BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780628|ref|YP_003065041.1| coproporphyrinogen III oxidase
[Candidatus Liberibacter asiaticus str. psy62]
         (395 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780628|ref|YP_003065041.1| coproporphyrinogen III oxidase [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040305|gb|ACT57101.1| coproporphyrinogen III oxidase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 395

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/395 (100%), Positives = 395/395 (100%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ
Sbjct: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN
Sbjct: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP
Sbjct: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ
Sbjct: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH
Sbjct: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER
Sbjct: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV
Sbjct: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395


>gi|315121829|ref|YP_004062318.1| coproporphyrinogen III oxidase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495231|gb|ADR51830.1| coproporphyrinogen III oxidase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 395

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/394 (76%), Positives = 351/394 (89%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           MKY  +Y +++    SN+LG+YVHWPFC KKCPYCDFNSHVRR  + Q +FI+S L EM+
Sbjct: 1   MKYSQSYGDDVVHPDSNTLGIYVHWPFCTKKCPYCDFNSHVRRRAIDQGHFIRSLLVEME 60

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           WMRQL+GPR ISS+FFGGGTPSLI+PQNI+++LD IAKNWT+ SNVEITIEANPSS E  
Sbjct: 61  WMRQLSGPRLISSVFFGGGTPSLIDPQNISILLDNIAKNWTLPSNVEITIEANPSSTEAG 120

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +F GYRKAGVNR+SLGVQSLEE++LRFLGRNHN SEA+ AIHLAR+IFPRMSFDLIYALP
Sbjct: 121 HFLGYRKAGVNRVSLGVQSLEERALRFLGRNHNVSEAVTAIHLARDIFPRMSFDLIYALP 180

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++ QWEMELQ+ALSYAVDHLSLYQLTIEKGTLFYK+HKDGDLVLP E+++ DLYNLTQ
Sbjct: 181 GQSIKQWEMELQKALSYAVDHLSLYQLTIEKGTLFYKLHKDGDLVLPDESLSADLYNLTQ 240

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            IT  +GL++YEISNH+ LG+ESLHNL YWRYGDY+GIGPGAHSRVKV S R+A+SIEKH
Sbjct: 241 IITREYGLYSYEISNHARLGSESLHNLTYWRYGDYVGIGPGAHSRVKVDSQRIAMSIEKH 300

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PE+W+KMV KNGHA+VEKEFLSSEQQADEFLMMG+RLREGI VKDWE LAGR+LDIECER
Sbjct: 301 PENWVKMVEKNGHAIVEKEFLSSEQQADEFLMMGMRLREGIEVKDWERLAGRSLDIECER 360

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            LQ QGFIER+  SRLRCTQ GM MLD+++A+L+
Sbjct: 361 RLQEQGFIERINSSRLRCTQLGMVMLDAIVADLS 394


>gi|209547615|ref|YP_002279532.1| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533371|gb|ACI53306.1| oxygen-independent coproporphyrinogen III oxidase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 401

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 225/385 (58%), Positives = 292/385 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL EM  +R L+GP++
Sbjct: 17  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFASAFLKEMAAVRALSGPKT 76

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V + +EIT+EANPSSVE   F+GYR AGV
Sbjct: 77  VTSIFLGGGTPSLMKPETVSAILDGIARHWHVPAGIEITMEANPSSVEAERFRGYRAAGV 136

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L+++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P QT+ QWE E
Sbjct: 137 NRVSLGVQALDDRDLKFLGRLHDVADALKAIRLARDIFPRMSFDLIYARPDQTVEQWERE 196

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 197 LKQAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITAREGMPA 256

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PESWL MV +
Sbjct: 257 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGPEKIATATERKPESWLDMVER 316

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR+LD + E  L    FIER
Sbjct: 317 DGHGILDEERLGYEEQSDELLLMGLRLREGVDLARWQQLSGRDLDPKREEFLLEHKFIER 376

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  SRLRCT  GM +LDSV+A+LA 
Sbjct: 377 IGNSRLRCTPSGMLILDSVVADLAC 401


>gi|116250146|ref|YP_765984.1| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254794|emb|CAK05868.1| putative oxygen-independent coprophorphyrinogen III oxidase
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 400

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 223/385 (57%), Positives = 291/385 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FLTEM  +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFTSAFLTEMAAVRSMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVSAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P+QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLARDIFPRMSFDLIYARPEQTVEEWEKE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKEAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSALLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGPEKLATATERKPETWLDMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR+LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGFEEQSDELLLMGLRLREGVDLARWQQLSGRDLDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  SRLRCT  GM +LDSV+A+LA 
Sbjct: 376 IGNSRLRCTPSGMLILDSVVADLAC 400


>gi|241202758|ref|YP_002973854.1| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856648|gb|ACS54315.1| oxygen-independent coproporphyrinogen III oxidase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 400

 Score =  498 bits (1283), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 223/385 (57%), Positives = 290/385 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FLTEM  +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFTSAFLTEMAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPEAVSAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLARDIFPRMSFDLIYARPDQTVEEWEKE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKEAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGPEKLATATERKPETWLDMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR+LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGFEEQSDELLLMGLRLREGVDLARWQQLSGRDLDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  SRLRCT  GM +LDSV+A+LA 
Sbjct: 376 IGNSRLRCTPSGMLILDSVVADLAC 400


>gi|150395235|ref|YP_001325702.1| coproporphyrinogen III oxidase [Sinorhizobium medicae WSM419]
 gi|150026750|gb|ABR58867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sinorhizobium medicae WSM419]
          Length = 381

 Score =  498 bits (1282), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 228/376 (60%), Positives = 286/376 (76%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC  KCPYCDFNSHVR   V Q  F+ +FL EM  +R L+GPR+++SIF GG
Sbjct: 5   FGVYVHWPFCAAKCPYCDFNSHVRHTPVEQPRFVAAFLKEMAAVRDLSGPRTVTSIFMGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++PQ +  ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGVNR+SLGVQ
Sbjct: 65  GTPSLMDPQTVEAILDGIARHWHVPDGIEITMEANPSSVEATRFRGYRAAGVNRVSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L ++ L+FLGR HN  +A+ AI LAR IFPRMSFDLIYA P QT+ +WE EL+ A+SYA
Sbjct: 125 ALNDRDLKFLGRLHNVEDALKAIRLAREIFPRMSFDLIYARPNQTVEEWERELKEAVSYA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ AYE+SNH+ 
Sbjct: 185 VDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITADIGMPAYEVSNHAR 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYGDY GIGPGAH R++VGS ++A + E++PE+WL+ V ++G  +VE+
Sbjct: 245 PGAESRHNLTYWRYGDYAGIGPGAHGRLQVGSGKIATATERNPEAWLQNVEEHGDGMVER 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           EFL  E QADE L+MGLRLREG+ +  W+ L+GRN D   E  L   GFIER+  SRLRC
Sbjct: 305 EFLDFEAQADELLLMGLRLREGVDLARWQSLSGRNPDPAREEFLIEHGFIERIGNSRLRC 364

Query: 379 TQRGMTMLDSVIANLA 394
           T  GM +LD+V+A+LA
Sbjct: 365 TPSGMLILDAVVADLA 380


>gi|222147319|ref|YP_002548276.1| coproporphyrinogen III oxidase [Agrobacterium vitis S4]
 gi|221734309|gb|ACM35272.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           vitis S4]
          Length = 393

 Score =  498 bits (1281), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 222/381 (58%), Positives = 284/381 (74%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G    G+Y+HWPFC  KCPYCDFNSHVR  K+ Q  F Q+FL EM+ MR ++GP++++SI
Sbjct: 13  GEPGFGIYIHWPFCAAKCPYCDFNSHVRHQKIDQPRFTQAFLKEMETMRAMSGPKTVTSI 72

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++P  +  IL+GIA+ WTV   +EIT+EANP+SVE   F+GYR AGVNR+S
Sbjct: 73  FLGGGTPSLMDPATVGAILEGIARYWTVPRGIEITMEANPTSVEAERFRGYRSAGVNRVS 132

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+L +  L+FLGR H+  +A+ A+ LAR IFPRMSFDLIYA P QT+  W+ EL+ A
Sbjct: 133 LGVQALNDADLKFLGRMHSVEDALKAVRLAREIFPRMSFDLIYARPNQTIADWDAELKLA 192

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +SYAVDHLSLYQLTIE+GT F+ +HK G ++ P E  A  LY  TQ IT   GL AYE+S
Sbjct: 193 ISYAVDHLSLYQLTIEEGTPFFGLHKAGKIITPDEEHAAQLYEATQEITEREGLPAYEVS 252

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + EKHPE+WL  V +NGH 
Sbjct: 253 NHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGHEKLATATEKHPETWLSAVEQNGHG 312

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           +V ++ L SE+QADE L+MGLRLREG+ +  W+ L+GR+ D   E+ L   GFIER+  S
Sbjct: 313 MVIQDALGSEEQADELLLMGLRLREGVDLARWQQLSGRDPDPVREQFLLEHGFIERLGNS 372

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           RLRCT +GM +LD+V+A+LA 
Sbjct: 373 RLRCTPKGMLVLDAVVADLAC 393


>gi|159184259|ref|NP_353357.2| coproporphyrinogen III oxidase [Agrobacterium tumefaciens str. C58]
 gi|159139586|gb|AAK86142.2| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           tumefaciens str. C58]
          Length = 399

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 223/381 (58%), Positives = 287/381 (75%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G    G+Y+HWPFC  KCPYCDFNSHVR   V QE F  +FL EM+ MR L+GPR ++SI
Sbjct: 19  GDPGFGIYLHWPFCAAKCPYCDFNSHVRHRPVDQERFTAAFLREMEHMRTLSGPRVVTSI 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++PQ +  +LDGI++ W V   +EIT+EANPSSVE   F+GYR AGVNR+S
Sbjct: 79  FMGGGTPSLMDPQTVGALLDGISRFWHVPDGIEITMEANPSSVEAERFRGYRAAGVNRVS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +W+ EL+ A
Sbjct: 139 LGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPNQTVAEWDAELKEA 198

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT  +G+ AYE+S
Sbjct: 199 VSYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEHSAVLYEATQEITERYGMPAYEVS 258

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+  G+ ++A + E+HPE+WL+ V + GH 
Sbjct: 259 NHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGASKLATATERHPETWLETVEREGHG 318

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           +V++E L  ++QADE L+MGLRLREGI +  W  L+GR+LD E E  L + GF+ER+  S
Sbjct: 319 MVDQELLGVDEQADELLLMGLRLREGIDLARWSDLSGRDLDPEKEEFLLQHGFVERLGNS 378

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           RLRCT  GM +LD+V+A+LA 
Sbjct: 379 RLRCTPSGMLILDAVVADLAC 399


>gi|222084654|ref|YP_002543183.1| coproporphyrinogen III oxidase protein [Agrobacterium radiobacter
           K84]
 gi|221722102|gb|ACM25258.1| coproporphyrinogen III oxidase protein [Agrobacterium radiobacter
           K84]
          Length = 392

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 222/380 (58%), Positives = 285/380 (75%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL EM  MR + GP++++SI
Sbjct: 12  GEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFTAAFLKEMASMRAIGGPKTVTSI 71

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++P+ +  +LDGIAK+W V   +EIT+EANPSSVE   F+GYR AGVNR+S
Sbjct: 72  FLGGGTPSLMKPETVGAVLDGIAKHWHVPDGIEITMEANPSSVEAERFRGYRAAGVNRVS 131

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQ+L ++ L+FLGR HN ++A+ AI LAR+IFPRMSFDLIYA P QT+ +WE EL+ A
Sbjct: 132 MGVQALNDRDLKFLGRLHNVADALKAIKLARDIFPRMSFDLIYARPNQTVEEWERELKEA 191

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +SYAVDHLSLYQLTIE+GT FY +HK G L++P  + +  LY  TQ IT   G+ AYE+S
Sbjct: 192 ISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGDQSALLYEATQEITEREGMPAYEVS 251

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+ +G  ++A + E+ PE+WL++V ++GH 
Sbjct: 252 NHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTLGPKKLATATERKPEAWLELVERDGHG 311

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           + ++E L  ++QADE L+MGLRL+EGI +  W+ L+GR  D   E  L   GFIER+  S
Sbjct: 312 IADQEMLGDDEQADELLLMGLRLKEGIDLVRWQQLSGREPDQAREEFLLEHGFIERLGNS 371

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLRCT  GM +LDSV+A+LA
Sbjct: 372 RLRCTPAGMLILDSVVADLA 391


>gi|325291759|ref|YP_004277623.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
 gi|325059612|gb|ADY63303.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
          Length = 399

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 222/380 (58%), Positives = 285/380 (75%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G    G+Y+HWPFC  KCPYCDFNSHVR   V QE F  +FL+EM  MR L+GPR ++SI
Sbjct: 19  GDPGFGIYLHWPFCAAKCPYCDFNSHVRHRPVDQERFTAAFLSEMAKMRALSGPRVVTSI 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++PQ +  +LDG+++ W V   +EIT+EANPSSVE   F+GYR AGVNR+S
Sbjct: 79  FMGGGTPSLMDPQTVGALLDGVSRFWHVPDGIEITMEANPSSVEAERFRGYRAAGVNRVS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +W+ EL+ A
Sbjct: 139 LGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPNQTVAEWDAELKEA 198

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT  +G+ AYE+S
Sbjct: 199 VSYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEHSAVLYEATQEITERYGMPAYEVS 258

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+  G+ ++A   E+HPE+WL+ V + GH 
Sbjct: 259 NHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTNGASKLATVTERHPETWLETVEREGHG 318

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           +V++E L  ++QADE L+MGLRLREGI +  W  L+GR LD E E  L + GF+ER+  S
Sbjct: 319 MVDQELLGVDEQADELLLMGLRLREGIDLARWSDLSGRELDPEKEEFLLQHGFVERIGNS 378

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLRCT  GM +LD+V+A+LA
Sbjct: 379 RLRCTPSGMLILDAVVADLA 398


>gi|190890029|ref|YP_001976571.1| oxygen-independent coprophorphyrinogen III oxidase [Rhizobium etli
           CIAT 652]
 gi|190695308|gb|ACE89393.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
          Length = 400

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 222/385 (57%), Positives = 287/385 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKETAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVAAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPDQTVEEWESE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKQAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGREKIATATERKPEAWLDMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGHEEQSDELLLMGLRLREGVDLARWQQLSGRELDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  SRLRCT  GM +LDSV+A+LA 
Sbjct: 376 IGNSRLRCTPSGMLILDSVVADLAC 400


>gi|86356017|ref|YP_467909.1| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|86280119|gb|ABC89182.1| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 400

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 221/385 (57%), Positives = 289/385 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL EM  +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKEMAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V + +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVSAILDGIARHWHVPAGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPDQTVDEWEKE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT F+ +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKEAISYAVDHLSLYQLTIEEGTPFFGLHKSGKLIVPDGEQSALLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL+MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGHEKLATATERKPEAWLEMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGFEEQSDELLLMGLRLREGVDLARWQQLSGRELDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  SRLRCT  GM +LDSV+A+LA 
Sbjct: 376 IGNSRLRCTSAGMLILDSVVADLAC 400


>gi|227820594|ref|YP_002824564.1| coproporphyrinogen III oxidase [Sinorhizobium fredii NGR234]
 gi|227339593|gb|ACP23811.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sinorhizobium fredii NGR234]
          Length = 382

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 224/376 (59%), Positives = 284/376 (75%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC  KCPYCDFNSHVR   V Q  F+ +FL EM  +  L+GPR+++SIF GG
Sbjct: 5   FGVYVHWPFCAAKCPYCDFNSHVRHQPVDQPRFVAAFLQEMASVGALSGPRTVTSIFMGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  +A ILDGIA++W V   +EIT+EANPSSVE   F GYR AGVNR+SLGVQ
Sbjct: 65  GTPSLMEPATVAAILDGIARHWHVPDGIEITMEANPSSVEATRFHGYRAAGVNRVSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L ++ L+FLGR HN  +A+ A+ LAR IFPRMSFDLIYA PKQT+ +WE EL+ A+SYA
Sbjct: 125 ALNDRDLKFLGRLHNVEDALKAVRLAREIFPRMSFDLIYARPKQTVEEWERELKEAVSYA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDHLSLYQLTIE+GT F+ +HK G L++P    +  LY  TQ IT+A G+ AYE+SNH+ 
Sbjct: 185 VDHLSLYQLTIEEGTPFFGLHKAGKLIVPDGEQSAVLYEATQEITAAIGMPAYEVSNHAR 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYGDY GIGPGAH R+  GS ++A + E++PE+WL++V + G  + E+
Sbjct: 245 RGAESRHNLTYWRYGDYAGIGPGAHGRLTAGSGKIATATERNPEAWLRLVEERGDGITEQ 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  E QADE L+MGLRLREG+ +  W+ L+GR+ D E E+ L   GF+ER+  SRLRC
Sbjct: 305 EPLDREAQADELLLMGLRLREGVDLARWQGLSGRDPDPEREQFLIEHGFVERLGNSRLRC 364

Query: 379 TQRGMTMLDSVIANLA 394
           T  GM +LD+V+A+LA
Sbjct: 365 TPAGMLILDAVVADLA 380


>gi|15964126|ref|NP_384479.1| coproporphyrinogen III oxidase [Sinorhizobium meliloti 1021]
 gi|307301271|ref|ZP_07581033.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
 gi|307317942|ref|ZP_07597379.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti AK83]
 gi|15073302|emb|CAC41810.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sinorhizobium meliloti 1021]
 gi|306896344|gb|EFN27093.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti AK83]
 gi|306903727|gb|EFN34314.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
          Length = 393

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/391 (58%), Positives = 286/391 (73%), Gaps = 4/391 (1%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LSA  + M        GVYVHWPFC  KCPYCDFNSHVR   V Q  F+ +FL EM  +R
Sbjct: 6   LSAIGDGM----DPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQPRFVAAFLKEMAAVR 61

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L+GPR+++SIF GGGTPSL++P+ +  ILDGIA+ W V   +EIT+EANPSSVE   F+
Sbjct: 62  ALSGPRTVTSIFMGGGTPSLMDPRTVEAILDGIARQWHVPDGIEITMEANPSSVEATRFR 121

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           GYR AGVNR+SLGVQ+L ++ L+FLGR H+   A+ AI LAR IFPRMSFDLIYA P QT
Sbjct: 122 GYRAAGVNRVSLGVQALNDRDLKFLGRLHDVENALKAIRLAREIFPRMSFDLIYARPNQT 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +WE EL+ A+SYAVDHLSLYQLTIE+GT FY +HK G LV+P    +  LY  TQ IT
Sbjct: 182 VEEWERELKEAVSYAVDHLSLYQLTIEEGTPFYGLHKAGKLVVPDGEQSAVLYEATQEIT 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +  G+ AYE+SNH+  GAES HNL YWRYGDY GIGPGAH R+ +GS ++A + E++PE+
Sbjct: 242 ADIGMPAYEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLAIGSGKIATATERNPEA 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           WL+ V + G  +VE+E L  E QADE L+MGLRLREG+ +  W+ L+GR+ D   E  L 
Sbjct: 302 WLQRVEECGEGLVERELLDFEAQADELLLMGLRLREGVDLARWQTLSGRDPDPAREEFLI 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             GFIER+  SRLRCT  GM +LD+V+A+LA
Sbjct: 362 EHGFIERIGNSRLRCTPAGMLILDAVVADLA 392


>gi|163757814|ref|ZP_02164903.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
 gi|162285316|gb|EDQ35598.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
          Length = 414

 Score =  471 bits (1213), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 211/381 (55%), Positives = 275/381 (72%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G     VY+HWPFC  KCPYCDFNSHVR   + Q+ +I +F  E+  MR+L+GP+ ++SI
Sbjct: 34  GKPGFAVYLHWPFCAAKCPYCDFNSHVRHEGIDQQAYIDAFRAEIAAMRKLSGPQVVTSI 93

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P+ +A ILD + + W V   +EIT+EANPSSVE   F+GYR AGVNR+S
Sbjct: 94  FFGGGTPSLMHPETVAAILDAVHETWVVPEGIEITLEANPSSVEAGRFRGYRAAGVNRVS 153

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQ+L ++ L+ LGR H+ +EA+ AI LAR+IFPRMSFDLIYA P QT   WE EL+ A
Sbjct: 154 MGVQALNDRDLKRLGRLHDRAEALRAIGLARDIFPRMSFDLIYARPDQTPHAWEAELKEA 213

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S A DHLSLYQLTIE+GT FY +HK G L++P  +++ +LY LTQS+  AHGL AYE+S
Sbjct: 214 ISLAADHLSLYQLTIEEGTPFYGLHKAGKLIVPDGDLSAELYELTQSVCEAHGLPAYEVS 273

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+   + ++A + E+ PE+WL  V   GH 
Sbjct: 274 NHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTTSAGKIATATERTPETWLTSVADRGHG 333

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           + E E L + +QADE L+MGLRLREG+ +  W+ L+G  LD E    L   G IE +   
Sbjct: 334 MSESEVLGTSEQADELLLMGLRLREGVDLGRWQALSGHRLDAERVEFLIDHGMIETMGKD 393

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+RCT +GM +LD+V+A+LA 
Sbjct: 394 RIRCTPQGMLVLDAVVADLAT 414


>gi|239831022|ref|ZP_04679351.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
 gi|239823289|gb|EEQ94857.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
          Length = 409

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 211/381 (55%), Positives = 273/381 (71%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G ++ GVY+HWPFC+ KCPYCDFNSHVR   V Q  F ++FL EM+ +R+ TGPR+I+SI
Sbjct: 29  GEDAFGVYLHWPFCLAKCPYCDFNSHVRHKPVDQARFSEAFLREMECLRERTGPRTITSI 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++P+ +  +LDGIA +W+V+ ++E+T+EANP+SVE + F+GYR AGVNR+S
Sbjct: 89  FLGGGTPSLMQPETVGALLDGIASHWSVAPDIEVTLEANPTSVEADRFRGYRAAGVNRVS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+L +  LR LGR H+  EA AAI LAR IFPR+SFDLIYA P QT+  W  EL+ A
Sbjct: 149 LGIQALNDPDLRRLGRMHSVEEAKAAIRLAREIFPRLSFDLIYARPNQTIEAWREELKEA 208

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A DHLSLYQLTIE+GT FY + K G L  P  + A  LY  TQ +T+ HGL AYEIS
Sbjct: 209 IGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPDPDHAAALYEETQRVTAEHGLPAYEIS 268

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  G ES HNL YWRYG Y+GIGPGAH R      R     EKHPE+WL  V +NGH 
Sbjct: 269 NHAVPGRESQHNLVYWRYGQYVGIGPGAHGRFVENDVRTVTMTEKHPETWLDKVERNGHG 328

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           ++E+E+L  EQ+ DEFLMMGLRLREGI +  +E L+G  +D +    L  +G IE +  S
Sbjct: 329 IIEEEYLDGEQEGDEFLMMGLRLREGIDLARYERLSGHAVDEKRLAKLIAEGMIEPMDGS 388

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T  G  +LD+++A+LA 
Sbjct: 389 FIRATPDGALVLDALVADLAA 409


>gi|110636337|ref|YP_676545.1| coproporphyrinogen III oxidase [Mesorhizobium sp. BNC1]
 gi|110287321|gb|ABG65380.1| coproporphyrinogen III oxidase, anaerobic [Chelativorans sp. BNC1]
          Length = 387

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/376 (56%), Positives = 267/376 (71%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MR  TGPRS+SSIF GG
Sbjct: 11  FGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFKRELAAMRARTGPRSVSSIFLGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P+ +  I+D +A +W V   VEIT+EANPSSVE + F+GYR AGVNR+S+G+Q
Sbjct: 71  GTPSLMDPKTVGAIIDAVAASWHVPMGVEITLEANPSSVEADRFRGYRSAGVNRVSMGIQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L ++ LRFLGR HN  EA+ AI LAR++FPRMSFDLIYA P QT+  W  EL+ A+ YA
Sbjct: 131 ALNDRDLRFLGRLHNVEEALGAIRLARDLFPRMSFDLIYARPGQTVDAWRAELEEAVGYA 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT FY +   G L +P  ++A DLY +TQ IT+A GL AYEISNH+ 
Sbjct: 191 ADHLSLYQLTIEEGTPFYALRAAGKLTVPDMDLAADLYQVTQEITAARGLPAYEISNHAK 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y+G+GPGAH R      RV    E++PE+W  +V   G  V   
Sbjct: 251 PGAESRHNLIYWRYGEYVGVGPGAHGRFIEDGRRVVTMTERNPETWAALVEARGSGVTGG 310

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+  ++ADEFL+MGLRL EGI +  +E LAG  L  +    L+ +G IE V  SRLR 
Sbjct: 311 EMLTRSEEADEFLLMGLRLVEGIDLDRYEKLAGFPLSPQRVAILREEGLIEPVGNSRLRA 370

Query: 379 TQRGMTMLDSVIANLA 394
           T  GM +LD+++A+LA
Sbjct: 371 TPAGMVVLDALVADLA 386


>gi|153007530|ref|YP_001368745.1| coproporphyrinogen III oxidase [Ochrobactrum anthropi ATCC 49188]
 gi|151559418|gb|ABS12916.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ochrobactrum anthropi ATCC 49188]
          Length = 409

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 210/381 (55%), Positives = 272/381 (71%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G N+ GVY+HWPFC+ KCPYCDFNSHVR   V Q  F ++FL EM+ +R+ TGPR+I+SI
Sbjct: 29  GENAFGVYLHWPFCLAKCPYCDFNSHVRHKPVDQARFSEAFLREMETLRERTGPRTITSI 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++P+ +  +L+GIA +W+V+ ++E+T+EANP+SVE + F+GYR AGVNR+S
Sbjct: 89  FLGGGTPSLMQPETVGALLNGIASHWSVAPDIEVTLEANPTSVEADRFRGYRAAGVNRVS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+L +  LR LGR H+  EA AAI LAR IFPR+SFDLIYA P QT+  W  EL+ A
Sbjct: 149 LGIQALNDPDLRRLGRMHSVEEAKAAIRLAREIFPRLSFDLIYARPNQTIEAWREELKEA 208

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A DHLSLYQLTIE+GT FY + K G L  P  + A  LY  TQ +T+ HGL AYEIS
Sbjct: 209 IGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDHAAALYEETQRVTAEHGLPAYEIS 268

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  G ES HNL YWRYG Y+GIGPGAH R      R     EKHPE+WL  V +NGH 
Sbjct: 269 NHAVPGRESQHNLVYWRYGQYVGIGPGAHGRFVENDIRTVTMTEKHPETWLDKVERNGHG 328

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           ++E+E+L   Q+ DEFLMMGLRLREGI +  +E L+G  +D +    L  +G IE +  S
Sbjct: 329 IIEEEYLDGGQEGDEFLMMGLRLREGIDLARYERLSGHAVDEKRLAKLIAEGMIEPMSGS 388

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T  G  +LD+++A+LA 
Sbjct: 389 IIRATPDGALVLDALVADLAA 409


>gi|114705080|ref|ZP_01437988.1| coproporphyrinogen III oxidase [Fulvimarina pelagi HTCC2506]
 gi|114539865|gb|EAU42985.1| coproporphyrinogen III oxidase [Fulvimarina pelagi HTCC2506]
          Length = 400

 Score =  455 bits (1170), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/376 (56%), Positives = 269/376 (71%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC  KCPYCDFNSHVR   V Q  +  +F  E+  M + +    ++SIF GG
Sbjct: 25  FGVYVHWPFCAAKCPYCDFNSHVRMKPVDQARYAAAFERELAEMGRRSKGERVTSIFLGG 84

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  + +IL+ I+  WTV+ + EIT+EANPSSVE N F+GYR AGVNR+SLGVQ
Sbjct: 85  GTPSLMEPATVGIILNAISNIWTVAPDAEITLEANPSSVEANRFRGYRSAGVNRVSLGVQ 144

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L ++ LR LGR H+  EA+ AI LAR IFPR+SFDLIYA P QT+  WE EL RA+  A
Sbjct: 145 ALNDRDLRRLGRLHDVEEALRAIGLAREIFPRLSFDLIYARPDQTVAGWEAELARAIDLA 204

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT F+ +HK G L++P  +++ DLY  TQ++T+A GL AYEISNH+ 
Sbjct: 205 ADHLSLYQLTIEEGTAFHALHKAGKLIVPDGDLSADLYEATQALTAAKGLPAYEISNHAV 264

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG Y G+GPGAH R+    +R A + E  PE+WL+MV    H +V +
Sbjct: 265 PGAESRHNLTYWRYGHYAGVGPGAHGRLSWDGYRYATANEALPETWLQMVEDWDHGMVVE 324

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS  +QADE L+MGLRL EG+ +K W  L+GR +D   ER+L   G +ER+   RLRC
Sbjct: 325 EALSIAEQADELLLMGLRLAEGVDLKRWRELSGRVIDPRSERDLVENGMVERLGPERLRC 384

Query: 379 TQRGMTMLDSVIANLA 394
           T  GM +LD+V+A+LA
Sbjct: 385 TPAGMMVLDAVVADLA 400


>gi|13473883|ref|NP_105451.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14024634|dbj|BAB51237.1| oxygen-independent coproporphyrinogen III oxidase; HemN
           [Mesorhizobium loti MAFF303099]
          Length = 392

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/391 (54%), Positives = 269/391 (68%), Gaps = 7/391 (1%)

Query: 11  MTGQG-------SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           MTG G       S   GVY+HWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MR
Sbjct: 1   MTGPGMTMPLDRSPGFGVYIHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMR 60

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           + TGPR ++SIF GGGTPSL++P+ +A +LD +AKNWTV   +E+T+EANPSSVE   F+
Sbjct: 61  ERTGPREVTSIFLGGGTPSLMKPETVARVLDAVAKNWTVPDGIEVTLEANPSSVEAERFR 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           GYR AGVNR+SLGVQ+L ++ LRFLGR HN  EA+ AI LAR IFPR+SFDLIYA P QT
Sbjct: 121 GYRAAGVNRVSLGVQALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W  EL++A+ +A DHLSLYQLTIE+GT F+ +H     ++P  + A DLY LTQ  T
Sbjct: 181 PEAWAAELEQAIGHAADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQETT 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           SAHGL AYEISNH+  GAES HNL YWRYG+Y+G+GPGAH R      R     E+ PE+
Sbjct: 241 SAHGLPAYEISNHARPGAESRHNLTYWRYGEYVGVGPGAHGRFVEHGRRTVTIAERMPET 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W  +V   GH V   E L+  ++ADEFL+MGLRL EGI +  +E  +GR L       LQ
Sbjct: 301 WANLVEAKGHGVTGGEILTRSEEADEFLLMGLRLAEGIDLARYEAFSGRGLSSARLSVLQ 360

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +G +  +  +RLR T  GM +LD+V+A+LA
Sbjct: 361 GEGLVAPIGNARLRATPAGMIVLDAVVADLA 391


>gi|260463465|ref|ZP_05811665.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259030790|gb|EEW32066.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 385

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/379 (55%), Positives = 267/379 (70%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVY+HWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MRQ TGPR ++SIF
Sbjct: 6   APGFGVYIHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMRQRTGPREVTSIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P+ +A +LD +A+NWTV   +E+T+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 66  FGGGTPSLMKPETVARVLDAVARNWTVPDGIEVTLEANPSSVEAERFRGYRTAGVNRVSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ LRFLGR HN  EA+ AI LAR IFPR+SFDLIYA P QT   W  EL++A+
Sbjct: 126 GVQALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQTPEAWASELEQAI 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +A DHLSLYQLTIE+GT F+ +H     ++P  + A DLY LTQ IT+AHGL AYEISN
Sbjct: 186 GHAADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQEITTAHGLPAYEISN 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG+Y+G+GPGAH R      R     E+ PE+W  +V   GH +
Sbjct: 246 HARPGAESRHNLTYWRYGEYVGVGPGAHGRFVEHGRRTVTIAERMPETWANLVEAKGHGI 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E L+  ++ADEFL+MGLRL EGI +  +E  +GR L       LQ +G +  +  +R
Sbjct: 306 TGGEILTRSEEADEFLLMGLRLAEGIDLSRYEAFSGRGLSSARLSVLQGEGLVAPIGNTR 365

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T  GM +LD+V+A+LA
Sbjct: 366 LRATPAGMIVLDAVVADLA 384


>gi|90420652|ref|ZP_01228558.1| oxygen-independent coproporphyrinogen III oxidase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90334943|gb|EAS48704.1| oxygen-independent coproporphyrinogen III oxidase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 398

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/379 (55%), Positives = 264/379 (69%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVHWPFC  KCPYCDFNSHVR   V QE +  +F  E+  M + +   +++SIF
Sbjct: 20  APGFGVYVHWPFCAAKCPYCDFNSHVRHKPVDQERYAAAFERELAEMARRSAGETVTSIF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EP  +  ILD +A NWT++   EIT+EANPSSVE   F+GYR+AGVNR+SL
Sbjct: 80  LGGGTPSLMEPATVRRILDAVAANWTIADGAEITLEANPSSVEAERFRGYREAGVNRVSL 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ LR LGR H+  +A+ AI LAR IFPR+SFDLIYA P QT+  WE EL +A+
Sbjct: 140 GVQALNDRDLRLLGRLHSVDQALHAIGLAREIFPRLSFDLIYARPDQTVAAWESELNQAI 199

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT FY +HK G L++P  +++ DLY  TQ IT+  GL AYEISN
Sbjct: 200 DLAADHLSLYQLTIEEGTPFYALHKAGKLIVPDGDLSADLYESTQRITAERGLPAYEISN 259

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG Y G+GPGAH R+     R AIS E  PE+WLKMV       
Sbjct: 260 HAVPGAESRHNLTYWRYGLYAGVGPGAHGRLMGPGGRHAISNEPLPETWLKMVESWDSGA 319

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           V  + LS  +QADE L+MGLRL EGI +K W  L GR+LD   E +L   G +ER+   R
Sbjct: 320 VVDDLLSPTEQADELLLMGLRLTEGIDLKRWRKLTGRDLDPVSEADLMAHGMVERLGPDR 379

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T  GM +LD+V+A+LA
Sbjct: 380 LRATPAGMLVLDAVVADLA 398


>gi|319780508|ref|YP_004139984.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166396|gb|ADV09934.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/379 (55%), Positives = 267/379 (70%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVHWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MR+ TGPR ++S+F
Sbjct: 8   TPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMRERTGPREVTSVF 67

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL++P+ +A +LD +AKNWTV + +E+T+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 68  LGGGTPSLMKPETVARVLDAVAKNWTVPAGIEVTLEANPSSVEAERFRGYRAAGVNRVSL 127

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ LRFLGR HN  EA+ AI LAR IFPR+SFDLIYA P QT   W  EL++A+
Sbjct: 128 GVQALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQTPEAWASELEQAI 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +A DHLSLYQLTIE+GT F+ +H     ++P  + A DLY LTQ IT+AHGL AYEISN
Sbjct: 188 GHAADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQEITTAHGLPAYEISN 247

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG+Y+G+GPGAH R      R     E+ PE+W  +V   GH V
Sbjct: 248 HARPGAESRHNLTYWRYGEYVGVGPGAHGRFVENGRRTVTIAERMPETWANLVEAKGHGV 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E L+  ++ADEFL+MGLRL EGI +  +E  +GR L       LQ +G +  +  +R
Sbjct: 308 TGGEILTRSEEADEFLLMGLRLAEGIDLARYEAFSGRGLSSARLSMLQGEGLVAPIGNAR 367

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T  GM +LD+V+A+LA
Sbjct: 368 LRATAAGMIVLDAVVADLA 386


>gi|148560210|ref|YP_001258208.1| coproporphyrinogen III oxidase [Brucella ovis ATCC 25840]
 gi|161618164|ref|YP_001592051.1| coproporphyrinogen III oxidase [Brucella canis ATCC 23365]
 gi|163842445|ref|YP_001626849.1| coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|254700981|ref|ZP_05162809.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|254707135|ref|ZP_05168963.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|254709322|ref|ZP_05171133.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|260567187|ref|ZP_05837657.1| coproporphyrinogen III oxidase [Brucella suis bv. 4 str. 40]
 gi|261314611|ref|ZP_05953808.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261316833|ref|ZP_05956030.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261751502|ref|ZP_05995211.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261756066|ref|ZP_05999775.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|265987903|ref|ZP_06100460.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|294851575|ref|ZP_06792248.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|306844443|ref|ZP_07477033.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO1]
 gi|148371467|gb|ABQ61446.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella ovis ATCC 25840]
 gi|161334975|gb|ABX61280.1| oxygen-independent coproporphyrinogen III oxidase [Brucella canis
           ATCC 23365]
 gi|163673168|gb|ABY37279.1| Coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|260156705|gb|EEW91785.1| coproporphyrinogen III oxidase [Brucella suis bv. 4 str. 40]
 gi|261296056|gb|EEX99552.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261303637|gb|EEY07134.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261741255|gb|EEY29181.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261745819|gb|EEY33745.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|264660100|gb|EEZ30361.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|294820164|gb|EFG37163.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|306275256|gb|EFM57006.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO1]
          Length = 404

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|254705352|ref|ZP_05167180.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|256030845|ref|ZP_05444459.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
          Length = 397

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 13  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 73  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 133 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 193 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 253 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 313 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 373 MGGSLIRATPDGALVLDALVADLAA 397


>gi|23501087|ref|NP_697214.1| coproporphyrinogen III oxidase [Brucella suis 1330]
 gi|256368640|ref|YP_003106146.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|23346956|gb|AAN29129.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Brucella suis 1330]
 gi|255998798|gb|ACU47197.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
          Length = 385

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 1   MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 121 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 181 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 241 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 301 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 361 MGGSLIRATPDGALVLDALVADLAA 385


>gi|17988054|ref|NP_540688.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|225851708|ref|YP_002731941.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256045966|ref|ZP_05448838.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112679|ref|ZP_05453600.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|256264780|ref|ZP_05467312.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|260563249|ref|ZP_05833735.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|265992378|ref|ZP_06104935.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994121|ref|ZP_06106678.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|17983802|gb|AAL52952.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella
           melitensis bv. 1 str. 16M]
 gi|225640073|gb|ACN99986.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|260153265|gb|EEW88357.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|262765102|gb|EEZ11023.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003444|gb|EEZ15737.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263095189|gb|EEZ18858.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326408199|gb|ADZ65264.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
 gi|326537914|gb|ADZ86129.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis M5-90]
          Length = 404

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEMTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|256060315|ref|ZP_05450488.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261324290|ref|ZP_05963487.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261300270|gb|EEY03767.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
          Length = 404

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKLVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|254501285|ref|ZP_05113436.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Labrenzia alexandrii DFL-11]
 gi|222437356|gb|EEE44035.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Labrenzia alexandrii DFL-11]
          Length = 394

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 201/385 (52%), Positives = 272/385 (70%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +T       G+YVHWPFC  KCPYCDFNSHVR  +V Q  F  +F  E+    ++T  + 
Sbjct: 10  LTQASDAGFGIYVHWPFCAAKCPYCDFNSHVRHQQVDQARFAAAFERELNHFAEMTQGKV 69

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+F GGGTPSL+EP  +  +L  I+  W++ SNVEI++EANP+SVE   F+GYR AGV
Sbjct: 70  VQSVFLGGGTPSLMEPATVERVLTAISDRWSMDSNVEISLEANPTSVEAERFKGYRAAGV 129

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQSL +  L+ LGR H+A+ A  AI  AR  FPR+SFDLIYA P QT+ QWE E
Sbjct: 130 NRVSLGVQSLHDADLKLLGRLHDAATARRAIETARATFPRLSFDLIYARPNQTLAQWEAE 189

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A++ A DHLSLYQLTIE+GT FY ++  G L +P +++  + Y LTQ +T A GL A
Sbjct: 190 LKDAIALAADHLSLYQLTIEEGTPFYTLYHGGKLTMPDQDLGAEFYELTQKVTEAEGLPA 249

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAE  HNL YWRYGDY+G+GPGAH R+ VG +R+A S+E+HPE+WL+ V +
Sbjct: 250 YEVSNHAKPGAECRHNLVYWRYGDYVGVGPGAHGRLSVGVNRMATSVERHPETWLEAVEQ 309

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           NGH ++E   L+ E+Q DEFL+MGLRL EGI +K +E  A R++D +   +L   G +E 
Sbjct: 310 NGHGMIEFSGLNEEEQGDEFLLMGLRLTEGIDLKRYEAFAHRSVDPKRLNDLLEHGMVEE 369

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  +R+R T+ G  +LD+V+A+LA 
Sbjct: 370 LGENRVRATREGFFVLDAVVADLAA 394


>gi|225626714|ref|ZP_03784753.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
 gi|256158874|ref|ZP_05456728.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|256254251|ref|ZP_05459787.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|260169749|ref|ZP_05756560.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|261221402|ref|ZP_05935683.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261759290|ref|ZP_06002999.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|265997364|ref|ZP_06109921.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|225618371|gb|EEH15414.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
 gi|260919986|gb|EEX86639.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261739274|gb|EEY27270.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|262551832|gb|EEZ07822.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
          Length = 404

 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL  
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPV 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|62289151|ref|YP_220944.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|189023427|ref|YP_001934195.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|237814644|ref|ZP_04593642.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|254690478|ref|ZP_05153732.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254696598|ref|ZP_05158426.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731511|ref|ZP_05190089.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260546450|ref|ZP_05822190.1| coproporphyrinogen III oxidase [Brucella abortus NCTC 8038]
 gi|260756032|ref|ZP_05868380.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260759256|ref|ZP_05871604.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260760979|ref|ZP_05873322.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260885052|ref|ZP_05896666.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|297247567|ref|ZP_06931285.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|62195283|gb|AAX73583.1| oxygen-independent coproporphyrinogen III oxidase, hypothetical
           [Brucella abortus bv. 1 str. 9-941]
 gi|189018999|gb|ACD71721.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|237789481|gb|EEP63691.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|260096557|gb|EEW80433.1| coproporphyrinogen III oxidase [Brucella abortus NCTC 8038]
 gi|260669574|gb|EEX56514.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260671411|gb|EEX58232.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676140|gb|EEX62961.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260874580|gb|EEX81649.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|297174736|gb|EFH34083.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 404

 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIY  P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYVRPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|256258734|ref|ZP_05464270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
          Length = 397

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 13  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 73  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIY  P QT+  W  E
Sbjct: 133 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYVRPDQTIEAWREE 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 193 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 253 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 313 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 373 MGGSLIRATPDGALVLDALVADLAA 397


>gi|121602251|ref|YP_989584.1| coproporphyrinogen III oxidase [Bartonella bacilliformis KC583]
 gi|120614428|gb|ABM45029.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bartonella bacilliformis KC583]
          Length = 392

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/389 (54%), Positives = 270/389 (69%), Gaps = 15/389 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR   V Q++F+++F  EM       GPR I+SIF GG
Sbjct: 5   FGIYIHWPFCTAKCPYCDFNSHVRVKGVNQQHFVKAFEREMTTQYHEIGPRHITSIFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  +L  +AKNWT+   +EIT+EANPSSVE   F GYR AGVNR+SLGVQ
Sbjct: 65  GTPSLMTPHTVDALLQSVAKNWTIDDKIEITLEANPSSVEAERFHGYRTAGVNRLSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +++L+ LGR H+  +A+ AI+LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+  A
Sbjct: 125 ALNDKALQQLGRLHDVKQALHAINLARKIFPRLSFDLIYARPEQTLKQWKDELLQAIDLA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIEKGT F ++H +G L+LP   +A DLYNLTQ IT+ HGL AYEISNH+ 
Sbjct: 185 ADHLSLYQLTIEKGTAFKRLHAEGKLILPEPELAADLYNLTQEITALHGLPAYEISNHAI 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI-------------EKHPESWL 305
            GAES HNL YWRY +Y G GPGAH R     H +A+S              EKHPE WL
Sbjct: 245 SGAESRHNLLYWRYHEYAGFGPGAHGRFT--KHSLALSERPSSQQTRHVTINEKHPERWL 302

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           K+V   GH  +E E L+ EQQADE L+MGLRL EG  +  +E L+ +++  E   NLQ+Q
Sbjct: 303 KLVDTKGHGCIETEELTGEQQADEMLLMGLRLSEGFDLTRYETLSTKSVSSEKLTNLQQQ 362

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G +E +   RL+ T+ G  +LD +I+ LA
Sbjct: 363 GLVEMIDNQRLKVTKTGRILLDHIISQLA 391


>gi|82699090|ref|YP_413664.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|82615191|emb|CAJ10132.1| Putative oxygen-independent coproporphyrinogen III
           oxidase:Elongator protein 3/MiaB/NifB:Radical SAM
           [Brucella melitensis biovar Abortus 2308]
          Length = 385

 Score =  448 bits (1152), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 1   MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIY  P QT+  W  E
Sbjct: 121 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYVRPDQTIEAWREE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 181 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 241 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 301 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 361 MGGSLIRATPDGALVLDALVADLAA 385


>gi|254718390|ref|ZP_05180201.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|265983354|ref|ZP_06096089.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306839623|ref|ZP_07472427.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. NF 2653]
 gi|264661946|gb|EEZ32207.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306405321|gb|EFM61596.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. NF 2653]
          Length = 404

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+ YR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRSYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQCVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|307943383|ref|ZP_07658727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseibium sp. TrichSKD4]
 gi|307773013|gb|EFO32230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseibium sp. TrichSKD4]
          Length = 388

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 203/387 (52%), Positives = 270/387 (69%), Gaps = 1/387 (0%)

Query: 10  NMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N  G   +   G+Y+HWPFC  KCPYCDFNSHVR   V Q+ F  +F  E+     LT  
Sbjct: 2   NTKGTAPDGGFGIYIHWPFCAAKCPYCDFNSHVRHQAVDQDRFAAAFERELTHFADLTKG 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +++ SIFFGGGTPSL++PQ +  IL  ++  W++   VEI++EANPSSVE   F+GYR A
Sbjct: 62  KTVQSIFFGGGTPSLMKPQTVERILSKVSGLWSIDDEVEISLEANPSSVESERFRGYRAA 121

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GVNR+SLGVQSL ++ L+ LGR H+   A+ AI  AR+ FPR+SFDLIYA P Q++  W 
Sbjct: 122 GVNRVSLGVQSLHDRDLKLLGRLHDVKTALKAIETARSTFPRLSFDLIYARPDQSLEDWR 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ELQ+AL  A DHLSLYQLTIE GT FY ++  G LV+P  +V  + Y LTQ IT+AHGL
Sbjct: 182 AELQQALDLAADHLSLYQLTIEPGTPFYTLYHAGKLVVPEPDVGAEFYALTQDITTAHGL 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            AYE+SNH+  GAE  HN  YWRYGDY+G+GPGAH R+ VG+ ++A +IE+HPE+WL+ V
Sbjct: 242 PAYEVSNHARPGAECRHNQVYWRYGDYVGVGPGAHGRITVGASKLATAIERHPETWLENV 301

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
             +GH  VE + LS E+Q DEFL+MGLRL EGI ++ +E +A R +D      L   G +
Sbjct: 302 ETHGHGKVEDQGLSEEEQGDEFLLMGLRLTEGIDLQRYEKIACRAIDPRRLSALIEHGMV 361

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E++  +R+R T+ G  +LD+V+A+LA 
Sbjct: 362 EKIDETRVRATRDGFMVLDAVVADLAA 388


>gi|254713257|ref|ZP_05175068.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|254716390|ref|ZP_05178201.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
          Length = 397

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TG R+
Sbjct: 13  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGLRT 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 73  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 133 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 193 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 253 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 313 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 373 MGGSLIRATPDGALVLDALVADLAA 397


>gi|261218176|ref|ZP_05932457.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
 gi|261320976|ref|ZP_05960173.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|260923265|gb|EEX89833.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
 gi|261293666|gb|EEX97162.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
          Length = 404

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TG R+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGLRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|306842540|ref|ZP_07475191.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO2]
 gi|306287396|gb|EFM58876.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO2]
          Length = 385

 Score =  445 bits (1145), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TG R+
Sbjct: 1   MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGLRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 121 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 181 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 241 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 301 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 361 MGGSLIRATPDGALVLDALVADLAA 385


>gi|240849728|ref|YP_002971116.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
 gi|240266851|gb|ACS50439.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
          Length = 399

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/397 (53%), Positives = 269/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+ +F  E++      GPR I+SIF
Sbjct: 2   NEPFGIYIHWPFCAAKCPYCDFNSHVRIHGVDQPRFVTAFKREIETQYHKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EPQ +  +L  +AK W V+ NVEIT+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMEPQTVDALLQALAKKWVVNDNVEITLEANPSSVEAERFRGYRAAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +++LR LGR HN  +A+ AI LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GIQALNDKALRKLGRLHNVEQALCAIDLARQIFPRLSFDLIYARPEQTLEQWKSELVQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F ++H  G L+LP   +A DLYNLTQ IT+ HGL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTAFKRLHDAGRLILPPSELAADLYNLTQEITALHGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-------------KVGSH-----RVAISI 297
           H+  GAES HNL YWRY  Y G GPGAH R               + SH     R     
Sbjct: 242 HAIPGAESAHNLLYWRYHQYAGFGPGAHGRFIEHAPNHSSACSKTLSSHLENRERYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE WL +V K GH  +E E L++EQQA+E L+MGLRL EG+ +  +E L+ + + +E
Sbjct: 302 EKHPEQWLNLVEKTGHGCIETEHLTTEQQANEMLLMGLRLSEGLELIRYETLSPKRIPME 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ Q  IE V   RL+ T +G  +LD +I+ LA
Sbjct: 362 KLIDLQHQELIEMVDNQRLKATTKGRIVLDHIISQLA 398


>gi|328541649|ref|YP_004301758.1| Coproporphyrinogen III oxidase, anaerobic [polymorphum gilvum
           SL003B-26A1]
 gi|326411401|gb|ADZ68464.1| Coproporphyrinogen III oxidase, anaerobic [Polymorphum gilvum
           SL003B-26A1]
          Length = 385

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 199/385 (51%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT        +YVHWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+    + T  R 
Sbjct: 1   MTLSTDAGFAIYVHWPFCTAKCPYCDFNSHVRHAGVDQARFVAAFERELAHFAEWTRGRR 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + SIFFGGGTPSL+ P  +  IL+ IA +W + ++VEI++EANPSSVE   F+GYR AGV
Sbjct: 61  VQSIFFGGGTPSLMAPCTVERILEAIAGHWALDADVEISLEANPSSVEAERFRGYRTAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L +  L+ LGR H+   A+AAI  AR  FPR+SFDLIYA P QT+  W+ E
Sbjct: 121 NRVSLGVQALNDPDLKMLGRLHDVQTALAAIDTARATFPRLSFDLIYARPGQTVAGWQAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+RA+  A DHLSLYQLTIE+GT F+ + + G L +P  ++  + Y LTQ++T AHGL A
Sbjct: 181 LERAIGLAADHLSLYQLTIEEGTPFFALRQAGKLTVPDPDLGAEFYELTQAVTEAHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAE  HNL YWRYGDY+G+GPGAH R+ +G+ + A +IE+HPE+WL  V  
Sbjct: 241 YEVSNHARPGAECRHNLVYWRYGDYVGVGPGAHGRLSLGASKRATAIERHPETWLANVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH +VE   L+ E+Q DE+L+MGLRL EG+ +  +E LAGR +D      L + G +E+
Sbjct: 301 HGHGMVENLPLTEEEQGDEYLLMGLRLVEGVDLSRYEALAGRQIDPRRLDALLQHGMVEK 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +   +LR T+ G  +LD+V+A+LA 
Sbjct: 361 IGNHKLRATRDGFFVLDAVVADLAA 385


>gi|319407922|emb|CBI81576.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           schoenbuchensis R1]
          Length = 399

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/397 (52%), Positives = 269/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFCV KCPYCDFNSHVR+  V Q+ F+ +F  EM    +  GPR I+SIF
Sbjct: 2   AEPFGIYIHWPFCVAKCPYCDFNSHVRKNGVDQQRFVAAFKREMTTQYRTIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AKNWT+    EIT+EANPSSVE   F+GYR AG+NR+SL
Sbjct: 62  IGGGTPSLMTPQTVDALLQTVAKNWTIDDKTEITLEANPSSVEAERFRGYRAAGINRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++LR LGR H+  +A+ AI LAR IF R+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GVQALNDKALRQLGRLHDVKQALHAITLAREIFTRLSFDLIYARPEQTLKQWKYELSQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT+F K++  G L+LP   +A DLYNLTQ IT+ HGL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTVFKKLYAAGKLILPVSQLAADLYNLTQEITTMHGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAH--------------SRVKVGS----HRVAISI 297
           H+  GAES HNL YWRY +Y G GPGAH              S++ +       R     
Sbjct: 242 HAMPGAESRHNLLYWRYNEYAGFGPGAHGRFIQRPMKNFSTFSKIPLSKTEKLERYVTMN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE WL++V   GH  +E E L+ +QQA+E L+MGLRL EG+ +  +E L+ ++L   
Sbjct: 302 EKHPERWLELVETTGHGCIETEQLTRKQQANEMLLMGLRLSEGLDLTRYETLSLKSLSPV 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              NLQ+QG IE V   RL+ T +G  +LD +I  LA
Sbjct: 362 KLANLQQQGLIEMVDNQRLKATTKGFIVLDYIINQLA 398


>gi|118593719|ref|ZP_01551094.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
 gi|118433729|gb|EAV40391.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
          Length = 384

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/383 (52%), Positives = 261/383 (68%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G      G+Y+HWPFC  KCPYCDFNSHVR   V Q  F  +F  E+     LT  + + 
Sbjct: 2   GAAEGGFGIYIHWPFCAAKCPYCDFNSHVRHQPVDQARFAAAFERELSHFADLTKNKKVQ 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL+EP  +  IL  ++  W++  NVEI++EANPSSVE   F+GYR AGVNR
Sbjct: 62  SVFLGGGTPSLMEPATVDRILKAVSDRWSMDENVEISLEANPSSVEAERFRGYRSAGVNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLGVQSL +  LR LGR H+A  A  AI  AR  FPR+SFDLIYA P QT+  WE EL 
Sbjct: 122 VSLGVQSLIDTDLRLLGRLHDARTARTAIETARATFPRLSFDLIYARPGQTLAGWEQELN 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++ A DHLSLYQLTIE+GT F+ +   G L +P  ++  + Y LTQ++T+A GL AYE
Sbjct: 182 EAIALAADHLSLYQLTIEEGTPFHTLFHAGKLKVPDPDLGAEFYELTQNVTAAAGLPAYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SNH+  GAE  HNL YWRYGDY+G+GPGAH R+ VG+ R+A S E+HPE+WL+ V  +G
Sbjct: 242 VSNHARPGAECRHNLVYWRYGDYVGVGPGAHGRITVGASRLATSTERHPETWLENVESHG 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
            A+VE   LS E+Q DEFL+MGLRL EGI +K +E  A R++D      L   G +E + 
Sbjct: 302 QALVENAGLSEEEQGDEFLLMGLRLTEGIDLKRYERYASRSVDPARLAALIEHGMVEEIG 361

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +R+R T+ G  +LD+V+A+LA 
Sbjct: 362 ENRIRATREGFFVLDAVVADLAA 384


>gi|254472504|ref|ZP_05085904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudovibrio sp. JE062]
 gi|211958787|gb|EEA93987.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudovibrio sp. JE062]
          Length = 387

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 196/385 (50%), Positives = 270/385 (70%), Gaps = 1/385 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT   +   G+YVHWPFC+ KCPYCDFNSHVR   V QE++ ++  TE+    Q+   R+
Sbjct: 1   MTVSPAGGFGIYVHWPFCLAKCPYCDFNSHVRHQPVSQEHYAKALATELARYAQMVPGRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + SIFFGGGTPSL+EP+ +  IL+ IA+ W +  + EI++EANP+SVE   F GYR AGV
Sbjct: 61  VDSIFFGGGTPSLMEPKTVETILNEIARLWHLPDSAEISMEANPTSVEATRFAGYRSAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+Q+L+++ L+ LGR H+ SEAI A+ +AR  FPR+SFDLIYA P QT+  WE E
Sbjct: 121 NRLSVGIQALDDKELKILGRQHSVSEAIQAVEIARKTFPRISFDLIYARPNQTLKAWEQE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+  A DHLS+YQLTIE GT+F +++  G L +   ++A D+++LTQ +T+A G  A
Sbjct: 181 LNRAIDLAADHLSMYQLTIESGTMFQRLYAAGKLEMLDPDLAADMFDLTQEVTAARGFPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIEKHPESWLKMVR 309
           YE+SNH+   A+ LHNL YWRYGDY+G+GPGAH R+ +    ++A S EKHPE+WL +V 
Sbjct: 241 YEVSNHAAPDAQCLHNLIYWRYGDYVGVGPGAHGRLTLEDGAKLATSTEKHPETWLGLVE 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
             GH  + ++ L  ++Q DE L+MG+RL EGI V  +E L+GR    +   NLQ  G +E
Sbjct: 301 TKGHGAISEDRLVRDEQGDELLLMGMRLHEGIDVPRYEQLSGRQFSPQRLLNLQENGMVE 360

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            V  +RLR TQ G  +L++VIA LA
Sbjct: 361 WVSNTRLRATQTGFPLLNAVIAELA 385


>gi|75674390|ref|YP_316811.1| coproporphyrinogen III oxidase [Nitrobacter winogradskyi Nb-255]
 gi|74419260|gb|ABA03459.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrobacter winogradskyi Nb-255]
          Length = 386

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/380 (53%), Positives = 268/380 (70%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + + GVY+HWPFC+ KCPYCDFNSHVR   + +E F ++F  E++     +  R++SSIF
Sbjct: 7   AAAFGVYIHWPFCLSKCPYCDFNSHVRHAPIDEERFTRAFAREIETTAARSRGRTVSSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  ILD I K+W+V+ +VE+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 67  LGGGTPSLMRPQTVGAILDAIGKHWSVADDVEVTLEANPTSVEATRFRGYRAAGVNRVSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++ SL+ LGR H A EA  A+ +AR++F R SFDLIYA P QT   W  ELQRA+
Sbjct: 127 GVQALDDSSLKALGRLHTAREAQDAVAIARSVFDRYSFDLIYARPDQTPAMWAGELQRAI 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A +HLSLYQLTIE GT F+ +H  G L  P E +A DLY++TQ + + HGL AYEISN
Sbjct: 187 SEAAEHLSLYQLTIEAGTPFFDLHAAGKLKTPDEAMARDLYDVTQDVCARHGLPAYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V  NG+ +
Sbjct: 247 HARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGVRHAIATEKRPEAWLMRVEANGNGI 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           V  + L+SE++ADEFL+MGLRLREGI  + +  L+GR+LD      L+ +G I      R
Sbjct: 307 VADDPLNSEERADEFLLMGLRLREGIDPRRYAALSGRSLDPRRIAILRDEGAIMISTDGR 366

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR TQ G  +LD+V+A+LA 
Sbjct: 367 LRVTQDGFPVLDAVVADLAA 386


>gi|86747549|ref|YP_484045.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris HaA2]
 gi|86570577|gb|ABD05134.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris HaA2]
          Length = 390

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/381 (53%), Positives = 266/381 (69%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G  + GVYVHWPFC+ KCPYCDFNSHVR   + ++ F ++F  E++   Q  GPR ++SI
Sbjct: 10  GVQAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEDRFARAFAREIEATAQRIGPRDVTSI 69

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL++PQ +  ILD I K W V+ +VE+++EANP+SVE   F+GYR AGVNR+S
Sbjct: 70  FLGGGTPSLMQPQTVGAILDAIGKYWRVAPDVEVSLEANPTSVEATRFRGYRAAGVNRVS 129

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+L++ SL+ LGR H A EA+ A+ +AR  F R SFDLIYA P QT   WE EL+RA
Sbjct: 130 LGVQALDDASLKTLGRLHTAQEAMEAVAIARAAFDRYSFDLIYARPGQTPAMWEAELRRA 189

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A +HLSLYQLTIE  T F+ +H+ G L  P E+ +  LY++TQS+ +  GL AYEIS
Sbjct: 190 IGEAAEHLSLYQLTIEAETPFFALHRAGKLQTPDESASRALYDVTQSVCAELGLPAYEIS 249

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R AI+ EK PESWL  V  +G  
Sbjct: 250 NHARPGAECKHNLVYWRGQEYAGIGPGAHGRLDIGGTRYAIATEKRPESWLMRVEASGTG 309

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           VV  + L+SE++ADEFL+MGLRL EGI  + ++ LAGR+LD      L+ +G I      
Sbjct: 310 VVTDDRLNSEERADEFLLMGLRLAEGIDPRRYQALAGRSLDPSRIAILREEGAIAVDADG 369

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           RLR TQ G  +LD+V+A+LA 
Sbjct: 370 RLRVTQAGFPVLDAVVADLAA 390


>gi|299133259|ref|ZP_07026454.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
 gi|298593396|gb|EFI53596.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
          Length = 385

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 201/385 (52%), Positives = 265/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M     N+ GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E+      T  R+
Sbjct: 1   MPADAQNAFGVYVHWPFCLSKCPYCDFNSHVRHTAIDEERFARAFAREIATTAARTPGRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++PQ +  +LD I ++W V   VE+T+EANP+SVE   F GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMKPQTVGAVLDAIGQHWNVDKGVEVTLEANPTSVEATRFAGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EA+ A+ +AR  F R SFDLIYA P Q+   W  E
Sbjct: 121 NRVSLGVQALDDASLKALGRMHSAREALDAVAIARRSFDRYSFDLIYARPDQSADAWTRE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+S A +HLSLYQLTIE+GT F+ +H+ G L  P E++A  LY++TQ + +AHGL +
Sbjct: 181 LKVAISEAAEHLSLYQLTIEEGTPFFGLHRAGKLKTPDEDLARQLYDVTQEVCAAHGLPS 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R A + +K PE+WL  V +
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIGGIRHATATDKRPEAWLTRVEE 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH +  ++ L SEQ+ADEFL+MGLRL EGI  K +  LAGR LD      L+  G I  
Sbjct: 301 DGHGIATEDLLDSEQRADEFLLMGLRLAEGIDPKRYAALAGRPLDPHRIAALKEDGAIVM 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +  RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DESGRLRVTQDGFPLLDAVVADLAA 385


>gi|85714063|ref|ZP_01045052.1| coproporphyrinogen III oxidase [Nitrobacter sp. Nb-311A]
 gi|85699189|gb|EAQ37057.1| coproporphyrinogen III oxidase [Nitrobacter sp. Nb-311A]
          Length = 386

 Score =  435 bits (1118), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/380 (53%), Positives = 268/380 (70%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + + GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E++     +  R++SSIF
Sbjct: 7   ATAFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEERFARAFAREIETTAARSRGRTVSSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL++PQ +  ILD I K+W V  +VE+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 67  LGGGTPSLMQPQTVGAILDAIGKHWGVGGDVEVTLEANPTSVEATRFRGYRAAGVNRVSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++ SL+ LGR H A EA+ A+ +AR++F R SFDLIYA P QT   W  ELQRA+
Sbjct: 127 GVQALDDPSLKALGRLHTAREALDAVAIARSVFGRYSFDLIYARPDQTPVMWAEELQRAI 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S AV+HLSLYQLTIE+GT F+ +H  G L  P+E +A  LY++TQ I + HGL AYE+SN
Sbjct: 187 SEAVEHLSLYQLTIEEGTPFFGLHTAGKLKTPNEAIARALYDVTQEICTRHGLPAYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V   G  V
Sbjct: 247 HARPGAECRHNLVYWRGEEYAGIGPGAHGRLDIDGIRHAIATEKRPEAWLMRVEATGDGV 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           V  + L+SE++ADEFL+MGLRLREGI  + +  L+GR+LD      L+ +G I      R
Sbjct: 307 VADDLLNSEERADEFLLMGLRLREGIDPQRYAALSGRSLDPRRIAILRDEGAITISTDGR 366

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR TQ G  +LD+V+A+LA 
Sbjct: 367 LRVTQDGFPVLDAVVADLAA 386


>gi|92115781|ref|YP_575510.1| coproporphyrinogen III oxidase [Nitrobacter hamburgensis X14]
 gi|91798675|gb|ABE61050.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrobacter hamburgensis X14]
          Length = 386

 Score =  434 bits (1117), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 204/380 (53%), Positives = 266/380 (70%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + + GVYVHWPFC+ KCPYCDFNSHVR   + +E F+++F  E++     +  R +SSIF
Sbjct: 7   TTAFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEERFVRAFTREIETTAARSPGREVSSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL++PQ +  IL+ I KNW V+ N EIT+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 67  LGGGTPSLMQPQTVGAILEAIGKNWRVADNAEITLEANPTSVEATRFRGYRAAGVNRVSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++ SL+ LGR H A EA+ A+ +AR++F R SFDLIYA P QT   W  ELQRA+
Sbjct: 127 GVQALDDASLKALGRLHTAREALDAVAIARSVFDRYSFDLIYARPDQTPAMWSEELQRAI 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A +HLSLYQLTIE+GT F+ +H  G L  P E ++  LY++TQ I + HGL AYEISN
Sbjct: 187 SEAAEHLSLYQLTIEQGTPFFGLHAAGKLKTPDEAISRALYDVTQEICARHGLPAYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V   G+ +
Sbjct: 247 HARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGDRHAIATEKRPEAWLMRVEAIGNGI 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           V  + L+SE++ADEFL+MGLRLREGI  + +  L+GR LD      L+ +G I      R
Sbjct: 307 VADDLLNSEERADEFLLMGLRLREGIDPQRYAALSGRLLDPRRIAILREEGAIAISPDGR 366

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR TQ G  +LD+V+A+LA 
Sbjct: 367 LRVTQDGFPVLDAVVADLAA 386


>gi|192288761|ref|YP_001989366.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris TIE-1]
 gi|192282510|gb|ACE98890.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 385

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/385 (52%), Positives = 264/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E+    +  GPR 
Sbjct: 1   MQASSDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAFAREIATTAERIGPRQ 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +A ILD IA++W V    E+T+EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVAAILDAIARHWHVEPGAEVTLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EA+ A+ +A++ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKALGRMHSAEEALNAVAIAKSAFDRYSFDLIYARPGQTAAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A +HLSLYQLTIE  T FY +HK G L  P E  A  LY++TQS+ +  GL A
Sbjct: 181 LRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEARALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G+ R A + EK PESWL  V  
Sbjct: 241 YEISNHARPGAECRHNLIYWRGHEYAGIGPGAHGRLDIGNARYATATEKRPESWLMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  E L+SE++ADEFL+MGLRL EGI  + +++L+GR LD      L+ +G I  
Sbjct: 301 TGHGLIADEHLTSEERADEFLLMGLRLAEGIDPQRYQLLSGRPLDPSRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQEGFPVLDAVVADLAA 385


>gi|39933404|ref|NP_945680.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris CGA009]
 gi|39647250|emb|CAE25771.1| possible oxygen-independent coproporphyrinogen III oxidase (hemN)
           [Rhodopseudomonas palustris CGA009]
          Length = 385

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/385 (52%), Positives = 264/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E+    +  GPR 
Sbjct: 1   MQASSDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAFAREIATTAERIGPRQ 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +A ILD IA++W V    E+T+EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVAAILDAIARHWQVEPGAEVTLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EA+ A+ +A++ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKALGRLHSAEEALNAVAIAKSAFDRYSFDLIYARPGQTAAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A +HLSLYQLTIE  T FY +HK G L  P E  A  LY++TQS+ +  GL A
Sbjct: 181 LRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEARALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G+ R A + EK PESWL  V  
Sbjct: 241 YEISNHARPGAECRHNLIYWRGHEYAGIGPGAHGRLDIGNARYATATEKRPESWLMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  E L+SE++ADEFL+MGLRL EGI  + +++L+GR LD      L+ +G I  
Sbjct: 301 TGHGLIADEHLTSEERADEFLLMGLRLAEGIDPQRYQLLSGRPLDPSRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQEGFPVLDAVVADLAA 385


>gi|209883565|ref|YP_002287422.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oligotropha carboxidovorans OM5]
 gi|209871761|gb|ACI91557.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oligotropha carboxidovorans OM5]
          Length = 385

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M     N+ GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F+ E+         R+
Sbjct: 1   MRADAHNAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAFVREIATTAARAPDRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++PQ +A ILD IA++W+V  +VE+T+EANP+SVE   F GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMKPQTVATILDAIAQHWSVDKSVEVTLEANPTSVEATRFAGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++QSL+ LGR H A EA+ A+ +AR  F R SFDLIYA P Q +  W  E
Sbjct: 121 NRVSLGVQALDDQSLKALGRLHTAREALDAVAIARRAFKRYSFDLIYARPDQGVQAWAGE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA++ A +HLSLYQLTIE+GT F+ +H+ G L  P+E++A  LY++TQ I +A+ L A
Sbjct: 181 LHRAIAEAAEHLSLYQLTIEEGTPFFGLHRAGKLKTPNEDLARALYDVTQEICAANNLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE WL  V +
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGIRHAIATEKRPEVWLSRVEE 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  + L SEQ+ADEFL+MGLRL EGI  + +E LAGR LD      L+  G I  
Sbjct: 301 EGHGLITDDLLDSEQRADEFLLMGLRLAEGIDPQRYETLAGRPLDPHRIAALKNDGAIVM 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DINGRLRVTQAGFPLLDAVVADLAA 385


>gi|49473731|ref|YP_031773.1| coproporphyrinogen III oxidase [Bartonella quintana str. Toulouse]
 gi|49239234|emb|CAF25554.1| Oxygen-independent coproporphyrinogen III oxidase [Bartonella
           quintana str. Toulouse]
          Length = 399

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/394 (52%), Positives = 271/394 (68%), Gaps = 18/394 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+++F  E++      GPR I+SIF GG
Sbjct: 5   FGIYIHWPFCAAKCPYCDFNSHVRVHGVDQPRFVKAFKREIETQYHKIGPRHITSIFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ PQ +  +L  +AK WTV    EIT+EANPSSVE N F GYR AGVNR+SLGVQ
Sbjct: 65  GTPSLMTPQTVDALLQALAKTWTVDDKAEITLEANPSSVEANRFYGYRAAGVNRLSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +++LR LGR H+  +A+ AI LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+  A
Sbjct: 125 ALNDKALRQLGRLHDVKQALHAIVLAREIFPRLSFDLIYARPEQTLEQWKCELFQAIDLA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT F ++H  G L+LP   +A +LY+LTQ +T+ HGL AYEISNH+ 
Sbjct: 185 ADHLSLYQLTIEEGTAFKRLHAAGRLILPESELAANLYHLTQEMTALHGLPAYEISNHAI 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSR------------VKVGSHRV-----AISI-EKH 300
            GAES HNL YWRY +Y G GPGAH R            +K  S ++     +++I EKH
Sbjct: 245 PGAESAHNLLYWRYHEYAGFGPGAHGRFIERSTNHFSPFLKSSSSQIKNRERSVTINEKH 304

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PE WL++V   GH  VE E L+  QQA+E L+MGLRL EG+ +  +E L  ++L IE   
Sbjct: 305 PEYWLELVETKGHGCVETEQLTPLQQANEMLLMGLRLCEGLDLTRYETLTSKSLPIEKLI 364

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           NL+ QG +E +   RL+ T +G  +LD +I+ LA
Sbjct: 365 NLKHQGLVETIGHQRLKATAKGRILLDHIISQLA 398


>gi|304392748|ref|ZP_07374688.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ahrensia sp. R2A130]
 gi|303295378|gb|EFL89738.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ahrensia sp. R2A130]
          Length = 394

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 205/386 (53%), Positives = 260/386 (67%), Gaps = 4/386 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            G+   G+YVHWPFC  KCPYCDFNSHVR   V QE F   F  E+  M  L   R ++S
Sbjct: 9   DGTPGFGIYVHWPFCAAKCPYCDFNSHVRHRTVDQEAFAAGFEREIAHMAALQPNRPVTS 68

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+EP  +  IL+ I  +W V   +EIT+EANP+SVE + F GYR AGVNR+
Sbjct: 69  VFFGGGTPSLMEPATVGTILEAIHSHWRVEDGIEITLEANPTSVEADRFSGYRAAGVNRV 128

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQSL ++ L+FLGR H+A EAIAAI +AR++FPR+SFD+IYA P Q +  W++EL++
Sbjct: 129 SLGVQSLRDEQLKFLGRMHSADEAIAAIGIARDLFPRLSFDMIYARPDQKLDDWKVELEQ 188

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+S A DHLSLYQLTIE  T FY +HK G   +P    A  LY LTQ IT A GL AYEI
Sbjct: 189 AISLAADHLSLYQLTIEPDTPFYDLHKKGRFAIPDHEQAAQLYELTQDITEAAGLPAYEI 248

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+  G ES HNL YWR G + GIGPGAH R+ +   R A++ ++HPESWL  V+ NGH
Sbjct: 249 SNHAIPGHESRHNLTYWRSGTWAGIGPGAHGRLDMNDGRHALATKRHPESWLDDVQDNGH 308

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE---- 369
           A+VE E LS    ADE L+MG+RLREG+ +  +    G  +D    ++L+  G +E    
Sbjct: 309 ALVEDETLSDADLADEMLLMGMRLREGVDLNRYTQTTGIAIDPIRLQDLKGHGMVESWTD 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                RLR T  G  +LD+VIA+LA 
Sbjct: 369 EQGRPRLRATPAGWLVLDAVIADLAA 394


>gi|146337343|ref|YP_001202391.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. ORS278]
 gi|146190149|emb|CAL74141.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW)
           [Bradyrhizobium sp. ORS278]
          Length = 385

 Score =  431 bits (1108), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 203/385 (52%), Positives = 263/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M+   S + GVYVHWPFC+ KCPYCDFNSHVR   + Q+ F ++F  E+      TGPR+
Sbjct: 1   MSSAESEAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDQDRFARAFAQEIANTAARTGPRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++PQ +  ILD I K+W V+ +VE+++EANP+SVE   F GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPQTVGAILDAIGKHWHVAPDVEVSLEANPTSVEATRFAGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ++++ SL+ LGR H A EA+ A+ +AR  F R SFDLIYA P QT   W  E
Sbjct: 121 NRVSLGVQAMDDASLKMLGRLHTAEEAMKAVAIARGAFERYSFDLIYARPDQTAAMWTEE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+  A +HLSLYQLTIE+GT F+ +H  G L    E +A  LY++TQ I + HGL A
Sbjct: 181 LTRAIGEAAEHLSLYQLTIEEGTPFFGLHAAGKLKTLDEGLARTLYDVTQEICARHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R A + +K PE+WL  V  
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIEGIRHATATDKRPEAWLMRVET 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           NGH V+  + L+SE++ADEFL+MGLRL EGI  + +  +AGR LD      L+ +G I  
Sbjct: 301 NGHGVMTDDLLNSEERADEFLLMGLRLSEGIDPRRYAAIAGRTLDPRRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 EPDGRLRVTQDGFPVLDAVVADLAA 385


>gi|316931693|ref|YP_004106675.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
 gi|315599407|gb|ADU41942.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
          Length = 385

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/385 (52%), Positives = 262/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +E F + F  E+    +  GPR 
Sbjct: 1   MRASPDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARGFAREIATTAERIGPRQ 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +A ILD IA++W V    E+++EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVAAILDAIARHWHVEPGAEVSLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EAI A+ +A++ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKALGRLHSAEEAINAVAIAKSAFDRYSFDLIYARPGQTAAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A +HLSLYQLTIE  T FY +HK G L  P E  A  LY++TQS+ +  GL A
Sbjct: 181 LRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEARALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G+ R A + EK PESWL  V  
Sbjct: 241 YEISNHARPGAECRHNLIYWRGQEYAGIGPGAHGRLDIGAVRYATATEKRPESWLMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  E L+SE++ADEFL+MGLRL EGI  + ++ L+GR LD      L+ +G I  
Sbjct: 301 TGHGLIADERLTSEERADEFLLMGLRLAEGIDPQRYQALSGRPLDPSRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQEGFPVLDAVVADLAA 385


>gi|319898242|ref|YP_004158335.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           clarridgeiae 73]
 gi|319402206|emb|CBI75737.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           clarridgeiae 73]
          Length = 399

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/397 (52%), Positives = 270/397 (68%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFCV KCPYCDFNS+VR   V Q  F  +F  EM       GPR I+SIF
Sbjct: 2   TKPFGIYIHWPFCVSKCPYCDFNSYVRINGVDQPRFAAAFEREMTTQAHEIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  IAKNWT+    EIT+EANPSSVE + F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMTPQTVDRLLQAIAKNWTIDDKTEITLEANPSSVEADRFRGYRLAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++L+ LGR HN  +A+ AI+LAR IFPR+SFDLIYA PKQT+ QWE EL +A+
Sbjct: 122 GVQALNDKALQQLGRLHNVKQALYAINLAREIFPRLSFDLIYARPKQTLKQWESELLQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A DHLSLYQLTIE GT F K+H  G L+LP+   A +LY LTQ IT+ +GL AYEISN
Sbjct: 182 NLAADHLSLYQLTIEDGTNFKKLHAAGKLILPTSERAANLYTLTQEITTMYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-----------------KVGSHRVAISI- 297
           H+  GAES HNL YWRY +Y G GPGAH R                  K  +H   ++I 
Sbjct: 242 HAIPGAESCHNLLYWRYHEYAGFGPGAHGRFIKQQLKNSSFLSETLLSKTENHNRYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EK+PE+WLK+V   GH  ++ E L+ EQQA+E L+MGLRL EG+++K +E L+G++L  +
Sbjct: 302 EKYPENWLKLVETIGHGCIDTEQLTQEQQANEMLLMGLRLSEGLNLKRYETLSGQSLSPK 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ++G IE      L+ T  G  +LD +I  LA
Sbjct: 362 KLISLQQKGLIEMTSNQHLKATATGRILLDHIICQLA 398


>gi|148251802|ref|YP_001236387.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. BTAi1]
 gi|146403975|gb|ABQ32481.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW)
           [Bradyrhizobium sp. BTAi1]
          Length = 385

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/385 (52%), Positives = 264/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT   + + GVYVHWPFC+ KCPYCDFNSHVR   + Q+ F ++F  E++      G R+
Sbjct: 1   MTSAENEAFGVYVHWPFCLSKCPYCDFNSHVRHTAIDQDRFARAFAREIETTAARIGART 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++PQ +  ILD I K+W V+S+VE+++EANP+SVE   F GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPQTVGAILDAIGKHWHVASDVEVSLEANPTSVEATRFAGYRTAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ++++ SL+ LGR H A EA+ A+ +AR  F R SFDLIYA P QT   W  E
Sbjct: 121 NRVSLGVQAMDDASLKMLGRLHTAEEAMKAVAIARQAFTRYSFDLIYARPDQTPAMWTEE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+  A +HLSLYQLTIE+GT F+ +H  G L  P E +A  LY++TQ + + HGL A
Sbjct: 181 LTRAIGEAAEHLSLYQLTIEEGTPFFGLHAAGKLKTPDEGLARTLYDVTQEVCARHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ +K PE+WL  V  
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGIRHAIATDKRPEAWLMRVES 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           NGH V+  + L+ E++ADEFL+MGLRL EGI  K +  ++GR LD      L+ +G I  
Sbjct: 301 NGHGVMTDDELNREERADEFLLMGLRLAEGIDPKRYAAISGRPLDPRRIALLREEGAIIV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DGDGRLRVTQDGFPVLDAVVADLAA 385


>gi|163867355|ref|YP_001608549.1| coproporphyrinogen III oxidase [Bartonella tribocorum CIP 105476]
 gi|161016996|emb|CAK00554.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           tribocorum CIP 105476]
          Length = 399

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/397 (51%), Positives = 268/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+ +F  E++      GPR I+SIF
Sbjct: 2   NEPFGIYIHWPFCTAKCPYCDFNSHVRIHGVDQPRFVSAFEREIETQYHKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EPQ +  +L  +A+ W +   VEIT+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMEPQTVDALLQALARKWILDDKVEITLEANPSSVEAERFRGYRAAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +++LR LGR HN  +A+ AI LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GIQALNDKALRKLGRLHNVEQALYAIDLARQIFPRLSFDLIYARPEQTLEQWKSELIQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F ++H  G L+LP      DLY+LTQ IT+ +GL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTAFKRLHDAGRLILPPSEQTADLYHLTQEITALYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-----------------KVGSHRVAISI- 297
           H+  GAES HNL YWRY  Y G GPGAH R                     +H   ++I 
Sbjct: 242 HAMPGAESAHNLLYWRYHQYAGFGPGAHGRFIENIPNYSSAFSKTSLSHFENHERYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           E+HPE WL++V K GH  +E E L++EQQA+E L+MGLRL EG+ +  +E L+ + + +E
Sbjct: 302 ERHPEQWLELVEKTGHGCIETERLTTEQQANEMLLMGLRLCEGLELTRYETLSSKRIPME 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ+Q  +E V   RL+ T +G  +LD +I+ LA
Sbjct: 362 KLIDLQQQELVEMVNNQRLKATTKGRIVLDHIISQLA 398


>gi|319403535|emb|CBI77116.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           rochalimae ATCC BAA-1498]
          Length = 399

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/397 (51%), Positives = 267/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNS+VR   V Q  F  +F  E+    +  GPR I+SIF
Sbjct: 2   TKPFGIYIHWPFCTSKCPYCDFNSYVRINGVDQPRFANAFEREITTQAKEIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AKNWT+    EIT+EANPSSVE N F+GY+ AGVNR+SL
Sbjct: 62  IGGGTPSLMAPQTVDRLLQAVAKNWTIDDKAEITLEANPSSVEANRFRGYQLAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++L+ LGR HN  +A+ AI+LAR IFPR+SFDLIYA PKQT+ QWE EL +A+
Sbjct: 122 GVQALNDKALQQLGRLHNVKQALHAINLAREIFPRLSFDLIYARPKQTLKQWETELLQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A DHLSLYQLTIE GT F K+H  G L+LP+   A +LY LTQ IT+ +GL AYEISN
Sbjct: 182 NLAADHLSLYQLTIEDGTTFKKLHAAGKLILPASEQAANLYTLTQEITTMYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-----------------KVGSHRVAISI- 297
           H+  GAES HNL YWRY +Y G GPGAH R                  K+ +H   ++I 
Sbjct: 242 HAIPGAESCHNLLYWRYHEYAGFGPGAHGRFIKQSLKNSSFFSETFPSKIENHSRYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE+WL++V   GH  ++ E LS EQQA+E L+MG+RL EG+ +  +E L+ ++L  +
Sbjct: 302 EKHPENWLELVETKGHGCIDTEHLSQEQQANEMLLMGMRLSEGLDLARYETLSCQSLSRK 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               LQ+QG IE      L+ T  G  +LD +I  LA
Sbjct: 362 KLIRLQQQGLIEITDKQHLKATTTGRILLDHIIGQLA 398


>gi|49474877|ref|YP_032918.1| coproporphyrinogen III oxidase [Bartonella henselae str. Houston-1]
 gi|49237682|emb|CAF26869.1| Oxygen-independent coproporphyrinogen III oxidase [Bartonella
           henselae str. Houston-1]
          Length = 399

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/394 (51%), Positives = 269/394 (68%), Gaps = 18/394 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+ +F  E++      GPR I SIF GG
Sbjct: 5   FGIYIHWPFCAAKCPYCDFNSHVRLHGVDQPRFVTAFEREIETQYHKIGPRCIKSIFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ PQ +  +L  +A+ W +    EIT+EANPSSVE   F+GYR AGVNR+SLGVQ
Sbjct: 65  GTPSLMTPQTVDALLQILARTWNIDDKAEITMEANPSSVEAERFRGYRVAGVNRLSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +++LR LGR H+  +A+ AI LAR IFPR+SFDLIYA P QT+ QW+ EL +A+  A
Sbjct: 125 ALNDKALRQLGRLHDVKQALHAIALARKIFPRLSFDLIYARPGQTLEQWKCELFQAIDLA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT F ++H  G L LP   +A DLY LTQ IT+ HGL AYEISNH+ 
Sbjct: 185 ADHLSLYQLTIEEGTAFKRLHAAGRLFLPESELAADLYQLTQEITALHGLPAYEISNHAI 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV-----------------KVGSHRVAISI-EKH 300
            GAES+HNL YWRY +Y G GPGAH R                  ++ +   +++I EK+
Sbjct: 245 SGAESVHNLLYWRYHEYAGFGPGAHGRFIEHSQNHSSASSKADPSQIENRERSVTINEKY 304

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PE WL++V K GH  +E E L++EQQA+E L+MGLRL EG+ +  ++ L+ +NL +E   
Sbjct: 305 PEHWLELVEKTGHGCIETEQLTTEQQANEMLLMGLRLCEGLDLIRYKSLSSKNLPMEKLI 364

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +LQ+QG +E V+  RL+ T +G  +LD +I  LA
Sbjct: 365 DLQQQGLVEMVENQRLKATNKGRILLDYIINQLA 398


>gi|319404961|emb|CBI78563.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella sp.
           AR 15-3]
          Length = 398

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/394 (52%), Positives = 265/394 (67%), Gaps = 18/394 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC+ KCPYCDFNS+VR   V Q  F  +F  E+       GPR I+SIF GG
Sbjct: 4   FGIYIHWPFCMSKCPYCDFNSYVRINGVDQSRFANAFEREITTQAHEIGPRRITSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ PQ +  +L  +AKNWT+   VEIT+EANPSSVE N F+GY  AGVNR+SLGVQ
Sbjct: 64  GTPSLMTPQTVDRLLQAVAKNWTIDDKVEITLEANPSSVEANRFRGYHLAGVNRLSLGVQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +++L+ LGR HNA +A+ AI+LAR IFPR+SFDLIYA PKQT+ QW+ EL +A++ A
Sbjct: 124 ALNDKALQQLGRLHNAKQALHAINLARKIFPRLSFDLIYARPKQTLKQWKSELLQAINLA 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE GT F K+H  G L+LP+   A +LY LTQ IT+ HGL AYEISNH+ 
Sbjct: 184 TDHLSLYQLTIEDGTTFKKLHAAGKLILPASEQAANLYTLTQEITTMHGLPAYEISNHAI 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV-----------------KVGSHRVAISI-EKH 300
            GAES HNL YWRY +Y G GPGAH R                  K  +H   ++I EKH
Sbjct: 244 PGAESCHNLLYWRYHEYAGFGPGAHGRFIKQSLKNSSLFSEKLPSKTENHNRYVTINEKH 303

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PE+WL++V   GH  +  E LS EQQA+E L+MGLRL EG+ +  +E L  ++L  +   
Sbjct: 304 PENWLELVETTGHGCINTEHLSREQQANEMLLMGLRLTEGLDLIRYETLNRQSLSSKKLI 363

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +LQ+QG +E      L+ T +G   LD +I  LA
Sbjct: 364 HLQQQGLVEITDNKHLKATIKGRIFLDHIIYQLA 397


>gi|91974877|ref|YP_567536.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB5]
 gi|91681333|gb|ABE37635.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB5]
          Length = 385

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/385 (51%), Positives = 261/385 (67%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +  F ++F  E+       GPR 
Sbjct: 1   MGADPDKAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEARFARAFAREIAATAARIGPRD 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +  ILD I K+W V+ + E+++EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVGAILDAIGKHWRVTPDAEVSLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H A EA+ A+ +AR+ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKTLGRLHTAQEAMDAVAIARSAFDRYSFDLIYARPGQTPAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+RA+  A +HLSLYQLTIE  T F+ +H+ G L  P E+ +  LY++TQS+ +  GL A
Sbjct: 181 LRRAIGEAAEHLSLYQLTIEAETPFFALHRAGKLQTPDESASRALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R AI+ EK PESW+  V  
Sbjct: 241 YEISNHARPGAECKHNLVYWRGQEYAGIGPGAHGRLDIGGTRYAIATEKRPESWMMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            G  V+  + L+SE++ADEFL+MGLRL EGI  + ++ LAGR+LD      L  +G I  
Sbjct: 301 TGTGVITDDRLNSEERADEFLLMGLRLAEGIDPRRYQALAGRSLDPSRIALLCAEGAIVV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQAGFPVLDAVVADLAA 385


>gi|115522383|ref|YP_779294.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisA53]
 gi|115516330|gb|ABJ04314.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris BisA53]
          Length = 386

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/382 (52%), Positives = 263/382 (68%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
              N+ GVYVHWPFC+ KCPYCDFNSHVR   + +E ++ +F+ E++     TG R ++S
Sbjct: 5   DADNAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERYLSAFVREIETTAARTGAREVTS 64

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL++P  +  ILD I ++W V+ +VE+++EANP+SVE + F+GYR AGVNR+
Sbjct: 65  IFLGGGTPSLMQPSTVGGILDAIGRHWRVAGDVEVSMEANPTSVEASRFRGYRAAGVNRV 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQ+L++ SL+ LGR H A EA+ A+ +AR IF R SFDLIYA P+QT   W  EL+ 
Sbjct: 125 SLGVQALDDVSLKSLGRMHTAQEAMEAVGIARQIFDRYSFDLIYARPEQTPAMWADELRL 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++ A +HLSLYQLTIE  T F+ +H  G L  P E+    LY++TQ + +  GL AYEI
Sbjct: 185 AIAQAAEHLSLYQLTIEPETPFFGLHAAGKLRTPDEDTGRALYDVTQEVCAQAGLPAYEI 244

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R AI+ EK PE+WL  V   GH
Sbjct: 245 SNHARPGAECRHNLVYWRGQEYAGIGPGAHGRIDLGGRRHAIATEKRPEAWLMRVEACGH 304

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            VV  + L+SE++ADEFL+MGLRL EGI  + ++ LAGR LD      L  +G I     
Sbjct: 305 GVVTDDSLNSEERADEFLLMGLRLAEGIDPRRYQALAGRALDPARIATLLDEGAIVVDAD 364

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RLR TQ G  +LD+V+A+LA 
Sbjct: 365 GRLRVTQSGFPVLDAVVADLAA 386


>gi|319406449|emb|CBI80089.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella sp.
           1-1C]
          Length = 399

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/397 (51%), Positives = 266/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC+ KCPYCDFNS+VR   V Q  F  +F  E+    +  GPR I+SIF
Sbjct: 2   TKPFGIYIHWPFCMSKCPYCDFNSYVRTNGVDQPRFANAFEREITTQAKKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AKNWT+    EIT+EANPSSVE + F+GY+ AGVNR+SL
Sbjct: 62  IGGGTPSLMAPQTVDRLLQAVAKNWTIDDKAEITLEANPSSVEADRFRGYQLAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++L+ LGR H+  +A  AI+LAR IFPR+SFDLIYA PKQT+ QWE EL +A+
Sbjct: 122 GVQALNDKALQQLGRLHSVKQAFHAINLAREIFPRLSFDLIYARPKQTLKQWETELLQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A DHLSLYQLTIE GT F K+H  G L+LP    A +LY LTQ IT+ +GL AYEISN
Sbjct: 182 NLAADHLSLYQLTIEDGTTFKKLHAAGKLILPPSEQAANLYTLTQEITTMYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-----------------KVGSHRVAISI- 297
           H+  GAES HNL YWRY +Y G GPGAH R                  K+ +H   ++I 
Sbjct: 242 HAIPGAESRHNLLYWRYHEYAGFGPGAHGRFIKQSLKNSSFFPETFPSKIENHNRYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE+WL++V   GH  +E E LS EQQA+E L+MG+RL EG+ +  ++ L+ ++L  +
Sbjct: 302 EKHPENWLELVENTGHGCIETELLSQEQQANEMLLMGMRLAEGLDLARYKTLSCQSLPRK 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               LQ+QG IE      L+ T+ G   LD +I  LA
Sbjct: 362 KLIRLQKQGLIEITDNQHLKATKTGRIFLDHIIYQLA 398


>gi|90421847|ref|YP_530217.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB18]
 gi|90103861|gb|ABD85898.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris BisB18]
          Length = 386

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/378 (52%), Positives = 264/378 (69%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + GVY+HWPFC+ KCPYCDFNSHVR   + QE ++++F+ E++   + T  R ++SIF G
Sbjct: 9   AFGVYIHWPFCLSKCPYCDFNSHVRHVAIDQERYLRAFVREIETTAERTPGREVTSIFLG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P  +  IL+ I K+W V+++VEI++EANP+SVE   F+GYR AGVNR+SLGV
Sbjct: 69  GGTPSLMQPATVGGILEAIGKHWNVAADVEISMEANPTSVEATRFRGYRAAGVNRVSLGV 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L++ SL+ LGR H A EA+ A+ +AR+IF R SFDLIYA P QT   W+ ELQ+A+  
Sbjct: 129 QALDDLSLKTLGRLHTAQEAMEAVAIARSIFERYSFDLIYARPGQTPAMWQAELQKAIGE 188

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A +HLSLYQLTIE  T F+ +H  G L  P E  A  LY++TQ + +AHGL +YEISNH+
Sbjct: 189 AAEHLSLYQLTIEADTPFFGLHAAGKLQTPDEATARALYDVTQEVCAAHGLPSYEISNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V   GH VV 
Sbjct: 249 RAGAECRHNLLYWRGQEYAGIGPGAHGRLDINGIRHAIATEKRPEAWLMRVEACGHGVVV 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            + L+SE++ADEFL+MGLRL EGI    ++ L+GR LD      L+ +G I      RLR
Sbjct: 309 DDRLNSEERADEFLLMGLRLAEGIDPTRYQALSGRALDPARIAVLREEGAIVVDPNGRLR 368

Query: 378 CTQRGMTMLDSVIANLAV 395
            T  G  +LD+V+A+LA 
Sbjct: 369 VTLSGFPLLDAVVADLAA 386


>gi|158425915|ref|YP_001527207.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Azorhizobium caulinodans ORS 571]
 gi|158332804|dbj|BAF90289.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Azorhizobium caulinodans ORS 571]
          Length = 385

 Score =  418 bits (1075), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/385 (51%), Positives = 259/385 (67%), Gaps = 2/385 (0%)

Query: 11  MTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           MT Q +    GVYVHWPFC+ KCPYCDFNSHVR+    Q  ++ +F  E+  MR LTGPR
Sbjct: 1   MTAQDTAGGFGVYVHWPFCLAKCPYCDFNSHVRQAPPDQARYVAAFRREIAHMRALTGPR 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  S+FFGGGTPSL+ P+ +  ILD I + WT++ + EIT+EANP+SVE   F+GYR AG
Sbjct: 61  TAGSVFFGGGTPSLMAPETVGAILDAIREAWTLAPDAEITLEANPTSVEAGRFRGYRAAG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+SLGVQ+L++  L+ LGR H   EA+ A+ +AR+IF R+SFDLIYA P Q    W  
Sbjct: 121 VNRVSLGVQALDDGELKKLGRMHTVDEALGAVGIARSIFERVSFDLIYARPGQNPQDWAR 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL RA+    +HLSLYQLTIE GT F K++  G L++P +  A  L+++TQ +T+A GL 
Sbjct: 181 ELSRAIDEGCEHLSLYQLTIEPGTAFEKLYSAGKLLIPDDEHARALWDVTQEVTAASGLP 240

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           AYEISNH+  GAE+ HNL YWRYG Y G+GPGAH RV     R A   E+HPE WLK V 
Sbjct: 241 AYEISNHARPGAEARHNLVYWRYGLYAGVGPGAHGRVGQKGERRATYTERHPEGWLKAVE 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            NGH +V +E L++ +QADE L+MGLRL EG+ +     L G  +D      L  +G + 
Sbjct: 301 ANGHGIVSEEVLTAAEQADEMLLMGLRLAEGVDLARHAALGGTPIDPARIAMLADEGLV- 359

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           R+  +RL+    G  +L++VI  LA
Sbjct: 360 RLDGTRLKVLPPGFPVLNAVIGTLA 384


>gi|240137079|ref|YP_002961548.1| putative oxidase [Methylobacterium extorquens AM1]
 gi|240007045|gb|ACS38271.1| putative oxidase [Methylobacterium extorquens AM1]
          Length = 392

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/376 (51%), Positives = 249/376 (66%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+     L   R+++SIF GG
Sbjct: 16  FGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAALAPGRTVTSIFLGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 76  GTPSLMAPDTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+ YA
Sbjct: 136 ALDDGDLKRLGRLHSVAEALDAVRTASAHFERFSFDLIYARPEQTPEAWAAELRRAIDYA 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I    GL AYEISNH+ 
Sbjct: 196 AEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICGRAGLPAYEISNHAR 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V ++GH +VE 
Sbjct: 256 PGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEDWLARVERDGHGIVET 315

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R+  
Sbjct: 316 ETLSAEDQGDEFLMMGLRLTEGIDSARYASLKGRPLHAGRLDALARDGLVARRPDGRIAA 375

Query: 379 TQRGMTMLDSVIANLA 394
           T RG  +L++V+A LA
Sbjct: 376 TARGAPVLNAVVAELA 391


>gi|298293790|ref|YP_003695729.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
 gi|296930301|gb|ADH91110.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
          Length = 381

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/377 (50%), Positives = 249/377 (66%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC  KCPYCDFNSHVR     Q  F+++F  E+   R+  G R   S+FFGG
Sbjct: 5   FGVYVHWPFCKAKCPYCDFNSHVRHSPPDQARFLKAFRAEIAHTRERIGQRRTQSVFFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  +  ILD I + W + +  E+T+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 65  GTPSLMEPATVGAILDAINEAWPLDARAEVTLEANPTSVEAGRFRGYRAAGVNRVSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL+ LGR H A EA+ A+ +AR  F R+SFDLIYA P Q    W  EL+RA+   
Sbjct: 125 ALDDASLKALGRMHTAQEALGAVAVARAAFERVSFDLIYARPDQKPEAWAAELKRAIEEG 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F  +H+ G L++P + VA  L+++TQ  T   GL +YE+SNH+ 
Sbjct: 185 CEHLSLYQLTIEDGTPFAALHRAGKLIVPEDEVARALWDVTQETTREAGLPSYEVSNHAR 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y G+GPGAH R+     RVA S E+ PE W+  V   GH V+  
Sbjct: 245 PGAESRHNLLYWRYGEYAGLGPGAHGRLDTPEGRVATSTERGPEDWVARVEHAGHGVIVD 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+  +QADE+L+MGLRL EGI    +  LAG +LD      L     IE +   RLR 
Sbjct: 305 ERLTRAEQADEYLLMGLRLAEGIDRARFARLAGHDLDAGRVATLIEDAMIEELPGERLRA 364

Query: 379 TQRGMTMLDSVIANLAV 395
           T  G+ +LD+++A+LA 
Sbjct: 365 TALGLPVLDAIVADLAA 381


>gi|188579739|ref|YP_001923184.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           populi BJ001]
 gi|179343237|gb|ACB78649.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           populi BJ001]
          Length = 392

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/376 (51%), Positives = 246/376 (65%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+HWPFC  KCPYCDFNSHVR   V Q  F+++F  E+     L   R ++SIF GG
Sbjct: 16  FGVYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLEAFRREIAHAAALAPGRMVTSIFLGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A +LD +A  W V+ + E+T+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 76  GTPSLMAPETVAGLLDAVAGAWAVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++  L+ LGR H+  EA++A+  A   F R SFDLIYA P QT   W  EL+RA++YA
Sbjct: 136 ALDDGDLKRLGRLHSVEEALSAVRTAAAHFERFSFDLIYARPDQTAQAWAAELRRAIAYA 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I  A GL AYEISNH+ 
Sbjct: 196 AEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICEAAGLPAYEISNHAR 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V + GH +   
Sbjct: 256 PGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEGWLARVEREGHGITGT 315

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS E Q DEFLMMGLRL EGI    +  L GR LD      L   G + R    R+  
Sbjct: 316 ESLSPEDQGDEFLMMGLRLSEGIDPDRYAALKGRPLDATRLEALVTDGLVARRPNGRIAA 375

Query: 379 TQRGMTMLDSVIANLA 394
           T RG  +L++V+A LA
Sbjct: 376 TARGAPVLNAVVAELA 391


>gi|218528484|ref|YP_002419300.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           chloromethanicum CM4]
 gi|218520787|gb|ACK81372.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           chloromethanicum CM4]
          Length = 398

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/376 (51%), Positives = 248/376 (65%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+    +L   R+++SIF GG
Sbjct: 22  FGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAELAPGRTVTSIFLGG 81

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 82  GTPSLMAPDTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQ 141

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+ YA
Sbjct: 142 ALDDGDLKRLGRLHSVAEALDAVRTAAAHFERFSFDLIYARPEQTPEAWAAELRRAIDYA 201

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F+ + + G LV P ++    LY++TQ I    GL AYEISNH+ 
Sbjct: 202 AEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDATRALYDVTQEICGLAGLPAYEISNHAR 261

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V ++G  VVE 
Sbjct: 262 PGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEEWLARVERDGDGVVET 321

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R+  
Sbjct: 322 ETLSAEDQGDEFLMMGLRLTEGIDPARYATLKGRPLHAGRLDALVRDGLVARRPDGRIAA 381

Query: 379 TQRGMTMLDSVIANLA 394
           T RG  +L++V+A LA
Sbjct: 382 TARGAPVLNAVVAELA 397


>gi|163849853|ref|YP_001637896.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           extorquens PA1]
 gi|163661458|gb|ABY28825.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           extorquens PA1]
          Length = 405

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/376 (51%), Positives = 248/376 (65%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+     L   R+++SIF GG
Sbjct: 29  FGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAALAPGRTVTSIFLGG 88

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 89  GTPSLMAPDTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQ 148

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+ YA
Sbjct: 149 ALDDGDLKRLGRLHSVAEALDAVRTASAHFERFSFDLIYARPEQTPEAWAAELRRAIDYA 208

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I    GL AYEISNH+ 
Sbjct: 209 AEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICGLAGLPAYEISNHAR 268

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE W   V ++GH +VE 
Sbjct: 269 PGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEEWRARVERDGHGIVET 328

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R+  
Sbjct: 329 ETLSAEDQGDEFLMMGLRLTEGIDPARYATLKGRPLHAGRLDALVRDGLVARRPDGRIAA 388

Query: 379 TQRGMTMLDSVIANLA 394
           T RG  +L++V+A LA
Sbjct: 389 TARGAPVLNAVVAELA 404


>gi|254559087|ref|YP_003066182.1| oxidase [Methylobacterium extorquens DM4]
 gi|254266365|emb|CAX22129.1| putative oxidase [Methylobacterium extorquens DM4]
          Length = 392

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/376 (51%), Positives = 248/376 (65%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+     L   R+++SIF GG
Sbjct: 16  FGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAALAPGRTVTSIFLGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 76  GTPSLMAPNTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSLGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+ YA
Sbjct: 136 ALDDGDLKRLGRLHSVAEALDAVRTASAHFERFSFDLIYARPEQTPEAWAAELRRAIDYA 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I    GL AYEISNH+ 
Sbjct: 196 AEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICGLAGLPAYEISNHAR 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA+S HN  YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V ++GH +VE 
Sbjct: 256 PGAQSRHNQLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEDWLARVERDGHGIVET 315

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R+  
Sbjct: 316 ETLSAEDQGDEFLMMGLRLTEGIDPARYATLKGRPLHAGRLDALVRDGLVARRPDGRIAA 375

Query: 379 TQRGMTMLDSVIANLA 394
           T RG  +L++V+A LA
Sbjct: 376 TARGAPVLNAVVAELA 391


>gi|217978308|ref|YP_002362455.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
 gi|217503684|gb|ACK51093.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
          Length = 389

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/387 (48%), Positives = 255/387 (65%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           +++        GVYVHWPFC+ KCPYCDFNSHVR   V +  F  + + E+    + T  
Sbjct: 3   DDLQNGADPGFGVYVHWPFCLSKCPYCDFNSHVRHEPVDEARFGSALIREIAHRAETTRG 62

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++SIFFGGGTPSL+    +A +++ I ++WT++   EIT+EANP+SVE   F G+R A
Sbjct: 63  RRVASIFFGGGTPSLMSASTVARVIEAIDRHWTLAPGAEITLEANPTSVEATKFAGFRAA 122

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GVNR+S+GVQ+L +  L+ LGR H++ EA+AA+ +AR  F R SFDLIYA   Q++ QW 
Sbjct: 123 GVNRVSIGVQALNDADLKALGRTHSSVEALAALEIARKTFERFSFDLIYARAGQSVAQWR 182

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            EL  AL+ A DHLSLYQLTIE GT+F +M   G LV+P  ++  D ++ TQ I +  GL
Sbjct: 183 SELASALALARDHLSLYQLTIEPGTMFERMRDAGKLVVPGPDLGRDFWDATQEIMNGAGL 242

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            AYEISNH+  GAES HNL YWR GDY G+GPGAH R+   + R A + E+ P+ WL  V
Sbjct: 243 PAYEISNHARPGAESRHNLIYWRTGDYAGVGPGAHGRITGQNKRRAQATERDPQKWLSAV 302

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
              GH ++E + LS E+Q DEFL+MGLRL EGI    +E ++GR LD    ++L   G +
Sbjct: 303 ESAGHGLIEDDVLSREEQGDEFLLMGLRLAEGIEPGRFEAMSGRGLDPRRVQSLIADGMV 362

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E     RLR +  G  +LD+V+A+LA 
Sbjct: 363 EYTSGGRLRVSAEGFPLLDAVVADLAA 389


>gi|27375783|ref|NP_767312.1| coproporphyrinogen III oxidase [Bradyrhizobium japonicum USDA 110]
 gi|27348921|dbj|BAC45937.1| oxygen-independent coproporphyrinogen III oxidase [Bradyrhizobium
           japonicum USDA 110]
          Length = 373

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/373 (51%), Positives = 252/373 (67%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +HWPFC+ KCPYCDFNSHVR   + +  F  +F  E++   Q    R ++SIF GGGTPS
Sbjct: 1   MHWPFCLSKCPYCDFNSHVRHAAIDEARFASAFAREIETTAQRAPGREVTSIFLGGGTPS 60

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L++P  +  +LD I K+W V+ +VE+T+EANP+SVE   F GYR AGVNR+SLGVQ+L++
Sbjct: 61  LMQPATVGAVLDSIGKHWQVARDVEVTLEANPTSVEATRFAGYRAAGVNRVSLGVQALDD 120

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            SL+ LGR H+A EA+ A+ +AR  F R SFDLIYA P QT   W  EL+ A++ A +HL
Sbjct: 121 ASLKALGRMHSAREALDAVAIARRSFERYSFDLIYARPDQTPAMWADELRLAIAEAAEHL 180

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           SLYQLTIE+GT F+ +H+ G L  P E VA  LY++TQ      GL AYEISNH+  GAE
Sbjct: 181 SLYQLTIEEGTPFFGLHQAGKLKTPDEAVARALYDVTQETCDKLGLPAYEISNHARRGAE 240

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLS 322
             HNL YWR  +Y GIGPGAH R+ +   R A + EK PE+WL  V  NGH VV  + L+
Sbjct: 241 CRHNLVYWRGDEYAGIGPGAHGRLDIDGIRHATATEKRPEAWLLRVETNGHGVVTDDLLN 300

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
           SE++ADEFL+MGLRL EGI  + +  L+GR LD +    L+ +G I      RLR T  G
Sbjct: 301 SEERADEFLLMGLRLAEGIDPERYTALSGRALDPKRIALLREEGAITVDATGRLRVTSSG 360

Query: 383 MTMLDSVIANLAV 395
             +LD+V+A+LA 
Sbjct: 361 FPVLDAVVADLAA 373


>gi|288956858|ref|YP_003447199.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
 gi|288909166|dbj|BAI70655.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
          Length = 394

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/389 (49%), Positives = 256/389 (65%), Gaps = 6/389 (1%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++ GQ      VYVHWPFC  KCPYCDFNSHVR  +V  + +    L E+     LT  
Sbjct: 6   GSVPGQDGPGFAVYVHWPFCKSKCPYCDFNSHVRE-RVDHDRWRAGLLRELDHYADLTAG 64

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+++SIFFGGGTPSL+EP  +  I+D +A+ W V+  +E+T+EANP+SVE + F+ +R A
Sbjct: 65  RTVTSIFFGGGTPSLMEPATVGAIIDRVAQRWPVAERLEVTLEANPTSVEADKFRAFRGA 124

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G+NR+SLG+Q+L++ SL+FLGR H+A+EA  AI LA  IF R SFDLIYA P QT+  W+
Sbjct: 125 GINRVSLGIQALDDTSLKFLGRQHSAAEATGAITLAARIFDRFSFDLIYARPGQTVAAWQ 184

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            EL RAL +AV HLS+YQLTIE+GT F+ +H  GDLVLP E++A DLY  TQS  +A GL
Sbjct: 185 AELARALDHAVGHLSVYQLTIEEGTAFHPLHARGDLVLPDEDLAGDLYEATQSQLAAAGL 244

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            AYEISNH+ LG ES HNL YWRYGDY+GIGPGAH R+ +   + A    + PE WL+ V
Sbjct: 245 PAYEISNHARLGEESRHNLTYWRYGDYVGIGPGAHGRLTLDGEKFATRAHRAPEIWLERV 304

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE----RNLQR 364
            ++GHA    + +  + +  E LMMGLRL EG+ +       GR LD   +      L  
Sbjct: 305 ERDGHAAAPPDPIDRDARGTELLMMGLRLTEGVRLSRLVEETGRTLDEFVDPAALSRLID 364

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            GF+ R    RL  T  G+  L++V+  +
Sbjct: 365 GGFLSR-DAKRLVATSEGLQRLNAVLGAI 392


>gi|323137232|ref|ZP_08072311.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
 gi|322397590|gb|EFY00113.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
          Length = 388

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 184/377 (48%), Positives = 255/377 (67%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC+ KCPYCDFNSHVRR  V ++ F+++F  E+     L   R + S+FFGG
Sbjct: 12  FGVYVHWPFCLSKCPYCDFNSHVRRGDVDEDRFVEAFAVELAHRASLAPGREVRSVFFGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  IL  IA +WT++ +VEIT+EANP+SVE + F+G++ AG+NR+SLG+Q
Sbjct: 72  GTPSLMSPSTVEAILSQIASHWTMARDVEITLEANPTSVEASRFKGFKAAGINRVSLGIQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+ +EA+ A+ +A ++F R SFDLIY    QT   W  EL  AL+ A
Sbjct: 132 ALNDIDLKGLGRQHSVAEALMALDIANSVFDRTSFDLIYGRTGQTPAAWRKELDLALARA 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+SLYQLTIE  TLF +M   G + +P  +    L+++TQ +T+ HGL +YE+SNH+ 
Sbjct: 192 PEHVSLYQLTIEPDTLFERMVNTGKMTVPDVDTQRALWDVTQEVTARHGLPSYEVSNHAR 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAE  HNL YWRYG+Y G+GPGAH R+     R A + E+HPE WL  V   GH +VE 
Sbjct: 252 PGAECRHNLVYWRYGEYAGVGPGAHGRIVTTRGRRAQATERHPEMWLTCVETEGHGLVED 311

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L++EQ+ DEFL+MGLRLREGI  + + +L G+ L       L   G +E  + +RLR 
Sbjct: 312 ELLNAEQEGDEFLLMGLRLREGIDPQRYFLLTGKKLSQSRISELIGDGLVEVTRENRLRV 371

Query: 379 TQRGMTMLDSVIANLAV 395
           +  G  +LD+V+A+LA 
Sbjct: 372 SSEGFPVLDAVVADLAA 388


>gi|170738391|ref|YP_001767046.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
 gi|168192665|gb|ACA14612.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
          Length = 398

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/377 (49%), Positives = 249/377 (66%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+HWPFC  KCPYCDFNSHVR     +  +  +F  E+     L   R+++S+F GG
Sbjct: 22  FGVYLHWPFCAAKCPYCDFNSHVRHAPPDEAAWRAAFAREIAHAAALAPGRTVTSVFLGG 81

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +  +LD +A  WTV+   EIT+EANP+SVE + F+GYR AGVNR+SLGVQ
Sbjct: 82  GTPSLMQPATVGALLDAVAAAWTVAPGAEITLEANPTSVEADRFRGYRLAGVNRVSLGVQ 141

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ +LR LGR H+A+EA+AA+  A   F R SFDLIYA P QT   W  EL++A++ A
Sbjct: 142 ALDDGALRRLGRLHSAAEALAAVETASRHFARFSFDLIYARPDQTPAAWAAELRQAIARA 201

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE+GT F+ +   G LV P E+ A  L+++TQ +  A GL AYEISNH+ 
Sbjct: 202 AEHLSLYQLTIEEGTPFHGLAAAGRLVPPDEDTARALFDVTQEVCGAAGLPAYEISNHAR 261

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y GIGPGAH R+ +   R     E+ PE+WL  V + GH +V  
Sbjct: 262 PGAESRHNLLYWRYGEYAGIGPGAHGRLVLPGGRTGTVTERAPEAWLARVAREGHGIVRT 321

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+  ++ DEFL+MGLRL EGI    +  LAGR LD      L  +  +   Q  R+  
Sbjct: 322 EALTQAEEGDEFLVMGLRLAEGIDPARFARLAGRPLDRRRLDGLLAEDLVRVTQAGRIAA 381

Query: 379 TQRGMTMLDSVIANLAV 395
           T +G  +L++V+A LA 
Sbjct: 382 TPKGAPVLNAVVAELAA 398


>gi|154254013|ref|YP_001414837.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parvibaculum lavamentivorans DS-1]
 gi|154157963|gb|ABS65180.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parvibaculum lavamentivorans DS-1]
          Length = 385

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/359 (52%), Positives = 243/359 (67%), Gaps = 1/359 (0%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +G      GVYVHWPFC  KCPYCDFNSHV    V Q  + ++   E+Q+MR LTGPRS+
Sbjct: 4   SGADEPGFGVYVHWPFCQSKCPYCDFNSHVV-ANVDQARWAKALTRELQYMRGLTGPRSV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIFFGGGTPSL EP  +  +L  IA  WTV    EIT+EANP+SVE   F+GYRKAGVN
Sbjct: 63  RSIFFGGGTPSLTEPATVEAVLTQIAALWTVEQGAEITLEANPTSVEAARFRGYRKAGVN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQSL+++ L+FLGR H A EA+ AI LAR  FPR+SFDLIYA P QT  +W  EL
Sbjct: 123 RLSLGVQSLDDRELKFLGRLHTADEALRAIALARETFPRLSFDLIYARPGQTKEKWTAEL 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + AL++AVDHLSLYQLTIE+ T F ++++ G   LP E+ A +LY LT  I +  GL AY
Sbjct: 183 RAALAHAVDHLSLYQLTIEEETAFARLYEKGAFKLPGEDEAAELYALTGEIAAEAGLSAY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN++  GAE+ HNL YWRYGDY G+GPGAH R+     R+A    + P +W++ V ++
Sbjct: 243 EVSNYARPGAEARHNLVYWRYGDYAGVGPGAHGRISTEGKRLATRTLRMPGAWIENVERD 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           GH +   E +    Q DE ++MGLRL EG+S+  +  LAG+ +      NL   G + R
Sbjct: 303 GHGLEASEEIPGAAQGDEMMLMGLRLEEGVSLARYAALAGKEIAAPRIGNLIADGLLMR 361


>gi|170749348|ref|YP_001755608.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655870|gb|ACB24925.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 391

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/378 (51%), Positives = 252/378 (66%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             G+Y+HWPFC  KCPYCDFNSHVRR  V +  F+ +F  E+      T  R+++SIF G
Sbjct: 14  GFGIYLHWPFCAAKCPYCDFNSHVRRAGVDEPRFLAAFRAEIAHNAARTPGRTVTSIFLG 73

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P  +A +LD +A +W V+ + E+T+EANPSSVE   F GYR AGVNR+SLG+
Sbjct: 74  GGTPSLMQPATVAGLLDAVAAHWAVAPDAEVTLEANPSSVEAGRFHGYRAAGVNRVSLGI 133

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L++ SLR LGR H+ ++A+ AI LA++ F R SFDLIYA P QT   W  EL  AL+ 
Sbjct: 134 QALDDASLRTLGRLHDTAQALDAIALAQSAFARTSFDLIYARPGQTPALWRAELAEALAR 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A +HLSLYQLTIE GT F+ +   G LV P + V   LY++TQ + +  GL AYEISNH+
Sbjct: 194 AAEHLSLYQLTIEPGTPFHGLAAAGKLVTPDDEVGRALYDVTQDLCARAGLPAYEISNHA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HNL YWRYG+Y GIGPGAH R+     R+    E+ PE+WL  V   GH +VE
Sbjct: 254 RPGAESRHNLLYWRYGEYAGIGPGAHGRLVTPGGRLGTVTERSPEAWLARVEAEGHGIVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E L++  QADEFL+MGLRLREGI    +  L GR L+      L   G +ER+   R+ 
Sbjct: 314 TEILTAADQADEFLVMGLRLREGIDPDTYAALKGRPLNGNRIGMLIGDGLLERLPGGRIA 373

Query: 378 CTQRGMTMLDSVIANLAV 395
            T RG  +L++++A LA 
Sbjct: 374 ATARGAPVLNALVAELAA 391


>gi|182680298|ref|YP_001834444.1| oxygen-independent coproporphyrinogen III oxidase [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182636181|gb|ACB96955.1| oxygen-independent coproporphyrinogen III oxidase [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 402

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 253/381 (66%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G  + G+Y+HWPFC+ KCPYCDFNSHVR   + +  F+     E+     LT  R +SSI
Sbjct: 22  GEPAFGIYLHWPFCLSKCPYCDFNSHVRAEPIDEPRFLSGLKRELAHRASLTPGRQVSSI 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL++   +A ++D IA +W ++  VEIT+EANP+SVE   F  YR AGVNR+S
Sbjct: 82  FFGGGTPSLMQGSTVAALIDAIAGHWPLAPQVEITLEANPTSVEAERFAAYRAAGVNRVS 141

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+L++ +L+ LGR H+A+EA+ A+  A ++F R SFDLIY  P QT+  W  EL  A
Sbjct: 142 LGVQALDDAALQSLGRKHSAAEALRAVKTAASLFERYSFDLIYGRPGQTLADWRRELGDA 201

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L YA DHLSLYQLTIE  T F ++   G   LP  ++  DL++LTQ + +  GL AYE+S
Sbjct: 202 LHYARDHLSLYQLTIEPETPFAQLAASGRFTLPEADLGRDLWDLTQEVMNKAGLPAYEVS 261

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYG+Y G+GPGAH R+     R A +  + P+ WLK V + G  
Sbjct: 262 NHARPGAESRHNLLYWRYGEYAGVGPGAHGRLLTPHGRRAQATLRQPDLWLKTVEERGEG 321

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           + E   L+ E+QADEFL+MGLRL EGI+ +++  +AGR+ D    + L  +G +E     
Sbjct: 322 LTEDMPLTREEQADEFLLMGLRLTEGIAPENFRAVAGRDFDPRRLQTLLSEGMLEYTPHG 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+R +  G  +LD+VIA+LA 
Sbjct: 382 RVRVSAEGFPVLDAVIADLAA 402


>gi|296447431|ref|ZP_06889356.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
 gi|296255051|gb|EFH02153.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
          Length = 389

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 184/377 (48%), Positives = 252/377 (66%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC+ KCPYCDFNSHVR+ +V ++ F+ +F TE++    L   R   S+FFGG
Sbjct: 13  FGVYVHWPFCLSKCPYCDFNSHVRKGEVDEDRFVDAFRTELRHRAALAPGRETRSVFFGG 72

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  IL  I   W ++ +VE+T+EANP+SVE + F+ ++ AGVNR+SLGVQ
Sbjct: 73  GTPSLMSASTVEAILREIGDCWPLAPDVEVTLEANPTSVEASRFRSFKAAGVNRVSLGVQ 132

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR H  +EA+AA+ +A  +F R SFDLIYA P+QT   W  EL+ AL+  
Sbjct: 133 ALNDIELRALGRQHTVAEALAALDVANKVFERTSFDLIYARPQQTPAAWRKELELALARV 192

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+SLYQLTIE  T+F +M++ G L +P  +    L+++TQ +T+  GL AYE+SNH+ 
Sbjct: 193 TEHVSLYQLTIEPETMFERMYEAGKLEVPDTDTQRALWDVTQEMTARAGLPAYEVSNHAR 252

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YWRYG+Y G+GPGAH R+     R A + E+HPE WL +V   GH +VE 
Sbjct: 253 PGGECRHNLVYWRYGEYAGVGPGAHGRLITPRGRRAQATERHPEMWLTVVESEGHGLVED 312

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E LS+EQ+ DEFL+MGLRLREGI    +  L G+ L       L   G +E  + +RLR 
Sbjct: 313 ELLSAEQEGDEFLLMGLRLREGIDPGRFFALTGKKLSQSRVSELVGDGLVELTRDNRLRV 372

Query: 379 TQRGMTMLDSVIANLAV 395
           +  G  +LD+V+A+LA 
Sbjct: 373 SSEGFPVLDAVVADLAA 389


>gi|300024894|ref|YP_003757505.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526715|gb|ADJ25184.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 474

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/359 (51%), Positives = 238/359 (66%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + S GVYVHWPFC +KCPYCDFNSHVR     +  F+ +++ E+     L G R++SSIF
Sbjct: 49  APSFGVYVHWPFCAQKCPYCDFNSHVRFGGWDEARFLAAYVREIDATADLIGARTVSSIF 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P   A ILD IAK WT++ + EIT+EANP+SVE   F+G+R+AGVNR+S+
Sbjct: 109 FGGGTPSLMQPATTAAILDHIAKRWTIAPDAEITLEANPNSVEAARFRGFREAGVNRVSI 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL +  LR LGR H+ +EA AA+ +A + F R SFDLIYA PKQT   W  EL  AL
Sbjct: 169 GVQSLRDDELRKLGRIHSVAEAKAALDVAHSTFDRFSFDLIYARPKQTPDAWRAELSEAL 228

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE  T +  +H  G LV+P ++ A  LY +T  +T+A GL AYE+SN
Sbjct: 229 DLAGDHLSLYQLTIEPDTAYAALHAKGKLVIPDDDAARALYEITDELTAARGLAAYEVSN 288

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G+ES HNL YWRYG+Y GIG GAH R+ V   R A   E++PE+W + V  +G  V
Sbjct: 289 YARPGSESRHNLLYWRYGEYAGIGAGAHGRIIVKGQRTATVTERNPEAWAERVEASGTGV 348

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           VE   L+ E+QADE L+MGLRL EG+ +     L G          L   G +E V  S
Sbjct: 349 VESTVLTLEEQADEMLLMGLRLSEGVDLDQLAALGGVRPAAHVVGGLIAMGLLEVVAAS 407


>gi|220920080|ref|YP_002495381.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
 gi|219944686|gb|ACL55078.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
          Length = 387

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/377 (50%), Positives = 254/377 (67%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+HWPFC  KCPYCDFNSHVR     +  +  +F  E+  +  LT  R+++SIFFGG
Sbjct: 11  FGVYLHWPFCAAKCPYCDFNSHVRHAPPDEAVWRAAFAREIAHVSALTPGRTVTSIFFGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +  +LD +A  W++S + EIT+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 71  GTPSLMQPATVGALLDAVAGAWSLSPDAEITLEANPTSVEAERFRGYRLAGVNRVSLGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL+ LGR H+A+EA+AA+  A   F R SFDLIYA P QT   W  EL+ A++ A
Sbjct: 131 ALDDASLKRLGRLHSAAEALAAVATAARHFERYSFDLIYARPDQTQAAWAAELREAIARA 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE+GT F+ +   G LV P E+ A  L+++TQ + +A GL AYEISNH+ 
Sbjct: 191 AEHLSLYQLTIEEGTPFHGLAAAGKLVTPDEDAARALFDVTQEVCAAAGLPAYEISNHAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y GIGPGAH R+ +   R     E+ PE+WL  V ++GH +V  
Sbjct: 251 PGAESRHNLLYWRYGEYAGIGPGAHGRLVLPEGRTGTVTERVPEAWLARVARDGHGIVTM 310

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L   ++ADEFL+MGLRL EGI    +  LAGR +D      L ++G I      R+  
Sbjct: 311 EPLKPAEEADEFLLMGLRLAEGIDPARFAALAGRPIDRGRLDALVQEGLIALTGSGRIAA 370

Query: 379 TQRGMTMLDSVIANLAV 395
           T +G  +L++++A LA 
Sbjct: 371 TPKGAPVLNALVAELAA 387


>gi|83950769|ref|ZP_00959502.1| coproporphyrinogen III oxidase [Roseovarius nubinhibens ISM]
 gi|83838668|gb|EAP77964.1| coproporphyrinogen III oxidase [Roseovarius nubinhibens ISM]
          Length = 385

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/379 (49%), Positives = 254/379 (67%), Gaps = 4/379 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+YVHWPFC  KCPYCDFNSHV    + Q+ +++S+L E++    L   R ++SIFF
Sbjct: 8   GGFGIYVHWPFCQSKCPYCDFNSHVTA-SIDQDAWLESYLAEIKRYSDLLPGRVVNSIFF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++P  +  ++D I K WT++++VEIT+EANP SVE   F GYR+AGVNRIS+G
Sbjct: 67  GGGTPSLMQPHVVGGVIDAIGKGWTLANDVEITLEANPGSVEAGRFLGYREAGVNRISMG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L +  LR LGR H+ SEA+ A  +AR+ F R+SFDLIYA   QT+  WE EL RAL+
Sbjct: 127 IQALNDPDLRRLGRLHSVSEALQAFDVARSTFSRVSFDLIYARQDQTLADWEAELTRALT 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           YAVDHLSLYQLTIE+GT F   +  G L  LP+++ A D+Y+LTQ+I + HG+ AYEISN
Sbjct: 187 YAVDHLSLYQLTIEQGTAFGDRYNRGLLKGLPADDSAADMYDLTQTICADHGMPAYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRYGDY+GIGPGAH R+ VG  + A    + P  WL  V KNG   
Sbjct: 247 HAGPGAQSRHNLIYWRYGDYVGIGPGAHGRITVGGRKFATEAHRAPGKWLAEV-KNGSGD 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             K  +   +Q  E+L+M LRL EG+    +  LA R+   +    L+  G I       
Sbjct: 306 SAKNEVIGPEQGLEYLLMCLRLTEGLDRDRYRTLAQRDFAPDTLAELRDMGMIV-ADDQN 364

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T++G  +L++++A LA
Sbjct: 365 LRLTEKGRPVLNAILAELA 383


>gi|154246478|ref|YP_001417436.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Xanthobacter autotrophicus Py2]
 gi|154160563|gb|ABS67779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Xanthobacter autotrophicus Py2]
          Length = 399

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/377 (50%), Positives = 252/377 (66%), Gaps = 2/377 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             GVYVHWPFC  KCPYCDFNSHVR     +  FI +F  E+  MR L+GP+   ++FFG
Sbjct: 24  GFGVYVHWPFCKAKCPYCDFNSHVRHAPPDEARFIAAFRREIAHMRALSGPKQAQTVFFG 83

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P  +A IL+ I   W ++++ E+T+EANP+SVE   F GY  AGVNR+SLGV
Sbjct: 84  GGTPSLMAPATVAAILEAINAAWPLTADAEVTLEANPTSVEAERFAGYGAAGVNRVSLGV 143

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L +  L+ LGR H+ +EA+AA+ +AR  F R+SFDLIYA P+QT   W  EL+RAL+ 
Sbjct: 144 QALHDADLQGLGRMHSVAEALAAVAIARRAFRRVSFDLIYARPRQTPEGWAAELRRALAE 203

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLYQLTIE GT F +++  G L+LP ++++  L+++TQ +T+  GL AYE+SNH+
Sbjct: 204 GCEHLSLYQLTIEPGTPFERLYGAGKLILPDDDISRALWDVTQEVTAQAGLPAYEVSNHA 263

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAE+ HN  YWRYG Y GIG GAH R+ V   R A+  E+ PE WL  V  +GH +V 
Sbjct: 264 RPGAEARHNQIYWRYGTYAGIGAGAHGRLVVDGTRRALFTERAPEDWLARVEAHGHGIVS 323

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E LS+ +QADE L+MGLRL+EG+ +     L GR +D      L   GF+ R    RL 
Sbjct: 324 DEALSAAEQADEMLLMGLRLKEGVDLARHARLGGR-VDEARIAALAAAGFVTRTG-DRLA 381

Query: 378 CTQRGMTMLDSVIANLA 394
            T  G  +L++VIA LA
Sbjct: 382 VTPAGFPVLNAVIAQLA 398


>gi|89067429|ref|ZP_01154942.1| coproporphyrinogen III oxidase [Oceanicola granulosus HTCC2516]
 gi|89046998|gb|EAR53052.1| coproporphyrinogen III oxidase [Oceanicola granulosus HTCC2516]
          Length = 369

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/372 (48%), Positives = 246/372 (66%), Gaps = 6/372 (1%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +HWPFC  KCPYCDFNSHV    + Q  + ++  +E+   R+ TGPR + S+FFGGGTPS
Sbjct: 1   MHWPFCQAKCPYCDFNSHVV-SGIDQTRWARALASEIARYREETGPRLLRSVFFGGGTPS 59

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L+ P+ +  +L  + + W + ++ E+T+EANP+SVE   F+GYR AGVNR+SLGVQ+L +
Sbjct: 60  LMLPETVDTVLQAVRRAWPMVNDPEVTLEANPTSVEAGRFRGYRDAGVNRVSLGVQALND 119

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             LR LGR H+  EA AA  LAR++FPR+SFDLIYA   Q +  W  EL++AL+ AVDHL
Sbjct: 120 ADLRRLGRLHDMREARAAFELARDVFPRVSFDLIYARQDQELAAWRAELEQALTMAVDHL 179

Query: 203 SLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           SLYQLTIE+GT F   ++ G L  LP+E+ AVDL+ +TQ + +A G+  YE+SNH+   A
Sbjct: 180 SLYQLTIEEGTAFGDRYRAGKLAGLPNEDRAVDLWEVTQEVCAAAGMENYEVSNHARPEA 239

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFL 321
           ES HNL YWRYGDY+G+GPGAH R+ V   R+A    + P +WL  V   GH  V +E L
Sbjct: 240 ESRHNLVYWRYGDYVGVGPGAHGRITVDGRRIATEALRAPGAWLAQVEATGHGDVAREAL 299

Query: 322 SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQR 381
            +E Q  E L+MG+RLREG+ +   E L     D+   R L   GF+E +   RLR T  
Sbjct: 300 DAEAQLAEVLLMGMRLREGVDLARVEAL---GFDVAAARGLVDGGFVE-LTGGRLRLTPA 355

Query: 382 GMTMLDSVIANL 393
           G  +L+ V+  L
Sbjct: 356 GWPVLNGVLREL 367


>gi|146278694|ref|YP_001168853.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556935|gb|ABP71548.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 385

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/380 (49%), Positives = 251/380 (66%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQSRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP+ +A IL+ +   W +++++E+T+EANP SVE   F+G+R AGVNRIS+
Sbjct: 65  FGGGTPSLMEPELVAAILETVRATWPLANDLEVTLEANPGSVEAGRFRGFRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q++  W  EL  AL
Sbjct: 125 GIQALNDADLRQLGRLHTVAEARAAFDVARTTFDRVSFDLIYARQDQSLADWRQELSEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLTIE GT F +  K G L  LP E ++ D+Y LTQ +  A GL AYEIS
Sbjct: 185 AMAADHLSMYQLTIEDGTAFGERFKRGKLRGLPEEELSADMYALTQDLCDAAGLPAYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G GPGAH RV + + R A    K P  WL+ V ++G+ 
Sbjct: 245 NHAQPGAESRHNLIYWRGGDYAGAGPGAHGRVSLATGRWATEAPKAPGGWLERVERDGNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            + +  L  +  A E+LMM LRLREG+  +    LAGR LD     +LQ  G IE    +
Sbjct: 305 ELPRVRLDRDDHALEYLMMALRLREGLDSERHAALAGRPLDERRVTDLQEMGMIE-TDGA 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T RG  +L+SVIA+LA
Sbjct: 364 RLRATTRGRMVLNSVIASLA 383


>gi|209966228|ref|YP_002299143.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Rhodospirillum centenum SW]
 gi|209959694|gb|ACJ00331.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Rhodospirillum centenum SW]
          Length = 387

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/387 (47%), Positives = 246/387 (63%), Gaps = 6/387 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M+        +YVHWPFC  KCPYCDFNSHVR   + QE +  + L E+     L   R 
Sbjct: 1   MSVPSDPGFALYVHWPFCASKCPYCDFNSHVRE-GIDQERWRAALLRELDHFAALAPGRR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++S+FFGGGTPSL+ P  +  +L     +W + +  E+T+EANP+SVE   F+ +R AGV
Sbjct: 60  LTSVFFGGGTPSLMAPATVEALLRRADGHWGLPAGTEVTLEANPTSVEAGRFRDFRAAGV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L++  LR LGR H+A+EA+ AI LAR  F R SFDLIYA P QT+  W+ E
Sbjct: 120 NRVSLGIQALDDADLRRLGRRHSAAEALGAIRLARAAFDRFSFDLIYARPGQTVAAWKQE 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RAL  AV HLSLYQLTIE+GT F+ +H+ G+LVLP E+   +LY  TQ++  A GL A
Sbjct: 180 LARALDEAVGHLSLYQLTIEEGTQFHTLHERGELVLPDEDTQGELYEETQALLEAAGLPA 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  G ES HNL YWRYGDY+G+GPGAH R+ +   +V     + P+ WL+ V +
Sbjct: 240 YEVSNHARPGEESRHNLTYWRYGDYVGVGPGAHGRLTLTQGKVGTRTHRAPDIWLERVER 299

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQG 366
           +G A    E +  +++  E LMMGLRLREG+ +      +GR     LD +    L+R G
Sbjct: 300 DGTAAKPFEPIGPQERLVELLMMGLRLREGVPLDRIAAESGRPAAQALDPDRLDGLRRHG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +E     RLR T  G T L+ V+  L
Sbjct: 360 LLETAD-GRLRATAEGRTRLNGVLRAL 385


>gi|114769779|ref|ZP_01447389.1| coproporphyrinogen III oxidase [alpha proteobacterium HTCC2255]
 gi|114549484|gb|EAU52366.1| coproporphyrinogen III oxidase [alpha proteobacterium HTCC2255]
          Length = 384

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/379 (46%), Positives = 266/379 (70%), Gaps = 5/379 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR+  V Q  ++ +   E++     T  R++++IFFGG
Sbjct: 9   FGIYIHWPFCAAKCPYCDFNSHVRK-SVDQSRWLSAICLELKNSAIRTRGRTVNTIFFGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP+ +A I+  IAK W ++ ++EI++EANP+SVE   F  +RKAG+NRIS+G+Q
Sbjct: 68  GTPSLMEPETVAGIIKEIAKLWVLALDIEISLEANPTSVEAQKFSDFRKAGINRISMGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL    L+ LGR H+ +EA  A  +A++ F R+SFDLIYA   Q+   WE+EL+ A S A
Sbjct: 128 SLRNDDLKALGRMHSVNEARKAFDIAKDNFKRVSFDLIYARQDQSKVDWEIELKEASSMA 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F  +++ G L  +P++++A D+Y++TQ +T  + + AYEISNH+
Sbjct: 188 VDHLSLYQLTIEDGTRFGDLYERGSLKGMPNDSLAADMYDITQEVTLQNDMPAYEISNHA 247

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HNL YWRYGDYIG+GPGAH R+    +++A +  ++PE+WL+ V  NG + ++
Sbjct: 248 IEGAESRHNLIYWRYGDYIGVGPGAHGRISENGNKIATTTIENPENWLRGVELNGTSTID 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNLQRQGFIERVQFSRL 376
            E ++   QA E+LMM LRL EG+ ++ ++ ++G  LD +  ++N++  G I +V  + L
Sbjct: 308 DEVINHIDQASEYLMMSLRLIEGVDMERYKKISGVALDNKLIDKNIE-NGLI-KVINNNL 365

Query: 377 RCTQRGMTMLDSVIANLAV 395
             TQRG  +L+++I +L +
Sbjct: 366 IATQRGRIILNTLIKDLLI 384


>gi|329113970|ref|ZP_08242737.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Acetobacter pomorum DM001]
 gi|326696717|gb|EGE48391.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Acetobacter pomorum DM001]
          Length = 384

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/383 (44%), Positives = 254/383 (66%), Gaps = 6/383 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++L +Y+HWPFC+ KCPYCDFNSHVR  ++ Q  F Q+  TE+       G R ++SIFF
Sbjct: 4   DALALYIHWPFCLAKCPYCDFNSHVRA-EIPQARFAQALRTELAHEANRLGRRRLTSIFF 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ PQ +A ++D     +  + N+EIT+EANP+SVE    + +R++G+NR+SLG
Sbjct: 63  GGGTPSLMAPQTVASLIDDATSLFDAAPNLEITLEANPTSVEAERLKDFRQSGINRVSLG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L +++L FLGR H+A++A+AA+ LAR++FPR++FDLIYA P Q++  W+ EL+ AL 
Sbjct: 123 IQALNDKALHFLGRQHSATQALAALELARSLFPRITFDLIYARPNQSVAAWKTELETALQ 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+SLYQLTIE GT F  +++ G   LP E  A +LY  T +IT AHGL+AYE+SN+
Sbjct: 183 LVADHVSLYQLTIEPGTKFEALYRQGSFSLPDEETAAELYETTTAITHAHGLNAYEVSNY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G+ES HNL YW YGDY+G+GPGAH R+ +     A    + PE W ++V + G    
Sbjct: 243 AKPGSESRHNLTYWHYGDYLGLGPGAHGRITLDGQLYATRRHRAPEPWAELVERTGSGQT 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERVQ 372
            +E L  +++A E L+MGLRL+EG+++K +E   G      LD         +G++ +  
Sbjct: 303 SQEPLVPQERAREMLLMGLRLQEGVALKHFEARTGLHLSETLDPVILAAAVEEGYLVQTP 362

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            + L  T+ G   L++++  L +
Sbjct: 363 -THLHATEEGRLRLEALLHALVL 384


>gi|259417573|ref|ZP_05741492.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter sp. TrichCH4B]
 gi|259346479|gb|EEW58293.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter sp. TrichCH4B]
          Length = 384

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/379 (48%), Positives = 249/379 (65%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  ++ ++ +E++ M +L   R ++SIF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVVS-QIDQSAWVTAYQSELRRMGELLPDRLLNSIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A +++   +NWT ++++EI++EANP SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVAAVIEAARENWTFANDIEISLEANPGSVEAGRFAGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H   EA  A  +ARN F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 125 GIQALNDDDLRRLGRIHTVDEARTAFDVARNCFDRVSFDLIYARQGQTLEAWKAELSEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP+++ A D+Y  TQ I  A+GL  YEIS
Sbjct: 185 SMAIDHLSLYQLTIEDGTAFGDRYARGKLRDLPTDDNAADMYLATQDICDAYGLPGYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HN  YWRYGDY+G+GPGAH R+ +   R A    + P +WL  V+K G  
Sbjct: 245 NHARPGAESRHNQIYWRYGDYVGVGPGAHGRITLNGQRYATEAPRAPGAWLDAVKK-GQG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           ++  E L  E Q  E +MMG+RL EG+ ++  E LAG+ L ++  + L   G I  V  +
Sbjct: 304 LLPFEILKPEDQVVEHMMMGMRLFEGLDLERHEALAGKPLSVKRIQELTDWGMIV-VDGA 362

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RLR T +G  +L++V+  L
Sbjct: 363 RLRATSQGRAVLNAVLREL 381


>gi|126738499|ref|ZP_01754204.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
 gi|126720298|gb|EBA17004.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
          Length = 384

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/381 (47%), Positives = 250/381 (65%), Gaps = 4/381 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   K+ QE + +++L E++        R ++SIF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVSA-KIDQEIWAKAYLAELERNAPALDGRVLNSIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  +++  AK W  ++++EI++EANP SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVTTVIEAAAKIWPFANDIEISLEANPGSVEAGRFAGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L ++ LR LGR H+ +EA AA  +ARN F R+SFDLIYA   Q +  W+ EL  AL
Sbjct: 125 GIQALNDEDLRRLGRIHSVAEARAAFDIARNCFDRVSFDLIYARQGQDLRHWQAELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE+GT F   +  G L  LP+++ A D+Y  TQ I  AHG+ AYE+S
Sbjct: 185 SMAIDHLSLYQLTIEEGTAFGDRYARGKLRDLPTDDTAADMYQATQDICDAHGMPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY+GIGPGAH RV +   + A    K P  WL  +RK G  
Sbjct: 245 NHAREGAESRHNLIYWRYGDYLGIGPGAHGRVTLAGRKYATETHKAPGKWLDQIRK-GSG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +E L+   Q+ E++MM +RL EG+ +  ++ L+G  L  E  ++L   G +  +   
Sbjct: 304 ESLREELTFVDQSIEYMMMSMRLSEGMDIPRYQQLSGSELPAERVQDLVNLGMVT-ISDQ 362

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+R T +G ++L++V+  L V
Sbjct: 363 RIRATAQGRSVLNAVLRELLV 383


>gi|258543385|ref|YP_003188818.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634463|dbj|BAI00439.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637521|dbj|BAI03490.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640573|dbj|BAI06535.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643630|dbj|BAI09585.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646685|dbj|BAI12633.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649738|dbj|BAI15679.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652726|dbj|BAI18660.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655782|dbj|BAI21709.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 384

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 162/338 (47%), Positives = 234/338 (69%), Gaps = 1/338 (0%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++L +Y+HWPFC+ KCPYCDFNSHVR  ++ Q  F Q+  TE+ +     G R ++SIFF
Sbjct: 4   DALALYIHWPFCLAKCPYCDFNSHVRA-EIPQARFAQALRTELAYEANRLGHRRLTSIFF 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ PQ +A ++D     +  + N+EIT+EANP+SVE    + +R+AG+NR+SLG
Sbjct: 63  GGGTPSLMAPQTVANLIDDATSLFDAAPNLEITLEANPTSVEAERLKDFRQAGINRVSLG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L +++L FLGR H+A++A+AA+ LAR++FPR++FDLIYA P Q++  W+ EL+ AL 
Sbjct: 123 IQALNDEALHFLGRQHSATQALAALELARSLFPRITFDLIYARPNQSVAAWKTELETALQ 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+SLYQLTIE GT F  +++ G   LP E  A  LY  T +IT AHGL+AYE+SN+
Sbjct: 183 LVADHVSLYQLTIEPGTKFEALYRQGSFSLPDEETAAALYETTTAITHAHGLNAYEVSNY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G+ S HNL YW YGDY+G+GPGAH R+ +     A    + PE W ++V + G    
Sbjct: 243 AKPGSASRHNLTYWHYGDYLGLGPGAHGRITLDDQLYATRRHRAPEPWAELVERTGSGQT 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            +E L  +++A E L+MGLRL+EGI++  ++   G  L
Sbjct: 303 SQEQLVPQERAREMLLMGLRLQEGIALSHFQARTGLQL 340


>gi|163745106|ref|ZP_02152466.1| coproporphyrinogen III oxidase [Oceanibulbus indolifex HEL-45]
 gi|161381924|gb|EDQ06333.1| coproporphyrinogen III oxidase [Oceanibulbus indolifex HEL-45]
          Length = 388

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 178/378 (47%), Positives = 253/378 (66%), Gaps = 4/378 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+HWPFC  KCPYCDFNSHV R ++ Q  +  ++L E+Q     T  R ++++FF
Sbjct: 12  GGFGLYIHWPFCEAKCPYCDFNSHVSR-QIDQSAWRDAYLAELQRAADETPGRILNAVFF 70

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++P  +A I+  I ++W  ++++EIT+EANP SVE   F  YR+AGV+R+S+G
Sbjct: 71  GGGTPSLMDPDVVADIIAAIRRHWPTANDLEITLEANPGSVEAGRFAAYRQAGVSRVSMG 130

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L +  L+ LGR H+A EA+ A  +ARN F R+SFDLIY    QT  QWE EL++ALS
Sbjct: 131 IQALNDADLKRLGRLHSADEAMTAFDIARNTFERVSFDLIYGRQDQTAAQWEAELKQALS 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            A+DH+SLYQLTIE+GT F   +  G L  LP E++  D++ +TQ I +  G+ AYE+SN
Sbjct: 191 LAIDHISLYQLTIEQGTAFGDRYARGKLGGLPDEDLGADMFMMTQEICNEMGMPAYEVSN 250

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRYGDYIGIGPGAH R+ +   ++A     +P+ WL  V KN  A 
Sbjct: 251 HARDGAQSRHNLIYWRYGDYIGIGPGAHGRLTLNGQKLATVAYSNPQRWLDGVAKN-EAE 309

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             +  +S  +QA EFL+MGLRL+EG+ +  +  ++G  +D     +LQ  G  ER Q  R
Sbjct: 310 KPRVAISRGEQATEFLLMGLRLKEGVDLARYAAISGHAIDENAVAHLQDIGMAER-QGDR 368

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  + +G+ +L++VI  L
Sbjct: 369 LIVSDQGVIVLNAVIETL 386


>gi|161170275|gb|ABX59245.1| coproporphyrinogen III oxidase-related FeS oxidoreductase
           [uncultured marine bacterium EB000_55B11]
          Length = 384

 Score =  366 bits (940), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 175/379 (46%), Positives = 264/379 (69%), Gaps = 5/379 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR+  V Q  ++ +   E++     T  R++++IFFGG
Sbjct: 9   FGIYIHWPFCAAKCPYCDFNSHVRK-SVDQSRWLSAXRLELKNXAIRTKGRTVNTIFFGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP+ +A I+  IAK W ++ ++EI++EANP+SVE   F  +RKAG+NRIS+G+Q
Sbjct: 68  GTPSLMEPEXVAGIIKEIAKLWVLALDIEISLEANPTSVEAQKFSDFRKAGINRISMGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL    L+ LGR H+ +EA  A  +A++ F R+SFDLIYA   Q+   WE+ L+ A S A
Sbjct: 128 SLRNDDLKALGRMHSVNEARKAFDIAKDNFERVSFDLIYARQDQSKVDWEIXLKEASSMA 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F  +++ G L  +P++++A D+Y++TQ +T  + + AYEISNH+
Sbjct: 188 VDHLSLYQLTIEDGTRFGDLYERGSLKGMPNDSLAADMYDITQEVTLQNDMPAYEISNHA 247

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HNL YWRYGDYIG+GPGAH R+    +++A +  ++PE+WL+ V  NG + ++
Sbjct: 248 IEGAESRHNLIYWRYGDYIGVGPGAHGRISENGNKIATTTIENPENWLRGVELNGTSTID 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNLQRQGFIERVQFSRL 376
            E ++   QA E+LMM LRL EG+ ++ ++ ++G  LD +  ++N++  G I+ +  + L
Sbjct: 308 DEVINHIDQASEYLMMSLRLIEGVDMERYKKISGVALDNKLIDKNIE-NGLIKVIN-NNL 365

Query: 377 RCTQRGMTMLDSVIANLAV 395
             TQ G  +L+++I +L +
Sbjct: 366 IATQXGRIILNTLIKDLLI 384


>gi|84501189|ref|ZP_00999394.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
 gi|84390480|gb|EAQ02968.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
          Length = 384

 Score =  365 bits (938), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 180/379 (47%), Positives = 247/379 (65%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV R  + Q+ ++ ++L+E+         R +SS+F
Sbjct: 7   AGGFGIYIHWPFCEAKCPYCDFNSHVSR-SIDQDRWLSAYLSELDRQAAEVPGRVVSSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  +  +LD IA+ W  +++ EIT+EANP SVE + F+ Y  AGV+R+S+
Sbjct: 66  FGGGTPSLMDPHVVGAVLDRIARLWPQANDPEITLEANPGSVESSRFRAYHSAGVSRVSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G Q++ +  LR LGR H  +EA+ A  +AR+ F R+SFDLIYA   QT   W+ EL++AL
Sbjct: 126 GFQAMNDGDLRRLGRLHTVAEALRAFDIARSCFERVSFDLIYARQDQTPEDWQKELEQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             AVDHLSLYQLTIE+GT F   ++ G L  LP E+ A  +Y +TQ++T+A G   YE+S
Sbjct: 186 ELAVDHLSLYQLTIEEGTAFGDRYRIGKLRGLPDEDAAATMYEITQAVTAAAGFEPYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HN  YWRYGDY+GIGPGAH R+ +G  R A    + P+ WLK   + G+ 
Sbjct: 246 NHARPGAESRHNSLYWRYGDYVGIGPGAHGRLTLGGKRNATEAIRMPDGWLKAA-EQGNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  LS   QA EFL+MGLRL EG+ +  +  LAGR L      +L   G IE     
Sbjct: 305 DKRRTPLSPSDQATEFLLMGLRLTEGVDMMRYTRLAGRPLSQSSVLDLSEMGMIE-TDGQ 363

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RLR + +G  +L++VIA L
Sbjct: 364 RLRVSPQGRLVLNAVIARL 382


>gi|110677822|ref|YP_680829.1| coproporphyrinogen III oxidase [Roseobacter denitrificans OCh 114]
 gi|109453938|gb|ABG30143.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Roseobacter denitrificans OCh 114]
          Length = 385

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 179/376 (47%), Positives = 246/376 (65%), Gaps = 4/376 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWP+C  KCPYCDFNSHV R ++ Q  +  ++LTE++   + T  R + S+FFGG
Sbjct: 10  FGLYIHWPYCEAKCPYCDFNSHVVR-RIDQTAWRDAYLTELRRTARETQGRVLRSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A+++  + K W V++++EIT+EANPSSVE   F  +R+ GV RIS+G+Q
Sbjct: 69  GTPSLMDPDTVAVVISEVRKLWPVANDLEITLEANPSSVEAGRFAAFRQGGVTRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR H  +EA  A  +AR+ F R+SFDLIYA   Q++  WE EL++AL  A
Sbjct: 129 ALNDDDLRRLGRIHTVTEAQTAFDIARSEFDRVSFDLIYARQGQSLHAWEQELKQALEMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE+GT F   +  G L  LP E+++ DLY LTQ +  A G+  YE+SNH+
Sbjct: 189 VDHLSLYQLTIEQGTAFGDRYNAGKLRGLPDEDLSADLYTLTQDLCGAAGMPGYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA S HNL YWRYGDY+GIGPGAH R+ V   R A     +P  WL  V  + H    
Sbjct: 249 RDGAHSRHNLIYWRYGDYLGIGPGAHGRLTVNGQRYATECYSNPAKWLAAV-GDEHTEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +  L+ + QA EFL+MGLRL+EGI    +E LAG+ LD      L   G +   +  R+ 
Sbjct: 308 RGPLTYQDQASEFLLMGLRLKEGIDTHRYETLAGKALDSHAVSELADLGMVSTTE-DRIT 366

Query: 378 CTQRGMTMLDSVIANL 393
            + +G  +L++VIA L
Sbjct: 367 VSDQGFIILNAVIARL 382


>gi|326387917|ref|ZP_08209523.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207963|gb|EGD58774.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 384

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/383 (47%), Positives = 253/383 (66%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFC+ KCPYCDFNSHVR  +V    + ++ L +M     LTG R++ SIFF
Sbjct: 2   EPLALYIHWPFCLAKCPYCDFNSHVRD-RVDVAAWQEALLADMAHEASLTGGRTLGSIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ PQ +  +L   A++W+ + N+EIT+EANPSSVE   F     AGVNR+SLG
Sbjct: 61  GGGTPSLMPPQLVETLLSAAARHWSFAPNIEITLEANPSSVEAARFAALAGAGVNRVSLG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L++++LRFLGR H+A E +AA+ +A+  F R+SFDLIYA P QT  QW+ EL RAL 
Sbjct: 121 LQALDDETLRFLGRLHDAREGLAALEVAQRHFARVSFDLIYARPGQTPEQWQAELDRALG 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLSLYQLTIE GT F  + ++G L    ++ A DL+ LT+ +T+A G+ AYEISNH
Sbjct: 181 FGTGHLSLYQLTIEPGTRFATLVREGKLEPLDDDAAADLFTLTRDMTAAAGIPAYEISNH 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHA 314
           +  G ES HNL YWRYGDY+GIGPGAH R      R+A +  +H  PE+WL  + ++GH 
Sbjct: 241 ARPGEESRHNLTYWRYGDYVGIGPGAHGR------RLAQATVRHRKPENWLAAIDRDGHG 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIER 370
           + E+  L+  +QA E L+MGLRL EGI +    K + +     +D +  R  +  G +  
Sbjct: 295 IAEQRPLALGEQASEALLMGLRLGEGIDLAALSKRFGLPQEALIDPDKARFYRDLGLVSE 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           +   RL  T RGM +LD+++  L
Sbjct: 355 IH-GRLVVTPRGMPLLDALLGEL 376


>gi|56694934|ref|YP_165279.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
 gi|56676671|gb|AAV93337.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 180/378 (47%), Positives = 253/378 (66%), Gaps = 4/378 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+YVHWPFC  KCPYCDFNSHV R ++ Q+ +++++++E++        R +++IFF
Sbjct: 8   GGFGLYVHWPFCQAKCPYCDFNSHVAR-EIDQKAWVRAYVSELERCAAELPGRVLNTIFF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ +A +++ + + W  S+++EIT+EANP SVE   F  YR  GVNRIS+G
Sbjct: 67  GGGTPSLMMPETVAAVIETVRRLWPTSNDMEITLEANPGSVEAGRFAAYRDGGVNRISMG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ+L ++ L  LGR H+ +EA AA  +AR  F R+SFDLIYA   QT   W  EL  AL+
Sbjct: 127 VQALNDRDLHRLGRIHSVAEARAAFDIARRCFERVSFDLIYARQDQTPEAWRAELNEALA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            AVDHLSLYQLTIE GT F   +  G L  LP+++ A D+Y +TQ + + HGL AYE+SN
Sbjct: 187 MAVDHLSLYQLTIEDGTAFGDRYARGKLRGLPADDDAADMYLITQEVCATHGLPAYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G+ES HNL YWRYGDY+GIGPGAH R+ V   R A     +P +WL  V K G   
Sbjct: 247 HARPGSESRHNLIYWRYGDYVGIGPGAHGRITVDGQRFATESPLNPGAWLGAVAK-GSGE 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           + +  LS + QADE+LMMGLR+ EG+ +  +E L+ + L+     +L   G IE ++ +R
Sbjct: 306 LSRVALSLQDQADEYLMMGLRIAEGLDIHRYEALSPQPLNRNRLAHLTELGMIE-IEGTR 364

Query: 376 LRCTQRGMTMLDSVIANL 393
           L+ T +G  +L++VI +L
Sbjct: 365 LKATAQGRAVLNAVILDL 382


>gi|89052695|ref|YP_508146.1| coproporphyrinogen III oxidase [Jannaschia sp. CCS1]
 gi|88862244|gb|ABD53121.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Jannaschia sp. CCS1]
          Length = 385

 Score =  364 bits (934), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 179/379 (47%), Positives = 248/379 (65%), Gaps = 3/379 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  +++++L+E+  +      R++ S+F
Sbjct: 7   AGGFGLYVHWPFCEAKCPYCDFNSHVSA-RIDQGAWLKAYLSELDRVAAELPNRTLGSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P ++A I++ + + W VS+++E+T+EANPSSVE   F GY+ AGVNR+S+
Sbjct: 66  FGGGTPSLMAPDSVASIIEAVRRLWPVSNDLEVTLEANPSSVEAGRFAGYKDAGVNRVSV 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+  EA AAI +AR  F RMSFDLIYA   Q++  W  EL +AL
Sbjct: 126 GVQALDDVDLKRLGRLHSVKEAYAAIDVARAHFERMSFDLIYARQDQSLAAWRTELTQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLSLYQLTIE GT F   H  G L  LP E+++ D+Y+LTQ +  A GL AYE+S
Sbjct: 186 NLAADHLSLYQLTIEPGTAFGTRHAKGGLRGLPEEDLSADMYDLTQDLCGAAGLPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+   A+S HNL YW  GDY GIGPGAH RV +   R        P++WL  V K+G  
Sbjct: 246 NHAADFAQSRHNLVYWHAGDYAGIGPGAHGRVTLAGRRYGTETYLQPQAWLDAVGKSGSG 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             ++  LS+ +QA+E+LMM LRL EG     +E L G+ LD    R+L   G IE     
Sbjct: 306 ESDRTALSAREQAEEYLMMSLRLTEGSDPARYEALNGQPLDPVKIRDLVDLGLIESTP-E 364

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R++ T  G  +L+ ++ +L
Sbjct: 365 RIKATACGRPVLNGILRDL 383


>gi|260431970|ref|ZP_05785941.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415798|gb|EEX09057.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 384

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 183/377 (48%), Positives = 246/377 (65%), Gaps = 6/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+YVHWPFC  KCPYCDFNSHV R  + Q+ ++ ++L+E++     T  R +++IFFGG
Sbjct: 10  FGLYVHWPFCEAKCPYCDFNSHVSR-NIDQQQWLDAYLSELKRSAAETPDRVLNTIFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A ++D     W  ++++EIT+EANP SVE   F  YR AGVNRIS+G+Q
Sbjct: 69  GTPSLMAPETVAAVIDTARSLWRPANDMEITLEANPGSVEAGRFAAYRDAGVNRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++ ++ LR LGR H  +EA AA  +AR  F R+SFDLIYA   QT+  W  EL  ALS A
Sbjct: 129 AMNDEDLRRLGRIHTVAEARAAFDIARTCFDRVSFDLIYARQYQTLEDWRAELTEALSMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ I  AHG+ AYE+SNH+
Sbjct: 189 IDHLSLYQLTIEAGTAFGDRYSVGKLRGLPEDDNAADMYLATQEICEAHGMPAYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-NGHAVV 316
             GAES HNL YWRYGDY+GIGPGAH R+ V   R+A      P +WL  V + NG  + 
Sbjct: 249 VPGAESRHNLIYWRYGDYVGIGPGAHGRITVNGQRIATETHLAPRAWLDAVAQGNGEKL- 307

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
            +  L+ ++Q+ E+LMM +RL EG+ +  +  LAGR+L       LQ  G I + Q +RL
Sbjct: 308 -RVPLAPDEQSSEYLMMCIRLAEGLDIDRFHALAGRSLPQRKLDYLQEIGMITQ-QENRL 365

Query: 377 RCTQRGMTMLDSVIANL 393
             T  G  +L++VI  L
Sbjct: 366 AATADGRAVLNAVIREL 382


>gi|58040027|ref|YP_191991.1| coproporphyrinogen III oxidase [Gluconobacter oxydans 621H]
 gi|58002441|gb|AAW61335.1| HemN [Gluconobacter oxydans 621H]
          Length = 392

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 182/390 (46%), Positives = 240/390 (61%), Gaps = 10/390 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTG--- 67
           T      L +Y+HWPFC+ KCPYCDFNSHVR   + Q+ F +    E+     +LT    
Sbjct: 3   TTSQPGPLSLYIHWPFCLAKCPYCDFNSHVREV-IPQQRFAEVLRRELAHDAARLTRDGV 61

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R + SIFFGGGTPSL+ P+ +A +++   + +    ++EIT+EANP+SVE   F  +R+
Sbjct: 62  KRPLRSIFFGGGTPSLMAPETVAALIEDAHRLFDAEDDLEITLEANPTSVEAGKFAAFRQ 121

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AGVNR+SLGVQSL + +LR LGR H+A++AI A+  AR +FPR+SFDLIYA P Q+   W
Sbjct: 122 AGVNRVSLGVQSLRDDALRKLGREHSATQAIRALETARTLFPRISFDLIYARPGQSDADW 181

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             EL  AL    DHLSLYQLTIE GT F  MH+ G+L LP E+ A  LY+LT  I + HG
Sbjct: 182 TDELTTALDLVADHLSLYQLTIEPGTKFEAMHRRGELTLPDEDTAARLYDLTGEIAARHG 241

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L  YE+SN++  GAES HNL YWRY DYIGIGPGAH R+ +     A    + PE W + 
Sbjct: 242 LLPYEVSNYARPGAESRHNLTYWRYADYIGIGPGAHGRLTLDGELYATRRHRAPEPWAER 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           + K G    E+  LS E++  E L+MGLRL EGI    +    GR L ++C      +  
Sbjct: 302 IEKTGSGSTEETLLSPEEKGREALLMGLRLSEGIDAARFAARTGRAL-MDCVDPALLEAC 360

Query: 368 IERVQFSR----LRCTQRGMTMLDSVIANL 393
           IE     R    LR T  G   L++++A L
Sbjct: 361 IEENYLERDNGILRATGEGRLRLEAILARL 390


>gi|254487813|ref|ZP_05101018.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. GAI101]
 gi|214044682|gb|EEB85320.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. GAI101]
          Length = 385

 Score =  362 bits (930), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 175/376 (46%), Positives = 251/376 (66%), Gaps = 4/376 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q+ +  ++L E++     T  R ++++FFGG
Sbjct: 10  FGLYIHWPFCEAKCPYCDFNSHVSR-TIDQQAWRDAYLLELERGAAETKGRVLNAVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P+ +A ++  I + W V++++EIT+EANP SVE   F+G+R AGVNR+S+G+Q
Sbjct: 69  GTPSLMDPEIVADVIAAIYRLWPVANDLEITLEANPGSVEAGRFKGFRDAGVNRVSMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR HN +EA+AA  +AR+ F R+SFDLIY    QT+++W+ EL++ALS A
Sbjct: 129 ALNDTDLRKLGRIHNTTEALAAFDIARSTFDRVSFDLIYGRQNQTLSEWKTELKQALSLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LP +++  D+Y  TQ I    G+ +YE+SNH+
Sbjct: 189 IDHISLYQLTIEQGTAFGDRYAVGKLRGLPDDDLGADMYAATQEICDQMGMPSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
              A+S HNL YWRYGDY+GIGPGAH R+  G  R A     +P+ WL     +G     
Sbjct: 249 RDSAQSRHNLIYWRYGDYLGIGPGAHGRLTKGGDRFATECFSNPKRWLDAA-VSGSTEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L+   QA EFLMMGLRL+EG+ +K +E LAG  L  +    +Q  G I  +   RL 
Sbjct: 308 REQLAKSDQASEFLMMGLRLKEGVDLKRYEALAGSPLSAKKIIRMQDIGMIS-ISGDRLT 366

Query: 378 CTQRGMTMLDSVIANL 393
            T +G  +L++++  L
Sbjct: 367 VTNQGFMVLNAILEEL 382


>gi|99082710|ref|YP_614864.1| coproporphyrinogen III oxidase [Ruegeria sp. TM1040]
 gi|99038990|gb|ABF65602.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Ruegeria sp. TM1040]
          Length = 384

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 181/379 (47%), Positives = 249/379 (65%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  ++ ++  E++ M +L   R ++SIF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVVS-QIDQSAWVTAYQAELRRMGELLPDRLLNSIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A +++   +NWT ++++EI++EANP SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVAAVIEAARENWTFANDIEISLEANPGSVEAGRFAGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L ++ LR LGR H+  EA  A  +ARN F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 125 GIQALNDEDLRRLGRIHSVEEARKAFDVARNCFDRVSFDLIYARQGQTLNAWKAELSEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP+++ A D+Y  TQ I   +GL  YEIS
Sbjct: 185 SMAIDHLSLYQLTIEDGTAFGDRYARGKLRDLPTDDHAADMYLATQEICELYGLPGYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY+GIGPGAH R+ +   R A    + P +WL  V + G+ 
Sbjct: 245 NHARPGAESRHNLIYWRYGDYVGIGPGAHGRITLNGTRFATEAPRAPGAWLSAVEQ-GNG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           ++  + L+SE Q +E +MMGLRL EG+ +     LA + L     + L   G ++ +  S
Sbjct: 304 LLPFDALNSEDQVNEHMMMGLRLFEGVDLDRHTALAQKPLSPSKIQELCNLGMLD-LDGS 362

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RLR T +G  +L++V+  L
Sbjct: 363 RLRATSQGRAVLNAVLREL 381


>gi|149204372|ref|ZP_01881339.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
 gi|149142257|gb|EDM30304.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
          Length = 395

 Score =  362 bits (929), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 182/377 (48%), Positives = 252/377 (66%), Gaps = 6/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R+ + Q  +  ++LTE+     L   R ++++FFGG
Sbjct: 20  FGLYLHWPFCEAKCPYCDFNSHVARH-IDQSRWCAAYLTEIDRYAALLPGRVLNTVFFGG 78

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A I++ I  +W ++++ EIT+EANP SVE   F+ + +AG++RIS+G+Q
Sbjct: 79  GTPSLMAPETVAAIIERIKHHWPMANDPEITLEANPGSVEAGRFRAFAQAGISRISMGIQ 138

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+A+EA  A  +AR  F R+SFDLIYA   QT+  W+ EL+ ALS A
Sbjct: 139 ALNDTDLKRLGRIHSAAEARQAFDIARENFERVSFDLIYARQDQTLDSWKTELRSALSMA 198

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F   +  G L  LP +++A ++Y  TQ I ++ GL AYE+SNH+
Sbjct: 199 VDHLSLYQLTIESGTAFGDRYAAGKLRGLPEDDIAAEMYETTQEICASAGLPAYEVSNHA 258

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HNL YWRYGDYIGIGPGAH R+     + A    + P  WL+ V  +G  V+E
Sbjct: 259 RAGAESRHNLIYWRYGDYIGIGPGAHGRITHNGQKYATEAHRAPGKWLESVENSG--VIE 316

Query: 318 -KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
            +E LS   QA E+L+MGLR+ +GI    +E LAG+ LD     +L   G IE    +RL
Sbjct: 317 TRERLSGPDQAVEYLLMGLRITDGIDPARFERLAGKPLDPAAVDHLVSIGMIE-THDTRL 375

Query: 377 RCTQRGMTMLDSVIANL 393
           R T+ G  +L++VI +L
Sbjct: 376 RATRSGRAVLNAVIRDL 392


>gi|254475038|ref|ZP_05088424.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruegeria sp. R11]
 gi|214029281|gb|EEB70116.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruegeria sp. R11]
          Length = 384

 Score =  362 bits (928), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 183/382 (47%), Positives = 253/382 (66%), Gaps = 6/382 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  + +++  E+ +   QL+G R +++I
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVT-ARIDQSKWAEAYRRELLRAAPQLSG-RVLNTI 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P  +A ++D   + W  S+++EI++EANP+SVE   F GYR AGVNRIS
Sbjct: 64  FFGGGTPSLMHPDTVATVIDTAREIWPFSNDIEISLEANPTSVEAGRFVGYRDAGVNRIS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQ+L +  LR LGR H+ SEA AA  +ARN F R+SFDLIYA   QT+  W+ EL  A
Sbjct: 124 MGVQALNDDDLRRLGRMHSVSEARAAFDVARNCFDRVSFDLIYARQGQTIETWKAELNDA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEI 253
           LS A+DHLSLYQLTIE GT F   ++ G L  LPS++ A D+Y  TQ I  AHGL AYE+
Sbjct: 184 LSMAIDHLSLYQLTIEAGTAFGDRYERGTLRDLPSDDNAADMYLATQEICEAHGLPAYEV 243

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+  GAES HNL YWRYGDY+G+GPGAH R+ +G  R A      P +W++ V  +G 
Sbjct: 244 SNHARPGAESRHNLIYWRYGDYLGVGPGAHGRLTLGGDRYATETYLQPGAWMEAV-TSGS 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
              ++  LS +  + EFLMMG+RL EG+ +  +  ++G++L  +   +L   G +E  + 
Sbjct: 303 GEAQRTLLSKDDASAEFLMMGMRLVEGLDMGRYRNISGKDLPADRITHLVDIGMVE-TRG 361

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RL  T  G  +L++++  L V
Sbjct: 362 DRLIATDDGRAVLNAILRELLV 383


>gi|221640721|ref|YP_002526983.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides KD131]
 gi|221161502|gb|ACM02482.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides KD131]
          Length = 385

 Score =  359 bits (921), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 182/380 (47%), Positives = 244/380 (64%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVEV  F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRTTWPLANDLEVTLEANPGSVEVGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVARATFDRVSFDLIYARQDQPLDHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F +  K G L  LP E ++ D+Y LTQ +    GL AYE+S
Sbjct: 185 AMAADHLSMYQLTVEDGTAFGERFKRGKLRGLPEEELSADMYALTQHLCERAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    K P +WL+ V ++G+ 
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPKAPGAWLERVERDGNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L  E  A E+LMM LRLREG+       LAGR LD     +L+  G IE +   
Sbjct: 305 ESPRVRLDPEDHALEYLMMSLRLREGLDRARHAALAGRPLDERRVADLREMGMIE-IDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RICATTEGRMVLNSVITALA 383


>gi|77464802|ref|YP_354306.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides 2.4.1]
 gi|77389220|gb|ABA80405.1| putative Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Rhodobacter sphaeroides 2.4.1]
          Length = 385

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 242/380 (63%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGAETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVE   F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRATWPLANDLEVTLEANPGSVEAGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVARTTFDRVSFDLIYARQDQPLEHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F    K G L  LP E ++ D+Y LTQ +  A GL AYE+S
Sbjct: 185 TMAADHLSMYQLTVEDGTAFGDRFKRGKLRGLPEEELSADMYALTQDLCEAAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    + P +WL+ V ++G  
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPRAPAAWLERVERDGTG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L +E  A E+LMM LRLREG+       LAGR LD     +L+  G I+     
Sbjct: 305 EGPRVRLDAEDHALEYLMMSLRLREGLDRGRHAALAGRPLDERRVADLREMGMID-TDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RIFATTEGRMVLNSVITALA 383


>gi|209542808|ref|YP_002275037.1| coproporphyrinogen III oxidase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530485|gb|ACI50422.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 393

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 179/390 (45%), Positives = 244/390 (62%), Gaps = 11/390 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLT--GPRSIS 72
           +  L +Y+HWPFC+ KCPYCDFNSHVR   + Q  F  +   E+ Q   +L   GPR + 
Sbjct: 5   AAPLALYIHWPFCLAKCPYCDFNSHVRDV-IPQARFAAALRRELAQDAARLNADGPRRLG 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIFFGGGTPSL++P  +A ++      +T   ++EIT+EANP+SVE    + +R AG+NR
Sbjct: 64  SIFFGGGTPSLMDPATVAALIADATTLFTPLPDLEITLEANPTSVEAGRLRAFRDAGINR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLG+QSL++ +LR LGR H+A++AI A+ LAR +F R+SFDLIYA P Q++  W  EL 
Sbjct: 124 VSLGIQSLDDDALRLLGREHSATQAIDALDLARGLFDRISFDLIYARPGQSLPAWRAELD 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RALS   DHLSLYQLTIE GT F  +H+ G L LP E+ A  LY  T  +   HGL  YE
Sbjct: 184 RALSLVSDHLSLYQLTIEPGTRFEGLHRQGLLALPDEDDAARLYEETAIVAGRHGLMGYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN++  GAES HNL YWRYGDY+GIGPGAHSR+ +     A    + PE W + V + G
Sbjct: 244 VSNYARPGAESRHNLTYWRYGDYLGIGPGAHSRLTLDGTLHATRRHRAPEPWAERVERQG 303

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGIS----VKDWEMLAGRNLDIECERNLQRQGFI 368
             V++ E LS+  +A E L+MGLRL EGI+     +   M     LD         +G++
Sbjct: 304 SGVMQDETLSARDRAREMLLMGLRLSEGITEDRFARRTGMAMADALDPAILAAALEEGYL 363

Query: 369 ERVQFSR---LRCTQRGMTMLDSVIANLAV 395
            R + +    LR T  G   L++++  L +
Sbjct: 364 LRDETTDGPVLRATPSGRLRLEALLGALVL 393


>gi|332559698|ref|ZP_08414020.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
 gi|332277410|gb|EGJ22725.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
          Length = 385

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 242/380 (63%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVE   F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRTTWPLANDLEVTLEANPGSVEAGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVARATFDRVSFDLIYARQDQPLEHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F    K G L  LP E ++ D+Y LTQ +  A GL AYE+S
Sbjct: 185 TMAADHLSMYQLTVEDGTAFGDRFKRGKLRGLPEEELSADMYTLTQDLCEAAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    + P +WL+ V ++G  
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPRAPAAWLERVERDGTG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L +E  A E+LMM LRLREG+       LAGR LD     +L+  G I+     
Sbjct: 305 EGPRVRLDAEDHALEYLMMSLRLREGLDRGRHAALAGRPLDERRIADLREMGMID-TDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RIFATTEGRMVLNSVITALA 383


>gi|83942032|ref|ZP_00954494.1| coproporphyrinogen III oxidase [Sulfitobacter sp. EE-36]
 gi|83847852|gb|EAP85727.1| coproporphyrinogen III oxidase [Sulfitobacter sp. EE-36]
          Length = 385

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 172/376 (45%), Positives = 246/376 (65%), Gaps = 4/376 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q  +  ++L E++     T  R ++++FFGG
Sbjct: 10  FGLYIHWPFCEAKCPYCDFNSHVSR-TIDQRAWRDAYLAELERGAAETQGRVLNAVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A ++  I + W  ++++EIT+EANP SVE   F  +R+AGVNRIS+G+Q
Sbjct: 69  GTPSLMDPDVVADVIAAIRRLWPTANDLEITLEANPGSVEAVRFAAFRQAGVNRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H   E +AA  +ARN F R+SFDLIY    Q +  W  EL++ALS A
Sbjct: 129 ALNDADLKRLGRIHTVDEGLAAFDIARNTFERVSFDLIYGRQNQGLADWRTELKQALSLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LPS+++  D+Y  TQ I    G+ +YE+SNH+
Sbjct: 189 IDHMSLYQLTIEQGTAFGDRYAVGKLRGLPSDDLGADMYAATQDICGEMGMPSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDY+GIGPGAH R+    +R A     +P+ WL  V  +G     
Sbjct: 249 RDGAQSRHNLIYWRYGDYLGIGPGAHGRLTQNGNRFATECFSNPKRWLDAV-ASGATEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L++E Q  EFLMMGLRL+EG+ ++ +E L+G  L  +    +Q  G I R +  +L 
Sbjct: 308 RELLTTEDQGSEFLMMGLRLKEGVDLRRYEALSGAPLSTKKITQMQDIGMISRDK-DQLY 366

Query: 378 CTQRGMTMLDSVIANL 393
            T +G  +L++++A L
Sbjct: 367 VTDQGFMVLNAILAEL 382


>gi|162148169|ref|YP_001602630.1| coproporphyrinogen III oxidase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786746|emb|CAP56329.1| putative oxygen-independent coproporphyrinogen III oxidase-like
           protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 393

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/390 (45%), Positives = 243/390 (62%), Gaps = 11/390 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLT--GPRSIS 72
           +  L +Y+HWPFC+ KCPYCDFNSHVR   + Q  F  +   E+ Q   +L   GPR + 
Sbjct: 5   AAPLALYIHWPFCLAKCPYCDFNSHVRDV-IPQARFAAALRRELAQDAARLNADGPRRLG 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIFFGGGTPSL++P  +A ++      +T   ++EIT+EANP+SVE    + +R AG+NR
Sbjct: 64  SIFFGGGTPSLMDPATVAALIADATTLFTPLPDLEITLEANPTSVEAGRLRAFRDAGINR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLG+QSL++ +LR LGR H+A++AI A+ LAR +F R+SFDLIYA P Q++  W  EL 
Sbjct: 124 VSLGIQSLDDDALRLLGREHSATQAIDALDLARGLFDRISFDLIYARPGQSLPAWRAELD 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RALS   DHLSLYQLTIE GT F  +H+ G L LP E+ A  LY  T  +   HGL  YE
Sbjct: 184 RALSLVSDHLSLYQLTIEPGTRFEGLHRQGLLALPDEDDAARLYEETAIVAGRHGLMGYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN++  GAES HNL YWRYGDY+GIGPGAHSR+ +     A    + PE W + V + G
Sbjct: 244 VSNYARPGAESRHNLTYWRYGDYLGIGPGAHSRLTLDGTLHATRRHRAPEPWAERVERQG 303

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGIS----VKDWEMLAGRNLDIECERNLQRQGFI 368
             V++ E LS+  +A E L+MGLRL EGI      +   M     LD         +G++
Sbjct: 304 SGVMQDETLSARDRAREMLLMGLRLSEGIPEDRFARRTGMAMADALDPAILAAALEEGYL 363

Query: 369 ERVQFSR---LRCTQRGMTMLDSVIANLAV 395
            R + +    LR T  G   L++++  L +
Sbjct: 364 LRDETTDGPVLRATPSGRLRLEALLGALVL 393


>gi|307294008|ref|ZP_07573852.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
 gi|306880159|gb|EFN11376.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
          Length = 396

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 178/384 (46%), Positives = 247/384 (64%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +YVHWPFCV KCPYCDFNSHVR   +  + +  + L ++     L G R +SSIF
Sbjct: 18  ADPLALYVHWPFCVSKCPYCDFNSHVR-ADIDADAWRDALLKDLAHEAGLNGGRPLSSIF 76

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +  ++D  A++W  + ++EIT+EANPSSVE   F     AGVNR+SL
Sbjct: 77  FGGGTPSLMPPRIVEALIDAAARHWRPTPDIEITLEANPSSVEAARFADLAAAGVNRVSL 136

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+LE+++L FLGR H+  E +AA+ +A+++F R++FDLIYA P Q+   WE EL R L
Sbjct: 137 GLQALEDEALHFLGRAHDVREGLAALDVAQSVFGRVNFDLIYARPGQSEADWEAELARGL 196

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+  DHLSLYQLTIE GT F  +   G L+    + A  LY  TQ++T+A G+ AYEISN
Sbjct: 197 SFGTDHLSLYQLTIEPGTRFATLAAQGKLIPADPDHAATLYERTQAMTAAAGIPAYEISN 256

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGH 313
           H+  G ES HNL YWRYGDY+G+GPGAH R      R  ++  +H  PE+W+  V +NGH
Sbjct: 257 HARPGQESRHNLTYWRYGDYLGVGPGAHGR------RGGLATMRHKKPENWMNAVARNGH 310

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE----RNLQRQGFIE 369
            +  +E LS E +A E L+MGLRL EG+ +     L+G  +D   +      L   G + 
Sbjct: 311 GLQSEEPLSPEDRAREALLMGLRLGEGVDLDRIARLSGLAVDALVDGKAVARLAGHGLV- 369

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           R Q  RL     GM +LD+++  +
Sbjct: 370 RQQDQRLYVESAGMLLLDAILPEI 393


>gi|294679005|ref|YP_003579620.1| oxygen-independent coproporphyrinogen-III oxidase [Rhodobacter
           capsulatus SB 1003]
 gi|294477825|gb|ADE87213.1| oxygen-independent coproporphyrinogen-III oxidase-3 [Rhodobacter
           capsulatus SB 1003]
          Length = 385

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 175/378 (46%), Positives = 246/378 (65%), Gaps = 3/378 (0%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+HWPFC  KCPYCDFNSHV    +  + +++++L E+  +   T  R ++++FF
Sbjct: 8   GGFGLYLHWPFCAAKCPYCDFNSHVA-AAIDHDRWLRAYLAEIDRIGAETQGRVLNTVFF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ +A ++D I   W  ++++EIT+EANP+S++   F+ + + GV R+S+G
Sbjct: 67  GGGTPSLMAPETVAAVIDRIRATWPTANDLEITLEANPTSIDAGKFRAFAQGGVTRLSMG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++++ SLR LGR H+A+E  AA  +AR  FPR+SFDLIYA   Q +  W  EL+ ALS
Sbjct: 127 MQAMDDDSLRRLGRMHSAAEGRAAFDIARAHFPRVSFDLIYARQGQGLDDWARELRGALS 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            AVDH SLYQLTIE GT F ++   G L  LP +++A D+Y  TQ I  A GL AYE+SN
Sbjct: 187 MAVDHFSLYQLTIEDGTAFGRLFAAGKLRDLPEDDLAADMYLKTQEICDAAGLPAYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAE  HNL YWRYGDY GIGPGAH R+ +G  R A    K P  WL  V + G+  
Sbjct: 247 HARPGAECRHNLVYWRYGDYAGIGPGAHGRLTLGGVRHATEAPKAPADWLDRVERLGNGE 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           + +E L  ++QA EFL+ GLRL EGI    +E L+G+ L      +L+  G I R    R
Sbjct: 307 MPREPLERQEQATEFLLFGLRLAEGIDPTRYERLSGQALPALALADLEAMGMIAR-DAGR 365

Query: 376 LRCTQRGMTMLDSVIANL 393
           +R T +G  +L++VI  L
Sbjct: 366 IRATAQGRAVLNAVIRAL 383


>gi|332187820|ref|ZP_08389554.1| radical SAM superfamily protein [Sphingomonas sp. S17]
 gi|332012170|gb|EGI54241.1| radical SAM superfamily protein [Sphingomonas sp. S17]
          Length = 387

 Score =  357 bits (915), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/374 (49%), Positives = 239/374 (63%), Gaps = 8/374 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVHWPFCV KCPYCDFNSHVR   V Q  +  + L ++     +   R ++SIFFGG
Sbjct: 12  LALYVHWPFCVSKCPYCDFNSHVRE-SVDQAAWADALLADLAHEAAMLPGRQLTSIFFGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A ILD   ++W  +  +EIT+EANPSSVE   F     AGVNR SLGVQ
Sbjct: 71  GTPSLMPPATVAAILDAAERHWGFAEGIEITLEANPSSVEAARFADLAAAGVNRASLGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++++LRFLGR H   EA+ A+  A+  F R+SFDLIYA P Q +  WE EL RA+ Y 
Sbjct: 131 ALDDEALRFLGRAHGVDEALRALQTAQEQFGRVSFDLIYARPGQPLADWEAELTRAIGYG 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F      G L +P  + A DL+  T++IT+A GL AYE SNH+ 
Sbjct: 191 TEHLSLYQLTIEPGTRFATEAAAGRLTIPDGDAAADLFETTRAITAAAGLPAYETSNHAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +GAES HNL YWRYGDY GIGPGAH R       VA +  K PE+W+  V +NGH +  +
Sbjct: 251 IGAESRHNLTYWRYGDYAGIGPGAHGR----REGVATARRKKPENWMAAVDRNGHGIELE 306

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNL-DIECERNLQRQGFIERVQFSRL 376
           E L+   +A E L+MGLRL EG+ ++    LA GR + D      L +QG + R    RL
Sbjct: 307 EALAPVARATEALVMGLRLTEGVDLRYVTALAKGREMVDAAQVERLAQQGLVRR-DGERL 365

Query: 377 RCTQRGMTMLDSVI 390
             T+ G  +LD+++
Sbjct: 366 IVTEAGALLLDAIL 379


>gi|254464716|ref|ZP_05078127.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacterales bacterium Y4I]
 gi|206685624|gb|EDZ46106.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacterales bacterium Y4I]
          Length = 384

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 177/379 (46%), Positives = 248/379 (65%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   K+ Q  +++++L+E+  + +    R +++IF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVS-AKIDQTLWVRAYLSELDRLSEHFSGRVLNTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A ++    + W  ++++EI++EANP SVE   F GYR AGVNR+S+
Sbjct: 65  FGGGTPSLMHPDTVAAVIARAREIWPFANDMEISLEANPGSVEAGRFAGYRDAGVNRVSM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L ++ LR LGR H+ +EA AA  +AR  F R+SFDLIY    QT+  W+ EL+ AL
Sbjct: 125 GIQALNDEDLRKLGRIHSVAEARAAFDIARECFDRVSFDLIYVRQGQTLEAWKAELKEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ +T+AHG+  YEIS
Sbjct: 185 SMAIDHLSLYQLTIEDGTAFGDRYARGKLRGLPEDDTAADMYLATQDLTAAHGMACYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+ +G  R A      P +WL+   K G+ 
Sbjct: 245 NHARPGAESRHNLIYWRYGDYAGIGPGAHGRLTLGGVRYATETHLAPGAWLQAA-KAGNG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L+ E  A E+LMMG+RL EG+ +  +  L+GR+L      +L   G +  +   
Sbjct: 304 ESLRVPLTREDAAAEYLMMGMRLSEGLDMVRFSQLSGRHLPESKLNDLVDLGMVT-ISEK 362

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RLR T +G  +L++V+ +L
Sbjct: 363 RLRATAQGRAVLNAVLRDL 381


>gi|159046000|ref|YP_001534794.1| coproporphyrinogen III oxidase [Dinoroseobacter shibae DFL 12]
 gi|157913760|gb|ABV95193.1| oxygen-independent coproporphyrinogen III oxidase [Dinoroseobacter
           shibae DFL 12]
          Length = 387

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 177/376 (47%), Positives = 243/376 (64%), Gaps = 3/376 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHVR  +V Q  +  +FL+E+      T  R + ++FFGG
Sbjct: 9   FGLYLHWPFCAAKCPYCDFNSHVR-ARVDQAAWENAFLSEIGRAGIETEGRRLDTVFFGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  +A I+D I + W  S+++EIT+EANP+SVE   F+ YR AGVNR+S+G+Q
Sbjct: 68  GTPSLMEPDLVASIIDRIRRTWPTSNSLEITLEANPTSVEAGRFRAYRDAGVNRVSMGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+  EA +A  +A+  F R+SFDLIYA   QT+  W  EL+ ALS A
Sbjct: 128 ALNDADLKALGRLHSVKEAQSAFEVAQAHFERVSFDLIYARQGQTLEAWIAELRAALSMA 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DHLSLYQLT+E GT F      G L  LP  ++  D++  TQ + S  G+ AYE+SNH+
Sbjct: 188 IDHLSLYQLTVEPGTAFGDRAARGMLRGLPDGDLGADMFEATQDLCSDAGMPAYEVSNHA 247

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YWRYGDY+GIGPGAH R+ +   + A S   HPE+WL  V+ +GH    
Sbjct: 248 AEGCESRHNLIYWRYGDYVGIGPGAHGRLTLSGQKWATSTPLHPEAWLAQVQDSGHGETP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           ++ L+  + ++E L+MGLRL EG+S+     +AG  L       LQ    I RV   RLR
Sbjct: 308 RQLLTPNEISEELLLMGLRLSEGVSLNRITAIAGAPLPERKLSELQEAQLI-RVDGDRLR 366

Query: 378 CTQRGMTMLDSVIANL 393
            T +G  +L++++  L
Sbjct: 367 TTLQGRMVLNAILREL 382


>gi|83953081|ref|ZP_00961803.1| coproporphyrinogen III oxidase [Sulfitobacter sp. NAS-14.1]
 gi|83842049|gb|EAP81217.1| coproporphyrinogen III oxidase [Sulfitobacter sp. NAS-14.1]
          Length = 385

 Score =  356 bits (913), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 171/376 (45%), Positives = 247/376 (65%), Gaps = 4/376 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q  +  ++L E++     T  R ++++FFGG
Sbjct: 10  FGLYIHWPFCEAKCPYCDFNSHVSR-TIDQRAWRDAYLAELERGAAETQGRVLNAVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A ++  I + W  ++++EIT+EANP SVE + F  +R+AGVNRIS+G+Q
Sbjct: 69  GTPSLMDPDVVADVIAAIRRLWPTANDLEITLEANPGSVEADRFAAFRQAGVNRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L    L+ LGR H   E +AA  +ARN F R+SFDLIY    Q++  W+ EL++ALS A
Sbjct: 129 ALNVADLKRLGRIHTVDEGLAAFDIARNTFERVSFDLIYGRQNQSLPDWKAELKQALSLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LPS+++  D+Y  TQ I    G+ +YE+SNH+
Sbjct: 189 IDHMSLYQLTIEQGTAFGDRYAVGKLRGLPSDDLGADMYAATQDICGEMGMPSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDY+GIGPGAH R+    +R A     +P+ WL     +G     
Sbjct: 249 RDGAQSRHNLIYWRYGDYLGIGPGAHGRLTQNGNRFATECFSNPKRWLDAA-ASGATEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L++E Q  EFLMMGLRL+EG+ ++ +E L+G  L  +    +Q  G I R +  +L 
Sbjct: 308 RELLTTEDQGSEFLMMGLRLKEGVDLRRYEALSGAPLSTKKITQMQDIGMISRDK-DQLY 366

Query: 378 CTQRGMTMLDSVIANL 393
            T +G  +L++++A L
Sbjct: 367 VTDQGFMVLNAILAEL 382


>gi|148260690|ref|YP_001234817.1| coproporphyrinogen III oxidase [Acidiphilium cryptum JF-5]
 gi|146402371|gb|ABQ30898.1| coproporphyrinogen III oxidase, anaerobic [Acidiphilium cryptum
           JF-5]
          Length = 382

 Score =  355 bits (912), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 175/381 (45%), Positives = 240/381 (62%), Gaps = 6/381 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFC  KCPYCDFNSHVR  ++ +   + + L E+ +     GPR ++SIFF
Sbjct: 2   TPLALYIHWPFCKAKCPYCDFNSHVRE-RIPERRIVAALLAELDFEAARLGPRRLTSIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ ++ ++    + +  + ++EIT+EANP+S+E   F+ YR+AGVNR+S+G
Sbjct: 61  GGGTPSLMAPEGVSALIARACRLFAPAPDLEITLEANPTSIEAGRFRAYREAGVNRVSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL + +LRFLGR H A+EA+AA+ L R IFPR+SFDLIYA P QT+  W  EL  AL+
Sbjct: 121 VQSLNDDALRFLGREHGAAEAMAAVELGRAIFPRLSFDLIYARPGQTLAAWRAELGAALA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +DHLSLYQLTIE GT F   H  GD  LP ++ A  LY+ T    +  GL  YEISN+
Sbjct: 181 VGLDHLSLYQLTIEPGTRFATAHARGDFALPEDDDAAALYDATAEEAARFGLGPYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YWRY DY GIG GAH R+ +G   +A    + PE W   V   GH   
Sbjct: 241 AKPGEESRHNLAYWRYRDYAGIGAGAHGRISLGGTLLATRRHRAPEEWAARVEAAGHGST 300

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
           E+  + ++++A E L+MGLRL EGI    +    GR+    LD +        G+++ V 
Sbjct: 301 EEIEIGADERAREALLMGLRLAEGIDRDAYAARTGRDLMDMLDPDVTAQAIEAGYLD-VT 359

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
            +R+  T  G   LDS++A L
Sbjct: 360 PARVSATYEGRKRLDSLLAAL 380


>gi|326403884|ref|YP_004283966.1| putative coproporphyrinogen III oxidase [Acidiphilium multivorum
           AIU301]
 gi|325050746|dbj|BAJ81084.1| putative coproporphyrinogen III oxidase [Acidiphilium multivorum
           AIU301]
          Length = 382

 Score =  355 bits (911), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 175/381 (45%), Positives = 241/381 (63%), Gaps = 6/381 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFC  KCPYCDFNSHVR  ++ +   + + L E+ +     GPR ++SIFF
Sbjct: 2   TPLALYIHWPFCKAKCPYCDFNSHVRE-RIPERRIVAALLAELDFEAARLGPRRLTSIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P++++ ++    + +  + ++EIT+EANP+S+E   F+ YR+AGVNR+S+G
Sbjct: 61  GGGTPSLMAPESVSALIARSCRLFAPAPDLEITLEANPTSIEAGRFRAYREAGVNRVSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL + +LRFLGR H A+EA+AA+ L R IFPR+SFDLIYA P QT+  W  EL  AL+
Sbjct: 121 VQSLNDDALRFLGREHGAAEAMAAVELGRAIFPRLSFDLIYARPGQTLAAWRAELGAALA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +DHLSLYQLTIE GT F   H  GD  LP ++ A  LY+ T    +  GL  YEISN+
Sbjct: 181 VGLDHLSLYQLTIEPGTRFATAHARGDFALPEDDDAAALYDATAEEAARFGLGPYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YWRY DY GIG GAH R+ +G   +A    + PE W   V   GH   
Sbjct: 241 AKPGEESRHNLAYWRYRDYAGIGAGAHGRISLGETLLATRRHRAPEEWAARVEAAGHGST 300

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
           E+  + ++++A E L+MGLRL EGI    +    GR+    LD +        G+++ V 
Sbjct: 301 EEIEIGADERAREALLMGLRLAEGIDRDAYAARTGRDLMDMLDPDVTAQAIEAGYLD-VT 359

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
            +R+  T  G   LDS++A L
Sbjct: 360 PARVSATYEGRKRLDSLLAAL 380


>gi|126463645|ref|YP_001044759.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17029]
 gi|126105309|gb|ABN77987.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 385

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 179/380 (47%), Positives = 241/380 (63%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVE   F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRTTWPLANDLEVTLEANPGSVEAGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +A   F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVAHTTFDRVSFDLIYARQDQPLEHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F    K G L  LP E ++ D+Y LTQ +  A GL AYE+S
Sbjct: 185 TMAADHLSMYQLTVEDGTAFGDRFKRGKLRGLPEEELSADMYALTQDLCEAAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    + P +WL+ V ++G  
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPRAPGAWLERVERDGTG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L +E  A E+LMM LRLREG+       LAGR LD     +L+  G I+     
Sbjct: 305 EGPRVRLDAEDHALEYLMMSLRLREGLDRGRHAALAGRPLDERRVADLREMGMID-TDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RIFATTEGRMVLNSVITALA 383


>gi|126730099|ref|ZP_01745911.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
 gi|126709479|gb|EBA08533.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
          Length = 385

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 179/378 (47%), Positives = 239/378 (63%), Gaps = 3/378 (0%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+YVHWPFC  KCPYCDFNSHV R ++ Q  +  +  +E++ +   T  R + SIFF
Sbjct: 8   GGFGLYVHWPFCEAKCPYCDFNSHVVR-EIDQTRWAAALASEVRRVAAETSGRVLGSIFF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ +A ++D     WT  +N+EIT+EANP SVE   F+GY +AGVNR+SLG
Sbjct: 67  GGGTPSLMAPETVAAVIDAARDGWTFGNNIEITLEANPRSVEAARFEGYARAGVNRVSLG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL E  LR LGR H+ +EA AA  +AR +F R+SFDLIYA   QT+  WE EL  AL 
Sbjct: 127 VQSLREPDLRKLGRLHDVTEARAAFAIARQVFDRVSFDLIYARQGQTLAGWEEELGEALD 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            AVDHLSLYQLTIE GT F+   + G L  LPS+++  D+Y LTQ + +  G+ AYE+SN
Sbjct: 187 MAVDHLSLYQLTIEPGTAFWDRSQAGKLRGLPSDDLGADMYELTQEMCARAGMPAYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+   AES HNL YWRYGD++G+GPGAH R  +   R+     + P  WL  V +     
Sbjct: 247 HAGADAESRHNLVYWRYGDWVGVGPGAHGRFDLNRQRMESVAWRMPGRWLTAVEEVKSGD 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             +  +    QA E+LMMGLRL EG+ +     ++     ++  ++LQ    +E V   R
Sbjct: 307 ELRSSVDGNDQAIEYLMMGLRLSEGLDLARLHQMSRNVATLKQIKDLQEMQLLE-VYSGR 365

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T RG  +L+SVI +L
Sbjct: 366 LVATPRGRLVLNSVIESL 383


>gi|163732968|ref|ZP_02140412.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
 gi|161393503|gb|EDQ17828.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
          Length = 385

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 176/376 (46%), Positives = 242/376 (64%), Gaps = 4/376 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWP+C  KCPYCDFNSHV R ++ Q  +  ++L E++     T  R + S+FFGG
Sbjct: 10  FGLYIHWPYCEAKCPYCDFNSHVVR-QIDQAAWRDAYLVELRRAAAETRGRVLRSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A ++  I   W V++++EIT+EANPSSVE   F  +R+ G+ RIS+G+Q
Sbjct: 69  GTPSLMDPDTVADVIREIRALWPVANDLEITLEANPSSVEAGRFAAFREGGITRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR H   EA  A  +AR+ F R+SFDLIYA   Q++  WE EL++AL  A
Sbjct: 129 ALNDDDLRRLGRIHTVKEAQTAFDIARSTFERVSFDLIYARQGQSLQAWEQELKQALDMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE+GT F   +  G L  LP E+++ DLY LTQ +  + G+  YE+SNH+
Sbjct: 189 VDHLSLYQLTIEQGTAFGDRYNAGKLRDLPDEDLSADLYTLTQDLCGSAGMPGYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDY+GIGPGAH R+     R A     +P  WL  V     A   
Sbjct: 249 RDGAQSRHNLIYWRYGDYLGIGPGAHGRLTANRQRWATECHSNPNRWLNSV-TGKDAEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +  L+S+ QA EFL+MGLRL+EGI    +E L+G+ LD     +L   G I   + +RL 
Sbjct: 308 RAALTSQDQASEFLLMGLRLKEGIDKNRYETLSGKPLDANAISDLVNLGMISDSE-NRLV 366

Query: 378 CTQRGMTMLDSVIANL 393
              +G  +L++VI+ L
Sbjct: 367 VLDQGFIVLNAVISRL 382


>gi|114326692|ref|YP_743849.1| coproporphyrinogen III oxidase [Granulibacter bethesdensis CGDNIH1]
 gi|114314866|gb|ABI60926.1| oxygen-independent coproporphyrinogen-III oxidase [Granulibacter
           bethesdensis CGDNIH1]
          Length = 394

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 160/340 (47%), Positives = 227/340 (66%), Gaps = 1/340 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+HWPFC+ KCPYCDFNSHVR  ++ Q  F  +   E+ W     G R ++S+F
Sbjct: 13  TEPLALYIHWPFCLSKCPYCDFNSHVRD-EIPQARFAAALRAELAWEASRLGRRPLASVF 71

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A +++   + +    ++EIT+EANP+SVE   F+ +R+AGVNR+SL
Sbjct: 72  FGGGTPSLMAPETVAALIEEATRYFPPCDDLEITLEANPTSVEAGRFRAFRQAGVNRVSL 131

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL +++L+ LGR H+A +A+AA+ LA  IFPR+SFDLIYA P QT+  W  EL++AL
Sbjct: 132 GIQSLHDEALKGLGRQHDAGQAMAALELAHTIFPRLSFDLIYARPGQTVAAWRQELRQAL 191

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A DHLSLYQLTIE GT +    + G+++LPS+  A +LY +T    +  G+ AYE+SN
Sbjct: 192 SLAGDHLSLYQLTIEPGTAYEASFRRGEIILPSDEQAAELYEVTGEEAAQFGMTAYEVSN 251

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  GAES HNL YWRY DY GIGPGAH RV       A    + PE W ++V + GH  
Sbjct: 252 YARSGAESRHNLAYWRYADYAGIGPGAHGRVSHSGSLFATRRHRAPEPWAELVERQGHGS 311

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +E +  +++A E L+MGLR+ +GI    +    G  L+
Sbjct: 312 TLEEEVEPQERAREMLLMGLRITDGIDEARFRQRTGLTLE 351


>gi|149912894|ref|ZP_01901428.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
 gi|149813300|gb|EDM73126.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
          Length = 385

 Score =  352 bits (904), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 178/380 (46%), Positives = 247/380 (65%), Gaps = 4/380 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+HWPFC  KCPYCDFNS V R  + Q  +++++L E+     +   R ++S+F 
Sbjct: 8   GGFGLYLHWPFCEAKCPYCDFNSQVSR-DIDQSRWLRAYLHEIDRYAGMLPGRVLNSVFL 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++P  +A IL+ + ++W  ++++E+T+EANP SVE   F+GY +AGV+R+S+G
Sbjct: 67  GGGTPSLMDPDVVAAILERVRQSWPQANDLEVTLEANPGSVEARRFRGYAEAGVSRVSMG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L ++ LR LGR H+ +EA  A  +AR  F R+SFDLIYA   QT+  W  EL  AL 
Sbjct: 127 IQALNDEDLRRLGRIHSLAEARQAHDIARKNFDRVSFDLIYARQDQTVEAWRAELGEALE 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            AVDHLSLYQLTIE+GT F   +  G L  LP+E+ A D+Y  TQ I +  G+ AYE+SN
Sbjct: 187 MAVDHLSLYQLTIEQGTAFADRYARGGLKGLPAEDAAADMYEATQEICAGAGMDAYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYGDY+GIGPGAH RV +   R A     +P+ WL  V   G + 
Sbjct: 247 HAKPGAESRHNLIYWRYGDYVGIGPGAHGRVTLDGQRHATEAWSNPDRWLSAV-DAGQSE 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E +  + QA E+LMMGLR+REGI V  +E +AG  L  E    L+  G IE     R
Sbjct: 306 KSCEAIDPKDQAAEYLMMGLRIREGIDVVRYEAMAGEALSEEKLIELRELGMIES-NGQR 364

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T++G  +L++V+ +L V
Sbjct: 365 VWVTEQGRPVLNAVLRDLLV 384


>gi|260576114|ref|ZP_05844107.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
 gi|259021594|gb|EEW24897.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
          Length = 385

 Score =  352 bits (903), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 173/378 (45%), Positives = 242/378 (64%), Gaps = 3/378 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV   ++ Q+ + +++L+E+  +   T  R ++S++FGG
Sbjct: 9   FGLYLHWPFCQSKCPYCDFNSHVS-TRIDQDRWQRAYLSEISRVGAETQGRLLNSVYFGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ ++ IL  +   WT++++ EIT+EANP SVE   F+GYR AGVNR+S+G+Q
Sbjct: 68  GTPSLMRPELVSAILARVRATWTLANDCEITLEANPGSVEAGRFRGYRDAGVNRVSMGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR H+ +EA AA  +AR  F R+SFDLIYA   QT+  W+ EL  AL+ A
Sbjct: 128 ALADGDLRALGRAHSVAEARAAFDVARTTFDRVSFDLIYARQNQTLKNWQKELSDALTMA 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            DH+SLYQLT+E GT F      G L  LP E ++ D Y  TQ I  A G+ AYE+SNH+
Sbjct: 188 ADHISLYQLTVEDGTAFGDRLAHGKLRGLPGEELSADFYAATQEICGAAGMDAYEVSNHA 247

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G+ES HNL YWR GDY+GIGPGAH R+     R A    + P +WL  V   G+    
Sbjct: 248 KTGSESRHNLIYWRAGDYVGIGPGAHGRLSQNDDRWATEGLRAPGAWLSKVESEGNGEAL 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L    +A E+LMM LRLREG+S+  +   AG  +  +   +L   G I  V  +++R
Sbjct: 308 REILRPADRAAEYLMMSLRLREGMSLPRYSSFAGDRISPQKLADLVEIGMIS-VATNQIR 366

Query: 378 CTQRGMTMLDSVIANLAV 395
            T  G  +L+++IA L+ 
Sbjct: 367 ATDAGRMVLNTLIAELSA 384


>gi|312114384|ref|YP_004011980.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219513|gb|ADP70881.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 386

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/373 (46%), Positives = 235/373 (63%), Gaps = 3/373 (0%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +HWPFC KKCPYCDFNSH  R  + +  ++ + L E++     T  + ++S+FFGGGTPS
Sbjct: 1   MHWPFCEKKCPYCDFNSHAAR-SIDEARWLAAILRELETYACETARQPVASVFFGGGTPS 59

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L++ ++   +LD IA  W +S   EIT+EANPSSVE   F GYR AGVNRISLG+QSL +
Sbjct: 60  LMQARSAGAVLDRIAALWPISETCEITLEANPSSVEAGRFAGYRAAGVNRISLGIQSLHD 119

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +L+ LGR H+A+EA AA+ +A   F RMSFDLIYA P QT+  W  EL  ALS A  HL
Sbjct: 120 DALKALGRIHDAAEARAALDIAARTFDRMSFDLIYARPGQTLDAWHAELTEALSLARGHL 179

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           SLYQLTIE  T F+ + + G L LP   +A + Y LTQ +  A GL AYE+SNH+  G E
Sbjct: 180 SLYQLTIEPETAFFALQRRGRLRLPEAELAAEFYTLTQKLCQATGLPAYEVSNHAAPGEE 239

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VAISIEKHPESWLKMVRKNGHAVVEKEFL 321
           S HNL YWRYGDY+G+GPGAH R +  + R +A +  K P +W + V   GH   E+  L
Sbjct: 240 SRHNLAYWRYGDYVGVGPGAHGRYRGAAGRKIATAALKSPLAWAEKVEALGHGREERVEL 299

Query: 322 SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQR 381
            +  +A+E ++MGLR+ EG+ V+  E   G          L+ +  IE     R+  T  
Sbjct: 300 GAHDEAEEAVLMGLRISEGLDVRRLEARTGFRPAASVVTMLESERLIEGAD-GRISTTGA 358

Query: 382 GMTMLDSVIANLA 394
           G  +L++V+  +A
Sbjct: 359 GRLVLNAVVEAVA 371


>gi|85706898|ref|ZP_01037988.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
 gi|85668509|gb|EAQ23380.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
          Length = 396

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 179/378 (47%), Positives = 243/378 (64%), Gaps = 4/378 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+YVHWPFC  KCPYCDFNSHV R ++ Q  +  ++L E+     L   R ++++FF
Sbjct: 18  GGFGLYVHWPFCEAKCPYCDFNSHVAR-EIDQTRWCTAYLAEIDRYAALVPGRVLNTVFF 76

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ IA +++ I  +W +++  EIT+EANP SVE   F+ + +AGV RIS+G
Sbjct: 77  GGGTPSLMAPETIAALIERIKASWPMANAPEITLEANPGSVEAGRFRAFAEAGVTRISMG 136

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ+L +  L+ LGR H+ +EA  A  +AR  F R+SFDLIYA   QT+  W+ EL+ AL+
Sbjct: 137 VQALNDIDLKRLGRIHSVAEARQAFDIARENFDRVSFDLIYARQDQTLEAWKAELREALA 196

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            AVDHLSLYQLTIE GT F   +  G L  LP +  A D+Y  TQ I  A GL AYE+SN
Sbjct: 197 MAVDHLSLYQLTIETGTAFGDRYAAGKLRGLPEDETAADMYEATQEICDAAGLPAYEVSN 256

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G+ES HNL YWRYGDYIGIGPGAH R+     + A    + P  WL  V +   + 
Sbjct: 257 HARPGSESRHNLIYWRYGDYIGIGPGAHGRITRNGQKHATEAHRAPGRWLDSV-ETASSE 315

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            +   LS + QA E+L+MGLR+ +GI    +E LAG+ L      +LQ+ G IE +  +R
Sbjct: 316 RKPVRLSGQDQAVEYLLMGLRISDGIDPGRFEKLAGQPLSPTVVDHLQQIGMIESLG-TR 374

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G  +L++VI +L
Sbjct: 375 LRATRAGRAVLNAVIRDL 392


>gi|241762328|ref|ZP_04760408.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241373122|gb|EER62761.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 393

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 177/381 (46%), Positives = 247/381 (64%), Gaps = 10/381 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+HWPFC+ KCPYCDFNSHVR   +    +  + L++M     LT  R +SSIFFGG
Sbjct: 19  LALYIHWPFCLAKCPYCDFNSHVRP-DIDAALWQDALLSDMAHEAALTQGRRLSSIFFGG 77

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A ++D   + W  + ++EIT+EANPSSVE + FQ    AGVNR+SLG+Q
Sbjct: 78  GTPSLMPPETVAALIDAATRYWQPTPDIEITLEANPSSVEADRFQSLALAGVNRLSLGIQ 137

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL FLGR HN  EA++A+ +A+  F R+SFDLIY  P Q++  WE EL++AL++ 
Sbjct: 138 ALDDTSLHFLGRIHNVQEALSALDIAQKNFSRVSFDLIYGRPNQSLKDWEEELKQALAFG 197

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT F+ + + G       + A DL++LT+ +T A G+ AYEISNH+ 
Sbjct: 198 SDHLSLYQLTIEEGTRFHSLVRQGQFTPMDGDKAADLFDLTRDMTKAAGIPAYEISNHAR 257

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
             +ES HNL YWRYGDYIGIG GAH R     + V I   K PE+WL  V+K    + E+
Sbjct: 258 KNSESRHNLTYWRYGDYIGIGAGAHGRRL---NNVTIR-HKKPENWLSAVQKQQQGIQEE 313

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFS 374
             LS + QA E ++MGLRL EGI  K+ +   G +    LDI   +    QG +      
Sbjct: 314 TPLSPKDQAIEAVLMGLRLTEGIDPKNIQKRTGLDISEFLDIAAIQYYSDQGLLT-FNNG 372

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T++G  + D++I  +++
Sbjct: 373 LLRITEQGALLTDALIREISL 393


>gi|87200079|ref|YP_497336.1| coproporphyrinogen III oxidase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135760|gb|ABD26502.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 384

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 179/379 (47%), Positives = 249/379 (65%), Gaps = 10/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVHWPFC+ KCPYCDFNSHVR  +     +  + L +M+   +LT  R +SSIFFGG
Sbjct: 4   LALYVHWPFCLAKCPYCDFNSHVR-ARTDIAAWQAALLADMRHEARLTPGRPLSSIFFGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  +L    + W  +  +EIT+EANPSSVE  NF     AG+NR+SLG+Q
Sbjct: 63  GTPSLMPPALVEALLAEAERLWGFAPGIEITLEANPSSVEAANFAALSSAGINRVSLGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ +L+FLGR H+ SE++AA+ LA+  F R+SFDLIYA P QT  QWE EL+RAL + 
Sbjct: 123 ALDDNTLKFLGRLHDVSESLAALDLAQTHFGRVSFDLIYARPGQTPAQWEAELKRALGFG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLYQLTIE GT F  + ++G L    ++ A DL+ LT+ +TSA  L AYE SNH+ 
Sbjct: 183 TGHLSLYQLTIEPGTRFATLVREGKLAPLDDDEAADLFALTRELTSAASLPAYETSNHAR 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YWRY DYIGIGPGAH R ++G+  V     K PE++L+ V ++G  +VE+
Sbjct: 243 PGEESRHNLTYWRYQDYIGIGPGAHGR-RLGAATVR---HKKPENFLRAVSEHGQGIVEE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQFS 374
             L+  +QA E ++MGLRL EGIS        G   D   +R    +  R G++   + +
Sbjct: 299 RQLTPSEQAIEAVLMGLRLAEGISPPALAARFGFAEDEMIDRRNRESFARMGYLNDTE-T 357

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L+ T++G  +L++++A+L
Sbjct: 358 CLKVTEQGAPVLEALLADL 376


>gi|260753400|ref|YP_003226293.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552763|gb|ACV75709.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 393

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 177/381 (46%), Positives = 249/381 (65%), Gaps = 10/381 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+HWPFC+ KCPYCDFNSHVR   +    +  + L++M     LT  R +SSIFFGG
Sbjct: 19  LALYIHWPFCLAKCPYCDFNSHVRP-DIDAALWQDALLSDMAHEAALTQGRRLSSIFFGG 77

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A ++D   + W  +S++EIT+EANPSSVE + FQ    AGVNR+SLG+Q
Sbjct: 78  GTPSLMSPETVAALIDAATRYWQPTSDIEITLEANPSSVEADRFQSLALAGVNRLSLGIQ 137

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL FLGR HN  EA++A+ +A+  F R+SFDLIY  P Q++  WE EL++AL++ 
Sbjct: 138 ALDDTSLHFLGRIHNVQEALSALDIAQKNFSRVSFDLIYGRPNQSLKDWEEELKQALAFG 197

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT F+ + + G       + A DL++LT+ +T A G+ AYEISNH+ 
Sbjct: 198 SDHLSLYQLTIEEGTRFHSLVRQGQFTPMDGDKAADLFDLTRDMTKAAGIPAYEISNHAR 257

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
             +ES HNL YWRYGDYIGIG GAH R     + V I   K PE+WL  V+K    + E+
Sbjct: 258 KNSESRHNLTYWRYGDYIGIGAGAHGRRL---NNVTIR-HKKPENWLSAVQKQQQGIQEE 313

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFS 374
             LS + QA E ++MGLRL EGI  ++ +   G +    LDI   +    QG +      
Sbjct: 314 TPLSPKDQAIEAVLMGLRLTEGIHPENIQKRTGLDISEFLDIAAIQYYSDQGLLT-FNNG 372

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T++G+ + D++I  +++
Sbjct: 373 LLRITEQGVLLTDALIREISL 393


>gi|85374027|ref|YP_458089.1| coproporphyrinogen III oxidase [Erythrobacter litoralis HTCC2594]
 gi|84787110|gb|ABC63292.1| coproporphyrinogen III oxidase [Erythrobacter litoralis HTCC2594]
          Length = 383

 Score =  349 bits (895), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 185/382 (48%), Positives = 241/382 (63%), Gaps = 20/382 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+HWPFC KKCPYCDFNSHVR   V    + ++ L +M++     G  +++SIFFGGGT
Sbjct: 5   LYIHWPFCAKKCPYCDFNSHVR-ASVDHALWERAMLADMRYEAGKAGGEALTSIFFGGGT 63

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+ P  +A +L    + W  + ++EIT+EANPSSVE  NF     AGVNR+SLGVQSL
Sbjct: 64  PSLMPPALVASLLQQAERLWGFAPDIEITLEANPSSVETANFHALAAAGVNRVSLGVQSL 123

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ +LRFLGR H   EA+ A+  A+  F R+SFDLIYALP QT + W   L+RALS+   
Sbjct: 124 DDAALRFLGRLHGVEEALTALETAQKAFQRVSFDLIYALPDQTESDWRAGLERALSFGTS 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLYQLTIE GT F    + G     +++ A DLY +TQ++T++ GL AYEISNH+  G
Sbjct: 184 HLSLYQLTIEPGTRFATDVRRGVFDPLADDPAADLYTVTQAVTASAGLPAYEISNHARPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEK 318
            ES HNL YWRY DY GIGPGAH R      R   +  +H  PE+WL  V + G    E+
Sbjct: 244 EESRHNLTYWRYHDYCGIGPGAHGR------RGGFATLRHKKPENWLAAVDECGSGAQEE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR------NLDIECERNLQRQ-GFIERV 371
             LS  +QA E L+MGLRL  G+   D E L+ R      +L    +R L  Q G IE V
Sbjct: 298 RRLSPAEQASEALVMGLRLAAGV---DLETLSARFGIGEVSLIDPDKRQLYSQLGLIEHV 354

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              RLR T +GM +LD+++  L
Sbjct: 355 N-ERLRVTAKGMPLLDALLGEL 375


>gi|310817158|ref|YP_003965122.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
 gi|308755893|gb|ADO43822.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
          Length = 390

 Score =  349 bits (895), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 178/373 (47%), Positives = 240/373 (64%), Gaps = 4/373 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC+ KCPYCDFNSHV ++ + Q  +  ++  E+  +   T  R ++S+FFGG
Sbjct: 15  FGLYIHWPFCMAKCPYCDFNSHVAQH-IDQSRWAAAYEVEIDRIAAETEGRVLNSVFFGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +  +L  +   W+++++VEIT+EANP+SVE   F GYR AGVNRIS+GVQ
Sbjct: 74  GTPSLMLPETVDRVLSRVRARWSLANDVEITLEANPTSVEAGRFHGYRDAGVNRISMGVQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL E+ L+ LGR H+ +EA AA  +AR++F R+SFDLIYA   QT   W  EL  ALS A
Sbjct: 134 SLNERDLKALGRMHSVTEARAAFDIARDVFDRVSFDLIYARQHQTPEDWRAELSEALSMA 193

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE  T F   +  G L  LP E+ A +++++TQ +    G  AYEISNH+
Sbjct: 194 VDHLSLYQLTIEPNTAFGARYDRGLLRGLPDEDNADEMWDITQEVADRLGFPAYEISNHA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HN  YWRYGDY GIGPGAH R+ +   R A      P  WL+ V K G +   
Sbjct: 254 RAGAESRHNSVYWRYGDYAGIGPGAHGRLTLNGQRYATETPLAPGRWLEDVEKTGKSETV 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +  L+   Q +EF+MMGLRL EGIS      L G  L    +R ++  G +E+V  S LR
Sbjct: 314 RAALTPTDQLEEFVMMGLRLSEGISKARLYRLGGARLQANIDRVIE-IGMLEQVGDS-LR 371

Query: 378 CTQRGMTMLDSVI 390
            T  G  +L++++
Sbjct: 372 TTTAGRPVLNAIL 384


>gi|83594968|ref|YP_428720.1| coproporphyrinogen III oxidase [Rhodospirillum rubrum ATCC 11170]
 gi|83577882|gb|ABC24433.1| coproporphyrinogen III oxidase, anaerobic [Rhodospirillum rubrum
           ATCC 11170]
          Length = 414

 Score =  348 bits (894), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 172/379 (45%), Positives = 231/379 (60%), Gaps = 9/379 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           QG    GVYVHWPFC+ KCPYCDFNSHV    + Q  + Q  L +++       PR   +
Sbjct: 19  QGDEGFGVYVHWPFCLSKCPYCDFNSHVAAAPLDQAAWRQGLLRDLETQAGALPPRQRRL 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S+FFGGGTPSL++P  +  ++D     W V+ ++EIT+EANP +VE   F  +R+AGV 
Sbjct: 79  TSVFFGGGTPSLMDPATVGAVIDKALALWPVADDLEITLEANPGTVERGRFADFRQAGVT 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQSLE+++LRFLGR H+A+ A+AA+  AR +F R SFDLIYA P QT+  WE EL
Sbjct: 139 RLSLGVQSLEDEALRFLGRRHDAAGALAALETARALFERFSFDLIYARPGQTLDAWEDEL 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            RA++    HLS+YQLTIE GT F+  H  G  VLP E++   L+ LT+   +  GL AY
Sbjct: 199 ARAVALGPSHLSVYQLTIEAGTRFFAEHARGAFVLPDEDLGAALFELTRQRLTEAGLPAY 258

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS---IEKHPESWLKMV 308
           E+SNH+  G ES HNL YWR G+Y+G+GPGAH R+   +   A       + PE WL+ V
Sbjct: 259 EVSNHARPGEESRHNLIYWRGGEYLGVGPGAHGRLTSATDEGAFQATVAHRAPEVWLRHV 318

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQR 364
            + GH +     +   Q+A+E +MMGLRL EG+  +    L G      LD         
Sbjct: 319 SQQGHGLKSTTAIDRRQRAEEMVMMGLRLEEGLVEERLLRLTGLGFAEVLDAGGLAMASE 378

Query: 365 QGFIERVQFSRLRCTQRGM 383
           +G + R     LR T  GM
Sbjct: 379 EGLLHRPAPGVLRATGAGM 397


>gi|294012807|ref|YP_003546267.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
 gi|292676137|dbj|BAI97655.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
          Length = 391

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/382 (46%), Positives = 244/382 (63%), Gaps = 16/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVHWPFCV KCPYCDFNSHVR  ++  + +  + L+++     L+G R +SSIFFGG
Sbjct: 16  LALYVHWPFCVSKCPYCDFNSHVR-AEIDNDAWRAALLSDLAHEAALSGGRPLSSIFFGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  ++D   + W  ++++EIT+EANPSSVE   F     AGVNR+SLG+Q
Sbjct: 75  GTPSLMPPDIVEALIDAATRRWRPTNDIEITLEANPSSVEAARFADLAAAGVNRVSLGLQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +LE+++L FLGR H+  E +AA+ +A++ F R++FDLIYA P Q++T WE EL R LS+ 
Sbjct: 135 ALEDEALHFLGRAHDVREGLAALDVAQSAFGRVNFDLIYARPDQSLTDWESELARGLSFG 194

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLYQLTIE GT F  +   G L     + A DLY  TQ++T+A GL AYEISNH+ 
Sbjct: 195 TGHLSLYQLTIEPGTRFATLAAQGRLKPADPDHAADLYEATQAMTAAAGLPAYEISNHAR 254

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVV 316
            G ES HNL YWRYGDY+G+GPGAH R      R  ++  +H  PE+W+  V +NGH + 
Sbjct: 255 PGQESRHNLTYWRYGDYVGVGPGAHGR------RDGLATLRHRKPENWMNAVARNGHGLQ 308

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
            +E L    +A E L+MGLRL EG+ ++    L+       +D E    L   G +   Q
Sbjct: 309 GEEPLDGRDRAREALLMGLRLAEGVELERIARLSSLPVEDLVDAEAVARLAGHGLVR--Q 366

Query: 373 FSRLRCTQ-RGMTMLDSVIANL 393
             R  C +  GM +LD+++  +
Sbjct: 367 EGRGLCVEPAGMLLLDAILPEI 388


>gi|56550908|ref|YP_161747.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56542482|gb|AAV88636.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 393

 Score =  347 bits (891), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/381 (46%), Positives = 248/381 (65%), Gaps = 10/381 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+HWPFC+ KCPYCDFNSHVR   +    +  + L++M     LT  R +SSIFFGG
Sbjct: 19  LALYIHWPFCLAKCPYCDFNSHVRP-DIDAALWQDALLSDMAHEAALTQGRRLSSIFFGG 77

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A ++D   + W  +S++EIT+EANPSSVE + FQ    AGVNR+SLG+Q
Sbjct: 78  GTPSLMSPETVAALIDAATRYWQPTSDIEITLEANPSSVEADRFQSLALAGVNRLSLGIQ 137

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL FLGR HN  EA++A+ +A+  F R+SFDLIY  P Q++  WE EL++AL++ 
Sbjct: 138 ALDDTSLHFLGRIHNVQEALSALDIAQKNFSRVSFDLIYGRPNQSLKDWEEELKQALAFG 197

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT F+ + + G       + A DL++LT+ +T A G+ AYEISNH+ 
Sbjct: 198 SDHLSLYQLTIEEGTRFHSLVRQGQFTPMDGDKAADLFDLTRDMTKAAGIPAYEISNHAR 257

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
             +ES HNL YWRYGDYIGIG GAH R     + V I   K PE+WL  V+K    + E+
Sbjct: 258 KNSESRHNLTYWRYGDYIGIGAGAHGRRL---NNVTIR-HKKPENWLSAVQKQQQGIQEE 313

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFS 374
             LS + QA E ++MGLRL EGI  ++ +   G +    LD+   +    QG +      
Sbjct: 314 TPLSPKDQAIEAVLMGLRLTEGIHSENIQKRTGLDISEFLDLAAIQYYSDQGLLT-FNNG 372

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T +G+ + D++I  +++
Sbjct: 373 LLRITAQGVLLTDALIREISL 393


>gi|144897366|emb|CAM74230.1| oxygen-independent coproporphyrinogen III oxidase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 385

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/382 (46%), Positives = 247/382 (64%), Gaps = 10/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S   GVYVHWPFC+ KCPYCDFNSH     + Q+ + ++ L E++          ++SIF
Sbjct: 7   SPGFGVYVHWPFCLSKCPYCDFNSHAAD-TIDQDRWRRALLAELEHFAARKPEAEVTSIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  IA ++D I + W     +EIT+EANPS+VE   F+ +R AG+NR+SL
Sbjct: 66  FGGGTPSLMDPATIAALIDRIHQLWPCDPLIEITLEANPSTVEAQRFRDFRAAGINRLSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +  L FLGR H+A+EA+AA+ +A   F R SFDLIYA P QTM  W+ EL +AL
Sbjct: 126 GVQALNDADLHFLGRRHDAAEALAALDVAAATFERFSFDLIYARPGQTMAAWQTELTQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    HLS YQLTIE+GT FY +H  G+  LP E++A DL+ LT+S+ +  GL AYEISN
Sbjct: 186 ALTGGHLSAYQLTIEEGTAFYPIHARGEFQLPDEDLAADLFALTRSMAAEAGLPAYEISN 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G ES HNL YWR GDY+GIGPGAH R+   +HR A    + P+ WL+ V  +GHA 
Sbjct: 246 HARPGQESRHNLTYWRGGDYVGIGPGAHGRL---NHR-ATRQHRAPDVWLRRVEAHGHAC 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIERV 371
             +E L +  +A+E +MMGLRL EGI    +    G +L    D++   +L++ G + R 
Sbjct: 302 QGEEALDARTRAEELVMMGLRLNEGIHADHFRDQCGLDLWQVIDVQAHAHLEQDGLLRRT 361

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
               +  T+ G+ +L+S+   L
Sbjct: 362 AHG-IAATEAGLLVLNSLTGAL 382


>gi|296284091|ref|ZP_06862089.1| coproporphyrinogen III oxidase [Citromicrobium bathyomarinum JL354]
          Length = 387

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 178/382 (46%), Positives = 240/382 (62%), Gaps = 10/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +Y+HWPFC+KKCPYCDFNSHVR   V  + +    L ++     LT  R + SIF
Sbjct: 4   ADDLALYIHWPFCLKKCPYCDFNSHVRD-DVDADAWQAGLLADLAHEHALTQGRRVGSIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P     +++   + W ++ + EIT+EANP+S E   F  +R AGVNR+SL
Sbjct: 63  FGGGTPSLMPPALAGSLIEQAQRLWGLAPDAEITLEANPTSYEAGKFADFRAAGVNRVSL 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL E++L FLGR H+A+EA+AA+  A+ +F R++FDLIYA P Q+   WE EL RAL
Sbjct: 123 GVQSLHEEALAFLGREHSAAEAMAAVESAQGLFGRVTFDLIYARPGQSAEAWEAELARAL 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++  +HLSLYQLTIE GT F      G L     + A DL+  TQ    A GL AYEISN
Sbjct: 183 AFGTEHLSLYQLTIEPGTGFAGAVARGRLTPMDPDEAADLFVQTQEQMRAAGLPAYEISN 242

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRY DY+GIGPGAH R       +A    K PE++L+ V +NGH +
Sbjct: 243 HARPGAQSHHNLTYWRYRDYVGIGPGAHGR----RGGMATIRHKKPEAFLRRVGENGHGI 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNL--QRQGFIERV 371
            E+  L  E+Q  E L+MGLRL EG+ +       G   D  ++ +R       GF+E +
Sbjct: 299 SEERALGREEQLSEALLMGLRLAEGLDLAALATRFGTTPDALVDADRAAFYADLGFVE-L 357

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              RL  T +GM +LD+++A L
Sbjct: 358 DGDRLTITPQGMPLLDALLAEL 379


>gi|148553493|ref|YP_001261075.1| coproporphyrinogen III oxidase [Sphingomonas wittichii RW1]
 gi|148498683|gb|ABQ66937.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingomonas wittichii RW1]
          Length = 397

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 176/381 (46%), Positives = 237/381 (62%), Gaps = 10/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFCV KCPYCDFNSHVR   V Q+ +  + L ++         R + SIFF
Sbjct: 20  GGLALYIHWPFCVSKCPYCDFNSHVRE-SVDQQAWRDALLRDLAHEAAALPGRRLGSIFF 78

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P  +A ++D   ++W  + ++EIT+EANPSSVE   F    +AG+NR+SLG
Sbjct: 79  GGGTPSLMPPATVAALIDAATRHWPAADDIEITLEANPSSVEAARFADLARAGINRVSLG 138

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L++  L +LGR H  +E +AA+  A+  F R+SFDLIYA P QT   W  EL RALS
Sbjct: 139 LQALDDAVLGWLGRAHGVTEGLAALDTAQTSFGRVSFDLIYARPGQTPEAWAAELGRALS 198

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +HLSLYQLTIE GT F      G+ V    +   +L+  T++ T+A GL AYEISNH
Sbjct: 199 FGTEHLSLYQLTIEPGTQFATRVAKGEFVPLDPDAGAELFEQTRAATAAAGLPAYEISNH 258

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  GAES HNL YWRYG+Y GIGPGAH R + G   V     K PE+WL  V  NGH + 
Sbjct: 259 ARPGAESRHNLTYWRYGNYAGIGPGAHGR-RDGRATVR---RKKPENWLARVEANGHGIE 314

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA----GRNLDIECERNLQRQGFIERVQ 372
            ++ L SE +A E L+MGLRL EG+ +     ++    GR +D      L RQG + R  
Sbjct: 315 REDDLPSEARAQEALLMGLRLAEGVDLARIAAMSGLPVGRLVDAIAIDRLARQGLLAR-D 373

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             RL  +  GM +LD+++A +
Sbjct: 374 GDRLTVSDAGMLLLDAILAEI 394


>gi|255261580|ref|ZP_05340922.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thalassiobium sp. R2A62]
 gi|255103915|gb|EET46589.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thalassiobium sp. R2A62]
          Length = 386

 Score =  345 bits (884), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 176/376 (46%), Positives = 237/376 (63%), Gaps = 5/376 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNS V + ++ Q  +  +++ E++    LT  R ++S+FFGG
Sbjct: 10  FGLYIHWPFCQAKCPYCDFNSFVSK-EIDQTKWRDAYIVELRRTAALTPNRVLNSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++PQ +  IL  + KNWT+++++EIT+EANP+SVE   F  +R AG+NR+S+G+Q
Sbjct: 69  GTPSLMDPQIVDDILQEVQKNWTIANDIEITLEANPTSVEAGRFADFRAAGINRVSMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL +Q LR LGR H+ SE IAA   ARN F R+SFDLIYA   QT+  W  EL +AL  A
Sbjct: 129 SLNDQDLRKLGRTHSVSEGIAAFETARNEFERVSFDLIYARQGQTLQDWNAELGQALEMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F      G L  LP+++ A D+Y  TQ +TS HG+ +YE+SNH+
Sbjct: 189 VDHLSLYQLTIEDGTAFGDRFAAGKLRDLPNDDNAADMYFATQELTSKHGMKSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +G+ES HNL YW  GDYIGIGPGAH R+     R A   E  P +WL  V KNG     
Sbjct: 249 KVGSESRHNLIYWNGGDYIGIGPGAHGRLTNNGIRYATETELSPVAWLSKVAKNGSGQTI 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           ++ ++ + +  E   MGLRL  G+   D   L   N     E +   +  I  V    L 
Sbjct: 309 QDAMTRQDELTERFTMGLRLATGV---DLGRLGLENHQKSFENSWLAEDQIIEVAQESLI 365

Query: 378 CTQRGMTMLDSVIANL 393
            T +G  +L++VI  L
Sbjct: 366 VTAKGRPVLNAVIVEL 381


>gi|94496908|ref|ZP_01303482.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingomonas sp. SKA58]
 gi|94423584|gb|EAT08611.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingomonas sp. SKA58]
          Length = 393

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 178/383 (46%), Positives = 239/383 (62%), Gaps = 12/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+HWPFCV KCPYCDFNSHVR   +  + +  + L +M     LTG R ++SIF
Sbjct: 15  TEPLALYIHWPFCVSKCPYCDFNSHVRE-GIDVDAWRGALLADMAHEAALTGGRPLTSIF 73

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A ++    + W ++ + EIT+EANP+SVE   F     AGVNR+SL
Sbjct: 74  FGGGTPSLMPPALVADLIAAADRQWGLAPDSEITLEANPNSVEAARFADLAAAGVNRVSL 133

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L+  +L FLGR H+  E +AA+  A+ +F R+SFDLIYA P Q+   WE EL RAL
Sbjct: 134 GLQALDNDALHFLGRAHDVDEGLAALATAQRVFDRVSFDLIYARPGQSEADWEAELARAL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +   HLSLYQLTIE GT F  +   G L     +    LY LTQS+T A G+ AYEISN
Sbjct: 194 GFGTGHLSLYQLTIEPGTRFATLVAQGKLTPADPDHGATLYELTQSMTVAAGIPAYEISN 253

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G ES HNL YWRYGDY GIGPGAH R + G   V     K PE+W+  V +NGH  
Sbjct: 254 HARPGQESRHNLTYWRYGDYAGIGPGAHGR-RTGQATVR---HKKPENWMNAVARNGHGA 309

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DIECERNLQRQGFIER 370
             +E L+ E +A E L+MGLRLREG+ ++     +G  +     D+   R L   G ++R
Sbjct: 310 QGEEPLADEDRAREALLMGLRLREGVDLRRIASESGITISQLVDDLAVAR-LMEIGLMDR 368

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
            Q S ++ T  GM +LD+++  +
Sbjct: 369 -QESHIQVTPAGMLLLDAILPEI 390


>gi|254461596|ref|ZP_05075012.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacterales bacterium HTCC2083]
 gi|206678185|gb|EDZ42672.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 384

 Score =  343 bits (880), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 174/379 (45%), Positives = 241/379 (63%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV R ++ +  ++ ++L E+         R ++++F
Sbjct: 7   NGGFGIYVHWPFCEAKCPYCDFNSHVSR-EIDEARWLNAYLCELDRAAVELSGRVVNAVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I++ I K+W V ++ EIT+EANP SVE   F+GY   GV RIS+
Sbjct: 66  FGGGTPSLMHPDTVAAIIERIRKHWPVPNDPEITLEANPGSVEAGRFRGYADGGVTRISM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ L+ LGR H   EA  A ++AR+ F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 126 GVQALNDRDLKRLGRIHTVDEAKKAFNIARSTFERVSFDLIYARQDQTLENWKKELNEAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A+DHLSLYQLTIEKGT F   ++ G L  LP E++A D+Y+ T  +    GL  YE+S
Sbjct: 186 CLAIDHLSLYQLTIEKGTAFSARYEKGGLTGLPVEDLAADMYDATNELCERAGLFGYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  GAES HN+ YWRYGDY+GIGPGAH R+ V   + A    + P +WL+   + G  
Sbjct: 246 NYAKPGAESRHNMIYWRYGDYLGIGPGAHGRLTVDGTKYATEHFRMPSAWLENSER-GKG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              ++ LS+  QA+E+L+MGLR+ EGI     E LAG  +D     +L     I +   +
Sbjct: 305 EKIRDGLSNTDQANEYLIMGLRITEGIDRARLENLAGVPVDQSSLDHLNDLNLITQ-DGA 363

Query: 375 RLRCTQRGMTMLDSVIANL 393
            LR T +G  +L+SVI  L
Sbjct: 364 NLRTTPQGRLLLNSVIGEL 382


>gi|296114823|ref|ZP_06833472.1| coproporphyrinogen III oxidase [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978637|gb|EFG85366.1| coproporphyrinogen III oxidase [Gluconacetobacter hansenii ATCC
           23769]
          Length = 407

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 173/391 (44%), Positives = 234/391 (59%), Gaps = 11/391 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---- 70
           G  +L +YVHWPFC+ KCPYCDFNSHVR   + Q  F  +   E+       G       
Sbjct: 18  GGEALALYVHWPFCLSKCPYCDFNSHVRDV-IPQARFGNALRRELAHEAARIGTARDTRP 76

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + SIFFGGGTPSL+EP  +A ++      + +S ++EIT+EANP+SVE    + +R  G
Sbjct: 77  VLGSIFFGGGTPSLMEPATVAALIGDAGHLFRLSPDIEITLEANPTSVETARLRAFRDGG 136

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNRIS+G+QSL+ ++LRFLGR H   +AIAA+  AR +F R+SFDLIYA P+Q++  W  
Sbjct: 137 VNRISVGLQSLDPEALRFLGREHTVPQAIAALEQARALFGRISFDLIYARPEQSLASWRG 196

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL  AL  A DHLSLYQLTIE GT F  +++     LP +++A  LY  T  + + HGL 
Sbjct: 197 ELDAALDLASDHLSLYQLTIEPGTRFESLYRQNRFHLPDDDLAARLYEETARVAARHGLL 256

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN++  GAES HNL YWRYGDY+GIGPGAH RV       A    + PE W + V 
Sbjct: 257 GYEVSNYARPGAESRHNLTYWRYGDYLGIGPGAHGRVTRDGVTYATRRHRAPEPWAERVE 316

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           + G     ++ LS  ++A E L+MGLRL EGI+   +    G +L    +  + +    E
Sbjct: 317 RTGTGTTHEDALSPREKAREMLLMGLRLDEGIAAGRFARRTGMSLGDATDPGILQAALEE 376

Query: 370 -----RVQFSRLRCTQRGMTMLDSVIANLAV 395
                    +RLR T  G   L+S++A L V
Sbjct: 377 DYLRWDAGGARLRATAEGRLRLESLLAALVV 407


>gi|163797075|ref|ZP_02191030.1| putative oxygen-independent coproporphyrinogen III oxidase [alpha
           proteobacterium BAL199]
 gi|159177591|gb|EDP62144.1| putative oxygen-independent coproporphyrinogen III oxidase [alpha
           proteobacterium BAL199]
          Length = 400

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 174/388 (44%), Positives = 238/388 (61%), Gaps = 6/388 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            +T      +GVYVHWPFC  KCPYCDFNSHV    V  + +  + + E++      G R
Sbjct: 7   ELTTTLDEPMGVYVHWPFCRSKCPYCDFNSHVSD-TVDHDRWRTALVRELETQAARVGRR 65

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+FFGGGTPSL+EP+ +A +LD +  ++ +++++E+T+EANP+SVE     G+R AG
Sbjct: 66  RVESVFFGGGTPSLMEPETVAAVLDTVRSSFRIANDLEVTLEANPTSVEAGRLDGFRDAG 125

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+SLGVQ+L+++ LRFLGR H ASEA+AA+  AR  F R+SFDLIYA P Q+   W+ 
Sbjct: 126 VNRVSLGVQALDDEVLRFLGRTHAASEALAAVAAARERFDRVSFDLIYARPGQSPQSWKR 185

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL  AL +A  HLSLYQLTIE  T F+ +H  G   LP E+ A  L+++TQ    A GL 
Sbjct: 186 ELSEALKHAAGHLSLYQLTIEPTTPFHSLHARGAFRLPDEDTAATLWDVTQETLDAAGLS 245

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           AYE+SNH+  G E  HN+ YW Y DY+G+GPGAH R+     + A    + P  WL  V 
Sbjct: 246 AYEVSNHARPGDECRHNVVYWTYRDYLGVGPGAHGRLSEAGGKTATRTHRAPSIWLDRVE 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQ 365
           ++GHA+V+ + L  ++   E  + GLRL  G+S + W  L  R      DI     L   
Sbjct: 306 RDGHALVDDQMLDPDEVLVEATLTGLRLASGLSRERWHALFDRPPEDLFDIRTIGLLTDG 365

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           GF+E  +   LR T  G   LD+V   L
Sbjct: 366 GFLELDEVG-LRATATGRARLDAVTDRL 392


>gi|114762201|ref|ZP_01441669.1| coproporphyrinogen III oxidase [Pelagibaca bermudensis HTCC2601]
 gi|114545225|gb|EAU48228.1| coproporphyrinogen III oxidase [Roseovarius sp. HTCC2601]
          Length = 383

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 175/379 (46%), Positives = 238/379 (62%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+YVHWPFC  KCPYCDFNSHV  + V Q  +  + ++E+    + T  R + SI+
Sbjct: 7   DGGFGLYVHWPFCEAKCPYCDFNSHVVSH-VDQTRWAAALVSELARYGRQTEGRVLRSIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +  +LD    +W  ++++EIT+EANP SVE+N F+G+  AGVNR+SL
Sbjct: 66  FGGGTPSLMAPETVRAVLDASRDHWAWANDIEITLEANPRSVEINKFEGFAMAGVNRVSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L    LR LGR H+  +A+ A+ +A++ F R++FDLIY    Q+++ WE+EL+ AL
Sbjct: 126 GVQALRPDDLRRLGRLHDVDDAVRALEIAKSTFNRVNFDLIYGRQGQSLSDWEVELREAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A DHLSLYQLTIE+GT F+   + G L  LPSE++  DLY  TQ I  A G  AYE+S
Sbjct: 186 DLAADHLSLYQLTIEEGTAFWDRAQAGKLRDLPSEDLGADLYLATQEICEAAGKPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NHS  G ES HNL YWR GDY+GIGPGAH RV V   R A    + P  W+K   + G A
Sbjct: 246 NHSGEGDESRHNLVYWRGGDYVGIGPGAHGRVTVNGQRSATVARRAPGDWIKAA-EAGSA 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             E E L  +    E+LMMGLRL EG+ ++   M+  +         L   G I R + +
Sbjct: 305 DQEVESLMLQDVWAEYLMMGLRLSEGLDLERARMIDPKRTAALSLDPLVELGLIWRNE-A 363

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R   TQ+G  +L+++ A L
Sbjct: 364 RFGATQQGRMLLNTLTAEL 382


>gi|126724521|ref|ZP_01740364.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2150]
 gi|126705685|gb|EBA04775.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2150]
          Length = 384

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 180/382 (47%), Positives = 242/382 (63%), Gaps = 17/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFF 76
            GVYVHWPFC  KCPYCDFNSHV    V Q+ +  +FL+E++  R + G   R +SSI+F
Sbjct: 10  FGVYVHWPFCQSKCPYCDFNSHVSA-NVDQKRWFSAFLSEIE--RTVVGLEGRQLSSIYF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+EP  +  ILD +   + +++++EIT+EANP+SVE   FQ Y  AGVNR+S+G
Sbjct: 67  GGGTPSLMEPWLVEGILDALKSKFLIANDIEITLEANPTSVEAGRFQAYHDAGVNRVSMG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L    L+ LGR H+ +E   A   AR+IF R+SFDLIYA   QT+ QW  EL++AL+
Sbjct: 127 IQALNVPDLKRLGRLHSVNEGQDAFDTARHIFDRVSFDLIYARQDQTLDQWRSELKQALA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +VDHLSLYQLTIE GT F      G L  LPSE++  D+Y LTQ +  A G+ AYE SN
Sbjct: 187 MSVDHLSLYQLTIEPGTAFGDRFSKGGLAGLPSEDLGADMYELTQELCEAAGMPAYETSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+ +G+ES HNL YW  GDY+G+GPGAH R+    HR+A      P  WL  V  +G   
Sbjct: 247 HAAVGSESRHNLVYWNSGDYLGLGPGAHGRITQYGHRIATETHLAPGKWLDAVENSGSG- 305

Query: 316 VEKEFLSSEQQA----DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              E LS +Q      +E LMMGLRLR GI    +E +   N  +E  + L+  G +E  
Sbjct: 306 ---ESLSRKQDGFEAQEEALMMGLRLRSGIDEVRFEQVL--NTKVEKIQGLKEIGMLETA 360

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
               LR T++G  +L++++  L
Sbjct: 361 N-GFLRTTEQGRPVLNAILREL 381


>gi|330993132|ref|ZP_08317070.1| Radical S-adenosyl methionine domain-containing protein 1
           [Gluconacetobacter sp. SXCC-1]
 gi|329759902|gb|EGG76408.1| Radical S-adenosyl methionine domain-containing protein 1
           [Gluconacetobacter sp. SXCC-1]
          Length = 396

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 175/391 (44%), Positives = 232/391 (59%), Gaps = 13/391 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PR 69
           +  L +YVHWPFC+ KCPYCDFNSHVR   + +  F  +   E+ +     G      PR
Sbjct: 8   AEPLALYVHWPFCLSKCPYCDFNSHVRDV-IPRARFGAALRRELAFEAARMGDSPAERPR 66

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I SIFFGGGTPSL+ P+ +A ++      + ++   EIT+EANP+SVE    + +R AG
Sbjct: 67  -IGSIFFGGGTPSLMAPETVAGLIADARTLFGLTDTAEITLEANPTSVETGLLRAFRDAG 125

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNRIS+GVQSL+ ++LRFLGR H+A +AIAA+  AR +F R+SFDLIYA P Q    W  
Sbjct: 126 VNRISVGVQSLDAEALRFLGREHDAGQAIAALETARGLFDRISFDLIYARPGQDARAWRA 185

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL+ AL+   DHLSLYQLTIE GT F  +++ G   LP  + A  LY LT  + + HGL 
Sbjct: 186 ELEAALALVSDHLSLYQLTIEPGTRFEGLYRQGRFRLPDGDDAAQLYELTAEVAARHGLL 245

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  GAES HNL YWRYGDY+GIGPGAH R+       A    + PE W + V 
Sbjct: 246 GYEISNYARPGAESRHNLTYWRYGDYMGIGPGAHGRLTCNGVTSATRRHRAPEPWAERVE 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQ 365
           + G      E L +  +A E L+MGLRL EGI+   +    G  +    D    R    +
Sbjct: 306 RTGTGAHPDEPLDNRDRAREMLLMGLRLAEGIATPRFARRTGMTITEATDPATMRAAVEE 365

Query: 366 GF-IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G+ +       LR T  G   L+S++A L +
Sbjct: 366 GYLVHDTTRQTLRATAEGRLRLESLLAALVL 396


>gi|119382770|ref|YP_913826.1| coproporphyrinogen III oxidase [Paracoccus denitrificans PD1222]
 gi|119372537|gb|ABL68130.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Paracoccus denitrificans PD1222]
          Length = 394

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 170/380 (44%), Positives = 235/380 (61%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV    + Q  ++ ++  E+  + + T  R ++SIF
Sbjct: 17  AGGFGLYVHWPFCAAKCPYCDFNSHVA-AAIEQGRWLAAYRAEIARLGRETPGRVLNSIF 75

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A +++     W  ++++EIT+EANP+SVE   F+ Y  AGVNR+S+
Sbjct: 76  FGGGTPSLMAPETVAGVIEAARAAWPFANDIEITLEANPTSVETGRFRAYADAGVNRVSM 135

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +  LR LGR H+A EA AA  +AR+ F R+SFDLIYA   Q    W  EL  AL
Sbjct: 136 GVQALNDDDLRRLGRMHSAGEARAAFDIARDCFTRVSFDLIYARQDQDRAHWRRELGEAL 195

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             AVDHLS YQLTIE GT F   H  G L  LP ++++ D+Y  TQ I +A G+  YEIS
Sbjct: 196 GMAVDHLSAYQLTIEPGTAFGARHAKGGLKGLPDDDLSADMYLDTQEICAAAGMPTYEIS 255

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GD+  +GPGAH R+ + S R A      P +WL+ V   G+ 
Sbjct: 256 NHARPGAESRHNLIYWRQGDWAAVGPGAHGRLTLPSGRWATEAHLAPGAWLEAVEARGNG 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             ++E L    +A E+L+M +RL EG+ V  + +  G  L  +   NL   G I  ++  
Sbjct: 316 DSQREMLGLSDRALEYLLMSMRLVEGLDVPRY-LAHGAELPQDRLMNLAELGLIS-LRGD 373

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T  G  +L++++  LA
Sbjct: 374 RLAATAAGRPVLNAILRELA 393


>gi|126734413|ref|ZP_01750160.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. CCS2]
 gi|126717279|gb|EBA14143.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. CCS2]
          Length = 385

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 173/380 (45%), Positives = 242/380 (63%), Gaps = 12/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV   ++ Q+ +  ++L+E++ + + T  R + S+FFGG
Sbjct: 10  FGLYIHWPFCQAKCPYCDFNSHVVA-QIDQKAWQAAYLSEIERIGEETKGRVLRSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +  IL  +   W +++++EIT+EANP+SVE   F GYR AGVNR+S+G+Q
Sbjct: 69  GTPSLMDPAVVDAILTKVRATWPLANDIEITLEANPTSVEAGRFAGYRDAGVNRVSMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H A EA+ A  +ARN F R+SFDLIYA   Q++  W  EL +AL+ A
Sbjct: 129 ALNDADLKALGRLHTAREAMQAFDVARNAFDRVSFDLIYARQGQSLKDWTSELGQALNLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ +    GL +YE+SNH+
Sbjct: 189 VDHLSLYQLTIEDGTAFGDRYAAGKLRDLPDDDAAADMYMATQEVCGEAGLFSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES+HN  YW+YGDY GIGPGAH R+ +G  R A      P  WL  V K G+    
Sbjct: 249 RPECESVHNKIYWKYGDYAGIGPGAHGRLTLGGTRYATEASLAPTIWLSQVLKTGNGDGN 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWE----MLAGRNLDIECERNLQRQGFIERVQF 373
            E L  + Q  EFL+MG+RLREG+ +  +      +   N++     NLQ  GF+++ Q 
Sbjct: 309 LEALDRQDQFVEFLLMGMRLREGVQLSRFSDCVTYIFQNNIN-----NLQESGFVQK-QD 362

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T +G  +L++V+  L
Sbjct: 363 DVLRVTDQGYPVLNAVLREL 382


>gi|83313599|ref|YP_423863.1| coproporphyrinogen III oxidase [Magnetospirillum magneticum AMB-1]
 gi|82948440|dbj|BAE53304.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Magnetospirillum magneticum AMB-1]
          Length = 375

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 168/377 (44%), Positives = 231/377 (61%), Gaps = 11/377 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC+ KCPYCDFNSH     +    +  + L E+      T  R  +S+FFGG
Sbjct: 6   FGIYIHWPFCLSKCPYCDFNSHAS-LAMDHGRWRAALLAELDHFAAQTSDRIPTSVFFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP+    ++D +   W  + ++E+T+EANP+SVE + F+ +R+AG+NR+SLG+Q
Sbjct: 65  GTPSLMEPETAGALVDAVKSRWAAAPDLEVTLEANPTSVEADRFRAFREAGINRLSLGIQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L+ ++L FLGR H+  EA+AA+ LA+  FPRMSFDLIY+ P QT  QW  EL RAL  A
Sbjct: 125 ALDSKALAFLGRRHSVDEALAALRLAQATFPRMSFDLIYSRPGQTEAQWRTELARALDLA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F   H  G+  LP E+ A   +  TQ +    GL AYEISNH+ 
Sbjct: 185 GEHLSLYQLTIEDGTAFAPAHGRGEFALPDEDEATAQFETTQEMCEKAGLPAYEISNHAR 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAE  HNL YW+ G+++GIGPGAH R        A++  + P +WL  V  NGHA   +
Sbjct: 245 PGAECRHNLTYWQGGEWLGIGPGAHGRFD----GFALAQARSPGTWLAQVDANGHATETR 300

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFSRL 376
             L   ++  E ++MGLRLR G+      +LA     LD E    +   GF+       L
Sbjct: 301 YALDPAERRSELVLMGLRLRNGLGPA---LLAEVRPALDPEALARMIEGGFLVEDTLG-L 356

Query: 377 RCTQRGMTMLDSVIANL 393
           R T RG  +L++V+  L
Sbjct: 357 RTTDRGRLVLNAVLGEL 373


>gi|84514913|ref|ZP_01002276.1| coproporphyrinogen III oxidase [Loktanella vestfoldensis SKA53]
 gi|84511072|gb|EAQ07526.1| coproporphyrinogen III oxidase [Loktanella vestfoldensis SKA53]
          Length = 382

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 175/379 (46%), Positives = 240/379 (63%), Gaps = 15/379 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+HWPFC  KCPYCDFNSHV   ++  + +  ++L+E+  +   T  R + S+FF
Sbjct: 8   GGFGLYIHWPFCQAKCPYCDFNSHVVT-QIDHKAWESAYLSEISRLGAETEGRILRSVFF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS+++P  +  +L  +   W +++++EIT+EANP+SVE   F GYR AGVNR+S+G
Sbjct: 67  GGGTPSMMDPAVVDAVLTRVRATWPMANDIEITLEANPTSVEAERFAGYRAAGVNRVSMG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L +  L+ LGR H   EA+ A  +AR +F R+SFDLIYA   QT+  WE EL  ALS
Sbjct: 127 IQALNDPDLKALGRLHGRDEALRAFEIARGVFDRVSFDLIYARQGQTLAAWEAELAEALS 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            AVDHLSLYQLTIE GT F   +  G L  LP ++ A D+Y LTQ + +AHG   YE+SN
Sbjct: 187 LAVDHLSLYQLTIEDGTAFGDRYAAGKLRGLPDDDAAADMYALTQEVCTAHGFAGYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G ES+HN  YWRYGDY GIGPGAH R+ +G HR A   E  P +WL  VRK G+  
Sbjct: 247 HARAGCESIHNQIYWRYGDYAGIGPGAHGRLTLGGHRHATEAELSPLAWLSQVRKIGNGD 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERV 371
           + +  L    QA E L+MG+RL EG+ ++         LDI    +    L   G +E +
Sbjct: 307 LTRSMLDDAAQATERLLMGMRLTEGVMLE--------RLDIAALSSKISYLSDIGMVE-I 357

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  RLR T  G  +L++V+
Sbjct: 358 EQGRLRATAAGRPVLNAVL 376


>gi|189184081|ref|YP_001937866.1| coproporphyrinogen III oxidase [Orientia tsutsugamushi str. Ikeda]
 gi|189180852|dbj|BAG40632.1| oxygen-independent coproporphyrinogen III oxidase [Orientia
           tsutsugamushi str. Ikeda]
          Length = 400

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/391 (43%), Positives = 244/391 (62%), Gaps = 15/391 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S+ VY+HWPFC+ KCPYCDFNSHV   KV   ++  +F   +++   L   + I SIFFG
Sbjct: 11  SISVYIHWPFCLSKCPYCDFNSHVAT-KVNFNDWQLAFRKSIKYFEPLLTGKIIKSIFFG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P+ +A IL+ ++     S  VEIT+EANP+SVE   FQ +R AG+NR+S+GV
Sbjct: 70  GGTPSLMDPELVASILNLLSSLAKFSDTVEITLEANPTSVEAKKFQQFRLAGINRVSIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL   +L+FLGR H+   A  A+ LA+ IFP+ SFDLIYA+ +Q + +W+ ELQ A+  
Sbjct: 130 QSLRLNNLKFLGRTHDVESAKHAVTLAKTIFPKFSFDLIYAIAEQEVEEWKQELQEAMLI 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  H+S+YQLTIEKGT F+  ++ G   LPS+  A  LYN T       G H YEISN+S
Sbjct: 190 AGSHVSIYQLTIEKGTKFFGDYRKGKFTLPSDETAAKLYNYTNHYLKNLGYHRYEISNYS 249

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV--------AISIEKHPESWL-KMV 308
            +GAE  HNLNYW YG Y+GIGPGAHSR+   ++ V        AI+++ +P+ WL  ++
Sbjct: 250 KIGAECYHNLNYWNYGSYLGIGPGAHSRIVCYNNGVNGDSKSVKAITMQYNPQKWLNDIL 309

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQR 364
             +G+ + +   L+ +    E ++MGLRL  GIS      L G N    L ++    LQ 
Sbjct: 310 LASGNGIQDLHTLTDDDVIKEVIIMGLRLSTGISHDRLLELTGCNFQQALSMKYVHQLQD 369

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G+I  +  + +R T + M + + ++  + +
Sbjct: 370 TGYI-VMSNNNIRLTDKAMLVYNYIVNKIVI 399


>gi|51473375|ref|YP_067132.1| coproporphyrinogen III oxidase [Rickettsia typhi str. Wilmington]
 gi|51459687|gb|AAU03650.1| Coprogen oxidase [Rickettsia typhi str. Wilmington]
          Length = 391

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 163/383 (42%), Positives = 240/383 (62%), Gaps = 8/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +I+S+  E+++ + +   + I SIF
Sbjct: 10  TNDLSIYIHWPFCLSKCPYCDFNSHVVS-TIDYNQWIKSYEKEIEYFKFIIQNKYIKSIF 68

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  + +I++ I     + +  EIT+E NP+S E    + ++ AG+NRIS+
Sbjct: 69  FGGGTPSLMHPLIVEVIINKINNLGIIDNKTEITLETNPTSFEAEKLKAFKSAGINRISI 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H++ +AI  I  A  I PR+SFDLIYA   QT+  WE EL++A+
Sbjct: 129 GVQSLKEDDLKTLGRTHDSMQAIKTIEAANTIVPRVSFDLIYARNGQTLKDWEEELKQAM 188

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A  H++LYQLTIEKGT FYK+ K+G+L+LPS + A ++Y  T     +     YEISN
Sbjct: 189 SLATSHIALYQLTIEKGTPFYKLFKNGNLILPSVDEAAEMYEWTNHYLESKKYFRYEISN 248

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ LG E LHNL YW Y  Y+GIGPGAHSR+   ++ V AI +  +P  WL  VR     
Sbjct: 249 YAVLGHECLHNLTYWNYNSYLGIGPGAHSRIIENANSVLAIMMLHNPAKWLDAVRIKNVG 308

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L++++  +E LMMGLRLR+GI++   E          LD+   ++ Q QG I+ 
Sbjct: 309 IQTHAKLTNQEIIEEILMMGLRLRKGINIPTLEQKLSAKLENILDMNNLQHYQNQGLIKL 368

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
            +   +  T +G+ + + ++  L
Sbjct: 369 DE--HIYLTDKGLMLHNYIVPRL 389


>gi|67459492|ref|YP_247116.1| coproporphyrinogen III oxidase [Rickettsia felis URRWXCal2]
 gi|67005025|gb|AAY61951.1| Probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia felis URRWXCal2]
          Length = 386

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 159/383 (41%), Positives = 240/383 (62%), Gaps = 4/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +++L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 5   ADNLSIYIHWPFCLSKCPYCDFNSHVVS-TIDHHQWLKSYETEIEYFKDIIQNKYIKSIF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 64  FGGGTPSLMNPVVVAGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKSAGINRVSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  I  A +IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 124 GVQSLKEDDLKKLGRTHDALQAIKTIEAANSIFPRVSFDLIYARSGQKLKDWQEELKQAM 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 184 RLANGHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESQKYLRYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++    E LHNL YW Y +Y+GIGPGAHSR ++  S   AI +   PE WL  V+     
Sbjct: 244 YALANQECLHNLTYWNYNNYLGIGPGAHSRIIEPASSVSAIMMWHKPEKWLDSVKTKNVG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQF 373
           +     L++++  +E LMMGLRL+ GI++ + E      L DI    NLQ     + ++ 
Sbjct: 304 IQTNAKLTNQEIIEEILMMGLRLKSGINIAELEQKINTKLVDILDMNNLQNYQNQDLIKL 363

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
            + +  T +G+ +   ++  L +
Sbjct: 364 DKNISLTDKGLMLHSYIVPRLII 386


>gi|85708629|ref|ZP_01039695.1| coproporphyrinogen III oxidase [Erythrobacter sp. NAP1]
 gi|85690163|gb|EAQ30166.1| coproporphyrinogen III oxidase [Erythrobacter sp. NAP1]
          Length = 383

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 175/378 (46%), Positives = 238/378 (62%), Gaps = 10/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+HWPFC KKCPYCDFNSHVR   V  + + ++ + +++   +  G   ++SIFFGGG
Sbjct: 4   ALYIHWPFCAKKCPYCDFNSHVRE-SVDIDLWERALIADLRAEAREGGYEKLTSIFFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P+ ++ +L+   K W  +  +EIT+EANPSSVE  NF     AG+NR+SLGVQS
Sbjct: 63  TPSLMPPKLVSALLNEAEKLWGFAPEIEITLEANPSSVEAANFAALASAGINRVSLGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L++++LR+LGR H A EAI A+ +A+  F R+SFDLIYALP QT  QWE +L RALS+  
Sbjct: 123 LDDKTLRWLGRLHGAQEAIGALDVAQAHFARVSFDLIYALPDQTAEQWEAQLTRALSFGT 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLYQLTIE GT F    + G       + A +L+ LTQS+TSA GL AYE SNH+  
Sbjct: 183 SHMSLYQLTIEPGTRFETDVRLGRFAPLDNDEAAELFALTQSLTSAAGLPAYETSNHAHP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HNL YWRY DY G+GPGAH R        A    K PE++LK V +  H + E+ 
Sbjct: 243 DDESRHNLTYWRYQDYAGVGPGAHGR----RGGFATVRHKKPENFLKAVNERAHGISEQR 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQGFIERVQFSR 375
            L  ++ A E LMMGLRL EG+ +   E       G  +D    ++L+  G I + +  R
Sbjct: 299 LLDPKEAASEALMMGLRLVEGVDLSALEARFRQDRGEMVDAGKLKHLKDIGLIWQ-EDER 357

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T  G  +LD+V+ +L
Sbjct: 358 IGLTDAGRPVLDAVLGDL 375


>gi|103485753|ref|YP_615314.1| coproporphyrinogen III oxidase [Sphingopyxis alaskensis RB2256]
 gi|98975830|gb|ABF51981.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingopyxis alaskensis RB2256]
          Length = 381

 Score =  325 bits (834), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 173/381 (45%), Positives = 238/381 (62%), Gaps = 14/381 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVHWPFCV KCPYCDFNSHVR   V QE +  + L +++    +   R ++SIFFGG
Sbjct: 5   LALYVHWPFCVSKCPYCDFNSHVRD-SVEQEVWRAALLADLRHEAAVLPGRRVASIFFGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +A ++   A  W ++ + EIT+EANP+S EV  F     AGVNR+S+GVQ
Sbjct: 64  GTPSLMPAATVAAVIAEAAALWGLTDDCEITLEANPNSAEVAAFADLAAAGVNRVSIGVQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S + Q+L FLGR H+  EA  AI +A+  F R+SFDLIYA P QT+  WE EL  AL + 
Sbjct: 124 SFDAQALAFLGRAHSEDEARRAIAMAQEHFARVSFDLIYARPGQTLAAWEGELADALGFG 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLYQLTIE GT F+ +   G+L +P  + A DL++ TQ++T A GL  YE+SNH+ 
Sbjct: 184 TGHLSLYQLTIEPGTRFWALAAKGELTIPDGDAAADLFDATQAMTRAAGLPRYEVSNHAR 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVV 316
            G ES HNL YWRY DY G+GPGAH R      R+  + E+H  PE+++  V +NGH + 
Sbjct: 244 PGEESRHNLAYWRYADYAGVGPGAHGR------RLRQATERHRKPENFIAAVTRNGHGLK 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
            +  LS  ++A E ++MGLRL EG+ +   E  +G      +D +    L  QG +    
Sbjct: 298 VETDLSGRERATEAMLMGLRLTEGVDLARVEARSGLPRADFVDADAVARLAGQGLLV-AD 356

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             RL  T  G+ +LDS+++ +
Sbjct: 357 GDRLAVTGAGILLLDSILSEV 377


>gi|46201193|ref|ZP_00055595.2| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Magnetospirillum magnetotacticum MS-1]
          Length = 375

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 171/381 (44%), Positives = 233/381 (61%), Gaps = 13/381 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S   G+Y+HWPFC+ KCPYCDFNSH     V    + ++ L E+      T  R+ +S+F
Sbjct: 3   SPGFGIYIHWPFCLSKCPYCDFNSHAG-LAVDHGRWRKALLAELDHFAAQTPDRTPTSVF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP+    ++  +   W    ++E+T+EANP+SVE + F+ +R AGVNR+SL
Sbjct: 62  FGGGTPSLMEPETAGALIAMVKSRWASGPDLEVTLEANPTSVEADRFRAFRDAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L+ +SL FLGR H+  EA+AA+ LA+  FPR+SFDLIY+ P QT  QW  EL RAL
Sbjct: 122 GIQALDPESLAFLGRRHSVDEALAALSLAQATFPRVSFDLIYSRPGQTQAQWRAELARAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A +HLSLYQLTIE GT F  +H  G   LP E+ A   + LTQ +    GL AYEISN
Sbjct: 182 DLAGEHLSLYQLTIEDGTAFAPLHARGGFALPDEDEATAQFELTQEMCERAGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+   A+  HNL YW+ G ++GIGPGAH R        A++  + P  WL  V   GHA 
Sbjct: 242 HARANAQCRHNLTYWQGGAWLGIGPGAHGRFG----GEALAQTRSPGPWLAQVESQGHAT 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQF 373
             +  L   ++  E ++MGLRLR G+      +LA   + LD E    +   GF+  VQ 
Sbjct: 298 ETRYVLDPAERLSELVLMGLRLRNGLGPA---LLAEVRQVLDAEGLARMIADGFL--VQD 352

Query: 374 SR-LRCTQRGMTMLDSVIANL 393
           +R LR T RG  +L++V+  L
Sbjct: 353 ARGLRTTDRGRLVLNAVLGQL 373


>gi|91205960|ref|YP_538315.1| coproporphyrinogen III oxidase [Rickettsia bellii RML369-C]
 gi|157826679|ref|YP_001495743.1| coproporphyrinogen III oxidase [Rickettsia bellii OSU 85-389]
 gi|91069504|gb|ABE05226.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia bellii RML369-C]
 gi|157801983|gb|ABV78706.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia bellii OSU 85-389]
          Length = 388

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 150/334 (44%), Positives = 218/334 (65%), Gaps = 2/334 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M    +N L +Y+HWPFC+ KCPYCDFNSH+    +  +N+++S+  E+++ + +   + 
Sbjct: 1   MKEVKANDLSIYIHWPFCLSKCPYCDFNSHIAN-SIDDDNWLKSYEKEIEYFKDIIQNKY 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SIFFGGGTPSL+ P+ +  I++ I+    +    EIT+EANP+S E   F+ ++ AG+
Sbjct: 60  IRSIFFGGGTPSLMNPKIVEGIINKISGFARIDKQTEITLEANPTSFETEKFKAFKLAGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+GVQSL E  L+ LGR H++ +AI  I  A  IFPR+SFDLIYA   Q +  W+ E
Sbjct: 120 NRVSIGVQSLRENDLKKLGRTHDSLQAIKTIESASKIFPRVSFDLIYARSGQELKDWQQE 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+     H+SLYQLTIEKGT FYK+  DG+L+LP+ ++A ++Y  T     +     
Sbjct: 180 LKQAMELVTGHISLYQLTIEKGTPFYKLFHDGNLILPNSDLAAEMYEWTNDYLESQKYFR 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YEISN++  G E +HNL YW Y DY+GIGPGAHSR+      V AI +   PE WL+ V 
Sbjct: 240 YEISNYAKKGQECVHNLTYWNYNDYLGIGPGAHSRIIENPSSVSAIMMWHKPEKWLEAVN 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              + V     L+ ++  +E LMMGLRL++GI++
Sbjct: 300 NKNNGVQTNVKLTKQEIIEEILMMGLRLKDGINI 333


>gi|15604050|ref|NP_220565.1| coproporphyrinogen III oxidase [Rickettsia prowazekii str. Madrid
           E]
 gi|3860741|emb|CAA14642.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE (hemN)
           [Rickettsia prowazekii]
 gi|292571770|gb|ADE29685.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia prowazekii Rp22]
          Length = 399

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 161/383 (42%), Positives = 240/383 (62%), Gaps = 8/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSH+    +    +++S+  E+++ + +   + I SIF
Sbjct: 18  ANDLSIYIHWPFCLSKCPYCDFNSHIVS-TIDYNQWLKSYEKEIEYFKFIIQNKYIKSIF 76

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  + +I++ I     + +  EIT+E NP+S E    + ++ AG+NR+S+
Sbjct: 77  FGGGTPSLMQPLIVEVIINKINNLGIIDNKTEITLETNPTSFETEKLKAFKSAGINRVSI 136

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H++ +AI  I  A  I PR+SFDLIYA   QT+  WE EL++A+
Sbjct: 137 GVQSLKEDDLKKLGRTHDSMQAIKTIEAANTIVPRVSFDLIYARNGQTLKDWEKELKQAM 196

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H++LYQLTIEKGT FYK+ K+G+L+LP+ + A ++Y  T     +     YEISN
Sbjct: 197 YLATSHIALYQLTIEKGTPFYKLFKNGNLILPTSDEAAEMYEWTNHYLESKKYFRYEISN 256

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ LG E LHNL YW Y  Y+GIGPGAHSR+   S+ V AI +  +P  WL  V      
Sbjct: 257 YARLGHECLHNLTYWNYNSYLGIGPGAHSRIIENSNSVLAIMMLHNPAQWLDAVSTKNVG 316

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRN-LDIECERNLQRQGFIER 370
           +     L++++  +E LMMGLRLR+GI +   E     A  N LDI   ++ Q QG I+ 
Sbjct: 317 IQTHSKLTNKEIIEEILMMGLRLRKGIKISKLEQRLSTALENILDINNLQHYQNQGLIKL 376

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
            +   +  T +G+ + + ++  L
Sbjct: 377 DE--HIYLTDKGLMLHNYIVPRL 397


>gi|294085189|ref|YP_003551949.1| coproporphyrinogen III oxidase-like protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664764|gb|ADE39865.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 410

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 167/356 (46%), Positives = 217/356 (60%), Gaps = 5/356 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           + LG+YVHWPFC  KCPYCDFNSHV    +  + F+ ++LTEM +M  QL  P S+SSIF
Sbjct: 17  SPLGLYVHWPFCKAKCPYCDFNSHVSN-DIDADAFLAAYLTEMTYMADQLEQPASLSSIF 75

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+    +  I+D  A  +     +EI+ EANP+SVE +    +  AGVNRIS+
Sbjct: 76  FGGGTPSLMPAFVVEGIIDKAAAIFGFMPAIEISAEANPTSVEASKMLDFHHAGVNRISM 135

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL + +L FLGR H+A EA  A+   R  F  MS DL+YA P QT   W  EL  AL
Sbjct: 136 GVQSLRDDTLAFLGREHSADEARKALTTVRTAFDNMSIDLMYATPNQTPADWHDELSTAL 195

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  +DHLSLYQLTIE GT FY   + G+++   ++ A  L+++T+ +T   GL AYEISN
Sbjct: 196 ALGLDHLSLYQLTIESGTHFYTRQRRGEVMALDDDHAATLFDITRMLTRDAGLPAYEISN 255

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G E  HNL YW+ G+++GIGPGAHSR     HR+ IS  + P  WL  + K+GHA 
Sbjct: 256 HAKDGYECRHNLIYWQSGNWLGIGPGAHSRFTQQDHRIGISTRRSPAGWLAAIAKDGHAT 315

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFI 368
                      A E LMMGLRL  G+S+       G     LDIE  R     G++
Sbjct: 316 DTLVTDGKNDWAAEMLMMGLRLTSGLSLARLSAACGPYHNWLDIEGLRKCHDAGWL 371


>gi|254452932|ref|ZP_05066369.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 238]
 gi|198267338|gb|EDY91608.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 238]
          Length = 382

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 166/377 (44%), Positives = 235/377 (62%), Gaps = 9/377 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV    V Q  +  +F  E+  +  +TG R ++S+FFGG
Sbjct: 10  FGLYIHWPFCQAKCPYCDFNSHVV-ASVDQTRWAAAFEKEIDRIADMTGDRVLNSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++   +  IL  I K W +++++E+T+EANP+S+E   F GY  AGVNR+S+GVQ
Sbjct: 69  GTPSMMDVSTVDRILTRIQKRWRLANDLEVTLEANPTSIEAQRFAGYYAAGVNRVSVGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+A EA+AA+ +AR  F R+SFDLIYA   Q++ QW+ EL RAL + 
Sbjct: 129 ALNDADLKALGRLHSADEAMAAVEIARTTFDRVSFDLIYARQDQSVGQWQAELTRALEFE 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            DHLSLYQLT+E GT F    K G L  LP+E++  DL+++TQ      GL AYE+SNH+
Sbjct: 189 PDHLSLYQLTVEDGTAFGDRFKRGLLRGLPNEDLGADLWDVTQDACEKAGLPAYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +G ES HNL YW+ GD+ GIGPGAH R+ +   R      K P  W+  V      +  
Sbjct: 249 KIGQESRHNLIYWQSGDWAGIGPGAHGRLTLDGVRRETVCVKSPGMWIAQVESGALDLDT 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVK-DWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
              L +    +E ++MGLR+ EGI +  DW       ++      L   G +ER   +RL
Sbjct: 309 GSALGASDILEERVLMGLRMVEGIEMSADWMTDKFNKIN-----ELVVIGHLERTT-NRL 362

Query: 377 RCTQRGMTMLDSVIANL 393
             T +G  +L++VI++L
Sbjct: 363 TVTAQGRPVLNAVISHL 379


>gi|229586416|ref|YP_002844917.1| coproporphyrinogen III oxidase [Rickettsia africae ESF-5]
 gi|228021466|gb|ACP53174.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia africae ESF-5]
          Length = 400

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 158/383 (41%), Positives = 234/383 (61%), Gaps = 4/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHNQWLKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NRIS+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRISI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR+   S  V AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQF 373
           +     L+ ++  +E LMMGLRL +GI++   E      L+ I    NL+    ++ ++ 
Sbjct: 318 IQTNTNLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQALDLIRL 377

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
              +  T +G+ +   ++  L +
Sbjct: 378 DENIYLTDKGLMLYSYIVPRLII 400


>gi|15892142|ref|NP_359856.1| coproporphyrinogen III oxidase [Rickettsia conorii str. Malish 7]
 gi|15619271|gb|AAL02757.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia conorii str. Malish 7]
          Length = 400

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 158/383 (41%), Positives = 233/383 (60%), Gaps = 4/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFCV KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCVSKCPYCDFNSHVAS-TIDHNQWLKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++  G+NRIS+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISTLAIIDNQTEITLETNPTSFETEKFKAFKAVGINRISI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR+   S  V AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQF 373
           +     L+ ++  +E LMMGLRL +GI++   E      L+ I    NL+    ++ ++ 
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQALDLIRL 377

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
              +  T +G+ +   ++  L +
Sbjct: 378 DENIYLTDKGLMLYSYIVPRLII 400


>gi|157964241|ref|YP_001499065.1| coproporphyrinogen III oxidase [Rickettsia massiliae MTU5]
 gi|157844017|gb|ABV84518.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia massiliae MTU5]
          Length = 388

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 159/383 (41%), Positives = 236/383 (61%), Gaps = 5/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 8   ANDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHNQWLKSYETEIEYFKDIIQNKYIKSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 67  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRVSI 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 127 GVQSLKEDDLKKLGRTHDCVQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 187 QLATSHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR+   S  V AI +   P  WL  V KN   
Sbjct: 247 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPAKWLDSVTKNV-G 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQF 373
           +     L+ ++  +E LMMGLRL +GI++   E      L+ I    NL+    ++ ++ 
Sbjct: 306 IQTNTKLTHQEVIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQALDLIRL 365

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
            + +  T +G+ +   ++  L +
Sbjct: 366 DKNIYLTDKGLMLHSYIVPRLII 388


>gi|34580828|ref|ZP_00142308.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia sibirica 246]
 gi|28262213|gb|EAA25717.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia sibirica 246]
          Length = 400

 Score =  321 bits (822), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 157/383 (40%), Positives = 233/383 (60%), Gaps = 4/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSH+    +    + +S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSKCPYCDFNSHIAS-TIDHNQWFKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NRIS+
Sbjct: 78  FGGGTPSLMHPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRISI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR+   S  V AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQF 373
           +     L+ ++  +E LMMGLRL +GI++   E      L+ I    NL+    ++ ++ 
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLEHILDMNNLKHYQALDLIRL 377

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
              +  T +G+ +   ++  L +
Sbjct: 378 DENIYLTDKGLMLYSYIVPRLII 400


>gi|157828095|ref|YP_001494337.1| coproporphyrinogen III oxidase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932797|ref|YP_001649586.1| coproporphyrinogen III oxidase [Rickettsia rickettsii str. Iowa]
 gi|157800576|gb|ABV75829.1| coproporphyrinogen III oxidase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907884|gb|ABY72180.1| oxygen-independent coproporphyrinogen-III oxidase [Rickettsia
           rickettsii str. Iowa]
          Length = 400

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 157/383 (40%), Positives = 234/383 (61%), Gaps = 4/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSKCPYCDFNSHVASI-IDHNPWLKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRVSI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR+   S  V AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSLVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQF 373
           +     L+ ++  +E LMMGLRL +GI++   E      L+ I    NL+    ++ ++ 
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTTLENILDMNNLKHYQALDLIRL 377

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
              +  T +G+ +   ++  L +
Sbjct: 378 DENIYLTDKGLMLYSYIVPRLII 400


>gi|241563370|ref|XP_002401676.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
 gi|215501868|gb|EEC11362.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
          Length = 402

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/385 (41%), Positives = 236/385 (61%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 21  ANDLSIYIHWPFCLSKCPYCDFNSHVAG-NIDHNQWLKSYETEIEYFKAIIQNKYIKSIF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EITIE NP+S E   F+ ++ AG+NR+S+
Sbjct: 80  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITIETNPTSFETEKFKAFKSAGINRVSI 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  +  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 140 GVQSLKEDDLKKLGRTHDALQAIKTVEAANTIFPRVSFDLIYARSGQKLKDWQEELKQAM 199

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 200 QFANGHISLYQLTIEKGTPFYKLFKEGNLILPHSDEAAEMYEWTNHYLESKKYFRYEISN 259

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +  E LHNL YW Y +Y+GIGPGAHSR+   S  V AI +   PE WL  V      
Sbjct: 260 YAQVEHECLHNLAYWNYNNYLGIGPGAHSRIIDASSSVLAIMMWHKPEKWLDSVNTKNVG 319

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q Q  I+ 
Sbjct: 320 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQSQDLIKL 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 380 DK--NIYLTDKGLMLHSYIVPRLII 402


>gi|260429507|ref|ZP_05783484.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citreicella sp. SE45]
 gi|260420130|gb|EEX13383.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citreicella sp. SE45]
          Length = 383

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 164/379 (43%), Positives = 229/379 (60%), Gaps = 4/379 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+YVHWPFC  KCPYCDFNSHV  + V Q  + ++ + E+     LT  R + SI+
Sbjct: 7   DGGFGLYVHWPFCEAKCPYCDFNSHVTAH-VDQTRWAEALVRELARYGALTEGRMLRSIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P+ +  +L     +W  ++++EIT+EANP SVE+  F+G+   GVNR+SL
Sbjct: 66  FGGGTPSLMQPETVGAVLRASRDHWAWANDIEITLEANPRSVEIRKFEGFAGVGVNRVSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L    LR LGR H   EA++A+ +AR+ F R+SFDLIY    Q++  WE EL+ AL
Sbjct: 126 GVQALRPDDLRRLGRLHGVDEALSALDIARSTFSRVSFDLIYGRQGQSLAAWETELREAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A DHLSLYQLTIE+GT F++  + G L  LP+E++  D+Y  TQ I  A G  AYE+S
Sbjct: 186 DLAGDHLSLYQLTIEEGTAFWERAQAGGLKGLPNEDLGADMYLATQDICGAAGFEAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+   A S HNL YWR GDY+GIGPGAH RV +   R A    + P  W+    + G  
Sbjct: 246 NHAQRDAMSRHNLVYWRGGDYVGIGPGAHGRVTLNGVRHASVARRLPGPWIAAA-EAGSG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
                 L+ E    E++MMG+RL EG+ ++    + G   +       Q  G I R   +
Sbjct: 305 DESLLPLTGEDVWAEYIMMGMRLSEGLDLERAREIGGTRFEEMPLEKFQDLGLIWR-DAT 363

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R   T +G  +L+++ + L
Sbjct: 364 RFGATLQGRMVLNTLTSEL 382


>gi|239948170|ref|ZP_04699923.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922446|gb|EER22470.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 400

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 158/385 (41%), Positives = 235/385 (61%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+  CPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSXCPYCDFNSHVAG-NIDHNQWLKSYETEIEYFKAIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EITIE NP+S E   F+ ++ AG+NR+S+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITIETNPTSFETEKFKAFKSAGINRVSI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  +  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDALQAIKTVEAANTIFPRVSFDLIYARSGQKLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QFANGHISLYQLTIEKGTPFYKLFKEGNLILPHSDEAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +  E LHNL YW Y +Y+GIGPGAHSR+   S  V AI +   PE WL  V      
Sbjct: 258 YAQVEHECLHNLAYWNYNNYLGIGPGAHSRIIDASSSVLAIMMWHKPEKWLDSVNTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q Q  I+ 
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQSQDLIKL 377

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 378 DK--NIYLTDKGLMLHSYIVPRLII 400


>gi|157825359|ref|YP_001493079.1| coproporphyrinogen III oxidase [Rickettsia akari str. Hartford]
 gi|157799317|gb|ABV74571.1| coproporphyrinogen III oxidase [Rickettsia akari str. Hartford]
          Length = 393

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/383 (40%), Positives = 236/383 (61%), Gaps = 4/383 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +Y+HWPFC+ KCPYCDFNSHV    +    +I+S+ TE+++ + +   + I SIF
Sbjct: 12  ADDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHNQWIKSYETEIEYFKNIIQNKYIKSIF 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  + LI++ I     + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 71  FGGGTPSLMNPVLVELIINKINNLAILDNRTEITLETNPTSFETEKFKAFKSAGINRVSI 130

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  I  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 131 GVQSLKEDDLKKLGRTHDALQAIKTIEQANGIFPRVSFDLIYARSGQKLKDWQEELKQAM 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT FYK+  +G+L++P  + A ++Y  T    ++     YEISN
Sbjct: 191 QLANGHISLYQLTIEKGTPFYKLFNEGNLIVPHSDAAAEMYEWTNHYLASKKYFRYEISN 250

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHA 314
           ++    + LHNL YW Y   +GIGPGAHSR+   S  VA  +  H PE WL  V+     
Sbjct: 251 YALANQKCLHNLTYWHYNSCLGIGPGAHSRIIEPSGSVAAIMMWHKPEKWLDSVKTKNVG 310

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM-LAGRNLDIECERNLQRQGFIERVQF 373
           +     L+ ++  +E LMMGLRL +GI++   E  +  + +DI    NL+    ++ ++ 
Sbjct: 311 IQTNAKLTHQEIIEEILMMGLRLSKGINISTLEQKINAKLMDILDMNNLKHYQALDLIKL 370

Query: 374 SR-LRCTQRGMTMLDSVIANLAV 395
            + +  T +G+ +   ++  L +
Sbjct: 371 DKNIYLTDKGLMLHSYIVPRLII 393


>gi|296532220|ref|ZP_06894969.1| possible coproporphyrinogen dehydrogenase [Roseomonas cervicalis
           ATCC 49957]
 gi|296267450|gb|EFH13326.1| possible coproporphyrinogen dehydrogenase [Roseomonas cervicalis
           ATCC 49957]
          Length = 439

 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 164/345 (47%), Positives = 216/345 (62%), Gaps = 2/345 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PR 69
           + G     + +YVHWPFC+ KCPYCDFNSHVR  +V    +  +   E+    +  G  R
Sbjct: 51  ICGAMPEPIALYVHWPFCLAKCPYCDFNSHVRE-RVDAARYGAALRRELAHEAERLGEKR 109

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++SIFFGGGTPSL+ P+ +A ++    + +    ++EIT+EANP+SVE+      R+AG
Sbjct: 110 PLASIFFGGGTPSLMPPEVVADVIAEARRLFEPLPDIEITLEANPTSVEIAKLAALREAG 169

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR SLG+QSL++++L FLGR H+A +A+AA+  AR +FPR+SFDLIYA P Q + +W  
Sbjct: 170 VNRASLGIQSLQDKALGFLGRQHDAKQAVAALEAARALFPRISFDLIYARPGQGLEEWRA 229

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL++AL+ A DHLSLYQLTIE GT F   +  G   LP    A  LY  T       GL 
Sbjct: 230 ELRQALALAADHLSLYQLTIEPGTRFATEYARGAFALPEGEEAAALYYATGEEAGRFGLL 289

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN++  GAES HNL YWRYGDY+GIG GAH RV      VA    + PE WL  V 
Sbjct: 290 PYEVSNYARPGAESRHNLAYWRYGDYLGIGAGAHQRVTRDGTVVAARRHRAPEEWLSRVE 349

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             GHAV  +E L+   +A E L+MGLRL EG+S    +   G  L
Sbjct: 350 AEGHAVTREEHLAPLDRAREALLMGLRLSEGVSPARLQARTGLTL 394


>gi|157803377|ref|YP_001491926.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel]
 gi|157784640|gb|ABV73141.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel]
          Length = 386

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/383 (41%), Positives = 233/383 (60%), Gaps = 8/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +Y+HWPFC+ KCPYCDFNSHV    +  E +++S+  E+++ + +   + I SIF
Sbjct: 5   TDDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHEQWLKSYEREIEYFKPIIQNKYIKSIF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  + +I++ I     +    EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 64  FGGGTPSLMDPVIVEVIINKIINIAIIDHQTEITLETNPTSFETEKFKAFKSAGINRVSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 124 GVQSLKEDDLKKLGRTHDCMQAIKTIETANTIFPRVSFDLIYARSGQKLKDWQEELKQAM 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGTLFYK+ +DG L+LP  + A ++Y  T     +     YEISN
Sbjct: 184 QLATSHISLYQLTIEKGTLFYKLFRDGTLILPHSDEAAEMYEWTNHYLESKKYFRYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ +  E LHNL YW Y  Y+GIGPGAHSR ++  S  +AI +   PE WL  V+     
Sbjct: 244 YALVSQECLHNLTYWNYNSYLGIGPGAHSRIIEPSSSVLAIMMWHKPEKWLDSVKIKNVG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++   E LMMGLRL+ GI++   E          LD+   ++ Q Q  I+ 
Sbjct: 304 IQTNIKLTHQEVIAEMLMMGLRLKSGINLSILEQKLNTKLENILDMNNLKHYQNQDLIKL 363

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
            Q   +  T +G+ +   ++  L
Sbjct: 364 DQ--NVYLTDKGLMLHSYIVPRL 384


>gi|149184522|ref|ZP_01862840.1| coproporphyrinogen III oxidase [Erythrobacter sp. SD-21]
 gi|148831842|gb|EDL50275.1| coproporphyrinogen III oxidase [Erythrobacter sp. SD-21]
          Length = 384

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 167/387 (43%), Positives = 222/387 (57%), Gaps = 29/387 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFGGG 79
           +Y+HWPFC+ KCPYCDFNSHVR  +     +  + L +M+     T     + SIFFGGG
Sbjct: 5   LYIHWPFCLAKCPYCDFNSHVRE-RTDMAEWEAALLADMRAEFAATKSEEPLISIFFGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P  +A +L    + W  S ++EIT+E NPSSVE  NF      G+NR+SLGVQS
Sbjct: 64  TPSLMPPALVASLLREAERLWGFSPDIEITLEGNPSSVEAANFADLANVGINRVSLGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L    L+FLGR H   EA+ A   A+ +F R+S DLIYA P QT  +W  EL  AL+   
Sbjct: 124 LRGDVLKFLGRLHGVEEALKATETAQRLFDRVSIDLIYARPDQTEDEWRQELSEALALGT 183

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLYQLTIE  T F    + G     +++ A DL+ LT+ +T+A G+ AYEISNH+  
Sbjct: 184 SHLSLYQLTIEPSTRFATDVRRGVFDPLADDPAADLFALTREMTAAAGVPAYEISNHARP 243

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YWRY DY GIGPGAH R       VA +  K PE++L  V   G  + E  
Sbjct: 244 GEESRHNLTYWRYRDYHGIGPGAHGR----RGGVATTRHKKPENFLAAVTAQGDGIAEHR 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE---------- 369
            L   +QA E ++MGLRL EG+ ++D   L GR         ++R   +E          
Sbjct: 300 VLGLREQASEAMLMGLRLTEGVDLQD---LKGRF-------GVERAQLVEPAKLALYGDL 349

Query: 370 ---RVQFSRLRCTQRGMTMLDSVIANL 393
              R++  RL  T  GM +LD+++  +
Sbjct: 350 GLVRMEGERLFVTDAGMPLLDALLGEI 376


>gi|302381544|ref|YP_003817367.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192172|gb|ADK99743.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 383

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 229/381 (60%), Gaps = 9/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             + VYVHWP+C + CPYCDFN    R ++  Q   +++ LT++     L G R ++SIF
Sbjct: 6   GPVAVYVHWPYCARICPYCDFNVVRDRGWRDEQAVLVEAILTDLSAQAALVGARPLASIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P ++A +++     +     VEIT+EANP+  E  +F   R AGV+R+SL
Sbjct: 66  FGGGTPSLMRPDDVARVVERARALFPSGEPVEITLEANPTDAEAAHFAALRDAGVDRLSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL++ +L FLGRNH+A+EA  AI  A   F R+S DLIYALP QT+  W   L  A+
Sbjct: 126 GVQSLDDAALAFLGRNHSAAEARRAIETAGATFDRLSIDLIYALPGQTVHAWSDALTEAV 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   +H+S Y LTIE  T F + ++ G LV P E+ A DLY  TQ++  A G  AYE+SN
Sbjct: 186 AMGFEHVSPYHLTIEAATAFGRAYERGTLVPPDEDRAADLYEATQAVLGAAGFEAYEVSN 245

Query: 256 HS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           H+  + A S HNL+ WR  DYIG+GPGAH R+ +   R A   E+    +++ V  +G  
Sbjct: 246 HARGVAARSAHNLHVWRGHDYIGVGPGAHGRLTLDGVRTATVAERRIGPYVEGV-ASGAP 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   L + + A+E +++GLR  EG+++ D   L+G  L +       L   GF+  ++
Sbjct: 305 WSETARLDARETAEERVLLGLRTVEGVALGD---LSGLGLPVAAGPVAALIEDGFVA-IE 360

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             RL  T RG  +LD+V+  L
Sbjct: 361 EGRLAATARGRPVLDAVLKAL 381


>gi|86136762|ref|ZP_01055340.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
 gi|85826086|gb|EAQ46283.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
          Length = 330

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 153/329 (46%), Positives = 215/329 (65%), Gaps = 5/329 (1%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++S+FFGGGTPSL+ P+ +A +++G  + W  ++++EIT+EANP SVE   F GYR A
Sbjct: 4   RVLNSVFFGGGTPSLMMPETVAAVIEGAREIWPFANDIEITLEANPGSVEAGRFAGYRDA 63

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GVNRIS+G+Q+L +  LR LGR H+ +EA AA  +ARN F R+SFDLIYA   Q +  W+
Sbjct: 64  GVNRISMGIQALNDVDLRRLGRIHSVAEARAAFDIARNCFDRVSFDLIYARQGQDLAHWK 123

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHG 247
            EL  AL+ A+DHLSLYQLTIE+GT F   +  G L  LP+++ A D+Y  TQ I +AHG
Sbjct: 124 SELTEALTMAIDHLSLYQLTIEEGTAFGDRYARGKLRDLPTDDSAADMYQATQEICAAHG 183

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           + AYEISNH+  G ES HN  YWRYGDY+GIGPGAH RV +   R A    + P +WLK 
Sbjct: 184 MPAYEISNHARPGEESRHNQIYWRYGDYVGIGPGAHGRVTLNGQRYATETHRAPGAWLKA 243

Query: 308 VRK-NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           V + +G ++ +   L  E  A E++MM +RL EG+ +  +  L+G+ L  +   +L   G
Sbjct: 244 VSEGSGESLCQA--LPREDTAIEYMMMSMRLAEGMDITRYAALSGQELPQDRIADLVNLG 301

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +       +R T +G  +L++V+  L V
Sbjct: 302 MVT-TSDQVIRATDQGRAVLNAVLRELLV 329


>gi|315497097|ref|YP_004085901.1| oxygen-independent coproporphyrinogen iii oxidase [Asticcacaulis
           excentricus CB 48]
 gi|315415109|gb|ADU11750.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           excentricus CB 48]
          Length = 380

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 153/369 (41%), Positives = 231/369 (62%), Gaps = 9/369 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSI 74
           S  + +Y+HWP+C + CPYCDFN    R +   +N   ++   +++      GPR + S+
Sbjct: 6   SAPVALYIHWPYCSRICPYCDFNVTRDRGQADTQNALFEAIRADLRMQASWLGPRRLVSV 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL++P  +A +++     + V++++EIT+EANP+  E+  ++ ++ AG+NR+S
Sbjct: 66  FFGGGTPSLMKPDWVAAVINEAKTLFPVTNDIEITLEANPTDAEIARYRAFQAAGINRLS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QSL + +LRFLGRNH+A EA+  +  A ++F R+S DLIYALP Q++  WE EL+RA
Sbjct: 126 IGIQSLNDAALRFLGRNHSAREALMGLETALSVFDRVSLDLIYALPDQSLENWEDELRRA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V+H+S YQLTIE  T F +  + G L +P        Y+ TQS+ +  G  AYE+S
Sbjct: 186 AHLGVEHISPYQLTIESETAFGRAARRGQLRIPDPERGEAFYDQTQSVLTELGYEAYEVS 245

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           NH+    A S HN+N W   DY+GIGPGAH R+     R A   E   ++++  VR+ GH
Sbjct: 246 NHARGKEARSKHNINVWEGVDYVGIGPGAHGRLTFDKARHATVAEPDLKAYIARVRETGH 305

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
           +V  +E LS E+ ++E LM+GLRL EG+ +   E +AG  L+   E  L   GF+E  + 
Sbjct: 306 SVT-REPLSPEEASEEALMLGLRLIEGVRL---ERIAGLPLNKSDE--LIAGGFLEATR- 358

Query: 374 SRLRCTQRG 382
            RLR T +G
Sbjct: 359 ERLRATPKG 367


>gi|254295451|ref|YP_003061474.1| oxygen-independent coproporphyrinogen III oxidase [Hirschia baltica
           ATCC 49814]
 gi|254043982|gb|ACT60777.1| oxygen-independent coproporphyrinogen III oxidase [Hirschia baltica
           ATCC 49814]
          Length = 383

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 157/378 (41%), Positives = 225/378 (59%), Gaps = 6/378 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWP+C K CPYCDFN +  + +   +  + +   +++  R+ TG R + ++F GG
Sbjct: 10  FGIYIHWPYCAKICPYCDFNVYAAKDR-NIDPLLLAIREDLKGWREKTGSRHVDTVFLGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ I  +L  IA+ W +  + EIT+EANP   ++N F G   AGVNR+SLGVQ
Sbjct: 69  GTPSLLPPEAIRQLLADIAELWPLRDDAEITLEANPD--DMNRFAGIADAGVNRLSLGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL++ +L FLGRNH+A  A+ AI   R  F  +S D IYALP Q+  +W+ EL   +   
Sbjct: 127 SLDDAALTFLGRNHSAKIALEAIGEGRRCFSSLSLDFIYALPNQSKEKWQAELSDIIDLG 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS- 257
            DHLSLY+LTIE+ T F K    GD    +E+VA DLY +TQ    A G  AYEISNH+ 
Sbjct: 187 ADHLSLYELTIEQRTAFGKAVSRGDWTPANEDVAADLYEVTQLEMEAAGYSAYEISNHAK 246

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +  ++ HN+ YW+ GD++G+GPGAH RV +   R+    EK P+ ++  V K G    +
Sbjct: 247 SVQHQAKHNIVYWKSGDWLGVGPGAHGRVTLDGKRLETISEKRPDKYISKVEKTGVG-AD 305

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
              LS E  A E +MMGLR+ +GI   D+E ++GR  D     +    G IE +  S L+
Sbjct: 306 YNPLSIEDIAAERVMMGLRMTQGILRSDFEKISGRCFDETAIASFISDGLIE-LDGSILK 364

Query: 378 CTQRGMTMLDSVIANLAV 395
            T  G  + D +   L +
Sbjct: 365 LTAEGCLLADYISQKLVL 382


>gi|16124400|ref|NP_418964.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           crescentus CB15]
 gi|221233083|ref|YP_002515519.1| oxygen-independent coproporphyrinogen-III oxidase [Caulobacter
           crescentus NA1000]
 gi|13421256|gb|AAK22132.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Caulobacter crescentus CB15]
 gi|220962255|gb|ACL93611.1| oxygen-independent coproporphyrinogen-III oxidase [Caulobacter
           crescentus NA1000]
          Length = 384

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 230/387 (59%), Gaps = 5/387 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR 69
           MT   + ++G+YVHWP+C + CPYCDFN    R +   Q     + + +++  R LTG R
Sbjct: 1   MTDPRAEAVGIYVHWPYCARICPYCDFNVVRDRGRTDEQRALADAIVADLEAQRALTGER 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + SIFFGGGTPSL++P  +A +++   + W+ + ++EI++EANP+  E + F     AG
Sbjct: 61  RLLSIFFGGGTPSLMDPAQVARVIETAKRLWSPADDLEISLEANPTDAETDRFAALAAAG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V R+SLGVQ+L++ SL+ LGRNH+A  A  AI  A   FPR+S DLIYA P QT   W  
Sbjct: 121 VQRLSLGVQALDDASLKALGRNHDAGAARRAIAAAARAFPRLSIDLIYARPGQTDAAWRA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL  A++   +H+S YQLTIE GT F +    G LV P E++A  L+  TQ I  A G  
Sbjct: 181 ELSEAIALGPEHVSPYQLTIEPGTAFDRAVGRGTLVTPDEDLAATLFETTQEIFEAAGFD 240

Query: 250 AYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           AYE+SNH+    A + HNL YWR  DY+G+GPGAH R+ +   R A +  +  + ++  V
Sbjct: 241 AYEVSNHARGEAARARHNLVYWRGVDYVGVGPGAHGRLALPEGRAATTAHRAIKDYIAAV 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
             +G    + E L+ E  A E L++G+R+  G+   +  +L G + D+   R+L   G +
Sbjct: 301 GDHGVG-FQSEILTPEDAALERLVLGMRIDAGVGFDEVAVL-GLDPDVAKVRDLVETGLL 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
              + +RLR T+ G  +LD +   LA 
Sbjct: 359 VEDR-ARLRATRAGRLVLDRLTGALAT 384


>gi|167644145|ref|YP_001681808.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
 gi|167346575|gb|ABZ69310.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
          Length = 387

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/379 (40%), Positives = 234/379 (61%), Gaps = 5/379 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           LGVYVHWP+C + CPYCDFN    R +   Q     + + +++  R LTGPR++ SIFFG
Sbjct: 12  LGVYVHWPYCARICPYCDFNVVRDRGRTDEQAALANAIVADLRAQRDLTGPRTLLSIFFG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P  +A +++     W+  +++EI++EANP+  E + F     AGV R+SLGV
Sbjct: 72  GGTPSLMDPGEVARVIETAKALWSPVADLEISLEANPTDAEADRFAALASAGVARLSLGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L++ +L  LGRNH+A  A  A+ +A   FPR+S DLIYA P QT+  W+ EL   L+Y
Sbjct: 132 QALDDAALALLGRNHDAGSARRAMAVAAKAFPRLSADLIYARPGQTVEAWKAELSALLAY 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S YQLTIE GT F +    G LV+P E++A  L+  TQ++  A G  AYE+SNH+
Sbjct: 192 GPEHVSPYQLTIEHGTAFDRAVGRGKLVVPDEDLAAALFETTQAVLEAAGFDAYEVSNHA 251

Query: 258 -FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               A S HNL YWR  DY+G+GPGAH R+ +   ++A +  +    +++ V + G    
Sbjct: 252 RGEAARSRHNLVYWRGHDYVGVGPGAHGRLSLTEGKLATTAHRKIVDYVRAVAETGVG-F 310

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           E+E L++ + A+E L++GLR+ +G+S  +  +L G + D    ++L     +     +RL
Sbjct: 311 ERETLTATEAAEERLLLGLRIDDGVSFAEIAVL-GLSPDTPKVKSLVEARLLVD-DPARL 368

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R T+ G  +LD +   LA 
Sbjct: 369 RATRSGRLVLDRLTGTLAT 387


>gi|254511341|ref|ZP_05123408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacteraceae bacterium KLH11]
 gi|221535052|gb|EEE38040.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacteraceae bacterium KLH11]
          Length = 336

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 158/329 (48%), Positives = 207/329 (62%), Gaps = 3/329 (0%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           T  R +++IFFGGGTPSL+ P+ +A I+D     W  ++++EIT+EANP SVE   F  Y
Sbjct: 8   TPDRVLNTIFFGGGTPSLMAPETVAAIIDEARALWHPANDMEITLEANPGSVEAGRFAAY 67

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
             AGVNRIS+GVQ+L +  LR LGR H  +EA AA  +A + F R+SFDLIYA   QT+ 
Sbjct: 68  GDAGVNRISMGVQALNDDDLRRLGRIHTVAEARAAFDIAHSCFDRVSFDLIYARQHQTLD 127

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITS 244
            W  EL  AL+ AVDHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ I  
Sbjct: 128 TWRAELTEALAMAVDHLSLYQLTIEDGTAFGDRYALGKLRGLPEDDSAADMYLATQEICD 187

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           AHGL AYE+SNH+  GAES HNL YWRYGDY+GIGPGAH R+ +  H+ A      P +W
Sbjct: 188 AHGLPAYEVSNHARPGAESQHNLIYWRYGDYVGIGPGAHGRLTLNGHKYATETYLSPNTW 247

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           L  V + G     +  L+ + Q  E+LMM +RL EG+ +  + +L+GR L      +L  
Sbjct: 248 LTAVAQ-GQGESSRTRLNRQDQGAEYLMMCMRLDEGLDIDRYMILSGRELPQRNLNSLVD 306

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G I  +  +RLR T  G  +L++VI  L
Sbjct: 307 LGMIT-LDENRLRATSNGRAVLNAVIREL 334


>gi|163742616|ref|ZP_02150002.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
 gi|161384201|gb|EDQ08584.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
          Length = 337

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 155/328 (47%), Positives = 213/328 (64%), Gaps = 3/328 (0%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +++IFFGGGTPSL+ P  +A I++   + W  S+++EI++EANP+SVE   F GYR A
Sbjct: 11  RVLNTIFFGGGTPSLMHPDTVAAIIETAREIWPFSNDIEISLEANPTSVEAGRFTGYRDA 70

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GVNRIS+G+Q+L +  L  LGR H+ SEA  A  +ARN F R+SFDLIYA   QT+  W+
Sbjct: 71  GVNRISMGIQALNDGDLHRLGRMHSVSEAQKAFDVARNCFDRVSFDLIYARQGQTLVGWQ 130

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHG 247
            EL +ALS A+DHLSLYQLTIE+GT F   +  G L  LPS++ A D+Y  TQ I   HG
Sbjct: 131 QELDQALSMAIDHLSLYQLTIEEGTAFGDRYARGKLRDLPSDDNAADMYLATQEICDKHG 190

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L AYE+SNH+  GAES HNL YWRYGDY+GIGPGAH R+ +   R A      P +WL  
Sbjct: 191 LPAYEVSNHARPGAESRHNLIYWRYGDYLGIGPGAHGRLTLDGTRYATETYLQPGAWLAA 250

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
             ++      +  L+ E  + E+LMMG+RL EG+ +  +  ++GR L  E   +L   G 
Sbjct: 251 A-EDHTGECSRIPLTPEDASAEYLMMGMRLVEGLDLDRFCAISGRTLSSERISHLCEIGM 309

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +E +   R++ T  G  +L++V+ +L V
Sbjct: 310 VE-LSDKRIQATDAGRAVLNAVLRDLLV 336


>gi|84684652|ref|ZP_01012553.1| coproporphyrinogen III oxidase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667631|gb|EAQ14100.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2654]
          Length = 348

 Score =  295 bits (755), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 154/342 (45%), Positives = 217/342 (63%), Gaps = 5/342 (1%)

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           ++L E+    + T  R +SS++FGGGTPSL++P  +  +LD +A +WT ++++EIT+EAN
Sbjct: 7   AYLAELARYARETPNRVLSSVYFGGGTPSLMDPAVVGAVLDAVAGHWTPANDIEITLEAN 66

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           PSSVE   F GY  AGVNR+S+G Q+L +  L+ LGR H+   A+AA+ +AR+ F R++F
Sbjct: 67  PSSVEAERFAGYAAAGVNRVSMGFQALNDGDLKALGRLHDVETALAALDVARSTFDRINF 126

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVA 232
           DLIY    Q++  W  ELQRA+ +  DHLSLYQLTIE GT F      G L  LP E+++
Sbjct: 127 DLIYGRQDQSLEDWTAELQRAVGFEPDHLSLYQLTIEDGTAFGDRFARGKLRGLPDEDLS 186

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
            D+Y  TQ I    GL AYE+SNH+  G ES HNL YW  GDYIGIGPGAH R+ +G  R
Sbjct: 187 ADMYFATQDICEDAGLLAYEVSNHAKPGQESRHNLIYWSAGDYIGIGPGAHGRLSLGGRR 246

Query: 293 VAISIEKHPESWL-KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +   E  P  WL + ++ NG A   +E LS   QA E+LMMGLR   G+ +  +E ++G
Sbjct: 247 WSTWTELSPSKWLDQALKHNGEA--GREALSRADQAGEYLMMGLRTTRGLDLDRYEAISG 304

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             LD    ++L + G++  +    L  T+ G  +L++VI  L
Sbjct: 305 VPLDEMVLQDLVKNGYLN-LNNRYLAPTRSGRAVLNAVIREL 345


>gi|254421054|ref|ZP_05034778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brevundimonas sp. BAL3]
 gi|196187231|gb|EDX82207.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brevundimonas sp. BAL3]
          Length = 390

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 161/381 (42%), Positives = 225/381 (59%), Gaps = 9/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +G+YVHWP+C + CPYCDFN    R +V  Q   +++ L +M+  R LTG R ++SIF
Sbjct: 13  SDVGLYVHWPYCSRICPYCDFNVVRDRGRVEEQAALVEAILADMRAQRALTGSRRLASIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+  A I+      +  +  +EI++EANP+  E   F     AGVNR+S+
Sbjct: 73  FGGGTPSLMAPEAAARIIAQAYDLFPPAGAIEISLEANPTDAEAARFAALAGAGVNRLSM 132

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++ +LRFLGR+H+A+EA  A+ LA   F R+S DLIYA P QT   W  EL  AL
Sbjct: 133 GVQALDDAALRFLGRDHSAAEARRAVDLAGRAFSRLSIDLIYARPGQTPADWATELGAAL 192

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S YQLT+E  T F +    G L+ P E+ A  LY  TQ++  A G  AYE+SN
Sbjct: 193 DMGFEHVSPYQLTLEPTTAFGRALARGTLIPPDEDQAAALYETTQTVLEAAGFDAYEVSN 252

Query: 256 HS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           H+  + A S HNL+ WR GDY+G+GPGAH R+ +   R A    +    ++  V   G  
Sbjct: 253 HARGVSARSAHNLHVWRGGDYLGLGPGAHGRLTLDGTRTATVAHRRIADYVAGV-GAGSP 311

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
            +E E L +   A+E L++GLR  EG  V    +LA   LD +     +L   GF+ R+ 
Sbjct: 312 WMETERLDAAGAAEEKLLLGLRTVEGAPVG---LLADLGLDADAAPTADLITDGFL-RLS 367

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             RL  T RG  +LD V+  L
Sbjct: 368 GGRLVATPRGRPVLDGVLKAL 388


>gi|218670664|ref|ZP_03520335.1| coproporphyrinogen III oxidase [Rhizobium etli GR56]
          Length = 231

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 127/212 (59%), Positives = 162/212 (76%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKETAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMQPETVAAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P QT+  WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIVLARDIFPRMSFDLIYARPDQTVEDWERE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           L+ A++YAVDHLSLYQLTIE+GT   +  + G
Sbjct: 196 LKHAIAYAVDHLSLYQLTIEEGTPLLRPAQGG 227


>gi|115933434|ref|XP_798402.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115960126|ref|XP_001188042.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 440

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 231/400 (57%), Gaps = 31/400 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN +V    + Q       + E Q + +L+G + ++SIFFGGGT
Sbjct: 35  LYVHWPYCQKRCTYCNFNKYVTP-TIDQNRIRACLVREAQTLIKLSGVKQVNSIFFGGGT 93

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL EP+ +  +++ + +   + ++VEI++EANP+SVE+   + ++ AGVNR+SLG+Q+L
Sbjct: 94  PSLAEPRVLEGVIEAVKELVAMPTDVEISMEANPTSVEMKKLEDFKSAGVNRLSLGIQAL 153

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +   L+ LGR H   +++  IH AR +FP R+S D+I+  P QT+  WE EL++ L    
Sbjct: 154 DSNDLKTLGREHTVGQSLTCIHEARKLFPDRLSIDIIFGRPSQTLNSWEAELEQILQVCD 213

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS-F 258
            H+SLYQLT+E GTL YK  + G L +P  ++  D+Y       +  G H YE+SN +  
Sbjct: 214 SHISLYQLTLEPGTLLYKFDQQGVLPMPDADLIADMYETAVERLAQAGFHRYEVSNFART 273

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK---------------HPES 303
           + AES+HN  YW    YIG+GPGAH R    + + A + +                 P++
Sbjct: 274 VRAESIHNKAYWEGKQYIGVGPGAHGRFVPITEQFADNADPSGKRGYSQEARIQTLEPDT 333

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL- 362
           W+  V K G A  ++  LS+     E L+ GLR R GIS + W+ L+  +    C R++ 
Sbjct: 334 WMLEVEKYGDATRKRIPLSNVDVLRELLLTGLRTRPGISDQTWQQLSPGD----CLRDVF 389

Query: 363 --------QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                    R+  +  +  + LRCT RG+ +LDS++ +L 
Sbjct: 390 GSSDFIKSARESGLMELDDAGLRCTHRGLNVLDSLLPDLT 429


>gi|261215309|ref|ZP_05929590.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|260916916|gb|EEX83777.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
          Length = 245

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 125/217 (57%), Positives = 162/217 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTP 236


>gi|329847437|ref|ZP_08262465.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
 gi|328842500|gb|EGF92069.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
          Length = 378

 Score =  285 bits (730), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 144/367 (39%), Positives = 228/367 (62%), Gaps = 11/367 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +YVHWP+C + CPYCDFN    R +  Q +   S L++++    L GPR++ S+FFGG
Sbjct: 7   IALYVHWPYCSRICPYCDFNVTRDRGQASQRSLFDSILSDLKSQSALLGPRTLVSLFFGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P   A ++    + +  + ++EIT+EANP+  E+  ++ +R AG+NR+SLGVQ
Sbjct: 67  GTPSLLPPDWTAELIATAKQLFPSTDDIEITLEANPTDAEIARYRAFRDAGINRLSLGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL++++L+FLGRNH+A EAI  I  A+++F R+S DLIYA P+QT   W  EL RA + +
Sbjct: 127 SLDDEALKFLGRNHSAREAITGIETAQSVFGRVSLDLIYARPEQTTHDWREELTRAAALS 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S YQLTIE+ T F +  + G    P +++A   Y  TQ         AYE+SNH+ 
Sbjct: 187 IEHISPYQLTIEQTTAFGRAVRRGRWSPPDQDLAEAFYFETQDTLERLNFDAYEVSNHAR 246

Query: 259 -LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK--NGHAV 315
            + A+++HN++ WR  DYIG+GPGAH R+ +   R A +     +++   V     GH  
Sbjct: 247 GINAQAMHNVHIWRGVDYIGVGPGAHGRLTIDGQRHATTALSELKAYTARVADIGVGH-- 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            E E L+  +  +E  M+GLR+ EG+++  +++L   +L ++    L   GF+E +  + 
Sbjct: 305 -ESETLTPLEAEEEAAMLGLRMAEGVALSRFKLL---DLPVKAA-PLIDGGFME-LTPTH 358

Query: 376 LRCTQRG 382
           LR T +G
Sbjct: 359 LRATPKG 365


>gi|114797411|ref|YP_761982.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hyphomonas neptunium ATCC 15444]
 gi|114737585|gb|ABI75710.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hyphomonas neptunium ATCC 15444]
          Length = 390

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 143/378 (37%), Positives = 221/378 (58%), Gaps = 4/378 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
            G+Y+HWP+C + CPYCDFN +  + +   +  + +   +++   R+L    ++ +++FG
Sbjct: 14  FGLYIHWPYCTRVCPYCDFNVYAAKDRA-TDPLVTAIADDIRVHRRKLPEHGALDTVYFG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P+ +A IL   ++ + +    EIT+EANP+ V   +    R+AGV R+S+GV
Sbjct: 73  GGTPALLRPEQVAEILKAASETFGIKDGAEITLEANPNDVLKADLLALRRAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+ + +L FLGR+H A     A+  A  +F  +S DLIYA P Q+   WE EL  AL+ 
Sbjct: 133 QSMRDSALAFLGRDHTAEAGGEAVKRALKVFDTISMDLIYARPGQSPANWEAELADALAL 192

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLSLY+LT E  T F K  + G++V   ++   DLY LTQ +T   G+ AYE+SNH+
Sbjct: 193 GAPHLSLYELTFEPATAFGKAAQRGEIVPMPDDAQADLYELTQQMTRDAGMPAYEVSNHA 252

Query: 258 FLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
              A +S HNL YWR GD+IG GPGAH RV V  +R A   E+ PE ++  ++       
Sbjct: 253 ASPAHQSRHNLIYWRGGDWIGAGPGAHGRVSVAGNRYATEAERRPEGYMAGMQMLQEGWA 312

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           +   L     A E L MGLR  EG+ ++  E+++G+ +  E       QG++ ++Q S L
Sbjct: 313 DAAKLPPLDIAREILAMGLRAAEGVDLRRVEIVSGKKVSREKIGVFTEQGWV-KLQGSEL 371

Query: 377 RCTQRGMTMLDSVIANLA 394
             T+ G  + D++ + LA
Sbjct: 372 SLTESGRLLADALTSQLA 389


>gi|224075262|ref|XP_002191317.1| PREDICTED: similar to Radical S-adenosyl methionine domain
           containing 1 [Taeniopygia guttata]
          Length = 455

 Score =  278 bits (712), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 151/385 (39%), Positives = 224/385 (58%), Gaps = 15/385 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C+K+C YC FN++V    V +       + E Q + +L+   S++S+FFGGGT
Sbjct: 47  LYVHWPYCLKRCSYCRFNTYVV-PAVDEAAVRACLVREAQALLRLSQVHSVTSVFFGGGT 105

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A    +    E+T+EANPSS   +   G+R AGVNRIS+GVQ+L
Sbjct: 106 PSLASPSTVAAVLEAVAGAAHLPPAAEVTLEANPSSTSASRLAGFRAAGVNRISIGVQAL 165

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H A+EA  A+  AR +FP R S DL++ LP Q+   W   L+ AL    
Sbjct: 166 DDAELRLLGREHTAAEARKAVEAARELFPGRTSIDLLFGLPGQSRDAWAQRLEAALGLCD 225

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+SLYQLT+E+GT      + G L  P +++  D+Y   +S+  A G   YE+SN +  
Sbjct: 226 DHISLYQLTLERGTALAAQVRSGALPAPPQDLLADMYQTARSVLVASGFRHYEVSNFARK 285

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHS----RVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           GA S HNL+YW+   YIG+GPGAH     R + G  R A      P +W++ V+  GH  
Sbjct: 286 GALSTHNLSYWQGDQYIGVGPGAHGRFVPRAEGGCSREARVQTLEPVAWMREVQSQGHGT 345

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-------ERNLQRQGFI 368
             +  LS  +Q +E L + LR  EGI+ + W   +   L ++         R LQ++G++
Sbjct: 346 RSRVVLSPLEQLEELLSLALRTDEGITHERWGHFS-PQLSLQAVFGQPGEARALQQEGWL 404

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
             +    LRCT  G+ +LDS++ +L
Sbjct: 405 V-LDSGGLRCTWAGLAVLDSLLPDL 428


>gi|83945044|ref|ZP_00957410.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Oceanicaulis alexandrii HTCC2633]
 gi|83851826|gb|EAP89681.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Oceanicaulis alexandrii HTCC2633]
          Length = 386

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 221/380 (58%), Gaps = 12/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVHWP+C + CPYCDFN + +      E  + + L ++   R   G R + S+ FGG
Sbjct: 8   LGLYVHWPYCARICPYCDFNVY-KAAHAQPEALLDAMLRDLAHWRARLGARPVHSVHFGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  IA IL+     + ++   EI +EANP  +E   F+G   AGV R+SLGVQ
Sbjct: 67  GTPSLMEPSAIAAILEQADALFGLAPGAEIGLEANP--MEHERFEGIATAGVERLSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL+ LGR+H+A   + A+  A+++F  +S DLIYA   QT   W  EL+ AL + 
Sbjct: 125 ALDDDSLKALGRDHDARTGLQALECAQSLFKHVSLDLIYARENQTPEGWRAELETALGFG 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLYQLTIE GT F +  K G L  P ++ A D+Y LTQ + ++ GL +YEISNH+ 
Sbjct: 185 TGHMSLYQLTIEPGTAFARKLKRGALTPPPDDAAADMYALTQDVCASAGLPSYEISNHAR 244

Query: 259 LGAE-SLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAISIEKHPESWLKMV-RKNGHA 314
             A+ S+HN  YW   D+IGIGPGAHSRV       R   +  + PE +++ V   +GH 
Sbjct: 245 SAADQSVHNRLYWEGEDWIGIGPGAHSRVGAHASGGRGGAAAHRRPEHYMEGVLSGDGH- 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLR-EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
             E+E L +E +  E L+MG+RL   G+ V     L G + D +    +  QG I +   
Sbjct: 304 --ERETLDAEAEFIERLLMGIRLTGSGLDVARLHALTGLSPDAQGLARMTAQGLI-KAGD 360

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           S L  T+RG    D V   L
Sbjct: 361 SALVLTERGRAFADHVAETL 380


>gi|163737988|ref|ZP_02145404.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Phaeobacter gallaeciensis BS107]
 gi|161388604|gb|EDQ12957.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Phaeobacter gallaeciensis BS107]
          Length = 312

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/313 (46%), Positives = 200/313 (63%), Gaps = 3/313 (0%)

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + P  +A I++   + W  S+++EI++EANP+SVE   F GYR AGVNRIS+G+Q+L + 
Sbjct: 1   MHPDTVATIIETAREIWPFSNDIEISLEANPTSVEAGRFTGYRDAGVNRISMGIQALNDG 60

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L  LGR H+ SEA  A  +AR  F R+SFDLIYA   QT+  W+ EL +ALS A+DHLS
Sbjct: 61  DLHRLGRMHSVSEAQNAFDVARKCFDRVSFDLIYARQGQTLVGWQQELDQALSMAIDHLS 120

Query: 204 LYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           LYQLTIE+GT F   +  G L  LPS++ A D+Y  TQ I   HGL AYE+SNH+  GAE
Sbjct: 121 LYQLTIEEGTAFGDRYARGKLRDLPSDDNAADMYLTTQEICDKHGLPAYEVSNHARPGAE 180

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLS 322
           S HNL YWRYGDY+GIGPGAH R+ +   R A      P +WL    +N      +  L+
Sbjct: 181 SRHNLIYWRYGDYLGIGPGAHGRLTLDGTRYATETYLQPGAWLAAA-ENHTGECSRIPLT 239

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
            E  + E+LMMG+RL EG+ +  +  ++GR L  E   NL+  G +E +  +R++ T  G
Sbjct: 240 PEDASAEYLMMGMRLVEGLDLDRFRAISGRTLSSERISNLREIGMVE-LSDNRIQATDAG 298

Query: 383 MTMLDSVIANLAV 395
             +L++V+ +L V
Sbjct: 299 RAVLNAVLRDLLV 311


>gi|329896511|ref|ZP_08271569.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
 gi|328921728|gb|EGG29101.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
          Length = 380

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 153/379 (40%), Positives = 219/379 (57%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H+P+C +KCPYCDFNSHV    + +   + + + +     ++ G R I S+F GGG
Sbjct: 8   GLYIHFPWCERKCPYCDFNSHVSGQALPEAEMVTALINDYTSDLEIYGARPIDSLFIGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSLI  Q+IA +LDGI +   +S   EIT+EANP S E   F GYR AGVNR+S+G+QS
Sbjct: 68  TPSLISAQSIARLLDGIDRLTPLSDTTEITMEANPGSSEQEKFAGYRAAGVNRLSIGIQS 127

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LR LGR H+  EA  AI  A+   F R++ DL+Y LP QT+ Q   ++++ LSY 
Sbjct: 128 FNSEHLRRLGRIHSRDEADHAIKAAQAAGFERINIDLMYGLPDQTLKQALHDVEQGLSYN 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS YQLTIE  T+FYK        LP ++   D+ +  +   +  GL  YE+S  + 
Sbjct: 188 TGHLSWYQLTIEPNTVFYKQRPP----LPDDDAIADIADEGEHFMTQSGLKRYEVSAFAG 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HN+NYWR+GDY GIG GAH ++    H +  + ++ P+S+L+   +     VE 
Sbjct: 244 TGQECRHNVNYWRFGDYFGIGAGAHGKISFNDHIIRTAKQRMPDSYLQASDRASRLAVES 303

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE----RNLQRQGFIERVQFS 374
             L   Q   EF++  LRLREG+ +  ++   G  L  EC     R LQ QG +      
Sbjct: 304 A-LDQAQLISEFMLNALRLREGVEIALFQRSTG--LAPECMHHTWRRLQAQGLMVEGD-D 359

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RL+ T+ G   L++VI + 
Sbjct: 360 RLQTTELGWRFLNTVIESF 378


>gi|197106936|ref|YP_002132313.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
 gi|196480356|gb|ACG79884.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
          Length = 380

 Score =  275 bits (703), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 151/379 (39%), Positives = 220/379 (58%), Gaps = 12/379 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISSIF 75
             +GVYVHWP+C + CPYCDFN +  R +  +   + S  + +++    LTGPR + S+F
Sbjct: 10  GPVGVYVHWPYCARICPYCDFNVYRARGREAEARALASAIIADLRAQAALTGPRELVSVF 69

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P     I+    + W+ ++++E+++EANP+  E + F  +  AGVNR+SL
Sbjct: 70  FGGGTPSLMDPAWAGEIVAEAKRLWSPAADLEVSLEANPTDAEADRFAAFADAGVNRLSL 129

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L++++L+ LGRNH A E   A   A   FPR+S DLIYA P QT   W  EL  AL
Sbjct: 130 GLQALDDEALKLLGRNHGAEEGRRAARAAARAFPRLSVDLIYARPGQTPQAWAGELAAAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S YQLTIE GT F +  + G +V P+E  A +L+  TQ++  A G  AYE+SN
Sbjct: 190 DLGPEHVSPYQLTIEAGTAFDRAVRRGTIVPPAEEPAAELFETTQAVLEAAGFDAYEVSN 249

Query: 256 HS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           H+    A S HNL YW+  DY+G+GPGAH R+     R+A      P  +++       A
Sbjct: 250 HARGEAARSRHNLVYWQGLDYVGVGPGAHGRITTPEGRLATFAAPRPADYIE------GA 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +E L+  + A+E L+ GLR+ EG+   +   LA     I    +L   G +     S
Sbjct: 304 GGSRERLTPVEAAEERLLGGLRIAEGVGRDEIAALALPEGRIA---HLVELGLLAD-DPS 359

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RLR T  G  +LD+V   L
Sbjct: 360 RLRATAEGRRLLDAVTRAL 378


>gi|196016273|ref|XP_002117990.1| hypothetical protein TRIADDRAFT_13916 [Trichoplax adhaerens]
 gi|190579463|gb|EDV19558.1| hypothetical protein TRIADDRAFT_13916 [Trichoplax adhaerens]
          Length = 343

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 212/339 (62%), Gaps = 5/339 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           VY+HWP+C K C YC+FN  V++  V  +   +  +  ++ + QL   +++ SI+FGGGT
Sbjct: 1   VYIHWPYCKKHCHYCNFNKVVQQL-VDHDRMTECMIRAVKGLLQLGHVKTVKSIYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL +P NI  ++  I++  T+  ++EIT+EANP+S E+     +++AG+NR+SLG+Q+L
Sbjct: 60  PSLCKPDNIQRMISAISQCATLGDDIEITMEANPTSTEMEKMGHFKQAGINRLSLGIQAL 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ LGR+H+A++A  AI +A+  FP R S DLI+A P QT+ +W  EL++A+S   
Sbjct: 120 NDKDLQILGRDHDAAQAKQAIDIAKAHFPKRTSIDLIFARPNQTIPEWSTELEKAISMCD 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+SLYQLT+E+GT  +K  +   L LP E++   +Y    +    +G   YE+SN +  
Sbjct: 180 NHVSLYQLTLERGTKLHKQVQQQSLHLPDEDIIAQMYENAINTMRRYGYQRYEVSNFAKQ 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGS---HRVAISIEKHPESWLKMVRKNGHAVV 316
           GA S HNL+YW   DYIG+GPGAH R+ + S    R A+     P  W+ MV +    + 
Sbjct: 240 GAISQHNLSYWTSNDYIGVGPGAHGRLIIPSLEYQRYAMIQCLSPNHWMTMVEQGKLGIQ 299

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           + +  S  ++  E +++G+R   GIS K W+ +A   L+
Sbjct: 300 KMQKQSEMERLTELILLGMRTPAGISRKRWDSIASPKLE 338


>gi|327265063|ref|XP_003217328.1| PREDICTED: MYCBP-associated protein-like [Anolis carolinensis]
          Length = 1025

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 206/336 (61%), Gaps = 6/336 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+HWP+C K+C YC+FN ++ R  + +       + E + + Q +  + I+S++FGGG
Sbjct: 94  ALYLHWPYCEKRCSYCNFNKYIPR-NIDESRMRNCLIQEARTLIQFSQVQRITSVYFGGG 152

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  IA +LD I+++  V+   EIT+EANP+S +      ++KAGVNR+S+G+QS
Sbjct: 153 TPSLASPLTIAAVLDAISRDVFVAEGTEITLEANPTSADALCLAEFQKAGVNRLSVGIQS 212

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L +  L+ LGRNH+A EA+  +  A+ +FP R+S DLI+ LP QT   W  +L+  L+  
Sbjct: 213 LNDAELQLLGRNHSAYEALRTLEEAKKLFPGRISVDLIFGLPDQTTASWVQDLEALLAMC 272

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQLT+E+GT  +K    G L LP  ++  ++Y   ++I    G H YE+SN + 
Sbjct: 273 DDHISLYQLTLERGTSLFKQVHQGFLPLPDPDIVSEMYECARNILQNAGFHQYEVSNFAR 332

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGS---HRVAISIEKHPESWLKMVRKNGHA 314
            GA S HNL+YWR   YIG+GPGAH R V  G+   +R A      P+ W+K V   GH 
Sbjct: 333 NGALSTHNLSYWRGSQYIGVGPGAHGRFVPWGNGKVYREARIQTLEPDIWMKEVLAFGHG 392

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             ++  L+  +  +E LM+GLR+  GI+ + W   A
Sbjct: 393 TRKQTPLTRLEILEEVLMLGLRMDVGITHQHWLQFA 428


>gi|303258093|ref|ZP_07344101.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
 gi|302859112|gb|EFL82195.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
          Length = 379

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 135/375 (36%), Positives = 209/375 (55%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+HWP+C+KKCPYCDFNSH  R    +  +  + +  ++          + SIFFG
Sbjct: 5   PLSLYIHWPWCLKKCPYCDFNSHGLRGPAPEALYEAAIIEGLKEQGARVQRGKLKSIFFG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ I  I++    N     N+EIT+EANP + E   F+ +R+AGVNR+S+G+
Sbjct: 65  GGTPSLMAPETIGRIIEAADNNIPFHENIEITLEANPGTFEEQKFKDFREAGVNRLSIGI 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  LR LGR HN+ EA  A   A  IF   + DL++ LP QT+ + + EL+ A S+
Sbjct: 125 QSFDDAKLRALGRVHNSQEARRAAESAGKIFENFNLDLMFGLPGQTIQELDEELETAFSF 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLT+E  T F K    G   +P ++V  D+ +L +  T+A G   YE+S ++
Sbjct: 185 GSTHLSCYQLTLEPNTYFAKFPPKG---IPDDDVLSDMSDLVRDKTAARGFDHYEVSAYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNLNYW +GDY  +GPGAH ++ +          + P  WL   +++   + E
Sbjct: 242 KGGYRCRHNLNYWEFGDYFAVGPGAHGKITIQGRPERFYNYRDPARWLLSFKEHQTQIAE 301

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
           ++ +  E    EF++  LRLREG+    +    G + D+       L+ +G +      R
Sbjct: 302 RKLIDPEDLPFEFMLNALRLREGVPFDFYTERTGLDFDVIESIWTELREKGLVCD-HLKR 360

Query: 376 LRCTQRGMTMLDSVI 390
           ++ T++G   L+ V+
Sbjct: 361 IKTTEKGWLFLNEVL 375


>gi|254437746|ref|ZP_05051240.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 307]
 gi|198253192|gb|EDY77506.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 307]
          Length = 350

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 222/355 (62%), Gaps = 18/355 (5%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           V Q  +  +F  E+  + +LT  R ++S+FFGGGTPSL++ + +  IL  + K W ++++
Sbjct: 4   VDQTRWAAAFEKEIDRVAELTSDRVLNSVFFGGGTPSLMDVETVDRILARVQKRWRLAND 63

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +E+T+EANP+S+E   F GYR  GVNR+S+GVQ+L +  LR LGR H+A EA+AA+ +AR
Sbjct: 64  LEVTLEANPTSIEAQRFTGYRDVGVNRVSVGVQALNDTDLRALGRLHSADEALAAVEIAR 123

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             F R+SFDLIYA   QT+ +W+ EL RAL    DHLSLYQLT+E GT F    K G L 
Sbjct: 124 TTFDRVSFDLIYARQNQTVGEWQSELTRALELEPDHLSLYQLTVEDGTSFGDRFKRGLLR 183

Query: 226 -LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            LP+E++  DL+++TQ+     GL AYE+SNH+  G ES HNL YWR GD+ GIGPGAH 
Sbjct: 184 GLPNEDLGADLWDVTQNACVKAGLPAYEVSNHAKRGQESRHNLIYWRSGDWAGIGPGAHG 243

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKN------GHAVVEKEFLSSEQQADEFLMMGLRLR 338
           R+ +   R      K P  W+  V         G A+V+ + L      +E ++MGLR+ 
Sbjct: 244 RLTLDGIRHETVCVKSPGGWIAQVESGALGLDVGTALVKADIL------EERVIMGLRVV 297

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +GI +   E +A +   I    +L   G ++ ++ S+L  T +G  +L++VI++L
Sbjct: 298 DGIEMPA-EWIANKLNKIN---DLVDLGHLKNIK-SKLNVTVQGRPVLNAVISHL 347


>gi|304320168|ref|YP_003853811.1| coproporphyrinogen III oxidase [Parvularcula bermudensis HTCC2503]
 gi|303299071|gb|ADM08670.1| coproporphyrinogen III oxidase [Parvularcula bermudensis HTCC2503]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/375 (39%), Positives = 212/375 (56%), Gaps = 12/375 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+HWPFC + CPYCDF    R   V ++ +I +FL ++       G R I S++FGGG
Sbjct: 6   GLYLHWPFCDRICPYCDFVV-ARGRDVDEKAWISAFLADLDDSAARWGRRQIVSVYFGGG 64

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P  +  +L GIA  + ++S+ E+TIE NP+++E    + YR  G+NR+S+GVQS
Sbjct: 65  TPSLLSPHGLNRLLGGIADRYDLASSAEVTIEVNPTALEAQRLRAYRALGINRVSIGVQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +++ LRFLGRNH+   A   I  A  +F R++ D IYALP +T+  W   L+  LS  V
Sbjct: 125 FDDEHLRFLGRNHDGGTARGVIDQAAALFDRVTADFIYALPGETIEDWTRRLRAILSLPV 184

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLYQLTIE+GT F      G     S+ +A DLY  T   T A G+ AYEIS+H+  
Sbjct: 185 SHLSLYQLTIEQGTAFGLQVDKGRWTPASDAMAADLYQATLEETMAAGMPAYEISSHARP 244

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E++HN  YW  GD+IGIGPGAH R+     R+A +      ++      +    VE+ 
Sbjct: 245 GHEAVHNRLYWMEGDWIGIGPGAHGRITHQGQRIATAPRVPIRAYCSTPPAD---RVERA 301

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF-IERVQFSRLRC 378
            L+  +   E L  GLR  +G++  D   L    L+     +  R+G+ I R    R+  
Sbjct: 302 PLTPSEMRVERLAGGLRTLDGVATSDLSFLPPERLE-----DFLREGWLIPRAD--RMTI 354

Query: 379 TQRGMTMLDSVIANL 393
            +    + D +IA L
Sbjct: 355 PRTHWILADGLIARL 369


>gi|156254826|gb|ABU62824.1| radical S-adenosyl methionine domain containing 1 [Danio rerio]
          Length = 444

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 218/390 (55%), Gaps = 25/390 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C+K+C YC+FN ++ R +   +   +    E + + +L+    I+S+FFGGGT
Sbjct: 46  LYVHWPYCLKRCSYCNFNKYILRSE-NHDTMTECLQKETETLLKLSQVSRITSVFFGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL +   IA +L+ + KN  +S   E+T+E NP+       + +  AGVNR S+GVQSL
Sbjct: 105 PSLAQSSTIAAVLETVTKNSNLSDLAEVTLEVNPTPAGKARLKDFTLAGVNRFSIGVQSL 164

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               LR LGR+H+   A+  +  AR + P R+S D+++ALP Q+++ W+ +L+  L    
Sbjct: 165 NADHLRILGRDHSVQHALQTVSKARKLCPGRVSVDIMFALPGQSVSCWQKQLEELLYVCD 224

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+SLYQLT+E+GT  +K  + G L +P + V   +Y     +    G H YE+SN +  
Sbjct: 225 DHISLYQLTLERGTQLFKQVESGKLSVPGDEVTAVMYKTACRVLEESGFHQYEVSNFARN 284

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            A S HN+ YWR   YIG+GPGAH R       G  R A +    P+ W+K V+  G   
Sbjct: 285 NAVSEHNMGYWRGHQYIGVGPGAHGRFVPHGDGGVQREARTQTLEPDVWIKEVQSRGQGT 344

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ----RQGFIERV 371
             +  L   Q  +E L+MGLR+ EGI+ + WE+ +        E NLQ    +   I+ +
Sbjct: 345 RRRITLHHLQLLEEVLVMGLRMNEGITHQHWELFSP-------EANLQQVFGKSANIQEL 397

Query: 372 QFSR--------LRCTQRGMTMLDSVIANL 393
           Q  R        LRC+  G+ +LDS++  +
Sbjct: 398 QGGRFLILDDRGLRCSWEGLVLLDSILPTI 427


>gi|134133302|ref|NP_001077026.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Danio rerio]
 gi|187611409|sp|A4IGH2|RSAD1_DANRE RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|134026346|gb|AAI35100.1| Rsad1 protein [Danio rerio]
          Length = 444

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/390 (36%), Positives = 219/390 (56%), Gaps = 25/390 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C+K+C YC+FN ++ R +   +   +    E + + +L+    I+S+FFGGGT
Sbjct: 46  LYVHWPYCLKRCSYCNFNKYISRSE-NHDTMTECLQKETETLLKLSQVSRITSVFFGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL +P  IA +L+ + KN  +S   E+T+E NP+       + +  AGVNR S+GVQSL
Sbjct: 105 PSLAQPSTIAAVLETVTKNSNLSDLAEVTLEVNPTPAGKARLKDFTLAGVNRFSIGVQSL 164

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               LR LGR+H+   A+  +  AR + P R+S D+++ALP Q+++ W+ +L+  L    
Sbjct: 165 NADHLRILGRDHSVQHALQTVSEARKLCPGRVSVDIMFALPGQSVSCWQKQLEELLYVCD 224

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+SLYQLT+E+GT  +K  + G L +P + V   +Y     +    G H YE+SN +  
Sbjct: 225 DHISLYQLTLERGTQLFKQVESGKLSVPGDEVTAIMYKTACRVLEESGFHQYEVSNFARN 284

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            A S HN+ YWR   YIG+GPGAH R       G  R A +    P+ W+K V+  G   
Sbjct: 285 NAVSEHNMGYWRGHQYIGVGPGAHGRFVPHGDGGVQREARTQTLEPDVWIKEVQSRGRGT 344

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ----RQGFIERV 371
             +  L   Q  +E L+MGLR+ EGI+ + WE+ +        E NLQ    +   I+ +
Sbjct: 345 RRRITLHHLQLLEEVLVMGLRMNEGITHQHWELFSP-------EANLQQVFGKSANIQEL 397

Query: 372 QFSR--------LRCTQRGMTMLDSVIANL 393
           Q  R        LRC+  G+ +LDS++  +
Sbjct: 398 QGGRFLILDDRGLRCSWEGLVLLDSILPTI 427


>gi|156395073|ref|XP_001636936.1| predicted protein [Nematostella vectensis]
 gi|156224044|gb|EDO44873.1| predicted protein [Nematostella vectensis]
          Length = 394

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 141/391 (36%), Positives = 229/391 (58%), Gaps = 26/391 (6%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C   C +C+FN +VR + +  E   +  + E + + +++G ++I+S++FGGGTPSL 
Sbjct: 1   WPYCKSLCSFCNFNKYVREF-IDHERMKKCLVKECKSLLEISGAKTINSVYFGGGTPSLA 59

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +P   + IL+ + +   ++ N E+T+EANP+S E +  + ++ AG+NR+SLGVQSL E  
Sbjct: 60  KPSTFSAILECLQQKGVLNPNAEVTLEANPTSAESHKLRDFKTAGINRLSLGVQSLSEDE 119

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  LGR  +  E++ ++ +A+ +FP R+S DL++  PKQT  +WE EL+  L    +H+S
Sbjct: 120 LAVLGRQGSCLESLKSLDMAKVLFPGRVSVDLMFGRPKQTAPEWERELEEILPLCDNHIS 179

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +YQLT+ +GT  ++  ++G LV+P  +   DLY  T  +    G + YE+SN +  G ES
Sbjct: 180 IYQLTLHRGTSLFRQVQEGKLVVPDSDQMADLYLTTVDVLEKAGFYQYEVSNFAKPGCES 239

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGS------HRVAISIEKHPESWLKMVRKNGHAVVE 317
            HNL+YWR   YIGIGPGAH R    S       RVA      P SW+K V + GH   +
Sbjct: 240 QHNLSYWRGVPYIGIGPGAHGRFYEMSDKDSKMKRVAWVQTLEPNSWMKEVEEFGHGTRK 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDW-------------EMLAGRNLDIECERNLQR 364
           K F S+    +E +M+GLR  EGI  + +             E+  G + D+   R+   
Sbjct: 300 KVFQSNAVILEEIIMLGLRTSEGIPNERFNHYITATSSGSLREIFEGCS-DV---RDFMA 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G ++ +    LR T  G+ ++D++ A++A+
Sbjct: 356 EGLLQ-LDERGLRATPSGLAVVDTLTASIAL 385


>gi|114571550|ref|YP_758230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Maricaulis maris MCS10]
 gi|114342012|gb|ABI67292.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Maricaulis maris MCS10]
          Length = 389

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 151/388 (38%), Positives = 216/388 (55%), Gaps = 14/388 (3%)

Query: 11  MTGQG----SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           MTG G     N+LG+Y+HWP+C + CPYCDFN  V R K   E  + + L +M   R  T
Sbjct: 1   MTGTGDRQLGNALGLYLHWPYCARICPYCDFN--VYRPKGDDEALLSAILADMADWRDKT 58

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G R ++S+ FGGGTPSL++P  IA ++D     W      EI +EANP+  +   F    
Sbjct: 59  GGRRLASLHFGGGTPSLMKPDWIARVIDAADSLWGFEDGAEIGLEANPA--DRARFAAIG 116

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           K GV R+SLGVQS +++ L  LGR+H+ ++A  AI  A + F R+S D+IYA   QT   
Sbjct: 117 KVGVARLSLGVQSFDDRVLAALGRDHDGAQARQAIEAALSAFERVSVDMIYAQSGQTNDA 176

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ EL  AL+    H+S YQLTIE GT F K  + G+ +    + A  LY  TQ++ ++ 
Sbjct: 177 WKRELGEALTSGAGHVSAYQLTIEPGTAFGKRSERGETLAVDGDGAAVLYEATQTLCASQ 236

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPES 303
           G  AYE+SNH+   A+ S+HN  YW  GD+IG+GPGAH R+   +   RVA +  + P  
Sbjct: 237 GFPAYEVSNHARSPADQSVHNRIYWEGGDWIGVGPGAHGRLGQSTLDGRVATTACRRPID 296

Query: 304 WLKMVRKNGHAVVEK--EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           ++  V   G  V     E L+      E   +GLR+ +G+ +       G  L+ E    
Sbjct: 297 YITAVNTTGSGVGADGTERLAPGDDLVERAFLGLRVTDGLDLDHLHRTTGVALNAEAIDR 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +   GF++R    RLR T++G  + D V
Sbjct: 357 MIGDGFLQRAGV-RLRLTEQGRLLADRV 383


>gi|91787237|ref|YP_548189.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas sp. JS666]
 gi|91696462|gb|ABE43291.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas sp. JS666]
          Length = 394

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/375 (36%), Positives = 225/375 (60%), Gaps = 12/375 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+C+KKCPYCDFNSH    ++ ++ ++ + + +++    L   R++ SIF GG
Sbjct: 21  LSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIADLEAALPLVWGRTVHSIFIGG 80

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  PQ I  +L  I     + ++ EIT+EANP + E + F+ +R AGV R+S+GVQ
Sbjct: 81  GTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFKAFRSAGVTRLSVGVQ 140

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L+ LGR H+ ++AIAA+  A   F   + D++YALP QT+     ++++AL+  
Sbjct: 141 SFDDRHLKALGRVHDRAQAIAAVEEAAQAFDTFNLDIMYALPGQTLDNLAQDMRQALALQ 200

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F K        +P E++A  + +    +T   GL  YE+S ++ 
Sbjct: 201 PPHISIYHLTIEPNTYFAKFPP----AIPEEDMAYAMLDKITEMTEGAGLQRYEVSAYAR 256

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVE 317
            G +  HNLNYW++GDY+GIG GAH ++   +HRV   +  + P+ +++     G AV +
Sbjct: 257 AGHQCFHNLNYWQFGDYLGIGAGAHGKLSF-AHRVVRQVRYRDPKLYMEKALA-GDAVTQ 314

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
           +  +S  +   EF++  LRLREG  ++D+    G  L    ++ L   +R+G +ER  F 
Sbjct: 315 ETEVSRTELPFEFMLNALRLREGFKLQDFCDKTGLPL-TAIQQGLEEGERKGLLER-DFV 372

Query: 375 RLRCTQRGMTMLDSV 389
           R++ T+RG   L+ +
Sbjct: 373 RVKPTERGFDFLNDL 387


>gi|319786146|ref|YP_004145621.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464658|gb|ADV26390.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 384

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 207/337 (61%), Gaps = 7/337 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  R ++  ++++ + + +++    L   R++ S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHGARGELPFDDYVAALVRDLEHDLPLVWGRTVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I  IL   +     + + EIT+EANP + E + F+GYR AGVNRIS G+
Sbjct: 68  GGTPSLFPAAAIEAILSAASARLRFAPDAEITLEANPGTAEHDRFEGYRAAGVNRISFGI 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR H++ EA AA+ LA++  F  ++ DL+YALP Q +   E +L+RA +
Sbjct: 128 QSFDDGCLQRLGRIHDSREAEAAVKLAQDAGFDNLNLDLMYALPGQDLAMAERDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T+FY     G   +P +++A D+    Q++ +  G   YE S +
Sbjct: 188 LQPAHISHYQLTLEPNTVFYARPPQG---IPDDDLAWDIQEHCQALLAGAGYGHYETSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS--IEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWRYGDY+GIG GAH ++ +G+ +  +     KHP +W+     +  A
Sbjct: 245 ARPGRQCAHNLNYWRYGDYLGIGAGAHGKITLGAEQAILRRWKHKHPATWMAAAGTD-QA 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   + ++  Q+  E+++  LRL EG ++ D+E+  G
Sbjct: 304 IGGNDRIAPAQRPFEYMLNALRLHEGFALADFEVRTG 340


>gi|89900421|ref|YP_522892.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodoferax ferrireducens T118]
 gi|89345158|gb|ABD69361.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodoferax ferrireducens T118]
          Length = 394

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 206/328 (62%), Gaps = 8/328 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +YVH P+C+KKCPYCDFNSH +R  ++ ++ ++ + + +++    LT  R++ SIF G
Sbjct: 18  LSLYVHLPWCLKKCPYCDFNSHEMRAAELPEQRYLAALMADLEAALPLTWGRTVHSIFIG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I  +L GI     + +  EIT+EANP S E + F+ +R AGV R+S+GV
Sbjct: 78  GGTPSLFSPEAIDHLLSGIRARLRLEAGCEITLEANPGSFEKDRFRAFRGAGVTRLSVGV 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L+ LGR H++++A+AA+  A   F   + DL+YALP QT+   + ++ RAL++
Sbjct: 138 QSFNDSFLKTLGRVHDSAQALAAVEEAAQAFDTFNLDLMYALPGQTLADVKQDMARALTF 197

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  H+S+YQLTIE  T F K        LP ++ A D+ +L   +T + GL  YE+S ++
Sbjct: 198 SPPHISIYQLTIEPNTFFAKYPPP----LPEDDTAYDMLDLITDMTGSAGLQRYEVSAYA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G    HNLNYW++GDY+G+G GAHS++   +HRV   +  + P  +++     GH + 
Sbjct: 254 APGHRCFHNLNYWQFGDYLGLGAGAHSKLSF-AHRVVRQVRFREPGRYMEQALA-GHCLA 311

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVK 344
           + E +S      EF++  LRL++G +++
Sbjct: 312 QDEEVSRADLPFEFMLNALRLKDGFALQ 339


>gi|319778260|ref|YP_004129173.1| Radical SAM family enzyme,coproporphyrinogen III oxidase like
           protein [Taylorella equigenitalis MCE9]
 gi|317108284|gb|ADU91030.1| Radical SAM family enzyme,coproporphyrinogen III oxidase like
           protein [Taylorella equigenitalis MCE9]
          Length = 394

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/341 (37%), Positives = 205/341 (60%), Gaps = 6/341 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +Y+H P+C++KCPYCDFNSH     ++ +E ++++   ++ +       RSI S+F G
Sbjct: 17  LSIYIHTPWCIRKCPYCDFNSHETTEIELPEEQYLKALEEDLIYNLPHIWGRSIISVFIG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++  + I  IL  +     +SS +EIT+EANP++ E   F  YR +G+NR+S+G+
Sbjct: 77  GGTPSILSTKTIDRILQILRNLLNISSEIEITLEANPATFESEKFAAYRSSGINRLSIGI 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   ++L+ LGR H++  AI A  +A+  F   + D++YALP Q++ + E ++  AL  
Sbjct: 137 QSFNNKNLQALGRVHDSQSAINACEIAKKFFDNFNLDIMYALPDQSLKECEEDIILALQL 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLSLYQLT+E  TLF K       +LPSE+  +D+  +   +T+  G   YEIS ++
Sbjct: 197 ESKHLSLYQLTLEPNTLFSKFPPK---ILPSEDEIIDMEEMIHELTALRGFKRYEISAYA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKNGHAV 315
             G + +HN NYW +GDY+GIGPGAHS++      +    EKHP  W+K  M  + G  +
Sbjct: 254 LDGWQCIHNRNYWEFGDYVGIGPGAHSKISFPDKIIREVREKHPIKWIKKCMSDQKGAQI 313

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           +E   L  E+   EF++  LRL++G+    +E   G ++ +
Sbjct: 314 IEHRELKVEELPFEFMLNALRLKDGVPTNYFEERCGVSMAV 354


>gi|319942265|ref|ZP_08016580.1| coproporphyrinogen oxidase [Sutterella wadsworthensis 3_1_45B]
 gi|319804138|gb|EFW01038.1| coproporphyrinogen oxidase [Sutterella wadsworthensis 3_1_45B]
          Length = 401

 Score =  266 bits (679), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/386 (37%), Positives = 214/386 (55%), Gaps = 20/386 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQ-WMRQLT--GPRS 70
           L +Y+HWP+CV+KCPYCDFNSH            +  +    L +++ W RQ      R 
Sbjct: 16  LSIYLHWPWCVRKCPYCDFNSHRLPASTADRLAFESAYAAGVLQDLEAWCRQAPEIADRP 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SIF GGGTPSL+  + +  +L GI   + ++ + EIT+EANP + E   F+ +R AGV
Sbjct: 76  IVSIFVGGGTPSLMSGETVERLLTGIRSRFRLTEDCEITMEANPGTAESEKFKAFRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+GVQS  ++ LR LGR H A +A AAI +AR  F   + DL+YALP +++   +ME
Sbjct: 136 NRLSIGVQSFSDEKLRRLGRIHTADDARAAIDMARRSFENFNLDLMYALPGESIADLQME 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  ALS    HLS YQLTIE GT F K   +    LP  +   ++ ++ ++I +  G   
Sbjct: 196 LAEALSSGATHLSCYQLTIEPGTAFEKRLPED---LPDLDETAEMGDVVEAILAQAGYTR 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV----GSHRVAISIEKHPESWLK 306
           YE+S ++  G +  HNLNYW +GDY+  GPGAH ++ V    G   +  +   +P  WL+
Sbjct: 253 YEVSGYAQPGRQCRHNLNYWMFGDYLAAGPGAHGKLSVVNAEGFSILREARRVNPRKWLE 312

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQ 363
            +   G    E  F+  E +  EF++  LRL  G+    +   +G  L+    + ER L+
Sbjct: 313 ALEATGSGAEESHFVPPEDRPFEFMLNALRLLNGVPASLYAERSGLPLESILPQLER-LR 371

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSV 389
           R G +      R+  T+RG+  L  V
Sbjct: 372 RDGLLS-ADPDRIAPTRRGLDFLSDV 396


>gi|301620523|ref|XP_002939612.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 438

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 141/336 (41%), Positives = 198/336 (58%), Gaps = 8/336 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGG 78
            +YVHWP+C K+C YC+FN ++ R     E  I+S L  E + + +L+    I+S+FFGG
Sbjct: 40  ALYVHWPYCEKRCTYCNFNKYIPRSD--NEAAIRSCLVQEARTLIRLSQVHRITSVFFGG 97

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL     IA +L+ +++   +  + EIT+EANP+S E +  Q ++KAGVNR+S+GVQ
Sbjct: 98  GTPSLASHGTIAAVLEAVSQTALLPQDAEITLEANPTSAERSRLQQFQKAGVNRLSVGVQ 157

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++Q L  LGR H+ SEA   +  A N+FP R S D+I+ LP Q++  W   L++ L  
Sbjct: 158 SLDDQELLLLGRTHSTSEAQKTLEEACNLFPGRTSVDIIFGLPGQSLASWHRTLRQLLDI 217

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DH+SLYQLT+E+GT  +KM +DG L  P   VA  +Y   +   S  G   YE+SN +
Sbjct: 218 CDDHVSLYQLTLERGTSLFKMVQDGRLSTPDMEVASQMYEDARRTLSESGFRQYEVSNFA 277

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGH 313
             GA S HN++YW    YIGIGPGAHSR       G  R A      PE W+K V   GH
Sbjct: 278 RNGALSAHNMSYWLGKQYIGIGPGAHSRFVPRGSGGQQRQARIQTLEPEPWMKEVMHYGH 337

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
              +   L+      E L+ GLR   GI+ + W+ +
Sbjct: 338 GTRKVTELNDLDVLSETLVQGLRTDIGITHERWQQI 373


>gi|188990326|ref|YP_001902336.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732086|emb|CAP50278.1| putative coproporphyrinogen dehydrogenase [Xanthomonas campestris
           pv. campestris]
          Length = 385

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 141/379 (37%), Positives = 217/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  ++++ + + ++     L   R + S+FFG
Sbjct: 8   PLALYVHLPWCVRKCPYCDFNSHAAKGALPFDDYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   A     + N+EIT+E NP + E   F GYR AGVNR+S GV
Sbjct: 68  GGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFDGYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QSFDDAALQRLGRIHDSAEAERAIKLAQDAGCDNFNIDLMYALPEQTLAQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +A G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPQG---IPDDDDAWDMQEHCQRLLAAAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS--IEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+ +  +     KHP+S+L        A
Sbjct: 245 ARPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEQQVLRRWKHKHPQSYLASAGSTA-A 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERV 371
           +   E + + +   E+++  LRL EG  + D+E   G   + L     R + +   +E  
Sbjct: 304 IGGDEHVPAARLPFEYMLNLLRLHEGFRLSDFEACTGLPAQVLQAPLARAMAQGWLVE-- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QHGRIVPTELGRRFTNDVV 380


>gi|120612224|ref|YP_971902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax citrulli AAC00-1]
 gi|120590688|gb|ABM34128.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax citrulli AAC00-1]
          Length = 390

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 221/377 (58%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +YVH P+C+KKCPYCDFNSH  R   G   ++ ++ + + +++    L   R++ S+F
Sbjct: 14  LSLYVHLPWCLKKCPYCDFNSHEARGGAGALQEQRYLDALMADLEAALPLVWGRTVHSVF 73

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  PQ I  ++ G+     + ++ EIT+EANP + E + F+ YR AGV R+S+
Sbjct: 74  IGGGTPSLFSPQAIDQLIGGVRARLRLEADAEITLEANPGTFEKDRFRAYRAAGVTRLSV 133

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ L+ LGR H+ ++A+AA+  A   F   + D++YALP Q++   E ++  AL
Sbjct: 134 GVQSFDDRFLQALGRVHDRAQALAAVQEAAQAFDTFNLDIMYALPGQSLEDLERDVALAL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    HLS+Y LTIE  T F +       V+P +++A  + +   ++T A GL  YEIS 
Sbjct: 194 SLQPPHLSIYHLTIEPNTYFARFPP----VVPEDDLAYAMLDRITAMTEAAGLRRYEISA 249

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           +S  G + +HN NYW++GDY+GIG GAH ++   +HRV   +  + P+ +++     G+A
Sbjct: 250 YSRPGHQCVHNTNYWQFGDYLGIGAGAHGKLSF-AHRVVRQVRFRDPQRYMEQALA-GNA 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
           V +   +       EF++  LRLREG +++D+    G  L           R+G I R  
Sbjct: 308 VAQDHEVRRADLPFEFMLNALRLREGFALQDFMDRTGLPLSAIAGALDEAGRKGLIVR-D 366

Query: 373 FSRLRCTQRGMTMLDSV 389
            +R+R T+RG   L  +
Sbjct: 367 AARVRPTERGFDFLSDL 383


>gi|229525146|ref|ZP_04414551.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae bv. albensis VL426]
 gi|229338727|gb|EEO03744.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae bv. albensis VL426]
          Length = 391

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 143/346 (41%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+AK       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAKRIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S LG +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKLGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLATLNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|253995544|ref|YP_003047608.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           mobilis JLW8]
 gi|253982223|gb|ACT47081.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           mobilis JLW8]
          Length = 385

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 135/367 (36%), Positives = 213/367 (58%), Gaps = 15/367 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +Y+H P+CV+KCPYCDFNSH  RYK G+     ++++ + +++        R I SIF
Sbjct: 10  LALYIHIPWCVQKCPYCDFNSHESRYKNGELPEAAYVEALIKDLELSTPKVWGRKIKSIF 69

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL  P+ I  IL  +     +  + EIT+EANP +V++ NF GY++AGVNR+SL
Sbjct: 70  FGGGTPSLFSPEAIDTILSQVRALTPLEYDAEITLEANPGTVDIANFAGYKQAGVNRLSL 129

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS     L+ LGR H+  +AI A  LA   F R++ D++Y LP+Q++     + ++A+
Sbjct: 130 GIQSFNAGYLKALGRIHDDKQAIKAAELALATFDRVNLDVMYGLPQQSLADALADAKQAV 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               DHLS Y LT+E  T FY    +    LP ++ + ++    ++  + HG   YE S 
Sbjct: 190 QLNPDHLSFYHLTLEPNTPFYHTPPN----LPDDDTSAEMQIEIENFLAQHGYEHYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G+++ HNLNYW++GDY+GIG GAHS++         +  KHP+++++     G+AV
Sbjct: 246 FAKTGSQARHNLNYWQFGDYLGIGAGAHSKLSYHDKITRETRPKHPKAYMEKALA-GNAV 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             +  +S +    EF+M  LRL +G+ +  ++   G NL       +  Q  I+  Q  +
Sbjct: 305 ERESIVSQDALGFEFMMNALRLIDGVPLTLFQQHTGLNL-------MTLQPAIKAAQQKK 357

Query: 376 LRCTQRG 382
           L  T+ G
Sbjct: 358 LLTTENG 364


>gi|311267550|ref|XP_003131622.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Sus scrofa]
          Length = 442

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 220/393 (55%), Gaps = 19/393 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           GS    +YVHWP+C K+C YC+FN ++ R  V +    +  +TE Q + +L+G + + S+
Sbjct: 36  GSQRAALYVHWPYCEKRCSYCNFNKYIPR-GVDEAAMRRCLVTEAQTLLRLSGVQRVESV 94

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P+ +A +L+ +A+   +  + E+T+EANP+S   +    +R AGVNR+S
Sbjct: 95  FFGGGTPSLASPRTVAAVLEAVAQATHLPVDSEVTLEANPTSAPGSRLAAFRAAGVNRLS 154

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL++  L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ 
Sbjct: 155 IGLQSLDDAELQLLGRTHSASDALRTLAEARRLFPGRVSVDLLLGLPAQQVGPWLRQLQE 214

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    DH+SLYQLT+E+GT  +   + G L  P   +A ++Y   +++    G   YE+
Sbjct: 215 LLRRCDDHVSLYQLTLERGTALFAQVQQGALPAPDPELAAEMYQQGRAVLREAGFRQYEV 274

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVR 309
           SN +  GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V 
Sbjct: 275 SNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFIPQGAGGHTREARIQTLEPDNWMKEVM 334

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECER 360
             GH    +  L   +  +E L MGLR   G++ + W+            G + +++   
Sbjct: 335 LFGHGTRRRIRLGELELLEEVLAMGLRTDVGLTHQHWQQFEHQLTLWDVFGASEEVKVLL 394

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                    R     LRC+  G+ +LDS++  L
Sbjct: 395 EQCLLLLDHRG----LRCSWEGLAVLDSLLPIL 423


>gi|121590701|ref|ZP_01678033.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 2740-80]
 gi|121547432|gb|EAX57541.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 2740-80]
          Length = 391

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 143/346 (41%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+AK       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAKRIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAALLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S LG +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKLGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|301776703|ref|XP_002923785.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Ailuropoda melanoleuca]
          Length = 415

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 131/338 (38%), Positives = 198/338 (58%), Gaps = 6/338 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G +   +YVHWP+C K+C YC+FN ++ R  V +       +TE Q + +L+G + + S+
Sbjct: 9   GGSRAALYVHWPYCEKRCSYCNFNKYIPR-GVEEAAMRSCLVTEAQTLLRLSGVQRVESV 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P  +A +L+ + +   + ++ E+T+EANP+S   +    +  AGVNR+S
Sbjct: 68  FFGGGTPSLASPNTVAAVLEAVDQISHLPADSEVTLEANPTSASGSKLAAFGAAGVNRLS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL++  LR LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ 
Sbjct: 128 IGLQSLDDTELRLLGRTHSASDALQTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQT 187

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    DHLSLYQLT+E+GT  +   + G L  P   +  ++Y   +++    G   YE+
Sbjct: 188 LLGCCDDHLSLYQLTLERGTALFTQVQRGTLPAPDPELTAEMYQEGRAVLREAGFRQYEV 247

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVR 309
           SN +  GA S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V 
Sbjct: 248 SNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVLQGAGGHTREARIQTLEPDNWMKEVM 307

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             GH+   +  L   +  +E L MGLR   GI+ + W+
Sbjct: 308 LFGHSTRRRVPLGQLELLEEVLAMGLRTDVGITHQHWQ 345


>gi|121603727|ref|YP_981056.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas naphthalenivorans CJ2]
 gi|120592696|gb|ABM36135.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas naphthalenivorans CJ2]
          Length = 396

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 139/376 (36%), Positives = 219/376 (58%), Gaps = 12/376 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+C+KKCPYCDFNSH    ++ ++ +I + + +++    L   R++ SIF G
Sbjct: 22  PLSLYVHLPWCIKKCPYCDFNSHEAPGELPEQRYIDALVADLEASLPLVWGRTVHSIFIG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I  +L  I     + ++ EIT+EANP + E + F+ +  AGVNR+S+GV
Sbjct: 82  GGTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFRAFCSAGVNRLSIGV 141

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR H+ ++AIAA+  A   F   + D++YALP QT+     ++++AL+ 
Sbjct: 142 QSFDDVHLKALGRVHDRAQAIAAVEEAAQAFDTFNLDIMYALPGQTLENQAQDMRQALAM 201

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S+Y LTIE  T F K       ++P E+ A  + +    +T   GL  YE+S ++
Sbjct: 202 QPPHISIYHLTIEPNTYFAKFPP----LIPEEDTAYAMLDQITEMTEGAGLQRYEVSAYA 257

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-NGHAVV 316
             G    HNLNYW++GDY+GIG GAHS++   +HRV   +    E  L M +   G+AV 
Sbjct: 258 RPGHRCFHNLNYWQFGDYLGIGAGAHSKLSF-AHRVVRQVRAR-EPRLYMDKALAGNAVA 315

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           ++  +S      EF++  LRL++G  ++D+    G       ++ L   +R+G IER  F
Sbjct: 316 QETEVSRADLPFEFMLNALRLKDGFKLQDFAEKTGLPF-TAIQKGLEEAERKGLIER-DF 373

Query: 374 SRLRCTQRGMTMLDSV 389
              + T+RG   L+ +
Sbjct: 374 VHAKPTERGFDFLNDL 389


>gi|261380182|ref|ZP_05984755.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
 gi|284797029|gb|EFC52376.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
          Length = 391

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 135/374 (36%), Positives = 206/374 (55%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I + LT++Q        R I +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQLELPNIWGRPIETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KPGMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLAAMQGNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
            + ++SE    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 HKTVASEDLPFEFMMNALRLTDGVPAAMLQERTGVPTAKIMAQIETARQKGLLESDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEQGRLFLNDLL 387


>gi|289668017|ref|ZP_06489092.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 385

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/379 (37%), Positives = 220/379 (58%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E+++ +   ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEDYVDALTRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+TQ E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLTQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQRLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+++L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQTYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   + +   R L  QG++ R 
Sbjct: 304 IGGDEIVPRERLPFEYMLNLLRLHEGFRLSDFEASTGLAASVIAVPLARALA-QGWMTR- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QGERVVPTELGRRFTNDVV 380


>gi|148683981|gb|EDL15928.1| radical S-adenosyl methionine domain containing 1, isoform CRA_a
           [Mus musculus]
          Length = 442

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 200/339 (58%), Gaps = 6/339 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S    +YVHWP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S+F
Sbjct: 37  STRAALYVHWPYCEKRCSYCNFNKYIPR-GVEEGTVRNCLVTEARTLLRLSGVQRVESVF 95

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S        +  AGVNR+S+
Sbjct: 96  FGGGTPSLASPHTVAAVLEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSI 155

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRA 194
           G+QSL++  L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ+ 
Sbjct: 156 GLQSLDDAELQLLGRTHSASDALRTLAEARLLFPGRVSVDLMLGLPAQKVEPWLQQLQKL 215

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L +  DHLSLYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE+S
Sbjct: 216 LYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVS 275

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRK 310
           N +  GA S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V  
Sbjct: 276 NFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGGHTREARIQTLEPDNWMKEVTL 335

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            GH   +   L   +  +E L MGLR   G++ + W+  
Sbjct: 336 FGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQF 374


>gi|71480062|ref|NP_001013399.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Mus musculus]
 gi|81862486|sp|Q5SUV1|RSAD1_MOUSE RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|56206623|emb|CAI25588.1| radical S-adenosyl methionine domain containing 1 [Mus musculus]
 gi|187951397|gb|AAI39277.1| Radical S-adenosyl methionine domain containing 1 [Mus musculus]
 gi|223460753|gb|AAI39275.1| Radical S-adenosyl methionine domain containing 1 [Mus musculus]
          Length = 442

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 200/339 (58%), Gaps = 6/339 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S    +YVHWP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S+F
Sbjct: 37  STRAALYVHWPYCEKRCSYCNFNKYIPR-GVEEGTVRNCLVTEARTLLRLSGVQRVESVF 95

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S        +  AGVNR+S+
Sbjct: 96  FGGGTPSLASPHTVAAVLEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSI 155

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRA 194
           G+QSL++  L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ+ 
Sbjct: 156 GLQSLDDAELQLLGRTHSASDALRTLAEARLLFPGRVSVDLMLGLPAQKVEPWLQQLQKL 215

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L +  DHLSLYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE+S
Sbjct: 216 LYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVS 275

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRK 310
           N +  GA S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V  
Sbjct: 276 NFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGGHTREARIQTLEPDNWMKEVTL 335

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            GH   +   L   +  +E L MGLR   G++ + W+  
Sbjct: 336 FGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQF 374


>gi|78049073|ref|YP_365248.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325927892|ref|ZP_08189116.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas perforans
           91-118]
 gi|78037503|emb|CAJ25248.1| putative oxygen-independent coproporhyriogen III oxigenase
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|325541732|gb|EGD13250.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas perforans
           91-118]
          Length = 385

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDLALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQRLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+S+L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAQEHVLRRWKHKHPQSYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   +D    R +  QG++ R 
Sbjct: 304 IGGDEIVPGERLPFEYMLNLLRLHEGFRLSDFEASTGLAACVIDAPLARAVA-QGWMRR- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QDGRVVPTELGRRFTNDVV 380


>gi|21232683|ref|NP_638600.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767295|ref|YP_242057.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21114492|gb|AAM42524.1| oxidoreductase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572627|gb|AAY48037.1| oxidoreductase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 385

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 140/379 (36%), Positives = 216/379 (56%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +     ++++ + + ++     L   R + S+FFG
Sbjct: 8   PLALYVHLPWCVRKCPYCDFNSHAAKGAPPFDDYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   A     + N+EIT+E NP + E   F GYR AGVNR+S GV
Sbjct: 68  GGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFDGYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QSFDDAALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLAQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +A G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPQG---IPDDDDAWDMQEHCQRLLAAAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS--IEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+ +  +     KHP+S+L         
Sbjct: 245 ARPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEQQVLRRWKHKHPQSYLASAGSAAAI 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERV 371
             + E + + +   E+++  LRL EG  + D+E   G   + L     R + +   +E  
Sbjct: 305 GGD-EHVPAARLPFEYMLNLLRLHEGFRLSDFEACTGLPAQVLQAPLARAMAQGWLVE-- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QHGRIVPTELGRRFTNDVV 380


>gi|15640482|ref|NP_230109.1| coproporphyrinogen III oxidase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|153823174|ref|ZP_01975841.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae B33]
 gi|229509071|ref|ZP_04398559.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae B33]
 gi|229519739|ref|ZP_04409182.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae RC9]
 gi|229606251|ref|YP_002876899.1| coproporphyrinogen III oxidase [Vibrio cholerae MJ-1236]
 gi|254850686|ref|ZP_05240036.1| coproporphyrinogen III oxidase [Vibrio cholerae MO10]
 gi|9654880|gb|AAF93628.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|126519300|gb|EAZ76523.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae B33]
 gi|229344428|gb|EEO09403.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae RC9]
 gi|229353996|gb|EEO18930.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae B33]
 gi|229368906|gb|ACQ59329.1| coproporphyrinogen III oxidase oxygen-independent-like radical SAM
           family enzyme [Vibrio cholerae MJ-1236]
 gi|254846391|gb|EET24805.1| coproporphyrinogen III oxidase [Vibrio cholerae MO10]
          Length = 391

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/346 (41%), Positives = 197/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
           SL +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   SLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|326318284|ref|YP_004235956.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375120|gb|ADX47389.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 416

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/378 (36%), Positives = 219/378 (57%), Gaps = 13/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +YVH P+C+KKCPYCDFNSH  R   G   ++ ++ + + +++    L   R++ S+
Sbjct: 39  PLSLYVHLPWCLKKCPYCDFNSHEARGGAGALQEQRYLDALMADLEAALPLVWGRTVHSV 98

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL  P+ I  ++ G+     + ++ EIT+EANP + E + F+ YR AGV R+S
Sbjct: 99  FIGGGTPSLFSPEAIDRLISGVRARLRLEADAEITLEANPGTFEKDRFRAYRTAGVTRLS 158

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQS +++ L+ LGR H+ ++A+AA+  A   F   + D++YALP Q++   E ++  A
Sbjct: 159 VGVQSFDDRFLQALGRVHDRAQALAAVQEAAQAFDTFNLDIMYALPGQSLEDLEQDVALA 218

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS    HLS+Y LTIE  T F K       V+P +++A  + +    +T   GL  YEIS
Sbjct: 219 LSLQPPHLSIYHLTIEPNTYFAKFPP----VVPEDDLAYAMLDRITEMTETAGLRRYEIS 274

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGH 313
            ++  G + +HN NYW++GDY+GIG GAH ++   +HRV   +  + P+ +++     G+
Sbjct: 275 AYARPGHQCVHNTNYWQFGDYLGIGAGAHGKLSF-AHRVVRQVRFRDPQRYMEQALA-GN 332

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERV 371
           AV +   +       EF++  LRLREG +++D+    G  L           R+G I R 
Sbjct: 333 AVAQDHEVRRADLPFEFMLNALRLREGFALQDFADRTGLPLSAIAGALDEAGRKGLIVR- 391

Query: 372 QFSRLRCTQRGMTMLDSV 389
             +R+R T+RG   L  +
Sbjct: 392 DAARVRPTERGFDFLSDL 409


>gi|300690922|ref|YP_003751917.1| coproporphyrinogen dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299077982|emb|CBJ50623.1| Coproporphyrinogen dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 424

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 220/384 (57%), Gaps = 14/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH      + +E F+ +   +++    +   R + +
Sbjct: 40  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEPGIPEERFLAAIRQDLEAALPMVWGRRVHT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+    +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 100 IFIGGGTPSLLSAHGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  LR LGR H+A+EA AAI LAR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 160 SIGIQSFNDAHLRALGRIHSAAEARAAIDLARAHFDNINLDLMFALPGQTLAECEADVEA 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +  G   YE+
Sbjct: 220 ALSFDTSHVSLYHLTLEPNTYFAKHPP----ALPDDDTAFAMQDWIHARLAGAGYEHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  KHPE++L+     G
Sbjct: 276 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVIREMRHKHPETYLRQAETAG 334

Query: 313 HA--VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGF 367
            A  V E+  + +     EF++  LRL +G  V  ++   G   R+++ E +   QR G 
Sbjct: 335 GAAMVQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLRSIERELDAAEQR-GL 393

Query: 368 IERVQFSRLRCTQRGMTMLDSVIA 391
           + R   + +R T+ G   L+ + A
Sbjct: 394 LARDHVA-IRPTELGQRFLNDLQA 416


>gi|229519841|ref|ZP_04409275.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae TM 11079-80]
 gi|229343129|gb|EEO08113.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae TM 11079-80]
          Length = 391

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/348 (40%), Positives = 197/348 (56%), Gaps = 11/348 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSI 71
           S  L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR +
Sbjct: 4   SPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKISLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
               A ++ E L ++Q    EF M   RL E     D+ +  G  +D+
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTVTTGLTIDV 347


>gi|328867221|gb|EGG15604.1| hypothetical protein DFA_10446 [Dictyostelium fasciculatum]
          Length = 470

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/413 (37%), Positives = 228/413 (55%), Gaps = 45/413 (10%)

Query: 9   NNMTG--QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           NN  G  Q  + + +Y+HWP+C K C YC FN ++    V      QS +TE+  + +L 
Sbjct: 45  NNEDGISQREHPISIYIHWPYCSKICGYCSFNKYLDGPHVDHSRMKQSMITELSNLIKLY 104

Query: 67  GPRS----------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN---VEITIEAN 113
            P S          + SI+FGGGTPSL     ++ I++ + + +  ++N   +EI +EAN
Sbjct: 105 YPSSSSINNNIQYKLKSIYFGGGTPSLATIDTLSSIVETVYQYFPTTTNRKDLEINLEAN 164

Query: 114 PSSVEVNNFQGYRK-AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P +++ N  +  +   GVNR+SLGVQ+L ++ L+FLGR HN  +AI +I +  +IF R+S
Sbjct: 165 PDAMDKNYLKDLKDIVGVNRLSLGVQALNDEDLKFLGRTHNTKQAIESIEICNSIFDRVS 224

Query: 173 FDLIYALPKQ-TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPS 228
           FD+IYA   Q ++ QW  EL+ A+  +  HLSLY LT E GT F+K    H+   ++ P+
Sbjct: 225 FDMIYARRGQHSVEQWRQELKLAVQLSKGHLSLYNLTFEDGTAFFKRLRKHRSNHIIKPT 284

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
            +     Y      T   G++ YEISN S  G  S HNLNYWR GDYIGIGPGA SRV V
Sbjct: 285 NDQCSLHYMAAIEETEKVGMNQYEISNFSIPGHHSQHNLNYWRGGDYIGIGPGACSRVSV 344

Query: 289 ------------GSHRVAISIEKHPESWLKMVRKNGHAVVEKE--FLSSEQQADEFLMMG 334
                          +VA+    HP++W+  V  NGH + E E   LS + + +E L+MG
Sbjct: 345 FNNNNQQDNTNLKPEKVALKTIIHPKTWMDRVEANGHGLFEAETTTLSFKDRINELLLMG 404

Query: 335 LRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLD 387
           LR +EG+S   +  L+   LD E          ++ +  SRL+    GM +LD
Sbjct: 405 LRTKEGVSRSTFRYLS-HGLDFE--------QVLDPIVLSRLQSI--GMIVLD 446


>gi|289662150|ref|ZP_06483731.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 385

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/379 (37%), Positives = 220/379 (58%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E+++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEDYVDALIRDLDADLPLAWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQRLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+++L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQTYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   + +   R L  QG++ R 
Sbjct: 304 IGGDEIVPRERLPFEYMLNLLRLHEGFRLSDFEASTGLAASVIAVPLARALA-QGWMTR- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QGERVVPTELGRRFTNDVV 380


>gi|229512517|ref|ZP_04401988.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae TMA 21]
 gi|229350410|gb|EEO15359.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae TMA 21]
          Length = 391

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 197/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+      ++EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIVFKPDIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|187929361|ref|YP_001899848.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12J]
 gi|309781784|ref|ZP_07676517.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
 gi|187726251|gb|ACD27416.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12J]
 gi|308919425|gb|EFP65089.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
          Length = 422

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/382 (37%), Positives = 222/382 (58%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +E F+ +   +++    +   R + +
Sbjct: 38  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEQGIPEERFLAAVRQDLEAALPMVWGRHVHT 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 98  IFIGGGTPSLLSAQGLDRLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 158 SIGIQSFNDAYLQALGRIHSAAEARAAIDMARAHFDNINLDLMFALPGQTLAECEADVEA 217

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+  +H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 218 ALSFDTNHVSLYHLTLEPNTYFAKYPP----ALPDDDAAFAMQDWIHARLAAAGYEHYEV 273

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  KHP+++L+     G
Sbjct: 274 SAYAKAGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVIREMRHKHPDTYLRQAETAG 332

Query: 313 HAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGF 367
            A V  E+  + +     EF++  LRL +G  V  ++   G  L    ER L   +++G 
Sbjct: 333 GAAVMQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLR-SIERQLDAAEQRGL 391

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           + R   + +R T+ G   L+ +
Sbjct: 392 LTRDHVA-IRPTELGQRFLNDL 412


>gi|163856586|ref|YP_001630884.1| coproporphyrinogen III oxidase [Bordetella petrii DSM 12804]
 gi|163260314|emb|CAP42616.1| putative porphyrin oxidoreductase [Bordetella petrii]
          Length = 405

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 220/375 (58%), Gaps = 10/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +   +++        R + S+F GG
Sbjct: 32  LSVYVHVPWCVRKCPYCDFNSHAAPAELPERAYLDALRADLEQALPSVWGRQVVSVFLGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  +     V  + EIT+EANP + E   F+ Y  +GVNR+SLG+Q
Sbjct: 92  GTPSLLSAAGLDELLAMLRACLNVLPDAEITMEANPGTAEAGRFRDYAASGVNRLSLGIQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ LGR H+AS+A AAI +A+    R++ DL++ALP Q MT    ++++ALS+ 
Sbjct: 152 SFDDAQLKKLGRIHDASQARAAIEMAQRAVDRVNLDLMFALPGQDMTACLDDVRQALSFG 211

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLY LT+E  T+F K   +    LP ++ +  + +  ++   A GL  YE+S ++ 
Sbjct: 212 TEHLSLYHLTLEPNTVFAKYPPE----LPDDDASAAMQDAVEAALQAAGLLRYEVSAYAR 267

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVVE 317
            GA   HNLNYW +GDY+G+GPGAH ++      V  +  ++P+SW+   + ++G  + E
Sbjct: 268 PGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIVREARLRNPDSWMAAAIARDGSHIAE 327

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
              +  ++   EF++  LRL++G++   ++   G +L     + LQ   ++G ++    +
Sbjct: 328 ARTVGPDELPFEFMLNALRLKDGVAASSFQERTGLSL-AAIAQPLQAATKRGLLD-PDPT 385

Query: 375 RLRCTQRGMTMLDSV 389
           RLR T  G   L+ +
Sbjct: 386 RLRATPLGWRFLNDL 400


>gi|258620718|ref|ZP_05715753.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM573]
 gi|258586916|gb|EEW11630.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM573]
          Length = 394

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 197/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLTSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHKKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +++
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEV 347


>gi|294667392|ref|ZP_06732610.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602833|gb|EFF46266.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 385

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 143/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEEYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPAHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQGLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+S+L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   ++    R +  QG++ R 
Sbjct: 304 IGGDEIVPGERLPFEYMLNLLRLHEGFRLSDFEASTGLAACAIEAPLARAVA-QGWM-RQ 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QDGRVVPTELGRRFTNDVV 380


>gi|294627119|ref|ZP_06705707.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598552|gb|EFF42701.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 385

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 143/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEEYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPAHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQGLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+S+L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+ + E+++  LRL EG  + D+E    LA   +     R +  QG++ R 
Sbjct: 304 IGGDEIVPGERLSFEYMLNLLRLHEGFRLSDFEASTGLAACAIKAPLARAVA-QGWM-RQ 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QDGRVVPTELGRRFTNDVV 380


>gi|153826545|ref|ZP_01979212.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-2]
 gi|149739637|gb|EDM53851.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-2]
          Length = 391

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKSGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|153828432|ref|ZP_01981099.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae 623-39]
 gi|148876141|gb|EDL74276.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae 623-39]
          Length = 391

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|258625603|ref|ZP_05720485.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM603]
 gi|258582105|gb|EEW06972.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM603]
          Length = 394

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 197/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHKKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +++
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEV 347


>gi|319638392|ref|ZP_07993154.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
 gi|317400141|gb|EFV80800.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
          Length = 391

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 132/374 (35%), Positives = 206/374 (55%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHTPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFEKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLAAMQSNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNVLRLTDGVPAATLQERTGVPTAKIMTQIETARQKGLLESDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEQGRLFLNDLL 387


>gi|229530297|ref|ZP_04419685.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae 12129(1)]
 gi|229332070|gb|EEN97558.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae 12129(1)]
 gi|327483309|gb|AEA77716.1| Radical SAM family enzyme, oxygen-independent [Vibrio cholerae
           LMA3894-4]
          Length = 391

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIVFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|121728584|ref|ZP_01681605.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V52]
 gi|153819142|ref|ZP_01971809.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae NCTC 8457]
 gi|227080665|ref|YP_002809216.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae M66-2]
 gi|229507093|ref|ZP_04396599.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae BX 330286]
 gi|298501014|ref|ZP_07010815.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
 gi|121629140|gb|EAX61583.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V52]
 gi|126510287|gb|EAZ72881.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae NCTC 8457]
 gi|227008553|gb|ACP04765.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae M66-2]
 gi|229355838|gb|EEO20758.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae BX 330286]
 gi|297540262|gb|EFH76322.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
          Length = 391

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAKLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|254291166|ref|ZP_04961962.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae AM-19226]
 gi|150422860|gb|EDN14811.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae AM-19226]
          Length = 391

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLTRLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|148980494|ref|ZP_01816091.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
 gi|145961219|gb|EDK26533.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
          Length = 395

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 144/385 (37%), Positives = 214/385 (55%), Gaps = 20/385 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++       QL G PR + S
Sbjct: 10  ALSLYVHIPWCVQKCPYCDFNSHALKTEIPEKEYIDALLEDLDTDIEKYQLNGMPRPLHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAG+ RI
Sbjct: 70  IFFGGGTPSLFSPEGIGRLLQGIEQRIPFKPEIEITMEANPGTIEAERFAGYQKAGITRI 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +L 
Sbjct: 130 SVGVQSFEQEKLERLGRIHGQDEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALADLD 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++ L     +  G   YE
Sbjct: 190 KAIELDPPHLSWYQLTIEPNTMFYYKTP----TLPDDDDLWDIFELGHKKLADAGYVQYE 245

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +  
Sbjct: 246 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQNM 305

Query: 312 GHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----IECERNLQRQ 365
               +  EF +++E +  EF M   RL E    +D+    G   D     IE  + L   
Sbjct: 306 VKPYISDEFEVANEDRPFEFFMNRFRLMEACPKQDFIDTTGLGFDAVQPTIEWAKEL--- 362

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVI 390
           G++     +  + T++G   L+ ++
Sbjct: 363 GYLNETD-THWQITEKGKLFLNDLL 386


>gi|147675539|ref|YP_001215981.1| coproporphyrinogen III oxidase [Vibrio cholerae O395]
 gi|146317422|gb|ABQ21961.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae O395]
 gi|227012308|gb|ACP08518.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae O395]
          Length = 391

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 195/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|126343210|ref|XP_001376343.1| PREDICTED: similar to Radical S-adenosyl methionine domain
           containing 1 [Monodelphis domestica]
          Length = 537

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 145/389 (37%), Positives = 223/389 (57%), Gaps = 19/389 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           GS S  +YVHWP+C K+C YC+FN ++ R ++ ++      + E   + +L+G + I+S+
Sbjct: 113 GSRSAALYVHWPYCEKRCYYCNFNKYIPR-RLDEDAMRTCLVQEATTLLKLSGVQRINSV 171

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P  +A +L+ IA+N  + +  E+T+EANP+S + +    ++ AG+NRIS
Sbjct: 172 FFGGGTPSLASPYTVASVLEAIAQNTHLPAKAEVTLEANPTSSKASRLAAFQVAGINRIS 231

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL++  L+ LGR H+ASEA+  +  AR ++P R S DL++ LP Q +  W  +LQ 
Sbjct: 232 IGIQSLDDTELQLLGRTHSASEALGTLEEARRLYPGRTSVDLMFGLPGQQVEPWLGQLQE 291

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            LS   DH+SLYQLT+E+GT  +   + G L  P    A  +Y   + +    G   YE+
Sbjct: 292 LLSRCDDHVSLYQLTLERGTTLFAQVQRGTLPSPDPETAAQMYQDGREVLREAGFRQYEV 351

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVR 309
           SN +   A S HN  YW+ G YIG+GPGAH R       GS R A      P++W+K V 
Sbjct: 352 SNFARNEALSSHNWTYWQGGQYIGVGPGAHGRFVPQGDGGSLREARIQTLEPDNWMKEVS 411

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECER 360
             GH   ++  L   +  +E L +GLR   GI+ + W             G + ++   R
Sbjct: 412 VFGHGTRKRVPLGELELLEEVLALGLRTDIGITHQHWLQFEPHLSLWEVFGESEEV---R 468

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            LQ QG +  +    LRC+ +G+ +LD++
Sbjct: 469 ELQSQGLL-LLDPRGLRCSWKGLAVLDTI 496


>gi|145589265|ref|YP_001155862.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047671|gb|ABP34298.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 392

 Score =  258 bits (660), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 133/394 (33%), Positives = 220/394 (55%), Gaps = 23/394 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENF-----IQSFLTEMQWM 62
           N +T      L +Y+H+P+C KKCPYCDFNSH ++  K     F     I++ + +++  
Sbjct: 3   NPVTLSALPPLALYIHFPWCEKKCPYCDFNSHQIKDAKSSTNGFDEPRYIKALIADLETE 62

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                 R + S+F GGGTPSL+ P+ +  +L  +     +  + EIT+EANP SVE   F
Sbjct: 63  LPNIWGRQVHSVFIGGGTPSLLSPEGMDQLLSAVRARINLEPDAEITMEANPGSVEAEKF 122

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
             + K+G+NR+SLG+QS +++ L+ LGR HN +EA  A+ +A + F  ++ DL+Y LP Q
Sbjct: 123 AAFAKSGINRVSLGIQSFQDEQLKALGRIHNGAEAKRAVQIALDHFKSVNIDLMYGLPNQ 182

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +   + +++ ALS+   HLSLY LT+E  T F          LP+E V   +++    +
Sbjct: 183 NLDSAKTDIETALSFNTPHLSLYNLTLEPNTYFANFPPK----LPNEEVIDAMFDQNVDL 238

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            S  G   YEIS ++    E  HNLNYWR+GDYIGIG GAH ++   +       E+HPE
Sbjct: 239 LSKAGYRRYEISAYAKKDQECKHNLNYWRFGDYIGIGAGAHGKISYPNKITRQVRERHPE 298

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-------RNLD 355
           ++++++   G+A++E   + ++    EF++  LRL +G+    +    G       + L+
Sbjct: 299 TYMQLMESKGNALIESREIEAKDLPFEFMLNTLRLSDGVDTNTYSERTGLPLSTISKGLN 358

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             C++ L  +        S+L+ T +G+  L+++
Sbjct: 359 EACKKGLLDE------NPSKLKATDQGLRYLNNL 386


>gi|21244125|ref|NP_643707.1| coproporphyrinogen III oxidase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109754|gb|AAM38243.1| oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 385

 Score =  258 bits (660), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 142/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEAYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPAHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQGLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G  +H +     KHP+S+L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEAHVLRRWKHKHPQSYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   ++    R + + G++ R 
Sbjct: 304 IGGDEIVPGERLPFEYMLNLLRLHEGFRLSDFEASTGLAACAIEAPLARAVAK-GWM-RQ 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QDGRVVPTELGRRFTNDVV 380


>gi|254226316|ref|ZP_04919907.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V51]
 gi|125621178|gb|EAZ49521.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V51]
          Length = 391

 Score =  258 bits (660), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 195/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAECIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|241767031|ref|ZP_04764816.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
 gi|241362434|gb|EER58378.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
          Length = 418

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/381 (36%), Positives = 217/381 (56%), Gaps = 13/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSIS 72
            L +YVH P+C+KKCPYCDFNSH  R   G +      ++ + + +++    L   RS+ 
Sbjct: 39  PLALYVHLPWCLKKCPYCDFNSHEWRSAGGAQELPEARYLDALVADLEAALPLVWGRSVH 98

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL  PQ+I  ++  I     ++++ EIT+EANP + E + F+ +R AGV R
Sbjct: 99  SIFIGGGTPSLFSPQSIDRLIGDIRARLPLAADCEITLEANPGTFEKDRFRAFRAAGVTR 158

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+GVQS  ++ L+ LGR H+ ++A+AA+  A + F   + D++YALP QT+ + E ++ 
Sbjct: 159 LSVGVQSFNDRHLQALGRVHDRAQALAAVQEAASAFDTFNLDIMYALPGQTLQELEQDMA 218

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL+ A  HLS+Y LTIE  T F K        +P ++ A  + +    +T   GL  YE
Sbjct: 219 TALALAPPHLSVYHLTIEPNTYFAKYPP----AIPEDDQAYAMLDRITEMTGQAGLARYE 274

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS ++  G    HN NYW++GDY+G+G GAHS++      V  +  + P  ++      G
Sbjct: 275 ISAYARPGHACFHNTNYWQFGDYLGLGAGAHSKLSFAHRVVRQARFRDPRLYMDNALA-G 333

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIER 370
            AV   E +       EF++  LRLREG +++D+    G++L          +R+G I R
Sbjct: 334 RAVALDEDVRRADLPFEFMLNALRLREGFALQDFVERTGQSLTAIAGALDEAERKGLITR 393

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
               R+R T+RG+  L+ + A
Sbjct: 394 -DLGRVRPTERGVDFLNDLQA 413


>gi|297580594|ref|ZP_06942520.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535010|gb|EFH73845.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 391

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/346 (40%), Positives = 194/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPSYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSELLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|121611071|ref|YP_998878.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verminephrobacter eiseniae EF01-2]
 gi|121555711|gb|ABM59860.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verminephrobacter eiseniae EF01-2]
          Length = 416

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 215/383 (56%), Gaps = 18/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY--------KVGQENFIQSFLTEMQWMRQLTGPR 69
            L +YVH P+C++KCPYCDFNSH  R          + ++ ++ + + +++    L   R
Sbjct: 31  PLSLYVHLPWCLRKCPYCDFNSHALRAGNAGSAAEPLPEQRYLAALMADLEAALPLVWGR 90

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+F GGGTPSL  P  I  ++  I     +    EIT+EANP S E   F+ +R AG
Sbjct: 91  MVRSVFIGGGTPSLFSPAAIDQLIGAIRARLPLVPACEITLEANPGSFEKERFRAFRAAG 150

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V R+S+GVQS  ++ L  LGR H+ ++A+AA+  A   F   + D++YALP QT+ + E 
Sbjct: 151 VTRLSVGVQSFADRHLAALGRVHDRAQALAAVQEAAQAFETFNLDIMYALPGQTLQELEQ 210

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++AL+    H+S+YQLTIE  T F K        LP +++A  + +    +T   GL 
Sbjct: 211 DLRQALALEPPHISVYQLTIEPNTRFAKFPP----ALPEDDLAYAMLDRITQLTGQAGLA 266

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMV 308
            YEIS ++  G +  HN NYW++GDY+GIG GAHS++   +HRV   +  + P  +++  
Sbjct: 267 RYEISAYARPGQQCAHNTNYWQFGDYLGIGAGAHSKLSF-AHRVVRQVRLREPGRYMEQA 325

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQG 366
              G A+ + E +       EF++  LRL +G + +D+    G  L    E   + +RQG
Sbjct: 326 LA-GRALAQDEEVRRADLPFEFMLNALRLCDGFAPQDFMARTGLPLSAIAEGLASAERQG 384

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
            IER    R+R T RG+  L+ +
Sbjct: 385 LIER-SMERIRATPRGLDFLNDL 406


>gi|262403919|ref|ZP_06080476.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC586]
 gi|262349881|gb|EEY99017.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC586]
          Length = 391

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/346 (39%), Positives = 197/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++    +  +    PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKDDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +++
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEV 347


>gi|302877639|ref|YP_003846203.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
 gi|302580428|gb|ADL54439.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
          Length = 394

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/376 (37%), Positives = 219/376 (58%), Gaps = 12/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +Y+H P+CVKKCPYCDFNSH  R    ++ ++ + + +++  + Q+ G R + ++FFG
Sbjct: 19  LSLYIHVPWCVKKCPYCDFNSHEARGGFSEKEYVDALIRDLEMALPQIWG-RKVYTVFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + I  IL  +     +S + EIT+EANP +VE   F  +R AGVNR+S+G+
Sbjct: 78  GGTPSLLSGEAITEILRQVRMLLPLSGDAEITLEANPGTVEAAKFAAFRDAGVNRLSMGI 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L+ LGR H A EA AAI +A+  F  ++ DL+YALPKQT+ Q   ++Q AL++
Sbjct: 138 QSFNDTHLQALGRIHTADEAKAAIDIAQLHFDNINLDLMYALPKQTLDQALQDVQTALTF 197

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y LT+E  TLFY+        LP ++ + D+    +++ + +G   YE S  +
Sbjct: 198 KPQHLSAYHLTLEPNTLFYRNPPS----LPDDDASADMQQAIEALLAENGYQHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HNLNYW++GDY+GIG GAHS++      V  +  K P+++++ V        E
Sbjct: 254 QPNRRSRHNLNYWKFGDYLGIGAGAHSKLSFPDKIVREARYKQPQAYMQQVALGAPVQTE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
            E +S ++   EF+M  LRL EG     +      +L I  +R L   +++G + R    
Sbjct: 314 HE-VSRDEIPFEFMMNALRLNEGFDAALFCERTSLSL-ISIQRELLDAEKRGLLSR-DIQ 370

Query: 375 RLRCTQRGMTMLDSVI 390
           R+  T +G   L+ ++
Sbjct: 371 RIAPTLQGQRFLNDLL 386


>gi|166713275|ref|ZP_02244482.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 385

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/379 (36%), Positives = 221/379 (58%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   +     + N+E+T+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPEAIDRFLQAASARLRFAPNLEMTLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H++++A  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSADAERAIKLAQDAGYDNFNIDLMYALPEQTLLQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQRLLANAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+S+L        +
Sbjct: 245 ARPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   +++   R L  QG++ R 
Sbjct: 304 IGGDEIVPRERLPFEYMLNLLRLHEGFRLNDFEASTGLAASVIEVPLARALA-QGWMSR- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q +R+  T+ G    + V+
Sbjct: 362 QDARVVPTELGRRFTNDVV 380


>gi|241758876|ref|ZP_04756989.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
 gi|241321084|gb|EER57297.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
          Length = 391

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 3/334 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAKSIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGELEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KANMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRSRHPNDYLAAMQSNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           ++ +++E    EF+M  LRL +G+     +   G
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPASTLQERTG 347


>gi|34496382|ref|NP_900597.1| coproporphyrinogen III oxidase [Chromobacterium violaceum ATCC
           12472]
 gi|34102235|gb|AAQ58601.1| probable porphyrin oxidoreductase [Chromobacterium violaceum ATCC
           12472]
          Length = 396

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 210/375 (56%), Gaps = 9/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH+P+C++KCPYCDFNSH  +    +  ++ + L ++++       R ++SIF GG
Sbjct: 19  LALYVHFPWCIRKCPYCDFNSHEPKNGFDEMAYVDALLRDLEYSLPEVWGRPLTSIFMGG 78

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  PQ +  +L G+     +  + EIT+EANP + E+  F+GYR+AG+NR+S+G+Q
Sbjct: 79  GTPSLFSPQAMDALLAGVRARMKLHPDAEITMEANPGTFEIERFRGYREAGINRLSIGIQ 138

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L+ LGR H+  EA  A+ +A   F  ++ DL+YALP QT+ +   +L  ALSY 
Sbjct: 139 SFNPKHLKALGRIHDGDEAKRAVEIALTHFDNVNLDLMYALPGQTLDEALSDLNTALSYG 198

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS Y LTIE  TLF          LP + V+ D+    +S   A G   YE S  + 
Sbjct: 199 ITHLSAYHLTIEPNTLFAAQTPQN---LPDDEVSADMQEAIESCLEAAGFDHYETSAFAK 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HNLNYW++GDY+GIG GAH ++   +  V     K P ++LK V   G  +   
Sbjct: 256 PGRHSRHNLNYWQFGDYVGIGAGAHGKISSHAGIVRQMRHKQPAAYLKAV-AAGAPLQSS 314

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           + ++      EF+M  LRL  G   + ++   G  L +   R L   Q QG ++    + 
Sbjct: 315 QKVARADLPFEFMMNLLRLTSGFESRLFQERTGLPLAL-IRRQLDAAQAQGLLD-TDGAI 372

Query: 376 LRCTQRGMTMLDSVI 390
           LR T +G   L+ ++
Sbjct: 373 LRPTLKGQRFLNDLL 387


>gi|153216271|ref|ZP_01950364.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 1587]
 gi|124114360|gb|EAY33180.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 1587]
          Length = 391

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/346 (40%), Positives = 195/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGEPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GY  AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYSTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|262191066|ref|ZP_06049273.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           CT 5369-93]
 gi|262033042|gb|EEY51573.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           CT 5369-93]
          Length = 391

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/346 (40%), Positives = 194/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPSYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 347


>gi|229593141|ref|YP_002875260.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25]
 gi|229365007|emb|CAY53156.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 379

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 215/377 (57%), Gaps = 14/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++         R +SSIFFGG
Sbjct: 7   LALYIHIPWCVRKCPYCDFNSHTASKVLPEEEYVDALLADLDQDLHAVYGRELSSIFFGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL     +  +L G+      +S++EIT+EANP + E   F  YRK G+NR+S+G+Q
Sbjct: 67  GTPSLFSAAALGRLLKGVEARIPFASDIEITLEANPGTFEQEKFVAYRKLGINRLSIGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S ++Q L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A++ 
Sbjct: 127 SFQQQKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLEDALSDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLT+E  T+F+         LP ++   D+    Q++ + HG   YE+S ++
Sbjct: 187 KPTHLSWYQLTLEPNTVFWNQPP----ALPEDDTLWDIQEAGQALLAEHGYAQYEVSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +       
Sbjct: 243 QPGRPARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRAPKDYLNPAKSFQAGAK 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERVQF 373
           E   L++E+   EFLM  LRL EG+  K +     LA  +LD E  R  ++ G ++ V+ 
Sbjct: 303 E---LTNEELPFEFLMNALRLTEGVEAKLYAERTGLALSSLD-EGRREAEQSGLMQ-VEP 357

Query: 374 SRLRCTQRGMTMLDSVI 390
           SRL  T RG   L+ ++
Sbjct: 358 SRLAATDRGQLFLNDLL 374


>gi|258544888|ref|ZP_05705122.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
 gi|258519808|gb|EEV88667.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
          Length = 376

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/375 (38%), Positives = 205/375 (54%), Gaps = 14/375 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H P+CV+KCPYCDFNSH  R  + +  +++  L ++        PR I SIF GGGT
Sbjct: 7   LYIHIPWCVRKCPYCDFNSHALRGAIDEAGYVRHLLADLA---HDLDPRPIESIFIGGGT 63

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL     IA +LDGI +   +    EIT+EANP + E   F  YR AGVNR+S+GVQS 
Sbjct: 64  PSLFSAAAIAALLDGINRQSPLPDTCEITLEANPGTFEQAKFADYRAAGVNRLSIGVQSF 123

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +   L  LGR HN  EAI A+ +A    F R++ DL++ALP Q +     +L++A + A 
Sbjct: 124 DAAQLHALGRIHNRDEAIRAVAIAEKAGFQRINLDLMFALPGQDVAGALADLRQATALAP 183

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S YQLT+E  T FY         LP  +  +D+Y    +  SAHG   YE S     
Sbjct: 184 EHISWYQLTLEPNTAFYANPP----ALPDSDTQIDIYEAGSAHLSAHGYRQYETSAWR-A 238

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           GA   HNLNYW+YGDY+GIG GAH +          S  + P ++ K      +   ++ 
Sbjct: 239 GAPCRHNLNYWQYGDYLGIGAGAHGKQTRDGVISRSSKYRAPGAYQKAAGNGENPYRDQR 298

Query: 320 F-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           F +  ++Q  E +M  LRL++GI        +   LD +    L R   QG I+     R
Sbjct: 299 FTVPRDEQPFEIMMNALRLKDGIPTAYLHERSALTLD-DLRPTLARLIAQGLIDPAIEQR 357

Query: 376 LRCTQRGMTMLDSVI 390
           L+ T+RG  +L++V+
Sbjct: 358 LKTTERGFALLNNVL 372


>gi|70733131|ref|YP_262904.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf-5]
 gi|68347430|gb|AAY95036.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 400

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 215/377 (57%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++         R +SSIFFG
Sbjct: 27  PLALYIHIPWCVRKCPYCDFNSHAASPTLPEEEYVDALLADLDQDLHAVHGRELSSIFFG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   Q +  +L G+ +    + ++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 87  GGTPSLFSAQALGRLLKGVEQRIRFAPDIEITLEANPGTFEQEKFTAYRALGINRLSIGI 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +EQ L+ LGR HN  EAI A  +AR   F   + DL++ LP Q++     +L++A++
Sbjct: 147 QSFQEQKLKALGRIHNGDEAIRAAGMARQAGFDNFNLDLMHGLPDQSLDDALGDLRQAIA 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+        VLP ++   D+    Q++ + HG   YE+S +
Sbjct: 207 MKPTHLSWYQLTLEPNTVFWNQPP----VLPEDDTLWDIQEAGQALLAEHGYAQYEVSAY 262

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   ++     
Sbjct: 263 AQPGRAARHNLNYWSFGDFIGIGAGAHGKLSHPDGRILRTWKTRLPKDYLNPAKQ--FKA 320

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
            EK  L +E+   EFLM  LRL +G+    +    G +L    E  R  ++ G ++ V+ 
Sbjct: 321 GEKA-LGNEELPFEFLMNALRLTDGVDAALFAQRTGLDLVSLAEGRRQAEQSGLLQ-VEP 378

Query: 374 SRLRCTQRGMTMLDSVI 390
           SRL  T RG   L+ ++
Sbjct: 379 SRLAATARGQLFLNDLL 395


>gi|225075212|ref|ZP_03718411.1| hypothetical protein NEIFLAOT_00212 [Neisseria flavescens
           NRL30031/H210]
 gi|224953387|gb|EEG34596.1| hypothetical protein NEIFLAOT_00212 [Neisseria flavescens
           NRL30031/H210]
          Length = 391

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 130/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I +  T++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALFTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F      G   LP +  A+D+ +             YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGADFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KPGMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLAAMQSNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ ++++    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAKDLPFEFMMNALRLTDGVPAAMLQERTGVPTAKIMAQIETARQKGLLESDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEQGRLFLNDLL 387


>gi|262164092|ref|ZP_06031831.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
 gi|262027620|gb|EEY46286.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
          Length = 394

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/346 (40%), Positives = 195/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G A+      ++EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGFAERIAFKPDIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHKKLSDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +++
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEV 347


>gi|58580763|ref|YP_199779.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84622694|ref|YP_450066.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578266|ref|YP_001915195.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58425357|gb|AAW74394.1| oxidoreductase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84366634|dbj|BAE67792.1| oxidoreductase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188522718|gb|ACD60663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 385

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 140/379 (36%), Positives = 219/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P  I   L   +     + N+E+T+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPPDAIDRFLQAASARLRFAPNLEMTLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H++++A  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSADAERAIKLAQDAGYDNFNIDLMYALPEQTLLQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPTHLSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQRLLANAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+S+L        +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLASA-GTAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
           +   E +  E+   E+++  LRL EG  + D+E    LA   +++   R L  QG++ R 
Sbjct: 304 IGGDEIVPRERLPFEYMLNLLRLHEGFRLSDFEASTGLAASVIEVPLARALA-QGWMTR- 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T+ G    + V+
Sbjct: 362 QDGRVVPTELGRRFTNDVV 380


>gi|330826507|ref|YP_004389810.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
 gi|329311879|gb|AEB86294.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
          Length = 410

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/382 (35%), Positives = 221/382 (57%), Gaps = 18/382 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSIS 72
            L +YVH P+C++KCPYCDFNSH   +  G E      +  + + +++    L   R++ 
Sbjct: 34  PLSLYVHLPWCLRKCPYCDFNSH---HAPGGEPLPEARYTAALVADLEAALPLVWGRTVQ 90

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IF GGGTPSL  PQ+I  +L  I     + ++ E+T+EANP + E   F+ YR AGV R
Sbjct: 91  TIFIGGGTPSLFAPQSIDRLLSDIRARLRLEADCEVTLEANPGTFEKERFRAYRDAGVTR 150

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+GVQS  ++ L+ LGR H+ ++A+AA+  A   F   + D++YALP QT  + E +++
Sbjct: 151 LSIGVQSFNDRHLQALGRVHDRAQALAAVEEAAQAFETFNLDIMYALPGQTPAEQEQDMR 210

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+ A  H+S+Y LTIE  T F K        LP ++ A  + +    +T+A GL  YE
Sbjct: 211 QALALAPPHISIYHLTIEPNTYFAKYPPR----LPEDDQAYAMLDRITELTAAAGLSRYE 266

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           +S ++  G + LHN NYW++GDY+GIG GAHS++   +HR+   +  + P+ ++     +
Sbjct: 267 VSAYAREGHQCLHNRNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRLRDPQLYMAGA-LS 324

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIE 369
           G A+ + E +       EF++  LRLREG +++D+    G+ L    +  +  + +G I 
Sbjct: 325 GRAIAQDEDVRRADLPFEFMLNALRLREGFALQDFTERTGQPLTAIAQGLQQAEARGLIA 384

Query: 370 RVQFSRLRCTQRGMTMLDSVIA 391
           R     +R T+RG   L  + A
Sbjct: 385 R-DMGHVRPTERGFDFLSDLQA 405


>gi|171463500|ref|YP_001797613.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193038|gb|ACB43999.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 393

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 220/391 (56%), Gaps = 10/391 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVG--QENFIQSFLTEMQ 60
           L++  N +T      L +Y+H+P+C KKCPYCDFNSH +++ K G  +  +I++ + +++
Sbjct: 2   LNSNSNKVTLSALPPLALYIHFPWCEKKCPYCDFNSHQIKKDKSGFDEARYIKALIADLE 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                T  R + SIF GGGTPSL+  + +  +L  I     +    EIT+EANP SVE  
Sbjct: 62  TELPNTWGRQVHSIFIGGGTPSLLSAEGMDQLLCAIRARINLEPAAEITMEANPGSVEAE 121

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F G+ +AG+NR+SLG+QS +++ L+ LGR HN  EA  AI +A   F  ++ DL+Y LP
Sbjct: 122 KFAGFAEAGINRVSLGIQSFQDEQLKALGRIHNGEEAKCAIQIALRHFKSVNLDLMYGLP 181

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+   + +++ ALS+   HLS Y LT+E  T F          LPSE+    +     
Sbjct: 182 NQTLELAKADIETALSFKTHHLSFYNLTLEPNTYFASFPPK----LPSEDEIDAIQEQNL 237

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G   YE+S ++    E  HNLNYWR+GDYIGIG GAH +V           E+ 
Sbjct: 238 DLLTKAGYQHYEVSAYAHKNQECKHNLNYWRFGDYIGIGAGAHGKVSYPDRITRQVRERQ 297

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE- 359
           PE+++  +   G+A++E   ++++    EF++  LRL++G+    +    G  L++  + 
Sbjct: 298 PEAYMTAMESKGNALIENREIAAKDLPFEFMLNALRLKDGVDTSTFSERTGLPLNVISKG 357

Query: 360 -RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                ++G ++    +RL+ T  G+  L+++
Sbjct: 358 LGEASKKGLLDE-NPNRLKATAMGIRYLNNL 387


>gi|325922289|ref|ZP_08184070.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas gardneri
           ATCC 19865]
 gi|325547242|gb|EGD18315.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas gardneri
           ATCC 19865]
          Length = 385

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 199/337 (59%), Gaps = 7/337 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDNDLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I   L   A     + N+EIT+E NP + E   F GY  AGVNR+S GV
Sbjct: 68  GGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFDGYLAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H+++EA  AI LA++  +   + DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLAQAERDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T+F+     G   +P ++ A D+    Q + +  G   YE+S +
Sbjct: 188 LQPTHMSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQRLLADAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+S+L     N  +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEQHVLRRWKHKHPQSYLASA-GNAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   E +   +   E+++  LRL EG  + D+E   G
Sbjct: 304 IGGDEVVPRARLPFEYMLNVLRLHEGFRLSDFEASTG 340


>gi|291612876|ref|YP_003523033.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
 gi|291582988|gb|ADE10646.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
          Length = 399

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 203/329 (61%), Gaps = 5/329 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Q    L +Y+H P+CV+KCPYCDFNSH  R  + ++ ++ + + +++    L   R + +
Sbjct: 19  QALPPLSLYIHIPWCVRKCPYCDFNSHAARGAIPEKQYVAALVRDLEMALPLIWGRKVYT 78

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+  + +A IL  +     +  N EIT+EANP +VE + F  +R+AGVNR+
Sbjct: 79  VFFGGGTPSLLSGEVLAEILRQVRMLLPLDINAEITLEANPGTVEADKFARFREAGVNRL 138

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG+QS  +  L+ LGR H+++EA +AI +A+  F  ++ DL+YALP+QT+ +   ++Q 
Sbjct: 139 SLGIQSFNDTHLQALGRIHSSAEARSAIGIAQQHFDNINLDLMYALPQQTLEEALQDVQT 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL Y   HLS Y LT+E  TLF   H+     LP ++ + D+    +++ + HG   YE 
Sbjct: 199 ALQYRPQHLSCYHLTLEPNTLF--AHQPPP--LPDDDASSDMQLAIEALLATHGYQHYET 254

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S  +  G  S HNLNYW++GDY+GIG GAHS++      +  +  K P+++++ V + G 
Sbjct: 255 SAFAQPGRRSRHNLNYWQFGDYLGIGAGAHSKLSFHDKVLRQARYKQPQAYMEAVAR-GE 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            V ++  ++  + A EF+M  LRL EG  
Sbjct: 314 PVQDEHEVAHAELAFEFMMNALRLNEGFD 342


>gi|73542165|ref|YP_296685.1| coproporphyrinogen III oxidase [Ralstonia eutropha JMP134]
 gi|72119578|gb|AAZ61841.1| coproporphyrinogen III oxidase, anaerobic [Ralstonia eutropha
           JMP134]
          Length = 413

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 217/383 (56%), Gaps = 15/383 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPR 69
           GS  L +YVH P+CV+KCPYCDFNSH    K G     ++ ++ +   +++    L   R
Sbjct: 31  GSPPLSLYVHVPWCVRKCPYCDFNSHAVPGKDGSHDIPEDAYLDALRADLEQSLPLVWGR 90

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  YR +G
Sbjct: 91  PVHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEANPGTFEAERFASYRASG 150

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+S+G+QS  +  L+ LGR H   EA AAI +A+  F  ++ DL+YALP QT+ Q   
Sbjct: 151 VNRLSIGIQSFNDSHLQALGRIHGEREARAAIDIAQRSFDNVNLDLMYALPGQTLEQCRS 210

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ ALSY   HLSLY LT+E  TLF K        LP +++A ++ +L ++ T+  G  
Sbjct: 211 DLESALSYGTTHLSLYHLTLEPNTLFAKFPP----ALPDDDLAYEMQDLIEARTTEAGYR 266

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE S ++    E+ HNLNYWR+GDY+GIG GAH ++   +  +     KHP +++    
Sbjct: 267 HYETSAYARAHREARHNLNYWRFGDYLGIGAGAHGKLSFPNRILRQMRHKHPATYMAQAM 326

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
             G+AV E   + +++   EF++  LRL +G+    +  + G  L     R L   +++G
Sbjct: 327 A-GNAVQEAREVGADELPFEFMLNALRLTDGVPASSFHDMTGLPLHA-ISRQLAAAEKKG 384

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
            ++    + +R T+ G   L+ +
Sbjct: 385 LLD-ADPTVIRPTELGRRFLNDL 406


>gi|332289357|ref|YP_004420209.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
 gi|330432253|gb|AEC17312.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
          Length = 378

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 138/377 (36%), Positives = 211/377 (55%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH ++  + Q+ +IQ  L ++         R + SIF GG
Sbjct: 6   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPQQQYIQHLLADLDQQLDFVQQRQLHSIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   ++IA +L  IA+    S N+EIT+EANP + E   F GYR+AGV R+S+GVQ
Sbjct: 66  GTPSLFSAESIAFLLAQIAQRIPFSQNIEITLEANPGTAEAERFLGYRQAGVTRLSMGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +Q L+ LGR HN++EA  A+  A+   F R + DL++ LP Q++     +L +A++ 
Sbjct: 126 SFHDQQLQLLGRIHNSNEAKKAVDFAKAAGFERFNLDLMHGLPNQSVDSALSDLAQAIAL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  TLF          LP ++    ++        A G   YE S ++
Sbjct: 186 APPHLSWYQLTIEPNTLFASKPPR----LPDDDDLWQIFEAGHQKLLAAGYQQYETSAYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+ IG GAH +V     ++   S  KHP+ +L+     G    
Sbjct: 242 KPGFQCEHNLNYWRFGDYLAIGCGAHGKVSFSDGQILRYSQTKHPKGYLQ-----GQYRY 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
           ++ ++  + +  EF M   RL E +   D+E   G  L++   + +  L++   +ER + 
Sbjct: 297 QQHYVEWQDRPFEFFMNRFRLLEAVPKADFERFTGLGLNVIEKQIDEALKQDYIVERTE- 355

Query: 374 SRLRCTQRGMTMLDSVI 390
              + T+ G   L+ ++
Sbjct: 356 -SWQITEHGKLFLNDLL 371


>gi|260775572|ref|ZP_05884469.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608753|gb|EEX34918.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 392

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/336 (40%), Positives = 196/336 (58%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  +  + ++ +I + L    T+++  +    PR++ S
Sbjct: 8   ALSLYVHIPWCVQKCPYCDFNSHALKADIPEQEYIAALLEDLDTDIERYQLKANPRALHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  Q I+ +L GI K       +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 68  IFIGGGTPSLISAQGISDLLAGIEKRIAFKDEIEITMEANPGTIEAERFAGYRKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP QT+ Q  M+L+
Sbjct: 128 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHKIGLNSFNLDLMHGLPDQTVEQALMDLE 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+F+        VLP ++   D++ L     +  G   YE
Sbjct: 188 KAIELNPPHLSWYQLTIEPNTMFHYKPP----VLPDDDDLWDIFELGHQKLAEAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S    +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +  
Sbjct: 244 ISGYSKPEYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQNM 303

Query: 312 GHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDW 346
               ++ E  ++SE +  EF M   RL E    +D+
Sbjct: 304 VKPYLDSEADVASEDRPFEFFMNRFRLMEACPKQDF 339


>gi|331084368|ref|ZP_08333472.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330401632|gb|EGG81213.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 381

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/350 (37%), Positives = 209/350 (59%), Gaps = 6/350 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              LG+Y+H PFCVKKC YCDF S     +  Q+ ++ + L+E++  R+      +S+IF
Sbjct: 2   KKDLGLYIHIPFCVKKCEYCDFLSWNAEEEERQQ-YVAALLSEIESYREFAKGYRVSTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++ P+ +  IL  I + + +    EITIE NP +V+    Q Y++ GVNR+S+
Sbjct: 61  IGGGTPSVLLPKQMEDILQKIYEIFELERRAEITIEVNPGTVDEEKLQCYKENGVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS++++ LR LGR H   E + +  LAR   F  +S DLI ++P QT+ +W+ EL+ A
Sbjct: 121 GLQSVKDEKLRLLGRIHTYQEFVESYELARKAGFDNISIDLISSVPGQTLQEWKEELETA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +   +H+S+YQL IE+GT FY+ + +   +LP E  + ++Y  T       G   YEIS
Sbjct: 181 AAQNPEHISVYQLIIEEGTPFYEKYAEHPELLPDEETSREIYLWTGKFLKEAGYEQYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G ES HNL YW  GDY+G+G GA S V+     + +S  K   ++L+   K    
Sbjct: 241 NYAKPGKESRHNLKYWERGDYLGLGLGAASMVR----NIRMSNTKDMRTYLERCDKPKTM 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
             + +FL   +Q +EF+ +GLR   G+S K+++ + GR +D+  E+ L +
Sbjct: 297 REDVQFLEEPRQMEEFMFLGLRKTRGVSKKEFKRIFGREMDMVYEKALHK 346


>gi|315181251|gb|ADT88165.1| hypothetical oxygen-independent coproporphyrinogen III oxidase
           [Vibrio furnissii NCTC 11218]
          Length = 390

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/388 (38%), Positives = 211/388 (54%), Gaps = 26/388 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  +  + +  +I + L ++       QL G PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKADIPETEYIDALLEDLDTDIERYQLAGDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P  I  +L GI        ++EIT+EANP ++E   F GYR+ GV RI
Sbjct: 66  IFIGGGTPSLISPDGIGRLLRGIEARIAFKPDIEITMEANPGTIEAERFAGYRQVGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT+ Q   +L+
Sbjct: 126 SIGVQSFEPEKLTRLGRIHGRDEAVKAAQLAHQIGLNSFNLDLMHGLPDQTLEQALADLE 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+  A  HLS YQLTIE  TLFY         LP ++   D++ L     +A G   YE
Sbjct: 186 SAIELAPPHLSWYQLTIEPNTLFYFKPP----TLPDDDALWDIFELGHQKLTAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +  
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQN- 300

Query: 312 GHAVVEKEFLSSEQQ-AD-----EFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR- 364
               + K +L SEQ  AD     EF M   RL E     D+    G  + +  +  L R 
Sbjct: 301 ----LAKPYLDSEQLVADVDRPFEFFMNRFRLIEPCPKADFSATTGLPISV-IQPTLDRA 355

Query: 365 --QGFIERVQFSRLRCTQRGMTMLDSVI 390
             Q F+   + +  + T++G   L+ ++
Sbjct: 356 IEQEFLSETE-THWQITEKGKLFLNDLL 382


>gi|296476503|gb|DAA18618.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Bos taurus]
          Length = 442

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/340 (38%), Positives = 199/340 (58%), Gaps = 6/340 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           GS    +YVHWP+C K+C YC+FN ++ R  V +    +  + E Q + +L+G R + S+
Sbjct: 36  GSQRAALYVHWPYCEKRCSYCNFNKYIPR-GVDEAALRRCLVIEAQTLLRLSGVRRVESV 94

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S
Sbjct: 95  FFGGGTPSLASPHTVAAVLEAVAQAAHLPADSEVTLEANPTSASGSRLAAFGAAGVNRLS 154

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL++  L+ LGR H+A +A+  +  A+ +FP R+S DL+  LP Q +  W  +LQ 
Sbjct: 155 IGLQSLDDTELQLLGRTHSARDALQTLAEAQRLFPGRVSVDLMLGLPAQQVGPWLRQLQG 214

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+
Sbjct: 215 LLRCCDDHVSLYQLSLERGTTLFTQVQQGALPAPDPELAAEMYQEGRAVLREAGFRQYEV 274

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVR 309
           SN +  GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P+SW+K V 
Sbjct: 275 SNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFIPQGAGGHTREARIQTLEPDSWMKEVM 334

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             GH    +  LS  +  +E L MGLR   GI+ + W+  
Sbjct: 335 LFGHGTRRRVPLSELELLEEVLAMGLRTDVGITHQHWQQF 374


>gi|269960450|ref|ZP_06174823.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           harveyi 1DA3]
 gi|269834877|gb|EEZ88963.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           harveyi 1DA3]
          Length = 390

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 193/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T+++  R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQRKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++  G  R+  + + KHP  +L   +  
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFGDGRIVRTTKVKHPRGYLMAYQNM 301

Query: 312 GHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDW 346
               ++ E  ++ E +  EF M   RL E    +D+
Sbjct: 302 VKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDY 337


>gi|254230231|ref|ZP_04923623.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           sp. Ex25]
 gi|262393223|ref|YP_003285077.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
 gi|151937263|gb|EDN56129.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           sp. Ex25]
 gi|262336817|gb|ACY50612.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
          Length = 392

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/347 (40%), Positives = 196/347 (56%), Gaps = 17/347 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T+++  R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAGRFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++ L     +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFELGHQKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWL----KM 307
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L     M
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQNM 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V+   H    +  ++ E +  EF M   RL E    +D+    G  L
Sbjct: 302 VKPYLHT---EHVVADEDRPFEFFMNRFRLMEACPKQDYVDTTGLPL 345


>gi|148224309|ref|NP_001091605.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Bos taurus]
 gi|187611408|sp|A5D7B1|RSAD1_BOVIN RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|146186779|gb|AAI40492.1| RSAD1 protein [Bos taurus]
          Length = 442

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/340 (38%), Positives = 199/340 (58%), Gaps = 6/340 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           GS    +YVHWP+C K+C YC+FN ++ R  V +    +  + E Q + +L+G R + S+
Sbjct: 36  GSQRAALYVHWPYCEKRCSYCNFNKYIPR-GVDEAALRRCLVIEAQTLLRLSGVRRVESV 94

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S
Sbjct: 95  FFGGGTPSLASPHTVAAVLEAVAQAAHLPADSEVTLEANPTSASGSRLAAFGAAGVNRLS 154

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL++  L+ LGR H+A +A+  +  A+ +FP R+S DL+  LP Q +  W  +LQ 
Sbjct: 155 IGLQSLDDTELQLLGRTHSARDALQTLAEAQRLFPGRVSVDLMLGLPAQQVGPWLRQLQG 214

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+
Sbjct: 215 LLRCCDDHVSLYQLSLERGTTLFTQVQQGALPAPDPELAAEMYQEGRAVLREAGFRQYEV 274

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVR 309
           SN +  GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P+SW+K V 
Sbjct: 275 SNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFIPQGAGGHTREARIQTLEPDSWMKEVM 334

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             GH    +  LS  +  +E L MGLR   GI+ + W+  
Sbjct: 335 LFGHGTRRRVPLSELELLEEVLAMGLRTDVGITHQHWQQF 374


>gi|299529925|ref|ZP_07043353.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Comamonas testosteroni S44]
 gi|298722097|gb|EFI63026.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Comamonas testosteroni S44]
          Length = 409

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 132/376 (35%), Positives = 220/376 (58%), Gaps = 12/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           L +YVH P+C+KKCPYCDFNSH   +   + ++ +I + + +++    L   R++ S+F 
Sbjct: 36  LSLYVHLPWCLKKCPYCDFNSHAWAKGDALPEDRYIDALMADLESALPLIWGRTVHSVFM 95

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P++I  ++ G+     +  + EIT+EANP + E + F+ +R AGVNR+S+G
Sbjct: 96  GGGTPSLFSPESIDKLIAGLRARLRMEPDCEITMEANPGTFEKDRFKAFRAAGVNRLSIG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS +++ L+ +GR H+A++A AA+  A + F   + DL+YALP Q+M   + ++  ALS
Sbjct: 156 VQSFDDRYLQAVGRVHDAAQAQAAVREAADNFETFNIDLMYALPGQSMVDLQRDVDTALS 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLS+Y LTIE  T F K       V+P ++ A ++ +L  + T A G+  YE+S +
Sbjct: 216 FAPPHLSIYHLTIEPNTYFAKYPP----VVPEDDTAYEMLDLITASTRAAGMQRYEVSAY 271

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HN NYW++GDY+GIG GAHS++   +HR+   +  + P  ++ M    G  +
Sbjct: 272 AKDGHQCFHNSNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRFRDPARYIDMALA-GTPL 329

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQF 373
            +   +       E+++  LRLR G +++++    G  +    +     Q +G I R   
Sbjct: 330 AQDNEVKRADLPFEYMLNALRLRGGFALQEFMERTGLPMSAIAKGLDQAQAKGLISR-DL 388

Query: 374 SRLRCTQRGMTMLDSV 389
            R+  T+RG   L  +
Sbjct: 389 GRVVPTERGFDFLSDL 404


>gi|156975839|ref|YP_001446746.1| coproporphyrinogen III oxidase [Vibrio harveyi ATCC BAA-1116]
 gi|156527433|gb|ABU72519.1| hypothetical protein VIBHAR_03584 [Vibrio harveyi ATCC BAA-1116]
          Length = 390

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 192/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T+++  R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +  
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLMAYQNM 301

Query: 312 GHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDW 346
               ++ E  ++ E +  EF M   RL E    +D+
Sbjct: 302 VKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDY 337


>gi|153835258|ref|ZP_01987925.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           harveyi HY01]
 gi|148868233|gb|EDL67373.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           harveyi HY01]
          Length = 390

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 192/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T+++  R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +  
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLMAYQNM 301

Query: 312 GHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDW 346
               ++ E  ++ E +  EF M   RL E    +D+
Sbjct: 302 VKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDY 337


>gi|91228693|ref|ZP_01262607.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
 gi|91187764|gb|EAS74082.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
          Length = 392

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/347 (40%), Positives = 196/347 (56%), Gaps = 17/347 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T+++  R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAQLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++ L     +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFELGHQKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWL----KM 307
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L     M
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQNM 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V+   H    +  ++ E +  EF M   RL E    +D+    G  L
Sbjct: 302 VKPYLHT---EHVVADEDRPFEFFMNRFRLIEACPKQDYVDTTGLPL 345


>gi|260590052|ref|ZP_05855965.1| putative oxygen-independent coproporphyrinogen III oxidase [Blautia
           hansenii DSM 20583]
 gi|260539564|gb|EEX20133.1| putative oxygen-independent coproporphyrinogen III oxidase [Blautia
           hansenii DSM 20583]
          Length = 381

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 132/353 (37%), Positives = 210/353 (59%), Gaps = 12/353 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSIS 72
              LG+Y+H PFCVKKC YCDF S    +  G+E    ++ + L+E++  R+      +S
Sbjct: 2   KKDLGLYIHIPFCVKKCEYCDFLS----WNAGEEERQQYVAALLSEIESYREFAKGYRVS 57

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IF GGGTPS++ P+ +  IL  I + + +    EIT+E NP +V+    Q Y++ GVNR
Sbjct: 58  TIFIGGGTPSVLLPKQMEDILQKIYEIFELERRPEITVEVNPGTVDEEKLQCYKENGVNR 117

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS++++ LR LGR H   E + +  LAR   F  +S DLI ++P QT+ +W+ EL
Sbjct: 118 LSMGLQSVKDEKLRLLGRIHTYQEFVESYELARKAGFDNISIDLISSVPGQTLQEWKEEL 177

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A +   +H+S+YQL IE+GT FY+ + +   +LP E  + ++Y  T       G   Y
Sbjct: 178 ETAAAQNPEHISVYQLIIEEGTPFYEKYAEHPELLPDEETSREIYLWTGKFLKEAGYGQY 237

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G ES HNL YW  GDY+G+G GA S V+     + +S  K   ++L+   K 
Sbjct: 238 EISNYAKPGKESRHNLKYWERGDYLGLGLGAASMVR----NIRMSNTKDMRTYLERCDKP 293

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
                + +FL   +Q +EF+ +GLR   G+S K+++ + GR +D+  E+ L +
Sbjct: 294 KTMREDVQFLEEPRQMEEFMFLGLRKTRGVSKKEFKRIFGREMDMVYEKALHK 346


>gi|261210032|ref|ZP_05924330.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
 gi|260840797|gb|EEX67339.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
          Length = 391

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/346 (39%), Positives = 196/346 (56%), Gaps = 11/346 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++    +  +    PR + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKDDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L G+A+  T    +EIT+EANP ++E   F GYR AGV RI
Sbjct: 66  IFIGGGTPSLISAEGIARLLQGVAERITFKPGIEITMEANPGTIEAQRFAGYRTAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L 
Sbjct: 126 SIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP E+   D++ L     +  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLNDAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +   
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFTDGRIVRTTKTKHPRGYLAALNNL 301

Query: 312 GHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
             A ++ E L ++Q    EF M   RL E     D+    G  +++
Sbjct: 302 AKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEV 347


>gi|300311451|ref|YP_003775543.1| anaerobic coproporphyrinogen III oxidase oxidoreductase
           [Herbaspirillum seropedicae SmR1]
 gi|300074236|gb|ADJ63635.1| anaerobic coproporphyrinogen III oxidase oxidoreductase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 414

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 218/375 (58%), Gaps = 10/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH+P+CV+KCPYCDFNSH  +    ++ ++ +   +++    L   R I SIF G
Sbjct: 40  PLSLYVHFPWCVRKCPYCDFNSHEVKDGFPEQEYLDALRLDLEQALPLIWGRKIYSIFIG 99

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     + +++EIT+EANP + E + F+ YR +G+NR+S+G+
Sbjct: 100 GGTPSLLSAAGLDRLLSDLRTLLPLDADIEITMEANPGTFEADKFRSYRDSGINRLSIGI 159

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS     L+ LGR H+  +A  A+ +A   F   + DL+YALP+QT+ Q   ++Q A+ +
Sbjct: 160 QSFNSAHLQALGRIHDGGQAHQAVEIAHANFDNFNLDLMYALPQQTLEQARTDIQTAIDF 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLSLY LT+E  TLF K        +P E+ + D+ ++   +T+  G   YE+S ++
Sbjct: 220 APPHLSLYHLTLEPNTLFAKFPP----AVPDEDTSADMQDMIGELTTQAGYGNYEVSAYA 275

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G  + HNLNYW++GDY+GIG GAHS++    HR+   +  KHP+++L+ ++   H   
Sbjct: 276 QPGRRARHNLNYWQFGDYLGIGAGAHSKLSF-PHRIVRQMRYKHPQAYLQHIKAGTHIQE 334

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNL-QRQGFIERVQFS 374
           E E +  +    EF++  LRL EG     +    G  L+ I  + +L +R+G + R   +
Sbjct: 335 EAE-IGRDALGFEFMLNALRLTEGFPPNLFAERTGLALNQIGKQLDLAERKGMLYR-DHA 392

Query: 375 RLRCTQRGMTMLDSV 389
            +R T  G   L+ +
Sbjct: 393 LIRPTPLGRRFLNDL 407


>gi|319795586|ref|YP_004157226.1| oxygen-independent coproporphyrinogen iii oxidase [Variovorax
           paradoxus EPS]
 gi|315598049|gb|ADU39115.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus EPS]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 218/383 (56%), Gaps = 19/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK-------VGQENFIQSFLTEMQWMRQLTGPRS 70
            L +Y+H P+C++KCPYCDFNSH  R         + +  +I + + ++     L   R+
Sbjct: 37  PLSLYIHLPWCLRKCPYCDFNSHEWRATSAADAEGIPEAAYIDALVADLDAALPLIWGRT 96

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +IF GGGTPSL  PQ I  +L  +     ++ + EIT+EANP + E N F+ YR AGV
Sbjct: 97  VHTIFIGGGTPSLFSPQAIDRLLGDVRARLKLAPDCEITLEANPGTFERNRFRAYRSAGV 156

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            R+S+GVQS  ++ L  LGR H+ ++AIAA+  A + F   + DL+YALP QT+   E +
Sbjct: 157 TRLSVGVQSFNDEHLTALGRVHDRAQAIAAVEEAASAFDTFNLDLMYALPGQTLEHLEAD 216

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+ A  H+S+Y LTIE  T F K        LP +++A  + +     T   G+  
Sbjct: 217 LSQALALAPPHISVYHLTIEPNTWFAKFPP----TLPEDDIAYAMLDRITERTGEQGMSR 272

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YE+S ++  G +  HNLNYW++GDY+GIG GAHS++   +HR+   +  + P  +++  R
Sbjct: 273 YEVSAYAREGHQCAHNLNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRYREPRLYMENAR 331

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
             G AV + + +S      EF++  LRL+ G ++  +    G  +    +R L   +R+G
Sbjct: 332 A-GAAVSQSDEVSLADLPFEFMLNALRLKAGFTLPQFSERTGLAM-TSIQRGLEEAERKG 389

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
            + R  F R+  T+RG+  L  +
Sbjct: 390 LVARDLF-RVWPTERGLDFLSDL 411


>gi|186475431|ref|YP_001856901.1| coproporphyrinogen III oxidase [Burkholderia phymatum STM815]
 gi|184191890|gb|ACC69855.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phymatum STM815]
          Length = 404

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 219/377 (58%), Gaps = 11/377 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +YVH+P+CV+KCPYCDFNSH  +     E+ ++ +  ++++    L   R + ++F G
Sbjct: 29  LALYVHFPWCVRKCPYCDFNSHESKGGTFPEDEYLDALRSDLERSLPLVWGRQVHTVFIG 88

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G+
Sbjct: 89  GGTPSLMSAKGLDRLLSDVRALLPLDADAEITLEANPGTFEAEKFAQFRASGVNRLSVGI 148

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  E  L+ LGR H++++A  A+ +A N F   + DL++ALPKQT+ + + +++ ALSY
Sbjct: 149 QSFNEAHLKALGRIHDSTQARHAVEVAANTFGNFNLDLMFALPKQTLAECQADIETALSY 208

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLSLY LT+E  TLF K        LP ++ + D+ +     T   G   YE+S ++
Sbjct: 209 APPHLSLYHLTLEPNTLFAKFPPP----LPDDDSSADMQDWIHERTREAGYERYEVSAYA 264

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNLNYWR+GDY+GIG GAH+++   +  +     KHP ++++  R +G+AV E
Sbjct: 265 KPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQMRYKHPATFIEEAR-SGNAVQE 323

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           +  + +     EF++  LRL EG  V  +    G  +    E  LQ   R+G I R  F 
Sbjct: 324 EHEVGARDLPFEFMLNALRLVEGFPVHRFIERTGLPI-TSIEPALQEAERRGLITR-DFE 381

Query: 375 RLRCTQRGMTMLDSVIA 391
           ++  T  G   L+ + A
Sbjct: 382 KIAPTPLGQAFLNDLQA 398


>gi|332970354|gb|EGK09346.1| oxygen-independent coproporphyrinogen III oxidase [Kingella kingae
           ATCC 23330]
          Length = 386

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 197/324 (60%), Gaps = 4/324 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH  +  + +  +IQ+ LT++Q        R I +IF GG
Sbjct: 12  LSLYIHIPWCIQKCPYCDFNSHKIKTTLDENAYIQALLTDLQSELPYFWGRPIDTIFIGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+   + I  +L GI     ++   EIT+EANPS+ E++ FQG++ AG+NR+S+GVQ
Sbjct: 72  GTPSVFSAKAIDQLLSGIRALVKLNPETEITLEANPSTFEIDKFQGFKDAGINRLSIGVQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ LGR HNA EA  AI +A  IF R++ DL+YALP QT+     +++ A+++ 
Sbjct: 132 SFDDAKLKTLGRIHNAHEAKNAIEVATQIFERVNIDLMYALPHQTVQAACDDIRTAIAFG 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS- 257
             H+S YQLT+E  T F      G   LP ++ A D+ +   +  +  G   YE S  + 
Sbjct: 192 TTHISAYQLTLEPNTPFGHTPPQG---LPEDDNAQDIEDAIHAELAQAGFVQYETSAFAK 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ++ HN+NYW++GDYIGIG GAH ++         + ++HP  +L  ++ N H  +E
Sbjct: 249 SPNQQARHNVNYWQFGDYIGIGAGAHGKLSHHDRIERTTRKRHPSDYLLAMQTNPHDAIE 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGI 341
           ++ ++ +    EF+M  LRL +G+
Sbjct: 309 RKMVAPQDLPFEFMMNALRLVDGV 332


>gi|28198630|ref|NP_778944.1| coproporphyrinogen III oxidase [Xylella fastidiosa Temecula1]
 gi|182681313|ref|YP_001829473.1| coproporphyrinogen III oxidase [Xylella fastidiosa M23]
 gi|28056714|gb|AAO28593.1| coproporphyrinogen III oxidase [Xylella fastidiosa Temecula1]
 gi|182631423|gb|ACB92199.1| oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa M23]
 gi|307579764|gb|ADN63733.1| coproporphyrinogen III oxidase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 383

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 217/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F G
Sbjct: 6   PLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVFLG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L  +A    ++ + EIT+E NP + E   F  Y  AG+NR+S G+
Sbjct: 66  GGTPSLFPPEAIDRFLQIVAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSFGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA +
Sbjct: 126 QSFNDAALRRLGRIHDSLQAEQAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRAFA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+FY     G   +P ++ A ++   TQ + +  G   YE+S +
Sbjct: 186 LAPTHLSYYQLTLEPNTVFYARPPQG---IPDDDAAWEMQEHTQRLLAEAGYQHYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L        A
Sbjct: 243 AREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDNA-GTVSA 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE---RV 371
           +   E + + +   E+++  LRLREG  ++D+ +  G  L +E      R+       R 
Sbjct: 302 IGGDEIVPTARLPFEYMLNLLRLREGFRLQDFAVRTG--LTVESIHAALREAVARGWLRC 359

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +   +  T+ G+   + VI
Sbjct: 360 ELEHVIPTELGLRFANDVI 378


>gi|296315022|ref|ZP_06864963.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria polysaccharea ATCC 43768]
 gi|296838225|gb|EFH22163.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria polysaccharea ATCC 43768]
          Length = 391

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETNPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|269965739|ref|ZP_06179836.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           alginolyticus 40B]
 gi|269829607|gb|EEZ83844.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           alginolyticus 40B]
          Length = 392

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/347 (40%), Positives = 196/347 (56%), Gaps = 17/347 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T+++  R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++ L     +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFELGHQKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWL----KM 307
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L     M
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQNM 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V+   H    +  ++ E +  EF M   RL E    +D+    G  L
Sbjct: 302 VKPYLHT---EHVVADEDRPFEFFMNRFRLIEACPKQDYVDTTGLPL 345


>gi|254508606|ref|ZP_05120722.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
 gi|219548457|gb|EED25466.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
          Length = 391

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/387 (38%), Positives = 221/387 (57%), Gaps = 24/387 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQL-TGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH ++  + ++ +I + L +++      QL + PR + S
Sbjct: 8   ALSLYVHIPWCVQKCPYCDFNSHAQKAVIPEKEYIAALLQDLEADIERYQLESNPRLLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  Q IA +L GI        ++EIT+EANP ++E   F GY+KAGV RI
Sbjct: 68  IFIGGGTPSLISAQGIAELLSGIEARLPFKPDIEITMEANPGTIEAERFAGYQKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L+
Sbjct: 128 SVGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSVDQALADLE 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TLFY         LP ++   D++ L     +  G   YE
Sbjct: 188 KAIALDPPHLSWYQLTIEPNTLFYYKQP----TLPDDDDLWDIFELGHQKLADAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP+ +L     +
Sbjct: 244 ISGYSKPGFQCQHNLNYWRFGDYLGIGCGAHGKISFRDGRIVRTTKIKHPKGYL-----D 298

Query: 312 GHAVVEKEFLSSEQQ--AD----EFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQ- 363
            +  + K +L+SE++  AD    EF M   RL E    +D+    G   + I+   N   
Sbjct: 299 AYDNMVKPYLNSEEEVAADDRPFEFFMNRFRLLEACPKQDFLDTTGLGFEAIQATMNWAI 358

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
             G+I+    +  + T++G   L+ ++
Sbjct: 359 EMGYIDESD-THWQITEKGKLFLNDLL 384


>gi|313199821|ref|YP_004038479.1| oxygen-independent coproporphyrinogen iii oxidase [Methylovorus sp.
           MP688]
 gi|312439137|gb|ADQ83243.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           MP688]
          Length = 405

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 204/374 (54%), Gaps = 16/374 (4%)

Query: 8   ENNMTGQGSNS-------LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           EN + GQ ++S       L +Y+H P+CV+KCPYCDFNSH  R  + +  ++ + + +++
Sbjct: 14  ENPLVGQLTSSGLRNPPPLSLYIHIPWCVRKCPYCDFNSHESRNPIPESTYVDALIADLE 73

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L   R + SIFFGGGTPSL   ++I  IL  +     +    EIT+EANP + E  
Sbjct: 74  QATPLVWGRKVRSIFFGGGTPSLFSAESIDRILSHVRMLTPLEYEAEITLEANPGTFEAE 133

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F GYR AGVNRIS+G+QS   + L+ LGR HN+ EA  A   A  IF  ++ DL+YALP
Sbjct: 134 RFAGYRDAGVNRISIGIQSFNPRHLQALGRIHNSEEAQYAAEHAIKIFGNVNLDLMYALP 193

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT+ +   +++ A++    H+S Y LT+E  T FY         LP ++ +  +    +
Sbjct: 194 EQTLEEALQDMRTAIALGPTHISAYHLTLEPNTPFYYKPP----ALPDDDTSATMQEAIE 249

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + + HG   YE S     G    HNLNYW +GDY+GIG GAHS++      +  S  K 
Sbjct: 250 HLLAEHGYSHYETSAFGKAGKRCRHNLNYWVFGDYLGIGAGAHSKLSFHDRILRQSRIKQ 309

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P +++K V + GH + E+  L       EF+M  LRL EG     +  + G+ L    E 
Sbjct: 310 PNAYMKAVAETGH-IEEERLLDRSDLGFEFMMNALRLTEGFDPMLFTTMTGQALST-VEP 367

Query: 361 NLQ---RQGFIERV 371
            LQ   ++G I R 
Sbjct: 368 ALQQAEQRGLITRT 381


>gi|264679918|ref|YP_003279827.1| oxygen-independent coproporphyrinogen [Comamonas testosteroni
           CNB-2]
 gi|262210433|gb|ACY34531.1| putative oxygen-independent coproporphyrinogen [Comamonas
           testosteroni CNB-2]
          Length = 409

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 220/376 (58%), Gaps = 12/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           L +YVH P+C+KKCPYCDFNSH   +   + ++ +I + + +++    L   R++ S+F 
Sbjct: 36  LSLYVHLPWCLKKCPYCDFNSHAWAKGDALPEDRYIDALMADLESALPLIWGRTVHSVFM 95

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P+++  ++ G+     +  + EIT+EANP + E + F+ +R AGVNR+S+G
Sbjct: 96  GGGTPSLFSPESMDKLIAGLRARLRMEPDCEITMEANPGTFEKDRFKAFRAAGVNRLSIG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS +++ L+ +GR H+A++A AA+  A + F   + DL+YALP Q+M   + ++  ALS
Sbjct: 156 VQSFDDRYLQAVGRVHDAAQAQAAVREAADNFETFNIDLMYALPGQSMVDLQRDVDTALS 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLS+Y LTIE  T F K       V+P ++ A ++ +L  + T A G+  YE+S +
Sbjct: 216 FAPPHLSIYHLTIEPNTYFAKYPP----VVPEDDTAYEMLDLITASTRAAGMQRYEVSAY 271

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HN NYW++GDY+GIG GAHS++   +HR+   +  + P  ++ M    G  +
Sbjct: 272 AKDGHQCFHNSNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRFRDPARYMDMALA-GTPL 329

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQF 373
            +   +       E+++  LRLR G +++++    G  +    +     Q +G I R   
Sbjct: 330 AQDNEVKRADLPFEYMLNALRLRGGFALQEFMERTGLPMSAIAKGLDQAQAKGLISR-DL 388

Query: 374 SRLRCTQRGMTMLDSV 389
            R+  T+RG   L  +
Sbjct: 389 GRVVPTERGFDFLSDL 404


>gi|148550176|ref|YP_001270278.1| coproporphyrinogen III oxidase [Pseudomonas putida F1]
 gi|148514234|gb|ABQ81094.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas putida F1]
          Length = 391

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 215/378 (56%), Gaps = 14/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L GI +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSANALGRLLRGIEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLEALGRIHNGDEAVRAADMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+    +    LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMAEHGYRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR--KNGH 313
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+  + + + P+ +L + +  K G 
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKPFKAG- 312

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQ 372
               ++ L  ++   EFLM  LRL +G+  + +    G  L  ++  R    Q  + +V+
Sbjct: 313 ----EKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLSQLQEARPAAEQKGLLQVE 368

Query: 373 FSRLRCTQRGMTMLDSVI 390
             RL  T RG   L+ ++
Sbjct: 369 PDRLVATPRGQLFLNDLL 386


>gi|284007797|emb|CBA73657.1| oxygen-independent coproporphyrinogen III oxidase [Arsenophonus
           nasoniae]
          Length = 370

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/379 (36%), Positives = 228/379 (60%), Gaps = 18/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           + +YVH P+CV+KCPYCDFNSH  + ++ Q+ ++   LT++Q  + Q+ G R ++SIF G
Sbjct: 1   MSLYVHIPWCVQKCPYCDFNSHALKGELPQQEYVTHLLTDLQADLAQIKG-RQVNSIFIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++ + +  +LDGI +   ++S+ EIT+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 60  GGTPSLLDAKAMQSLLDGIRQRLLLASDAEITMEANPGTVEADRFSQYQQAGINRISIGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EAI A  LA  +  R  + DL++ LP QT+ Q   +LQ+A+ 
Sbjct: 120 QSFAADKLTKLGRIHGPEEAIQAASLASALNLRSFNLDLMHGLPDQTLEQALSDLQQAID 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  H+S YQLTIE  T F         +LP+++   D+++    + +  G   YEIS +
Sbjct: 180 LSPPHISWYQLTIEPNTHFGSCPP----ILPNDDALWDIFSQGHQLLNKAGYQQYEISGY 235

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  ++      G  +
Sbjct: 236 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKISFADGRILRTMKTKHPRGYM-----TGQYL 290

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVK---DWEMLAGRNLDIECERNLQRQGFIERVQ 372
            +++ ++   +  EF M   RL EG++ +   D+  LA   +  + ++ L+ QG+I   +
Sbjct: 291 YQQQGVNQSDRPFEFFMNRFRLLEGVARQEFIDYTGLAENVIRHQLDKALE-QGYITETK 349

Query: 373 FSRLRCTQRGMTMLDSVIA 391
            S  + T++G   L+S++ 
Sbjct: 350 -SHWQITEQGKLFLNSLLT 367


>gi|149909461|ref|ZP_01898116.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
 gi|149807571|gb|EDM67520.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
          Length = 395

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/342 (41%), Positives = 192/342 (56%), Gaps = 16/342 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH ++ K+ ++ +I   L +++        RS+ SIF GG
Sbjct: 23  LSLYVHIPWCVQKCPYCDFNSHTQKGKIPEDEYIADLLADLRSELPRVFQRSLHSIFIGG 82

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSLI  + I  ILDGI      S N+EIT+EANP +VE N F GY  AGVNRIS+GVQ
Sbjct: 83  GTPSLISAEGIGKILDGIEAMIPFSDNIEITMEANPGTVEANRFHGYVAAGVNRISIGVQ 142

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL+ + L  LGR H+  EAI A ++A  +     + DL++ LP Q +     +L +A+  
Sbjct: 143 SLQAEKLNLLGRIHDPDEAIRAANIASESALNSFNLDLMHGLPHQDLNDALYDLNKAVEL 202

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE+ T F+         LP E++  D++    ++ S  G   YEIS ++
Sbjct: 203 APQHLSWYQLTIEQNTQFHSKPP----TLPDEDILWDIFEQGHALLSEAGYEQYEISGYA 258

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI--SIEKHPESWL---KMVRKNG 312
             G +  HNLNYWR+GDYIGIG GAH ++           S  KHP  ++   K    N 
Sbjct: 259 KAGNQCQHNLNYWRFGDYIGIGCGAHGKLTDPETGKIYRRSKVKHPRGYMDADKAFLDNE 318

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           H VV+ E         EF M   RL E    +D+    G  L
Sbjct: 319 HVVVQDEL------PFEFFMNRFRLTEATPKQDFCDFTGLPL 354


>gi|330815845|ref|YP_004359550.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia gladioli BSR3]
 gi|327368238|gb|AEA59594.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia gladioli BSR3]
          Length = 409

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/375 (35%), Positives = 210/375 (56%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +E ++ +   +++        R + +IF 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPEEAYLDALRADLEQALPFVWGRQVHTIFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A + F   + DL++ALPKQT+ Q + +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAASTFDNFNLDLMFALPKQTLAQCQADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K        +P ++ + D+    Q  T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIQERTAQAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 ARPNRQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATYMEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  L          +R+G I R  + 
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLAEGFPVASYAERTGLPLSTIEPALAEAERRGLIAR-DYE 381

Query: 375 RLRCTQRGMTMLDSV 389
           R+  T  G   L+ +
Sbjct: 382 RIAPTPLGQRFLNDL 396


>gi|28899396|ref|NP_799001.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366267|ref|ZP_05778726.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus K5030]
 gi|260878916|ref|ZP_05891271.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AN-5034]
 gi|260898283|ref|ZP_05906779.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus Peru-466]
 gi|260902388|ref|ZP_05910783.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ4037]
 gi|28807632|dbj|BAC60885.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085845|gb|EFO35540.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus Peru-466]
 gi|308090492|gb|EFO40187.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AN-5034]
 gi|308107145|gb|EFO44685.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ4037]
 gi|308113531|gb|EFO51071.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus K5030]
          Length = 392

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/347 (40%), Positives = 196/347 (56%), Gaps = 17/347 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T++   R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYISALLEDLDTDIDKYRLNDAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI        ++EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPDIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQEKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWL----KM 307
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L     M
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQNM 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V+   H    ++ ++ E +  EF M   RL E    +D+    G  L
Sbjct: 302 VKPYLHT---EQLVADEDRPFEFFMNRFRLMEACPKQDYVDTTGLPL 345


>gi|71900256|ref|ZP_00682393.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
 gi|71729969|gb|EAO32063.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
          Length = 383

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 217/379 (57%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F G
Sbjct: 6   PLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVFLG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L  +A    ++ + EIT+E NP + E   F  Y  AG+NR+S G+
Sbjct: 66  GGTPSLFPPEAIDRFLQIVAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSFGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA +
Sbjct: 126 QSFNDAALRRLGRIHDSLQAEHAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRAFA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+FY     G   +P ++ A ++   TQ + +  G   YE+S +
Sbjct: 186 LAPTHLSYYQLTLEPNTVFYARPPQG---IPDDDAAWEMQEHTQRLLAEAGYQHYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L        A
Sbjct: 243 AREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDNA-GTVSA 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE---RV 371
           +   E + + +   E+++  LRLREG  ++D+ +  G  L +E      R+       R 
Sbjct: 302 IGGDEIVPTARLPFEYMLNLLRLREGFRLQDFAVRTG--LTVESIHAALREAVARGWLRC 359

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +   +  T+ G+   + VI
Sbjct: 360 ELEHVIPTELGLRFANDVI 378


>gi|194217113|ref|XP_001499707.2| PREDICTED: similar to Radical S-adenosyl methionine domain
           containing 1 [Equus caballus]
          Length = 412

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/336 (38%), Positives = 200/336 (59%), Gaps = 6/336 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            SLG+   WP+C K+C YC+FN ++ R  V +       +TE Q + QL+G R + S+FF
Sbjct: 8   KSLGLTSSWPYCEKRCSYCNFNKYIPR-GVEEAAMRSCLVTEAQTLLQLSGVRRVDSVFF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P  +A +L+ +A+   + ++ E+T+E NP+S   +    +  AGVNR+S+G
Sbjct: 67  GGGTPSLASPHTVAAVLEAVAQAAHLPADSEVTLEVNPTSAPGSRLAAFGAAGVNRLSIG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           +QSL++  LR LGR H+A++A+  +  AR++FP R+S DL+  LP Q +  W  +L+  L
Sbjct: 127 LQSLDDTELRLLGRTHSANDALRTLAEARHLFPGRVSVDLMLGLPAQQVGPWLGQLRELL 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN
Sbjct: 187 RHCDDHISLYQLSLERGTALFTQVQQGTLPAPDPELAAEMYQEGRAVLREAGFRQYEVSN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKN 311
            +  GA S HN  YW+ G YIG+GPGAH R     VG H     I+   P++W+K V   
Sbjct: 247 FARNGALSTHNWTYWQCGQYIGVGPGAHGRFMPQGVGGHIREARIQTLEPDNWMKEVMLF 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           GH   ++  L   +  +E L MGLR   GI+ + W+
Sbjct: 307 GHGTRKRVPLGELELLEEVLAMGLRTDVGITHQHWQ 342


>gi|260808973|ref|XP_002599281.1| hypothetical protein BRAFLDRAFT_64361 [Branchiostoma floridae]
 gi|229284558|gb|EEN55293.1| hypothetical protein BRAFLDRAFT_64361 [Branchiostoma floridae]
          Length = 381

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 132/351 (37%), Positives = 203/351 (57%), Gaps = 10/351 (2%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           +  + E   + Q +G R ++S+FFGGGTPSL  P  +A++L+ I+++  + ++ E+T+EA
Sbjct: 3   RCLVQETATLLQQSGVRRVNSVFFGGGTPSLALPHTMAVVLETISQHALLPADAEVTLEA 62

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RM 171
           NPSS E +  + ++ AG+NR+SLG+Q+     L  LGR+H+  +++ A+   R +FP R+
Sbjct: 63  NPSSTETDKLREFKTAGINRLSLGIQAFSPPDLHLLGRDHSVEDSLRALQEGRTLFPGRV 122

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DLI+  P QT+  W  ELQ+ALS   DH+SLYQLT+E+GT  ++  +     +P  + 
Sbjct: 123 SIDLIFGRPGQTVEAWRGELQQALSVCDDHVSLYQLTLERGTALFRQVEKKQQTVPDPDT 182

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-- 289
             DLY   +      G   YE+SN +  GAES HNL+YWR   YIG+GPGAH R      
Sbjct: 183 MADLYACARETLQNAGFQQYEVSNFARNGAESSHNLSYWRGKQYIGVGPGAHGRFACKGL 242

Query: 290 --SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW- 346
             + R A      P+ W+  V + GHA  ++  LS     +E LM+GLR  EG++ + W 
Sbjct: 243 GRTDREARIQTLEPQQWMGRVERLGHATAKRTSLSQLDILEEILMLGLRTTEGLANERWV 302

Query: 347 EMLAGRNLDIECERNLQRQGFIE----RVQFSRLRCTQRGMTMLDSVIANL 393
               G +L      ++  QGF+      +  S LR T  G+ +LDS+I +L
Sbjct: 303 RFSGGTSLHDIFGTSVAAQGFVNAGLLELSHSVLRATHTGLAVLDSIIPDL 353


>gi|149192345|ref|ZP_01870550.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148833823|gb|EDL50855.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 389

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/392 (37%), Positives = 213/392 (54%), Gaps = 28/392 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQL---TGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + Q+ +I + L ++   +RQ    +  R + S
Sbjct: 11  PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPQQAYITALLEDLDTDIRQYGLASDSRPLHS 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P+ I  +LDG+ +      ++EIT+EANP ++E   F+ YR  GV RI
Sbjct: 71  IFIGGGTPSLIAPEYIKQLLDGVRERIPFRDDIEITMEANPGTIEAARFEQYRVVGVTRI 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS ++  L  LGR H  SEA+ A  LA  I     + DL++ LP+Q++     +L+
Sbjct: 131 SIGVQSFQQTKLERLGRIHGESEAVNAAKLAHEIGLNSFNLDLMHGLPEQSIDDALSDLK 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  TLFY         LP ++   D++     +    G   YE
Sbjct: 191 QAIELAPPHLSWYQLTIEPNTLFYSKPP----TLPDDDDLWDIFEQGHQMLVEAGYQQYE 246

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L M+   
Sbjct: 247 ISGYSKPDFQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKVKHPRGYLNML--- 303

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQ 363
                 K +L SE   D      EF +   RL E      + +  G NLDI  E  +   
Sbjct: 304 ------KPYLDSETNVDMKDRPFEFFINRFRLLEPCPKVQFTLRTGLNLDIIQEPIKRCL 357

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG+IE  +      T++G   L+ V+    +
Sbjct: 358 EQGYIEETE-EHWIVTEKGKLFLNDVLEQFEL 388


>gi|294789570|ref|ZP_06754805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Simonsiella muelleri ATCC 29453]
 gi|294482507|gb|EFG30199.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Simonsiella muelleri ATCC 29453]
          Length = 387

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 195/326 (59%), Gaps = 4/326 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH  +  + ++ +I + L ++Q        R I +IF GG
Sbjct: 13  LSLYIHIPWCIQKCPYCDFNSHKIKTTLDEQTYINALLVDLQSELPYFWGRQIQTIFIGG 72

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+ +  +I  +L G+     ++   EIT+EANPS+ E N FQG++ AG+NR+S+GVQ
Sbjct: 73  GTPSVFQADSINQLLSGLRALVKLNPEAEITLEANPSTFERNKFQGFKDAGINRLSIGVQ 132

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ LGR HNA+EA AAI  A  IF R++ DL+YALP+QT+     +++ A+   
Sbjct: 133 SFDDTQLKTLGRIHNATEAQAAIETACQIFERVNIDLMYALPRQTVQAALHDVRTAIGLG 192

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS- 257
           V H+S YQLT+E  T F      G   LP ++ A D+ +   +  +  G   YE S  S 
Sbjct: 193 VSHISAYQLTLEPNTPFGHTPPQG---LPEDDAAQDIEDAIHNELANVGFTQYETSAFSK 249

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                + HN+NYW++GDY+GIG GAH ++    H    + ++HP  +L  ++ N +  +E
Sbjct: 250 HPNQRARHNINYWQFGDYVGIGAGAHGKLSHHKHIERTTRKRHPNDYLAAMQHNPNDAIE 309

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV 343
           ++ +       EF+M  LRL +G+  
Sbjct: 310 RKIIQPTDLPFEFMMNALRLVDGVPT 335


>gi|261392962|emb|CAX50547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria meningitidis 8013]
          Length = 391

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGIPAAQIMAQIETARQKGLLETDPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|239817290|ref|YP_002946200.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
 gi|239803867|gb|ACS20934.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
          Length = 419

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 136/382 (35%), Positives = 218/382 (57%), Gaps = 19/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK-------VGQENFIQSFLTEMQWMRQLTGPRSI 71
           L +Y+H P+C++KCPYCDFNSH  R         + +  ++ + + ++     L   R++
Sbjct: 38  LSLYIHLPWCLRKCPYCDFNSHEWRATNEAEAEGIPESAYLDALIADLDAALPLIWGRTV 97

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +IF GGGTPSL  PQ I  +L  +     ++   EIT+EANP + E N F+ YR AGV 
Sbjct: 98  HTIFIGGGTPSLFSPQAIDRLLGDVRARLKLAPECEITLEANPGTFERNRFRAYRSAGVT 157

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S+GVQS  ++ L+ LGR H+ ++AIAA+  A + F   + DL+YALP QT+   + +L
Sbjct: 158 RLSVGVQSFNDEHLKALGRVHDRAQAIAAVEEAASAFDTFNLDLMYALPGQTLEGLDADL 217

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +AL+ A  H+S+Y LTIE  T F K        LP +++A  + +     T+A G+  Y
Sbjct: 218 TQALALAPPHISVYHLTIEPNTRFAKFPP----ALPEDDLAYAMLDRITERTAASGMSRY 273

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK 310
           E+S ++  G    HNLNYW++GDY+GIG GAHS++   +HR+   +  + P  ++   R 
Sbjct: 274 EVSAYARSGHACAHNLNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRFREPRLYMNNARA 332

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGF 367
            G AV + + ++      EF++  LRL+EG ++  +    G  +    ++ L   +R+G 
Sbjct: 333 -GAAVAQSDEVALADLPFEFMLNALRLKEGFTLPQFSERTGLAM-TSIQKGLEEAERKGL 390

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           I R    R+  T+RG+  L  +
Sbjct: 391 IAR-DLHRVWPTERGLDFLSDL 411


>gi|218767786|ref|YP_002342298.1| coproporphyrinogen III oxidase [Neisseria meningitidis Z2491]
 gi|121051794|emb|CAM08100.1| putative porphyrin oxidoreductase [Neisseria meningitidis Z2491]
          Length = 399

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPTAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|254804543|ref|YP_003082764.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha14]
 gi|254668085|emb|CBA04593.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha14]
 gi|254670338|emb|CBA05750.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha153]
 gi|308388850|gb|ADO31170.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha710]
          Length = 391

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|260767471|ref|ZP_05876408.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
 gi|260617583|gb|EEX42765.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
          Length = 390

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 141/351 (40%), Positives = 194/351 (55%), Gaps = 21/351 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  +  + +  +I + L    T+++  +    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKADIPETEYIDALLEDLDTDIERYQLTDDPRLLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P  I  +L GI        ++EIT+EANP ++E   F GYR+ GV RI
Sbjct: 66  IFIGGGTPSLISPDGIGRLLRGIEARIAFKPDIEITMEANPGTIEAERFAGYRQVGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT+ Q   +L+
Sbjct: 126 SIGVQSFEPEKLTRLGRIHGRDEAVKAAQLAHQIGLNSFNLDLMHGLPDQTLEQALADLE 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+  A  HLS YQLTIE  TLFY         LP ++   D++ L     +A G   YE
Sbjct: 186 SAIELAPPHLSWYQLTIEPNTLFYFKPP----TLPDDDALWDIFELGHQKLTAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +  
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQN- 300

Query: 312 GHAVVEKEFLSSEQQ-AD-----EFLMMGLRLREGISVKDWEMLAGRNLDI 356
               + K +L SEQ  AD     EF M   RL E     D+    G  + +
Sbjct: 301 ----LAKPYLDSEQLVADVDRPFEFFMNRFRLIEPCPKADFSATTGLPISV 347


>gi|152980187|ref|YP_001353024.1| coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille]
 gi|151280264|gb|ABR88674.1| oxygen-independent coproporphyrinogen III oxidase
           [Janthinobacterium sp. Marseille]
          Length = 414

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 127/344 (36%), Positives = 205/344 (59%), Gaps = 6/344 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH+P+CVKKCPYCDFNSH       ++ ++ +   +++    L   R I +IF GG
Sbjct: 41  LSLYVHFPWCVKKCPYCDFNSHEATGGFPEDEYLSALRADLEMALPLIWGRKIYTIFIGG 100

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  I     +   VEIT+EANP + E   F+ YR +G+NR+S+G+Q
Sbjct: 101 GTPSLLSAAGLDRLLSDIRTLLPLDGAVEITMEANPGTFEAEKFKSYRASGINRLSIGIQ 160

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR HN  EA  A+ +A + F   + DL+YALP QT+ +  +++Q A++YA
Sbjct: 161 SFNSRHLDALGRIHNGDEAQRAVDIAASNFDNFNLDLMYALPSQTLDEARLDVQTAIAYA 220

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLY LT+E  T+F K       V+P ++ + D+ ++ +  T A G   YE+S ++ 
Sbjct: 221 PPHLSLYHLTMEPNTVFAKYPP----VVPDDDASADMQDMIEQETGAAGYQHYEVSAYAQ 276

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ++ HNLNYW++GDY+GIG GAH+++      +  +  K P+S+++ +R  G+ + E+
Sbjct: 277 PKRQARHNLNYWQFGDYLGIGAGAHTKLSFPHRVIRQARYKQPKSYMEQMRL-GNPIQEE 335

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           + ++  +   EF++  +RL EG+ V  +    G  L+   ER L
Sbjct: 336 KEITRSELGFEFMLNAMRLVEGVEVNMFAERTGMPLN-AVERAL 378


>gi|325127827|gb|EGC50735.1| hypothetical protein NMXN1568_1476 [Neisseria meningitidis N1568]
 gi|325131882|gb|EGC54582.1| hypothetical protein NMBM6190_1409 [Neisseria meningitidis M6190]
 gi|325137932|gb|EGC60507.1| hypothetical protein NMBES14902_1559 [Neisseria meningitidis
           ES14902]
 gi|325139886|gb|EGC62417.1| hypothetical protein NMBCU385_1468 [Neisseria meningitidis CU385]
 gi|325197885|gb|ADY93341.1| hypothetical protein NMBG2136_0612 [Neisseria meningitidis G2136]
 gi|325200649|gb|ADY96104.1| hypothetical protein NMBH4476_1524 [Neisseria meningitidis H44/76]
          Length = 399

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|325129805|gb|EGC52613.1| hypothetical protein NMBOX9930304_1399 [Neisseria meningitidis
           OX99.30304]
 gi|325202539|gb|ADY97993.1| hypothetical protein NMBM01240149_1428 [Neisseria meningitidis
           M01-240149]
 gi|325207711|gb|ADZ03163.1| hypothetical protein NMBNZ0533_0711 [Neisseria meningitidis
           NZ-05/33]
          Length = 399

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|255066001|ref|ZP_05317856.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria sicca ATCC 29256]
 gi|255049912|gb|EET45376.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria sicca ATCC 29256]
          Length = 391

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 130/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F  M   G L    +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHMPPKGLL---QDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++    A VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSAAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLATDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|194289071|ref|YP_002004978.1| coproporphyrinogen iii oxidase [Cupriavidus taiwanensis LMG 19424]
 gi|193222906|emb|CAQ68911.1| Oxygen-independent coproporphyrinogen III
           oxidase(Coproporphyrinogenase)(Coprogen oxidase)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 410

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 217/381 (56%), Gaps = 12/381 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           GS  L +YVH P+CV+KCPYCDFNSH       +++ ++ ++ +   +++    L   R 
Sbjct: 29  GSPPLSLYVHVPWCVRKCPYCDFNSHAAPGADNHEIPEDLYLDALRADLEQSLPLVWGRP 88

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  YR +G+
Sbjct: 89  VHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEANPGTFEAEKFASYRASGI 148

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+QS  ++ L+ LGR H  +EA  AI +A+  F  ++ DL+YALP QT+ + + +
Sbjct: 149 NRLSIGIQSFNDRHLQALGRIHGGTEARRAIDIAQASFDNINLDLMYALPGQTLQECQAD 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ AL Y   HLSLY LT+E  TLF K        LP ++ A ++ +  ++ T+A G   
Sbjct: 209 VETALGYGTTHLSLYHLTLEPNTLFAKFPP----ALPDDDTAYEMQDWIEARTAAAGYRH 264

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE S ++    E+ HNLNYWR+GDY+GIG GAH ++      +     KHP +++     
Sbjct: 265 YETSAYARPHREARHNLNYWRFGDYLGIGAGAHGKLSFPQRVLRQMRHKHPATYMAQAMA 324

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFI 368
            G+AV E   + +++   EF++  LRL +G+    ++   G  L    ++    +++G +
Sbjct: 325 -GNAVQEARDVGADELPFEFMLNALRLTDGVPASSFQDYTGLPLHTISKQLAEAEKKGLL 383

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
           E    + +R T+ G   L+ +
Sbjct: 384 E-ADLTTIRPTELGRRFLNDL 403


>gi|15676563|ref|NP_273707.1| coproporphyrinogen III oxidase [Neisseria meningitidis MC58]
 gi|7225891|gb|AAF41083.1| oxygen-independent coprophorphyrinogen III oxidase family protein
           [Neisseria meningitidis MC58]
 gi|316983631|gb|EFV62612.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Neisseria meningitidis H44/76]
          Length = 391

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|319410037|emb|CBY90371.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria meningitidis WUE 2594]
          Length = 391

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPTAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|161869602|ref|YP_001598769.1| coproporphyrinogen III oxidase [Neisseria meningitidis 053442]
 gi|161595155|gb|ABX72815.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis 053442]
          Length = 399

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKINIDLMYALPNQTVRTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|170693636|ref|ZP_02884794.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
 gi|170141418|gb|EDT09588.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
          Length = 409

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 197/327 (60%), Gaps = 6/327 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     EN ++ +   +++    L   R + ++F 
Sbjct: 32  PLSLYVHFPWCVRKCPYCDFNSHEWKGDTFPENDYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A + F   + DL++ALP+QT+ + + ++  ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSTQARRAVEVAASTFDNFNLDLMFALPQQTLAECQADIDTALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +  Q  TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIQERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 268 AKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPATFIEQA-KAGAAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E+  +       EF++  LRL EG  V
Sbjct: 327 EEHEVGPRDLPFEFMLNALRLVEGFPV 353


>gi|71909464|ref|YP_287051.1| coproporphyrinogen III oxidase [Dechloromonas aromatica RCB]
 gi|71849085|gb|AAZ48581.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Dechloromonas aromatica RCB]
          Length = 399

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 131/340 (38%), Positives = 195/340 (57%), Gaps = 5/340 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S  L +YVH P+CV+KCPYCDFNSH     + +  ++ + + ++Q    L   R + S+F
Sbjct: 25  SPPLALYVHVPWCVQKCPYCDFNSHEANGTIPEREYVDALIADLQSALPLIWGRPVVSVF 84

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  ++        ++ + EIT+EANP +VE   F G+R AGVNR+SL
Sbjct: 85  FGGGTPSLLSPAAVDELIATFRALAMLAPDAEITLEANPGTVEAEKFAGFRSAGVNRLSL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  ++ L+ LGR H A EA  A  LA   F   + DL+Y LP QT  Q   +++ AL
Sbjct: 145 GIQSFNDEHLQALGRIHGAEEAKRAAQLAGEHFDSFNLDLMYGLPGQTHEQALSDVETAL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S++  HLS YQLT+E  T F     +    LP  ++  D+    ++  +A G   YE S 
Sbjct: 205 SFSPSHLSCYQLTLEPNTRFAAFPPE----LPESDICADMQESIEARLAAAGFSNYETSA 260

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +  HNLNYW +GDY+GIG GAHS++ +    +     KHP+++L+ +R +GHAV
Sbjct: 261 FAQRGKQCKHNLNYWYFGDYLGIGAGAHSKLTLHDRVLRQMRWKHPKAYLENIR-SGHAV 319

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E   +       EF+M  LRL +G     +E    ++L+
Sbjct: 320 QEDNQVEVASLPFEFMMNALRLADGFHPSLFEARTAQSLN 359


>gi|295677346|ref|YP_003605870.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
 gi|295437189|gb|ADG16359.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
          Length = 409

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 216/378 (57%), Gaps = 11/378 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     + +++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGASFPESDYLDALRADLEMALPLIWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E + F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEADKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+A++A  A+ +A   F   + DL++ALPKQT+ + + +++ ALS
Sbjct: 152 IQSFNETQLKALGRIHDAAQARHAVEVAATTFDNFNLDLMFALPKQTLAECQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     T+A G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHQRTAAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  V  +  KHP ++++  R  G +V 
Sbjct: 268 ARPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRIVRQARYKHPTTFIEQARA-GASVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           E+  +       EF++  LRL EG  V  +    G ++    E  LQ   R+  I R   
Sbjct: 327 EEHEVGPRDLPFEFMLNALRLVEGFPVHRFIERTGLSI-TTIEPALQEAERRKLITR-DH 384

Query: 374 SRLRCTQRGMTMLDSVIA 391
            R+  T  G   L+ + A
Sbjct: 385 ERIAPTPLGQAFLNDLQA 402


>gi|8922911|ref|NP_060816.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Homo sapiens]
 gi|145566941|sp|Q9HA92|RSAD1_HUMAN RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|7023659|dbj|BAA92043.1| unnamed protein product [Homo sapiens]
          Length = 442

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 136/379 (35%), Positives = 220/379 (58%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + +++E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQAAHLPADLEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|148683983|gb|EDL15930.1| radical S-adenosyl methionine domain containing 1, isoform CRA_c
           [Mus musculus]
          Length = 397

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 126/330 (38%), Positives = 195/330 (59%), Gaps = 6/330 (1%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S+FFGGGTPSL 
Sbjct: 1   WPYCEKRCSYCNFNKYIPR-GVEEGTVRNCLVTEARTLLRLSGVQRVESVFFGGGTPSLA 59

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +A +L+ +A+   + ++ E+T+EANP+S        +  AGVNR+S+G+QSL++  
Sbjct: 60  SPHTVAAVLEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSIGLQSLDDAE 119

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ+ L +  DHLS
Sbjct: 120 LQLLGRTHSASDALRTLAEARLLFPGRVSVDLMLGLPAQKVEPWLQQLQKLLYHCDDHLS 179

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE+SN +  GA S
Sbjct: 180 LYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVSNFARNGALS 239

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEKE 319
            HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V   GH   +  
Sbjct: 240 THNWTYWQCGQYLGIGPGAHGRFVPQGTGGHTREARIQTLEPDNWMKEVTLFGHGTRKCV 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML 349
            L   +  +E L MGLR   G++ + W+  
Sbjct: 300 RLGKLELLEEVLAMGLRTDVGVTHQHWQQF 329


>gi|307730702|ref|YP_003907926.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
 gi|307585237|gb|ADN58635.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
          Length = 409

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 197/327 (60%), Gaps = 6/327 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   EN ++ +   +++    L   R + ++F 
Sbjct: 32  PLSLYVHFPWCVRKCPYCDFNSHEWKGETFPENDYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++ +A  A+ +A   F   + DL++ALP+QT+ + E +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSKQARQAVEVAATTFDNFNLDLMFALPQQTLAECEADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FEPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 268 AKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPATFIEQA-KAGAAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E+  +S+     EF++  LRL EG  V
Sbjct: 327 EEHEVSARDLPFEFMLNALRLMEGFPV 353


>gi|71274726|ref|ZP_00651014.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Dixon]
 gi|71899593|ref|ZP_00681748.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
 gi|170730032|ref|YP_001775465.1| coproporphyrinogen III oxidase [Xylella fastidiosa M12]
 gi|71164458|gb|EAO14172.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Dixon]
 gi|71730635|gb|EAO32711.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
 gi|167964825|gb|ACA11835.1| coproporphyrinogen III oxidase [Xylella fastidiosa M12]
          Length = 383

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 216/379 (56%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F G
Sbjct: 6   PLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVFLG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   A    ++ + EIT+E NP + E   F  Y  AG+NR+S G+
Sbjct: 66  GGTPSLFPPEAIDRFLQIAAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSFGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA +
Sbjct: 126 QSFNDAALRRLGRIHDSLQAEHAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRAFA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+FY     G   +P ++ A ++   TQ + +  G   YE+S +
Sbjct: 186 LAPTHLSYYQLTLEPNTVFYARPPQG---IPDDDAAWEMQEHTQRLLAEAGYQHYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L        A
Sbjct: 243 AREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDNA-GTVSA 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE---RV 371
           +   E + + +   E+++  LRLREG  ++D+ +  G  L +E      R+       R 
Sbjct: 302 IGGDEIVPTARLPFEYMLNLLRLREGFRLQDFALRTG--LTVESIHAALREAVARGWLRC 359

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +   +  T+ G+   + VI
Sbjct: 360 ELEHVIPTELGLRFANDVI 378


>gi|328474074|gb|EGF44879.1| HemN family oxidoreductase [Vibrio parahaemolyticus 10329]
          Length = 392

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/347 (39%), Positives = 195/347 (56%), Gaps = 17/347 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L    T++   R    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYISALLEDLDTDIDKYRLNDAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI        ++EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIERLLKGIEARIPFKPDIEITMEANPGTIEAERFVGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A  L   I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQEKLERLGRIHGQDEAVNAAKLTHQIGLNSFNLDLMHGLPDQSIKQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   YE
Sbjct: 186 KAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWL----KM 307
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L     M
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQNM 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V+   H    ++ ++ E +  EF M   RL E    +D+    G  L
Sbjct: 302 VKPYLHT---EQLVADEDRPFEFFMNRFRLMEACPKQDYVDTTGLPL 345


>gi|254429937|ref|ZP_05043644.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alcanivorax sp. DG881]
 gi|196196106|gb|EDX91065.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alcanivorax sp. DG881]
          Length = 383

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 214/377 (56%), Gaps = 20/377 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  R ++ +  ++Q+ LT+++    L G R + ++F GG
Sbjct: 8   LSLYIHTPWCVRKCPYCDFNSH-ERGEIPEAAYLQALLTDLEQDLPLIGDRPVETVFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+       +  GI +  T+ ++ EIT+EANP ++E   F+G+R AG+NR+S+GVQ
Sbjct: 67  GTPSLMSADFYRQLFQGIRQRLTLQADAEITLEANPGTLETGRFEGFRDAGINRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H+AS AI A H AR   F   + D+++ALP Q+  Q   +LQ+A++ 
Sbjct: 127 SFNNAHLQALGRIHDASAAIDAAHQARAAGFDNFNLDIMHALPGQSHAQALDDLQQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y+LTIE  T+FY+       V P  +   D      ++ + HG   YEIS  +
Sbjct: 187 QPTHLSWYELTIEPNTVFYRAPP----VQPDSDAMADTEQAGFALLAQHGYQRYEISAFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHAV 315
             G    HNLNYW++GDY+GIG GAH ++   S  H       + PE +L       HA 
Sbjct: 243 QSGRRCRHNLNYWQFGDYLGIGAGAHGKITQASQGHVHRYQKTRKPEDYLA---DAAHAR 299

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQRQGFIER 370
            + + ++ E +  E L+ GLRL +GI+   W+ LA    +   +       L++QG +  
Sbjct: 300 RQHQPIAREDRLFEALLNGLRLVDGIT---WQTLAQATGEPVSQWQNALTPLEQQGLLA- 355

Query: 371 VQFSRLRCTQRGMTMLD 387
           +   RL CT  G+  L+
Sbjct: 356 ITDQRLACTDNGLRHLN 372


>gi|325143947|gb|EGC66257.1| hypothetical protein NMBM01240013_1555 [Neisseria meningitidis
           M01-240013]
 gi|325206490|gb|ADZ01943.1| hypothetical protein NMBM04240196_1502 [Neisseria meningitidis
           M04-240196]
          Length = 399

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + ++FFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETVFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKINIDLMYALPNQTVRTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +   S     G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHSALENGGFIHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|297700808|ref|XP_002827424.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Pongo abelii]
          Length = 442

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 219/379 (57%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R +V +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RVEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN +  
Sbjct: 221 DHVSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRALLREAGFHQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|240112338|ref|ZP_04726828.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|240117362|ref|ZP_04731424.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|240122917|ref|ZP_04735873.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
 gi|254493139|ref|ZP_05106310.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 1291]
 gi|268598397|ref|ZP_06132564.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|268603058|ref|ZP_06137225.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|268681537|ref|ZP_06148399.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
 gi|226512179|gb|EEH61524.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 1291]
 gi|268582528|gb|EEZ47204.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|268587189|gb|EEZ51865.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|268621821|gb|EEZ54221.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
          Length = 391

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 204/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         GL  YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGLIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|55646747|ref|XP_511926.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial isoform 2 [Pan troglodytes]
          Length = 442

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 219/379 (57%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R +V +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RVEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRMHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGLWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|294671109|ref|ZP_06735964.1| hypothetical protein NEIELOOT_02817 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307217|gb|EFE48460.1| hypothetical protein NEIELOOT_02817 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 391

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAITT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSVAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGIPAAKIMAQIETARQKGLLETNPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEQGRLFLNDLL 387


>gi|77461548|ref|YP_351055.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf0-1]
 gi|77385551|gb|ABA77064.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 401

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 216/373 (57%), Gaps = 12/373 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R +SSIFFGGGTP
Sbjct: 32  YIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDAMLADLDQDLHAVYGRELSSIFFGGGTP 91

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SL   + +  +L+G+ +    + ++EIT+EANP + E   F  YRK G+NR+S+G+QS +
Sbjct: 92  SLFSAEALGRLLEGVKQRIPFADDIEITLEANPGTFEQEKFVAYRKLGINRLSIGIQSFQ 151

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A+     
Sbjct: 152 QEKLKALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLDDALSDLRQAIELKPT 211

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S YQLT+E  T+F+        VLP ++   D+    Q++ + HG   YE+S ++  G
Sbjct: 212 HISWYQLTLEPNTVFWNQPP----VLPEDDTLWDIQEAGQALLAEHGYAQYEVSAYAQPG 267

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKE 319
             + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +       EK 
Sbjct: 268 RPARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYLNPAKS--FQAGEKA 325

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLR 377
            L++++   EFLM  LRL  G+  + +    G +LD   E  R  ++ G ++ V+ SRL 
Sbjct: 326 -LTNDEMPFEFLMNALRLTAGVESRLYPERTGLSLDTLAEGRREAEQSGLLQ-VEPSRLA 383

Query: 378 CTQRGMTMLDSVI 390
            T+RG   L+ ++
Sbjct: 384 TTERGQLFLNDLL 396


>gi|325265917|ref|ZP_08132603.1| putative coproporphyrinogen dehydrogenase [Kingella denitrificans
           ATCC 33394]
 gi|324982555|gb|EGC18181.1| putative coproporphyrinogen dehydrogenase [Kingella denitrificans
           ATCC 33394]
          Length = 405

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 143/377 (37%), Positives = 215/377 (57%), Gaps = 11/377 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+C++KCPYCDFNSH  +  + ++ ++Q+ LT++Q        R I +IF GG
Sbjct: 12  LSLYVHIPWCLQKCPYCDFNSHTIKTTLDEDAYVQALLTDLQHELPHFWGRGIETIFIGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+     I  +L GI     ++   EIT+EANP + + + FQG+R AG+NR+S+GVQ
Sbjct: 72  GTPSVFSVSAIDRLLSGIRALVKLNPEAEITLEANPGTFDHDKFQGFRSAGINRLSIGVQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L  LGR H+A EA  AI  A  IF R++ DL+YALP+Q       ++Q ALS+ 
Sbjct: 132 SFDDRKLAALGRIHSADEARTAIEKACRIFERVNIDLMYALPQQNAADALADVQAALSFG 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S YQLT+E  T F      G   LP ++ A D+ +   S     G   YE S  + 
Sbjct: 192 VQHISAYQLTLEPNTPFGHTPPKG---LPEDDTAQDIEDTVHSALQHAGFERYETSAFAR 248

Query: 259 LG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSH--RVAISIEK-HPESWLKMVRKNGHA 314
              + + HNLNYW++GDYIGIG GAH ++   SH  R+  ++ K HPE++L  ++ N  A
Sbjct: 249 TPESRARHNLNYWQFGDYIGIGAGAHGKI---SHHDRIERTVRKRHPEAYLAAMQGNVQA 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQF 373
            ++ + ++      EF+M  LRL  G+    +    G +L  IE      RQ  +     
Sbjct: 306 AIDHKTVAPNDLPFEFMMNALRLTGGVPAALFAERTGISLAQIEPVLAKARQKGLLDHAP 365

Query: 374 SRLRCTQRGMTMLDSVI 390
           + LR T+ G   L+ ++
Sbjct: 366 NVLRPTELGRRFLNDLL 382


>gi|110835441|ref|YP_694300.1| coproporphyrinogen oxidase [Alcanivorax borkumensis SK2]
 gi|110648552|emb|CAL18028.1| coproporphyrinogen oxidase [Alcanivorax borkumensis SK2]
          Length = 394

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 144/386 (37%), Positives = 216/386 (55%), Gaps = 20/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  R ++ +  ++Q+ LT+++    L G R++ ++F G
Sbjct: 18  PLSLYIHTPWCVRKCPYCDFNSH-ERGEIPEAAYLQALLTDLEQDLPLIGERTVETVFIG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +  GI +   +  NVEIT+EANP ++E   FQG+R+AG+NR+S+G 
Sbjct: 77  GGTPSLLSADFYQQLFHGIRQRLALHPNVEITLEANPGTLENGRFQGFREAGINRLSIGA 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR HNAS AI A H AR   F   + D+++ALP QT  Q   +LQ+A++
Sbjct: 137 QSFNNAHLQALGRIHNASAAINAAHQAREAGFDNFNLDIMHALPGQTHAQALDDLQQAIA 196

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS Y+LTIE  T+FY+       V P  +   D      ++ + HG   YEIS  
Sbjct: 197 LQPTHLSWYELTIEPNTVFYRSPP----VQPDSDTMADTEQAGFALLAEHGYLRYEISAF 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS----HRVAISIEKHPESWLKMVRKNG 312
           +  G    HNLNYW++GDY+GIG GAH ++   +    HR   +  + PE +L       
Sbjct: 253 AQPGRPCRHNLNYWQFGDYLGIGAGAHGKITAAAQGDVHRYQKT--RKPEDYLA---DAA 307

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIE 369
           HA  + + ++ E +  E L+ GLRL  G+  +  E   G  +  +    L   ++QG + 
Sbjct: 308 HARRQHQPIAREDRLFEALLNGLRLTHGLCWQTLEDATGEPV-AQWRHQLTPFEQQGLLT 366

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                RL CT  G+  L+ ++  LA 
Sbjct: 367 LTD-QRLACTDNGLRHLNGLLEKLAA 391


>gi|323498666|ref|ZP_08103657.1| HemN family oxidoreductase [Vibrio sinaloensis DSM 21326]
 gi|323316266|gb|EGA69286.1| HemN family oxidoreductase [Vibrio sinaloensis DSM 21326]
          Length = 391

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/350 (40%), Positives = 199/350 (56%), Gaps = 21/350 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQL-TGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  +  + ++ +I + L +++      QL + PR + S
Sbjct: 8   ALSLYVHIPWCVQKCPYCDFNSHALKADIPEKEYIAALLQDLEADIKRYQLESNPRLLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  Q IA +L GI         +EIT+EANP ++E   F GY+KAGV RI
Sbjct: 68  IFIGGGTPSLISAQGIADLLSGIEARLPFKPGIEITMEANPGTIEAERFAGYQKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP QT+ Q   +L+
Sbjct: 128 SVGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPNQTVDQALNDLE 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T+FY         LP ++   D++ L     +  G   YE
Sbjct: 188 KAIALDPPHLSWYQLTIEPNTMFYYKQP----TLPDDDDLWDIFELGHKKLADAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L      
Sbjct: 244 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKISFADGRIVRTTKIKHPKGYLA----- 298

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLD 355
            +  + K +L+SE+Q        EF M   RL E    +D+    G   D
Sbjct: 299 AYDNMVKPYLNSEEQVAEQDRPFEFFMNRFRLIEACPKQDFLDTTGLGFD 348


>gi|30046991|gb|AAH50538.1| Radical S-adenosyl methionine domain containing 1 [Homo sapiens]
 gi|119615016|gb|EAW94610.1| radical S-adenosyl methionine domain containing 1 [Homo sapiens]
          Length = 442

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/379 (35%), Positives = 219/379 (57%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|59800687|ref|YP_207399.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA 1090]
 gi|293399618|ref|ZP_06643771.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
 gi|59717582|gb|AAW88987.1| putative porphyrin oxidoreductase [Neisseria gonorrhoeae FA 1090]
 gi|291610187|gb|EFF39309.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
          Length = 391

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|262273746|ref|ZP_06051559.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
 gi|262222161|gb|EEY73473.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
          Length = 384

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/384 (38%), Positives = 217/384 (56%), Gaps = 17/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH  +  V + ++I + L +++        ++G R +SS
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHTLKGDVPERDYIDALLDDLRKDLNRFHGVSG-RELSS 64

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+ P+ IA +L GI      + ++EIT+EANP +VE + F  YRKAGVNRI
Sbjct: 65  IFIGGGTPSLVSPEEIARLLQGIEAQIPFADDIEITMEANPGTVEADKFVAYRKAGVNRI 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS + Q L  LGR H A EAI A  LA        + DL++ LP QT+     +L+
Sbjct: 125 SIGVQSFDNQKLARLGRIHGADEAIRAARLAHEADLNSFNLDLMHGLPDQTLEGALDDLR 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T +Y         LP ++   D++    ++ +  G   YE
Sbjct: 185 QAIALNPPHLSWYQLTIEPNTQYYSKPP----TLPDDDDLWDIFEQGHALLTEAGYVQYE 240

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
            S +S  G +  HNLNYWR+GDY+GIG GAH +V +  + V  +++ KHP  +L     +
Sbjct: 241 TSGYSKPGFQCRHNLNYWRFGDYLGIGCGAHGKVTLEDNTVKRTVKVKHPRGYLD---PD 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECE-RNLQRQGFIE 369
              + E   + + +   EF M   RL E     D+    G +LD +E   R+   +G + 
Sbjct: 298 NAYLSEIITVEASELPFEFFMNRFRLVEPCPKADYPARTGLSLDTVEAPLRHAIIEGLLT 357

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
             Q +  + T++G   L+ ++AN 
Sbjct: 358 ETQ-THWQVTEKGRLFLNDLLANF 380


>gi|325203752|gb|ADY99205.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Neisseria meningitidis M01-240355]
          Length = 391

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALENAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMRCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETNPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|325133820|gb|EGC56476.1| hypothetical protein NMBM13399_1544 [Neisseria meningitidis M13399]
          Length = 399

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|121634461|ref|YP_974706.1| coproporphyrinogen III oxidase [Neisseria meningitidis FAM18]
 gi|120866167|emb|CAM09907.1| putative porphyrin oxidoreductase [Neisseria meningitidis FAM18]
 gi|325135743|gb|EGC58355.1| hypothetical protein NMBM0579_1451 [Neisseria meningitidis M0579]
          Length = 399

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 25  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 85  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS     L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 145 QSFNNDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 205 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFA 261

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 262 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 322 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVF 381

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 382 RPTEKGRLFLNDLL 395


>gi|325141883|gb|EGC64325.1| hypothetical protein NMB9615945_1490 [Neisseria meningitidis
           961-5945]
          Length = 399

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 203/371 (54%), Gaps = 4/371 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFGGGT
Sbjct: 28  LYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGT 87

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GVQS 
Sbjct: 88  PSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSF 147

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++    
Sbjct: 148 NDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGAT 207

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT+E  T F      G   LP +  A+D+ +       + G   YE S  +   
Sbjct: 208 HISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALESAGFVHYETSAFAKPA 264

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE++ 
Sbjct: 265 MQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKT 324

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRLRCT 379
           +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  R T
Sbjct: 325 VAAEDLPFEFMMNALRLTDGVPTAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPT 384

Query: 380 QRGMTMLDSVI 390
           ++G   L+ ++
Sbjct: 385 EKGRLFLNDLL 395


>gi|293394479|ref|ZP_06638775.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291422944|gb|EFE96177.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 383

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/377 (36%), Positives = 216/377 (57%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     +T  RSI +IF GG
Sbjct: 11  LSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDADLPMTSGRSIGTIFIGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F GY++AGVNRIS+GVQ
Sbjct: 71  GTPSLLSAEAMQSLLDGVRARIRVNDDAEITMEANPGTVEADRFSGYQRAGVNRISIGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 131 SFSAEKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIAL 190

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++    ++ SA G   YE S ++
Sbjct: 191 NPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFQQGHALLSAAGYQQYETSAYA 246

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +++     G  + 
Sbjct: 247 KPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRIVRTAKTKHPRGFMQ-----GKYLD 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQF 373
           ++  +++E +  EF M   RL E     ++    G +   +  + +  L +   +E  Q 
Sbjct: 302 KQHEVATEDRPFEFFMNRFRLLEAAPRAEFSAYTGLDESTIRPQLDAALAKGYLVETAQH 361

Query: 374 SRLRCTQRGMTMLDSVI 390
            ++  T+RG   L+S++
Sbjct: 362 WQI--TERGKLFLNSLL 376


>gi|253997757|ref|YP_003049820.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           SIP3-4]
 gi|253984436|gb|ACT49293.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           SIP3-4]
          Length = 405

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 203/374 (54%), Gaps = 16/374 (4%)

Query: 8   ENNMTGQGSNS-------LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           EN + GQ ++S       L +Y+H P+CV+KCPYCDFNSH  R  + +  ++ + + +++
Sbjct: 14  ENPLVGQLTSSGLRNPPPLSLYIHIPWCVRKCPYCDFNSHESRNPIPESAYVDALIADLE 73

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L   R + SIFFGGGTPSL   ++I  IL  +     +    EIT+EANP + E  
Sbjct: 74  QATPLVWGRKVRSIFFGGGTPSLFSAESIDRILSHVRMLTPLEYEAEITLEANPGTFEAE 133

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F GYR AGVNRIS+G+QS   + L+ LGR HN+ EA  A   A  IF  ++ DL+YALP
Sbjct: 134 RFAGYRDAGVNRISIGIQSFNPRHLQALGRIHNSEEAQYAAEHAIKIFGNVNLDLMYALP 193

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT+ +   ++  A++    H+S Y LT+E  T FY         LP ++ +  +    +
Sbjct: 194 EQTLEEALQDMHTAIALGPTHISAYHLTLEPNTPFYYKPP----ALPDDDTSATMQEAIE 249

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + + HG   YE S     G    HNLNYW +GDY+GIG GAHS++      +  S  K 
Sbjct: 250 HLLADHGYGHYETSAFGKAGKRCRHNLNYWVFGDYLGIGAGAHSKLSFHDRILRQSRIKQ 309

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIE 357
           P +++K V +  H V E+  L       EF+M  LRL EG   K +  + G+ L   D  
Sbjct: 310 PNAYMKAVAEMSH-VEEERLLDRADLGFEFMMNALRLTEGFDPKLFTTMTGQALSTVDPA 368

Query: 358 CERNLQRQGFIERV 371
            ++  QR G I R 
Sbjct: 369 LQQAEQR-GLITRT 381


>gi|194367045|ref|YP_002029655.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia
           R551-3]
 gi|194349849|gb|ACF52972.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           maltophilia R551-3]
          Length = 408

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 218/380 (57%), Gaps = 12/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  + ++  + +I + L ++     L   R + S+FFG
Sbjct: 30  PLSLYVHLPWCVRKCPYCDFNSHQAKGELPFDAYIDALLRDLDQDLPLVWGRVVHSVFFG 89

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   +     + N EIT+E NP + E   F  YR AGVNR+S G+
Sbjct: 90  GGTPSLFPPEAIDRFLQQASARLRFAPNAEITLETNPGTAEHGRFDRYRAAGVNRLSFGI 149

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR H++ EA  A+ +A++  +   + DL+YALP+QT+   E +L+RA +
Sbjct: 150 QSFDDAMLKRLGRIHDSGEAERAVKMAQDAGYDNFNIDLMYALPEQTLAGAEADLERAFA 209

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T+F+     G   +P E+ A D+    Q++ +  G   YE+S +
Sbjct: 210 LQPAHISHYQLTLEPNTVFFARPPQG---IPDEDNAWDMQEHCQALLAQAGFGQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +S HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+++L        +
Sbjct: 267 ARPGRQSAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKLKHPQAYLDSAGTPA-S 325

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERV 371
               E ++ E+   E+++  LRL EG  ++D+E   G     LD      +QR G+++ V
Sbjct: 326 FGGDEVIAPERLPFEYMLNLLRLHEGFGLRDFESRTGLPRSVLDAPLAEAVQR-GWLD-V 383

Query: 372 QFSRLRCTQRGMTMLDSVIA 391
               ++ T+ G    + V++
Sbjct: 384 TDGHVQPTELGRRFTNDVVS 403


>gi|109491680|ref|XP_001081294.1| PREDICTED: radical S-adenosyl methionine domain containing 1-like
           [Rattus norvegicus]
 gi|149053892|gb|EDM05709.1| rCG34912 [Rattus norvegicus]
          Length = 442

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 199/331 (60%), Gaps = 6/331 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-GVDEGAVRNCLVTEARTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A IL+ +A+   + ++ E+T+EANP+S        +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAILEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  L+ LGR H+A EA+  +  AR++FP R+S DL+  LP Q +  W  +LQ+ L +  
Sbjct: 161 DDAELQLLGRTHSAREALQTLTEARHLFPGRVSVDLMLGLPAQKVKPWLQQLQKLLRHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE+SN +  
Sbjct: 221 DHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+GIGPGAH +      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSNHNWTYWQCGQYLGIGPGAHGQFVPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            +   LS  +  +E L MGLR   G++ + W
Sbjct: 341 RKCVPLSELELLEEVLAMGLRTDVGVTHQHW 371


>gi|332284448|ref|YP_004416359.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
 gi|330428401|gb|AEC19735.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
          Length = 416

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 218/386 (56%), Gaps = 24/386 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH    ++ +++++ +   +++    L   R + SIF GG
Sbjct: 42  LSLYVHVPWCVRKCPYCDFNSHELGAELPEQDYLTALQADLEQALPLIWGRQVVSIFIGG 101

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q +  +L        +  + EIT+EANP +VE   F  Y  +GVNRISLG+Q
Sbjct: 102 GTPSLLSGQALDQMLAMFRACLNLLPDAEITLEANPGTVEAGRFADYAASGVNRISLGIQ 161

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S + ++L  LGR H+A +A AA+ +A+ +  R++ D++YALP Q++     +L +A+S+ 
Sbjct: 162 SFDNRALEALGRIHDAEQARAAVEIAQKVVDRVNLDIMYALPGQSIDDCAQDLHQAMSFQ 221

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLY LT+E  T+F K        +P ++ +  + +L    T+A G   YE+S ++ 
Sbjct: 222 TGHLSLYHLTLEPNTVFAKYPP----TVPDDDTSAAMQDLIADATAAGGWERYEVSAYAR 277

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKNGHAVV 316
            G    HNLNYW +GDY+GIGPGAH ++      V  +  K+P SW+K  M+R   H   
Sbjct: 278 SGQRCRHNLNYWEFGDYLGIGPGAHGKLSFHDKIVRQAKLKNPSSWMKKAMLRDGSH--- 334

Query: 317 EKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGF 367
               L+ ++Q D      EF++  LRL+ G+    +    G++   +    ER + R G 
Sbjct: 335 ----LAEDRQVDWKDLGFEFMLNVLRLKHGVPRSSYIERTGQSILAIAPALERAVAR-GL 389

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           +E     RL+ T+ G   L+ + A  
Sbjct: 390 LEPGH-ERLQATEHGWQFLNDLQAEF 414


>gi|309378944|emb|CBX22397.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 391

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + ++FFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETVFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALENAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCCHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSVAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTKQGRLFLNDLL 387


>gi|260441106|ref|ZP_05794922.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|291044438|ref|ZP_06570147.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|291011332|gb|EFE03328.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
          Length = 391

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|298368352|ref|ZP_06979670.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282355|gb|EFI23842.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 391

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDGMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F          LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPK---CLPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  + +   +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLKTNPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|190575705|ref|YP_001973550.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia K279a]
 gi|190013627|emb|CAQ47262.1| putative coproporphyrinogen III oxidase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 408

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 222/393 (56%), Gaps = 12/393 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA  +N        L +YVH P+CV+KCPYCDFNSH  + ++  + +I + L ++     
Sbjct: 17  SADHDNPPRLVPPPLSLYVHLPWCVRKCPYCDFNSHQAKGELPFDAYIDALLRDLDQDLP 76

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R + S+FFGGGTPSL  P+ I   L   +     + N EIT+E NP + E   F  
Sbjct: 77  LVWGRVVHSVFFGGGTPSLFPPEAIDRFLQQASARLRFAPNAEITLETNPGTAEHGRFDR 136

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           YR AGVNR+S G+QS ++  L+ LGR H++ EA  A+ +A++  +   + DL+YALP+QT
Sbjct: 137 YRAAGVNRLSFGIQSFDDAMLKRLGRIHDSGEAERAVKMAQDAGYDNFNIDLMYALPEQT 196

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +   E +L+RA +    H+S YQLT+E  T+F+     G   +P E+ A D+    Q++ 
Sbjct: 197 LAGAEADLERAFALQPAHISHYQLTLEPNTVFFARPPQG---IPDEDNAWDMQEHCQALL 253

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHP 301
           +  G   YE+S ++  G +S HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP
Sbjct: 254 AQAGFGQYEVSAYARPGRQSAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKLKHP 313

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIEC 358
           +++L        +    + ++ E+   E+++  LRL EG  ++D+E   G     LD   
Sbjct: 314 QAYLDSAGTPA-SFGGNDVIAPERLPFEYMLNLLRLHEGFGLRDFESRTGLPRSVLDAPL 372

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
              +QR G+++ V    ++ T+ G    + V++
Sbjct: 373 AEAVQR-GWLD-VTDGHVQPTELGRRFTNDVVS 403


>gi|308050659|ref|YP_003914225.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
 gi|307632849|gb|ADN77151.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
          Length = 379

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/381 (37%), Positives = 219/381 (57%), Gaps = 14/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C +KCPYCDFNSH R+  + ++ +I + L ++     L   R ++SIF G
Sbjct: 5   PLSLYIHIPWCEQKCPYCDFNSHARKGAIPEQEYIAALLADLDRDLALAQGRMLTSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSLI P  IA +L G+A+    +   E+T+EANP ++E + F+ YR+AGVNR+S+GV
Sbjct: 65  GGTPSLISPAGIASLLSGVAERLPFAPQCEVTMEANPGTLEADRFRPYREAGVNRLSVGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H A EA  A + AR   F R + DL++ LP Q++T    +L++A++
Sbjct: 125 QSFQQDKLLILGRIHGAEEARRAANEARKAGFERFNLDLMHTLPGQSVTDALYDLEQAIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F     +    LP ++    ++   +++  A G   YEIS  
Sbjct: 185 LKPPHLSWYQLTIEPNTQFASKPPE----LPDDDTQWAIFEQGKAMLEAAGYRQYEISAW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ KHP+ +L+  R     +
Sbjct: 241 AQPGYQCEHNLNYWRFGDYLGIGCGAHGKITQPDGTLLRTVKVKHPKGYLEPGRD---PM 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE---MLAGRNLDIECERNLQRQGFIERVQ 372
            E+  +  E QA E+ M  LRL E + + +      L   ++       LQR G IER  
Sbjct: 298 AEQYSVEREDQALEYYMNRLRLMEPMPLSELSERTQLTPDDVAKPLNWALQR-GLIERDN 356

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             +++ T++G   L+ ++A  
Sbjct: 357 -QQMQLTEQGHRFLNELLAQF 376


>gi|313668861|ref|YP_004049145.1| porphyrin oxidoreductase [Neisseria lactamica ST-640]
 gi|313006323|emb|CBN87786.1| putative porphyrin oxidoreductase [Neisseria lactamica 020-06]
          Length = 391

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 129/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVRTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALENAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 QNNKQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETNPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|240127626|ref|ZP_04740287.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268686006|ref|ZP_06152868.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626290|gb|EEZ58690.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
          Length = 391

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 203/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|221065459|ref|ZP_03541564.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
 gi|220710482|gb|EED65850.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
          Length = 409

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 220/377 (58%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+KKCPYCDFNSH   +   + ++ +I + + +++    L   R++ S+F
Sbjct: 35  PLSLYVHLPWCLKKCPYCDFNSHAWAKGDALPEDRYIDALMADLESALPLIWGRTVHSVF 94

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++I  ++ G+     +  + EIT+EANP + E + F+ +R AGVNR+S+
Sbjct: 95  MGGGTPSLFSPESIDKLIAGLRARLRMEPDCEITMEANPGTFEKDRFKAFRAAGVNRLSI 154

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ L+ +GR H+A++A AA+  A + F   + DL+YALP Q++   + ++  AL
Sbjct: 155 GVQSFDDRYLQAVGRVHDAAQAQAAVREAADNFETFNIDLMYALPGQSLADLQRDVDTAL 214

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLS+Y LTIE  T F K       ++P ++ A ++ +L  + T   G+  YE+S 
Sbjct: 215 AFAPPHLSIYHLTIEPNTYFAKYPP----LVPEDDTAYEMLDLITASTQGAGMQRYEVSA 270

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           ++  G +  HN NYW++GDY+GIG GAHS++   +HR+   +  + P  ++ M    G  
Sbjct: 271 YAKEGHQCFHNSNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRFRDPARYMDMALA-GTP 328

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
           + +   +   +   E+++  LRLR G +++++    G  +    +     Q +G I R  
Sbjct: 329 LAQDNEVKRAELPFEYMLNALRLRGGFALQEFMERTGLPMSAIAKGLDQAQAKGLITR-D 387

Query: 373 FSRLRCTQRGMTMLDSV 389
             R+  T+RG   L  +
Sbjct: 388 LGRVVPTERGFDFLSDL 404


>gi|62896503|dbj|BAD96192.1| radical S-adenosyl methionine domain containing 1 variant [Homo
           sapiens]
          Length = 442

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/379 (35%), Positives = 220/379 (58%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + +++E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQAAHLPADLEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +L+  L +  
Sbjct: 161 DDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLRELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|304388086|ref|ZP_07370215.1| possible coproporphyrinogen dehydrogenase [Neisseria meningitidis
           ATCC 13091]
 gi|304337943|gb|EFM04083.1| possible coproporphyrinogen dehydrogenase [Neisseria meningitidis
           ATCC 13091]
          Length = 391

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + ++FFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETVFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALENAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMRCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETNPAVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|261364291|ref|ZP_05977174.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
 gi|288567538|gb|EFC89098.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
          Length = 391

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI+ A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLMRLGRVHNGKEALTAINTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPIEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++     EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAADLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T+RG   L+ ++
Sbjct: 374 RPTERGRLFLNDLL 387


>gi|73966371|ref|XP_851668.1| PREDICTED: similar to radical S-adenosyl methionine domain
           containing 1 [Canis familiaris]
          Length = 484

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 194/335 (57%), Gaps = 6/335 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S G    WP+C K+C YC+FN ++ R  V +       +TE Q + +L+G R + S+FFG
Sbjct: 81  SPGPCPPWPYCEKRCSYCNFNKYIPR-GVEEAAVRSCLVTEAQTLLRLSGVRRVESVFFG 139

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P  +A +L+ + +   + ++ E+T+EANP+S   +    +  AGVNR+S+G+
Sbjct: 140 GGTPSLASPSTVAAVLEAVDQAAHLPADSEVTLEANPTSAPSSRLAAFGAAGVNRLSIGL 199

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL++  L+ LGR H++ +A+  +  AR +FP R+S DL+  LP Q +  W  +L+  L 
Sbjct: 200 QSLDDTELQLLGRTHSSRDALQTLAEARRLFPGRVSVDLMLGLPAQQVGPWLRQLRTLLG 259

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+SLYQLT+E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN 
Sbjct: 260 CCDDHISLYQLTLERGTELFTQVQRGTLSAPDPELAAEMYQEGRALLRDAGFRQYEVSNF 319

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK---VGSHRVAISIEK-HPESWLKMVRKNG 312
           +  GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V   G
Sbjct: 320 ARNGALSTHNWTYWQCGQYLGVGPGAHGRFAPQGAGDHTREARIQTLEPDNWMKEVMLFG 379

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           H    +  LS  +  +E L MGLR   GI+ + W+
Sbjct: 380 HGTRRRIPLSKLELLEEVLAMGLRTDVGITHQHWQ 414


>gi|307547057|ref|YP_003899536.1| coproporphyrinogen III oxidase [Halomonas elongata DSM 2581]
 gi|307219081|emb|CBV44351.1| coproporphyrinogen III oxidase [Halomonas elongata DSM 2581]
          Length = 391

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/382 (36%), Positives = 220/382 (57%), Gaps = 14/382 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           L +YVH P+CV+KCPYCDFNSH   R  ++ +E ++ + + ++     L   R I S+F 
Sbjct: 8   LALYVHVPWCVRKCPYCDFNSHGVGRGAELPEEEYLAALIEDLDADLPLAAGREIVSVFI 67

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+       +L+ +     ++S++EIT+EANP ++E   F GYR+AG+NR+SLG
Sbjct: 68  GGGTPSLMSASFYLRLLEALQARLPLASDIEITLEANPGTLERGRFAGYREAGINRLSLG 127

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS ++  L  LGR H+  +A AAI  AR+  F  ++ DL++ LP Q++     +L RAL
Sbjct: 128 VQSFQDDQLAALGRIHSGGDAGAAIAEARHAGFDNLNIDLMHGLPGQSVELALADLDRAL 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + + +HLS YQLT+E  T F+         LP E V  D+ ++      A GL  YEIS 
Sbjct: 188 ALSPEHLSWYQLTLEPNTEFHSRPP----TLPEEEVLWDIQDMGHERLEAEGLERYEISA 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-----KHPESWLKMVRK 310
           ++  G  + HNLNYWR+GDY+GIG GAH ++   +    ++IE     + PE++L+    
Sbjct: 244 YARPGLGARHNLNYWRFGDYLGIGAGAHGKLSARAGD-GLTIERRWKARQPEAYLRRRHD 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-NLQRQGFIE 369
               V  +  +++++   EF M  LRL +G+S+  W   +G   ++   R    R+  + 
Sbjct: 303 PRGFVAGRAAVTADELPLEFAMNALRLVDGVSMATWSAHSGYPQEVMTSRLTRAREKGLL 362

Query: 370 RVQFSRLRCTQRGMTMLDSVIA 391
                RL+ + RG+  L+ ++A
Sbjct: 363 VEDPERLQASPRGLLFLNELLA 384


>gi|296202473|ref|XP_002748473.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial [Callithrix jacchus]
          Length = 442

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 218/379 (57%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+HWP+C K+C YC+FN ++ R  + +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYIHWPYCEKRCSYCNFNKYIPR-GMEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + ++ E+T+EANP+S  V+    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPVSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRTHSARDALRTLAEARWLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +A ++Y   ++     G   YE+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFAQVQQGALPAPDPELAAEMYERGRAALREAGFRQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V + GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMRFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + WE            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWEQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|113866971|ref|YP_725460.1| coproporphyrinogen III oxidase [Ralstonia eutropha H16]
 gi|113525747|emb|CAJ92092.1| Coproporphyrinogen III oxidase, Fe-S oxidoreductase [Ralstonia
           eutropha H16]
          Length = 410

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 219/382 (57%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           GS  L +YVH P+CV+KCPYCDFNSH       +++ ++ ++ +   +++    L   R 
Sbjct: 29  GSPPLSLYVHIPWCVRKCPYCDFNSHAAPGADNHEIPEDIYLDALRADLEQSLPLVWGRP 88

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+    +  +L  I     + ++ EIT+EA P + E + F  YR +G+
Sbjct: 89  VHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEAKPGTFEADKFASYRASGI 148

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+QS  ++ L+ LGR H  +EA  AI +A+  F  ++ DL+YALP QT+ +   +
Sbjct: 149 NRLSIGIQSFNDRHLQALGRIHGGAEARKAIDIAQASFDNINLDLMYALPGQTLDECRQD 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ ALSY   HLSLY LT+E  TLF K        LP ++ A ++ +  ++ T+  G   
Sbjct: 209 VEAALSYGTTHLSLYHLTLEPNTLFAKFPP----ALPDDDSAYEMQDWIEARTAQAGYRH 264

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YE S ++    E+ HNLNYWR+GDY+GIG GAH ++    HR+   +  KHP ++++   
Sbjct: 265 YETSAYAKPHREARHNLNYWRFGDYLGIGAGAHGKLSF-PHRILRQMRHKHPATYMERAL 323

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGF 367
             G+AV E   + +++   EF++  LRL +G+    +    G  L    ++    +++G 
Sbjct: 324 A-GNAVQEARDVGADELPFEFMLNALRLTDGVPASSFHDYTGLPLHTISKQLAEAEKKGL 382

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           +E    + +R T+ G   L+ +
Sbjct: 383 LE-ADLTTIRATELGRRFLNDL 403


>gi|254281851|ref|ZP_04956819.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR51-B]
 gi|219678054|gb|EED34403.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR51-B]
          Length = 383

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/378 (36%), Positives = 208/378 (55%), Gaps = 10/378 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+C +KCPYCDFNSH       +  ++ + L +++   Q    R I+SIF GG
Sbjct: 10  LALYVHIPWCERKCPYCDFNSHEGFKPDLEPVYVAALLADIEAQEQWIDSRPIASIFIGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL     I  +LDG+A+   + +  EIT+E NP S E + + GYR AGVNR+S+GVQ
Sbjct: 70  GTPSLFSADAIGKLLDGVARVAHLPAGTEITLETNPGSAEASRYIGYRAAGVNRLSIGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L  LGR H AS A  A  LAR+  F R + DL++ LP Q++     +L +AL+ 
Sbjct: 130 SFDDKQLTRLGRIHTASNARLATELARSAGFDRFNIDLMHGLPNQSVESALDDLNQALAC 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DHLS YQLTIE+ T F+K       +LP E    D+    +++    G   YE+S  +
Sbjct: 190 GGDHLSWYQLTIERNTEFFKRPP----ILPQEKALGDIQERGEALLLGQGFEQYEVSAFA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNLNYW++GDY+G+G GAH ++   +  +     + P  +L+ ++    A  +
Sbjct: 246 RPGQQCHHNLNYWQFGDYLGVGAGAHGKITDSTGILRTQRTRLPRDYLQSIKD--QAPPK 303

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
           +  +++   A EF+M  LRLR+G S        G       E  R+L+ +G I  +  S 
Sbjct: 304 QTRVAASDLAGEFMMNALRLRQGFSTDLLLQRTGLGTGSVNETLRSLESKGLIA-IGDSN 362

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T  G   LD V+   
Sbjct: 363 ISATALGWRFLDDVVGEF 380


>gi|281340024|gb|EFB15608.1| hypothetical protein PANDA_012970 [Ailuropoda melanoleuca]
          Length = 342

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 189/324 (58%), Gaps = 6/324 (1%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
            WP+C K+C YC+FN ++ R  V +       +TE Q + +L+G + + S+FFGGGTPSL
Sbjct: 18  QWPYCEKRCSYCNFNKYIPR-GVEEAAMRSCLVTEAQTLLRLSGVQRVESVFFGGGTPSL 76

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P  +A +L+ + +   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL++ 
Sbjct: 77  ASPNTVAAVLEAVDQISHLPADSEVTLEANPTSASGSKLAAFGAAGVNRLSIGLQSLDDT 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            LR LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L    DHL
Sbjct: 137 ELRLLGRTHSASDALQTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQTLLGCCDDHL 196

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           SLYQLT+E+GT  +   + G L  P   +  ++Y   +++    G   YE+SN +  GA 
Sbjct: 197 SLYQLTLERGTALFTQVQRGTLPAPDPELTAEMYQEGRAVLREAGFRQYEVSNFARNGAL 256

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEK 318
           S HN  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V   GH+   +
Sbjct: 257 STHNWTYWQCGQYLGIGPGAHGRFVLQGAGGHTREARIQTLEPDNWMKEVMLFGHSTRRR 316

Query: 319 EFLSSEQQADEFLMMGLRLREGIS 342
             L   +  +E L MGLR   GI+
Sbjct: 317 VPLGQLELLEEVLAMGLRTDVGIT 340


>gi|323493574|ref|ZP_08098695.1| HemN family oxidoreductase [Vibrio brasiliensis LMG 20546]
 gi|323312097|gb|EGA65240.1| HemN family oxidoreductase [Vibrio brasiliensis LMG 20546]
          Length = 390

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/397 (36%), Positives = 212/397 (53%), Gaps = 34/397 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  +  + ++ +I + L    T+++  +    PR + S
Sbjct: 8   ALSLYVHIPWCVQKCPYCDFNSHALKADIPEQEYIAALLQDLETDIERYQLNNSPRPLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L GI       S++EIT+EANP ++E   F GY+KAGV RI
Sbjct: 68  IFIGGGTPSLISAEGIATLLQGIEARIPFKSDIEITMEANPGTIEAERFAGYQKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 128 SVGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSVEQALADLD 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   YE
Sbjct: 188 KAIELDPPHLSWYQLTIEPNTMFYYKQP----TLPDDDDLWDIFEQGHKKLADAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L      
Sbjct: 244 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAFDN- 302

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAG-------RNLDIEC 358
               + K +LS E + D      EF M   RL E    +D+    G         +D   
Sbjct: 303 ----MVKPYLSDETEVDDTDRPFEFFMNRFRLIEACPKQDFLDTTGLGFTAIQETIDWAI 358

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E+     G+I+    S  + T++G   L+ ++    V
Sbjct: 359 EK-----GYIDESD-SHWQITKKGKLFLNDLLEAFMV 389


>gi|325918112|ref|ZP_08180267.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325535658|gb|EGD07499.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 385

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 203/337 (60%), Gaps = 7/337 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R + S+FFG
Sbjct: 8   PLSLYVHLPWCVRKCPYCDFNSHAVKGVLPFEEYVDALIRDLDADLPLVWGRVVHSVFFG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + I  +L   A     + N+EIT+E NP + E   F+ YR AGVNR+S GV
Sbjct: 68  GGTPSLFPAEAIDRLLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGVNRLSFGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++ +L+ LGR H++++A  AI LA++  +  ++ DL+YALP+QT+ Q E +L+RA +
Sbjct: 128 QTFDDVALQRLGRIHDSADAERAIKLAQDAGYDNVNIDLMYALPEQTLLQAEHDLERAFA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T+F+     G   +P ++ A D+    Q++ +  G   YE+S +
Sbjct: 188 LQPTHMSHYQLTLEPNTVFFARPPKG---IPDDDAAWDIQEHCQALLAEAGYAQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS--IEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  G+ +  +     KHP+++L     +  +
Sbjct: 245 AKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAQQHVLRRWKHKHPQTYLASA-GSAAS 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   E +  E+   E+++  LRL EG  + D+E   G
Sbjct: 304 IGGDEIVPLERLPFEYMLNLLRLHEGFRLSDFEASTG 340


>gi|94309795|ref|YP_583005.1| coproporphyrinogen III oxidase [Cupriavidus metallidurans CH34]
 gi|93353647|gb|ABF07736.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           [Cupriavidus metallidurans CH34]
          Length = 419

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 198/345 (57%), Gaps = 10/345 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           GS  L +YVH P+CV+KCPYCDFNSH        +++ ++ ++ +   +++    L   R
Sbjct: 37  GSPPLSLYVHIPWCVRKCPYCDFNSHAAPGKPDSHEIPEDAYLDALRADLEQSLPLVWGR 96

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  YR +G
Sbjct: 97  PVHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEANPGTFEAERFASYRASG 156

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+S+G+QS  +  L+ LGR H   EA AAI +A   F  ++ DL+YALP QT+ +   
Sbjct: 157 INRLSIGIQSFNDAHLKALGRIHGEREARAAIDIALKHFDNVNLDLMYALPGQTLDECAR 216

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L  ALSY   HLSLY LT+E  TLF K        LP E+ A ++ ++ ++ T+  G  
Sbjct: 217 DLDAALSYGTTHLSLYHLTLEPNTLFAKFPP----ALPDEDTAYEMQDIVEARTAQAGYR 272

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE S ++    E+ HNLNYWR+GDY+GIG GAH ++   +  +     KHP ++++   
Sbjct: 273 HYETSAYAKPHREARHNLNYWRFGDYLGIGAGAHGKLSFPNRILRQMRHKHPATYMEQAL 332

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             G+AV E   + +++   EF++  LRL +G+    +    G  L
Sbjct: 333 A-GNAVQEAREVGADELPFEFMLNALRLTDGVPASSFHDYTGLPL 376


>gi|227325981|ref|ZP_03830005.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 379

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/379 (35%), Positives = 213/379 (56%), Gaps = 18/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDDRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERV 371
            ++  ++++ +  EF M   RL E    +D+    G  LD  C R        QG++   
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPREDFTAYTG--LDEHCIRPQLDLALAQGYLTET 354

Query: 372 QFSRLRCTQRGMTMLDSVI 390
             +  + T+ G   L+S++
Sbjct: 355 A-THWQITEHGKLFLNSLL 372


>gi|240080124|ref|ZP_04724667.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268596276|ref|ZP_06130443.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268550064|gb|EEZ45083.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
          Length = 391

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|89091919|ref|ZP_01164874.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
 gi|89083654|gb|EAR62871.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
          Length = 380

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 141/379 (37%), Positives = 218/379 (57%), Gaps = 16/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH +R ++ ++ +I+  L +++        R+I SIF GG
Sbjct: 8   LSLYIHVPWCIRKCPYCDFNSHAQRGELPEQAYIECLLEDLRSELHFAQGRTIQSIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +  +   +L GI     +  + EIT+EANP + E   F GY+ AG+NR+S+G+Q
Sbjct: 68  GTPSLFQADSFKRLLLGINAIIPIERDAEITLEANPGTFEQEKFIGYKDAGINRLSIGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S     L+ LGR H++ EA+ A  LAR IFPR++ DL++ LP Q+ T    +LQ+A+   
Sbjct: 128 SFNNNHLQALGRIHSSDEAVRAATLAREIFPRLNLDLMHGLPSQSETDAIADLQQAIDLD 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS YQLTIE  T FY         LP +     +    Q + + H L  YEIS ++ 
Sbjct: 188 PDHLSWYQLTIEPNTEFYSKSPS----LPVDETLWGIQEQGQQLLADHLLAQYEISAYA- 242

Query: 259 LGAE--SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS--IEKHPESWLKMVRKNGHA 314
            G +  S HNLNYW +GDYIGIG GAH ++ +      I    +K P+++++   +    
Sbjct: 243 KGEQFKSRHNLNYWSFGDYIGIGAGAHGKITLPDEDRIIRRWKQKQPKAYMQSTTR---- 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIEC-ERNLQRQGFIERVQ 372
           +   + ++ E++A EF+M  LRL  G+ V+ +    G  L D+     N + +G +E+  
Sbjct: 299 LTGDQPITREERAFEFMMNALRLYHGVPVELFAERTGLPLTDVSALLDNARGKGLLEKGT 358

Query: 373 FSRLRCTQRGMTMLDSVIA 391
             RL  TQ G   L+ +++
Sbjct: 359 -DRLAPTQHGRLFLNDLLS 376


>gi|10433428|dbj|BAB13962.1| unnamed protein product [Homo sapiens]
          Length = 442

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/379 (35%), Positives = 219/379 (57%), Gaps = 19/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + +++E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTVAAVLEAVAQAAHLPADLEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRTHSACDALRTLAEARGLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H  E+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQCEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTM 385
            ++ +    LRC+  G+ +
Sbjct: 398 LLQ-LDHRGLRCSWEGLAV 415


>gi|296160049|ref|ZP_06842869.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
 gi|295889795|gb|EFG69593.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
          Length = 409

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 196/327 (59%), Gaps = 6/327 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     EN ++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGDTFPENEYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A   F   + DL++ALP QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSAQARHAVEVASTTFDNFNLDLMFALPGQTLAECQTDVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 268 AQPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPTTFIEQA-KAGTAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E+  + +     EF++  LRL EG  V
Sbjct: 327 EEHEVGTRDLPFEFMLNALRLVEGFPV 353


>gi|323527038|ref|YP_004229191.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
 gi|323384040|gb|ADX56131.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
          Length = 409

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 125/327 (38%), Positives = 199/327 (60%), Gaps = 6/327 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   EN ++ +   +++    L   R + ++F 
Sbjct: 32  PLSLYVHFPWCVRKCPYCDFNSHEWKGETFPENDYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A + F   + DL++ALP+QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSTQARRAVEVAASTFDNFNLDLMFALPRQTLAECQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYGRYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYW +GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 268 AKPHRQSKHNLNYWGFGDYLGIGAGAHTKLSFPNRVLRQARYKHPATFIEQA-KAGAAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E+  +S+     EF++  LRL EG  V
Sbjct: 327 EEHEVSARDLPFEFMLNALRLVEGFPV 353


>gi|301631758|ref|XP_002944962.1| PREDICTED: oxygen-independent coproporphyrinogen-III oxidase-like
           protein HI_0463-like [Xenopus (Silurana) tropicalis]
          Length = 398

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 215/377 (57%), Gaps = 13/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH P+C++KCPYCDFNSH  +   + ++ +I + + +++    L   R++ SIF 
Sbjct: 23  PLSLYVHLPWCLRKCPYCDFNSHAMQAGTLPEQRYIDALVADLEAALPLVWGRTVHSIFI 82

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P +I  +L  +     + ++ E T+EANP + E   F+ +R AGV R+S+G
Sbjct: 83  GGGTPSLFSPDSIDRLLSDLRARLRIEADCETTLEANPGTFEKERFRAFRAAGVTRLSIG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS ++  L+ LGR HN ++A+AA+  A   F   + D++YALP Q+M   E +L+ AL+
Sbjct: 143 VQSFDDGHLQALGRVHNRAQALAAVQEAAQAFETFTLDIMYALPGQSMADLERDLETALA 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLS+Y LTIE  T F K        LP  + A  + +    +T A GL  YE+S +
Sbjct: 203 FAPPHLSVYHLTIEPNTWFAKHPP----ALPEGDEAYAMLDRITEMTGAAGLTRYEVSAY 258

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G + +HN NYW++GDY+GIG GAHS++   +HR+   +  + P  ++      G AV
Sbjct: 259 ARKGHQCVHNGNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRYREPRRYMDKALA-GCAV 316

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
            + E +       E+++  LRLR+G +++ +    G  +     R L   +R+G I R  
Sbjct: 317 AQDEDVRRADLPFEYMLNALRLRQGFALQHFCERTGLPV-TAIARGLEQAERKGLIVR-D 374

Query: 373 FSRLRCTQRGMTMLDSV 389
              +R T+RG   L  +
Sbjct: 375 MGHVRPTERGFDFLSDL 391


>gi|291405795|ref|XP_002719153.1| PREDICTED: radical S-adenosyl methionine domain containing 1-like
           [Oryctolagus cuniculus]
          Length = 490

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/342 (38%), Positives = 200/342 (58%), Gaps = 12/342 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFL-TEMQWMRQLTGPRSIS 72
           S    +YVHWP+C K+C YC+FN    +Y  G  +E  ++  L TE + + + +G R + 
Sbjct: 38  SARAALYVHWPYCEKRCSYCNFN----KYLPGGVEEVAVRRCLETEARTLLRFSGVRRVE 93

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+FFGGGTPSL  P  +A +L+ +A+   +  + E+T+EANP+S   +    +  AGVNR
Sbjct: 94  SVFFGGGTPSLASPHTVAAVLEAVAQATYLPVDSEVTLEANPTSAASSRLAAFGAAGVNR 153

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QSL++  LR LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +L
Sbjct: 154 LSIGLQSLDDAELRLLGRTHSASDALRTLAEARRLFPGRVSVDLMLGLPAQQVRPWLGQL 213

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +  L    DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   Y
Sbjct: 214 RELLRRCDDHVSLYQLSLERGTALFAQVQQGALPAPDPELAAEMYQEGRAVLRDAGFRQY 273

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKM 307
           E+SN +  GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K 
Sbjct: 274 EVSNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFVPQGAGGHTREARIQTLEPDAWMKE 333

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           V + GH   ++  L   +  +E L MGLR   GI+ + W+  
Sbjct: 334 VMQFGHGTRKRTPLGELELLEEVLAMGLRTDVGITHQHWQQF 375


>gi|107022074|ref|YP_620401.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia AU 1054]
 gi|116689018|ref|YP_834641.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia HI2424]
 gi|170732307|ref|YP_001764254.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia MC0-3]
 gi|105892263|gb|ABF75428.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia cenocepacia AU 1054]
 gi|116647107|gb|ABK07748.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia cenocepacia HI2424]
 gi|169815549|gb|ACA90132.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia MC0-3]
          Length = 404

 Score =  249 bits (635), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 214/375 (57%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  + +++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGTAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|15838108|ref|NP_298796.1| coproporphyrinogen III oxidase [Xylella fastidiosa 9a5c]
 gi|9106539|gb|AAF84316.1|AE003980_8 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 383

 Score =  249 bits (635), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 215/379 (56%), Gaps = 12/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F G
Sbjct: 6   PLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVFLG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   A    ++ + EIT+E NP + E   F  Y  AG+NR+S G+
Sbjct: 66  GGTPSLFPPEAIDRFLQIAAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSFGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA +
Sbjct: 126 QSFNDVALRRLGRIHDSLQAEHAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRAFA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+FY     G   +P ++ A ++   TQ + +  G   YE+S +
Sbjct: 186 LAPTHLSYYQLTLEPNTVFYARPPQG---IPDDDAAWEMQEHTQRLLAEAGYQHYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L        A
Sbjct: 243 AREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDNA-GTVSA 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE---RV 371
           +   E + + +   E+++  LRLR G  ++D+ +  G  L +E       +       R 
Sbjct: 302 IGGDEIVPTARLPFEYMLNLLRLRAGFRLQDFAVRTG--LTVESIHAALSEAVARGWLRC 359

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  R+  T+ G+   + VI
Sbjct: 360 ELERVIPTELGLRFANDVI 378


>gi|167586473|ref|ZP_02378861.1| coproporphyrinogen III oxidase [Burkholderia ubonensis Bu]
          Length = 404

 Score =  249 bits (635), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 213/375 (56%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+A++A AA+ +A N F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNETHLKALGRIHDAAQARAAVEVAANTFDNFNLDLMFALPNQTLDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPHHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLIAR-DFA 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|224824835|ref|ZP_03697942.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
 gi|224603328|gb|EEG09504.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
          Length = 396

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 212/375 (56%), Gaps = 9/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CV+KCPYCDFNSH  +    ++ ++ + L +++        R + +IF GG
Sbjct: 20  LSLYIHFPWCVRKCPYCDFNSHEVKNGFDEDAYVAALLADLESALPAVWGRPVHTIFMGG 79

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   + +  +L GI     +  + EIT+EANP + E + F+G+R+AG+NR+S+G+Q
Sbjct: 80  GTPSLFSARAMDTLLAGIRARVRLYPDAEITMEANPGTFESDKFKGFREAGINRLSIGIQ 139

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +   L+ LGR H+  +A  A+ +A   F  ++ DL+YALP QT+ Q   ++  ALS+ 
Sbjct: 140 SFDPAHLKALGRIHHGDDARRAVDIALTHFDNVNLDLMYALPGQTLEQALTDMGTALSFG 199

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LTIE  TLF +        LP + ++ D+    ++  +  G   YE S  + 
Sbjct: 200 VTHVSAYHLTIEPNTLFARYLPPK---LPDDELSADMQEALEARLTEAGFGHYETSAFAR 256

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNLNYW++GDY+GIG GAH+++      V     K P ++LK V   G     +
Sbjct: 257 PGRECRHNLNYWQFGDYLGIGAGAHAKISAHDGIVREMRYKQPAAYLKAV-AEGRPTQSR 315

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E ++   +  EF+M  LRL +G  ++ +    G  L    +R L   + QG IER   + 
Sbjct: 316 ERIARADRPFEFMMNLLRLTDGFELRLFAERTGLPL-THIQRELAEAEAQGLIER-DLTT 373

Query: 376 LRCTQRGMTMLDSVI 390
           L+ T +G   L+ ++
Sbjct: 374 LKPTLKGQRFLNDLL 388


>gi|261401086|ref|ZP_05987211.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria lactamica ATCC 23970]
 gi|269208978|gb|EEZ75433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria lactamica ATCC 23970]
          Length = 391

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + ++FFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETVFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALENAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMRCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEQGRLFLNDLL 387


>gi|319761727|ref|YP_004125664.1| oxygen-independent coproporphyrinogen iii oxidase [Alicycliphilus
           denitrificans BC]
 gi|317116288|gb|ADU98776.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans BC]
          Length = 411

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/380 (35%), Positives = 216/380 (56%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +YVH P+C++KCPYCDFNSH        + +  +  + + +++    L   R++ SI
Sbjct: 34  PLSLYVHLPWCLRKCPYCDFNSHQAPGGSEALPEARYTAALVADLEAALPLVWGRTVHSI 93

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL  P+ +  +L  I     + +  E+T+EANP + E   F+ YR AGV R+S
Sbjct: 94  FIGGGTPSLFSPEAMDRLLGDIRARLPLDAGCEVTLEANPGTFEKERFRAYRGAGVTRLS 153

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQS  ++ L+ LGR H+ ++A+AA+  A   F   + D++YALP QT  + E ++++A
Sbjct: 154 IGVQSFNDRHLQALGRVHDRAQALAAVEEAAQAFETFNLDIMYALPGQTPAEQEQDMRQA 213

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ A  H+S+Y LTIE  T F K        LP ++ A  + +    +T+A GL  YE+S
Sbjct: 214 LALAPPHISIYHLTIEPNTYFAKYPPR----LPEDDQAYAMLDRITELTAAAGLSRYEVS 269

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGH 313
            ++  G +  HN NYW++GDY+GIG GAHS++   +HR+   +  + P+ ++      G 
Sbjct: 270 AYAREGHQCQHNRNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRLRDPQLYMTGALA-GR 327

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERV 371
           A+ + E +       EF++  LRLREG +++D+    G+ L    +  +  + +G I R 
Sbjct: 328 AIAQDEDVRRADLPFEFMLNALRLREGFALQDFTERTGQPLTAIAQGLQQAEARGLIAR- 386

Query: 372 QFSRLRCTQRGMTMLDSVIA 391
               +R T+RG   L  + A
Sbjct: 387 DMGHVRPTERGFDFLSDLQA 406


>gi|325275641|ref|ZP_08141540.1| HemN family oxidoreductase [Pseudomonas sp. TJI-51]
 gi|324099228|gb|EGB97175.1| HemN family oxidoreductase [Pseudomonas sp. TJI-51]
          Length = 391

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + LT++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVAALLTDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    ++++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSAGALGRLLRGVEQRIPFAADIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLQALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLEDALGDLRQAMD 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+    +    LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMAEHGFRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+  + + + P+ +L + +   +  
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKP--YKA 311

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            EK  L  ++   EFLM  LRL +G+  + +    G  L+   E  R  +++G ++ V+ 
Sbjct: 312 GEK-LLPVDELPFEFLMNALRLTDGVEAQLFTQRTGLPLEQLREARRAAEQKGLLQ-VES 369

Query: 374 SRLRCTQRGMTMLDSVI 390
            RL  T RG   L+ ++
Sbjct: 370 DRLVATPRGQLFLNDLL 386


>gi|194097947|ref|YP_002000993.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
 gi|239998420|ref|ZP_04718344.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|240015984|ref|ZP_04722524.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA6140]
 gi|268594282|ref|ZP_06128449.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|193933237|gb|ACF29061.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
 gi|268547671|gb|EEZ43089.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|317163706|gb|ADV07247.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 391

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|83746456|ref|ZP_00943507.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
 gi|83726787|gb|EAP73914.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
          Length = 425

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 221/384 (57%), Gaps = 14/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +E F+ +   +++    +   R + +
Sbjct: 41  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPDQGIPEERFLAAVRQDLEAALPMVWGRRVHT 100

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 101 IFIGGGTPSLLSAQGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 160

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  LR LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 161 SIGIQSFNDAHLRALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 220

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 221 ALSFETSHVSLYHLTLEPNTYFAKYPP----ALPDDDTAFGMQDWIHARLAAAGYEHYEV 276

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  +HPE++L+     G
Sbjct: 277 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVLREMRHRHPETYLRQAETAG 335

Query: 313 HAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGF 367
            A V  E+  + +     EF++  LRL  G  V  ++   G   R ++ E +   QR G 
Sbjct: 336 GAAVLQEQREVDAADLPFEFMLNALRLTGGFPVTLFQERTGLPLRAIERELDAAEQR-GL 394

Query: 368 IERVQFSRLRCTQRGMTMLDSVIA 391
           + R   + +R T+ G   L+ + A
Sbjct: 395 LARDHVA-IRPTELGQRFLNDLQA 417


>gi|330505400|ref|YP_004382269.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
 gi|328919686|gb|AEB60517.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
          Length = 384

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 218/379 (57%), Gaps = 16/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++    Q    R ++SIFFG
Sbjct: 11  PLALYIHIPWCVRKCPYCDFNSHAAGPTLPEEEYVDALLADLDIDLQHVHGRPLTSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    + ++EIT+EANP + E   F+GYR  G+NR+S+GV
Sbjct: 71  GGTPSLFSDRALGRLLEGVEQRVGFAPDIEITLEANPGTFEQAKFKGYRSLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR H+ SEA+ A  +AR   F   + DL++ LP+Q++     +L+ A+S
Sbjct: 131 QSFQEAKLKALGRIHDGSEAVRAADMARAAGFDNFNLDLMHGLPEQSIEDALFDLRTAIS 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ +A G   YE+S +
Sbjct: 191 QGPTHLSWYQLTMEPNTVFWSQPP----TLPEDDLLWDIQEAGQALLAAEGYAQYEVSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR--KNGH 313
           +  G ++ HNLNYW +GD++GIG GAH+++   + R+  + + + P+ +L   +  + G 
Sbjct: 247 ARPGKQARHNLNYWTFGDFLGIGAGAHAKLSAPAGRIQRTWKTRLPKDYLDPAKVFQAGE 306

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
            V+E   L       E+LM  LRL  G   + +    G  L    +  R  +RQG ++  
Sbjct: 307 RVLEASELPF-----EYLMNVLRLTGGAPAELFSQRTGLPLQQLEQARREAERQGLLQ-A 360

Query: 372 QFSRLRCTQRGMTMLDSVI 390
             +RL  T +G   L+ ++
Sbjct: 361 DPTRLVATAKGQLFLNDLL 379


>gi|218710635|ref|YP_002418256.1| coproporphyrinogen III oxidase [Vibrio splendidus LGP32]
 gi|218323654|emb|CAV19953.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           [Vibrio splendidus LGP32]
          Length = 395

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 146/386 (37%), Positives = 215/386 (55%), Gaps = 22/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++       QL G PR + S
Sbjct: 10  ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEKEYIDALLEDLDTDIEKYQLNGAPRPLHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAG+ RI
Sbjct: 70  IFIGGGTPSLFSPEGIGRLLQGIEQRIPFKPEIEITMEANPGTIEAERFAGYQKAGITRI 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +L 
Sbjct: 130 SVGVQSFEQEKLERLGRIHGQDEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALADLD 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           RA+     HLS YQLTIE  T+F YK  K     LP ++   D+++L     +  G   Y
Sbjct: 190 RAIELNPPHLSWYQLTIEPNTMFYYKTPK-----LPDDDDLWDIFDLGHKKLADAGYVQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK 310
           EIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   + 
Sbjct: 245 EISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQN 304

Query: 311 NGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----IECERNLQR 364
                +  E  + +E +  EF M   RL E    +D+    G   D     IE  ++L  
Sbjct: 305 LVKPYLSDELEVPNEDRPFEFFMNRFRLMEACPKQDFIDTTGLEFDSIQPTIEWAKDL-- 362

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVI 390
            G++     S  + T++G   L+ ++
Sbjct: 363 -GYLNETD-SHWQITEKGKLFLNDLL 386


>gi|240013545|ref|ZP_04720458.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI18]
 gi|240115078|ref|ZP_04729140.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|240120617|ref|ZP_04733579.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID24-1]
 gi|240125171|ref|ZP_04738057.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
 gi|268600752|ref|ZP_06134919.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|268683766|ref|ZP_06150628.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
 gi|268584883|gb|EEZ49559.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|268624050|gb|EEZ56450.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
          Length = 391

 Score =  248 bits (634), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 202/374 (54%), Gaps = 4/374 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 DATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGTLEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRL 376
           ++ +++E    EF+M  LRL +G+     +   G     I  +    RQ  +     +  
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVF 373

Query: 377 RCTQRGMTMLDSVI 390
           R T++G   L+ ++
Sbjct: 374 RPTEKGRLFLNDLL 387


>gi|254246046|ref|ZP_04939367.1| Coproporphyrinogen III oxidase [Burkholderia cenocepacia PC184]
 gi|124870822|gb|EAY62538.1| Coproporphyrinogen III oxidase [Burkholderia cenocepacia PC184]
          Length = 404

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 214/375 (57%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  + +++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAVKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGTAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|329120740|ref|ZP_08249402.1| coproporphyrinogen dehydrogenase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327460537|gb|EGF06873.1| coproporphyrinogen dehydrogenase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 391

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 119/326 (36%), Positives = 185/326 (56%), Gaps = 3/326 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALNDVQTAITT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV 343
           ++ ++++    EF+M  LRL +G+  
Sbjct: 314 RKTVAADDLPFEFMMNALRLTDGVPA 339


>gi|270263063|ref|ZP_06191333.1| hypothetical protein SOD_d00780 [Serratia odorifera 4Rx13]
 gi|270042751|gb|EFA15845.1| hypothetical protein SOD_d00780 [Serratia odorifera 4Rx13]
          Length = 379

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 215/377 (57%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     L G R IS+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDADLPLAGGREISTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F GY++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQSLLDGVRARIRVADDAEITMEANPGTVEADRFSGYQRAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSAEKLTRLGRIHGPEEAKRAAHLATGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFERGHQLLSAAGYRQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTAKTKHPRGFMQ-----GKYMD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
           ++  +++  +  EF M   RL E     D+    G +  +   + +  L++    E  ++
Sbjct: 298 KQHEVTTADRPFEFFMNRFRLLEAAPRADFAHYTGLDESVIRPQLDEALEKGYLEETAEY 357

Query: 374 SRLRCTQRGMTMLDSVI 390
            ++  T++G   L+S++
Sbjct: 358 WQI--TEKGKLFLNSLL 372


>gi|312963629|ref|ZP_07778110.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas fluorescens WH6]
 gi|311282138|gb|EFQ60738.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas fluorescens WH6]
          Length = 400

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 213/379 (56%), Gaps = 16/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++         R +SSIFFG
Sbjct: 27  PLALYIHIPWCVRKCPYCDFNSHTASQVLPEEEYVDALLDDLDQDLHAVYGRELSSIFFG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+      + ++EIT+EANP + E   F  YRK G+NR+S+GV
Sbjct: 87  GGTPSLFSAAALGRLLKGVEARIPFAGDIEITLEANPGTFEQEKFVAYRKLGINRLSIGV 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A++
Sbjct: 147 QSFQQEKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPNQSLDDALSDLRQAIA 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+        VLP ++   D+    Q++ + HG   YE+S +
Sbjct: 207 LKPTHLSWYQLTLEPNTVFWNQPP----VLPEDDTLWDIQEAGQALLAEHGYRQYEVSAY 262

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +      
Sbjct: 263 AQPGRPARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRAPKDYLNPAKPFQAGA 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIERV 371
            E   L++E+   EFLM  LRL EG+  + +    G  LD     E  R  ++ G ++ V
Sbjct: 323 KE---LTNEELPFEFLMNALRLTEGVEARLYAERTG--LDQASLAEGRREAEQSGLMQ-V 376

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           + SRL  T RG   L+ ++
Sbjct: 377 EPSRLAATDRGQLFLNDLL 395


>gi|241663554|ref|YP_002981914.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12D]
 gi|240865581|gb|ACS63242.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12D]
          Length = 422

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/382 (37%), Positives = 222/382 (58%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +E F+ +   +++    +   R + +
Sbjct: 38  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEQGIPEERFLAAVRQDLEAALPMVWGRHVHT 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 98  IFIGGGTPSLLSAQGLDRLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 158 SIGIQSFNDAHLQALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 217

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+  +H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 218 ALSFDTNHVSLYHLTLEPNTYFAKYPP----ALPDDDAAFAMQDWIHARLAAAGYEHYEV 273

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  KHP+++L+     G
Sbjct: 274 SAYAKAGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVIREMRHKHPDTYLRQAETAG 332

Query: 313 HAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGF 367
            A V  E+  + +     EF++  LRL +G  V  ++   G  L    ER L   +++G 
Sbjct: 333 GAAVMQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLR-SIERQLDVAEQRGL 391

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           + R   + +R T+ G   L+ +
Sbjct: 392 LTRDHVA-IRLTELGQRFLNDL 412


>gi|83648998|ref|YP_437433.1| coproporphyrinogen III oxidase-like protein [Hahella chejuensis
           KCTC 2396]
 gi|83637041|gb|ABC33008.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Hahella chejuensis KCTC 2396]
          Length = 388

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/390 (37%), Positives = 220/390 (56%), Gaps = 20/390 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGP 68
           G  +  L +YVH P+CV+KCPYCDFNSH  R ++ +  ++Q+ L    TEM  + Q+ G 
Sbjct: 8   GLHTPPLALYVHIPWCVRKCPYCDFNSHTARSELPEREYLQALLSDLDTEMFRLEQIGGK 67

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R++ SIFFGGGTPSL+ P  IA ++DG  +      ++EIT+EANP +V+   F+   + 
Sbjct: 68  RALGSIFFGGGTPSLLSPDIIASVIDGARQRLGFHDDIEITLEANPGTVDEAKFKDLFQG 127

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR+SLGVQS + + L  LGR HN  +AI A+  AR   F   + DL++ LP Q++   
Sbjct: 128 GVNRLSLGVQSFQPELLTTLGRIHNGEDAIRAVDKARQAGFDNFNLDLMHGLPGQSLQHA 187

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L  A+S    HLS YQLTIE  T FY+        LP ++   +++       +  G
Sbjct: 188 MEDLDTAISLGPTHLSWYQLTIEPNTEFYRHPPQ----LPEDDTLWEIHENGCERLAQAG 243

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWL 305
            + YEIS  +  G ES HNLNYWR+GDY+ IG GAH ++  GS    I   K   P+ +L
Sbjct: 244 YNQYEISAFAQTGKESRHNLNYWRFGDYLAIGAGAHGKL-TGSSGDVIRYWKTRLPQHYL 302

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQR 364
             +    +    +E   + +   +FLM  LRLREG+  +      G  +  +E + +  R
Sbjct: 303 SRI---DNYTAGEEITPAHEAGVDFLMNALRLREGVEEELLVRRTGVGVSLLEPQLSEAR 359

Query: 365 Q-GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           Q G++   Q  RL+CT+ G   L++V+ + 
Sbjct: 360 QKGWL---QADRLQCTELGYRHLNAVLTHF 386


>gi|160897476|ref|YP_001563058.1| oxygen-independent coproporphyrinogen III oxidase [Delftia
           acidovorans SPH-1]
 gi|160363060|gb|ABX34673.1| oxygen-independent coproporphyrinogen III oxidase [Delftia
           acidovorans SPH-1]
          Length = 414

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 218/380 (57%), Gaps = 19/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +YVH P+C++KCPYCDFNSH       ++ ++ +I + + +++    L   R++ SIF
Sbjct: 38  LSLYVHLPWCIRKCPYCDFNSHEHGRDGPELPEDRYIDALVADLESALPLIWGRTVHSIF 97

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++I  +L  I     + ++ EIT+EANP + E + F+ +R AGV R+S+
Sbjct: 98  IGGGTPSLFAPESIDRLLAAIRARLRMEADCEITMEANPGTFETDRFRAFRAAGVTRLSI 157

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ L+ +GR H+ ++A AA+  A + F   + DL+YALP QT      +L  A+
Sbjct: 158 GVQSFDDRLLQAVGRVHDGAQARAAVREAADSFETFNIDLMYALPGQTELDLARDLDVAM 217

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+A  HLS+Y LTIE  T F K        +P +++A D+ +   + T+A G+  YEIS 
Sbjct: 218 SFAPPHLSVYHLTIEPNTYFAKFPP----AIPEDDLAYDMLDRITARTAAAGMQRYEISA 273

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           ++  G +  HN NYW++GDY+GIG GAHS++   +HR+   +  + P  ++         
Sbjct: 274 YAREGHQCWHNRNYWQFGDYLGIGAGAHSKLSF-AHRIVRQVRFRDPARYMDQALAGAPL 332

Query: 315 VVEKEFLSSEQQAD---EFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIE 369
             + E     ++AD   E+++  LRLREG +++D+    G  L    +     Q +G I 
Sbjct: 333 AQDGEV----RRADLPFEYMLNALRLREGFALQDFMERTGLPLSSIAKGLDAAQAKGLIT 388

Query: 370 RVQFSRLRCTQRGMTMLDSV 389
           R    R+  T+RG   L  +
Sbjct: 389 R-DLGRVVPTERGFDFLSDL 407


>gi|134095309|ref|YP_001100384.1| coproporphyrinogen III oxidase [Herminiimonas arsenicoxydans]
 gi|133739212|emb|CAL62261.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Herminiimonas arsenicoxydans]
          Length = 414

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 216/374 (57%), Gaps = 10/374 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH+P+CVKKCPYCDFNSH       ++ ++ +   +++    L   R I +IF GG
Sbjct: 41  LSLYVHFPWCVKKCPYCDFNSHEATGGFPEDEYLSALRADLEQALPLIWGRKIYTIFIGG 100

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +L  I     +   VEIT+EANP + E   F+ YR +GVNR+S+G+Q
Sbjct: 101 GTPSLLSAKGLDRLLSDIRTLLPLDGAVEITMEANPGTFEAEKFKSYRSSGVNRLSIGIQ 160

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L+ LGR H+  EA  A+ +A   F   + DL+YALP QT+ +   ++Q A+++A
Sbjct: 161 SFNARHLQALGRIHDGDEARRAVDIAMANFENFNLDLMYALPSQTLEEARQDVQTAIAFA 220

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLY LT+E  T+F K       V+P ++ + D+ ++    T+A G   YE+S ++ 
Sbjct: 221 PPHLSLYHLTMEPNTVFAKYPP----VVPDDDASADMQDMIAEETTAAGYQHYEVSAYAQ 276

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ++ HNLNYW++GDY+GIG GAH+++      +  +  K P+S+++ +R  G+ + E+
Sbjct: 277 PKRQARHNLNYWQFGDYLGIGAGAHTKLSFPHRVIRQARYKQPKSYMEQMRL-GNPIQEE 335

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
             +S  +   EF++  +RL  G+ V  +    G  L+   ER L   + +G + R     
Sbjct: 336 TEISRSELGFEFMLNAMRLTNGVEVNLFADRTGMPLNA-IERALRAAEDKGLLYR-DHKT 393

Query: 376 LRCTQRGMTMLDSV 389
           ++ T+ G   L+ +
Sbjct: 394 IKPTELGQRFLNDL 407


>gi|209519148|ref|ZP_03267953.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
 gi|209500448|gb|EEA00499.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
          Length = 409

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 216/377 (57%), Gaps = 9/377 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   E +++++   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGETFPEGDYLEALRADLEMALPLIWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E + F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDSMLSDIRALLPLDADAEITLEANPGTFEADKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+A++A  A+ +A   F   + DL++ALP QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDAAQARHAVEVAATTFDNFNLDLMFALPGQTLAECQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     T+  G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHQRTAEAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  V  +  KHP ++++  R  G +V 
Sbjct: 268 ARPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRIVRQARYKHPTTFIEQARA-GASVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECE-RNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G ++  IE      +R+  I R    
Sbjct: 327 EEHEVGPRDLPFEFMLNALRLVEGFPVHRFIERTGLSITTIEAALEEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIA 391
           R+  T  G   L+ + A
Sbjct: 386 RIAPTPLGQAFLNDLQA 402


>gi|297537274|ref|YP_003673043.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
 gi|297256621|gb|ADI28466.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
          Length = 382

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 198/339 (58%), Gaps = 8/339 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +Y+H P+CVKKCPYCDFNSH  R+K G   +  ++ + + +++        R I S+F
Sbjct: 7   LSLYIHIPWCVKKCPYCDFNSHESRHKDGAIPESAYVDALIADLELATPKVWGRKIKSVF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL   + I  IL  +     +  + EIT+EANP +V+  NF GY++AGVNR+SL
Sbjct: 67  FGGGTPSLFSAEAIDRILSHVRMLTPLEFDAEITLEANPGTVDAANFVGYKQAGVNRLSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS +   L+ LGR H++ +A AA+ LA   F +++ D++Y LP Q++     + Q A+
Sbjct: 127 GIQSFKSDYLKALGRIHDSEQAFAAVELAMKTFDQVNCDIMYGLPNQSLEDAMQDAQTAV 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLS Y LT+E  T FY+        LP ++ + D+    +++ + +G   YE S 
Sbjct: 187 RLNPTHLSFYHLTLEPNTPFYRTPPS----LPDDDTSSDMQIAIETLLAENGYEHYETSA 242

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ++ HNLNYW++GDY+GIG GAHS++            KHP+++++   + G AV
Sbjct: 243 FAKKGKQAKHNLNYWQFGDYLGIGAGAHSKLSYHDKITREVRPKHPKAYMEQALQ-GKAV 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             +  +   +   EF+M  LRL +G+ V  ++   G N+
Sbjct: 302 EREWLIPQNELGFEFMMNALRLIDGVPVDLFQQRTGLNI 340


>gi|146309173|ref|YP_001189638.1| coproporphyrinogen III oxidase [Pseudomonas mendocina ymp]
 gi|145577374|gb|ABP86906.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas mendocina
           ymp]
          Length = 386

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 220/379 (58%), Gaps = 16/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFF 76
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++   +R + G R ++SIFF
Sbjct: 13  PLALYIHIPWCVRKCPYCDFNSHAAGPTLPEEEYVDALLADLDANLRHVHG-RPLTSIFF 71

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    + ++EIT+EANP + E   F+GYR  G+NR+S+G
Sbjct: 72  GGGTPSLFSDRALGRLLEGVERRVAFAPDIEITLEANPGTFEQAKFKGYRALGINRLSIG 131

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +E  L+ LGR H+ +EA+ A  +AR   F   + DL++ LP+Q++     +L+ A+
Sbjct: 132 VQSFQEAKLKALGRIHDGNEAVRAADMARAAGFDNFNLDLMHGLPEQSIEDALFDLRTAI 191

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    HLS YQLT+E  T+F+        VLP +++  D+    Q++ +A G   YE+S 
Sbjct: 192 SQGPTHLSWYQLTMEPNTVFWSQPP----VLPEDDLLWDIQEAGQALLAAEGYAQYEVSA 247

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR--KNG 312
           ++  G ++ HNLNYW +GD++GIG GAH+++     R+  S + + P+ +L   +  + G
Sbjct: 248 YAQTGKQARHNLNYWTFGDFLGIGAGAHAKLSAPDGRILRSWKTRLPKDYLDPAKVFQAG 307

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERV 371
             V     L +++   EFLM  LRL +G+  + +    G  L  ++  R       + R 
Sbjct: 308 ERV-----LGADELPFEFLMNVLRLTDGVPARLFSERTGLPLASLDAARAEAEGRKLLRA 362

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  RL  T  G   L+ ++
Sbjct: 363 EPERLCATAEGQLFLNDLL 381


>gi|254522825|ref|ZP_05134880.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas sp. SKA14]
 gi|219720416|gb|EED38941.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas sp. SKA14]
          Length = 408

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 200/337 (59%), Gaps = 7/337 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  + ++  + +I + L ++     L   R + S+FFG
Sbjct: 30  PLSLYVHLPWCVRKCPYCDFNSHQAKGELPFDAYIDALLRDLDQDLPLVWGRVVHSVFFG 89

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I   L   +     + N EIT+E NP + E   F  YR AGVNR+S G+
Sbjct: 90  GGTPSLFPPEAIDRFLQQASARLRFAPNAEITLETNPGTAEHGRFDRYRAAGVNRLSFGI 149

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR H++ EA  A+ +A++  +   + DL+YALP+QT+   E +L+RA +
Sbjct: 150 QSFDDAMLKRLGRIHDSGEAERAVKMAQDAGYDNFNIDLMYALPEQTLAGAEADLERAFA 209

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T+F+     G   +P E+ A D+    Q++ +  G   YE+S +
Sbjct: 210 LQPAHISHYQLTLEPNTVFFARPPQG---IPDEDNAWDMQEHCQALLAQAGFGQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +S HNLNYWR+GDY+GIG GAH ++  G+  H +     KHP+++L+       +
Sbjct: 267 ARPGRQSAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKLKHPQAYLESAGTPA-S 325

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               + ++  +   E+++  LRL EG S++D+E   G
Sbjct: 326 FGGDDVIAPGRLPFEYMLNLLRLHEGFSLRDFESRTG 362


>gi|293605629|ref|ZP_06688009.1| coproporphyrinogen III oxidase [Achromobacter piechaudii ATCC
           43553]
 gi|292816009|gb|EFF75110.1| coproporphyrinogen III oxidase [Achromobacter piechaudii ATCC
           43553]
          Length = 406

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 216/375 (57%), Gaps = 9/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH    ++ +  ++ +  ++++        R + S+F GG
Sbjct: 32  LSIYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRSDLEQALPSIWGRQVVSVFIGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  +     +  + EIT+EANP + E + F+ Y  +GV R SLG+Q
Sbjct: 92  GTPSLLSSAGLDELLAMLRACLNLWPDAEITMEANPGTAEASRFRDYAASGVTRFSLGIQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ LGR H+A++A AAI +A++   R++ D+++ALP QT+     +L++A+S+ 
Sbjct: 152 SFDDAQLKKLGRIHDAAQARAAIDMAQHAVSRVNLDMMFALPGQTLEACVADLRQAISFG 211

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLY LT+E  T+F K        LP ++ +  + +  ++  +A GL  YE+S ++ 
Sbjct: 212 TEHLSLYHLTMEPNTVFAKFPP---AELPDDDTSAAMQDAVEAELAAAGLSRYEVSAYAR 268

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKNGHAVV 316
            GA   HNLNYW +GDY+GIGPGAH ++      V  +  + P+SW++  M R   H + 
Sbjct: 269 AGARCRHNLNYWEFGDYLGIGPGAHGKLSFHDRIVREARLRSPDSWMQAAMARDGSH-LA 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFS 374
           E   +  ++   EF++  LRL++G+    +    G +L     +     ++G ++    +
Sbjct: 328 ESRQVGPDELPFEFMLNALRLKDGVPATAFNERTGLSLAAIAHQLEAASKRGLLD-ADPT 386

Query: 375 RLRCTQRGMTMLDSV 389
           RL+ T  G   L+ +
Sbjct: 387 RLKATPLGWRFLNDL 401


>gi|322834243|ref|YP_004214270.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
 gi|321169444|gb|ADW75143.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
          Length = 378

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 214/378 (56%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     L G RS+ +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLHLVGGRSVGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     + +N EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSSEAMQNLLDGVRARLPLDANAEITMEANPGTVEADRFSGYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFDAQKLERLGRIHGPDEATRAAHLATGLNLRSFNLDLMHGLPDQTLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T++          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTMYASRPP----TLPDDDALWDIFEQGDQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +++    +    
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTQPDGQILRTVKTKHPRGYMQGRYMDKQHP 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
           VE E L       EF M   RL E    +++ +  G +  +   + +  + ++  +E   
Sbjct: 302 VETEDLPF-----EFFMNRFRLLEAAPREEFGLYTGLDESVIRAQLDEAITKEYLVETA- 355

Query: 373 FSRLRCTQRGMTMLDSVI 390
            +  + T +G   L+S++
Sbjct: 356 -THWQITGKGKLFLNSLL 372


>gi|37681064|ref|NP_935673.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
 gi|37199814|dbj|BAC95644.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
          Length = 389

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 194/341 (56%), Gaps = 21/341 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++    +  +    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHTLKEQIPEQMYINALLEDLDRDIEKYQLHRAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI K    + ++EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIRDLLQGIEKRIPFTPSIEITMEANPGTIEAERFAGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   YE
Sbjct: 186 KAIELNPPHLSWYQLTIEPNTMFYYKPP----ALPDDDQLWDIFERGHQKLTQAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L      
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKIKHPKGYLA----- 296

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDW 346
            H  + K +L SEQ  +      EF M   RL E    +D+
Sbjct: 297 AHQNMVKPYLDSEQLVEEIDRPFEFFMNRFRLMEACPKQDF 337


>gi|89074113|ref|ZP_01160612.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
 gi|89050049|gb|EAR55575.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
          Length = 387

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 199/348 (57%), Gaps = 25/348 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSI 74
           L +YVH P+CV+KCPYCDFNSH  +  + + ++I + +    T++   + + G R + SI
Sbjct: 7   LSLYVHIPWCVQKCPYCDFNSHALKTDLPELDYIDALIDDLETDLSAYQLINGARPLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI P  I  +L  I +    S ++EIT+EANP +VE   F+ YR+AGVNRIS
Sbjct: 67  FIGGGTPSLISPSEIGRLLKAIEQRILFSDDIEITMEANPGTVEAGRFEAYRQAGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS + + L  LGR H A EAI A  LA+       + DL++ LP Q+++    +L++
Sbjct: 127 IGIQSFQNEKLDRLGRIHGADEAIRAAGLAKKAGLNSFNVDLMHGLPDQSVSDAISDLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    HLS YQLTIE  TL+Y         LP ++   D++     + +  G   YEI
Sbjct: 187 AIALDPPHLSWYQLTIEPNTLYYSKPP----TLPDDDDLWDIFEQGHQLLTEAGYQQYEI 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S +S  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +L+      
Sbjct: 243 SGYSKTGKQCQHNLNYWRFGDYLGIGCGAHGKISFADGQIIRTVKVKHPRGYLQ------ 296

Query: 313 HAVVEKEFLSSEQQ-AD-----EFLMMGLRLREGISVKDWEMLAGRNL 354
               +K +L+ E Q AD     EF M   RL E    +D+    G  L
Sbjct: 297 ---ADKPYLTQENQVADGERPFEFFMNRFRLLESCPKQDFVARTGLAL 341


>gi|320155273|ref|YP_004187652.1| radical SAM family enzyme, coproporphyrinogen III oxidase
           oxygen-independent-like protein clustered with
           nucleoside-triphosphatase RdgB [Vibrio vulnificus
           MO6-24/O]
 gi|319930585|gb|ADV85449.1| radical SAM family enzyme, coproporphyrinogen III oxidase
           oxygen-independent clustered with
           nucleoside-triphosphatase RdgB [Vibrio vulnificus
           MO6-24/O]
          Length = 389

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 194/341 (56%), Gaps = 21/341 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++    +  +    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKEQIPEQMYINALLEDLDRDIEKYQLHRAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI K    + ++EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIRDLLQGIEKRIPFTPSIEITMEANPGTIEAERFAGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   YE
Sbjct: 186 KAIELNPPHLSWYQLTIEPNTMFYYKPP----ALPDDDQLWDIFEQGHQKLTQAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L      
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKIKHPKGYLA----- 296

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDW 346
            H  + K +L SEQ  +      EF M   RL E    +D+
Sbjct: 297 AHQNMVKPYLDSEQLVEEIDRPFEFFMNRFRLMEACPKQDF 337


>gi|27364890|ref|NP_760418.1| HemN family oxidoreductase [Vibrio vulnificus CMCP6]
 gi|27361035|gb|AAO09945.1| coproporphyrinogen III oxidase-related protein [Vibrio vulnificus
           CMCP6]
          Length = 389

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 194/341 (56%), Gaps = 21/341 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++    +  +    PR + S
Sbjct: 6   ALSLYVHIPWCVQKCPYCDFNSHALKEQIPEQMYINALLEDLDRDIEKYQLHRAPRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + I  +L GI K    + ++EIT+EANP ++E   F GYRKAGV RI
Sbjct: 66  IFIGGGTPSLISAEGIRDLLQGIEKRIPFTPSIEITMEANPGTIEAERFAGYRKAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L 
Sbjct: 126 SIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLD 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   YE
Sbjct: 186 KAIELNPPHLSWYQLTIEPNTMFYYKPP----ALPDDDQLWDIFERGHQKLTQAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L      
Sbjct: 242 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKIKHPKGYLA----- 296

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDW 346
            H  + K +L SEQ  +      EF M   RL E    +D+
Sbjct: 297 AHQNMVKPYLDSEQLVEEIDRPFEFFMNRFRLMEACPKQDF 337


>gi|108758188|ref|YP_629403.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Myxococcus xanthus DK 1622]
 gi|108462068|gb|ABF87253.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Myxococcus xanthus DK 1622]
          Length = 401

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 22/400 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           + +TG  +   G+Y+H+P+C+ KCPYCDF   V R +V +E + ++ L E+   R    P
Sbjct: 8   DALTGMPAARFGLYLHFPYCLAKCPYCDFAVAVAR-QVPEERYARAVLAELD-TRLAAEP 65

Query: 69  ----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               + + SIF GGGTPSL  P+ +A +LDGIA    V+  VE+++E NP   +   F G
Sbjct: 66  SLAGKVLDSIFLGGGTPSLWHPRYVAQVLDGIAARLRVAPGVEVSLEGNPERADAERFAG 125

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
           YR AGVNR+SLGVQS + ++L+ LGR H+A+    A+  AR+  FP ++ D IY +  QT
Sbjct: 126 YRAAGVNRLSLGVQSFQPETLKALGRAHDAAMVEGAVDAARSAAFPVVAMDFIYGVHGQT 185

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNL 238
           + Q E + +RA++ A +HLS Y LT+E+  L       K  K G+L LP ++  VD+  +
Sbjct: 186 VAQVEADARRAVALAPEHLSTYALTVERDVLAEDTPLSKRLKRGELELPPDDTVVDMARV 245

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
            + +  A GLH YE+SNH+  G  S HN  YW  G+Y+ +G GA   +        +++ 
Sbjct: 246 VREVYGAAGLHRYEVSNHARPGFSSRHNALYWTGGEYLALGVGATGMLLSPQPHRYVNL- 304

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIE 357
           +  E +L            +E L  E+   E L MGLRL  G+   DWE +  R    +E
Sbjct: 305 RSAERYLVEAEAGRLPEEGREPLGPEELFAERLAMGLRLVSGV---DWEAVCERYGQPVE 361

Query: 358 CER----NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             R     L   GF   ++  RL  T++G  +  +V A L
Sbjct: 362 PRRAEVARLVAHGFAT-LRDGRLALTEKGADVHSAVCARL 400


>gi|206561361|ref|YP_002232126.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia J2315]
 gi|198037403|emb|CAR53338.1| putative coproporphyrinogen III oxidase family protein
           [Burkholderia cenocepacia J2315]
          Length = 404

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 213/375 (56%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGAAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|124267888|ref|YP_001021892.1| putative anaerobic coproporphyrinogen III oxidase oxidoreductase
           protein [Methylibium petroleiphilum PM1]
 gi|124260663|gb|ABM95657.1| putative anaerobic coproporphyrinogen III oxidase oxidoreductase
           protein [Methylibium petroleiphilum PM1]
          Length = 417

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/393 (35%), Positives = 217/393 (55%), Gaps = 29/393 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-------VRRYKVG-----------QENFIQSFLTEMQ 60
           L +YVH P+C+KKCPYCDFNSH       +R  + G           +  ++ +   +++
Sbjct: 26  LALYVHLPWCLKKCPYCDFNSHELTTAPMLRPDRPGAGTGRALDAGVESRYLDALRADLE 85

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L   R + S+F GGGTPSL  P  I  +L  +     +    EIT+EANP + E  
Sbjct: 86  GALPLVWGRRVVSVFIGGGTPSLFSPDAIGQLLADVRARLPLEPGCEITLEANPGTFERE 145

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F+ +R AGV R+S+GVQS ++  L+ LGR H+ ++A+AA+  AR+ F   + DL+YALP
Sbjct: 146 RFRAFRAAGVTRLSIGVQSFDDAKLKALGRVHDRAQALAAVEEARSAFDTFNLDLMYALP 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++   E ++++AL++   HLS+Y LT+E  T F      G   LP ++ A  + +   
Sbjct: 206 GQSLADCEADVRQALTFEPPHLSVYHLTLEPNTQFASRPPAG---LPDDDTAFGMLDRIT 262

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-K 299
            +T+A GL  YE+S ++  G    HNLNYW++GDY+GIG GAHS++   +HRV      +
Sbjct: 263 ELTTAAGLGRYEVSAYARPGHRCQHNLNYWQFGDYLGIGAGAHSKLSF-AHRVLRQTRWR 321

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            P ++L+     G AV  +  ++ ++   EF++  LRLREG  +  +    G  +    +
Sbjct: 322 EPAAYLRQA-VEGAAVSNEHEVARQELPFEFMLNALRLREGFELARFAERTGLAV-TAIQ 379

Query: 360 RNL---QRQGFIERVQFSRLRCTQRGMTMLDSV 389
           R L   + +G IER    R+  T+RG   L  +
Sbjct: 380 RGLEAAEAKGLIER-DLQRVWPTERGFDFLSDL 411


>gi|78065575|ref|YP_368344.1| coproporphyrinogen III oxidase [Burkholderia sp. 383]
 gi|77966320|gb|ABB07700.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia sp. 383]
          Length = 404

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/376 (35%), Positives = 214/376 (56%), Gaps = 11/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + +IF 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTIFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNETHLKALGRIHDTTQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDVETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGHYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           E+  + +     EF++  LRL EG  V ++    G  +    E  LQ   R+G I R  F
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPMST-IEPALQEAERRGLIAR-DF 380

Query: 374 SRLRCTQRGMTMLDSV 389
           +++  T  G   L+ +
Sbjct: 381 AQIAPTPLGQRFLNDL 396


>gi|299066244|emb|CBJ37428.1| Coproporphyrinogen dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 424

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/383 (37%), Positives = 223/383 (58%), Gaps = 12/383 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + ++ F+ +   +++    +   R + +
Sbjct: 40  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPDQGIPEDRFLAAIRQDLEAALPMVWGRRVHT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  + +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 100 IFIGGGTPSLLSARGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 160 SIGIQSFNDAHLQALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 220 ALSFGTSHVSLYHLTLEPNTYFAKHPP----ALPDDDTAFAMQDWIHARLAAAGYEHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  KHPE++L+     G
Sbjct: 276 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVIREMRHKHPETYLRQSETAG 334

Query: 313 HAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERN-LQRQGFI 368
            A V  E+  + +     EF++  LRL EG  V  ++   G  L  IE E +  +R+G +
Sbjct: 335 GATVVQEQREVDAADLPFEFMLNTLRLTEGFPVTLFQERTGLPLRGIERELDAAERRGLL 394

Query: 369 ERVQFSRLRCTQRGMTMLDSVIA 391
            R   + +R T+ G   L+ + A
Sbjct: 395 VRDHVA-IRPTELGQRFLNDLQA 416


>gi|332264560|ref|XP_003281303.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial [Nomascus leucogenys]
          Length = 442

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/382 (36%), Positives = 220/382 (57%), Gaps = 19/382 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH P+C K+C YC+FN ++ R+ V +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHGPYCEKRCSYCNFNKYIPRH-VEEAAMQKCLVTEAQTLLRLSGVQWVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL
Sbjct: 101 PSLASPHTLAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSL 160

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  
Sbjct: 161 DDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVELWLGQLQELLHHCD 220

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLSLYQL++E+GT  +   + G L  P   +  ++Y   ++I    G H YE+SN +  
Sbjct: 221 DHLSLYQLSLERGTALFTQVQRGALPAPDPELTAEMYQRGRAILREAGFHQYEVSNFARN 280

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAV 315
           GA S  N  YW+ G Y+GIGPGAH R      G H     I+   P++W+K V   GH  
Sbjct: 281 GALSTPNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGT 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---------LAGRNLDIECERNLQRQG 366
            ++  L   +  +E L +GLR   GI+ + W+          + G N +++    L  +G
Sbjct: 341 RKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDMFGANKEVQ---ELLERG 397

Query: 367 FIERVQFSRLRCTQRGMTMLDS 388
            ++ +    LRC+  G+ +LDS
Sbjct: 398 LLQ-LDHRGLRCSWEGLAVLDS 418


>gi|117923370|ref|YP_863987.1| coproporphyrinogen III oxidase anaerobic [Magnetococcus sp. MC-1]
 gi|117607126|gb|ABK42581.1| coproporphyrinogen III oxidase, anaerobic [Magnetococcus sp. MC-1]
          Length = 390

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/382 (36%), Positives = 212/382 (55%), Gaps = 9/382 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLT-GPRSISSIFF 76
           L +Y+H P+CV KCPYCDF+S V   +V QE ++ + L E+  W R+ +   R + SIF 
Sbjct: 6   LSLYLHIPYCVHKCPYCDFHSRVE-VQVPQERYVDALLMELGMWRRRFSQDARPLQSIFL 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL +P  I  ++ GI   W + S  E+T+E NP S+      GY +AG+ R+S+G
Sbjct: 65  GGGTPSLFDPPQIGRLMAGIGAIWPLESGCEVTMEGNPESLTQGRLAGYGEAGITRMSVG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+L+E  LR L R H+ ++A+  +  LA+  F   S D I+A P  T+  W  EL   L
Sbjct: 125 VQALDEGRLRQLQRPHDRAQALQGLGWLAQAGFSSWSADFIFATPGHTVAGWLEELAEVL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLS Y LT+E GT F++  + G+ ++  E   + L   T    +A GL +YEISN
Sbjct: 185 AFAPPHLSCYGLTVEPGTPFFQRQQGGEALVADEERQLALLEATYERLTAAGLPSYEISN 244

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
            +  G    HN+NYWR+GDY+G+G  AH +       V  S        ++  V      
Sbjct: 245 FARAGHGCRHNVNYWRFGDYLGVGVAAHGKWSDADGVVWRSANLADAARYMACVEAGRSP 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERV 371
            V  + L+ ++  +E L+MGLR+ EG+S   ++ + G +L       L   +RQG + + 
Sbjct: 305 WVRDQRLTPQEAGNEALVMGLRMGEGMSKATYQWVRGVSLQQSVGDGLAWFERQGMLAQ- 363

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
             + +  T RG+ + D V+A L
Sbjct: 364 SATHVWLTPRGLRLADGVMAEL 385


>gi|121593341|ref|YP_985237.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax sp. JS42]
 gi|222110070|ref|YP_002552334.1| oxygen-independent coproporphyrinogen iii oxidase [Acidovorax
           ebreus TPSY]
 gi|120605421|gb|ABM41161.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax sp. JS42]
 gi|221729514|gb|ACM32334.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           ebreus TPSY]
          Length = 414

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 214/379 (56%), Gaps = 16/379 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYK------VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           YVH P+C++KCPYCDFNSH  R        V +  +I + L +++    L   R++ SIF
Sbjct: 38  YVHLPWCLRKCPYCDFNSHEARGGMGGDGGVPEARYIDALLADLEAALPLIWGRTVHSIF 97

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++I  +L  I     + +  EIT+EANP + E   F+ YR AGV R+S+
Sbjct: 98  IGGGTPSLFAPESIDRLLGDIRARLRLDAGCEITLEANPGTFEKERFRAYRGAGVTRLSI 157

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  ++ L+ LGR HN ++A+AA+  A   F   + D++YALP QT  + + +++ AL
Sbjct: 158 GVQSFNDRHLQALGRVHNRAQALAAVEEAAQAFDTFNLDIMYALPGQTPAELDEDMRTAL 217

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    H+S+Y LTIE  T F K        LP ++ A  + +    +T A GL  YE+S 
Sbjct: 218 ALQPPHISIYHLTIEPNTYFAKYPPP----LPEDDAAYAMLDRITELTGAAGLARYEVSA 273

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           ++  G + +HN NYW++GDY+GIG GAHS++   +HRV   +  + P+ ++      G A
Sbjct: 274 YAREGHQCVHNRNYWQFGDYLGIGAGAHSKLSF-AHRVVRQVRLRDPQLYMAGALA-GRA 331

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
           + + + +       EF++  LRL+EG +++D+    G  +       +  + QG I R  
Sbjct: 332 IAQDDDVRRADLPFEFMLNALRLQEGFALQDFTARTGLAITAIAAGLQQAEAQGLITR-D 390

Query: 373 FSRLRCTQRGMTMLDSVIA 391
             R+R TQRG   L  + A
Sbjct: 391 MERVRPTQRGFDFLSDLQA 409


>gi|330812372|ref|YP_004356834.1| coproporphyrinogen dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380480|gb|AEA71830.1| putative coproporphyrinogen dehydrogenase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 399

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 210/373 (56%), Gaps = 12/373 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++         R +SSIFFGGGTP
Sbjct: 30  YVHIPWCVRKCPYCDFNSHTASPQLPEEEYVDALLADLDQDLHAVHGRPLSSIFFGGGTP 89

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SL   Q +  +L G+      + ++EIT+EANP + E   F  YR  G+NR+S+G+QS +
Sbjct: 90  SLFSAQALGRLLKGVEARIPFAQDIEITLEANPGTFEQEKFVAYRALGINRLSIGIQSFQ 149

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A++    
Sbjct: 150 QAKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLEDALSDLRQAIALKPT 209

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS YQLT+E  T+F+         LP ++   D+    Q++ + HG   YE+S ++  G
Sbjct: 210 HLSWYQLTLEPNTVFWNQPP----TLPEDDTLWDIQEAGQALLAEHGYAQYEVSAYAQPG 265

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKE 319
             + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +        ++
Sbjct: 266 RAARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYLNPAKS---FQAGEK 322

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLR 377
            L++E+   EFLM  LRL  G+  + +    G  L    E  R  ++ G ++ V+ +RL 
Sbjct: 323 TLANEELPFEFLMNALRLTAGVEARLYPERTGLPLQSLAEGRREAEQSGLLQ-VEPTRLA 381

Query: 378 CTQRGMTMLDSVI 390
            T+RG   L+ ++
Sbjct: 382 ATERGQLFLNDLL 394


>gi|53802786|ref|YP_115466.1| oxygen-independent coproporphyrinogen III oxidase [Methylococcus
           capsulatus str. Bath]
 gi|53756547|gb|AAU90838.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Methylococcus capsulatus str. Bath]
          Length = 380

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/378 (37%), Positives = 215/378 (56%), Gaps = 17/378 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH P+CV+KCPYCDFNSH     + + ++I + L ++         R + S+F GG
Sbjct: 7   LGLYVHVPWCVRKCPYCDFNSHRLEGGLPERDYIAALLNDLARDADRVTGRCVESVFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ + L+L+G+     ++S+ EIT+EANP + E   F+G+R+AGVNR+S+GVQ
Sbjct: 67  GTPSLLSPEAVDLLLEGVRSRIALASDAEITLEANPGTAETAKFKGFREAGVNRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S ++  L  LGR H+   A+ A  +AR   F   + DL++ LP QT+ Q + +++ A++ 
Sbjct: 127 SFDDAKLTALGRIHDGRAAVEAAAMAREAGFTNFNLDLMFGLPGQTIAQAKRDVETAIAQ 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLT+E  TLF++        LP  +   D+    Q++ +  G   YEIS ++
Sbjct: 187 RPTHVSYYQLTLEPNTLFHRSPP----ALPEADAVWDIQRAGQALLADAGYGHYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVA-ISIEKHPESWLKMVRKNGHAV 315
             G    HN+NYWR+GDY+G+G GAH +V    S R+  +   +HP  +L+     G  V
Sbjct: 243 RDGFRCRHNVNYWRFGDYLGVGAGAHGKVTDPASGRITRLWKTRHPARYLETQGLGGEHV 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
           V+   L       EFLM  LRLREG  +  +    G     L+      LQ +G +ER  
Sbjct: 303 VDDASLPF-----EFLMNQLRLREGFELASFTERTGLTACALEPALSECLQ-EGHLER-H 355

Query: 373 FSRLRCTQRGMTMLDSVI 390
              +RC+ RG   LD V+
Sbjct: 356 GGVIRCSDRGWNFLDEVL 373


>gi|261377934|ref|ZP_05982507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria cinerea ATCC 14685]
 gi|269145794|gb|EEZ72212.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria cinerea ATCC 14685]
          Length = 391

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 202/377 (53%), Gaps = 10/377 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+++AG+ R+S+G 
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKEAGITRLSIGA 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS     L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNNDMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHVSAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQF 373
           ++ +++E    EF+M  LRL +G+      ML  R       I  +    RQ  +     
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAA---MLHERTGVPAAKIMAQIETARQKGLLETDP 370

Query: 374 SRLRCTQRGMTMLDSVI 390
           +  R T++G   L+ ++
Sbjct: 371 TVFRPTEQGQLFLNDLL 387


>gi|86146419|ref|ZP_01064743.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|85835898|gb|EAQ54032.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
          Length = 395

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/386 (37%), Positives = 215/386 (55%), Gaps = 22/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L    T+++  +    PR + S
Sbjct: 10  ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEKEYIDALLEDLDTDIEKYQLNDAPRPLHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAGV+RI
Sbjct: 70  IFIGGGTPSLFSPEGIGRLLQGIKQRIPFKPEIEITMEANPGTIEAERFAGYQKAGVSRI 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +L 
Sbjct: 130 SVGVQSFEQEKLERLGRIHGQDEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALADLD 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +A+     HLS YQLTIE  T+F YK  K     LP ++   D+++L     +  G   Y
Sbjct: 190 KAIELDPPHLSWYQLTIEPNTMFYYKTPK-----LPDDDDLWDIFDLGHKKLADAGYVQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK 310
           EIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   + 
Sbjct: 245 EISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQN 304

Query: 311 NGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----IECERNLQR 364
                +  E  + +E +  EF M   RL E    +D+    G   D     IE  + L  
Sbjct: 305 LVKPYLSDELEVPNEDRPFEFFMNRFRLMEACPKQDFIDTTGLGFDSIQETIEWAKEL-- 362

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVI 390
            G++     S  + T++G   L+ ++
Sbjct: 363 -GYLNETN-SHWQITEKGKLFLNDLL 386


>gi|332529687|ref|ZP_08405641.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hylemonella gracilis ATCC 19624]
 gi|332040708|gb|EGI77080.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hylemonella gracilis ATCC 19624]
          Length = 397

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/381 (37%), Positives = 221/381 (58%), Gaps = 14/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH P+C+KKCPYCDFNSH +   +V ++ ++ + + +++    L   R + SIF 
Sbjct: 20  PLSLYVHLPWCLKKCPYCDFNSHELNPREVPEQRYLDALIADLEASLPLIWGRPVQSIFI 79

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P  I  +L  I     ++++ EIT+EANP + E + F  +R AGV R+S+G
Sbjct: 80  GGGTPSLFSPTGINRLLSDIRARLRLAADCEITLEANPGTFEKDRFAAFRAAGVTRLSVG 139

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS  +  L+ LGR H+ ++A+AA+  A   F   + DL+YALP Q++TQ + +L  ALS
Sbjct: 140 VQSFNDAHLKALGRVHDRAQALAALEEAARSFETWNLDLMYALPGQSLTQLDADLDAALS 199

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLS+Y LTIE  T F K         P E+ A  + +     T A GL  YE+S +
Sbjct: 200 FAPPHLSVYHLTIEPNTYFAKFPPQ----TPDEDTAYAMLDRITERTGASGLGRYEVSAY 255

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK--MVRKNGH 313
           +  G    HNLNYW++GDY+GIG GAH ++   +HRV   +  + P  +++  +    G 
Sbjct: 256 AQPGHGCRHNLNYWQFGDYLGIGAGAHGKLSF-AHRVIRQVRAREPRLYMERALSADPGS 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
           AVV+ E +S      EF++  LRLREG +++D+    G  L    ++ L   +R+G++ R
Sbjct: 315 AVVQDEEVSRADLPFEFMLNALRLREGFALQDFADRTGLAL-TAIQKPLEEAERKGWLTR 373

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
              +R   T++G   L  + A
Sbjct: 374 -DLNRAWPTEQGFDFLSDLQA 393


>gi|290476324|ref|YP_003469228.1| putative oxidase [Xenorhabdus bovienii SS-2004]
 gi|289175661|emb|CBJ82464.1| putative oxidase [Xenorhabdus bovienii SS-2004]
          Length = 376

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/335 (38%), Positives = 195/335 (58%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L +++    +   R +S+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLRADLPMIEDREVSTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+  +  +SS  EIT+EANP +VE   F  Y+KAGVNRIS+GVQ
Sbjct: 67  GTPSLLSAEGMQRLLDGVRASLPLSSQAEITMEANPGTVEAGRFSAYQKAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EA  A HLA ++  R  + DL++ LP QT+ +   +L++A+  
Sbjct: 127 SFGSDKLIRLGRIHGPDEAKRAAHLAADLGLRSFNLDLMHGLPNQTLNEALDDLRQAIEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F         VLP ++   D+++    + +A G   YE S ++
Sbjct: 187 SPPHLSWYQLTIEPNTSFGSRPP----VLPDDDALWDIFSQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  + 
Sbjct: 243 KAGYQCQHNLNYWRFGDYLGIGCGAHGKISFEDGRILRTVKTKHPRGYMQ-----GRYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           ++  L +E +  EF M   RL E +   D+    G
Sbjct: 298 QQNQLDNEDRPFEFFMNRFRLLEAMPRHDFSDFTG 332


>gi|227112388|ref|ZP_03826044.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 380

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 126/336 (37%), Positives = 195/336 (58%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPDEAKRAAHLANGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  ++++++  EF M   RL E     D+    G
Sbjct: 297 DKQHDVANDERPFEFFMNRFRLLEAAPRADFTAYTG 332


>gi|285017588|ref|YP_003375299.1| coproporphyrinogen III oxidase [Xanthomonas albilineans GPE PC73]
 gi|283472806|emb|CBA15311.1| putative coproporphyrinogen III oxidase protein [Xanthomonas
           albilineans]
          Length = 381

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 202/337 (59%), Gaps = 7/337 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + + ++     L   R + S+FFG
Sbjct: 4   PLSLYVHLPWCVRKCPYCDFNSHAAKGALPFDAYVDALIRDLDQDLPLVWGRVVHSVFFG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ IA  L+  +     +  +EIT+E NP + E   F  Y  AGVNR+S G+
Sbjct: 64  GGTPSLFPPEAIARFLEAASARLRFAPGLEITLETNPGTAEHGRFDRYLAAGVNRLSFGI 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++ +L+ LGR H+++EA  A+ LA++  F  ++ DL+YALP+QT+ + E ++ RA++
Sbjct: 124 QSFDDAALQRLGRIHDSAEAERAVKLAQDAGFTNLNLDLMYALPQQTLAEAERDVTRAMA 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  TLF      G   +P ++ A ++    Q++ +A G   YE+S +
Sbjct: 184 LQPTHISHYQLTLEPNTLFAARPPQG---IPEDDDAWNMQEHCQALLAAAGYAQYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS--IEKHPESWLKMVRKNGHA 314
           +  G   +HNLNYW +GDY+GIG GAH ++  G+ +  +     KHP++++        A
Sbjct: 241 AREGERCVHNLNYWTFGDYLGIGAGAHGKISSGAEQRILRRWKHKHPQAFMAAAGTPA-A 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   +++  +Q+  E+++  LRL  G +++D+    G
Sbjct: 300 IGGDDWIEPKQRPFEYMLNALRLNHGFALRDFTARTG 336


>gi|152979528|ref|YP_001345157.1| coproporphyrinogen III oxidase [Actinobacillus succinogenes 130Z]
 gi|150841251|gb|ABR75222.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinobacillus succinogenes 130Z]
          Length = 391

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 132/351 (37%), Positives = 203/351 (57%), Gaps = 20/351 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQL 65
           MT      L +YVH P+CV+KCPYCDFNSH ++ ++ + ++++  LT+++     +   +
Sbjct: 4   MTELTLPPLSLYVHIPWCVQKCPYCDFNSHGQKGEIPERDYVRHLLTDLRQDLTRYAASV 63

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G R++ SIF GGGTPSL   +NI  +L GI      + N+EIT+EANP + E   F+GY
Sbjct: 64  NG-RALQSIFIGGGTPSLFSAENIGELLHGIRAQIAFADNIEITLEANPGTAEAERFRGY 122

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPK 181
             AGVNRIS+G+QS  ++ L+ LGR HN++EA +A+  A+++  R     + DL++ LP 
Sbjct: 123 VNAGVNRISMGIQSFSDEKLKILGRIHNSAEAKSAVGFAQDLLGRGLKSFNLDLMHGLPN 182

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+ Q   +L+RA+     HLS YQLTIE  TLF          LP +++  D++     
Sbjct: 183 QTVQQALDDLRRAIVLNPPHLSWYQLTIEPNTLFAYRPP----ALPDDDLLWDIFEQGHQ 238

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKH 300
           + +A G   YE S ++  G +  HNLNYWR+GDY+ IG GAH ++     R+   S  KH
Sbjct: 239 LLTAAGYQQYETSAYAKPGFQCRHNLNYWRFGDYLAIGCGAHGKLGFTDGRIVRYSKTKH 298

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           P+ +L+     G  +  ++ +    +A EF M   RL E +   + +   G
Sbjct: 299 PKGYLR-----GEYLFNEKNVPESDRAFEFFMNRFRLLEPVPKAELKQFTG 344


>gi|91784890|ref|YP_560096.1| coproporphyrinogen III oxidase [Burkholderia xenovorans LB400]
 gi|91688844|gb|ABE32044.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia xenovorans LB400]
          Length = 409

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 122/327 (37%), Positives = 196/327 (59%), Gaps = 6/327 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     E  ++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGDTFPETEYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E + F  +R +GV+R+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEADKFAQFRASGVSRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A   F   + DL++ALP QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSAQARHAVEVASTTFDNFNLDLMFALPGQTLAECQADVEMALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G AV 
Sbjct: 268 ARPHRQSRHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPTTFIEQA-KAGTAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E+  + +     EF++  LRL EG  V
Sbjct: 327 EEHEVGTRDLPFEFMLNALRLVEGFPV 353


>gi|167563699|ref|ZP_02356615.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis EO147]
 gi|167570849|ref|ZP_02363723.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis C6786]
          Length = 405

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 123/341 (36%), Positives = 199/341 (58%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPEHDYLDALRADLEQALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS +E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFDESHLKALGRIHDAAQARAAVEIAARTFDNFNLDLMFALPNQTLDECRTDLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALSFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQAGYERYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYAKPHRQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGA 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           AV E+  +       EF++  LRL EG+    +    G +L
Sbjct: 321 AVQEEREVGPRDLPFEFMLNALRLVEGVPTHSFAERTGMSL 361


>gi|22127208|ref|NP_670631.1| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|45443234|ref|NP_994773.1| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806316|ref|YP_650232.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108813303|ref|YP_649070.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145597876|ref|YP_001161952.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|165924952|ref|ZP_02220784.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|167399879|ref|ZP_02305397.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422016|ref|ZP_02313769.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|21960275|gb|AAM86882.1|AE013934_5 putative oxidase [Yersinia pestis KIM 10]
 gi|45438102|gb|AAS63650.1| putative oxidase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776951|gb|ABG19470.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108778229|gb|ABG12287.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|145209572|gb|ABP38979.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|165923152|gb|EDR40303.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166960153|gb|EDR56174.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167050587|gb|EDR61995.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
          Length = 380

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 215/380 (56%), Gaps = 22/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GG
Sbjct: 11  LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHVLADLDADVPLVSGREISTIFIGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V+S+ EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 71  GTPSLLSAEAMQQLLDGVRARLPVASDAEITMEANPGAVEADRFSGYQRAGINRISIGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q L  LGR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++ 
Sbjct: 131 SFSAQKLTRLGRIHGPDEARRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIAL 190

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F         +LP ++   D++     + SA G   YE S ++
Sbjct: 191 NPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLLSAAGYLQYETSAYA 246

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNGH 313
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++   + ++   
Sbjct: 247 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFNDGRILRTIKTKHPRGFMQGKYLDKQYEV 306

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIER 370
           A V++ F        EF M   RL E     D+    G     +  + +  + ++  IE 
Sbjct: 307 AAVDRPF--------EFFMNRFRLLEAAPRADFYHFTGLTESTIRPQLDEAIAKEYLIET 358

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            ++ ++  T++G   L+S++
Sbjct: 359 TEYWQI--TEKGKLFLNSLL 376


>gi|186896652|ref|YP_001873764.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|186699678|gb|ACC90307.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis PB1/+]
          Length = 376

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 215/380 (56%), Gaps = 22/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHVLADLDADVPLVSGREISTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V+S+ EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQQLLDGVRARLPVASDTEITMEANPGAVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q L  LGR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++ 
Sbjct: 127 SFSAQKLTRLGRIHGPDEARRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F         +LP ++   D++     + SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLLSAAGYLQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNGH 313
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++   + ++   
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFNDGRILRTIKTKHPRGFMQGKYLDKQYEV 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIER 370
           A V++ F        EF M   RL E     D+    G     +  + +  + ++  IE 
Sbjct: 303 AAVDRPF--------EFFMNRFRLLEAAPRADFYHFTGLTESTIRPQLDEAIAKEYLIET 354

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            ++ ++  T++G   L+S++
Sbjct: 355 TEYWQI--TEKGKLFLNSLL 372


>gi|51597528|ref|YP_071719.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|149367045|ref|ZP_01889078.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis CA88-4125]
 gi|153949486|ref|YP_001399809.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|162420837|ref|YP_001604773.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|165937288|ref|ZP_02225852.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010233|ref|ZP_02231131.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212704|ref|ZP_02238739.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167426718|ref|ZP_02318471.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468165|ref|ZP_02332869.1| coproporphyrinogen III oxidase [Yersinia pestis FV-1]
 gi|170023075|ref|YP_001719580.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|218928118|ref|YP_002345993.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229837639|ref|ZP_04457801.1| predicted oxidoreductase [Yersinia pestis Pestoides A]
 gi|229840865|ref|ZP_04461024.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842574|ref|ZP_04462729.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903766|ref|ZP_04518879.1| predicted oxidoreductase [Yersinia pestis Nepal516]
 gi|270487544|ref|ZP_06204618.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis KIM D27]
 gi|294502891|ref|YP_003566953.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|51590810|emb|CAH22456.1| Putative conserved coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|115346729|emb|CAL19612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis CO92]
 gi|149290659|gb|EDM40735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis CA88-4125]
 gi|152960981|gb|ABS48442.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pseudotuberculosis IP 31758]
 gi|162353652|gb|ABX87600.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis Angola]
 gi|165914762|gb|EDR33375.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165990719|gb|EDR43020.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205996|gb|EDR50476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167054321|gb|EDR64140.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169749609|gb|ACA67127.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis YPIII]
 gi|229679536|gb|EEO75639.1| predicted oxidoreductase [Yersinia pestis Nepal516]
 gi|229690884|gb|EEO82938.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697231|gb|EEO87278.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704327|gb|EEO91338.1| predicted oxidoreductase [Yersinia pestis Pestoides A]
 gi|262360926|gb|ACY57647.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|270336048|gb|EFA46825.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis KIM D27]
 gi|294353350|gb|ADE63691.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|320013972|gb|ADV97543.1| putative oxidoreductase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 376

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 215/380 (56%), Gaps = 22/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHVLADLDADVPLVSGREISTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V+S+ EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQQLLDGVRARLPVASDAEITMEANPGAVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q L  LGR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++ 
Sbjct: 127 SFSAQKLTRLGRIHGPDEARRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F         +LP ++   D++     + SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLLSAAGYLQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNGH 313
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++   + ++   
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFNDGRILRTIKTKHPRGFMQGKYLDKQYEV 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIER 370
           A V++ F        EF M   RL E     D+    G     +  + +  + ++  IE 
Sbjct: 303 AAVDRPF--------EFFMNRFRLLEAAPRADFYHFTGLTESTIRPQLDEAIAKEYLIET 354

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            ++ ++  T++G   L+S++
Sbjct: 355 TEYWQI--TEKGKLFLNSLL 372


>gi|315634900|ref|ZP_07890182.1| coproporphyrinogen dehydrogenase [Aggregatibacter segnis ATCC
           33393]
 gi|315476452|gb|EFU67202.1| coproporphyrinogen dehydrogenase [Aggregatibacter segnis ATCC
           33393]
          Length = 389

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 131/341 (38%), Positives = 205/341 (60%), Gaps = 17/341 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSIFF 76
           +Y+H P+CV+KCPYCDFNSH ++  + ++ +++  L ++       ++    RS+ SIF 
Sbjct: 16  LYIHIPWCVQKCPYCDFNSHAQKGSIPEQEYVRHLLADLTADLSRYQESVQQRSLHSIFI 75

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   +NIA +L  I +    + ++EIT+EANP + E   F GY +AGVNRIS+G
Sbjct: 76  GGGTPSLFSAENIAFLLHQIEQRIPFAPHIEITLEANPGTAEAERFLGYVQAGVNRISMG 135

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           +QS  ++ L+ LGR HNA+EA +A+  AR    R+ + DL++ LP QT+ +   +L++A+
Sbjct: 136 IQSFSDEKLQKLGRIHNAAEAKSAVGFARVSSLRIFNLDLMHGLPNQTLNEALDDLRQAI 195

Query: 196 SYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A  HLS YQLTIE  T+F Y+  K     LP ++   D++     + +A G   YE S
Sbjct: 196 ELAPPHLSWYQLTIEPNTMFAYRPPK-----LPDDDELWDIFEQGHQLLTAAGYQQYETS 250

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNGH 313
            ++  G +  HNLNYWR+GDY+ IG GAH ++   S ++   S  KHP+ +++     G 
Sbjct: 251 AYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLSFPSGKILRYSKTKHPKGYMR-----GE 305

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            + E+  +S+E +  EF M   RL E +   ++E   G +L
Sbjct: 306 YLYEERDVSAEDRPFEFFMNRFRLLEAVPKSEFEQFTGLSL 346


>gi|134295023|ref|YP_001118758.1| coproporphyrinogen III oxidase [Burkholderia vietnamiensis G4]
 gi|134138180|gb|ABO53923.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia vietnamiensis G4]
          Length = 404

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 212/375 (56%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAQTFDNFNLDLMFALPNQTLAECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K       V+P ++ + D+       T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERN-LQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +  IE   N  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMGTIEPALNEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|187925063|ref|YP_001896705.1| coproporphyrinogen III oxidase [Burkholderia phytofirmans PsJN]
 gi|187716257|gb|ACD17481.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phytofirmans PsJN]
          Length = 409

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 194/327 (59%), Gaps = 6/327 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     EN ++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGDTFPENEYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A   F   + DL++ALP QT+ Q + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSAQARHAVEVAATTFDNFNLDLMFALPGQTLAQCQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP  + + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDADSSADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G AV 
Sbjct: 268 ARPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPTTFIERALA-GTAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E+  + +     EF++  LRL EG  V
Sbjct: 327 EEREVGTRDLPFEFMLNALRLVEGFPV 353


>gi|253689817|ref|YP_003019007.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756395|gb|ACT14471.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 380

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 198/345 (57%), Gaps = 13/345 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + E+T+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEVTMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            ++  ++++ +  EF M   RL E     D+    G  L+  C R
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPRADFTAYTG--LEEHCIR 339


>gi|240949314|ref|ZP_04753657.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
 gi|240296265|gb|EER46914.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
          Length = 385

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 210/389 (53%), Gaps = 23/389 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L ++       +   G R I SI
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEKAYIQHLLADLSQDLTAYKTAIGERKIHSI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + I  +L  I K       +EIT+EANP + E   F GY + GVNRIS
Sbjct: 68  FIGGGTPSLFSAEGIQYLLAEIQKRIAFEDQIEITLEANPGTAEAERFLGYVQGGVNRIS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEME 190
           +G+QS E + L  LGR HN  EAI A+  A+N         + DL++ LP Q+++Q   +
Sbjct: 128 MGIQSFEPEKLLKLGRIHNREEAIQAVEFAKNAASLGLRSFNLDLMHGLPNQSVSQALSD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A++    HLS YQLTIE  T+FY         LP ++   D++     + ++ G   
Sbjct: 188 LKQAIALNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTSAGYEQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 244 YETSAYAKKGYQCQHNLNYWRFGDYLAIGCGAHGKITYPTGEIYRFSKTKHPKGYMQ--- 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQG 366
             G     +E ++ E +  EF M   RL E     D+E L G   ++++    + L++  
Sbjct: 301 --GEYRYSQELIALEDRPFEFFMNRFRLLEATPKTDFEQLTGLTLKSIEPIITQALEKNY 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            IE  Q    + TQ G   L+ ++    V
Sbjct: 359 IIETEQ--HWQITQHGKLFLNELLEGFLV 385


>gi|325981769|ref|YP_004294171.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosomonas sp.
           AL212]
 gi|325531288|gb|ADZ26009.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosomonas sp.
           AL212]
          Length = 404

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 189/336 (56%), Gaps = 7/336 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +YVH+P+C+KKCPYCDFNSH  R    +V +E ++ + + +++   Q    R ++S+F
Sbjct: 15  LSLYVHFPWCLKKCPYCDFNSHELRTDESRVPEEEYVATLIRDLESALQDVWGRRLNSVF 74

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL     +  +L  +     +    E+T+EANP + E   F  +RKAG+NR+S+
Sbjct: 75  LGGGTPSLFSAGAMDAVLTAVRTLLPLEHFAEVTLEANPGTFEAQKFADFRKAGINRLSI 134

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   Q L+ LGR H+  EA  A+ +A   F  ++ DL+YALP QT+   + +++ A 
Sbjct: 135 GIQSFNPQHLKALGRVHDDQEAHRAVDIALKYFDNINLDLMYALPGQTLEHAQADIEAAC 194

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  V H+S Y LT+E  TLFY+        LP +  A  + ++ +  TS H    YE S 
Sbjct: 195 ACGVTHISAYHLTLEPNTLFYRFPPK----LPDDEAAAAMQDMIEQTTSDHQYRNYETSA 250

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN+NYW +GDY+GIG GAHS++      V     K P+ +L   R  G  +
Sbjct: 251 FARAGKESRHNVNYWLFGDYVGIGAGAHSKISFADKIVRQMRYKQPKEYLAKARMGGSLI 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             ++ L+   ++ EF+M  LRL  G     ++   G
Sbjct: 311 QVQQELTVADRSFEFMMNALRLTGGFDTPLFQERTG 346


>gi|17546880|ref|NP_520282.1| coproporphyrinogen III oxidase [Ralstonia solanacearum GMI1000]
 gi|17429180|emb|CAD15868.1| putative cog0635, coproporphyrinogen III oxidase and related fe-s
           oxidoreductases oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 424

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 142/383 (37%), Positives = 221/383 (57%), Gaps = 12/383 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH      + ++ F+ +   +++    +   R + +
Sbjct: 40  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEAGIPEDRFLAAIRQDLEAALPMVWGRRVHT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  + +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 100 IFIGGGTPSLLSARGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 160 SIGIQSFNDTHLQALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 220 ALSFGTSHVSLYHLTLEPNTYFAKHPP----ALPDDDTAFAMQDWIHARLAAAGYEHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  KHPE++L+     G
Sbjct: 276 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVIRDMRHKHPETYLRQAETAG 334

Query: 313 HAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERN-LQRQGFI 368
            A V  E+  + +     EF++  LRL +G  V  ++   G  L  IE E +  +R+G +
Sbjct: 335 GATVVQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLRGIERELDAAERRGLL 394

Query: 369 ERVQFSRLRCTQRGMTMLDSVIA 391
                + +R T+ G   L+ + A
Sbjct: 395 VH-DHATIRPTELGQRFLNDLQA 416


>gi|84394059|ref|ZP_00992795.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
 gi|84375301|gb|EAP92212.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
          Length = 395

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/386 (37%), Positives = 214/386 (55%), Gaps = 22/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++       QL G PR + S
Sbjct: 10  ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEKEYIDALLEDLDTDIEKYQLNGMPRPLHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAG+ RI
Sbjct: 70  IFIGGGTPSLFSPEGIGRLLQGIEQRIPFKPEIEITMEANPGTIEAERFAGYQKAGITRI 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +L 
Sbjct: 130 SVGVQSFEQEKLERLGRIHGQVEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALADLD 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +A+     HLS YQLTIE  T+F YK  K     LP ++   D+++L     +  G   Y
Sbjct: 190 KAIELDPPHLSWYQLTIEPNTMFYYKTPK-----LPDDDDLWDIFDLGHKKLADAGYVQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK 310
           EIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   + 
Sbjct: 245 EISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQN 304

Query: 311 NGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----IECERNLQR 364
                +  E  + +E +  EF M   RL E    +D+    G   D     IE  + L  
Sbjct: 305 LVKPYLSDELEVPNEDRPFEFFMNRFRLMEACPKQDFIDTTGLGFDSIQETIEWAKEL-- 362

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVI 390
            G++     +  + T++G   L+ ++
Sbjct: 363 -GYLNETD-THWQITEKGKLFLNDLL 386


>gi|117619818|ref|YP_855387.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561225|gb|ABK38173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 381

 Score =  245 bits (626), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 198/341 (58%), Gaps = 10/341 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++    ++ + L +++        R +SSIF G
Sbjct: 6   PLSLYIHVPWCVQKCPYCDFNSHAQKGELPHLEYVAALLEDLEQDLHWAQGRPLSSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++++ EIT+EANP +VE + F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLSVEAMQALLDGVRARIELTADCEITMEANPGTVEADKFAGFQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H  +EA  A  LA  I  P  + DL++ LP Q++     +LQ+A+ 
Sbjct: 126 QSFQQEKLTRLGRIHGPAEARKAAELAHAIKLPTFNLDLMHGLPDQSLADALSDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F          LP ++   D+Y    ++ +AHG   YEIS +
Sbjct: 186 CAPPHLSWYQLTIEPNTAFASKPP----TLPEDDTLWDIYEQGHAMLTAHGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH +V        +  +  KHP+ +L   R     
Sbjct: 242 AKAGYQCRHNLNYWRFGDYLGIGCGAHGKVTDLANPQILRTAKVKHPKGYLDPSRPY--- 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           + E+  ++++    E+ M   RL E     ++E   G  L+
Sbjct: 299 LDEQWQVTADDLPLEYFMNRFRLFEPAPKAEFEAYTGLGLE 339


>gi|54310246|ref|YP_131266.1| coproporphyrinogen III oxidase [Photobacterium profundum SS9]
 gi|46914687|emb|CAG21464.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Photobacterium profundum SS9]
          Length = 384

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/358 (39%), Positives = 198/358 (55%), Gaps = 26/358 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQL-TGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + L ++       QL  G R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHALKAEIPELDYIDALLEDLDIDLAKYQLEAGVRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P  I  +L GI      S ++EIT+EANP +VE   F  Y++ G+NRI
Sbjct: 66  IFIGGGTPSLISPPEIGRLLKGIETRIPFSHDIEITMEANPGTVEAGRFVAYQEVGINRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +++ L  LGR H + EA  A  LA +      + DL++ LP Q++     +L+
Sbjct: 126 SIGVQSFQDEKLTRLGRIHGSDEARKAAKLATDAGLNSFNIDLMHGLPDQSIDDAMYDLK 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S    HLS YQLTIE  T+FY         LP ++   D++     I +A G   YE
Sbjct: 186 QAISLNPPHLSWYQLTIEPNTMFYSKPP----TLPDDDDLWDIFEQGHQILAAAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH +V      +  +++ KHP  +L      
Sbjct: 242 ISGYSKPGLQCRHNLNYWRFGDYLGIGCGAHGKVSFADGNITRTVKVKHPRGYLNPA--- 298

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
                 K +L  E Q D      EF M   RL E    +D+    G +LD   + N+Q
Sbjct: 299 ------KPYLDKETQVDAAERPFEFFMNRFRLLEACPKQDYCDRTGLSLDT-IDTNIQ 349


>gi|145638622|ref|ZP_01794231.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittII]
 gi|145272217|gb|EDK12125.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittII]
 gi|309750121|gb|ADO80105.1| Putative oxidase [Haemophilus influenzae R2866]
          Length = 383

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 128/340 (37%), Positives = 201/340 (59%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHTQKGDIPEQDYIYHLLQDLQADLQRFKDAIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +A G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +S   +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|330446893|ref|ZP_08310544.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491084|dbj|GAA05041.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 387

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/348 (37%), Positives = 195/348 (56%), Gaps = 23/348 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + +    T++   + + G R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHALKTELPELDYIDALIDDLETDLSAYQLVNGVRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P  I  +L  I +    S ++EIT+EANP +VE   F  YR+AGVNRI
Sbjct: 66  IFIGGGTPSLISPSEIGRLLKAIEQRIPFSDDIEITMEANPGTVEAGRFDAYRQAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS + + L  LGR H   EAI A  LA+       + DL++ LP Q++     +L+
Sbjct: 126 SIGIQSFQNEKLERLGRIHGCDEAIRAAGLAKQAGLNSFNVDLMHGLPDQSVEDAISDLK 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TL+Y         LP ++   D++     + +  G   YE
Sbjct: 186 QAIALDPPHLSWYQLTIEPNTLYYSKPP----TLPDDDDLWDIFEQGHQLLTEAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK----- 306
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +L+     
Sbjct: 242 ISGYSKPGKQCQHNLNYWRFGDYLGIGCGAHGKISFEDGRIIRTVKVKHPRGYLQADKPY 301

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           + ++   A  E+ F        EF M   RL E    +D+    G  L
Sbjct: 302 LTQETNVADCERPF--------EFFMNRFRLLEACPKQDYPTRTGLPL 341


>gi|226940859|ref|YP_002795933.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
 gi|226715786|gb|ACO74924.1| Probable porphyrin oxidoreductase [Laribacter hongkongensis HLHK9]
          Length = 406

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/376 (36%), Positives = 206/376 (54%), Gaps = 9/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+C+KKCPYCDFNSH  R  V +  +I + L ++     L   RS+ ++F G
Sbjct: 20  PLSLYVHVPWCLKKCPYCDFNSHGVRGPVDEAGYIDALLADLDQSLPLVWGRSLKTVFIG 79

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +    +L G+     +    EIT+EANP + E   F+ YR AG+NR+S+G+
Sbjct: 80  GGTPSLLSAEAFDRLLSGVRARLKLDPQAEITLEANPGTAEAGRFREYRAAGINRLSIGI 139

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ L  LGR H+  EA  A  LA + F   + DL+YALP QT+ + + ++  A+++
Sbjct: 140 QSFDDRFLHALGRVHDGKEAHLAADLAADTFDTFNLDLMYALPGQTLAEAQADVTAAVAH 199

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y LT+E  TLF      G   LP ++ + D+    ++  +  G   YE S  +
Sbjct: 200 RPTHLSCYHLTLEPNTLFAAAPPAG---LPDDDTSADMQEAIEARLAEAGFCHYETSAFA 256

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNLNYW +GDY+GIG GAH ++      V     K P+++L+ V + G AV  
Sbjct: 257 RPGFESRHNLNYWTFGDYLGIGAGAHGKISFADRIVRQMKHKQPQAYLEAVAR-GQAVQN 315

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           +  ++   +  EF+M  LRL  G+    +    G  L     R L    RQG ++    +
Sbjct: 316 EHEIAVVDRPFEFMMNALRLTGGVPTPLFSERTGVPL-ARISRELAEAVRQGLLD-ADPA 373

Query: 375 RLRCTQRGMTMLDSVI 390
           RL  T +G   L+ ++
Sbjct: 374 RLAPTPQGQRFLNDLL 389


>gi|300703569|ref|YP_003745171.1| coproporphyrinogen dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299071232|emb|CBJ42550.1| Coproporphyrinogen dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 425

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 222/384 (57%), Gaps = 14/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +  F+ +   +++    +   R + +
Sbjct: 41  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPDQGIPEARFLAAVRQDLEAALPMVWGRRVHT 100

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 101 IFIGGGTPSLLSAQGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 160

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  LR LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 161 SIGIQSFNDAHLRALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 220

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 221 ALSFETSHVSLYHLTLEPNTYFAKYPP----ALPDDDTAFGMQDWIHARLAAAGYEHYEV 276

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK-N 311
           S ++  G    HNLNYW++GDY+GIGPGAH ++    HRV   +  +HPE++L+     +
Sbjct: 277 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSF-PHRVLREMRHRHPETYLRQAETAS 335

Query: 312 GHAVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGF 367
           G AVV E+  + +     EF++  LRL  G  V  ++   G   R ++ E +   QR G 
Sbjct: 336 GAAVVQEQREVDAADLPFEFMLNALRLTGGFPVTLFQERTGLPLRAIERELDAAEQR-GL 394

Query: 368 IERVQFSRLRCTQRGMTMLDSVIA 391
           + R   + +R T+ G   L+ + A
Sbjct: 395 LARDHVA-IRPTELGQRFLNDLQA 417


>gi|261250158|ref|ZP_05942734.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           orientalis CIP 102891]
 gi|260939274|gb|EEX95260.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           orientalis CIP 102891]
          Length = 391

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/341 (40%), Positives = 197/341 (57%), Gaps = 21/341 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLT-GPRSISS 73
           +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L +++      QL   PR + S
Sbjct: 8   ALSLYVHIPWCVQKCPYCDFNSHALKAEIPEQEYIAALLQDLEADIERYQLNDNPRLLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI  + IA +L GI        ++EIT+EANP ++E   F GY+KAGV RI
Sbjct: 68  IFIGGGTPSLISAEGIANLLAGIEARLPFKPDIEITMEANPGTIEAERFAGYQKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS E+  L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +L+
Sbjct: 128 SVGVQSFEQTKLERLGRIHGQDEAVKAAKLAHQIGLKSFNLDLMHGLPDQSVDQALADLE 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++ L     +  G   YE
Sbjct: 188 KAIELDPPHLSWYQLTIEPNTMFYYKQP----TLPDDDDLWDIFELGHKKLAEAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L      
Sbjct: 244 ISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFSDGRIVRTTKIKHPKGYLA----- 298

Query: 312 GHAVVEKEFLSSEQQ-AD-----EFLMMGLRLREGISVKDW 346
            +  + K +L+SE+  AD     EF M   RL E    +D+
Sbjct: 299 AYDNMVKPYLNSEEHVADQDRPFEFFMNRFRLIEACPKQDF 339


>gi|126438587|ref|YP_001059968.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 668]
 gi|167720745|ref|ZP_02403981.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei DM98]
 gi|217420410|ref|ZP_03451915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 576]
 gi|237813384|ref|YP_002897835.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei MSHR346]
 gi|254181026|ref|ZP_04887624.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1655]
 gi|254298854|ref|ZP_04966304.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 406e]
 gi|126218080|gb|ABN81586.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 668]
 gi|157808917|gb|EDO86087.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 406e]
 gi|184211565|gb|EDU08608.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1655]
 gi|217395822|gb|EEC35839.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 576]
 gi|237505440|gb|ACQ97758.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei MSHR346]
          Length = 405

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 199/341 (58%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPERDYLDALRADLEHALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALAFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGT 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            V E+  +       EF++  LRL +G+    +E   G +L
Sbjct: 321 PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSL 361


>gi|326570282|gb|EGE20327.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis BC8]
 gi|326571019|gb|EGE21043.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis BC7]
          Length = 391

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/362 (37%), Positives = 202/362 (55%), Gaps = 18/362 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CVKKCPYCDFNSH    +V  EN+I++ L++    + L   R I ++F G
Sbjct: 12  PLSLYIHMPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  ++   + DG+   +  +   EIT+EANP ++E + F  Y   G+NR+S+GV
Sbjct: 72  GGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +  +L  LGR HN  +A  AI  AR   F R++ DL+Y LP Q  ++   ++Q A+ 
Sbjct: 132 QSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAID 191

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN- 255
               HLS YQLTIE  T FY+        LP E +  ++  L QS+ + HG + YE+S  
Sbjct: 192 AGATHLSWYQLTIEPNTTFYRTPPQ----LPDEEIMAEIETLGQSVLTKHGFYNYEVSAW 247

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR------VAISIEKHPESWLKMVR 309
           H    A   HNLNYW++GDY+ IG GAH ++ + +H             + P+ +L    
Sbjct: 248 HGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAF-- 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQG 366
           ++   +V  E +S +    EF+M  LRL++G+S   +E   G     +D E    LQ QG
Sbjct: 306 EDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEM-LPLQHQG 364

Query: 367 FI 368
            +
Sbjct: 365 LM 366


>gi|167903811|ref|ZP_02491016.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei NCTC
           13177]
          Length = 405

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 199/341 (58%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPERDYLDALRADLEHALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALAFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGT 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            V E+  +       EF++  LRL +G+    +E   G +L
Sbjct: 321 PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSL 361


>gi|76808674|ref|YP_334428.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1710b]
 gi|126453675|ref|YP_001067260.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1106a]
 gi|167825333|ref|ZP_02456804.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 9]
 gi|167846835|ref|ZP_02472343.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei B7210]
 gi|167895427|ref|ZP_02482829.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 7894]
 gi|167920051|ref|ZP_02507142.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei BCC215]
 gi|226193887|ref|ZP_03789489.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pakistan 9]
 gi|242315904|ref|ZP_04814920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1106b]
 gi|254191872|ref|ZP_04898375.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254258471|ref|ZP_04949525.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1710a]
 gi|76578127|gb|ABA47602.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1710b]
 gi|126227317|gb|ABN90857.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1106a]
 gi|157939543|gb|EDO95213.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|225934192|gb|EEH30177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pakistan 9]
 gi|242139143|gb|EES25545.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1106b]
 gi|254217160|gb|EET06544.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1710a]
          Length = 405

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 199/341 (58%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPERDYLDALRADLEHALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALAFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYTKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGT 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            V E+  +       EF++  LRL +G+    +E   G +L
Sbjct: 321 PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSL 361


>gi|134280350|ref|ZP_01767061.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 305]
 gi|134248357|gb|EBA48440.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 305]
          Length = 405

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 199/341 (58%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPERDYLDALRADLEHALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALAFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGT 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            V E+  +       EF++  LRL +G+    +E   G +L
Sbjct: 321 PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSL 361


>gi|332994273|gb|AEF04328.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas sp. SN2]
          Length = 379

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/385 (34%), Positives = 221/385 (57%), Gaps = 26/385 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH  +  + ++ ++   L ++    +  G R++ +IF GG
Sbjct: 6   LSLYVHIPWCVQKCPYCDFNSHGLKSALPEKEYVAHLLDDLAIDAKRIGDRTVETIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   + I+ ++ GI +   ++ N EIT+EANP +VE   F G+ +AG+NRIS+G+Q
Sbjct: 66  GTPSLFSAEAISDLVKGIRERVNLADNAEITMEANPGTVESGRFAGFYQAGINRISVGIQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+ ++AI AI+ A +   P  + DL++ LP+Q++     ++ +AL+ 
Sbjct: 126 SFQPAHLKVLGRIHDDTQAIEAINQAHSAGLPTFNLDLMHGLPEQSVENAMSDVDKALAL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T FY    +    LP +++  D+     +   A G   YEIS ++
Sbjct: 186 SPYHLSWYQLTIEPNTPFYSRPPE----LPDDDILWDIQEQGHARLKAAGYEQYEISAYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYWR+GDY+GIG GAH ++  + +  +  +++ KHP  ++++ R      
Sbjct: 242 KAGHQCQHNLNYWRFGDYLGIGCGAHGKITDIATGTITRTVKIKHPRGYMEISRP----- 296

Query: 316 VEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
               +L +E Q        EF M   RL E   ++D+  L G  L  E +  L   Q +G
Sbjct: 297 ----YLDTETQVPAEDLPFEFFMNRFRLVEPCPIEDYPALTGVELTKEYQDALDDAQAKG 352

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIA 391
            ++ +  +  + T +G   L+++++
Sbjct: 353 LLD-ITDTHWQVTAKGRRYLNTLLS 376


>gi|167036140|ref|YP_001671371.1| coproporphyrinogen III oxidase [Pseudomonas putida GB-1]
 gi|166862628|gb|ABZ01036.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida GB-1]
          Length = 391

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 214/379 (56%), Gaps = 16/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSANALGRLLRGVEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLEALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+    +    LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMTEHGYRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR--KNGH 313
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+  + + + P+ +L + +  K G 
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKPFKAG- 312

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
               ++ L  ++   EFLM  LRL +G+  + +    G  L+   E  R  +++G ++ V
Sbjct: 313 ----EKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLEQLREARRAAEQKGLLQ-V 367

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  RL  T RG   L+ ++
Sbjct: 368 EPDRLVATPRGQLFLNDLL 386


>gi|47215409|emb|CAG01106.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 412

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/325 (36%), Positives = 201/325 (61%), Gaps = 6/325 (1%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           + WP+C+++C YC+FN ++ R    +    +    E + + +L+    I+S+FFGGGTPS
Sbjct: 1   LQWPYCLRRCTYCNFNKYISREN-NESIMAECLQKEAESLLKLSQVSCITSVFFGGGTPS 59

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L  P  IA +L+ ++++ +++ + E+T+E NP+ V  +  + Y++AGVNR S+GVQSL++
Sbjct: 60  LAHPSTIAALLETVSRHASLTGDAEVTLEVNPTPVGTSKLEDYQQAGVNRFSIGVQSLQD 119

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             L+ LGR+H + +A+  +  AR + P R+S D+++  PKQ++  WE EL   L    DH
Sbjct: 120 DDLKLLGRDHTSRQALQTLDKARRLCPGRVSVDVLFGRPKQSVESWEEELSELLGVCDDH 179

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           +SLYQLT+E+GT  ++  + G++ LP+E V  ++Y   ++I    G   YE+SN +   A
Sbjct: 180 VSLYQLTLERGTQLFRQVEGGEVTLPAEEVTAEMYERARAILHRRGFLQYEVSNFARNNA 239

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRVKVGSH----RVAISIEKHPESWLKMVRKNGHAVVE 317
            S HN++YW+   YIG+GPGAH R  +G+     R A +    P++W++ V++ GH    
Sbjct: 240 VSHHNMSYWQGRQYIGVGPGAHGRFVLGAQGGAVREARTQTLEPDAWIREVQQRGHGTRR 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGIS 342
           +  L   +  +E L MG+R  EGIS
Sbjct: 300 RIQLDHLELLEEVLAMGMRTTEGIS 324


>gi|257092564|ref|YP_003166205.1| coproporphyrinogen III oxidase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045088|gb|ACV34276.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 417

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/399 (36%), Positives = 218/399 (54%), Gaps = 21/399 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---------RRYKVGQENFIQSF 55
           SA  N +  +    L +YVH P+CV+KCPYCDFNSH          R+  + + +++ + 
Sbjct: 19  SAAGNPVEFRNPPPLALYVHVPWCVQKCPYCDFNSHALPVGSSIGQRQTAIPESDYLAAL 78

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           + +++    L   R + S+F GGGTPSL+  + +  +L  +     +  N EIT+EANP 
Sbjct: 79  IADLESALPLVWGRRVDSVFIGGGTPSLLSGEGVDELLAAVRSRLPLLPNAEITLEANPG 138

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
           +VE   F  +R AGVNR+SLG+QS   + L  LGR H+  +A  AI +A + F   + DL
Sbjct: 139 TVEAGKFAAFRAAGVNRLSLGIQSFNSRHLTALGRIHDDRDARLAIGIAASHFDNFNLDL 198

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +Y LP QT+ +   ++  AL+ A  HLS YQLTIE  T F          LP  +   D+
Sbjct: 199 MYGLPGQTLAEALADVDAALACAPPHLSCYQLTIEANTAFAARPP----ALPDPDTCADM 254

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
            +  ++  +A G   YEIS  +  G E  HNLNYW++GDY+GIG GAH ++ +   RV  
Sbjct: 255 QDAIETKLAAAGYRHYEISAFARAGQECRHNLNYWQFGDYLGIGAGAHGKLTL-HDRVQR 313

Query: 296 SIE-KHPESWLKMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
            +  K PE +L  V       V++EF ++  +   EF+M  LRL EG +   +EM     
Sbjct: 314 QMRWKRPEQYLAKVAAG--TPVQQEFTVAPAELPCEFMMNALRLVEGFAAPLFEMRTALP 371

Query: 354 L-DIECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           L  IE + R  +R G ++R Q  R+  ++RG   L+ ++
Sbjct: 372 LISIESQLRQAERDGLLQR-QGQRIAPSERGRRFLNQLV 409


>gi|327482669|gb|AEA85979.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri DSM 4166]
          Length = 392

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/399 (35%), Positives = 221/399 (55%), Gaps = 25/399 (6%)

Query: 4   LSAYENNMTGQGS---NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++A     TGQG      L  YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++
Sbjct: 2   IAASPAPATGQGRFELPPLAAYVHIPWCVRKCPYCDFNSHTAGPELPEEAYVAALLADLR 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              +    R +SSIFFGGGTPSL   + +A I++G+      + ++EIT+EANP + E  
Sbjct: 62  ADLEHVQGRRLSSIFFGGGTPSLFSARALAAIVEGLEHLVGFADDIEITLEANPGTFEQA 121

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
            F+ YR+ G++R+S+GVQS +   L+ LGR H+  EAI A  +AR   F   + DL++ L
Sbjct: 122 KFRDYRQLGIDRLSIGVQSFQAAKLKALGRIHDGDEAIRAADMARAAGFENFNLDLMHGL 181

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++     +L+ A++    HLS YQLT+E  TLF+         LP +++  D+    
Sbjct: 182 PDQSLEDALSDLRTAIAQQPTHLSWYQLTLEPNTLFWSQPPQ----LPEDDILWDIQEAG 237

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           Q++   HG   YE S ++  G ++ HNLNYW +GD++GIG GAH+++     R+      
Sbjct: 238 QALLGEHGYRQYETSAYAQPGRQARHNLNYWTFGDFLGIGAGAHAKLSHADGRIL----- 292

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQ--AD----EFLMMGLRLREGISVKDWEMLAGRN 353
              SW   + K+ +    K F + E+Q  AD    EFLM  LRL +G+    +    G  
Sbjct: 293 --RSWKTRLPKD-YLDPGKAFRAGEKQLTADELPFEFLMNVLRLTDGVPAVLFTQRTGLA 349

Query: 354 LD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           LD   +  RN + +G +     +RL  T +G   L+ ++
Sbjct: 350 LDAIAKPRRNAEARGLLSN-DPARLVATPKGQLFLNDLL 387


>gi|145630358|ref|ZP_01786139.1| coproporphyrinogen III oxidase [Haemophilus influenzae R3021]
 gi|144984093|gb|EDJ91530.1| coproporphyrinogen III oxidase [Haemophilus influenzae R3021]
          Length = 383

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/340 (37%), Positives = 201/340 (59%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +A G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +S   +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|293391741|ref|ZP_06636075.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952275|gb|EFE02394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 389

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 202/344 (58%), Gaps = 17/344 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + +++++Q  L ++       ++    R + S
Sbjct: 13  PLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEQDYVQHLLADLTADLARYQESVQQRPLHS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL     IA +L  I +    + N+EIT+E NP +VE   F+GY +AGVNRI
Sbjct: 73  IFIGGGTPSLFSSDTIAYLLAQIEQRIPFAPNIEITLETNPGTVEAARFRGYVQAGVNRI 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  ++ L+ LGR HNA EA +A+  A     R  + DL++ LP QT+ +   +L+
Sbjct: 133 SMGIQSFSDEKLQKLGRIHNAEEAKSAVGFAGVSHLRSFNLDLMHGLPNQTLNEALDDLR 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +A++ A  HLS YQLTIE  T+F Y+       +LP ++   D++     + +A G   Y
Sbjct: 193 QAIALAPPHLSWYQLTIEPNTMFAYR-----PPMLPDDDELWDIFEQGHQLLTAAGYQQY 247

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRK 310
           E S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++    
Sbjct: 248 ETSAYAKAGFQCQHNLNYWRFGDYLAIGCGAHGKLSFPNGNILRYSKTKHPKGYMR---- 303

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            G  + E+  +S+E +  EF M   RL E +   D+E L G  L
Sbjct: 304 -GEYLYEERLVSAEDRPFEFFMNRFRLLEPVPKSDFEQLTGLPL 346


>gi|254468648|ref|ZP_05082054.1| putative oxygen-independent coproporphyrinogen III oxidase [beta
           proteobacterium KB13]
 gi|207087458|gb|EDZ64741.1| putative oxygen-independent coproporphyrinogen III oxidase [beta
           proteobacterium KB13]
          Length = 381

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 217/381 (56%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S+GVYVH P+C+ KCPYCDFNSH     + +  +E ++ + + E  + + L   R I+SI
Sbjct: 7   SVGVYVHLPWCIHKCPYCDFNSHEASQEKVRSLEEEYVDTLIEEFNFYQDLIKERIITSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSLI P+     +  I KN+ +S   EIT+EANP ++++  FQ Y   G+NR+S
Sbjct: 67  FFGGGTPSLISPKLFEKFITAIHKNFDLSK-TEITLEANPGTIDIKYFQSYADLGINRVS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS  +  L+ L R H++ EA  AI + +  F   + DL++ LP Q++ +   ++  A
Sbjct: 126 LGIQSFNDNHLQSLERIHSSEEAKQAIVVVKKYFKNFNLDLMFGLPNQSLAELTEDIDTA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSAHGLHAYEI 253
           +S+  +HLS Y LTIE  T F+K   +    +PS++ A ++ +L  + + ++H  H YE 
Sbjct: 186 ISFNPNHLSFYHLTIEPQTRFFKSKPE----IPSDDDAYEMLSLVLKQLKNSHFDH-YET 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S  +    +  HNLNYW +GDY+GIG GAHS++   +    +   K+P+ ++  V K   
Sbjct: 241 SAFAQPDHQCRHNLNYWTFGDYLGIGAGAHSKLTHENEIFRMDNTKNPKQYITEVAKQN- 299

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQ 372
               K  +  +    EFLM  LRL  G + + +    G +L D++ + +   Q  +    
Sbjct: 300 FFPNKTLIPQQDLPFEFLMNALRLTHGFTKETYSQRTGLSLDDVKSKLHPSFQQDLLYED 359

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              L+ T++G+  L+ ++ NL
Sbjct: 360 HEILKPTEKGVLFLNEILHNL 380


>gi|262147277|ref|ZP_06028076.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
 gi|262031271|gb|EEY49886.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
          Length = 375

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 188/335 (56%), Gaps = 11/335 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISSIFFGGGTPSLI 84
           ++KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + SIF GGGTPSLI
Sbjct: 1   MQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHSIFIGGGTPSLI 60

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RIS+GVQS E + 
Sbjct: 61  SAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFEPEK 120

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A++    HLS
Sbjct: 121 LARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLS 180

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS +S  G + 
Sbjct: 181 WYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYEISGYSKPGYQC 236

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLS 322
            HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     A ++ E L 
Sbjct: 237 QHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSEQLV 296

Query: 323 SEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
           ++Q    EF M   RL E     D+    G  +D+
Sbjct: 297 ADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 331


>gi|312883843|ref|ZP_07743560.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368301|gb|EFP95836.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 389

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 196/349 (56%), Gaps = 21/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----RQLTGPRSISSI 74
           L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L +++      R    PR + SI
Sbjct: 7   LSLYVHIPWCVQKCPYCDFNSHTLKAEIPEDEYIAALLQDLRDDLLRYRLNDSPRVLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI P+ IA +L+GI +  +   ++EIT+EANP ++E   F GY+KAGV RIS
Sbjct: 67  FIGGGTPSLISPRGIAALLNGIEQQISFQPDIEITMEANPGTIEAERFAGYQKAGVTRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS E   L  LGR H   EAI A  LA  I     + DL++ LP QT+ Q   +L +
Sbjct: 127 IGVQSFEAAKLSRLGRIHGQEEAINAARLAHKIGLKSFNLDLMHGLPDQTIEQALADLDQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+  +  HLS YQLTIE  TLFY         LP ++   D++ +     +  G   YE 
Sbjct: 187 AIELSPPHLSWYQLTIEPNTLFYYKQPQ----LPDDDDLWDIFEIGHQKLTEAGYVQYET 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP+ +L       
Sbjct: 243 SGYSKPEYQCQHNLNYWRFGDYLGIGCGAHGKLSFSDGRIIRTTKIKHPKGYLAAFDN-- 300

Query: 313 HAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLD 355
              + K +LSSE   +      EF M   RL E     D+    G +L+
Sbjct: 301 ---MVKPYLSSEHNVEDAERPFEFFMNRFRLTEACPKNDFISTTGLSLN 346


>gi|269838405|ref|YP_003320633.1| oxygen-independent coproporphyrinogen III oxidase [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787668|gb|ACZ39811.1| oxygen-independent coproporphyrinogen III oxidase [Sphaerobacter
           thermophilus DSM 20745]
          Length = 393

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/383 (36%), Positives = 210/383 (54%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            LGVY+H PFC + CPYCDFN++ R+  +  E ++++ + EM       GPR   SIFFG
Sbjct: 10  PLGVYIHIPFCTRICPYCDFNTYARQEHLIPE-YVEALIGEMDLTLAAIGPRPAQSIFFG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ +A ++D + + + +  + E+++EANP +++     G+ +AGVNRISLGV
Sbjct: 69  GGTPSLLPPELVARLIDAVRERFPLPDDAEVSLEANPETIDAATLDGFLQAGVNRISLGV 128

Query: 138 QSLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q+ + + L+ LGR H  +  E   A   A  +    S D I+  P QTM +WE +L   L
Sbjct: 129 QTQQARGLKVLGRAHKPDVPERALAAARAAGV-DNFSVDFIFGWPNQTMAEWEDDLDSIL 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  DHLSLY L +E GT + +  + G L +P E+   D+Y       +A G H YEISN
Sbjct: 188 RWQPDHLSLYSLIVEPGTPYERAVQRGILTVPDEDTTADMYERALDRLAAAGWHHYEISN 247

Query: 256 HSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            +      S HNL YWR G Y+G+G GAH+ +      V  S  + P  ++  VR+    
Sbjct: 248 WARTPEHRSRHNLLYWRNGHYLGLGAGAHAHLD----NVRSSNIRLPAKYIAAVREGRLP 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECER---NLQRQGFIER 370
           + E+E L       E +M+GLRL  EG+S   +    GR L+    R   +L   G +  
Sbjct: 304 IDEREELDETTAMAETMMLGLRLPEEGVSAAAFAARHGRELEEIYGRELTDLTDAGLL-Y 362

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
              + +R T+RG+ + + V A  
Sbjct: 363 WDGAHVRLTRRGLLLANEVAARF 385


>gi|192362341|ref|YP_001980647.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cellvibrio japonicus Ueda107]
 gi|190688506|gb|ACE86184.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cellvibrio japonicus Ueda107]
          Length = 393

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 207/387 (53%), Gaps = 20/387 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + + ++I +   ++   + L   R I+SIFFGG
Sbjct: 8   LALYIHVPWCIRKCPYCDFNSHQANNDIPEADYIAALRQDLACDQSLAQGRKITSIFFGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q I  IL    +      ++EIT+EANP + E   F G+R AGVNR+S+G+Q
Sbjct: 68  GTPSLLSAQAIGQILVDAEQLIGFEPHIEITLEANPGTFEQEKFSGFRAAGVNRLSIGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +Q L  LGR H   EA+ A+++AR   F  ++ DL++ LP Q++   + +LQ+A+  
Sbjct: 128 SFNDQQLHLLGRVHGRDEALRAVNVARKAGFDNINLDLMHGLPGQSVGDAQADLQQAIEL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLTIE+ T FY        VLP E +  D+ +  Q + +A G   YEIS ++
Sbjct: 188 EPEHLSWYQLTIEQNTAFYSAPP----VLPEEEILADIQDAGQLLLAAAGYEHYEISAYA 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRK----- 310
                S HNLNYW +GDY+GIG GAH +V +   +  + + K   P+ +L          
Sbjct: 244 RAKQFSRHNLNYWEFGDYLGIGAGAHGKVTLPEQQNILRLWKTRLPKHYLDAATSARIST 303

Query: 311 --NGHAVV---EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
              GH        + L  E    EF+M  LRL  G+  + +    G +      C   L 
Sbjct: 304 NLQGHQNPFGGGSDLLGEESLPLEFMMNALRLHRGVPEQYFAQRTGLDFSAIASCWDELA 363

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           R+  +E      LR T  G   L+ V+
Sbjct: 364 RKKLVELAD-GALRPTPLGRRFLNRVL 389


>gi|331005485|ref|ZP_08328863.1| coproporphyrinogen III oxidase [gamma proteobacterium IMCC1989]
 gi|330420677|gb|EGG94965.1| coproporphyrinogen III oxidase [gamma proteobacterium IMCC1989]
          Length = 399

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 201/343 (58%), Gaps = 15/343 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +Y+H P+CV+KCPYCDFNSH    K   + + +++++   ++Q   Q T  R +SSIF
Sbjct: 9   LSLYIHIPWCVQKCPYCDFNSHQAEQKNNTLNELDYVETLKNDLQLESQFTYGRKLSSIF 68

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS+    +IA ILD   K      ++EIT+EANP + E   F G+  AGVNR+S+
Sbjct: 69  FGGGTPSIFSAHSIAAILDHAKKIIGFEDDIEITLEANPGTFEQEKFAGFYAAGVNRLSI 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  E+ L+ LGR HN+ EA  AI +A+   F  ++ D+++ LP+Q++     +LQ+A
Sbjct: 129 GVQSFNEKHLQTLGRIHNSDEAKRAISIAKKAGFSNINIDIMHGLPQQSVDDAMKDLQQA 188

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  +  H+S YQLTIE  T FY+        LP++++  D+      + + +G   YEIS
Sbjct: 189 IDCSPQHISWYQLTIEANTAFYRQPP----TLPNDDILADIQERGSLLLTDNGFAQYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNG 312
             S     SLHNLNYW++GDY+G+G GAH ++   S+   I  +K   P+ +L    KN 
Sbjct: 245 AFSKNNQRSLHNLNYWQFGDYLGVGAGAHGKITDISNGRIIRRQKTRLPDHYL----KNA 300

Query: 313 HAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNL 354
            A   K+   +  + + EF+M  LRL EG+    +E   G  L
Sbjct: 301 KAPKTKQHTVATHELNIEFMMNALRLIEGVPSDFFEKRTGLAL 343


>gi|187478425|ref|YP_786449.1| coproporphyrinogen III oxidase [Bordetella avium 197N]
 gi|115423011|emb|CAJ49541.1| putative oxygen-independent coprophorphyrinogen III oxidasee
           [Bordetella avium 197N]
          Length = 405

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 213/374 (56%), Gaps = 7/374 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L VYVH P+CV+KCPYCDFNSH    + + +  ++ +   +++    L   R + S+F G
Sbjct: 31  LSVYVHVPWCVRKCPYCDFNSHAMPGQDIPERAYLDALRADLEQAVPLVWGRQVISVFIG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     +  + EIT+EANP + E + F  Y  +GV R SLG+
Sbjct: 91  GGTPSLLSAAGLDELLAMLRACLNLLPDAEITMEANPGTAEASRFLDYAASGVTRFSLGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L  LGR H++++A AAI +A+    R++ D+++ALP Q +     +L+ ALS+
Sbjct: 151 QSFDDAQLHKLGRIHDSAQARAAIEMAQRAVSRVNLDVMFALPGQDINACVADLREALSF 210

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K   +    LP ++ +  + +  ++  +  GL  YE+S ++
Sbjct: 211 GTEHLSLYHLTLEPNTVFAKYPPE----LPDDDDSAAMQDAVEATLADAGLARYEVSAYA 266

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVV 316
             GA   HN+NYW +GDY+G+GPGAH ++      V  +  ++PESW+ + + ++G  V 
Sbjct: 267 RQGARCKHNVNYWEFGDYLGLGPGAHGKLSFHDRIVREARHRNPESWMQRAMARDGSHVA 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQFSR 375
           E   +  ++   EF++  LRL++G++   +    G +L  I  + +   Q  +     +R
Sbjct: 327 ENRQVGPDELPFEFMLNALRLKDGVAASSFSERTGLSLAAIAHQLDAASQRGLLDADPTR 386

Query: 376 LRCTQRGMTMLDSV 389
           LR T  G   L+ +
Sbjct: 387 LRATALGWRFLNDL 400


>gi|294341382|emb|CAZ89799.1| putative Coproporphyrinogen III oxidase [Thiomonas sp. 3As]
          Length = 400

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+K+CPYCDFNSH  R    + ++ ++ +   ++     L   R + S+F
Sbjct: 17  PLSLYVHLPWCLKQCPYCDFNSHEWRAGGSIPEQAYLAALRADLDAALPLVWGRRVISVF 76

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I  ++  +     + ++ EIT+EANP + E + F  + +AGVNR+S+
Sbjct: 77  IGGGTPSLFSPEAIDQLITDVRARLPLVADAEITLEANPGTFERDRFAAFAQAGVNRLSI 136

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS ++  LR LGR H+A +A  A+  A   F   + DL++ALP+Q M   + ++  AL
Sbjct: 137 GVQSFDDDRLRALGRVHDARQAHDAVAEAARHFASFNLDLMFALPQQDMAGCKADVHEAL 196

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLSLYQLT+E  TLF +        LP +++A D+ +    +  A GL  YE+S 
Sbjct: 197 AHQPPHLSLYQLTLEPNTLFARQPPK----LPDDDLAADMQHAVADLAEAAGLQRYEVSA 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           ++  G    HNLNYW++GDYIGIG GAHS++   +HRV      +HP+ +++     G A
Sbjct: 253 YAAPGHRCRHNLNYWQFGDYIGIGAGAHSKLTF-AHRVVRQTRWRHPQRYMEQA-AQGLA 310

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           V  +  +S      EF++  LRLREG+ V   E+ A R 
Sbjct: 311 VETEVEVSRSDLPFEFMLNALRLREGVRV---ELFAQRT 346


>gi|37525144|ref|NP_928488.1| coproporphyrinogen III oxidase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784570|emb|CAE13470.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 376

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 215/377 (57%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L +++    +   R +++IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLKTDLPMVNGREVTTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q +  +LDG+     VS   EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSSQAMQQLLDGVRALLPVSPQAEITMEANPGTVEADRFSGYQQAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EA  A HLA ++  R  + DL++ LP Q++ +   +L++A+  
Sbjct: 127 SFSPDKLVRLGRIHGPDEAKRAAHLAASLGLRSFNLDLMHGLPNQSLDEALDDLRQAIEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F         VLP ++   D+++    + +A G   YE S ++
Sbjct: 187 SPPHLSWYQLTIEPNTSFGSRPP----VLPDDDALWDIFSQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTVKTKHPRGYMQ-----GRYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQF 373
           ++  + +E +  EF M   RL E +  +D+    G    ++  + ++ L   G++     
Sbjct: 298 KQHQVENEDRPFEFFMNRFRLLEAMPKQDFSDFTGLSETSIRTQIKQALA-AGYLSETA- 355

Query: 374 SRLRCTQRGMTMLDSVI 390
           +  + TQ+G   L+S++
Sbjct: 356 THWQITQKGKLFLNSLL 372


>gi|53720178|ref|YP_109164.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei K96243]
 gi|53726004|ref|YP_103674.1| coproporphyrinogen III oxidase [Burkholderia mallei ATCC 23344]
 gi|67643941|ref|ZP_00442684.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|121598921|ref|YP_992154.1| coproporphyrinogen III oxidase [Burkholderia mallei SAVP1]
 gi|124383729|ref|YP_001028599.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10229]
 gi|126448733|ref|YP_001081502.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10247]
 gi|166998296|ref|ZP_02264156.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
 gi|167739727|ref|ZP_02412501.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 14]
 gi|167816930|ref|ZP_02448610.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 91]
 gi|167912077|ref|ZP_02499168.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 112]
 gi|254175530|ref|ZP_04882190.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei ATCC 10399]
 gi|254196044|ref|ZP_04902469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei S13]
 gi|254202372|ref|ZP_04908735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei FMH]
 gi|254207706|ref|ZP_04914056.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei JHU]
 gi|254356394|ref|ZP_04972670.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei 2002721280]
 gi|52210592|emb|CAH36575.1| putative coproporphyrinogen III oxidase family protein
           [Burkholderia pseudomallei K96243]
 gi|52429427|gb|AAU50020.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Burkholderia mallei ATCC 23344]
 gi|121227731|gb|ABM50249.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei SAVP1]
 gi|124291749|gb|ABN01018.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126241603|gb|ABO04696.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147746619|gb|EDK53696.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei FMH]
 gi|147751600|gb|EDK58667.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei JHU]
 gi|148025391|gb|EDK83545.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei 2002721280]
 gi|160696574|gb|EDP86544.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei ATCC 10399]
 gi|169652788|gb|EDS85481.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei S13]
 gi|238525410|gb|EEP88838.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|243065371|gb|EES47557.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
          Length = 405

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 198/341 (58%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPERDYLDALRADLEHALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALAFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++     S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYAKPHRRSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGT 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            V E+  +       EF++  LRL +G+    +E   G +L
Sbjct: 321 PVQEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSL 361


>gi|197284233|ref|YP_002150105.1| coproporphyrinogen III oxidase [Proteus mirabilis HI4320]
 gi|227357864|ref|ZP_03842212.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
 gi|194681720|emb|CAR40866.1| putative oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis HI4320]
 gi|227161974|gb|EEI46992.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 199/335 (59%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++       G R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHTLKGEVPHQEYVQHLLNDLDADLTHVGSREVQTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++A +L G+ +   V+ + EIT+EANP +VE   F G+++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAESMADLLYGVKERIAVAPDAEITMEANPGTVEAERFAGFQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H+A EA  A  LA+ +  R  + DL++ LP Q+++Q   +LQ+A++ 
Sbjct: 127 SFGNDKLIRLGRIHDADEAKNAARLAKELGLRSFNLDLMHGLPDQSLSQALSDLQQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F          LP +++  D+++    + +A G   YE S + 
Sbjct: 187 SPPHLSWYQLTIEPNTQFGSRPPK----LPDDDMLWDIFSEGDKLLTAAGYQQYETSAYC 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP+ ++      G  + 
Sbjct: 243 KPGFQCQHNLNYWRFGDYLGIGCGAHGKISFADGRIMRTVKTKHPKGFMA-----GRYLH 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           ++ ++ ++ +  EF M   RL E    +D+    G
Sbjct: 298 QQNWVDNDDRPFEFFMNRFRLLEAFPRQDFSDYTG 332


>gi|104779591|ref|YP_606089.1| coproporphyrinogen III oxidase [Pseudomonas entomophila L48]
 gi|95108578|emb|CAK13272.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas entomophila L48]
          Length = 386

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 215/378 (56%), Gaps = 14/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +Y+H P+CV+KCPYCDFNSH     + ++ +I + L ++ Q M  + G R IS+IFF
Sbjct: 13  PLSLYIHIPWCVRKCPYCDFNSHQAGPSLPEDEYIDALLADLDQEMPAVQG-RPISTIFF 71

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL     +  +L G+ +    + ++EIT+EANP + E   F+ YR+ G+NR+S+G
Sbjct: 72  GGGTPSLFSADALDRLLRGVEQRIPFAPDIEITLEANPGTFEQEKFKAYRQTGINRLSIG 131

Query: 137 VQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+
Sbjct: 132 VQSFQPAKLERLGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAI 191

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++ + HG   YE+S 
Sbjct: 192 ELAPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMAEHGYRQYEVSA 247

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           ++     + HNLNYWR+GD+IGIG GAH ++     R+  + + + P+ +L   +   + 
Sbjct: 248 YAQADRAARHNLNYWRFGDFIGIGAGAHGKLSFPDGRILRTWKTRLPKDYLNPSKP--YK 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
             EK  L +++   EFLM  LRL +G+  + + +  G  L    E  R  +++G + RV+
Sbjct: 306 AGEK-LLPADELPFEFLMNALRLTDGVEAELFSLRTGLPLAQLTEARREAEQKGLL-RVE 363

Query: 373 FSRLRCTQRGMTMLDSVI 390
             RL  T RG   L+ ++
Sbjct: 364 PDRLAATPRGQLFLNDLL 381


>gi|109899593|ref|YP_662848.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas atlantica T6c]
 gi|109701874|gb|ABG41794.1| coproporphyrinogen III oxidase, anaerobic [Pseudoalteromonas
           atlantica T6c]
          Length = 396

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 131/355 (36%), Positives = 203/355 (57%), Gaps = 14/355 (3%)

Query: 8   ENNMTGQGSNSL---GVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMR 63
           E N  G+ + +L    +Y+H P+CV+KCPYCDFNSH ++   + +  ++   L ++    
Sbjct: 6   EMNDAGETNTTLPPVALYIHIPWCVQKCPYCDFNSHGQKQDSLPEAEYVSHLLDDLAQDA 65

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R + SIF GGGTPSL  P  I  +L G+ +   ++ + EIT+EANP +VE   F 
Sbjct: 66  NLIGDRPVHSIFIGGGTPSLFSPDAIGRLLTGVRERVNLAVDAEITLEANPGTVESERFN 125

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
           G+ +AGVNRIS+GVQS +++ L  LGR H+  +A+ A   ARN      + DL++ LP+Q
Sbjct: 126 GFAQAGVNRISIGVQSFQQEKLERLGRIHDEQQALNAAGYARNAGLNSFNLDLMHGLPEQ 185

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++     +L++ ++    HLS YQLTIE  T F+         LP +++  D+      I
Sbjct: 186 SIDDALFDLRQGIAQQPPHLSWYQLTIEPNTQFHSKPP----TLPEDDILWDIQEQGHDI 241

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIE-KH 300
            +A G   YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++ +  S ++  +++ KH
Sbjct: 242 LTAAGYEQYEISGYSLAGQQCQHNLNYWRFGDYLGIGCGAHGKITLKDSGQILRTVKVKH 301

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           P+ ++ + R   H   ++  +  E+   EF M  LRL E    +D+    G   D
Sbjct: 302 PKGYMDLTRSYMH---QQHTVQDEELPFEFFMNRLRLLEPCPKQDFSAFTGLVFD 353


>gi|161525575|ref|YP_001580587.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|189349697|ref|YP_001945325.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|160343004|gb|ABX16090.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
 gi|189333719|dbj|BAG42789.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
          Length = 404

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/376 (34%), Positives = 210/376 (55%), Gaps = 11/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS +E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT  +   +++ ALS
Sbjct: 148 IQSFDEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTFDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +       HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHRCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEHALA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           E+  + +     EF++  LRL EG  V  +    G  +    E  LQ   R+G I R  F
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFVERTGLPIST-IEPALQEAERRGLITR-DF 380

Query: 374 SRLRCTQRGMTMLDSV 389
           +R+  T  G   L+ +
Sbjct: 381 TRIAPTPLGQRFLNDL 396


>gi|255021076|ref|ZP_05293129.1| hypothetical protein ACA_2803 [Acidithiobacillus caldus ATCC 51756]
 gi|254969490|gb|EET26999.1| hypothetical protein ACA_2803 [Acidithiobacillus caldus ATCC 51756]
          Length = 399

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 208/371 (56%), Gaps = 7/371 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +L VYVH P+C+ KCPYCDFNS+    +   E+++ + + +++        R + SIF
Sbjct: 7   APALSVYVHLPWCLAKCPYCDFNSYAAP-EFPAEHYVDALIADLERELPRIWGRPVHSIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++IA +L  +     +   +E+++EANP + E   F+ +R+AG+ R+SL
Sbjct: 66  LGGGTPSLFPPESIARLLSELRARLRLMPGLEVSLEANPGASEAARFRAFRQAGITRLSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS ++  L  LGR H+   A+AA+  +    F   + DLI+ALP Q +     +L+RA
Sbjct: 126 GVQSFDDGFLARLGRIHDGRAAMAAVSAILEAGFASWNLDLIFALPGQDLAAALADLERA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+YA  HLSLYQLT+E GT F +    G   LP E++A D+    +      GL  YEIS
Sbjct: 186 LAYAPPHLSLYQLTLEAGTPFARQAPSG---LPGEDLAADMELALRERLQEAGLARYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK-HPESWLKMVRKNGH 313
            H+  G E  HN NYWR+GDY+GIG GAH ++ +    +  S +   PES+L        
Sbjct: 243 AHARPGQECWHNRNYWRFGDYVGIGAGAHGKITLPGQGIWRSQKPARPESYLSDALGPAA 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQ 372
            +    +++  ++  EFL+  LRL EG S   +E   G   L IE +    R+  +   +
Sbjct: 303 QIGRGHWVAPAERPFEFLLNTLRLLEGFSCAQFEAGTGLPCLQIEPQLRRARKEGLLTFE 362

Query: 373 FSRLRCTQRGM 383
             R R T+ G+
Sbjct: 363 DGRWRPTRFGL 373


>gi|56476730|ref|YP_158319.1| coproporphyrinogen III oxidase [Aromatoleum aromaticum EbN1]
 gi|56312773|emb|CAI07418.1| Oxygen-independent coprophorphyrinogen III oxidase [Aromatoleum
           aromaticum EbN1]
          Length = 407

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/381 (38%), Positives = 203/381 (53%), Gaps = 11/381 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSI 71
            S  L +YVH+P+CVKKCPYCDFNSH  R   G+   + +I + L +++        R +
Sbjct: 27  ASPPLALYVHYPWCVKKCPYCDFNSHASRGGPGEIPEQAYIDALLADIETALPQVWGRRV 86

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+F GGGTPSL+    +  +L G+     +    EIT+EANP +VE   F+ Y  AGVN
Sbjct: 87  LSVFIGGGTPSLMSAAALDRLLTGVRMLLQLDPLAEITLEANPGTVEAGRFRDYCAAGVN 146

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+QS ++  L  LGR H+  EA  AI  A   F R++ DL+YALP+QT  Q   +L
Sbjct: 147 RLSLGIQSFDDAQLVRLGRIHDGREARVAIDTALANFDRVNLDLMYALPEQTPEQALADL 206

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL+    HLS YQLT+E  T F+         LP  + A D+ +  ++     G   Y
Sbjct: 207 DTALATGATHLSCYQLTLEPNTPFHHAPPP----LPDTDTAADMQDAIEARLGGAGFRHY 262

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E S  +  G E  HNLNYW +GDY+GIG GAH ++      V     KHP  +L    K+
Sbjct: 263 ETSAFARPGEECRHNLNYWTFGDYLGIGAGAHGKLSSFEGIVREMRHKHPGRYLDAA-KS 321

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQR-QGFIE 369
              V E+  +   +   EF+M  LRL  G+  + +    G  L  IE E    R QG +E
Sbjct: 322 REFVQERRTIGVTELPFEFMMNALRLSGGVPRRLFAERTGLPLAVIEDELKAAREQGLVE 381

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
            V    +R T+RG   L+ ++
Sbjct: 382 -VTPELIRPTERGRHFLNDLL 401


>gi|167580994|ref|ZP_02373868.1| coproporphyrinogen III oxidase [Burkholderia thailandensis TXDOH]
          Length = 405

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 122/340 (35%), Positives = 199/340 (58%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + ++
Sbjct: 29  LALYVHFPWCVRKCPYCDFNSH--EWKDGGALPEHDYLDALRADLEHALPLVWGRQVHTV 86

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S
Sbjct: 87  FIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLS 146

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ A
Sbjct: 147 IGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETA 206

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S
Sbjct: 207 LTFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQAGYARYEVS 262

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G A
Sbjct: 263 AYAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGAA 321

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V E+  +       EF++  LRL +G+    +    G +L
Sbjct: 322 VQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSL 361


>gi|329901885|ref|ZP_08272972.1| Radical SAM family enzyme, coproporphyrinogen III oxidase-like
           protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327548977|gb|EGF33594.1| Radical SAM family enzyme, coproporphyrinogen III oxidase-like
           protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 418

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 200/341 (58%), Gaps = 9/341 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH----VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H+P+CVKKCPYCDFNSH      +    +E ++ +   +++    L   R I +I
Sbjct: 41  LALYIHFPWCVKKCPYCDFNSHEVAGQSQSGFPEEAYLDAVRADLESALPLIWGRKIYTI 100

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +  ++  +     +    EIT+EANP + EV  F+ YR +G+NR+S
Sbjct: 101 FIGGGTPSLMSAAGLDRLMSDVRTLLPLDGAAEITMEANPGTFEVEKFRSYRASGINRLS 160

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS   + LR LGR H+  EA  A+ +A + F   + DL+YALP QT+ +   +++ A
Sbjct: 161 IGIQSFNGEHLRALGRIHDHDEARRAVDIAHSTFDNFNLDLMYALPSQTLAEATQDIRTA 220

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L YA  HLSLY LT+E  T+F K        LP ++++ D+ ++  + T A G   YE+S
Sbjct: 221 LGYAPPHLSLYHLTMEPNTVFAKFPP----ALPDDDLSADMQDMIAAETGAAGYGHYEVS 276

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++  G +S HNLNYW++GDY+G+G GAHS++      +  +  K P+S+++ + + G A
Sbjct: 277 AYAQPGRQSRHNLNYWQFGDYLGVGAGAHSKLSFPHRIIRQARFKQPKSYMENMAR-GSA 335

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           + E+  ++  +   EF++  LRL  G  V  +    G  L+
Sbjct: 336 IQEENEIARGELGFEFMLNTLRLTSGFQVNLFAERTGLGLN 376


>gi|269101810|ref|ZP_06154507.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161708|gb|EEZ40204.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 386

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/344 (39%), Positives = 199/344 (57%), Gaps = 15/344 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSISS 73
            L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + L ++           G R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHALKAEIPELDYIDALLDDLSTDLLAYHLEHGERKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P+ IA +L GI      S ++EIT+EANP +VE   FQ Y++AGVNRI
Sbjct: 66  IFIGGGTPSLISPEEIARLLQGIEARIPFSDDIEITMEANPGTVEAGRFQAYQQAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +++ L+ LGR H A EAI A  LA        + DL++ LP Q++     +L 
Sbjct: 126 SIGIQSFQDEKLKRLGRIHGAQEAITAAKLAAEAGLNSFNIDLMHGLPDQSINDALADLA 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  TLFY         LP ++   D++     + +  G   YE
Sbjct: 186 QAIGLNPPHLSWYQLTIEPNTLFYSQPP----TLPDDDDLWDIFEQGHKMLTYAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  +I+ KHP  +L   +  
Sbjct: 242 ISGYSKPGKQCQHNLNYWRFGDYLGIGCGSHGKISFDDGRIVRTIKVKHPRGYLNPEK-- 299

Query: 312 GHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             A +++E  ++++++  EF M   RL E    +D+    G  L
Sbjct: 300 --AYLDQETIVANDERPFEFFMNRFRLLEACPKQDFVARTGLPL 341


>gi|146284286|ref|YP_001174439.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri A1501]
 gi|145572491|gb|ABP81597.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas stutzeri A1501]
          Length = 392

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 220/394 (55%), Gaps = 15/394 (3%)

Query: 4   LSAYENNMTGQGS---NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++A     TGQG      L  YVH P+CV+KCPYCDFNSH     + +E ++ + L +++
Sbjct: 2   IAASPAPATGQGRFELPPLAAYVHIPWCVRKCPYCDFNSHTAGPALPEEAYVAALLADLR 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              +    R +SSIFFGGGTPSL   + +A I++G+      +  +EIT+EANP + E  
Sbjct: 62  ADLEHVQGRRLSSIFFGGGTPSLFSARALAAIVEGLEHLVGFADGIEITLEANPGTFEQA 121

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
            F+ YR+ G+NR+S+GVQS +   L+ LGR H+  EAI A  +AR   F   + DL++ L
Sbjct: 122 KFRDYRQLGINRLSIGVQSFQAAKLKALGRIHDGDEAIRAADMARAAGFENFNLDLMHGL 181

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++     +L+ A++    HLS YQLT+E  TLF+         LP +++  D+    
Sbjct: 182 PDQSLEDALSDLRTAIAQQPTHLSWYQLTLEPNTLFWSQPPQ----LPEDDILWDIQEAG 237

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE- 298
           Q++   HG   YE S ++  G ++ HNLNYW +GD++GIG GAH+++     R+  S + 
Sbjct: 238 QALLGEHGYRQYETSAYAQPGRQARHNLNYWTFGDFLGIGAGAHAKLSHADGRILRSWKT 297

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--I 356
           + P+ +L   +       EK+ L++++   EFLM  LRL +G+    +    G  LD   
Sbjct: 298 RLPKDYLDPAK--AFRAGEKQ-LTADELPFEFLMNVLRLTDGVPAVLFTQRTGLALDAIA 354

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +  R+ + +G +      RL  T +G   L+ ++
Sbjct: 355 KPRRDAEARGLLSN-DPDRLVATPKGQLFLNDLL 387


>gi|221201199|ref|ZP_03574239.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2M]
 gi|221206347|ref|ZP_03579360.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2]
 gi|221213627|ref|ZP_03586601.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD1]
 gi|221166416|gb|EED98888.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD1]
 gi|221173656|gb|EEE06090.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2]
 gi|221179049|gb|EEE11456.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2M]
          Length = 404

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/376 (34%), Positives = 209/376 (55%), Gaps = 11/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT  +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTFDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +       HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHRCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFMEQALA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           E+  + +     EF++  LRL EG  V  +    G  +    E  LQ   R+G I R  F
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFVERTGLPIST-IEPALQEAERRGLITR-DF 380

Query: 374 SRLRCTQRGMTMLDSV 389
           +R+  T  G   L+ +
Sbjct: 381 TRIAPTPLGQRFLNDL 396


>gi|50122553|ref|YP_051720.1| coproporphyrinogen III oxidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613079|emb|CAG76530.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pectobacterium atrosepticum SCRI1043]
          Length = 379

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 214/378 (56%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L G R++ SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLAGGRALHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPEEAKRAAQLATGLKLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGHILRTVKVRHPRGYMQ-----GTYM 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
            ++  ++++ +  EF M   RL E     D+    G    ++  + ++ L  QG++    
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPRADFTAYTGLEEHSIRPQLDQALA-QGYLTETA 355

Query: 373 FSRLRCTQRGMTMLDSVI 390
            +  + T+ G   L+S++
Sbjct: 356 -THWQITEHGKLFLNSLL 372


>gi|253990758|ref|YP_003042114.1| coproporphyrinogen III oxidase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639089|emb|CAR67701.1| Hypothetical protein yggW [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782208|emb|CAQ85372.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 376

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 196/335 (58%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L +++    +   R +++IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLKTDLPMVKGREVTTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q +  +LDG+     VS+  EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSSQGMQQLLDGVRTLLPVSTQAEITMEANPGTVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSPDKLVRLGRIHGPDEAKRAARLAASLGLRSFNLDLMHGLPNQSLNEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F         VLP ++   D+++    + +A G   YE S ++
Sbjct: 187 SPPHLSWYQLTIEPNTRFGSRPP----VLPDDDALWDIFSQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTVKTKHPRGYMQ-----GRYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           ++  + +E +  EF M   RL E +  +D+    G
Sbjct: 298 KQNQVENEDRPFEFFMNRFRLLEAMPKQDFSNFTG 332


>gi|90580279|ref|ZP_01236086.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
 gi|90438581|gb|EAS63765.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
          Length = 387

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 133/349 (38%), Positives = 196/349 (56%), Gaps = 25/349 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH  +  + + ++I + +    T++   + + G R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHALKTDLPELDYIDALIDDLETDLSAYQLINGARPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P  I  +L  I +    S ++EIT+EANP +VE   F+ Y +AGVNRI
Sbjct: 66  IFIGGGTPSLISPSEIGRLLKAIEQRIPFSDDIEITMEANPGTVEAGRFEAYSQAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS + + L  LGR H A EAI A  LA+       + DL++ LP Q++     +L+
Sbjct: 126 SIGIQSFQNEKLERLGRIHGADEAIRAAGLAKKAGLNSFNVDLMHGLPDQSVNDAISDLK 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  TL+Y         LP ++   D++     +    G   YE
Sbjct: 186 QAIALDPPHLSWYQLTIEPNTLYYSKPP----TLPDDDDLWDIFEQGHQLLKEAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +L+     
Sbjct: 242 ISGYSKQGKQCQHNLNYWRFGDYLGIGCGAHGKISFADGQIIRTVKVKHPRGYLQ----- 296

Query: 312 GHAVVEKEFLSSEQQ-AD-----EFLMMGLRLREGISVKDWEMLAGRNL 354
                +K +L+ E + AD     EF M   RL E    +D+    G  L
Sbjct: 297 ----ADKPYLTQENKVADGERPFEFFMNRFRLLESCPKQDFVARTGLAL 341


>gi|26991777|ref|NP_747202.1| coproporphyrinogen III oxidase [Pseudomonas putida KT2440]
 gi|24986887|gb|AAN70666.1|AE016710_11 oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas putida KT2440]
          Length = 391

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 211/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSASALGRLLRGVEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLEALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+    +    LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMAEHGYRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+  + + + P+ +L + +      
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKP---FR 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L    E  R  +++G ++ V+ 
Sbjct: 311 AGEKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLAQLQEARRAAEQKGLLQ-VEP 369

Query: 374 SRLRCTQRGMTMLDSVI 390
            RL  T RG   L+ ++
Sbjct: 370 DRLVATPRGQLFLNDLL 386


>gi|313501077|gb|ADR62443.1| Coproporphyrinogen III oxidase [Pseudomonas putida BIRD-1]
          Length = 388

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 211/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 15  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 74

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 75  GGTPSLFSASALGRLLRGVEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 134

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 135 QSFQPAKLEALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 194

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+    +    LP +++  D+    Q++ + HG   YE+S +
Sbjct: 195 LGPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMAEHGYRQYEVSAY 250

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+  + + + P+ +L + +      
Sbjct: 251 AQAGRAAQHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKP---FR 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L    E  R  +++G ++ V+ 
Sbjct: 308 AGEKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLSQLQEARRAAEQKGLLQ-VEP 366

Query: 374 SRLRCTQRGMTMLDSVI 390
            RL  T RG   L+ ++
Sbjct: 367 DRLVATPRGQLFLNDLL 383


>gi|254252977|ref|ZP_04946295.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
 gi|124895586|gb|EAY69466.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
          Length = 404

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 211/376 (56%), Gaps = 11/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  + +++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPESDYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT  +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTFDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNRQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPAAFIEHAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           E+  + +     EF++  LRL +G  V  +    G  +    E  LQ   R+G I R  F
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVDGFPVHSFIERTGLPMST-IEPALQEAERRGLIVR-DF 380

Query: 374 SRLRCTQRGMTMLDSV 389
           +R+  T  G   L+ +
Sbjct: 381 TRIAPTPLGQRFLNDL 396


>gi|332305441|ref|YP_004433292.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172770|gb|AEE22024.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 407

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 201/341 (58%), Gaps = 11/341 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +Y+H P+CV+KCPYCDFNSH  ++  + +  ++   L ++    QL G R++ SIF G
Sbjct: 31  VSLYIHIPWCVQKCPYCDFNSHGQKQATLPEAEYVSHLLDDLAHDAQLIGDRAVHSIFIG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I  +L G+ +   ++++ EIT+EANP +VE   F+G+ KAGVNRIS+GV
Sbjct: 91  GGTPSLFSPEAIGRLLSGVRQRVNLAADAEITLEANPGTVESERFKGFAKAGVNRISIGV 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H+  +A+ A   AR+      + DL++ LP+Q++     +L++ + 
Sbjct: 151 QSFQQEKLERLGRIHDEQQALNAASYARDAGLNSFNLDLMHGLPEQSIEDALFDLRQGID 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F+         LP +++  D+      +  A G   YEIS +
Sbjct: 211 QQPPHLSWYQLTIEPNTQFHSKPP----TLPEDDILWDIQEQGHDMLIAAGYEQYEISGY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIE-KHPESWLKMVRKNGHA 314
           S  G +  HNLNYWR+GDY+GIG GAH ++ +  + ++  +++ KHP+ ++ + R   H 
Sbjct: 267 SLAGQQCRHNLNYWRFGDYLGIGCGAHGKITMKDTGQILRTVKVKHPKGYMDLTRPYLH- 325

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             ++  +  E+   EF M  LRL E    +D+    G  L+
Sbjct: 326 --QQHNVQDEELPFEFFMNRLRLLEPCPKQDFTDFTGLKLE 364


>gi|261868181|ref|YP_003256103.1| coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413513|gb|ACX82884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 389

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 202/344 (58%), Gaps = 17/344 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + +++++Q  L ++       ++    R + S
Sbjct: 13  PLSLYVHIPWCVQKCPYCDFNSHAQKGVIPEQDYVQHLLADLTADLARYQESVQQRPLHS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL  P  IA +L  I ++   + N+EIT+EANP + E   F+GY +AGVNRI
Sbjct: 73  IFIGGGTPSLFSPDTIAYLLAQIEQHIPFAPNIEITLEANPGTAEAARFRGYVQAGVNRI 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  ++ L+ LGR HNA EA +A+  A     R  + DL++ LP QT+ +   +L+
Sbjct: 133 SMGIQSFSDEKLQKLGRIHNAEEAKSAVGFAGVSHLRSFNLDLMHGLPNQTLNEALDDLR 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +A+  A  HLS YQLTIE  T+F Y+        LP ++   D++     + +A G   Y
Sbjct: 193 QAIVLAPPHLSWYQLTIEPNTMFAYR-----PPTLPDDDELWDIFEQGHQLLTAAGYQQY 247

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRK 310
           E S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++    
Sbjct: 248 ETSAYAKAGFQCQHNLNYWRFGDYLAIGCGAHGKLSFPNGNILRYSKTKHPKGYMR---- 303

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            G  + E++ +S + +  EF M   RL E +   D+E L G  L
Sbjct: 304 -GEYLYEEQQVSVKDRPFEFFMNRFRLLEPVPKSDFEQLTGLPL 346


>gi|300718250|ref|YP_003743053.1| coproporphyrinogen III oxidase [Erwinia billingiae Eb661]
 gi|299064086|emb|CAX61206.1| coproporphyrinogen III oxidase [Erwinia billingiae Eb661]
          Length = 382

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/377 (35%), Positives = 209/377 (55%), Gaps = 20/377 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + ++Q  L ++     LT  R +S+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVQHLLADLDADLHLTSGREVSTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + + ++LDG+     +S+  EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSSEAMQMLLDGVRARLPLSATAEITMEANPGAVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSAQKLERLGRIHGPEEAKRAAQLATDLNLRSFNLDLMHGLPDQSLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFASRPPK----LPDDDALWDIFEQGDRLLTAAGYVQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G    HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  ++      G  + 
Sbjct: 243 KPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQNDGRIIRTTKTRHPRGFMA-----GKYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ-----RQGFIERV 371
            ++ +S   +  EF M   RL E     ++ +  G +   EC    Q      +G++   
Sbjct: 298 RQQEVSDSDKPFEFFMNRFRLLEAAPRAEYPLYTGLD---ECSIRPQIDRALSEGYLTET 354

Query: 372 QFSRLRCTQRGMTMLDS 388
             S  + T++G   L+S
Sbjct: 355 AES-WQVTEKGKLFLNS 370


>gi|261822849|ref|YP_003260955.1| coproporphyrinogen III oxidase [Pectobacterium wasabiae WPP163]
 gi|261606862|gb|ACX89348.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           wasabiae WPP163]
          Length = 379

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 193/335 (57%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFDAQKLTRLGRIHGPDEAKRAAQLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTVKVRHPRGYMQ-----GTYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           ++  ++++ +  EF M   RL E     D+    G
Sbjct: 298 KQHDVANDDRPFEFFMNRFRLLEAAPRADFTAYTG 332


>gi|170719551|ref|YP_001747239.1| coproporphyrinogen III oxidase [Pseudomonas putida W619]
 gi|169757554|gb|ACA70870.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida W619]
          Length = 395

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 211/379 (55%), Gaps = 16/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + LT++         R ISSIFFG
Sbjct: 22  PLALYIHIPWCVRKCPYCDFNSHAAGPDLPEEAYVDALLTDLDQELPAVQGRPISSIFFG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +      ++EIT+EANP + E   F+ YR+ G+NR+S+GV
Sbjct: 82  GGTPSLFSANALGRLLRGVEQRIPFEPDIEITLEANPGTFEQEKFKAYRQTGINRLSIGV 141

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 142 QSFQPAKLQALGRIHNGDEAIRAAGMARAAGFDNFNMDLMHGLPDQSLNDALGDLRQAID 201

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+    +    LP +++  D+    Q++ +AHG   YE+S +
Sbjct: 202 LGPTHLSWYQLTVEPNTVFWNQPPE----LPEDDILWDIQEAGQALMAAHGYKQYEVSAY 257

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR--KNGH 313
           +  G  + HNLNYW +GD+IGIG GAH +      R+  + + + P+ +L + +  K G 
Sbjct: 258 AQPGRAAKHNLNYWCFGDFIGIGAGAHGKQTFADGRILRTWKTRLPKDYLNLAKPFKAG- 316

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERV 371
               ++ L  ++   EFLM  LRL +G+  + +    G  L    E  R  +++G ++ V
Sbjct: 317 ----EKLLPVDELPFEFLMNALRLTDGVEAELFSQRTGLPLVQLAEARRAAEQKGLLQ-V 371

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  RL  T RG   L+ ++
Sbjct: 372 EPDRLVATPRGQLFLNDLL 390


>gi|262172431|ref|ZP_06040109.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
 gi|261893507|gb|EEY39493.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
          Length = 378

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 189/335 (56%), Gaps = 11/335 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISSIFFGGGTPSLI 84
           ++KCPYCDFNSH ++  + ++ ++ + L ++       QL G PR + SIF GGGTPSLI
Sbjct: 1   MQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHSIFIGGGTPSLI 60

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV RIS+GVQS + + 
Sbjct: 61  SAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFDPEK 120

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A++    HLS
Sbjct: 121 LVRLGRIHGQQEAVRAAQLAHQIGLTSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLS 180

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS +S  G + 
Sbjct: 181 WYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHKKLSDAGYVQYEISGYSKPGYQC 236

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLS 322
            HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     A ++ E L 
Sbjct: 237 QHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSEQLV 296

Query: 323 SEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
           ++Q    EF M   RL E     D+    G  +++
Sbjct: 297 ADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEV 331


>gi|222054203|ref|YP_002536565.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           FRC-32]
 gi|221563492|gb|ACM19464.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           FRC-32]
          Length = 387

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 127/327 (38%), Positives = 198/327 (60%), Gaps = 3/327 (0%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGG 79
           +Y+H+PFC+KKC YCDF+S V    V  + ++ + + EM+    +L  P S  +++FGGG
Sbjct: 11  LYIHFPFCLKKCLYCDFDS-VAGSLVSPDEYVAAVVREMELRAAKLAAPVSAPTLYFGGG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ PQ +  I+D  A+ + ++S+ EITIEANP +V      GYR AG+NR+SLGVQ+
Sbjct: 70  TPSLMAPQLVGRIIDTAARLYGLNSDGEITIEANPGTVTAEKLAGYRAAGINRLSLGVQA 129

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  L+ LGR H+  E++AA   AR + F  +  DLI++LP Q++T WE  L  A+   
Sbjct: 130 LDDALLQQLGRVHSVEESLAAYKAARKVGFDNIGIDLIHSLPGQSLTMWEKALDEAIRLG 189

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L++E+GT F  M + GDL LP E+ A  ++  T+ + + HG   YEISN + 
Sbjct: 190 PEHISAYSLSVEEGTPFAAMFEAGDLSLPHEDEATAMFEATRYLLALHGYEHYEISNFAR 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN  YWR G+Y+G G GAHS ++     +     ++  ++L  ++++     E 
Sbjct: 250 PLFRSRHNQVYWRRGNYLGFGAGAHSFLREPGWGLRWVNPRNHTAYLAAMQQDHLQEEEL 309

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKD 345
           + L+      E   +GLRL +GI + D
Sbjct: 310 QQLARRDALAEVFFLGLRLLKGIDMLD 336


>gi|301169184|emb|CBW28781.1| predicted oxidoreductase [Haemophilus influenzae 10810]
          Length = 383

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 200/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +A G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|239995547|ref|ZP_04716071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas macleodii ATCC 27126]
          Length = 379

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/381 (34%), Positives = 211/381 (55%), Gaps = 18/381 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  + ++ ++   L ++    +    R + +IF GG
Sbjct: 6   LSLYIHIPWCVQKCPYCDFNSHGLKSDLPEKEYVAHLLDDLAIDAKRIADRPVETIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   + +A IL G+ +   +S   EIT+EANP +VE   F G+ +AG+NRIS+G+Q
Sbjct: 66  GTPSLFSSEAMADILKGVKQRVNLSDTAEITMEANPGTVEAGKFAGFYQAGINRISVGIQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + + L+ LGR HN S+A  A+  A +   P  + DL++ LP+Q++     +L++ +  
Sbjct: 126 SFQPKHLKVLGRIHNESQAENAVKQAHSAGLPTFNLDLMHGLPEQSVENAMGDLKQGIEL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T FY    +    LP +++  ++     S+    G H YEIS ++
Sbjct: 186 DPYHLSWYQLTIEPNTPFYSKPPE----LPDDDILWEIQEKGHSLLERAGYHQYEISGYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS----HRVAISIEKHPESWLKMVRKNGH 313
             G +  HNLNYWR+GDY+GIG GAH ++   +    HR      KHP  +++M R    
Sbjct: 242 KAGHQCRHNLNYWRFGDYLGIGCGAHGKITDAANGTIHRTVKV--KHPRGYMEMSRP--- 296

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
            +  +  +S++    EF M   RL E   + D+    G  L  + +R L     QG +  
Sbjct: 297 YLDTQTLVSADDLPFEFFMNRFRLVEPCPMSDFSDFTGTELTDDVKRALSDAHHQGLLS- 355

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
           +  S  + T +G   L+S+++
Sbjct: 356 ISDSHWQVTAKGRRYLNSLLS 376


>gi|212709351|ref|ZP_03317479.1| hypothetical protein PROVALCAL_00387 [Providencia alcalifaciens DSM
           30120]
 gi|212688263|gb|EEB47791.1| hypothetical protein PROVALCAL_00387 [Providencia alcalifaciens DSM
           30120]
          Length = 379

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 197/335 (58%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + ++ Q  +++  L ++    +L G R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHTLKGEIPQTEYVEHLLNDLDKDAELIGSRPVKTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++ +++DG+ +   +  N E+T+EANP +VE + F GY+ +G+NRIS+GVQ
Sbjct: 67  GTPSLLSAESMQMLMDGVRQRVNLDPNAEVTMEANPGTVEADRFSGYQTSGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H  +EA  A  LA N+  R  + DL++ LP QT  +   +L++A+  
Sbjct: 127 SFGDDKLIMLGRIHGPNEAKRAAQLATNLHLRSFNLDLMHGLPSQTRDEGLSDLRQAIEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F          LP ++   D+Y     + +A G   YE S ++
Sbjct: 187 SPPHLSWYQLTIEPNTQFGSRPPR----LPDDDTLWDIYTEGHKLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +++     G  + 
Sbjct: 243 KAGYQCEHNLNYWRFGDYLGIGCGAHGKITSTDGQILRTVKTKHPRGYME-----GRYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +  + +E +  E+ M   RL E ++ +++    G
Sbjct: 298 NRYNVENEDRPFEYFMNRFRLLEAMTRREFTEYTG 332


>gi|296113214|ref|YP_003627152.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis RH4]
 gi|295920908|gb|ADG61259.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis RH4]
 gi|326560207|gb|EGE10595.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 7169]
 gi|326562766|gb|EGE13062.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 103P14B1]
 gi|326564945|gb|EGE15147.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 46P47B1]
 gi|326567876|gb|EGE17977.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 12P80B1]
 gi|326573317|gb|EGE23285.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 101P30B1]
 gi|326575787|gb|EGE25710.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis CO72]
 gi|326576867|gb|EGE26773.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis O35E]
          Length = 391

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 135/362 (37%), Positives = 201/362 (55%), Gaps = 18/362 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CVKKCPYCDFNSH    +V  EN+I++ L++    + L   R I ++F G
Sbjct: 12  PLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVFIG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  ++   + DG+   +  +   EIT+EANP ++E + F  Y   G+NR+S+GV
Sbjct: 72  GGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +  +L  LGR HN  +A  AI  AR   F R++ DL+Y LP Q  ++   ++Q A+ 
Sbjct: 132 QSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAID 191

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN- 255
               HLS YQLTIE  T FY         LP E +  ++  L QS+ + HG + YE+S  
Sbjct: 192 AGATHLSWYQLTIEPNTTFYCTPPQ----LPDEEIMAEIETLGQSVLTKHGFYNYEVSAW 247

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR------VAISIEKHPESWLKMVR 309
           H    A   HNLNYW++GDY+ IG GAH ++ + +H             + P+ +L    
Sbjct: 248 HGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAF-- 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQG 366
           ++   +V  E +S +    EF+M  LRL++G+S   +E   G     +D E    LQ QG
Sbjct: 306 EDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEM-LPLQHQG 364

Query: 367 FI 368
            +
Sbjct: 365 LM 366


>gi|325524720|gb|EGD02707.1| coproporphyrinogen III oxidase [Burkholderia sp. TJI49]
          Length = 404

 Score =  242 bits (617), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 210/375 (56%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPISTIEPALKEAERRGLIAR-DFA 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|291550851|emb|CBL27113.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus torques L2-14]
          Length = 385

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 219/384 (57%), Gaps = 13/384 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFCV+KC YCDF S     +  Q  ++ + + E+Q  ++L+G   + +IF G
Sbjct: 5   NLELYLHIPFCVRKCNYCDFFS-ASGTEEEQAAYVSAMVQEIQSYQELSGEYEVQTIFLG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ I  I + I   ++V+ N EIT+E NP +V++      + AGVNR+S+G+
Sbjct: 64  GGTPSLLTPEQIEQIFNAIYHTFSVNENAEITMEMNPGTVDIEKLHAMKAAGVNRLSIGL 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L+ LGR H   E +    L     F   + DL+ ALP QT+  +E  L + L+
Sbjct: 124 QSAQNEELKMLGRIHTFEEFLETWKLIEQAGFKNRNIDLMSALPGQTIESYEDTLSKVLA 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-----VLPSENVAVDLYNLTQSITSAHGLHAY 251
              +H+S Y L +E+GT+FY  ++ G L      LPSE     +  LT    +  G++ Y
Sbjct: 184 LEPEHISAYSLILEEGTVFYDWYEKGKLDRGAWKLPSEEEEYAMGELTILRLAEAGMYRY 243

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G E  HNL YW   +Y+GIG G+ S +K G     I   K   ++++ +R  
Sbjct: 244 EISNYAKPGKECRHNLGYWDRVEYLGIGAGSSSLIK-GERFDHIRDRK---AYIEKIRNG 299

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              ++++E LS E Q +EF+ +GLR  EG+S  D++   G+N+D    + L +    + +
Sbjct: 300 ESILIDREILSVESQMEEFMYLGLRKVEGVSRTDFQNCFGKNVDDVYGKILDKLEEEQLL 359

Query: 372 QFS--RLRCTQRGMTMLDSVIANL 393
           +FS  R+R T RGM + + V+A  
Sbjct: 360 EFSGDRIRLTHRGMDVSNCVLAEF 383


>gi|148827660|ref|YP_001292413.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittGG]
 gi|148718902|gb|ABR00030.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittGG]
          Length = 383

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGVQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|317049431|ref|YP_004117079.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
 gi|316951048|gb|ADU70523.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
          Length = 379

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 194/331 (58%), Gaps = 11/331 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    LT  R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHIEYVQHLLHDLEQDLPLTSGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+     ++++ EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSNAMQMLMDGVRARLPLAADAEITMEANPGTVEADRFSGYQQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLERLGRIHGPEEAQRAAHLAAGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LHPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKTRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            ++  ++   +  EF M   RL E     D+
Sbjct: 297 DKQHDVADADKPFEFFMNRFRLLEAAPRADF 327


>gi|319898018|ref|YP_004136215.1| fe-s oxidoreductase [Haemophilus influenzae F3031]
 gi|317433524|emb|CBY81907.1| predicted Fe-S oxidoreductase [Haemophilus influenzae F3031]
          Length = 383

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 200/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKISGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +A G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG G+H ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGSHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|260582271|ref|ZP_05850064.1| coproporphyrinogen III oxidase [Haemophilus influenzae NT127]
 gi|260094639|gb|EEW78534.1| coproporphyrinogen III oxidase [Haemophilus influenzae NT127]
          Length = 383

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 200/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    ++ EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRSFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|78484462|ref|YP_390387.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thiomicrospira crunogena XCL-2]
 gi|78362748|gb|ABB40713.1| coproporphyrinogen III oxidase, anaerobic [Thiomicrospira crunogena
           XCL-2]
          Length = 382

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 215/378 (56%), Gaps = 13/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH+P+C++KCPYCDFNSH    +  ++ +IQ+ + +++        R I SIFFG
Sbjct: 8   PLSLYVHYPWCIQKCPYCDFNSHTLG-EDQEQRYIQALIRQLEQTLPDIWGRPIQSIFFG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + + L           ++EIT+EANP +V+   F G+R+AG+NR+S+G+
Sbjct: 67  GGTPSLMSEAGLDMFLSQARALLGFQPDIEITLEANPGTVDFEKFSGFRQAGINRLSMGI 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ LR LGR H++ EA  A+  AR+  F   + DL++ALP QT+ Q   +++ AL+
Sbjct: 127 QSFDDEKLRDLGRIHSSDEAYKAVEAARSAGFDNFNLDLMFALPSQTLKQAIHDVETALA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T FYK       VLP E++A ++    Q++ S  G H YE+S +
Sbjct: 187 LEPTHISHYQLTLEPNTPFYK----NPPVLPEEDLAWEMQLACQTVLSETGYHHYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +       HNLNYW++GDYIG+G GAH ++            +   P  ++ M+      
Sbjct: 243 AKKNQACRHNLNYWQFGDYIGLGAGAHGKITQPPLGEIWRTQMPASPGGYMNMIESGDMG 302

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
              +  LS +    EF++  LRL++G  +  + +  G  L +     +++  +G+ E+ Q
Sbjct: 303 --RRHILSDDDALFEFMLNALRLQDGFPLALFTVRTGLPLQVIDPQLKSMISKGWAEQDQ 360

Query: 373 FSRLRCTQRGMTMLDSVI 390
              L+ TQ G T L+ V+
Sbjct: 361 -DNLQLTQTGKTYLNEVL 377


>gi|298485015|ref|ZP_07003112.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298160425|gb|EFI01449.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 404

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 211/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L  V+      
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSNPDGRIMRTWKTRLPKDYLNPVKP---FQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|197334831|ref|YP_002155180.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           fischeri MJ11]
 gi|197316321|gb|ACH65768.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           fischeri MJ11]
          Length = 386

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 194/344 (56%), Gaps = 13/344 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
            L +Y+H P+C++KCPYCDFNSH  + ++ +  +I + +    T++      + PR + S
Sbjct: 6   PLSLYIHIPWCIQKCPYCDFNSHALKAEIPEAQYISALIDDLDTDLARYDMQSEPRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI    I  +L  + K    + ++EIT+EANP +VE   F  YR+AGVNRI
Sbjct: 66  IFIGGGTPSLITGPEIKRLLSEVEKRLPFADDIEITMEANPGTVEAGRFVEYRQAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +++ L  LGR H   EAI A HLA        + DL++ LP Q++     +LQ
Sbjct: 126 SIGVQSFQQEKLEKLGRIHGKDEAIRAAHLAHEAQLNSFNLDLMHGLPNQSIEDALSDLQ 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++     + +  G   YE
Sbjct: 186 QAIDLNPPHLSWYQLTIEPNTVFYYKPP----TLPDDDDLWDIFEQGHQMLAKAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S +G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L + +  
Sbjct: 242 ISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKIKHPRGFLDLTKP- 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            + + E+E +  ++   EF M   RL E    +D+    G   D
Sbjct: 301 -YLIDEQEVMDHDRPF-EFFMNRFRLLEACPKQDFIDKTGLGFD 342


>gi|302186237|ref|ZP_07262910.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           642]
          Length = 404

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L +A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLHQAIT 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +AHG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQEAGQQLLAAHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|297272555|ref|XP_001093983.2| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial [Macaca mulatta]
          Length = 420

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 195/331 (58%), Gaps = 6/331 (1%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
            WP+C K+C YC+FN ++ R  V +    +  +TE Q + +L+G + + S+FFGGGTPSL
Sbjct: 23  QWPYCEKRCSYCNFNKYIPR-GVEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGTPSL 81

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL+  
Sbjct: 82  ASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSTPGSRLAEFGAAGVNRLSIGLQSLDNT 141

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  DHL
Sbjct: 142 ELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCDDHL 201

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN +  GA 
Sbjct: 202 SLYQLSLERGTALFAQVQQGVLPAPDPELAAEMYQRGRAVLREAGFRQYEVSNFARNGAL 261

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEK 318
           S HN  YW+ G Y+GIGPGAH R      GSH     I+   P++W+K V   GH   ++
Sbjct: 262 STHNWTYWQCGQYLGIGPGAHGRFMPQGAGSHTREARIQTLEPDNWMKEVMMFGHGTRKR 321

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             L   +  +E L +GLR   GI+ + W+  
Sbjct: 322 VPLGRLELLEEVLALGLRTDVGITHQHWQQF 352


>gi|257453736|ref|ZP_05619017.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enhydrobacter aerosaccus SK60]
 gi|257448828|gb|EEV23790.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enhydrobacter aerosaccus SK60]
          Length = 382

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 204/378 (53%), Gaps = 15/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CVKKCPYCDFNSH  R  +    ++ + L +++        R IS+IF G
Sbjct: 8   PLSLYIHIPWCVKKCPYCDFNSHESRTPIDFVGYVDALLDDLKSQLSFVQGRKISTIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +  GI    T++ + EIT+EANP++VE   F  Y   G+NR+SLGV
Sbjct: 68  GGTPSLLPIAQYQQLFAGINAQLTLTEDCEITMEANPATVEHAPFHEYLAVGINRLSLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR HN  +A+ AI  A+   F +++ DL++ LP QT+T    +LQ+A+ 
Sbjct: 128 QSFQAQKLAALGRIHNPQQALFAIQNAQQAGFKKLNVDLMHGLPNQTLTDALSDLQQAID 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H+S YQLTIE  T+FY+       +LP + + VD++     +  A+G   YE+S  
Sbjct: 188 LGVSHISWYQLTIEPNTVFYR----NTPILPDDEILVDIFEQGAELLQANGFVQYEVSAW 243

Query: 257 SFLG--AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           S       S HNLNYW++GDY+ IG GAH +V         S  + P+ +     +   A
Sbjct: 244 SRQADFQPSQHNLNYWQFGDYLAIGAGAHGKVTRPDGIYRFSKSRLPKDY-----RVNQA 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQ 372
            +  + +       EF+M GLRL+ G+  + W    G    +   +   L  +G +E + 
Sbjct: 299 AIGWQAIEPSDLPFEFMMNGLRLKNGVPKQFWTQRTGLAWSVIEPQLIQLHNRGLVE-LS 357

Query: 373 FSRLRCTQRGMTMLDSVI 390
              + CT +G   L+ V+
Sbjct: 358 GDHIHCTAQGFLFLNQVL 375


>gi|15603534|ref|NP_246608.1| coproporphyrinogen III oxidase [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12722075|gb|AAK03753.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 384

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 132/355 (37%), Positives = 203/355 (57%), Gaps = 22/355 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL----TGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++   RQ        RS+ S
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHAQKGHIPEQDYIAHLLQDLHQDRQRFQDSIQDRSLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L G+A+      ++EIT+EANP + E   F+GY +AGV RI
Sbjct: 68  IFIGGGTPSLFSAEGIHTLLSGVAQCLPFQPDIEITLEANPGTAEAERFKGYVQAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L  LGR HNA EA +A+  A+ +     + DL++ LP QT+ +   +LQ
Sbjct: 128 SMGIQSFNDDKLVRLGRIHNAQEAKSAVGFAKLSGLKSFNLDLMHGLPNQTLEEALSDLQ 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +A++    HLS YQLTIE  T+F Y+       VLP ++   D++     + +  G   Y
Sbjct: 188 QAIALEPPHLSWYQLTIEPNTMFAYR-----PPVLPDDDALWDIFEQGHQLLTEAGYVQY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRK 310
           E S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++    
Sbjct: 243 ETSAYAKPAFQCRHNLNYWRFGDYLAIGCGAHGKITQPNGEIKRYSKTKHPKGYMR---- 298

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
            G  + E++ +++E  A EF M   RL E +   D+  L G      CE ++Q Q
Sbjct: 299 -GDYLYEEKTVATEDLAFEFFMNRFRLLEAVPKTDFTRLTGL-----CEESIQPQ 347


>gi|319775609|ref|YP_004138097.1| Fe-S oxidoreductase [Haemophilus influenzae F3047]
 gi|329122343|ref|ZP_08250930.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           aegyptius ATCC 11116]
 gi|317450200|emb|CBY86416.1| predicted Fe-S oxidoreductase [Haemophilus influenzae F3047]
 gi|327473625|gb|EGF19044.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           aegyptius ATCC 11116]
          Length = 383

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDAIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|59711031|ref|YP_203807.1| coproporphyrinogen III oxidase [Vibrio fischeri ES114]
 gi|59479132|gb|AAW84919.1| predicted oxidoreductase [Vibrio fischeri ES114]
          Length = 386

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 13/344 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
            L +Y+H P+C++KCPYCDFNSH  + ++ +  +I + +    T++      + PR + S
Sbjct: 6   PLSLYIHIPWCIQKCPYCDFNSHALKAEIPEAQYISALIDDLDTDLARYDMQSEPRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI    I  +L  + K    + ++EIT+EANP +VE   F  YR+AGVNRI
Sbjct: 66  IFIGGGTPSLITAPEIKRLLSEVEKRLPFAGDIEITMEANPGTVEAGRFVKYRQAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +++ L  LGR H   EAI A HLA        + DL++ LP Q++     +LQ
Sbjct: 126 SIGVQSFQQEKLEKLGRIHGKDEAIRAAHLAHEAQLNSFNLDLMHGLPNQSIEDALSDLQ 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++     + +  G   YE
Sbjct: 186 QAIDLNPPHLSWYQLTIEPNTVFYYKPP----TLPDDDDLWDIFEQGHQMLAKAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S +G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L + +  
Sbjct: 242 ISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKIKHPRGFLDLTKP- 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            + + E+E +  ++   EF M   RL E    +++    G   D
Sbjct: 301 -YLIDEQEVMDHDRPF-EFFMNRFRLLEACPKQEFLDTTGLGFD 342


>gi|71735003|ref|YP_272765.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555556|gb|AAZ34767.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 404

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 211/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAHS++     R+  + + + P+ +L   +      
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHSKLSHPDGRIMRTWKTRLPKDYLNPDKPFQAGA 326

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 327 ---KLLPLDELPFEFLMNALRLTNGVDAALFRKRTGLSLDSLTEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|330899343|gb|EGH30762.1| HemN family oxidoreductase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 404

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|90412034|ref|ZP_01220041.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
 gi|90327012|gb|EAS43391.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
          Length = 384

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/358 (38%), Positives = 196/358 (54%), Gaps = 26/358 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQL-TGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + L ++       QL  G R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHALKAEIPELDYIDALLEDLDIDLAKYQLEAGVRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI P  I  +L GI      S ++EIT+EANP +VE   F  Y++ G+NRI
Sbjct: 66  IFIGGGTPSLISPPEIGRLLKGIEARIPFSHDIEITMEANPGTVEAGRFVAYQEVGINRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +++ L  LGR H + EA  A  LA        + DL++ LP Q++     +L+
Sbjct: 126 SIGVQSFQDEKLTRLGRIHGSDEARKAAKLATEAGLNSFNIDLMHGLPDQSIDDAMYDLK 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T+FY         LP ++   D++     I +  G   YE
Sbjct: 186 QAIALNPPHLSWYQLTIEPNTMFYSKPP----TLPDDDDLWDIFEQGHQILADAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S  G +  HNLNYWR+GDY+GIG GAH +V      +  +++ KHP  +L      
Sbjct: 242 ISGYSKPGLQCRHNLNYWRFGDYLGIGCGAHGKVSFADGNITRTVKVKHPRGYLNPT--- 298

Query: 312 GHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
                 K +L  E Q D      EF M   RL E    +D+    G +LD   + N+Q
Sbjct: 299 ------KPYLDKETQVDAAERPFEFFMNRFRLLEACPKQDYMDRTGLSLDT-IDTNIQ 349


>gi|329296968|ref|ZP_08254304.1| HemN family oxidoreductase [Plautia stali symbiont]
          Length = 376

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/336 (37%), Positives = 193/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L ++     L+  R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHGEYVQHLLNDLDQDLPLSAGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  ++DG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQQLMDGVRARLPLAMDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLTRLGRIHGPDEARRAAQLAAGLGLRSFNLDLMHGLPDQSLEEAPDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GA+ ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAYGKLTQPDGRIVRTVKTRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  +  E +  EF M   RL E     D++   G
Sbjct: 297 DKQHDVPDEDKPFEFFMNRFRLLEAAPRADFQRYTG 332


>gi|237798168|ref|ZP_04586629.1| HemN family oxidoreductase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021020|gb|EGI01077.1| HemN family oxidoreductase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 404

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 209/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYDRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHEDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           SRL  T +G   L+ ++
Sbjct: 383 SRLIATPQGQLFLNDLL 399


>gi|223041937|ref|ZP_03612122.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus minor 202]
 gi|223017291|gb|EEF15718.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus minor 202]
          Length = 385

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/389 (34%), Positives = 208/389 (53%), Gaps = 23/389 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L ++       ++  G R I SI
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEKEYIQHLLADLSQDLTAYQKAIGERKIHSI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + I  +L  + K       +EIT+EANP + E   F GY + GVNRIS
Sbjct: 68  FIGGGTPSLFSAEGIQYLLAEVQKRIAFEDQIEITLEANPGTAEAERFLGYVQGGVNRIS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEME 190
           +G+QS E + L  LGR HN  EAI A+  A+N         + DL++ LP Q+++Q   +
Sbjct: 128 MGIQSFEPEKLLKLGRIHNREEAIQAVEFAKNAASLGLRSFNLDLMHGLPNQSVSQALSD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+     HLS YQLTIE  T+FY         LP ++   D++     + ++ G   
Sbjct: 188 LKQAIVLNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTSAGYEQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YE S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 244 YETSAYAKKDYQCQHNLNYWRFGDYLAIGCGAHGKITYPTGEIYRFSKTKHPKGYMR--- 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQG 366
             G     +E ++ E +  EF M   RL E     D+E L G   ++++    + +++  
Sbjct: 301 --GEYRYSQELIALEDRPFEFFMNRFRLLEATPKTDFEQLTGLTIKSIEPIISQAIEKNY 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             E  Q    + TQ G   L+ ++    V
Sbjct: 359 LTETTQ--HWQITQHGKLFLNELLEGFLV 385


>gi|251794011|ref|YP_003008743.1| coproporphyrinogen III oxidase [Aggregatibacter aphrophilus NJ8700]
 gi|247535410|gb|ACS98656.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter aphrophilus NJ8700]
          Length = 384

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 203/345 (58%), Gaps = 19/345 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ----SFLTEMQWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++++      + ++   ++    R + S
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHAQKGAIPEQDYVRHLIADLMADLAHYQESVQQRPLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL     IA +L  I +    + N+EIT+EANP +VE   F GY +AGVNRI
Sbjct: 68  IFIGGGTPSLFSADTIAYLLQQIEQRIPFAPNIEITLEANPGTVEAERFLGYAQAGVNRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
           S+G+QS  ++ L+ LGR HNA+EA +A+ LA ++ P  SF  DL++ LP QT+ +   +L
Sbjct: 128 SMGIQSFSDEKLQKLGRIHNAAEAKSAVKLA-SVSPLRSFNLDLMHGLPNQTLNEALDDL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++A+  A  HLS YQLTIE  T+F Y+  K     LP ++   D++     + +A G   
Sbjct: 187 RQAIELAPPHLSWYQLTIEPNTMFAYRPPK-----LPDDDELWDIFEQGHQLLTAAGYQQ 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVR 309
           YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 242 YETSAYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLSFQNGNILRYSKTKHPKGYMR--- 298

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             G    E+  +S + +  EF M   RL E +   ++E   G  L
Sbjct: 299 --GEYRYEEREVSVQDRPFEFFMNRFRLLEAVPKIEFEQFTGLPL 341


>gi|145634540|ref|ZP_01790249.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittAA]
 gi|145268085|gb|EDK08080.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittAA]
          Length = 383

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|229844377|ref|ZP_04464517.1| coproporphyrinogen III oxidase [Haemophilus influenzae 6P18H1]
 gi|229812626|gb|EEP48315.1| coproporphyrinogen III oxidase [Haemophilus influenzae 6P18H1]
          Length = 383

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|170698510|ref|ZP_02889581.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
 gi|170136594|gb|EDT04851.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
          Length = 404

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 208/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSASGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|242238222|ref|YP_002986403.1| coproporphyrinogen III oxidase [Dickeya dadantii Ech703]
 gi|242130279|gb|ACS84581.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech703]
          Length = 378

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 208/384 (54%), Gaps = 30/384 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH  +  V  + ++   L ++     L G R + SIF GG
Sbjct: 7   LSLYIHIPWCIQKCPYCDFNSHALKGDVPHDEYVSHLLADLDADLPLAGHRPLHSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     +  + EIT+EANP +VE + F GY++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQRLLDGVRARLPLEDDAEITMEANPGTVEADRFNGYQQAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A  LA  +     + DL++ LP+Q++ +   +L++A+  
Sbjct: 127 SFSAEKLTRLGRIHGPEEAKRAAQLAAGLGLGSFNLDLMHGLPEQSLDEALDDLRQAIEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  TLF          LP ++   D++     + SA G   YE S ++
Sbjct: 187 SPPHLSWYQLTIEPNTLFGSRPP----RLPDDDALWDIFEQGHQLLSAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNGH 313
             G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++   + + N  
Sbjct: 243 KPGYRCRHNLNYWRFGDYLGIGCGAHGKLSFADGRILRTVKTRHPRGYMQGNYLHQSNEV 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-------RNLDIECERNLQRQG 366
           A+ ++ F        E+ M   RL E     D+  L G       R +D     +  RQG
Sbjct: 303 AMADRPF--------EYFMNRFRLLEAAPRDDFTALTGLPESAVRRQID-----DALRQG 349

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
           ++        + TQ G   L+S++
Sbjct: 350 YLTESA-DHWQITQHGKLFLNSLL 372


>gi|119503512|ref|ZP_01625595.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
 gi|119460574|gb|EAW41666.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
          Length = 384

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 210/379 (55%), Gaps = 12/379 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+C +KCPYCDFNSH +     +  +I + LT+++      G R + S+F GG
Sbjct: 8   LALYVHLPWCERKCPYCDFNSHEQFDSSLETGYIDALLTDLRQQLVSVGSRPLFSVFLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL    +IA +L+GI + W++    EIT+EANP S E + F  YR AGVNR+SLG+Q
Sbjct: 68  GTPSLFSGASIARLLNGIDQIWSIGLTTEITMEANPGSAEASRFADYRSAGVNRLSLGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  +  L  LGR H++++A+ AIHLA+  F R + D+++ LP Q +     +L+RA+ ++
Sbjct: 128 SFADAQLMALGRVHDSAQAMQAIHLAKQHFDRFNLDIMHGLPGQKIETALDDLERAIDHS 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S YQLTIE  T F+         LP++++  D+ +  ++     GL  YE+S  + 
Sbjct: 188 QGHVSWYQLTIEPNTTFWSRPPR----LPNDDILTDIQDAGEARFLESGLTQYEVSAWAS 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               S HNLNYW +GDYIGIG GAH ++ K     +     + P  +L  + +       
Sbjct: 244 HQQMSQHNLNYWTFGDYIGIGAGAHGKITKENGSIIRTRRSRSPRDYLTGIAEG--VPPH 301

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
           ++ L   +   EF++  LRL+ G+    ++   G  L +  E  +++    G +      
Sbjct: 302 QQQLPQTELPVEFMLNALRLKNGVPASLFKANTGLELAV-VEPQIEKLVANGLLS-ADTE 359

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R+  T  G   L+ V+A+ 
Sbjct: 360 RIGTTDHGYRFLNDVVASF 378


>gi|221133358|ref|ZP_03559663.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola sp.
           HTCC2999]
          Length = 382

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 201/339 (59%), Gaps = 12/339 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  + ++ ++   L +++    L   RSI +IF GG
Sbjct: 10  LSLYIHVPWCVQKCPYCDFNSHTLKGGIPEKEYVAHLLDDLRADAHLAQGRSIRTIFIGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ + ++L+G+ +   V+ + EIT+EANP +VE   F G+   GVNR+S+GVQ
Sbjct: 70  GTPSLLSPEALTILLNGVKQIIPVTLDAEITLEANPGTVEAGKFAGFVAGGVNRLSIGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L+ LGR H+  +A  AI  A +      + D+++ LP+QT+     +L++A+ +
Sbjct: 130 SFHPRQLKALGRIHDDQQAHHAIAQAHDAGLHSFNIDIMHGLPEQTVVHGLDDLRQAIHH 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T F+         LP ++   D+    + + +  G   YEIS ++
Sbjct: 190 QSKHISWYQLTIEPNTSFHSKPPQ----LPDDDTLWDIQEQGEVLLAEAGFEQYEISGYA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAHS++   SH +  + + KHP+ ++ +    G + V
Sbjct: 246 QSGFQCQHNLNYWRFGDYLGIGCGAHSKITT-SHGIQRTEKIKHPKGYMNI----GQSYV 300

Query: 317 EKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNL 354
            K++L  +     EF M  LRL E   V ++EML G  L
Sbjct: 301 FKQWLVDKDDYPFEFFMNRLRLVEACGVDEYEMLTGMKL 339


>gi|114321595|ref|YP_743278.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227989|gb|ABI57788.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 398

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/402 (37%), Positives = 213/402 (52%), Gaps = 29/402 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-----RRYK------VGQENFIQSFLT 57
           N   G     LGVY+H P+CV+KCPYCDFNSH      RR        +  E + ++ LT
Sbjct: 2   NPQAGTPPPPLGVYLHLPWCVQKCPYCDFNSHAPARADRRADASTLPAIPHERYTRAVLT 61

Query: 58  EMQWMRQLTGP---RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
           ++       GP   R + ++F GGGTPSL  P+ I  +L+ + +   ++ + EIT+EANP
Sbjct: 62  DLA---SAAGPLQGRRVETVFIGGGTPSLFPPEAIGGLLEALDRRLGLTGDAEITLEANP 118

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSF 173
            +VE   F GYR AGVNR+S+GVQS +  +LR LGR H   E   A     R  F R++ 
Sbjct: 119 GTVEQGRFHGYRAAGVNRLSIGVQSFDAGALRRLGRIHGPEEARRAVRAARRAGFRRINL 178

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL+YALP QT  Q   +++ AL+ A +H+S YQLT+E GT F   H      LP E   +
Sbjct: 179 DLMYALPGQTTAQALADVEAALALAPEHISHYQLTLEPGTPF---HSRPPADLPDEARLL 235

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
            L    +   +A GL  YE+S  +  G    HNLNYWR+GDY+G+G GAH ++   + R 
Sbjct: 236 ALEAACRERLAAAGLTRYEVSAWAHPGEACRHNLNYWRFGDYLGLGAGAHGKLSDPA-RD 294

Query: 294 AISIE---KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            I  E   + P +++        A+ E   L +     EF+M  LRL EG    DW    
Sbjct: 295 EIRREARVRMPGTYMAQAGTPA-AIAELRRLQNGDIVLEFMMNALRLAEGFHRDDWRRHT 353

Query: 351 GRNLDIECERNLQ--RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           GR   +  +R  +    G +      R+R TQRG  +LD ++
Sbjct: 354 GRPTTLFEDRVAEAVTDGLLSD-DGGRIRPTQRGWQLLDGLL 394


>gi|16272411|ref|NP_438624.1| coproporphyrinogen III oxidase [Haemophilus influenzae Rd KW20]
 gi|260580474|ref|ZP_05848302.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus influenzae RdAW]
 gi|1170234|sp|P43899|Y463_HAEIN RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein HI_0463
 gi|1573441|gb|AAC22122.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Haemophilus influenzae Rd KW20]
 gi|260092816|gb|EEW76751.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus influenzae RdAW]
          Length = 383

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|172059922|ref|YP_001807574.1| coproporphyrinogen III oxidase [Burkholderia ambifaria MC40-6]
 gi|171992439|gb|ACB63358.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MC40-6]
          Length = 404

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 208/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPDHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-TAGTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|167619071|ref|ZP_02387702.1| coproporphyrinogen III oxidase [Burkholderia thailandensis Bt4]
          Length = 405

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 198/340 (58%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + ++
Sbjct: 29  LALYVHFPWCVRKCPYCDFNSH--EWKDGGALPEHDYLDALRADLEHALPLVWGRQVHTV 86

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S
Sbjct: 87  FIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLS 146

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ A
Sbjct: 147 IGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETA 206

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S
Sbjct: 207 LTFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQAGYARYEVS 262

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++    +S HNLNYW +GDY+GIG GAH+++   +  +  +  KHP ++++   K G A
Sbjct: 263 AYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGAA 321

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V E+  +       EF++  LRL +G+    +    G +L
Sbjct: 322 VQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSL 361


>gi|82523718|emb|CAI78499.1| coproporphyrinoben III oxidase and related Fe-S oxidoreductase
           [uncultured beta proteobacterium]
          Length = 391

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/349 (38%), Positives = 195/349 (55%), Gaps = 6/349 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S  L +Y+H P+CVKKCPYCDFNSH  +  + +  +I + L +++        R I ++F
Sbjct: 16  SPPLSLYIHLPWCVKKCPYCDFNSHASQV-IPEAAYIDALLLDLERALPDIWGRRIHTVF 74

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL     I  IL G+     +  N EIT+EANP +VE   F G+R+AGV R+SL
Sbjct: 75  FGGGTPSLFSAAGIDRILTGVRTLTQLLPNAEITLEANPGTVEAEKFAGFREAGVTRVSL 134

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   Q L+ LGR H+ SEA  A  LA   F   + DL++ALP QT+ +   ++  AL
Sbjct: 135 GIQSFNSQHLKALGRIHDDSEARRAAELAATHFDTFNLDLMFALPGQTLDEALTDIDTAL 194

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLS Y LT+E  T F          LP ++VA D++   ++  +  G+  YE S 
Sbjct: 195 AFRPPHLSAYHLTLEPNTPFGHTAPPN---LPDDDVAADMHQAIEARLTEAGMQHYETSA 251

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++     S HNLNYW++GDY+GIG GAHS++      +     KHP+ ++  V +  H +
Sbjct: 252 YARPQHASRHNLNYWQFGDYLGIGAGAHSKLSFHDRILRQMRTKHPQQYMDAVAQGTH-I 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            +   L+      EF+M  LRL EG+    +E   G  L I C   L++
Sbjct: 311 ADARTLTRSDLPFEFMMNALRLNEGVPSALFEERTGLPL-IVCTAGLEQ 358


>gi|330972625|gb|EGH72691.1| HemN family oxidoreductase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 404

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARRAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQEAGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|115350909|ref|YP_772748.1| coproporphyrinogen III oxidase [Burkholderia ambifaria AMMD]
 gi|115280897|gb|ABI86414.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia ambifaria AMMD]
          Length = 404

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 208/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|238026482|ref|YP_002910713.1| coproporphyrinogen III oxidase [Burkholderia glumae BGR1]
 gi|237875676|gb|ACR28009.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia glumae BGR1]
          Length = 406

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 209/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +Y+H+P+CV+KCPYCDFNSH  +  +  ++ ++ +   +++        R + ++F 
Sbjct: 28  PLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQEYLDALRADLEQALPFVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A AA+ +A + F   + DL++ALP Q++ +   +++ AL+
Sbjct: 148 IQSFNEAHLKALGRIHDSAQARAAVEIAASRFDNFNLDLMFALPNQSLDECRADIETALA 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  T+F K        +P ++ + D+ +     T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQDWIHERTAEAGYGHYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G             +R+G I+R  F 
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPFSTIEPALAEAERRGLIQR-DFE 381

Query: 375 RLRCTQRGMTMLDSV 389
           R+  T  G   L+ +
Sbjct: 382 RIAPTPLGQRFLNDL 396


>gi|311106530|ref|YP_003979383.1| oxygen-independent coproporphyrinogen III oxidase 2 [Achromobacter
           xylosoxidans A8]
 gi|310761219|gb|ADP16668.1| oxygen-independent coproporphyrinogen III oxidase 2 [Achromobacter
           xylosoxidans A8]
          Length = 406

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 217/375 (57%), Gaps = 9/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +  ++++        R + S+F GG
Sbjct: 32  LSVYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRSDLEQALPSIWGRQVVSVFIGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +L  +     +  + EIT+EANP + E   F+ Y  +GV R SLG+Q
Sbjct: 92  GTPSLLSSEGLDELLAMLRACLNLWPDAEITMEANPGTAEAGRFRDYAASGVTRFSLGIQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ LGR H++++A AAI +A+    R++ D+++ALP QT+     +L++A+++ 
Sbjct: 152 SFDDAQLKKLGRIHDSAQARAAIEMAQRAVSRVNLDMMFALPGQTLEACVADLRQAVAFG 211

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLY LT+E  T+F K   +    LP ++ +  + +  ++  +A GL  YE+S ++ 
Sbjct: 212 TEHLSLYHLTMEPNTVFAKFPPED---LPDDDTSAAMQDAVEAELAAAGLARYEVSAYAK 268

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKNGHAVV 316
            GA   HNLNYW +GDY+G+GPGAH ++      +  +  + P+SW++  M R   H + 
Sbjct: 269 PGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRILREARLRSPDSWMQAAMARDGSH-IA 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFS 374
           E   +  ++   EF++  LRL++G++   +    G +L     +     ++G ++    +
Sbjct: 328 ESRQVGPDELPFEFMLNALRLKDGVAATAFNERTGLSLAAIAHQLEAASKRGLLD-ADPT 386

Query: 375 RLRCTQRGMTMLDSV 389
           RLR T  G   L+ +
Sbjct: 387 RLRATPLGWRFLNDL 401


>gi|283835284|ref|ZP_06355025.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citrobacter youngae ATCC 29220]
 gi|291068442|gb|EFE06551.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citrobacter youngae ATCC 29220]
          Length = 378

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/376 (35%), Positives = 207/376 (55%), Gaps = 14/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDSEVAHAQGREVKTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +LDG+     ++++ EIT+EANP +VE N F  Y++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSGPAMQTLLDGVRARLKLAADAEITMEANPGTVEANRFVDYQRAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EA  A HLA  +  R  + DL++ LP QT+ +   +LQ+A++ 
Sbjct: 127 SFSSAKLERLGRIHGPEEAKRAAHLASGLGLRSFNLDLMHGLPDQTLDEALGDLQQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYLE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFS 374
            +  ++   +  EF M   RL E     ++    G   D+  ++      QG++      
Sbjct: 298 SQRDVAEADKPFEFFMNRFRLLEAAPRAEFTQYTGLAEDVIRQQIDEAIAQGYLSECD-E 356

Query: 375 RLRCTQRGMTMLDSVI 390
             + TQ G   L+S++
Sbjct: 357 YWQITQHGKLFLNSLL 372


>gi|325576990|ref|ZP_08147561.1| coproporphyrinogen dehydrogenase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160948|gb|EGC73067.1| coproporphyrinogen dehydrogenase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 382

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 129/345 (37%), Positives = 200/345 (57%), Gaps = 17/345 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPR 69
           Q    L +YVH P+CV+KCPYCDFNSH ++  + ++ ++Q  + +++      +     R
Sbjct: 2   QKFPPLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEQEYVQHLIADLEADLEKYQASIQNR 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + SIF GGGTPSL   ++I L+L  I +    S N+EIT+EANP +VE   F+GY  AG
Sbjct: 62  PLHSIFIGGGTPSLFSAESIKLLLAEIQRRIPFSENIEITMEANPGTVEAERFKGYVDAG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           V RIS+G+QS  +  L+ LGR HNA+EA +A+ LA+ +     + DL++ LP QT+ +  
Sbjct: 122 VTRISMGIQSFNDDKLQRLGRIHNAAEAKSAVSLAKVSGLKSFNLDLMHGLPNQTLEEAL 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +L++A+  A  HLS YQLTIE  T+F Y+        LP ++   D++     + +  G
Sbjct: 182 DDLRQAIELAPPHLSWYQLTIEPNTMFAYR-----PPTLPDDDELWDIFEQGHQLLTEAG 236

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLK 306
              YE S ++  G +  HNLNYWR+GDY+ IG GAH ++     ++   S  KHP+ +L+
Sbjct: 237 YQQYETSAYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLTFSDGKILRFSKTKHPKGYLR 296

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                G  + E++ +    +A EF M   RL E +  +++E   G
Sbjct: 297 -----GEYLYEEKNVEKNDRAFEFFMNRFRLLEAVPKQEFEHYTG 336


>gi|309972380|gb|ADO95581.1| Putative oxidase [Haemophilus influenzae R2846]
          Length = 383

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +      YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMADYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +S   +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|229846549|ref|ZP_04466657.1| coproporphyrinogen III oxidase [Haemophilus influenzae 7P49H1]
 gi|229810642|gb|EEP46360.1| coproporphyrinogen III oxidase [Haemophilus influenzae 7P49H1]
          Length = 383

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|296137100|ref|YP_003644342.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
 gi|295797222|gb|ADG32012.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
          Length = 429

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 123/326 (37%), Positives = 191/326 (58%), Gaps = 7/326 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+KKCPYCDFNSH  R    + ++ ++ +   ++     L   R + S+F
Sbjct: 46  PLSLYVHLPWCLKKCPYCDFNSHEWRAGGSIPEQAYLAALRADLDAALPLVWGRRVISVF 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I  ++  +     + ++ EIT+EANP + E + F  + +AGVNR+S+
Sbjct: 106 IGGGTPSLFSPEAIDQLITDVRARLPLVADAEITLEANPGTFERDRFAAFAQAGVNRLSI 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS ++  LR LGR H+A +A  A+  A   F   + DL++ALP+Q M   + ++  AL
Sbjct: 166 GVQSFDDDRLRALGRVHDARQAHDAVAEAARHFASFNLDLMFALPQQDMPGCKADVHEAL 225

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLSLYQLT+E  TLF +        LP +++  D+ +    +  A GL  YE+S 
Sbjct: 226 AHQPPHLSLYQLTLEPNTLFARHPPP----LPDDDLTADMQHAVADLAEAAGLQRYEVSA 281

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G    HNLNYW++GDY+GIG GAHS++      V  +  +HP+ +++     G AV
Sbjct: 282 YAAPGHRCRHNLNYWQFGDYVGIGAGAHSKLTFAHRIVRQTRWRHPQRYMEQA-AQGLAV 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGI 341
             +  +S      EF++  LRLREG+
Sbjct: 341 ETEVEVSRSDLPFEFMLNALRLREGV 366


>gi|168236172|ref|ZP_02661230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737657|ref|YP_002116052.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194713159|gb|ACF92380.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290675|gb|EDY30029.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 378

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 191/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + ++LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQMLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|320539541|ref|ZP_08039208.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Serratia symbiotica str. Tucson]
 gi|320030394|gb|EFW12406.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Serratia symbiotica str. Tucson]
          Length = 392

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 211/380 (55%), Gaps = 22/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   + ++     L G R IS++F GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLMADLNADLPLAGDREISTLFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F GY+ AGVNRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQSLLDGVRSRIRVADDAEITMEANPGTVEADRFSGYQHAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H A EA  + HLA  +  R  + DL++ LP Q++     +L++A++ 
Sbjct: 127 SFNAEMLIRLGRIHGAEEAKRSAHLATGLGLRSFNLDLMHGLPDQSLEDALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + S  G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFEQGHQLLSDAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK-MVRKNGHAV 315
             G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +++   R   H V
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTAKTKHPRGFMQGKYRDKQHEV 302

Query: 316 V--EKEFLSSEQQADEFLMMGLRLREGISVKD---WEMLAGRNLDIECERNLQRQGFIER 370
           V  ++ F        EF M   RL E     D   +  LA   +  + E  L +    E 
Sbjct: 303 VLADRPF--------EFFMNRFRLLEAAPRADFVNYTGLAESAIRAQLEEALMKGYLKET 354

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            ++ ++  T++G   L++++
Sbjct: 355 PEYWQI--TEQGKLFLNALL 372


>gi|237745874|ref|ZP_04576354.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
 gi|229377225|gb|EEO27316.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
          Length = 402

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDF SH +   + +  +++    +++    L   R ISSIF G
Sbjct: 27  PLSLYIHIPWCIRKCPYCDFYSHEKTSVLPENEYLKVLRRDLELSLPLIENRKISSIFIG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I  +L  + +   V  + EI++EANP + E   FQ YR++G+NR+S+GV
Sbjct: 87  GGTPSLFSAGGIDKLLSFVRELLPVLPDAEISLEANPGTFEAGKFQSYRRSGINRLSIGV 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  ++ L  LGR H+A EA AA+  A + F   + DL+Y LP QT+ Q + ++  ALSY
Sbjct: 147 QSFTQERLHELGRIHDADEARAAVETAGHYFDNFNLDLMYGLPFQTLDQLKDDVSIALSY 206

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T ++K       VLP E+   ++    ++ T+A G   YE+S ++
Sbjct: 207 KPAHLSFYQLTIEPNTYYFKHPP----VLPDEDAIDEMQTWIETSTAATGYEHYEVSAYA 262

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G + LHN NYW +GDY+GIG  AHS++ +   R+   +  ++P  +++ + K G  + 
Sbjct: 263 RSGRQCLHNRNYWLFGDYLGIGAAAHSKITLPDQRIIRQMRLRNPHLYMQGI-KQGIPLE 321

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           E+  +       EF++  LRL +G S   +    G  L +  +  L R   +  +  S L
Sbjct: 322 EQFEVPVSDLGFEFMLNALRLTDGFSPALFRERTGLPLSV-IDEGLARAAHLGLLHISPL 380

Query: 377 --RCTQRGMTMLDSV 389
             R T+ G   L+ +
Sbjct: 381 HIRPTELGKRFLNDL 395


>gi|332162816|ref|YP_004299393.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667046|gb|ADZ43690.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 376

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 212/377 (56%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDVPLVSGREISTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSAEKLTRLGRIHGPDEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F          LP ++   D++     + SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-----GKYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQF 373
           ++  + +  +  EF M   RL E     D+    G     +  + +  L ++  IE  ++
Sbjct: 298 KQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEEY 357

Query: 374 SRLRCTQRGMTMLDSVI 390
            ++  T++G   L+S++
Sbjct: 358 WQI--TEKGKLFLNSLL 372


>gi|301155284|emb|CBW14750.1| predicted oxidoreductase [Haemophilus parainfluenzae T3T1]
          Length = 382

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/345 (37%), Positives = 200/345 (57%), Gaps = 17/345 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPR 69
           Q    L +YVH P+CV+KCPYCDFNSH ++  + ++ ++Q  + +++      +     R
Sbjct: 2   QKFPPLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEQEYVQHLIADLEAGLDKYQASIQNR 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + SIF GGGTPSL   ++I L+L  I +    S N+EIT+EANP +VE   F+GY  AG
Sbjct: 62  PLHSIFIGGGTPSLFSAESIKLLLAEIQRRIPFSENIEITMEANPGTVEAERFKGYVDAG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           V RIS+G+QS  +  L+ LGR HNA+EA +A+ LA+ +     + DL++ LP QT+ +  
Sbjct: 122 VTRISMGIQSFNDDKLQRLGRIHNAAEAKSAVSLAKVSGLKSFNLDLMHGLPNQTLEEAL 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +L++A+  A  HLS YQLTIE  T+F Y+  K     LP ++   D++     + +  G
Sbjct: 182 DDLRQAIELAPPHLSWYQLTIEPNTMFAYRPPK-----LPDDDELWDIFEQGHQLLTEAG 236

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLK 306
              YE S ++  G +  HNLNYWR+GDY+ IG GAH ++      +   S  KHP+ +L+
Sbjct: 237 YQQYETSAYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLTFPDGDILRFSKTKHPKGYLR 296

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                G  + E++ +    +A EF M   RL E +  +++E   G
Sbjct: 297 -----GEYLYEEKNVEKNDRAFEFFMNRFRLLEAVPKQEFEHYTG 336


>gi|68249065|ref|YP_248177.1| coproporphyrinogen III oxidase [Haemophilus influenzae 86-028NP]
 gi|68057264|gb|AAX87517.1| predicted Fe-S oxidoreductase [Haemophilus influenzae 86-028NP]
          Length = 383

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|254237379|ref|ZP_04930702.1| hypothetical protein PACG_03453 [Pseudomonas aeruginosa C3719]
 gi|126169310|gb|EAZ54821.1| hypothetical protein PACG_03453 [Pseudomonas aeruginosa C3719]
          Length = 384

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 217/383 (56%), Gaps = 24/383 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGTELPEEAYVDALLADLEQDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL
Sbjct: 130 VQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++  AHG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDAHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +K F + E   + AD   EF+M  LRL +G+    +    G+ L    +     +  G 
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGL 357

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +      RLR ++RG   L+ ++
Sbjct: 358 LAD-DPQRLRPSERGQLFLNDLL 379


>gi|268593076|ref|ZP_06127297.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rettgeri DSM 1131]
 gi|291311345|gb|EFE51798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rettgeri DSM 1131]
          Length = 379

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 192/335 (57%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + ++ Q+ ++   L ++    +L   RS+ +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHTLKGEIPQQEYVAHLLADLDIDAKLVAGRSVKTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++  ++DG+ +   +  + E+T+EANP +VE   F GY+ AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAESMQALMDGVRQRVDLDPHAEVTMEANPGTVEAGRFAGYQAAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H A EA  A  LA N+  R  + DL++ LP QT  +   +L++A+  
Sbjct: 127 SFGNDKLITLGRIHGADEAKRAAQLATNLNLRSFNLDLMHGLPAQTQVEGLSDLRQAIEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  T F         VLP ++   D+Y     + SA G   YE S ++
Sbjct: 187 APPHLSWYQLTIEPNTQFGSRPP----VLPDDDTLWDIYTEGHKLLSAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKISFEDGQILRTVKTKHPRGYME-----GRYMH 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   + +  +  E+ M   RL E +   ++    G
Sbjct: 298 QSYDVDASDRPFEYFMNRFRLLEAMPRAEFTQYTG 332


>gi|213424104|ref|ZP_03356997.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 573

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 124/323 (38%), Positives = 190/323 (58%), Gaps = 11/323 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF GG
Sbjct: 202 LSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIGG 261

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GVQ
Sbjct: 262 GTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGVQ 321

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++ 
Sbjct: 322 SFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIAL 381

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S ++
Sbjct: 382 NPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYA 437

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  + 
Sbjct: 438 KPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYLE 492

Query: 317 EKEFLSSEQQADEFLMMGLRLRE 339
            +  +S + +  EF M   RL E
Sbjct: 493 SQRDVSDDDKPFEFFMNRFRLLE 515


>gi|145632729|ref|ZP_01788463.1| coproporphyrinogen III oxidase [Haemophilus influenzae 3655]
 gi|144986924|gb|EDJ93476.1| coproporphyrinogen III oxidase [Haemophilus influenzae 3655]
          Length = 383

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +YVH P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYVHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKNSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSSESIAHLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVLAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|327395109|dbj|BAK12531.1| oxygen-independent coproporphyrinogen III oxidase- like protein
           YggW [Pantoea ananatis AJ13355]
          Length = 379

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 195/336 (58%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L   R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEHDLPLIQGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+ +  T++++ E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRERLTLTADAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA+ +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLERLGRIHGPEEAKRAAALAQGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----TLPDDDALWDIFEQGHQLLTAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKVRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  ++ E +  EF M   RL E     D+    G
Sbjct: 297 DKQYDVADEDKPFEFFMNRFRLLEAAPRADFSRYTG 332


>gi|304396762|ref|ZP_07378642.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
 gi|304355558|gb|EFM19925.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
          Length = 379

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 123/337 (36%), Positives = 195/337 (57%), Gaps = 13/337 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L G R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEIDLPLIGDREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+    T+S + E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRARLTLSPDAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L+ LGR H   EA+ A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLQRLGRIHGPEEAVRAAELAESLSLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGDQLLQAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++   +     
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKTRHPRGFMQGNYR----- 296

Query: 316 VEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            EK++ ++   +  E+ M   RL E     ++    G
Sbjct: 297 -EKQYDVADSDKPFEYFMNRFRLLEAAPRDEFSRYTG 332


>gi|157372269|ref|YP_001480258.1| coproporphyrinogen III oxidase [Serratia proteamaculans 568]
 gi|157324033|gb|ABV43130.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Serratia proteamaculans 568]
          Length = 379

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     L   R +S+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDADLPLVAGREVSTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     V    EIT+EANP +VE + F GY++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQSLLDGVRARIHVVDGAEITMEANPGTVEADRFSGYQRAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSAEKLTRLGRIHGPEEAKRAAHLATGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFERGHELLSAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTAKTKHPRGFMQ-----GKYMD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREG 340
           ++  +++  +  EF M   RL E 
Sbjct: 298 KQHEVTTADRPFEFFMNRFRLLEA 321


>gi|66043738|ref|YP_233579.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254445|gb|AAY35541.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas syringae pv. syringae B728a]
          Length = 404

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARRAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|238918242|ref|YP_002931756.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238867810|gb|ACR67521.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 213/378 (56%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++ Q+ ++   L ++         R+IS++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPQQAYVDHLLADLDQELPRVAGRTISTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++++ EIT+EANP +VE   F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGEALQHLLDGVRARLPLAADAEITMEANPGTVEAERFSAYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EAIAA  LAR +  R  + DL++ LP+Q+  +   +L++A++
Sbjct: 126 QSFSADKLQRLGRIHGPQEAIAAARLARTLGLRSFNLDLMHGLPQQSREEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   +++     +    G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPPR----LPDDDALWEIFEQGDRLLRESGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+    + +HP  +++     G+ +
Sbjct: 242 ALPGRQCQHNLNYWRFGDYLGIGCGAHGKLTFADGRIERHAKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            +++ ++  ++  EF M   RL E     D+    G +   +  + E  L  QG+I R  
Sbjct: 297 DQRQQVAMAERPFEFFMNRFRLLEPAPRADFSAYTGVDQATIRPQLEAALT-QGYI-RET 354

Query: 373 FSRLRCTQRGMTMLDSVI 390
            S  + T  G   L+S++
Sbjct: 355 PSHWQVTPHGKLFLNSLL 372


>gi|317403014|gb|EFV83552.1| porphyrin oxidoreductase [Achromobacter xylosoxidans C54]
          Length = 407

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 215/375 (57%), Gaps = 8/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L VYVH P+CV+KCPYCDFNSH     ++ +  ++ +  ++++        R + S+F G
Sbjct: 32  LSVYVHVPWCVRKCPYCDFNSHAAPGGEIPERAYLDALRSDLEQALPSIWGRQVVSVFIG 91

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     V  + EIT+EANP + E   F+ Y  +GV R SLG+
Sbjct: 92  GGTPSLLSAAGLDELLAMLRACLNVWPDAEITMEANPGTAEAGRFRDYAASGVTRFSLGI 151

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR H++++A AAI +A+   PR++ D+++ALP QT+     +L++A+ +
Sbjct: 152 QSFDDAQLKKLGRIHDSAQARAAIEMAQRAAPRVNLDMMFALPGQTLAACVDDLRQAIGF 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K   +    LP ++ +  + +  ++  +A GL  YE+S ++
Sbjct: 212 GTEHLSLYHLTMEPNTVFAKFPPED---LPDDDTSAAMQDAVEAELAAAGLARYEVSAYA 268

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAVV 316
             GA   HNLNYW +GDY+G+GPGAH ++      V  +  + PESWL+    ++G  + 
Sbjct: 269 RPGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIVREARLRSPESWLRAAAARDGSHLA 328

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFS 374
           E   +  ++   EF++  LRL++G++   +    G +L     +      +G ++    +
Sbjct: 329 ESRQVGPDELPFEFMLNALRLKDGVAATLFNERTGLSLAAIAHQLEAASAKGLLD-ADPT 387

Query: 375 RLRCTQRGMTMLDSV 389
           RLR T  G   L+ +
Sbjct: 388 RLRATPLGWRFLNDL 402


>gi|304309823|ref|YP_003809421.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
 gi|301795556|emb|CBL43754.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
          Length = 396

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/381 (37%), Positives = 208/381 (54%), Gaps = 14/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH +   V + ++I   L ++         R + SIF G
Sbjct: 13  PLSLYVHIPWCVRKCPYCDFNSH-QAIDVNEPHYIDCLLDDLDRDLHWVQERPLHSIFIG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   ++I  ++ GI +   +  ++EIT+EANP + E   F GYR+ GVNR+S+GV
Sbjct: 72  GGTPSLFSAESITRLIKGIQQRIALEPSIEITLEANPGTAEQARFYGYREGGVNRLSIGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR HN   A AAI LAR+  F   + DL++ LP Q++     +LQ AL 
Sbjct: 132 QSFNTDHLQRLGRIHNGDNAKAAIQLARDAGFENFNIDLMHGLPGQSLNHALDDLQTALQ 191

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLS YQLTIE  T+FY         LP ++   D+     ++   +G++ YE+S +
Sbjct: 192 FQPPHLSWYQLTIEPNTVFYNAPPK----LPEDDTLWDIQQAGIALLEQYGMNHYEVSAY 247

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRK-NGH 313
           +  G  S HNLNYW++GDY+GIG GAH ++ V      +   K   P  ++  +      
Sbjct: 248 AKAGRRSRHNLNYWQFGDYLGIGAGAHGKITVRDRGEILRYRKTRLPRDYMAGIDPAKAS 307

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIER 370
            +   E + + +   EF M  LRLREG+  K +E   G +L  E    L++    G +E 
Sbjct: 308 YLAATEAVPAPELPFEFFMNALRLREGVPTKLFEQRTGLDLR-EIAPTLEKALALGLLES 366

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
              S+L  T +G   L+ + A
Sbjct: 367 SP-SQLAPTPQGWLFLNDLTA 386


>gi|321478940|gb|EFX89896.1| hypothetical protein DAPPUDRAFT_299799 [Daphnia pulex]
          Length = 429

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/412 (33%), Positives = 227/412 (55%), Gaps = 23/412 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR----YKVGQENFIQSFLT 57
           K+ S    ++         +Y HWPFC   C +C FN + +      K+  E   +  + 
Sbjct: 6   KFFSPCSTDILENLKTEATMYFHWPFCKNICTFCSFNKYKKVENSFSKIIDERMEKCLIK 65

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E + +   TG + I+SI+FGGGTPSL     I+ I++ + +   V    EITIE NPSS+
Sbjct: 66  ETETILGFTGIKKINSIYFGGGTPSLAPTTTISRIINCVKQLTNVDEQAEITIECNPSSL 125

Query: 118 EVN-NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFD 174
            +    + Y K G+NR+S+GVQSL++ +L+ LGR+H+A++++  +  A ++F    +S D
Sbjct: 126 SMTKTLEEYFKFGINRVSVGVQSLDDGTLKVLGRDHSANDSVMLLKSALDVFGSDAVSVD 185

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L++  P  T+  W+ EL   LSY   H+SLY+LT E+GT  ++  + G +VLP+E+ A  
Sbjct: 186 LLFRKPGDTIQSWKNELNEILSYKPHHISLYELTPERGTPLFRQLQSGTVVLPNEDDAAS 245

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLG--AESLHNLNYWRYGDYIGIGPGAHSR-VKVGSH 291
           +Y L   +   +G   YEISN +  G  A+S HN++YW    Y+GIGPGAHSR   +G++
Sbjct: 246 MYILALELLKEYGFERYEISNFARAGSCAQSSHNMSYWNGTQYVGIGPGAHSRFFPLGAN 305

Query: 292 RVAISIEK-HPESWLKMVRKNGHAVVEKEFLSSEQQAD---EFLMMGLRLREGISVKDWE 347
                ++   P+SW  +V +NGHA         + Q D   E +   LR  +GI  K W 
Sbjct: 306 SRESRVQALDPKSWQDLVERNGHAT---RLCRQQSQIDVLSELVATSLRTTKGIQPKRWL 362

Query: 348 MLAGRN--LDI-ECERNLQRQGFIERVQFS---RLRCTQRGMTMLDSVIANL 393
           +       +D+ E   ++Q       +Q+S    L+ T++G+ ++DS++ N+
Sbjct: 363 IFQPEYSLVDVFEQAPSIQMLFLSGNLQWSVDGSLQATEKGLNVVDSILPNI 414


>gi|330951370|gb|EGH51630.1| HemN family oxidoreductase [Pseudomonas syringae Cit 7]
 gi|330984663|gb|EGH82766.1| HemN family oxidoreductase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 404

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|237729886|ref|ZP_04560367.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
 gi|226908492|gb|EEH94410.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
          Length = 382

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 206/378 (54%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 10  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDTEVAHARGREVKTIFIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 70  GGTPSLLSGPAMQTLLDGVRARLNLAEDAEITMEANPGTVEADRFVDYQRAGVNRISIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A HLA  +  R  + DL++ LP QT+ +   +LQ+A++
Sbjct: 130 QSFSSAKLERLGRIHGPEEAKRAAHLASGLGLRSFNLDLMHGLPDQTLEEALGDLQQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 190 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G  +
Sbjct: 246 ARPGYQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTTKTRHPRGYMQ-----GRYL 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQ 372
             +  ++   +  EF M   RL E     ++    G   D+   R +     QG++    
Sbjct: 301 ESQRDVAEADKPFEFFMNRFRLLEAAPRAEFTQYTGLTEDV-IRRQIDEAISQGYLSECD 359

Query: 373 FSRLRCTQRGMTMLDSVI 390
               + TQ G   L+S++
Sbjct: 360 -EYWQITQHGKLFLNSLL 376


>gi|171315532|ref|ZP_02904768.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
 gi|171099369|gb|EDT44107.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
          Length = 404

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 211/375 (56%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +  +  +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP Q++ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQSLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECE-RNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +  IE   +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFVERTGLPIGTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSV 389
           ++  T  G   L+ +
Sbjct: 382 QIAPTPLGQRFLNDL 396


>gi|145636269|ref|ZP_01791938.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittHH]
 gi|145270434|gb|EDK10368.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittHH]
          Length = 383

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 199/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     + + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQQKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|16761879|ref|NP_457496.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143366|ref|NP_806708.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415042|ref|YP_152117.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363971|ref|YP_002143608.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|213051776|ref|ZP_03344654.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213580617|ref|ZP_03362443.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213609097|ref|ZP_03368923.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213648210|ref|ZP_03378263.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213850156|ref|ZP_03381054.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825936|ref|ZP_06545095.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25284568|pir||AH0878 probable oxygen-independent coproporphyrinogen III oxidase
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16504181|emb|CAD02928.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29139000|gb|AAO70568.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|56129299|gb|AAV78805.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197095448|emb|CAR61007.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
          Length = 378

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|318604343|emb|CBY25841.1| radical SAM family enzyme, similar to coproporphyrinogen III
           oxidase, oxygen-independent,clustered with
           nucleoside-triphosphatase RdgB [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 376

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 212/377 (56%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDVPLVSGREISTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSAEKLTRLGRIHGPYEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F          LP ++   D++     + SA G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-----GKYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQF 373
           ++  + +  +  EF M   RL E     D+    G     +  + +  L ++  IE  ++
Sbjct: 298 KQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEEY 357

Query: 374 SRLRCTQRGMTMLDSVI 390
            ++  T++G   L+S++
Sbjct: 358 WQI--TEKGKLFLNSLL 372


>gi|168264450|ref|ZP_02686423.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168819866|ref|ZP_02831866.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205343497|gb|EDZ30261.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205347072|gb|EDZ33703.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|322613501|gb|EFY10442.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621093|gb|EFY17951.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624157|gb|EFY20991.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628104|gb|EFY24893.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633223|gb|EFY29965.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636199|gb|EFY32907.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639537|gb|EFY36225.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647530|gb|EFY44019.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648714|gb|EFY45161.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653769|gb|EFY50095.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657875|gb|EFY54143.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663978|gb|EFY60177.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669011|gb|EFY65162.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672995|gb|EFY69102.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678014|gb|EFY74077.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681190|gb|EFY77223.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687880|gb|EFY83847.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194924|gb|EFZ80111.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199628|gb|EFZ84718.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202625|gb|EFZ87665.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207888|gb|EFZ92834.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212560|gb|EFZ97377.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214957|gb|EFZ99705.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222687|gb|EGA07052.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225430|gb|EGA09662.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230555|gb|EGA14673.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235094|gb|EGA19180.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239133|gb|EGA23183.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244509|gb|EGA28515.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247124|gb|EGA31090.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253393|gb|EGA37222.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256300|gb|EGA40036.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262524|gb|EGA46080.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267380|gb|EGA50864.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269216|gb|EGA52671.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 378

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|320087536|emb|CBY97301.1| putative oxidase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 382

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 10  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 70  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 130 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 190 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 246 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 301 ESQRDVSDDDKPFEFFMNRFRLLE 324


>gi|168234345|ref|ZP_02659403.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194468958|ref|ZP_03074942.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194455322|gb|EDX44161.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205331708|gb|EDZ18472.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 378

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVVWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++N EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAANAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|88801070|ref|ZP_01116618.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
 gi|88776209|gb|EAR07436.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
          Length = 387

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/360 (36%), Positives = 205/360 (56%), Gaps = 14/360 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L VYVH P+CV+KCPYCDFNSH      +  + F++ F  ++     L   R I+S+FFG
Sbjct: 10  LSVYVHIPWCVRKCPYCDFNSHAADPDSIPVDAFVERFRQDLNQDAPLAQGRPITSVFFG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + I  IL+ +        + EIT+EANP + E   F  YR AGVNR+S+GV
Sbjct: 70  GGTPSLLPAKAIGQILESLNSVIGFEPDAEITLEANPGTFEAERFADYRAAGVNRLSIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L  LGR H+   A+ AI  AR++ F  ++ DL++ LP+Q++     +L +A+ 
Sbjct: 130 QSFADRFLSVLGRIHSGDNAVQAIRQARSVGFDNLNIDLMHGLPEQSIDDALADLNQAID 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE+ T FY+        LP+E+   D+    Q++  + G H YE+S +
Sbjct: 190 LEPTHLSWYQLTIEQNTEFYRQPP----PLPAEDTLWDIQQAGQALIDSAGYHQYEVSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAH---SRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           +    E  HNLNYW+YGD++G+GPGAH   +R+      +     + P+ +L   R    
Sbjct: 246 AQTDRECRHNLNYWQYGDFLGLGPGAHGKITRLDDAGEIIRTRKTRLPKDYLNSERP--- 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERN-LQRQGFIERV 371
            +  +E ++   +  ++ +  LRLR  +S+  +E + G    DI  + + L+ +G+I+R 
Sbjct: 303 LIRMEEAVTEVDRPFDYFINTLRLRTPVSLTHFEQMTGLSRADIAPQLDALEAKGWIKRT 362


>gi|320321989|gb|EFW78085.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330906|gb|EFW86880.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330872130|gb|EGH06279.1| HemN family oxidoreductase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 404

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAHS++     R+  + + + P+ +L   +      
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHSKLSHPDGRIMRTWKTRLPKDYLNPDKPFQAGA 326

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 327 ---KLLPLDELPFEFLMNALRLTNGVDAALFRKRTGLSLDSLTEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|183596318|ref|ZP_02958346.1| hypothetical protein PROSTU_00053 [Providencia stuartii ATCC 25827]
 gi|188023922|gb|EDU61962.1| hypothetical protein PROSTU_00053 [Providencia stuartii ATCC 25827]
          Length = 379

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/335 (36%), Positives = 196/335 (58%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  + Q  +++  L +++   +  G R+I ++F GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHTLKGDIPQREYVEHLLHDLEIDAKFIGDRAIKTLFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++  ++DG+ +   +    EIT+EANP +VE + F GY+KAG+NRIS+GVQ
Sbjct: 67  GTPSLLSAESMQALMDGVRQRVHLDPQAEITMEANPGTVEADRFSGYQKAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H A EA  A  LA  +  R  + DL++ LP QT  +   +L++A++ 
Sbjct: 127 SFGDDKLITLGRIHGAEEAKRAAKLATQLNLRSFNLDLMHGLPSQTRDEGLSDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F          LP ++   ++Y+    + +A G   YE S ++
Sbjct: 187 SPPHLSWYQLTIEPNTQFGSRPP----TLPDDDTLWEIYSEGHKLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + 
Sbjct: 243 KPGFQCEHNLNYWRFGDYLGIGCGAHGKISFTDGRIMRTIKTKHPRGYME-----GRYLQ 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   + ++ +  E+ M   RL E +  K++    G
Sbjct: 298 KSYDVDAQDRPFEYFMNRFRLLEPMPRKEFSDYTG 332


>gi|291618776|ref|YP_003521518.1| YggW [Pantoea ananatis LMG 20103]
 gi|291153806|gb|ADD78390.1| YggW [Pantoea ananatis LMG 20103]
          Length = 379

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 195/336 (58%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L   R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEHDLPLIQGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+ +  T++++ E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRERLTLTADAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA+ +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLERLGRIHGPEEAKRAAVLAQGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----TLPDDDALWDIFEQGHQLLTAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKVRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  ++ E +  EF M   RL E     D+    G
Sbjct: 297 DKQYDVADEDKPFEFFMNRFRLLEAAPRADFSRYTG 332


>gi|307132435|ref|YP_003884451.1| putative oxidoreductase [Dickeya dadantii 3937]
 gi|306529964|gb|ADM99894.1| predicted oxidoreductase [Dickeya dadantii 3937]
          Length = 379

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 193/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     L G R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLPLAGGRPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+    ++ +  EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLSLPAEAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A++
Sbjct: 126 QSFSPDKLTRLGRIHGPEEAKRAARLAAGLGLRSFNLDLMHGLPEQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + S  G   YE S +
Sbjct: 186 LNSPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHRLLSDAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFADGRILRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  ++   +  EF M   RL E     D+    G
Sbjct: 297 QQRSEVALADRPFEFFMNRFRLLEPAPRVDFTAYTG 332


>gi|323702396|ref|ZP_08114061.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532702|gb|EGB22576.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 378

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/383 (35%), Positives = 218/383 (56%), Gaps = 18/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGP--RSIS 72
           ++G+Y+H PFC++KC YCDF S    Y + QE    +I++   E+    QL  P  ++I+
Sbjct: 2   AIGLYIHVPFCIRKCLYCDFTS----YLLKQEQVALYIKALKGEIILYGQLLAPEHKTIA 57

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTP+ +  + +A ILD +A+ +T+    EIT EANP +V +N+ +  ++ G NR
Sbjct: 58  SIFVGGGTPTCLMSRQLADILDQVARYFTIQPGAEITTEANPGTVSLNSLKELKRVGFNR 117

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQS  ++ L  +GR HN  +A  A+  AR   F  ++ DLI+ LP+QT  QW   L
Sbjct: 118 LSLGVQSTHQELLNLIGRIHNLDQARQAVDFARQAGFNNLNLDLIFGLPRQTAAQWRQSL 177

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + L++  +HLS Y L +E+ T   +  + GDL    E + + +Y  T  + +  G   Y
Sbjct: 178 SQVLAWQPEHLSCYGLQLEESTPLARAVERGDLPACPEELELAMYLTTIEVLAEAGYRHY 237

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G E  HNL YW    Y+G+GP AHS +    +    +   H + + ++V + 
Sbjct: 238 EISNFAKPGYECRHNLIYWHNQQYLGLGPAAHSYI----NNARWANVDHIDKYARLVAQG 293

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECER--NLQRQGFI 368
              V E   L+  +Q +E   +GLRL +G+ +K +    GR L ++  +R  +LQ QG +
Sbjct: 294 MQPVEECHRLTPREQMEETAFLGLRLMKGLELKSFAQRFGRELTEVFGDRIKDLQAQGLV 353

Query: 369 ERVQFSRLRCTQRGMTMLDSVIA 391
           E ++   LR T++G+ + + V A
Sbjct: 354 E-LKDGFLRLTKKGLPVANRVFA 375


>gi|300723971|ref|YP_003713285.1| putative oxidase [Xenorhabdus nematophila ATCC 19061]
 gi|297630502|emb|CBJ91167.1| putative oxidase [Xenorhabdus nematophila ATCC 19061]
          Length = 376

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L +++    + G R +S IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLRADLPMIGDREVSMIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+  +  +S   EIT+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEGMQRLLDGVRDSLRLSPQAEITMEANPGTVEADRFNAYQQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP QT+ +   +L++A+ 
Sbjct: 126 QSFGSDKLIRLGRIHGPEEAKRAAKLADGLGLRSFNLDLMHGLPNQTLNEALNDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F         VLP ++   D+++    + +  G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTRFGSRPP----VLPDDDALWDIFSQGHQLLTEAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKISFEDGRILRTVKTKHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +K  +  + +  EF M   RL E +  +D+    G
Sbjct: 297 DQKNQVDHDDRPFEFFMNRFRLLESMPRQDFSDFTG 332


>gi|330961992|gb|EGH62252.1| HemN family oxidoreductase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 404

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 209/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     + L+L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGLLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHEDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 ARLVATPQGQLFLNDLL 399


>gi|168463709|ref|ZP_02697626.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195633771|gb|EDX52185.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 378

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVHARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|87121162|ref|ZP_01077053.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Marinomonas sp. MED121]
 gi|86163654|gb|EAQ64928.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Marinomonas sp. MED121]
          Length = 388

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/385 (34%), Positives = 216/385 (56%), Gaps = 19/385 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRY----KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +YVH P+CVKKCPYCDFNSH   R+    K+ +  ++     +++        R I 
Sbjct: 7   PLSLYVHLPWCVKKCPYCDFNSHQADRFEEEGKLPEAAYLAQLFADLEIDLAYVQGRQIQ 66

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL+       ++ G+ +     SN EIT+EANP + E   F  +RKAG+NR
Sbjct: 67  SMFIGGGTPSLMSADFYYQLMAGLKQKLDFVSNAEITMEANPGTFEQEKFAHFRKAGINR 126

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS +   L+ LGR HN  EA+AA+  +R   F  ++ DL++ LP Q++ Q   +L
Sbjct: 127 LSIGIQSFQPNLLKTLGRIHNREEAMAAVDKSRLAGFDNINIDLMHGLPDQSLEQAMEDL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+  A +HLS YQLTIE  T FY+   +    LP +N    + ++ Q++   HG   Y
Sbjct: 187 EIAIKLAPEHLSWYQLTIEPNTEFYRRPPE----LPEDNTLWHIQDMGQALLKKHGYAQY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK 310
           E+S +S +  ++ HNLNYWR+GDY+GIG GAH ++ +   ++  + + +HP  +L  +  
Sbjct: 243 EVSANSQINKQAKHNLNYWRFGDYLGIGAGAHGKITLADGQIFRTRKTRHPNHYLGNLPP 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGF 367
              A+  KE +  +    EFLM  LRL E   + ++++           + L++   +G 
Sbjct: 303 ---ALCIKESVEKDDMPFEFLMNRLRLFEAFDLDEYQIFCQHKPPESLLKQLEKAVEKGL 359

Query: 368 IERV--QFSRLRCTQRGMTMLDSVI 390
           +E    Q  R+  T++G   L+ ++
Sbjct: 360 LEADDWQNKRICTTEKGKLFLNELL 384


>gi|200388353|ref|ZP_03214965.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199605451|gb|EDZ03996.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 378

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G   
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDSRILRTTKTRHPRGYMQ-----GRYQ 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|62181614|ref|YP_218031.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62129247|gb|AAX66950.1| putative oxidase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322716097|gb|EFZ07668.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 391

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 19  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVVWAQGREVKTIFIG 78

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 79  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 138

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 139 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 198

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 199 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 254

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 255 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 309

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 310 ESQRDVSDDDKPFEFFMNRFRLLE 333


>gi|161616068|ref|YP_001590033.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168242907|ref|ZP_02667839.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|194450201|ref|YP_002047092.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205354027|ref|YP_002227828.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858365|ref|YP_002245016.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238909902|ref|ZP_04653739.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|161365432|gb|ABX69200.1| hypothetical protein SPAB_03869 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408505|gb|ACF68724.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|205273808|emb|CAR38803.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205338001|gb|EDZ24765.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|206710168|emb|CAR34524.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|326629140|gb|EGE35483.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 378

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|123443632|ref|YP_001007604.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090593|emb|CAL13462.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 211/377 (55%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDVPLVSGREISTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++ 
Sbjct: 127 SFSAEKLTRLGRIHGPDEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F          LP ++   D++     + S  G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSTAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-----GKYLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQF 373
           ++  + +  +  EF M   RL E     D+    G     +  + +  L ++  IE  ++
Sbjct: 298 KQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEEY 357

Query: 374 SRLRCTQRGMTMLDSVI 390
            ++  T++G   L+S++
Sbjct: 358 WQI--TEKGKLFLNSLL 372


>gi|224584897|ref|YP_002638696.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469425|gb|ACN47255.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 378

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVVWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|330886249|gb|EGH20150.1| HemN family oxidoreductase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 404

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFNNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +      
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLNPDKPFQAGA 326

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 327 ---KLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|281201785|gb|EFA75993.1| hypothetical protein PPL_10571 [Polysphondylium pallidum PN500]
          Length = 438

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/410 (34%), Positives = 228/410 (55%), Gaps = 35/410 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPR-----SI 71
           +  +Y+HWP+C K CPYC FN ++    V      QSFLTE+ Q +++  G        +
Sbjct: 32  TTSIYIHWPYCSKICPYCSFNKYMDGPHVDHSAMKQSFLTELNQIVKKYYGENGSDLPKL 91

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--------------NVEITIEANPSSV 117
           +SI+FGGGTPSL     I  I++   K + V                ++EIT+E NP  +
Sbjct: 92  TSIYFGGGTPSLAPVDTITSIVNESLKLFNVDRQQLLQQHQNDNHDHSLEITLEVNPDKI 151

Query: 118 EVNNFQGYRKAG-VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
           +++    ++    +NR+SLGVQ+  ++ L+FLGR H A++A  AI     +F R++FDLI
Sbjct: 152 DIDKLSDFKNHSLINRVSLGVQAFNDKDLKFLGRTHTANDAKQAISKCNQLFKRVNFDLI 211

Query: 177 YALPK-QTMTQWEMELQRALSYAV-DHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAV 233
           YA  + QT  QW+ E+  A+      H+SLY L  E+GT     +K  + ++P++ ++  
Sbjct: 212 YARHQNQTKEQWKQEINEAIDLCERGHISLYSLCFEEGTKL--NNKKNNQIIPADHDLNF 269

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHR 292
           +LY + +      G++ YEISN S     S HNLNYWR GDYIGIGPGA SR+ K+   R
Sbjct: 270 ELYEIAKQQLERAGINQYEISNFSRENQRSRHNLNYWRGGDYIGIGPGACSRITKLDGTR 329

Query: 293 VAISIEKHPESWLKMVRKNGHAV--VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            ++    HP SW+  V   G  +  VE + L+ E++ +E L+MGLR  EG++ + ++ + 
Sbjct: 330 HSLKCVLHPRSWITQVTDTGDGLDTVESKQLTIEERVNELLLMGLRTVEGVNRETFKSIT 389

Query: 351 -GRNL-DIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G+++ D+     L+     G +  +  +RL  T +G  +LD +I  + +
Sbjct: 390 NGKDIEDVLSATKLKYLISNGMLS-LDNNRLCSTTKGFMLLDKIILEICL 438


>gi|167552004|ref|ZP_02345757.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205323333|gb|EDZ11172.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 378

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRTRLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|83720503|ref|YP_442123.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|257138311|ref|ZP_05586573.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|83654328|gb|ABC38391.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Burkholderia thailandensis E264]
          Length = 405

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 197/340 (57%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + ++
Sbjct: 29  LALYVHFPWCVRKCPYCDFNSH--EWKDGGALPEHDYLDALRADLEHALPLVWGRQVHTV 86

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S
Sbjct: 87  FIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLS 146

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ A
Sbjct: 147 IGIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETA 206

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+      YE+S
Sbjct: 207 LTFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQASYARYEVS 262

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++    +S HNLNYW +GDY+GIG GAH+++   +  +  +  KHP ++++   K G A
Sbjct: 263 AYAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGAA 321

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V E+  +       EF++  LRL +G+    +    G +L
Sbjct: 322 VQEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSL 361


>gi|289625042|ref|ZP_06457996.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647869|ref|ZP_06479212.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330865789|gb|EGH00498.1| HemN family oxidoreductase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 404

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQHLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|320170747|gb|EFW47646.1| radical S-adenosyl methionine domain-containing protein 1
           [Capsaspora owczarzaki ATCC 30864]
          Length = 480

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/352 (37%), Positives = 190/352 (53%), Gaps = 22/352 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFF 76
           ++ VY+HWP+C + CPYC FN  +    V      ++ +TE+       GP R ISS++F
Sbjct: 48  AVSVYMHWPYCSRICPYCAFNRTLMDKSVDVARMQRAMVTELGAQLAHIGPGRKISSVYF 107

Query: 77  GGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANP----SSVEVNNFQGYRKAGVN 131
           GGGTPSL  P  +  +L  + A    + S +E+T+E NP     S  +   Q +  AGV 
Sbjct: 108 GGGTPSLAPPGLVKDLLHTLRAYQPDLPSGMEVTLEFNPIQCHGSGGLELLQSFAAAGVT 167

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R SLGVQ+     L+ LGR+H   +A+ A+  AR +FP R+S DL++A P QT+  WE +
Sbjct: 168 RASLGVQTFNPVHLKTLGRDHTPEQALDALQNARAVFPGRVSLDLMFATPTQTIRDWEED 227

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---G 247
           LQ A+++A  H+SLY LT+EKGT F+  H  G L LP+++ A D+  L     S+H    
Sbjct: 228 LQLAVAHADAHISLYHLTLEKGTSFFTRHSRGALALPNDDQAGDMLELASRTLSSHQPRP 287

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------------HRVAI 295
            H YE++N +    ES HNL YW   DY+ IGPGAH RV +               R A 
Sbjct: 288 WHRYEVANFAQPSHESQHNLGYWAGNDYLAIGPGAHGRVTLPPLPAAGTNATSTWRRFAT 347

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             ++    WL+ V   G     +E  +   +  E L M LR R GI+ + W+
Sbjct: 348 VQQRSTPHWLQSVETRGRGTHREEQQTPVDRLQEVLTMALRTRRGITTRAWD 399


>gi|194443015|ref|YP_002042363.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194401678|gb|ACF61900.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 378

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLRDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVETDRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|254482747|ref|ZP_05095985.1| putative oxygen-independent coproporphyrinogen III oxidase [marine
           gamma proteobacterium HTCC2148]
 gi|214037106|gb|EEB77775.1| putative oxygen-independent coproporphyrinogen III oxidase [marine
           gamma proteobacterium HTCC2148]
          Length = 378

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/381 (35%), Positives = 204/381 (53%), Gaps = 18/381 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C +KCPYCDFNSH   + V ++ +I + L ++     +   R I ++F GG
Sbjct: 6   LSLYIHLPWCERKCPYCDFNSHESSH-VPEQAYITALLQDLDADLAMAAGREIQTLFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   + I+ +L GI     ++ + E T+EANP S E + F G+R+AG+NR+SLGVQ
Sbjct: 65  GTPSLFSAEAISRLLAGIGDRLELAPDAEATMEANPGSAEADKFLGFRQAGINRLSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S ++  L  LGR H++ +A AAI  A    F   + DL++ LP QT      +L+ A+S+
Sbjct: 125 SFQDDKLGALGRVHDSKQARAAIEYASAAGFDSFNIDLMHGLPGQTEADAIYDLETAISF 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T+F K        LP E+   D+ +  + +    G   YE+S +S
Sbjct: 185 HPPHLSWYQLTIEPNTVFNKRPP----TLPVEDALADIQDRGELLLENQGYAQYEVSAYS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVV 316
               +  HNLNYW +GDY+ +G GAH ++      +   +  + P+ +L+  R       
Sbjct: 241 RPELQCQHNLNYWSFGDYLALGAGAHGKITTADGSIRRYAKTRAPQDYLQGERY----TA 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS-- 374
            K  L+  +   EF+M  LRL  G S + +E + G + D   +   + Q   +R   S  
Sbjct: 297 SKRVLNQGELIGEFMMFALRLNNGFSTQRFEQVTGLSAD---QLRPKVQSLADRELLSTD 353

Query: 375 --RLRCTQRGMTMLDSVIANL 393
              +R T  G   LDSVIA  
Sbjct: 354 GDNIRATPLGRRFLDSVIAEF 374


>gi|56461080|ref|YP_156361.1| hypothetical protein IL1980 [Idiomarina loihiensis L2TR]
 gi|56180090|gb|AAV82812.1| Uncharacterized Fe-S oxidoreductase [Idiomarina loihiensis L2TR]
          Length = 383

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 210/380 (55%), Gaps = 13/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     V + +++   L +++        R I SIF GG
Sbjct: 10  LSLYIHIPWCIQKCPYCDFNSHKLTGDVPEASYVGRLLEDLRADIDWVQGREIQSIFIGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + I  ++DG+     +S + E+T+EANP + E   F  +  AG+NR+S+GVQ
Sbjct: 70  GTPSVLSAKAIQQLMDGVRSIVALSPDCEVTMEANPGTFETEKFSAFVAAGINRLSIGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL+E  L+ LGR HN  +AI AA H +       + DL++ LP QT+     +L++ ++ 
Sbjct: 130 SLQEHQLQRLGRIHNPQQAINAAAHASELPLSSFNLDLMHGLPDQTVEMALDDLRQIIAL 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  TLF     +    LP ++   ++Y     +  A G   YE+S ++
Sbjct: 190 NPPHISWYQLTIEPNTLFASQPPE----LPDDDTLWEIYQQGHKLLEAAGYSQYEVSAYA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
             G +S HN NYW+YGDY+GIG GAHS+V +      +  E  KHP+ +L + +   + +
Sbjct: 246 KPGHQSRHNRNYWQYGDYLGIGCGAHSKVTLPQQNKILRCEKVKHPKGYLDLTKPLRYQL 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            E   ++ E +  EF M   RL E +S  ++E     + ++   + L     +E V    
Sbjct: 306 KE---VAVEDRLFEFFMNQFRLLEPVSKSNFEQTTALSAEV-ASKQLTEAKTLELVTEDE 361

Query: 376 L--RCTQRGMTMLDSVIANL 393
           L  + TQRG   L+SV+  L
Sbjct: 362 LNWQLTQRGHRFLNSVLDTL 381


>gi|242277644|ref|YP_002989773.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           salexigens DSM 2638]
 gi|242120538|gb|ACS78234.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           salexigens DSM 2638]
          Length = 398

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/392 (36%), Positives = 229/392 (58%), Gaps = 16/392 (4%)

Query: 11  MTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTG 67
           + G GS +  L VY+H PFC +KC YC F+S     +VG   ++++ L+E++ W ++L  
Sbjct: 13  LRGDGSEARNLLVYIHVPFCKRKCNYCAFHSQPFE-QVGFAWYMKTLLSEIELWGKRLKN 71

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYR 126
           PR I +++FGGGTPSLI P  + LI+D + K+++ +  +EIT+EANP S  +++ F+   
Sbjct: 72  PR-IGTVYFGGGTPSLIPPFQLELIMDALRKHFSFTKGMEITLEANPDSANDLSYFKALY 130

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G+NR+SLG QSL++++L  LGR H+A +A  A ++AR   F  +S DLI+ LP+Q + 
Sbjct: 131 DMGINRLSLGFQSLDDRNLEMLGRPHSARQAADAYYMARKAGFGNISIDLIWGLPRQKVK 190

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W  EL+  +    +H+S Y L+IE GT+F +  +D D+ LP +     ++        A
Sbjct: 191 DWNNELKAVVQLKPEHMSCYGLSIEPGTVFGQRAEDLDMELPPDGEQARMFIYGAEYLEA 250

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN + +G  S HN  YW   DY+G+GP A S   +G+ R   +  ++ + + 
Sbjct: 251 MGYIQYEISNFARMGFISRHNQGYWDRLDYLGLGPSAVS--TIGNRR--FTNPRYLDEYD 306

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNL 362
             VR  G    + E L+ E +A E +M+ LR  +G+ + D+  L GR+L  E       L
Sbjct: 307 AAVR-GGFLGEDFEELTDEIKAQELIMLCLRTTKGLKLSDYTELTGRDLTKEKTSIISAL 365

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            + G + R+    LR T+ GM + +S++ +LA
Sbjct: 366 HKNGLV-RMSAGYLRLTKNGMLVSNSILESLA 396


>gi|145640435|ref|ZP_01796019.1| coproporphyrinogen III oxidase [Haemophilus influenzae R3021]
 gi|145275021|gb|EDK14883.1| coproporphyrinogen III oxidase [Haemophilus influenzae 22.4-21]
          Length = 383

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 198/340 (58%), Gaps = 17/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  +     R + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 67  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++
Sbjct: 127 MGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++     + +  G   YE
Sbjct: 187 AIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+ DY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFRDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           G  + E++ +    +  EF M   RL E +  +++E   G
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 336


>gi|146293787|ref|YP_001184211.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella putrefaciens CN-32]
 gi|145565477|gb|ABP76412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella putrefaciens CN-32]
          Length = 387

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/382 (35%), Positives = 210/382 (54%), Gaps = 16/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF GG
Sbjct: 16  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL + + I  IL+G       S N+EIT+EANP ++E ++F  YR AG+ R+S+GVQ
Sbjct: 76  GTPSLFDAKQIKRILEGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA IAA   ++  +   + DL++ LP Q+  +  ++++ A + 
Sbjct: 136 SFAKDKLNLLGRIHDQNEAKIAAQKASQAKYLSFNLDLMHGLPNQSFDEAMLDIETAAAL 195

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 196 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQRLAALGYEQYEISAYA 251

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +      I     KHP+ +L     +    
Sbjct: 252 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEQNRIIRTAKIKHPKGYL----SSNQYT 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
           VE   ++ E +A E+LM  LRL   I  +++E   G     L    E+  QR    E  +
Sbjct: 308 VELTEVAEEDRALEYLMNRLRLMTPIPKQEFEQRTGLHRETLSEGMEKAKQRGLLTESAE 367

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
           + +L  T +G   ++ ++    
Sbjct: 368 YWQL--THKGHMFVNDLLTQFC 387


>gi|327412906|emb|CAX67920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella bongori]
          Length = 378

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/376 (35%), Positives = 211/376 (56%), Gaps = 14/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAGAQGREVKTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSGRAMQTLLDGVRARLNLAVDAEITMEANPGTVEADRFVDYQRAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  L+ LGR H   EA  A +LA  +  R  + DL++ LP QT+ +   +L++A++ 
Sbjct: 127 SFSEPKLKKLGRIHGPKEAKRAANLASGLALRSFNLDLMHGLPDQTLEEALNDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  + 
Sbjct: 243 KSGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYLE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQFS 374
            +  +    +  EF M   RL E     ++    G   ++  ++  +   QG++   +  
Sbjct: 298 SQREVEDADKPFEFFMNRFRLLEAAPRVEFSQYTGLGEEVIRQQMDEAIAQGYVTESE-D 356

Query: 375 RLRCTQRGMTMLDSVI 390
             + TQRG   L+S++
Sbjct: 357 NWQITQRGKLFLNSLL 372


>gi|33592684|ref|NP_880328.1| coproporphyrinogen III oxidase [Bordetella pertussis Tohama I]
 gi|33572330|emb|CAE41884.1| putative porphyrin oxidoreductase [Bordetella pertussis Tohama I]
 gi|332382099|gb|AEE66946.1| coproporphyrinogen III oxidase [Bordetella pertussis CS]
          Length = 406

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 215/374 (57%), Gaps = 8/374 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +   +++        R + S+F GG
Sbjct: 33  LSVYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRADLEQAVPEVWGRQVISVFIGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  +     +  + EIT+EANP + E   F+ Y  +GV R+SLG+Q
Sbjct: 93  GTPSLLSAAGLDELLAMLRACLNLLPDAEITMEANPGTAEAGRFRDYAASGVTRLSLGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L  LGR H+A++A AAI +A+    R++ DL++ALP Q + Q   +L++AL++ 
Sbjct: 153 SFDDAQLSRLGRIHDAAQARAAIAMAQQTVERVNLDLMFALPGQELEQCRADLRQALAFG 212

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLY LT+E  T+F K   +    LP ++ +  + ++ +   +  GL  YE+S ++ 
Sbjct: 213 TEHLSLYHLTLEPNTVFAKYPPE----LPDDDASAAMQDMVEETLAQAGLARYEVSAYAR 268

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVVE 317
            GA   HNLNYW +GDY+G+GPGAH ++         +  ++P+SW+ + + ++G  V E
Sbjct: 269 RGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIERQARLRNPDSWMQRAMARDGSHVAE 328

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSR 375
              + + +   EF++  LRL+EG++   +    G +L     +     R+G ++    +R
Sbjct: 329 SRVVGAGELPFEFMLNALRLKEGVAAPSFGERTGLSLAAIAHQLEAATRRGLLD-ADPTR 387

Query: 376 LRCTQRGMTMLDSV 389
           LR T  G   L+ +
Sbjct: 388 LRATALGWRFLNDL 401


>gi|116054116|ref|YP_788559.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589337|gb|ABJ15352.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 384

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 216/383 (56%), Gaps = 24/383 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGTELPEEAYVDALLADLEQDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL
Sbjct: 130 VQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++  AHG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDAHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++     + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDDLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +K F + E   + AD   EF+M  LRL +G+    +    G+ L    +     +  G 
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGL 357

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +      RLR ++RG   L+ ++
Sbjct: 358 LAD-DPQRLRPSERGQLFLNDLL 379


>gi|288933575|ref|YP_003437634.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
 gi|288888304|gb|ADC56622.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
          Length = 378

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 192/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYIEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++    G
Sbjct: 302 VEEADKPF--------EFFMNRFRLLEAAPRAEFRRYTG 332


>gi|218889127|ref|YP_002437991.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa LESB58]
 gi|218769350|emb|CAW25110.1| probable oxidase [Pseudomonas aeruginosa LESB58]
          Length = 384

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 216/383 (56%), Gaps = 24/383 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL
Sbjct: 130 VQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++   HG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDEHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +K F + E   + AD   EF+M  LRL +G+    +    G+ L    +     +  G 
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGL 357

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +      RLR ++RG   L+ ++
Sbjct: 358 LAD-DPQRLRPSERGQLFLNDLL 379


>gi|257483582|ref|ZP_05637623.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331009659|gb|EGH89715.1| HemN family oxidoreductase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 404

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGGEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPIHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|206578289|ref|YP_002236593.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Klebsiella pneumoniae 342]
 gi|206567347|gb|ACI09123.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Klebsiella pneumoniae 342]
          Length = 378

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 192/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++   + R++ 
Sbjct: 242 AQPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++    G
Sbjct: 302 VEEADKPF--------EFFMNRFRLLEAAPRAEFSRYTG 332


>gi|167990369|ref|ZP_02571469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205331198|gb|EDZ17962.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261248235|emb|CBG26072.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267995269|gb|ACY90154.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159659|emb|CBW19178.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|323131460|gb|ADX18890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|332989971|gb|AEF08954.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 378

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAKRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNCFRLLE 320


>gi|283788523|ref|YP_003368388.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           rodentium ICC168]
 gi|282951977|emb|CBG91704.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citrobacter rodentium ICC168]
          Length = 378

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 194/335 (57%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLAADVSFAQGREVKTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +LDG+    T++++ EIT+EANP +VE + F  Y++AG+NRIS+GVQ
Sbjct: 67  GTPSLLSGPAMQTLLDGVRARLTLAADAEITMEANPGTVEADRFVDYQRAGINRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP+QT+ +   +L++A++ 
Sbjct: 127 SFSEAKLKRLGRIHGPEEARRAARLASGLGLRSFNLDLMHGLPEQTLEEALDDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         +LP ++   D++     + +A G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFGSRPP----LLPDDDALWDIFEQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G  + 
Sbjct: 243 KPGYQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTTKTRHPRGYMQ-----GRYLE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +  ++   +  EF M   RL E    +++    G
Sbjct: 298 SQRDVAQADKPFEFFMNRFRLLEAAPRREFSDYTG 332


>gi|33597533|ref|NP_885176.1| coproporphyrinogen III oxidase [Bordetella parapertussis 12822]
 gi|33601931|ref|NP_889491.1| coproporphyrinogen III oxidase [Bordetella bronchiseptica RB50]
 gi|33573961|emb|CAE38279.1| putative porphyrin oxidoreductase [Bordetella parapertussis]
 gi|33576369|emb|CAE33447.1| putative porphyrin oxidoreductase [Bordetella bronchiseptica RB50]
          Length = 406

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/374 (33%), Positives = 215/374 (57%), Gaps = 8/374 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +   +++        R + S+F GG
Sbjct: 33  LSVYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRADLEQAVPEVWGRQVISVFIGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  +     +  + EIT+EANP + E   F+ Y  +GV R+SLG+Q
Sbjct: 93  GTPSLLSAAGLDELLAMLRACLNLLPDAEITMEANPGTAEAGRFRDYAASGVTRLSLGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L  LGR H+A++A AAI +A+    R++ DL++ALP Q + Q   +L++AL++ 
Sbjct: 153 SFDDAQLSRLGRIHDAAQARAAIAMAQQAVERVNLDLMFALPGQELEQCRADLRQALAFG 212

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLY LT+E  T+F K   +    LP ++ +  + ++ +   +  GL  YE+S ++ 
Sbjct: 213 TEHLSLYHLTLEPNTVFAKYPPE----LPDDDASAAMQDMVEETLAQAGLARYEVSAYAR 268

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVVE 317
            GA   HNLNYW +GDY+G+GPGAH ++         +  ++P+SW+ + + ++G  V E
Sbjct: 269 RGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIERQARLRNPDSWMQRAMARDGSHVAE 328

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSR 375
              + + +   EF++  LRL+EG++   +    G +L     +     R+G ++    +R
Sbjct: 329 SRVVGAGELPFEFMLNALRLKEGVAASSFGERTGLSLAAIAHQLEAATRRGLLD-ADPTR 387

Query: 376 LRCTQRGMTMLDSV 389
           LR T  G   L+ +
Sbjct: 388 LRATALGWRFLNDL 401


>gi|152971907|ref|YP_001337016.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956756|gb|ABR78786.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 378

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 192/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPNQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++    G
Sbjct: 302 VEEADKPF--------EFFMNRFRLLEAAPRAEFSRYTG 332


>gi|126175233|ref|YP_001051382.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS155]
 gi|125998438|gb|ABN62513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS155]
          Length = 388

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 199/344 (57%), Gaps = 11/344 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF GG
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIGG 76

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 77  GTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 136

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA +AA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 137 SFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 197 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQKLAALGYEQYEISAYA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +I+ KHP+ +L       +  
Sbjct: 253 KPGYQCKHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTIKIKHPKGYLSA----SNYT 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E
Sbjct: 309 FESIDVAEEDRALEYLMNRLRLMTAIPKQEFELRTGQHRDTLTE 352


>gi|198243140|ref|YP_002217079.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197937656|gb|ACH74989.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
          Length = 378

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/322 (38%), Positives = 187/322 (58%), Gaps = 11/322 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EAI A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAIRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G   
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYQ 296

Query: 316 VEKEFLSSEQQADEFLMMGLRL 337
             +  +S + +  EF M   RL
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRL 318


>gi|296386884|ref|ZP_06876383.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAb1]
          Length = 384

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/344 (36%), Positives = 198/344 (57%), Gaps = 19/344 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++        R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLHHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++  AHG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDAHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +   
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLNP 298

Query: 317 EKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL 354
           +K F + E   + AD   EF+M  LRL +G+    +    G+ L
Sbjct: 299 QKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPL 342


>gi|16766405|ref|NP_462020.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197265423|ref|ZP_03165497.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|16421657|gb|AAL21979.1| putative oxidase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|197243678|gb|EDY26298.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|312914126|dbj|BAJ38100.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225777|gb|EFX50831.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
          Length = 378

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAKRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|15595583|ref|NP_249077.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAO1]
 gi|9946239|gb|AAG03775.1|AE004476_5 probable oxidase [Pseudomonas aeruginosa PAO1]
          Length = 384

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/345 (36%), Positives = 201/345 (58%), Gaps = 21/345 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL
Sbjct: 130 VQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++   HG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDEHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL 354
            +K F + E   + AD   EF+M  LRL +G+    +    G+ L
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPL 342


>gi|307823237|ref|ZP_07653467.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
 gi|307736012|gb|EFO06859.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
          Length = 379

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/387 (35%), Positives = 213/387 (55%), Gaps = 23/387 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +Y+H P+C+KKCPYCDFNSH  + ++ +  +I + L ++   + +    R ISSIF G
Sbjct: 4   LSLYIHIPWCIKKCPYCDFNSHAAKSELPESAYIAALLDDLALDIERYNITRPISSIFIG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I  +L GI +   +   +EIT+EANP + E + F  +R  G+NR+S+G+
Sbjct: 64  GGTPSLFSPEAINRLLRGIEQQLRLEEGLEITLEANPGTFESHKFAEFRALGINRLSIGI 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L+ LGR H+A EAI A  +AR   F   + DL++ LP  T    ++++Q A+S
Sbjct: 124 QSFNDPLLKKLGRVHSAQEAIHAADIARQSGFDNFNLDLMFGLPGATPESSKIDIQTAVS 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T F+K        LP +          Q + + HG   YE+S +
Sbjct: 184 LKPTHISFYQLTLEPNTWFHKFPPK----LPDDETIFRTQKECQQLLAEHGYQQYEVSAY 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI-----EKHPESWLKMVRKN 311
           S  G +  HN+NYW++GDY+GIG GAH ++   +  +  SI      K PE +L    KN
Sbjct: 240 SKQGLQCRHNVNYWQFGDYLGIGAGAHGKI---TQSLPQSIVRSFKPKSPEQYLSNSHKN 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFI 368
           G A V    ++      EF+M  LRL+ G  ++D++    LA   L+      +++   I
Sbjct: 297 GGADV----IAVADLPLEFIMNHLRLKRGFMLEDYQAATGLAATTLEPALSDCVKQNLLI 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
              Q +   C+++G   LD+++    V
Sbjct: 353 R--QNNHYYCSEQGWNFLDNILEKFIV 377


>gi|254243485|ref|ZP_04936807.1| hypothetical protein PA2G_04301 [Pseudomonas aeruginosa 2192]
 gi|126196863|gb|EAZ60926.1| hypothetical protein PA2G_04301 [Pseudomonas aeruginosa 2192]
          Length = 384

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/345 (36%), Positives = 201/345 (58%), Gaps = 21/345 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRMSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL
Sbjct: 130 VQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++   HG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDEHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL 354
            +K F + E   + AD   EF+M  LRL +G+    +    G+ L
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPL 342


>gi|331654467|ref|ZP_08355467.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
 gi|331047849|gb|EGI19926.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
          Length = 378

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 193/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGSAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           + LG +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKLGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSAYTGLCEDV 337


>gi|330941610|gb|EGH44393.1| HemN family oxidoreductase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 404

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 208/377 (55%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDMPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALRRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q + + H    YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----ALPEDDILWDIQETGQQLLATHSYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 TRLIATPQGQLFLNDLL 399


>gi|157148505|ref|YP_001455824.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157085710|gb|ABV15388.1| hypothetical protein CKO_04331 [Citrobacter koseri ATCC BAA-895]
          Length = 378

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 208/377 (55%), Gaps = 14/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDTNVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPEEAKRAANLASGLGLRSFNLDLMHGLPDQTLEEALGDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 ARPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G    +  E+      QG++   + 
Sbjct: 297 ESQRDVEQADKPFEFFMNRFRLLEAAPRAEFTQYTGLAEAVIREQLDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVI 390
              + TQ G   L+S++
Sbjct: 356 QHWQITQHGKLFLNSLL 372


>gi|308188047|ref|YP_003932178.1| oxidase [Pantoea vagans C9-1]
 gi|308058557|gb|ADO10729.1| putative oxidase [Pantoea vagans C9-1]
          Length = 379

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 194/337 (57%), Gaps = 13/337 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L   R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEIDLPLINGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+    T++ + E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRARLTLAPDAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L+ LGR H   EA+ A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLQRLGRIHGPEEAVRAAELAESLSLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGDRLLQAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK-MVRKNGHA 314
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++   R+  + 
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKTRHPRGFMQGNYREKQYE 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           VV+ +      +  E+ M   RL E     ++    G
Sbjct: 302 VVDSD------KPFEYFMNRFRLLEAAPRDEFSRYTG 332


>gi|261342372|ref|ZP_05970230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315007|gb|EFC53945.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterobacter cancerogenus ATCC 35316]
          Length = 380

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVPYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  EQ L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEQKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++    G
Sbjct: 302 VEAADKPF--------EFFMNRFRLLEAAPRTEFSRYTG 332


>gi|120553465|ref|YP_957816.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Marinobacter aquaeolei VT8]
 gi|120323314|gb|ABM17629.1| coproporphyrinogen III oxidase, anaerobic [Marinobacter aquaeolei
           VT8]
          Length = 382

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 209/377 (55%), Gaps = 16/377 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + ++ +  ++ + L ++     L   R I ++F GG
Sbjct: 13  LSLYIHVPWCVRKCPYCDFNSHAVKGEIPEHAYLNALLEDLDQDLGLVRERPIETVFIGG 72

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+       + + + +  T S   EIT+EANP ++E   F+ +R+AG+NR+S+GVQ
Sbjct: 73  GTPSLMSGAFYHRLFERLRERLTFSPEAEITLEANPGTLETGRFESFREAGINRLSIGVQ 132

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+ + A +AI  AR   F   + DL++ LP QT +Q   +LQ ALSY
Sbjct: 133 SFDPAQLKTLGRIHDRASAHSAIEAARKAGFDNFNVDLMHGLPDQTPSQALDDLQAALSY 192

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T F+         LP ++   ++Y L   +    G+  YE+S  S
Sbjct: 193 QPRHLSWYQLTIEPNTEFFSRPP----ALPDDDRLWEIYQLGGDLLRQAGMDDYEVSAWS 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             GA+S HNLNYW +GDY+ +G G H +V +   R+    + + P+++L  +   G    
Sbjct: 249 LPGAQSRHNLNYWTFGDYLALGAGGHGKVSLADGRILRYWKTRQPDAYLNRI---GSRTA 305

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
             E +  E +  EF+M  LRL+ G   + +    G  L    ++ E+ L+ +  I     
Sbjct: 306 GSEAIEPEDRPLEFMMNALRLKSGTDERLYGEHTGLPLSSIAVKLEQ-LRNENLIVP--- 361

Query: 374 SRLRCTQRGMTMLDSVI 390
            RL+ T +G   L+S++
Sbjct: 362 DRLQATAKGQRYLNSLL 378


>gi|197249679|ref|YP_002148018.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197213382|gb|ACH50779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 378

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVVWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+     +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEGALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|225573017|ref|ZP_03781772.1| hypothetical protein RUMHYD_01208 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039631|gb|EEG49877.1| hypothetical protein RUMHYD_01208 [Blautia hydrogenotrophica DSM
           10507]
          Length = 387

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 139/386 (36%), Positives = 219/386 (56%), Gaps = 26/386 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFF 76
           L +YVH PFCVKKC YCDF S      + +  ++Q+ L E++ +  R+      + SIFF
Sbjct: 15  LEIYVHLPFCVKKCDYCDFLSGPYSEDI-RSAYVQAVLKEIRSLGRRERAENWKVRSIFF 73

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + I  ILD I +++      EI++EANP ++  N  + Y+  G+NR+SLG
Sbjct: 74  GGGTPSLMNGEEITQILDEIRRDFQFEPEAEISLEANPGTLTENKLKAYQSGGINRLSLG 133

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS ++Q L+ LGR H   E + + H+AR   F  ++ DL+  +P Q++  WE  L+  L
Sbjct: 134 CQSAKDQELKRLGRIHTWEEFLKSYHMAREAGFQNINVDLMSGIPGQSVLDWEENLEAVL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   +H+S Y L +E+GT FY+     +L LP E+    +Y  T+ I   HG H YEISN
Sbjct: 194 ALTPEHISAYSLIVEEGTPFYER----ELNLPDEDSERRMYERTREILEEHGYHQYEISN 249

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E LHNL YW+   Y+G+G GA S  K        ++     S LK    +G  +
Sbjct: 250 YALRGKECLHNLGYWQRVSYLGVGLGAASLRK--------NVRYCNTSDLKEYLAHGADL 301

Query: 316 ----VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL----QRQGF 367
                ++E L+  ++ +EFL +GLR+ +GI  +++    GR L+ E   N+    ++ G 
Sbjct: 302 DVLQKQREVLTQREEMEEFLFLGLRMIQGIREEEFLKNFGRPLE-EAYGNVIEKHEKLGL 360

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           +ER+   RLR T+RG+++ + V  + 
Sbjct: 361 LERLD-GRLRLTRRGISLSNQVFVDF 385


>gi|146313000|ref|YP_001178074.1| coproporphyrinogen III oxidase [Enterobacter sp. 638]
 gi|145319876|gb|ABP62023.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter sp. 638]
          Length = 380

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVSYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H ++EA  A HLA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEPKLKRLGRIHGSAEAKRAAHLATGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPPK----LPDDDALWDIFEQGHQMLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +  E +  EF M   RL E
Sbjct: 297 ERQHDVEVEDKPFEFFMNRFRLLE 320


>gi|152984897|ref|YP_001345880.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PA7]
 gi|150960055|gb|ABR82080.1| probable oxidase [Pseudomonas aeruginosa PA7]
          Length = 384

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 214/383 (55%), Gaps = 24/383 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQAKFADYRRLGINRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+  EA+ A  +AR   F   + DL++ LP Q++     +L++AL
Sbjct: 130 VQSFQADKLQALGRIHDGDEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++   HG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDEHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGR--NLDIECERNLQRQGF 367
            +K F + E   + AD   EF+M  LRL +G+    +    G+      +     +  G 
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAALADACAAARDAGL 357

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +      RLR ++RG   L+ ++
Sbjct: 358 LAE-DPQRLRPSERGQLFLNDLL 379


>gi|107099371|ref|ZP_01363289.1| hypothetical protein PaerPA_01000383 [Pseudomonas aeruginosa PACS2]
          Length = 384

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 215/383 (56%), Gaps = 24/383 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++  +R + G R + SIFF
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEHDLRHVHG-RRLGSIFF 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+G
Sbjct: 70  GGGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L +AL
Sbjct: 130 VQSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLSQAL 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  HLS YQLT+E  T+F+    +    LP +++  D+    Q++   HG   YE S 
Sbjct: 190 ALAPTHLSWYQLTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDEHGYRQYETSA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HNLNYW +GD++GIG GAH+++     R+         +W   + K+ +  
Sbjct: 246 YARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLN 297

Query: 316 VEKEFLSSE---QQAD---EFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +K F + E   + AD   EF+M  LRL +G+    +    G+ L    +     +  G 
Sbjct: 298 PQKAFQAGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGL 357

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +      RLR ++RG   L+ ++
Sbjct: 358 LAD-DPQRLRPSERGQLFLNDLL 379


>gi|204928090|ref|ZP_03219290.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204322412|gb|EDZ07609.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 378

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++        +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQR-----RYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +S + +  EF M   RL E
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLE 320


>gi|118579732|ref|YP_900982.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pelobacter propionicus DSM 2379]
 gi|118502442|gb|ABK98924.1| coproporphyrinogen III oxidase, anaerobic [Pelobacter propionicus
           DSM 2379]
          Length = 381

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 124/332 (37%), Positives = 191/332 (57%), Gaps = 12/332 (3%)

Query: 21  VYVHWPFCVKKCPYCDF----NSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIF 75
           +Y+H PFC+ KCPYC F     S  RR     E +++    EM+     +   R + S++
Sbjct: 5   LYIHIPFCLHKCPYCAFISQEGSPARR-----EAYVELLQAEMRLAHAGIPSGRPLESVY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  I  IL      +++  + EIT+EANP +++     G+R +GVNR+SL
Sbjct: 60  FGGGTPSLLEPDQIGRILSLADTLFSLLPHAEITLEANPGTIDRAKLAGFRHSGVNRLSL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQSL+++ L  LGR H+A++A  A+  AR   F  +  DLI+ALP QTM  W  +L+RA
Sbjct: 120 GVQSLDDRMLASLGRIHSAAQAEQAVKAARATGFANIGIDLIHALPGQTMEMWRHDLERA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L  A +HLS+Y LTIE+GT F + +   D  LP E+++ D++     +  A G   YEI+
Sbjct: 180 LDLAPEHLSVYGLTIEEGTPFAQRYTH-DRDLPDEDLSADMFLAADDLLGAAGYEHYEIA 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G  S HN  YWR   Y+G+G GAHS ++   H +  +     + +   + +    
Sbjct: 239 NYALPGFRSRHNSGYWRRDGYLGLGAGAHSFLRGTGHGLRFANSSDVDEYAAAITRGQLP 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             E   +S +    EF+ +GLR+ +G++  D+
Sbjct: 299 RQEMTEISDDDALAEFMFLGLRMLDGVTFSDF 330


>gi|304410077|ref|ZP_07391696.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|307302211|ref|ZP_07581969.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
 gi|304351486|gb|EFM15885.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|306914249|gb|EFN44670.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
          Length = 388

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 199/344 (57%), Gaps = 11/344 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF GG
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIGG 76

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 77  GTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 136

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA +AA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 137 SFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 197 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQKLAALGYEQYEISAYA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L       +  
Sbjct: 253 KPGYQCKHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNYT 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E
Sbjct: 309 FESIEVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTE 352


>gi|220936123|ref|YP_002515022.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219997433|gb|ACL74035.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 387

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 186/329 (56%), Gaps = 8/329 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  R  V +  ++ + L +++        R + S+F G
Sbjct: 5   PLSLYIHLPWCVRKCPYCDFNSHEAREAVPEAAYVDALLADLESELPRVWGRRLESVFLG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ +  +   +        ++E+T+EANP + +   F+GYR+AGVNR+S+GV
Sbjct: 65  GGTPSLFSPEALDHLFSELRARLPWRPDMEVTLEANPGTTDAGRFRGYREAGVNRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  LR LGR H A EA  A   AR+  F  ++ DL++ LP QT+     +L   L+
Sbjct: 125 QSFDDDQLRQLGRIHGAREARVAFEAARSAGFENINIDLMFGLPGQTVAGALKDLAEGLA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HLS YQLT+E  T F         VLP E+   D++   Q   +  G   YE+S +
Sbjct: 185 LGPEHLSWYQLTLEPNTRFAAQPP----VLPEEDTLWDMHTAGQEHLAEAGYTQYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHA 314
           +  G    HNLNYW +GDY+GIG GAH ++ + +    +   KH  P  +++  R +G A
Sbjct: 241 ARAGRPCRHNLNYWEFGDYLGIGAGAHGKISLPAEGRILRRWKHRQPRQYMEAAR-SGEA 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISV 343
              +  L+ E+   EF++  +RL +G+ +
Sbjct: 300 ASGEHTLTREETVFEFMLNAMRLNQGVPL 328


>gi|152998330|ref|YP_001343165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Marinomonas sp. MWYL1]
 gi|150839254|gb|ABR73230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Marinomonas sp. MWYL1]
          Length = 389

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 213/377 (56%), Gaps = 21/377 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRY----KVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           L +Y+H P+CV+KCPYCDFNSH   R+    K+ ++ ++   L ++         R I +
Sbjct: 8   LSLYIHLPWCVRKCPYCDFNSHQADRFEDNGKLPEDAYLAQLLADLDADLPYVAGREIQT 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            F GGGTPSL+       ++D + +    + N EIT+EANP + E   F+ +R+AG+NR+
Sbjct: 68  AFIGGGTPSLMSEDFYYHLMDALREKLVWADNAEITMEANPGTFEQEKFRHFRQAGINRL 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR HN  EAI A+  +R   F  ++ DL++ LP Q++     +L 
Sbjct: 128 SIGIQSFQPNLLKTLGRIHNREEAIHAVDKSRAAGFDNINLDLMHGLPDQSLEMALEDLS 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+    +HLS YQLTIE  T FY+        LP +N    + +  Q++ + HG   YE
Sbjct: 188 LAIELNPEHLSWYQLTIEPNTEFYRRPP----TLPEDNTLWGIQDAGQALLAKHGYAQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           +S +S    ++ HNLNYWR+GDYIGIG GAH ++ + + ++  + + +HP  +L  +   
Sbjct: 244 VSANSKENRQAAHNLNYWRFGDYIGIGAGAHGKITLINGQIFRTRKTRHPNHYLNNL--- 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA----GRNLDIECERNLQRQGF 367
             A+V KE +  E    EF+M  LRL E   +KD+E  A      +L   CE  L +QG 
Sbjct: 301 AEALVIKEAIEQEDLPLEFMMNRLRLFETFDLKDYERFAYQKVPNSLVKACEIAL-KQGL 359

Query: 368 --IERVQFSRLRCTQRG 382
             I+  +  R++ T++G
Sbjct: 360 LDIDEWKKQRIKTTEKG 376


>gi|238896486|ref|YP_002921224.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548806|dbj|BAH65157.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 379

 Score =  235 bits (600), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 192/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAHYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGLAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++ +  G
Sbjct: 302 VEEADKPF--------EFFMNRFRLLEAAPRAEFSLYTG 332


>gi|296104619|ref|YP_003614765.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059078|gb|ADF63816.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 382

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 126/339 (37%), Positives = 193/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVPYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQSLLDGVRARLNLAADAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPEEAKRAAKLATELGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              V+K F        EF M   RL E    K++ +  G
Sbjct: 302 VEAVDKPF--------EFFMNRFRLLEAAPRKEFALYTG 332


>gi|217972512|ref|YP_002357263.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS223]
 gi|217497647|gb|ACK45840.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS223]
          Length = 388

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 199/344 (57%), Gaps = 11/344 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF GG
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIGG 76

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 77  GTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 136

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA +AA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 137 SFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 197 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQKLAALGYEQYEISAYA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L       +  
Sbjct: 253 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNYT 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E
Sbjct: 309 FESIDVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTE 352


>gi|82545422|ref|YP_409369.1| coproporphyrinogen III oxidase [Shigella boydii Sb227]
 gi|187733274|ref|YP_001881728.1| coproporphyrinogen III oxidase [Shigella boydii CDC 3083-94]
 gi|191167957|ref|ZP_03029760.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B7A]
 gi|309794044|ref|ZP_07688469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 145-7]
 gi|81246833|gb|ABB67541.1| putative oxidase [Shigella boydii Sb227]
 gi|187430266|gb|ACD09540.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shigella boydii CDC 3083-94]
 gi|190902042|gb|EDV61788.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B7A]
 gi|308122451|gb|EFO59713.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 145-7]
 gi|320174049|gb|EFW49219.1| coproporphyrinogen III oxidase [Shigella dysenteriae CDC 74-1112]
 gi|320184302|gb|EFW59114.1| coproporphyrinogen III oxidase [Shigella flexneri CDC 796-83]
 gi|332091339|gb|EGI96427.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella boydii 3594-74]
          Length = 378

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDV 337


>gi|209694130|ref|YP_002262058.1| coproporphyrinogen III oxidase [Aliivibrio salmonicida LFI1238]
 gi|208008081|emb|CAQ78222.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Aliivibrio salmonicida LFI1238]
          Length = 386

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 126/344 (36%), Positives = 194/344 (56%), Gaps = 13/344 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISS 73
            L +Y+H P+C++KCPYCDFNSH  +  + +  +I + +    T++        PR + S
Sbjct: 6   PLSLYIHIPWCIQKCPYCDFNSHALKTTIPEAQYISALIDDLDTDLARYNMQNEPRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI    I  +L  + K    + ++EIT+EANP +VE   F  YR+AGVNRI
Sbjct: 66  IFIGGGTPSLITAPEIKRLLIEVEKRLPFADDIEITMEANPGTVEAGRFIEYREAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +++ L  LGR H   EA+ A  LA        + DL++ LP Q++     +L+
Sbjct: 126 SIGVQSFQQEKLEKLGRIHGKDEALRAARLAHEAGLNSFNLDLMHGLPNQSIDDALSDLK 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+FY         LP ++   D++     I +  G   YE
Sbjct: 186 QAIELNPPHLSWYQLTIEPNTVFYYKPP----TLPDDDDLWDIFEQGHQILADAGYVQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           IS +S +G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L +++  
Sbjct: 242 ISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGRIIRTTKIKHPRGFLDLMKP- 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              +++++ ++   ++ EF M   RL E    +D+    G  L+
Sbjct: 301 --YLIDEQEVADHDRSFEFFMNRFRLLEACPKQDFIDKTGLGLE 342


>gi|148262291|ref|YP_001228997.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Geobacter uraniireducens Rf4]
 gi|146395791|gb|ABQ24424.1| coproporphyrinogen III oxidase, anaerobic [Geobacter uraniireducens
           Rf4]
          Length = 381

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/381 (37%), Positives = 217/381 (56%), Gaps = 13/381 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGG 79
           +Y+H+PFC+KKC YCDFNS V    +    ++ + + EM+   + L  P +  +++FGGG
Sbjct: 5   LYIHFPFCLKKCLYCDFNS-VADSPLKPAEYVATLVREMELCAKTLRAPVTAPTLYFGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+EP+ +  I+D  A+ + + ++ EITIEANP ++ +    GYR AGVNR+SLGVQS
Sbjct: 64  TPSLMEPELVGAIIDAAARLFGLEADGEITIEANPGTLTLEKLAGYRTAGVNRLSLGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L  LGR H A EA+AA   AR   F  +  DLI++LP Q++  W   L RA S A
Sbjct: 124 FDDPLLARLGRVHTADEAMAAYAAARAAGFTNIGIDLIHSLPGQSVEMWRNALDRATSLA 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L+IE+ T F+++ + G L LP E  AV ++  T  + +  G   YEISN + 
Sbjct: 184 PEHISAYGLSIEEETPFFRLEEAGALPLPDEEEAVAMFEATIEVLAGKGYQYYEISNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES---WLKMVRKNGHAV 315
            G  S HN  YWR G+Y+G G GAHS ++     V     K+P+S   +L+ V+++  A 
Sbjct: 244 PGFRSRHNQVYWRRGNYLGFGAGAHSFLREPDWGVRW---KNPDSYVPYLEAVQRSVLAA 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQ 372
            E+  LS  +   E   +GLRL +G+ ++  E   G  ++       R L  QG +    
Sbjct: 301 EERHPLSRREALSEAFFLGLRLLDGVDLRLLEGEFGPAVEEYFAAPIRELTAQGLLA-AD 359

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             RL  + R + + + V A  
Sbjct: 360 AGRLCLSPRAIIVANQVFARF 380


>gi|198284083|ref|YP_002220404.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667160|ref|YP_002426738.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248604|gb|ACH84197.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519373|gb|ACK79959.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 385

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 195/362 (53%), Gaps = 7/362 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N T +  +S  +YVH P+C  KCPYCDFNSH    ++  E ++ + + ++         R
Sbjct: 2   NPTLKPPSSYSLYVHLPWCKAKCPYCDFNSHAAD-RIPAERYLDALIADLDRELPRIWGR 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+ ++F GGGTPSL  P+ I  ++  I       S +EIT+EANP ++E   F+ +R+ G
Sbjct: 61  SVRTVFIGGGTPSLFPPEIIDRLISTIRARLRPHSRMEITLEANPGAIEAAYFRAFREVG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           + R+SLG+QS  + SL+ LGR H+A+ A  A+ LA    F   + DLI+ALP Q +    
Sbjct: 121 ITRLSLGIQSFNDDSLQRLGRIHDAAAAHRAVELAIAAEFESYNLDLIFALPGQDLAAAR 180

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L+ AL YA  HLSLYQLT+E GT F   H   D  LP  + A D+ ++ +      G+
Sbjct: 181 ADLRTALEYAPPHLSLYQLTLEAGTPF-STHPPAD--LPDSDQAADMEDILRRQLQEAGM 237

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEIS H+  G    HN NYW YGDYIGIG GAH ++ +            PES++   
Sbjct: 238 ERYEISAHARPGHRCQHNRNYWLYGDYIGIGAGAHGKITLPEGIWRSRKPSRPESYMDDA 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
                 + ++E +    +  EF++  LRL +G  V  +    G +L I     R  +R G
Sbjct: 298 LSVLDILGDREPILPADRPFEFMLNALRLTDGFPVALFPERTGLSLQIIQPQLRQAERDG 357

Query: 367 FI 368
            +
Sbjct: 358 LV 359


>gi|120598141|ref|YP_962715.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. W3-18-1]
 gi|120558234|gb|ABM24161.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. W3-18-1]
          Length = 387

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/382 (35%), Positives = 213/382 (55%), Gaps = 16/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R + +IF GG
Sbjct: 16  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQVHTIFIGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL + + I  IL+G       S N+EIT+EANP ++E ++F  YR AG+ R+S+GVQ
Sbjct: 76  GTPSLFDAKQIKRILEGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA IAA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 136 SFAKDKLNLLGRIHDQNEAKIAAQKASQAKYLSFNLDLMHGLPNQSFDEAMADIDTAAAL 195

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 196 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQRLAALGYEQYEISAYA 251

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L     +    
Sbjct: 252 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEQNRIIRTVKIKHPKGYL----SSNQYT 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
           VE   ++ E +A E+LM  LRL   I  +++E   G     L    E+  QR    E  +
Sbjct: 308 VELTEVAEEDRALEYLMNRLRLMTPIPKQEFEQRTGLHRETLSEGMEKAKQRGLLTESAE 367

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
           + +L  T +G   ++ ++    
Sbjct: 368 YWQL--THKGHMFVNDLLTQFC 387


>gi|52425801|ref|YP_088938.1| coproporphyrinogen III oxidase [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307853|gb|AAU38353.1| HemN protein [Mannheimia succiniciproducens MBEL55E]
          Length = 385

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 217/394 (55%), Gaps = 30/394 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLT 66
           MT      L +YVH P+CV+KCPYCDFNSH ++  + + ++I+  +T++Q      +   
Sbjct: 1   MTTLVLPPLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEIDYIRHLVTDLQADLLRFKDSV 60

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R + SIF GGGTPSL   ++I  +L  I K    S ++EIT+EANP +VE   FQGY 
Sbjct: 61  QNRPLHSIFIGGGTPSLFSAESITCLLTEIKKLIDFSPHIEITMEANPGTVEAERFQGYV 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
           KAGV RIS+G+QS  ++ L+ LGR HNA EA +A+ +A+ +     + DL++ LP QT  
Sbjct: 121 KAGVTRISMGIQSFNDEKLKALGRIHNAREAKSAVEIAKISGLKSFNLDLMHGLPNQTPE 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           Q   +L++A++    HLS YQLTIE  T+F Y+       VLP ++   D++     + +
Sbjct: 181 QALDDLRQAIALNPPHLSWYQLTIEPNTMFAYR-----PPVLPDDDELWDIFERGHRLLT 235

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPES 303
             G   YE S ++    +  HNLNYWR+GDY+ +G GAH ++  V    +  S  KHP+ 
Sbjct: 236 EAGYRQYETSAYAKPDFQCQHNLNYWRFGDYLAVGCGAHGKMSFVNGDIIRYSKTKHPKG 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-------RNLDI 356
           +L+     G  + E+  ++   +  EF M   RL E +   ++    G       + +D 
Sbjct: 296 YLR-----GEYLYEERLINEADRPFEFFMNRFRLLEPVPKTEFVQFTGLPESAVKKQIDW 350

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E+N     +I   + S  + T+RG   L+ ++
Sbjct: 351 ALEKN-----YIIETE-STWQITERGKLFLNELL 378


>gi|326201856|ref|ZP_08191726.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           papyrosolvens DSM 2782]
 gi|325987651|gb|EGD48477.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           papyrosolvens DSM 2782]
          Length = 380

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 215/383 (56%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           SN+ G+Y+H PFC  KC YCDFNS+  +     +N+ ++   E++  ++      I +IF
Sbjct: 4   SNNSGLYIHVPFCSSKCNYCDFNSYAGKINFA-DNYFKAMKKEVELYKEYMKDYLIHTIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++  + I  IL+     + +S N EI+IE+NP ++ +   + Y+KAG+NRIS+
Sbjct: 63  IGGGTPSVVSERYIFEILEKCKTCFNISDNCEISIESNPGTLSIEKLKAYKKAGINRISM 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ ++  L++LGR H+  +  A++  AR+  F  ++ D+I+ +P QT+  W+  L   
Sbjct: 123 GLQAYQKNLLKYLGRCHSHEDFSASVKNARDAGFENINADIIFGIPGQTIENWKETLSYL 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  ++H+S Y L IE+GT F  M K+G LV   + +  ++Y+      S  GL  YEIS
Sbjct: 183 ISRGINHISAYSLKIEEGTKFGTMEKEGSLVQVEDELDREMYHYAVDYLSEQGLKQYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YW+  DY+G+G GAHS +K     V  S E   E ++  ++     
Sbjct: 243 NFAKAGYECKHNLTYWKCVDYLGLGAGAHSCLK----DVRFSNEVSIEGYIDYLKHGDKP 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERV 371
           V E   L    +  E++ +GLRL +G++ +++ +   ++L  + +     L+++G IE +
Sbjct: 299 VYENIPLELTDKMSEYMFLGLRLTKGVTGREFFLRFNQDLFSKYKASLEKLEKKGLIE-I 357

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               ++ T  G  + + V     
Sbjct: 358 SGDCVKLTSLGFDLANQVFVEFV 380


>gi|317493547|ref|ZP_07951968.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918490|gb|EFV39828.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 376

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/336 (35%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++  +    ++   L ++      T  R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPSTEYVDHLLADLDADVAFTSGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  ++DG+     ++ N E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEGMQRLMDGVRARLPLAPNAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A HLA+ +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSAEKLTRLGRIHGPEEAKRAAHLAQGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPPK----LPDDDALWDIFQRGDELLRAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCHHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTAKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  + ++ +  EF M   RL E     ++++  G
Sbjct: 297 DKQHEVGNDDRPFEFFMNRFRLLEPTPRAEFQLYTG 332


>gi|312795399|ref|YP_004028321.1| Oxygen-independent coproporphyrinogen-III oxidase [Burkholderia
           rhizoxinica HKI 454]
 gi|312167174|emb|CBW74177.1| Oxygen-independent coproporphyrinogen-III oxidase (EC 1.3.99.22)
           [Burkholderia rhizoxinica HKI 454]
          Length = 426

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/359 (34%), Positives = 199/359 (55%), Gaps = 12/359 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           L +YVH+P+CV KCPYCDFNSH         +  +  ++ +   +++    L   R + +
Sbjct: 46  LSLYVHFPWCVHKCPYCDFNSHAFTRGPNDAQFPETEYLDALRADLEAALPLIWGRPVHT 105

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+  Q I  +L  +     + ++ EIT+EANP + E   F  +R +G+NR+
Sbjct: 106 VFIGGGTPSLLSAQAIDRLLSDLRALLPLDADAEITLEANPGTFEAAKFASFRSSGINRL 165

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A++A  A+ +A + F   + DL++ALP Q + Q + +++ 
Sbjct: 166 SIGIQSFNDAHLQALGRIHDAAQARRAVEIAHSSFDNFNLDLMFALPGQRLAQCQADVET 225

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+A  HLSLY LT+E  T F+K        LP ++ + D+     + T   G + YE+
Sbjct: 226 ALSFAPPHLSLYHLTLEPNTYFHKYPP----ALPDDDTSADMQEWIHARTHEAGYNRYEV 281

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +S HNLNYW++GDY+GIG GAHS++      V     KHP ++L      G 
Sbjct: 282 SAYARTHRQSRHNLNYWQFGDYLGIGAGAHSKLSFPERIVRQMRYKHPATYLAQT-AAGA 340

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECE-RNLQRQGFIER 370
            + E+  +       EF++  LRL +G  V  +    G  +  IE      +R+G I R
Sbjct: 341 PIQEQHEVGVRDLPFEFMLNALRLTQGFPVHRFIERTGLTMTSIEPALAQAERRGLIRR 399


>gi|255321256|ref|ZP_05362422.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter radioresistens SK82]
 gi|262380058|ref|ZP_06073213.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255301810|gb|EET81061.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter radioresistens SK82]
 gi|262298252|gb|EEY86166.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 384

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/379 (36%), Positives = 209/379 (55%), Gaps = 16/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH V   K+    ++ ++Q+ + + +        R + SI
Sbjct: 11  LSLYIHMPWCVRKCPYCDFNSHAVPDGKLSLELEQEYLQALVEDFKTQLHFAQGRKLHSI 70

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI       +   +          EIT+EANP +VE + F GY  AG+NR+S
Sbjct: 71  FIGGGTPSLISASGYQWLFQQLNGLLPFEEQCEITLEANPGTVEHDPFAGYLAAGINRLS 130

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+  EQ L+ LGR H+A  AI AIH A+   F R++ DL++ LP+QT+ Q   +L+ 
Sbjct: 131 IGVQTFNEQHLKQLGRIHSAENAINAIHQAQEAGFKRINIDLMHGLPQQTLEQALTDLRM 190

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+     H+S YQLTIE  T+F++       VLP ENV   +    ++   AHG   YEI
Sbjct: 191 AVENGATHISWYQLTIEPNTVFFRTQP----VLPVENVLEHIQEQGEAYLKAHGFIQYEI 246

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           S  ++   E S HN+NYW++GDY+ IG GAH++V +          + P+ +L  +    
Sbjct: 247 S--AWRKEEPSAHNMNYWQFGDYLAIGAGAHAKVSLQDGVYRFQKTRLPKDYLAKIPAE- 303

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERV 371
           H   +K  +  E    EF+M  LRL EG+  + +    G  L+ I+ + +  RQ  +   
Sbjct: 304 HLQFKK--IEPEDMPFEFMMNALRLNEGVPARFYNERTGYELEKIQPKLDSLRQRHLFSE 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
              +L CT  G   L+SV+
Sbjct: 362 NTEQLACTAHGHLFLNSVL 380


>gi|331664538|ref|ZP_08365444.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
 gi|331058469|gb|EGI30450.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
          Length = 378

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + ++LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQMLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|293416216|ref|ZP_06658856.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291432405|gb|EFF05387.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 378

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQSREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSTYTGLCEDV 337


>gi|91212337|ref|YP_542323.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117625182|ref|YP_854170.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218559946|ref|YP_002392859.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|237706392|ref|ZP_04536873.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|91073911|gb|ABE08792.1| hypothetical protein YggW [Escherichia coli UTI89]
 gi|115514306|gb|ABJ02381.1| putative coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218366715|emb|CAR04472.1| putative oxidoreductase [Escherichia coli S88]
 gi|226899432|gb|EEH85691.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|294493400|gb|ADE92156.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli IHE3034]
 gi|307625471|gb|ADN69775.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315289497|gb|EFU48892.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 110-3]
 gi|323951607|gb|EGB47482.1| radical SAM superfamily protein [Escherichia coli H252]
 gi|323957321|gb|EGB53043.1| radical SAM superfamily protein [Escherichia coli H263]
          Length = 378

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/336 (37%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           S  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 SKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|323669736|emb|CBJ94860.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella bongori]
          Length = 378

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 191/335 (57%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAGAQGREVKTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSGRAMQTLLDGVRARLNLAVDAEITMEANPGTVEADRFVDYQRAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  L+ LGR H   EA  A +LA  +  R  + DL++ LP QT+ +   +L++A++ 
Sbjct: 127 SFSEPKLKKLGRIHGPKEAKRAANLASGLALRSFNLDLMHGLPDQTLEEALNDLRQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  + 
Sbjct: 243 KSGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYLE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +  +    +  EF M   RL E     ++    G
Sbjct: 298 SQREVEDADKPFEFFMNRFRLLEAAPRAEFSQYTG 332


>gi|153001559|ref|YP_001367240.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS185]
 gi|151366177|gb|ABS09177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS185]
          Length = 388

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 199/344 (57%), Gaps = 11/344 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF GG
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIGG 76

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AG+ R+S+GVQ
Sbjct: 77  GTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGVQ 136

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA +AA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 137 SFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 197 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQKLAALGYEQYEISAYA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L       +  
Sbjct: 253 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNYT 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E
Sbjct: 309 FESIEVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTE 352


>gi|300928102|ref|ZP_07143647.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 187-1]
 gi|300463868|gb|EFK27361.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 187-1]
          Length = 378

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 187/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE N F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEANRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|262042607|ref|ZP_06015763.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040041|gb|EEW41156.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 378

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAHYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++    G
Sbjct: 302 VEEADKPF--------EFFMNRFRLLEAAPRAEFSRYTG 332


>gi|319427159|gb|ADV55233.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           putrefaciens 200]
          Length = 387

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/382 (35%), Positives = 213/382 (55%), Gaps = 16/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R + +IF GG
Sbjct: 16  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLAQGRQVHTIFIGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL + + I  IL+G       S N+EIT+EANP ++E ++F  YR AG+ R+S+GVQ
Sbjct: 76  GTPSLFDAKQIKRILEGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA IAA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 136 SFAKDKLNLLGRIHDQNEAKIAAQKASQAKYLSFNLDLMHGLPNQSFDEAMADIDTAAAL 195

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 196 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQRLAALGYEQYEISAYA 251

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L     +    
Sbjct: 252 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEQNRIIRTVKIKHPKGYL----SSNQYT 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
           VE   ++ E +A E+LM  LRL   I  +++E   G     L    E+  QR    E  +
Sbjct: 308 VELTEVAEEDRALEYLMNRLRLMTPIPKQEFEQRTGLHRETLSEGMEKAKQRGLLTESAE 367

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
           + +L  T +G   ++ ++    
Sbjct: 368 YWQL--TPKGHMFVNDLLTQFC 387


>gi|300940763|ref|ZP_07155309.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 21-1]
 gi|300454463|gb|EFK17956.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 21-1]
          Length = 378

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|294634377|ref|ZP_06712914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Edwardsiella tarda ATCC 23685]
 gi|291092185|gb|EFE24746.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Edwardsiella tarda ATCC 23685]
          Length = 376

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/336 (36%), Positives = 194/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++ Q+ ++   L ++         R++S++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPQQAYVDHLLADLDQELPRVAGRTLSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +LDG+     ++++ EIT+EANP +VE   F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLFSGEALQRLLDGVRARLPLAADAEITMEANPGTVEAERFSAYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EAIAA  LA ++  R  + DL++ LP+Q+  +   +L++A++
Sbjct: 126 QSFSADKLQRLGRIHGPQEAIAAAQLASSLGLRSFNLDLMHGLPQQSQQEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   +++     +  A+G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPPR----LPDDDALWEIFEQGDRLLRANGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+    + +HP  +++     G+ +
Sbjct: 242 ALAGRQCQHNLNYWRFGDYLGIGCGAHGKLTFVDGRIERRAKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +++ ++   +  EF M   RL E     D+    G
Sbjct: 297 DQQQQVTLADRPFEFFMNRFRLLEPAPRADFTAYTG 332


>gi|290511358|ref|ZP_06550727.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
 gi|289776351|gb|EFD84350.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
          Length = 378

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +    +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPDFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++    G
Sbjct: 302 VEEADKPF--------EFFMNRFRLLEAAPRAEFSRYTG 332


>gi|300925049|ref|ZP_07140967.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 182-1]
 gi|301027720|ref|ZP_07191030.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 196-1]
 gi|299879156|gb|EFI87367.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 196-1]
 gi|300418795|gb|EFK02106.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 182-1]
          Length = 378

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|153870909|ref|ZP_02000207.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
 gi|152072622|gb|EDN69790.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
          Length = 322

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 180/295 (61%), Gaps = 11/295 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH     + + ++I +   +++        R++ SIF GG
Sbjct: 9   LSLYIHIPWCVRKCPYCDFNSHEISEPMPESDYIAALFADLEQDLPRVWGRTVRSIFIGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++ P++I  +L G+     V +N EIT+EANP +V+ + F G+RKAG+NR+SLG+Q
Sbjct: 69  GTPSVLSPESIDDLLSGVRARIPVIANAEITLEANPGTVDSDRFNGFRKAGINRLSLGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  + +L+ LGR H   EA+ AI  A+   F  ++ DL++ LP QT+     +LQ A+++
Sbjct: 129 SFNDNALQSLGRIHGRKEALLAIEAAKQAGFQNINLDLMFGLPGQTLDAALEDLQTAVAF 188

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  TLFY         L  +++  D+    Q+  +A G + YEIS ++
Sbjct: 189 QPFHISWYQLTIEPNTLFYHQPP----ALSDDDLLWDMQTAGQTYLAAQGYYHYEISAYA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAH------SRVKVGSHRVAISIEKHPESWLK 306
               +  HNLNYW++GDY+GIG GAH      S++  G      S ++HP ++L+
Sbjct: 245 KPAQQCQHNLNYWKFGDYLGIGAGAHAKITNTSKINFGLQITRFSKQRHPRTYLQ 299


>gi|330998694|ref|ZP_08322423.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parasutterella excrementihominis YIT 11859]
 gi|329576433|gb|EGG57945.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parasutterella excrementihominis YIT 11859]
          Length = 351

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/324 (36%), Positives = 182/324 (56%), Gaps = 6/324 (1%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R + SIFFGGGTPSL+ P+ I  I++    N     N+EIT+EANP + E   F+ +R+A
Sbjct: 28  RKLKSIFFGGGTPSLMAPETIGRIIEAADNNIPFHENIEITLEANPGTFEEQKFKDFREA 87

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GVNR+S+G+QS ++  LR LGR HN+ EA  A   A  IF   + DL++ LP QT+ + +
Sbjct: 88  GVNRLSIGIQSFDDAKLRALGRVHNSQEARRAAESAGKIFENFNLDLMFGLPGQTIQELD 147

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            EL+ A S+   HLS YQLT+E  T F K    G   +P ++V  D+ +L +  T+A G 
Sbjct: 148 EELETAFSFGSTHLSCYQLTLEPNTYFAKFPPKG---IPDDDVLSDMSDLVRDKTAARGF 204

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+S ++  G    HNLNYW +GDY  +GPGAH ++ +          + P  WL   
Sbjct: 205 DHYEVSAYAKGGYRCRHNLNYWEFGDYFAVGPGAHGKITIQGRPERFYNYRDPARWLLSF 264

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
           +++   + E++ +  E    EF++  LRLREG+    +    G + D+       L+ +G
Sbjct: 265 KEHQTQIAERKLIDPEDLPFEFMLNALRLREGVPFDFYTERTGLDFDVIESIWTELREKG 324

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +      R++ T++G   L+ V+
Sbjct: 325 LVCD-HLKRIKTTEKGWLFLNEVL 347


>gi|311278128|ref|YP_003940359.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
 gi|308747323|gb|ADO47075.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
          Length = 377

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 187/324 (57%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + SIF G
Sbjct: 5   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLADLDNETAYAQGRDVKSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 65  GGTPSLLSGAAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 125 QSFSEPKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 185 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G  +
Sbjct: 241 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTTKTRHPRGYMQ-----GRYL 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  +    +  EF M   RL E
Sbjct: 296 ENQRDVDDADKPFEFFMNRFRLLE 319


>gi|237654672|ref|YP_002890986.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T]
 gi|237625919|gb|ACR02609.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp.
           MZ1T]
          Length = 407

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 208/384 (54%), Gaps = 17/384 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +    L +YVH+P+CVKKCPYCDFNSH  R   + ++ ++ + L ++Q        R + 
Sbjct: 28  EAPPPLSLYVHFPWCVKKCPYCDFNSHAPREGGIPEQAWLGAVLADLQHALPQVWGRRVH 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL+    +  +L GI     +    EIT+EANP +VE   F+ YR AGVNR
Sbjct: 88  SVFIGGGTPSLMSATTLDGLLTGIRMLLPLDPLAEITLEANPGTVEAGRFRDYRAAGVNR 147

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLG+QS ++  L  +GR H   EA  AI  AR  F R++ DL+YALP QT+     +L+
Sbjct: 148 LSLGIQSFDDAMLAKIGRIHGGEEARRAIEAARTHFERVNLDLMYALPGQTLDMALADLE 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+ + V HLS Y LT+E  T F             ++ A D+    ++  +A G   YE
Sbjct: 208 TAIGFGVQHLSCYHLTLEPNTPFAHDPPPLP----DDDTAADMQEAIEARLAAAGFTHYE 263

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE---KHPESWLKMVR 309
            S  +    +S HNLNYW +GDY+G+GPGAH   K+ SH   I  E   KHP  +L+   
Sbjct: 264 TSAFARPHEQSRHNLNYWTFGDYLGLGPGAHG--KLSSHE-GIRREMRHKHPGRYLEGAA 320

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQG 366
           ++   + E   +S  +   EF+M  LRL EG+  K +    G  ++    E  R  +R G
Sbjct: 321 RSDF-IQEAREVSVAELPFEFMMNALRLTEGVPAKLFAARTGVPIEAITDELARARER-G 378

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            ++     +LR T +G   L+ ++
Sbjct: 379 LLDTAD-GKLRPTLQGRRFLNELL 401


>gi|325498512|gb|EGC96371.1| coproporphyrinogen III oxidase [Escherichia fergusonii ECD227]
          Length = 378

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
                + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESLRDVEATDKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDV 337


>gi|170766060|ref|ZP_02900871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia albertii TW07627]
 gi|170125206|gb|EDS94137.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia albertii TW07627]
          Length = 378

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 187/324 (57%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLTLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH ++     R+  I+  +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKITFSDGRILRITKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVETADKPFEFFMNRFRLLE 320


>gi|331684582|ref|ZP_08385174.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
 gi|331078197|gb|EGI49403.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
          Length = 378

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|113460270|ref|YP_718328.1| coproporphyrinogen III oxidase [Haemophilus somnus 129PT]
 gi|112822313|gb|ABI24402.1| coproporphyrinogen III oxidase, anaerobic [Haemophilus somnus
           129PT]
          Length = 392

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 203/357 (56%), Gaps = 24/357 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + +  ++   LT+++            R + SI
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHAQKGSIPETEYVTHLLTDLKQDLVRYHASIANRKLHSI 76

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   Q+I  +L+ I +      N+EIT+E+NP + E + F GY +AGVNRIS
Sbjct: 77  FIGGGTPSLFSVQSIDYLLNQIKQLIPFEDNIEITLESNPVTAESDRFVGYAQAGVNRIS 136

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS   + L+ LGR HNA EA +A+  A++      + DL++ LP Q++ Q   +LQ+
Sbjct: 137 IGIQSFNNEKLQRLGRAHNAVEAKSAVRFAQHSGLNSFNLDLMHGLPNQSLVQALDDLQQ 196

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A++    HLS YQLTIE  T+F Y+  K     LP E+   D++     + S  G   YE
Sbjct: 197 AIALKPPHLSWYQLTIEPNTMFAYRPPK-----LPDEDELWDIFEQGHQLLSKAGYQQYE 251

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++ +  +  HNLNYWR+GDY+ IG GAH ++     ++   S  KHP+ +++     
Sbjct: 252 TSAYAKVDFQCQHNLNYWRFGDYLAIGCGAHGKLSFADGQILRFSKTKHPKGYMR----- 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-------RNLDIECERN 361
           G  + E++ +   ++  EF M   RL E +  + +E+L G       + +D   E+N
Sbjct: 307 GEYLYEEKNIPFSERPFEFFMNRFRLLEPMEKQQFELLTGLAQSAVEKQIDWALEKN 363


>gi|324115030|gb|EGC08995.1| radical SAM superfamily protein [Escherichia fergusonii B253]
          Length = 378

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
                + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESLRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDV 337


>gi|254162865|ref|YP_003045973.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|297520257|ref|ZP_06938643.1| coproporphyrinogen III oxidase [Escherichia coli OP50]
 gi|242378481|emb|CAQ33265.1| predicted oxidoreductase [Escherichia coli BL21(DE3)]
 gi|253974766|gb|ACT40437.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|253978932|gb|ACT44602.1| coproporphyrinogen III oxidase [Escherichia coli BL21(DE3)]
 gi|323971758|gb|EGB66985.1| radical SAM superfamily protein [Escherichia coli TA007]
 gi|324005511|gb|EGB74730.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 57-2]
          Length = 378

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|218550202|ref|YP_002383993.1| coproporphyrinogen III oxidase [Escherichia fergusonii ATCC 35469]
 gi|218357743|emb|CAQ90387.1| putative oxidoreductase [Escherichia fergusonii ATCC 35469]
 gi|323966472|gb|EGB61905.1| radical SAM superfamily protein [Escherichia coli M863]
 gi|327251723|gb|EGE63409.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli STEC_7v]
          Length = 378

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
                + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESLRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDV 337


>gi|323978750|gb|EGB73831.1| radical SAM superfamily protein [Escherichia coli TW10509]
          Length = 378

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVETADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|82778273|ref|YP_404622.1| coproporphyrinogen III oxidase [Shigella dysenteriae Sd197]
 gi|309785217|ref|ZP_07679848.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella dysenteriae 1617]
 gi|81242421|gb|ABB63131.1| putative oxidase [Shigella dysenteriae Sd197]
 gi|308926337|gb|EFP71813.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella dysenteriae 1617]
          Length = 378

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAHAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSAYTGLCEDV 337


>gi|218706470|ref|YP_002413989.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293406462|ref|ZP_06650388.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298382199|ref|ZP_06991796.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300900228|ref|ZP_07118412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 198-1]
 gi|218433567|emb|CAR14470.1| putative oxidoreductase [Escherichia coli UMN026]
 gi|291426468|gb|EFE99500.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298277339|gb|EFI18855.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300356244|gb|EFJ72114.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 198-1]
          Length = 378

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPEQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|261495031|ref|ZP_05991498.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309273|gb|EEY10509.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 385

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 18/347 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++ +I+  L ++       R   G R + SI
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHLLADLSQDLTAYRVAIGDRKLYSI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + IA +L  + K      N+EIT+EANP + E   F GY + GV RIS
Sbjct: 68  FIGGGTPSLFSAEGIAYLLSEVEKRIAFEPNIEITLEANPGTAEAERFLGYAQGGVTRIS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEME 190
           +G+QS E + L  LGR H+A+EA  AI  A+N         + DL++ LP Q++ Q  ++
Sbjct: 128 MGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNSAKSGLQSFNIDLMHGLPNQSVKQALVD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  +S    HLS YQLTIE  T+FY         LP ++   D++     + +  G   
Sbjct: 188 LETGISLNPPHLSWYQLTIEPNTMFYYRKP----TLPDDDELWDIFEQGHQLLTNAGYEQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 244 YETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR--- 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             G     ++ +  + +  EF M   RL E    +++E   G + +I
Sbjct: 301 --GEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQEFEWFTGLDREI 345


>gi|167837504|ref|ZP_02464387.1| coproporphyrinogen III oxidase [Burkholderia thailandensis MSMB43]
          Length = 405

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/341 (36%), Positives = 197/341 (57%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISS 73
            L +YVH+P+CV+KCPYCDFNSH   +K G    + +++ +   +++    L   R + +
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSH--EWKDGGALPERDYLGALRADLEHALPLVWGRQVHT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+
Sbjct: 86  VFIGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E  L+ LGR H+A++A AA  +A   F   + DL++ALP QT+ +   +L+ 
Sbjct: 146 SIGIQSFSEAHLKALGRIHDATQARAAAEIAARTFDNFNLDLMFALPNQTLDECRADLET 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+
Sbjct: 206 ALSFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDTSADMQDWLHERTAQAGYARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++   K G 
Sbjct: 262 SAYAKPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQA-KAGA 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           AV E+  +       EF++  LRL EG+    +    G +L
Sbjct: 321 AVQEEREVGPHDLPFEFMLNALRLVEGVPTHSFAERTGMSL 361


>gi|261493806|ref|ZP_05990320.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261310509|gb|EEY11698.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 385

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 18/347 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++ +I+  L ++       R   G R + SI
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHLLADLSQDLTAYRVAIGDRKLYSI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + IA +L  + K      N+EIT+EANP + E   F GY + GV RIS
Sbjct: 68  FIGGGTPSLFSAEGIAYLLSEVEKRIAFEPNIEITLEANPGTAEAERFLGYAQGGVTRIS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEME 190
           +G+QS E + L  LGR H+A+EA  AI  A+N         + DL++ LP Q++ Q  ++
Sbjct: 128 MGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNSAKSGLQSFNIDLMHGLPNQSVKQALVD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  +S    HLS YQLTIE  T+FY         LP ++   D++     + +  G   
Sbjct: 188 LETGISLNPPHLSWYQLTIEPNTMFYYRKP----TLPDDDELWDIFEQGHQLLTNAGYEQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 244 YETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR--- 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             G     ++ +  + +  EF M   RL E    +++E   G + +I
Sbjct: 301 --GEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQEFEWFTGLDREI 345


>gi|331674434|ref|ZP_08375194.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
 gi|331068528|gb|EGI39923.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
          Length = 378

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 MNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEATDKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|170718310|ref|YP_001785323.1| coproporphyrinogen III oxidase [Haemophilus somnus 2336]
 gi|168826439|gb|ACA31810.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Haemophilus somnus 2336]
          Length = 392

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 203/357 (56%), Gaps = 24/357 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + +  ++   LT+++            R + SI
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHAQKGLIPETEYVTHLLTDLKQDLVRYHASIADRKLHSI 76

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   Q+I  +L+ I +      N+EIT+E+NP + E + F GY +AGVNRIS
Sbjct: 77  FIGGGTPSLFSVQSIDYLLNQIKQLIPFEDNIEITLESNPVTAESDRFVGYAQAGVNRIS 136

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS   + L+ LGR HNA EA +A+  A++      + DL++ LP Q++ Q   +LQ+
Sbjct: 137 IGIQSFNNEKLQRLGRAHNAVEAKSAVRFAQHSGLNSFNLDLMHGLPNQSLVQALDDLQQ 196

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A++    HLS YQLTIE  T+F Y+  K     LP E+   D++     + S  G   YE
Sbjct: 197 AIALKPPHLSWYQLTIEPNTMFAYRPPK-----LPDEDELWDIFEQGHQLLSKAGYQQYE 251

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKN 311
            S ++ +  +  HNLNYWR+GDY+ IG GAH ++     ++   S  KHP+ +++     
Sbjct: 252 TSAYAKVDFQCQHNLNYWRFGDYLAIGCGAHGKLSFADGQILRFSKTKHPKGYMR----- 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-------RNLDIECERN 361
           G  + E++ +   ++  EF M   RL E +  + +E+L G       + +D   E+N
Sbjct: 307 GEYLYEEKNIPFSERPFEFFMNRFRLLEPMEKQQFELLTGLAQSAVQKQIDWALEKN 363


>gi|332527982|ref|ZP_08404016.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rubrivivax benzoatilyticus JA2]
 gi|332112556|gb|EGJ12349.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rubrivivax benzoatilyticus JA2]
          Length = 405

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 208/379 (54%), Gaps = 13/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            L +Y+H P+C++KCPYCDFNSH     R     Q  ++ + + +++    L   R + S
Sbjct: 25  PLSLYLHVPWCLRKCPYCDFNSHELGGGRPDAALQSRYVAALIADLEAALPLVWGRPVIS 84

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+EP  +  +L  +     +    EIT+EANP + E   F  +R AGV R+
Sbjct: 85  VFIGGGTPSLLEPAMVDRLLAAVRARLPLEPGCEITLEANPGTFERERFAAFRAAGVTRL 144

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+GVQS ++ +L  +GR H+ ++A AA+  A   F   + DL+YALP Q +     +L  
Sbjct: 145 SVGVQSFDDAALAAIGRVHDGAQARAALEEAARAFDTFNLDLMYALPGQDLAALARDLDT 204

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+A  HLS+Y L++E  T F     +G   LP +++A D+ +L    T+A GL  YE+
Sbjct: 205 ALSFAPPHLSIYHLSLEPNTRFATRPPEG---LPDDDLASDMLDLIAERTAASGLARYEV 261

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S  +  G   +HN NYW +GDY+G+G GAH ++      V     + P+++++     GH
Sbjct: 262 SAFARPGHRCVHNQNYWHFGDYLGLGAGAHGKLSFAERVVRQVRWREPQAYVEQALA-GH 320

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGIS---VKDWEMLAGRNLDIECERNLQRQGFIER 370
           AV  +  + + +   EF++  LRLREG       +   L+   L+    + L R G +ER
Sbjct: 321 AVSNEHEVGAAELPFEFMLNALRLREGFEPGLFAERTGLSPTALEPGLTQALAR-GLLER 379

Query: 371 VQFSRLRCTQRGMTMLDSV 389
            Q +RL  T RG   L  +
Sbjct: 380 -QGTRLVPTVRGFDFLSDL 397


>gi|15833085|ref|NP_311858.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168747553|ref|ZP_02772575.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4113]
 gi|168753907|ref|ZP_02778914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168760097|ref|ZP_02785104.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168766962|ref|ZP_02791969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168773406|ref|ZP_02798413.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4196]
 gi|168781814|ref|ZP_02806821.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4076]
 gi|168785813|ref|ZP_02810820.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC869]
 gi|168797530|ref|ZP_02822537.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC508]
 gi|195937093|ref|ZP_03082475.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808361|ref|ZP_03250698.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814432|ref|ZP_03255761.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820028|ref|ZP_03260348.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209398861|ref|YP_002272435.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217327366|ref|ZP_03443449.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254794907|ref|YP_003079744.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261226267|ref|ZP_05940548.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256475|ref|ZP_05949008.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK966]
 gi|291284276|ref|YP_003501094.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O55:H7 str. CB9615]
 gi|13363303|dbj|BAB37254.1| putative oxidase [Escherichia coli O157:H7 str. Sakai]
 gi|187770940|gb|EDU34784.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188017808|gb|EDU55930.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189000657|gb|EDU69643.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189358465|gb|EDU76884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363639|gb|EDU82058.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369451|gb|EDU87867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4501]
 gi|189374207|gb|EDU92623.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC869]
 gi|189379632|gb|EDU98048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC508]
 gi|208728162|gb|EDZ77763.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735709|gb|EDZ84396.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740151|gb|EDZ87833.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209160261|gb|ACI37694.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4115]
 gi|209760008|gb|ACI78316.1| putative oxidase [Escherichia coli]
 gi|209760010|gb|ACI78317.1| putative oxidase [Escherichia coli]
 gi|209760012|gb|ACI78318.1| putative oxidase [Escherichia coli]
 gi|209760014|gb|ACI78319.1| putative oxidase [Escherichia coli]
 gi|209760016|gb|ACI78320.1| putative oxidase [Escherichia coli]
 gi|217319733|gb|EEC28158.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254594307|gb|ACT73668.1| predicted oxidoreductase [Escherichia coli O157:H7 str. TW14359]
 gi|290764149|gb|ADD58110.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O55:H7 str. CB9615]
 gi|320189304|gb|EFW63963.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640601|gb|EFX10140.1| HemN family oxidoreductase [Escherichia coli O157:H7 str. G5101]
 gi|320645848|gb|EFX14833.1| HemN family oxidoreductase [Escherichia coli O157:H- str. 493-89]
 gi|320651148|gb|EFX19588.1| HemN family oxidoreductase [Escherichia coli O157:H- str. H 2687]
 gi|320656644|gb|EFX24540.1| HemN family oxidoreductase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662163|gb|EFX29564.1| HemN family oxidoreductase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667238|gb|EFX34201.1| HemN family oxidoreductase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338957|gb|EGD62772.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044]
 gi|326343161|gb|EGD66929.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125]
          Length = 378

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGSAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSAYTGLCEDV 337


>gi|110643104|ref|YP_670834.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|191171779|ref|ZP_03033325.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli F11]
 gi|110344696|gb|ABG70933.1| hypothetical protein YggW [Escherichia coli 536]
 gi|190907814|gb|EDV67407.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli F11]
 gi|324011794|gb|EGB81013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 60-1]
          Length = 378

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|218701665|ref|YP_002409294.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|301027294|ref|ZP_07190640.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 69-1]
 gi|312964782|ref|ZP_07779022.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 2362-75]
 gi|218371651|emb|CAR19490.1| putative oxidoreductase [Escherichia coli IAI39]
 gi|300395100|gb|EFJ78638.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 69-1]
 gi|312290338|gb|EFR18218.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 2362-75]
          Length = 378

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|194431586|ref|ZP_03063877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shigella dysenteriae 1012]
 gi|194419942|gb|EDX36020.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shigella dysenteriae 1012]
 gi|320181040|gb|EFW55961.1| coproporphyrinogen III oxidase [Shigella boydii ATCC 9905]
 gi|332086884|gb|EGI92020.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella boydii 5216-82]
 gi|332087624|gb|EGI92751.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella dysenteriae 155-74]
          Length = 378

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|222034650|emb|CAP77392.1| Oxygen-independent coproporphyrinogen III oxidase-like [Escherichia
           coli LF82]
 gi|312947486|gb|ADR28313.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 378

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|215488253|ref|YP_002330684.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266325|emb|CAS10756.1| predicted oxidoreductase [Escherichia coli O127:H6 str. E2348/69]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEAFGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|26249376|ref|NP_755416.1| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|300980107|ref|ZP_07174850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 45-1]
 gi|301049250|ref|ZP_07196223.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 185-1]
 gi|26109784|gb|AAN81989.1|AE016766_77 Hypothetical protein yggW [Escherichia coli CFT073]
 gi|300298946|gb|EFJ55331.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 185-1]
 gi|300409364|gb|EFJ92902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 45-1]
 gi|315293931|gb|EFU53283.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 153-1]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/336 (37%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDGI     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGIRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFLDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|332999702|gb|EGK19287.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri VA-6]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRSRLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|320195074|gb|EFW69703.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFNEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|24114210|ref|NP_708720.1| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 301]
 gi|30064271|ref|NP_838442.1| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 2457T]
 gi|74313512|ref|YP_311931.1| coproporphyrinogen III oxidase [Shigella sonnei Ss046]
 gi|300921297|ref|ZP_07137666.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 115-1]
 gi|24053357|gb|AAN44427.1| putative oxidase [Shigella flexneri 2a str. 301]
 gi|30042528|gb|AAP18252.1| putative oxidase [Shigella flexneri 2a str. 2457T]
 gi|73856989|gb|AAZ89696.1| putative oxidase [Shigella sonnei Ss046]
 gi|281602291|gb|ADA75275.1| putative Coproporphyrinogen III oxidase-like Fe-S oxidoreductase
           [Shigella flexneri 2002017]
 gi|300411759|gb|EFJ95069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 115-1]
 gi|313648005|gb|EFS12451.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri 2a str. 2457T]
 gi|323167993|gb|EFZ53682.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella sonnei 53G]
 gi|332752998|gb|EGJ83382.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri 4343-70]
 gi|332753799|gb|EGJ84178.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-671]
 gi|332754707|gb|EGJ85073.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri 2747-71]
 gi|332765372|gb|EGJ95590.1| radical SAM superfamily protein [Shigella flexneri 2930-71]
 gi|333000286|gb|EGK19869.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-218]
 gi|333000457|gb|EGK20038.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-272]
 gi|333015144|gb|EGK34487.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-304]
 gi|333015295|gb|EGK34637.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-227]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|262280818|ref|ZP_06058601.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257718|gb|EEY76453.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 384

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 216/384 (56%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASIPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSSELEQTYLKALVADFETQLEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  Q    +   +          EIT+EANP +VE + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAQGYVWLFAELKSLLKFEDGCEITLEANPGTVEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQS +   L+ LGR H+A+ AI AI  A+   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQSFDTNHLQKLGRIHSANNAIEAIQQAKQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ A+     H+S YQLTIE  T+F++       VLP + +  D+    ++   A+G  
Sbjct: 187 DLQLAVESGATHISWYQLTIEPNTVFFRTQP----VLPQDEMLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KELPSTHNLNYWEFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQ-RQG 366
              H  ++K  + +E+   EF+M  LRL +G+  + +E   G +L+   E   +L+ R+ 
Sbjct: 302 AE-HLQMKK--IEAEELPFEFMMNALRLNDGVKAELYEQRTGLSLESLNEVLTSLRARKL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            ++ V  SRL CT++G   L+SV+
Sbjct: 359 LVDDV--SRLACTEQGHIFLNSVL 380


>gi|300995464|ref|ZP_07181112.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 200-1]
 gi|300304826|gb|EFJ59346.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 200-1]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|170681312|ref|YP_001745116.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170519030|gb|ACB17208.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli SMS-3-5]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQSREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFLDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVDAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|16130856|ref|NP_417430.1| predicted oxidoreductase, HemN family [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109732|ref|AP_003512.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. W3110]
 gi|170082507|ref|YP_001731827.1| oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
 gi|188492406|ref|ZP_02999676.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 53638]
 gi|238902077|ref|YP_002927873.1| putative oxidoreductase [Escherichia coli BW2952]
 gi|253772207|ref|YP_003035038.1| coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300947686|ref|ZP_07161855.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 116-1]
 gi|300954198|ref|ZP_07166663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 175-1]
 gi|301643691|ref|ZP_07243730.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 146-1]
 gi|307139640|ref|ZP_07498996.1| coproporphyrinogen III oxidase [Escherichia coli H736]
 gi|331643648|ref|ZP_08344779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H736]
 gi|1723868|sp|P52062|YGGW_ECOLI RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein YggW
 gi|882484|gb|AAA69122.1| ORF_o378 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789325|gb|AAC75992.1| predicted oxidoreductase, HemN family [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675765|dbj|BAE77018.1| predicted oxidoreductase [Escherichia coli str. K12 substr. W3110]
 gi|169890342|gb|ACB04049.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
 gi|188487605|gb|EDU62708.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 53638]
 gi|238862748|gb|ACR64746.1| predicted oxidoreductase [Escherichia coli BW2952]
 gi|253323251|gb|ACT27853.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260448002|gb|ACX38424.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           DH1]
 gi|284922898|emb|CBG35987.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 042]
 gi|300318782|gb|EFJ68566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 175-1]
 gi|300452732|gb|EFK16352.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 116-1]
 gi|301077893|gb|EFK92699.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 146-1]
 gi|309703310|emb|CBJ02646.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli ETEC H10407]
 gi|315137552|dbj|BAJ44711.1| coproporphyrinogen III oxidase [Escherichia coli DH1]
 gi|315614883|gb|EFU95521.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 3431]
 gi|323936042|gb|EGB32337.1| radical SAM superfamily protein [Escherichia coli E1520]
 gi|331037119|gb|EGI09343.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H736]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEATDKPFEFFMNRFRLLEA 321


>gi|292490865|ref|YP_003526304.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           halophilus Nc4]
 gi|291579460|gb|ADE13917.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           halophilus Nc4]
          Length = 385

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/370 (35%), Positives = 210/370 (56%), Gaps = 13/370 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH    +  +  +I + + +++        R I SIF GG
Sbjct: 10  LALYIHLPWCVRKCPYCDFNSHPLPEEFPETAYIDALIRDLEQDLPRIWGRRIHSIFMGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  P+++  +L  +    + +  +EIT+EANP +VE   F  +R  G+NR+SLG+Q
Sbjct: 70  GTPSLFSPESLDRLLSALRARLSWAPQMEITLEANPGTVEQGRFTEFRSLGINRLSLGIQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +++L+ LGR H++ EA  AI +A    F  ++ DL++ LP QT TQ   ++  A+S+
Sbjct: 130 SFNDEALKNLGRIHSSQEACQAIAMAHTAGFDNINLDLMFGLPGQTETQALADITTAISF 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA-YEISNH 256
           A  H+S YQLTIE  T FY+        LPSE   +D +         HG +  YE+S  
Sbjct: 190 APSHISHYQLTIEPHTYFYRYPPS----LPSEE-GIDTWQEACQAQLTHGGYGRYEVSAF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVA-ISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++     +R+  I   KHP ++L         
Sbjct: 245 AKKGRQCQHNLNYWRFGDYLGIGAGAHGKISDAMENRITRIWKIKHPSAYLTKA-GTAEG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ-- 372
           +  +  LS ++ A EF++  LRL  G   + ++   G  + +  E+ L +   +E ++  
Sbjct: 304 IGGETILSPQEAAFEFMLNALRLTGGFPSRLFQERVGLPISV-VEKALHQAETLELIEWD 362

Query: 373 FSRLRCTQRG 382
           F ++R T++G
Sbjct: 363 FQQIRPTEKG 372


>gi|227888510|ref|ZP_04006315.1| coproporphyrinogen oxidase [Escherichia coli 83972]
 gi|227834779|gb|EEJ45245.1| coproporphyrinogen oxidase [Escherichia coli 83972]
 gi|307554937|gb|ADN47712.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli ABU 83972]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|331648710|ref|ZP_08349798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
 gi|330908990|gb|EGH37504.1| radical SAM family enzyme [Escherichia coli AA86]
 gi|331042457|gb|EGI14599.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 187/324 (57%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|218555514|ref|YP_002388427.1| coproporphyrinogen III oxidase [Escherichia coli IAI1]
 gi|218696553|ref|YP_002404220.1| coproporphyrinogen III oxidase [Escherichia coli 55989]
 gi|293449285|ref|ZP_06663706.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|300824810|ref|ZP_07104914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 119-7]
 gi|331669701|ref|ZP_08370547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA271]
 gi|331678949|ref|ZP_08379623.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H591]
 gi|218353285|emb|CAU99248.1| putative oxidoreductase [Escherichia coli 55989]
 gi|218362282|emb|CAQ99903.1| putative oxidoreductase [Escherichia coli IAI1]
 gi|291322375|gb|EFE61804.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|300522717|gb|EFK43786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 119-7]
 gi|323946547|gb|EGB42570.1| radical SAM superfamily protein [Escherichia coli H120]
 gi|331063369|gb|EGI35282.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA271]
 gi|331073779|gb|EGI45100.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H591]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|167947580|ref|ZP_02534654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 278

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 115/272 (42%), Positives = 166/272 (61%), Gaps = 5/272 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  R  + +  +I + L +++   + TG R + SIF GG
Sbjct: 8   LSLYIHIPWCVRKCPYCDFNSHQVREALDEPPYIDALLADLEQDLKQTGGRPLHSIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  P +IA +L G+         +EIT+EANP ++E +NF GYR AGVNR+S+GVQ
Sbjct: 68  GTPSLFSPGSIAALLAGVMARVETEPELEITLEANPGTLEADNFSGYRDAGVNRLSVGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  +A+ A+  AR   F R++ DL++ LP QT      +L  AL  
Sbjct: 128 SFDTARLQALGRIHDPDQAMLAVERARQAGFSRINLDLMFGLPGQTSASAAEDLSIALKL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLT+E  T F++        LP + +  ++++  Q+  +  G   YEIS ++
Sbjct: 188 DPGHISYYQLTLEPNTHFHQFPP----ALPDDELIWEIHSQGQTCLAEAGYLQYEISAYA 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
             G    HNLNYW +GDYIGIG GAH ++  G
Sbjct: 244 RPGERCRHNLNYWCFGDYIGIGAGAHGKLTAG 275


>gi|15803494|ref|NP_289527.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933]
 gi|12517501|gb|AAG58086.1|AE005525_12 putative oxidase [Escherichia coli O157:H7 str. EDL933]
          Length = 378

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 192/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLXLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGSAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSAYTGLCEDV 337


>gi|254497840|ref|ZP_05110606.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           drancourtii LLAP12]
 gi|254352918|gb|EET11687.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           drancourtii LLAP12]
          Length = 410

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 190/328 (57%), Gaps = 8/328 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + + N++Q+ L ++         R ISSIF G
Sbjct: 38  PLSLYIHIPWCIRKCPYCDFNSHKSPEVLPEVNYVQALLADLNADLLRFNAREISSIFIG 97

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +   L+   + K    +SN+EIT+EANP SVE   F  YR+ G+NR+SLG+
Sbjct: 98  GGTPSLFSAEAYNLLFTELKKILPFASNIEITMEANPGSVEQQRFTDYRQIGINRLSLGI 157

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR H+A +A  AI  ARN  F  ++ D+++ LPKQ++ Q   +L+ ALS
Sbjct: 158 QSFNPEHLKVLGRVHDAQQAHRAIESARNAGFNNLNLDIMHGLPKQSIAQGIEDLRTALS 217

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +H S YQLTIE  T+FYK +      LPSE+ A  L     ++    G   YEIS  
Sbjct: 218 YRPEHFSWYQLTIEPNTVFYKENPP----LPSEDEAYFLEEQGFALLKEAGFTRYEISAF 273

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    ++ HNLNYW +GDY GIG GAH ++   +  +     + P+ +L + +     + 
Sbjct: 274 AKPNKQARHNLNYWLFGDYFGIGAGAHGKLTTTTEILRTRKHRQPKDYLDVAKP---FLA 330

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVK 344
             E + +++   EF++   RL + I ++
Sbjct: 331 NIELVDTKELLFEFMLNTTRLEQAIPLE 358


>gi|160876295|ref|YP_001555611.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS195]
 gi|160861817|gb|ABX50351.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS195]
 gi|315268484|gb|ADT95337.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS678]
          Length = 388

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 11/344 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q  ++ + L +++    L   R I +IF GG
Sbjct: 17  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQAAYVDALLEDLRQDLHLVQGRQIHTIFIGG 76

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 77  GTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 136

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA +AA   ++  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 137 SFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 197 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWHIYEQGQQKLAALGYEQYEISAYA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L       +  
Sbjct: 253 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNYT 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E
Sbjct: 309 FESIDVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTE 352


>gi|295097494|emb|CBK86584.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 382

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 191/339 (56%), Gaps = 17/339 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVSYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAVDAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA  +  R  +FDL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEPKLKRLGRIHGPEEAKRAANLATGLGLRSFNFDLMHGLPDQSLEEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNG 312
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++   + R++ 
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYMEGRYLERQHD 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               +K F        EF M   RL E     ++ +  G
Sbjct: 302 VEAADKPF--------EFFMNRFRLLEAAPRAEFALYTG 332


>gi|33152698|ref|NP_874051.1| coproporphyrinogen III oxidase [Haemophilus ducreyi 35000HP]
 gi|33148922|gb|AAP96440.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Haemophilus ducreyi 35000HP]
          Length = 394

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 193/356 (54%), Gaps = 27/356 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +     R I SI
Sbjct: 12  LSLYIHIPWCVQKCPYCDFNSHTQKGTIPEAEYIQHLLADLSQDLVTYKTAIANRKIHSI 71

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + IA +L  I +    +  +EIT+EANP + E   F  Y +AG+NRIS
Sbjct: 72  FIGGGTPSLFSAEAIAYLLAEIKQRIAFAPKIEITLEANPGTAEAERFICYTEAGINRIS 131

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN--IFP-------RMSFDLIYALPKQTMT 185
           +G+QS EE+ LR LGR H+A EA  A++ A+N  I P         + DL++ LP QT+ 
Sbjct: 132 MGIQSFEEEKLRKLGRIHDAHEAKQAVYFAKNALISPSRTVGLHSFNLDLMHGLPNQTLE 191

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +L  A+S    H S YQLTIE  T+FY         LP ++    ++     + + 
Sbjct: 192 QALADLNTAISLNPPHFSWYQLTIEPNTMFYYRQP----TLPDDDELWAIFEQGHQLLTM 247

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESW 304
            G   YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   S  +   S  KHP+ +
Sbjct: 248 AGYQQYETSAYAKQGFQCQHNLNYWRFGDYLAIGCGAHGKISYPSGEIYRFSKTKHPKGY 307

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           ++   ++    ++      + +  EF M   RL E    +++E   G    ++CER
Sbjct: 308 MRGDYRDSQQSIQL-----DDRPFEFFMNRFRLLEPTPKQEFECYTG----LDCER 354


>gi|88859169|ref|ZP_01133810.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas tunicata D2]
 gi|88819395|gb|EAR29209.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas tunicata D2]
          Length = 369

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/336 (38%), Positives = 195/336 (58%), Gaps = 18/336 (5%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +H P+CV+KCPYCDFNSH ++ ++ Q +++   L +++        R + SIF GGGTPS
Sbjct: 1   MHIPWCVQKCPYCDFNSHGQKGEIPQADYVAHLLADLRQDLHYAQGRKLHSIFIGGGTPS 60

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L+  Q+I+ +L GI      +  +EIT+EANP +VE   FQGY KAGVNRIS+GVQS++ 
Sbjct: 61  LMSEQSISELLHGIEALIPFNEQIEITLEANPGTVEAGRFQGYVKAGVNRISIGVQSMQN 120

Query: 143 QSLRFLGRNHNASEAIAA---IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             L+ LGR H+A+EA+ A    HLA       + DL++ LP Q++     +L++ ++   
Sbjct: 121 DKLKALGRIHDANEAVKAAEQAHLAG--LNSFNLDLMHGLPGQSIDDALSDLKQIIALQP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S YQLTIE  T F+        VLP +++  D+     +I  A G   YE+S +S  
Sbjct: 179 KHISWYQLTIEPNTQFHSKPP----VLPEDDILWDIQEQGHAILEAAGYEQYEVSGYSKA 234

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA--V 315
           G +  HNLNYWR+GDY+GIG GAH ++ + +    I  E  KHP+ +++  +   +    
Sbjct: 235 GYQCQHNLNYWRFGDYLGIGCGAHGKITLPAQNKLIRTEKVKHPKGYMEETQPYLYKQWQ 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           VE+  LS      EF M  LRL E  +   +  L G
Sbjct: 295 VEQSDLSF-----EFFMNRLRLHESCAKTAFSELTG 325


>gi|91774396|ref|YP_544152.1| coproporphyrinogen III oxidase, anaerobic [Methylobacillus
           flagellatus KT]
 gi|91708383|gb|ABE48311.1| coproporphyrinogen III oxidase, anaerobic [Methylobacillus
           flagellatus KT]
          Length = 384

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 194/337 (57%), Gaps = 5/337 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  R ++ +  ++ + + +++        R + SIFFGG
Sbjct: 12  LSLYIHIPWCVRKCPYCDFNSHESRTEIPEAAYVDALIADLEQSVPRIWGRRVHSIFFGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  P+ I  IL  +     +S + E+T+EANP +V+  +F+GYR AGVNR+SLG+Q
Sbjct: 72  GTPSLFSPKAIDRILSNVRALVPLSVDCEVTLEANPGTVDAAHFRGYRAAGVNRLSLGIQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +   L+ LGR H+ ++A+AA  LA   F  ++ D++YALP Q +     + QRA S  
Sbjct: 132 SFDSTYLQKLGRIHDEAQAMAAADLALQTFDSVNLDVMYALPGQHLEHALADAQRACSLQ 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS Y LT+E  T F++        LP ++ +  +    + +   HG   YE S  + 
Sbjct: 192 PAHLSFYHLTLEPNTPFHRTPP----ALPDDDTSAAMQEAIEDLLGRHGYEHYETSAFAQ 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +  HN NYW +GDY+GIG GAHS++         S  KHP+ +L+   + G+AV  +
Sbjct: 248 HGKQCRHNRNYWLFGDYLGIGAGAHSKLSFHDRITRESRHKHPKRYLEHASR-GNAVEHQ 306

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             ++  +   EF+M  LRL  G +   +E+  G  L+
Sbjct: 307 WQIARHELPFEFMMNALRLTGGFAPALFELRTGLPLE 343


>gi|146328678|ref|YP_001209061.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Dichelobacter nodosus VCS1703A]
 gi|146232148|gb|ABQ13126.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Dichelobacter nodosus VCS1703A]
          Length = 382

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 216/380 (56%), Gaps = 18/380 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH R     +  ++   L +        G R + S+F GG
Sbjct: 9   LSLYIHIPWCLRKCPYCDFNSHARTADDNESAYVHHLLQDFSL--DYDG-RPLHSVFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   + IAL+LD + +    + + EIT+EANP++ E   F  YR++G+NR+SLG+Q
Sbjct: 66  GTPSLFHSEQIALLLDELRQRADFTDDCEITLEANPATFEQQKFSAYRQSGINRLSLGIQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL+ + L+ LGR H+A EA  A+ LA+++ F +++ D+++ALP QT+ +   +LQ+ ++ 
Sbjct: 126 SLQPRHLQQLGRVHSADEAKQALRLAQSMNFHQINTDVMFALPAQTLDEARADLQKIIAL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S YQLTIE  T F+         LP  +  V+LY    +   A G + YE+S  +
Sbjct: 186 GAEHISWYQLTIEPNTAFFVRPPKA---LPDSDQQVELYENGSAFLRAQGFNQYEVSAWT 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNGHAVV 316
                + HN+NYW +GDY+GIG GAHS++ +   ++   S  + P ++     +N +   
Sbjct: 243 -KTTPAKHNMNYWLFGDYLGIGAGAHSKITIADGKIMRQSKYRAPAAYQARSGRNRNPYQ 301

Query: 317 EK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIE----CERNLQRQGFIER 370
           +    +   +QA E +M GLRLR G        LA R +LD+         L  +G I+ 
Sbjct: 302 DNCRRVPKTEQAFEVMMNGLRLRAGFPTA---FLAQRSDLDLSDLMPTLLPLIDRGLIDA 358

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
                +  T RG ++L++V+
Sbjct: 359 DIAECIVTTPRGFSLLNNVL 378


>gi|156932603|ref|YP_001436519.1| coproporphyrinogen III oxidase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530857|gb|ABU75683.1| hypothetical protein ESA_00385 [Cronobacter sakazakii ATCC BAA-894]
          Length = 378

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLRDLDNDAPWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+    T++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLTLAPDAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L+ A++
Sbjct: 126 QSFSEPKLARLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLREAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYAQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V +   R+  + + +HP  ++      G+ +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTLADGRILRTAKTRHPRGYM-----TGNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
            ++  + ++ +  EF M   RL E
Sbjct: 297 DKQHEVEAQDKPFEFFMNRFRLLE 320


>gi|281179964|dbj|BAI56294.1| putative oxidase [Escherichia coli SE15]
          Length = 378

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 187/324 (57%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|92115423|ref|YP_575351.1| coproporphyrinogen III oxidase, anaerobic [Chromohalobacter
           salexigens DSM 3043]
 gi|91798513|gb|ABE60652.1| coproporphyrinogen III oxidase, anaerobic [Chromohalobacter
           salexigens DSM 3043]
          Length = 390

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 129/342 (37%), Positives = 192/342 (56%), Gaps = 12/342 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+CV+KCPYCDFNSH       + +  ++++ L ++     L   R + SIF
Sbjct: 7   PLSLYVHVPWCVRKCPYCDFNSHGMDPDRALPETAYVEALLADLDADAALADGRELVSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+       +L GI      +S++EIT+EANP +VE + F  YR+AG+NR+SL
Sbjct: 67  VGGGTPSLLSGDAYRHLLQGIRARLPFASDIEITLEANPGTVEHDRFAAYREAGINRLSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +   L  LGR H+  EA  A+  AR+  F  ++ DL++ LP Q       ++ RA
Sbjct: 127 GVQSFQAPQLEVLGRIHSGEEAAQAMQDARHAGFDNINLDLMHGLPGQDEALALADIDRA 186

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ A DHLS YQLT+E  T FY         LP E+   D+     +   A G   YEIS
Sbjct: 187 LALAPDHLSWYQLTLEPNTQFYSHPP----RLPDEDTLCDIQEAGHARIEAAGYQRYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-----KHPESWLKMVR 309
            ++  G ++ HNLNYW +GDY+GIG GAH ++       +++IE     + P+++L+  +
Sbjct: 243 AYATPGRQARHNLNYWTFGDYLGIGAGAHGKLSAWQPDGSLAIERRWKVRQPQAYLRRAQ 302

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                +  +  L  ++   EFLM  LRL +G+  + W   +G
Sbjct: 303 DPRGFIAGRRALEEQELPLEFLMNALRLTQGVPRRYWHERSG 344


>gi|293610193|ref|ZP_06692494.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827425|gb|EFF85789.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 384

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/384 (36%), Positives = 217/384 (56%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +          EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKSLLKFEDGCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+   + L+ LGR H+ + A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTEHLQKLGRIHSVNNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKMAVEHGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWEFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQ-RQG 366
              H  ++K  + +E+   EF+M  LRL +G+  + +E   G +LD   E   +L+ R+ 
Sbjct: 302 AE-HLQMKK--IEAEELPFEFMMNALRLNDGVKAELYEQRTGLSLDHLNEVLTSLRARKL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E    SRL CT++G   L+SV+
Sbjct: 359 LVE--DHSRLACTEQGHIFLNSVL 380


>gi|161506344|ref|YP_001573456.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160867691|gb|ABX24314.1| hypothetical protein SARI_04541 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 378

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 187/324 (57%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT  +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTQEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTTAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFLDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  ++   +  EF M   RL E
Sbjct: 297 ESQRDVAQADKPFEFFMNRFRLLE 320


>gi|226942462|ref|YP_002797535.1| coproporphyrinogen III oxidase [Azotobacter vinelandii DJ]
 gi|226717389|gb|ACO76560.1| oxygen-independent coproporphyrinogen III oxidase [Azotobacter
           vinelandii DJ]
          Length = 373

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 209/376 (55%), Gaps = 12/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++         R + SIFFGG
Sbjct: 1   MALYVHIPWCVRKCPYCDFNSHAAGAELPEEVYVDTLLADLAADLPAAHGRELVSIFFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    +LDGI ++ + + ++EIT+EANP + E   F  YR+ G+NR+S+GVQ
Sbjct: 61  GTPSLFSARAFERLLDGIGRHLSFARDIEITLEANPGTFEQEKFADYRRLGINRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+A EAI A  +AR   F   + DL++ LP Q +     +L++A++ 
Sbjct: 121 SFQNAQLQALGRIHDAGEAIRAAGMARRAGFDNFNLDLMHGLPGQDLAGALADLRQAIAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLT+E  TLF+    +    +P +++  D+    Q++ +A G   YE S ++
Sbjct: 181 EPTHLSWYQLTLEPNTLFWSQPPE----IPEDDLLWDIQEAGQTLLAAEGFVQYETSAYA 236

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G  + HNLNYW +GD++GIG GAH+++     R+  + + + P  +L   R+      
Sbjct: 237 RNGRRARHNLNYWTFGDFLGIGAGAHAKLSDPHGRIRRTWKTRQPRDYLAPERR---FQA 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFS 374
            +  L +++   EF+M  LRL EG+    +    G  L          +  G +E     
Sbjct: 294 GERLLEADELPFEFMMNALRLTEGVPAGLFGERTGLPLAGIAAPCAAARAAGLLENDP-Q 352

Query: 375 RLRCTQRGMTMLDSVI 390
           RLR T RG   L+ ++
Sbjct: 353 RLRPTARGQLFLNDLL 368


>gi|90415269|ref|ZP_01223203.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2207]
 gi|90332592|gb|EAS47762.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2207]
          Length = 363

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 206/368 (55%), Gaps = 15/368 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH    ++ ++ +I++ + ++Q  ++    R + SIFFGGGTPSL     
Sbjct: 1   MRKCPYCDFNSHTAGSEIPEQAYIKALIADLQQDKKWAQGRKLCSIFFGGGTPSLFSAAG 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I  IL    +      ++EIT+EANP + E   F G+R AGVNR+S+G+QS  +Q L  L
Sbjct: 61  IGQILKAAERIIGFEPDIEITLEANPGTAEQEKFSGFRSAGVNRLSIGIQSFNDQHLLRL 120

Query: 149 GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H+ ++A++AI  AR   F   + DL++ L  QT+ Q   +L+ A      H+S YQL
Sbjct: 121 GRIHDGAQALSAIETARRAGFSNFNLDLMHGLSGQTVDQARRDLELASDSGALHISWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  T FY         LP E+  VD+      +    G   YE+S  +  G  S HN+
Sbjct: 181 TIEPNTEFYSRPPQ----LPEEDALVDIQQAGMELLDNGGYKQYEVSAFAQPGRRSQHNM 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK--HPESWLKMVRKNGHAVVEKEFLSSEQ 325
           NYW++GDY+GIG GAH +V + +    +   K   P+++L    ++   + +++ ++ ++
Sbjct: 237 NYWQFGDYLGIGAGAHGKVTLATENSILRTNKTRQPDNYLA---RDPLTLAQQKPIARDE 293

Query: 326 QADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
            A EF+M GLRLR+G++   +     LA  ++  +  + LQ QG +E V   R + T  G
Sbjct: 294 LAVEFMMNGLRLRDGLNAGFFTSRTGLAASSIAKQVAK-LQSQGLME-VDSRRYQTTALG 351

Query: 383 MTMLDSVI 390
              L+S +
Sbjct: 352 YQFLNSTL 359


>gi|330873955|gb|EGH08104.1| HemN family oxidoreductase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 404

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 207/377 (54%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGAKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHEDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 ARLIATPQGQLFLNDLL 399


>gi|157162416|ref|YP_001459734.1| coproporphyrinogen III oxidase [Escherichia coli HS]
 gi|170018804|ref|YP_001723758.1| coproporphyrinogen III oxidase [Escherichia coli ATCC 8739]
 gi|254038005|ref|ZP_04872063.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|300906481|ref|ZP_07124176.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 84-1]
 gi|301306564|ref|ZP_07212626.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 124-1]
 gi|301328109|ref|ZP_07221250.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 78-1]
 gi|312972803|ref|ZP_07786976.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1827-70]
 gi|157068096|gb|ABV07351.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli HS]
 gi|169753732|gb|ACA76431.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ATCC 8739]
 gi|226839629|gb|EEH71650.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|300401724|gb|EFJ85262.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 84-1]
 gi|300838182|gb|EFK65942.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 124-1]
 gi|300845413|gb|EFK73173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 78-1]
 gi|310332745|gb|EFP99958.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1827-70]
 gi|315256847|gb|EFU36815.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 85-1]
 gi|320202619|gb|EFW77189.1| coproporphyrinogen III oxidase [Escherichia coli EC4100B]
 gi|323941959|gb|EGB38138.1| radical SAM superfamily protein [Escherichia coli E482]
 gi|332344855|gb|AEE58189.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Escherichia coli UMNK88]
          Length = 378

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDV 337


>gi|127512064|ref|YP_001093261.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella loihica PV-4]
 gi|126637359|gb|ABO23002.1| coproporphyrinogen III oxidase, anaerobic [Shewanella loihica PV-4]
          Length = 379

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 196/341 (57%), Gaps = 11/341 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++   L +++        RS+ SIF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQHGELPQQEYVDDLLNDLKNDAAYVQGRSLHSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  +LDG+      + ++EIT+EANP ++E ++F  Y  AGV R+S+GVQ
Sbjct: 67  GTPSLFDASQIERLLDGVRAQIPFAPDIEITMEANPGTLEHDDFSAYCAAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H+  EA +AA   A+  +   + DL++ LP Q+  +   ++ +A + 
Sbjct: 127 SFSSDKLNLLGRIHDKHEAEVAATKAAQAGYQSFNLDLMHGLPNQSFEEAMRDIDKAAAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 187 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEALWQIYEQGQQRLAALGYEQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH ++ +    R+  +++ KHP+ +L      G  +
Sbjct: 243 KPGYQCRHNLNYWQFGDYLGIGCGAHGKITMAEDQRIYRTVKIKHPKGYLGA----GDYL 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
            +K  + +E +A E+LM  LRL   I  +++E   G + ++
Sbjct: 299 FDKSEVLAEDRALEYLMNRLRLMSPIPKREFESRTGLSAEV 339


>gi|171057394|ref|YP_001789743.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
 gi|170774839|gb|ACB32978.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
          Length = 457

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/400 (35%), Positives = 215/400 (53%), Gaps = 35/400 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH------------------VRRYKVGQEN-------FI 52
            L +Y+H P+C++KCPYCDFNSH                  + R   GQ         ++
Sbjct: 59  PLSLYIHLPWCLRKCPYCDFNSHEWAPETPAASSPRGGASGLGRPGAGQARGGIPEARYL 118

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
            +   +++    L   R I SIF GGGTPSL  P+ I  +L  +     +  + EIT+EA
Sbjct: 119 DALRADLEAALPLIWGRQILSIFIGGGTPSLFSPEGINRLLSDVRALLPLMPDCEITLEA 178

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           NP + E   F+ +R AGVNR+S+GVQS  +  LR LGR H+  +A+AA   A + F   +
Sbjct: 179 NPGTFERERFRAFRGAGVNRLSIGVQSFNDDHLRALGRVHDRGQALAAAEEAADAFDTFN 238

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DL+YALP Q++ Q   +L+ AL+    HLS+Y LTIE  TLF         V P ++ A
Sbjct: 239 LDLMYALPGQSLAQAGEDLRTALALQPPHLSVYHLTIEPNTLFAVRPP----VTPDDDAA 294

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
            ++ +    +T A GL  YE+S  +  G    HNLNYW++GDY+GIG GAHS++    HR
Sbjct: 295 SEMLDQIVDLTGATGLERYEVSAFAKPGHRCAHNLNYWQFGDYLGIGAGAHSKLSF-PHR 353

Query: 293 VAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           V   +  + P +++      G AV  +E +  +    EF++  LRLREG +++ +    G
Sbjct: 354 VLRQVRWREPAAYMTQALA-GQAVSNEEEVGRKALPFEFMLNALRLREGFALELFRERTG 412

Query: 352 RNL-DIECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             L  IE   +  +++G I R  F+++R + RG   L+ +
Sbjct: 413 LPLSSIEAALQQAEQRGLITR-DFAQMRPSARGFDFLNDL 451


>gi|118594151|ref|ZP_01551498.1| coproporphyrinogen III oxidase [Methylophilales bacterium HTCC2181]
 gi|118439929|gb|EAV46556.1| coproporphyrinogen III oxidase [Methylophilales bacterium HTCC2181]
          Length = 392

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 196/341 (57%), Gaps = 10/341 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +YVH P+C+ KCPYCDFNSH  R    K  ++ +  + L ++      +G R+I SIF
Sbjct: 15  LSIYVHIPWCIHKCPYCDFNSHELRNSSIKDQEQIYTDALLNQITLSADYSG-RTIHSIF 73

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL  P+ I  I+  I+  +T++++ E+T+EANP +++   F+GY+  GVNR+SL
Sbjct: 74  FGGGTPSLFSPEAINRIILAISHQFTLANDCEVTLEANPGTIDKAYFKGYKDIGVNRVSL 133

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS     L+ L R H+  +A  A   AR +F  ++ DL++ALP QT +    +++ AL
Sbjct: 134 GIQSFNNIHLKSLERIHDKEQAYEAAQWARQLFDNINLDLMFALPNQTKSDLIHDIKIAL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   DH+S Y LTIE  TLF+K H       P+E+ + D+ ++            YE S 
Sbjct: 194 AIRPDHISYYHLTIEPNTLFHK-HPPSQ---PNEDDSADMGDIIIETLKQQNFDHYETSA 249

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNGHA 314
            +       HN+NYW +GDY+G+G GAHS++ +  ++    S  K+P  +++ V+KN   
Sbjct: 250 FAKELKHCRHNMNYWEFGDYLGLGAGAHSKITLTDNQQKRFSCYKNPAQYIENVKKNT-P 308

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            +E++ L   +   EF+M  LRL  G     +    G +LD
Sbjct: 309 FIEEKLLVKNELIFEFMMNALRLNHGFKKNLFISSTGVSLD 349


>gi|308272747|emb|CBX29351.1| hypothetical protein N47_J03320 [uncultured Desulfobacterium sp.]
          Length = 400

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 208/380 (54%), Gaps = 14/380 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N  G+Y+H PFC+ KCPYCDF S +  + + ++ F+++ L EM   + +  P    +I+ 
Sbjct: 23  NPAGLYIHIPFCISKCPYCDFYS-ITDHSL-KKKFVKALLLEMSLYKSV--PLIYDTIYI 78

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++ ++I  I++ +   + ++ + EITIE NP +V   + + +++ G+NRI++G
Sbjct: 79  GGGTPSALKSKDIGQIIETVFNLYKITPDPEITIEVNPKTVTPGSLKEFKQTGINRINIG 138

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  ++ LRFLGR H+A EA  AI  A+N  F  +  DLIY +P QT   W  +L+ A+
Sbjct: 139 VQSFSDEYLRFLGRIHSAMEAKEAIAWAKNAGFENLGIDLIYGIPGQTEKSWLFDLKTAI 198

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               DH+S Y LT E  T  Y   K G      + +A  L+ LT       G   YEISN
Sbjct: 199 QIEPDHISCYTLTYEPKTPIYNHMKSGAFSPMPDFLAGSLFELTSDFLENCGYIHYEISN 258

Query: 256 HSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            S     +S HNL YW    YIG GP AHS           S+      ++K +      
Sbjct: 259 FSKGTSKKSRHNLKYWSDAPYIGFGPSAHSFDGTSRSWNVRSV----ADYIKTIESGLFP 314

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERV 371
           V EKE LS EQQ  E +++GLR +EGI++ ++ +  G     +  E   +L+ +  I  +
Sbjct: 315 VEEKEVLSKEQQIIEAILLGLRKKEGITISNFNIKFGLIFEEVFKETISDLKEKKLI-AL 373

Query: 372 QFSRLRCTQRGMTMLDSVIA 391
             ++ R T++G  +LDS+ A
Sbjct: 374 DNNQCRLTKKGTLLLDSICA 393


>gi|237807734|ref|YP_002892174.1| oxygen-independent coproporphyrinogen III oxidase [Tolumonas
           auensis DSM 9187]
 gi|237499995|gb|ACQ92588.1| oxygen-independent coproporphyrinogen III oxidase [Tolumonas
           auensis DSM 9187]
          Length = 381

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/389 (36%), Positives = 213/389 (54%), Gaps = 29/389 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V + +++ + L ++         R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKQEVPETDYVAALLADLDADLAYVQGRQLQSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I ++L G+A     + ++EIT+EANP +VE   F GY++AGV RIS+GV
Sbjct: 66  GGTPSLFSAAAIKVLLQGVATRIPFADDIEITLEANPGTVEAGRFAGYQQAGVTRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L+ LGR H+  +A+AA   AR    R  + DL++ LP+QT++    +LQ+A+ 
Sbjct: 126 QSFQPEKLQRLGRIHDPKQAVAAGLQARQAGLRSFNIDLMHGLPEQTISDALFDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F         VLP +    D+      +  A G   YEIS +
Sbjct: 186 IAPPHLSWYQLTIEPNTAFGSRPP----VLPEDETLWDIQEQGHQLLLAAGYRQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G E  HNLNYW++GDY+GIG GAH ++ + +    I     KHP+ +L         
Sbjct: 242 AKPGYECRHNLNYWQFGDYLGIGCGAHGKITLPAEDRIIRTAKVKHPKGYLD-------- 293

Query: 315 VVEKEFLS------SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---- 364
             E+ FL       ++ +  E+ M  +RL + I     E +A  +L  E    L +    
Sbjct: 294 -PERTFLDQCWNVENDDRPFEYFMNRMRLFQPIPKN--EFIARTSLSAESVEPLFKRAYE 350

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           QG +E+ + S  + T+ G   L+S++  L
Sbjct: 351 QGLLEQTE-SEWQVTETGHRYLNSLLTML 378


>gi|237748599|ref|ZP_04579079.1| coproporphyrinogen oxidase [Oxalobacter formigenes OXCC13]
 gi|229379961|gb|EEO30052.1| coproporphyrinogen oxidase [Oxalobacter formigenes OXCC13]
          Length = 401

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/372 (35%), Positives = 206/372 (55%), Gaps = 23/372 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CV+KCPYCDF SH +   + +  ++    ++++    L   R +SSIF GG
Sbjct: 28  LSLYIHFPWCVRKCPYCDFYSHEKGSNLPEAEYLDVLRSDLEASLPLVWGRPVSSIFIGG 87

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    I  +L  I     V  + EI++EANP + E   F+ YR++G+NR+S+G+Q
Sbjct: 88  GTPSLMSADGIDRLLSSIRALLPVLPDAEISMEANPGTFESGKFKSYRESGINRLSIGIQ 147

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR H++ EA  AI +A   F  ++ DL+ ALP+QT+ + E ++  ALS+ 
Sbjct: 148 SFNARHLHQLGRIHDSDEAKDAIAIAMKYFDNVNLDLMIALPEQTLEELEQDISTALSFQ 207

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLYQLTIE  T F K       VLP+E+V   + N  + +T+  G   YE+S ++ 
Sbjct: 208 TQHLSLYQLTIEPNTYFAKRPP----VLPNEDVIERMQNRVEEMTALAGFEHYEVSAYAK 263

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +  HN NYW +GDY+GIG  AHS++ V    +     ++P+  L M      + VE+
Sbjct: 264 PGHQCWHNKNYWLFGDYLGIGAAAHSKLTVNDEIIRQMRHRNPK--LYMEGDEIKSRVEE 321

Query: 319 EF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-ERVQFSRL 376
           +F + S     EF++  LR   G               + CER      FI E ++ +R 
Sbjct: 322 QFTVQSSDVGFEFMLNALRFTGGFPAS-----------LFCERTGLPLSFILEPLEKAR- 369

Query: 377 RCTQRGMTMLDS 388
              ++G+  +DS
Sbjct: 370 ---KKGLLTMDS 378


>gi|28872166|ref|NP_794785.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28855420|gb|AAO58480.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 404

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 207/377 (54%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTSEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHE-DP 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 ARLIATPQGQLFLNDLL 399


>gi|256019243|ref|ZP_05433108.1| coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|332280351|ref|ZP_08392764.1| coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|332102703|gb|EGJ06049.1| coproporphyrinogen III oxidase [Shigella sp. D9]
          Length = 378

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 190/341 (55%), Gaps = 11/341 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +  + +  +  EF M   RL E     ++    G   D+
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDV 337


>gi|221633414|ref|YP_002522639.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermomicrobium roseum DSM 5159]
 gi|221156673|gb|ACM05800.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermomicrobium roseum DSM 5159]
          Length = 404

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/380 (37%), Positives = 199/380 (52%), Gaps = 20/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSIF 75
           G+YVH PFC + CPYCDFN + R     QE  I  +L     E+  +    G   + +I+
Sbjct: 23  GLYVHIPFCRRVCPYCDFNVYAR-----QEPLIPRYLAAVRRELALLADRWGRGPVRTIY 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +A +LD IA  + +    E+T+EANP +V+     GYR AGVNR+SL
Sbjct: 78  LGGGTPSLLTPHQVAELLDAIAAIFVLVDQPEVTLEANPETVDTEKLAGYRAAGVNRLSL 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+L  Q L+ LGR H     +AA   AR   F  ++ DLIY  P QT  QWE +L   
Sbjct: 138 GVQTLVPQGLKVLGRAHRPETPVAAYRAARATGFRNVNLDLIYGWPGQTRDQWEQDLATV 197

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS+  +HLSLY LTIE GT + +  + G L    ++V  +L  L       HG   YE+S
Sbjct: 198 LSWQPEHLSLYALTIEPGTPYERAVRRGILRPLDDDVVAELAELAMEQLEKHGYLHYELS 257

Query: 255 NHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N +  G + S+HN  YWR G Y+G+G GAH    +G  R     E+ P  ++  V     
Sbjct: 258 NWARAGCSRSIHNTIYWRNGFYLGVGAGAHG--YLGGIRTV--NERLPARYIARVEAGDL 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECERNLQ---RQGFIE 369
            + + E +    +  E +M+GLRL  +GIS        G  L       L    + G IE
Sbjct: 314 PIADMESIDPRTELVETMMLGLRLVADGISAAAVRARHGVELSEAYGPELDELVQYGLIE 373

Query: 370 RVQFSRLRCTQRGMTMLDSV 389
                RLR ++RG+ + + V
Sbjct: 374 -WDGERLRLSRRGILLANEV 392


>gi|213971467|ref|ZP_03399579.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
 gi|301383506|ref|ZP_07231924.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061939|ref|ZP_07253480.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           K40]
 gi|302134686|ref|ZP_07260676.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213923749|gb|EEB57332.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
          Length = 404

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 207/377 (54%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYLN---PDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD      R  +++G +   Q 
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAGARRQAEQKGLLHEDQ- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 ARLIATPQGQLFLNDLL 399


>gi|238795057|ref|ZP_04638650.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia intermedia ATCC 29909]
 gi|238725605|gb|EEQ17166.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia intermedia ATCC 29909]
          Length = 360

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 207/367 (56%), Gaps = 16/367 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  +  V  + +++  L ++     LT  R IS+IF GGGTPSL+    
Sbjct: 1   MQKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVPLTSGREISTIFIGGGTPSLLSAAA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +LDG+     ++++ EIT+EANP +VE + F GY++AG+NRIS+GVQS   Q L  L
Sbjct: 61  MQQLLDGVRARLPLAADAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAQKLTRL 120

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++    HLS YQL
Sbjct: 121 GRIHGPDEAKRAAELATSLNLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  T F         VLP ++   D++     + +A G   YE S ++ LG +  HNL
Sbjct: 181 TIEPNTGFSSRPP----VLPDDDALWDIFQQGHQLLTAAGYQQYETSAYAKLGYQCQHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           NYWR+GDY+GIG GAH +V     R+  +I+ KHP  +++     G  + ++  + +  +
Sbjct: 237 NYWRFGDYLGIGCGAHGKVTFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVETADR 291

Query: 327 ADEFLMMGLRLREGISVKD---WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
             EF M   RL E     D   +  LA   +  + +  L +   IE  ++ ++  T++G 
Sbjct: 292 PFEFFMNRFRLLEAAPRADFYHFTGLAESTIRPQLDEALAKGYLIETEEYWQI--TEKGK 349

Query: 384 TMLDSVI 390
             L+S++
Sbjct: 350 LFLNSLL 356


>gi|323188651|gb|EFZ73936.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli RN587/1]
          Length = 378

 Score =  232 bits (591), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 192/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA ++  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASSLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|194436912|ref|ZP_03069012.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 101-1]
 gi|256024536|ref|ZP_05438401.1| coproporphyrinogen III oxidase [Escherichia sp. 4_1_40B]
 gi|194424394|gb|EDX40381.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 101-1]
 gi|323960752|gb|EGB56373.1| radical SAM superfamily protein [Escherichia coli H489]
          Length = 378

 Score =  232 bits (591), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|303252845|ref|ZP_07339004.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648275|gb|EFL78472.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 385

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/349 (36%), Positives = 193/349 (55%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT      G R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQLAIGNRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  V   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKGYQCCHNLNYWRFGDYLAIGCGAHGKISYPTGEVYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|218691079|ref|YP_002399291.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|331659090|ref|ZP_08360032.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
 gi|218428643|emb|CAR09427.1| putative oxidoreductase [Escherichia coli ED1a]
 gi|315295644|gb|EFU54967.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 16-3]
 gi|331053672|gb|EGI25701.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
          Length = 378

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  + +  +  EF M   RL E     ++    G
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTG 332


>gi|50083685|ref|YP_045195.1| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter sp. ADP1]
 gi|49529661|emb|CAG67373.1| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter sp. ADP1]
          Length = 385

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 206/378 (54%), Gaps = 14/378 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH           ++ ++Q+ + + +   +    R I S+
Sbjct: 12  LSLYIHMPWCVRKCPYCDFNSHAVPNGALSLELEQQYLQALVADFETQVKFVQGRKIHSV 71

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI  Q    + + I        + EIT+EANP +VE + F  Y +AG+NR+S
Sbjct: 72  FIGGGTPSLISAQGYQWLFEKIRALVDFEQDCEITLEANPGTVEHDPFADYLEAGINRLS 131

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L  LGR H++  AI AI LA+   F R++ DL++ L +QT+ Q  ++L+ 
Sbjct: 132 LGVQSFDQDHLERLGRIHSSENAIEAIKLAKQAGFERVNADLMHGLSQQTLEQALLDLKL 191

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+     H+S YQLTIE  T+F++       VLP + +   +    +    A G   YE+
Sbjct: 192 AVDNGATHISWYQLTIEPNTVFFRTQP----VLPQDEILEQIQRQGEQYLKAQGFSNYEV 247

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V     
Sbjct: 248 SAWR-KEKPSAHNLNYWQFGDYLAIGAGAHGKVTQPDGVYRFQKTRLPKDYLAKVPAEH- 305

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQ 372
             V+ + + +++   EF+M  LRL EG++   +E   G +L DIE   N  RQ  +    
Sbjct: 306 --VQWKRIEADELPFEFMMNALRLNEGVATNLYEQRTGLSLVDIEPALNALRQKKLLVND 363

Query: 373 FSRLRCTQRGMTMLDSVI 390
             R+ CT++G   L+SV+
Sbjct: 364 PERIACTEQGHLFLNSVL 381


>gi|306812141|ref|ZP_07446339.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|305854179|gb|EFM54617.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
          Length = 378

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 188/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIK 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
             +  + +  +  EF M   RL E
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLE 320


>gi|113969531|ref|YP_733324.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-4]
 gi|113884215|gb|ABI38267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-4]
          Length = 385

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/340 (37%), Positives = 195/340 (57%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF GG
Sbjct: 14  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQKAYVDALLADLRQDLHLVQGRKLHTIFIGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S ++EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 74  GTPSLFDANQIKRILDGANALIPFSDDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA  A   A    +   + DL++ LP Q+  +   ++  A + 
Sbjct: 134 SFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 194 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEDLWQIYEQGQQKLAALGYEQYEISAYA 249

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L   + N    
Sbjct: 250 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLAADKYN---- 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E+  ++ E +A E+LM  LRL   I  +++E   G + D
Sbjct: 306 FEQTEVAEEDRALEYLMNRLRLMTPIPKQEFENRTGLHRD 345


>gi|325124369|gb|ADY83892.1| putative oxidase [Acinetobacter calcoaceticus PHEA-2]
          Length = 384

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/384 (35%), Positives = 217/384 (56%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +          EIT+EANP ++E + F GY  AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKSLLKFEDGCEITLEANPGTLEHDPFAGYLDAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+   + L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTEHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLGQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+ +   H+S YQLTIE  T+F++       +LP + V  D+    ++   A+G  
Sbjct: 187 DLKVAVEHGATHISWYQLTIEPNTVFFRTQP----ILPQDEVLEDIQEQGEAYLKANGFV 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWEFGDYLAIGAGAHGKVTQPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ-RQG 366
              H  ++K  + +E+   EF+M  LRL +G+  + +E   G +LD   E   +L+ R+ 
Sbjct: 302 AE-HLQMKK--IEAEEIPFEFMMNALRLNDGVKAELYEQRTGLSLDHLNEVLTSLRARKL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E    +RL CT++G   L+SV+
Sbjct: 359 LVE--DDARLACTEQGHIFLNSVL 380


>gi|260599284|ref|YP_003211855.1| hemN family oxidoreductase [Cronobacter turicensis z3032]
 gi|260218461|emb|CBA33599.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein yggW
           [Cronobacter turicensis z3032]
          Length = 378

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 189/324 (58%), Gaps = 11/324 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDNDAPWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++S+ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLALASDAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLARLGRVHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++ +    +  + + +HP  ++      G+ +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITLADGCILRTAKTRHPRGYM-----TGNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLRE 339
            ++  + ++ +  EF M   RL E
Sbjct: 297 DKQHEVETQDKPFEFFMNRFRLLE 320


>gi|209920414|ref|YP_002294498.1| coproporphyrinogen III oxidase [Escherichia coli SE11]
 gi|300815575|ref|ZP_07095799.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 107-1]
 gi|209913673|dbj|BAG78747.1| putative oxidase [Escherichia coli SE11]
 gi|300531504|gb|EFK52566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 107-1]
 gi|324017228|gb|EGB86447.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 117-3]
          Length = 378

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 186/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|238798800|ref|ZP_04642270.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia mollaretii ATCC 43969]
 gi|238717371|gb|EEQ09217.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia mollaretii ATCC 43969]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 206/367 (56%), Gaps = 16/367 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + 
Sbjct: 1   MQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDAPLVSGREISTIFIGGGTPSLLSAEA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +LDG+     V+ + EIT+EANP +VE + F GY++AG+NRIS+GVQS   Q L  L
Sbjct: 61  MQQLLDGVRARLPVAVDAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAQKLTRL 120

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++    HLS YQL
Sbjct: 121 GRIHGPDEAKRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  T F         VLP ++   D++     + SA G   YE S ++  G +  HNL
Sbjct: 181 TIEPNTSFSSRPP----VLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           NYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  + +  +
Sbjct: 237 NYWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVEAADR 291

Query: 327 ADEFLMMGLRLREGISVKD---WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
             EF M   RL E     D   +  LA   +  + +  L ++  IE  ++ ++  T++G 
Sbjct: 292 PFEFFMNRFRLLEAAPRADFYHFTGLAESTIRPQLDEALAKEYLIETEEYWQI--TEKGK 349

Query: 384 TMLDSVI 390
             L+S++
Sbjct: 350 LFLNSLL 356


>gi|165976267|ref|YP_001651860.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876368|gb|ABY69416.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 385

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 193/349 (55%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT      G R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQLAIGNRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|271501909|ref|YP_003334935.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
 gi|270345464|gb|ACZ78229.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
          Length = 379

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 209/377 (55%), Gaps = 14/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     +   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLPMAVARPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+    ++  + EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLSLVPDAEITMEANPGTVEADRFSGYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A++
Sbjct: 126 QSFSPDKLTRLGRIHGPEEAKRAAVLAAGLGLRSFNLDLMHGLPEQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         +LP ++   D++     + S  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----MLPDDDALWDIFEQGHRLLSNAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYQCRHNLNYWRFGDYLGIGCGAHGKITFTDGEIVRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
            ++  ++   +  EF M   RL E     D+    G +  +  E+      QG++   + 
Sbjct: 297 QQRSEVALADRPFEFFMNRFRLLEPAPRADFTAYTGLSESVIREQLDAALTQGYLTETE- 355

Query: 374 SRLRCTQRGMTMLDSVI 390
              + T+ G   L+S++
Sbjct: 356 QHWQVTEHGKLFLNSLL 372


>gi|294649161|ref|ZP_06726602.1| coproporphyrinogen dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824959|gb|EFF83721.1| coproporphyrinogen dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 384

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 208/378 (55%), Gaps = 14/378 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH           ++ ++ + + + +   ++   RSI S+
Sbjct: 11  LSLYIHMPWCVRKCPYCDFNSHAVPDGHLSMDLEQQYLAALVADFETQIEMAQGRSIHSV 70

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI  Q    + + +       ++ EIT+EANP +VE + F  Y   G+NR+S
Sbjct: 71  FIGGGTPSLISAQGYQWLFEQLKARLGFEADCEITLEANPGTVEHDPFADYLAVGINRLS 130

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS + + L+ LGR H AS A+ AIH AR   F R++ DL++ LP+QT  Q   +LQ 
Sbjct: 131 LGVQSFDTEHLQRLGRIHTASNALDAIHQARQAGFERVNVDLMHGLPQQTEQQALADLQL 190

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+ +   H+S YQLTIE  T+F++       VLP + V   +    ++   A+G   YE+
Sbjct: 191 AVEHGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEHIQAEGEAYLKANGYVNYEV 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V     
Sbjct: 247 SAWR-KEKPSAHNLNYWQFGDYLAIGAGAHGKVTHPEGVYRFQKTRLPKDYLAKVPAEH- 304

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQ 372
             V+ + + +++ A EF+M  LRL +G+    +E   G +L ++    N  R+  +    
Sbjct: 305 --VQMKRIEADELAFEFMMNALRLNDGVEATLYEQRTGLSLAELTPILNTLREKKLLVAA 362

Query: 373 FSRLRCTQRGMTMLDSVI 390
             R+ CT++G   L++V+
Sbjct: 363 ADRIACTEQGHIFLNTVL 380


>gi|190150173|ref|YP_001968698.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|307245710|ref|ZP_07527796.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307261332|ref|ZP_07543007.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307263512|ref|ZP_07545127.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|189915304|gb|ACE61556.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306853412|gb|EFM85631.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306869063|gb|EFN00865.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871155|gb|EFN02884.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 385

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 193/349 (55%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT      G R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQLAIGNRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|259909618|ref|YP_002649974.1| coproporphyrinogen III oxidase [Erwinia pyrifoliae Ep1/96]
 gi|224965240|emb|CAX56772.1| coproporphyrinogen III oxidase [Erwinia pyrifoliae Ep1/96]
 gi|283479696|emb|CAY75612.1| putative oxidase [Erwinia pyrifoliae DSM 12163]
          Length = 378

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/336 (37%), Positives = 194/336 (57%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  E ++Q  L ++     LT  R +S++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHEEYVQHLLNDLDIDLPLTSGRDVSTVFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+    T++ N EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLTLAHNAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFNPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPPR----LPDEDDLWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++ +     +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGTIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  ++  ++  EF M   RL E     ++    G
Sbjct: 297 DKRVEVADAEKPFEFFMNRFRLLEAAPRAEFTRYTG 332


>gi|126208323|ref|YP_001053548.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           L20]
 gi|126097115|gb|ABN73943.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 385

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 193/349 (55%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT      G R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQLAIGNRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|169797350|ref|YP_001715143.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii AYE]
 gi|213155835|ref|YP_002317880.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB0057]
 gi|215484790|ref|YP_002327025.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB307-0294]
 gi|301512878|ref|ZP_07238115.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB058]
 gi|301596056|ref|ZP_07241064.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB059]
 gi|169150277|emb|CAM88174.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii AYE]
 gi|213054995|gb|ACJ39897.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB0057]
 gi|213986328|gb|ACJ56627.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB307-0294]
          Length = 384

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/382 (35%), Positives = 213/382 (55%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   +L   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVELAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+     H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKTAVEQGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFI 368
              H  ++K  + +++   EF+M  LRL +G+  + +E+  G +L D+       R   +
Sbjct: 302 AE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELYELRTGLSLNDLNDVLTSLRSRKL 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
                 RL CT++G   L+SV+
Sbjct: 359 LVEDSGRLACTEQGHIFLNSVL 380


>gi|193063528|ref|ZP_03044617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E22]
 gi|193067238|ref|ZP_03048206.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E110019]
 gi|194426329|ref|ZP_03058884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B171]
 gi|260845625|ref|YP_003223403.1| putative oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|307310424|ref|ZP_07590072.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|192930805|gb|EDV83410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E22]
 gi|192959195|gb|EDV89630.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E110019]
 gi|194415637|gb|EDX31904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B171]
 gi|195183148|dbj|BAG66693.1| putative oxidase [Escherichia coli O111:H-]
 gi|257760772|dbj|BAI32269.1| predicted oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|306909319|gb|EFN39814.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|315062261|gb|ADT76588.1| predicted oxidoreductase [Escherichia coli W]
 gi|323162599|gb|EFZ48446.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli E128010]
 gi|323173831|gb|EFZ59460.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli LT-68]
 gi|323183526|gb|EFZ68923.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1357]
 gi|323377155|gb|ADX49423.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           KO11]
 gi|324119750|gb|EGC13630.1| radical SAM superfamily protein [Escherichia coli E1167]
          Length = 378

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 185/325 (56%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|157155940|ref|YP_001464308.1| coproporphyrinogen III oxidase [Escherichia coli E24377A]
 gi|157077970|gb|ABV17678.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E24377A]
          Length = 378

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 185/325 (56%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVETDRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKHAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|330831107|ref|YP_004394059.1| Coproporphyrinogen III oxidase [Aeromonas veronii B565]
 gi|328806243|gb|AEB51442.1| Coproporphyrinogen III oxidase, anaerobic [Aeromonas veronii B565]
          Length = 381

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 196/341 (57%), Gaps = 10/341 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++    ++ + L ++    +    R +SSIF G
Sbjct: 6   PLSLYIHVPWCVQKCPYCDFNSHAQKGELPHLEYVAALLEDLDQDLKWAQGRPLSSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     +++  EIT+EANP +VE   F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLTVEAMQTLLDGVRARIPLAAECEITMEANPGTVEAEKFAGFQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H   EA  A  LA  I  P  + DL++ LP Q++     +LQ+A+ 
Sbjct: 126 QSFQQEKLTRLGRIHGPEEARKAAALAHAIKLPTFNLDLMHGLPDQSLDDALYDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F          LP ++   D+Y    ++ +A G   YEIS +
Sbjct: 186 CAPPHLSWYQLTIEPNTAFASKPPK----LPEDDTLWDIYEQGHAMLTASGYRQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH +V   +++  +     KHP+ +L   R     
Sbjct: 242 AKEGYQCHHNLNYWRFGDYLGIGCGAHGKVTDLANQQILRTAKVKHPKGYLDKSRPY--- 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           + E+  ++++    E+ M   RL E     ++E   G  L+
Sbjct: 299 LDEQWQVTADDLPLEYFMNRFRLFEPAPKAEFEAYTGLPLE 339


>gi|260857088|ref|YP_003230979.1| putative oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|260869642|ref|YP_003236044.1| putative oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|257755737|dbj|BAI27239.1| predicted oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|257765998|dbj|BAI37493.1| predicted oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|323154664|gb|EFZ40863.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli EPECa14]
          Length = 378

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 185/325 (56%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKSSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|261337371|ref|ZP_05965255.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium gallicum DSM 20093]
 gi|270277751|gb|EFA23605.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium gallicum DSM 20093]
          Length = 388

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 200/387 (51%), Gaps = 21/387 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLT-------GPRS 70
           VYVH PFC+++C YCDFN++  R       +E +    + EM+ +RQ         GP  
Sbjct: 4   VYVHVPFCLRRCGYCDFNTYTARDLGNGASREGYAHQAIQEMRLVRQWQLDHGLDEGP-- 61

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S++F GGGTP+++ P N+A ++  I   W + +  EIT EANP +V+ +  Q    AG 
Sbjct: 62  VSTVFLGGGTPTILTPSNLAAMVQAIDGIWGIEAGAEITTEANPDTVDADYIQALADAGF 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            RIS G+QS     L  L R H  +   A I+ A     R S DLIY  P +++  W   
Sbjct: 122 TRISFGMQSAVPHVLHTLDRTHTPANVEAGINAANRAGLRSSVDLIYGTPGESLDDWRTS 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ A++  V+H+S Y LT+E  T   +    G L  P ++     Y++  ++ +  G   
Sbjct: 182 VKTAIALGVNHISAYALTVEPTTTMGRRIAAGVLPKPDDDDEAAKYDIADTLLTQAGFDW 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMV 308
           YE+SN +  G ES HNL YWR  D+ GIGPGAHS      GS   A  I  HP+ W + +
Sbjct: 242 YEVSNWAKPGYESRHNLGYWRNVDWAGIGPGAHSHYGDVQGSAVRAWDI-THPKVWAQAI 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            +        E +S+ +QA+E LM+GLR+REG+ +      A   +     R    +G +
Sbjct: 301 NEGRVPFAGSETISATEQAEEQLMLGLRIREGLDIAQ----ADARIPQAAWRQFADEGLL 356

Query: 369 ERVQFSRLRC--TQRGMTMLDSVIANL 393
           +    +  R   T+RG  + D++I  L
Sbjct: 357 DPRALNEGRAVPTRRGRLLNDAMIMQL 383


>gi|114564030|ref|YP_751544.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella frigidimarina NCIMB 400]
 gi|114335323|gb|ABI72705.1| coproporphyrinogen III oxidase, anaerobic [Shewanella frigidimarina
           NCIMB 400]
          Length = 379

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 198/355 (55%), Gaps = 14/355 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++        R + +IF GG
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHGQNGELPQQQYVDALLDDLKQDLAYVQGRKVHTIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  IL+G         N+EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 68  GTPSLFDASQIQRILEGAQALIPFEDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L  LGR HN  EA  A   A+   +   + DL++ LP Q+  +   ++  A + 
Sbjct: 128 SFSKEKLNLLGRIHNEDEAKVAAEKAKQADYLSFNLDLMHGLPNQSFDEAMHDIDTATAL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 188 APPHLSWYQLTIEPNTLFHSKPPQ----LPDDENLWQIYEQGQQRLAALGYEQYEISAYA 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH ++ +  S+R+  +++ KHP+ +L   +      
Sbjct: 244 KPGYQCRHNLNYWQFGDYLGIGCGAHGKITLPDSNRIVRTVKIKHPKGYLAADK----YT 299

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            E   +  E +  E+LM  LRL   I   ++E   G++ ++     L  Q  IER
Sbjct: 300 FETTDVVEEDRPLEYLMNRLRLMTPIPKTEFEQRTGQSAEV---VKLGMQKSIER 351


>gi|312622227|ref|YP_004023840.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202694|gb|ADQ46021.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 377

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 136/380 (35%), Positives = 216/380 (56%), Gaps = 18/380 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISS 73
           ++G+Y+H PFC +KC YCDF S+     V  ++ I ++ +    E+ + ++      I +
Sbjct: 3   NIGLYIHIPFCKRKCYYCDFVSYEN---VDDDDVIFAYFSALENELIYYKE-NYDIEIDT 58

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS I    I  +L+ I  N+ + SN EITIEANP S+     Q Y  AGVNR+
Sbjct: 59  IYLGGGTPSSISANYILKLLEFICSNFKIKSNCEITIEANPESITHEKLQSYSLAGVNRL 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QSL +  LR +GR H++  A+  +      F   S D+I  LP QT   +   L  
Sbjct: 119 SIGIQSLNDVELRAIGRVHDSEVALKILSRVPLYFENFSVDVITGLPYQTFKSFMQTLNT 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L ++  H+S+Y L IE+GT  ++ +++   +LPSE+    ++   + I S  G++ YEI
Sbjct: 179 LLEFSPPHVSIYSLKIEEGTFLFERYEEYKSLLPSEDEERRMFWWAKRILSEIGIYHYEI 238

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HNL YW   +YIG+G  AHS  +   +    +I ++     K +++NG 
Sbjct: 239 SNFAKKGFECKHNLKYWNVEEYIGVGCAAHSFFEGYRYYNTSNINEYA----KKIKENGL 294

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIE 369
           AV  KEF+S+E+   EF+++GLR  EG S+ ++    G    R  + + E+ L++ G IE
Sbjct: 295 AVEGKEFISNEESEKEFIILGLRKIEGFSLDEFRERFGVEFERKYNSQIEK-LKKYGLIE 353

Query: 370 RVQFSRLRCTQRGMTMLDSV 389
            V  SRL+ T+RG+ + + V
Sbjct: 354 -VNNSRLKLTERGIDLANLV 372


>gi|254491774|ref|ZP_05104953.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Methylophaga thiooxidans DMS010]
 gi|224463252|gb|EEF79522.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Methylophaga thiooxydans DMS010]
          Length = 390

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 216/379 (56%), Gaps = 15/379 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L +++    L   R++ +IF GG
Sbjct: 14  LSLYIHVPWCVRKCPYCDFNSHHSPQEIPEKAYVDALLRDLEQEVPLIWGRTVQTIFIGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    +  G+     +  + EIT+EANP ++E   F+ YR  G+NR+S+G+Q
Sbjct: 74  GTPSLFSAEAYDRLFSGLRALLPLHHDAEITLEANPGTLEAGRFKEYRALGINRLSIGIQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +++L  LGR HN+ +AI A+  A    +   + DL++ LP Q   +   +++ A++ 
Sbjct: 134 SFNDEALTKLGRIHNSKQAIKAVEAAHAADYDNFNLDLMFGLPGQDENKAAADVETAIAL 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  TLFY         LP ++   D     Q+  +  G   YE S ++
Sbjct: 194 QPAHISYYQLTIEPNTLFYAQPP----TLPDDDPIYDWQLQNQTRLAKAGYMQYETSAYA 249

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISI-EKHPESWLKMVRKNGHAV 315
             G +  HN+NYW++GDYIGIG GAH ++      ++A  + +K P++++    K+  ++
Sbjct: 250 QQGRQCRHNVNYWQFGDYIGIGAGAHGKISSAAPQQIARRVKQKQPQAFIDTAGKDT-SL 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN-LQRQ---GFIERV 371
           +E+  ++ ++   EF++  +RL +G++   ++   G  + I   R  +QR    G +E  
Sbjct: 309 LEQSLVAEDEVGFEFMLNAMRLLDGVATPLFQQHTG--VPISTIRGAMQRAEALGLVEH- 365

Query: 372 QFSRLRCTQRGMTMLDSVI 390
             SR+R T++G   L+S+I
Sbjct: 366 SISRIRPTEKGQRYLNSLI 384


>gi|114046764|ref|YP_737314.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-7]
 gi|113888206|gb|ABI42257.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-7]
          Length = 385

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 195/340 (57%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF GG
Sbjct: 14  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQQAYVDALLADLRQDLHLVQGRKLHTIFIGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S ++EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 74  GTPSLFDANQIKRILDGANALIPFSDDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA  A   A    +   + DL++ LP Q+  +   ++  A + 
Sbjct: 134 SFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 194 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEDLWQIYEQGQQKLAALGYEQYEISAYA 249

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L     N H  
Sbjct: 250 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYL--AADNYH-- 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E+  ++ E +A E+LM  LRL   I  +++E   G + D
Sbjct: 306 FEQTEVAEEDRALEYLMNRLRLMTPIPKQEFEDRTGLHRD 345


>gi|262374093|ref|ZP_06067370.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262311104|gb|EEY92191.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 384

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 212/380 (55%), Gaps = 18/380 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH      GQ      + ++ + + + +   ++   R I 
Sbjct: 11  LSLYIHMPWCVRKCPYCDFNSHA--VPDGQLSMDLEQQYLTALVADFETQVEMAQGRLIH 68

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSLI  Q    + D +    + S + EIT+EANP +VE ++F  Y   G+NR
Sbjct: 69  SVFIGGGTPSLISAQGYQWLFDQLKARLSFSDDCEITLEANPGTVEHDSFADYLSVGINR 128

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS + + L+ LGR H+A  A+ AI  AR   F R++ DL++ LP QT+ Q   +L
Sbjct: 129 LSIGVQSFDTEHLQRLGRIHSAHNAMDAIQQARQAGFERVNVDLMHGLPSQTVEQALTDL 188

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+ +   H+S YQLTIE  T+F++        LP + +   +  L ++   A+G   Y
Sbjct: 189 KLAVEHGATHISWYQLTIEPNTVFFRTQP----ALPQDEILEQIQELGEAYLIANGFINY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V   
Sbjct: 245 EVSAWR-KAKPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAE 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIER 370
               ++ + + +++   EF+M  LRL EG++ + ++   G +L+ ++   +  RQ  +  
Sbjct: 304 H---LQMKRIEADELPFEFMMNALRLNEGVAAELYQQRTGLDLNHLQMPLSKLRQKKLLL 360

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
              S++ CT++G   L+SV+
Sbjct: 361 DDTSKIACTEQGHIFLNSVL 380


>gi|24374870|ref|NP_718913.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella oneidensis MR-1]
 gi|24349568|gb|AAN56357.1|AE015773_2 oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella oneidensis MR-1]
          Length = 385

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 193/342 (56%), Gaps = 11/342 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF G
Sbjct: 13  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQAYVDALLADLRQDLHLVQGRKLHTIFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILD        S  +EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 73  GGTPSLFDANQIKRILDDANALIPFSDGIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   AR   +   + DL++ LP Q+  +   ++  A S
Sbjct: 133 QSFSKDKLNLLGRIHDQNEAQTAAQKARQADYLSFNLDLMHGLPNQSFEEAMADIDTAAS 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 193 LNPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEDLWQIYEQGQQKLAALGYEQYEISAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L       + 
Sbjct: 249 AKPGYQCQHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLTA----DNY 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             E+  ++ E +A E+LM  LRL   I  +++E   G   D+
Sbjct: 305 TFEQTEVAQEDRALEYLMNRLRLMTPIPKQEFEDRTGLPRDV 346


>gi|167854727|ref|ZP_02477506.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus parasuis 29755]
 gi|167854141|gb|EDS25376.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus parasuis 29755]
          Length = 387

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 188/342 (54%), Gaps = 18/342 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L +++      +     R I SI
Sbjct: 9   LSLYIHIPWCVQKCPYCDFNSHAQKGIIPEQEYIQHLLNDLEQDLISYKTAIADRKIHSI 68

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + I  +L  I K    S   EIT+EANP + E   F GY + GVNRIS
Sbjct: 69  FIGGGTPSLFSAEGIHYLLAEIRKRIDFSHECEITLEANPGTAEAERFIGYVQGGVNRIS 128

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +G+QS E + L  LGR H+++EA  A+    H AR      + DL++ LP Q++TQ   +
Sbjct: 129 MGIQSFEPEKLLKLGRIHDSNEAKQAVRFAQHSARVGLRSFNIDLMHGLPNQSVTQALDD 188

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ ++    HLS YQLTIE  T+FY         LP ++   D++     + +  G   
Sbjct: 189 LRQGIALNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTDAGYEQ 244

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 245 YETSAYAKKGYQCQHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR--- 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             G     +E + ++ +  EF M   RL E     ++E   G
Sbjct: 302 --GEYRYHQEMIENDDRPFEFFMNRFRLLEATPKTEFEAYTG 341


>gi|169634496|ref|YP_001708232.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii SDF]
 gi|169153288|emb|CAP02394.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii]
          Length = 384

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/382 (35%), Positives = 212/382 (55%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   +L   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVELAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+     H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKTAVEQGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFI 368
              H  ++K  + +++   EF+M  LRL +G+  + +E   G +L D+       R   +
Sbjct: 302 AE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELYEQRTGLSLNDLNDVLTSLRSRKL 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
                 RL CT++G   L+SV+
Sbjct: 359 LVEDSGRLACTEQGHIFLNSVL 380


>gi|117919637|ref|YP_868829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. ANA-3]
 gi|117611969|gb|ABK47423.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. ANA-3]
          Length = 385

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 195/340 (57%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF GG
Sbjct: 14  LSLYIHIPWCVQKCPYCDFNSHGQNGELPQKAYVDTLLADLRQDLHLVQGRKLHTIFIGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  ILDG       S ++EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 74  GTPSLFDANQIKRILDGANALIPFSDDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA  A   A    +   + DL++ LP Q+  +   ++  A + 
Sbjct: 134 SFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAAL 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 194 NPPHLSWYQLTIEPNTLFHSKPPQ----LPDDEDLWQIYEQGQQKLAALGYEQYEISAYA 249

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V +   +R+  +++ KHP+ +L     N H  
Sbjct: 250 KPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYL--AADNYH-- 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E+  ++ E +A E+LM  LRL   I  +++E   G + D
Sbjct: 306 FEQTEVAEEDRALEYLMNRLRLMTPIPKQEFEDRTGLHRD 345


>gi|110806863|ref|YP_690383.1| coproporphyrinogen III oxidase [Shigella flexneri 5 str. 8401]
 gi|110616411|gb|ABF05078.1| putative oxidase [Shigella flexneri 5 str. 8401]
          Length = 378

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 186/325 (57%), Gaps = 11/325 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAAAAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREG 340
             +  + +  +  EF M   RL E 
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEA 321


>gi|330963814|gb|EGH64074.1| HemN family oxidoreductase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 404

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 206/377 (54%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+K PYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKSPYCDFNSHTASPVLPEQEYVDALLADLDLDLSHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +      
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHSDGRIIRTWKTRLPKDYLNPDKPFQAGA 326

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 327 ---KLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHEDP- 382

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 383 ARLIATPQGQLFLNDLL 399


>gi|160872485|ref|ZP_02062617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsiella grylli]
 gi|159121284|gb|EDP46622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsiella grylli]
          Length = 391

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 193/336 (57%), Gaps = 10/336 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+C++KCPYCDFNSH     + ++N++   L +++   +    R I SIF GG
Sbjct: 19  LSLYIHFPWCIRKCPYCDFNSHTLVTALPEKNYMNRMLNDLEQDLEKICNRPILSIFMGG 78

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  P+ +  +L  +AK    S ++EIT+EANP + + ++F GYR+AG+ R+SLG+Q
Sbjct: 79  GTPSLFSPEALNYLLTELAKRLEFSVDIEITLEANPGATDYSHFSGYREAGITRLSLGIQ 138

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L+ LGR HN  EA  A+  A+   F  ++ DL++ LP+Q +T+   +L++A+  
Sbjct: 139 SFSTEKLKILGRIHNGDEAFKAVSAAKIAGFTNINLDLMHGLPQQRLTEGLEDLRKAVLL 198

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLT+E  T FY         LP+E    +L    +          YEIS  S
Sbjct: 199 EPTHISWYQLTVEPNTEFYLKPPQ----LPTEEEVWELQEKGKEYFQQKAYTQYEISALS 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
                 +HNLNYW++GDYIGIG GAHS++     ++       K+P+++L   +KN    
Sbjct: 255 KKRYRCVHNLNYWQFGDYIGIGAGAHSKITDCEKKIIRRTRKLKNPKAYL--AQKNDFLA 312

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            EK  L  +    EF++  LRL + I ++ ++   G
Sbjct: 313 EEKIILDKDLPF-EFMLNALRLHQKIPIELFQQRTG 347


>gi|220932120|ref|YP_002509028.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Halothermothrix orenii H 168]
 gi|219993430|gb|ACL70033.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Halothermothrix orenii H 168]
          Length = 385

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 135/383 (35%), Positives = 212/383 (55%), Gaps = 19/383 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+H+PFC++KC YCDF S ++  +     +++S L E++   +    + I +I+ GG
Sbjct: 11  FGLYIHFPFCLRKCSYCDFYS-IKYTQEFANKYVESLLKEIKIYSKKIPTKKIKTIYLGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP L     +  I D I  N++VS   EIT+EANP S+ +   + ++K G+NR+SLGVQ
Sbjct: 70  GTPGLFTYNQLYRIFDFIFNNFSVSEEGEITLEANPGSLTLEKIKYFKKLGINRLSLGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  E  L+ LGR H++ +A   + L   +F   + DLI+A+P Q+M  WE  L++ L   
Sbjct: 130 SFVEDELKLLGRFHSSKKAREVLLLINRVFDNYNTDLIFAIPGQSMDNWEYSLKQILELK 189

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLY L +EKGTL YK  K G++   S+ V   +Y   +      G   YEISN + 
Sbjct: 190 PPHLSLYNLQLEKGTLLYKKVKKGEIKPVSDEVDARMYLKAKKQLGKAGYLHYEISNFAR 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS---RVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            G ES HN+ YW+Y  Y+G+GP AHS   + +  ++       KH E        NG   
Sbjct: 250 PGFESRHNILYWKYEPYLGLGPAAHSFTGKTRFNNYSNLTPYIKHLE--------NGVLP 301

Query: 316 VEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER---- 370
           V+    L  E+   E++++GLRLR+GIS K+++   G +L  E   N +    IE+    
Sbjct: 302 VDNTVRLDREEMMSEYIILGLRLRKGISFKEFKECFGVDLK-EIYYN-KITELIEKDLIH 359

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           ++  R++ T++G+ + + V    
Sbjct: 360 IKGDRIQLTEKGLLLGNQVFVEF 382


>gi|30248297|ref|NP_840367.1| coproporphyrinogen III oxidase [Nitrosomonas europaea ATCC 19718]
 gi|30138183|emb|CAD84189.1| Coproporphyrinogen III oxidase and related FeS oxidoreductases
           [Nitrosomonas europaea ATCC 19718]
          Length = 399

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 210/384 (54%), Gaps = 19/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            LG+Y+H P+CV+KCPYCDFNSH       + +  ++ +   +++    L   R ++S+F
Sbjct: 19  PLGLYIHLPWCVRKCPYCDFNSHAINSGGDLPESEYVTALKRDLELALPLIWGRPVTSVF 78

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL     I  IL  +     ++  VEIT+EANP ++E   F  +  AG+NR+S+
Sbjct: 79  FGGGTPSLFSATAIDAILSHVRMLLPLAPGVEITLEANPGTLEAQKFTDFHSAGINRLSI 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   + L+ LGR H+ +EA+ A  LA   F  ++ DL+YALP QT  +   +++ A 
Sbjct: 139 GIQSFNSRHLQALGRIHDGAEALRAAELALQHFSNVNLDLMYALPGQTRDEALQDIETAC 198

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  V H+S Y LTIE  T FY+        LP E+ + D+  + + I +  G   YE S 
Sbjct: 199 NRGVAHISAYHLTIEPNTPFYRYPPQ----LPDEDTSADMQVMIEHILAERGYRHYETSA 254

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G   LHN+NYW+YGDY+GIG GAHS++      +     KHP  +L+     G+A 
Sbjct: 255 FAQPGKPCLHNMNYWQYGDYLGIGAGAHSKISFRDRIIRQMRHKHPRQYLEQAMA-GNAC 313

Query: 316 VEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
           +E   L++EQ+        EF+M  LRL EG     +    G  +    +++L   +++G
Sbjct: 314 LEN-LLATEQEVGPQDRIFEFMMNALRLTEGFDPGLFHTRTGLTI-ASIQKSLAEAEQRG 371

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            IE  Q   +R T  G   L+ ++
Sbjct: 372 LIE-WQHDCIRPTPEGRRFLNDLL 394


>gi|269468265|gb|EEZ79949.1| coproporphyrinogen III oxidase [uncultured SUP05 cluster bacterium]
          Length = 397

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 130/379 (34%), Positives = 212/379 (55%), Gaps = 28/379 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CVKKCPYCDFNSH    + G   +I++ L ++    +    RSI SIF GG
Sbjct: 29  LSLYIHYPWCVKKCPYCDFNSHEGEDRNG---YIEALLKDLDKDLKYVQGRSIHSIFIGG 85

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +  G+    T   N+EIT+E NP + EV+ F+ ++  G+NR+S+GVQ
Sbjct: 86  GTPSLMSADELHELFTGLKSKLTFEKNIEITLETNPGTFEVDKFKAFKDIGINRLSIGVQ 145

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L  LGR H+A +A  A   A  IF   + DL+Y L  Q++     +L +A+  +
Sbjct: 146 SFQDRHLNALGRIHSAEDASKACTYASQIFNNFNIDLMYGLEGQSIDDCLSDLNQAIDLS 205

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ---SITSAHGLHAYEISN 255
             H+S YQLTIE  TLF K        LP ++   D++ + +   ++   HG   YE+S 
Sbjct: 206 PQHVSFYQLTIEPNTLFAKFPP----TLPKDD---DIWRMGEQGVALLEQHGFERYEVS- 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNGH 313
            +F    S HNLNYWR+GDYIGIG GAH ++ +  + +V  +++ K P+ +++   K   
Sbjct: 258 -AFGKIPSKHNLNYWRFGDYIGIGAGAHGKITESKTGKVVRTLKSKSPKEYIQNRNKTLE 316

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERV 371
            +    F        EF++  LRL+ G  V  ++   G+++++  E  +  +  G +   
Sbjct: 317 VIDNLSF--------EFMLNALRLKNGFDVDLFKARTGKDINVINEQLKRAESMGLVNLT 368

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  R+  T++G   L+ +I
Sbjct: 369 K-DRITPTKKGFDFLNDLI 386


>gi|115374326|ref|ZP_01461610.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stigmatella aurantiaca DW4/3-1]
 gi|310818994|ref|YP_003951352.1| oxygen-independent coproporphyrinogen III oxidase [Stigmatella
           aurantiaca DW4/3-1]
 gi|115368636|gb|EAU67587.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stigmatella aurantiaca DW4/3-1]
 gi|309392066|gb|ADO69525.1| oxygen-independent coproporphyrinogen III oxidase [Stigmatella
           aurantiaca DW4/3-1]
          Length = 401

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/385 (36%), Positives = 209/385 (54%), Gaps = 27/385 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--- 68
           TG  +   G+Y+H+P+C+ KCPYCDF   V R +V +E +  + L E+   R    P   
Sbjct: 11  TGMPAARFGLYLHFPYCLAKCPYCDFAVAVAR-QVPEERYAHAVLAELD-ARLAATPELR 68

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R + S+F GGGTPSL  P+ +A +L+GIA    V    E+++EANP + +   F GY+ 
Sbjct: 69  ERPLESLFLGGGTPSLWHPRWVAQVLEGIAARMKVVPGAEVSLEANPEAADAERFAGYQA 128

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           AGVNR+SLGVQS + ++L+ LGR H+A+    A     R  F  +S D IY    QT  Q
Sbjct: 129 AGVNRLSLGVQSFQPETLKALGRAHDAAGVEAAFRAARRAKFASVSMDFIYGAHGQTRAQ 188

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQS 241
            E + ++A++   +HLS Y LT+E+  L       K    G++ LP ++  VD+    + 
Sbjct: 189 VEADARQAVALEPEHLSTYALTLEREALAEDTPLAKRLARGEVALPPDDEVVDMAATLRE 248

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +AHGLH YEISNH+  G  S HN  YW  G+Y+ +G GA   + V S    +++ +  
Sbjct: 249 VYAAHGLHRYEISNHARPGYSSRHNTLYWTGGEYLALGVGATGMLHVPSPHRYVNL-RST 307

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           E++L+   +       +E LS E    E L MGLRLR G++   WE L        CE  
Sbjct: 308 EAYLRAAEQGLLPEASREALSREDLFAERLSMGLRLRSGVA---WEAL--------CEAY 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTML 386
            Q +    R + +RL   Q G+ +L
Sbjct: 357 GQ-EAQPRRGEVARL--VQHGLALL 378


>gi|307250085|ref|ZP_07532048.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306857882|gb|EFM89975.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
          Length = 385

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 192/349 (55%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT      G R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQLAIGNRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++  G +  HNLNYW +GDY+ IG GAH +V   +  +   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKGYQCRHNLNYWHFGDYLAIGCGAHGKVSYPTGEIYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|332829160|gb|EGK01824.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 376

 Score =  228 bits (582), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 209/380 (55%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF  + R     + N++ +   EM+  +       + +I+FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDF--YTRTDMSPKHNYVSAVCREMELRKHYISNEIVKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   +   I D I  N+TV+S+ EIT+EANP  ++    +  R+   NR+S+G+QS
Sbjct: 61  TPSQLSYGDFQRIFDTIRANFTVASDAEITMEANPDDLDTKYLETLRRLPFNRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+FL R H+A  AI A+ L ++  +  +S DL+Y LP QTM  W+  L++A++  
Sbjct: 121 FDDNELKFLKRRHSAERAIDAVSLCKSSGYNNISIDLMYGLPNQTMDIWQRNLEQAINLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y L  E+GT  Y++ K GD+    E+++V +++      SA G   YEISN + 
Sbjct: 181 VQHISSYHLIYEQGTRLYRLFKLGDVKPVDEDLSVQMFSAMIDSLSAAGFQHYEISNFAR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA--VV 316
            G  S HN +YW    Y+G+GP AHS      H  A +I     S  K V   G A   +
Sbjct: 241 NGLYSKHNSSYWLGEKYLGLGPAAHS---FDGHNRAWNI----PSISKYVEAIGQANPAI 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
           E E L      ++F++ G+R   G+ +   E   G ++   C +N+Q+   QGF+     
Sbjct: 294 ETECLDKNTSYNDFILTGMRTMWGVDLVVMESRFGTSMKDYCMKNVQKYINQGFVTNND- 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           + L+ T+ G+ + D ++++L
Sbjct: 353 NVLKLTREGIFISDGIMSDL 372


>gi|238752328|ref|ZP_04613807.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia rohdei ATCC 43380]
 gi|238709489|gb|EEQ01728.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 206/370 (55%), Gaps = 22/370 (5%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  +  V  + +++  L ++     L G R +S+IF GGGTPSL+  + 
Sbjct: 1   MQKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVPLVGNREVSTIFIGGGTPSLLSAEA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +LDG+     +++  EIT+EANP +VE + F GY++AG+NRIS+GVQS   + L  L
Sbjct: 61  MQQLLDGVRARLPLAAGAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAEKLTRL 120

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++    HLS YQL
Sbjct: 121 GRIHGPQEAKRAAELATSLKLRSFNLDLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  T F          LP ++   D++     + SA G   YE S ++  G +  HNL
Sbjct: 181 TIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNGHAVVEKEFLSS 323
           NYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++   + ++   A V++ F   
Sbjct: 237 NYWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQGKYLDKQYEVAAVDRPF--- 293

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQ 380
                EF M   RL E     D+    G     +  + +  L ++  IE  ++ ++  T+
Sbjct: 294 -----EFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEEYWQI--TE 346

Query: 381 RGMTMLDSVI 390
           +G   L+S++
Sbjct: 347 KGKLFLNSLL 356


>gi|119900254|ref|YP_935467.1| coproporphyrinogen III oxidase [Azoarcus sp. BH72]
 gi|119672667|emb|CAL96581.1| coproporphyrinogen oxidase [Azoarcus sp. BH72]
          Length = 407

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/377 (36%), Positives = 200/377 (53%), Gaps = 10/377 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTGPRSISSI 74
            L +YVH+P+CV+KCPYCDFNSH  R +        +          + Q+ G R + SI
Sbjct: 31  PLALYVHFPWCVRKCPYCDFNSHAPRGETAIPEEAWAAAVVADLEAALPQVWG-RRVHSI 89

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +  +L  I     +    EIT+EANP +VE   F+ +R AGVNR+S
Sbjct: 90  FIGGGTPSLMSAPVLDRLLTDIRMRLPLDPMAEITLEANPGTVEAARFRDFRAAGVNRLS 149

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS ++  L  LGR H + EA  AI  A   F R++ DL+YALP+Q +     +L  A
Sbjct: 150 LGVQSFDDAMLLRLGRIHGSDEAKRAIEGALAHFERVNIDLMYALPQQGLDAALADLDTA 209

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L + V HLS Y LT+E  T F          LP ++ A D+ +  ++  +A G   YE S
Sbjct: 210 LGFGVTHLSCYHLTLEPNTPFAHDPP----PLPDDDSAADMQDAIEARLAAAGFRHYETS 265

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
             +  G E  HNLNYW++GDY+GIGPGAH ++      V     KHP+ +L+   + G  
Sbjct: 266 AFARPGQECRHNLNYWQFGDYLGIGPGAHGKLSNHEGIVREMRHKHPQRYLEGAAR-GDF 324

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQF 373
           V E+  ++  +   EF+M  LRL  G  +  +    G  L  +E      RQ  +  +  
Sbjct: 325 VQERRSVTVAELPFEFMMNALRLTGGFPLALFAARTGLPLAAVEARLRAARQDGLLEIDA 384

Query: 374 SRLRCTQRGMTMLDSVI 390
             +R T+RG   L+ ++
Sbjct: 385 DSVRPTERGRHFLNDLL 401


>gi|158320265|ref|YP_001512772.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus oremlandii OhILAs]
 gi|158140464|gb|ABW18776.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus oremlandii OhILAs]
          Length = 379

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 195/328 (59%), Gaps = 6/328 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NS+ +Y+H PFC KKC YCDFNS+  +  +  + +I++   EMQ   ++    S++++FF
Sbjct: 2   NSIALYIHIPFCEKKCHYCDFNSYSGKNHL-VDGYIKALKKEMQQYGEIIKGHSVATVFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + +A I++ + + +T+    EI++EANP ++  +  + Y K+G+NR+S+G
Sbjct: 61  GGGTPSILTGEQMAEIMETLRRYYTLEEQAEISMEANPGTLNFHKLKAYYKSGINRLSMG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ LGR H+  E +  +  AR   F  ++ DL+++LP QT   W+  L++ +
Sbjct: 121 LQSCQNHLLKTLGRIHSFEEYVKNLEDARKAGFTNINTDLMFSLPGQTERDWQESLEKIV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  + H+S Y L +E+GT F+   ++  ++LP E V +++Y+ T     + G H YEISN
Sbjct: 181 SLGIPHISAYSLIVEEGTPFFSWVENKKIILPDEEVDMNMYHYTIEYLKSRGYHHYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN+ YW    YIG+G GAHS            I+K    ++ ++ +    V
Sbjct: 241 YAKNGFECKHNITYWHNEHYIGLGAGAHSYFDQKRFNNFADIDK----YIHLLGEGSSPV 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISV 343
            E+  +S   +  E + +GLR+ EGIS+
Sbjct: 297 EEEILVSKNDEIAETMFLGLRMMEGISI 324


>gi|145300323|ref|YP_001143164.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142853095|gb|ABO91416.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 381

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 197/342 (57%), Gaps = 12/342 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++    ++ + L ++    +    R +SSIF G
Sbjct: 6   PLSLYIHVPWCVQKCPYCDFNSHAQKGELPHLEYVAALLEDLDLDLKWAQGRPLSSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLTVEAMQTLLDGVRARIPLTPDCEITMEANPGTVEADKFAGFKQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H   E   AA        P  + DL++ LP Q++     +LQ+A+ 
Sbjct: 126 QSFQQEKLTRLGRIHGPEEARKAAALAHAIALPTFNLDLMHGLPDQSLDDALYDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F          LP ++   D+Y    ++ +A G   YEIS +
Sbjct: 186 CAPPHLSWYQLTIEPNTAFASKPPR----LPEDDTLWDIYEQGHAMLTARGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++  + S ++  S + KHP+ +L   R     
Sbjct: 242 AKAGYQCRHNLNYWRFGDYLGIGCGAHGKMTDLASGQILRSAKVKHPKGYLDPAR----P 297

Query: 315 VVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLD 355
            ++K++  +E +   E+ M   RL E     ++E   G  L+
Sbjct: 298 YLDKQWQVTEDELPLEYFMNRFRLFEPAPKAEFEAYTGLGLE 339


>gi|148244382|ref|YP_001219076.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326209|dbj|BAF61352.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 372

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 210/377 (55%), Gaps = 21/377 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CVKKCPYCDFNSH    + G   +I+S L ++         R+I SIF GG
Sbjct: 10  LSLYIHYPWCVKKCPYCDFNSHDCNQRSG---YIESLLEDLNEDLDYIQGRAIQSIFLGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q +  +  G+ K     +++EIT+E NP   E+  F+ ++  G+NR+S+GVQ
Sbjct: 67  GTPSLMSEQELFKLFTGLKKRLKFVNDIEITLETNPGIFEIEKFKLFKHIGINRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+ LGR HNA EAI A   A  + F   + D++Y L +QT+ +   ++++A++ 
Sbjct: 127 SFNDRHLQSLGRIHNADEAIYACKQANQVGFKYFNIDIMYGLERQTLDECLSDVRQAMNL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DH+S YQLTIE  T F K       +LPS+ V   + +   S+   +G   YE+S  +
Sbjct: 187 KPDHISFYQLTIEPNTYFAKYTP----ILPSDEVVWQMGDAGVSLLERNGYTRYEVS--A 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAV 315
           F    S HNLNYW++GDY+GIG GAH ++ +          K   P+ +LK  +K  + +
Sbjct: 241 FGKTPSKHNLNYWQFGDYVGIGAGAHGKITLLKESFPFRTIKARLPKDYLKNRQKQVNQI 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQFS 374
               F        +F++  LRL+ G +++ +E+   + +  IEC+ N  +   +  +   
Sbjct: 301 KNLNF--------DFMLNALRLKHGFNLRLFELRTRQPIQVIECQLNKAKALGLFELDGK 352

Query: 375 RLRCTQRGMTMLDSVIA 391
             + +++G   L+ + A
Sbjct: 353 LAKPSKKGFDFLNDLQA 369


>gi|222529543|ref|YP_002573425.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456390|gb|ACM60652.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 376

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 217/380 (57%), Gaps = 19/380 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISS 73
           ++G+Y+H PFC +KC YCDF S    Y+   ++ I ++ +    E+ + ++      I +
Sbjct: 3   NIGLYIHVPFCKRKCYYCDFVS----YENVNDDVIFAYFSALENELIYYKE-NYDIEIDT 57

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS I    I  +L+ I  N+ + SN EITIEANP S+     Q Y  AGVNR+
Sbjct: 58  IYLGGGTPSSISANYILKLLEFICSNFKIKSNCEITIEANPESITHKKLQSYSLAGVNRL 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QSL +  LR +GR H++  A+  +      F   S D+I  LP QT   +   L  
Sbjct: 118 SIGIQSLNDVELRAIGRVHDSEVALKILSRVPLYFENFSVDVITGLPYQTFKSFMQTLNT 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L ++  H+S+Y L IE+GT  ++ +++   +LPSE+    ++   + I S  G++ YEI
Sbjct: 178 LLEFSPPHVSIYSLKIEEGTFLFERYEEYKSLLPSEDEERRMFWWAKRILSEIGIYHYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HNL YW   +YIG+G  AHS      +    +I +    ++K +++NG 
Sbjct: 238 SNFAKKGFECKHNLKYWNVEEYIGVGCAAHSFFNGCRYYNTSNINE----YVKKIKENGL 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIE 369
           A+ EKE +S E++  EF+++GLR  EG+S++++    G    R  + + E+ L++ G IE
Sbjct: 294 AIEEKEIISCEEREKEFIILGLRKIEGLSLEEFRKRFGVEFERKYNSQIEK-LKKYGLIE 352

Query: 370 RVQFSRLRCTQRGMTMLDSV 389
            V  + LR T+RG+ + + V
Sbjct: 353 -VSNNYLRLTERGIDLANLV 371


>gi|307254679|ref|ZP_07536507.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307259123|ref|ZP_07540853.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306862352|gb|EFM94318.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306866790|gb|EFM98648.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 385

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 192/349 (55%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT      G R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQLAIGNRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKSYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|197119870|ref|YP_002140297.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           bemidjiensis Bem]
 gi|197089230|gb|ACH40501.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Geobacter bemidjiensis Bem]
          Length = 381

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 193/327 (59%), Gaps = 5/327 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFG 77
           G+Y+H+PFC+KKC YCDFNS        +E +++  L EM  +RQ  L  P S  +++ G
Sbjct: 4   GLYLHFPFCLKKCLYCDFNSTPATGDDHRE-YVELLLKEMA-LRQAALPEPVSAPTLYLG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ + LI+     N+++  + E+T+EANP ++     QGYR AGVNR+SLG+
Sbjct: 62  GGTPSLMAPELVGLIVAAARDNFSLEPDAEVTLEANPGTLTPERLQGYRMAGVNRLSLGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS E++ LR LGR H+++EA++A   AR   F  +S DL+++LP Q+++QW   L+ A+S
Sbjct: 122 QSFEDRLLRRLGRVHSSAEALSAFQDARRAGFDNISIDLMHSLPGQSLSQWREALELAVS 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L+IE+GT F ++H++G L LPSE  A  ++  T  + SA G   YEISN+
Sbjct: 182 LDPEHVSAYALSIEEGTPFERLHEEGALALPSEEEAAAMFEATSDVLSAAGYRHYEISNY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW    Y+G G GAHS                  ++   +R       
Sbjct: 242 AKPGRHSRHNSAYWSRVSYLGFGAGAHSFWNPDGLGRRWKNPGDAAAYAAGIRAGLPVDE 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E E L+ E    E   +GLR+ +G+ +
Sbjct: 302 EPEQLTLEDALSECFFLGLRMLDGLDL 328


>gi|332981294|ref|YP_004462735.1| oxygen-independent coproporphyrinogen III oxidase [Mahella
           australiensis 50-1 BON]
 gi|332698972|gb|AEE95913.1| oxygen-independent coproporphyrinogen III oxidase [Mahella
           australiensis 50-1 BON]
          Length = 379

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 213/386 (55%), Gaps = 22/386 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++S+G+Y+H PFC KKC YCDF S+       Q  +  + + EM     + G + IS++F
Sbjct: 2   ADSIGLYIHVPFCAKKCLYCDFTSYAGVLD-KQYVYKDAIIKEMGMRANIIGNKHISTLF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS+++   I  I+D + KN+ V  N E+TIE NP +V V N   Y+  G+NR+S+
Sbjct: 61  IGGGTPSIVDTTVINAIIDEVYKNFHVDQNAEVTIEINPGTVSVKNLTDYKSIGINRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ +++ L+ +GR H ++E + + + AR + F  ++ DL++ LP+QT+ QW   LQ  
Sbjct: 121 GLQAWQDELLKAIGRIHTSAEFVNSYNEAREVGFDNINVDLMFGLPQQTIGQWIRTLQAV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   +H+S Y L IE+GT  +KM   GD+    EN    +Y    ++  + G   YE+S
Sbjct: 181 VSLGPEHISCYDLQIEEGTPMHKMVVGGDIKPLDENTDRLMYKTATALLRSEGYERYEVS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G    HNLNYW  G Y+G+G  AHS +      +  +     +S++  +  +   
Sbjct: 241 NFAKPGFRCRHNLNYWHNGPYVGLGCAAHSHLD----HIRWANVSGLQSYIDTILDDNIP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG-FIERVQF 373
           +  +E++  + +  E +M+GLR  EG+  K +E   G  L        QR G  I+++  
Sbjct: 297 IAFEEYIDRDTEMFETMMLGLRTSEGVDKKLFEERFGIRL-------YQRYGHVIDKLSA 349

Query: 374 --------SRLRCTQRGMTMLDSVIA 391
                   S ++ + +G+ +L+SV+ 
Sbjct: 350 MGLMHNDESAVKVSDKGVDVLNSVLV 375


>gi|300113391|ref|YP_003759966.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           watsonii C-113]
 gi|299539328|gb|ADJ27645.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           watsonii C-113]
          Length = 385

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 208/373 (55%), Gaps = 15/373 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CV+KCPYCDFNSH    ++ +  +I + + +++        R I SIF GG
Sbjct: 10  LALYIHFPWCVRKCPYCDFNSHALPKELPETAYIDALVRDLEQDLPRVWGRRIHSIFMGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +++  +L  +      S  +EIT+EANP +VE   F  +   G+NR+SLGVQ
Sbjct: 70  GTPSLFSAESLDRLLSAVRARLPWSPQIEITLEANPGTVEQGRFTEFHHIGINRLSLGVQ 129

Query: 139 SLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S  +++L+ LGR H++ E   A+AA H A   F  ++ DL++ LP QT TQ   ++  A+
Sbjct: 130 SFNDKALKHLGRIHSSQESCQAVAAAHTAG--FDNINLDLMFGLPGQTETQALADVAMAV 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A  H+S YQLT+E  T FY+        LP E          Q+  +  G H YE+S 
Sbjct: 188 SLAPHHISYYQLTLEPHTYFYRYPPS----LPHEEAINTWQTDCQAHLAQAGYHRYEVSA 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVA-ISIEKHPESWLKMVRKNGH 313
            +    +  HNLNYWR+GDY+GIG GAH ++     +R+  +   KHP S+L        
Sbjct: 244 FAKSDQQCQHNLNYWRFGDYLGIGAGAHGKISDAMENRITRLWKIKHPTSYLAKA-GTPE 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ- 372
            +  +   S ++ A EF++  LRL+EG   + ++  AG  L +  E+ L +   +E ++ 
Sbjct: 303 GIGGETNPSPQEAAFEFMLNALRLKEGFPSRLFQERAGLPLSV-VEKTLYQAEALELIEW 361

Query: 373 -FSRLRCTQRGMT 384
            F  +R T++G +
Sbjct: 362 DFRHIRPTEKGFS 374


>gi|289209632|ref|YP_003461698.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
 gi|288945263|gb|ADC72962.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
          Length = 400

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 212/379 (55%), Gaps = 17/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  R +V  + ++++ + +++        R + S+F G
Sbjct: 9   PLALYVHLPWCVRKCPYCDFNSHEPRGEVPFDAYVEALMRDLESQLPDVWGRRVDSVFIG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ +A +L G+     +  + EIT+EANP + +   F GYR+AGVNR+SLG+
Sbjct: 69  GGTPSLFPPEALADLLSGLRARLPLRPDAEITLEANPGTADRAYFHGYREAGVNRLSLGI 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H  +EA AA+  AR   F  ++ DL++ LP+Q++     +L+ A+ 
Sbjct: 129 QSFDDVMLERLGRIHGGAEAHAAVEHARAAGFDNINLDLMFGLPQQSVEAGLADLRAAIE 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S YQLT+E  T F         VLP ++   +L+   Q   +A G   YE+S +
Sbjct: 189 QEPEHISWYQLTLEPNTYFAARPP----VLPPDSTIEELFTQGQCALAAAGYTRYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI--SIEKHPESWLKMVRKN-GH 313
           +  G E  HN NYW +GDY+GIG GAH ++ + S    +  +  + P ++L+   ++   
Sbjct: 245 ATRGRECRHNRNYWTFGDYLGIGAGAHGKLTLPSQGRVLRRTKPRQPAAYLETPDQHRDQ 304

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
           AV E E         EF++  LRL EG+    +E   G +L         L+ +G +   
Sbjct: 305 AVPEAEL------PFEFMLNALRLVEGVPAHCFEERCGLDLTTLEPALGELRAEGLLVS- 357

Query: 372 QFSRLRCTQRGMTMLDSVI 390
              RL+ T+RG+  L+ ++
Sbjct: 358 DPQRLQPTERGLAFLNDIL 376


>gi|119775616|ref|YP_928356.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           amazonensis SB2B]
 gi|119768116|gb|ABM00687.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella amazonensis SB2B]
          Length = 379

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/338 (38%), Positives = 185/338 (54%), Gaps = 11/338 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH ++  + QE ++ + L ++         R++ SIF GG
Sbjct: 8   LSLYVHIPWCVQKCPYCDFNSHGKQGDLPQEAYVDALLADLDADLNYVQGRTLYSIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  +LDGI        ++EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 68  GTPSLFDASAIGRLLDGIKARIPFCDDIEITMEANPGTLEHDDFSAYRGAGVTRLSVGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H   EA  A  LA    +   + DL++ LP Q+  +   ++  A S 
Sbjct: 128 SFSKDKLNLLGRIHGRDEATRAAELATAAGYQSFNLDLMHGLPNQSFDEAMADIDTAASL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 188 NPPHLSWYQLTIEPNTLFHSRPPQ----LPDDEALWHIYEQGQKKLAALGYEQYEISAYA 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V + +    I     KHP+ +L         +
Sbjct: 244 KPGFQCRHNLNYWQFGDYLGIGCGAHGKVTIPTENCIIRTVKIKHPKGYLAA----SDYL 299

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
            E   +  E +  EFLM  LRL   I+ +++E   G N
Sbjct: 300 SELTQVQEEDRPLEFLMNRLRLMTPIAKREFESRTGLN 337


>gi|219870503|ref|YP_002474878.1| coproporphyrinogen III oxidase [Haemophilus parasuis SH0165]
 gi|219690707|gb|ACL31930.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parasuis SH0165]
          Length = 383

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 187/342 (54%), Gaps = 18/342 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L +++      +     R I SI
Sbjct: 5   LSLYIHIPWCVQKCPYCDFNSHAQKGIIPEQEYIQHLLNDLEQDLISYKTAIADRKIHSI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   + I  +L  I K    S   EIT+EANP + E   F GY + GVNRIS
Sbjct: 65  FIGGGTPSLFSAEGIHYLLAEIRKRIDFSHECEITLEANPGTAEAERFIGYVQGGVNRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEME 190
           +G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q   +
Sbjct: 125 MGIQSFEPEKLLKLGRIHDSNEAKQAVRFAQNSARVGLRSFNIDLMHGLPNQSVAQALDD 184

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ ++    HLS YQLTIE  T+FY         LP ++   D++     + +  G   
Sbjct: 185 LRQGIALNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTDAGYEQ 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVR 309
           YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++   
Sbjct: 241 YETSAYAKKGYQCQHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR--- 297

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             G     +E + ++ +  EF M   RL E     ++E   G
Sbjct: 298 --GEYRYHQEMIENDDRPFEFFMNRFRLLEATPKTEFEAYTG 337


>gi|189424293|ref|YP_001951470.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           lovleyi SZ]
 gi|189420552|gb|ACD94950.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           lovleyi SZ]
          Length = 380

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 208/383 (54%), Gaps = 24/383 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGP--RSISSIFFG 77
           +Y+H P+C+ KC YC F+S  R  +  Q E      L EM+ +     P  + + S++FG
Sbjct: 5   LYIHIPWCLSKCGYCAFSS--RPLEPHQLEQTCHLLLREME-LAATVYPLNQPLRSLYFG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P+ ++ ++ G    +  SS +EIT+EANP +V +++  GY +AGV+R+SLG 
Sbjct: 62  GGTPSLLDPEQVSRLISGSQALFGHSSTIEITLEANPGTVSLDSLTGYYQAGVSRLSLGA 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +Q L+ LGR H A E   A  LA+   F  +  DLI  LP QTMT W+ +L  AL+
Sbjct: 122 QSFNDQLLQTLGRRHTAVETCNAFQLAQQAGFSSIGLDLICGLPDQTMTDWQQDLAAALA 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DHLS+Y LTIE+ T F   +  G   LP  +++  +     S  +A G   YEI+N 
Sbjct: 182 LQPDHLSVYGLTIEEETPFAGRYPVGSDALPDHDLSAGMLEEADSRLTAAGYDHYEIANF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHS------RVKVGSHRVAISIEKHPESWLKMVRK 310
           +  G  S HN  YW+   Y+GIGPGAHS       ++ G+  V        E+W   +  
Sbjct: 242 ARPGCRSQHNCGYWQRDGYLGIGPGAHSFLRQEWGIRWGNQSVF-------ETWAAAIHD 294

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGF 367
              A  E++ L+ E    E++ +GLR+ +GIS+  +    G  L+    E    LQ+ G 
Sbjct: 295 RKLAATEQQELTREDALSEYIFLGLRMADGISLNGFAEEFGERLEHRFSEAIHQLQQAGL 354

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +   Q  RL  T++GM + + V 
Sbjct: 355 LTCSQ-DRLCLTKQGMLLSNQVF 376


>gi|148359895|ref|YP_001251102.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           pneumophila str. Corby]
 gi|296107946|ref|YP_003619647.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281668|gb|ABQ55756.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           pneumophila str. Corby]
 gi|295649848|gb|ADG25695.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 375

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/334 (35%), Positives = 193/334 (57%), Gaps = 8/334 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + +  ++Q+ + +++        R I+SIF GG
Sbjct: 4   LSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYVQALIEDLKTDISSYNTREINSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    + + + +  + + N+EIT+EANP +VE + F  YR++G+NR+SLG+Q
Sbjct: 64  GTPSLFSAEAYNNLFNELKRMLSFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALSY
Sbjct: 124 SFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTALSY 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLTIE  T+FYK        LPSE     L     ++    G H YEIS  S
Sbjct: 184 QPEHLSWYQLTIEPNTVFYKHTPP----LPSEEEDYLLEEQGFALLHDSGYHRYEISAFS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L   +     +  
Sbjct: 240 KPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKP---YLAA 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +E ++ ++   EF++   RL + I ++ +    G
Sbjct: 297 RETITGKELLFEFMLNTTRLEQSIPLELFTTATG 330


>gi|66813964|ref|XP_641161.1| hypothetical protein DDB_G0280411 [Dictyostelium discoideum AX4]
 gi|74855863|sp|Q54VE8|RSAD1_DICDI RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|60469189|gb|EAL67184.1| hypothetical protein DDB_G0280411 [Dictyostelium discoideum AX4]
          Length = 446

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/420 (35%), Positives = 230/420 (54%), Gaps = 46/420 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----------RQLTGP 68
           + ++V+WP+C K CPYC+FN +    KV  E   +S   E++                  
Sbjct: 25  ISLFVYWPYCSKICPYCNFNKYRDSDKVDHERMSKSLSRELESFVKNIYLNSNENSFIRE 84

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS---SNVEITIEANPSSVEVNNF-QG 124
           R I+SI+FGGGTPSL +       ++ + K +  S    ++EIT+E NP   ++ N  + 
Sbjct: 85  RPITSIYFGGGTPSLAKISTFVETIETMKKLFPSSLSIEDIEITLEVNPDQKDLKNLLKD 144

Query: 125 YRK-AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP-KQ 182
           ++K  GVNR+SLGVQSL ++ L FLGR HN  +A  +I +AR++F  ++FDLIY+    Q
Sbjct: 145 FKKYVGVNRVSLGVQSLVDKDLHFLGRTHNRIQAEESIKIARDLFDHVTFDLIYSRTIDQ 204

Query: 183 TMTQWEMELQRALSYAV--DHLSLYQLTIEKGTLFY-KMHKDGD---LVLPSENVAVDLY 236
           T+ QW  EL+ AL+ A    H+SLY LT E+GT FY ++   G+   ++ P +  + DLY
Sbjct: 205 TLEQWRNELRYALNLADGNGHVSLYTLTFEQGTSFYRRLSSKGNKFKIIPPDDQKSSDLY 264

Query: 237 NLTQSITSAHGLHAYEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS----- 290
           +LT     A G   YEIS+  S    +  HNLNYWR GD+IGIGPGA SR+   +     
Sbjct: 265 DLTVCEAEAMGFQQYEISSFASSHNQKGKHNLNYWRSGDFIGIGPGASSRLTTLNNNNNN 324

Query: 291 ----HRVAISIEKHPESWLKMVRKN---GHAVVEKEF-----LSSEQQADEFLMMGLRLR 338
                R +     HP+ W++ +       +A +E EF     L++ + A+E L+ GLR  
Sbjct: 325 NNQISRYSFKNILHPKEWMEKLNSKEILCNAFIEDEFNPTIPLTNFEVAEEMLLNGLRTI 384

Query: 339 EGISVKDWE-----MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           EG+ +  +      +   + L+++    LQ QGF+  ++ + L+ T  G  +LD++I  +
Sbjct: 385 EGVQLSTFTFQTNGLTFDQFLNMKQVEILQEQGFL-ILEPTCLKLTGNGRKLLDTIIPKI 443


>gi|326797256|ref|YP_004315076.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
 gi|326548020|gb|ADZ93240.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
          Length = 390

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 214/386 (55%), Gaps = 21/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRY----KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +Y+H P+CV+KCPYCDFNSH   R+    K+ ++ ++   L +++        R I 
Sbjct: 8   PLSLYIHAPWCVRKCPYCDFNSHQADRFEENGKLPEDAYLDQLLADLEVDLPYVANRPIQ 67

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           + F GGGTPSL+ P     +++ +        + EIT+EANP + E   F  +R+AG+NR
Sbjct: 68  TAFIGGGTPSLMSPDFYYRLMEALKSKLAWVDDAEITMEANPGTFEQEKFAHFRQAGINR 127

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS     L+ LGR HN  EAI A+  +R   F  ++ DL++ LP Q++     +L
Sbjct: 128 LSIGIQSFHTNLLKTLGRIHNREEAIMAVEKSRLAGFDNINLDLMHGLPDQSVDMALKDL 187

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q A+  A +HLS YQLTIE  T FY+   +    LP +N    + +   ++  + G   Y
Sbjct: 188 QLAMDLAPEHLSWYQLTIEPNTEFYRRPPE----LPEDNTLWGIQDEGLALLESQGYQQY 243

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRK 310
           E+S ++  G  + HNLNYWR+GDY+GIG GAH ++ + +  +  + + +HP  +L  + +
Sbjct: 244 EVSANARAGKHAQHNLNYWRFGDYLGIGAGAHGKITLENGEIFRTRKTRHPNHYLSNLPE 303

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQG 366
              A+  KE + +E    EF+M  LRL E   + D+       A   L   C++ L+  G
Sbjct: 304 ---ALGTKEQIETEDLPLEFMMNRLRLFETFDLADFSRFTYREAPEKLIAGCQKALEL-G 359

Query: 367 FIERVQF--SRLRCTQRGMTMLDSVI 390
           FI++  +   +++ T +G   L+ ++
Sbjct: 360 FIDQDAWHECKVKTTSKGKLFLNELL 385


>gi|85712854|ref|ZP_01043896.1| Uncharacterized Fe-S oxidoreductase [Idiomarina baltica OS145]
 gi|85693318|gb|EAQ31274.1| Uncharacterized Fe-S oxidoreductase [Idiomarina baltica OS145]
          Length = 383

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 212/383 (55%), Gaps = 19/383 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  +  + ++ +I   L ++         R+I SIF GG
Sbjct: 8   LSLYIHIPWCVEKCPYCDFNSHKIQGSIPEQAYISRLLDDLSADLGGVQGRAIQSIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+I  + I  +LDG+ K  T++S+ EIT+EANP + EV  F G+  AGVNR+S+G+Q
Sbjct: 68  GTPSVITAEGIQRLLDGVRKRLTLASDCEITLEANPGTFEVERFAGFINAGVNRLSIGIQ 127

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL  + LR LGR H+  +A  AA H ++      + DL++ LP Q+      +L+  ++ 
Sbjct: 128 SLNAEHLRTLGRIHDPLQARTAAEHASQLPLKSFNLDLMHGLPGQSAHDALSDLEGVIAL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T+F          LP ++    +Y          G   YE+S + 
Sbjct: 188 NPPHISWYQLTIEPNTMFASRPPQ----LPDDDTLWAIYQRGHERLLKAGYQQYEVSAYC 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
             G +SLHN NYW +GDY+GIG GAHS++ +         E  KHP+ +L + R    A+
Sbjct: 244 KPGHQSLHNTNYWEFGDYLGIGCGAHSKITLPEQHKIRRCEKVKHPQGYLDLTR----AL 299

Query: 316 VEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNL---QRQGFIER 370
             +E+ +  E+++ EF M   RL + +S + +    G  L IE  +R L   +R+G++E 
Sbjct: 300 RYREWDVDPEERSFEFFMNQFRLFQPVSKQQFTDFTG--LPIEHGDRALDEAKRKGWVES 357

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
                 + +Q G   L+ V+  L
Sbjct: 358 -DGDHWQLSQLGHRFLNDVLTTL 379


>gi|260549185|ref|ZP_05823406.1| coproporphyrinogen III oxidase [Acinetobacter sp. RUH2624]
 gi|260407913|gb|EEX01385.1| coproporphyrinogen III oxidase [Acinetobacter sp. RUH2624]
          Length = 384

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 216/384 (56%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSSELEQIYLKALVADFETQVEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +        N EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKLLLKFEDNCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKMAVEHGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWEFGDYLAIGAGAHGKVTQSDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQ-RQG 366
              H  ++K  + +++   EF+M  LRL  G+    ++   G +LD   +   +L+ R+ 
Sbjct: 302 AE-HLQMKK--IEADELPFEFMMNTLRLNNGVKADLYKQRTGLSLDDLNDVLTSLRARKL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E    +RL CT++G   L+SV+
Sbjct: 359 LVEDS--TRLACTEQGHIFLNSVL 380


>gi|238898975|ref|YP_002924657.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466735|gb|ACQ68509.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/335 (36%), Positives = 187/335 (55%), Gaps = 11/335 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C+KKCPYCDFNSH  + ++  E ++   L +++    LT  R+I +IF GG
Sbjct: 7   LSLYIHIPWCIKKCPYCDFNSHALKGELPHEEYVAHLLADLEADIPLTSGRAIETIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q +  +L G+     +  + EIT+EANP ++E   F  Y++AG+NRIS+G+Q
Sbjct: 67  GTPSLLSAQAMQQLLHGVKARIDIRKDAEITMEANPGAIEAKRFVDYQQAGINRISIGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q L  LGR H+A +   A HLA+ +     + DL+++LP QT+     +L++A+  
Sbjct: 127 SFDNQKLLALGRIHDAEQGKKAAHLAQTLSLSSFNLDLMHSLPDQTLEDALKDLEQAMIL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T F          LP E+ + D+           G   YEIS ++
Sbjct: 187 SPPHLSWYQLTIEPHTAFSSRPPP----LPDEDSSWDIVQKGHQCLQKAGYEQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
               +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++   +     V
Sbjct: 243 KKEHQCQHNLNYWRFGDYLGIGCGAHGKLTFDDGRMIRTVKTKHPRGFMQGQYQYQQYDV 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +       ++  EF M   RL E     D+  L G
Sbjct: 303 D-----LAERPFEFFMNRFRLLEPTPRADFLNLTG 332


>gi|260556243|ref|ZP_05828462.1| coproporphyrinogen III oxidase [Acinetobacter baumannii ATCC 19606]
 gi|260410298|gb|EEX03597.1| coproporphyrinogen III oxidase [Acinetobacter baumannii ATCC 19606]
          Length = 384

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 214/384 (55%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKTAVEHGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
              H  ++K  + +++   EF+M  LRL +G+  + +E   G  LD   +       R+ 
Sbjct: 302 AE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELYEQRTGLILDDLNDLLTSLRSREL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E     RL CT++G   L+SV+
Sbjct: 359 LVEDS--GRLACTEQGHIFLNSVL 380


>gi|304413276|ref|ZP_07394749.1| coproporphyrinogen III oxidase [Candidatus Regiella insecticola
           LSR1]
 gi|304284119|gb|EFL92512.1| coproporphyrinogen III oxidase [Candidatus Regiella insecticola
           LSR1]
          Length = 376

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/380 (34%), Positives = 212/380 (55%), Gaps = 22/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C++KCPYCDFNSH  +  +  + +++  L ++     L   R I+SIF GG
Sbjct: 7   MSLYIHIPWCIQKCPYCDFNSHALKGDIPHQKYVEHLLADLDADLPLIDGRKINSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + ++ +L+G+     ++ + EIT+EANP +VE   F+ Y++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSAEAMSQLLEGVNARLKLAEHAEITMEANPGAVEAERFRHYQQAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H + EA  A  LA  + F  ++ DL++ LP Q+  +   +L +A++ 
Sbjct: 127 SFSASKLKKLGRVHGSDEAKQAAILANLLQFRSVNLDLMHGLPDQSHREALDDLHQAIAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  H+S YQLTIE  T F          LP E+V   ++   Q I  + G   YE S ++
Sbjct: 187 APAHISWYQLTIEPNTAFSSRPH----TLPDEDVLWAIFQQGQQILQSAGYQQYETSAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLK---MVRKNGH 313
             G +  HNLNYWR+GDYIGIG GAH ++   +  +  +++ KHP  +++   + ++   
Sbjct: 243 KPGYQCQHNLNYWRFGDYIGIGCGAHGKITRSNGEILRTVKTKHPRGFMQGKYLDQQYNV 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIER 370
            V ++ F        EF M   RL E     D+  L G    ++    ++ L +   +E 
Sbjct: 303 VVADRPF--------EFFMNRFRLFEAAPRADFYHLTGLAESSIRSPLDQALAKGYLLET 354

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            Q  ++  T++G   L+S++
Sbjct: 355 KQHWQI--TEKGKLFLNSLL 372


>gi|78224718|ref|YP_386465.1| coproporphyrinogen III oxidase, anaerobic [Geobacter
           metallireducens GS-15]
 gi|78195973|gb|ABB33740.1| coproporphyrinogen III oxidase, anaerobic [Geobacter
           metallireducens GS-15]
          Length = 383

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 208/399 (52%), Gaps = 43/399 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
            ++  +Y+H PFCV+KC YC F S      +    +    L EM+     L  P   +++
Sbjct: 2   DDTTALYIHIPFCVRKCLYCAFAS-TDEAPLAIGEYTALLLREMELRAAALASPLRATTL 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+EP  +  I+DG A+ + +  + EIT+EANP +V  ++  GYR AGVNR+S
Sbjct: 61  YLGGGTPSLLEPDLVGNIIDGAARLFWLDPSAEITLEANPGTVTADSLAGYRGAGVNRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS +++ L  LGR H A EA  A  LAR   F  +  DLI+ LP Q++  W  +L+ 
Sbjct: 121 LGVQSFDDRMLERLGRVHTAREAKDAFALARRAGFDNIGIDLIHGLPDQSLDHWRDQLRM 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A +    H+S Y LT+E+GT F ++   G L LP E+ A  ++  T  + +A G   YEI
Sbjct: 181 AAALRPGHISAYGLTVEEGTPFARLEDQGVLALPDEDDAAAMFEETAEVLAAAGYEQYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-------------VGSHRVAISIEKH 300
           +N +  G  S HN  YWR  +Y+G G GAHS ++             +G++  +++    
Sbjct: 241 ANFALPGRRSRHNQVYWRRWNYLGFGAGAHSFLREPFPGIRWRNPDDLGTYGCSLADGVL 300

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------ 354
           PE+ + +             L+ E    E+L +GLR+ EGI    +    GR L      
Sbjct: 301 PETDIAL-------------LAEEDAMAEWLFLGLRMLEGIEEARFREEFGRPLMEIHGT 347

Query: 355 DIE--CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
            IE  C   L  +G        RLR T+RG+ + + V A
Sbjct: 348 AIEGFCAAGLLVRG------GGRLRLTRRGVILSNRVFA 380


>gi|302391388|ref|YP_003827208.1| oxygen-independent coproporphyrinogen III oxidase [Acetohalobium
           arabaticum DSM 5501]
 gi|302203465|gb|ADL12143.1| oxygen-independent coproporphyrinogen III oxidase [Acetohalobium
           arabaticum DSM 5501]
          Length = 378

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 215/378 (56%), Gaps = 10/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H+PFC++KC YCDFNS   +  +  E F  +   E++ +        + SIF GGG
Sbjct: 5   GLYIHFPFCIQKCYYCDFNSVAWQDDLAAE-FFTALCEEIKLVAADYDYPQLKSIFLGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS    Q IA +L  +   + + + +E+TIEANP +V+ N  + +++ G+NR+S GVQS
Sbjct: 64  TPSCFSGQTIAELLSVLEDEFRLKTELEVTIEANPGTVDQNKLEIFKEVGINRLSFGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR H A +A    +LAR + F  ++ DLI+A+P Q ++QW++ L+ AL  A
Sbjct: 124 FDNRILNKLGRIHTAQKAEKNYYLAREVGFANINLDLIFAIPGQKLSQWKVTLESALQLA 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HL+ Y L IE GT   K    G +    +++ +++Y LT+ +   +G   YEISN + 
Sbjct: 184 PEHLATYNLKIEPGTKLGKDLAQGRIEPVCQDLDLEMYQLTKKLLIDNGYEHYEISNFAK 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+ +GPGAH     G  R   ++E   E ++ +++     V  +
Sbjct: 244 PGYRSEHNQIYWQNEPYLALGPGAH--FYDGEFR-GNNLESIGE-YINVIKDGEKPVEIE 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSR 375
           E LS E +  E +++GLRL+EGIS  ++E   G    N+  E  + L +QG IE +   +
Sbjct: 300 ESLSREDKIIETMILGLRLKEGISTLEFEERFGESVHNIYNEELKKLNKQGLIE-INSQQ 358

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T++G  + + V+A  
Sbjct: 359 IALTEKGRVLANDVLAEF 376


>gi|85060010|ref|YP_455712.1| coproporphyrinogen III oxidase [Sodalis glossinidius str.
           'morsitans']
 gi|84780530|dbj|BAE75307.1| putative coproporphyrinogen III oxidase [Sodalis glossinidius str.
           'morsitans']
          Length = 376

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/378 (35%), Positives = 209/378 (55%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     LT  R+++++F G
Sbjct: 6   PLSLYLHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDHDLPLTSGRTVNTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+ +   ++S+ EIT+EANP +VE + F GY+ AG+NRIS+GV
Sbjct: 66  GGTPSLLSARAMQSLLDGVRQRLPLASDAEITMEANPGTVEADRFAGYQLAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H A EA  A  LA +   R  + DL++ LP Q++     +L  A++
Sbjct: 126 QSFAAEKLALLGRIHGAEEARRAARLAASPGLRSFNLDLMHGLPDQSLAGALDDLTEAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF          LP ++   D+Y    ++  A G   YE S +
Sbjct: 186 LAPPHLSWYQLTIEPNTLFGSRPP----ALPDDDALWDIYQRGDTLLKAAGYRQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      V  +++ +HP  +++     G+ +
Sbjct: 242 ARPGFQCRHNLNYWRFGDYLGIGCGAHGKLTQPDGTVLRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            ++  ++  +   E+ M   RL E     ++    G   D      ER L      E   
Sbjct: 297 AKRYPVAPAELPFEYFMNRFRLLEAAPRAEFTAFTGLTEDAGRPALERALAGDYITESA- 355

Query: 373 FSRLRCTQRGMTMLDSVI 390
            S  + T++G   L+S++
Sbjct: 356 -SHWQVTEKGKLFLNSLL 372


>gi|153209538|ref|ZP_01947434.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii 'MSU Goat Q177']
 gi|212218785|ref|YP_002305572.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuK_Q154]
 gi|120575331|gb|EAX31955.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii 'MSU Goat Q177']
 gi|212013047|gb|ACJ20427.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuK_Q154]
          Length = 375

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 187/327 (57%), Gaps = 8/327 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        +++ I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLIEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK H      LP+++  +++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYK-HPPA---LPTDDYILEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++   +     + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDAQKP---FIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
            ++ L+  +   EF+M  LRL++ I +
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPL 324


>gi|251788392|ref|YP_003003113.1| coproporphyrinogen III oxidase [Dickeya zeae Ech1591]
 gi|247537013|gb|ACT05634.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya zeae
           Ech1591]
          Length = 379

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLPLASGRPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++   EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPLAPEAEITMEANPGTVEADRFSGYQQAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A++
Sbjct: 126 QSFSPDKLTRLGRIHGPEEAKRAAALAAALGLRSFNLDLMHGLPEQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + S  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHRLLSDAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYQCRHNLNYWRFGDYLGIGCGAHGKLTFADGNIVRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++  +   ++  EF M   RL E     D+    G
Sbjct: 297 QQRSEVEKAERPFEFFMNRFRLLEPAPRADFTAYTG 332


>gi|312127398|ref|YP_003992272.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777417|gb|ADQ06903.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 376

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/376 (35%), Positives = 214/376 (56%), Gaps = 11/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++G+Y+H PFC +KC YCDF S+          +  +  +E+ + ++      I +I+ G
Sbjct: 3   NIGLYIHVPFCKRKCYYCDFVSYENVNDDVIFAYFSALESELIYYKE-NYEIEIDTIYIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS I  + I  +L+ I  N+ + SN EITIEANP S+     Q Y  AGVNR+S+G+
Sbjct: 62  GGTPSSISAKYILELLEFIYSNFKIKSNCEITIEANPESITQEKLQSYSLAGVNRLSVGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL +  LR +GR H++  A+  + +    F   S D+I  LP QT   +   L   L +
Sbjct: 122 QSLNDVELRAIGRVHDSEVALKILSVVPLYFVNFSVDVITGLPYQTFKSFMQTLNTLLEF 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  H+S+Y L IE+GT  ++ +++   +LPSE+    ++   + I S  GL+ YEISN +
Sbjct: 182 SPPHVSIYSLKIEEGTPLFERYEEYKSLLPSEDEERRMFWWARRILSEVGLYHYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YW   +YIG+G  AHS  +   +    +I ++     K +++NG AV  
Sbjct: 242 KKGFECKHNLKYWNVEEYIGVGCAAHSFFEGYRYYNTSNINEYA----KKIKENGLAVEG 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERVQF 373
           +EF+S+E+   EF+++GLR  EG S+ ++    G    R  + + E+ L++ G IE V  
Sbjct: 298 EEFISNEESEKEFIILGLRKIEGFSLDEFRERFGVEFERKYNSQIEK-LKKYGLIE-VNN 355

Query: 374 SRLRCTQRGMTMLDSV 389
           SRL+ T+RG+ + + V
Sbjct: 356 SRLKLTERGIDLANLV 371


>gi|262370614|ref|ZP_06063939.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314414|gb|EEY95456.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 384

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 214/380 (56%), Gaps = 18/380 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH V   K+    ++ ++ + + + +   +    R I S+
Sbjct: 11  LSLYIHMPWCVRKCPYCDFNSHAVPDGKLSLDLEQEYLHALVEDFKTQLEFAQGRHIHSV 70

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI  Q    +   +        + EIT+EANP +VE + F  Y   G+NR+S
Sbjct: 71  FIGGGTPSLISAQGYQWLFAQLKALLPFEVDCEITLEANPGTVEHDPFADYLAVGINRLS 130

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L  LGR H+ ++AI+AI LAR+  F R++ DL++ LP+QT+ Q  ++L+ 
Sbjct: 131 IGVQSFNTEHLTKLGRIHSNTDAISAIDLARDAGFKRINVDLMHGLPEQTLEQALLDLKL 190

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+     H+S YQLTIE  T+F++       VLP ++V  ++    ++   A G   YE+
Sbjct: 191 AVDNGATHISWYQLTIEPNTVFFRTKP----VLPVDDVLEEIQAQGEAYLKAQGFINYEV 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S        S HNLNYW++GDY+ IG GAH++V            + P+ +L  V     
Sbjct: 247 SAWR-KEQPSAHNLNYWQFGDYLAIGAGAHAKVTQPDGVYRFQKTRLPKDYLAKVPAEH- 304

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ-RQGFIER 370
             V+ + + +++   EF+M  LRL +G++ + +    G NLD   E   +L+ R+  ++ 
Sbjct: 305 --VQFKRIEADELPFEFMMNALRLNDGVAAEYYAQRTGLNLDSLAETLDSLRSRKLMVDD 362

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
               RL CT++G   L+SV+
Sbjct: 363 AM--RLACTEQGHVFLNSVL 380


>gi|238787376|ref|ZP_04631175.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia frederiksenii ATCC 33641]
 gi|238724638|gb|EEQ16279.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 204/367 (55%), Gaps = 16/367 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + 
Sbjct: 1   MQKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVSLVDGREISTIFIGGGTPSLLSAEA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +LDG+     V+ + EIT+EANP +VE + F GY++AG+NRIS+GVQS   + L  L
Sbjct: 61  MQQLLDGVRARLPVALDAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAEKLTRL 120

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++    HLS YQL
Sbjct: 121 GRIHGPEEAKRAAELATSLNLRSFNLDLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  T F          LP ++   D++     + SA G   YE S ++  G +  HNL
Sbjct: 181 TIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           NYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  + +  +
Sbjct: 237 NYWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVETADR 291

Query: 327 ADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
             EF M   RL E     D+    G     +  + +  L ++  IE  Q+ ++  T++G 
Sbjct: 292 PFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEQYWQI--TEKGK 349

Query: 384 TMLDSVI 390
             L+S++
Sbjct: 350 LFLNSLL 356


>gi|238763266|ref|ZP_04624231.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia kristensenii ATCC 33638]
 gi|238698539|gb|EEP91291.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 203/367 (55%), Gaps = 16/367 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + 
Sbjct: 1   MQKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVPLVSGREISTIFIGGGTPSLLSAEA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +LDG+     ++ N EIT+EANP +VE + F GY++AG+NRIS+GVQS     L  L
Sbjct: 61  MQQLLDGVRARLPLAMNAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAAKLTRL 120

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++    HLS YQL
Sbjct: 121 GRIHGPEEAKRAAELATSLQLRSFNLDLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  T F          LP ++   D++     + SA G   YE S ++  G +  HNL
Sbjct: 181 TIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           NYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  + +  +
Sbjct: 237 NYWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVEAADR 291

Query: 327 ADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
             EF M   RL E     D+    G     +  + +  L +Q  IE  ++ ++  T++G 
Sbjct: 292 PFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKQYLIETEEYWQI--TEKGK 349

Query: 384 TMLDSVI 390
             L+S++
Sbjct: 350 LFLNSLL 356


>gi|253702167|ref|YP_003023356.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M21]
 gi|251777017|gb|ACT19598.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M21]
          Length = 381

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/380 (35%), Positives = 216/380 (56%), Gaps = 9/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFG 77
           G+Y+H+PFC+KKC YCDFNS           +++  L EM+ +RQ   P  +   +++ G
Sbjct: 4   GLYLHFPFCLKKCLYCDFNS-TPAGGSDHRGYVELLLKEME-LRQAALPEPVIAPTLYLG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ + LI+D   K++++  + E+T+EANP ++     QGYR AGVNR+SLG+
Sbjct: 62  GGTPSLMAPELVGLIVDAARKSFSLEPDAEVTLEANPGTLTPERLQGYRSAGVNRLSLGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS E++ L+ LGR H+ +EA++A   AR   F  +S DL+++LP Q+++QW   L+ A+S
Sbjct: 122 QSFEDRLLKRLGRVHSCAEALSAYQDARRAGFDNISIDLMHSLPGQSLSQWREALELAVS 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A +H+S Y L+IE+GT F ++H  G+L LP E  A  ++  T ++ S  G   YEISN+
Sbjct: 182 LAPEHVSAYALSIEEGTPFERLHDVGELPLPGEEEAAAMFEATAAVLSKAGYRHYEISNY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW    Y+G G GAHS                  ++   +R    A  
Sbjct: 242 AKPGRHSRHNSAYWSRLSYLGFGAGAHSFWNPDGLGRRWKNPGEAAAYAAGIRVGIPADE 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLAGRNLDIECER--NLQRQGFIERVQF 373
           E E L+ E    E   +GLR+ +G+ +   +E      L    ++   L+++G + R + 
Sbjct: 302 EPEQLTLEDALSECFFLGLRVLDGLDLAPLFERYGESALAPHLKQVAALEKKGALTR-EG 360

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           SR+R +   + + + + ++ 
Sbjct: 361 SRIRISPDAVILANGIFSSF 380


>gi|328876620|gb|EGG24983.1| hypothetical protein DFA_03229 [Dictyostelium fasciculatum]
          Length = 545

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 210/397 (52%), Gaps = 51/397 (12%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-------- 65
           Q  + + +Y+HWP+C K C YC FN ++    V      QS +TE+  + +L        
Sbjct: 153 QREHPISIYIHWPYCSKICGYCSFNKYLDGPHVDHSRMKQSMVTELSNLIKLYYPSSPSS 212

Query: 66  ---TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
              +    + SI+FGGGTPSL     ++ I++ + + +        T   N   +E+N  
Sbjct: 213 SSSSIQYKLKSIYFGGGTPSLATIDTLSSIVETVYQYFP-------TTTTNRKDLEINL- 264

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
                     +SLGVQ+L ++ L+FLGR HN  +AI +I    +IF  +SFD+IYA   Q
Sbjct: 265 ---------ELSLGVQALNDEDLKFLGRTHNTKQAIESIETCNSIFDHVSFDMIYARRGQ 315

Query: 183 -TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNL 238
            ++ QW  EL++A+  +  HLSLY LT E GT F+K    H+   ++ P+ +     Y  
Sbjct: 316 HSVEQWRQELKQAVQLSKGHLSLYNLTFEDGTAFFKRLRKHRSNHIIKPTNDQCSLHYMA 375

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------R 292
               T   G++ YEISN S  G  S HNLNYWR GDYIGIGPGA SRV + ++      +
Sbjct: 376 AIEETEKVGMNQYEISNFSIPGHHSQHNLNYWRGGDYIGIGPGACSRVSIFNNQQDKPEK 435

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSE--QQADEFLMMGLRLREGISVKDWEMLA 350
           VA+    HP++W+  V  NGH + E E  + E   + +E L+MGLR +EG+S   +  L+
Sbjct: 436 VALKTIIHPKTWMDRVDANGHGLFEDETTTLEFKDRINELLLMGLRTKEGVSRSTFRYLS 495

Query: 351 GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLD 387
              LDIE          ++ +  SRL+    GM +LD
Sbjct: 496 -HGLDIE--------QVLDPIVLSRLQSI--GMIVLD 521


>gi|239500871|ref|ZP_04660181.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii AB900]
 gi|322506615|gb|ADX02069.1| coproporphyrinogen III oxidase [Acinetobacter baumannii 1656-2]
          Length = 384

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 214/384 (55%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+     H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKTAVEQGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
              H  ++K  + +++   EF+M  LRL +G+  + +E   G +LD   +       R+ 
Sbjct: 302 AE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTSLRSREL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E     RL CT++G   L+SV+
Sbjct: 359 LVEDS--DRLACTEQGHIFLNSVL 380


>gi|114330337|ref|YP_746559.1| coproporphyrinogen III oxidase [Nitrosomonas eutropha C91]
 gi|114307351|gb|ABI58594.1| coproporphyrinogen III oxidase, anaerobic [Nitrosomonas eutropha
           C91]
          Length = 411

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/333 (36%), Positives = 186/333 (55%), Gaps = 16/333 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIF 75
           LG+Y+H P+CV+KCPYCDFNSH       + +  ++ +   +++  + Q+ G R ++S+F
Sbjct: 24  LGLYIHLPWCVRKCPYCDFNSHAIDPNSALPEAEYVAALKRDLELSLPQIWG-RPVTSVF 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL    +I  IL       + +   EIT+EANP ++E   F  +R AG+NR+S+
Sbjct: 83  LGGGTPSLFSGASIDAILSYARMLLSFAPETEITLEANPGTLEAQKFADFRSAGINRLSI 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS     L+ LGR HN +EA  A+  A   F  ++ DL+YALP QT  +   +++ A 
Sbjct: 143 GIQSFNPGHLQALGRIHNDAEASRAVEQALQHFSNINLDLMYALPNQTQDEALQDIEAAC 202

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            + V H+S Y LT+E  TLFY+        LP E+ + D+  + + + +  G   YE S 
Sbjct: 203 GWGVPHISAYHLTLEPNTLFYRQPPK----LPDEDTSADMQIMIERVLAEKGYQHYETSA 258

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G   +HN+NYW+YGDY+GIG GAHS++      +     KHP  +L+        +
Sbjct: 259 FAQPGRMCVHNMNYWQYGDYLGIGAGAHSKISFREKIIRQMRHKHPRHYLEQAAARNTNL 318

Query: 316 VEKEFLSSEQQAD------EFLMMGLRLREGIS 342
             +  L++EQ+        EF+M  LRL +G  
Sbjct: 319 --ENMLATEQEVGPQDRIFEFMMNALRLTDGFD 349


>gi|77165903|ref|YP_344428.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrosococcus oceani ATCC 19707]
 gi|254433846|ref|ZP_05047354.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrosococcus oceani AFC27]
 gi|76884217|gb|ABA58898.1| coproporphyrinogen III oxidase, anaerobic [Nitrosococcus oceani
           ATCC 19707]
 gi|207090179|gb|EDZ67450.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrosococcus oceani AFC27]
          Length = 385

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 204/373 (54%), Gaps = 15/373 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CV+KCPYCDFNSH    K  +  +I + + +++        R I SIF GG
Sbjct: 10  LALYIHFPWCVRKCPYCDFNSHSLPEKFPETAYIDALVRDLEQDLPRVWGRRIHSIFMGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +++  +L  I      S  +EIT+EANP +VE   F  +   G+NR+SLGVQ
Sbjct: 70  GTPSLFSAESLDRLLSAIRARLPWSPQIEITLEANPGTVEQGRFTEFHHIGINRLSLGVQ 129

Query: 139 SLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S  +++L+ LGR H++ E   AIAA H A   F  ++ DL++ LP QT TQ   ++  A+
Sbjct: 130 SFNDEALKHLGRIHSSQESCQAIAAAHTAG--FNNINLDLMFGLPGQTETQALADVAMAI 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A  H+S YQLT+E  T FY+        LP E          Q   +  G H YE+S 
Sbjct: 188 SLAPHHISYYQLTLEPNTYFYRYPPS----LPHEEAINSWQTDCQVRLAQAGYHRYEVSA 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMVRKNGH 313
            +    +  HNLNYWR+GDY+GIG GAH ++   + +H   I   KHP S+L        
Sbjct: 244 FAKSDRQCQHNLNYWRFGDYLGIGAGAHGKISDAMENHITRIWKIKHPTSYLAKA-GTPE 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ- 372
            +  +   S ++ A EF++  LRL  GI  + ++   G  + +  E+ L +   ++ ++ 
Sbjct: 303 GIGGETNPSPQEAAFEFMLNALRLNGGIPSRLFQERVGLPISV-VEKTLHQAEALKLIEW 361

Query: 373 -FSRLRCTQRGMT 384
            F  +R T++G +
Sbjct: 362 DFRHIRPTEKGFS 374


>gi|303251293|ref|ZP_07337471.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252474|ref|ZP_07534370.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307256900|ref|ZP_07538678.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|302649835|gb|EFL80013.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860066|gb|EFM92083.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306864634|gb|EFM96539.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
          Length = 385

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 22/349 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSIS 72
           L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++   + LT        R I 
Sbjct: 8   LSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLS--QDLTAYQTAIRDRKIH 65

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV R
Sbjct: 66  SIFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWE 188
           IS+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q  
Sbjct: 126 ISMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQAL 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G 
Sbjct: 186 DDLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGY 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             YE S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++ 
Sbjct: 242 EQYETSAYAKKSYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR- 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               G     ++ +    +  EF M   RL E    +++E   G + +I
Sbjct: 301 ----GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTGLDREI 345


>gi|193076228|gb|ABO10856.2| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter baumannii ATCC 17978]
          Length = 384

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 215/384 (55%), Gaps = 18/384 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRS 70
            S  L +Y+H P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RS
Sbjct: 7   ASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRS 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPSLI  +    + + +        + EIT+EANP ++E + F GY +AG+
Sbjct: 67  IHSVFIGGGTPSLISAKGYVWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGI 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   
Sbjct: 127 NRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARRAGFKRVNVDLMHGLPEQTLEQALY 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G  
Sbjct: 187 DLKTAVEHGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFI 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S        S+HNLNYW++GDY+ IG GAH +V            + P+ +L  V 
Sbjct: 243 NYEVSAWR-KEQPSVHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVP 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
              H  ++K  + +++   EF+M  LRL +G+  + +E   G +LD   +       R+ 
Sbjct: 302 AE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTSLRSREL 358

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E     RL CT++G   L+SV+
Sbjct: 359 LVE--DSGRLACTEQGHIFLNSVL 380


>gi|54295196|ref|YP_127611.1| hypothetical protein lpl2276 [Legionella pneumophila str. Lens]
 gi|53755028|emb|CAH16516.1| hypothetical protein lpl2276 [Legionella pneumophila str. Lens]
          Length = 375

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/334 (35%), Positives = 192/334 (57%), Gaps = 8/334 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + +  +IQ+ + +++        R I+SIF GG
Sbjct: 4   LSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    + + + +    + N+EIT+EANP +VE + F  YR++G+NR+SLG+Q
Sbjct: 64  GTPSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALSY
Sbjct: 124 SFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSITQGLEDLKTALSY 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLTIE  T+FYK        LPSE     L     ++    G H YEIS  S
Sbjct: 184 QPEHLSWYQLTIEPNTVFYKHTPP----LPSEEEDYLLEEQGFALLYNSGYHRYEISAFS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L   +     +  
Sbjct: 240 KPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKP---YLAA 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +E ++ ++   EF++   RL + I ++ +    G
Sbjct: 297 RETITGKELLFEFMLNTTRLEQSIPLELFTTATG 330


>gi|262377346|ref|ZP_06070570.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262307799|gb|EEY88938.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 384

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/381 (35%), Positives = 205/381 (53%), Gaps = 20/381 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSIS 72
           L +Y+H P+CV+KCPYCDFNSH      GQ      + ++++ + + +        R I 
Sbjct: 11  LSLYIHMPWCVRKCPYCDFNSHA--VPDGQLSLELEQEYLRALVEDFKTQVDFAQGRQIH 68

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSLI       + D +      +   EIT+EANP +VE + F GY +AG+NR
Sbjct: 69  SVFIGGGTPSLISAPGYQWLFDQLKAVIPFAEGCEITLEANPGTVEHDPFAGYLQAGINR 128

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS   + L+ LGR H+  +AI+AI LAR   F R++ DL++ LP+QT+ Q   +L
Sbjct: 129 LSIGVQSFNTEHLKRLGRIHSNEDAISAIGLAREAGFQRINVDLMHGLPEQTLDQALHDL 188

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+     H+S YQLTIE  T+F++       +LP + V  D+    +    A G   Y
Sbjct: 189 KLAVEQGATHISWYQLTIEPNTVFFRTQP----ILPVDEVLEDIQEQGELYLKAQGFINY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V   
Sbjct: 245 EVSAWR-KELPSAHNLNYWQFGDYLAIGAGAHGKVTQPDGVYRFQKTRLPKDYLAKVPAE 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
               V+ + +       EF+M  LRL +G+  K +    G +LD   E   +L+ +  + 
Sbjct: 304 H---VQFKRIEDTDLPFEFMMNALRLNQGVEAKLYAERTGLSLDTLDELLSSLRDRKLMV 360

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
             Q  RL CT++G   L+SV+
Sbjct: 361 DDQ-DRLSCTEQGHIFLNSVL 380


>gi|218778961|ref|YP_002430279.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760345|gb|ACL02811.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfatibacillum alkenivorans AK-01]
          Length = 377

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/381 (37%), Positives = 206/381 (54%), Gaps = 16/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC KKC YCDF S      +    +I++   EMQ      GP    ++FFGGG
Sbjct: 3   GLYIHVPFCRKKCRYCDFYSVTDDSAI--PAYIKALKREMQIREWDAGP--FDTVFFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++ P  +A IL+  +  + ++ + E+T+EANP +V  N+ + +++AGVNRISLGVQS
Sbjct: 59  TPSVLPPGRVAEILERASLIFGIAPDAEVTLEANPGTVSQNDLEAFQQAGVNRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++Q+L+FLGR H+A EA  A+  A    F  +  DLIY +P QT   W  +L+  L+Y 
Sbjct: 119 LDDQTLQFLGRIHSAFEARLALDWAMEAGFDSVGCDLIYGVPGQTRESWTKDLEDVLAYG 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y LTIE+ T   +  + G+     E    +L+  T     + G   YEISN + 
Sbjct: 179 PDHLSCYILTIEESTPLGRALERGEFSPMDEGRVGELFLHTSDFLESKGFLHYEISNFA- 237

Query: 259 LGAESL--HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
            G E    HNL+YW +  Y+G+GP AHS +++G       +    E +L MV      + 
Sbjct: 238 RGREKACRHNLHYWNHAPYLGLGPAAHSFLEIGRQWNVSDL----EIYLAMVNAGRMPME 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECE--RNLQRQGFIERVQF 373
           E E L+ EQ   E+L  GLR  +GI   ++        LDI     + LQ +G + R   
Sbjct: 294 ESEILTEEQHMLEWLYTGLRQAKGIDAGEFLRRFDKAFLDIFGPDWKRLQDEG-LARESS 352

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
                T++GM   D V   LA
Sbjct: 353 QSFALTKKGMLFSDGVCQLLA 373


>gi|269468050|gb|EEZ79768.1| coproporphyrinogen III oxidase [uncultured SUP05 cluster bacterium]
          Length = 368

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 135/381 (35%), Positives = 212/381 (55%), Gaps = 30/381 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H+P+CVKKCPYCDFNSH    + G   +I++ L ++    +    RSI SIF GG
Sbjct: 7   LSLYIHYPWCVKKCPYCDFNSHEGEDRNG---YIEALLKDLDKDLKYVQGRSIHSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +  G+    T   N+EIT+E NP + EV+ F+ ++  G+NR+S+GVQ
Sbjct: 64  GTPSLMSADELHELFTGLKSKLTFEKNIEITLETNPGTFEVDKFKAFKDIGINRLSIGVQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L  LGR H+A +A  A   A  IF   + DL+Y L  Q++     +L +A+  +
Sbjct: 124 SFQDRHLNALGRIHSAEDASKACTYASQIFNNFNIDLMYGLEGQSIDDCLSDLNQAIDLS 183

Query: 199 VDHLSLYQLTIEKGTLFYK----MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             H+S YQLTIE  TLF K    + KD D+    E   VDL  L Q      G   YE+S
Sbjct: 184 PQHVSFYQLTIEPNTLFAKFPPTLPKDDDIWRMGEQ-GVDL--LEQC-----GFERYEVS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNG 312
             +F    S HNLNYWR+GDYIGIG GAH ++ +  + +V  +++ K P+ +++   K  
Sbjct: 236 --AFGKIPSKHNLNYWRFGDYIGIGAGAHGKITESKTGKVVRTLKSKSPKEYIQNRNKTL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIER 370
             +    F        EF++  LRL+ G  V  ++   G+++++  E  +  +  G +  
Sbjct: 294 EVIDNLSF--------EFMLNALRLKNGFDVDLFKARTGKDINVINEQLKRAESMGLVNL 345

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
            +  R+  T++G   L+ +I+
Sbjct: 346 TK-DRITPTKKGFDFLNDLIS 365


>gi|310766476|gb|ADP11426.1| coproporphyrinogen III oxidase [Erwinia sp. Ejp617]
          Length = 378

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 132/378 (34%), Positives = 210/378 (55%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  E ++Q  L ++     LT  R + +IF G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHEEYVQHLLNDLNIDLPLTSGREVGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     +S + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLSPDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAALGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPPR----LPDEDDLWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++ +     +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGTIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
            ++  ++  ++  EF M   RL E     ++    G    ++  + +  L +    E  +
Sbjct: 297 DKRVEVADAEKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSIRAQIDTALAKGYLTETAE 356

Query: 373 FSRLRCTQRGMTMLDSVI 390
               + T++G   L+S++
Sbjct: 357 --HWQVTEKGKLFLNSLL 372


>gi|154502610|ref|ZP_02039670.1| hypothetical protein RUMGNA_00423 [Ruminococcus gnavus ATCC 29149]
 gi|153796802|gb|EDN79222.1| hypothetical protein RUMGNA_00423 [Ruminococcus gnavus ATCC 29149]
          Length = 385

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 206/385 (53%), Gaps = 16/385 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFCV+KC YCDF S        +  ++ +   E+Q  R++     +SS+F GG
Sbjct: 5   LELYIHIPFCVQKCAYCDFLSAPAN-DAAKAEYVDALKKEIQRYREVASSYQVSSVFVGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + +  I   + + +T+  + EITIEANP +V     +G+++AG+NRIS G+Q
Sbjct: 64  GTPSILSCEQMGEIFKMLRQVFTIDRDAEITIEANPGTVTEEKLEGWKQAGINRISFGLQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+  + L+ LGR H   E   +  +AR   F  ++ DLI A+P QT+  WE  L+     
Sbjct: 124 SVNNEELKMLGRIHTYEEFRESYDMARQAGFDNINIDLISAIPGQTVKSWEHTLRTVAEL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDL------VLPSENVAVDLYNLTQSITSAHGLHAY 251
             +H+S Y L IE+GT FY+ +  G         LP E+    +Y  T+ I   +G H Y
Sbjct: 184 HPEHISAYSLIIEEGTRFYQWYGKGQTDQEKYPPLPDEDAERQMYERTEGILEEYGFHRY 243

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G E  HNL YW   +Y+GIG GA S +    + +   +     S+++ +   
Sbjct: 244 EISNYAREGKECRHNLGYWSRVEYLGIGLGASSFISNTRYHLCTDM----ISYIERIGSG 299

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
                E E L+ E   +EF+ +GLR  +GIS   +E   G  ++    +    L+++  +
Sbjct: 300 EDLREEIEVLTKEDAMEEFMFLGLRRMQGISGTQFENCFGNTIEEIYGDVIEKLEQEKML 359

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
           E V+  ++R T+RG+ + + V    
Sbjct: 360 E-VKEDKIRLTKRGIDVSNYVFCEF 383


>gi|188534962|ref|YP_001908759.1| coproporphyrinogen III oxidase [Erwinia tasmaniensis Et1/99]
 gi|188030004|emb|CAO97888.1| Putative oxygen-independent coproporphyrinogen III oxidase [Erwinia
           tasmaniensis Et1/99]
          Length = 378

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 212/378 (56%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  E ++Q  L ++     LT  R + ++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHEEYVQHLLNDLDTDLPLTSGREVGTVFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     +S + EIT+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSGEAMQMLLDGVRARLPLSPDAEITMEANPGAVEADRFSSYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPPR----LPDEDDLWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++ +     +  S  +HP  ++     +G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGTIIRTSKTRHPRGFM-----SGNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
            ++  ++  ++  EF M   RL E     ++    G    ++  + +  L +    E  +
Sbjct: 297 DKRCEVADAEKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSVRAQIDTALAKGYLTETAE 356

Query: 373 FSRLRCTQRGMTMLDSVI 390
           + ++  T++G   L+S++
Sbjct: 357 YWQV--TEKGKLFLNSLL 372


>gi|138896080|ref|YP_001126533.1| coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248974|ref|ZP_03147674.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           G11MC16]
 gi|134267593|gb|ABO67788.1| Coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211850|gb|EDY06609.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           G11MC16]
          Length = 379

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/378 (35%), Positives = 204/378 (53%), Gaps = 16/378 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y H PFC   C YCDFN   + +  GQ  ++++Q+   EM+W     G + + ++F GG
Sbjct: 5   AYFHIPFCAHICHYCDFN---KVFAAGQPIDDYLQAMDKEMEWTAAEFGSQ-LKTLFIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+++EP  +  +L+ I K++       E T+EANP  +        R AGVNR+S+GV
Sbjct: 61  GTPTVLEPVQLGRLLESIHKHFQFHPQTAEFTVEANPDGLTKEKLAILRDAGVNRLSIGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +++ L+ +GR H   +A  A+ +AR   F  +S DL+Y LP QT+ Q+  +L+ A S
Sbjct: 121 QAFDDELLQAIGRTHRRGDAERAVAMAREAGFENISLDLMYGLPGQTLEQFLADLETAFS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V HLS Y L IE  T+FY   ++G L LP E     +Y      T AHG   YEISN+
Sbjct: 181 LHVPHLSAYSLIIEPKTIFYNEWRNGRLRLPGEEAEAVMYEAAMERTVAHGYQQYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +F G ES HNL YW   +Y GIG GAHS +  G  R  I   +H   +++ V +      
Sbjct: 241 AFPGFESQHNLVYWNNEEYYGIGAGAHSYID-GVRRANIGPIRH---YIEKVERGEWPHR 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQF 373
           +   L+  +Q +E + +GLR  EG+S   +    GR +       ++R+   G +E    
Sbjct: 297 DVHRLTFREQMEEEMFLGLRKTEGVSKARFRQKFGREMSDMFGEAIRREIENGRLEETA- 355

Query: 374 SRLRCTQRGMTMLDSVIA 391
           + +R T+RG  + + V A
Sbjct: 356 THVRLTKRGKLLGNEVFA 373


>gi|74316497|ref|YP_314237.1| coproporphyrinogen III oxidase [Thiobacillus denitrificans ATCC
           25259]
 gi|74055992|gb|AAZ96432.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thiobacillus denitrificans ATCC 25259]
          Length = 392

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 202/375 (53%), Gaps = 8/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CVKKCPYCDFNSH     + +  ++ +   +++        R I ++FFG
Sbjct: 18  PLSLYIHLPWCVKKCPYCDFNSHAAE-GIPEAAYVDALRADLEHALPDIWGRKIHTVFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + I  IL  +     +    EIT+EANP ++E   F G+R+AG+ R+SLG+
Sbjct: 77  GGTPSLFSAEGIDRILATVRTLTPLVPGAEITLEANPGTIEAAKFAGFREAGITRVSLGI 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS + + L+ LGR H+ +EA  A  LA   F   + DL+YALP QT+ +   ++  AL++
Sbjct: 137 QSFDPRHLKALGRIHDGTEARRAAELAATHFDTFNLDLMYALPGQTLAEALADVDAALAF 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y LT+E  T F          LP +++A D+     +     G+  YE S ++
Sbjct: 197 QPPHLSAYHLTLEPNTPFGHAAPPN---LPDDDLAADMQLAIGARLIDAGMQHYETSAYA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNLNYW++GDY+GIG GAHS++      V     KHP+ ++  V    H V +
Sbjct: 254 KPGHAGRHNLNYWQFGDYLGIGAGAHSKLSFHDRIVRQMRTKHPQQYMTAVHGGAH-VAD 312

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
              L+      EF+M  LRL EG+  + +E+  G  L++        + +G +  V+  R
Sbjct: 313 TRALTRNDLPFEFMMNALRLTEGVPAELFELRTGLPLNVCAAALAQARAKGLLG-VELGR 371

Query: 376 LRCTQRGMTMLDSVI 390
           L  T +G   L+ ++
Sbjct: 372 LEPTLQGQRFLNDLL 386


>gi|320352526|ref|YP_004193865.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobulbus
           propionicus DSM 2032]
 gi|320121028|gb|ADW16574.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobulbus
           propionicus DSM 2032]
          Length = 383

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/386 (36%), Positives = 206/386 (53%), Gaps = 23/386 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSI-----SS 73
           G+Y+H PFC +KCPYC F S      V Q   I+ ++  ++  MRQL     I     ++
Sbjct: 8   GIYLHVPFCRRKCPYCSFFS-----IVPQAGDIRRYVETVRLQMRQLAAVPEIQALRFAT 62

Query: 74  IFFGGGTPSLIEPQNIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +FFGGGTPSL+ P+ +A +L D  A     +   EITIE NP +++    +   +AG NR
Sbjct: 63  VFFGGGTPSLLPPEALATLLADCRAVFPFATEQPEITIEVNPGTIDPTGLRQLNRAGCNR 122

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QSL+++ L  LGR H A EA+A +  AR   F   S DL+Y LP QT+  W+  L
Sbjct: 123 LSIGIQSLDDRELHQLGRIHTADEALAILAAAREAGFENCSADLMYGLPGQTVNSWQRGL 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +R L+  +DH SLY+LT+E+ T F +        LP E+  + +          HGLH Y
Sbjct: 183 ERILAAGIDHCSLYELTVEEHTPFARQLAQRQWTLPPEDEVLAMMTAIDRTVGRHGLHRY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G E  HN NYW+ G Y+G+GPGA +    G  R A++       W+      
Sbjct: 243 EISNYALPGLECAHNRNYWQNGWYLGLGPGAVAAFG-GQRRTAVADLAAYCHWI----AT 297

Query: 312 GHAVVE-KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGF 367
           G  V +  E L +E    E ++MGLRL  G+S+         +L       L R   QG 
Sbjct: 298 GQTVWQTTERLDAEAAFRETVIMGLRLLAGVSISALAQRFAIHLPTYYGPTLSRLLDQGL 357

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           +  ++  RLR +  G+ + + V+A L
Sbjct: 358 VI-LEHDRLRLSPTGLPLANRVMAEL 382


>gi|260913236|ref|ZP_05919718.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632823|gb|EEX50992.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 384

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 204/355 (57%), Gaps = 22/355 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----RQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ +IQ  L ++Q      +     R++ S
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHAQKGQIPEQEYIQHLLQDLQQDLQHYKHSVQDRTLYS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L G+ +     S++EIT+EANP + E   F+GY KAGV RI
Sbjct: 68  IFIGGGTPSLFSAEGIQQLLSGVEQLIPFKSDIEITLEANPGTAEAERFKGYVKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA EA +A++ A+ +     + DL++ LP QT+T+   +L+
Sbjct: 128 SMGIQSFNDDKLKRLGRIHNAQEAKSAVNFAKVSGLKSFNLDLMHGLPNQTLTEALDDLK 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +A+     HLS YQLTIE  T+F Y+       VLP ++   D++     + +  G   Y
Sbjct: 188 QAIKLDPPHLSWYQLTIEPNTMFAYR-----PPVLPDDDELWDIFEQGHQLLTDAGYVQY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRK 310
           E S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++    
Sbjct: 243 ETSAYAKPDFQCQHNLNYWRFGDYLAIGCGAHGKMSFENGDILRYSKTKHPKGYMR---- 298

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
            G  + E++ + +E +  EF M   RL E +   ++    G       E+N++ Q
Sbjct: 299 -GEYLYEEKHVVAEDRPFEFFMNRFRLLEAVPKAEFIQFTGLR-----EKNIREQ 347


>gi|170725687|ref|YP_001759713.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
 gi|169811034|gb|ACA85618.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
          Length = 378

 Score =  225 bits (574), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 212/382 (55%), Gaps = 16/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + ++++    Q    R + SIF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQNGELPQQEYVDALISDLAHDLQYVQGRKLHSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL     I  +L  +++      ++EIT+EANP ++E ++F+ Y +AGV R+S+GVQ
Sbjct: 67  GTPSLFHASQIEKLLTHVSQVIPFQDDIEITMEANPGTLEHDDFEAYYQAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H+  EA  A   A +  +   + DL++ LP Q+  +   ++  A + 
Sbjct: 127 SFSSDKLNLLGRIHDEDEAKVAAQKALSAGYKSFNLDLMHGLPNQSFAEAMADIDTAAAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE+ TLF+         LP +    ++Y   Q   +A G   YEIS ++
Sbjct: 187 SPPHLSWYQLTIEQNTLFHSRPPQ----LPDDEALWEIYEQGQKKLAALGYQQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HN+NYW++GDY+GIG GAH ++ +   +++  +++ KHP+ +L     N    
Sbjct: 243 KPGFQCRHNINYWQFGDYLGIGCGAHGKITILNENKIIRTVKIKHPKGYLATDSYN---- 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E   ++ E +A E+LM   RL   I  +++E   G + ++     +R  ++Q   E  +
Sbjct: 299 FETTEVAKEDRALEYLMNRFRLMSPIPKREFEQRTGLSREVLTSGIQRAKEKQLLTENDE 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
           +  L  T RG   ++ +++   
Sbjct: 359 YWEL--TSRGKLFVNELLSQFC 378


>gi|29653935|ref|NP_819627.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 493]
 gi|154707407|ref|YP_001424813.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii Dugway 5J108-111]
 gi|165923927|ref|ZP_02219759.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 334]
 gi|29541198|gb|AAO90141.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii RSA 493]
 gi|154356693|gb|ABS78155.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii Dugway 5J108-111]
 gi|165916619|gb|EDR35223.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 334]
          Length = 375

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 185/327 (56%), Gaps = 8/327 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        + + I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLFEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK H      LP+++   ++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYK-HPPA---LPTDDYIWEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++   +     + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDAQKP---FIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
            ++ L+  +   EF+M  LRL++ I +
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPL 324


>gi|52842564|ref|YP_096363.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629675|gb|AAU28416.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 375

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 190/334 (56%), Gaps = 8/334 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + +  +IQ+ + +++        R I+SIF GG
Sbjct: 4   LSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    + + + +    + N+EIT+EANP +VE + F  YR++G+NR+SLG+Q
Sbjct: 64  GTPSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALSY
Sbjct: 124 SFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTALSY 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLTIE  T+FYK        LPSE     L     ++    G H YEIS  S
Sbjct: 184 QPEHLSWYQLTIEPNTVFYKHTPP----LPSEEEDYLLEEQGFALLHNSGYHRYEISAFS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L   +    A   
Sbjct: 240 KPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKPYLAAC-- 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            E ++ ++   EF++   RL + I +  +    G
Sbjct: 298 -ETITGKELLFEFMLNTTRLEQSIPLDLFTTTTG 330


>gi|161830378|ref|YP_001596523.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 331]
 gi|161762245|gb|ABX77887.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 331]
          Length = 375

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 185/327 (56%), Gaps = 8/327 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        + + I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLFEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK H      LP+++   ++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYK-HPPA---LPTDDYIWEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++   +     + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDAQKP---FIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
            ++ L+  +   EF+M  LRL++ I +
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPL 324


>gi|212212915|ref|YP_002303851.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuG_Q212]
 gi|212011325|gb|ACJ18706.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuG_Q212]
          Length = 375

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 185/327 (56%), Gaps = 8/327 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        + + I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLFEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK H      LP+++   ++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYK-HPPA---LPTDDYIWEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++   +     + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDAQKP---FIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
            ++ L+  +   EF+M  LRL++ I +
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPL 324


>gi|82701203|ref|YP_410769.1| coproporphyrinogen III oxidase [Nitrosospira multiformis ATCC
           25196]
 gi|82409268|gb|ABB73377.1| coproporphyrinogen III oxidase, anaerobic [Nitrosospira multiformis
           ATCC 25196]
          Length = 408

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 211/382 (55%), Gaps = 17/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQW-MRQLTGPRSISSI 74
           L +Y+H P+C+KKCPYCDFNS+  R + G   +  ++ + + +++  + Q+ G R + SI
Sbjct: 24  LSLYIHIPWCMKKCPYCDFNSYEVRDRSGGMPEAEYVAALIRDLEASLPQIWG-RKVISI 82

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P +I  IL  +     +    EIT+EANP + E   F  ++ AG+NR+S
Sbjct: 83  FFGGGTPSLFSPHSIDGILAAVRALLPLEHLAEITLEANPGTFEAQRFADFQAAGINRLS 142

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS   + L  LGR H+  +A  AI +A+  F  ++ DL+Y LP QT+ +   +++ A
Sbjct: 143 IGIQSFNARHLASLGRIHDGKDARRAIEIAQKNFDNINLDLMYGLPNQTLEEAREDIETA 202

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +++ V H+S Y L +E  TLF++        LP + +  D+  + +   +  G   YE S
Sbjct: 203 IAHGVQHISAYHLALEPNTLFHRYPPS----LPDDELTADMQAMIEQTLAREGYANYETS 258

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGH 313
             +  G ES HN+NYW +GDY+GIG GAHS++      V     + P+ +L K V +   
Sbjct: 259 AFARPGRESRHNMNYWLFGDYLGIGAGAHSKISFRDRIVRQMRYRQPKEYLIKSVPEMAS 318

Query: 314 --AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
              V+E+  +    +A EF+M  LRL +G + + +    G  L    +R L   +R+  I
Sbjct: 319 EPPVMEQHEVGRNDRAFEFVMNALRLTDGFAPQMFIERTGLAL-THIQRQLDEAERRQLI 377

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
            R  F R+  T  G   L+ ++
Sbjct: 378 TR-DFQRIAPTFAGRRFLNDLL 398


>gi|164686297|ref|ZP_02210327.1| hypothetical protein CLOBAR_02735 [Clostridium bartlettii DSM
           16795]
 gi|164601899|gb|EDQ95364.1| hypothetical protein CLOBAR_02735 [Clostridium bartlettii DSM
           16795]
          Length = 368

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 206/375 (54%), Gaps = 11/375 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFCV+KC YCDFNS+ +  K  +E F+     EM         R I++IFFGG
Sbjct: 2   LGLYIHIPFCVQKCKYCDFNSY-KIEKDKKEKFLNDLKKEMSLYT--NKDRKINTIFFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    + +I+D I KN+ +  + EI++E NP ++     +  +  G+NR+S+G+Q
Sbjct: 59  GTPSILSNTEMKMIMDEINKNFCIDKDAEISMECNPGTLNKEKLEFMKSLGINRLSIGLQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++E  L ++GR HN  +       AR   F  ++ DL+Y LP QT   W+  L + +  
Sbjct: 119 AVQEDLLGYIGRIHNYEQFEKNYIEARKAGFKNINIDLMYNLPHQTFEDWKETLDKIIEL 178

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +E+GT  Y M+ D D  L  E+  + +Y         +G   YEISN++
Sbjct: 179 NPEHISAYSLILEEGTQLYDMYMDKDFELSDEDEDIKMYEYAIECLKLNGYKQYEISNYA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN+ YW+  +YIG+GPGA   +    + V  +  K  + +   + KN   +  
Sbjct: 239 KEGYECKHNILYWKCKNYIGLGPGASGYI----NNVRYNNVKDLDDYHDKLSKNEKPIEF 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR-- 375
            E L+ + + +E ++MGLR+ +GI  KD+E   G N + + +  L++   ++ +  +   
Sbjct: 295 CENLTEKDKIEEKIIMGLRMNDGIIFKDFEEF-GINFEEKYKEQLKKHESLDLITKTNKG 353

Query: 376 LRCTQRGMTMLDSVI 390
            + TQ+G  + +++ 
Sbjct: 354 FKFTQKGREISNNIF 368


>gi|323704204|ref|ZP_08115783.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536270|gb|EGB26042.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 378

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 196/338 (57%), Gaps = 12/338 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           G+YVH PFC +KC YCDFNS+      +   +E  I+   T  + ++ +      +S++ 
Sbjct: 7   GIYVHIPFCKRKCYYCDFNSYANMEDSFFSFKEAIIKEIKTRKEELKDIY-----TSVYI 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  IL  I +N+++S++ EITIE NP  ++    + Y+KAGVNRIS+G
Sbjct: 62  GGGTPNVLPPIYIEEILSEIYENYSLSNDAEITIELNPGLIDEEKLKSYKKAGVNRISIG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS +   L+ +GR H  S+ I    LA   F  ++ D++YALP QT   ++  L   ++
Sbjct: 122 LQSWQNNLLKAIGRIHTVSDFIENYGLASKYFDNINIDIMYALPNQTFENFKETLTNVIA 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +EKGT  Y M++  ++ L  +   + +++    +  A+G   YEISN+
Sbjct: 182 LKPSHISCYGLILEKGTPLYDMYERNEIKLADDEFELMMFHYGAELLEANGYRHYEISNY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HN  YW    Y+G GPGA+S   VG+ R      K+ + ++ M+  +GHAV 
Sbjct: 242 ALPGFECRHNKLYWMDLHYLGFGPGAYSF--VGNKRFGNI--KNVKKYIDMIYNDGHAVD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           + + LS E +  EF+ +GLR+ +G++ KD++   G ++
Sbjct: 298 DVDELSLEDRMSEFMFLGLRMMDGVNDKDFKERFGESM 335


>gi|210609778|ref|ZP_03288110.1| hypothetical protein CLONEX_00294 [Clostridium nexile DSM 1787]
 gi|210152780|gb|EEA83786.1| hypothetical protein CLONEX_00294 [Clostridium nexile DSM 1787]
          Length = 383

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 214/386 (55%), Gaps = 17/386 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N L +Y+H PFCV+KC YCDF S     +   EN++++ + E++  + L+    + +IF 
Sbjct: 3   NELELYLHIPFCVRKCAYCDFLSSPENGET-IENYVEALIREIKAYQALSLNDIVVNIFL 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  I + + + + ++ + EIT+EANP +V       YRK G+NRIS G
Sbjct: 62  GGGTPSVLEGNQMERIFEALHEVFEIAEDAEITVEANPGTVTQEKLSAYRKLGINRISFG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ LGR H   + + +  +AR   F  ++ DLI A+PKQT+  WE  L+R +
Sbjct: 122 LQSADNGELKLLGRIHTYEQFLESYEMARTAGFTNINIDLISAIPKQTVRSWEETLKRII 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV---LPSENVAVDLYNLTQSITSAHGLHAYE 252
               +H+S Y L IE+GT F K++ +G  +   LPSE     +Y  T+ I   +G H YE
Sbjct: 182 RLKPEHISAYSLIIEEGTSFAKLYGEGSPLERDLPSEEEERLMYEKTEEILGENGYHRYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES--WLKMVRK 310
           ISN++  G E  HNL YW   +Y+G+G GA S +    +    ++ ++ E     + +RK
Sbjct: 242 ISNYAKEGMECRHNLGYWERKNYLGLGLGASSLLDNRRYSNTENLREYTECAGQPEKIRK 301

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLAGRNLDIECE--RNLQRQGF 367
           N       E L+ E+Q +EF+ +GLR   GIS +  W        D   E  R +  +G 
Sbjct: 302 N------TEHLTEEEQMEEFIFLGLRKMNGISEQAFWNCFQKTIWDCYGENIRKVMEKGL 355

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           +++ +   L  T++G+ + + V A +
Sbjct: 356 LKQREGC-LSLTKKGIDVSNYVFAEI 380


>gi|302874297|ref|YP_003842930.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulovorans 743B]
 gi|307689438|ref|ZP_07631884.1| coproporphyrinogen III oxidase [Clostridium cellulovorans 743B]
 gi|302577154|gb|ADL51166.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulovorans 743B]
          Length = 373

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YCDF S       G+EN ++ ++  +     L     + +IF GGGT
Sbjct: 4   LYIHIPFCKNKCLYCDFKSFE-----GKENLMEQYIDSLIVEMSLRVSEKVQNIFIGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ ++I  + + I K    + N E T+E NP +        ++  GVNR+S+G+Q+ 
Sbjct: 59  PTFLKEEHIKSLGEAIKK-IQKAENYEFTVEGNPGTFTREKLLLFKDMGVNRLSIGLQAW 117

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +   L+ LGR HN  E IA+  LAR I F  ++ DL++ LP QT+  W   L++ +    
Sbjct: 118 QNSLLKVLGRIHNNDEFIASYKLAREIGFNNINIDLMFGLPNQTIDMWMDTLEKVVDLNP 177

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS+Y L IE+GT FY +++ G L++P+E    ++YN  ++   + G   YEISN+S L
Sbjct: 178 EHLSIYSLIIEEGTSFYDLNEKGKLLVPTEEEEREMYNKAKTFLESKGYKQYEISNYSKL 237

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G+E  HNL YW   +YIG G  AHS +    +     IE+    ++  +++   AV E  
Sbjct: 238 GSECKHNLVYWELNEYIGCGSAAHSYIDGKRYENLSCIEE----YIDAIKEKAEAVKEVI 293

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             S E   +E++ MGLR  +GIS++D++   G++++
Sbjct: 294 INSEEDNIEEYIFMGLRKIQGISLQDFKNRFGKDIN 329


>gi|91794038|ref|YP_563689.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella denitrificans OS217]
 gi|91716040|gb|ABE55966.1| coproporphyrinogen III oxidase, anaerobic [Shewanella denitrificans
           OS217]
          Length = 400

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 207/398 (52%), Gaps = 29/398 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L ++         R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQHGELPQQAYVDALLADLAQDMDYVQGRQLHTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL + + I  +L G+        ++EIT+EANP ++E ++F  YR AGV R+S+GVQ
Sbjct: 67  GTPSLFDAKQIERLLLGVQALIPFERDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L  LGR H+ +EA+ A   A+   +   + DL++ LP Q+ ++   ++  A+S 
Sbjct: 127 SFAKDKLNLLGRIHDQNEAVVAAQKAKEADYLSFNLDLMHGLPNQSFSEAMHDIDTAVSL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 187 APPHLSWYQLTIEPNTLFHSKPPQ----LPDDEDLWQIYQQGQQKLAALGYEQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVK-------------------VGSHRVAISIE 298
             G +  HNLNYW++GDY+GIG GAH ++                    + S   A+S  
Sbjct: 243 KPGFQCRHNLNYWQFGDYLGIGCGAHGKITLMDETSVIRTVKIKHPKGYLASAETALSAN 302

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLD 355
           K  E+      K  H       + SE    E+LM  LRL   I   ++E   G+   +LD
Sbjct: 303 KSHEASPSTANKANHFAASVTPILSEDMGLEYLMNRLRLMTPIPKTEFEQRTGQAHSSLD 362

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           I   +   R G I + + +  + T +G   ++ +++  
Sbjct: 363 IGMAKAESR-GLITQDE-THWQLTSKGHMFVNDILSQF 398


>gi|93005996|ref|YP_580433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychrobacter cryohalolentis K5]
 gi|92393674|gb|ABE74949.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter
           cryohalolentis K5]
          Length = 441

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 203/375 (54%), Gaps = 42/375 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           L +Y+H P+CVKKCPYCDFNSH   V       + ++ + L +    + LT  R ISSIF
Sbjct: 31  LALYIHIPWCVKKCPYCDFNSHELPVDSQLSMYDEYVDALLQDAAMQQVLTQGREISSIF 90

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+       + DG+ K +  SS++EIT+EANP ++E   F  Y + G+NR+S+
Sbjct: 91  IGGGTPSLLPIAQYQRLFDGLRKYYQFSSDIEITMEANPGTLEHAPFAEYLEVGINRLSI 150

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS   + L  LGR HN ++A++AI  AR   F R++ DL++ LP+QTM++   ++Q A
Sbjct: 151 GVQSFSAEQLTTLGRIHNPTQALSAIKAAREAGFERVNVDLMHGLPEQTMSEALDDIQMA 210

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                 H+S YQLTIE  T+FY+       +LP+E+   D+    Q++    G   YE+S
Sbjct: 211 HDAGATHISWYQLTIEPNTVFYRSQP----ILPNEDRLADIEESGQTLLQNLGYCNYEVS 266

Query: 255 NHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI---------------- 297
             S  G +   HN+NYW++GDY+ IG GAH +V +G   +   I                
Sbjct: 267 AWSGAGDKPCQHNVNYWQFGDYLAIGAGAHGKVTIGQDMIGQDIGNEMATDIWSIDSENT 326

Query: 298 ---------EKHPESWLKMVR---KNGHAV-----VEKEFLSSEQQADEFLMMGLRLREG 340
                     + P+S+++      ++G ++     V  + +  E+   EF++  LRL  G
Sbjct: 327 QSGIYRFSKSRMPKSYIEYEEAHVQDGASISAPKMVGWQAIDEEELVSEFMLNALRLHGG 386

Query: 341 ISVKDWEMLAGRNLD 355
           ++   +E   G + D
Sbjct: 387 VAWSLFEARTGLSYD 401


>gi|238022474|ref|ZP_04602900.1| hypothetical protein GCWU000324_02382 [Kingella oralis ATCC 51147]
 gi|237867088|gb|EEP68130.1| hypothetical protein GCWU000324_02382 [Kingella oralis ATCC 51147]
          Length = 392

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 192/328 (58%), Gaps = 8/328 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  +  + + ++IQ+ + +++        R I +IF G
Sbjct: 17  PLSLYIHIPWCIQKCPYCDFNSHKIKTTLDERSYIQALIADLETELPHIWGRPIETIFIG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+   Q I  +L  I     +    EIT+EANP + E   FQG+++AG+NR+S+GV
Sbjct: 77  GGTPSVFSAQAIDSLLSAIRARVKIQPEAEITLEANPGTFEREKFQGFKEAGINRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  +GR HNA+EA AAI  A  IF R++ DL+YALP QT  Q + + Q A+++
Sbjct: 137 QSFNDAHLAAIGRIHNAAEAHAAIAAAVQIFERVNIDLMYALPHQTPAQAQADAQAAIAH 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   +P    A D+ +   +  +A G   YE S  +
Sbjct: 197 GTTHISAYHLTLEPNTPFGHTPPQG---IPDSESAQDIEDAVHAALAAAGYAQYETS--A 251

Query: 258 FLGAES---LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           F  A S    HNLNYW++GDYIGIG GAH ++   SH    S  +HP  +L  ++    A
Sbjct: 252 FATAPSQRARHNLNYWQFGDYIGIGAGAHGKISYHSHIERTSRSRHPSEYLAAMQTQPEA 311

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGIS 342
            + ++ ++++  A EF+M  LRL +G+ 
Sbjct: 312 AIRRQPIAAQDLAGEFMMNALRLIDGVP 339


>gi|296130055|ref|YP_003637305.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           flavigena DSM 20109]
 gi|296021870|gb|ADG75106.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           flavigena DSM 20109]
          Length = 412

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 201/396 (50%), Gaps = 24/396 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEM----QWMRQL 65
           G    + GVY+H PFC  +C YCDFN++      G  +   + ++ L E+    + +R+ 
Sbjct: 24  GADGRAFGVYLHVPFCAVRCGYCDFNTYTATELGGGASLASYARTALGEVALADRVLRRA 83

Query: 66  TGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             P R +S++F GGGTP+L+   ++  +LDG+   W +++  E+T EANP SV       
Sbjct: 84  GVPARPVSTVFVGGGTPTLLPVDDLVRLLDGVRTTWGIAAGAEVTTEANPDSVTPEGLAR 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AGV R+S G+QS     LR L R H+ +     +  AR+   R+S DLIY  P +++
Sbjct: 144 LAAAGVTRVSFGMQSAVPHVLRTLDRTHDPARVPDVVRWARDAGLRVSLDLIYGTPGESL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W + ++ AL   VDH+S Y L +E GT      + G+L LP E+     Y L   + S
Sbjct: 204 DDWRLSVETALMTGVDHVSAYALVVEPGTRMAVQVRRGELTLPDEDDQATKYELADDLLS 263

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GLH YE+SN +    + S HNL YWR  D+ G+GPGAHS V      V     KHP +
Sbjct: 264 AAGLHWYEVSNWARTPDDASRHNLGYWRGDDWWGVGPGAHSHVG----GVRWWNVKHPRA 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +         +E ++    A E +M+G+R+ EG+ + D  + AG    +     L 
Sbjct: 320 YADRLAAGRSPAAGREVVTGGTAALERVMLGVRIAEGLPLAD--VPAGSRPAVA---GLV 374

Query: 364 RQGFIERVQF------SRLRCTQRGMTMLDSVIANL 393
             G ++           R+  T+RG  + D+V+  L
Sbjct: 375 ADGLVDGPAALGADGPRRVVLTRRGRLLADAVVRAL 410


>gi|270158978|ref|ZP_06187634.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Legionella longbeachae D-4968]
 gi|269987317|gb|EEZ93572.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Legionella longbeachae D-4968]
          Length = 385

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 190/334 (56%), Gaps = 8/334 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + ++++IQ+ + +++   +    R I SIF GG
Sbjct: 15  LSLYIHIPWCIRKCPYCDFNSHKSPDILPEQSYIQALIADLKADLERFEIREIGSIFIGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q    +   +     +S ++EIT+EANP +VE   F  YR+ G+NR+SLG+Q
Sbjct: 75  GTPSLLSAQAYETLFTELQCILPLSQDIEITMEANPGTVEQQRFTDYRQLGINRLSLGIQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     LR LGR H+  +A  AI  ARN  F  ++ D+++ LP+Q++ Q   +L+ AL++
Sbjct: 135 SFNHDHLRALGRIHDGQQAHRAIESARNAGFTNLNLDIMHGLPQQSIIQGMEDLRSALAH 194

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLT+E  TLFYK        LPSE+ +  L     S+    G   YEIS  +
Sbjct: 195 QPEHLSWYQLTLEPNTLFYKKKP----ALPSEDESCLLEEEGLSLLKTSGFERYEISAFA 250

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HNLNYW +GDY+GIG GAH ++   +  +     + P+ +L   +     +  
Sbjct: 251 QPNHRSRHNLNYWLFGDYLGIGAGAHGKITTKNGIIRTRKHRQPKEYLDTQKP---FLAH 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            E ++++    EF++   RL + I ++ +    G
Sbjct: 308 METVNTKDLLFEFMLNTTRLEQIIPLELFTQTTG 341


>gi|38014131|gb|AAH05854.4| RSAD1 protein [Homo sapiens]
          Length = 387

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/365 (34%), Positives = 207/365 (56%), Gaps = 19/365 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGTPSL  P  +A +L+
Sbjct: 1   CNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGTPSLASPHTVAAVLE 59

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
            +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL++  LR LGR H+A
Sbjct: 60  AVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSLDDTELRLLGRTHSA 119

Query: 155 SEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  DHLSLYQL++E+GT
Sbjct: 120 CDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCDDHLSLYQLSLERGT 179

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
             +   + G L  P   +A ++Y   +++    G H YE+SN +  GA S HN  YW+ G
Sbjct: 180 ALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFARNGALSTHNWTYWQCG 239

Query: 274 DYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
            Y+G+GPGAH R      G H     I+   P++W+K V   GH   ++  L   +  +E
Sbjct: 240 QYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGTRKRVPLGRLELLEE 299

Query: 330 FLMMGLRLREGISVKDWEMLA---------GRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
            L +GLR   GI+ + W+            G N +++    L  +G ++ +    LRC+ 
Sbjct: 300 VLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERGLLQ-LDHRGLRCSW 355

Query: 381 RGMTM 385
            G+ +
Sbjct: 356 EGLAV 360


>gi|159039369|ref|YP_001538622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salinispora arenicola CNS-205]
 gi|157918204|gb|ABV99631.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salinispora arenicola CNS-205]
          Length = 407

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 216/396 (54%), Gaps = 25/396 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEM----QWMR 63
           +T  G+   GVY+H PFC  +C YCDFN++      G   +E ++++ L E+    + +R
Sbjct: 22  LTSSGTRGFGVYLHVPFCASRCGYCDFNTYTAAELGGGASREEYVEAILAELALAARVLR 81

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +   PR + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   +  
Sbjct: 82  EHRPPR-VDTVFVGGGTPTLLPATDLARILDGIDRTWGLAADAEVTTEANPESVTPRSLA 140

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R AG  RISLG+QS     L  L R H+A  A+AA   AR++ F  ++ DLIYA P +
Sbjct: 141 ALRAAGYTRISLGMQSASPGVLAVLDRQHSAGRAVAAAQEARDVGFEHVNVDLIYATPGE 200

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +   +   L +A++  VDH+S Y L +E+GT      + G+L  P ++VA D Y   ++ 
Sbjct: 201 SAADFAASLDQAITAGVDHVSAYALIVEEGTRLAAQVRRGELAYPCDDVAADRYLAAEAA 260

Query: 243 TSAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
             A G   YE+SN +    A   HNL YW  GD+ G+GPGAHS +      V     KHP
Sbjct: 261 LDAAGFSWYEVSNWARTPAARCRHNLLYWTGGDWWGLGPGAHSHIG----GVRWWNVKHP 316

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML--AGRNLDIECE 359
            ++ + +       + +E L++++   E +M+ LRL +G+ +   E+L  AGR       
Sbjct: 317 ATYAQRLAAGASPGLAREVLTADEAHTEEVMLRLRLADGLPL---EVLGSAGR----AGA 369

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
              ++ G +    ++  R   T RG  + D+V+ +L
Sbjct: 370 DRARKAGLLVESAYAAGRAVLTLRGRLLADAVVRDL 405


>gi|315127649|ref|YP_004069652.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas sp. SM9913]
 gi|315016163|gb|ADT69501.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas sp. SM9913]
          Length = 378

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 10/339 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH ++  + +  ++Q  + +++    L   R I SIF GG
Sbjct: 6   LSLYVHVPWCVQKCPYCDFNSHGQKGDIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+       +L  +     +S N EIT+EANP +VE   F+ Y KAG+NRIS+GVQ
Sbjct: 66  GTPSLLTGAAYTRLLKEVDSLIGLSDNCEITLEANPGTVETGRFKDYVKAGINRISIGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S++   L+ LGR H A EA  AA   +       + DL++ LP Q++     +L++ ++ 
Sbjct: 126 SMQNDKLKALGRIHGADEASYAAQQASEAGLNSFNLDLMHGLPGQSLDDALSDLKQIIAL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T F          LP +    D+    Q++ +  G   YEIS ++
Sbjct: 186 NPPHISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGQALLAQAGYQQYEISGYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
             G +  HNLNYWR+GDY+GIG GAH +V      V    E  KHP  ++ +++   +  
Sbjct: 242 KPGYQCQHNLNYWRFGDYLGIGCGAHGKVTDAKTGVITRTEKVKHPRGYMDIIKPYLYKS 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            + E    +  A EF M   RL E   + D+  L  + L
Sbjct: 302 WQVE---QDDLAFEFFMNRFRLIEPCPINDFNALTQQPL 337


>gi|289166179|ref|YP_003456317.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           longbeachae NSW150]
 gi|288859352|emb|CBJ13288.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Legionella longbeachae NSW150]
          Length = 374

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 190/334 (56%), Gaps = 8/334 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + ++++IQ+ + +++   +    R I SIF GG
Sbjct: 4   LSLYIHIPWCIRKCPYCDFNSHKSPDILPEQSYIQALIADLKADLERFEIREIGSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  Q    +   +     +S ++EIT+EANP +VE   F  YR+ G+NR+SLG+Q
Sbjct: 64  GTPSLLSAQAYETLFTELQCILPLSQDIEITMEANPGTVEQQRFTDYRQLGINRLSLGIQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     LR LGR H+  +A  AI  ARN  F  ++ D+++ LP+Q++ Q   +L+ AL++
Sbjct: 124 SFNHDHLRALGRIHDGQQAHRAIESARNAGFTNLNLDIMHGLPQQSIIQGMEDLRSALAH 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLT+E  TLFYK        LPSE+ +  L     S+    G   YEIS  +
Sbjct: 184 QPEHLSWYQLTLEPNTLFYKKKP----ALPSEDESCLLEEEGLSLLKTSGFERYEISAFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HNLNYW +GDY+GIG GAH ++   +  +     + P+ +L   +     +  
Sbjct: 240 QPNHRSRHNLNYWLFGDYLGIGAGAHGKITTKNGIIRTRKHRQPKEYLDTQKP---FLAH 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            E ++++    EF++   RL + I ++ +    G
Sbjct: 297 METVNTKDLLFEFMLNTTRLEQIIPLELFTQTTG 330


>gi|289578104|ref|YP_003476731.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter italicus Ab9]
 gi|289527817|gb|ADD02169.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter italicus Ab9]
          Length = 375

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 209/371 (56%), Gaps = 11/371 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y+H PFC +KC YCDFNS+   Y    E++I++ L E++     T   ++ S++ G
Sbjct: 3   EIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFEDYIRALLMEIE--SNSTKDYNVVSVYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  I +IL  + K + +  + EITIE NP  +     + Y+  G+NR+S+G+
Sbjct: 60  GGTPNLLPPYYIEVILKSVFKYYKLVDDCEITIEMNPGLITEEKLEIYKANGINRVSIGL 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ + + L+++GR H   E +    L +  F  ++ DL+YALP QT  +W+  L+  +  
Sbjct: 120 QAFQNRLLKYIGRIHTIEEFLENYELVKKFFDNINIDLMYALPTQTFKEWQETLKEIVKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L +E  T FYK+++ G L +  E   +++Y+         G H YEISN +
Sbjct: 180 QPTHISTYSLILEPNTSFYKLYEKGQLPIVDEEKELNMYHWGIEFLKEKGYHHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HN+ YW+  +Y+G G GAHS ++     V  S  +  + ++K + +   AV E
Sbjct: 240 LPTFECRHNILYWQCKNYLGFGAGAHSYME----DVRYSNIESTKDYIKGILERKSAVKE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           K  L+ + +  EF+ +GLR+ +G+  KD++ +   +L    ++ +Q   ++G I +V   
Sbjct: 296 KIKLTKQDKMAEFMFLGLRMTKGVCDKDFKKIFDVSLFEIYKKVIQKYLKEGLI-KVDNE 354

Query: 375 RLRCTQRGMTM 385
            ++ T+RG+ +
Sbjct: 355 CVKLTERGIDV 365


>gi|312171179|emb|CBX79438.1| putative oxidase [Erwinia amylovora ATCC BAA-2158]
          Length = 378

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 210/378 (55%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++     LT  R +S++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHKEYVQHLLNDLDIDLPLTSGREVSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLAPDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLEEALEDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPPR----LPDEDDLWDIFEQGHQLLCAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++ +     +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGAIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
            ++  ++   +  EF M   RL E     ++    G    ++  + +  L +    E V+
Sbjct: 297 DKRYEVADAGKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSVRAQIDTALAKGYLTETVE 356

Query: 373 FSRLRCTQRGMTMLDSVI 390
               + T++G   L+S++
Sbjct: 357 --HWQVTEKGKLFLNSLL 372


>gi|71278082|ref|YP_270336.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Colwellia psychrerythraea 34H]
 gi|71143822|gb|AAZ24295.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Colwellia psychrerythraea 34H]
          Length = 388

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 201/343 (58%), Gaps = 12/343 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFF 76
           L +Y+H P+CV+KCPYCDFNSH  +  + +++++ + + ++     R     RS+ SIF 
Sbjct: 10  LSLYIHIPWCVEKCPYCDFNSHAVKSAIPEQDYVAALIRDLDADIARFGLSTRSLHSIFI 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL    +I  +L+ +   +   +++EIT+EANP +VE + F G+ KAGVNR+S+G
Sbjct: 70  GGGTPSLFSAASIKDLLEQVLNRFDHKADIEITLEANPGTVEADKFIGFFKAGVNRLSIG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS     L  LGR H++++A  A  LA  +     + DL++ LP Q++     +L+ A+
Sbjct: 130 VQSFASDKLIKLGRIHDSNQAKIAAKLATESGVSSFNLDLMHGLPNQSLDNALDDLKTAI 189

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   +H+S YQLTIE  T+F+         LP +++  ++ +    + +  G   YEIS 
Sbjct: 190 SLNPNHISWYQLTIEPNTIFHSKPPK----LPVDDILWEIQDQGVKLLNEAGYQQYEISA 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGH 313
           ++ LG +  HNLNYW+YGDY+GIG GAH ++    S ++  +I+ KHP+ +L   R    
Sbjct: 246 YAKLGYQCQHNLNYWQYGDYLGIGCGAHGKITDSRSQKIMRTIKVKHPKGYLDDNRDFLD 305

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
            + E   +   ++  EF+M  LRL    S++ ++   G N+ +
Sbjct: 306 KLSE---VDESERPFEFMMNQLRLHSAFSIEQFQTSTGLNIKV 345


>gi|292487076|ref|YP_003529946.1| putative oxidase [Erwinia amylovora CFBP1430]
 gi|292900540|ref|YP_003539909.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291200388|emb|CBJ47516.1| putative oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291552493|emb|CBA19538.1| putative oxidase [Erwinia amylovora CFBP1430]
          Length = 378

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 210/378 (55%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++     LT  R +S++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHKEYVQHLLNDLDIDLPLTSGREVSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLAPDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPPR----LPDEDDLWDIFEQGHQLLCAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++ +     +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGAIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
            ++  ++   +  EF M   RL E     ++    G    ++  + +  L +    E V+
Sbjct: 297 DKRYEVADAGKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSVRAQIDTALAKGYLTETVE 356

Query: 373 FSRLRCTQRGMTMLDSVI 390
               + T++G   L+S++
Sbjct: 357 --HWQVTEKGKLFLNSLL 372


>gi|62391133|ref|YP_226535.1| coproporphyrinogen III oxidase [Corynebacterium glutamicum ATCC
           13032]
 gi|161486712|ref|NP_601492.2| coproporphyrinogen III oxidase [Corynebacterium glutamicum ATCC
           13032]
 gi|41326472|emb|CAF20634.1| PUTATIVE ANAEROBIC COPROPORPHYRINOGEN III OXIDASE [Corynebacterium
           glutamicum ATCC 13032]
          Length = 380

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 190/380 (50%), Gaps = 14/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
            GVY+H PFC  +C YCDFN++         G + ++ S   E++  +  L  PR   +I
Sbjct: 4   FGVYIHVPFCSTRCGYCDFNTYTAGELGSTAGPDTYLDSLEVELEMAVASLDNPRQAETI 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI    +A +L  +   + ++   E+T E+NP S     F G R+AG NRIS
Sbjct: 64  FIGGGTPSLIGADGLARVLGAVRNTFGIADGAEVTTESNPESTSPEFFDGLREAGYNRIS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS     L+ L R H     +AA   AR   F  ++ D+IY  P +T       L  
Sbjct: 124 LGMQSASSSVLKVLDRTHTPGRPVAAAKEAREAGFEHVNLDMIYGTPTETDDDVRKTLDA 183

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L   VDH+S Y L +E GT   +  + G+L  P E+V  D + L  +   + G   YE+
Sbjct: 184 VLEANVDHVSAYSLIVEDGTAMARKVRKGELPAPDEDVYADRFELIDARLRSAGFDWYEV 243

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN+ YW  GD+ G GPGAHS +     R   +I KHP  +   +     
Sbjct: 244 SNWAKPGGECKHNMGYWVDGDWWGAGPGAHSHI---GDRRFYNI-KHPARYSAQIAAGEL 299

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            + E E L++E    E +M+GLRL++G+ +  +   A   +D    R++   G +     
Sbjct: 300 PIKETERLTAEDHHTERVMLGLRLKQGVPLNLFAPAARPVID----RHIA-GGLLHVNAL 354

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L  T  G  + D +IA++
Sbjct: 355 GNLAVTDAGRLLADGIIADI 374


>gi|298492589|ref|YP_003722766.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
 gi|298234507|gb|ADI65643.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
          Length = 401

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 208/392 (53%), Gaps = 27/392 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF-------------IQSFLTEMQWMRQLT 66
             YVH PFC ++C YCDF   V     G+ ++             + +   E+      +
Sbjct: 13  AAYVHIPFCRRRCFYCDFPVFVVGDTYGEPSYRSQGKTSGTISQYVDALCHEISISLAFS 72

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P  +++IFFGGGTPSL+  + +  IL  + K + +++ VEI++E +P + ++    GY 
Sbjct: 73  QP--VTTIFFGGGTPSLLSTEQLQCILTALEKRFGIAAGVEISMEMDPGTYDLAQIAGYC 130

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             GVNR+SLGVQ+ +++ L   GR+H+ ++  AAI L   +  P+ S DLI  LP Q++ 
Sbjct: 131 STGVNRVSLGVQAFQDELLTVAGRSHSVNDIFAAIDLINQVEIPQFSLDLISGLPHQSLV 190

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           QWE  L +A+  A  H+S+Y LTIE GT F + +K GD  LP++   V +Y L Q + + 
Sbjct: 191 QWEDSLTKAVEVAPTHISIYDLTIEPGTAFGRYYKPGDNPLPTDETTVTMYQLGQKVLTG 250

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN++  G +  HN  YW    Y G G GA S V  G         K    WL
Sbjct: 251 AGYEHYEISNYAKSGHQCKHNRVYWENRSYYGFGMGAASYVH-GKRFTRPRKTKEYYEWL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ-- 363
               +NG A+++ E    E +  E LM+GLRL EG+S+       G+    E  + LQ  
Sbjct: 310 ----QNG-ALIDCEVTPLEDELLETLMLGLRLAEGLSLTVLVEKFGKEKVEEITQCLQPY 364

Query: 364 -RQGFIERVQFSRLRCTQ-RGMTMLDSVIANL 393
            +QG++E V+  RLR T   G    + V+A+L
Sbjct: 365 FKQGWVEVVE-ERLRLTDPDGFLFSNMVLAHL 395


>gi|256839178|ref|ZP_05544688.1| coproporphyrinogen III oxidase [Parabacteroides sp. D13]
 gi|298374724|ref|ZP_06984682.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_19]
 gi|256740097|gb|EEU53421.1| coproporphyrinogen III oxidase [Parabacteroides sp. D13]
 gi|298269092|gb|EFI10747.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_19]
          Length = 375

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 209/382 (54%), Gaps = 20/382 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC K+C YCDF S+   +YK   E +I + + EM+  +   G  ++ +I+FGG
Sbjct: 3   GLYIHVPFCAKRCLYCDFFSNTEMKYK---EPYINALIKEMELRKGYIGNEALETIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ ++   I + I +++ V+  +EIT+EANP  ++       R    NR+S+GVQ
Sbjct: 60  GTPSQLDEKDFGKIFEAIYRHFDVAEQMEITLEANPDDMKREYVSLLRNYPFNRVSMGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+  
Sbjct: 120 SFHPEDLRFLNRRHDRQQAIKAVELCKEYGITNISIDLIYGLPNQTQQAWEENLRQAIRL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
            V HLS Y L  E+GT  YK+ + G +   +E ++V  ++ L   +  A  LH YEISN 
Sbjct: 180 DVPHLSAYHLIYEEGTALYKLLEAGKVTPINEELSVSFFSTLIDRLAEAGYLH-YEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KNGHA 314
           +  G  S HN +YW    Y+G+GP AHS          I  E +P S    +   +NGH 
Sbjct: 239 TRPGFFSKHNSSYWTGKKYLGLGPSAHS-------YNGIDREWNPSSLPIYIDGIENGHP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
            +E E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + + 
Sbjct: 292 TIESEDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT 351

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              +L  ++ G+ + D ++++L
Sbjct: 352 D-DKLILSKSGIFVSDGIMSDL 372


>gi|258592996|emb|CBE69307.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW)
           [NC10 bacterium 'Dutch sediment']
          Length = 397

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 212/391 (54%), Gaps = 11/391 (2%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQL 65
           ++ +  Q S S G+Y+H P+C+ +C YCDFNS+ R   V  E ++++   E+  +    +
Sbjct: 12  DSTLNTQHSTSFGLYIHIPYCLSRCQYCDFNSY-RFDDVQIEQYLEALAQEIAHRASSDV 70

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + S+FFGGGTPS++    +  ILD     +T     E+++EANP +V++   +  
Sbjct: 71  IRHRPVCSVFFGGGTPSILHASQLIGILDQCRAAFTFEVGAEVSLEANPGTVDLPKLRTL 130

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R+ GV R+S+GVQ+++++ L+ +GR H A EA  A  +AR   F  ++ D+++ LP Q M
Sbjct: 131 REGGVTRLSIGVQAVQDRLLQRIGRAHTAHEAERAYRMAREAGFGDINLDVMFGLPGQNM 190

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L   +    +H+S Y L +E+GT  Y+ H+ G++ LP E     +Y +      
Sbjct: 191 DDWSETLDWVIGVEPEHVSAYGLILEEGTPLYQEHRKGEIGLPDEETETMMYQMAVDRLC 250

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G   YEISN +  G    HNL YW++ +Y+GIG GAHS   V   R     E  P  +
Sbjct: 251 NDGFEHYEISNFARPGFRCRHNLVYWQHQEYVGIGAGAHS--FVAGRR--FYNELLPARY 306

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NL 362
           +  + +   AV   E LS+E    E LM+GLRLR G+ V+ ++ + G       +R   L
Sbjct: 307 VSAIAERETAVACGEELSAEMLRSERLMLGLRLRSGLDVQTFKDVLGVEELAASDRVTRL 366

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              GF+  ++  R++  +RG+ + + +I  L
Sbjct: 367 LDDGFL-CLKDGRVQIAERGLLVANELIVQL 396


>gi|254784467|ref|YP_003071895.1| oxygen-independent coproporphyrinogen III oxidase [Teredinibacter
           turnerae T7901]
 gi|237687347|gb|ACR14611.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Teredinibacter turnerae T7901]
          Length = 388

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 200/382 (52%), Gaps = 15/382 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH  R ++  + +I + L +    R     R I S+FFGG
Sbjct: 12  LSLYVHIPWCVRKCPYCDFNSHSVRSELPVDAYIDALLADCSADRHFAQQRKIRSVFFGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + IA +LDG+ +    + + EIT+E NP + E +NF  YR AGVNRISLG Q
Sbjct: 72  GTPSLLPGKAIARLLDGLRERLDFTRDCEITLETNPGTAEYSNFADYRAAGVNRISLGAQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H       A   AR+  F  ++ DL++AL  Q       +L+ A++ 
Sbjct: 132 SFNALQLQQLGRIHQPENIQIAFTQARDAGFDNINLDLMFALQGQNCADAMRDLEAAIAL 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S YQLTIE  T FY         LP ++ + ++      + +      YE+S ++
Sbjct: 192 EPEHISWYQLTIEPNTAFYSNPPS----LPDDDTSWEIQQAGMQLLADSNYAQYEVSAYA 247

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-----PESWLKMVRKNG 312
             G ++ HN+NYW +GDY+ IG GAH ++          IE++     P+ +L   +   
Sbjct: 248 RAGKQAAHNINYWEFGDYMAIGAGAHGKITWPEEN---RIERYQKTRLPDHYLAAAQTCA 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERV 371
                +E L+      EF+M  LRL +G++ + +    G  L  +E +    R+  +   
Sbjct: 305 F-TSHRETLAEHNLPFEFMMNALRLNQGVASELFTARTGLPLASLEPQLTPLREKGLLGT 363

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              RL  T  G   L+SV+ +L
Sbjct: 364 DPQRLYTTTLGHQYLNSVLESL 385


>gi|260583842|ref|ZP_05851590.1| oxygen-independent coproporphyrinogen III oxidase [Granulicatella
           elegans ATCC 700633]
 gi|260158468|gb|EEW93536.1| oxygen-independent coproporphyrinogen III oxidase [Granulicatella
           elegans ATCC 700633]
          Length = 381

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 194/339 (57%), Gaps = 10/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             Y+H PFC   C YCDFN   + +  GQ  + ++   + EMQ   +      + +++ G
Sbjct: 6   AAYIHIPFCSHICYYCDFN---KVFIEGQPVDEYVDLLVREMQLRAKAHPISPLETLYIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS + P+ +A + +GI +   +  N E T+E NP   ++   +  ++ GVNRIS+GV
Sbjct: 63  GGTPSTLTPKQLATLFEGIHRYLPLEKNCEFTMELNPDDGQMERLEVMKEYGVNRISMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L+ +GR H+    + +I  AR + F  +S DLI+ LP+QT+  +E  L+ A+ 
Sbjct: 123 QSFNDELLKKIGRKHSKKTVLESIGNARKLGFENISIDLIFRLPQQTIQDFEDSLKIAMD 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S+Y L +E+ T+FY + + G L LP+++   D++ L      + G H YEISN+
Sbjct: 183 LDLPHYSIYSLILEQKTVFYNLMRQGKLPLPTQDEEADMFQLAMDSMESFGRHHYEISNY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL+YW+  +Y+G G GAH  +    ++    I    + +L+ +R     ++
Sbjct: 243 ALPGFESRHNLHYWKADEYLGFGAGAHGYLNQERYQNCGPI----QHYLEPLRNFALPIL 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +K+ LS + Q +EF+ +GLR   G+S  +++   GRN++
Sbjct: 299 QKDVLSKKSQIEEFMFLGLRKMSGVSNLEFKRRFGRNMN 337


>gi|157960949|ref|YP_001500983.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella pealeana ATCC 700345]
 gi|157845949|gb|ABV86448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella pealeana ATCC 700345]
          Length = 378

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 190/340 (55%), Gaps = 11/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q  +I + + +++        R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQHGELPQTEYIDALIKDLKQDLHYVQGRRLDTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  +L  + K    S N+EIT+EANP ++E ++F+ Y KAGV R+S+GVQ
Sbjct: 67  GTPSLFDAAQIGRLLAEVDKLVPFSDNIEITMEANPGTLEHDDFEAYCKAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR HN  EA IAA     + +   + DL++ LP Q+  +   +++ A   
Sbjct: 127 SFSSDKLNLLGRIHNKDEAHIAAQKAKVSGYQSFNLDLMHGLPNQSFDEALSDIETAAEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS ++
Sbjct: 187 APPHLSWYQLTIEPNTLFHSKPPQ----LPDDENLWQIYEQGQKRLAALGYQQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH ++  +  +++  +++ KHP+ +L       +  
Sbjct: 243 KEGFQCRHNLNYWQFGDYLGIGCGAHGKITLLDDNKIVRTVKIKHPKGYLAA----DNYT 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E   +  E +A E+LM  LRL   I   ++E   G   D
Sbjct: 299 DETTEVVEEDRALEYLMNRLRLMSPIPKVEFEQRTGLTRD 338


>gi|90407092|ref|ZP_01215281.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Psychromonas sp. CNPT3]
 gi|90311814|gb|EAS39910.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Psychromonas sp. CNPT3]
          Length = 379

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 201/341 (58%), Gaps = 12/341 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH  +  + +E ++ + + +++        R + +IF GG
Sbjct: 7   LSLYIHIPWCIEKCPYCDFNSHKLQGTIPEEAYLSALINDLKIDLVYAQGRILDTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSLI  + IA +L  I        ++EIT+EANP ++E +    +++AG++R S GVQ
Sbjct: 67  GTPSLISAKGIAWLLSEIRNLIAFKKDIEITLEANPGTIENSKIADFKEAGISRFSFGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR HNA EAI AA H  +      + DL++ LP Q+++    +LQ A+  
Sbjct: 127 SFQNDKLQRLGRIHNADEAIRAAKHAKKCAIKTFNLDLMHGLPDQSLSDALSDLQCAIDL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T ++        +LP +++  D+    Q++ + +G   YEIS +S
Sbjct: 187 QPTHISWYQLTIEPNTQYFSHPP----ILPEDDLLWDIQEAGQALLAENGYIQYEISGYS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHAV 315
             G E  HNLNYW + DYIGIG GAH ++ +   +++  +++ KHP+ +L+  R    A 
Sbjct: 243 KKGFECQHNLNYWSFSDYIGIGCGAHGKLTLPLQNKIVRTVKVKHPKGYLQSDR----AF 298

Query: 316 VEK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           ++K E ++ ++ A E+++  LRL   I  + +E   G +LD
Sbjct: 299 LDKYEHVARDELAFEYMLNRLRLFVPIPFEQFESYTGLSLD 339


>gi|218887462|ref|YP_002436783.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758416|gb|ACL09315.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 448

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/378 (35%), Positives = 199/378 (52%), Gaps = 11/378 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC F+S          +++++ L E+       G   ++SIFFGGGT
Sbjct: 3   LYIHVPFCRRKCRYCAFHSLEMGAATVVRDYVETLLRELALWGDRMGGVPVTSIFFGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQS 139
           PSL+  + I  ILD + K + V    EI++EANP S+   +  +   K GVNR+S+GVQ 
Sbjct: 63  PSLLPARTIGTILDRVGKAFAVQPGAEISMEANPESLTRPSELRTLLKVGVNRLSMGVQC 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  L  LGR H A EA+ A    R   F  +  DLI+ LP QT+ QW  +L+  +   
Sbjct: 123 LDDAMLHTLGRPHRAREALDAFRAVRAAGFQNVGMDLIWGLPGQTLRQWMQQLKEVVRLR 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y LT+E GT        G L LP E     ++     +    G   YEISN + 
Sbjct: 183 PDHLSCYGLTLEPGTPLEDDCATGRLDLPPERAQAAMFMDGAELLETEGYIHYEISNFAR 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G +  HNL YW   DY+G+GP A S   +G  R   + E H  +W + V   G    E 
Sbjct: 243 MGFQCRHNLGYWEGEDYLGLGPSAAS--TLGGLRWN-NPEDH-AAWTRQV-DEGRVGAEA 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L+ + +  E +M+ LR   G+ VK +  L GR+   + +R    L R+G + R++   
Sbjct: 298 ELLTPQTRVLELIMLRLRTARGLRVKAYRELTGRDFLRDHKRLVHLLHREGLL-RIRDGY 356

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ GM + +S++  L
Sbjct: 357 LRLTRSGMLVSNSILERL 374


>gi|256821438|ref|YP_003145401.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
 gi|256794977|gb|ACV25633.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
          Length = 410

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 208/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +Y+H P+C++KCPYCDFNSH  +       + ++ +I   L +++    L   R + 
Sbjct: 8   PLSLYIHIPWCIRKCPYCDFNSHGIKQLGGLDDIPEQEYIDRLLVDLEQELPLVWGRRLH 67

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL   + +  ++ G+        ++EIT+EANP + E   F G+R+AGVNR
Sbjct: 68  SIFIGGGTPSLFSAEGMDRLISGVRARIPFEGDIEITMEANPGTFEAERFAGFRQAGVNR 127

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS + + L  LGR HN  +AIAA   A    F   + DL++ LP QT+ Q   +L
Sbjct: 128 LSIGVQSFDARHLELLGRVHNPEQAIAAAEFAHQAGFSSFNLDLMHGLPDQTIEQALSDL 187

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q A+     H+S YQLTIE  TLFY+        LP ++    +    Q++   H    Y
Sbjct: 188 QTAIDLKPQHISWYQLTIEPNTLFYQQPP----TLPIDDTLWTIQEQGQALLQQHSYGQY 243

Query: 252 EISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMV 308
           E+S ++      S HNLNYW++GDY+GIG GAH ++ ++   ++  + + +HP+ +L+  
Sbjct: 244 EVSAYAREPKFRSQHNLNYWQFGDYLGIGAGAHGKITRLDLEQIQRTTKSRHPKDYLQ-- 301

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGF 367
            K+   +   + + + +   EF++  LRL +G+    ++   G  L DI+   N      
Sbjct: 302 -KSVADIRTSQPIPAPELPFEFMLNALRLLDGVPTTYFQQRTGLLLSDIQPAINEAIADG 360

Query: 368 IERVQFSRLRCTQRGMTMLDSVI 390
           +      R+  T++G   L+ ++
Sbjct: 361 LLHNSKDRIEPTEKGSLFLNELL 383


>gi|269137629|ref|YP_003294329.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|267983289|gb|ACY83118.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|304557694|gb|ADM40358.1| Coproporphyrinogen III oxidase, oxygen-independent [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 215/379 (56%), Gaps = 18/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +Y+H P+CV+KCPYCDFNSH ++ ++ Q+ ++   L ++ Q + ++ G R +S++F 
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPQQAYVDHLLADLDQELPRVAG-RPLSTLFI 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + +  +LDG+     ++++ EIT+EANP +VE   F  Y++AGVNRIS+G
Sbjct: 65  GGGTPSLLSGEALQRLLDGVRARLPLAADAEITLEANPGTVEAERFSAYQRAGVNRISIG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           VQS     L+ LGR H   EAIAA  LA  +  R  + DL++ LP+Q+  +   +L++A+
Sbjct: 125 VQSFSADKLQRLGRIHGPQEAIAAARLATALGLRSFNLDLMHGLPQQSQEEALDDLRQAI 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    HLS YQLTIE  TLF          LP ++   +++     +  A G   YE S 
Sbjct: 185 ALNPPHLSWYQLTIEPNTLFGSRPPR----LPDDDALWEIFEQGDRLLRASGYQQYETSA 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           ++  G +  HNLNYWR+GDY+GIG  AH ++     R+    + +HP  +++     G+ 
Sbjct: 241 YALPGRQCQHNLNYWRFGDYLGIGCSAHGKLTFADGRIERRAKTRHPRGYMQ-----GNY 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERV 371
           + +++ ++  ++  EF M   RL E     D+    G +   +  + E  L  QG+I   
Sbjct: 296 LDQRQQVAMAERPFEFFMNRFRLLEPAPRADFSAYTGVDEATIRPQLEAALA-QGYISET 354

Query: 372 QFSRLRCTQRGMTMLDSVI 390
             S  + T  G   L+S++
Sbjct: 355 P-SHWQVTPHGKLFLNSLL 372


>gi|302871651|ref|YP_003840287.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574510|gb|ADL42301.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 378

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 206/377 (54%), Gaps = 15/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSIF 75
           +G+Y+H PFC KKC YCDF S    Y+   +N +  + + ++      +      I +I+
Sbjct: 6   IGLYIHIPFCKKKCYYCDFVS----YENANDNLVFEYFSSLESELIFYKENYEFEIDTIY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I  + I  + + I  N+ +  N EITIEANP S+     Q Y  AGVNR+S+
Sbjct: 62  IGGGTPSFISAKYILKLFEFIYSNFKIKDNYEITIEANPESITHEKLQSYSLAGVNRLSV 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL +  L+ +GR HN+  A+ ++ +    F   + D+I  LP Q    +   L + L
Sbjct: 122 GIQSLNDTELKAIGRIHNSEVALKSLSIVPLYFENFNVDVIVGLPYQNFESFMQTLNKLL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            ++  H+S+Y L IE+GT  ++ ++  +  LPSE+    ++   + I    G   YEISN
Sbjct: 182 DFSPPHISIYSLKIEEGTPLFENYEKYESFLPSEDEERKMFWCAKRILFETGFCHYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNL YW   +YIGIG  AHS      +    +I +    ++  ++KNG AV
Sbjct: 242 FAKKGFECKHNLKYWNCNEYIGIGCAAHSYFDGYRYYNTSNISE----YINKIKKNGLAV 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQ 372
             KEF+S E+   EF+++GLR  EG S+ ++    G + + + +     L++ G IE ++
Sbjct: 298 EGKEFISVEESEKEFIILGLRKIEGFSLNEFRERFGADFERKYKYQIEKLKKYGLIE-IE 356

Query: 373 FSRLRCTQRGMTMLDSV 389
            + ++ T+RG+ + + V
Sbjct: 357 KNCVKLTERGIDLANLV 373


>gi|54298245|ref|YP_124614.1| hypothetical protein lpp2303 [Legionella pneumophila str. Paris]
 gi|53752030|emb|CAH13456.1| hypothetical protein lpp2303 [Legionella pneumophila str. Paris]
          Length = 375

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 191/334 (57%), Gaps = 8/334 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C++KCPYCDFNSH     + +  ++Q+ + +++        R I+SIF GG
Sbjct: 4   LSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYVQALIEDLKTDISSYNTREINSIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    + + +      + N+EIT+EANP +VE + F  YR++G+NR+SLG+Q
Sbjct: 64  GTPSLFSAEAYNNLFNELKHMLPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALSY
Sbjct: 124 SFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTALSY 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS YQLTIE  T+FYK        LPSE     L     ++    G + YEIS  S
Sbjct: 184 QPEHLSWYQLTIEPNTVFYKHTPP----LPSEEEDYLLEEQGFALLHNSGYNRYEISAFS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L   +     +  
Sbjct: 240 KPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKP---YLAA 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +E ++ ++   EF++   RL + I ++ +    G
Sbjct: 297 RETITGKELLFEFMLNTTRLEQSIPLELFTTATG 330


>gi|330722154|gb|EGH00056.1| Radical SAM family enzyme2C [gamma proteobacterium IMCC2047]
          Length = 343

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 191/331 (57%), Gaps = 16/331 (4%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++SIFFGGGTPSL    +I  +L+G+ ++ + S ++EIT+EANP + E   F  +R+A
Sbjct: 18  RPLASIFFGGGTPSLFSASSIGRLLEGVERDISFSKDIEITLEANPGTFEQQKFADFRRA 77

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+G+QS ++  L+ LGR HN+ EA  AI +A+   F   + DL++ LP Q++ Q 
Sbjct: 78  GINRLSIGIQSFDDLQLQKLGRIHNSGEAQRAIGMAQQAGFDNFNLDLMHGLPDQSIKQA 137

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +LQ A+ +A  HLS YQLTIE  T FYK        LPS++    ++   Q++ +  G
Sbjct: 138 LADLQTAIDFAPKHLSWYQLTIETNTEFYKQPP----RLPSDDARWQIFQQGQALLAEEG 193

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-----VGSHRVAISIEKHPE 302
              YE+S +S  G  SLHNLNYWR+GDY+GIG GAH ++       G+  +     + P+
Sbjct: 194 FQQYEVSAYSQPGKASLHNLNYWRFGDYLGIGAGAHGKITRLSKGAGATLMRTRKTRTPK 253

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECER 360
            +L  +   G  +   E +  E  A EF+M  LRL EG ++  ++   G    L     +
Sbjct: 254 DYLNAI-GAGRLI---ETIDQEDIAGEFMMNALRLNEGFTLDAFKQATGLPGTLLSSGIK 309

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
               +G +E  + +R++ T+ G   LD ++A
Sbjct: 310 QASAKGLLEIDELNRVKPTKNGRLFLDDLVA 340


>gi|301308407|ref|ZP_07214361.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 20_3]
 gi|300833877|gb|EFK64493.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 20_3]
          Length = 385

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 209/382 (54%), Gaps = 20/382 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC K+C YCDF S+   +YK   E +I + + EM+  +   G  ++ +I+FGG
Sbjct: 13  GLYIHVPFCAKRCLYCDFFSNTEMKYK---EPYINALIKEMELRKGYIGNEALETIYFGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ ++   I + I +++ V+  +EIT+EANP  ++       R    NR+S+GVQ
Sbjct: 70  GTPSQLDEKDFGKIFEAIYRHFDVAEQMEITLEANPDDMKREYVSLLRNYPFNRVSMGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+  
Sbjct: 130 SFHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTQQAWEENLRQAIRL 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
            V HLS Y L  E+GT  YK+ + G +   +E ++V  ++ L   +  A  LH YEISN 
Sbjct: 190 DVPHLSAYHLIYEEGTALYKLLEAGKVTPINEELSVSFFSTLIDRLAEAGYLH-YEISNF 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KNGHA 314
           +  G  S HN +YW    Y+G+GP AHS          I  E +P S    +   +NGH 
Sbjct: 249 ARPGFFSKHNSSYWTGKKYLGLGPSAHS-------YNGIDREWNPSSLPIYIDGIENGHP 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
            +E E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + + 
Sbjct: 302 TIESEDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT 361

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              +L  ++ G+ + D ++++L
Sbjct: 362 G-DKLILSKSGIFVSDGIMSDL 382


>gi|119470551|ref|ZP_01613254.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonadales bacterium TW-7]
 gi|119446252|gb|EAW27529.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonadales bacterium TW-7]
          Length = 369

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 187/339 (55%), Gaps = 18/339 (5%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +H P+CV+KCPYCDFNSH ++  + +  ++Q  + +++    L   R I SIF GGGTPS
Sbjct: 1   MHVPWCVQKCPYCDFNSHGQKGDIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIGGGTPS 60

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L+       +L  +     ++ N EIT+EANP +VE   F+ Y KAG+NRIS+G+QSL+ 
Sbjct: 61  LLTGDAYTRLLSEVDSLIGLTDNCEITLEANPGTVETGRFKEYVKAGINRISIGIQSLQS 120

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             L+ LGR H A+EA  A   A+       + DL++ LP QT+     +L++ ++    H
Sbjct: 121 DKLKALGRIHGANEATYAAEQAKEAGLNSFNLDLMHGLPGQTLDDALSDLKQIIALDPPH 180

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           +S YQLTIE  T F          LP +    D+    Q++ +  G   YEIS ++  G 
Sbjct: 181 ISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGQALLAKAGYIQYEISGYAKPGY 236

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVR----KNGHAV 315
           +  HNLNYWR+GDY+GIG GAH +V      +    E  KHP  ++ MV+    K+ H  
Sbjct: 237 QCQHNLNYWRFGDYLGIGCGAHGKVTNAKTGIITRTEKVKHPRGYMDMVKPYLYKSWH-- 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           VE++ L     A EF M   RL E   ++D+  L  + L
Sbjct: 295 VEQDDL-----AFEFFMNRFRLVEPCPIEDYSALTNQPL 328


>gi|302389468|ref|YP_003825289.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200096|gb|ADL07666.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermosediminibacter oceani DSM 16646]
          Length = 374

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/338 (36%), Positives = 194/338 (57%), Gaps = 9/338 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFCVKKC YCDFNS+     +    ++ S   E+ +   +   R ++SI+ GG
Sbjct: 4   LALYVHIPFCVKKCAYCDFNSYAETESIPL--YVDSLKREISFYSGIN--RIVTSIYIGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++   ++  I++ I   + +S+++E T+EANP ++        R AGVNR+S+G+Q
Sbjct: 60  GTPTVLSEGDLTSIIETIYGAFNISASLEFTVEANPETLSRRKLAVLRDAGVNRLSMGLQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A        +AR   F  ++ DLI+ LP Q++  +   L R    
Sbjct: 120 AFQDELLKIMGRIHTAKGFEEKFIIAREEGFDNINVDLIFGLPNQSVDDFRYSLGRLADL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +H+S Y LT+E+GT FY++ K+G L LPSE+    +Y+  + I    G   YEISN +
Sbjct: 180 SPEHVSCYGLTVEEGTEFYRLQKEGRLPLPSEDEERKMYHTAREILKERGYSHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YW YG+Y+G+G GAHS +       A  I  + E     VR  G  V  
Sbjct: 240 KPGRECRHNLVYWTYGEYLGLGAGAHSFMDGVRFYNAYGIRDYAER----VRSRGKGVEG 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +E LS E+Q  EF+++GLRL +G+   ++    G++ D
Sbjct: 296 EESLSLEEQQSEFMILGLRLIKGVRKAEFYKRFGKDPD 333


>gi|291302905|ref|YP_003514183.1| oxygen-independent coproporphyrinogen III oxidase [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572125|gb|ADD45090.1| oxygen-independent coproporphyrinogen III oxidase [Stackebrandtia
           nassauensis DSM 44728]
          Length = 406

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 203/390 (52%), Gaps = 24/390 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTG--PRS 70
           S+  G+YVH PFC  +C YCDFN++        V +E+F +    E+    ++ G  PR 
Sbjct: 27  SHDFGIYVHIPFCASRCGYCDFNTYTAAELGSGVSRESFPRLLEAEIDLAARVLGDVPRP 86

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           IS+IFFGGGTPSL+    +  I+  +   + ++ + EIT EANP SV+   F+  R  G 
Sbjct: 87  ISTIFFGGGTPSLLPASELTGIVAKLESTFGLTPDAEITTEANPESVDPEYFRQLRAGGF 146

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            R+SLG+QS   + L  L R H    A+ A   AR   F  ++ DLIY  P +T   +E 
Sbjct: 147 TRVSLGMQSTARRVLAVLERGHTPGRALDAAREAREAGFEHVNLDLIYGTPGETAEDFEA 206

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ A+    DH+S Y L +E GT      + GD+  PS++ A D Y   + +    G  
Sbjct: 207 SLRAAVDTGADHVSAYSLIVEDGTRLAGQVRRGDIPAPSDDEAADRYLAAERVLGEAGFE 266

Query: 250 AYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            YE+SN +    A   HNL YWR GD+ G+GPGAHS V      V     KHP  + + +
Sbjct: 267 WYEVSNWARSEAARCRHNLLYWRGGDWWGLGPGAHSHVG----GVRWWNVKHPARYGQRL 322

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
                    +E L+  Q+  E +++G+RL +G+++          LD + +RN ++   +
Sbjct: 323 TDGLSPAQGRELLTPPQRHMEDVLLGVRLADGLALC--------ALDADGQRNARKAAAE 374

Query: 366 GFIERVQFS--RLRCTQRGMTMLDSVIANL 393
           G ++    +  R+R T RG  + D+V+ +L
Sbjct: 375 GLLDPAALAADRVRLTLRGRLLADAVVRDL 404


>gi|20807433|ref|NP_622604.1| coproporphyrinogen III oxidase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515956|gb|AAM24208.1| Coproporphyrinogen III oxidase and related FeS oxidoreductases
           [Thermoanaerobacter tengcongensis MB4]
          Length = 375

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 210/381 (55%), Gaps = 15/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
            +G+Y+H PFC KKC YCDFNS+      G E+ ++ +L  +    +    RS  + S++
Sbjct: 3   EIGIYIHIPFCKKKCYYCDFNSYA-----GYEHLMEDYLKALLEEVKTYSDRSFRVISVY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ + P ++  +L  + K++ VS + EITIE NP  +  +  + Y+  G+NRIS+
Sbjct: 58  IGGGTPNFLPPSHVERVLSEVHKDYNVSRDAEITIEVNPGLLTEDKLKIYKINGINRISM 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+ + + L ++GR H A + +    L R  F  ++ DLIYALP Q+  +W+  L + +
Sbjct: 118 GLQAFQNRLLEYIGRIHTAEDFLENYALVRKYFDNVNVDLIYALPTQSFEEWQETLTKVV 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L +E+ TLF +++K+  L +  E   + +Y+       + G   YEISN
Sbjct: 178 ELKPEHISTYSLILEENTLFGRLYKENRLPVVGEEEELKMYHWGIEFLKSKGYCHYEISN 237

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            + LG +  HN+ YW   +Y+G G GAHS  +         IEK+ E+ LK  RK+    
Sbjct: 238 FALLGYQCRHNILYWECREYLGFGAGAHSYFEGTRWNNVERIEKYIEAILK--RKDAREE 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQ 372
           +    LS E +  EF+ +GLR+R+G+  +++    G ++    E      ++ G IE+ +
Sbjct: 296 IIN--LSFEDKMSEFMFLGLRMRKGVCEEEFRKRFGISMFERYEEIFIKYEKMGLIEKDK 353

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              +R T++G+ + + +  + 
Sbjct: 354 -DCVRLTEKGIDVSNVIFEDF 373


>gi|297544377|ref|YP_003676679.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296842152|gb|ADH60668.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 375

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 208/371 (56%), Gaps = 11/371 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y+H PFC +KC YCDFNS+   Y    E++I++ L E++     T   ++ S++ G
Sbjct: 3   EIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFEDYIRALLMEIE--SNSTKDYNVVSVYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  I +IL  + K + +  + EITIE NP  +     + Y+  G+NR+S+G+
Sbjct: 60  GGTPNLLPPYYIEVILKSVFKYYKLVDDCEITIEMNPGLITEEKLEIYKVNGINRVSIGL 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ + + L+++GR H   E +    L +  F  ++ DL+YALP QT  +W+  L+  +  
Sbjct: 120 QAFQNRLLKYIGRIHTIEEFLENYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L +E  T FYK+++ G L +  E   + +Y+         G H YEISN +
Sbjct: 180 QPTHISTYSLILEPNTSFYKLYEKGQLPVVDEEKELSMYHWGIEFLKEKGYHHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HN+ YW+  +Y+G G GAHS ++     V  S  +  + ++K + +   AV E
Sbjct: 240 LPTFECRHNILYWQCKNYLGFGAGAHSYME----DVRYSNIEGTKDYIKGILERKSAVKE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           K  L+ + +  EF+ +GLR+ +G+  KD++ +   +L    ++ +Q   ++G I +V   
Sbjct: 296 KIKLTKQDRMAEFMFLGLRMTKGVCDKDFKKIFDVSLFEIYKKVIQKYLKEGLI-KVDNE 354

Query: 375 RLRCTQRGMTM 385
            ++ T+RG+ +
Sbjct: 355 CVKLTERGIDV 365


>gi|262382389|ref|ZP_06075526.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_33B]
 gi|262295267|gb|EEY83198.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_33B]
          Length = 375

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 208/382 (54%), Gaps = 20/382 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC K+C YCDF S+   +YK   E +I + + EM+  +   G  ++ +I+FGG
Sbjct: 3   GLYIHVPFCAKRCLYCDFFSNTEMKYK---EPYINALIKEMELRKGYIGNEALETIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ ++   I + I +++ V+   EIT+EANP  ++       R    NR+S+GVQ
Sbjct: 60  GTPSQLDEKDFGKIFEAIYRHFDVAEQAEITLEANPDDMKREYVSLLRNYPFNRVSMGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+  
Sbjct: 120 SFHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTQQAWEENLRQAIRL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
            V HLS Y L  E+GT  YK+ + G +   +E ++V  ++ L   +  A  LH YEISN 
Sbjct: 180 DVPHLSAYHLIYEEGTALYKLLEAGKVTPINEELSVSFFSTLIDRLAEAGYLH-YEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KNGHA 314
           +  G  S HN +YW    Y+G+GP AHS          I  E +P S    +   +NGH 
Sbjct: 239 ARPGFFSKHNSSYWTGKKYLGLGPSAHS-------YNGIDREWNPSSLPIYIDGIENGHP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
            +E E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + + 
Sbjct: 292 TIESEDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT 351

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              +L  ++ G+ + D ++++L
Sbjct: 352 G-DKLILSKSGIFVSDGIMSDL 372


>gi|307611199|emb|CBX00844.1| hypothetical protein LPW_25481 [Legionella pneumophila 130b]
          Length = 370

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 190/332 (57%), Gaps = 8/332 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H P+C++KCPYCDFNSH     + +  +IQ+ + +++        R I+SIF GGGT
Sbjct: 1   MYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL   +    + + + +    + N+EIT+EANP +VE + F  YR++G+NR+SLG+QS 
Sbjct: 61  PSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALSY  
Sbjct: 121 NPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSITQGLEDLKTALSYQP 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS YQLTIE  T+FYK        LPSE     L     ++    G   YEIS  S  
Sbjct: 181 EHLSWYQLTIEPNTVFYKHTPP----LPSEEEDYLLEEQGFALLHNSGYQRYEISAFSKP 236

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L   +     +  +E
Sbjct: 237 EKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLDNEKP---YLAARE 293

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            ++ ++   EF++   RL + I ++ +    G
Sbjct: 294 TITGKELLFEFMLNTTRLEQSIPLELFTTATG 325


>gi|313111995|ref|ZP_07797782.1| putative oxidase [Pseudomonas aeruginosa 39016]
 gi|310884284|gb|EFQ42878.1| putative oxidase [Pseudomonas aeruginosa 39016]
          Length = 363

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 120/334 (35%), Positives = 194/334 (58%), Gaps = 21/334 (6%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           ++KCPYCDFNSH    ++ +E ++ + L ++ Q +R + G R + SIFFGGGTPSL   +
Sbjct: 1   MRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHG-RRLGSIFFGGGTPSLFSAK 59

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GVQS +   L+ 
Sbjct: 60  ALGRLLEGVERKVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGVQSFQADKLQA 119

Query: 148 LGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+ A  HLS YQ
Sbjct: 120 LGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALALAPTHLSWYQ 179

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHN 266
           LT+E  T+F+    +    LP +++  D+    Q++  AHG   YE S ++  G  + HN
Sbjct: 180 LTMEPNTVFWSQPPE----LPEDDILWDIQEAGQALLDAHGYRQYETSAYARDGLRARHN 235

Query: 267 LNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE-- 324
           LNYW +GD++GIG GAH+++     R+         +W   + K+ +   +K F + E  
Sbjct: 236 LNYWSFGDFLGIGAGAHAKLSAPDGRIV-------RTWKTRLPKD-YLNPQKAFQAGERP 287

Query: 325 -QQAD---EFLMMGLRLREGISVKDWEMLAGRNL 354
            + AD   EF+M  LRL +G+    +    G+ L
Sbjct: 288 LEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPL 321


>gi|237785908|ref|YP_002906613.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758820|gb|ACR18070.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 390

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 198/395 (50%), Gaps = 19/395 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPR 69
           M  +  +S GVY+H PFCV +C YCDFN++  R    Q++     L  +  + R+L+   
Sbjct: 1   MPPEKKDSFGVYIHVPFCVTRCGYCDFNTYTPRELGVQDDAPSPVLQYLDAVERELSRAA 60

Query: 70  ------SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                    ++F GGGTPSL+  + +   L+ +  +  +S   E+T EANP S     F 
Sbjct: 61  ERYHLPPADTVFVGGGTPSLVGAEGLTRALNAVRSSMGLSPGAEVTTEANPESTSPEFFS 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
           G R+AG  R+SLG+QS  E+ LR L R H     +AA   AR   F  ++ DLIY  P +
Sbjct: 121 GLREAGFTRVSLGMQSASEKVLRVLDRRHTPGRPVAAAQEARRAGFEHVNLDLIYGTPGE 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                +  +   LS  VDH+S Y L IE+GT  ++  + G+L+   E+     Y++    
Sbjct: 181 VDDDVKRSVDAVLSADVDHVSAYSLIIERGTAMFRKVRHGELIETDEDTLARRYDIIDDA 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            S  G   YE+SN S  G E  HNL YWR GD+ G GPGAH    +G+ R  +++ KHP 
Sbjct: 241 LSGQGFSWYEVSNWSRQGGECRHNLVYWRDGDWWGAGPGAHG--HIGNQRF-VNV-KHPA 296

Query: 303 SWLKMVRKNGHAVVEK--EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            +  M+  +  A+  K  E LS  ++ +E +M+ LRL EGI                C +
Sbjct: 297 RYSAMISGSEDALALKGVEDLSPSERHEERVMLALRLAEGIEESQLP-----ESTTSCVQ 351

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                G + R    R+  T RG  + D +I ++ V
Sbjct: 352 RFIDDGLLWRPSSGRVAVTNRGRLLADGIITDILV 386


>gi|332851893|ref|ZP_08433796.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013150]
 gi|332867952|ref|ZP_08437940.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013113]
 gi|332729678|gb|EGJ61014.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013150]
 gi|332733653|gb|EGJ64812.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013113]
          Length = 368

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/371 (35%), Positives = 207/371 (55%), Gaps = 14/371 (3%)

Query: 26  PFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           P+CV+KCPYCDFNSH V    +  E    ++++ + + +   +L   RSI S+F GGGTP
Sbjct: 2   PWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVELAQGRSIHSVFIGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SLI  +  A + + +        + EIT+EANP ++E + F GY +AG+NR+S+GVQ+  
Sbjct: 62  SLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGINRLSIGVQTFN 121

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   +L+ A+     
Sbjct: 122 TDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGAT 181

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G   YE+S      
Sbjct: 182 HISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFINYEVSAWR-KE 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HNLNYW++GDY+ IG GAH +V            + P+ +L  V    H  ++K  
Sbjct: 237 QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAE-HLQMKK-- 293

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQFSRLRCT 379
           + +++   EF+M  LRL +G+  + +E+  G +L D+       R   +      RL CT
Sbjct: 294 IEADELPFEFMMNALRLNDGVKAELYELRTGLSLNDLNDVLTSLRSRKLLVEDSGRLACT 353

Query: 380 QRGMTMLDSVI 390
           ++G   L+SV+
Sbjct: 354 EQGHIFLNSVL 364


>gi|256752138|ref|ZP_05493004.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748952|gb|EEU61990.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 375

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 206/370 (55%), Gaps = 11/370 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L E++     T   ++ S++ GG
Sbjct: 4   IGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALLMEIE--SNSTKDYNVVSVYIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+ +G+NR+S+G+Q
Sbjct: 61  GTPNLLPPSYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKGSGINRVSIGLQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + + + L+++GR H   E      L +  F  ++ DL+YALP QT  +W+  L+  +   
Sbjct: 121 AFQNRLLKYIGRIHTVEEFFGNYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVKLQ 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN + 
Sbjct: 181 PTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E  HN+ YW   +Y+G G GAHS +      V  S  ++ + ++K + +   AV EK
Sbjct: 241 PTFECRHNILYWECKNYLGFGAGAHSYMA----DVRYSNIENIKDYIKSILERKSAVKEK 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             L+ + +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q   ++G IE +    
Sbjct: 297 IKLTKQDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEIYKKVIQKYLKEGLIE-IDNEC 355

Query: 376 LRCTQRGMTM 385
           ++ T+RG+ +
Sbjct: 356 VKLTERGIDV 365


>gi|167037805|ref|YP_001665383.1| coproporphyrinogen III oxidase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|167040705|ref|YP_001663690.1| coproporphyrinogen III oxidase [Thermoanaerobacter sp. X514]
 gi|300914746|ref|ZP_07132062.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X561]
 gi|307724020|ref|YP_003903771.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X513]
 gi|320116224|ref|YP_004186383.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166854945|gb|ABY93354.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X514]
 gi|166856639|gb|ABY95047.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300889681|gb|EFK84827.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X561]
 gi|307581081|gb|ADN54480.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X513]
 gi|319929315|gb|ADV80000.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 375

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 205/371 (55%), Gaps = 11/371 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L E++     T   ++ S++ G
Sbjct: 3   EIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALLMEIE--SNSTKDYNVVSVYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+  G+NR+S+G+
Sbjct: 60  GGTPNLLPPSYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKDNGINRVSIGL 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ + + L+++GR H   E      L +  F  ++ DL+YALP QT  +W+  L+  +  
Sbjct: 120 QAFQNRLLKYIGRIHTVEEFFGNYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN +
Sbjct: 180 QPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HN+ YW   +Y+G G GAHS +      V  S  ++ + ++K + +   AV E
Sbjct: 240 LPTFECRHNILYWECKNYLGFGAGAHSYMA----DVRYSNIENIKDYIKSILERKSAVKE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           K  L+ + +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q   ++G IE +   
Sbjct: 296 KIKLTKQDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEIYKKVIQKYLKEGLIE-IDNE 354

Query: 375 RLRCTQRGMTM 385
            ++ T+RG+ +
Sbjct: 355 CVKLTERGIDV 365


>gi|149376951|ref|ZP_01894705.1| coproporphyrinogen III oxidase [Marinobacter algicola DG893]
 gi|149358728|gb|EDM47198.1| coproporphyrinogen III oxidase [Marinobacter algicola DG893]
          Length = 386

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 199/378 (52%), Gaps = 16/378 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CVKKCPYCDFNSH     + +  ++ + + ++         R I ++F G
Sbjct: 16  PLSLYVHVPWCVKKCPYCDFNSHALTGDIPENGYLDAIMEDLSGDLAFIQGRPIQTVFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P     + D +  + + + + EIT+EANP +VE   F G+R AG+NR+SLG+
Sbjct: 76  GGTPSLMSPDFYNTLFDRLRTHLSFTDDAEITLEANPGTVEQARFNGFRGAGINRLSLGI 135

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H+   A  AI  ARN  F   + DL++ LP QT      +LQ A+S
Sbjct: 136 QSFNPLRLKALGRIHDDKSAHRAIEAARNAGFDNFNLDLMHGLPDQTPADALDDLQAAMS 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLS YQLT+E  T FY         LP ++   ++Y+         G   YE+S  
Sbjct: 196 WQPPHLSWYQLTLEPNTEFYSRPPQ----LPDDDHLWEIYSQGADYLHQQGFTDYEVSAW 251

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           S  G  S HNLNYW +GDY+ +G GAH ++   +  +      + P++++  +   G   
Sbjct: 252 SRPGMASRHNLNYWMFGDYLALGAGAHGKITFRNGDIRRFWKTRQPDAYMNRI---GSRT 308

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQ 372
              + +  E++  EFLM  LRL  G+    +    G  L    ++ E  L+++  +E   
Sbjct: 309 AGSQMVELEERPLEFLMNALRLTSGVPENLFTERTGLPLSRVAVKLEE-LRKENMLEP-- 365

Query: 373 FSRLRCTQRGMTMLDSVI 390
             R++ T+ G   L+S++
Sbjct: 366 -GRIQTTELGQRYLNSLL 382


>gi|77361524|ref|YP_341099.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76876435|emb|CAI87657.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 378

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 184/340 (54%), Gaps = 10/340 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH ++ ++ +  ++Q  + +++    L   R I SIF G
Sbjct: 5   PLSLYVHVPWCVQKCPYCDFNSHGQKGEIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +L  +     +  N EIT+EANP +VE   F+ Y KAG+NRIS+GV
Sbjct: 65  GGTPSLLTGAAYTRLLSEVKSLIGLEDNCEITLEANPGTVETGRFKDYVKAGINRISIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS++   L+ LGR H + EA  A   A+       + DL++ LP QT+     +L++ ++
Sbjct: 125 QSMQNDKLKALGRIHGSDEANYAAEQAKEAGLNSFNLDLMHGLPGQTLDDALGDLKQIIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T F          LP +    D+    Q + +  G   YEIS +
Sbjct: 185 LNPPHISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGQELLAQAGYLQYEISGY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDYIGIG GAH +V   +  +    E  KHP  ++ +++     
Sbjct: 241 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTDANTGIITRTEKVKHPRGYMDLIKP---Y 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           + +   +  +  A EF M   RL E   + D+  L  + L
Sbjct: 298 LFKSWQVEQDDLAFEFFMNRFRLVEPCPINDFNALTQQPL 337


>gi|150010330|ref|YP_001305073.1| coproporphyrinogen III oxidase [Parabacteroides distasonis ATCC
           8503]
 gi|149938754|gb|ABR45451.1| coproporphyrinogen III oxidase [Parabacteroides distasonis ATCC
           8503]
          Length = 385

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 206/382 (53%), Gaps = 20/382 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC K+C YCDF S+   +YK   E +I + + EM+  +   G  ++ +I+FGG
Sbjct: 13  GLYIHVPFCAKRCLYCDFFSNTEMKYK---EPYINALIKEMELRKGYIGNEALETIYFGG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ ++   I + I + + V+   EIT+EANP  ++       R    NR+S+GVQ
Sbjct: 70  GTPSQLDEKDFGKIFEAIYRLFDVAEQAEITLEANPDDMKREYVSLLRNYPFNRVSMGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+  
Sbjct: 130 SFHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTKQAWEENLRQAIRL 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
            V HLS Y L  E+GT  YK+ + G +    E ++V  ++ L   +  A  LH YEISN 
Sbjct: 190 DVPHLSAYHLIYEEGTALYKLMEAGKVTPVDEELSVSFFSTLIDRLAEAGYLH-YEISNF 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KNGHA 314
           +  G  S HN +YW    Y+G+GP AHS          I  E +P S    +   +NGH 
Sbjct: 249 ARPGFFSKHNSSYWTGKKYLGLGPSAHS-------YNGIDREWNPSSLPIYIEGIENGHP 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
            +E E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + + 
Sbjct: 302 TIESEDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT 361

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              +L  ++ G+ + D ++++L
Sbjct: 362 G-DKLILSKSGIFVSDGIMSDL 382


>gi|255012406|ref|ZP_05284532.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_7]
          Length = 375

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 206/382 (53%), Gaps = 20/382 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC K+C YCDF S+   +YK   E +I + + EM+  +   G  ++ +I+FGG
Sbjct: 3   GLYIHVPFCAKRCLYCDFFSNTEMKYK---EPYINALIKEMELRKGYIGNEALETIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ ++   I + I + + V+   EIT+EANP  ++       R    NR+S+GVQ
Sbjct: 60  GTPSQLDEKDFGKIFEAIYRLFDVAEQAEITLEANPDDMKREYVSLLRNYPFNRVSMGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+  
Sbjct: 120 SFHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTKQAWEENLRQAIRL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
            V HLS Y L  E+GT  YK+ + G +    E ++V  ++ L   +  A  LH YEISN 
Sbjct: 180 DVPHLSAYHLIYEEGTALYKLMEAGKVTPVDEELSVSFFSTLIDRLAEAGYLH-YEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KNGHA 314
           +  G  S HN +YW    Y+G+GP AHS          I  E +P S    +   +NGH 
Sbjct: 239 ARPGFFSKHNSSYWTGKKYLGLGPSAHS-------YNGIDREWNPSSLPIYIEGIENGHP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
            +E E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + + 
Sbjct: 292 TIESEDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT 351

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              +L  ++ G+ + D ++++L
Sbjct: 352 G-DKLILSKSGIFVSDGIMSDL 372


>gi|38234293|ref|NP_940060.1| coproporphyrinogen III oxidase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38200556|emb|CAE50251.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium diphtheriae]
          Length = 377

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 202/388 (52%), Gaps = 22/388 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSIS 72
           S+S GVYVH PFC  +C YCDFN++      G    E+++ +   E++        R  +
Sbjct: 2   SDSFGVYVHVPFCSSRCGYCDFNTYTPGELGGTASPESYLDALEKELELAAASGTTRPAT 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS++    +  +L  +     ++   E+T E+NP +     F     AG NR
Sbjct: 62  TVFIGGGTPSMLGASGLTRVLSAVRNTIGIAPGAEVTTESNPETTSPEFFSELLDAGYNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLG+QS     LR L R H    A  A   A N  F  ++ D+IY  P +T     + L
Sbjct: 122 ISLGMQSASSSVLRVLERKHTPGRAFDAALEAMNAGFLHVNLDMIYGTPTETDDDVRLTL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +RAL   VDH+S Y L +E GT +  K+HK G L  P+E+V  D Y L  +   A G   
Sbjct: 182 ERALDTGVDHISAYSLIVEDGTAMARKVHK-GQLPPPNEDVYADRYGLIDTALRAQGFDW 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G E  HNL YW  GD+ G GPGAHS +   + R   ++ KHP ++ + +  
Sbjct: 241 YEVSNWAKPGGECQHNLGYWLDGDWWGAGPGAHSHI---ASRRFFNV-KHPSTYAQHLAD 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--GF- 367
               + E+E L S ++ +E +M+GLRLR+G+ +  +          E ER +  +  G  
Sbjct: 297 GQLPIKEEELLDSTERHEESVMLGLRLRQGLELSRF---------TEAERAVIEKYVGLK 347

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +  +   R+  T +G  ++D +IA++ V
Sbjct: 348 LLHIYDGRVASTLQGRLLIDGIIADILV 375


>gi|311743002|ref|ZP_07716810.1| coproporphyrinogen III oxidase [Aeromicrobium marinum DSM 15272]
 gi|311313682|gb|EFQ83591.1| coproporphyrinogen III oxidase [Aeromicrobium marinum DSM 15272]
          Length = 402

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 200/379 (52%), Gaps = 22/379 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGPRSISS 73
           + GVYVH PFC  +C YCDFN++    ++G+     ++  + + E++     TGPR IS+
Sbjct: 35  AFGVYVHIPFCTVRCGYCDFNTYTAD-ELGEGATRASYADTAIAEIRRAAATTGPREIST 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP+ +   ++  +L  I + W ++ +VE+T EANP SV+    Q  R  G NRI
Sbjct: 94  VFFGGGTPTQLPAADLVRVLRAIDEAWGLADDVEVTTEANPDSVDPQALQTLRAGGFNRI 153

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS     L  L R H+ +    A+  AR   F ++S DLIY  P +++  W   L 
Sbjct: 154 SFGVQSAVPHVLAVLDRTHDPARVPDAVRWARAAGFEQVSVDLIYGSPTESVDDWRRTLD 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+  A DH+S Y L +E+GT F +    G+LV+P ++   D Y L   +  A GL  YE
Sbjct: 214 HAVDLAPDHVSAYALIVERGTAFARRVARGELVMPDDDETADKYLLADDVLGAAGLSWYE 273

Query: 253 ISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           +SN +    A   HN  YW  G++ GIGPGAHS ++ G     +   KHP ++ + +   
Sbjct: 274 LSNWALDDAARCRHNELYWNGGEWWGIGPGAHSFLQ-GRRWWNV---KHPAAYAQRLAAG 329

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
                  E + ++    E +M+ +RLREGI+    + L G +        L R   +ER 
Sbjct: 330 ETVEAGSEAIDADTARLEDVMLRMRLREGIAA---DGLIGVD-------QLVRDDLLER- 378

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q  R+  T  G  + D VI
Sbjct: 379 QGDRVTLTLTGRLLADHVI 397


>gi|162452119|ref|YP_001614486.1| coproporphyrinogen oxidase [Sorangium cellulosum 'So ce 56']
 gi|50403842|gb|AAT76674.1| HemN [Sorangium cellulosum]
 gi|161162701|emb|CAN94006.1| Coproporphyrinogen oxidase [Sorangium cellulosum 'So ce 56']
          Length = 415

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 192/354 (54%), Gaps = 30/354 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           VYVH+P+C+KKCPYCDF S  + R  +    +  + L E++   ++ G R + SIFFGGG
Sbjct: 9   VYVHFPWCLKKCPYCDFVSFAKAREAIDHRGYADAVLAELRKREEVLGERELRSIFFGGG 68

Query: 80  TPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TPSL EP  +  +L  + A     S ++E+T+E NP+S++    + +R  GVNR+S+GVQ
Sbjct: 69  TPSLWEPDEMGRVLSAVTAAAGRRSPDLEVTVECNPTSLDEQRARAFRAIGVNRLSVGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALP--------KQTMTQWEM 189
            L+ + LRFLGR H+    + A+  A R+  PR+S DLIY +         +Q   Q   
Sbjct: 129 GLDVERLRFLGRLHDPDGGLGALSAALRSGMPRVSGDLIYGVAVGTVEAAREQRPEQAAA 188

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           E +   S  V H+S Y LT+E GT F ++ + G L L  ++   D +        A GL 
Sbjct: 189 EARAVASTGVTHISAYSLTVEPGTSFGELARRGRLPLAGDDGVADTFFAIDEALEAEGLA 248

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI---SIEKH------ 300
            YE+SN++  G E+ HNL YW+  DYIG+G  A+  V     R  +     E H      
Sbjct: 249 HYEVSNYARPGDEARHNLGYWQGIDYIGLGCAAYGTVSRPDPRWGLRSAGAEGHDGEASA 308

Query: 301 --------PESWLKMVRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVK 344
                   PE ++  + + G A+    +E L+ E +  E +M+GLRLREG+ ++
Sbjct: 309 VRYRNIVSPERYMAAMAEGGEAIAVESEERLAPETRLSERIMLGLRLREGLDLE 362


>gi|220929399|ref|YP_002506308.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulolyticum H10]
 gi|219999727|gb|ACL76328.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulolyticum H10]
          Length = 380

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 193/336 (57%), Gaps = 6/336 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDFNS+  +     +N+ +S   E++  +       I++IF GGG
Sbjct: 8   GLYIHVPFCSSKCNYCDFNSYTGKIDHA-DNYFKSLKKEIELYKAELRHYIINTIFIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q I  IL+     + +S N EI+IE+NP ++     + Y+ AG+NRIS+G+Q+
Sbjct: 67  TPSVVNEQYILEILEKCRTEYNISENCEISIESNPGTLSNEKLKAYKNAGINRISIGLQA 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L++LGR H+  +   ++  A++  F  ++ D+I+ +P Q++  W+  L   +S  
Sbjct: 127 YQDKLLKYLGRCHSHKDFTESVKNAKSAGFENINGDIIFGIPGQSLGDWKETLDYLVSLG 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L IE+ T F +M + G LV   + +  ++Y+      + +GL  YEISN + 
Sbjct: 187 INHISAYSLKIEEETKFGRMEEQGSLVPVEDELDREMYHYAVDYLNENGLKQYEISNFAK 246

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW+  DY+G+G GAHS +K       ISI    E ++  + +    + EK
Sbjct: 247 EGYECKHNLIYWKCVDYLGLGAGAHSCLKNTRFSNQISI----EGYIDYLNRGEKPLYEK 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             L    +  E++ +GLRL  G+S K++  L  RN+
Sbjct: 303 NPLEFTDKMSEYMFLGLRLTAGVSGKEFYELFNRNM 338


>gi|268316499|ref|YP_003290218.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
 gi|262334033|gb|ACY47830.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
          Length = 383

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 209/389 (53%), Gaps = 24/389 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGP-RSISSIF 75
           G+Y+H PFC ++C YCDF      +  GQ     F+Q+  TE+++  QL G    I +I+
Sbjct: 3   GIYLHIPFCKQRCIYCDFY-----FVTGQRLHPTFVQALCTEIEYYGQLYGRLEPIETIY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +  + +A +L+ + + + +S+  E+T E NP     +   G    G+NR+S+
Sbjct: 58  FGGGTPSRLSLEEVARVLNELYRYFDLSALQEVTFEVNPEDASRDYLSGLHSLGINRLSI 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  E  LRF+ R H A +A AAI  AR   F   + DLI+ LP Q +  W   LQ+ 
Sbjct: 118 GVQSFYEADLRFMNRAHTAEQAEAAIENARRAGFENFNVDLIFGLPDQPLEYWMANLQKV 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y LTIE  T+ YK  + G +    E      Y+       A G   YEIS
Sbjct: 178 ADRDIPHVSTYSLTIEPRTVLYKQVERGLVQPADEETYRACYDFAMEYLEARGYEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----RVKVGSHRVAISIEKHPESWLKMVR 309
           N +  G +S HN  YWR+G+Y+G GP AHS       + G++R A    ++   +  ++ 
Sbjct: 238 NFARPGYQSRHNHTYWRHGNYLGFGPSAHSFWWGQLPEPGAYRWANV--RNLRRYEALLA 295

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-----NLQR 364
           ++   +  +E LS +Q A+E+L + LR  EG+ +  +    G  +D+  ER      L+ 
Sbjct: 296 QHHLPLEFREGLSYDQLAEEYLYLRLRTAEGLDLDHYAERYG--VDLLSERLDELAELEA 353

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +G IE ++  +LR +++G  + D+++A L
Sbjct: 354 EGLIEPIRNGKLRLSRKGRHVCDAIVARL 382


>gi|75908440|ref|YP_322736.1| coproporphyrinogen III oxidase [Anabaena variabilis ATCC 29413]
 gi|75702165|gb|ABA21841.1| coproporphyrinogen III oxidase, anaerobic [Anabaena variabilis ATCC
           29413]
          Length = 396

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/383 (35%), Positives = 202/383 (52%), Gaps = 16/383 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHV------RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           YVH PFC ++C YCDF   V          V    ++ +   E+        P  + +IF
Sbjct: 14  YVHIPFCRRRCFYCDFPIFVVGDRQRGETSVTISGYVDTLCEEIAITPVFGQP--LQTIF 71

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+    +A IL  + K + +  + EI++E +P + ++ + QGYR  GVNR+SL
Sbjct: 72  FGGGTPSLLSTAQLAQILGTLDKRFGIVPDAEISMEIDPGTFDLAHIQGYRSVGVNRVSL 131

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +E+ L+  GR+H+  +  AAI L   +  P  S DLI  LP Q++ QW+  L+ A
Sbjct: 132 GVQAFQEELLKLAGRSHSLKDIFAAIDLIHQVEIPEFSIDLISGLPHQSLDQWQDSLETA 191

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++ A  H+S+Y LTIE GT F + +K GD  LP++   V +Y + Q I +  G   YEIS
Sbjct: 192 VNIAPTHISIYDLTIEPGTAFGRYYKPGDNPLPTDETTVKMYQMGQRILTDGGYEHYEIS 251

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G +  HN  YW    Y G G GA S V+ G         K    W++ +  N H 
Sbjct: 252 NYAKPGHQCRHNRVYWENCPYYGFGMGAASYVE-GKRFTRPRKTKEYSQWVQELIAN-HG 309

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           V++ E         E LM+GLRL +G+S+       G+    E  + LQ    QG+++ V
Sbjct: 310 VIDWEITPKADVLLETLMLGLRLADGVSLAALTEEFGKEKIQELHQCLQPYFTQGWVQVV 369

Query: 372 QFSRLRCTQ-RGMTMLDSVIANL 393
              RLR +   G    + V+A+L
Sbjct: 370 G-DRLRLSDPDGFLFSNVVLADL 391


>gi|323483787|ref|ZP_08089166.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
 gi|323402872|gb|EGA95191.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
          Length = 408

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 201/359 (55%), Gaps = 17/359 (4%)

Query: 9   NNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM---- 62
           NN  G   N+  L +Y+H PFCVKKC YCDF S     +V ++ +++  + E++      
Sbjct: 9   NNQAGTMENNTPLELYIHIPFCVKKCLYCDFLSFAAD-EVTRKKYVEQLIKEIETCGTRI 67

Query: 63  --RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             R       + S+F GGGTPS + P+ I  +++ + +N+ +  + EITIEANP +++  
Sbjct: 68  TGRDADAAFPVISVFIGGGTPSSLCPEQICAVMNAVKENFRLLPDAEITIEANPGTLDNK 127

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             + Y+ +G+NR+SLG+QS     LR LGR H+ +E + +  LAR   F  ++ DL+ AL
Sbjct: 128 KLRAYKNSGINRLSLGLQSANPGELRELGRIHSWNEFLESYRLAREAGFDNINVDLMSAL 187

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q+   +   L+       +H+S Y L IE+GT FY  +     VLP E     +Y+ T
Sbjct: 188 PGQSFESYADTLECVALLEPEHISAYSLIIEEGTPFYDKYSGRAEVLPDEEEDRRMYHHT 247

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +   +  G H YE+SN++  G E +HN+ YW  G Y+GIG GA S ++    R ++  E 
Sbjct: 248 KEYLAEKGYHRYEVSNYARPGRECIHNVGYWTGGSYLGIGLGASSLME--GQRFSVIREM 305

Query: 300 HPESWLKMVRK---NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   +L + R+    G     +E L+ + + +EF+ +GLRL EGI+ KD++   G N++
Sbjct: 306 N--DYLDLSREELAEGRQYENREILTEQDEMEEFMFLGLRLTEGIAAKDFKKRFGLNIE 362


>gi|295695857|ref|YP_003589095.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus tusciae
           DSM 2912]
 gi|295411459|gb|ADG05951.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus tusciae
           DSM 2912]
          Length = 387

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 213/379 (56%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC +KC YCDFN++V + +V  E F+Q+ + E++ + +L     + +++ GGG
Sbjct: 8   ALYLHVPFCARKCYYCDFNTYVAKPEV-WERFVQALVREIRALGRLYPDTVLETVYAGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +    I + +  ++ ++S+ EI++EANP +V+    Q  R+ GVNR+S+G QS
Sbjct: 67  TPSLLSCRQWQQIFEALRGSFHLASDAEISLEANPGTVDCEKLQVLRELGVNRLSIGAQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LR LGR+H     + ++ LAR++    ++ DL++ +P QTM  W   L  A+   
Sbjct: 127 FNRELLRKLGRSHGPEAIVHSVELARSVGGFSLNLDLMFGIPGQTMEDWRQSLAAAVELG 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y L +E+GT + + +  G L LPSE++   +Y          G   YEISN + 
Sbjct: 187 PDHLSAYGLKVEEGTPYSRWYDQGVLDLPSEDLEAKMYTALMEFMDKTGYEQYEISNFAR 246

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA   HNL YW    Y+ +GPGAH  V  G   V +   ++   ++++  +    V E+
Sbjct: 247 PGARCRHNLVYWNNEPYLAVGPGAHGYVD-GVRYVVV---RNVPVYMELAWEGSSTVEER 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DI---ECERNLQRQGFIERVQFS 374
             +S E++ ++ +++GLRL EG+    +    GR+L D+     ER L R G + + + S
Sbjct: 303 HEVSDEEEMEDTMILGLRLLEGVGDDRFAQRHGRSLFDVFSEPVERYL-RSGLLVQ-EGS 360

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R+R  +  + + + V+ + 
Sbjct: 361 RVRLAREALWISNEVLQSF 379


>gi|312793767|ref|YP_004026690.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180907|gb|ADQ41077.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 375

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 212/382 (55%), Gaps = 24/382 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSI 74
           ++G+Y+H PFC KKC YCDF S    Y+   ++ + ++ + ++      +      I +I
Sbjct: 3   NIGLYIHVPFCKKKCYYCDFVS----YENVDDDMVFAYFSALENELIFYKENYEIEIDTI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +  + I  +L+ I  N+ V S  EI+IEANP S+     + YR+AG+NR+S
Sbjct: 59  YIGGGTPSFVPAKYILKLLEFIYSNFKVKSTCEISIEANPESITKEKLKCYREAGINRLS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QSL +  LR +GR H++  A+  +      F   S D+I  LP QT   +   L   
Sbjct: 119 VGIQSLNDAELRAIGRIHDSEVALKILSRVPLYFENFSVDVIIGLPYQTFESFSQTLNTL 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L ++  HLS+Y L IE+GT  ++ +++   +LPSE+    ++   +   S  GL+ YEIS
Sbjct: 179 LKFSPPHLSIYSLKIEEGTPLFERYEEYKSLLPSEDEERRMFWWARDRLSEVGLYHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YW   +YIG+G  AHS  +   +    +I+++       +++NG A
Sbjct: 239 NFAKKGFECKHNLKYWNCDEYIGVGCAAHSFFEDCRYYNTSNIKEYTNK----IKENGLA 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF- 373
           V  KE +SSE+   EF+++GLR  EG S+ ++    G    IE ER  + Q  IE+++  
Sbjct: 295 VEGKELISSEESEKEFIILGLRKIEGFSLDEFRERFG----IEFERKYKSQ--IEKLKKY 348

Query: 374 ------SRLRCTQRGMTMLDSV 389
                  R++ T+RG+ + + V
Sbjct: 349 GLIDINGRIKLTERGIDLANLV 370


>gi|154482570|ref|ZP_02025018.1| hypothetical protein EUBVEN_00237 [Eubacterium ventriosum ATCC
           27560]
 gi|149736595|gb|EDM52481.1| hypothetical protein EUBVEN_00237 [Eubacterium ventriosum ATCC
           27560]
          Length = 404

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 197/359 (54%), Gaps = 24/359 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N L +Y+H PFCVKKC YCDF S     +  +E ++++ + E++  +       + ++F 
Sbjct: 2   NGLEIYIHIPFCVKKCDYCDFLSAPADLET-KEKYVEALINEIKLSKNKMSEYVVDTVFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+E   I+ I+  +  N  +S N EITIE NP ++  +    Y+K+G+NRIS G
Sbjct: 61  GGGTPSLLEENQISKIMSVLRDNCNMSENPEITIECNPGTITESKLWEYKKSGINRISFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  ++ L+ +GR HN +  + + +LAR   F  ++ DL+ ALP QT+  +E  L + +
Sbjct: 121 LQSANDEELKSIGRIHNYAGFLESYNLARKCGFDNINVDLMSALPGQTLKSYEETLNKVV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL----VLPSENVAVDLYNLTQSITSAHGLHAY 251
               +H+S Y L +E+ TL Y   K   +    +LP E     +Y LT +I  ++G   Y
Sbjct: 181 RLEPEHISAYSLIVEENTLMYDRVKKAQIKGINILPDEESERKMYYLTNNILRSNGYRKY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN+S  G E  HN+ YW+  +Y+G G GA S  K   +     I K+ E     +++N
Sbjct: 241 EISNYSKPGKECKHNIGYWQRKEYLGFGIGAASLYKENRYNNISDINKYIEVLTNNIKEN 300

Query: 312 G-----------------HAVVEK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                             +++V+  + L+   + +EF+ +GLR+ EG+S++ +E   G+
Sbjct: 301 SINNVGNSSEVENQVNILNSIVKNLQQLTERDRMEEFMFLGLRMMEGVSMEKFERYFGK 359


>gi|326389867|ref|ZP_08211431.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325994135|gb|EGD52563.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 375

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 206/371 (55%), Gaps = 11/371 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L E++     T   ++ S++ G
Sbjct: 3   EIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALLMEIE--SNSTKDYNVVSVYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+  G+NR+S+G+
Sbjct: 60  GGTPNLLPPFYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKDNGINRVSIGL 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ + + L+++GR H   +      L +  F  ++ DL+YALP QT  +W+  L+  +  
Sbjct: 120 QAFQNRLLKYIGRIHTIEDFFGNYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN +
Sbjct: 180 QPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HN+ YW   +Y+G G GAHS ++     V  S  ++ + ++K + +   AV E
Sbjct: 240 LPTFECRHNILYWECKNYLGFGAGAHSYME----GVRYSNIENIKDYIKSILERKSAVKE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
           K  L+ E +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q+   +G IE +   
Sbjct: 296 KIKLAKEDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEFYKKVIQKYLNEGLIE-IDNE 354

Query: 375 RLRCTQRGMTM 385
            ++ T+RG+ +
Sbjct: 355 CVKLTERGIDV 365


>gi|121997762|ref|YP_001002549.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Halorhodospira halophila SL1]
 gi|121589167|gb|ABM61747.1| coproporphyrinogen III oxidase, anaerobic [Halorhodospira halophila
           SL1]
          Length = 408

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 187/327 (57%), Gaps = 10/327 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VY+H P+C+++C YCDFN+H  R ++    ++ +   E++        R ++S+F GG
Sbjct: 12  LAVYIHLPWCLQRCGYCDFNAHALRGELPARAYVDALGRELRRQAPAALGRRVTSVFIGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL  P  I  +LD +     + S  EIT+EANP + E    +G+R+AGV R+SLGVQ
Sbjct: 72  GTPSLFPPGPIGELLDTLDAVLGLESGAEITLEANPGASENARLRGFRQAGVTRLSLGVQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++  L  LGR H+A  A  A+  A  + F  ++ D++Y LP Q +T  E ++   ++ 
Sbjct: 132 SLDDTLLARLGRIHDAVAAREAVAEAYAVGFRGINADVMYGLPGQGVTGAEADVAGVIAL 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DH+S YQLTIE  T F +    G   LP E   +++  + +   +  GL  YE+S  +
Sbjct: 192 GADHVSHYQLTIEPETPFGRRPPPG---LPDEETVLEMEAVCRQRLAQAGLERYEVSAFA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHAVV 316
             G  S+HNL YW +GDY+G+G GA  +      RV  + ++  P +W+  V   G A V
Sbjct: 249 RPGQRSVHNLGYWTFGDYLGLGAGAAGKRTGADGRVLRTRQRRSPRAWMAAV---GSARV 305

Query: 317 EKEF--LSSEQQADEFLMMGLRLREGI 341
           E E   L+  +QA E L+ GLRLREG+
Sbjct: 306 EAECIELTPSEQAFEVLLNGLRLREGL 332


>gi|296133947|ref|YP_003641194.1| oxygen-independent coproporphyrinogen III oxidase [Thermincola sp.
           JR]
 gi|296032525|gb|ADG83293.1| oxygen-independent coproporphyrinogen III oxidase [Thermincola
           potens JR]
          Length = 378

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 205/383 (53%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQ-WMRQLTGP-RSISSI 74
           ++G+Y+H PFCVKKC YCDF S+   Y  G   +++ + L E++ + +QL+G  + ++S+
Sbjct: 2   AIGLYIHVPFCVKKCNYCDFISYP--YDAGLTASYVSALLKEIELYGQQLSGKDKELASV 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+    +  +   +   +      E+T+EANP +++      ++  G NR+S
Sbjct: 60  YIGGGTPSLLSVPQLEAVFGNLGSFFDYVPGAEVTVEANPGTLDREKLNNWKAFGCNRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS+ +  LRFLGR H A EA  A +LAR   F  ++ DLI+ +P Q M  W   L+R
Sbjct: 120 IGIQSMNDSLLRFLGRIHRADEAAHAFYLAREAGFDNINIDLIFGIPGQGMHDWSDTLRR 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    +H+S Y L IE+GT   ++  +G L    E++ V++Y  T     A G   YEI
Sbjct: 180 VLELGPEHISAYGLKIEEGTPLARLQAEGQLPPGDEDLEVEMYFHTIDTLRAAGYEHYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G  S HNL YW   +Y+G+GP AHS +    H    S       +   +     
Sbjct: 240 SNFCRPGKASAHNLRYWANKEYLGLGPAAHSYL----HGERFSNRPGLNEYCTALNDGLL 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIER 370
            V E+  +    +  E + +GLRL  G+++KD+    G++++         L+R G +E+
Sbjct: 296 PVAERNPVDRHGEISETIFLGLRLINGLNLKDFRQRFGQSIEELFPAALDKLERLGLVEK 355

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
                LR T++G+ + + V A  
Sbjct: 356 RDVF-LRLTRKGLPLANEVFAEF 377


>gi|255282398|ref|ZP_05346953.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bryantella formatexigens DSM 14469]
 gi|255266982|gb|EET60187.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bryantella formatexigens DSM 14469]
          Length = 382

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 214/389 (55%), Gaps = 26/389 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           L +Y+H PFCV+KC YCDF S     +  Q  +I+  L E++ W  Q  G   IS++FFG
Sbjct: 4   LQIYIHIPFCVRKCAYCDFLSFAADQET-QRAYIRMLLREIEAW--QDRGDEVISTVFFG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++  + I L+++ + K ++ + + EIT+E NP ++       YR+AG+NR+S+G+
Sbjct: 61  GGTPSVLPAEEITLVMEALKKKFSFAGDAEITLECNPGTLTAEGLSRYRRAGINRLSIGL 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ LR LGR H   E   +  LAR   F  ++ DL+ ALP Q+   W   L++ L+
Sbjct: 121 QSAQDKELRLLGRIHTWEEFEESYRLARAAGFANINVDLMSALPGQSPAAWRDTLEKVLA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD-------GDL--VLPSENVAVDLYNLTQSITSAHG 247
            A +H+S Y L IE+GT FY+ +++       G++  +LPSE    ++Y +T+ +    G
Sbjct: 181 LAPEHISAYSLIIEEGTPFYERYREDAQRRERGEVCRILPSEEEEREMYWMTEKLLKERG 240

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN++  G    HN  YW   +Y+G G GA S +         S++++ +     
Sbjct: 241 YERYEISNYAQPGFACRHNCGYWERREYLGFGLGAASLMDHTRFADTASLQQYLDG---- 296

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQR 364
            R  G     +  L+  ++ +E + +GLRLR G+S   +    G  ++    E  + L+R
Sbjct: 297 -RWRGET---QGRLTRAEEMEETMFLGLRLRRGVSFAHFYRTFGVTMEEIYGEVLQRLER 352

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           Q  +ER +  R+  T+RG  + + V A  
Sbjct: 353 QRLLERTE-ERIFLTKRGTDISNYVCAEF 380


>gi|307266438|ref|ZP_07547974.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918546|gb|EFN48784.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 375

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 205/371 (55%), Gaps = 11/371 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L E++     T   ++ S++ G
Sbjct: 3   EIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALLMEIE--SNSTKDYNVVSVYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+  G+NR+S+G+
Sbjct: 60  GGTPNLLPPSYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKDNGINRVSIGL 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ + + L+++GR H   +      L +  F  ++ DL+YALP QT  +W+  L+  +  
Sbjct: 120 QAFQNRLLKYIGRIHTIEDFFENYELVKKFFGNINIDLMYALPTQTFKEWQETLKEVVKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN +
Sbjct: 180 QPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HN+ YW   +Y+G G GAHS ++     V  S  ++ + ++K + +   AV E
Sbjct: 240 LPTFECRHNILYWECKNYLGFGAGAHSYME----DVRYSNIENIKDYIKSILERKSAVKE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
           K  L+ E +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q+   +G IE +   
Sbjct: 296 KIKLAKEDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEFYKKVIQKYLNEGLIE-IDNE 354

Query: 375 RLRCTQRGMTM 385
             + T+RG+ +
Sbjct: 355 CAKLTERGIDV 365


>gi|126700081|ref|YP_001088978.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile 630]
 gi|115251518|emb|CAJ69351.1| Oxygen-independent coproporphyrinogen-III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Clostridium
           difficile]
          Length = 391

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 207/390 (53%), Gaps = 25/390 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV------RRY----KVGQENFIQSFLTEMQWMRQ---- 64
           LG+YVH PFCVKKC YCDFNS+       +RY    K+  E +      + ++  +    
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDSKKRYIEDLKIEMELYSNKLYKDNKYKNKECCS 61

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   + 
Sbjct: 62  LNKNDKITSIFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLEKLKT 121

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            ++ G+NR+S+G+Q+++E+ L F+GR H   E       A ++ F  ++ DL+Y+LP QT
Sbjct: 122 MKEIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINIDLMYSLPNQT 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W+  L++ +     H+S Y L +E+GT  Y M++     L  ENV +++Y  T +  
Sbjct: 182 LCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENVDIEMYEYTINYL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S+E +  S
Sbjct: 242 KSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGASGYINENRYNNVESLEDYHLS 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
            +K  +     + E E LS +   +E + MGLR+ +GI  +D++   G  +D   + N Q
Sbjct: 302 LVKREK----PIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFG--IDFREKYNKQ 355

Query: 364 RQGFIERV----QFSRLRCTQRGMTMLDSV 389
            +  + R      F  ++ TQ+G  + +SV
Sbjct: 356 IEMLLARKLINQSFEGIQLTQKGREISNSV 385


>gi|255101625|ref|ZP_05330602.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-63q42]
 gi|255307494|ref|ZP_05351665.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile ATCC 43255]
          Length = 391

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 207/390 (53%), Gaps = 25/390 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV------RRY----KVGQENFIQSFLTEMQWMRQ---- 64
           LG+YVH PFCVKKC YCDFNS+       +RY    K+  E +      + ++  +    
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDSKKRYIEDLKIEMELYSNKLYKDNKYKNKECCS 61

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   + 
Sbjct: 62  LNKNDKITSIFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLEKLKT 121

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            ++ G+NR+S+G+Q+++E+ L F+GR H   E       A ++ F  ++ DL+Y+LP QT
Sbjct: 122 MKEIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINVDLMYSLPNQT 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W+  L++ +     H+S Y L +E+GT  Y M++     L  ENV +++Y  T +  
Sbjct: 182 LCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENVDIEMYEYTINYL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S+E +  S
Sbjct: 242 KSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGASGYINENRYNNVESLEDYHLS 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
            +K  +     + E E LS +   +E + MGLR+ +GI  +D++   G  +D   + N Q
Sbjct: 302 LVKREK----PIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFG--IDFREKYNKQ 355

Query: 364 RQGFIERV----QFSRLRCTQRGMTMLDSV 389
            +  + R      F  ++ TQ+G  + +SV
Sbjct: 356 IEMLLARKLINQSFEGIQLTQKGREISNSV 385


>gi|302869302|ref|YP_003837939.1| oxygen-independent coproporphyrinogen III oxidase [Micromonospora
           aurantiaca ATCC 27029]
 gi|302572161|gb|ADL48363.1| oxygen-independent coproporphyrinogen III oxidase [Micromonospora
           aurantiaca ATCC 27029]
          Length = 409

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 204/391 (52%), Gaps = 23/391 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG---P 68
           G+   GVYVH PFC  +C YCDFN++      G   +E +  S L E+    ++ G   P
Sbjct: 28  GARGFGVYVHVPFCASRCGYCDFNTYTASELGGGASRETYADSVLAELALAARVLGDSPP 87

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   + +  R A
Sbjct: 88  PRVDTVFVGGGTPTLLPADDLARILDGIDRVWGLAADAEVTTEANPESVSPESLKTLRAA 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RISLG+QS     L  L R H+A  A AA   AR+  F  ++ DLIY  P +T   +
Sbjct: 148 GYTRISLGMQSAAPGVLAVLDRRHSAGRATAAALEARDAGFEHVNLDLIYGTPGETADDF 207

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L + +   VDH+S Y L +E GT      + G+L  PS++VA D Y   ++     G
Sbjct: 208 AASLAQVVDAGVDHVSAYALIVEDGTRLAARMRRGELPYPSDDVAADRYLAAEAALGEAG 267

Query: 248 LHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
              YE+SN +   A +  HNL YW   D+ G+GPGAHS V      V     KHP ++  
Sbjct: 268 FSWYEVSNWARSAAAACRHNLLYWTGADWWGLGPGAHSHVG----GVRWWNVKHPSAYAA 323

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG--ISVKDWEMLAGRNLDIECERNLQR 364
            + +     + +E L+ ++Q  E +M+ +RL  G  + V D    AG       ER  + 
Sbjct: 324 RLAEGASPALAREQLTPDEQHMEDVMLRVRLASGLPLDVLDEPGRAG------AERA-RD 376

Query: 365 QGFIERVQFSR--LRCTQRGMTMLDSVIANL 393
            G ++   ++R  +  T RG  + D+V+ +L
Sbjct: 377 AGLLDAGAYARGLVVLTLRGRLLADAVVRDL 407


>gi|88811940|ref|ZP_01127193.1| coproporphyrinogen III oxidase [Nitrococcus mobilis Nb-231]
 gi|88790824|gb|EAR21938.1| coproporphyrinogen III oxidase [Nitrococcus mobilis Nb-231]
          Length = 369

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 197/370 (53%), Gaps = 16/370 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  R ++    ++ + L ++    +    R ISS+FFGGGTPSL  P  
Sbjct: 1   MRKCPYCDFNSHALRGELPATAYVDALLADVLREIKHIHEREISSVFFGGGTPSLFPPAA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +A +L+G+ +   ++++ EIT+EANP SV+   F+ +R AGVNR+S+GVQS +  SL  L
Sbjct: 61  LARLLEGLQRYLRIAADCEITLEANPGSVDQARFEDFRSAGVNRLSIGVQSFQADSLHRL 120

Query: 149 GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H    A+AA+  A    F   + DL+Y LP Q       ++ +A++ A  H+S YQL
Sbjct: 121 GRIHGPQAAVAAVETAHAAGFDNFNIDLMYGLPNQGRPAAVADITQAIALAPPHISHYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+E  T F          LP ++    +    Q+  +  G   YE+S ++       HNL
Sbjct: 181 TLEPNTAFAARPP----ALPEDDAIYAMQIDCQTRLAGAGYQHYEVSAYALRDRRCRHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK--HPESWLKMVRKNGHAVVEKEFLSSEQ 325
           NYW +GDY+GIG GAH +V           EK   P ++++     G AV +   LS++ 
Sbjct: 237 NYWSFGDYLGIGAGAHGKVTDLDKGKITRYEKLARPMAYIREA-TAGEAVAKSHQLSAQD 295

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGR-----NLDIECERNLQRQGFIERVQFSRLRCTQ 380
              EF+M  LRL EG+  K      G         ++  RN   +G+++     R+R T 
Sbjct: 296 AVLEFMMNALRLPEGVPRKLCTARTGLPWVCFEAAVDDARN---RGWLDITADDRVRPTA 352

Query: 381 RGMTMLDSVI 390
            GM  L++++
Sbjct: 353 LGMRFLNNLL 362


>gi|153854185|ref|ZP_01995493.1| hypothetical protein DORLON_01484 [Dorea longicatena DSM 13814]
 gi|149753234|gb|EDM63165.1| hypothetical protein DORLON_01484 [Dorea longicatena DSM 13814]
          Length = 368

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 207/390 (53%), Gaps = 42/390 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFCVKKC YCDF S     +  QE ++     +++    L G   +SSIF GG
Sbjct: 4   LELYIHIPFCVKKCRYCDFLSAPATPEARQE-YVMGLCQKIRSYYDLAGMYHVSSIFIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E Q +  I D I   + + S+ EIT+E NP +V+      YR  G+NR+S+G+Q
Sbjct: 63  GTPSILETQQMRSIFDAIRATFPIDSDAEITVEVNPGTVDKLKLMAYRNVGINRLSIGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S ++Q L+ LGR H   + +    LAR + F  ++ DL+  +P QT+  WE  L++    
Sbjct: 123 STDDQELKMLGRIHTYKDFLDTYTLAREVGFQNINVDLMSGIPFQTLGGWEDTLKKVAEL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV-------LPSENVAVDLYNLTQSITSAHGLHA 250
             +H+S Y L IE+GT FY+ + +G+         LP E+    +Y  T++I  ++G H 
Sbjct: 183 GPEHISAYSLIIEEGTPFYEKYGEGERAEARRRRELPDEDTERMMYQFTKNILWSYGYHR 242

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G E  HNL YW   +Y+GIG GA S +                        
Sbjct: 243 YEISNYAKEGYECRHNLGYWNRTEYLGIGTGAASLI------------------------ 278

Query: 311 NGHAVVEK---EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL----Q 363
           N    VE    E LS + Q +E++ +GLR  EG+S  D+    GR+++    + L    Q
Sbjct: 279 NNQRFVEGGEIEVLSLQNQMEEYMFLGLRKIEGVSKTDFRQTFGRSIENAYGKVLIDMYQ 338

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +Q   +  ++ RL  T++G+ + + V++  
Sbjct: 339 KQLLEDTGEYIRL--TEKGIDVSNYVMSEF 366


>gi|254448540|ref|ZP_05062000.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
 gi|198261923|gb|EDY86208.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
          Length = 400

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 202/389 (51%), Gaps = 23/389 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFF 76
           L +YVH P+CV+KCPYCDFNSH R   + +  +I + + ++ W        PR + SIFF
Sbjct: 20  LSLYVHLPWCVRKCPYCDFNSHERE-SLPEIEYIDALIRDLDWELSQADWTPRPLHSIFF 78

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + I  +L  +        ++EIT+EANP + E   F GYR+AGV R+S+G
Sbjct: 79  GGGTPSLFSAEAIQRLLRAVEAKLGFEEDIEITLEANPGTAEAERFTGYRQAGVTRLSIG 138

Query: 137 VQSLEEQSLRFLGRNHNASE-----------AIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           VQS ++Q L+ LGR H + +                H   + F   + DL+YALP Q + 
Sbjct: 139 VQSFDDQQLQKLGRIHRSEQAVAAADMARAAGFTQYHNGAHGF---NLDLMYALPGQRVE 195

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +   ++++AL+    H+S YQLT+E GT FY    +    LP ++ A  +    Q   + 
Sbjct: 196 EALSDVEQALALEPSHISHYQLTLEPGTAFYYRPPE----LPDDDTAFAMQTACQKTLAE 251

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+S +S       HNLNYW++GDY+ IG G+H+++         S  K P+ +L
Sbjct: 252 AGFEHYEVSAYSRPLRACRHNLNYWQFGDYLAIGAGSHAKLTSRQSIHRRSKVKTPDKYL 311

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQR 364
           +    +  A+ E   +   Q+  EF++  LRL EG+    +E   G  L  IE      R
Sbjct: 312 RYAGAH-EALDEAAGIPESQRGFEFMLNALRLVEGVPSALFEQRTGLPLATIEKTLGPLR 370

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +  +      R++ T +G+  L+ ++   
Sbjct: 371 ERGLLTQNARRIQPTDQGLRFLNVLMGEF 399


>gi|167766643|ref|ZP_02438696.1| hypothetical protein CLOSS21_01149 [Clostridium sp. SS2/1]
 gi|167711766|gb|EDS22345.1| hypothetical protein CLOSS21_01149 [Clostridium sp. SS2/1]
 gi|291558660|emb|CBL37460.1| putative oxygen-independent coproporphyrinogen III oxidase
           [butyrate-producing bacterium SSC/2]
          Length = 382

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 217/387 (56%), Gaps = 22/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRS 70
           +N++ +Y+H PFC  KC YCDF S        +E  I ++L +++     W ++L   R 
Sbjct: 3   TNTIELYIHIPFCKSKCKYCDFCSFR-----AEEETIHAYLGKLKEELIFWGKKLAA-RD 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPS +  ++I +I + I +++ +  + EITIEANP +V++     YR+ G+
Sbjct: 57  VVTVFIGGGTPSYLRREDIQMICETIFEHFHICEDAEITIEANPGTVDLKKLCTYRENGI 116

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+QS  ++ L +LGR H   E + +   AR   F  ++ DL+ A+PKQT+T +E 
Sbjct: 117 NRISFGLQSTVKEELEYLGRIHTYEEFLQSFDWARQAGFLNINVDLMSAVPKQTLTSYEE 176

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++    + +H+S Y L IE+GT FY+ +K  +L LPSE   V +Y +T+ I + +G  
Sbjct: 177 NLRKIAKLSPEHISAYSLIIEEGTPFYEDNKLEEL-LPSEEDEVLMYRMTEKILNEYGYD 235

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G ES HNL YW +  Y+G+G  A S +          ++ + E     ++
Sbjct: 236 KYEISNYAKPGFESRHNLGYWSHIPYLGVGLNASSYLDEKRFENPSDMKDYLE-----IQ 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
             G A      LS  +Q +EF+ +GLR  +GIS K++    G ++D    + L    +QG
Sbjct: 291 SFGDAYEGARSLSVYEQMEEFMFLGLRKTKGISKKEFIERFGCSMDSVYGKPLIESMKQG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            + + Q  R+  TQ G  + + V+   
Sbjct: 351 MM-KEQGDRVFLTQDGTLVSNQVLCEF 376


>gi|212636428|ref|YP_002312953.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
 gi|212557912|gb|ACJ30366.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
          Length = 378

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 194/352 (55%), Gaps = 17/352 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q  ++ + + +++        R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQHGELPQTEYVDALIADLKQDLHYVQGRQLHTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  +L  + K      N+EIT+EANP ++E ++F+ Y++AGV R+S+GVQ
Sbjct: 67  GTPSLFDAAQIKRLLTEVDKLIKFKDNIEITMEANPGTLEHDDFEAYQRAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H+ +EA +AA     + +   + DL++ LP Q+  +   +++ A   
Sbjct: 127 SFSSDKLNLLGRIHDKTEAQVAAKKAKTSGYNSFNLDLMHGLPNQSFDEALADIETAAEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  TLF+         LP +     +Y   Q   +  G   YEIS +S
Sbjct: 187 APPHLSWYQLTIEPNTLFHSKPPQ----LPDDEKLWRIYEQGQKRLAELGYVQYEISAYS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH ++    H ++  +++ KHP+ +L          
Sbjct: 243 KEGFQCQHNLNYWQFGDYLGIGCGAHGKITQLKHNKILRTVKIKHPKGYLAASDYTSDTT 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           + +E    E +  E+LM  LRL   I  +++E   G       ER++  QG 
Sbjct: 303 IVEE----EDRPLEYLMNRLRLMTPIPKEEFEQRTG------LERSVISQGI 344


>gi|296269131|ref|YP_003651763.1| oxygen-independent coproporphyrinogen III oxidase [Thermobispora
           bispora DSM 43833]
 gi|296091918|gb|ADG87870.1| oxygen-independent coproporphyrinogen III oxidase [Thermobispora
           bispora DSM 43833]
          Length = 403

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/395 (34%), Positives = 195/395 (49%), Gaps = 20/395 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQL 65
           + + G GS   G YVH PFC  +C YCDFN++             +  + + E++  R++
Sbjct: 17  SALDGLGSRPFGFYVHVPFCATRCGYCDFNTYTAAELGPGASPAGYADTVIQEVRLARRV 76

Query: 66  TG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            G   PR + ++FFGGGTP+L+   ++  IL  IA  + ++   E+T EANP SV     
Sbjct: 77  LGDAAPR-VETVFFGGGTPTLLPAADLVRILRAIAGEFGLAPGAEVTTEANPESVSPAYL 135

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R  G  R+S G+QS  E  LR L R H    A+ A+  A    F  ++ DLIY  P 
Sbjct: 136 EELRAGGFTRVSFGMQSAREHVLRVLDRRHTPGRAVQAVREAHAAGFAHVNLDLIYNTPG 195

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W   L+ AL+   DH+S Y L +E GT      + G+L +P E+VA D Y + + 
Sbjct: 196 ESDDDWRATLETALAAGPDHVSAYSLIVEDGTRLAARVRRGELPMPDEDVAADRYLIAEE 255

Query: 242 ITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + SA G   YEISN +   A    HNL YW  GD+ G GPGAH  V  G+    +   KH
Sbjct: 256 LLSAAGFRWYEISNWARTEAGRCRHNLLYWTSGDWWGAGPGAHGHVG-GTRWWNV---KH 311

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +   +         +E L+ E++A E +M+ LRL  G+ +      A       C R
Sbjct: 312 PARYAARLAAGKSPAQAREVLTPEERATERIMLELRLATGLPLDAIPPGA----RPACAR 367

Query: 361 NLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
            L   G +E   F   R   T RG  + DSV  +L
Sbjct: 368 ALA-DGLLEVEPFKAGRAVLTLRGRLLADSVARDL 401


>gi|311087926|gb|ADP68005.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 213/384 (55%), Gaps = 31/384 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF GG
Sbjct: 7   ISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLKDFERDLSLINNRNINTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+Q
Sbjct: 67  GTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTIEYQNFIQYKNSGINRFSLGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+   
Sbjct: 127 TFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQCN 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S 
Sbjct: 187 PSHISWYQLTIEPNTVFYA----KKIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYSK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +  HNLNYW +GDYIGIG G+H ++           +K+ E    +  KN +  +  
Sbjct: 243 FNYQCQHNLNYWNFGDYIGIGCGSHGKI----------TQKNGEIIRTIKNKNINDFLSG 292

Query: 319 EFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQ---RQG 366
           ++++S  Q        E+ M   RL + I  K +      N +IE    E+N+Q   ++G
Sbjct: 293 KYINSVYQVSKRDKIFEYFMNVFRLYKPIFKKHFR----ENTNIEESFIEKNIQIAIQEG 348

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
           F+   Q      T++G   L+S++
Sbjct: 349 FLIN-QSDCWHTTKKGKNFLNSLL 371


>gi|313905058|ref|ZP_07838428.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           cellulosolvens 6]
 gi|313470128|gb|EFR65460.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           cellulosolvens 6]
          Length = 404

 Score =  219 bits (557), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 214/402 (53%), Gaps = 29/402 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
           +++ +Y+H PFCVKKC YCDF S      V Q +++ + L +++   +  G R  +S++F
Sbjct: 2   DAVEIYIHIPFCVKKCGYCDFLSFPAGVDV-QRSYVDALLRQIRQYGKKRGQRLPVSTVF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS+ EP+ +  IL+ + + + V ++ EI++E+NP ++       YR  G+NR+S+
Sbjct: 61  IGGGTPSVPEPELLGEILEAVREVFDVRADAEISMESNPGTLTAEKLAAYRNFGINRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G QS+++  L+ LGR H   + + +  +AR   F  ++ DL+ ALP QT   WE  L  A
Sbjct: 121 GCQSMDDAELKRLGRIHTREDFLDSFRMAREAGFDNINIDLMSALPGQTAESWERGLALA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-------------------LPSENVAVDL 235
            S   +H+S Y L IE+GT F+  +++ + +                   LP E     +
Sbjct: 181 CSLKPEHISAYSLIIEEGTPFFDRYREQEEILARGMDFSGGGQEIPEGEQLPDEETERRM 240

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVA 294
           Y  T+ I S  G H YEISN+S  G E  HNL YW    Y+G G GA S   K G     
Sbjct: 241 YRRTEEILSVSGYHRYEISNYSLEGRECRHNLGYWTLVPYLGFGLGASSYEEKTGDGEAY 300

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +       S LK       A  + E+L+   +  EF+++GLRL  G+S+++++   G  L
Sbjct: 301 VRYRNT--SDLKKYLAGDFAPRDLEYLTLRDRQAEFMILGLRLTRGVSLQEFQERFGVRL 358

Query: 355 -DIECE--RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            D+  +  R    QG +E ++  RL  T  G+++ + V+A+ 
Sbjct: 359 SDVYGDKIRRYTGQGLLE-IREGRLFLTADGISVSNVVMADF 399


>gi|315504223|ref|YP_004083110.1| oxygen-independent coproporphyrinogen iii oxidase [Micromonospora
           sp. L5]
 gi|315410842|gb|ADU08959.1| oxygen-independent coproporphyrinogen III oxidase [Micromonospora
           sp. L5]
          Length = 414

 Score =  219 bits (557), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 204/391 (52%), Gaps = 23/391 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG---P 68
           G+   GVYVH PFC  +C YCDFN++      G   +E +  S L E+    ++ G   P
Sbjct: 33  GARGFGVYVHVPFCASRCGYCDFNTYTASELGGGASRETYADSVLAELALAARVLGDSPP 92

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   + +  R A
Sbjct: 93  PRVDTVFVGGGTPTLLPADDLARILDGIDRVWGLAADAEVTTEANPESVSPESLKTLRAA 152

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RISLG+QS     L  L R H+A  A AA   AR+  F  ++ DLIY  P +T   +
Sbjct: 153 GYTRISLGMQSAAPGVLAVLDRRHSAGRATAAALEARDAGFEHVNLDLIYGTPGETADDF 212

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L + +   VDH+S Y L +E GT      + G+L  PS++VA D Y   ++     G
Sbjct: 213 AASLAQVVDAGVDHVSAYALIVEDGTRLAGRMRRGELPYPSDDVAADRYLAAEAALGEAG 272

Query: 248 LHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
              YE+SN +   A +  HNL YW   D+ G+GPGAHS V      V     KHP ++  
Sbjct: 273 FSWYEVSNWARSAAAACRHNLLYWTGADWWGLGPGAHSHVG----GVRWWNVKHPSAYAA 328

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG--ISVKDWEMLAGRNLDIECERNLQR 364
            + +     + +E L+ ++Q  E +M+ +RL  G  + V D    AG       ER  + 
Sbjct: 329 RLAEGASPALAREQLTPDEQHMEDVMLRVRLASGLPLDVLDEPGRAG------AERA-RD 381

Query: 365 QGFIERVQFSR--LRCTQRGMTMLDSVIANL 393
            G ++   ++R  +  T RG  + D+V+ +L
Sbjct: 382 AGLLDAGAYARGLVVLTLRGRLLADAVVRDL 412


>gi|313203090|ref|YP_004041747.1| oxygeN-independent coproporphyrinogen iii oxidase [Paludibacter
           propionicigenes WB4]
 gi|312442406|gb|ADQ78762.1| oxygen-independent coproporphyrinogen III oxidase [Paludibacter
           propionicigenes WB4]
          Length = 375

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 189/340 (55%), Gaps = 16/340 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF + V    +   + ++  + E+   +      +IS+I+FGGG
Sbjct: 3   GIYIHIPFCSKRCTYCDFYTEVAPDLI--PDLVKHLVKEINIRKDYLKNETISTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  +  + ILDGI   +TV  N EIT EANP  + V+ F   +    NRIS+G+QS
Sbjct: 61  TPSILSREQFSEILDGIFAVYTVEENAEITFEANPDDLTVDFFDSIKYLPFNRISIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ + R H A +AI A+  A+N  F  +S DLIY LP Q++  WE +L  ALS  
Sbjct: 121 FDDNDLKRINRRHTADQAIKAVKNAQNAGFDNISIDLIYGLPLQSIEDWEKQLDIALSLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + H+S Y LT E+GT  +K  + G LV P  +    ++Y L        G  AYEISN +
Sbjct: 181 IQHVSAYGLTYEEGTALWKQREKG-LVKPIIDETMNEMYLLLVKKMKEKGFEAYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW+   Y+GIGP AHS   V       SI+ +  +      +N     E
Sbjct: 240 LDGFRSKHNSSYWKQNSYLGIGPSAHSYDLVSRQWNVASIKAYIAAL-----ENNTPYFE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---GRNL 354
           KE L+   + ++++M+ LR  +G+   D++ L+   G+NL
Sbjct: 295 KEELTLYDRYNDYVMVSLRTSDGL---DFDFLSSEFGQNL 331


>gi|311086271|gb|ADP66353.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086846|gb|ADP66927.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087435|gb|ADP67515.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 213/384 (55%), Gaps = 31/384 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF GG
Sbjct: 7   ISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLRDFERDLSLINNRNINTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+Q
Sbjct: 67  GTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTIEYQNFIQYKNSGINRFSLGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+   
Sbjct: 127 TFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQCN 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S 
Sbjct: 187 PSHISWYQLTIEPNTVFYA----KKIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYSK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +  HNLNYW +GDYIGIG G+H ++           +K+ E    +  KN +  +  
Sbjct: 243 FNYQCQHNLNYWNFGDYIGIGCGSHGKI----------TQKNGEIIRTIKNKNINDFLSG 292

Query: 319 EFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQ---RQG 366
           ++++S  Q        E+ M   RL + I  K +      N +IE    E+N+Q   ++G
Sbjct: 293 KYINSVYQVSKRDKIFEYFMNVFRLYKPIFKKHFR----ENTNIEESFIEKNIQIAIQEG 348

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
           F+   Q      T++G   L+S++
Sbjct: 349 FLIN-QSDCWHTTKKGKNFLNSLL 371


>gi|325262639|ref|ZP_08129376.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. D5]
 gi|324032471|gb|EGB93749.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. D5]
          Length = 395

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 208/388 (53%), Gaps = 24/388 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIF 75
             L +Y+H PFCV+KC YCDF S        QE ++ + L E+Q  ++    P  ++++F
Sbjct: 3   KELELYLHIPFCVRKCAYCDFLSAPADEAARQE-YVDALLMEIQGYKETYYVPYRVTTVF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+  + I  I   + +++ ++   EITIE NP ++     + ++ AG+NR+S+
Sbjct: 62  IGGGTPSLLTAKQITEIFAALHQSFRLADTAEITIEVNPGTITEEKLRSWKAAGINRLSI 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS + + L+ LGR H   E +    LAR   F  ++ DLI A+P QT   WE  L RA
Sbjct: 122 GLQSADNEELKMLGRIHTWEEFMETYTLAREKGFENINIDLISAIPGQTEASWENTLTRA 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH--KDG----DLV---------LPSENVAVDLYNLT 239
                +H+S Y L +E+GT FY+ +   DG    D++         LP E+    +Y +T
Sbjct: 182 ARLDPEHISAYSLIVEEGTPFYERYGEPDGQRAVDVIDTENPELPSLPDEDTERAIYEMT 241

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
             I   +G H YEISN++  G E  HNL YW   +Y+GIG GA S VK   +     I  
Sbjct: 242 AGILLHYGYHRYEISNYAKKGYECRHNLGYWERKEYLGIGLGASSFVKGSRYHNTEDI-- 299

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
              S+LK V+       + E LS+  + +EF+ +GLR  +GIS+  +E L  +++     
Sbjct: 300 --SSYLKKVQGREEIKEDVEQLSTADEIEEFMFLGLRETKGISISRFEQLYKQSIFDVYG 357

Query: 360 RNLQR--QGFIERVQFSRLRCTQRGMTM 385
             L++  +G +  V    +R T RG+ +
Sbjct: 358 TELEKLTEGELLTVDGDHIRLTGRGIDV 385


>gi|21672795|ref|NP_660862.1| hypothetical protein BUsg532 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091668|sp|Q8K928|Y532_BUCAP RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein BUsg_532
 gi|21623444|gb|AAM68073.1| hypothetical 42.6 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 376

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 116/330 (35%), Positives = 186/330 (56%), Gaps = 10/330 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C+KKC YCDF S+V +  + ++ +I   L +++    L   R I+SIF GG
Sbjct: 7   ISLYIHIPWCIKKCGYCDFYSYVNKSFIPEKEYIDHLLKDLEKDLSLIKEREINSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++  +I  ++  I K   +S+  EITIEANP+++E   F  Y+K+G+NR S+GVQ
Sbjct: 67  GTPSLLKSSSIKKMMREIKKRINISNTAEITIEANPTTLEYKRFFNYKKSGINRFSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +     L+ + R +N  EAI A+   + I    + D++Y LP Q++    ++LQ A+ Y 
Sbjct: 127 TFNSDLLKKIERTYNKREAILAVEEIKKINKNFNLDIMYGLPNQSLKDVLLDLQYAVKYN 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S YQLT+E  T FY       L LP+EN    +    +      G   YEIS+++ 
Sbjct: 187 PTHISWYQLTLEPNTPFYV----KKLNLPNENNIFKMLVEGEKFLKQSGYKKYEISSYAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVE 317
           L  E  HNLNYW +GDYIGIG  AH ++   +  +  +I+ K+   ++     NG  +  
Sbjct: 243 LNYECQHNLNYWNFGDYIGIGCSAHGKITQINGDIIRTIKNKNINDFM-----NGKYLKH 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           K F+  + +  E+ M   RL + +  + +E
Sbjct: 298 KNFVLKKDKPFEYFMNIFRLYKPVLKRQFE 327


>gi|153813171|ref|ZP_01965839.1| hypothetical protein RUMOBE_03587 [Ruminococcus obeum ATCC 29174]
 gi|149830702|gb|EDM85793.1| hypothetical protein RUMOBE_03587 [Ruminococcus obeum ATCC 29174]
          Length = 381

 Score =  218 bits (556), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 212/379 (55%), Gaps = 15/379 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFCV+KC YCDF S     +  ++ +I++   E+Q ++ +     I S+F GG
Sbjct: 9   LELYIHIPFCVQKCQYCDFLSGPSDQET-RDRYIKALRAEIQAVQGVEA-YEIVSVFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++ + IA I++ I K +  S + EITIE+NP +V++     YR+ G+NR+SLG+Q
Sbjct: 67  GTPSVLKAEAIASIMETIQKKFCFSPDAEITIESNPGTVDLAKLNAYRETGINRLSLGLQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + + LR LGR H   E + +   AR   F  ++ DL++A+P QT   W   L++    
Sbjct: 127 STDSKELRMLGRIHTYEEFLQSYQWAREAGFQNINIDLMFAIPGQTGEAWRAHLRQVAEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L IE+GT F     + +L LP E+    +Y  T  I + +G   YEISN++
Sbjct: 187 KPEHISAYSLIIEEGTPF----AECELDLPDEDTEYQMYEDTAGILAEYGYQQYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HN+ YW+  +Y+G+G GA S    G +R   S  +  + +L           +
Sbjct: 243 KDGYACRHNIGYWKRTEYLGLGLGASSL--YGENR--FSNTRDMQEYLGFSGNTERIRKD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
              LS + Q +EF+ +GLR+ EGIS  D+E   G+ L+      LQ+    GF+E+   +
Sbjct: 299 VLKLSLKDQIEEFMYLGLRMTEGISEIDFEQNFGQKLENIYGSVLQKYKETGFLEKTG-T 357

Query: 375 RLRCTQRGMTMLDSVIANL 393
             R T++G+ + + ++A L
Sbjct: 358 NWRFTRKGIHVSNHILAEL 376


>gi|254976059|ref|ZP_05272531.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-66c26]
 gi|255093450|ref|ZP_05322928.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile CIP 107932]
 gi|255315192|ref|ZP_05356775.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-76w55]
 gi|255517861|ref|ZP_05385537.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-97b34]
 gi|255650977|ref|ZP_05397879.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-37x79]
 gi|260684045|ref|YP_003215330.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile CD196]
 gi|260687705|ref|YP_003218839.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile R20291]
 gi|306520851|ref|ZP_07407198.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-32g58]
 gi|260210208|emb|CBA64428.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile CD196]
 gi|260213722|emb|CBE05617.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile R20291]
          Length = 391

 Score =  218 bits (556), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 206/394 (52%), Gaps = 33/394 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQWMRQ----------- 64
           LG+YVH PFCVKKC YCDFNS    YK+    ++ +I+    EM+               
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNS----YKMDIDSKKRYIEDLKIEMKLYSNKLYKDNKYKNK 57

Query: 65  ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ + 
Sbjct: 58  ECCSLNKNDKITSIFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLE 117

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  ++ G+NR+S+G+Q+++E+ L F+GR H   E       A ++ F  ++ DL+Y+L
Sbjct: 118 KLKTMKEIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINVDLMYSL 177

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  W+  L++ +     H+S Y L +E+GT  Y M++     L  ENV +++Y  T
Sbjct: 178 PNQTLCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENVDIEMYEYT 237

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            +   + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S+E 
Sbjct: 238 INYLKSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGASGYINENRYNNVESLED 297

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           +  S +K  +     + E E LS +   +E + MGLR+ +GI  +D++   G  +D   +
Sbjct: 298 YHLSLVKREK----PIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFG--IDFREK 351

Query: 360 RNLQRQGFIERV----QFSRLRCTQRGMTMLDSV 389
            N Q +  + R      F  ++ TQ+G  + +SV
Sbjct: 352 YNKQIEMLLARKLINQSFEGIQLTQKGREISNSV 385


>gi|259507808|ref|ZP_05750708.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           efficiens YS-314]
 gi|259164601|gb|EEW49155.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           efficiens YS-314]
          Length = 398

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 191/390 (48%), Gaps = 25/390 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWM-----------RQ 64
            GVYVH PFC  +C YCDFN++         G + ++ +   E++               
Sbjct: 8   FGVYVHVPFCSTRCGYCDFNTYTAGELGSTAGPDTYLDALEVELEMAVARLAAAHEADSD 67

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             GPR   ++F GGGTPSLI    ++ +L GI   + ++   EIT E+NP S     F  
Sbjct: 68  QPGPRPAETVFIGGGTPSLIGADGLSRVLSGIRNTFGLAPGAEITTESNPESTSPEFFDA 127

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R++G NRISLG+QS     LR L R H     +AA   AR   F  ++ D+IY  P +T
Sbjct: 128 LRESGYNRISLGMQSASSSVLRVLDRRHTPGRPVAAAKEARAAGFDHVNLDMIYGTPTET 187

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D Y +     
Sbjct: 188 DEDVRKTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVYADRYEMIDQRL 247

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS   +G HR      KHP  
Sbjct: 248 RANGFDWYEVSNWAKPGGECRHNMGYWVDGDWWGAGPGAHS--HIGDHR--FYNVKHPAR 303

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +      +++ E L+++    E +M+GLRL++G+    +   A R +D   +R   
Sbjct: 304 YSAQIAGGELPIMDTELLTADDHHTERVMLGLRLKQGLPAGIFSPSAHRVIDRHIDR--- 360

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G + RV    +  T  G  + D +IA++
Sbjct: 361 --GLLHRVG-GNIAVTDAGRLLADGIIADI 387


>gi|184156726|ref|YP_001845065.1| coproporphyrinogen III oxidase [Acinetobacter baumannii ACICU]
 gi|332873137|ref|ZP_08441094.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6014059]
 gi|183208320|gb|ACC55718.1| Coproporphyrinogen III oxidase [Acinetobacter baumannii ACICU]
 gi|332738649|gb|EGJ69519.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6014059]
          Length = 368

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 208/373 (55%), Gaps = 18/373 (4%)

Query: 26  PFCVKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           P+CV+KCPYCDFNSH V    +  E    ++++ + + +   ++   RSI S+F GGGTP
Sbjct: 2   PWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRSIHSVFIGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SLI  +  A + + +        + EIT+EANP ++E + F GY +AG+NR+S+GVQ+  
Sbjct: 62  SLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGINRLSIGVQTFN 121

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   +L+ A+     
Sbjct: 122 TDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGAT 181

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G   YE+S      
Sbjct: 182 HISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANGFINYEVSAWR-KE 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HNLNYW++GDY+ IG GAH +V            + P+ +L  V    H  ++K  
Sbjct: 237 QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAE-HLQMKK-- 293

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRLR 377
           + +++   EF+M  LRL +G+  + +E   G +LD   +       R+  +E     RL 
Sbjct: 294 IEADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTSLRSRELLVEDS--DRLA 351

Query: 378 CTQRGMTMLDSVI 390
           CT++G   L+SV+
Sbjct: 352 CTEQGHIFLNSVL 364


>gi|239827778|ref|YP_002950402.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
 gi|239808071|gb|ACS25136.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           WCH70]
          Length = 382

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 206/376 (54%), Gaps = 15/376 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           Y H PFC + C YCDFN   + +  GQ  + ++++   EM+W  +      + ++F GGG
Sbjct: 6   YFHIPFCAQICYYCDFN---KVFFHGQPVDEYLEAMENEMKWTVEAFPTDRLDTLFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++E + +   L  I K++  S   VE T EANP+ +     Q  ++AGVNR+S GVQ
Sbjct: 63  TPTVLEMKQLDFFLQSIYKHFRFSIHEVEFTFEANPNELSKEKLQLLKEAGVNRLSFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++  L+ +GR H   + +  I LA+ I F  +S DL+Y LP+QT+ Q++ +L+ A S 
Sbjct: 123 TFDDSLLKAIGRTHRYEDVMKTIALAKEIGFENISIDLMYGLPQQTLAQFQADLEIAFSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IE  T+FY + + G L LP+E     +Y         HG H YEISN++
Sbjct: 183 DIQHISAYSLIIEPKTIFYNLMRKGKLPLPTEEEEAQMYEEAMRQMEIHGYHQYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y GIG GAHS V  G  R  I   K    +++ V++ G   +E
Sbjct: 243 RPFFESRHNLTYWNNEEYYGIGAGAHSYVG-GVRRANI---KPINKYIETVQETGFPYLE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++  +Q +E + +GLR  EG+S + +    G ++     R +   +++G +E  Q +
Sbjct: 299 VHHVTVSEQMEEEMFLGLRKTEGVSKQRFLEKFGMSVHDVFGRAIAAEKQKGLLEETQ-T 357

Query: 375 RLRCTQRGMTMLDSVI 390
            +R T RG  + + V 
Sbjct: 358 HIRLTHRGKLLGNEVF 373


>gi|25028747|ref|NP_738801.1| coproporphyrinogen III oxidase [Corynebacterium efficiens YS-314]
 gi|23494033|dbj|BAC19001.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium efficiens YS-314]
          Length = 401

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 191/390 (48%), Gaps = 25/390 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWM-----------RQ 64
            GVYVH PFC  +C YCDFN++         G + ++ +   E++               
Sbjct: 11  FGVYVHVPFCSTRCGYCDFNTYTAGELGSTAGPDTYLDALEVELEMAVARLAAAHEADSD 70

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             GPR   ++F GGGTPSLI    ++ +L GI   + ++   EIT E+NP S     F  
Sbjct: 71  QPGPRPAETVFIGGGTPSLIGADGLSRVLSGIRNTFGLAPGAEITTESNPESTSPEFFDA 130

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R++G NRISLG+QS     LR L R H     +AA   AR   F  ++ D+IY  P +T
Sbjct: 131 LRESGYNRISLGMQSASSSVLRVLDRRHTPGRPVAAAKEARAAGFDHVNLDMIYGTPTET 190

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D Y +     
Sbjct: 191 DEDVRKTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVYADRYEMIDQRL 250

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS   +G HR      KHP  
Sbjct: 251 RANGFDWYEVSNWAKPGGECRHNMGYWVDGDWWGAGPGAHS--HIGDHR--FYNVKHPAR 306

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +      +++ E L+++    E +M+GLRL++G+    +   A R +D   +R   
Sbjct: 307 YSAQIAGGELPIMDTELLTADDHHTERVMLGLRLKQGLPAGIFSPSAHRVIDRHIDR--- 363

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G + RV    +  T  G  + D +IA++
Sbjct: 364 --GLLHRVG-GNIAVTDAGRLLADGIIADI 390


>gi|302671372|ref|YP_003831332.1| oxygen-independent coproporphyrinogen III oxidase HemN2
           [Butyrivibrio proteoclasticus B316]
 gi|302395845|gb|ADL34750.1| oxygen-independent coproporphyrinogen III oxidase HemN2
           [Butyrivibrio proteoclasticus B316]
          Length = 389

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 212/397 (53%), Gaps = 38/397 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +Y+H PFCV+KC YCDF S     K G+ +++  +   E+          +I SIFFG
Sbjct: 7   LSLYIHVPFCVRKCLYCDFLSF--NCKAGEIKSYFNALDAEIAMACNSYRDFTIKSIFFG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS ++  +I   L+ I +N+ V  N EI+IE NP+S  ++    YR+AG+NRIS+G 
Sbjct: 65  GGTPSFVDSAHICNTLEHIRENFQVDVNAEISIEVNPASAILDKLTDYRRAGINRISIGA 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL +  L+ +GR HN++        AR   F  ++ D++ ALP QTM  +   L++ +S
Sbjct: 125 QSLNDGELKKIGRAHNSAMFYETFANARKAGFDNINIDIMSALPDQTMDSYMETLEKVVS 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L +E+GT FY M    DL LP E+    +Y+ T+   + +G H YEISN+
Sbjct: 185 LGPEHISAYSLIVEEGTPFYDM----DLNLPDEDTDRQMYHETRRFLAQNGYHRYEISNY 240

Query: 257 S-----FLGAESLHNLNYWRYGDYIGIGPGAHSRVK------VGSHRVAISIEKHPESWL 305
           +         E  HN  YWR G+Y+G+G GA S         +    +  SI     S+L
Sbjct: 241 AKGSDGDKTCECYHNKVYWRRGNYLGLGLGASSMTDDSRWKNISDFNLYQSILLDNTSFL 300

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIE------- 357
               K      E E LS     +EF+ +GLRL EG+S+ +++ L GR++ D+        
Sbjct: 301 D---KFHQLRTEFEKLSRSDCMEEFMFLGLRLVEGVSISEFKSLFGRDIYDVYGKIIEKY 357

Query: 358 -CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             E  L++ G         +R T+ GM + ++V+A+ 
Sbjct: 358 ISEELLEQNG-------DHIRLTETGMDVSNTVMADF 387


>gi|253574644|ref|ZP_04851984.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251845690|gb|EES73698.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 412

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 190/355 (53%), Gaps = 8/355 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +G       VY+H PFC  KC YCDFNS+V + +   + ++++   EM+   Q T P  I
Sbjct: 25  SGPSGAPHAVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLRALDREMELTVQQTPPGEI 83

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            SIF GGGTP+++ PQ +   L  + +++   +S++E T+EANP + + +     +  GV
Sbjct: 84  RSIFVGGGTPTVLTPQEMEFFLASVRRHFPYWASDIEFTMEANPGTTDRDKLTVMKDGGV 143

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ + + L  +GR HN  +   ++  AR +    +S DL++ LP QT+   + 
Sbjct: 144 NRVSFGVQAFQNELLSGIGRIHNTDDVYRSLENARAVGLDNLSIDLMFGLPNQTVEMLDY 203

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            + RAL   + H S+Y L +E+ TLF+ ++    L LPSE   +++Y L        G  
Sbjct: 204 SVSRALELGLPHYSIYSLKVEENTLFHTLYHKNQLPLPSEEEELNMYLLLMERMEQAGYK 263

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G  S HN+ YW+  DY G+G GAH  V    H     +  + E+      
Sbjct: 264 QYEISNFAKPGFASRHNITYWKNEDYYGLGAGAHGYVGRTRHVNIKGVNPYVEAA----- 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           K G   +E+  +S E+  ++F+M+GLR+  GI   D+    G  LD    R L +
Sbjct: 319 KTGLPRLEQFGVSREEAMEDFVMVGLRMLNGIRKADFRRQFGEELDDVFARQLTK 373


>gi|303246587|ref|ZP_07332865.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           fructosovorans JJ]
 gi|302491927|gb|EFL51805.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           fructosovorans JJ]
          Length = 375

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 204/380 (53%), Gaps = 14/380 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC F S  R + +GQ E ++ + L E++ W R+L+ P+ + +I+FGG
Sbjct: 3   LYIHVPFCRGKCRYCSFVS--RPFDMGQVEAYVATLLLEIRHWGRKLSRPK-LETIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGV 137
           GTPSL+ P  +A I+  + + + +   VE T EANP S+V+    +   K GVNR+SLGV
Sbjct: 60  GTPSLLPPWALARIMPELRRQFDLDDVVEWTFEANPDSAVDGPYLKSLLKYGVNRLSLGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL +  LRFLGR H+A +AIAA  LAR + F  +S D I+ LP Q    W  +L+ A+ 
Sbjct: 120 QSLSDADLRFLGRPHDAGQAIAAYGLARQVGFKNISLDFIWGLPGQREAVWLEQLRTAVK 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HLS Y LT+E GT   +    GD+ LP EN    +Y          G   YEISN 
Sbjct: 180 LRPEHLSCYGLTVEAGTPLAEDVAAGDVTLPGENEQGRMYVHGAEFLEEAGYLQYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           + +G  S HN  YW   DY+G+GP A S ++   H     + +    W  +VR  G    
Sbjct: 240 ARMGFVSRHNSGYWEGKDYLGLGPAAVSTLEGVRHENPSDLRE----WGGLVRA-GKCGQ 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFS 374
               L+  ++  E +M+ LR  +G+ +  +    GR+   D E      RQ  + R+   
Sbjct: 295 GGAALTEAEKTREMVMLSLRTAKGLRLAAYRKATGRDFLKDNEGLVTALRQNGLIRISAG 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            LR T+ G  + + ++  L+
Sbjct: 355 HLRLTKNGFLVSNVILERLS 374


>gi|90023291|ref|YP_529118.1| coproporphyrinogen III oxidase, anaerobic [Saccharophagus degradans
           2-40]
 gi|89952891|gb|ABD82906.1| coproporphyrinogen III oxidase, anaerobic [Saccharophagus degradans
           2-40]
          Length = 400

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/361 (36%), Positives = 194/361 (53%), Gaps = 16/361 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           L +YVH P+CV+KCPYCDFNSH    ++  ++++     ++   + Q+ G R I S+FFG
Sbjct: 20  LSLYVHIPWCVRKCPYCDFNSHAAPSELPIDDYLACLKQDLLHDLDQVQG-RKIHSVFFG 78

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I  +L  +A      +  EIT+EANP + E  NF   R  GVNR+SLGV
Sbjct: 79  GGTPSLFPGVAIGDLLAFVADKIGFEAGAEITLEANPGTAERGNFTSLRMEGVNRLSLGV 138

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L+ LGR H   EA+ A  LAR+  F  ++ DL++ LP+QT  Q   +LQ+A+ 
Sbjct: 139 QSFNDDHLQRLGRIHGRDEALNAFQLARDAGFNNINIDLMHGLPEQTPEQGLSDLQQAIG 198

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S YQLTIE  T FY        VLP E+    +  L      + G   YE S +
Sbjct: 199 LGPEHISWYQLTIEPNTHFYSHTP----VLPLEDTLESIQELGHEALQSAGYLRYETSAY 254

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKH---PESWLKMVRK-- 310
           +     S HNLNYW++GDY+ IG GAH +   +  + + IS  +    P+ +L   +   
Sbjct: 255 AQNAKRSAHNLNYWQFGDYLAIGAGAHGKNTTLTPNGLVISRNRKTRLPKDYLAAAKSTA 314

Query: 311 NGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGF 367
           NG+    K+ L    Q   EF+M  LRL +G+    +    G  L+   +   +L+ QG 
Sbjct: 315 NGNPFCAKQSLIDPSQLPLEFMMNALRLMDGVKASTYFERTGLALEPLAQTLADLRAQGL 374

Query: 368 I 368
           +
Sbjct: 375 M 375


>gi|217967496|ref|YP_002353002.1| oxygen-independent coproporphyrinogen III oxidase [Dictyoglomus
           turgidum DSM 6724]
 gi|217336595|gb|ACK42388.1| oxygen-independent coproporphyrinogen III oxidase [Dictyoglomus
           turgidum DSM 6724]
          Length = 377

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/337 (35%), Positives = 191/337 (56%), Gaps = 16/337 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           SN +G+Y+H PFCV+KCPYCDF S  R  K  +E +I   L E+      +   +I +I+
Sbjct: 4   SNPIGIYIHIPFCVRKCPYCDFVS-FRYSKEEEERYISHLLREIDMK---SKGETIDTIY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++  + +  I + I + + +S  VEI++E NP +V+    + +++ G+NRIS+
Sbjct: 60  LGGGTPSILSLKGLEKIFEFIQEKFKLSKGVEISMEVNPGTVDREKIKVWKELGINRISI 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G QS  E+ L+ LGR H+  +     H+ R   F  ++ DLIY+LP Q    +   L+ A
Sbjct: 120 GAQSFIEKELKILGRIHDTDDIYKTFHMLREADFKNINIDLIYSLPFQEQEDFYFSLKEA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    +H+S+Y L IE+GTLFYKM+ +  + LP  ++  ++++   +    +G   YEIS
Sbjct: 180 VKLNPEHISIYNLMIEEGTLFYKMYLESKIKLPDSDMEAEMFSFAMNYLKDNGFIHYEIS 239

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESWLKMVRK 310
           N S     +  HNL YW    Y G G  A+S    V+ G+ R       +   +   ++K
Sbjct: 240 NFSKNENYKCKHNLKYWNQEKYYGFGVSAYSYDPPVRYGNCR-------NLYVYYGKIKK 292

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               + E+EFL+ ++ A +FL + LRL EGIS K++E
Sbjct: 293 GILPIEEREFLTGDKLAKDFLFLRLRLMEGISKKEFE 329


>gi|212716005|ref|ZP_03324133.1| hypothetical protein BIFCAT_00917 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661372|gb|EEB21947.1| hypothetical protein BIFCAT_00917 [Bifidobacterium catenulatum DSM
           16992]
          Length = 401

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 198/394 (50%), Gaps = 29/394 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VY+H PFC+++C YCDFN++          + N+    + EM  +R       I     +
Sbjct: 4   VYIHVPFCMRRCGYCDFNTYTAVDMGEGASRGNYANMVIREMSIVRDWQIAHGIDEPEAA 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++++  ++  +L+ +   W ++ N EIT EANP +V  +  +     G NR
Sbjct: 64  TVFFGGGTPTILKASDLVAMLNAVRDTWGIAENAEITTEANPDTVNADYVKELANGGFNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H  +   A I +A  +  R S DLIY  P +++  W   ++
Sbjct: 124 ISFGMQSAVPSVLKILDRTHTPANVAAGIAVANAVGMRSSVDLIYGAPGESLDDWRASVR 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+   T   +    G L  P ++     Y +   + SA GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVAPNTKMGRQIAAGTLPTPDDDDEATKYEIADDLLSAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR------VKVGSHRVAISIEK------- 299
           ISN +  G ES HNL YWR  D+ G+GPGAHS       V+  + +      K       
Sbjct: 244 ISNWARPGYESQHNLGYWRNIDWAGLGPGAHSHYGNVLDVEQSTPKEKTETVKTSGLRSW 303

Query: 300 ---HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
              HP  W + +          E +S+E+  +E +M+GLR+REG+ +     L G  +D+
Sbjct: 304 DIAHPRMWGQAINAGDMPWSGSERISNEENLEEIIMLGLRIREGLDLS----LLGNTVDM 359

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              + ++ +G I  ++  R+  T+ G  + D+VI
Sbjct: 360 ARIQPMEDEGLI-VIRDGRVIPTRTGRLLNDTVI 392


>gi|55823155|ref|YP_141596.1| coproporphyrinogen III oxidase [Streptococcus thermophilus
           CNRZ1066]
 gi|55739140|gb|AAV62781.1| coproporphyrinogen III oxidase [Streptococcus thermophilus
           CNRZ1066]
          Length = 378

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 210/372 (56%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E  W  +L+  + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIHE--W--ELSDIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I   ++  F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLNEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + +     +R
Sbjct: 300 LTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFSDTYGDIVKKLQEDGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|157374365|ref|YP_001472965.1| coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
 gi|157316739|gb|ABV35837.1| Coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 378

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/336 (35%), Positives = 190/336 (56%), Gaps = 11/336 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH +  ++ Q+ +I + + +++   Q    R + SIF GG
Sbjct: 7   LSLYVHIPWCVQKCPYCDFNSHGQHGELPQQAYIDALIADLKNDIQYVQGRKLHSIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   IA +L  ++     S  +EI++EANP ++E ++F+ Y +AGV R+S+GVQ
Sbjct: 67  GTPSLFDAAQIARLLTQVSLLIPFSEQIEISMEANPGTLEHDDFKAYYQAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H+  EA  A  +A    +   + DL++ LP Q+  +   ++  A + 
Sbjct: 127 SFSSDKLNLLGRIHDKDEAKVAARMASEAGYDSFNLDLMHGLPNQSFDEAMADIDTAAAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE+ TLF+         LP +     +Y   Q   ++ G   YEIS ++
Sbjct: 187 NPPHLSWYQLTIEQNTLFHSKPPQ----LPDDEALWKIYEQGQKKLASLGYEQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G    HN+NYW++GDY+GIG GAH +V  + S+++  +++ KHP+ +L       H  
Sbjct: 243 KPGYRCQHNINYWQFGDYLGIGCGAHGKVTLLESNKIIRTVKIKHPKGYLAA----EHYT 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +   +  +++A E+LM   RL   I   ++E   G
Sbjct: 299 FDLTEVPEDERALEYLMNRFRLISPIPKSEFEQRTG 334


>gi|324998261|ref|ZP_08119373.1| coproporphyrinogen III oxidase, anaerobic [Pseudonocardia sp. P1]
          Length = 395

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQW 61
           A+ +++T   +   G+YVH PFC  +C YCDFN++      G     E ++++   E+  
Sbjct: 2   AHSSDVTA--APPFGIYVHVPFCATRCGYCDFNTYTASELAGDASSPEGWLEAARREIAL 59

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +  G R++ ++F GGGTPSL+    ++ ++  I   + V+   E+T E+NP S     
Sbjct: 60  AARTVGDRTVETVFVGGGTPSLLGADRLSAVMAAIRSEFRVAPGCEVTTESNPESTSPEF 119

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
           F G R  G  R+SLG+QS     L  L R H    A+ A   AR   F  ++ DLIYA P
Sbjct: 120 FAGIRDGGYTRVSLGMQSAARHVLAVLDRTHTPGRAVDAAREARAAGFGHVNLDLIYATP 179

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T           L   VDH+S Y L +E GT   +  + G+L  P ++VA   Y L  
Sbjct: 180 GETDDDLRRSADAVLEAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDVAATRYELLD 239

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +     GL  YE+SN S  GAE  HNL YWR GD+ G+GPGAHS +  G+    +   KH
Sbjct: 240 ARLRDAGLRWYEVSNWSLPGAECRHNLGYWRDGDWWGVGPGAHSHL-AGTRWWNV---KH 295

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           P  W  ++         +E L+  ++  E +M+ LRL EG+ +
Sbjct: 296 PARWAGLLADGAVPEAGREELTPAERHTESVMLRLRLAEGMPL 338


>gi|17232448|ref|NP_488996.1| coproporphyrinogen III oxidase [Nostoc sp. PCC 7120]
 gi|17134094|dbj|BAB76655.1| coproporphyrinogen III oxidase [Nostoc sp. PCC 7120]
          Length = 396

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 201/383 (52%), Gaps = 16/383 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHV------RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           YVH PFC ++C YCDF   V          V    ++     E+        P  + ++F
Sbjct: 14  YVHIPFCRRRCFYCDFPIFVVGDRQRGETSVTISGYVDVLCEEIAITPAFGQP--LKTVF 71

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + +A IL  + K + ++ + EI++E +P + ++ + QGYR  GVNR+SL
Sbjct: 72  FGGGTPSLLSTEQLAQILVTLDKQFGIAPDAEISMEVDPGTFDLAHIQGYRSVGVNRVSL 131

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +E+ L+  GR+H+  +  AAI L   +  P  S DLI  LP Q++ QW+  L  A
Sbjct: 132 GVQAFQEELLKVAGRSHSLKDIFAAIDLIHQVEIPEFSIDLISGLPHQSLDQWQDSLDTA 191

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++ A  H+S+Y LTIE GT F + +K GD  LP++   V +Y + Q I +      YEIS
Sbjct: 192 VNIAPTHISIYDLTIEPGTAFGRYYKPGDNPLPTDETTVKMYQMGQKILTGGDYEHYEIS 251

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G +  HN  YW    Y G G GA S V+ G         K    W++ +  N H 
Sbjct: 252 NYAKPGHQCRHNRVYWENRPYYGFGMGAASYVE-GKRFTRPRKTKEYYQWVQELIAN-HG 309

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           V++ E         E LM+GLRL +G+S+       G+    E  + LQ    QG+++ V
Sbjct: 310 VIDWEITPKADVLLETLMLGLRLADGVSLAALTEEFGKEKIQELHQCLQPYFTQGWVQVV 369

Query: 372 QFSRLRCTQ-RGMTMLDSVIANL 393
              RLR +   G    + V+A+L
Sbjct: 370 G-DRLRLSDPDGFLFSNVVLADL 391


>gi|256832777|ref|YP_003161504.1| oxygen-independent coproporphyrinogen III oxidase [Jonesia
           denitrificans DSM 20603]
 gi|256686308|gb|ACV09201.1| oxygen-independent coproporphyrinogen III oxidase [Jonesia
           denitrificans DSM 20603]
          Length = 423

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/398 (33%), Positives = 202/398 (50%), Gaps = 26/398 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG-----PR 69
           + GVY+H PFC  +C YCDFN++      G   Q N+ Q+   E+   RQ+       PR
Sbjct: 29  AFGVYIHVPFCSVRCGYCDFNTYTASELGGGASQRNYAQTAAQEILLARQVMDRAGYPPR 88

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             S+IFFGGGTP+L+  Q++  ++  + + W ++   E+T EANP SV  ++ +     G
Sbjct: 89  PASTIFFGGGTPTLLPAQDLVSLVSTVRQTWGLADGAEVTTEANPDSVTPHSMEILANGG 148

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+SLG+QS+    L  L R HN +   +A+  A      +S DLIY  P ++M  W  
Sbjct: 149 FTRVSLGMQSVVPHVLATLERTHNPANVASAVRWAHEAGLEVSVDLIYGTPGESMDDWRR 208

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  A++    H+S Y LT+E+GT      + GD+ LPS +   D Y +  ++ S  G  
Sbjct: 209 SLDAAIATGAGHVSAYALTVEQGTRMAVQVRRGDIELPSLDDQADKYEVADTVLSDAGYQ 268

Query: 250 AYEISNHSFLGAES-----LHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAISIE---- 298
            YEISN +   A+       HNL YWR  D+ GIGPGAHS +     +H  A S      
Sbjct: 269 WYEISNWARPRADGELAVCRHNLAYWRGHDWWGIGPGAHSFMAGDPNAHDDAPSAGVRWW 328

Query: 299 --KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP  +   +         +E L+ +    E +M+G+RLREG+ V+ W     R +  
Sbjct: 329 NVKHPIRYAHALENGQSPAAGRELLTGDDAHLERVMLGIRLREGMPVQ-WVAEERREV-- 385

Query: 357 ECERNLQRQGFIERVQFS-RLRCTQRGMTMLDSVIANL 393
                + R+    R  F+ R++ T+ G  M D+++ +L
Sbjct: 386 -LASLIARELIDARAVFAGRVQLTRSGRLMADAIVRDL 422


>gi|322516608|ref|ZP_08069522.1| coproporphyrinogen dehydrogenase [Streptococcus vestibularis ATCC
           49124]
 gi|322124878|gb|EFX96302.1| coproporphyrinogen dehydrogenase [Streptococcus vestibularis ATCC
           49124]
          Length = 378

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 208/372 (55%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++ + + E  W  +L   + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLSALIRE--W--ELLNIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I   ++  F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLHEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + +     +R
Sbjct: 300 LTKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|39995141|ref|NP_951092.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           sulfurreducens PCA]
 gi|39981903|gb|AAR33365.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Geobacter sulfurreducens PCA]
 gi|307634646|gb|ADI82894.2| oxygen-independent coproporphyrinogen III oxidase, putative
           [Geobacter sulfurreducens KN400]
          Length = 385

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/388 (33%), Positives = 199/388 (51%), Gaps = 21/388 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS---SIF 75
           L +YVH PFC+KKC YC F S      +  +++      EM+       P  +S   +++
Sbjct: 5   LHLYVHIPFCLKKCRYCSFVSR-SDAPLAIDDYASLVAREMEMRVAAANPLPLSPATTLY 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +  I+D  A+++ +    EIT+EANP +V       +R AGVNR+SL
Sbjct: 64  LGGGTPSLLSPAALERIIDAAARSYGLGPGAEITLEANPGTVTFQRLADFRSAGVNRLSL 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS ++  L  LGR H A +A  A+   R   F  +  DLI++LP QT  QW  +L  A
Sbjct: 124 GVQSFDDGMLVLLGRLHTARQAREAVAATRRAGFDNIGIDLIHSLPGQTPDQWREQLACA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++   DH+S Y LT+E+GT F  M + G+LVLP E  +  ++  T  +  + G   YEI+
Sbjct: 184 VALNPDHVSAYGLTVEEGTPFAAMEERGELVLPDEEQSALMFEATTDVLVSAGFEHYEIA 243

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +     S HN  YW   +Y+G G GAHS ++  +  V        E +   +      
Sbjct: 244 NFARPHRRSRHNQVYWLRRNYLGFGAGAHSFLRAPAFGVRWKNTDDLELYRDTLAAAELP 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDW--------EMLAGRNLDIECERN-LQRQ 365
             E+  LS      EF  +GLRL +G+  +D+        E + GR ++  C    L R+
Sbjct: 304 GEERTVLSRADAMAEFFFLGLRLLDGVREEDFVREFGDTMENVYGREMERLCSAGLLMRE 363

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G        RL+ ++RG+ + + V A+ 
Sbjct: 364 G-------GRLKLSRRGVILANRVFASF 384


>gi|15617143|ref|NP_240356.1| hypothetical protein BU550 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681895|ref|YP_002468281.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471600|ref|ZP_05635599.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387311|sp|P57615|Y550_BUCAI RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein BU550
 gi|25284552|pir||B84994 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039208|dbj|BAB13242.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219624738|gb|ACL30893.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 213/384 (55%), Gaps = 31/384 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF GG
Sbjct: 7   ISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLRDFERDLSLINNRNINTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+Q
Sbjct: 67  GTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTLEYQNFIQYKNSGINRFSLGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+   
Sbjct: 127 TFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQCN 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S 
Sbjct: 187 PSHISWYQLTIEPNTVFYA----KKIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYSK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +  HNLNYW +GDYIGIG G+H ++           +K+ E    +  KN +  +  
Sbjct: 243 FNYQCQHNLNYWNFGDYIGIGCGSHGKI----------TQKNGEIIRTIKNKNINDFLSG 292

Query: 319 EFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQ---RQG 366
           ++++S  Q        E+ M   RL + I  K +      N +IE    E+N+Q   ++G
Sbjct: 293 KYINSVYQVSKRDKIFEYFMNVFRLYKPIFKKHFR----ENTNIEESFIEKNIQIAIQEG 348

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
           F+   Q      T++G   L+S++
Sbjct: 349 FLIN-QSDCWHTTKKGKNFLNSLL 371


>gi|312862665|ref|ZP_07722905.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus vestibularis F0396]
 gi|311101525|gb|EFQ59728.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus vestibularis F0396]
          Length = 378

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 207/372 (55%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++ + + E  W  +L   + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLSALIRE--W--ELLNIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I   ++  F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++         G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKKGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLHEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + +     +R
Sbjct: 300 LTKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|134300339|ref|YP_001113835.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfotomaculum reducens MI-1]
 gi|134053039|gb|ABO51010.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfotomaculum reducens MI-1]
          Length = 378

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 217/383 (56%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSI 74
           S+GVY+H PFCV+KC YCDF S+ V R +V    +++    E+ +  +  L   ++I++I
Sbjct: 2   SIGVYIHVPFCVRKCLYCDFTSYPVNREQVSL--YLRGLEKEIAYYSESLLLKEKTINTI 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    +A IL+ + +++ ++++ EIT EANP +V  +  +  R AG NR+S
Sbjct: 60  FVGGGTPTSLMSGQLASILERLDRSFYIANDAEITTEANPGTVNFSYLKDLRAAGFNRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS  ++ L  +GR HN  +A AA+  AR   F  ++ DLI+ LPKQT+ QW+  L  
Sbjct: 120 LGVQSTHQELLNEIGRIHNFEQAKAAVWQARQASFHNINLDLIFGLPKQTVKQWQQSLTE 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++    H+S Y L +E+GT      + G L    E   +++Y L   I  + G   YEI
Sbjct: 180 IINLEPQHISCYGLQLEEGTPLTCSIEQGKLEPCQEEDELEMYQLAIRILGSMGYEHYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +  HNL YW  G+Y+G+GP AHS +    ++V      + E +  ++++   
Sbjct: 240 SNFARPGYQCRHNLLYWHNGEYLGLGPAAHSHL----NQVRWGNVGNIEQYASLLKRGDI 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERV 371
              EK  LS  +Q +E + +GLR+ +G+ ++++ M  G  +    ++ + R  Q  + ++
Sbjct: 296 PREEKTILSVREQMEETVFLGLRMLKGLKLENFRMRFGLPITKVFKKEISRMEQLGLVKL 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +   L+ T++G+ + + V A   
Sbjct: 356 EDGYLKLTEKGLPLANQVFAEFV 378


>gi|293115614|ref|ZP_05792343.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Butyrivibrio crossotus DSM 2876]
 gi|292809116|gb|EFF68321.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Butyrivibrio crossotus DSM 2876]
          Length = 375

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 210/385 (54%), Gaps = 22/385 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G+YVH PFCV KC YCDF S    Y   ++ +  + + E+           + ++FFGG
Sbjct: 4   IGIYVHIPFCVSKCLYCDFLSGKSDYD-ERKLYTAAIVKEIDNFNIPWNEYKVKTLFFGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+E +    I+  + K ++   N+E T+E NP +V  +    YR++GVNRIS G+Q
Sbjct: 63  GTPSLLETELFDDIVTSLIKKFSFKKNIEFTVECNPGTVSKDKVDFYRQSGVNRISFGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L  LGR H   +   +  L  N     ++ D++ +LP QT++ ++  LQ+ L +
Sbjct: 123 SANDKELERLGRIHKFRDFERSFDLVFNSGIENINADIMSSLPCQTVSDYKRTLQKVLDF 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IE+GT FY M++ G L LP E+   D+Y +T+++ +  G + YEISN++
Sbjct: 183 PIRHISSYSLIIEEGTPFYIMNEKGTLKLPDEDEERDMYYMTETLLNEKGFNRYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN  YW+ G+YIG G GA S +    +     ++K+ E+        G+  +E
Sbjct: 243 MPGYECEHNKIYWQRGNYIGFGAGAASLMDDVRYSNVRDVKKYIENPC------GYDGIE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ----- 372
           K  LS   +  E++ +G+R+  G+S+  +  L G ++      N+ R+   + ++     
Sbjct: 297 K--LSLNDRMAEYMFLGMRMMSGVSISMFRQLFGTDM-----MNVYREPIDKHIKEGLLY 349

Query: 373 --FSRLRCTQRGMTMLDSVIANLAV 395
               RLR T++G+ + + V  +  V
Sbjct: 350 MGNDRLRLTKKGIDLSNYVFCDFLV 374


>gi|312135351|ref|YP_004002689.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor owensensis OL]
 gi|311775402|gb|ADQ04889.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor owensensis OL]
          Length = 375

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 210/382 (54%), Gaps = 24/382 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSI 74
           ++G+Y+H PFC KKC YCDF S    Y+   ++ + ++ + ++      +      I ++
Sbjct: 3   NIGLYIHVPFCRKKCYYCDFVS----YENVDDDMVFAYFSALENELIFYKENYEIEIDTV 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +  + I  +L+ I  N+ V +  EI+IEANP S+     + YRKAG+NR+S
Sbjct: 59  YIGGGTPSFVPAKYILKLLEFIYSNFNVKNTCEISIEANPESITKEKLKSYRKAGINRLS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QSL +  LR +GR H+++ A+  + +    F   S D+I  LP QT   +   L   
Sbjct: 119 VGIQSLNDTELRVIGRVHDSAVALKILSVVPLYFENFSIDVITGLPYQTFESFMQTLNTL 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L ++  HLS+Y L IE+GT  +  +++       E+    ++   +   S  GL+ YEIS
Sbjct: 179 LEFSPPHLSIYSLKIEEGTPLFNRYEEYKHSFADEDEERRMFWWARDRLSEVGLYHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YW   +YIG+G  AHS      +    +I +    ++K +++NG A
Sbjct: 239 NFAKKGFECKHNLKYWNCDEYIGVGCAAHSFFDGYRYYNTSNINE----YVKKIKENGLA 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-------NLQRQGF 367
           V  KEF+S+E+   EF+++GLR  EG S+ ++    G    IE ER        L++ G 
Sbjct: 295 VEGKEFISNEESEKEFIILGLRKIEGFSLDEFRERFG----IEFERKYKYRIEKLKKYGL 350

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           IE    +R++ T+RG+ + + V
Sbjct: 351 IEID--NRIKLTKRGIDLANLV 370


>gi|228476821|ref|ZP_04061466.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus salivarius SK126]
 gi|228251395|gb|EEK10540.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus salivarius SK126]
          Length = 378

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 208/372 (55%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E  W  +L   + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIRE--W--ELLDIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESIDSLKAAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLHEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + +     +R
Sbjct: 300 LTKSEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|317499475|ref|ZP_07957741.1| HemN C-terminal protein [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893249|gb|EFV15465.1| HemN C-terminal protein [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 382

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 217/387 (56%), Gaps = 22/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRS 70
           +N++ +Y+H PFC  KC YCDF S        +E  I ++L +++     W ++L   R 
Sbjct: 3   TNTIELYIHIPFCKSKCRYCDFCSFR-----AEEETIHAYLGKLKEELIFWGKKLAA-RD 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPS +  ++I +I + I +++ +  + EITIEANP +V++     YR+ G+
Sbjct: 57  VVTVFIGGGTPSYLRREDIQMICETIFEHFHICEDAEITIEANPGTVDLKKLCTYRENGI 116

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+QS  ++ L +LGR H   E + +   AR   F  ++ DL+ A+PKQT+T +E 
Sbjct: 117 NRISFGLQSTVKEELEYLGRIHTYEEFLQSFDWARQAGFLNINVDLMSAVPKQTLTSYEE 176

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++    + +H+S Y L IE+GT FY+ +K  +L LPSE   V +Y +T+ I + +G  
Sbjct: 177 NLRKIAKLSPEHISAYSLIIEEGTPFYEDNKLEEL-LPSEEDEVLMYRMTEKILNEYGYD 235

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G ES HNL YW +  Y+G+G  A S +          ++ + E     ++
Sbjct: 236 KYEISNYAKPGFESRHNLGYWSHIPYLGVGLNASSYLDEKRFENPSDMKDYLE-----IQ 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
             G A      LS  +Q +EF+ +GLR  +GIS K++    G ++D    + L    +QG
Sbjct: 291 SFGDAYEGARSLSVYEQMEEFMFLGLRKTKGISKKEFIERFGCSMDSVYGKPLIESMKQG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            + + +  R+  TQ G  + + V+   
Sbjct: 351 MM-KEEGDRVFLTQDGTLVSNQVLCEF 376


>gi|116627982|ref|YP_820601.1| coproporphyrinogen III oxidase [Streptococcus thermophilus LMD-9]
 gi|116101259|gb|ABJ66405.1| coproporphyrinogen III oxidase, anaerobic [Streptococcus
           thermophilus LMD-9]
          Length = 378

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 210/372 (56%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E  W  +L+  + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIRE--W--ELSDIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSHLQKNLNLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I+  ++  F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESINSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLNEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + +     +R
Sbjct: 300 LTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGMSFADTYGDIVEKLQADGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|330977076|gb|EGH77034.1| HemN family oxidoreductase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 291

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 160/265 (60%), Gaps = 5/265 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPG 281
           +  G  + HNLNYW +GD+IGIG G
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAG 291


>gi|323692759|ref|ZP_08106987.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14673]
 gi|323503201|gb|EGB19035.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14673]
          Length = 407

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 200/359 (55%), Gaps = 17/359 (4%)

Query: 9   NNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM---- 62
           NN  G   N+  L +Y+H PFCVKKC YCDF S     +V ++ +++  + E++      
Sbjct: 8   NNQAGTMENNTPLELYIHIPFCVKKCLYCDFLSFAAD-EVTRKKYVEQLIKEIETCGTRI 66

Query: 63  --RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             R       + S+F GGGTPS + P+ I  +++ + +N+ +  + EITIEANP +++  
Sbjct: 67  TGRDADAAFPVISVFIGGGTPSSLCPEQICAVMNAVKENFRLLPDAEITIEANPGTLDNK 126

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             + Y+ +G+NR+SLG+QS     LR LGR H+ +E + +  LAR   F  ++ DL+ AL
Sbjct: 127 KLRAYKNSGINRLSLGLQSANPGELRELGRIHSWNEFLESYRLAREAGFDNINVDLMSAL 186

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q+   +   L+       +H+S Y L IE+GT FY  +     VLP E     +Y+ T
Sbjct: 187 PGQSFESYADTLECVALLEPEHISAYSLIIEEGTPFYDKYSGRAEVLPDEEEDRRMYHHT 246

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +   +  G H YE+SN++  G E +HN+ YW    Y+GIG GA S ++    R ++  E 
Sbjct: 247 KEYLAEKGYHRYEVSNYARPGRECIHNVGYWTGVSYLGIGLGASSLME--GQRFSVIREM 304

Query: 300 HPESWLKMVRK---NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   +L + R+    G     +E L+ + + +EF+ +GLRL EGI+ KD++   G N++
Sbjct: 305 N--DYLDLSREELAEGRQYENREILTEQDEMEEFMFLGLRLTEGIAAKDFKKRFGLNIE 361


>gi|261405583|ref|YP_003241824.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. Y412MC10]
 gi|261282046|gb|ACX64017.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. Y412MC10]
          Length = 388

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 183/334 (54%), Gaps = 8/334 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT     +  VY+H PFC  KC YCDFNS+V + +   + ++++   EM+   Q   P  
Sbjct: 1   MTANDQRTEAVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLRALDKEMELTVQANPPGR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAG 129
           I SIF GGGTP++++P  +   L  + +++   S ++E ++EANP + ++      R+ G
Sbjct: 60  IKSIFVGGGTPTVLKPNEMEYFLQSVKRHFPEWSDSIEFSMEANPGTTDLEKLSVMRQGG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNRIS GVQ+ +   L  +GR H+  +   ++  AR   F  MS DL++ LP QT+    
Sbjct: 120 VNRISFGVQAFQNTLLTGIGRIHDTDDVYRSLDNARRAGFDNMSIDLMFGLPNQTLDMLA 179

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             + +AL   + H S+Y L +E+ TLF+ M++   L LP E   +++Y L      A G 
Sbjct: 180 ESVDKALELELPHYSIYSLKVEENTLFHTMYQRNQLPLPDEEDELNMYLLLMERMKAAGY 239

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G ES HN+ YWR  DY G+G GAH  V    H     +  + E+  K  
Sbjct: 240 KQYEISNFAKPGFESRHNMTYWRNEDYYGLGAGAHGYVGRQRHVNIKGVNPYNEAANK-- 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
              G   +E   +S E+  ++FLM+GLR+ +G+S
Sbjct: 298 ---GLPRLESFEISKEEAMEDFLMVGLRVLDGVS 328


>gi|55821243|ref|YP_139685.1| coproporphyrinogen III oxidase [Streptococcus thermophilus LMG
           18311]
 gi|55737228|gb|AAV60870.1| coproporphyrinogen III oxidase [Streptococcus thermophilus LMG
           18311]
          Length = 378

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 209/372 (56%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E  W  +L+  + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIRE--W--ELSDIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I   ++  F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLNEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + +     +R
Sbjct: 300 LTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGMSFSDTYGDIVEKLQADGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|312866178|ref|ZP_07726399.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus downei F0415]
 gi|311098582|gb|EFQ56805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus downei F0415]
          Length = 377

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 216/380 (56%), Gaps = 28/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  ++++Q+ L E ++       +++ +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DDYLQALLEEFRFY----DIKNLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + ++L G+ ++  +S+  E TIEANP  +  +  +  +K+ VNR+SLGVQ+
Sbjct: 62  TPTALSASQLEVLLLGLQESLDLSALEEFTIEANPGDLTADKVEVLQKSAVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR+HN ++   ++  L +  F  +S DLIYALP QTM Q +  +++AL+  
Sbjct: 122 FDDKELKRIGRSHNEAQIYQSVSALKQAGFDNISIDLIYALPGQTMDQVKTNVKKALALD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLSLY L +E  T+F    + G L LP+E+V  D++         HG   YEISN + 
Sbjct: 182 IPHLSLYSLILENHTVFMNKMRRGRLHLPNEDVESDMFTYIIDELEKHGFEHYEISNFTK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + GHA + +
Sbjct: 242 PGYESRHNLVYWDNVEYYGLGAGASGYLDGVRYRNRGPI----QHYLKAVAQAGHARLHE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISV--------KDWEMLAGRNL-DIECERNLQRQGFIE 369
           E L+  +Q +E + +GLR + GIS+        +D++   G+ + D+  +  LQ QG   
Sbjct: 298 EKLTKSEQMEEEIFLGLRKKSGISINRFQEKFQEDFQQRYGQIVADLLADGLLQTQG--- 354

Query: 370 RVQFSRLRCTQRGMTMLDSV 389
                ++R T+RG+ + D+V
Sbjct: 355 ----DQIRMTKRGLFLGDTV 370


>gi|219682450|ref|YP_002468834.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622183|gb|ACL30339.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 212/384 (55%), Gaps = 31/384 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF GG
Sbjct: 7   ISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLRDFERDLSLINNRNINTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+Q
Sbjct: 67  GTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTIEYQNFIQYKNSGINRFSLGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+   
Sbjct: 127 TFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQCN 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S 
Sbjct: 187 PSHISWYQLTIEPNTVFYA----KKIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYSK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +  HNLNYW +GDYIGIG G+H ++           +K+ E    +  KN +  +  
Sbjct: 243 FNYQCQHNLNYWNFGDYIGIGCGSHGKI----------TQKNGEIIRTIKNKNINDFLSG 292

Query: 319 EFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQ---RQG 366
           ++++S  Q        E+ M   RL + I  K +      N  IE    E+N+Q   ++G
Sbjct: 293 KYINSVYQVSKRDKIFEYFMNVFRLYKPIFKKHFR----ENTHIEESFIEKNIQIAIQEG 348

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
           F+   Q      T++G   L+S++
Sbjct: 349 FLIN-QSDCWHTTKKGKNFLNSLL 371


>gi|312278573|gb|ADQ63230.1| Coproporphyrinogen III oxidase, anaerobic [Streptococcus
           thermophilus ND03]
          Length = 378

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 210/372 (56%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E  W  +L+  + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIRE--W--ELSDIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I+  ++  F  +S DLIYALP QTM Q +  +++AL   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESINSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLNEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + +     +R
Sbjct: 300 LTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGMSFADTYGDIVEKLQADGLLVK-DPEVVR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + DSV
Sbjct: 359 MTKRGLFLGDSV 370


>gi|167623100|ref|YP_001673394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella halifaxensis HAW-EB4]
 gi|167353122|gb|ABZ75735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella halifaxensis HAW-EB4]
          Length = 378

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/332 (36%), Positives = 189/332 (56%), Gaps = 11/332 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q  ++ + + +++        R++ +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQHGELPQTEYVDALIKDLKQDLHYVQGRALHTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +  +IA +L  +      S N+EIT+EANP ++E ++F+ Y KAG+ R+S+GVQ
Sbjct: 67  GTPSLFDAAHIARLLTEVDTLIPFSDNIEITMEANPGTLEHDDFEAYCKAGITRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR HN  EA  A   A+ + +   + DL++ LP Q+  +   +++ A   
Sbjct: 127 SFSTDKLNLLGRIHNQDEAQVAAQKAKVSGYQSFNLDLMHGLPNQSFDEALADIETAAEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE  TL++         LP +     +Y   Q   +  G   YEIS ++
Sbjct: 187 APPHLSWYQLTIEPNTLYHSKPPQ----LPDDENLWQIYEQGQKRLAELGYQQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HNLNYW++GDY+GIG GAH +V  +  +++  +++ KHP+ +L          
Sbjct: 243 KEGYQCRHNLNYWQFGDYLGIGCGAHGKVTLLNENKIIRTVKIKHPKGYLAA----DIYT 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E   ++ E +A E+LM  LRL   I   ++E
Sbjct: 299 YETTEVAEEDRALEYLMNRLRLMSPIPKLEFE 330


>gi|119946667|ref|YP_944347.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychromonas ingrahamii 37]
 gi|119865271|gb|ABM04748.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychromonas ingrahamii 37]
          Length = 380

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 192/343 (55%), Gaps = 14/343 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  R +V ++ ++ + L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCIEKCPYCDFNSHKLRGEVPEKEYLHALLEDLSNDLVYVQGRVLETIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    I  +L  I K      N+EIT+EANP ++E      ++  G+NR S GV
Sbjct: 66  GGTPSLLSASGIGWLLTEIEKKIPFKKNMEITLEANPGAIENQKIADFKAFGINRFSFGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H   EA  A   A ++     + DL++ LP Q++     +LQ A+ 
Sbjct: 126 QSFQQDKLTKLGRIHGVEEAKTAARQAHHVGMKTFNLDLMHGLPDQSLDDALSDLQTAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T F+        VLP +++  ++    Q + + +G   YEIS +
Sbjct: 186 LNPTHISWYQLTIEPNTQFFSKPP----VLPEDDLLWEIQEKGQQLLADNGYIQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHA 314
             +G E LHNLNYW++GDYIGIG GAH ++ +   +++  +++ KHP+ +L+  R     
Sbjct: 242 GKVGFECLHNLNYWKFGDYIGIGCGAHGKLTLPLQNKILRTVKVKHPKGYLEPTRAYLDH 301

Query: 315 V--VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +  VEK  L     A E+++  LRL E +   ++E   G +L+
Sbjct: 302 INQVEKSDL-----AFEYMINRLRLFEAVPFTEFEDFTGLSLE 339


>gi|327440964|dbj|BAK17329.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046]
          Length = 381

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 209/383 (54%), Gaps = 14/383 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---ISSIFF 76
           GVY+H PFC + C YCDFN    + +   E +I++   EM+ M     P +   I +IF 
Sbjct: 4   GVYIHIPFCHQICNYCDFNKVFFKNQPVDE-YIEALGREME-MTVAQMPEAFTNIETIFL 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +  Q I  +L  I K+  +SS  E + EANP  + ++  Q     GVNR+S+G
Sbjct: 62  GGGTPTALSAQQIEKLLGLITKHIPMSSVKEFSSEANPDELTIDKLQALYNGGVNRLSMG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS ++  L  +GR H+       I  A+N+ F  +S DL+Y LP QTM QW+  L++AL
Sbjct: 122 VQSFDQSLLEKIGRTHSNEHVYETIQNAKNVGFENISIDLMYGLPGQTMEQWQETLEKAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  + H S Y L +E  T+FY  +  G L LP+E++  D+Y++      AHGL  YEISN
Sbjct: 182 ALKLPHYSAYSLIVEPKTIFYIQYAKGKLHLPTEDLETDMYSVLMDTMEAHGLKQYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN  YW   +Y G G GAH  ++   +     I+K+ E+ +   R     +
Sbjct: 242 FANEGYESTHNKIYWDNDEYAGFGAGAHGYLEGIRYSNVAPIKKYIETVMAGER----PL 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
           + +  ++++++ +E + +GLR   G++ +++E   G+   ++  E    LQ++  IE + 
Sbjct: 298 LHEHEVTADEKLEEQMFLGLRKSAGVTHEEFETKFGQPMLSIYKEIIDQLQQEQLIE-LD 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +R T++G  + + V     V
Sbjct: 357 SEGIRLTRKGRFIGNEVFQRFLV 379


>gi|329924073|ref|ZP_08279336.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. HGF5]
 gi|328940912|gb|EGG37220.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. HGF5]
          Length = 388

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/334 (35%), Positives = 183/334 (54%), Gaps = 8/334 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT     +  VY+H PFC  KC YCDFNS+V + +   + ++++   EM+   Q   P  
Sbjct: 1   MTANDQRTEAVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLRALDKEMELTVQANPPGR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAG 129
           I SIF GGGTP++++P  +   L  + +++   S ++E ++EANP + ++      R+ G
Sbjct: 60  IKSIFVGGGTPTVLKPNEMEYFLQSVKRHFPEWSDSIEFSMEANPGTTDLEKLSVMRQGG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNRIS GVQ+ +   L  +GR H+  +   ++  AR   F  MS DL++ LP QT+    
Sbjct: 120 VNRISFGVQAFQNTLLTGIGRIHDTDDVYRSLDNARRAGFDNMSIDLMFGLPNQTLDMLA 179

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             + +AL   + H S+Y L +E+ TLF+ M++   L LP E   +++Y L      A G 
Sbjct: 180 ESVDKALELELPHYSIYSLKVEENTLFHTMYQRNQLPLPDEEDELNMYLLLMERMKAAGY 239

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G ES HN+ YWR  DY G+G GAH  V    H     +  + E+  K  
Sbjct: 240 KQYEISNFAKPGFESRHNMTYWRNEDYYGLGAGAHGYVGRQRHVNIKGVNPYNEAANK-- 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
              G   +E   +S E+  ++FLM+GLR+ +G+S
Sbjct: 298 ---GLPRLESFEISREEAMEDFLMVGLRVLDGVS 328


>gi|34540292|ref|NP_904771.1| oxygen-independent coproporphyrinogen III oxidase [Porphyromonas
           gingivalis W83]
 gi|34396604|gb|AAQ65670.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Porphyromonas gingivalis W83]
          Length = 376

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 197/382 (51%), Gaps = 15/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S        +  +IQ+ + EM  +R+     +I +++FGGG
Sbjct: 3   GLYIHIPFCATRCSYCDFYSQTN--SALRSEYIQALIAEMS-IRRAEVTDTIGTLYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ PQ I  I++ + + ++ SS+ EIT+EANP  +  +  Q  R   +NRIS+G QS
Sbjct: 60  TPSLLSPQEIGRIIEQVYRLFSFSSDAEITLEANPDDLNTSYVQELRTLPINRISMGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L FL R HNA + + A+   RN     +S DLIY LP QT  +W+  +   L+ +
Sbjct: 120 FHDEDLHFLNRRHNARQVLEAVDTCRNAGLTNLSIDLIYGLPGQTPARWQENISAVLALS 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS Y L  E+GT   ++   G +    E V+++L+ + +   +  G   YEISN + 
Sbjct: 180 PPHLSAYHLIYEEGTPLTRLLHAGKVREVDEEVSLELFRMLREQLTGAGYEHYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV--RKNGHAVV 316
            G  S HN +YW+   Y+G+GP AHS     + R       +P    + +     G  + 
Sbjct: 240 SGYHSCHNSSYWQDTPYLGLGPSAHSFDGRRTRR------SNPSDIRRYIVSMAAGKPLF 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
            +E L+   + +E +M  LR   G+S      L G+     C R      R G +     
Sbjct: 294 TEEILTDNDRYNEVVMTRLRTACGLSPDQIGHLFGKESAERCIRTAAPFIRDGLLHEEAD 353

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            R+R T++G+ + D +I+   +
Sbjct: 354 GRIRLTEKGIFLSDRIISEFFI 375


>gi|149927824|ref|ZP_01916075.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Limnobacter sp. MED105]
 gi|149823446|gb|EDM82677.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Limnobacter sp. MED105]
          Length = 436

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/398 (33%), Positives = 215/398 (54%), Gaps = 33/398 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV------RRYKV-----GQENFIQSFLTEMQ--WMRQ 64
            L +Y+H P+CV+KCPYCDFNSH+      R   V     G++ F +S   ++Q  ++  
Sbjct: 39  PLALYIHLPWCVRKCPYCDFNSHLAPESKLREVGVPLVASGEQGFAESLPLDLQRRYLNA 98

Query: 65  LTGP----------RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
           L             R + SIF GGGTPSL  P+ I  +L  +     +  + EIT+EANP
Sbjct: 99  LIADLDQQLPKIWGRKLYSIFIGGGTPSLFAPELIDELLGAVRARLGMPQSGEITMEANP 158

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD 174
            + E   F+G+RKAGVNR+S+GVQS  +  L+ LGR HN+ +A+AA+  A  +F  ++ D
Sbjct: 159 GTFEQARFEGFRKAGVNRLSIGVQSFSDSHLKALGRVHNSHQALAAVSSAVALFEEVNID 218

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+YALP Q + Q   ++ +A++    HLSLYQLT+E  TLF          LP ++  +D
Sbjct: 219 LMYALPNQNVEQALADVAQAVALNSTHLSLYQLTMEPNTLFAAKPPP----LPDDDTLID 274

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           +         + G   YEIS  +  G    HNLNYW +GDY+GIG GAH+++   +    
Sbjct: 275 IEEAVHKAAKSAGFEQYEISAFAKPGHRCQHNLNYWGFGDYLGIGAGAHAKISYPNRIER 334

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            +  ++P ++++ +       +E   L+ ++   EF++  LRL +G+    +    GR L
Sbjct: 335 ETRHRNPMAYMEEMEGAAQP-LEVRTLAVKELPFEFMLNALRLIDGVPESWFVERCGRPL 393

Query: 355 DIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSV 389
             + ++ L++   +G IE  Q    + T+ G   L+ +
Sbjct: 394 S-DLQKPLKQALTKGLIE-TQPGLFKPTELGFRFLNDL 429


>gi|188995358|ref|YP_001929610.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas gingivalis ATCC 33277]
 gi|188595038|dbj|BAG34013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas gingivalis ATCC 33277]
          Length = 376

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 198/381 (51%), Gaps = 13/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S        +  +IQ+ + EM  +R+     +I +++FGGG
Sbjct: 3   GLYIHIPFCATRCSYCDFYSQTN--SALRSEYIQALIAEMS-IRRAEVTDTIGTLYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ PQ I  I++ + + ++ SS+ EIT+EANP  +  +  Q  R   +NRIS+G QS
Sbjct: 60  TPSLLSPQEIGRIIEQVYRLFSFSSDAEITLEANPDDLNTSYVQELRTLPINRISMGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L FL R HNA + + A+   RN     +S DLIY LP QT  +W+  +   L+ +
Sbjct: 120 FHDEDLHFLNRRHNARQVLEAVDTCRNAGLTNLSIDLIYGLPGQTPARWQENISAVLALS 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS Y L  E+GT   ++   G +    E V+++L+ + +   +  G   YEISN + 
Sbjct: 180 PSHLSAYHLIYEEGTPLTRLLHAGKVREVDEEVSLELFRMLREQLTGAGYEHYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS-IEKHPESWLKMVRKNGHAVVE 317
            G  S HN +YW+   Y+G+GP AHS     + R   S I ++  S        G  +  
Sbjct: 240 SGYHSRHNSSYWQDTPYLGLGPSAHSFDGRRTRRCNPSDIRRYIVSM-----AAGKPLFT 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           +E L+   + +E +M  LR   G+S      L G+     C R      R G +      
Sbjct: 295 EEILTDNDRYNEVVMTRLRTACGLSPDQIGHLFGKESAERCIRTAALFIRDGLLHEEADG 354

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+R T++G+ + D +I+   +
Sbjct: 355 RIRLTEKGIFLSDRIISEFFI 375


>gi|317486851|ref|ZP_07945663.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
 gi|316921890|gb|EFV43164.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
          Length = 381

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/380 (36%), Positives = 203/380 (53%), Gaps = 17/380 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGG 78
           +Y+H PFC +KC YC F S+ + R       ++ +   E+ QW R+L G   + S+FFGG
Sbjct: 3   LYIHVPFCRRKCRYCAFYSNPLARSGDEMAVYLSALYAELGQWGRRL-GRVPVESVFFGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV-NNFQGYRKAGVNRISLGV 137
           GTPSL++P  +  +LD + + + V    EI++EANP S+       G+  AGVNRISLGV
Sbjct: 62  GTPSLLDPDQLEGVLDCVGRTFEVLPGAEISMEANPDSLHTAEKASGFLAAGVNRISLGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL +  L  LGR H A+ A  A    R      +S DL++ LP QT+ QW  + + A++
Sbjct: 122 QSLHDGMLETLGRLHRANAAREAFRAIREAGCANLSLDLMWGLPGQTLEQWLEDARAAIA 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y LT+E GT   +    GD  LPSE+V   +Y     +    GLH YE+SN 
Sbjct: 182 LGPEHISAYGLTLEPGTPLAE--SCGDAELPSEDVQCAMYLEGIRLFEEAGLHHYEVSNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G    HNL YW   DY+G+GP A S   +G  R         E WL+ VR+ G    
Sbjct: 240 ARDGFRCRHNLGYWEGRDYLGVGPAATS--TIGGERW---TNPEGEGWLEQVRE-GRRCP 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
           E E L    +A E +M+ LR  +G+ +  +E LAGR+   +       L  +G + R++ 
Sbjct: 294 EWEPLDRATRALELMMLRLRTVDGLPLDAYESLAGRSFLGDHGPFAHRLCAEG-LARMEN 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
              R T  GM + +S++  L
Sbjct: 353 GVFRLTDEGMLVSNSILGEL 372


>gi|322418113|ref|YP_004197336.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M18]
 gi|320124500|gb|ADW12060.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M18]
          Length = 381

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 162/267 (60%), Gaps = 3/267 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGG 78
           G+Y+H+PFC+KKC YCDFNS         E +++  L EM+   + L  P    +++ GG
Sbjct: 4   GLYIHFPFCLKKCLYCDFNSTAWSGDEPAE-YVELLLREMELREKALPEPVQAPTLYLGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +  +++   + + +  + E+T+EANP ++      GYR AGVNR+SLG+Q
Sbjct: 63  GTPSLMAPELVGRLIEQAVQRFGLKPDAEVTLEANPGTLTPERLSGYRAAGVNRLSLGIQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S EE+ L+ LGR H   EA+ A   AR   F  +S DL+++LP Q++ QW   L++ ++ 
Sbjct: 123 SFEERLLQRLGRVHTVHEAVGAFEQARAAGFDNISIDLMHSLPGQSLKQWRAALRKGIAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L++E+GT F ++++ G+L LP E     ++  T    +A G   YEISN +
Sbjct: 183 GPEHISAYALSVEEGTPFERLYERGELPLPGEEEGARMFEATSECLAAAGYLHYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS 284
             G  S HNL+YW    Y+G G GAHS
Sbjct: 243 RPGRFSRHNLSYWSRQSYLGFGAGAHS 269


>gi|315645951|ref|ZP_07899072.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           vortex V453]
 gi|315278712|gb|EFU42026.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           vortex V453]
          Length = 388

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/349 (34%), Positives = 190/349 (54%), Gaps = 12/349 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  KC YCDFNS+V + +   + ++ +   EM+   +   P  I SIF GGG
Sbjct: 10  AVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLHALDKEMELTVKANPPGIIKSIFVGGG 68

Query: 80  TPSLIEPQNIALILDGIAKN---WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           TP++++P  +A  L  + ++   WT   ++E ++EANP + ++      R+ GVNRIS G
Sbjct: 69  TPTVLKPNEMAYFLQSVRRHFPEWT--EDIEFSMEANPGTTDLEKLSVMREGGVNRISFG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ +   L  +GR H+  +   ++  AR   F  MS DL++ LP QT+      + +AL
Sbjct: 127 VQAFQNSLLTGIGRIHDTDDVYRSLDNARQAGFDNMSIDLMFGLPNQTLEMLAESVDKAL 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  + H S+Y L +E+ TLF+ M++   L LP E   +++Y L      A G   YEISN
Sbjct: 187 ALGLPHYSIYSLKVEENTLFHTMYQRNQLPLPDEEDELNMYLLLMERMKAAGYKQYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN+ YWR  DY G+G GAH  V    H     +  + E+  K     G   
Sbjct: 247 FAKPGFESRHNMTYWRNEDYYGLGAGAHGYVGRQRHVNIKGVNPYNEAANK-----GLPR 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           +E   +S E+  ++FLM+GLR+ +G+S   ++   G  ++ E  R L +
Sbjct: 302 LESFEVSREEAMEDFLMVGLRVLDGVSRTRFQQQFGVPMEQEFARPLDK 350


>gi|119716130|ref|YP_923095.1| coproporphyrinogen III oxidase [Nocardioides sp. JS614]
 gi|119536791|gb|ABL81408.1| coproporphyrinogen III oxidase, anaerobic [Nocardioides sp. JS614]
          Length = 426

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 203/395 (51%), Gaps = 22/395 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--------YKVGQENFIQSFLTEMQWMRQLT 66
           G    G YVH PFC  +C YCDFN++               +  + ++ + E++  RQ+ 
Sbjct: 36  GERGFGFYVHVPFCTVRCGYCDFNTYTAEELGPAGGAPGASRATYAEAAIAEVRRARQVL 95

Query: 67  GPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           G     ++++FFGGGTP+L+ P ++  +L  I   + ++ +VE+T EANP SV + + + 
Sbjct: 96  GDTDLPVNTVFFGGGTPTLLGPADLGAVLAAIGAEFGLADDVEVTTEANPDSVALWDLEE 155

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R AG  R+S G+QS  +  LR L R H+     A +  AR   F ++S DLIY  P ++
Sbjct: 156 LRAAGFTRLSFGMQSAVDHVLRVLDRTHDPLRVPAVVDWARQAGFEQISLDLIYGTPGES 215

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W++ ++ AL+   +H+S Y L +E+GT   +  K G+L +P E+   D Y L     
Sbjct: 216 VADWDVSVEAALACGPEHVSAYSLIVEEGTALARRVKRGELPMPDEDDLADKYLLVDDRL 275

Query: 244 SAHGLHAYEISN-----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           +A GL  YE+SN          +   HNL YW  GD+ G+GPGAHS V      V     
Sbjct: 276 AAAGLEWYEVSNWARGRDDNTASRCRHNLLYWTGGDWWGVGPGAHSHVG----GVRWWNV 331

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + +         +E L  E +  E +++ LRLR+G+ V+  +      +    
Sbjct: 332 KHPAAYAERIAAGRSPAHAREVLDEESRRVERVLLELRLRDGLPVEVLDESGRAAVPDLV 391

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            R+L  +  +      RL  T+RG  + D+V+ +L
Sbjct: 392 ARDLITE--LATDDGHRLVPTRRGRLLADAVVRDL 424


>gi|163749430|ref|ZP_02156678.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella benthica KT99]
 gi|161330839|gb|EDQ01766.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella benthica KT99]
          Length = 378

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 183/340 (53%), Gaps = 19/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ +I + L +++        R I +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQNGELPQQEYIDALLADLKNDLHYVQGREIHTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  +L G+ +    S  +EIT+EANP ++E ++F+ Y KAGV R+S+GVQ
Sbjct: 67  GTPSLFDAAQIERLLTGVNEMIPFSEQIEITMEANPGTLEHDDFEAYSKAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EA  A   A++  +   + DL++ LP Q+  +   ++  A   
Sbjct: 127 SFSTDKLNLLGRIHGKDEAKVAAQKAQSSGYRSFNLDLMHGLPNQSFEEAMADIDTAAKL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE+ TLF+         LP +     +Y   Q   +  G   YEIS ++
Sbjct: 187 SPPHLSWYQLTIEQNTLFHSKPPQ----LPDDEALWHIYEQGQKKLAELGYEQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAV 315
             G +  HN+NYW++GDY+GIG GAH +V +   +  +     KHP+ +L        A 
Sbjct: 243 KPGFQCQHNINYWQFGDYLGIGCGAHGKVTLLEQKQILRTVKIKHPKGYL--------AA 294

Query: 316 VEKEFLSSEQQAD----EFLMMGLRLREGISVKDWEMLAG 351
            E  F + E   D    E+LM   RL   I   ++E   G
Sbjct: 295 DEYTFDTIEVTEDERPLEYLMNRFRLMSAIPKAEFEQRTG 334


>gi|312110165|ref|YP_003988481.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y4.1MC1]
 gi|311215266|gb|ADP73870.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y4.1MC1]
          Length = 380

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 206/377 (54%), Gaps = 15/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y H PFC + C YCDFN   + +  GQ  + ++Q+   EM+   +      + ++F GG
Sbjct: 5   AYFHIPFCAQICYYCDFN---KVFFHGQPVDEYLQAMEKEMKRTMEAFPADRLDTLFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+++E + +   L  I K++  S+  VE T EANP+ +     Q  ++AGVNR+S GV
Sbjct: 62  GTPTVLEMKQLDFFLQSIYKHFRFSAAEVEFTFEANPNELSKEKLQLLKEAGVNRLSFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++  L+ +GR H   + I  I LA+ I F  +S DL+Y LP+QT+ Q+  +L+ A S
Sbjct: 122 QTFDDALLKAIGRTHRYEDVIKTIALAKEIGFENISIDLMYGLPRQTVAQFLTDLEIAFS 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H+S Y L IE  T+FY + + G L+LPSE     +Y         H  H YEISN+
Sbjct: 182 LDVQHISAYSLIIEPKTVFYNLMRKGKLLLPSEEEEAKMYEEAMRQMEMHDYHQYEISNY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +S HNL YW   +Y GIG GAHS V  G  R  +   K    ++  V + G   +
Sbjct: 242 ARPGFQSRHNLTYWNNEEYYGIGAGAHSYVG-GVRRANVRPIK---KYIAKVEETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DI--ECERNLQRQGFIERVQF 373
           E   ++  +Q +E + +GLR  EG+S + +    G ++ D+  +     +++G +E  + 
Sbjct: 298 EAHHVTKSEQMEEEMFLGLRKTEGVSKQRFFEKFGMSIPDVFGQAVAREKQKGLLEETE- 356

Query: 374 SRLRCTQRGMTMLDSVI 390
           + +R TQRG  + + V 
Sbjct: 357 THIRLTQRGKLLGNEVF 373


>gi|220905467|ref|YP_002480779.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869766|gb|ACL50101.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 484

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/389 (34%), Positives = 213/389 (54%), Gaps = 19/389 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEM-QWMRQLTGPR 69
           N + VY+H PFC  +C YC F S      V         +++ +   E+  W  +L G  
Sbjct: 13  NPMLVYIHVPFCSTRCRYCAFYSSPLGRGVDPVSSPAVRDYVDTLFMELAHWGDRLGG-S 71

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKA 128
            + ++FFGGGTPSL+ P+ IAL+++ + + +T+    E+T+EANP S+   +    Y +A
Sbjct: 72  PVQTVFFGGGTPSLLPPRVIALVMERLGRYFTLVPKAEVTLEANPESLRGGHRVAQYLEA 131

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR+S+G+QSL+E  LR LGR H A +++ A  LAR      ++ DL++ LP Q++ QW
Sbjct: 132 GVNRLSIGIQSLDEGMLRMLGRPHKAQDSLHAAFLAREAGCANINVDLMWGLPGQSVRQW 191

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  +  + DH+S Y LT+E GT      ++G L+LP E     ++    ++   HG
Sbjct: 192 LQTLKDVMRMSPDHISAYGLTLEPGTPLELDVEEGRLMLPPERDQNIMFMEGAALLEQHG 251

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN + +G +  HNL YW   DY+G+GP A S   +G  R      +  ++W   
Sbjct: 252 YLHYEISNFARMGFQCRHNLGYWEGEDYLGLGPSATS--TIGGRRWTNPASQ--KAWDVR 307

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQR 364
            R+ G    + E L+ + +  E LM+ LR   G+ VK +  + GR+   + +R    L  
Sbjct: 308 TRE-GSLGQDVEELTPQTRVLELLMLRLRTTRGLRVKAYREMTGRDFVRDHQRLVQALHE 366

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G I R++   LR T+ GM + +S+++NL
Sbjct: 367 NGLI-RIRNGYLRLTRSGMLVSNSILSNL 394


>gi|312876834|ref|ZP_07736811.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796349|gb|EFR12701.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 375

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 210/382 (54%), Gaps = 24/382 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSI 74
           ++G+Y+H PFC KKC YCDF S    Y+   ++ + ++ + ++      +      I +I
Sbjct: 3   NIGLYIHVPFCKKKCYYCDFVS----YENVDDDMVFAYFSALKNELIFYKENYEIEIDTI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +  + I  +L+ I  N+ V S  EI+IEANP S+     + YR+AG+NR+S
Sbjct: 59  YIGGGTPSFVPAKYILKLLEFIYSNFKVKSTCEISIEANPESITKEKLKSYREAGINRLS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QSL +  +R +GR H++  A+  +      F   S D+I  LP QT   +   L   
Sbjct: 119 VGIQSLNDAEVRAIGRIHDSEVALKILSRVPLYFENFSVDVIIGLPYQTFESFSQTLNTL 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L ++  HLS+Y L IE+GT  ++ +++   +LPSE+    ++   +   S  GL+ YEIS
Sbjct: 179 LKFSPPHLSIYSLKIEEGTPLFERYEEYKSLLPSEDEERRMFWWARDRLSEVGLYHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +    E  HNL YW   +YIG+G  AHS  +   +    +I+++       +++NG A
Sbjct: 239 NFAKKDFECKHNLKYWNCDEYIGVGCAAHSFFEDCRYYNTSNIKEYTNK----IKENGLA 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF- 373
           V  KE +SSE+   EF+++GLR  EG S+ ++         IE ER  + Q  IE+++  
Sbjct: 295 VEGKELISSEESEKEFIILGLRKIEGFSLDEFR----ERFAIEFERKYKSQ--IEKLKKY 348

Query: 374 ------SRLRCTQRGMTMLDSV 389
                  R++ T+RG+ + + V
Sbjct: 349 GLIDINGRIKLTERGIDLANLV 370


>gi|312144018|ref|YP_003995464.1| oxygen-independent coproporphyrinogen III oxidase [Halanaerobium
           sp. 'sapolanicus']
 gi|311904669|gb|ADQ15110.1| oxygen-independent coproporphyrinogen III oxidase [Halanaerobium
           sp. 'sapolanicus']
          Length = 384

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/376 (33%), Positives = 198/376 (52%), Gaps = 13/376 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KCPYCDF S V   K   + +  +   E+  + +    + + SI+ GGG
Sbjct: 12  ALYIHIPFCHSKCPYCDFYS-VEYNKKRVDLYWAALFKELDDIIKSVDNKLLRSIYIGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSLI  + I ++L+ I  ++ +    EITIEANP S+       Y+++G+NRISLGVQS
Sbjct: 71  TPSLICGEKIFILLNKIRNSFNLPPTAEITIEANPFSLNEEKIILYKRSGINRISLGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              + L FLGRN    + I AI L +  F   S DLI+ALP Q++  ++ +L+   S+  
Sbjct: 131 FNNKYLNFLGRNSTRKKNINAIKLLKKYFDNYSIDLIFALPGQSVKDFKKDLEVLTSFNP 190

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L I + T FY     G+  LP++ +  ++YNL Q        + YEISN +  
Sbjct: 191 PHISLYNLEIHEQTPFYDKLNKGEFKLPADKIDAEMYNLAQQFLLKADYNNYEISNFAKS 250

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  + HN  YW Y  YIG+GPGA        ++    + K+ +S+      + H  +EKE
Sbjct: 251 GYRAQHNYLYWNYKRYIGLGPGAAGFNGRIRYKNNADLNKYLKSF------SDHLEIEKE 304

Query: 320 --FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              LS E    E+  + LR + G+S+  + +   ++ +    +   NL+R+  +E     
Sbjct: 305 INILSKEDMMAEYCFLALRTQAGVSLHRFNLKFKKDFNSIFRDSVDNLKRKSLLEESN-Q 363

Query: 375 RLRCTQRGMTMLDSVI 390
           R+  T +G  + + V 
Sbjct: 364 RIYLTAKGKLLANEVF 379


>gi|297584659|ref|YP_003700439.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           selenitireducens MLS10]
 gi|297143116|gb|ADH99873.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           selenitireducens MLS10]
          Length = 382

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 181/330 (54%), Gaps = 7/330 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
            +Y+H PFC + C YCDFN    + +   E +++  +TEM  +  +      + S++ GG
Sbjct: 4   AIYIHIPFCEQICHYCDFNKFYLKSQPVDE-YVEDLITEMGIYADEHDEKEPVQSVYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +A ++  + + + +S + E T+EANP S + +  +G   AGVNR+S+GVQ
Sbjct: 63  GTPTSMSEKQLAKVIHDVRELFPLSESCEFTVEANPGSCDASMMKGLYNAGVNRLSIGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +E  L  + R+H   +A   + +AR      +S DL++ LP QTM QW+  L+ ALS 
Sbjct: 123 TFDETLLSAINRDHEPGDAQKTVDMAREAGITNLSIDLMFGLPGQTMEQWKQTLKAALSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IE  T+FY+M K   L LP E++  D++    +     G   YEISN +
Sbjct: 183 PITHISAYSLKIEPKTVFYQMQKKRQLRLPDEDLEADMFEELVANAKRTGFQHYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GAH  +    +     + K    ++K V        E
Sbjct: 243 KPGFESRHNLVYWDNCEYYGFGAGAHGYLNGKRYANHGPLPK----YMKAVSAGERPKRE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           +  +SS+ Q +EF+ MGLR   G+S+ D+E
Sbjct: 299 EHQVSSDAQKEEFMFMGLRKMAGVSLDDFE 328


>gi|255656448|ref|ZP_05401857.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-23m63]
 gi|296450106|ref|ZP_06891868.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP08]
 gi|296878487|ref|ZP_06902493.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP07]
 gi|296261114|gb|EFH07947.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP08]
 gi|296430571|gb|EFH16412.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP07]
          Length = 391

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 206/394 (52%), Gaps = 33/394 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV------RRY----KVGQENFIQSFLTEMQWMRQ---- 64
           LG+YVH PFCVKKC YCDFNS+       +RY    K+  E +      + ++  +    
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDLKKRYIEDLKIEMELYSNKLYKDNKYKNKECCS 61

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   + 
Sbjct: 62  LNKNDKITSIFVGGGTPSILTSDEIREVFMSIKEMFYIDDNAEITIECNPGTLTLEKLKT 121

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            +  G+NR+S+G+Q+++E+ L F+GR H   E       A ++ F  ++ DL+Y+LP QT
Sbjct: 122 MKDIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINIDLMYSLPNQT 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W+  L++ +     H+S Y L +E+GT  Y M++     L  EN+ +++Y  T +  
Sbjct: 182 LCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENIDIEMYEYTINYL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S+E +  S
Sbjct: 242 MSKGYNQYEISNYSKEGFNCKHNILYWECKPYIGIGAGASGYINENRYNNVESLEDYHLS 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--------RNLD 355
            +K  +     + E E LS +   +E + MGLR+ +GI  +D++   G        + ++
Sbjct: 302 LVKREK----PIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFGIDFKDKYSKQIE 357

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +   R L  Q F E +Q      TQ+G  + +SV
Sbjct: 358 MLSARKLINQSF-EGIQL-----TQKGREISNSV 385


>gi|154496242|ref|ZP_02034938.1| hypothetical protein BACCAP_00527 [Bacteroides capillosus ATCC
           29799]
 gi|150274325|gb|EDN01402.1| hypothetical protein BACCAP_00527 [Bacteroides capillosus ATCC
           29799]
          Length = 409

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 201/383 (52%), Gaps = 14/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  LG+Y+H PFC  KC YCDF S   R +   +++ ++ L  ++          + +I+
Sbjct: 2   TEKLGIYIHIPFCRSKCDYCDFYSLSGR-EDRMDDYQKALLAHIKETAPFAKGYQVDTIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS    + IA ++  + K + VS   E+T+EANP SV+V   +  R+AGVNR+SL
Sbjct: 61  FGGGTPSFYGEKRIAELVRAVKKRFDVSREAEVTMEANPDSVDVKMLRRLRRAGVNRLSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+  +Q LR + R H   +   A+  AR      +S DLIY LP Q M  W+  +++ 
Sbjct: 121 GAQTACDQELRAIHRPHTFEQTCQAVAAAREAKIKNLSLDLIYGLPGQDMASWQESVEQI 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   +HLS Y L +E+GT  ++    G+ VLP ++   D+Y          G   YEIS
Sbjct: 181 LALKPEHLSCYGLKVEEGTPLWQRVSRGE-VLPDDDTQADMYLWMVDRLEREGYRQYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +S HNL YW    Y+G+GPGAHS    G  R   S  K  + ++  V + G  
Sbjct: 240 NFAKCGCQSRHNLKYWMGKPYLGLGPGAHS--DFGGRRY--SFIKDLDGYISGVLEGGTV 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNL---QRQGFIER 370
           + E E +   ++  E+LM+ +R   GI  ++WE      ++ E  E+ L   +  G+  R
Sbjct: 296 IDESELIPKRERGGEYLMLRMRTTRGI--EEWEYRRQYYMNFEPIEQKLAEFEHHGWAAR 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
            Q +R   T +G  + + +I  L
Sbjct: 354 -QDTRWHFTPQGFLISNQLIGEL 375


>gi|114669329|ref|XP_001170144.1| PREDICTED: radical S-adenosyl methionine domain containing 1
           isoform 1 [Pan troglodytes]
          Length = 372

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 197/347 (56%), Gaps = 18/347 (5%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           +  +TE Q + +L+G + + S+FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EA
Sbjct: 3   KCLVTEAQTLLRLSGVQRVESVFFGGGTPSLASPHTVAAVLEAVAQTAHLPADSEVTLEA 62

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RM 171
           NP+S   +    +  AGVNR+S+G+QSL++  LR LGR H+A +A+  +  AR +FP R+
Sbjct: 63  NPTSAPGSRLAEFGAAGVNRLSIGLQSLDDTELRLLGRMHSACDALRTLAEARRLFPGRV 122

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DL+  LP Q +  W  +LQ  L +  DHLSLYQL++E+GT  +   + G L  P   +
Sbjct: 123 SVDLMLGLPAQQVGLWLGQLQELLHHCDDHLSLYQLSLERGTALFAQVQRGALPAPDPEL 182

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KV 288
           A ++Y   +++    G H YE+SN +  GA S HN  YW+ G Y+GIGPGAH R      
Sbjct: 183 AAEMYQRGRAVLREAGFHQYEVSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFMPQGA 242

Query: 289 GSHRVAISIEK-HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           G H     I+   P++W+K V   GH   ++  L   +  +E L +GLR   GI+ + W+
Sbjct: 243 GGHTREARIQTLEPDNWMKEVMLFGHGTRKRVPLGRLELLEEVLALGLRTDVGITHQHWQ 302

Query: 348 MLA---------GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
                       G N +++    L  +G ++ +    LRC+  G+ +
Sbjct: 303 QFEPQLTLWDVFGANKEVQ---ELLERGLLQ-LDHRGLRCSWEGLAV 345


>gi|295399233|ref|ZP_06809215.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978699|gb|EFG54295.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 383

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/376 (34%), Positives = 206/376 (54%), Gaps = 15/376 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           Y H PFC + C YCDFN   + +  GQ  + ++Q+   EM+   +      + ++F GGG
Sbjct: 9   YFHIPFCAQICYYCDFN---KVFFHGQPVDEYLQAMEKEMKRTMEAFPADRLDTLFVGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++E + +   L  I K++  S+  VE T EANP+ +     Q  ++AGVNR+S GVQ
Sbjct: 66  TPTVLEMKQLDFFLQSIYKHFRFSAAEVEFTFEANPNELSKEKLQLLKEAGVNRLSFGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++  L+ +GR H   + I  I LA+ I F  +S DL+Y LP+QT+ Q+  +L+ A S 
Sbjct: 126 TFDDALLKAIGRTHRYEDVIKTIALAKEIGFENISIDLMYGLPRQTVAQFLTDLEIAFSL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y L IE  T+FY + + G L+LPSE     +Y         H  H YEISN++
Sbjct: 186 DVQHISAYSLIIEPKTVFYNLMRKGKLLLPSEEEEAKMYEEAMRQMEMHDYHQYEISNYA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +S HNL YW   +Y GIG GAHS V  G  R  +   K    ++  V + G   +E
Sbjct: 246 RPGFQSRHNLTYWNNEEYYGIGAGAHSYVG-GVRRANVRPIK---KYIAKVEETGFPYLE 301

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DI--ECERNLQRQGFIERVQFS 374
              ++  +Q +E + +GLR  EG+S + +    G ++ D+  +     +++G +E  + +
Sbjct: 302 VHHVTKSEQMEEEMFLGLRKTEGVSKQRFFEKFGMSIPDVFGQAVAREKQKGLLEETE-T 360

Query: 375 RLRCTQRGMTMLDSVI 390
            +R TQRG  + + V 
Sbjct: 361 HIRLTQRGKLLGNEVF 376


>gi|288942741|ref|YP_003444981.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
 gi|288898113|gb|ADC63949.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
          Length = 395

 Score =  216 bits (549), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 203/405 (50%), Gaps = 46/405 (11%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQW-----MRQLTGPRSI 71
            L +YVH P+CV+KCPYCDFNSH      G+E+    +++  +Q      +R+    R I
Sbjct: 10  PLALYVHLPWCVRKCPYCDFNSH----PGGRESRPFDAYVERLQLDLDAELREPAARRPI 65

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSL     I  +LDGI     +  + EIT+EANP +++  +F  YR+AG+N
Sbjct: 66  GSIFIGGGTPSLFPGPAIRRLLDGIRARVELIPDAEITLEANPGTIDAAHFAAYREAGIN 125

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQSL  + L  LGR H   EA  A+ +AR + F  ++ DL++ LP QT+     +
Sbjct: 126 RLSIGVQSLSTEQLERLGRIHTPEEAREAVRIARALGFDNLNLDLMFGLPGQTLDGARAD 185

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   ++   +H+S YQLT+E GT F     +    LP  ++  D+     +   + G   
Sbjct: 186 LDALIALEPEHVSYYQLTVEPGTAFGARPPE----LPDGDLVADMGAEGAARLESAGYGR 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS---------IEK-- 299
           YE+S ++  G +  HNLNYWR+GDY+GIG GAH   K+ + R              EK  
Sbjct: 242 YEVSAYARRGRQCRHNLNYWRFGDYLGIGAGAHG--KLSAQRAPTESTMPWRVWRTEKPV 299

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK--------DWEMLAG 351
           HP  +L         V  +  LS      EF++  LRL +G             W  +A 
Sbjct: 300 HPNLYLNADPSQPLGV--RRDLSEADLILEFVLNALRLTDGFEPDLFTATTGLPWSRIAA 357

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN-LAV 395
           R      +R L        +   R+  T  G   LD ++A  LAV
Sbjct: 358 RLQAAADDRLLS-------LDPDRVAPTPLGRDFLDDLVARFLAV 395


>gi|332883638|gb|EGK03919.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           mossii DSM 22836]
          Length = 376

 Score =  216 bits (549), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 210/379 (55%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF  + R     + +++ +   E++  +   G   + +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDF--YTRTDMSPKYDYVSALCEEIKLRKNYIGDEDVKTVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQ 138
           TPS +   +   I + +   + ++ + EIT+EANP  +  +     + K   NR+S+G+Q
Sbjct: 61  TPSQLSESDFLRIFETLHHEFRIAPDAEITMEANPDDLSAHYLATLKEKLPFNRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L+FL R H+A +A  A+ + +++ +  +S DL+Y LP QTM  WE  L+ A++ 
Sbjct: 121 SFDDEELKFLKRRHSADKAKEAVRMCQSLGYNNISIDLMYGLPNQTMQIWERNLEEAIAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y L  E+GT  Y++ K GD+    E+++VD+++      +A G   YEISN +
Sbjct: 181 DVQHISSYHLIYEQGTRLYRLFKMGDVNPVDEDLSVDMFSRMIEKLTAAGFDHYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G+GP AHS           SI K+ E       +  +  +E
Sbjct: 241 RHGLYSKHNSSYWLGKKYLGLGPAAHSYDGQNRSWNVASISKYIEGI-----RTENPNLE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
            E L    + ++F++ G+R + G+++ + E L G  +   C +N ++   QGF+     +
Sbjct: 296 IEALDENTKYNDFILTGMRTKWGVNLSELESLFGTKMKAFCLKNARKYLDQGFLTEKD-N 354

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L+ T++G+ + D ++++L
Sbjct: 355 ILKLTRQGIFISDGIMSDL 373


>gi|332535501|ref|ZP_08411279.1| radical SAM family enzyme [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035078|gb|EGI71594.1| radical SAM family enzyme [Pseudoalteromonas haloplanktis ANT/505]
          Length = 378

 Score =  216 bits (549), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 186/339 (54%), Gaps = 18/339 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH P+CV+KCPYCDFNSH ++ ++ +  ++Q  + +++    L   R I SIF GG
Sbjct: 6   LSLYVHVPWCVQKCPYCDFNSHGQKGEIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+       +L+ +     +  + EIT+EANP +VE   F+ Y KAG+NRIS+GVQ
Sbjct: 66  GTPSLLTGAAYTRLLNEVDNLIGLEEHCEITLEANPGTVETGRFKDYVKAGINRISIGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S++   L+ LGR H + EA  A   A+       + DL++ LP QT+     +L++ ++ 
Sbjct: 126 SMQNDKLKALGRIHGSDEANYAAQQAKEAGLNSFNLDLMHGLPGQTLDDALSDLKQIIAL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T F          LP +    D+      + +  G   YEIS ++
Sbjct: 186 DPPHISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGVELLAQAGYVQYEISGYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVR----KN 311
             G +  HNLNYWR+GDY+GIG GAH +V   +  +    E  KHP  ++ +++    K+
Sbjct: 242 KPGYQCQHNLNYWRFGDYLGIGCGAHGKVTDANTGLITRTEKVKHPRGYMDLIKPYMYKS 301

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            H  VE++ L     A EF M   RL E   + D+  L 
Sbjct: 302 WH--VEQDDL-----AFEFFMNRFRLVEPCPINDFNKLT 333


>gi|282900400|ref|ZP_06308350.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Cylindrospermopsis raciborskii CS-505]
 gi|281194713|gb|EFA69660.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Cylindrospermopsis raciborskii CS-505]
          Length = 388

 Score =  216 bits (549), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 188/331 (56%), Gaps = 15/331 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF  +V   +V  E       ++ S   E+      + P  + +
Sbjct: 8   AAYVHIPFCRRRCFYCDFPVYVTGDRVSGEASHTISQYVDSICHEISITPTFSEP--LRT 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+  + +  IL  + + + + S +EI++E +P + ++   QGY+ AGVNR+
Sbjct: 66  VFFGGGTPSLLSAKQLEQILSSLEQRFAMESKIEISMEIDPGTFDLARIQGYKNAGVNRV 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+   + L+  GR+H+  +  AAI +   +  P  S DLI  LP Q++ QW+  L 
Sbjct: 126 SLGVQTFTPELLKTAGRSHSVEDIFAAIDIVNQVEIPEFSIDLISGLPHQSIEQWQNSLT 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +  A  H+S+Y LTIE GT+F + ++ GD  LP++ + V +Y L Q + +  G   YE
Sbjct: 186 KGVEIAPTHISIYDLTIEPGTVFGRYYQAGDHPLPADEMTVKMYELGQEMLTGAGYEHYE 245

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW+   Y G G GA S V+         I+++ + WL     N 
Sbjct: 246 ISNYAKPGHQCKHNRVYWQNLAYYGFGMGATSYVEGKRFSRPRRIQEYYQ-WL-----NN 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            A+++ + +  +++  E +M+G+RL EG+S+
Sbjct: 300 GAIIDAKVIYVDEELLETIMLGMRLAEGLSL 330


>gi|294139808|ref|YP_003555786.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           violacea DSS12]
 gi|293326277|dbj|BAJ01008.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella violacea DSS12]
          Length = 378

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/340 (35%), Positives = 186/340 (54%), Gaps = 19/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++        R I +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHGQNGELPQQEYVDALLADLRNDLHYVQEREIHTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL +   I  +L G+ +    S  +EIT+EANP ++E ++F+ Y  AGV R+S+GVQ
Sbjct: 67  GTPSLFDAAQIERLLTGVNQMIPFSEQIEITMEANPGTLEHDDFEAYSNAGVTRLSIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EA +AA     + +   + DL++ LP Q+  +   ++  A   
Sbjct: 127 SFSTDKLNLLGRIHGKDEAEVAARKAQSSGYRSFNLDLMHGLPNQSFEEAMADIDTAAEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLS YQLTIE+ TLF+         LP +     +Y   Q   +  G   YEIS ++
Sbjct: 187 APPHLSWYQLTIEQNTLFHSKPPQ----LPDDEALWHIYEQGQKKLADLGYEQYEISAYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIE-KHPESWLKMVRKNGHAV 315
             G +  HN+NYW++GDY+GIG GAH +V  +  +++  +++ KHP+ +L        A 
Sbjct: 243 KPGFQCQHNINYWQFGDYLGIGCGAHGKVTLLEQNQILRTVKIKHPKGYL--------AA 294

Query: 316 VEKEFLSSEQQAD----EFLMMGLRLREGISVKDWEMLAG 351
            E  F + E   D    E+LM   RL   I   ++E   G
Sbjct: 295 DEYTFDTVEVTEDERPLEYLMNRFRLMSAIPKTEFEQRTG 334


>gi|291484998|dbj|BAI86073.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 379

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 197/376 (52%), Gaps = 11/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR+I F  +S DL++ LP QT+   E  +  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERARDIGFENISLDLMFGLPGQTLKHLEHSINTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEMVMSQMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S 
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-SA 357

Query: 376 LRCTQRGMTMLDSVIA 391
           +  T +G  + + V  
Sbjct: 358 VYLTHQGKLLGNEVFG 373


>gi|323180415|gb|EFZ65967.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1180]
          Length = 362

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/314 (36%), Positives = 177/314 (56%), Gaps = 11/314 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF GGGTPSL+    
Sbjct: 1   MQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIGGGTPSLLSGPA 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GVQS  E  L+ L
Sbjct: 61  MQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGVQSFSEDKLKRL 120

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+     HLS YQL
Sbjct: 121 GRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  TLF         VLP ++   D++     + +A G   YE S ++    +  HNL
Sbjct: 181 TIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKSSYQCQHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           NYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +  +  + +  +
Sbjct: 237 NYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYLESQRDVEAADK 291

Query: 327 ADEFLMMGLRLREG 340
             EF M   RL E 
Sbjct: 292 PFEFFMNRFRLLEA 305


>gi|322372731|ref|ZP_08047267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C150]
 gi|321277773|gb|EFX54842.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C150]
          Length = 378

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 207/372 (55%), Gaps = 14/372 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E  W  +L   + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIRE--W--ELLDIKELRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SLGVQ+ +
Sbjct: 64  TAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQTFD 123

Query: 142 EQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A+   + 
Sbjct: 124 DKHLRQIGRSHNQAQIYESIDSLKAAGFHNISIDLIYALPGQTMDQVKENVRKAIELDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA + +E 
Sbjct: 244 MESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHARLHEEH 299

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + +     +R
Sbjct: 300 LTKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVEKLQADGLLVK-DPDVIR 358

Query: 378 CTQRGMTMLDSV 389
            T+RG+ + D+V
Sbjct: 359 MTKRGLFLGDNV 370


>gi|304316640|ref|YP_003851785.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778142|gb|ADL68701.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 376

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 195/335 (58%), Gaps = 6/335 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC +KC YCDFNS+    K   E F  + + E++  R+       +SI+ GGG
Sbjct: 5   GIYIHIPFCKRKCYYCDFNSYANMEK-SLEPFKDAIMREIR-NRKDELKDIFTSIYIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++ P  I  ILD I K + +S++ EI+IE NP  ++    + Y++ G+NRIS+G+Q+
Sbjct: 63  TPNVLPPFYIENILDEIYKYYDISNDAEISIELNPGLIDDEKLKTYKRIGINRISIGLQA 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +++ L+ +GR H   + I    +A   F  ++ D++YALP Q    ++  L   +S   
Sbjct: 123 WQDKLLKKIGRIHTIHDFIENYDMATKYFDNINIDIMYALPDQIFDDFKETLSNVVSLKP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +E+GT+FYK++++  +    +   + +Y+        +G   YEISN++  
Sbjct: 183 THISCYGLILEEGTVFYKLYEENKIKPADDEFEMMMYHYGIEFLQKNGYKHYEISNYAIP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HN  YW+   YIG GPGA+S V    +R   ++ K  + +++M+ + G+A+ + +
Sbjct: 243 GYECRHNTLYWKDLQYIGFGPGAYSFV---DNRRCGNV-KDIKKYIEMINRTGYAIEDID 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            L  + +  E++ +GLR+ +G+  +D++   G+++
Sbjct: 299 VLDEKDKMSEYMFLGLRMMDGVYDRDFKTRFGKSM 333


>gi|306822818|ref|ZP_07456194.1| coproporphyrinogen dehydrogenase [Bifidobacterium dentium ATCC
           27679]
 gi|309801312|ref|ZP_07695441.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium dentium JCVIHMP022]
 gi|304553450|gb|EFM41361.1| coproporphyrinogen dehydrogenase [Bifidobacterium dentium ATCC
           27679]
 gi|308222201|gb|EFO78484.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium dentium JCVIHMP022]
          Length = 402

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 191/399 (47%), Gaps = 31/399 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VY+H PFC+++C YCDFN++          + N+    + EM  +R       I      
Sbjct: 4   VYIHVPFCMRRCGYCDFNTYTAIDMGAGASRGNYANMVIREMAIVRDWQERHGIVEPPAD 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++++  ++  +LD + + W ++ N EIT EANP +V  +  +     G NR
Sbjct: 64  TVFFGGGTPTILKAADLVAMLDAVRETWGIADNAEITTEANPDTVNADYVRELADGGFNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H      A I  A     R S DLIY  P +++  W   + 
Sbjct: 124 ISFGMQSAVPHVLKTLDRTHTPENVEAGISAANAAGMRSSVDLIYGAPGESLDDWRTSVN 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V+H+S Y LT+   T   +    G L  P ++     Y +  ++ SA GL  YE
Sbjct: 184 TALDLEVNHISAYALTVAPNTTMGRRIAAGMLPTPDDDDEAAKYEIADALLSAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS--------------RVKVGSHRVAISIE 298
           ISN +  G ES HNL YWR  D+ G+GPGAHS              R +      A ++ 
Sbjct: 244 ISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYDAAALSERGTARRGQADGEDSATALR 303

Query: 299 K----HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                HP  W   + + G      E ++ E+  +E +M+GLR+REG+ +       G  +
Sbjct: 304 SWDIAHPRLWGSAISEGGIPWAGSENITVEENLEETIMLGLRIREGLDIA----RLGNAI 359

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                R L+  G I  ++      T RG  + D++IA L
Sbjct: 360 AETTWRELEHDGLIT-IEHHHAIPTLRGRLLNDTIIAKL 397


>gi|319943446|ref|ZP_08017728.1| coproporphyrinogen dehydrogenase [Lautropia mirabilis ATCC 51599]
 gi|319743261|gb|EFV95666.1| coproporphyrinogen dehydrogenase [Lautropia mirabilis ATCC 51599]
          Length = 423

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 197/374 (52%), Gaps = 23/374 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L VYVH P+C++KCPYCDFNSH +    V +  ++ +   ++     L   R + ++F 
Sbjct: 23  PLSVYVHIPWCLRKCPYCDFNSHNLPADGVDENAYLTALEADLDASLPLVWGRRVVTVFI 82

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL     I  +L  +     + ++ E+T+EANP + E   F  YR AGVNR+SLG
Sbjct: 83  GGGTPSLFSGAAIDRLLSSLRARLPLIADAEVTMEANPGTFERARFADYRAAGVNRLSLG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  +  L+ LGR H+ ++A AA   A  +F   + DL+YALP+QT+ +   +L +AL+
Sbjct: 143 IQSFSDAKLKALGRVHDRAQACAAAEAAAELFETFNLDLMYALPEQTLPELRADLTQALA 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  HLS Y LT+E  TLF +        +P E+ A  + +L   +        YE+S  
Sbjct: 203 FSPPHLSCYHLTLEPNTLFARFPPP----VPDEDQAAAMQDLLGEML-GDSYRNYEVSAW 257

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ++ HNLNYW +GDY+GIG GAH ++      V  +  KHP  +++     G+A  
Sbjct: 258 ARPGHQAQHNLNYWMFGDYLGIGAGAHGKLSFPDRIVRQAKYKHPRRYMETALA-GNACE 316

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
             E +       EF++  LRL EG+    ++               +R G +  V   +L
Sbjct: 317 IDEVVQPTDLPFEFMLNALRLTEGVDTALFQ---------------ERTGLLPAVIRVKL 361

Query: 377 R-CTQRGMTMLDSV 389
           R   +RG+ + D  
Sbjct: 362 RQAVERGLMVDDPA 375


>gi|321312034|ref|YP_004204321.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
 gi|320018308|gb|ADV93294.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
          Length = 379

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 196/376 (52%), Gaps = 11/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEMVMSQMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S 
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-SA 357

Query: 376 LRCTQRGMTMLDSVIA 391
           +  T +G  + + V  
Sbjct: 358 VYLTHQGKLLGNEVFG 373


>gi|254479248|ref|ZP_05092592.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034817|gb|EEB75547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydibrachium pacificum DSM 12653]
          Length = 375

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 209/379 (55%), Gaps = 11/379 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y+H PFC KKC YCDFNS+V  Y+   E ++++ + E+++  +      I S++ G
Sbjct: 3   EIGIYIHIPFCKKKCYYCDFNSYVG-YEHLMEEYVKALIEEIKYYSE--EDLKIVSVYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P  I ++L  I +++ V  + EITIE NP  +  +  + Y+  G+NRIS+G+
Sbjct: 60  GGTPNFLPPSYIEMVLSEIHRHYNVLGDAEITIEVNPGLLTEDKLKIYKVNGINRISIGL 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ + + L ++GR H   + +    L R  F  ++ DLIYALP QT  +W+  L + +  
Sbjct: 120 QAFQNRLLEYIGRIHTVEDFLENYALIRKYFDNVNVDLIYALPTQTFEEWQETLIKVVEL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +E+ T F +++++G L +  E   + +Y+       + G   YEISN +
Sbjct: 180 KPEHISTYSLILEENTPFGRLYREGKLPVIDEEEELKMYHWGIEFLKSKGYCHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HN+ YW   +Y+G G GAHS  K    R   + E+  E ++  +   G A  +
Sbjct: 240 LPGYQCKHNILYWELKEYLGFGAGAHSYFK---GRRWNNFER-VEEYIGAILGKGDAREK 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFS 374
              LS E +  EF+ +GLR+R+G+  +++    G ++    E      ++ G IE+ +  
Sbjct: 296 VIELSPEDEISEFMFLGLRMRKGVCEEEFRKRFGISMFERYEEIFIKYEKMGLIEKDK-D 354

Query: 375 RLRCTQRGMTMLDSVIANL 393
            +R T++G+ + + +  + 
Sbjct: 355 CVRLTEKGIDVSNVIFEDF 373


>gi|322383628|ref|ZP_08057379.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321151840|gb|EFX44783.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 383

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 203/378 (53%), Gaps = 15/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            VY+H PFC  KC YCDFNS V +   GQ   +++ +   EM+       P +I ++F G
Sbjct: 10  AVYIHIPFCTNKCYYCDFNSFVLK---GQPVHDYLDAMEREMERTVLEYPPGTIETVFVG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  +   L+ +   + +    E ++EANP + ++   Q     GVNR+S GV
Sbjct: 67  GGTPTVLLPDQMERFLEMVHTYFPIDEQTEFSMEANPGTTDLEKLQVMHSGGVNRLSFGV 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  +GR HN  +   +I  A    F  +S DL++ LP QT+   E  L++AL 
Sbjct: 127 QSFNNGLLTKIGRIHNTDDVYRSIENAHKAGFANISIDLMFGLPDQTVEMMEDTLKKALE 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S+Y L +E+ TLF+ ++    L LPSEN  + ++ L     +  G   YEISN 
Sbjct: 187 LHLHHYSIYSLKVEENTLFHTLYHKDQLPLPSENEELAMFQLIMDKLTEEGFIHYEISNF 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YW    Y GIG GAH  V    H   I+I K  + ++   R +G  ++
Sbjct: 247 AKSGYESRHNKMYWHNQSYYGIGAGAHGYVNRMRH---INI-KGVQPYIDATR-SGRPIL 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E +  ++  ++F+M+GLRL EG+S  D+    G +L+    +  R L+++G +E+ + 
Sbjct: 302 SQEIVPEQEAMEDFMMVGLRLLEGVSRDDFYNQFGTDLEGRFGQTIRQLEQKGLLEQSE- 360

Query: 374 SRLRCTQRGMTMLDSVIA 391
              R +++G+ + + V A
Sbjct: 361 KGYRLSKQGLFLGNEVFA 378


>gi|303326275|ref|ZP_07356718.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio sp. 3_1_syn3]
 gi|302864191|gb|EFL87122.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio sp. 3_1_syn3]
          Length = 447

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 212/385 (55%), Gaps = 19/385 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEM-QWMRQLTGPRSISS 73
           VY+H PFC  +C YC F+S      V         +++ + L E+  W  +L G   + +
Sbjct: 29  VYIHVPFCRTRCRYCAFHSIPLGRGVEPAASPLLRDYLDTLLLELAHWGDRLGG-TEVQT 87

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNR 132
           +FFGGGTPSL+ P+ + ++L+ +A+ +T+S   EIT+EANP S+    +   Y  AGVNR
Sbjct: 88  VFFGGGTPSLLPPRIVGIVLERLARCFTLSPKAEITLEANPESLRGSQSVPQYLAAGVNR 147

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QSL+E  LR LGR H A +++ A+  AR      ++ DL++ LP Q++ QW   L
Sbjct: 148 LSIGIQSLDESMLRLLGRPHRAQDSLHAVFAAREAGCANINMDLMWGLPGQSVRQWLQTL 207

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+  + DH+S Y LT+E GT      ++G L LP E     ++    +   A G   Y
Sbjct: 208 KDAVRMSPDHISAYGLTLEPGTALELDCEEGRLALPPERDQNIMFMEGAAFLEASGYLHY 267

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN + +G +  HNL YW   DY+G+GP A S +  G      + ++   +W    R+ 
Sbjct: 268 EISNFARMGFQCRHNLGYWEGADYLGLGPSATSTI-AGRRWTNPAGQR---AWDARARE- 322

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
           G    E E L+   +  E +M+ LR   G+ +K +  + GR+   + +R +Q     G I
Sbjct: 323 GSLGAEVENLTPTVRVLELIMLRLRTSRGMRLKAYREMTGRDFLRDHQRLIQALHENGLI 382

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
            R++   LR T+ GM + +S+++NL
Sbjct: 383 -RIRNGYLRLTRSGMLVSNSILSNL 406


>gi|221310474|ref|ZP_03592321.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221314798|ref|ZP_03596603.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221319720|ref|ZP_03601014.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. JH642]
          Length = 377

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 196/376 (52%), Gaps = 11/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S 
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-SA 357

Query: 376 LRCTQRGMTMLDSVIA 391
           +  T +G  + + V  
Sbjct: 358 VYLTHQGKLLGNEVFG 373


>gi|255767587|ref|NP_390428.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|251757469|sp|P54304|HEMN_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 1;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|225185215|emb|CAB14492.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 379

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 196/376 (52%), Gaps = 11/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S 
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-SA 357

Query: 376 LRCTQRGMTMLDSVIA 391
           +  T +G  + + V  
Sbjct: 358 VYLTHQGKLLGNEVFG 373


>gi|118444758|ref|YP_878569.1| coproporphyrinogen III oxidase [Clostridium novyi NT]
 gi|118135214|gb|ABK62258.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Clostridium novyi NT]
          Length = 375

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 182/331 (54%), Gaps = 11/331 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N   +Y+H PFC +KC YCDF S+      G+E+ +  +   +         + IS+IF 
Sbjct: 3   NDTSLYIHIPFCKQKCLYCDFTSYC-----GREDTMVEYSKALSKEIDNVKNKKISTIFI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +  Q   ++   I K  + +SN+E T+E+NP + +    +  +  GVNR+S+G
Sbjct: 58  GGGTPTYLCLQGWNILKQSIDK-LSKTSNLEFTVESNPKTFDEEKLKFLKSIGVNRLSIG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +++ L+ LGR H   E + + H+ARN+ F  ++ DL++ +P QT+  W+  L    
Sbjct: 117 LQSWQDKHLKSLGRIHTKDEFLKSYHMARNMGFKNINVDLMFGIPNQTLDDWKETLDEVT 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +HLS Y L IE+GT FY  ++   + LPSE +  ++Y  T       G H YEISN
Sbjct: 177 KLNPEHLSCYSLIIEEGTPFYDFYEKNKIELPSEELEREMYYYTLKFLEGKGYHQYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +    E  HNL YW   +YIG G  AHS V    +R    IEK    +++ +++N   +
Sbjct: 237 FAKKNYECRHNLVYWDLNEYIGCGAAAHSYVDGYRYRNENDIEK----YIECMKENKSPI 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            EK   S +   +EF+ MGLR  +GIS K++
Sbjct: 293 TEKLKSSFKSDIEEFMFMGLRKIKGISKKEF 323


>gi|299771722|ref|YP_003733748.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter sp.
           DR1]
 gi|298701810|gb|ADI92375.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter sp.
           DR1]
          Length = 364

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/370 (36%), Positives = 204/370 (55%), Gaps = 18/370 (4%)

Query: 29  VKKCPYCDFNSH-VRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           ++KCPYCDFNSH V    +  E    ++++ + + +   ++   R I S+F GGGTPSLI
Sbjct: 1   MRKCPYCDFNSHAVPDGALSSELEQTYLKALVADFETQLEMAQGRPIHSVFIGGGTPSLI 60

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             Q    +   +          EIT+EANP +VE + F GY +AG+NR+S+GVQS +   
Sbjct: 61  SAQGYVWLFAELKSLLKFEDGCEITLEANPGTVEHDPFAGYLEAGINRLSIGVQSFDTDH 120

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ LGR H+A+ AI AI  A+   F R++ DL++ LP+QT+ Q   +L+ A+     H+S
Sbjct: 121 LQKLGRIHSANNAIEAIQQAKQAGFKRVNVDLMHGLPEQTLEQALYDLKLAVESGATHIS 180

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            YQLTIE  T+F++       VLP + +  D+    ++   A+G   YE+S        S
Sbjct: 181 WYQLTIEPNTVFFRTQP----VLPQDEMLEDIQEQGEAYLKANGFINYEVSAWR-KELPS 235

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
            HNLNYW +GDY+ IG GAH +V            + P+ +L  V    H  ++K  + +
Sbjct: 236 AHNLNYWEFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAE-HLQMKK--IEA 292

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ-RQGFIERVQFSRLRCTQ 380
           E+   EF+M  LRL +GI    +E   G +LD   E   +L+ R+  +E    SRL CT+
Sbjct: 293 EELPFEFMMNALRLNDGIKADLYEQRTGLSLDHLNEVLTSLRARKLLVEDS--SRLACTE 350

Query: 381 RGMTMLDSVI 390
           +G   L+SV+
Sbjct: 351 QGHIFLNSVL 360


>gi|253579916|ref|ZP_04857184.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848915|gb|EES76877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 380

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            + + +Y+H PFC+KKC YCDF S     K  Q +++ + L E+    +  G RS+SS+F
Sbjct: 8   DSPMEIYIHIPFCIKKCDYCDFLSGPSGPKE-QADYVDALLEEINAAEEGKG-RSVSSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS+++ + I  IL+ I + + ++ + EITIE NP + + N  Q YR  G+NR+S+
Sbjct: 66  IGGGTPSVLDERFIGEILNHIRRKFQIADHAEITIEVNPGTADRNKLQAYRTYGINRLSI 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +++ L+ LGR HN  + +     AR   F  ++ DL+ A+P QT   W   L+  
Sbjct: 126 GLQSPDDRELKILGRIHNYEQFLETYRSAREAGFDNINIDLMSAIPDQTYEGWIHNLRTV 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                +H+S Y L IE+GT F        L LP E+   ++Y  T  I   +G   YEIS
Sbjct: 186 AGLDPEHISAYSLIIEEGTPFASR----TLNLPDEDAEYNMYEATAQILREYGFEQYEIS 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G E  HN+ YW   DY+G G GA S    G  R A +  +  + +L+  R     
Sbjct: 242 NYAKKGRECRHNVGYWIRQDYLGFGLGASS--LYGKERFANT--QDMKKYLENSRTPEKI 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
             ++  L+ E +  EF+ +GLR+  GIS  ++E   G  +D    +  R  +  G +   
Sbjct: 298 REKEPPLTREDEMAEFMFLGLRMTRGISKAEFERQFGSEIDAIYGDVLRKYKSMGLLLE- 356

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
           +  R+  ++ G+ + +SV+A+ 
Sbjct: 357 ENGRIFLSREGIHVSNSVMADF 378


>gi|289178665|gb|ADC85911.1| Oxygen-independent coproporphyrinogen-III oxidase [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 478

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/411 (32%), Positives = 198/411 (48%), Gaps = 40/411 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGPRSI----- 71
           VYVH PFC+++C YCDFN++     +G+     N+    + EM+ + +      +     
Sbjct: 63  VYVHVPFCIRRCGYCDFNTYTA-LDLGEGASRANYATLAIREMRVVHEWQLAHGVVEPPA 121

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+L+   ++  +LD + + W +  + EIT EANP SV+    +  R  G  
Sbjct: 122 STVFFGGGTPTLLPAGDLVAMLDAVREIWGIREDAEITTEANPDSVDPGYLRLLRDGGFT 181

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     LR L R HN S   A +  A  +    S DLIY  P +++  W   +
Sbjct: 182 RISFGMQSSVPHVLRTLDRTHNPSNVAADVEAAHRLGLETSVDLIYGAPGESIEDWCDSV 241

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V H+S Y LT+E  T   +    G++  P ++     Y L   + SA GL  Y
Sbjct: 242 RSAIDLGVHHISAYALTVEPHTKMGRRIAAGEIEAPDDDDEATKYELADQLLSAAGLEWY 301

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS------RVKVG-SHRVAISIE------ 298
           EISN +  G ES HNL YWR  D+ GIGPGAHS      R+ +G  H     I       
Sbjct: 302 EISNWARPGHESRHNLGYWRNVDWAGIGPGAHSHYNAVRRMDMGIGHDPKAGIPVGANGQ 361

Query: 299 ----------------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                            HP  W   ++ N     + E +  ++ A+E LM+G+RLREG++
Sbjct: 362 GYPARDTWTSMRAWDIPHPRVWAVALQHNRVPWQDFELIDCDENAEELLMLGVRLREGLN 421

Query: 343 VKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           V  +    G  +       L  +G + R   + L  T RG  + D VI  L
Sbjct: 422 VSAFAERTGMKIPSTAIDTLVNEGLLTRSDDA-LIATLRGRLLNDLVIERL 471


>gi|297626073|ref|YP_003687836.1| Coproporphyrinogen oxidase / Oxygen-independent coproporphyrinogen
           III oxidase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921838|emb|CBL56398.1| Coproporphyrinogen oxidase / Oxygen-independent coproporphyrinogen
           III oxidase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 399

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 196/382 (51%), Gaps = 14/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSIS 72
           +  L VYVH PFC  +C YCDFN++      G   ++++ +   E+    +  G  R++S
Sbjct: 26  TRPLSVYVHIPFCAVRCGYCDFNTYTPSQLAGMNMDDYLAAVHAEIAAAARALGTGRAVS 85

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++  P  +  +L  +   + +    E+T EANP +++    +    +G NR
Sbjct: 86  TVFFGGGTPTMATPAQLGEVLADLRDTFGLVPGAEVTTEANPETLDRARLETLLGSGFNR 145

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS +EQ L  L R+H    A+     A  + FP +S DLIY  P +++  W   L
Sbjct: 146 LSLGMQSADEQVLARLDRHHTPGRALQVARWAHEVGFPDVSLDLIYGTPGESLDSWRATL 205

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL  A +HLS Y L +E+GT   +  + G+L +P E+   D Y L + + S  GL  Y
Sbjct: 206 DAALGVAPEHLSAYSLIVEEGTALARRIRHGELAMPDEDAEADEYLLAERMLSTAGLANY 265

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G E+ HNL YWR  D+ G GPGAHS V    H V     +HP  +  ++ + 
Sbjct: 266 EISNWALPGHEARHNLAYWRSDDWWGFGPGAHSHV----HGVRWWNVRHPRRYAALLGEG 321

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
                + E + +  + +E +++ LR+ +G+ V +        L     R L        V
Sbjct: 322 ARPREDFEVIDAPTRHEERVLLELRIADGLPVGELTGTERARLAEPLSRGLV------TV 375

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              R+  T +G  + D+V  +L
Sbjct: 376 VGDRVHLTLQGRLLADAVTRDL 397


>gi|256831111|ref|YP_003159839.1| oxygen-independent coproporphyrinogen III oxidase [Desulfomicrobium
           baculatum DSM 4028]
 gi|256580287|gb|ACU91423.1| oxygen-independent coproporphyrinogen III oxidase [Desulfomicrobium
           baculatum DSM 4028]
          Length = 384

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 204/377 (54%), Gaps = 17/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFCV+KC YC F+S     +     ++Q  L E+    ++ G   + S++FGGGT
Sbjct: 3   LYVHVPFCVRKCGYCAFHSGPFSREAAA-LYMQHVLRELADWGKVLGRVPVESVYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGVNRISLGVQS 139
           PSL+EP  I  +L+     +T+S++ EIT+EANP SV    F    R  GVNR+SLGVQS
Sbjct: 62  PSLLEPGQIGALLEAAGTCFTLSADAEITLEANPDSVLRPGFLDSVRGLGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  L  LGR H++ +A  A+  AR   F  +S DLI+ LP QT  +W  +L  A+  +
Sbjct: 122 LQDDLLAMLGRPHDSRQARLAVQAARAAGFSNLSLDLIWGLPGQTHERWMNDLAAAVELS 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L++E GT   +  ++G L LP E     +Y        + G   YEISN++ 
Sbjct: 182 PEHLSCYGLSLEDGTALTRKVEEGALTLPDEETGALMYMDGSEFLESSGYAHYEISNYAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y+G+GP A S ++        ++ ++       V   G    E 
Sbjct: 242 PGRESRHNRGYWAGLEYLGLGPAAVSTIQDRRWSNPTALGEY-----AAVVAEGKERNET 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-----RNLDIECERNLQRQGFIERVQF 373
           E L++  +  E +M+ LR   G+ ++ ++   G     R+  +E    L+  G + R++ 
Sbjct: 297 EVLTARTRLQEMVMLTLRTGAGLDLEKFKATTGTEFPWRHPAVE---QLRSSGLV-RLRA 352

Query: 374 SRLRCTQRGMTMLDSVI 390
             L+ T++GM + +SVI
Sbjct: 353 GHLQLTRKGMLVSNSVI 369


>gi|183601578|ref|ZP_02962948.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|241190923|ref|YP_002968317.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196329|ref|YP_002969884.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183219184|gb|EDT89825.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|240249315|gb|ACS46255.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250883|gb|ACS47822.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793912|gb|ADG33447.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 437

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 196/410 (47%), Gaps = 38/410 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VYVH PFC+++C YCDFN++          + N+    + EM+ + +      +     S
Sbjct: 22  VYVHVPFCIRRCGYCDFNTYTALDLGEGASRANYATLAIREMRVVHEWQLAHGVVEPPAS 81

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+L+   ++  +LD + + W +  + EIT EANP SV+    +  R  G  R
Sbjct: 82  TVFFGGGTPTLLPAGDLVAMLDAVREIWGIREDAEITTEANPDSVDPGYLRLLRDGGFTR 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     LR L R HN S   A +  A  +    S DLIY  P +++  W   ++
Sbjct: 142 ISFGMQSSVPHVLRTLDRTHNPSNVAADVEAAHRLGLETSVDLIYGAPGESIEDWCDSVR 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V H+S Y LT+E  T   +    G++  P ++     Y L   + SA GL  YE
Sbjct: 202 SAIDLGVHHISAYALTVEPHTKMGRRIAAGEIEAPDDDDEATKYELADQLLSAAGLEWYE 261

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS------RVKVG-SHRVAISIE------- 298
           ISN +  G ES HNL YWR  D+ GIGPGAHS      R+ +G  H     I        
Sbjct: 262 ISNWARPGHESRHNLGYWRNVDWAGIGPGAHSHYNAVRRMDMGIGHDPKAGIPVGANGQG 321

Query: 299 ---------------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                           HP  W   ++ N     + E +  ++ A+E LM+G+RLREG++V
Sbjct: 322 YPARDTWTSMRAWDIPHPRVWAVALQHNRVPWQDFELIDCDENAEELLMLGVRLREGLNV 381

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +    G  +       L  +G + R   + L  T RG  + D VI  L
Sbjct: 382 SAFAERTGMKIPSTAIDTLVNEGLLTRSDDA-LIATLRGRLLNDLVIERL 430


>gi|258648598|ref|ZP_05736067.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella tannerae ATCC 51259]
 gi|260851383|gb|EEX71252.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella tannerae ATCC 51259]
          Length = 368

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 21/379 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  +C YCDF S  +  +  +E + ++ + E++  R      +  +I+FGGG
Sbjct: 3   GLYVHVPFCASRCIYCDFYSTTQTTE-QRERYTKALIDEIK-ARAGRWDDTFQTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    ++ I+  I     +S + EIT EANP  +  N  +  +  G+NRISLGVQ+
Sbjct: 61  TPSQLSIAEVSHIITAIQSLLHISPSAEITFEANPDDINENYVKQLKSLGINRISLGVQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L FL R H A EA  A+     I   +S DLIY LP QT++ W  +++RAL   +
Sbjct: 121 FDDARLHFLRRRHTAKEAAKAVETISTIIENVSLDLIYGLPNQTLSDWATDIRRALQLPI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLS Y LTIE+GT  +++ +   +    E++   +Y +    T   G+  YEISN ++ 
Sbjct: 181 KHLSSYALTIEEGTPLFQLQQKQIIKEVKEDITRAMYEMLMLQTEQAGMQHYEISNFAYP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-----MVRKNGHA 314
              S HN NYW    Y+G+GPGAH            S + H   W K      ++  G  
Sbjct: 241 TYHSQHNHNYWLGLPYLGVGPGAH------------SYKGHTRRWNKGDLNYYLQHPGQP 288

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           + + E L+ ++  +E L++ LR +EG+S+ + +    RN  +       +QG++  ++  
Sbjct: 289 LFDFEQLNEDEHFNEMLLLRLRTKEGLSLNELKP-QDRNYLLSVASPFIKQGYLHFLR-E 346

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L  ++ G+ + D +I++L
Sbjct: 347 NLHVSKHGIFISDYIISSL 365


>gi|221323998|ref|ZP_03605292.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. SMY]
          Length = 366

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 181/337 (53%), Gaps = 7/337 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +++E+Q +E + +GLR   G+S K +    GR+LD
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLD 335


>gi|219683887|ref|YP_002470270.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|219621537|gb|ACL29694.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium animalis subsp. lactis AD011]
          Length = 420

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 196/410 (47%), Gaps = 38/410 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VYVH PFC+++C YCDFN++          + N+    + EM+ + +      +     S
Sbjct: 5   VYVHVPFCIRRCGYCDFNTYTALDLGEGASRANYATLAIREMRVVHEWQLAHGVVEPPAS 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+L+   ++  +LD + + W +  + EIT EANP SV+    +  R  G  R
Sbjct: 65  TVFFGGGTPTLLPAGDLVAMLDAVREIWGIREDAEITTEANPDSVDPGYLRLLRDGGFTR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     LR L R HN S   A +  A  +    S DLIY  P +++  W   ++
Sbjct: 125 ISFGMQSSVPHVLRTLDRTHNPSNVAADVEAAHRLGLETSVDLIYGAPGESIEDWCDSVR 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V H+S Y LT+E  T   +    G++  P ++     Y L   + SA GL  YE
Sbjct: 185 SAIDLGVHHISAYALTVEPHTKMGRRIAAGEIEAPDDDDEATKYELADQLLSAAGLEWYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS------RVKVG-SHRVAISIE------- 298
           ISN +  G ES HNL YWR  D+ GIGPGAHS      R+ +G  H     I        
Sbjct: 245 ISNWARPGHESRHNLGYWRNVDWAGIGPGAHSHYNAVRRMDMGIGHDPKAGIPVGANGQG 304

Query: 299 ---------------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                           HP  W   ++ N     + E +  ++ A+E LM+G+RLREG++V
Sbjct: 305 YPARDTWTSMRAWDIPHPRVWAVALQHNRVPWQDFELIDCDENAEELLMLGVRLREGLNV 364

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +    G  +       L  +G + R   + L  T RG  + D VI  L
Sbjct: 365 SAFAERTGMKIPSTAIDTLVNEGLLTRSDDA-LIATLRGRLLNDLVIERL 413


>gi|71065781|ref|YP_264508.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter arcticus
           273-4]
 gi|71038766|gb|AAZ19074.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter arcticus
           273-4]
          Length = 441

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/276 (41%), Positives = 165/276 (59%), Gaps = 11/276 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CVKKCPYCDFNSH      GQ    + ++ + L +    + LT  R I SI
Sbjct: 31  LALYIHIPWCVKKCPYCDFNSHELPVD-GQLSMYDEYVDALLQDAAMQQILTQGREIGSI 89

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+       + DG+ K +  +S++EIT+EANP ++E   F  Y + G+NR+S
Sbjct: 90  FIGGGTPSLLPIAQYQRLFDGLQKYYEFASDIEITMEANPGTLEHAPFVEYLEVGINRLS 149

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L  LGR HN  +A++AI  AR   F R++ DL++ LP+QT ++   ++Q 
Sbjct: 150 IGVQSFSAEQLTTLGRIHNPIQALSAIKAARAAGFERVNVDLMHGLPEQTRSEALDDIQM 209

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A +    H+S YQLTIE  T+FY+       VLP E+   D+    Q +    G H YE+
Sbjct: 210 AHNAGATHISWYQLTIEPNTVFYRSQP----VLPDEDRLADIEEAGQILLQNLGYHNYEV 265

Query: 254 SNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKV 288
           S  S    +   HN+NYW++GDY+ IG GAH +V V
Sbjct: 266 SAWSGAADKPCRHNVNYWQFGDYLAIGAGAHGKVTV 301


>gi|158313942|ref|YP_001506450.1| coproporphyrinogen III oxidase [Frankia sp. EAN1pec]
 gi|158109347|gb|ABW11544.1| putative oxygen-independent coproporphyrinogen III oxidase [Frankia
           sp. EAN1pec]
          Length = 409

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 204/397 (51%), Gaps = 20/397 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWM 62
           +  +T  G+   GVYVH P+C  +C YCDFN++         + G  +F+ S  TE +  
Sbjct: 19  DAALTEVGTRPFGVYVHVPYCAARCGYCDFNTYTPAELGAGGQGGAASFVDSVATEARLA 78

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R + G R  ++S++F GGGTP+L+   ++A +L  +   + ++ + E+T EANP SV+  
Sbjct: 79  RSVLGERDLTVSTVFVGGGTPTLLPAADLAKVLRVLDDTFGLAGDAEVTTEANPESVDRE 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R +G  RIS G+QS     L  L R H        +  AR+  F ++S DLIY  
Sbjct: 139 TLEQLRASGYTRISFGMQSARPHVLAALDRRHTPGRVPEVVGWARSAGFRQLSLDLIYGA 198

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++ + W   L   +  A DH+S Y LT+E+GT   +  + G+L+ P +++  D Y   
Sbjct: 199 PGESESDWAASLDTVIELAPDHVSAYALTVEEGTKLSRRVRRGELLEPDDDLLADRYLQA 258

Query: 240 QSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A GL  YE+SN +   +    HN+ YWR  D+ G+GPGAHS V      V     
Sbjct: 259 DEALAAAGLTNYEVSNWARDQSSWCRHNMGYWRGDDWWGLGPGAHSHVG----GVRWWNV 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +HP  +   V         +E L ++ +  E +M+G+RL EG+ V   + L  + LD+  
Sbjct: 315 RHPTEYATRVGAGHSPAAGREVLDAQARRVERVMLGVRLVEGLGV---DALGEQALDVAA 371

Query: 359 ERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANL 393
           E  L   G I  + +   R+  T+RG  + D+V+  L
Sbjct: 372 E--LAADGLIVADVLAQGRVALTRRGRLLTDTVVRAL 406


>gi|218288639|ref|ZP_03492916.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241296|gb|EED08471.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 388

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 192/354 (54%), Gaps = 11/354 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C YCDF + V+      E ++ + + E   M  L  P  +++ +FGGGT
Sbjct: 13  LYVHIPFCKSRCFYCDFTTFVKS-PAAMEAYVDALVAEWDLMEPLEAP--LATAYFGGGT 69

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+L+    +  +LD + + +  S++ EIT E+NP S+     +  R  GVNRIS G Q+ 
Sbjct: 70  PTLLSASLLDRLLDAMRQRFDFSADAEITFESNPDSITREKLRVLRDHGVNRISFGAQAF 129

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  L+ +GR H       A+  AR++ FP ++ DL++ LP QT+      ++  L   V
Sbjct: 130 QDHLLQAIGRAHLRDAIEEAVWAARDLGFPHVNIDLMFGLPDQTLHDVAESVEAVLRLPV 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L IE GT F K H+ G L LP E+   D+Y L + +    G   YEISN +  
Sbjct: 190 DHVSAYWLKIEPGTPFAKWHEMGLLSLPGEDAEADMYRLVRDVLRDAGFVHYEISNFARP 249

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E+ HNL YWR   Y   G GAH   +   +    ++E+   ++L  VR+    V  ++
Sbjct: 250 GGEARHNLVYWRNEPYCASGVGAHGYARGERY----AMERRFSAYLAAVREGRRPVSARQ 305

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
            +   ++A++ +++GLRL EG+  + +E   GR ++      ++R   +G +ER
Sbjct: 306 RVPVAERAEDQVILGLRLAEGVDRQRFERRFGRTIEDVFPGVVERLLAEGLLER 359


>gi|259046703|ref|ZP_05737104.1| coproporphyrinogen dehydrogenase [Granulicatella adiacens ATCC
           49175]
 gi|259036599|gb|EEW37854.1| coproporphyrinogen dehydrogenase [Granulicatella adiacens ATCC
           49175]
          Length = 385

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 182/339 (53%), Gaps = 10/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             Y+H PFC   C YCDFN   + +  GQ  + +I+  + EM+   +      + +++ G
Sbjct: 5   AAYIHIPFCSHICYYCDFN---KVFIEGQPVDEYIELLIREMELTGKKYKIEPLETLYVG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS + PQ +  +LDGI +   +    E ++E NP           +K GVNR+S+GV
Sbjct: 62  GGTPSSLNPQQMERLLDGIHQYLPLQKGAEFSMELNPDDGTHELLTVMKKGGVNRLSMGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+     L+ +GR H    AI  I  AR + F  MS DLI+ LPKQT+  +E  L+ A+ 
Sbjct: 122 QTFNNDLLKAIGRKHTKETAIRTIENARQVGFENMSIDLIFRLPKQTIADFEESLKMAMD 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S+Y L +E+ T+FY + + G L LP+++   D++ L        G H YEISN+
Sbjct: 182 LDLPHYSIYSLILEQKTVFYNLMRQGKLPLPTQDEEADMFELAMKTMKDFGRHHYEISNY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL+YW+  +Y   G GAH  V    ++    I    + +L+ +R+    + 
Sbjct: 242 SIPGYESRHNLHYWKADEYFAFGAGAHGYVNGVRYQNNGPI----QHYLEPLREGKLPIF 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            +  LS +Q  +EF+ +GLR   G+S K++    G ++D
Sbjct: 298 SETQLSKKQLIEEFMFLGLRKFSGVSKKEFMERFGNSMD 336


>gi|56421042|ref|YP_148360.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
 gi|56380884|dbj|BAD76792.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
          Length = 379

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 207/381 (54%), Gaps = 16/381 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++  Y H PFC   C YCDFN   + +  GQ  ++++++   EM W     G + + ++F
Sbjct: 2   AVSAYFHIPFCAHICHYCDFN---KVFAAGQPIDDYLRAMDKEMAWTAAEFGSQ-LKTLF 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+++EP  +  +L  I +++   S   E T+EANP  +        R AGVNR+S
Sbjct: 58  IGGGTPTVLEPAQLGCLLASIHRHFQFDSQTAEFTVEANPDGLTKEKLAILRDAGVNRLS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ ++Q L+ +GR H   + I A+ LAR + F  +S D++Y LP QT+ Q+  +L+ 
Sbjct: 118 LGVQTFDDQLLQTIGRTHRRGDVIRAVALAREVGFQNISIDVMYGLPGQTLEQFTADLEA 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A S  V HLS Y L +E  T+FY   + G L LP E +  ++Y       +A G   YEI
Sbjct: 178 AFSLHVPHLSAYSLILEPRTIFYNEWRKGRLRLPGEEMEAEMYEAAMEQMAAAGYRQYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G ES HNL YW   +Y GIG GAHS +  G  R  I   +H   ++  + +   
Sbjct: 238 SNYALPGFESRHNLTYWNNEEYYGIGAGAHSYID-GVRRANIGPIRH---YISAIERGQW 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIER 370
              +   L++ +Q +E + +GLR  EG+S   +    GR+L       ++R+   G +E 
Sbjct: 294 PHRDVRRLTTREQMEEEMFLGLRKTEGVSKACFRQKFGRDLHDIFGAAIRREIENGRLEE 353

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
            + + +R T+RG  + + V A
Sbjct: 354 TE-THIRLTKRGKLLGNEVFA 373


>gi|331004572|ref|ZP_08328040.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           oral taxon 107 str. F0167]
 gi|330410621|gb|EGG90046.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           oral taxon 107 str. F0167]
          Length = 385

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 212/380 (55%), Gaps = 8/380 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC +KC YCDF S  +     ++ ++   + E++   Q      +SSIF GG
Sbjct: 6   LELYVHIPFCEEKCKYCDFLS-FKADDGEKKAYVTQLIEEIKAQGQNYSDYLVSSIFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I  I++ I +N+ V ++ E++IE NP ++  +     +KAGVNRIS G+Q
Sbjct: 65  GTPTTLNGIWILDIMNAIRENFMVETDAEVSIECNPGTLSTSKIMHIKKAGVNRISFGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E+ L+ LGR H   + + +  LAR   F  ++ DL+  LPKQT+  ++  L+R  + 
Sbjct: 125 SSIEEELKELGRIHTYKDFLQSYQLAREYGFTNINVDLMSGLPKQTIDSYKTTLKRVCAL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +H+S Y L IE GT F++ +  ++G  +LP EN   ++Y LT+SI   HG   YEISN
Sbjct: 185 KPEHISAYSLIIEPGTPFFEKYGSEEGAQLLPGENTDREMYALTKSILKEHGYERYEISN 244

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN+ YW    Y+G+G GA   V   + R  +  +      +KM +      
Sbjct: 245 YAKPGRECRHNIGYWTGVSYLGLGVGASGYVM--NRRFHVESDYRKYMSVKMQQDITPLY 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            + E L  +   +EF+ +GLRL +G+S  ++    G ++    +R ++R   ++ ++++ 
Sbjct: 303 CDIEELDIKANMEEFMFLGLRLTKGVSRHEFNEKFGVDMFEVFDRQIKRNMMLKLMEYNS 362

Query: 376 --LRCTQRGMTMLDSVIANL 393
             LR T++G+ + + V+++ 
Sbjct: 363 PYLRLTEKGLDLSNMVMSDF 382


>gi|317479696|ref|ZP_07938819.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
 gi|316904149|gb|EFV25980.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
          Length = 376

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 193/377 (51%), Gaps = 10/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     ++ +I++  TE++  +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTR--SELKQQYIRALCTELKTRKGYLKEEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I + +      EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAHEDFEQIFRTIKEVYGTEHAEEITLEANPDDLTEEYVSMLRTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  +L+ L R HNA++AIAAIH  R   F  +S DLIY LP +T  +WE +LQ+A+   
Sbjct: 121 FDAPTLKLLNRRHNAAQAIAAIHRLRQAGFRNISIDLIYGLPDETDQRWERDLQQAVGLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  ++  ++       A G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTRIYEMLQSHRISEVDEESSLRFFSALMDTLGAAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G GP AHS           S+    E ++K + + GH   E 
Sbjct: 241 PGMYSRHNTAYWKGIPYLGCGPSAHSFNAETREWNTASL----EGYIKSI-EEGHRSSET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRL 376
           E L    + +E++M  LR   GIS+   E   G  L   C +      Q     +Q  RL
Sbjct: 296 EILDKVTRYNEYIMTSLRTMWGISLTYTEEAFGTELCQYCTKMAAPYLQSHKLEMQADRL 355

Query: 377 RCTQRGMTMLDSVIANL 393
           R T+ G+ + D +I++L
Sbjct: 356 RLTREGIFVSDGIISDL 372


>gi|225567879|ref|ZP_03776904.1| hypothetical protein CLOHYLEM_03952 [Clostridium hylemonae DSM
           15053]
 gi|225163357|gb|EEG75976.1| hypothetical protein CLOHYLEM_03952 [Clostridium hylemonae DSM
           15053]
          Length = 367

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 204/381 (53%), Gaps = 29/381 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC+KKC YCDF S     +  QE ++     +++   +L     + ++F GG
Sbjct: 4   LELYIHIPFCIKKCRYCDFQSAPSTKEERQE-YVTGLCRKIRSYGELAEAYHVVTVFIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E   I  I+D +   + + +  EIT+EANP +V    F+  R AG+NR+S+G+Q
Sbjct: 63  GTPSVLEGAQILDIMDAVRGTFPIDAGAEITMEANPGTVTKEKFKTLRHAGINRLSIGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H   + +     AR   F  ++ DL+ A+P Q++  W+  L R    
Sbjct: 123 STDNSELKMLGRIHTYEDFLQTFDAARETGFDNINVDLMSAIPFQSVDSWDTTLIRTAGL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV--LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +H+S Y L IE+GT F++ + +G     LPSE     +Y  T+ I S +G H YEISN
Sbjct: 183 GPEHISAYSLIIEEGTPFFERYGNGKRAGELPSEEEERLMYMHTRDILSEYGYHRYEISN 242

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   +Y+GIG GA S ++   +R                   G   
Sbjct: 243 YARPGYECRHNLGYWNRAEYLGIGTGAASLMQ--EYRFT----------------EGEEP 284

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQ 372
           V+   LS ++Q +EF+ +GLR  EGIS K ++   GR ++    +    + R+G +E ++
Sbjct: 285 VK---LSVQEQMEEFMFLGLRKTEGISKKAFQKCFGRAVESVYGKVIIEMCRKGLLE-ME 340

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              +R T++G  + + V++  
Sbjct: 341 GDAVRLTEKGTDVSNYVMSEF 361


>gi|268609183|ref|ZP_06142910.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus flavefaciens FD-1]
          Length = 364

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/384 (36%), Positives = 214/384 (55%), Gaps = 32/384 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++G+Y+H PFC KKC YCDF S V   K   E ++Q+ L  ++            +++FG
Sbjct: 3   NVGIYIHVPFCGKKCSYCDFYS-VCYTKQQTELYVQAVLRNIRHYGD--SELKADTVYFG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ I  IL  I  ++ V+ N EIT+EANP+++       YR AG+NR+S+GV
Sbjct: 60  GGTPSLLTPEQIGNILSCIRSSFNVADNAEITMEANPATLTPEKLAAYRSAGINRLSIGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS+ +  LRFLGR HNA  A  A++ A    F  +S DL+ ALP Q     +  +Q   S
Sbjct: 120 QSMNDDELRFLGRLHNAERAEKAVYDAAEAGFDNISCDLMIALPSQKTESMKHSIQMLTS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV---LPSENVAVDLY-NLTQSITSAHGLHAYE 252
             + H+S Y L +E+GT F     D D +   LP+++   +LY N+ + + S  G   YE
Sbjct: 180 LPIQHISAYILKVEEGTPF-----DCDDIIASLPNDDETAELYLNMCEELES-RGFMQYE 233

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN +  G ES HN  YW+  DYIGIGP AHS    G  R A+S  +  +S++       
Sbjct: 234 VSNFAKSGFESRHNCRYWKCQDYIGIGPSAHS--CFGGKRFAVS--RDIDSFI------- 282

Query: 313 HAVVEKEFLSSEQQA--DEFLMMGLRLREGISVKDWEMLAGRNLDIECE-RNLQRQGFIE 369
           ++ V+   ++ E     +E+ M+ LRL+EG+ +   E +     +IE +  +L + G+IE
Sbjct: 283 NSDVQPTEVTDESPCGFEEYSMLRLRLKEGLCL---ERVPEHRAEIEKKLPSLLKAGYIE 339

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
               + +  T++G  M +SVI  L
Sbjct: 340 -YDGNIVSLTRKGFLMSNSVIEYL 362


>gi|327534928|gb|AEA93762.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis OG1RF]
          Length = 394

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 18  AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ K  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 75  GTPTSLSAKQLDVLLKGVRKQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 135 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 194

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 195 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 255 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 310

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 311 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 370

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 371 --LRLTKKGLFVGNNVF 385


>gi|315613436|ref|ZP_07888344.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis ATCC
           49296]
 gi|315314432|gb|EFU62476.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis ATCC
           49296]
          Length = 376

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 212/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +        + +S+++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     +++ VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDTDKIAVLKRSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+S 
Sbjct: 123 DNKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMAQVKDNVAKAISL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLNAV-EAGNARIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG ++ +   
Sbjct: 296 EEHLSQREQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLMQ-IDGD 354

Query: 375 RLRCTQRGMTMLDSV 389
           R+R T+RG+ + D+V
Sbjct: 355 RVRMTKRGLFLGDTV 369


>gi|289422296|ref|ZP_06424147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus anaerobius 653-L]
 gi|289157301|gb|EFD05915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus anaerobius 653-L]
          Length = 378

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 205/382 (53%), Gaps = 16/382 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFG 77
            +Y+H PFC KKC YCDF S+V     G++  I S+L  ++    L       I SIF G
Sbjct: 6   AIYIHIPFCAKKCYYCDFTSYV-----GRDEEINSYLDSLEKEMDLYMDKKEDIYSIFIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P  +  +   I K   + S  E TIE+NP ++  +  +  +K GVNR+S+G+
Sbjct: 61  GGTPSLLSPDQLDRLFGIIEKKVNLESLCEYTIESNPGTLTRDKLRTMKKHGVNRLSMGL 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+++++ L+F+GR H+  + + +   AR      ++ DLI+A   QT+  W+  L++ ++
Sbjct: 121 QAVQDKHLKFMGRIHDMDQFVESFEFARQEGLENINVDLIFAFEGQTLEDWKESLEKVVA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+S Y L IE+GT FY+M++DG L    E+  + +Y  T       G H YEISN+
Sbjct: 181 MNPDHISAYSLIIEEGTTFYRMYQDGRLNDFDEDTYISMYRYTVEKLKDSGYHQYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HN+ YW   +Y G G GA     +G  R   +  K+ + +++ +      + 
Sbjct: 241 AKEGCECKHNILYWDCLNYYGFGLGASGF--IGDVRYTNT--KNMKDYMEDLDNKKKPIE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGI---SVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            KE ++S+ + +E +++GLR  EGI   +V  +      N  +   +N   +G +  V  
Sbjct: 297 FKEVIASKDRFNEKIILGLRKNEGILLDTVTKYLTDKEENDFMVKVKNYIDKGLL-LVDN 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RLR  Q G  + +S+  +L V
Sbjct: 356 GRLRLGQEGREVSNSIFVDLMV 377


>gi|227488402|ref|ZP_03918718.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227543014|ref|ZP_03973063.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227091616|gb|EEI26928.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181236|gb|EEI62208.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 380

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 203/390 (52%), Gaps = 31/390 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-------- 69
           + G+Y+H P+C  +C YCDFN++V    +G ++ + ++   ++   +L   +        
Sbjct: 2   AFGLYIHVPYCTVRCGYCDFNTYV----LGSDDALPAYHEALEKELELATAQLEATGGMP 57

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              +S+IF GGGTPS++  Q +A ILD ++    ++   E+T EANP S     F   R 
Sbjct: 58  ADGVSTIFVGGGTPSVLGGQGLARILDAVSHTMKIAPGAEVTTEANPESTSPEFFSTIRS 117

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS     LR L R H+   A+ A   A +  F  ++ DLIYA P +T   
Sbjct: 118 AGFTRVSLGMQSASPHVLRVLERQHSPQRALDAAREAIDAGFEHVNLDLIYATPGETDDD 177

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ ALS  +DHLS Y L +E+GT   +  + G+L +PSE +  D Y +   +    
Sbjct: 178 LRRSVKLALSTGIDHLSAYSLIVEEGTALNRKVQHGELPMPSEEIMADRYEIISHMAEEA 237

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YE+SN +  G E LHN+ YWR   + G GPGAHS   VG HR     EK P  + +
Sbjct: 238 GLSWYEVSNFAKPGGECLHNMGYWRSEPWWGAGPGAHS--FVGKHR--WMNEKLPARYAE 293

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI---SVKDWEMLAGRNLDIECERNLQ 363
            + +    V  +E L+ E +  E +M+ LRL EGI   +V D       N  ++ +R + 
Sbjct: 294 RLGRGELPVRSEETLTDEDRYVEEVMLRLRLSEGIRRAAVHD-------NGQVQIDRYIA 346

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G +E     ++R T+ G    D + A++
Sbjct: 347 -AGLLEE-SGGQVRVTREGRLHADGIAADI 374


>gi|1303805|dbj|BAA12461.1| YqeR [Bacillus subtilis]
          Length = 366

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 193/367 (52%), Gaps = 11/367 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  ++ANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVDANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S 
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-SA 357

Query: 376 LRCTQRG 382
           +  T +G
Sbjct: 358 VYLTHQG 364


>gi|111221442|ref|YP_712236.1| coproporphyrinogen III oxidase [Frankia alni ACN14a]
 gi|111148974|emb|CAJ60654.1| putative oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Frankia alni
           ACN14a]
          Length = 411

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 195/390 (50%), Gaps = 22/390 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRR-------YKVGQENFIQSFLTEMQWMRQLTGPR 69
            +LG YVH P+C  +C YCDFN++            VG   F+     E++  R + G  
Sbjct: 28  RALGAYVHVPYCAARCGYCDFNTYTAADLGGALVSSVGLTTFVDIATKEIRLARAVLGDA 87

Query: 70  S--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              IS++F GGGTP+L+   ++A +L  +   + ++++ E+T EANP SV+    +  R 
Sbjct: 88  DLPISTVFIGGGTPTLLSAGDLARLLHALDAEFGLAADAEVTTEANPESVDPAQLEQLRA 147

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  R+S G+QS     L  L R H        +  AR   F ++S DLIY  P ++   
Sbjct: 148 AGYTRVSFGMQSDRPHVLAALDRRHTPGRVSEVMRWARKAGFEQVSLDLIYGAPGESEAD 207

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L+ A+    DH+S Y LT+E+GT   +  + G+L+ P +++  D Y L   I +A 
Sbjct: 208 WAASLRAAVQLGPDHVSAYALTVEEGTKLSRRVRRGELLEPDDDLLADRYLLADEILTAA 267

Query: 247 GLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           GL  YE+SN S    A   HNL YWR   + G GPGAHS V      V     +HP  + 
Sbjct: 268 GLTNYEVSNWSRGPAARCRHNLGYWRGDHWWGFGPGAHSHVG----GVRWWNVRHPAEYA 323

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             +         +E L +  +  E +M+G+RL EG+ V + +        +    +L R 
Sbjct: 324 ARLGAQRSPASAREELDASTRRVERVMLGVRLAEGLGVAELD-----EAGLAACADLARS 378

Query: 366 GFIE--RVQFSRLRCTQRGMTMLDSVIANL 393
           G +E   ++  R+R T+RG  + D+V+  L
Sbjct: 379 GLVEPGALESGRVRLTRRGRLLTDTVVRAL 408


>gi|86739970|ref|YP_480370.1| coproporphyrinogen III oxidase [Frankia sp. CcI3]
 gi|86566832|gb|ABD10641.1| coproporphyrinogen III oxidase, anaerobic [Frankia sp. CcI3]
          Length = 411

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 195/388 (50%), Gaps = 22/388 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR-------YKVGQENFIQSFLTEMQWMRQLTGPRS- 70
            GVYVH P+C  +C YCDFN++            VG   F+     E++  R + G +  
Sbjct: 30  FGVYVHVPYCAARCGYCDFNTYTAADLGGALVSSVGLTTFVDIATGEVRLARTVLGEQEL 89

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +S++F GGGTP+L+   ++  +L  +   + ++S+ EIT EANP SV+    +  R AG
Sbjct: 90  VVSTVFVGGGTPTLLTADDLGRLLRILDDGFGLASDAEITTEANPESVDPAQLEQLRAAG 149

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             RIS G+QS     L  L R H        +  AR   F ++S DLIY  P ++   W 
Sbjct: 150 YTRISFGMQSSRPHVLAALDRRHTPGRVPEVMRWARKAGFDQVSLDLIYGAPGESEADWA 209

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  A+    DH+S Y LT+E+GT   +  + G+L+ P +++  D Y        A GL
Sbjct: 210 ASLDAAIQLGPDHVSAYALTVEEGTKLSRRVRRGELLEPDDDLLADRYLQADDALCAAGL 269

Query: 249 HAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            +YE+SN S        HNL YWR   + GIGPGAHS V      V     +HP  +   
Sbjct: 270 TSYEVSNWSRGTDTRCRHNLGYWRGDHWWGIGPGAHSHVG----GVRWWNVRHPAEYAAR 325

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +         +E L ++ +  E +M+G+RL EG++V + +   GR    E    L + G 
Sbjct: 326 LGAGRSPAAAREELDAQARRVERVMLGVRLAEGLAVGELDG-PGR----EATAGLAKSGL 380

Query: 368 IE--RVQFSRLRCTQRGMTMLDSVIANL 393
           +E   ++F R+R T+RG  + D+V+  L
Sbjct: 381 VEPGALEFGRVRLTRRGRLLTDTVVRAL 408


>gi|325295564|ref|YP_004282078.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325066012|gb|ADY74019.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 377

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 201/378 (53%), Gaps = 21/378 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGG 79
           YVH PFC KKCPYCDF      Y V   +F+  +   +     L  P      +++FGGG
Sbjct: 12  YVHVPFCRKKCPYCDF------YSVEDFSFVSEYEKALLSEFSLRNPEFTQFPTVYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++P     IL  I +        E+T+E NP  V +   +  ++ GVNRISLGVQS
Sbjct: 66  TPSTLKPNLFYSILSRIGQF------SEVTVELNPEDVNLCYLRNLKELGVNRISLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +  L+ LGR   + + + A+ +   +F  +S D+IY  PKQT+ + E +L  ALS+ +
Sbjct: 120 FSDNILKKLGRRQKSIDNLRALEIVFKVFSNVSIDIIYGAPKQTILELEKDLSIALSFPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY LT+ + T FYK  K+G L LP E    ++Y   +   ++ G   YEISN + L
Sbjct: 180 KHISLYALTVYEETPFYKFMKEGKLKLPEEEKLSNMYYFIEEFLTSQGFKHYEISNFALL 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNLNYW   +Y+GIG  A S V    +R       + ++++K          ++E
Sbjct: 240 GFESKHNLNYWYLENYLGIGVSAGSYV----NRKYWKNTSNLKNYIKATLYRKELPEKEE 295

Query: 320 FLSSEQQADEF-LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR--L 376
            + SE++  E  L+MGLRL EG++++  ++L      IE    ++     E + F    L
Sbjct: 296 TIYSEKEEKELKLIMGLRLIEGVNLERIQLLDSFKKAIEKSNKIRILIEEEFLIFKEPIL 355

Query: 377 RCTQRGMTMLDSVIANLA 394
           +  ++G+   ++VI+ + 
Sbjct: 356 KLGKKGLFTSNAVISEVT 373


>gi|330469604|ref|YP_004407347.1| oxygen-independent coproporphyrinogen III oxidase [Verrucosispora
           maris AB-18-032]
 gi|328812575|gb|AEB46747.1| oxygen-independent coproporphyrinogen III oxidase [Verrucosispora
           maris AB-18-032]
          Length = 409

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 181/338 (53%), Gaps = 12/338 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG---P 68
           G    GVYVH PFC  +C YCDFN++  +   G   ++ +  + L E+    ++ G   P
Sbjct: 28  GDQGFGVYVHVPFCASRCGYCDFNTYTAQELGGGASRDGYADTVLAELALAARVLGDRPP 87

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R + ++F GGGTP+L+   ++A ILD I + W ++++ E+T EANP SV   + +  R A
Sbjct: 88  RRVETVFVGGGTPTLLPADDLARILDAIDRTWGLAADAEVTTEANPESVTPASLKELRAA 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RISLG+QS+    L  L R H+A  A AA   AR+  F  ++ DLIY  P +    +
Sbjct: 148 GYTRISLGMQSVAPGVLAVLDRRHSAGRATAAALEARDAGFDHVNLDLIYGTPGEQPEDF 207

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L + ++   DH+S Y L +E GT      + G+L  P ++VA D Y   ++   A G
Sbjct: 208 AASLDQVVAAGADHVSAYALIVEDGTRLAARMRRGELPYPDDDVAADRYLAAEAALDAAG 267

Query: 248 LHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
              YE+SN +        HNL YW  GD+ G+GPGAHS V      V     KHP ++ +
Sbjct: 268 FSWYEVSNWARTPSGRCRHNLLYWTGGDWWGLGPGAHSHVG----GVRWWNVKHPTAYAQ 323

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +       + +E L++++   E +M+ LRL +G+ + 
Sbjct: 324 RLAAGRSPGLAREVLTADEARMEEVMLRLRLADGLPLD 361


>gi|256618883|ref|ZP_05475729.1| coproporphyrinogen III oxidase [Enterococcus faecalis ATCC 4200]
 gi|256598410|gb|EEU17586.1| coproporphyrinogen III oxidase [Enterococcus faecalis ATCC 4200]
          Length = 382

 Score =  212 bits (540), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 200/377 (53%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T  +    G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEVMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|302528865|ref|ZP_07281207.1| coproporphyrinogen III oxidase [Streptomyces sp. AA4]
 gi|302437760|gb|EFL09576.1| coproporphyrinogen III oxidase [Streptomyces sp. AA4]
          Length = 423

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 197/400 (49%), Gaps = 26/400 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------ENFIQSFLTEMQ 60
           E  + G G+   GVYVH PFC  +C YCDFN+    Y  G+        +++ +   E++
Sbjct: 36  ETALAGLGTRPFGVYVHVPFCATRCGYCDFNT----YTAGELGSAASPRSWLDALRRELE 91

Query: 61  WMRQLTGPRSIS-SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              ++ G    + ++F GGGTPSL+    +A +LDG+   + ++   E+T E+NP S   
Sbjct: 92  LGAEILGSAPPAETVFVGGGTPSLLGADGLAEVLDGVRSAFGLAPGAEVTTESNPESTSP 151

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
             F G R AG  R+SLG+QS     L+ L R H     + A   AR   F  ++ DLIY 
Sbjct: 152 EFFAGIRDAGYTRVSLGMQSAARHVLKVLDRVHTPGRPVDAAREARAAGFEHVNLDLIYG 211

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P + +      L   LS  VDH+S Y L +E GT   +  + G+L  P ++     Y L
Sbjct: 212 TPGERVEDLRASLDAVLSAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDTLASYYEL 271

Query: 239 TQSITSAHGLHAYEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
             S+ ++ GL  YE+SN  S   A   HNL YW+ GD+ G GPGAHS V      V    
Sbjct: 272 IDSVLASAGLTWYEVSNWVSDEAARCRHNLGYWQGGDWWGAGPGAHSHVG----GVRWWN 327

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KHP  +  ++ +      ++E L+ E +  E +M+ LR+ +G+++   +        ++
Sbjct: 328 VKHPAKYSSLLAEGQSPEADREVLTPEDRHLERIMLELRISDGLALSALD-----EAGLK 382

Query: 358 CERNLQRQGFIERVQF---SRLRCTQRGMTMLDSVIANLA 394
             R    +G +E+       R   T RG  + D+V+  LA
Sbjct: 383 EARAAAAEGLLEQSDLDSQGRAVLTDRGRLLADAVVRRLA 422


>gi|160890876|ref|ZP_02071879.1| hypothetical protein BACUNI_03321 [Bacteroides uniformis ATCC 8492]
 gi|156859875|gb|EDO53306.1| hypothetical protein BACUNI_03321 [Bacteroides uniformis ATCC 8492]
          Length = 376

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 192/377 (50%), Gaps = 10/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     ++ +I++  TE++  +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTR--SELKQQYIRALCTELKTRKGYLKEEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I + +      EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAHEDFEQIFRTIKEVYGTEHAEEITLEANPDDLTEEYVSMLRTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  +L+ L R HNA++AI A+H  R   F  +S DLIY LP +T  +WE +LQ+A+   
Sbjct: 121 FDAPTLKLLNRRHNAAQAIVAVHRLRQAGFRNISIDLIYGLPDETDQRWERDLQQAVGLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  +V  ++       A G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTRIYEMLQSHRISEVDEESSVRFFSALMDTLGAAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G GP AHS           S+    E ++K + + GH   E 
Sbjct: 241 PGMYSRHNTAYWKGIPYLGCGPSAHSFNAETREWNTASL----EGYIKSI-EEGHRSSET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRL 376
           E L    + +E++M  LR   GIS+   E   G  L   C +      Q     +Q  RL
Sbjct: 296 EILDKVTRYNEYIMTSLRTMWGISLTYTEEAFGTELCQYCTKMAAPYLQSHKLEMQADRL 355

Query: 377 RCTQRGMTMLDSVIANL 393
           R T+ G+ + D +I++L
Sbjct: 356 RLTREGIFVSDGIISDL 372


>gi|119475466|ref|ZP_01615819.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
 gi|119451669|gb|EAW32902.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
          Length = 383

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 210/379 (55%), Gaps = 18/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           L +Y+H P+CV+KCPYCDFNSH     + +  +I   + ++ Q +  + G RS+ SIFFG
Sbjct: 13  LSLYIHIPWCVRKCPYCDFNSHTTSV-IPESLYIDVLIEDLTQELANVQG-RSLHSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     IA IL  + +  +   ++EIT+EANP S E + F GY  AGVNR+S+GV
Sbjct: 71  GGTPSLFSAAGIARILTEVERRISFCRDIEITLEANPGSAEQHKFSGYSAAGVNRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+ +EAIAA   AR       + DL++ LP QT  +   ++Q+A+ 
Sbjct: 131 QSFNPVHLSSLGRIHSNTEAIAAADAARRAGISNFNIDLMHGLPDQTQPEGLADIQQAID 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T+FY    +    LPS++   D+ +    +        YEIS +
Sbjct: 191 LEPTHISWYQLTIEPNTVFY----NSPPTLPSDDQLADIQDAGDEMLGNAAFSQYEISAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           S     S HN NYW +GDYIGIG GAH ++  + S ++    + + P+ +L      G  
Sbjct: 247 SRDNQFSKHNTNYWLFGDYIGIGAGAHGKITDICSQQIVRRWKTRSPKDYLS--SDTGLI 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---LAGRNLDIECERNLQRQGFIERV 371
             +++ +++E    EFLM GLRL +G     +     LA  ++  + ++ +QR+  + + 
Sbjct: 305 AGDRQLIAAELPL-EFLMNGLRLNDGFETDLFTARTGLAWESMQPKLDQLIQRK--LLKH 361

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q   LR T  G   L++++
Sbjct: 362 QSGNLRATAAGKRFLNTIL 380


>gi|158523028|ref|YP_001530898.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfococcus oleovorans Hxd3]
 gi|158511854|gb|ABW68821.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfococcus oleovorans Hxd3]
          Length = 393

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/386 (33%), Positives = 205/386 (53%), Gaps = 11/386 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T  G ++ G+Y+H PFC KKC YCDF S     ++   +F+++ L E+Q    L  P  +
Sbjct: 8   TYPGVDNTGLYLHIPFCAKKCRYCDFFSLAAPDRIF--SFVKALLREIQLSGPLV-PGMV 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTPSL+    + ++L  +  N+ +S++ EIT+E NP S         R+AGVN
Sbjct: 65  DTVYIGGGTPSLLSAAQVDVVLSTVRDNFRLSTDAEITMEVNPDSATPAWLAAVRQAGVN 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RI++G+QS ++  L FLGR H+A +A  A+  +R   F  +  D+IYA+P QT    E +
Sbjct: 125 RINIGIQSFDDARLAFLGRIHSARQAEDALEASRRCGFDNIGADIIYAIPGQTRRDLEKD 184

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R LS++ DH+S Y LT E GT   +  ++ +     +  A DL++      +  G   
Sbjct: 185 LDRTLSFSPDHISCYMLTCEPGTPLARALENREFDPLPDRQAADLFDTVSRYLTGRGYLH 244

Query: 251 YEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YEISN +      + HN  YWR   Y+G+GP AHS    G+HR      +  +++ K ++
Sbjct: 245 YEISNFATSPDTMARHNTKYWRRVPYVGLGPSAHS--YTGTHR--WWNHRDLDAYEKALQ 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           +      E E L+  QQ  E + +GLR  +GI +  +E   G +      + L +     
Sbjct: 301 QGRPPRQEAETLTPAQQMLEAIYLGLRTADGILMAAFEAEFGVDFCACFAQPLAQCRDQG 360

Query: 370 RVQFSRLRC--TQRGMTMLDSVIANL 393
            V  SR RC  T+RGM   ++V A  
Sbjct: 361 LVVLSRGRCMPTRRGMRFHETVTARF 386


>gi|6468470|emb|CAB61616.1| hemN [Bacillus subtilis subsp. subtilis str. 168]
          Length = 366

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 7/337 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGQPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E     ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSSNTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGMESKHNLTYWSNEQYFGFGAGAHGYIG-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +++E+Q +E + +GLR   G+S K +    GR+LD
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLD 335


>gi|322375510|ref|ZP_08050023.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C300]
 gi|321279773|gb|EFX56813.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C300]
          Length = 376

 Score =  212 bits (539), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 211/376 (56%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E          + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFHSY----DIQKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + L+LDG++KN  +S   E+TIEANP  ++ +     +++ VNR+SLGVQ+
Sbjct: 62  TPTALSAPQLELLLDGLSKNLDLSVLEELTIEANPGDLDADKIAVLKQSPVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            + + L+ +GR+H   +  + I  + LA   F  +S DLIYALP QTM Q +  + +A+S
Sbjct: 122 FDNKMLKKIGRSHLEKDIYDNIDRLKLAG--FDNISIDLIYALPGQTMAQVKDNVAKAIS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    +R    I +H   +L  V + G+A +
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYRNHGPI-RH---YLNAV-EAGNARI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG ++ +  
Sbjct: 295 TEEHLSQREQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLMQ-IDG 353

Query: 374 SRLRCTQRGMTMLDSV 389
            R+R T+RG+ + D+V
Sbjct: 354 DRVRMTKRGLFLGDTV 369


>gi|254519882|ref|ZP_05131938.1| coproporphyrinogen III oxidase [Clostridium sp. 7_2_43FAA]
 gi|226913631|gb|EEH98832.1| coproporphyrinogen III oxidase [Clostridium sp. 7_2_43FAA]
          Length = 377

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 217/383 (56%), Gaps = 18/383 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC +KC YCDF S+     + +++++ +   E+    +      I SIF GG
Sbjct: 7   IALYIHIPFCKQKCFYCDFPSYASLDHL-KDDYVDALCKEID---EKVIDYKIKSIFIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +E   I  +L  I+K   ++ N+E T+E NP ++E    +     GVNRIS+G+Q
Sbjct: 63  GTPSYLEINQIYKLLKTISK-LNLTENMEFTMECNPGALEKEKLETMLSGGVNRISMGLQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++   L+ +GR H+  +     +LAR + F  ++ DL++ LP Q + +W+  L+     
Sbjct: 122 AVQNSLLKDIGRIHSFKQFEENFNLARKVGFKNINVDLMFGLPNQKVDEWKESLETIAKL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L IE+GT+FYK+ +   L+LPSE+   ++Y+ T+ I   HG + YEISN+S
Sbjct: 182 NPEHISAYSLIIEEGTVFYKLWERNKLILPSEDDEREMYSTTKEILKEHGYNQYEISNYS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN  YWR  DY+G+G  + S   +   R+  +IE   +S+++ V  N   + E
Sbjct: 242 KPGYECYHNKVYWRCDDYLGVGSASSSF--IDGKRIK-NIE-DVKSYIEKVNSNESVIEE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DIECERNLQRQGFIERVQ 372
               S E   +EF+ MGLR+  G+S+ +++   G ++     D+  E+N+ ++  +  ++
Sbjct: 298 VIENSKEDNMEEFIFMGLRMNVGVSINEFKGRFGIHINSIYKDV-IEKNINKKLLV--LE 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              LR T +G+ + + V+++  +
Sbjct: 355 NDILRLTDKGIELSNLVMSDFIL 377


>gi|261418475|ref|YP_003252157.1| coproporphyrinogen III oxidase [Geobacillus sp. Y412MC61]
 gi|297529327|ref|YP_003670602.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           C56-T3]
 gi|319767564|ref|YP_004133065.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y412MC52]
 gi|261374932|gb|ACX77675.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y412MC61]
 gi|297252579|gb|ADI26025.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           C56-T3]
 gi|317112430|gb|ADU94922.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y412MC52]
          Length = 379

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 206/381 (54%), Gaps = 16/381 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++  Y H PFC   C YCDFN   + +  GQ  ++++++   EM W     G + + ++F
Sbjct: 2   AVSAYFHIPFCAHICHYCDFN---KVFAAGQPIDDYLRAMDKEMAWTAAEFGSQ-LKTLF 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+++EP  +  +L  I +++       E T+EANP  +        R AGVNR+S
Sbjct: 58  IGGGTPTVLEPAQLGCLLASIHRHFQFDPQTAEFTVEANPDGLTKEKLAILRDAGVNRLS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ ++Q L+ +GR H   + I A+ LAR + F  +S D++Y LP QT+ Q+  +L+ 
Sbjct: 118 LGVQTFDDQLLQTIGRTHRRGDVIRAVALAREVGFQNISIDVMYGLPGQTLEQFTADLEA 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A S  V HLS Y L +E  T+FY   + G L LP E +  ++Y       +A G   YEI
Sbjct: 178 AFSLHVPHLSAYSLILEPRTIFYNEWRKGRLRLPGEEMEAEMYEAAMEQMAAAGYRQYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G ES HNL YW   +Y GIG GAHS +  G  R  I   +H   ++  + +   
Sbjct: 238 SNYALPGFESRHNLTYWNNEEYYGIGAGAHSYID-GVRRANIGPIRH---YISAIERGQW 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIER 370
              +   L++ +Q +E + +GLR  EG+S   +    GR+L       ++R+   G +E 
Sbjct: 294 PHRDVRRLTTREQMEEEMFLGLRKTEGVSKACFRQKFGRDLHDIFGAAIRREIENGRLEE 353

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
            + + +R T+RG  + + V A
Sbjct: 354 TE-THIRLTKRGKLLGNEVFA 373


>gi|51891621|ref|YP_074312.1| coproporphyrinogen III oxidase [Symbiobacterium thermophilum IAM
           14863]
 gi|51855310|dbj|BAD39468.1| coproporphyrinogen III oxidase [Symbiobacterium thermophilum IAM
           14863]
          Length = 416

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 213/414 (51%), Gaps = 46/414 (11%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-W-MRQLTGPRSISSIF 75
            +G+YVH PFC+ KC YCDFNSH    +  Q +++ + L EM+ W  R       +S+++
Sbjct: 2   PIGLYVHIPFCLHKCGYCDFNSHAGSDRAEQAHYVDALLREMELWATRPEVAGEQVSTVY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRI 133
            GGGTP+L+E   +A +L G+ +++ ++ + E+T+E NP +V+V   + +   +AG  R+
Sbjct: 62  VGGGTPTLLEGAELARVLRGVREHFRLAPDAEVTVEGNPGTVDVEGEKLHLAVQAGATRL 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +   L  LGR H+A +  AA+  AR   F  ++ DL+Y LP QT   +   + 
Sbjct: 122 SLGVQARQRHLLERLGRIHDALQVEAAVKAARRAGFANLNLDLMYGLPGQTPADFRETVS 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL     H+S Y L IE+GT FY  +  G L LP E     ++   +++  A G   YE
Sbjct: 182 WALGLGPTHISAYSLIIEEGTPFYHAYLAGRLHLPPEEAEEQMFLEGKALLEAAGFEHYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-------VGSHRVAISIE------- 298
           +SN +  G    HNL YWR   Y+G+G GAHS ++       +G  R  ++         
Sbjct: 242 VSNWARPGFRCRHNLIYWRNEHYLGLGCGAHSFLRLAAPLSNLGPPRPGLTASRVQGGSP 301

Query: 299 -----------------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                            KHP ++   + +    V   E +    +  E + MGLRL EG+
Sbjct: 302 VETAPGLPGQQYRFWNLKHPGAYRAALERGVLPVEAGEVVDRRAEMAETMFMGLRLLEGV 361

Query: 342 SVKDWEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           S + +E   G ++      D++    L+R+G +E  + + LR T RG+ + + V
Sbjct: 362 SGERFEARFGVSIADVYGPDVD---RLRREGLLEWAEGA-LRLTPRGLRLGNRV 411


>gi|291548504|emb|CBL21612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus sp. SR1/5]
          Length = 378

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 214/389 (55%), Gaps = 19/389 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M  +    L +Y+H PFCVKKC YCDF S     K  Q  + Q+   E+  +   +  R 
Sbjct: 1   MENEAKKPLELYIHIPFCVKKCDYCDFLSGPAG-KERQREYFQALEREIAAVPDFSD-RE 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I+++F GGGTPS+ +P  +  +LD I   + V+ + EITIEANP ++     Q Y + G+
Sbjct: 59  ITTVFIGGGTPSVPDPSLVGEMLDQIRNKFFVAPDAEITIEANPGTLYKEKLQIYLEHGI 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLG+QS + + L+ LGR H   E   +  +AR+  F  ++ DL+ A+P+QT   WE 
Sbjct: 119 NRLSLGLQSPQNRELKILGRIHTWEEFQESFFMARDAGFSNINIDLMSAIPEQTYADWEK 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + +H+S Y L IE+GT F     +  L LP E+    +Y  T  I   +G H
Sbjct: 179 NLRTVAGLSPEHISAYSLIIEEGTPF----GERKLKLPDEDTEYRMYENTAGILEEYGFH 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKM 307
            YEISN++  G E  HN  YW+  DY+G+G GA S ++         ++++    ++   
Sbjct: 235 QYEISNYAKGGRECRHNKGYWQRIDYLGLGLGASSLLEHMRFSNTADMKEYIGNSAFPDK 294

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ-- 365
           +R+N  ++ E + ++      EF+ +GLR+ EG+S++ +    G+N++      L++   
Sbjct: 295 IRQNMESLTEADEMA------EFMFLGLRMTEGVSMEAFAEYFGKNMENVYGEVLKKHLE 348

Query: 366 -GFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G +E+ +  R+  +++G+ + + V+A+ 
Sbjct: 349 IGMLEQ-KGDRIYLSRKGIHVSNGVMADF 376


>gi|323480535|gb|ADX79974.1| oxygen-independent coproporphyrinogen III oxidase 1 [Enterococcus
           faecalis 62]
          Length = 394

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 18  AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 75  GTPTSLSAKQLDVLLKGVREQLTFDDQNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 135 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 194

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 195 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 255 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 310

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 311 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 370

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 371 --LRLTKKGLFVGNNVF 385


>gi|29375873|ref|NP_815027.1| coproporphyrinogen III oxidase [Enterococcus faecalis V583]
 gi|229546018|ref|ZP_04434743.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX1322]
 gi|256852946|ref|ZP_05558316.1| coproporphyrinogen III oxidase [Enterococcus faecalis T8]
 gi|294781172|ref|ZP_06746521.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis PC1.1]
 gi|29343335|gb|AAO81097.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Enterococcus faecalis V583]
 gi|229308861|gb|EEN74848.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX1322]
 gi|256711405|gb|EEU26443.1| coproporphyrinogen III oxidase [Enterococcus faecalis T8]
 gi|294451739|gb|EFG20192.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis PC1.1]
          Length = 394

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 18  AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 75  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 135 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 194

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 195 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 255 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 310

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 311 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 370

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 371 --LRLTKKGLFVGNNVF 385


>gi|210623842|ref|ZP_03294091.1| hypothetical protein CLOHIR_02042 [Clostridium hiranonis DSM 13275]
 gi|210153337|gb|EEA84343.1| hypothetical protein CLOHIR_02042 [Clostridium hiranonis DSM 13275]
          Length = 376

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 207/379 (54%), Gaps = 16/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+H PFCVKKC YCDFNS  +     ++ ++     E++        R + +IFFGG
Sbjct: 2   FGVYIHIPFCVKKCKYCDFNS-FKMNLCDKKRYLDDLKKEIKMYSGECADRIVDTIFFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    I  ++  +  ++ +S + EIT+E NP +++    +  +++G+NR+S+G+Q
Sbjct: 61  GTPSILSCDEIESLMKCVKDSFNISDDTEITMECNPGTIDRKKLETIKRSGINRLSIGLQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++   L ++GR H   E       AR++ F  ++ DL++ALP QT   W+  L++ +  
Sbjct: 121 AVQNHHLSYIGRIHTYEEFEKNFKEARSVGFDNINIDLMFALPNQTEDDWKESLEKVVGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +E+GT  + M++  +  L  E+  +++Y  T +    +G + YEISN+S
Sbjct: 181 NPEHISAYSLIMEEGTELFDMYEREEFELMDEDRDIEMYEYTINYLKNNGYNQYEISNYS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN+ YW+  +Y+G+G GA   +     R   + E +  S+ K +      ++ 
Sbjct: 241 KEGKECRHNIIYWQCDNYLGLGAGAAGYLA----RDRYTNESNLNSYHKKIESGKKPIIS 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER------NLQRQGFIERV 371
            E LS E+  +E + MGLR+  GI+  D++   G      C++      +L  +G +  V
Sbjct: 297 VENLSDEEMMEEMVFMGLRMNSGINRIDFKNRFGVEF---CDKYKKQVEDLAERGLLSVV 353

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +   ++ TQ+G  + +SV 
Sbjct: 354 E-ENIKLTQKGREISNSVF 371


>gi|294790840|ref|ZP_06755998.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Scardovia inopinata F0304]
 gi|294458737|gb|EFG27090.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Scardovia inopinata F0304]
          Length = 419

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 196/387 (50%), Gaps = 16/387 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEM----QWMR-QLTGPRSIS 72
           +Y+H PFC+++C YCDFN++      G   ++N+    + EM    QW   Q     ++S
Sbjct: 29  LYIHVPFCMRRCGYCDFNTYTASDLGGGASRDNYANLAVQEMVLVKQWQEEQGIKEPALS 88

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++   ++  IL      W +    EIT EANP +V+ N        G  R
Sbjct: 89  TVFFGGGTPTILPAHDLISILSAARDIWGICEGAEITTEANPDTVDSNYIHQLADGGFTR 148

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L  L R H  +   + +  A+    R S DLIY  P +++ QWE+ L+
Sbjct: 149 ISFGMQSAVPSVLATLDRTHTPAHVESGVRAAQKAGLRTSLDLIYGTPGESLDQWEVSLR 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V H+S Y LT+E  T   +    G L  P ++   + Y L + + +  GL  YE
Sbjct: 209 AALDLGVTHISAYALTVEPHTAMGRRISRGQLPAPDDDDQAEKYRLAERMLTDAGLSWYE 268

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN +  G ES HNL YW   D+ GIGPGAHS       R A  I  HP +W + +  + 
Sbjct: 269 VSNWALPGDESRHNLGYWHNIDWAGIGPGAHSHYNFQPLR-AWDI-AHPRAWAQTMTDDK 326

Query: 313 HAVVE-KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGF 367
               + +E +S  +  +E +++G+R+R+G+S+   + LA R     LD     +L+ +G 
Sbjct: 327 RVPWQGQENISPSENLEEAILLGVRIRDGLSLDLTDSLAVRQGLEPLDESVIHDLESEGL 386

Query: 368 IERVQFSR-LRCTQRGMTMLDSVIANL 393
           +      R L  T  G  + D VI  L
Sbjct: 387 VTVTTEPRILTPTLNGRLLNDLVIERL 413


>gi|255525330|ref|ZP_05392270.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           carboxidivorans P7]
 gi|296188198|ref|ZP_06856590.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium carboxidivorans P7]
 gi|255511002|gb|EET87302.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           carboxidivorans P7]
 gi|296047324|gb|EFG86766.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium carboxidivorans P7]
          Length = 383

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 17/332 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC +KC YCDF S   +     EN +  +   +    +    RSI +IF GG
Sbjct: 13  VALYIHIPFCKQKCLYCDFPSFANK-----ENLMLDYSKALASDIESCSRRSIKTIFIGG 67

Query: 79  GTPSLIEPQ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GTP+ +  +   NI   +D + K    + ++E T+E NP +      +  ++ GVNR+S+
Sbjct: 68  GTPTYLTLEAWGNIKKAIDILKK----TKDLEFTVEGNPGTFTKEKLKFLKEMGVNRLSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +   L  LGR H   + I +  +ARNI F  ++ DL++ LP+Q M QW+  L + 
Sbjct: 124 GLQCWQNNILEKLGRIHTVQDFIKSYEMARNIGFQNINVDLMFGLPEQNMEQWQETLDKV 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  + +H+S Y L IE+GT FY M + G L+ P E +   +Y        + G   YEIS
Sbjct: 184 VELSPEHISCYSLIIEEGTPFYSMDQKGKLIFPEEEMERKMYRYGIKFLKSKGYRQYEIS 243

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G E  HNL YW   +YIG G GAHS +    +R   SI++    ++K VR+N + 
Sbjct: 244 NFSKPGKECKHNLVYWNLQEYIGCGSGAHSYIDNLRYRKNESIQE----YIKNVRENKNL 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            ++K   S E   +EF+ MGLR   GIS+ ++
Sbjct: 300 KLDKHENSKEDNIEEFVFMGLRKISGISITEF 331


>gi|160946316|ref|ZP_02093525.1| hypothetical protein PEPMIC_00276 [Parvimonas micra ATCC 33270]
 gi|158447432|gb|EDP24427.1| hypothetical protein PEPMIC_00276 [Parvimonas micra ATCC 33270]
          Length = 379

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 204/379 (53%), Gaps = 15/379 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           LG+Y+H PFC + C YCDF +       G  + I+ ++  ++   +L G ++  I SIF 
Sbjct: 4   LGLYIHIPFCDRICNYCDFTAFQ-----GANSKIKEYVEALKKEIELKGNKNFLIDSIFI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+ + I  IL+ + +N+TV  N+EI+IE NP + +    + Y+ A +NR+S+G
Sbjct: 59  GGGTPSFIDGKYIFEILEKVKENFTVLDNIEISIETNPKTFDKRKLEYYKSAKINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS  +  L+ LGRNHN+ EA  +I L +     ++ DLI+    QT+     +L+   +
Sbjct: 119 VQSFNDVILKELGRNHNSKEAFDSIELVKKFDFDINLDLIFGYQSQTIEDILYDLEMVKN 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L IE+ T F  +   G L    E     +Y+L        G++ YE+SN 
Sbjct: 179 INPEHISYYALIIEEKTKFKALQNAGKLDFLDEETERKMYHLIVEKLEEMGMNQYEVSNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           + +G ES+HN  YW   +Y+G+G  AHS +        +++ K+ +        NG+  V
Sbjct: 239 AKVGKESVHNKKYWNCKEYLGLGISAHSYLNDERFSNTVNLSKYIKELY-----NGNIPV 293

Query: 317 E-KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQF 373
           + +E L    +  E+++M +RL+EG  + D+  L   +   E ++ ++   +  +  ++ 
Sbjct: 294 DFREKLDMPTKKFEYIIMNMRLKEGFLISDYNRLFESDFLEENKKAVKIGLENNVVEIKD 353

Query: 374 SRLRCTQRGMTMLDSVIAN 392
            R+  T+RG  ++DS   N
Sbjct: 354 DRIYFTKRGFDIMDSFFVN 372


>gi|258511966|ref|YP_003185400.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478692|gb|ACV59011.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 388

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 190/354 (53%), Gaps = 11/354 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C YCDF + V+      E ++ + + E   M  L  P  +++ +FGGGT
Sbjct: 13  LYVHIPFCKSRCFYCDFTTFVKS-PAAMEAYVDALVAEWDLMEPLEAP--LATAYFGGGT 69

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+L     +  +LD + + +   ++ EIT E+NP S+     +  R  GVNRIS G Q+ 
Sbjct: 70  PTLFSASLLDRLLDAMRQRFEFCADAEITFESNPDSITREKLRVLRDHGVNRISFGAQAF 129

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++  L+ +GR H       A+  AR++ FP ++ DL++ LP QT+      ++  L   V
Sbjct: 130 QDHLLQAIGRAHLRDAIEEAVWAARDLGFPHVNIDLMFGLPDQTLHDVAESVEAVLRLPV 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L IE GT F K H+ G L LP E+   D+Y L + +    G   YEISN +  
Sbjct: 190 DHVSAYWLKIEPGTPFAKWHEMGLLSLPGEDAEADMYRLVRDVLRDAGFVHYEISNFARP 249

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E+ HNL YWR   Y   G GAH   +   +    ++E+   ++L  VR+    V  ++
Sbjct: 250 GGEARHNLVYWRNEPYCASGVGAHGYARGERY----AMERRFSAYLAAVREGRRPVSARQ 305

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
            +   ++A++ +++GLRL EG+  + +E   GR ++      ++R   +G +ER
Sbjct: 306 RVPVAERAEDQVILGLRLAEGVDRQRFERRFGRTIEDVFPGVVERLLAEGLLER 359


>gi|28211656|ref|NP_782600.1| coproporphyrinogen III oxidase [Clostridium tetani E88]
 gi|28204098|gb|AAO36537.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 382

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 192/339 (56%), Gaps = 12/339 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
           ++G+Y+H PFC +KC YCDF S+ ++     E+F++ ++  + + +++    + I SI+ 
Sbjct: 10  NIGLYIHIPFCKEKCKYCDFISYSKK-----ESFMKEYIEALSKEIKRECMDKKIRSIYI 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS + P     IL     N   S N+E +IEANP +V     + +++ G+NRIS G
Sbjct: 65  GGGTPSYV-PNKYWEILKETIDNLNKSKNLEFSIEANPGTVTEEKLKFFKEMGINRISFG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ +   L  LGR HN  E + +  LAR + F  ++ DL++ +P Q +  W+  L++ +
Sbjct: 124 LQAWQHHLLNKLGRIHNIEEFLYSYKLARKLGFDNINVDLMFGIPDQKLENWKETLEKIV 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L +E+GT FYK+++ G L LP+E++  D+Y          G H YEISN
Sbjct: 184 ELNPEHISCYSLIVEEGTPFYKLYEKGKLNLPNEDIERDMYRYAIEFLENKGYHQYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    E +HNL YW   +YIG G  AHS +K   +    +I    E ++K++ +N +  
Sbjct: 244 FSKEHRECIHNLIYWDLEEYIGCGLAAHSFLKGYRYSNVHNI----EDYIKLINENKNIK 299

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +      ++   +EF+ MGLR  +GI+ +++     +N+
Sbjct: 300 INTYKNLTKDTMEEFMFMGLRKIKGINTEEFYKRFHKNI 338


>gi|332670862|ref|YP_004453870.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           fimi ATCC 484]
 gi|332339900|gb|AEE46483.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           fimi ATCC 484]
          Length = 417

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 197/398 (49%), Gaps = 21/398 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGP- 68
           G  + + GVY+H PFC  +C YCDFN++      G   Q+ +  + L E+     +    
Sbjct: 24  GAAARAFGVYLHVPFCTVRCGYCDFNTYTATELGGGASQDAYAATALAEVGLAAHVLDAA 83

Query: 69  ----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R++S++F GGGTP+++   ++A +L G+   W ++ + E+T EANP SV   +   
Sbjct: 84  GLPARAVSTVFVGGGTPTVLPVDDLARLLGGVRDTWGLTPDAEVTTEANPDSVTPASLAA 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AG  R+S G+QS     L  L R H+       +  AR+    +S DLIY  P +++
Sbjct: 144 LAAAGFTRVSFGMQSAVPHVLATLERTHDPRRIPDVVRWARDAGLAVSLDLIYGTPGESL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   ++ AL+  VDH+S Y L +E+GT      + G+L LP  +     Y L   + +
Sbjct: 204 DDWRASVETALATGVDHVSAYALVVEQGTRMAVQVRRGELALPDADDQAAKYELADDLLT 263

Query: 245 AHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GL  YE+SN +   A++  HNL YWR  D+ G+GPGAHS V      V     KHP +
Sbjct: 264 AAGLAWYEVSNWARTPADACRHNLAYWRGDDWWGVGPGAHSHVG----GVRWWNVKHPRA 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-------I 356
           +   + +       +E +  E  A E LM+G+R   G+ V D    A R +        +
Sbjct: 320 YADRLARGLSPAAGREVVDGESAALERLMLGVRTAHGLPVADLSPDARRAVAGLVADGLV 379

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +    L R    + V   R+  T+RG  + D+V+  LA
Sbjct: 380 DGRAALARPTADDPVG-PRVLLTRRGRLLADAVVRALA 416


>gi|146319095|ref|YP_001198807.1| coproporphyrinogen III oxidase [Streptococcus suis 05ZYH33]
 gi|146321297|ref|YP_001201008.1| coproporphyrinogen III oxidase [Streptococcus suis 98HAH33]
 gi|253752147|ref|YP_003025288.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis SC84]
 gi|253753972|ref|YP_003027113.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis P1/7]
 gi|253755907|ref|YP_003029047.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis BM407]
 gi|145689901|gb|ABP90407.1| coproporphyrinogen III oxidase [Streptococcus suis 05ZYH33]
 gi|145692103|gb|ABP92608.1| coproporphyrinogen III oxidase [Streptococcus suis 98HAH33]
 gi|251816436|emb|CAZ52069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus suis SC84]
 gi|251818371|emb|CAZ56197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus suis BM407]
 gi|251820218|emb|CAR46634.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus suis P1/7]
 gi|292558732|gb|ADE31733.1| coproporphyrinogen III oxidase [Streptococcus suis GZ1]
 gi|319758530|gb|ADV70472.1| coproporphyrinogen III oxidase [Streptococcus suis JS14]
          Length = 375

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/375 (33%), Positives = 210/375 (56%), Gaps = 18/375 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC + C YCDF S V       ++++ + + E+++        ++ +++ GGGT
Sbjct: 8   AYIHIPFCTQICYYCDF-SKVFIKNQPVDDYLVALMEEVKFY----DLPALKTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  + +  +L  +     +S   E TIEANP  +  +     +K+  NR+SLGVQ+ 
Sbjct: 63  PSALSAEQLDYLLTNLEDLLDLSQLEEFTIEANPGDLTADKIAVLKKSKCNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+HN +   E IAA+  A   F  +S DLIYALP QTM Q    + +AL  
Sbjct: 123 DDRMLKKIGRSHNQAQIYETIAALKEAG--FHNISIDLIYALPGQTMEQVVDNVAKALEL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G+L LP+E+V  D+++        +G   YEISN +
Sbjct: 181 DIPHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDMFDYILQELEKNGFEHYEISNFT 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G+G GA   +    +R    I    + +LK +R+ GH+ + 
Sbjct: 241 KPGFESHHNLMYWDNSEYYGLGAGASGYIDGMRYRNRAPI----QHYLKSIREKGHSRLH 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
           +EFLS  +Q +E + +GLR + G+S++ +E   G + +    +  R+L+ +G ++  +  
Sbjct: 297 EEFLSKTEQMEEEMFLGLRKKTGVSIERFEKKFGISFEDRYGQVVRDLKNEGLLQE-EDC 355

Query: 375 RLRCTQRGMTMLDSV 389
            LR T++G+ + D+V
Sbjct: 356 WLRMTKKGLFLGDTV 370


>gi|229550209|ref|ZP_04438934.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis ATCC 29200]
 gi|300859895|ref|ZP_07105983.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TUSoD Ef11]
 gi|307277568|ref|ZP_07558660.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2134]
 gi|312952302|ref|ZP_07771177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0102]
 gi|229304647|gb|EEN70643.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis ATCC 29200]
 gi|300850713|gb|EFK78462.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TUSoD Ef11]
 gi|306505833|gb|EFM75011.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2134]
 gi|310629686|gb|EFQ12969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0102]
 gi|315147785|gb|EFT91801.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4244]
          Length = 394

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 18  AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 75  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 135 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 194

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 195 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 255 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 310

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 311 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIEEADI 370

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 371 --LRLTKKGLFVGNNVF 385


>gi|304439649|ref|ZP_07399552.1| coproporphyrinogen III oxidase [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371889|gb|EFM25492.1| coproporphyrinogen III oxidase [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 373

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 206/377 (54%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFGGG 79
           +Y+H PFC+KKC YCDF S+    +   EN+ +  + EM     +  P+  I+SIF GGG
Sbjct: 4   IYIHIPFCIKKCNYCDFTSYSCISEENIENYFKYLIKEMG----MNPPKDEINSIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ + I  I + + K +  + ++EIT+EANP+S+     + Y+  G+NRIS+GVQS
Sbjct: 60  TPSFVDSKYIEDIFN-VLKKYPWTEDIEITLEANPNSITKEKLKVYKDLGINRISMGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L+ +GR H  S+  +A    R + F  ++ DL+ ALP Q M   E  L+      
Sbjct: 119 FNEDILKKIGRVHKNSDTFSAAKNIREVGFKNLNLDLMLALPDQKMDDVEDSLREIEKLN 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L IE GT   K +++G    P+E +   +Y+         G H YEISN + 
Sbjct: 179 PEHISYYSLIIEPGTPMEKFYEEGRYTFPNEELDRKMYHRVVEGLENLGYHQYEISNFAK 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HNL YW+  +Y+G G  A S   +G +R   +   + + + +M+ +     + +
Sbjct: 239 SGYESVHNLRYWKIKEYLGYGLSASS--SIGEYRYTNT--DNFKDYFEMIDEGRLPQIFR 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI------ECERNLQRQGFIERVQ 372
           E L +  +  E+++MGLRL +G+ ++D E   G  +DI      E E+NL+ +    R++
Sbjct: 295 ERLKNIDRLHEYMIMGLRLNDGVDIEDAENRFG--IDIKKYYKEEIEKNLKYKTI--RME 350

Query: 373 FSRLRCTQRGMTMLDSV 389
            +R+  T  G  + + V
Sbjct: 351 NNRIFLTDYGRDISNQV 367


>gi|257089709|ref|ZP_05584070.1| coproporphyrinogen III oxidase [Enterococcus faecalis CH188]
 gi|256998521|gb|EEU85041.1| coproporphyrinogen III oxidase [Enterococcus faecalis CH188]
 gi|315578402|gb|EFU90593.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0630]
          Length = 382

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDALTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|149173350|ref|ZP_01851980.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
 gi|148847532|gb|EDL61865.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
          Length = 394

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 202/380 (53%), Gaps = 20/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGG 79
            Y H PFC  +C YCDF    ++     ++ I+++L  M + M +L     + ++F GGG
Sbjct: 27  AYFHVPFCQHRCGYCDFTLVAQK-----DHLIEAYLDAMAKQMSELGEGIELKTLFLGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + ++ + + I  ++ ++++ E +IEANP ++     +  +++GVNR+SLGVQS
Sbjct: 82  TPTHLSIEQLSHLFESIFSHFRLAADYEFSIEANPLNLTSEKIEFLKQSGVNRVSLGVQS 141

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + + L FL R+H   +    +   ++     S DLI+A+P Q++  W+  LQ A+   +
Sbjct: 142 FDSEILTFLERDHQPDQIFEIVKSLQSRISNTSLDLIFAVPGQSLAGWKQTLQNAVQLNI 201

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LTIEKGT F+   K G   LP +++A D+Y          GL  YEISN +  
Sbjct: 202 PHISTYGLTIEKGTSFWSREKAGLFDLPQDDLAGDMYEYALEFLDQAGLQHYEISNFARP 261

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           G E  HN  YW    Y G GPGA S    ++  +HR  I       +WLK V+     +V
Sbjct: 262 GYECRHNEVYWTGYPYFGFGPGAASYLDGIRRQNHRSVI-------TWLKRVQAGESPIV 314

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           ++E L  E +A E ++ GLR R GI+ ++++   G +L    E  ++     G +E    
Sbjct: 315 DQEELEPEARAREAIIFGLRRRAGINRREFQERYGFDLHQLAETAIRTNLEAGLLEETD- 373

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           + L+ T  G  + DS++ + 
Sbjct: 374 THLKLTSAGCLLADSIVVDF 393


>gi|307706871|ref|ZP_07643673.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           mitis SK321]
 gi|307617744|gb|EFN96909.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           mitis SK321]
          Length = 376

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 211/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E Q        + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFQSY----DIQKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DNKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKDNVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KSGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNARIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG ++ ++  
Sbjct: 296 EEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIVRDLVQQGLVQ-IEGE 354

Query: 375 RLRCTQRGMTMLDSV 389
           R+R T+RG+ + D+V
Sbjct: 355 RVRMTKRGLFLGDTV 369


>gi|213692358|ref|YP_002322944.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523819|gb|ACJ52566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320458497|dbj|BAJ69118.1| putative coproporphyrinogen III oxidase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 392

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 193/384 (50%), Gaps = 19/384 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           +Y+H PFC+++C YCDFN++          + ++ Q  + EM  +RQ      I     S
Sbjct: 5   IYIHVPFCLRRCGYCDFNTYTATDLGAGASRGHYAQMVIREMALIRQWQCDHGIEEPAAS 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++   ++  ++D I   W ++ + EIT EANP +V+          G  R
Sbjct: 65  TVFFGGGTPTVLAAADLVAVVDAIRAIWGLTPDAEITTEANPDTVDEAYIAELADGGFTR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L  L R H  S   A +  A     R S DLIY  P +++  W   ++
Sbjct: 125 ISFGMQSAVPHVLATLDRTHTPSNVAAGVDAATMAGLRSSVDLIYGAPGESLEDWRTSVE 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V H+S Y LT+E  T   +    G L  P ++     Y L   + +  GL  YE
Sbjct: 185 AALDLGVHHISAYALTVEPTTKMGRRIAAGTLPKPDDDDEAAKYELADELFTQAGLDWYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------GSHRVAISIEKHPESWLK 306
           ISN +  G ES HNL YWR  D+ G+GPGAHS  +       G    +  I  HP  W  
Sbjct: 245 ISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYRCHAMSSNGYGLRSWDI-AHPRLWGV 303

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            + ++     + E +++E+  +E +M+GLR+REG+ ++  +    R + ++    +  +G
Sbjct: 304 AINEHRVPWADSERITAEENLEELIMLGLRMREGLDLERID----RVIAVDRLTPMIEEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +  V   R+  T+RG  + D+VI
Sbjct: 360 LVTVVDGRRVVPTRRGRLINDTVI 383


>gi|227518567|ref|ZP_03948616.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX0104]
 gi|227553094|ref|ZP_03983143.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis HH22]
 gi|255976024|ref|ZP_05426610.1| coproporphyrinogen III oxidase [Enterococcus faecalis T2]
 gi|256958791|ref|ZP_05562962.1| coproporphyrinogen III oxidase [Enterococcus faecalis DS5]
 gi|257078822|ref|ZP_05573183.1| coproporphyrinogen III oxidase [Enterococcus faecalis JH1]
 gi|257419124|ref|ZP_05596118.1| coproporphyrinogen III oxidase [Enterococcus faecalis T11]
 gi|307271214|ref|ZP_07552497.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4248]
 gi|307279122|ref|ZP_07560180.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0860]
 gi|307291287|ref|ZP_07571171.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0411]
 gi|312899410|ref|ZP_07758741.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0470]
 gi|227073986|gb|EEI11949.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX0104]
 gi|227177780|gb|EEI58752.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis HH22]
 gi|255968896|gb|EET99518.1| coproporphyrinogen III oxidase [Enterococcus faecalis T2]
 gi|256949287|gb|EEU65919.1| coproporphyrinogen III oxidase [Enterococcus faecalis DS5]
 gi|256986852|gb|EEU74154.1| coproporphyrinogen III oxidase [Enterococcus faecalis JH1]
 gi|257160952|gb|EEU90912.1| coproporphyrinogen III oxidase [Enterococcus faecalis T11]
 gi|306497518|gb|EFM67051.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0411]
 gi|306504247|gb|EFM73459.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0860]
 gi|306512712|gb|EFM81361.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4248]
 gi|311293454|gb|EFQ72010.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0470]
 gi|315030964|gb|EFT42896.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4000]
 gi|315033700|gb|EFT45632.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0017]
 gi|315036785|gb|EFT48717.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0027]
 gi|315575638|gb|EFU87829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0309B]
 gi|315579919|gb|EFU92110.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0309A]
          Length = 382

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|257082735|ref|ZP_05577096.1| coproporphyrinogen III oxidase [Enterococcus faecalis E1Sol]
 gi|256990765|gb|EEU78067.1| coproporphyrinogen III oxidase [Enterococcus faecalis E1Sol]
          Length = 382

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGKTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|332184735|gb|AEE26989.1| Radical SAM family enzyme, putative coproporphyrinogen III oxidase,
           oxygen-independent [Francisella cf. novicida 3523]
          Length = 380

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 176/331 (53%), Gaps = 8/331 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      + + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSQQYYQKLIADFDTHLDDLQDREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  IAKN  +S+N EIT+E NP +VE      Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKLLQHIAKNAKISANCEITLEMNPGTVERGTILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKPPK----LPDEEILESIEIAGKQALAQAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDY+GIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYVGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           +   +S ++   EF++  LRL+ G  + ++E
Sbjct: 302 DSNIVSQDEVIYEFMLNALRLKNGFKLSEFE 332


>gi|256962102|ref|ZP_05566273.1| coproporphyrinogen III oxidase [Enterococcus faecalis Merz96]
 gi|293383126|ref|ZP_06629043.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis R712]
 gi|293387721|ref|ZP_06632266.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis S613]
 gi|312907286|ref|ZP_07766277.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 512]
 gi|312909904|ref|ZP_07768752.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 516]
 gi|256952598|gb|EEU69230.1| coproporphyrinogen III oxidase [Enterococcus faecalis Merz96]
 gi|291079465|gb|EFE16829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis R712]
 gi|291082910|gb|EFE19873.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis S613]
 gi|310626314|gb|EFQ09597.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 512]
 gi|311289862|gb|EFQ68418.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 516]
          Length = 382

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENHLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|255972986|ref|ZP_05423572.1| coproporphyrinogen III oxidase [Enterococcus faecalis T1]
 gi|256762300|ref|ZP_05502880.1| coproporphyrinogen III oxidase [Enterococcus faecalis T3]
 gi|256965300|ref|ZP_05569471.1| coproporphyrinogen III oxidase [Enterococcus faecalis HIP11704]
 gi|257086650|ref|ZP_05581011.1| coproporphyrinogen III oxidase [Enterococcus faecalis D6]
 gi|257415922|ref|ZP_05592916.1| coproporphyrinogen III oxidase [Enterococcus faecalis AR01/DG]
 gi|257422809|ref|ZP_05599799.1| coproporphyrinogen III oxidase [Enterococcus faecalis X98]
 gi|307273405|ref|ZP_07554650.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0855]
 gi|255964004|gb|EET96480.1| coproporphyrinogen III oxidase [Enterococcus faecalis T1]
 gi|256683551|gb|EEU23246.1| coproporphyrinogen III oxidase [Enterococcus faecalis T3]
 gi|256955796|gb|EEU72428.1| coproporphyrinogen III oxidase [Enterococcus faecalis HIP11704]
 gi|256994680|gb|EEU81982.1| coproporphyrinogen III oxidase [Enterococcus faecalis D6]
 gi|257157750|gb|EEU87710.1| coproporphyrinogen III oxidase [Enterococcus faecalis ARO1/DG]
 gi|257164633|gb|EEU94593.1| coproporphyrinogen III oxidase [Enterococcus faecalis X98]
 gi|306509932|gb|EFM78957.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0855]
 gi|315027456|gb|EFT39388.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2137]
 gi|315150712|gb|EFT94728.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0012]
 gi|315153265|gb|EFT97281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0031]
 gi|315155957|gb|EFT99973.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0043]
 gi|315157875|gb|EFU01892.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0312]
          Length = 382

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|317125272|ref|YP_004099384.1| coproporphyrinogen III oxidase anaerobic [Intrasporangium calvum
           DSM 43043]
 gi|315589360|gb|ADU48657.1| coproporphyrinogen III oxidase, anaerobic [Intrasporangium calvum
           DSM 43043]
          Length = 414

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 199/400 (49%), Gaps = 24/400 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---------RRYKVGQENFIQSFLTEM 59
           + + G  +  LG+YVH PFC  +C YCDFN++              +G + +  + L E+
Sbjct: 21  SALAGLATTDLGIYVHVPFCSVRCGYCDFNTYTLTELGPRDGSAAAIGLDTYADAALAEL 80

Query: 60  QWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
              R++ G  +  +S++F GGGTP+++   ++  +L GI + + ++   E+T EANP SV
Sbjct: 81  DLARRVLGDAALPVSTVFVGGGTPTMLRSADLVRVLSGIRERFGLTPGAEVTTEANPDSV 140

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
              +       G  R+SLG+QS     L  L R H+      A+   R +  ++S DLIY
Sbjct: 141 TPESLAELAVGGFTRVSLGMQSAVPHVLATLERTHDPDNVARAVEAVRAVGMQVSLDLIY 200

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +++  W   L+ A++   DH+S Y L +E GT      + G + +P ++   D Y 
Sbjct: 201 GTPGESLADWRRSLEAAVAMGPDHVSAYALVVEDGTKLAGQVRRGQVPMPEDDDEADKYE 260

Query: 238 LTQSITSAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           L   + +  G   YE+SN +   GA   HNL YW   ++ G+GPGAHS V      V   
Sbjct: 261 LADELLTRAGYQWYEVSNWARSDGARCRHNLAYWSGANWWGVGPGAHSHVG----GVRWW 316

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +   G   + +E LS +Q+ DE +++G R+ +G+ +   ++L G     
Sbjct: 317 NAKHPAAYAARLVAGGSPALAREILSGDQRYDETVLLGTRIVDGLPL---DVLRGSGR-- 371

Query: 357 ECERNLQRQGFIE---RVQFSRLRCTQRGMTMLDSVIANL 393
                L   G ++    V   R+  T+RG  + D+V+  L
Sbjct: 372 AAVAGLIADGLVDGPAAVGDGRVVLTRRGRLLADTVVHRL 411


>gi|315174393|gb|EFU18410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1346]
          Length = 382

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/330 (35%), Positives = 179/330 (54%), Gaps = 10/330 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E L+   Q +E L +GLR + GIS + ++
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQ 328


>gi|126666573|ref|ZP_01737551.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
 gi|126628961|gb|EAZ99580.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
          Length = 383

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 204/376 (54%), Gaps = 12/376 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH     + +  ++++ L ++    +L   R I ++F G
Sbjct: 13  ALSLYLHVPWCVRKCPYCDFNSHAITGDIPESVYLKALLDDLDQDLRLAAGRVIQTVFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+     + +   +      +++ EIT+EANP ++E   F+ +R+AG+NR+S+GV
Sbjct: 73  GGTPSLMSGGFYSDLFRQLKTRLEFAADAEITLEANPGTLEQGRFEAFREAGINRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR H++  A  AI  AR   F   + DL++ LP QT  Q   +L +ALS
Sbjct: 133 QSFNPEQLKVLGRIHDSQAAHNAITAARQAGFDNFNIDLMHGLPGQTPEQALDDLAQALS 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y   HLS YQLT+E  T FY    +    LP ++   D+Y+       +HG   YE+S  
Sbjct: 193 YQPPHLSWYQLTVEPNTEFYSQPPE----LPDDDRLWDIYSQGGDYLRSHGFTDYEVSAW 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           S     S HNLNYW +GDY+ +G G H ++     ++    + + P+++L  +   G   
Sbjct: 249 SQHNMASRHNLNYWTFGDYLALGAGGHGKISQPDGQILRYWKTRQPQAYLNRI---GSRT 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQFS 374
              E ++  ++  EFLM  LRL  G+    ++   G  L  I  +    RQ  +   Q  
Sbjct: 306 AGSEAIAVAERPLEFLMNALRLGAGVPENLFQQRTGLPLSTIAVQLEALRQEGLMHPQ-- 363

Query: 375 RLRCTQRGMTMLDSVI 390
           R++ T+ G   L+S++
Sbjct: 364 RIQATELGQRYLNSLL 379


>gi|206900946|ref|YP_002250831.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dictyoglomus thermophilum H-6-12]
 gi|206740049|gb|ACI19107.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dictyoglomus thermophilum H-6-12]
          Length = 377

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 208/386 (53%), Gaps = 21/386 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSI 74
           S  +G+Y+H PFCVKKCPYCDF S    Y   +E  +++  L E+      +    + +I
Sbjct: 4   SKPIGIYLHIPFCVKKCPYCDFVSF--SYSEDEEGRYVEYLLKEIDMK---SNNELVDTI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS++   ++  ILD I K + +S +VEI++E NP +V     + +++  VNRIS
Sbjct: 59  YLGGGTPSILSLCSLEKILDFIYKRFEISKDVEISMEVNPGTVNKEKVRAWKELSVNRIS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS  E+ L+ LGR HN  +     ++ R   F  ++ D+IYALP Q    +   L+ 
Sbjct: 119 IGAQSFLEKELKLLGRIHNVKDIYTTFNILREAGFDNINIDIIYALPFQRKEDFCFSLKE 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    +H+S+Y L IE+ T FY+M+   ++ LP  ++  ++++        +G   YEI
Sbjct: 179 TLKLEPEHISIYNLIIEEDTPFYEMYLKSEIELPENDLEAEMFSFAMDFLKGNGFIHYEI 238

Query: 254 SNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESWLKMVR 309
           SN S   G +  HNL YW    Y G G  A+S    ++ G+H       KH   + + ++
Sbjct: 239 SNFSKGEGYKCRHNLKYWYQEKYYGFGVSAYSYDPPMRYGNH-------KHLYVYYEKIK 291

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN--LQRQGF 367
           +    + EKEFL  E  A ++L + LRL EG++ +++E   G+ ++   +       +G 
Sbjct: 292 EGKLPIEEKEFLIGEDLAKDYLFLRLRLLEGVAREEFESRFGKKIEYFMKNYPIFVEEGL 351

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           I+  +  R+  T++G+ + + +  ++
Sbjct: 352 IKE-ENGRIFLTEKGVLLANEIFQDI 376


>gi|307288258|ref|ZP_07568256.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0109]
 gi|306500774|gb|EFM70094.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0109]
 gi|315164176|gb|EFU08193.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1302]
          Length = 382

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/330 (35%), Positives = 179/330 (54%), Gaps = 10/330 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMDKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E L+   Q +E L +GLR + GIS + ++
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQ 328


>gi|300780712|ref|ZP_07090566.1| coproporphyrinogen III oxidase [Corynebacterium genitalium ATCC
           33030]
 gi|300532419|gb|EFK53480.1| coproporphyrinogen III oxidase [Corynebacterium genitalium ATCC
           33030]
          Length = 410

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/331 (35%), Positives = 169/331 (51%), Gaps = 11/331 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQW---MRQLTGPRSI 71
           S+  GVYVH PFC  +C YCDFN++     +     ++ +   E++       LTG   +
Sbjct: 37  SSGFGVYVHVPFCATRCGYCDFNTYTPSETETSYAAYLDALERELEMGAASTDLTG--GV 94

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSL+    +  ILD I + + +  + E+T E+NP S     F+G ++AG  
Sbjct: 95  DTVFIGGGTPSLLGADGLGRILDTIKRTFGLKPDAEVTTESNPESTSPEYFEGLKRAGFT 154

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS     L+ L R H    A+AA   A R  F  ++ DLIY  P +T    +  
Sbjct: 155 RVSLGMQSASTPVLKILDRQHTPGRAVAAAKEAQRAGFEHVNLDLIYGTPTETEDDVKKS 214

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L   +DH+S Y L +E GT   +    G L  P E+   D Y L  S     G   
Sbjct: 215 LDHVLDAGMDHVSAYSLIVEDGTAMARKINKGQLPAPDEDTYADRYELIASTLEEAGFGW 274

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G E  HNL YWR G++ G GPGAH  V     R      K PE++ + +  
Sbjct: 275 YEVSNWAKPGGECQHNLIYWRGGNWWGAGPGAHGYVG----RTRFMNVKRPETYNQKLAT 330

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
               +  +E ++  +   E +M+GLRL+EGI
Sbjct: 331 GQLPIASEETITDAEHHFEQIMLGLRLKEGI 361


>gi|322376217|ref|ZP_08050710.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. M334]
 gi|321282024|gb|EFX59031.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. M334]
          Length = 376

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 212/376 (56%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E +        + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + ++L+G+ KN  +S+  E+TIEANP  ++ +     + + VNR+SLGVQ+
Sbjct: 62  TPTALSAPQLEVLLNGLTKNLDLSALEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+ 
Sbjct: 122 FDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKDNVAKAIG 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A +
Sbjct: 240 SKSGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNARI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E LS ++Q +E + +GLR + G+S+  +E   GR  D    E  R+L +QG ++ ++ 
Sbjct: 295 TEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRTFDGLYGEIVRDLVQQGLMQ-IEG 353

Query: 374 SRLRCTQRGMTMLDSV 389
            R+R T+RG+ + D+V
Sbjct: 354 DRVRMTKRGLFLGDTV 369


>gi|326333955|ref|ZP_08200185.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nocardioidaceae bacterium Broad-1]
 gi|325948234|gb|EGD40344.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nocardioidaceae bacterium Broad-1]
          Length = 403

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/340 (32%), Positives = 184/340 (54%), Gaps = 11/340 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQL 65
           ++++  G   LG YVH PFC  +C YCDFN++        V ++ +      E++  R++
Sbjct: 20  DSLSTLGEKGLGFYVHVPFCTVRCGYCDFNTYTAVELGEGVSRQTYADQATEEVRLARRV 79

Query: 66  TGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            G R   + ++FFGGGTP+L+  +++  IL  I   + ++ +VE+T EANP SV+++  +
Sbjct: 80  LGERDKHVDTVFFGGGTPTLLPAKDLTGILRAIKDEFGLADDVEVTTEANPDSVDLDYLR 139

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G  R+S G+QS     L  L R H+       +  AR   F ++S DLIY  P +
Sbjct: 140 ALREGGFTRLSFGMQSAVPHVLHTLDRTHDPERVPLVVEWAREAGFEQVSLDLIYGTPGE 199

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++  W   L  AL+   DH+S Y L +E GT   +  + G+L +P E+   D Y L  + 
Sbjct: 200 SIDDWRTSLDTALASNPDHISAYSLIVEDGTALARRVRRGELEMPDEDDLADKYELADAT 259

Query: 243 TSAHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
              HGL  YE+SN +   ++   HN+ YW+ GD+ G+GPGAHS V  G+    +   KHP
Sbjct: 260 LRKHGLTWYEVSNWATEESQRCRHNMLYWQGGDWWGVGPGAHSHVG-GTRWWNV---KHP 315

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           +++   +         +E L+ E +  E +++ LRL +G+
Sbjct: 316 KAYADRIGAKQSPAHAREVLAEEDRRVERVLLELRLADGL 355


>gi|168187878|ref|ZP_02622513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum C str. Eklund]
 gi|169294256|gb|EDS76389.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum C str. Eklund]
          Length = 375

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/332 (35%), Positives = 181/332 (54%), Gaps = 11/332 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N   +Y+H PFC +KC YCDF S+      G+EN +  +   +         + I++IF
Sbjct: 2   NNEASLYIHIPFCKQKCLYCDFTSYC-----GRENRMVDYSRALSKEIDQIKNKKINTIF 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  Q   ++   I K    S ++E T+E+NP + +    +  +  GVNRIS+
Sbjct: 57  IGGGTPTYLCLQGWNILKKSIDK-LEKSIDLEFTVESNPRTFDEEKLKFLKSIGVNRISI 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ +++ L+ LGR H   E + + H+AR I F  ++ DL++ +P QT+  W+  L   
Sbjct: 116 GLQAWQDKHLKSLGRIHTKDEFLKSYHMARQIGFKNINVDLMFGIPNQTLADWKETLLEV 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                +HLS Y L IE+GT FY  ++   + LPSE +   +Y+ T     + G   YEIS
Sbjct: 176 TKLNPEHLSCYSLIIEEGTPFYDFYEKNKIELPSEELERKMYDYTLKFLESKGYKQYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S    E  HNL YW   +YIG G  +HS V    +R    IEK+ +S    + KN   
Sbjct: 236 NFSKEKYECRHNLVYWNLNEYIGCGAASHSYVDGYRYRNEEDIEKYIDS----IEKNKSP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +VEK   S +   +EF+ MGLR  +GIS+K++
Sbjct: 292 IVEKIKTSLKSDIEEFIFMGLRKIKGISIKEF 323


>gi|315169986|gb|EFU14003.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1342]
          Length = 382

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 198/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A +    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAEDVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|311031612|ref|ZP_07709702.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13]
          Length = 379

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 199/379 (52%), Gaps = 20/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN  V       + +++    EM+        + + +IF GGGT
Sbjct: 5   AYIHIPFCEHICHYCDFNK-VFLKNQPVDAYLEFMDVEMKNTIDRFPTQHLETIFVGGGT 63

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + ++ +L+ I +N+ V  ++E T EANP  + +   +  ++ GVNR+S GVQS 
Sbjct: 64  PTALNQKQLSYLLESIQRNFDVVPDIEYTFEANPGDLSLEKLRLLKEGGVNRLSFGVQSF 123

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L+ +GR+H  ++   +I  AR   F  +S DLIY+LP QT+  ++  L  A S  +
Sbjct: 124 NDDLLKRIGRSHRKTDVFKSIEHAREAGFDNISVDLIYSLPDQTVEDFQDTLHTAFSLGL 183

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H S Y L IE  T+FY +   G L LP++     +Y++  +    HG H YEISN +  
Sbjct: 184 EHYSAYSLIIEPKTVFYNLMSKGKLPLPTQEEETSMYDVLLNEMEKHGYHQYEISNFAKE 243

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW    Y GIG GAHS  + G  R      K    ++  + + G    E+ 
Sbjct: 244 GYESKHNLTYWDNESYYGIGAGAHSYTE-GVRRANHGPLK---KYMDSISETGFPYKEEH 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--------CERNLQRQGFIERV 371
            ++ E++ +E + +GLR  +G+S+  +E    R  D E         E N+Q+ G +E+ 
Sbjct: 300 VVTREERIEEEMFLGLRKTQGVSITRFE----RKFDAEMLNILKGPIEENIQK-GLLEQ- 353

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           Q   +R T++G  + + V 
Sbjct: 354 QGDFIRLTKKGKFLGNEVF 372


>gi|294629289|ref|ZP_06707849.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           e14]
 gi|292832622|gb|EFF90971.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           e14]
          Length = 413

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 195/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 25  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLADEVRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP +V+   
Sbjct: 85  KVLGDDPREVRTVFVGGGTPTLLAAADLVRMLHAIRDEFGLAPDAEITTEANPETVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NRIS G+QS     LR L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LAALREGGFNRISFGMQSARPHVLRILDRTHTPGRPEACVAEARAAGFEHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 205 GESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 264

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + S  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EVLSGAGFEWYEVSNWATSAAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E LS E +  E +++ LRLREG  +    +L  R   +   
Sbjct: 321 HPGAYAGALAEGRSPGAGREVLSGEDRRVERILLELRLREGAPLS---LL--REEGLAAA 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R    +G +E   +   R   T RG  + D+V+ +L
Sbjct: 376 RRALSEGLLEAGPYEAGRAVLTLRGRLLADAVVRDL 411


>gi|134098063|ref|YP_001103724.1| coproporphyrinogen III oxidase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910686|emb|CAM00799.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 409

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 197/399 (49%), Gaps = 25/399 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           + + G GS   GVYVH PFC  +C YCDFN++    ++G      S+L  ++    L G 
Sbjct: 20  SALAGLGSRPFGVYVHVPFCATRCGYCDFNTYTAD-ELGSSAGFGSWLEGLRAELDL-GA 77

Query: 69  RSIS----------SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           R ++          ++F GGGTPSL+  + +  +LD +  ++ ++   E+T E+NP S  
Sbjct: 78  RVLAAGGEPVPAAGTVFAGGGTPSLLGAERLGEVLDAVRSSFGLADGAEVTTESNPESTS 137

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
              F+G   AG  R+SLG+QS  +  LR L R H    A+ A   AR   F  ++ DLIY
Sbjct: 138 PEFFEGIAAAGYTRVSLGMQSAAQHVLRVLERRHTPGRAVEAAREARAAGFGHVNLDLIY 197

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T       L   L   VDH+S Y L +E GT   +  + GDL +P E+V  D Y 
Sbjct: 198 GTPGETDDDLRASLDAVLEAGVDHVSAYSLIVEDGTAMARKVRRGDLPMPDEDVLADRYE 257

Query: 238 LTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           L   +    GLH YE+SN +    A  +HN+ YWR GD+ G GPGAHS V      V   
Sbjct: 258 LLDGVLGGAGLHWYEVSNWARDDAARCMHNIGYWRGGDWWGAGPGAHSHVG----GVRWW 313

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP  +  ++ +     + +E L +E Q  E +M+ LRL  G+ +   +  AGR    
Sbjct: 314 NVKHPARYSALLAEGASPALAREVLDAEDQRIERVMLELRLASGLPLAVLDE-AGRLAAK 372

Query: 357 ECERNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           E   +    G +     +  RC  T RG  + D VI  L
Sbjct: 373 EAVAD----GLLRADALAADRCVLTDRGRLLADGVIQRL 407


>gi|227548786|ref|ZP_03978835.1| coproporphyrinogen dehydrogenase [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227079116|gb|EEI17079.1| coproporphyrinogen dehydrogenase [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 367

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 195/378 (51%), Gaps = 19/378 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            G+Y+H PFC  +C YCDFN++     +   E ++++  TE+   +  T P    ++F G
Sbjct: 2   FGLYIHVPFCATRCGYCDFNTYTPTEVETSHETYLRALETELA--KADTSP--ADTVFIG 57

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  I++ +  +  +    E+T E+NP S     F+G  +AG  R+SLG+
Sbjct: 58  GGTPSLLGAAGLGRIMEMVHTHVGLKPGAEVTTESNPESTSPEYFEGLLEAGFTRVSLGM 117

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ L R H    A+AA+  A +  F  ++ D+IY  P +T       L   LS
Sbjct: 118 QSASTPVLKVLDRMHTPGRAVAAVKEALDAGFEHVNLDMIYGTPTETDDDVRATLDAVLS 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VDH+S Y L +E GT   +  + G+L  PSE+V  D Y +  S     G   YE+SN 
Sbjct: 178 TGVDHVSAYSLIVEDGTAMARKVRRGELPAPSEDVYADRYEIISSTLEDAGFGWYEVSNW 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +  HNL YWR G + G GPGAHS   +GS R      K PE + +++      + 
Sbjct: 238 AREGGQCRHNLLYWRGGQWWGAGPGAHSF--IGSTR--FHNVKRPERYSELLAGGSLPIA 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECERNLQRQGFIERVQFSR 375
           ++E L++++Q  E +M+GLRL+EGI  ++W +  A   +D      L   G        R
Sbjct: 294 DQESLTAQEQHFEAIMLGLRLKEGIP-REWIDESAWGVVDKHARAGLLSVG-------ER 345

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T  G  + D +I ++
Sbjct: 346 VAVTDAGRLLADGIITDI 363


>gi|323141064|ref|ZP_08075969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414440|gb|EFY05254.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Phascolarctobacterium sp. YIT 12067]
          Length = 400

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/374 (34%), Positives = 191/374 (51%), Gaps = 12/374 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGG 78
            +Y+H PFCV+KC YCDF S+    +  + ++  +   E+     +     + +SI+FGG
Sbjct: 16  ALYLHIPFCVQKCLYCDFASYAGFGEQAKRDYTDAVCKEIALRAAEAANMAANASIYFGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + IA +++ + +        E TIE NP + ++   Q  R  G +RIS GVQ
Sbjct: 76  GTPSVLPTECIAKLVNALKQYGFWQQPCEATIEVNPGTADLAKLQTLRSLGFDRISFGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++  LR +GR HNA +A+ A+ LAR   F R+S DLIY LP QT+T  +  L+R    
Sbjct: 136 SLQDDELRAIGRIHNAQQALEALALARKAGFARISADLIYGLPSQTLTSLQDTLERLADT 195

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S+Y L +E GT    +   G + LP ++ A D+Y L QS     G   YEISN++
Sbjct: 196 GIEHISVYGLIVEDGTPLASLVDKGRITLPDDDTAADMYELVQSFLRERGFERYEISNYA 255

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGA----HSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
             G  S HN  YW Y  Y+  G  A      R + G   V   I +        +R +  
Sbjct: 256 KNGQYSRHNTVYWEYHPYMAFGAAACGFDGQRRRTGLSTVKEYIGQLQSFGGDDLRASAL 315

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIE 369
             VEK  LS  +  +EF+ MGLR  EG S+ +     G    +    E     +++    
Sbjct: 316 YNVEK--LSCAELLEEFMFMGLRRSEGASLAEARERFGVDVLQRFASELAPLFEQKLIAY 373

Query: 370 RVQFSRLRCTQRGM 383
                RLR T+RGM
Sbjct: 374 DASTQRLRLTERGM 387


>gi|134301299|ref|YP_001121267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|134049076|gb|ABO46147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. tularensis WY96-3418]
          Length = 380

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCKNVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKRPK----LPDEEILESIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|306824955|ref|ZP_07458298.1| coproporphyrinogen dehydrogenase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432782|gb|EFM35755.1| coproporphyrinogen dehydrogenase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 376

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 212/376 (56%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E +        + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     +++ VNR+SLGVQ+
Sbjct: 62  TPTALSASQLEVLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKQSPVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+S
Sbjct: 122 FDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMAQVKDNVAKAIS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G A +
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI-RH---YLSAV-EAGDARI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E LS ++Q +E + +GLR + G+S+  +E   GR+ +    E  R+L +QG ++ +  
Sbjct: 295 TEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFEGLYGEIIRDLVQQGLMQ-IDG 353

Query: 374 SRLRCTQRGMTMLDSV 389
            R+R T+RG+ + D+V
Sbjct: 354 DRVRMTKRGLFLGDTV 369


>gi|89257040|ref|YP_514402.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica LVS]
 gi|115315393|ref|YP_764116.1| coproporphyrinogen oxidase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|167009425|ref|ZP_02274356.1| coproporphyrinogen oxidase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|169656754|ref|YP_001429312.2| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|254368282|ref|ZP_04984301.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica 257]
 gi|254369877|ref|ZP_04985886.1| hypothetical protein FTAG_01637 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290953678|ref|ZP_06558299.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295312995|ref|ZP_06803704.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica URFT1]
 gi|89144871|emb|CAJ80214.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica LVS]
 gi|115130292|gb|ABI83479.1| coproporphyrinogen oxidase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254091|gb|EBA53185.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica 257]
 gi|157122847|gb|EDO66964.1| hypothetical protein FTAG_01637 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551822|gb|ABU62357.2| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica FTNF002-00]
          Length = 380

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKRPK----LPDEEILESIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|187931038|ref|YP_001891022.1| coproporphyrinogen III oxidase, anaerobic [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187711947|gb|ACD30244.1| coproporphyrinogen III oxidase, anaerobic [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 380

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLNDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKRPK----LPDEEILKSIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|293365721|ref|ZP_06612430.1| coproporphyrinogen dehydrogenase [Streptococcus oralis ATCC 35037]
 gi|307703664|ref|ZP_07640606.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus oralis ATCC 35037]
 gi|291316089|gb|EFE56533.1| coproporphyrinogen dehydrogenase [Streptococcus oralis ATCC 35037]
 gi|307623071|gb|EFO02066.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus oralis ATCC 35037]
          Length = 376

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 209/376 (55%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E          + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFHSY----DIQKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + L+LDG+ KN   S   E+TIEANP  ++ +     +++ VNR+SLGVQ+
Sbjct: 62  TPTALSAPQLELLLDGLTKNLDSSVLEELTIEANPGDLDADKIAVLKQSPVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            + + L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+S
Sbjct: 122 FDNKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMAQVKDNVAKAIS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    S     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIISELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G A +
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLNAV-EAGDARI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E L+ ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG ++ +  
Sbjct: 295 TEENLTQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLMQ-IDG 353

Query: 374 SRLRCTQRGMTMLDSV 389
            R+R T+RG+ + D+V
Sbjct: 354 DRVRMTKRGLFLGDTV 369


>gi|295112842|emb|CBL31479.1| coproporphyrinogen III oxidase, anaerobic [Enterococcus sp. 7L76]
          Length = 394

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E++  + L   + + +I+ GG
Sbjct: 18  AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIRLTQALYPEQEMKTIYIGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 75  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 134

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 135 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 194

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 195 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 255 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 310

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 311 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 370

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 371 --LRLTKKGLFVGNNVF 385


>gi|257085436|ref|ZP_05579797.1| coproporphyrinogen III oxidase [Enterococcus faecalis Fly1]
 gi|256993466|gb|EEU80768.1| coproporphyrinogen III oxidase [Enterococcus faecalis Fly1]
          Length = 382

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/377 (32%), Positives = 198/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQKMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q     GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMNNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|306829774|ref|ZP_07462963.1| coproporphyrinogen dehydrogenase [Streptococcus mitis ATCC 6249]
 gi|304428125|gb|EFM31216.1| coproporphyrinogen dehydrogenase [Streptococcus mitis ATCC 6249]
          Length = 376

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/375 (34%), Positives = 210/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +        + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+S 
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMAQVKDNVAKAISL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIITELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLNAV-EAGNARIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    E  R L +QG ++ +   
Sbjct: 296 EEHLSQTEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRELVQQGLMQ-IDGD 354

Query: 375 RLRCTQRGMTMLDSV 389
           R+R T+RG+ + D+V
Sbjct: 355 RVRMTKRGLFLGDTV 369


>gi|331266093|ref|YP_004325723.1| coproporphyrinogen III oxidase,oxygen-independent
           coproporphyrinogen III oxidase,putative [Streptococcus
           oralis Uo5]
 gi|326682765|emb|CBZ00382.1| coproporphyrinogen III oxidase,oxygen-independent
           coproporphyrinogen III oxidase,putative [Streptococcus
           oralis Uo5]
          Length = 376

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 213/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +        + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++V+     +++ VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDVDKIAVLKQSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+S 
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMAQVKDNVAKAISL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIITELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLNAV-EAGNARIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
           +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    +  R+L +QG ++ +   
Sbjct: 296 EEHLSQREQMEEEMFLGLRKKSGVSMARFEEKFGRSFDELYGKIIRDLVQQGLMQ-IDGD 354

Query: 375 RLRCTQRGMTMLDSV 389
           R+R T+RG+ + D+V
Sbjct: 355 RVRMTKRGLFLGDTV 369


>gi|94987259|ref|YP_595192.1| coproporphyrinogen III oxidase-like protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731508|emb|CAJ54871.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 397

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 215/389 (55%), Gaps = 25/389 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRSISSI 74
           +Y+H PFC  +C YC F S  +    +  +  +Q++   ++     W  +L  P +I +I
Sbjct: 3   LYIHIPFCKTRCYYCSFFSKPLDTSSIDGQQKLQTYFVTLKNELSYWGNKLQKP-TIETI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRI 133
           FFGGGTPSL+ PQ I  IL+ I++ + ++S +EIT+EANP S+  ++  + Y  AG+NR+
Sbjct: 62  FFGGGTPSLLSPQYIYKILEHISQYYRLTSKIEITLEANPESLTTLSLIKEYLMAGINRV 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG Q++  + L  LGR HN  +AI + ++ R+ +   ++ DLI+ LP QT+ +W   ++
Sbjct: 122 SLGFQAINNKQLHHLGRTHNIIDAIQSYNMLRDALCTNINIDLIWGLPNQTVQKWLTTIK 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  +H+S Y LT+E GT+F K + +  L LPSE   + ++  T++     GL  YE
Sbjct: 182 YVAELKPNHISSYNLTLEPGTIFNKQYVNKKLTLPSEEEQITMFFQTKTYLEEKGLLQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMVRK 310
           ISN +  G +  HN  YW   DY+G+GP A S +     ++   +S+      W  +V K
Sbjct: 242 ISNFAQPGYQCKHNNGYWEGKDYLGVGPSATSTLNHYRWTNPADLSL------WSLLVEK 295

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQG 366
                  KE++ ++ Q  E  M+ LR  +G+++ ++  +A  N  I+  +N    L+++ 
Sbjct: 296 KKEP--PKEYIDNKTQVLELFMLRLRTTKGLNINEYNTIAKNNF-IDSYKNLIFKLEKEQ 352

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            I ++  + L+ T  G  + +S+I    V
Sbjct: 353 LI-KIDSNYLKLTPLGQLVSNSIIKEFFV 380


>gi|121534797|ref|ZP_01666617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosinus carboxydivorans Nor1]
 gi|121306592|gb|EAX47514.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosinus carboxydivorans Nor1]
          Length = 380

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 194/387 (50%), Gaps = 26/387 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFC +KC YCDF SH     + Q ++I +   E+    +      + +++ GG
Sbjct: 3   LGLYIHIPFCRQKCLYCDFPSHDNLAHLYQ-DYIDALCREIAEQGRRFAGWVVDTVYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++  + +  +   +A  +++   VEIT+EANP ++++   +  R  GVNR+S GVQ
Sbjct: 62  GTPTVLPSELLGRVFASLAAAFSLEPAVEITVEANPGTIDLPLLKALRAWGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +     L  LGR H A + I A+ LAR   F  ++ DL+Y LP+Q        L RA   
Sbjct: 122 TFVPHLLPLLGRVHTAEQGIEAVELARAAGFDNINLDLMYGLPEQRQADVADSLSRATEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS+Y L +E+GT F   H  G L LP E     +Y+L  +     G   YEISN+ 
Sbjct: 182 GVPHLSVYGLKVEEGTPFAVSHAAGKLALPDETEEEAMYDLVTAFLRQAGYRRYEISNYC 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE--SWLKMVRKNGHAV 315
             G E  HNL YW Y  ++G+G  A+S V        +     P+   +++  R+   AV
Sbjct: 242 LSGYECRHNLKYWHYQPFLGLGAAAYSFVD------GVRWANTPQVTEYIQAQRQGALAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGIS---------VKDWEMLAGRNLDIECERNLQRQG 366
            ++E L  + Q  EF+ + LR   G+          +  W+      +D      L ++G
Sbjct: 296 HDREVLDRQTQITEFIFLALRTAAGLDSGIFQERFGISFWDAYRA-TID-----TLSQRG 349

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +ER   +RLR T  GM   + V A+ 
Sbjct: 350 LVERCG-NRLRLTDLGMKFGNIVFASF 375


>gi|171743009|ref|ZP_02918816.1| hypothetical protein BIFDEN_02134 [Bifidobacterium dentium ATCC
           27678]
 gi|283455975|ref|YP_003360539.1| coproporphyrinogen III oxidase [Bifidobacterium dentium Bd1]
 gi|171278623|gb|EDT46284.1| hypothetical protein BIFDEN_02134 [Bifidobacterium dentium ATCC
           27678]
 gi|283102609|gb|ADB09715.1| Coproporphyrinogen III oxidase [Bifidobacterium dentium Bd1]
          Length = 402

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 189/399 (47%), Gaps = 31/399 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VY+H PFC+++C YCDFN++          + N+    + EM  +R       I      
Sbjct: 4   VYIHVPFCMRRCGYCDFNTYTAIDMGAGASRGNYANMVIREMAIVRDWQERHGIVEPPAG 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++++  ++  +LD + + W ++ N EIT EANP +V  +  +     G NR
Sbjct: 64  TVFFGGGTPTILKAADLVAMLDAVRETWGIADNAEITTEANPDTVNADYVRELADGGFNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H      A I  A     R S DLIY  P +++  W   + 
Sbjct: 124 ISFGMQSAVPHVLKTLDRTHTPENVEAGISAANAAGMRSSVDLIYGAPGESLDDWRTSVN 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V+H+S Y LT+   T   +    G L  P ++     Y +  ++ SA GL  YE
Sbjct: 184 TALDLGVNHISAYALTVAPNTTMGRRIAAGMLPTPDDDDEAAKYEIADALLSAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS--------------RVKVGSHRVAISIE 298
           ISN +  G ES HNL YWR  D+ G+GPGAHS              R +      A ++ 
Sbjct: 244 ISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYDAPALFERGTARRGQADGEDSATALR 303

Query: 299 K----HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                HP  W   + +        E ++ E+  +E +M+GLR+R G+ +       G  +
Sbjct: 304 SWDIAHPRLWGSAISEGRIPWAGSENITVEENLEETIMLGLRIRGGLDIA----RLGNAI 359

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                R L+  G I  V+      T RG  + D++IA L
Sbjct: 360 AETTWRELEHDGLIT-VEHHHAIPTLRGRLLNDTIIAKL 397


>gi|308069970|ref|YP_003871575.1| Oxygen-independent coproporphyrinogen III oxidase 1
           (coproporphyrinogenase) [Paenibacillus polymyxa E681]
 gi|305859249|gb|ADM71037.1| Oxygen-independent coproporphyrinogen III oxidase 1
           (Coproporphyrinogenase) [Paenibacillus polymyxa E681]
          Length = 395

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 199/381 (52%), Gaps = 16/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  KC YCDFNS+V + +   E ++ +   EM+   +L  P  I +IF GGG
Sbjct: 16  AVYLHIPFCTNKCFYCDFNSYVLKDQPVME-YLYALEREMEHTVKLHPPGEIKTIFVGGG 74

Query: 80  TPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           TP+ + P+ +   L  +     NW  + ++E ++EANP + +       ++ GVNR+S G
Sbjct: 75  TPTTLNPKEMEYFLKSVRTYFPNW--AEDIEFSMEANPGTTDFEKLSVMKEGGVNRLSFG 132

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ + + L  +GR H+  +   ++  AR +    +S DL++ LP QT+      + RAL
Sbjct: 133 VQAFQNELLTGIGRIHSTDDVYRSLENARKVGLDNLSIDLMFGLPNQTVDMLHESVSRAL 192

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              + H S+Y L +E+ TLF+ +++   L LP E+  +++Y L        G   YEISN
Sbjct: 193 ELELPHYSIYSLKVEENTLFHTLYQKNQLPLPHEDDELEMYLLLMRRMKEAGYEQYEISN 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G  S HN+ YWR  DY G+G GAH  V    H     I  + E+      +NG   
Sbjct: 253 FAKPGFGSKHNMTYWRNEDYYGLGAGAHGYVGRERHMNIKGINPYVEA-----SRNGLPR 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQ 372
           ++   + + +  ++FLM+GLR+ EG+S   +E   G+ L+      L +    G IE ++
Sbjct: 308 LDSFEVPAAEAMEDFLMVGLRMLEGVSKSRFEAQFGQALEDTFTAPLGKMLNAGLIESIE 367

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
               R ++RG+   + V A  
Sbjct: 368 -DGYRLSERGILFGNDVFAEF 387


>gi|315145614|gb|EFT89630.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2141]
 gi|315160301|gb|EFU04318.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0645]
 gi|315166723|gb|EFU10740.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1341]
          Length = 382

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 199/377 (52%), Gaps = 16/377 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN   + +  GQ  + +IQS L E++  + L   + + +I+ GG
Sbjct: 6   AYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIRLTQALYPEQEMKTIYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ
Sbjct: 63  GTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+ 
Sbjct: 123 TFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN +
Sbjct: 183 DLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE
Sbjct: 243 LTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
            E L+   Q +E L +GLR + GIS + ++      ++       +R ++ +  IE    
Sbjct: 299 TEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI 358

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T++G+ + ++V 
Sbjct: 359 --LRLTKKGLFVGNNVF 373


>gi|298243929|ref|ZP_06967736.1| oxygen-independent coproporphyrinogen III oxidase [Ktedonobacter
           racemifer DSM 44963]
 gi|297556983|gb|EFH90847.1| oxygen-independent coproporphyrinogen III oxidase [Ktedonobacter
           racemifer DSM 44963]
          Length = 414

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/389 (34%), Positives = 199/389 (51%), Gaps = 27/389 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----RQLTG-PRSISSIF 75
           +Y+H PFC  +C YCDFN++     + +E ++++ L E++      R   G PR   +IF
Sbjct: 34  LYLHIPFCHTRCYYCDFNTYAGILPL-REPYVRALLHEIELAGLQARHPDGTPRRSRTIF 92

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+    I  +LD   + + + S  EIT+EANP ++      G R+AG+NR+S+
Sbjct: 93  FGGGTPSLLTVAQITRLLDTCRQAFALDSEAEITLEANPGTLSQEQLVGIREAGINRLSM 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G QS +   L+ LGR HN  E   A+  AR   F  ++ D ++ LP QTM  W   L RA
Sbjct: 153 GAQSYDAALLQKLGRIHNPDEITQAVQFARAAGFTSINLDFMFGLPDQTMQHWRETLDRA 212

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +H SLY L IE+GT F++   +  +    E++  D+Y        A G   YEIS
Sbjct: 213 LDLHPEHFSLYSLIIEEGTPFHQWVAEKRITPGDEDLCADMYEYADERLRAAGYINYEIS 272

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G  S HNL YW+   YIG+G GA S    G  R   + E+ P++++K ++ +   
Sbjct: 273 NWALPGHHSRHNLTYWQNLPYIGMGAGASS--FFGKKRY--TDERDPQAYIKRLKSDEIP 328

Query: 315 VVEKEF--LSSEQQADEFLMMGLRLREGISVKDWE--------MLAGRNLDIECERNLQR 364
           V+E E   +   Q   E   +GLR   G+ +  +E           G  L I     +  
Sbjct: 329 VIESESEEVDQAQAMSETAFLGLRTAMGLHLPTFERRFAQPFAQFVGDRLHI-----VDE 383

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G +E+V    LR +QRG  + + V   L
Sbjct: 384 AGLLEQVG-DWLRLSQRGRLLGNEVFLRL 411


>gi|310643082|ref|YP_003947840.1| oxygen-independent coproporphyrinogen iii oxidase [Paenibacillus
           polymyxa SC2]
 gi|309248032|gb|ADO57599.1| Oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           polymyxa SC2]
          Length = 395

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 198/381 (51%), Gaps = 16/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  KC YCDFNS+V + +   E ++ +   EM+   +L  P  I +IF GGG
Sbjct: 16  AVYLHIPFCTNKCFYCDFNSYVLKDQPVME-YLYALEREMEHTVKLHPPGEIKTIFVGGG 74

Query: 80  TPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           TP+ + P+ +   L  +     NW  + ++E ++EANP + +       ++ GVNR+S G
Sbjct: 75  TPTTLNPKEMEYFLRSVRTYFPNW--AEDIEFSMEANPGTTDFEKLSVMKEGGVNRLSFG 132

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ +   L  +GR H+  +   ++  AR      +S DL++ LP QT+   +  + RAL
Sbjct: 133 VQAFQNDLLTGIGRIHSTDDVYRSLENARKAGLDNLSIDLMFGLPNQTVDMLDESVSRAL 192

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              + H S+Y L +E+ TLF+ +++   L LP E+  +++Y L        G   YEISN
Sbjct: 193 ELDLPHYSIYSLKVEENTLFHTLYQKNQLPLPHEDDELEMYLLLMRRMKEAGYEQYEISN 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G  S HN+ YWR  DY G+G GAH  V    H     I  + E+      +NG   
Sbjct: 253 FAKPGLGSKHNMTYWRNEDYYGLGAGAHGYVGRERHMNIKGINPYVEA-----TRNGLPR 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQ 372
           ++   + + +  ++FLM+GLR+ EG+S   +E   G+ L+       R +   G IE ++
Sbjct: 308 LDSFEVPTAEAMEDFLMVGLRMLEGVSKSRFEAQFGQTLEDTFTVPLRKMLNAGLIESIE 367

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
               R ++RG+   + V A  
Sbjct: 368 -DGYRLSERGILFGNDVFAEF 387


>gi|295092111|emb|CBK78218.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium cf. saccharolyticum K10]
          Length = 462

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 204/373 (54%), Gaps = 41/373 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGP 68
           TG     L +Y+H PFC++KC YCDF S    +  G+E    +++    E++      G 
Sbjct: 20  TGSRPIPLELYIHIPFCIRKCAYCDFLS----FPAGEEERSLYVEQLAREIEEAGAAFGE 75

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               ++F GGGTPS++E   I  I+D + +++ +S   EIT+E NP +      + +R++
Sbjct: 76  YVAETVFIGGGTPSVLEGAQIGRIMDAVRESFHLSEEAEITMEVNPGTASPEKLRSWRRS 135

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+SLG+QS + + LR+LGR H A + + + H AR   F  ++ DL+ ALP QT   W
Sbjct: 136 GINRLSLGLQSAQNRELRYLGRIHTAEDFLESFHAAREAGFENINVDLMSALPGQTEEAW 195

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK------MHKDG------DL-VLPSENVAVD 234
           E  L++ LS   +H+S Y L IE+GT FY+      M + G      DL  LP E++   
Sbjct: 196 EDTLKKVLSLMPEHISAYSLIIEEGTPFYEKYGTEGMERKGKARARADLPPLPDEDMERS 255

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KV 288
           +Y  T+ I S  G H YEISN++  G E  HN  YW   +Y+G+G GA S +       +
Sbjct: 256 MYEATERILSEAGYHRYEISNYARPGFECRHNRGYWTGTEYLGLGLGASSYIIRNREADL 315

Query: 289 G-----SHRVAISIEKH----PE--SWLKMVRKN---GHAVVEKEFLSSEQQADEFLMMG 334
           G     +  +A+S  +     P+   +L   R++   G     ++ L+ + + +EF+ +G
Sbjct: 316 GGCPDEAGLLALSGAERFLNTPDMGKYLAYSREDFRAGRHTEGRDRLTWKDRMEEFMFLG 375

Query: 335 LRLREGISVKDWE 347
           LRL EG++ +++E
Sbjct: 376 LRLTEGVAEQEFE 388


>gi|167746556|ref|ZP_02418683.1| hypothetical protein ANACAC_01266 [Anaerostipes caccae DSM 14662]
 gi|167653516|gb|EDR97645.1| hypothetical protein ANACAC_01266 [Anaerostipes caccae DSM 14662]
          Length = 378

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/365 (34%), Positives = 201/365 (55%), Gaps = 23/365 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRS 70
           +  L +Y+H PFC +KC YCDF S    +  G +  I S++ +++     W R L  P S
Sbjct: 3   TRELELYLHIPFCKRKCSYCDFCS----FPAGDDE-ISSYIRKLRQEILHWGRLLKRP-S 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S++F GGGTPSLI    I  +++ +  +++ + N+E TIEANP +V       Y+  G+
Sbjct: 57  VSTVFIGGGTPSLIPGAQIESLMNTVRDSFSCTENMECTIEANPGTVTREKLSAYQNCGI 116

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+QS  E+ L+ LGR H   + ++  ++AR+  F  ++ DL+ A+P QTM   E 
Sbjct: 117 NRISFGLQSAREEELKILGRIHTFEDFVSGFYMARDCGFQNINVDLMNAVPLQTMETMEQ 176

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L R      +HLS+Y L IE+GT FY M K  D +LP+E+    +Y  T+ I    G  
Sbjct: 177 TLLRTAELEPEHLSVYSLIIEEGTPFYDM-KGLDDLLPTEDEDAAMYERTEKILHTLGYE 235

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN++  G E  HN  YW    Y+G G  A S  +         +EK    +L +  
Sbjct: 236 RYELSNYARPGYECRHNCGYWTGKPYLGFGLAASSYFRGKRFTNPADMEK----YLSITD 291

Query: 310 KNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDI--ECERNLQRQ 365
            +G  + EKE  L+ +++ +E++ +GLR+ +GIS  ++    G   LD+  E  + L  +
Sbjct: 292 FSG--IFEKETELTKKEEMEEYMFLGLRMTKGISKTEFSKRFGTGILDVYREPIQELSGK 349

Query: 366 GFIER 370
           G +E+
Sbjct: 350 GLLEQ 354


>gi|307701946|ref|ZP_07638955.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus mitis NCTC 12261]
 gi|307616761|gb|EFN95949.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus mitis NCTC 12261]
          Length = 376

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 209/376 (55%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E Q        + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFQSY----DIQKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + ++L G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+
Sbjct: 62  TPTALSASQLEVLLKGLTKNLDLSFLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+ 
Sbjct: 122 FDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIG 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A +
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLNAVEE-GNARI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R L +QG ++ +  
Sbjct: 295 TEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIVRELVQQGLMQ-IDG 353

Query: 374 SRLRCTQRGMTMLDSV 389
            R+R T+RG+ + D+V
Sbjct: 354 DRVRMTKRGLFLGDTV 369


>gi|332678923|gb|AEE88052.1| Radical SAM family enzyme, putative coproporphyrinogen III oxidase,
           oxygen-independent [Francisella cf. novicida Fx1]
          Length = 380

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKPPK----LPDEEILESIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|50955096|ref|YP_062384.1| coproporphyrinogen III oxidase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951578|gb|AAT89279.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 413

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 176/348 (50%), Gaps = 8/348 (2%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQL 65
           +N   G      GVY+H PFC  +C YCDFN++       V Q ++    + E+++  + 
Sbjct: 19  DNAGGGSADRDFGVYLHVPFCRVRCGYCDFNTYTATEVRGVSQTDYADHAVAEVRFAARA 78

Query: 66  TG-----PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            G      R +S++FFGGGTP+L+ P+ +  +L  + + W      E+T EANP SV+  
Sbjct: 79  LGRSGLPARPVSTVFFGGGTPTLLPPEALGRMLGAVREQWGFVPQAEVTTEANPDSVDAA 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +      AG  R+S G+QS   + L  L R H+       +  AR+   ++S DLIY  P
Sbjct: 139 DLLRLAAAGFTRVSFGMQSAVPRVLATLERTHDPERIPLVVQWARDAGLQVSLDLIYGTP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T+  WE  L  ALS   DHLS Y L +E GT   +    G L  P +++  D+Y    
Sbjct: 199 GETLGDWERSLDTALSCVPDHLSAYSLIVEPGTKLARQIAAGQLPEPDDDLQADMYERAD 258

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +  +  G   YE+SN +   G  S HNL YW   D+ GIGPGAHS +      V     K
Sbjct: 259 TRLAGAGYDWYEVSNWAKDDGHRSRHNLAYWLGHDWWGIGPGAHSHIGGDGGGVRWWNVK 318

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           HP ++ + V         +E L +E Q  E +++ +R+REGI+  + E
Sbjct: 319 HPAAYAQRVLAGQSPAAGRETLGAETQRVERVLLRMRIREGIASAELE 366


>gi|226324471|ref|ZP_03799989.1| hypothetical protein COPCOM_02252 [Coprococcus comes ATCC 27758]
 gi|225206919|gb|EEG89273.1| hypothetical protein COPCOM_02252 [Coprococcus comes ATCC 27758]
          Length = 393

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 218/393 (55%), Gaps = 25/393 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFCVKKC YCDF S     K  +E +++  + E++          + SIFFGG
Sbjct: 4   LELYIHIPFCVKKCAYCDFLSGPAGEK-EKEEYVKMLVDEIRNCPDTVQNYRVISIFFGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + I  ++D + + +T+  + EIT+E NP +V     + YR+AGVNR+S+G+Q
Sbjct: 63  GTPSLLTGEQIGRLMDTVREIFTLDEDAEITMEMNPGTVTEEKLRKYRQAGVNRLSIGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+ ++ LR LGR H   E + A HLAR N F  ++ DLI A+P QT+  W   L++ ++ 
Sbjct: 123 SVNDEELRLLGRIHTYEEFLEAYHLARANGFANINVDLISAIPGQTVESWRRTLEQVMAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMH-----KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +H+S Y L +E+GT FYK +     K+G   LP E+    +Y  T+++   +G H YE
Sbjct: 183 FPEHISAYSLILEEGTTFYKKYVEDEAKEGP-KLPDEDAERQMYWDTETLMEKNGYHRYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KVGSHRVAISIEKHPESWLK 306
           ISN++  G    HNL YW    Y+G G GA S V      K    +  +S   +P+    
Sbjct: 242 ISNYAKEGYACRHNLGYWERIPYLGFGIGAASLVPGDLIGKCRKLKGKMSRYTNPDQ--- 298

Query: 307 MVRKNGHAVVEK---EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECER-- 360
            +R+  H+   K   E L+  ++ +EF+ +GLR   GIS K++    G++L DI  E   
Sbjct: 299 -LREYAHSYRNKFQAELLTETEEMEEFMFLGLRKMNGISKKEFSEYFGKSLEDIYGEPIC 357

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L+    +E+    R+  T+RG+ + +SV    
Sbjct: 358 KLESLKLLEQDD-DRVWLTKRGIDVSNSVFVEF 389


>gi|110636590|ref|YP_676797.1| coproporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279271|gb|ABG57457.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 373

 Score =  209 bits (532), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 203/378 (53%), Gaps = 13/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H P+C K C YC+F  H        +  + S  TE+   +     R I +++FGGG
Sbjct: 3   GLYIHVPYCHKACHYCNF--HFSTSLKDMDKMVDSICTELLLRKDYLDQRLIETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++   N++ I   I  +++++S+ EIT+EANP  +   +   ++  GVNR+S+G+QS
Sbjct: 61  TPSILSSDNLSKIFHAIHDHYSIASSAEITLEANPEDITETSLLCWKSLGVNRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L ++ RNH++  +I  + LA +N F  +S DLIY LP  T  QW  E+Q A+S  
Sbjct: 121 FQNEYLHWMNRNHSSEASIKCVTLAQKNGFENISIDLIYGLPTLTADQWRAEIQTAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           V H+S Y LT+E+ T+F  + K G L  +P E     L  L   + +A G   YEISN  
Sbjct: 181 VPHISSYCLTVEEKTVFGNLAKKGALQPIPDEISEEHLIILIHELLAA-GYEQYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HN +YW+   YIGIGPGAHS     +HR   +   +   ++K + KN      
Sbjct: 240 KPAFESKHNSSYWQRKPYIGIGPGAHSY----NHRERAANISNNSLYIKQIEKN-EWTGS 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
            E LS   Q +E+++  LR + GI++ + E  +  +++  I+       +GF+  ++   
Sbjct: 295 IEILSDIDQYNEYILTRLRTKWGITLIEIEAFSLPDIEKTIKLLTQFVNEGFL-YIKDDI 353

Query: 376 LRCTQRGMTMLDSVIANL 393
              T +G  + D +   L
Sbjct: 354 YLLTTKGKLLADEITLQL 371


>gi|220912730|ref|YP_002488039.1| coproporphyrinogen III oxidase [Arthrobacter chlorophenolicus A6]
 gi|219859608|gb|ACL39950.1| oxygen-independent coproporphyrinogen III oxidase [Arthrobacter
           chlorophenolicus A6]
          Length = 409

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 193/389 (49%), Gaps = 20/389 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQL---- 65
           G G  + G+YVH PFC  +C YCDFN++      G   Q+ +  +  +E+ +   +    
Sbjct: 24  GAGDRAFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYAGTAASEVAFAADVLKDS 83

Query: 66  -TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R +S++FFGGGTP+L+  +++ALIL      W +    E+T EANP SV   +   
Sbjct: 84  GVPDRKLSTVFFGGGTPTLLPAEDLALILRTAIGQWGIEEGAEVTTEANPDSVTPESLAV 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            R AG  R+S G+QS     L+ L R H  S     +  AR+    +S DLIY  P +++
Sbjct: 144 LRDAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPLVVQWARDAGLAVSLDLIYGTPGESL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W+  L+ ALSY  DH+S Y L +E GT      + G++    ++   D Y L   + +
Sbjct: 204 ADWQYSLETALSYEPDHISAYALIVEDGTKLAAQIRRGEVPGIDDDDHADKYELADRLIT 263

Query: 245 AHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           + GL  YE+SN +    ++  HNL YWR  D+ GIGPGAHS V      V     KHP +
Sbjct: 264 SAGLEWYEVSNWARTPEQACRHNLAYWRGDDWWGIGPGAHSHVG----GVRWWNVKHPAA 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   + +       +E L +E +  E +M+  RL+ G+ V   + +    +       L 
Sbjct: 320 YAGRLAQGTSPAAGRETLDAETRNVERVMLEARLQSGLEVASLDTVGRHQI-----AGLI 374

Query: 364 RQGFIERVQFSR--LRCTQRGMTMLDSVI 390
            +G ++     R  L  T +G  + D+V+
Sbjct: 375 AEGLVDPGAAFRGTLVLTLKGRLLADAVV 403


>gi|288916977|ref|ZP_06411349.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EUN1f]
 gi|288351686|gb|EFC85891.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EUN1f]
          Length = 409

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 195/390 (50%), Gaps = 20/390 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           GS   GVYVH P+C  +C YCDFN++         + G  +F+ S  TE +  R + G  
Sbjct: 26  GSRPFGVYVHVPYCAARCGYCDFNTYTPAELGAGGQGGAASFVDSIATEARLARSVLGEG 85

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              ++++F GGGTP+L+   ++A +L  +   + ++ +VE+T EANP SV++   +  R 
Sbjct: 86  ELPVATVFVGGGTPTLLPASDLAKVLRILDDTFGLAGDVEVTTEANPESVDLEALEHLRA 145

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           +G  RIS G+QS     L  L R H        +  AR   F ++S DLIY  P ++   
Sbjct: 146 SGFTRISFGMQSARPHVLAALDRQHTPGRVAEVVGWARQAGFEQLSLDLIYGAPGESEAD 205

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L+  +  A +H+S Y LT+E+GT   +  + G+L+ P +++  D Y       +A 
Sbjct: 206 WAASLEAVIELAPNHVSAYSLTVEEGTKLSRRVRRGELLEPDDDLLADRYLQADEAFAAA 265

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           GL  YEISN S   A    HNL YWR  D+ G+GPGAHS V      V     +HP  + 
Sbjct: 266 GLSNYEISNWSRDRASWCRHNLGYWRGDDWWGLGPGAHSHVG----GVRWWNVRHPTEYA 321

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             V         +E L +  Q  E +M+G+RL EG+     E +A  +        L   
Sbjct: 322 TRVGAGRSPAAAREVLDAAAQRVERVMLGVRLVEGL-----EAVALCDRGRAAADELAAD 376

Query: 366 GFIERVQFS--RLRCTQRGMTMLDSVIANL 393
           G I   Q +  R+  T+RG  + D+V+  L
Sbjct: 377 GLILDRQLAAGRVALTRRGRLLADTVVRAL 406


>gi|227833636|ref|YP_002835343.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454652|gb|ACP33405.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 382

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 192/382 (50%), Gaps = 14/382 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  G+Y+H PFC  +C YCDFN++      G    +++ +   E++ M  +   R   ++
Sbjct: 2   DPFGLYIHVPFCASRCGYCDFNTYTPGELGGDLTSDYLVALEKELE-MAAVQVDREAETV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+  + +  +L  +   + ++   E+T E+NP S     F G   AG  R+S
Sbjct: 61  FIGGGTPSLLGAEGLGRVLSKVRDTFGLAPGAEVTTESNPESTSPEYFAGLLDAGFTRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS     L  L R H    A  A   A    F  ++ D+IY  P +      + L+R
Sbjct: 121 LGMQSASPGVLAVLERAHTPGRAFDAAREAIAAGFEHVNLDMIYGTPTEEDADVALTLER 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   A G   YE+
Sbjct: 181 ALETGVDHISAYSLIVEDGTRMARKVSKGLLPAPDEDVLARRYEMISSTLEAEGFEWYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN  YW  G++ G GPGAHS   +G+ R      K+P +++K V +   
Sbjct: 241 SNWAKPGGECQHNRIYWVDGNWWGAGPGAHSH--LGNER--FYNVKNPRTYIKAVGEGEL 296

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            + E+E L+   +  E +M+GLRLREG+    W   A   +     R+++R G +ER   
Sbjct: 297 PIKEREQLTEADRHTERIMLGLRLREGMPAS-WLAPAAEPV---AARSIER-GLLERAG- 350

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RLR T+ G  + D +I +L V
Sbjct: 351 DRLRVTKAGRLLADGIITDLLV 372


>gi|227503125|ref|ZP_03933174.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49725]
 gi|227076186|gb|EEI14149.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49725]
          Length = 379

 Score =  209 bits (531), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 189/384 (49%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SIS 72
           +   G+Y+H PFC  +C YCDFN++         +    +L  +    ++   R   +  
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDKELEMAAGRVGRTAD 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+  Q ++ ILD +   + +S + E+T E+NP S     F     AG NR
Sbjct: 62  TVFIGGGTPSLLGGQGLSRILDTVRSTFGLSPDAEVTTESNPESTSPEYFAALADAGFNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLG+QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       L
Sbjct: 122 ISLGMQSASHSVLQVLERAHTPGRAFDAAREAREAGFQHVNLDMIYGTPTETDDNVRETL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S     G   Y
Sbjct: 182 DRVLETGVDHVSAYSLIVEDGTRMARKVNKGLLPAPDEDVLARRYEMISSTLEDAGFEWY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN S  G E  HN  YW  G++ G GPGAHS   +G  R   ++ KHP  +++ +   
Sbjct: 242 EVSNWSLPGGECEHNRIYWVDGNWWGAGPGAHSH--LGDERF-FNV-KHPNRYIQTLGNG 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              + + E L+S  +  E +M+GLRLREGI     E   G +     +  + R G +ER 
Sbjct: 298 ELPIKDSETLTSPDRHMEKVMLGLRLREGIP----EAWLGSHAAPALKGFIDR-GLLERA 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+ G  + D ++++L +
Sbjct: 353 G-QRVRVTKPGRLLADGIVSDLLI 375


>gi|296333292|ref|ZP_06875745.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305675203|ref|YP_003866875.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296149490|gb|EFG90386.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413447|gb|ADM38566.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 379

 Score =  209 bits (531), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 180/337 (53%), Gaps = 7/337 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ +   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNALEQEMINTIAKTGKPDLKTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  + +  ++D I +    SS + E  +EANP  +        +++GVNR+S GVQ+
Sbjct: 63  PTSLSEEQLKKLMDMIIRVLKPSSTLSEFAVEANPDDLSAEKLNILKESGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L  +GR H   +  A+   AR I F  +S DL++ LP QT+   +  L  ALS  
Sbjct: 123 FEDDLLEKIGRVHKQKDVFASFERAREIGFDNISLDLMFGLPGQTLKHVDHSLNTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP +    ++Y +      A+G+H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEMVMRRMEANGIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GAH  +  G+  V +   KH   ++ ++ + G    + 
Sbjct: 243 AGLESKHNLTYWSNEEYFGFGAGAHGYIS-GTRTVNVGPVKH---YIDLIAEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +++E+Q +E + +GLR   G+S K +    GR+LD
Sbjct: 299 HEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLD 335


>gi|126652838|ref|ZP_01724983.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
 gi|126590374|gb|EAZ84494.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
          Length = 381

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 179/330 (54%), Gaps = 8/330 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFG 77
           GVY+H PFC + C YCDFN    + +   E +I++   EM+   +      R I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKFYFKNQPVDE-YIEALGKEMELATKKNPESFRHIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + PQ +  +L  I     ++S  E T EANP  + V   Q   + GVNR+S+GV
Sbjct: 63  GGTPTALSPQQLDKLLTLIRTYIPMNSVTEFTSEANPDELSVEKLQVLFEGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L+ +GR H+       I +A+ I F  +S DL+Y LP QTM QW+  L++AL+
Sbjct: 123 QSFDQELLQKIGRTHSNEHVYETIAMAKEIGFQNISIDLMYGLPGQTMVQWKDSLEKALA 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L+LP+E++  D+Y++       HGL  YEISN 
Sbjct: 183 LDLPHFSAYSLIVEPKTIFYNQYAKGKLLLPTEDLEADMYDVLMQQMELHGLQQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW   +Y G G GAH  +      V  S     + +++ V      +V
Sbjct: 243 AKPGYHSEHNKIYWDNDEYAGFGAGAHGYLA----GVRYSNHGPLKKYMETVFAGELPIV 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            +  +S  ++ +E + +GLR  EG+  K +
Sbjct: 299 HEHEVSQAEKREEQMFLGLRKTEGVKHKIY 328


>gi|239941056|ref|ZP_04692993.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|239987535|ref|ZP_04708199.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           11379]
 gi|291444496|ref|ZP_06583886.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|291347443|gb|EFE74347.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
          Length = 413

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 199/396 (50%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  R
Sbjct: 25  LEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAVHLIEEVRRAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+   
Sbjct: 85  KVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIRDEFGLADDAEITTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+ G NR+S G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LEALREGGFNRVSFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 205 GESDDDWRATLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEIPMTDDDAHADRYLIAD 264

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +A G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EAFAAAGFHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +     V +E L+ E +  E +++ LRLREG  +   ++L    L     
Sbjct: 321 HPGAYAQALAEGRSPGVGREILAEEDRRVERILLELRLREGCPL---DLLKPDGL--AAS 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G ++   + + R   T RG  + D+V+ +L
Sbjct: 376 RRALTDGLLDPEPYDKGRAVLTLRGRLLADAVVRDL 411


>gi|283796181|ref|ZP_06345334.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. M62/1]
 gi|291076399|gb|EFE13763.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. M62/1]
          Length = 465

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 203/373 (54%), Gaps = 41/373 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGP 68
           TG     L +Y+H PFC++KC YCDF S    +  G+E    +++    E++      G 
Sbjct: 20  TGSRPIPLELYIHIPFCIRKCAYCDFLS----FPAGEEERSLYVEQLAREIEEAGAAFGE 75

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               ++F GGGTPS++E   I  I+D + +++ +S   EIT+E NP +      + +R++
Sbjct: 76  YVAETVFIGGGTPSVLEGAQIGRIMDAMRESFHLSEEAEITMEVNPGTASPEKLRSWRRS 135

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+SLG+QS + + LR+LGR H A + + + H AR   F  ++ DL+ ALP QT   W
Sbjct: 136 GINRLSLGLQSAQNRELRYLGRIHTAEDFLESFHAAREAGFENINVDLMSALPGQTEEAW 195

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK------MHKDG------DL-VLPSENVAVD 234
           E  L++ LS   +H+S Y L IE+GT FY+      M + G      DL  LP E+    
Sbjct: 196 EDTLKKVLSLMPEHISAYSLIIEEGTPFYEKYGTEGMERKGKARARADLPPLPDEDTERS 255

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KV 288
           +Y  T+ I S  G H YEISN++  G E  HN  YW   +Y+G+G GA S +       +
Sbjct: 256 MYEATERILSEAGYHRYEISNYARPGFECRHNRGYWTGTEYLGLGLGASSYIIRNREADL 315

Query: 289 G-----SHRVAISIEKH----PE--SWLKMVRKN---GHAVVEKEFLSSEQQADEFLMMG 334
           G     +  +A+S  +     P+   +L   R++   G     ++ L+ + + +EF+ +G
Sbjct: 316 GGCPDEAGLLALSGAERFLNTPDMGKYLAYSREDFRAGRHTEGRDRLTWKDRMEEFMFLG 375

Query: 335 LRLREGISVKDWE 347
           LRL EG++ +++E
Sbjct: 376 LRLTEGVAEQEFE 388


>gi|269926469|ref|YP_003323092.1| oxygen-independent coproporphyrinogen III oxidase [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269790129|gb|ACZ42270.1| oxygen-independent coproporphyrinogen III oxidase [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 389

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 14/343 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SS 73
           S+ +G+YVH PFC  KC YCDFN +      G+   I  ++  +         + +   +
Sbjct: 13  SSYVGLYVHIPFCKTKCIYCDFNCYA-----GKNALIPDYVLALGKELVTYSDQGLVART 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTPSL+ P  +  I+ G A+++  +    EIT+EANP +V    F+     GVNR
Sbjct: 68  LYMGGGTPSLLSPSQVLYIV-GTARDYLRLVDGAEITMEANPGTVSEQYFRDILAMGVNR 126

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+QS ++  LR L R+H   EA+ A   AR   F  +S DLIY LP QT+  W   L
Sbjct: 127 ISIGIQSFKDDDLRRLARHHTVEEALEAYRAARAAGFENISVDLIYGLPFQTLDDWRHNL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            R +    DH+SLY LT+E+GT  +++   G L  P +++  D+Y L Q +    G   Y
Sbjct: 187 SRVVDIEPDHISLYALTVEEGTPLHRLISRGKLPSPDDDLMADMYELAQEVLEKAGYIHY 246

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G +S HN+ YWR   +IG G GA+  +    + V    E  P  ++ ++   
Sbjct: 247 EISNWCRPGKQSKHNMIYWREEPFIGAGAGAYGFL----NSVRYYNELLPSKYISLINNG 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
              +V +E LS   +  E++++ LRL EG++ ++++   G++L
Sbjct: 303 QSPIVWQEELSVPIERSEYVILHLRLAEGVNAEEFQSRYGQSL 345


>gi|269794655|ref|YP_003314110.1| coproporphyrinogen III oxidase, anaerobic [Sanguibacter keddieii
           DSM 10542]
 gi|269096840|gb|ACZ21276.1| coproporphyrinogen III oxidase, anaerobic [Sanguibacter keddieii
           DSM 10542]
          Length = 418

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 196/399 (49%), Gaps = 22/399 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGP 68
           +G      GVY+H PFC  +C YCDFN++      G   Q  +  + ++E++   +L   
Sbjct: 23  SGAADRRFGVYMHVPFCTVRCGYCDFNTYTASELGGGASQSAYATTAVSEIEMAGRLMDA 82

Query: 69  -----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R +S++F GGGTP+L+  +++A +L  +   W ++ +VE+T EANP SV   +  
Sbjct: 83  AGLPRREVSTVFVGGGTPTLLPARDLATMLAAVRSTWGLADDVEVTTEANPDSVTPESLA 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
               AG  R+S G+QS     L  L R H+       +  AR++   +S DLIY  P +T
Sbjct: 143 VLADAGFTRVSFGMQSAVPSVLATLERTHDPRRIPDVVRWARDVGLDVSLDLIYGTPGET 202

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   ++ AL+  VDH+S Y L +E+GT      + G L LP+E+     Y L   + 
Sbjct: 203 LDDWRTSVESALATGVDHVSAYALVVEQGTKMAAQVRRGQLTLPNEDDQAAKYELADDLL 262

Query: 244 SAHGLHAYEISN--HSFLGAESL--HNLNYWRYGDYIGIGPGAHSRVK---VGSHRVAIS 296
           +  GL  YE+SN   +  G +    HNL YWR  D+ G+GPGAHS +     G+  +   
Sbjct: 263 TEAGLGWYEVSNWARTVDGVQRACRHNLAYWRGDDWWGVGPGAHSYLGSDVPGTRGLRWW 322

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP  +   + +       +E +  +    E +M+G+RLREG +  D    A + +  
Sbjct: 323 NVKHPVRYANRLAEGLSPSAGQETIGDDSAQLERVMLGVRLREGFATADLSPRARKAVAQ 382

Query: 357 ECERNL--QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                L   R     RV  +R     RG  + D+V+ +L
Sbjct: 383 HVADGLVDGRAAIAGRVVLTR-----RGRLLADTVVRDL 416


>gi|270295870|ref|ZP_06202070.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D20]
 gi|270273274|gb|EFA19136.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D20]
          Length = 376

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 191/377 (50%), Gaps = 10/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     ++ +I++  TE++  +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTR--SELKQQYIRALCTELKTRKGYLKEEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I + +      EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAHEDFEQIFRTIKEVYGTEHAEEITLEANPDDLTEEYVSMLRTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  +L+ L R HNA++AIAA+H  R   F  +S DLIY LP +T  +WE +LQ+A+   
Sbjct: 121 FDAPTLKLLNRRHNAAQAIAAVHRLRQAGFRNISIDLIYGLPDETDQRWERDLQQAVGLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  +V  ++       A G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTRIYEMLQSHRISEVDEESSVRFFSALMDTLGAAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G GP AHS           S+    E ++K + + G    E 
Sbjct: 241 PGMYSRHNTAYWKGIPYLGCGPSAHSFNAETREWNTASL----EGYIKSI-EEGQRSSET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRL 376
           E L    + +E++M  LR   G+S+   E   G  L   C +      Q     +Q  RL
Sbjct: 296 EILDKVTRYNEYIMTSLRTMWGVSLTYTEEAFGTELRQYCTKMAAPYLQSHKLEMQADRL 355

Query: 377 RCTQRGMTMLDSVIANL 393
             T+ G+ + D +I++L
Sbjct: 356 HLTREGIFVSDGIISDL 372


>gi|193211903|ref|YP_001997856.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobaculum
           parvum NCIB 8327]
 gi|193085380|gb|ACF10656.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobaculum
           parvum NCIB 8327]
          Length = 375

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 196/376 (52%), Gaps = 10/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC ++CPYCDF    R   V  E F ++   E      L   R+I +I FGGGT
Sbjct: 4   LYVHIPFCRERCPYCDFFLITRPGFV--ERFFEALAVETASKASLLEGRTIDAIHFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+    I+  L+ +A    +S++ EIT+EANP  ++       R AGVNR+S+GVQS 
Sbjct: 62  PSLVPVSFISGWLEQVAGLAGLSADTEITLEANPEDLDTATLDALRAAGVNRLSIGVQSF 121

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++ LR LGR H A++A   +  A   FP +S DLI     ++  +WE +L+ AL +   
Sbjct: 122 TDRKLRALGRAHTAADAERTVSEALERFPSVSIDLICGAEGESAREWEGDLRAALRFRPQ 181

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S+Y LT+E+ T  ++    G   LP E     +Y     +    G   YE+SN++  G
Sbjct: 182 HVSVYMLTLEEKTRLWRDVSKGLRELPGEGQQASMYRQAMMMLCGAGYRHYEVSNYALEG 241

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S +NL+ W+   Y+G GP AHS ++     V  S   +   +L       +A   +E 
Sbjct: 242 HHSRYNLSSWKREPYLGFGPSAHSFLQTAEGEVRFSNASNLHRYLT---DPANATDFREV 298

Query: 321 LSSEQQADEFLMMGLRLREGISV---KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           L++ Q+ DE + + LR+R+G++V   +    L  + LD    R LQ +G+I  V+  ++ 
Sbjct: 299 LTAGQRFDEEVFLSLRIRKGLTVEFLRKGHTLGLQRLDDRLAR-LQAEGWIA-VEGGQVT 356

Query: 378 CTQRGMTMLDSVIANL 393
            T  G    D V   L
Sbjct: 357 LTDDGFLFADLVAGEL 372


>gi|306836636|ref|ZP_07469602.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49726]
 gi|304567466|gb|EFM43065.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49726]
          Length = 379

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 186/384 (48%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SIS 72
           +   G+Y+H PFC  +C YCDFN++         +    +L  +    ++   R   +  
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDKELEMAAGRVGRTAD 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+  Q ++ ILD +   + +S + E+T E+NP S     F     AG NR
Sbjct: 62  TVFIGGGTPSLLGGQGLSRILDTVRSTFGLSPDAEVTTESNPESTSPEYFAALADAGFNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLG+QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       L
Sbjct: 122 ISLGMQSASHSVLQVLERAHTPGRAFDAAREAREAGFQHVNLDMIYGTPTETDDNVRETL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S     G   Y
Sbjct: 182 DRVLETGVDHVSAYSLIVEDGTRMARKVNKGLLPAPDEDVLARRYEMISSTLEEAGFEWY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN S  G E  HN  YW  G++ G GPGAHS   +G  R      KHP  +++ +   
Sbjct: 242 EVSNWSLPGGECEHNRIYWVDGNWWGAGPGAHSH--LGDERFYNV--KHPNRYIQTLGNG 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              + + E L+   +  E +M+GLRLREGI     E   G +     E  + R G +ER 
Sbjct: 298 ELPIKDSETLTGADRHMEKVMLGLRLREGIP----ESWLGSHAAPALEGFIDR-GLLERA 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+ G  + D ++++L +
Sbjct: 353 G-QRVRVTKPGRLLADGIVSDLLI 375


>gi|284037726|ref|YP_003387656.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
 gi|283817019|gb|ADB38857.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
          Length = 374

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 204/381 (53%), Gaps = 17/381 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC + C YCDF+       +GQ++  + +  TE+   +     +++ +I+FGGG
Sbjct: 3   LYLHIPFCKQACHYCDFHFST---SLGQKSALVDALCTEIALQKSYLPDQALETIYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    +A +   I  +++VS   EIT+EANP  ++    Q  R+  VNR+S+G+Q+
Sbjct: 60  TPSLLTEAELAQVFTAIHAHFSVSPTAEITLEANPDDLDSGKLQMLRRY-VNRLSIGIQT 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E SLR++ R H A+EA   + LAR   F  MS DLIY +P +    W+++LQ+ L+  
Sbjct: 119 FDETSLRWMNRAHTATEAEVCVGLARQAGFENMSVDLIYGIPNRDNQAWQLDLQKILALN 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNHS 257
           V HLS Y LTIE  T F +  K G L    E+ A   +  LT ++T+A G   YEISN +
Sbjct: 179 VPHLSAYALTIEPDTAFGRWQKKGKLPPADEDTAAGQFEELTSALTTA-GYAHYEISNFA 237

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + HN  YW+   Y+GIGP AHS      H    ++  +      + +    A +E
Sbjct: 238 RDGQYARHNTAYWQRRPYLGIGPSAHS---YNGHSRQYNLANNVRYIAAIAQGKLPATLE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
           +  L+   Q +E+L+ GLR + G S+ + + +   +      R+L    + G++ R    
Sbjct: 295 E--LTVADQVNEYLLTGLRTQWGCSLTELDTMLAGDFSTMQARDLAAMYKTGWLVR-HGD 351

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            L  TQ G    D V A+L V
Sbjct: 352 TLLLTQPGKLFADRVAASLFV 372


>gi|305681366|ref|ZP_07404173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium matruchotii ATCC 14266]
 gi|305659571|gb|EFM49071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium matruchotii ATCC 14266]
          Length = 371

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 197/379 (51%), Gaps = 15/379 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
            GVY+H PFC  +C YCDFN++    ++G     +++L  ++   +L    R   +IF G
Sbjct: 2   FGVYIHVPFCSSRCGYCDFNTYTPG-ELGTSASPETYLDALEQELELAEFKRPADTIFIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  IL  I   + ++   EIT E+NP S     F   R AG  RISLG+
Sbjct: 61  GGTPSLLGAQGLRRILTAIRNTFGINPGAEITTESNPESTSPEFFAELRDAGFTRISLGM 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ L R H    A AA+  AR   F  ++ D+IY  P +T    +  +++ ++
Sbjct: 121 QSASAHVLQVLERRHTPGRAFAAVAEARAAGFAHINLDMIYGTPTETDADVQATVEQVIA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VDH+S Y L +E GT   +  + G+L  P E+V  D Y L  +   A G   YE+SN 
Sbjct: 181 SGVDHVSAYSLIVEDGTRMARKVRRGELPAPDEDVYADRYALIDAALVAAGYRWYEVSNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YWR  D+ G GPGAHS   +G  R      KHP ++ + +      V 
Sbjct: 241 AQPGGECRHNLGYWRDEDWWGAGPGAHS--HLGDLR--FYNVKHPATYAQRLVSGVLPVA 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
             E L++ Q+ +E +M+GLRLREG+ V  +        D E  +  +  G I+ V   R+
Sbjct: 297 GVEKLTAAQRHEERVMLGLRLREGLPVTCFN-------DKELAKAREFPGLID-VSDQRV 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T+ G  + D +IA++ V
Sbjct: 349 TVTEAGRLLADGMIADILV 367


>gi|307709061|ref|ZP_07645520.1| coproporphyrinogen III oxidase [Streptococcus mitis SK564]
 gi|307620007|gb|EFN99124.1| coproporphyrinogen III oxidase [Streptococcus mitis SK564]
          Length = 376

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 213/378 (56%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYK---VGQENFIQSFLT-EMQWMRQLTGPRSISSIFFG 77
           YVH PFC + C YCDF+    + +   +  E+ ++ F + ++Q +R         +++ G
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPVDIYLEHLLEEFRSYDIQKLR---------TLYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    + ++L G+ KN  +S+  E+TIEANP  ++ +     + + VNR+SLGV
Sbjct: 60  GGTPTALSASQLEVLLKGLTKNLDLSALEELTIEANPGDLDADKIAVLKNSAVNRVSLGV 119

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q+ +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A
Sbjct: 120 QTFDDKMLKKIGRSHLVKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAALERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAV-EEGNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  ++L +QG ++ +
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMVRFEEKFGRSFDGLYGEIVKDLVQQGLMQ-I 351

Query: 372 QFSRLRCTQRGMTMLDSV 389
           +  R+R T+RG+ + D+V
Sbjct: 352 EGDRVRMTKRGLFLGDTV 369


>gi|56707262|ref|YP_169158.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110669732|ref|YP_666289.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC198]
 gi|224456318|ref|ZP_03664791.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|254369945|ref|ZP_04985953.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254874096|ref|ZP_05246806.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|56603754|emb|CAG44717.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110320065|emb|CAL08100.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC198]
 gi|151568191|gb|EDN33845.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254840095|gb|EET18531.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|282158373|gb|ADA77764.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis NE061598]
          Length = 380

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 196/377 (51%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF           P E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKRPK----FPDEEILESIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|284048069|ref|YP_003398408.1| oxygen-independent coproporphyrinogen III oxidase [Acidaminococcus
           fermentans DSM 20731]
 gi|283952290|gb|ADB47093.1| oxygen-independent coproporphyrinogen III oxidase [Acidaminococcus
           fermentans DSM 20731]
          Length = 377

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 199/368 (54%), Gaps = 15/368 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFCV KC YCDF S+         ++ +  + E+            ++++FGGG
Sbjct: 10  ALYVHIPFCVHKCAYCDFASYQIYNDHIMTDYARRLVEEISAWTPALPVSPTATVYFGGG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  +++A I+  + +        E T+EANP +V+    + YR+ G +R+SLG+QS
Sbjct: 70  TPSVLPLEDLAAIVTALKERGFWQHPAEATLEANPGTVDRERLRFYRQLGFDRLSLGIQS 129

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  +GR H A +A  AI LAR   F R+S DLIY  P QT+      L+R L   
Sbjct: 130 FQPEELAAMGRIHTAEQAEEAIALAREAGFRRISGDLIYGYPGQTVETVRDSLERLLDTG 189

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDH+S+Y LT+E+GTL  K  ++G  +LPSE+ +  +Y+         G H YEISN + 
Sbjct: 190 VDHVSVYGLTVEEGTLLAKQVREGKALLPSEDASGTMYDFLMEALPQAGYHRYEISNFAR 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW Y  Y+  G  A  R   G  R     E +P +    +++   A  E+
Sbjct: 250 PGQESRHNQVYWHYDPYMAFGAAA-CRFD-GKIR-----ETNPRNLQAYLQE---APPER 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFSR 375
           E L+ E +  E + M LR  +G+S++++    G +   +  E   + ++QG+I R +  R
Sbjct: 300 EILTCEDRRAELVFMNLRTVKGLSLEEFTQRTGEDFFHIYEEGFTHCRKQGWITR-EGDR 358

Query: 376 LRCTQRGM 383
           +R T++GM
Sbjct: 359 IRLTEQGM 366


>gi|297199599|ref|ZP_06916996.1| coproporphyrinogen III oxidase [Streptomyces sviceus ATCC 29083]
 gi|197713473|gb|EDY57507.1| coproporphyrinogen III oxidase [Streptomyces sviceus ATCC 29083]
          Length = 420

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 198/396 (50%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++  R
Sbjct: 32  LAGSADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYAETLIDEIRLAR 91

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++++ E+T EANP SV+   
Sbjct: 92  KVLGDDPRPVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAADAEVTTEANPESVDPEY 151

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 152 LAALREGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFAHVNLDLIYGTP 211

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 212 GESDDDWRASLEAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDEHADRYLIAD 271

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           S+ +  G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 272 SMLAEAGFDWYEVSNWATSEAARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 327

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E L  E +  E +++ LRLREG+ +    +L  R   +   
Sbjct: 328 HPGAYAAALASGRSPGAGRELLPEEDRRVERILLELRLREGVPLS---LL--REEGLAAS 382

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R    +G +E   +   R   T RG  + D+V+ +L
Sbjct: 383 RRALGEGLLEGGPYEEGRAVLTLRGRLLADAVVRDL 418


>gi|270292462|ref|ZP_06198673.1| coproporphyrinogen dehydrogenase [Streptococcus sp. M143]
 gi|270278441|gb|EFA24287.1| coproporphyrinogen dehydrogenase [Streptococcus sp. M143]
          Length = 376

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 211/376 (56%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E +        + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+
Sbjct: 62  TPTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKHSPVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+S
Sbjct: 122 FDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMDQVKENVAKAIS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A +
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLNAV-EAGNARI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG ++ +  
Sbjct: 295 TEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLMQ-IDG 353

Query: 374 SRLRCTQRGMTMLDSV 389
             +R T+RG+ + D+V
Sbjct: 354 DHVRMTKRGLFLGDTV 369


>gi|307152437|ref|YP_003887821.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
 gi|306982665|gb|ADN14546.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
          Length = 429

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 210/410 (51%), Gaps = 33/410 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDF-------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           T +G      Y+H PFC ++C YCDF       N+ +      QE ++Q+   EM+    
Sbjct: 19  TIEGDIPRSAYIHIPFCRRRCYYCDFPISVLGNNTDINTSGSIQE-YVQALCQEMRVTPS 77

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  + ++FFGGGTPSL+  +++  IL  +++ + ++S+ EI++E +P +      +G
Sbjct: 78  RGQP--LDTVFFGGGTPSLLPVKSLEQILTTLSQQFGITSSAEISLEMDPGTFTKEQLKG 135

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AGVNR+SLGVQS E++ L+  GR H+  +   AI   R +  P +S DLI  LP QT
Sbjct: 136 YLEAGVNRVSLGVQSFEDELLKICGRFHSKKDIFIAIDHIRALEVPNLSLDLISGLPHQT 195

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + QWE  L  A+S A +HLS Y L +E  T+F K ++ G+  LP++ +   +Y   Q   
Sbjct: 196 LQQWETSLLSAISLAPNHLSCYDLVLEPVTVFGKKYQPGETPLPTDEITALMYRTAQKYL 255

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +  G   YE+SN++  G +  HN  YW    Y G G GA S V +          K   S
Sbjct: 256 TNSGFEHYEVSNYAQPGYQCRHNRVYWENRAYYGFGMGAASYVSLQRFSRP-RTRKDYYS 314

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W+  + ++G   ++     +  Q  E LM+GLRL +G+++       G  +  E  + LQ
Sbjct: 315 WVTQLIESG-GKIDCPPTGAVDQLLETLMLGLRLADGVNLSQLNHQYGEKVLHEIGKTLQ 373

Query: 364 ---RQGFIE-------RVQF---------SRLRCTQ-RGMTMLDSVIANL 393
              RQG++E       RV F          RLR T   G    ++V+A L
Sbjct: 374 PYFRQGWVEGITQQGNRVNFRETQDIFALERLRLTDPEGFLFSNTVLAAL 423


>gi|254373533|ref|ZP_04989020.1| coproporphyrinogen III oxidase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571258|gb|EDN36912.1| coproporphyrinogen III oxidase [Francisella novicida GA99-3549]
          Length = 380

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 196/377 (51%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAAYLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKPPK----LPDEEILESIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|147677209|ref|YP_001211424.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Pelotomaculum thermopropionicum SI]
 gi|146273306|dbj|BAF59055.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Pelotomaculum thermopropionicum SI]
          Length = 378

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 190/347 (54%), Gaps = 9/347 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGP-RSISSIF 75
           ++G+YVH PFCVKKC YC F S  R  +     ++ + L E++ +   L G  + +SS+F
Sbjct: 2   AIGLYVHVPFCVKKCLYCGFVS-FRLDREAAGLYLNALLREIELYGAALCGSEKEVSSLF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  IL  +  ++ +    E+T+EANP +V +      R+AGVNR+SL
Sbjct: 61  IGGGTPTCLPGDGLIKILQALKVHFRLLPECEVTVEANPGTVTLGGLSVLREAGVNRLSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +++ L+ LGR H + EA  A+ LAR   F  ++ D I+ +P QT  +W   L++A
Sbjct: 121 GVQSFQDRLLKVLGRAHGSGEAEKAVRLARQAGFANLNLDFIFGIPGQTAAEWLETLEKA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A +H+++Y L +E+GT   +    G L    E + + +Y         HG   YEIS
Sbjct: 181 VELAPEHIAVYGLQLEEGTPLERAVAGGGLEPCPEELELFMYRTAVEYLKKHGYIHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E LHNL YW    Y+G+GP AHS  +    R A   E   E + +++ +    
Sbjct: 241 NFARPGRECLHNLGYWLNRPYLGLGPAAHSCFR--GERFA--NEPSLERYCRLLSQGVFP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           V E+  LS  ++  E + +GLRL  G+ ++ +    GR  + E  RN
Sbjct: 297 VQERHALSLAEEMAETMFLGLRLIRGVDLEGFRSRFGRRAE-EVYRN 342


>gi|117927989|ref|YP_872540.1| coproporphyrinogen III oxidase, anaerobic [Acidothermus
           cellulolyticus 11B]
 gi|117648452|gb|ABK52554.1| coproporphyrinogen III oxidase, anaerobic [Acidothermus
           cellulolyticus 11B]
          Length = 400

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 194/384 (50%), Gaps = 20/384 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQ-LTGPRSISSI 74
            G+YVH P+C  +C YCDFN++      G  +   F+   + E++  R+ L+G   + ++
Sbjct: 26  FGIYVHVPYCAARCGYCDFNTYTAAELGGHASRLTFVHDAIAELRMARRFLSGDAVVQTV 85

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTP+L+   ++  IL  I   + +++  E+T+EANP SV+          G  RIS
Sbjct: 86  FFGGGTPTLLPAAHLIEILRVIDGEFGLAAGAEVTVEANPESVDAEMLARLAAGGFTRIS 145

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI---FPRMSFDLIYALPKQTMTQWEMEL 191
            G+QS   + L  L R H  +     + +A+     F  ++ DLIY  P ++   W   L
Sbjct: 146 FGMQSAVPRILALLDRRH--TPGTPELRVAQAFAAGFQHVNLDLIYGTPTESDADWRRSL 203

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A++   DH+S Y LT+E GT   +    GDL  P ++VA D Y       SA G   Y
Sbjct: 204 EAAVAAGPDHISAYALTVEPGTALARRIARGDLPAPDDDVAADRYRYADEFLSAMGYSWY 263

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  GAE  HNL YWR G + G+GPGAHS +   + R   ++ KHP ++ + +   
Sbjct: 264 EISNWARPGAECRHNLGYWRDGVWWGVGPGAHSFI---AGRRWWNV-KHPAAYAERLAAG 319

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              V   E LS   +  E +M+ LRL EG+        A R  +          G ++  
Sbjct: 320 VLPVAGVEVLSDADRHVEDVMLRLRLAEGLPAA-----ALREGEYAAAVRAAADGLLDAD 374

Query: 372 QFSRLRC--TQRGMTMLDSVIANL 393
           + +  RC  T RG  + D+VI ++
Sbjct: 375 RLAAGRCVLTLRGRLLADTVIRDI 398


>gi|299535785|ref|ZP_07049106.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
 gi|298728985|gb|EFI69539.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
          Length = 381

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/374 (33%), Positives = 195/374 (52%), Gaps = 22/374 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFG 77
           GVY+H PFC + C YCDFN    + +   E +I++   EM    +      R+I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKFYFKNQPVDE-YIEALGKEMALTTEKHSEKFRNIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P+ +  +L  I     ++S  E T EANP  +     Q     GVNR+S+GV
Sbjct: 63  GGTPTALSPEQLDKLLTSIHTYIPMNSVTEFTSEANPDELSAAKLQVLFDGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ +GR H+       I LAR I F  +S DL+Y LP QTM QW+  L +A +
Sbjct: 123 QSFDQGLLQKIGRTHSNDHVYETIALARKIGFRNISIDLMYGLPGQTMAQWKDSLAKAFT 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L LP+E++  D+Y++     + HGL  YEISN 
Sbjct: 183 LDLPHFSAYSLIVEPKTIFYNQYAKGKLYLPTEDLEADMYDVLMQQMALHGLQQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP--ESWLKMVRKNGHA 314
           +  G  S HN  YW   +Y+G G GAH  +        I    H   + +++ +  N   
Sbjct: 243 AKPGYRSEHNKIYWDNDEYVGFGAGAHGYL------AGIRYSNHGPLKKYMEAIEANELP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE------MLAGRNLDIECERNLQRQGFI 368
           +V    +S  ++ +E + +GLR  EG+    +E      M A  ++ I   ++L  +G +
Sbjct: 297 IVHAHEVSQVEKREEQMFLGLRKTEGVMHSIYEEKFKTPMSAHYDVVI---KDLVSKGLL 353

Query: 369 ERVQFSRLRCTQRG 382
           E+ +   +R T++G
Sbjct: 354 EQDELG-VRLTRKG 366


>gi|295092936|emb|CBK82027.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coprococcus sp. ART55/1]
          Length = 432

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 218/405 (53%), Gaps = 32/405 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           L +Y+H PFCVKKC YCDF S       +  Y V +E +I++   E++    L     + 
Sbjct: 31  LSIYIHIPFCVKKCAYCDFLSFPVGAACMSGYGVYREKYIEALCEELKSYSYLAETHKVR 90

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTPS++EP  I L++  + K + V+ + EI+IE NP ++       Y   G+NR
Sbjct: 91  TIYIGGGTPSILEPDEITLVMTTVRKLFDVAEDAEISIEVNPGTLTSRKAAEYIANGINR 150

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS ++  L  LGR HN  + +AA  +AR   F  ++ DL+  +P QTM  +   L
Sbjct: 151 MSIGLQSAQKNELEALGRIHNYDQFLAAFDMAREAGFRNINIDLMSDIPGQTMRSYLDTL 210

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV--LPSENVAVDLYNLTQSITSAHGLH 249
            + L    +H+S Y L +E GT    +  D +L+  +P E+V   +Y++T  +    G H
Sbjct: 211 DKVLRCKPEHISSYSLIVEDGT---PLAADENLLSQIPDEDVDRQMYDITNKLLGTGGYH 267

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-------KHPE 302
            YEISN++  G E  HN+ YW  G+YIGIG GA S +    +    S+E       +H E
Sbjct: 268 RYEISNYAKAGYECRHNIVYWTLGEYIGIGIGAASFLYGRRYTNTSSLEDYIDGMARHRE 327

Query: 303 --SWLKMVRKNGHA--VVE-----KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             ++   V  +G A  ++E     +E L +++  +E++ +GLR+  G+S + +    G +
Sbjct: 328 LMTFGDHVANSGKARDIIEHMRNVEEELDADRLMEEYMFLGLRMISGVSAEKFNDYFGHS 387

Query: 354 L-DI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           + DI        +  G +E      +R T++G+ + ++++A+  +
Sbjct: 388 IYDIYGSVIDKYKSTGHLED-DHGLIRLTKKGIDVSNTILADFLI 431


>gi|118498189|ref|YP_899239.1| coproporphyrinogen III oxidase, anaerobic [Francisella tularensis
           subsp. novicida U112]
 gi|254374997|ref|ZP_04990477.1| coproporphyrinogen III oxidase [Francisella novicida GA99-3548]
 gi|118424095|gb|ABK90485.1| coproporphyrinogen III oxidase, anaerobic [Francisella novicida
           U112]
 gi|151572715|gb|EDN38369.1| coproporphyrinogen III oxidase [Francisella novicida GA99-3548]
          Length = 380

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 13/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      E + Q  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGV
Sbjct: 68  GGTPSLFKAEYLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRISLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQDDKLKILGRIHNYENIYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+S  
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKPPK----LPDEEILESIEIAGKEALAHAGFKQYEVSAF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYW +GDYIGIG GAHS++     +    + KH     K+  +    + 
Sbjct: 244 AKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHP--KIYTQTDKFIK 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           +   ++ ++   EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  
Sbjct: 302 DSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNA 359

Query: 374 SRLRCTQRGMTMLDSVI 390
           ++++ T +G   L+  I
Sbjct: 360 NQIKPTAKGYLFLNDCI 376


>gi|260219848|emb|CBA26791.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           HI0463 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 320

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/262 (40%), Positives = 161/262 (61%), Gaps = 5/262 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +YVH P+C+KKCPYCDFNSH +     QE  +I + + +++    L   R+I SIF G
Sbjct: 44  LSLYVHLPWCIKKCPYCDFNSHEQAKDGLQEKRYIDAVIADLEAALPLIWGRNIHSIFIG 103

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P++I  +L  I     + ++ EIT+EANP + E + F+ +R AGV R+S+GV
Sbjct: 104 GGTPSLFSPESIDRLLGDIRARLRLEADCEITMEANPGTFEKDRFKAFRGAGVTRLSIGV 163

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L+ LGR H+ ++A+AA+  A   F   + D++YALP QT  Q +++L  AL +
Sbjct: 164 QSFNDTHLKALGRVHDRAQALAAVEEAAASFNTFNLDIMYALPGQTQAQLDVDLATALQF 223

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S+Y LTIE  T F K        +P ++ A  + +     T+A G+  YE+S ++
Sbjct: 224 QPPHISIYHLTIEPNTYFAKFPPQ----IPEDDTAYAMLDRITEATAAAGMDRYEVSAYA 279

Query: 258 FLGAESLHNLNYWRYGDYIGIG 279
             G    HN+NYW++GDY+G+G
Sbjct: 280 RQGHRCFHNVNYWQFGDYLGLG 301


>gi|260881517|ref|ZP_05404601.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Mitsuokella multacida DSM 20544]
 gi|260848644|gb|EEX68651.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mitsuokella multacida DSM 20544]
          Length = 383

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 195/362 (53%), Gaps = 23/362 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYK--------VGQENFIQSFLTEMQWMRQLTGPRSI 71
           G+Y+H PFC +KC YCDF S   R +        + +E  +Q  L   +W      PR+I
Sbjct: 8   GLYIHIPFCRQKCFYCDFPSFAGRERYEADYTDALCRELAVQGVLYREKW----GSPRTI 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
              + GGGTPSL+    +  IL  IA  +  +++ E T+E NP +V+    +  R  GVN
Sbjct: 64  ---YMGGGTPSLLPTGLLEKILQAIADVFGDAADREFTVECNPGTVDAAKLRALRAGGVN 120

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ+ ++  L+ +GR H  ++A  A+ LAR   F  +S DLIY LP +++   E +
Sbjct: 121 RLSFGVQTFDDTLLKKIGRIHTGAQAREAMALARAAGFQNVSMDLIYGLPGESLADLERD 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  ++   +H+S+Y L +E+GT F KM + G L LP E+    +Y+   +   AHG   
Sbjct: 181 LEAMVALEPEHISIYGLQLEEGTAFAKMQEMGRLALPDEDTVERMYDTMTAFLPAHGYAR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES HNL+YW+   Y+G+G  AHS ++   +    ++ + P ++++ +R 
Sbjct: 241 YEISNFAKPGFESCHNLSYWQDVSYLGVGAAAHSYLEGQRYE---NVREIP-AYIEGIRT 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGF 367
                 ++E ++ E   +EF  + LR   GI    +E   G  L+         L+RQG 
Sbjct: 297 GKGVRRQEEAMTREIAMEEFAFLALRTACGIDRARFERRFGMPLEAVYAGAIAKLKRQGL 356

Query: 368 IE 369
           +E
Sbjct: 357 LE 358


>gi|326779437|ref|ZP_08238702.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces cf.
           griseus XylebKG-1]
 gi|326659770|gb|EGE44616.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces cf.
           griseus XylebKG-1]
          Length = 413

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 197/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  R
Sbjct: 25  LEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLIEEVRQAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV+   
Sbjct: 85  KVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLADDAEITTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LTALREGGFNRVSFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 205 GESDDDWRATLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEIPMTDDDAHADRYLIAD 264

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +A G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EAFAAAGFHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +       +E L+ E +  E +++ LRLREG  +   ++L    L     
Sbjct: 321 HPGAYAQALAEGRSPGAGREILAEEDRRVERILLELRLREGCPL---DLLKPDGL--AAS 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G +    + R R   T RG  + D+V+ +L
Sbjct: 376 RRALADGLLAPEPYDRGRAVLTLRGRLLADAVVRDL 411


>gi|254515825|ref|ZP_05127885.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
 gi|219675547|gb|EED31913.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
          Length = 375

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 201/384 (52%), Gaps = 29/384 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           LG+Y+H P+C +KCPYCDFNSH  R        +  I+  L E +  R     R I ++F
Sbjct: 6   LGLYIHIPWCERKCPYCDFNSHETRDIPESAYTDALIEDLLQETRDRR-----REIQTVF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL   + I  ++D + ++  ++ + E+T+EANP SVE    QGY +AG+ R SL
Sbjct: 61  IGGGTPSLFSVEAITRLMDAV-RSAGLAEDAEVTMEANPGSVETARLQGYARAGITRFSL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           G+QS ++  L+ LGR H++  A  A   AR+   R  + DL++ LP+Q++ Q   +++ A
Sbjct: 120 GIQSFDDACLKSLGRIHDSDMARRATAAARSCGARSYNIDLMHGLPEQSLDQGLADIRSA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+    H+S YQLTIE  T FY         LP+E +   L      + +A G   YE+S
Sbjct: 180 LALKPPHVSWYQLTIEPNTRFYSNPPQ----LPAEAILGTLEEEGARLLTAAGYERYEVS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGH 313
             +  G    HNLNYWR+GDY+ IG GAH ++   +  +   S  + PE +L        
Sbjct: 236 AWAQPGQACQHNLNYWRFGDYLAIGAGAHGKLSAENGDIFRYSKTRQPEDYLAAGGIERR 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM------LAGRNLDIECERNLQRQGF 367
           AV    +L    +  EF++  LRL  G S   W++      L GR +     + L  QG 
Sbjct: 296 AV---RWLDESDRRGEFMLNALRLSAGFS---WDLFESRTGLDGRQISATVTQ-LVDQGL 348

Query: 368 IERVQFSRLRCTQRGMTMLDSVIA 391
           + + Q  ++  T  G   LD V+ 
Sbjct: 349 LSQQQ-DQISTTDLGRRFLDDVVG 371


>gi|332975779|gb|EGK12660.1| coproporphyrinogen dehydrogenase [Desmospora sp. 8437]
          Length = 381

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 198/379 (52%), Gaps = 18/379 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           VY+H PFC  KC YCDF ++V    VG    ++++ +   EM    +   P  I +IF G
Sbjct: 6   VYIHIPFCAHKCHYCDFTAYV----VGGQPVDDYLDALEREMARTVEEIPPGKIETIFIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+++ P+ +  +L  + + + V S  +E T+EANP + E       ++ GVNR+S G
Sbjct: 62  GGTPTVLAPRQMERLLKDVRRYFPVWSDRLEFTVEANPGTTEPEKLAVLKEGGVNRLSFG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            Q+     L  +GR+H   E   ++  AR      +S DL++ LP+Q++T  E  L R L
Sbjct: 122 AQTFRPDLLAEIGRDHGVDEIAGSVETAREAGIDNVSLDLMFGLPRQSVTDMEEALVRGL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   DH S+Y L +E+GT+F+     G L LPSE+  +++Y LT+      G   YE+SN
Sbjct: 182 ALGPDHFSVYSLKVEEGTVFHHKMLQGKLPLPSEDDELEMYLLTRRRLEEAGYLQYEVSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S  G ES HN  YW    Y G+G GAH   +   H     + +    ++++ R     +
Sbjct: 242 FSRPGRESRHNSTYWLNEPYYGLGAGAHGYAQGVRHENVRGVGE----YIRLSRSR-RPI 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
                +S+ +  +   ++GLRLR+G+S + +  L G+  +        +LQ++  I R +
Sbjct: 297 AATHRVSAAEAMENHFILGLRLRDGVSQRGFAQLYGKPPETVFGSVLEDLQKRRLIRR-E 355

Query: 373 FSRLRCTQRGMTMLDSVIA 391
             R + T++G+   + V A
Sbjct: 356 GDRYQLTEQGLLFGNDVFA 374


>gi|224370374|ref|YP_002604538.1| HemN2 [Desulfobacterium autotrophicum HRM2]
 gi|223693091|gb|ACN16374.1| HemN2 [Desulfobacterium autotrophicum HRM2]
          Length = 382

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 201/395 (50%), Gaps = 42/395 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           S+   +YVH PFCV+KC YCDF S +    + +  F+++ L+E+   +     R+I  +I
Sbjct: 2   SDVTAIYVHVPFCVRKCAYCDFYS-IDDLSL-KRAFVKALLSEIAMCKD---RRAIVDTI 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+ P  I  IL  I +N+TVS   E T+E NP +V  + F   + +G+NR++
Sbjct: 57  YFGGGTPSLLLPGQIQEILTAIGENFTVSKGCETTLEVNPGTVNADYFGKIQDSGINRLN 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS +++ L F+GR H+A+ A  A+  AR+  F  +  DLIY LP  T   W  +L  
Sbjct: 117 IGVQSFDDERLDFMGRIHSAAVARQALQQARDTGFDNLGLDLIYGLPGDTEGAWVKDLDS 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL +  +HLS Y LT E GT  +++ + G +    +     L+ LT +    HG   YEI
Sbjct: 177 ALVFQPEHLSCYMLTYEPGTPMHRLVEQGAITPLDDGSVAGLFKLTSTFLEGHGYLHYEI 236

Query: 254 SNHSF-LGAESLHNLNYWRYGDYIGIGPGAHS---------RVKVGSHRVAISIEKHPES 303
           SN +  +  +S HN  YW +  Y+G GP AHS            V  +   +   + P  
Sbjct: 237 SNFAAGVSFQSRHNQKYWNHAPYLGFGPSAHSFENGTRFWNHADVCRYTSDLGAGRLP-- 294

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDI 356
                      V E E L+++Q   E +M+GLR   G+ +  ++ ++ +        +  
Sbjct: 295 -----------VAETETLANDQILMEMIMLGLRTSMGVDLTKFDCISNQGFLKMFDAVVT 343

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           +CE          RV   R   T  G   LD++++
Sbjct: 344 DCEAKAW-----GRVVNQRFFLTLDGRLFLDTIVS 373


>gi|300858954|ref|YP_003783937.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686408|gb|ADK29330.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206654|gb|ADL10996.1| Oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis C231]
 gi|308276897|gb|ADO26796.1| oxygen-independent Coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis I19]
          Length = 384

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 198/390 (50%), Gaps = 18/390 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGP-- 68
           Q S   GVY+H PFC  +C YCDFN++           E+++ +   E+    Q+     
Sbjct: 3   QKSTPFGVYIHVPFCSSRCGYCDFNTYTPGELGSSASPESYLNALEIELDLAAQIRASSG 62

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  S++F GGGTPS++    +  +L  +  +  ++   E+T E+NP S     F    
Sbjct: 63  DTREASTVFVGGGTPSMLGAAGLDRVLLAVRSSTGIAPGAEVTTESNPESTSPEFFHSLL 122

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           ++G  R+SLG+QS     L+ L R H    A AA   A    F  ++ D+IY  P +T  
Sbjct: 123 ESGFTRVSLGMQSASSSVLKVLERKHTPGRAFAAAKEALAAGFNHVNLDMIYGTPTETNE 182

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                L R +   VDH+S Y L +E GT   +  + G+L  P E+   D Y +       
Sbjct: 183 DVRETLSRVVDTGVDHVSAYSLIVEDGTAMARKVRRGELPPPDEDTYADRYWMIDQALRQ 242

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G E  HN+ YWR GD+ G GPGAHS +   + R   +I KHP S+ 
Sbjct: 243 EGFSWYEVSNWAREGGECQHNMGYWRDGDWWGAGPGAHSHI---AQRRFHNI-KHPASYS 298

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           K +      V E+E LS  ++ +E +M+GLRL+EG+S+   E  AG  LD+   R   +Q
Sbjct: 299 KALLAGELPVKEEETLSDVERHEEKVMLGLRLKEGVSIA--EFSAG-ELDVIESR--VKQ 353

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G +  +   R+R T++   + D +IA++ V
Sbjct: 354 GLL-HMNAGRVRLTEKSRLLADGIIADILV 382


>gi|302331204|gb|ADL21398.1| Coproporphyrinogen III oxidase [Corynebacterium pseudotuberculosis
           1002]
          Length = 384

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 198/390 (50%), Gaps = 18/390 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGP-- 68
           Q S   GVY+H PFC  +C YCDFN++           E+++ +   E+    Q+     
Sbjct: 3   QKSTPFGVYIHVPFCSSRCGYCDFNTYTPGELGSSASPESYLNALEIELDLAAQIRASSG 62

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  S++F GGGTPS++    +  +L  +  +  ++   E+T E+NP S     F    
Sbjct: 63  DTREASTVFVGGGTPSMLGAAGLDRVLLAVRSSTGIAPGAEVTTESNPESTSPEFFHSLL 122

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           ++G  R+SLG+QS     L+ L R H    A AA   A    F  ++ D+IY  P +T  
Sbjct: 123 ESGFTRVSLGMQSASSSVLKVLERKHTPGRAFAAAKEALAAGFNHVNLDMIYGTPTETNE 182

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                L R +   VDH+S Y L +E GT   +  + G+L  P E+   D Y +       
Sbjct: 183 DVRETLSRVVDTGVDHVSAYSLIVEDGTAMARKVRRGELPPPDEDTYADRYWMIDQALRQ 242

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G E  HN+ YWR GD+ G GPGAHS +   + R   +I KHP S+ 
Sbjct: 243 EGFSWYEVSNWAREGGECQHNMGYWRDGDWWGAGPGAHSHI---AQRRFHNI-KHPASYS 298

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           K +      V E+E LS  ++ +E +M+GLRL+EG+S+   E  AG  LD+   R   +Q
Sbjct: 299 KALLAGELPVKEEETLSDVERHEEKVMLGLRLKEGVSIA--EFSAG-ELDVIEPR--VKQ 353

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G +  +   R+R T++   + D +IA++ V
Sbjct: 354 GLL-HMNAGRVRLTEKSRLLADGIIADILV 382


>gi|213965780|ref|ZP_03393972.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium amycolatum SK46]
 gi|213951539|gb|EEB62929.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium amycolatum SK46]
          Length = 387

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 200/388 (51%), Gaps = 20/388 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGP---R 69
           ++S GVY+H PFC  +C YCDFN++          Q +++ + + E++ M  +  P   R
Sbjct: 8   TDSFGVYLHVPFCATRCGYCDFNTYTPGQLGSGATQGDYLDAIVAELE-MAVVKHPELAR 66

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++F GGGTPS++    +  +LDG+  ++ ++ + E+T E+NP S     F+G  +AG
Sbjct: 67  GADTVFVGGGTPSMLGASGLRRLLDGVRNSFGLADDAEVTTESNPESTSPEFFEGLAEAG 126

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             R+SLG+QS     L  L R H      AA+  AR   F  ++ D+IY  P ++M   +
Sbjct: 127 FTRVSLGMQSAVPHVLTTLDRTHTPGRPAAAVAEARAAGFEHINLDVIYGTPGESMADLD 186

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L+  L+  VDH+S Y L +E GT   +  + G+L +P ++   D Y    +  S  G 
Sbjct: 187 TTLEAVLATEVDHVSAYSLIVEPGTAMARKVRRGELPMPDDDDLADRYERIDAALSQAGF 246

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN +  G +  HN+ YWR G++ G GPGAHS +       A    KHP  +   +
Sbjct: 247 SWYEVSNWAKPGGQCRHNMIYWRDGNWWGAGPGAHSHLDGTRFYNA----KHPARYAATI 302

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
                 + + E L++E +  E +M+GLRL EGI       L G + ++   R     G +
Sbjct: 303 SGGELPIKDSEELTAEDRHTEKIMLGLRLAEGIDAN----LLGED-ELGKARRQAEAGMV 357

Query: 369 ERVQFS---RLRCTQRGMTMLDSVIANL 393
           E V      R++ T RG  + D++I ++
Sbjct: 358 EFVSVDGGQRIQLTNRGRLLADAIIVDI 385


>gi|78355583|ref|YP_387032.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78217988|gb|ABB37337.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 578

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 198/384 (51%), Gaps = 21/384 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC F+S         G + ++ + L E+       G R++ ++FFGG
Sbjct: 187 LYIHVPFCRSKCGYCAFHSVPVAAAGPDGMQQYLDALLREIALWGDRLGNRAVHTVFFGG 246

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGVNRISLGV 137
           GTPSL+  + +A+I+D + + + + +  EI+ EANP SV    +     K G+NR+SLGV
Sbjct: 247 GTPSLLPEKAVAVIMDRLRRAFDIQNGAEISFEANPESVSAYGYLDTLFKCGINRLSLGV 306

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL    LR LGR H A EA+ A  LAR   F  ++ D+I+ LP Q +  W  EL+    
Sbjct: 307 QSLNNDGLRVLGRPHKAREAVNAFRLARQAGFGNINLDMIWGLPSQRLKLWLDELKAVTE 366

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DHLS Y LT+E+GT   +    G   LP E     ++        + G   YEISN 
Sbjct: 367 LKPDHLSCYGLTLEEGTPLEQACLQGRHTLPDEQEQARMFIYGAEFLESRGYMQYEISNF 426

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK--HPESWLKMVRKNGHA 314
           + +G +  HNL YW   +Y+G+GP A S          +S  +  +P    +  R+    
Sbjct: 427 ARMGFQCRHNLGYWEGAEYLGMGPSAVS---------TLSGRRWENPHGLQEYARRTAEG 477

Query: 315 VV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIE 369
            +  +   L+  ++A+E +M+ LR   G+ VK +  L GR+   E ++    L R   + 
Sbjct: 478 TLGHDAAALTPLERAEELIMLRLRTARGLRVKAYRDLTGRDFLREHKQLVHALHRNRLV- 536

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           R+    LR T+ GM + ++++ N+
Sbjct: 537 RISNGYLRLTRNGMLVSNTILENI 560


>gi|186681618|ref|YP_001864814.1| coproporphyrinogen III oxidase [Nostoc punctiforme PCC 73102]
 gi|186464070|gb|ACC79871.1| putative oxygen-independent coproporphyrinogen III oxidase [Nostoc
           punctiforme PCC 73102]
          Length = 393

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 203/383 (53%), Gaps = 20/383 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSISSIF 75
           YVH PFC ++C YCDF   V   ++  E       +++    E+        P  + +IF
Sbjct: 15  YVHIPFCRRRCFYCDFPVSVVGDRLRGETSDTISQYVEVLCKEIAITPAFGQP--LKTIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + +  I+  + K++ ++S  EI++E +P + ++ +  GYR AGVNR+SL
Sbjct: 73  FGGGTPSLLSTEQLQRIVGELEKHFGIASGAEISMEIDPGTFDLAHIAGYRSAGVNRVSL 132

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +E+ L+  GR+H+  +  AA+ L   +  P  S DLI  LP Q++ QW+  L +A
Sbjct: 133 GVQAFQEELLQRAGRSHSVEDIFAAVELIHQVEIPAFSLDLISGLPHQSLDQWQNSLTKA 192

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    H+S+Y LTIE GT F + +K GD  LP++   V +Y + Q   +  G   YEIS
Sbjct: 193 VALLPTHISIYDLTIEPGTAFGRYYKPGDTPLPTDEATVKMYQMGQQALTGAGYEHYEIS 252

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++    +  HN  YW    Y G G GA S V+ G      +  +    + + V+  G  
Sbjct: 253 NYAQPKHQCRHNRVYWENRPYYGFGMGAASYVE-GKR---FTRPRKTREYYQWVQAGG-- 306

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           V++ +    ++   E LM+GLRL EG+S+       G     E  R LQ    +G++E V
Sbjct: 307 VIDCDVTPPKEVLLETLMLGLRLAEGLSLAALVEAFGEEKVEEICRCLQGYFDKGWVE-V 365

Query: 372 QFSRLRCTQ-RGMTMLDSVIANL 393
              RLR    +G    + V+A L
Sbjct: 366 TEGRLRLIDPQGFLFSNVVLAQL 388


>gi|317122992|ref|YP_004102995.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           marianensis DSM 12885]
 gi|315592972|gb|ADU52268.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           marianensis DSM 12885]
          Length = 431

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 206/377 (54%), Gaps = 13/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGG 79
           +YVH P+C ++C YCDFN+++   + G+  ++ +   E+  +    G  R + S++ GGG
Sbjct: 55  LYVHVPYCRQRCYYCDFNTYLLDPE-GKARYLAALQRELALLATDPGLTRPLVSVYVGGG 113

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++EP  +  +L  + +++ ++ + EIT+E NP +++       R  GV R+SLG+Q+
Sbjct: 114 TPSILEPAELERLLGAVHRHFCLAPDAEITVECNPGTLDEGRLAALRDGGVTRLSLGLQA 173

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++++ LR +GR+H  ++  A     R   F  ++ DLI+ LP QT+ QWE  L+  +   
Sbjct: 174 VQDELLRAMGRDHTWADFCATYRRVRQAGFDNVNIDLIFGLPGQTLDQWEASLRAVVDLD 233

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L +  GT F++  + G+LVLP E+    +++L      A G   YEISN + 
Sbjct: 234 PEHVSCYGLELHPGTPFHRWWEAGELVLPGEDAERAMFDLAYERLGAAGFVRYEISNFAR 293

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HN  YW  G Y+G GPGA S  +    R  +    HP ++   + ++   V  +
Sbjct: 294 PGRESVHNRVYWLNGSYLGAGPGAWSCWRGERRRNRL----HPAAYAAELAEDRLPVDVR 349

Query: 319 EFLSSEQQADEFLMMGLRLREGIS----VKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           E +   +  +E +++GLRL EG+      + + +           R L  +G++ R +  
Sbjct: 350 EPVDRRRAMEETMILGLRLAEGVDEARFARRFGLTPAEAFPAAVARLLD-EGWLVR-EGG 407

Query: 375 RLRCTQRGMTMLDSVIA 391
           RLR +   + + +SV+A
Sbjct: 408 RLRLSPGAVPVANSVLA 424


>gi|251796214|ref|YP_003010945.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. JDR-2]
 gi|247543840|gb|ACT00859.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. JDR-2]
          Length = 392

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 188/360 (52%), Gaps = 17/360 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +Y+H PFC  KC YCDF S+V +   GQ  + ++ +   EM        P  I ++F G
Sbjct: 8   ALYIHIPFCTNKCHYCDFTSYVLK---GQPVDEYLDALEREMALTVAQMPPERIDTVFVG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  +   L  + K + ++ +VE T+EANP + +          GVNRIS GV
Sbjct: 65  GGTPTVLTPPQMERFLTSVKKYFPLADDVEFTMEANPGTTDPEKLAAMFAGGVNRISFGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  +GR HN  +   ++  AR   F  +S DL++ LPKQT+   E  + +AL+
Sbjct: 125 QSFDNGLLERIGRIHNVDDVYRSLENARAAGFTNLSIDLMFGLPKQTVEMLEDSVNKALA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H SLY L +E+ TLF+K+++  +L LP E+   ++Y L        G   YEISN 
Sbjct: 185 LDLPHYSLYSLKVEENTLFHKLYQRDELPLPPEDEEFNMYTLLMDRLKQAGYVHYEISNF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE-SWLKMVRKNGHAV 315
           +  G ES HN  YWR   Y G+G GAH   +   H     ++   + +  K+ R   + V
Sbjct: 245 AKPGYESRHNSTYWRNEPYYGLGAGAHGYARGLRHVNVKGVQPFIDYTKTKLPRLEENVV 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECE---RNLQRQGFIERV 371
            E E +      ++F+M+GLRL +G+   D+     G+ L+ +       L + G +E+V
Sbjct: 305 PEYEAM------EDFMMVGLRLLKGVRTSDYAAQFEGQKLEDKFGPIIEKLLKDGLLEKV 358


>gi|332971477|gb|EGK10429.1| oxygen-independent coproporphyrinogen III oxidase [Psychrobacter
           sp. 1501(2011)]
          Length = 407

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 217/404 (53%), Gaps = 44/404 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-----------RRYKVGQENF---IQSFLTEMQWMRQ 64
           L +Y+H P+CVKKCPYCDFNSH                +  ++F   + + + ++     
Sbjct: 12  LALYIHIPWCVKKCPYCDFNSHTLPNNDSQSLTQTGTTIADDHFTVYVDALIKDIDSQLS 71

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R I+SIF GGGTPSL+  +    +   +     ++ ++E+T+EANP ++E   F+ 
Sbjct: 72  LIQGREITSIFIGGGTPSLLPIEQYQRLFSHLKSVLPLAKDLEVTMEANPGTLEHAPFEE 131

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y K G+NR+S+GVQS  +  L+ LGR HNA++A  A   A+   F R++ DL++ LP Q 
Sbjct: 132 YLKVGINRLSMGVQSFSDSKLKALGRIHNANQAQLATQAAKKAGFKRVNIDLMHGLPNQN 191

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +   ++++A      H+S YQLTIE  T+FY+       VLP +N   D+     ++ 
Sbjct: 192 LAEALTDIEQAHHAGATHISWYQLTIEPNTVFYR----NTPVLPDDNDLADIEEQGSALL 247

Query: 244 SAHGLHAYEISNHSFLGAESL---HNLNYWRYGDYIGIGPGAHSRVKV-----------G 289
           +  G   YE+S  +++GA+ +   HN+NYW++GDY+ IG GAH ++ +           G
Sbjct: 248 TQLGYQNYEVS--AWVGAQDIPCRHNVNYWQFGDYLAIGAGAHGKITLADDSSYPGFNSG 305

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            +R   S  + P+ +  M  ++   +V    +++E  + EF+M  LRL  G+ +  + + 
Sbjct: 306 IYR--FSKTRLPKDY--MSYRDFPKMVGFSAIATEDLSGEFMMNALRLSSGVPLSLYSVR 361

Query: 350 AGRNLD--IECERNLQRQG-FIERVQFSRLRCTQRGMTMLDSVI 390
            G   +  +   + LQ+QG  ++  +F  ++ T  G   L+ V+
Sbjct: 362 TGLATEQIMPIIKRLQQQGLLVDNEEF--IQPTALGQRYLNQVV 403


>gi|303238640|ref|ZP_07325173.1| oxygen-independent coproporphyrinogen III oxidase [Acetivibrio
           cellulolyticus CD2]
 gi|302593759|gb|EFL63474.1| oxygen-independent coproporphyrinogen III oxidase [Acetivibrio
           cellulolyticus CD2]
          Length = 380

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 187/337 (55%), Gaps = 10/337 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S+G+Y+H PFC  KC YCDFNS   R ++    F  +   E+    +     +I ++F G
Sbjct: 6   SIGIYIHIPFCRAKCFYCDFNSFACRDELVPAYF-NALKKEISLYAEKLKGYNIKTVFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+++ Q I  I+  + +   +    EI+IE NP ++ +   Q Y++ GVNR+S+G+
Sbjct: 65  GGTPSVVDAQYIYEIMSLLNQKLDIDKKAEISIETNPGTLNLEKLQIYKEIGVNRLSIGL 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +++ L+ LGR H A E      LAR + F  ++ DLI+ +P Q+   W   L+    
Sbjct: 125 QAWQDRILKMLGRIHTAKEFEDNFKLARQVGFDNINVDLIFGIPDQSFEDWCETLKSVTE 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L IE+GT+F    ++G+L    +++   +Y+ T+   +  G   YEISN 
Sbjct: 185 LGPEHMSCYSLKIEEGTIFGSRLENGELEPLDDDIDRKMYSYTKDYLAKKGYKHYEISNF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL--KMVRKNGHA 314
           +  G E  HNL YW   +YIGIG G+HS  +         IE +  S L  K+  +N  +
Sbjct: 245 AKPGYECRHNLVYWDVEEYIGIGAGSHSFFESTRFNNVYDIESYISSILGEKIPSENAES 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           + +KE ++      EF+++GLRL +G+ V+D++   G
Sbjct: 305 INKKESMA------EFMILGLRLIDGVRVEDFKSRFG 335


>gi|302551342|ref|ZP_07303684.1| coproporphyrinogen III oxidase [Streptomyces viridochromogenes DSM
           40736]
 gi|302468960|gb|EFL32053.1| coproporphyrinogen III oxidase [Streptomyces viridochromogenes DSM
           40736]
          Length = 429

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 199/396 (50%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++  R
Sbjct: 41  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYAETLVEEVRLAR 100

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L++  ++  +L  I   + ++ + E+T EANP SV    
Sbjct: 101 KVLGDDPRPVRTVFVGGGTPTLLDAGDLVRMLGAIRDEFGLAPDAEVTTEANPESVGPAY 160

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NRIS G+QS  +  L+ L R H        +  AR   F  ++ DLIY  P
Sbjct: 161 LAALREGGFNRISFGMQSARQHVLKVLDRTHTPGRPERCVAEARAAGFEHVNLDLIYGTP 220

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 221 GESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 280

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 281 EMLSAAGFEWYEVSNWATSQAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNVK 336

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E LS E +  E +++ LRLREG+ +    +L  R   +   
Sbjct: 337 HPGAYAAALAAGRSPGAGREVLSEEDRRVERILLELRLREGVPLS---LL--REEGLAAS 391

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R    +G +E   ++  R   T RG  + D V+ +L
Sbjct: 392 RRALSEGLLETGPYAEGRAVLTLRGRLLADGVVRDL 427


>gi|182438782|ref|YP_001826501.1| coproporphyrinogen III oxidase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467298|dbj|BAG21818.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 410

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  R
Sbjct: 22  LEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLIEEVRQAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV+   
Sbjct: 82  KVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLADDAEITTEANPESVDPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 142 LTALREGGFNRVSFGMQSARQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 202 GESDDDWRATLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEIPMTDDDAHADRYLIAD 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +A G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 EAFAAAGFHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +       +E L+ E +  E +++ LRLREG  +   ++L    L     
Sbjct: 318 HPGAYAQALAEGRSPGAGREILAEEDRRVERILLELRLREGCPL---DLLKPDGL--AAS 372

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G +    + R R   T RG  + D+V+ +L
Sbjct: 373 RRALADGLLAPEPYDRGRAVLTLRGRLLADAVVRDL 408


>gi|269956986|ref|YP_003326775.1| oxygen-independent coproporphyrinogen III oxidase [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305667|gb|ACZ31217.1| oxygen-independent coproporphyrinogen III oxidase [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 448

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 187/407 (45%), Gaps = 32/407 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGP-----RS 70
            GVYVH PFC  +C YCDFN++      G   Q ++  + L E+    ++ G      R 
Sbjct: 40  FGVYVHVPFCSVRCGYCDFNTYTASELGGGASQHSYATTALREVALAAKVLGTSGIRQRP 99

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S++FFGGGTP+++   ++  IL G+   W ++ + E+T EANP SV   +    R  G 
Sbjct: 100 VSTVFFGGGTPTMLPASHLVRILAGVRDAWGLAKDAEVTTEANPDSVTPESLAELRAGGF 159

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            R+S G+QS     L  L R H+       +  AR+    +S DLIY  P +++  W   
Sbjct: 160 TRVSFGMQSAVPSVLATLERTHDPRRIPDVVRWARDAGLDVSLDLIYGTPGESLDDWRTS 219

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A++  VDH+S Y L +E GT      + G L  P E+     Y L  ++ +  GL  
Sbjct: 220 LETAIATGVDHVSAYALVVEPGTKMGAQVRRGLLPTPDEDDQATKYELADALLTEAGLGW 279

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE------------ 298
           YE+SN S LG E  HNL YWR  D+ GIGPGAHS +        +               
Sbjct: 280 YEVSNWSRLGHECRHNLAYWRGDDWWGIGPGAHSYIAAPPADSPVVEPPPVVEPVETTPA 339

Query: 299 ----------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                     KHP  +  ++         +E L+ +    E +M+ +RLREG+ +     
Sbjct: 340 PPAGVRWWNVKHPRRYAALLEAGTTPAAARELLTHDDGQLERVMLQIRLREGLPLDALTP 399

Query: 349 LAGRNLDIECERNL--QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            A R +     + L   R          R   T RG  + D+V+  L
Sbjct: 400 SARRAVGTLVGQGLLDGRAALGSDGTQRRALLTLRGRLLADAVVRAL 446


>gi|189501160|ref|YP_001960630.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides BS1]
 gi|189496601|gb|ACE05149.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides BS1]
          Length = 384

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 198/382 (51%), Gaps = 19/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPR--SISSI 74
           L  YVH PFC K+C YCDF      + V +E+  + F + +  +   +L   R  +  SI
Sbjct: 3   LHCYVHIPFCRKRCGYCDF------FLVTKEDLQERFFSALYEETAERLAALRGSTFHSI 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTPSL+    +   L+ + +  ++S + EITIEANP  + ++  +     GVNR+S
Sbjct: 57  HFGGGTPSLVSVSYLERWLETVFRYVSLSDDAEITIEANPEDLTIDKLRDLASLGVNRLS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQS   + L  LGR H A +A      A N+F  +S DLI     +++ +W+ +L  A
Sbjct: 117 IGVQSFLPEKLLALGRCHTAPDAFRVTGEAMNLFDNVSVDLICGAEGESLGEWQRDLDCA 176

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            S  V H+S+Y LT EK TL ++  K G + LP E V   LY+   ++    G   YE+S
Sbjct: 177 ASSGVPHVSVYMLTPEKNTLLFRRLKKGQVTLPGEAVQAALYDAACAMLGDRGFEHYEVS 236

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G  S +NL  W+   Y+G GP AHS +  G+  V      +  S ++ +   G A
Sbjct: 237 NFSKPGFFSRYNLGCWQRESYLGFGPSAHSFLVSGTDEVR---SANVSSLIRYMASPGKA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKD---WEMLAGRNLDIECERNLQRQGFIERV 371
              +E LS E+Q DE + + LRL  G+ + D   +   +   L I  ER L+ QG +E +
Sbjct: 294 QASREVLSPEEQIDEKIFLSLRLSSGLELDDLLHYHKNSSEVLAI-VER-LKEQGLLEIL 351

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
               ++ +++G    D V   L
Sbjct: 352 D-GAIKVSRKGFLFADKVAEEL 372


>gi|283458054|ref|YP_003362665.1| coproporphyrinogen III oxidase [Rothia mucilaginosa DY-18]
 gi|283134080|dbj|BAI64845.1| coproporphyrinogen III oxidase [Rothia mucilaginosa DY-18]
          Length = 428

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 15/351 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQL 65
            +  G  +    +YVH PFC  +C YCDFN++        +G   +    + E+ +  + 
Sbjct: 19  TSAAGCETRDFSLYVHIPFCSVRCGYCDFNTYATEDFGNGIGLGTYADDAIAEILFAART 78

Query: 66  -----TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                   R + ++FFGGGTP+ +  +++  IL      + +    E+T EANP SV   
Sbjct: 79  LETSGVAKRPMRTVFFGGGTPTKLPARDLVRILQAAIDVFGLVEGAEVTTEANPDSVTRE 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           + Q  +  G  R+S G+QS+  + L+ L R H  S     +  A+ +  ++S DLIY  P
Sbjct: 139 DLQTLKDGGFTRVSFGMQSVVPEVLQVLDRTHTPSNVPKVVAWAKEVGLQVSVDLIYGSP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +++ QWE  ++ A+SY  DH+S Y L +E GT      + G+  +P E++  D+Y L +
Sbjct: 199 GESLQQWERSVRAAISYEPDHISAYSLIVEDGTKLAAQIRRGEYTMPDEDLMADMYLLAE 258

Query: 241 SITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G + YE+SN+S      S HNL YWR  D+ GIGPGAHS V  G+    +   K
Sbjct: 259 ELLTEAGYNWYEVSNYSRSEDTRSDHNLAYWRNQDWWGIGPGAHSHVN-GTRWWNV---K 314

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           HP  + + VR        +E L +  +A E +M+ +R+REG++++  E+LA
Sbjct: 315 HPVPYAQKVRAGESPAAAREVLDTATRAFETIMLMIRVREGLAMR--ELLA 363


>gi|15894561|ref|NP_347910.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum ATCC
           824]
 gi|15024207|gb|AAK79250.1|AE007640_5 Coproporphyrinogen III oxidase [Clostridium acetobutylicum ATCC
           824]
 gi|325508693|gb|ADZ20329.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum EA 2018]
          Length = 374

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 214/383 (55%), Gaps = 18/383 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           N LG+Y+H PFC  KC YCDF S+  +  Y +    + ++  TE++   + +  +  SSI
Sbjct: 2   NKLGLYIHIPFCKSKCLYCDFPSYACIEDYMIP---YAKALCTEIE---KASINKVFSSI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS +  + + ++ D + K    + +VE T+E NP+S        ++  GVNR+S
Sbjct: 56  FIGGGTPSFLSIEALNILCDALKK-VRKTKDVEFTVEGNPNSFTEKKLMVFKDMGVNRLS 114

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+Q+ +++ L+ LGR H   E   A   ARN+ F  ++ DL++ +P QT+  ++  L+ 
Sbjct: 115 IGLQACQDRLLKKLGRIHTLKEFTVAFKRARNLGFNNINVDLMFGIPDQTLEDFKESLEF 174

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +H+S Y L +E+GT ++KM++ G L LP+E+   D+Y+  ++     G + YEI
Sbjct: 175 ITKLKPEHISSYSLIVEEGTPYFKMNEGGKLKLPNEDEERDMYSFARTFLEEKGYNQYEI 234

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +    E  HNL YW   +YIG G  AHS      +R   +++K+ E   K     G+
Sbjct: 235 SNFAVKDKECRHNLIYWELDNYIGCGASAHSYFNGVRYRNINNVKKYIEQISK-----GN 289

Query: 314 AVVEKEFLS-SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
           +VVE+   +  ++  +EF+ +GLR   G+S++++++   +++       +++   I  + 
Sbjct: 290 SVVEENHRNLLKEDMEEFMFLGLRKTRGVSIEEFKLKFNKDIQEVYGDVIKKYETIGMII 349

Query: 373 FS--RLRCTQRGMTMLDSVIANL 393
            +  R+  T+RGM + +S++ + 
Sbjct: 350 LNEHRVFLTERGMQISNSIMCDF 372


>gi|169343519|ref|ZP_02864518.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens C str. JGS1495]
 gi|169298079|gb|EDS80169.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens C str. JGS1495]
          Length = 377

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 190/339 (56%), Gaps = 7/339 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF G
Sbjct: 3   KISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIISLREKHNNLEINTIFIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G+
Sbjct: 62  GGTPSVLEADELECLLKEVAK-LNMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMGL 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +S
Sbjct: 121 QAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINIDLMFGLPNQRLNEWEETLREIIS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN+
Sbjct: 181 LEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW   ++IG+G  A S +     +   S+E++  S    + + G AV 
Sbjct: 241 AKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEEYINS----INEKGEAVE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           E    S     +EF+ MGLR   GI   +++     N++
Sbjct: 297 EIITNSKNDNMEEFMFMGLRKINGIDENEFKKRFSMNIN 335


>gi|317128297|ref|YP_004094579.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473245|gb|ADU29848.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           cellulosilyticus DSM 2522]
          Length = 380

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 186/332 (56%), Gaps = 6/332 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++  VYVH PFC + C YCDFN    + +   E ++     E++   ++    +ISSI+ 
Sbjct: 2   DTKAVYVHVPFCEQICHYCDFNKFFLKNQPVDE-YLSLCDQEIKNTVKVHPNHAISSIYV 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +    ++ +L  I +N+    NVE T+E NP SV+    +  R+ GVNR+S+G
Sbjct: 61  GGGTPTSLTTLQLSKLLSSIKENFYTDRNVEWTVEVNPGSVDQEKLEMMREYGVNRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            Q+  E  L+ +GR+H   +    I LAR + F  +S D+++ LPKQT  Q+E  L    
Sbjct: 121 AQTFHEDLLKKIGRDHQREDVFHTIELARKVGFHNLSIDIMFGLPKQTEEQFEETLNILT 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              ++H+S Y L +E+ T+FY++   G L LP E++   +Y L +     +  + YEISN
Sbjct: 181 RLPIEHISAYSLKVEERTVFYQLWNKGKLSLPGEDIEAKMYELLREKMKNNNFNQYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW+   Y GIG GAHS V   +    I+    P+ +++ V++ G   
Sbjct: 241 FAKNGYESSHNLTYWKNEPYFGIGAGAHSYV---AQVRRINHGPLPK-YMEAVKETGFPY 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E+  +S ++Q +E + MGLR   G+  +D++
Sbjct: 297 REEHPVSRKEQMEEEMFMGLRKLAGVRHQDFQ 328


>gi|223932512|ref|ZP_03624513.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis 89/1591]
 gi|302024145|ref|ZP_07249356.1| coproporphyrinogen III oxidase [Streptococcus suis 05HAS68]
 gi|330833092|ref|YP_004401917.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis ST3]
 gi|223898783|gb|EEF65143.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis 89/1591]
 gi|329307315|gb|AEB81731.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis ST3]
          Length = 375

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 206/373 (55%), Gaps = 14/373 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC + C YCDF+    + +   E ++ + + E+++        ++ +++ GGGT
Sbjct: 8   AYIHIPFCTQICYYCDFSKVFIKNQPVDE-YLAALMEEVKFY----DLPALRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +    +  +L  +     +S   E TIEANP  +  +     +K+  NR+SLGVQ+ 
Sbjct: 63  PSALSADQLDYLLTNLEDLLDLSQLEEFTIEANPGDLTADKIAVLKKSKCNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++ L+ +GR+HN ++    I   +   F  +S DLIYALP QTM Q    + +AL   +
Sbjct: 123 DDRMLKKIGRSHNQAQIYETIATLKEAGFYNISIDLIYALPGQTMEQVVDNVAKALELDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G+L LP+E+V  D+++        +G   YEISN +  
Sbjct: 183 PHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDMFDYILQELEKNGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   +    +R    I    + +LK +R+ GH+ + +E
Sbjct: 243 GFESRHNLMYWDNSEYYGLGAGASGYIDGMRYRNRGPI----QHYLKSIREKGHSRLHEE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRL 376
           FLS  +Q +E + +GLR + G+S++ +E   G + +    +  R+L+ +G ++  +   L
Sbjct: 299 FLSQTEQMEEEMFLGLRKKTGVSIERFEEKFGISFEDRYGQVVRDLKNEGLLQE-EDRWL 357

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 358 RMTKKGLFLGDTV 370


>gi|295706653|ref|YP_003599728.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium DSM 319]
 gi|294804312|gb|ADF41378.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium DSM 319]
          Length = 379

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 179/341 (52%), Gaps = 16/341 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSISSI 74
             Y+H PFC   C YCDFN      KV  +N     +++S   EM+   +     ++++I
Sbjct: 4   AAYLHIPFCHHICHYCDFN------KVFFKNQPVMPYLESMREEMKQTVERYPTTNLNTI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ ++ Q +   L+ I          E T EANP+ +     Q     GVNR+S
Sbjct: 58  FVGGGTPTALDEQQLEYFLESIRMYLPYDEKGEFTFEANPNELTKEKLQLLHDYGVNRLS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+  E+ L  +GR H+  +    +  AR I    +S DLIY+LP+QT+  +   LQ 
Sbjct: 118 VGVQTFNERLLEKIGRVHSNRQVFECVEQARKIGMSNISLDLIYSLPEQTVADFSSTLQT 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A S  V+H+S Y L IE  T+FY +   G L LP++     +Y L        G H YEI
Sbjct: 178 AFSLEVEHMSAYSLIIEPKTVFYNLMNKGKLPLPAQEEEAAMYELLMKEMDKQGFHQYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES+HNL YW   DY GIG GAHS +  G  R  I   K    ++  V +NG+
Sbjct: 238 SNFAKTGYESIHNLTYWNNDDYYGIGAGAHSYID-GIRRANIGPLK---KYIDSVEQNGN 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           A + +  ++  ++ +E + +GLR  +G+S ++++    R L
Sbjct: 294 AYLNEVSVTEAEKMEEEMFLGLRKTKGVSKEEFKKKFNREL 334


>gi|110801024|ref|YP_696716.1| coproporphyrinogen III oxidase [Clostridium perfringens ATCC 13124]
 gi|110675671|gb|ABG84658.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens ATCC 13124]
          Length = 377

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 191/340 (56%), Gaps = 7/340 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIINLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  IAK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLESNELECLLKEIAK-LNMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+E++  S    + + G AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEEYINS----INEKGEAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E    S     +EF+ MGLR   GI   +++     N++
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKKRFSMNIN 335


>gi|289167566|ref|YP_003445835.1| Coproporphyrinogen III oxidase, oxygen-independent
           coproporphyrinogen III oxidase [Streptococcus mitis B6]
 gi|288907133|emb|CBJ21967.1| Coproporphyrinogen III oxidase, oxygen-independent
           coproporphyrinogen III oxidase [Streptococcus mitis B6]
          Length = 376

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 209/375 (55%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +        + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIQKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSASQLEVLLKGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAV-EEGNARIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           +E LS ++Q +E + +GLR + G+S+  +E   GR  D    E  ++L +QG ++ +   
Sbjct: 296 EEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRPFDGLYGEIVKDLVQQGLMQ-IDGD 354

Query: 375 RLRCTQRGMTMLDSV 389
           R+R T+RG+ + D+V
Sbjct: 355 RVRMTKRGLFLGDTV 369


>gi|168215663|ref|ZP_02641288.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens NCTC 8239]
 gi|182382175|gb|EDT79654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens NCTC 8239]
          Length = 377

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 188/332 (56%), Gaps = 7/332 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAK-LNMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+E++  S    + + G AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEEYINS----INEKGEAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E    S     +EF+ MGLR   GI   +++
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFK 327


>gi|255323729|ref|ZP_05364857.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium tuberculostearicum SK141]
 gi|255299219|gb|EET78508.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium tuberculostearicum SK141]
          Length = 379

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/387 (33%), Positives = 187/387 (48%), Gaps = 20/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SIS 72
           +   G+Y+H PFC  +C YCDFN++         +    +L  +    +L   R      
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDRELELAAARVGRPAE 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+  Q ++ IL+ +   + +    E+T E+NP S     F     AG  R
Sbjct: 62  TVFIGGGTPSLLGGQGLSRILNTVRSTFGLKPGAEVTTESNPESTSPEYFAQLADAGYTR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLG+QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       L
Sbjct: 122 ISLGMQSASPGVLQVLERAHTPGRAFDAAREARAAGFEHVNLDMIYGTPTETDDNVRETL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   + G   Y
Sbjct: 182 DRVLETGVDHVSAYSLIVEDGTRMARKVNKGILPAPDEDVLARRYEMISSTLESEGFEWY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN S  G E  HN  YW  G++ G GPGAHS   +G+ R   ++ KHP  ++  + + 
Sbjct: 242 EVSNWSKPGGECEHNRIYWVDGNWWGAGPGAHS--HLGNERF-FNV-KHPSRYIDTLGRG 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFI 368
              + E E L+   +  E +M+GLRLREGI  + W       LD      L+R   +G +
Sbjct: 298 ELPIKETETLTEADRHMEKIMLGLRLREGIP-EAW-------LDTHAAPALERFIGRGLL 349

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ER    R+R T+ G  + D +I +L V
Sbjct: 350 ERAG-DRVRITKPGRLLADGIITDLLV 375


>gi|167627217|ref|YP_001677717.1| coproporphyrinogen dehydrogenase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597218|gb|ABZ87216.1| Coproporphyrinogen dehydrogenase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 380

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 197/379 (51%), Gaps = 17/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      +++ +  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHAIKNDTYLSQDYYKKLIADFDTHLTDLQDREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   +  +L  I  N  ++ N EIT+E NP +VE  +   Y   G+NRIS+GV
Sbjct: 68  GGTPSLFKADYLGKVLQHIKDNSKLNPNCEITLEMNPGTVERGSISDYANIGINRISVGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQNEKLQLLGRIHNCDNVYTTIEEIKNSRISNFNIDIMHGLPNQSFEDGIFDISQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E     +    + +    G + YEIS +
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKPPK----LPDEETLEQIEITGKKLLQQAGYYQYEISAY 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           +     S+HN NYW +GDYIGIG GAHS++  + +  +  + + KHP    K+  +  + 
Sbjct: 244 AKDNLRSIHNSNYWNFGDYIGIGAGAHSKITNLQTKEIKRTWKHKHP----KIYSQADNF 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           + +   +S +    EF++  LRLR+G S   +E     + D   + NLQ    +G + +V
Sbjct: 300 IKDSNVVSQDDLVYEFMLNTLRLRDGFSFDLFERQTFLSKDT-IQNNLQVAIDRGLL-KV 357

Query: 372 QFSRLRCTQRGMTMLDSVI 390
               ++ T +G   L+  I
Sbjct: 358 NKDNVKPTDKGYLFLNDCI 376


>gi|323490049|ref|ZP_08095270.1| coproporphyrinogen III oxidase [Planococcus donghaensis MPA1U2]
 gi|323396345|gb|EGA89170.1| coproporphyrinogen III oxidase [Planococcus donghaensis MPA1U2]
          Length = 379

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 182/331 (54%), Gaps = 9/331 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           G+Y+H PFC + C YCDFN  + +   V  + +I S   E+  W +Q    + + +IF G
Sbjct: 4   GLYIHIPFCHQICFYCDFNKVYFKDQPV--DAYIDSLGKELALWKQQGALDKPLETIFLG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P  +  +L  I +   ++ N+E T EANP  +  +  Q     GVNR+S+GV
Sbjct: 62  GGTPTSLTPAQLEKLLAYIHRYVPMAENLEWTSEANPDELTKDKMQVLFDGGVNRLSMGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR H+ S+   A+  AR + F  +SFDL+Y LP Q+M QW+  L+RA +
Sbjct: 122 QSFDEDLLKRLGRTHSNSDVKRAVDSARQVGFENLSFDLMYGLPGQSMQQWDDTLERAFA 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           + + H S Y L IE  T+FY +   G L   +E++  D+Y    +     GL  YEISN 
Sbjct: 182 FDMPHFSAYSLIIEPKTVFYNLMTKGKLNTVTEDLEADMYEKLMNEMDKRGLKQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YW   +YIG+G GAH  V    +  A  ++K    ++  + +    ++
Sbjct: 242 ARPGHESHHNLLYWDNVEYIGVGAGAHGYVDGVRYSNAGPLKK----YMSPLDEGERPIL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +   ++ +E + +GLR   G+S+  ++
Sbjct: 298 STHIVPPHEKMEEEMFLGLRKTAGVSLHHFQ 328


>gi|322391745|ref|ZP_08065210.1| coproporphyrinogen dehydrogenase [Streptococcus peroris ATCC
           700780]
 gi|321145225|gb|EFX40621.1| coproporphyrinogen dehydrogenase [Streptococcus peroris ATCC
           700780]
          Length = 376

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 210/378 (55%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQ--ENFIQSFLT-EMQWMRQLTGPRSISSIFFG 77
           YVH PFC + C YCDF+   ++   V    E+ +Q F + ++Q +R         +++ G
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPVDSYLEHLLQEFHSYDIQKLR---------TLYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  +LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGV
Sbjct: 60  GGTPTALSAPQLETLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGV 119

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q+ +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  +++A
Sbjct: 120 QTFDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMDQVKDNVEKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E +  +++          G   YEIS
Sbjct: 178 ITLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIEELERSGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAV-EAGNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            V +E LS  +Q +E + +GLR + G+S+  +E   G + +    +  RNL  QG ++ V
Sbjct: 293 RVTEEHLSQREQMEEEMFLGLRKKSGVSITRFEEKFGTSFEDLYGQVVRNLCHQGLLQ-V 351

Query: 372 QFSRLRCTQRGMTMLDSV 389
           +  ++R T++G+ + D+V
Sbjct: 352 EGQQIRMTKKGLFLGDTV 369


>gi|163840672|ref|YP_001625077.1| coproporphyrinogen III oxidase [Renibacterium salmoninarum ATCC
           33209]
 gi|162954148|gb|ABY23663.1| oxygen-independent coproporphyrinogen-III oxidase [Renibacterium
           salmoninarum ATCC 33209]
          Length = 409

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 20/394 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQW--- 61
           E  + G      G+Y H PFC  +C YCDFN++      G   Q  +  + ++E+++   
Sbjct: 19  EQVLAGVAERGFGLYAHIPFCAVRCGYCDFNTYTAIELGGGASQAAYSGTAISEIEFAAR 78

Query: 62  -MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            M +   P R +S++FFGGGTP+L+   ++A +L      W +    E+T EANP SV  
Sbjct: 79  AMDKSGLPARKLSTVFFGGGTPTLLPAADLAAMLRAAVGRWGLMPGAEVTTEANPDSVTR 138

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            + Q   +AG  R+S G+QS   + L+ L R H       A+  AR    ++S DLIY  
Sbjct: 139 ESLQELAQAGFTRVSFGMQSAVPKVLKVLDRTHRPERVSQAVAWAREAGLKVSIDLIYGT 198

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +++  W   ++ ALSY  DH+S Y L IE GT      + G++ +  ++   D Y L 
Sbjct: 199 PGESLEDWRSSVEAALSYQPDHISAYALIIEDGTKLAAQIRRGEVPMIDDDDHADKYALA 258

Query: 240 QSITSAHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             +  A GLH YE+SN +    ++  HNL YWR  D+ GIGPGAHS +      V     
Sbjct: 259 DELLVAAGLHWYEVSNWARTPEDACQHNLAYWRGDDWWGIGPGAHSHIG----GVRWWNV 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--I 356
           KHP ++ + ++        +E L S  +  E +M+  RL +G+SV        R +   I
Sbjct: 315 KHPIAYAQRLQTEVSPAAGREILDSSTRELERIMLATRLADGVSVSSLAESGRRAVAGLI 374

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             ER      F        LR T +G  M D+V+
Sbjct: 375 ARERVEPAAAFA-----GVLRLTLQGRFMADAVV 403


>gi|307330489|ref|ZP_07609631.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           violaceusniger Tu 4113]
 gi|306883824|gb|EFN14868.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           violaceusniger Tu 4113]
          Length = 400

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 202/396 (51%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ +  + E++  R
Sbjct: 12  LAGAERRPLGFYLHVPYCATRCGYCDFNTYTASELRGSGGVLASRDNYAEQVVEEVRLAR 71

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + +++ VE+T EANP SV+   
Sbjct: 72  KVLGDDPRPVETVFVGGGTPTLLAAADLGRMLGAIREEFGLAAGVEVTTEANPESVDPRY 131

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+AG NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 132 LAELREAGFNRISFGMQSARQPVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 191

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 192 GESDADWRASLEAALGAGPDHVSAYALIVEEGTRLARRIRRGEVPMTDDDVHADRYLIAE 251

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            I SA G   YE+SN +   A    HN  YWR  D+ G GPGAHS V      V     K
Sbjct: 252 EILSAAGFTWYEVSNWATSPAGRCRHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 307

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +       +E L++E++  E +++ LRL EG  +   E+L  R       
Sbjct: 308 HPGAYAQALGEGRSPGAGRELLTAEERRVERILLELRLAEGCPL---ELL--RPAGAAAA 362

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
                 G ++   + R +   T RG  + D+V+ +L
Sbjct: 363 ARALEDGLLDPEPYGRGQAVLTLRGRLLADAVVRDL 398


>gi|168204725|ref|ZP_02630730.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens E str. JGS1987]
 gi|170663535|gb|EDT16218.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens E str. JGS1987]
          Length = 377

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 188/332 (56%), Gaps = 7/332 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAK-LNMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+E++  S    + + G AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEEYINS----INEKGEAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E    S     +EF+ MGLR   GI   +++
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFK 327


>gi|194017672|ref|ZP_03056282.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus pumilus ATCC 7061]
 gi|194010572|gb|EDW20144.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus pumilus ATCC 7061]
          Length = 379

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 11/376 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   E ++ +   EMQ   +  G + + +IF GGG
Sbjct: 3   AAYIHIPFCEHICHYCDFNKFFIKTQPVDE-YLAALEKEMQHTIEQKGEQELKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  ++  I +    S N VE  +EANP  + +      ++AGVNR+S GVQ
Sbjct: 62  TPTSLTVSQLDQLMTSIHRVLKPSKNLVEFAVEANPDELSLEKLHVLKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L+ +GR H   + + +   AR + F  +S DL++ LP Q        L+ A S 
Sbjct: 122 TFEDDLLKKIGRVHQKKDVLTSFERARAVGFDNISLDLMFGLPHQEKHHVMNSLETAFSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y L       HGLH YEISN++
Sbjct: 182 GAEHYSVYSLIVEPKTVFYNLMQKGKLHLPPQEREAEMYELVMDEMERHGLHQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  V  G   V     KH   +L+++ + G    E
Sbjct: 242 KPGFESQHNLTYWSNEDYFGFGAGAHGYVD-GIRNVNAGPVKH---YLELIEQTGFPYKE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
              ++  +Q +E + +GLR  EG+   D++   G +   L       L+ +G I +    
Sbjct: 298 THQVTKAEQIEEEMFLGLRKIEGVKSADFQAKYGASPEALFPSVLEELEEKGLIVKDDIG 357

Query: 375 RLRCTQRGMTMLDSVI 390
            +R T++G  + + V 
Sbjct: 358 -IRLTRKGKLLGNEVF 372


>gi|87307109|ref|ZP_01089255.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
 gi|87290482|gb|EAQ82370.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
          Length = 384

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 198/382 (51%), Gaps = 24/382 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGG 79
           VYVH PFC+++C YC+F         G+++ I S+L  ++  MRQL  P  + +IF+GGG
Sbjct: 17  VYVHVPFCLRRCGYCNFT-----LVAGRDDLIDSYLQAIEREMRQLEQPHEVDTIFYGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L   A+ +  +++ E ++EANP+ +          AGVNRISLGVQS
Sbjct: 72  TPTHLPTPQLEKLLQLTAERFPPAADYEWSVEANPADLSDEKLDLLAAAGVNRISLGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +  L+ L R+H  ++A +A    R  F +++ DLI+A P +++ QW  ++++A+    
Sbjct: 132 FRDAKLQLLERDHLGADAQSAAQRVRPKFAQLAIDLIFAAPGESVPQWRDDVRQAIELGA 191

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y LT EKGT F+      DL    E    D Y     + +  GL  YE+SN +  
Sbjct: 192 DHVSTYGLTFEKGTTFWNRLLHDDLQEVDEETQRDQYLSGIEMLTTAGLQHYEVSNFARP 251

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
                HN NYW  G Y   GPGA +R   G      +  +    +++ +      V E E
Sbjct: 252 HRRCAHNENYWLGGGYFAFGPGA-ARYVAGRRE---TNHRSTTRYIQRMLAGESPVAEWE 307

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDW--------EMLAGRNLDIECERNLQRQGFIERV 371
            L+ E+ A E L+ GLR  EGI   D+        + LAG  LD       +RQG I R 
Sbjct: 308 ELTPEETARERLIFGLRRLEGIDPADFAAATGFTIDQLAGETLD-----RFERQGAILR- 361

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
           +  R+  ++ G+ + D++  +L
Sbjct: 362 RDDRICLSRAGLLVSDAIWPDL 383


>gi|290580209|ref|YP_003484601.1| putative coproporphyrinogen III oxidase [Streptococcus mutans
           NN2025]
 gi|254997108|dbj|BAH87709.1| putative coproporphyrinogen III oxidase [Streptococcus mutans
           NN2025]
          Length = 380

 Score =  206 bits (524), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 207/378 (54%), Gaps = 23/378 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E     Q+   + + +++ GGGT
Sbjct: 8   AYVHIPFCTQICYYCDF-SKVFIKNQPVDAYLEALIKEFNDYYQI---KDLQTLYIGGGT 63

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L  ++KN  ++   E TIEANP  +  +     +++ VNR+SLGVQ+ 
Sbjct: 64  PTAISGEQLDYLLTNLSKNLNLNMLEEFTIEANPGDLTPDKVAVLKQSAVNRVSLGVQTF 123

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR HN ++   +I   ++  F  +S DLIYALP QT+T  +  + +AL+  +
Sbjct: 124 NNKHLKQIGRGHNEAQIYESIDSLKSAGFDNISIDLIYALPNQTITDVKENVAKALALDI 183

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  ++++   S    HG   YEISN +  
Sbjct: 184 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIISEMEDHGFEHYEISNFTKP 243

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HNL YW   +Y G G GA   V    +R    I    + +LK +++ G A  ++E
Sbjct: 244 DFESRHNLMYWNNAEYFGCGAGASGYVDGIRYRNRGPI----QHYLKAIKEKGQARFQEE 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWE--------MLAGRNLDIECERNLQRQGFIERV 371
            LS  ++ +E L +GLR + GIS++ +E         + G+ +D     +L++ G I  V
Sbjct: 300 RLSQAEKMEEELFLGLRKKSGISIQRFENKFGLPLMEVYGQAID-----DLEKDGLI-LV 353

Query: 372 QFSRLRCTQRGMTMLDSV 389
           +   +R +++G+ + D+V
Sbjct: 354 EKDCIRMSKKGLFLGDTV 371


>gi|283851955|ref|ZP_06369231.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           sp. FW1012B]
 gi|283572679|gb|EFC20663.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           sp. FW1012B]
          Length = 375

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 199/380 (52%), Gaps = 14/380 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC F S  R   + + E F  +   EM+ W ++L  PR + +++FGG
Sbjct: 3   LYIHVPFCRGKCRYCSFVS--RPMDMAEVEVFAAALPLEMRHWGKKLGRPR-VETVYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGV 137
           GTPSL+ P  ++ I+  I +++ +   VE T EANP S+++    +   K GVNR+SLGV
Sbjct: 60  GTPSLLPPWALSRIIPEIGRHFDLDPAVEWTFEANPDSALDGQYLKSLLKYGVNRLSLGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL +  LRFLGR H+A+ A+AA  LAR + F  +S D I+ LP Q    W   L+ A++
Sbjct: 120 QSLSDTDLRFLGRPHDAAGAVAAYGLARQVGFKNISLDFIWGLPGQREAAWLETLKVAVN 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HLS Y LT+E GT   +    G + LP E     ++          G   YEISN 
Sbjct: 180 LRPEHLSCYGLTVEPGTPLAEDVAAGGVALPPEGEQGRMFVHGAEFLEEQGYLQYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           + +G  S HN  YW   DY+G+GPGA S   +G  R     +    + L    K G A  
Sbjct: 240 ARMGFMSRHNSGYWEGRDYLGLGPGAVS--TLGGLRFENPGDVRQWAALARAGKCGQAA- 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFS 374
             E L+  ++  E +M+ LR  +G+ +  +    GR+   D E      RQ  + R+   
Sbjct: 297 --EALTPAERVREMVMLSLRTAKGLRLAAYRKATGRDFIKDNEALVTALRQKDLIRLSAG 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            LR T+ G  + + ++  LA
Sbjct: 355 HLRLTKNGFLVSNVILERLA 374


>gi|332654565|ref|ZP_08420308.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcaceae bacterium D16]
 gi|332516529|gb|EGJ46135.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcaceae bacterium D16]
          Length = 406

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 196/382 (51%), Gaps = 12/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ LG+Y+H PFC  KC YCDF S   R     + + ++ L+ ++    L     + +I+
Sbjct: 7   ADKLGIYIHIPFCRSKCDYCDFYSLAGR-DDRMDQYQKALLSHIKETAPLAQDFPVDTIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS    + +  +L  I K + V  + E+T+E NP SV+V   +  RKAGVNR+S+
Sbjct: 66  IGGGTPSYYGAKRLKELLGVIRKLYKVEKDAEVTVECNPDSVDVKALKILRKAGVNRLSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS     L  + R H   +   A   AR   F  +S DLIY LP QTM  W+  ++ A
Sbjct: 126 GMQSANACELERIHRIHTPQQVNEAATAARKAGFTNLSLDLIYGLPGQTMDSWKATVEHA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS    HLS Y L +E+GT        G+ VLP ++   DLY  T       G   YEIS
Sbjct: 186 LSLIPQHLSCYGLKVEEGTPLAARVAQGE-VLPDDDQQADLYLWTVGRLERAGYPQYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G  S HNL YW    YIG GPGAHS    G  R   S  +  +++++ V + G  
Sbjct: 245 NFAKPGFASRHNLRYWLTQPYIGFGPGAHS--DFGGRRY--SFVRDLDAYIQGVLQGGDI 300

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE---MLAGRNLDIECERNLQRQGFIERV 371
           + E E +   ++  E+LM+ LR  +GI+ +++     +    L    E+  + QG+ E+ 
Sbjct: 301 IDESEIIPKRERCGEYLMLRLRTVQGINEQEYRSTYFMDFAPLQARLEQ-FRAQGWAEQT 359

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              R   T +G  + + +I +L
Sbjct: 360 D-GRWHFTPKGFLLSNQLIGDL 380


>gi|291528951|emb|CBK94537.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium rectale M104/1]
          Length = 397

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 209/397 (52%), Gaps = 26/397 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFCV+KC YCDF S        +  +++  + EM +   L     +SS++ G
Sbjct: 3   NLEIYIHIPFCVRKCEYCDFLSFPAD-DDAKLRYVKGLMAEMIFYGPLMKNYQVSSVYIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS I+ Q IA +++G+   + V  + EI+IE NP ++       YR AG+NR+S+G+
Sbjct: 62  GGTPSSIDEQWIAALMEGVFDCFNVLPDAEISIECNPGTLSREKLLAYRDAGINRLSIGL 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   + +    +ARN+ F  ++ DL+Y LP Q+ +Q+   + + + 
Sbjct: 122 QSANNDELKLLGRIHTFEQFVTNYEVARNVGFKNINVDLMYGLPGQSASQYMATVNKIIR 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITSAH 246
              DH+S Y L +EKGT FY+ +K  D+V          LP+E+   D+    Q      
Sbjct: 182 LHPDHISAYSLIVEKGTPFYEKYK-FDMVRQEAGMRTEFLPNEDELYDMEKAGQKAFMDA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH------ 300
           G   YE SN++  G E  HN+ YW   DY+G+G GA S +    +     ++++      
Sbjct: 241 GYRQYETSNYAKRGMECRHNIGYWTRADYLGLGIGAASLISNVRYTNTSDMDEYLSRCRH 300

Query: 301 -PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--- 356
             +    + R N H  V  + +  + Q +EF+ +GLR+ EG++ + +E   G ++D    
Sbjct: 301 IHDVGDDIFRANLH--VAADVIDKKGQMEEFMFLGLRMNEGVTREAFERAFGISIDAIYK 358

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +   +L++Q  +  V+   +  ++RG  + + V+A  
Sbjct: 359 DTIDSLKKQELL-VVKAGHIYLSERGKDVANYVMAQF 394


>gi|329934630|ref|ZP_08284671.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
 gi|329305452|gb|EGG49308.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
          Length = 410

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 198/388 (51%), Gaps = 22/388 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMRQLTG--PR 69
           LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  R++ G  PR
Sbjct: 30  LGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLIDEVRLARKVLGDDPR 89

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTP+L++  ++  +L  + + + ++++ EIT EANP SV+       R+ G
Sbjct: 90  EVRTVFVGGGTPTLLDAADLVRMLGAVREEFGLAADAEITTEANPESVDPAYLAALREGG 149

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NRIS G+QS  +  L+ L R H        +  AR   F  ++ DLIY  P ++   W 
Sbjct: 150 FNRISFGMQSARQHVLKVLDRTHTPGRPERCVAEARAAGFEHVNLDLIYGTPGESDEDWR 209

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  AL    DH+S Y L +E+GT      + G++ +  ++V  D Y + + + S+ G 
Sbjct: 210 ASLDAALGAGPDHVSAYALIVEEGTRLAARIRRGEVPMTDDDVHADRYLIAEEVLSSAGY 269

Query: 249 HAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V     KHP ++   
Sbjct: 270 DWYEVSNWATSDKARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVKHPGAYAGA 325

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           + +       +E L+ E +  E +++ LRLREG+ +   ++L  R   +   R     G 
Sbjct: 326 LAEGRSPGAGREILTEEDRRVERILLELRLREGVPL---DLL--RTEGLAASRRALADGL 380

Query: 368 IERVQF--SRLRCTQRGMTMLDSVIANL 393
           ++   +   R   T RG  + D+V+ +L
Sbjct: 381 LDPGPYEAGRAALTLRGRLLADAVVRDL 408


>gi|330839598|ref|YP_004414178.1| oxygen-independent coproporphyrinogen III oxidase [Selenomonas
           sputigena ATCC 35185]
 gi|329747362|gb|AEC00719.1| oxygen-independent coproporphyrinogen III oxidase [Selenomonas
           sputigena ATCC 35185]
          Length = 385

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 198/384 (51%), Gaps = 20/384 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----SI 71
              GVYVH PFC +KC YCDF S+      G+E ++  +   +       G R     ++
Sbjct: 2   GDFGVYVHIPFCRRKCFYCDFPSYA-----GEERWMSRYREALCREIAAQGCRCLQEGAV 56

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ +   ++  ++  + +++ ++   E T+EANP +V+    +  R+AGVN
Sbjct: 57  RTVYIGGGTPTALAADDLLAVICSVRESFHLTGAEEFTVEANPGTVDAKLLERLREAGVN 116

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S GVQS  +  L  +GR H A EA  A+ +A+    R+S DL+Y LP QT++  +  +
Sbjct: 117 RLSFGVQSFSDALLAAIGRIHTAREAEDAVRMAQKAGFRVSLDLMYGLPGQTLSDLKDSV 176

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            RA +  + H+S+Y L +E GT F +M + G L LP+++   D+Y+   +     G   Y
Sbjct: 177 ARAAALGIGHISVYGLAVEDGTPFARMEEAGRLHLPTDDKCGDMYDYITAELPRLGYRRY 236

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G ES HNL YW+   YIG+G  AHS      H      E+    ++  +   
Sbjct: 237 EISNYARAGEESRHNLAYWQDVSYIGLGAAAHSYW----HGQRTENEQDLCRYIACIEGE 292

Query: 312 GHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQG 366
           G   +  E+E  S E   +EF  + LR  +GI  K +      ++     E    LQ  G
Sbjct: 293 GGLSLAREEEPCSRESHIEEFAFLALRTADGIDKKRFRGTFASDVHEVYGEVIARLQAAG 352

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E    S +R T++GM   + V 
Sbjct: 353 LVEETAVS-IRLTEQGMKFGNRVF 375


>gi|327403343|ref|YP_004344181.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
 gi|327318851|gb|AEA43343.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
          Length = 376

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 207/382 (54%), Gaps = 22/382 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G Y+H PFC +KC YCDF  H       ++  + +  +E++   +     S  +I+FGGG
Sbjct: 3   GCYIHIPFCAQKCSYCDF--HFSTNHSYKQEMVDALCSELEMRAKDWKAESFETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + +  ++  + K ++VS++VEI++E NP    +   +G++K GVNR+S+G+QS
Sbjct: 61  TPSILTNEQLNQLIQQVKKTYSVSADVEISLECNPDDCSLEQLEGWKKLGVNRLSMGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +EQ L+++ R+H ASE++ A+  A+ + F  +S DLIY LP  ++  W  +L + ++  
Sbjct: 121 FDEQQLKWMNRSHTASESLNAVLNAKQVGFDELSLDLIYGLPNMSLESWAAQLDQIIALN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y LT+E+ T      K+G +++ + +   + + L  +     G   YEISN + 
Sbjct: 181 PEHISAYCLTVEEKTALSSWVKEGKIIVSTIDQQSEQFELLVAKLKTAGFEQYEISNFAR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN +YW+  +YIGIGP AH      + +     + + +++L  ++K G      
Sbjct: 241 NAHYSKHNTSYWKGTNYIGIGPSAHGY----NQKERYWNQANNKAYLLEIQK-GKLPETI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDIECERNLQRQGFIERV 371
           E LS   Q +E L++GLR + G+S +    L   N       +D E ++ L +   I   
Sbjct: 296 ETLSHFDQFNELLLIGLRTKWGVSKEKLFQLIQPNSKWTKIVIDYEEQKMLIQTDEI--- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
               +  TQ G  + D++ A+L
Sbjct: 353 ----IVLTQEGRLLADAIAADL 370


>gi|169829251|ref|YP_001699409.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41]
 gi|168993739|gb|ACA41279.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Lysinibacillus
           sphaericus C3-41]
          Length = 381

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 175/331 (52%), Gaps = 8/331 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFG 77
           GVY+H PFC + C YCDFN    + +   E +I++   EM    Q    G R I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKFYFKNQPVDE-YIEALGKEMALATQKNPEGFRHIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + PQ +  +L  I     ++S  E T EANP  +     Q     GVNR+S+GV
Sbjct: 63  GGTPTALSPQQLDKLLTLIHTYIPMNSVTEFTSEANPDELSAEKLQVLFDGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L+ +GR H+         LA+ I F  +S DL+Y LP QTM QW+  L++AL 
Sbjct: 123 QSFNQELLQKIGRTHSNEHVYKTTALAKKIGFQNISIDLMYGLPGQTMAQWKDSLEKALV 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L+LP+E++  D+Y++       HGL  YEISN 
Sbjct: 183 LDLPHFSAYSLIVEPKTIFYNQYAKGKLLLPTEDLEADMYDVLMQQMELHGLQQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW   +Y G G GAH  +      V  S     + +++ V      +V
Sbjct: 243 AKPGYHSEHNKIYWDNDEYAGFGAGAHGYLA----GVRYSNHGPLKKYMETVLAGELPIV 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            +  +S  ++ +E + +GLR  +G+  + +E
Sbjct: 299 HEHEVSQAEKREEQMFLGLRKTDGVKHRIYE 329


>gi|238923984|ref|YP_002937500.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           rectale ATCC 33656]
 gi|238875659|gb|ACR75366.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           rectale ATCC 33656]
          Length = 397

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 24/396 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFCV+KC YCDF S        +  +++  + EM +   L     +SS++ G
Sbjct: 3   NLEIYIHIPFCVRKCEYCDFLSFPAD-DDAKLRYVKGLMAEMIFYGPLMKNYQVSSVYIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS I+ Q IA +++G+   + V  + EI+IE NP ++       YR AG+NR+S+G+
Sbjct: 62  GGTPSSIDEQWIAALMEGVFDCFNVLPDAEISIECNPGTLSREKLLAYRDAGINRLSIGL 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   + +    +ARN+ F  ++ DL+Y LP Q+ +Q+   + + + 
Sbjct: 122 QSANNDELKLLGRIHTFEQFVTNYEVARNVGFKNINVDLMYGLPGQSASQYMATVNKIIR 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITSAH 246
              DH+S Y L +EKGT FY+ +K  D+V          LP+E+   D+    Q      
Sbjct: 182 LHPDHISAYSLIVEKGTPFYEKYK-FDMVRQEAGMRTEFLPNEDELYDMEKAGQKAFMDA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE SN++  G E  HN+ YW   DY+G+G GA S +    +     ++++  S  +
Sbjct: 241 GYRQYETSNYAKRGMECRHNIGYWTRADYLGLGIGAASLISNVRYTNTSDMDEYL-SRCR 299

Query: 307 MVRKNGHAV------VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---E 357
            +   G  +      V  + +  + Q +EF+ +GLR+ EG++ + +E   G ++D    +
Sbjct: 300 HIHDVGDDIFKANLHVSADVIDKKGQMEEFMFLGLRMNEGVTREAFERAFGISIDAIYKD 359

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              +L++Q  +  V+   +  ++RG  + + V+A  
Sbjct: 360 TIDSLKKQELL-VVKAGHIYLSERGKDVANYVMAQF 394


>gi|172056816|ref|YP_001813276.1| coproporphyrinogen III oxidase [Exiguobacterium sibiricum 255-15]
 gi|171989337|gb|ACB60259.1| oxygen-independent coproporphyrinogen III oxidase [Exiguobacterium
           sibiricum 255-15]
          Length = 381

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 194/379 (51%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             YVH PFC   C YCDFN    + +   E ++ +   E++   Q      + +IF GGG
Sbjct: 5   AAYVHIPFCEHICYYCDFNKVFLKNQPVAE-YLDALEREIELTLQHYPTDRLETIFIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+ +    +  ++D I+K+      + +E T+E+NP  V        +  GVNR+S GV
Sbjct: 64  TPTALNEAQMQRLMDIISKHLLPLTDATLEYTVESNPDGVSPEKLDIMKAGGVNRVSFGV 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L  +GR H  ++    +  A   F  +S DL++ LP QT+ Q   +++RAL  
Sbjct: 124 QSFDDGLLERIGRTHREAKVAETLDHAAKRFDNISVDLMFGLPNQTLEQVRYDVKRALHL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E  T+F    + G L LP++++  D+Y L      A GLH YEISN S
Sbjct: 184 PITHISSYSLILEPHTVFAIQERKGKLPLPTQDLEADMYRLMIETIEAGGLHQYEISNFS 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW   +Y G G G+HS +   + R  I+   H       ++  G  V  
Sbjct: 244 LPGRESRHNRVYWENDEYYGFGAGSHSYIN-KTRRANIAPIPH------YIKAEGLPVRN 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
           +  L+  ++ +E + +GLR++EG+S + +E   G +LD    + + +   +G +ER   +
Sbjct: 297 ETPLTEVERMEEEMFLGLRMKEGVSERHFEEKYGHSLDRVFGQTIAKLLPRGLVERTA-T 355

Query: 375 RLRCTQRGMTMLDSVIANL 393
            LR T  G+ + + V A  
Sbjct: 356 HLRLTDAGVPLANEVFAEF 374


>gi|254414629|ref|ZP_05028394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microcoleus chthonoplastes PCC 7420]
 gi|196178477|gb|EDX73476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microcoleus chthonoplastes PCC 7420]
          Length = 409

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 186/349 (53%), Gaps = 11/349 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHV-----RRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           Y+H PFC ++C YCDF   V     R    G  E +++    E+Q     T   S+S+IF
Sbjct: 8   YIHIPFCRRRCYYCDFPVSVVGDKARGSTSGTIEEYVEVLAQEIQTTPASTC--SLSTIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  Q +  ILD +A+ + ++++ EI++E +P + +++  +GYR AGVNR+SL
Sbjct: 66  FGGGTPSLLSTQQLNRILDTLAQQFGITTDAEISMEIDPGTFDLSQIKGYRDAGVNRVSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L   GR+H  +    A+ L R +  P  S DLI  LP QT+ QW+  L  A
Sbjct: 126 GVQAFQDELLGICGRSHQLNHIFTAVELLRQVEVPDWSLDLISGLPTQTLEQWQESLAAA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A  H+S Y LTIE  T F + +  G   LP++     +Y L Q + +  G   YEIS
Sbjct: 186 IQLAPTHISCYDLTIEPVTAFGRQYSPGISPLPTDETTAQMYRLAQQLLTDAGYEHYEIS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++    +  HN  YW    + G G GA S ++        +  ++  +W++   + G  
Sbjct: 246 NYALPTHQCRHNRVYWENRPFYGFGMGAASYIQARRFTRPRTRREY-YAWVEQFIQAG-G 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           V++     +     E +M+GLRL +G+S+       G  L     R+LQ
Sbjct: 304 VLDSPLSRTTDILLETVMLGLRLADGLSLSALREKFGETLIERIWRSLQ 352


>gi|302534347|ref|ZP_07286689.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
 gi|302443242|gb|EFL15058.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
          Length = 416

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 197/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G G   LG Y+H P+C  +C YCDFN++      G       +EN+  + + E++  R
Sbjct: 28  LEGAGERPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRENYADTLIDEVRLAR 87

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR++ ++F GGGTP+L+   ++  +L  I   + ++ + E+T EANP SV    
Sbjct: 88  KVLGDDPRAVRTVFVGGGTPTLLPAGDLVRMLAAIRDEFGLAEDAEVTTEANPESVNPEY 147

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R  G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 148 LAELRAGGFNRISFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFEHVNLDLIYGTP 207

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +  
Sbjct: 208 GESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAD 267

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 268 QVMAEAGYSWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 323

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E LS+E +  E +++ LRL +G+ +    +LA   L     
Sbjct: 324 HPGAYAAALAEGRSPGAGRELLSAEDRRVERILLELRLVDGVLLS---LLAPAGL--AAS 378

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G ++   +   R   T RG  + D+V+ +L
Sbjct: 379 RRALADGLLDPAPYEAGRAVLTLRGRLLADAVVRDL 414


>gi|255327132|ref|ZP_05368207.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           mucilaginosa ATCC 25296]
 gi|255295750|gb|EET75092.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           mucilaginosa ATCC 25296]
          Length = 428

 Score =  206 bits (523), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 184/351 (52%), Gaps = 15/351 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL 65
            +  G  +    +YVH PFC  +C YCDFN++        +G   +    + E+ +  + 
Sbjct: 19  TSAAGCETRDFSLYVHIPFCSVRCGYCDFNTYATEDFGDGIGLGTYAADAIAEILFAART 78

Query: 66  -----TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                   R + ++FFGGGTP+ +  +++  IL      + +    E+T EANP SV   
Sbjct: 79  LEASGVAKRPMHTVFFGGGTPTKLPARDLVRILQAAIDVFGLVEGAEVTTEANPDSVTRE 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           + Q  +  G  R+S G+QS+  + L+ L R H  S     +  A+ +  ++S DLIY  P
Sbjct: 139 DLQTLKDGGFTRVSFGMQSVVPEVLQVLDRTHTPSNVPKVVAWAKEVGLQVSVDLIYGSP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++  QWE  ++ A+SY  DH+S Y L +E GT      + G+  +P E++  D+Y L +
Sbjct: 199 GESQQQWEQSVRAAISYEPDHISAYSLIVEDGTKLAAQIRRGEYTMPDEDLMADMYLLAE 258

Query: 241 SITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G + YE+SN+S      S HNL YWR  D+ GIGPGAHS V  G+    +   K
Sbjct: 259 ELLTEAGYNWYEVSNYSRSEDTRSDHNLAYWRNQDWWGIGPGAHSHVN-GTRWWNV---K 314

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           HP  + + VR        +E L +  +A E +M+ +R+REG++++  E+LA
Sbjct: 315 HPVPYAQKVRAGESPAAAREVLDTATRAFETIMLMIRVREGLAMR--ELLA 363


>gi|291524727|emb|CBK90314.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium rectale DSM 17629]
          Length = 397

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 24/396 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFCV+KC YCDF S        +  +++  + EM +   L     +SS++ G
Sbjct: 3   NLEIYIHIPFCVRKCEYCDFLSFPAD-DDAKLRYVKGLMAEMIFYGPLMKNYQVSSVYIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS I+ Q IA +++G+   + V  + EI+IE NP ++       YR AG+NR+S+G+
Sbjct: 62  GGTPSSIDEQWIAALMEGVFDCFNVLPDAEISIECNPGTLSREKLLAYRDAGINRLSIGL 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   + +    +ARN+ F  ++ DL+Y LP Q+ +Q    + + + 
Sbjct: 122 QSANNDELKLLGRIHTFEQFVTNYEVARNVGFKNINVDLMYGLPGQSASQHMATVNKIIR 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITSAH 246
              DH+S Y L +EKGT FY+ +K  D+V          LP+E+   D+    Q      
Sbjct: 182 LHPDHISAYSLIVEKGTPFYEKYK-FDMVRQEAGMRTEFLPNEDELYDMEKAGQKAFMDA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE SN++  G E  HN+ YW   DY+G+G GA S +    +     ++++  S  +
Sbjct: 241 GYRQYETSNYAKRGMECRHNIGYWTRADYLGLGIGAASLISNVRYTNTSDMDEYL-SRCR 299

Query: 307 MVRKNGHAV------VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---E 357
            +   G  +      V  + +  + Q +EF+ +GLR+ +G++ +D+E   G ++D    +
Sbjct: 300 HIHDVGDDIFKANLHVAADVIDKKGQMEEFMFLGLRMNDGVTREDFERAFGISIDAIYKD 359

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              +L++Q  +  V+   +  ++RG  + + V+A  
Sbjct: 360 TIDSLKKQELL-VVKAGHIYLSERGKDVANYVMAQF 394


>gi|255744298|ref|ZP_05418251.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholera CIRS 101]
 gi|255738238|gb|EET93630.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholera CIRS 101]
          Length = 351

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 116/285 (40%), Positives = 155/285 (54%), Gaps = 7/285 (2%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RIS
Sbjct: 27  LLGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRIS 86

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +
Sbjct: 87  IGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQ 146

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YEI
Sbjct: 147 AIALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYEI 202

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +    
Sbjct: 203 SGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLA 262

Query: 313 HAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
            A ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 263 KAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 307


>gi|24379821|ref|NP_721776.1| coproporphyrinogen III oxidase [Streptococcus mutans UA159]
 gi|24377790|gb|AAN59082.1|AE014974_12 putative coproporphyrinogen III oxidase [Streptococcus mutans
           UA159]
          Length = 380

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 207/378 (54%), Gaps = 23/378 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E     Q+   + + +++ GGGT
Sbjct: 8   AYVHIPFCTQICYYCDF-SKVFIKNQPVDAYLEALIKEFNDYYQI---KDLQTLYIGGGT 63

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L  ++KN  ++   E TIEANP  +  +     +++ VNR+SLGVQ+ 
Sbjct: 64  PTAISGEQLDYLLTNLSKNLNLNMLEEFTIEANPGDLTPDKVAVLKQSAVNRVSLGVQTF 123

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR HN ++   +I   ++  F  +S DLIYALP QT+T  +  + +AL+  +
Sbjct: 124 NNKHLKQIGRGHNEAQIYESIDSLKSAGFDNISIDLIYALPNQTITDVKENVAKALALDI 183

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  ++++   S    HG   YEISN +  
Sbjct: 184 PHLSLYNLILEHHTVFMNKMRRGKLNLPAEDLEAEMFDYIISEMEDHGFEHYEISNFTKP 243

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   V    +R    I    + +LK +++   A  ++E
Sbjct: 244 GFESRHNLMYWNNAEYFGCGAGASGYVDGIRYRNRGPI----QHYLKAIKEKRQARFQEE 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWE--------MLAGRNLDIECERNLQRQGFIERV 371
            LS  ++ +E L +GLR + GIS++ +E         + G+ +D     +L++ G I  V
Sbjct: 300 RLSQSEKMEEELFLGLRKKSGISIQRFEDKFGLPLMEVYGQAID-----DLEKDGLI-LV 353

Query: 372 QFSRLRCTQRGMTMLDSV 389
           +   +R +++G+ + D+V
Sbjct: 354 EKDCIRMSKKGLFLGDTV 371


>gi|271963813|ref|YP_003338009.1| coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
 gi|270506988|gb|ACZ85266.1| Coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
          Length = 403

 Score =  205 bits (522), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 197/397 (49%), Gaps = 24/397 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ 64
           ++ + G G    G YVH PFCV +C YCDFN++           +++  + + E++  R 
Sbjct: 19  DSALHGLGGRPFGFYVHVPFCVTRCGYCDFNTYTASELGPGASHKDYADTAIDEVRRARA 78

Query: 65  LTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             G     + ++FFGGGTP+L+   ++  IL  I + + ++   E+T EANP SV+    
Sbjct: 79  NLGGADLPVETVFFGGGTPTLLPAGDLVRILGAIEEEFGLAPGAEVTTEANPESVDPAYL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R  G  R+S G+QS  E  L  L R H       A+  AR   F  ++ DLIY+ P 
Sbjct: 139 SELRGGGFTRMSFGMQSAREHVLEVLERRHTPGRPAHAVREAREAGFDHVNLDLIYSTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W   L  A+    DH+S Y L +E GT      + G+L +P ++VA D Y +  +
Sbjct: 199 ESDDDWRASLAAAIEAGPDHVSAYSLIVEDGTRLAARIRRGELPMPDDDVAADRYLIADA 258

Query: 242 ITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + +  G   YE+SN +   A    HNL YW  GD+ G+GPGAHS V  G+    +   KH
Sbjct: 259 MLAEAGFEWYEVSNWATSEAGRCRHNLLYWTGGDWWGVGPGAHSHVG-GTRWWNV---KH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--LAGRNLDIEC 358
           P ++ + +         +E L++E +A E LM+ LRL +G  +K+ E   +  R L    
Sbjct: 315 PAAYARRLASGVSPAHAREVLTAEDRAVERLMLELRLVQGFPLKEIERPPVVARAL---- 370

Query: 359 ERNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
                  G +E   F   R   T RG  + D+++ +L
Sbjct: 371 -----ADGLLEMEPFKAGRAVLTLRGRLLADALVRDL 402


>gi|239931354|ref|ZP_04688307.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
 gi|291439726|ref|ZP_06579116.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
 gi|291342621|gb|EFE69577.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
          Length = 413

 Score =  205 bits (522), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 195/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++   E++  R
Sbjct: 25  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYAETLTDEIRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++++ E+T EANP SV+   
Sbjct: 85  KVLGDDPREVRTVFVGGGTPTLLAADDLVRMLGAIREEFGLAADAEVTTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R  G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LATLRAGGFNRISFGMQSARQHVLKVLDRIHTPGRPEACVAEARAAGFEHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  AL    DH+S Y L +E+GT   +  + G++    ++V  D Y + +
Sbjct: 205 GESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPTTDDDVHADRYLIAE 264

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              SA G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 ETLSAAGFAWYEVSNWATSQAARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E LS E +  E +++ LRL EG+ +    +L  R   +   
Sbjct: 321 HPGAYAAALAQGRSPGAGRELLSEEDRRVERILLELRLEEGVPLS---LL--RPEGLGAA 375

Query: 360 RNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
           R     G +    +   R   T RG  + D+V+ +L
Sbjct: 376 RRALADGLLRPGPYEEGRAALTLRGRLLADAVVRDL 411


>gi|331084612|ref|ZP_08333700.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330410706|gb|EGG90128.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 404

 Score =  205 bits (522), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 187/359 (52%), Gaps = 39/359 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +Y+H PFC+KKC YCDF S    R  +  + ++ + + E++  ++L     +++IFF
Sbjct: 4   ELELYIHIPFCMKKCAYCDFLSGPAPRETI--DRYVTALVAEIRQYQKLAENYRVTTIFF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++    +  I D +   + + ++ EIT+EANP +V   N Q YR  G+NRIS G
Sbjct: 62  GGGTPSILSGGRMKEIFDALRDVFEIQADAEITMEANPGTVTKENLQAYRACGINRISFG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS++++ L+ LGR H   +   +  LAR   F  ++ DLI A+P QT+  WE  L   +
Sbjct: 122 LQSVDDKELKLLGRVHTMRQFEESYDLARKAGFQNINIDLISAIPGQTVESWEHTLDTVI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH-----------------KDGDLV--------LPSEN 230
               +H+S Y L IE+GTLFY+++                  DG  +        LP E 
Sbjct: 182 RMNPEHISAYSLIIEEGTLFYEIYGENAKEEQDSQCEKCLADDGKQMDTGKNFPKLPDEE 241

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
               +Y LT     A G   YE+SN++  G    HN  YW+  +Y+GIG GA S ++   
Sbjct: 242 AERRMYELTAEKLEAAGYLQYEVSNYAKPGYACRHNKGYWQRVEYLGIGTGAASLIENER 301

Query: 291 HRVAISIEKHPESWLKMVRKNG---HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +       +H       +R NG       EKE L    Q +E + +GLR++EG++ + +
Sbjct: 302 Y-------QHISDTDLYIRANGRLDQIEEEKETLDWNAQVEETMFLGLRMKEGVNKQKF 353


>gi|222151482|ref|YP_002560638.1| oxygen-independent coproporphyrinogen III oxidase homolog
           [Macrococcus caseolyticus JCSC5402]
 gi|222120607|dbj|BAH17942.1| oxygen-independent coproporphyrinogen III oxidase homolog
           [Macrococcus caseolyticus JCSC5402]
          Length = 371

 Score =  205 bits (522), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 182/327 (55%), Gaps = 13/327 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDFN  + + +   E ++   + E+ ++ +    R + ++F GGGT
Sbjct: 4   LYIHIPFCNRICTYCDFNKFLIKNQPVDE-YLDCLIKELSFIDE----RDLLTVFIGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +L  I +++T+    E T+EANP  +  N     ++ GVNR+SLGVQ+ 
Sbjct: 59  PTALNEGQLERLLSYIEQSFTIHE--EFTMEANPDELTRNKIALMKQYGVNRLSLGVQTF 116

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +   L+ LGR H   +   A+  A  +    +S DL+Y LP QT+ Q   +L  A S  +
Sbjct: 117 DNDLLKSLGRTHQEQDIFNAVSAANELGIESISLDLMYHLPTQTLEQCRRDLALATSLDI 176

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +E  T FY M+K G L LP E +A ++Y LT +  SA G H YEISN++  
Sbjct: 177 HHISSYSLILEPKTQFYNMYKKGMLQLPDEQLAAEMYTLTMNTLSAQGFHQYEISNYAKG 236

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G G+H  +  G     I+   H   ++K + K G AV E+ 
Sbjct: 237 HHESTHNKVYWQNKEYYGAGAGSHGYID-GVRYYNIAPVPH---YIKAMHK-GDAVKERI 291

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDW 346
            ++ +   +EF+ +GLRL EGIS  ++
Sbjct: 292 PVTVDAAMEEFMFLGLRLNEGISKNEF 318


>gi|82751186|ref|YP_416927.1| coproporphyrinogen III oxidase [Staphylococcus aureus RF122]
 gi|82656717|emb|CAI81144.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus RF122]
          Length = 374

 Score =  205 bits (522), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 181/335 (54%), Gaps = 12/335 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMEIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLCADMYQLMMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            S  ++ +E + +GLRL EG+S + ++   G++++
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVSSRRFKKKFGQSIE 330


>gi|257066667|ref|YP_003152923.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
 gi|256798547|gb|ACV29202.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
          Length = 372

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 186/331 (56%), Gaps = 10/331 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G Y+H PFC KKC YCDF +     +   + +I + + E++  ++     +I +I+ G
Sbjct: 3   KVGCYIHIPFCEKKCYYCDF-AAFEGLEAWIDPYIDNLIKEIRLYKE-NMDLAIDTIYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPS I+P  I  IL  +       +++ E ++E NP+S++ +  Q Y+  GV RISLG
Sbjct: 61  GGTPSYIDPLYIEKILREVR---GFDTDIKEFSLECNPNSIDSDKLQAYKDLGVTRISLG 117

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS +++ LR +GRNHN   AI  I L ++    +SFDL+  LP Q +   + +L+    
Sbjct: 118 VQSFDDKVLRNIGRNHNKEIAIRDIKLIKSFGFDLSFDLMLNLPGQDLASVKKDLEMVKR 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + DH+S Y L ++KG+ FY + K G L L  +++ VD+++         GL  YEISN 
Sbjct: 178 LSPDHVSRYSLILDKGSRFYALDKKGKLDLMEDDLEVDIFSYLVDELDKLGLKRYEISNF 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES+HN  YW   DYI  G GA   +    +    +  K+     K +R+    +V
Sbjct: 238 ARKGKESIHNKKYWNIDDYIAFGLGASGFLSNKRYNNTRNFVKYD----KALRQGKFPLV 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            +EF+  +++  E+++  LR REGI++++++
Sbjct: 294 FEEFIDKDEREKEYIIFKLREREGINLREFK 324


>gi|225351983|ref|ZP_03743006.1| hypothetical protein BIFPSEUDO_03588 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157230|gb|EEG70569.1| hypothetical protein BIFPSEUDO_03588 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 401

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 197/395 (49%), Gaps = 31/395 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEM------QWMRQLTGPRSI 71
            Y+H PFC+++C YCDFN++          + N+    + EM      Q    +  P + 
Sbjct: 4   AYIHVPFCIRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMSIVHDWQIAHGVNEPEA- 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +++FFGGGTP++++  ++  +L+ +   W ++ N EIT EANP +V  +  +     G N
Sbjct: 63  ATVFFGGGTPTILKASDLVAMLNAVRDTWGIADNAEITTEANPDTVNADYVKELADGGFN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L+ L R H  +   A I  A     R S DLIY  P +++  W + +
Sbjct: 123 RISFGMQSAVPSVLKTLDRTHTPANVAAGIAAANAAGMRSSVDLIYGAPGESLDDWRVSV 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   VDH+S Y LT+   T   +    G L  P ++     Y +   + SA GL  Y
Sbjct: 183 RTAIDLGVDHISAYALTVAPNTKMGRQIAVGTLPTPDDDDEATKYEIADDLLSAAGLEWY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR----VKVGSHRVAISIEK-------- 299
           EISN +  G ES HNL YWR  D+ G+GPGAHS     + V     A + E         
Sbjct: 243 EISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGNVMDVEQSTSAETSETVKSSGLRS 302

Query: 300 ----HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
               HP  W + +  +       E +S+E+  +E +M+GLR+REG+ +       G  +D
Sbjct: 303 WDIAHPRMWGQAINDDNVPWSGSERISNEENLEEIIMLGLRIREGLDLS----RLGNMVD 358

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +   + ++ +G I  ++  R+  T+ G  + D+VI
Sbjct: 359 MARIQPMEDEGLI-VIRDGRVIPTRTGRLLNDTVI 392


>gi|73662483|ref|YP_301264.1| coproporphyrinogen III oxidase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494998|dbj|BAE18319.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 374

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 199/378 (52%), Gaps = 23/378 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    +   E ++   + EMQ+ +     + + ++F GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIHNQPVDE-YLDCLIKEMQYSKT----KVLETVFVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  + +  +L  I   + +    E + EANP  + +   Q  +  GVNR+S+GVQ+ +
Sbjct: 62  TALSYEQLKRLLKAITDIFEIKG--EFSFEANPDELTLEKVQLLKDFGVNRLSMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN S+   A+  AR +  P +S DL+Y LPKQT+  ++  L++AL+  +D
Sbjct: 120 PELLEILGRTHNTSDIYQAVTNARAVGIPSISLDLMYHLPKQTIDDFKDSLEKALAMDID 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M+K G L +P+E++  ++Y           LH YEISN   +G
Sbjct: 180 HISSYGLILEPKTQFYNMYKKGKLKIPNEDIGEEMYEYLLERMQRSELHQYEISNFGKMG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW+   Y G G GA   V  G     ++   H   ++K ++ N   ++E   
Sbjct: 240 HESEHNKVYWKNEGYYGFGAGASGYVD-GERYSNVNPVNH---YIKKIKNNERPLLESTR 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIERVQFSRL 376
            +  +Q +E + +GLR+ +G++   ++     ++D       E  L+R+  ++   F  +
Sbjct: 296 PTKNEQMEEEMFLGLRMNQGVNKARFKEKFDLSIDEVYGTTIEDLLKRELIVDNQGF--I 353

Query: 377 RCTQRGMTMLDSVIANLA 394
             T+RG      VI NL 
Sbjct: 354 SMTERG-----KVIGNLV 366


>gi|300087687|ref|YP_003758209.1| oxygen-independent coproporphyrinogen III oxidase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527420|gb|ADJ25888.1| oxygen-independent coproporphyrinogen III oxidase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 380

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 177/333 (53%), Gaps = 14/333 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTGPRSISS 73
           + L +Y H PFC ++C YC F +     + G+E  I  ++  ++    +R+ +G   + +
Sbjct: 2   SDLSLYFHLPFCRRRCRYCSFVT-----QAGREALIPEYVAALEAELRLRRRSGA-VVRT 55

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTPSL   + I  ++  +A  + +    EIT+E NP +VE+  F+G+R AG+NR+
Sbjct: 56  IYFGGGTPSLAGAELIGRLVRAVADEYEIGPGAEITLETNPGTVEMAGFRGFRAAGINRL 115

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG QSL ++ L +LGR H+A     A+  AR   F  +S D IY LP ++   W   L 
Sbjct: 116 SLGAQSLADRELEYLGRTHSADRVGEAVEEARRAGFDNISLDFIYGLPGRSPVDWRRMLA 175

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +   +HLS Y L+I+ GT   +    G       + A D Y          G   YE
Sbjct: 176 DITTLGAEHLSFYGLSIDAGTPLAEAVAAGRDEPVDPDAAADEYESASDCLERAGYLQYE 235

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G ES HNL YW+ G+Y+G+G GAHS       R A S +   + +L+ + +  
Sbjct: 236 ISNWAAPGRESRHNLVYWQGGEYLGLGAGAHSYAD--GRRTANSPDT--DEYLECLVERR 291

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
            A V +E ++ E    E +++GLRL  G+S  D
Sbjct: 292 SAGVFEETITPEMGLSETVILGLRLNRGVSAGD 324


>gi|119025765|ref|YP_909610.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765349|dbj|BAF39528.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 387

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 192/385 (49%), Gaps = 19/385 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           +Y+H PFC+++C YCDFN++          + N+    + EM  +R       +  P+ +
Sbjct: 5   IYIHVPFCLRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMAIVRDWQTTHGINEPK-V 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +++FFGGGTP+ ++  ++  +LD +   W ++ + EIT EANP +V  +  +     G N
Sbjct: 64  ATVFFGGGTPTTLKASDLVAMLDAVRATWGIADDAEITTEANPDTVNADYVKELADGGFN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L  L R H      A I  A     R S DLIY  P +++  W   +
Sbjct: 124 RISFGMQSAVPHVLATLDRTHTPENVAAGIAAANAAGMRSSVDLIYGAPGESLDDWRTSV 183

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V+H+S Y LTI   T   +    G L  P ++   + Y +  ++ +  GL  Y
Sbjct: 184 RTAIDLGVNHISAYALTIAPNTKMGRRIAAGTLSRPDDDDEANKYEIADTMFTEAGLEWY 243

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESWLKMV 308
           EISN +  G ES HNL YWR  D+ G+GPGAHS     + G    +  I  HP  W   +
Sbjct: 244 EISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGDCEDGKGLRSWDI-AHPRLWGTAI 302

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            +        E +++++  +E +M+GLR+REG+  + +  L      IE    L+  G I
Sbjct: 303 NEGNVPWAGSERITADEDIEETIMLGLRIREGLDTRQFSHLIPEQKWIE----LEHDGLI 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
             +   R   T RG  + D++I  L
Sbjct: 359 TMLD-GRAIPTLRGRLLNDTIITEL 382


>gi|154487407|ref|ZP_02028814.1| hypothetical protein BIFADO_01259 [Bifidobacterium adolescentis
           L2-32]
 gi|154083925|gb|EDN82970.1| hypothetical protein BIFADO_01259 [Bifidobacterium adolescentis
           L2-32]
          Length = 387

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 192/385 (49%), Gaps = 19/385 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           +Y+H PFC+++C YCDFN++          + N+    + EM  +R       +  P+ +
Sbjct: 5   IYIHVPFCLRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMAIVRDWQTTHGINEPK-V 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +++FFGGGTP+ ++  ++  +LD +   W ++ + EIT EANP +V  +  +     G N
Sbjct: 64  ATVFFGGGTPTTLKASDLVAMLDAVRATWGIADDAEITTEANPDTVNADYVKELADGGFN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L  L R H      A I  A     R S DLIY  P +++  W   +
Sbjct: 124 RISFGMQSAVPHVLATLDRTHTPENVAAGIAAANAAGMRSSVDLIYGAPGESLDDWHTSV 183

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V+H+S Y LTI   T   +    G L  P ++   + Y +  ++ +  GL  Y
Sbjct: 184 RTAIDLGVNHISAYALTIAPNTKMGRRIAAGTLSRPDDDDEANKYEIADTMFTEAGLEWY 243

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESWLKMV 308
           EISN +  G ES HNL YWR  D+ G+GPGAHS     + G    +  I  HP  W   +
Sbjct: 244 EISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGDCEDGKGLRSWDI-AHPRLWGTAI 302

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            +        E +++++  +E +M+GLR+REG+  + +  L      IE    L+  G I
Sbjct: 303 NEGNVPWAGSERITADEDIEETIMLGLRIREGLDTRQFSHLIPEQKWIE----LEHDGLI 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
             +   R   T RG  + D++I  L
Sbjct: 359 TMLD-GRAIPTLRGRLLNDTIITEL 382


>gi|225021766|ref|ZP_03710958.1| hypothetical protein CORMATOL_01794 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945462|gb|EEG26671.1| hypothetical protein CORMATOL_01794 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 371

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 196/379 (51%), Gaps = 15/379 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
            GVY+H PFC  +C YCDFN++    ++G     +++L  ++   +L    R   +IF G
Sbjct: 2   FGVYIHVPFCSSRCGYCDFNTYTPG-ELGTSASPETYLDALEQELELAEFKRPADTIFIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  IL  I   + ++   EIT E+NP S     F   R AG  RISLG+
Sbjct: 61  GGTPSLLGAQGLRRILTAIRNTFGINPGAEITTESNPESTSPEFFAELRDAGFTRISLGM 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ L R H    A AA+  AR   F  ++ D+IY  P +T    +  +++ ++
Sbjct: 121 QSASAHVLQVLERRHTPGRAFAAVAEARAAGFAHINLDMIYGTPTETDADVQATVEQVIA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VDH+S Y L +E GT   +  + G+L  P E+V  D Y L  +   A G   YE+SN 
Sbjct: 181 SGVDHVSAYSLIVEDGTRMARKVRRGELPAPDEDVYADRYALIDAALVAAGYRWYEVSNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YWR  D+ G GPGAHS   +G  R      KHP ++ + +      V 
Sbjct: 241 AQPGGECRHNLGYWRDEDWWGAGPGAHSH--LGDLR--FYNVKHPATYAQRLASGVLPVA 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
             E L++ Q+ +E +M+GLRLREG+ V  +        D E  +  +  G I+ V    +
Sbjct: 297 GVEKLTAAQRHEERVMLGLRLREGLPVTCFN-------DKELAKAREFPGLID-VSDQWV 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T+ G  + D +IA++ V
Sbjct: 349 TVTEAGRLLADGMIADILV 367


>gi|238759333|ref|ZP_04620499.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia aldovae ATCC 35236]
 gi|238702494|gb|EEP95045.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia aldovae ATCC 35236]
          Length = 333

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/334 (36%), Positives = 187/334 (55%), Gaps = 22/334 (6%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R IS+IF GGGTPSL+  + +  +LDG+     V+++ EIT+EANP +VE + F G
Sbjct: 10  LVNGREISTIFIGGGTPSLLSAEAMQQLLDGVRARLPVATDAEITMEANPGAVEADRFSG 69

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQT 183
           Y++AG+NRIS+GVQS   Q L  LGR H   EAI A  LA ++  R  + DL++ LP QT
Sbjct: 70  YQRAGINRISIGVQSFSAQKLTRLGRIHGPDEAIRAAELATSLNLRSFNLDLMHGLPDQT 129

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +   +L++A++    HLS YQLTIE  T F         VLP ++   D++     + 
Sbjct: 130 LEEALDDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP----VLPDDDALWDIFQQGHQLL 185

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPE 302
           SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP 
Sbjct: 186 SAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPR 245

Query: 303 SWLK---MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDI 356
            +++   + ++   A V++ F        EF M   RL E     D+    G     +  
Sbjct: 246 GFMQGKYLDKQYEVAAVDRPF--------EFFMNRFRLLEAAPRADFTHFTGLAESTIRP 297

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + +  L ++  IE  ++ ++  T++G   L+S++
Sbjct: 298 QLDEALAKEYLIETAEYWQI--TEKGKLFLNSLL 329


>gi|18311018|ref|NP_562952.1| coproporphyrinogen III oxidase [Clostridium perfringens str. 13]
 gi|168208738|ref|ZP_02634363.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens B str. ATCC 3626]
 gi|168212927|ref|ZP_02638552.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens CPE str. F4969]
 gi|18145700|dbj|BAB81742.1| probable coproporphyrinogen III oxidase [Clostridium perfringens
           str. 13]
 gi|170712995|gb|EDT25177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens B str. ATCC 3626]
 gi|170715484|gb|EDT27666.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens CPE str. F4969]
          Length = 377

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/332 (33%), Positives = 187/332 (56%), Gaps = 7/332 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAK-LNMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+EK+  S    + +   AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEKYINS----INEKREAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E    S     +EF+ MGLR   GI   +++
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFK 327


>gi|291532764|emb|CBL05877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megamonas hypermegale ART12/1]
          Length = 314

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 185/318 (58%), Gaps = 14/318 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            G+Y+H PFC +KC YCDF S  ++  +   E +I +   E+   + L     I +I+FG
Sbjct: 3   FGIYIHIPFCKQKCFYCDFASTAKKVDETLYEQYINALCQEITMYQALFPDIYIDTIYFG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++ P  I   L+ +  N+T++S++EIT+EANP +V+    Q   + G+NR+S GV
Sbjct: 63  GGTPSILPPDLIIRALNAVKANFTLNSDIEITLEANPGTVDEQKLQYLYQNGINRLSFGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q++++  L+ +GR H   EA  AI +A+ I F  +S DL+Y LP QT+   EM L+ A+S
Sbjct: 123 QAVQDDLLQKIGRIHTIKEAEMAIEMAQKIGFKNISMDLMYGLPGQTL---EM-LKEAVS 178

Query: 197 YAVD----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AV+    H+S+Y L IE+ T+F +++  G L+LPSE+ +  +Y+        +  + YE
Sbjct: 179 WAVNKNMQHISIYGLQIEENTVFGRLYDQGKLILPSEDESEMMYDYLTEQLPKYNYNRYE 238

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN + +G ES HNL YW+   Y+G+G GAH        +    I++    ++K   +  
Sbjct: 239 ISNFAKIGYESRHNLAYWQDKFYLGLGAGAHGYYNQKRVQNPFDIDE----YIKKCNQKI 294

Query: 313 HAVVEKEFLSSEQQADEF 330
              + +E +  +   +EF
Sbjct: 295 LPFINEEIVDEKAHIEEF 312


>gi|149019365|ref|ZP_01834727.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|147931235|gb|EDK82214.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP23-BS72]
          Length = 376

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 211/376 (56%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  +++++  L E +          +S+++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIEKLSTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+
Sbjct: 62  TPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+ 
Sbjct: 122 FDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIG 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN 
Sbjct: 180 LDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A +
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNACI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQF 373
            ++ LS ++Q +E + +GLR + GIS+  +E   G++   L  E  R+L +QG ++ ++ 
Sbjct: 295 TEDHLSQKEQMEEEMFLGLRKKSGISMARFEEKFGQSFAGLYGEIVRDLVQQGLMQ-IEG 353

Query: 374 SRLRCTQRGMTMLDSV 389
             +R T+RG+ + D+V
Sbjct: 354 DHVRMTKRGLFLGDTV 369


>gi|325677129|ref|ZP_08156798.1| coproporphyrinogen dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325552114|gb|EGD21807.1| coproporphyrinogen dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 395

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 196/392 (50%), Gaps = 23/392 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------ENFIQSFLTEMQWMR 63
           + G G+   G+YVH PFC  +C YCDFN+    Y  G+       ++++++   E+    
Sbjct: 16  LEGVGTRPFGIYVHVPFCATRCGYCDFNT----YTAGELGTSASPQSWLEALKRELASAA 71

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++TG   + ++F GGGTPSL+    +A +L  +  ++ ++   E+T E+NP S     F 
Sbjct: 72  EITGAPKVDTVFVGGGTPSLLGGDGLAEVLGAVQASFGLADGAEVTTESNPESTSPEFFT 131

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+AG  RISLG+QS  E  LR L R H    A+AA   AR   F  ++ DLIY  P +
Sbjct: 132 RLREAGFTRISLGMQSAAEHVLRVLDRTHTPGRAVAAAREARAAGFDHVNLDLIYGTPGE 191

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T    +  L   L   VDH+S Y L +E GT   +  + G+L  P ++V    Y    + 
Sbjct: 192 TDRDLDASLDAVLGAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDAR 251

Query: 243 TSAHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            +  GLH YE+SN +   A    HNL YW  GD+ G GPGAHS V      V     KHP
Sbjct: 252 LADAGLHWYEVSNWAANDASRCRHNLGYWDGGDWWGAGPGAHSHVG----GVRWWNVKHP 307

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +   +      V   E L++E    E +M+ +RLR G+ + D     G +     ER 
Sbjct: 308 ARYADRLSAGELPVGGSETLTAEDAHVERVMLTVRLRTGLPLSD----LGDSERGAAERV 363

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +     + RV+ + L  T RG  + D+V+ ++
Sbjct: 364 VADG--LARVEGAHLVLTDRGRLLADAVVRDI 393


>gi|284042631|ref|YP_003392971.1| oxygen-independent coproporphyrinogen III oxidase [Conexibacter
           woesei DSM 14684]
 gi|283946852|gb|ADB49596.1| oxygen-independent coproporphyrinogen III oxidase [Conexibacter
           woesei DSM 14684]
          Length = 415

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 196/397 (49%), Gaps = 27/397 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQL------ 65
           G    G+YVH PFC  +C YCDFN++      G  N   +  S + E+   R++      
Sbjct: 26  GERPFGIYVHVPFCATRCGYCDFNTYTAEELPGGVNRNSYAASAIAELALARRVLSGGDR 85

Query: 66  -----TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                  P  + ++FFGGGTP+L+  +++A ILD I   + ++   E+T EANP SV   
Sbjct: 86  SGGCTAAPPLVETVFFGGGTPTLLPAEDLAGILDAIDLLFGLAPRAEVTTEANPESVTPA 145

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R AG  RISLG+QS     L  L R H    A AA+  AR   F  +S DLIY  
Sbjct: 146 TLATLRAAGFTRISLGMQSAVGHVLDVLDRTHTPGRAAAAVAEARAAGFEHVSLDLIYGT 205

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    W   ++ AL  A DH+S Y LT+E GT  +   + G+L  P E+   D Y + 
Sbjct: 206 PGERDADWRASVETALGAAPDHVSAYALTVEPGTRLHARVQRGELPSPDEDALADRYAIA 265

Query: 240 QSITSAHGLHAYEISNHSFLGAES---LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
               +A GL  YEISN  + G+E     HN+NYWR GD+ G+GPGAHS   VG  R    
Sbjct: 266 DEAFAAAGLRWYEISN--WAGSEPARCAHNVNYWRGGDWWGVGPGAHS--HVGGVRWWNV 321

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           +  HP ++   + +       +E L +E +  E +M+  RL EG+   D  +L       
Sbjct: 322 L--HPSAYATALAERRSPAAGREQLDAETRRFERIMLETRLSEGL---DAALLREDGRAA 376

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                 +     E +   R+R T+RG  + D+V+ +L
Sbjct: 377 AARAADEGLAEPEALAEGRVRLTRRGRLLADAVVRDL 413


>gi|229916350|ref|YP_002884996.1| coproporphyrinogen III oxidase [Exiguobacterium sp. AT1b]
 gi|229467779|gb|ACQ69551.1| oxygen-independent coproporphyrinogen III oxidase [Exiguobacterium
           sp. AT1b]
          Length = 384

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 193/377 (51%), Gaps = 14/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN    + +   ++++ +   EM    +      I +IF GGG
Sbjct: 4   AVYLHIPFCEHICYYCDFNKVFLKNQ-PVDDYLDALKREMVLTLEAFPTERIDTIFIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+ +  + +A ++D + ++     S ++E ++EANP+ V        +  GVNR+S GV
Sbjct: 63  TPTALNEEQMARLMDMVRQHLLPLASDDLEYSVEANPNFVSAEKLDTMKAGGVNRLSFGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ ++  L  +GR H A +    +  A   F  +S DL++ LP+QT+ Q + +L  AL  
Sbjct: 123 QTFDDGGLERIGRTHRADDVFETVSEAAKRFDNISIDLMFGLPEQTLEQIDRDLALALQL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E  T+F    + G L LP E+V V++Y         HGL  YEISN+ 
Sbjct: 183 PIQHVSSYSLILEPHTVFAIQDRKGKLRLPGEDVEVEMYLKVMETLERHGLKQYEISNYG 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YWR  +Y G G GAHS +  G+ R  I+   H       ++  G  V  
Sbjct: 243 LPGRESRHNQVYWRNEEYYGFGAGAHSYLN-GTRRANIAPIPH------YIKAEGIPVKR 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              L   ++ +E L +GLR+R G+S++ +E   G +LD         L ++  IER   +
Sbjct: 296 VTELEEVEKMEEELFLGLRMRSGVSLQTFEQKYGVSLDDVFGHVIEELVKKSLIERTD-T 354

Query: 375 RLRCTQRGMTMLDSVIA 391
            +R T  G+ + +   A
Sbjct: 355 HIRLTASGLPLANEAFA 371


>gi|168483965|ref|ZP_02708917.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1873-00]
 gi|172042779|gb|EDT50825.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1873-00]
 gi|332201860|gb|EGJ15930.1| radical SAM superfamily protein [Streptococcus pneumoniae GA47368]
          Length = 376

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 211/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +          +S+++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIEKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNACIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
           ++ LS ++Q +E + +GLR + G+S+  +E   G++   L  E  R+L +QG ++ ++  
Sbjct: 296 EDHLSQKEQMEEEMFLGLRKKSGVSMARFEKKFGQSFAGLYGEIVRDLVQQGLMQ-IEGD 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+RG+ + D+V
Sbjct: 355 HVRMTKRGLFLGDTV 369


>gi|260174169|ref|ZP_05760581.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
          Length = 376

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 197/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++++   E+   +       I +++FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTRYVRALCRELAMRKDYLKGEDIETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I  ++ +S   EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIRTHYGLSHCQEITLEANPDDLTSEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI A+H  R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDPTLKLLKRRHNAHTAIEAVHRCREAGFQNISIDLIYGLPGETKERWENDLRQAVSLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ ++D + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + +N  A  E 
Sbjct: 241 PGKYSRHNSSYWKGIPYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEENSRA-FEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C+R      + G +E      
Sbjct: 296 EYLDQTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQRMAAPYLKNGKLEEHD-GA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|261367283|ref|ZP_05980166.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
 gi|282570886|gb|EFB76421.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
          Length = 356

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 195/382 (51%), Gaps = 33/382 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +S G+Y+H P+C  KC YCDF S      V Q  ++ + L E++  R     R   +++F
Sbjct: 2   DSFGIYLHIPYCKSKCRYCDFYSAPGALGVPQP-YVDALLRELEKNR-----RRPDTLYF 55

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  +++++  +          EIT+EANP +V   + QG+R AGV RIS G
Sbjct: 56  GGGTPALLSPAQVSILIQAV----NPLPGSEITLEANPDAVTPQSLQGFRAAGVTRISFG 111

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS ++  L+ LGR H A+ A  A+  AR   FP +  D++ ALP  +  +++  L    
Sbjct: 112 VQSADDVQLKRLGRTHTAAGAAEALQWARQAGFPEICGDIMLALPNYSNAEFDATLDLLQ 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                H+S Y L IE GT F K   DG   LP  + A D Y       +  G   YEISN
Sbjct: 172 QGGCTHISAYLLKIEPGTAFAKFPPDG---LPGPDEAADFYLYAVKRLAEAGYQQYEISN 228

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK--NGH 313
            S  G E  HNL YW   DY G+GP AHS ++        ++ ++   W   V+   +G 
Sbjct: 229 FSRPGHEGRHNLLYWNCRDYRGVGPAAHSCIQ--------NVRRY---WPDDVQSFLDGR 277

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERV 371
           AV ++E    +  A++FL+M LRL  G+ + ++    G     +    R+    G+    
Sbjct: 278 AVEQEE---GQCDAEDFLLMQLRLNRGLDLDEYAQWGGHFTKAQMAFLRHCVASGY-ALF 333

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
             SRLR T  GM + ++++  L
Sbjct: 334 DGSRLRLTPSGMIVQNAILEAL 355


>gi|256787818|ref|ZP_05526249.1| coproporphyrinogen III oxidase [Streptomyces lividans TK24]
          Length = 410

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  R
Sbjct: 22  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLVDEVRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+   
Sbjct: 82  KVLGDDPREVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAPDAEITTEANPESVDPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R  G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 142 LATLRAGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 202 GESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 EALSAAGYDWYEVSNWATSDAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E L+ E +  E +++ LRLREG+ +    +L  R   +   
Sbjct: 318 HPGAYAGALAAGKSPGAGREILTDEDRRVERILLELRLREGVPLS---LL--REAGLAAS 372

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R    +G ++   +       T RG  + D+V+ +L
Sbjct: 373 RRALSEGLLQEGPYEAGSAVLTLRGRLLADAVVRDL 408


>gi|157693050|ref|YP_001487512.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032]
 gi|157681808|gb|ABV62952.1| coproporphyrinogen dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 379

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 190/376 (50%), Gaps = 11/376 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   E ++ +   EMQ   +  G + + +IF GGG
Sbjct: 3   AAYIHIPFCEHICHYCDFNKFFIKTQPVDE-YLAALEKEMQHTIEQKGEQELKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  +++ I +    S N VE  +EANP  + +      ++AGVNR+S GVQ
Sbjct: 62  TPTSLTVSQLDQLMNSIHRVLKPSKNLVEFAVEANPDELSLEKLHVLKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L+ +GR H   + + +   AR++ F  +S DL++ LP Q        L+ A S 
Sbjct: 122 TFEDDLLKKIGRVHQKKDVLTSFERARDVGFDNISLDLMFGLPHQEKHHVMNSLETAFSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y L       HGLH YEISN++
Sbjct: 182 GAEHYSVYSLIVEPKTVFYNLMQKGKLHLPPQEREAEMYELVMDEMERHGLHQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  V  G   V     KH   +L+++ + G    E
Sbjct: 242 KPGFESQHNLTYWSNEDYFGFGAGAHGYVD-GIRNVNAGPVKH---YLELIEQTGFPHKE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
              ++  +Q +E + +GLR  EG+    ++   G +   L       L+ +G I +    
Sbjct: 298 THQVTKAEQIEEEMFLGLRKIEGVKSAGFQAKYGASPEALFPSVLEELEEKGLIVKDDIG 357

Query: 375 RLRCTQRGMTMLDSVI 390
            +R T++G  + + V 
Sbjct: 358 -IRLTRKGKLLGNEVF 372


>gi|332292055|ref|YP_004430664.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332170141|gb|AEE19396.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 377

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 202/380 (53%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF  H       +E  I + ++E++  +       +S+++FGGG
Sbjct: 3   SIYIHIPFCKQACHYCDF--HFSTTMGKKEEMITAIMSELEMRKAEFENDEVSNVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    I  I+D    ++T+  N EIT+EANP  +          + +NR+S+GVQS
Sbjct: 61  TPSVLNTVEIEQIIDACYTHYTIEENPEITLEANPDDLIPEKISELAASRINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA+EAI  + L+R  FP  S DLIY +P  T  +WE  + +AL   V
Sbjct: 121 FFEEDLKLMNRAHNATEAIDCLVLSRKQFPNSSLDLIYGIPGMTNERWEENIDQALKLDV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHGLHAYEISNHSF 258
            H+S Y LT+E  T      K G +VLP E+ VA + + L        G   YE SN + 
Sbjct: 181 PHISAYALTVEPKTALENFIKKG-IVLPVEDEVAQEHHELLIRKMEEAGYENYEFSNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N  YW+   YIGIGP AHS     ++R A +I  +P+ ++K +   G    E 
Sbjct: 240 PGFHSRNNTAYWQGKKYIGIGPSAHS---YDNNRRAWNINNNPK-YIKAITA-GELPQEV 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSR 375
           E LS   Q +E++M  LR + G+S+ +   L G   ++  IE  +    +  +  ++  R
Sbjct: 295 EELSLTDQYNEYVMTRLRTQFGVSLTEIATLYGDKYKDYFIEYSQKHVEEHLL-FIEGDR 353

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  +++G  + D + ++L +
Sbjct: 354 VYVSKKGKFLSDGIASDLFI 373


>gi|255011282|ref|ZP_05283408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 3_1_12]
 gi|313149093|ref|ZP_07811286.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313137860|gb|EFR55220.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
          Length = 377

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 198/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R  + G  ++I++   E++          I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSERKG--HYIEALCKELEMRYTYLKGEPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEEDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEYVQMLSRLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L  L R HNA++AI A+ L R   F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDATLTLLKRRHNATQAIRAVELCRTYGFRNISIDLIYGLPGETAERWERDLQQAVALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  Y+M +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHVSAYHLIYEEGTPIYRMLQKHQVEEVDEDSSVRFFTLLMDRLQEAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGTSYLGCGPSAHSFDGATREWNCSSIEKYIAGI-----ESGKRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C    R     G +E +    
Sbjct: 296 EERDLTTRYNEFVITSVRTQWGISLERLRNDYGTELEQYCLKMARPSLENGKLE-IHEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|21221018|ref|NP_626797.1| coproporphyrinogen III oxidase [Streptomyces coelicolor A3(2)]
 gi|6714773|emb|CAB66237.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces coelicolor A3(2)]
          Length = 435

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  R
Sbjct: 47  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLVDEVRLAR 106

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+   
Sbjct: 107 KVLGDDPREVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAPDAEITTEANPESVDPAY 166

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R  G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 167 LATLRAGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 226

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 227 GESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 286

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 287 EALSAAGYDWYEVSNWATSDAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 342

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E L+ E +  E +++ LRLREG+ +    +L  R   +   
Sbjct: 343 HPGAYAGALAAGKSPGAGREILTDEDRRVERILLELRLREGVPLS---LL--REAGLAAS 397

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R    +G ++   +       T RG  + D+V+ +L
Sbjct: 398 RRALSEGLLQEGPYEAGSAVLTLRGRLLADAVVRDL 433


>gi|297194439|ref|ZP_06911837.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718752|gb|EDY62660.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 413

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G  +  L  Y+H P+C  +C YCDFN++      G       ++N+ Q+   E++  R
Sbjct: 25  LHGAEARPLAFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYAQTLADEVRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +LD + + + ++ + EIT EANP SV+   
Sbjct: 85  KVLGDDPRPVRTVFVGGGTPTLLAAGDLVRMLDVVRQEFGLADDAEITTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LAALREGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +  
Sbjct: 205 GESDDDWRASLEAAVGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAD 264

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            +  A G   YE+SN  +      LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EVLGAAGFDWYEVSNWATSPEGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E L+ E +  E +++ LRLREG+ +    +L  R   +   
Sbjct: 321 HPGAYAAALAQGRSPGAGREILADEDRRVERILLELRLREGVPLS---LL--REAGLAAA 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
                 G +E   +   R   T RG  + D V+ +L
Sbjct: 376 ARSLADGLLEPAPYEAGRAVLTLRGRLLADGVVRDL 411


>gi|311069151|ref|YP_003974074.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
 gi|310869668|gb|ADP33143.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
          Length = 379

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 189/376 (50%), Gaps = 11/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ S   EM      TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNSLEKEMINTVAKTGQPKLDTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +    +  ++D + +    SS + E  +EANP  +     +  + AGVNR+S GVQ+
Sbjct: 63  PTSLSEAQLEKLMDIVHRVLKPSSPLPEFAVEANPDDLSAEKLKVLKDAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L+ +GR H   +   +   AR + F  +S DL++ LP QT+   +  LQ ALS  
Sbjct: 123 FEDDLLKKIGRVHKKKDVFTSFERARALGFENISLDLMFGLPGQTLEHLDQSLQTALSLN 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP+++   ++Y L     S   +H YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQDQEAEMYELVMRQMSDANIHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   DY G G GAH  +  G   V     KH   ++ ++ + G    + 
Sbjct: 243 PGLESKHNLTYWSNEDYFGFGAGAHGYIN-GVRTVNAGPVKH---YIDLINEKGFPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             ++ E+Q +E L +GLR   G+S K +    G +LD       R L  +G I   + S 
Sbjct: 299 HEVTKEEQIEEELFLGLRKTAGVSKKRFFEKYGCSLDELFAHVLRGLSDKGLIHNTE-SS 357

Query: 376 LRCTQRGMTMLDSVIA 391
           +  T  G  + + V  
Sbjct: 358 VSLTHNGKLLGNEVFG 373


>gi|194397558|ref|YP_002038057.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae G54]
 gi|194357225|gb|ACF55673.1| Oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae G54]
          Length = 376

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 211/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +          +S+++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIEKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIEL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNACIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
           ++ LS ++Q +E + +GLR + G+S+  +E   G++   L  E  R+L +QG ++ ++  
Sbjct: 296 EDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLMQ-IEGD 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+RG+ + D+V
Sbjct: 355 HVRMTKRGLFLGDTV 369


>gi|15901263|ref|NP_345867.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae TIGR4]
 gi|15903309|ref|NP_358859.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae R6]
 gi|111658602|ref|ZP_01409259.1| hypothetical protein SpneT_02000277 [Streptococcus pneumoniae
           TIGR4]
 gi|116517056|ref|YP_816707.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae D39]
 gi|148985636|ref|ZP_01818790.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|148993031|ref|ZP_01822625.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|148997537|ref|ZP_01825142.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|149002799|ref|ZP_01827725.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|149007321|ref|ZP_01830979.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|149011651|ref|ZP_01832847.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|168489574|ref|ZP_02713773.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae SP195]
 gi|168491313|ref|ZP_02715456.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC0288-04]
 gi|168493313|ref|ZP_02717456.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC3059-06]
 gi|168575868|ref|ZP_02721783.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae MLV-016]
 gi|169832786|ref|YP_001694844.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182684367|ref|YP_001836114.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CGSP14]
 gi|221232149|ref|YP_002511302.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854856|ref|YP_002736368.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae JJA]
 gi|225859174|ref|YP_002740684.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae 70585]
 gi|225860811|ref|YP_002742320.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237650006|ref|ZP_04524258.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CCRI 1974]
 gi|237822444|ref|ZP_04598289.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|298229578|ref|ZP_06963259.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255450|ref|ZP_06979036.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502640|ref|YP_003724580.1| coproporphyrinogen dehydrogenase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303254564|ref|ZP_07340668.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS455]
 gi|303259005|ref|ZP_07344984.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae SP-BS293]
 gi|303261689|ref|ZP_07347636.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264358|ref|ZP_07350278.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS397]
 gi|303265843|ref|ZP_07351740.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS457]
 gi|303268176|ref|ZP_07353975.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS458]
 gi|307068062|ref|YP_003877028.1| coproporphyrinogen III oxidase-like Fe-S oxidoreductases
           [Streptococcus pneumoniae AP200]
 gi|307127022|ref|YP_003879053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae 670-6B]
 gi|14972898|gb|AAK75507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae TIGR4]
 gi|15458906|gb|AAL00070.1| Coproporphyrinogen III oxidase [Streptococcus pneumoniae R6]
 gi|116077632|gb|ABJ55352.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae D39]
 gi|147756592|gb|EDK63633.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|147759093|gb|EDK66087.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|147761125|gb|EDK68093.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|147764082|gb|EDK71014.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|147922117|gb|EDK73239.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|147928232|gb|EDK79249.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|168995288|gb|ACA35900.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae Hungary19A-6]
 gi|182629701|gb|ACB90649.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CGSP14]
 gi|183571920|gb|EDT92448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae SP195]
 gi|183574460|gb|EDT94988.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC0288-04]
 gi|183576670|gb|EDT97198.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC3059-06]
 gi|183578187|gb|EDT98715.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae MLV-016]
 gi|220674610|emb|CAR69173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae ATCC 700669]
 gi|225720284|gb|ACO16138.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae 70585]
 gi|225722950|gb|ACO18803.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae JJA]
 gi|225727090|gb|ACO22941.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238235|gb|ADI69366.1| coproporphyrinogen dehydrogenase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301794449|emb|CBW36883.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae INV104]
 gi|301800274|emb|CBW32894.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae OXC141]
 gi|301802150|emb|CBW34887.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae INV200]
 gi|302598532|gb|EFL65574.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS455]
 gi|302637269|gb|EFL67757.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639948|gb|EFL70404.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae SP-BS293]
 gi|302642255|gb|EFL72603.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS458]
 gi|302644578|gb|EFL74828.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS457]
 gi|302646170|gb|EFL76397.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS397]
 gi|306409599|gb|ADM85026.1| Coproporphyrinogen III oxidase-like Fe-S oxidoreductases
           [Streptococcus pneumoniae AP200]
 gi|306484084|gb|ADM90953.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae 670-6B]
 gi|327389595|gb|EGE87940.1| radical SAM superfamily protein [Streptococcus pneumoniae GA04375]
 gi|332073716|gb|EGI84195.1| radical SAM superfamily protein [Streptococcus pneumoniae GA17570]
 gi|332074732|gb|EGI85206.1| radical SAM superfamily protein [Streptococcus pneumoniae GA17545]
 gi|332074990|gb|EGI85462.1| radical SAM superfamily protein [Streptococcus pneumoniae GA41301]
 gi|332200851|gb|EGJ14923.1| radical SAM superfamily protein [Streptococcus pneumoniae GA41317]
 gi|332203239|gb|EGJ17307.1| radical SAM superfamily protein [Streptococcus pneumoniae GA47901]
          Length = 376

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 211/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +          +S+++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIEKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNACIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
           ++ LS ++Q +E + +GLR + G+S+  +E   G++   L  E  R+L +QG ++ ++  
Sbjct: 296 EDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLMQ-IEGD 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+RG+ + D+V
Sbjct: 355 HVRMTKRGLFLGDTV 369


>gi|225857044|ref|YP_002738555.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae P1031]
 gi|225725889|gb|ACO21741.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae P1031]
          Length = 376

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 211/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +          +S+++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIEKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNYGPI-RH---YLSAVEE-GNACIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
           ++ LS ++Q +E + +GLR + G+S+  +E   G++   L  E  R+L +QG ++ ++  
Sbjct: 296 EDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLMQ-IEGD 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+RG+ + D+V
Sbjct: 355 HVRMTKRGLFLGDTV 369


>gi|258424011|ref|ZP_05686893.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9635]
 gi|257845632|gb|EEV69664.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9635]
          Length = 385

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 174/322 (54%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +  A++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYASVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVS 328


>gi|332701625|ref|ZP_08421713.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551774|gb|EGJ48818.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 464

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/392 (33%), Positives = 194/392 (49%), Gaps = 14/392 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
           + T     +L +YVH PFC  KC YC F+S        +  E + ++   EM+   Q  G
Sbjct: 49  DTTNPKQPALLLYVHVPFCRSKCRYCAFHSVPLTMDSMEDMERYAEAVAREMKLWGQRLG 108

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                +++FGGGTPS++    +  I+  +  ++ +S   E T EANP SV +N  +  R 
Sbjct: 109 KPPAHTVYFGGGTPSVLPEYALERIMRALRDSFDLSGCQEFTFEANPDSVHLNYLRELRD 168

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNR+SLGVQSL    L FLGR HNA +A+ A H AR   F  +S D I+ LP+Q    
Sbjct: 169 FGVNRLSLGVQSLNNDELTFLGRPHNALQAVQAFHTARAAGFGNVSLDFIWGLPRQNAAS 228

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L++A     +HLS Y LTIE  T      + G L+LP E++    Y         H
Sbjct: 229 WIKTLKKAEELRPEHLSCYGLTIEPNTPLEAEEQAGTLILPGEDMLAKCYIYGAQFLEEH 288

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEIS+ + +G  S HN+ YW   DY+G GP A S    G  R     + H   ++ 
Sbjct: 289 GYLQYEISSFARMGYASKHNMGYWAGSDYLGFGPAAVS--TFGGRRWTNPTDMH--DYVF 344

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----L 362
            V   G     +E L    +  E +M+ LR  +G+ +++ +   G +  +E  R     L
Sbjct: 345 QVDAGGTGKRAEE-LDEATRLRERIMLALRTTQGLDLREHDKRTGGSF-LERHRKLVTLL 402

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  G I R+    L  T+ GM + D++I  LA
Sbjct: 403 RNNGLI-RLSKGSLSLTRTGMLVSDTIIEKLA 433


>gi|289771705|ref|ZP_06531083.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           lividans TK24]
 gi|289701904|gb|EFD69333.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           lividans TK24]
          Length = 413

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  R
Sbjct: 25  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLVDEVRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+   
Sbjct: 85  KVLGDDPREVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAPDAEITTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R  G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LATLRAGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 205 GESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 264

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EALSAAGYDWYEVSNWATSDAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E L+ E +  E +++ LRLREG+ +    +L  R   +   
Sbjct: 321 HPGAYAGALAAGKSPGAGREILTDEDRRVERILLELRLREGVPLS---LL--REAGLAAS 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R    +G ++   +       T RG  + D+V+ +L
Sbjct: 376 RRALSEGLLQEGPYEAGSAVLTLRGRLLADAVVRDL 411


>gi|110803276|ref|YP_699317.1| coproporphyrinogen III oxidase [Clostridium perfringens SM101]
 gi|110683777|gb|ABG87147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens SM101]
          Length = 377

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 188/332 (56%), Gaps = 7/332 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLESDELEYLLKEVAK-LNMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQKLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENNKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  + S +     +   S+E++  S    + + G A+
Sbjct: 240 YAKKGKECRHNLAYWNMDNWIGVGSASASYMDGKRIKNISSVEEYINS----INEKGEAI 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E    S     +EF+ MGLR   GI   +++
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFK 327


>gi|50842395|ref|YP_055622.1| coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202]
 gi|282854145|ref|ZP_06263482.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J139]
 gi|50839997|gb|AAT82664.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes KPA171202]
 gi|282583598|gb|EFB88978.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J139]
          Length = 393

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDFN++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 20  IYLHVPFCASRCGYCDFNTYVLS-AMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIF 78

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 79  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 139 GMQSADENVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENRDSWRYSLDAT 198

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 199 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 258

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 259 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLDD 314

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 315 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 366

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 367 GTMEEGRLVLNLSGRMVADRIITDLLV 393


>gi|312140297|ref|YP_004007633.1| oxygen-independent coproporphyrinogen-iii oxidase hemn [Rhodococcus
           equi 103S]
 gi|311889636|emb|CBH48953.1| oxygen-independent coproporphyrinogen-III oxidase HemN [Rhodococcus
           equi 103S]
          Length = 395

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 196/392 (50%), Gaps = 23/392 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------ENFIQSFLTEMQWMR 63
           + G G+   G+YVH PFC  +C YCDFN+    Y  G+       ++++++   E+    
Sbjct: 16  LEGVGTRPFGIYVHVPFCATRCGYCDFNT----YTAGELGTSASPQSWLEALKRELASAA 71

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++TG   + ++F GGGTPSL+    +A +L  +  ++ ++   E+T E+NP S     F 
Sbjct: 72  EITGAPKVDTVFVGGGTPSLLGGDGLAEVLGAVQASFGLADGAEVTTESNPESTSPEFFT 131

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+AG  RISLG+QS  E  LR L R H    A+AA   AR   F  ++ DLIY  P +
Sbjct: 132 RLREAGFTRISLGMQSAAEHVLRVLDRTHTPGRAVAAAREARAAGFDHVNLDLIYGTPGE 191

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T    +  L   L   VDH+S Y L +E GT   +  + G+L  P ++V    Y    + 
Sbjct: 192 TDRDLDASLDAVLGAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDAR 251

Query: 243 TSAHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            +  GLH YE+SN +   A    HNL YW  GD+ G GPGAHS V      V     KHP
Sbjct: 252 LADAGLHWYEVSNWAANDASRCRHNLGYWDGGDWWGAGPGAHSHVG----GVRWWNVKHP 307

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +   +      V   E L++E    E +M+ +RLR G+ + D     G +     ER 
Sbjct: 308 ARYADRLWAGELPVGGSETLTAEDAHVERVMLTVRLRTGLPLSD----LGDSERGAAERV 363

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +     + RV+ + L  T RG  + D+V+ ++
Sbjct: 364 VADG--LARVEGAHLVLTDRGRLLADAVVRDI 393


>gi|229824134|ref|ZP_04450203.1| hypothetical protein GCWU000282_01438 [Catonella morbi ATCC 51271]
 gi|229786488|gb|EEP22602.1| hypothetical protein GCWU000282_01438 [Catonella morbi ATCC 51271]
          Length = 390

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 195/385 (50%), Gaps = 25/385 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             Y+H PFC K C YC FN   + +  GQ   +++ S   EM     L   + + +++ G
Sbjct: 5   AAYIHIPFCKKICHYCAFN---KFFYDGQPVGDYLASLDQEMA-AYDLDQKQPLDTLYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +    +  +L  I +   ++   E + E NP  + +   +  +  GVNRIS+GV
Sbjct: 61  GGTPSCLSLSELDYLLASIHRRLPLTDKTEFSFEINPGELSLEKCRLLKDQGVNRISMGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ LR +GRNH   +   +I   R + F  +S DLI+ LP+QT+  ++  L +ALS
Sbjct: 121 QTFNDRLLRKIGRNHREKQIYQSIDWFRQVGFDNLSIDLIFRLPEQTLADFDESLTKALS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H SLY L IE  T+F ++ + G L LPSE+V  D++ L        G+  YE+SN 
Sbjct: 181 LDLPHYSLYSLIIENQTVFQQLMRQGKLPLPSEDVDADMFQLAIDRLREAGIEQYEVSNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YWRY  Y G G GAH  +  G+         H   +LK +R     ++
Sbjct: 241 AKPGFESQHNLGYWRYTPYYGFGAGAHGFLD-GTRYYNHGPVHH---YLKQLRAGNKPII 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW--------EMLAGRNLDIECERNLQRQGFI 368
           +   L    Q +EFL + LR  +G+ + D+        E+L       + ER L     I
Sbjct: 297 DASPLDLVDQMEEFLFLALRTTQGVCLTDFYDRFGHRAEVLFADFFRQQAERGL----LI 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
           E  + +R+  T RG+ + D V  +L
Sbjct: 353 E--ESNRIYLTTRGLFLADLVFRDL 375


>gi|52081099|ref|YP_079890.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52786477|ref|YP_092306.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|319644944|ref|ZP_07999177.1| HemN protein [Bacillus sp. BT1B_CT2]
 gi|52004310|gb|AAU24252.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52348979|gb|AAU41613.1| HemN [Bacillus licheniformis ATCC 14580]
 gi|317392753|gb|EFV73547.1| HemN protein [Bacillus sp. BT1B_CT2]
          Length = 379

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 177/338 (52%), Gaps = 7/338 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   E +++S   EM    + TG   + +IF GGG
Sbjct: 3   AAYIHIPFCEHICHYCDFNKFFIQSQPVDE-YLRSLEKEMANSMEATGHPELKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  +LD I +    S ++ E  +EANP  +        + AGV+R+S GVQ
Sbjct: 62  TPTSLSAAQLERLLDSIHRVLKPSESLAEFAVEANPDDLSAEKLDVLKAAGVDRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E++ L+ +GR H   + + +   AR   F  +S DL++ LP QT+      L  AL+ 
Sbjct: 122 TFEDELLKKIGRVHEQKDVLVSFERARKAGFDNISLDLMFGLPGQTIGHLASSLDTALAL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + K G L LP ++   ++Y L        G+  YEISN++
Sbjct: 182 GAEHYSVYSLIVEPKTVFYNLMKKGRLHLPPQDQEAEMYELVMRKMEEAGIGQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  +  G   V     KH   ++ ++ ++G    E
Sbjct: 242 KKGYESKHNLTYWNNEDYFGFGAGAHGYIN-GERTVNAGPVKH---YIDLIEQSGFPYKE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           K  ++  +Q +E + +GLR  EG++ + +    GR++D
Sbjct: 298 KHMVTKNEQIEEEMFLGLRKTEGVNKERFFETYGRSVD 335


>gi|88705473|ref|ZP_01103184.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
 gi|88700563|gb|EAQ97671.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
          Length = 394

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/379 (34%), Positives = 195/379 (51%), Gaps = 19/379 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH P+C +KCPYCDFNSH     + +  +I + + ++Q        R I ++F GG
Sbjct: 6   LGLYVHLPWCERKCPYCDFNSH-EASVIPEAAYIDTLILDLQAEIN-DQRREIDTMFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL     I  +++ + K+  ++   E+T+EANP SVE    +GY +AGV R SLG+Q
Sbjct: 64  GTPSLFSVDAIGRLMEAV-KSAGLAKGAEVTMEANPGSVEAGRLKGYAEAGVTRFSLGIQ 122

Query: 139 SLEEQSLRFLGRNHNAS-EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S    +L+ LGR H+      AA     +     + DL++ LP QT+ +   +++ AL+ 
Sbjct: 123 SFSNGALQALGRIHDGEMARRAAAAAQGSGAASYNIDLMHGLPAQTLGEGLNDIRTALAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  HLS YQLTIE  T FY         LP +++   L      +  + G H YE+S  +
Sbjct: 183 SPPHLSWYQLTIEPNTRFYSQPP----RLPEDSILGSLEEEGCRVLQSAGYHRYEVSAWA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVV 316
             G E  HNLNYWR+GDY+ IG GAH ++      V   +  + P+ +L      G    
Sbjct: 239 RPGEECQHNLNYWRFGDYLAIGAGAHGKLSTAQGEVFRYAKTRQPDDYLA---AGGRERR 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQ 372
               L S  +  EF++  LRL +G S+  +E   G  LD +  R     L   G + R  
Sbjct: 296 NLRTLDSADRQGEFMLNALRLAKGFSLTLFEARTG--LDADRVRPTIDELADLGLLTR-D 352

Query: 373 FSRLRCTQRGMTMLDSVIA 391
             ++R T  G   LD V+A
Sbjct: 353 GEQVRTTDLGRRFLDDVVA 371


>gi|241667769|ref|ZP_04755347.1| coproporphyrinogen dehydrogenase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876313|ref|ZP_05249023.1| coproporphyrinogen III oxidase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842334|gb|EET20748.1| coproporphyrinogen III oxidase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 380

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 197/379 (51%), Gaps = 17/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H+P+CV+KCPYCDFNSH ++      +++ +  + +          R + SIF G
Sbjct: 8   IGIYIHFPWCVRKCPYCDFNSHAIKDDTYLSQDYYKKLIADFDTHLTDLQDREVISIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   +  +L  I  N  ++ N EIT+E NP +VE  +   Y   G++RIS+GV
Sbjct: 68  GGTPSLFKADYLGKVLQHIKDNSKLNPNCEITLEMNPGTVERGSISDYANIGISRISVGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L+ LGR HN       I   +N      + D+++ LP Q+      ++ +A++
Sbjct: 128 QSFQNKKLQLLGRIHNCDNVYTTIEEIKNSRISNFNIDIMHGLPNQSFEDGIFDISQAIA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP E     +    + +    G + YEIS +
Sbjct: 188 MQPTHISWYQLTIEPNTLFAAKPPK----LPDEETLEQIEITGKKLLQQAGYYQYEISAY 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           +     S+HN NYW +GDYIGIG GAHS++  + +  +  + + KHP    K+  +  + 
Sbjct: 244 AKDNLRSIHNSNYWNFGDYIGIGAGAHSKITNLQTKEIKRTWKHKHP----KIYSQADNF 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           + +   +S +    EF++  LRLR+G S   +E     + D   + NLQ    +G + +V
Sbjct: 300 IKDSNVVSQDDLVYEFMLNTLRLRDGFSFDLFERQTFLSKDT-IQNNLQVAIDRGLL-KV 357

Query: 372 QFSRLRCTQRGMTMLDSVI 390
               ++ T +G   L+  I
Sbjct: 358 NKDNVKPTDKGYLFLNDCI 376


>gi|251778618|ref|ZP_04821538.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243082933|gb|EES48823.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 379

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 203/385 (52%), Gaps = 22/385 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           + +Y+H PFC +KC YCDF S+      G+E FI  ++  + + ++       I SIF G
Sbjct: 9   ISLYIHIPFCKQKCLYCDFPSYS-----GKEKFISGYMGALNKEIKDKASSYKIKSIFIG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS ++   +  +L  I    T+  N+E TIE NP S+  +  +  +K  VNRIS+G+
Sbjct: 64  GGTPSYLDEIELEKLLKCI-NTLTLGENLEFTIECNPGSLSEDKLKIMKKYNVNRISMGL 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ +GR H   E      LAR + F  ++ DL++ LP Q++  W   L++ + 
Sbjct: 123 QSTKPSLLKEIGRIHTFEEFENNYLLARKVGFKNINIDLMFGLPNQSVEDWRKTLEKIIE 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +H+S Y L IE+GT FY ++    L LPSE    D+Y LT+ I   +G   YEISN 
Sbjct: 183 FNPEHISAYSLIIEEGTCFYNLYNQDKLNLPSEEKERDMYLLTKKILKENGYSQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    E  HN+ YW+  +Y+G+G  + S ++    +    IE      L +   N +  V
Sbjct: 243 SKDKKECYHNIVYWQLNEYLGLGVSSSSYIEGKRIKNIDDIE------LYIKNINSNQSV 296

Query: 317 EKEFLSSEQQAD--EFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIER 370
           E E   +    D  EF+ MGLR+  GI  +D++    +++D        +N++++  I  
Sbjct: 297 ENEIYENNINDDMEEFMFMGLRMIRGIEERDFKERFKKDIDEVYGDVIYKNIKQELLIRN 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+  T RG+ + +SV+++  +
Sbjct: 357 G--GRIYLTSRGIEVSNSVMSDFII 379


>gi|314923123|gb|EFS86954.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL001PA1]
 gi|314966890|gb|EFT10989.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL082PA2]
 gi|314981234|gb|EFT25328.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA3]
 gi|315091802|gb|EFT63778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA4]
 gi|315093189|gb|EFT65165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL060PA1]
 gi|315103305|gb|EFT75281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA2]
 gi|315105512|gb|EFT77488.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL030PA1]
 gi|327327714|gb|EGE69490.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL103PA1]
          Length = 397

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDFN++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 24  IYLHVPFCASRCGYCDFNTYVLS-AMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIF 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 83  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 143 GMQSADENVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENRDSWRYSLDAT 202

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 203 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 262

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 263 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLDD 318

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 319 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 370

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 371 GTMEEGRLVLNLSGRMVADRIITDLLV 397


>gi|294501306|ref|YP_003565006.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium QM B1551]
 gi|294351243|gb|ADE71572.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium QM B1551]
          Length = 379

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/341 (34%), Positives = 178/341 (52%), Gaps = 16/341 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSISSI 74
             Y+H PFC   C YCDFN      KV  +N     +++S   EM+   +     ++++I
Sbjct: 4   AAYLHIPFCHHICHYCDFN------KVFFKNQPVMPYLESMREEMKQAVEHYPTTNLNTI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ ++ Q +   L+ I          E T EANP+ +     Q     GVNR+S
Sbjct: 58  FVGGGTPTALDEQQLEYFLESIRMYLPYDEKGEFTFEANPNELTKEKLQLLHDYGVNRLS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+  E+ L  +GR H+  +    +  AR I    +S DLIY+LP+QT+  +   LQ 
Sbjct: 118 IGVQTFNERLLEKIGRVHSNRQVFDCVEQARKIGMSNISLDLIYSLPEQTVADFSSTLQT 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A S  V+H+S Y L IE  T+FY +   G L LP++     +Y L        G H YEI
Sbjct: 178 AFSLEVEHMSAYSLIIEPKTVFYNLMNKGKLPLPAQEEEAAMYELLMKEMDKQGFHQYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES+HNL YW   DY GIG GAHS +  G  R  I   K    ++  V + G+
Sbjct: 238 SNFAKPGYESIHNLTYWNNDDYYGIGAGAHSYID-GIRRANIGPLK---KYIDSVEQKGN 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           A + +  ++  ++ +E + +GLR  +G+S ++++    R L
Sbjct: 294 AYLNEVSVTEAEKMEEEMFLGLRKTKGVSKEEFKKKFNREL 334


>gi|282916853|ref|ZP_06324611.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus D139]
 gi|283770659|ref|ZP_06343551.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus H19]
 gi|282319340|gb|EFB49692.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus D139]
 gi|283460806|gb|EFC07896.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus H19]
          Length = 385

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMEIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVSSRRFK 333


>gi|257055326|ref|YP_003133158.1| coproporphyrinogen III oxidase, anaerobic [Saccharomonospora
           viridis DSM 43017]
 gi|256585198|gb|ACU96331.1| coproporphyrinogen III oxidase, anaerobic [Saccharomonospora
           viridis DSM 43017]
          Length = 422

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 191/394 (48%), Gaps = 31/394 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LT 66
           G+   GVYVH PFC  +C YCDFN+    Y  G+     S  +    +R+        L 
Sbjct: 43  GTRPFGVYVHVPFCATRCGYCDFNT----YTAGELGTAASPASWFDGLRRELDLAVTTLG 98

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P    ++F GGGTPSL+    +A +LD +   + ++S+VE+T E+NP S     F G R
Sbjct: 99  DPPPADTVFVGGGTPSLLGADGLARVLDAVRDTFGLASDVEVTTESNPESTSPEFFAGLR 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +AG  R+SLG+QS     LR L R H       A   AR   F  ++ DLIY  P +   
Sbjct: 159 EAGYTRVSLGMQSTAPHVLRVLDRVHTPGRPTQAAAEARAAGFEHVNLDLIYGTPGERTA 218

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                ++  L   VDH+S Y L +E+GT   +  + G++  P ++V    Y L  S+ + 
Sbjct: 219 DLRASVEAVLEAGVDHVSAYALIVEEGTALARRVRKGEIPAPDDDVLAADYELIDSMLTD 278

Query: 246 HGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            GL  YE+SN  +   A   HNL YWR GD+ G GPGAHS V      V     KHP  +
Sbjct: 279 AGLRWYEVSNWAASPDARCRHNLGYWRGGDWWGAGPGAHSHVG----GVRWWNVKHPARY 334

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
             ++      V  +E L+  ++  E +M+ LRL EG+ +          LD +  R  +R
Sbjct: 335 AAVLADGKLPVAGQEELTDSERYLERVMLELRLAEGLPLD--------VLDDDGLREAKR 386

Query: 365 ---QGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
               G ++R   +R     T RG  + D+V+  L
Sbjct: 387 AVEDGLLDRDAAARGHAVLTDRGRLLADAVVRRL 420


>gi|238927752|ref|ZP_04659512.1| possible coproporphyrinogen dehydrogenase [Selenomonas flueggei
           ATCC 43531]
 gi|238884468|gb|EEQ48106.1| possible coproporphyrinogen dehydrogenase [Selenomonas flueggei
           ATCC 43531]
          Length = 389

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/351 (35%), Positives = 190/351 (54%), Gaps = 19/351 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRS-- 70
           +G  + G+YVH P+CVKKC YCDF S     +  + E++  +   E+  +R++   R+  
Sbjct: 5   EGRQTWGIYVHIPYCVKKCAYCDFVSVPSAQRGAEMEDYAAALTAEI--LREVPPLRARW 62

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYR 126
              ++I+ GGGTP+ +     A +L G+    T ++   +E ++EANP +V+       R
Sbjct: 63  GDAATIYVGGGTPTALP----APLLTGVLHTLTAAAGEPLECSVEANPGTVDEVYLGALR 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
            AG NR+SLGVQS +++ LR +GR H A EA  A H AR   F  +S DL+Y LP QT+ 
Sbjct: 119 AAGANRLSLGVQSFDDELLRAVGRIHTAEEAERAFHAARAAGFGNISIDLMYGLPGQTLD 178

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +       A + A +HLS+Y LTIE+GT F  M   G L LP+E+ A ++Y+   +   A
Sbjct: 179 RLRRSAAAAAALAPEHLSVYGLTIEEGTPFAAMQAAGRLNLPTEDAAEEMYDFLMAELPA 238

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEI+N +  G ES HN  YW    Y+G+G  AH  V      V  + E    S++
Sbjct: 239 RGYARYEIANFARRGFESRHNRGYWHMTPYLGLGAAAHGYVD----GVRWANEADTPSYI 294

Query: 306 KMVRKNGHAVVEKEFLSSEQQA-DEFLMMGLRLREGISVKDWEMLAGRNLD 355
           + VR        ++   + ++A +E+  + LR  EGI   D+    GR+L+
Sbjct: 295 RAVRAGTCVRTPEDGARTRERAMEEYAFLALRTAEGIDAADFHRCWGRDLE 345


>gi|145595970|ref|YP_001160267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salinispora tropica CNB-440]
 gi|145305307|gb|ABP55889.1| coproporphyrinogen III oxidase, anaerobic [Salinispora tropica
           CNB-440]
          Length = 407

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 177/342 (51%), Gaps = 12/342 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG 67
           +T  G+   GVYVH PFC  +C YCDFN++      G   +E +  + L E+    ++ G
Sbjct: 22  LTSVGARGFGVYVHVPFCASRCGYCDFNTYTAAELGGGASREEYADTVLAELALAARVLG 81

Query: 68  ---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  + ++F GGGTP+L+   ++A ILD I + W ++++ E+T EANP SV   +   
Sbjct: 82  ENRPSRVDTVFVGGGTPTLLPAADLARILDAIDRTWGLATDAEVTTEANPESVTPRSLAA 141

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
            R AG  RISLG+QS     L  L R H+      AA       F  ++ DLIY  P ++
Sbjct: 142 LRAAGYTRISLGMQSASPGVLAILDRRHSAGRAIAAAGEAREAGFDHVNLDLIYGTPGES 201

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L   ++  VDH+S Y L +E+GT      + G++  P ++VA D Y   ++  
Sbjct: 202 AADFAASLDEVVAAGVDHVSAYSLIVEEGTRLAAQVRRGEVAQPCDDVAADRYLAAEAAL 261

Query: 244 SAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            A G   YE+SN S    A   HNL YW  G++ G+GPGAHS V      V     KHP 
Sbjct: 262 DAAGFSWYEVSNWSRTPAARCRHNLLYWTGGNWWGLGPGAHSHVG----GVRWWNVKHPT 317

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++ + +       + +E L++++   E +M+ LRL  G+ + 
Sbjct: 318 AYAQRLAAGASPGLAREVLTADEAYLEDVMLRLRLAAGLPLD 359


>gi|322387515|ref|ZP_08061124.1| coproporphyrinogen dehydrogenase [Streptococcus infantis ATCC
           700779]
 gi|321141382|gb|EFX36878.1| coproporphyrinogen dehydrogenase [Streptococcus infantis ATCC
           700779]
          Length = 376

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 211/378 (55%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQ--ENFIQSFLT-EMQWMRQLTGPRSISSIFFG 77
           YVH PFC + C YCDF+   ++   V    E+ +Q F + ++Q +R         +++ G
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPVDSYLEHLLQEFHSYDIQKLR---------TLYIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGV
Sbjct: 60  GGTPTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDEDKIAVLKNSAVNRVSLGV 119

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q+ +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A
Sbjct: 120 QTFDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E V  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEEVEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   +    ++    I +H   +LK V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYINGVRYKNHGPI-RH---YLKAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S   +E   G    N+  +  R+L  QG ++ +
Sbjct: 293 RIHEEHLSLREQMEEEMFLGLRKKTGVSKARFEEKFGTSFENIYGQVVRDLCHQGLLQ-I 351

Query: 372 QFSRLRCTQRGMTMLDSV 389
           +  ++R T++G+ + D+V
Sbjct: 352 EDQQIRMTKKGLFLGDTV 369


>gi|309798492|ref|ZP_07692776.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus infantis SK1302]
 gi|308117884|gb|EFO55276.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus infantis SK1302]
          Length = 376

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 208/384 (54%), Gaps = 37/384 (9%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISS 73
            YVH PFC + C YCDF      N  V  Y    E+ +Q F + ++Q +R         +
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPVESY---LEHLLQEFHSYDIQKLR---------T 55

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+
Sbjct: 56  LYIGGGTPTALSASQLEVLLEGLTKNLDLSMLEELTIEANPGDLDADKIAVLQNSAVNRV 115

Query: 134 SLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           SLGVQ+ +++ L+ +GR+H      E I  + LA   F  +S DLIYALP QTM Q +  
Sbjct: 116 SLGVQTFDDKMLKKIGRSHTEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMDQVKDN 173

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + +A++  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   
Sbjct: 174 VAKAVALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEH 233

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP--ESWLKMV 308
           YEISN S  G ES HNL YW   +Y GIG GA   V        I  + H     +LK V
Sbjct: 234 YEISNFSKPGFESRHNLMYWDNAEYYGIGAGASGYVD------GIRYKNHGPIRHYLKAV 287

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQ 365
            + G+A + +E LS  +Q +E + +GLR + G+S+  +E   GR+   L  +  ++L +Q
Sbjct: 288 EE-GNARINEEHLSPREQMEEEMFLGLRKKSGVSMARFEEKFGRSFQELYGDIVKDLIQQ 346

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G ++ +    +R T+RG+ + D+V
Sbjct: 347 GLMQ-LDGDHVRMTKRGLFLGDTV 369


>gi|269127462|ref|YP_003300832.1| oxygen-independent coproporphyrinogen III oxidase [Thermomonospora
           curvata DSM 43183]
 gi|268312420|gb|ACY98794.1| oxygen-independent coproporphyrinogen III oxidase [Thermomonospora
           curvata DSM 43183]
          Length = 403

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 195/395 (49%), Gaps = 20/395 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ 64
           E+ + G G+     YVH PFCV +C YCDFN++          ++++  + + E++  R+
Sbjct: 19  ESALDGLGARPFACYVHVPFCVTRCGYCDFNTYTAAELGPGASRDSYADAAIAELRLARR 78

Query: 65  LTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G     + ++FFGGGTP+L+ P  +  IL  I   + ++   E+T EANP SV+    
Sbjct: 79  VLGQTDLPVRTVFFGGGTPTLLPPGELGRILAAIDAEFGLAPGAEVTTEANPESVDEGYL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R AG  RIS G+QS     L  L R H        +  AR   F +++ DLIY  P 
Sbjct: 139 EQLRAAGFTRISYGMQSARPHVLAALDRVHTPGRIPQVVRWARKAGFEQVNLDLIYGTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W   L  AL    DH+S Y L +E+GT      + G+L  P ++   D Y + + 
Sbjct: 199 ESAADWRASLLAALETEPDHISAYALIVEEGTRLAARVRRGELAAPDDDAMADRYLMAEE 258

Query: 242 ITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + SAHGLH YEISN +    A   HNL YW   D+ GIGPGAHS V  G+    +   KH
Sbjct: 259 LLSAHGLHWYEISNWARGPHAACRHNLLYWTGADWWGIGPGAHSHVG-GTRWWNV---KH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P ++   +         +E L++ ++  E +M+ LRL EG   +  E       D    R
Sbjct: 315 PAAYAARLAGGRSPAHAREVLTAAERRLERIMLELRLAEGCPAELLE-------DAAVRR 367

Query: 361 NLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
            +      E   F R R   T RG  + D+V+ +L
Sbjct: 368 AIADGLVEEEPYFGRGRAVLTLRGRLLADAVVRDL 402


>gi|238060566|ref|ZP_04605275.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
 gi|237882377|gb|EEP71205.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
          Length = 477

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/321 (35%), Positives = 167/321 (52%), Gaps = 12/321 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG---P 68
           G+   GVYVH PFC  +C YCDFN++      G   +E +    L E+    ++ G   P
Sbjct: 28  GARGFGVYVHVPFCASRCGYCDFNTYTADELGGGASREAYADQVLAELALAGRVLGDAPP 87

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   + +  R A
Sbjct: 88  PRVDTVFVGGGTPTLLPADDLARILDGIDRTWGLAADAEVTTEANPESVTPESLKSLRAA 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RISLG+QS     L  L R H A  A  A   AR+  F  ++ DLIY  P +    +
Sbjct: 148 GYTRISLGMQSAAPGVLAILDRRHRAGRATEAAREARDAGFDHVNLDLIYGTPGENAEDF 207

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L + +S  VDH+S Y L +E GT      + G+L  PS++VA D Y   ++     G
Sbjct: 208 AASLAQVVSAGVDHVSAYALIVEDGTRLAARMRRGELPYPSDDVAADRYLAAEAALGEAG 267

Query: 248 LHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
              YE+SN +   G +  HNL YW  G + G+GPGAHS V      V     KHP ++ K
Sbjct: 268 FSWYEVSNWARTPGGQCRHNLLYWTGGHWWGLGPGAHSHVGG----VRWWNVKHPSAYAK 323

Query: 307 MVRKNGHAVVEKEFLSSEQQA 327
            +       + +E L+  + A
Sbjct: 324 RLAAAQSPGLAREVLTPRRGA 344


>gi|311113638|ref|YP_003984860.1| coproporphyrinogen III oxidase [Rothia dentocariosa ATCC 17931]
 gi|310945132|gb|ADP41426.1| coproporphyrinogen III oxidase [Rothia dentocariosa ATCC 17931]
          Length = 423

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 195/394 (49%), Gaps = 32/394 (8%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWM-RQLTGP 68
           G  +    +YVH PFC  +C YCDFN++        +G   +    + E+ +  R L   
Sbjct: 24  GCQNRDFSLYVHIPFCSVRCGYCDFNTYATEDFGDGIGLGTYADDAIAEIFFAARALEAS 83

Query: 69  ----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R + ++FFGGGTP+ +   ++  IL      + +    E+T EANP SV   + Q 
Sbjct: 84  GVVKRPLHTVFFGGGTPTKLPAYDLVRILRTAIDIFGIEDGAEVTTEANPDSVTYEDLQT 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            +  G  R+S G+QS+  + L+ L R H        +  AR+I  ++S DLIY  P +T+
Sbjct: 144 LKDGGFTRVSFGMQSVVPEVLKVLDRTHTPENVPKVVAWARDIGLQVSIDLIYGSPSETL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            QWE  +Q A+SY  DH+S Y L +E GT      + G+  +P +++  D+Y   + +  
Sbjct: 204 EQWEQSVQAAISYQPDHISAYSLIVEDGTKLAAQIRRGEYTMPDDDLMADMYLRAEDLLM 263

Query: 245 AHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
             G   YE+SN+S      S HN+ YWR  D+ GIGPGAHS +  G+    I   KHP  
Sbjct: 264 QAGYRWYEVSNYSRSEHTRSDHNMAYWRNQDWWGIGPGAHSHIN-GTRWWNI---KHPVP 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-------GRNLDI 356
           +   VR        +E L S+ ++ E +M+ +R+REG+ +   E+LA       G +L  
Sbjct: 320 YAHRVRAGQSPAAAREILDSDSRSFETIMLLIRVREGLPMH--ELLAVHPAADLGSSL-- 375

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              R L  QG IE   F     T  GM   D+ +
Sbjct: 376 ---RWLLSQGLIESDIF-----TDTGMPNPDASV 401


>gi|326435788|gb|EGD81358.1| hypothetical protein PTSG_02077 [Salpingoeca sp. ATCC 50818]
          Length = 443

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 203/421 (48%), Gaps = 47/421 (11%)

Query: 12  TGQGSNSL-----GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           TG G  SL      +Y+HWPFC   C YCDFN        G++  ++      Q M Q  
Sbjct: 24  TGAGCCSLLSGVKSLYLHWPFCAGICHYCDFNKFKAPRNGGRDGVVEQL---EQAMLQCA 80

Query: 67  GPR--------SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                       + S+F+GGGTPSL   + IA     +     +S+  E+T+EANP++  
Sbjct: 81  SDHFSRHEEECQVHSVFWGGGTPSLARAEFIA----ELHSRLPLSTATEVTLEANPTAGI 136

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                   +AG+NR+S+GVQS  +  L+ LGR H+  +AI +I  A +IF    +S DL+
Sbjct: 137 APTLTALHQAGINRLSIGVQSFRDADLKVLGRQHSYKDAIKSIEAATSIFGENNVSIDLM 196

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT+  W+  L+ ALS+ + H+SLY+LTI+  T F+K+ + G           DLY
Sbjct: 197 YGLPGQTVAAWDEVLELALSFNLGHMSLYELTIKPNTRFHKLQQAGKF---HHEPLEDLY 253

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
               +   + G   YE+SN+   G E+ HN+++W+ G+Y+GIGPGA  R    S  V   
Sbjct: 254 FHAANKLVSRGYDHYEVSNYCKPGREAQHNVHHWQGGEYVGIGPGAVGRYTRNSEVVLAE 313

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               P+ W+  VR+    V     + S++     L  GLR+R G+ ++ +    G  L  
Sbjct: 314 PYMKPKDWIASVRRGERGVESYTPMPSDEVMAYTLATGLRMRCGVCLQHFGARFGPALTT 373

Query: 357 -----ECERNLQRQGFIERVQFS-----------------RLRCTQRGMTMLDSVIANLA 394
                   R L   G+++ V  +                 RL  T++GM + D+V   L 
Sbjct: 374 ALTSSPLARQLLELGYVDVVDGAGNTGGEGRAFGGGSSRQRLVPTEKGMAVGDAVQEQLC 433

Query: 395 V 395
            
Sbjct: 434 T 434


>gi|289642697|ref|ZP_06474837.1| oxygen-independent coproporphyrinogen III oxidase [Frankia symbiont
           of Datisca glomerata]
 gi|289507527|gb|EFD28486.1| oxygen-independent coproporphyrinogen III oxidase [Frankia symbiont
           of Datisca glomerata]
          Length = 475

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 192/388 (49%), Gaps = 18/388 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           GS   GVYVH P+C   C YCDFN++        V    F+++   E +  R + GP   
Sbjct: 94  GSRPFGVYVHVPYCATHCGYCDFNTYTATELGPGVAIGTFVETLAAEFRLARSVLGPADV 153

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++S++F GGGTP+L+  +++  +L  I   + +++  E+T EANP SV+    +    AG
Sbjct: 154 AVSTVFVGGGTPTLLPAEDLERLLRMIDAEFGLAAGAEVTTEANPESVDAGALERLAAAG 213

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             RIS G+QS     L  L R H        +  AR   F  ++ DLIY  P ++   W+
Sbjct: 214 YTRISFGMQSARPHVLAALDRRHTPGRVPDVVSWARKAGFAHINLDLIYGTPGESARDWQ 273

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L   ++   DH+S Y LT+E GT   +  + G+L+ P +++  D Y   +   +A GL
Sbjct: 274 ASLDAVVALDPDHVSAYALTVEDGTRLARRIRRGELLPPDDDLMADRYQQAEETLTAAGL 333

Query: 249 HAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             YEISN +    A S HNL YWR  D+ G GPGAHS +      V     +HP S+   
Sbjct: 334 SWYEISNWARGPAAHSRHNLGYWRGADWWGFGPGAHSHIG----GVRWWNVRHPASYSAR 389

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +          E L +     E +M+ +RL EG++ ++    AGR+   +  R L   G 
Sbjct: 390 LAAGASPAAAHEELDAAAARMERIMLEVRLAEGLAAEELTP-AGRS---QAAR-LAADGL 444

Query: 368 IERVQFS--RLRCTQRGMTMLDSVIANL 393
           ++    +  R+  T RG  + D+VI  L
Sbjct: 445 VDPPALAAGRVLLTLRGRLLADTVIHAL 472


>gi|207723804|ref|YP_002254202.1| cog0635, coproporphyrinogen III oxidase and related fe-s
           oxidoreductases protein [Ralstonia solanacearum MolK2]
 gi|206589009|emb|CAQ35971.1| cog0635, coproporphyrinogen III oxidase and related fe-s
           oxidoreductases protein [Ralstonia solanacearum MolK2]
          Length = 405

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 198/352 (56%), Gaps = 13/352 (3%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           + +E F+ +   +++    +   R + +IF GGGTPSL+  Q +  +L  I     V ++
Sbjct: 53  IPEERFLAAVRQDLEAALPMVWGRRVHTIFIGGGTPSLLSAQGLDTLLSDIRMLLPVDAD 112

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            EIT+EANP + E   F+ Y  +GVNR+S+G+QS  +  L+ LGR H+A+EA AAI +AR
Sbjct: 113 AEITMEANPGTFEAERFRSYHASGVNRLSIGIQSFNDAHLQALGRIHSAAEARAAIDIAR 172

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             F  ++ DL++ALP QT+ + E +++ ALS+   H+SLY LT+E  T F K        
Sbjct: 173 AHFDNINLDLMFALPGQTLAECEADVEAALSFETSHVSLYHLTLEPNTYFAKYPP----A 228

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
           LP ++ A  + +   +  +A G   YE+S ++  G    HNLNYW++GDY+GIGPGAH +
Sbjct: 229 LPDDDTAFGMQDWIHARLAAAGYEHYEVSAYARPGKRCKHNLNYWQFGDYLGIGPGAHGK 288

Query: 286 VKVGSHRVAISIE-KHPESWLKMVRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGIS 342
           +    HRV   +  +HPE++L+     G A V  E+  + +     EF++  LRL  G  
Sbjct: 289 LSF-PHRVLREMRHRHPETYLRQAETAGGAAVLQEQREVDAADLPFEFMLNALRLTGGFP 347

Query: 343 VKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           V  ++   G   R ++ E +   QR G + R   + +R T+ G   L+ + A
Sbjct: 348 VTLFQERTGLPLRAIERELDAAEQR-GLLARDHVA-IRPTELGQRFLNDLQA 397


>gi|315641132|ref|ZP_07896211.1| coproporphyrinogen dehydrogenase [Enterococcus italicus DSM 15952]
 gi|315483140|gb|EFU73657.1| coproporphyrinogen dehydrogenase [Enterococcus italicus DSM 15952]
          Length = 385

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 183/338 (54%), Gaps = 11/338 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C YCDFN   + +  GQ  + ++   L E++W  +     S  +I+ GG
Sbjct: 9   MYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDRLLDEIEWGTK-NKTTSFPTIYIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    +  +L GI +  +++   E TIEANP  +        +  GVNR+S+GVQ
Sbjct: 65  GTPTSLTATQLDKLLAGITERVSLADTKEFTIEANPGDLTEEKLAIIQNYGVNRVSMGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L+ +GR H+A +    +HL     F  +S DLIYALP QT+  +   L +AL++
Sbjct: 125 SFDDRLLKKIGRKHSAQDVTETLHLLEAKGFSNVSIDLIYALPGQTLDNFRQTLTQALTF 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E  T+F    + G++VLPS+ V + ++  T    +  G   YEISN +
Sbjct: 185 DLPHYSLYSLILENKTMFMNWMRKGNMVLPSQEVELQMFEETIDAMTKAGKFQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GA   V    +R    I    + +LK +R+    + +
Sbjct: 245 TPGYESQHNLMYWDNEEYYGFGAGASGYVDQKRYRNFGPI----QHYLKPLREGTLPIYQ 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E +  ++Q +E L +GLR   G+S K +E   G++ D
Sbjct: 301 SESVLRKEQIEEELFLGLRKLAGVSKKAFEKKFGQSFD 338


>gi|313902209|ref|ZP_07835617.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467544|gb|EFR63050.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 482

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 183/323 (56%), Gaps = 7/323 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGG 79
           +Y+H P+C ++C YCDFN+++   + G+  ++ +   E+  +    G  R + S+F GGG
Sbjct: 104 LYIHVPYCRQRCYYCDFNTYLLDPE-GKRRYLAALERELDLLAADPGLTRPLVSVFVGGG 162

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+EP  +  +L+ + + + ++   EIT+E NP +++    +  R  GV R+SLG+Q+
Sbjct: 163 TPSLLEPAELERLLEAVHRRFALAPGAEITVECNPGTLDEGRLRALRGGGVTRLSLGLQA 222

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++++ L+ +GR+H  ++  A     R   F  ++ DLI+ LP QT+ QWE  L+  ++  
Sbjct: 223 VQDELLQAIGRDHTWADFQATYERVRRAGFDNVNVDLIFGLPGQTLAQWEESLRAVVALE 282

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L +  GT F++  + G L LP E+    +++    +  A G   YEISN + 
Sbjct: 283 PEHVSCYGLELHPGTPFHRRWEAGLLDLPGEDAERAMFDRAYEVLGAAGFVRYEISNFAR 342

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HN  YW  G Y+G GPGA S  +    R  +    HP ++   + +   AV  +
Sbjct: 343 PGRESVHNRVYWLNGSYLGAGPGAWSCWQGERRRNRL----HPLAYAASLEQGEPAVDLR 398

Query: 319 EFLSSEQQADEFLMMGLRLREGI 341
           E +   Q  +E +++GLRL EG+
Sbjct: 399 EPVGRRQAMEETMILGLRLAEGV 421


>gi|332799047|ref|YP_004460546.1| oxygen-independent coproporphyrinogen III oxidase
           [Tepidanaerobacter sp. Re1]
 gi|332696782|gb|AEE91239.1| oxygen-independent coproporphyrinogen III oxidase
           [Tepidanaerobacter sp. Re1]
          Length = 375

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 213/380 (56%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++G+Y+H PFC+KKC YCDFNS      + +  ++ +   E+  +++     +  +IF G
Sbjct: 3   TIGLYIHIPFCIKKCHYCDFNSFTTLELIPE--YLAALKKEILSLQKC--EYTAQTIFIG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++  + +A IL  + ++  ++ + EITIEANP ++        +  GVNR+S+G+
Sbjct: 59  GGTPTILRCEQLADILRTLHESVYIAKDAEITIEANPGTLTREKLISLKSLGVNRLSIGL 118

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ + Q L+ +GR H   +       ARN+ F  ++ DLI+ LP Q +  ++  L++ L 
Sbjct: 119 QAYQNQLLKIMGRIHTVEDFEKNFETARNVGFDNINIDLIFGLPNQKVEDFDETLKKVLH 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L++E+ T FY+  ++G L+LPSE+   ++Y     + +  G + YEISN 
Sbjct: 179 IFPEHISCYSLSVEEHTEFYRRQQEGTLLLPSEDDEREMYYRAIELLTNKGYNHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +S HN+ YW Y +Y+G+G GAHS +         SI    ++++K + +N +A+ 
Sbjct: 239 AMPGRKSKHNIIYWTYREYLGLGAGAHSFLDNKRFYNYSSI----QAYIKSINENSNAIA 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
           + E +S+ +Q  EF  +GLRL +G+  K ++   G+       E    L+ Q  I+    
Sbjct: 295 DMETISTLEQQAEFCFLGLRLLDGLDKKAFQKRFGKKFKQVYGEAVEKLKEQELIKE-NA 353

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           +++  T RG+   + V A  
Sbjct: 354 NKISLTSRGLDFANVVFAEF 373


>gi|282904165|ref|ZP_06312053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus C160]
 gi|282905992|ref|ZP_06313847.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282911221|ref|ZP_06319023.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|283958347|ref|ZP_06375798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295428161|ref|ZP_06820793.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|282324916|gb|EFB55226.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282331284|gb|EFB60798.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282595783|gb|EFC00747.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790496|gb|EFC29313.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295128519|gb|EFG58153.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus EMRSA16]
          Length = 385

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVSSRRFK 333


>gi|318061217|ref|ZP_07979938.1| coproporphyrinogen III oxidase [Streptomyces sp. SA3_actG]
          Length = 410

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 198/396 (50%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 22  LDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 82  RVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVDPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY  P
Sbjct: 142 LETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 202 GESDADWHASLEAAIGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYLIAD 261

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 ELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E L  E +  E +++ LRL EG  + D  + AGR       
Sbjct: 318 HPGAYAAALAEGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRE---AAA 373

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R+L   G ++   +++     T RG  + D+V+ +L
Sbjct: 374 RHLG-DGLLDPGAYAKGAAVLTLRGRLLADAVVRDL 408


>gi|262364867|gb|ACY61424.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
          Length = 347

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 194/353 (54%), Gaps = 22/353 (6%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           V  + +++  L ++     L   R IS+IF GGGTPSL+  + +  +LDG+     V+S+
Sbjct: 5   VPHQEYVEHVLADLDADVPLVSGREISTIFIGGGTPSLLSAEAMQQLLDGVRARLPVASD 64

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            EIT+EANP +VE + F GY++AG+NRIS+GVQS   Q L  LGR H   EA  A  LA 
Sbjct: 65  AEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAQKLTRLGRIHGPDEARRAAELAT 124

Query: 166 NIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           ++  R  + DL++ LP QT+ +   +L++A++    HLS YQLTIE  T F         
Sbjct: 125 SLQLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP---- 180

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           +LP ++   D++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH 
Sbjct: 181 ILPDDDALWDIFQQGHQLLSAAGYLQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHG 240

Query: 285 RVKVGSHRVAISIE-KHPESWLK---MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           ++     R+  +I+ KHP  +++   + ++   A V++ F        EF M   RL E 
Sbjct: 241 KITFNDGRILRTIKTKHPRGFMQGKYLDKQYEVAAVDRPF--------EFFMNRFRLLEA 292

Query: 341 ISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               D+    G     +  + +  + ++  IE  ++ ++  T++G   L+S++
Sbjct: 293 APRADFYHFTGLTESTIRPQLDEAIAKEYLIETTEYWQI--TEKGKLFLNSLL 343


>gi|150390801|ref|YP_001320850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus metalliredigens QYMF]
 gi|149950663|gb|ABR49191.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus metalliredigens QYMF]
          Length = 379

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 207/382 (54%), Gaps = 12/382 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +G+Y+H PFC KKC YCDF S    ++ +G   ++++   E+   ++      I +IFFG
Sbjct: 4   IGLYIHIPFCEKKCYYCDFTSFSGEKHLIGP--YVEALKQEVLLYKEALTGYEIKTIFFG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++  + +A +++ I ++  + +  EI++EANP  +  +    Y  +G+NR+S+G+
Sbjct: 62  GGTPSILSGEAMAELMEWIRRHVEIDTKAEISMEANPGLLSKDKLHRYYDSGINRLSIGL 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++  L+ LGR H   + I  +  AR + F  ++ D+++ALP Q+M +W+  L   + 
Sbjct: 122 QACQDHLLKSLGRIHTYGDFIQNLADARGVGFSNINVDMMFALPNQSMNEWKASLTEIID 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V HLS Y L IE+GT F +  +D  +    E + + +++ T  I  + G   YEISN 
Sbjct: 182 LGVPHLSTYGLIIEEGTSFNQWVEDKKIKTLDEELELAMFHETIRILKSKGYTHYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    E  HN  YWR   Y+G+G GAHS  +    ++  S   H   ++  +      + 
Sbjct: 242 SKPEYECRHNQIYWRNRPYLGLGVGAHSYFE----KMRFSNTSHIGIYINKINIGEKPLD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDI--ECERNLQRQGFIERVQF 373
            +E ++   +  E + +GLRL EG+S+ D+ E       D+  +    L  QG +  ++ 
Sbjct: 298 TQELITRNDEISETMFLGLRLLEGVSINDFTERFQSSVFDVYGDVINKLISQGLL-TIKG 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            R+R +QRG+ + + V A + +
Sbjct: 357 DRIRLSQRGVDLSNIVFAEMLL 378


>gi|49483831|ref|YP_041055.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|297590873|ref|ZP_06949511.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49241960|emb|CAG40655.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|297575759|gb|EFH94475.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312437948|gb|ADQ77019.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195486|gb|EFU25873.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 374

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVSSRRFK 322


>gi|238916676|ref|YP_002930193.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
 gi|238872036|gb|ACR71746.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
          Length = 385

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 201/379 (53%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFCV KC YCDF S      V +  + ++ + E++          I+SIFFGGG
Sbjct: 9   GIYIHIPFCVHKCIYCDFLSAPAGDAV-KYAYTRALINEIRNTADRQVKDKITSIFFGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    IA IL  +   + +S + EIT+E NP +V  +    YR AGVNR+S G+QS
Sbjct: 68  TPSVLPDGCIADILSAVRDCFDISDDAEITMECNPGTVNESRLSEYRAAGVNRLSFGLQS 127

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ LGR H   +   +  LAR+  F  ++ DL+ A+P QT    E    + ++  
Sbjct: 128 ADNNELKMLGRIHTFEQFEESFRLARDAGFNNINVDLMSAIPGQTEATLENTFDKVMALQ 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L +E+GT +   + D    +P E     +Y++T+ I    G   YEISN+S 
Sbjct: 188 PEHISVYSLILEEGT-YLADNIDKFPPVPDEEEDRRMYHITKQILENAGYERYEISNYSR 246

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW  G+Y G G  A      G+ R   S  +    ++++    G      
Sbjct: 247 PGFECRHNLLYWNRGEYYGFGCSAAGF--TGNERY--SDIRDVREYIELNGDIGKLHENI 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DI---ECERNLQRQGFIERVQFS 374
           E L+ E   +EF+ +GLR   G+ VKD++   G ++ D+   E ERN+ +   ++R    
Sbjct: 303 EILTKEDAMEEFMFLGLRKVAGVDVKDFQNRFGVSINDVYAKETERNINKGLLVKRGDM- 361

Query: 375 RLRCTQRGMTMLDSVIANL 393
            LR T+ GM + ++V+++ 
Sbjct: 362 -LRLTEYGMDICNTVMSDF 379


>gi|224476691|ref|YP_002634297.1| coproporphyrinogen III oxidase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421298|emb|CAL28112.1| putative oxygen-independent coproporphyrinogen oxidase III
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 373

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 203/375 (54%), Gaps = 20/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFGGG 79
           Y+H PFCV+ C YCDFN +       Q   +  +L  +  +++L+ P  + ++++F GGG
Sbjct: 7   YIHIPFCVRICTYCDFNKYFI-----QNQPVDEYLNCL--IKELSQPNKKELNTMFVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  Q +  +L  I  N+ + +  E T EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 60  TPTALSTQQLEKLLKAINDNYIIKN--EYTFEANPDELTNEKVQLLKDYGVNRLSMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ LGR HN ++   A++LA       +S DL+Y LP QT+ Q+E  L  ALS  
Sbjct: 118 FDQSLLKILGRTHNTNDIYQAVNLANKFDINSISLDLMYHLPGQTIHQFEESLDIALSMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E  T FY M++ G L LP+E++  ++Y+L         +H YEISN S 
Sbjct: 178 INHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGEEMYDLLLDKIQNSNMHQYEISNFSQ 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +  ES HN  YW+   Y G G GA   V  G     ++   H   ++K ++     +++ 
Sbjct: 238 VNHESEHNKVYWKNEYYYGFGAGASGYVD-GVRYSNVNPVNH---YIKKIKNGEKPILQS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERN-LQRQGFIERVQFSR 375
              + ++Q +E + +GLR+ +G+S K +E    + LD     E N L  +G IE  +   
Sbjct: 294 TIPNFKEQIEEQMFLGLRMNKGVSKKTFENRFDKRLDDIYSNELNDLISKGLIED-KGEY 352

Query: 376 LRCTQRGMTMLDSVI 390
           ++ T+RG  + + V 
Sbjct: 353 VKLTERGKVIGNEVF 367


>gi|333027163|ref|ZP_08455227.1| putative coproporphyrinogen III oxidase [Streptomyces sp. Tu6071]
 gi|332747015|gb|EGJ77456.1| putative coproporphyrinogen III oxidase [Streptomyces sp. Tu6071]
          Length = 410

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 198/396 (50%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 22  LDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 82  RVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVDPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY  P
Sbjct: 142 LETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 202 GESDADWRASLEAAVGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYLIAD 261

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 ELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E L  E +  E +++ LRL EG  + D  + AGR       
Sbjct: 318 HPGAYAAALAEGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRE---AAA 373

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R+L   G ++   +++     T RG  + D+V+ +L
Sbjct: 374 RHLG-DGLLDPGAYAKGAAVLTLRGRLLADAVVRDL 408


>gi|329121170|ref|ZP_08249798.1| coproporphyrinogen dehydrogenase [Dialister micraerophilus DSM
           19965]
 gi|327470252|gb|EGF15713.1| coproporphyrinogen dehydrogenase [Dialister micraerophilus DSM
           19965]
          Length = 378

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 191/348 (54%), Gaps = 20/348 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSIS 72
           +  LG+Y+H PFC  +C YC+F      Y +G    + F+++F  E++        +   
Sbjct: 2   TEDLGLYLHIPFCKSRCSYCNF------YSIGMKADDKFVKAFEKEIELKSCKYKNKICD 55

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+FGGGTPS +    +  I+  + +++ +S N EIT+E NP  +        RK G+NR
Sbjct: 56  TIYFGGGTPSTLSSTQVESIMRKLFQHFNISKNAEITMELNPCDMTKEYLASIRKIGINR 115

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+Q+  +  L  +GR HNA +A  AI+ A+   F  +S DL+Y LP QT   ++  L
Sbjct: 116 ISVGIQTNYDSLLLKIGRMHNAKQAEKAIYQAKKEGFSNISIDLMYELPMQTSKDFKNTL 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   V H+S+Y L IE+GT F +++K G L  PSE  + ++Y     I   +G   Y
Sbjct: 176 LWAVHLPVRHMSIYSLIIEEGTRFSQLYKKGLLNRPSEEASWEMYQSMCRILPHYGFERY 235

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EIS+ +  G +S HN+ YW+  DY+G+GP A SR+K         +  + +  L     +
Sbjct: 236 EISSFAQKGYKSEHNMKYWKLDDYLGLGPAACSRIKHERLENLPGVRLYQKQLL-----S 290

Query: 312 GHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIE 357
           G    EK + LS E++ +EF  + LR++EGI   + E  A R N DI+
Sbjct: 291 GENPPEKIYKLSIEEEMEEFCFLQLRMKEGI---NKEKFAERYNKDIK 335


>gi|94499859|ref|ZP_01306395.1| coproporphyrinogen III oxidase [Oceanobacter sp. RED65]
 gi|94428060|gb|EAT13034.1| coproporphyrinogen III oxidase [Oceanobacter sp. RED65]
          Length = 356

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 192/331 (58%), Gaps = 18/331 (5%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R I SIFFGGGTPSL+  +    +  G+ +      ++EIT+EANP + E   F+GY + 
Sbjct: 31  RPIHSIFFGGGTPSLLSVEAYEQLFAGLRQRLMFEPDIEITLEANPGTFEAEKFKGYFEL 90

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+G+QS + + L+ LGR H+  EA+AA+ LA+   F   + D ++ LP+Q++   
Sbjct: 91  GINRLSIGIQSFQNKQLQHLGRIHSGEEAVAAVQLAKQAGFTNFNLDFMHGLPEQSLDDA 150

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +LQ+ L     H+S YQLTIE  T FYK       VLP +    D+    Q++ + HG
Sbjct: 151 MADLQQGLDLDPTHISWYQLTIEPNTEFYKFPP----VLPKDETLWDIQEQGQALLAKHG 206

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-----KVGSHRVAISIE-KHP 301
              YE+S ++    ++ HNLNYW++GDYIGIG GAH ++      +   R+  + + + P
Sbjct: 207 FKQYEVSAYAQPNKQAKHNLNYWQFGDYIGIGAGAHGKLTLPHDDINESRIYRTAKTRLP 266

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECE- 359
           + +L + +     +V+++ +++E +  E LM GLRL +GIS + +E   G +   IE + 
Sbjct: 267 KDYLNLAKP---FLVKRDNIAAEDRDLECLMNGLRLFDGISAELFEARTGLSFAHIEGKV 323

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +  Q+QG +E  +   ++ T +G   L+ ++
Sbjct: 324 QQAQQQGLLEPGR--GIQATAQGQLFLNELL 352


>gi|299147866|ref|ZP_07040929.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 3_1_23]
 gi|298514049|gb|EFI37935.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 3_1_23]
          Length = 376

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 196/378 (51%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++++   E+   +       I +++FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTRYVRALCRELAMRKDYLKGEDIETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I  ++ +S   EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIRTHYGLSHCQEITLEANPDDLTSEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI A+H  R   F  +S DLIY LP +   +WE +L++A+S  
Sbjct: 121 FDDPTLKLLKRRHNAHTAIEAVHRCREAGFQNISIDLIYGLPGENKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ ++D + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + +N  A  E 
Sbjct: 241 PGKYSRHNSSYWKGIPYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEENSRA-FEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C+R      + G +E      
Sbjct: 296 EYLDQTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQRMAAPYLKNGKLEEHD-GA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|187933035|ref|YP_001885089.1| coproporphyrinogen III oxidase [Clostridium botulinum B str. Eklund
           17B]
 gi|187721188|gb|ACD22409.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B str. Eklund 17B]
          Length = 379

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 205/385 (53%), Gaps = 22/385 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           + +Y+H PFC +KC YCDF S+      G+E FI  ++  + + +R       I SIF G
Sbjct: 9   ISLYIHIPFCKQKCLYCDFPSYS-----GKEKFISEYINSLNKEIRAKASNYKIKSIFIG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +    +  +L  I    T+  N+E T+E NP S+  +  +  +K  VNRIS+G+
Sbjct: 64  GGTPSYLNEIELEKLLKCI-NTLTLEENLEFTMECNPGSLNEDKLKIMKKYNVNRISMGL 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ +GR H   E      LAR + F  ++ DL++ LP Q++  W   L++ + 
Sbjct: 123 QSTKLSLLKEIGRIHTLEEFENNYLLARKVGFKNINIDLMFGLPNQSVEDWRKTLEKIIE 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +H+S Y L IE+GT FY ++  G L LPSE    D+Y LT+ +   +G   YEISN 
Sbjct: 183 FNPEHISAYSLIIEEGTCFYNLYNQGKLNLPSEEKERDMYLLTKELLKDNGYSQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    E  HN+ YW+  +Y+G+G  A S +     +    I    E ++K +  N +  V
Sbjct: 243 SKEEKECYHNIVYWQLNEYLGVGVSASSYINGKRIKNIDDI----EFYIKNI--NSNQSV 296

Query: 317 EKEFLSS--EQQADEFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIER 370
           E E   +      +EF+ MGLR+  GI  +D++    ++++       ++N++++  +  
Sbjct: 297 ENEIYENNINDNMEEFVFMGLRMINGIEERDFKERFKKDINEVYGEVIDKNIKQELLVHN 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+  T RG+ + +SV+++  +
Sbjct: 357 E--GRIYLTSRGIEVSNSVMSDFII 379


>gi|15924573|ref|NP_372107.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927163|ref|NP_374696.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283264|ref|NP_646352.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486418|ref|YP_043639.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|148268067|ref|YP_001247010.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394135|ref|YP_001316810.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156979901|ref|YP_001442160.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316058|ref|ZP_04839271.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006369|ref|ZP_05144970.2| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|258453559|ref|ZP_05701537.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus A5937]
 gi|269203211|ref|YP_003282480.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|296275795|ref|ZP_06858302.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297207698|ref|ZP_06924133.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911779|ref|ZP_07129222.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|13701381|dbj|BAB42675.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus N315]
 gi|14247354|dbj|BAB57745.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21204704|dbj|BAB95400.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49244861|emb|CAG43322.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|147741136|gb|ABQ49434.1| coproporphyrinogen III oxidase, anaerobic [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946587|gb|ABR52523.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus JH1]
 gi|156722036|dbj|BAF78453.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|257864290|gb|EEV87040.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus A5937]
 gi|262075501|gb|ACY11474.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|285817265|gb|ADC37752.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent, in heat shock gene cluster
           [Staphylococcus aureus 04-02981]
 gi|296887715|gb|EFH26613.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300886025|gb|EFK81227.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|312829971|emb|CBX34813.1| oxygen-independent coproporphyrinogen III oxidase 1
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129862|gb|EFT85852.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           CGS03]
          Length = 374

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 173/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVS 317


>gi|318076113|ref|ZP_07983445.1| coproporphyrinogen III oxidase [Streptomyces sp. SA3_actF]
          Length = 413

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 198/396 (50%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 25  LDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 85  RVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY  P
Sbjct: 145 LETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 205 GESDADWHASLEAAIGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYLIAD 264

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 ELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E L  E +  E +++ LRL EG  + D  + AGR       
Sbjct: 321 HPGAYAAALAEGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRE---AAA 376

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R+L   G ++   +++     T RG  + D+V+ +L
Sbjct: 377 RHLG-DGLLDPGAYAKGAAVLTLRGRLLADAVVRDL 411


>gi|329733224|gb|EGG69561.1| putative coproporphyrinogen dehydrogenase [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 385

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 173/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVS 328


>gi|253732236|ref|ZP_04866401.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257793659|ref|ZP_05642638.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9781]
 gi|258411041|ref|ZP_05681321.1| coproporphyrinogen oxidase [Staphylococcus aureus A9763]
 gi|258420155|ref|ZP_05683110.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9719]
 gi|258437415|ref|ZP_05689399.1| coproporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|258443621|ref|ZP_05691960.1| coproporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|258446828|ref|ZP_05694982.1| coproporphyrinogen oxidase [Staphylococcus aureus A6300]
 gi|258448742|ref|ZP_05696854.1| coproporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|282893084|ref|ZP_06301318.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8117]
 gi|282928216|ref|ZP_06335821.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A10102]
 gi|295406706|ref|ZP_06816511.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8819]
 gi|297245712|ref|ZP_06929577.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8796]
 gi|253724025|gb|EES92754.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257787631|gb|EEV25971.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9781]
 gi|257840191|gb|EEV64655.1| coproporphyrinogen oxidase [Staphylococcus aureus A9763]
 gi|257843866|gb|EEV68260.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9719]
 gi|257848620|gb|EEV72608.1| coproporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|257851027|gb|EEV74970.1| coproporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|257854403|gb|EEV77352.1| coproporphyrinogen oxidase [Staphylococcus aureus A6300]
 gi|257858020|gb|EEV80909.1| coproporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|282590023|gb|EFB95105.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A10102]
 gi|282764402|gb|EFC04528.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8117]
 gi|294968453|gb|EFG44477.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8819]
 gi|297177363|gb|EFH36615.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8796]
 gi|329727212|gb|EGG63668.1| putative coproporphyrinogen dehydrogenase [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 385

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 173/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVS 328


>gi|114778280|ref|ZP_01453139.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Mariprofundus ferrooxydans PV-1]
 gi|114551382|gb|EAU53938.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Mariprofundus ferrooxydans PV-1]
          Length = 359

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/333 (36%), Positives = 182/333 (54%), Gaps = 12/333 (3%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+++SIFFGGGTPSL  P  IA ++    + + ++S+ EIT+EANP S E + F  YR+A
Sbjct: 30  RTLASIFFGGGTPSLAPPALIAAVISAAEELFGLTSSCEITLEANPGSAEADRFLAYRQA 89

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+GVQSL+   LR+L R H   EA AA H+AR   F  ++ DL++ LP+Q +  W
Sbjct: 90  GINRLSIGVQSLDAAKLRWLERIHGPEEATAAFHMARRAGFDNINLDLMFGLPEQDLDHW 149

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+R +  A +HLS YQLT+E  T     H      LP + +A+ +   T+   +  G
Sbjct: 150 LTTLRRVVELAPEHLSCYQLTVEAHTALAVRHAQEPYPLPDDELALAMLFATREQLAHAG 209

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESW 304
             AYE+SN S    +  HN  YW+Y DYIGIG GA  +     +G  R   S  + PE +
Sbjct: 210 YQAYEVSNFSRPDLKCRHNDGYWQYDDYIGIGAGAAGKWDEPDLGVTRY--SNTRAPERY 267

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           ++    NG A+  +E L   Q A E   + LR  +GI    ++   G +       NL  
Sbjct: 268 IETATTNGCAINSRESLDHLQAAGEACWLALRRTQGIDRAAFKQRFGTDAFDLFAANL-- 325

Query: 365 QGFIER----VQFSRLRCTQRGMTMLDSVIANL 393
           Q +++R    V    +  T  G+ + D++ A++
Sbjct: 326 QPWLDREMLKVTEQSIFLTPAGLPLADTIAASV 358


>gi|77917728|ref|YP_355543.1| oxygen-independent coproporphyrinogen III oxidase [Pelobacter
           carbinolicus DSM 2380]
 gi|77543811|gb|ABA87373.1| coproporphyrinogen III oxidase, anaerobic [Pelobacter carbinolicus
           DSM 2380]
          Length = 393

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 187/355 (52%), Gaps = 16/355 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------ISS 73
           G+Y+H PFC++KCPYCDF      + +  E  + +   ++   +     RS      +S+
Sbjct: 19  GLYLHIPFCLRKCPYCDF------FSLPAEPGLLTAYPDLLIAQLEIEKRSHRWQGRLST 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL+   + + +S+  EI++EANP +V +++  GYR AG+NR+
Sbjct: 73  VFFGGGTPSLLSPDAIGRILNEADRLFGLSAEAEISLEANPGTVTLDSLSGYRAAGINRL 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQSL++  L+ LGR H A++A +A+H AR   F  +S DLI+ALP Q+      +L+
Sbjct: 133 SFGVQSLDDAYLQRLGRIHTAADAHSAVHWARKAGFDNLSCDLIFALPDQSSQAALEDLE 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L     HLS Y L IE GT   +  +DG L   +E    D +    +  +  G   YE
Sbjct: 193 NMLRLEPQHLSCYGLGIEPGTPLAQALEDGRLRPATEQAYADTFLRLHARLAEAGYEHYE 252

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIEKHPESWLKMVRKN 311
           ISN++  G    HNLN WR   Y+G+GPGAHS        R A+  +   + +++ V   
Sbjct: 253 ISNYARPGRHCRHNLNTWRRQPYLGVGPGAHSFCARNWGERRAVPADF--DRFVETVSAG 310

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
                  E    E+   E   +GLR  EG++   +    G       E+ ++R G
Sbjct: 311 LDPSTVLETFQREEAMAETAYLGLRCAEGVNDAAFSHRFGTTFAEVFEQAIKRCG 365


>gi|319440581|ref|ZP_07989737.1| coproporphyrinogen III oxidase [Corynebacterium variabile DSM
           44702]
          Length = 385

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 188/393 (47%), Gaps = 32/393 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEM-----QWMRQLTGP 68
           G+Y+H PFC  +C YCDFN+    Y  G++       ++ +   E+     +W R    P
Sbjct: 4   GLYIHVPFCTTRCGYCDFNT----YTPGEDGTSSVGTYLNALEAELDRAAAEWDR----P 55

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
              S++F GGGTPSL+    +  +L  + ++  ++   E+T E+NP S     F    +A
Sbjct: 56  GPPSTVFLGGGTPSLLGADGLTRVLGAVRRSLGLAPGAEVTTESNPESTSPEFFSALLEA 115

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RISLG+QS     L+ L RNH    A AA   A    F  ++ DLIY  P +T    
Sbjct: 116 GYTRISLGMQSASAHVLKVLERNHTPGRATAAAQEALAAGFDHVNLDLIYGTPTETDDDL 175

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  ALS  VDH+S Y L +E GT   +  + G L  P E+V  D Y +  +     G
Sbjct: 176 RRSIDAALSTGVDHISAYSLIVEDGTAMARKVRKGQLPAPDEDVYADRYEMIDAALQDAG 235

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI-----EKHPE 302
           +  YE+SN S  G E  HNL YWR G + G GPGAH  V++  H  +  I      K P 
Sbjct: 236 MGWYEVSNWSRQGGECRHNLVYWRGGQWWGAGPGAHGCVRLHGHGSSTGITRLVNAKLPR 295

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            + + +      VV  E LS      E +M GLRL EG+     +M+A     +     L
Sbjct: 296 RYAEALASGDSPVVTTEPLSDADVHTERIMTGLRLAEGLPD---DMVAHAPQAVARHVGL 352

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              G +E+V   R R T  G  + D +I ++ V
Sbjct: 353 ---GLLEQVD-GRTRLTDAGRLLADGIITDILV 381


>gi|227824433|ref|ZP_03989265.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904932|gb|EEH90850.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 379

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 183/342 (53%), Gaps = 17/342 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS---SIFF 76
           G+Y+H PFC  KC YCDF S+  +    +  ++++ + E+   R    P  +S   +++ 
Sbjct: 9   GIYLHIPFCQHKCSYCDFISYQGQDGAARARYVKALIREI---RSYDAPLPVSRGATVYV 65

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + +A I   + +   + S  E+T EANP +V+    +G R  GV+R+SLG
Sbjct: 66  GGGTPSLLSLEELAAIFHALKEKGYLHSPREVTFEANPGTVDEAYLRGLRALGVDRLSLG 125

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QSLE+  LR +GR H A EA   I L++ + F R+S DLIY  P QT    E  L   +
Sbjct: 126 IQSLEDSELRLMGRTHTADEARHIILLSKKVGFTRLSCDLIYGYPTQTAASVEASLTELM 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    H+S+Y L++E GT+     + G  +LP+++   ++Y+L        G   YEISN
Sbjct: 186 ALGPSHISIYGLSVEPGTVLSHNLRQGRWILPTDDETGNMYDLIMDRLVKGGYERYEISN 245

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +S HNL YW Y  Y+  G GA +R   G  R     E +P ++L    +     
Sbjct: 246 FAKAGDKSRHNLVYWHYNPYLAFGAGA-TRFD-GRTR-----ENNP-AYLAAYERG--EA 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            E E LS   Q +E + M LR   G+S+ D+E   GR+   +
Sbjct: 296 PEIECLSPAVQREEMIFMNLRTVRGLSLLDYEARFGRSFAFD 337


>gi|325109973|ref|YP_004271041.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           brasiliensis DSM 5305]
 gi|324970241|gb|ADY61019.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           brasiliensis DSM 5305]
          Length = 391

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 20/397 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT--EMQWM 62
           +A+ NN+  +   S  VYVH PFC  +C YCDF         G+   +  +L    ++  
Sbjct: 6   TAFLNNLAAEPVRS--VYVHVPFCQHRCGYCDFA-----IVAGRNELVPRYLNALSLELT 58

Query: 63  RQLTGPRS---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           RQ +       + +++ GGGTP+L+    +  +L  + + + +  + E T EANP     
Sbjct: 59  RQFSSASERIELDTLYIGGGTPTLLSADELQSLLTLLQQFFVLGPDAEFTFEANPDRFTP 118

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                  +AGVNRISLG+QS ++  L  L R H+A+EA       R  F  +S DLI+AL
Sbjct: 119 EKQDVLSEAGVNRISLGIQSFDDNFLTLLERTHSAAEAEQVYRQTRERFENVSIDLIFAL 178

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   WE  L+RA+S+   H+S Y LT EKGT F+   + G L   ++++   +Y   
Sbjct: 179 PGQTAEHWEQTLERAISWQPAHISTYALTFEKGTSFWGQREKGILAQVADDLETHMYERV 238

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            ++  A GL  YEISN +  G ES HN  YW    +   GPGA + V    +R +++  +
Sbjct: 239 MAVLPAAGLQPYEISNFARPGRESRHNQIYWTGKPFYAFGPGAAAFV---GNRRSVN-HR 294

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
            P +W+K + ++   V   + LS+E++A E   +GLR  +G+++ D     G ++    +
Sbjct: 295 SPFTWMKRLEQDESPVDLVDDLSTEERARELFAVGLRRVQGVNLSDILARTGCDMASLLQ 354

Query: 360 RNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +LQR     ++E+ + +  R T  G    DS+ A++
Sbjct: 355 SDLQRFEELNWLEKTK-TGYRLTPAGRLYADSIAADV 390


>gi|325661804|ref|ZP_08150426.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325471893|gb|EGC75109.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 404

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 186/359 (51%), Gaps = 39/359 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +Y+H PFC+KKC YCDF S    R  +  + ++ + + E++  ++L     +++IFF
Sbjct: 4   ELELYIHIPFCMKKCAYCDFLSGPAPRETI--DRYVTALVAEIRQYQKLAENYRVTTIFF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++    +  I D +   + + ++ EIT+EANP +V   N Q YR  G+NRIS G
Sbjct: 62  GGGTPSILSGGQMKEIFDALRDVFEIQADAEITMEANPGTVTKENLQAYRACGINRISFG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS++++ L+ LGR H   +   +  LAR   F  ++ DLI A+P QT+  WE  L   +
Sbjct: 122 LQSVDDEELKLLGRVHTMRQFEESYDLARKAGFQNINVDLISAIPGQTVESWEHTLDTVI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH-----------------KDGDLV--------LPSEN 230
               +H+S Y L IE+GT FY+++                  DG  +        LP E 
Sbjct: 182 RMNPEHISAYSLIIEEGTPFYEIYGENAKEEQDSRCEKCLADDGKQMDTGKTFPKLPDEE 241

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
               +Y LT     A G   YE+SN++  G    HN  YW+  +Y+GIG GA S ++   
Sbjct: 242 AERRMYELTAEKLEAAGYLQYEVSNYAKPGYACRHNKGYWQRVEYLGIGTGAASLIENER 301

Query: 291 HRVAISIEKHPESWLKMVRKNG---HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +       +H       +R NG       EKE L    Q +E + +GLR++EG++ + +
Sbjct: 302 Y-------QHISDTDLYIRANGKLDQIEEEKETLDWNAQVEETMFLGLRMKEGVNKQKF 353


>gi|265766983|ref|ZP_06094812.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
 gi|263253360|gb|EEZ24836.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
          Length = 377

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G+  +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKGR--YIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRIYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLCEAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C    R     G +E +    
Sbjct: 296 EERDLATRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLE-IYEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|289425089|ref|ZP_06426866.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK187]
 gi|289427162|ref|ZP_06428878.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J165]
 gi|289154067|gb|EFD02755.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK187]
 gi|289159631|gb|EFD07819.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J165]
          Length = 393

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDFN++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 20  IYLHVPFCASRCGYCDFNTYVLS-AMGDDAVAGYLDAAHQELELAADALGDAQPPVSTIF 78

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 79  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 139 GMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRHSLDVT 198

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 199 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 258

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 259 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLGD 314

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 315 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 366

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 367 GTMEEGRLVLNLSGRMVADRIITDLLV 393


>gi|119963409|ref|YP_947979.1| coproporphyrinogen III oxidase [Arthrobacter aurescens TC1]
 gi|119950268|gb|ABM09179.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Arthrobacter aurescens TC1]
          Length = 409

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/391 (32%), Positives = 194/391 (49%), Gaps = 20/391 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMR---Q 64
           + G      G+YVH PFC  +C YCDFN++      G   Q+ +  + ++E+ +      
Sbjct: 22  LAGVEHRKFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYASTAVSELDFASLALD 81

Query: 65  LTG-PR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            +G PR  +S++FFGGGTP+L+  +++A IL     +W +    E+T EANP SV   + 
Sbjct: 82  ASGLPRRPLSTVFFGGGTPTLLPAEDLARILRAAVGHWGLEPGAEVTTEANPDSVTPESL 141

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +    AG  R+S G+QS     L+ L R H  S     +  AR     +S DLIY  P +
Sbjct: 142 RVLADAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPLVVQWAREAGLAVSLDLIYGTPGE 201

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +M  W++ L+ ALSY  DH+S Y L +E GT      + G++    ++     Y L   +
Sbjct: 202 SMADWQLSLETALSYQPDHISAYALIVEDGTKLAAQIRRGEVPGIDDDDHASKYELADKM 261

Query: 243 TSAHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            S  GL+ YE+SN S    ++  HNL YWR  D+ GIGPGAHS V      V     KHP
Sbjct: 262 ISEAGLNWYEVSNWSRTPEQACRHNLAYWRGDDWWGIGPGAHSHVG----GVRWWNVKHP 317

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            ++   +         +E L  E +  E +M+  RL  G+SV   + + GR+        
Sbjct: 318 TAYASRLGSGTSPAAGRETLDVETREVERIMLEARLGTGLSVDALDAI-GRH----AMAG 372

Query: 362 LQRQGFIERVQF--SRLRCTQRGMTMLDSVI 390
           L     ++ VQ    RL  T +G  + D+V+
Sbjct: 373 LIADELVDPVQAFKGRLVLTLKGRLLADAVV 403


>gi|163845807|ref|YP_001633851.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222523517|ref|YP_002567987.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
 gi|163667096|gb|ABY33462.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222447396|gb|ACM51662.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
          Length = 393

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/397 (32%), Positives = 199/397 (50%), Gaps = 32/397 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSIS------- 72
           +Y+H PFC ++C YCDFN++    +++  E ++ +   E+  +R    P   S       
Sbjct: 4   LYLHIPFCHRRCSYCDFNTYANMEHRI--EAYVDALCQELAMLRDQLPPLPASPEAAALR 61

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGV 130
            SIFFGGGTPS++ P  I  IL   A+   ++   EI++EANP +V   ++ +  R  G+
Sbjct: 62  PSIFFGGGTPSMLSPAQIERILQAAAEIVPLT-GAEISLEANPGTVLGRDYLRDLRSLGI 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQSL + +LR LGR H A+EA A+ + AR + F  ++ D I+ LP Q + QW  
Sbjct: 121 NRLSMGVQSLHDPTLRMLGRIHTAAEAYASFNDARAVGFESINLDFIFGLPGQDIEQWRA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   + + VDH++LY L +E+ T  Y     G L +P +++   +Y L   +  A G  
Sbjct: 181 TLTEIIRWEVDHIALYSLILEENTPLYAQVTAGRLQIPDDDLTGAMYELAMEMLGAAGYR 240

Query: 250 AYEISN----------HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            YEISN           +       HNL YW   DY+  G GAH  V    +     I  
Sbjct: 241 HYEISNWVRPSVSDRPDAPPALACQHNLAYWLNSDYLAAGAGAHGHVFPQRYANLRPI-- 298

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDI-- 356
             +S++  V+     + E   L+S   A E + MGLRL  G+    +    G++ LD   
Sbjct: 299 --DSYITAVQSGRRPIAETTLLTSADLAAETMFMGLRLDIGVGFAHFAARVGQSLLDYYG 356

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                L +QG IE     R+  T RG  + + V A+ 
Sbjct: 357 PTLEQLSQQGLIE-CSAQRVYLTPRGRMLGNQVFAHF 392


>gi|306831739|ref|ZP_07464896.1| coproporphyrinogen dehydrogenase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426164|gb|EFM29279.1| coproporphyrinogen dehydrogenase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 403

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 208/378 (55%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++Q+ + E +        + + +++ GGGTP
Sbjct: 36  YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLQALIREFESY----DIKQLRTLYIGGGTP 90

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SLGVQ+  
Sbjct: 91  TSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSLGVQTFN 150

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN S+  + I HL    F  +S DLIYALP QTM   +  + +A++  + 
Sbjct: 151 DKQLKRIGRSHNESQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKAIALDIP 210

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEISN +  G
Sbjct: 211 HLSLYSLILENHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEISNFTKPG 270

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E 
Sbjct: 271 FESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNARLSEEV 325

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER------NLQRQGFI---ERV 371
           L+ ++  +E L +GLR + G+S+  +E   G + +   ER       L +QG +   ++V
Sbjct: 326 LTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFE---ERYGQIVTELCQQGLLVPDDKV 382

Query: 372 QFSRLRCTQRGMTMLDSV 389
               +R T++G+ + D+V
Sbjct: 383 ----VRMTKKGLFLGDTV 396


>gi|257068889|ref|YP_003155144.1| coproporphyrinogen III oxidase, anaerobic [Brachybacterium faecium
           DSM 4810]
 gi|256559707|gb|ACU85554.1| coproporphyrinogen III oxidase, anaerobic [Brachybacterium faecium
           DSM 4810]
          Length = 389

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 193/392 (49%), Gaps = 28/392 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRS--- 70
             L VY+H PFC  +C YCDFN++      G   Q  +  + + EM     L   R+   
Sbjct: 9   GDLSVYIHVPFCAVRCGYCDFNTYTATELGGGGSQAEYPANAMAEMDL--TLAADRAAGY 66

Query: 71  ----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               IS++FFGGGTP+L+    +  +LD +     ++ + EIT EANP SV   +     
Sbjct: 67  EYEQISTVFFGGGTPTLLPADELVAMLDHLRTLIPLAPDAEITTEANPDSVTRASLSRLA 126

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             GV R+S+G+QS     L  L R H+  +   A+  AR     +S DLIY  P +T+  
Sbjct: 127 DGGVTRVSIGMQSAVPSVLATLDRTHDPEKVPQAVQWAREAGLDVSLDLIYGTPGETLAD 186

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            E  ++ ALS  VDH+S Y L IE  T   +  + G+L  P  +   D Y L   +  A 
Sbjct: 187 VETSVRSALSCGVDHMSAYSLIIEGNTAMARQLRRGELQEPDPDDMADKYELVDDLARAD 246

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI--EKHPES 303
           GL  YE+SN +   A+ S HNL YWR  D+ GIGPGAH       HR  +     KHP  
Sbjct: 247 GLSWYEVSNFARTPAQRSRHNLAYWRGTDWWGIGPGAH------RHRDGLRAWNVKHPSR 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           + +M+      V + E +++E +  E +M+ LR+ +G+ V    +   R   +   R+  
Sbjct: 301 YARMLAAGEMPVADSEHVAAEDRLTERIMLELRIVDGLPVD--VVPEARRPMLAVHRD-- 356

Query: 364 RQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
            +G ++    +  R   T+ G  + D+VI +L
Sbjct: 357 -RGHLDAAALADGRAVLTRSGRLLADAVIRDL 387


>gi|302333259|gb|ADL23452.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 374

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLLSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVSSRRFK 322


>gi|253581437|ref|ZP_04858662.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251836507|gb|EES65042.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 358

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 180/319 (56%), Gaps = 14/319 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KC YCDF S  +  +  ++ ++   L E+     L  P   ++++FGGG
Sbjct: 4   GIYIHIPFCLNKCNYCDFLS-FKSNEESRKKYVDYLLKEID----LYPPYKYNTVYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++ ++I    D I K   +  + E+T+E NP +V+ N     +K G+NR+S+G+QS
Sbjct: 59  TPSLLDFEDI----DRILKKLDIEEDAEVTLEVNPKTVDYNKLVQLKKIGINRLSIGIQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ LR LGR H++ E I   + AR   F  +S DL+++LP Q++ + E +L++ LS  
Sbjct: 115 FDEKYLRILGRMHSSEEGIETYYNARKAGFENISLDLMFSLPGQSVEEVENDLKKLLSIK 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L  E+GT+F++  K G L      +  D++     I    G   YEISN S 
Sbjct: 175 PEHFSIYSLIWEEGTVFFEKLKKGLLRETENEIEADMFEKIIDIAEKAGYIHYEISNFSL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E++HN  YW   +Y+GIG GA   +    ++  +   ++  S    +   G  ++EK
Sbjct: 235 PQKEAIHNTKYWENKEYLGIGLGASGYIDNLRYKNQMKFLEYYGS----IESKGKPIIEK 290

Query: 319 EFLSSEQQADEFLMMGLRL 337
           E L+S+++ +   ++G RL
Sbjct: 291 ERLTSKEKEEYKYILGFRL 309


>gi|222153229|ref|YP_002562406.1| coproporphyrinogen III oxidase [Streptococcus uberis 0140J]
 gi|222114042|emb|CAR42401.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus uberis 0140J]
          Length = 376

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 204/378 (53%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E +        +S+ +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIQEFRSYE----IKSLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + ++  +S   E TIEANP  ++ +  Q  +K+ VNRISLGVQ+  
Sbjct: 64  TAITASQLDYLLTELVRDLDLSKLEEFTIEANPGDLDQDKIQVLKKSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++    I  L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 DKHLKQIGRSHNEAQIYTTIDSLKAAGFHNISIDLIYALPGQTLEQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN S  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFSKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HNL YW   +Y G G GA   +    +R  + I    + +LK V + G+A + +E 
Sbjct: 244 YYSQHNLMYWDNDEYYGCGAGASGYLNGVRYRNRVPI----QHYLKAVSE-GNARLTEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR----- 375
           L+ ++  +E L +GLR + G+SV  +E   G + D       QR G I +    +     
Sbjct: 299 LTQDEMIEEELFLGLRKKSGVSVARFEEKFGLSFD-------QRYGHIVQELIGQGLLVN 351

Query: 376 ----LRCTQRGMTMLDSV 389
               +R T++G+ + DSV
Sbjct: 352 DPKTVRMTKKGLFLGDSV 369


>gi|23099426|ref|NP_692892.1| coproporphyrinogen III oxidase [Oceanobacillus iheyensis HTE831]
 gi|22777655|dbj|BAC13927.1| coproporphyrinogen oxidase III (oxygen-independent) [Oceanobacillus
           iheyensis HTE831]
          Length = 391

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 194/379 (51%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            VY+H PFC + C YC+F  +    +   +++I++ + E+     + G    + +I+ GG
Sbjct: 6   AVYIHIPFCKQICHYCNFVKYFYM-ENKADDYIEALIHEIDCT--VIGYNVHVDTIYMGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  + + + + + + S  E TIE NP  ++    Q     GVNR+S GVQ
Sbjct: 63  GTPTALNIQQLKKLFNFLGRKFNLESCKEFTIEINPGDIDHEKAQLLSSYGVNRVSFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +++  LR +GR H   +    + L  +N F  +S DLIYALP QT+  +E  L  AL +
Sbjct: 123 VMDDDMLRKIGRMHCVKDVYETVDLLTKNDFRNISLDLIYALPNQTVEHFEKTLHDALQF 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L IE  T+F+     G L  P E+  V++Y + Q      G+  YEISN +
Sbjct: 183 GLPHYSTYALQIEPKTVFFHKQNKGQLQRPPEDAEVEMYRILQHEMKKRGIRQYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +     R + S  K   ++++  ++ G A+ E
Sbjct: 243 KPGYESKHNLTYWNNDYYYGFGAGAHGYIP--GKRTSNS--KPLGTYMRAAKEEGSAIDE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
            E ++ + Q +E L + LR   GI  K +E   G +L+   E+ LQ    QG + R+   
Sbjct: 299 IEEITKKDQIEEELFLQLRKTSGIDKKMFEQKYGVSLEQLYEKELQDLLEQGLL-RLIDG 357

Query: 375 RLRCTQRGMTMLDSVIANL 393
             R T RGM + D V +  
Sbjct: 358 NYRLTDRGMLLGDQVFSKF 376


>gi|313764581|gb|EFS35945.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL013PA1]
 gi|313792271|gb|EFS40372.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA1]
 gi|313801779|gb|EFS43013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA2]
 gi|313807390|gb|EFS45877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL087PA2]
 gi|313816121|gb|EFS53835.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL059PA1]
 gi|313818438|gb|EFS56152.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL046PA2]
 gi|313820200|gb|EFS57914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL036PA1]
 gi|313822991|gb|EFS60705.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL036PA2]
 gi|313825080|gb|EFS62794.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL063PA1]
 gi|313827980|gb|EFS65694.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL063PA2]
 gi|313838608|gb|EFS76322.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL086PA1]
 gi|314915577|gb|EFS79408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA4]
 gi|314918469|gb|EFS82300.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA1]
 gi|314919957|gb|EFS83788.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA3]
 gi|314925429|gb|EFS89260.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL036PA3]
 gi|314931970|gb|EFS95801.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL067PA1]
 gi|314955839|gb|EFT00239.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL027PA1]
 gi|314958319|gb|EFT02422.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL002PA1]
 gi|314960126|gb|EFT04228.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL002PA2]
 gi|314962932|gb|EFT07032.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL082PA1]
 gi|314967994|gb|EFT12093.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL037PA1]
 gi|314978332|gb|EFT22426.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL072PA2]
 gi|314987776|gb|EFT31867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA2]
 gi|314990055|gb|EFT34146.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA3]
 gi|315078146|gb|EFT50197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL053PA2]
 gi|315084441|gb|EFT56417.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL027PA2]
 gi|315085781|gb|EFT57757.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL002PA3]
 gi|315088801|gb|EFT60777.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL072PA1]
 gi|315098410|gb|EFT70386.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL059PA2]
 gi|315101233|gb|EFT73209.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL046PA1]
 gi|315108457|gb|EFT80433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL030PA2]
 gi|327332063|gb|EGE73800.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL096PA3]
 gi|327443266|gb|EGE89920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL013PA2]
 gi|327450906|gb|EGE97560.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL087PA3]
 gi|327453015|gb|EGE99669.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL092PA1]
 gi|327453745|gb|EGF00400.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL083PA2]
 gi|328753594|gb|EGF67210.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL020PA1]
 gi|328754328|gb|EGF67944.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL087PA1]
 gi|328754421|gb|EGF68037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL025PA2]
          Length = 397

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDFN++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 24  IYLHVPFCASRCGYCDFNTYVLS-AMGDDAVAGYLDAAHQELELAADALGDAQPPVSTIF 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 83  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 143 GMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRHSLDVT 202

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 203 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 262

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 263 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLGD 318

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 319 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 370

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 371 GTMEEGRLVLNLSGRMVADRIITDLLV 397


>gi|257425708|ref|ZP_05602132.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257428369|ref|ZP_05604767.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257431006|ref|ZP_05607386.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433694|ref|ZP_05610052.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436608|ref|ZP_05612652.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M876]
 gi|282914390|ref|ZP_06322176.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M899]
 gi|282924684|ref|ZP_06332352.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C101]
 gi|293503464|ref|ZP_06667311.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293510481|ref|ZP_06669187.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M809]
 gi|293531021|ref|ZP_06671703.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|257271402|gb|EEV03548.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275210|gb|EEV06697.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257278436|gb|EEV09072.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281787|gb|EEV11924.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283959|gb|EEV14082.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M876]
 gi|282313519|gb|EFB43914.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C101]
 gi|282321571|gb|EFB51896.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M899]
 gi|290920289|gb|EFD97355.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095130|gb|EFE25395.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291466845|gb|EFF09365.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M809]
          Length = 385

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDVLTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVSSRRFK 333


>gi|227486722|ref|ZP_03917038.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227235310|gb|EEI85325.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 373

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 200/374 (53%), Gaps = 16/374 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N +G Y+H PFC KKC YCDF +     K   E ++++ + E++  R+      I SI+ 
Sbjct: 2   NRVGAYIHIPFCEKKCYYCDFAAFPNLEK-WIEPYVENLIKEIRLYRERMDV-IIDSIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS I+ + I  I   I + +    ++ E TIEANP S+++   + YR  G+NR+SL
Sbjct: 60  GGGTPSYIDSKFIEKI---IGEVYKFKHDIKEFTIEANPKSLDMEKLKIYRDLGINRVSL 116

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS + + L+ +GRNH +  AI  I + R   F  +SFDL+  LP Q  +  + +L   
Sbjct: 117 GVQSFDNEVLKNIGRNHTSQIAIRDIEMIREAGFTNLSFDLMLNLPGQDFSSVKRDLDMV 176

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                +H+S Y L ++KG+ FY + K G L L  +++ VD+++         GLH YE+S
Sbjct: 177 KKLKPNHISWYSLILDKGSKFYALDKQGKLSLMDDDLEVDIFSYLIDELEKVGLHRYEVS 236

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HN  YW    Y+G+G  A   +    +    ++  +     KM++ N   
Sbjct: 237 NFAKKGFESFHNKKYWNQEGYLGLGIAAAGYLSNLRYNNTPNLAIYD----KMLKANKLP 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERV 371
           ++ K+F+   +   E+++  LR  EGI + +++   G +   +  R + +    GF E  
Sbjct: 293 IINKDFIDKNENEKEYIIFKLRESEGIDLSEFKNRYGVDFLKKYARQISKFRDDGFFEID 352

Query: 372 QFSRLRCTQRGMTM 385
             S +R T++GM++
Sbjct: 353 --SAIRFTKKGMSL 364


>gi|60683089|ref|YP_213233.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
 gi|60494523|emb|CAH09320.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
          Length = 377

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G+  +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKGR--YIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLREAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C    R     G +E +    
Sbjct: 296 EERDLTTRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLE-IYEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|300853981|ref|YP_003778965.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           ljungdahlii DSM 13528]
 gi|300434096|gb|ADK13863.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           ljungdahlii DSM 13528]
          Length = 382

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 175/339 (51%), Gaps = 16/339 (4%)

Query: 14  QGSN-----SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           QG N     ++ +Y+H PFC KKC YCDF S+      G+E  + S+   +    +  G 
Sbjct: 2   QGKNIDVKKAVALYIHIPFCKKKCLYCDFPSYS-----GKEKLMVSYTKALARDIESVGD 56

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R I +IF GGGTP+ +  ++   I + + K      N+E T+E NP +   + F+  RK 
Sbjct: 57  RKIRTIFIGGGTPTYLSLESWNNIYE-VLKKINTEDNLEFTVEGNPGTFTEDKFKVLRKM 115

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR+S+G+Q+ +   L+ +GR H   + +    +AR   F  ++ DL++ LP QT+  W
Sbjct: 116 GVNRLSIGLQAWQNSILKCIGRIHTLEDFLKTYDMARKFGFSNINIDLMFGLPGQTIKDW 175

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  LQ  +    +H+S Y L +EKGT FY  H+   L LP E     +Y  T    S  G
Sbjct: 176 KESLQNVVKLNPEHISCYSLIVEKGTPFYNAHQSKSLNLPGEEEERQMYYFTLDFLSKMG 235

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN S    +  HNL YW   +YIG G GAHS V    +R      K+ E ++  
Sbjct: 236 YEQYEISNFSKKDRKCKHNLIYWDMEEYIGCGAGAHSYVDGYRYRNT----KNIEEYILQ 291

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              N    ++K   S     +EF+ MGLR  +GIS +D+
Sbjct: 292 GNLNQFLRLDKHKNSICDSMEEFVFMGLRKIDGISTEDF 330


>gi|301164603|emb|CBW24162.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 638R]
          Length = 377

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G+  +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKGR--YIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRIYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLREAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C    R     G +E +    
Sbjct: 296 EERDLATRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLE-IYEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|313837301|gb|EFS75015.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL037PA2]
 gi|314928025|gb|EFS91856.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL044PA1]
 gi|314971797|gb|EFT15895.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL037PA3]
          Length = 398

 Score =  202 bits (514), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 196/384 (51%), Gaps = 19/384 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQL--TGPRSISSIFF 76
           +Y+H PFCV +C YCDFN++V      V    ++++   E++    +   G   +S+IFF
Sbjct: 25  IYLHVPFCVSRCGYCDFNTYVLSAMGNVAVAGYLKAVHRELELAADVLGAGQPPVSTIFF 84

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  +  ++D I   W    N EIT EANP ++      G  KAG+NR+S+G
Sbjct: 85  GGGTPTMLSPVQLGELVDHIRTLWGTDLNAEITTEANPETLSGEVLAGLLKAGINRLSMG 144

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +E  L  L R H    A+    LAR + F  +S DLI+  P +++  W   L  AL
Sbjct: 145 MQSADEFVLTVLDRRHRPGRAVEMAQLARQMGFDDVSLDLIFGAPGESLDSWWHSLDVAL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   DH+S Y L IE+GT      + G+L +  E+   D Y L + I +  G   YE+SN
Sbjct: 205 TAEPDHISAYSLIIEEGTRLAGRIRRGELPMTDEDDLADKYLLAERILTEAGYVNYEVSN 264

Query: 256 ----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
                +       HN+ YW   D+ G+GPGAHS +  G+    +   KHP ++  ++R+ 
Sbjct: 265 WARPRNGRDHRCRHNMAYWLGHDWWGVGPGAHSHI-AGTRWWNV---KHPATYRSLLRER 320

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              V   E L   Q+ +E +++ LRL +G+ + D   +         E+ L   G IE  
Sbjct: 321 KLPVDGYEVLDDVQRHEETVLLRLRLSDGLPMTDLPRVERMRAAKVVEQGL---GTIEE- 376

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              RL     G  + D +IA+L +
Sbjct: 377 --GRLVLNLSGRMVADRIIADLLI 398


>gi|218516541|ref|ZP_03513381.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 162

 Score =  202 bits (514), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 85/147 (57%), Positives = 111/147 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKETAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVAAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEA 157
           NR+SLGVQ+L ++ L+FLGR H+ ++A
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADA 162


>gi|296119872|ref|ZP_06838426.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295967026|gb|EFG80297.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 395

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 195/387 (50%), Gaps = 25/387 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-----RS 70
           ++S G+Y+H PFC  +C YCDFN++         +    +L  ++  R+L        R 
Sbjct: 19  TDSFGLYIHVPFCATRCGYCDFNTYTPGELGSPHDLTGPYLNALE--RELEKAAEKVNRP 76

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +IF GGGTPSL+  + +  +L+    ++ +S + EIT E+NP S     F+  ++AG 
Sbjct: 77  ADTIFVGGGTPSLLGGEGLTRVLNAARNSFGISPDAEITTESNPESTSPEFFEQIKEAGF 136

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            R+SLG+QS     L+ L R H      AA   A+   F  ++ D+IYA P +T      
Sbjct: 137 TRVSLGMQSAASHVLQILERAHTPGRPFAAAREAKAAGFEHVNLDMIYATPTETDDDVRR 196

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  AL   VDH+S Y L +E GT   +  K G+L  P ++     Y +  S     G  
Sbjct: 197 TLDLALETGVDHISAYSLIVEDGTRMARKVKKGELPAPDQDTMAKRYEIIASRLDDAGFG 256

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN +  G E  HN+ YWR  ++ G GPGAHS   +G+ R      K P  ++KM+ 
Sbjct: 257 WYEVSNWAKEGGECRHNMIYWRDQEWWGAGPGAHSH--IGNERFYNV--KLPGRYIKMLG 312

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            +   + + E L+  +   E +M+GLRLREGI          R+L ++  + +    FI+
Sbjct: 313 DDELPIADSETLTESENHMEKIMLGLRLREGID---------RSLLLDAAQPMV-DSFID 362

Query: 370 R---VQFSRLRCTQRGMTMLDSVIANL 393
           R   V   RLR T+ G  + D +I +L
Sbjct: 363 RGLLVDDGRLRVTKAGRLLADGIITDL 389


>gi|332675311|gb|AEE72127.1| putative oxygen-independent coproporphyrinogen-III oxidase
           [Propionibacterium acnes 266]
          Length = 407

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDFN++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 34  IYLHVPFCASRCGYCDFNTYVLS-AMGDDAVAGYLDAAHQELELAADALGDAQPPVSTIF 92

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 93  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 153 GMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRHSLDVT 212

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 213 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 272

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 273 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLGD 328

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 329 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 380

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 381 GTMEEGRLVLNLSGRMVADRIITDLLV 407


>gi|269797939|ref|YP_003311839.1| oxygen-independent coproporphyrinogen III oxidase [Veillonella
           parvula DSM 2008]
 gi|294791820|ref|ZP_06756968.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 6_1_27]
 gi|269094568|gb|ACZ24559.1| oxygen-independent coproporphyrinogen III oxidase [Veillonella
           parvula DSM 2008]
 gi|294457050|gb|EFG25412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 6_1_27]
          Length = 394

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 186/334 (55%), Gaps = 9/334 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQ--LTGPRSISSI 74
            +G+YVH PFC +KC YCDF ++ +  +   E ++ + + E+  W+ +   +  ++I +I
Sbjct: 15  DMGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEIDLWVSEHPESTSKAIDTI 73

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP+ +  Q + +ILD I   +T++ +  +TIE+NP  V ++      K G NRIS
Sbjct: 74  YFGGGTPTELSIQQLQMILDKIKNTFTITDDCHMTIESNPGEVNLHYLTKLVKLGFNRIS 133

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ+ +++ L  L R+HN  +A  A++ A+   F  ++ DLIY LP+QT+   +  L  
Sbjct: 134 FGVQTFDDKLLTMLHRSHNGEQAKQAVYDAKEAGFTDINIDLIYGLPRQTLEDIQYNLDI 193

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                ++H+S Y L +E GT  Y + +   + +PSE +   +Y++      A G   YEI
Sbjct: 194 VKDLPINHISTYGLQVEVGTYLYHLVQKNLISIPSETIDESMYDMMMDGLKALGFERYEI 253

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +   + S HNL YW Y DY+G G GAHS    G  R   S  ++   +++ V +   
Sbjct: 254 SNFAKTNSYSRHNLKYWHYVDYLGFGAGAHSFYD-GVRR---SNNRNVMPYIQSVDRYIM 309

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             ++ E ++ E+  ++F  + LR + G+  + +E
Sbjct: 310 PTIDTETITLERAQEDFCFLALRTKWGLDERKFE 343


>gi|325290545|ref|YP_004266726.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965946|gb|ADY56725.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 393

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 193/352 (54%), Gaps = 21/352 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGPRSI 71
           +YVH PFCVKKCPYC F S V     G+E+         +++    E+   RQ   P  +
Sbjct: 4   LYVHVPFCVKKCPYCAFYS-VALAPNGKEDKNRSVLIRKYLEGIRKEISLRRQ-DAPGGV 61

Query: 72  SSIFFGGGTPSLIEPQNIA--LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           SS+F GGGTPS+++   +   LIL G           E TIE NP ++     Q  +  G
Sbjct: 62  SSLFIGGGTPSVLDEGELKELLILIGEIAGRN-DGRTERTIECNPGTINEKKAQILQAFG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           +NR+SLGVQ+L++  L+ +GR H   +   A+ + R      ++ DL++ LP QTM +W 
Sbjct: 121 INRVSLGVQALDDGFLKEIGRIHGVKQVEEAVKIIRGAGIDNLNLDLMFGLPGQTMEKWF 180

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMH-KDG----DLVLPSENVAVDLYNLTQSIT 243
             L++A+++   HLSLY LT+E+ T F + +  DG    ++ LP +++  D+Y     + 
Sbjct: 181 ETLEKAIAFKPQHLSLYALTLEEETPFGREYGSDGAGKANVCLPDDDLQADMYEGAVELL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN +  G E  HNL+YWR   Y+G+GPGA S +K    +   S++++  +
Sbjct: 241 ETAGYARYEISNFALPGYECRHNLSYWRGDQYLGLGPGAVSCLKGVRSKNIDSLDQYNLN 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +   +   A  ++E+L+ EQ   EF+M+GLR  EGI+ + +     RN++
Sbjct: 301 LAEGYARQAQA-EDREYLTEEQMISEFMMLGLRTAEGIAFETFYGKFQRNIE 351


>gi|298694865|gb|ADI98087.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus ED133]
          Length = 374

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 175/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVSSRRFK 322


>gi|323359825|ref|YP_004226221.1| coproporphyrinogen III oxidase [Microbacterium testaceum StLB037]
 gi|323276196|dbj|BAJ76341.1| coproporphyrinogen III oxidase [Microbacterium testaceum StLB037]
          Length = 405

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 203/394 (51%), Gaps = 20/394 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQL-- 65
           ++T   S   GVY+H PFC  +C YCDFN++      G  Q++F  +   E++   ++  
Sbjct: 20  DLTIDPSTDFGVYLHVPFCRVRCGYCDFNTYTASELRGARQDDFADTLAAEVRLAGRVMD 79

Query: 66  -TGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             G R + S++FFGGGTP+L+ P ++A +LD +   + ++   E+T+EANP +V+    +
Sbjct: 80  AAGSRRVASTVFFGGGTPTLLPPGDLARMLDAVRAEFGIADGAEVTVEANPDTVDDAVME 139

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
               AGV R+S+G+QS     L  L R H+ +    A+  AR     +S DLIY  P ++
Sbjct: 140 TLAAAGVTRVSIGMQSARTHVLAALDRTHDPANVATAVAAARRAGLDVSLDLIYGAPGES 199

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L+ A     DH+S Y L +E GT   +  + G +  PS+++  D+Y L   + 
Sbjct: 200 LDDWRASLEAAAVLEPDHISAYALIVEDGTKLARQIRSGAVAEPSDDLQADMYELADELL 259

Query: 244 SAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +  G   YE+SN S  +   S HNL YWR  D+ G GPGAHS V  G     +   KHP 
Sbjct: 260 ADAGYDWYEVSNWSRGVPHRSRHNLAYWRGTDWWGFGPGAHSHV-AGLRWWNV---KHPA 315

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDIECERN 361
           ++ + +         +E      +  E +++  R+REG++V   E+L  GR    +   +
Sbjct: 316 AYAQRLAAEESPAAARERPDETARRLESVLLRSRIREGLAVS--ELLGEGR----KAVAS 369

Query: 362 LQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           L   G +E     R R   T+RG  + D+V+  L
Sbjct: 370 LIADGLVEGPDAVRGRIVLTRRGRLLADAVVRAL 403


>gi|325963351|ref|YP_004241257.1| coproporphyrinogen III oxidase anaerobic [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469438|gb|ADX73123.1| coproporphyrinogen III oxidase, anaerobic [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 393

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 185/389 (47%), Gaps = 20/389 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG-- 67
           G    + G+YVH PFC  +C YCDFN++      G   Q+ +  +  +E+    ++    
Sbjct: 8   GAADRAFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYAGTAASEVALAAKVLAGS 67

Query: 68  ---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R +S++FFGGGTP+L+   ++ALIL      W +    E+T EANP SV   +   
Sbjct: 68  GLPARKLSTVFFGGGTPTLLPADDLALILRRAIDEWGIEDGAEVTTEANPDSVTPESLAV 127

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            ++AG  R+S G+QS     L+ L R H  S     +  AR     +S DLIY  P +++
Sbjct: 128 LKEAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPQVVQWAREAGLAVSLDLIYGTPGESL 187

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L+ ALSY  DH+S Y L +E GT      + G++    ++   D Y L   + +
Sbjct: 188 ADWRHSLETALSYRPDHISAYALIVEDGTKLAAQMRRGEVPGIDDDDHADKYELADQLIT 247

Query: 245 AHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
             GL  YE+SN +   G    HNL YWR  D+ GIGPGAHS V      V     KHP +
Sbjct: 248 EAGLGWYEVSNWARTPGQACRHNLAYWRGDDWWGIGPGAHSHVG----GVRWWNVKHPTA 303

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   + +       +E L +E +  E +M+  RL+ G+ +        R +       L 
Sbjct: 304 YAGRLAQGLSPAAGRETLDAETRNIERVMLEARLKSGLQLSTLAAAGRREV-----AGLI 358

Query: 364 RQGFIERVQF--SRLRCTQRGMTMLDSVI 390
             G +E        L  T +G  + D+V+
Sbjct: 359 ADGLVEPAAALNGTLVLTLKGRLLADAVV 387


>gi|224282947|ref|ZP_03646269.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 469

 Score =  202 bits (513), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 192/416 (46%), Gaps = 47/416 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           +Y+H PFC+++C YCDFN++          + N+    + EM+ +R       +  P  +
Sbjct: 46  IYIHVPFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEP-PV 104

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + GV 
Sbjct: 105 STVFFGGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGVT 164

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   +
Sbjct: 165 RVSFGMQSAVPHVLKTLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSV 224

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  Y
Sbjct: 225 RTAVDLGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWY 284

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--------------GSHRVAISI 297
           EISN S  G ES HNL YWR  D+ G+GPGAHS   +               +  V+ S+
Sbjct: 285 EISNWSRPGYESRHNLGYWRNVDWAGLGPGAHSHYNMVMGSSTDGDAANSDAAGDVSASV 344

Query: 298 EK---------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV----- 343
                      HP  W   +          E +S  +  +E +M+GLR+REG+ +     
Sbjct: 345 TSTSMRGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNR 404

Query: 344 --------KDWEMLAGRNLDIECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVI 390
                   +D      R +D  C   L   G I           T+RG  + D+VI
Sbjct: 405 HIEAVNRAQDAAQGTLRIIDDACLTPLVGDGLITLDPTTGHAVATRRGRLLNDAVI 460


>gi|227874460|ref|ZP_03992636.1| possible coproporphyrinogen dehydrogenase [Oribacterium sinus
           F0268]
 gi|227839688|gb|EEJ50142.1| possible coproporphyrinogen dehydrogenase [Oribacterium sinus
           F0268]
          Length = 435

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 212/427 (49%), Gaps = 54/427 (12%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSI 71
           +G   L +Y+H PFC +KC YCDF S   + +  +  ++     E++W  +    G   +
Sbjct: 14  RGKKPLALYLHIPFCARKCAYCDFLSFPSK-EEQKIAYMAKLREELEWRSRDFQKGQYEV 72

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+F GGGTPS + P+ I   ++ I   + + S+ E +IE NP S      + Y ++G+N
Sbjct: 73  LSLFIGGGTPSAVPPEEIEKTMEVIRNCYPIYSHWEASIECNPESASKEALEAYLRSGIN 132

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S G+QS +E+ LRFLGR H  S  + A   AR + F  +S DL+  +P QT   ++  
Sbjct: 133 RLSFGLQSTQEEELRFLGREHQFSTFLTAYQEARKLGFKNISIDLMNGIPLQTPESYKKT 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+       +HLS+Y L IEKGT FY + K+G L LPSE   +++  LT+  T   G+  
Sbjct: 193 LKNISLLKPEHLSIYNLIIEKGTRFYALAKEGKLPLPSEEELLEMDALTKEWTKKMGMSP 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIG----------------------------PGA 282
           YE+SN++  G  S+HN  YW    Y+G G                             G 
Sbjct: 253 YEVSNYAKEGFFSVHNYGYWSNVPYLGFGIHSSSYFQHKRWKNTNKLPLYLSLPFFEKGD 312

Query: 283 HSRVKVGSHRVAISIEK--HPESWLKMVRKNGHAVVEKEF------LSSEQQADEFLMMG 334
            S V+ G   V  S+++     ++L + ++  H  +E++       L+ E++ +EF  +G
Sbjct: 313 SSAVQSGQRPVEKSLDETFSSSTFLSLQKQKSHPSIEEQLCEDVQVLTKEEEMEEFFYLG 372

Query: 335 LRLREGIS----VK----DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           LR   G+S    VK    D   + G  L+ +C     ++G++     +  R T+ GM + 
Sbjct: 373 LRRTAGVSEIDFVKRFSVDMHKIFGAVLEKQC-----KEGYLLHDN-AHYRFTEVGMNLS 426

Query: 387 DSVIANL 393
           + ++A  
Sbjct: 427 NVLLAEF 433


>gi|269792377|ref|YP_003317281.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100012|gb|ACZ18999.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 366

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 196/384 (51%), Gaps = 31/384 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISS 73
           G   + +YVH PFC +KC YC F S     K  QE +++    EM  W RQL  PR + +
Sbjct: 2   GERGISIYVHVPFCTRKCLYCSFPS-APMGKGDQEAYLEGLSKEMGSWSRQLRRPR-VHT 59

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVN 131
           I+FGGGTPS + P     ++  + +++ +S   EIT EANP S+ V+  + + +   G  
Sbjct: 60  IYFGGGTPSKLSPGGWERLMGDLGQSFDLSGVREITFEANPESLGVDLLKCWTEVSPGPL 119

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQS  ++ LR LGR H AS+A+ A  +       +S DL++ LP Q++  +   L
Sbjct: 120 RVSLGVQSFLDRELRRLGRVHTASDAVRASEMVLRAGIPLSVDLMFRLPGQSLRDFSYSL 179

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   VDHLS Y+LT+E+GT F  M    DL LP +      Y   Q      G   Y
Sbjct: 180 KMAVGLGVDHLSAYELTVEEGTPFGDM----DLELPPDGYG--FYRYLQWYLGRRGFVQY 233

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE--SWLKMVR 309
           E+SN +  GA  +HNL YW  GD++G+GPGA S   +G  R       HP    WL++V 
Sbjct: 234 EVSNFARPGAFRVHNLRYWLGGDFLGLGPGAWS--CIGEARYG----NHPSLGGWLRLVE 287

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            +G      E L   ++  E  ++ LR   G + +      GR+  + C R     G + 
Sbjct: 288 ASGRGTCCGEILEGARRRAERAILALRTSFGWAPE------GRDDPLAC-RLEPLMGDLV 340

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
            +Q  R   T RG       +ANL
Sbjct: 341 ALQGGRYVLTPRGFR-----VANL 359


>gi|53715153|ref|YP_101145.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
 gi|52218018|dbj|BAD50611.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
          Length = 377

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G+  +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKGR--YIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLREAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFEQ 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C    R     G +E +    
Sbjct: 296 EERDLTTRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLE-IYEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|29832109|ref|NP_826743.1| coproporphyrinogen III oxidase [Streptomyces avermitilis MA-4680]
 gi|29609227|dbj|BAC73278.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces avermitilis MA-4680]
          Length = 410

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 193/396 (48%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++  R
Sbjct: 22  LAGAAERPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYAETLIDEVRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 82  KVLGDDPRPVRTVFVGGGTPTLLAADDLVRMLGAVRDEFGLADDAEVTTEANPESVDPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R  G NR+S G+QS  +  L+ L R H        +  AR   F  ++ DLIY  P
Sbjct: 142 LATLRAGGFNRVSFGMQSARQHVLKVLDRTHTPGRPERCVAEARAAGFDHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +  
Sbjct: 202 GETDDDWRASLDAALGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAD 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            I S+ G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 EILSSAGFDWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E LS E +  E +++ LRLREG  +    +L  R   +   
Sbjct: 318 HPGAYAGALAAGKSPGAGRELLSEEDRRVERVLLELRLREGCPLS---LL--RPDGLAAS 372

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G +E   +       T RG  + D+V+ +L
Sbjct: 373 RRALSDGLLEPGPYDAGHAVLTLRGRLLADAVVRDL 408


>gi|291456707|ref|ZP_06596097.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium breve DSM 20213]
 gi|291381984|gb|EFE89502.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium breve DSM 20213]
          Length = 437

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 202/426 (47%), Gaps = 57/426 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKSTKQWQLDHGIAEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD I K W ++SN EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAIRKTWGIASNAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 AAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR--------------------------- 285
           +SN +  G ES HNL YWR  D+ G+GPGAHS                            
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGVGPGAHSHYNNVTEIDRPQSALLTAPASGGTTEAI 303

Query: 286 --------VKVGSHRVAISIE------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
                    + G   V +S         HP  W   + ++     + E +++E+  +E +
Sbjct: 304 APAGGGCPAEAGLGVVPVSHGLRSWDIAHPRLWGTAINEHRIPWADSEAITAEENLEELI 363

Query: 332 MMGLRLREGI-------SVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
           M+GLRLREG+       ++   E  + + + ++  R +  +G I  +  +R+  T+RG  
Sbjct: 364 MLGLRLREGLDLGRINQAIAANENTSWQTIAVDPLRPMVDEGLIT-ISGNRVIPTRRGRL 422

Query: 385 MLDSVI 390
           + DSVI
Sbjct: 423 LNDSVI 428


>gi|310659100|ref|YP_003936821.1| coproporphyrinogen III oxidase [Clostridium sticklandii DSM 519]
 gi|308825878|emb|CBH21916.1| coproporphyrinogen III oxidase [Clostridium sticklandii]
          Length = 386

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 180/331 (54%), Gaps = 9/331 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y H PFC+ KC YCDF S         E +I + L E+   +       IS+IF GG
Sbjct: 9   LSLYFHIPFCLSKCSYCDFVSFANS-TAFHEPYINALLKELLLYKSTIDKNQISTIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GTP+ +      L++  I +   +   S+N+E TIEANP ++        ++ G+NR+SL
Sbjct: 68  GTPTSLSDNLFELLIKSIDEILQLNCNSNNIEYTIEANPKTITSKKADTMKQYGINRVSL 127

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  E  L+ L R H+  +   +I + + +    ++ DL+YA+  QT+  ++  +Q+ 
Sbjct: 128 GLQSANEIELKVLNRIHSFKDLEESIDILKAHGISNINIDLMYAIANQTIESFKTSIQKV 187

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT  YK+HK+  +  P+E+  +++Y L  ++ ++ G   YEIS
Sbjct: 188 LALKPDHISCYSLILEEGTALYKLHKENKITFPTEDEDINMYELAVNMLTSAGYEHYEIS 247

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +  HN+ YW+   Y+G G  +HS      +    SIE+    ++ ++ KN   
Sbjct: 248 NFALSGRKCSHNITYWKVKPYLGFGVSSHSFFDNSRYSNTSSIEE----YIDLLSKNSLP 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +   E +      +E++ + LR++EGI+ +D
Sbjct: 304 IESTELIDDTMAFEEWIFLRLRMKEGINFED 334


>gi|253566285|ref|ZP_04843739.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
 gi|251945389|gb|EES85827.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
          Length = 377

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G+  +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKGR--YIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEFLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLHEAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C    R     G +E +    
Sbjct: 296 EERDLATRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLE-IYEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|168486104|ref|ZP_02710612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1087-00]
 gi|183570777|gb|EDT91305.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1087-00]
          Length = 376

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 210/375 (56%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  +++++  L E +          +S+++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DSYLEHLLEEFRSY----DIEKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +    E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLYVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNACIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
           ++ LS ++Q +E + +GLR + G+S+  +E   G++   L  E  R+L +QG ++ ++  
Sbjct: 296 EDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLMQ-IEGD 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+RG+ + D+V
Sbjct: 355 HVRMTKRGLFLGDTV 369


>gi|298483619|ref|ZP_07001794.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D22]
 gi|298270189|gb|EFI11775.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D22]
          Length = 376

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 199/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++    + I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTRYVQALCRELTMRKEYLKGKDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I +++ ++   EIT+EANP  +     +       NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGISYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEYN-GA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|288905645|ref|YP_003430867.1| coproporphyrinogen III oxidase [Streptococcus gallolyticus UCN34]
 gi|288732371|emb|CBI13943.1| putative coproporphyrinogen III oxidase [Streptococcus gallolyticus
           UCN34]
          Length = 376

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 210/379 (55%), Gaps = 29/379 (7%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  ++++Q+ + E +        + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DDYLQALIREFESY----DIKQLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SLGVQ+ 
Sbjct: 63  PTSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+HN ++  + I HL    F  +S DLIYALP QTM   +  + +A++  +
Sbjct: 123 NDKQLKRIGRSHNEAQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E
Sbjct: 243 GFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNARLSEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER------NLQRQGFI---ER 370
            L+ ++  +E L +GLR + G+S+  +E   G + +   ER       L +QG +   ++
Sbjct: 298 VLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFE---ERYGQIVIELCQQGLLVPDDK 354

Query: 371 VQFSRLRCTQRGMTMLDSV 389
           V    +R T++G+ + D+V
Sbjct: 355 V----VRMTKKGLFLGDTV 369


>gi|116670786|ref|YP_831719.1| coproporphyrinogen III oxidase [Arthrobacter sp. FB24]
 gi|116610895|gb|ABK03619.1| coproporphyrinogen III oxidase, anaerobic [Arthrobacter sp. FB24]
          Length = 409

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 189/389 (48%), Gaps = 20/389 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWM-RQLTGP 68
           G      G+YVH PFC  +C YCDFN++      G   Q+ +  + + E+++  + L G 
Sbjct: 24  GAAQRRFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYASTAIAEVEFAAKALQGS 83

Query: 69  ----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R + ++FFGGGTP+L+  +++A IL      W +    E+T EANP SV   + Q 
Sbjct: 84  GLPERRLGTVFFGGGTPTLLPAEDLARILTAAVSQWGLEPGAEVTTEANPDSVTPESLQL 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AG  R+S G+QS     L+ L R H  S     +  AR+    +S DLIY  P +++
Sbjct: 144 LADAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPQVVQWARDAGLAVSLDLIYGTPGESL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L+ ALSY  DH+S Y L +E GT      + G++    ++     Y L   + +
Sbjct: 204 EDWRYSLETALSYGPDHISAYALIVEDGTKLAAQIRRGEVPGIDDDDHAAKYELADELIT 263

Query: 245 AHGLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GL  YE+SN S    ++  HNL YWR  D+ GIGPGAHS V      V     KHP +
Sbjct: 264 AAGLGWYEVSNWSRTPEQACRHNLAYWRGDDWWGIGPGAHSHVG----GVRWWNVKHPTA 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +         +E L +E +  E +M+  RL  G+ V    + +GR    +    L 
Sbjct: 320 YAGRLAGGVSPAAGRETLDAETRNVERVMLEARLSTGLEVSGLGV-SGR----QAVAGLI 374

Query: 364 RQGFIERVQF--SRLRCTQRGMTMLDSVI 390
             G ++       RL  T +G  + D+V+
Sbjct: 375 ADGLVDPAAAFRGRLVLTLKGRLLADAVV 403


>gi|291007478|ref|ZP_06565451.1| coproporphyrinogen III oxidase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 378

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 190/387 (49%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-------- 72
           +YVH PFC  +C YCDFN++    ++G      S+L  ++    L G R ++        
Sbjct: 1   MYVHVPFCATRCGYCDFNTYTAD-ELGSSAGFGSWLEGLRAELDL-GARVLAAGGEPVPA 58

Query: 73  --SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             ++F GGGTPSL+  + +  +LD +  ++ ++   E+T E+NP S     F+G   AG 
Sbjct: 59  AGTVFAGGGTPSLLGAERLGEVLDAVRSSFGLADGAEVTTESNPESTSPEFFEGIAAAGY 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            R+SLG+QS  +  LR L R H    A+ A   AR   F  ++ DLIY  P +T      
Sbjct: 119 TRVSLGMQSAAQHVLRVLERRHTPGRAVEAAREARAAGFGHVNLDLIYGTPGETDDDLRA 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L   VDH+S Y L +E GT   +  + GDL +P E+V  D Y L   +    GLH
Sbjct: 179 SLDAVLEAGVDHVSAYSLIVEDGTAMARKVRRGDLPMPDEDVLADRYELLDGVLGGAGLH 238

Query: 250 AYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            YE+SN +    A  +HN+ YWR GD+ G GPGAHS V      V     KHP  +  ++
Sbjct: 239 WYEVSNWARDDAARCMHNIGYWRGGDWWGAGPGAHSHVG----GVRWWNVKHPARYSALL 294

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            +     + +E L +E Q  E +M+ LRL  G+ +   +  AGR       +     G +
Sbjct: 295 AEGASPALAREVLDAEDQRIERVMLELRLASGLPLAVLDE-AGRL----AAKEAVADGLL 349

Query: 369 ERVQFSRLRC--TQRGMTMLDSVIANL 393
                +  RC  T RG  + D VI  L
Sbjct: 350 RADALAADRCVLTDRGRLLADGVIQRL 376


>gi|46204805|ref|ZP_00049452.2| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Magnetospirillum magnetotacticum MS-1]
          Length = 438

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 174/349 (49%), Gaps = 21/349 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT-----G 67
           +   GVY+H PFC  +C YCDFN++      G   Q ++  + L E+    ++       
Sbjct: 32  TRGFGVYLHVPFCSVRCGYCDFNTYTASELGGGASQASYASTALREIDLAARVLHDAGLP 91

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R +S++F GGGTP+L+   ++  +L G+   W ++ + E+T EANP SV   +      
Sbjct: 92  ERPVSTVFVGGGTPTLLPAGDLVRLLGGVRDAWGLAPDAEVTTEANPDSVTPESLAELAA 151

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG  R+S G+QS     L  L R H+       +  AR+   ++S DLIY  P +++  W
Sbjct: 152 AGFTRVSFGMQSAVPHVLATLERTHDPRRIPDVVRWARDAGLQVSLDLIYGTPGESLDDW 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+ AL+  VDH+S Y L +E GT      +  ++ LPSE+     Y L   + +A G
Sbjct: 212 RASLEAALATGVDHVSAYALVVEAGTKMAAQVRRWEVALPSEDDQATKYELADELLTAAG 271

Query: 248 LHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVG----------SHRVAIS 296
           L  YE+SN +   A+   HNL YWR  D+ GIGPGAHS V               RV + 
Sbjct: 272 LTWYEVSNWARTEADRCRHNLAYWRGDDWWGIGPGAHSYVAATGAAPAGASPEDARVGVR 331

Query: 297 I--EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
               KHP  +  ++         +E L+  +   E  M+G+RLREG+ +
Sbjct: 332 WWNVKHPRRYAALLEAGTSPAAGRELLTRTEGRLEQAMLGVRLREGLDL 380


>gi|313813065|gb|EFS50779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL025PA1]
 gi|327330771|gb|EGE72517.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL097PA1]
          Length = 407

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDFN++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 34  IYLHVPFCASRCGYCDFNTYVLS-AMGDDAVAGYLDAAHQELELAADALGDAQPPVSTIF 92

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D +   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 93  FGGGTPTMLSPVQLGELIDHVRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 153 GMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRHSLDVT 212

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 213 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 272

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 273 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLGD 328

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 329 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 380

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 381 GTMEEGRLVLNLSGRMVADRIITDLLV 407


>gi|282919359|ref|ZP_06327094.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C427]
 gi|282317169|gb|EFB47543.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C427]
          Length = 385

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP++++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNKDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVSSRRFK 333


>gi|51244568|ref|YP_064452.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotalea
           psychrophila LSv54]
 gi|50875605|emb|CAG35445.1| related to oxygen-independent coproporphyrinogen III oxidase
           [Desulfotalea psychrophila LSv54]
          Length = 387

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 14/339 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSISSIFF 76
           +Y+H PFC  KC YC FNS+      GQ +    +I +   E+ ++    G R + ++FF
Sbjct: 16  LYLHIPFCRSKCRYCAFNSYS-----GQGHLFVRYIAALKRELSFLFSEYGGRPLDTVFF 70

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++    +  ILD   + W  S   EI+ EANP +V   +    R+ G NRIS G
Sbjct: 71  GGGTPTVLGAAGLVEILDHCQQLWGWSKQAEISTEANPETVSAADLILLRRGGFNRISFG 130

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQSL +  L  LGR H+A+ AI A+  AR   F  ++ DL+  L  Q++  W   L  AL
Sbjct: 131 VQSLSDHDLLSLGRAHSAARAIQALEDARQAGFDNINLDLMSGLHGQSLQDWRRVLTEAL 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   DHLS+YQLT E+GT +Y     G  ++P +++++ +  LT  +    GL  YE+SN
Sbjct: 191 TLKPDHLSVYQLTPEEGTPYYDDVMAGRALVPEDDLSLAMDALTWEMCRQAGLAQYEVSN 250

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G +  HN+NYW   D +  G GA   V     + A  +E  P  + + V      +
Sbjct: 251 YAQSGKKCRHNVNYWLNSDSLAAGAGA---VSFNGGQRARRLED-PAEYCQCVEAGHSPI 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           VE E L  E    E +++GLR+ EGI ++  +   G +L
Sbjct: 307 VESEELDREASFRETVIVGLRMIEGIEIQSLQDRYGIDL 345


>gi|290960531|ref|YP_003491713.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           scabiei 87.22]
 gi|260650057|emb|CBG73173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces scabiei 87.22]
          Length = 410

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  R
Sbjct: 22  LAGAAGRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTVVDEIRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PRS+ ++F GGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 82  KVLGDDPRSVRTVFVGGGTPTLLAADDLVRMLGAVRDEFGLADDAEVTTEANPESVDPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R  G NR+S G+QS  +  L+ L R H        +  AR   F  ++ DLIY  P
Sbjct: 142 LETLRAGGFNRVSFGMQSARQHVLKILDRTHTPGRPERCVAEARAAGFDHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 202 GESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 EMLSAAGFDWYEVSNWATSAAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           HP ++   +         +E LS E +  E +++ LRLREG  +
Sbjct: 318 HPGAYAGALAAGRSPGAGRELLSDEDRRVERILLELRLREGCPL 361


>gi|153814298|ref|ZP_01966966.1| hypothetical protein RUMTOR_00507 [Ruminococcus torques ATCC 27756]
 gi|317500016|ref|ZP_07958251.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|331087754|ref|ZP_08336680.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848694|gb|EDK25612.1| hypothetical protein RUMTOR_00507 [Ruminococcus torques ATCC 27756]
 gi|316898501|gb|EFV20537.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|330409735|gb|EGG89171.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 423

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 216/429 (50%), Gaps = 62/429 (14%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISS 73
             L +YVH PFCVKKC YCDF S    +   QE    ++++   E++  ++      +++
Sbjct: 3   KELELYVHIPFCVKKCAYCDFLS----FSAKQEEVSAYVEALAEEIKGKKEQFSDYCVTT 58

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPS++E    A I   + +++ ++ N EIT+E NP +V       ++  GVNR+
Sbjct: 59  IFLGGGTPSILEGVYTASIFRALRESFDIAENAEITMEVNPGTVSEEKINMWKTCGVNRL 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS+++  L+ LGR H   E +    + R   F  ++ DLI A+P QT   WE  L+
Sbjct: 119 SIGLQSVDDGELKMLGRIHTYDEFLTTWKMVRKAGFHNVNIDLISAIPGQTKKSWETTLR 178

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH------------------------KDGD----- 223
                  +H+S Y L IE+GT+F  ++                        KDG+     
Sbjct: 179 TVAQLQPEHISAYSLIIEEGTVFGTIYGEDGERICQKELLSRESSMPEVSDKDGNIRKDR 238

Query: 224 --LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
             L LP E+    +Y +T+ I   +G   YEISN++  G E  HNL YW   +Y+G+G G
Sbjct: 239 QILPLPDEDTERAIYEITEKILREYGYERYEISNYAKPGYECRHNLGYWERREYLGLGLG 298

Query: 282 AHSRVKVGSHR--------VAISIEK--HPESWLKMVRKNGHAVVEK----EFLSSEQQA 327
           A S   +  HR        V I + K   P+   +  +K   AV EK      LS ++Q 
Sbjct: 299 ASSL--IAEHRFCNTDKMDVYIRLNKTVDPDGKKEESKK---AVWEKAEEVSVLSVQEQM 353

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMT 384
           +EF+ +GLR  +G+S K +    G  +D    E    L+++  + + +  ++R T+RG+ 
Sbjct: 354 EEFMFLGLRKTDGVSEKSFFETFGVQIDTVYGETIGKLEKERLLIKEK-GQIRLTERGVD 412

Query: 385 MLDSVIANL 393
           + + V++  
Sbjct: 413 ISNYVMSEF 421


>gi|295838954|ref|ZP_06825887.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           SPB74]
 gi|197695509|gb|EDY42442.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           SPB74]
          Length = 413

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 174/345 (50%), Gaps = 15/345 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 25  LDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 85  EVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+ G NRIS G+QS     LR L RNH      A +  AR   F  ++ DLIY  P
Sbjct: 145 LETLREGGFNRISFGMQSARPHVLRVLDRNHTPGRPEACVAEARAAGFEHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 205 GESDADWRASLEAAIGAGPDHVSAYALIVEEGTGLARRVRRGEIPMTDDDEHADRYLIAD 264

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 ELLAKAGFDWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           HP ++   + +       +E L  E +  E +++ LRLREG  + 
Sbjct: 321 HPGAYAAALAEGRSPGAGRELLGEEDRRVEHILLELRLREGCPLD 365


>gi|254422388|ref|ZP_05036106.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. PCC 7335]
 gi|196189877|gb|EDX84841.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. PCC 7335]
          Length = 419

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 188/355 (52%), Gaps = 23/355 (6%)

Query: 22  YVHWPFCVKKCPYCDFN-SHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSISSIF 75
           Y+H PFC ++C YCDF  + +   K G  +     + ++ L E+     +   R + ++F
Sbjct: 6   YIHIPFCRRRCFYCDFAITVIGEKKRGDTSNTMATYTRTLLKEIA-ATPIYDKRPLKTVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+    +  IL  IA  + ++ N EIT+E +P++ ++++ +GY+ AGVNR+SL
Sbjct: 65  FGGGTPSLLSVTQVEEILAAIAHRFGIAPNAEITMEMDPATFDLDHIRGYKSAGVNRVSL 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L   GR H   +   A+ L R       S DLI  LP Q M  W+  L  A
Sbjct: 125 GVQAFKDELLAAAGRFHRREDIFHAVELLRQAGIENFSLDLILGLPYQVMKDWQAALIEA 184

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    HLS+Y L +E  T F + +  G   LPS+++ V++Y + +S+ SA+G   YEI 
Sbjct: 185 ITLGPKHLSIYDLIVEPQTAFSRYYISGQAPLPSDHLTVEMYRVARSVLSANGYEHYEIC 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEKHPESWLKMVRKN 311
           N++     S HNL YWR     G G GA S +   ++   R     ++  + W+    +N
Sbjct: 245 NYAKPSYASQHNLTYWRCQQNYGFGMGATSYLNHQRIDRPRT----QQRYQVWVDAFIQN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           G    +   +  E+Q  E +MMGLRL  GI++     + G       E+ LQ  G
Sbjct: 301 GGRTADP-VIDPEEQVVESIMMGLRLPAGIALGGVHQIYG-------EKGLQALG 347


>gi|294812565|ref|ZP_06771208.1| Coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|326440982|ref|ZP_08215716.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294325164|gb|EFG06807.1| Coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 410

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     L  Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 22  LDGAADRPLAFYLHVPYCATRCGYCDFNTYTASELRGSGGVLASRDNYAATVAEEVRHAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            + G  PR + ++F GGGTP+L+  +++  +++ + K + ++ + EIT EANP SV    
Sbjct: 82  TVLGDDPRPVRTVFVGGGTPTLLPARDLVAMVETVRKEFGLAEDAEITTEANPESVGPEY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R  G NRIS G+QS     L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 142 LEELRAGGFNRISFGMQSARRHVLKVLDRTHTPGRPEACVAEARAAGFGHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 202 GESDEDWRASLTAAVGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           S+ +  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 SVLAEAGYSWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E LS E +  E +++ LRL +G+ +    +L  R   +E  
Sbjct: 318 HPGAYAAALAEGRSPGAGRELLSDEDRRVERVLLELRLVDGVPLS---LL--RPAGLEAA 372

Query: 360 RNLQRQGFIERVQFS--RLRCTQRGMTMLDSVIANL 393
           R     G +E   +   R   T RG  + D+V+ +L
Sbjct: 373 RRALADGLLEASAYDGGRAVLTLRGRLLADAVVRDL 408


>gi|226360384|ref|YP_002778162.1| coproporphyrinogen III oxidase [Rhodococcus opacus B4]
 gi|226238869|dbj|BAH49217.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodococcus opacus B4]
          Length = 402

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 189/384 (49%), Gaps = 14/384 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTG 67
           + G GS   G+YVH PFC  +C YCDFN+++          +++++    E+    Q+TG
Sbjct: 24  LAGVGSRPFGIYVHVPFCATRCGYCDFNTYMAGELGTSASPQSWMEGLRRELDLAAQMTG 83

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             ++ ++F GGGTPSL+    +A +L  +  ++ +S   E+T E+NP S     F+    
Sbjct: 84  APAVDTVFVGGGTPSLLGGDGLADVLGAVRSSFGLSDGAEVTTESNPESTSPEFFERLLA 143

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  RISLG+QS  +  L+ L R H    A+AA   AR   F  ++ DLIY  P +    
Sbjct: 144 GGFTRISLGMQSAAQHVLKVLDRTHTPGRAVAAALEARAAGFGHVNLDLIYGTPGERDED 203

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            ++ L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    +  +  
Sbjct: 204 LDLSLDAVLSAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDARLAEA 263

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YE+SN +  GA   HNL YW  GD+ G GPGAHS V      V     KHP  +  
Sbjct: 264 GLTWYEVSNWAREGAACRHNLGYWDGGDWWGAGPGAHSHVG----GVRWWNVKHPARYAD 319

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +      V   E L+ E    E +M+  RLR G+ V + +     +++      +   G
Sbjct: 320 QLAAGSLPVGGSEQLTGEDVHVERVMLTARLRTGLPVAELD-----DVEKSAAEAVIADG 374

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            + R     L  T+RG  + D+V+
Sbjct: 375 LLVRAG-EHLVLTERGRLLADAVV 397


>gi|170782116|ref|YP_001710449.1| coproporphyrinogen III oxidase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156685|emb|CAQ01844.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clavibacter michiganensis subsp. sepedonicus]
          Length = 407

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 193/393 (49%), Gaps = 24/393 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQW----MRQLT 66
           G  + + GVY+H PFC  +C YCDFN++       V Q ++    + E+++    +R+  
Sbjct: 24  GADARAFGVYLHVPFCRVRCGYCDFNTYTAPELRGVKQSDYASQAVQEVRFAGSALRESG 83

Query: 67  GP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            P R  S++F GGGTP+L+  +++  +LD +   W ++   E+T EANP SV+       
Sbjct: 84  VPARPASTVFLGGGTPTLLPVEDLVRMLDAVRDTWGIAEGAEVTTEANPDSVDDAYLAAL 143

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G  R+S G+QS   + L  L R H+ +     +  AR     +S DLIY  P +T+ 
Sbjct: 144 AAGGFTRVSFGMQSAVPRVLATLERTHDPARIAPVVRGARAAGLEVSLDLIYGTPGETID 203

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   L++A++   DHLS Y L +E GT   +  + G++  P E++  D+Y L   +   
Sbjct: 204 DWRASLEQAIAQEPDHLSAYALIVEPGTKLARQIRRGEVPEPDEDLQADMYELADRMLGE 263

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G  S HNL YW+  D+ G+GPGAHS V      V     KHP +  
Sbjct: 264 AGYEWYEVSNWARDGRRSRHNLAYWQGHDWWGVGPGAHSHVG----GVRWWNVKHPAAHA 319

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NL 362
             V         +E L    +  E +++G R+R+G+++          L  E  R    L
Sbjct: 320 DRVLAGASPGAGRESLDDATREVERVLLGARIRDGLAIP--------TLTAEGRRQVAGL 371

Query: 363 QRQGFIE-RVQFS-RLRCTQRGMTMLDSVIANL 393
              G +E R   S  L  T +G  + DSV+  L
Sbjct: 372 IADGLVEPRAALSGTLVLTLQGRLLADSVVRRL 404


>gi|325978675|ref|YP_004288391.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178603|emb|CBZ48647.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 403

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 208/378 (55%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++Q+ + E +        + + +++ GGGTP
Sbjct: 36  YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLQALIREFESY----DIKQLRTLYIGGGTP 90

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SLGVQ+  
Sbjct: 91  TSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSLGVQTFN 150

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++  + I HL    F  +S DLIYALP QTM   +  + +A++  + 
Sbjct: 151 DKQLKRIGRSHNEAQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKAIALDIP 210

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEISN +  G
Sbjct: 211 HLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEISNFTKPG 270

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E 
Sbjct: 271 FESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNARLSEEV 325

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER------NLQRQGFI---ERV 371
           L+ ++  +E L +GLR + G+S+  +E   G + +   ER       L +QG +   ++V
Sbjct: 326 LTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFE---ERYGQIVIELCQQGLLVPDDKV 382

Query: 372 QFSRLRCTQRGMTMLDSV 389
               +R T++G+ + D+V
Sbjct: 383 ----VRMTKKGLFLGDTV 396


>gi|150015713|ref|YP_001307967.1| coproporphyrinogen III oxidase [Clostridium beijerinckii NCIMB
           8052]
 gi|149902178|gb|ABR33011.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium beijerinckii NCIMB 8052]
          Length = 375

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/333 (34%), Positives = 186/333 (55%), Gaps = 14/333 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            + +Y+H PFC +KC YCDF S+      G+E  +  ++  +   + Q      ISSIF 
Sbjct: 3   DISLYIHIPFCKQKCFYCDFPSYS-----GKEGLMNEYIEALSNEILQKGKEYRISSIFI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +   ++  +L G      +  ++E T+E NP ++   N    ++  VNRIS+G
Sbjct: 58  GGGTPSYLNDLSLEKLL-GTLNKLNLKDDLEFTVECNPGTLNEKNLNIMKEHNVNRISMG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ +GR H+  E      LAR + F  ++ DL++ LP QT+  WE  L++A 
Sbjct: 117 LQSTKNSLLKDIGRIHSYEEFEENYFLARKLGFNNINVDLMFGLPNQTIEDWECSLRKAA 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +DH+S Y L IE+GT FY ++++  L LP E+    +Y  T+ I + +G H YEISN
Sbjct: 177 ELELDHISAYSLIIEEGTRFYNLYEEDKLNLPEEDKERIMYLTTKDILNGYGYHQYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +S    E  HN  YW+  +Y+G+G  A S +     +   +I++    ++K +  N  +V
Sbjct: 237 YSKKSKECFHNKVYWKCDEYLGMGVSASSFIDKKRSKNIDNIKE----YIKRIN-NKESV 291

Query: 316 VEKEFLSS-EQQADEFLMMGLRLREGISVKDWE 347
           +E+  L+  +   +EFL MGLR+ EGI V+ ++
Sbjct: 292 IEEIHLNDIKDDMEEFLFMGLRMIEGIKVEKFK 324


>gi|283470862|emb|CAQ50073.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus ST398]
          Length = 374

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 176/327 (53%), Gaps = 12/327 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E + EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSIDQLERLLKAIRDTFTITG--EYSFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIISISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALEG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWE 347
            S  ++ +E + +GLRL EG+S + ++
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVSSRRFK 322


>gi|239979389|ref|ZP_04701913.1| coproporphyrinogen III oxidase [Streptomyces albus J1074]
 gi|291451264|ref|ZP_06590654.1| coproporphyrinogen III oxidase [Streptomyces albus J1074]
 gi|291354213|gb|EFE81115.1| coproporphyrinogen III oxidase [Streptomyces albus J1074]
          Length = 413

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 195/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVG----QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++     R   G    ++N+  +   E++  R
Sbjct: 25  LDGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRSSGGVLASRDNYADTLADEVRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+  +++  +LD +   + ++ + EIT EANP SV+   
Sbjct: 85  KVLGDDPREVRTVFVGGGTPTLLAARDLVRMLDAVRSEFGLAPDAEITTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LAELREGGFNRISFGMQSARQHVLKVLDRRHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++    ++   D Y +  
Sbjct: 205 GESDDDWRASLSAAVGAGPDHVSAYALIVEEGTGLARRIRRGEVAPTDDDEHADRYLIAD 264

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           ++ +  G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 TMLAEAGYHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +  +      +E L+ E +  E +++ LRL +G  +    +L    L     
Sbjct: 321 HPGAYAAALADSRSPGAGRELLTPEDRRVERILLELRLADGCPLA---LLNPAGL--AAA 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G +    F+  R   T RG  + D+V+ +L
Sbjct: 376 RQALTDGLLAETPFAEGRAVLTLRGRLLADAVVRDL 411


>gi|167759410|ref|ZP_02431537.1| hypothetical protein CLOSCI_01757 [Clostridium scindens ATCC 35704]
 gi|167662967|gb|EDS07097.1| hypothetical protein CLOSCI_01757 [Clostridium scindens ATCC 35704]
          Length = 363

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 202/381 (53%), Gaps = 29/381 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC+ KC YCDF S   + +  ++ +++S    ++    L     + SIF GG
Sbjct: 4   LELYIHIPFCISKCKYCDFLSAPSK-EGERQKYVKSLCKRIRSYGTLAEAYHVVSIFIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  I+ I   + + + V  + EITIE NP +V       YR+AG++R+S+G+Q
Sbjct: 63  GTPSLLDPVQISAIFHAVRETFMVDKDAEITIEMNPGTVSPEKLIAYRQAGISRLSIGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+  + L  LGR H   E +    +AR   F  ++ DL+  +P QT+  W+  L+R    
Sbjct: 123 SIRNEELEVLGRIHTFEEFLHTYEMARREGFGNINIDLMSGIPFQTLNGWKESLKRVADL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG--DLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +H+S Y L IE+GT FY+ ++D   +  LP E     +Y+ T+ I  A+G   YEISN
Sbjct: 183 EPEHISAYSLIIEEGTPFYERYRDARHEEELPDEETERQMYHHTREILGAYGYRRYEISN 242

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   +Y+GIG GA S   +G+ R           W       G   
Sbjct: 243 YAKEGYECRHNLGYWNRTEYLGIGTGAAS--LIGNRR-----------W-----SEGE-- 282

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQ 372
            E E LS E Q +E++ +GLR  EG++  ++    G  ++ +    L+R   +G +E   
Sbjct: 283 -EPEALSRENQMEEYMFLGLRKMEGVTKSEFLKEFGCTMESKYSHVLKRMYAEGLMEESG 341

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              +R T +G+ + + V++  
Sbjct: 342 -DYVRLTDQGIDISNYVMSEF 361


>gi|254392599|ref|ZP_05007776.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197706263|gb|EDY52075.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 416

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     L  Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 28  LDGAADRPLAFYLHVPYCATRCGYCDFNTYTASELRGSGGVLASRDNYAATVAEEVRHAR 87

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            + G  PR + ++F GGGTP+L+  +++  +++ + K + ++ + EIT EANP SV    
Sbjct: 88  TVLGDDPRPVRTVFVGGGTPTLLPARDLVAMVETVRKEFGLAEDAEITTEANPESVGPEY 147

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R  G NRIS G+QS     L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 148 LEELRAGGFNRISFGMQSARRHVLKVLDRTHTPGRPEACVAEARAAGFGHVNLDLIYGTP 207

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 208 GESDEDWRASLTAAVGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 267

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           S+ +  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 268 SVLAEAGYSWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 323

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E LS E +  E +++ LRL +G+ +    +L  R   +E  
Sbjct: 324 HPGAYAAALAEGRSPGAGRELLSDEDRRVERVLLELRLVDGVPLS---LL--RPAGLEAA 378

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R     G +E   +   R   T RG  + D+V+ +L
Sbjct: 379 RRALADGLLEASAYDGGRAVLTLRGRLLADAVVRDL 414


>gi|300813568|ref|ZP_07093899.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512316|gb|EFK39485.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 379

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 189/373 (50%), Gaps = 11/373 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + +Y+H PFC  +C YCDF S V   K   E +I+    E+   + +   R IS+IF 
Sbjct: 4   NKISIYIHIPFCRSRCHYCDFCSSVIDEK-QVEKYIKYLKKEIHLYKDILEGREISTIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+   I  IL+   KN+  S ++EITIEANP+S+ +   + YR   +NRIS+G
Sbjct: 63  GGGTPSSIDEIFIGQILEEF-KNFNFSKDIEITIEANPNSLSLEKLKKYRNFNINRISIG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS   + L+ +GR HN  E    +   +   F   + DL+ ALP QT+   E  ++   
Sbjct: 122 AQSFNNKILKTIGRIHNKEEIFKTVEKIKEAGFINFNIDLMLALPYQTLKDIEESVEILK 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L IE  T   K++     + PSEN+   +Y+         G + YEISN
Sbjct: 182 ILNPNHISYYSLIIEDNTNIKKLYDKNSSLFPSENMDRKMYHYLVDNLEKIGYNQYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +    E  HNL+YW   DY+G G  A S ++        S      S+ K + K    +
Sbjct: 242 FAKKSFECKHNLSYWTLKDYLGFGLSASSNLRDKRFTNTCSF----SSYYKSLDKEKKPI 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
              E LS + + +EF +MG+RL  GI  K++E +   N     E+ +    + G IE V+
Sbjct: 298 DFSEILSKKDRMNEFSIMGIRLNSGIDTKNFEEIFSTNFFKYYEKEIYKHIKDGLIE-VK 356

Query: 373 FSRLRCTQRGMTM 385
             ++  +++G  +
Sbjct: 357 EDKICLSKKGRDL 369


>gi|293368829|ref|ZP_06615433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
 gi|292636134|gb|EFF54622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
          Length = 376

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 198/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKPRYVQALCRELTMRKEYLKGEDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I +++ ++   EIT+EANP  +     +       NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGISYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEYN-GA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|311741355|ref|ZP_07715179.1| coproporphyrinogen dehydrogenase [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311303525|gb|EFQ79604.1| coproporphyrinogen dehydrogenase [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 379

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 189/387 (48%), Gaps = 20/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SIS 72
           +   G+Y+H PFC  +C YCDFN++         +    +L  +    +L   R      
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDRELELAAARVGRPAE 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+  Q ++ IL+ +   + +    E+T E+NP S     F     AG  R
Sbjct: 62  TVFIGGGTPSLLGGQGLSRILNTVRSTFGLKPGAEVTTESNPESTSPEYFSQLADAGYTR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLG+QS     L+ L R H    A AA   AR   F  ++ D+IY  P +T       L
Sbjct: 122 ISLGMQSASPGVLQVLERAHTPGRAFAAAREARAAGFEHVNLDMIYGTPTETDDNVRETL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   A G   Y
Sbjct: 182 DRVLETGVDHVSAYSLIVEDGTRMARKVNKGILPAPDEDVLARRYEMISSTLEAEGFEWY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN S  G E  HN  YW  G++ G GPGAHS   +G+ R   ++ KHP  ++  + ++
Sbjct: 242 EVSNWSKPGGECEHNRIYWVDGNWWGAGPGAHSH--LGNERF-FNV-KHPSRYIDALGRD 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFI 368
              + E E L+   +  E +M+GLRLREGI  + W       LD      L+R   +G +
Sbjct: 298 ELPIKETETLTDADRHMEKIMLGLRLREGIP-EAW-------LDAHAAPALERFIGRGLL 349

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ER    R+R T+ G  + D +I +L V
Sbjct: 350 ERAD-DRVRITKPGRLLADGIITDLLV 375


>gi|146296756|ref|YP_001180527.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410332|gb|ABP67336.1| coproporphyrinogen III oxidase, anaerobic [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 376

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 197/384 (51%), Gaps = 30/384 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-----ISS 73
           +G+Y+H PFC KKC YCDF S    Y+  +   +  +   +Q  R+L   +      I +
Sbjct: 5   IGLYIHIPFCKKKCLYCDFVS----YESVENGLVSEYFDSLQ--RELIFYKENYDIEIET 58

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS ++ + I  ++  I  N+ V  N E TIEANP S+     + Y+   +NR+
Sbjct: 59  IYIGGGTPSAVDTKYIERLIGFIYSNFKVDENCETTIEANPESLNKEKLKVYKLLNINRL 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QSL +  L+ LGR H +  A+  + LA   F   + DL+  LP Q +  +   L+ 
Sbjct: 119 SIGIQSLNDIELKALGRIHTSKRALEILELAARYFENFNIDLMIGLPYQNIESFSKTLET 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+S+   H+S+Y L IE+GT FY  ++      P E     +Y L        G++ YEI
Sbjct: 179 AISFGPPHVSVYSLKIEEGTYFYDAYEFLKSYFPPEKEERSMYWLAVERLYDFGIYQYEI 238

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +    E  HNL YW    YIGIG  +HS  +   +     I+++  S      KNG+
Sbjct: 239 SNFARKKFECKHNLKYWDCESYIGIGSSSHSFFEGYRYSNVSDIKEYINSI-----KNGY 293

Query: 314 -AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
            AV  KE++  E+   E++++GLR  EGI +   E    R  +I+  +  + Q  IE+++
Sbjct: 294 LAVDTKEYIDDEEMEKEYIILGLRKIEGIDLLKLE----RRFNIDFMKKYKTQ--IEKLR 347

Query: 373 F-------SRLRCTQRGMTMLDSV 389
                   S  R T++GM   + V
Sbjct: 348 KYGLVEINSHFRLTKKGMDFANIV 371


>gi|297160564|gb|ADI10276.1| coproporphyrinogen III oxidase [Streptomyces bingchenggensis BCW-1]
          Length = 410

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 178/345 (51%), Gaps = 15/345 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G  +  LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  R
Sbjct: 22  VAGAANRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYADMVVEEVRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++   E+T EANP SV+   
Sbjct: 82  KVLGDDPRPVETVFVGGGTPTLLAAADLGRMLGAIRDEFGLAEGAEVTTEANPESVDPRY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R AG NR+S G+QS  +  LR L R H      A +  AR   F  ++ DLIY  P
Sbjct: 142 LEQLRAAGFNRVSFGMQSARQHVLRVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 202 GESDEDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + SA G   YE+SN +   A    HN  YWR  D+ G GPGAHS V      V     K
Sbjct: 262 EMLSAAGFRWYEVSNWATSDAGRCRHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           HP ++ + + +       +E L+ E++  E +++ LRL EG  + 
Sbjct: 318 HPGAYAQALSEGRSPGAGREVLTGEERRVERILLELRLAEGCPLD 362


>gi|297243454|ref|ZP_06927386.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis AMD]
 gi|296888499|gb|EFH27239.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis AMD]
          Length = 440

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 173/350 (49%), Gaps = 27/350 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VYVH PFC+++C YCDFN++  R       +E +    + EMQ +++      I      
Sbjct: 23  VYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIREMQLVKKWQEYHGIFESKAQ 82

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+FFGGGTP++++ +++  IL  I   W + +  EIT EANP + +    +   + G  R
Sbjct: 83  SVFFGGGTPTVLKARDLVRILQEIRNLWGLKTGAEITTEANPDTADEKYIETLAEGGFTR 142

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H        ++ A     R S DLIY  P +++  W   ++
Sbjct: 143 ISFGMQSAVPHVLKTLDRTHTPENVTRGVNAANACGLRSSVDLIYGAPGESLDDWRKSVE 202

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ALS  V+H+S Y LT+E  T   +    G +  P+++     Y L   + ++ GL  YE
Sbjct: 203 MALSLGVNHISAYALTVEPRTKMGRQIAAGTIQAPNDDDEAAKYELADELFNSAGLQWYE 262

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK------------- 299
           ISN +  G ES HNL YWR  D+ GIGPGAHS     +H    S++              
Sbjct: 263 ISNWAHPGFESRHNLGYWRNIDWAGIGPGAHSHYNAANHISKQSMDDEASLADSNEFYNL 322

Query: 300 ------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 HP+ W   +          E +++E    E +M+GLR++EG+ +
Sbjct: 323 RAWDILHPKRWAHAINLGNVPWQNYECINAEDALIEEVMLGLRIKEGLDI 372


>gi|145628838|ref|ZP_01784638.1| coproporphyrinogen III oxidase [Haemophilus influenzae 22.1-21]
 gi|144979308|gb|EDJ88994.1| coproporphyrinogen III oxidase [Haemophilus influenzae 22.1-21]
          Length = 333

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/296 (37%), Positives = 171/296 (57%), Gaps = 13/296 (4%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           MQ  +     R + SIF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE
Sbjct: 1   MQRFKDAIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVE 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
              F+GY  AG+ RIS+G+QS  +  L+ LGR HNA+EA +A++LA+ +     + DL++
Sbjct: 61  AERFKGYVSAGITRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMH 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLY 236
            LP QT+ +   +L++A+  +  H+S YQLTIE  T+F Y+  K     LP ++   D++
Sbjct: 121 GLPNQTLEEALDDLRQAIELSPPHISWYQLTIEPNTMFAYRPPK-----LPDDDALWDIF 175

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-I 295
                + +A G   YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   
Sbjct: 176 EQGHQLLTAAGYQQYETSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRF 235

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           S  KHP+ +L+     G  + E++ +S   +  EF M   RL E +  +++E   G
Sbjct: 236 SKTKHPKGYLR-----GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTG 286


>gi|212691062|ref|ZP_03299190.1| hypothetical protein BACDOR_00552 [Bacteroides dorei DSM 17855]
 gi|212666294|gb|EEB26866.1| hypothetical protein BACDOR_00552 [Bacteroides dorei DSM 17855]
          Length = 376

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 201/380 (52%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R  K  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTR--KEQKTAYIRALCHELTNRKDYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A    R   F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEISNHS 257
            +H+S Y L  E+GT  +K+ +   +    E+++V L+  L   +T+A G   YEISN  
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTA-GYEHYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E
Sbjct: 240 LPGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQF 373
            E L    + ++F++  +R + G+ +       G  L   C R    +LQ QG +E ++ 
Sbjct: 295 VEELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLRMATPHLQ-QGTLE-IKN 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L+ T++G+ + D +++++
Sbjct: 353 DTLKLTRKGVFISDGIMSDM 372


>gi|238754616|ref|ZP_04615970.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia ruckeri ATCC 29473]
 gi|238707247|gb|EEP99610.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia ruckeri ATCC 29473]
          Length = 347

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 173/311 (55%), Gaps = 17/311 (5%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           V  + ++   L ++     LT  R+IS+IF GGGTPSL+  + +  +LDG+     V+++
Sbjct: 5   VPHQEYVDHLLADLDADLPLTSGRAISTIFIGGGTPSLLSAEAMQSLLDGVRARLPVAAD 64

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            EIT+EANP +VE + F GY++AGVNRIS+GVQS  EQ L  LGR H   EA  A  LA 
Sbjct: 65  AEITMEANPGTVEADRFSGYQRAGVNRISIGVQSFSEQKLVRLGRIHGPEEAKRAAALAT 124

Query: 166 NIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +  R  + DL++ LP QT+ +   +L++A++    HLS YQLTIE  T F         
Sbjct: 125 GLDLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLTIEPNTGFSSRPPK--- 181

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            LP ++   D++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH 
Sbjct: 182 -LPDDDALWDIFEQGHQLLSAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHG 240

Query: 285 RVKVGSHRVAISIE-KHPESWLK---MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           ++     R+  +++ KHP  +++   M +++   V ++ F        EF M   RL E 
Sbjct: 241 KLTFSDGRILRTVKTKHPRGFMQGNYMDKQHEVEVADRPF--------EFFMNRFRLLEA 292

Query: 341 ISVKDWEMLAG 351
               D+    G
Sbjct: 293 APRGDFFNFTG 303


>gi|152967355|ref|YP_001363139.1| coproporphyrinogen III oxidase [Kineococcus radiotolerans SRS30216]
 gi|151361872|gb|ABS04875.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Kineococcus radiotolerans SRS30216]
          Length = 401

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 186/389 (47%), Gaps = 17/389 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG 67
           + G    S GVY+H PFC  +C YCDFN++      G   Q  + Q+   E+    ++ G
Sbjct: 22  LAGAAQRSFGVYLHVPFCAVRCGYCDFNTYTATELGGGGSQAAYAQTAAREVTLAAEVLG 81

Query: 68  --PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R   ++FFGGGTP+L+   ++A +L  + ++  ++   E+T EANP SV        
Sbjct: 82  DAARPAQTVFFGGGTPTLLPAADLASMLRAVREDLGIAPGAEVTTEANPDSVTPEGLAQL 141

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            +AG  R+S G+QS     L  L R H+ +   +A+  AR     +S DLIY  P ++  
Sbjct: 142 AEAGFTRVSFGMQSAVPHVLAVLERTHDPARVPSAVRWAREAGLEVSLDLIYGTPGESHD 201

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                L  AL+   DH+S Y L +E+GT      + G++  PS++   D Y +     +A
Sbjct: 202 DLRASLDAALACEPDHVSAYALIVEQGTKLAGQMRRGEVPEPSDDDEADKYEIVDDTLTA 261

Query: 246 HGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            G   YE+SN +   G    HNL YWR GD+ GIGPGAHS V      V     KHP ++
Sbjct: 262 AGFSWYEVSNWAREPGNACEHNLAYWRGGDWWGIGPGAHSHVG----GVRWWNVKHPTAY 317

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              + +       +E L ++ +  E +++  RL EG     W +             L  
Sbjct: 318 AGRLGRGESPAHAREVLGADDRRVEDVLLRSRLAEGFDPAWWGVR-------PQTAQLLL 370

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G +E     R+  T+RG  + D+V+  L
Sbjct: 371 DGLLEPAPQGRVALTRRGRLLADAVVRRL 399


>gi|295130473|ref|YP_003581136.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK137]
 gi|291376268|gb|ADE00123.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK137]
          Length = 393

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDF+++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 20  IYLHVPFCASRCGYCDFSTYVLS-AMGDDAVAGYLDAAHQELELAADALGDAQPPVSTIF 78

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 79  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 139 GMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRHSLDVT 198

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 199 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 258

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 259 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLGD 314

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 315 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 366

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 367 GTMEEGRLVLNLSGRMVADRIITDLLV 393


>gi|237726628|ref|ZP_04557109.1| coproporphyrinogen III oxidase [Bacteroides sp. D4]
 gi|229435154|gb|EEO45231.1| coproporphyrinogen III oxidase [Bacteroides dorei 5_1_36/D4]
          Length = 376

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 201/380 (52%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R  K  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTR--KEQKTAYIRALCHELTDRKNYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A    R   F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEISNHS 257
            +H+S Y L  E+GT  +K+ +   +    E+++V L+  L   +T+A G   YEISN  
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTA-GYEHYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E
Sbjct: 240 LPGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQF 373
            E L    + ++F++  +R + G+ +       G  L   C R    +LQ QG +E ++ 
Sbjct: 295 VEELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLRMATPHLQ-QGTLE-IKN 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L+ T++G+ + D +++++
Sbjct: 353 DTLKLTRKGVFISDGIMSDM 372


>gi|182626898|ref|ZP_02954632.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens D str. JGS1721]
 gi|177907748|gb|EDT70360.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens D str. JGS1721]
          Length = 377

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 189/340 (55%), Gaps = 7/340 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + ++ +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHL-RKAYIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ +VE ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAK-LNMAKDVEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+ + F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    E  HNL YW   ++IG+G  A S +     +   S+E++  S    + +   AV
Sbjct: 240 YAKERKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEEYINS----INEKREAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            E    S     +EF+ MGLR   GI   +++     N++
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKKRFSMNIN 335


>gi|309388917|gb|ADO76797.1| oxygen-independent coproporphyrinogen III oxidase [Halanaerobium
           praevalens DSM 2228]
          Length = 407

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/263 (39%), Positives = 150/263 (57%), Gaps = 1/263 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KCPYCDF S V+  K G   +  +   E++ +   T  + + +I+FGGG
Sbjct: 11  AIYLHLPFCSSKCPYCDFYS-VQYTKKGVGQYWAALFMELEDLAAKTENKLVKTIYFGGG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSLIEP  I  I+  I   + V+   EIT+E NP+SV       +++AG+NR+S+G+QS
Sbjct: 70  TPSLIEPNLIKDIIKKIKNKFKVTPTAEITMEINPASVSEEKIINFKRAGINRLSIGIQS 129

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              Q L FLGR  N+ +    + L  N F   S DLI+ALP Q++  +E +L+  L +  
Sbjct: 130 FNNQHLSFLGRKTNSLQNKKILKLVANNFKNYSVDLIFALPDQSLEDFEKDLKELLDFFP 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L I + T FY+ +  G L LP+E +   +Y L  +     G   YEISN S  
Sbjct: 190 PHISLYNLEIHENTPFYQKYNQGKLKLPTEELDAQMYKLALNKLKQAGYQHYEISNFSQK 249

Query: 260 GAESLHNLNYWRYGDYIGIGPGA 282
           G  + HN  YW Y  Y+ +GPGA
Sbjct: 250 GYRAQHNYIYWLYQPYLALGPGA 272


>gi|289434758|ref|YP_003464630.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289171002|emb|CBH27544.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 384

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 184/351 (52%), Gaps = 10/351 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
           N+  VY+H PFC   C YCDFN   + +  GQ  + ++   + EMQ          I ++
Sbjct: 9   NTSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEMQITAANKQMEPIDTV 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I + + +   VE + EANP  + V   Q  +  GVNRIS
Sbjct: 66  FVGGGTPTTLNEAQIAKLCTAIQEIFPMKEEVEFSFEANPGDLSVAKVQTMKDYGVNRIS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS     L+ +GR H   +   ++   R + F  +S DLI++LP QT   ++  L +
Sbjct: 126 MGVQSFNNDLLKKIGRIHTVKDVYQSVENMRTVGFENVSIDLIFSLPGQTEADFQDTLNQ 185

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + H S Y L IE  T+FY + + G L LP ++   ++Y+L       HG   YEI
Sbjct: 186 ALALDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLVEMEKHGRKQYEI 245

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HN+ YW    Y G G GAH  +    +     I+K    +++ +++N  
Sbjct: 246 SNFAKEGFESKHNITYWSNEHYYGFGAGAHGYIGNTRYSNFGPIKK----YMEPLQENKL 301

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            V +++ L+ +++ +E + +GLR   G+S   ++   G++LD   +  +Q+
Sbjct: 302 PVFQQKELTLKEKMEEEMFLGLRKVSGVSKARFQRKFGQDLDATFQNAIQK 352


>gi|313637790|gb|EFS03140.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria seeligeri FSL S4-171]
          Length = 384

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 184/351 (52%), Gaps = 10/351 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
           N+  VY+H PFC   C YCDFN   + +  GQ  + ++   + EMQ          I ++
Sbjct: 9   NTSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEMQITAANKQMEPIDTV 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I + + +   VE + EANP  + V   Q  +  GVNRIS
Sbjct: 66  FVGGGTPTTLNEAQIAKLCTAIQEIFPMKEEVEFSFEANPGDLSVAKVQTMKDYGVNRIS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS     L+ +GR H   +   ++   R + F  +S DLI++LP QT   ++  L +
Sbjct: 126 MGVQSFNNDLLKKIGRIHTVKDVYQSVENMRTVGFENVSIDLIFSLPGQTEADFQDTLNQ 185

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + H S Y L IE  T+FY + + G L LP ++   ++Y+L       HG   YEI
Sbjct: 186 ALALDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLVEMEKHGRKQYEI 245

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HN+ YW    Y G G GAH  +    +     I+K    +++ +++N  
Sbjct: 246 SNFAKEGFESKHNITYWSNEHYYGFGAGAHGYIGNTRYSNFGPIKK----YMEPLQENKL 301

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            V +++ L+ +++ +E + +GLR   G+S   ++   G++LD   +  +Q+
Sbjct: 302 PVFQQKELTLKEKMEEEMFLGLRKVSGVSKARFQRKFGQDLDATFQNAIQK 352


>gi|313772380|gb|EFS38346.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL074PA1]
 gi|313809899|gb|EFS47620.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL083PA1]
 gi|313830229|gb|EFS67943.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL007PA1]
 gi|313834030|gb|EFS71744.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL056PA1]
 gi|314973236|gb|EFT17332.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL053PA1]
 gi|314975911|gb|EFT20006.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL045PA1]
 gi|314984072|gb|EFT28164.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA1]
 gi|315080773|gb|EFT52749.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL078PA1]
 gi|315096147|gb|EFT68123.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL038PA1]
 gi|327326065|gb|EGE67855.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL096PA2]
 gi|327446053|gb|EGE92707.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL043PA2]
 gi|327447967|gb|EGE94621.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL043PA1]
 gi|328760434|gb|EGF74002.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL099PA1]
          Length = 397

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 197/387 (50%), Gaps = 25/387 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SISSIF 75
           +Y+H PFC  +C YCDF+++V    +G +    ++ +   E++      G     +S+IF
Sbjct: 24  IYLHVPFCASRCGYCDFSTYVLS-AMGDDAVAGYLDAAHQELELAADALGDAQPPVSTIF 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+NR+S+
Sbjct: 83  FGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGINRLSM 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +    W   L   
Sbjct: 143 GMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRHSLDVT 202

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G   YE+S
Sbjct: 203 LTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYVNYEVS 262

Query: 255 N----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N     S       HN+ YW   D+ GIGPGAHS V  G+    +   KHP ++  ++  
Sbjct: 263 NWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHV-AGTRWWNV---KHPATYRNVLGD 318

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFI 368
               V + E L   Q+ +E +++ LRL +G+ + D         ++EC R  +   QG +
Sbjct: 319 RVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVVEQG-L 370

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++  RL     G  + D +I +L V
Sbjct: 371 GTMEEGRLVLNLSGRMVADRIITDLLV 397


>gi|188588627|ref|YP_001920250.1| coproporphyrinogen III oxidase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498908|gb|ACD52044.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 379

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 201/385 (52%), Gaps = 22/385 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           + +Y+H PFC +KC YCDF S+      G+E FI  ++  + + ++       I SIF G
Sbjct: 9   ISLYIHIPFCKQKCLYCDFPSYS-----GKEKFISGYIGALNKEIKDKASSYKIKSIFIG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS ++   +  +L  I     +  N+E TIE NP S+  +  +  +K  VNRIS+G+
Sbjct: 64  GGTPSYLDEIELEKLLKCI-NTLMLGENLEFTIECNPGSLSEDKLKIMKKYNVNRISMGL 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ +GR H   E      LAR + F  ++ DL++ LP Q++  W   L++ + 
Sbjct: 123 QSTKPSLLKEIGRIHTFEEFENNYLLARKVGFKNINIDLMFGLPNQSVEDWRKTLEKIIE 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +H+S Y L IE+GT FY ++    L LPSE    D+Y LT+     +G   YEISN 
Sbjct: 183 FNPEHISAYSLIIEEGTCFYNLYNQDKLNLPSEEKERDMYLLTKKFLKENGYSQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    E  HN+ YW+  +Y+G+G  + S ++    +    IE      L +   N +  V
Sbjct: 243 SKDKKECYHNIVYWKLNEYLGLGVSSSSYIEGKRIKNIDDIE------LYIKNINSNESV 296

Query: 317 EKEFLSSEQQAD--EFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIER 370
           E E   +    D  EF+ MGLR+  GI  +D++    +++D        +N++++  I  
Sbjct: 297 ENEIYENNINDDMEEFMFMGLRMIRGIEERDFKERFKKDIDEVYGDVIYKNIKQELLIRN 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+  T RG+ + +SV+++  +
Sbjct: 357 G--GRIYLTSRGIEVSNSVMSDFII 379


>gi|329116701|ref|ZP_08245418.1| putative coproporphyrinogen dehydrogenase [Streptococcus parauberis
           NCFD 2020]
 gi|326907106|gb|EGE54020.1| putative coproporphyrinogen dehydrogenase [Streptococcus parauberis
           NCFD 2020]
          Length = 376

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 203/372 (54%), Gaps = 15/372 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++++ + E +      G + + +I+ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLRALIAEFRSF----GIKKLRTIYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  Q +  +L  + K+  +    E TIEANP  +  +  +  +K+ VNR+SLGVQ+  
Sbjct: 64  TSITAQQLDYLLTELVKDLDLPYLEEFTIEANPGDLTPDKIEVMKKSAVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++  + I  L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 DKHLKQIGRSHNEAQIYSTIDSLKEAGFHNISIDLIYALPGQTLDQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    +   A+G   YEISN S  G
Sbjct: 184 HLSLYSLILEHHTIFMNKMRRGKLNLPTEDLEAEMFTYIINEMEANGFEHYEISNFSKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HNL YW   +Y G G GA   +    +R  + I    + +L  V   G A +  E 
Sbjct: 244 FYSQHNLMYWNNDEYYGCGAGASGYLDGVRYRNRVPI----QHYLSAVEA-GDARLTNEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           L++ ++ +E L +GLR + G+S   ++   G + D    +    L ++G ++  Q  ++R
Sbjct: 299 LTANEKMEEELFLGLRKKTGVSKSRFQGKFGISFDSRYGQIVDKLVKRGLLQEDQ-DQVR 357

Query: 378 CTQRGMTMLDSV 389
            T++G+ + DSV
Sbjct: 358 MTKKGLFLGDSV 369


>gi|295084743|emb|CBK66266.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides
           xylanisolvens XB1A]
          Length = 376

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 198/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTRYVQALCRELTMRKEYLKGEDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I +++ ++   EIT+EANP  +     +       NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEYN-GA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|172041017|ref|YP_001800731.1| coproporphyrinogen III oxidase [Corynebacterium urealyticum DSM
           7109]
 gi|171852321|emb|CAQ05297.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           urealyticum DSM 7109]
          Length = 421

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 196/419 (46%), Gaps = 51/419 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------------NFIQSFLTEMQ-----WM 62
           G+Y+H PFC  +C YCDFN++                      ++ +   E++     W 
Sbjct: 4   GLYIHVPFCASRCGYCDFNTYTPAELAADPASMGSAQGRTPAGYLDALEVELELAAAAWD 63

Query: 63  R----QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           R    +      +S++FFGGGTPS++  + +   L+ + +   ++ + E+T EANP S  
Sbjct: 64  RRGLYEGESDPGVSTVFFGGGTPSMLGAEGLVRALNAVRRTVGLAPDAEVTTEANPESTS 123

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
              F   R+AG NRISLG+QS     L+ L R H       A+  A+   F  ++ DLIY
Sbjct: 124 PEFFTRLREAGFNRISLGMQSAAGHVLKLLERQHTPGRPEQAVAEAKAAGFEHVNLDLIY 183

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +        L   +   VDH+S Y L +E GT   +  + G+L  P E+V  D Y 
Sbjct: 184 GTPTERDEDLARSLDAVIEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVYADRYR 243

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA--I 295
           +        G   YE+SN +  G E  HNL YWR G + G GPGAH  V++     A  +
Sbjct: 244 MIDERLVEAGFQWYEVSNWAKPGGECEHNLIYWRDGQWWGAGPGAHGCVRLREDAAAQYL 303

Query: 296 SIE-------------------KHPES-WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
            +E                   K+P   W  +++++    V  E LS      E LM+GL
Sbjct: 304 PVEAAERTGAEDFSGITRLVNAKYPARYWEALMQRHDLPAVTFEPLSQADLTTEHLMLGL 363

Query: 336 RLREGISVKDWEMLAGRNLDIECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANL 393
           RLREG+++     LAG   +IE     Q  G +E   +  RLR T++G  ++D ++ +L
Sbjct: 364 RLREGVALAG---LAGTEAEIE---RYQHLGLLEVDARAQRLRVTEQGRYLVDGIVTDL 416


>gi|284030344|ref|YP_003380275.1| oxygen-independent coproporphyrinogen III oxidase [Kribbella
           flavida DSM 17836]
 gi|283809637|gb|ADB31476.1| oxygen-independent coproporphyrinogen III oxidase [Kribbella
           flavida DSM 17836]
          Length = 401

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 200/386 (51%), Gaps = 19/386 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ-LTG-PR 69
           G+   G Y+H P+C  +C YCDFN++      G   Q ++ ++ + E++  R+ L G  R
Sbjct: 26  GARPFGFYLHVPYCAFRCGYCDFNTYTATELGGGASQASYAETAVQEVRLARRVLPGLER 85

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTP+L+  +++  +L  +   + ++++ E+T EANP SV+    +   +AG
Sbjct: 86  PVDTVFFGGGTPTLLPARDLGRMLAAVRDEFGLAADAEVTTEANPESVDQRYLEELLEAG 145

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             R+S G+QS     L+ L R H    A+ A+  A    F  ++ DLIY  P +T+  W 
Sbjct: 146 FTRVSFGMQSASSHVLQILDRRHTPGRALEAVKEATAAGFEHVNLDLIYGTPGETLEDWR 205

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L+ ALS A DH+S Y L +E GT   +  + G+L +P ++   D Y L   + +  GL
Sbjct: 206 TSLESALSAAPDHVSAYALIVEDGTQLARRVRRGELPMPDDDDLADKYVLADDLLTRAGL 265

Query: 249 HAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             YE+SN +    A   HN  YWR   + G+GPGAHS V      V     KHP ++   
Sbjct: 266 SWYEVSNWARTEDARCRHNELYWRGDTWWGVGPGAHSHVG----GVRWWNVKHPSAYADR 321

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +         +E L  E +  E +++ +RLR G+ + D    AGR+     +      G 
Sbjct: 322 MAAGESPAYAREILDEETRRVERVLLEIRLRAGLPL-DVLDAAGRSAVPGLD------GL 374

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           ++  +  RL  T+RG  + D+V+ +L
Sbjct: 375 VDE-RDGRLVLTRRGRLLADAVVRDL 399


>gi|189485369|ref|YP_001956310.1| coproporphyrinogen dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287328|dbj|BAG13849.1| coproporphyrinogen dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 375

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 200/360 (55%), Gaps = 24/360 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC F S ++   V    ++ + +  +   +      +I SI+ GGGT
Sbjct: 4   LYIHIPFCKQKCLYCSFFS-IKYDNVLANRYVDALIEHVGQFKN----ENILSIYVGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++  + I  +L  ++    +S+  E T E NP SV        ++ GVNR+S+G+QS+
Sbjct: 59  PSVLSSEQIQKLLQALSDILNLSTIKEFTFELNPESVSKEKLHILKQLGVNRLSIGLQSV 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           E++SL+FLGR H+          AR   F  ++ DLIY LPKQT+  WE  L++ L +  
Sbjct: 119 EDKSLKFLGRLHSFKTFCYVYDTARKEGFTNINIDLIYGLPKQTLEDWEQVLKKTLLFNS 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLSLY  ++E+ T FYK     + ++ ++++  D+Y+ +  I + +G + YEISN S  
Sbjct: 179 EHLSLYPFSVEENTPFYK-----NGIITNDDIQRDIYDESMKILTNNGYNHYEISNWSKK 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE--SWLKMVRKN------ 311
             ES HN NYWR  +YIG+G GA   +K   ++   +IEK+ E  S L++V+ +      
Sbjct: 234 ERESFHNTNYWRNLEYIGLGAGASGYLKRRRYKNIENIEKYIELCSSLQVVKGDCFRQYS 293

Query: 312 --GHAVVEKEFLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERN--LQRQG 366
                  E E++ S+    E +M+GLR L EGI++  +       + +EC +N  L R+G
Sbjct: 294 NLSFLETENEYIDSKLYKTETIMLGLRLLDEGINISCFNNPKHYYILLECLKNKMLNRKG 353


>gi|294647163|ref|ZP_06724762.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CC 2a]
 gi|294809226|ref|ZP_06767942.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides xylanisolvens SD CC 1b]
 gi|292637450|gb|EFF55869.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CC 2a]
 gi|294443620|gb|EFG12371.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 376

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 197/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTRYVQTLCRELAMRKEYLKGEDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I K++ ++   EIT+EANP  +             NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIRKHYGLNHCQEITLEANPDDLSQEYLGMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEYN-GA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|323142976|ref|ZP_08077684.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Succinatimonas hippei YIT 12066]
 gi|322417249|gb|EFY07875.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Succinatimonas hippei YIT 12066]
          Length = 378

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 207/384 (53%), Gaps = 27/384 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISS 73
            N  G+Y+H+PFC+ KCPYCDFNS+ +     ++      L E  + W  +L   R   S
Sbjct: 8   DNYTGLYIHYPFCMHKCPYCDFNSYAKGIDESRDELYFLRLKEDFLFWKPKLKD-RKFIS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL + + I   +D IA    +S + EIT+EANP +V++N  + ++ AG+NR+
Sbjct: 67  VFIGGGTPSLCKAELIGNFIDFIAP--YLSKDCEITMEANPGTVDINKLKDFKTAGINRL 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS ++  L+ +GR H+A+ A  A   A +  F   + DL++ LP Q++     +++
Sbjct: 125 SLGVQSFDDALLKRIGRIHDAAAAKKACEDADKCAFSAFNIDLMHGLPGQSLEAALHDIK 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ---SITSAHGLH 249
            A +    HLS Y+LTIE+ T F K        LPSE+   +LY + +   ++  + G +
Sbjct: 185 IAAALNCSHLSWYELTIEEDTYFGKHTP----TLPSED---ELYAIEEKGFALLKSLGFN 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S  S      +HN NYWR+GDY+GIG GAHS++  GS  +  +    P  +LK   
Sbjct: 238 RYEVSAFS-REKHCVHNENYWRFGDYVGIGAGAHSKLFNGSTTIRRACPASPSDYLKGDF 296

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
              + V + +         E+++  LRL   I   ++++  G++  +  +  L +   + 
Sbjct: 297 GKFYTVEDSDI------PFEYMLNRLRLFNDIKTFEYKLHTGQDFSL-VKGVLDKAASLS 349

Query: 370 RVQF--SRLRC-TQRGMTMLDSVI 390
            ++F      C T  G  ML+ ++
Sbjct: 350 LIEFKDDETYCVTAYGRQMLNDIL 373


>gi|54023388|ref|YP_117630.1| coproporphyrinogen III oxidase [Nocardia farcinica IFM 10152]
 gi|54014896|dbj|BAD56266.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nocardia farcinica IFM 10152]
          Length = 424

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 177/337 (52%), Gaps = 16/337 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---------QWMRQL 65
           G    G+YVH PFC  +C YCDFN++    ++G     QS+L  +         Q+ R  
Sbjct: 44  GGGPFGIYVHVPFCATRCGYCDFNTYTA-GELGTSASPQSWLAALRGELATAAAQFARLP 102

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +    ++++F GGGTPSL+  + +A +LD +  N+TV+++ EIT E+NP S     F+  
Sbjct: 103 SPVPPVATVFVGGGTPSLLGGEGLAEVLDAVRANFTVAADAEITTESNPESTSPRFFERL 162

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R+AG  RISLG+QS  +  L  L R H    A+AA   AR   F  ++ DLIY  P +T 
Sbjct: 163 REAGYTRISLGMQSAAQHVLAVLDRTHTPGRAVAAAREARAAGFEHVNLDLIYGTPGETD 222

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  L   L+  VDH+S Y L +E GT   +  + G+L  P E+V    Y       +
Sbjct: 223 ADLDATLDAVLAAGVDHVSAYSLIVEDGTALARRVRRGELPAPDEDVLAARYERIDRRLT 282

Query: 245 AHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GL  YE+SN +    A   HNL YW  GD++G GPGAHS +      V     KHP  
Sbjct: 283 AAGLAWYEVSNWAATESARCRHNLGYWDGGDWLGAGPGAHSHLG----GVRWWNVKHPAR 338

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           + + V + G      E L+ +++  E +M+ +RLR G
Sbjct: 339 YAERVARGGLPAAGWEALTDDERYLERVMLTVRLRTG 375


>gi|83589446|ref|YP_429455.1| coproporphyrinogen III oxidase, anaerobic [Moorella thermoacetica
           ATCC 39073]
 gi|83572360|gb|ABC18912.1| coproporphyrinogen III oxidase, anaerobic [Moorella thermoacetica
           ATCC 39073]
          Length = 388

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 196/385 (50%), Gaps = 29/385 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFCV+KC YCDF S+  +       + +    EM+       P   +++F GGGT
Sbjct: 16  IYIHIPFCVRKCNYCDFISYPEQSPEVMAVYCRLLEEEMKLAAGTWQPGPAATVFLGGGT 75

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    +  IL  +   +      E+++EANP ++ +   +  R AGVNR+SLGVQS 
Sbjct: 76  PTILPADLLERILVAVEGYFNRQPEAEVSVEANPGTITLEKLRVLRSAGVNRLSLGVQSF 135

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++ L+ +GR H   +   A HLAR   F  ++ DLI+ LP QT+  W+  L+ AL+   
Sbjct: 136 DDRLLKAMGRIHRRRDIYQAYHLARRAGFANINLDLIFGLPGQTLENWQATLREALALQP 195

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HL+ Y L +E+ T + ++   G+L LP E + + +Y   +   +A G   YEISN +  
Sbjct: 196 EHLAAYSLQVEEDTPWGRLAAAGNLNLPGEELELAMYQEAREKLAAAGYQQYEISNFARP 255

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVK---------VGSHRVAISIEKHPESWLKMVRK 310
           G    HN+ YW    Y+G+G  A S  +         +  +  A+S  + P +       
Sbjct: 256 GYRCRHNVTYWLNHPYLGLGAAAASSWRGERWQNYKNLEQYGAALSAGRLPRA------- 308

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQG 366
                 E E  +  QQ  E + M LRL  G++++ +    G++       E ER L R G
Sbjct: 309 ------EIEVTTPRQQMAETMFMSLRLLAGVNLQAFRQRFGKDAREVYAGEMER-LLRAG 361

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIA 391
            IE VQ   L+ T+RG+ + + V A
Sbjct: 362 LIE-VQGHHLKLTERGLPLANEVFA 385


>gi|306833861|ref|ZP_07466986.1| coproporphyrinogen dehydrogenase [Streptococcus bovis ATCC 700338]
 gi|304424055|gb|EFM27196.1| coproporphyrinogen dehydrogenase [Streptococcus bovis ATCC 700338]
          Length = 376

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 203/378 (53%), Gaps = 27/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       ++++Q+ + E +          + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDDYLQALIREFESY----DIEQLRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SLGVQ+  
Sbjct: 64  TSITAQQLDYLLTDLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN S+  + I HL    F  +S DLIYALP QTM   +  + +A++  + 
Sbjct: 124 DKQLKRIGRSHNESQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKAIALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I+     +LK V + G+A + +E 
Sbjct: 244 FESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPIQH----YLKAVSE-GNARLSEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI--ERVQFSRL-- 376
           L+ ++  +E L +GLR + G+S+  +E   G + +       +R G I  E  Q   L  
Sbjct: 299 LTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFE-------ERYGQIVTELCQHGLLVP 351

Query: 377 -----RCTQRGMTMLDSV 389
                R T++G+ + D+V
Sbjct: 352 DDEVVRMTKKGLFLGDTV 369


>gi|163816740|ref|ZP_02208103.1| hypothetical protein COPEUT_02930 [Coprococcus eutactus ATCC 27759]
 gi|158447997|gb|EDP24992.1| hypothetical protein COPEUT_02930 [Coprococcus eutactus ATCC 27759]
          Length = 426

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 216/406 (53%), Gaps = 34/406 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           L +Y+H PFCVKKC YCDF       S ++ Y V +E +I++   E++    L    S+ 
Sbjct: 24  LSIYIHIPFCVKKCVYCDFLSFPVGTSCMQGYGVYREKYIEALCEELRSYAYLAETHSVK 83

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTPSL+E   I +I+  +   + V+ + EI+IE NP ++       Y   G+NR
Sbjct: 84  TIYIGGGTPSLLEADEITMIMTTVRSIFDVAEDAEISIEVNPGTLTSRKAADYIANGINR 143

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS +   L+ LGR HN  + +AA  +AR   F  ++ DL+  +P QTM  +   L
Sbjct: 144 MSIGLQSAQRDELQVLGRIHNYDQFLAAFDMAREAGFRNINIDLMSDIPGQTMRSYLDTL 203

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV--LPSENVAVDLYNLTQSITSAHGLH 249
           ++ L    +H+S Y L +E GT    +    +L+  +P E+V  ++Y++T  +  + G H
Sbjct: 204 EKVLRCKPEHISSYSLIVEAGT---PLAASPELISRIPDEDVDREMYDITNKLLDSGGYH 260

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS----RVKVGSHRVAISIEK------ 299
            YEISN++  G E  HN+ YW  G+YIG+G GA S    R    +  +   I+       
Sbjct: 261 RYEISNYARHGYECRHNIVYWTLGEYIGVGIGAASFLYGRRYTNTSDIGEYIDTMENCHE 320

Query: 300 -----HPESWLKMVRK--NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 P +  + VR        V++E L++++  +E++ +GLR+  G+S + +    G 
Sbjct: 321 LVTYGDPVANSRKVRDLLEQMRTVDEE-LNTDRLMEEYMFLGLRMISGVSAERFNDYFGH 379

Query: 353 NL-DI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++ DI        +  G +E      +R T++G+ + ++++A+  +
Sbjct: 380 SIYDIYGPVIDKYKVSGHLED-DHGLIRLTKKGIDVSNTILADFLI 424


>gi|120404813|ref|YP_954642.1| coproporphyrinogen III oxidase [Mycobacterium vanbaalenii PYR-1]
 gi|119957631|gb|ABM14636.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium
           vanbaalenii PYR-1]
          Length = 394

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 182/382 (47%), Gaps = 14/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTG-PRSIS 72
           S   G+YVH PFC  +C YCDFN++      G   + ++ +  TE++      G P  + 
Sbjct: 21  SQPFGIYVHVPFCAVRCGYCDFNTYTPAELGGANPDGWLSALRTELRLAAAHLGEPPDVQ 80

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+    +  +LD I +++T++   E+T E+NP S     F G R+AG  R
Sbjct: 81  TVFVGGGTPSLLGAAGLTAVLDAIREDFTLAPGAEVTTESNPESTSPRFFDGLRRAGYTR 140

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS     L  L R H+   A+ A   AR   F  ++ DLIY  P +T        
Sbjct: 141 VSLGMQSTAPHVLAALDRVHSPGRALDAAREAREAGFDHVNLDLIYGTPGETDDDLVRSA 200

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L     +  G   Y
Sbjct: 201 SSAVEAGVDHVSAYALIVEDGTALARRVRRGEMPAPDDDVLARRYELLDRRLADAGFDWY 260

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN S  G +  HN+ YW  G++ G GPGAH  V      V     KHP ++     K 
Sbjct: 261 EVSNWSRPGGQCRHNIGYWDGGEWWGAGPGAHGYVD----SVRWWNVKHPNAYAAASDKG 316

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              V + E L       E +M+ +RLR G+          R      ER +   G + R 
Sbjct: 317 ELPVADFEALDEPTAHIEDVMLRVRLRTGLPAAALSAPERRR----AERAVA-DGLL-RT 370

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
               L  T RG  + D+V+ +L
Sbjct: 371 DGDALVLTDRGRLLADAVVRDL 392


>gi|94676535|ref|YP_588917.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219685|gb|ABF13844.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 385

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 185/342 (54%), Gaps = 24/342 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C+KKC YCDF +     KV  + +I   L +++    L    S+ +IF GG
Sbjct: 14  LSLYIHIPWCMKKCCYCDFPTTTLHNKVPNKEYISHLLIDLKQSLLLIDGYSLKTIFIGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  ++D I K   +++N+E+TIE NP ++  N+   Y+  G+NRIS+GVQ
Sbjct: 74  GTPSLLTIEMLEKLIDSIYKMVPLATNLELTIEVNPGTINENHLISYQTIGINRISIGVQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +     L  LGR H   +A   +  A  I F  ++ D++Y LP QT+ Q   +L++A++ 
Sbjct: 134 TFNRNHLIHLGRLHRPEDATNIVSFASAIKFNSINLDIMYGLPNQTVNQALDDLRQAIAL 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  H+S YQLTIE  T+F+         LP +++  D+Y     +  + G   YEIS ++
Sbjct: 194 APQHISWYQLTIEPNTIFWNTKPK----LPKDDIIWDIYQQGNELLMSSGYQPYEISAYA 249

Query: 258 FLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR-KNGHAV 315
              + + LHN+NYWR+GDY+GIG  AHS++ +    +           ++MV+ +N    
Sbjct: 250 HNKSYQCLHNMNYWRFGDYLGIGCSAHSKLTLPDGTI-----------IRMVKVRNPFLY 298

Query: 316 VEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAG 351
           ++ ++L    Q        E+ M   RL E +   ++  L  
Sbjct: 299 MKGKYLDKSYQVALSDLPFEYFMNRFRLFEIVPRNEFTQLTS 340


>gi|301060327|ref|ZP_07201190.1| putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium NaphS2]
 gi|300445523|gb|EFK09425.1| putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium NaphS2]
          Length = 367

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 196/377 (51%), Gaps = 26/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV-----GQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G+YVH PFC  KCPYC F S   +  V     G E  I  F T+ ++ R         ++
Sbjct: 4   GLYVHVPFCDSKCPYCGFYSIPSKTPVAGWLKGLEKEI--FHTKNRFER-------FDTL 54

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS++  +++  IL  I  ++ ++ + EIT+EANP  V +      R  GVNRI+
Sbjct: 55  YLGGGTPSMLSDRDLERILSLIFDHYPLTPDAEITLEANPCQVTLAKADFIRSLGVNRIN 114

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS +++ L+FLGR H++  A  A+ HL    F  +  DLIY    Q M  W   L++
Sbjct: 115 LGVQSFDDRVLKFLGRRHSSQRAEDAVRHLRSAGFQNIGLDLIYGFKAQPMKAWMTTLKK 174

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+  +HLS YQLT+EKGT+F +  +  + ++  E  A   +  T +     G   YE+
Sbjct: 175 ALSFEPEHLSCYQLTLEKGTVFKRRSQKNNSIILPEKTAAAHFLATSAFLENKGYVHYEV 234

Query: 254 SNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN +   + ES HN  YWR+  Y+G+GP AHS           S+ +    + K + +N 
Sbjct: 235 SNFALNKSLESRHNRKYWRHIPYLGLGPSAHSFDGKQRWWNVRSVRE----YCKALNENR 290

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             V   E L+ EQ   E L +G+R R G+        +G  L +     LQRQG + +++
Sbjct: 291 LPVEGNETLTKEQLHLESLALGVRTRHGVDTTILPPASGNALFM-----LQRQGLL-KIK 344

Query: 373 FSRLRCTQRGMTMLDSV 389
                 T+RG  M D +
Sbjct: 345 RGHAIPTRRGYLMADHL 361


>gi|166364894|ref|YP_001657167.1| coproporphyrinogen III oxidase [Microcystis aeruginosa NIES-843]
 gi|166087267|dbj|BAG01975.1| coproporphyrinogen III oxidase, anaerobic [Microcystis aeruginosa
           NIES-843]
          Length = 390

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 175/333 (52%), Gaps = 13/333 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ-----SFLTEMQWMRQLTGPRSISSIF 75
           VY+H PFC ++C YCDF   V   +     F         L E   + Q TG + + +IF
Sbjct: 10  VYIHIPFCRRRCFYCDFPIFVLGNRTNPATFPPVVEYVEILQEEISLSQGTG-KPLETIF 68

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + +  ILD +AK +  ++++EI++E +P++  +   QGY  AGVNR+SL
Sbjct: 69  FGGGTPSLLPVELLGSILDTLAKKFDFAADIEISMEIDPATFSLEQLQGYLSAGVNRVSL 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +E  L+  GR+H   +   A+ L + +     S DLI  LP+QT+T WE  L++A
Sbjct: 129 GVQAFQEPLLQVSGRSHTVKDIYQAVELIQGLGIVNYSLDLISGLPQQTLTDWENSLEKA 188

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +     HLS Y L +E  T F K ++ G   LP +     +Y L     +  G   YEIS
Sbjct: 189 IKLQPAHLSCYDLVLEAVTPFGKQYQPGKKPLPDDETTAKMYVLAGEKLALAGYQHYEIS 248

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G +  HN  YW    Y G G GA S +    H+   +  +    +   V++    
Sbjct: 249 NYAKPGYQCRHNRVYWENRPYYGFGMGAASYL----HQQRFTRPRKSRDYFAWVKEGCQI 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            VEK  L  +    E LM+GLRL EG+S+   E
Sbjct: 305 DVEKNSLIDDLL--ETLMLGLRLAEGVSLPAIE 335


>gi|282883122|ref|ZP_06291721.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus lacrimalis 315-B]
 gi|281296934|gb|EFA89431.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus lacrimalis 315-B]
          Length = 380

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 187/373 (50%), Gaps = 11/373 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + +Y+H PFC  +C YCDF S V   K   E +I+    E+   + +   R IS+IF 
Sbjct: 5   NKISIYIHIPFCRSRCHYCDFCSSVID-KKQVEKYIKYLKKEIHLYKDILEGREISTIFI 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+   I  IL+   KN+  S ++EITIEANP+S+ +   + YR   +NRIS+G
Sbjct: 64  GGGTPSSIDEIFIGQILEEF-KNFNFSKDIEITIEANPNSLSLEKLKKYRNFNINRISIG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS   + L+ +GR HN  E    +   +   F   + DL+ ALP QT+   E  ++   
Sbjct: 123 AQSFNNKILKTIGRIHNKEEIFKTVEKIKEAGFTNFNIDLMLALPYQTLKDIEESVEILK 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L IE  T   K++     + PSEN+   +Y+         G   YEISN
Sbjct: 183 ILNPNHISYYSLIIEDNTNIKKLYDKNSSLFPSENMDRKMYHYLVDNLEKIGYDQYEISN 242

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +    E  HNL+YW   DY+G G  A S ++        S      S+   + K    +
Sbjct: 243 FAKKSFECKHNLSYWTLKDYLGFGLSASSNLREKRFTNTCSF----PSYYNSLDKEEKPI 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
              E LS + + +EF +MG+RL  GI  K++E +   N     E+ +    + G IE V+
Sbjct: 299 DFSEILSKKDRMNEFSIMGIRLNSGIDTKNFEEIFSTNFFKYYEKEIDKHIKDGLIE-VK 357

Query: 373 FSRLRCTQRGMTM 385
             ++  +++G  +
Sbjct: 358 KDKICLSKKGRDL 370


>gi|332140337|ref|YP_004426075.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550359|gb|AEA97077.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 341

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 182/339 (53%), Gaps = 30/339 (8%)

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G R + +IF GGGTPSL     +A IL+G+     +S N EIT+EANP +VE   F G+ 
Sbjct: 16  GDRVVETIFIGGGTPSLFSADAMADILNGVKARVNLSDNAEITMEANPGTVEAGKFAGFY 75

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +AGVNRIS+G+QS + + L+ LGR HN S+A  A+  A +   P  + DL++ LP+Q++ 
Sbjct: 76  QAGVNRISVGIQSFQPKHLKVLGRIHNESQAENAVKQAHSAGLPTFNLDLMHGLPEQSVD 135

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               +L++ ++    HLS YQLTIE  T FY    +    LP +++  ++      +   
Sbjct: 136 NAMSDLKQGIALNPYHLSWYQLTIEPNTPFYSKPPE----LPDDDILWEIQEQGHKLLEN 191

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS----HRVAISIEKHP 301
            G   YEIS ++  G +  HNLNYWR+GDY+GIG GAH ++   +    HR      KHP
Sbjct: 192 AGYQQYEISGYAKAGHQCRHNLNYWRFGDYLGIGCGAHGKITDAANGTIHRTVKV--KHP 249

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQAD------EFLMMGLRLREGISVKDWEMLAGRNLD 355
             +++M R          +L ++ Q +      EF M   RL E   + D+    G  + 
Sbjct: 250 RGYMEMSRP---------YLDTQSQVEAGDLPFEFFMNRFRLVEPCPISDFSDFTGIAIT 300

Query: 356 IECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
            E ER L   Q QG +  +  +  + T +G   L+S+++
Sbjct: 301 DEVERALCDAQHQGLLS-ISDTHWQVTAKGRRYLNSLLS 338


>gi|310287389|ref|YP_003938647.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           bifidum S17]
 gi|309251325|gb|ADO53073.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           bifidum S17]
          Length = 464

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 190/416 (45%), Gaps = 47/416 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           +Y+H PFC+++C YCDFN++          + N+    + EM+ +R       +  P  +
Sbjct: 41  IYIHVPFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEP-PV 99

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + G  
Sbjct: 100 STVFFGGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGFT 159

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   +
Sbjct: 160 RVSFGMQSAVPHVLKTLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSV 219

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  Y
Sbjct: 220 RTAVDLGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWY 279

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--------------GSHRVAISI 297
           EISN S  G ES HNL YWR  D+ G+GPGAHS                   +  V+ S+
Sbjct: 280 EISNWSRPGYESRHNLGYWRNVDWAGLGPGAHSHYNTVMGSSTDGDAANSDAAGDVSTSV 339

Query: 298 EK---------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV----- 343
                      HP  W   +          E +S  +  +E +M+GLR+REG+ +     
Sbjct: 340 TSTSMRGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNR 399

Query: 344 --------KDWEMLAGRNLDIECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVI 390
                   +D      R +D  C   L   G I           T+RG  + D+VI
Sbjct: 400 HIEAVNRAQDAAQGTLRIIDDACLTPLIGDGLITLDPTTGHAVATRRGRLLNDAVI 455


>gi|312196045|ref|YP_004016106.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EuI1c]
 gi|311227381|gb|ADP80236.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EuI1c]
          Length = 438

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 195/385 (50%), Gaps = 18/385 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQL--TGPRSIS 72
           + G+Y+H P+C  +C YCDFN++      G     +F  + + E+    ++   G   + 
Sbjct: 59  AFGIYIHVPYCATRCGYCDFNTYTAAELGGGASAASFATTAIAELALAARVLGDGTPPVD 118

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+L+ P ++  +L  +   + +    E+T EANP SV+    +  R AG  R
Sbjct: 119 TVFFGGGTPTLLPPADLGALLAAVDDTFGLRPGAEVTTEANPESVDAVALEQLRAAGFTR 178

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS G+QS     L  L R H        +  AR   F ++S DLIY  P ++   W   L
Sbjct: 179 ISFGMQSARPHVLATLDRRHTPGRLPDVVCWARKAGFEQVSVDLIYGAPGESDRDWAASL 238

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+  A DH+S Y LT+E GT  ++  + G+L+ P +++  D Y     + +A GL  Y
Sbjct: 239 AAAIELAPDHVSAYALTVEDGTRLFRRVRRGELLEPDDDLLADRYVQADEMLAAAGLTNY 298

Query: 252 EISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           E+SN  S   A   HNL YWR   + G+GPGAHS V  G+    +   +HP  + + +R 
Sbjct: 299 EVSNWASGRDAWCRHNLGYWRGDTWWGVGPGAHSHVG-GARWWNV---RHPTEYTERLRS 354

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                  +E + ++ +  E +M+ +R+ +G+   +    AGR+   E    L   G ++R
Sbjct: 355 GRSPAQARELVDTDARYVERVMLAVRMSDGLPAAELTE-AGRSSLAE----LAATGLLDR 409

Query: 371 VQFS--RLRCTQRGMTMLDSVIANL 393
              +  R++ T+ G  + D+V+  L
Sbjct: 410 AALADGRIKLTRDGRLLTDTVVRAL 434


>gi|320140532|gb|EFW32386.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MRSA131]
          Length = 374

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 171/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GERYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVS 317


>gi|313893429|ref|ZP_07827001.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442070|gb|EFR60490.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 399

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 185/334 (55%), Gaps = 9/334 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRS--ISSI 74
            +G+YVH PFC +KC YCDF ++ +  +   E ++ + + EM  W+ +    +S  I +I
Sbjct: 20  DMGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEMDLWVSEHPESKSKPIDTI 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP+ +  Q + +I+D I   +T++ +  +TIE+NP  +++       K G NRIS
Sbjct: 79  YFGGGTPTELSIQQLQMIVDKIKSTFTITDDCHMTIESNPGEIDLQYLTQLVKLGFNRIS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+QT+   +  L  
Sbjct: 139 FGVQTFDDKALTMLHRSHNGEKAKQAVYEAKEAGFTDINIDLIYGLPRQTLEDIQHNLHI 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                ++H+S Y L +E GT  Y + +   + +PSE++   +Y+         G   YEI
Sbjct: 199 LKDLPINHISTYGLQVEVGTYLYHLVQKNLISIPSESIDEAMYDTMMEGLKNQGFERYEI 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +   + S HNL YW Y DY+G G GAHS    G  R   S  ++   +++ V +   
Sbjct: 259 SNFAKDSSYSRHNLKYWHYVDYLGFGAGAHSFYD-GIRR---SNNRNVMPYIQAVDRYTM 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             ++ E ++ E+  ++F  + LR + G+  + +E
Sbjct: 315 PTIDTETITVERAQEDFCFLALRTKWGLDEQKFE 348


>gi|87160452|ref|YP_494238.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87126426|gb|ABD20940.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
          Length = 374

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 171/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNTGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVS 317


>gi|302519006|ref|ZP_07271348.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB78]
 gi|302427901|gb|EFK99716.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB78]
          Length = 413

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 197/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++  R
Sbjct: 25  LDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+   
Sbjct: 85  RVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY  P
Sbjct: 145 LETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y +  
Sbjct: 205 GESDADWRASLEAAIGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYLIAD 264

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + +  G   YE+SN  +   A  LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 ELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E L  E +  E +++ LRL EG  + D  + AGR       
Sbjct: 321 HPGAYAAALAGGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRG---AAA 376

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
           R+L   G ++   +++     T RG  + D+V+ +L
Sbjct: 377 RHLG-DGLLDPGAYAKGAAVLTLRGRLLADAVVRDL 411


>gi|300741545|ref|ZP_07071566.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           dentocariosa M567]
 gi|300380730|gb|EFJ77292.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           dentocariosa M567]
          Length = 423

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 198/406 (48%), Gaps = 36/406 (8%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWM-RQLTGP 68
           G  +    +YVH PFC  +C YCDFN++        +G   +      E+ +  R L   
Sbjct: 24  GCQNRDFSLYVHIPFCSVRCGYCDFNTYATEDFGDGIGLGTYADDATAEIFFAARTLEAS 83

Query: 69  ----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R + ++FFGGGTP+ +   ++  IL      + +    E+T EANP SV   + Q 
Sbjct: 84  GVVKRPLHTVFFGGGTPTKLPAYDLVRILKTAIDIFGIEDGAEVTTEANPDSVTYEDLQT 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            +  G  R+S G+QS+  + L+ L R H        +  AR+I  ++S DLIY  P +T+
Sbjct: 144 LKDGGFTRVSFGMQSVVPEVLKVLDRTHTPENVPKVVAWARDIGLQVSIDLIYGSPSETL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            QWE  +Q A+SY  DH+S Y L +E GT      + G+  +P +++  D+Y   + +  
Sbjct: 204 EQWEQSVQAAISYQPDHISAYSLIVEDGTKLAAQIRRGEYTMPDDDLMADMYLRAEDLLM 263

Query: 245 AHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
             G   YE+SN+S      S HN+ YWR  D+ GIGPGAHS +  G+    I   KHP  
Sbjct: 264 QAGYRWYEVSNYSRSEHTRSDHNMAYWRNQDWWGIGPGAHSHIN-GTRWWNI---KHPVP 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-------GRNLDI 356
           +   VR        +E L S  ++ E +M+ +R+REG+ +   E+LA       G +L  
Sbjct: 320 YAHRVRAGESPAAAREVLDSGTRSFETIMLLIRVREGLPMH--ELLAVHPAADLGSSL-- 375

Query: 357 ECERNLQRQGFIERVQFSR---------LRCTQRGMTMLDSVIANL 393
              R L  QG IE   F+          ++ T +G  + D+V   L
Sbjct: 376 ---RWLLSQGLIEPDIFTNTGAPNPDASVKLTLQGRLLGDAVTREL 418


>gi|294848614|ref|ZP_06789360.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9754]
 gi|294824640|gb|EFG41063.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9754]
          Length = 385

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 171/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNTGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVS 328


>gi|119512056|ref|ZP_01631150.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
 gi|119463282|gb|EAW44225.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
          Length = 393

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 191/341 (56%), Gaps = 18/341 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMR 63
           N++G  S++   YVH PFC ++C YCDF  +V   ++  E       +++    E+  M 
Sbjct: 6   NISGIVSSA---YVHIPFCRRRCFYCDFPVYVVGDRLRGETSGTISQYVEVLCQEIA-MT 61

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             +G   + +IFFGGGTPSL+  + +  IL  + K + +++  EI++E +P + ++ +  
Sbjct: 62  AASG-EPLKTIFFGGGTPSLLSIEQLQQILVTLEKQFGIAAGAEISMEVDPGTFDLAHLS 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
           GY   GVNR+SLGVQ+ +++ L+  GR+H+  + + ++ L   +     S DLI  LP Q
Sbjct: 121 GYGSVGVNRVSLGVQAFQQELLQVAGRSHSVVDILTSVELIHQVEIAEFSLDLISGLPHQ 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++ QW+  L++A++    H+S+Y LTIE GT F + +K GD  LP++   V +Y   Q +
Sbjct: 181 SLEQWQDSLKQAVTLMPTHISIYDLTIEAGTAFGRYYKPGDKPLPTDETTVKMYETAQQV 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            ++ G   YEISN++  G +  HN  YW    Y   G GA S ++ G      +  +  +
Sbjct: 241 LTSAGYEHYEISNYARPGHQCQHNRVYWENRPYYAFGMGAASYIE-GKR---FTRPRKTQ 296

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            + + V+  G  V++ E    ++   E LM+GLRL EG+S+
Sbjct: 297 EYYQWVKAGG--VIDCEVTPPKEVLLETLMLGLRLAEGVSL 335


>gi|261856896|ref|YP_003264179.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
 gi|261837365|gb|ACX97132.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
          Length = 388

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 196/381 (51%), Gaps = 17/381 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH P+CV+KCPYCDFNSH  + K + + ++I + L +++    L   R I +IF 
Sbjct: 11  PLALYVHLPWCVEKCPYCDFNSHGLKGKTLPERDYIDALLRDVERELPLIWGRPIETIFI 70

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P+ I  ++ G+     +    E+T E NP +    +   YR  G+ R+S+G
Sbjct: 71  GGGTPSLFHPEAIDRLMCGLRALLDLRFCCEVTFEVNPGTEMAGHLADYRAIGITRVSIG 130

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  E+ L+ LGR H+A  A  AI  A +      + DL++ LP+Q+  +   +L  A+
Sbjct: 131 VQSFNERHLKKLGRIHDAKAAFRAIEAAHDAGLNSFNIDLMHGLPEQSAEEALADLHTAI 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEI 253
           S    HLS YQLT+E  T F         VLP +     +    Q + + H  GL  YE+
Sbjct: 191 SLNPPHLSWYQLTLEPNTPFAAHPP----VLPDDETMDRMQ--AQGLAALHEAGLIQYEV 244

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKN 311
           S ++    +  HN NYW +GDY+GIG GAH ++ + +       E  +HP  +L   +  
Sbjct: 245 SAYAQDNHQCQHNRNYWEFGDYLGIGAGAHGKITLAAENRIERRERLRHPNEYL--TKAG 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
               +    + +++   EF++  LRL +G  V  +    G  + +  +    L+++  I 
Sbjct: 303 TEQAITAHSIPTDELPFEFMLNALRLTDGFEVPLFTARTGMPIKVISDVLHQLEKEELI- 361

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
           R   +R+  T RG   L+ ++
Sbjct: 362 RWDITRIAPTLRGTRYLNDLL 382


>gi|57234372|ref|YP_181584.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dehalococcoides ethenogenes 195]
 gi|57224820|gb|AAW39877.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dehalococcoides ethenogenes 195]
          Length = 378

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/339 (35%), Positives = 186/339 (54%), Gaps = 8/339 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            SL +Y+H+PFC++KC YC F S+  R      ++++    E++   + +G     S++F
Sbjct: 4   TSLALYLHFPFCLQKCGYCSFVSYPARLDC-LPDYVKCLRKEIK--SRASG-LYFHSLYF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P  +A IL GI     +  + EIT EANP ++ +      +  G+NR+SLG
Sbjct: 60  GGGTPSLLSPSQVADILAGIRTAAHLLPDAEITFEANPGTLALPYLPEIKSLGINRLSLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L  LGR HNA++A  A   AR   F  +S DLIY LP  +++ ++  L  AL
Sbjct: 120 IQSFSGAELTMLGRLHNAAKARQAYKQARAAGFNNISLDLIYGLPDSSVSSFKKNLAEAL 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A +H+SLY LT+E+ T  Y+  ++G L   +   A D Y   + I +  G   YEISN
Sbjct: 180 ALAPEHISLYGLTLEEDTPMYRQVQEGLLPEINAETAADQYQAAEDILAKAGYRHYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW+   Y+G+G   HS ++        S++++   W   +       
Sbjct: 240 WAKPGYESRHNLTYWQNRPYLGLGAAGHSFLENWRLANTSSLDEYLNRWQNDLPPTPS-- 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            E  +L  E Q  E +++GLRL +GI+ +D E   G+++
Sbjct: 298 -ENIYLDLENQLAETIILGLRLDKGITAEDIENRFGQHV 335


>gi|257884364|ref|ZP_05664017.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,501]
 gi|294616506|ref|ZP_06696287.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1636]
 gi|257820202|gb|EEV47350.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,501]
 gi|291590654|gb|EFF22382.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1636]
          Length = 388

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 195/382 (51%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     S+ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTASLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +  R+  T RG  + ++V 
Sbjct: 361 VNEE-DRVYLTPRGTFLGNNVF 381


>gi|302037184|ref|YP_003797506.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Nitrospira defluvii]
 gi|300605248|emb|CBK41581.1| putative Oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Nitrospira defluvii]
          Length = 392

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 195/378 (51%), Gaps = 20/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFG 77
           G+Y+H PFC ++C +C F   +   +  +E F+ S LTE++    ++L G   + S++FG
Sbjct: 8   GLYIHVPFCHQRCHFCAFYLEIHHARAAEE-FLGSLLTELRLYGEQRLFGSEPLQSVYFG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +A +L    + + +    EIT+EA+P SV  ++    R AG  R+S G 
Sbjct: 67  GGTPTTLSAPQLATVLSAARETFGLQDEAEITVEAHPGSVTQDSLSHLRNAGFTRVSFGA 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +S+ +  L  +GR  N    +  +  AR   F  ++ DL++ LP QT+  W   L++ + 
Sbjct: 127 ESMNQLELDRVGRPGNPMSTVQMVTAARTAGFTDLNLDLMHGLPGQTIDSWAASLRQIVE 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS Y LT+E+GT      + G +  P E +  ++ +L + I        YEISN+
Sbjct: 187 LAPTHLSCYALTVEEGTALQTAIRRGTVPAPDETLQNEMEDLAEDILGEADFTRYEISNY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
              G  S HN  +W  GDY+G+GP A S V  G     +S      ++   +R     V 
Sbjct: 247 CRPGFASRHNRLHWTGGDYLGLGPSAQSYV-AGRRFGNVS---DLSAYNAFLRTGTLPVT 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKD-----WEMLAGRNLDIECERNLQRQGFIERV 371
           E E LS+   A E L+ GLRL EGI++++     +  LAG+  ++  +  L+R+G     
Sbjct: 303 ESEQLSAADDACERLVFGLRLTEGITLEETGALAFSGLAGKVDELIGDDILERRG----- 357

Query: 372 QFSRLRCTQRGMTMLDSV 389
              R+R T RG    D+V
Sbjct: 358 --ERVRLTARGRRYADTV 373


>gi|311693171|gb|ADP96044.1| putative oxygen-independent coproporphyrinogen III oxidase [marine
           bacterium HP15]
          Length = 360

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 188/368 (51%), Gaps = 18/368 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           ++KCPYCDFNSH     + +  ++Q+ L ++         R I ++F GGGTPSL+    
Sbjct: 1   MRKCPYCDFNSHAFTGTIPESAYLQALLEDLDQDLAFATDRPIETVFIGGGTPSLMSGDF 60

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
              +   +      ++N EIT+EANP ++E   F  +R AG+NR+S+GVQS     L+ L
Sbjct: 61  YDRLFRELRARLAFATNAEITLEANPGTLEAGRFDAFRAAGINRLSIGVQSFNPDHLKTL 120

Query: 149 GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H+A  A  AI  AR   F   + DL++ LP QT  Q   ++Q AL Y   HLS YQL
Sbjct: 121 GRIHDADAAHRAIRAARRAGFDNFNIDLMHGLPGQTPGQAIEDIQTALDYKPPHLSWYQL 180

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+E  T FY    +    LP ++   D+Y         HG   YE+S  S  G  S HNL
Sbjct: 181 TLEPNTEFYSRPPE----LPDDDHLWDIYRRGSDYLHQHGYEDYEVSAWSLQGRASRHNL 236

Query: 268 NYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ 325
           NYW +GDY+ +G GAH ++ +  GS R      + P+++L  +   G      + ++ + 
Sbjct: 237 NYWTFGDYLALGAGAHGKISLVDGSIRRYWKT-RQPDAYLNRI---GSRTAGSDAIAVDD 292

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSRLRCTQRG 382
              EFLM  LRL+EG+    +    G  L    ++ ER    +  +      RL+ T  G
Sbjct: 293 LPLEFLMNALRLKEGVDESLFSERTGLPLTTVGVKLERLRNEKLLVS----DRLQATDLG 348

Query: 383 MTMLDSVI 390
              L+S++
Sbjct: 349 QRYLNSLL 356


>gi|57651976|ref|YP_186480.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           COL]
 gi|161509811|ref|YP_001575470.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|282920132|ref|ZP_06327857.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9765]
 gi|57286162|gb|AAW38256.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Staphylococcus aureus subsp. aureus COL]
 gi|160368620|gb|ABX29591.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|282594480|gb|EFB99465.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9765]
          Length = 385

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 171/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVS 328


>gi|229552410|ref|ZP_04441135.1| coproporphyrinogen dehydrogenase [Lactobacillus rhamnosus LMS2-1]
 gi|258539779|ref|YP_003174278.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus Lc 705]
 gi|229314236|gb|EEN80209.1| coproporphyrinogen dehydrogenase [Lactobacillus rhamnosus LMS2-1]
 gi|257151455|emb|CAR90427.1| Oxygen-independent coproporphyrinogen III oxidase [Lactobacillus
           rhamnosus Lc 705]
          Length = 381

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 191/370 (51%), Gaps = 16/370 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G Y+H PFC   C YCDFN   + +  GQ  ++++   L EM+ +        I +++ G
Sbjct: 3   GAYIHIPFCEHICYYCDFN---KVFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIETVYVG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLG 136
           GGTP+ + PQ +A++  GI ++     + E T EANP+ +   +  Q     GVNR+S+G
Sbjct: 60  GGTPTTLTPQQLAVLCQGI-RDILHFDHGEFTFEANPNDLLTTDKLQVLHDFGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  +  L+ +GR H A +   AI  AR + F  +S DLI+ LP Q+   +   LQ+AL
Sbjct: 119 VQSFNDDVLKRIGRIHRAKDVYTAIGNARKVGFDNLSIDLIFRLPDQSRDDFLNSLQKAL 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN
Sbjct: 179 ALDLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +  HNL YW+   Y G G GA   +    +     I++    +L  +  +   V
Sbjct: 239 FAKTGYQCRHNLLYWQNDKYFGFGAGAFGYLGRDRYHNYGPIKQ----YLAPLHADHLPV 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
           +    +   +Q +E + +GLR   G++   +       +D    E    L+ QG IER Q
Sbjct: 295 LAHHLVPVSEQIEEEMFLGLRTMAGVNEDRFYRRYHMTVDAVYGETVPELESQGLIER-Q 353

Query: 373 FSRLRCTQRG 382
              +R T RG
Sbjct: 354 NGYIRLTNRG 363


>gi|151221698|ref|YP_001332520.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|221139997|ref|ZP_03564490.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258450588|ref|ZP_05698650.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A5948]
 gi|262049156|ref|ZP_06022033.1| coproporphyrinogen III oxidase [Staphylococcus aureus D30]
 gi|262051243|ref|ZP_06023467.1| coproporphyrinogen III oxidase [Staphylococcus aureus 930918-3]
 gi|284024642|ref|ZP_06379040.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           132]
 gi|304380828|ref|ZP_07363488.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|150374498|dbj|BAF67758.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|257861746|gb|EEV84545.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A5948]
 gi|259160880|gb|EEW45900.1| coproporphyrinogen III oxidase [Staphylococcus aureus 930918-3]
 gi|259162825|gb|EEW47390.1| coproporphyrinogen III oxidase [Staphylococcus aureus D30]
 gi|302751413|gb|ADL65590.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340555|gb|EFM06489.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315198721|gb|EFU29049.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320144069|gb|EFW35838.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 374

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 171/322 (53%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVS 317


>gi|145223274|ref|YP_001133952.1| coproporphyrinogen III oxidase [Mycobacterium gilvum PYR-GCK]
 gi|145215760|gb|ABP45164.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium gilvum
           PYR-GCK]
          Length = 398

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 178/391 (45%), Gaps = 22/391 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY----KVGQENFIQSFLTEMQWMRQLTG 67
           T       GVY+H PFC  +C YCDFN++            + ++ +   E+Q      G
Sbjct: 19  TAPADRPFGVYIHVPFCATRCGYCDFNTYTPAELGAGGATPDGWLTALRAELQMAAAHLG 78

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P  +S++F GGGTPSL+    +A +LD +  ++T++ + EIT E+NP S     F G R
Sbjct: 79  EPPPVSTVFVGGGTPSLLGAAGLARVLDAVRADFTLTPDAEITTESNPESTSPRFFAGLR 138

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
            AG  R+SLG+QS     LR L R H+   A+ A   AR   F  ++ DLIY  P +T  
Sbjct: 139 AAGYTRVSLGMQSTAPHVLRALDRVHSPGRAVDAAREARAEGFDHVNLDLIYGTPGETDD 198

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                   A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L     + 
Sbjct: 199 DLLRSADAAVEAGVDHVSGYALIVEDGTALARRVRRGEIARPDDDVHARRYELLDCRLTD 258

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN S    E  HNL YW  G + G GPGAH  V            KHP ++ 
Sbjct: 259 AGFTWYEVSNWSRPDGECRHNLGYWDGGQWWGAGPGAHGYVDATRWWNV----KHPNAYA 314

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR- 364
             +      V + E + +E    E +M+  RLR G+              +     L R 
Sbjct: 315 ATLETGALPVADLEAIDAETSHVEEVMLKTRLRTGLPAATLSARERERAAVAVADGLLRA 374

Query: 365 --QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             Q F+          T RG  + D+V+ +L
Sbjct: 375 DGQSFV---------LTDRGRLLADAVVRDL 396


>gi|148653452|ref|YP_001280545.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychrobacter sp. PRwf-1]
 gi|148572536|gb|ABQ94595.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter sp.
           PRwf-1]
          Length = 418

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 203/386 (52%), Gaps = 40/386 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH----VRRYKVGQEN----------FIQSFLTEMQWMRQ 64
           L +Y+H P+CVKKCPYCDFNSH    V    +G++           ++ + + ++     
Sbjct: 12  LALYIHIPWCVKKCPYCDFNSHALPSVDTKALGRQGNSIDSDLFALYVDALIKDIDAQLP 71

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R I SIF GGGTPSL+       + D + +   +S ++E+T+EANP ++E   F+ 
Sbjct: 72  LLQNRIIRSIFIGGGTPSLLPITQYRRLFDHLKQVLPMSDDIEVTMEANPGTLEHAPFEQ 131

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y + G+NR+S+GVQS  +  L  LGR H+A++A +A   A+   F R++ DL++ LP+QT
Sbjct: 132 YLEVGINRLSMGVQSFSDSKLAALGRIHSANQAQSATQAAKKAGFKRINIDLMHGLPEQT 191

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +   +++ A      H+S YQLTIE  T+FY+       +LP ++   D+     ++ 
Sbjct: 192 LEEALYDIKMAHQAGATHISWYQLTIEPNTVFYRDTP----ILPDDDRLADIEEQGSALL 247

Query: 244 SAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +  G   YE+S   S   + S HN+NYW++GDY+ IG GAH +V VG         K   
Sbjct: 248 TELGYRNYEVSAWVSEADSGSRHNINYWQFGDYLAIGAGAHGKVTVGQQSFDQPDIKEDI 307

Query: 303 SWLKMVRKN----GHAVVEKEFLSSEQ----------QAD----EFLMMGLRLREGISVK 344
             L + +          + K++L+ E+           AD    EF++  LRL  G+ + 
Sbjct: 308 DALGITQPGIYRFSKTRLPKDYLNYEEYPKMVGCAPIAADELSGEFMLNVLRLSLGVPLT 367

Query: 345 DWEMLAG-RNLDIE-CERNLQRQGFI 368
            +    G   +DIE   R L++QG +
Sbjct: 368 LYTARTGLAAMDIEPIIRQLKQQGLL 393


>gi|315443734|ref|YP_004076613.1| coproporphyrinogen III oxidase anaerobic [Mycobacterium sp. Spyr1]
 gi|315262037|gb|ADT98778.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. Spyr1]
          Length = 398

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 177/391 (45%), Gaps = 22/391 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---- 67
           T       GVY+H PFC  +C YCDFN++              +LT ++   Q+      
Sbjct: 19  TAPADRPFGVYIHVPFCATRCGYCDFNTYTPAELGAGGATPDGWLTALRAELQMAAAHLG 78

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P  +S++F GGGTPSL+    +A +LD +  ++T++ + EIT E+NP S     F G R
Sbjct: 79  EPPPVSTVFVGGGTPSLLGAAGLARVLDAVRADFTLTPDAEITTESNPESTSPRFFAGLR 138

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
            AG  R+SLG+QS     LR L R H+   A+ A   AR   F  ++ DLIY  P +T  
Sbjct: 139 AAGYTRVSLGMQSTAPHVLRALDRVHSPGRAVDAAREARAEGFDHVNLDLIYGTPGETDD 198

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                   A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L     + 
Sbjct: 199 DLLRSADAAVEAGVDHVSGYALIVEDGTALARRVRRGEIARPDDDVHARRYELLDRRLTD 258

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN S    E  HNL YW  G + G GPGAH  V            KHP ++ 
Sbjct: 259 AGFTWYEVSNWSRPDGECRHNLGYWDGGQWWGAGPGAHGYVDA----TRWWNVKHPNAYA 314

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR- 364
             +      V + E + +E    E +M+  RLR G+              +     L R 
Sbjct: 315 ATLETGALPVADLEAIDAETSHVEEVMLKTRLRTGLPAATLSARERERAAVAVADGLLRA 374

Query: 365 --QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             Q F+          T RG  + D+V+ +L
Sbjct: 375 DGQSFV---------LTDRGRLLADAVVRDL 396


>gi|302385297|ref|YP_003821119.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           saccharolyticum WM1]
 gi|302195925|gb|ADL03496.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           saccharolyticum WM1]
          Length = 407

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 206/405 (50%), Gaps = 30/405 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +YVH PFCV+KC YCDF S     ++ Q  + +  + E+Q          + S+F G
Sbjct: 6   NLEIYVHVPFCVRKCAYCDFLSFPGNRQM-QREYTEKLIEEIQCQSAKVREYQVISVFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++  ++++ +   +   + +  + EIT+E NP +V   +   YR+AGVNRIS+G+
Sbjct: 65  GGTPSILNIEDMSAVFHALTNGFEILPDAEITMEVNPGTVTAESLSCYREAGVNRISMGL 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L +LGR H   E + +    R   F  ++ DLI A+P QT+  W+  L++   
Sbjct: 125 QSADDKELGYLGRIHTYDEFLKSYQRVRMAGFDNVNVDLISAIPGQTVESWKNTLKKVTM 184

Query: 197 YAVDHLSLYQLTIEKGTLFY-----------------KMHKDGDLV----LPSENVAVDL 235
              +H+S Y L +E+GT +Y                 K+H    L     LP E+   D+
Sbjct: 185 LKPEHISAYSLIVEEGTPYYDRYGEPVEVENHTVTQEKVHGLKSLPDLPDLPDEDAERDM 244

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
           Y LT+      G   YEISN+S  G E  HN+ YW   +Y+G+G GA S +  G      
Sbjct: 245 YYLTRDFLKEQGYERYEISNYSKKGYECRHNIGYWTGTEYLGLGLGASSYLS-GCRFHNT 303

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEF--LSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           S+ K   S      +    V+ +EF  L+ E++ +E++ +GLRL +G+S + +    G N
Sbjct: 304 SVYKEYCSARLDREEVFQEVLRQEFERLTLEEKMEEYMFLGLRLTQGVSAQGFVSSFGHN 363

Query: 354 LDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +          +++ G +E+      R T RG  + + V++   V
Sbjct: 364 IRSIYGPVLDAMEKDGLMEQND-GYYRLTSRGTDISNYVMSQFFV 407


>gi|159030192|emb|CAO91084.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 390

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/333 (35%), Positives = 173/333 (51%), Gaps = 13/333 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ-----SFLTEMQWMRQLTGPRSISSIF 75
           VY+H PFC ++C YCDF   V         F         L E   + Q TG + + +IF
Sbjct: 10  VYIHIPFCRRRCFYCDFPIFVVGNHTNPATFPPVVEYVEILQEEISLSQETG-KPLETIF 68

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + +  ILD +AK +  ++++EI++E +P++  +   QGY  AGVNR+SL
Sbjct: 69  FGGGTPSLLPVELLGAILDTLAKKFDFAADIEISMEIDPATFSLEQLQGYLSAGVNRVSL 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +E  L+  GR+H   +   A+ L R +     S DLI  LP+QT+T WE  L++A
Sbjct: 129 GVQAFQEPLLQVSGRSHTVKDIYQAVELIRGLGIVNYSLDLISGLPQQTLTDWENSLEKA 188

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +     HLS Y L +E  T F K ++ G   LP +     +Y L     +  G   YEIS
Sbjct: 189 IELQPAHLSCYDLVLEAVTPFGKQYQPGKKPLPDDETTAKMYVLASEKLALAGYQHYEIS 248

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G +  HN  YW    Y G G GA S +    H+   +  +    +   V++    
Sbjct: 249 NYAKPGYQCRHNRVYWENRPYYGFGMGAASYL----HQQRFTRPRKSRDYFAWVKEGCQI 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            VEK  L  +    E LM+GLRL  G+S+   E
Sbjct: 305 DVEKNSLIDDLL--ETLMLGLRLGSGVSLPAIE 335


>gi|237712438|ref|ZP_04542919.1| coproporphyrinogen III oxidase [Bacteroides sp. 9_1_42FAA]
 gi|229453759|gb|EEO59480.1| coproporphyrinogen III oxidase [Bacteroides sp. 9_1_42FAA]
          Length = 376

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 200/380 (52%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R  K  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTR--KEQKTAYIRALCHELTDRKDYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A    R   F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEISNHS 257
            +H+S Y L  E+GT  +K+ +   +    E+++V L+  L   +T+A G   YEISN  
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTA-GYEHYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E
Sbjct: 240 LPGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC----ERNLQRQGFIERVQF 373
            E L    + ++F++  +R + G+ +       G  L   C      +LQ QG +E ++ 
Sbjct: 295 VEELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLHMATPHLQ-QGTLE-IKN 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L+ T++G+ + D +++++
Sbjct: 353 DTLKLTRKGVFISDGIMSDM 372


>gi|302545465|ref|ZP_07297807.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302463083|gb|EFL26176.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces himastatinicus ATCC 53653]
          Length = 413

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 196/396 (49%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ +    E++  R
Sbjct: 25  LAGAAGRPLGFYLHVPYCATRCGYCDFNTYTAAELRGSGGALASRDNYAEQVAEEVRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++   EIT EANP SV+   
Sbjct: 85  KVLGDDPRPVETVFVGGGTPTLLAAADLGRMLGAIRDEFGLADGAEITTEANPESVDPRY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R+AG NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LEELREAGFNRMSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++   D Y + +
Sbjct: 205 GESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDAHADRYLIAE 264

Query: 241 SITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + SA G   YE+SN  +       HN  YWR  D+ G GPGAHS +      V     K
Sbjct: 265 EMLSAAGFAWYEVSNWATSPEGRCRHNELYWRGADWWGAGPGAHSHLG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +       +E LS E++  E +++ LRL EG  +   E+L  R       
Sbjct: 321 HPGAYAQALGEGRSPGAGRELLSDEERRVERILLELRLSEGCPL---ELL--RPAGAAAA 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
                 G +E   + + R   T +G  + D+V+ ++
Sbjct: 376 ARALEDGLLEPEPYGQGRAVLTLKGRLLADAVVRDV 411


>gi|195978320|ref|YP_002123564.1| coproporphyrinogen III oxidase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975025|gb|ACG62551.1| oxygen-independent coproporphyrinogen III oxidase 1 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 376

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 206/373 (55%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++++ + E +  +      S+ +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLEALIKEFESYQ----ISSLKTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L  + ++  +    E TIEANP  +  +     R++ VNRISLGVQ+ 
Sbjct: 63  PTAITAKQLDYLLSHLQQHLQLDQLEEFTIEANPGDLTEDKIAVLRQSAVNRISLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H  ++  A I  L    F  +S DLIYALP QTM Q +  + +ALS  +
Sbjct: 123 NDKQLKQIGRSHTEAQIYATIASLKEAGFQNISIDLIYALPGQTMQQVKENVAKALSLDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLQLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    +R  + I+     +LK V  +G+A + +E
Sbjct: 243 GFESRHNLMYWNNDEYFGCGAGASGYLNGIRYRNRVPIQH----YLKAV-ADGNARLSEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ E+  +E L +GLR + G+SV  ++   G + +       R LQ QG + + +   +
Sbjct: 298 VLTKEEMMEEELFLGLRKKSGVSVSRFQEKFGLSFESRYGSVVRELQAQGLLVKDK-DFV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 357 RMTKKGLFLGDSV 369


>gi|21674821|ref|NP_662886.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlorobium tepidum TLS]
 gi|21648040|gb|AAM73228.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlorobium tepidum TLS]
          Length = 375

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/376 (33%), Positives = 192/376 (51%), Gaps = 10/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC ++CPYCDF    R   V  E F ++   E      L   +SI +I FGGGT
Sbjct: 4   LYLHIPFCRERCPYCDFFLVTRPGFV--ERFFEALAVETAAKAALFAGQSIKAIHFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+ P  I   L  I+    +S+  EIT+EANP  +   +    +  GVNR+S+GVQS 
Sbjct: 62  PSLVPPSFIDGWLSQISGIARISAETEITLEANPEDLLPASLDALQSVGVNRLSIGVQSF 121

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++ LR LGR H+A++A   +  A   FP +S DL+     + + +WE +L+ AL     
Sbjct: 122 ADRKLRALGRAHSAADARRVVLEALERFPSVSIDLMCGAEGEMLAEWEGDLRAALDLCPQ 181

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S+Y LT+E+ T  ++  + G   LP E     +Y +   +    G   YEISN +  G
Sbjct: 182 HISIYMLTLEEKTRLWRDVRKGLRDLPGEEAQAAMYRMAAELLGNAGYGHYEISNFALEG 241

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S +NL  W    Y+G GP AHS +  G      S   +  S  + +     AV  +E 
Sbjct: 242 HHSRYNLASWMREPYLGFGPAAHSFLVDGDAETRFS---NVSSLTRYLTDPVGAVDFREV 298

Query: 321 LSSEQQADEFLMMGLRLREGISV---KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           L+  Q+ DE + + LR+R+ +SV   +    L  ++LD +    LQ +G+I  V+   + 
Sbjct: 299 LTEAQRFDEEVFLSLRIRKPLSVGFLRKGHKLGHQHLD-DILVTLQEKGWIG-VKKGTVT 356

Query: 378 CTQRGMTMLDSVIANL 393
            T+ G    D V A L
Sbjct: 357 LTEEGFLFADHVAAEL 372


>gi|329770218|ref|ZP_08261608.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           sanguinis M325]
 gi|328837024|gb|EGF86668.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           sanguinis M325]
          Length = 377

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 205/371 (55%), Gaps = 20/371 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           GVY+H PFC   C YCDFN   ++R  V  + +I   + E++ + Q++    I +I+ GG
Sbjct: 7   GVYIHIPFCKYICSYCDFNKFFIQRQPV--DKYIDCLIKEIETIEQVS---DIETIYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  +L  + K        E T EANP  +  +     ++ GV+RIS+GVQ
Sbjct: 62  GTPSALNDEQLHRLLTALRKKIPGQLR-EFTFEANPEDLVDSRVALVKEYGVDRISMGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   + L+ LGR H A++   AI+   ++    ++ DL+++LPKQTM      ++R +SY
Sbjct: 121 TFNNELLKILGRGHVANDVDMAINNCKKHGIENINVDLMFSLPKQTMEDLYDSMKRVVSY 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E+ T  Y   +D  +VLPS      +YN   +  + +G   YEISN +
Sbjct: 181 DISHVSCYSLILEQKTKLYNQVRDKKVVLPSNETEEQMYNEVINFLTENGYEQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN +YWR  +Y G+G GAH  +      +  + +   + ++  + + GHA  E
Sbjct: 241 CPGHESIHNSSYWRNIEYYGLGAGAHGYID----GIRYANQGALKFYIDSMEEKGHARRE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DIECERNLQRQGFIERVQ 372
           +  ++  +Q +E + +GLRL EG+ +  +E   G+ +     D+  ERN+   G++E V 
Sbjct: 297 ENKVTLNEQIEEEMFLGLRLLEGVDLVAFEEKYGKKVQEIFKDV-VERNIS-DGYLEIVG 354

Query: 373 FSRLRCTQRGM 383
            ++LR T++G+
Sbjct: 355 -NKLRLTRKGL 364


>gi|296170555|ref|ZP_06852139.1| coproporphyrinogen dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295894787|gb|EFG74512.1| coproporphyrinogen dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 390

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/329 (35%), Positives = 174/329 (52%), Gaps = 9/329 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
             GVY+H PFC+ +C YCDFN++       V  + ++ +  TE+Q    +L GP ++ ++
Sbjct: 20  PFGVYIHVPFCITRCGYCDFNTYTPAELGGVNPDAWLAALRTELQLAAERLAGP-TVDTV 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +A +LD + +++ ++ + EIT EANP S   + F   R AG  R+S
Sbjct: 79  FVGGGTPSLLGGARVASLLDMVREHFALAPDAEITTEANPESAWPDFFDAARAAGYTRVS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS+    L  L R H  + + AA   A +  F  +S DLIY  P ++       L  
Sbjct: 139 LGMQSVSPTVLGVLDRIHTPNRSAAAAREALDAGFEHVSLDLIYGTPGESDDDLLRSLDT 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  GL  YE+
Sbjct: 199 AVETGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSEAGLTWYEV 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN S  G E  HNL YW  G + G GPGAH  V      V     KHP ++ +M+ +   
Sbjct: 259 SNWSRPGGECRHNLGYWDGGQWWGAGPGAHGHVGA----VRWWNVKHPNAYAEMLARAAL 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            V   E L  +    E +++  RLR+G+ 
Sbjct: 315 PVGGFELLDPDALHTEVVLLKTRLRQGLP 343


>gi|238786241|ref|ZP_04630187.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia bercovieri ATCC 43970]
 gi|238712856|gb|EEQ04922.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia bercovieri ATCC 43970]
          Length = 333

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 118/331 (35%), Positives = 185/331 (55%), Gaps = 16/331 (4%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R IS+IF GGGTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F G
Sbjct: 10  LVSGREISTIFIGGGTPSLLSAEAMQQLLDGVRARLPVAFDAEITMEANPGAVEADRFSG 69

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQT 183
           Y++AG+NRIS+GVQS   + L  LGR H   EA  A  LA ++  R  + DL++ LP QT
Sbjct: 70  YQRAGINRISIGVQSFSAEKLTRLGRIHGPEEAKRAAELATSLELRSFNLDLMHGLPDQT 129

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L++A++    HLS YQLTIE  T F         +LP ++   D++     + 
Sbjct: 130 LEQALSDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLL 185

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPE 302
           SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP 
Sbjct: 186 SAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPR 245

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD---WEMLAGRNLDIECE 359
            +++     G  + ++  + +  +  EF M   RL E     D   +  LA   +  + +
Sbjct: 246 GFMQ-----GKYLDKRYEVETADRPFEFFMNRFRLLEAAPRADFYHFTGLAESTIRPQLD 300

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             L ++  IE  ++ ++  T++G   L+S++
Sbjct: 301 EALAKEYLIETEEYWQI--TEKGKLFLNSLL 329


>gi|253682679|ref|ZP_04863476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum D str. 1873]
 gi|253562391|gb|EES91843.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum D str. 1873]
          Length = 375

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 182/332 (54%), Gaps = 11/332 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N + +Y+H PFC +KC YCDF S+      G+E+ + S+   +         + + +IF
Sbjct: 2   NNDISLYIHIPFCKQKCLYCDFTSYC-----GKESQMLSYSKALSTEIDNIKDKKVKTIF 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  +   ++   I K    S ++E T+E+NP + +    +  +  GVNRIS+
Sbjct: 57  IGGGTPTYLSLEGWNILKKSIDK-LQKSEDLEFTVESNPKTFDKEKLEILKSMGVNRISI 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ + + L+ LGR H   E + + ++AR + F  ++ DL++ +P Q+  +W+  L   
Sbjct: 116 GLQAWQNKHLKALGRIHTREEFLKSYNMAREVGFENINVDLMFGIPNQSFDEWKETLNEI 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    +HLS Y L IE+ T FY ++++  + LPSE +   +Y  T       G H YEIS
Sbjct: 176 IKLNPEHLSCYSLIIEEDTPFYNLYENQKINLPSEELERKMYWYTLKFLKEKGYHQYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S    E  HNL YW   +YIG G  AHS  +   +  +  IE+    ++K++  N   
Sbjct: 236 NFSKENKECRHNLVYWNLNEYIGCGVAAHSYSQGYRYNNSGKIEE----YIKLIENNQSP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +VEK   S +   +EF+ MGLR  +GIS++++
Sbjct: 292 IVEKVRNSLKSDIEEFIFMGLRKIKGISIEEF 323


>gi|199597092|ref|ZP_03210524.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus HN001]
 gi|258508602|ref|YP_003171353.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus GG]
 gi|199591896|gb|EDY99970.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus HN001]
 gi|257148529|emb|CAR87502.1| Oxygen-independent coproporphyrinogen III oxidase [Lactobacillus
           rhamnosus GG]
 gi|259649909|dbj|BAI42071.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus GG]
          Length = 381

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 191/370 (51%), Gaps = 16/370 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G Y+H PFC   C YCDFN   + +  GQ  ++++   L EM+ +        I +++ G
Sbjct: 3   GAYIHIPFCEHICYYCDFN---KVFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIETVYVG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLG 136
           GGTP+ + PQ +A++  GI ++     + E T EANP+ +   +  Q     GVNR+S+G
Sbjct: 60  GGTPTTLTPQQLAVLCQGI-RDILHFDHGEFTFEANPNDLLTTDKLQVLYDFGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  +  L+ +GR H A +   AI  AR + F  +S DLI+ LP Q+   +   LQ+AL
Sbjct: 119 VQSFNDDVLKRIGRIHRAKDVYTAIGNARKVGFDNLSIDLIFRLPDQSRDDFLNSLQKAL 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN
Sbjct: 179 ALDLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +  HNL YW+   Y G G GA   +    +     I++    +L  +  +   V
Sbjct: 239 FAKTGYQCRHNLLYWQNDKYFGFGAGAFGYLGRDRYHNYGPIKQ----YLAPLHADHLPV 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
           +    +   +Q +E + +GLR   G++   +       +D    E    L+ QG IER Q
Sbjct: 295 LAHHLVPVSEQIEEEMFLGLRTMAGVNEDRFYSRYHMTVDAVYGETVPELESQGLIER-Q 353

Query: 373 FSRLRCTQRG 382
              +R T RG
Sbjct: 354 NGYIRLTNRG 363


>gi|260903871|ref|ZP_05912193.1| coproporphyrinogen III oxidase [Brevibacterium linens BL2]
          Length = 410

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 193/390 (49%), Gaps = 22/390 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQL---- 65
           G  +  L +YVH P+C  +C YCDFN++          ++++  +   E+    ++    
Sbjct: 23  GAAARGLSLYVHVPYCRVRCGYCDFNTYTAEDLGPGASRDDYRSNLSRELDLSVRVLAEA 82

Query: 66  -TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             G R +++IFFGGGTP+++  + +A ++D I   + ++ +VE+T EANP +++      
Sbjct: 83  GAGDREVTTIFFGGGTPTMLAAEVLAGVMDDIRDRFRLAPDVEVTTEANPDTLDPAYIAT 142

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AG  RISLG+QS     L  L R H+ ++        +     +S DLIY  P +++
Sbjct: 143 LAAAGFTRISLGMQSAVPHVLATLDRTHDPAKIPDVARWIKEAGLELSLDLIYGTPGESI 202

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L+ ALS  VDH+S Y L +E GT    M + G+L +P E+   D Y +  +  +
Sbjct: 203 DDWRRSLEVALSNDVDHISAYSLIVEPGTKMGAMVRRGELPMPDEDDLADKYEIADAAMA 262

Query: 245 AHGLHAYEISNHSFLGAESL--HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           A GLH YE+SN S   AE+   HN+ YWR  D+ G GPGAHS V      V     KHP 
Sbjct: 263 AAGLHWYEVSNWS-TSAETRCDHNMAYWRNADWWGFGPGAHSHVG----GVRFWNAKHPR 317

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           +W   +       + +E L    Q  E +M+  R+   + +    + AG    I   R  
Sbjct: 318 AWSDRLLAGESPAIGREVLDESTQEIERIMLAARIDSELPLD--SLGAGSERAI---RGF 372

Query: 363 QRQGFI--ERVQFSRLRCTQRGMTMLDSVI 390
            +QG +  + V   R   T +G  M D ++
Sbjct: 373 VKQGLLDGDAVDEGRFEPTLQGRLMADYMV 402


>gi|325478621|gb|EGC81733.1| putative coproporphyrinogen dehydrogenase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 372

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 194/370 (52%), Gaps = 13/370 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G Y+H PFC KKC YCDF +     +   + +I + + E+Q  R+     +I SI+ GG
Sbjct: 4   VGCYIHIPFCEKKCYYCDF-AAFSNLEGWIDGYIDNLIKEIQMYRK-NMDLAIDSIYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS I+ + I  I++ I K  T     E TIE NP+S+     + Y+K GV RISLGVQ
Sbjct: 62  GTPSYIDDKYIIKIVEEIKKFPTDIK--EFTIECNPNSINRKKLENYKKLGVTRISLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L+ +GRNHN+  A+  I L +     +SFDL+  LP Q     + +L+      
Sbjct: 120 SFDDKVLKNIGRNHNSQIAVNDILLIKEFGFDLSFDLMLNLPGQDFNSVKNDLEMVKKLE 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y L ++KG+LFY + + G L L   +  VD+ +         GL  YEISN S 
Sbjct: 180 PDHISWYSLILDKGSLFYNLDQKGKLKLMDTDFEVDISSFIVDELEKLGLSRYEISNFSR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES+HN  YW    Y+  G  A   +    +    +  K+     K+++   + + E 
Sbjct: 240 KNKESIHNKKYWNIDGYVSFGLAAAGFLSNTRYTNVRNFVKYD----KLIKSGKYPIAES 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           EF+SS ++  E+++  LR  EGI+++ +    G +   + ++++ +   Q F E    S 
Sbjct: 296 EFISSNEREKEYIIFKLRETEGINLEIFREKFGCDFLDKYQKSIDKFKDQDFFEIN--SH 353

Query: 376 LRCTQRGMTM 385
              T++GM +
Sbjct: 354 FSFTKKGMIL 363


>gi|238019348|ref|ZP_04599774.1| hypothetical protein VEIDISOL_01212 [Veillonella dispar ATCC 17748]
 gi|237864047|gb|EEP65337.1| hypothetical protein VEIDISOL_01212 [Veillonella dispar ATCC 17748]
          Length = 394

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 186/337 (55%), Gaps = 11/337 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQL--T 66
           N++  G   +G+YVH PFC +KC YCDF ++ +  +   E ++ + + E+  W+ +   +
Sbjct: 9   NLSALGD--MGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEIDLWVTEHPES 65

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R I +I+FGGGTP+ +  Q + +I+D I   +T++ +  +TIE+NP  V++       
Sbjct: 66  KSRPIDTIYFGGGTPTELSIQQLQMIVDKIKSTFTITDDCHMTIESNPGEVDLQYLTKLV 125

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G NRIS GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+QT+ 
Sbjct: 126 NLGFNRISFGVQTFDDKALTMLHRSHNGEKAKQAVYDAKEAGFTDINIDLIYGLPRQTLE 185

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             +  L       ++H+S Y L +E GT  Y +     + +PSE +   +Y++  +    
Sbjct: 186 DIQHNLDIVKDLPINHISTYGLQVEVGTYLYHLVDKNLISIPSETIDESMYDMMMAGLKD 245

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN S   + S HNL YW Y DY+G G GAHS    G  R   S  ++   ++
Sbjct: 246 LGFERYEISNFSKDNSYSRHNLKYWHYVDYLGFGAGAHSFYD-GVRR---SNNRNVMPYI 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           + V +     ++ E ++ E+  ++F  + LR + G++
Sbjct: 302 QAVDRYTMPTIDTETITVERAQEDFCFLALRTKWGLN 338


>gi|265752140|ref|ZP_06087933.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_33FAA]
 gi|263236932|gb|EEZ22402.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_33FAA]
          Length = 376

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 201/380 (52%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R  K  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTR--KEQKTAYIRALCHELTDRKNYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A    R   F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEISNHS 257
            +H+S Y L  E+GT  +K+ +   +    E+++V L+  L   +T+A G   YEISN  
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTA-GYEHYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E
Sbjct: 240 LPGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQF 373
            E L    + ++F++  +R + G+ +       G  L   C R    +LQ QG +E ++ 
Sbjct: 295 VEELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLRMATPHLQ-QGTLE-IKN 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L+ T++G+ + + +++++
Sbjct: 353 DTLKLTRKGVFISNGIMSDM 372


>gi|328882386|emb|CCA55625.1| putative coproporphyrinogen III oxidase [Streptomyces venezuelae
           ATCC 10712]
          Length = 410

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 191/394 (48%), Gaps = 18/394 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G G   LG Y+H P+C  +C YCDFN++      G       ++N+ +    E++  R
Sbjct: 22  LEGAGERPLGFYLHVPYCATRCGYCDFNTYTANELRGTGGVLASRDNYAEQVTEEIRLAR 81

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  +   + ++ + E+T EANP SV    
Sbjct: 82  KVLGDDPRPVRTVFVGGGTPTLLAAGDLVRMLAAVRDEFGLADDAEVTTEANPESVNPAY 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 142 LAELREGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFEHVNLDLIYGTP 201

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 202 GETDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 261

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + S  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS +      V     K
Sbjct: 262 DVLSRSGFDWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHMG----GVRWWNVK 317

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   +         +E LS E +  E +++ LRL+EG+ +   +            
Sbjct: 318 HPGAYAAALAGGKSPGAGRELLSDEDRRVERILLELRLKEGVELSLLKPAGLAAAAKALT 377

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             L   G  E     R   T RG  + D+V+ +L
Sbjct: 378 DGLLAPGPYE---TGRAVLTLRGRLLADAVVRDL 408


>gi|218441365|ref|YP_002379694.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 7424]
 gi|218174093|gb|ACK72826.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7424]
          Length = 435

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 190/370 (51%), Gaps = 14/370 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQL 65
           T  G      Y+H PFC ++C YCDF   V   K         +N+++    E+     L
Sbjct: 19  TVNGGVPRSAYIHIPFCRRRCYYCDFPISVLGNKTDINTSAMIKNYVEVLCQEICATPAL 78

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
             P  + ++FFGGGTPSL+    +  IL  +++++ ++S  EI++E +P +   +  QGY
Sbjct: 79  GQP--LETVFFGGGTPSLLPVPYLKQILTVLSQHFGITSEAEISLEIDPGTFTEDQLQGY 136

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
            +AGVNR+SLGVQS +++ L+  GR H   +   A+ + R +  P  S DLI  LP QT+
Sbjct: 137 LQAGVNRVSLGVQSFDDRLLQICGRFHTQKDIFTAVDVIRRLEVPNFSLDLISGLPHQTL 196

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            QW+  L +A+  A +HLS Y L +E  T F K ++ G+  LPS+ +   +Y   Q   +
Sbjct: 197 EQWQYSLTQAIIIAPNHLSCYDLVLEPVTAFGKFYQPGEKPLPSDEMTAKMYRTAQQFLT 256

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G + YE+SN+   G +  HN  YW    Y G G GA S V +       +  ++  +W
Sbjct: 257 QAGFNHYEVSNYGQPGYQCRHNRVYWENRAYYGFGMGAASYVNLQRFTRPKTRREY-YTW 315

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE--RN 361
           ++ +  +    ++     S  Q  E LM+GLRL EG+ +       G   L+  C+    
Sbjct: 316 VEQL-IDSQGKIDCSPTPSGDQLLETLMLGLRLAEGVDLSVLTQQYGEAILNAICQSLSP 374

Query: 362 LQRQGFIERV 371
             RQG+IE +
Sbjct: 375 YSRQGWIEGI 384


>gi|320096044|ref|ZP_08027647.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977023|gb|EFW08763.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 407

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 170/358 (47%), Gaps = 29/358 (8%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLT---- 66
           G     L +YVH PFC  +C YCDFN++  ++  G +   +  S L E     ++     
Sbjct: 22  GDAGRPLSLYVHVPFCRVRCGYCDFNTYTAQFGAGADLDTYAGSVLAEAALATRVLDGAG 81

Query: 67  -GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            GPR  S++FFGGGTP+++ P  +A  LDG+ +   ++   E+T+EANP +V      G 
Sbjct: 82  FGPRPASTVFFGGGTPTMLAPGELARALDGLRERIGIAPGAEVTLEANPDTVSARGLAGL 141

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
             AG  R+S G+QS   + L  L R H       A+  AR     +S DLIY  P +T+ 
Sbjct: 142 ADAGFTRVSFGMQSAVPRVLAALDRTHAPERVPEAVAWAREAGLDVSVDLIYGCPGETLD 201

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   L  A     DH+S Y L +E+GT        G+L  P  +     Y    ++ SA
Sbjct: 202 DWRASLLAATRMRPDHISAYALVVEEGTRMGAQVARGELPAPDPDDEAAKYEEADAVLSA 261

Query: 246 HGLHAYEISNHSFLGAE------------------SLHNLNYWRYGDYIGIGPGAHSRVK 287
            G   YEISN + +G +                  S HNL YWR  D+ G+GPGAHS   
Sbjct: 262 AGYRWYEISNFALVGPDEAGALDRGALAPTALARASRHNLAYWRDWDWWGLGPGAHS--H 319

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +G+ R      KHP ++   + +        E L +  +  E +M+ +R   G+++ D
Sbjct: 320 IGALR--WWNVKHPAAYASRLARGLSPAHSGEALDAPTRDLERVMLAVRTGGGVALAD 375


>gi|254382706|ref|ZP_04998063.1| coproporphyrinogen III oxidase [Streptomyces sp. Mg1]
 gi|194341608|gb|EDX22574.1| coproporphyrinogen III oxidase [Streptomyces sp. Mg1]
          Length = 416

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 176/341 (51%), Gaps = 15/341 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G G   LG Y+H P+C  +C YCDFN++      G       +EN+  + + E++  R
Sbjct: 28  LAGAGDRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRENYADTLIDEVRLAR 87

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + E+T EANP SV+   
Sbjct: 88  KVLGDDPRPVRTVFVGGGTPTLLPAGDLVRMLAAIRDEFGLAEDAEVTTEANPESVDPRY 147

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R  G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 148 LEELRAGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFEHVNLDLIYGTP 207

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +  
Sbjct: 208 GESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAD 267

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           S+ +  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 268 SVMAEAGYSWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 323

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           HP ++   +         +E LS+E +  E +++ LRL +G
Sbjct: 324 HPGAYAAALAAGRSPGAGRELLSAEDRRVERILLELRLVDG 364


>gi|294793681|ref|ZP_06758818.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 3_1_44]
 gi|294455251|gb|EFG23623.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 3_1_44]
          Length = 394

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 188/334 (56%), Gaps = 9/334 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQL--TGPRSISSI 74
            +G+YVH PFC +KC YCDF ++ +  K   E ++ + + E+  W+ +   +  ++I +I
Sbjct: 15  DMGLYVHIPFCKQKCMYCDFPAY-QNLKDYYETYVYALVQEIDLWVSEHPESTSKAIDTI 73

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP+ +  Q++ +ILD I   +T++ +  +TIE+NP  V ++      K G NRIS
Sbjct: 74  YFGGGTPTELSIQHLQMILDKIKNTFTITDDCHMTIESNPGEVNLHYLTKLVKFGFNRIS 133

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+Q++   +  L  
Sbjct: 134 FGVQTFDDKALTMLHRSHNGEQAKQAVYDAKEAGFADINIDLIYGLPRQSLDDIKRNLAV 193

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                ++H+S Y L +E GT  Y + +   + +PSE++   +Y+   +     G   YEI
Sbjct: 194 VEELPINHISTYGLQVEVGTYLYHLVQKNLIFIPSESIDESMYDTMMAGLKELGFERYEI 253

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +   + S HNL YW Y DY+G G GAHS    G  R   S  ++   +++ V +   
Sbjct: 254 SNFAKANSYSRHNLKYWHYIDYLGFGAGAHSFYD-GVRR---SNNRNVMPYIQSVDRYIM 309

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             ++ E ++ E+  ++F  + LR + G+  + +E
Sbjct: 310 PTIDTETITLERAQEDFSFLALRTKWGLDEQKFE 343


>gi|257894311|ref|ZP_05673964.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,408]
 gi|257830690|gb|EEV57297.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,408]
          Length = 383

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +  R+  T RG  + ++V 
Sbjct: 361 VNEE-DRVYLTPRGTFLGNNVF 381


>gi|313892565|ref|ZP_07826152.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister microaerophilus UPII 345-E]
 gi|313118962|gb|EFR42167.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister microaerophilus UPII 345-E]
          Length = 378

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 183/332 (55%), Gaps = 16/332 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSIS 72
           + +LG+Y+H PFC  +C YC+F      Y +G    + F+++   E++        +   
Sbjct: 2   TENLGLYLHIPFCKSRCSYCNF------YSIGMKADDKFVKALEKEIELKSCNYKNKICD 55

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+FGGGTPS +    +  I+  + +++ +S N EIT+E NP  +        RK G+NR
Sbjct: 56  TIYFGGGTPSTLSSIQVESIMKKLFRHFNISKNAEITMELNPCDMTKEYLASIRKIGINR 115

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+Q+  +  L  +GR H A +A  AI+ A+   F  +S DL+Y LP QT   ++  L
Sbjct: 116 ISVGIQTNYDSLLLKIGRLHTAKQAEKAIYQAKKEGFSNISIDLMYELPMQTSKDFKNTL 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   + H+S+Y L IE+GT F +++K G L  PSE  + ++Y     I   +G   Y
Sbjct: 176 LWAVHLPIRHMSIYSLIIEEGTRFSQLYKKGLLNRPSEEASWEMYQSMCRILPHYGFERY 235

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EIS+ +  G +S HN+ YW+  DY+G+GP A SR+K         +  + +  L     +
Sbjct: 236 EISSFAQKGYKSEHNMKYWKLDDYLGLGPAACSRIKHERRENLPGVRLYQKQLL-----S 290

Query: 312 GHAVVEKEF-LSSEQQADEFLMMGLRLREGIS 342
           G    EK + LS E++ +EF  + LR++EGI+
Sbjct: 291 GENPPEKIYKLSVEEEMEEFCFLQLRMKEGIN 322


>gi|224501584|ref|ZP_03669891.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL R2-561]
          Length = 385

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 188/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP   + ++
Sbjct: 11  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTVAKGPIAPVDTV 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS
Sbjct: 67  FVGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   ++  L++
Sbjct: 127 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LPS++   ++Y+L  +    HG   YEI
Sbjct: 187 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPSQDAEANMYDLLLNEMEKHGRKQYEI 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N  
Sbjct: 247 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENIL 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 303 PTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 353


>gi|294618180|ref|ZP_06697769.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1679]
 gi|291595555|gb|EFF26859.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1679]
          Length = 388

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +  R+  T RG  + ++V 
Sbjct: 361 VNEE-DRVYLTPRGTFLGNNVF 381


>gi|290894236|ref|ZP_06557205.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J2-071]
 gi|290556233|gb|EFD89778.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J2-071]
          Length = 385

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 191/358 (53%), Gaps = 13/358 (3%)

Query: 12  TGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           T   SN S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP
Sbjct: 4   TNHSSNESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKGP 59

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  + 
Sbjct: 60  IAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQD 119

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   
Sbjct: 120 HGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEAD 179

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L++AL   + H S Y L IE  T+FY + + G L LPS++   ++Y+L  +    H
Sbjct: 180 FQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPSQDAEANMYDLLLNEMEKH 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++
Sbjct: 240 GRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YME 295

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            ++KN     +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 296 PLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDTTFANAIQK 353


>gi|225027588|ref|ZP_03716780.1| hypothetical protein EUBHAL_01845 [Eubacterium hallii DSM 3353]
 gi|224955104|gb|EEG36313.1| hypothetical protein EUBHAL_01845 [Eubacterium hallii DSM 3353]
          Length = 385

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 191/340 (56%), Gaps = 21/340 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSI 74
             L +Y+H PFC+KKC YCDF S     +  +E ++QS + E++   +L      ++ SI
Sbjct: 6   TDLELYIHIPFCIKKCNYCDFLSFPSN-EERREIYVQSLINEIEQTGKLLDKDAYAVRSI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+  + I  I+  +   + +    EIT+E NP ++   N   Y+KAGVNR S
Sbjct: 65  FIGGGTPSLLSGKQIERIMLAVRNAFFIMEEAEITMETNPGTLTKENVFSYKKAGVNRFS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS ++  L  LGR H   E + +  LAR   F  ++ DL+  LP QT++ +   L++
Sbjct: 125 MGLQSADDACLHLLGRIHTWEEFLKSYELARKAGFENINVDLMSGLPGQTVSIYRRTLEK 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++   +H+S Y L +E+GT F +  ++    +P E    ++Y LT+ + + +G   YEI
Sbjct: 185 VMALQPEHISAYSLILEEGTPFGE-SEEIQKKIPDEETDREMYQLTKEVLAENGYERYEI 243

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK------M 307
           SN++  G E +HNL YW    Y+G G GA S  + G+     S EK+ E + K      M
Sbjct: 244 SNYARKGKECIHNLGYWSGIPYLGFGLGASSYFE-GTR---FSNEKNLEEYQKKPYVPFM 299

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           +R++   + EK+      + +EF+ +GLR R GIS ++++
Sbjct: 300 MREDYTVLSEKD------EIEEFMFLGLRKRAGISEREFK 333


>gi|46907704|ref|YP_014093.1| coproporphyrinogen III oxidase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093483|ref|ZP_00231246.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 4b H7858]
 gi|254824465|ref|ZP_05229466.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-194]
 gi|254932661|ref|ZP_05266020.1| coproporphyrinogen III oxidase [Listeria monocytogenes HPB2262]
 gi|254991904|ref|ZP_05274094.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J2-064]
 gi|46880973|gb|AAT04270.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018159|gb|EAL08929.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 4b H7858]
 gi|293584220|gb|EFF96252.1| coproporphyrinogen III oxidase [Listeria monocytogenes HPB2262]
 gi|293593702|gb|EFG01463.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-194]
 gi|332311918|gb|EGJ25013.1| Oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes str. Scott A]
          Length = 385

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 188/359 (52%), Gaps = 12/359 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
           N       S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    G
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKG 58

Query: 68  P-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           P   + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +
Sbjct: 59  PIAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQ 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             GVNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT  
Sbjct: 119 DHGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEA 178

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++  L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    
Sbjct: 179 DFQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEK 238

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           HG   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    ++
Sbjct: 239 HGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YM 294

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           + ++KN     +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 295 EPLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 353


>gi|212703994|ref|ZP_03312122.1| hypothetical protein DESPIG_02047 [Desulfovibrio piger ATCC 29098]
 gi|212672587|gb|EEB33070.1| hypothetical protein DESPIG_02047 [Desulfovibrio piger ATCC 29098]
          Length = 388

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 204/388 (52%), Gaps = 26/388 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGPRSI 71
           VY+H PFC  +C YC F+S      +G  +         +    L E+       G R +
Sbjct: 3   VYIHVPFCRSRCRYCAFHS----LPLGPASPDASPRVAAYRDHLLRELDLWATRLGRRPV 58

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGV 130
            S+FFGGGTPSL+ P   A +L+ I +++ +++  EI++EANP S+       GY  AG+
Sbjct: 59  ESVFFGGGTPSLLPPDFQAAVLERIDRHFHLAAGAEISMEANPESLLARRAVDGYLAAGI 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NRIS+GVQS++++ L  LGR H  ++ + A+ HL       +  DL++ LP Q    W  
Sbjct: 119 NRISMGVQSMDDRFLSLLGRPHRRADVLRAVEHLRAAGCRNLGLDLMWGLPGQDAAHWLS 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ AL+   +H+S Y LT+E+GT   +    G L LP ++    +Y     + +AHGL 
Sbjct: 179 TLEDALALEPEHVSAYGLTLEEGTPLERDWSAGRLSLPEDDEQERMYLEGIRLLAAHGLE 238

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G  S HN+ YW   DY+G+GP A S ++    R   + ++    W   + 
Sbjct: 239 QYEISNYARPGFFSRHNMGYWTGADYLGLGPAATSTLE--GRRWTDTPDQ--ARWQADI- 293

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE----CERNLQRQ 365
             G    + E ++   + +E LM+ LR   G  + ++  L+GR+   +    C R L   
Sbjct: 294 DAGRPDHDAEAITPRIRLEERLMLSLRTCAGFGLAEYTSLSGRDFLADHGGWC-RELVAA 352

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G + R+   RL  T +G+ + ++V+A+L
Sbjct: 353 G-LARLDGDRLALTPQGLLVSNAVVADL 379


>gi|56807717|ref|ZP_00365588.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Streptococcus pyogenes M49 591]
 gi|209559352|ref|YP_002285824.1| coproporphyrinogen III oxidase [Streptococcus pyogenes NZ131]
 gi|209540553|gb|ACI61129.1| Coproporphyrinogen III oxidase, oxygen- independent [Streptococcus
           pyogenes NZ131]
          Length = 398

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 204/374 (54%), Gaps = 17/374 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 30  AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 84

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 85  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 144

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 145 NNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 204

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 205 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 264

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 265 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 319

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE----RNLQRQGFIERVQFSR 375
            L  E+  +E L +GLR + G+S++ ++   G + + EC     R LQ QG + +   + 
Sbjct: 320 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFE-ECYGNIVRELQNQGLLVKDD-AF 377

Query: 376 LRCTQRGMTMLDSV 389
           +R T++G+ + DSV
Sbjct: 378 VRMTKKGLFLGDSV 391


>gi|68535671|ref|YP_250376.1| coproporphyrinogen III oxidase [Corynebacterium jeikeium K411]
 gi|68263270|emb|CAI36758.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           jeikeium K411]
          Length = 409

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 201/410 (49%), Gaps = 41/410 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTG-----P 68
           G+Y+H PFC  +C YCDFN++  +     +      N I  +L  ++   ++       P
Sbjct: 3   GLYIHVPFCSTRCGYCDFNTYTPQELSAADGGAVEGNTIPGYLDALERELEVAAEVWDYP 62

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPS++  + +A  L+   +   +++N E+T EANP S     F G R+A
Sbjct: 63  GEVQTVFFGGGTPSMLGHEGLARALNAARRTVGLAANAEVTTEANPESTSPEFFAGLREA 122

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
           G NRISLG+QS     L+ L R H     I A   A R  F  ++ D+IY  P +T    
Sbjct: 123 GFNRISLGMQSAMGHVLKVLERQHTPGRPIEATREAKRAGFEHINLDVIYGTPTETDDDL 182

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   L   VDH+S Y L +E GT   +  + G+L  P E+   D Y+   +     G
Sbjct: 183 RRTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDTLADRYDAIDARLRDAG 242

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------GSHRVAISIEKHP 301
            + YE+SN +  G E  HNL YWR G + G GPGAH  V++       S  V +   K P
Sbjct: 243 FNWYEVSNWAKPGGECQHNLIYWRSGQWWGAGPGAHGCVRLRGEGHSESGLVRLVNAKRP 302

Query: 302 ES-WLKMV--------RKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            + W  ++         K+G     +VV  E L+++    E +M+ LRL EG+       
Sbjct: 303 ATYWDGLLGEAEGASTGKDGLPVPGSVVTTERLTNDDLRTEQVMLQLRLAEGLK------ 356

Query: 349 LAGRNLDIECERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           L G + + E  + ++R    G +++    RLR T +G  + D ++ ++ +
Sbjct: 357 LVGSDENAELAQVIERYTGLGLLDK-HGERLRLTDKGRYLADGIVTDIVL 405


>gi|171779991|ref|ZP_02920895.1| hypothetical protein STRINF_01778 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281339|gb|EDT46774.1| hypothetical protein STRINF_01778 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 376

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 208/376 (55%), Gaps = 21/376 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF+    + +   E ++Q+ + E +        + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPVDE-YLQALIREFESY----DIKKLRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + K+  +S   E TIEANP  +  +  +  + + VNR+SLGVQ+  
Sbjct: 64  TSITAEQLEYLLTNLTKHLDLSVLEEFTIEANPGDLTEDKIEVLKHSAVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++  + I +L    F  +S DLIYALP QTM   +  + +A++  + 
Sbjct: 124 DKHLKQIGRSHNEAQIYSTISNLKEAGFHNISIDLIYALPGQTMEDVKENVAKAIALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLQLPKEDLEAEMFEYIISELEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E 
Sbjct: 244 FESRHNLMYWDNAEYFGVGAGASGYLNGVRYRNRGPI----QHYLKAVAQ-GNARLSEEK 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI---ERVQFS 374
           L+ ++  +E L +GLR + G+S+  +E   G + +    +  R L +QG +   ++V   
Sbjct: 299 LTKDEMMEEELFLGLRKKTGVSIARFEEKFGLSFEERYGQIVRELCQQGLLVPDDKV--- 355

Query: 375 RLRCTQRGMTMLDSVI 390
            +R T++G+ + D+V+
Sbjct: 356 -VRMTKKGLFLGDTVV 370


>gi|158334462|ref|YP_001515634.1| coproporphyrinogen III oxidase [Acaryochloris marina MBIC11017]
 gi|158304703|gb|ABW26320.1| oxygen-independent coproporphyrinogen III oxidase [Acaryochloris
           marina MBIC11017]
          Length = 404

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/360 (34%), Positives = 189/360 (52%), Gaps = 16/360 (4%)

Query: 21  VYVHWPFCVKKCPYCDFN-SHVRRYKVGQENF-IQSFLTEMQWMRQLT--GPRSISSIFF 76
            Y+H PFC ++C YCDF  S +  +K G+ +  I  ++  +    ++T  GPR + ++FF
Sbjct: 17  AYIHIPFCRRRCFYCDFPISVIGDHKRGETSLAIADYVNLLCQEIEITASGPRPLKTLFF 76

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  Q +  IL  + + + +  ++E++IE +P +      + ++  G+ R+SLG
Sbjct: 77  GGGTPSLLSAQQLEQILRCLEQQFGLEPDIEVSIEMDPGTFSWPLMRQFKALGITRVSLG 136

Query: 137 VQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           VQ+  E+ L+  GR+H  ++   AIA +H A         DLI  LP QT+ QW+  L+ 
Sbjct: 137 VQAFSEELLQACGRSHTVADIGDAIAILHQAG--ITNFGLDLISGLPNQTLDQWQASLEA 194

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+    HLS Y L IE  T+F K ++ G   LPS+ +A  +Y L  +  +A G   YEI
Sbjct: 195 ALALEPTHLSTYDLVIEPTTVFGKKYQPGIQPLPSDEIAAQMYRLAVATLTAAGYDHYEI 254

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNG 312
           SN++  G    HN  YWR   Y G G GA S V  G         K    W+K ++   G
Sbjct: 255 SNYARPGYTCRHNQVYWRNNPYYGFGMGATSYVH-GQRVSRPRTRKAYADWVKRLIAAQG 313

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
              +     S      E LMMGLRL  G+S+   + LA     N  ++C    Q+QG+++
Sbjct: 314 Q--MNDAVSSDLDILLETLMMGLRLSTGVSLSTLQDLASPQIVNTLLQCLAPYQKQGWVQ 371


>gi|254881409|ref|ZP_05254119.1| coproporphyrinogen III oxidase [Bacteroides sp. 4_3_47FAA]
 gi|319642796|ref|ZP_07997434.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_1_40A]
 gi|254834202|gb|EET14511.1| coproporphyrinogen III oxidase [Bacteroides sp. 4_3_47FAA]
 gi|317385540|gb|EFV66481.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_1_40A]
          Length = 376

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 203/378 (53%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S  +  +  +  +I +  +E++  ++  G  +I +I++GGG
Sbjct: 3   GIYLHVPFCKRRCIYCDFFSTTQSER--KTAYIHAVCSELEMRKEYLGGETIETIYWGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I   + KN+++SS+ EIT+EANP  +  +     R    NR+S+G+Q+
Sbjct: 61  TPSQLDKEDFETIFYYLHKNYSISSHPEITLEANPDDLTPDYIAMLRTLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L+ L R H A +AI A    R   F  +S DL+Y LP +T++ W+ +L +AL   
Sbjct: 121 FNESILKVLQRRHTARQAIEAFQNCRAAGFQNISIDLMYGLPGETLSTWQQDLDQALLLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L  E+ T+ +K+ +   +    E+++V L++      ++ G   YEISN S 
Sbjct: 181 PEHLSAYHLIYEEDTVLWKLREQHKVEEADEDLSVSLFSTLIDRLTSEGYDHYEISNFSL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   V       S+    ++++K +   G  V E 
Sbjct: 241 PGLYSRHNSSYWTEKKYLGCGPSAHSYNGVSRQWNVASL----DTYIKGISA-GTPVFEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++  +R   G+ +       G  L   C R      +QG +E V    
Sbjct: 296 EELDLYTRYNDFVITRIRTEWGMPLSKLRDEFGEKLYDYCLRMAAPHLKQGTLELVN-DI 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           L+ T++G+ + D +++++
Sbjct: 355 LKLTRKGIFISDGIMSDM 372


>gi|239626113|ref|ZP_04669144.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520343|gb|EEQ60209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 413

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 196/379 (51%), Gaps = 43/379 (11%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT +    + +YVH PFC +KC YCDF S  R      E +    + E++          
Sbjct: 1   MTSKNKKPMELYVHIPFCARKCLYCDFLS-FRALASVHEAYTAQLIREIEAQGAFCREYQ 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +++IF GGGTPS++EP  IA I+  +  ++ V+ + EITIE NP ++  N    YR+AG+
Sbjct: 60  VTTIFIGGGTPSVMEPCLIADIMRALKYHFDVAEDAEITIEVNPGTLLYNKLHIYREAGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS + + LR LGR H   E + +   AR + F  ++ DL+ ++P QT+  ++ 
Sbjct: 120 NRLSIGLQSTDNRELRDLGRIHTFEEFLKSFQCARMVGFSNINVDLMSSIPGQTLESFKN 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK---------------------MHKDGDLV--L 226
            L++      +H+S Y L IE+GT F+                      M  DG     L
Sbjct: 180 TLKKVAMLKPEHISAYSLIIEEGTPFWDHYGQGAAGGWRSAGQDGKEHPMAADGPAFPPL 239

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E+    +Y+LT++  +  G   YEISN++  G E  HN+ YW    Y+G+G GA S  
Sbjct: 240 PDEDTESRIYHLTRTFLTEQGYGRYEISNYAKPGHECRHNIGYWTEVPYLGLGLGASSY- 298

Query: 287 KVGSHR----------VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
            +G  R          + +   + PE  L+ +    H  +++  LS E + +EF+ +GLR
Sbjct: 299 -LGGCRFSNTSDLDMYLGLDFNRAPEEVLEQL----HGPLQE--LSREARMEEFMFLGLR 351

Query: 337 LREGISVKDWEMLAGRNLD 355
           L +G+S  D+  + G  L+
Sbjct: 352 LTKGVSGIDFVSMFGIKLE 370


>gi|304403919|ref|ZP_07385581.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           curdlanolyticus YK9]
 gi|304346897|gb|EFM12729.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           curdlanolyticus YK9]
          Length = 389

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 199/380 (52%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YCDFNS V +   GQ  + ++ +   EM+   +   P  I ++F GG
Sbjct: 9   LYIHIPFCTNKCHYCDFNSFVLK---GQPVDAYLDALEHEMRLTVEAMPPVVIDTVFVGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++ P  +   L  + +++ ++++VE T+EANP + + +        GVNRIS GVQ
Sbjct: 66  GTPTVLTPPQMERFLASVRRHFPLAADVEFTMEANPGTTDSDKLAAMYAGGVNRISFGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  +GR HN  +   +I  A+   F  +S DL++ LPKQT+      + +AL  
Sbjct: 126 SFNNDLLAGIGRIHNIDDVYRSIDNAKKAGFTNLSIDLMFGLPKQTVELLTDSVDKALQL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H SLY L +E+ TLF+K+++  +L LP+E   + ++ +  +     G   YEISN +
Sbjct: 186 GLTHYSLYSLKVEENTLFHKLYERNELPLPTEEEELAMFMVVMNKLKEAGYRHYEISNFA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YWR   Y G+G GAH   +   H     ++   ++ L  + +     +E
Sbjct: 246 IPGLESRHNSTYWRNEPYYGLGAGAHGYARGERHLNIKGVQPFIDAALARLPR-----LE 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWE------MLAGRNLDIECERNLQRQGFIERV 371
              +S  +  ++F+M+GLRL EG+    +E       + G    I  ER L R+G +E  
Sbjct: 301 TTPISEAEAMEDFMMVGLRLLEGVRGAAFEAQFPSHTMEGVFGGI-LER-LVREGLLETT 358

Query: 372 QFSRLRCTQRGMTMLDSVIA 391
                R T+RG+ + + V  
Sbjct: 359 PERGYRLTERGIPLGNEVFG 378


>gi|125973840|ref|YP_001037750.1| coproporphyrinogen III oxidase, anaerobic [Clostridium thermocellum
           ATCC 27405]
 gi|256004292|ref|ZP_05429274.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum DSM 2360]
 gi|281418000|ref|ZP_06249020.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum JW20]
 gi|125714065|gb|ABN52557.1| coproporphyrinogen III oxidase, anaerobic [Clostridium thermocellum
           ATCC 27405]
 gi|255991726|gb|EEU01826.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum DSM 2360]
 gi|281409402|gb|EFB39660.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum JW20]
 gi|316939964|gb|ADU73998.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum DSM 1313]
          Length = 380

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 193/375 (51%), Gaps = 18/375 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSI 74
           LG+Y+H PFC  KC YCDFNS   R     ++F+ ++      E+     +     I ++
Sbjct: 7   LGLYIHVPFCKAKCFYCDFNSFACR-----DDFVPAYFNALKKEISAYSDIIKGYRIKTV 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPS +   NI  I+  + + + +    E+TIEANP +++      YR AG+NR+S
Sbjct: 62  FFGGGTPSYVGAHNIYEIVSLLKQKFDMDGCFELTIEANPGTLDEEKLLVYRDAGINRLS 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+Q+ +   L  LGR H   E     HLA +  F  ++ DLI+A+P Q+   W   + +
Sbjct: 122 IGLQAWQNHLLESLGRIHTVEEFEENYHLAVKTGFDNINVDLIFAIPGQSFEDWAETINK 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  H+S Y L IE+ T+F      G+L    + +   +Y          G   YEI
Sbjct: 182 VAELNPRHISCYSLIIEEDTVFGAKFSKGELSSVEDELDRKMYWYAVEKLRTVGYKHYEI 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN S  G E  HNL YW+  +YIG G GAHS           +IE+    ++K++     
Sbjct: 242 SNFSKEGFECAHNLIYWKEQEYIGFGAGAHSYFNGQRFNNTYNIEE----YVKIINSGRL 297

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE--RNLQRQGFIER 370
            V  K  +  + +  EF+M+GLRL EG+S++++    G N L++  E  +NL ++G +  
Sbjct: 298 PVENKIAIGRKDEISEFMMLGLRLVEGVSIREFYERFGENVLEVFKEQIKNLSKRGLV-A 356

Query: 371 VQFSRLRCTQRGMTM 385
           V+   ++ T+ G+ +
Sbjct: 357 VENGFIKLTRLGLDL 371


>gi|227495933|ref|ZP_03926244.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           urogenitalis DSM 15434]
 gi|226834521|gb|EEH66904.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           urogenitalis DSM 15434]
          Length = 426

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 188/393 (47%), Gaps = 27/393 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQW----MRQLTGPRSIS- 72
           VY+H P+C  +C YCDFN++      G     +++ +   E++     M +   PR ++ 
Sbjct: 39  VYLHVPYCRVRCGYCDFNTYTNLEMGGGASAADYVTTLAGELRLAAAAMERAGLPRRMAQ 98

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTP+++   ++A +L+ +   W ++   E+T EANP +V+        +AG  R
Sbjct: 99  TVFLGGGTPTMLPAADLAAMLELVRTTWGLAEGAEVTTEANPETVDERYLATLAEAGFTR 158

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS   Q L  L R+H        +  AR      S DLIY  P +++  W   L+
Sbjct: 159 VSFGMQSAVPQVLATLERSHTPQRVPQVVAWARRSGLETSLDLIYGTPGESVQDWARSLE 218

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+    DHLS Y L IE+GT  +   + G+L +P+++     Y +  ++ +  G   YE
Sbjct: 219 AAVEIGPDHLSAYALVIEEGTRMWTQVRRGELEMPADDDEATKYEMADAVLAEAGYEWYE 278

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G E  HN  YWR  D+ G GPGAHS        V +   K P +W   VR   
Sbjct: 279 ISNWARPGHECRHNEAYWRDWDWYGAGPGAHSHFG----DVRMWDTKAPVAWAAQVRAGR 334

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-------- 364
             V   E +    +  E +M+G+RLREG+   D   LA    +   +   +R        
Sbjct: 335 LPVAGHEVIDDGARELERVMLGIRLREGL---DLAGLARPGEETTADGTPRRLVPVVGAL 391

Query: 365 --QGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
             QG +E     R R   T RG  M D+V   L
Sbjct: 392 MSQGLLEPAAALRGRAVLTLRGRLMADTVTGRL 424


>gi|315650267|ref|ZP_07903339.1| coproporphyrinogen dehydrogenase [Eubacterium saburreum DSM 3986]
 gi|315487378|gb|EFU77688.1| coproporphyrinogen dehydrogenase [Eubacterium saburreum DSM 3986]
          Length = 385

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 203/380 (53%), Gaps = 8/380 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC +KC YCDF S        +  ++     E++   +      +SSIF GG
Sbjct: 6   LELYVHIPFCERKCEYCDFLSFSAD-DGEKRAYVAQLADEIRAQGENYRDYLVSSIFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I  I++ + +++ V+++ EITIE NP ++  +     +KAG+NRIS G+Q
Sbjct: 65  GTPTTLSGIWILEIMNTVRESFIVATDAEITIECNPGTLSKSKIMHIKKAGINRISFGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E+ L+ LGR H     + +  LAR   F  ++ DL+  LP QT+  ++  L+R    
Sbjct: 125 SSIEEELKALGRIHTYKGFLQSYQLAREFGFTNINVDLMSGLPYQTIDSYKTTLKRVCEL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD--LVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +H+S Y L IE GT F+  +  G+   +LP EN    +Y +T+++   HG   YEISN
Sbjct: 185 KPEHISAYSLIIEPGTPFFDKYGSGEETALLPDENEDRSMYAITKAVLKEHGYERYEISN 244

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN+ YW    Y+G+G GA   V      V    +K+    +KM +      
Sbjct: 245 YAKPGRECRHNIGYWTGVSYLGLGVGASGYVMNRRFHVEGDYKKYMN--IKMQQDITPLY 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            + E L ++   +EF+ +GLRL  G+S  ++    G ++    +R ++R   ++ ++++ 
Sbjct: 303 CDIEELDTKANMEEFMFLGLRLIRGVSRHEFNEKFGVDMFEVYDRQIKRNIMLKLMEYNS 362

Query: 376 --LRCTQRGMTMLDSVIANL 393
             LR T +G+ + + V+++ 
Sbjct: 363 PYLRLTDKGLDLSNMVMSDF 382


>gi|257878503|ref|ZP_05658156.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,230,933]
 gi|257812731|gb|EEV41489.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,230,933]
          Length = 381

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 174/335 (51%), Gaps = 10/335 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              V+E+E L+ + Q +E + +GLR + GI+ K +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHF 335


>gi|332686760|ref|YP_004456534.1| putative coproporphyrinogen III oxidase [Melissococcus plutonius
           ATCC 35311]
 gi|332370769|dbj|BAK21725.1| putative coproporphyrinogen III oxidase of BSHemN-type,
           oxygen-independent, in heatshock gene cluster
           [Melissococcus plutonius ATCC 35311]
          Length = 384

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 179/328 (54%), Gaps = 11/328 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG 79
           Y+H PFC   C YCDFN  + + +   + +++S L E++    +TG  S  + +++ GGG
Sbjct: 13  YIHIPFCEHICYYCDFNKVLIKEQ-PVDRYLESLLKEIEL---VTGNVSCELETLYIGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +L GI K +T S+ +E T+EANP  +     Q  +  GVNR+S+GVQS
Sbjct: 69  TPSALSSKQLDYLLSGIIKQFTFSNTIEFTVEANPGDLTPEKIQIMKNYGVNRLSMGVQS 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + Q L+ +GR H   E   AI  L +  F  +S DLIYALP QT+  ++  L +A+   
Sbjct: 129 FDNQILKKIGRKHTVKEIYQAIQRLEKANFNNISIDLIYALPGQTLENFKESLCKAIELN 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H +LY L +E  T+F  + + G +  PSE++ V +      +    G   YEISN + 
Sbjct: 189 LPHYALYSLILENQTMFMNLARQGKIHFPSEDIEVSMLKSAIQLMEEAGRRHYEISNFAI 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW    Y G G GA   +    ++    I    + +L  +  N   ++E+
Sbjct: 249 PGKESRHNTRYWDNEHYYGFGAGASGYIDNLRYKNHGPI----QHYLMPLEDNQLPIIER 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDW 346
           E L ++ Q +E + +GLR+++G+S + +
Sbjct: 305 EELLTKHQIEEEMFLGLRMKKGVSKEKF 332


>gi|320160979|ref|YP_004174203.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
           thermophila UNI-1]
 gi|319994832|dbj|BAJ63603.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
           thermophila UNI-1]
          Length = 405

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 211/397 (53%), Gaps = 36/397 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-----GPRSIS- 72
           + +Y+H PFCV +C YCDFN++      G E +I ++   +   R++       P  IS 
Sbjct: 16  VSIYIHIPFCVHRCAYCDFNTYA-----GMEKWIPAYTEAL--CREIAVVSEAAPEGISV 68

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +IFFGGGTPS +    +  +L  +  ++ V    EI++EANP +VE + F+  R+AG N
Sbjct: 69  QTIFFGGGTPSYLSASLLNKVLHTVRSHFQVMEKAEISLEANPGTVEPHLFEELREAGFN 128

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+QS   + L+FL R H   +   ++  AR   F  ++ DLI+ +P QT+  W+  
Sbjct: 129 RLSIGMQSAIPKELKFLTRIHTVEDVQNSVIQARKAGFQNINLDLIFGIPGQTIQTWKNS 188

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ ALS   +H+SLY LT+E+GT      ++G + +PS++ A +LY  +    +  G   
Sbjct: 189 LEFALSLQPEHVSLYSLTVEEGTPLNHWVEEGKISMPSDDDAAELYEYSMDAMAEAGYLQ 248

Query: 251 YEISN--HSFLGAESL---HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           YEISN     L  + L   HNL YWRY  Y+G G G+H   +       + I   PE   
Sbjct: 249 YEISNWAKQDLNGDWLMCRHNLQYWRYLPYLGFGAGSHGFFENTRISNVLGI---PEYIN 305

Query: 306 KMVRKNGH------AVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNL---- 354
           ++   + H      AV +   L  ++Q  EF+M+GLRL  EG+S+ ++    G +L    
Sbjct: 306 RIKSLSSHQFPASAAVDQILILDRQEQMKEFMMVGLRLTHEGVSLLEFYHRFGVSLLEVF 365

Query: 355 DIECERNLQRQGFIERV-QFSRLRCTQRGMTMLDSVI 390
             E E  L R G IE   +  RLR T+RG  + + V 
Sbjct: 366 GKEIEFLLAR-GLIEWFNENKRLRLTKRGKLLGNQVF 401


>gi|297621212|ref|YP_003709349.1| putative coproporphyrinogen III oxidase [Waddlia chondrophila WSU
           86-1044]
 gi|297376513|gb|ADI38343.1| putative coproporphyrinogen III oxidase [Waddlia chondrophila WSU
           86-1044]
          Length = 370

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 199/387 (51%), Gaps = 28/387 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE---MQW--MRQLTGPR 69
           G++   +YVH P C KKC YC F      Y V  +    + L+E   ++W   R     R
Sbjct: 3   GNSHYSIYVHIPLCTKKCDYCHF------YVVPDKEPYHALLSEGLKLEWEAYRSHFQGR 56

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +++S++FGGGTPSL +P++I  IL  +       S  EIT+EANP ++     + +  AG
Sbjct: 57  NLASVYFGGGTPSLFDPRSIEKILSFLP----CCSATEITLEANPENLSEQRIREFADAG 112

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           +NR+S+G+QSL+++ L  L R H A +AI  I  A       +S DL+Y +P+QT+  W+
Sbjct: 113 INRLSIGIQSLDDKQLELLTRGHGAQKAIDGIEAAFAAGIENISIDLMYDIPEQTLENWK 172

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L+ A++  + HLSLY LT E  T+F+K  +     LPSE  +  +Y       +A+G 
Sbjct: 173 ETLRLAINLPITHLSLYNLTFEPHTVFFKHRERLKASLPSEETSASMYKTAVETLTANGF 232

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEIS       +S+HN  YW   ++IG+GP A S       R    + +    W + +
Sbjct: 233 IQYEISAFCKPNRQSVHNSGYWTGREFIGLGPSAFSYWNGSRFRNIARLHQ----WHQAL 288

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
           ++    V   E L+      E L + LRL EG+++ +++      +D E    ++R    
Sbjct: 289 KEGKSPVDYSESLAPAAAQKEKLAIRLRLLEGVNLSEFK------IDRETSDGIKRMIAS 342

Query: 369 ERVQFSR--LRCTQRGMTMLDSVIANL 393
           E +   +  LR T++G+   D+V   +
Sbjct: 343 ELLALEKGVLRLTEKGILFYDTVATEI 369


>gi|282861821|ref|ZP_06270885.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           ACTE]
 gi|282563637|gb|EFB69175.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           ACTE]
          Length = 413

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 189/396 (47%), Gaps = 22/396 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  R
Sbjct: 25  LEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLVEEVRQAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV    
Sbjct: 85  KVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLADDAEITTEANPESVGPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            Q  R+ G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LQALREGGFNRISFGMQSARQHVLKILDRTHTPGRPEACVAEARAAGFEHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +  
Sbjct: 205 GESDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAD 264

Query: 241 SITSAHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +A G   YE+SN S       LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EAMAAAGFSWYEVSNWSRTPEGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +       +E L  E +  E +++ LRL EG  +            +   
Sbjct: 321 HPGAYAQALAEGRSPGAGREVLGDEDRRVERILLELRLVEGCPLSLLAPAG-----LAAA 375

Query: 360 RNLQRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
                 G +E   F   R   T RG  + D+V+ +L
Sbjct: 376 GRAVADGLLEPGPFGEGRAVLTLRGRLLADAVVRDL 411


>gi|237755862|ref|ZP_04584458.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691973|gb|EEP60985.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 365

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 15/372 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S V +    ++ ++++   E+  +  L     I +I+FGGG
Sbjct: 4   GIYIHIPFCNIKCPYCDFTSFVWQEDKLKDRYVEALKKEL--LMYLDNDFDIQTIYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++P+ IA I+D I  N     N+EIT+E NP + E + F+  + AGVNRIS+G QS
Sbjct: 62  TPSTLKPEKIAEIIDFIKNNVKHQKNLEITVEINPKTYEYDEFKIIKDAGVNRISIGNQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++L  LGR+H   ++   I +  +     ++ DLIY +  QT+   E +L+   S  
Sbjct: 122 FLEKNLTMLGRDHKPEDSYKTIENCLKAGISNINLDLIYGIQNQTLQDLEKDLEIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT  + T    + + G   LP E++   ++ +        G   YE+SN + 
Sbjct: 182 ITHISAYMLTAYEDTPLGTLVEKGLYHLPDEDLVYQMFLMIDQALHNKGFERYELSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++GIG  A S   + + R   +  K+   +L+ V K    V   
Sbjct: 242 KGYECKHNLFYWIDVNFLGIGVSAWSY--IDNKRFGNT--KNINEYLENVEKGIKPVKFS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  +++ +E + +GLRL+EGI V   +++  ++L     + L  +G+ + V+  R   
Sbjct: 298 EVLDEKKKLEEKIFLGLRLKEGIDV---DLIKNKDL----LKELVDEGYGD-VKDGRFYL 349

Query: 379 TQRGMTMLDSVI 390
             +G+ +++ ++
Sbjct: 350 LPKGIMVINEIV 361


>gi|319939258|ref|ZP_08013621.1| coproporphyrinogen III oxidase [Streptococcus anginosus 1_2_62CV]
 gi|319811654|gb|EFW07930.1| coproporphyrinogen III oxidase [Streptococcus anginosus 1_2_62CV]
          Length = 376

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 204/375 (54%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + ++L  +    +    + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDAYLEHLIQEYRAYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ + P  +  +L  + K+  +SS  E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTSLSPTQLEFLLAELTKSLDLSSLEELTIEANPGDLDPDKIAVLKDSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E IA + LA   F  +S DLIYALPKQTM      + +A++ 
Sbjct: 123 DDRMLKQIGRSHLEKDIYENIANLKLAG--FDNISIDLIYALPKQTMDNVRENVAKAIAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E++  +++          G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIEELEKAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V K G+A V 
Sbjct: 241 KPGFESQHNLMYWDNAEYFGIGAGASGYVNGVRYKNHGPI-RH---YLEAVEK-GNARVN 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFS 374
           +E LS ++  +E + +GLR + G+S K +E   G + D +       L  QG +   +  
Sbjct: 296 EEHLSKQEMMEEEMFLGLRKKSGVSKKRFEEKFGVSFDRQYGHVVTELIEQGLLVPDK-E 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T++G+ + D+V
Sbjct: 355 IVRMTKKGLFLGDTV 369


>gi|312898010|ref|ZP_07757419.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera micronuciformis F0359]
 gi|310620935|gb|EFQ04486.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera micronuciformis F0359]
          Length = 373

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 196/362 (54%), Gaps = 22/362 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G+YVH PFCV+KC YCDF S+  +  Y    ++++++   E++    +    +  +++FG
Sbjct: 3   GLYVHIPFCVRKCLYCDFPSYGGISSY---LDDYVEALCREIRATSYI--GEAADTVYFG 57

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +    I+  +   + + ++ EIT E NP  ++ +  +   K GVNRIS+G+
Sbjct: 58  GGTPSLLTARQGEKIMSALTDTFRIDADSEITFEVNPDGIKSDYIRDLIKIGVNRISMGI 117

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L+ L R H ++EA AA+   R      +S DLIY LP Q+    E + +  + 
Sbjct: 118 QSFDDRLLQLLRRVHTSAEAFAALEAVRTGGVTNVSADLIYGLPGQSPEDAETDARSLIE 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E+GT+  ++ + G+++LP + V  +            GL  YEIS +
Sbjct: 178 LGVTHASAYSLIVEEGTMLKRLVRKGEILLPEDRVTEEAGERVCHTLEKGGLKRYEISAY 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +S HNL YW+Y  YIG G  +HS    G++R + +I   PE ++K   K    + 
Sbjct: 238 AAEGFQSKHNLKYWQYEPYIGFGASSHSF--DGTYRFS-NIRSLPE-YIKNAGKT-SVLA 292

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD------IECERNLQRQGFIER 370
           E E +  E+  ++F  +GLR  +GI  K +E    R +       IE   +L  +GF+E+
Sbjct: 293 EHELIDKERGEEDFCFLGLRTMKGIDNKRFERCFKRTVTDAFGTVIE---DLVLRGFLEK 349

Query: 371 VQ 372
            +
Sbjct: 350 TE 351


>gi|300788491|ref|YP_003768782.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
 gi|299798005|gb|ADJ48380.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
          Length = 410

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 175/347 (50%), Gaps = 18/347 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------ENFIQSFLTEMQ 60
           E+ + G GS + GVYVH PFC  +C YCDFN+    Y  G+       E++++    E++
Sbjct: 23  ESALKGLGSRAFGVYVHVPFCATRCGYCDFNT----YTAGELDSGSSPESWLEGLRRELE 78

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              R L  P +  ++F GGGTPSL+    +  +LD +   + ++   E+T E+NP S   
Sbjct: 79  LAARTLVVPPAADTVFVGGGTPSLLGADGLRSVLDAVRDVFGLAPGAEVTTESNPESTSP 138

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
             F G R+AG  RISLG+QS     L+ L R H       A   AR   F  ++ D+IY 
Sbjct: 139 EFFAGIREAGYTRISLGMQSAAPHVLKILDRVHTPGRPGKAAAEARAAGFEHVNLDVIYG 198

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +        L   L+  VDH+S Y L +E+GT   +  + G+L  P ++V    Y +
Sbjct: 199 TPGERADDLRATLDAVLAAGVDHVSAYALIVEEGTALARRVRRGELPAPDDDVLAADYEM 258

Query: 239 TQSITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
             ++ S+ GL  YE+SN  +   A   HNL YWR  D+ G GPGAHS V      V    
Sbjct: 259 IDAMLSSAGLRWYEVSNWAASDAARCRHNLGYWRGDDWWGAGPGAHSHVG----GVRWWN 314

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            KHP  +  ++         +E L+ + Q  E +M+ LR+ EG+ + 
Sbjct: 315 VKHPARYAALLAGGDSPAAGREVLTDDDQHLERIMLELRVAEGLPLD 361


>gi|293552732|ref|ZP_06673396.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1039]
 gi|291603112|gb|EFF33300.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1039]
          Length = 388

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 194/382 (50%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+   + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFNNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +  R+  T RG  + ++V 
Sbjct: 361 VNEE-DRVYLTPRGTFLGNNVF 381


>gi|197301866|ref|ZP_03166935.1| hypothetical protein RUMLAC_00592 [Ruminococcus lactaris ATCC
           29176]
 gi|197299096|gb|EDY33627.1| hypothetical protein RUMLAC_00592 [Ruminococcus lactaris ATCC
           29176]
          Length = 390

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 209/397 (52%), Gaps = 24/397 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           NNM       L +Y+H PFCVKKC YCDF S     +  QE ++Q+ + E++  +     
Sbjct: 2   NNMK---KRDLELYLHIPFCVKKCNYCDFFSAAGS-REEQEAYVQAMIQEIRGYKDSLHS 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++F GGGTPSL+  +    +   +  ++T+  + EIT+E NP +V +   + Y+ A
Sbjct: 58  YEVKTVFLGGGTPSLLSERQAEELFQSLYDSFTIQKDAEITMEVNPGTVNLEKLKQYKAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR+SLG+QS   + L+ LGR H   + +A  +      F   + DL+  LP QTM  W
Sbjct: 118 GVNRLSLGLQSARNEELQRLGRIHTYEDFLATWNFTEKAGFENRNIDLMSELPGQTMESW 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-----VLPSENVAVDLYNLTQSI 242
           E  L++ ++   +H+S Y L +E+GT FY  +++G        LPSE     +   T   
Sbjct: 178 EDTLEKVIALEPEHISAYSLILEEGTRFYHWYQEGKFDSGEWKLPSEEEEYRMGEWTIER 237

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +  G+  YEISN++  G E  HNL YW   +Y+GIG GA S ++        S  ++ +
Sbjct: 238 LAKAGMERYEISNYARTGQECRHNLGYWDRVEYLGIGAGASSLLR----NRRFSHIRNRK 293

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD------I 356
           ++++ + +      E+E LS E Q +EF+ +GLR   GIS + +E    + +       I
Sbjct: 294 TYIEAIHEKQPIETEEELLSEESQMEEFMYLGLRKVNGISKEKFERTFQKPISEVYGTVI 353

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E   + Q +  +E  +  R+  ++RGM + + V+A  
Sbjct: 354 E---HFQAEHLLE-CKGDRIFLSRRGMDVSNYVLAEF 386


>gi|293568111|ref|ZP_06679448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1071]
 gi|291589193|gb|EFF21004.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1071]
          Length = 388

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 194/382 (50%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +  R+  T RG    ++V 
Sbjct: 361 VNEE-DRVYLTPRGTFFGNNVF 381


>gi|283783315|ref|YP_003374069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gardnerella vaginalis 409-05]
 gi|283441340|gb|ADB13806.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gardnerella vaginalis 409-05]
          Length = 436

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 175/351 (49%), Gaps = 29/351 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VYVH PFC+++C YCDFN++  R       +E +    + EM+ +++      +  P++ 
Sbjct: 19  VYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIQEMRLVKKWQEYHGIFEPKA- 77

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTP++++ Q++  IL  I   W  + + EIT EANP + +    +   + G  
Sbjct: 78  QSVFFGGGTPTVLKAQDLVRILQEIRNLWGFNKDAEITTEANPDTADEKYIETLAEGGFT 137

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L+ L R H        +  A     R S DLIY  P +++  W   +
Sbjct: 138 RISFGMQSAVPHVLKTLDRTHTPENVTRGVKAANACGLRSSVDLIYGAPGESLDDWRESV 197

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + ALS  V+H+S Y LT+E  T   +    G +  P+++     Y L   + ++ GL  Y
Sbjct: 198 EMALSLGVNHISAYALTVEPRTKMGRQIAAGTIQAPNDDDEAQKYELADELFNSAGLQWY 257

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK------------ 299
           EISN +  G ES HNL YWR  D+ GIGPGAHS     +     S++             
Sbjct: 258 EISNWARPGFESQHNLGYWRNIDWAGIGPGAHSHYNAANRISKQSMDDSASLANPNEFYN 317

Query: 300 -------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                  HP+ W   +          E +++E    E +M+GLR++EG+++
Sbjct: 318 LRSWDILHPKRWAHAINLGNVPWQNYECINAEDALIEEVMLGLRIKEGLNI 368


>gi|76799344|ref|ZP_00781505.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae 18RS21]
 gi|76585305|gb|EAO61902.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae 18RS21]
          Length = 376

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 208/379 (54%), Gaps = 17/379 (4%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++Q+ + E +    +T  R++   + GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLQALIREFRSY-DITELRTL---YIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I    +  +L  ++++  +++  E TIEANP  + V+  +  +K+ VNR+SLGVQ+ 
Sbjct: 63  PTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLXVDKIEVLQKSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +ALS  +
Sbjct: 123 NDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   +    +R    I+     +LK V + G+A + +E
Sbjct: 243 GFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQH----YLKGVSE-GNARLSEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRL 376
            LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++      +
Sbjct: 298 VLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENN-GFI 356

Query: 377 RCTQRGMTMLDSVIANLAV 395
           + T++G+ + D+V     V
Sbjct: 357 QMTKKGLFLGDTVAEKFIV 375


>gi|256375378|ref|YP_003099038.1| coproporphyrinogen III oxidase [Actinosynnema mirum DSM 43827]
 gi|255919681|gb|ACU35192.1| oxygen-independent coproporphyrinogen III oxidase [Actinosynnema
           mirum DSM 43827]
          Length = 404

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 191/398 (47%), Gaps = 31/398 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------ENFIQSFLTEMQWM- 62
           + G G+   GVYVH PFC  +C YCDFN+    Y  G+       E++++    E+    
Sbjct: 22  LEGLGTRPFGVYVHVPFCATRCGYCDFNT----YTAGELGTSASPESWLEGLRRELDLAA 77

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           R L  P +  ++F GGGTPSL+    +A +L+ +  +  ++   E+T E+NP S     F
Sbjct: 78  RVLGSPPAAETVFVGGGTPSLLGADGLAAVLEAVRSSVGLAPGAEVTTESNPESTSSEFF 137

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPK 181
              R+AG  R+SLG+QS     L+ L R H     A AA       F  ++ DLIY  P 
Sbjct: 138 AAIREAGYTRVSLGMQSAARHVLQILDRKHTPGRAAAAAREAREGGFEHVNLDLIYGTPG 197

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +        L       VDHLS Y L +E+GT   +  + G+L  P ++V  + Y +  +
Sbjct: 198 ERDEDLRESLAVVRDAGVDHLSAYALIVEEGTALARRVRRGELPAPDDDVLAERYEMVDA 257

Query: 242 ITSAHGLHAYEISN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                G+  YE+SN  +       HN+ YW+  D+ G GPGAHS V      V     KH
Sbjct: 258 AAREMGMSWYEVSNWAASEEGRCRHNVLYWQGADWWGAGPGAHSHVG----GVRWWNVKH 313

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +  ++   G     +E L+ + +  E +++ LRL EG+ V+         LD +  R
Sbjct: 314 PAKYAAVLAGGGSPAAGREVLAEDDRRVERVLLELRLSEGLPVE--------VLDRDGRR 365

Query: 361 NLQR---QGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
              R   +G +E +  +R RC  T RG  + D+V+  L
Sbjct: 366 EAARVAAEGLLEPMALARGRCVLTDRGRLLADAVVRRL 403


>gi|225870719|ref|YP_002746666.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           equi subsp. equi 4047]
 gi|225700123|emb|CAW94238.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus equi subsp. equi 4047]
          Length = 376

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 203/375 (54%), Gaps = 19/375 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+   ++   V  + ++++ + E +  +      S+ +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFSKVFIKNQPV--DAYLEALIKEFESYQ----ISSLKTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ I    +  +L  + ++  +    E TIEANP  +  +     R++ VNRISLGVQ+
Sbjct: 62  TPTAITANQLDYLLSHLQQHLQLDQLEEFTIEANPGDLTEDKIAVLRQSAVNRISLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ +GR+H  ++    I  L    F  MS DLIYALP QTM Q +  + +AL+  
Sbjct: 122 FNDKQLKQIGRSHTEAQIYTTIASLKEAGFQNMSIDLIYALPGQTMQQVKENVAKALALD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLSLY L +E  T+F    + G L LP+E++  +++    S   A G   YEISN + 
Sbjct: 182 IPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMEASGFEHYEISNFTK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GA   +    +R  + I+     +LK V  +G+A + +
Sbjct: 242 PGFESRHNLMYWNNDEYFGCGAGASGYLDGIRYRNRVPIQH----YLKAV-ADGNARLSE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQG-FIERVQFS 374
           E L+ E+  +E L +GLR + G+SV  ++   G + +       R LQ QG  +E   F 
Sbjct: 297 EVLTKEEMMEEELFLGLRKKSGVSVSRFQEKFGLSFESRYGPVVRELQNQGLLVEDKDF- 355

Query: 375 RLRCTQRGMTMLDSV 389
            +R T++G+ + DSV
Sbjct: 356 -IRMTKKGLFLGDSV 369


>gi|226311614|ref|YP_002771508.1| oxygen-independent coproporphyrinogen III oxidase [Brevibacillus
           brevis NBRC 100599]
 gi|226094562|dbj|BAH43004.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brevibacillus brevis NBRC 100599]
          Length = 379

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/332 (34%), Positives = 174/332 (52%), Gaps = 20/332 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           VY+H PFC  KC YCDFNS V        +++ +  +EM+          + +IF GGGT
Sbjct: 5   VYIHIPFCTNKCYYCDFNSFVTNNPQLIWDYLDALKSEMEITFSQQLIEQVKTIFVGGGT 64

Query: 81  PSLIEPQNIALILDGIAKN----WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           P+ ++   +   L+ + K     WT   ++E ++EANP + +V   +  R+ GVNR+S G
Sbjct: 65  PTFLDHAQMRAFLEMVQKQLGKYWT--DDIEFSMEANPGTTDVEKLRIMRELGVNRLSFG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS ++  L+ LGR H+      +I  A+ + F   S DL++ LP QT+  +   L +A 
Sbjct: 123 VQSFDDALLKRLGRIHDQEAVYRSIDNAKKVGFDNFSIDLMFGLPDQTLDIFRQTLDKAF 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                H S Y L +E+ TLF+ +++   L LPSE   +++Y +       HG   YEISN
Sbjct: 183 GLGTTHFSAYSLKVEENTLFHTLYQKDQLPLPSEETELEMYMVLIEEMERHGYKQYEISN 242

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKN 311
            +  G ES HN  YW   +Y G+G GAH  V     V +  +AI ++K          K 
Sbjct: 243 FAKPGFESKHNKTYWLNREYYGLGAGAHGYVCGHRHVNAGPLAIYLQKC---------KE 293

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           G   VE+  +  E   +E +++GLRLREG+ +
Sbjct: 294 GLPRVEQFEVPREDAMEEQMILGLRLREGVDL 325


>gi|22537053|ref|NP_687904.1| coproporphyrinogen III oxidase [Streptococcus agalactiae 2603V/R]
 gi|76788033|ref|YP_329635.1| coproporphyrinogen III oxidase [Streptococcus agalactiae A909]
 gi|77405734|ref|ZP_00782820.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae H36B]
 gi|77410991|ref|ZP_00787346.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae CJB111]
 gi|22533911|gb|AAM99776.1|AE014232_14 oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae 2603V/R]
 gi|76563090|gb|ABA45674.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae A909]
 gi|77162915|gb|EAO73871.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae CJB111]
 gi|77175656|gb|EAO78439.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae H36B]
          Length = 376

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 208/379 (54%), Gaps = 17/379 (4%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++Q+ + E +    +T  R++   + GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLQALIREFRSY-DITELRTL---YIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I    +  +L  ++++  +++  E TIEANP  + V+  +  +K+ VNR+SLGVQ+ 
Sbjct: 63  PTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +ALS  +
Sbjct: 123 NDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   +    +R    I+     +LK V + G+A + +E
Sbjct: 243 GFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQH----YLKGVSE-GNARLSEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRL 376
            LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++      +
Sbjct: 298 VLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENN-GFI 356

Query: 377 RCTQRGMTMLDSVIANLAV 395
           + T++G+ + D+V     V
Sbjct: 357 QMTKKGLFLGDTVAEKFIV 375


>gi|257898259|ref|ZP_05677912.1| coproporphyrinogen III oxidase [Enterococcus faecium Com15]
 gi|257836171|gb|EEV61245.1| coproporphyrinogen III oxidase [Enterococcus faecium Com15]
          Length = 388

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 173/335 (51%), Gaps = 10/335 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +        E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQDGKEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETKMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGNIRYRNKGPI----QHYLRPLRVN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              V+E+E L+ + Q +E + +GLR + GI+ K +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGIAKKHF 335


>gi|69249348|ref|ZP_00604944.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium DO]
 gi|257882925|ref|ZP_05662578.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,502]
 gi|257889296|ref|ZP_05668949.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,410]
 gi|258615970|ref|ZP_05713740.1| coproporphyrinogen III oxidase [Enterococcus faecium DO]
 gi|260560093|ref|ZP_05832271.1| coproporphyrinogen III oxidase [Enterococcus faecium C68]
 gi|261207419|ref|ZP_05922105.1| coproporphyrinogen III oxidase [Enterococcus faecium TC 6]
 gi|289566481|ref|ZP_06446906.1| oxygen-independent coproporphyrinogen III oxidase [Enterococcus
           faecium D344SRF]
 gi|293560178|ref|ZP_06676680.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1162]
 gi|294621558|ref|ZP_06700724.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium U0317]
 gi|314939967|ref|ZP_07847167.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a04]
 gi|314942576|ref|ZP_07849410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133C]
 gi|314947475|ref|ZP_07850890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0082]
 gi|314952498|ref|ZP_07855499.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133A]
 gi|314992405|ref|ZP_07857831.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133B]
 gi|314996245|ref|ZP_07861304.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a01]
 gi|68194198|gb|EAN08726.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium DO]
 gi|257818583|gb|EEV45911.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,502]
 gi|257825656|gb|EEV52282.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,410]
 gi|260073928|gb|EEW62252.1| coproporphyrinogen III oxidase [Enterococcus faecium C68]
 gi|260078310|gb|EEW66015.1| coproporphyrinogen III oxidase [Enterococcus faecium TC 6]
 gi|289161746|gb|EFD09621.1| oxygen-independent coproporphyrinogen III oxidase [Enterococcus
           faecium D344SRF]
 gi|291598863|gb|EFF29914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium U0317]
 gi|291605850|gb|EFF35282.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1162]
 gi|313589567|gb|EFR68412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a01]
 gi|313593040|gb|EFR71885.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133B]
 gi|313595404|gb|EFR74249.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133A]
 gi|313598680|gb|EFR77525.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133C]
 gi|313640801|gb|EFS05381.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a04]
 gi|313646025|gb|EFS10605.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0082]
          Length = 388

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 14/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMKIMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYLDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +  R+  T RG  + ++V 
Sbjct: 361 VNEE-DRVYLTPRGTFLGNNVF 381


>gi|298252746|ref|ZP_06976540.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis 5-1]
 gi|297533110|gb|EFH71994.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis 5-1]
          Length = 440

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 175/351 (49%), Gaps = 29/351 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VYVH PFC+++C YCDFN++  R       +E +    + EM+ +++      +  P++ 
Sbjct: 23  VYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIQEMRLVKKWQEYHGIFEPKA- 81

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTP++++ Q++  IL  I   W  + + EIT EANP + +    +   + G  
Sbjct: 82  QSVFFGGGTPTVLKAQDLVRILQEIRNLWGFNKDAEITTEANPDTADEKYIETLAEGGFT 141

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L+ L R H        +  A     R S DLIY  P +++  W   +
Sbjct: 142 RISFGMQSAVPHVLKTLDRTHTPENVTRGVKAANACGLRSSVDLIYGAPGESLDDWRESV 201

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + ALS  V+H+S Y LT+E  T   +    G +  P+++     Y L   + ++ GL  Y
Sbjct: 202 EMALSLGVNHISAYALTVEPRTKMGRQIAAGTIQAPNDDDEAQKYELADELFNSAGLQWY 261

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK------------ 299
           EISN +  G ES HNL YWR  D+ GIGPGAHS     +     S++             
Sbjct: 262 EISNWARPGFESQHNLGYWRNIDWAGIGPGAHSHYNAANRISKQSMDDSASLANPNEFYN 321

Query: 300 -------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                  HP+ W   +          E +++E    E +M+GLR++EG+++
Sbjct: 322 LRSWDILHPKRWAHAINLGNVPWQNYECINAEDALIEEVMLGLRIKEGLNI 372


>gi|326791217|ref|YP_004309038.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           lentocellum DSM 5427]
 gi|326541981|gb|ADZ83840.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           lentocellum DSM 5427]
          Length = 376

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 187/340 (55%), Gaps = 12/340 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           +G+Y+H PFC  KC YCDF S  R  K  QE ++ + + EM Q  + L    +I SIF G
Sbjct: 3   IGLYIHIPFCASKCYYCDFLSFKRHEK--QEAYVDALIQEMEQTKKDLVSGTTIKSIFIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  +  +L  +   + +  + E TIEANP ++++   Q  RK  + RISLG+
Sbjct: 61  GGTPTVLPPLLLDKLLKAVVSCFNIEPDAEWTIEANPGTIDIEKLQVLRKYPITRISLGL 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  LR +GR H   +   +I L + +    ++ DL++ALP QT   +   L    +
Sbjct: 121 QSTHDDLLRKIGRIHTFKDWEESIGLIKQHTSWEINTDLMFALPGQTEEAFLETLNTVTA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y +DHLS+Y L IE+GT FYK++++G L + S+ +   +Y+  Q   +  G   YEISN 
Sbjct: 181 YDIDHLSVYALIIEEGTTFYKLYEEGKLEVASDELDRRMYHTAQRYLNDKGYIQYEISNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW--LKMVRKNGHA 314
           S       HN  YW+   YIGIG GAHS +    +    ++E +  +   L ++RK    
Sbjct: 241 SKPDKSCKHNAIYWQLEPYIGIGLGAHSLMNHARYYNETNMEAYLSAAGNLSLLRK---- 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             E+E L+ E    E++ +GLRL +GI    +E   G ++
Sbjct: 297 --EEEKLTKEMAMQEYMFLGLRLLQGIDTLAFEKRFGESV 334


>gi|225868346|ref|YP_002744294.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           equi subsp. zooepidemicus]
 gi|225701622|emb|CAW98890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus equi subsp. zooepidemicus]
          Length = 376

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 204/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++++ + E +  +      S+ +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLEALIKEFESYQ----INSLKTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L  + ++  +    E TIEANP  +  +     R++ VNRISLGVQ+ 
Sbjct: 63  PTAITAKQLDYLLSHLQQHLQLDQLEEFTIEANPGDLTEDKIAVLRQSAVNRISLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H  ++    I  L    F  MS DLIYALP QTM Q +  + +AL+  +
Sbjct: 123 NDKQLKQIGRSHTEAQIYTTIASLKEAGFQNMSIDLIYALPGQTMQQVKENVAKALALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMEASGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    +R  + I    + +LK V  +G+A + +E
Sbjct: 243 GFESRHNLMYWNNDEYFGCGAGASGYLNGIRYRNRVPI----QHYLKAV-ADGNARLSEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ E+  +E L +GLR + G+SV  ++   G + +       R LQ QG + + +   +
Sbjct: 298 VLTKEEMMEEELFLGLRKKSGVSVSRFQEKFGLSFESRYGPVVRELQNQGLLVKDK-DFV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 357 RMTKKGLFLGDSV 369


>gi|257887147|ref|ZP_05666800.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,141,733]
 gi|293571903|ref|ZP_06682919.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E980]
 gi|257823201|gb|EEV50133.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,141,733]
 gi|291608157|gb|EFF37463.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E980]
          Length = 388

 Score =  197 bits (500), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 173/335 (51%), Gaps = 10/335 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +        E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQDGKEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMKFLKAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETKMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGNIRYRNKGPI----QHYLRPLRVN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              V+E+E L+ + Q +E + +GLR + GI+ K +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGIAKKHF 335


>gi|331698269|ref|YP_004334508.1| oxygen-independent coproporphyrinogen III oxidase [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952958|gb|AEA26655.1| oxygen-independent coproporphyrinogen III oxidase [Pseudonocardia
           dioxanivorans CB1190]
          Length = 406

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 183/383 (47%), Gaps = 13/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH----VRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
              GVYVH PFC  +C YCDFN++    +       + ++++   E+     + G R + 
Sbjct: 25  TPFGVYVHVPFCASRCGYCDFNTYTADELADSGASPDGWLEAVRRELAGAAAVVGDRRVD 84

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSLI  Q +  +LD +   + ++   E+T E+NP S     F G   AG  R
Sbjct: 85  TVFVGGGTPSLIGAQRLGAVLDAVRAEFGLAEGAEVTTESNPESTSPEFFAGLVDAGYTR 144

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS     L  L R H    A+AA   AR      ++ DLIYA P +T       L
Sbjct: 145 VSLGMQSAASHVLAVLDRRHTPGRAVAAAREARAAGIGHVNLDLIYATPGETDDDLRASL 204

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              LS  VDH+S Y L +E GT   +  + G+L  P ++VA   Y +     S  GL  Y
Sbjct: 205 DAVLSAGVDHVSAYSLIVEDGTALARRVRRGELPAPDDDVAAARYEILDDALSEAGLRWY 264

Query: 252 EISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           E+SN +   A +  HNL YW  GD+ G GPGAHS +   + R   ++ KHP  +  M+  
Sbjct: 265 EVSNWARDDAAACRHNLGYWLDGDWWGAGPGAHSHL---AGRRWWNV-KHPARYAAMLAA 320

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                   E L  E++A E +M+ LRL  G+ +   +              L     +E 
Sbjct: 321 GEAPEAGHEVLGPEERATERVMLRLRLATGLPLDLLDAPGRAAAGRAAAEGLLDGAALE- 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
               R   T+RG  + D V+ +L
Sbjct: 380 --TGRAVLTRRGRLLADRVVTDL 400


>gi|323436159|ref|ZP_01050978.2| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dokdonia donghaensis MED134]
 gi|321496474|gb|EAQ38129.2| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dokdonia donghaensis MED134]
          Length = 377

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 199/380 (52%), Gaps = 17/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF  H       +E  I + ++E++  +       +S+++FGGG
Sbjct: 3   SIYIHIPFCKQACHYCDF--HFSTTMGKKEEMITAIISELEMRKAEFENDEVSNLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  I+D    ++ +  + EIT+EANP  +     +    + +NR+S+GVQS
Sbjct: 61  TPSVLNTEEIEQIIDACYTHYKIEKDPEITLEANPDDLTEQKIRELAASPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA EAI  + L R  FP  S DLIY +P  +  +WE  + + L+  +
Sbjct: 121 FYEEDLKLMNRAHNAQEAIDCLRLTRATFPNSSLDLIYGIPGMSNERWEQNIDKVLALDL 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHGLHAYEISNHSF 258
            H+S Y LT+E  T      K G +V P E+ VA   + L      A G   YE SN + 
Sbjct: 181 PHISAYALTVEPKTALENFIKKG-IVPPVEDEVAQQHHELLIRKMEAAGYENYEFSNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N  YW+   YIGIGP AHS       R A +I  +P+ ++K +   G    E 
Sbjct: 240 PGYHSRNNTAYWQGKKYIGIGPSAHS---YDGKRRAWNINNNPK-YIKAITA-GELPQEV 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIE-CERNLQRQ-GFIERVQF 373
           E LS   Q +E++M  LR + G+S+ + +   G    N  +E  +++++    FIE    
Sbjct: 295 EELSLTDQYNEYVMTRLRTQYGVSLLEIKTQYGERFYNYFLEHAQKHIEEHLLFIEE--- 351

Query: 374 SRLRCTQRGMTMLDSVIANL 393
            R+  +++G  + D + ++L
Sbjct: 352 DRVYVSKKGKFLSDGIASDL 371


>gi|315303221|ref|ZP_07873871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria ivanovii FSL F6-596]
 gi|313628403|gb|EFR96886.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria ivanovii FSL F6-596]
          Length = 388

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP   + ++
Sbjct: 14  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTVAKGPIAPVDTV 69

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS
Sbjct: 70  FVGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRIS 129

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   ++  L++
Sbjct: 130 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQ 189

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 190 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEI 249

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N  
Sbjct: 250 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENIL 305

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 306 PTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 356


>gi|260578255|ref|ZP_05846171.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           jeikeium ATCC 43734]
 gi|258603557|gb|EEW16818.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           jeikeium ATCC 43734]
          Length = 409

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 201/410 (49%), Gaps = 41/410 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTG-----P 68
           G+Y+H PFC  +C YCDFN++  +     +      N I  +L  ++   ++       P
Sbjct: 3   GLYIHVPFCSTRCGYCDFNTYTPQELSAADGSAVDGNTIPGYLDALERELEVAAEVWDYP 62

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPS++  + +A  L+   +   ++++ E+T EANP S     F G R+A
Sbjct: 63  GEVQTVFFGGGTPSMLGHEGLARALNAARRTIGLAADAEVTTEANPESTSPEFFAGLREA 122

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
           G NRISLG+QS     L+ L R H     I A   A R  F  ++ D+IY  P +T    
Sbjct: 123 GFNRISLGMQSAMGHVLKVLERQHTPGRPIEATREAKRAGFEHINLDVIYGTPTETDEDL 182

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   L   VDH+S Y L +E GT   +  + G+L  P E+   D Y+   +     G
Sbjct: 183 RRTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDTLADRYDAIDARLRDAG 242

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------GSHRVAISIEKHP 301
            + YE+SN +  G E  HNL YWR G + G GPGAH  V++       S  V +   K P
Sbjct: 243 FNWYEVSNWAKPGGECQHNLIYWRSGQWWGAGPGAHGCVRLRGEGHSESGLVRLVNAKRP 302

Query: 302 ES-WLKMV--------RKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            + W  ++         K+G     +VV  E L+++    E +M+ LRL EG+       
Sbjct: 303 ATYWDGLLGEAEGASTGKDGLPVPGSVVTTERLTNDDLRTEHVMLQLRLAEGLK------ 356

Query: 349 LAGRNLDIECERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           L G + + E  + ++R    G +++    RLR T +G  + D ++ ++ +
Sbjct: 357 LVGSDENAELAQVIERYTGLGLLDK-HGERLRLTDKGRYLADGIVTDIVL 405


>gi|81428851|ref|YP_395851.1| coproporphyrinogen III oxidase [Lactobacillus sakei subsp. sakei
           23K]
 gi|78610493|emb|CAI55544.1| Putative coproporphyrinogen oxidase, HemN [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 379

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/333 (35%), Positives = 182/333 (54%), Gaps = 14/333 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G Y+H PFC   C YCDFN   + +  GQ  + ++   + E Q +        I +I+ G
Sbjct: 3   GAYIHIPFCEHICYYCDFN---KVFIEGQPVDEYVDMLIREFQLVMAEYPDEKIETIYVG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLG 136
           GGTP+ + P  +  +LDGI + +      E T EANP+ + +    Q  +  GVNR+S+G
Sbjct: 60  GGTPTTLSPAQLQRLLDGIHQ-YLPYDGGEFTFEANPNDLQDTAKLQVLKDNGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  +  L+ +GR H +++   AI  AR + F  +S DLI+ LP+Q+   +   L++A+
Sbjct: 119 VQSFNDDILKKIGRIHRSADVYRAIANARQVGFENISIDLIFRLPQQSEADFMDSLKQAI 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEIS 254
              + H S Y L +EK T+FY + + G L LPS++V   +Y N   S   A GL  YEIS
Sbjct: 179 DLDLPHYSTYSLILEKKTIFYNLMRQGKLRLPSQDVEAHMYQNAIDSFQQA-GLEQYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +S HNL YWR   Y G G GA+  +    +     I++    +L+ ++ +   
Sbjct: 238 NFAKPGYQSAHNLTYWRNEKYFGFGAGAYGYLGKDRYHNFGPIQQ----YLEPLQAHKVP 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           V+E+  L   +Q +E L +GLR  +G+SVK +E
Sbjct: 294 VIERHVLPLTEQMEEELFLGLRTMQGVSVKHFE 326


>gi|154686810|ref|YP_001421971.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42]
 gi|154352661|gb|ABS74740.1| HemN [Bacillus amyloliquefaciens FZB42]
          Length = 379

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 184/353 (52%), Gaps = 10/353 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ S   EM    + TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNSLEKEMINTIERTGRPDLRTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ + P  +  ++D I +    S   +E   EANP  +     +  + AGVNR+S GVQ+
Sbjct: 63  PTSLSPVQLEKLMDSIHRVLKPSDGLIEFAAEANPDDLSPEKLKIMKNAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E++ L+ +GR H   +   +   AR + F  +S DL++ LP QT+   +  ++ ALS  
Sbjct: 123 FEDELLQKIGRVHKQKDVFTSFERARALGFDNISLDLMFGLPGQTLADLDNSVKTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP++    ++Y       S  G+  YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQEQEAEMYETVMRQMSEAGIRQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GAH  +  G+  V     KH   +++++ + G    + 
Sbjct: 243 PGYESQHNLTYWSNEEYFGFGAGAHGYIS-GTRTVNAGPVKH---YMQLIEEKGLPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFI 368
             ++ E+Q +E + +GLR   G+  + +    GR++D    +  ++L  +G I
Sbjct: 299 HEVTREEQIEEEMFLGLRKMSGVQKQAFLDKFGRSVDELFPDVLKDLTEKGLI 351


>gi|319651617|ref|ZP_08005744.1| coproporphyrinogen III oxidase [Bacillus sp. 2_A_57_CT2]
 gi|317396684|gb|EFV77395.1| coproporphyrinogen III oxidase [Bacillus sp. 2_A_57_CT2]
          Length = 377

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 193/379 (50%), Gaps = 14/379 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            Y+H PFC   C YCDFN   ++   VG+  ++ S   EM    +      + SIF GGG
Sbjct: 5   AYIHIPFCEHICHYCDFNKVFLKNQPVGE--YLDSLDKEMNLALKEVPASRLDSIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +   I       S  E T EANP  +     Q    AGVNR+S GVQ+
Sbjct: 63  TPTALNGKQLEKLCGTIKGQLPYDSFTEYTFEANPGDLSEEKLQILHDAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ +GR+H A +   +I  A+ + F  +S DLIY+LP QT+  ++  L+ + +  
Sbjct: 123 FNDELLKRIGRSHRARDVFQSIEAAKKVGFDNISIDLIYSLPGQTLQDFKDTLETSFTLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L  P E+V  ++Y L       HG   YEISN + 
Sbjct: 183 IAHYSGYSLIIEPKTVFYNLMRKGKLPTPGEDVEAEMYELLMEQMGKHGFAQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW    Y G G GAH  VK G  R   S     + +++ +      ++E+
Sbjct: 243 PGYESRHNITYWDNEWYFGFGAGAHGYVK-GLRR---SNHGPLKKYMEPIENGRLPILEE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFS 374
             +  E+Q +E + +GLR  EG+S+  ++   G++      ++ +++ +++  I   +  
Sbjct: 299 HKVPLEEQMEEEMFLGLRKTEGVSISRFKEKFGKDPLELFKVQIKQHAEKELII--AEED 356

Query: 375 RLRCTQRGMTMLDSVIANL 393
            ++ T+RG  + + V  + 
Sbjct: 357 HIKLTRRGRFLGNEVFQSF 375


>gi|254829765|ref|ZP_05234420.1| coproporphyrinogen III oxidase [Listeria monocytogenes 10403S]
          Length = 385

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP   + ++
Sbjct: 11  SSAVYIHIPFCEHICFYCDFN---KVFLEGQPVDEYVDLLIKEME-LTVAKGPIAPVDTV 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS
Sbjct: 67  FVGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   ++  L++
Sbjct: 127 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 187 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEI 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N  
Sbjct: 247 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENIL 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 303 PTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 353


>gi|16803516|ref|NP_465001.1| coproporphyrinogen III oxidase [Listeria monocytogenes EGD-e]
 gi|224500505|ref|ZP_03668854.1| coproporphyrinogen III oxidase [Listeria monocytogenes Finland
           1988]
 gi|254827764|ref|ZP_05232451.1| hemN [Listeria monocytogenes FSL N3-165]
 gi|284801863|ref|YP_003413728.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5578]
 gi|284995005|ref|YP_003416773.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5923]
 gi|16410905|emb|CAC99554.1| hemN [Listeria monocytogenes EGD-e]
 gi|258600144|gb|EEW13469.1| hemN [Listeria monocytogenes FSL N3-165]
 gi|284057425|gb|ADB68366.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5578]
 gi|284060472|gb|ADB71411.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5923]
          Length = 385

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP   + ++
Sbjct: 11  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTVAKGPIAPVDTV 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS
Sbjct: 67  FVGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   ++  L++
Sbjct: 127 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 187 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEI 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N  
Sbjct: 247 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENIL 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 303 PTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 353


>gi|56963421|ref|YP_175152.1| coproporphyrinogen III oxidase [Bacillus clausii KSM-K16]
 gi|56909664|dbj|BAD64191.1| oxygen-independent coproporphyrinogen oxidase III [Bacillus clausii
           KSM-K16]
          Length = 388

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 197/385 (51%), Gaps = 24/385 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSIS 72
           S  +YVH PFC   C YCDFN      KV  EN     +I + + EM+  R       + 
Sbjct: 2   SHSLYVHIPFCEHICHYCDFN------KVFIENQPVDAYIDALIEEMKQARARRRDGLVK 55

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTP+ +    +  +   I   + +S+  E T+E NP S + +     ++ GVNR
Sbjct: 56  TIYVGGGTPTALTAIQLERLFSAIESLFDLSALEEWTVEVNPDSADEDKLGVMKRYGVNR 115

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G Q+  ++ L  +GR H+      A+  AR++ F  +S DL+  LP Q++  +E  +
Sbjct: 116 LSIGAQTFNQKLLADIGRTHSPEGVEQAVRKARSLGFTNLSIDLMLGLPNQSVADFERSV 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            RALS  V+H+S Y L IEK T+FY  +K G L LP E+  V +Y L +  T+A GL  Y
Sbjct: 176 DRALSLDVEHISAYALKIEKQTVFYNRYKKGQLHLPPEDDDVAMYELLKKKTAAAGLDQY 235

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YWR   Y G G GA        ++    + K    +++ V   
Sbjct: 236 EISNFGKPGYESKHNLVYWRNEPYAGFGAGASGYENQVRYQNINPVAK----YIEAVWAT 291

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNL---QRQG 366
           G   +    +S  +  +E + +GLR+R GI+  D+   A   LD+E    + +   +R+G
Sbjct: 292 GEPRLRTHVVSRAECLEEAVFLGLRIRSGINKADF--FARYGLDVESLFAKEIAEGKRKG 349

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIA 391
            +E      +R T+ G+ + +   A
Sbjct: 350 LLEENDHV-IRLTENGLLLGNEAFA 373


>gi|297571551|ref|YP_003697325.1| oxygen-independent coproporphyrinogen III oxidase [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296931898|gb|ADH92706.1| oxygen-independent coproporphyrinogen III oxidase [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 394

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 195/388 (50%), Gaps = 24/388 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQE--NFIQSFLTEMQWM-RQLT--GPR 69
           ++  G YVH PFC  +C YCDFN++    +  G +  ++ +S   E++    QL   G  
Sbjct: 20  TSGFGAYVHIPFCRVRCGYCDFNTYTNTDFGPGAKVSDYQESVAREIELSSHQLIAGGDP 79

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S++SIFFGGGTP+++    +  IL  + + + V +  EIT EANP SV  +  +  +  G
Sbjct: 80  SLTSIFFGGGTPTMLNATQLVAILRKLRETFGVVNGAEITTEANPESVNRDALETLKNGG 139

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S G+QS     L  L R H   +       AR +    S DLIY  P +++  W+ 
Sbjct: 140 FTRVSFGMQSAVSHVLDTLERQHTPGQVREVTRWARQVGLDYSVDLIYGAPGESLDDWQR 199

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  A++    H+S Y LTIE GT   +  + G+L     +     Y + +   +  G  
Sbjct: 200 SLDAAIALEPGHISAYGLTIEPGTAMGRKVRKGELPETDPDEMATKYEMAEVALNEAGYF 259

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN +  G ES HNL YWR  ++ G GPGAHS +  GS    +   KHP ++ K + 
Sbjct: 260 WYEVSNWAKPGKESRHNLAYWRNTNWWGYGPGAHSHIN-GSRFWNV---KHPGAYAKHLA 315

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE--MLAGRNLDIECERNLQRQGF 367
                  E E L+  ++ +E +M+G+R+ EGI+V D E  ++AG          L   G 
Sbjct: 316 AGMIPAAEIEHLTDAERREEAIMLGVRVAEGIAVPDVEPHVVAG----------LISDGL 365

Query: 368 IERVQFSRLRC--TQRGMTMLDSVIANL 393
           IE  +  R R   T RG  + D+VI  L
Sbjct: 366 IEPGEALRGRIVLTLRGRLLADTVIRAL 393


>gi|328554285|gb|AEB24777.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208]
 gi|328912682|gb|AEB64278.1| Oxygen-independent coproporphyrinogen-III oxidase 1 [Bacillus
           amyloliquefaciens LL3]
          Length = 379

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 183/353 (51%), Gaps = 10/353 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ S   EM    + TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNSLEKEMINTIERTGRPDLRTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ + P  +  ++D + +    S   +E  +EANP  +     +  + AGVNR+S GVQ+
Sbjct: 63  PTSLSPVQLDKLMDSVHRVLKPSDGLIEFAVEANPDDLSSEKLRILKNAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  L+ +GR H   +   +   AR + F  +S DL++ LP QT+   +  ++ ALS  
Sbjct: 123 FEDALLQKIGRVHKQKDVFTSFERARALGFDNISLDLMFGLPNQTLDDLDNSVKTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP++    ++Y       S   +  YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQEKEAEMYETVMRQMSEASIRQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GAH  +  G+  V     KH   +++++ + G    + 
Sbjct: 243 PGYESQHNLTYWSNEEYFGFGAGAHGYIS-GTRTVNAGPVKH---YMQLIEEKGLPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFI 368
             ++ E+Q +E + +GLR   G+  K +    GR++D    +  +NL  +G I
Sbjct: 299 HEVTREEQIEEEMFLGLRKMSGVQKKAFLDKFGRSVDELFPDVLKNLADKGLI 351


>gi|319744940|gb|EFV97271.1| coproporphyrinogen dehydrogenase [Streptococcus agalactiae ATCC
           13813]
          Length = 376

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 205/378 (54%), Gaps = 15/378 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++Q+ + E +    +T  R++   + GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDAYLQALIREFRSY-DITELRTL---YIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + ++  +++  E TIEANP  + V+  +  +K+ VNR+SLGVQ+  
Sbjct: 64  TSISAVQLDYLLTELIRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +ALS  + 
Sbjct: 124 DKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E 
Sbjct: 244 FESRHNLMYWENVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNARLSEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++      ++
Sbjct: 299 LSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENN-GFIQ 357

Query: 378 CTQRGMTMLDSVIANLAV 395
            T++G+ + D+V     V
Sbjct: 358 MTKKGLFLGDTVAEKFIV 375


>gi|212638675|ref|YP_002315195.1| coproporphyrinogen III oxidase [Anoxybacillus flavithermus WK1]
 gi|212560155|gb|ACJ33210.1| Coproporphyrinogen III oxidase [Anoxybacillus flavithermus WK1]
          Length = 383

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 189/378 (50%), Gaps = 10/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V  ++   + ++ + + EM+   +      + ++F GGG
Sbjct: 7   AAYIHIPFCTHICHYCDFNK-VFLHQQPVDAYLDALMIEMERTFERFPTSQLQTVFIGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I +   ++SNVE T+EANP  V        ++ GVNR+S GVQ+
Sbjct: 66  TPTSLTAKQLDRLLSAIHRTVPLASNVEFTVEANPDGVSDGQLYVLKQWGVNRLSFGVQT 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + LR +GR H    AI  I  A  + F  ++ DL+Y LP QT+ Q +  L    S  
Sbjct: 126 FDNELLRHIGRTHTKETAIETIERANELGFHNINIDLMYGLPTQTIDQLKETLHITFSLP 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L IE  T+FY + K   L LPS+     +Y +        G   YE+SN++ 
Sbjct: 186 IQHVSAYSLIIEPKTVFYNLMKKQALRLPSQEEEAQMYEIIMEQMEQRGYKQYELSNYAQ 245

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN+ YW    Y G G GAHS +    +  A  I+K    +++++ +     +  
Sbjct: 246 NGFNSRHNMTYWNNEYYYGFGAGAHSYMNGVRYVNAGPIKK----YIQLIERGQFPYINT 301

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
             +S E+Q +E + +GLR  EG++  ++    G+ +    +  +   +R G +E  +   
Sbjct: 302 HVVSKEEQMEEHMFLGLRKSEGVNKDEFFRRYGKTVHDVFDEAIALQKRNGLLEETE-EA 360

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T RG  + + V  + 
Sbjct: 361 IVLTHRGKLLGNEVFQSF 378


>gi|139473833|ref|YP_001128549.1| coproporphyrinogen III oxidase [Streptococcus pyogenes str.
           Manfredo]
 gi|134272080|emb|CAM30321.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pyogenes str. Manfredo]
          Length = 376

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 8   AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 63  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKITVLQRSAVNRISLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 123 NNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 243 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 298 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIARELQNQGLLVKDD-AFV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 357 RMTKKGLFLGDSV 369


>gi|320010886|gb|ADW05736.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           flavogriseus ATCC 33331]
          Length = 413

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 173/341 (50%), Gaps = 15/341 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G  S  LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  R
Sbjct: 25  LEGAASRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLVEEVRQAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV+   
Sbjct: 85  KVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLAEDAEITTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LAALREGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +  
Sbjct: 205 GESDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAD 264

Query: 241 SITSAHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +A G   YE+SN S       LHN  YWR  D+ G GPGAHS V      V     K
Sbjct: 265 EAMAAAGFSWYEVSNWSRTPEGRCLHNELYWRGADWWGAGPGAHSHVG----GVRWWNVK 320

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           HP ++ + + +       +E L  E +  E +++ LRL EG
Sbjct: 321 HPGAYAQALAEGRSPGAGREVLGDEDRRVERILLELRLVEG 361


>gi|167527175|ref|XP_001747920.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773669|gb|EDQ87307.1| predicted protein [Monosiga brevicollis MX1]
          Length = 463

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/288 (37%), Positives = 170/288 (59%), Gaps = 25/288 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV------------RRYKVGQENFIQSFLTEM-QWM 62
           + +L VYVHWPFC + C YCDF  +             R      +  +Q++  ++ Q +
Sbjct: 5   ARALAVYVHWPFCSRICTYCDFVKYPAIKQPAWFRGAGRGADPTHDEVLQAYRRQLTQLV 64

Query: 63  RQLTGP---RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVE 118
           +QL  P   R ++S++FGGGTPSL+ P  +  ++D +   +  SS+ VEIT+EANP ++ 
Sbjct: 65  QQLPSPNTQRQLTSLYFGGGTPSLMSPSLLRRLVDLVYTMFPPSSHPVEITLEANPDNIT 124

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
            +    ++ AG+NR+S+GVQ++ +  L+ LGR H+A  A+  +  A+++F    +S DL+
Sbjct: 125 RDTLARWQTAGINRLSIGVQAIRDPLLQALGRQHSAEVALRVVKQAQDVFGSTGVSLDLM 184

Query: 177 YALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + LP Q +  W  +L   L+     H+S+Y+LT+++GT+ Y   K G L +P  +   D 
Sbjct: 185 FGLPGQALDDWCTDLDHVLTELKPAHMSIYELTVKRGTILYHQTKLG-LKVPDPD---DY 240

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
           Y  TQ I SAHGL  YE+SN++      S HN+ YWR  DY+GIGPGA
Sbjct: 241 YFATQDICSAHGLERYEVSNYAQSPTMFSRHNMAYWRGTDYLGIGPGA 288


>gi|89889382|ref|ZP_01200893.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium BBFL7]
 gi|89517655|gb|EAS20311.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium BBFL7]
          Length = 377

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 181/336 (53%), Gaps = 9/336 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC + C YCDF+ S   +YK    + + +   E++  +      ++ +I+FGG
Sbjct: 3   GIYIHIPFCKQACHYCDFHFSTNMKYK---NDMVAALCEEIRLRKNEYEDTTVQTIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E   I  I+D + +N+ VS N EIT+EANP  +     +   ++ VNR+S+G+Q
Sbjct: 60  GTPSVLELSQINQIIDTVYQNYRVSDNPEITLEANPDDITSEKLEQLNESPVNRLSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  E+ L+ + R HNA EA++ I  A+  F  +S DLIY +P  T+ +W   + +A+   
Sbjct: 120 SFFEEDLKLMNRAHNAQEALSCIVQAQIYFDNISIDLIYGIPDMTVDRWRENIYKAIELG 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+E  T      + G +    + +A + +++       HG   YE SN   
Sbjct: 180 VPHISSYALTVEDNTALKSFIEKGLIPKVDDELAQEHFHILLDAMQLHGYSNYEFSNFGK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N  YW    YIGIGP AHS       R   +I  + + +LK ++ +    +E 
Sbjct: 240 EGYFSKNNTAYWTGKSYIGIGPSAHS---FDGKRRGWNINNNVK-YLKSIQAS-ELPIEI 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           E L++  + +E++M GLR   G+S+   E   G N 
Sbjct: 295 EELTTVDRYNEYVMTGLRTIYGVSLNKIEQEYGANF 330


>gi|227495111|ref|ZP_03925427.1| coproporphyrinogen dehydrogenase [Actinomyces coleocanis DSM 15436]
 gi|226831563|gb|EEH63946.1| coproporphyrinogen dehydrogenase [Actinomyces coleocanis DSM 15436]
          Length = 420

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 25/355 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGP 68
           + G+ S +L +Y+H PFC  +C YCDFN++   +  G +  ++ QS   E+    Q+  P
Sbjct: 21  VVGKTSKNLSLYIHVPFCKVRCGYCDFNTYTVGFGEGADISSYHQSVFREIDLAAQVLAP 80

Query: 69  ---RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                + S+F GGGTP++++ Q++A +L      ++ + N E+T EANP SV+  + +  
Sbjct: 81  YEHNPVQSVFVGGGTPTMLDAQHLAEVLGYARTKFSFAPNCEVTTEANPDSVDARSLETL 140

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G  R+S G+QS  +Q LR L R H+       +  A+      S DLIY  P +++ 
Sbjct: 141 AAGGFTRVSFGMQSAVKQVLRTLDRTHDPKRIQRVVKWAQQAGMDTSLDLIYGTPGESLV 200

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            WE  L  ALS   +H+S Y L IE+GT  +K  + G L +P  +     Y L   + S 
Sbjct: 201 DWEASLSAALSAGTEHISTYALVIEEGTKMWKDVQRGHLPMPDPDDEAAKYELADLLLSE 260

Query: 246 HGLHAYEISNHSFLGA-----------ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
            G   YEISN + L              S+HNL YWR  D+ GIGPGAHS   +G+ R  
Sbjct: 261 AGFAWYEISNWARLEPGESSGTTQLTYASVHNLAYWRDDDWWGIGPGAHSH--LGNLR-- 316

Query: 295 ISIEKHPESWLKMVRKN----GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
               KHP +W   + +       A   +E  ++E+  + FL+  +R  +G+ + +
Sbjct: 317 WWNRKHPRAWADALGRGESFLSPAQAGEELTAAERSLERFLLQ-IRTADGLGLSE 370


>gi|313888919|ref|ZP_07822579.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845092|gb|EFR32493.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 379

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 197/380 (51%), Gaps = 15/380 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           +N + +Y+H PFC  +C YCDF +S +   KV  E + +    E++        R I ++
Sbjct: 3   TNKISIYIHIPFCESRCHYCDFCSSLLSEPKV--EKYFKYLRKEIKLHEDFLRDRIIDTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS ++ + I  I+D ++  +  S N EI+IE+NP+S+       Y   G+NRIS
Sbjct: 61  FIGGGTPSSVDSRFIKEIMDDLSA-YNFSDNREISIESNPNSLTREKAVAYFSYGINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS  E+ L+ +GR H   +   AI  AR+  F  ++ DL+ ALP Q  +  E  ++ 
Sbjct: 120 IGTQSFNEEILKRIGRIHKKDDIYRAIENARSAGFENINLDLMLALPGQKFSDIEESIKE 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + H+S Y L +E+GT  ++ H+   L  P+E+    +Y+         GL  YEI
Sbjct: 180 VRELNLSHISYYSLILEEGTKLFRDHEKSPLSFPTEDEDRKMYHYVVDELKKIGLKQYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN+ YW+  DYI  G  A S ++   +  + + + + E+    + KN +
Sbjct: 240 SNFAKEGHECRHNMAYWKLRDYISFGLSASSNIRNLRYTNSYNFKDYYEA----LDKNEN 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIE 369
            +   E LS   + +EF+MMGLRL  G  + ++            D E E+NL+    + 
Sbjct: 296 PIGFSENLSKTNRMNEFVMMGLRLNSGFDLDEFNEKFNEEFLKIYDKEIEKNLKSNLIL- 354

Query: 370 RVQFSRLRCTQRGMTMLDSV 389
            ++ + LR T++G  + + V
Sbjct: 355 -LEDNNLRLTKKGRDLSNQV 373


>gi|15675037|ref|NP_269211.1| coproporphyrinogen III oxidase [Streptococcus pyogenes M1 GAS]
 gi|13622189|gb|AAK33932.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes M1
           GAS]
          Length = 376

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 202/372 (54%), Gaps = 15/372 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+  
Sbjct: 64  TAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLR 377
           L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +R
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDD-AFVR 357

Query: 378 CTQRGMTMLDSV 389
            T++G+ + DSV
Sbjct: 358 MTKKGLFLGDSV 369


>gi|317508577|ref|ZP_07966238.1| HemN protein [Segniliparus rugosus ATCC BAA-974]
 gi|316253121|gb|EFV12530.1| HemN protein [Segniliparus rugosus ATCC BAA-974]
          Length = 399

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 178/357 (49%), Gaps = 18/357 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--------Q 60
           ++++       GVYVH PFC  +C YCDFN++    ++G  +    +LT +         
Sbjct: 13  DSLSPSPDAPFGVYVHVPFCASRCGYCDFNTYTPG-ELGGRSGTGEWLTALGQELDLAAS 71

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +  GP ++ ++F GGGTPSL+    +A +LD I   + ++ ++E T EANP S    
Sbjct: 72  ALGRAGGPPTVRTVFVGGGTPSLLGAAGLARVLDAIGARFPMAESLEATCEANPESTSPA 131

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYAL 179
            F+G R AG  R+SLG+QS     L  L R H    A  A   AR +    ++ DLIY  
Sbjct: 132 FFEGIRAAGYTRVSLGMQSEAAHVLAVLDRAHTPGRATRAAQEARASGIEHVNLDLIYGT 191

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T       L   +   VDH+S Y LT+ +GT   +    G+L  P ++V  + + + 
Sbjct: 192 PGETEPDLARSLAAVVQAPVDHVSAYALTVHQGTAMGRAVAKGELAAPDDDVLAERHAMV 251

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A G   YE+SN +    A   HNL YW+ GD+ G GPGAHS V    + V     
Sbjct: 252 DEALAAAGFEWYEVSNWAKSPEARCRHNLGYWQGGDWWGAGPGAHSHV----NGVRWWNA 307

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           KHP     +       V   E L+ E++  E +M+ LR+REG++     +L G  LD
Sbjct: 308 KHPARHAALAASGRAPVAGFEALTDEERHTEDVMLRLRVREGVARA---VLRGPELD 361


>gi|313618877|gb|EFR90746.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria innocua FSL S4-378]
          Length = 385

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 188/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ M    GP   + ++
Sbjct: 11  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-MTAAKGPIAPVDTV 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I +   + + +E + EANP  + ++  Q  +  GVNRIS
Sbjct: 67  FVGGGTPTTLNEAQIARLCTAIQEILPLKNEIEFSFEANPGDLSISKLQAMQDHGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R + F  +S DLI++LP QT   ++  L++
Sbjct: 127 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKVGFENVSIDLIFSLPGQTEADFKDTLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 187 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLTEMEKHGRKQYEI 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N  
Sbjct: 247 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENKL 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 303 PTFQQKELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQDLDTTFAHAIQK 353


>gi|308174338|ref|YP_003921043.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens DSM 7]
 gi|307607202|emb|CBI43573.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens DSM 7]
          Length = 379

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 183/353 (51%), Gaps = 10/353 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC   C YCDFN +  + +   E ++ S   EM    + TG   + +IF GGGT
Sbjct: 4   AYIHIPFCEHICHYCDFNKYFIQSQPVDE-YLNSLEKEMINTIERTGRPDLRTIFIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ + P  +  ++D I +    S   +E   EANP  +     +  + AGVNR+S GVQ+
Sbjct: 63  PTSLSPDQLEKLMDSIHRVLKPSDGLIEFAAEANPDDLSPEKLKIMKNAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E++ L+ +GR H   +   +   AR + F  +S DL++ LP QT+   +  ++ ALS  
Sbjct: 123 FEDELLQKIGRVHKQKDVFTSFERARALGFDNISLDLMFGLPGQTLADLDNSVKTALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L +E  T+FY + + G L LP++    ++Y       S  G+  YEISN + 
Sbjct: 183 AEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQEQEAEMYETVMRQMSEAGIRQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +  G+  V     KH   +++++ + G    + 
Sbjct: 243 PGYESQHNLTYWSNEAYFGFGAGAHGYIS-GTRTVNAGPVKH---YIQLIEEKGLPYRDT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFI 368
             ++ E+Q +E + +GLR   G+  + +    GR++D    +  ++L  +G I
Sbjct: 299 HEVTREEQIEEEMFLGLRKMSGVQKQAFLDKFGRSVDELFPDVLKDLTEKGLI 351


>gi|227551717|ref|ZP_03981766.1| Coproporphyrinogen dehydrogenase [Enterococcus faecium TX1330]
 gi|257895684|ref|ZP_05675337.1| coproporphyrinogen III oxidase [Enterococcus faecium Com12]
 gi|293377706|ref|ZP_06623895.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium PC4.1]
 gi|227179158|gb|EEI60130.1| Coproporphyrinogen dehydrogenase [Enterococcus faecium TX1330]
 gi|257832249|gb|EEV58670.1| coproporphyrinogen III oxidase [Enterococcus faecium Com12]
 gi|292643706|gb|EFF61827.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium PC4.1]
          Length = 388

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 173/335 (51%), Gaps = 10/335 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
             N +  Y+H PFC   C YCDFN   + +  GQ  + +++  L EM+ M +     ++ 
Sbjct: 8   AENKVSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +        E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQDGKEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMKFLKAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLKLPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGNIRYRNKGPI----QHYLRPLRIN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              V+E+E L+ + Q +E + +GLR + GI+ K +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGIAKKHF 335


>gi|308235153|ref|ZP_07665890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gardnerella vaginalis ATCC 14018]
          Length = 439

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 175/353 (49%), Gaps = 29/353 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VYVH PFC+++C YCDFN++  R       +E +    + EM+ +++      +  P++ 
Sbjct: 23  VYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAILEMRLVKKWQEFHGIFEPKA- 81

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTP++++ Q++  IL  I   W +    EIT EANP + + +  +   + G  
Sbjct: 82  QSVFFGGGTPTVLKAQDLVRILQEIRNLWGIMPGAEITTEANPDTADESYIETLAEGGFT 141

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L+ L R H        +  A     R S DLIY  P +++  W   +
Sbjct: 142 RISFGMQSAVPHVLKTLDRTHTPENVERGVKTADACGLRSSVDLIYGAPGESLDDWRKSV 201

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + ALS  V+H+S Y LT+E  T   +    G +  P ++     Y +   + ++ GL  Y
Sbjct: 202 EMALSLGVNHVSAYALTVEPRTKMGRQIAAGTIHAPDDDDEAAKYEVADELFNSAGLEWY 261

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK------------ 299
           EISN +  G ES HNL YW+  D+ GIGPGAHS     S     S++             
Sbjct: 262 EISNWARTGFESQHNLGYWKNIDWAGIGPGAHSHYNSVSGISKQSMDDCALLADSSKFYN 321

Query: 300 -------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                  HP+ W   +          E ++SE    E +M+GLR+REG+S+ +
Sbjct: 322 LRSWDILHPKRWAHAINAGNVPWQNYECINSEDALIEEVMLGLRIREGLSIDE 374


>gi|46446730|ref|YP_008095.1| coproporphyrinogen III oxidase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400371|emb|CAF23820.1| putative oxygen-independent coproporphyrinogen III oxidase, hemN
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 385

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 196/384 (51%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISS 73
           S+ + +Y H PFC KKC YC F     +  +  +  I     +++W R L     + I S
Sbjct: 9   SSEISLYFHIPFCTKKCNYCHFYVLPDQEPLKNQLLIA---LKLEWKRMLPLLINKCIIS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           I+FGGGTPSL  P  I  +L+ I ++     S  EIT+E NP +   +  + Y +AG+NR
Sbjct: 66  IYFGGGTPSLFSPDRIQAVLETIHQDLPFDYSTTEITLEVNPENGYFSLMRAYAQAGINR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+Q+L+++ L  LGR H+ S A  + +         +S DL+Y LP+Q++  WEM L
Sbjct: 126 VSIGIQTLDQELLHLLGRLHSPSLAKRSVLETYEAGITNLSIDLMYDLPRQSLKHWEMTL 185

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q   +  + HLSLY LTIE  T+F+K       +LP E  ++ +YN      ++ GL  Y
Sbjct: 186 QEIGTLPLSHLSLYNLTIEPFTVFFKKQNFVRPLLPDEETSLAMYNAAIEHLTSFGLEQY 245

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EIS  +  G  S HN  YW    +IG GP A S  +    R   +++K+ +S    +  N
Sbjct: 246 EISAFAKPGFYSKHNTGYWLARPFIGFGPSAFSYWEGKRFRNVANLKKYHQS----LTLN 301

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR--NLDIECERNLQRQGFIE 369
              +   E L       E  ++ +RL +GIS+ D+E   G+     +E        GF+ 
Sbjct: 302 QSPIDFNEQLDPIAHLKELFVIQIRLCQGISIADFEQRHGKLSQETLETIEQFILDGFLT 361

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           +     L  T++G+   D+V + L
Sbjct: 362 QSN-QILSLTKKGVLFYDTVASEL 384


>gi|217964378|ref|YP_002350056.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes HCC23]
 gi|217333648|gb|ACK39442.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria monocytogenes HCC23]
 gi|307571057|emb|CAR84236.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes L99]
          Length = 385

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 190/358 (53%), Gaps = 13/358 (3%)

Query: 12  TGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           T   SN S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP
Sbjct: 4   TNHSSNESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKGP 59

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  + 
Sbjct: 60  IAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQD 119

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   
Sbjct: 120 HGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEAD 179

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    H
Sbjct: 180 FQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKH 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++
Sbjct: 240 GRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YME 295

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            ++KN     +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 296 PLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDTTFANAIQK 353


>gi|170760466|ref|YP_001788275.1| coproporphyrinogen III oxidase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407455|gb|ACA55866.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 380

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L + +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFVHSFKIARKEGFNNINVDLMFALPNQSLDDWKETLLKVVDL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+ T F+ ++++  L LP E     +Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEETTFHNLYENSLLKLPKEEEERKMYEYCIDFLKEKGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTNSI----ETYIKEINSNNLTRIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|256825009|ref|YP_003148969.1| coproporphyrinogen III oxidase, anaerobic [Kytococcus sedentarius
           DSM 20547]
 gi|256688402|gb|ACV06204.1| coproporphyrinogen III oxidase, anaerobic [Kytococcus sedentarius
           DSM 20547]
          Length = 411

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 197/392 (50%), Gaps = 25/392 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQW-MRQLTGPR 69
            +  +Y+H PFC  +C YCDFN++    ++G E       ++     E+   +R LT   
Sbjct: 27  ETFSLYLHVPFCSVRCGYCDFNTYTL-TELGDETGASLDTWVDGVAAELDLAVRVLTADG 85

Query: 70  S----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                + ++F GGGTPSL+  +++   L+ + + + V+ ++E+T EANP  V+     G 
Sbjct: 86  GALPVVDTVFVGGGTPSLLGAEDLGRALEVVRERFAVAEDLEVTTEANPDQVDEEFAWGL 145

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            +AG  R+S+G+QS     L  L R H+ +    A+   R     +S DLI+  P +++ 
Sbjct: 146 AEAGYTRMSVGMQSAVPHVLATLDRTHDPANVERAVEAGRAAGLAVSVDLIHGTPGESLV 205

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   ++ A++   DH+S Y LTIE+GT  ++    G+L  P E+   D Y L   +  A
Sbjct: 206 DWRASVEAAIALRPDHVSAYALTIEEGTALHRRVARGELPEPDEDDQADKYELADDLLGA 265

Query: 246 HGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            G   YE+SN +   A    HN +YW  G + G+GPGAHS V      V     KHP +W
Sbjct: 266 AGYGWYEVSNWARTEAGRCRHNEHYWDGGHWWGVGPGAHSHVG----GVRFWNVKHPRAW 321

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            + +         +E L++EQ  +E +M+G+R REG+++ D     GR         L  
Sbjct: 322 AQRLSTGVTPAAAREVLTAEQVTEERVMLGIRRREGLALDDVPA-EGRG----AVAALIG 376

Query: 365 QGFIE---RVQFSRLRCTQRGMTMLDSVIANL 393
            G +E    V+  RL  T+RG  + D V+  L
Sbjct: 377 DGLLEGVPAVRDRRLVLTRRGRLLADLVMGRL 408


>gi|170757805|ref|YP_001782595.1| coproporphyrinogen III oxidase [Clostridium botulinum B1 str. Okra]
 gi|169123017|gb|ACA46853.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B1 str. Okra]
          Length = 380

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 181/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L + +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLKVVGL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNNLTQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|326381607|ref|ZP_08203301.1| coproporphyrinogen III oxidase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199854|gb|EGD57034.1| coproporphyrinogen III oxidase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 407

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 19/344 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-----QWMRQLT 66
           T   +  L +Y+H PFC  +C YCDFN++    ++G  +  QS++  +     Q    L 
Sbjct: 20  TADAARPLSLYLHVPFCATRCGYCDFNTYTA-GELGSSSSPQSWMEGVRAELDQAAALLA 78

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R +S++F GGGTPSL+  Q +A +LD +  ++ ++   E+T E+NP S     F   R
Sbjct: 79  RGREVSTVFVGGGTPSLLGGQGLARLLDAVRDSFDLAPGAEVTTESNPESTSPEFFGALR 138

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
            AG  RISLG+QS     L  L R H    A+ A   A    F  ++ D+IY  P +  T
Sbjct: 139 DAGFTRISLGMQSAAPHVLAVLERTHTPGRALDAAREASAAGFEHVNLDMIYGTPGERDT 198

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                L   LS  VDH+S Y L +E GT F +  + G++ +P ++V    Y +  +  S 
Sbjct: 199 DLRETLDAVLSVPVDHVSAYALIVEDGTRFARKVRRGEVPMPDDDVLAARYEMIDARLSE 258

Query: 246 HGLHAYEISNHSFLGAESL--------HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            G+  YE+SN +   A+SL        HN  YWR  D+ G+GPGAHS V    + V    
Sbjct: 259 AGMTWYEVSNWARAQADSLPAPQSVCRHNEAYWRSDDWWGVGPGAHSHV----NGVRWWN 314

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           +KHP ++   +      +  +E LS      E +M+ LR+R+G+
Sbjct: 315 QKHPATYSASLADGALPIGGQEILSEADIHTESVMLRLRMRDGL 358


>gi|291538366|emb|CBL11477.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseburia intestinalis XB6B4]
          Length = 409

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 201/398 (50%), Gaps = 34/398 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G   L +Y+H PFCV+KC YCDF S        Q  ++++   E+ +         +S++
Sbjct: 2   GKKELELYIHIPFCVRKCNYCDFLSFPADEDT-QRQYVKALCKEISYYGAHCRDYVVSTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +   ++A ILD I K++++    E++IE NP +V    F  YR++G+NRIS
Sbjct: 61  YIGGGTPSWLWESDMAAILDAIQKSFSLLPEAEVSIECNPGTVTAQKFAVYRQSGINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS +   L+ LGR H   + +    LAR   F  ++ DL+ +LP Q M  +   LQ+
Sbjct: 121 LGLQSAQNVELKMLGRIHTWEQFLKTYELARAGGFSNINVDLMSSLPGQHMESYADSLQK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL---------VLPSENVAVDLYNLTQSITS 244
                 +H+S Y L IEKGT FY ++K   +          LP+E+   ++  LT  +  
Sbjct: 181 VCRLKPEHISAYSLIIEKGTPFYDLYKFDAVKQRAGMATDALPTEDEVYEMTQLTGQMLK 240

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----------------KV 288
            +G   YE+SN +  G    HN+ YW   +Y+G+G GA S +                +V
Sbjct: 241 ENGYVHYEVSNFAQPGYACRHNIGYWTRVNYLGLGLGASSLMENIRYTNTRDLYTYLEQV 300

Query: 289 GSHRVAISIEKHPESWL-KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              R  I   KH +  + ++   N HA  E   +    Q +EF+ +GLR+ +G+S  D+ 
Sbjct: 301 EVIREGIWENKHDDGTVEQLTATNLHASAES--VGKYAQMEEFMYLGLRMIDGVSRDDFM 358

Query: 348 MLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRG 382
              G  ++    E   +LQ +  +ER +  R+  T RG
Sbjct: 359 HSFGMPIEAVYQEVLNHLQEEELLER-RAGRIYLTPRG 395


>gi|25010961|ref|NP_735356.1| coproporphyrinogen III oxidase [Streptococcus agalactiae NEM316]
 gi|77413171|ref|ZP_00789370.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus agalactiae 515]
 gi|23095340|emb|CAD46551.1| unknown [Streptococcus agalactiae NEM316]
 gi|77160789|gb|EAO71901.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus agalactiae 515]
          Length = 376

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 205/378 (54%), Gaps = 15/378 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++Q+ + E +    +T  R++   + GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDAYLQALIREFRSY-DITELRTL---YIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + ++  +++  E TIEANP  + V+  +  +K+ VNR+SLGVQ+  
Sbjct: 64  TSISAVQLDYLLTELIRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +ALS  + 
Sbjct: 124 DKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNARLSEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLR 377
           LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++      ++
Sbjct: 299 LSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENN-GFIQ 357

Query: 378 CTQRGMTMLDSVIANLAV 395
            T++G+ + D+V     V
Sbjct: 358 MTKKGLFLGDTVAEKFIV 375


>gi|47095429|ref|ZP_00233039.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 1/2a F6854]
 gi|254898358|ref|ZP_05258282.1| coproporphyrinogen III oxidase [Listeria monocytogenes J0161]
 gi|254912150|ref|ZP_05262162.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936478|ref|ZP_05268175.1| hemN [Listeria monocytogenes F6900]
 gi|47016250|gb|EAL07173.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258609071|gb|EEW21679.1| hemN [Listeria monocytogenes F6900]
 gi|293590122|gb|EFF98456.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 385

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP   + ++
Sbjct: 11  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTVAKGPIAPVDTV 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS
Sbjct: 67  FVGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   ++  L++
Sbjct: 127 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 187 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEI 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ ++KN  
Sbjct: 247 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQKNIL 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 303 PTFQQKELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDATFANAIQK 353


>gi|116495050|ref|YP_806784.1| coproporphyrinogen III oxidase [Lactobacillus casei ATCC 334]
 gi|191638553|ref|YP_001987719.1| coproporphyrinogen III oxidase [Lactobacillus casei BL23]
 gi|227534939|ref|ZP_03964988.1| coproporphyrinogen dehydrogenase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|301066613|ref|YP_003788636.1| coproporphyrinogen III oxidase-like Fe-S oxidoreductase
           [Lactobacillus casei str. Zhang]
 gi|116105200|gb|ABJ70342.1| coproporphyrinogen III oxidase, anaerobic [Lactobacillus casei ATCC
           334]
 gi|190712855|emb|CAQ66861.1| HemN protein [Lactobacillus casei BL23]
 gi|227187396|gb|EEI67463.1| coproporphyrinogen dehydrogenase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|300439020|gb|ADK18786.1| Coproporphyrinogen III oxidase related Fe-S oxidoreductase
           [Lactobacillus casei str. Zhang]
          Length = 381

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 189/383 (49%), Gaps = 16/383 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G Y+H PFC   C YCDFN   + +  GQ  ++++   L EM+ +        I +++ G
Sbjct: 3   GAYLHIPFCEHICYYCDFN---KVFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIQTVYVG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLG 136
           GGTPS + P  +A +  GI          E T EANP+ +      Q     GVNR+S+G
Sbjct: 60  GGTPSTLTPTQLATLCQGIHDILHFDQG-EFTFEANPNDLLTTEKLQVLHDYGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  +  LR +GR H A +   AI  AR + F  +S DLI+ LP Q+   +   LQ+AL
Sbjct: 119 VQSFNDDVLRRIGRIHRAKDVYTAIANARQVGFDNISIDLIFRLPDQSRDDFLTSLQKAL 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN
Sbjct: 179 ALDLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +  HNL YWR   Y G G GA   +    +     I++    +L  +  +   V
Sbjct: 239 FAKDGYQCEHNLLYWRNDKYFGFGAGAFGYLGRDRYHNYGPIKQ----YLTPLHADHLPV 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
           +E   +   +Q +E + +GLR  +G+S   +       +D    E    L  QG + R Q
Sbjct: 295 LEHHLVPQSEQIEEEMFLGLRTMQGVSEARFYDRYHMTVDAIYGETVPELVSQGLVVR-Q 353

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +R T +G  + + V     +
Sbjct: 354 DGYIRLTNKGKFLGNEVFQRFLI 376


>gi|225851366|ref|YP_002731600.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Persephonella marina EX-H1]
 gi|225644996|gb|ACO03182.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Persephonella marina EX-H1]
          Length = 366

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 203/375 (54%), Gaps = 14/375 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S     K     +I++   E+   ++L     + +++FGGG
Sbjct: 4   GLYIHIPFCSIKCPYCDFVSITSDDKGLHRRYIEALKKEILLYKELD--FDLETVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P+ ++  +  I    +V  + EIT+E NP +    +F+  ++AGVNRIS+GVQS
Sbjct: 62  TPSLLDPELLSEFIYFIKDQISVVESPEITVEVNPKTYRYEDFRIIKEAGVNRISIGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++LR LGR+H+  ++  A+    ++    ++ DLIY +  Q++   E +L+   S  
Sbjct: 122 FLERNLRMLGRDHSVKDSYKAVEDCLKSGIENINLDLIYGIQNQSLKDLEKDLEIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT  +GT F +  ++G   L  E+   D++ L  S     G   YE+SN S 
Sbjct: 182 VKHISAYMLTPYEGTPFEQSVREGVYRLKDEDELYDMFVLINSYLETQGFLRYELSNWSK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +  HNL YW++  ++GIG  A S   +   R   +   + + +L+ + K     V  
Sbjct: 242 EGYQCRHNLFYWKHVPFLGIGVSAWSY--INGKRSGNT--GNLKEYLEKIEKGKKPAVFS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E +   +   E + +GLRLREG+ VK    L+G+ LD   E   +  G I+     R   
Sbjct: 298 ETIDKSEFLKEKIFLGLRLREGVPVK---YLSGK-LDSVEELVSENFGLIDG---DRFIL 350

Query: 379 TQRGMTMLDSVIANL 393
           T++G+ +++ +++ L
Sbjct: 351 TEKGLMVINRIVSLL 365


>gi|282850168|ref|ZP_06259547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella parvula ATCC 17745]
 gi|282579661|gb|EFB85065.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella parvula ATCC 17745]
          Length = 399

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 195/359 (54%), Gaps = 12/359 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQL--TGPRSISSI 74
            +G+YVH PFC +KC YCDF ++ +  +   E ++ + + E+  W+ +   +  ++I +I
Sbjct: 20  DMGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEIDLWISEHPESTSKAIDTI 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP+ +  Q + +ILD I   +T++ +  +TIE+NP  V ++      + G NRIS
Sbjct: 79  YFGGGTPTELSIQQLQMILDKIKNTFTITDDCHMTIESNPGEVNLHYLTKLVELGFNRIS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+Q+    +  L  
Sbjct: 139 FGVQTFDDKALTMLHRSHNGKQAKQAVYDAKEAGFADINIDLIYGLPRQSSDDIQHNLDI 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                ++H+S Y L +E GT  Y + +   + +PSE +   +Y++        G   YEI
Sbjct: 199 VKDLPINHISTYGLQVEVGTYLYHLVQKNLISIPSETIDEVMYDMMMDGLKELGFERYEI 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +   + S HNL YW Y DY+G G GAHS    G  R   S  ++   +++ V +   
Sbjct: 259 SNFAKANSYSRHNLKYWHYVDYLGFGAGAHSFYD-GVRR---SNNRNVMPYIQSVDRYIM 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIE 369
             ++ E ++ E+  ++F  + LR + G+  + +E   G    +L     ++L  +G +E
Sbjct: 315 PTIDTETITLERAQEDFCFLALRTKWGLDEQKFEDKFGVSIHDLFATTLKDLVSKGLLE 373


>gi|297617819|ref|YP_003702978.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145656|gb|ADI02413.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 378

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 206/379 (54%), Gaps = 20/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +YVH PFCV+KC YCDF S V  ++     +++    E++   R L    ++ +++ GGG
Sbjct: 5   IYVHIPFCVRKCRYCDFYS-VSYHEELVARYVKCLCAEIEERARDLQQAEAVRTLYLGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P  +A I+D I   + +    EIT+E NP +V +     YR AG+NR+SLGVQS
Sbjct: 64  TPSLLDPACVATIIDKIGSVFGILPEAEITLEVNPGTVNLKKMASYRHAGINRVSLGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L++LGR H+  +   A  +  +  F  +S DL+Y +P Q +++W   L  AL+  
Sbjct: 124 FFDDILQWLGRLHSRQDVKTAFDVCLKAGFDNISIDLMYGVPGQDLSRWREGLDNALALN 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y L  E  T   +    G++ L SE   +  Y L   + +  G   YE+SN + 
Sbjct: 184 PQHVSAYLLQPEADTPLGRSVAAGEVELLSEEEELAQYELAVDVLTGAGYRHYELSNFAR 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNLNYW+ G Y+GIG GA S +K+  ++   +++ + +S L    +   +V+  
Sbjct: 244 PGYECCHNLNYWQGGQYLGIGAGAVSFLKLNRYQNDPNVDAYIQS-LSAATQPPRSVL-- 300

Query: 319 EFLSSEQQADEFLMMGLRLREGISVK--------DWEMLAGRNLDIECERNLQRQGFIER 370
           E L+ E    + +++GLRL +GI V+        D+ +L G ++D      L   G I+R
Sbjct: 301 ECLNEEGIVRDRIVLGLRLMDGIDVEGLKRSYEVDFSLLFGSSVD-----RLIELGLIKR 355

Query: 371 VQFSRLRCTQRGMTMLDSV 389
            + S+L  +++G  + + V
Sbjct: 356 -KGSKLCLSRKGYFLSNEV 373


>gi|71910578|ref|YP_282128.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS5005]
 gi|71853360|gb|AAZ51383.1| coproporphyrinogen oxidase [Streptococcus pyogenes MGAS5005]
          Length = 398

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 30  AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 84

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 85  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 144

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 145 NNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 204

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 205 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 264

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 265 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 319

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 320 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVKDD-AFV 378

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 379 RMTKKGLFLGDSV 391


>gi|329728457|gb|EGG64894.1| putative coproporphyrinogen dehydrogenase [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 385

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 170/322 (52%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L L +E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLANEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 306

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 307 PSLTERMEEEMFLGLRLNEGVS 328


>gi|16800581|ref|NP_470849.1| coproporphyrinogen III oxidase [Listeria innocua Clip11262]
 gi|16413986|emb|CAC96744.1| hemN [Listeria innocua Clip11262]
          Length = 385

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 188/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ M    GP   + ++
Sbjct: 11  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-MTAAKGPIAPVDTV 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I +   + + +E + EANP  + ++  Q  +  GVNRIS
Sbjct: 67  FVGGGTPTTLNEAQIARLCTAIREILPLKNEIEFSFEANPGDLSISKLQAMQDHGVNRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R + F  +S DLI++LP QT   ++  L++
Sbjct: 127 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKVGFENVSIDLIFSLPGQTEADFKDTLKQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 187 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLTEMEKHGRKQYEI 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N  
Sbjct: 247 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENKL 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 303 PTFQQKELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQDLDTTFAHAIQK 353


>gi|188997347|ref|YP_001931598.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932414|gb|ACD67044.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 368

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/325 (34%), Positives = 177/325 (54%), Gaps = 7/325 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S V +    ++ ++++   E+  +  L     I +I+FGGG
Sbjct: 4   GIYIHIPFCNIKCPYCDFTSFVWQEDKLKDRYVEALKKEL--LMYLDNDFDIQTIYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++P+ IA I++ I  N     N+EIT+E NP + E N F+  + AGVNRIS+G QS
Sbjct: 62  TPSTLKPEKIAEIIEFIKNNVKHQKNLEITVEINPKTYEYNEFKIIKDAGVNRISIGNQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++L  LGR+H   ++   I +  +     ++ DLIY +  QT+   E +L+   S  
Sbjct: 122 FVEKNLTMLGRDHKPEDSYKTIENCLKAGISNINLDLIYGIQNQTLQDLEKDLEIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT  + T    + + G   LP E++A  ++ +            YE+SN + 
Sbjct: 182 ITHISAYMLTAYEDTPLGTLVEKGLYHLPDEDLAYQMFLMIDQALHNKSFERYELSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++GIG  A S   V + R   +  K+   +L+ V K    V   
Sbjct: 242 KGYECKHNLFYWTDVNFLGIGVSAWSY--VNNERFGNT--KNINEYLENVEKGIKPVKFS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISV 343
           E L  +++ +E + +GLRL+EGI V
Sbjct: 298 EVLDEKKKHEEKIFLGLRLKEGIDV 322


>gi|88195392|ref|YP_500196.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|87202950|gb|ABD30760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
          Length = 374

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 170/322 (52%), Gaps = 12/322 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RILKTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+ +
Sbjct: 62  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L L +E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLANEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++    
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAILVSNK 295

Query: 321 LSSEQQADEFLMMGLRLREGIS 342
            S  ++ +E + +GLRL EG+S
Sbjct: 296 PSLTERMEEEMFLGLRLNEGVS 317


>gi|163787295|ref|ZP_02181742.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteriales bacterium ALC-1]
 gi|159877183|gb|EDP71240.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteriales bacterium ALC-1]
          Length = 377

 Score =  196 bits (497), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 196/380 (51%), Gaps = 17/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +++ I +   E++  +      ++ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKKKDDLINALSKELELRKDDFKKTTVKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    +  I++ + KN+ VS + EIT+EANP  +  +         +NR+S+G+QS
Sbjct: 61  TPSLLTNDELQYIINSVYKNYKVSEDPEITLEANPDDLSKDRIIDLAHTPINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L+ + R HNA EA   +++A   F  +S DLIY +P  +  QW   ++ ALSY V
Sbjct: 121 FFEADLKLMNRAHNAKEAKECLYVATQYFDNISLDLIYGIPGASNEQWLANIEMALSYNV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            H+S Y LT+E  T      K G +  +  E      Y L + + ++  +H YE+SN   
Sbjct: 181 PHISSYALTVEPKTALAAFIKKGIIEDVDDEQAHEQFYILKEKLEASDFVH-YELSNFGK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N  YW+   YIGIGP AHS       +   ++  + + ++K +++N    +E 
Sbjct: 240 DGFFSKNNSAYWKGKSYIGIGPSAHS---FNGKQRGWNVSNNSK-YIKAIQQN-ELPIEI 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIER----VQF 373
           E L++  Q +E++M GLR   G+S    E   G    D   E   Q + FI +    +  
Sbjct: 295 ETLTTTDQYNEYIMTGLRTIWGVSFVKVENDFGTTFKDYLIE---QSEVFINQHLLYIDD 351

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T++G  + D + + L
Sbjct: 352 EHLRVTKKGQFLSDGIASEL 371


>gi|288927608|ref|ZP_06421455.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330442|gb|EFC69026.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 317 str. F0108]
          Length = 384

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 203/388 (52%), Gaps = 23/388 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-------TGPRSIS 72
           G+Y+H PFC  +C YC F  +       Q+  +Q+  +E+   R         +   +I 
Sbjct: 3   GIYIHVPFCASRCIYCAF--YTTTTLSSQDRLVQALCSELAMRRDYLLDKAFPSSAITID 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKN------WTVSSNVEITIEANPSSVEVNNFQGYR 126
           +I+ GGGTPS +  QN+  + D I         + +S NVE+TIE NP  +     Q   
Sbjct: 61  TIYLGGGTPSQLSEQNLQRLFDTIYNKEQQLPAFHISPNVEVTIECNPDDITPQFAQTIS 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +  VNRIS+GVQ+  ++ L FL R H A++   AI   R +    +S DLI+  PKQT+ 
Sbjct: 121 RLPVNRISMGVQTFSDERLTFLRRRHKATDIAPAIERLRQVGINNISIDLIFGFPKQTLD 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +W ++LQ A+   V+H+S Y L  E+GT  +++ +   +    +N+++D++NL      A
Sbjct: 181 EWAIDLQNAIELGVEHISAYSLMYEEGTPLFRLLQQQRVSEIDDNLSLDMFNLLVDTLVA 240

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           +    YEISN +  G  S HN +YW+   Y+G+GP AHS           ++ K+ ++  
Sbjct: 241 NNYEHYEISNFAREGFRSRHNASYWQAIPYLGLGPSAHSYDGNSRQWNVSNLRKYMDAI- 299

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
               +NG   +E+E L+ + + ++++   LR +EG+ +      A R   +E   +  +Q
Sbjct: 300 ----ENGILPMEREVLNEDTKYNDWITTALRTKEGLDLNRLSN-AHRQYLLEAAEHHLKQ 354

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +  +  + +  ++ G+ + DSV+++L
Sbjct: 355 GHLV-LSGNNIALSRTGIFISDSVMSDL 381


>gi|225848118|ref|YP_002728281.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643601|gb|ACN98651.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 367

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 193/377 (51%), Gaps = 15/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S V      +E ++ +   E+   + L     + +++FGGG
Sbjct: 4   GLYIHIPFCEIKCPYCDFTSFVWNEDSLKEKYVSTLKKELSLYQNLD--FELETVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS + P  +   +  I +N      +EIT+E NP +    +F+  + AGVNRIS+G QS
Sbjct: 62  TPSSLSPDLLVDTIQFIKENTKTKKELEITVEVNPKTYRYKDFKILKDAGVNRISIGNQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++L  LGRNH   + +  +    N     ++ DLIY +  QT+   E +L+   S  
Sbjct: 122 FIEKNLISLGRNHKPKDTLQTVEDCLNAGITNINLDLIYGIQGQTLDDLEEDLKIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT  +GT    + K+G   LP E   + ++ L  S     G   YE+SN + 
Sbjct: 182 ITHISAYMLTPYEGTPLGTLVKNGCYNLPDEETTLKMFELIDSFLEEKGFERYELSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++GIG  + S V    + V     K+ + +L +V K+   V  K
Sbjct: 242 EGYECKHNLFYWTDIEFLGIGVSSWSYV----NNVRFGNTKNIQEYLNLVEKSIKPVKFK 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  E++ +E + + LRL+ G+   D  ++  +++     + L  +G+   V+  +L  
Sbjct: 298 EELDQEKKIEEKIFLSLRLKSGL---DLNLIKNKDII----KELVEEGY-ATVKNEKLTL 349

Query: 379 TQRGMTMLDSVIANLAV 395
             +G+ +L+ +   L +
Sbjct: 350 LPKGIMVLNEITVKLVL 366


>gi|270308162|ref|YP_003330220.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. VS]
 gi|270154054|gb|ACZ61892.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. VS]
          Length = 378

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 173/330 (52%), Gaps = 10/330 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIF 75
           NSL +Y+H+PFC+KKC YC F S+  R +      I  ++  +Q   +L T      S++
Sbjct: 4   NSLALYMHFPFCLKKCGYCSFVSYTNRLE-----HISDYVNCLQKEIKLRTDGLCFHSLY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  IA I+ GI  +  +  + E+T+EANP  + +   +   + G+NR+SL
Sbjct: 59  FGGGTPSLLSPAQIADIISGIKTSARILPDAEVTLEANPGILTLQYLEQINRLGINRLSL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR HN ++A      AR   F  ++ DLIY LP  T+  ++  L   
Sbjct: 119 GIQSFSDAELAVLGRLHNTTQARDVYKKARAAGFDNINLDLIYGLPHSTLLSFKTNLNEV 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L  A +H+SLY LT+E+ T  Y   + G L      +A D Y L + +    G   YEIS
Sbjct: 179 LKLAPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLDNAGYRHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +SLHNL YW+   Y+G+G   HS  +       I+++++   W          
Sbjct: 239 NWAKPGYQSLHNLTYWQNRPYLGLGVAGHSFFQNCRTANDINLDEYLFCWQNNCPPEPSE 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +  +      Q  E +++GLRL  G+S +
Sbjct: 299 NIHVDL---ANQLAETIILGLRLDNGVSAE 325


>gi|313623722|gb|EFR93868.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria innocua FSL J1-023]
          Length = 399

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ M    GP   + ++
Sbjct: 25  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-MTAAKGPIAPVDTV 80

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    IA +   I +   + + +E + EANP  + ++  Q  +  GVNRIS
Sbjct: 81  FVGGGTPTTLNEAQIARLCTAIQEILPLKNEIEFSFEANPGDLSISKLQAMQNYGVNRIS 140

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L+ +GR H   +   ++   R + F  +S DLI++LP QT   ++  L++
Sbjct: 141 MGVQSFNNELLKKIGRIHTVKDVYQSVENMRKVGFENVSIDLIFSLPGQTEADFKDTLKQ 200

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEI
Sbjct: 201 ALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLTEMEKHGRKQYEI 260

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ ++ N  
Sbjct: 261 SNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQDNKL 316

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 317 PTFQQKELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQDLDTTFAHAIQK 367


>gi|71903409|ref|YP_280212.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS6180]
 gi|71802504|gb|AAX71857.1| coproporphyrinogen oxidase [Streptococcus pyogenes MGAS6180]
          Length = 408

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 40  AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 94

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 95  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 154

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 155 NNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 214

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 215 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 274

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 275 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 329

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 330 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVKDD-AFV 388

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 389 RMTKKGLFLGDSV 401


>gi|319953520|ref|YP_004164787.1| oxygen-independent coproporphyrinogen iii oxidase [Cellulophaga
           algicola DSM 14237]
 gi|319422180|gb|ADV49289.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           algicola DSM 14237]
          Length = 378

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 198/378 (52%), Gaps = 13/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +E  + +   E+   +       +++I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMGKKEAMLSAIKRELVLRKSEFKNEVVATIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  I++ +  N++V    EIT+EANP  +  +  +   K+ +NR+S+GVQS
Sbjct: 61  TPSVLSTEEIQGIINSVYANYSVVEGPEITLEANPDDLSEDKIRVLSKSPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HN+ EA  ++ +A + F  +S DLIY LP  +  +WE  +  ALS+ V
Sbjct: 121 FFEEDLKMMNRAHNSKEAKKSLEIATHYFSNISIDLIYGLPGMSNQRWEENIALALSFGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T      K G +    + VA   +N+      A+GL AYE SN    
Sbjct: 181 PHISSYALTVEPKTALANFIKKGIIKPVDDEVASAHFNILLREMEANGLDAYETSNFGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW    YIG+GP AHS   +   R   +I  + +    +   N    +E E
Sbjct: 241 GFYSENNTAYWLGKKYIGVGPSAHSYDGI---RRGWNINNNAKYINALA--NDQLPMEVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            LS   + +E++M GLR   G+S+     D+     + L  + E++++++  +  V+   
Sbjct: 296 VLSETDRYNEYVMTGLRTIWGVSLTRIYSDFGANFHKYLLQQAEKHIKQELLV--VENDT 353

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T++G  + D + ++L
Sbjct: 354 LITTKKGKFLADGIASDL 371


>gi|50914136|ref|YP_060108.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS10394]
 gi|50903210|gb|AAT86925.1| Coproporphyrinogen oxidase, anaerobic [Streptococcus pyogenes
           MGAS10394]
          Length = 408

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 40  AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 94

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 95  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 154

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 155 NNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 214

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 215 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 274

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 275 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 329

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 330 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVKDD-AFV 388

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 389 RMTKKGLFLGDSV 401


>gi|254852100|ref|ZP_05241448.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL R2-503]
 gi|300765619|ref|ZP_07075598.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes FSL N1-017]
 gi|258605402|gb|EEW18010.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL R2-503]
 gi|300513720|gb|EFK40788.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes FSL N1-017]
          Length = 385

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 12/359 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
           N       S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    G
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKG 58

Query: 68  P-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           P   + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +
Sbjct: 59  PIAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQ 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
              VNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT  
Sbjct: 119 DHSVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEA 178

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++  L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    
Sbjct: 179 DFQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEK 238

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           HG   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    ++
Sbjct: 239 HGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YM 294

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           + ++KN     +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 295 EPLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 353


>gi|187778457|ref|ZP_02994930.1| hypothetical protein CLOSPO_02051 [Clostridium sporogenes ATCC
           15579]
 gi|187772082|gb|EDU35884.1| hypothetical protein CLOSPO_02051 [Clostridium sporogenes ATCC
           15579]
          Length = 383

 Score =  195 bits (496), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 180/338 (53%), Gaps = 12/338 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           + +Y+H PFC++KC YCDF S+ ++     E+ +  ++  + + +   T  + I +IF G
Sbjct: 13  VSLYIHIPFCMQKCLYCDFTSYGKK-----EDLMMDYIKALSKEIVDNTKNKIIKTIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + + ++ D + K      N+E T+E NP +      +  +  GVNR+S+G+
Sbjct: 68  GGTPTYLSLEALNILKDTL-KTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGL 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L   + 
Sbjct: 127 QSSKNTLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLEVVD 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HLS Y L IE+GT FY ++K+  L LP E     +Y          G   YEISN 
Sbjct: 187 LNPEHLSCYSLIIEEGTSFYNLYKNSLLKLPKEEEERKMYEYCIDFLKEKGYLQYEISNF 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HNL YW   +YIG G GAHS +    +    SI    E+++K +  N    +
Sbjct: 247 ANPNKECKHNLVYWDLEEYIGCGVGAHSYINNQRYENTNSI----ETYIKEINSNNITQI 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 303 NFHINSQKENMEEFMFMGLRKTKGICMDDFQERFGQNI 340


>gi|226951902|ref|ZP_03822366.1| coproporphyrinogen III oxidase [Acinetobacter sp. ATCC 27244]
 gi|226837442|gb|EEH69825.1| coproporphyrinogen III oxidase [Acinetobacter sp. ATCC 27244]
          Length = 344

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 188/345 (54%), Gaps = 10/345 (2%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ++ ++ + + + +   ++   RSI S+F GGGTPSLI  Q    + + +       ++ E
Sbjct: 4   EQQYLAALVADFETQIEMAQGRSIHSVFIGGGTPSLISAQGYQWLFEQLKARLGFEADCE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP +VE + F  Y   G+NR+SLGVQS + + L+ LGR H AS A+ AIH AR  
Sbjct: 64  ITLEANPGTVEHDPFADYLAVGINRLSLGVQSFDTEHLQRLGRIHTASNALDAIHQARQA 123

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F R++ DL++ LP+QT  Q   +LQ A+ +   H+S YQLTIE  T+F++       VL
Sbjct: 124 GFERVNVDLMHGLPQQTEQQALADLQLAVEHGATHISWYQLTIEPNTVFFRTQP----VL 179

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P + V   +    ++   A+G   YE+S        S HNLNYW++GDY+ IG GAH +V
Sbjct: 180 PQDEVLEHIQAEGEAYLKANGYVNYEVSAWR-KEKPSAHNLNYWQFGDYLAIGAGAHGKV 238

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       + P+ +L  V       V+ + + +++ A EF+M  LRL +G+    +
Sbjct: 239 THPEGVYRFQKTRLPKDYLAKVPAEH---VQMKRIEADELAFEFMMNALRLNDGVEATLY 295

Query: 347 EMLAGRNL-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           E   G +L ++    N  R+  +      R+ CT++G   L++V+
Sbjct: 296 EQRTGLSLAELTPILNTLREKKLLVAAADRIACTEQGHIFLNTVL 340


>gi|168181648|ref|ZP_02616312.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum Bf]
 gi|237796415|ref|YP_002863967.1| coproporphyrinogen III oxidase [Clostridium botulinum Ba4 str. 657]
 gi|182675087|gb|EDT87048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum Bf]
 gi|229261506|gb|ACQ52539.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum Ba4 str. 657]
          Length = 380

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 181/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---DNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKHTLKTIDKKENIEFTVEGNPGTFTEKKLKMLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L   +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKDTLLTVVDL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLRERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNRRYENTSSI----ETYIKEINSNNLTQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D+++  G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQVRFGKNI 337


>gi|220906936|ref|YP_002482247.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 7425]
 gi|219863547|gb|ACL43886.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7425]
          Length = 405

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/332 (34%), Positives = 171/332 (51%), Gaps = 12/332 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             Y+H PFC ++C YCDF   V     R       ++I+    E+Q       P+ ++++
Sbjct: 12  AAYIHIPFCRRRCFYCDFPISVVGDRSRGETPAINHYIEVLCQEIQLAP--VPPQPLATV 69

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL++   I  IL  +  +  ++++ EI++E +P +  +    GYR  GVNR+S
Sbjct: 70  FFGGGTPSLLDAAQIGHILQTVQDHLGIAASAEISLEVDPGTFTLAQMSGYRDRGVNRLS 129

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ + + L  +GR H  +E  AA+ + R         DLI  LP QT+ QWE  LQ 
Sbjct: 130 LGVQAFQPELLSQMGRTHTVAEIHAAVEMIRQAGLTNFGLDLISGLPGQTLEQWETSLQC 189

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+     H+S Y L +E GT+F K +  G   LP + ++  +Y L      + G   YEI
Sbjct: 190 AIDLQPTHVSTYDLVLEPGTVFGKRYSPGHTPLPEDEISAQMYELATERLRSAGYEHYEI 249

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNG 312
           SN++  G +  HN  YW+   Y G G GA S V     RV+     +    W+  +    
Sbjct: 250 SNYAQPGYQCRHNRIYWQNRPYYGFGMGATSYVN--HQRVSRPRTRREYYQWVDALAAAE 307

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
             +VE      ++   E LMMGLRL EG+S++
Sbjct: 308 GQMVEPPVTPLDEWL-ETLMMGLRLAEGVSLE 338


>gi|239631355|ref|ZP_04674386.1| coproporphyrinogen III oxidase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525820|gb|EEQ64821.1| coproporphyrinogen III oxidase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 381

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 189/383 (49%), Gaps = 16/383 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G Y+H PFC   C YCDFN   + +  GQ  ++++   L EM+ +        I +++ G
Sbjct: 3   GAYLHIPFCEHICYYCDFN---KVFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIQTVYVG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLG 136
           GGTPS + P  +A +  GI          E T EANP+ +      Q     GVNR+S+G
Sbjct: 60  GGTPSTLTPTQLATLCQGIHDILHFDQG-EFTFEANPNDLLTTEKLQVLHDYGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  +  LR +GR H A +   AI  AR + F  +S DLI+ LP Q+   +   LQ+AL
Sbjct: 119 VQSFNDDVLRRIGRIHRAKDVYTAIVNARQVGFDNISIDLIFRLPDQSRDDFLTSLQKAL 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN
Sbjct: 179 ALDLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +  HNL YWR   Y G G GA   +    +     I++    +L  +  +   V
Sbjct: 239 FAKDGYQCEHNLLYWRNDKYFGFGAGAFGYLGRDRYHNYGPIKQ----YLTPLHADHLPV 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
           +E   +   +Q +E + +GLR  +G+S   +       +D    E    L  QG + R Q
Sbjct: 295 LEHHLVPQSEQIEEEMFLGLRTMQGVSEARFYDRYHMTVDAIYGETVPELVSQGLVVR-Q 353

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +R T +G  + + V     +
Sbjct: 354 DGYIRLTNKGKFLGNEVFQRFLI 376


>gi|94994313|ref|YP_602411.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS10750]
 gi|94547821|gb|ABF37867.1| Coproporphyrinogen oxidase (NAD) [Streptococcus pyogenes MGAS10750]
          Length = 376

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 201/372 (54%), Gaps = 15/372 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLRALIQEFDSY----GIRDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+  
Sbjct: 64  TAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLR 377
           L  E+  +E L +GLR + G+S++ ++   G   +       R LQ QG + +   + +R
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMPFEERYGNIVRELQNQGLLVKDD-AFVR 357

Query: 378 CTQRGMTMLDSV 389
            T++G+ + DSV
Sbjct: 358 MTKKGLFLGDSV 369


>gi|153941159|ref|YP_001392239.1| coproporphyrinogen III oxidase [Clostridium botulinum F str.
           Langeland]
 gi|152937055|gb|ABS42553.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum F str. Langeland]
 gi|295320237|gb|ADG00615.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum F str. 230613]
          Length = 380

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 181/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNSLKTIDKKENIEFTVEGNPGTFTGKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L + +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLKVVDL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNNLTQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|313140105|ref|ZP_07802298.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132615|gb|EFR50232.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 420

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 188/411 (45%), Gaps = 47/411 (11%)

Query: 26  PFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSISSIFF 76
           PFC+++C YCDFN++          + N+    + EM+ +R       +  P  +S++FF
Sbjct: 2   PFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEP-PVSTVFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + GV R+S G
Sbjct: 61  GGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGVTRVSFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   ++ A+ 
Sbjct: 121 MQSAVPHVLKTLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVRTAVD 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  YEISN 
Sbjct: 181 LGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYEISNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--------------GSHRVAISIEK--- 299
           S  G ES HNL YWR  D+ G+GPGAHS   +               +  V+ S+     
Sbjct: 241 SRPGYESRHNLGYWRNVDWAGLGPGAHSHYNMVMGSSTDGDAANSDAAGDVSASVTSTSM 300

Query: 300 ------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV---------- 343
                 HP  W   +          E +S  +  +E +M+GLR+REG+ +          
Sbjct: 301 RGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRHIEAV 360

Query: 344 ---KDWEMLAGRNLDIECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVI 390
              +D      R +D  C   L   G I           T+RG  + D+VI
Sbjct: 361 NRAQDAAQGTLRIIDDACLTPLVGDGLITLDPTTGHAVATRRGRLLNDAVI 411


>gi|300933257|ref|ZP_07148513.1| coproporphyrinogen III oxidase [Corynebacterium resistens DSM
           45100]
          Length = 433

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 201/430 (46%), Gaps = 58/430 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRY----------KVGQENFIQSFLT----EMQWMRQL 65
           G+Y+H PFC  +C YCDFN++  +              + N I  +L     E++    L
Sbjct: 5   GLYIHVPFCATRCGYCDFNTYTPQELADDSASTLNSAARGNTIDGYLDALERELELAVSL 64

Query: 66  TGPRS-------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             PRS       + ++FFGGGTPS++  + +   L  I + + +++  E+T E+NP S  
Sbjct: 65  WEPRSKEEGGSAVDTVFFGGGTPSMLGAEGLTRALRAIKRTFGLTAGAEVTTESNPESTN 124

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
              F   R+ G  RISLG+QS     L+ L R H    ++AA   A    F  ++ DLIY
Sbjct: 125 PEFFAALREEGFTRISLGMQSAAGHVLKVLERQHTPGRSVAAAREALAAGFDHVNLDLIY 184

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T       L+  +S  VDH+S Y L +E GT   +  + G+L  P E+V  D Y 
Sbjct: 185 GTPTETDADLLKSLEAVVSAGVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVLADRYR 244

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
           +     +  G   YE+SN +  G E  HNL YWR G + G GPGAH  V++ +    ++ 
Sbjct: 245 MIDQFLTDAGFEWYEVSNWAKPGGECRHNLVYWRSGQWWGAGPGAHGCVRLRTSAELVAA 304

Query: 298 E-------------------------KHPES-WLKMVRKNG------HAVVEKEFLSSEQ 325
           +                         K P + W  ++ + G       +VV  E LS   
Sbjct: 305 DSRVMGTQVSGGAGGEFSGLTRLVNAKRPATYWQGLMGRGGVKPEIPASVVTLEQLSRAD 364

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
            A E +M+GLRLREG+ +      A   LD E  +  QR G +  V+ ++L  T  G  +
Sbjct: 365 VATERVMLGLRLREGLDLGVLRQTA--ELD-EVLKRYQRLG-LANVEGTKLMLTDEGRYL 420

Query: 386 LDSVIANLAV 395
            D ++ ++ +
Sbjct: 421 ADGIVTDIVL 430


>gi|28896092|ref|NP_802442.1| coproporphyrinogen III oxidase [Streptococcus pyogenes SSI-1]
 gi|28811342|dbj|BAC64275.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes
           SSI-1]
          Length = 398

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 30  AYVHVPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 84

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 85  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 144

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 145 NNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 204

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 205 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 264

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 265 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 319

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 320 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVKDD-AFV 378

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 379 RMTKKGLFLGDSV 391


>gi|21910209|ref|NP_664477.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS315]
 gi|21904403|gb|AAM79280.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes
           MGAS315]
          Length = 408

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E        G R + +++ GGGT
Sbjct: 40  AYVHVPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFDSY----GIRDLKTLYIGGGT 94

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 95  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 154

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 155 NNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 214

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 215 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 274

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 275 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 329

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 330 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVKDD-AFV 388

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 389 RMTKKGLFLGDSV 401


>gi|325845625|ref|ZP_08168909.1| coproporphyrinogen dehydrogenase [Turicibacter sp. HGF1]
 gi|325488323|gb|EGC90748.1| coproporphyrinogen dehydrogenase [Turicibacter sp. HGF1]
          Length = 378

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 204/376 (54%), Gaps = 15/376 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN--FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G+Y+H PFC   C YCDF   + +   GQ +  +I++ + E++  +Q  G  ++ SI+ G
Sbjct: 4   GLYIHIPFCDHICTYCDFPKLLTK---GQRHAEYIEALIQELKLYQQNVGFSNLQSIYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + I  + D + +   ++   E +IEANP ++  +  Q  +  GVNR SLGV
Sbjct: 61  GGTPTALSVEQIQPVFDFLTEQIQMNQIQEFSIEANPENLTRDKIQYLKAQGVNRFSLGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E  L+ +GR H A E I A+ +L +     ++ DLIYA+P QT+ +   +L++ +S
Sbjct: 121 QTFHESLLKRIGRKHQAQEVIQAVANLKQCGIKNINLDLIYAIPGQTLDELRDDLRQVIS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y L +E+ T  Y  +    + L    +   +Y +T    +  G   YEISN 
Sbjct: 181 LEVEHISAYSLIVEEHTQLYLAYMRDQIELTDNEIEAKMYEVTIETLTEAGYEHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     SLHN  YW+   YIG+G GAH  VK   ++   SI     +++++++     ++
Sbjct: 241 A-KSKPSLHNQWYWKNETYIGVGLGAHGYVKGQRYQNTRSI----NTYIELLKDGKLPMI 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
           E   L+ E+  +E + +GLRL +G+++K        N+D    +    L ++G++E+ + 
Sbjct: 296 ESHALTKEEMIEEEMFLGLRLLKGVNLKAISDKYDVNIDEIYGKAFEELIQKGYLEQKEL 355

Query: 374 SRLRCTQRGMTMLDSV 389
           + +R T  G+ M + V
Sbjct: 356 N-VRLTPSGLLMANEV 370


>gi|332520040|ref|ZP_08396504.1| oxygen-independent coproporphyrinogen III oxidase [Lacinutrix
           algicola 5H-3-7-4]
 gi|332044599|gb|EGI80793.1| oxygen-independent coproporphyrinogen III oxidase [Lacinutrix
           algicola 5H-3-7-4]
          Length = 375

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 198/378 (52%), Gaps = 13/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       ++  I + + E++  +      ++ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMKKKDELINALIKELEIRKTEFNNITVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  I+D +  N+ V  N EIT+EANP  +          + +NR+S+G+QS
Sbjct: 61  TPSLLSTLEINNIIDAVYSNYKVIHNPEITLEANPDDLNNQQIIKLSHSPINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HN+SEA + +  A   F  +S DLIY +P  T  +WE  +  ALS+ +
Sbjct: 121 FHEKDLKLMNRAHNSSEAKSCLVEATKYFNNISLDLIYGIPGTTNAEWEENIAIALSFGI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y LT+E  T      K G +    + +A + +++     + +    YE+SN    
Sbjct: 181 NHISSYALTVEPKTALASFIKKGIIDNVDDALAQEQFHILIEKLAQNNFIHYELSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW+   YIGIGP AHS       +   ++  + + ++K +  N    +E E
Sbjct: 241 GFFSKNNSAYWQGKPYIGIGPSAHS---FNGKQRGWNVRNNTK-YIKSIENNT-LPIEIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSR 375
            L+   Q +E++M GLR   G+S++  +   G +  I   +  Q Q FI+     ++ ++
Sbjct: 296 TLTITDQYNEYVMTGLRTVWGVSIQKIDSDFGEHFKIYLLK--QAQKFIKEQLLYIENNK 353

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T++G  + D + ++L
Sbjct: 354 LLVTKKGKFLSDGIASDL 371


>gi|111018259|ref|YP_701231.1| coproporphyrinogen III oxidase [Rhodococcus jostii RHA1]
 gi|110817789|gb|ABG93073.1| probable O2-independent coproporphyrinogen III oxidase [Rhodococcus
           jostii RHA1]
          Length = 420

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 190/393 (48%), Gaps = 27/393 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------ENFIQSFLTEMQWMR 63
           + G GS   G+YVH PFC  +C YCDFN+    Y  G+       +++++    E+    
Sbjct: 37  LKGVGSRPFGIYVHVPFCATRCGYCDFNT----YTAGELGTSASPQSWMEGLRRELDLAA 92

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++TG  ++ ++F GGGTPSL+    ++ +L  +  ++ ++   E+T E+NP S     F+
Sbjct: 93  EMTGAPAVDTVFVGGGTPSLLGGDGLSDVLGAVRSSFGIAKGAEVTTESNPESTSPEFFE 152

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G  RISLG+QS  +  LR L R H    A+AA   AR   F  ++ DLIY  P +
Sbjct: 153 RLRAGGFTRISLGMQSAAQHVLRVLDRTHTPGRAVAAAQEARAAGFEHVNLDLIYGTPGE 212

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                ++ L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    + 
Sbjct: 213 RDEDLDLSLDAVLSAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDAR 272

Query: 243 TSAHGLHAYEISNHSFLGAES-----LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            +  GL  YE+SN +   A +      HNL YW  GD+ G GPGAHS V      V    
Sbjct: 273 LADAGLTWYEVSNWASADAATGESRCRHNLGYWDDGDWWGAGPGAHSHVG----GVRWWN 328

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KHP  +   +      V   E L++E    E +M+  RLR G+ V + +       +  
Sbjct: 329 VKHPARYADQLAAGSLPVGGSEQLTAEDVHVERVMLTARLRTGLPVAELDA-----AEQH 383

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +   G + R Q   L  T RG  + D+V+
Sbjct: 384 AAETVVADGLLVR-QGQHLVLTDRGRLLADAVV 415


>gi|229495212|ref|ZP_04388947.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas endodontalis ATCC 35406]
 gi|229317655|gb|EEN83553.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas endodontalis ATCC 35406]
          Length = 399

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 202/404 (50%), Gaps = 40/404 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
           G+Y+H PFC  +C YC F S     +  QE F+ +   E++  R+   P  SI +++FGG
Sbjct: 3   GLYLHVPFCKSRCAYCAFYSQTNTRQ--QEAFVAALCRELELRREELAPSISIETVYFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  I+D I + ++   + E T+E NP  +        R    NR+SLGVQ
Sbjct: 61  GTPSLLSPSQLEKIVDTIRRVYSPEPDAEWTLEGNPDDLTPEYAHALRLLRFNRVSLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ LRFLGR H A +  +AI   R   F  +S DLIY+LP Q+   W+  L  AL  
Sbjct: 121 SFCDEELRFLGRRHTARQVYSAIEALRTADFSNISIDLIYSLPGQSHQLWQQNLSSALVL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSAHGLHAYEISNH 256
            + H+S Y LT E+ T    + + G +   S+  A+ D Y L  ++    G   YE+SN 
Sbjct: 181 EIPHISAYNLTYEEHTRLTHLARRGSIEKQSDEDALRDYYYLVDTL-HGRGYDHYELSNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +F G  S HN +YW    Y+G GP AHS +    +        H   +++ +++   A+ 
Sbjct: 240 AFRGMHSRHNSSYWDRVPYLGFGPSAHSYLPESRYANV----AHLHRYIEYLQQGTTAID 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFI---- 368
            +E LS     +E +M GLR  +G+ +++   + GR     L    E  L  QG +    
Sbjct: 296 FREDLSPTDCFNEIIMTGLRRAKGVDLQNVSEVFGRKKLSFLQTASEPYLA-QGLLILDS 354

Query: 369 ---------------ERV----QFSRLRCTQRGMTMLDSVIANL 393
                          ERV    QF  LR ++ GM ++DS+I++L
Sbjct: 355 SSQYSIEAPSPSICKERVANEGQF--LRASREGMVVIDSIISDL 396


>gi|301346551|ref|ZP_07227292.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB056]
          Length = 351

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 191/345 (55%), Gaps = 10/345 (2%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ++ ++++ + + +   +L   RSI S+F GGGTPSLI  +  A + + +        + E
Sbjct: 11  EQTYLKALVADFETQVELAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCE 70

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP ++E + F GY +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR  
Sbjct: 71  ITLEANPGTLEHDPFAGYLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQA 130

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F R++ DL++ LP+QT+ Q   +L+ A+     H+S YQLTIE  T+F++       VL
Sbjct: 131 GFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGATHISWYQLTIEPNTVFFRTQP----VL 186

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P + V  D+    ++   A+G   YE+S        S HNLNYW++GDY+ IG GAH +V
Sbjct: 187 PQDEVLEDIQEQGEAYLKANGFINYEVSAWR-KEQPSAHNLNYWQFGDYLAIGAGAHGKV 245

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       + P+ +L  V    H  ++K  + +++   EF+M  LRL +G+  + +
Sbjct: 246 TRPDGVYRFQKTRLPKDYLAKVPAE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELY 302

Query: 347 EMLAGRNL-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           E+  G +L D+       R   +      RL CT++G   L+SV+
Sbjct: 303 ELRTGLSLNDLNDVLTSLRSRKLLVEDSGRLACTEQGHIFLNSVL 347


>gi|291458007|ref|ZP_06597397.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419339|gb|EFE93058.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 408

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 204/391 (52%), Gaps = 24/391 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC +KC YCDF S     +     +I     E+    +      ISS+F GG
Sbjct: 24  LELYLHIPFCARKCSYCDFLSFSVNAR-EHAPYIGKLCQELSLFSKAASDYEISSVFIGG 82

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++P  I  +L  I +++ +  + EITIE NP+S     F  Y ++G+NR+S+G+Q
Sbjct: 83  GTPSVLDPHFIEALLQTIREHYHLRDDAEITIEVNPASTLRYKFASYLRSGINRLSIGLQ 142

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   + +     AR   F  +S DL+  +P QT   W   L+  +  
Sbjct: 143 SANNEELHRLGRIHIFEDFLKCYQGARLEGFQNISIDLMKNIPGQTPASWRKSLKNVIML 202

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY L +E+GT FY++ + G+L LP E++  ++  + + +T  HG   YEISN++
Sbjct: 203 KPEHLSLYDLIVEEGTPFYELDRKGELELPDEDMEEEIDEIAKELTEKHGYSRYEISNYA 262

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS--------RVKVGSHRVAISIEKHPESWLKMVR 309
             G    HN  YW    Y+G G GA S         ++  S  + + + K  E+    +R
Sbjct: 263 RPGYFCRHNYGYWSNIPYLGFGLGASSCFEGSRWHNLRDLSDYLTLDLRKDAEAGCPKLR 322

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECERNLQR 364
           +      E + LS   + +EFL +GLR   G+S  D+  ++  ++D+        +   R
Sbjct: 323 E------EYKKLSRRDEINEFLFLGLRRTAGVSEIDF--VSRFSVDLFSIFGPSLKRFLR 374

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG + + + +RL  T+RGM + + +++ L +
Sbjct: 375 QGLLVK-ENARLYFTERGMMISNMLLSQLLL 404


>gi|256545387|ref|ZP_05472750.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398948|gb|EEU12562.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           vaginalis ATCC 51170]
          Length = 374

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 200/378 (52%), Gaps = 25/378 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSI 74
            +G+Y+H PFC KKC YCDF +         E++I S+   ++    + Q      + SI
Sbjct: 3   KIGIYIHIPFCKKKCFYCDFTAFQ-----NLESWIASYFENLKKEIILYQKNMNVEVDSI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ ++   I  +++ I KN+ +S+  E TIEANP+S+ +   + Y+  G+NRIS
Sbjct: 58  YIGGGTPTYVDYHYIDELVE-ILKNFDLSNVKEFTIEANPNSLTLEKLKAYKNLGINRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS +++ L+ +GR+HN    +  I   R   F  +S D+I  LP       + +L+ 
Sbjct: 117 LGVQSFDDKVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEI 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +HLS Y L +EKG+ FY ++K   L L  +++  D+++  +      GL  YEI
Sbjct: 177 IKKINPEHLSYYSLILEKGSHFYSLYKKDKLKLMDDDLERDIFSYIEKYLKNLGLDRYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAH---SRVKVGSHRVAISIEKHPESWLKMVRK 310
           SN S  G ES HN  YW  G Y+  G GA    S V+  + +  +  E       K++ +
Sbjct: 237 SNFSKKGFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVKYE-------KLINE 289

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGF 367
               +  +EF+S +++  E+++  LR   GI++K++E + G++L     E      + GF
Sbjct: 290 GKFPIEFREFISKDEREKEYIIFKLRETSGINLKEFENIFGQSLLEKYSEPVEKFLKLGF 349

Query: 368 IERVQFSRLRCTQRGMTM 385
             ++   R+R T +G  +
Sbjct: 350 F-KID-DRIRFTHKGFDL 365


>gi|85859404|ref|YP_461606.1| coproporphyrinogen III oxidase [Syntrophus aciditrophicus SB]
 gi|85722495|gb|ABC77438.1| coproporphyrinogen III oxidase [Syntrophus aciditrophicus SB]
          Length = 404

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 202/381 (53%), Gaps = 14/381 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +  ++ G+Y+H PFC  KC YCDF S     ++   +F+ +   EM    ++   +   +
Sbjct: 30  RAEDNPGLYLHIPFCEIKCRYCDFFSVTELSRI--TDFLDAICREMNLRGKVF--KFFDT 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTPS++ P  +  +L+ + +++ +S   EIT+EANP+ + V+  +  R  G+NR+
Sbjct: 86  LYIGGGTPSVLRPDQLNRLLEHLHQHFKISKEAEITLEANPADISVSVMKELRSLGINRL 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           ++GVQS +   L FLGR HN  +AI AI  +    F     DLIY +P Q    W   L+
Sbjct: 146 NIGVQSFDNHILEFLGRRHNGRQAIRAIEASLQAGFGNFGIDLIYGIPGQKRNTWIKTLE 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL++ + HLS YQLT+E  T   + +K G ++ P  +   +L+  T       G   YE
Sbjct: 206 QALTFQIPHLSCYQLTVEPETPLGQSYKKGLILTPDNDELFELFMDTSEFLEKAGYCHYE 265

Query: 253 ISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           +SN +   +  S HN  YW +  Y+G+GP AHS       +  +++ +  E +++ + + 
Sbjct: 266 VSNFARGDSRISRHNSKYWHHIPYLGLGPSAHS---FDGEKRWMNV-RSLEDYIQRLNQG 321

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFI 368
              +   E L+ E+   E L +G R   GI + D+E   G NL    ER+   L   G +
Sbjct: 322 KLPMEFCENLTREELQFEALFLGFRTSAGIDLDDFEEKFGWNLWSVKERDYELLLDAGHL 381

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
           + V   RL+ T+ GM + DS+
Sbjct: 382 KIVN-GRLQPTRTGMALADSL 401


>gi|226224077|ref|YP_002758184.1| coproporphyrinogen III oxidase [Listeria monocytogenes Clip81459]
 gi|225876539|emb|CAS05248.1| Putative coproporphyrinogen III oxidase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 385

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 12/359 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
           N       S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    G
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKG 58

Query: 68  P-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           P   + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +
Sbjct: 59  PIAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQ 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
              VNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT  
Sbjct: 119 DHRVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEA 178

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++  L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    
Sbjct: 179 DFQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEK 238

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           HG   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    ++
Sbjct: 239 HGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YM 294

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           + ++KN     +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 295 EPLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 353


>gi|313884880|ref|ZP_07818632.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619571|gb|EFR31008.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 376

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 177/331 (53%), Gaps = 12/331 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           + ++G+YVH PFC K C YCDF +        Q++ I  ++  +    QL   R   + +
Sbjct: 2   AETIGLYVHIPFCQKLCHYCDFLTFE-----DQDDVIPQYVDYLIKEMQLYQDRDYILDT 56

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTPS +E   +A I+DGI   + V+ + E++IE NP SV     + Y+  G NR 
Sbjct: 57  IYFGGGTPSHLEADLMAKIMDGIYATFKVTDDCEVSIEMNPESVTEEKIKTYQAKGFNRF 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS + + L+ +GR H+   AI   HL R++    +S DL++  P+Q M     ++ 
Sbjct: 117 SMGVQSFDPKVLQIMGRLHSRQTAIDKFHLLRDLGCDNVSIDLMFNNPRQDMDILNRDID 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+    +H+S Y L I+  T F +  K G + L  E    D+Y+  Q   S  G + YE
Sbjct: 177 QAIELNPNHISYYSLMIKDNTNFQRWLKAGRIKLFDEKTDRDMYHNIQDRLSQAGFNQYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS+ +  G ES HN  YW+  +Y+G+G GA S + +       +  +  + +   + +  
Sbjct: 237 ISSFARDGKESRHNKKYWQLENYLGVGMGASSNIDLRR----FTNTRRFKDYFAAIDQGQ 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
             V   E +  E++  EF+M+ +RLR+G  +
Sbjct: 293 MPVESSEMMDLEEREKEFIMLNMRLRKGFDI 323


>gi|293374233|ref|ZP_06620561.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Turicibacter sanguinis PC909]
 gi|292647066|gb|EFF65048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Turicibacter sanguinis PC909]
          Length = 378

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 204/376 (54%), Gaps = 15/376 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN--FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G+Y+H PFC   C YCDF   + +   GQ +  +I++ + E++  +Q  G  ++ SI+ G
Sbjct: 4   GLYIHIPFCDHICTYCDFPKLLTK---GQRHAEYIEALIQELKLYQQNVGFSNLQSIYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + I  + D + +   ++   E +IEANP ++  +  Q  +  GVNR SLGV
Sbjct: 61  GGTPTALSVEQIQPLFDFLTEQIQMNQIQEFSIEANPENLTRDKIQYLKAQGVNRFSLGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E  L+ +GR H A E I A+ +L +     ++ DLIYA+P QT+ +   +L++ +S
Sbjct: 121 QTFHESLLKRIGRKHQAQEVIQAVANLKQCGIKNINLDLIYAIPGQTLDELRDDLRQVIS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y L +E+ T  Y  +    + L    +   +Y +T    +  G   YEISN 
Sbjct: 181 LEVEHISAYSLIVEEHTQLYLAYMRDQIELTDNEIEAKMYEVTIETLTEAGYEHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     SLHN  YW+   YIG+G GAH  VK   ++   SI     +++++++     ++
Sbjct: 241 A-KSKPSLHNQWYWKNETYIGVGLGAHGYVKGQRYQNTRSI----NTYIELLKDGKLPMI 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
           E   L+ E+  +E + +GLRL +G+++K        N+D    +    L ++G++E+ + 
Sbjct: 296 ESHALTKEEMIEEEMFLGLRLLKGVNLKAISDKYDVNIDEIYGKAFEELIQKGYLEQKEL 355

Query: 374 SRLRCTQRGMTMLDSV 389
           + +R T  G+ M + V
Sbjct: 356 N-VRLTPSGLLMANEV 370


>gi|218295222|ref|ZP_03496058.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           aquaticus Y51MC23]
 gi|218244425|gb|EED10950.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           aquaticus Y51MC23]
          Length = 368

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 196/382 (51%), Gaps = 23/382 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            N   +YVH PFC   CPYCDF+  VRR  V  E +++    E + +  L  P  +S+++
Sbjct: 2   PNPASLYVHVPFCPTLCPYCDFHV-VRRGGVWVEAYLKRLGEEAKAL-HLAYPEPLSTLY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS +  + +  +   +   W +    E+T+EANP ++  +     +  GVNR+SL
Sbjct: 60  LGGGTPSYLRDRELVALFQSLP--WRLQEGAEVTLEANPGTLSPSRLALLKDLGVNRLSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ LRFLGR H    A+ A+ +A     R+S DLI  LP Q +   E +L+ A 
Sbjct: 118 GVQSFQDEVLRFLGRAHGRKGALKAVEMALEAGFRVSIDLILGLPMQDV---EKDLKEAA 174

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V H+S Y L +EKGT F  +    D     E  A  +    + +  A GL  YE+SN
Sbjct: 175 RLGVGHVSAYTLQVEKGTPFALLGLRED----PEREAWAMERAEEVLGEA-GLLRYEVSN 229

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHA 314
            +  G E+ HNL YWR G ++ +GP A  +        A      P   WL      G A
Sbjct: 230 FAREGEEARHNLVYWRAGFWLALGPAATGQYPGEGPAYAFRRTGPPLPRWL-----TGEA 284

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERV 371
             E E ++  + A E LM+GLRL+EG+ V + E   G +L          L ++G +  +
Sbjct: 285 PRE-EAITPLEHAKEALMLGLRLKEGVDVGELEGRTGLSLWPALEARAEALAQEGLL-LL 342

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              RLR T +G+ +L++V+ +L
Sbjct: 343 SGKRLRPTGKGLALLNAVVLSL 364


>gi|110598130|ref|ZP_01386408.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium ferrooxidans DSM 13031]
 gi|110340262|gb|EAT58759.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium ferrooxidans DSM 13031]
          Length = 377

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 190/384 (49%), Gaps = 23/384 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISSI 74
           L +YVH PFC  +C YCDF      Y V     +++F   +        P    R+IS+I
Sbjct: 2   LSLYVHIPFCRSRCSYCDF------YLVTATKHVEAFFRALALETAFRAPMLQGRTISAI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTPS++    +A  L+ +A   T S ++EI +EANP  +     +G R AG+ R+S
Sbjct: 56  HFGGGTPSMVPVHYLAGWLEQVAALCTFSPDIEIALEANPEDLAAGAMEGIRAAGITRLS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  ++ LR LGR H A E++     A   F  +S DLI  +P + M  W+ ++++A
Sbjct: 116 IGLQSFTDEKLRALGRAHTALESMQVTERALKHFDSVSVDLICGVPGEKMPLWKADMEQA 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +     H+S+Y L++E  TL ++   +G + +  E+V  DLY          G H YE+S
Sbjct: 176 VMLRPQHISVYMLSVEPKTLLHRNLMNGSITVLDESVQADLYEYAGRKLGEEGYHHYEVS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N       S +NL  W+   YIG GP AHS    G       I     S L     N  A
Sbjct: 236 NFCLGNHHSRYNLASWKRQPYIGFGPSAHSFYCSGGR----EIRTANVSALSRYIANPEA 291

Query: 315 VVE-KEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIE 369
           V   +E L+ E+   E + + LR+  G+ V    KD ++  G  L     R  + +G+I 
Sbjct: 292 VGSFREELTDEEIFTEKVFLALRINSGLCVEFLRKDNKL--GLRLSERIAR-FEAKGWI- 347

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           R+   RL  T++G    D +  +L
Sbjct: 348 RLAEERLYLTEKGFLFADLIAGDL 371


>gi|114567101|ref|YP_754255.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114338036|gb|ABI68884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 381

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 203/382 (53%), Gaps = 18/382 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G+Y+H PFC+KKC YCDF S   +     +++  +   E++ +  L     I SI+ GG
Sbjct: 6   VGLYIHIPFCLKKCGYCDFYSLPLQSPAQLQSYTDAIRLEIEKLATLFSDSIILSIYLGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  I++ +A N+ VSSN EI++E NP++      +G   AGVNRISLG+Q
Sbjct: 66  GTPSLLGLEQLQSIVEAVAYNFNVSSNAEISLEMNPATRREGFLRGILAAGVNRISLGIQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + LR LGR H   E + +I  L +      + DLIY +P Q++  W+  L+ A+S 
Sbjct: 126 SFSPEELRVLGRVHGYYEIMQSIEALHKEGCQNFNLDLIYGIPGQSLESWQRSLELAVSC 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L +++ T   +  +   + L  E     +Y++        G   YE+SN  
Sbjct: 186 GPQHISAYLLQLDESTAMARAIESAQIELLDEESENAMYHMALDYLPEKGFRHYELSNFC 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNLNYW   DYIGIG GA S +    +R    +++    +L  +     A VE
Sbjct: 246 QAGFECRHNLNYWCGRDYIGIGAGAVSCIGRQRYRNRPFLKE----YLMSLEVGQEAPVE 301

Query: 318 -KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLD------IECERNLQRQGFIE 369
             E +S+E++  E +++ LRL +GI   D    A R  LD      +E E + +++G + 
Sbjct: 302 ILEQMSAEEKMREEIILALRLCDGI---DLAQFAARYQLDFRERFAVEIE-DAEQKGLL- 356

Query: 370 RVQFSRLRCTQRGMTMLDSVIA 391
           +++ +RL  T+RG  + + V  
Sbjct: 357 KLENNRLCLTRRGYFLSNQVFC 378


>gi|291514372|emb|CBK63582.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alistipes shahii WAL 8301]
          Length = 377

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 13/334 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC + C YCDF   V   ++  +  ++S   E+   R+  G   + + +FGGG
Sbjct: 3   GLYFHIPFCKRVCAYCDFYKSVDLRRM--DPLLESMHRELDARREYLGSEPVRTRYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P+ +  +LD  A  +  ++  E T+EANP  +        R+AGVNR+S+G+QS
Sbjct: 61  TPSLCAPEAVTGLLDHAATLFDCTAAEETTLEANPDDLTPAYLAALRRAGVNRLSVGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ + R HNA++A+ A+  A R  +  ++ DLI+ +P          L  AL+  
Sbjct: 121 FDDACLKLMNRRHNAAQAVEAVRSAQREGYENITVDLIFGVPGFGDDTLRRSLDSALALG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+E GT F +    G      E  +   Y L     +  G   YE+SN + 
Sbjct: 181 VQHISAYHLTVEPGTAFGRRAARGQFAPVDEATSETEYALVHETLTGAGFEHYEVSNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HN  YW    Y+GIGP AHS      H    S+ ++           G    E 
Sbjct: 241 PGFRARHNAAYWHGVKYLGIGPAAHSFDGRERHWNVASVTEY----------IGGTPAEA 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
           E L+   + +E++M  LR  EGI +++ E L G+
Sbjct: 291 ETLTDRDRFNEYVMTRLRTAEGIDLREAERLFGK 324


>gi|15613906|ref|NP_242209.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
 gi|10173959|dbj|BAB05062.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
          Length = 385

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 189/381 (49%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   E ++Q+  TEM  +      +S+ +++ GGG
Sbjct: 4   AAYIHIPFCEHICYYCDFNKFYLKNQPVNE-YLQALETEMAMVVAEQPTKSLQTLYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +A +L  I +   +S   E T E NP S++       R  GV+R+S+GVQ+
Sbjct: 63  TPTALTADQLAQLLASIKRTLPLSDLEEFTFEVNPDSIDEEKLDVLRSYGVDRLSIGVQA 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ +GR H+      A+  +R   F  +S DL+  LPKQT   +   L+ A +  
Sbjct: 123 FQPLLLKEIGRTHDQKSVEQAVEKSRQAGFANLSLDLMLGLPKQTPEMFAETLKEAFALE 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+HLS Y L +E  T+FY   + G L LP E+  V +Y      T  HG   YEISN + 
Sbjct: 183 VEHLSCYSLKVEAKTVFYNRQRQGRLTLPPEDDEVKMYRQLCYETEKHGFKQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GAH  V    +     + K    +L+ + +    V E 
Sbjct: 243 KGYESRHNLVYWNNDEYYGFGAGAHGYVGGVRYMNHGPLPK----YLQAMEEGRRPVFES 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
             +S  +Q +E + +GLR R G+  + +    G ++    E+ + +   +  +ER    R
Sbjct: 299 HHVSRVEQMEEQMFLGLRKRSGVEERVFVERFGVSMFSLYEKQIAQLVARCLLERTD-DR 357

Query: 376 LRCTQRGMTMLDSVIAN-LAV 395
           +R T  G+ + + V    LAV
Sbjct: 358 VRLTDEGLLLGNEVFEQFLAV 378


>gi|222100383|ref|YP_002534951.1| Oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           neapolitana DSM 4359]
 gi|221572773|gb|ACM23585.1| Oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           neapolitana DSM 4359]
          Length = 374

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 167/337 (49%), Gaps = 17/337 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSI 74
            L VYVH PFC KKC YCDF      Y V  E+F   +     E++  R +     I ++
Sbjct: 2   KLAVYVHIPFCKKKCVYCDF------YSVASEDFEEYLSLVFEEIELYRDVLKESEIETV 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+ P  +  IL+ + +     S +E TIE NP SV+    + YRK G+NRIS
Sbjct: 56  YFGGGTPSLVPPSFLEKILEKLKEVSKKFSPLETTIEVNPESVDREKLRSYRKMGINRIS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS ++  L+  GR ++         L    F  ++FD I  LP +T    E  L   
Sbjct: 116 LGVQSCDDGVLKKCGRLYDEKMLKEKAELVLAEFDNVNFDFILGLPGETDETLEKNLHFL 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   H+SLY L +++ T  Y + K   L LP  +     +++      + G   YEIS
Sbjct: 176 EEFTPQHVSLYFLEVDENTPLYSLLKKNLLTLPDSDEVERRHDVFVEFLKSRGFERYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKNG 312
           N +    ES HNL YWR  DY+G GP A      G H  R   +       + KMV++  
Sbjct: 236 NFARPERESRHNLFYWRNHDYLGFGPSA------GGHLGRFRYTNVSDLSMYAKMVKEKT 289

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                +   + E++A E L MGLR +EG+ +K  E L
Sbjct: 290 FPYDYQHKNTEEEEALEILFMGLRTKEGVELKRVERL 326


>gi|319790666|ref|YP_004152299.1| oxygen-independent coproporphyrinogen III oxidase [Thermovibrio
           ammonificans HB-1]
 gi|317115168|gb|ADU97658.1| oxygen-independent coproporphyrinogen III oxidase [Thermovibrio
           ammonificans HB-1]
          Length = 376

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 191/383 (49%), Gaps = 31/383 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KC YCDF S   R K G    + + L+ +Q   Q        +++FGGG
Sbjct: 7   ALYVHVPFCRSKCFYCDFYSEAGRTKDGYVKLLLTELSLLQPELQ-----QFPTVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+EP     +L        V    E+T+E NP        +  R+ GVNR+S+GVQS
Sbjct: 62  TPSLMEPSFFETLLS------RVGQFSEVTVEFNPEDATPQKLRALRELGVNRVSIGVQS 115

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L + +L+ L R H A + + A+  A  +F  +S DLIY +P Q   ++  EL+  LS  V
Sbjct: 116 LSDTTLKALRRRHTARQGLKAVEEALKVFNNVSVDLIYGVPGQRPEEFLRELETLLSLPV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY LT    T   ++ + G + LP E    + Y L   +    GL  YEISN +  
Sbjct: 176 KHVSLYALTPYSETQLGRLVELGKVELPPEEQVEECYRLGAKLLEEKGLKRYEISNFALE 235

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G    HNL+YWR  +Y+GIGP A S       R   S+    ES+ + +        E+ 
Sbjct: 236 GFRCKHNLHYWRLNNYLGIGPSAASFSDSRYRRNVSSL----ESYERKLAAGELPTAEEV 291

Query: 320 FLSSEQQADEFLMMGLRLREGIS-----VKDW--EMLAGRNLDIECERNLQRQGFIERVQ 372
             S ++  +  L  GLRL EG+      +K+W  E+LA      E    +  +G +E   
Sbjct: 292 KFSPDELKEVKLSFGLRLTEGVELEALGLKEWFQELLAAD----EAIGAMVEEGLLE--- 344

Query: 373 FS--RLRCTQRGMTMLDSVIANL 393
           FS  RLR  ++G+   ++VIA L
Sbjct: 345 FSGGRLRLGEKGVLTSNAVIATL 367


>gi|320533979|ref|ZP_08034539.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133809|gb|EFW26197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 428

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 172/340 (50%), Gaps = 14/340 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGP 68
           G       VY+H P+C  +C YCDFN++     +GQ    E+F+ +   E++  R+    
Sbjct: 27  GGAERPFSVYLHVPYCQVRCGYCDFNTYTN-LTMGQGASAEDFVGTLAGELRAARRAMDG 85

Query: 69  -----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                RS  ++F GGGTP+++   ++  +L+ + + + +++N E+T EANP SV+     
Sbjct: 86  VGLPVRSARTVFVGGGTPTMLPASDLVSMLELVRECFGLAANAEVTTEANPDSVDEAGLA 145

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              + G +R+S G+QS     L+ L R H  +     +  AR      S DLIY  P ++
Sbjct: 146 ALAEGGFSRVSFGMQSAVPHVLKVLERTHEPARVPRVVEWARRTGLSTSLDLIYGAPGES 205

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W+  L      + DH+S Y L IE+GT  +   + G+L +P ++     Y +  ++ 
Sbjct: 206 LEDWQRSLDAVTRISPDHVSAYALVIEEGTRMWGQVRRGELPMPEDDDEATKYEMADAVL 265

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN +  GAE  HN  YW   D+ G GPGAHS +      V +   KHP +
Sbjct: 266 RQAGYEWYEISNWARPGAECRHNQAYWLDWDWWGAGPGAHSHLG----DVRLWNTKHPVA 321

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           W   +      V   E + ++ +  E +M+G+RLREGI +
Sbjct: 322 WAGQIATGHLPVAGHEAIDADSRELERIMLGIRLREGIEL 361


>gi|148272742|ref|YP_001222303.1| coproporphyrinogen III oxidase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830672|emb|CAN01608.1| oxygen-independent coproporphyrinogen III oxidase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 407

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 11/339 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQW----MRQLT 66
           G  + + GVY+H PFC  +C YCDFN++      G  Q ++    + E+++    +R   
Sbjct: 24  GADARAFGVYLHVPFCRVRCGYCDFNTYTAPELRGVRQSDYASQAVQEVRFAGSSLRDSG 83

Query: 67  GP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            P RS S++F GGGTP+L+  +++  +LD + + + ++   E+T EANP SV+       
Sbjct: 84  IPARSASTVFLGGGTPTLLPVEDLVRMLDAVRETFGLAEGAEVTTEANPDSVDDAYLAAL 143

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G  R+S G+QS   + L  L R H+ +     +  AR     +S DLIY  P +T+ 
Sbjct: 144 AAGGFTRVSFGMQSAVPRVLATLERTHDPARIAPVVRGARAAGLEVSLDLIYGTPGETID 203

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   L++A++   DHLS Y L +E GT   +  +  ++  P E++  D+Y L   +   
Sbjct: 204 DWRASLEQAIAQEPDHLSAYALIVEPGTKLARQIRRDEVPEPDEDLQADMYELADRMLGE 263

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G  S HNL YW+  D+ G+GPGAHS V      V     KHP ++ 
Sbjct: 264 AGYEWYEVSNWARDGRRSRHNLAYWQGHDWWGVGPGAHSHVG----GVRWWNVKHPAAYA 319

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
             V         +E L    +  E +++G R+R+G+++ 
Sbjct: 320 DRVLAGASPGAGRESLDDATREVERVLLGARIRDGLAIP 358


>gi|77407971|ref|ZP_00784721.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae COH1]
 gi|77173429|gb|EAO76548.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae COH1]
          Length = 376

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 207/379 (54%), Gaps = 17/379 (4%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++Q+ + E +    +T  R++   + GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLQALIREFRSY-DITELRTL---YIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I    +  +L  ++++  +++  E TIEANP  + V+  +  +K+ VNR+SLGVQ+ 
Sbjct: 63  PTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+HN  +  + I   +   F  +S DLIYALP QTM      + +ALS  +
Sbjct: 123 NDKHLKRIGRSHNEVQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEISN +  
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A + +E
Sbjct: 243 GFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNARLSEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRL 376
            LS  +  +E L +GLR ++G+S+  +E   G + +    +  + LQ  G ++      +
Sbjct: 298 VLSKNEMMEEELFLGLRKKKGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENN-GFI 356

Query: 377 RCTQRGMTMLDSVIANLAV 395
           + T++G+ + D+V     V
Sbjct: 357 QMTKKGLFLGDTVAEKFIV 375


>gi|19746022|ref|NP_607158.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS8232]
 gi|19748188|gb|AAL97657.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes
           MGAS8232]
          Length = 376

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 203/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFESY----DIHDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+  
Sbjct: 64  TAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE----RNLQRQGFIERVQFSRL 376
           L  E+  +E L +GLR + G+S++ ++   G + + EC     R LQ QG + +   + +
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFE-ECYGNIVRELQNQGLLVKDD-AFV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 357 RMTKKGLFLGDSV 369


>gi|189347661|ref|YP_001944190.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           limicola DSM 245]
 gi|189341808|gb|ACD91211.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           limicola DSM 245]
          Length = 390

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 170/327 (51%), Gaps = 7/327 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC ++C YCDF    R   +  + F ++   E      L   R + S+ FGG
Sbjct: 18  LSLYVHVPFCRRRCSYCDFFLVTRLDHI--DAFFKALAVETLAAAPLLRGRRVKSVHFGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +A  LD  A   T +S+VEI +EANP     N     + AG+NR+SLGVQ
Sbjct: 76  GTPSLVPVRLLAGWLDLAASLCTFTSDVEIALEANPEDFGGNFMAELQAAGINRLSLGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR H A EA      A N F  +S DLI  +P +T+ +W  +LQ ALS A
Sbjct: 136 SFLSRKLSALGRLHTAGEASVITAEALNRFAAVSVDLICGVPGETLPEWSSDLQAALSLA 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S+Y L++E  TL  +    G + +P E V   +Y     +    G   YE+SN + 
Sbjct: 196 VPHISVYMLSVEPKTLLQRSIAKGRVRVPDETVQALMYAAAIDVLGGSGYRHYEVSNFAL 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            G +S +NL  W    Y+G GP AHS ++  GS R       +  + L+ +      V  
Sbjct: 256 SGHDSRYNLACWMREPYLGFGPSAHSFMRNDGSERRW----ANAGTLLRYLDNPQECVAF 311

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVK 344
           +E LS E +  E + + LR+  G+ V+
Sbjct: 312 EEILSEEDRFVEQVFLTLRINRGLDVE 338


>gi|292670103|ref|ZP_06603529.1| coproporphyrinogen dehydrogenase [Selenomonas noxia ATCC 43541]
 gi|292648291|gb|EFF66263.1| coproporphyrinogen dehydrogenase [Selenomonas noxia ATCC 43541]
          Length = 385

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 207/386 (53%), Gaps = 19/386 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---- 70
           S + G+Y H P+CVKKC YCDF ++ V   +   E++  +   E+  +R+    R+    
Sbjct: 3   SKAWGIYAHIPYCVKKCAYCDFISAAVGTNEAEMEDYAAALRAEI--LREAPPLRARFGD 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            ++I+ GGGTP+++    +A I++ I +     +  E T+EANP +V+ ++    R AG 
Sbjct: 61  AATIYIGGGTPTVLPAALLAGIIETIRE--AAGTPTECTVEANPGTVDEDDLTQLRAAGA 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +R+SLGVQS +++ LR +GR H A+EA AA H AR   F  +S DL+Y LP QT+   + 
Sbjct: 119 DRLSLGVQSFDDRLLRVIGRIHTAAEARAAFHAARAAGFRNISIDLMYGLPTQTLADLKH 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +  AL+ A +H+S+Y L +E+GT F      G L LP+E+ A ++Y+       A G  
Sbjct: 179 SVAAALALAPEHISVYGLIVEEGTPFAAAEAAGRLALPTEDAAEEMYDWLMGELPAQGFV 238

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G ES HNL YWR   Y+G+G GAH      +  V  + E    +++  +R
Sbjct: 239 RYEISNFARAGFESRHNLGYWRSVPYLGVGAGAHGY----ADGVRWANESDTHAYISGIR 294

Query: 310 KNGHAVVEKEFLSSEQQA-DEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQ 365
            +      ++   +   A +E+  + LR  EGI  +D+    G  +D    +       Q
Sbjct: 295 ADMSVRTPEDAERTRANAMEEYAFLALRTAEGIDEEDFRRTFGAAMDEVYADVIAKYTAQ 354

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIA 391
           G + R + + +  T+ GM + + V A
Sbjct: 355 GLLRRSE-NHVALTEAGMKLGNEVFA 379


>gi|69954026|gb|AAZ04347.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga sp. RQ2]
          Length = 374

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 167/337 (49%), Gaps = 17/337 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSI 74
            L VYVH PFC KKC YCDF      Y V  E+F   +     E++  R +     I ++
Sbjct: 2   KLAVYVHIPFCKKKCXYCDF------YSVASEDFEEYLSLVFEEIELYRDVLKESEIETV 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+ P  +  IL+ + +     S +E TIE NP SV+    + YRK G+NRIS
Sbjct: 56  YFGGGTPSLVPPSFLEKILEKLKEVSKKFSPLETTIEVNPESVDREKLRSYRKMGINRIS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS ++  L+  GR ++         L    F  ++FD I  LP +T    E  L   
Sbjct: 116 LGVQSCDDGVLKKCGRLYDEKMLKEKAELVLAEFDNVNFDFILGLPGETDETLEKNLHFL 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   H+SLY L +++ T  Y + K   L LP  +     +++      + G   YEIS
Sbjct: 176 EEFTPQHVSLYFLEVDENTPLYSLLKKNLLTLPDSDEVERRHDVFVEFLKSRGFERYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKNG 312
           N +    ES HNL YWR  DY+G GP A      G H  R   +       + KMV++  
Sbjct: 236 NFARPERESRHNLFYWRNHDYLGFGPSA------GGHLGRFRYTNVSDLSMYAKMVKEKT 289

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                +   S +++A E L MGLR +EG+ +K  E L
Sbjct: 290 FPYDYRHENSEDEEALETLFMGLRTKEGVELKRVERL 326


>gi|315221708|ref|ZP_07863624.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus anginosus F0211]
 gi|315189195|gb|EFU22894.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus anginosus F0211]
          Length = 376

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 202/375 (53%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + ++L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDAYLEHLLQEYTSYDIKHLQTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  Q +  +L  + K   +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAQQLEFLLAELTKKLDLSLLEELTIEANPGDLDPDKIAVLKDSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E IA + LA   F  +S DLIYALPKQTM      + +A++ 
Sbjct: 123 DDRMLKQIGRSHLEKDIYENIANLKLAG--FDNISIDLIYALPKQTMDNVRENVAKAIAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E++  +++          G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIEELEKAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V K G+A V 
Sbjct: 241 KPGFESQHNLMYWDNAEYFGIGAGASGYVNGVRYKNHGPI-RH---YLEAVEK-GNARVS 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFS 374
           +E LS ++  +E + +GLR + G+S K +E   G + D +  +    L  QG +   +  
Sbjct: 296 EEHLSKQEMMEEEMFLGLRKKSGVSKKRFEEKFGVSFDRQYGQVVTELTEQGLLVPDK-E 354

Query: 375 RLRCTQRGMTMLDSV 389
            +R T++G+ + D+V
Sbjct: 355 IVRMTKKGLFLGDTV 369


>gi|119358143|ref|YP_912787.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium phaeobacteroides DSM 266]
 gi|119355492|gb|ABL66363.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 374

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 178/326 (54%), Gaps = 7/326 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC  +C YCDF    R+  V  + F ++ L E +    L   RS+ +I FGG
Sbjct: 2   LSLYVHIPFCRTRCSYCDFYLVTRQDLV--DPFFEALLAETRARLSLLKGRSVKAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++   L+  +   + + +VEIT+EANP  +          AG+NR+S+GVQ
Sbjct: 60  GTPSLLPVRHLVRWLELASTYCSFTPDVEITLEANPEDLAGGRMFELHAAGINRLSIGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L  LGR+H   +A+ A+  A ++F  +S DLI A+P +T  +W  +L+ A +  
Sbjct: 120 SFIQRKLAALGRSHTREDALRAVRAAGDLFQSVSVDLICAVPCETRDEWASDLRDATALQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS+Y L++E  T  ++    G++ +P E++   LY       + HG   YE+SN S 
Sbjct: 180 LPHLSVYMLSVEPKTRLHRKVSRGEVTVPDEDIQATLYEDALGNLAGHGYRHYEVSNFSV 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVVE 317
            G  S +NL  W    YIG GP AHS ++ G     + I +   S L + +    +AV  
Sbjct: 240 EGHHSRYNLACWMREPYIGFGPSAHSFIREG----GVEIRQANVSVLSRYIADPQNAVTF 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV 343
            E LS +++  E + + LR+  G+ +
Sbjct: 296 YEELSEKERFLEQVFLTLRINSGLDI 321


>gi|170289429|ref|YP_001739667.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga sp.
           RQ2]
 gi|170176932|gb|ACB09984.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga sp.
           RQ2]
          Length = 374

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 167/337 (49%), Gaps = 17/337 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSI 74
            L VYVH PFC KKC YCDF      Y V  E+F   +     E++  R +     I ++
Sbjct: 2   KLAVYVHIPFCKKKCVYCDF------YSVASEDFEEYLSLVFEEIELYRDVLKESEIETV 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+ P  +  IL+ + +     S +E TIE NP SV+    + YRK G+NRIS
Sbjct: 56  YFGGGTPSLVPPSFLEKILEKLKEVSKKFSPLETTIEVNPESVDREKLRSYRKMGINRIS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS ++  L+  GR ++         L    F  ++FD I  LP +T    E  L   
Sbjct: 116 LGVQSCDDGVLKKCGRLYDEKMLKEKAELVLAEFDNVNFDFILGLPGETDETLEKNLHFL 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   H+SLY L +++ T  Y + K   L LP  +     +++      + G   YEIS
Sbjct: 176 EEFTPQHVSLYFLEVDENTPLYSLLKKNLLTLPDSDEVERRHDVFVEFLKSRGFERYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKNG 312
           N +    ES HNL YWR  DY+G GP A      G H  R   +       + KMV++  
Sbjct: 236 NFARPERESRHNLFYWRNHDYLGFGPSA------GGHLGRFRYTNVSDLSMYAKMVKEKT 289

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                +   S +++A E L MGLR +EG+ +K  E L
Sbjct: 290 FPYDYRHENSEDEEALETLFMGLRTKEGVELKRVERL 326


>gi|296120959|ref|YP_003628737.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           limnophilus DSM 3776]
 gi|296013299|gb|ADG66538.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           limnophilus DSM 3776]
          Length = 380

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 186/382 (48%), Gaps = 14/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
           +N   VY+H PFC  +C YCDF         G+++ I  +L  ++  M+    P  + ++
Sbjct: 8   NNFQSVYIHVPFCRHRCGYCDFT-----LVAGRDDLIPRYLAALEREMQAHDQPLVVQTV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTP+ +    +  +L  + + + ++   E +IEANP  +          AG NR+S
Sbjct: 63  FFGGGTPTHLPIVELEQLLKMVTRRFPLADGGEFSIEANPLDMTEEVIDVLHSAGCNRVS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS + + L+ L R+H   E    +   R   P +S DLI+ +P QT+  WE +L++A
Sbjct: 123 LGVQSFQNKHLQTLERDHQGGEIPEIVQRIRARIPNVSLDLIFGVPGQTLVDWEYDLEQA 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+    HLS Y LT E+GT F    + G L    E +  ++Y L        G   YE+S
Sbjct: 183 LACGPTHLSTYGLTFEEGTAFTTRKRRGQLTEIDEALEREMYALAIKRLQEEGFEHYELS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +  HNL YW    Y   GPGA S ++ G+ R      +    +L  + +    
Sbjct: 243 NFARPGYQCQHNLAYWNGSPYAAFGPGAASYLQ-GTRRTNT---RSVLGYLSRMEQGASV 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
           + E E L  E    E L +GLR   G+   +++   G +L     E  + L RQG +   
Sbjct: 299 IAEAETLEKEHAMREALYVGLRRLSGMDYAEFQHRFGIDLQEFAAETIQRLVRQGLLAAD 358

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
           +  R+R T  G+ + + V+A  
Sbjct: 359 E-KRIRLTSEGIFLANRVMAEF 379


>gi|229820237|ref|YP_002881763.1| oxygen-independent coproporphyrinogen III oxidase [Beutenbergia
           cavernae DSM 12333]
 gi|229566150|gb|ACQ80001.1| oxygen-independent coproporphyrinogen III oxidase [Beutenbergia
           cavernae DSM 12333]
          Length = 405

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 33/350 (9%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV------------------RRYKVGQENFI 52
           + G    + GVY+H PFC  +C YCDFN++                   R   +      
Sbjct: 21  LPGADERAFGVYLHVPFCRVRCGYCDFNTYTASELGGGASQAAYAATAQREIALAARVLA 80

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
            S L E          R + ++F GGGTP+L+ P ++A ++  +   W ++   E+T EA
Sbjct: 81  SSGLPE----------RRVETVFVGGGTPTLLPPGDLAGLVRAVDDAWGLAPGAEVTTEA 130

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           NP SV   +      AG  R+S G+QS     L  L R H+ +   A +  AR+    +S
Sbjct: 131 NPDSVTPESLAALADAGFTRVSFGMQSAVPHVLATLDRTHDPARLPAVVAWARDAGLAVS 190

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY  P +T+  W + L++A++   DH+S Y L +E GT   +    G+L  P  +  
Sbjct: 191 LDLIYGTPGETLDDWRVSLEKAVALDPDHVSAYALVVEPGTAMGRQAARGELPAPDGDDE 250

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
              Y L  ++ +  G   YEISN +   A E  HNL YWR  D+ GIGPGAHS V     
Sbjct: 251 AAKYELADAVLADAGYSWYEISNFARTSADECRHNLAYWRGDDWWGIGPGAHSHVG---- 306

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
            V     KHP ++   +         +E L  + +  E +++G+RL  G+
Sbjct: 307 GVRWWNVKHPRAYAGRLEAATSPAAGRETLDDDARELERVLLGIRLATGL 356


>gi|297569909|ref|YP_003691253.1| oxygen-independent coproporphyrinogen III oxidase [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925824|gb|ADH86634.1| oxygen-independent coproporphyrinogen III oxidase [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 379

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 173/329 (52%), Gaps = 13/329 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSF---LTEMQWMRQLTGPRSISSIF 75
           G+Y+H PFC  KC YC F+S   RR   G    + +    L E+ W ++    +  +++F
Sbjct: 6   GIYLHIPFCRSKCSYCAFSSWPCRRPPAGYPAALLAQARQLAELPWSQE----KKFATLF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP++     +  +L G+ K + +    EI++EANP ++     +  R+ G NRIS+
Sbjct: 62  VGGGTPTIYPAPVLTDLLAGLGKLFRLDPEAEISLEANPDTLTPELLRQLRRGGFNRISI 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  +Q L  +GR H+ ++A  A+  AR   F  ++ DL+Y LP Q+  QW  ++  A
Sbjct: 122 GVQSFHDQLLHRIGRRHDGAKARQAVAWARQAGFANLNLDLMYGLPGQSRRQWRADIATA 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +HL++YQLT E  T   +    G LVLP  +++ +L    +    A G   YE++
Sbjct: 182 LELQPEHLAIYQLTPEAETPLGRALAAGHLVLPEPDLSAELEQEARQALLAAGYQHYEVA 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N+   G    HNLNYW  G Y+G+G  A S +  G   V ++    P  + +++      
Sbjct: 242 NYCRPGRACRHNLNYWHNGSYLGLGAAAVSCLD-GLRLVNVAA---PGRYRRLLAAGRAP 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISV 343
             E E L       E ++MGLRLR+G+ V
Sbjct: 298 YAEAELLGRPAAFRETVIMGLRLRQGLRV 326


>gi|297559674|ref|YP_003678648.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296844122|gb|ADH66142.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 410

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 195/393 (49%), Gaps = 23/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--------ENFIQSFLTEMQWM-RQL 65
           G   LG YVH PFCV +C YCDFN++     V +        E +    + E+    R L
Sbjct: 26  GGRPLGFYVHVPFCVTRCGYCDFNTYTAEELVSRDGTATASRETYADQAIAEVALADRVL 85

Query: 66  TGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           TG R  +S++F GGGTP+L+  +++  ++  + + +  + + E+T EANP +V  +    
Sbjct: 86  TGERPPVSTLFVGGGTPTLLSAEDLGRVVTAVRERFGFTPDAELTTEANPETVTPDYLAR 145

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+AG  R+S G+QS  E  LR L R H           AR   F  ++ DLIY  P + 
Sbjct: 146 LREAGFTRVSFGMQSAREHVLRVLERGHTPGRPEQCAEWARRAGFEHVNLDLIYGTPGEG 205

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W   L+ A+S   DH+S Y L +E+GT      + G+L  P ++   D Y + + + 
Sbjct: 206 DEDWRASLEAAVSAGPDHVSAYSLIVEEGTRLAARVRRGELAEPDDDTMADRYLMAEEVL 265

Query: 244 SAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +A G  AYE+SN +      S HNL YW  G + G+GPGAHS V  G+    +   KHP 
Sbjct: 266 TAAGFSAYEVSNWARTEQGRSRHNLLYWTGGHWWGVGPGAHSHVG-GTRWWNV---KHPA 321

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           ++   +       + +E L+ E++  E +++ LR+  G  +   ++L     D    +  
Sbjct: 322 AYAARLAAGHSPGLAREVLTEEERRFERVLLELRVEGGCPL---DLLEPHGRD--AAKRA 376

Query: 363 QRQGFIERV--QFSRLRCTQRGMTMLDSVIANL 393
             +G ++    +  R   T RG  + D+V+ +L
Sbjct: 377 VAEGLLDADAHEEGRAALTLRGRLLADAVVRDL 409


>gi|282600334|ref|ZP_05973911.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rustigianii DSM 4541]
 gi|282565576|gb|EFB71111.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rustigianii DSM 4541]
          Length = 350

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 170/309 (55%), Gaps = 11/309 (3%)

Query: 45  KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS 104
           ++ Q  +++  L ++     L G R + +IF GGGTPSL+  +++ +++DGI +   +  
Sbjct: 4   EIPQVEYVEHLLHDLDSDVGLIGSRPVKTIFIGGGTPSLLSAKSMQMLMDGIRQRVNLDP 63

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           + E+T+EANP +VE   F GY+ AG+NRIS+GVQS     L  LGR H   EA  A  LA
Sbjct: 64  DAEVTMEANPGTVEAERFAGYQAAGINRISIGVQSFGNDKLITLGRIHGPDEAKRAAKLA 123

Query: 165 RNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            N+  R  + DL++ LP QT  +   +L++A+  A  HLS YQLTIE  T F        
Sbjct: 124 TNLHLRSFNLDLMHGLPSQTRDEGLSDLRQAIELAPPHLSWYQLTIEPNTQFGSRPP--- 180

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
             LP ++   D+Y     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH
Sbjct: 181 -TLPDDDTLWDIYTEGHKLLSAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAH 239

Query: 284 SRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            ++     ++  +++ KHP  +++     G  +  +  + +E +  E+ M   RL E + 
Sbjct: 240 GKITSTDGQILRTVKTKHPRGYME-----GRYLDNRYNVENEDRPFEYFMNRFRLLESMP 294

Query: 343 VKDWEMLAG 351
             ++    G
Sbjct: 295 RSEFTEYTG 303


>gi|332877539|ref|ZP_08445286.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684645|gb|EGJ57495.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 396

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 207/397 (52%), Gaps = 31/397 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSISSIF 75
           G+Y+H PFC  +C YCDF S    Y    + +I +   E++    +++Q      I +I+
Sbjct: 3   GIYIHIPFCTSRCVYCDFYSTT--YGEKDKAYISALTNELRLRANYLQQDGQMPVIETIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++   +  I + + + + VS   EITIEANP  +     +  R   VNR+S+
Sbjct: 61  IGGGTPSTLDTSLLEPIFEVLYRTYHVSDRAEITIEANPDDLTPQKIKSLRTLPVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ ++  LR L R HN  +AI A+H  ++  F  +S DLIY LP Q++ +WE ++  A
Sbjct: 121 GVQTFDDGKLRLLHRRHNGEQAIRAVHDCQDAGFDNISIDLIYGLPAQSLREWETDVNTA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  V H+S Y L  E+GT  ++M K   +    E +++++++L        G   YEIS
Sbjct: 181 LSLNVQHISAYALIYEEGTPLWEMRKRHVVEEADEELSLEMFSLLMYRLENAGFEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE--SWLKMVRK-- 310
           N +  G  S HN +YW+   Y+G GP AHS    G +R       HP+   ++  V K  
Sbjct: 241 NFARPGLRSRHNSSYWKGIPYLGCGPSAHS--FDGRNRQW----NHPDLNVYIDQVGKCL 294

Query: 311 -----NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ-- 363
                N    +E+E L+  ++ ++ ++  LR  +G+++ + +   G+ L   C +     
Sbjct: 295 SSEDFNHAPWIEQEELNLYERYNDCIITSLRTSDGLNLSELKRKFGQPLTDYCLQAAAVH 354

Query: 364 -RQGFIERVQFSR------LRCTQRGMTMLDSVIANL 393
            R G +E  +         L+ T+RG+ + D ++++L
Sbjct: 355 LRNGQLEITEKKEQAPEGLLKLTRRGIFLSDGIMSDL 391


>gi|298530638|ref|ZP_07018040.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510012|gb|EFI33916.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 375

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 195/375 (52%), Gaps = 12/375 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S     +     +++    E++   +    R ++SI+ GGGT
Sbjct: 3   LYIHVPFCRTKCAYCAFASQ-EYIQEPAAVYLRLVQQELEVRSRQIQHRKVTSIYMGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQS 139
           P+++   ++A I+D + KN+      E T+EANP ++ E+++ Q +   G+NRISLG+QS
Sbjct: 62  PTVLPVASLARIVDAVYKNFDPVPGCEFTLEANPENILEMDDLQVFSSMGINRISLGMQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++Q L  L R H++ +AI A  + R   F  +S D I+ +P QT+  W  EL  A+  A
Sbjct: 122 LDDQLLGTLERGHDSRQAIKAARMIRQAGFALLSLDFIWGIPGQTLKGWLGELAHAVHLA 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y L +E GT      + G+L +P E     +Y        + G   YEISN + 
Sbjct: 182 PDHLSCYGLGLEPGTRLTARIRAGELEMPEERAQARMYMHGAEYLESCGFLQYEISNFAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G    HNL YW    ++G GP A S +     +   +I  +     + +     + +E 
Sbjct: 242 MGYSCKHNLGYWAGEPFLGAGPSAVSTIDGTRWQNPPAIRDY-----QTLGGKNFSDLEF 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFSR 375
           E LS  ++ +E +M+ LR   G+++ D++ L G++         + L +   I R+    
Sbjct: 297 EKLSYTRKVNELVMLSLRTSRGLNLHDYKHLTGQSFSRRYAGIIKALHQNNLI-RMAHGY 355

Query: 376 LRCTQRGMTMLDSVI 390
           LR T+ GM + DS++
Sbjct: 356 LRLTRNGMLVSDSIL 370


>gi|313886793|ref|ZP_07820499.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923757|gb|EFR34560.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas asaccharolytica PR426713P-I]
          Length = 371

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 189/383 (49%), Gaps = 22/383 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-------WMRQLTGPRSIS 72
           G+Y+H PFC  +C YCDF S        Q  F+++   E+        W    T PR+I 
Sbjct: 3   GLYLHIPFCPTRCIYCDFYSQSDLSL--QSAFVEALCRELTIYCDRGLWA---TAPRTI- 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             + GGGTPS +    +  ++  I   W +  ++EITIEANP  V     +G  + G NR
Sbjct: 57  --YLGGGTPSSLPLPLLERLMQHIRSLWRLDKSIEITIEANPEDVSPEWARGVAQLGFNR 114

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQSL +++LRFL R H+A++A  AI   R      +S DLI+ALPK     W   L
Sbjct: 115 ISLGVQSLSDETLRFLQRRHSAAQAELAISYIREAGISNVSIDLIFALPKGYEQHWFESL 174

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL   V HLS Y LT E GT   +M + G +   SE   V  Y    +     G   Y
Sbjct: 175 AHALVLPVTHLSAYGLTYESGTRLDRMRESGAVTPSSEETYVKQYYALVAACQKAGFTHY 234

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G  S HN  YW    Y+G+GP AHS   +  HR     + H   +++ ++++
Sbjct: 235 ELSNWALPGFASQHNSAYWDGTPYLGLGPSAHS--YMARHRWWNLSDIH--LYIERLQQD 290

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              + ++E+LS  + ++E +M+GLR   GI ++   +L G  L       L  QG +   
Sbjct: 291 TLPIADEEWLSLTELSEECIMLGLRTSRGIDLRR-PVLQGVPLMDRATPWLD-QGLLTYT 348

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               LR T  G+   D +   L 
Sbjct: 349 ADDHLRLTHEGLIWCDRICTALC 371


>gi|329767730|ref|ZP_08259246.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans M341]
 gi|328838831|gb|EGF88425.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans M341]
          Length = 377

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 207/371 (55%), Gaps = 20/371 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           GVY+H PFC   C YCDFN  +++R  V  + +I   + E++ M  +   +++ +I+ GG
Sbjct: 7   GVYIHIPFCKYICSYCDFNKFYIQRQPV--DKYIDCLIKEIESMENI---QNVETIYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  +L  + +N       E T EANP  +  +     +  GVNRIS+GVQ
Sbjct: 62  GTPSALSDEQLHRLLTAL-RNKIPQQLREFTFEANPEDLVDSRVALVKGYGVNRISMGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   + L+ LGR H A +   AI +  ++    ++ DL+++LPKQTM      +++   Y
Sbjct: 121 TFNNELLKILGRGHVADDVDMAIANCKKHGIEDINVDLMFSLPKQTMDDLYDSMKKVAEY 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E+ T  Y   +D  + LPS      +YN   +  + +G   YEISN +
Sbjct: 181 NISHISCYSLILEQKTKLYNQVRDKKVTLPSNETEEKMYNEVINFLTENGYEQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN +YW+  +Y G+G GAH  +    +    +++ + +S L    + GHA  E
Sbjct: 241 RPGHESVHNSSYWKNIEYYGLGAGAHGYIDGVRYANQGALKFYIDSML----EKGHARRE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DIECERNLQRQGFIERVQ 372
           +  ++++++ +E + +GLRL +G+ +  +E   G+       D+  ++N+ R+G++E ++
Sbjct: 297 ENTVTTKEKIEEEMFLGLRLLKGVDLDIFEEKYGKRAEEIFKDV-IDKNI-REGYLE-IE 353

Query: 373 FSRLRCTQRGM 383
            ++LR T++G+
Sbjct: 354 DNKLRLTRKGL 364


>gi|84496862|ref|ZP_00995716.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Janibacter sp. HTCC2649]
 gi|84383630|gb|EAP99511.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Janibacter sp. HTCC2649]
          Length = 424

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 195/389 (50%), Gaps = 20/389 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTG---P 68
           G    G+Y+H PFC  +C YCDFN++             FI + L E+   + + G   P
Sbjct: 25  GKRPFGIYLHVPFCRVRCGYCDFNTYTLTELGPGASTSTFIDTTLAELDLAQAVLGDSAP 84

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R + +IF GGGTP+++   ++   +DGI   + ++ +VE+T EANP SV  ++ +     
Sbjct: 85  R-VDTIFVGGGTPTMLAAADLVKAVDGIRDRFGLADDVEVTTEANPDSVTPDSLRELADG 143

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G  RISLG+QS     L  L R H+ +    A+  A++     S DLIY  P +++  W 
Sbjct: 144 GFTRISLGMQSAVPHVLATLDRTHDPAGVEKAVRAAQDAGMVTSVDLIYGTPGESVDDWR 203

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L +A+S   +H+S Y L +E+GT      + G++  P ++     Y +   + SA G 
Sbjct: 204 RSLDQAISLESEHVSAYALVVEEGTKLAAQVRRGEVARPDDDDEATKYEIADEVLSAAGF 263

Query: 249 HAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             YE+SN +   A    HN  YW  GD+ G+GPGAHS V      V     KHP ++   
Sbjct: 264 GWYEVSNWTRTPAGRCRHNDGYWTGGDWWGVGPGAHSHVG----GVRWWNVKHPRAYAGR 319

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +         +E L++EQ  DE +++ +R+R+G+ V D + +  R +       L   G 
Sbjct: 320 LTDGLSPGAGRETLTAEQVRDEQVLLQVRVRDGLVVDDLDDIGRRAV-----AGLVADGL 374

Query: 368 IE---RVQFSRLRCTQRGMTMLDSVIANL 393
           ++    V+  R+  T RG  + D+V+  L
Sbjct: 375 VDGTAAVRDRRVVLTLRGRLLADTVVRRL 403


>gi|189461462|ref|ZP_03010247.1| hypothetical protein BACCOP_02118 [Bacteroides coprocola DSM 17136]
 gi|189431796|gb|EDV00781.1| hypothetical protein BACCOP_02118 [Bacteroides coprocola DSM 17136]
          Length = 384

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 196/379 (51%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S  +  K  + ++I +   E++  +       I +I+ GGG
Sbjct: 11  GIYLHIPFCKRRCIYCDFYSTTQNEK--KSSYINALCRELEERKNYLEGEKIETIYLGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++  LI   + + + +  N EITIEANP  +  +     R+   NR+S+G+Q+
Sbjct: 69  TPSQLEYKDFELIFQTLGRLYDIQPNAEITIEANPDDLTSSYVSMLREFPFNRLSMGIQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E  LR L R H A +AI A    R   F  +S DL+Y LP ++M  WE +L +A+   
Sbjct: 129 FQEDILRLLHRRHTAQQAIDAFERCRKAGFKNISIDLMYGLPGESMQTWESDLNQAIRMK 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E ++V L+ L        G   YEISN   
Sbjct: 189 PEHISAYHLIYEEGTALWKLREQHRMEEADEELSVSLFTLLIHKLKEKGYQHYEISNFCL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   V       S++++  +        G    E 
Sbjct: 249 PGMYSRHNSSYWTGKKYLGCGPSAHSYNGVSRQWNISSLDEYITNI-----NEGEPYSEI 303

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQFS 374
           E L+   + ++F++  +R   G+++   +   G  L   C R    +LQ QG +E+ +  
Sbjct: 304 EELNLYTRYNDFVITTIRTMWGMNLDMLKKTFGSKLYDYCLRMAYPHLQ-QGTLEQPE-G 361

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L+ T++G+ + D +++++
Sbjct: 362 VLKLTEKGIFISDGIMSDM 380


>gi|225016711|ref|ZP_03705903.1| hypothetical protein CLOSTMETH_00621 [Clostridium methylpentosum
           DSM 5476]
 gi|224950515|gb|EEG31724.1| hypothetical protein CLOSTMETH_00621 [Clostridium methylpentosum
           DSM 5476]
          Length = 369

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 198/390 (50%), Gaps = 45/390 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH PFC  KCPYCDF S     ++ +E ++++ L E++   +  G R+  +++FGG
Sbjct: 2   LGIYVHIPFCNGKCPYCDFYSLAGDEEI-KERYVEAVLRELEEAHR-DGMRA-DTLYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L+ PQ +  I     + + +  N EIT EANP+SV  N     R++G+NRIS GVQ
Sbjct: 59  GTPTLLSPQQLGRITTQARRLYELQ-NAEITTEANPNSVTFNQLDSLRQSGINRISFGVQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ LGR H A++A  AI LA+   F  +S DL+  +P QT       L      
Sbjct: 118 SAVDAELKLLGRRHTAAQAEQAITLAKQAGFDNISCDLMLGIPNQTAQSLAQSLDWINRQ 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVL---PSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + H+S Y L IE  T ++     G  VL   PS++   DLY  T    +  G   YEIS
Sbjct: 178 NIQHVSAYLLKIEPSTPYF-----GSEVLKLCPSDDTCADLYLQTVRSLTQMGFEQYEIS 232

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW+  +Y+G+G  AHS +    +  +  +E++    L+ V+     
Sbjct: 233 NFSIPGLESRHNLKYWQCEEYLGVGAAAHSFLNGRRYGHSRKLERYLALGLQDVQFTDEN 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF- 373
               E         E LM+GLRL  G+++   + L               +GF++RV   
Sbjct: 293 AGGME---------ERLMLGLRLNRGMALDSLKGLH------------NPKGFLDRVDAY 331

Query: 374 ----------SRLRCTQRGMTMLDSVIANL 393
                     +R+  T  G  + ++++++L
Sbjct: 332 KALGLLTVSGNRIALTPEGFLLSNTILSDL 361


>gi|254431804|ref|ZP_05045507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cyanobium sp. PCC 7001]
 gi|197626257|gb|EDY38816.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cyanobium sp. PCC 7001]
          Length = 431

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 171/340 (50%), Gaps = 16/340 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQW-MRQLTGPRSISS 73
            Y+H PFC ++C YCDF       + G          I ++L  ++  + Q  G   +S+
Sbjct: 8   AYLHIPFCHRRCFYCDFPIVPLGDRAGPAPGQPGAASIDAYLALLRREIGQAPGATPLST 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL+EP  I  ++  + + + ++   EIT+E +P+S +    +GY  AGVNR+
Sbjct: 68  VYFGGGTPSLLEPTQIGELVRDLRRQFGLAPGAEITLELDPASFDRQRLRGYLAAGVNRV 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-----NIFPRMSFDLIYALPKQTMTQWE 188
           SLG QS ++  L+ LGR H+  +   A    R           S DLI A+P QT+  W 
Sbjct: 128 SLGGQSFDDGVLQQLGRRHSGGDLREAAGWLRQAHRSGALGSWSLDLIQAVPGQTLPAWR 187

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L+ A+     HLS+Y LTIE GT+F +  + G L LP +++A DL  LT S  +A G 
Sbjct: 188 QQLEEAIGSGAPHLSVYDLTIEPGTVFARRLEQGRLELPQDDLAADLMELTSSELAAAGY 247

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SNH+  G  S HN  YW    + G G GA S    G  +          +WL   
Sbjct: 248 GRYEVSNHALPGHASRHNRVYWSGAGWWGFGMGATS-APWGQRQARPRTRDAYRAWLTSG 306

Query: 309 RKNGHAVVEKEF---LSSEQQADEFLMMGLRLREGISVKD 345
                A         +      DE LM+GLR REG+ + +
Sbjct: 307 AAEAGAGEAGMAEIGVDPGMPLDERLMVGLRRREGVRLPE 346


>gi|163782966|ref|ZP_02177961.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
 gi|159881646|gb|EDP75155.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
          Length = 375

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 190/377 (50%), Gaps = 20/377 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KCPYCDF S VR   VG E++    L E +  R L     + +++ GGG
Sbjct: 5   GLYVHIPFCSYKCPYCDFTSLVRS-PVGFEDYTAFLLREAELYRDLN--IRLETLYLGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+ P  I  ++D +   + +S   E+T+E NP +     F+   +AGVNR+SLGVQS
Sbjct: 62  TPTLLSPGQIGALIDELGSIFDLSGLKEVTVECNPETYRFGEFRELLRAGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L+ LGR H   E++ A IH     F  +S D+IY  P Q +   E+EL+      
Sbjct: 122 FSEEGLKRLGREHGVQESLEAYIHARDAGFENVSIDIIYGYPGQRVEDIEIELESIGELN 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y LT  + T        G+L +P E    D+Y+         G   YE+SN + 
Sbjct: 182 PDHVSAYMLTPHENTPMGMKILGGELEIPEEETLGDIYDRLWKGLKGLGYERYEVSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++G+G  A      G  R   +  K+  S++K + +    +  +
Sbjct: 242 GGKECKHNLLYWTMEEFLGLGVSAWGF--FGGRRYGNT--KNVMSYVKALSEGKKPLQSE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
             L+ E   +E LM+ LRL+ G+  +D E++  R            +GF E ++  RL  
Sbjct: 298 VLLNEEDLFEEELMLRLRLKWGLGEEDMELIPER-----------LRGFFE-IKGGRLGI 345

Query: 379 TQRGMTMLDSVIANLAV 395
            +  M + + +I  + +
Sbjct: 346 REEYMLLSNEIITEVLL 362


>gi|225011447|ref|ZP_03701885.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium MS024-2A]
 gi|225003950|gb|EEG41922.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium MS024-2A]
          Length = 374

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 203/379 (53%), Gaps = 17/379 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGG 79
           +Y H+PFC + C YC+F+    + +V Q    +  L E+   + +L  P  + SI+FGGG
Sbjct: 4   LYFHYPFCKQACHYCNFHFSTNQKEVDQ--LEEGMLKELDLRLTELKTP--LESIYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           +PSL+    ++ ++      ++    +EIT+E NP  V  +  +  ++AGVNR+SLGVQS
Sbjct: 60  SPSLLSADKLSNLIHQSKAKFSFHDGIEITLEVNPDDVSKSYLKDVKEAGVNRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R H+  +A+ ++    ++F   S DLIY +P  T+ +WE  L +AL +  
Sbjct: 120 FYEKDLKLMNRAHSVDQALQSMEWVSSVFSNFSVDLIYGMPNSTLKEWETNLNQALKFNP 179

Query: 200 DHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            H+S Y LT+E+ T L+Y++ K    +L  E+V      L + + + + ++ YE SN   
Sbjct: 180 PHISTYALTVEEKTALYYQVEKGEVFLLIEEDVKAQYDFLVKRLEALNFIN-YEFSNFGK 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S++N NYW    Y+GIGP AHS     +    +S   +   ++  ++K G    E 
Sbjct: 239 KDFFSINNQNYWNGKPYLGIGPSAHSYDGASTRTWNVS---NNHKYVAALKK-GFLDNET 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFS 374
           E LS + Q +E++M+GLR  EG+S +  E   G+     L+ +  R+L+ +       F 
Sbjct: 295 ERLSKKDQYNEYVMIGLRKIEGLSKEHVEKTFGKTYAAYLESQVSRHLEERNLFWDGDF- 353

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L+ T +   + D + A+L
Sbjct: 354 -LKITPKAKFLSDGLAADL 371


>gi|326624851|gb|EGE31196.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
          Length = 345

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/291 (36%), Positives = 164/291 (56%), Gaps = 11/291 (3%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
           ++++Q  L ++         R + +IF GGGTPSL+    +  +LDG+     ++++ EI
Sbjct: 4   DDYVQHLLNDLDADVAWAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLNLAADAEI 63

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           T+EANP +VE + F  Y++AGVNRIS+GVQS  E  L+ LGR H   EAI A  LA  + 
Sbjct: 64  TMEANPGTVEADRFIDYQRAGVNRISIGVQSFSEPKLKRLGRIHGPQEAIRAARLANGLG 123

Query: 169 PR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            R  + DL++ LP QT+ +   +L++A++    HLS YQLTIE  TLF         VLP
Sbjct: 124 LRSFNLDLMHGLPDQTLEEALNDLRQAIALNPPHLSWYQLTIEPNTLFGSRPP----VLP 179

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH +V 
Sbjct: 180 DDDALWDIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKVT 239

Query: 288 VGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
               R+  + + +HP  +++     G     +  +S + +  EF M   RL
Sbjct: 240 FPGGRILRTTKTRHPRGYMQ-----GRYQESQRDVSDDDKPFEFFMNRFRL 285


>gi|332360737|gb|EGJ38545.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK355]
          Length = 376

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 204/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIKEYHSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDEEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   ++ + +A+S  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAISLDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + GHA V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVYGVRYKNHGPI-RH---YLQAV-EAGHARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGVSFEDQYGAVVSELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|331090752|ref|ZP_08339599.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 2_1_46FAA]
 gi|330399860|gb|EGG79519.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 2_1_46FAA]
          Length = 374

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 205/383 (53%), Gaps = 21/383 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFCVKKC YCDF S     +   E ++++ + E++ +  +     + ++F G
Sbjct: 4   DLELYIHIPFCVKKCAYCDFLSGPADEET-MEYYVRALIREIESIESMKEMYRVVTVFVG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++  + I  I   + + + + S  E+TIEANP +V     + YR AG+NRIS G+
Sbjct: 63  GGTPSVLGGEQIERIFAALREKFAMESVREVTIEANPGTVTREKLKAYRSAGINRISFGL 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   E + +  LAR   F  ++ DLI A+P QT+  W+  + R L 
Sbjct: 123 QSANNGELKQLGRIHTYEEFLESYMLAREEGFDNINIDLISAIPNQTVESWKSTVDRILK 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH-KDGDLVLPSENVAVD--LYNLTQSITSAHGLHAYEI 253
              +H+S Y L +E+GT F KM+ +DG+      +   +  +Y  T+      G   YEI
Sbjct: 183 LQPEHISAYSLIVEEGTPFEKMYGEDGNRKEELPSEEEERLIYQKTKKWLQEAGYERYEI 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM---VRK 310
           SN++  G    HNL YW   +Y+G+G GA S   +G+ R   + E   +++LK    VRK
Sbjct: 243 SNYAKKGYACRHNLGYWERKEYLGLGLGASSL--IGNVRFQNTEEM--KTYLKYSDDVRK 298

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                      + E++ +E + +GLR ++GIS K+ +   G  ++      +  QGF+E 
Sbjct: 299 RKQNEEVL---TKEEELEEIIFLGLRKKDGISKKEVDFFCGEQIE-----KMICQGFLEE 350

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
            +   +R T+RG+ + + V A +
Sbjct: 351 -KDGNIRLTERGIDISNYVFAEI 372


>gi|145296247|ref|YP_001139068.1| coproporphyrinogen III oxidase [Corynebacterium glutamicum R]
 gi|140846167|dbj|BAF55166.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 351

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 173/350 (49%), Gaps = 11/350 (3%)

Query: 46  VGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS 104
            G + ++ S   E++  +  L  PR   +IF GGGTPSLI    +A +L  +   + ++ 
Sbjct: 5   AGPDTYLDSLEVELEMAVASLDNPRQAETIFIGGGTPSLIGADGLARVLGAVRNTFGIAD 64

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
             E+T E+NP S     F G R+AG NRISLG+QS     L+ L R H     +AA   A
Sbjct: 65  GAEVTTESNPESTSPEFFDGLREAGYNRISLGMQSASSSVLKVLDRTHTPGRPVAAAKEA 124

Query: 165 RNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           R   F  ++ D+IY  P +T       L   L   VDH+S Y L +E GT   +  + G+
Sbjct: 125 RRAGFEHVNLDMIYGTPTETDDDVRKTLDAVLEANVDHVSAYSLIVEDGTAMARKVRKGE 184

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           L  P E+V  D + L  +   + G   YE+SN +  G E  HN+ YW  GD+ G GPGAH
Sbjct: 185 LPAPDEDVYADRFELIDARLRSAGFDWYEVSNWAKPGGECKHNMGYWVDGDWWGAGPGAH 244

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S +     R   +I KHP  +   +      + E E L++E    E +M+GLRL++G+ +
Sbjct: 245 SHI---GDRRFYNI-KHPARYSAQIAAGELPIKETEMLTAEDHHTERVMLGLRLKQGVPL 300

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +   A   +D    R++   G +       L  T  G  + D +IA++
Sbjct: 301 NLFTPAARPVID----RHIA-GGLLHVNALGNLAVTDAGRLLADGIIADI 345


>gi|332300088|ref|YP_004442009.1| oxygen-independent coproporphyrinogen III oxidase [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177151|gb|AEE12841.1| oxygen-independent coproporphyrinogen III oxidase [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 371

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 189/383 (49%), Gaps = 22/383 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-------WMRQLTGPRSIS 72
           G+Y+H PFC  +C YCDF S        Q  F+++   E+        W    T PR+I 
Sbjct: 3   GLYLHIPFCPTRCIYCDFYSQSDLSL--QSAFVEALCRELTIYCDRGLWA---TAPRTI- 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             + GGGTPS +    +  ++  I   W +  ++EITIEANP  V     +G  + G NR
Sbjct: 57  --YLGGGTPSSLPLPLLERLMQHIHSLWRLDKSIEITIEANPEDVSPEWARGVAQLGFNR 114

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQSL +++LRFL R H+A++A  AI   R      +S DLI+ALPK     W   L
Sbjct: 115 ISLGVQSLSDETLRFLQRRHSAAQAELAISYIREAGISNVSIDLIFALPKGYEQHWFESL 174

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL   V HLS Y LT E GT   +M + G +   SE   V  Y    +     G   Y
Sbjct: 175 AHALVLPVTHLSAYGLTYESGTRLDRMRESGAVTPSSEETYVKQYYALVAACRKAGFTHY 234

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G  S HN  YW    Y+G+GP AHS   +  HR     + H   +++ ++++
Sbjct: 235 ELSNWALPGFASQHNSAYWDGTPYLGLGPSAHS--YMARHRWWNLSDIH--LYIERLQQD 290

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
              + ++E+LS  + ++E +M+GLR   GI ++   +L G  L       L  QG +   
Sbjct: 291 TLPIADEEWLSLTELSEECIMLGLRTSRGIDLRR-PVLQGVPLMDRATPWLD-QGLLTYT 348

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               LR T  G+   D +   L 
Sbjct: 349 ADDHLRLTHEGLIWCDRICTALC 371


>gi|240169937|ref|ZP_04748596.1| coproporphyrinogen III oxidase [Mycobacterium kansasii ATCC 12478]
          Length = 378

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 191/378 (50%), Gaps = 13/378 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            G+YVH PFCV +C YCDFN++       V  + ++ +  TE++         +++++F 
Sbjct: 9   FGLYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLLALGTELELAAARLDAPTLNTVFV 68

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + +  +L  +   + ++ + EIT EANP S     F   R AG  R+SLG
Sbjct: 69  GGGTPSLLGGERLTRLLGMVRDCFALAPDAEITTEANPESTWPEFFDAIRAAGYTRVSLG 128

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS+  + L  L R H+   A AA   A +  F  ++ DLIY  P ++       +  A+
Sbjct: 129 MQSVAPRVLATLDRVHSPGRASAAAREAMDAGFEHVNLDLIYGTPGESDDDLLRSVAAAI 188

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VDH+S Y L +E GT   +  + G+L  P  +V    Y L  +  +A GL  YE+SN
Sbjct: 189 DAGVDHVSAYALVVEDGTALARRVRRGELSAPDGDVLAHRYELADARLTAAGLRWYEVSN 248

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNL YW  G + G GPGAH    VG+ R      KHP ++ ++V      V
Sbjct: 249 WARPGGECRHNLGYWDGGQWWGAGPGAHG--YVGATR--WWNVKHPNAYAELVAGATLPV 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E L ++    E +++ +RLR+G+ +   +     + + E  + +   G +   +  R
Sbjct: 305 AGFEQLGADALHTEDVLLKIRLRQGLPMSRLD-----SAERERAKVVLADGLLA-TEGDR 358

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T RG  + D+V+  L
Sbjct: 359 LVLTDRGRLLADAVVRTL 376


>gi|325687376|gb|EGD29397.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK72]
          Length = 376

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 200/373 (53%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDEEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 SHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I  + E+      K G A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPIRHYLEAV-----KAGDARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAVVSELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|86608370|ref|YP_477132.1| coproporphyrinogen III oxidase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556912|gb|ABD01869.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 405

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 175/332 (52%), Gaps = 18/332 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM---RQLTG-PRSISSIF 75
             Y+H PFC ++C YCDF + +   K+  E ++Q    E+      R L G PR ++SIF
Sbjct: 29  AAYLHIPFCRQRCHYCDFATGLGTRKL-METYVQMLCREIGGAYRYRHLAGDPRPLTSIF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + +  IL  + +      + EI++EANP ++      GYR+ GVNRISL
Sbjct: 88  FGGGTPSLLTVEQLGRILTQLRERIPFHPDCEISLEANPGTLTREQLAGYRELGVNRISL 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L   GR H   E   A+  L    F   + DLI+ LP QT+  W+  L+  
Sbjct: 148 GVQAFQPELLAACGRLHGVEEVYEAVADLQAAGFENFNLDLIFELPYQTLEHWQQSLRAV 207

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L     H+S+Y LTIE GT F +M++ G   LPSE   V +Y + + + +  G   YEIS
Sbjct: 208 LEINPTHVSVYDLTIEPGTRFGRMYRPGAAPLPSEETTVAMYLMARELLTEAGYIHYEIS 267

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES---WLKMVRKN 311
           N +  G    HN  YW    Y G G G  S    G  R+     + P++   + + V+  
Sbjct: 268 NFARPGYACRHNRVYWENRPYFGFGMG--SVGYEGGRRI-----QQPKTLYHYFEQVKVG 320

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            H +  +   S E+   + LM+GLRL+EG+ +
Sbjct: 321 VHPLPPEA--SPEEVWMDTLMLGLRLQEGLDL 350


>gi|148380914|ref|YP_001255455.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum A str. ATCC 3502]
 gi|148290398|emb|CAL84525.1| oxygen-independent coproporphyrinogen iii oxidase [Clostridium
           botulinum A str. ATCC 3502]
          Length = 383

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 13  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 69  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGLQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L   +  
Sbjct: 128 SSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLTVVGL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 188 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 247

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 248 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNNLTQIN 303

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 304 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 340


>gi|95931200|ref|ZP_01313922.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfuromonas acetoxidans DSM 684]
 gi|95132762|gb|EAT14439.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfuromonas acetoxidans DSM 684]
          Length = 386

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 173/339 (51%), Gaps = 3/339 (0%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            G    G+Y+H PFC +KCPYCDF S V R       ++ +   +++      G    S+
Sbjct: 6   HGDAVAGLYIHIPFCRQKCPYCDFYSEVDR-DGDLVLYVDALCRDLELSCAWYGAEPFST 64

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  +  IL+ + + + +S++VE+++E NP +V+     GY +AGVNR+
Sbjct: 65  VFFGGGTPSLLPPDQVERILNQVQRFYGLSADVEVSMEVNPGTVDCQGLHGYHQAGVNRL 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS ++  LR+L R H++ +A+A +  AR   F R++ DL++ALP Q+        +
Sbjct: 125 SIGVQSFDDDQLRWLRRIHDSRQALALVDEARRAGFERLNLDLMFALPGQSEASMVESCR 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R     V+H+++Y L++E GT        G      E      Y         HG   YE
Sbjct: 185 RIAQLDVEHVAIYGLSVEPGTPLAAAEASGRWSQSDEADYQRHYLTLSEQLIRHGFDHYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN    G    HNL YW+   Y+GIG GAHS +  G             ++L+ ++   
Sbjct: 245 ISNFCRPGEACRHNLGYWQRRPYLGIGAGAHSFLGQGDGE-RWHCPDDLNAYLRALQHGQ 303

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               + E  S  Q   E   + LR  +G+  +++ +  G
Sbjct: 304 LPRQQLETFSHGQAVSEAAYLALRCGKGVDDQEFLLRYG 342


>gi|153933683|ref|YP_001385222.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. ATCC
           19397]
 gi|226950388|ref|YP_002805479.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A2 str. Kyoto]
 gi|152929727|gb|ABS35227.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A str. ATCC 19397]
 gi|226842192|gb|ACO84858.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A2 str. Kyoto]
          Length = 380

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L   +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLTVVGL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNNLTQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|113474963|ref|YP_721024.1| coproporphyrinogen III oxidase [Trichodesmium erythraeum IMS101]
 gi|110166011|gb|ABG50551.1| coproporphyrinogen III oxidase, anaerobic [Trichodesmium erythraeum
           IMS101]
          Length = 421

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/332 (35%), Positives = 178/332 (53%), Gaps = 17/332 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENF--IQSFL----TEMQWMRQLTGPRSISSIF 75
           YVH PFC ++C YCDF   V       +NF  IQ ++     E+   +    P  + +IF
Sbjct: 15  YVHIPFCRRRCYYCDFPISVVGDGKKGDNFSPIQEYVEVICQEISTTKSFDQP--LKTIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+    ++ ILD + + + + +N EI+IE +P + ++   QGY+  GVNR+SL
Sbjct: 73  FGGGTPSLLSVGQLSRILDALEQKFGIVANAEISIEMDPGTFDLEQVQGYKFLGVNRVSL 132

Query: 136 GVQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           GVQ+ ++  L+  GR HN S+   A+  +H A  I    S DLI  LP QT+ QW++ L 
Sbjct: 133 GVQAFQDDLLQVCGRLHNVSDIYKAVNTLHQAGII--NFSIDLISGLPHQTLEQWQISLL 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++ +  H+S Y L +EK T F   +K G   LP++  A ++Y + Q + S  G   YE
Sbjct: 191 SGIAISPTHISSYDLVLEKVTAFGHYYKPGHAPLPTDETAAEMYRIAQQLISISGYEHYE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y G G GA S ++ G         K    W  ++    
Sbjct: 251 ISNYAKQGYQCSHNRVYWENHPYYGFGMGAASYLE-GQRFTRPRTRKKYYQW--VLSFQD 307

Query: 313 HAVVEKEFLSSEQQ-ADEFLMMGLRLREGISV 343
           H++  +   +S Q    E LM+G RL +GI+V
Sbjct: 308 HSLESQGINASNQDFLLETLMLGFRLAQGINV 339


>gi|226307231|ref|YP_002767191.1| coproporphyrinogen III oxidase [Rhodococcus erythropolis PR4]
 gi|226186348|dbj|BAH34452.1| coproporphyrinogen III oxidase [Rhodococcus erythropolis PR4]
          Length = 408

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 195/394 (49%), Gaps = 26/394 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQL 65
           ++ G G    G+Y+H PFC  +C YCDFN++    ++G     QS+L     E+    ++
Sbjct: 23  SLEGVGKRPFGIYIHVPFCATRCGYCDFNTYTAG-ELGTSASPQSWLEGLRRELDLAAEM 81

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           TG  +  ++F GGGTPSL+    ++ +L  +  ++ ++S  E+T E+NP S     F   
Sbjct: 82  TGAPAAKTVFVGGGTPSLLGGDGLSDVLSAVRSSFGLASGAEVTTESNPESTSPEFFDAL 141

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R AG  RISLG+QS  +  L+ L R H    A+AA   AR   F  ++ DLIY  P +  
Sbjct: 142 RSAGFTRISLGMQSAAQHVLKILDRTHTPGRAVAAAKEARAAGFSHVNLDLIYGTPGERD 201

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    S  S
Sbjct: 202 QDLDASLDAVLSADVDHVSAYALIVEDGTAMARKVRRGELPAPDDDVLASRYERIDSRLS 261

Query: 245 AHGLHAYEISNHSFLGAESL--------HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
             GLH YE+SN  +  AE+         HNL YW  GD+ G GPGAHS V      V   
Sbjct: 262 EAGLHWYEVSN--WAKAETADSGDTRCRHNLGYWDGGDWWGAGPGAHSHVG----GVRWW 315

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP  + + +      V   E L++E +  E +M+  RLR G+ +   E+ A   L  
Sbjct: 316 NVKHPARYAEQLALGELPVGGSEDLTAEDEHMERVMLTARLRTGLPLS--ELSASERLSA 373

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           E    +   G +  ++   +  T RG  + D+VI
Sbjct: 374 E---QVVVDG-LAVIENDHVVLTDRGRLLADAVI 403


>gi|160880446|ref|YP_001559414.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           phytofermentans ISDg]
 gi|160429112|gb|ABX42675.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           phytofermentans ISDg]
          Length = 408

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 181/347 (52%), Gaps = 21/347 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ--SFLT-EMQWMRQLTG 67
           M  +    L +Y+H PFC +KC YCDF S     +  Q+  ++   FL  E++    L  
Sbjct: 18  MIIRMKKDLELYIHIPFCARKCNYCDFLSG----QASQDEMLKYTDFLCKEIKNQGSLPL 73

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + SIFFGGGTPSL+  + I  I D I + + +    EITIE NP +V  +   GY  
Sbjct: 74  EYRVVSIFFGGGTPSLLPLEQIGRIFDKIKECFEIVPTCEITIECNPGTVTKDKLFGYYN 133

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             +NR+S G+QS   + LR LGR H   E +     AR + F  ++ DL+ ALP Q +  
Sbjct: 134 LEINRLSFGLQSANNEELRLLGRIHTFEEFVENYEHAREVGFQNINIDLMSALPYQNLES 193

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSIT 243
           +E  L++ L    +H+S Y L +E+GT FY+    H D    +P   +   +Y  T+ I 
Sbjct: 194 YETTLEKVLKLKPEHISAYSLILEEGTSFYERFSEHGDEKDAIPDVILDRLMYEHTKEIL 253

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDY---IGIGPGAHSRVKVGSHRVAISIEKH 300
            +HG + YEISN++  G E LHN+ YWR  DY             V+  +       EK 
Sbjct: 254 LSHGYNRYEISNYAKPGRECLHNIGYWRRIDYLGLGLGSSSLLDHVRYRNLDTMNEYEKA 313

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            +S LK VR+     VE E LS   + +EF+ +GLRL +G+S K++E
Sbjct: 314 LKSSLK-VRQ-----VE-EMLSKNAEMEEFMFLGLRLSKGVSKKEFE 353


>gi|303229101|ref|ZP_07315903.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516225|gb|EFL58165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 392

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 182/337 (54%), Gaps = 17/337 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISS 73
            +G+Y+H PFC +KC YCDF ++ +  +   + ++ + + EM  M     P+S    + +
Sbjct: 13  DMGIYIHIPFCKQKCIYCDFPAY-QNLEEYYDTYLYALVQEMT-MFGDAYPKSRTKLVDT 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    +  IL+ I  N+ VS + + TIE+NP  V+    +G  K G +RI
Sbjct: 71  VYLGGGTPTELSLLQLEQILNTIKTNYNVSPDCQFTIESNPGEVDQAYLKGLHKLGFSRI 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+  ++SL  L R+HN  +AI A+  A +  F  ++ DLIY LP QT  +    L 
Sbjct: 131 SFGVQTFNDKSLVSLHRSHNREDAINAVQWAFKEGFQDINIDLIYGLPNQTTDEINKNLD 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +  ++H+S Y L +E+GT  Y +   G + LP E+    +Y++        G   YE
Sbjct: 191 IVSTLPINHISTYGLQVEQGTRLYHLVDKGVISLPDESTEDTMYDMMMQGIQDLGFERYE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS---RVKVGSHRVAISIEKHPESWLKMVR 309
           ISN +   A S HNL YW+Y DY+G G GAHS    V+  ++R  +   +  + +     
Sbjct: 251 ISNFAKDKAYSKHNLKYWQYCDYLGFGAGAHSFFDSVRRANNRNVMPYARKIDCF----- 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                VV++E + S++  +++  + LR + GI+  D+
Sbjct: 306 --EFPVVDEEVIDSKRAREDYCFLSLRTKWGINTVDF 340


>gi|169628753|ref|YP_001702402.1| coproporphyrinogen III oxidase [Mycobacterium abscessus ATCC 19977]
 gi|169240720|emb|CAM61748.1| Probable oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium abscessus]
          Length = 388

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 18/380 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWM-RQLTGPRSIS 72
             G+YVH PFC  +C YCDFN++    ++G+      ++++   E++   R L G   + 
Sbjct: 15  PFGIYVHVPFCATRCGYCDFNTYTAD-ELGEGTSPAGWLEALRAELELAARTLAGNPPVE 73

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+    +A +LD I  ++ ++   E+T EANP S     F   R AG  R
Sbjct: 74  TVFVGGGTPSLLGGSGLAEVLDAIGAHFVLAPGAEVTTEANPESTSPAFFDTIRAAGYTR 133

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS     L  L R H    A+AA   AR      ++ DLIY  P +T       +
Sbjct: 134 VSLGMQSAAPHVLATLDRVHAPGRAVAAAREARAAGLGHVNLDLIYGTPGETDDDLRRSI 193

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              L   VDH+S Y L +E+GT   +  + G+L  P E+   D Y L  +  +  GL  Y
Sbjct: 194 AAVLEAGVDHVSAYALVVEEGTALARRVRRGELPNPDEDALADRYQLLDAALTEAGLDWY 253

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G +  HNL YW  GD+ G GPGAH  V    + V     KHP ++ + +   
Sbjct: 254 EVSNWARPGGQCRHNLGYWAGGDWWGAGPGAHGHV----NGVRWWNVKHPNTYARRLLGE 309

Query: 312 GH-AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           G   V   E LS  ++  E +++ +RL  GI++ D  +     +    +R L       R
Sbjct: 310 GQLPVGGHEILSPVERHTEEVLLAVRLNTGIALTDLTIEERGRVPAVVDRGLG------R 363

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
           +   RL  T +G  + D V+
Sbjct: 364 LVDERLVLTDQGRLLADGVV 383


>gi|325068573|ref|ZP_08127246.1| coproporphyrinogen III oxidase [Actinomyces oris K20]
          Length = 415

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 169/332 (50%), Gaps = 14/332 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGP-----RSI 71
           VY+H P+C  +C YCDFN++     +GQ    E+F+ +   E++  R+         R++
Sbjct: 22  VYLHVPYCRVRCGYCDFNTYTN-LTMGQGASAEDFVGTLAGELRAARRAMDEAGLPVRAV 80

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTP+++   ++  +L+ + + + ++++ E+T EANP SV+        + G  
Sbjct: 81  QTVFVGGGTPTMLPAADLVSMLELVRECFGLAADAEVTTEANPDSVDEAGLAALAEGGFT 140

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +     +  AR    R S DLIY  P ++   W+  L
Sbjct: 141 RVSFGMQSAVPHVLKVLERTHEPARVPRVVEWARRAGLRTSLDLIYGAPGESAEDWQRSL 200

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   DH+S Y L IE+GT  +   + G+L +P ++     Y +  +     G   Y
Sbjct: 201 DAVTRIGPDHVSAYALVIEEGTRMWGQVRRGELPMPEDDDEATKYEMADAALGQAGYEWY 260

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G+E  HN  YW   D+ G GPGAHS +      V +   KHP +W   +   
Sbjct: 261 EISNWARPGSECRHNQAYWLDWDWWGAGPGAHSHLG----DVRLWNTKHPVAWAGQIATG 316

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              V   E + ++ +  E +M+G+RLREGI +
Sbjct: 317 HLPVAGHEVIDADSRELERIMLGIRLREGIEL 348


>gi|251782642|ref|YP_002996945.1| coproporphyrinogen III oxidase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391272|dbj|BAH81731.1| coproporphyrinogen oxidase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 376

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 200/376 (53%), Gaps = 23/376 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLEALIQEFESY----DIHDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + +N  +    E TIEANP  +  +  +    + VNRISLGVQ+  
Sbjct: 64  TAITADQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLEHSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I+     +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQH----YLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-------RNLQRQGFIERVQF 373
           L  E+  +E L +GLR + G+S++ ++       DI  E       R+LQ QG + +   
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVSIQRFQ----EKFDISFEERYGTIVRDLQDQGLLVKDD- 353

Query: 374 SRLRCTQRGMTMLDSV 389
           + +R T++G+ + DSV
Sbjct: 354 AFVRMTKKGLFLGDSV 369


>gi|300775209|ref|ZP_07085071.1| coproporphyrinogen dehydrogenase [Chryseobacterium gleum ATCC
           35910]
 gi|300505949|gb|EFK37085.1| coproporphyrinogen dehydrogenase [Chryseobacterium gleum ATCC
           35910]
          Length = 374

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 198/380 (52%), Gaps = 13/380 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC+F  H       ++  +++  TE+   +     +++ S++FGGGT
Sbjct: 2   IYIHIPFCKQKCSYCNF--HFSTSLNFKDEMLRAMKTEILLRKDELQNKNLKSLYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++    I+ ++D   + ++   ++EIT+EANP  ++ N  +      VNR+S+G QS 
Sbjct: 60  PSILSVDEISSLIDETLRYFSFEKDIEITLEANPDDLDKNFLKQLAGTPVNRLSIGTQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ + R HNASEA ++I  A++  F  +S DLIY  P   +  W+  L + ++  V
Sbjct: 120 FEEDLKLMNRAHNASEAESSIKRAQDFGFENLSIDLIYGSPTSNLEIWKENLNKTIALEV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T        G +  P E      +         HG   YE+SN +  
Sbjct: 180 PHISSYALTVEPKTALENWIAKGKVKSPKEEEQNKEFYYLSDFLKDHGFEHYEVSNFAKP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSR--VKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           G  S HN +YW+Y +Y+GIGP AHS     V S  VA     + + ++K +     A  E
Sbjct: 240 GFYSRHNSSYWKYQEYLGIGPSAHSYNGFDVRSWNVA-----NNQQYIKKLNDKLLA-KE 293

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEM-LAGRNLD-IECERNLQRQGFIERVQFSR 375
           +E LS E Q +E +M+GLR   G+ ++  +   + R L+  + E   + Q  I  ++   
Sbjct: 294 EEILSMEDQFNEMIMIGLRTIWGVDIESLKTKFSDRLLEHFQTEIKPKMQEGILIIENDH 353

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L+  ++   M D + ++L +
Sbjct: 354 LKIPEKHWFMADGIASDLFI 373


>gi|311064231|ref|YP_003970956.1| coproporphyrinogen oxidase (NAD) [Bifidobacterium bifidum PRL2010]
 gi|310866550|gb|ADP35919.1| HemN Coproporphyrinogen oxidase (NAD) [Bifidobacterium bifidum
           PRL2010]
          Length = 420

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 186/411 (45%), Gaps = 47/411 (11%)

Query: 26  PFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSISSIFF 76
           PFC+++C YCDFN++          + N+    + EM+ +R       +  P  +S++FF
Sbjct: 2   PFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEP-PVSTVFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + G  R+S G
Sbjct: 61  GGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGFTRVSFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   ++ A+ 
Sbjct: 121 MQSAVPHVLKNLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVRTAVD 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  YEISN 
Sbjct: 181 LGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYEISNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--------------GSHRVAISIEK--- 299
           S  G ES HNL YWR  D+ G+GPGAHS                   +  V+ S+     
Sbjct: 241 SRPGYESRHNLGYWRNVDWAGLGPGAHSHYNTVMGSSTDGDAANSDAAGDVSASVTSTSM 300

Query: 300 ------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV---------- 343
                 HP  W   +          E +S  +  +E +M+GLR+REG+ +          
Sbjct: 301 RGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRHIEAV 360

Query: 344 ---KDWEMLAGRNLDIECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVI 390
              +D      R +D  C   L   G I           T+RG  + D+VI
Sbjct: 361 NRAQDAAQGTLRIIDDACLTPLVGDGLITLDPTTGHTVATRRGRLLNDAVI 411


>gi|168179393|ref|ZP_02614057.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum NCTC 2916]
 gi|182669638|gb|EDT81614.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum NCTC 2916]
          Length = 380

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L   +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLTVVDL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNNLNQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|153936410|ref|YP_001388691.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. Hall]
 gi|152932324|gb|ABS37823.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A str. Hall]
          Length = 380

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGAFTEKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L   +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLTVVGL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNNLTQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|296393790|ref|YP_003658674.1| oxygen-independent coproporphyrinogen III oxidase [Segniliparus
           rotundus DSM 44985]
 gi|296180937|gb|ADG97843.1| oxygen-independent coproporphyrinogen III oxidase [Segniliparus
           rotundus DSM 44985]
          Length = 405

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 188/394 (47%), Gaps = 19/394 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-------W 61
           +++T       GVYVH PFC  +C YCDFN++      G+    + F    Q        
Sbjct: 19  DSLTPSQGAPFGVYVHVPFCASRCGYCDFNTYTPSELGGRSGTAEWFTAVEQELDLAAKA 78

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  L  P  +S++F GGGTPSL+    +A +L  +++ + ++ + E T EANP S     
Sbjct: 79  LSHLGEPPPVSTLFVGGGTPSLLGAAGLARVLSAVSRRFPLAGSFEATCEANPESTSPAF 138

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
           F+G R AG  R+SLG+QS     L  L R H    A  A   AR   F  ++ DLIY  P
Sbjct: 139 FEGIRAAGYTRVSLGMQSAAAHVLAALDRAHTPGRAPQAAAEARAAGFEHVNLDLIYGTP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++       L    +  VDH+S Y LT+  GT   +    G L  P ++V  + +++  
Sbjct: 199 GESEADLASSLAAVAAAPVDHVSAYALTVHAGTALGRAVAKGQLAAPDDDVLAERHDVVD 258

Query: 241 SITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
               A G   YE+SN +    A   HN+ YW+ GD+ G GPGAHS V    + V     K
Sbjct: 259 KALRAAGFDWYEVSNWAKGPQARCWHNMGYWQGGDWWGAGPGAHSHV----NGVRWWNVK 314

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP     ++      V   E L+++++  E +M+GLRLREG+     E    R+ +++C 
Sbjct: 315 HPARHAALIASGEPPVAGYETLTAQERHTEDVMLGLRLREGL-----ERTVLRSSELDCA 369

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             L  +G +   Q  R+        + D + A L
Sbjct: 370 ERLIAEGLLVDRQ-GRIALAPSARMLADGLSATL 402


>gi|219670312|ref|YP_002460747.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfitobacterium hafniense DCB-2]
 gi|219540572|gb|ACL22311.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfitobacterium hafniense DCB-2]
          Length = 375

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 10/337 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFCV+KC YC F S   + +   E+++ S   E+  +RQ      I ++F GGGT
Sbjct: 4   LYIHVPFCVQKCNYCAFYSEPWQ-RAKAEDYLASLNREV-VLRQHEISEEIETLFIGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +L  I          E T EANP ++     Q     G+NRISLGVQS 
Sbjct: 62  PTALPEAELDALLSIIHGKLRFKDGAEKTTEANPGTLTAEKLQILHTQGINRISLGVQSF 121

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L+ +GR H A E    + L R   F  ++ DL++ LP QT   W   L+ AL    
Sbjct: 122 NDDLLKRIGRIHQAEEVADGVRLIREAGFKNLNLDLMFGLPGQTQANWRDTLEEALRIRP 181

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS+Y L +E+GT    ++ +    LP ++   ++Y++ + I    G   YE+SN++  
Sbjct: 182 EHLSVYGLMVEEGTPM-ALNSEAITNLPDDDSQAEMYHVAREILGQAGYRHYEVSNYALP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV--VE 317
           G E  HNL YWR  +Y+GIGP A S +    ++    I     ++  M+ +    V   E
Sbjct: 241 GYECRHNLGYWRRQEYLGIGPSAVSCLNNHRYQNVEDI----NAYETMLSQGKLPVDPQE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            EFLS  +Q  E LM+GLRL++G+++  ++   G +L
Sbjct: 297 DEFLSKHEQMAELLMLGLRLKDGVNLLQFKKEVGADL 333


>gi|257452085|ref|ZP_05617384.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058634|ref|ZP_07923119.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684310|gb|EFS21145.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 365

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 190/372 (51%), Gaps = 22/372 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC+ KC YCDF S       G+ N+ + +L  +     L       +I+FGGG
Sbjct: 11  AVYIHIPFCLHKCEYCDFTSFS-----GKLNWKKRYLEALYQEISLYEHSYYDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + IA IL+ +  +       EIT+E NP ++ +   Q Y + GVNR+S+G+QS
Sbjct: 66  TPSLLEGKEIAKILELLPHD----EKTEITVECNPKTLNLKKLQDYFEIGVNRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + E+ L+ LGR H   EA     +AR I F  +S D+++ALP QT+ + E +++  L   
Sbjct: 122 MNEKYLKMLGRLHTVQEAKEVFQMAREIGFQNISVDMMFALPTQTLEEVEEDIENFLCLD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L  E+ T F++  + G       +V  ++Y         +    YEISN + 
Sbjct: 182 ADHISIYSLIWEENTPFFQKLEKGIYQRTENDVEAEMYQKIIETMKENSYEHYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+  +Y+GIG GA   ++     +  S ++  E +   V KN     E+
Sbjct: 242 SGYSSRHNQKYWQNQNYLGIGLGASGYLE----EIRYSNDRDFEHYFSNVNKNRFPREEE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+ E +     ++G R      +  W   +G+   I CE   ++   I+R +    + 
Sbjct: 298 EILNGEMKEQYRYLLGFR-----QLNTWLTPSGKYKKI-CETLFKKSYLIKREE--EYQI 349

Query: 379 TQRGMTMLDSVI 390
           TQ+G+   + ++
Sbjct: 350 TQKGLFFFNDML 361


>gi|219850400|ref|YP_002464833.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
 gi|219544659|gb|ACL26397.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
          Length = 393

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 199/398 (50%), Gaps = 34/398 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSIS------- 72
           +Y+H PFC ++C YCDFN++    + +    ++ +  TE+  +R+   P   S       
Sbjct: 4   LYIHIPFCHRRCSYCDFNTYANMEHHIAA--YVDALCTELAMLRESLPPLPKSPAAAALR 61

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGV 130
            SIFFGGGTPS++ P  I  IL   A    + +  EI++EANP +V   ++ +  R  GV
Sbjct: 62  PSIFFGGGTPSMLTPAQIERILIAAAALVPLET-AEISLEANPGTVLGRDYLRDIRSLGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQSL + +LR LGR H A+EA A+   AR + F  ++ D I+ LP Q +  W+ 
Sbjct: 121 NRLSMGVQSLHDPTLRILGRIHTAAEARASYLDARAVGFESINLDFIFGLPGQDLADWQA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   +++ VDHL+LY L +E+ T  Y     G + +P +++   +Y L   +    G  
Sbjct: 181 TLTEVIAWDVDHLALYSLILEENTPLYAQVTAGRVQIPDDDLTAAMYELAMDLLDKAGYR 240

Query: 250 AYEISNHSFLGAESL----------HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            YEISN      +            HNL YW   DY+  G GAH  +    +    SI  
Sbjct: 241 HYEISNWVRPQPDDRPDAPPRLACHHNLAYWFNSDYLAAGAGAHGHLFPQRYANIRSI-- 298

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-- 357
             + ++  V+     + E   L+    A E +MMGLRL  G+S + +    G +L IE  
Sbjct: 299 --DGYIAAVQAGHRPIAETIPLTPADLAAETMMMGLRLDIGVSFEHFAARVGDDL-IEHY 355

Query: 358 --CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                 L + G I  +   R+  T+RG  + + V A+ 
Sbjct: 356 GTTLHELMQHGLIA-MDDRRVWLTERGRMVGNHVFAHF 392


>gi|290978991|ref|XP_002672218.1| predicted protein [Naegleria gruberi]
 gi|284085793|gb|EFC39474.1| predicted protein [Naegleria gruberi]
          Length = 382

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/351 (37%), Positives = 200/351 (56%), Gaps = 34/351 (9%)

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGV 130
           S+FFGGGTPS + P  +  I+    + +  S    VEI++EANP+S+E    + + +AG+
Sbjct: 33  SVFFGGGTPSTMHPLAMEKIISHGLEMFGKSREDGVEISMEANPTSIEYGKLKDFHRAGI 92

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALP--KQTMTQ 186
           NR+S+GVQS + + L+ LGR H+  +A+ AI +ARN F    +S DL++ L   K   + 
Sbjct: 93  NRVSIGVQSFDSECLKSLGREHSIEDALNAIDIARNTFGEDSISIDLMFGLAQHKNNPSI 152

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSIT 243
           W+  L +ALS  + HLSLYQLTIEKGT F+++    KD    LP+E  +  LY  T    
Sbjct: 153 WKNSLAKALSLNLSHLSLYQLTIEKGTKFHRLFNVEKD----LPNEEESSHLYEFTIEEC 208

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEK--H 300
             HGL  YE+SN +  G E  HN+ YW+   D+IG+GPGAH R+   + R   S  +   
Sbjct: 209 KKHGLEMYEVSNFAKPGKECKHNIMYWKSIHDFIGVGPGAHGRLTNHNTRERFSTIQVMR 268

Query: 301 PESWLKMVRKNGHAV---------VEKEFLSSEQQADEFLMMGLRL-REGISVKDW---- 346
           PE W++ V    + +         +++E L+ EQQ +E  MMGLR+ +EG+S        
Sbjct: 269 PEDWIEQVDNQLNHIHKPSLLFGDIKEEKLTEEQQIEELFMMGLRMPKEGVSESSLRAIN 328

Query: 347 -EMLAGRNLDIECERNLQRQGFIERVQ---FSRLRCTQRGMTMLDSVIANL 393
            E+   + L+    + L+  G+I+ ++     R+  T  G+++LD +IANL
Sbjct: 329 PELSFEKLLNANMIKQLENHGYIKLIKEENDKRIVATMSGISVLDILIANL 379


>gi|23335028|ref|ZP_00120266.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Bifidobacterium longum DJO10A]
 gi|189439444|ref|YP_001954525.1| coproporphyrinogen III oxidase [Bifidobacterium longum DJO10A]
 gi|189427879|gb|ACD98027.1| Coproporphyrinogen III oxidase [Bifidobacterium longum DJO10A]
          Length = 469

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 163/322 (50%), Gaps = 16/322 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q      +  P  +
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIAEP-PV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++  +LD + K W+++ + EIT EANP +V           G  
Sbjct: 63  STVFFGGGTPTILAARDLVAMLDAVRKIWSIAPDAEITTEANPDTVNEYYINELAAGGFT 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +     ++ A     R S DLIY  P +++  W   +
Sbjct: 123 RVSFGMQSAVPHVLKTLDRTHTPANVAVGVNAANKAGLRSSVDLIYGAPGESLDDWRTSV 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  Y
Sbjct: 183 TTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G ES HNL YWR  D+ G+GPGAH      SH  A++   HP+S        
Sbjct: 243 EVSNWARPGYESQHNLGYWRNVDWAGLGPGAH------SHYNAVTEADHPQSASLTAPAG 296

Query: 312 GHAVVEKEFLSSEQQADEFLMM 333
           G         S++ QA+  L M
Sbjct: 297 GSKSEAIASASADGQANAELGM 318



 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI-------SVKDWEMLAG- 351
           HP  W   + +N     + E ++ E+  +E +M+GLRL EG+       ++ D  M +  
Sbjct: 359 HPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHEGLDLDRINRAINDAGMSSTP 418

Query: 352 ---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              RN+ ++    +  +G I      R+  T+RG  + DSVI
Sbjct: 419 QTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLLNDSVI 460


>gi|323127457|gb|ADX24754.1| coproporphyrinogen III oxidase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 376

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 201/376 (53%), Gaps = 23/376 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLEALIQEFESY----DIHDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + +N  +    E TIEANP  +  +  +  + + VNRISLGVQ+  
Sbjct: 64  TAITAAQLEYLLSHLERNLNLGYLEEFTIEANPGDLTPDKIEVLKHSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I+     +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQH----YLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-------RNLQRQGFIERVQF 373
           L  E+  +E L +GLR + G+S++ ++       DI  E       R+LQ QG + +   
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVSIQRFQ----EKFDISFEERYGTIVRDLQDQGLLVKDD- 353

Query: 374 SRLRCTQRGMTMLDSV 389
           + +R T++G+ + DSV
Sbjct: 354 AFVRMTKKGLFLGDSV 369


>gi|317475602|ref|ZP_07934863.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908172|gb|EFV29865.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 377

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 195/378 (51%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  +I +   E+Q  ++      + +++FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTR--SELKSRYIHALCKELQMRKEYLRGEPVETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   + + I K + +    EIT+EANP  +        ++   NRIS+G+Q+
Sbjct: 61  TPSQLAEEDFREVFETIRKYYGMEHCREITLEANPDDLTEEYTAMLQQLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R H+A +A+ A+H  R   F  +S DLIY LP +T  +W+ +LQ+A+S  
Sbjct: 121 FDDATLKLLNRRHDAEQAVKAVHHCRRAGFNNISIDLIYGLPGETDERWKRDLQQAVSLG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT E+GT  Y++ +   +    E  +V  ++         G   YEISN   
Sbjct: 181 VEHISAYHLTYEEGTRIYELLQAHRIHEVDEESSVRFFSTLMDTLDNAGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YWR   Y+G GP AHS           S+E +  S     R+      E 
Sbjct: 241 PGMYSRHNTSYWRGIPYLGCGPSAHSFNGDSREWNISSLEDYIHSIENNCRR-----FEN 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-ERNLQR--QGFIERVQFSR 375
           E L+   + +E +M  +R R G+ +   E   GR L   C +  L     G +E ++ + 
Sbjct: 296 EHLNRSTRYNECIMTSIRTRWGVPMDIMEQRFGRELWQYCMDMALPHLNDGKLE-IRDNH 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T++G+ + D ++++L
Sbjct: 355 LCLTRKGIFVSDGIMSDL 372


>gi|315604665|ref|ZP_07879728.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313677|gb|EFU61731.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 430

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 174/354 (49%), Gaps = 27/354 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTG-----PRSI 71
           L +YVH PFC  +C YCDFN++   +  G +  ++  S L E +   ++        R  
Sbjct: 30  LSLYVHVPFCRVRCGYCDFNTYTVGFGPGAQVGDYAPSVLAEARLATRVMADAGMKARRA 89

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTP+++    +  IL G+ +   ++ + E+T+EANP SV  +  +    AG  
Sbjct: 90  QTVFFGGGTPTMLATAELIEILRGLDEAVGIAKDAEVTLEANPDSVTRSGLRELAHAGFT 149

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     LR L R H  +     +  A+      S DLIY  P + +T WE  L
Sbjct: 150 RVSFGMQSAVPSVLRTLDRTHAPNRVPLVVEWAKEAGLSTSLDLIYGTPGEGLTDWETSL 209

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + ALSY  DH+S Y L +E+GT   +    G+L  P  +     Y L   +    G   Y
Sbjct: 210 RCALSYRPDHISAYALVVEEGTKMGRQVARGELPTPDPDDEAAKYELADELLGEAGYAWY 269

Query: 252 EISNH---------------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           EISN                S++ A S HNL YWR  D+ G+GPGAHS V     R    
Sbjct: 270 EISNFARVTEGDRSPVRAPTSYVHA-SRHNLAYWRDWDWWGLGPGAHSHVG----RARWW 324

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             K+P ++   VR+        E LS E +  E +M+G+R  EGI++    ++A
Sbjct: 325 NVKNPAAYAARVREGVSPAFAGEILSDETRELERVMLGVRTAEGIALDSLPVVA 378


>gi|241888791|ref|ZP_04776097.1| putative oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans ATCC 10379]
 gi|241864467|gb|EER68843.1| putative oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans ATCC 10379]
          Length = 377

 Score =  192 bits (488), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 208/380 (54%), Gaps = 18/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           GVY+H PFC   C YCDFN  +++R  V  + +I   + E++ M  +   +++ +I+ GG
Sbjct: 7   GVYIHIPFCKYICSYCDFNKFYIQRQPV--DKYIDCLIKEIESMENI---QNVETIYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  +L  + +N       E T EANP  +  +     +  GV+RIS+GVQ
Sbjct: 62  GTPSALSDEQLHRLLTAL-RNKIPQQLREFTFEANPEDLVDSRVALVKGYGVDRISMGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   + L+ LGR H A +   AI +  ++    ++ DL+++LPKQTM      +++   Y
Sbjct: 121 TFNNELLKILGRGHVADDVDMAIANCKKHGIEDINVDLMFSLPKQTMDDLYDSMKKVAEY 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E+ T  Y   +D  + LPS      +YN   +  + +G   YEISN +
Sbjct: 181 NISHISCYSLILEQKTKLYNQVRDKKVTLPSNETEEKMYNEVINFLTENGYEQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN +YW+  +Y G+G GAH  +    +    +++ + +S L    + GHA  E
Sbjct: 241 RPGHESVHNSSYWKNIEYYGLGAGAHGYIDGVRYANQGALKFYIDSML----EKGHARRE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQF 373
           +  ++ +++ +E + +GLRL EG+ +  +E   G+  +       ++NL R+G++E ++ 
Sbjct: 297 ENTVTPKERIEEEMFLGLRLLEGVDLDIFEEKYGKRAEEIFKGVIDKNL-REGYLE-IEG 354

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           ++LR T++G+   + V +  
Sbjct: 355 NKLRLTRKGLFYGNDVFSEF 374


>gi|333029256|ref|ZP_08457317.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
 gi|332739853|gb|EGJ70335.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
          Length = 376

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 200/379 (52%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S           +I +   E++  +   G   I +I+ GGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTESQLTSP--YINALCKELELRKDYLGNEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  I + I K + +S+  EIT+E NP  +  N     R   +NR+S+G+Q+
Sbjct: 61  TPSQLSHAELEKIFNTIKKYYDISNVQEITMEGNPDDLTPNYLSMLRTLPINRLSIGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ L R H + +AI A+  AR + F  +S DL+Y LP +TM++WE ++QRA+   
Sbjct: 121 FQNSMLKKLNRRHTSDQAIQAVKDAREHGFKNISIDLMYGLPYETMSEWENDIQRAIDLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  EKGTL YK   +G +    E+ ++  +    +I + +G   YEISN + 
Sbjct: 181 VEHISAYHLIYEKGTLLYKKLIEGFIQEVDEDFSLQSFTKLINILTKNGFIHYEISNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR-KNGHAVVE 317
            G  + HN +YW    Y+G GP AHS   +       S+ ++      M++ K  +   E
Sbjct: 241 PGKIAQHNTSYWTGKKYLGCGPSAHSYNGLTRAWNVSSLHQY------MIQIKANNLNQE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFS 374
            E L    Q +++++  LR   G+S++  +   G    N  ++  +     G +E ++ +
Sbjct: 295 VENLDITTQYNDYIITSLRTMWGLSLETLQTKFGETYYNYILKLAKKHINSGNLE-LKNN 353

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L+ T++G+ + D ++++L
Sbjct: 354 NLKLTKKGVFISDGIMSDL 372


>gi|224026723|ref|ZP_03645089.1| hypothetical protein BACCOPRO_03480 [Bacteroides coprophilus DSM
           18228]
 gi|224019959|gb|EEF77957.1| hypothetical protein BACCOPRO_03480 [Bacteroides coprophilus DSM
           18228]
          Length = 376

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 195/379 (51%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S  +  K  +  +IQ+   E++  +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKRRCIYCDFFSTTQADK--RREYIQALCRELEMRKDYLQGEDIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   + + I + + V+   EIT+EANP  +     +   +   NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQLFETIFRIYPVNDQAEITLEANPDDLTPEYLKMLSQQPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E +L+ L R H A +AI A + +R   F  +S DL+Y LP +T   WE +LQ+AL   
Sbjct: 121 FNEHTLKLLHRRHTAQQAIEAFYQSREAGFRNISIDLMYGLPGETAEGWEYDLQQALQLQ 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+ T  + + +   +    E+++V L+         HG   YEISN S 
Sbjct: 181 PEHISAYHLIYEENTALWTLREQHRVEEADEDLSVTLFKQLIHRLKEHGYQHYEISNFSL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA-VVE 317
            G  S HN +YW    Y+G GP AHS           S++K+      +   N HA + E
Sbjct: 241 PGFHSRHNSSYWTGKKYLGCGPSAHSYNGTSRQWNIASLDKY------IAGINNHAPIYE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
            E L    + ++F++  +R   G+S+   +   G  L   C R  +    QG +E +  +
Sbjct: 295 IENLDLYTRYNDFVITTIRTSAGMSLTLLKNTFGDTLYNYCLRMARPHLNQGTLE-ITNN 353

Query: 375 RLRCTQRGMTMLDSVIANL 393
            L+ T+ G+ + D +++++
Sbjct: 354 TLKLTEAGIFISDGIMSDM 372


>gi|32476125|ref|NP_869119.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
 gi|32446669|emb|CAD76505.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
          Length = 389

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 187/375 (49%), Gaps = 7/375 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C YC+F+    R ++ Q+ ++ +   E++ +   +    + +IF GGGT
Sbjct: 15  LYVHVPFCRHRCGYCNFSVIAGRDEL-QDQYLDAVERELKGIDNSSHELPLRTIFLGGGT 73

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +   I+  + ++ + EIT EANP  +        +  GVNRISLGVQS 
Sbjct: 74  PTRLSATRLQRLHRAISNAFPIADDAEITAEANPEDISPECLDALQAIGVNRISLGVQSF 133

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + + LR L R H+ S A++AI  A      +S DLI+  P +++  W+ +L  A + ++ 
Sbjct: 134 DAEKLRCLERGHDESIALSAIESAHRRVGNVSIDLIFGAPNESLATWQNDLSIAAASSIS 193

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT EKGT F+     GDL    E + + +Y   Q   S  G   YEIS+ +   
Sbjct: 194 HVSTYALTFEKGTSFWSRRSRGDLSETDETLELQMYEAAQQQFSIDGWQQYEISSFARGA 253

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
               HNL YW    +  +GPGA +R   G   V     +   ++LK +   G+A  E E 
Sbjct: 254 TRCQHNLAYWAGRGWHAVGPGA-ARFVDGRREVN---HRSTTTYLKRMLAGGNATDETEA 309

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS--RLRC 378
           ++ EQ A E    G+R  +GI +   +     +L+    + L +   +E V      LR 
Sbjct: 310 ITLEQYARELAAFGVRQLDGIDLSTIDNRTSIDLETLLAKTLTKLQSMELVTHENHHLRL 369

Query: 379 TQRGMTMLDSVIANL 393
           T RG+   D+V   L
Sbjct: 370 TCRGILFADTVATAL 384


>gi|319899915|ref|YP_004159643.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
 gi|319414946|gb|ADV42057.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
          Length = 377

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 176/340 (51%), Gaps = 8/340 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S    +   ++ +I +   E+Q  +      ++ +++FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTT--HSELKQRYIHALCQELQNRKDYLKGEAVETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I + I +   + + +EIT+EANP  +        +    NRIS+G+Q+
Sbjct: 61  TPSQLTEEDFIQIFNTIKEICGLENAIEITLEANPDDLTEEYVSMLQTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HN+++A  AI   R   F  +S DLIY LP +T  +W+ +LQ+A+   
Sbjct: 121 FDDPTLKLLNRRHNSAQATTAIERCRQADFHNISIDLIYGLPGETDKRWKHDLQQAVGLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  +V  +         +G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTPIYEMLQTCHIREVDEESSVRFFTTLTETLVENGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YWR   Y+G GP AHS  +        S+  +  S      + GH   E 
Sbjct: 241 PGMYSRHNTSYWRGIPYLGCGPSAHSFNRETREWNVSSLTTYISSI-----EEGHRSYEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           E L    + +E++M GLR + G+S++    + G  L   C
Sbjct: 296 EKLDEAARYNEYIMTGLRTQWGVSLEHLGQVFGNKLLKYC 335


>gi|325847867|ref|ZP_08170089.1| putative coproporphyrinogen dehydrogenase [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480885|gb|EGC83938.1| putative coproporphyrinogen dehydrogenase [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 374

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 200/377 (53%), Gaps = 25/377 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSIF 75
           +G+Y+H PFC KKC YCDF +         E+ I S+   ++    + Q      + SI+
Sbjct: 4   IGIYIHIPFCKKKCFYCDFTAFP-----NLESRIDSYFENLKKEIILYQKNMDVEVDSIY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ ++ + I  I+D + K + +S   E TIEANP+S+ +   + Y+  G+NRISL
Sbjct: 59  IGGGTPTYVDFKYIEEIIDQL-KIFDLSHVKEFTIEANPNSLSLEKLKAYKSLGINRISL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +++ L+ +GR+HN    +  I   R   F  +S D+I  LP       + +L+  
Sbjct: 118 GVQSFDDEVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEII 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                 HLS Y L +EKG+ FY ++K   L L  +++  D+++  ++     GL+ YEIS
Sbjct: 178 KKINPQHLSYYSLILEKGSHFYSIYKKDKLKLMDDDLERDIFSYIENYLKNLGLNRYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAH---SRVKVGSHRVAISIEKHPESWLKMVRKN 311
           N S    ES HN  YW  G Y+  G GA    S V+  + +  +  E        ++ + 
Sbjct: 238 NFSKKDFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVKYE-------NLINEG 290

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              V  +EF+S++++  E+++  LR  EGI +K++E + G +L  +  + ++   ++GF 
Sbjct: 291 KFPVEFREFISNDEREKEYIIFKLREVEGIDLKEFENIFGHSLLEKYSKIIEKFYKEGFF 350

Query: 369 ERVQFSRLRCTQRGMTM 385
           E  Q   L+ T +G  +
Sbjct: 351 EIDQ--SLKFTHKGFDL 365


>gi|116748799|ref|YP_845486.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Syntrophobacter fumaroxidans MPOB]
 gi|116697863|gb|ABK17051.1| coproporphyrinogen III oxidase, anaerobic [Syntrophobacter
           fumaroxidans MPOB]
          Length = 371

 Score =  192 bits (488), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 173/340 (50%), Gaps = 24/340 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIF 75
           G+YVH PFC  KCPYCDF      Y       +  +L  +  ++++ G R       S++
Sbjct: 8   GLYVHIPFCRSKCPYCDF------YSTTSLELLPLWLEAV--VKEIDGYRGRFALFDSLY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL++   +  ++D + + ++ S + EIT+EANP  +     +     GVNRISL
Sbjct: 60  LGGGTPSLVDAARLGALIDHLRRAFSFSDDTEITLEANPDDITPGRLREVLDLGVNRISL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQSL+E  LR L R H A +A  A+ + R+  F  +  DLIY LP QT+  W   L RA
Sbjct: 120 GVQSLDEGELRLLKRRHTALQAEEALAIIRSAGFENVGIDLIYGLPGQTVPGWLKTLDRA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L +  +HLS YQ+T E+GTLF K  K G +    E+V    +  T       G   YEIS
Sbjct: 180 LGFGPEHLSCYQMTYEEGTLFGKKLKKGTMRPLGEDVERAFFLRTSRFLEKRGYLHYEIS 239

Query: 255 NHS----FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           N +    F+   S HN  YWR    +G+GP AHS           S+      + + +  
Sbjct: 240 NFARAPEFV---SRHNRKYWRRVPCLGLGPSAHSFDNDSRWWNVRSV----SDYARRLMS 292

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
               V  +E L+ EQ   E L +GLR  +G+ ++ +   A
Sbjct: 293 GQSPVAGREILTPEQVQLERLSLGLRTSDGVPLETFASCA 332


>gi|94990391|ref|YP_598491.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS10270]
 gi|94543899|gb|ABF33947.1| Coproporphyrinogen oxidase (NAD) [Streptococcus pyogenes MGAS10270]
          Length = 408

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 201/373 (53%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGT
Sbjct: 40  AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFESY----DIHDLKTLYIGGGT 94

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 95  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKITVLQRSAVNRISLGVQTF 154

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 155 NNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDI 214

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 215 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 274

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 275 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 329

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 330 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIARELQNQGLLVKDD-AFV 388

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 389 RMTKKGLFLGDSV 401


>gi|160940360|ref|ZP_02087705.1| hypothetical protein CLOBOL_05250 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436940|gb|EDP14707.1| hypothetical protein CLOBOL_05250 [Clostridium bolteae ATCC
           BAA-613]
          Length = 425

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 194/388 (50%), Gaps = 48/388 (12%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT      L +Y+H PFC +KC YCDF S  R      E + +  + E++          
Sbjct: 1   MTNLQRKPLELYIHVPFCARKCLYCDFLS-FRALASVHEAYTEQLIREIEVQGACCREYQ 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPS++EP  I  I+  + +N+ ++ + EITIE NP ++  N    YR AG+
Sbjct: 60  VKTVFIGGGTPSVMEPCLIRDIMQALNRNFDIAGDAEITIEVNPGTLLQNKLHIYRAAGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS + Q L+ LGR H   E + +   AR   F  ++ DL+ ++P QT+  W+ 
Sbjct: 120 NRLSIGLQSADNQELKDLGRIHTFEEFLKSYQCARMAGFTNVNVDLMSSIPGQTLESWKN 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMH----------KDGDLV-------------- 225
            L++      +H+S Y L +E+GT F+  +          K  D+               
Sbjct: 180 TLKKVTMLKPEHISAYSLIVEEGTPFWDRYGKREGEETGLKTDDVCFLHPRGGGQTEQAP 239

Query: 226 -----------LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD 274
                      LP E+    +Y+ T++  +  G   YEISN++  G E LHN  YWR   
Sbjct: 240 LPRKRAALYPALPDEDTENRIYHFTRTFLAEQGYGRYEISNYAKPGRECLHNTGYWREVP 299

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM--VRKNGHAVV-----EKEFLSSEQQA 327
           Y+G+G GA S +    +    S E+  +++L +    + G + +       E L+ E Q 
Sbjct: 300 YLGLGLGASSCI----NGTRFSNERDLDTYLHLDFSEEGGSSALALLRGPVEELTREAQM 355

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +EF+ +GLR+ +GIS  D+  + G  ++
Sbjct: 356 EEFMFLGLRMTKGISEIDFVSMFGVKIE 383


>gi|323345211|ref|ZP_08085434.1| coproporphyrinogen dehydrogenase [Prevotella oralis ATCC 33269]
 gi|323093325|gb|EFZ35903.1| coproporphyrinogen dehydrogenase [Prevotella oralis ATCC 33269]
          Length = 371

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 192/379 (50%), Gaps = 18/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSIF 75
           G+Y+H PFC  +C YC F      Y   Q  FI  ++     EM+  +     R I +I+
Sbjct: 3   GLYIHIPFCESRCIYCGF------YSTTQSEFIDRYVRAVCKEMELRKDYLPDRRIRTIY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  ++++ I   I K +      E+T+E NP  V  +     R   VNR+SL
Sbjct: 57  FGGGTPSLLSHRHLSTIFHNINKVYDTGCLQEVTLECNPDDVTADFASALRSLPVNRVSL 116

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+  +  LRFL R H + E ++A+  L R     +S DL++    QT+ +W  ++ R 
Sbjct: 117 GAQTFSDDRLRFLNRRHTSLEIVSAVSDLRRAGINNISIDLMFGFSGQTLGEWHTDIDRT 176

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  V+H+S Y L  E+GT  +KM   G +    E  +  +Y +      + G   YEIS
Sbjct: 177 LALEVEHISAYSLMYEEGTRLFKMLSLGKVQETDEEKSRSMYEILIDKLCSAGYEHYEIS 236

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G  S HN +YW+   YIGIG  AHS     S +  I    + E +++ + ++G  
Sbjct: 237 NFAKPGYRSCHNSSYWQAVPYIGIGAAAHS-YDCRSRQWNID---NIELYMQGI-EHGEI 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            +EKE LS E   ++ +   LR  EGI +   +    RN  ++  R     G +E +   
Sbjct: 292 PMEKEILSPETVYNDTITTALRTYEGIDLNK-QHPNFRNYFMKNARKHIASGLLE-INGD 349

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R R T++G+ + D V+++L
Sbjct: 350 RARLTRKGLYVSDMVMSDL 368


>gi|256827197|ref|YP_003151156.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
 gi|256583340|gb|ACU94474.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
          Length = 368

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 174/323 (53%), Gaps = 19/323 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  KC YCDF SHV  +    + ++++ +  ++   +      I +++FGGGT
Sbjct: 8   LYVHVPFCRAKCSYCDFASHVPGHNSEMDAYVEAVVLALRARGRDGLLSDIETVYFGGGT 67

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ + P  +  +L  ++ +  ++  VE TIEANP S+     +     G NR+SLGVQS 
Sbjct: 68  PTFLGPARLTQLLYALSLSMHLTDTVECTIEANPESLTRRMVRDLWALGANRLSLGVQSF 127

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++  L  LGR H+A +A  AI  A + F  +S DLI  +P QT   +   +Q A++  V 
Sbjct: 128 DDTVLGILGRPHSADDARRAIDDAHDRFHNVSIDLICGIPGQTPGSFLSSVQEAIALGVS 187

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S+Y LTIE+GT FY ++  G L    E+   D       I    G + YE+++++ +G
Sbjct: 188 HISIYPLTIEEGTPFYSLYSKGLLAAIDEDEQADAMIDASRILKQAGFYRYEVASYARMG 247

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES-WLKMVRKNGHAVVEKE 319
            E  HN +YW    Y+GIG G            A+S+E++ E  W    R     ++E+ 
Sbjct: 248 YECRHNCSYWTGVPYLGIGSG------------AVSMEQNDEGRW----RSQDGYILER- 290

Query: 320 FLSSEQQADEFLMMGLRLREGIS 342
            L   Q+  E LM+G+RL +GIS
Sbjct: 291 -LDRYQREAEDLMLGMRLTKGIS 312


>gi|257468457|ref|ZP_05632551.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317062720|ref|ZP_07927205.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688396|gb|EFS25231.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 358

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 179/319 (56%), Gaps = 14/319 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KC YCDF S  +  K  ++ ++   L EM+    L      ++++FGGG
Sbjct: 4   GIYIHIPFCLNKCNYCDFLS-FKSDKESRKKYVDYLLKEME----LYPSYKYNTVYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++ ++I  IL+ +     +    E+T+E NP +V+ +     +K G+NR+S+G+QS
Sbjct: 59  TPSLLDLEDIERILEKL----DIEEGAEVTLEVNPKTVDYDKLVQLKKIGINRLSIGIQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ LR LGR H++ E I   + AR   F  +S DL+++LP Q++ + E +L++ LS  
Sbjct: 115 FDEKYLRILGRMHSSEEGIETYYNARKAGFENISLDLMFSLPGQSVEEVENDLKKLLSMK 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L  E+GT+F++  K G L      +  D++          G   YEISN S 
Sbjct: 175 PEHFSIYSLIWEEGTVFFEKLKKGLLRETENEIEADMFEKIIDTAEEAGYIHYEISNFSL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E++HN  YW   +Y+GIG GA   +    ++  +   ++ +S    V+     ++EK
Sbjct: 235 PEKEAVHNTKYWENKEYLGIGLGASGYINDIRYKNQMKFLEYYDSIESRVK----PIMEK 290

Query: 319 EFLSSEQQADEFLMMGLRL 337
           E ++ +++ +   ++G RL
Sbjct: 291 EMVTLKEREEYKYILGFRL 309


>gi|23465421|ref|NP_696024.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           longum NCC2705]
 gi|312132852|ref|YP_004000191.1| hemn [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483588|ref|ZP_07942568.1| radical SAM superfamily protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690964|ref|YP_004220534.1| coproporphyrinogen III oxidase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|23326070|gb|AAN24660.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum NCC2705]
 gi|311773821|gb|ADQ03309.1| HemN [Bifidobacterium longum subsp. longum BBMN68]
 gi|316914963|gb|EFV36405.1| radical SAM superfamily protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455820|dbj|BAJ66442.1| putative coproporphyrinogen III oxidase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 469

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 163/322 (50%), Gaps = 16/322 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q      +  P  +
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIEEP-PV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++  +LD + K W+++ + EIT EANP +V           G  
Sbjct: 63  STVFFGGGTPTILAARDLVAMLDAVRKIWSIAPDAEITTEANPDTVNEYYINELAAGGFT 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +     ++ A     R S DLIY  P +++  W   +
Sbjct: 123 RVSFGMQSAVPHVLKTLDRTHTPANVAVGVNAANKAGLRSSVDLIYGAPGESLDDWRTSV 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  Y
Sbjct: 183 TTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G ES HNL YWR  D+ G+GPGAH      SH  A++   HP+S        
Sbjct: 243 EVSNWARPGYESQHNLGYWRNVDWAGLGPGAH------SHYNAVTEADHPQSASLTAPAG 296

Query: 312 GHAVVEKEFLSSEQQADEFLMM 333
           G         S++ QA+  L M
Sbjct: 297 GSKSEAIASASADGQANAELGM 318



 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI-------SVKDWEMLAG- 351
           HP  W   + +N     + E ++ E+  +E +M+GLRL EG+       ++ D  M +  
Sbjct: 359 HPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHEGLDLDRINRAINDAGMSSTP 418

Query: 352 ---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              RN+ ++    +  +G I      R+  T+RG  + DSVI
Sbjct: 419 QTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLLNDSVI 460


>gi|260892504|ref|YP_003238601.1| oxygen-independent coproporphyrinogen III oxidase [Ammonifex
           degensii KC4]
 gi|260864645|gb|ACX51751.1| oxygen-independent coproporphyrinogen III oxidase [Ammonifex
           degensii KC4]
          Length = 378

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 174/324 (53%), Gaps = 7/324 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
           G+Y+H PFC +KC YCDF S+  R +   E ++     E+ + R++ G R  + +++ GG
Sbjct: 5   GIYLHVPFCRRKCFYCDFVSYPYREEAALE-YLTGLKREILFWREVYGSRLKVPTLYLGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  I   I ++++  S  E+T+EANP ++     +     GVNR+S+G+Q
Sbjct: 64  GTPTCLPLKLLEEIFSIIYQSFSFLSRAEVTVEANPETLTPELVELLVAWGVNRLSIGMQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +L  + L+ LGR H  +E + ++ + R      ++ DLIY LP QT+  W   L+ A++ 
Sbjct: 124 ALRPEHLKLLGRGHTFAEVVESVKICRRAGLENINLDLIYGLPGQTLADWRETLRAAVAL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y L +E+ TL  K    G+L    E    ++Y          G   YEISN +
Sbjct: 184 EPTHLSAYALELEEHTLLGKRVAKGELSPCEEETVREMYLEAIDFLEGRGYRHYEISNFA 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YWR   Y+G+GP AHS ++      A  +     ++L+++ +    VVE
Sbjct: 244 LPGKECRHNLGYWRLSPYLGLGPAAHSFLEGKRWANAADL----ATYLRLLEEGKRPVVE 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGI 341
              +  ++   E + +GLRLR+G+
Sbjct: 300 VVEVGRKEAMAEAMFLGLRLRQGV 323


>gi|300727903|ref|ZP_07061281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bryantii B14]
 gi|299774745|gb|EFI71359.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bryantii B14]
          Length = 386

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 198/386 (51%), Gaps = 21/386 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFG 77
           G+Y+H PFC  +C YC F S        ++ +  +   EM+  +Q     P  IS+I+FG
Sbjct: 3   GLYIHIPFCASRCIYCGFYSTT--LSQLKQKYTDAICREMELRKQNIDKRPIEISTIYFG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-----VSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
           GGTPS +  + +  I   I   W      +  N EIT E NP  +  +  NF  Y   GV
Sbjct: 61  GGTPSQLSKEQLQQIFSSINSIWNCNGSIIRKNCEITFECNPDDITEDFANFIAY--LGV 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G Q+ +   L+FL R HNA+E   A+   ++  F  +S DL++  P +T+T+WE 
Sbjct: 119 NRVSMGAQTFDPARLKFLHRRHNANEVKLAVDRLKSAGFDNISIDLMFGFPGETLTEWEE 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +++ A+S    H+S Y L  E+GT  Y+M + G++    E  ++ +Y     + +  G  
Sbjct: 179 DIKTAVSLEPKHISAYSLMYEEGTPLYRMLEKGEIEEIDEETSLAMYKKLIDLLTQAGYE 238

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G  S HN +YW    YIGIG  AHS  K        +I ++ +S      
Sbjct: 239 HYEISNFARPGFRSQHNSSYWNAIPYIGIGAAAHSYSKDYRSWNVDNIHQYIQSI----- 293

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            +     E E+L +  + ++ +   LR REGI++   +   G  L +   +  Q+   + 
Sbjct: 294 HDNKLPSESEYLDATTRYNDLITTALRTREGINLTKLKDEYGEELFLYLTQEAQKYINLH 353

Query: 370 --RVQFSRLRCTQRGMTMLDSVIANL 393
             +++ ++L  T++G+ + DS++++L
Sbjct: 354 EMKIEDNKLSLTRKGLYISDSIMSDL 379


>gi|120434442|ref|YP_860148.1| oxygen-independent coproporphyrinogen III oxidase [Gramella
           forsetii KT0803]
 gi|117576592|emb|CAL65061.1| oxygen-independent coproporphyrinogen III oxidase [Gramella
           forsetii KT0803]
          Length = 374

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 194/377 (51%), Gaps = 12/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   ++    E++  +   G ++I +++FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSTKKKSELVEMLCKELELRKDEIG-QTIQTVYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + +  I   I + + VS + EIT+EANP  +     +   K+ VNR+S+GVQS
Sbjct: 60  TPSLLNSEELDSIFKTIFEYYEVSKDAEITLEANPDDLSEEVIKVLDKSPVNRLSIGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                L+ + R HNA EA+A++ LAR  F  +S DLIY +P Q+  QW+  L+ AL   +
Sbjct: 120 FFGADLKLMNRAHNAQEALASLQLARRYFDNISIDLIYGIPGQSNEQWKENLKIALELDI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  + G +   ++    + +++  +  +++G   YE SN+   
Sbjct: 180 PHISSYALTVEPKTALEKFIEKGKVKPVNDEQYREQFDILVNALTSNGFEHYEFSNYGKP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N+ YW    Y+GIGP AHS     S +  IS   +   ++K + ++     + E
Sbjct: 240 GYHSQNNMAYWLGKSYLGIGPSAHS-YDGSSRKWNIS---NNALYIKSLEQD-KIPQQTE 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRL 376
            LS     +EF+M  LR + G+   D +   G   R   ++      + G I++ + +  
Sbjct: 295 KLSVTDSYNEFVMTRLRTKFGVCASDIQEKFGEKYRGHFLKESEKFLKDGLIKKTE-NTF 353

Query: 377 RCTQRGMTMLDSVIANL 393
             T  G  + D + A L
Sbjct: 354 HITSEGKFLSDGIAAEL 370


>gi|148989532|ref|ZP_01820891.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925075|gb|EDK76156.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP6-BS73]
          Length = 351

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 186/337 (55%), Gaps = 15/337 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       +++++  L E +          +S+++ GGGT
Sbjct: 8   AYVHIPFCTQICYYCDF-SKVFIKNQPVDSYLEHLLEEFRSY----DIEKLSTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 123 DDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTMEQVKENVAKAIGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A + 
Sbjct: 241 KPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLSAVEE-GNACIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           ++ LS ++Q +E + +GLR + G+S+  +E   G++ 
Sbjct: 296 EDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSF 332


>gi|300866348|ref|ZP_07111049.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
 gi|300335653|emb|CBN56209.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
          Length = 436

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 182/345 (52%), Gaps = 16/345 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTG--PR 69
            Y+H PFC ++C YCDF   V     G  N          IQ ++T +     L+    +
Sbjct: 26  AYLHIPFCRRRCFYCDFPVSVVGDAYGGRNPRKNSEDSGTIQEYVTVLCREIALSAGFCQ 85

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+ ++FFGGGTPSL+    ++ IL+ + + + +++  EI++E +P +  +   QGY+ AG
Sbjct: 86  SLQTVFFGGGTPSLLSVSQLSRILEALDRQFGIAAEAEISMEIDPGTFSLEQLQGYKAAG 145

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+SLGVQ+ +++ LR  GR+H  ++   A+ L +       S DLI  LP Q++ QW+
Sbjct: 146 VNRVSLGVQAFQDELLRVCGRSHCVADIYEAVDLVQKAEITNFSLDLISGLPHQSLEQWQ 205

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           + L  A++ A  HLS Y L +E  T F +  + G   LP++  A  +Y L Q I +  G 
Sbjct: 206 LSLAAAVAIAPAHLSCYDLVLEPVTAFGRYFQSGIEPLPADETAAQMYRLAQQILTEAGY 265

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN++  G +  HN  YW    Y G G GA S ++     V ++  +  + + + V
Sbjct: 266 EHYEISNYARPGYQCRHNRVYWENRPYYGFGMGAASYLQ----GVRLTRSRTRKEYYQWV 321

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             +    V    ++S     E +M+GLRL +G+S++      G N
Sbjct: 322 EDSTSVKVAATPMTSHDVLLETVMLGLRLAQGVSLEAIAQKFGEN 366


>gi|193214490|ref|YP_001995689.1| oxygen-independent coproporphyrinogen III oxidase [Chloroherpeton
           thalassium ATCC 35110]
 gi|193087967|gb|ACF13242.1| oxygen-independent coproporphyrinogen III oxidase [Chloroherpeton
           thalassium ATCC 35110]
          Length = 376

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 190/379 (50%), Gaps = 9/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC ++C YCDF        +G+  F+     E+     L    +I +I+FGGG
Sbjct: 3   GLYFHIPFCRRRCHYCDFYFTTNASLIGR--FLVGLEAEIFHKATLFENETIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  +L     ++ ++   EIT+EANP  +     Q    + VNR+SLG+QS
Sbjct: 61  TPSLLSLAQIERVLALCFAHFRIAPAPEITLEANPEDLNEEKLQALASSPVNRLSLGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +   L+ L R H+A E+     LAR  F  ++ DL++  P +++  W+ EL+ AL +  
Sbjct: 121 FDAGKLKRLSRGHSAQESFEIASLARTFFRNINIDLMFGTPDESLNDWQRELETALQFQP 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y LT+E  TL       G +  P+E++ V+++          G   YE+SN +  
Sbjct: 181 EHLSTYSLTVEPKTLLAHDIGLGKIPAPNESLQVEMFLSVMRRLREAGYRHYEVSNFAKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            A S HN + W+   Y+G GP AHS V+ G      +  ++ +++L+      +A++ +E
Sbjct: 241 AALSAHNFDAWQRKPYLGFGPAAHSFVRQGRTERRFANVRNLKTYLE---NPANALLFEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRL 376
            L+ +   +E + + LR   G+ +   E           E+ ++    QG + R    RL
Sbjct: 298 TLTEKDILNEEIFLALRQDTGLGMDVLEKRRKFTRSNLLEKEIEAFCLQGLLRRDS-GRL 356

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R T +G T+ DS+     V
Sbjct: 357 RLTDKGFTLADSIAETFMV 375


>gi|309811036|ref|ZP_07704834.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dermacoccus sp. Ellin185]
 gi|308435000|gb|EFP58834.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dermacoccus sp. Ellin185]
          Length = 410

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 196/392 (50%), Gaps = 30/392 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWM-RQL----TGP 68
            G+YVH PFCV +C YCDFN++    ++G+       +  + L E+    R+L    +G 
Sbjct: 29  FGLYVHVPFCVTRCGYCDFNTYTL-TELGEPGASVSTYADAALRELDLAARELGEAPSGV 87

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             I ++F GGGTP+++   ++  IL    + + ++   E+T EANP SV+    +     
Sbjct: 88  PVIETVFIGGGTPTMLPADDLVRILAKARELFGLAEGCEVTTEANPDSVDETYLRTLADG 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G  R+S+G+QS     L  L R HN +    A+  A+++  ++S DLIY  P +++  W 
Sbjct: 148 GFTRVSIGMQSAVPHVLATLERTHNPANVERAVRAAKDVGLQVSIDLIYGAPGESLDDWR 207

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  A++   DH+S Y L +E+GT      + G+L LP ++   D Y L  ++ +  G 
Sbjct: 208 TSLDAAIALEPDHISAYALVVEEGTKMGAQVRRGELPLPDDDDEADKYELADALLADAGY 267

Query: 249 HAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             YE+SN +     +  HNL YWR   + G+GPGAHS V      V     KHP ++ + 
Sbjct: 268 DWYEVSNWARSPQTQCRHNLAYWRDEPWWGVGPGAHSHVG----GVRWWNVKHPRAYAQR 323

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQR 364
           V       +  E L   Q+ +E +++ +RL EG+ +          LD +  R    L  
Sbjct: 324 VNAGLSPALAGELLEERQRYEERVLLQVRLAEGLPLD--------MLDDDGRRAVAGLVA 375

Query: 365 QGFIE---RVQFSRLRCTQRGMTMLDSVIANL 393
            G I+    V+  R+R T RG  + D+V+  L
Sbjct: 376 SGLIDGPSAVRDKRVRLTLRGRLLTDTVVRAL 407


>gi|227545897|ref|ZP_03975946.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|227213691|gb|EEI81537.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           longum subsp. infantis ATCC 55813]
          Length = 469

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 163/322 (50%), Gaps = 16/322 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q      +  P  +
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIEEP-PV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++  +LD + K W+++ + EIT EANP +V           G  
Sbjct: 63  STVFFGGGTPTILAARDLVAMLDAVRKIWSIAPDAEITTEANPDTVNEYYINELAAGGFT 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +     ++ A     R S DLIY  P +++  W   +
Sbjct: 123 RVSFGMQSAVPHVLKTLDRTHTPANVAVGVNAANKAGLRSSVDLIYGAPGESLDDWRTSV 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  Y
Sbjct: 183 TTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G ES HNL YWR  D+ G+GPGAH      SH  A++   HP+S        
Sbjct: 243 EVSNWARPGYESQHNLGYWRNVDWAGLGPGAH------SHYNAVTEADHPQSASLTAPAG 296

Query: 312 GHAVVEKEFLSSEQQADEFLMM 333
           G         S++ QA+  L M
Sbjct: 297 GGKSEAIASASADGQANAELGM 318



 Score = 43.5 bits (101), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI-------SVKDWEMLAG- 351
           HP  W   + +N     + E ++ E+  +E +M+GLRL EG+       ++ D  M +  
Sbjct: 359 HPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHEGLDLDRINRAINDAGMSSTP 418

Query: 352 ---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              RN+ ++    +  +G I      R+  T+RG  + DSVI
Sbjct: 419 QTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLLNDSVI 460


>gi|33240834|ref|NP_875776.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33238363|gb|AAQ00429.1| Oxygen independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 416

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 207/401 (51%), Gaps = 36/401 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLT-GPR--SIS 72
            Y+H PFC ++C YCDF       + G EN      ++S+L  +   R+++  P+  S+S
Sbjct: 7   AYLHIPFCHRRCFYCDFPVVPLGDRAGTENGPGSSSVKSYLNLLH--REISLAPKVASLS 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPS++    +A +LD +  ++   +  EI+ E +P+S +  + +G+  AGVNR
Sbjct: 65  TVYIGGGTPSILSADQVANLLDHLRLHFGFQNGAEISFEVDPASFDTFSLEGFLDAGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQW 187
           +SLG QS +++ L  LGR H A++ + A       F        S DLI  LP Q +  W
Sbjct: 125 LSLGAQSFDDKVLAQLGRRHTANDLLDACGWINQAFNERKLFSWSLDLIQNLPGQDLCSW 184

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E +L +AL  +  H+S+Y L+IEKGT+F      G+L LP+E+ A D+  +T       G
Sbjct: 185 EKQLLKALDISPPHMSIYDLSIEKGTVFEWRQNRGELSLPNEDDASDMSKMTSDKLKQAG 244

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN++  G  S HN  YW    + G G GA S    G         +  + WL++
Sbjct: 245 FSRYEISNYALPGHASRHNRVYWSGSGWWGFGQGATS-CPWGVRSSRPRTREKYKKWLEV 303

Query: 308 VRKNGHAVVEKEF-LSSEQQ---ADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNL 362
              +G   ++K   L++E Q    DE L+ GLR REGI  K  E+++  N D  + E NL
Sbjct: 304 QENDG---LDKSLTLNNEGQLIPLDELLIFGLRRREGIDFK--ELVSSFNWDESQLEINL 358

Query: 363 Q----------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                      ++G I++  +        GM + + ++ ++
Sbjct: 359 NNLKNYWANSLKEGLIKQRGYRFYLTDPHGMDLSNQILVDM 399


>gi|212697099|ref|ZP_03305227.1| hypothetical protein ANHYDRO_01664 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675874|gb|EEB35481.1| hypothetical protein ANHYDRO_01664 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 374

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 200/378 (52%), Gaps = 25/378 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSI 74
            +G+Y+H PFC KKC YCDF +         E+ I S+   ++    + Q      + SI
Sbjct: 3   KIGIYIHIPFCKKKCFYCDFTAFP-----NLESRIDSYFENLKKEIILYQKNMDVEVDSI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ ++ + I  I+D + K + +S   E TIEANP+S+ +   + Y+  G+NRIS
Sbjct: 58  YIGGGTPTYVDFKYIEEIIDQL-KIFDLSHVKEFTIEANPNSLSLEKLKAYKSLGINRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS +++ L+ +GR+HN    +  I   R   F  +S D+I  LP       + +L+ 
Sbjct: 117 LGVQSFDDEVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEI 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  HLS Y L +EKG+ FY ++K   L L  +++  D+++  ++     GL+ YEI
Sbjct: 177 IKKINPQHLSYYSLILEKGSHFYSIYKKDKLKLMDDDLERDIFSYIENYLKNLGLNRYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAH---SRVKVGSHRVAISIEKHPESWLKMVRK 310
           SN S    ES HN  YW  G Y+  G GA    S V+  + +  +  E        ++ +
Sbjct: 237 SNFSKKDFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVKYE-------NLINE 289

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGF 367
               V  +EF+S++++  E+++  LR  EGI +K++E + G +L  +  + ++   ++GF
Sbjct: 290 GKFPVEFREFISNDEREKEYIIFKLREVEGIDLKEFENIFGHSLLEKYGKVIEKFYKEGF 349

Query: 368 IERVQFSRLRCTQRGMTM 385
            E  Q   L+ T +G  +
Sbjct: 350 FEINQ--SLKFTHKGFDL 365


>gi|160944713|ref|ZP_02091940.1| hypothetical protein FAEPRAM212_02227 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443897|gb|EDP20901.1| hypothetical protein FAEPRAM212_02227 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104332|emb|CBL01876.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii SL3/3]
          Length = 360

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 197/383 (51%), Gaps = 32/383 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SLG+Y+H P+C  KC YCDF SH     V  + ++ + L E+        P    +++FG
Sbjct: 2   SLGLYLHIPYCFSKCRYCDFYSHPGERGV-PDAYVDALLRELHRFAP-DAPLRPDTLYFG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P     ++    +        EIT+EANP +V   + +G+R AGVNRIS GV
Sbjct: 60  GGTPSLLTPAQAERLI----RAADPVPGAEITLEANPETVTEESLRGFRAAGVNRISFGV 115

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  LR LGR HNA +A AA   AR   F  +S D++ ALP  T  +++  L+    
Sbjct: 116 QSARDTQLRTLGRPHNAKQARAAFAAARRAGFENISGDIMLALPHYTQAEFDETLELIEK 175

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L IE  + F K   +G   LP+ + A D Y         HG   YEISN 
Sbjct: 176 GGATHISAYLLKIEPDSAFGKHPPEG---LPTSDEAADFYLYAVEQLEHHGYRQYEISNF 232

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW  GDY+G+GP AHS   +G  R   +    P++   +  ++  A +
Sbjct: 233 AKPGYEGKHNLIYWDCGDYLGLGPAAHS--CMGGKRFCYA----PDTAAFL--QDAAAPI 284

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQG---FIER 370
               +     A+++L++ LRLR+G+ ++ ++ L G+      +   +N  R G   F  R
Sbjct: 285 ----MDGSCGAEDYLILQLRLRKGLDLEAYKTLYGKQFSTAQLAFVQNCVRAGYATFDGR 340

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           +    L  T  G+ + +S++A L
Sbjct: 341 I----LALTPAGLIVQNSILAQL 359


>gi|282896778|ref|ZP_06304784.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Raphidiopsis brookii D9]
 gi|281198187|gb|EFA73077.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Raphidiopsis brookii D9]
          Length = 362

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 166/276 (60%), Gaps = 7/276 (2%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + + ++FFGGGTPSL+  + I  IL  + + + +   +EI++E +P + ++ + QGY+ A
Sbjct: 35  QPLKTVFFGGGTPSLLSAKQIEQILSSLEQRFAMEPKIEISMEIDPGTFDLAHIQGYKSA 94

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR+SLGVQ+   + L+  GR+H+  +  AAI +   +  P  S DLI  LP Q++ QW
Sbjct: 95  GVNRVSLGVQTFTPELLKTAGRSHSVEDIFAAIDIVNQVEIPEFSIDLISGLPHQSIEQW 154

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L + +  A  H+S+Y LTIE GT+F + ++ GD  LP++ + V +Y L Q I +  G
Sbjct: 155 QNSLTKGVEIAPTHISIYDLTIETGTVFGRYYQAGDHPLPTDEITVKMYELGQEILTGAG 214

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN++  G +  HN  YW+   Y G G GA S ++         I+++ + WL  
Sbjct: 215 YEHYEISNYAKPGHQCKHNRVYWQNLAYYGFGMGATSYIEGKRFSRPRRIQEYYQ-WL-- 271

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
             KNG A+++ E +  +++  E +M+G+RL EG+++
Sbjct: 272 --KNG-AIIDVEVIYVDEELLETIMLGMRLAEGLNL 304


>gi|288555675|ref|YP_003427610.1| coproporphyrinogen III oxidase [Bacillus pseudofirmus OF4]
 gi|288546835|gb|ADC50718.1| coproporphyrinogen III oxidase [Bacillus pseudofirmus OF4]
          Length = 381

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 186/377 (49%), Gaps = 14/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   E +IQ+ L EM        P  + +I+ GGG
Sbjct: 4   AAYIHIPFCEHICHYCDFNKVFLKNQPVDE-YIQALLHEMHMTINEAKPDQLKTIYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +   +     +    E T+E NP S E       ++ GVNR+S+GVQS
Sbjct: 63  TPTALTAAQLRTLFAEMHSILPMEQIEEFTVEVNPDSSEEEKLAVMKEFGVNRLSIGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L  +GR H++     A+  +R   F  +S DL++ LP Q++ Q+   +++A    
Sbjct: 123 FDQSLLDAIGRTHSSDSVHDAVKRSREAGFDNLSLDLMFGLPHQSVEQFIDTIEKAAELG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+HLS Y L IE+ T+F+   + G L LP E   V +Y   +  T AHG   YEISN + 
Sbjct: 183 VEHLSAYSLKIEEKTVFFNRQRKGKLSLPPEEDEVTMYEELRKRTKAHGFVQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES--WLKMVRKNGHAVV 316
            G ES HNL YW   +Y G G GAH  V    H+    + K+ E+    K+   N H V 
Sbjct: 243 PGRESKHNLVYWNNDEYYGFGAGAHGYVNGVRHQNIGPVPKYIEAVNQKKLPYLNEHKV- 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
                S  +Q +E + MGLR   G+ + +      ++L+    +  ++L  +G +   Q 
Sbjct: 302 -----SRVEQIEEAMFMGLRKLNGVDLDELSKRYDKDLNKLYHDQIKDLSERGLLVSEQ- 355

Query: 374 SRLRCTQRGMTMLDSVI 390
             L+ T  G+ + + V 
Sbjct: 356 GMLKLTNEGLLLANEVF 372


>gi|320449620|ref|YP_004201716.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           scotoductus SA-01]
 gi|320149789|gb|ADW21167.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           scotoductus SA-01]
          Length = 373

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 191/377 (50%), Gaps = 23/377 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   CPYCDF+  VRR     E +++    E Q + ++  P  + +++ GGGT
Sbjct: 4   LYLHVPFCPTLCPYCDFHV-VRRGPGWVEAYLKRLKEEAQRLYEIH-PEPLKTLYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  + +  +   +   W + ++ E+T+EANP ++        +  GVNR+SLGVQS 
Sbjct: 62  PSFLRDRELIALFQALP--WRLEADAEVTLEANPGTLNRERMALLKDLGVNRLSLGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +E  LRFLGR H    A+ A+ +A     R+S DLI  LP Q +   E +L+ A S  V 
Sbjct: 120 QEAVLRFLGRAHGRRGALKAVEMALEGGFRVSLDLILGLPMQEV---EKDLKEAASLGVG 176

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +EKGT F       D     E  A  +    + I    GL  YEISN +  G
Sbjct: 177 HVSAYTLQLEKGTPFALSGLKED----PEREAWAMGK-AEEILEGAGLVRYEISNFARPG 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEKE 319
            E+ HNL YWR G ++ +GP A  +        A      P   WL           ++E
Sbjct: 232 EEARHNLAYWRNGFWLALGPSAAGQYPGTGPVYAFRRTNPPLPRWLL------GEPPQEE 285

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSRL 376
            +S  + A E LM+GLRL+EG+ V+  E   G +L    +    +L   GF+E ++  RL
Sbjct: 286 AISPLEHAKESLMLGLRLKEGVDVEAVERRTGLSLWPSLQPAAISLAEAGFLE-IEGLRL 344

Query: 377 RCTQRGMTMLDSVIANL 393
           + T+R   +L  V+  L
Sbjct: 345 KPTRRAFPLLHPVVLKL 361


>gi|218506865|ref|ZP_03504743.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
          Length = 135

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 106/135 (78%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           VHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++++SIF GGGTPS
Sbjct: 1   VHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLNETAAVRAMSGPKTVTSIFLGGGTPS 60

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L++P+ +A ILD IA++W V + +EIT+EANPSSVE   F+GYR AGVNR+SLGVQ+L +
Sbjct: 61  LMKPETVAAILDSIARHWHVPAGIEITMEANPSSVEAERFRGYRAAGVNRVSLGVQALND 120

Query: 143 QSLRFLGRNHNASEA 157
           + L+FLGR H+ ++A
Sbjct: 121 RDLKFLGRLHDVADA 135


>gi|22298735|ref|NP_681982.1| coproporphyrinogen III oxidase [Thermosynechococcus elongatus BP-1]
 gi|22294916|dbj|BAC08744.1| oxygen independent coprophorphyrinogen III oxidase 2
           [Thermosynechococcus elongatus BP-1]
          Length = 399

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 180/331 (54%), Gaps = 8/331 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSI 74
           ++  Y+H PFC ++C YCDF  + V       ++ IQ ++  +  +     T  + + +I
Sbjct: 2   TIAAYIHLPFCRRRCFYCDFPITVVGESPTLAQSLIQEYVAALCQEIAHTPTEGQPLQTI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P  +  +L+ + +   ++   EI++E +P + ++   Q Y + GVNR+S
Sbjct: 62  FFGGGTPSLVPPPYLGQLLEALDRQLGIALEAEISMEMDPGTFDLEQLQDYLRLGVNRVS 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ +++ LR  GR+H+ ++   A+ +  R      S DLI  LP+Q++  W+  L++
Sbjct: 122 LGVQAFDDELLRLCGRSHDVADVERAVEIIQRAGVANWSMDLISGLPQQSLADWQCSLEQ 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+++   HLS+Y L IE  T+F K ++     LPS+  A   Y+L   + +A G   YEI
Sbjct: 182 AIAFKPTHLSIYDLIIEPKTVFSKRYQPEAAPLPSQEQAAAAYHLAHEMLTAAGYDHYEI 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G    HN  YWR   Y G G GA S ++        +  ++   WL+ + ++ H
Sbjct: 242 SNYAQGGFACRHNQVYWRNQSYYGFGMGATSYLQHRRLSRPRTRREY-YQWLQALPESLH 300

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                       +  E LM+GLRLR+G+S+ 
Sbjct: 301 QGSPDSLWD---RWLETLMLGLRLRDGLSLP 328


>gi|306827443|ref|ZP_07460728.1| coproporphyrinogen III oxidase [Streptococcus pyogenes ATCC 10782]
 gi|304430358|gb|EFM33382.1| coproporphyrinogen III oxidase [Streptococcus pyogenes ATCC 10782]
          Length = 376

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 200/372 (53%), Gaps = 15/372 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLEALIQEFESY----DIHDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + +N  +    E TIEANP  +  +  +  + + VNRISLGVQ+  
Sbjct: 64  TAITAAQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLKHSAVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I+     +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQH----YLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLR 377
           L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +R
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVKDD-AFVR 357

Query: 378 CTQRGMTMLDSV 389
            T++G+ + DSV
Sbjct: 358 MTKKGLFLGDSV 369


>gi|322807281|emb|CBZ04855.1| putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent [Clostridium botulinum H04402 065]
          Length = 380

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 179/337 (53%), Gaps = 10/337 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +IF GG
Sbjct: 10  VSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEIV---NNTKNKIIKTIFIGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+S+G+Q
Sbjct: 66  GTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRLSIGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L   +  
Sbjct: 125 SSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLLTVVGL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YEISN +
Sbjct: 185 SPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYEISNFA 244

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HNL YW   DYIG G GAHS V    +    SI    ++++K +  N    + 
Sbjct: 245 NPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----KTYIKEINSNNLTQIN 300

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               S ++  +EF+ MGLR  +GI + D++   G+N+
Sbjct: 301 FHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNI 337


>gi|326773566|ref|ZP_08232849.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           viscosus C505]
 gi|326636796|gb|EGE37699.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           viscosus C505]
          Length = 415

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 15/353 (4%)

Query: 1   MKYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSF 55
           M  L A        GS     VY+H P+C  +C YCDFN++     +GQ    E+F+ + 
Sbjct: 1   MGELPAQAAASAPDGSERPFSVYLHVPYCRVRCGYCDFNTYTN-LTMGQGASAEDFVGTL 59

Query: 56  LTEMQWMRQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
             E++  R+         R+  ++F GGGTP+++   ++  +L+ + + + ++++ E+T 
Sbjct: 60  AGELRAARRAMDSAGLPVRAAQTVFVGGGTPTMLPATDLVSMLELVRECFGLAADAEVTT 119

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           EANP SV+    +   + G  R+S G+QS     L+ L R H        +  AR     
Sbjct: 120 EANPDSVDEAGLEALAEGGFTRVSFGMQSAVPHVLKVLERTHEPVRVPRVVEWARRAGLS 179

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            S DLIY  P +++  W+  L        DH+S Y L IE+GT  +   + G+L +P ++
Sbjct: 180 TSLDLIYGAPGESLEDWQRSLDAVTRIGPDHVSAYALVIEEGTRMWGQVRRGELPMPEDD 239

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
                Y +  +     G   YEISN +  G+E  HN  YW   D+ G GPGAHS +    
Sbjct: 240 DEATKYEMADAALGQAGYECYEISNWARPGSECRHNQAYWLDWDWWGAGPGAHSHLG--- 296

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
             V +   KHP +W   +      V   E + +E +  E +M+G+RLREG+ +
Sbjct: 297 -DVRLWNTKHPVAWAGQIATGHLPVAGHEVIDAESRELERIMLGIRLREGVEL 348


>gi|126663030|ref|ZP_01734028.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteria bacterium BAL38]
 gi|126624688|gb|EAZ95378.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteria bacterium BAL38]
          Length = 407

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 210/407 (51%), Gaps = 40/407 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PRSIS--- 72
           G+Y+H PFC + C YCDF  H       ++  + +   E++   + T     P SI+   
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTNLKKKDEMVLALAKEIEMRSKNTSITHHPSSITEPI 60

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN---------- 121
            +I+FGGGTPS++E  ++  ++D + KN+ V  N EIT+EANP  +  +           
Sbjct: 61  ETIYFGGGTPSILEISDLKFLIDAVYKNFKVVENPEITVEANPDDLNFDFAQYDKEVDLS 120

Query: 122 --------FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
                   F+  +  GVNR+S+G+QS  E  L+ + R HN  EA   + +A   F  +S 
Sbjct: 121 VRAESRTIFEELQTIGVNRLSIGIQSFFEDDLKLMNRAHNVEEAKKCLEIATQYFDNISI 180

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLIY +P+ +  +W   ++ ALS+ V H+S Y LT+E  T  +   + G +  P++ VA 
Sbjct: 181 DLIYGVPQMSNEKWLQNIETALSFGVPHISSYALTVEPKTALHSFIQKGIIPQPNDEVAQ 240

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
           + +++     S +G   YE+SN       S +N +YW    YIGIGP AHS    G +R 
Sbjct: 241 EHFDILVDKLSENGFIHYELSNFGKENYFSKNNSSYWLGKKYIGIGPSAHSY--DGKNR- 297

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             ++  +   ++K +++N    +E E L+   + +E++M GLR   G+S++  E   G+ 
Sbjct: 298 GWNVSNN-SLYIKSIQEN-KLPIEIETLTKTDRYNEYIMTGLRTIWGVSLERIEKEFGKT 355

Query: 354 -LD--IECERNLQRQGFIERVQFSR----LRCTQRGMTMLDSVIANL 393
            LD  +   +    Q  +E V+ S     L+ T++G  + D + ++L
Sbjct: 356 YLDYLLMQSKKYFDQELLECVKLSEVETILKTTKKGKFLSDGIASDL 402


>gi|315658141|ref|ZP_07911013.1| coproporphyrinogen oxidase [Staphylococcus lugdunensis M23590]
 gi|315496470|gb|EFU84793.1| coproporphyrinogen oxidase [Staphylococcus lugdunensis M23590]
          Length = 373

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 176/323 (54%), Gaps = 12/323 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   ++++ + + EM          +I +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIA-KQPVDDYLDALIKEMHTRLN----PNIETMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  + +  +L  I K +T+S   E T EANP  +     +  +  GVNRIS+GVQ+ +
Sbjct: 62  TALNIKQLEKLLKAINKLFTISG--EYTFEANPDELTFQKVKLLKDYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   A+  A  +    +S DL+Y LP+QT+  ++  ++RALS  ++
Sbjct: 120 PELLTILGRTHNTQDIYQAVDYANKVDISSISLDLMYHLPQQTLDDFKDSIERALSMDIN 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY +++ G L LP+E++  D+Y       +      YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNLYRKGKLKLPNEDLGADMYQYLMHRLNHSKFQQYEISNFAEKG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HN+ YW+  +Y G G GA   V  G     ++   H   ++K V+ +   ++    
Sbjct: 240 HASTHNMTYWKNEEYYGFGAGASGYVN-GKRYTNVNPVNH---YIKAVQADKPPILSFTI 295

Query: 321 LSSEQQADEFLMMGLRLREGISV 343
            + ++Q +E + +GLR+ +G+++
Sbjct: 296 PTIKEQMEEEMFLGLRMNKGVNI 318


>gi|303232086|ref|ZP_07318789.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513192|gb|EFL55231.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 392

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 189/361 (52%), Gaps = 25/361 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISS 73
            +G+Y+H PFC +KC YCDF ++ +  +   + ++ + + EM  M     P+S    + +
Sbjct: 13  DMGIYIHIPFCKQKCIYCDFPAY-QNLEEYYDTYLYALVQEMT-MFGDAYPKSRTKLVDT 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    +  IL+ I   + VS + + TIE+NP  V+    +G  K G +RI
Sbjct: 71  VYLGGGTPTELSLLQLEQILNTIKTTYNVSPDCQFTIESNPGEVDRAYLKGLHKLGFSRI 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+  ++SL  L R+HN  +AI A+  A +  F  ++ DLIY LP QT  +    L 
Sbjct: 131 SFGVQTFNDKSLVSLHRSHNREDAIHAVQWAFKEGFQDINIDLIYGLPNQTTDEINKNLD 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +  ++H+S Y L +E GT  Y +   G + LP E+    +Y++        G   YE
Sbjct: 191 IVSTLPINHISTYGLQVEPGTRLYHLVDKGVISLPDESTEDTMYDMMMQGIQDLGFERYE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS---RVKVGSHRVAISIEKHPESWLKMVR 309
           ISN +   A S HNL YW+Y DY+G G GAHS    V+  ++R  +   +  + +     
Sbjct: 251 ISNFAKDKAYSKHNLKYWQYCDYLGFGAGAHSFFDSVRRANNRNVMPYARKIDCF----- 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW--------EMLAGRNLDIECERN 361
                VV++E + S++  +++  + LR + GI+  D+        E + G  LD   E+N
Sbjct: 306 --EFPVVDEEVIDSKRAREDYCFLSLRTKWGINTVDFANRFNIRLEDIYGSILDNLIEKN 363

Query: 362 L 362
           L
Sbjct: 364 L 364


>gi|291543944|emb|CBL17053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus sp. 18P13]
          Length = 365

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 193/381 (50%), Gaps = 22/381 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S   G+YVH PFC  KCPYCDF S+  R +  +    +       +  +L    S+ +++
Sbjct: 2   STPAGLYVHVPFCAVKCPYCDFYSNPYRRERAEAYAARVAENLAAYPAEL----SVDTVY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS++ P  +  +L    + ++++++ EIT+E NP +        +R  GVNR+S 
Sbjct: 58  FGGGTPSILPPPLLGQMLHAARRRFSLAADTEITLEVNPLTATPAALDAWRGLGVNRLSF 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR H A++ IAA+  A    F  +S DL+   P QT       L   
Sbjct: 118 GMQSAVDAELHRLGRRHTAAQGIAAVDRAAAAGFQNISCDLMLGTPGQTGESLAQSLAVY 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y L+IE GT F          +P  + A  LY         HG   YEIS
Sbjct: 178 AQLPIAHVSAYLLSIEPGTPFDTEAMRSQ--VPDGDAAALLYVQMAECLEQHGFRQYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW+  DYIGIGP AHS       R A+  +   + +L+  R     
Sbjct: 236 NFARPGFESRHNLKYWQCVDYIGIGPAAHS--CFNGRRYAVPSDL--DGFLQAPR----- 286

Query: 315 VVEKEFLSSEQQ--ADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             ++E L+ E+    +E +M+GLRL EGI  +D+       L    E  LQR G +  ++
Sbjct: 287 --QQEILTDEEPYTPEERVMLGLRLAEGIRQQDFSESCWAGLLRRAE-PLQRAGML-WIE 342

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             R+R T++G  + +SVI +L
Sbjct: 343 PDRIRLTRQGFLVSNSVICSL 363


>gi|319400919|gb|EFV89138.1| oxygen-independent coproporphyrinogen III oxidase 1 [Staphylococcus
           epidermidis FRI909]
          Length = 374

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 199/375 (53%), Gaps = 18/375 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC + C YCDFN +    K   + ++ + + EMQ    +   R++ +++ GGGT
Sbjct: 6   AYIHIPFCYRICTYCDFNKYFID-KQPVDEYLDALINEMQ----VDNNRNLETMYVGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +  +L  I + +T+S   E ++EANP  +        ++ GVNRIS+GVQ+ 
Sbjct: 61  PTALNMRQLEKLLKAINQTFTISG--EFSVEANPDELTYEKVVLLKQYGVNRISMGVQTF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA++  +
Sbjct: 119 KPELLKILGRTHKTEDIYNAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAIALDI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN S L
Sbjct: 179 DHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYQFLMDRMKNSSFHQYEISNFSKL 238

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW   +Y G G GA   V  G     ++   H   ++K + +    ++ + 
Sbjct: 239 NHESNHNKVYWLNEEYYGFGAGASGYVN-GVRYTNLNPVNH---YIKAINEGKKPILSET 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI-ERVQFSR 375
             +  ++ +E + +GLR+ +G+S   ++    + +D    E  ++L+ +G I E  +F  
Sbjct: 295 SPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFGETIKDLRCRGLIKEEREFIS 354

Query: 376 LRCTQRGMTMLDSVI 390
           L  T+RG  + + V 
Sbjct: 355 L--TERGKVIGNEVF 367


>gi|289432686|ref|YP_003462559.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. GT]
 gi|288946406|gb|ADC74103.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. GT]
          Length = 378

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 174/336 (51%), Gaps = 8/336 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NSL +Y+H+PFC+KKC YC F S+  + +    +++     E++   +      + S++F
Sbjct: 4   NSLALYMHFPFCLKKCGYCSFISYPDKLE-SVPDYVNCLKKEIKLRAE---GLCLHSLYF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P  +A I+  I     +    EIT EANP ++ +   +     G+NR+SLG
Sbjct: 60  GGGTPSLLSPSQVADIMSSIQTVSHLLPGTEITFEANPGTLSLPYLEQLSGLGINRLSLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  +  L  LGR H+A +A      AR   F  ++ DLIY LP  T+  ++  L   L
Sbjct: 120 IQSFSDAELTMLGRLHDAQQARHIYKQARTAGFDNINLDLIYGLPHSTLLSFKANLSEML 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+SLY LT+E+ T  Y   + G L      +A D Y L + +  + G H YEISN
Sbjct: 180 KLEPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLESAGYHHYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW+   Y+G+G   HS  +       I ++++   W      +  A 
Sbjct: 240 WAKQGYESHHNLTYWQNRPYLGLGVAGHSFFQNWRTANTIDLDEYLLCW---QNNSTQAP 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            E   +    Q  E +++GLRL +G+S +D E   G
Sbjct: 297 SENINVDLANQLAETIILGLRLDKGVSAEDIEARFG 332


>gi|182418423|ref|ZP_02949717.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium butyricum 5521]
 gi|237666446|ref|ZP_04526431.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377805|gb|EDT75349.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium butyricum 5521]
 gi|237657645|gb|EEP55200.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 375

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 203/387 (52%), Gaps = 26/387 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFF 76
           + +Y+H PFC +KC YCDF S+      G+E+ I  ++  +  + +R+ +  + I+SIF 
Sbjct: 4   MSLYIHIPFCKQKCLYCDFPSYA-----GKESLINEYIRALNEEILRKCSKYK-IASIFV 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +   N+  +L  I        ++E TIE NP ++        +   VNRIS+G
Sbjct: 58  GGGTPSYLNEINLESLLKTINL-LDFKDDLEFTIECNPGTLNEEKLVLMKNYNVNRISMG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+  +  L+ +GR H+  E     + AR   F  ++ DL++ LP Q M  W   L+  +
Sbjct: 117 LQTTNDNLLKEIGRIHSFEEFKKNYNQARKAGFENINVDLMFGLPNQHMKDWNASLEDVM 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   DH+S Y L IE+GT FY ++ +  L +P+E     +Y  T+     +G + YEISN
Sbjct: 177 SLEPDHISAYSLIIEEGTCFYNLYNNDKLNIPNEEEERSMYLFTKGFLEDYGYNQYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR----VAISIEKHPESWLKMVRKN 311
           ++ +  E  HN  YW+  +Y+G+G  A S V     +    + I IEK        +  N
Sbjct: 237 YAKVNKECFHNKVYWKCNEYLGLGVSASSFVDEKRFKNIDDIKIYIEK--------INNN 288

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DI--ECERNLQRQGFI 368
                E    +     +EF+ MGLR+ EGI++K ++   G+++ DI  E  +N  ++G +
Sbjct: 289 EDVTEEIHVNNINDDMEEFMFMGLRMIEGINLKTFKKRFGKDVFDIYDEVIKNNIKKGLL 348

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             V   +L  +++G+ + + V+++  +
Sbjct: 349 -VVDSEKLYLSEKGIELSNYVMSDFIL 374


>gi|229086888|ref|ZP_04219047.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-44]
 gi|228696398|gb|EEL49224.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-44]
          Length = 379

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 169/339 (49%), Gaps = 9/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     ++ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVVQ--YLEYLEKEIINTVQKVPFENMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDLIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG H YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYHQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW    Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKEGYESRHNLTYWNNEQYYGFGAGAHSYVN-GERIQNVGPLKQ---YFSKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   ++S+++ +E L +GLR  +G+S   ++   G  +D
Sbjct: 298 DVHEVTSKERMEEELFLGLRKTKGVSKLGFQKKFGVEMD 336


>gi|94988511|ref|YP_596612.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS9429]
 gi|94992336|ref|YP_600435.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS2096]
 gi|94542019|gb|ABF32068.1| oxygen-independent coproporphyrinogen-III oxidase [Streptococcus
           pyogenes MGAS9429]
 gi|94545844|gb|ABF35891.1| Coproporphyrinogen oxidase (NAD) [Streptococcus pyogenes MGAS2096]
          Length = 408

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 201/373 (53%), Gaps = 15/373 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGT
Sbjct: 40  AYVHIPFCTQICYYCDF-SKVFIQNQPVDAYLKALIQEFESY----DIHDLKTLYIGGGT 94

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRISLGVQ+ 
Sbjct: 95  PTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRISLGVQTF 154

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 155 NNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLEQVKENVAKALALDI 214

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  
Sbjct: 215 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKP 274

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E
Sbjct: 275 GFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEE 329

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +   + +
Sbjct: 330 VLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVKDD-AFV 388

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + DSV
Sbjct: 389 RMTKKGLFLGDSV 401


>gi|315187232|gb|EFU20989.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           thermophila DSM 6578]
          Length = 410

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 195/397 (49%), Gaps = 25/397 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           + G+G   + VYVH PFC ++C YCDF S     +   E +++  L  ++ M  L  P  
Sbjct: 14  LEGRGGYPVSVYVHVPFCARRCRYCDFFSVAGAGERVMEGYVERVLEVLEQMFVLLRPSE 73

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAG 129
           I +++ GGGTP+++  +    +L G+ +   V    VE T+E NP  V+    +   + G
Sbjct: 74  IPTVYVGGGTPNVLPLRLWERLLTGVRERVRVWGRPVEWTVEVNPEWVDEEKVRVLGEVG 133

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V R+SLGVQ L+E  LR +GR     E   A+ +      R+S DL+   P+        
Sbjct: 134 VTRVSLGVQGLDEGFLRLMGRGAGRREVERAVEVLAGWGGRVSVDLLAGRPRGMSGDVVR 193

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL+    + V H+S+Y LT+E+GT+   M + G++V+P E      +          G  
Sbjct: 194 ELEEVRGWGVGHVSVYGLTVEEGTVLGAMVRRGEVVMPGEEELAGEWEAICRWFGERGFV 253

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAISIEKHPESWLKM 307
            YE+SN +  G E LHNL YWR   Y+G+GP A S +  K G  RV            + 
Sbjct: 254 RYEVSNFALPGEECLHNLRYWRLEPYLGVGPSAVSTLPGKEGPVRV------------RQ 301

Query: 308 VRKNGHAVVEK------EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IEC 358
           VR  G  V E       E +  +    E+ MMGLR REG+  + +  + G  ++    E 
Sbjct: 302 VRDVGRFVAEGGVWEEVEVIGPQAFLLEWFMMGLRTREGVEGERFRRVWGVGVEEVLGEV 361

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     G  E  + S +R ++ G+ +LDS++ ++A+
Sbjct: 362 GRRWCGWGVAEMGE-SGVRLSEHGLDILDSLLKDIAI 397


>gi|313890049|ref|ZP_07823684.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121410|gb|EFR44514.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 376

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 203/374 (54%), Gaps = 19/374 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++Q+ + E +  +     + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLQALIAEFRSYQ----IKHLKTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  Q +  +L  + ++  +++  E TIEANP  ++       +K+ VNR+SLGVQ+ 
Sbjct: 63  PTAISAQQLDYLLTELTRDLDLANLEEFTIEANPGDLDAEKIAVLQKSAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+HN ++    I  L    F  +S DLIYALP QT+ Q +  + +A++  +
Sbjct: 123 NDKHLKQIGRSHNEAQIYETIDSLKAAGFHNISIDLIYALPGQTLEQVKENVAKAVALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  ++++       AHG   YEISN    
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQEMEAHGFEHYEISNFGKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HNL YW   +Y G G GA   +    +R  + I    + +LK V+  G+A + +E
Sbjct: 243 GYYSQHNLMYWNNDEYYGCGAGASGYLDGMRYRNRVPI----QHYLKAVQA-GNARLTEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQG-FIERVQFSR 375
            L+ E+  +E L +GLR + G+S+  +E            R    L  QG  ++  Q  R
Sbjct: 298 VLTLEEMMEEELFLGLRKKTGVSIAQFEAKFPFTFKERYGRIVEELVAQGLLVDDPQ--R 355

Query: 376 LRCTQRGMTMLDSV 389
           +R T+RG+ + DSV
Sbjct: 356 VRMTRRGLFLGDSV 369


>gi|330995934|ref|ZP_08319829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Paraprevotella xylaniphila YIT 11841]
 gi|329574273|gb|EGG55848.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Paraprevotella xylaniphila YIT 11841]
          Length = 396

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 208/392 (53%), Gaps = 21/392 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSISSIF 75
           G+Y+H PFC  +C YCDF S     K   + +I +   E++    +++Q      I +I+
Sbjct: 3   GIYIHIPFCTSRCVYCDFYSTTCGEK--DKAYISALTNELRLRANYLQQDGQMPVIETIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++   +  I + + + + VS   E+TIEANP  +     +      VNR+S+
Sbjct: 61  IGGGTPSTLDTSLLEPIFEALFQTYNVSDRAEVTIEANPDDLTPRKIKSLHTLPVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ ++  LR L R H+  +AI A+H  ++  F  +S DLIY LP Q++ +WE ++  A
Sbjct: 121 GVQTFDDGKLRLLHRRHSGEQAIRAVHDCQDTGFDNISIDLIYGLPAQSLREWETDVDTA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  V H+S Y L  E+GT  +KM K   +    E +++++++L        G   YEIS
Sbjct: 181 LSLNVQHISAYALIYEEGTPLWKMRKRHVVEEADEELSLEMFSLLMCRLENAGFEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS---RVKVGSH-RVAISIEKHPESWLKMVRK 310
           N +  G  S HN +YW+   Y+G GP AHS   R +  +H  + + I+K  + +      
Sbjct: 241 NFARPGFRSRHNSSYWKGIPYLGCGPSAHSFDGRNRQWNHPDLNVYIDKVGKCF-SSEDF 299

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-------ERNLQ 363
           N    +E+E L+  ++ ++ ++  LR  +G+++ + +   G+ L   C        RN Q
Sbjct: 300 NRAPWIEQEELNLYERYNDCIITSLRTSDGLNLSELKRKFGQPLTDYCLQAAAVHLRNGQ 359

Query: 364 RQGFIERVQFSR--LRCTQRGMTMLDSVIANL 393
            +   ++ Q     L+ T+RG+ + D ++++L
Sbjct: 360 LEIMEKKEQAPEGLLKLTRRGIFLSDGIMSDL 391


>gi|323516492|gb|ADX90873.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 351

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 192/347 (55%), Gaps = 14/347 (4%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ++ ++++ + + +   ++   RSI S+F GGGTPSLI  +  A + + +        + E
Sbjct: 11  EQTYLKALVADFETQVEMAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCE 70

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP ++E + F GY +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR  
Sbjct: 71  ITLEANPGTLEHDPFAGYLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQA 130

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F R++ DL++ LP+QT+ Q   +L+ A+     H+S YQLTIE  T+F++       VL
Sbjct: 131 GFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGATHISWYQLTIEPNTVFFRTQP----VL 186

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P + V  D+    ++   A+G   YE+S        S HNLNYW++GDY+ IG GAH +V
Sbjct: 187 PQDEVLEDIQEQGEAYLKANGFINYEVSAWR-KEQPSAHNLNYWQFGDYLAIGAGAHGKV 245

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       + P+ +L  V    H  ++K  + +++   EF+M  LRL +G+  + +
Sbjct: 246 TRPDGVYRFQKTRLPKDYLAKVPAE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELY 302

Query: 347 EMLAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           E   G +LD   +       R+  +E     RL CT++G   L+SV+
Sbjct: 303 EQRTGLSLDDLNDLLTSLRSRELLVEDS--DRLACTEQGHIFLNSVL 347


>gi|27468188|ref|NP_764825.1| coproporphyrinogen III oxidase [Staphylococcus epidermidis ATCC
           12228]
 gi|27315734|gb|AAO04869.1|AE016748_103 oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           epidermidis ATCC 12228]
 gi|329737145|gb|EGG73399.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU028]
          Length = 374

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 199/379 (52%), Gaps = 18/379 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N    Y+H PFC + C YCDFN +    K   + ++ + ++EMQ    +   R + +++ 
Sbjct: 2   NVKSAYIHIPFCYRICTYCDFNKYFID-KQPVDEYLDALISEMQ----VKNNRDLETMYV 56

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +  + +  +L  I + +T+S   E + EANP  +        ++ GVNRIS+G
Sbjct: 57  GGGTPTALNMRQLEKLLRAINQTFTISG--EFSFEANPDELTYEKVALLKQYGVNRISMG 114

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA+
Sbjct: 115 VQTFKPELLKILGRTHKTEDIYDAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAI 174

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  +DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN
Sbjct: 175 ALDIDHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYRFLMERMKNSPFHQYEISN 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
              L  ES HN  YW   +Y G G GA   V  G     ++   H   ++K + +    +
Sbjct: 235 FGKLNHESNHNKVYWLNEEYYGFGAGASGYVN-GVRYTNLNPVNH---YIKAINEGKKPI 290

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFI-ERV 371
           + +   +  ++ +E + +GLR+ +G+S   ++    + +D   +E  ++L+ +G I E  
Sbjct: 291 LSETSPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFVETIKDLRCRGLIKEEG 350

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +F  L  T+RG  + + V 
Sbjct: 351 EFISL--TERGKVIGNEVF 367


>gi|295394832|ref|ZP_06805047.1| coproporphyrinogen dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972428|gb|EFG48288.1| coproporphyrinogen dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 402

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 174/334 (52%), Gaps = 9/334 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQW-MRQLTGPRSI 71
           S +L  YVH P+C  +C YCDFN++          +E++     +E+   +R L  PR++
Sbjct: 24  SRTLAAYVHVPYCRVRCGYCDFNTYTASELGKGANREDYPDQIASEIDLALRVLGEPRAL 83

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +++FFGGGTP+L+    +  +L  +   + V +  E+T EANP ++ +       ++G  
Sbjct: 84  NTVFFGGGTPTLLPASVLGGVLSQLKSVFGVVTGAEVTTEANPDTLSLEYLSELARSGFT 143

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S+G+QS  +  L  L R H+ +     +   ++   ++S DLIY  P +++  W+  +
Sbjct: 144 RVSVGMQSAVDHVLHTLDRTHDPARIPEVVQWVKDAGLQVSLDLIYGTPGESLDDWKRSV 203

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + AL+   DH+S Y L +E GT      + G+L +P E+   D Y    S  +  GL+ Y
Sbjct: 204 EVALACEPDHISAYSLIVEPGTKMGAQVRRGELPMPDEDDLADKYEWADSAFTTAGLNWY 263

Query: 252 EISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           E+SN S  +     HN++YW   D+ G GPGAHS +      V     KHP +W   +  
Sbjct: 264 EVSNWSRSVDTRCEHNMSYWTGDDWWGFGPGAHSHIG----GVRFWNAKHPRAWADRLAN 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                V +E L +  +  E +++  R+REG+++ 
Sbjct: 320 GQSPAVGREALDAPTREVERILLLARVREGLALD 353


>gi|332522603|ref|ZP_08398855.1| putative coproporphyrinogen dehydrogenase [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332313867|gb|EGJ26852.1| putative coproporphyrinogen dehydrogenase [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 376

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 19/374 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+   ++   V  + ++Q+ + E +          + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFSKVFIKNQPV--DAYLQALIAEFRSYE----ISQLKTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ I  Q +  +L  + ++  V+S  E TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTAINAQQLDYLLTELTRDLDVASLEEFTIEANPGDLDAEKIAVLQASAVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+HN ++    I  L    F  +S DLIYALP QT+ Q +  + +AL+  +
Sbjct: 123 NDKHLKQIGRSHNEAQIYETIDSLKAAGFSNISIDLIYALPGQTLEQVKENVAKALALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLY L +E  T+F    + G L LP+E++  +++        AHG   YEISN    
Sbjct: 183 PHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIIQEMEAHGFEHYEISNFGKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HNL YW    Y G G GA   +    +R  + I+     +LK V++ G+A + +E
Sbjct: 243 GYYSQHNLMYWNNDHYYGCGAGASGYLDGIRYRNRVPIQH----YLKAVQE-GNARLTEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQG-FIERVQFSR 375
            L+ E+  +E L +GLR + G+S+  +E     +      +    L  QG  ++  Q  R
Sbjct: 298 VLTLEEMMEEELFLGLRKKSGVSIAQFEAKFPHSFKERYGQIVEELVAQGLLVDDPQ--R 355

Query: 376 LRCTQRGMTMLDSV 389
           +R T+RG+ + DSV
Sbjct: 356 VRMTKRGLFLGDSV 369


>gi|15277196|dbj|BAB63287.1| ORF1 [Tetragenococcus halophilus]
          Length = 383

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 173/325 (53%), Gaps = 10/325 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           Y+H PFC   C YC+FN   + +  GQ  + +IQ  L E+Q    L    +  +I+ GGG
Sbjct: 11  YIHIPFCEHICFYCNFN---KVFLKGQPVDEYIQGLLKEIQLTLDLHPTDASQTIYIGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L GI +   V +  E TIEANP  +        +  G+NR+S+GVQ+
Sbjct: 68  TPTCLSAKQLDDLLSGITQLLPVETTKEFTIEANPGDLTQEKLNVIKNYGINRLSMGVQT 127

Query: 140 LEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + LR +GR H A +    + L  +N    +S DLIYALP Q++  + + L++A++  
Sbjct: 128 FDNRLLRRIGRKHTAEDVYQTLKLIEKNQIDNLSIDLIYALPAQSIADFLITLEKAIALD 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H ++Y L +E  T+F    + G + LP +     ++ L  +     G   YE+SN + 
Sbjct: 188 LPHYAIYSLILENKTMFMNWVRRGKIELPEQEEEAKMFELAINEMEKAGFSHYEVSNFAK 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA S +    ++    I    + +L ++R N   ++E 
Sbjct: 248 KGWESKHNLVYWNNEHYYGFGAGASSYLNQQRYKNFGPI----QHYLNLLRNNQLPIIET 303

Query: 319 EFLSSEQQADEFLMMGLRLREGISV 343
           E LS + Q +E L +GLR +EG+S+
Sbjct: 304 ENLSFKNQIEEELFLGLRKKEGVSL 328


>gi|25246556|gb|AAN72321.1| coproporphyrinogen III oxidase [Corynebacterium glutamicum]
          Length = 330

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 165/333 (49%), Gaps = 10/333 (3%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           M  L  PR   +IF GGGTPSLI    +A +L  +   + ++   E+T E+NP S     
Sbjct: 1   MASLDNPRQAETIFIGGGTPSLIGADGLARVLGAVRNTFGIADGAEVTTESNPESTSPEF 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
           F G R+AG NRISLG+QS     L+ L R H     +AA   AR   F  ++ D+IY  P
Sbjct: 61  FDGLREAGYNRISLGMQSASSSVLKVLDRTHTPGRPVAAAKEARRAGFEHVNLDMIYGTP 120

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T       L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D + L  
Sbjct: 121 TETDDDVRKTLDAVLEANVDHVSAYSLIVEDGTAMARKVRKGELPAPDEDVYADRFELID 180

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +   + G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS +     R   +I KH
Sbjct: 181 ARLRSAGFDWYEVSNWAKPGGECKHNMGYWVDGDWWGAGPGAHSHI---GDRRFYNI-KH 236

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +   +      + E E L++E    E +M+GLRL++G+ +  +   A   +D    R
Sbjct: 237 PARYSAQIAAGELPIKETEMLTAEDHHTERVMLGLRLKQGVPLNLFTPAARPVID----R 292

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++   G +       L  T  G  + D +IA++
Sbjct: 293 HIA-GGLLHVNALGNLAVTDAGRLLADGIIADI 324


>gi|229543801|ref|ZP_04432860.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           coagulans 36D1]
 gi|229324940|gb|EEN90616.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           coagulans 36D1]
          Length = 377

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C YCDFN  + +   GQ  + +I+  L EM+          +S++F GG
Sbjct: 4   AYIHVPFCEHICYYCDFNKFLLK---GQPVDEYIEMLLEEMRIKTAEAPCEKLSTVFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  +L  I        + E T EANP        +     GVNR+S GVQ
Sbjct: 61  GTPTALNERQLEKLLAAIRTILPYDGDGEFTFEANPGETSEEKLRLLHDYGVNRLSFGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L  +GR H   +    I  AR I F  +S DL++ALP QT+  +   L  ALS 
Sbjct: 121 SFNDRLLEKIGRTHRREDVYRTISHARKIGFSNISMDLMFALPGQTLEDFRETLDEALSM 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L IE  T+FY + + G L LPS++   D+Y++       HGL  YEISN +
Sbjct: 181 GLPHYSSYSLIIEPKTIFYNLLRKGKLRLPSQDAEADMYSMLMDEMEKHGLKQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GAH   K     V +S     + ++ M+R     V+E
Sbjct: 241 TPGYESRHNLVYWNNEEYFGFGAGAHGYEK----GVRLSNYGALKKYIGMLRDGCLPVME 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDW 346
               + +++ +E + +GLR  EG+  + +
Sbjct: 297 THTETKKEKMEEEMFLGLRKNEGVRFRHF 325


>gi|325286717|ref|YP_004262507.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
 gi|324322171|gb|ADY29636.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
          Length = 376

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 198/380 (52%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +E  +Q+   E+   +      S+ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMGKKEEMLQAISKELVLRKNEFKQTSVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    I  ++  + +N+ V  N EIT+EANP  +     +    + VNR+S+GVQS
Sbjct: 61  TPSVLNANEINRLIKKVYENYNVVKNPEITLEANPDDLSTLKIEQLAVSKVNRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L+ + R HNA EA + I LA   F  ++ DLIY +P  +  +W   + +ALS+ +
Sbjct: 121 FFEDDLKLMNRAHNAKEAESCIALATKYFSDITIDLIYGIPGMSNDKWMQNIHKALSFGL 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  K G++    ++VA + + +     +  G   YE SN    
Sbjct: 181 PHISSYALTVEPKTALEKFIKKGEIAPVKDSVAQEHHKILVKELAKEGFVNYEFSNFGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S +N  YW    YIG+GP AHS         + ++  +P+ ++K + +N     E E
Sbjct: 241 DFFSKNNTAYWLGKKYIGVGPSAHS---FNGESRSWNVNNNPK-YIKALAQN-KLPQEIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVK----DWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            LS   + +E++M GLR   G+S++    D+ +     L+ E  + +++ G ++ ++ + 
Sbjct: 296 ELSVVDRYNEYVMTGLRTIWGVSLQKVQEDFGLKYVTYLEKEANKKIEK-GLLQ-LKNNT 353

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L  T +G  + D + A+L +
Sbjct: 354 LLVTAKGKFLSDGIAADLFI 373


>gi|125717905|ref|YP_001035038.1| coproporphyrinogen III oxidase [Streptococcus sanguinis SK36]
 gi|125497822|gb|ABN44488.1| Coproporphyrinogen III oxidase, putative [Streptococcus sanguinis
           SK36]
          Length = 376

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 198/373 (53%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYNAYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I  + E+      K G A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPIRHYLEAV-----KAGDARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAVVSELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|317471382|ref|ZP_07930736.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
 gi|316901133|gb|EFV23093.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
          Length = 272

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/269 (38%), Positives = 154/269 (57%), Gaps = 13/269 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRS 70
           +  L +Y+H PFC KKC YCDF S    +  G +  I S++ +++     W R L  P S
Sbjct: 3   TRELELYLHIPFCKKKCSYCDFCS----FPAGDDE-ISSYIRKLRQEILHWGRLLKRP-S 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S++F GGGTPSLI    I  +++ +  +++ + N+E TIEANP +V       Y+  G+
Sbjct: 57  VSTVFIGGGTPSLIPGAQIESLMNTVRDSFSCAENMECTIEANPGTVTREKLSAYQNCGI 116

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+QS  E+ L+ LGR H   + ++  ++AR+  F  ++ DL+ A+P QTM   E 
Sbjct: 117 NRISFGLQSAREEELKILGRIHTFEDFVSGFYMARDCGFQNINVDLMNAVPMQTMESMEQ 176

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      +HLS+Y L IE+GT FY M K  D +LP+E+    +Y  T+ I    G  
Sbjct: 177 TLLKTAELEPEHLSVYSLIIEEGTPFYDM-KGLDDLLPTEDEDAAMYERTEKILHTLGYE 235

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGI 278
            YE+SN++  G E  HN  YW    Y+GI
Sbjct: 236 RYELSNYARPGYECRHNCGYWTGKPYLGI 264


>gi|258516366|ref|YP_003192588.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257780071|gb|ACV63965.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 432

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 198/400 (49%), Gaps = 34/400 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--------------RRYKVGQENFIQSFLTEMQ---- 60
           +G+Y+H PFC++KC YCDF S+               R   +  E F  S  TE +    
Sbjct: 35  MGLYIHVPFCIRKCLYCDFISYPYENAAAEIYSAALQREINLYAELFRSSSQTENRKKFF 94

Query: 61  ------WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                    +   P   +S+F GGGTP+ +    +++IL  +  +  ++   E T EANP
Sbjct: 95  DALGNYAYDEFAAP-VFTSVFLGGGTPTCLPASLLSVILKTLRHSLPLAPGAEFTAEANP 153

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
            +V   N   +R+ GVNR+SLGVQ+ + Q L+ LGR H   EA+ A+ LAR   F  ++ 
Sbjct: 154 GTVNGENLALFREFGVNRLSLGVQACQPQLLKTLGRIHTFQEALQAVKLARRQGFDNINL 213

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLI+ +P QTM  W+  L++ +     HLSLY L +E+GT   K    G +   +E   +
Sbjct: 214 DLIFGIPGQTMQGWQTCLEQIIDLNPQHLSLYGLQLEEGTPLEKSVTLGHIEPCTEEAEL 273

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
            +Y    +     G   YEISN +       HN+ YW++G+Y+GIGPGAHS +    +++
Sbjct: 274 AMYRYAGTFLKEAGFEQYEISNFARSNKYCRHNILYWQHGEYLGIGPGAHSYL----NKI 329

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGR 352
             S     +++ + +      +   E +S E +  E + + LR+  G+ ++ +    A R
Sbjct: 330 RCSNSGDLKTYAEKLAAGQLPLESSEVISLETEISETIFLALRMLNGLDLEAFARCFAVR 389

Query: 353 NLDIECE--RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             D+     R L   G IE V    LR T+ G+ + + V 
Sbjct: 390 VEDLYSRQIRKLTGLGLIETVN-GFLRLTEEGLPLANIVF 428


>gi|118473719|ref|YP_888797.1| coproporphyrinogen III oxidase [Mycobacterium smegmatis str. MC2
           155]
 gi|118175006|gb|ABK75902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mycobacterium smegmatis str. MC2 155]
          Length = 390

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 165/317 (52%), Gaps = 7/317 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            G+Y+H PFC  +C YCDFN++      G   E ++++   E++   +  G  ++ ++F 
Sbjct: 21  FGIYIHVPFCATRCGYCDFNTYTPSELGGANPEGWLEALRVELRLAAERVGALAVQTVFV 80

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    ++ +LD +  N+ +++  E+T EANP S     F   R AG  RISLG
Sbjct: 81  GGGTPSLLGGDGLSAVLDAVRDNFVLATGAEVTTEANPESTSPELFAALRNAGYTRISLG 140

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS+    L  L R H+   A AA+  A+   F  ++ DLIY  P ++       +  A+
Sbjct: 141 MQSVAPHVLAVLNRTHSPGRAPAAVAEAKAAGFEHVNLDLIYGTPGESDDDLLRSVDAAV 200

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VDH+S Y L +E GT   +  + G++  P ++V    Y L  +  SA G   YE+SN
Sbjct: 201 HAGVDHVSGYALVVEDGTALARRVRRGEIAAPDDDVLAHRYELLDAQLSAAGFAWYEVSN 260

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S  G E LHNL YW  G++ G GPGAH  +       A    KHP ++ + + +    +
Sbjct: 261 WSRPGGECLHNLGYWDGGEWWGAGPGAHGFLNATRWWNA----KHPNAYAQTLAEGALPI 316

Query: 316 VEKEFLSSEQQADEFLM 332
            + E L +  +  E +M
Sbjct: 317 ADFEVLDAADRHTEDVM 333


>gi|327539421|gb|EGF26037.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopirellula
           baltica WH47]
          Length = 373

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 188/373 (50%), Gaps = 7/373 (1%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +H PFC  +C YC+F+    R ++ Q+ ++ +   E++ +   +    + +IF GGGTP+
Sbjct: 1   MHVPFCRHRCGYCNFSVIAGRDEL-QDQYLDAVERELKGIDNSSHELPLRTIFLGGGTPT 59

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +    +  +   I+  + ++ + EIT EANP  +        +  GVNRISLGVQS + 
Sbjct: 60  RLSAARLQRLHRAISNAFPIADDAEITAEANPEDISPECLDALQAIGVNRISLGVQSFDA 119

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + LR L R H+ S A++AI  A      +S DLI+  P +++  W+ +L  A + ++ H+
Sbjct: 120 EKLRCLERGHDESIALSAIESAHRRVGNVSIDLIFGAPNESLATWQNDLSIAAASSISHV 179

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           S Y LT EKGT F+     GDL    E + + +Y   Q   S+ G   YEIS+ +   A 
Sbjct: 180 STYALTFEKGTSFWSRRSRGDLSETDETLELQMYEAAQQQFSSDGWQQYEISSFARGAAR 239

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLS 322
             HNL YW    +  +GPGA +R   G   V     +   ++LK +   G+A  E E ++
Sbjct: 240 CQHNLAYWAGRGWHAVGPGA-ARFVDGRREVN---HRSTTTYLKRMLAGGNATDETEAIT 295

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS--RLRCTQ 380
            EQ A E    G+R  +GI +   +     NL+    + L +   ++ V      L+ T+
Sbjct: 296 LEQYARELAAFGVRQLDGIDLSTIDDRTSINLETLLAKTLTKLQSMKLVTHENHHLKLTR 355

Query: 381 RGMTMLDSVIANL 393
           RG+   D+V   L
Sbjct: 356 RGILFADTVATAL 368


>gi|322389727|ref|ZP_08063274.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           903]
 gi|321143566|gb|EFX38997.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           903]
          Length = 376

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 195/376 (51%), Gaps = 23/376 (6%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           YVH PFC + C YCDF+   ++   V    ++ IQ F  E     ++T  R++   + GG
Sbjct: 9   YVHIPFCTQICFYCDFSKVFIKNQPVDAYLDHLIQEFRRE-----EITNLRTL---YIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    +A +L  + K+  +S   E+TIEANP  ++ +     + + VNR+SLGVQ
Sbjct: 61  GTPTALTADQLAYLLKELTKSLDLSQMEELTIEANPGDLDPDKIAVLKDSPVNRVSLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + + L+ +GR+H   +    I  L    F  +S DLIYALP QTM Q +  + +AL+ 
Sbjct: 121 TFDNRLLKKIGRSHQEQDIYDNIDRLKLAGFDNISIDLIYALPTQTMEQVQENVAKALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++          G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEEMEAEMFEYIIQEMERAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHAVV 316
             G ES HNL YW   +Y G+G GA   V        I  + H P        + G+A V
Sbjct: 241 KPGFESRHNLMYWDNAEYYGLGAGASGYVD------GIRYKNHGPIRHYMQAVEEGNARV 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
           ++E L+  +  +E + +GLR + G+S K +E   G N D +       L +QG +   + 
Sbjct: 295 QEEHLTQTEMMEEEMFLGLRKKTGVSKKRFEEKFGVNFDQQYGSVVEKLIQQGLLVPDK- 353

Query: 374 SRLRCTQRGMTMLDSV 389
             +R T++G+ + D+V
Sbjct: 354 DIVRMTKKGLFLGDTV 369


>gi|72161239|ref|YP_288896.1| coproporphyrinogen III oxidase [Thermobifida fusca YX]
 gi|71914971|gb|AAZ54873.1| coproporphyrinogen III oxidase, anaerobic [Thermobifida fusca YX]
          Length = 410

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 171/342 (50%), Gaps = 16/342 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVG-----QENFIQSFLTEMQWMRQLT 66
           G+   G YVH PFC  +C YCDFN++     R + G        +    + E+   R++ 
Sbjct: 26  GTRPFGFYVHVPFCATRCGYCDFNTYTAAELRSRDGTAVASPRTYADQAIAEIALARRVL 85

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           G R   + ++F GGGTP+L+ P+ +  ILD I   + ++ + EIT EANP +V+      
Sbjct: 86  GDRELPVRTVFMGGGTPTLLSPEELGRILDAIDAQFGLAPDAEITTEANPETVDAGILAR 145

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+AG  RIS G+QS +   L  L R H        +  AR   F  ++ DLIY  P ++
Sbjct: 146 LREAGFTRISFGMQSAKAHVLAVLERTHTPGRPEQCVAWARQAGFAHVNLDLIYGTPGES 205

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W+  L  A++   DH+S Y L +E+GT      + G+L    ++V  D Y +   + 
Sbjct: 206 DADWKESLTAAIAAGPDHISAYSLIVEEGTRLAARVRRGELTPFDDDVLADRYIMADELL 265

Query: 244 SAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           SA GL  YE+SN +    A S HNL YW  G + G+GPGAHS +      V     KHP 
Sbjct: 266 SAAGLQWYEVSNWAADPTARSAHNLLYWTGGHWWGVGPGAHSHIG----GVRWWNVKHPA 321

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++   +         +E LS+  +  E +++ LR+ +G  + 
Sbjct: 322 AYAARLAAGRTPAHAREILSAADRRFERILLELRIAQGCPLD 363


>gi|150002626|ref|YP_001297370.1| coproporphyrinogen III oxidase [Bacteroides vulgatus ATCC 8482]
 gi|294776094|ref|ZP_06741587.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides vulgatus PC510]
 gi|149931050|gb|ABR37748.1| coproporphyrinogen III oxidase [Bacteroides vulgatus ATCC 8482]
 gi|294450045|gb|EFG18552.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides vulgatus PC510]
          Length = 376

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 199/380 (52%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R  +  +  +I++   E+           I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTRSEQ--KTAYIRALCRELTDREAYLEGEHIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V  + EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVIPDAEITLEANPDDLTPEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R H A +AI A    R   F  +S DL+Y LP +T+  W+ +L++AL+  
Sbjct: 121 FQDSTLKLLQRRHTAEQAIRAFQNCRTAGFRNISIDLMYGLPGETLASWKEDLKQALALH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEISNHS 257
            +H+S Y L  E+GT  +++ +   L    E+++V L+  L  S+T+A G   YEISN  
Sbjct: 181 PEHISAYHLIYEEGTTLWQLREQHKLEEADEDLSVSLFGTLIDSLTAA-GYEHYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G GP AHS           S+ +    +++ +  NG+   E
Sbjct: 240 LPGFHSRHNSSYWTEKKYLGCGPSAHSYNGTSRQWNVASLNE----YIRGI-SNGNPTFE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQF 373
            E L    + ++F++  +R + G+ +       G  L   C R    +LQ QG +E ++ 
Sbjct: 295 VEELDLYTRYNDFVITHIRTQWGMPLPKLRKQYGEELYKYCLRMATPHLQ-QGTLE-IKN 352

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L+ T++G+ + D +++++
Sbjct: 353 DTLKLTRKGVFISDGIMSDM 372


>gi|237738363|ref|ZP_04568844.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420243|gb|EEO35290.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 358

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 207/373 (55%), Gaps = 24/373 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KC YCDF S  +  +  ++ ++   L E+     L       +++ GGG
Sbjct: 4   GIYIHIPFCMNKCNYCDFLS-FKSNEEERKKYVDYILKEID----LYPKYEYDTVYLGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +++  I+    K   + +  EIT+E NP +V +   +G++KAG+NR+S+G+Q+
Sbjct: 59  TPSLLNCEDVERII----KKLNIKAGAEITLEVNPKTVNLEKLKGFKKAGINRVSIGIQT 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ L+ LGR HN++E I   + AR   F  +S DL+++LP Q++ + + +L+R L   
Sbjct: 115 FDEKMLQVLGRMHNSNEGIETYYQAREAGFDNISLDLMFSLPNQSIEKVKQDLERLLELR 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L  E+GT F+K  ++        ++   ++       +  G   YEISN   
Sbjct: 175 PEHFSIYSLIWEEGTAFFKKLEEEVYRETDNDLEAQMFEYIIDRATEAGYIHYEISNFCL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E+ HN  YW   +Y+GIG GA   + V  ++  +   K+ ++    + +    ++E+
Sbjct: 235 PSKEARHNSKYWENREYLGIGLGASGYIGVKRYKNQVQFSKYYDN----IERGILPILEE 290

Query: 319 EFLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           E +++E + +   M+G R L +G+      + +G+ L+ +C  +L+ QGF++R   + + 
Sbjct: 291 EIVTAETKEEYKYMLGFRLLNKGV------IPSGKYLE-KC-ISLEEQGFLKRNGEAYI- 341

Query: 378 CTQRGMTMLDSVI 390
            T++G+ + + V+
Sbjct: 342 LTRKGIMLANDVL 354


>gi|254443497|ref|ZP_05056973.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verrucomicrobiae bacterium DG1235]
 gi|198257805|gb|EDY82113.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verrucomicrobiae bacterium DG1235]
          Length = 388

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 12/376 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              LG+Y+H PFC   C +C F   ++  + G  ++I     E++ +    G R + ++F
Sbjct: 14  DGPLGLYLHVPFCSTSCDFCGF-YQIQSDRKGILSYIDGVKRELELVD--AGNRKLDTMF 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP L+ P    L + G   +       E T+E  PSSV+ +  +  ++AGV RIS+
Sbjct: 71  WGGGTPGLL-PAGDMLKVAGAITDALGKPRQEWTVEMAPSSVKRDKLEALKEAGVTRISM 129

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QSL E+ L  LGR H+  + + A  + R++ F  ++ DLI+A+P Q+  +W  +++ A
Sbjct: 130 GIQSLNERLLDALGRQHSLKQIMNAYEMIRDVGFRSVNVDLIFAIPTQSEEEWRADVRGA 189

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DHLS Y LT E+ T  +   + G + + ++  A   Y +     +A G   YEIS
Sbjct: 190 LALEPDHLSTYCLTFEEDTALFIKLQQGKVKIDTDREA-RFYTVMWEEAAAGGFGQYEIS 248

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G   +HN+N WR  ++IG+GP A S+     H     +    + WL  + +    
Sbjct: 249 NYARPGHACVHNMNTWRMAEWIGVGPSAASQWGGSRHTNTPDL----KDWLAGLERGERG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQF 373
           +V++  LS     ++ L+ GLR+ EG+ +   +   GR+L D    R L  +G  ER   
Sbjct: 305 LVDRVELSDGLLLEDSLIFGLRMNEGVDLAALKRRFGRDLEDFPVLRQLVSEGKAER-DG 363

Query: 374 SRLRCTQRGMTMLDSV 389
           + LR T  G  + D+V
Sbjct: 364 TVLRLTSEGRMVADAV 379


>gi|242242858|ref|ZP_04797303.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           W23144]
 gi|242233700|gb|EES36012.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           W23144]
          Length = 374

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 198/375 (52%), Gaps = 18/375 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFC + C YCDFN +    K   + ++ + + EMQ    +   R++ +++ GGGT
Sbjct: 6   AYIHIPFCYRICTYCDFNKYFID-KQPVDEYLDALINEMQ----VDNNRNLETMYVGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +  +L  I + +T+S   E + EANP  +        ++ GVNRIS+GVQ+ 
Sbjct: 61  PTALNMRQLEKLLKAINQTFTISG--EFSFEANPDELTYEKVVLLKQYGVNRISMGVQTF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA++  +
Sbjct: 119 KPELLKILGRTHKTEDIYNAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAIALDI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN S L
Sbjct: 179 DHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYQFLMDRMKNSSFHQYEISNFSKL 238

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW   +Y G G GA   V  G     ++   H   ++K + +    ++ + 
Sbjct: 239 NHESNHNKVYWLNEEYYGFGAGASGYVN-GVRYTNLNPVNH---YIKAINEGKKPILSET 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI-ERVQFSR 375
             +  ++ +E + +GLR+ +G+S   ++    + +D    E  ++L+ +G I E  +F  
Sbjct: 295 SPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFGETIKDLRCRGLIKEEREFIS 354

Query: 376 LRCTQRGMTMLDSVI 390
           L  T+RG  + + V 
Sbjct: 355 L--TERGKVIGNEVF 367


>gi|311748693|ref|ZP_07722478.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Algoriphagus sp. PR1]
 gi|311302818|gb|EAZ81474.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Algoriphagus sp. PR1]
          Length = 373

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 190/380 (50%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H        E+ +     E+   +       + +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTNLKTMEDIVDMIKRELLLRKDYLLSSPVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P+ I  IL+ I   ++     E+T+EANP  +  ++   ++  G++R+SLG+QS
Sbjct: 61  TPSLLQPKMIESILELIQNEYSCEWK-ELTLEANPDDLNPSSLASWKSLGIDRLSLGIQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+F  R H + E+I AI  AR + F + S DLIY  P +  + WE +L RA+   
Sbjct: 120 FNSDVLKFYNRAHTSEESIQAIDKARKMGFEKFSLDLIYGFPYKDHSIWEQDLSRAIQID 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y LTIE  T      K G      E+   D + + QS         YEISN + 
Sbjct: 180 PGHISSYALTIEPKTALGNWEKKGKFSPADEDFIADQFEMLQSRMEDANYIQYEISNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               ++HN NYW+   Y+G+GP AHS    G  R A    +   S++K +++N    V  
Sbjct: 240 EDQYAIHNSNYWKSTPYLGVGPSAHSF--DGKSRGANP--RSNTSYIKSLKENEIPTVH- 294

Query: 319 EFLSSEQQADEFLMMGLRLREGIS---VKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           E LS E   +E+++ GLR   GI    +K+      RN        + ++G++   + + 
Sbjct: 295 ERLSREDNLNEYILTGLRTIWGIDLDRIKNQYQFDLRNQKSSVLNQMNQEGWL-IWKDNH 353

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L  ++ G  + DS+   L +
Sbjct: 354 LSLSKSGKLLADSIAEALFI 373


>gi|325694600|gb|EGD36509.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK150]
          Length = 376

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 205/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  +++      + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDLEKIAVLKDSLVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVFELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|312866636|ref|ZP_07726850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus parasanguinis F0405]
 gi|311097717|gb|EFQ55947.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus parasanguinis F0405]
          Length = 376

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 200/383 (52%), Gaps = 25/383 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSIS 72
           +     YVH PFC + C YCDF+   ++   V    ++ IQ F  E     ++T  R++ 
Sbjct: 3   TKPTSAYVHIPFCTQICFYCDFSKVFIKNQPVDAYLDHLIQEFRRE-----EITNLRTL- 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             + GGGTP+ +    +A +L  + K+  +S   E+TIEANP  ++ +     + + VNR
Sbjct: 57  --YIGGGTPTALTADQLAYLLKELTKSLDLSQMEELTIEANPGDLDPDKIAVLKDSPVNR 114

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ+ + + L+ +GR+H   +    I  L    F  +S DLIYALP QTM Q +  +
Sbjct: 115 VSLGVQTFDNRLLKKIGRSHQEQDIYDNIDRLKLAGFDNISIDLIYALPTQTMEQVQENV 174

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHA 250
            +AL+  + H+SLY L +E  T+F    + G L LP E +  +++  + Q +  A G   
Sbjct: 175 AKALALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIQELERA-GFEH 233

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVR 309
           YEISN S  G ES HNL YW   +Y G+G GA   V        +  + H P        
Sbjct: 234 YEISNFSKPGFESRHNLMYWDNAEYYGLGAGASGYVN------GVRYKNHGPIRHYMQAV 287

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQG 366
           + G+A V++E LS  +  +E + +GLR + G+S + +E   G N D +       L +QG
Sbjct: 288 EEGNARVQEEHLSQTEMMEEEMFLGLRKKTGVSKRRFEEKFGVNFDQQYGPVVEELTQQG 347

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
            +   +   +R T++G+ + D+V
Sbjct: 348 LLVPDK-DIVRMTKKGLFLGDTV 369


>gi|324993002|gb|EGC24922.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK405]
 gi|327462298|gb|EGF08625.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1]
 gi|327474171|gb|EGF19581.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK408]
          Length = 376

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 204/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAIALGI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLQAV-EAGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEDQYGAVVAELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|254822300|ref|ZP_05227301.1| coproporphyrinogen III oxidase [Mycobacterium intracellulare ATCC
           13950]
          Length = 390

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 191/383 (49%), Gaps = 23/383 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            G+YVH PFCV +C YCDFN++       V  + ++ +   E++          +S++F 
Sbjct: 21  FGIYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLGALRAELELAAARLQAPPVSTVFV 80

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +LD + +++ ++++ EIT EANP S   + F   R AG  R+SLG
Sbjct: 81  GGGTPSLLGGARLVTLLDMVREHFPLAADAEITTEANPESAWPDLFDAIRAAGYTRVSLG 140

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS+  + L  L R H  + +  A   A    F  +S DLIY  P ++       +  A+
Sbjct: 141 MQSVAPRVLGVLDRIHTPNRSADAAREALAAGFEHVSLDLIYGTPGESDDDLLRSVDTAI 200

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  G+  YE+SN
Sbjct: 201 ETGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSEAGMSWYEVSN 260

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S  G E  HNL YW  G + G GPGAH    VG+ R      KHP ++ + +      V
Sbjct: 261 WSRPGGECRHNLGYWDGGQWWGAGPGAHG--YVGTTR--WWNVKHPNAYAERLGAAALPV 316

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISV-----KDWEMLAGRNLDIECERNLQRQGFIER 370
              E L ++    E +++ +RLR+G+ V     ++ E  AG    +  +  L   G    
Sbjct: 317 AGFERLDADTLHTEDVLLKVRLRQGLPVGLLNSEERERAAG----VVADGLLVTTG---- 368

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
               RL  T RG  + D+V+  L
Sbjct: 369 ---DRLVLTDRGRLLADAVVRTL 388


>gi|73748660|ref|YP_307899.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. CBDB1]
 gi|73660376|emb|CAI82983.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. CBDB1]
          Length = 378

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 177/338 (52%), Gaps = 12/338 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NSL +Y+H+PFC+KKC YC F S+  + +    +++     E++   +      + S++F
Sbjct: 4   NSLALYMHFPFCLKKCGYCSFISYPDKLE-SVPDYVNCLKKEIKLRAE---GLCLHSLYF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P  +A I+  I     +    EIT EANP ++ +   +     G+NR+SLG
Sbjct: 60  GGGTPSLLSPSQVADIMSSIQTISHLLPGTEITFEANPGTLSLPYLEQLSGLGINRLSLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  +  L  LGR H+A +A      AR   F  ++ DLIY LP  T+  ++  L   L
Sbjct: 120 IQSFSDAELTMLGRLHDAQQARHIYKQARTAGFDNINLDLIYGLPHSTLLSFKANLSEML 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+SLY LT+E+ T  Y   + G L      +A D Y L + +  + G H YEISN
Sbjct: 180 KLEPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLESAGYHHYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW+   Y+G+G   HS  +       I ++++   W     +N  + 
Sbjct: 240 WAKPGYESRHNLTYWQNRSYLGLGVAGHSFFQNWRTANTIDLDEYLLCW-----QNNSSP 294

Query: 316 VEKEFLSSE--QQADEFLMMGLRLREGISVKDWEMLAG 351
              E ++ +   Q  E +++GLRL +G++ +D E   G
Sbjct: 295 SPSENINVDLANQLAETIILGLRLDKGVTAEDIEARFG 332


>gi|227499814|ref|ZP_03929909.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
 gi|227218118|gb|EEI83386.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
          Length = 381

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 184/339 (54%), Gaps = 18/339 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           G     +G+Y+H PFC KKC YCDF +  H+ R+    E +I++   E+   RQ +   +
Sbjct: 7   GAKMKKVGLYIHIPFCEKKCYYCDFTAFAHLDRW---IEPYIKNLKRELSLYRQ-SLTLT 62

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I +I+ GGGTPS I+ + I+ I+  + K        E ++E NP+S+  +  + Y   GV
Sbjct: 63  IDTIYIGGGTPSYIDEKYISEIVSEVRK--FPCEIKEFSLECNPNSINKDKLKLYEDLGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            RISLGVQS ++  L  +GRNH    AI  I + +N    +SFDL+  LP Q  +  + +
Sbjct: 121 TRISLGVQSFDDLVLNNIGRNHKKDIAIRDIEMIKNFDFDLSFDLMLNLPGQDFSSIKKD 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L    +   DH+S Y L ++KG+ FY +++ G L L  ++  VD++N      +   L+ 
Sbjct: 181 LAYVKALDPDHISWYSLILDKGSRFYALNEKGKLELMDDDREVDIFNYIVDELARLNLNR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH---SRVKVGSHRVAISIEKHPESWLKM 307
           YEISN +  G ES+HN  YW    Y+  G GA    S V+  +    +  E       KM
Sbjct: 241 YEISNFAKPGKESIHNKKYWDIEGYLACGLGASGFLSNVRYSNASNFVIYE-------KM 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +++    +V +EF+S +++  E+++  LR   GI+++++
Sbjct: 294 LKEGKKPIVSREFISQKEREKEYIIFKLRQTRGINLEEF 332


>gi|283777840|ref|YP_003368595.1| oxygen-independent coproporphyrinogen III oxidase [Pirellula
           staleyi DSM 6068]
 gi|283436293|gb|ADB14735.1| oxygen-independent coproporphyrinogen III oxidase [Pirellula
           staleyi DSM 6068]
          Length = 387

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 178/347 (51%), Gaps = 24/347 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSIFF 76
            YVH PFC  +C YC+F         G+++ I S+L     E+ W+ +    R++ ++F 
Sbjct: 18  AYVHVPFCRHRCGYCNFT-----LIAGRDDLIGSYLEALALELSWLER---SRAVDTLFL 69

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P+ +  +L+ + + + ++ + E ++EANP+ ++          GV R+SLG
Sbjct: 70  GGGTPTHLPPRELDRLLELVLRWFPLAEDAEFSVEANPADIDRERAAVLASYGVTRVSLG 129

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            QS   + LR L R+H+A++   A+   +     +S DLI+  P +T+  W+ +L +A++
Sbjct: 130 AQSFRAEKLRVLERDHDAAQIARAVAECKRFASSVSLDLIFGTPGETLDDWKSDLAQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y LTIEKGT F+   + G+L    E +   +Y       +A+G   YE+SN 
Sbjct: 190 LTPQHVSTYGLTIEKGTPFFMRTERGELTKAGEELEAVMYETAIDTLAANGYEHYEVSNF 249

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G    HN  YWR+  +   GPGA S +  G+  V     +   ++L  +R     + 
Sbjct: 250 ARPGFACRHNQTYWRHQPFFAAGPGAASFLG-GTRSVN---HRSTTTYLARLRAGESPIA 305

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW--------EMLAGRNLD 355
           E E LS E  A E L+ GLR   G+   ++        E L GR L+
Sbjct: 306 ESETLSPEDSARERLVFGLRQLGGVHRGEFLGATGYRIEQLGGRALE 352


>gi|328465519|gb|EGF36748.1| coproporphyrinogen III oxidase [Listeria monocytogenes 1816]
          Length = 342

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 179/336 (53%), Gaps = 13/336 (3%)

Query: 12  TGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           T Q S  S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP
Sbjct: 4   TNQSSKESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKGP 59

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  + 
Sbjct: 60  IAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQD 119

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP QT   
Sbjct: 120 HGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEAD 179

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    H
Sbjct: 180 FQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKH 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++
Sbjct: 240 GRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YME 295

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            ++KN     +++ L+ +++ +E + +GLR  +G+ 
Sbjct: 296 PLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVD 331


>gi|124008144|ref|ZP_01692842.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microscilla marina ATCC 23134]
 gi|123986392|gb|EAY26205.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microscilla marina ATCC 23134]
          Length = 376

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 200/386 (51%), Gaps = 24/386 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFF 76
            +Y+H PFC + C YCDF      + V Q N    +++   E+   +       + +I+F
Sbjct: 3   SLYIHIPFCKQACYYCDF-----HFSVNQNNKKLIVEAIKKEIVLQKNYLSNNRLRTIYF 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  Q +A I + I   ++V  N EIT+EANP  +       +++ G+NR+S+G
Sbjct: 58  GGGTPSLLNEQELAGIFETIHHTFSVVPNAEITLEANPDDLTKEKLLLFKRQGINRLSIG 117

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS ++  L++L R HNA+EA  +I +A++  F  +S DLIYA+P      W+ +LQ+ +
Sbjct: 118 TQSFQDACLQYLNRAHNATEAKQSILMAQDRGFDNISIDLIYAIPVANNKVWQEDLQQTV 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  V H+S Y LTIE+ T+F +  +   +   ++  A + +N   +    +    YEISN
Sbjct: 178 SLQVQHISAYCLTIEEKTVFGRQLQKQLINPINDEFASNQFNSLIAHLEQNQFTQYEISN 237

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G  S HN NYW    Y+GIGP AHS    GS R   +I  + + +L+ + KN    
Sbjct: 238 FAKPGFYSQHNSNYWIKNPYLGIGPSAHSY--NGSTR-QFNIANNGK-YLQALAKNT-IP 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE---- 369
            EKE LS   Q +E++M  LR   G  ++        N DI    E       +I+    
Sbjct: 293 FEKEELSKANQVNEYIMTSLRTIWGCDLRK----ISHNFDINLLYENKSYIHEYIDKKLL 348

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
           +++   L+ T  G    D + ++L +
Sbjct: 349 KLEDDVLKLTNNGKLFADKIASDLFI 374


>gi|184200950|ref|YP_001855157.1| putative oxygen-independent coproporphyrinogen III oxidase [Kocuria
           rhizophila DC2201]
 gi|183581180|dbj|BAG29651.1| putative oxygen-independent coproporphyrinogen III oxidase [Kocuria
           rhizophila DC2201]
          Length = 414

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 170/341 (49%), Gaps = 19/341 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPR 69
           +L +YVH PFC  +C YCDFN++        V + ++      E+++ R +     + PR
Sbjct: 28  TLSLYVHVPFCAVRCGYCDFNTYTMEQLGDGVSRADYHADAAAEVRFARSVLDAAGSPPR 87

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+FFGGGTP+L+  + +A +L    +++ ++   E+T+EANP SV    F     AG
Sbjct: 88  PLHSVFFGGGTPTLLPARELAAMLHQARESFGLAPGAEVTVEANPDSVTQETFDVLAAAG 147

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V R+S G+QS     L  L R H  +    A+  A+      S DLI+  P +++  WE 
Sbjct: 148 VTRVSFGMQSAVPHVLAVLERTHTPANVPRAVGWAKERGLGTSVDLIHGTPGESLRDWET 207

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++  L+   DH+S Y L IE GT      + G++     +   D Y L   +    G  
Sbjct: 208 SVEAVLAMEPDHVSAYSLIIEDGTKLAAQIRRGEVPEVDPDDQADKYTLADRMLRDAGFA 267

Query: 250 AYEISN-----HSFLGAE--SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            YE+SN     H     +  S HN+ YWR  D+ GIGPGAHS V      V     KHP 
Sbjct: 268 WYEVSNWSRDAHGRTAQQNRSAHNIAYWRNQDWWGIGPGAHSHVD----GVRWWNLKHPL 323

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            +   VR      V +E L ++ Q  E +M+G+R+ EG+ V
Sbjct: 324 PYTNRVRAGVSPAVGRETLDADTQYVEHVMLGIRISEGLPV 364


>gi|86605492|ref|YP_474255.1| coproporphyrinogen III oxidase [Synechococcus sp. JA-3-3Ab]
 gi|86554034|gb|ABC98992.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. JA-3-3Ab]
          Length = 397

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 182/350 (52%), Gaps = 15/350 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---QWMRQLTG-PRSISSIF 75
             Y+H PFC ++C YCDF + +   ++  E ++Q    E+      R L G P+ ++SIF
Sbjct: 21  AAYLHIPFCRQRCHYCDFATGLGTREL-IETYVQRLCQEIGGAHRYRHLAGDPQPLTSIF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + ++ IL  + +      + EI++EANP ++      GYR  GVNRISL
Sbjct: 80  FGGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGTLTREQLAGYRDLGVNRISL 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L   GR H   E   A+   + + F   + DLI+ LP QT+  W+  LQ  
Sbjct: 140 GVQAFQAELLAACGRLHGVEEIYEAVADLQAVGFENFNLDLIFGLPYQTLEHWQESLQAV 199

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L     H+S+Y LT+E GT F ++++ G+  LPSE   V +Y   + + +  G   YEIS
Sbjct: 200 LEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAMYLTARELLTQAGYIHYEIS 259

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G    HN  YW    Y G G G  S    G  R+      H  ++ + V+   H 
Sbjct: 260 NFARPGYACRHNRVYWENRPYFGFGMG--SVGYEGGRRIQQPKTLH--AYFEQVKAQVHP 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           +      S+E+   + +M+GLRL+EG+ +   +   G     + E+ LQR
Sbjct: 316 LPPPA--SAEEIWMDTVMLGLRLQEGLELATLQERFGSR---KVEQALQR 360


>gi|320547107|ref|ZP_08041403.1| coproporphyrinogen dehydrogenase [Streptococcus equinus ATCC 9812]
 gi|320448233|gb|EFW88980.1| coproporphyrinogen dehydrogenase [Streptococcus equinus ATCC 9812]
          Length = 376

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 205/375 (54%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++Q+ + E +        + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIKNQPVDAYLQALIREFESY----DIKKLRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I  + +  +L  + K+  +S   E TIEANP  +  +  +  + + VNR+SLGVQ+  
Sbjct: 64  TSITAEQLEYLLTNLTKHLDLSVLEEFTIEANPGDLTEDKIEVLKNSAVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ +GR+HN ++  + I +L +  F  +S DLIYALP QTM   +  + +A++  + 
Sbjct: 124 DKHLKQIGRSHNEAQIYSTIENLKKAGFHNISIDLIYALPGQTMEDVKENVAKAIALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP E++  +++    S    +G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLQLPQEDLEAEMFEYIISELEKNGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G+G GA   +    +R    I    + +LK + + G+A + +E 
Sbjct: 244 FESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAISE-GNARLSEET 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI---ERVQFS 374
           L+ E+  +E L +GLR + G+S+  +E   G + +    +  R L  QG +   ++V   
Sbjct: 299 LTKEEMMEEELFLGLRKKSGVSIARFEEKFGVSFEERYGQIVRELCNQGLLVPDDKV--- 355

Query: 375 RLRCTQRGMTMLDSV 389
            +R T++G+ + D+V
Sbjct: 356 -VRMTKKGLFLGDTV 369


>gi|118463403|ref|YP_881013.1| coproporphyrinogen III oxidase [Mycobacterium avium 104]
 gi|254774606|ref|ZP_05216122.1| coproporphyrinogen III oxidase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118164690|gb|ABK65587.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mycobacterium avium 104]
          Length = 390

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 193/379 (50%), Gaps = 13/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             G+YVH PFCV +C YCDFN++       V  + ++ +  TE++       P  ++++F
Sbjct: 20  PFGLYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLGALRTELELAAARLRPPPVNTVF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +AL+LD + +++ ++ + EIT EANP S     F   R AG  R+SL
Sbjct: 80  VGGGTPSLLGGARLALLLDMVREHFALAPDAEITTEANPESTWPEFFDAIRAAGYTRVSL 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS+  + L  L R H  + +  A   A    F  +S DLIY  P ++       L  A
Sbjct: 140 GMQSVAPRVLGVLDRIHTPNRSADAAREALAAGFEHVSLDLIYGTPGESDEDLLWSLDTA 199

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  GL  YE+S
Sbjct: 200 IETGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSQAGLSWYEVS 259

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G +  HNL YW  G + G GPGAH    VG+ R      KHP ++ + +      
Sbjct: 260 NWSRPGGQCRHNLGYWDGGQWWGAGPGAHG--YVGTTRWWNV--KHPNAYAERLNAAALP 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           V   E L SE    E +++ +RLR+G+ V   ++L     + E  + +   G + R    
Sbjct: 316 VAGFEQLGSEALHTEDVLLKIRLRQGLPV---DLL--NPAERERVQGVVADGLLVR-DGD 369

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RL  T RG  + D V+  L
Sbjct: 370 RLVLTPRGRLLADGVVRTL 388


>gi|322514560|ref|ZP_08067593.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Actinobacillus ureae ATCC 25976]
 gi|322119499|gb|EFX91586.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Actinobacillus ureae ATCC 25976]
          Length = 352

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 18/320 (5%)

Query: 46  VGQENFIQSFLTEMQ----WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT 101
           + +  +IQ  L ++       ++  G R I SIF GGGTPSL   + IA +L  + K   
Sbjct: 2   IPEAEYIQHLLADLSKDLTAYQEAIGERKIHSIFIGGGTPSLFAAEGIAYLLAEVEKRIP 61

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
              ++EIT+EANP + E   F GY + GV RIS+G+QS E + L  LGR H+++EA  A+
Sbjct: 62  FEEHIEITLEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDSNEAKQAV 121

Query: 162 HLARNI----FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             A+N         + DL++ LP Q++ Q   +L++ ++ A  HLS YQLTIE  T+FY 
Sbjct: 122 IFAQNSAKSGLQSFNIDLMHGLPNQSVAQALDDLRQGIALAPPHLSWYQLTIEPNTMFYY 181

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
                   LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY+ 
Sbjct: 182 RQP----TLPDDDELWDIFEQGHQLLTAAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLA 237

Query: 278 IGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           IG GAH ++   +  +   S  KHP+ +++     G     ++ +    +  EF M  LR
Sbjct: 238 IGCGAHGKISYPTGEIYRFSKTKHPKGYMR-----GEYRYSQDLIELADRPFEFFMNRLR 292

Query: 337 LREGISVKDWEMLAGRNLDI 356
           L E    +++E   G + +I
Sbjct: 293 LFEATPKQEFEFYTGLDREI 312


>gi|21325063|dbj|BAB99685.1| Coproporphyrinogen III oxidase and related FeS oxidoreductases
           [Corynebacterium glutamicum ATCC 13032]
          Length = 330

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 165/333 (49%), Gaps = 10/333 (3%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           M  L  PR   +IF GGGTPSLI    +A +L  +   + ++   E+T E+NP S     
Sbjct: 1   MASLDNPRQAETIFIGGGTPSLIGADGLARVLGAVRNTFGIADGAEVTTESNPESTSPEF 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
           F G R+AG NRISLG+QS     L+ L R H     +AA   AR   F  ++ D+IY  P
Sbjct: 61  FDGLREAGYNRISLGMQSASSSVLKVLDRTHTPGRPVAAAKEAREAGFEHVNLDMIYGTP 120

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T       L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D + L  
Sbjct: 121 TETDDDVRKTLDAVLEANVDHVSAYSLIVEDGTAMARKVRKGELPAPDEDVYADRFELID 180

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +   + G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS +     R   +I KH
Sbjct: 181 ARLRSAGFDWYEVSNWAKPGGECKHNMGYWVDGDWWGAGPGAHSHI---GDRRFYNI-KH 236

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +   +      + E E L++E    E +M+GLRL++G+ +  +   A   +D    R
Sbjct: 237 PARYSAQIAAGELPIKETERLTAEDHHTERVMLGLRLKQGVPLNLFAPAARPVID----R 292

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++   G +       L  T  G  + D +IA++
Sbjct: 293 HIA-GGLLHVNALGNLAVTDAGRLLADGIIADI 324


>gi|257466116|ref|ZP_05630427.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917273|ref|ZP_07913513.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691148|gb|EFS27983.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 365

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 189/372 (50%), Gaps = 22/372 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC+ KC YCDF S       G+ N+ + +L  +     L       +I+FGGG
Sbjct: 11  AVYIHIPFCLHKCEYCDFTSFS-----GKLNWKKRYLEALYQEISLYEHSYYDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + IA IL+ +  +       EIT+E NP ++ +   Q Y + GVNR+S+G+QS
Sbjct: 66  TPSLLEGKEIAKILELLPHD----EKTEITVECNPKTLNLKKLQDYFEIGVNRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + E+ L+ LGR H   EA     +AR I F  +S D+++ALP QT+ + E +++  L   
Sbjct: 122 MNEKYLKMLGRLHTVQEAKEVFQMAREIGFQNISVDMMFALPTQTLEEVEEDIENFLCLD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L  E+ T F++  + G       +V  ++Y         +    YEISN + 
Sbjct: 182 ADHISIYSLIWEENTPFFQKLEKGIYQRTENDVEAEMYQKIIETMKENSYEHYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+  +Y+GIG GA   ++     +  S ++  E +   V KN     E+
Sbjct: 242 SGYFSRHNQKYWQNQNYLGIGLGASGYLE----EIRYSNDRDFEHYFSNVNKNRFPREEE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+ E       ++G R      +  W   +G+   I CE   ++   I+R +    + 
Sbjct: 298 EILNGEMIEQYRYLLGFR-----QLNTWLTPSGKYKKI-CETLFEKSYLIKREE--EYQI 349

Query: 379 TQRGMTMLDSVI 390
           TQ+G+   + ++
Sbjct: 350 TQKGLFFFNDML 361


>gi|298207568|ref|YP_003715747.1| coproporphyrinogen III oxidase [Croceibacter atlanticus HTCC2559]
 gi|83850204|gb|EAP88072.1| coproporphyrinogen III oxidase [Croceibacter atlanticus HTCC2559]
          Length = 376

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 193/377 (51%), Gaps = 14/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDF  H       ++  + +  TE+  +R++    ++  I+FGGGT
Sbjct: 4   IYIHIPFCKQACHYCDF--HFSTSLKKKDELVNTLKTELS-LRKVELTNTVECIYFGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+  + +  +++ +  N+ VS   EIT+EANP  +  +      K+ +NR+S+G+QS 
Sbjct: 61  PSLLSAEELNSLIETVYTNYNVSETPEITLEANPDDLTKDKITELGKSKINRLSIGIQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L+ + R HNA EA+  I  ++  F  +S DLIY +P  T  +W+  L  AL   + 
Sbjct: 121 FEDDLKLMNRAHNAKEALQCIEFSKTEFDNISIDLIYGVPGMTTQKWKENLNIALQLDIP 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT+E  T   +  + G +    +++A   +++        G   YE SN    G
Sbjct: 181 HISSYALTVEPNTALKRFIEKGVVPPVDDDLAKQHFDILVETLQQAGYSNYEFSNFGKQG 240

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S +N  YW    Y+GIGP AHS    G  R + +I  +P+ ++K +++ G    E E 
Sbjct: 241 YHSNNNTAYWTGKSYLGIGPSAHSY--NGKQR-SWNINNNPK-YIKSIQQ-GIIPNEVET 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSRL 376
           LS   + +E++M GLR   GIS+   E   G N      +  Q + FIE     +    +
Sbjct: 296 LSVTDRYNEYVMTGLRTIWGISLSKIEKEFGLNFKTYVLQ--QAKYFIEDHLLFLDGDTI 353

Query: 377 RCTQRGMTMLDSVIANL 393
             T++G  + D + + L
Sbjct: 354 IVTKKGKFLSDGIASEL 370


>gi|310829111|ref|YP_003961468.1| hypothetical protein ELI_3546 [Eubacterium limosum KIST612]
 gi|308740845|gb|ADO38505.1| hypothetical protein ELI_3546 [Eubacterium limosum KIST612]
          Length = 379

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 10/378 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++G+YVH PFC +KC YCDF S     +     +  +   E++      G     +++FG
Sbjct: 3   NVGIYVHVPFCRQKCRYCDFPSWAGLGEAEAGRYFDAVCLEIKAFAAEHGRLPAGTVYFG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPS +    I  ++D I + + +  + +E TIEANP ++     + YR  G+NR+S+G
Sbjct: 63  GGTPSYVAAGYIGKVMDCIRECFKLPEAAIEATIEANPGTLTDAKCRAYRSMGLNRVSMG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+  ++ L+ LGR H  ++ +A++ L     F  +S DL++ LP QT+     ++ R  
Sbjct: 123 LQTTSDRGLKALGRIHTCADFVASLDLLVGAGFENISADLMFGLPGQTLEDVRQDIDRLT 182

Query: 196 SYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++A + H+S Y L IE+GT F  +++ G L +P E +   + +      + +G   YE+S
Sbjct: 183 AFAPIKHISCYSLKIEEGTAFDTLYRQGKLPVPDEGLERQMQHAIIDGLAENGFEQYELS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HN  YW    Y+G G GA S  K       +++    E +  +V +    
Sbjct: 243 NFARNGWESRHNSLYWVMKPYVGFGLGAASYYKEERRTNVMNM----EDYCALVTQGKAP 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQ 372
           V+E   L ++++  +F+ +GLR   G+   D+  L G +   D E   +L  +G + R +
Sbjct: 299 VLEAHTLDAQEKKGDFMFLGLRRMCGVDDADYRELFGSSFFEDFEEIGSLVERGLLTR-E 357

Query: 373 FSRLRCTQRGMTMLDSVI 390
              +R T +G  + + V 
Sbjct: 358 DQVIRLTPKGQDLANQVF 375


>gi|307705108|ref|ZP_07641987.1| coproporphyrinogen III oxidase [Streptococcus mitis SK597]
 gi|307621339|gb|EFO00397.1| coproporphyrinogen III oxidase [Streptococcus mitis SK597]
          Length = 336

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 188/327 (57%), Gaps = 14/327 (4%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + +S+++ GGGTP+ +    + ++L G+ KN  +S   E+TIEANP  ++ +     + +
Sbjct: 11  QKLSTLYIGGGTPTALSASQLEVLLKGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNS 70

Query: 129 GVNRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            VNR+SLGVQ+ +++ L+ +GR+H   +  E I  + LA   F  +S DLIYALP QTM 
Sbjct: 71  AVNRVSLGVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAG--FDNISIDLIYALPGQTME 128

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q +  + +A+   + H+SLY L +E  T+F    + G L LP E +  +++    +    
Sbjct: 129 QVKENVAKAIGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELER 188

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN S  G ES HNL YW   +Y GIG GA   V    ++    I +H   +L
Sbjct: 189 VGFEHYEISNFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YL 244

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNL 362
             V + G+A + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L
Sbjct: 245 SAV-EEGNARITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIVRDL 303

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +QG ++ ++  R+R T+RG+ + D+V
Sbjct: 304 VQQGLMQ-IEGDRVRMTKRGLFLGDTV 329


>gi|228948030|ref|ZP_04110315.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228811616|gb|EEM57952.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 378

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 188/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            VY+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AVYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 351

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 352 EESD-GYVRLTRKGKLLGNEVFQSFLI 377


>gi|229019542|ref|ZP_04176358.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1273]
 gi|229025783|ref|ZP_04182182.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1272]
 gi|228735491|gb|EEL86087.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1272]
 gi|228741708|gb|EEL91892.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1273]
          Length = 379

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYKQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E    
Sbjct: 298 DVHVVTEKEKMEEELFLGLRKTKGVSKIEFQKKFNMEMDQVFAKQLQSNQEQGLLEERD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GYVRLTRKGKLLGNEVFQSFLI 378


>gi|86156670|ref|YP_463455.1| coproporphyrinogen III oxidase, anaerobic [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773181|gb|ABC80018.1| coproporphyrinogen III oxidase, anaerobic [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 379

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 167/333 (50%), Gaps = 6/333 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVH+P+C  +CPYCDF     R   G   + ++   E+          ++ S++
Sbjct: 2   ARPFGVYVHYPYCTHRCPYCDFAVTTER-PPGAGRYARAVRAELGLRAAAFEGLALRSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL + + I  +LD I   + +++  E+T+E NP S +    + +R AGVNRIS+
Sbjct: 61  LGGGTPSLWDAEEIRDVLDAIRGRFGLAAEAEVTLEVNPESSDPARLEAWRAAGVNRISV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +   L  LGR H    A  AI  A      +S DLIY   + ++     + +RA+
Sbjct: 121 GVQSFDPGVLAKLGRRHGPERAERAIREASAAIGNVSVDLIYGARRSSVETARRDAERAV 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                H+S Y LT+E   +       +M ++G L LPS+   +      ++     GL  
Sbjct: 181 EAGAAHVSAYALTLEPDVMAEEVPLARMRREGRLPLPSDEDTLAQAAALRAALRRLGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES+HN  YWR+  Y+G+G GA+   +  +  V     +   +WL  V  
Sbjct: 241 YEISNFARPGRESVHNGLYWRHESYLGLGAGAYGCRRGEAGSVRYGNLRDAGAWLAAVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 E++ + +    +E LM+ LR REG  +
Sbjct: 301 GRLPTAEEDRIDARADRNERLMLALRTREGAPL 333


>gi|322411969|gb|EFY02877.1| coproporphyrinogen III oxidase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 376

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 201/372 (54%), Gaps = 15/372 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF S V       + ++++ + E +          + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDF-SKVFIQNQPVDAYLEALIQEFESY----DINDLKTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + I    +  +L  + +N  +    E TIEANP  +  +  +  +++ VNRISLGVQ+  
Sbjct: 64  TAITAAQLKYLLSHLERNLNLDYLEEFTIEANPGDLTPDKIEVLKQSSVNRISLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +AL+  + 
Sbjct: 124 NKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLAQVKENVAKALALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEISN +  G
Sbjct: 184 HLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+A + +E 
Sbjct: 244 FESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GNARLNEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLR 377
           L  E+  +E L +GLR + G+ ++ ++   G + +       R+LQ QG + +   + +R
Sbjct: 299 LRKEEMMEEELFLGLRKKTGVFIQRFQEKFGISFEERYGTIVRDLQDQGLLVKDD-AFVR 357

Query: 378 CTQRGMTMLDSV 389
            T++G+ + DSV
Sbjct: 358 MTKKGLFLGDSV 369


>gi|237744988|ref|ZP_04575469.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229432217|gb|EEO42429.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 367

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 182/327 (55%), Gaps = 13/327 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L EM+ + ++    +   +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGSDSQIERYVNYLLKEMEIYSQKYDLSQKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   ++  IL      ++   N EITIE NP +V+ N  + YRK G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDDLKKIL----SKFSYDKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  + +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT+   + +L++ ++ 
Sbjct: 121 TFNDDNLKVLGRIHNSQEAIEVYNLARECGFDNISLDIMFSLPNQTLVMLQNDLEKLVNL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
             +H+S+Y L  E+GT F++  K G L     ++  ++Y  + + + S   +H YEISN 
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEANMYEYIIEYLKSKEYIH-YEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S +G ES HN  YW   +Y+G+G  A   +    ++   ++    + +   + K+   + 
Sbjct: 240 SKIGFESRHNSIYWENKNYLGVGLSAAGYLDNVRYKNFFNL----KDYYNNLDKDILPID 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           EKE L+ +       ++G RL   I V
Sbjct: 296 EKEILTEKDIEQYRYLVGFRLLNKIIV 322


>gi|156331105|ref|XP_001619142.1| hypothetical protein NEMVEDRAFT_v1g152251 [Nematostella vectensis]
 gi|156201738|gb|EDO27042.1| predicted protein [Nematostella vectensis]
          Length = 264

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 140/264 (53%), Gaps = 2/264 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       ++  I   + E++  ++     +I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACYYCDF--HFSTSLKKKDELISCLVKELEIRKEELTDETIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    + L++D + KN+ VS N EIT+EANP  +  N      K  +NR+S+GVQS
Sbjct: 61  TPSLMSIDELQLLIDTVYKNYRVSKNPEITLEANPDDLSKNQIIKLSKTPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+F+ R HNA EA   +  A + F  ++ DLIY +P  +  +W   LQ    + V
Sbjct: 121 FFEEDLQFMNRAHNAEEAKDCLSAAISSFDNITVDLIYGIPNMSNDRWRENLQTLFDFGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y LT+E  T      K G      E  A   + +    T   G   YEISN    
Sbjct: 181 NHISSYALTVEPKTALDSFIKQGKYPDVDEKAARAHFEILVEETQKQGFVHYEISNFGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAH 283
              S HN +YW+   YIGIGP AH
Sbjct: 241 NYFSKHNTSYWQGKKYIGIGPSAH 264


>gi|302560709|ref|ZP_07313051.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           griseoflavus Tu4000]
 gi|302478327|gb|EFL41420.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           griseoflavus Tu4000]
          Length = 349

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 153/287 (53%), Gaps = 11/287 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMR 63
           + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++  R
Sbjct: 25  LAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYAETLIDEVRLAR 84

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++++ E+T EANP SV+   
Sbjct: 85  KVLGDDPREVRTVFVGGGTPTLLAADDLVRMLGAIREEFGLAADAEVTTEANPESVDPAY 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALP 180
               R  G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  P
Sbjct: 145 LAALRAGGFNRISFGMQSARQHVLKVLDRTHTPGRPEACVAEARAEGFAHVNLDLIYGTP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + +
Sbjct: 205 GESDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIAE 264

Query: 241 SITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRV 286
            + S  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V
Sbjct: 265 EMLSGAGFDWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHV 311


>gi|229174992|ref|ZP_04302511.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus MM3]
 gi|228608453|gb|EEK65756.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus MM3]
          Length = 379

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 185/389 (47%), Gaps = 27/389 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYSQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG---- 312
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G    
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 313 --HAVVEKEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQG 366
             HAV EKE +  E      L +GLR  +G+S     K + M   +    + ++N Q QG
Sbjct: 298 DVHAVTEKERMEEE------LFLGLRKTQGVSKILFQKKFNMEMNQVFAKQLQKN-QEQG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +E      +R T++G  + + V  +  +
Sbjct: 351 LLEEKD-GYVRLTRKGKLLGNEVFQSFLI 378


>gi|307244326|ref|ZP_07526440.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492292|gb|EFM64331.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus stomatis DSM 17678]
          Length = 382

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 175/328 (53%), Gaps = 14/328 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSIF 75
           G+Y+H PFC KKC YCDF S      VG    I  +L+    E    +       I +IF
Sbjct: 5   GLYIHIPFCAKKCGYCDFTS-----LVGNGTQIDDYLSYLDKEFNLYKAGNLIDDIETIF 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++    +  +   + KN  +S   E T+E+NP S+  +  +  +  G+NR+S+
Sbjct: 60  IGGGTPSILSASQLERLFSIVRKNVDLSKLREYTMESNPGSLTRDKLELMKAGGLNRLSI 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ ++  L+FL R H   E + +  LAR++ F  ++ DL++A   QT+  W   L+R 
Sbjct: 120 GLQASQDHLLKFLERIHTYEEFLESYRLARSVGFDNINIDLMFAFQGQTLEDWRETLERV 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   DH+S Y L IE+GT F+ M++DG L    E+  V +Y  T    +  G   YEIS
Sbjct: 180 VSLEPDHISAYSLIIEEGTKFFNMYEDGSLTDYDEDEYVQMYRYTIDYLADKGYGQYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +    E  HNL YW   +Y G+G GA     +G  R   +  K   ++ + +      
Sbjct: 240 NFAKQDKECRHNLIYWDDREYYGLGLGASGY--LGGKRY--TNYKDMFNYYEKLDAGERP 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGIS 342
           +  +E +S+ ++ +E+L++GLR  EGIS
Sbjct: 296 IDFEETISNREKLNEYLILGLRKIEGIS 323


>gi|229169065|ref|ZP_04296781.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH621]
 gi|228614474|gb|EEK71583.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH621]
          Length = 379

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 175/356 (49%), Gaps = 12/356 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++Q    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLQYLEKEIINTVQKVPFESMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRRHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFTKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIE 369
           +   ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E
Sbjct: 298 DVHPVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLE 353


>gi|294785800|ref|ZP_06751088.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294487514|gb|EFG34876.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 367

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 196/376 (52%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E+  + ++        +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   +    L+ I   ++   N EITIE NP +V++N  +GY+K G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDS----LEKILSKFSYDKNTEITIEINPKTVDINKLKGYKKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +  +L+ LGR HN+ E+I   +LAR   F  +S D++++LP QT+   + +L++ ++ 
Sbjct: 121 TFDNDNLKVLGRIHNSQESIEVYNLARECGFENISLDIMFSLPNQTLAMLQNDLEKLVNL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW   +Y+G+G  A   +    ++   ++    + +   + KN   + E
Sbjct: 241 KKGFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFFNL----KDYYNNLDKNILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+ E       ++G RL   I V   + L        C  +L ++G++   +   + 
Sbjct: 297 KEILTQEDIEQYRYLVGFRLLNKIIVPSEKYLE------RC-VSLYKEGYLIEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I+N 
Sbjct: 349 LSHKGLMLFNDFISNF 364


>gi|70726334|ref|YP_253248.1| coproporphyrinogen III oxidase [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447058|dbj|BAE04642.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           haemolyticus JCSC1435]
          Length = 373

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 181/336 (53%), Gaps = 12/336 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFCV+ C YCDFN +    K   + +I + + EM + +     + + +++ GGGT
Sbjct: 6   AYIHIPFCVRICTYCDFNKYFID-KQPVDEYIAALIKEMSFSKT----KQLETMYVGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +L  I   +++  N E + EANP  + +N  +  ++ GVNRIS+GVQ+ 
Sbjct: 61  PTALSEMQLERLLQAINSKFSI--NGEFSFEANPDELTLNKVKLLKQYGVNRISMGVQTF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + + L+ LGR HN  +   A++ AR      +S DL+Y LP+QT+  +   L +A++  +
Sbjct: 119 KPELLKILGRTHNTQDIYNAVNNARKAGINSISLDLMYHLPEQTIDDFADSLNQAINMDI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L +E  T FY M++ G L LP+E++  ++Y       +      YEISN +  
Sbjct: 179 DHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMKTLNQTDFKQYEISNFAKT 238

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW   +Y G G GA   V+ G     ++  +H   ++  +      V+   
Sbjct: 239 NHESDHNKVYWFNEEYYGFGAGASGYVE-GERYTNLNPVRH---YIDAINNGKRPVLTSS 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +  ++ +E + +GLR+ +G++ + +++  G+ LD
Sbjct: 295 CPTLNEKMEEEMFLGLRMNQGVNRERFKLKFGQTLD 330


>gi|296876332|ref|ZP_06900384.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           15912]
 gi|296432622|gb|EFH18417.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           15912]
          Length = 376

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 198/377 (52%), Gaps = 25/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           YVH PFC + C YCDF+   ++   V    ++ IQ F  E     ++T  R++   + GG
Sbjct: 9   YVHIPFCTQICFYCDFSKVFIKNQPVDAYLDHLIQEFRRE-----EITNLRTL---YIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    +  +L  + K+  +S   E+TIEANP  ++ +     + + VNR+SLGVQ
Sbjct: 61  GTPTALTADQLEYLLKELTKSLDLSQMEELTIEANPGDLDPDKIAVLKDSPVNRVSLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + + L+ +GR+H   +    I  L    F  +S DLIYALP QTM Q +  + +AL+ 
Sbjct: 121 TFDNRLLKKIGRSHQEQDIYDNIDRLKLAGFDNISIDLIYALPTQTMEQVQENVAKALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
            + H+SLY L +E  T+F    + G L LP E +  +++  + Q +  A G   YEISN 
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIQELERA-GFEHYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHAV 315
           S  G ES HNL YW   +Y G+G GA   V        +  + H P        + G+A 
Sbjct: 240 SKPGFESRHNLMYWDNAEYYGLGAGASGYVN------GVRYKNHGPIRHYMQAVEEGNAR 293

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQ 372
           V++E LS  +  +E + +GLR + G+S K +E   G N D +       L +QG +   +
Sbjct: 294 VQEEHLSQTEMMEEEMFLGLRKKTGVSKKRFEEKFGVNFDQQYGPVVEELTQQGLLVPNK 353

Query: 373 FSRLRCTQRGMTMLDSV 389
              +R T++G+ + D+V
Sbjct: 354 -DIVRMTKKGLFLGDTV 369


>gi|307718820|ref|YP_003874352.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           thermophila DSM 6192]
 gi|306532545|gb|ADN02079.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Spirochaeta thermophila DSM 6192]
          Length = 410

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 193/404 (47%), Gaps = 25/404 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + A    + G+G   + VYVH PFC ++C YCDF S         E +++  L  ++ M 
Sbjct: 7   MEAVRAILEGRGGYPVSVYVHVPFCARRCRYCDFFSVAGAGVRVMEGYVERVLEVLEQML 66

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNF 122
            L  P  I +++ GGGTP+++  +    +L GI +   V    VE T+E NP  V+    
Sbjct: 67  ALLRPSEIPTVYVGGGTPNVLPLRLWERLLKGIRERVEVWGRPVEWTVEVNPEWVDEEKV 126

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +   + GV R+SLGVQ L+E  LR +GR     E   A+ +      R+S DL+   P+ 
Sbjct: 127 EVLGEGGVTRVSLGVQGLDEGFLRLMGRGAGRREVERAVEVLAGWGGRVSVDLLAGRPRG 186

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                  EL+    +   H+S+Y LT+E+GT+   M + G++V+P E      +      
Sbjct: 187 MSGDVVRELEEVSGWGAGHVSVYGLTVEEGTVLGAMVRRGEVVMPDEEELAGEWEAICRW 246

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAISIEKH 300
               G   YE+SN +  G E LHNL YWR   Y+G+GP A S +  K G  RV       
Sbjct: 247 FGERGFVRYEVSNFALPGEECLHNLRYWRLEPYLGVGPSAVSTLPGKEGPVRV------- 299

Query: 301 PESWLKMVRKNGHAVVEK------EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                + VR  G  V E       E +  +    E+ MMGLR REG+  + +  + G  +
Sbjct: 300 -----RQVRDVGRFVAEGGVWEEVEVIGPQAFLLEWFMMGLRTREGVEGERFRRVWGVGV 354

Query: 355 D---IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +    E  R     G  E  + S +R ++ G+ +LDS++  L +
Sbjct: 355 EEVLGEVGRRWCGWGAAEMGE-SGIRLSEHGLDILDSLLKALPI 397


>gi|307247835|ref|ZP_07529871.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306855637|gb|EFM87804.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
          Length = 352

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 171/322 (53%), Gaps = 22/322 (6%)

Query: 46  VGQENFIQSFLTEMQWMRQLT------GPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
           + +  +IQ  L ++   + LT      G R I SIF GGGTPSL   + IA +L  + K 
Sbjct: 2   IPEAEYIQHLLADLS--QDLTAYQLAIGNRKIHSIFIGGGTPSLFSAEGIAYLLAEVEKR 59

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
                ++EIT+EANP + E   F GY + GV RIS+G+QS E + L  LGR H+++EA  
Sbjct: 60  IPFEEHIEITLEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDSNEAKQ 119

Query: 160 AIHLARNI----FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           A+  A+N         + DL++ LP Q++ Q   +L++ ++ A  HLS YQLTIE  T+F
Sbjct: 120 AVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALDDLRQGIALAPPHLSWYQLTIEPNTMF 179

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
           Y         LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY
Sbjct: 180 YYRQP----TLPDDDELWDIFEQGHQLLTAAGYEQYETSAYAKKGYQCCHNLNYWRFGDY 235

Query: 276 IGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG 334
           + IG GAH ++   +  V   S  KHP+ +++     G     ++ +    +  EF M  
Sbjct: 236 LAIGCGAHGKISYPTGEVYRFSKTKHPKGYMR-----GEYRYSQDLIELADRPFEFFMNR 290

Query: 335 LRLREGISVKDWEMLAGRNLDI 356
            RL E    +++E   G + +I
Sbjct: 291 FRLLEATPKQEFEFYTGLDREI 312


>gi|262068236|ref|ZP_06027848.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fusobacterium periodonticum ATCC 33693]
 gi|291378104|gb|EFE85622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fusobacterium periodonticum ATCC 33693]
          Length = 367

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 195/376 (51%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E+  + ++    +   +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGTDNQIEKYVNYLLKEIDIYSKKYDLSKKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   ++  IL      ++   N EITIE NP +V++N  + YR  G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDSLKRIL----SRFSYDDNTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  + +L+ LGR HN+ EAI   ++AR + F  +S D++++LP QT+   +++L++ +S 
Sbjct: 121 TFNDDNLKILGRIHNSEEAIEVYNMAREVGFENISLDIMFSLPNQTLEMLKVDLEKLISL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F+K  K G L      +   +Y        + G   YEISN S
Sbjct: 181 NPEHISIYSLIWEEGTKFFKDLKSGKLKETDNELEATMYEYIIDYLKSKGYEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E+ HN  YW   +Y+G+G  A     +G+ R       H + +   + KN   V E
Sbjct: 241 KKDFEARHNSIYWENKNYLGLGLSAAGY--LGNLRYKNFF--HLKDYYDKLDKNILPVDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L+ +       ++G RL     V   E L       +CE  L++  ++ + +   + 
Sbjct: 297 REELTEDDIEQYRYLVGFRLLNKPLVPSKEYLE------KCEI-LEKDAYLIKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I N 
Sbjct: 349 LSDKGLMLFNDFIENF 364


>gi|116872907|ref|YP_849688.1| coproporphyrinogen III oxidase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741785|emb|CAK20909.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 385

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 195/370 (52%), Gaps = 15/370 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
           NM    + S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    G
Sbjct: 3   NMNQSSNESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKG 58

Query: 68  P-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           P   + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +
Sbjct: 59  PIAPVDTVFVGGGTPTTLNEAQIARLCTAIQDILPLKKDIEFSFEANPGDLSLSKVQTMQ 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             GVNRIS+GVQS   + L+ +GR H   +   ++   R I F  +S DLI++LP Q   
Sbjct: 119 DHGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQKEA 178

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++  L++A+   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    
Sbjct: 179 DFKDTLKQAIDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEK 238

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           +    YEISN +  G +S HN+ YW    Y G G GAH  +    +     I+K    ++
Sbjct: 239 NNRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYIGDTRYSNFGPIKK----YM 294

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR- 364
           + +++N     +++ L+ +++ +E + +GLR  +G++   ++   G+NLD    + +++ 
Sbjct: 295 EPLQENQLPTFQQKELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQNLDTTFAKAIEKT 354

Query: 365 --QGFIERVQ 372
             +G++E  Q
Sbjct: 355 TAKGWLENNQ 364


>gi|311895980|dbj|BAJ28388.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Kitasatospora setae KM-6054]
          Length = 409

 Score =  189 bits (479), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 172/344 (50%), Gaps = 14/344 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQ 64
           + G G    G Y+H P+C  +C YCDFN++             QE +  + + E++  R+
Sbjct: 22  LHGLGERPFGFYLHVPYCASRCGYCDFNTYTATELRSSGAVASQETYADNVIAEIRQARR 81

Query: 65  LTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G     + ++F GGGTP+L+  +++  +L  + + + ++   E+T EANP SV+    
Sbjct: 82  VLGEVDLPVETVFLGGGTPTLLPARDLVRMLAALREEFGLAPGAEVTTEANPESVDPAYL 141

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R+ G NRIS G+QS     L  L R+H      A +  AR   F  ++ DLIY  P 
Sbjct: 142 AELREGGYNRISFGMQSARPHVLALLDRHHTPGRPEACVAEARAAGFAHVNLDLIYGTPG 201

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W++ L  A+    DH+S Y L +E GT      K G+L +  ++V  D Y + ++
Sbjct: 202 ESDQDWQVSLDAAIGAGPDHVSAYSLIVEDGTRLAARVKRGELPMIDDDVHADRYLMAET 261

Query: 242 ITSAHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
             +A G H YE+SN +        HN  YW   D+ G GPGAHS V      V     KH
Sbjct: 262 ALAAAGYHWYEVSNWATTPEGRCRHNELYWTGADWWGAGPGAHSHVG----GVRWWNAKH 317

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           P ++ + + +     + +E L+ E +  E +++ LRL EG  + 
Sbjct: 318 PAAYAQALAEGRTPALGREVLADEDRRVERILLELRLAEGCPLD 361


>gi|289550646|ref|YP_003471550.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent [Staphylococcus lugdunensis HKU09-01]
 gi|289180178|gb|ADC87423.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent [Staphylococcus lugdunensis HKU09-01]
          Length = 373

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 175/323 (54%), Gaps = 12/323 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   ++++ + + EM          +I +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIA-KQPVDDYLDALIKEMHTRLN----PNIETMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  + +  +L  I K +T+S   E T EANP  +     +  +  GVNRIS+GVQ+ +
Sbjct: 62  TALNIKQLEKLLKAINKLFTISG--EYTFEANPDELTFQKVKLLKDYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   A+  A       +S DL+Y LP+QT+  ++  ++RALS  ++
Sbjct: 120 PELLTILGRTHNTQDIYQAVDYANKADISSISLDLMYHLPQQTLDDFKDSIERALSMDIN 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY +++ G L LP+E++  D+Y       +      YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNLYRKGKLKLPNEDLGADMYQYLMHRLNHSKFQQYEISNFAEKG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HN+ YW+  +Y G G GA   V  G     ++   H   ++K V+ +   ++    
Sbjct: 240 HASTHNMTYWKNEEYYGFGAGASGYVN-GKRYTNVNPVNH---YIKAVQADKPPMLSFTI 295

Query: 321 LSSEQQADEFLMMGLRLREGISV 343
            + ++Q +E + +GLR+ +G+++
Sbjct: 296 PTIKEQMEEEMFLGLRMNKGVNI 318


>gi|229093387|ref|ZP_04224492.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-42]
 gi|228689981|gb|EEL43784.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-42]
          Length = 378

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 186/383 (48%), Gaps = 15/383 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +   + + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRLFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIERVQ 372
           +   ++ +++ +E L +GLR  +G+S     K + M   +    + + N Q QG +E   
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMNQVFAKQLQNN-QEQGLLEESN 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +R T++G  + + V  +  +
Sbjct: 356 -GYVRLTRKGKLLGNEVFQSFLI 377


>gi|147669419|ref|YP_001214237.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dehalococcoides sp. BAV1]
 gi|146270367|gb|ABQ17359.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dehalococcoides sp. BAV1]
          Length = 378

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/338 (33%), Positives = 179/338 (52%), Gaps = 12/338 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NSL +Y+H+PFC+KKC YC F S+  + +    +++     E++ +R  T    + S++F
Sbjct: 4   NSLALYMHFPFCLKKCGYCSFISYPDKLE-SVPDYVNCLKKEIK-LR--TEGLCLHSLYF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P  +A I+  I     +    EIT EANP ++ +   +     G+NR+SLG
Sbjct: 60  GGGTPSLLSPSQVADIMSSIQTVSHLLPGAEITFEANPGTLSLPYLKQLSGLGINRLSLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  +  L  LGR H+A +A      AR + F  ++ DLIY LP  T+  ++  L   L
Sbjct: 120 IQSFSDAELTMLGRLHDAQQARHIYTQARISGFDNINLDLIYGLPHSTLLSFKANLSEML 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+SLY LT+E+ T  Y   + G L      +A D Y L + +  + G H YEISN
Sbjct: 180 KLEPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLESAGYHHYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW+   Y+G+G   HS  +       I ++++   W     +N    
Sbjct: 240 WAKQGYESRHNLTYWQNRPYLGLGVAGHSFFQNWRTANTIDLDEYLLCW-----QNNSPP 294

Query: 316 VEKEFLSSE--QQADEFLMMGLRLREGISVKDWEMLAG 351
              E ++ +   Q  E +++GLRL +G++ +D E   G
Sbjct: 295 SPSENINVDLANQLAETIILGLRLDKGVTAEDIEARFG 332


>gi|323351663|ref|ZP_08087317.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis VMC66]
 gi|322122149|gb|EFX93875.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis VMC66]
          Length = 376

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 203/374 (54%), Gaps = 17/374 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGG
Sbjct: 8   AYVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYHSYDIKKLRTLYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+
Sbjct: 62  TPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  
Sbjct: 122 FNDHMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDMKINVAKAIALG 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S 
Sbjct: 182 IPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELKKAGFEHYEISNFSK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+A V++
Sbjct: 242 PGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   + + 
Sbjct: 297 EALTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVPDR-NI 355

Query: 376 LRCTQRGMTMLDSV 389
           +R T++G+ + D+V
Sbjct: 356 VRMTKQGLFLGDTV 369


>gi|159903900|ref|YP_001551244.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889076|gb|ABX09290.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9211]
          Length = 415

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 182/346 (52%), Gaps = 32/346 (9%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRS--IS 72
            Y+H PFC ++C YCDF         R         I+S+L  +   R+++  P++  +S
Sbjct: 7   AYLHIPFCHRRCFYCDFPIVPLGDKARGEGAAGSKSIKSYLKLL--FREISLAPQASPLS 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPSL+ P  +  +L  +  ++ +    E+T+E +P+S    + + Y + G+ R
Sbjct: 65  TVYIGGGTPSLLTPNQLGDLLQHLFDHFGLQDGAEVTVEVDPASFNEEDLREYLEIGITR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQW 187
           +SLG QS + ++L  LGR H++S+   +    +  + +      S DLI  LPKQ +  W
Sbjct: 125 LSLGAQSFDNEALSMLGRRHDSSQLFDSCQWIKKAYSQGNLFSWSLDLIQNLPKQNLFTW 184

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E +L++ L  +  HLS+Y L+IE+GT+F      G+L LPS+  A D+ +LT SI    G
Sbjct: 185 EQQLKKLLEISPPHLSIYDLSIEEGTVFAWRQSRGELNLPSDEFAADITSLTSSILQEAG 244

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----RVKVGSHRVAISIEKHPE 302
              YEISN +  G  S HN  YW    + G G GA S     R++    R A       E
Sbjct: 245 YSRYEISNFALPGHTSRHNRVYWSGARWWGFGLGATSCPWGKRLERPKTRAAY------E 298

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQA---DEFLMMGLRLREGISVKD 345
           +WL      G   ++K  L + Q +   DE  ++GLR REGI+ ++
Sbjct: 299 AWLLKQELEG---IDKSLLPTNQSSIDLDELFLVGLRRREGINFEE 341


>gi|240146447|ref|ZP_04745048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseburia intestinalis L1-82]
 gi|257201420|gb|EEU99704.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseburia intestinalis L1-82]
          Length = 409

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 201/394 (51%), Gaps = 34/394 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFCV+KC YCDF S        Q  ++++   E+ +         +S+++ GG
Sbjct: 6   LELYIHIPFCVRKCNYCDFLSFPADEDT-QRQYVKALCKEIFYYGAHCRDYVVSTVYIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+D + KN+ +  + E+++E NP +V    F  YR++G+NRISLG+Q
Sbjct: 65  GTPSWLWESDMAEIMDAVHKNFALLPDAEVSVECNPGTVTAQKFAVYRQSGINRISLGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H   + +    LAR   F  ++ DL+ +LP Q    +   LQ+    
Sbjct: 125 SAQNVELKMLGRIHTWEQFLKTYELARAGGFSNINVDLMSSLPGQHTATYADSLQKVCRL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDL---------VLPSENVAVDLYNLTQSITSAHGL 248
             +H+S Y L IEKGT FY ++K   +          LP+E+   ++  LT+ +   +G 
Sbjct: 185 KPEHISAYSLIIEKGTPFYDLYKFDAVKQRAGMATDALPTEDEVYEMTQLTEQMLKENGY 244

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----------------KVGSHR 292
             YE+SN +  G    HN+ YW   +Y+G+G GA S +                +V   R
Sbjct: 245 VHYEVSNFAQPGYACRHNIGYWTRVNYLGLGLGASSLMENIRYTNTRDLYTYLEQVEVIR 304

Query: 293 VAISIEKHPESWL-KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
             I   KH +  + ++   N HA  E   +    Q +EF+ +GLR+ +G+S  D+    G
Sbjct: 305 EGIWENKHDDGTVEQLPATNLHASAES--VGKYAQMEEFMYLGLRMIDGVSRDDFMHSFG 362

Query: 352 RNLDIECER---NLQRQGFIERVQFSRLRCTQRG 382
             ++   ++   +LQ +  +ER +  R+  T +G
Sbjct: 363 MPIEAVYQKVLNHLQEEELLER-RAGRIYLTPKG 395


>gi|317495800|ref|ZP_07954163.1| HemN protein [Gemella moribillum M424]
 gi|316913977|gb|EFV35460.1| HemN protein [Gemella moribillum M424]
          Length = 377

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 202/369 (54%), Gaps = 16/369 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           GVY+H PFC   C YCDFN  +++R  V  + +I   + E+  M ++   ++I +I+ GG
Sbjct: 7   GVYIHIPFCKYICSYCDFNKFYIQRQPV--DKYIDCLIDEINSMDKV---QNIETIYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  +L  + K        E T EANP  +  +     ++ GV+RIS+GVQ
Sbjct: 62  GTPSALNDEQLHRLLSALRKKIPQQLR-EFTFEANPEDLVDSRVALVKEYGVDRISMGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L+ LGR H A +   AI   +      ++ DL+++LPKQTM    + +Q+ + Y
Sbjct: 121 TFNDELLKILGRGHVAGDVDMAITNCKKYGIKDINVDLMFSLPKQTMEDLFVSMQKVVEY 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E+ T  Y   +D  + LPS      +Y+   +  +A+G + YEISN +
Sbjct: 181 DISHVSCYSLILEQKTKLYNQVRDKKVTLPSNETEEKMYDEVINFLTANGYNQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES+HN +YW   +Y G+G GAH  +    +    +++ + +S L    + GHA  E
Sbjct: 241 RPEHESVHNSSYWENIEYYGLGAGAHGYIDGVRYANQGALKFYIDSML----EKGHARRE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
           +  ++ +++ +E + +GLRL +G+ +  +E   G+  +   +  + +    G++E +  +
Sbjct: 297 EHTVTDKEKIEEEMFLGLRLLKGVDLNTFEEKYGKRAEKIFKEVIDKNIKIGYLE-IDDN 355

Query: 375 RLRCTQRGM 383
           +LR T++G+
Sbjct: 356 KLRLTRKGL 364


>gi|299822877|ref|ZP_07054763.1| coproporphyrinogen dehydrogenase [Listeria grayi DSM 20601]
 gi|299816406|gb|EFI83644.1| coproporphyrinogen dehydrogenase [Listeria grayi DSM 20601]
          Length = 375

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 174/339 (51%), Gaps = 12/339 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +        I ++F GG
Sbjct: 4   VYIHIPFCEHICYYCDFN---KVFLEGQPVDRYVDLLIREMEMVTGKQELEPIDTVFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +A +   I +   +  N E + EANP  + +   Q  +  GVNRIS+GVQ
Sbjct: 61  GTPTTLNEKQLARLCTAIHRLLPLRENAEFSFEANPGDLSLEKIQVLKDHGVNRISMGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L+ +GR H   +   ++   R I    +S DLI++LP QT   ++  L +AL  
Sbjct: 121 SFNNELLKKIGRIHTTKDVYQSVDNLRKIGLDNVSIDLIFSLPTQTFADFKDTLTQALDL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L IE  T+FY + + G L+LP + +  ++Y+   +    HG   YEISN +
Sbjct: 181 DLPHYSAYSLIIEPKTIFYNLMQKGQLILPKQEIEANMYDTLMNEMEKHGRRQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH-AVV 316
             G ES HN+ YW    Y G G GAH  +    +     I+K+ E       +NG   V 
Sbjct: 241 KPGFESRHNIVYWSNEHYYGFGAGAHGYLGEQRYSNFGPIKKYMEPL-----ENGELPVF 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   L  +++ +E + +GLR  +G+S   +    G+NL+
Sbjct: 296 QSRVLPLQEKMEEEMFLGLRKVDGVSKAHFLQKFGQNLN 334


>gi|223985720|ref|ZP_03635767.1| hypothetical protein HOLDEFILI_03073 [Holdemania filiformis DSM
           12042]
 gi|223962331|gb|EEF66796.1| hypothetical protein HOLDEFILI_03073 [Holdemania filiformis DSM
           12042]
          Length = 370

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/375 (34%), Positives = 197/375 (52%), Gaps = 24/375 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDF + VR +    + +++    E++      G   + +++ GGG
Sbjct: 11  ALYVHIPFCQGICAYCDF-TRVRYHTGLADQYLKQLARELEERVPCQG---METVYIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P  +  +LD +     +    E+TIEANP ++     +     G+NRISLG+QS
Sbjct: 67  TPTALSPDQLWRLLDLLQP--YLQGAAEVTIEANPEAINAELIEILLNGGINRISLGLQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H  ++A  A+ L +      +S DLIY+LP QT TQWE  LQ  LS  
Sbjct: 125 CDDEILKQIGRRHTFAQARQAVRLLQQAGLTNISCDLIYSLPHQTRTQWEKTLQDVLSLN 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY LTIE+ + F    + G   L  +  A   +   + +T A G   YEISN + 
Sbjct: 185 IPHCSLYALTIEEHSEF---GRTGQRPLDEDTEASMYFEAVRVLTEA-GYQHYEISNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HNL+YW Y D+ G+G GA    K+ S R   +  ++ + + K     GH + E 
Sbjct: 241 PGYASRHNLHYWNYDDFYGVGLGASG--KLSSFRYDNT--RNFQEYFK-----GHWIGET 291

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             LS   Q  E +MM LR   G+S+ D+E   G  L       +Q   RQG++ R+   R
Sbjct: 292 IELSRRDQMFERVMMNLRTARGVSLADFEQKFGLPLSEVYPDAVQKGIRQGWL-RMTEDR 350

Query: 376 LRCTQRGMTMLDSVI 390
           L  T+ GM +L++V+
Sbjct: 351 LAPTEAGMALLNTVL 365


>gi|196039180|ref|ZP_03106486.1| coproporphyrinogen dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196029807|gb|EDX68408.1| coproporphyrinogen dehydrogenase [Bacillus cereus NVH0597-99]
          Length = 378

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 185/383 (48%), Gaps = 15/383 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIERVQ 372
           +   ++ +++ +E L +GLR  +G+S     K + M   +    + + N Q QG +E   
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMNQVFAKQLQNN-QEQGLLEESD 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +R T++G  + + V  +  +
Sbjct: 356 -GYVRLTRKGKLLGNEVFQSFLI 377


>gi|218905454|ref|YP_002453288.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH820]
 gi|218536984|gb|ACK89382.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH820]
          Length = 378

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 187/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVSFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 351

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 352 EESD-GYVRLTRKGKLLGNEVFQSFLI 377


>gi|294786880|ref|ZP_06752134.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parascardovia denticolens F0305]
 gi|315226516|ref|ZP_07868304.1| coproporphyrinogen dehydrogenase [Parascardovia denticolens DSM
           10105]
 gi|294485713|gb|EFG33347.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parascardovia denticolens F0305]
 gi|315120648|gb|EFT83780.1| coproporphyrinogen dehydrogenase [Parascardovia denticolens DSM
           10105]
          Length = 417

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 170/345 (49%), Gaps = 15/345 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VY+H PFC+++C YCDFN++      G   + N+    + EM   RQ    + I     S
Sbjct: 4   VYIHVPFCIRRCGYCDFNTYTSPDLGGGASRGNYANLAVREMVLARQWQESQGIEEPAAS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IFFGGGTP+++   ++  ++D +   W +    EIT EANP +V+       +  G  R
Sbjct: 64  TIFFGGGTPTILAAHDLIRMVDAVRAVWGIEPEAEITTEANPDTVDHAYLAELKAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L  L R H  +   + +  A+ +    S DLIY  P +++  W+  L+
Sbjct: 124 VSFGMQSAVPSVLATLDRTHTPANVESGVKAAQALGLETSVDLIYGTPGESIQDWDKSLR 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+     H+S Y LT+E  T   +    G +  P ++     Y       +  GL  YE
Sbjct: 184 AAIDLGTGHISAYALTVEPHTRMGRQISRGIIAAPDDDDQAAKYRAADQAFTQAGLDWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-------KHPESWL 305
           +SN +  G ES HNL YW   D++GIGPGAHS  + G    A            HP  W 
Sbjct: 244 VSNWARPGHESRHNLGYWHNVDWVGIGPGAHSHYRRGKASAAAEASGLRAWDIAHPRKWA 303

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           +++ +        E L  +++ +E +++GLR+R+G+ +   + LA
Sbjct: 304 EVMEEGRLPWQGSESLGWKEKMEEAIILGLRIRDGLDLARLDRLA 348


>gi|168333686|ref|ZP_02691941.1| coproporphyrinogen III oxidase [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 374

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 187/338 (55%), Gaps = 10/338 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
           G+YVH PFC  KC YCDF S        ++ ++ + + E++ + R++   R I++IF GG
Sbjct: 4   GLYVHIPFCQSKCYYCDFLSIADNSL--EDVYVSALVEELKRYSRKV--KRKINTIFIGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I + I  N+ +  ++E TIE NP ++  ++ Q  +   +NR+SLG+Q
Sbjct: 60  GTPTALSVNLLSKICEVIEDNFILDKDIEWTIEVNPGTLTKSHLQIIKNTSINRVSLGLQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ +GR H   +    I+    I    ++ DL++ALP QT+  W+  L R   Y
Sbjct: 120 SSCNNLLKKIGRIHTFEDWENTINDLLGIGITNINTDLMFALPSQTLHDWKCTLARVSQY 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +EK T  Y  +K+G  ++ SE+V   +Y   + I S++G   YEISN +
Sbjct: 180 PITHISAYALILEKNTKLYNDYKNGLFLITSEDVDRQMYATAKEILSSYGFFQYEISNWA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HN+ YW   +YIG+G GA   +    + +  +     + +++ +      + E
Sbjct: 240 KNGYKCKHNILYWTLDEYIGVGLGASGYL----NNIRYTNTDDLKKYIQGIDHGTDIIKE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           ++ ++++   +EF+ +GLR+  GI  KD++   G+N++
Sbjct: 296 EDVITNKMSMEEFMFLGLRMIRGICKKDFKNRYGKNIE 333


>gi|55980466|ref|YP_143763.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           thermophilus HB8]
 gi|55771879|dbj|BAD70320.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           thermophilus HB8]
          Length = 365

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 190/383 (49%), Gaps = 35/383 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC   CPYCDF+  VRR     E +++    E Q + +   P+ + +++ GGGT
Sbjct: 4   LYVHVPFCPTLCPYCDFHV-VRRGPGWVEAYLRRLKEEAQALHERF-PKPLRTLYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  + +  +   +   W ++   E+T+EANP ++     +  +  GVNR+SLGVQS 
Sbjct: 62  PSYLRDRELVALFQSLP--WALAEGAEVTLEANPGTLSPGRLRLLQDLGVNRLSLGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +E  L+FLGR H    A+ A+ +A     R+S DLI  LP Q +   E +L+ A    V 
Sbjct: 120 QELVLKFLGRAHGRKGALRAVEMALEWGFRVSIDLILGLPMQDV---EADLKEAARLGVG 176

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +EKGT F  +    D     E  A  +    + +    GL  YE+SN +  G
Sbjct: 177 HVSAYTLQVEKGTPFALLGLKED----PEREAWAMER-AEEVLGETGLFRYEVSNFAREG 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEKE 319
            E+ HNL YWR G ++ +GP A  +        A+     P   WL+     G A  E E
Sbjct: 232 EEARHNLVYWRAGFWLALGPAATGQYPGEGGAYALRRTAPPLPRWLR-----GEAPKE-E 285

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWE---------MLAGRNLDIECERNLQRQGFIER 370
            +S  + A E LM+GLRLREG+ V   E         +L GR +++  E  LQ  G    
Sbjct: 286 AISPLEHAKESLMLGLRLREGVDVGAVEERTGLALFPLLQGRAVELAQEGLLQVLG---- 341

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
               RL  T +   +L  V+  L
Sbjct: 342 ---KRLLPTPKAFPLLHRVVLAL 361


>gi|313680477|ref|YP_004058216.1| coproporphyrinogen III oxidase, anaerobic [Oceanithermus profundus
           DSM 14977]
 gi|313153192|gb|ADR37043.1| coproporphyrinogen III oxidase, anaerobic [Oceanithermus profundus
           DSM 14977]
          Length = 377

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 27/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   CPYCDF  HV R   G        L           P ++++++ GGGT
Sbjct: 4   LYLHVPFCPTICPYCDF--HVVRRGPGLVERYLERLAAEAAALHAQRPGTLATLYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  + +A +    A  W ++   E+T+EANP ++     +  R  GVNR+SLGVQS 
Sbjct: 62  PSYLRDRELARLF--AALPWALAPGAEVTLEANPGTLSPARLERLRTLGVNRLSLGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++  L  LGR H A  A+ A+  A +   R+S DLI  LP Q +     +L+ A +  V 
Sbjct: 120 QDPVLARLGRAHKARGALRAVEEALDAGFRVSVDLILGLPGQDV---RADLETAAALGVG 176

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E GT F  +  + D   P    A   + L +++    GL  YE+SN +  G
Sbjct: 177 HVSAYTLQVEPGTPFALVGLEPD---PDREAAA--FALARTVLGRAGLARYEVSNFARPG 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            E+ HNL YWR  ++ G+GP A +     +         +P     + R        +E 
Sbjct: 232 EEARHNLAYWRMAEWGGLGPAASAHFYTHAGPGVAERRTNP----PLPRWAAGEPPARET 287

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-------NLQRQGFIERVQF 373
           +   + A E LMMGLRLREG+   D   LA R+   + ER        L+ +G +ER + 
Sbjct: 288 IGPLEHAKEGLMMGLRLREGV---DLAALARRSGLADLERVLAPAIERLEAEGLLERTE- 343

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           S+LR ++ G+  L + +  L
Sbjct: 344 SQLRPSEAGLDRLHAALLPL 363


>gi|329946957|ref|ZP_08294369.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328526768|gb|EGF53781.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 411

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 184/393 (46%), Gaps = 25/393 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGP-----RSI 71
           VY+H P+C  +C YCDFN++     +GQ    ++F+ +   E++  R          R  
Sbjct: 22  VYLHVPYCRVRCGYCDFNTYTN-LTMGQGASAKDFVGTLAGELRAARSAMDSAGLPVRPA 80

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTP+++   ++  +LD + + + ++ + E+T EANP SV+        + G  
Sbjct: 81  QTVFVGGGTPTMLPASDLVTMLDLVRECFGLAPDAEVTTEANPDSVDEAGLAALAEGGFT 140

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +     +  AR      S DLIY  P +++  W+  L
Sbjct: 141 RVSFGMQSAVPHVLKVLERTHEPARVPRVVDWARRAGLSTSLDLIYGAPGESLEDWQRSL 200

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   DH+S+Y L IE+GT  +   + G+L +P ++     Y +  +     G   Y
Sbjct: 201 DAVTQIGPDHVSVYALVIEEGTRMWSQVRRGELPMPEDDDEATKYEMADASLRQAGYEWY 260

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  GAE  HN  YW   D+ G GPGAHS +      V +   KHP +W   +   
Sbjct: 261 EISNWARPGAECRHNQAYWLDWDWWGGGPGAHSHLG----DVRLWNTKHPVAWAGQISTG 316

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---------IECERNL 362
              V   E + +  +  E +M+ +RLREGI++      +   LD         +     L
Sbjct: 317 HLPVAGHEVIDAGSRELERIMLSIRLREGIALASLSGPSDGPLDDVGATPSHLVPVVAGL 376

Query: 363 QRQGFIERVQFSRLRC--TQRGMTMLDSVIANL 393
              G ++    S+ R   T RG  M D+V   L
Sbjct: 377 VADGLLDDGAASKGRAVLTLRGRLMADTVTRAL 409


>gi|156743246|ref|YP_001433375.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus castenholzii DSM 13941]
 gi|156234574|gb|ABU59357.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus castenholzii DSM 13941]
          Length = 423

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 188/392 (47%), Gaps = 40/392 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS------- 72
           +Y+H PFC ++C YCDFN++    +   E ++ +   E+   R L  P R+IS       
Sbjct: 30  LYIHIPFCHRRCAYCDFNTYAN-MEDRMEAYVATLCAEL---RSLAHPQRTISPALPLTA 85

Query: 73  ---------SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF- 122
                    +IF GGGTPS++ P+ +       A         E+T+E NP +V   ++ 
Sbjct: 86  DLTRAMLRPTIFLGGGTPSML-PEALMERTLAAADGVIPLREAEVTVECNPGTVLRRDYL 144

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R  GVNRISLGVQSL + +LR LGR H A+EA A+ + AR   F  ++ D I+ LP 
Sbjct: 145 RALRAMGVNRISLGVQSLHDPTLRVLGRIHTAAEAYASFNDARAAGFKSINLDFIFGLPG 204

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+ QWE  L+  +S+  DH +LY L +E+ T  Y     G + +P ++    +Y L   
Sbjct: 205 QTIAQWEETLREIVSWGADHFALYSLILEERTPLYAQVSSGRVCVPDDDATGAMYELATE 264

Query: 242 ITSAHGLHAYEISNHSFLGAESL--------HNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
             +  G   YEISN +     +         HNL YW   DY+  G GAH  +    +  
Sbjct: 265 HFAVAGYVQYEISNWARSDDPAAPVPSHACHHNLAYWLNADYLAAGAGAHGHLYPHRYVD 324

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I+     ++  VR     V E   L+    A E + MGLRL  G+S   +    G  
Sbjct: 325 VAGIDD----YITRVRAGNLPVAEVIDLTPRDLAAETIFMGLRLNAGVSFAHFRDRCGVE 380

Query: 354 LDIECER---NLQRQGFIERVQFSRLRCTQRG 382
           +D        +L  QG IER +   +R T RG
Sbjct: 381 MDAIFGAELGDLAEQGLIERTERG-VRLTDRG 411


>gi|116073337|ref|ZP_01470599.1| hypothetical protein RS9916_32842 [Synechococcus sp. RS9916]
 gi|116068642|gb|EAU74394.1| hypothetical protein RS9916_32842 [Synechococcus sp. RS9916]
          Length = 444

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 186/366 (50%), Gaps = 16/366 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMR 63
           +   GQ S     YVH PFC ++C YCDF       H           I+++L+++    
Sbjct: 19  DGWPGQMSAPRSAYVHIPFCHRRCFYCDFAVVPLGDHAGTPSGTGSGSIRTYLSQLHKEI 78

Query: 64  QLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            L   GP  +++++ GGGTPSL+ P  I  +L+ + + +   +  EIT+E +P+S ++++
Sbjct: 79  ALAPKGP-PLATLYIGGGTPSLLTPIQIRDLLEALRRQFGFQAGAEITLEMDPASFDLSD 137

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-----IFPRMSFDLI 176
            Q   KAGVNR+SLG QS +++ L  LGR H   +        R+          S DLI
Sbjct: 138 LQALIKAGVNRVSLGGQSFDDRVLEGLGRRHRRGDLQKCCRWLRDGLRDGALRSWSLDLI 197

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
             LP+QT+  W  +L+ AL+    HLS+Y L +E GT+F    + G+L LP +++AV L 
Sbjct: 198 RNLPEQTLEAWSAQLELALTTGAPHLSIYDLAVEPGTVFAWRQQRGELPLPDDDLAVALM 257

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
             T       G   YEISN++  G  S HN  YW    + G G GA S    G       
Sbjct: 258 TSTSDRLGRAGFCRYEISNYAQPGHASRHNRVYWSGAGWWGFGMGATS-APWGERLARPR 316

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +   SWL+  ++  H  ++   +++    D+ L++GLR REG+ ++      G + D 
Sbjct: 317 TREGYASWLEEQQRGLHPSLQHS-MAAALPLDDRLLVGLRRREGVQLRQQARSCGWS-DA 374

Query: 357 ECERNL 362
            C+++L
Sbjct: 375 CCDQHL 380


>gi|315926093|ref|ZP_07922293.1| coproporphyrinogen III oxidase, anaerobic [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315620537|gb|EFV00518.1| coproporphyrinogen III oxidase, anaerobic [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 390

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 192/382 (50%), Gaps = 13/382 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +GVYVH PFCV+KC YCDF S  R        +  + + E++        R ++S++ GG
Sbjct: 8   IGVYVHIPFCVQKCRYCDFCSS-RENAAAIGRYFDALVAEIRADAAAAD-RRVASLYVGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVS---SNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GTPS ++   IA ++  +   +  S   +++E TIE NP+S   +    YR+ G NR+S+
Sbjct: 66  GTPSFVDAAQIARVVAALEARYAFSLRDADIEATIEVNPASAMADKLAAYRRMGFNRLSV 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G QS +++ L  +GR H A++  A +  A+   F  +S D+I+ LP+Q +      ++  
Sbjct: 126 GCQSTDDRLLALMGRAHRAADFFATVDAAKAAGFENISADVIFGLPEQHLADVAATMRDL 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLS Y L +E GT+F +  ++G L LP E+    +Y   + + +  G+  YEI+
Sbjct: 186 LVLPLTHLSAYSLIVEPGTVFDRWEREGRLALPPEDEERAMYETVRRMAADAGMAPYEIA 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR---KN 311
           N +  G  S HN  YW +  Y G G GA S V+  +  +     +   +   +       
Sbjct: 246 NFARPGYASRHNSRYWSFEPYRGYGLGAASFVRPAALPLGDGDCRRFANTSDLAAYGLAP 305

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFI 368
           G A+ E   L   +   +F+ +GLR   G+    ++ L G +   E       L+RQG +
Sbjct: 306 GRALAEDHRLFLAEAKGDFMFLGLRRTAGVRDAVFQKLFGASFFEEYGAAIAGLRRQGLV 365

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
           E V    LR ++RG  + + V 
Sbjct: 366 E-VAGDALRLSRRGYDLANQVF 386


>gi|126657581|ref|ZP_01728736.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
 gi|126621037|gb|EAZ91751.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
          Length = 408

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 171/334 (51%), Gaps = 11/334 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC ++C YCDF   V   K           + Q    E++       P  + 
Sbjct: 3   ISAYLHIPFCRRRCYYCDFPISVLGDKTNTNQSGSIVEYAQFLCEEIKITPTCHLP--LE 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTPSL+ P+ +  IL  + +++ + +N EI+IE +P +  +     Y+K GVNR
Sbjct: 61  TVFFGGGTPSLLPPRYLEKILLTLDEHFGIDANAEISIEMDPGTFTLEQLHDYKKLGVNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            S+GVQS  ++ L   GR H   +    I+ + +      S DLI  LP QT+  WE+ L
Sbjct: 121 FSVGVQSFNDKLLEKCGRFHRLKDIEQTINFIYQTNIKNFSLDLISGLPYQTLETWELSL 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++A++    H+S Y L +E  T F K +K G+  LP +     +Y +TQ   +  G   Y
Sbjct: 181 EQAITINPSHISCYDLVLEPVTAFGKQYKPGNFPLPDDEDTSKMYKITQQKLTKAGYEHY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++ LG +  HNL YW    Y G G GA S              K    W+K ++ +
Sbjct: 241 EISNYAKLGYQCRHNLFYWENKPYYGFGMGAASYTN-NQRFTRPKTRKTYYEWVKQLKLS 299

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           G+ V+    LS      E LM+GLRL++GI++ +
Sbjct: 300 GY-VISASNLSRVDILLETLMLGLRLKKGINLSE 332


>gi|332366651|gb|EGJ44394.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1059]
          Length = 376

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 203/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYNSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSACQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQGKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V   G+A V++E
Sbjct: 243 GFESRHNLMYWNNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLQAVEA-GNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   + + +
Sbjct: 298 VLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVPDR-NIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|239906448|ref|YP_002953189.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           magneticus RS-1]
 gi|239796314|dbj|BAH75303.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           magneticus RS-1]
          Length = 375

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 190/378 (50%), Gaps = 12/378 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC F S  R   + + E +  +   E++   +  G   + +I+FGGG
Sbjct: 3   LYIHVPFCRSKCRYCAFVS--RPLDMAEVEVYATALPLEIRHFGKKLGRPKVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+L+ P  ++ IL  I +++ V   VE T E NP S+++         AGVNR+SLGVQ
Sbjct: 61  TPTLLPPWALSRILPEITRHFDVHPAVEWTFEGNPDSALDQQYLSILVGAGVNRLSLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ LGR H+A  A  A   AR   F  +S DLI+ LP Q    W  +L+ A+  
Sbjct: 121 SFSDAMLKTLGRPHDARTAQLAFEAARKAGFANISLDLIWGLPGQREASWMEDLKAAVRL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS Y LT+E GT      + G+L LP +     +Y          G   YEISN++
Sbjct: 181 RPEHLSCYGLTLEPGTPLAASAEAGELELPPDGEQGRMYVHGAEFLEEQGYLQYEISNYA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +G +S HN  YW   DY+G+GPGA S V    H     +      W  +  K G   V 
Sbjct: 241 RMGFQSRHNSGYWEGRDYLGLGPGAVSTVAGVRHENPRDV----RDW-AVQAKVGRCGVG 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQFSR 375
              LS E++  E +M+ LR  +G+ +  ++ L G +   E E  +   RQ  + R+    
Sbjct: 296 GVALSREERIRELVMLSLRTAKGLRLGLYKRLTGIDFLKENEALVTALRQKELVRLSAGH 355

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G  + + ++  L
Sbjct: 356 LRLTKNGFLVSNLILERL 373


>gi|57867040|ref|YP_188727.1| coproporphyrinogen III oxidase [Staphylococcus epidermidis RP62A]
 gi|251811000|ref|ZP_04825473.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875991|ref|ZP_06284858.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus epidermidis SK135]
 gi|293366456|ref|ZP_06613133.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|57637698|gb|AAW54486.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Staphylococcus epidermidis RP62A]
 gi|251805510|gb|EES58167.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295016|gb|EFA87543.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus epidermidis SK135]
 gi|291319225|gb|EFE59594.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329725327|gb|EGG61810.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU144]
 gi|329735227|gb|EGG71519.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU045]
          Length = 374

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 198/379 (52%), Gaps = 18/379 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N    Y+H PFC + C YCDFN +    K   + ++ + ++EMQ    +   R + +++ 
Sbjct: 2   NVKSAYIHIPFCYRICTYCDFNKYFID-KQPVDEYLDALISEMQ----VKNNRDLETMYV 56

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +  + +  +L  I + +T+S   E + EANP  +        ++ GVNRIS+G
Sbjct: 57  GGGTPTALNMRQLEKLLRAINQTFTISG--EFSFEANPDELTYEKVALLKQYGVNRISMG 114

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA+
Sbjct: 115 VQTFKPELLKILGRTHKTEDIYDAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAI 174

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  +DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN
Sbjct: 175 ALDIDHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYRFLMERMKNSPFHQYEISN 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
              L  ES HN  YW   +Y G G GA   V  G     ++   H   ++K + +    +
Sbjct: 235 FGKLNHESNHNKVYWLNEEYYGFGAGASGYVN-GVRYTNLNPVNH---YIKAINEGKKPI 290

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI-ERV 371
           + +   +  ++ +E + +GLR+ +G+S   ++    + +D    E  ++L+ +G I E  
Sbjct: 291 LSETSPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFGETIKDLRCRGLIKEEG 350

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +F  L  T+RG  + + V 
Sbjct: 351 EFISL--TERGKVIGNEVF 367


>gi|332360718|gb|EGJ38527.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK49]
          Length = 376

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 203/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGVGAGASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGVSFEDQYGAVVAELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|229163262|ref|ZP_04291217.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus R309803]
 gi|228620325|gb|EEK77196.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus R309803]
          Length = 378

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEQEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 297 DVHAVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNVEMDQVFSKQLQSNQEQGLLEESD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 356 GYVRLTRKGKLLGNEVFQSFLI 377


>gi|146299136|ref|YP_001193727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Flavobacterium johnsoniae UW101]
 gi|146153554|gb|ABQ04408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Flavobacterium johnsoniae UW101]
          Length = 384

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 197/388 (50%), Gaps = 27/388 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ---LTGPRS----IS 72
           G+Y+H PFC + C YCDF  H       +++ + +   E+  MR+   L   RS    + 
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMKKKDDMVLALAKEIG-MRKNELLDSARSDNEIVE 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+FGGGTPS++    I  ++  + KN+ V  N EIT+EANP  + V       K+ +NR
Sbjct: 60  TIYFGGGTPSVLSNDEINFLISEVYKNYKVVENPEITLEANPDDLSVERILELSKSPINR 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+G+QS  E+ L+ + R HN++EA   +  A   F  +S DLIY +P  +   W+  +Q
Sbjct: 120 LSIGIQSFYEEDLKMMNRAHNSAEAKKCLEEATKYFDNISLDLIYGIPGMSDEMWKQNIQ 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL + + H+S Y LT+E  T   K+ + G +  P +    + + +   +   +G   YE
Sbjct: 180 TALDFGIPHISSYALTVEPKTALSKLIQTGKIAEPQDEATSNHFTILVEMLQKNGFVHYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR--VKVGSHRVAISIEKHPESWLKMVRK 310
           +SN       S +N  YW    YIGIGP AHS    K G +    S+      +LK ++ 
Sbjct: 240 LSNFGKEDYFSKNNSAYWLGKKYIGIGPSAHSYDGEKRGWNIANNSL------YLKAIQ- 292

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECERNLQRQGFIE 369
           N    +E E L+   + +E++M GLR   G+S+   E   G   L+   E   Q Q F+ 
Sbjct: 293 NDELPIETETLTISDRYNEYIMTGLRTIWGVSLNRIEQEFGSEYLNYLLE---QSQKFLN 349

Query: 370 ----RVQFSRLRCTQRGMTMLDSVIANL 393
                ++ + L+ T +G  + D + ++L
Sbjct: 350 DDLLSIENNILKPTLKGKFLTDGIASDL 377


>gi|194324372|ref|ZP_03058145.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. novicida FTE]
 gi|208780216|ref|ZP_03247558.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella novicida FTG]
 gi|194321437|gb|EDX18922.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. novicida FTE]
 gi|208743865|gb|EDZ90167.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella novicida FTG]
          Length = 363

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 21/371 (5%)

Query: 29  VKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           ++KCPYCDFNSH ++      E + Q  + +          R + SIF GGGTPSL + +
Sbjct: 1   MRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIGGGTPSLFKAE 60

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGVQS ++  L+ 
Sbjct: 61  YLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRISLGVQSFQDDKLKI 120

Query: 148 LGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           LGR HN       I   +N      + D+++ LP Q+      ++ +A++    H+S YQ
Sbjct: 121 LGRIHNYENIYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIAMQPTHISWYQ 180

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHN 266
           LTIE  TLF          LP E +   +    +   +  G   YE+S  +     S+HN
Sbjct: 181 LTIEPNTLFAAKPPK----LPDEEILESIEIAGKEALAHAGFKQYEVSAFAKNTLRSIHN 236

Query: 267 LNYWRYGDYIGIGPGAHSRV-KVGSHRVA-ISIEKHPESWLKMVR--KNGHAVVEKEFLS 322
            NYW +GDYIGIG GAHS++  + + ++  +   KHP+ + +  +  K+ + V + E + 
Sbjct: 237 SNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQTDKFIKDSNIVTQDEIIY 296

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCT 379
                 EF++  LRL+ G  + ++E     + +I  ++ LQ    +G +E +  ++++ T
Sbjct: 297 ------EFMLNTLRLKNGFKLSEFEQQTFLSSNIISQK-LQLGIDKGLLE-LNANQIKPT 348

Query: 380 QRGMTMLDSVI 390
            +G   L+  I
Sbjct: 349 AKGYLFLNDCI 359


>gi|315654881|ref|ZP_07907786.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 51333]
 gi|315490842|gb|EFU80462.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 51333]
          Length = 469

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 161/342 (47%), Gaps = 39/342 (11%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQ-WMRQLTGP------- 68
           +L  YVH P+C+++C YCDFN++       G   +  + L E+  + R  +G        
Sbjct: 6   TLSAYVHVPYCLRRCGYCDFNTYSNLSLGPGVGGYAAALLREIGLYARDCSGAVAVCPDG 65

Query: 69  --------------------------RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
                                     R+++S+FFGGGTP+++   ++  +L G+ + + +
Sbjct: 66  GHKGGGHEGGAGVVGAGGTGAGRQDGRALTSVFFGGGTPTVLPATDLVRVLRGLNQTFGL 125

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
             + E+T EANP +V   +       G  R+S G+QS     L  L R H     +A + 
Sbjct: 126 EPDAEVTTEANPDTVTPEDLDTLVAGGFTRVSFGMQSAVPAVLATLNRTHQQKHLVAGVQ 185

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            A +    +S DLIY  P +T+  W   L  AL   VDH+S Y L IE GT   +    G
Sbjct: 186 AAHSRGLEVSVDLIYGTPGETLADWRASLDAALELGVDHVSCYALVIEPGTALGRALAQG 245

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           D+     +   D Y L   + SA GL  YEISN +  G E  HNL YWR  D+ G GPGA
Sbjct: 246 DIPPVDPDDQADKYELADEVLSAAGLQWYEISNWALPGHECRHNLAYWRDQDWYGFGPGA 305

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
           HS   +GS R      +HP  W++ V+     V  +E ++ +
Sbjct: 306 HSH--LGSTR--FWNLRHPAKWMQSVQSGRRPVDGQEIVTGD 343


>gi|255994711|ref|ZP_05427846.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium saphenum ATCC 49989]
 gi|255993424|gb|EEU03513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium saphenum ATCC 49989]
          Length = 414

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 205/412 (49%), Gaps = 43/412 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIF 75
           ++LGVY H PFCV+KC YCDF S     +V ++++ ++   E+ + +++L G   I S+F
Sbjct: 4   STLGVYAHVPFCVQKCSYCDFLSFDNSPQV-EDDYFKALYRELTFSLKRLAGSYEIDSVF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP++  P+ I  + D  A+   +S + E+TIEANP ++     + Y   G+NRISL
Sbjct: 63  IGGGTPTVANPKYIEGLFDLFARFGNMSEDAEVTIEANPETLSRQKLKAYESYGINRISL 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS + + L  LGR +   +   A+ L A      ++ DLI+  P   +++    +++A
Sbjct: 123 GVQSFDHKELDTLGRFYTKDQPQKALDLIASGNIDNINIDLIFGFPGNNLSKLLQGIKQA 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +    H+SLY L +  GT      +   LV+PS+     +Y   +    A G H YEIS
Sbjct: 183 ANSGAKHISLYSLELASGTAISNKVEKNILVMPSDEENRRMYEAAREELDALGFHQYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS--------RVKVGSHRVAISIEKHPESWLK 306
           N +       HN+ YWRY  Y+G+G G  S        R+ V    V +    + +  LK
Sbjct: 243 NFAKKQFACKHNIKYWRYKPYLGVGLGVSSFLSKNDAIRLGVVRDEVRLVHALNKQGLLK 302

Query: 307 --MVRKNGHAVV------------------EKEFLSSEQQA--DEFLMMGLRLREGISVK 344
              + + G+  V                  ++E + ++ +A   +F++ GLR++EG+ + 
Sbjct: 303 ADALERKGYPGVRFKNTDDMNSYILEGFTKKQEVIQNDIKAGFSDFMITGLRMKEGVDLS 362

Query: 345 DWEMLAGRNLDIECERNLQRQGFIER------VQFSRLRCTQRGMTMLDSVI 390
             + + G    ++   +++  GFI+R          RL  T  GM + + V+
Sbjct: 363 VAKSVFG----VDLASDIRTCGFIKRGLLVLDGDCGRLALTDLGMDLANRVL 410


>gi|169334997|ref|ZP_02862190.1| hypothetical protein ANASTE_01403 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257735|gb|EDS71701.1| hypothetical protein ANASTE_01403 [Anaerofustis stercorihominis DSM
           17244]
          Length = 376

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 203/381 (53%), Gaps = 15/381 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N++ +YVH PFC  KC YCDF S      +  E + +S   E+   +     R IS+++F
Sbjct: 2   NNISIYVHTPFCKHKCYYCDFASFANNEDLINE-YYKSLKKEIILRKDEINSREISTVYF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++ + I  I+D +   + ++ + EITIEANP S+     + Y+ AG NRIS+G
Sbjct: 61  GGGTPSYVDSKYIVDIMDILKSEFNINKDAEITIEANPESITDEKLENYKIAGFNRISMG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS    +L+ +GR H   + +++  L ++  F  ++ DL+++LP +T+  +   L+  +
Sbjct: 121 LQSANNDTLKKIGRIHTYEKFLSSYELCKSAGFDNINVDLMFSLPNETLNDFIDSLEEVI 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +  H+S Y L +E+GT  Y  ++  ++++  + +   +Y+   +    +    YEISN
Sbjct: 181 MISPSHISTYSLILEEGTKLYDNYRKNNIII-DDTLDRKMYHYCINKLKEYDYEQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN++ W + DYIG G  A       ++ +  + + + + ++  +  +   +
Sbjct: 240 FAKKGYESRHNMSCWDFEDYIGFGSNASG----FNNNIRKTNKSNIKDYINDLNNDTLPI 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECERNLQRQGFIER 370
           +EK  L+ +    E++M+GLR  +GI +   ++    N+D      +   NL+    +  
Sbjct: 296 MEKTQLNIKDLIGEYIMLGLRKIKGIDID--KINKKFNIDFTDTYKDKIENLKNHNLV-T 352

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
           ++ +  R T +G+   ++V+ 
Sbjct: 353 IEDNHFRLTYKGLDFANTVMV 373


>gi|284990170|ref|YP_003408724.1| oxygen-independent coproporphyrinogen III oxidase [Geodermatophilus
           obscurus DSM 43160]
 gi|284063415|gb|ADB74353.1| oxygen-independent coproporphyrinogen III oxidase [Geodermatophilus
           obscurus DSM 43160]
          Length = 406

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 175/338 (51%), Gaps = 11/338 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQLTGPR 69
           G      G+YVH PFC  +C YCDFN++          +  +  + + E++   +  GP 
Sbjct: 24  GLARTPFGLYVHVPFCATRCGYCDFNTYTADELGPGASRAEYAGTAIAELRQAAETLGPD 83

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             ++S++F GGGTP+L+   ++A +L  + + + V+  VE+T EANP +V   +    R 
Sbjct: 84  LPTVSTVFVGGGTPTLLAADDLAAVLAEVRRLFPVTPGVEVTTEANPETVTPASLATLRA 143

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  RISLG+QS  E  L  L R H    A+ A   AR   F  ++ DLIY  P +T   
Sbjct: 144 AGFTRISLGMQSAAEHVLAVLDRRHTPGRAVEAAREARAAGFEHVNLDLIYGTPGETDAD 203

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L   L+  VDH+S Y L +E+GT   +    G+L +P ++V  D Y    +   A 
Sbjct: 204 WSASLDAVLAAPVDHVSAYALIVEEGTRLARRIDRGELPMPDDDVLADRYEQADATLRAA 263

Query: 247 GLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G   YE+SN +    A   HN  YW   ++ G+GPGAHS   VG  R      KHP ++ 
Sbjct: 264 GFDWYEVSNWARGEAARCRHNELYWANANWWGVGPGAHS--HVGGLR--WWNVKHPAAYA 319

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
             + +    V + E L  + +A E +M+GLRLREG+ +
Sbjct: 320 GRLLRGESPVQDTELLDDDDRALETVMLGLRLREGLPL 357


>gi|152976747|ref|YP_001376264.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152025499|gb|ABS23269.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cytotoxicus NVH 391-98]
          Length = 378

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 168/339 (49%), Gaps = 9/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q    + + +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIVNTVQKAPFKQMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMKQTKKLLDIINRRLRPFAPNCEVTFEANPGDLPKEKLNLLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L+ +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLKKIGRKHTREDAFVAIREAQEVGFTNINIDLIYALPGQTIEDVKETLNIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E     +Y +       HG H YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEAKMYEMVMDEMEKHGYHQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YW    Y G G GAHS +  G     +   K    +   + + G   +
Sbjct: 241 AKEGHESRHNLTYWNNEAYYGFGAGAHSYIN-GERIQNVGPLK---QYFAKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   ++ +++ +E L +GLR  +G+  K ++   G  ++
Sbjct: 297 DVHQVTEKERMEEELFLGLRKTKGVLKKAFQQKFGVKME 335


>gi|30264388|ref|NP_846765.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Ames]
 gi|47529839|ref|YP_021188.1| coproporphyrinogen III oxidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65321690|ref|ZP_00394649.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Bacillus anthracis str. A2012]
 gi|165872067|ref|ZP_02216707.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0488]
 gi|167634489|ref|ZP_02392809.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0442]
 gi|167638632|ref|ZP_02396908.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0193]
 gi|170687374|ref|ZP_02878591.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0465]
 gi|170707476|ref|ZP_02897930.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0389]
 gi|177653225|ref|ZP_02935477.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0174]
 gi|190566838|ref|ZP_03019754.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis Tsiankovskii-I]
 gi|196034544|ref|ZP_03101953.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           W]
 gi|227817093|ref|YP_002817102.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. CDC 684]
 gi|228916949|ref|ZP_04080510.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228929361|ref|ZP_04092384.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229123856|ref|ZP_04253049.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 95/8201]
 gi|229600096|ref|YP_002868606.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0248]
 gi|254684074|ref|ZP_05147934.1| coproporphyrinogen III oxidase [Bacillus anthracis str. CNEVA-9066]
 gi|254721908|ref|ZP_05183697.1| coproporphyrinogen III oxidase [Bacillus anthracis str. A1055]
 gi|254736422|ref|ZP_05194128.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741460|ref|ZP_05199147.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Kruger B]
 gi|254750898|ref|ZP_05202937.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Vollum]
 gi|254757774|ref|ZP_05209801.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Australia
           94]
 gi|301055809|ref|YP_003794020.1| coproporphyrinogen III oxidase [Bacillus anthracis CI]
 gi|30259046|gb|AAP28251.1| coproporphyrinogen dehydrogenase [Bacillus anthracis str. Ames]
 gi|47504987|gb|AAT33663.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|164712198|gb|EDR17735.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0488]
 gi|167513480|gb|EDR88850.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0193]
 gi|167529941|gb|EDR92676.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0442]
 gi|170127720|gb|EDS96593.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0389]
 gi|170668569|gb|EDT19315.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0465]
 gi|172081507|gb|EDT66579.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0174]
 gi|190561829|gb|EDV15798.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis Tsiankovskii-I]
 gi|195993086|gb|EDX57045.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           W]
 gi|227005310|gb|ACP15053.1| coproporphyrinogen dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228659570|gb|EEL15217.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 95/8201]
 gi|228830267|gb|EEM75881.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228842670|gb|EEM87757.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229264504|gb|ACQ46141.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0248]
 gi|300377978|gb|ADK06882.1| coproporphyrinogen III oxidase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 378

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 187/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 351

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 352 EESD-GYVRLTRKGKLLGNEVFQSFLI 377


>gi|49187212|ref|YP_030464.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Sterne]
 gi|49181139|gb|AAT56515.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. Sterne]
          Length = 379

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 187/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 298 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 353 EESD-GYVRLTRKGKLLGNEVFQSFLI 378


>gi|229104948|ref|ZP_04235604.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-28]
 gi|228678442|gb|EEL32663.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-28]
          Length = 379

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFTNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFTKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 298 DVHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQGNQEQGLLEERD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GYVRLTRKGKLLGNEVFQSFLI 378


>gi|229013537|ref|ZP_04170671.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides DSM 2048]
 gi|228747774|gb|EEL97643.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides DSM 2048]
          Length = 379

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 174/356 (48%), Gaps = 12/356 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++Q    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLQYLEKEIINTVQKVPFESMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+   + L  +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 122 QTFRNELLEKIGRRHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFTKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIE 369
           +   ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E
Sbjct: 298 DVHPVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLE 353


>gi|228935637|ref|ZP_04098451.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228823997|gb|EEM69815.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 378

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 187/385 (48%), Gaps = 23/385 (5%)

Query: 22  YVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GGGT
Sbjct: 5   YIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GVQ+
Sbjct: 63  PTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +  
Sbjct: 123 FRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTLG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S 
Sbjct: 183 VQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFSK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   ++ 
Sbjct: 243 GDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYLDV 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFIER 370
             ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +E 
Sbjct: 299 HVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLLEE 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                +R T++G  + + V  +  +
Sbjct: 354 SD-GYVRLTRKGKLLGNEVFQSFLI 377


>gi|89895882|ref|YP_519369.1| hypothetical protein DSY3136 [Desulfitobacterium hafniense Y51]
 gi|89335330|dbj|BAE84925.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 381

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 14/342 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-----MRQLTGPRSISSIF 75
           +Y+H PFCV+KC YC F S   + +V  E ++     E++      +RQ      I ++F
Sbjct: 4   LYIHVPFCVQKCNYCAFYSEPWQ-EVKAEAYLAGLNREVELRQEIVLRQQEVQEEIETLF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  +L  I          E TIEANP ++     +   + G+NRISL
Sbjct: 63  IGGGTPTALPEAELGALLSIIHGQLRFKDGGEKTIEANPGTLTAEKLRILSRQGINRISL 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  +  LR +GR H   E    + L R   F  ++ DL++ LP QT   W   ++ A
Sbjct: 123 GVQSFNDDLLRQIGRIHRTEEVREGVQLIREAGFKNLNLDLMFGLPGQTQADWRDTMEEA 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +HLS+Y L +E+GT    ++ +    LP ++   ++Y+L + I    G   YE+S
Sbjct: 183 LRLRPEHLSVYGLMVEEGTPL-ALNSESLTNLPDDDSQAEMYHLAREILGKAGYRHYEVS 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G E  HNL YW   DY+GIGP A   V   ++R   ++E     + KM+ +    
Sbjct: 242 NYALPGYECQHNLGYWHRKDYLGIGPSA---VSCLNNRRYQNVEDIL-LYAKMLSQGELP 297

Query: 315 V--VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           V   + EFLS  +Q  E L++GLRL++G+++  ++   G  L
Sbjct: 298 VDSQKNEFLSQHEQMAELLILGLRLKDGVNLSQFQKEVGAEL 339


>gi|228987568|ref|ZP_04147686.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228772166|gb|EEM20614.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 378

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q +G +E    
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQHNQEKGLLEESD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 356 EYVRLTRKGKLLGNEVFQSFLI 377


>gi|237741592|ref|ZP_04572073.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|229429240|gb|EEO39452.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
          Length = 367

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 195/376 (51%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E+  + ++        +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   +    L+ I   ++   N EITIE NP +V++N  + Y+K G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDS----LEKILSKFSYDKNTEITIEVNPKTVDINKLKEYKKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +  +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT+   + +L++ ++ 
Sbjct: 121 TFDNNNLKVLGRIHNSQEAIEVYNLARECGFENISLDIMFSLPNQTLAMLQNDLEKLVNL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW   +Y+G+G  A   +    ++   ++    + +   + KN   + E
Sbjct: 241 KKGFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFFNL----KDYYNNLDKNISPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+ E       ++G RL   I V   + L        C  +L ++G++   +   + 
Sbjct: 297 KEILTQEDIEQYRYLVGFRLLNRIIVPSEKYLE------RC-VSLYKEGYLIEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I+N 
Sbjct: 349 LSHKGLMLFNDFISNF 364


>gi|46143390|ref|ZP_00204462.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
          Length = 363

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 171/322 (53%), Gaps = 22/322 (6%)

Query: 46  VGQENFIQSFLTEMQWMRQLT------GPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
           + +  +IQ  L ++   + LT      G R I SIF GGGTPSL   + IA +L  + K 
Sbjct: 13  IPEAEYIQHLLADLS--QDLTAYQLAIGNRKIHSIFIGGGTPSLFSAEGIAYLLAEVEKR 70

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
                ++EIT+EANP + E   F GY + GV RIS+G+QS E + L  LGR H+++EA  
Sbjct: 71  IPFEEHIEITLEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDSNEAKQ 130

Query: 160 AIHLARNI----FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           A+  A+N         + DL++ LP Q++ Q   +L++ ++ A  HLS YQLTIE  T+F
Sbjct: 131 AVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALDDLRQGIALAPPHLSWYQLTIEPNTMF 190

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
           Y         LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY
Sbjct: 191 YYRQP----TLPDDDELWDIFEQGHQLLTAAGYEQYETSAYAKKGYQCRHNLNYWRFGDY 246

Query: 276 IGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG 334
           + IG GAH ++   +  +   S  KHP+ +++     G     ++ +    +  EF M  
Sbjct: 247 LAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-----GEYRYSQDLIELADRPFEFFMNR 301

Query: 335 LRLREGISVKDWEMLAGRNLDI 356
            RL E    +++E   G + +I
Sbjct: 302 FRLLEATPKQEFEFYTGLDREI 323


>gi|327470135|gb|EGF15599.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK330]
          Length = 376

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 196/374 (52%), Gaps = 19/374 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L  +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLKKLTDKLDLSYLEELTIEANPGDLDREKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFDHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHAVVEK 318
           G ES HNL YW   +Y GIG GA   V        +  + H P        + G+A V++
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVN------GVRYKNHGPIRHYMQAVEAGNARVQE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   +   
Sbjct: 297 EVLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVPDR-DI 355

Query: 376 LRCTQRGMTMLDSV 389
           +R T++G+ + D+V
Sbjct: 356 VRMTKQGLFLGDTV 369


>gi|269123869|ref|YP_003306446.1| oxygen-independent coproporphyrinogen III oxidase [Streptobacillus
           moniliformis DSM 12112]
 gi|268315195|gb|ACZ01569.1| oxygen-independent coproporphyrinogen III oxidase [Streptobacillus
           moniliformis DSM 12112]
          Length = 360

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 197/389 (50%), Gaps = 40/389 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            N  G+Y+H PFC K+C YCDF      N  + RY       ++  + E++       P 
Sbjct: 2   KNITGIYIHVPFCNKRCHYCDFHVFINMNDKIERY-------VEYVIKEIKLY-----PE 49

Query: 70  SI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            I  +I+FGGGTPSL+  + I  ILD + K    + N EIT+E NPS +++   +  + A
Sbjct: 50  YIYDTIYFGGGTPSLLNGEQIRKILDNLKK----TDNAEITLELNPSDMDLEKLKYIKNA 105

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+G QS  +  L+F+ R+H++ +AI     AR   F  +S DLI+++P Q M   
Sbjct: 106 GINRLSIGFQSFNDDMLKFMNRDHSSKKAIETYRNARIAGFDNISLDLIFSVPNQDMEML 165

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E +L + L  + +HLS+Y L  E+GT F K  + G+L    E++  D++   Q      G
Sbjct: 166 ENDLDKFLELSPEHLSIYSLIWEEGTNFTKRLEKGELKALDEDLEADMFLKIQERLVKSG 225

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEIS+    G ES HN+ YW   +YIG+G  A S     + R A    K    + ++
Sbjct: 226 YNHYEISSFCKDGKESKHNIKYWNNTEYIGVGVNATSF--YNNQRFAKV--KSLARYYRL 281

Query: 308 VRKNGHAVVEK--EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           + +N   + EK  E +   +  +   ++GLR+     +K  E      +D   ER     
Sbjct: 282 IDQNIIPIEEKTIEIVDDVELENLKYILGLRML----IKGVEYTPNEKIDKLIER----- 332

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G IER    R++ T +G+ + + V     
Sbjct: 333 GLIERFD-DRIKLTSKGVLLSNEVFVEFV 360


>gi|167630495|ref|YP_001680994.1| oxygen-independent coproporphyrinogen iii oxidase, hemn
           [Heliobacterium modesticaldum Ice1]
 gi|167593235|gb|ABZ84983.1| oxygen-independent coproporphyrinogen iii oxidase, hemn
           [Heliobacterium modesticaldum Ice1]
          Length = 408

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 175/343 (51%), Gaps = 31/343 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIF 75
           GVY+H PFC  KC YCDF SH     +++   N +  Q      QW  +L  P   +++F
Sbjct: 22  GVYIHVPFCRSKCAYCDFYSHPAGSEFRMAYANAVIGQMEREADQWRHRL--PSGPATVF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSS-------NVEITIEANPSSVEVNNFQGYRKA 128
           FGGGTP+L+       IL+ + + +            +EITIEANP +V+      + +A
Sbjct: 80  FGGGTPTLLPADAGVRILETLRRCYGWDDLGKRSGIPMEITIEANPGTVDERELAIWAEA 139

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ+ + + L FLGR    ++   A+  AR      +S DLIY +P QT+  W
Sbjct: 140 GCNRLSLGVQAFQPRLLTFLGRCQRLNDVTEALAAARKAGIDNISLDLIYGIPGQTLEDW 199

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            + L+ ALS +  HLSLY L  E+GT   +    G      E++ V++Y   Q    + G
Sbjct: 200 RLSLKLALSLSPAHLSLYNLKTEQGTRLAEWMMRGLAEPCVEDLEVEMYEEAQQTLQSAG 259

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-------KVGSHRVAISIEKH 300
              YE+SN +  G E  HNLNYWR GDY+G G GA S            S    +S EK 
Sbjct: 260 FLQYELSNFAQPGWECRHNLNYWRRGDYLGFGSGAVSTAGLRRWSWPADSSAFVLSFEKG 319

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            E             VE+E LS E  A E +++GLR R G+++
Sbjct: 320 EEI----------QPVEEECLSPELAAREAIILGLRTRAGVNL 352


>gi|126640474|ref|YP_001083458.1| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 182/326 (55%), Gaps = 14/326 (4%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           RSI S+F GGGTPSLI  +    + + +        + EIT+EANP ++E + F GY +A
Sbjct: 5   RSIHSVFIGGGTPSLISAKGYVWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEA 64

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q 
Sbjct: 65  GINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARRAGFKRVNVDLMHGLPEQTLEQA 124

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G
Sbjct: 125 LYDLKTAVEHGATHISWYQLTIEPNTVFFRTQP----VLPQDEVLEDIQEQGEAYLKANG 180

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+S        S+HNLNYW++GDY+ IG GAH +V            + P+ +L  
Sbjct: 181 FINYEVSAWR-KEQPSVHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAK 239

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QR 364
           V    H  ++K  + +++   EF+M  LRL +G+  + +E   G +LD   +       R
Sbjct: 240 VPAE-HLQMKK--IEADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTSLRSR 296

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVI 390
           +  +E     RL CT++G   L+SV+
Sbjct: 297 ELLVEDS--GRLACTEQGHIFLNSVL 320


>gi|328946163|gb|EGG40308.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1087]
          Length = 376

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 199/374 (53%), Gaps = 19/374 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEYLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       +++ VNR+SLGVQ+ 
Sbjct: 63  PTALSVSQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKESPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHAVVEK 318
           G ES HNL YW   +Y GIG GA   V        I  + H P        + G+A V++
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVN------GIRYKNHGPIRHYLQAVEAGNARVQE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   + + 
Sbjct: 297 EALTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVPDR-NI 355

Query: 376 LRCTQRGMTMLDSV 389
           +R T++G+ + D+V
Sbjct: 356 VRMTKQGLFLGDTV 369


>gi|327489652|gb|EGF21444.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1058]
          Length = 376

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 203/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYNAYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H+  +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y G+G GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGVGAGASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+  ++ +E + +GLR + G+S K +E   G + + +       L  +G +   +   +
Sbjct: 298 VLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVAELTEKGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|325689791|gb|EGD31795.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK115]
 gi|325696409|gb|EGD38299.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK160]
          Length = 376

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 197/372 (52%), Gaps = 15/372 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC + C YCDF+         Q   + S+L  +         + + +++ GGGTP
Sbjct: 9   YVHIPFCTQICYYCDFSK-----VFIQNQPVDSYLEHLIEEYNSYDIKKLRTLYIGGGTP 63

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+  
Sbjct: 64  TALSAHQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTFN 123

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ LR +GR+H   +    I  L +  F  +S DLIYALPKQTM   +  + +A++  + 
Sbjct: 124 DRMLRQIGRSHLEKDIYENIADLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDIP 183

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  G
Sbjct: 184 HMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKPG 243

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW   +Y GIG GA   V    ++    I +H   +L  V + G+A V++E 
Sbjct: 244 FESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLHAV-EAGNARVQEEV 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLR 377
           L+ +++ +E + +GLR R G+S K +E   G + + +      +L  +G +   +   +R
Sbjct: 299 LTLKEKMEEEMFLGLRKRAGVSKKRFEEKFGVSFEDQYGAVVADLTERGLLVPDR-DMVR 357

Query: 378 CTQRGMTMLDSV 389
            T++G+ + D+V
Sbjct: 358 MTKQGLFLGDTV 369


>gi|163942073|ref|YP_001646957.1| coproporphyrinogen III oxidase [Bacillus weihenstephanensis KBAB4]
 gi|229135142|ref|ZP_04263943.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST196]
 gi|163864270|gb|ABY45329.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus weihenstephanensis KBAB4]
 gi|228648319|gb|EEL04353.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST196]
          Length = 379

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 175/356 (49%), Gaps = 12/356 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++Q    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLQYLEKEIINTVQKVPFESMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ DLIYALP Q++   +  L  A +
Sbjct: 122 QTFRDELLEKIGRRHTREDAFVAIREAQEVGFTNINVDLIYALPGQSIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFTKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIE 369
           +   ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E
Sbjct: 298 DVHPVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLE 353


>gi|229824838|ref|ZP_04450907.1| hypothetical protein GCWU000182_00187 [Abiotrophia defectiva ATCC
           49176]
 gi|229790841|gb|EEP26955.1| hypothetical protein GCWU000182_00187 [Abiotrophia defectiva ATCC
           49176]
          Length = 385

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 207/387 (53%), Gaps = 24/387 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           LG+YVH PFC +KC YCDF S +   +  ++N+I++   E++ + ++++    + +I+FG
Sbjct: 4   LGIYVHIPFCARKCNYCDFYS-LASGEDEKKNYIEALKREIKEVSKKVSTDYEVYTIYFG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSN---VEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGTPS+I+   I  ILD I   + +  +    EITIE NP +V+      Y +AG+NR+S
Sbjct: 63  GGTPSIIKADYIREILDVIRSYFKLYKDDFYPEITIECNPKTVDTEKLSIYSEAGINRVS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS +   L+ LGR H   + + +  + R   F  ++ DL+ A+P Q +  +E  L  
Sbjct: 123 LGLQSTDNDELKLLGRIHTYEDFLESYEMVRKSGFKNVNIDLMSAIPNQKIKTYEKSLNE 182

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHA 250
            +    +H+S Y L IE+GT F+K + +       LPSE+   ++Y LT       G   
Sbjct: 183 IIRLNPEHISSYSLIIEEGTPFFKKYSENAPHFKDLPSEDEDREMYALTSEKLGKAGYER 242

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G  S HN +YW    Y+G G GA S  +   +       K+  ++ + ++K
Sbjct: 243 YEISNYAKPGFYSRHNTSYWERVPYLGFGVGASSFFEDERY-------KNRANFKEYIKK 295

Query: 311 NGHAVVEKEF--LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQR 364
            G   + +E   L+      EF+ +GLR   GIS  +++ +    ++       E++++ 
Sbjct: 296 AGIEDIREEITKLTLNDTMTEFMFLGLRKTAGISKSEFKKIFTFTVENVFGKMIEKHIKN 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIA 391
              +   +F  L+ ++RG+ + + VI+
Sbjct: 356 GLLLNDGEF--LKLSERGLDISNYVIS 380


>gi|229031966|ref|ZP_04187952.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1271]
 gi|228729356|gb|EEL80347.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1271]
          Length = 378

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 183/388 (47%), Gaps = 25/388 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTRKDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEARMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG---- 312
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G    
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 313 --HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGF 367
             HAV EKE +  E      L +GLR  +G+S   ++      +D    + L   Q QG 
Sbjct: 297 DVHAVTEKERMEEE------LFLGLRKTKGVSKIGFQKKFNLEIDQVFAKQLQSNQEQGL 350

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +E      +R T++G  + + V  +  +
Sbjct: 351 LEESD-GYVRLTRKGKLLGNEVFQSFLI 377


>gi|47569313|ref|ZP_00239997.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
 gi|47553984|gb|EAL12351.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
          Length = 379

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q +G +E    
Sbjct: 298 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQHNQEKGLLEESD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 EYVRLTRKGKLLGNEVFQSFLI 378


>gi|91201534|emb|CAJ74594.1| similar to coproporphyrinogen III oxidase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 398

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 197/380 (51%), Gaps = 15/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           L +Y+H PFC KKC YCDFNS      V + + I  ++  + + +       +  +++ G
Sbjct: 28  LPLYLHIPFCSKKCDYCDFNS-----IVSEADIIDRYINALGKELNAFAERYACDTVYVG 82

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++    I  +L  I +    +   E T+EANP ++     +  ++ GVNRIS+GV
Sbjct: 83  GGTPTILNENQIKTLLHSIRRCPENADAPEYTVEANPGTLTRGKVRLLKECGVNRISVGV 142

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L FLGR H ++ A+ +I L     F  ++ DLI+  P QT+ +W  +L+ A+ 
Sbjct: 143 QSFQDRYLNFLGRIHTSAVAVQSIELIISEGFKNVNIDLIFGYPGQTLDEWIRDLRMAVE 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y LT E  T   K  ++G +    E + + +Y         +    YEISN 
Sbjct: 203 LQPEHISTYALTYEGETPLAKKAENGSISKLDEEIELKMYKTAIRFLQENNYCHYEISNF 262

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E +HN+NYW    YIGIG GA S +  G   +    E++   ++K +  N    V
Sbjct: 263 ARPGYECVHNINYWNNKRYIGIGAGACSFID-GERTMN---ERNVLQYIKAIEDNTEVKV 318

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
            +E L   + A E ++M LR+  GIS  ++    G  ++ +     ++LQ  G +     
Sbjct: 319 FRESLLPHKYASETIVMALRMLRGISGIEFYDRFGYKIEDQFGTQMKDLQCLGLV-NYDD 377

Query: 374 SRLRCTQRGMTMLDSVIANL 393
            RL+ T++G+ + DSV++  
Sbjct: 378 KRLKLTEKGLFVADSVMSEF 397


>gi|322385638|ref|ZP_08059282.1| coproporphyrinogen dehydrogenase [Streptococcus cristatus ATCC
           51100]
 gi|321270376|gb|EFX53292.1| coproporphyrinogen dehydrogenase [Streptococcus cristatus ATCC
           51100]
          Length = 376

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 199/373 (53%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    S     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIISELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V   G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLQAVEA-GNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVSELTEQGLLVPDK-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|187736591|ref|YP_001878703.1| oxygen-independent coproporphyrinogen III oxidase [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187426643|gb|ACD05922.1| oxygen-independent coproporphyrinogen III oxidase [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 369

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 201/378 (53%), Gaps = 17/378 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRS--ISSIFFG 77
           +YVH PFC + CPYC F  H        ++FI++   E +     L   R    ++++FG
Sbjct: 3   LYVHIPFCHRICPYCAFFKHTPA-STDMKSFIRALGREAESRAAALATNRGGETATLYFG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++   ++   ++ + +   V    E + EANP++      + +R  G+ R+SLGV
Sbjct: 62  GGTPSMLSDTHLGHFMETLDRLVPVDKLDEFSFEANPATFTEKKVRFWRSLGMTRVSLGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL+   L  LGR H  ++A+ ++ + +N   P ++ DL++A+P QT++ WE  L+ A+ 
Sbjct: 122 QSLDSGILHLLGREHTPAQALHSVEMLKNAGMPHINMDLMFAIPGQTLSIWEATLKEAVR 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISN 255
              DH+S Y LT E+ T F++    G+    P E+ A   + L + +  A GL  YE SN
Sbjct: 182 AGTDHISAYNLTYEEDTEFFRSLLRGEKRQDPDEDAA--FFELAEHMLEAAGLRHYETSN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  S HN+ YW+  DY+GIGPGA S +    + +  S  +  +++++   +NG  +
Sbjct: 240 YAREGCISPHNMAYWKGEDYVGIGPGAVSTI----NGIRYSNTRDTDAYIRSTLENGLPL 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            E+E ++ E    E + + LR  EG+ +K + +   R L +E  R L   G  +     R
Sbjct: 296 SEQEPVTEEDYRLERIALMLRTDEGLPLK-YILPESRPL-LEQYREL---GLADISPEQR 350

Query: 376 LRCTQRGMTMLDSVIANL 393
                RG  ++D++ A L
Sbjct: 351 FILKGRGRLLVDAIAAEL 368


>gi|206976009|ref|ZP_03236919.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           H3081.97]
 gi|217961807|ref|YP_002340377.1| coproporphyrinogen III oxidase [Bacillus cereus AH187]
 gi|222097762|ref|YP_002531819.1| coproporphyrinogen iii oxidase [Bacillus cereus Q1]
 gi|229141055|ref|ZP_04269597.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST26]
 gi|206745761|gb|EDZ57158.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           H3081.97]
 gi|217065239|gb|ACJ79489.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH187]
 gi|221241820|gb|ACM14530.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           Q1]
 gi|228642333|gb|EEK98622.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST26]
 gi|324328221|gb|ADY23481.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 378

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLNIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 356 GYVRLTRKGKLLGNEVFQSFLI 377


>gi|41408305|ref|NP_961141.1| coproporphyrinogen III oxidase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396661|gb|AAS04524.1| HemN [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 390

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 193/381 (50%), Gaps = 13/381 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            +  G+YVH PFCV +C YCDFN++       V  + ++ +  TE++       P  +++
Sbjct: 18  GHPFGLYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLGALRTELELAAARLRPPPVNT 77

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +AL+LD + +++ ++ + EIT EANP S     F     AG  R+
Sbjct: 78  VFVGGGTPSLLGGARLALLLDMVREHFALAPDAEITTEANPESTWPEFFDAIGAAGYTRV 137

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+QS+  + L  L R H  + +  A   A    F  +S DLIY  P ++       L 
Sbjct: 138 SLGMQSVAPRVLGVLDRIHTPNRSADAAREALAAGFEHVSLDLIYGTPGESDEDLLWSLD 197

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  GL  YE
Sbjct: 198 TAIESGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSQAGLSWYE 257

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN S  G +  HNL YW  G + G GPGAH    VG+ R      KHP ++ + +    
Sbjct: 258 VSNWSRPGGQCRHNLGYWDGGQWWGAGPGAHG--YVGTTRWWNV--KHPNAYAERLNAAA 313

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             V   E L SE    E +++ +RLR+G  V   ++L   + + E  + +   G + R  
Sbjct: 314 LPVAGFEQLGSEALHTEDVLLKIRLRQGFPV---DLL--NSAERERAQGVVADGLLVR-D 367

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             RL  T RG  + D V+  L
Sbjct: 368 GDRLVLTPRGRLLADGVVRTL 388


>gi|49481357|ref|YP_038372.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332913|gb|AAT63559.1| coproporphyrinogen oxidase (oxygen-independent coproporphyrinogen
           III oxidase) [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 379

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 187/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMYEMERHGYTQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 298 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 353 EESD-GYVRLTRKGKLLGNEVFQSFLI 378


>gi|253733165|ref|ZP_04867330.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253728705|gb|EES97434.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 313

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 158/296 (53%), Gaps = 12/296 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLRTMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 62  TALSIDQLERLLRAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 120 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
            ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K   A++
Sbjct: 240 HESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKESKAIL 291


>gi|327460452|gb|EGF06789.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1057]
          Length = 376

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 204/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ ++    +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLSDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLHLPKEDLEAEMFEYIIAELGKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ +++ +E + +GLR + G+S K +E   G + + +      +L  QG +   +   +
Sbjct: 298 VLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEGQYGAVVSDLTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|148657973|ref|YP_001278178.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus sp. RS-1]
 gi|148570083|gb|ABQ92228.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus sp. RS-1]
          Length = 406

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 190/395 (48%), Gaps = 34/395 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRS 70
           G++   +Y+H PFC ++C YCDFN++    +   E ++ +   E++      R +  P  
Sbjct: 7   GADVRHLYIHIPFCHRRCAYCDFNTYAN-MEDRMEAYVTALCAELRSHAPLSRAVAPPLP 65

Query: 71  IS----------SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           ++          +IF GGGTPS++    +A IL   A       + E+T+E NP +V   
Sbjct: 66  MTADLTRAMLRPTIFLGGGTPSMLPDALMARILSA-ADAIVPLDSAEVTVECNPGTVLAR 124

Query: 121 NF-QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           ++ +  R  GVNRISLGVQSL + +LR LGR H A+EA A+ + AR   F  ++ D I+ 
Sbjct: 125 DYLRALRDLGVNRISLGVQSLHDPTLRVLGRIHTAAEAYASFNDARAAGFESINLDFIFG 184

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+ QWE  L+  +++  DH +LY L +E+ T  Y     G + +P ++V   +Y  
Sbjct: 185 LPGQTVEQWEETLREIVTWGADHFALYALILEERTPLYAQVISGRVTVPDDDVTAVMYEC 244

Query: 239 TQSITSAHGLHAYEISNHSFLGAESL--------HNLNYWRYGDYIGIGPGAHSRVKVGS 290
                +A G   YEISN +     S         HNL YW   DY+  G GAH       
Sbjct: 245 ALEHFAAAGYVQYEISNWARTDDPSSPVPTHACHHNLAYWLNADYLAAGAGAHGHRYPQR 304

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           +   + I+     ++  V      V E   L+    A E + MGLRL  G+S   +    
Sbjct: 305 YVNVMGIDD----YIARVSAGESPVAEITALTPRDLAAETMFMGLRLNVGVSATHFRDRC 360

Query: 351 GRNLDIECE---RNLQRQGFIERVQFSRLRCTQRG 382
           G  +D         L   G IER +   +R T RG
Sbjct: 361 GVEMDAVFGAELAELAELGLIERDERG-VRLTSRG 394


>gi|323699377|ref|ZP_08111289.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           sp. ND132]
 gi|323459309|gb|EGB15174.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           desulfuricans ND132]
          Length = 409

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 203/385 (52%), Gaps = 23/385 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQ-WMRQLTGPRSISSIFF 76
           +Y+H PFC  +C YC F+S           F   +   L E++ W R+L  PR + +++F
Sbjct: 34  LYIHVPFCRSRCHYCSFHSQ----SFDPTTFAWYLSLLLREIELWGRRLQRPR-LRTVYF 88

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISL 135
           GGGTPSLI    +  I+  + K + ++   E TIEANP S  +V+ F+G    G NR+SL
Sbjct: 89  GGGTPSLIPLAGLDRIMAALRKAFVLNPGAETTIEANPDSAHDVSYFRGLLSLGFNRLSL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QSL++  L+ +GR H+ + A  A   AR   F  +  DLI+ LP Q +  W  +L+  
Sbjct: 149 GMQSLKDADLQVMGRPHSVAMAYQAFDQARRAGFGNIGVDLIWGLPGQRLKVWLDQLRIV 208

Query: 195 LSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                +H+S Y LT+E+GT+  +   + GDL LP +     ++        + G   YE+
Sbjct: 209 SEMRPEHISAYNLTLEEGTVMARRCGEGGDLALPLDQEQGRMFVYGAEYLESVGYLHYEV 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN + +G  S+HN  YW   DY+G+GP A S   +G  R   ++ ++ + +   VR  G 
Sbjct: 269 SNFARMGFTSVHNSGYWDGSDYLGLGPSAVS--TLGRRR--FTVPRYMDEYDAYVR--GE 322

Query: 314 AVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIE 369
            V  + E L+ +   +E +M+ LR   G+ +K++    G +L    E+    L R+  + 
Sbjct: 323 LVGNDYEELTDDILLEEMVMLSLRTSRGLDLKEYRRRTGLDLVKRKEQLISALHRENLV- 381

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           R+   RLR T+ GM + + +I  LA
Sbjct: 382 RISGGRLRLTKNGMLVSNVIIERLA 406


>gi|196044778|ref|ZP_03112012.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           03BB108]
 gi|225866298|ref|YP_002751676.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           03BB102]
 gi|229186557|ref|ZP_04313718.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BGSC 6E1]
 gi|196024266|gb|EDX62939.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           03BB108]
 gi|225787428|gb|ACO27645.1| coproporphyrinogen dehydrogenase [Bacillus cereus 03BB102]
 gi|228596816|gb|EEK54475.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BGSC 6E1]
          Length = 378

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 186/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+   + L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRNELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 351

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 352 EESN-GYVRLTRKGKLLGNEVFQSFLI 377


>gi|319947179|ref|ZP_08021413.1| coproporphyrinogen dehydrogenase [Streptococcus australis ATCC
           700641]
 gi|319747227|gb|EFV99486.1| coproporphyrinogen dehydrogenase [Streptococcus australis ATCC
           700641]
          Length = 376

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 194/375 (51%), Gaps = 21/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS---SIFFGG 78
           YVH PFC + C YCDF+      KV  +N  Q     ++ + Q T    I    +++ GG
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKN--QPVDAYLEHLIQETRSYEIGKLRTLYIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +A +L  + K   +S   E TIEANP  ++ +     + + VNR+SLGVQ
Sbjct: 61  GTPTALSAQQLAYLLTELPKVMDLSEVEEFTIEANPGDLDTDKIAVLKDSQVNRVSLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + + L+ +GR+H   +    I +L +  F  +S DLIYALP QTM Q +  + +A+  
Sbjct: 121 TFDNKMLKKIGRSHQEQDIYDNIRYLKQAGFDNISIDLIYALPGQTMDQVKENIAKAIDL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY L +E  T+F    + G L LP E +  +++          G   YEISN S
Sbjct: 181 DIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIEELEKAGFEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G+G GA   V    ++    I  + E+      + G A + 
Sbjct: 241 KPGFESRHNLVYWDNAEYYGLGAGASGYVDGIRYKNHGPIRHYLEAV-----EAGKARIT 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
           +E L+ E++ +E L +GLR + G+S   +E   G + D    +   +L  QG +      
Sbjct: 296 EEHLTLEEKMEEELFLGLRKKTGVSKARFEEKFGVSFDQRYGQVVASLTGQGLLVPDD-K 354

Query: 375 RLRCTQRGMTMLDSV 389
           ++R T+RG+ + D+V
Sbjct: 355 QVRMTKRGLFLGDTV 369


>gi|229157931|ref|ZP_04286004.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 4342]
 gi|228625539|gb|EEK82293.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 4342]
          Length = 378

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKDDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q +G +E    
Sbjct: 297 DVHGVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQHNQEKGLLEESD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 356 EYVRLTRKGKLLGNEVFQSFLI 377


>gi|52141187|ref|YP_085643.1| coproporphyrinogen III oxidase [Bacillus cereus E33L]
 gi|118479485|ref|YP_896636.1| coproporphyrinogen III oxidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|51974656|gb|AAU16206.1| coproporphyrinogen oxidase (oxygen-independent coproporphyrinogen
           III oxidase) [Bacillus cereus E33L]
 gi|118418710|gb|ABK87129.1| coproporphyrinogen III oxidase, anaerobic [Bacillus thuringiensis
           str. Al Hakam]
          Length = 379

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 186/387 (48%), Gaps = 23/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+   + L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRNELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECE-------RNLQRQGFI 368
           +   ++ +++ +E L +GLR  +G+S      +A RN  ++E         +N Q QG +
Sbjct: 298 DVHVVTEKEKMEEELFLGLRKTKGVS-----KMAFRNKFNVEMNQVFAKQLQNNQEQGLL 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E      +R T++G  + + V  +  +
Sbjct: 353 EESN-GYVRLTRKGKLLGNEVFQSFLI 378


>gi|228469475|ref|ZP_04054479.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas uenonis 60-3]
 gi|228308990|gb|EEK17642.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas uenonis 60-3]
          Length = 371

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 191/383 (49%), Gaps = 22/383 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
           G+Y+H PFC  +C YCDF  + +     Q +F+++   E++ +  + T      +I+ GG
Sbjct: 3   GLYLHIPFCPTRCVYCDF--YSQSDLSLQSSFVEALCRELEIYHDRATWATPPRTIYLGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    +  ++  I   W +   +EITIEANP  V      G    G NRISLGVQ
Sbjct: 61  GTPSSLPLPLLERLMQQIRSLWRLDKTIEITIEANPEDVSPEWANGVALLGFNRISLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +++LRFL R H+A++A  A++  R      +S DLI+ALP+     W   L  AL+ 
Sbjct: 121 SWSDETLRFLHRRHSAAQAERAVNYIRQAGIHNVSIDLIFALPEGYERDWTESLAHALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y LT E+GT   +M +  +++  SE   V  Y    +     G   YE+SN +
Sbjct: 181 PVTHFSAYGLTYERGTRLDRMRERREVIPSSEETYVTQYYALVAACQKAGFTHYELSNWA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YW    Y+G+GP AHS   +  HR     + H   +++ ++++   + +
Sbjct: 241 LPGFASQHNSAYWAGTPYLGLGPSAHS--YMSGHRWWDVSDIH--LYIERLQEDQLPIAD 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR------QGFIERV 371
           +E+LS  +  +E +M+GLR   GI +        R  +++ E  + R      QG +   
Sbjct: 297 EEWLSPTELYEECVMLGLRTSRGIDL--------RRAELQVEPIMDRATPWLDQGLLILT 348

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               LR T  G+   D + A L 
Sbjct: 349 DDDHLRLTHDGLIWCDRICAALC 371


>gi|293189689|ref|ZP_06608406.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces odontolyticus F0309]
 gi|292821427|gb|EFF80369.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces odontolyticus F0309]
          Length = 438

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 163/351 (46%), Gaps = 25/351 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGP--- 68
           +    L +YVH PFC  +C YCDFN++   +  G +  ++  S L E     ++      
Sbjct: 27  EARRPLSLYVHVPFCRVRCGYCDFNTYTVGFGPGAQVGDYAPSVLAEATLAARVMAESGL 86

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R   ++FFGGGTP++++   +A IL G+ +   ++   E+T+EANP +V         
Sbjct: 87  PVREAETVFFGGGTPTMLDTAELAEILTGLRERIGIAPGAEVTLEANPDTVTREGLVQLA 146

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG  R+S G+QS     L+ L R H        +  A+      S DLIY  P ++   
Sbjct: 147 DAGFTRVSFGMQSAVPAILKTLDRTHTPERVPLVVQWAKEAGLSTSVDLIYGTPGESFAD 206

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           WE  L+ ALSY  DH+S Y L +E GT        G+L  P  +     Y L   + S  
Sbjct: 207 WETSLRAALSYDTDHISAYALVVEGGTKMGAQVARGELPTPDPDDEAAKYELADVLLSEA 266

Query: 247 GLHAYEISN--------------HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
           G   YEISN               +F    S HNL YWR  D+ G+GPGAHS   VG  R
Sbjct: 267 GYAWYEISNFARTTDADLTSGRPSTFYAHASAHNLAYWRDWDWWGLGPGAHSH--VGCMR 324

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 K+P ++   +R         E L  + +  E +M+G+R  EGI +
Sbjct: 325 WWNV--KNPAAYAARLRDGRSPAYAGEILDEDTRELERVMLGVRTSEGIEL 373


>gi|46198431|ref|YP_004098.1| coproporphyrinogen oxidase, anaerobic [Thermus thermophilus HB27]
 gi|46196053|gb|AAS80471.1| coproporphyrinogen oxidase, anaerobic [Thermus thermophilus HB27]
          Length = 365

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/383 (33%), Positives = 190/383 (49%), Gaps = 35/383 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC   CPYCDF+  VRR     E +++    E Q + +   P  + +++ GGGT
Sbjct: 4   LYVHVPFCPTLCPYCDFHV-VRRGPGWVEAYLRRLKEEAQALHERF-PEPLRTLYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  + +  +   +   W ++   E+T+EANP ++     +  +  GVNR+SLGVQS 
Sbjct: 62  PSYLRDRELVALFQSL--PWALAQGAEVTLEANPGTLSPGRLRLLQDLGVNRLSLGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++  L+FLGR H    A+ A+ +A     R+S DLI  LP Q +   E +L+ A    V 
Sbjct: 120 QDPVLKFLGRAHGRKGALRAVEMALEWGFRVSIDLILGLPMQDV---EADLKEAARLGVG 176

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +EKGT F  +    D     E  A  +    + +  A GL  YE+SN +  G
Sbjct: 177 HVSAYTLQVEKGTPFALLGLKED----PEREAWAMERAEEVLGEA-GLFRYEVSNFAREG 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEKE 319
            E+ HNL YWR G ++ +GP A  +        A+     P   WL+     G A  E E
Sbjct: 232 EEARHNLVYWRAGFWLALGPAATGQYPGEGGAYALRRTAPPLPRWLR-----GEAPKE-E 285

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWE---------MLAGRNLDIECERNLQRQGFIER 370
            +S  + A E LM+GLRLREG+ V   E         +L GR  ++  E  LQ +G    
Sbjct: 286 AISPLEHAKESLMLGLRLREGVDVGAVEERTGLALFPLLQGRAEELAQEGLLQVRG---- 341

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
               RL  T +   +L  V+  L
Sbjct: 342 ---KRLLPTPKAFPLLHRVVLAL 361


>gi|154509298|ref|ZP_02044940.1| hypothetical protein ACTODO_01823 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798932|gb|EDN81352.1| hypothetical protein ACTODO_01823 [Actinomyces odontolyticus ATCC
           17982]
          Length = 438

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 163/351 (46%), Gaps = 25/351 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGP--- 68
           +    L +YVH PFC  +C YCDFN++   +  G +  ++  S L E     ++      
Sbjct: 27  EARRPLSLYVHVPFCRVRCGYCDFNTYTVGFGPGAQVGDYAPSVLAEASLAARVMAESGL 86

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R   ++FFGGGTP++++   +A IL G+ +   ++   E+T+EANP +V         
Sbjct: 87  PVREAETVFFGGGTPTMLDTAELAEILTGLRERIGIAPGAEVTLEANPDTVTRQGLVQLA 146

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG  R+S G+QS     L+ L R H        +  A+      S DLIY  P ++   
Sbjct: 147 DAGFTRVSFGMQSAVPAILKTLDRTHTPERVPLVVQWAKEAGLSTSVDLIYGTPGESFAD 206

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           WE  L+ ALSY  DH+S Y L +E GT        G+L  P  +     Y L   + S  
Sbjct: 207 WETSLRAALSYETDHISAYALVVEGGTKMGGQVARGELPTPDPDDEAAKYELADVLLSEA 266

Query: 247 GLHAYEISN--------------HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
           G   YEISN               +F    S HNL YWR  D+ G+GPGAHS   VG  R
Sbjct: 267 GYAWYEISNFARTTDADLTSGRPSTFYAHASAHNLAYWRDWDWWGLGPGAHS--HVGCMR 324

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 K+P ++   +R         E L  + +  E +M+G+R  EGI +
Sbjct: 325 WWNV--KNPAAYAARLRDGRSPAYAGEILDEDTRELERVMLGVRTSEGIEL 373


>gi|295136119|ref|YP_003586795.1| oxygen-independent coproporphyrinogen III oxidase [Zunongwangia
           profunda SM-A87]
 gi|294984134|gb|ADF54599.1| oxygen-independent coproporphyrinogen III oxidase [Zunongwangia
           profunda SM-A87]
          Length = 375

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 192/377 (50%), Gaps = 11/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   + +   E+   +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKKKSELVSALQNELVLRKNELPNEPIKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + +  I   I   +T++ N EIT+EANP  +          + +NR+S+GVQS
Sbjct: 61  TPSLLNLEELTAIFKTIYTEFTIAENPEITLEANPDDLSEEKINELANSKINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA EA+ +I LAR+ F  +S DLIY +P  +  +W+  +Q  L   +
Sbjct: 121 FFEEDLKLMNRAHNAEEALNSIKLARSKFDNISVDLIYGIPGMSNERWQKNIQILLDLDI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  + G +    +  A   +   +++    G   YE SN+   
Sbjct: 181 PHISSYSLTVEPNTALQKFIEKGKIKPVDDAAAAQHFETLRTVLKNAGFEHYEFSNYGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW    Y+GIGP AHS     S +  I+   +   ++K + +     +E E
Sbjct: 241 GYFSQNNTAYWLGKPYLGIGPSAHS-YDGNSRKWNIA---NNTLYIKAIER-SELPLEVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIECERN--LQRQGFIERVQFSRL 376
            LS   + +E++M  LR   G+ + + E   G+  L+   E++  L  + F+ R++ + +
Sbjct: 296 ELSITDRYNEYIMTRLRTYFGVDLVEVESKFGKEYLEYLKEQSVVLFEKEFL-RIENNVM 354

Query: 377 RCTQRGMTMLDSVIANL 393
             T++G  + D + A+L
Sbjct: 355 HITEKGTFLSDGIAADL 371


>gi|324995689|gb|EGC27601.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK678]
          Length = 376

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 202/373 (54%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYHSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYDNITNLKKVGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYVIAELGKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 ALTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGVSFEDQYGAVVSELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|298373609|ref|ZP_06983598.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274661|gb|EFI16213.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 373

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 190/376 (50%), Gaps = 10/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C YC F S    Y   ++ ++     E++  +       + S++FGGGT
Sbjct: 2   LYIHIPFCKSRCVYCSFFSST--YLELKKQYVSLLCREIETRKDYLDTNVLKSVYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL++  +++ I + I K + ++   E+TIE N   V+ +  +  R    NR+S+G+QS 
Sbjct: 60  PSLLDFDDLSRIYESINKCFILAPGAEVTIECNADDVDSDFVKTIRCFPFNRVSVGIQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++ LRFL R H++ +A  ++  L  N F  +S DL+Y+LP QT   W   +  ALS  +
Sbjct: 120 DDRELRFLNRRHDSRQAKDSVKMLQDNGFSNISVDLMYSLPNQTAESWNRTISEALSLDI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L  EKGT    M + G +   +E  ++  + + ++     G   YEISN +  
Sbjct: 180 QHISAYSLMYEKGTKLRSMLESGQITAVAEEDSLLFFKILRNELLDKGFEHYEISNFALP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              ++HN  YW    YIG+G  AHS   V        I  + ++        G    E+E
Sbjct: 240 DFYAVHNSGYWNGEKYIGVGASAHSYNGVSRQWNVADIAAYCQAV-----DRGETYFEQE 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRLR 377
            L+   + +EF+ + LR  +GI +   E L G  +   C  N  +  +  +  +  +R+ 
Sbjct: 295 QLTVTDRYNEFMFLSLRTAKGIDLCRLERLFGGGMLKYCMVNADKFLKNNLLTIVDNRMY 354

Query: 378 CTQRGMTMLDSVIANL 393
            T+ G+ + D ++++L
Sbjct: 355 LTEEGIFVSDGIMSSL 370


>gi|296327466|ref|ZP_06870012.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296155292|gb|EFG96063.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 367

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 197/376 (52%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E++ + ++        +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGTDSQIEKYVNYLLKEIEIYSKEYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P N    L+ I   ++   N EITIE NP +V+ N  + YRK G+NR+S+G+Q
Sbjct: 65  GTPSLL-PINS---LEKILSKFSYDKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  + +L+ LGR H++ EAI   +LAR   F  +S D++++LP QT++  + +L++ +S 
Sbjct: 121 TFNDDNLKVLGRIHSSQEAIEVYNLARECGFDNISLDIMFSLPYQTLSMLQNDLEKLVSL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HN  YW    Y+G+G  A   +    ++   ++    + +   + +N   + E
Sbjct: 241 KKDFESRHNSTYWENKKYLGVGLSAAGYLDNVRYKNFFNL----KDYYNNLDRNILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+ E       ++G RL   I + + + L       +C  +L ++G++   +   + 
Sbjct: 297 KEILTEEDIEQYRYLVGFRLLNKIIIPNEKYLE------KC-MSLCKEGYLLEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I+N 
Sbjct: 349 LSHKGLMLFNDFISNF 364


>gi|229062015|ref|ZP_04199341.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH603]
 gi|228717324|gb|EEL68997.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH603]
          Length = 379

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 177/363 (48%), Gaps = 26/363 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++Q    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLQYLEKEIINTVQKVPFESMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKQLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRRHTREDAFLAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       +G + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKNGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KVGSHRVAIS-IEKHPESWLKMVR 309
           S    ES HNL YW   +Y G G GAHS V       VG  +   + I++    +L +  
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGPLKQYFTKIDETGFPYLDV-- 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
              HAV EKE +  E      L +GLR  +G+S  +++      +D    + L   Q QG
Sbjct: 300 ---HAVTEKEKMEEE------LFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQG 350

Query: 367 FIE 369
            +E
Sbjct: 351 LLE 353


>gi|94986421|ref|YP_605785.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Deinococcus geothermalis DSM 11300]
 gi|94556702|gb|ABF46616.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Deinococcus geothermalis DSM 11300]
          Length = 403

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 199/402 (49%), Gaps = 31/402 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L AY   +    S    +YVH PFC   CPYCDF+   RR  + ++   +      Q   
Sbjct: 18  LPAYPAPVPALDSTVRHLYVHVPFCPTICPYCDFHVLTRRAGLVEKYLERVEEEAAQLAA 77

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNN 121
           + T    + +++ GGGTPS +    I  +   I ++  W     +E T+E NP +V    
Sbjct: 78  EYT--VDLDTVYIGGGTPSFLRDAEITALAQSIRRHLGW---GRLENTLEINPGTVSAGR 132

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
              +R+ G +R S+GVQSL++ +LRFLGR H+A +A  A+        R+S DLI A+P 
Sbjct: 133 AALWRELGFDRASVGVQSLDDATLRFLGRQHDARQAQEAVTTLVETGLRVSGDLITAVPG 192

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q + +   +++  +   V H+S Y LTIE GT F +       V   E+     +  T+ 
Sbjct: 193 QPLAE---DIRGLVDLGVGHVSAYTLTIEPGTEFARRG-----VTVEEDDERAGFTQTEE 244

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +A G   YE+SN++  G ES HNL YW    Y+G+GPGA      G + VA   +  P
Sbjct: 245 LLTALGFTRYEVSNYARPGQESRHNLAYWHNRTYLGLGPGA-----AGHYPVAQCQQSLP 299

Query: 302 ESWLKMVRKNGHAVV-------EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            S L + R N H          E + + +E+   + L MGLRLREG+++ D    +G N+
Sbjct: 300 SSPLTLRRTNPHLHAWLTGEQGEMQLVDAEEYVTDALFMGLRLREGVNLADLTRRSGLNI 359

Query: 355 DIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                  +    R+G +  ++  RLR T  G   L+ V+A+ 
Sbjct: 360 RERYASAIAANVRRGLLV-LEGERLRATPPGWWTLNQVVADF 400


>gi|19703895|ref|NP_603457.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714059|gb|AAL94756.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 365

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 196/376 (52%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E +I   L E++ + ++        +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGTDSQIEKYINYLLKEIEIYSKEYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P N    L+ I   ++   N EITIE NP +V+ N  + YRK G+NR+S+G+Q
Sbjct: 65  GTPSLL-PINS---LEKILSKFSYDKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  + +L+ LGR H++ EAI   +LAR   F  +S D++++LP QT++  + +L++ +S 
Sbjct: 121 TFNDDNLKVLGRIHSSQEAIEVYNLARECGFDNISLDIMFSLPYQTLSMLQNDLEKLVSL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HN  YW    Y+G+G  A   +    ++   ++    + +   + +N   + E
Sbjct: 241 KKDFESRHNSTYWENKKYLGVGLSAAGYLNNVRYKNFFNL----KDYYNNLDRNILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+ E       ++G RL   I +   + L       +C  +L ++G++   +   + 
Sbjct: 297 KEILTEEDIEQYRYLVGFRLLNKIIIPSEKYLE------KC-MSLCKEGYLLEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I+N 
Sbjct: 349 LSHKGLMLFNDFISNF 364


>gi|78186110|ref|YP_374153.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium luteolum DSM 273]
 gi|78166012|gb|ABB23110.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium luteolum DSM 273]
          Length = 371

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 168/329 (51%), Gaps = 15/329 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSI 74
           L +YVH PFC K+CPYCDF      Y V     ++SF      E      L   +SI +I
Sbjct: 2   LSLYVHIPFCRKRCPYCDF------YLVSGTGLLESFFLALEKETAAKADLFKAQSIGAI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTPSL   + +   L+ +A   +    +EI +EANP   +        +AGV RIS
Sbjct: 56  HFGGGTPSLAPARLLGRWLEQVAGLASFEEGIEIALEANPE--DAAALPELSQAGVTRIS 113

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS     LR LGR H+  E   A+  A  +F  +S DLI  +P + +  W+ +L  A
Sbjct: 114 LGVQSFSASKLRALGRAHSPVEGAEAVRAASALFGSLSVDLICGVPGEDLPAWQSDLSTA 173

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S +  H+S+Y L++E  T+ ++  + G + +P + +  D Y   Q++  A G   YEIS
Sbjct: 174 ISLSPHHVSVYMLSVEPKTIMHRDVQAGSVSVPGDALQADCYRHAQNVLPAAGFVQYEIS 233

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +    +S +NL  W    YIG GP AHS ++  S  V ++   +  S    + + G A
Sbjct: 234 NFALPSHQSRYNLASWERQPYIGFGPSAHSFIRSPSGEVRMA---NTPSLSDYLLRPGSA 290

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISV 343
              +E L   ++  E + + LR+  G+ V
Sbjct: 291 EGFREELGGRERFIEEVFLTLRINRGLDV 319


>gi|282908903|ref|ZP_06316721.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327167|gb|EFB57462.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 297

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/266 (37%), Positives = 146/266 (54%), Gaps = 8/266 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +  + +   E ++ + +TEM   +     R++ +++ GGGTP
Sbjct: 18  YIHIPFCVRICTYCDFNKYFIQNQPVDE-YLDALITEMSTAKY----RNLKTMYVGGGTP 72

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+ +
Sbjct: 73  TALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFK 130

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   + 
Sbjct: 131 PELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQ 190

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN +  G
Sbjct: 191 HISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDG 250

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRV 286
            ES HN  YW   +Y G G GA   V
Sbjct: 251 HESEHNKVYWFNEEYYGFGAGASGYV 276


>gi|229098788|ref|ZP_04229726.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-29]
 gi|228684632|gb|EEL38572.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-29]
          Length = 379

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFTNINIDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 298 DVHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNIEMDQVFAKQLQGNQEQGLLEERD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GYVRLTRKGKLLGNEVFQSFLI 378


>gi|314933756|ref|ZP_07841121.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus caprae C87]
 gi|313653906|gb|EFS17663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus caprae C87]
          Length = 374

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 179/335 (53%), Gaps = 12/335 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   + ++ + + EMQ    +   R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFID-KQPVDEYLDALIKEMQ----VENNRKLETMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T+    E + EANP  +        +K GVNRIS+GVQ+ +
Sbjct: 62  TALNIVQLEKLLKAINNTFTIHG--EYSFEANPDELTYEKVALLKKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR H  ++  +A++ AR      +S DL+Y LP+Q++  ++  L+ AL   +D
Sbjct: 120 PELLEILGRTHKTNDIYSAVNNARKAGINSISLDLMYHLPQQSLEDFKQSLELALEMDID 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y           L+ YEISN    G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGHLKLPNEDLGADMYQYLMKRLEDSNLNQYEISNFGKKG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     ++   H   ++K +  N   ++ K  
Sbjct: 240 HESTHNKVYWLNEEYYGFGAGASGYVD-GVRYTNLNPVNH---YIKAIYNNEEPILTKNT 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            + E++ +E + +GLR+ +G+S+  ++   G N++
Sbjct: 296 PTFEERMEEEMFLGLRMNQGVSISRFKRKFGINIE 330


>gi|223044366|ref|ZP_03614400.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus capitis SK14]
 gi|222442235|gb|EEE48346.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus capitis SK14]
          Length = 374

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 179/335 (53%), Gaps = 12/335 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   + ++ + + EMQ    +   R + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFID-KQPVDEYLDALIKEMQ----VENNRKLETMYVGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T+    E + EANP  +        +K GVNRIS+GVQ+ +
Sbjct: 62  TALNIVQLEKLLKAINNTFTIHG--EYSFEANPDELTYEKVALLKKYGVNRISMGVQTFK 119

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR H  ++  +A++ AR      +S DL+Y LP+Q++  ++  L+ AL   +D
Sbjct: 120 PELLEILGRTHKTNDIYSAVNNARKAGINSISLDLMYHLPQQSLEDFKQSLELALEMDID 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  D+Y           L+ YEISN    G
Sbjct: 180 HISSYGLILEPKTQFYNMYRKGHLKLPNEDLGADMYQYLMKRLEDSNLNQYEISNFGKKG 239

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     ++   H   ++K +  N   ++ K  
Sbjct: 240 HESTHNKVYWLNEEYYGFGAGASGYVD-GVRYTNLNPVNH---YIKAIYNNEEPILTKNT 295

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            + E++ +E + +GLR+ +G+S+  ++   G N++
Sbjct: 296 PTFEERMEEEMFLGLRMNQGVSISRFKRKFGINIE 330


>gi|298383728|ref|ZP_06993289.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           1_1_14]
 gi|298263332|gb|EFI06195.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           1_1_14]
          Length = 376

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 187/379 (49%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++ +   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTRYVHALCHELGMRKEYLKGEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E  +   I + I +N+ +    EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEEADFKRIFETIRENYGMEHCREITLEANPDDLSQEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +LR L R HN+  AI A+   R   F  +S DLIY LP +T  +WE +L++A+   
Sbjct: 121 FDDTTLRLLKRRHNSQTAIEAVRRCREAGFQNISIDLIYGLPGETKGRWENDLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT E+ T  Y M K   +    E+ ++  + L        G   YEISN   
Sbjct: 181 VEHISAYHLTYEEDTPIYNMLKQHQIEEVDEDSSLQFFTLLIEHLQNAGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN +YWR   Y+G GP AHS           SI    + ++K + +N     E 
Sbjct: 241 PDKYSRHNTSYWRGIPYLGCGPSAHSFNGATREWNVSSI----DLYIKGIERNQRD-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFS 374
           E L    + +EF++  +R   G  ++  +   G  L   C +      ++E     +   
Sbjct: 296 ENLDQTTRYNEFIITTIRTVWGTPIEKLKQEFGNELWEYCRK--MSAPYLENGKLVIHEG 353

Query: 375 RLRCTQRGMTMLDSVIANL 393
            LR T+ G+ + DS++++L
Sbjct: 354 ALRLTREGIFISDSIMSDL 372


>gi|295102754|emb|CBL00299.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii L2-6]
          Length = 360

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 194/380 (51%), Gaps = 26/380 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SLG+Y+H P+C  KC YCDF S   +  V +  ++ + L E+        P    +++FG
Sbjct: 2   SLGLYLHIPYCFSKCRYCDFYSAPGQRGVPRA-YVDALLRELSRFAP-DAPLRPDTLYFG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P + A +              EIT+EANP +V  ++ + +R+AGVNRIS GV
Sbjct: 60  GGTPSLLDPADAARL----IAAAQPLPGAEITLEANPETVTEDSLRAFREAGVNRISFGV 115

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L+ LGR H A +A AA   AR   F  +S D++ ALP  T T+++  L+    
Sbjct: 116 QSARDSQLKTLGRPHTAKQARAAFAAARRAGFENLSGDIMLALPHYTQTEFDETLELIED 175

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L IE  + F +   +G   LP+ + A D Y         HG   YEISN 
Sbjct: 176 GGAAHISAYLLKIEPDSAFGRTPPEG---LPTSDEAADFYLYAVEQLEHHGYRQYEISNF 232

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW  GDY+GIGP AHS   +G  R       +P      +R     V+
Sbjct: 233 ARPGYEGKHNLIYWDCGDYLGIGPAAHS--CMGGKRF-----YYPADTEAFLRDEAAPVM 285

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
           +         A+++L++ LRLR+G+S+ +++   GR      +   +N  + G+      
Sbjct: 286 D-----GGCGAEDYLILQLRLRKGLSLDEYKKRYGREFSTTQLAFVQNCVKSGYA-NFDG 339

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L  T  G+ + +S++A L
Sbjct: 340 HTLALTPAGLIVQNSILAEL 359


>gi|167754055|ref|ZP_02426182.1| hypothetical protein ALIPUT_02343 [Alistipes putredinis DSM 17216]
 gi|167658680|gb|EDS02810.1| hypothetical protein ALIPUT_02343 [Alistipes putredinis DSM 17216]
          Length = 376

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 167/340 (49%), Gaps = 21/340 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSISS 73
           G+Y H PFC + C YCDF      +K  +   + S L  M   R+L G       R I +
Sbjct: 3   GLYFHIPFCRRICAYCDF------FKSAEVGRVDSVLDAMG--RELDGAVDWLADRRIRT 54

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL +P  +  + D  A     S   E T+EANP  +     +   + G NR+
Sbjct: 55  VYFGGGTPSLCDPARLQGLADRAATLLDCSGVEEFTVEANPDDMTEEWLEALARTGANRL 114

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS ++  LR + R H  ++A+ A+  A+   F  ++ DLI+ +P       +  L+
Sbjct: 115 SVGVQSFDDDELRLMNRRHTGAQAVEAVRRAQAAGFANLTIDLIFGVPGFGGKVLQRNLE 174

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  V H+S Y LT+EK T F +  + G      E V+   Y       +  G   YE
Sbjct: 175 QALALGVQHISAYHLTVEKNTAFGRRLERGRFSEVDEQVSEREYLEVHRTLTGAGFEHYE 234

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN++  G  + HN  YW   +Y+GIGP AHS         A SI+ +      +     
Sbjct: 235 VSNYALPGCRARHNAAYWSGDEYLGIGPAAHSFNGKSRRWAAASIDGY------LAGAGT 288

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
            A+ E+E L+   + +E+LM  LR  EG+ +   E   G+
Sbjct: 289 EAIYEQERLTERDRYNEYLMTRLRTAEGLELATVETCFGK 328


>gi|42783444|ref|NP_980691.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 10987]
 gi|42739373|gb|AAS43299.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           ATCC 10987]
          Length = 378

 Score =  186 bits (471), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 183/382 (47%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         +  VNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGEVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 356 GYVRLTRKGKLLGNEVFQSFLI 377


>gi|262282906|ref|ZP_06060673.1| coproporphyrinogen III oxidase [Streptococcus sp. 2_1_36FAA]
 gi|262261158|gb|EEY79857.1| coproporphyrinogen III oxidase [Streptococcus sp. 2_1_36FAA]
          Length = 376

 Score =  186 bits (471), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 201/373 (53%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+A V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLQAV-EVGNARVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   +   +
Sbjct: 298 VLTLKEKIEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVAELTEQGLLVPDR-DIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|256844914|ref|ZP_05550372.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|256718473|gb|EEU32028.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
          Length = 367

 Score =  186 bits (471), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 195/376 (51%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E+  + ++        +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   +    L+ I   ++   N EITIE NP +V+VN  + Y+K G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDS----LEKILSKFSYDKNTEITIEVNPKTVDVNKLKEYKKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +  +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT+   + +L++ ++ 
Sbjct: 121 TFDNNNLKVLGRIHNSQEAIEVYNLARECGFENISLDIMFSLPNQTLAMLQNDLEKLVNL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW   +Y+G+G  A   +    ++   ++    + +   + K+   + E
Sbjct: 241 KKGFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFFNL----KDYYNNLDKDILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+ E       ++G RL   I +   + L        C  +L ++G++   +   + 
Sbjct: 297 KEILTQEDIEQYRYLVGFRLLNKIIIPSEKYLE------RC-VSLYKEGYLIEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I+N 
Sbjct: 349 LSHKGLMLFNDFISNF 364


>gi|294782617|ref|ZP_06747943.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481258|gb|EFG29033.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
          Length = 367

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 193/376 (51%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E+  + +         +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGTDNQIEKYVNYLLKEIDIYSKNYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   ++  IL      ++   N EITIE NP +V++N  + YR  G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDSLKRIL----SKFSYDENTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   ++L+ LGR HN+ EAI   ++AR + F  +S D++++LP QT+   +++L++ +  
Sbjct: 121 TFNNENLKILGRIHNSEEAIEVYNMAREVGFKNISLDIMFSLPNQTLEMLKIDLEKLILL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L      +   +Y        + G   YEISN S
Sbjct: 181 NPEHISIYSLIWEEGTKFFRDLKAGKLKETDNELEATMYEYIIDYLKSKGYGHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E+ HN  YW   +Y+G+G  A     +G+ R       H + +   + KN   V E
Sbjct: 241 KKDFEARHNSIYWENKNYLGLGLSAAGY--LGNLRYKNFF--HLKDYYDKLDKNVLPVDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+         ++G RL     +   E L       +CE  L+++ ++ + +   + 
Sbjct: 297 KEVLTEADIEQYRYLVGFRLLNNPLIPSKEYLE------KCEI-LEKEAYLVKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  IAN 
Sbjct: 349 LSSKGLMLFNDFIANF 364


>gi|322689082|ref|YP_004208816.1| coproporphyrinogen III oxidase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460418|dbj|BAJ71038.1| putative coproporphyrinogen III oxidase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 469

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 163/322 (50%), Gaps = 16/322 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q      +  P  +
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIAEP-PV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++  +LD + K W ++ + EIT EANP +V           G  
Sbjct: 63  STVFFGGGTPTILAARDLVAMLDAVRKIWGIAPDAEITTEANPDTVNEYYINELAAGGFT 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   +
Sbjct: 123 RVSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTSV 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  Y
Sbjct: 183 TTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G ES HNL YWR  D+ G+GPGAH      SH  A++   HP+S        
Sbjct: 243 EVSNWARPGYESQHNLGYWRNVDWAGLGPGAH------SHYNAVTEADHPQSASLTAPAG 296

Query: 312 GHAVVEKEFLSSEQQADEFLMM 333
           G         S++ QA+  L M
Sbjct: 297 GGKSEAIASASADGQANAELGM 318



 Score = 43.5 bits (101), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI-------SVKDWEMLAG- 351
           HP  W   + +N     + E ++ E+  +E +M+GLRL EG+       ++ D  M +  
Sbjct: 359 HPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHEGLDLDRINRAINDAGMSSTP 418

Query: 352 ---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              RN+ ++    +  +G I      R+  T+RG  + DSVI
Sbjct: 419 QTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLLNDSVI 460


>gi|242373888|ref|ZP_04819462.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348442|gb|EES40044.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W1]
          Length = 382

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 194/374 (51%), Gaps = 20/374 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   + ++ + + EMQ    +   R + +++ GGGTP
Sbjct: 15  YIHIPFCVRICTYCDFNKYFID-KQPVDEYLDALIKEMQ----VNNNRQLQTMYVGGGTP 69

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +  +L  I   +T+S   E + EANP  +        ++ GVNRIS+GVQ+ +
Sbjct: 70  TALNLTQLEKLLKAINNTFTISG--EYSFEANPDELTYEKVALLKRYGVNRISMGVQTFK 127

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR H   +   A+  AR +    +S DL+Y LP+QT+  ++  L+ AL   +D
Sbjct: 128 PELLEILGRTHKTEDIYKAVDNARKVGIESISLDLMYHLPQQTLDDFKQSLELALKMDID 187

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  ++Y           L  YEISN   +G
Sbjct: 188 HISSYGLILEPKTQFYNMYRKGHLKLPNEDLGAEMYQYLMQRLEQSNLKQYEISNFGKIG 247

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA   V  G     ++  +H   ++  + KN   ++ +  
Sbjct: 248 HESTHNKVYWLNEEYYGFGAGASGYVD-GVRYTNLNPVRH---YIDAINKNEQPILTQTE 303

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQRQGFIERVQFSR 375
            + E++ +E + +GLR+ +G++ + ++   G  L IE        NL  +  +++ Q   
Sbjct: 304 PTFEEKMEEEMFLGLRMNQGVNTERFKYKFG--LPIESVFGQTIENLLGRNLLQKQQ-QN 360

Query: 376 LRCTQRGMTMLDSV 389
           +  T+RG  + + V
Sbjct: 361 ISLTERGKVIGNEV 374


>gi|229493209|ref|ZP_04387001.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodococcus erythropolis SK121]
 gi|229319940|gb|EEN85769.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodococcus erythropolis SK121]
          Length = 408

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 192/394 (48%), Gaps = 26/394 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQL 65
           ++ G G    G+Y+H PFC  +C YCDFN++    ++G     QS+L     E+    ++
Sbjct: 23  SLEGVGKRPFGIYIHVPFCATRCGYCDFNTYTAG-ELGTSASPQSWLEGLRRELDLAAEM 81

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           TG  +  ++F GGGTPSL+    +  +L  +  ++ ++   E+T E+NP S     F   
Sbjct: 82  TGAPAAETVFVGGGTPSLLGGDGLTDVLSAVRSSFGLAPGAEVTTESNPESTSPEFFGAL 141

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R AG  RISLG+QS  +  L+ L R H    A+AA   AR   F  ++ DLIY  P +  
Sbjct: 142 RSAGFTRISLGMQSAAQHVLKILDRTHTPGRAVAAAKEARAAGFSHVNLDLIYGTPGERD 201

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    S  S
Sbjct: 202 QDLDASLDAVLSADVDHVSAYALIVEDGTAMARKVRRGELPAPDDDVLASRYERIDSRLS 261

Query: 245 AHGLHAYEISNHSFLGAESL--------HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
             GL  YE+SN  +  AE+         HN+ YW  GD+ G GPGAHS V      V   
Sbjct: 262 EAGLGWYEVSN--WAKAETADSGDTRCRHNIGYWDGGDWWGAGPGAHSHVG----GVRWW 315

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP  + + +      V   E L++E +  E +M+  RLR G+ +   E+ A   L  
Sbjct: 316 NVKHPARYAEQLALGELPVGGSEELTAEDEHMERVMLTARLRTGLPLS--ELSASERLSA 373

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           E    +   G +  ++   +  T RG  + D+VI
Sbjct: 374 E---QVVVDG-LAVIENDHVVLTDRGRLLADAVI 403


>gi|291563970|emb|CBL42786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [butyrate-producing bacterium SS3/4]
          Length = 379

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 182/337 (54%), Gaps = 17/337 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFCV+KC YCDF S    +   QE    + +    ++  M +  G   + +IF G
Sbjct: 7   LYLHMPFCVRKCAYCDFLS----FPTDQETQNLYTRRLREDIDAMGKKYGDIPVDTIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+ +   I  I++ + K + V+   EI++EANP +V       YR+AG+NR+S G+
Sbjct: 63  GGTPSVPDSALIVGIMEHVRKAFHVAEGAEISMEANPGTVTREKLTDYRRAGINRLSFGL 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L+ LGR H  +E + + HLAR   F  ++ DL+ ALP QT   W+  L+R   
Sbjct: 123 QSANDRELKLLGRIHTWAEFLESFHLARECGFTNINIDLMSALPGQTRESWKDTLKRVTD 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              +H+S Y L IE GT F + +  ++G  +LP E+   ++Y+ T+      G   YEIS
Sbjct: 183 LNPEHISAYSLIIEDGTPFGEKYGSEEGRKLLPDEDSEREMYHETKRFLQDCGYERYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G    HN+ YW    Y+G+G GA S +      V   ++++ E    M       
Sbjct: 243 NYAKPGRACRHNIGYWTGLPYLGLGLGASSYMDGCRFAVNSDMKQYLEEKPGMFTD---- 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            VEK  L+ +   +EF  +GLR+  G+S+ ++E   G
Sbjct: 299 -VEK--LTKKDMEEEFFYVGLRMTAGVSLPEFERRFG 332


>gi|229198445|ref|ZP_04325149.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1293]
 gi|228584948|gb|EEK43062.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1293]
          Length = 378

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 184/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLNIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKGNNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDEIGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 297 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 356 GYVRLTRKGKLLGNEVFQSFLI 377


>gi|125624230|ref|YP_001032713.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493038|emb|CAL98001.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071010|gb|ADJ60410.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 379

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 175/337 (51%), Gaps = 18/337 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSI 71
           Q  NS   Y H PFC   C YCDF    +    GQ  + +I++ + E Q ++     + +
Sbjct: 3   QKPNS--AYFHIPFCSHICYYCDF---AKVLMTGQPVDAYIEAIIEEFQSLK----IKKL 53

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTPS++  Q +  +L  IA    +    E T+EANP  +  +  +    + VN
Sbjct: 54  KTVYIGGGTPSVLSAQQLERLLTAIADQLDLDFLEEFTVEANPGDLSDDVIKVLAHSAVN 113

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEME 190
           RISLGVQ+     L+ +GR HN ++   +I  L R  F  ++ DLIYALP QTM   + +
Sbjct: 114 RISLGVQTFNNTLLKKIGRTHNEAQVYDSIERLKRAGFENITIDLIYALPGQTMEMVKSD 173

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + L+  + H++LY L +E  T+F    + G L LPSE+   D+Y     I + HG   
Sbjct: 174 VDKFLALDLPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAQHGYQH 233

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN    G ES HN+ YW   +Y GIG GA   +    ++    +      +LK    
Sbjct: 234 YEVSNFGRPGFESKHNITYWDNEEYYGIGAGASGYLSGVRYKNYGPV----HHYLKAAAN 289

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           +    V +E LS + Q +E + +GLR + G+ V+ +E
Sbjct: 290 DKR--VNEEVLSKKSQIEEEMFLGLRKKSGVLVEKFE 324


>gi|172037002|ref|YP_001803503.1| coproporphyrinogen III oxidase [Cyanothece sp. ATCC 51142]
 gi|171698456|gb|ACB51437.1| oxygen independent coprophorphyrinogen III oxidase 2 [Cyanothece
           sp. ATCC 51142]
          Length = 412

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 174/332 (52%), Gaps = 11/332 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSI 74
           +  Y+H PFC ++C YCDF   V   +  + Q + I  ++  +    ++T      + +I
Sbjct: 7   VSAYLHIPFCRRRCYYCDFPISVLGDKVDINQSSSIAEYVEFLCEEIKITPSCHLPLETI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P  +  IL  + +++ ++S+ EI++E +P +  +     Y+K GVNR S
Sbjct: 67  FFGGGTPSLLPPPYLEKILLTLDEHFGINSDAEISLEMDPGTFTLEQLSDYKKLGVNRFS 126

Query: 135 LGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           LGVQS +++ L   GR H   +  +AI  IH  +N     S DL+  LP Q +  W++ L
Sbjct: 127 LGVQSFDDELLEKCGRFHRYKDIGQAIDFIH--QNKIKNFSLDLMSGLPYQNLETWKLSL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q+A+     H+S Y L +E  T F K +K G   LP++     +Y +TQ   +  G   Y
Sbjct: 185 QQAIRINPTHISCYDLVLEPVTAFGKQYKPGKFPLPNDQDTSQMYTITQQKLTEAGYEHY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G +  HNL YW    Y G G GA S              K    W+  ++++
Sbjct: 245 EISNYAKSGYQCRHNLVYWENKPYYGFGMGAASYTN-NQRFTRPKTRKSYYEWINQLKQS 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           G+++     LS      E LM+GLRL++G+ +
Sbjct: 304 GYSIASPN-LSKVDILLESLMLGLRLQKGVDL 334


>gi|228993060|ref|ZP_04152983.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           pseudomycoides DSM 12442]
 gi|228766708|gb|EEM15348.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           pseudomycoides DSM 12442]
          Length = 378

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 166/339 (48%), Gaps = 9/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     ++ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFENMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +           GVNRIS GV
Sbjct: 61  GTPTALNVEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L+ +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E     +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTIFYNLMNKGKLRLPGEEHEARMYEIVMDEMENHGYKQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW    Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKEGYESRHNLTYWNNEQYYGFGAGAHSYVN-GERIQNVGPLKQ---YFSKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   ++ +++ +E L +GLR  +G+S   ++   G  +D
Sbjct: 297 DVHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMD 335


>gi|218899485|ref|YP_002447896.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           G9842]
 gi|228967386|ref|ZP_04128420.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218542424|gb|ACK94818.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           G9842]
 gi|228792312|gb|EEM39880.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 379

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQRVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 298 DVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GYVRLTRKGKLLGNEVFQSFLI 378


>gi|194334815|ref|YP_002016675.1| oxygen-independent coproporphyrinogen III oxidase [Prosthecochloris
           aestuarii DSM 271]
 gi|194312633|gb|ACF47028.1| oxygen-independent coproporphyrinogen III oxidase [Prosthecochloris
           aestuarii DSM 271]
          Length = 374

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 192/378 (50%), Gaps = 11/378 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L  YVH PFC  +C YCDF    R  +  QE F ++   E +    L   R+I S+ FGG
Sbjct: 2   LHCYVHIPFCRNRCSYCDFFLITR--EGFQEPFFRALREETRSRAILLEGRTIRSVHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P+++   L+ +A   T    +EIT+EANP  +   +   +   GVNR+S+G+Q
Sbjct: 60  GTPSLVDPRHLEAWLNQVAGYATFHPELEITLEANPEDLTPQSLALWSSIGVNRLSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR+H+A  A      A   F  +S DLI  +  ++   W  +L  ALS+ 
Sbjct: 120 SYNSRKLHALGRDHDALCARRVTGEAMERFRNVSVDLICGVEGESSALWGADLDDALSFG 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS+Y LT+E  T   +    G + +P E     +Y++     S+ G   YE+SN + 
Sbjct: 180 LQHLSVYMLTVEPSTRLARDVSKGLVQVPGEGELASMYSIASERLSSSGFEHYEVSNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N+  W+   Y+G GP AHS   +G+   A     +  S  + + +      ++
Sbjct: 240 AGCFSRYNMGCWQRESYLGFGPSAHSLYTLGA---AEWRSANVTSLTRYIAEPRELSSQR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGIS---VKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           EFLS + + +E + + LRL+ G+    ++ W     R +D   +   QR G+++ V    
Sbjct: 297 EFLSEKDRRNEQIFLSLRLKTGLDAGLLQRWHSFDPR-IDAAVDAFRQR-GWLD-VNGRT 353

Query: 376 LRCTQRGMTMLDSVIANL 393
           L+ T++G    D +   L
Sbjct: 354 LKVTRKGFLFADLIAEEL 371


>gi|88801304|ref|ZP_01116832.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaribacter irgensii 23-P]
 gi|88781962|gb|EAR13139.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaribacter irgensii 23-P]
          Length = 376

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 199/380 (52%), Gaps = 17/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +E  + S + E++  ++      I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACFYCDF--HFSTSLKKKEEMLVSLVREIKLRKEELKGAIIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  ++  +  N+ V  N EIT+EANP  +         K+ +NR+S+GVQS
Sbjct: 61  TPSVLSTEEIRGLIAAVYLNFEVIENPEITLEANPDDLSEEKLIALSKSPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA+EA  ++ LA   F  +S DLIY +P  T  +W   ++ ALS+ +
Sbjct: 121 FFEKDLKLMNRAHNAAEAKKSLALATRYFDNISLDLIYGIPGCTNEEWRTNIKTALSFGI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNHSF 258
            H+S Y L +E  T    M + G +    +      +  LT+ + +A  +H YE+S+   
Sbjct: 181 PHISSYALVVEPYTALKTMIEKGKIKNVDDTKTQQQFQILTKELATAGFIH-YELSSFGK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            G    +N  YW    Y+GIGP AHS   K  S  V     K+   ++K +++N   ++E
Sbjct: 240 EGFFGKNNSAYWFGVAYLGIGPSAHSFDGKQRSWNV-----KNNVKYIKAIQENA-LLIE 293

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQF 373
           +E LS   + +EF+M GLR   G+S+   +   G       E++ ++   IE     V+ 
Sbjct: 294 RETLSLTDRYNEFVMTGLRTMWGVSLDKIKDKFGEKYLNYLEKHSKKH--IEEALLFVEN 351

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L+  ++G  ++D + A+L
Sbjct: 352 GTLKTRKKGWFLVDGIAADL 371


>gi|88855044|ref|ZP_01129709.1| oxygen-independent coproporphyrinogen III oxidase protein [marine
           actinobacterium PHSC20C1]
 gi|88815572|gb|EAR25429.1| oxygen-independent coproporphyrinogen III oxidase protein [marine
           actinobacterium PHSC20C1]
          Length = 416

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 159/336 (47%), Gaps = 17/336 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           VY+H PFC  +C YCDFN++        +R     E   +  L      +     R  S+
Sbjct: 32  VYIHVPFCRVRCGYCDFNTYTSEELRGAKRSDYATEAIAEMSLASGVLAQAGVALREAST 91

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP+L+   ++  +L    + W  +S+VE+T EANP SV+       + AG  R+
Sbjct: 92  VFFGGGTPTLLPVTDLTRMLTAARETWGFTSDVEVTTEANPDSVDREYLLALKDAGFTRV 151

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S G+QS     L  L R H+       +  AR +   +S DLIY  P +++  WE  L  
Sbjct: 152 SFGMQSAVPHVLATLERTHDPERVPHVVKWAREVGLDVSLDLIYGTPGESLADWERSLDH 211

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +S   DH+S Y L IE GT      + GD+    +++  D+Y L +    A G   YE+
Sbjct: 212 VISQNPDHVSAYALIIETGTKLAGQIRRGDVAPVDDDLQADMYELAEQKLHAAGYEWYEV 271

Query: 254 SN------HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           SN         +   S HNL YW   D+ GIGPGAHS V      V     KHP ++   
Sbjct: 272 SNWAKRTDDPAISNTSRHNLGYWLGNDWWGIGPGAHSHVG----GVRWWNVKHPAAYADR 327

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +         +E L+   +  E +++  R+R G+ +
Sbjct: 328 IAAGHSPAAGRETLADSSKYLEHVLLRARVRNGLHI 363


>gi|296454057|ref|YP_003661200.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296183488|gb|ADH00370.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 476

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 154/292 (52%), Gaps = 16/292 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VY+H PFC+++C YCDFN++          + N+    + EM   +Q      +  P  +
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMALTKQWQLDHGIEEP-PV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGGTP+++  +++  +LD I K W+++ + EIT EANP +V           G  
Sbjct: 63  STVFFGGGTPTILAARDLVAMLDAIRKVWSIAPDAEITTEANPDTVNEYYINELAAGGFT 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   +
Sbjct: 123 RVSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTSV 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  Y
Sbjct: 183 TTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           E+SN +  G ES HNL YWR  D+ G+GPGAH      SH  A++   HP+S
Sbjct: 243 EVSNWARPGYESQHNLGYWRNVDWAGLGPGAH------SHYNAVTEADHPQS 288



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI-------SVKDWEMLAG- 351
           HP  W   + +N     + E ++ E+  +E +M+GLRL EG+       ++ D  M +  
Sbjct: 366 HPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHEGLGLDRINRAINDAGMSSTP 425

Query: 352 ---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              R + ++    +  +G I      R+  T+RG  + DSVI
Sbjct: 426 QTLRTVSVDQLAPMISEGLITVSDNHRVVPTRRGRLLNDSVI 467


>gi|78777851|ref|YP_394166.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM
           1251]
 gi|78498391|gb|ABB44931.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurimonas denitrificans DSM 1251]
          Length = 350

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 185/326 (56%), Gaps = 24/326 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H PFC  KC YC FNS+V ++ + +EN++ +  T++++  +    R  SI S+F GG
Sbjct: 3   LYIHIPFCDSKCSYCAFNSYVDKFHL-KENYMLALSTQLEFELKRFDVRANSIESVFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +EP++   I + +     +  N+EIT EANP+S      +G  + GVNRIS GVQ
Sbjct: 62  GTPSTVEPKHYKAIFEKLKP--YLMDNIEITSEANPNSATCKWLEGMYELGVNRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L+ L R+H+A++A  AI  A+ I F  +S DLIYA    T    + +L+ A S 
Sbjct: 120 SFDKEKLKILNRSHSAAQAKEAILNAKEIGFKNISLDLIYATLGDTKELLKHDLETAFSL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S Y LTIE+ T F     +    + +E +++  + L ++I    G   YEISN  
Sbjct: 180 PINHISAYALTIEERTPF-----ESKPYMSNERLSLTSW-LFKNIKD-RGFLQYEISN-- 230

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F   +S HNL YW Y DYIG+G GA  ++++  +     +E++          N   + +
Sbjct: 231 FGKYKSTHNLGYWLYKDYIGLGSGAVGKLRLQRYYPTSDVEEYI---------NNPTLTK 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV 343
            E LS E +  E + +GLR   G+S+
Sbjct: 282 IESLSDEDKKIEQIFLGLRSCVGVSI 307


>gi|237740281|ref|ZP_04570762.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422298|gb|EEO37345.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 367

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 196/376 (52%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L E+  + +         +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGTDNQIEKYVNYLLKEIDIYSKNYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   ++  IL      ++   N EITIE NP +V++N  + YR  G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDSLKRIL----SRFSYDENTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  +++L+ LGR HN+ EAI   ++AR + F  +S D++++LP QT+   +++L++ +  
Sbjct: 121 TFNDENLKVLGRIHNSEEAIEVYNIAREVGFKNISLDIMFSLPNQTLKMLKVDLEKLILL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++   +Y        + G   YEISN S
Sbjct: 181 NPEHISIYSLIWEEGTKFFRDLKAGKLKETDNDLEATMYEYIIDYLKSKGYEHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E+ HN  YW   +Y+G+G  A     +G+ R       H + +   + KN   + E
Sbjct: 241 KKDFEARHNSIYWENKNYLGLGLSAAGY--LGNLRYKNFF--HLKDYYDKLDKNILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L++        ++G RL     +   E L       +CE  L+++ ++ + +   + 
Sbjct: 297 REELTANDIEQYRYLVGFRLLNKPLIPSKEYLE------KCEI-LEKEAYLVKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  IAN 
Sbjct: 349 LSSKGLMLFNDFIANF 364


>gi|229117814|ref|ZP_04247178.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-3]
 gi|228665611|gb|EEL21089.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-3]
          Length = 379

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYSQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNESRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 298 DVHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNIEMDQVFAKQLQGNQEQGLLEERD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GYVRLTRKGKLLGNEVFQSFLI 378


>gi|228999110|ref|ZP_04158692.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock3-17]
 gi|228760727|gb|EEM09691.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock3-17]
          Length = 378

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 166/339 (48%), Gaps = 9/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     ++ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFENMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +           GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L+ +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E     +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEARMYEMVMDEMENHGYKQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW    Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKEGYESRHNLTYWNNEQYYGFGAGAHSYVN-GERIQNVGPLKQ---YFSKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   ++ +++ +E L +GLR  +G+S   ++   G  +D
Sbjct: 297 DVHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMD 335


>gi|325678497|ref|ZP_08158112.1| putative coproporphyrinogen dehydrogenase [Ruminococcus albus 8]
 gi|324109808|gb|EGC04009.1| putative coproporphyrinogen dehydrogenase [Ruminococcus albus 8]
          Length = 372

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 181/327 (55%), Gaps = 18/327 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH PFC++KCPYC F S +   +   E ++Q+    + + +   G R+  +++ GG
Sbjct: 2   LGIYVHVPFCLRKCPYCSFYS-LPYDEDTAEKYVQAICRNIAYYKD-RGLRA-DTLYLGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + +  IL+   + + +  N EIT+EANP +V+ +  +  R AG NRIS G+Q
Sbjct: 59  GTPSVLTAEQLGRILNECRQVFLLD-NAEITLEANPCTVDEHKMRELRDAGFNRISFGIQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S++   LRFLGR H++S A+ A+  A+   F  +S D++     + +      L+   S 
Sbjct: 118 SVDNDRLRFLGRLHDSSTAVNAVLNAQKAGFENISGDIMLGAANEDINSLCSSLEAICSL 177

Query: 198 AVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + H+S Y L IEKGT FY   +K+   ++  +++  +LY     +    G   YEISN 
Sbjct: 178 PLKHVSAYMLKIEKGTPFYDDKYKN---LIADDDLMSELYLTAVEMLEKKGFKQYEISNF 234

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +S HN  YW+  +YIG GP AHS      +     ++   ES L+        + 
Sbjct: 235 AMDGYQSRHNNKYWQGEEYIGFGPSAHSFFNCVRYFCPPDLKDFIESDLQTCD-----MA 289

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           E    +   +A+E++++GLRLR+GIS+
Sbjct: 290 E----ADPDKAEEYILLGLRLRKGISL 312


>gi|282889589|ref|ZP_06298130.1| hypothetical protein pah_c002o031 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500512|gb|EFB42790.1| hypothetical protein pah_c002o031 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 384

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 192/384 (50%), Gaps = 19/384 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLT--EMQWMR--QLTGPRSISS 73
           + +Y H PFC +KC YC F      Y +  ++ F Q  +   E++W +   L     + S
Sbjct: 8   ISLYFHIPFCSQKCDYCHF------YVLPDKDPFKQQLMEGLELEWKKILPLLSGCEVIS 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTPSL+  ++IA IL  I K   + S  EI++EANP +V     +GY  AG+NR+
Sbjct: 62  IYFGGGTPSLLGIESIAKILSWIEKEGVLHSYAEISLEANPENVNTPLMKGYANAGINRV 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+Q+ +   L+ L R H +  A  A+  +A      +S DL+Y +P QT  QW   LQ
Sbjct: 122 SLGIQTFDPALLKILHRTHTSERAYQAVEEIATAGIRNISVDLMYDIPCQTFDQWVHTLQ 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +   + HLS Y LTIE  T FYK  +    V+P    +  +          HGL  YE
Sbjct: 182 QVVKLPITHLSFYNLTIEPHTKFYKQQEQLKKVVPDPETSFTMLTYGIEQLELHGLKRYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS  +     S HN+ YW    ++G+GP A S       R       H   +++ +RK+ 
Sbjct: 242 ISAFARDACHSRHNVGYWTARPFLGLGPSAFSYWDEERFRNI----AHLGRYVEKLRKDE 297

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIER 370
             V  +E L  E+   E L + LRL +G+++++++   G  +   +E  R L +  F+  
Sbjct: 298 SPVDFREKLGYEEHLRELLAVELRLMKGVNLEEFQNRHGALIHSMLETVRALIQSEFLLE 357

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
                L  +++G    D+V A + 
Sbjct: 358 DNHV-LILSEKGKNFYDTVAAEIV 380


>gi|229081579|ref|ZP_04214076.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-2]
 gi|229180594|ref|ZP_04307936.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 172560W]
 gi|229192528|ref|ZP_04319490.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 10876]
 gi|228590952|gb|EEK48809.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 10876]
 gi|228603018|gb|EEK60497.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 172560W]
 gi|228701735|gb|EEL54224.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-2]
          Length = 379

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     SI +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSIKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  + 
Sbjct: 298 DVHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-ED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GHVRLTRKGKLLGNEVFQSFLI 378


>gi|118618922|ref|YP_907254.1| coproporphyrinogen III oxidase [Mycobacterium ulcerans Agy99]
 gi|118571032|gb|ABL05783.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium ulcerans Agy99]
          Length = 390

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 190/378 (50%), Gaps = 13/378 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            G+Y+H PFCV +C YCDFN++       V  + ++ +  +E++         +++++F 
Sbjct: 21  FGLYLHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLLALRSELELAAARLNAPTVNTVFV 80

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  Q +  +LD +  ++ ++ +VEIT EANP S     F   R AG  R+SLG
Sbjct: 81  GGGTPSLLGGQRLTTLLDMVRDHFVLAPDVEITTEANPESTWPEFFDAIRSAGYTRVSLG 140

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           +QS+  + L  L R H+   A AA   A       ++ DLIY  P +T       +  A+
Sbjct: 141 MQSVAPRVLATLDRVHSPGRASAAAREAFAAGFEHVNLDLIYGTPGETDDDLLRSIDAAI 200

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VDH+S Y L +E GT   +  + G+L     +V    Y L  +  +A GL  YE+SN
Sbjct: 201 EAGVDHVSAYALVVEDGTAMARRVRQGELPPVDNDVLAHRYELADARLTAAGLAWYEVSN 260

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNL YW  G + G GPGAH    VG+ R      KHP ++ +++  +   V
Sbjct: 261 WARPGGECRHNLGYWNGGQWWGAGPGAHG--YVGATR--WWNVKHPNTYAEILAGSSLPV 316

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E L  +    E +M+GLRLR+G+ +    + AG     E  +     G +   +   
Sbjct: 317 AGLERLEEDALHTEEVMLGLRLRQGLPLA--HLDAGER---ERAQAAVADGLLT-AEGDS 370

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T RG  + D+V+  L
Sbjct: 371 VVLTDRGRLLADAVVRTL 388


>gi|255534472|ref|YP_003094843.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Flavobacteriaceae bacterium
           3519-10]
 gi|255340668|gb|ACU06781.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Flavobacteriaceae bacterium
           3519-10]
          Length = 406

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 190/376 (50%), Gaps = 9/376 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC+F  H       ++  + +   E+   +     + + S++FGGGT
Sbjct: 33  IYLHIPFCKQKCSYCNF--HFSTSLKHKDEMMAAMKKEIFLRKDELDSKILKSLYFGGGT 90

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++    +  ++D + K +   S++EIT+EANP  ++    +G  +  +NR+S+G QS 
Sbjct: 91  PSILGADELKSVIDEVLKFFEFDSDIEITLEANPDDLDATFLKGISQTPINRLSIGTQSF 150

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L+ + R HNASEA  +I  A++  F  +S DLIY  P      W+  L  AL+  V
Sbjct: 151 FNDDLKMMNRAHNASEAEGSIKRAQDFGFENISIDLIYGSPTSDFEIWKQNLNMALALEV 210

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   +  +   +  P E    + +         HG   YEISN    
Sbjct: 211 PHISAYALTVEPKTALNQWIQQNKIQAPKEAEQTEEFYYMSDFLKNHGFDHYEISNFGKP 270

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HN  YW+  +Y+G+GP AHS    G +  + +I  + + ++  + +N     E E
Sbjct: 271 GFHSQHNSAYWKSHEYLGLGPSAHSY--NGGNERSWNIANN-QLYINSLNQN-KLPKETE 326

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--GFIERVQFSRLR 377
            LS  +Q +E +M+GLR   G+ + D     G ++    E+  +++    I  V+ + LR
Sbjct: 327 VLSESEQFNEMMMIGLRTLTGVDLADLNNRFGDDVRQHLEKETKQRIADGILTVENNHLR 386

Query: 378 CTQRGMTMLDSVIANL 393
             ++   + D + +++
Sbjct: 387 IPEKHWFLADGIASDV 402


>gi|239637605|ref|ZP_04678577.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus warneri L37603]
 gi|239596823|gb|EEQ79348.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus warneri L37603]
          Length = 377

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 168/317 (52%), Gaps = 9/317 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   + ++ S + EM+  R L    ++++++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFID-KQPVDEYLDSLILEMER-RTLNDNTTLNTMYVGGGTP 64

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  + +  +L  I + +T+    E + EANP  +     +  +  GVNRIS+GVQ+ +
Sbjct: 65  TALNIEQLNKLLSAINRIFTIEG--EFSFEANPDELTFEKVKLLKSYGVNRISMGVQTFK 122

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR H   +   A++ AR      +S DL+Y LPKQT+  +E  L  A+   +D
Sbjct: 123 PELLEILGRTHKTEDIYQAVNNARKAGIESISLDLMYHLPKQTLEDFEDSLNLAMQMDID 182

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  ++Y            H YEISN S  G
Sbjct: 183 HISSYGLILEPKTQFYNMYRKGHLKLPNEDLGAEMYQKLMHKIEDSRFHQYEISNFSIEG 242

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA S    G     ++   H   ++K +      ++ +  
Sbjct: 243 HESEHNKVYWLNEEYYGFGAGA-SGYTNGVRYTNVNPVNH---YIKAIANQEEPILTQTR 298

Query: 321 LSSEQQADEFLMMGLRL 337
            ++ +Q +E + +GLRL
Sbjct: 299 PTATEQMEEEMFLGLRL 315


>gi|198276882|ref|ZP_03209413.1| hypothetical protein BACPLE_03087 [Bacteroides plebeius DSM 17135]
 gi|198270407|gb|EDY94677.1| hypothetical protein BACPLE_03087 [Bacteroides plebeius DSM 17135]
          Length = 377

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 191/378 (50%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S     K  +  ++Q+   E++  +       I +I+FGGG
Sbjct: 3   GIYLHIPFCKRRCIYCDFFSTTENDK--KSTYVQALSKELELRKAYLDGEIIDTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   + + I K +TV+   EITIEANP  +        R    NR+S+G+Q+
Sbjct: 61  TPSQLEGKDFIQLFETIYKIYTVNPEAEITIEANPDDLTPEYIAMLRTLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +LR L R H A++A  A    R   F  +S DL+Y LP +T+  W+ +LQ AL   
Sbjct: 121 FKEDTLRLLHRRHTAAQAQQAYQHCREAGFQNISIDLMYGLPGETLEDWQKDLQTALQMH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  + + +   +    E+++V L+        ++G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWNLKEAHQVEETDEDLSVSLFKELIHTLKSNGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS           S+ ++ +       + G    EK
Sbjct: 241 PGFHSRHNSSYWTGKKYLGCGPSAHSYDGTSRQWNVASLSQYIQGI-----QEGTLNQEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++  LR   GI     +   G  L   C R      +QGF+  +    
Sbjct: 296 EELDLYTRYNDFIITRLRTAYGIPTHILKETFGETLFNYCMRMASPHLKQGFL-TLDNHV 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           ++ T++G+ + D ++++L
Sbjct: 355 MKLTEKGIFISDGIMSDL 372


>gi|260494765|ref|ZP_05814895.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260197927|gb|EEW95444.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 367

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 201/376 (53%), Gaps = 21/376 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
            YVH PFC +KC YCDF S ++      E ++   L E++ + ++    +   +I+FGGG
Sbjct: 7   TYVHIPFCERKCNYCDFTS-LKGSDSQIERYVNYLLKEIEIYSQKYDLSQKQDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+   ++  IL      ++   N EITIE NP +V+ N  + YRK G+NR+S+G+Q+
Sbjct: 66  TPSLLPIDDLKKIL----SKFSYDKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + +L+ LGR HN+ EAI   +LA+   F  +S D+I++LP QT+   + +L++ +S  
Sbjct: 122 FNDDNLKVLGRIHNSEEAIEVYNLAKECGFKNISLDIIFSLPNQTLAMLQNDLEKLVSLN 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNHS 257
            +H+S+Y L  E+GT F++  K G       ++  ++Y  + + + S   +H YEISN S
Sbjct: 182 PNHISIYSLIWEEGTKFFRDLKAGKFKETDNDLEANMYEYIIEYLKSKEYIH-YEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW   +Y+G+G  A   +    ++   ++    + +   + K+   + E
Sbjct: 241 KKGFESRHNSIYWENKNYLGVGLSAAGYLGNVRYKNFFNL----KDYYNNLDKDILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE L+         ++G R+   I+V   + L        C  +L ++G++ + +   + 
Sbjct: 297 KEILTEGDIEQYRYLVGFRILNKITVPSKKYLK------RC-VSLCKEGYLIKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I N 
Sbjct: 349 LSHKGLMLFNDFILNF 364


>gi|183983689|ref|YP_001851980.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium marinum M]
 gi|183177015|gb|ACC42125.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium marinum M]
          Length = 390

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 190/378 (50%), Gaps = 13/378 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            G+Y+H PFCV +C YCDFN++       V  + ++ +  +E++         +++++F 
Sbjct: 21  FGLYLHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLLALRSELELAAARLNAPTVNTVFV 80

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  Q +  +LD +  ++ ++ +VEIT EANP S     F   R AG  R+SLG
Sbjct: 81  GGGTPSLLGGQRLTTLLDMVRDHFVLAPDVEITTEANPESTWPEFFDAIRSAGYTRVSLG 140

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           +QS+  + L  L R H+   A AA   A       ++ DLIY  P +T       +  A+
Sbjct: 141 MQSVAPRVLATLDRVHSPGRASAAAREAFAAGFEHVNLDLIYGTPGETDDDLLRSVDAAI 200

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VDH+S Y L +E GT   +  + G+L     +V    Y L  +  +A GL  YE+SN
Sbjct: 201 EAGVDHVSAYALVVEDGTAMARRVRQGELPPVDNDVLAHRYELADARLTAAGLAWYEVSN 260

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNL YW  G + G GPGAH    VG+ R      KHP ++ +++  +   V
Sbjct: 261 WARPGGECRHNLGYWNGGQWWGAGPGAHG--YVGATR--WWNVKHPNTYAEILAGSSLPV 316

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E L  +    E +M+GLRLR+G+ +    + AG     E  +     G +   +   
Sbjct: 317 AGLERLEEDALHTEEVMLGLRLRQGLPLA--HLDAGER---ERAQAAVADGLLT-AEGDS 370

Query: 376 LRCTQRGMTMLDSVIANL 393
           +  T RG  + D+V+  L
Sbjct: 371 VVLTDRGRLLADAVVRTL 388


>gi|228475950|ref|ZP_04060658.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis SK119]
 gi|314936296|ref|ZP_07843643.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis subsp. hominis C80]
 gi|228269773|gb|EEK11253.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis SK119]
 gi|313654915|gb|EFS18660.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis subsp. hominis C80]
          Length = 373

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 190/375 (50%), Gaps = 18/375 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            Y+H PFCV+ C YCDFN +    K   + +I + + EM+     +  R++ +++ GGGT
Sbjct: 6   AYIHIPFCVRICTYCDFNKYFIN-KQPVDEYISALIKEMKT----SEIRNLETMYVGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +  +L  I   +++    E T EANP  + ++  +     GVNRIS+GVQ+ 
Sbjct: 61  PTALNLKQLETLLKAIQSTFSIKG--EYTFEANPDELTLDKVKLLHSYGVNRISMGVQTF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + + L+ LGR H   +   A+  AR      +S DL+Y LP QT+  +   L RA+   +
Sbjct: 119 KPELLKILGRTHKTQDIYNAVDYARKANIESISLDLMYHLPTQTLDDFSDSLNRAIQMDI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L +E  T FY M++ G L LP+E++  ++Y    ++        YEISN +  
Sbjct: 179 DHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMNVLGETSFKQYEISNFAKS 238

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW   +Y G G GA   V  G     ++   H   ++  +  +   ++   
Sbjct: 239 HHESRHNKTYWLNEEYYGFGAGASGYVN-GERYSNLNPVNH---YINAINNHQRPILTSN 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI-ERVQFSR 375
           F +  ++ +E + +GLR+ +G+    +    G ++D    E   NL+++  + ER   + 
Sbjct: 295 FPTQSERMEEEMFLGLRMNKGVDKVKFLSKFGTSMDKVFGETINNLKKKNLLYERD--NH 352

Query: 376 LRCTQRGMTMLDSVI 390
           +  T RG  + + V 
Sbjct: 353 ISLTNRGKIIGNEVF 367


>gi|167770386|ref|ZP_02442439.1| hypothetical protein ANACOL_01729 [Anaerotruncus colihominis DSM
           17241]
 gi|167667393|gb|EDS11523.1| hypothetical protein ANACOL_01729 [Anaerotruncus colihominis DSM
           17241]
          Length = 369

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/334 (34%), Positives = 171/334 (51%), Gaps = 19/334 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  KCPYCDF S V+      + +I +   E     Q    + + +++FGGGT
Sbjct: 6   LYVHIPFCESKCPYCDFYS-VKADGDLMDRYIGAL--EHALKTQPYKIQRLDTVYFGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  + +  ++D + + +TVS + EIT+E NP S      +  R AGVNR+S G+QS 
Sbjct: 63  PSALGGRRLTRLMDAVRRTFTVSPDAEITVECNPHSALEPALRALRGAGVNRLSFGMQSA 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++ LR LGR H A    +A+  AR   F  +SFDL+ A P QT    +  ++       
Sbjct: 123 DDRQLRALGRRHTARGFASAVKAARQCGFEHLSFDLMLATPGQTNADIDSAVKLCAQLGA 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y L IE+GT F   H + +   P E+   DLY       +  G   YEISN +  
Sbjct: 183 EHVSAYLLKIEQGTPFAARHIEAE--CPDEDGQADLYLYAVEALARQGYEQYEISNFARD 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN-GHAVVEK 318
           G  + HNL YW   +Y+G+GP AHS V     R        P      ++ +   ++   
Sbjct: 241 GHVARHNLKYWDGKEYLGVGPAAHSFVN--GRRFFF-----PRDLAAFLQADEPFSLCVD 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
           + L    Q  E++++ LRL EG+    W+ LA R
Sbjct: 294 DGLGGGAQ--EYILLRLRLTEGVV---WKTLAAR 322


>gi|160895333|ref|ZP_02076104.1| hypothetical protein CLOL250_02892 [Clostridium sp. L2-50]
 gi|156863026|gb|EDO56457.1| hypothetical protein CLOL250_02892 [Clostridium sp. L2-50]
          Length = 404

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 176/356 (49%), Gaps = 23/356 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           L +Y+H PFCVKKC YCDF      +  + R    ++ ++QS   E+   + ++    + 
Sbjct: 5   LSIYIHIPFCVKKCVYCDFLSFGADDPQINRSGAVRKAYVQSICRELLSYKSISKDYIVK 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IF GGGTPS++ P  I  IL  +   + V    EITIE NP ++       Y  AG+NR
Sbjct: 65  TIFIGGGTPSILLPGEIMNILATLRSIFKVDEEAEITIEVNPGTLTAIKAAEYLAAGINR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS     L  LGR H   + + +   AR+  F  ++ DLI A+P QT+  +   L
Sbjct: 125 MSIGLQSAHNDELAMLGRIHTYEQFLTSYQTARDAGFRNINVDLISAIPGQTLHSYLDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV--LPSENVAVDLYNLTQSITSAHGLH 249
           +R L    +H+S Y L +E GT    +  D  L+  LP E    ++Y  T  +    G  
Sbjct: 185 ERVLKCRPEHISSYSLIVEDGT---PLAGDQKLLSKLPDEETDREMYEATGKVLEMSGYK 241

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS----RVKVGSHRVAISIEKHPESWL 305
            YEISN++  G E  HN+ YW   +YIGIG GA S    R    +  +   ++   E + 
Sbjct: 242 RYEISNYAKPGYECRHNIVYWTMDEYIGIGIGAASFFNGRRYSNTSDIKQYVDTMEEVFE 301

Query: 306 KMVRKNGHAVVE-------KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           K      + + E        E +  +   +E+++ GLR+  GIS  D+    G +L
Sbjct: 302 KRSIDEAYRIPELLSIRHIDETVDIDTLMEEYVIFGLRMTRGISAADFYERFGHSL 357


>gi|328951197|ref|YP_004368532.1| oxygen-independent coproporphyrinogen III oxidase [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451521|gb|AEB12422.1| oxygen-independent coproporphyrinogen III oxidase [Marinithermus
           hydrothermalis DSM 14884]
          Length = 370

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 181/377 (48%), Gaps = 23/377 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC   CPYCDF+  VRR++   E ++     E Q +     P  + +++FGGGT
Sbjct: 7   LYVHVPFCPTICPYCDFHV-VRRHRGVVEAYLHRLAEEAQALYA-HHPDPLDTLYFGGGT 64

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  +    +   +   W ++   E+T+EANP +++    +  +  GVNRIS+GVQS 
Sbjct: 65  PSFLRDREFEALFAAL--PWRLAPRAEVTLEANPGTLDPARLEHLKALGVNRISIGVQSF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++  L+ LGR H    A  A+ LA+    R+S DLI  LP Q +     +L+ A+   V 
Sbjct: 123 QDPVLKTLGRAHGRKGAFRAVELAQEAGLRVSIDLILGLPGQDVAA---DLREAVQLEVG 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L IE GT F     +     P            ++I    GL  YE+SN +  G
Sbjct: 180 HVSAYTLQIEPGTPFAVRGLE-----PDPEREAAALEQAEAILGEAGLVRYEVSNFARPG 234

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEKE 319
            E+ HN  YWR G +  +GP A       +   ++     P   WL           ++E
Sbjct: 235 EEARHNQVYWRAGFWAALGPAAAGHYPAANEAYSVRTTNPPLPRWL------AGEPPQRE 288

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSRL 376
            +   + A E LM+GLR REG+ ++  E   G  L    E     L+  G +E V   RL
Sbjct: 289 AIPPLEHAKEALMLGLRTREGVDLEALEARTGLMLWPALEPIAARLEAAGLLE-VAERRL 347

Query: 377 RCTQRGMTMLDSVIANL 393
           R T+ G+  L  VI  L
Sbjct: 348 RPTRAGLMRLHPVILAL 364


>gi|324991246|gb|EGC23180.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK353]
          Length = 376

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 196/374 (52%), Gaps = 19/374 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYDSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHAVVEK 318
           G ES HNL YW   +Y GIG GA   V        I  + H P        + G+A V++
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVD------GIRYKNHGPIRHYLQTVEAGNARVQE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   + + 
Sbjct: 297 EALTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVPDR-NI 355

Query: 376 LRCTQRGMTMLDSV 389
           +R T++G+ + D+V
Sbjct: 356 VRMTKQGLFLGDTV 369


>gi|309792245|ref|ZP_07686717.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oscillochloris trichoides DG6]
 gi|308225786|gb|EFO79542.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oscillochloris trichoides DG6]
          Length = 394

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 187/385 (48%), Gaps = 29/385 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-------- 72
           +Y+H PFC ++C YCDFNS+        E ++ +   E+  +  +T    +S        
Sbjct: 4   LYIHIPFCHRRCSYCDFNSYAN-MDDRIEPYVAALCAELAMLASITPTPPVSAEAAALRP 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSV-EVNNFQGYRKAGV 130
           +IF GGGTP+++    I  +L  +A +  V  +  EI+ EANP ++ + +  +G R+ GV
Sbjct: 63  TIFLGGGTPTMLTLDQIERVL--VAASQIVPLAGAEISCEANPGTLLDPDYLRGLRQLGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQSL   +LR LGR H+A EA  +   AR   F  +S D I+ LP QT+  WE 
Sbjct: 121 NRLSLGVQSLHNPTLRILGRIHSAEEAHQSYLQAREAGFESISLDFIFGLPGQTLEDWET 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L    ++  DHLSLY L +E+ T  Y     G + LP ++ +  +Y +     +A+G  
Sbjct: 181 TLNEISTWQPDHLSLYSLILEEQTPLYAQVTAGRIRLPDDDRSATMYEMAIEHLAANGYV 240

Query: 250 AYEISNHS-------FLGAESLHNLNYWRYGDYIGIGPGA--HSRVKVGSHRVAISIEKH 300
            YEISN +              HNL YW   DY+  G GA  H  +    HR A  +   
Sbjct: 241 QYEISNFARSHTAGPLPSHACQHNLAYWLNSDYLAAGAGAYGHLTLPPDPHRYANRLTI- 299

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            E ++  +      + E   LS      E +MMGLRL  G+    +    G  LD     
Sbjct: 300 -EGYMAALDAGQRPLAEIIPLSPADICAETMMMGLRLNIGVGAAHFAARCGHPLDAIYSS 358

Query: 361 ---NLQRQGFIERVQFSRLRCTQRG 382
              +L  QG ++R    R+  T RG
Sbjct: 359 EIADLLAQGLLQR-DTERVWLTPRG 382


>gi|229006658|ref|ZP_04164292.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock1-4]
 gi|228754519|gb|EEM03930.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock1-4]
          Length = 378

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 166/339 (48%), Gaps = 9/339 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     ++ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFENMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +           GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L+ +GR H   +A  AI  A+ + F  ++ DLIYALP QT+   +  L  A +
Sbjct: 121 QTFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFT 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E     +Y +       HG   YEISN 
Sbjct: 181 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEARMYEMVMDEMENHGYKQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL YW    Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 241 SKEGYESGHNLTYWNNEQYYGFGAGAHSYVN-GERIQNVGPLKQ---YFSKIDETGFPYL 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   ++ +++ +E L +GLR  +G+S   ++   G  +D
Sbjct: 297 DVHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMD 335


>gi|150024318|ref|YP_001295144.1| coproporphyrinogen oxidase [Flavobacterium psychrophilum JIP02/86]
 gi|149770859|emb|CAL42324.1| Probable coproporphyrinogen oxidase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 377

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 193/378 (51%), Gaps = 13/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       ++  + +   E+   +     ++I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKKKDEMVLAIAKEIAMRKNEFKNQTIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+   ++  +++ +  N+ VS N EITIEANP  +  N      K  +NR+S+G+QS
Sbjct: 61  TPSLLNVSDLIFLINQVYSNYNVSQNTEITIEANPDDLSENRIIELSKTPINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HN++EA   + +A   F  +S DLIY  P  +  +W   ++ AL   +
Sbjct: 121 FFEEDLQLMNRAHNSAEAKKCLEIATQYFDNISVDLIYGTPGMSNERWLENIKIALDLNI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T  +K  KDG +    + +A + + +       +    YE+SN    
Sbjct: 181 PHISSYALTVEPKTALHKFIKDGMMPQLDDAMAHEQFLILVDTLETNKFIHYELSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S +N  YW    YIG+GP AHS    G +R + ++  +   +LK + +N     E E
Sbjct: 241 NYFSKNNSAYWLGKKYIGVGPSAHSY--DGKNR-SWNLSNNGR-YLKSISENT-LPSETE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF----SR 375
            LS   + +E++M GLR   G+S+   E   G        +N Q+  +++  +     + 
Sbjct: 296 TLSKTDKYNEYIMTGLRTIWGVSLNKIESEFGEKYLKYLLKNTQK--YLDDTKLILENNI 353

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T++G    D + ++L
Sbjct: 354 LRTTRKGKFFCDGIASDL 371


>gi|228910154|ref|ZP_04073973.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 200]
 gi|228849437|gb|EEM94272.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 200]
          Length = 381

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 185/383 (48%), Gaps = 13/383 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LPSE+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPSEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ- 372
               ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 298 NVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESDG 357

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +R T++G  + + V  +  +
Sbjct: 358 GGYVRLTRKGKLLGNEVFQSFLI 380


>gi|228954603|ref|ZP_04116627.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228805049|gb|EEM51644.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 379

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     SI +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKIPFDSIKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  + 
Sbjct: 298 DVHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNIEMDQVFAKQLQSNQEQGLLEE-ED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GHVRLTRKGKLLGNEVFQSFLI 378


>gi|328951862|ref|YP_004369196.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452186|gb|AEB08015.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobacca
           acetoxidans DSM 11109]
          Length = 415

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 190/405 (46%), Gaps = 55/405 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----------WMRQLTGP 68
           G+Y+H PFC  KCPYCDF      Y +  ++ + ++L  ++           W R   G 
Sbjct: 25  GLYLHVPFCQTKCPYCDF------YSITDDSLVFAWLQALEKEIDLLNRKPVWRRSRAGT 78

Query: 69  RSISSI-----------------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
             + ++                 + GGGTPS +    I+ + D I + +  + + EIT+E
Sbjct: 79  NILPAVGPGHDARAFGCSQFDTFYLGGGTPSCLGQDEISTVFDLIRQGFVFTKDAEITLE 138

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
           ANP  V  +    + + GVNR+SLGVQSL +  LRFL R H+A +A  A+ LAR   F  
Sbjct: 139 ANPDDVTADRLHLWGRLGVNRLSLGVQSLLDAELRFLSRRHDALQARQALSLAREAGFEN 198

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           +  DL+Y LP QT   W   L   L +  +HLS YQLTIE+ T        G +    E 
Sbjct: 199 LGVDLMYGLPGQTKDNWLATLDSILVFQPEHLSCYQLTIEENTPLAAKRAQGLIKPLPEE 258

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRYGDYIGIGPGAHS--- 284
              D + LT       G   YEISN  F   E   S HN  YWR+  Y+G+GP AHS   
Sbjct: 259 QQRDFFLLTSQYLEEQGYLHYEISN--FARNEPCISRHNSKYWRHTPYLGLGPAAHSFDG 316

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           R++  ++R           + + +      +  +E L+ EQ+  E + +GLR + G  + 
Sbjct: 317 RLRFWNYRSV-------AEYCQALAAGKPPLDGREELTVEQRRLEAIYLGLRTKNGALLT 369

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +  L       E    L R G + RV   R+  T++G  + DS+
Sbjct: 370 FFTSLEAE----EALSGLCRAGLV-RVYQGRVLPTRQGFLVADSL 409


>gi|206969798|ref|ZP_03230752.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH1134]
 gi|206735486|gb|EDZ52654.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH1134]
          Length = 379

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 186/389 (47%), Gaps = 27/389 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     SI +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSIKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KVGSHRVAIS-IEKHPESWLKMVR 309
           S    +S HNL YW   +Y G G GAHS V       VG  +   + I++    +L +  
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGPLKQYFNKIDETEFPYLDV-- 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
              H V EKE +  E      L +GLR  +G+S   +       +D    + L   Q QG
Sbjct: 300 ---HKVTEKERMEEE------LFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +E  +   +R T++G  + + V  +  +
Sbjct: 351 LLEE-EDGHVRLTRKGKLLGNEVFQSFLI 378


>gi|189218327|ref|YP_001938969.1| Coproporphyrinogen III oxidase or related Fe-S oxidoreductase
           [Methylacidiphilum infernorum V4]
 gi|189185185|gb|ACD82370.1| Coproporphyrinogen III oxidase or related Fe-S oxidoreductase
           [Methylacidiphilum infernorum V4]
          Length = 363

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 200/375 (53%), Gaps = 28/375 (7%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +Y H+PFC   CPYC F   +  R+  Y V     I++ + E++ +   T   +  ++F 
Sbjct: 6   LYFHFPFCSTVCPYCGFYVTTAARKEIYLV-----IEALIREVELL-STTFRLNPQTLFI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPSL +P  I  +L  I K      NV EITIEANP +V +     ++++G+NR+SL
Sbjct: 60  GGGTPSLAKPAEIDRLLAAIPKE-----NVKEITIEANPRTVTLQKAVQWKESGINRVSL 114

Query: 136 GVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQSL+E+ L  LGR H   + + +A  L +     ++ D I+ +P Q +  ++  L R 
Sbjct: 115 GVQSLDEKELLILGRRHKPKDVVDSANALRKGGIENINLDFIFGIPTQGVESFKRSLYRG 174

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L  +  H+SLY L+ E+GT F++  K G  V P E   +++  +   + + HG   YE+S
Sbjct: 175 LELSPKHISLYCLSYEEGTPFFEEMKKGRFV-PDEKKEIEMMEMACELLADHGFVRYEVS 233

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +SLHN  YW+  DY+GIGP A S   VG+ R + ++  + + +++ +++    
Sbjct: 234 NFALPGYQSLHNKAYWQGKDYLGIGPSACS--TVGNKRWS-NLNDYIQ-YVQELQEGRLP 289

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           +   E L  E +  E L + LR  EGI++        R ++   E  L   G+I+    +
Sbjct: 290 IKTMESLDEELKKKERLFLALRTDEGITLGQEGEKEKRTVEWLVEEGL---GYIKE---N 343

Query: 375 RLRCTQRGMTMLDSV 389
           R   T RG  + D +
Sbjct: 344 RFILTNRGFLLADEI 358


>gi|46581460|ref|YP_012268.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46450882|gb|AAS97528.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311235113|gb|ADP87967.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris RCH1]
          Length = 497

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/345 (33%), Positives = 183/345 (53%), Gaps = 11/345 (3%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           ++++  +E+       G  ++ +IFFGGGTPSL+ P  +A ILD + + ++V+   EI++
Sbjct: 126 YVETLFSELALWGDRLGNATVETIFFGGGTPSLLPPHVVAAILDRVHRTFSVAPGAEISL 185

Query: 111 EANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-F 168
           EANP S+      +G   AGVNR+SLGVQ+L++  L  +GR H A +AI A + AR+  F
Sbjct: 186 EANPESLSNRQQARGLYDAGVNRLSLGVQALDDALLHLMGRPHRARDAIRAFNAARDAGF 245

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             +S D I+ LP Q + QW  +L+  +    +HLS Y LT+E+GT      + G + LP 
Sbjct: 246 TNISLDFIWGLPGQRLRQWLDQLREVVRLRPEHLSCYGLTLEEGTPLTADVESGSIALPV 305

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           E     ++          G   YEISN + +G +  HNL YW   DY+G+GP A S +  
Sbjct: 306 EREQAAMFMQGAERLEEAGYLQYEISNFARMGFQCHHNLGYWEGRDYLGLGPSATSTID- 364

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
               +  +      +W + VR  G    + E L    +  E +M+ LR   G+ VK +  
Sbjct: 365 ---GLRWTNPYDHGAWHESVR-TGRIGADAERLDLTVRVLELVMLRLRTTRGLRVKAYRE 420

Query: 349 LAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           L GR+   + +     L R G + R++   LR T+ GM + +S++
Sbjct: 421 LTGRDFLRDHKPLVHLLHRNGLV-RIRDGYLRLTRNGMLVSNSIL 464


>gi|16329864|ref|NP_440592.1| coproporphyrinogen III oxidase [Synechocystis sp. PCC 6803]
 gi|2493814|sp|P73245|Y1917_SYNY3 RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein sll1917
 gi|1652349|dbj|BAA17272.1| oxygen independent coprophorphyrinogen III oxidase [Synechocystis
           sp. PCC 6803]
          Length = 412

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 175/355 (49%), Gaps = 27/355 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-------VGQENFIQSFLTEMQWMRQ 64
           TG        Y+H PFC ++C YCDF   V  ++       VG+  ++++   E+   + 
Sbjct: 3   TGTYLMPTAAYIHIPFCRQRCFYCDFPIAVTGFQSLTLDGWVGE--YVEAVCREIAGQQH 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  + ++FFGGGTPSL+    +  IL  + +   ++ + EI+IE +P + +    QG
Sbjct: 61  QGQP--LQTVFFGGGTPSLLPITGLEKILLAVDQYLGIAPDAEISIEIDPGTFDQVQLQG 118

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPK 181
           Y+  G+NR SLGVQ+ ++  L   GR+H   +  +A+ AI  A+      S DLI  LP+
Sbjct: 119 YKNLGINRFSLGVQAFQDNLLALCGRHHRRRDIDQALTAI--AKENIENWSLDLITGLPE 176

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   W   L  AL+    H+S Y L +E  T+F K  + G L +P    + D Y   Q 
Sbjct: 177 QTAADWHSSLTLALAAGPKHISCYDLVLEPQTVFDKWEQRGKLAVPPPERSADFYRHGQE 236

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIE 298
           + +  G H YEISN+   G +  HN  YWR   Y G+G GA S +   + G  R      
Sbjct: 237 VLTQAGFHHYEISNYGRPGHQCRHNQIYWRNLPYYGLGMGATSYIDGKRFGRPRTRNGYY 296

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           +  ESWL     N    +  E +S  +   E LM+GLRL  G++   W  L   N
Sbjct: 297 QWLESWL-----NQGCPIPGERVSPLENLLESLMLGLRLTAGVT---WAQLPSVN 343


>gi|256419534|ref|YP_003120187.1| oxygen-independent coproporphyrinogen III oxidase [Chitinophaga
           pinensis DSM 2588]
 gi|256034442|gb|ACU57986.1| oxygen-independent coproporphyrinogen III oxidase [Chitinophaga
           pinensis DSM 2588]
          Length = 374

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 168/322 (52%), Gaps = 8/322 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YC+F  H       Q   ++  + E+   R       +SSI+FGGG
Sbjct: 3   GIYLHIPFCKQACYYCNF--HFSTSLSQQPALVKQLVREIDLQRNYLSGAPVSSIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++   +I L+L  +   + V+ + EIT+EANP  +        R AG+NR+S+G+QS
Sbjct: 61  TPSMLPQADIQLLLSKLRDTFPVNPDAEITLEANPDDLSPGKLDALRAAGINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  LR++ R H++ +A+ +I  A+   F  ++ DLIY  P  T   W   +Q+A+   
Sbjct: 121 FHEPDLRWMNRAHDSQQALQSIINAKAAGFDNLTIDLIYGGPTLTDEGWAANVQQAIDLG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y LT+E GT   +  +   +     + A   +      T+  G   YEISN + 
Sbjct: 181 VQHLSCYALTVEPGTALDQFIRKKKVAAVDSDKAARHFEQLMQWTAKAGYEHYEISNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G+GP AHS    GS +  I+   +   ++K + ++     E 
Sbjct: 241 PGWHSRHNSSYWQGQPYLGLGPSAHS-FNGGSRQWNIA---NNAQYIKSMEQD-KVPFEL 295

Query: 319 EFLSSEQQADEFLMMGLRLREG 340
           E L++    +E++M  LR  +G
Sbjct: 296 EELTAVMMLNEYIMTTLRTSQG 317


>gi|258651797|ref|YP_003200953.1| oxygen-independent coproporphyrinogen III oxidase [Nakamurella
           multipartita DSM 44233]
 gi|258555022|gb|ACV77964.1| oxygen-independent coproporphyrinogen III oxidase [Nakamurella
           multipartita DSM 44233]
          Length = 411

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/281 (36%), Positives = 147/281 (52%), Gaps = 8/281 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-----TEMQWMRQLTG 67
           G    +L  YVH PFC  +C YCDFN++    ++G     QS+L           R L  
Sbjct: 30  GAADRTLSFYVHVPFCATRCGYCDFNTYTA-GELGSAASPQSWLDAALAEVELAARVLGR 88

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R++S++F GGGTPSL+  + +  IL  I + + ++ + E++ EANP S +       R 
Sbjct: 89  GRTVSTVFVGGGTPSLVGAEPLTRILTAIDERFGLADDAEVSTEANPESTDPALLGALRA 148

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS   + L  L R H    A+  +  A +  F  ++ DLIY  P +T  +
Sbjct: 149 AGFTRLSLGLQSTSRRVLTVLDRTHTPGRALDVVRWAGQEGFEHVNLDLIYGTPGETDAE 208

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L   ++  VDH+S Y L +E GT   +    G L +P E+V  D Y L   + +  
Sbjct: 209 FTDSLAAVIASGVDHVSAYSLIVEPGTRLARQFDRGVLPMPDEDVLADRYLLADELLTGA 268

Query: 247 GLHAYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRV 286
           GLH YE+SN +   A    HNL YW   D+ GIGPGAHS V
Sbjct: 269 GLHWYEVSNWARTPAGGCRHNLAYWTGQDWWGIGPGAHSHV 309


>gi|229075991|ref|ZP_04208964.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-18]
 gi|228707103|gb|EEL59303.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-18]
          Length = 379

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYSQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E    
Sbjct: 298 DVHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQGNQEQGLLEERD- 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GYVRLTRKGKLLGNEVFQSFLI 378


>gi|228941484|ref|ZP_04104034.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228974414|ref|ZP_04134982.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228981009|ref|ZP_04141311.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis Bt407]
 gi|228778669|gb|EEM26934.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis Bt407]
 gi|228785250|gb|EEM33261.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228818134|gb|EEM64209.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326942100|gb|AEA17996.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 379

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  + 
Sbjct: 298 DVHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-EN 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GHVRLTRKGKLLGNEVFQSFLI 378


>gi|30022396|ref|NP_834027.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 14579]
 gi|218235720|ref|YP_002369126.1| coproporphyrinogen III oxidase [Bacillus cereus B4264]
 gi|228960585|ref|ZP_04122233.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229129597|ref|ZP_04258566.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-Cer4]
 gi|229152519|ref|ZP_04280710.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1550]
 gi|296504811|ref|YP_003666511.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
 gi|29897954|gb|AAP11228.1| Coproporphyrinogen oxidase, anaerobic [Bacillus cereus ATCC 14579]
 gi|218163677|gb|ACK63669.1| coproporphyrinogen dehydrogenase [Bacillus cereus B4264]
 gi|228630950|gb|EEK87588.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1550]
 gi|228653865|gb|EEL09734.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-Cer4]
 gi|228799098|gb|EEM46067.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|296325863|gb|ADH08791.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
          Length = 379

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  + 
Sbjct: 298 DVHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-ED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GHVRLTRKGKLLGNEVFQSFLI 378


>gi|194335488|ref|YP_002017282.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194307965|gb|ACF42665.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 374

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 188/379 (49%), Gaps = 21/379 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-----MRQLTGPRSISS 73
           L +Y+H PFC  +C YCDF      Y V     I  F   +       +  L G  ++ +
Sbjct: 2   LTLYLHIPFCKARCSYCDF------YLVTGRGHISDFFRALSLETASRLTDLKG-ETVGA 54

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I FGGGTPS++    +A  L+ +A   + S  +EIT+EANP  ++    +  R AG+ R+
Sbjct: 55  IHFGGGTPSMVPVSYLAAWLEEVAALCSFSPEIEITLEANPEDLDKKKMEELRAAGITRL 114

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+GVQS   + L+ LGR H A ++      A  +F  +S DLI  +P +    W+ +L  
Sbjct: 115 SIGVQSFTAEKLQALGRAHTALQSRQVTAAALRLFESVSVDLICGVPGENTVMWKSDLHE 174

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+    H+S+Y L++E  T+ +     G + +P + V    Y   QS     G   YE+
Sbjct: 175 ALALRPHHVSVYMLSVEPKTILHHRVAKGSVTVPDDAVQAACYEHAQSELQLQGYSHYEV 234

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G  S +NL  W+   Y+G GP AHS   V   R   +   +  S  + +     
Sbjct: 235 SNFCLPGHHSRYNLASWKREPYLGFGPSAHS-FSVSQEREIRT--ANVSSLTRYLAAPAD 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
           AVV +E LS+E++  E + + LR+  G+ V D+ +  G  L+    + + R   +G+IE+
Sbjct: 292 AVVFREELSAEERFTEQVFLSLRINSGLDV-DF-LRKGNKLEHTLSQTIARFSEKGWIEQ 349

Query: 371 VQFSRLRCTQRGMTMLDSV 389
            Q   L  TQ+G   +D +
Sbjct: 350 -QEGSLYLTQKGFLFVDLI 367


>gi|318040429|ref|ZP_07972385.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CB0101]
          Length = 435

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 182/377 (48%), Gaps = 21/377 (5%)

Query: 6   AYENNMTGQ-GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           A E N  GQ G      Y+H PFC ++C YCDF       +   E       +   ++ Q
Sbjct: 22  AREGNRHGQLGWPPRSAYLHIPFCHRRCFYCDFPVVPLGDRASAEAGAPGSASIAHYLEQ 81

Query: 65  L--------TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
           L        TGP  +S+++ GGGTPSL+  + +  +L  + + + ++   E+++E +P+S
Sbjct: 82  LQREIALAPTGP-PLSTVYVGGGTPSLLSAEQLRGLLAALRRRFGLAPGAEVSLELDPAS 140

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-----FPRM 171
            +     GY  AGV R+SLG QS  +  L  LGR H +++ + A    R           
Sbjct: 141 FDQQRLSGYLAAGVTRVSLGGQSFSDAVLEQLGRRHRSADLLEAAGWLRQAQANGRLQSW 200

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DLI  LP Q +  W+ +L +A++    HLS+Y L +E GT+F +M + G L LP  ++
Sbjct: 201 SLDLIQGLPGQNLAGWQEQLHQAIALRPPHLSVYDLIVEPGTVFERMERRGTLALPESDL 260

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
           A DL  LT    +A G   YEISN++  G  S HN  YW    + G G GA +    G  
Sbjct: 261 AADLMELTARTLAAAGYGHYEISNYALPGHASRHNRVYWSGAGWWGFGMGATA-APWGVR 319

Query: 292 RVAISIEKHPESWLKM---VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                  +   +WL+     R+     +  +  ++    DE  M+GLR REG+ ++  E 
Sbjct: 320 EARPRTREGYAAWLEQQAAARRQSDGSLTPDG-AAGMPLDELWMVGLRRREGVLLQAPES 378

Query: 349 LAGRNLDIECERNLQRQ 365
           L  R      E+ L RQ
Sbjct: 379 LR-RRWQPFVEQGLLRQ 394


>gi|307721620|ref|YP_003892760.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979713|gb|ADN09748.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 351

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/325 (36%), Positives = 176/325 (54%), Gaps = 24/325 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGG 78
           VY+H PFC  KC YC FNS+V ++ + +E ++Q+   ++Q   +R      +I ++F GG
Sbjct: 3   VYIHIPFCDSKCSYCAFNSYVDKFHL-KEKYMQALKKQLQHELLRFQAKKETIETVFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + P+    I   +  N  +  N EIT EANP+S      +G +K GVNRIS G Q
Sbjct: 62  GTPSTVNPKLYEDIFALL--NPYLVHNAEITSEANPNSATKEWLEGMKKLGVNRISFGTQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ L R H    +I A+H A  I F  +S DLIYA    T      +L  A+S 
Sbjct: 120 TFDKEKLKLLNRAHTPQISIDAVHNASQIGFKNISLDLIYATLGDTKELLASDLHVAMSL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S Y L IE+GT F     +    + SE +++  + L Q I   +G   YEISN  
Sbjct: 180 PINHISAYALMIEEGTAF-----ENRPQMSSEQLSLTKW-LFQKI-QKYGFKQYEISN-- 230

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F   +SLHNL YW+Y DYIG G GA  ++ +        IE + ++ LK         ++
Sbjct: 231 FGTYQSLHNLGYWKYKDYIGAGAGAVGKLGLMRFYPQTDIETYIDNPLK---------IQ 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGIS 342
           +E LS E +  E + +GLR   GI+
Sbjct: 282 EEMLSQEDKRLEQIFLGLRSVVGIN 306


>gi|226328809|ref|ZP_03804327.1| hypothetical protein PROPEN_02709 [Proteus penneri ATCC 35198]
 gi|225201995|gb|EEG84349.1| hypothetical protein PROPEN_02709 [Proteus penneri ATCC 35198]
          Length = 225

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 137/219 (62%), Gaps = 5/219 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++       G R + +IF GG
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHTLKGEVPHQEYVQHLLNDLDADLIHVGSREVQTIFIGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++A +L G+ +   VS N EIT+EANP +VE   F G+++AGVNRIS+GVQ
Sbjct: 67  GTPSLLSAESMADLLYGVKERLAVSPNAEITMEANPGTVEAERFAGFQRAGVNRISIGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H+A EA  A  LA+ +  R  + DL++ LP Q+++Q   +LQ+A+  
Sbjct: 127 SFGNDKLIRLGRIHDADEAKNAARLAKKLGLRSFNLDLMHGLPDQSLSQALSDLQQAIEL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           +  HLS YQLTIE  T F          LP +++  D++
Sbjct: 187 SPPHLSWYQLTIEPNTQFGSRPPK----LPDDDMLWDIF 221


>gi|291165719|gb|EFE27767.1| oxygen-independent coproporphyrinogen III oxidase [Filifactor
           alocis ATCC 35896]
          Length = 379

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 195/380 (51%), Gaps = 12/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC +KC YCDF S  +   V Q ++I     E+   ++    R++ +IF GG
Sbjct: 5   ISLYIHIPFCKQKCSYCDFVSSAQSEDV-QTHYISLLCKEILGWKEYLSDRTVKTIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++   N+  + + +  +  + S  E ++E NP SV  +     ++  VNR+S+G+Q
Sbjct: 64  GTPSILSVSNMQTLFNTL-HSLPIPSETEFSMECNPESVTADKIHCMKQNAVNRLSIGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+ LGR H+  + + A   + ++ F  ++ DL++ALP QT+      LQ+ +S 
Sbjct: 123 STNQKELQLLGRCHSYEQFLHAYEQIQQSGFDNINIDLMFALPNQTIQDHIRTLQKVVSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +E+GT   K        +PSE   +++Y  T      +G   YEISN S
Sbjct: 183 KPNHISAYSLILEEGTQLKKQVDHHYCEIPSEEEYIEMYRNTIHFLEINGYEQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E  HN+ YW  G+YIG G  A S V        +S++++ E      +    AV  
Sbjct: 243 KQNHECKHNIVYWERGEYIGFGVSASSFVDKKRFTNPMSLQEYSEHTFYTPK----AVSS 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            E +  E+  +E + +GLR+ +G+S+    + +    G     +   +LQ +G I   + 
Sbjct: 299 IEQIDLEEAFEETIFLGLRMNKGLSIPWLKQQFPSFTGEQFK-KTLSSLQNRGLIYPTEN 357

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           + L+ TQ G+ + + V   +
Sbjct: 358 NILQLTQEGIEISNQVFLEI 377


>gi|254495253|ref|ZP_05108177.1| coproporphyrinogen III oxidase [Polaribacter sp. MED152]
 gi|85819606|gb|EAQ40763.1| coproporphyrinogen III oxidase [Polaribacter sp. MED152]
          Length = 377

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 198/378 (52%), Gaps = 13/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YC+F       K  +   +     E+   ++      + +I+FGGG
Sbjct: 3   GIYIHIPFCKQACYYCNFYFSTSLKK--KTELLDCLAKEIVLRKEELNNDVVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q I  +++ + +N+ V  N EIT+EANP  +     +    + +NR+S+GVQS
Sbjct: 61  TPSILSTQEINNLIEAVYENFKVIDNPEITLEANPDDLSEEKIKELAASKINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA E+   + +A   F  +S DLIY +P  +  QW   +  ALSY V
Sbjct: 121 FFERDLKLMNRAHNAEESKKCLEIATQYFSNISVDLIYGIPDCSNEQWTENIHTALSYGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   +    G +    ++ A + + +     +A G   YE+SN    
Sbjct: 181 PHISSYALTVEPDTALERFIDKGVIKNVDDDKAEEQFLILTDELNAAGFIHYELSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S +N  YW    Y+GIGP AHS   V   + + +++ + + ++K + +N    +++E
Sbjct: 241 DFFSKNNSAYWLGKSYLGIGPAAHSFDGV---QRSWNVQNNTK-YIKNILEN-ELPIQRE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSR 375
            LS   + +E++M GLR   G+S++  E   G+N     +  +Q Q +I++    ++   
Sbjct: 296 VLSVTDRYNEYVMTGLRTIWGVSLQRVESEFGKNYAKYLQ--MQAQKYIDQELLFIEDEV 353

Query: 376 LRCTQRGMTMLDSVIANL 393
           L+ T++G  + D + ++L
Sbjct: 354 LKTTRKGKFLSDGLASDL 371


>gi|332709825|ref|ZP_08429782.1| coproporphyrinogen III oxidase, anaerobic [Lyngbya majuscula 3L]
 gi|332351423|gb|EGJ31006.1| coproporphyrinogen III oxidase, anaerobic [Lyngbya majuscula 3L]
          Length = 381

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 159/284 (55%), Gaps = 6/284 (2%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+ ++FFGGGTPSL+  + +A ILD + + + ++++ EI++E +P +   +   GYR  G
Sbjct: 34  SLDTVFFGGGTPSLLTVEQLAKILDTLDRRFGIAADAEISMEMDPGTFNKDQLTGYRDLG 93

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+SLGVQ+ +++ L   GR H++ + + AI L   +  P  S DLI  LP QT+ QW+
Sbjct: 94  VNRVSLGVQAFQDKLLSNCGRTHDSKDIVTAIELIHQVEVPEFSLDLISGLPAQTLEQWQ 153

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L+  +  A  H+S Y L +E  T F + +  G   LP++   V +Y L Q + ++ G 
Sbjct: 154 ESLEITVKIAPTHISSYDLVLEPVTAFGRQYTSGTKPLPTDETTVMMYRLAQQVFTSVGY 213

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN++  G +  HN  YW    Y G G GA S  + G         +  ++W++ +
Sbjct: 214 EHYEISNYALPGHQCRHNRVYWENRPYYGFGMGAASYTQ-GYRFTRPRTRREYDAWVEQL 272

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
            + G  V +    +SE    E LM+GLRL EG+S+    MLA R
Sbjct: 273 LEAG-GVWDGSPTTSEDVLLETLMLGLRLAEGLSLS---MLAQR 312


>gi|163753112|ref|ZP_02160236.1| coproporphyrinogen III oxidase [Kordia algicida OT-1]
 gi|161326844|gb|EDP98169.1| coproporphyrinogen III oxidase [Kordia algicida OT-1]
          Length = 343

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 185/341 (54%), Gaps = 13/341 (3%)

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E+Q  +       + +I+FGGGTPS++  + I  IL  + +N++VSS+ EIT+EANP  V
Sbjct: 8   ELQLRKAELAETPVETIYFGGGTPSMLSLEEIQAILQTVYENYSVSSDPEITLEANPDDV 67

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
                +   K+ +NR+S+G+QS  E  L+ + R HN+ EA   + +A   F  ++ DLIY
Sbjct: 68  TEAKIKELAKSPINRLSIGIQSFYEAHLQLMNRAHNSEEAKKCLEIATKYFENITIDLIY 127

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +P  TM QW+  L+   ++ ++H+S Y LT+E  T   K  + G +   SE  ++  +N
Sbjct: 128 GVPNMTMEQWKTNLETVFNFGINHISSYALTVEPKTALEKFIRQGKVKDVSEEASLAHFN 187

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAIS 296
              S T   G   YEISN       S HN +YW+   YIGIGP AHS   K  S  V+ +
Sbjct: 188 ELVSATKKQGFVHYEISNFGKPNYFSKHNTSYWKGATYIGIGPSAHSFDTKTRSWNVSNN 247

Query: 297 IEKHPESWLKMVRKNGHAV-VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            +     ++K + +N   + +EK  LS + Q +E++M GLR   GIS+   +   G +  
Sbjct: 248 TK-----YIKSIEENILPLTIEK--LSKDDQYNEYVMTGLRTIWGISLGYIKENFGESY- 299

Query: 356 IECERNLQRQGFIER-VQFS--RLRCTQRGMTMLDSVIANL 393
           ++  +++ +Q   E  +Q S   ++ TQ+G  + D + A+ 
Sbjct: 300 LQHTKHIAQQHLEENTIQCSAEAIKTTQKGKFLCDGIAADF 340


>gi|153953533|ref|YP_001394298.1| coproporphyrinogen III oxidase [Clostridium kluyveri DSM 555]
 gi|219854155|ref|YP_002471277.1| hypothetical protein CKR_0812 [Clostridium kluyveri NBRC 12016]
 gi|146346414|gb|EDK32950.1| Oxygen independent coproporphyrinogen III oxidase-related protein
           [Clostridium kluyveri DSM 555]
 gi|219567879|dbj|BAH05863.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 383

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 11/337 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC KKC YCDF S+      G+EN +  +   +    +  G R I +IF GG
Sbjct: 13  LSLYIHIPFCKKKCFYCDFPSYS-----GKENVMMDYSKVLAKDIETMGNREIDTIFIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +       I   I K    + ++E T+E NP +         R  GVNR+S+G+Q
Sbjct: 68  GTPTYLSLDAWYNIDKSIQK-LNTTEDLEFTVEGNPGTFTKEKLIFLRNMGVNRLSIGLQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +   L+ LGR H   + +    +AR++ F  ++ DLI+ LP QT+  W   L+  +  
Sbjct: 127 AWQNDMLKNLGRVHTLEDFLEGYKMARSLGFSNINVDLIFGLPGQTLEIWRDCLENVVEI 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +H+S Y L +E+GT FY ++ +  L LP E     +Y+ T           YEISN  
Sbjct: 187 SPEHISCYSLIVEEGTPFYNLYGENKLNLPPEKEERAMYDFTLEFLLKKCYKQYEISNFC 246

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNL YW    Y+G G GAHS      +R   +IE++    L+  R N    ++
Sbjct: 247 KKGNMCRHNLVYWDLKQYVGCGAGAHSYAGGYRYRNTENIEQY---ILEGTRGN-FLKLD 302

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +   S     +EF+ MGLR   GIS+ D+     +N+
Sbjct: 303 RHKNSIYNDMEEFMFMGLRKVNGISISDFNNRFSKNI 339


>gi|326566636|gb|EGE16778.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis BC1]
          Length = 322

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 164/303 (54%), Gaps = 18/303 (5%)

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  ++   + DG+   +  +   EIT+EANP ++E + F  Y   G+NR+S+G
Sbjct: 2   GGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSIG 61

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +  +L  LGR HN  +A  AI  AR   F R++ DL+Y LP Q  ++   ++Q A+
Sbjct: 62  VQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTAI 121

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLS YQLTIE  T FY+        LP E +  ++  L QS+ + HG + YE+S 
Sbjct: 122 DAGATHLSWYQLTIEPNTTFYRTPPQ----LPDEEIMAEIETLGQSVLTKHGFYNYEVSA 177

Query: 256 -HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR------VAISIEKHPESWLKMV 308
            H    A   HNLNYW++GDY+ IG GAH ++ + +H             + P+ +L   
Sbjct: 178 WHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAF- 236

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQ 365
            ++   +V  E +S +    EF+M  LRL++G+S   +E   G     +D E    LQ Q
Sbjct: 237 -EDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEM-LPLQHQ 294

Query: 366 GFI 368
           G +
Sbjct: 295 GLM 297


>gi|229111790|ref|ZP_04241337.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-15]
 gi|229148164|ref|ZP_04276470.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST24]
 gi|228635304|gb|EEK91828.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST24]
 gi|228671664|gb|EEL26961.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-15]
          Length = 379

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKNLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLK---QYFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  + 
Sbjct: 298 DVHKVTEKERMEEELFLGLRKTKGVSKTAFHNKFNIEMDQVFAKQLQSNQEQGLLEE-ED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GHVRLTRKGKLLGNEVFQSFLI 378


>gi|157150147|ref|YP_001450610.1| coproporphyrinogen III oxidase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074941|gb|ABV09624.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 376

 Score =  183 bits (464), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 201/373 (53%), Gaps = 17/373 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYHSYDIQKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   +  + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKAIALDI 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEISN S  
Sbjct: 183 PHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YW   +Y GIG GA   V    ++    I +H   +L+ V + G+  V++E
Sbjct: 243 GFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI-RH---YLQAV-EAGNTRVQEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRL 376
            L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   + + +
Sbjct: 298 VLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTDQGLLVPDR-NIV 356

Query: 377 RCTQRGMTMLDSV 389
           R T++G+ + D+V
Sbjct: 357 RMTKQGLFLGDTV 369


>gi|325569967|ref|ZP_08145926.1| coproporphyrinogen dehydrogenase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156934|gb|EGC69103.1| coproporphyrinogen dehydrogenase [Enterococcus casseliflavus ATCC
           12755]
          Length = 415

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 178/338 (52%), Gaps = 12/338 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLT 66
           N+ + + + ++  Y+H PFC   C YCDFN   + +  GQ  + +I++ L E++      
Sbjct: 27  NDPSTKSAQNISAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIEALLKEIELTLLRQ 83

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                 +I+ GGGTP+ +    +  +L G+ +     +  E T+EANP  +        +
Sbjct: 84  PLNEAKTIYIGGGTPTSLSANQLDRLLSGVHELLPTHTTEEFTVEANPGDLSEEKMLVLK 143

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMT 185
              VNR+S+GVQ+ + + L+ +GR H A +  + I L  ++ F  ++ DLIYALP Q++ 
Sbjct: 144 NHQVNRLSMGVQTFDNRLLKKIGRKHTAEDVYSTIQLLEKHDFQNVTIDLIYALPGQSIE 203

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L RA+   + H ++Y L +E  T+F    + G + LPS+     +++   +  + 
Sbjct: 204 SFRDTLTRAIDLGLPHYAMYSLILENKTMFMNWVRQGRMALPSQEAETQMFDEAIAAMTK 263

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESW 304
            GL+ YEISN +  G ESLHNL YW    Y G G GA   +    ++      K P + +
Sbjct: 264 AGLNQYEISNFARTGYESLHNLVYWNNEHYFGFGAGASGYLGQTRYK-----NKGPIQHY 318

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           LK +++N   + E E L++  Q +E L +GLR + GIS
Sbjct: 319 LKPLQENQLPIHEIEELTTSNQMEEELFLGLRKKVGIS 356


>gi|145219103|ref|YP_001129812.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prosthecochloris vibrioformis DSM 265]
 gi|145205267|gb|ABP36310.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium phaeovibrioides DSM 265]
          Length = 373

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 189/380 (49%), Gaps = 15/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K+C YCDF  ++    +  E+F  +   E      L   ++I +I FGG
Sbjct: 2   LSLYVHIPFCRKRCSYCDF--YLVAGTLRMEDFFVALRRETASRASLLKGQTIGAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+  P  +   L+ +A   + + ++EI +EANP  ++ +    + +AGVNR+SLGVQ
Sbjct: 60  GTPSMASPSLLGSWLEQVASLASFAPDMEIALEANPEDLKGSAANEFHQAGVNRLSLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR H+  EA+AA   A  +F  +S DLI  +P +    W+ +L+RA    
Sbjct: 120 SFSPEKLSSLGRAHSPREAMAAARDAVRMFDSVSLDLICGVPGEDRGVWQDDLERAKESE 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L++E  TL  +    G + +P E      Y        A G   YE+SN + 
Sbjct: 180 AQHVSVYMLSLEPRTLLSRDVSAGRVRVPDEGEQAGFYMQALKELKAAGYGHYEVSNFAM 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
            G  S +NL  W+   YIG GP AHS  R + G  R A     +  S  + +     A  
Sbjct: 240 PGCHSRYNLASWKREPYIGYGPSAHSFLRTEEGELRTA-----NEASLSRYLSSPQAAEG 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
            +E L   ++ +E + + LR+  G+S++   +  G  L  E  + L   + +G+I R + 
Sbjct: 295 FREVLGERERFEEQVFLSLRINSGLSIEF--LRKGNTLPNEMMKALETMEERGWI-RYEN 351

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             L  T  G    D + A L
Sbjct: 352 GTLYLTDPGFLFADLIAAEL 371


>gi|72382716|ref|YP_292071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. NATL2A]
 gi|72002566|gb|AAZ58368.1| coproporphyrinogen III oxidase, anaerobic [Prochlorococcus marinus
           str. NATL2A]
          Length = 410

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 199/402 (49%), Gaps = 39/402 (9%)

Query: 21  VYVHWPFCVKKCPYCDFN-----SHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSI 71
            Y+H PFC K+C YCDF+        +         I S+L  +   R+++    GP ++
Sbjct: 8   AYLHIPFCHKRCFYCDFSIIPLGDSAQSPDSPGITSINSYLDLLH--REISISPKGP-AL 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+I+ GGGTPSL++   +  +L  + + +      EIT+E +P++   N+  GY   G+N
Sbjct: 65  STIYLGGGTPSLLKKNEVGDLLKNLQRKFGFQDGAEITMEVDPATFFENDLDGYIGIGIN 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQ 186
           R SLG Q+ ++ +L  +GR HN S+ I A     N+F +      S DLI  LP   +++
Sbjct: 125 RFSLGAQAFDDSTLASIGRKHNRSQLIEACDWVNNLFKKGMLRSWSLDLIQNLPGLNLSK 184

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAVDLYNLTQSITS 244
           W  EL++A+S    HLS+Y LTIE  T+F ++HK G L +P  SE+  +D    T  +  
Sbjct: 185 WIKELEQAVSTEAPHLSIYDLTIEPDTVFGRLHKKGKLNIPIDSESQKIDFE--TTRLLK 242

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           + G   YEIS++S  G  S HN  YW    + G G GA S    G      S  +    +
Sbjct: 243 SRGFARYEISSYSLPGHASRHNRMYWSGSGWWGFGMGATS-APWGER---FSRPRTIAGY 298

Query: 305 LKMVRKNGHAVVEKEF---LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            K + +     +EK      S     DE LM+GLR REGI +++    AG     +C++N
Sbjct: 299 KKWLEQQESQTLEKTLSIEKSKSMPLDELLMIGLRRREGIHLEELAKNAGWT-QKKCDKN 357

Query: 362 LQ----------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           L+           +GF+ R          +GM + + ++  +
Sbjct: 358 LKSLEKFWLNSINEGFLLRHNGRYFLSDPKGMQISNQILIQM 399


>gi|262203055|ref|YP_003274263.1| oxygen-independent coproporphyrinogen III oxidase [Gordonia
           bronchialis DSM 43247]
 gi|262086402|gb|ACY22370.1| oxygen-independent coproporphyrinogen III oxidase [Gordonia
           bronchialis DSM 43247]
          Length = 401

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 163/339 (48%), Gaps = 24/339 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----------LTG 67
            G+Y+H PFC  +C YCDFN+    Y  G+   + S  +   W R            L+ 
Sbjct: 28  FGLYLHVPFCATRCGYCDFNT----YTAGE---LGSSSSPESWRRAVAAELELAAGMLSP 80

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R +SSIF GGGTPSL+    +  +LD +  N+ ++ + EIT E+NP S     F G   
Sbjct: 81  ARPVSSIFVGGGTPSLLGASGLTELLDRVRDNFELADDAEITTESNPESTSPAFFDGLAA 140

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS     L  L R H    A+AA   A    F  ++ DLIY  P +T   
Sbjct: 141 AGFTRVSLGMQSAAPHVLAVLDRIHTPGRAVAAAREATAAGFDHVNLDLIYGTPGETDAD 200

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +   L   VDH+S Y L +E GT   +  + G++  P ++V  D Y +     +  
Sbjct: 201 LHASIDAVLDAGVDHVSAYALIVEDGTALARRIRRGEMPAPDDDVLADRYRILDRRLTDA 260

Query: 247 GLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G   YE+SN +     E  HNL YWR  D+ GIGPGAHS V    + V     KHP  + 
Sbjct: 261 GFSWYEVSNWARSASGECRHNLAYWRSDDWWGIGPGAHSHV----NGVRWWNVKHPARYA 316

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           + + +        E L+ E +  E +M+  R REG+   
Sbjct: 317 QTLGERHLPRASSETLTPEDRHVETVMLTARCREGLPAS 355


>gi|212550789|ref|YP_002309106.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|212549027|dbj|BAG83695.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
          Length = 371

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 195/388 (50%), Gaps = 36/388 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC  +C YCDF S     YK    +++     E++  +      +I +I+FGG
Sbjct: 4   GIYIHIPFCKNRCIYCDFFSTTHLNYKT---HYVNVLCNELEQRKDYLNKHNIGTIYFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GTPSL+   +   I   I +N+ +    + EITIEANP  V             NRISLG
Sbjct: 61  GTPSLLSFPDFEKIFRTIQENFLIEGFEDKEITIEANPEDVNDRFLTLINCFSFNRISLG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  ++ L FLGR H+A  A+ A+ +  +  F  ++ DLIY LP Q++  WE  +Q+A+
Sbjct: 121 VQSFRDEELIFLGRKHDAYSAVKAVENCQKKGFLNINVDLIYGLPGQSLKAWETTVQQAI 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEIS 254
           S  + H+S Y LT E+GT    M + G L+ P + + +++++ +        G   YEIS
Sbjct: 181 SLNISHISAYHLTYEQGTKLDCMQRQG-LIRPVDELESLEMFEILIDKLLTAGFEHYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSR-------VKVGSHRVAISIEKHPESWLKM 307
           N +     S+HN+ YW    Y+G+G  AHS         +V S R+              
Sbjct: 240 NFASPTYYSMHNIGYWNGSHYLGVGASAHSYNGKTRQWNRVDSGRIF------------- 286

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--Q 365
                + + E E ++ +   ++F++  +R  +GI + +  +L G    + C    ++   
Sbjct: 287 -----NYLPEIEIMNDKTTYNDFIITRIRTMKGIDLDELLLLCGEEKKLYCLNRAEKYMN 341

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
             + ++  + L+ T++G+ + D ++ +L
Sbjct: 342 NHLLQIISNHLQLTRKGLFVSDGIMCDL 369


>gi|257869207|ref|ZP_05648860.1| coproporphyrinogen III oxidase [Enterococcus gallinarum EG2]
 gi|257803371|gb|EEV32193.1| coproporphyrinogen III oxidase [Enterococcus gallinarum EG2]
          Length = 388

 Score =  182 bits (463), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 170/329 (51%), Gaps = 10/329 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
            S   Y+H PFC   C YCDFN   + +  GQ  + +I+  L E+          +  +I
Sbjct: 11  TSTSAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIECLLKEIALTVSKQPITTCETI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +    + L++ GI +     +  E T+EANP  +  +     +  G++R+S
Sbjct: 68  YIGGGTPTSLSAAQLDLLITGIHELLPTQTTKEFTVEANPGDLTEDKLLVLKNLGIDRLS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+ + + L+ +GR H A +    I L  ++ F  ++ DLIYALP QTM  +   L R
Sbjct: 128 MGVQTFDNRLLKKIGRKHTAEDVYQTIRLLDKHDFQNITIDLIYALPGQTMESFRDTLTR 187

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+   + H ++Y L +E  T+F    + G + LPS+     ++    +  +  GL  YEI
Sbjct: 188 AIDLGLPHYAMYSLILENKTMFMNWVRQGKMELPSQESETQMFEEAITAMAKAGLSQYEI 247

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN S  G ES HNL YW    Y G G GA   +    ++    I+     +L+ +R++  
Sbjct: 248 SNFSRPGYESKHNLVYWNNEHYYGFGAGASGYIGQTRYKNFGPIQH----YLRPLREDQL 303

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            + E E L++  Q +E + +GLR ++G+S
Sbjct: 304 PIHETESLTTSNQMEEEMFLGLRKKQGVS 332


>gi|218247390|ref|YP_002372761.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 8801]
 gi|218167868|gb|ACK66605.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8801]
          Length = 414

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 171/340 (50%), Gaps = 11/340 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT---EMQWMRQLTGP---RSISSIF 75
           Y+H PFC ++C YCDF   V   K   + +  S +T   E+     L  P     + ++F
Sbjct: 18  YIHIPFCRRRCYYCDFPISVLGDKT--DIYTASSITHYVEVLCQEILVTPFQGNGLETVF 75

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P ++  IL  + + + + +N EI++E +P++  +   Q Y   G+NR+SL
Sbjct: 76  FGGGTPSLLPPNHLETILSTLDQKFGIFANAEISLEIDPATFTLEQLQRYHDLGINRVSL 135

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+ ++  L   GR H   +   AI     +     S DLI  LP Q++  W   L+ A
Sbjct: 136 GGQAFQDNLLETSGRLHRVKDIFEAIDYIHKVGINNFSLDLISGLPNQSIEDWIFSLETA 195

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  +  HLS Y L +E  T F K +K G   LPS+ +   +Y ++Q I +  G   YEIS
Sbjct: 196 IKISPSHLSCYDLVLEPVTAFGKQYKPGKKPLPSDEITAKMYRISQKILTDAGYDHYEIS 255

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G + LHN  YW    Y G G GA S           + + + E W+  + K    
Sbjct: 256 NYAKPGYQCLHNRVYWENKPYYGFGMGAASYTNQQRFTRPRTRKDYYE-WVNKLSKT-QG 313

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +++ E  S      E LM+GLRL+EGI +     + G+ +
Sbjct: 314 LIDCEVSSKTDFLLETLMLGLRLKEGIKLSFISDVFGKQI 353


>gi|258404588|ref|YP_003197330.1| oxygen-independent coproporphyrinogen III oxidase [Desulfohalobium
           retbaense DSM 5692]
 gi|257796815|gb|ACV67752.1| oxygen-independent coproporphyrinogen III oxidase [Desulfohalobium
           retbaense DSM 5692]
          Length = 391

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 15/381 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H+PFC  KC YC F S    R  +     +      + W R+L  P  + +++ GGG
Sbjct: 12  LYIHFPFCRSKCAYCAFASGPGSREDIAAWTRLVCAEARL-WGRRLAKPE-LQTVYLGGG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGVNRISLGVQ 138
           TPSL+ P+++  ++  +   +     +E T+EANP S +   + +     GVNRIS GVQ
Sbjct: 70  TPSLLPPESLHRLVHTLQSAFVWPQGIEWTLEANPDSFQDPAYAKSLYDLGVNRISFGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+ ++ L  LGR H A++A+ A+ LAR      +S DL++ LP  T+TQWE  L++AL+ 
Sbjct: 130 SMADRELDLLGRAHTAAQAVRAVTLAREAGVSNISLDLLWGLPGHTLTQWEHTLEQALAL 189

Query: 198 AVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              HLS Y LT E  T L   +       LP E++   +Y+ T       GL  YEI+N 
Sbjct: 190 KPRHLSCYGLTPEPDTPLAGDLEARAIPPLPDEDMLTAMYDHTVDALGQFGLEQYEIANF 249

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YW+   Y+G+GP A S ++ GS     +   H  ++ + V +      
Sbjct: 250 AQPGWESQHNSGYWQGWPYLGLGPAAVSTLE-GSR---WTNPTHLAAYARAVTQQTLGQS 305

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQF 373
             + L+  ++  E LM+ LR R G+    +    G +    C      LQ Q   + +  
Sbjct: 306 AHQ-LTCRERCLETLMLQLRTRAGLDCSTFAREFGTDPLTACPELCAQLQNQRLAD-IAA 363

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             LR T  GM M +S+   L+
Sbjct: 364 GTLRLTSAGMLMANSITERLS 384


>gi|256396170|ref|YP_003117734.1| coproporphyrinogen III oxidase [Catenulispora acidiphila DSM 44928]
 gi|256362396|gb|ACU75893.1| oxygen-independent coproporphyrinogen III oxidase [Catenulispora
           acidiphila DSM 44928]
          Length = 408

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 165/334 (49%), Gaps = 11/334 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRS--I 71
             L  Y+H P+C  +C YCDFN++      G   Q  +  + + E++  R + G     +
Sbjct: 30  TPLAFYIHVPYCASRCGYCDFNTYTASELGGGASQATYGATAIEEIRLARTVLGGADLPV 89

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTP+++  +++  +L  +   + ++ + E+T EANP SV        R  G  
Sbjct: 90  QTVFFGGGTPTMLPAKDLVALLGAVRDEFGLAPDAEVTTEANPESVNPAYLAELRAGGFT 149

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+QS  E  L+ L R H      A +  AR   F  ++ DLIY  P ++   W   
Sbjct: 150 RISFGMQSAREHVLQILDRRHTPGRPEACVREAREAGFEHVNLDLIYGTPGESDDDWRAS 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  A+  A DH+S Y L +E GT      K G+L +  ++V  D Y +     +A G   
Sbjct: 210 LDAAIGAAPDHVSAYSLIVEDGTRLAARVKRGELPMIDDDVHADRYLIADEKLAAAGYSW 269

Query: 251 YEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YE+SN +      S HNL YW   ++ G+GPGAHS V  G+    +   KHP ++ + V 
Sbjct: 270 YEVSNWAAAPQGRSRHNLLYWTGANWWGVGPGAHSHVG-GTRWWNV---KHPSAYSQRVA 325

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                   +E L +E +  E +++ LRL  G  +
Sbjct: 326 AGQSPAHAREVLDAEDRRVERILLELRLDSGCDI 359


>gi|229051294|ref|ZP_04194812.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH676]
 gi|228722052|gb|EEL73479.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH676]
          Length = 379

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKNLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFT 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +S HNL YW   +Y G G GAHS V  G     +   K    +   + + G   +
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLK---QYFNKIDETGFPYL 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
           +   ++ +++ +E L +GLR  +G+S   +       +D    + LQ    QG +E  + 
Sbjct: 298 DVHKVTEKERMEEELFLGLRKTKGVSKTAFHNKFNIEMDQVFAKQLQSNQVQGLLEE-ED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 357 GHVRLTRKGKLLGNEVFQSFLI 378


>gi|326336087|ref|ZP_08202259.1| putative coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325691596|gb|EGD33563.1| putative coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 377

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 178/329 (54%), Gaps = 14/329 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDF  H       +   I++   E++ MR+    +++ +++ GGGT
Sbjct: 4   LYIHIPFCRQACHYCDF--HFSTTLKRKPQMIKALCKELE-MRKKEASQTLQTVYLGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN----NFQGYRKAGVNRISLG 136
           PS++  + +  IL  I  ++TV  N EITIE NP    ++    + +  ++ G+NR+S+G
Sbjct: 61  PSILTFEELNEILTTIHYHYTVDPNAEITIEINPDDFTLSKKGISLEQLKELGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E+ LR + R H  S+A   +  A  +F  +S DLIY +P  +  +W   +  ALS
Sbjct: 121 IQSFFEEDLRLMNRAHTVSQAKELLAKAIGLFDNISIDLIYGIPNLSHKRWIENINIALS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           + + HLS Y LT+E  T  Y+  K G +   +++ A + + L + I    G   YE+SN 
Sbjct: 181 FGIPHLSAYALTVEPKTALYQFIKKGKIPPTNDSQAREQFYLLKDILEKEGFIHYELSNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
              G  S +N  YW    Y+GIGP AHS   K  +  +A     H   ++K + + G   
Sbjct: 241 GRKGYFSKNNTAYWEQKHYMGIGPSAHSYNGKERTWNIA-----HNIKYIKQISE-GILP 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVK 344
             KE LS +   +E +M GLR+++GIS++
Sbjct: 295 QGKEVLSLKDLYNERIMTGLRIQKGISLE 323


>gi|257061275|ref|YP_003139163.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 8802]
 gi|256591441|gb|ACV02328.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8802]
          Length = 414

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 172/340 (50%), Gaps = 11/340 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT---EMQWMRQLTGP---RSISSIF 75
           Y+H PFC ++C YCDF   V   K   + +  S +T   E+     L  P     + ++F
Sbjct: 18  YIHIPFCRRRCYYCDFPISVLGDKT--DIYTASSITHYVEVLCQEILVTPFQGNGLETVF 75

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P ++  IL  + + + + +N EI++E +P++  +   Q Y   G+NR+SL
Sbjct: 76  FGGGTPSLLPPNHLETILSTLDQKFGIFANAEISLEIDPATFTLEQLQRYHDLGINRVSL 135

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+ ++  L   GR H   +   AI     +     S DLI  LP Q++  W   L+ A
Sbjct: 136 GGQAFQDNLLETSGRLHRVKDIFEAIDYIHKVGINNFSLDLISGLPNQSIEDWIFSLETA 195

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++ +  HLS Y L +E  T F K +K G   LPS+ +   +Y ++Q I +  G   YEIS
Sbjct: 196 INISPSHLSCYDLVLEPVTAFGKQYKPGKKPLPSDEITAKMYRISQKILTDAGYDHYEIS 255

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G + LHN  YW    Y G G GA S           + + + E W+  + K    
Sbjct: 256 NYAKPGYQCLHNRVYWENRPYYGFGMGAASYTNQQRFTRPRTRKDYYE-WVNKLSKT-QG 313

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +++ E  S      E LM+GLRL+EGI +     + G+ +
Sbjct: 314 LIDCEVSSKTDFLLETLMLGLRLKEGIKLSFISDVFGKQI 353


>gi|120601369|ref|YP_965769.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris DP4]
 gi|120561598|gb|ABM27342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio vulgaris DP4]
          Length = 497

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 184/347 (53%), Gaps = 15/347 (4%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           ++++  +E+       G   + +IFFGGGTPSL+ P  +A ILD + + ++V+   EI++
Sbjct: 126 YVETLFSELALWGDRLGNAPVETIFFGGGTPSLLPPHVVAAILDRVHRTFSVAPGAEISL 185

Query: 111 EANPSSVEVNNFQGYR---KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           EANP S+  +N Q  R    AGVNR+SLGVQ+L++  L  +GR H A +AI A + AR+ 
Sbjct: 186 EANPESL--SNRQQARALYDAGVNRLSLGVQALDDALLHLMGRPHRARDAIRAFNAARDA 243

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F  +S D I+ LP Q + QW  +L+  +    +HLS Y LT+E+GT      + G + L
Sbjct: 244 GFTNISLDFIWGLPGQRLRQWLDQLREVVRLRPEHLSCYGLTLEEGTPLTADVESGSIAL 303

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E     ++          G   YEISN + +G +  HNL YW   DY+G+GP A S +
Sbjct: 304 PVEREQAAMFMQGAERLEEAGYLQYEISNFARMGFQCHHNLGYWEGRDYLGLGPSATSTI 363

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +  +      +W + VR  G    + E L    +  E +M+ LR   G+ VK +
Sbjct: 364 D----GLRWTNPYDHGAWHESVR-TGRIGADAERLDLTVRVLELVMLRLRTTRGLRVKAY 418

Query: 347 EMLAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             L GR+   + +     L R G + R++   LR T+ GM + +S++
Sbjct: 419 RELTGRDFLRDHKPLVHLLHRNGLV-RIRDGYLRLTRNGMLVSNSIL 464


>gi|299144175|ref|ZP_07037255.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518660|gb|EFI42399.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 398

 Score =  182 bits (462), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 169/337 (50%), Gaps = 12/337 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTG 67
           +    +  + +Y+H PFC  +C YCDF S +    + + N   + ++   E+   +    
Sbjct: 15  LNKNSTEDISLYIHVPFCESRCYYCDFYSSI----INENNVNDYFENLYKELFLYKDFLK 70

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            + I SIF GGGTPS + P+ I  +++ I    T+  + EITIE NP+SV     + Y  
Sbjct: 71  DKKIVSIFIGGGTPSSVNPKYIFKLMEKINLISTIEKSCEITIELNPNSVSSEKLKLYLN 130

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQ 186
           + +NR S+G QS  +  L+ +GR H   + I+A  L  +      + DL+ ALP Q    
Sbjct: 131 SKINRFSMGAQSFNDDILKKIGRIHKKEDIISACKLFGKYNIKNFNLDLMLALPSQKFED 190

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            +  ++        H+S Y L +E GT  Y +++   L+ P EN   D+Y+         
Sbjct: 191 IKESIKYIKLLDPAHISYYSLILETGTKLYDINQVNPLIFPDENQDRDMYHYIVHSLDDL 250

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN S    ES HNL YW+  +Y+G+G  +HS +         S EK    +  
Sbjct: 251 GYKQYEISNFSKSEFESKHNLRYWKLKNYLGLGISSHSNINNLRFYNHNSFEK----YYS 306

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +++ +   V + E L ++ + +EF+ MGLRL  GI++
Sbjct: 307 IIKTSNLPVQDFEVLDNKDRINEFITMGLRLNSGINI 343


>gi|317151904|ref|YP_004119952.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942155|gb|ADU61206.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 418

 Score =  182 bits (462), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 196/387 (50%), Gaps = 15/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS 73
           G   L +Y+H PFC  +C YC F+S     +V    + +  L E++ W  +L  P  + +
Sbjct: 36  GDTGLLLYIHVPFCRSRCHYCTFHSQAFN-QVTFAWYHKLLLQEIKLWGARLKRP-PLRT 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNR 132
           I+FGGGTPSLI    +  I+  +   +T+   +E+T+EANP S+ +V+ F+     GVNR
Sbjct: 94  IYFGGGTPSLIPLNQLQQIMKVLDAAFTLGPAMEVTLEANPDSATDVSYFRALLSMGVNR 153

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQSL +  L  +GR H+A+ A A+   AR   F  +  D I+ LP Q +  W  +L
Sbjct: 154 LSLGVQSLSDVDLHAMGRPHSAAMAYASYDSARQAGFGNIGLDFIWGLPGQRLKSWIDQL 213

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKD-GDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               S   +H+S Y LT+E  T    +  + G L LP +     ++        + G   
Sbjct: 214 NVVTSMRPEHISAYNLTLEPNTPMTALCAEGGPLTLPPDKEQGRMFIYGAEYLESMGYMH 273

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN + +G  S HN  YW   DY+G+GP A S +     R      ++ + +   VR 
Sbjct: 274 YEVSNFARMGFVSRHNSGYWGGADYLGLGPSAVSTIG----RRRFENPRYMDEYDAYVR- 328

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGF 367
            G    + E LS      E +M+ LR  +G+ +K++   AG +L    ER    L R+  
Sbjct: 329 GGLVGRDHETLSDADLLKELVMLSLRTAKGLDLKEFRQRAGYDLVKRQERLVMALHRENL 388

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           + R+    LR T+ GM + + +I  LA
Sbjct: 389 V-RINHGFLRLTKNGMLVSNVIIRRLA 414


>gi|306821560|ref|ZP_07455158.1| possible coproporphyrinogen dehydrogenase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550305|gb|EFM38298.1| possible coproporphyrinogen dehydrogenase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 376

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 203/381 (53%), Gaps = 15/381 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFF 76
           LG+Y H PFC  KC YCDF+SHV  YK  + ++I + + E++  ++    +  +I +IF 
Sbjct: 4   LGLYFHIPFCNSKCLYCDFDSHVSAYK-ERHSYIDALIKEIKLAKEKYDLKKYTIDTIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++++   +  +L  I  N++ S ++E +IE NP+S+     +  + + +NRIS+G
Sbjct: 63  GGGTPTVLDNDLLEKLLFEIDGNFSFSDDLEYSIEINPNSIAEEKIKILQNSRINRISIG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  E  L+ LGR+H+ ++       L ++ F  +S DL+  +P Q +  ++  L++ L
Sbjct: 123 LQSANEVELKSLGRSHSYADFENTYSMLKKHGFDNISVDLMMGIPNQNLNSYKNTLEKVL 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                H+S Y L IE GT F  M++ G L+   ++  ++LY+ T     + G   YEISN
Sbjct: 183 KLEPSHISSYMLIIEDGTPFADMYEKG-LIKVDDDFTLELYDYTIDFLKSKGYEQYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +    +  HN+ YW+  +Y+G+G  A S +    +R   S     + +++ +  N   +
Sbjct: 242 FAKNDRKCRHNIRYWKVNEYLGLGQSAASYI----NRARFS--NSDKDYVQSISNNIIPI 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQ 372
            +    + +   +E++ + LR+ EGI + + +   G N      +  ++L+ +  I   +
Sbjct: 296 TDYALQTEKDLYEEWIFLKLRMNEGIIIDEIDEKFGMNFKENYAKVLKSLKNRNLINDYK 355

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
            S L  T+ G  + +S+   L
Sbjct: 356 HS-LSLTREGFKISNSIFLEL 375


>gi|330859006|emb|CBX69364.1| oxygen-independent coproporphyrinogen-III oxidase-like protein yggW
           [Yersinia enterocolitica W22703]
          Length = 278

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 157/278 (56%), Gaps = 11/278 (3%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++  F GGGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+
Sbjct: 3   LAPFFIGGGTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGI 62

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEM 189
           NRIS+GVQS   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   
Sbjct: 63  NRISIGVQSFSAEKLTRLGRIHGPDEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALD 122

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A++    HLS YQLTIE  T F          LP ++   D++     + SA G  
Sbjct: 123 DLRQAIALNPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQ 178

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++  
Sbjct: 179 QYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-- 236

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              G  + ++  + +  +  EF M   RL E     D+
Sbjct: 237 ---GKYLDKQYEVEAADRPFEFFMNRFRLLEAAPRADF 271


>gi|255039505|ref|YP_003090126.1| oxygen-independent coproporphyrinogen III oxidase [Dyadobacter
           fermentans DSM 18053]
 gi|254952261|gb|ACT96961.1| oxygen-independent coproporphyrinogen III oxidase [Dyadobacter
           fermentans DSM 18053]
          Length = 374

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 187/379 (49%), Gaps = 12/379 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDF  H       +    ++   E+   +       + +I+FGGGT
Sbjct: 3   LYIHIPFCKQACHYCDF--HFSTNTTQKRAMAEAIAREIVLRKSYLPDGDMETIYFGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS+++   + L+LD + +++ V+   EIT+EANP  +   +   + +AG+NR+S+G+QS 
Sbjct: 61  PSMLDEAELHLLLDTVHRHFRVAPGAEITLEANPDDLNAASLSMFARAGINRLSIGIQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E  LRF+ R H A EA   + +A+N     +S DLIYA+P +       +L +A +  V
Sbjct: 121 HEPHLRFMNRAHTALEAKQCVKIAQNAGIDNISIDLIYAIPSENHDILHADLAQAFALNV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LTIE  T F    K   +    E  A   + +        G   YEISN +  
Sbjct: 181 PHISAYCLTIEPQTAFGSWLKKKKIKPIEEEYAAQQFEMLVGSLCGEGYEQYEISNFARN 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HN +YW+   Y+G+GP AHS     +    +S   H   +L  ++K G      E
Sbjct: 241 GRYSRHNSSYWKQHPYLGVGPSAHSYNGT-TREFNVS---HNAKYLDALQK-GIIPATVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRL 376
            L+     +E+L+ GLR   G+ ++    L+      +  R L    R+G++ R     L
Sbjct: 296 TLTGADNTNEYLLTGLRTIWGVDLQKLHELSNGAFAAQHRRQLDGMIRKGWV-REDSGTL 354

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R T+ G    D + ++L +
Sbjct: 355 RLTEAGKLFADRISSDLFI 373


>gi|257865921|ref|ZP_05645574.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC30]
 gi|257872254|ref|ZP_05651907.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC10]
 gi|257799855|gb|EEV28907.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC30]
 gi|257806418|gb|EEV35240.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC10]
          Length = 396

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 10/337 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLT 66
           N+ + + + ++  Y+H PFC   C YCDFN   + +  GQ  + +I++ L E++      
Sbjct: 8   NDPSTKSAQNISAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIEALLKEIELSLLRQ 64

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                 +I+ GGGTP+ +    +  +L G+ +     +  E T+EANP  +        +
Sbjct: 65  PINEAETIYIGGGTPTSLSANQLDRLLSGVHELLPTHTTKEFTVEANPGDLSEEKMLVLK 124

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMT 185
              V R+S+GVQ+ + + L+ +GR H A +  + I L  ++ F  ++ DLIYALP Q++ 
Sbjct: 125 NHQVTRLSMGVQTFDNRLLKKIGRKHTAEDVYSTIQLLEKHDFQNVTIDLIYALPGQSIE 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L RA+   + H ++Y L +E  T+F    + G + LPS+     +++   +  + 
Sbjct: 185 SFRDTLTRAIDLGLPHYAMYSLILENKTMFMNWVRQGRMALPSQEAETQMFDEAIAAMTK 244

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            GL+ YEISN +  G ESLHNL YW    Y G G GA   +    ++    I+     +L
Sbjct: 245 AGLNQYEISNFARPGYESLHNLVYWNNEHYFGFGAGASGYIGQTRYKNKGPIQH----YL 300

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           K +++N   + E E L++  Q +E L +GLR + GIS
Sbjct: 301 KPLQENQLPIHETEELTTSNQMEEELFLGLRKKAGIS 337


>gi|320103904|ref|YP_004179495.1| oxygen-independent coproporphyrinogen III oxidase [Isosphaera
           pallida ATCC 43644]
 gi|319751186|gb|ADV62946.1| oxygen-independent coproporphyrinogen III oxidase [Isosphaera
           pallida ATCC 43644]
          Length = 395

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 191/381 (50%), Gaps = 19/381 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT--EMQWMRQLTG-PRSISSIFFG 77
            YVH PFC  KC YCDF S       G ++    +L   E +  R L G P  + ++F G
Sbjct: 25  AYVHIPFCAHKCGYCDFAS-----LAGADHLADRYLDALEREIERVLEGRPAPVETVFVG 79

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  +   ++  + + S  E T+EANP +++ +  +   + GVNRISLG 
Sbjct: 80  GGTPTRLTAAQLERLTAMVSSWFPLVSGGEWTVEANPGTLDRDKVEVLVQGGVNRISLGA 139

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS + +SL  L R H+ +E +  + L  + F R S DLI+ +P  T+  W+ +L  AL+ 
Sbjct: 140 QSFQRRSLAILERAHDPAEVVRGVELIASRFDRWSLDLIFGVPGSTLNDWKADLSAALAL 199

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y L  EKGT  +K  + G++    + +   +++ T       GL AYEISNH+
Sbjct: 200 GPSHLSCYGLIFEKGTPLWKRRRRGEVSSVPDELERAMFDHTVETLETAGLSAYEISNHA 259

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YW    + G+G GA +  + G   V     +   ++L  +      +  
Sbjct: 260 RPGHECRHNLIYWANEPFYGVGLGAAA-YRNGERTVNT---RDLNAYLARIEAGRSPIGP 315

Query: 318 KEFLSSEQQADEFLMMGL-RLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQ 372
           +E L    +A E  M+ L R+  GI   ++ +  G +LD        ++LQR G++E   
Sbjct: 316 RERLEPRARAGETAMLMLRRVVLGIDRAEFRLRTGYDLDTLYSDVIAKHLQR-GWLED-D 373

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             R+R T+    + D+V+ + 
Sbjct: 374 GRRVRLTRASWFLSDAVMVDF 394


>gi|255522665|ref|ZP_05389902.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-175]
          Length = 363

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 179/337 (53%), Gaps = 12/337 (3%)

Query: 32  CPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP-RSISSIFFGGGTPSLIEPQN 88
           C YCDFN   + +  GQ  + ++   + EM+ +    GP   + ++F GGGTP+ +    
Sbjct: 3   CYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKGPIAPVDTVFVGGGTPTTLNEAQ 58

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS   + L+ +
Sbjct: 59  IARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQSFNNELLKKI 118

Query: 149 GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   +   ++   R I F  +S DLI++LP QT   ++  L++AL   + H S Y L
Sbjct: 119 GRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLDLPHYSAYSL 178

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN +  G +S HN+
Sbjct: 179 IIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNI 238

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
            YW    Y G G GAH  V    +     I+K    +++ ++KN     +++ L+ +++ 
Sbjct: 239 TYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQKNILPTFQQKELTLKEKM 294

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           +E + +GLR  +G+  K ++   G++LD      +Q+
Sbjct: 295 EEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQK 331


>gi|254304212|ref|ZP_04971570.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324404|gb|EDK89654.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 367

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 195/376 (51%), Gaps = 19/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      + ++   L E++ + ++        +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGTDNQIKKYVNYLLKEIEIYKKKYDLSEKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   +    L+ I   ++   N EITIE NP +V  N  + YRK G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDS----LEKILSKFSYDKNTEITIEVNPKTVNSNKLKEYRKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  + +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT++  + +L+R ++ 
Sbjct: 121 TFNDDNLKLLGRIHNSEEAIEVYNLARECRFDNISLDIMFSLPNQTLSILQDDLERLVNL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S+Y L  E+GT F++  K G L     ++  ++Y        +     YEISN S
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEANMYEYIIEFLKSKDYIHYEISNFS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E+ HN  YW    Y+G+G  A   +    ++   ++    + +   + KN   + E
Sbjct: 241 KKDFEARHNSIYWENKQYLGVGLSAAGYLANVRYKNFFNL----KDYYNNLDKNILPIDE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L+ E       ++G RL   + V   + L       +C  +L ++G++   +   + 
Sbjct: 297 REILTEEDIEQYRYLVGFRLLNKVIVPSEKYLD------KC-VSLSKEGYLLEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANL 393
            + +G+ + +  I+N 
Sbjct: 349 LSHKGLMLFNDFISNF 364


>gi|256026885|ref|ZP_05440719.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289764877|ref|ZP_06524255.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716432|gb|EFD80444.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 367

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 200/377 (53%), Gaps = 21/377 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
             Y+H PFC +KC YCDF S ++      E ++   L EM+ + ++    +   +I+FGG
Sbjct: 6   NTYIHIPFCERKCNYCDFTS-LKGSDSQIERYVNYLLKEMEIYSQKYDLSQKQDTIYFGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+   ++  IL      ++   N EITIE NP +V+ N  + YRK G+NR+S+G+Q
Sbjct: 65  GTPSLLPIDDLKKIL----SKFSYDKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++ +L+ L R HN+ EAI   +LAR   F  ++ D++++LP QT+   + +L++ +S 
Sbjct: 121 TFDDDNLKVLDRIHNSQEAIEVYNLARECGFKNINLDIMFSLPNQTLAMLQNDLEKLVSL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
             +H+S+Y L  E+GT F++  K G       ++  ++Y  + + + S   +H YEISN 
Sbjct: 181 NPNHISIYSLIWEEGTKFFRDLKAGKFKETDNDLEANMYEYIIEYLKSKEYIH-YEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES HN  YW   +Y+G+G  A   +    ++   ++    + +   + K+   V 
Sbjct: 240 SKKDFESRHNSIYWENKNYLGVGLSAAGYLGNVRYKNFFNL----KDYYNNLDKDILPVD 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           EKE L+ +       ++G RL   I V   + L        C  +L ++G++ + +   +
Sbjct: 296 EKEILTEKDIEQYRYLVGFRLLNKIIVPSKKYLK------RC-VSLCKEGYLIKKENGYI 348

Query: 377 RCTQRGMTMLDSVIANL 393
             + +G+ + +  I N 
Sbjct: 349 -LSHKGLMLFNDFILNF 364


>gi|262195766|ref|YP_003266975.1| oxygen-independent coproporphyrinogen III oxidase [Haliangium
           ochraceum DSM 14365]
 gi|262079113|gb|ACY15082.1| oxygen-independent coproporphyrinogen III oxidase [Haliangium
           ochraceum DSM 14365]
          Length = 385

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 189/397 (47%), Gaps = 42/397 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +GVYVH P+C   CPYCDF  S V R  +    ++ +   E+       G R + SI+ G
Sbjct: 1   MGVYVHVPWCRTLCPYCDFAVSVVGRSGIPHRAYLDALCAELSERAPALGDRELVSIYLG 60

Query: 78  GGTPSLIEPQNIALILDGI-----AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           GGTPSL EP  +A ++D +     A++      +EIT+EANP          +R+ GVNR
Sbjct: 61  GGTPSLWEPACVAALIDAVTAALGARSALARGALEITLEANPQDCAPERLAAWRQGGVNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+GVQSL  Q+L  LGR+H      A        F R+S D I+ +P     + +  L 
Sbjct: 121 LSIGVQSLRPQALAVLGRSHLGDGMAALAAARAAGFTRVSADAIFGVPGAAADRDDSALD 180

Query: 193 RAL----SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           R++    +  V HLS+Y+LTIE  T + K  + G +   +E+V    Y       +A G 
Sbjct: 181 RSIEALAATGVGHLSVYELTIETRTAYGKAVRAGRMQPLAEDVLAAQYEAVHRALAARGY 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS---RVKVGSHRVAISIEKHPESWL 305
             YEIS+++  G  ++HN  YW   +Y+G+G GA S   R   G  R       H  ++L
Sbjct: 241 QHYEISSYARPGHRAVHNSLYWSGAEYLGLGCGAASFLLREGGGGERATNLRSVH--AYL 298

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK---------DWEMLAGRNLDI 356
           +   +    V  +E LS +  A + + +G+R  +GI            DW +        
Sbjct: 299 RA--RGDQRVAAREQLSPQDVALDRVWLGMRTIDGIPAAALARAPELVDWLL-------- 348

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             ER + R+G        RL  T RG +  D + + +
Sbjct: 349 -SERLVTREG-------ERLCPTLRGFSYADRIASRM 377


>gi|257875548|ref|ZP_05655201.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC20]
 gi|257809714|gb|EEV38534.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC20]
          Length = 396

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 10/337 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLT 66
           N+ + + + ++  Y+H PFC   C YCDFN   + +  GQ  + +I++ L E++      
Sbjct: 8   NDPSTKSAQNISAYIHIPFCEHICYYCDFN---KVFLEGQPVDEYIEALLKEIELTLLRQ 64

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                 +I+ GGGTP+ +    +  +L G+ +     +  E T+EANP  +        +
Sbjct: 65  PINEAETIYIGGGTPTSLSANQLDRLLSGVHELLPTHTTKEFTVEANPGDLSEEKMLVLK 124

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMT 185
              V R+S+GVQ+ + + L+ +GR H A +  + I L  ++ F  ++ DLIYALP Q++ 
Sbjct: 125 NHQVTRLSMGVQTFDNRLLKKIGRKHTAEDVYSTIQLLEKHDFQNVTIDLIYALPGQSIE 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L RA+   + H ++Y L +E  T+F    + G + LPS+     +++   +  + 
Sbjct: 185 SFRDTLTRAIDLGLPHYAMYSLILENKTMFMNWVRQGRMALPSQEAETQMFDEAIAAMTK 244

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            GL+ YEISN +  G ESLHNL YW    Y G G GA   +    ++    I+     +L
Sbjct: 245 AGLNQYEISNFARPGYESLHNLVYWNNEHYFGFGAGASGYLGQTRYKNKGPIQH----YL 300

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           K +++N   + E E L++  Q +E L +GLR + GIS
Sbjct: 301 KPLQENQLPIHETEELTTSNQMEEELFLGLRKKAGIS 337


>gi|269218590|ref|ZP_06162444.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211701|gb|EEZ78041.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 403

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 188/388 (48%), Gaps = 22/388 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQE--NFIQSFLTEMQWMRQL-----TG 67
           S  L  YVH PFC  +C YCDFN++    +  G    +F +S   E+   R +      G
Sbjct: 22  SGGLSAYVHVPFCAVRCGYCDFNTYTNLDFGPGASTSDFPESLAREIALSRGVLRGGEAG 81

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  I ++FFGGGTP++++P  +  +L  +   + +    E T EANP SV+  +      
Sbjct: 82  PL-IDTVFFGGGTPTMLDPGQLGSVLAALDAAFGLREVAEATTEANPESVDRESLFQLAD 140

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG  R+S G+QS  E  L  L R H   +   A+  AR     +S DLIY  P +TM QW
Sbjct: 141 AGFTRVSFGMQSAVESVLATLDRRHTPGQVGRAVGWAREAGLDVSVDLIYGAPGETMGQW 200

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              ++ A++   DHLS Y LT+E GT        G + LP  +   D Y        A G
Sbjct: 201 RRSVEAAIALEPDHLSAYALTVEPGTKMGAQASRGAIRLPDPDELADKYEAADEAFEAAG 260

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN +  G E  HN  YW  G++ G GPGAHS +  G+    +   KHP ++ + 
Sbjct: 261 YRWYEISNWARAGRECRHNRVYWGGGNWWGYGPGAHSHIN-GTRFWNV---KHPLAYARR 316

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           V         +E L+  + ADE +M+G+R+REGI +        R +  +    L   G 
Sbjct: 317 VAAGESPAAAREVLTVSESADEAVMLGIRMREGIEIP-------RFISAQTTAGLVADGL 369

Query: 368 IE-RVQFS-RLRCTQRGMTMLDSVIANL 393
           ++ R   + R+  T RG  + D+V   L
Sbjct: 370 LDGRAAVAGRIVLTLRGRLLADAVTRRL 397


>gi|56751732|ref|YP_172433.1| coproporphyrinogen III oxidase [Synechococcus elongatus PCC 6301]
 gi|81301191|ref|YP_401399.1| coproporphyrinogen III oxidase [Synechococcus elongatus PCC 7942]
 gi|56686691|dbj|BAD79913.1| oxygen independent coprophorphyrinogen III oxidase [Synechococcus
           elongatus PCC 6301]
 gi|81170072|gb|ABB58412.1| coproporphyrinogen III oxidase, anaerobic [Synechococcus elongatus
           PCC 7942]
          Length = 396

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 195/394 (49%), Gaps = 32/394 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLT---GPRSISS 73
           +  Y+H PFC ++C YCDF   V   R +  Q   I+ ++  +      T   GP ++ +
Sbjct: 6   IAAYLHIPFCRRRCFYCDFPISVVGDRLRGDQSGMIRQYVDAICQEIAATPVLGP-ALQT 64

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  +  IL  + + + +++  EI+IE +P+S + +     R+ G NR+
Sbjct: 65  VFFGGGTPSLLSPNQLDRILQTLDRRFGIAATAEISIEMDPASFDRSQAIATRQLGFNRV 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G Q+ ++  L   GR H  ++   A+   R   F  +S DLI  LP+QT+  W+  L+
Sbjct: 125 SIGAQAFQDGLLERCGRTHRRADIDRAVADLRAAGFENLSLDLISGLPEQTLADWQASLE 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++    HLS Y L +E  T+F K ++ GD  LP++     +Y L      A G   YE
Sbjct: 185 AAIALEPTHLSAYDLVLEPETVFGKRYQPGDRPLPADEQTAVMYRLAHRTLEAAGFEHYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEKHPESWLKMVR 309
           ISN++  G +  HN  YW+   + G G GA S +   + G  R      +  + ++ +  
Sbjct: 245 ISNYARSGFQCRHNRVYWQDQSFYGFGVGATSALQGQRFGRPR------RRADYFIWLET 298

Query: 310 KNGHAVVEKEFLSSEQQA-DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
               A       S    A  E LM+GLRL EG+   DW  L  +    E  R+L  Q  I
Sbjct: 299 PGAIAAACAPVTSDPADALAETLMLGLRLAEGL---DWTALE-QPFGAEILRSL--QPVI 352

Query: 369 ERVQFS--------RLRCTQ-RGMTMLDSVIANL 393
           +R Q +        RL  TQ  GM   + V+A+L
Sbjct: 353 QRYQQAGWLQWQGDRLSLTQPEGMLFSNQVLASL 386


>gi|168013912|ref|XP_001759509.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689439|gb|EDQ75811.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 459

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 185/347 (53%), Gaps = 18/347 (5%)

Query: 21  VYVHWPFCVKKCPYCDF---------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           VYVH PFC ++C YCDF         +++      G  +++     E++   ++   + +
Sbjct: 28  VYVHIPFCRRRCFYCDFPIVAVGERTDTNKAHMDAGMTDYVDLVCREIRLAAKVNSSKPL 87

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P  +  I+D + +++ + S  EI++E +P + +V++ +     G++
Sbjct: 88  QTVFFGGGTPSLLPPPLLLRIIDTLHEHFGIDSGAEISMEMDPGTFDVHSLRQLMDGGLS 147

Query: 132 RISLGVQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S+GVQS +   L   GR+H  SE   AI AIH +       S DLI +LP Q++  WE
Sbjct: 148 RVSMGVQSFQGALLESCGRSHGLSEVYEAIEAIHASG--LNNWSLDLISSLPHQSLQDWE 205

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +  A+  +  H+S+Y L IE+GTLF K +K G   LPS++ A + Y +  +     G 
Sbjct: 206 HSINEAVKASPAHVSVYDLQIEEGTLFNKWYKPGQSPLPSDDNAAEFYRMASAKLQDAGF 265

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKM 307
             YEISN++  G +  HNL YW    Y   G G+ S   +G  R +   + K    +++ 
Sbjct: 266 AHYEISNYAKEGFQCRHNLVYWNNLPYFAFGLGSTS--YIGGRRFSRPRKFKQYREFVEQ 323

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
              +G  V+E    S+E +A + +M+ LRL  G+ ++ +    G  L
Sbjct: 324 FESSG-GVIECPQDSTEDRALDVIMLSLRLARGLDIQAFSQRFGAGL 369


>gi|78189762|ref|YP_380100.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium chlorochromatii CaD3]
 gi|78171961|gb|ABB29057.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium chlorochromatii CaD3]
          Length = 374

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 179/376 (47%), Gaps = 6/376 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SL +Y+H PFC ++CPYCDF       +V  E F  +   E  +        +IS+I  G
Sbjct: 2   SLSLYLHIPFCRERCPYCDFYLITGTGQV--EPFFAALARETAFRADELQGATISAIHIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    ++  L+ +A   T +  +E+ +EANP  +        +  GVNR+S+GV
Sbjct: 60  GGTPSLVPVAMLSRWLEQLACYATFAPTMELALEANPEDITPALLDELQSLGVNRLSIGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   Q L  LGR H+A++A+    +A   F  +S DL+  LP +T+  WE +L  AL+ 
Sbjct: 120 QSFSIQKLTVLGRKHSATDALRVTEMALERFASVSLDLMCGLPHETLAVWEGDLSTALAL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS+Y L+IE  T F+ +   G+L  P E      Y          G   YE+SN  
Sbjct: 180 QPHHLSVYMLSIEPKTRFHWLVARGELPAPMEAEQALFYETAIHTIKLQGYQHYEVSNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S +NL  W    Y+G G  AHS +   +  +    + + ES  + +    +AV  
Sbjct: 240 LPNFHSRYNLASWERKPYLGFGAAAHSFIVQQNREIR---QANIESLSRYLAHPENAVAF 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L   ++  E L + LRL  G+S   +   A R++        Q QG++      R  
Sbjct: 297 REELGCNERFTEELFLTLRLNRGLSRSFFSRTASRDVVETLFATFQEQGWMYEDN-ERFY 355

Query: 378 CTQRGMTMLDSVIANL 393
            T+RG    D +   L
Sbjct: 356 LTERGFLFADYIAEEL 371


>gi|228923070|ref|ZP_04086362.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228836568|gb|EEM81917.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 379

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 185/389 (47%), Gaps = 27/389 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     S+ +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSMKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   +  L  A  
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFM 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN 
Sbjct: 182 LGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KVGSHRVAIS-IEKHPESWLKMVR 309
           S    +S HNL YW   +Y G G GAHS V       VG  +   + I++    +L +  
Sbjct: 242 SKGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGPLKQYFNKIDETRFPYLDV-- 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQG 366
              H V EKE +  E      L +GLR  +G+S   +       +D    + L   Q QG
Sbjct: 300 ---HKVTEKERMEEE------LFLGLRKTKGVSKTSFRNKFNVEMDQVFAKQLQSNQEQG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +E  +   +R T++G  + + V  +  +
Sbjct: 351 LLEE-EDGHVRLTRKGKLLGNEVFQSFLI 378


>gi|308177470|ref|YP_003916876.1| coproporphyrinogen oxidase [Arthrobacter arilaitensis Re117]
 gi|307744933|emb|CBT75905.1| coproporphyrinogen oxidase [Arthrobacter arilaitensis Re117]
          Length = 409

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 187/390 (47%), Gaps = 26/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTG----P-R 69
           ++  YVH PFC  +C YCDFN++          Q  +  +   E+ + R++      P R
Sbjct: 29  TMSFYVHIPFCTVRCGYCDFNTYTATEPGSGSSQATYAATVSKEISFAREVMDRSGQPHR 88

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++FFGGGTP+L+   ++  +L  I + + +    EIT EANP SV   + Q     G
Sbjct: 89  EIETVFFGGGTPTLLPASDLVSVLGQIREEFGLKPGAEITTEANPDSVTRESLQELADGG 148

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S G+QS     L+ L R H+      A+  AR     +S DLIY  P +++  W  
Sbjct: 149 FTRVSFGMQSAVPHVLKVLERTHDPKRVPQAVAWAREAGLDVSVDLIYGTPGESLEDWRT 208

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++ ALSY  DH+S Y L IE+GT      + G +    ++   + Y L   + +A G  
Sbjct: 209 SIEAALSYEPDHISAYALIIEEGTKLAAQIRRGQVPNIDDDDHAEKYQLADEMFAAAGFS 268

Query: 250 AYEISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            YE+SN S   A +  HN+ YW+ GD+ G GPGAHS   VG  R      KHP ++ + +
Sbjct: 269 WYEVSNWSKKPANACQHNIAYWKGGDWWGAGPGAHSH--VGGLRWWNV--KHPAAYQQRI 324

Query: 309 RKN---GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
                 GH    +E+  ++    E  M+  RL  G+ + + E    + +       L   
Sbjct: 325 DAGISPGHG---REYPDAQAVQLERTMLLTRLSSGMQISELEETGRKKV-----AGLIAD 376

Query: 366 GFIE-RVQFS-RLRCTQRGMTMLDSVIANL 393
             IE +  F+  L  TQRG  + D V+  L
Sbjct: 377 ELIEPKAAFAGTLVLTQRGRLLADLVVREL 406


>gi|297797323|ref|XP_002866546.1| hypothetical protein ARALYDRAFT_496512 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312381|gb|EFH42805.1| hypothetical protein ARALYDRAFT_496512 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 484

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 183/358 (51%), Gaps = 45/358 (12%)

Query: 21  VYVHWPFCVKKCPYCDF------------NSHVRRYKVGQE------NFIQSFLTEMQWM 62
            YVH PFC K+C YCDF             S    Y+ G+E      N++   + E+Q  
Sbjct: 58  AYVHLPFCRKRCHYCDFPILALGTSSSSLTSPSNVYEEGKEDDPRITNYVNLLVREIQAT 117

Query: 63  RQL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R    T P ++ ++FFGGGTPSL+ P+ ++LIL+ ++ N+ +S + EI++E +P + +  
Sbjct: 118 RTDYDTNP-NLETVFFGGGTPSLVPPKLVSLILETLSLNFGLSPDAEISMEMDPGTFDGQ 176

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +   K GVNR+SLGVQ+ +++ L+  GR H  S+   AI   +       S DLI +L
Sbjct: 177 KLKELMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKECGVENWSMDLISSL 236

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  WE  L+ A+    +H+S+Y L +E+GT F  ++  G   LPSE  + + Y   
Sbjct: 237 PHQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTPGQSPLPSETQSAEFYKTA 296

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----------RVKV 288
            S+    G   YE+S++S  G +  HNL YW+   +   G G+ S           R+K 
Sbjct: 297 SSMLRGAGYEHYEVSSYSKDGFKCKHNLKYWKNKPFYAFGLGSASYVGGLRFSRPRRLKE 356

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            ++ VA  +E    +W      NG   +       +  A + LM+  R  +G+ +K++
Sbjct: 357 YTNYVA-DLENGAANWC----GNGDVDL-------KDVATDILMLSFRTSKGLELKEF 402


>gi|308798795|ref|XP_003074177.1| coproporphyrinogen III oxidase (ISS) [Ostreococcus tauri]
 gi|116000349|emb|CAL50029.1| coproporphyrinogen III oxidase (ISS) [Ostreococcus tauri]
          Length = 458

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 152/304 (50%), Gaps = 18/304 (5%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-----------RRYKVGQE 49
           ++  SA    +          YVH PFC  +C YCDF   V           R Y     
Sbjct: 30  VRSFSADRAKLPASTRAPTSAYVHLPFCRSRCYYCDFAISVIGTRTDASEGMRAYAEAVT 89

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
              ++  T M+     +G + + +IFFGGGTPSL+    +  IL  + + + ++S  EI+
Sbjct: 90  RETRATATRMRERYGASGIKPLETIFFGGGTPSLVPVDVLGEILGTLRREFGIASGAEIS 149

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-F 168
            E +P +   +  +G+   GVNR+SLGVQS +++ L+  GR+H+  EA  AI + R+   
Sbjct: 150 AEMDPGTFNEDKLRGFLDLGVNRVSLGVQSFDDEVLKRAGRSHDVREAELAIEMLRSCGV 209

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH-----KDGD 223
           PR S DLI  LP      W   L R +    DH+S+Y L +EKGT FY+ +     +DG 
Sbjct: 210 PRWSVDLIGGLPGVDAKTWRASLDRVIESGADHVSVYDLQVEKGTAFYRWYGENAKEDGS 269

Query: 224 L-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
              LPSE+ + D +    +   A G   YE+S+++  GA   HN  YW+ G + G G  A
Sbjct: 270 RPALPSEDASADAFREASAALRAAGYEHYEVSSYAKPGARCKHNQIYWQNGGWYGFGMSA 329

Query: 283 HSRV 286
            S V
Sbjct: 330 TSHV 333


>gi|228472779|ref|ZP_04057537.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga gingivalis ATCC 33624]
 gi|228275830|gb|EEK14596.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga gingivalis ATCC 33624]
          Length = 377

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 179/332 (53%), Gaps = 14/332 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDF  H       +   +++   E++ +R++     + +I+FGGGT
Sbjct: 4   LYIHIPFCRQACHYCDF--HFSTTLKRKPQMVKALCKELE-LRRVEASTPLQTIYFGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV----NNFQGYRKAGVNRISLG 136
           PS++    +  I   I K++ ++S  EIT+E NP          + +  ++ G+NR+S+G
Sbjct: 61  PSVLTSVELQEIFSTIHKHYRIASGAEITMEVNPDDFSTPKSELSLELLKELGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS  E+ L  + R H A +A   I  A   F  ++ DLIY +P  T+ +W+  + +ALS
Sbjct: 121 VQSFFEEDLLLMNRAHTAEQAKDFIAQAIQYFDNITLDLIYGIPGMTLARWKENILQALS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           + + HLS Y LT+E  T  Y+  K G +   ++  A + + L + +  A G   YE+SN 
Sbjct: 181 FGIPHLSAYALTVEPRTALYQFIKKGKIPPTNDGQAKEHFYLLKDLLEAKGFIHYELSNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
              G  S +N  YW    YIGIGP AHS    G  R+  IS   H   +++ + + G   
Sbjct: 241 GKEGYFSRNNTAYWEQKPYIGIGPSAHSY--TGEERMWNIS---HNIKYIEQISQ-GILP 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            E+E LS + + +E +M GLR+++GIS +  E
Sbjct: 295 QERETLSLKDRYNERIMTGLRIQKGISTEAIE 326


>gi|313676641|ref|YP_004054637.1| oxygen-independent coproporphyrinogen iii oxidase [Marivirga
           tractuosa DSM 4126]
 gi|312943339|gb|ADR22529.1| oxygen-independent coproporphyrinogen III oxidase [Marivirga
           tractuosa DSM 4126]
          Length = 376

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 176/326 (53%), Gaps = 10/326 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   +++   E++  +       + SI+FGGG
Sbjct: 3   GIYIHIPFCKQACFYCDF--HFSTNMAIKNEMVEAICKEIELQQDYLKGELVESIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++   ++  I   + K+  +SS  EIT EANP  +  +      + G+NR+S+G+QS
Sbjct: 61  TPSVLNEGHLKSIFTKLNKHHRISSEAEITFEANPDDITSSKLDELFQNGINRLSVGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E  L+++ R HN+ +A   +  +  + F   S DLIY +P  +   WE +L+  + + 
Sbjct: 121 FDEDVLKWMNRAHNSKQAFQCLEWINESEFNNFSLDLIYGIPISSHETWEKDLRTLVDFQ 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSAHGLHAYEISNHS 257
             H+S Y LTIE  T+F +  + G L   SE+ A +  Y+L + +  A+  H YE+SN  
Sbjct: 181 PPHISSYCLTIEPDTVFGRWKQKGKLNEASEDYASEQFYHLAEYLRKANYEH-YEVSNFG 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW+   Y+GIGP AHS    G +R   +I  + + +L  ++ N     E
Sbjct: 240 KAGFHSKHNSSYWQQKPYLGIGPAAHSY--DGKNR-QFNISNNAK-YLSAIQTN-EIPAE 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV 343
            + L++E + +E+LM  LR   G ++
Sbjct: 295 LDLLTAEDRINEYLMTSLRTSIGCNL 320


>gi|254457750|ref|ZP_05071178.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
 gi|207086542|gb|EDZ63826.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
          Length = 351

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/344 (36%), Positives = 178/344 (51%), Gaps = 24/344 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC FNS+V ++ + +E ++ + L ++ +   R     +SI S+F GG
Sbjct: 3   LYIHIPFCDSKCSYCAFNSYVDKFHL-KEQYMDALLAQLDFELKRFDASSKSIESVFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + PQ    I + I     + +++EIT EANP+S      QG    GVNRIS GVQ
Sbjct: 62  GTPSTVSPQLYKPIFELIKP--YLQNHIEITSEANPNSATKTWLQGMFDLGVNRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+ L R HN  +A  AI  A NI +  +S DLIYA    T    + +L+ A S 
Sbjct: 120 SFNDKKLKLLNRAHNVQDAKKAILNAHNIGYKNLSLDLIYATLGDTKELLQNDLKTAFSL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++HLS Y LTIE+GT F     +    +  E + +  +     ITS  G   YEISN  
Sbjct: 180 PINHLSAYALTIEEGTPF-----ESKPYMSKETLELTNWIFETIITS--GFKQYEISN-- 230

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F   +S HN  YW Y DYIG+G GA    K+G  R       +P S ++   KN    ++
Sbjct: 231 FGTYKSTHNTGYWEYKDYIGLGSGAVG--KLGLQRF------YPTSVVEDYIKNPFD-IK 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            E L+ E +  E + +GLR   G+          +  DI  + N
Sbjct: 282 VEDLTIEDKKIEQIFLGLRSFIGVETSILNSKEQKRADILVDEN 325


>gi|116327858|ref|YP_797578.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116330742|ref|YP_800460.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116120602|gb|ABJ78645.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124431|gb|ABJ75702.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 387

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 195/385 (50%), Gaps = 25/385 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----- 72
           GVYVH+P+C++KC YCDF S    ++    ++N  Q +  E++  ++++   +IS     
Sbjct: 16  GVYVHYPYCIQKCEYCDFYSLGSGKKPIPNEKNLFQRYQEEIR--QRISDNPTISNLEFD 73

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IFFGGGTPS  +   IA ++D +  N  +S   EIT+E NP  +  +  +   +AG+NR
Sbjct: 74  TIFFGGGTPSRADITQIANLVDFLKNNINISEYSEITMECNPEDITPDFLKSIAQAGINR 133

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+QS   + L+FLGR ++++     +   +N      S DLIY +P Q++ +   ++
Sbjct: 134 ISVGIQSFHPERLQFLGRYYDSNRYENILETVKNSEISNFSADLIYGIPGQSIEEILKDV 193

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + L     H+SLY LT+EKGT + +   D     P E +  ++  L  ++ S + L  Y
Sbjct: 194 FQVLKAGGKHISLYALTVEKGTPYSRKIMDKITPGPEEEIQEEVLKLLPNLLSTYELFQY 253

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN+S  G  S HNL YW    Y+GIGPGAH  +  G +    ++E +         KN
Sbjct: 254 EVSNYSKPGFSSGHNLKYWTMEYYLGIGPGAHGFLPTGRYSNPRNVEAY-------KTKN 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
                 K  L       E ++   RL + IS++ +  L      I   R L+R       
Sbjct: 307 LSKKYTKPDL-----YQELVLSLFRLFQPISMESFYELIPEKKQI-LNRQLKRMEVSGLC 360

Query: 372 QFSR--LRCTQRGMTMLDSVIANLA 394
           +FS    +     +  LDS I  LA
Sbjct: 361 EFSNGIFQWKPEAVLFLDSKILELA 385


>gi|255530294|ref|YP_003090666.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           heparinus DSM 2366]
 gi|255343278|gb|ACU02604.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           heparinus DSM 2366]
          Length = 379

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 192/381 (50%), Gaps = 19/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC K C YCDF+       +  +    +  TE+ +   ++TG   + SI+FGG
Sbjct: 3   GIYIHIPFCKKACTYCDFHFSTSLKYI--DEMTDAICTEIIKKQDRITG--QVGSIYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  ++   I   + +++++SS  EITIEANP  ++       R+  VNR S+G+Q
Sbjct: 59  GTPSVLPARSFEKIFHTLTRHFSISSEAEITIEANPDDLDAKKITELRQLPVNRFSIGIQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E+ L ++ R H+A EA   I  +++  F  +S DLIY  P  T  +W+  +Q+A+ +
Sbjct: 119 SFFEEDLIWMNRAHSAKEAEDCIKRSQDAGFENLSIDLIYGYPLLTDNKWQRNIQKAIEF 178

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              H+S Y LT+E  T      K G  V +  E  A     L   +    G   YEISN 
Sbjct: 179 QTPHISAYSLTVEPRTALASAIKKGKQVPVNEEQSAAQFLTLINKLKEG-GFEHYEISNF 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G  ++HN NYWR   Y+GIGP AH     G +R  ++I  +      +   N    +
Sbjct: 238 SQPGKYAVHNTNYWRGVPYLGIGPAAHGF--DGQNRY-LNIANNAAYLSALQAGNLAETI 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV----Q 372
           E+  LS+  + +E++M  LR   G S++      G+       +++Q   FIE+     Q
Sbjct: 295 EE--LSTYDRFNEYIMTSLRTVWGTSLQKIMADFGKEFLTGTLKSIQP--FIEKQWLINQ 350

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             +L  TQ G    D + + L
Sbjct: 351 NQQLILTQEGKLFADHIASEL 371


>gi|313207123|ref|YP_004046300.1| oxygen-independent coproporphyrinogen iii oxidase [Riemerella
           anatipestifer DSM 15868]
 gi|312446439|gb|ADQ82794.1| oxygen-independent coproporphyrinogen III oxidase [Riemerella
           anatipestifer DSM 15868]
          Length = 373

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 174/322 (54%), Gaps = 7/322 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC+F  H       +++ + +   E+   +     +S+ S++FGGGT
Sbjct: 2   IYLHIPFCKQKCSYCNF--HFSTSLKLKDDILLALKKELYLRQHELENKSLPSLYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++    I  ++D + + +T +S++EIT+EANP  +  +  +      +NR+S+G QS 
Sbjct: 60  PSILSVDEIQRLIDEVLRYFTFNSDIEITLEANPDDLNQSFLKALSNTPINRLSIGTQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ + R H+ASEA ++I  A++  F  +S DLIY  P    + W+  LQ+++   V
Sbjct: 120 FEEDLKLMNRAHSASEAESSIKRAQDTGFENISIDLIYGSPTSNHSLWKESLQKSIELQV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  +   +  P E      +        ++G   YEISN S  
Sbjct: 180 PHISSYALTVEPKTALQKWIEQEKINAPKEEEQFIAFQYLSETLKSNGFEHYEISNFSKP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HN  YW+   Y+GIGP AHS    G  + + +I  +   ++K + +N     E E
Sbjct: 240 NYHSRHNTAYWKGLPYLGIGPSAHSY--DGQKQRSWNIANN-SLYIKSLVENS-LPKETE 295

Query: 320 FLSSEQQADEFLMMGLRLREGI 341
            LS ++Q +E +M+GLR + G+
Sbjct: 296 ILSEKEQFNELIMIGLRTKWGV 317


>gi|302342562|ref|YP_003807091.1| oxygen-independent coproporphyrinogen III oxidase [Desulfarculus
           baarsii DSM 2075]
 gi|301639175|gb|ADK84497.1| oxygen-independent coproporphyrinogen III oxidase [Desulfarculus
           baarsii DSM 2075]
          Length = 385

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 173/339 (51%), Gaps = 6/339 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  LG+YVH PFC  +CPYCDF +         +   ++ L  +  + ++   R +++++
Sbjct: 9   AAGLGLYVHLPFCPGRCPYCDFFAQPFDAAA-AQALARAMLDHLPAVAEMAEGRRLATVY 67

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS+   + +  +L+ + +   + +N EI++EANP ++     +     GVNR+SL
Sbjct: 68  VGGGTPSMWPVRFLGGLLEAVERTIGLEANPEISLEANPGTLGPAKLRLIAACGVNRLSL 127

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G QS +   L+ LGR H   + I  +  AR      +S DLIY LP Q       +++ A
Sbjct: 128 GAQSFQPALLQALGRRHGPEQTIRVVEQARRAGLKNLSVDLIYGLPGQDAALAVADVEAA 187

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++   DHLSLY+LT+   T F + +  G   LP ++    + +      +A  L  YE+S
Sbjct: 188 IALETDHLSLYELTLGPQTPFGRRYVKGRPPLPDDDALAAMEHALLKRLAATPLQRYEVS 247

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +  HN + WR  DY+ +GPGAH    +   R A   +     ++  V      
Sbjct: 248 NFARPGRQCRHNQDTWRGHDYLALGPGAHG--HLAGRRFAFHADVG--RYVSEVAAGRQP 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           +  +E L+++Q+A E  M+GLR  EG+ +     L G +
Sbjct: 304 LAFEEALTAQQRALELFMLGLRTVEGVDLAAVARLLGAD 342


>gi|330686126|gb|EGG97747.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU121]
          Length = 377

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 186/377 (49%), Gaps = 21/377 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFCV+ C YCDFN +    K   + ++ + + EM+   Q    + + +++ GGGTP
Sbjct: 7   YIHIPFCVRICTYCDFNKYFID-KQPVDEYLDALILEMERRTQNANTK-LKTMYVGGGTP 64

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +    +   L  I + +T+    E + EANP  +     +  +  GVNR+S+GVQ+ +
Sbjct: 65  TALNIDQLNKFLSAINRIFTIEG--EFSFEANPDELTFEKVKLLKAFGVNRVSMGVQTFK 122

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  LGR H   +   A+  AR+     +S DL+Y LP+QT+  +E  L  A+   +D
Sbjct: 123 PELLEILGRTHKTEDIYDAVRNARDAGIESISLDLMYHLPQQTLEDFEKSLNLAMKMDID 182

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E  T FY M++ G L LP+E++  ++Y            H YEISN +  G
Sbjct: 183 HISSYGLILEPKTQFYNMYRKGHLKLPNEDLGAEMYQTLMHKIEDSKFHQYEISNFAIEG 242

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HN  YW   +Y G G GA S    G     ++   H   ++K +      ++ +  
Sbjct: 243 HESEHNKVYWLNEEYYGFGAGA-SGYTNGVRYTNVNPVNH---YIKAIANQEEPILTETR 298

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-------IECERNLQRQGFIERVQF 373
            ++ +Q +E + +GLRL  G++   +       +D       IE    L+ +  IE  Q 
Sbjct: 299 PTTNEQMEEEMFLGLRLNCGVNKNKFNEKFNTTIDRIFGQTIIE----LKNRKLIEETQ- 353

Query: 374 SRLRCTQRGMTMLDSVI 390
             +  T+RG  + + V 
Sbjct: 354 DYIYLTERGKVIGNEVF 370


>gi|15242697|ref|NP_201134.1| coproporphyrinogen oxidase-related [Arabidopsis thaliana]
 gi|10177310|dbj|BAB10571.1| oxygen-independent coproporphyrinogen-like protein [Arabidopsis
           thaliana]
 gi|115311487|gb|ABI93924.1| At5g63290 [Arabidopsis thaliana]
 gi|332010345|gb|AED97728.1| oxygen-independent coproporphyrinogen III oxidase [Arabidopsis
           thaliana]
          Length = 484

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 185/357 (51%), Gaps = 44/357 (12%)

Query: 21  VYVHWPFCVKKCPYCDF--------NSHVRR---YKVGQE------NFIQSFLTEMQWMR 63
            YVH PFC K+C YCDF        +S  R    Y+ G+E      N++   + E++  R
Sbjct: 59  AYVHLPFCRKRCHYCDFPILALGMSSSSARPSNVYEEGKEDDPRITNYVNLLVREIKATR 118

Query: 64  QL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               T P ++ ++FFGGGTPSL+ P+ ++LIL+ ++ N+ +S + EI++E +P + +   
Sbjct: 119 TDFDTNP-NLETVFFGGGTPSLVPPKLVSLILETLSLNFGLSPDAEISMEMDPGTFDGQK 177

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +   K GVNR+SLGVQ+ +++ L+  GR H  S+   AI   +       S DLI +LP
Sbjct: 178 LKDLMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKECGVENWSMDLISSLP 237

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+  WE  L+ A+    +H+S+Y L +E+GT F  ++  G   LPSE  + + Y    
Sbjct: 238 HQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTPGQSPLPSETQSAEFYKTAS 297

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----------RVKVG 289
           S+    G   YE+S++S  G +  HNL YW+   +   G G+ S           R+K  
Sbjct: 298 SMLRGAGYEHYEVSSYSRDGFKCKHNLIYWKNKPFYAFGLGSASYVGGLRFSRPRRLKEY 357

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           ++ VA  +E    +W      NG   +       +  A + LM+  R  +G+ +K++
Sbjct: 358 TNYVA-DLENGAANWC----GNGDVDL-------KDVATDILMLSFRTSKGLELKEF 402


>gi|33861867|ref|NP_893428.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|33640235|emb|CAE19770.1| Oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 408

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 182/349 (52%), Gaps = 20/349 (5%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
            YVH PFC ++C YCDF      + +   +      ++ +LT + + +  +     +S+I
Sbjct: 9   AYVHIPFCHRRCFYCDFAVIPLGNKIESLEGYGSKTVKEYLTYLNKEILSIKHKSPLSTI 68

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS++ P  I  +++   +N+ +    EIT+E +P+S   ++  G+ KAG+NR S
Sbjct: 69  YIGGGTPSILNPLQIKDLINLFKENYKIDYGAEITMEVDPASFNEDDLYGFIKAGINRFS 128

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQTMTQWEM 189
           LGVQS   Q L   GR H + +   +    +  +        S DLI  LP+    +W+ 
Sbjct: 129 LGVQSFNNQVLEQAGRRHCSKDVEKSCFWLKRAYNHGFIKSWSLDLIQNLPRSGFKEWQE 188

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+++L +   H+S+Y L+IE GT+F K+   G L LP ++ A     LT  I  A G  
Sbjct: 189 DLKQSLKFFPPHISIYDLSIENGTVFKKLVDLGKLSLPKDDDAFKNSELTNFILKASGYS 248

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN+S  G +S HN  YW+   +   G G+ S    G +     I K  + W   V 
Sbjct: 249 RYEISNYSIPGHQSRHNRVYWKGLGWWSFGQGSTSS-PWGENFTRPRISKDYKKW---VT 304

Query: 310 KNGHAVVEKEFLSSE---QQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           K     +E   ++ E   ++ DE +M+G+RL+EGI++  + +L  +N D
Sbjct: 305 KQCEIKLEHSLINQENIYKELDEKIMLGMRLKEGINI--YNLLNEQNWD 351


>gi|307699746|ref|ZP_07636801.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris FB024-16]
 gi|307615049|gb|EFN94263.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris FB024-16]
          Length = 478

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 152/312 (48%), Gaps = 39/312 (12%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH--------VRRYK--VGQENFIQSFL----------- 56
           S   YVH P+C+++C YCDFN++        V  Y   VG+E  + + L           
Sbjct: 2   SFSAYVHVPYCLRRCGYCDFNTYANLGLGPGVAGYADAVGREILLVARLFSGSFGSVHEA 61

Query: 57  -----------------TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
                            T+     ++ G R+I ++FFGGGTP+++ P+++  I   +   
Sbjct: 62  PAEMAPHATGATPTTRGTDPSETYEIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYALKDA 121

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           + V    EIT EANP +V+    +     G  R+S G+QS     LR L R H  +   A
Sbjct: 122 FGVCPGAEITTEANPDTVDAGYLEELAAGGFTRVSFGMQSAVSGVLRVLDRTHTQANLEA 181

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           A+  A+++    S DLIY  P ++M  W   L+ AL+  V H+S Y L+IE  T   +  
Sbjct: 182 AVRAAQSLGLECSVDLIYGTPGESMADWRESLEAALALGVSHVSCYALSIEPATALGREL 241

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
           + G +     +   + Y +   + SA GL  YEISN +  G E  HNL YWR  DY G G
Sbjct: 242 RRGRISPVDPDDQAEKYEIADRVLSAAGLQWYEISNWARPGHECRHNLAYWRNRDYYGFG 301

Query: 280 PGAHSRVKVGSH 291
           PGAHS ++ G H
Sbjct: 302 PGAHSHLR-GEH 312


>gi|154491766|ref|ZP_02031392.1| hypothetical protein PARMER_01382 [Parabacteroides merdae ATCC
           43184]
 gi|154088007|gb|EDN87052.1| hypothetical protein PARMER_01382 [Parabacteroides merdae ATCC
           43184]
          Length = 350

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +E +I + + EM+  ++  G   + +I+FGGGTPS ++  +   I +   + +  SS  E
Sbjct: 4   KEPYIDAAIREMELRQEYIGGEPLDTIYFGGGTPSQLQQADFERIFEAADRLFGTSSCTE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-N 166
           IT+EANP  +        R    NRIS+GVQS +E+ LRFL R HN  +A+ A+ L + N
Sbjct: 64  ITLEANPDDMTPEYVASLRNLPFNRISMGVQSFKEKDLRFLNRRHNREQALRAVGLCKEN 123

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
               +S DLIY LP QT+ +W+  L  A+   + H+S Y L  E+GT  YK+ + G +  
Sbjct: 124 GIQNISIDLIYGLPGQTLEEWQENLDDAIRLEIPHISAYHLIYEEGTALYKLMEAGKVTP 183

Query: 227 PSENVAVDLYN-LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
             E+++V L++ L   +T A  LH YEISN    G  S HN +YW    YIGIGP AHS 
Sbjct: 184 IEEDLSVTLFSTLINRLTEAGYLH-YEISNFGRPGYFSRHNSSYWTGTKYIGIGPSAHS- 241

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  R   +I   P  +L+ + K G   +E E L    + ++F++ GLR   GI   D
Sbjct: 242 -YDGESR-QWNISSLPR-YLQGI-KAGIPDIEIEELDINTKYNDFIITGLRTMWGIRTAD 297

Query: 346 WEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                G       E+      RQG + R +   L  +++G+ + D ++++L
Sbjct: 298 IRERFGEEKQTYLEQQAATYLRQGLLIR-ENDTLTLSKKGIFISDGIMSDL 347


>gi|319788978|ref|YP_004090293.1| oxygen-independent coproporphyrinogen III oxidase [Ruminococcus
           albus 7]
 gi|315450845|gb|ADU24407.1| oxygen-independent coproporphyrinogen III oxidase [Ruminococcus
           albus 7]
          Length = 372

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 26/328 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFG 77
           G+YVH PFC++KCPYC F S     +     ++++    +   +     R IS  +++FG
Sbjct: 3   GIYVHVPFCLRKCPYCSFYSKPYDAETASR-YVEAICRNIAAYQG----RGISADTLYFG 57

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++ + + +I++   K +++  N EIT+EANP SV+    +GYR AGVNRIS G+
Sbjct: 58  GGTPSLLDTKQVEMIVNECCKAFSLD-NAEITLEANPCSVDEEKLRGYRAAGVNRISFGI 116

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L FLGR H+  +A+ A+  A N  F  +S D++     +     +  +    +
Sbjct: 117 QSADDKRLGFLGRLHDYGKAVEAVENAVNAGFENISADIMLGAAGEDTESLKKTIDSICA 176

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL---VLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             V H+S Y L IE+GT F     D D    ++  +++  DLY         HG   YEI
Sbjct: 177 MPVRHISSYMLKIEEGTAF-----DNDKTKSLIADDDLMSDLYLTAVESFEKHGFRQYEI 231

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G ES HN  YW   DY+G G  AHS      +      E    + L+       
Sbjct: 232 SNFCMEGYESRHNNKYWTGEDYLGFGAAAHSFFDGVRYFCPPDTEAFINAPLQP-----R 286

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGI 341
            V E+    S  + +E++++GLRL +GI
Sbjct: 287 EVTEQ----SVDRGEEYILLGLRLCKGI 310


>gi|256372069|ref|YP_003109893.1| Coproporphyrinogen dehydrogenase [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256008653|gb|ACU54220.1| Coproporphyrinogen dehydrogenase [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 363

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 45/381 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPR-SISSIFFG 77
           +YVH PFC ++C YCDF+  +R       +F+     E+  +    L   R   +S+F G
Sbjct: 15  LYVHVPFCRRRCAYCDFSVAIREP---DRDFVDDVERELANRVEEGLVDERFCATSVFLG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS ++   +A ++  +A+     S  E+TIE NP  + V     +R+AGV RIS+G+
Sbjct: 72  GGTPSYLDDGAVARLIR-LARP---VSGAEVTIEVNPEDLSVGRVARWREAGVGRISVGL 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRAL 195
           QSL+++ L  LGR HNA++A+  I      F   R+S DLI+  P +    W   L   +
Sbjct: 128 QSLDDRVLAHLGRGHNAADALGRIRAVVEAFADLRVSVDLIFGDPLEDDASWRRTLAGVV 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              + H+S Y LT+E GT F  +  D       +      Y +  ++  A G   YEISN
Sbjct: 188 DLGIGHVSTYALTVEPGTRFRSLRVD-------DETQARRYEVADAVLGAAGYAWYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            +  G ES HN  YW  G Y+G+GP AHS R  V S  VA      P  W + VR     
Sbjct: 241 WARPGQESRHNQTYWGGGAYLGLGPSAHSFRDPVRSWNVA----SWPR-WRERVRAGLVP 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGI---SVKDWEMLAGRNLDIECERNLQRQGFIERV 371
               E LSS  +  E   + LR R+GI   +V  W                    F E  
Sbjct: 296 TEGLEVLSSSARVLEARYLALRQRDGIDEEAVPAWAA-----------------AFFEEG 338

Query: 372 QFSRLRCTQRGMTMLDSVIAN 392
              R R T RG  + D ++A 
Sbjct: 339 APGRRRLTVRGRLLADEIVAR 359


>gi|330444424|ref|YP_004377410.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pecorum E58]
 gi|328807534|gb|AEB41707.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlamydophila pecorum E58]
          Length = 373

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 174/335 (51%), Gaps = 14/335 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQW-MRQLTGPRSIS 72
           G   L +Y+H PFC KKC YC F  +   YK    E + Q+ + E +  +  L     I 
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSF--YTIPYKSETVELYSQAIILEGEHKLAPLRDSHYIE 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTPSL+ P  +  IL  +A N       EIT+EANP ++        R   +NR
Sbjct: 61  TVFFGGGTPSLLSPSQLNNILSKLAPNAK-----EITLEANPENITKEYVDALRHTPINR 115

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ+ ++  L+ LGR H++S AI A+ L  +  F  +S DL+Y LP QT+  +  +L
Sbjct: 116 ISLGVQTFDDSQLQLLGRTHSSSHAIEALSLLTSWGFSNLSIDLMYGLPTQTLEGFLSDL 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            RAL   + HLSLY LTI+  T FYK           E     + +L + + ++ GL  Y
Sbjct: 176 NRALKLPLTHLSLYNLTIDPHTSFYKHRNALAPTFAKEESLAAMSSLAEELCTSRGLLRY 235

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EI++++     S HNL YW    ++G+G  A S+   G     +S   H   +L+ V ++
Sbjct: 236 EIASYARTSYPSKHNLYYWTDRPFLGLGVSA-SQYLHGVRSKNLSRISH---YLRAVFRH 291

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                  E L  +++  E L + LRL EG   KD+
Sbjct: 292 LPPEEFSETLPEKERLKEALALRLRLTEGALWKDF 326


>gi|78185113|ref|YP_377548.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CC9902]
 gi|78169407|gb|ABB26504.1| coproporphyrinogen III oxidase, anaerobic [Synechococcus sp.
           CC9902]
          Length = 400

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 191/391 (48%), Gaps = 39/391 (9%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISS 73
            Y+H PFC ++C YCDF         R  +      IQS+L  +  +      GP  +S+
Sbjct: 10  AYLHIPFCHRRCYYCDFAVVPLGDRARGGQGPGSASIQSYLQVLHHEIASAPKGP-PLST 68

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL+ P  IA +L  +   + +    EIT+E +P+S + +  +     GVNRI
Sbjct: 69  VYFGGGTPSLLSPAQIAELLGQLRLRYGLQEGAEITLEMDPASFDQHQLKEVLAFGVNRI 128

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-----FPRMSFDLIYALPKQTMTQWE 188
           SLG QS ++  L  LGR H + + + A     +          S DLI +LP QT+  W 
Sbjct: 129 SLGGQSFDDGVLEQLGRRHRSKDLLEACEWMDDAHRSGELSSWSLDLIQSLPGQTLEDWC 188

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +A++    H+S+Y L++E GT+F+     GDL LP ++V+ DL  LT S  S  G 
Sbjct: 189 HQLNQAIACGSPHISIYDLSVEPGTVFHHRLHHGDLTLPDDDVSCDLMALTSSRLSEAGF 248

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----RVKVGSHRVAISIEKHPES 303
             YEISNH+  G  S HN  YW    + G G GA S     RV     R A S      +
Sbjct: 249 RRYEISNHARPGHASRHNRVYWSGSGWWGFGMGATSAPWGERVARPRTREAYS------A 302

Query: 304 WLKMVR--KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER- 360
           WL   R  + G  V            DE L++GLR  EG+ +  +++ + +   +E ER 
Sbjct: 303 WLNDPREPEGGFGV----------PLDEQLLVGLRREEGMDLTAFDLSSAQITSLE-ERW 351

Query: 361 -NLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               ++G ++R           GM + + V+
Sbjct: 352 APFLKEGLMQRRAGRWCLKDPEGMALSNRVL 382


>gi|167750752|ref|ZP_02422879.1| hypothetical protein EUBSIR_01730 [Eubacterium siraeum DSM 15702]
 gi|167656187|gb|EDS00317.1| hypothetical protein EUBSIR_01730 [Eubacterium siraeum DSM 15702]
          Length = 364

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 171/349 (48%), Gaps = 42/349 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNS------HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G+Y+H PFC+ KCPYCDF S         RYK      ++ +L++ + +R         +
Sbjct: 4   GLYIHIPFCLSKCPYCDFYSVAFDSDTANRYKDAVIRNLRCYLSQDENLR-------FDT 56

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTP L+  + I  I+D I     ++S+ EIT+EANP   + N     +   VNRI
Sbjct: 57  VYFGGGTPILLW-REICDIMDEIQP--YIASDAEITVEANPCCTDENALCSLKTHNVNRI 113

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+QS  +  L+ LGR HN+     A+ +A +  F  +S D++  +P QT       + 
Sbjct: 114 SFGLQSGNDNELKALGRKHNSKVGADAVKMAYKAGFYNISGDIMLGIPLQTSDSLIETIS 173

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              S  + H+S Y L IE  T F K H    L+LP E+   ++Y  T    S  G   YE
Sbjct: 174 YMTSLPLSHISAYMLKIEPDTPFSKRH----LILPDEDGYANIYLETVERLSDKGFRQYE 229

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----RVKVGSH-RVAISIEKHPESWLK 306
           ISN +  GAES HNL YWR  +Y+GIGP AHS     R  VG   R  I  E  P     
Sbjct: 230 ISNFAKTGAESRHNLRYWRCEEYLGIGPAAHSYFNGERFAVGRDLRAFIESEVQPA---- 285

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                   + E+E    E+ A    M+ LRL EG+     E   G   D
Sbjct: 286 -------IITERECGDYEEWA----MLKLRLSEGLDFDTAEKRFGVTKD 323


>gi|194476566|ref|YP_002048745.1| Oxygen-independent coproporphyrinogen III oxidase [Paulinella
           chromatophora]
 gi|171191573|gb|ACB42535.1| Oxygen-independent coproporphyrinogen III oxidase [Paulinella
           chromatophora]
          Length = 424

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 175/332 (52%), Gaps = 16/332 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEM--QWMRQLTGPRSISSIFF 76
            Y+H PFC ++C YCDF       K      N IQ +L  +  +    + GP  +S+++ 
Sbjct: 22  AYLHIPFCHRRCYYCDFAVIPLGDKADGAHSNSIQGYLELLHHEISSSIKGP-PLSTVYI 80

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + +  +L+ +  ++  +   E+T+E +PS+     F+GY  AG+NR+SLG
Sbjct: 81  GGGTPSMLTSKQLEQLLEALRCHFGFAPEAELTLEMDPSTFNRRRFEGYLAAGINRMSLG 140

Query: 137 VQSLEEQSLRFLGRNH-----NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           VQS E+ +L  LGR H       S +  A     N     + DLI  LP QT+ QW+ +L
Sbjct: 141 VQSFEDITLTNLGRRHRWRQLQESLSWLAAAFEENGLISWNLDLIQGLPSQTLLQWKSQL 200

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++A+++   HLS+Y L+IE GT+F   +  G L LP  +   DL  L+ +  SA G   Y
Sbjct: 201 EKAINFNPPHLSIYTLSIEPGTVFAWQYSQGKLALPESDETADLMELSYNFLSAVGYSQY 260

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G  S HN  YW    + G G GA S      +   I+  +  E++ + +  +
Sbjct: 261 EISNFALPGHASRHNRAYWSGAGWWGFGLGATS----APYGEIIARPRKRETYTRWLIAD 316

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              +   E   S    DE +++G+R REG+++
Sbjct: 317 --KLKRLEIPISGMSFDERIIVGMRRREGVAL 346


>gi|220915384|ref|YP_002490688.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219953238|gb|ACL63622.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 379

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 163/333 (48%), Gaps = 6/333 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVH+P+C  +CPYCDF     R   G   + ++   E+          S+ S++
Sbjct: 2   ARPFGVYVHYPYCTHRCPYCDFAVTTER-PPGAGRYARAVRAELGLRAPAFEGLSLRSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +   +  +L  +   + +    E+T+E NP S +    + +R AGVNRIS+
Sbjct: 61  LGGGTPSLWDADELRDVLAAVRDRFGLPGGAEVTLEVNPESSDPARLEAWRAAGVNRISV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS +   L  LGR H    A  AI  A      +S DLIY   + ++     + +RA+
Sbjct: 121 GAQSFDPGVLAKLGRRHGPERAEQAIREAAAAIGNVSVDLIYGARRSSVETARRDAERAV 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                H+S Y LT++   +       +M ++G L LPS+  A+      ++     GL  
Sbjct: 181 EAGAVHVSAYALTLDPDVMAEEVPLARMRREGRLPLPSDEDALAQAAALRAALRRLGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES+HN  YWR+  Y+G+G GA+   +  +  V     +   +WL  V  
Sbjct: 241 YEISNFARPGRESVHNGLYWRHESYLGLGAGAYGCRRGDAGSVRYGNLRDAGAWLATVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 E++ + +    +E LM+ LR R+G  +
Sbjct: 301 GRLPTAEEDRIDARADRNERLMLALRTRDGAPL 333


>gi|160932288|ref|ZP_02079679.1| hypothetical protein CLOLEP_01123 [Clostridium leptum DSM 753]
 gi|156868890|gb|EDO62262.1| hypothetical protein CLOLEP_01123 [Clostridium leptum DSM 753]
          Length = 378

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 184/383 (48%), Gaps = 19/383 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIF 75
           + +G+Y+H PFC  KCPYCDF S     +   +++    ++E+  W  +   PR   +++
Sbjct: 7   DPIGLYLHIPFCDGKCPYCDFYSLPAGSRT-MDDYCGRLISELFLWGEKC--PRFADTLY 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+    ++ ++    K ++     EIT+E NP S    +F   R AG NRIS+
Sbjct: 64  FGGGTPSLLGADRLSRLITAAQKAFSFVPGAEITVEMNPCSAGGFDFPALRMAGANRISI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L+FLGR H A +A   A    R  F  +S DL+  L  QT       +   
Sbjct: 124 GLQSALDAELQFLGRRHTARQAWDTAAAAQRAGFRSVSLDLMLGLEGQTTDSVRKSVAFC 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V H+S Y L IE GT F++  +     LP ++ A DLY          GL  YEIS
Sbjct: 184 RDAGVTHVSAYLLKIEPGTRFFQQRE--AFHLPGDDQASDLYLAACQALEEAGLFQYEIS 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y+GIGP AHS    G  R        P+S     +   + 
Sbjct: 242 NFSVPGKESRHNLKYWNGDEYLGIGPSAHS--FFGGRRFYT-----PKSLSAFFQAPQYL 294

Query: 315 VVEK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIER 370
             +  E        +E+ M+ LRL EG++   ++      +  +  +N    Q  G +  
Sbjct: 295 PEDPDESAIPPGGPEEYTMLRLRLSEGLTEAGYQQRFQTPIPEKYRKNALRFQAPG-LTL 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           V    +R T+RG  + + +I  +
Sbjct: 354 VDSQGIRLTRRGFLVSNQLIGEI 376


>gi|67921337|ref|ZP_00514856.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Crocosphaera watsonii WH 8501]
 gi|67857454|gb|EAM52694.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Crocosphaera watsonii WH 8501]
          Length = 417

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 172/336 (51%), Gaps = 16/336 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC ++C YCDF   V   K           ++Q    E++     T  R + 
Sbjct: 7   VSAYLHIPFCRRRCYYCDFPISVLGDKTNTNTSGSISEYVQFLCEEIKITP--TYNRPLK 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTPSL+ P+ +  IL  + + + + ++ EI++E +P +  +     Y+  GVNR
Sbjct: 65  TVFFGGGTPSLLPPRYLDKILATLDQQFGICADAEISMEIDPGTFSLEQLSDYKTLGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEME 190
            SLG+QS +++ L   GR H   +   +I      NI    S DLI  LP QT+  W+  
Sbjct: 125 FSLGIQSFDDKLLEKSGRFHRYKDIEQSIDFIYKTNII-NFSLDLISGLPYQTLEDWKSS 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+     H+S Y L +E  T F K +K G   LP ++  + +Y + Q I +  G   
Sbjct: 184 LEKAIKIQPSHISCYDLVLEPVTAFGKQYKPGKFPLPDDDNTMLMYKMGQRILTEAGYEH 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G + LHNL YW    Y  +G GA S              K    W++ +++
Sbjct: 244 YEISNYAQQGYQCLHNLVYWENKPYYALGMGAASYSN-NQRFTRPRTRKDYYQWIEKLKQ 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           + ++ ++ ++L +     E  M+GLRL++G+   DW
Sbjct: 303 SDYS-LDCDYLDTIDIILETFMLGLRLKKGV---DW 334


>gi|29347578|ref|NP_811081.1| coproporphyrinogen III oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572038|ref|ZP_04849442.1| coproporphyrinogen III oxidase [Bacteroides sp. 1_1_6]
 gi|29339479|gb|AAO77275.1| coproporphyrinogen III oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251838218|gb|EES66305.1| coproporphyrinogen III oxidase [Bacteroides sp. 1_1_6]
          Length = 376

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     + +++ +   E++  ++      + +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTR--SELKTHYVHTLCRELEMRKEYLKGEPVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E  +   I + I +N+ +    EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEEADFKHIFETIRENYGMEHCREITLEANPDDLSQEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R H++  A+ A+   R   F  +S DLIY LP +T  +W  +L++A+   
Sbjct: 121 FDDTTLQLLKRRHSSQTAVEAVRRCREAGFQNISIDLIYGLPGETKERWVNDLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT E+ T  Y M K   +    E+ ++  + L        G   YEISN   
Sbjct: 181 VEHISAYHLTYEEDTPIYNMLKQHQIEEVDEDSSLQFFTLLIEHLQNAGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN +YWR   Y+G GP AHS           SI+     ++K +  N     E 
Sbjct: 241 PDKYSRHNTSYWRGIPYLGCGPSAHSFNGTTREWNVSSIDL----YIKGIEGNQRD-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L    + +EF++  +R   G  ++  +   G  L   C +        G +E +    
Sbjct: 296 ENLDQTTRYNEFIITTIRTVWGTPIEKLKQEFGNELWEYCRKMSAPYLENGKLE-IHEGA 354

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G+ + DS++++L
Sbjct: 355 LRLTREGIFISDSIMSDL 372


>gi|319892641|ref|YP_004149516.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent, in heat shock gene cluster
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162337|gb|ADV05880.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent, in heat shock gene cluster
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323464321|gb|ADX76474.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           pseudintermedius ED99]
          Length = 373

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 172/324 (53%), Gaps = 14/324 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            Y+H PFCVK C YCDFN + ++   V  + ++   + EM+  +       + ++F GGG
Sbjct: 6   AYIHIPFCVKICTYCDFNKYFIQNQPV--DLYLACLVEEMKQSK----ASQLETLFVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   + +    E T EANP  +        ++ GVNR+SLGVQ+
Sbjct: 60  TPTALSESQLEYLLQAIQDQFDIKG--EYTFEANPDELTEEKVALLKRYGVNRLSLGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ LGR+H+ ++   AI  AR      +S DL+Y LP Q+M Q++  L+ AL   
Sbjct: 118 FDDTLLQTLGRSHHKADIYQAIDNARRQGISSISLDLMYHLPGQSMQQFQESLEEALRLD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DHLS Y L +E  T FY  ++ G L +P+E+V  ++Y    +      L  YEISN + 
Sbjct: 178 IDHLSSYGLILEPQTQFYNQYRKGKLKMPNEDVGAEMYQYLMNRMKNSPLQQYEISNFAK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HN  YW+   Y G G GA   +  G     ++   H   ++K ++++    + +
Sbjct: 238 KGHESIHNQVYWKNESYYGFGAGASGYIG-GVRYTNVNPVNH---YIKKIQQHEFPRLTE 293

Query: 319 EFLSSEQQADEFLMMGLRLREGIS 342
              + ++Q +E + +GLR+  G+ 
Sbjct: 294 TTPTVKEQIEEEMFLGLRMNTGVD 317


>gi|288800059|ref|ZP_06405518.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333307|gb|EFC71786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 299 str. F0039]
          Length = 379

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 199/384 (51%), Gaps = 20/384 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--------- 70
           G+Y+H PFC  KC YC F S V   ++ Q+ +I++   E+   +Q               
Sbjct: 3   GLYLHVPFCSSKCSYCAFYS-VTNNQLKQD-YIEAICKELYLRKQFFKDIHFKNNQFKPL 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +++++FGGGTPS ++      I + I   +  +S  E+TIE NP  + ++ +    K   
Sbjct: 61  VNTVYFGGGTPSCLDEYAFEKIFNAIYDCFG-NSFEEVTIECNPDDITLS-YAKILKKYA 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRISLG+Q+     L+ + R HNA EAI A+ + + +    +S DLI+  PK+T+T W  
Sbjct: 119 NRISLGIQTFNNDQLKLINRRHNAEEAIRAVDIIKEVGISNISIDLIFGFPKETLTDWLF 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++ +A+   V H+S Y L  E+GT  Y + K   +   SE ++V++Y++     S  GL 
Sbjct: 179 DIDQAIKLNVQHVSAYSLMFEEGTKLYHLLKKKKIEQISEELSVEMYDVLIDKLSEAGLA 238

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G ES HN +YW    Y+G+GP AHS   +       ++ ++ +S  K + 
Sbjct: 239 QYEISNFAKPGFESRHNSSYWNETPYLGVGPSAHSYNLLTRSWNVSNVSQYIKSISKDIL 298

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  E+E +    + ++ +   LR ++GI +   +    R + +E      ++G I 
Sbjct: 299 P-----FEEELIDDITRYNDLVTTALRTKKGILLNSLQGDFSRYI-LEQSSGFIKEGMIM 352

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           +   +RL  T++G  + D+++A L
Sbjct: 353 KTTDNRLVLTRKGYYISDAIMAEL 376


>gi|325955659|ref|YP_004239319.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
 gi|323438277|gb|ADX68741.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
          Length = 374

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 175/337 (51%), Gaps = 11/337 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC ++C YCDF+      KV +   I + + E++ +R+ T    I +I+FGGG
Sbjct: 3   GLYFHIPFCKQRCTYCDFHFTTNLSKVNE--MIDAIIQEVE-LRKKTIQSPIETIYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS+++   ++ +   + K   +SS  E+T+EANP  +     +  R   +NR+S+GVQS
Sbjct: 60  TPSILDNALLSKLFTYLEKKIDLSSLQEVTLEANPDDLTREKLRYLRSTPINRLSIGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L F+ R H A EA  +I +A++  F  ++ DLIY  P  T  QW   L +A+   
Sbjct: 120 FFDNDLTFMHRAHKADEAENSIKMAQDFGFDNLTIDLIYGTPTTTDQQWTKNLNKAVDLQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT+E+ T+     K G      E      + + Q   +      YEISN   
Sbjct: 180 IPHISSYALTVEEKTILNHAIKSGKASDIDEEQQYRQFCILQEFLTQRNYIQYEISNFGK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            G  + HN +YW+Y  Y G GP AHS   +     +A     + + ++K + + G    E
Sbjct: 240 EGFFAKHNTSYWQYKPYYGFGPSAHSYNGRCRQWNIA-----NNQLYIKTIAQ-GKLPCE 293

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            E LS   + +E LM+GLR   GI +++ + L  R++
Sbjct: 294 TENLSEIDRYNEKLMIGLRTMWGIEIREIKNLFARDI 330


>gi|306818046|ref|ZP_07451777.1| coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC 35239]
 gi|304649010|gb|EFM46304.1| coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC 35239]
          Length = 514

 Score =  179 bits (454), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 152/312 (48%), Gaps = 39/312 (12%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH--------VRRYK--VGQENFIQSFL----------- 56
           S   YVH P+C+++C YCDFN++        V  Y   VG+E  + + L           
Sbjct: 25  SFSAYVHVPYCLRRCGYCDFNTYANLGLGPGVAGYADAVGREILLVARLFSGSFGSVHEA 84

Query: 57  -----------------TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
                            T+     ++ G R+I ++FFGGGTP+++ P+++  I   +   
Sbjct: 85  PAGMAPHAAGATPTTRGTDPSETYEIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYALKDA 144

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           + V    E+T EANP +V+    +     G  R+S G+QS     LR L R H  +   A
Sbjct: 145 FGVCPGAEVTTEANPDTVDAGYLEELAAGGFTRVSFGMQSAVSGVLRVLDRTHTQANLEA 204

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           A+  A+++    S DLIY  P ++M  W   L+ AL+  V H+S Y L+IE  T   +  
Sbjct: 205 AVRAAQSLGLECSVDLIYGTPGESMADWRESLEAALALGVSHVSCYALSIEPATALGREL 264

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
           + G +     +   + Y +   + SA GL  YEISN +  G E  HNL YWR  DY G G
Sbjct: 265 RRGRISPVDPDDQAEKYEIADRVLSAAGLQWYEISNWARPGHECRHNLAYWRNRDYYGFG 324

Query: 280 PGAHSRVKVGSH 291
           PGAHS ++ G H
Sbjct: 325 PGAHSHLR-GEH 335


>gi|304437686|ref|ZP_07397638.1| possible coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304369319|gb|EFM22992.1| possible coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 392

 Score =  179 bits (453), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 15/354 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG 67
            ++ G      G+YVH P+CVKKC YCDF S     +  + E++  +   E+  +R++  
Sbjct: 3   TDVRGAEGEPWGIYVHIPYCVKKCAYCDFVSVPSAPRAAEMEDYAAALTAEL--LREVPP 60

Query: 68  PRS----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            R+     ++I+ GGGTP+ +    +  +L+ +       + VE T+EANP +V+     
Sbjct: 61  LRARRGAAATIYVGGGTPTALPAPLLMGVLETL--RTAAGTPVEWTVEANPGTVDTAYLG 118

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R AG NR+SLGVQS ++  L  +GR H A+EA  A H AR   F  +S DL+Y LP Q
Sbjct: 119 ALRAAGANRLSLGVQSFDDTLLYGIGRIHTAAEAAQAFHAARAAGFENISIDLMYGLPGQ 178

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+      +  A + A +HLS+Y LT+E+GT F  M   G L LP+E+ A ++Y+   + 
Sbjct: 179 TLDHLRRSVAAAAALAPEHLSVYGLTVEEGTPFAAMQAAGRLDLPTEDAAEEMYDFLMAE 238

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             A G   YEI+N +  G ES HN  YW    Y+G+G  AH  V     R A   E    
Sbjct: 239 LPARGYARYEIANFAQPGFESRHNRGYWHMTPYLGLGAAAHGYVD--GERWA--NEADIP 294

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQA-DEFLMMGLRLREGISVKDWEMLAGRNLD 355
           ++++ +R        ++   + ++A +E+  + LR   GI   D+    GR+L+
Sbjct: 295 AYIRAMRAGTSVRTPEDGARTRERAMEEYAFLALRTTAGIDAADFHRRWGRDLE 348


>gi|116511983|ref|YP_809199.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107637|gb|ABJ72777.1| coproporphyrinogen III oxidase, anaerobic [Lactococcus lactis
           subsp. cremoris SK11]
          Length = 379

 Score =  179 bits (453), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 172/337 (51%), Gaps = 18/337 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSI 71
           Q  NS   Y H PFC   C YCDF    +    GQ  + +I++ + E Q ++     + +
Sbjct: 3   QKPNS--AYFHIPFCSHICYYCDF---AKVLMTGQPVDAYIEAIIEEFQSLK----IKKL 53

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTPS++  Q +  +L  IA    +    E T+EANP  +  +  +    + VN
Sbjct: 54  KTVYIGGGTPSVLSAQQLERLLTAIADQLDLDFLEEFTVEANPGDLSDDVIKVLAHSAVN 113

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEME 190
           RISLGVQ+     L+ +GR HN ++   +I  L    F  ++ DLIYALP QTM   + +
Sbjct: 114 RISLGVQTFNNTLLKKIGRTHNEAQVYDSIERLKMAGFENITIDLIYALPGQTMEMVKSD 173

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + L+  + H++LY L +E  T+F    + G L LPSE+   D+Y     I    G   
Sbjct: 174 VDKFLALDLPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILEQQGYQH 233

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN    G ES HN+ YW   +Y GIG GA   +    ++    +      +LK    
Sbjct: 234 YEVSNFGRPGFESKHNITYWDNEEYYGIGAGASGYLSGVRYKNYGPV----HHYLKAAAN 289

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           +    V +E LS + Q +E + +GLR + G+ V+ +E
Sbjct: 290 DKR--VNEEVLSKKSQIEEEMFLGLRKKSGVLVEKFE 324


>gi|269976834|ref|ZP_06183809.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris 28-1]
 gi|269935031|gb|EEZ91590.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris 28-1]
          Length = 514

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 152/312 (48%), Gaps = 39/312 (12%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH--------VRRYK--VGQEN------FIQSFL----- 56
           S   YVH P+C+++C YCDFN++        V  Y   VG+E       F  SF      
Sbjct: 25  SFSAYVHVPYCLRRCGYCDFNTYANLGLGPGVAGYADAVGREISLVARLFSGSFGSVHEA 84

Query: 57  -----------------TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
                            T+     ++ G R+I ++FFGGGTP+++ P+++  I   +   
Sbjct: 85  PAEMAPPAAGATPTTRGTDPSETSEIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYALKDA 144

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           + V    EIT EANP +V+    +     G  R+S G+QS     LR L R H  +   A
Sbjct: 145 FGVCPGAEITTEANPDTVDAGYLEELAVGGFTRVSFGMQSAVSGVLRVLDRTHTQANLEA 204

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           A+  A+++    S DLIY  P ++M  W   L+ AL+  V H+S Y L+IE  T   +  
Sbjct: 205 AVRAAQSLGLECSVDLIYGTPGESMADWRESLEAALALGVSHVSCYALSIEPATALGREL 264

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
           + G +     +   + Y +   + SA GL  YEISN +  G E  HNL YWR  DY G G
Sbjct: 265 RRGRISPVDPDDQAEKYEIADRVLSAAGLQWYEISNWARPGHECRHNLAYWRNRDYYGFG 324

Query: 280 PGAHSRVKVGSH 291
           PGAHS ++ G H
Sbjct: 325 PGAHSHLR-GEH 335


>gi|229817605|ref|ZP_04447887.1| hypothetical protein BIFANG_02873 [Bifidobacterium angulatum DSM
           20098]
 gi|229785394|gb|EEP21508.1| hypothetical protein BIFANG_02873 [Bifidobacterium angulatum DSM
           20098]
          Length = 372

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 178/361 (49%), Gaps = 26/361 (7%)

Query: 50  NFIQSFLTEMQ----WMRQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
           N+    + EM+    W R+  +  P + S++FFGGGTP+++   ++  +LD I + W ++
Sbjct: 9   NYANMVVREMRLVRDWQREHGIDEP-AASTVFFGGGTPTVLRAADLVKMLDAIRELWGIA 67

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
            + EIT EANP +V+ +  +     G NRIS G+QS     L+ L R H  S   A +  
Sbjct: 68  DDAEITTEANPDTVDADYVKELADGGFNRISFGMQSAVPSVLKTLDRTHTPSNVAAGVEA 127

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           A     R S DLIY  P +++  W   +  A+   V+H+S Y LTI   T   +    G 
Sbjct: 128 ANAAGMRSSVDLIYGAPGESLDDWRTSVSTAIDLGVNHISAYALTIAPHTKMGRRIAAGT 187

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           L  P ++   + Y +   + SA GL  YEISN +  G ES HNL YWR  D+ G+GPGAH
Sbjct: 188 LPTPDDDDEANKYEIADDLLSAAGLEWYEISNWARPGYESRHNLGYWRNVDWAGLGPGAH 247

Query: 284 SR----VKVGSHRVAISIEK----------HPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           S     +   S     +             HP+ W + +          E +S E+  +E
Sbjct: 248 SHYNRCLADSSGETGETTSSPLGLRSWDIAHPKLWGQSIIDGKVPWDGSERISHEEHLEE 307

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +M+GLRLR G+ +     L G  +D+   R ++ +G I  +   R+  T+ G  + D+V
Sbjct: 308 TIMLGLRLRGGLDLA----LLGDTVDMTRIRPMENEGLIT-IHGGRVVPTRTGRLLNDTV 362

Query: 390 I 390
           I
Sbjct: 363 I 363


>gi|315657198|ref|ZP_07910082.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492301|gb|EFU81908.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 471

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 158/347 (45%), Gaps = 46/347 (13%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWM-------------- 62
           +L  YVH P+C+++C YCDFN++       G   +  + L E+                 
Sbjct: 6   TLSAYVHVPYCLRRCGYCDFNTYSNLSLGPGVGGYAAALLREIGLYAPDCSVSVAVCPDG 65

Query: 63  -------------------------RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIA 97
                                    RQ +  R+++S+FFGGGTP+++   ++  +L G++
Sbjct: 66  GHKGGGHEGGAGGAGRQDGSHKGGGRQDS--RALTSVFFGGGTPTVLPATDLVRVLRGLS 123

Query: 98  KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           + + +    EIT EANP +V     +     G  R+S G+QS     L  L R H     
Sbjct: 124 ETFGLVPGAEITTEANPDTVTPQYLEALAAGGFTRVSFGMQSAVPAVLATLNRTHQQKHL 183

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           +A +  AR     +S DLIY  P +++  W   L  AL    DH+S Y L IE GT   +
Sbjct: 184 VAGVRAARAQGLEVSVDLIYGTPGESLADWRTSLDAALELGADHVSCYALVIEPGTALGR 243

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
               GD+     +   D Y L     SA GL  YEISN +  G E  HNL YWR  D+ G
Sbjct: 244 ALAQGDIPPVDPDDQADKYELADETLSAAGLQWYEISNWARPGHECRHNLAYWRDQDWYG 303

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
            GPGAHS   +GS R      +HP  W++ ++     V  +E ++ +
Sbjct: 304 FGPGAHSH--LGSTR--FWNLRHPAKWMQSLQAGHRPVDGQEIVTGD 346


>gi|282878929|ref|ZP_06287693.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccalis ATCC 35310]
 gi|281298928|gb|EFA91333.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccalis ATCC 35310]
          Length = 386

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 203/393 (51%), Gaps = 31/393 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--------- 70
           G+Y+H PFC  +C YC F S      V Q+ ++ +   EMQ  R                
Sbjct: 3   GLYIHIPFCASRCIYCGFYS-TTHLDVRQQ-YVDALCREMQLRRHYLPTTDDTSAVAQPL 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIA------KNWTVSSNVEITIEANPSSVEVNNFQG 124
           IS+I+ GGGTPS + P  +  I   I        +  + ++ E+T+E NP  +  +  Q 
Sbjct: 61  ISTIYLGGGTPSQLTPAQLQQIFCTIVTVFFHGDDTLMRTHCEVTMECNPDDITPSFVQF 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            + + VNR+S+GVQS   + L+FL R H+A +    +   R+I    +S DL++  P QT
Sbjct: 121 LQHSPVNRVSMGVQSFSNERLKFLHRRHHAQDISPVVQQLRSIGIDNISVDLMFGFPNQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +W++++Q+AL+  V+H+S Y L  E+GT  Y++ ++  +    + +++ +Y       
Sbjct: 181 LDEWKLDIQKALALRVEHISAYSLMYEEGTPLYQLLRNNKVKEIDDELSLTMYQTLVDEL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A G   YEISN +  G  S HN +YW    Y+GIG  AHS   + S +  +S  K   S
Sbjct: 241 KASGYEHYEISNFAKPGKRSQHNSSYWHAIPYLGIGASAHS-YDIQSRQWNVSNIKEYIS 299

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECER 360
            +    + G    E+E+L  + + ++ +   LR  EGI++    ML+ ++   L  + E+
Sbjct: 300 SI----EQGEIPFEREWLDDDTRYNDLITTALRTSEGINLS---MLSPKHKTYLLQQAEK 352

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +  Q  +E ++   +R T +G+ + D+++A+L
Sbjct: 353 QIA-QNLLE-IRGDSIRLTAQGLYVSDAIMADL 383


>gi|328955423|ref|YP_004372756.1| oxygen-independent coproporphyrinogen III oxidase [Coriobacterium
           glomerans PW2]
 gi|328455747|gb|AEB06941.1| oxygen-independent coproporphyrinogen III oxidase [Coriobacterium
           glomerans PW2]
          Length = 396

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 162/333 (48%), Gaps = 15/333 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +YVH PFC  +CPYCDF S     R        ++      +  +  +     +   + G
Sbjct: 6   LYVHMPFCRSRCPYCDFFSCALGARGSDAQAGAYLDMVCARIDELGSIGVLDHLRCGYIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P     +   +A+       VEIT EANP S   +      +AG  RISLGV
Sbjct: 66  GGTPSLFGPA----LAGAVARIRRWCEPVEITCEANPESCTASFCSAIARAGATRISLGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL ++ L  +GR H    A+ AI +AR     +S DL+  LP QT   WE  L   +  
Sbjct: 122 QSLIDEELAVMGRIHTRERALCAIEIARATGMSVSCDLMCGLPGQTADSWERTLLDVIEA 181

Query: 198 AVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           A DH+S+Y L+IE GT F  +  +D  LV P E++  DL    +++    G   YE++++
Sbjct: 182 APDHISVYPLSIEPGTPFERRCARDAHLV-PDEDLQADLMIAARAMLREAGFEPYEVASY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS---HRVAI-SIEKHPESW-LKMVRKN 311
           +  G   LHN+ YW    Y  IGP A +   V     +R A   +E  P +  +++ +++
Sbjct: 241 ARSGHACLHNIAYWTAKSYAAIGPSAAAMFSVDEFTRYREAFPGVEPGPRAARVRLRQRD 300

Query: 312 GHA-VVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 E EFL   +   E LM+G+R+  GI  
Sbjct: 301 ARGRSFEAEFLDERETVAEDLMLGMRMSAGIGA 333


>gi|260592159|ref|ZP_05857617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella veroralis F0319]
 gi|260535793|gb|EEX18410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella veroralis F0319]
          Length = 400

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 178/353 (50%), Gaps = 35/353 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV--RRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSI 74
           G+YVH PFC  +C YC F S +  R+   G   +E ++ +   EMQ +R       I SI
Sbjct: 3   GLYVHVPFCASRCIYCGFYSTIPTRQKDNGLTIEEQYVNALCNEMQ-LRANELDEPIRSI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSN-----VEITIEANPSSVEVNNFQGYRKAG 129
           + GGGTPS +  +++  I   I K + ++ N     +EIT+E NP  V     +  +K  
Sbjct: 62  YLGGGTPSQLTYKSLQQIFSTIKKAFHITWNKNNSPLEITMECNPDDVTDTFVRDLQKLP 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           +NRIS+GVQ+  ++ LRFL R H A E   AI   R I    +S DL++  P +TM +W+
Sbjct: 122 INRISMGVQTFSDERLRFLHRRHTADEVELAIKRLRKIGIHNISIDLMFGFPNETMNEWK 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++ RA+   V+HLS Y L  E+GT  Y++ K+G +    + +   +Y+L  +  +  G 
Sbjct: 182 SDIDRAIQLNVEHLSAYSLMYEEGTPLYQLLKNGKVKEMDDELYRQMYDLLINGLTQAGY 241

Query: 249 HAYEISNHSFLGAE------------------SLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
             YEISN + L  +                  SLHN +YW    YIG+G  AHS      
Sbjct: 242 EHYEISNFAKLKPQRSNFKGQTSKGRDQSPFRSLHNSSYWHNVPYIGLGAAAHSYNNSKR 301

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 I    ++++  ++ N     E+EF+  +   ++ +M  LR REG+ +
Sbjct: 302 SWNVADI----KAYISALKDNKRP-YEEEFIDEDTHYNDMIMTALRTREGLQL 349


>gi|326798467|ref|YP_004316286.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
 gi|326549231|gb|ADZ77616.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
          Length = 383

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 175/341 (51%), Gaps = 24/341 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y H PFC + C YCDF+ S   +YK      +++   E++          I++I+FGG
Sbjct: 3   GIYFHIPFCKQACHYCDFHFSTSIKYK---NEMLEAMAKELRLQSSYLHTDRINTIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E   I+ +LD  ++++ +S+ VEIT+EANP  +     + +R+  +NR S+G+Q
Sbjct: 60  GTPSILEASEISFLLDEASRHYDISNTVEITLEANPDDLGKTKIEAFRRTSINRFSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+++ R H A EA +AI   ++  F  ++ DLIY  P  T  +W   +Q+ +  
Sbjct: 120 SFYDEDLKWMNRAHTAQEADSAIKRVQDAGFDDITADLIYGYPLLTDEKWLNNIQKLVQL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + H+S Y LT+E  T    + K G    +  E  A     L +++   +    YEISN 
Sbjct: 180 HIPHISAYSLTVEPKTALAHLIKVGKYKKMDDEQAAAQFLQLIETL-DGYAYEHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHS------RVKVGSHRVAISIEKHPESWLKMVRK 310
           +     + HN NYW+   Y+GIGP AHS      +  + +++  I+   H          
Sbjct: 239 ALPSRYAKHNTNYWKSKPYLGIGPSAHSFNGLQRQWNINNNQQYITSINHQR-------- 290

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 E E LS   + +E++M  LR   G+ ++  E L G
Sbjct: 291 ---VPAEVETLSEIDRINEYIMTSLRTMWGLDLEYLERLYG 328


>gi|189501789|ref|YP_001957506.1| hypothetical protein Aasi_0352 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497230|gb|ACE05777.1| hypothetical protein Aasi_0352 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 375

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 196/386 (50%), Gaps = 24/386 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFN--SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G+Y+H PFC + C YCDF+  +++R+         Q  + +  ++ Q+     I+SI+ G
Sbjct: 3   GIYIHIPFCKQACHYCDFHFSTNMRQKSEMLAAIQQELILQKDYLNQV----EINSIYLG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+E + IA +L  I + +     +EIT+EANP  +++       K G+NR+S+G+
Sbjct: 59  GGTPSLLEVEEIAALLIDIRQIFRCKEGLEITLEANPDDIDLKKLLALLKIGINRLSIGI 118

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+     L++L R H+ ++A  ++ +A    F   + DLIYA+P QT    + +L  AL 
Sbjct: 119 QTFHNNLLQYLNRAHDTTKATQSLEIALQAGFNNFNLDLIYAIPGQTKEMLKRDLLTALQ 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   H+S Y LTIE+ T+F +  + G + +  + +A   ++L     + +G + YE+SN 
Sbjct: 179 FKPTHISAYCLTIEQKTVFGRWLETGKIEVVQDEIAAKHFHLLVDTLTDNGYNHYEVSNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                 + HN NYW+ G Y+G+GPGAHS           +  ++ +S      + G    
Sbjct: 239 GLPEYHAQHNTNYWKRGSYLGVGPGAHSYNGTSRQYNIANNTRYIQSI-----QAGIIPS 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIER--- 370
             E L  +   +E++M  LR + G      +M   RN    D++       +  I R   
Sbjct: 294 TIEILQPQDHINEYIMTSLRTQWGC-----DMALLRNNYQYDLQATHPSYLELLINRQLA 348

Query: 371 -VQFSRLRCTQRGMTMLDSVIANLAV 395
            +Q + L  T  G  + D + A+L +
Sbjct: 349 YIQENVLILTVDGKLIADKIAADLFI 374


>gi|325297201|ref|YP_004257118.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           salanitronis DSM 18170]
 gi|324316754|gb|ADY34645.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           salanitronis DSM 18170]
          Length = 377

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 198/381 (51%), Gaps = 18/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC ++C YCDF S  +    GQ + +I++   E++  +       I +++ GG
Sbjct: 3   GIYLHIPFCKRRCIYCDFFSTTQS---GQTDRYIEALCAELEQRKDYLEDEEIETVYMGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ ++   + D +  ++++  + EITIEANP  +     +  R    NR+S+G+Q
Sbjct: 60  GTPSQLQEKHFEALFDTLYHHYSIRPDAEITIEANPDDLHPTYIRMLRHFPFNRLSMGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  + +L  L R HNA +A+ A    R   F  +S DL+Y LP +T+  W+ +L++A++ 
Sbjct: 120 TFNDATLSVLQRRHNARQALEAFWNCREAGFGNISIDLMYGLPGETLATWQADLKQAVTL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNH 256
             +H+S Y L  E+GT  +K+ +   +    E+++V+L++ L  ++ +A G   YEISN 
Sbjct: 180 HPEHISAYHLIYEEGTPLWKLREQHRVNEIDEDLSVNLFSELIHTLKNA-GYEHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                 S HN +YW    Y+G G  AHS           S+EK+         +N     
Sbjct: 239 CLPDKYSRHNSSYWTGKTYLGCGASAHSYNGTSRQWNIASLEKYITG-----IENHKPDF 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC----ERNLQRQGFIERVQ 372
           EKE L    + ++F++  LR   G+S+   +   G  L   C      +LQ+    +   
Sbjct: 294 EKEELDLYTRYNDFIITSLRTMWGMSLTRLKTGFGEKLYDYCIHLATPHLQQHTLQQTNG 353

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
           F  L+ T +G+ + D ++++L
Sbjct: 354 F--LKLTGQGIFISDGIMSDL 372


>gi|289676366|ref|ZP_06497256.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 306

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 167/303 (55%), Gaps = 12/303 (3%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+QS EE  L+ LGR 
Sbjct: 7   LLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGIQSFEESKLKALGRI 66

Query: 152 HNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
           HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++ A  HLS YQLT+E
Sbjct: 67  HNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIALAPTHLSWYQLTLE 126

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW 270
             T+F+        +LP +++  D+    Q + + HG   YE+S ++  G  + HNLNYW
Sbjct: 127 PNTVFWNQPP----MLPEDDILWDIQETGQQLLATHGYAQYEVSAYAQPGKPARHNLNYW 182

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
            +GD+IGIG GAH ++     R+  + + + P+ +L     +       + L  ++   E
Sbjct: 183 AFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYLN---PDKPFQAGSKLLPLDELPFE 239

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLD 387
           FLM  LRL  G+    +    G +LD   E  R  +++G + +   +RL  T +G   L+
Sbjct: 240 FLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQDP-TRLIATPQGQLFLN 298

Query: 388 SVI 390
            ++
Sbjct: 299 DLL 301


>gi|307104111|gb|EFN52366.1| hypothetical protein CHLNCDRAFT_138795 [Chlorella variabilis]
          Length = 472

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 187/382 (48%), Gaps = 58/382 (15%)

Query: 20  GVYVHWPFCVKKCPYCDF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
             YVH PFC +KC YCDF             HV+      + +++  + E++  ++L   
Sbjct: 29  AAYVHLPFCKRKCSYCDFPVIAVGKDLAGTPHVQD---NMQRYVEMVVQEIEASQRLNS- 84

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + S+FFGGGTPSLI    +  +L  + + + +++  E++IEA+P + +    + Y   
Sbjct: 85  EPLQSVFFGGGTPSLISLPLLEQLLAALDQRFGLAAGAEVSIEADPGTFDAARLRSYMGM 144

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           GV R+S+GVQS +++ L   GR H+A++   AI A+H A    P  S DL+  LP+ T  
Sbjct: 145 GVTRVSVGVQSFQDELLALCGRAHDAADVYRAIEAVHAAG--VPSWSLDLMSGLPQLTQE 202

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W+  L++AL  A  H+S Y L +E+ T F K +  G+  LPS++ A D+Y         
Sbjct: 203 LWQRSLEQALDAAPHHISTYDLQVEEHTPFAKRYWPGEAPLPSDDAAADMYCQASHTLRG 262

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK------------VGSHRV 293
            G   YE+SN++  G    HN+ YW+ G + G+G G+ S ++            +G H++
Sbjct: 263 AGFEHYEVSNYALPGHRCRHNMVYWQGGAFYGLGLGSASYLQARGRAAGSATHLIGRHQL 322

Query: 294 AISIE---------KHP------ESWLKMVRKNGHAV---VEKEFLSSEQQADEFL---- 331
           A               P      + WL+    +   +   V   FL  E  ADE L    
Sbjct: 323 AGRCRLPGSCGRRFSRPKRLNAYKQWLEQFAADAEQLGPRVPGAFLPPE-SADEVLLDSV 381

Query: 332 MMGLRLREGISVKDWEMLAGRN 353
           M+ LRL +G+   D   LA R+
Sbjct: 382 MLRLRLADGL---DLSQLAARH 400


>gi|124026436|ref|YP_001015551.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. NATL1A]
 gi|123961504|gb|ABM76287.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. NATL1A]
          Length = 410

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 181/360 (50%), Gaps = 25/360 (6%)

Query: 21  VYVHWPFCVKKCPYCDFN-----SHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSI 71
            Y+H PFC K+C YCDF+        +         I ++L  +   R+++    GP ++
Sbjct: 8   AYLHIPFCHKRCFYCDFSIIPLGDSAQAPDSPGITSINAYLDLLH--REISISPKGP-AL 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+I+ GGGTPSL++   +  +L  + + +      EIT+E +P++   N+  GY   G+N
Sbjct: 65  STIYLGGGTPSLLKKNEVGDLLQNLQRKFGFQDGAEITMEVDPATFFENDLHGYIGIGIN 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQ 186
           R SLG Q+ ++ +L  +GR HN S+ I A     N+F +      S DLI  LP   +++
Sbjct: 125 RFSLGAQAFDDSTLASIGRKHNRSQLIEACDWVNNLFKKGMLRSWSLDLIQNLPGLNLSK 184

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  EL++A+     HLS+Y LTIE  T+F ++HK G L +P ++ +  +   T  +  + 
Sbjct: 185 WIKELEQAVRTEAPHLSIYDLTIEPDTVFGRLHKKGKLNIPIDSESQKIDFETTRLLKSR 244

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEKHPES 303
           G   YEIS++S  G  S HN  YW    + G G G+ S     +    R     +K    
Sbjct: 245 GFARYEISSYSLPGHASRHNRMYWSGSGWWGFGMGSTSAPWGERFSRPRTIAGYKK---- 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           WL+               S     DE LM+GLR REGI +++    AG     +C++NL+
Sbjct: 301 WLEQQESQSLEKTLSIEKSKSMPLDELLMIGLRRREGIHLEELAKNAGWT-QKKCDKNLK 359


>gi|123969042|ref|YP_001009900.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. AS9601]
 gi|123199152|gb|ABM70793.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. AS9601]
          Length = 407

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 198/398 (49%), Gaps = 31/398 (7%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
            YVH PFC ++C YCDF      + V   K      +Q +L  + + +  +     +S+I
Sbjct: 8   AYVHIPFCHRRCFYCDFAVIPLGNKVETLKGYGSKTVQEYLQFLFKEILSIKHKSPLSTI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS+++P  I  ++D   +N+ +    EIT+E +P+S   ++  G+  AG+NR S
Sbjct: 68  YIGGGTPSILDPSQIKELIDLFKENYGIDYGAEITMEIDPASFTQDDLFGFINAGINRFS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEA-IAAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           LGVQS   Q L+  GR H   +A  +   L R     +    S DLI  LP     +W+ 
Sbjct: 128 LGVQSFNNQVLQKSGRRHLKEDAEKSCFWLKREYDSGLIKSWSLDLIQNLPLSGFKEWQD 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A++++  HLS+Y L IE GT+F K+   G L LPS+  AV     T  I    G  
Sbjct: 188 DLKKAITFSPPHLSIYDLNIENGTVFKKLVNLGKLKLPSDEEAVRNSESTHLILKNLGYS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN+   G +S HN  YW    + G G G+ S    G       + K  + W  ++R
Sbjct: 248 RYEISNYCLPGHQSRHNRVYWSGLGWWGFGQGSTSS-PWGEKLTRPRVSKEYKEW--VIR 304

Query: 310 KN----GHAVVEKEFLSSEQQADEFLMMGLRLREGISVK------DWEMLAGRN----LD 355
           +       ++  K+F+  E   DE +M+GLRL+EG+ +K      +WE     +    L 
Sbjct: 305 QYEFNLDSSLTNKDFVYKE--LDEKIMLGLRLKEGLDIKKVFQEQNWENKKFESNFSKLL 362

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E ER L+  G + R  +        GM + + V+ ++
Sbjct: 363 KEWERFLE-SGLLVRKGYRFFLSEPNGMELSNQVLVSM 399


>gi|197120672|ref|YP_002132623.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. K]
 gi|196170521|gb|ACG71494.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. K]
          Length = 379

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 166/333 (49%), Gaps = 6/333 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVH+P+C  +CPYCDF     R   G   + ++   E+          S+ S++
Sbjct: 2   ARPFGVYVHYPYCTHRCPYCDFAVTTER-PPGAGRYARAVRAELGLRAPAFEGLSLRSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +   I  +L  +   + ++ + E+T+E NP S +    + +R AGVNRIS+
Sbjct: 61  LGGGTPSLWDADEIGDVLAAVRDRFGLAEDAEVTLEVNPESSDPARLEAWRAAGVNRISV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +   L  LGR H    A  AI  A      +S DLIY   + ++     + +RA+
Sbjct: 121 GVQSFDPGVLAKLGRRHGPERAERAIREAAAALGNVSVDLIYGARRSSVETARRDAERAV 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                H+S Y LT++   +       +M ++G L LPS+  A+      ++     GL  
Sbjct: 181 EAGAVHVSAYALTLDPDVMAEEVPLARMRREGRLPLPSDEDALAQAAALRAALRRLGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES+HN  YWR+  Y+G+G GA+   +  +  V     +   +WL  V  
Sbjct: 241 YEISNFARPGRESVHNGLYWRHESYLGLGAGAYGCRRGEAGSVRYGNLRDAGAWLAAVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 E++ + +    +E LM+ LR R+G  +
Sbjct: 301 GRLPTAEEDRIDARADRNERLMLALRTRDGAPL 333


>gi|15673121|ref|NP_267295.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724101|gb|AAK05237.1|AE006346_6 oxygen-independent coproporphyrogen III oxidase [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406685|gb|ADZ63756.1| oxygen-independent coproporphyrinogen III oxidase [Lactococcus
           lactis subsp. lactis CV56]
          Length = 379

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 18/337 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSI 71
           Q  NS   Y H PFC   C YCDF    +    GQ  + +I+S + E Q          +
Sbjct: 3   QKPNS--AYFHIPFCSHICYYCDF---AKVLMTGQPIDAYIESLIEEFQSFE----IEKL 53

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +I+ GGGTPS++  Q +  +L  IA+   +    E T+EANP  +     +    + VN
Sbjct: 54  RTIYIGGGTPSVLSAQQLERLLTAIAEQLDLEVLEEFTVEANPGDLSDEVIKVLADSAVN 113

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEME 190
           RISLGVQ+     L+ +GR H   +   ++  L +  F  ++ DLIYALP QTM   + +
Sbjct: 114 RISLGVQTFNNALLKKIGRTHTEVQVYDSVERLKKAGFENITIDLIYALPGQTMEMVKSD 173

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ L   + H++LY L +E  T+F    + G L LPSE+   D+Y     I + +G + 
Sbjct: 174 VEKFLELKLPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAKNGYNH 233

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN    G ES HN+ YW   +Y GIG GA   +    ++    +  + ++     R 
Sbjct: 234 YEVSNFGLPGFESKHNITYWDNEEYYGIGAGASGYLAGIRYKNLGPVHHYLKAAPTEKRI 293

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           N      +E LS + Q +E + +GLR + G+ V+ +E
Sbjct: 294 N------EEVLSKKSQIEEEMFLGLRKKSGVLVEKFE 324


>gi|281491634|ref|YP_003353614.1| oxygen-independent coproporphyrinogen-III oxidase [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375352|gb|ADA64865.1| Oxygen-independent coproporphyrinogen-III oxidase [Lactococcus
           lactis subsp. lactis KF147]
          Length = 379

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 171/337 (50%), Gaps = 18/337 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSI 71
           Q  NS   Y H PFC   C YCDF    +    GQ  + +I+S + E Q          +
Sbjct: 3   QKPNS--AYFHIPFCSHICYYCDF---AKVLMTGQPIDAYIESLIEEFQSFE----IEKL 53

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +I+ GGGTPS++  Q +  +L  IA+   +    E T+EANP  +     +    + VN
Sbjct: 54  RTIYIGGGTPSVLSAQQLERLLTAIAEQLDLEVLEEFTVEANPGDLSDEVIKVLADSAVN 113

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEME 190
           RISLGVQ+     L+ +GR H   +   ++  L +  F  ++ DLIYALP QTM   + +
Sbjct: 114 RISLGVQTFNNALLKKIGRTHTEVQVYDSVERLKKAGFENITIDLIYALPGQTMEMVKSD 173

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ L   + H++LY L +E  T+F    + G L LPSE+   D+Y     I + +G + 
Sbjct: 174 VEKFLELKLPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAKNGYNH 233

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN    G ES HN+ YW   +Y GIG GA   +    ++    +  + ++     R 
Sbjct: 234 YEVSNFGLPGFESKHNITYWDNEEYYGIGAGASGYLAGIRYKNLGPVHHYLKAAPTEKRI 293

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           N      +E LS + Q +E + +GLR + G+ V+ +E
Sbjct: 294 N------EEVLSKKSQIEEEMFLGLRKKSGVLVEKFE 324


>gi|291557745|emb|CBL34862.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium siraeum V10Sc8a]
          Length = 364

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/349 (34%), Positives = 170/349 (48%), Gaps = 42/349 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNS------HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G+Y+H PFC+ KCPYCDF S         RYK      ++ +L++ + +R         +
Sbjct: 4   GLYIHIPFCLSKCPYCDFYSVAFDSDTANRYKDAVIRNLRCYLSQNENLR-------FDT 56

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTP L+  + I  I+D I     ++S  EIT+EANP   + N     +   VNRI
Sbjct: 57  VYFGGGTPILLW-REICDIMDEIQP--YIASGAEITVEANPCCTDENALCSLKTHNVNRI 113

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+QS  +  L+ LGR HN+     A+ +A +  F  +S D++  +P QT       + 
Sbjct: 114 SFGLQSGIDNELKALGRRHNSKVGADAVKMAYKAGFDNISGDIMLGIPLQTSDSLIETIN 173

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              S  + H+S Y L IE  T F K H    L+LP E+   ++Y  T    S  G   YE
Sbjct: 174 YMTSLPLSHISAYMLKIEPDTPFSKRH----LILPDEDGYANIYLETIERLSDKGFRQYE 229

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----RVKVGSH-RVAISIEKHPESWLK 306
           ISN +  GA+S HNL YWR  +Y+GIGP AHS     R  VG   R  I  E  P     
Sbjct: 230 ISNFAKTGAKSRHNLRYWRCEEYLGIGPAAHSYFNGERFAVGRDLRAFIESEVQPA---- 285

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                   + E+E    E+ A    M+ LRL EG+     E   G   D
Sbjct: 286 -------VITERECGDYEEWA----MLKLRLSEGLDFDTAEKRFGITKD 323


>gi|126436063|ref|YP_001071754.1| coproporphyrinogen III oxidase [Mycobacterium sp. JLS]
 gi|126235863|gb|ABN99263.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. JLS]
          Length = 392

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 179/392 (45%), Gaps = 24/392 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWM-RQLTG 67
           +        G+Y+H PFC  +C YCDFN++      G   E ++ +   E+    R L  
Sbjct: 13  LAATAGRPFGLYIHVPFCATRCGYCDFNTYTPAEAGGANPEGWLVAMRQELALAARTLGT 72

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  + ++F GGGTPSL+    +  +L  + +++ ++   E+T EANP S     F     
Sbjct: 73  PPPVRTVFVGGGTPSLLGGAGLTAVLAAVREHFELAPGAEVTTEANPESSGPELFDALLA 132

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS     L+ L R H+   A+AA   AR      ++ DLIY  P +T   
Sbjct: 133 AGYTRVSLGMQSTARHVLKVLDRLHSPGRAVAAAGEARAAGFGHVNLDLIYGTPGETDDD 192

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L  +     
Sbjct: 193 LRRSADAAIGAGVDHVSAYALVVEDGTALARRVRRGEVTAPDDDVLAARYELLDARLGEA 252

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+SN +  G E  HNL YW  G++ G+GPGAH    +G  R      +HP ++  
Sbjct: 253 GFDWYEVSNWARFGGECRHNLGYWAGGEWWGVGPGAHG--FLGDTR--WWNVRHPNAYAT 308

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +      V + E L    +  E +M+ +RLR G+            LD+       R G
Sbjct: 309 ALGDGALPVSDFEVLDPAARHTEDVMLRVRLRSGLP-----------LDMLTADERSRVG 357

Query: 367 FI-----ERVQFSRLRCTQRGMTMLDSVIANL 393
            +       V  + L  T RG  + D V+  L
Sbjct: 358 TVVADGLAVVDGAALVLTDRGRLLADGVVRTL 389


>gi|325282290|ref|YP_004254831.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           proteolyticus MRP]
 gi|324314099|gb|ADY25214.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           proteolyticus MRP]
          Length = 378

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 192/382 (50%), Gaps = 32/382 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISSIFFG 77
           +YVH PFC   CPYCDF+   R     Q   ++ +L +++   +      P  + +++ G
Sbjct: 12  LYVHVPFCPSICPYCDFHVLTR-----QSGLVEQYLAQVEREAERLAAEYPVELDTVYLG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +    +A ++ G  + W      E T+E NP +V       +R  G +R S+GV
Sbjct: 67  GGTPSFLRDSEMAALV-GSVQRWLGWGRAENTLEINPGTVSAERAAHWRALGFDRASVGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL + +L FLGR H+A++A AA+ HL    F R+S DLI A+  Q +   E +++    
Sbjct: 126 QSLHDPTLLFLGRRHSAAQARAAVEHLLAREF-RVSGDLITAVAGQPL---EADIRGLHE 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H+S Y LTIE GT F +       V  SE      + +T ++ +  G   YEISN+
Sbjct: 182 LGVGHISAYTLTIEPGTEFARRG-----VTVSEADERRGFEVTAALLAELGYERYEISNY 236

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI-SIEKHPESWLKMVRKNGHAV 315
           +  G +S HNL YW    Y+G+GPGA       +  V++     H   WL   +      
Sbjct: 237 ARPGQQSQHNLAYWHTRHYLGLGPGAAGHYPAAAPAVSMRRTNPHLHEWLAGAQG----- 291

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE----CERNLQRQGFIERV 371
            E E ++      + L MGLRLR G+++ +    +G ++  E       N++R   ++  
Sbjct: 292 -EAELVTGHDWVTDALFMGLRLRTGVNLAELSRRSGVDVAREYAPAIRANVERGLLVQEG 350

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
           Q  +L+ T+ G  +L+SVI + 
Sbjct: 351 Q--QLQATEAGWWILNSVIGDF 370


>gi|108800439|ref|YP_640636.1| coproporphyrinogen III oxidase [Mycobacterium sp. MCS]
 gi|119869568|ref|YP_939520.1| coproporphyrinogen III oxidase [Mycobacterium sp. KMS]
 gi|108770858|gb|ABG09580.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. MCS]
 gi|119695657|gb|ABL92730.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. KMS]
          Length = 392

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 179/392 (45%), Gaps = 24/392 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWM-RQLTG 67
           +        G+Y+H PFC  +C YCDFN++      G   E ++ +   E+    R L  
Sbjct: 13  LAATAGRPFGLYIHVPFCATRCGYCDFNTYTPAEAGGANPEGWLVAMRQELALAARTLGT 72

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  + ++F GGGTPSL+    +  +L  + +++ ++   E+T EANP S     F     
Sbjct: 73  PPPVRTVFVGGGTPSLLGGAGLTAVLAAVREHFDLAPGAEVTTEANPESSGPELFDALLA 132

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS     L+ L R H+   A+AA   AR      ++ DLIY  P +T   
Sbjct: 133 AGYTRVSLGMQSTARHVLKVLDRLHSPGRAVAAAGEARAAGFGHVNLDLIYGTPGETDDD 192

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L  +     
Sbjct: 193 LRRSADAAIGAGVDHVSAYALVVEDGTALARRVRRGEVTAPDDDVLAARYELLDARLGEA 252

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+SN +  G E  HNL YW  G++ G+GPGAH    +G  R      KHP ++  
Sbjct: 253 GFDWYEVSNWARSGGECRHNLGYWAGGEWWGVGPGAHG--FLGDTR--WWNVKHPNAYAT 308

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +      V + E L    +  E +M+ +RLR G+            LD+       R G
Sbjct: 309 ALGDGALPVSDFEVLDPAARHTEDVMLRVRLRSGLP-----------LDMLTADERSRVG 357

Query: 367 FI-----ERVQFSRLRCTQRGMTMLDSVIANL 393
            +       V  + L  T RG  + D V+  L
Sbjct: 358 TVVADGLAVVDGAALVLTDRGRLLADGVVRTL 389


>gi|262039168|ref|ZP_06012488.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia goodfellowii F0264]
 gi|261746784|gb|EEY34303.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia goodfellowii F0264]
          Length = 383

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 194/388 (50%), Gaps = 34/388 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +  N   +Y+H PFC KKC YCDF + +   R Y    E + ++ + E++   +      
Sbjct: 21  EQKNIDALYLHIPFCEKKCEYCDFCTFINMSREY----EKYTKALIKELKMYPEY----E 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++FGGGTPSL+  +  A I+  I        N EIT+E NP+ +     +  RK G+
Sbjct: 73  YDTVYFGGGTPSLLPVEMTAEIMSNIR----YKENSEITLELNPNDMTAEKLKELRKTGI 128

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +   L+F+GR H+  +A+     AR   F  +S DL++ +P Q+    + 
Sbjct: 129 NRLSIGIQSFQNHVLKFIGRLHSGEDAVRVFRDARKAGFENISIDLMFGIPNQSFEDLKK 188

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+  L  + D++S+Y L  E+GT+F+   K G L    +++  ++Y         +G  
Sbjct: 189 DLENILLLSPDNISIYSLIWEEGTVFWSKLKKGILSEMDQDLEAEMYEEIIDFLKKNGYS 248

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN S  G   +HNL YWR  ++IG+G  A +      +    +  K    + K + 
Sbjct: 249 HYEISNFSKKGRGGIHNLKYWRNKEFIGVGLSAATYFNGKRYSNVRTFNK----YYKSLE 304

Query: 310 KNGHAVVEKEFLSSEQQADEFL--MMGLRL-REGISVKDWEMLAGRNLDIECERNLQRQG 366
           +N   V EK     ++   E L  M+GLRL  EGI          +N  +E   +L  +G
Sbjct: 305 ENILPVDEKSVEIIDETEKEKLKNMLGLRLTEEGIKY-------FQNEKVE---SLLERG 354

Query: 367 FIERVQF-SRLRCTQRGMTMLDSVIANL 393
            +ER     R+R T++G+ + + V    
Sbjct: 355 LLERFDSGKRMRLTRKGILLANEVFVEF 382


>gi|260060744|ref|YP_003193824.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Robiginitalea biformata HTCC2501]
 gi|88784874|gb|EAR16043.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Robiginitalea biformata HTCC2501]
          Length = 377

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 192/386 (49%), Gaps = 29/386 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC + C YCDF+ S   ++K G    +++   EM+  R   G +   +++FGG
Sbjct: 3   GIYLHIPFCKQACHYCDFHFSTTLKHKQG---LLEAMELEMEQRRDELGGQPAETLYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    I  ++   A  + ++++ EIT+EANP  +     +    + VNR+S+G+Q
Sbjct: 60  GTPSLLTGAEIGQLIRRAAACFGLAADAEITLEANPDDLPPGRLEELALSPVNRLSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  E  LR++ R H+A EA+  +  A   F   S DLIY +P      W+  L+ AL + 
Sbjct: 120 SFHETELRWMNRAHSAREALECLEHAAARFANYSIDLIYGIPGSRPDDWKRTLEVALGFD 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLP---SENVAVDLYNLTQSITSAHGLHAYEISN 255
             H+S Y LT+E  T   +    G  V P         D  +L +++  A G   YEISN
Sbjct: 180 PPHISAYALTVEPDTALARFIDKG--VTPGVDDHRAREDFSHLVETLQQA-GYDHYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KNGH 313
               G  S +N  YW+   Y+GIGP AHS    G+ R  ++      S LK +R    G 
Sbjct: 237 FGKPGFHSRNNTAYWQGKSYVGIGPSAHS-FDGGNRRWNVA------SNLKYLRAVTEGK 289

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG--FIER- 370
              E E LS+  + +E +M GLR + G+S    E   G          L++Q   ++E+ 
Sbjct: 290 TYWEAEQLSTRDRYNEAVMTGLRTQWGVS----ENRVGSEFGPRYAEYLRQQAAPYLEKG 345

Query: 371 ---VQFSRLRCTQRGMTMLDSVIANL 393
               +   L  T+ G  ++D + ++L
Sbjct: 346 LLASRSGHLVATEAGKFLVDGIASDL 371


>gi|149182768|ref|ZP_01861232.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
 gi|148849534|gb|EDL63720.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
          Length = 355

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 17/348 (4%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEI 108
           NF++    EMQ          +S+IF GGGTP+ ++   + ++   I +N   S   VE 
Sbjct: 11  NFLKK---EMQMQLDKYPSDKLSTIFVGGGTPTALDASQLEVLCQSINENLPYSPEEVEF 67

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           T EANP  +  +  +   + GVNR+S GVQS  ++ L+ +GRNH + +   +I  A+   
Sbjct: 68  TFEANPGDLTSDKLEVLHQHGVNRLSFGVQSFNDELLKRIGRNHRSKDVYTSIEAAKKAG 127

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  +S DLIYALP QT+  ++  L+ AL + + H S Y L IE  T+FY + + G L LP
Sbjct: 128 FENISIDLIYALPGQTVADFKDTLKTALEFDLPHYSSYSLIIEPKTVFYNLMRKGKLSLP 187

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            +    ++Y++        G++ YEISN +  G ES HNL YW   +Y G G GAH   K
Sbjct: 188 PQEAEAEMYSVLMEEMETAGINQYEISNFAKKGYESRHNLVYWNNDEYYGFGAGAHGYAK 247

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGH-AVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              +     ++K+ E   +     GH  V+E    +  ++ +E + +GLR  EG+SV  +
Sbjct: 248 GNRYANFGPLKKYMEPLAE-----GHLPVIESHEQTKSEKMEEEMFLGLRKTEGVSVARF 302

Query: 347 EMLAGRN----LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               G +         E   Q++  I  V+ S +R TQ+G  + + V 
Sbjct: 303 TEKFGESPFSVFKEAIEEMTQKELLI--VEDSYIRLTQKGRFLGNEVF 348


>gi|227504546|ref|ZP_03934595.1| coproporphyrinogen dehydrogenase [Corynebacterium striatum ATCC
           6940]
 gi|227198866|gb|EEI78914.1| coproporphyrinogen dehydrogenase [Corynebacterium striatum ATCC
           6940]
          Length = 347

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 169/348 (48%), Gaps = 16/348 (4%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           ++ +   E+    Q  G R   ++F GGGTPS++  Q +  IL  + + + ++   E+T 
Sbjct: 9   YLDALERELGMAAQQVG-RPAETVFIGGGTPSMLGAQGLGRILGRVKETFGLAPGAEVTT 67

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FP 169
           E+NP S     F+G  ++G  R+SLG+QS  +  LR L R H    A  A   AR   F 
Sbjct: 68  ESNPESTSPEYFEGLLESGFTRVSLGMQSASDSVLRVLERAHTPGRAFDAAREARAAGFE 127

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ D+IY  P +T     + L R L   VDH+S Y L +E GT   +    G L  P E
Sbjct: 128 HVNLDMIYGTPTETDDDVRLTLDRVLETGVDHVSAYSLIVEDGTRMARKVNKGLLPAPDE 187

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
           +V    Y    +   A G   YE+SN +  G E  HN  YW  G++ G GPGAHS   +G
Sbjct: 188 DVLARRYEAVSATLEAEGFEWYEVSNWAKPGGECQHNRIYWVDGNWWGAGPGAHS--HLG 245

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           + R      K P  + +M+ +    V E+E L+  ++  E +M+GLRLREGI    W   
Sbjct: 246 NER--FYNVKLPRRYNEMLGRGELPVKERETLTDAERHMEKVMLGLRLREGIPAG-WLGS 302

Query: 350 AGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               +  D  C   LQR G        RL  T+ G  + D +I +L V
Sbjct: 303 GAEPVIADYICRGLLQRAG-------DRLCLTKPGRLLADGIITDLLV 343


>gi|262182977|ref|ZP_06042398.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 310

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 154/309 (49%), Gaps = 8/309 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  G+Y+H PFC  +C YCDFN++      G    +++ +   E++ M  +   R   ++
Sbjct: 2   DPFGLYIHVPFCASRCGYCDFNTYTPGELGGDLTSDYLVALEKELE-MAAVQVDREAETV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+  + +  +L  +   + ++   E+T E+NP S     F G   AG  R+S
Sbjct: 61  FIGGGTPSLLGAEGLGRVLSKVRDTFGLAPGAEVTTESNPESTSPEYFAGLLDAGFTRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS     L  L R H    A  A   A    F  ++ D+IY  P +      + L+R
Sbjct: 121 LGMQSASPGVLAVLERAHTPGRAFDAAREAIAAGFEHVNLDMIYGTPTEEDADVALTLER 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   A G   YE+
Sbjct: 181 ALETGVDHISAYSLIVEDGTRMARKVSKGLLPAPDEDVLARRYEMISSTLEAEGFEWYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN  YW  G++ G GPGAHS   +G+ R      K+P +++K V +   
Sbjct: 241 SNWAKPGGECQHNRIYWVDGNWWGAGPGAHSH--LGNER--FYNVKNPRTYIKAVGEGEL 296

Query: 314 AVVEKEFLS 322
            + E+E L+
Sbjct: 297 PIKEREQLT 305


>gi|223935942|ref|ZP_03627857.1| oxygen-independent coproporphyrinogen III oxidase [bacterium
           Ellin514]
 gi|223895543|gb|EEF61989.1| oxygen-independent coproporphyrinogen III oxidase [bacterium
           Ellin514]
          Length = 389

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 190/382 (49%), Gaps = 24/382 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  KC YC F S     ++    ++ + + E++ +     PR+I   FFGGGT
Sbjct: 13  LYVHVPFCAHKCSYCAFYSEASNGEI-INRYVCALIRELEMVASDLKPRTI---FFGGGT 68

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+  +    IL  + +   ++   E T+E NP++V +   +  R  GVNRIS+GVQSL
Sbjct: 69  PSLLNLRQWEQILQTMQR-LGLTGAAEWTVECNPATVSLEKAKLLRSFGVNRISMGVQSL 127

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +E  L  LGR H+      +    R   F  ++ DL++A+P QTM  W   L  A +   
Sbjct: 128 DENLLDRLGRIHSREMVFKSFDTLRAAGFDNVNIDLMFAIPGQTMKIWRDTLAEATALGS 187

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN---H 256
           +HLS Y++  E  T  Y   K G+  +  E +A  +Y    ++ SA G H YEI+N   H
Sbjct: 188 EHLSSYEVIYEDDTPLYAQLKAGEFDV-DEALACAMYEELVTVASASGFHQYEIANFAKH 246

Query: 257 SFLGAESL------HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           S      +      HN+NYWR G Y G+GP A   V+   ++   + + + E     + +
Sbjct: 247 SAATPSDIPDHACQHNVNYWRGGCYYGLGPSATGNVRGIRNKNWSNTQMYCEQ----LEQ 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGF 367
              A+  KE L+   +A E    GLR+  G   + ++ + G +L  +  R +    +QG+
Sbjct: 303 GKRAIESKEELAPLSRAGEIAAFGLRMNAGWPFEKFKQVTGCDLRHDWSREMDQLVQQGW 362

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
               Q+ R + T RG+   DS 
Sbjct: 363 GRLDQY-RFQLTSRGLRFADSA 383


>gi|325281306|ref|YP_004253848.1| oxygen-independent coproporphyrinogen III oxidase [Odoribacter
           splanchnicus DSM 20712]
 gi|324313115|gb|ADY33668.1| oxygen-independent coproporphyrinogen III oxidase [Odoribacter
           splanchnicus DSM 20712]
          Length = 373

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 191/386 (49%), Gaps = 23/386 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSI 74
           +G+YVH PFC  KC YC F      Y V      ++++     E+Q  +       + ++
Sbjct: 1   MGIYVHIPFCRSKCYYCGF------YSVASTQLKKAYIAALGHEIQLRKDYLDTSEVKTL 54

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS +    +  I+  +  N+ ++   E TIEANP  +  +  +G+R  G +R+S
Sbjct: 55  YFGGGTPSWLSMDELTDIVTTLEMNFALNCVAERTIEANPEDITRDKLKGWRALGFDRLS 114

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  ++ L+ + R H A +A+ ++  A +  F  +  DLI  LP  T    + +++ 
Sbjct: 115 IGIQSFNDEVLKRINRTHTAQDALRSVEWAADSGFENIGIDLILGLPGYTRLHLQQDMEI 174

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + HLS+Y L+I+  T+F K+ + G     +++   D Y        + G   YEI
Sbjct: 175 VNHLPIIHLSVYLLSIDSNTVFEKLMQKGRFQPQTDDELADQYLWVSDYLKSIGFEHYEI 234

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +     SLHN +YW+   Y+G GP AHS   + S +  ++   H +S++  +  N  
Sbjct: 235 SNFAKNSKYSLHNTSYWQQQKYVGFGPAAHS-FDLNSRQWNVA---HLKSYIDNL-ANDR 289

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER--- 370
              EKE L+ + + +E++M  LR   GI     E +  +  D       +   F+E    
Sbjct: 290 LSFEKEILTDKDKFNEYIMTNLRTMWGIQE---EKMQLQFPDFSKTVRPKLAPFLENGSV 346

Query: 371 -VQFSRLRCTQRGMTMLDSVIANLAV 395
             Q  R+R T++G  + D V ++L V
Sbjct: 347 VCQNGRIRLTEKGWLVSDDVFSDLFV 372


>gi|260436089|ref|ZP_05790059.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. WH 8109]
 gi|260413963|gb|EEX07259.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. WH 8109]
          Length = 399

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 181/367 (49%), Gaps = 40/367 (10%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSIS 72
            Y+H PFC ++C YCDF         R         I+ +L+ +   R++    G   +S
Sbjct: 10  AYLHIPFCHRRCYYCDFAVVPLGDQARADHGPGSRSIREYLSLLH--REIASAPGGPPLS 67

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPSL+ P  I  ++D +A  + +    EIT+E +P++ +          GVNR
Sbjct: 68  TVYIGGGTPSLLCPDQIGALIDALANKFGLQPGAEITLEMDPATFDAAQLASVLAHGVNR 127

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-----ARNIFPRMSFDLIYALPKQTMTQW 187
           ISLG QS ++  L  LGR H  S+  AAI          +    S DLI  LP+QT+  W
Sbjct: 128 ISLGGQSFDDAVLEQLGRRHRQSDLHAAIDWLVQAWRDGVLRSWSLDLIQNLPEQTLAGW 187

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L +A++    HLS+Y L++E GT+F +    G L LP +++AV L   T    +A G
Sbjct: 188 NAQLDQAIASQAPHLSIYDLSVEPGTVFDRQRTLGRLKLPKDDLAVALMERTTQRLAAAG 247

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESW 304
           L  YEISN++  G  S HN  YW    + G G GA S    V++   R   +  +    W
Sbjct: 248 LSRYEISNYARPGHASRHNRVYWSGAGWWGFGMGATSAPWGVRLARPRTRAAYAE----W 303

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           L           E+    +    D+ L++GLR REG+      +L G    ++ E  L+R
Sbjct: 304 LDH-------PPEESIAEAGLPLDDQLLVGLRRREGV------ILQG----LDAESLLRR 346

Query: 365 -QGFIER 370
            Q F+ER
Sbjct: 347 WQPFVER 353


>gi|320332638|ref|YP_004169349.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           maricopensis DSM 21211]
 gi|319753927|gb|ADV65684.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           maricopensis DSM 21211]
          Length = 384

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 194/385 (50%), Gaps = 36/385 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTG--PRSISSIFFG 77
           +YVH PFC   CPYCDF+   RR  V     ++ +L ++ +  R L    P  + +++ G
Sbjct: 16  LYVHVPFCPTICPYCDFHVLQRRAGV-----VECYLAKLREDARALAAAYPVDLQTVYLG 70

Query: 78  GGTPSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTPS +    +A ++D +  +  W     +E T+E NP +V       +R  G +R S+
Sbjct: 71  GGTPSFLRDAELADLVDAVRTHLGW---GALENTLEVNPGTVSAARATHWRALGFDRASV 127

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL + +L+FLGR H+A  A  A+    +   R+S DLI A+  Q + +   +++  +
Sbjct: 128 GVQSLHDPTLKFLGRPHDAQAARDAVTTLLSGGFRVSGDLITAVEGQPLDE---DVRGLV 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V+H+S Y LTIE GT F +       V  SE+     +  T+++ +  G   YEISN
Sbjct: 185 ELGVEHVSAYTLTIEPGTPFARRG-----VQVSEDAERLGFERTEALLTGLGFERYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK---HPESWLKMVRKNG 312
           ++  GA S HN  YW    Y+G+GPGA     V      +   +   H   WL     + 
Sbjct: 240 YARPGAHSRHNRAYWTNQHYLGLGPGAAGHYPVTGTPGVLGERRTNAHLHEWLAGTDADV 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE----CERNLQRQGFI 368
             V  +EF++      + L MGLRLR+G+ + D    +G ++        E+++ R    
Sbjct: 300 DVVTPEEFVT------DALFMGLRLRDGVDLADLTTRSGVDVAARYAPVIEQHVARGTLT 353

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
             +  +RLR T +G  +L+ VIA+ 
Sbjct: 354 --LDGTRLRATPQGWWVLNQVIADF 376


>gi|218132899|ref|ZP_03461703.1| hypothetical protein BACPEC_00760 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991772|gb|EEC57776.1| hypothetical protein BACPEC_00760 [Bacteroides pectinophilus ATCC
           43243]
          Length = 391

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 197/399 (49%), Gaps = 29/399 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGP 68
           M    +  +G+Y+H PFC++KC YCDF S      V  EN+I + + E+      QL G 
Sbjct: 2   MNTDKNKQIGMYIHIPFCIRKCKYCDFVSEAASDFV-HENYINALIDEINGYDAGQLEG- 59

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYR 126
             + S+F GGGTPS ++ + I+ I+  + +++        EITIE NP +V   N + YR
Sbjct: 60  YGLRSVFIGGGTPSAVKAEYISRIMTAVKEHFADICGHLTEITIECNPGTVTAENLRIYR 119

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
            AG+NR+S G+QS  +  L  +GR H   +   +  LA    F  ++ DL++ LP QTM 
Sbjct: 120 DAGINRLSFGLQSAIDSELECIGRIHTWDDFKNSYRLAHEAGFENVNVDLMFDLPDQTMD 179

Query: 186 QWEMELQR--ALSYAVDHLSLYQLTIEKGTLFYKM----HKDGDLVLPSENVAVDLYNLT 239
            W+  L    AL     H+S Y L +E+GT          + G   +  E+    +Y+  
Sbjct: 180 TWKRTLADVCALEPKPSHISAYSLILEEGTPLAAQIESEREQGIDRMADEDTDRAMYHYA 239

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           QS  +  G H YEISN +    ES+HNL+YW   +YIG G  A S       R    I++
Sbjct: 240 QSYLAGEGYHQYEISNFAMPSMESIHNLSYWECKEYIGFGVAAASNKGDLRCRNTYDIDR 299

Query: 300 H-PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE-GISVKDWEMLAGRNLDIE 357
           +   +W            + E L+   +  EF+ +GLR+   G+  ++++     + D E
Sbjct: 300 YIAGAW--------QDKEDIEHLTERDRMSEFVFLGLRMTSAGVDTEEFKKRFAVSFD-E 350

Query: 358 CERNLQRQGFIERVQFS----RLRCTQRGMTMLDSVIAN 392
              ++   G+IE+   S    RL  T  G+ + + ++A+
Sbjct: 351 VFGDVT-AGYIEKGLLSMNDGRLTLTPHGIDVSNVIMAD 388


>gi|257066661|ref|YP_003152917.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
 gi|256798541|gb|ACV29196.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
          Length = 369

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 196/370 (52%), Gaps = 23/370 (6%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           + F  KKC YCDF +++   +   E +I++ + E++  ++      I +I  GGGTPS +
Sbjct: 5   YSFLSKKCYYCDFCAYMN-VENRVEPYIKNLIKEIKLYQERLNI-EIDTIHIGGGTPSYV 62

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + + I  I++ I K          TIE NP+S+       Y+  G+NRISLGVQS +++ 
Sbjct: 63  DAKYIEEIVNEIKKFKIEKIKEF-TIECNPNSISKEKLAIYKDIGINRISLGVQSFDDEV 121

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ +GRNH A  A+  I + R+  F  +SFDL+  LP+QT    + EL      + +H+S
Sbjct: 122 LKEIGRNHTADIALKDIDMIRDAGFDNLSFDLMLNLPRQTYKSVKNELAMVKKISPEHIS 181

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            Y L +E+G+ FY + K G L L  +++ V +++         GL  YEISN +    ES
Sbjct: 182 WYSLILEEGSRFYALDKKGKLGLMEDDLEVVIFSYLVDSLDKLGLKRYEISNFAKASKES 241

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
           +HN  YW   DYI  G GA   +    +    +  K+     K +R+  + +V +EF+  
Sbjct: 242 IHNKKYWNIDDYIAFGLGASGFLSNKRYTNTRNFVKYD----KAIREARYPIVFEEFIDK 297

Query: 324 EQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECERNLQRQGFIERVQ---FSRLR-- 377
           +++  E+++  LR  EGI+++++ E  A       C+  ++ Q  IE+ +   F +L   
Sbjct: 298 DEREKEYIIFKLRESEGINLREFKEKFA-------CDFLVKYQDVIEKFKDQDFYKLDDN 350

Query: 378 --CTQRGMTM 385
              T++GM++
Sbjct: 351 FYFTKKGMSL 360


>gi|123966705|ref|YP_001011786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9515]
 gi|123201071|gb|ABM72679.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9515]
          Length = 407

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 202/397 (50%), Gaps = 29/397 (7%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
            YVH PFC ++C YCDF      +++        N ++ +LT + + +  +     +S+I
Sbjct: 8   AYVHIPFCHRRCFYCDFAVVPLGNNIESLNGYGSNTVKEYLTYLDKEILSIKHKTPLSTI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS+++P  I  +++   +N+ +    EIT+E +P+S    +  G+ KAG+NR S
Sbjct: 68  YFGGGTPSILDPIQIEHLINLFKENYRIDYGAEITMEVDPASFNEGDLHGFIKAGINRFS 127

Query: 135 LGVQSLEEQSLRFLGRNH---NASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEM 189
           LG QS   Q L   GR H   +  ++ + +  A +  +    S DLI  LP     +W+ 
Sbjct: 128 LGAQSFNNQILDQAGRRHCGEDVEKSCSWLKRAHDYGLIKSWSLDLIQNLPSSGFKEWQE 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+++L +   H+S+Y L+IE GT+F K+   G L LP+++ +     LT  I  A G  
Sbjct: 188 DLEKSLKFCPPHISIYDLSIENGTVFKKLVDLGKLSLPNDDESFKNSELTHFILKASGYS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G +S HN  YW    +   G G+ S    G       I K  + W   V 
Sbjct: 248 RYEISNYALPGHQSRHNRVYWTGLGWWSFGQGSTSS-PWGEKFTRPRISKDYKKW---VA 303

Query: 310 KNGHAVVEKEFLSSE---QQADEFLMMGLRLREGISV------KDWEM----LAGRNLDI 356
           +     +E    + E   ++ DE +M+G+RL+EG+++       +W+     +A + L  
Sbjct: 304 EQCEIKLETSLENKENIYKELDEKIMLGMRLKEGVNIYKLINEHNWDKKKSEIALKKLLK 363

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E ER L+    I+R     L    +GM + + ++ ++
Sbjct: 364 EWERFLESGLLIKRGNRFFL-SDPKGMELSNQILVSM 399


>gi|148241697|ref|YP_001226854.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. RCC307]
 gi|147850007|emb|CAK27501.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. RCC307]
          Length = 410

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 198/393 (50%), Gaps = 33/393 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLT----GPRSISSIF 75
           +Y+H PFC ++C YCDF   V        +  QS    + W+ R L     GP  +S+++
Sbjct: 13  LYLHIPFCHRRCFYCDFPV-VPLGDQADGSRSQSIADYLHWLLRDLAAAPAGP-PLSTVY 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++ P  +A +L  +  +W ++   E+T+E +P+S +    +     G+NR+SL
Sbjct: 71  IGGGTPSMLSPDQLAQLLAAVRSHWGLAPGAELTLEMDPASFDRQRLEAVLALGINRVSL 130

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-----NIFPRMSFDLIYALPKQTMTQWEME 190
           G QS ++  L  LGR H A++   A    R      +    S DLI  LP+Q+   W+ E
Sbjct: 131 GGQSFDDAVLEQLGRRHRANQLREACSWLRQAQQQTLLQSWSLDLIVNLPQQSFEAWDWE 190

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+ A  HLS+Y L +E GT+F      G+L+LP ++ A D    T     A G   
Sbjct: 191 LSQALAQAPPHLSIYDLIVEPGTVFAWRQGRGELLLPDDDQAADRLQHTHQRLQAAGYGH 250

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES-WLKM-V 308
           YE+S+ +  G  S HN  YW    +  +G GA S   VG+ R+A    +   S W++   
Sbjct: 251 YEVSSWALPGQASRHNRVYWSGASWWALGLGATS--GVGTERLARPRTRDAYSEWVQADA 308

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN-LQR--Q 365
            + G         +     ++ L++GLR REG+ +  W    G       ER  L+R   
Sbjct: 309 GRQGDGPA-----AGWPPVEDLLLVGLRRREGVDLA-WLHQTGLG---GLERAWLERVLA 359

Query: 366 GFIER--VQFS--RLR-CTQRGMTMLDSVIANL 393
           G+IER  V+ S  RLR     G ++ ++V+++L
Sbjct: 360 GWIERGVVELSAQRLRLVAPEGFSLSNAVLSDL 392


>gi|226357315|ref|YP_002787055.1| coproporphyrinogen dehydrogenase [Deinococcus deserti VCD115]
 gi|226319305|gb|ACO47301.1| putative Coproporphyrinogen dehydrogenase (Oxygen-independent
           coproporphyrinogen-III oxidase) [Deinococcus deserti
           VCD115]
          Length = 390

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 195/388 (50%), Gaps = 29/388 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC   CPYCDF+   RR  +  E ++     E  W+   T    + +++ GGGT
Sbjct: 14  LYVHVPFCPSICPYCDFHVLTRRAGL-VEAYLHRLEQEAAWLSG-TYALDLDTVYVGGGT 71

Query: 81  PSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           PS +  + I  +   + ++  W     +E T+E NP +V       +R  G +R S+GVQ
Sbjct: 72  PSFLRDEEIRALATTVRRHLGW---GKLENTLEINPGTVSPGRAAHWRDLGFDRASVGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL + +LRFLGR H+A++A  A+        R+S DLI A+P Q +   + +++  +   
Sbjct: 129 SLHDPTLRFLGRQHDAAQAREAVTTLVGSGFRVSGDLITAVPGQPL---DSDIRGLVDLG 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LTIE GT F +  +  ++    E +    +  T+ + +A G   YE+SN++ 
Sbjct: 186 VGHVSAYTLTIEPGTEFAR--RGVNVTEDDERLG---FERTEQLLTALGFGRYEVSNYAR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGA---HSRVKVGSHRVAISIEKHPESWLKMVRKNGH-- 313
            G ES HN  YW    Y+G+GPGA   +  V  G   + +         L   R N H  
Sbjct: 241 PGQESRHNQAYWHGRTYLGLGPGAAGHYPAVGKGGLPLPVPGSAVSSPVLTTRRTNPHLH 300

Query: 314 -----AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--- 365
                A  E + + + +   + L MGLRLREG+++ D    AG ++  E    ++RQ   
Sbjct: 301 EWLQDAGGEVQPIDATEYVTDALFMGLRLREGVNLTDLSRRAGMDVAQEYAAVIRRQVSR 360

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G + R   + LR T +G  +L+ V++  
Sbjct: 361 GLLVR-DGALLRATPQGWWVLNQVVSEF 387


>gi|29840180|ref|NP_829286.1| coproporphyrinogen III oxidase [Chlamydophila caviae GPIC]
 gi|29834528|gb|AAP05164.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Chlamydophila caviae GPIC]
          Length = 375

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 181/336 (53%), Gaps = 16/336 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H+PFC KKC YC F + +         +  + L E +  +  +     I +
Sbjct: 3   GKQPLALYIHFPFCSKKCHYCSFYT-IPYNPESVSLYCNAVLQEGLNKLAAIKDTHFIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSLI P ++  I+  +A +       EIT+EANP  +  +  +      +NRI
Sbjct: 62  VFFGGGTPSLIPPHHLHNIITLLAPHAQ-----EITLEANPEDLSESYLRDLTLTPINRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H+AS ++ A+H    + F  +S DLIY LP Q++  +  +L 
Sbjct: 117 SIGVQTFHDPILKALGRIHSASTSMDAVHRCYEHEFHNISIDLIYGLPTQSLADFLADLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LT++  T FYK  +     + ++++   +    + + S+ G   YE
Sbjct: 177 QALTLPIAHISLYNLTLDPHTSFYKHRRILTPSIANDDILAAMSLSAEELLSSRGFSRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVA-ISIEKHPESWLKMVRK 310
           +++++   A+S HNL YW    ++G+G  A   + KV S  ++ IS       +L+ VRK
Sbjct: 237 LASYAKSQAQSKHNLYYWTDKPFLGLGVSASQYIDKVRSKNLSRIS------QYLRAVRK 290

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           N       E L  +++  E L + LRL +G  +KD+
Sbjct: 291 NLPTHESTECLPEKERIKEALALRLRLTKGAKIKDF 326


>gi|218961943|ref|YP_001741718.1| putative oxygen-independent coproporphyrinogen III oxidase
           (hemN-like) [Candidatus Cloacamonas acidaminovorans]
 gi|167730600|emb|CAO81512.1| putative oxygen-independent coproporphyrinogen III oxidase
           (hemN-like) [Candidatus Cloacamonas acidaminovorans]
          Length = 374

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 200/385 (51%), Gaps = 22/385 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           S+ LG+Y+H PFC+ +C YC F +   R  V  E ++     E   ++ +L  P  +++I
Sbjct: 7   SSPLGLYIHIPFCLSRCGYCSFFNVPYRNSVLNE-YVDYLEKEKSLYLNKLNRP--LATI 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+  + I  IL G+     +    EIT+E NP  +     Q  +   +NR+S
Sbjct: 64  YFGGGTPSLLNAEQIRHILSGL----NMLPEAEITLEINPLQITPTYLQALKTTPINRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS+ ++ L FL R+H   +    I L R+  +  +S DLIY LP  T+   +  +++
Sbjct: 120 IGLQSMNQEELNFLERHHKPEQIQEKIALCRHFGYENLSLDLIYGLPYSTLQTLQRTVEK 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    +H+S Y LT++      K+ K+ +  LP+E +  + Y    +     G   YEI
Sbjct: 180 YLELKPEHISCYLLTLDADC---KLAKEKN-NLPNEEIQAEQYAFLCNYLEKEGYIHYEI 235

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G  S HNL YW   DY+ +G  +   +    ++ +  +  + +S  K     G 
Sbjct: 236 SNFALPGYTSQHNLRYWHNDDYLALGASSAGWISPIRYQNSADLNLYYQSIEK-----GE 290

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLAGRNLDIECER--NLQRQGFIER 370
              +KE LS ++   ++LMMGLRL+EGI + + +     +  ++  ER   LQ+ G +  
Sbjct: 291 TFPQKEELSQQRIIQDYLMMGLRLKEGIGLDEFYNRFQVKLTELYGERILKLQQIGMLNL 350

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            + + L  T++ + + +SVI +L +
Sbjct: 351 TEHN-LELTEKALFVSNSVIGDLIL 374


>gi|209522746|ref|ZP_03271304.1| oxygen-independent coproporphyrinogen III oxidase [Arthrospira
           maxima CS-328]
 gi|209496795|gb|EDZ97092.1| oxygen-independent coproporphyrinogen III oxidase [Arthrospira
           maxima CS-328]
          Length = 434

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 171/347 (49%), Gaps = 30/347 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV---RRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF   V   RR+       E ++    +E+   R    P  + +
Sbjct: 14  AAYVHIPFCRRRCYYCDFAVSVVGDRRHGENSGMMEEYVDFLRSEILNQRHFGPP--LKT 71

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+  Q    ++  I+ N  ++S+ EI++E +P + ++   QG+  AG NR+
Sbjct: 72  VFFGGGTPSLLSVQQFDRLIKTISDNLGIASDAEISVEMDPGTFDLGKLQGFVAAGANRV 131

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ ++  LR  GR+H  ++   AI L   +     S DLI  LP QT    +  L 
Sbjct: 132 SVGVQAFQDDLLRLCGRSHTVADIWRAIDLINQVGVVNFSIDLISGLPHQTPEMMQESLD 191

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS    H+S Y L +E  T F + +K G+  LP +    +LY   Q   ++   H YE
Sbjct: 192 QVLSINPAHVSHYDLIVEPQTAFGRYYKPGEFPLPDDQTTANLYRQAQKCLTSRFKH-YE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G E  HNL YW    Y G G GA S   VG +R  ++  +  + + + ++ +G
Sbjct: 251 ISNYARPGFECRHNLVYWHNQPYYGFGMGAAS--YVGGYR--LTRPRTRDRYYQWLQSSG 306

Query: 313 HAVVEKEFLSSEQQAD----------------EFLMMGLRLREGISV 343
                 +   S   A                 E LM+GLRL  G+ +
Sbjct: 307 GVSESLQVFHSADLAPAPTEAIAIILGSDILLETLMLGLRLASGVDL 353


>gi|330801736|ref|XP_003288880.1| hypothetical protein DICPUDRAFT_153168 [Dictyostelium purpureum]
 gi|325081073|gb|EGC34603.1| hypothetical protein DICPUDRAFT_153168 [Dictyostelium purpureum]
          Length = 1383

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 181/356 (50%), Gaps = 74/356 (20%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNN-FQGY 125
           R I+SI+FGGGTPSL +       ++ + K +      ++EIT+E NP   ++ +  + +
Sbjct: 26  RPINSIYFGGGTPSLAKISTFVETMETMRKMFPSLTIEDIEITLEVNPDQKDLKSMLKDF 85

Query: 126 RK-AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL-PKQT 183
           ++  GVNR+SLG+QS  ++ L++LGR H   +A  ++ +A+ +F  ++FDLIYA   KQT
Sbjct: 86  KQFVGVNRVSLGIQSFIDEDLKYLGRTHTGKQAAESLKIAQELFDNVTFDLIYARHQKQT 145

Query: 184 MTQWEMELQRA--LSYAVDHLSLYQLTIEKGTLFYK--------MHKDGDLVLPSENVAV 233
              W  EL+ A  L++   H+SLY LT E+GT F+K         HK  +L       A 
Sbjct: 146 RESWRNELKDALYLTHGQGHISLYCLTFEEGTSFHKRLNMKRSSRHKINEL---DHETAG 202

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
           DLY +T   T+ HG + YE+SN  F  +E   S HNLNYWR GDYIGIGPG+ SR+ + +
Sbjct: 203 DLYEITLEETNKHGFNQYEVSN--FTSSESQKSKHNLNYWRGGDYIGIGPGSSSRISIIN 260

Query: 291 -------------------------------HRVAISIEKHPESWLKMVRKNG------- 312
                                          +R +     HP+ W+K +  +        
Sbjct: 261 ENNNNNNNNNNNNNNNNNNNNNNNNNNSSLINRYSTKNILHPKDWMKELLDSSTTNNDGI 320

Query: 313 ------------HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLD 355
                       +A +E + LS+   A+E L+MGLR  EG+    + +L  G  LD
Sbjct: 321 INNPKPKESILKNAFLENQLLSNTDVANELLLMGLRTEEGVQNSTFSLLTNGLTLD 376


>gi|260773607|ref|ZP_05882523.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
 gi|260612746|gb|EEX37949.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
          Length = 306

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 159/315 (50%), Gaps = 30/315 (9%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           ++DGIA        +EIT+EANP ++E   F  YR AGV RIS+GVQS   + L  LGR 
Sbjct: 1   MIDGIAARIPFQPEIEITMEANPGTIEAERFAAYRIAGVTRISIGVQSFAAEKLAHLGRI 60

Query: 152 HNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
           H   EA+ A  LA  I     + DL++ LP Q++ Q   +L +A++    HLS YQLTIE
Sbjct: 61  HGQQEAVRAAKLAHTIGLKSFNLDLMHGLPDQSLAQALDDLDQAITLNPPHLSWYQLTIE 120

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW 270
             TLFY         LP ++   D++ L     +  G   YEIS +S  G +  HNLNYW
Sbjct: 121 PNTLFYSKPP----TLPDDDALWDIFELGHQKLTEAGYVQYEISGYSKPGYQCQHNLNYW 176

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQ---Q 326
           R+GDY+GIG GAH ++     R+  + + KHP  +L   +      + K +LS EQ   +
Sbjct: 177 RFGDYLGIGCGAHGKLSFADGRIIRTTKIKHPRGYLAAYQN-----MVKPYLSDEQLVAE 231

Query: 327 AD---EFLMMGLRLREGISVKDWEMLAGRNLDI-------ECERNLQRQGFIERVQFSRL 376
           +D   EF M   RL E    +D+    G  L +        CE N   Q        +  
Sbjct: 232 SDRPFEFFMNRFRLLEACPKQDFITTTGLALSVIEPTIQWACEMNYLTQ------DATSW 285

Query: 377 RCTQRGMTMLDSVIA 391
           + T+ G   L+ ++A
Sbjct: 286 QITEHGKLFLNDLLA 300


>gi|260886569|ref|ZP_05897832.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas sputigena ATCC 35185]
 gi|260863712|gb|EEX78212.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas sputigena ATCC 35185]
          Length = 354

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 172/326 (52%), Gaps = 10/326 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++ +++ GGGTP+ +   ++  ++  + +++ ++   E T+EANP +V+    +  R+AG
Sbjct: 24  AVRTVYIGGGTPTALAADDLLAVICSVRESFHLTGAEEFTVEANPGTVDAKLLERLREAG 83

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+S GVQS  +  L  +GR H A EA  A+ +A+    R+S DL+Y LP QT++  + 
Sbjct: 84  VNRLSFGVQSFSDALLAAIGRIHTAREAEDAVRMAQKAGFRVSLDLMYGLPGQTLSDLKD 143

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            + RA +  + H+S+Y L +E GT F +M + G L LP+++   D+Y+   +     G  
Sbjct: 144 SVARAAALGIGHISVYGLAVEDGTPFARMEEAGRLHLPTDDKCGDMYDYITAELPRLGYR 203

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G ES HNL YW+   YIG+G  AHS      H      E+    ++  + 
Sbjct: 204 RYEISNYARAGEESRHNLAYWQDVSYIGLGAAAHSYW----HGQRTENEQDLCRYIACIE 259

Query: 310 KNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQR 364
             G   +  E+E  S E   +EF  + LR  +GI  K +      ++     E    LQ 
Sbjct: 260 GEGGLSLAREEEPCSRESHIEEFAFLALRTADGIDKKRFRGTFASDVHEVYGEVIARLQA 319

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVI 390
            G +E    S +R T++GM   + V 
Sbjct: 320 AGLVEETAVS-IRLTEQGMKFGNRVF 344


>gi|15609525|ref|NP_216904.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Rv]
 gi|148662221|ref|YP_001283744.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Ra]
 gi|289443910|ref|ZP_06433654.1| oxygen-independent coproporphyrinogen III oxidase [Mycobacterium
           tuberculosis T46]
 gi|289570534|ref|ZP_06450761.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T17]
 gi|289575081|ref|ZP_06455308.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis K85]
 gi|289750990|ref|ZP_06510368.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T92]
 gi|289754493|ref|ZP_06513871.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis EAS054]
 gi|289758514|ref|ZP_06517892.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T85]
 gi|289762554|ref|ZP_06521932.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis GM 1503]
 gi|298525869|ref|ZP_07013278.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis
           94_M4241A]
 gi|2493813|sp|P71756|HEMN_MYCTU RecName: Full=Probable oxygen-independent coproporphyrinogen-III
           oxidase; Short=Coprogen oxidase;
           Short=Coproporphyrinogenase
 gi|1655672|emb|CAB03737.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE HEMN
           (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|148506373|gb|ABQ74182.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Ra]
 gi|289416829|gb|EFD14069.1| oxygen-independent coproporphyrinogen III oxidase [Mycobacterium
           tuberculosis T46]
 gi|289539512|gb|EFD44090.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis K85]
 gi|289544288|gb|EFD47936.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T17]
 gi|289691577|gb|EFD59006.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T92]
 gi|289695080|gb|EFD62509.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis EAS054]
 gi|289710060|gb|EFD74076.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis GM 1503]
 gi|289714078|gb|EFD78090.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T85]
 gi|298495663|gb|EFI30957.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis
           94_M4241A]
 gi|326904004|gb|EGE50937.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis W-148]
          Length = 375

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 20/388 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++   +   V  + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 118 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 178 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 237

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 238 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGV----TRWWNVKHPNTYAEI 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQ 365
           +      V   E L ++    E +++ +RLR+G+ +        R    E ER   +   
Sbjct: 294 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLA-------RLGAAERERAEAVLAD 346

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G ++     RL  T RG  + D+V+  L
Sbjct: 347 GLLD-YHGDRLVLTGRGRLLADAVVRTL 373


>gi|289553823|ref|ZP_06443033.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 605]
 gi|289438455|gb|EFD20948.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 605]
          Length = 381

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 20/388 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++   +   V  + ++ +   E++        
Sbjct: 7   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 63

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 64  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 123

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 124 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 183

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 184 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 243

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 244 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGV----TRWWNVKHPNTYAEI 299

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQ 365
           +      V   E L ++    E +++ +RLR+G+ +        R    E ER   +   
Sbjct: 300 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLA-------RLGAAERERAEAVLAD 352

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G ++     RL  T RG  + D+V+  L
Sbjct: 353 GLLD-YHGDRLVLTGRGRLLADAVVRTL 379


>gi|315922434|ref|ZP_07918674.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
 gi|313696309|gb|EFS33144.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
          Length = 335

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 10/328 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +++FGGGTPS +E ++   I D I  ++ +S   EIT+EANP  +     +      
Sbjct: 10  DIETVYFGGGTPSQLEKEDFEQIFDTIRTHYGLSHCQEITLEANPDDLTSEYLKMLSSLP 69

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NRIS+G+Q+ ++ +L+ L R HNA  AI A+H  R   F  +S DLIY LP +T  +WE
Sbjct: 70  FNRISMGIQTFDDPTLKLLKRRHNAHTAIEAVHRCREAGFQNISIDLIYGLPGETKERWE 129

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ ++D + L        G 
Sbjct: 130 NDLRQAVSLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTLLIEHLQKAGF 189

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS   +       SI    ++++K +
Sbjct: 190 EHYEISNFCRPGKYSRHNSSYWKGIPYLGCGPSAHSFDGMTREWNVSSI----DTYIKGI 245

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQ 365
            +N  A  E E+L    + +EF++  +R   G  ++  + + G  +   C+R      + 
Sbjct: 246 EENSRA-FEIEYLDQTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQRMAAPYLKN 304

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +E      LR T+ G+ + DS++++L
Sbjct: 305 GKLEEHD-GALRLTREGIFISDSIMSDL 331


>gi|78212387|ref|YP_381166.1| coproporphyrinogen III oxidase, anaerobic [Synechococcus sp.
           CC9605]
 gi|78196846|gb|ABB34611.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CC9605]
          Length = 394

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 181/364 (49%), Gaps = 34/364 (9%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQL----TGPRSI 71
            Y+H PFC ++C YCDF         R         I+ +L+ +   R++    +GP  +
Sbjct: 10  AYLHIPFCHRRCYYCDFAVVPLGDQARADNGPGSRSIREYLSLLH--REIASAPSGP-PL 66

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+++ GGGTPSL+ P  I  +LD +   + +    EIT+E +P++ +          GVN
Sbjct: 67  STVYVGGGTPSLLCPDQIGDLLDALTNKFGLQPGAEITLEMDPATFDAAQLASVLAHGVN 126

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQTMTQ 186
           RISLG QS ++  L  LGR H  S+  AAI      +        S DLI  LP QT+T 
Sbjct: 127 RISLGGQSFDDAVLEQLGRRHRLSDLHAAIDWLVQAWRDGALISWSLDLIQNLPGQTLTG 186

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L +A++    HLS+Y L++E GT+F +    G L LP +++A  L   T    +A 
Sbjct: 187 WDAQLDQAIASQAPHLSIYDLSVEPGTVFDRQRSLGLLKLPEDDLAFALMERTTQRLAAA 246

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YEISNH+  G  S HN  YW    + G G GA S        V ++  +   ++ +
Sbjct: 247 GLSRYEISNHARPGHASRHNRVYWSGAGWWGFGMGATS----APWGVRLARPRTRAAYAE 302

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +    H  + +  L      D+ L++GLR REG++++      G + D    R    Q 
Sbjct: 303 WLDHPSHESIAEAGLP----LDDRLLVGLRRREGVTLQ------GLDADALVRR---WQP 349

Query: 367 FIER 370
           F+ER
Sbjct: 350 FVER 353


>gi|297622635|ref|YP_003704069.1| oxygen-independent coproporphyrinogen III oxidase [Truepera
           radiovictrix DSM 17093]
 gi|297163815|gb|ADI13526.1| oxygen-independent coproporphyrinogen III oxidase [Truepera
           radiovictrix DSM 17093]
          Length = 380

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 185/385 (48%), Gaps = 36/385 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTG--PRSISSIFFG 77
           +Y+H PFC K CPYCDF+  +RR+    E  + ++L  +Q   R L    P  + +++FG
Sbjct: 8   LYLHVPFCPKVCPYCDFHK-MRRH----EGLVAAYLERLQGEARALYAAFPGPLDTLYFG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +    +A +   +   W   + +E T+EA+P + +    + +R  G +R+S+GV
Sbjct: 63  GGTPSHLTDDELAHLTRTLEATWGFPAALETTLEADPKTFDRGRLETFRALGFDRLSIGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L FLGR H   E + A+ +A      +S DLI A+P Q        L +    
Sbjct: 123 QSTQDAVLAFLGRQHTGREGLEAVEMALAAGFTVSADLITAVPGQDAAADLHALAQT--- 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS+Y LTIE  T F +     D     E+   + Y L   +  A+GL  YE+S+H+
Sbjct: 180 GVAHLSVYTLTIEPYTPFARRGVTVD-----EDKEAEDYALASEVLGAYGLVRYEVSSHA 234

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------GSHRVAISIEKHPESWLKMVRKN 311
             G E+ HN  YWR   ++ +GP A + V V      G  R    I    ++WL      
Sbjct: 235 RPGFEAKHNSVYWRGDPFLALGPAAAAFVPVSHGGLLGERRTNPPI----KAWLA----- 285

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFI 368
             A  E   + S     + LM GLR   G+ +      AG ++    +     L+R G +
Sbjct: 286 -GAPPEVLPVGSAAYVQDVLMTGLRTARGLDLAALSARAGFDVAAHYQGVLARLERVGLL 344

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
           ER     LR T+ G+  L+ V   L
Sbjct: 345 ERAG-GFLRATEAGLLQLNGVTRAL 368


>gi|145340617|ref|XP_001415418.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575641|gb|ABO93710.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 408

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 21/287 (7%)

Query: 21  VYVHWPFCVKKCPYCDF---------------NSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            YVH PFC  +C YCDF               ++ +RRY       + +    M+    L
Sbjct: 4   AYVHLPFCRSRCYYCDFAISVVGRAGETRPDVDAAMRRYGAATRAEVAATARAMRANGAL 63

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                + ++FFGGGTPSL+    I  IL  + + + ++++ E++ E +P + +    + +
Sbjct: 64  DASAPLETVFFGGGTPSLMPADEIKAILGSLREAFGLAADAEVSAEMDPGTFDEEKLRAF 123

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTM 184
             AGVNR+SLGVQS ++  L+  GR+H+A  A  AI  L R   PR S DLI  LP    
Sbjct: 124 LAAGVNRVSLGVQSFDDGVLQRAGRSHDARAAEEAIDTLRRCGVPRWSADLISGLPGVDA 183

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH-----KDGDLVLPSENVAVDLYNLT 239
             W   L+R +    DH+S+Y L +E+GT FY+ +     KD    LPSE+ +  ++   
Sbjct: 184 KTWRTSLERVIEAGADHVSVYDLQVERGTAFYRWYGENAGKDKKEGLPSEDASAAMFRDA 243

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
            +   A G   YE+S+++  GA   HN  YW    + G G  A S V
Sbjct: 244 SATLGAAGYEHYEVSSYAKPGARCKHNQIYWENAGWYGFGLSATSHV 290


>gi|162447538|ref|YP_001620670.1| oxygen-independent coproporphyrinogen III oxidase [Acholeplasma
           laidlawii PG-8A]
 gi|161985645|gb|ABX81294.1| oxygen-independent coproporphyrinogen III oxidase [Acholeplasma
           laidlawii PG-8A]
          Length = 363

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 169/331 (51%), Gaps = 21/331 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFG 77
           G+Y+H PFC   C YCDF   V +     +N I  +L ++  + M   +   SI +IF G
Sbjct: 3   GLYIHIPFCEYICHYCDFVKRVPK----NQNMIDQYLIKLREEIMTYESHFDSIETIFVG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++    +  + D + +       VE +IE NP S        ++K G+NRIS+GV
Sbjct: 59  GGTPSMLTVDQLTYLFDSLVR----IKPVEFSIELNPESYTHEKGLVFKKYGINRISMGV 114

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L +L R H   +  + I   +++  P +S DLI+A+P QT+   + +L++ L 
Sbjct: 115 QSFDDKILAYLNRGHKTEQVFSIIKDLKDLGIPYISIDLIFAIPGQTLDHIKYDLEQFLK 174

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+S Y L +E  T FY  +  G+     E+    +Y    +  + HG   YEISN+
Sbjct: 175 LDITHISYYSLILEDKTYFYHQYLKGNFKPMDEDNEAIMYEYVMNFLTNHGYDQYEISNY 234

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     SLHN  YW  G+YIG+G GAH  +   ++R          +   M +   H + 
Sbjct: 235 AKNNHYSLHNNIYWTLGEYIGVGLGAHGFID--NYRTY--------NERGMGQYMDHFLK 284

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           EK   + + +  + L+ GLRL +G+ +   E
Sbjct: 285 EKTLQTEDLKLQDELIFGLRLTKGVYIPRLE 315


>gi|307565294|ref|ZP_07627787.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella amnii CRIS 21A-A]
 gi|307345963|gb|EFN91307.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella amnii CRIS 21A-A]
          Length = 381

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 172/342 (50%), Gaps = 24/342 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-------HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G+Y+H PFC  +C YC F S        +   K  ++ +I +   EM   + +     ++
Sbjct: 3   GLYIHIPFCESRCIYCGFYSSLTQNVNKIEHGKTIRQRYINAVCKEMSKHKAI-----LN 57

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV------EITIEANPSSVEVNNFQGYR 126
           +I+ GGGTPS + P+ +  I + I K +     V      EITIE NP  V  N  Q   
Sbjct: 58  TIYLGGGTPSQLSPEELNQIFNQINKTFLQQPEVRPSLPKEITIECNPEDVTPNFVQALS 117

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
              VNRIS+GVQ+  ++ L+F+ R H++++ + A+ L RNI    +S DL++  PKQT  
Sbjct: 118 TLPVNRISMGVQTFNDERLKFIHRRHSSNKILEAVRLLRNIGINNISIDLMFGFPKQTQE 177

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +W  ++++A+S  V+H+S Y L  E+GT  Y M K   +    E    ++Y         
Sbjct: 178 EWIDDIKKAISLNVEHISAYSLMYEEGTPLYAMLKHHKITQIGEEQYRNMYEELIDRLEI 237

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN +  G  SLHN +YW    YIG+G  AHS            I K    ++
Sbjct: 238 AGYEQYEISNFAKHGFRSLHNSSYWHNVPYIGVGAAAHSYNLRCRRWNYADINK----YV 293

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             +  + HA  E+E +      ++ ++  LR +EG+++  ++
Sbjct: 294 NAIEHDYHA-YEEEIIDDNTHYNDSIVTALRTKEGLNIDGFD 334


>gi|299140850|ref|ZP_07033988.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
 gi|298577816|gb|EFI49684.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
          Length = 384

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 181/341 (53%), Gaps = 17/341 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPR-----SIS 72
           G+Y+H PFC  +C YC F S  +  +   + ++     EM  +RQ  +TG +     +I+
Sbjct: 3   GLYIHIPFCASRCIYCGFYSTTQ--QSLHQQYVDMLCHEMD-LRQTEITGEQADTENTIT 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVN 131
           +I+ GGGTPS++    +  IL  I K W    ++ E+TIE NP  +            VN
Sbjct: 60  TIYLGGGTPSMLSGNQLEQILLYIYKVWGKHIDLRELTIECNPDDMTEAFAARLATLNVN 119

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G Q+     LRFL R HN  E + A++  R++    +S DL++  P++TM +W+ +
Sbjct: 120 RVSMGAQTFNNNRLRFLHRRHNREEIMQAVNYLRHVGIKNISIDLMFGFPEETMEEWQTD 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ A+   V+H+S Y L  E+GT  + M ++  +    E  ++ +Y +  ++ +  G   
Sbjct: 180 LQEAIKLNVEHISAYSLMYEEGTPLFHMKQEKKIKDIDEETSLAMYEMLINLLTKAGYEH 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G  SLHN +YW    YIG+G  AHS    G+ +  IS   + ++++  +  
Sbjct: 240 YEISNFARPGYRSLHNSSYWHEVPYIGLGASAHS-YGHGTRKWNIS---NIKTYMNSIAC 295

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           N     E E L+   Q ++ +   LR REGI++ +++   G
Sbjct: 296 N-RLPYEIEILNQNMQYNDLITTALRTREGINLTNFKRKYG 335


>gi|304389946|ref|ZP_07371903.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326839|gb|EFL94080.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 475

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 157/349 (44%), Gaps = 46/349 (13%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEM----------------- 59
           +L  YVH P+C+++C YCDFN++       G   +  + L E+                 
Sbjct: 6   TLSAYVHVPYCLRRCGYCDFNTYSNLSLGPGVGGYAAALLREIGLYAPDCSVSVAVCPDG 65

Query: 60  --------------------QWMRQLTGPR----SISSIFFGGGTPSLIEPQNIALILDG 95
                               Q      G R    +++S+FFGGGTP+++   ++  +L G
Sbjct: 66  GHKGGGHEGGAGGAGASAGRQDGSHKGGGRQDSRALTSVFFGGGTPTVLPATDLVRVLRG 125

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
           +++ + +    EIT EANP +V     +     G  R+S G+QS     L  L R H   
Sbjct: 126 LSETFGLVPGAEITTEANPDTVTPQYLEALAAGGFTRVSFGMQSAVPAVLATLNRTHQQK 185

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
             +A +  A +    +S DLIY  P +++  W   L  AL    DH+S Y L IE GT  
Sbjct: 186 HLVAGVQAAHSRGLEVSVDLIYGTPGESLADWRASLDAALELGADHVSCYALVIEPGTAL 245

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
            +    GD+     +   D Y L     SA GL  YEISN +  G E  HNL YWR  D+
Sbjct: 246 GRALAQGDIPPVDPDDQADKYELADETLSAAGLQWYEISNWARPGHECRHNLAYWRDQDW 305

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
            G GPGAHS   +GS R      +HP  W++ ++     V  +E ++ E
Sbjct: 306 YGFGPGAHSH--LGSTR--FWNLRHPAKWMQSLQAGYRPVDGREIVTGE 350


>gi|15841901|ref|NP_336938.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis CDC1551]
 gi|148823590|ref|YP_001288344.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis F11]
 gi|167968733|ref|ZP_02551010.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Ra]
 gi|215404314|ref|ZP_03416495.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis 02_1987]
 gi|215412137|ref|ZP_03420901.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427766|ref|ZP_03425685.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T92]
 gi|215431329|ref|ZP_03429248.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis EAS054]
 gi|215446630|ref|ZP_03433382.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T85]
 gi|218754116|ref|ZP_03532912.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis GM 1503]
 gi|219558381|ref|ZP_03537457.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T17]
 gi|253798535|ref|YP_003031536.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232525|ref|ZP_04925852.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis C]
 gi|254365163|ref|ZP_04981209.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551436|ref|ZP_05141883.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201513|ref|ZP_05769004.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T46]
 gi|260205690|ref|ZP_05773181.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis K85]
 gi|289746166|ref|ZP_06505544.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis 02_1987]
 gi|294994505|ref|ZP_06800196.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis 210]
 gi|297634990|ref|ZP_06952770.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis KZN
           4207]
 gi|297731983|ref|ZP_06961101.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis KZN
           R506]
 gi|306776654|ref|ZP_07414991.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu001]
 gi|306785177|ref|ZP_07423499.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu003]
 gi|306789538|ref|ZP_07427860.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu004]
 gi|306793863|ref|ZP_07432165.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu005]
 gi|306798259|ref|ZP_07436561.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu006]
 gi|306804136|ref|ZP_07440804.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu008]
 gi|306808707|ref|ZP_07445375.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu007]
 gi|306968537|ref|ZP_07481198.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu009]
 gi|306972766|ref|ZP_07485427.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu010]
 gi|307080471|ref|ZP_07489641.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu011]
 gi|313659317|ref|ZP_07816197.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis KZN
           V2475]
 gi|13882170|gb|AAK46752.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Mycobacterium tuberculosis CDC1551]
 gi|124601584|gb|EAY60594.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis C]
 gi|134150677|gb|EBA42722.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148722117|gb|ABR06742.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis F11]
 gi|253320038|gb|ACT24641.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 1435]
 gi|289686694|gb|EFD54182.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis 02_1987]
 gi|308214969|gb|EFO74368.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu001]
 gi|308330159|gb|EFP19010.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu003]
 gi|308333982|gb|EFP22833.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu004]
 gi|308337802|gb|EFP26653.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu005]
 gi|308341484|gb|EFP30335.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu006]
 gi|308344969|gb|EFP33820.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu007]
 gi|308349280|gb|EFP38131.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu008]
 gi|308353900|gb|EFP42751.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu009]
 gi|308357845|gb|EFP46696.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu010]
 gi|308361791|gb|EFP50642.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu011]
 gi|323719054|gb|EGB28202.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis CDC1551A]
 gi|328458303|gb|AEB03726.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 4207]
          Length = 390

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 20/388 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++   +   V  + ++ +   E++        
Sbjct: 16  MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 72

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 73  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 132

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 133 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 192

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 193 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 252

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 253 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTRWWNV----KHPNTYAEI 308

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQ 365
           +      V   E L ++    E +++ +RLR+G+ +        R    E ER   +   
Sbjct: 309 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLA-------RLGAAERERAEAVLAD 361

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G ++     RL  T RG  + D+V+  L
Sbjct: 362 GLLD-YHGDRLVLTGRGRLLADAVVRTL 388


>gi|33862590|ref|NP_894150.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9313]
 gi|33634506|emb|CAE20492.1| Oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 436

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 18/338 (5%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
            Y+H PFC ++C YCDF       H    K      IQS+L  +Q    L  P  +++++
Sbjct: 13  AYLHIPFCHRRCFYCDFAVVPLGDHANGAKGSGSASIQSYLQLLQREIALVKPGPTLATV 72

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+    I  +LD + + + V    EIT+E +P+S +    Q    AGVNR+S
Sbjct: 73  YIGGGTPSLLSSAQIGALLDQLRQRFGVQLGAEITLEMDPASFDQAYLQAVLAAGVNRVS 132

Query: 135 LGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEM 189
           LG QS ++  L  LGR H      EA   +H A         S DLI  LP Q +  W+ 
Sbjct: 133 LGGQSFDDAVLETLGRRHRRHHLLEACGWLHQAHQCGELKSWSLDLIQNLPGQELVAWKQ 192

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L  A+     HLS+Y L++E GT+F    + G+L LP  ++A +    T  +    G  
Sbjct: 193 QLVEAIDTGSPHLSIYDLSVEPGTVFAWRQRRGELDLPDNDLAAEQMQTTSVLLRQEGFG 252

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G  S HN  YW    +   G GA S    G             +W+++  
Sbjct: 253 RYEISNYALPGHASRHNRVYWSGAGWWAFGQGATS-APWGERLARPRTRDGYCNWIEVQE 311

Query: 310 KNGHAVVEKEFLSSEQQA---DEFLMMGLRLREGISVK 344
             G   ++   ++++ +    DE L++GLR REG+ ++
Sbjct: 312 AEG---LDSSLVAAQARPLPLDERLLVGLRCREGVDLE 346


>gi|289448030|ref|ZP_06437774.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis CPHL_A]
 gi|289420988|gb|EFD18189.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis CPHL_A]
          Length = 375

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 20/388 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++   +   V  + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 118 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 178 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 237

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 238 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGV----TRWWNVKHPNTYAEI 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQ 365
           +      V   E L ++    E +++ +RLR+G+          R    E ER   +   
Sbjct: 294 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPFA-------RLGAAERERAEAVLAD 346

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G ++     RL  T RG  + D+V+  L
Sbjct: 347 GLLD-YHGDRLVLTGRGRLLADAVVRTL 373


>gi|116515278|ref|YP_802907.1| YggW [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116257132|gb|ABJ90814.1| putative oxidase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 383

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 177/333 (53%), Gaps = 14/333 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H P+C+KKCPYCDF+S+ +  K+ ++ +I++   + +  ++    R I S+F GG
Sbjct: 12  ISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKISKRKILSVFIGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++  +I   +  I K    S   EITIE NP ++  N    Y   G+NR S+GVQ
Sbjct: 72  GTPSLLKLSSIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYNFGINRTSIGVQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           +L    L+ + R HN  + I  I     I  R ++ D+IY LP+Q++     +L+  +++
Sbjct: 132 TLNNNLLKKIERTHNKKKTIKLIKSTNKIKNRNLNIDIIYGLPEQSIQDSLNDLKIIINF 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L IE  T FY      ++ LPS      +  L + +    G   YEIS  S
Sbjct: 192 KPEHISWYLLDIEPNTPFY----TKNIKLPSLKKTRKMQKLGKELLIKSGYQQYEIS--S 245

Query: 258 FLGAES---LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           F   +    +HNLNYW +GDYIGIG GAH ++   +  +  +I+   +S     +     
Sbjct: 246 FARKKKYRCIHNLNYWNFGDYIGIGCGAHGKITKKNKDIVRTIKTKQDSQYIKKK----Y 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           + +K  +S +    EF +   RL + I  +D+E
Sbjct: 302 IQKKYIVSKKDIPFEFFLNKFRLLKPILHQDFE 334


>gi|24215263|ref|NP_712744.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24196353|gb|AAN49762.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 388

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 189/392 (48%), Gaps = 39/392 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--------- 69
           G+Y+H+P+C++KC YCDF      Y VG  +N I       Q  ++    R         
Sbjct: 16  GIYIHYPYCIQKCEYCDF------YSVGNGKNQIPDETGLFQRYKEEIATRISDNPFISD 69

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               +IFFGGGTPS  E   I+ ++  +  N   S   EIT+E NP  +  +  +   +A
Sbjct: 70  LEFDTIFFGGGTPSRAEVSKISDLIFFLRNNIKFSKYSEITMECNPEDITPDFLKSIEQA 129

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NRIS+G+QS   + L+FLGR ++       +   +N      S DLIY +P QT+ + 
Sbjct: 130 GINRISVGIQSFHPEKLQFLGRYYDPDRYENVLETVKNSGISNFSADLIYGIPGQTVQEI 189

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             ++Q+ LS    H+SLY LT+EKGT + +   D     P E +   +  L   + S + 
Sbjct: 190 LQDIQKVLSAGGKHISLYALTVEKGTEYSRKVMDKISPSPEEEIQEKILKLLPDLLSPYE 249

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L  YE+SN S  G  S HNL YW    Y+GIGPGAH  +  G +        +P +    
Sbjct: 250 LFQYEVSNFSKPGFFSKHNLKYWTMEYYLGIGPGAHGFLPSGRY-------SNPRNVDTY 302

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLA--GRNLDIECERNLQR 364
            RKN      KE+ +     +E ++   RL + I ++  +E++    + LD++ ++  Q 
Sbjct: 303 KRKN----FSKEY-TKPNFYEELILSLFRLFQPILMESFYELIPDQSQTLDLQLKK-FQE 356

Query: 365 QGFIERVQFSR--LRCTQRGMTMLDSVIANLA 394
            G  E   FS    +     +  LDS I  L 
Sbjct: 357 SGLCE---FSNGIFQWKPEAVLFLDSKILELT 385


>gi|189464021|ref|ZP_03012806.1| hypothetical protein BACINT_00356 [Bacteroides intestinalis DSM
           17393]
 gi|189438594|gb|EDV07579.1| hypothetical protein BACINT_00356 [Bacteroides intestinalis DSM
           17393]
          Length = 337

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 12/329 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++ +I+FGGGTPS +  ++   +   I + +      E+T+EANP  +     Q  R   
Sbjct: 12  AVETIYFGGGTPSQLSEEDFKEVFKTIEQVYGTRKATEVTLEANPDDLTEEYTQMLRTLP 71

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NRIS+G+Q+ ++ +LR L R HNA++AI A+   R   F  +S DLIY LP +T  +W 
Sbjct: 72  FNRISMGIQTFDDATLRLLNRRHNAAQAIEAVQRCRQAGFQNISIDLIYGLPGETGQRWA 131

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +LQ+A+S  V+H+S Y L  E+GT  YKM +   +    E+ +++ ++      SA G 
Sbjct: 132 QDLQQAVSLNVEHISAYHLIYEEGTPLYKMLQQHSVSQVDEDSSLNFFSTLIDTLSAAGY 191

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS           S+ ++  S     
Sbjct: 192 EHYEISNFCKPGMYSRHNTSYWQGIPYLGCGPSAHSFDGDSREWNVASLNQYLSS----- 246

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            + G  + E E L +  + +E+++ GLR   GIS ++ +   G  L   C    Q + ++
Sbjct: 247 VEQGQRLHETEQLDTRTRYNEYIITGLRTMWGISTEELKSKFGDRLWEYCSE--QAKPYL 304

Query: 369 E----RVQFSRLRCTQRGMTMLDSVIANL 393
           E    ++   RL+ T+ G+ + D ++++L
Sbjct: 305 ENGKLKLHNDRLKLTKEGIFVSDGIMSDL 333


>gi|260187392|ref|ZP_05764866.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis CPHL_A]
          Length = 390

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 20/388 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++   +   V  + ++ +   E++        
Sbjct: 16  MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 72

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 73  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 132

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 133 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 192

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 193 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 252

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 253 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTRWWNV----KHPNTYAEI 308

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQ 365
           +      V   E L ++    E +++ +RLR+G+          R    E ER   +   
Sbjct: 309 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPFA-------RLGAAERERAEAVLAD 361

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G ++     RL  T RG  + D+V+  L
Sbjct: 362 GLLD-YHGDRLVLTGRGRLLADAVVRTL 388


>gi|312889837|ref|ZP_07749383.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
 gi|311297763|gb|EFQ74886.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
          Length = 373

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 191/388 (49%), Gaps = 33/388 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC + C YCDF+ S   +YK    + +++   E++  +      +I +I+ GG
Sbjct: 3   GIYLHIPFCKQACHYCDFHFSTSLQYK---GDMLKALANEIRLQKDYLANETIETIYLGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++   +  ++D I ++ TV+S+ EITIEANP  ++    +  R+  VNR S+G+Q
Sbjct: 60  GTPSLLQGDEVNSLIDIITRHHTVASDAEITIEANPDDLDEQKVKALRQTPVNRFSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L ++ R H + EA +++   ++  F  ++ DLIY  P  T  +W+  L++    
Sbjct: 120 SFFDEDLFWMNRAHRSREAESSVKRVQDAGFSNITADLIYGYPLLTDQKWKHNLEQIFKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y +T+E  T      K       SE+ + D + +  +     G   YEISN  
Sbjct: 180 NIPHISAYSMTVEPKTALASFIKKKLFAPMSESQSADQFLVLLNEMGQQGYEQYEISNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSR---------VKVGSHRVAISIEKHPESWLKMV 308
             G  S HN NYW+   Y+GIGP AHS               +  A+S+   P       
Sbjct: 240 LPGHYSRHNSNYWKGVKYLGIGPSAHSFNGEARQWNIANNAKYIQALSLNSIP------- 292

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQ 365
                   E+E LS + + +E++M  LR   G+ ++  E +   +G  L ++       +
Sbjct: 293 -------AEREELSEKDRLNEYIMTSLRTIWGLDIQKLESISKYSGEQL-LKAAEEFFEK 344

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G+I R +   L  +  G    D + + L
Sbjct: 345 GWINRKE-QILTLSAEGKLYADHIASEL 371


>gi|182414600|ref|YP_001819666.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
 gi|177841814|gb|ACB76066.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
          Length = 395

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 195/382 (51%), Gaps = 15/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +LG+YVH PFC   C +C F    +      ++F++    E+     +T  R ++++F
Sbjct: 14  AAALGLYVHVPFCASTCDFCAFY-QTKPTAQAVKSFVEGVARELG---LVTWSRPVNTVF 69

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP L+  +++   L  + +     + VE ++E  P SV V      R+ GV RIS+
Sbjct: 70  WGGGTPGLLAARDLRR-LGLLVRERCGGTPVEWSVEMAPGSVTVERLAALREVGVTRISM 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +   L  LGR H+  +   A    R   F  ++ D+++ALP QT  +W+ +L+ A
Sbjct: 129 GVQSFQPALLDALGRQHSREQIYRAYDRVRAAGFASVNIDMMFALPGQTEAEWQNDLRAA 188

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DH+S Y LT E+ T  +     G + L  E+ A  LY  T +  +A G   YE+S
Sbjct: 189 LALEPDHISTYCLTFEEDTALWVKLSQGRVKLDLEHEA-RLYESTWAQLAAAGFAQYEVS 247

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G   LHNLN WR  ++ G+GP A S+ + G     I+       W + V ++   
Sbjct: 248 NFARPGHACLHNLNTWRMQEWAGVGPSAASQ-QDGWRGANIADLTR---WRENVDQSLRV 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQGFIERV 371
             ++  L+    A++ L+ GLR+ EG++++ W      A  N+ +     L   G  +  
Sbjct: 304 TEDRTALTPASLAEDALIFGLRMNEGVNLEVWRTRSPDAPWNVVMALVDRLVADGLAQ-C 362

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
           +  +LR T RG  + D+V A++
Sbjct: 363 EGPQLRLTNRGRLLADAVGADV 384


>gi|293400546|ref|ZP_06644691.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305572|gb|EFE46816.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 369

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 198/383 (51%), Gaps = 34/383 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDF     RY V      + +L  M     +     +++++ GGG
Sbjct: 4   AAYLHVPFCQDICAYCDFFR--CRYHV---ELAEKWLAAMAKELTIKKLSPLTTMYIGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++PQ +  +L  +   +T   N E TIEAN  S+        ++ GVNRISLGVQS
Sbjct: 59  TPSALQPQQLETLLSLLVP-YTKEVN-EYTIEANVESLTDEKLDICQRFGVNRISLGVQS 116

Query: 140 LEEQSLRFLGRNHNASEAIAAI-----HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           L+   L  + R+H + + +A I     H   NI    S D+IY LPKQ++  WE +L   
Sbjct: 117 LQPSLLNQMHRHHTSEDVLACIKRIHAHGIHNI----SIDMIYGLPKQSLAMWEEDLHTI 172

Query: 195 LS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +S + + H+SLY LTIE  + F +      +    E++  D+Y+L  ++   +G   YEI
Sbjct: 173 VSSFPIQHISLYGLTIEPHSEFGRQ----GIQNIDEDIEADMYDLAITLLQQYGFQQYEI 228

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +     SLHN  YWRY D+ GIG GA  + K G +    ++E +       +++   
Sbjct: 229 SNFAKPKYASLHNQVYWRYEDFYGIGCGASGKDKRGRYENTRNLETY-------LQQGAS 281

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
           +V EK  L ++ Q  E +MM LR+++GIS + +    G+++  E   ++   Q++  +  
Sbjct: 282 SVYEK--LDTKAQMFEMIMMSLRMKQGISRQAFFERFGKDIS-EVYGSIIEKQKEKGLLL 338

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           V   ++  ++RG  +L+ V+   
Sbjct: 339 VDEEKIWASERGFHLLNDVLVEF 361


>gi|313157257|gb|EFR56686.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alistipes sp. HGB5]
          Length = 370

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 170/330 (51%), Gaps = 19/330 (5%)

Query: 20  GVYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           G+Y H PFC + C YCDF  ++ +RR     ++ + +   E+   R   G  ++++ +FG
Sbjct: 3   GLYFHIPFCKRVCAYCDFYKSADLRR----MDDLLAAMHRELDDRRGYPGGEAVTTRYFG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ I  +LD  A+ +  S   E T+EANP  +      G  +AG++R+S+GV
Sbjct: 59  GGTPSLCTPEAIRGLLDHAAQLFDCSGAEETTLEANPDDLTAEYLGGLLEAGIDRLSIGV 118

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ + R H A++A  AI  A+   F  ++ DLI+ +P          L  ALS
Sbjct: 119 QSFDDDCLKLMNRRHTAAQAAEAIRAAQRAGFGNITLDLIFGVPGFGGDTLRRSLDTALS 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHAYEISN 255
             V H+S Y LT+E  T F +    G+     E V+  +   + +++T A G   YE+SN
Sbjct: 179 LGVQHISAYHLTVEPDTAFGRRAARGEFRAVDEQVSETEFLTVHETLTRA-GFEHYEVSN 237

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G  + HN  YW    Y+GIGP AHS      H    S+E++               
Sbjct: 238 FALPGFRARHNAAYWHGAKYLGIGPAAHSFDGEERHWNVGSVERYIAG----------DP 287

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKD 345
            E+E L++  + +E++M  LR  EGI  ++
Sbjct: 288 AERELLTNRDRFNEYVMTALRTAEGIDTRE 317


>gi|226227306|ref|YP_002761412.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
 gi|226090497|dbj|BAH38942.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
          Length = 400

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 190/382 (49%), Gaps = 20/382 (5%)

Query: 26  PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           PFC ++C YCDF+  VRR +V  + ++     E+   R    P  + +++FGGGTPS + 
Sbjct: 18  PFCARRCSYCDFSIAVRR-EVPWQEYVNGIRAELALQRPAGKP-VLRTLYFGGGTPSRLG 75

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  +L  + +++    + E+T+EANP  + V++ + +R AG+NR+S+GVQS  +  L
Sbjct: 76  VDGVCALLALMREHFLWDESAEVTLEANPEDISVDSVRAWRIAGINRLSIGVQSFHDDVL 135

Query: 146 RFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           R++ R H+A  A  A+  AR+      S DLI+A P      W  +L++A++   DH+SL
Sbjct: 136 RWMHRVHDADAAKRAVGAARDGGIVDHSIDLIFATPDGVHRSWTDDLEQAIALGADHVSL 195

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           Y LT+E  T   + +  G +    E      +        A G   YE+SN++  G  + 
Sbjct: 196 YGLTVEPHTPLGRWNARGAVAEAEEERYEREFLEAHHRLGAAGYEHYEVSNYARPGRRAR 255

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
           HN  YWR   Y+G+GP AH     G+ R     E    +WL+ V +    V   E L+ E
Sbjct: 256 HNSAYWRGVPYLGLGPSAHG--FDGTQRR--WNEPAYAAWLRQVTEGRDPVAGAEVLTDE 311

Query: 325 QQADEFLMMGLRLREGISVKDWE-MLAGRNLD--------IECERNLQRQ---GFIERVQ 372
            +  E + +GLR  +G+ +   E M   R +D        +E   +       G     Q
Sbjct: 312 NRIAESVYLGLRTVDGLPLSVAETMHVARWIDAGWATIQSVEATSHPSPHVGDGNAPYAQ 371

Query: 373 FS-RLRCTQRGMTMLDSVIANL 393
            + RL CT  G   LD++ A+L
Sbjct: 372 AAQRLTCTPMGWLRLDALAADL 393


>gi|189911761|ref|YP_001963316.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167776437|gb|ABZ94738.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
          Length = 390

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 6/278 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFI----QSFLTEMQWMRQLTGPRS 70
           +++LGVYVH+P+C+KKC YCDF S  +       E+ +    QS ++E          R+
Sbjct: 14  NSTLGVYVHFPYCLKKCDYCDFYSEGIGSGPANDESTLFSAYQSEVSERISHFPKLRERT 73

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPS    +     L+ +   ++ + + EI+IE NP  +  +    Y K G+
Sbjct: 74  VDTVFFGGGTPSKASTKLWKQFLEFLRSEFSFADDTEISIEVNPEDLSPDLLDEYAKIGI 133

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR+++GVQ+L  + L FLGR+++  +  + +  L  +   R+  DL+Y +P    + +  
Sbjct: 134 NRVNVGVQTLHPEGLSFLGRHYDKGKYTSLVTTLTHSPIQRVGIDLMYGIPGLKSSDFYR 193

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L + LS  + HLSLY LT+EKGT + +   D     P E    ++      +    G  
Sbjct: 194 DLDQFLSAGLPHLSLYSLTLEKGTKYSRDVSDSIKREPEEITQAEILVTLPELMEKFGYR 253

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            YE+SN++  G ES HNL YW Y  Y+GIGPGAH  ++
Sbjct: 254 WYEVSNYAKPGYESKHNLKYWTYEPYLGIGPGAHGMIE 291


>gi|45657289|ref|YP_001375.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600527|gb|AAS70012.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 388

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 189/392 (48%), Gaps = 39/392 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--------- 69
           G+Y+H+P+C++KC YCDF      Y VG  +N I       Q  ++    R         
Sbjct: 16  GIYIHYPYCIQKCEYCDF------YSVGNGKNQIPDETGLFQRYKEEIATRISDNPFISD 69

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               +IFFGGGTPS  E   I+ ++  +  N   S   EIT+E NP  +  +  +   +A
Sbjct: 70  LEFDTIFFGGGTPSRAEVSKISDLIFFLRNNIKFSKYSEITMECNPEDITPDFLKSIEQA 129

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NRIS+G+QS   + L+FLGR ++       +   +N      S DLIY +P QT+ + 
Sbjct: 130 GINRISVGIQSFHPEKLQFLGRYYDPDRYENVLETVKNSGISNFSADLIYGIPGQTVQEI 189

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             ++Q+ LS    H+SLY LT+EKGT + +   D     P E +   +  L   + S + 
Sbjct: 190 LQDIQKVLSAGGKHISLYALTVEKGTEYSRKVIDKISPSPEEEIQEKILKLLPDLLSPYE 249

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L  YE+SN S  G  S HNL YW    Y+GIGPGAH  +  G +        +P +    
Sbjct: 250 LFQYEVSNFSKPGFFSKHNLKYWTMEYYLGIGPGAHGFLPSGRY-------SNPRNVDTY 302

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLA--GRNLDIECERNLQR 364
            RKN      KE+ +     +E ++   RL + I ++  +E++    + LD++ ++  Q 
Sbjct: 303 KRKN----FSKEY-TKPNFYEELILSLFRLFQPILMESFYELIPDQSQTLDLQLKK-FQE 356

Query: 365 QGFIERVQFSR--LRCTQRGMTMLDSVIANLA 394
            G  E   FS    +     +  LDS I  L 
Sbjct: 357 SGLCE---FSNGIFQWKPEAVLFLDSKILELT 385


>gi|166032759|ref|ZP_02235588.1| hypothetical protein DORFOR_02474 [Dorea formicigenerans ATCC
           27755]
 gi|166027116|gb|EDR45873.1| hypothetical protein DORFOR_02474 [Dorea formicigenerans ATCC
           27755]
          Length = 328

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 177/348 (50%), Gaps = 28/348 (8%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           ++S   +++    L     + SIF GGGTPS +    +  I   +   + V  N EIT+E
Sbjct: 1   MKSLCQDIRSYAHLAKACRVISIFVGGGTPSTLTAFQMQQIFSAVRDTFVVEENAEITVE 60

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPR 170
            NP +V+     GY+K G+NR+S+G+QS + + L+ LGR H   E +   H+AR   F  
Sbjct: 61  MNPGTVDREKLSGYKKCGINRLSIGLQSTKNRELQILGRIHTYEEFLETYHMARAEGFEN 120

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV--LPS 228
           ++ DL+ A+P Q++T WE  L+     A +H+S Y L +E+GT FY+ + +G     LP 
Sbjct: 121 INVDLMSAIPGQSLTDWEENLKTVAELAPEHISAYSLIVEEGTPFYEEYGEGRHADELPD 180

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           E     +Y  T+ I S +G   YEISN++  G    HN+ YW   +Y+GIG GA S +  
Sbjct: 181 EETERKMYWRTKEILSKYGYERYEISNYAKPGYACRHNIGYWERTEYLGIGTGAASLINN 240

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                    EK                     L+   Q +E + +GLR+ +G+S  ++  
Sbjct: 241 SRFNYGEEPEK---------------------LTVSAQMEETMFLGLRMMKGVSKIEFLK 279

Query: 349 LAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + G +++       R+++++G +E  +   ++ T RG+ + + V++  
Sbjct: 280 MYGESMENVYGNVIRDMEQKGLLEDGE-DFVKLTDRGIDVSNYVMSEF 326


>gi|148825257|ref|YP_001290010.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittEE]
 gi|148715417|gb|ABQ97627.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittEE]
          Length = 309

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 156/268 (58%), Gaps = 13/268 (4%)

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           ++IA +L  I K     +N+EIT+EANPS+VE   F+GY  AG+ RIS+G+QS  +  LR
Sbjct: 5   ESIAHLLKEIKKQIDFENNIEITLEANPSTVEAKRFKGYVSAGITRISMGIQSFNDDKLR 64

Query: 147 FLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LGR HNA+EA +A++LA+ +     + DL++ LP QT+ +   +L++A+  +  H+S Y
Sbjct: 65  RLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQAIELSPPHISWY 124

Query: 206 QLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           QLTIE  T+F Y+  K     LP ++   D++     + +A G   YE S ++  G +  
Sbjct: 125 QLTIEPNTMFAYRPPK-----LPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKTGFQCK 179

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
           HNLNYWR+GDY+ IG GAH ++   +  +   S  K P+ +L+     G  + E++ +  
Sbjct: 180 HNLNYWRFGDYLAIGCGAHGKLTFPNGEITRFSKTKPPKGYLR-----GEYLYEEKNVPE 234

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAG 351
             +  EF M   RL E +  +++E   G
Sbjct: 235 IDRPFEFFMNRFRLLEAVPKQEFEDYTG 262


>gi|313901160|ref|ZP_07834648.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. HGF2]
 gi|312954118|gb|EFR35798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. HGF2]
          Length = 367

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 196/379 (51%), Gaps = 25/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VYVH PFC   C YCDF     RY  G  +  Q  +   + +++     S+ +++ GGG
Sbjct: 3   AVYVHVPFCRDICAYCDFTRC--RYHAGLAD--QWLIAVKRELQEKLAQVSVETVYIGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +L  +A   T     E T+EAN  S++ +  +  ++ GVNRISLGVQ+
Sbjct: 59  TPSALNSRQLEQLLKLLAPYTTQVQ--EYTVEANVESLDEDKMKLLKRYGVNRISLGVQT 116

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-Y 197
           L+   L  +GR H   E +  I  L +     +S DLIY LP+QTM  W+ +LQ  +  +
Sbjct: 117 LQPVLLSIIGRRHTREEVVERIRQLHQYGIHNISIDLIYGLPQQTMEMWQDDLQDIVQHF 176

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY LTIE+ + F    +DG   + + +V  D+Y    S    HG   YEISN +
Sbjct: 177 QISHISLYALTIEEHSQF---GRDGVENIDA-DVETDMYLYAVSYLKKHGFIQYEISNFA 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
              A SLHN  YW Y D+ GIG GA  +    S  +     ++  ++L+  + +   ++E
Sbjct: 233 KPNAASLHNQMYWNYEDFCGIGCGASGK----SGHIRYDNTRNLHTYLQ--KGSCPDIIE 286

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
              LS + +  E LMM LR+++G+S+  +      + +      LQ+    G ++ V+  
Sbjct: 287 ---LSRQDEMFEMLMMALRMKKGMSLSLFRERFAADFETIYSAPLQKNIANGMLQ-VKDD 342

Query: 375 RLRCTQRGMTMLDSVIANL 393
            +R T+ GM +L  V+ + 
Sbjct: 343 HVRTTEEGMLLLHDVLVDF 361


>gi|309775635|ref|ZP_07670635.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916729|gb|EFP62469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 367

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 197/381 (51%), Gaps = 29/381 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YVH PFC   C YCDF     RY  G  E ++ +   E+    +     ++ +++ GG
Sbjct: 3   ACYVHVPFCRDICAYCDFTR--CRYHAGLAEQWLIAIEKELH---EKLAESALETMYIGG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++ + +  +L  ++  +T     E T+EAN  S++    +     GVNRISLGVQ
Sbjct: 58  GTPSALQLEQLNRLLQLLSP-YTARVQ-EYTVEANVESLDEEKMELLHSYGVNRISLGVQ 115

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-S 196
           SL+ Q L  + R H+ +E +  IH L  +    +S DLIY LP+Q+M  W+ +LQ  +  
Sbjct: 116 SLQPQLLSIINRQHSKAEVVQRIHQLHAHGIHNISIDLIYGLPQQSMAMWKQDLQEIVQQ 175

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           + + H+SLY LTIE+ + F    +DG   + + ++  D+Y         HG   YEISN 
Sbjct: 176 FPISHISLYALTIEEHSQF---GRDGVKNIDA-DMEADMYVYAVEYLQKHGFEQYEISNF 231

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S+HN  YWRY D+ GIG GA  + +   +    ++  +      + + +   +V
Sbjct: 232 AKPGCASMHNQMYWRYEDFCGIGCGASGKSRHIRYDNTCNLHTY------LQKGSCPDIV 285

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQ 372
           E   LS E +  E LMM LR+++G+S+  ++ +   +L+      LQ+   IER    ++
Sbjct: 286 E---LSREDEMFEMLMMSLRMKQGVSLSRFKEVFHADLETVYHEALQKN--IERGMLQIE 340

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              +R T  G+ +L  V+ + 
Sbjct: 341 DGHVRTTWEGLLLLHDVLIDF 361


>gi|183221686|ref|YP_001839682.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
 gi|167780108|gb|ABZ98406.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 407

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 6/278 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFI----QSFLTEMQWMRQLTGPRS 70
           +++LGVYVH+P+C+KKC YCDF S  +       E+ +    QS ++E          R+
Sbjct: 31  NSTLGVYVHFPYCLKKCDYCDFYSEGIGSGPANDESTLFSAYQSEVSERISHFPKLRERT 90

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPS    +     L+ +   ++ + + EI+IE NP  +  +    Y K G+
Sbjct: 91  VDTVFFGGGTPSKASTKLWKQFLEFLRSEFSFADDTEISIEVNPEDLSPDLLDEYAKIGI 150

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR+++GVQ+L  + L FLGR+++  +  + +  L  +   R+  DL+Y +P    + +  
Sbjct: 151 NRVNVGVQTLHPEGLSFLGRHYDKGKYTSLVTTLTHSPIQRVGIDLMYGIPGLKSSDFYR 210

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L + LS  + HLSLY LT+EKGT + +   D     P E    ++      +    G  
Sbjct: 211 DLDQFLSAGLPHLSLYSLTLEKGTKYSRDVSDSIKREPEEITQAEILVTLPELMEKFGYR 270

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            YE+SN++  G ES HNL YW Y  Y+GIGPGAH  ++
Sbjct: 271 WYEVSNYAKPGYESKHNLKYWTYEPYLGIGPGAHGMIE 308


>gi|31793565|ref|NP_856058.1| coproporphyrinogen III oxidase [Mycobacterium bovis AF2122/97]
 gi|121638267|ref|YP_978491.1| coproporphyrinogen III oxidase [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224990761|ref|YP_002645448.1| coproporphyrinogen III oxidase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|31619158|emb|CAD97270.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE HEMN
           (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE)
           [Mycobacterium bovis AF2122/97]
 gi|121493915|emb|CAL72390.1| Probable oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224773874|dbj|BAH26680.1| coproporphyrinogen III oxidase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 375

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 20/388 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++   +   V  + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 118 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +   +   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 178 VRSVDATVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 237

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 238 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGV----TRWWNVKHPNTYAEI 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQ 365
           +      V   E L ++    E +++ +RLR+G+ +        R    E ER   +   
Sbjct: 294 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLA-------RLGAAERERAEAVLAD 346

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G ++     RL  T RG  + D+V+  L
Sbjct: 347 GLLD-YHGDRLVLTGRGRLLADAVVRTL 373


>gi|291530742|emb|CBK96327.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium siraeum 70/3]
          Length = 364

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/349 (34%), Positives = 170/349 (48%), Gaps = 42/349 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNS------HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G+Y+H PFC+ KCPYCDF S         RYK      ++ +L++ + +R         +
Sbjct: 4   GLYIHIPFCLSKCPYCDFYSVAFDSDTANRYKDAVIRNLRYYLSQNENLR-------FDT 56

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTP L+  + I  I+D I     ++S+ EIT+EANP   + N     +   VNRI
Sbjct: 57  VYFGGGTPILLW-REICDIMDEIQP--YIASDAEITVEANPCCTDENALCSLKAHNVNRI 113

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+QS  +  L+ LGR HN+     A+ +A +  F  +S D++  +P QT       + 
Sbjct: 114 SFGLQSGIDNELKALGRRHNSKVGADAVKMAYKAGFDNISGDIMLGIPLQTSDSLIETIS 173

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              S  + H+S Y L IE  T F K     +L+LP E+   ++Y  T    S  G   YE
Sbjct: 174 YMTSLPLSHISAYMLKIEPDTPFAKK----ELILPDEDGYANIYLETVERLSDKGFRQYE 229

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-----RVKVGSH-RVAISIEKHPESWLK 306
           ISN +  G ES HNL YWR  +Y+GIGP AHS     R  VG   R  I  E  P     
Sbjct: 230 ISNFAKPGMESRHNLRYWRCEEYLGIGPAAHSYYNGERFAVGRDLRAFIESEVQPA---- 285

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                   + E+E    E+ A    M+ LRL EG+     E   G   D
Sbjct: 286 -------VITERECGDYEEWA----MLKLRLSEGLDFDTAEKRFGITKD 323


>gi|257791400|ref|YP_003182006.1| oxygen-independent coproporphyrinogen III oxidase [Eggerthella
           lenta DSM 2243]
 gi|257475297|gb|ACV55617.1| oxygen-independent coproporphyrinogen III oxidase [Eggerthella
           lenta DSM 2243]
          Length = 370

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 186/369 (50%), Gaps = 28/369 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCVK+C YCDF +        + E +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVKRCAYCDFATAAVPAGAPEIEAYVEDLSLQIRRKAKEGELGAVETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHVGLAGLSMLLYTLSLSMHLTDEVECTMEANPESLTERMVRDIWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR LGR H++ +A  AI  AR  F  +S DL+  +P Q+   +E  ++ A+   
Sbjct: 128 SFDDDVLRTLGRAHSSDDARRAIEAARTRFENVSVDLMCGIPGQSAEGFEASVREAVRLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F      G+L  P ++V      +   +  + G   YE+++++ 
Sbjct: 188 ATHVSVYPLTIEPHTPFDAAVLAGELEEPDDDVEAAHMQIAARVLDSEGFERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A +  +    R+ +              K+G      
Sbjct: 248 PGFACRHNIAYWTGVPYLGLGRSAATMTQNAQRRMRV--------------KDGQVT--- 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQRQGFIERVQF 373
           + L   Q A E LM+G+R+  G+S +     A R  ++  E      +L+RQG +E  + 
Sbjct: 291 DDLDPRQMAAENLMLGMRMTAGVSDEH----AARAAELLPEATTVLADLERQGLVEH-EG 345

Query: 374 SRLRCTQRG 382
            R R T+RG
Sbjct: 346 GRWRPTERG 354


>gi|305665345|ref|YP_003861632.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
 gi|88710100|gb|EAR02332.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
          Length = 346

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 177/329 (53%), Gaps = 11/329 (3%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I +I+FGGGTPS+++   I  ++  +  N+ V  N EIT+EANP  + +N      ++ +
Sbjct: 21  IETIYFGGGTPSVLDINEINDLIKTVYSNYEVVENPEITLEANPDDLSMNKIIELSQSPI 80

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+QS  E+ L  + R HNA EA   I  A   F  +S DLIY +P  T  +W   
Sbjct: 81  NRLSIGIQSFFEEDLLLMNRAHNAKEAEECITEATKYFDNISIDLIYGIPNMTNERWLQN 140

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ALSY + H+S Y LT+E  T      + G +    E +A + + +   + + +G   
Sbjct: 141 IEKALSYNIPHISSYALTVEPKTALANFIQKGKMSPLDEELAQEHFQMLYEVLTINGYDC 200

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN    G  S +N  YW    Y+GIGP AHS       R + ++  +P+ +LK + +
Sbjct: 201 YEISNFGKPGYYSKNNTAYWLGKTYLGIGPSAHS---YDGRRRSWNVSNNPK-YLKSI-E 255

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQG 366
           +G    E E LS   + +E++M GLR   G+S++      G+     L  + E+ L +Q 
Sbjct: 256 SGQLPSEVEELSLNDKYNEYIMTGLRTSWGVSLQRISQEFGKERLNYLTRQSEQYLDQQL 315

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +  ++  +L  T++G  ++D + ++L V
Sbjct: 316 LV--LKEDQLIATKKGKFLVDGIASDLFV 342


>gi|294673365|ref|YP_003573981.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           ruminicola 23]
 gi|294473953|gb|ADE83342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella ruminicola 23]
          Length = 375

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 194/383 (50%), Gaps = 22/383 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIF 75
           G+YVH PFC  +C YC F S        +E ++ +   E++     T P     S+ +I+
Sbjct: 3   GLYVHIPFCSSRCVYCGFYSTTGL--ALRERYVDALCQEIKMRSLPTNPPQKEGSLGTIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS +    +  I D I     V ++ E+TIE NP  V        ++  +NR+S+
Sbjct: 61  LGGGTPSQLTIPQLRRIFDAIYIYNKVENDAEVTIEVNPDDVTPELAAALQQLPINRVSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+  ++ L FL R H++++   A+   R   F  +S DL+Y  P QT+ +W+ ++  A
Sbjct: 121 GAQTFNDERLHFLRRRHSSAQVHQAVATLRQAGFQNISIDLMYGFPNQTLEEWQADIDEA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAYEI 253
           L   V+H+S Y L  E+GT  Y++ + G +    E +   +Y  L  S+ SA G   YEI
Sbjct: 181 LQLNVEHISTYCLMYEEGTPLYRLLEQGKVAEIDEELERKMYFTLINSLESA-GYEHYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN +  G  S HN +YW+   YIGIG  AHS  ++  S  VA  I+++  +      + G
Sbjct: 240 SNFARPGYRSRHNSSYWKGIPYIGIGAAAHSFDIQTRSWNVA-DIQQYITAM-----EQG 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIER 370
               E E L  + + ++ + + LR  EG+   D   L  +     C +N QR  +  + +
Sbjct: 294 ERCFEAETLDEDTRYNDAVTVALRTCEGL---DLSTLTDQQRAY-CLKNAQRHLEAGLLK 349

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           +   ++  T+ G+ + D ++++L
Sbjct: 350 LNDQKISLTKEGLFVSDMIMSDL 372


>gi|87125529|ref|ZP_01081374.1| Oxygen-independent coproporphyrinogen III oxidase:Putative oxidase
           [Synechococcus sp. RS9917]
 gi|86166829|gb|EAQ68091.1| Oxygen-independent coproporphyrinogen III oxidase:Putative oxidase
           [Synechococcus sp. RS9917]
          Length = 429

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 180/372 (48%), Gaps = 28/372 (7%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISS 73
            YVH PFC ++C YCDF                   IQ++L  +     L+  GP  +++
Sbjct: 7   AYVHIPFCHRRCFYCDFAVVPLGDRADAAAGPGRASIQAYLALLHEEIGLSPAGP-PLAT 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTPSL+ P  IA +L  + + + +    EIT+E +P+S ++ + +    AGV R+
Sbjct: 66  VYVGGGTPSLLTPSQIADLLQRLTQRFGLQDGAEITLEMDPASFDLQHLEAVLDAGVTRV 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-----HLARNIFPRMSFDLIYALPKQTMTQWE 188
           SLG QS ++  L  LGR H  ++  AA       L +      S DLI  LP QT  QW+
Sbjct: 126 SLGGQSFDDGVLASLGRRHRRADLQAACTWLQRALLQGRLTSWSLDLIRNLPGQTEAQWQ 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L+ AL+  V HLS+Y L++E GT+F    + G+LVLP +  AV+    T       G 
Sbjct: 186 QQLELALAAGVPHLSVYDLSVEPGTVFAWRQQRGELVLPDDGEAVERIRQTGERLRQAGF 245

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN++  G  S HN  YW    + G G GA S    G       I +    WL   
Sbjct: 246 CRYEVSNYARPGHASRHNRVYWSGAGWWGFGLGATS-APWGRRLARPRIREAYARWLMTQ 304

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNL----- 362
           R+     +     +     D+ L++GLR REG+ +  W + A    D   CER+L     
Sbjct: 305 RQQPDCSLLAS-AAVPLPLDDLLLVGLRRREGVDL--WRLAAASGWDAATCERHLPDLER 361

Query: 363 -----QRQGFIE 369
                + QG IE
Sbjct: 362 RWLEPEAQGLIE 373


>gi|89898396|ref|YP_515506.1| coproporphyrinogen III oxidase [Chlamydophila felis Fe/C-56]
 gi|89331768|dbj|BAE81361.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           felis Fe/C-56]
          Length = 375

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 183/341 (53%), Gaps = 18/341 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTE-MQWMRQLTGP 68
           M   G   L +Y+H+PFC KKC YC+F +       VG   +  + L E +  +  +T  
Sbjct: 1   MLMNGKTPLALYIHFPFCSKKCHYCNFYTIPYNPESVGL--YCNAILQEGLHKLSTITDS 58

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             I ++F GGGTPSLI P ++  I+  +A +       EIT+EANP  +  +  +   + 
Sbjct: 59  YFIDTVFLGGGTPSLIPPHHLHNIIKILAPHAQ-----EITLEANPEDLSESYLRDLTQT 113

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
            +NRIS+GVQ+  +  L+ +GR H++S +I A+     + +  +S DLIY LP Q+++ +
Sbjct: 114 PINRISIGVQTFHDPLLKAIGRIHSSSASIDAVQRCHEHEYHNISIDLIYGLPTQSLSDF 173

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L +ALS  + HLSLY LT++  T FYK  +  +  +  +++   +    + + S+HG
Sbjct: 174 IADLHQALSLPITHLSLYNLTLDPHTSFYKHRRILERSIADDDILAAMSLSAEELLSSHG 233

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVA-ISIEKHPESWL 305
              YE+++++   A+S HNL YW    ++G+G  A     K+ S  ++ IS       +L
Sbjct: 234 FSRYELASYAKFQAQSKHNLYYWTDKPFLGLGVSASQYFNKIRSKNLSRIS------HYL 287

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           + +RKN       E L  E++  E L + LRL  G   KD+
Sbjct: 288 RALRKNLPLQEFTECLPEEERIKEALALRLRLTNGARWKDF 328


>gi|319950004|ref|ZP_08023986.1| oxygen-independent coproporphyrinogen-III oxidase HemN [Dietzia
           cinnamea P4]
 gi|319436332|gb|EFV91470.1| oxygen-independent coproporphyrinogen-III oxidase HemN [Dietzia
           cinnamea P4]
          Length = 363

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 157/339 (46%), Gaps = 27/339 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--------------MRQ 64
            G+Y+H PFC  +C YCDFN+    Y  G+   + S  + + W              +  
Sbjct: 24  FGIYLHVPFCSTRCGYCDFNT----YTAGE---LGSATSPVDWERAAAIEIERAAQALSS 76

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  + ++F GGGTPSL+    +  +L  I   ++++   E+T E+NP S     F  
Sbjct: 77  AGAPPEVDTVFIGGGTPSLVGADVLVGLLARIDAAFSLAPGAEVTTESNPESTSPEFFAR 136

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQT 183
            R+ G  RISLG+QS     LR L R H       A+  A R  F  ++ D+IY  P +T
Sbjct: 137 LREGGFTRISLGMQSTAAHVLRVLDRAHTPGRPQEAVAEALRAGFEHVNLDVIYGTPGET 196

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L   +   VDH+S Y L +E GT   +  + G++    ++V  D Y       
Sbjct: 197 DDDLARTLDAVVGAGVDHVSAYSLIVEDGTALARRIRRGEMPGTVDDVLADRYEQVADRL 256

Query: 244 SAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +  G H YE+SN +    A   HN+ YWR GD+ G+GPGAHS V  G+    +   +HP 
Sbjct: 257 ARAGFHWYEVSNFATDSSAYCRHNMGYWRGGDWWGVGPGAHSHV-AGARWWNV---RHPA 312

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
            +          V   E L    +  E +M GLRL EG+
Sbjct: 313 RYAAECDAGRLPVDGGEMLDDSDRHIERIMTGLRLAEGL 351


>gi|6466832|gb|AAF13050.1|AF157642_2 putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfitobacterium dehalogenans]
          Length = 374

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/285 (36%), Positives = 157/285 (55%), Gaps = 8/285 (2%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +RQ      +S++F GGGTP+ +  + +  +L  I  N+    + E T+EANP ++    
Sbjct: 8   LRQQKVQEGMSTLFIGGGTPTALNEEELDTLLSIINSNFKFKDSAEKTMEANPGTLTTEK 67

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            Q  RK G+NR+SLGVQSL +  LR +GR H   E   A+ L R   F  ++ DL++ LP
Sbjct: 68  LQTLRKQGINRVSLGVQSLNDDLLRQIGRIHRXEEVKDAVRLXREAGFKNLNLDLMFGLP 127

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q +  W   L+  L    +H+S+Y L +E+GT    ++K+    LP ++   +LY+LT+
Sbjct: 128 GQNLADWRDTLEETLRIRPEHISVYGLMVEEGTPI-ALNKELIANLPDDDTQAELYHLTR 186

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            I    G   YEISN++  G E  HNL  WR  +Y+GIGPGA S +K   +R   + E  
Sbjct: 187 EILGKAGYQHYEISNYALPGYECQHNLGXWRRMEYLGIGPGAVSCLK---NRRXKNFEXX 243

Query: 301 PESWLKMVRKNGHAV--VEKEFLSSEQQADEFLMMGLRLREGISV 343
              + KM+ K    V   E E LS  +Q  E  ++GLRL++G ++
Sbjct: 244 -XLYEKMLSKWELPVDSKENEXLSKREQMVEXXILGLRLKDGXNL 287


>gi|290969184|ref|ZP_06560709.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290780690|gb|EFD93293.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 372

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 184/361 (50%), Gaps = 19/361 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +G+Y+H PFC  KC YCDF S+  V  Y    E ++++   E+      TG     +++F
Sbjct: 2   IGIYIHIPFCTGKCRYCDFPSYSGVSSYY---EAYVEAVCRELS---AYTGDTRADTVYF 55

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++    +  +L  + + ++++   EIT EANP S+     + +   G+NR+SLG
Sbjct: 56  GGGTPSVLPTALLEKLLHTVQQVFSLAPATEITAEANPESLRREQCEKWAALGINRVSLG 115

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+  +  L+ LGR H A++A  A+  +A      +S DL+Y LP QT+  ++ ++Q   
Sbjct: 116 VQTFHDALLQSLGRLHTAAQAYEALQAVAAAGITNISLDLMYGLPGQTLQAFKEDIQTLS 175

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V H+S+Y+LT+E+ T  +   + G   + +      +           G   YEIS 
Sbjct: 176 RLPVTHVSIYRLTVEEHTPLWHSVQAGKERVANAAEVEAMQQYLYGTMRQMGFEHYEISA 235

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G  + HN  YWRY  YIG G  AHS           ++   P+ +++    +G  +
Sbjct: 236 YAKPGYRARHNCKYWRYEPYIGFGAAAHS---FDGQTRRCNVRSLPQ-YIRSCTTSGR-I 290

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKD----WEMLAGRNLDIECERNLQRQGFIERV 371
            E+  +++ +  +++  + LR+R+GI   D    +++  G       ER L  QG ++R 
Sbjct: 291 QEETRIAAARAMEDYCFLALRMRDGIDYDDFFQRFQVSFGSQFG-RTERRLYEQGLLQRT 349

Query: 372 Q 372
           +
Sbjct: 350 E 350


>gi|331270015|ref|YP_004396507.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
 gi|329126565|gb|AEB76510.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Clostridium botulinum BKT015925]
          Length = 343

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 156/279 (55%), Gaps = 6/279 (2%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + I +IF GGGTP+ +  +   ++   I K    S ++E T+E+NP + +    +  +  
Sbjct: 18  KKIKTIFIGGGTPTYLSLEGWNILKKSIDK-LQKSDDLEFTVESNPKTFDKEKLEILKSM 76

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNRIS+G+Q+ +++ L+ LGR H   E + + ++AR + F  ++ DL++ +P Q+  +W
Sbjct: 77  GVNRISIGLQAWQDKHLQALGRIHTREEFLKSYNMAREVGFKNINIDLMFGIPNQSFDEW 136

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L        +HLS Y L IE+GT FY ++++  + LPSE +   +Y  T       G
Sbjct: 137 KETLDEITELNPEHLSCYSLIIEEGTPFYNLYENNKINLPSEELERKMYWYTLKFLKEKG 196

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            H YEISN S    E  HNL YW   +YIG G  AHS  +   +R +  IE+    ++K 
Sbjct: 197 YHQYEISNFSKKDKECRHNLVYWDLNEYIGCGVAAHSYSEGYRYRNSDKIEE----YIKF 252

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +  N  A+VEK   S +   +EF+ MGLR  +GIS+ ++
Sbjct: 253 IENNQSAIVEKIKNSLKSDIEEFIFMGLRKIKGISLDEF 291


>gi|168702555|ref|ZP_02734832.1| coproporphyrinogen III oxidase [Gemmata obscuriglobus UQM 2246]
          Length = 383

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 174/382 (45%), Gaps = 22/382 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSIFF 76
            YVH PFC   C YCDF         GQ++ I+ +L     E+  +R+   PR + S+F 
Sbjct: 6   AYVHVPFCAHHCGYCDFA-----VTAGQDHLIELYLEAVGAELAGLRE---PRPVESLFI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+ +    +  +++ + + W      +  E +IEANP S+           GVNR+
Sbjct: 58  GGGTPTHLSADQLRRLIETVTR-WLPPGRGAGREFSIEANPDSLTEEKTAVMAALGVNRV 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+GVQS   +SL  L R H       A+   R   P +SFDLI+  P  T+  W  +L  
Sbjct: 117 SVGVQSFRPESLAALDRRHAPEHIGRAVDAVRKHIPVVSFDLIFGAPGSTIEGWRADLDA 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++   H+S Y LT EKGT  +K    G +    E+  + +Y       +A G   YEI
Sbjct: 177 ALAFDPQHVSTYGLTYEKGTPLWKRQTRGLVEAVPEDTELAMYEHAMDRLAAAGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G    HN  YW    Y G G GA +R   GS  + +   K    +++       
Sbjct: 237 SNFARPGYRCRHNERYWANDAYYGFGVGA-ARYVNGSRELNVRDTK---LYIRKALGGED 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERV 371
              ++E L    +A E L   LR  +GI    +    G +LD      L   R   I   
Sbjct: 293 VTFQRETLEPRARAFETLATQLRRADGIDRVPFRAQTGFDLDALAPVALALFRDHGIVTD 352

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              R+R T+RG  + D+ +A L
Sbjct: 353 DGHRVRLTRRGKCVADAAVAEL 374


>gi|325831426|ref|ZP_08164680.1| coproporphyrinogen dehydrogenase [Eggerthella sp. HGA1]
 gi|325486680|gb|EGC89128.1| coproporphyrinogen dehydrogenase [Eggerthella sp. HGA1]
          Length = 370

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 28/369 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCVK+C YCDF +        + E +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVKRCAYCDFATAAVPAGAPEIEAYVEDLSLQIRRKAKEGELGAVETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHVGLAGLSMLLYTLSLSMHLTDEVECTMEANPESLTERMVRDIWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR LGR H++ +A  AI  AR  F  +S DL+  +P Q+   +E   + A+   
Sbjct: 128 SFDDDVLRTLGRAHSSDDARRAIEAARTRFENVSVDLMCGIPGQSAESFEASAREAVRLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LT+E  T F      G+L  P ++V      +   +  + G   YE+++++ 
Sbjct: 188 ATHVSVYPLTVEPHTPFDAAVLAGELEEPDDDVEAAHMQIAARVLDSEGFERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A +  +    R+ +              K+G      
Sbjct: 248 PGFACRHNIAYWTGVPYLGLGRSAATMTQNAQRRMRV--------------KDGQVT--- 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQRQGFIERVQF 373
           + L S Q   E LM+G+R+  G+S +     A R  ++  E      +L+RQG +E  + 
Sbjct: 291 DDLDSRQMVAEDLMLGMRMTAGVSDEH----AARAAELLPEATTVLADLERQGLVEH-EG 345

Query: 374 SRLRCTQRG 382
            R R T+RG
Sbjct: 346 GRWRPTERG 354


>gi|312879933|ref|ZP_07739733.1| oxygen-independent coproporphyrinogen III oxidase [Aminomonas
           paucivorans DSM 12260]
 gi|310783224|gb|EFQ23622.1| oxygen-independent coproporphyrinogen III oxidase [Aminomonas
           paucivorans DSM 12260]
          Length = 376

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 169/329 (51%), Gaps = 12/329 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G   L +YVH PFC  KCPYC F S     +  ++ +++    E+++       R +SS+
Sbjct: 6   GRGPLALYVHVPFCTAKCPYCAFPS-APPGEGDEDRYLEGIGREVRFWASRLKRRGLSSL 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ + P     ++  + + ++  S+ EIT+EANP S+   + + + +    R+S
Sbjct: 65  YVGGGTPTRLSPSGWERLIRFLEEAFSFRSSTEITVEANPESLSPEHLEIWGRWRPLRVS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS  ++ L  LGR H+ + A  AA+ + R   P +  DL++ +P+QT+  +   L+ 
Sbjct: 125 LGVQSFRDEELVALGRLHDGARAREAAMRIRRQGIP-LGLDLMFGIPRQTLRTFAESLRE 183

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS   +HLSLYQL +E+GT F +   +G             Y   Q      G   YE+
Sbjct: 184 ALSLDPEHLSLYQLMLEEGTPFGESPPEG-----RAEEGYPFYRYAQWRLPRAGYGQYEV 238

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           ++ +  G    HNL YW  GD++G+GPGA   +    +R   ++      W     +   
Sbjct: 239 ASFALSGRWRRHNLRYWLGGDFLGLGPGAWGCLGGWRYRNDPTL----TGWRARTDRGRS 294

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           A +  E LS E++A E  ++ LR R G S
Sbjct: 295 AALWGERLSGERKAREEAILALRTRWGWS 323


>gi|325105239|ref|YP_004274893.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
 gi|324974087|gb|ADY53071.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
          Length = 377

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 168/327 (51%), Gaps = 12/327 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC + C YCDF+ S   +YK   ++ +++   E+   +       I +I+FGG
Sbjct: 3   GIYIHIPFCKQACHYCDFHFSTSLKYK---DDMLKAINREILLQKNFLQNEKIETIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    I  I + I + +     VE+T+E NP  +        +   VNR S+G+Q
Sbjct: 60  GTPSLLTSDEINKITEQIQRYYIADELVEVTLETNPDDLSSQKIAALKHTPVNRFSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L+++ R H A EA  AI  +++  F  ++ DLIY  P  T  +W++ + + L+ 
Sbjct: 120 SFFNEDLKWMNRAHQAKEAEFAIKASQDAGFENLTVDLIYGYPLLTKEKWDLNINQVLAM 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + H+S Y +T+E  T      K G D  +     A    +L+  +   +G   YEISN 
Sbjct: 180 DIPHVSCYSMTVEPKTALASFIKKGIDKNMDDTKSAEQFLHLSAKLQE-NGFEHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN NYWR   Y+GIGP AHS    G  R   +I  +      + + N  A  
Sbjct: 239 AKGNKYSVHNTNYWRGVKYLGIGPSAHSF--DGKDR-QWNIANNALYMQSLGKDNIPA-- 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           EKEFLS + + +E++M  LR   G+ +
Sbjct: 294 EKEFLSPKDRVNEYIMTALRTMWGLDL 320


>gi|225378445|ref|ZP_03755666.1| hypothetical protein ROSEINA2194_04113 [Roseburia inulinivorans DSM
           16841]
 gi|225209668|gb|EEG92022.1| hypothetical protein ROSEINA2194_04113 [Roseburia inulinivorans DSM
           16841]
          Length = 404

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 205/409 (50%), Gaps = 47/409 (11%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           +KKC YCDF S     +  Q++++ +   E+ +       R I++IF GGGTPS ++   
Sbjct: 1   MKKCDYCDFLSFAADEQT-QKSYVAALQKELAFYGAKYKDRRITTIFIGGGTPSWLKEDY 59

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  I++ +   ++V  + EITIE NP ++  + F+ YR+ G+NR+S+G+QS+  + L+ L
Sbjct: 60  MQAIMETVYHYFSVEQDAEITIECNPGTITEHKFEVYRRIGINRLSIGLQSVHNEELKIL 119

Query: 149 GRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H   + +    +AR + F  ++ DL+ +LP QT   +   L + L    +H+S Y L
Sbjct: 120 GRIHTFEQFLKTYDMARKHGFSNINIDLMSSLPGQTPEIFCDSLYQVLKLKPEHISAYSL 179

Query: 208 TIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            IEKGT FY++++  D V          LP+E        + Q I    G H YE+SN +
Sbjct: 180 IIEKGTPFYELYR-FDAVRQEAGMQTESLPTEEEEYQTTKMIQHILKEAGYHWYEVSNFA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS---RVKVGSHRVAIS----IEKHPESWLKMVRK 310
             G E  HN+ YW+  DY+G+G GA S    V+  + R   +     E   + +++    
Sbjct: 239 KPGYECRHNIGYWKRVDYLGVGLGASSLIDNVRYSNTRDLYTYLSECENIHDCYMQYPLT 298

Query: 311 NG---------------------HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            G                     HA  E+   +  +Q +EF+ +GLR+R+G   +++   
Sbjct: 299 EGVTGSAVYSADGTHILVPAVNLHAAAEQ--TTRNEQMEEFMFLGLRMRDGFYREEFTQA 356

Query: 350 AGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G  ++    +   +LQ++  + + +  R+  T +GM + + V+A   +
Sbjct: 357 FGIPIEAVYGDALNHLQQEELLLKRE-GRIYLTDKGMDLNNYVVAQFML 404


>gi|159897530|ref|YP_001543777.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890569|gb|ABX03649.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 424

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 199/421 (47%), Gaps = 62/421 (14%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----------------QWMRQ 64
           +YVH PFC  +C YCDFN+   R     E+F+Q ++  +                 W + 
Sbjct: 9   LYVHIPFCQTRCAYCDFNTFANR-----EDFMQRYIDALCLHLKRMASGETIADPTWPQV 63

Query: 65  LTGPRSISS------------------IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
             GP   +S                  +F GGGTP+ +    +  ++  I +   ++   
Sbjct: 64  ADGPIPWASYQLHDLVGPLQQADLPATVFLGGGTPTALPLHLLEQLMQTIGQIIPLA-QA 122

Query: 107 EITIEANPSSVEVNNF-QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           E+T EANP +V  +N+ +  R  G+NR+S+GVQ+L + +LR LGR H ASEA A+   AR
Sbjct: 123 EVTSEANPGTVLDHNYLRAMRSMGINRLSMGVQTLHDPTLRVLGRIHTASEAYASYQAAR 182

Query: 166 NI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            + F  ++ D ++ LP Q   QW   L   + +  +H +LY L +E  T        G +
Sbjct: 183 KVGFENINLDFMFGLPGQDTAQWRAMLNEIVGWDAEHFALYSLIVEPSTPLAAQVTAGRV 242

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEIS------NHSFLGAESL------HNLNYWRY 272
            +P+++   ++Y     I  A G   YEIS      N +F  +E L      HN+ YW  
Sbjct: 243 SIPNDDATGEMYEAAMEILGAAGYGHYEISNWAKTQNSAFNPSERLPAYASRHNVAYWLN 302

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
            DY+G+G GAHS  + G   V   I    E + + V      +++ +    + +  E +M
Sbjct: 303 ADYLGVGAGAHSHWR-GWRWVDQRIL---EPFAQQVEHGQAPLIDIQVCEPQDRDFETIM 358

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSV 389
           MGLRL  G+    ++   G +L  + +  +++   QG +E+   + +R T RG  + + V
Sbjct: 359 MGLRLNCGLGFAHFQQRTGHDLLAQYQPIIEQLVGQGLLEQTT-NAIRFTPRGRMVGNQV 417

Query: 390 I 390
           I
Sbjct: 418 I 418


>gi|87302968|ref|ZP_01085772.1| Oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 5701]
 gi|87282464|gb|EAQ74423.1| Oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 5701]
          Length = 406

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 171/345 (49%), Gaps = 23/345 (6%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
            Y+H PFC ++C YCDF       H           I ++L  +Q  +     P  +S++
Sbjct: 7   AYLHIPFCHRRCFYCDFAVVPLGDHA---DGAHSASIAAYLPLLQAEIAASPNPAPLSTV 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+ P+ +  +LDG+ + +  S   EIT+E +P+S +    +G    G+NR+S
Sbjct: 64  YIGGGTPSLLTPEQMGELLDGLRQRFGFSPGAEITLEMDPASFDRPRLEGMLALGINRVS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-----FPRMSFDLIYALPKQTMTQWEM 189
           LG QS ++  L  LGR H     + A    R           S DLI  LP+Q +  W  
Sbjct: 124 LGGQSFDDAVLERLGRRHRRRHLLQAAAWLRQAQAAADLASWSLDLIQGLPEQDLPHWRQ 183

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ+AL     HLS+Y L +E GT+F ++ + G L LP  ++  DL +LT     + G  
Sbjct: 184 QLQQALELEPPHLSVYDLIVEPGTVFERLQQRGQLPLPDPDLGADLMDLTGEQLRSAGYG 243

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G  S HN  YW    + G G GA S    G         +   +WL    
Sbjct: 244 RYEISNYALPGHASRHNRVYWSGAGWWGFGLGATS-APYGQRLARPRTREAYAAWL---- 298

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           + G A       + +   DE+LM+GLR REG++++     AG ++
Sbjct: 299 QTGAASTA----AGQPPFDEWLMVGLRRREGVNLERLAKAAGLSM 339


>gi|289548255|ref|YP_003473243.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
 gi|289181872|gb|ADC89116.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
          Length = 379

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 197/384 (51%), Gaps = 40/384 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR------RYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G+Y+H PFC +KCPYCDF S  R      +Y       ++   TE  W         + +
Sbjct: 4   GLYIHIPFCRQKCPYCDFVSLTRWNITFHQYLDLLLRELELRFTE-NW--------RVKT 54

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTPSL++ + +A  +  + +   V    EIT+E NP      ++     AGVNRI
Sbjct: 55  IYFGGGTPSLLDSKTLASFVSKLVQR--VGDVREITVECNPEDYTERDWGLLLSAGVNRI 112

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G QS   + L+ LGR+H+   +I ++  A +  F  ++ D+IYA P QT+   E EL+
Sbjct: 113 SIGAQSFLPKGLKILGRDHSVYHSIRSVLTAYKAGFRNINVDIIYAYPGQTLEDLEEELK 172

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                 + HLS Y LT  + TLF  M K G L +PS+    D++ L        G   YE
Sbjct: 173 VVRDLPIAHLSAYMLTPYEDTLFGIMVKKGQLEMPSDERVADMFLLLSEALEELGFVHYE 232

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEKHPESWLKMVR 309
           +SN +  G + +HNL YW +G+++G+G  A S V   ++G+ R   ++E + ++   M +
Sbjct: 233 VSNFAKKGYQCMHNLLYWTHGEFVGLGVSAWSFVENKRMGNTR---NLELYRDAL--MEK 287

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           K     VE+  L  ++   + L +GLR   G+  +   ++              R+ F+ 
Sbjct: 288 KLPVETVEE--LKGKELLFDRLFVGLRTAYGVEEELLPLIPSH----------IREFFV- 334

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
            V+  RLR T++G  +++S++  L
Sbjct: 335 -VEEGRLRLTKKGWLLMNSILLEL 357


>gi|33866180|ref|NP_897739.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 8102]
 gi|33639155|emb|CAE08161.1| possible oxygen independent coproporphyrinogen III oxidase
           [Synechococcus sp. WH 8102]
          Length = 407

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 185/386 (47%), Gaps = 34/386 (8%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQL----TGPRSI 71
            Y+H PFC ++C YCDF        V   +      I+ +L  +   R++    +GP  +
Sbjct: 10  AYLHIPFCHRRCYYCDFAVVPLGDRVDAREGPGSRSIEDYLRLLH--REIASAASGP-PL 66

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+++ GGGTPSL+    IA +L  + + + +    EIT+E +P+S +         AGVN
Sbjct: 67  STVYIGGGTPSLLTADQIAELLAALRRQFGLQPGAEITLEMDPASFDQAQLVAVLAAGVN 126

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAA---IHLAR--NIFPRMSFDLIYALPKQTMTQ 186
           RISLG QS ++  L  LGR H  ++ + A   +H A         S DLI  LP QT   
Sbjct: 127 RISLGGQSFDDAVLIDLGRRHRRADLLEACRWMHAAHQDGDLQSWSLDLIQNLPGQTFEH 186

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L +A+     HLS+Y L++E GT+F +  +  +L LP E++AV L   T +  +A 
Sbjct: 187 WDDQLDQAIGSQAPHLSVYDLSVEPGTVFARRAERAELDLPEEDLAVRLMAHTSARLAAA 246

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YEISNH+  G  S HN  YW    + G G GA S V+ G         +    WL+
Sbjct: 247 GLSRYEISNHARPGHASRHNRVYWSGAGWWGFGMGATSAVR-GERLARPRTREAYRRWLE 305

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQR 364
                           S    DE L++GLR REG+      +L GR+     E  R    
Sbjct: 306 --------APPPLNAGSGMPLDELLLVGLRRREGV------VLTGRDGQALEERWRPFLE 351

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVI 390
           QG +++           GM + + V+
Sbjct: 352 QGLLQKCSGRWQLRDPEGMALSNRVL 377


>gi|225457431|ref|XP_002262672.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 473

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 16/340 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFN--SHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRS 70
           +  Y+H PFC K+C YCDF   +    +    E      N+ Q    E++  +    P  
Sbjct: 57  VSAYIHLPFCRKRCHYCDFPIVALGSSFTPPPEDDPRILNYTQLICREIEATKPECYPTP 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTPSL+ P+ ++ I++ +   + +  + E+++E +P + +    +G  + G
Sbjct: 117 PLETVFFGGGTPSLVPPRLVSDIVEALRLKFGLCLDAEMSMEMDPGTFDAEKLKGLMELG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+SLGVQ+ +E+ LR  GR H   E   AI   ++      S DLI +LP QT   WE
Sbjct: 177 VNRVSLGVQAFQEEMLRGCGRAHGVKEIYEAIETVKSCGVENWSVDLISSLPHQTPEMWE 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             LQ  +     H+S+Y L +E+GT F  ++  G+  LPSE  + D Y +  +  S  G 
Sbjct: 237 ESLQLVIEAQPTHVSVYDLQVEQGTKFGILYTPGEFPLPSEIQSADFYRMASTTLSNAGY 296

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           + YEIS++   G E  HNL YW    + G G G+ S V      V  S  +  + ++  V
Sbjct: 297 NHYEISSYCKGGFECKHNLTYWENKPFYGFGLGSASYVG----GVRFSRPRKMKEYMGYV 352

Query: 309 RKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +     VV      + ++  A + +M+ LR   G+ +K +
Sbjct: 353 QSLETEVVGCGGNSVDAKDVAMDVVMLSLRTARGLDLKSF 392


>gi|260424610|ref|ZP_05732649.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister invisus DSM 15470]
 gi|260402529|gb|EEW96076.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister invisus DSM 15470]
          Length = 348

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 8/308 (2%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
           ++F+ +   EM+   +L   +   +++ GGGTPS++    +  I++ + + + +  N EI
Sbjct: 3   DSFLDALAQEMENKSKLFEDKLCDTVYLGGGTPSVLSGNQLKSIIEALHRYFHIYENAEI 62

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           T+E NP  +  +  +     GVNRIS+GVQ+  ++ L  +GR H A+EA  A++ A  + 
Sbjct: 63  TMEMNPCDMTESYLKNALVQGVNRISVGVQTNRDELLVKIGRRHTAAEAEKAVNRAFKLG 122

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  +S DL+  LP+QT+  +E  L+ A+   V H+S+Y L +E+GT F +M   G L  P
Sbjct: 123 FRNISIDLMCELPRQTVDDFEKTLKYAVHLPVTHMSVYSLILEEGTRFSQMASRGILARP 182

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
           SEN +  +Y     I   +G   YEIS+ +  G +S HN  YW+  DY+G+GP A SR  
Sbjct: 183 SENDSWAMYQAMCRILPHYGFERYEISSFARTGFQSAHNRKYWKLEDYLGLGPSACSR-- 240

Query: 288 VGSHR-VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +G  R   IS  +  E  L         V EK  LS +++ +EF  +GLR++EGI+ + +
Sbjct: 241 IGHERWENISNLRLYEERLAA----DEPVEEKISLSPKEEMEEFAFLGLRMKEGINSRKF 296

Query: 347 EMLAGRNL 354
               G+ +
Sbjct: 297 YQRYGKEI 304


>gi|195954007|ref|YP_002122297.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195933619|gb|ACG58319.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 349

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 20/323 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H P+C  KC YCDF S V +    ++N    F   ++ ++       I +++FGGGT
Sbjct: 7   LYIHIPYCSSKCHYCDFYSVVEK----EDN--SYFDILLEELKLYDFDYDIKTVYFGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS+ +P++  L    +     +S   E+T+E NP   E ++F+     G+NR+S GVQS 
Sbjct: 61  PSIFKPKHYNLFFKKLKNLIDLSKVEEVTMELNPKDYEKDDFKELYDIGINRLSFGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E  L +LGR H   +AI +I  A+   F  ++ D+I+ +P QT  ++  +++ A+S+  
Sbjct: 121 NEHHLLWLGRTHKKEDAIKSILYAKEAGFENINLDIIFGMPDQTKEEFLEDIETAISFEP 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLS Y L    GT  Y      D     +++A+  Y L +   +  G   YEISN +  
Sbjct: 181 THLSFYMLIYYPGTALY---SKKDEQKHEDDIAL-FYELLRK--TLKGYIHYEISNFAKK 234

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN+ YW Y +Y+G+GPGAHS+V+         I  + E+ LK         +  +
Sbjct: 235 EHESKHNMAYWEYKNYLGLGPGAHSKVEAFMFSNPKDINLYKENLLK-------KQLSLK 287

Query: 320 FLSSEQQADEFLMMGLRLREGIS 342
            L+ E+     ++MGLR  +G+ 
Sbjct: 288 ALNEEEHKKNKIIMGLRTIKGVD 310


>gi|317490540|ref|ZP_07949017.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|316910355|gb|EFV31987.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
          Length = 370

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 185/369 (50%), Gaps = 28/369 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCVK+C YCDF +        + E +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVKRCAYCDFATAAVPAGAPEIEAYVEDLSLQIRRKAKEGELGAVETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHVGLAGLSMLLYTLSLSMHLTDEVECTMEANPESLTERMVRDIWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR LGR H++ +A  AI  AR  F  +S DL+  +P Q+   +E  ++ A+   
Sbjct: 128 SFDDDVLRTLGRAHSSDDARRAIEAARTRFENVSVDLMCGIPGQSAESFEASVREAVRLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F      G+L  P ++V      +   +  + G   YE+++++ 
Sbjct: 188 ATHVSVYPLTIEPHTPFDAAVLAGELEEPDDDVEAAHMQIAARVLDSEGFERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A +  +    R+ +              K+G      
Sbjct: 248 PGFACRHNIAYWTGVPYLGLGRSAATMTQNAQRRMRV--------------KDGQVT--- 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQRQGFIERVQF 373
           + L   Q   E LM+G+R+  G+S +     A R  ++  E      +L+RQG +E  + 
Sbjct: 291 DDLDPRQMVAEDLMLGMRMTAGVSDEH----AARAAELLPEATTVLADLERQGLVEH-EG 345

Query: 374 SRLRCTQRG 382
            R R T+RG
Sbjct: 346 GRWRPTERG 354


>gi|297733622|emb|CBI14869.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 172/340 (50%), Gaps = 16/340 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFN--SHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRS 70
           +  Y+H PFC K+C YCDF   +    +    E      N+ Q    E++  +    P  
Sbjct: 57  VSAYIHLPFCRKRCHYCDFPIVALGSSFTPPPEDDPRILNYTQLICREIEATKPECYPTP 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTPSL+ P+ ++ I++ +   + +  + E+++E +P + +    +G  + G
Sbjct: 117 PLETVFFGGGTPSLVPPRLVSDIVEALRLKFGLCLDAEMSMEMDPGTFDAEKLKGLMELG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+SLGVQ+ +E+ LR  GR H   E   AI   ++      S DLI +LP QT   WE
Sbjct: 177 VNRVSLGVQAFQEEMLRGCGRAHGVKEIYEAIETVKSCGVENWSVDLISSLPHQTPEMWE 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             LQ  +     H+S+Y L +E+GT F  ++  G+  LPSE  + D Y +  +  S  G 
Sbjct: 237 ESLQLVIEAQPTHVSVYDLQVEQGTKFGILYTPGEFPLPSEIQSADFYRMASTTLSNAGY 296

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           + YEIS++   G E  HNL YW    + G G G+ S V      V  S  +  + ++  V
Sbjct: 297 NHYEISSYCKGGFECKHNLTYWENKPFYGFGLGSASYVG----GVRFSRPRKMKEYMGYV 352

Query: 309 RKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +     VV      + ++  A + +M+ LR   G+ +K +
Sbjct: 353 QSLETEVVGCGGNSVDAKDVAMDVVMLSLRTARGLDLKSF 392


>gi|296140464|ref|YP_003647707.1| oxygen-independent coproporphyrinogen III oxidase [Tsukamurella
           paurometabola DSM 20162]
 gi|296028598|gb|ADG79368.1| oxygen-independent coproporphyrinogen III oxidase [Tsukamurella
           paurometabola DSM 20162]
          Length = 391

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 167/357 (46%), Gaps = 10/357 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSIS 72
           S   G+Y+H PFC  +C YCDFN++      G  +   + ++   E+   R   G   + 
Sbjct: 17  SAPFGLYLHVPFCATRCGYCDFNTYTAGELGGSSSPQAWAEAIDGELALARATVGDVPVH 76

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+    +A +LD   +++    N EIT E+NP S     F+  R AG  R
Sbjct: 77  TVFVGGGTPSLLGGDGLAALLDTARRHFRFVDNAEITTESNPESTSPEFFRRLRDAGFTR 136

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS     L  L R H    A+AA   AR   F  ++ DLIY  P +T       L
Sbjct: 137 VSLGMQSAAAHVLTVLDRTHTPGRAVAAAKEARAAGFEHVNLDLIYGTPGETDADLAASL 196

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              L   VDH+S Y L +E GT   +  + G+L    ++V    Y          G   Y
Sbjct: 197 DAVLDAGVDHVSAYALIVEDGTALARRIRRGELPDTDDDVLARRYEQVDGALRGAGFDWY 256

Query: 252 EISNHSFLGAESL-HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           E+SN +   A    HN  YW   ++ G GPGAH  +  G+    I   KHP  +   V +
Sbjct: 257 EVSNWARSDAARCHHNELYWEGANWWGAGPGAHGHI-AGTRVWNI---KHPARYADAVGR 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNLQRQG 366
               +   E L++EQQ  E +M+ +R+R G+ +           D E  E NL R G
Sbjct: 313 GELPLAGHETLTAEQQHVEDVMLRVRMRSGLPLAVLRPAERERADAEAAEGNLDRVG 369


>gi|226501602|ref|NP_001152192.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           sll1917 [Zea mays]
 gi|195653683|gb|ACG46309.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           sll1917 [Zea mays]
          Length = 475

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 177/351 (50%), Gaps = 24/351 (6%)

Query: 22  YVHWPFCVKKCPYCDF-------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-- 72
           YVH PFC K+C YCDF       +S   R +  ++  I  ++  +  +R+++  R +S  
Sbjct: 58  YVHLPFCRKRCHYCDFPIIALGSSSAPSRGEAAEDPRIVDYVNLL--LREVSATRPVSDD 115

Query: 73  -----SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                ++FFGGGTPSL+ P+ +A +LD +   + +S+  E++IE +P + +    +    
Sbjct: 116 GVPLETVFFGGGTPSLVPPRLVATVLDALRARFGLSARPEVSIEMDPGTFDAARLKELVG 175

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEA--IAAIHLARNIFPRMSFDLIYALPKQTMT 185
            GVNR+SLGVQ+ +E  LR  GR H   E     AI  A       S DLI +LP QT  
Sbjct: 176 VGVNRVSLGVQAFQEDLLRACGRAHGVKEVHEAVAIVTACEGLQNWSMDLISSLPNQTEE 235

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            WE  L+  +     H+S+Y L IE+GT F +M+  G   LPS+  + + Y +     S 
Sbjct: 236 MWEESLRCTVDARPTHVSVYDLQIEQGTKFGQMYTPGVFPLPSDTESANFYRIASKRLSE 295

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G + YEIS++   G E  HNL YW+   +   G G+ S +    + V  S  +  + + 
Sbjct: 296 AGYNHYEISSYCKPGYECKHNLTYWQNRPFYAFGLGSASYI----NGVRYSRPRRTKEYA 351

Query: 306 KMVRKNGHAVVEKEFLSSE--QQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           + V+K        E  SS+    A + +M+ LR    + ++ +    G++L
Sbjct: 352 EWVQKLEDGTWRHESRSSDLKDMALDVVMLSLRTAWVLDLQSFSKSFGKSL 402


>gi|113955415|ref|YP_729946.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. CC9311]
 gi|113882766|gb|ABI47724.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CC9311]
          Length = 412

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 189/406 (46%), Gaps = 30/406 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           MT     S   Y+H PFC ++C YCDF           +       I+++L  +     L
Sbjct: 1   MTASAPRS--AYLHIPFCHRRCFYCDFAVVPLGDRANPFGGSGSGSIEAYLDLLSAEINL 58

Query: 66  T--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +  GP ++++++ GGGTPSL+ P  IA +L  +   +      EIT+E +P++ E  +  
Sbjct: 59  SPQGP-ALATVYVGGGTPSLLRPDQIAALLQQLKGRYGFQDGAEITLEMDPATFERRDLL 117

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-----LARNIFPRMSFDLIYA 178
               AGV R+SLG QS ++  L  LGR H   + + A H     L        S DLI  
Sbjct: 118 ALIAAGVTRVSLGGQSFDDVRLAALGRRHRRQDLLEACHWLQESLQVGELQSWSLDLIRN 177

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q   +WE +L++A++    H+S+Y L++E GT+F    K G+L LP E+ A D    
Sbjct: 178 LPDQGNLEWEAQLEQAVAVQAPHVSIYDLSVEPGTVFAWREKRGELALPEEDAAADRIAF 237

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           T       G   YEISN +  G  S HN  YW    +   G GA S    G         
Sbjct: 238 TTHRLRRAGYSRYEISNFARPGHASRHNRVYWSGVGWWAFGLGATS-APWGERMARPRTR 296

Query: 299 KHPESWLK-MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           +   SWLK   +K   ++++    +     D+ L++GLR  EG+ + D     G + +  
Sbjct: 297 EAYASWLKEQSQKLDSSLLQGS--AGSLALDDRLIVGLRCHEGVDLWDLARRCGWS-EQR 353

Query: 358 CERNL-----QRQGFIERVQFSRLRCTQR-----GMTMLDSVIANL 393
           C R+L     + Q F+ER    R  C  R     GM + + V+  +
Sbjct: 354 CSRDLSALEARWQPFLERGLLERFGCRWRLSDPEGMAVSNQVLVEV 399


>gi|124023699|ref|YP_001018006.1| oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus str. MIT 9303]
 gi|123963985|gb|ABM78741.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9303]
          Length = 436

 Score =  172 bits (436), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 166/338 (49%), Gaps = 18/338 (5%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
            Y+H PFC ++C YCDF       H    K      IQS+L  +Q    L  P  +++++
Sbjct: 13  AYLHIPFCHRRCFYCDFAVVPLGDHANGAKGSGSASIQSYLQLLQREIALVKPGPTLATV 72

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+    I  +LD + + + V    EIT+E +P+S +         AGVNR+S
Sbjct: 73  YIGGGTPSLLSSAQIGALLDQLRQRFGVQLGAEITLEMDPASFDQAYLAAVLAAGVNRVS 132

Query: 135 LGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEM 189
           LG QS ++  L  LGR H      EA   +H A         S DLI  LP Q +  W+ 
Sbjct: 133 LGGQSFDDAVLETLGRRHRRHHLLEACGWLHQAHQCGELKSWSLDLIQNLPGQELVAWKQ 192

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L  A+     HLS+Y L++E GT+F    + G+L LP +++A +    T  +    G  
Sbjct: 193 QLVEAIDTGSPHLSIYDLSVEPGTVFAWRQRRGELDLPDDDLAAEQMQTTSVLLRQAGFG 252

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G  S HN  YW    +   G GA S    G             +W+++  
Sbjct: 253 RYEISNYALPGHASRHNRVYWSGAGWWAFGQGATS-APWGERLARPRTRDGYCNWIEVQE 311

Query: 310 KNGHAVVEKEFLSSEQQA---DEFLMMGLRLREGISVK 344
             G   ++   ++++ +    DE L++GLR REG+ ++
Sbjct: 312 VEG---LDSSLVAAQARPLPLDEQLLVGLRCREGVDLE 346


>gi|2104798|emb|CAA70593.1| coproporphyrinogen III oxidase [Geobacillus stearothermophilus]
          Length = 321

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 172/319 (53%), Gaps = 10/319 (3%)

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+++E + +   L+ I K++  S   VE T EANP+ +     Q  + AGVNR+S 
Sbjct: 1   GGGTPTVLEMKQLDFFLESIYKHFRFSKGEVEFTFEANPNELSKEKLQLLKDAGVNRLSF 60

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  +  L+ +GR H   + +  I LA+ + F  +S DL+Y LP QT+ Q++ +L  A
Sbjct: 61  GVQTFHDSLLKAIGRTHCYDDVMRTISLAKEVGFDNISIDLMYGLPNQTLQQFQADLDIA 120

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            S  + H+S Y L IE  T+FY + + G L LPSE    ++Y         HG   YEIS
Sbjct: 121 FSPDIQHISAYSLIIEPKTIFYNLWRKGPLPLPSEEEEAEMYEGAMRQMELHGYQPYEIS 180

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G +S HNL YW   +Y GIG GAHS V+    RV I   K    ++  VR+ G  
Sbjct: 181 NYARPGFQSRHNLTYWNNEEYYGIGAGAHSYVER-VRRVNIGPIKQ---YIAKVRETGLP 236

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DI--ECERNLQRQGFIERV 371
             E   ++  +Q +E + +GLR  EG+S + +    GR++ D+     R    +G  E  
Sbjct: 237 YREIHQVTWMEQMEEEMFLGLRKTEGVSKQCFFEKFGRDVHDVFGAAIRAEHEKGLPEET 296

Query: 372 QFSRLRCTQRGMTMLDSVI 390
             + +R T+RG  + + V 
Sbjct: 297 A-THVRLTRRGRLLGNEVF 314


>gi|328907150|gb|EGG26916.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium sp. P08]
          Length = 350

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/335 (33%), Positives = 169/335 (50%), Gaps = 15/335 (4%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G   +S+IFFGGGTP+++ P  +  ++D I   W    N EIT EANP ++      G 
Sbjct: 26  AGQPPVSTIFFGGGTPTMLSPVQLGELVDHIRTLWGTDLNAEITTEANPETLSGEVLAGL 85

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
            KAG+NR+S+G+QS +E  L  L R H    A+    LAR + F  +S DLI+  P +++
Sbjct: 86  LKAGINRLSMGMQSADEFVLTVLDRRHRPGRAVEMAQLARQMGFDDVSLDLIFGAPGESL 145

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L  AL+   DH+S Y L IE+GT      + G+L +  E+   D Y L + I +
Sbjct: 146 DSWWHSLDVALTAEPDHISAYSLIIEEGTRLAGRIRRGELPMTDEDDLADKYLLAERILT 205

Query: 245 AHGLHAYEISN----HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
             G   YE+SN     +       HN+ YW   D+ G+GPGAHS +  G+    +   KH
Sbjct: 206 EAGYVNYEVSNWARPRNGRDHRCRHNMAYWLGHDWWGVGPGAHSHI-AGTRWWNV---KH 261

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P ++  ++R+    V   E L   Q+ +E +++ LRL +G+ + D   +         E+
Sbjct: 262 PATYRSLLRERKLPVDGYEVLDDVQRHEETVLLRLRLSDGLPMTDLPRVERMRAAKVVEQ 321

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            L   G IE     RL     G  + D +IA+L +
Sbjct: 322 GL---GTIEE---GRLVLNLSGRMVADRIIADLLI 350


>gi|327399062|ref|YP_004339931.1| oxygen-independent coproporphyrinogen III oxidase [Hippea maritima
           DSM 10411]
 gi|327181691|gb|AEA33872.1| oxygen-independent coproporphyrinogen III oxidase [Hippea maritima
           DSM 10411]
          Length = 365

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 188/356 (52%), Gaps = 25/356 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIF 75
           N +  Y H PFC KKCPYC F S  +R+     N I  ++   ++ +R     +++ +++
Sbjct: 2   NDIYFYFHIPFCYKKCPYCSFVSFEKRF-----NEIDGYVDAVIREIRGFNSDKTVKTVY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS+++   I  +L+ + K +    + EIT E  P  ++ N  +G +  G+NR+S+
Sbjct: 57  FGGGTPSILKLNQIERVLNEVYKRFRCDID-EITFETIPL-LKGNYLKGLKSLGINRLSI 114

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  ++ L+ LGR HN  E+++A+  A  + F  +S DLIY +  +T+ +   +L   
Sbjct: 115 GVQSFNDRKLKILGRIHNKKESLSAVEKALAVGFRNISVDLIYGVG-ETLDELMYDLDIT 173

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S+Y L+IE+G+ F+KM         +E    + Y     + S +G   YEIS
Sbjct: 174 CKLDIKHVSIYMLSIEEGSEFFKM----GFKSSNEEDIEEFYLKLCEVLSKNGFEQYEIS 229

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN-GH 313
           N S  G  S HN  YW   DY G G  A S   +   R+     K+  +  + V+   G 
Sbjct: 230 NFSKKGFRSKHNNAYWLGYDYKGFGVSASSF--LSGKRI-----KNSSNLYEFVKNPLGS 282

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            +VE+E L   + A E  ++GLRL+EGI +K ++   G  +D+E     +   FI+
Sbjct: 283 YIVEEE-LEGIELAKEMFILGLRLKEGIDLKVFKDRYG--VDVESLFKYEIDKFIK 335


>gi|126696835|ref|YP_001091721.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543878|gb|ABO18120.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9301]
          Length = 407

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 175/340 (51%), Gaps = 20/340 (5%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
            YVH PFC ++C YCDF      + V   K      +Q +L  + + +  +     +S+I
Sbjct: 8   AYVHIPFCHRRCFYCDFAVIPLGNEVETLKGYGSKTVQEYLQFLYKEILSIKHKSPLSTI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS+++P  I  +++   +N+ +    EIT+E +P+S   ++  G+  AG+NR S
Sbjct: 68  YIGGGTPSILDPAQIKELVNLFKENYGIDYGAEITMEVDPASFTQDDLFGFINAGINRFS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAI-AAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           LGVQS   Q L+  GR H   +A+ + + L R     +    S DLI  LP     +W+ 
Sbjct: 128 LGVQSFNNQILQKSGRRHLKEDAVKSCLWLKREYDNGLIKSWSLDLIQNLPLSGFKEWQD 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A++++  HLS+Y L IE GT+F K+   G L LPS+  A      T  I    G  
Sbjct: 188 DLKKAITFSPPHLSIYDLNIEDGTVFKKLINLGKLKLPSDEEAFRNSESTHLILKKSGYS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN+     +S HN  YW    +   G G+ S    G       + K  + W  + R
Sbjct: 248 RYEISNYCLPRHQSRHNRVYWSGLGWWSFGQGSTSS-PWGEKFTRPRVSKEYKEW--VTR 304

Query: 310 KN----GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           ++      ++  K F+  E   DE +M+GLRL+EG+ +K+
Sbjct: 305 QDEFNLDSSLTNKGFVYKE--LDEKIMLGLRLKEGVDIKE 342


>gi|171911723|ref|ZP_02927193.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verrucomicrobium spinosum DSM 4136]
          Length = 341

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 163/295 (55%), Gaps = 9/295 (3%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EI 108
           F+++ L E++ + Q T P +  +I+ GGGTP+ +  +++A +L G+ +    S +V  E 
Sbjct: 4   FVKAVLRELE-LHQRTMPVTARTIYLGGGTPTALSEKHLADLLTGLKEAAAASGSVLDEF 62

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
            +EANP +V  +  +  ++ GV RISLGVQ+ +E +L+ LGR+H   EA     + R   
Sbjct: 63  GLEANPKTVSASKARLLKELGVTRISLGVQAWDEPTLKLLGRDHAPDEAAETFQILREAG 122

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            P ++ DL++++P QT+  W   L++ LS   DH+S Y LT E+ T F    + G ++  
Sbjct: 123 IPSLNVDLMFSIPGQTLKVWNAGLEKTLSLGSDHVSCYNLTYEEDTEFLSQLQAG-VLDT 181

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            E+   D +  T  I  A G   YEISN++  G  S+HN  YWR  DY+G+GP A S V+
Sbjct: 182 DEDRDADHFQSTMDILEAAGFEHYEISNYARPGHRSVHNQAYWRGADYLGLGPSASSTVQ 241

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
               RV          ++++V++    + E E LS  Q   E + + LR  EG+S
Sbjct: 242 ----RVRWKNISDTAGYIRLVQEGRLPITESEELSDRQWLIERVALELRTAEGMS 292


>gi|310778063|ref|YP_003966396.1| coproporphyrinogen III oxidase, anaerobic [Ilyobacter polytropus
           DSM 2926]
 gi|309747386|gb|ADO82048.1| coproporphyrinogen III oxidase, anaerobic [Ilyobacter polytropus
           DSM 2926]
          Length = 359

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 149/282 (52%), Gaps = 10/282 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+ KC YCDF S  +     +  +++    E++   +        +++FGGG
Sbjct: 4   AIYIHIPFCINKCQYCDFLS-FKSTPYKRREYVEYLKKEIKLYPEF----EYDTVYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P  +  IL+ +     +  + E+T+E NP SV++   + +R AG+NR+S+GVQS
Sbjct: 59  TPSLLDPFEVKEILELL----QIREDSEVTLEVNPKSVDLEKLRAFRNAGINRLSIGVQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ +GR H   EA      AR   F  +S DL+++LP Q++     +L +     
Sbjct: 115 FDPYYLKLIGRLHTGIEAEEIYRDARKAGFENVSLDLMFSLPGQSIEDVRKDLVKIAKLR 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L  E+GT  Y+    GDL      +  ++Y L      + G   YE+SN S 
Sbjct: 175 PEHISIYSLIWEEGTPLYEKLLKGDLEETDNEIEAEMYELIIDFLKSKGYIHYEVSNFSL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            G E+ HN  YW   +Y+G G GA   +    ++ A++ E +
Sbjct: 235 PGKEARHNTKYWENKEYLGAGLGASGYIGNQRYKNAVNFEDY 276


>gi|42525191|ref|NP_970571.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bdellovibrio bacteriovorus HD100]
 gi|39577402|emb|CAE81225.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bdellovibrio bacteriovorus HD100]
          Length = 390

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 196/391 (50%), Gaps = 22/391 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + GVY+H P+C+++C YCDF ++ +   +  + +++    E++   +   P+S+ +I+FG
Sbjct: 2   AFGVYIHIPYCIQRCTYCDFATYEQSKILPPDQYVELLFKEIRQKHRYYTPQSLDTIYFG 61

Query: 78  GGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPSLI    I  I+  + +  +T   + EITIE NP++V     + Y   G+NR S+G
Sbjct: 62  GGTPSLIPANLIVAIIKELGRYGFTTRPDTEITIEINPATVSKEKLKTYLDNGINRFSVG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            Q+ +++ L+ + R H+A + +  + L R      SFD+++ALP QT+     +++ A+ 
Sbjct: 122 AQTFDDRLLKMVHREHSAKQTLETLDLLRAHGVNFSFDILFALPSQTVEGLRRDVEIAVE 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y LT+  G    K         P ++  V+++++     +  G   YE+SN 
Sbjct: 182 QGAKHISPYCLTVPDGHPLSKGR-------PIDDEQVEMFDIIADELTRKGFQQYEVSNF 234

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV---GSHRVAI-SIEKHPESWLKMVRKNG 312
           +  G ES HN+ YW    Y  +G  +HS  K    G+    I SI ++ +  L    +  
Sbjct: 235 ALPGFESRHNMLYWVDEPYWSLGLSSHSYSKESAWGTRYWNINSINEYQKQILAFDGQEF 294

Query: 313 HAVV------EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQ 363
            + V      + E L   Q   +F    +RL  G++V+  +    +N+    ++  +NL+
Sbjct: 295 DSPVRHLPSNQVEVLQMHQALTDFCHTSMRLMRGLNVEQLQAKFPQNVSEKVLQIMKNLE 354

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++ +I R        T+ G+ + + V   L 
Sbjct: 355 QKSWI-RFDNGHWSLTREGLVLSNRVFQELT 384


>gi|149918856|ref|ZP_01907342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
 gi|149820230|gb|EDM79647.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
          Length = 400

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 170/345 (49%), Gaps = 24/345 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT----------EMQWMRQL 65
           + +LG+YVH PFC + CPYCDF+  V R    +   +   ++          + +W  +L
Sbjct: 7   AEALGLYVHVPFCARACPYCDFDFEVLRQTESETGALAPRVSAWLEGLEAERDERWAGEL 66

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQ 123
            G R + +++ GGGTPS I    +  +   +   + +  ++  E+T+E NP  ++     
Sbjct: 67  AG-RRVDTLYLGGGTPSAIGVAGLERLFAWVESRFALRLAALDEVTVELNPEHLDAALLA 125

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
               AGV+R+SLGVQSL    LR LGR H   +A+A +  A       S DL+     QT
Sbjct: 126 RLVDAGVSRVSLGVQSLAASGLRELGRVHAREQALACVRRAHGAGLGTSADLMLGWRGQT 185

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                 E+   L     HLS+Y LTIE+ T +  +   G   LP ++V  +L  + +   
Sbjct: 186 PAGLRREIDALLEAGAGHLSIYALTIEEDTPWPGLVARGQRELPDDDVQAELLQVAEGHL 245

Query: 244 SAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHP 301
           +A G   YE+++++   GAE++HN  YWR+ D + +GP A S R  +   R  ++   +P
Sbjct: 246 AARGFRHYEVASYAAPGGAEAIHNGKYWRWRDVVALGPSAVSVRHGLVEGRGVVARRMNP 305

Query: 302 ---ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              E WL        A  E E L  E  A E L +GLR  EG+ V
Sbjct: 306 RGLERWLS------GAAPEYERLEGESAAAEGLWLGLRRLEGVDV 344


>gi|297566420|ref|YP_003685392.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           silvanus DSM 9946]
 gi|296850869|gb|ADH63884.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           silvanus DSM 9946]
          Length = 371

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 183/379 (48%), Gaps = 24/379 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +YVH PFC   CPYCDF+  VRRY    E +++    E   +  +  GP  + +++ GGG
Sbjct: 4   LYVHVPFCPTLCPYCDFHV-VRRYGGVVEAYLERLAEEAAALYERFPGP--LETLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +   +   W V S  E+T+EANP ++     +  +  GVNR+SLGVQS
Sbjct: 61  TPSFLRNRELEQLFRALP--WNVPSIHEVTMEANPGTLNPERLELLKDLGVNRLSLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L  LGR H    A+ A+ ++     R S DLI  LP Q       +L+ A +  V
Sbjct: 119 FQDGVLESLGRAHGRKGALRAVEMSLQAGFRTSIDLILGLPGQDFA---ADLREAAALGV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L IE GT F       D     E++    +++ + +  A G   YE+SN +  
Sbjct: 176 GHVSAYTLQIEPGTPFAARGVRLD-----EDLEAAAFDMAEQVLGAVGFVRYEVSNFAKP 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEK-HPESWLKMVRKNGHAVVE 317
           G ES HN  YWR G +  +GP A      G+  R   S+   +P     + R        
Sbjct: 231 GQESAHNQVYWRAGFWGALGPAAVGHYPQGAEDREVYSVRATNP----PLPRWRAGEAPS 286

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFS 374
            E ++  + A E LM+GLRL EG+ V + E   G  L    E   R L+ Q  +   +  
Sbjct: 287 LEVITPLEHAREALMLGLRLCEGVDVNEIEQRTGLELWERLEAVVRELEGQELL-WARGK 345

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R+   + G+ +L  +I  L
Sbjct: 346 RIGVARAGVAILHRIILRL 364


>gi|239622054|ref|ZP_04665085.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515245|gb|EEQ55112.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 385

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 170/361 (47%), Gaps = 41/361 (11%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S++FFGGGTP+++  +++  +LD + K W ++ + EIT EANP +V           G 
Sbjct: 16  VSTVFFGGGTPTILAARDLVAMLDAVRKIWGIAPDAEITTEANPDTVNEYYINELAAGGF 75

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            R+S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   
Sbjct: 76  TRVSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTS 135

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  
Sbjct: 136 VTTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEW 195

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIE--------- 298
           YE+SN +  G ES HNL YWR  D+ G+GPGAHS    V    H  + S+          
Sbjct: 196 YEVSNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYNAVTEADHPQSASLTAPAGGGCPA 255

Query: 299 ------------------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
                              HP  W   + +N     + E ++ E+  +E +M+GLRL EG
Sbjct: 256 DAGLGVVSVSHGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHEG 315

Query: 341 I-------SVKDWEMLAG----RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +       ++ D  M +     R + ++    +  +G I      R+  T+RG  + DSV
Sbjct: 316 LDLDRINRAINDAGMSSTPQTLRTVSVDQLAPMVSEGLITVSDNHRVVPTRRGRLLNDSV 375

Query: 390 I 390
           I
Sbjct: 376 I 376


>gi|291296099|ref|YP_003507497.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           ruber DSM 1279]
 gi|290471058|gb|ADD28477.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           ruber DSM 1279]
          Length = 384

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 191/379 (50%), Gaps = 29/379 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   CPYCDF+  VRRY    E +++    E + +  Q  GP  +++++ GGG
Sbjct: 9   LYLHVPFCPTICPYCDFHV-VRRYGDVVEAYLKRLAQEARGLFEQHPGP--LTTLYLGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  +   +   W + +  E+T+EANP ++     +  R+ GVNRISLGVQS
Sbjct: 66  TPSFLRSHELEALFRALP--WNIEA-AEVTLEANPGTLNPERLRLLRELGVNRISLGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L+ LGR H    A+ A+ ++     R S DLI  LP Q       +L +A +  V
Sbjct: 123 FQDSVLKTLGRAHGRIGALRAVEMSLEAGFRTSIDLILGLPGQDAE---ADLAQAAALGV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y L +E GT F         + P  +     + L Q +    GL  YE+SN +  
Sbjct: 180 EHVSAYTLQVEPGTPFALKG-----LAPDPDAEAQAFELAQHLLGRAGLTRYEVSNFARP 234

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHP-ESWLKMVRKNGHAVVE 317
           G ES HNL YWR   + G+GPGA  ++  +  H  A+     P   WL+    +      
Sbjct: 235 GGESRHNLAYWRNAFWGGLGPGATGQLAGLEPHIFAVRYTNPPLPRWLQGEEPS------ 288

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
            E +S  +   E LM+GLRL +G+ ++  E  +G  +    E  +Q+   QG++  V+  
Sbjct: 289 LEPISRLEHVKESLMLGLRLAQGVDLELLEQRSGLEVWPALEPAVQQLSSQGWLV-VEQK 347

Query: 375 RLRCTQRGMTMLDSVIANL 393
           R+R T   +  L  +I  L
Sbjct: 348 RIRATD--LNTLHPIILQL 364


>gi|315609042|ref|ZP_07884012.1| coproporphyrinogen dehydrogenase [Prevotella buccae ATCC 33574]
 gi|315249246|gb|EFU29265.1| coproporphyrinogen dehydrogenase [Prevotella buccae ATCC 33574]
          Length = 372

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 184/378 (48%), Gaps = 14/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC  +C YC F S  R    G +  +  +   EM+ MR+   P    +I+ GG
Sbjct: 3   GLYIHIPFCESRCIYCGFYSTTR---TGLRRRYADALCREME-MRRGEMPGPPDTIYLGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  + D I K +      EIT+E NP  V  +      +  VNR+S+G Q
Sbjct: 59  GTPSTLGGELLGRVFDYIYKVYGPCEG-EITLECNPDDVTDDFCHALARLPVNRVSMGAQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  +  LRFL R H+A+E + A+  L R     +S DL++  P +T   W+ ++  AL  
Sbjct: 118 TFSDARLRFLHRRHSAAEVVTAVERLRRADIRNISLDLMFGFPGETPADWQTDIDNALLL 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLS Y L  E+GT  ++M   G++    E+V++ +Y++     +  G   YEISN +
Sbjct: 178 HPEHLSAYSLMYEEGTPLHRMLTRGEVEEIDEDVSLHMYDMLIDRLTTAGYEHYEISNFA 237

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G+G  AHS           +++ + E+      + G    E
Sbjct: 238 LPGHRSRHNSSYWHGVPYVGLGASAHSYSGTARSWNVDNLQAYLEAI-----EAGRLPSE 292

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS--R 375
            E L    + ++ +   LR REGI++       G  L     +  Q Q  +  +Q     
Sbjct: 293 SEKLDLTTRYNDLITTALRTREGIALDAMRAEFGPALYGYMMQQAQNQLALGLLQTDGRS 352

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T++G+ + D+V+  L
Sbjct: 353 LSLTRKGLYVSDAVMVEL 370


>gi|284053503|ref|ZP_06383713.1| coproporphyrinogen III oxidase [Arthrospira platensis str. Paraca]
 gi|291568296|dbj|BAI90568.1| coproporphyrinogen III oxidase, anaerobic [Arthrospira platensis
           NIES-39]
          Length = 429

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 173/350 (49%), Gaps = 34/350 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF   V   +   EN      ++     E+   R    P  + +
Sbjct: 15  AAYVHIPFCRRRCYYCDFAVSVVGDRRHGENSGMIQEYVNFLCEEIVNQRHFGLP--LKT 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+  Q    ++  I+ +  ++S+ EI++E +P + ++   QG+  AG NR+
Sbjct: 73  VFFGGGTPSLLSVQQFDRLMKTISDHLGIASDAEISVEMDPGTFDLGKLQGFVAAGANRV 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ ++  LR  GR+H  ++   AI L   +     S DLI  LP QT    +  L 
Sbjct: 133 SVGVQAFQDDLLRLCGRSHTVADIWRAIDLINQVGVVNFSIDLISGLPHQTPEMMQESLD 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS    H+S Y L +E  T F + +K G+  LP +    +LY   Q   ++   H YE
Sbjct: 193 QVLSINPAHVSHYDLIVEPQTAFGRYYKPGEFPLPDDQTTANLYRQAQKCLTSRFKH-YE 251

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G E  HNL YW    Y G G GA S   VG +R  ++  +  + + + +R +G
Sbjct: 252 ISNYARPGFECRHNLVYWHNQPYYGFGMGAAS--YVGGYR--LTRPRTRDRYYQWLRSSG 307

Query: 313 HAVVEKEFLSSEQQAD-------------------EFLMMGLRLREGISV 343
                + +L S+  AD                   E LM+GLRL  G+ +
Sbjct: 308 GGGASESWLVSD-SADLPPAPTEAIAIILGSDILLETLMLGLRLASGVDL 356


>gi|297588459|ref|ZP_06947102.1| possible coproporphyrinogen dehydrogenase [Finegoldia magna ATCC
           53516]
 gi|297573832|gb|EFH92553.1| possible coproporphyrinogen dehydrogenase [Finegoldia magna ATCC
           53516]
          Length = 382

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 172/338 (50%), Gaps = 19/338 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF++  ++Y+   E F     TE+   +       I +I+ GGG
Sbjct: 18  GIYIHIPFCDYKCNYCDFSTMTKQYQRVDEYF-DLLQTEINMYKNPND--KIDTIYIGGG 74

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+  + I    + I   + +    E  IE NP  V     + Y+K G++RISLGVQS
Sbjct: 75  TPNLVNSKYIEKTYNLIDNCFNIQLK-EFAIECNPEFVTKEKIENYKKIGIDRISLGVQS 133

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +Q  +FLGR H  S+ + +  + R+    +S DLI+  P QT+   + +L        
Sbjct: 134 FNDQYNKFLGRGHKVSDVLKSFEIIRDYIDNISIDLIFGFPNQTLESLDNDLYYIEKLNP 193

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA---YEISNH 256
           +H+S Y + +E GT FYK + D   +  +++   D+Y     +   +GL     YEISN 
Sbjct: 194 NHVSRYNMILEPGTKFYKEYDD---INRNDDKEYDMY-----LKICNGLEKYKHYEISNF 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    ES+HN  YW+  +Y G G  +     +  HR       +P+ + K +  N   + 
Sbjct: 246 AKDKFESIHNKIYWKDENYYGFGLSSSGY--LNQHRYTNEFF-YPD-YKKKILNNEKPIS 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             E +  E++  EF++  +RL+EG+ +K ++   G NL
Sbjct: 302 FSEKIDLEKREFEFIITNMRLKEGLDLKVYQDKFGINL 339


>gi|288818591|ref|YP_003432939.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787991|dbj|BAI69738.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|308752182|gb|ADO45665.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
          Length = 381

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 187/371 (50%), Gaps = 22/371 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  KCPYCDF S      +  E++++  + E++  +  +   S+ +++ GGGT
Sbjct: 5   LYVHVPFCSYKCPYCDFVSFASS-AISHEDYLKLLIKELELYKGESF--SLKTLYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSLI P+     L  +  +  +S   E TIE NP +   + F+  +  G+NR+S+GVQS 
Sbjct: 62  PSLISPELYREFLKAL--DVDLSQLEEFTIECNPETYREDEFKKMKDLGLNRVSVGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +E+ LR LGR H   E+I  I  A +     +S DLIYA P QT+   + EL+      V
Sbjct: 120 KEKGLRMLGRRHTVKESIDCIMSAYHAGIENISIDLIYAYPNQTLKDLKEELRFIEDLPV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H S Y LT  + TLF  +   G L LP  +   D+Y       S+ G   YEISN +  
Sbjct: 180 KHASCYILTPYEDTLFGYLLSKGKLQLPDADKIADMYLFLVEKLSSLGFDHYEISNFAMP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HNL+YW   +++G+G  A S V+        +++K+  + + M RK  H     E
Sbjct: 240 GYECRHNLSYWLGKEFLGLGVSAWSFVRDVRFGNTKNLDKYA-TLVLMGRKPAHQC---E 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L  +++  + L   LR + GI  K++  L   +L            F E +    +R  
Sbjct: 296 VLKGKRKLQDTLFTRLRTKWGIP-KEYANLIPEDL----------SEFFE-ITNESIRLK 343

Query: 380 QRGMTMLDSVI 390
           + GM +++ ++
Sbjct: 344 EEGMLLINEIL 354


>gi|167755872|ref|ZP_02427999.1| hypothetical protein CLORAM_01389 [Clostridium ramosum DSM 1402]
 gi|167704811|gb|EDS19390.1| hypothetical protein CLORAM_01389 [Clostridium ramosum DSM 1402]
          Length = 364

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 199/383 (51%), Gaps = 27/383 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +NSL  Y+H PFC + C YCDF   V   +   ++++     E+Q +  +T P  + +I+
Sbjct: 3   TNSL--YLHIPFCEQICAYCDF-CKVFYNEHQADDYLAVLKHELQAL-NITEP--LKTIY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS +  + +  ++D I K +  S   E++IE NP S++       ++ GV+R+S+
Sbjct: 57  IGGGTPSSLNDEQLEWLMD-IIKPYISSETKEVSIEVNPESIDYYKLDILKRGGVSRLSI 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GV++  +  L+ + R H   +    I  AR I F  +S DL+Y LP QT+T  + +L + 
Sbjct: 116 GVETFNDILLKKINRQHTTIQVERIIDYARKIGFNNISIDLMYGLPNQTITDIKNDLAKV 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               ++H+S Y L +E  T+     K+ +     E V   +  L +      G H YEIS
Sbjct: 176 RQLPIEHISYYSLILEDHTVL----KNLNYQPLDEEVESKITQLIEESLEQIGFHKYEIS 231

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ESLHNL YW+Y +Y GIG GA  ++        I   ++  ++L+  R+N   
Sbjct: 232 NFAKTGYESLHNLAYWQYDNYYGIGVGASGKID----DCLIEHNRNLNAYLR--RQN--- 282

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDI---ECERNLQRQGFIER 370
            + K   S E+     LMM LRL +G+ +K++E   G R +D+     +++L+ +  +  
Sbjct: 283 TITKMINSKEETMFNHLMMSLRLVKGLDLKEFEKRYGLRAVDVYQTAIDKHLKMKTLV-- 340

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           ++   L  T   + +L+ ++ + 
Sbjct: 341 IENDYLHATSESIKLLNEILIDF 363


>gi|15805169|ref|NP_293856.1| coproporphyrinogen III oxidase [Deinococcus radiodurans R1]
 gi|6457795|gb|AAF09719.1|AE001875_5 coproporphyrinogen III oxidase, putative [Deinococcus radiodurans
           R1]
          Length = 388

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 196/384 (51%), Gaps = 39/384 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFG 77
           +YVH PFC   CPYCDF+   R     Q   ++ +L  ++             + +++ G
Sbjct: 18  LYVHVPFCPSICPYCDFHVLTR-----QAGLVERYLERLEQEAAELAAAYAVDLDTVYLG 72

Query: 78  GGTPSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTPS +    +  +++ + ++  W  + N   T+E NP +V       +R  G +R S+
Sbjct: 73  GGTPSFLRDHELRALVESVQRHLGWGRAEN---TLEINPGTVSTERAALWRSLGFDRASV 129

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           GVQSL++ +L+FLGR H+A +A  A+   +A++   R+S DLI A+P Q +   + ++  
Sbjct: 130 GVQSLDDATLKFLGRRHDARQARDAVSRLIAQDF--RVSGDLITAVPGQPL---DSDIHG 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +   V H+S Y LTIE GT F +     D     E+   + +  T+ + + HG   YE+
Sbjct: 185 LVELGVGHVSAYTLTIEPGTEFARRGVQVD-----EDAEREGFERTEELLAGHGFSRYEV 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEK---HPESWLKMVR 309
           SN++  G ES HNL+YW+   Y+G+GPGA     V +    A+++ +   H   WL  V 
Sbjct: 240 SNYARAGQESRHNLSYWQGKTYLGLGPGAAGHYPVPTPGADALTLRRTNPHLHDWL--VG 297

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           + G    E   +   +   + L MGLRLR G+ + D    +G ++       ++RQ   G
Sbjct: 298 QQG----ETLLVDPHEYVTDALFMGLRLRRGLDLADLTRRSGVDVAGRYGLVIERQVRLG 353

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            +E    + LR T +G  +L+ ++
Sbjct: 354 LLEH-SGTNLRATAQGWWVLNRIV 376


>gi|291084751|ref|ZP_06541863.2| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 197

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/192 (42%), Positives = 123/192 (64%), Gaps = 1/192 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLT 208
               HLS YQLT
Sbjct: 186 LNPPHLSWYQLT 197


>gi|288926556|ref|ZP_06420474.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccae D17]
 gi|288336698|gb|EFC75066.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccae D17]
          Length = 372

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 180/377 (47%), Gaps = 12/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YC F S  R    G        L     MR+   P    +I+ GGG
Sbjct: 3   GLYIHIPFCESRCIYCGFYSTTR---TGLRRRYADALCREMEMRRREMPGPPDTIYLGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  + D I K +      EIT+E NP  V  +      +  VNR+S+G Q+
Sbjct: 60  TPSTLGGELLGRVFDYIYKVYGPCEG-EITLECNPDDVTDDFCHALVRLPVNRVSMGAQT 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  LRFL R H+A+E + A+  L R     +S DL++  P +T   W+ ++  AL   
Sbjct: 119 FSDARLRFLHRRHSAAEVVTAVERLRRADIRNISLDLMFGFPGETPADWQTDIDNALQLH 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L  E+GT  ++M   G++    E+V++ +Y++     +A G   YEISN + 
Sbjct: 179 SEHLSAYSLMYEEGTPLHRMLTRGEVEEIDEDVSLHMYDMLIDRLTAVGYEHYEISNFAL 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+G  AHS           +++ + E+      + G    E 
Sbjct: 239 PGHRSRHNSSYWHGVPYVGLGASAHSYSGTARSWNVDNLQAYLEAI-----EAGRLPSES 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS--RL 376
           E L    + ++ +   LR REGI++       G  L     R  Q Q  +  +Q     L
Sbjct: 294 EKLDLTTRYNDLITTALRTREGIALDAMRAEFGPALYGYMMRQAQSQLALGLLQTDSRSL 353

Query: 377 RCTQRGMTMLDSVIANL 393
             T++G+ + D+V+  L
Sbjct: 354 SLTRKGLYVSDAVMVEL 370


>gi|260642797|ref|ZP_05417345.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides finegoldii DSM 17565]
 gi|260620486|gb|EEX43357.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides finegoldii DSM 17565]
          Length = 335

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 174/328 (53%), Gaps = 10/328 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +I+FGGGTPS +E ++   I D I +++ ++   EIT+EANP  +     +      
Sbjct: 10  DIETIYFGGGTPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLP 69

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP++T  +WE
Sbjct: 70  FNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPEETKERWE 129

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G 
Sbjct: 130 NDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGF 189

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS   +       SI    ++++K +
Sbjct: 190 EHYEISNFCRPGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGI 245

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQ 365
            ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C++      + 
Sbjct: 246 EEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKN 304

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +E      LR T+ G+ + DS++++L
Sbjct: 305 GKLEEYN-GALRLTREGIFISDSIMSDL 331


>gi|328914607|gb|AEB55440.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlamydophila psittaci 6BC]
          Length = 375

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 175/339 (51%), Gaps = 14/339 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTE-MQWMRQLTGP 68
           M   G + L +Y+H+PFC KKC YC F  +   Y     N +  + L E +Q +  +   
Sbjct: 1   MLMNGKSPLALYIHFPFCSKKCHYCSF--YTIPYNSESVNLYCNAILQEGLQKLSTIKDT 58

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             I ++F GGGTPSLI P  +  I+  +A +       EIT+EANP  +     +     
Sbjct: 59  HFIDTVFLGGGTPSLIPPHYLHNIIQTLAPHAQ-----EITLEANPEDLSEVYLRELLLT 113

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
            VNRIS+G Q+  +  L+ LGR H+++ +I A+H    + +  +S DLIY LP Q++  +
Sbjct: 114 AVNRISIGAQTFHDPLLKALGRIHSSAASIDAVHRCYEHGYNNISIDLIYGLPTQSLADF 173

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L +AL+  + H+SLY LT++  T FYK  +     + ++++   +    + + ++ G
Sbjct: 174 IADLHQALTLPISHISLYNLTLDPHTSFYKHRRILASSIANDDILAAMSLSAEELLTSRG 233

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+++++   A+S HNL YW    ++G+G  A   +    H+V          +L+ 
Sbjct: 234 FSRYELASYAKPQAQSKHNLYYWTDKPFLGLGVSASQYM----HKVRSKNLSRISQYLRA 289

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           VRKN       E L   ++  E L + LRL EG   KD+
Sbjct: 290 VRKNLPVHESTESLPENERIKEALALRLRLTEGARWKDF 328


>gi|282859545|ref|ZP_06268650.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bivia JCVIHMP010]
 gi|282587773|gb|EFB92973.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bivia JCVIHMP010]
          Length = 383

 Score =  169 bits (428), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 200/389 (51%), Gaps = 22/389 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-----MRQLTGPRS-ISS 73
           G+Y+H PFC  +C YC F + + +    +EN  ++ LT+ Q       +++   ++ +S+
Sbjct: 3   GLYIHIPFCASRCIYCGFYATLTKNAAKREN--ENTLTQRQRYINAVCKEIGKQKAELST 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSN------VEITIEANPSSVEVNNFQGYRK 127
           I+FGGGTPS +  + +  I + I K +   +N       EITIE NP  +  +  Q  + 
Sbjct: 61  IYFGGGTPSQLTSEELVQIFEQINKTFLHHTNNGATQLKEITIECNPEDITEDFVQILKT 120

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
              NR+S+GVQ+  ++ L+FL R H +S+   AI L R++    +S DL++  P +T  +
Sbjct: 121 LPFNRVSMGVQTFSDERLKFLHRRHTSSKIPEAIQLLRSVGINNISIDLMFGFPNETQEE 180

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  ++++A++  V+H+S Y L  E+GT  Y M K   +    E    ++Y +        
Sbjct: 181 WIADIEKAIALNVEHISAYSLMYEEGTALYTMQKHQRVKQIDEEQYREMYEVLIDRLEKA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G  S HN +YW    YIGIG  AHS   + + R   +       ++ 
Sbjct: 241 GYEQYEISNFAKQGFRSQHNSSYWHNIPYIGIGAAAHS-YDLNTRRWNYA---DLTKYIN 296

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            + ++  A  E+E + +    ++ ++  LR +EG+++ ++E    R         ++  G
Sbjct: 297 AIEQDKPA-YEEETIDANTHYNDSIVTALRTKEGLNIAEFEEKYRRYFLTNAASYIE-NG 354

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++ R   +    T++G+ + D+++ +L +
Sbjct: 355 YL-RKNDTCYTITRKGLYISDTIMVDLII 382


>gi|33241725|ref|NP_876666.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae TW-183]
 gi|33236234|gb|AAP98323.1| coproporphyrinogen oxidase III oxygen-independent [Chlamydophila
           pneumoniae TW-183]
          Length = 381

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 173/320 (54%), Gaps = 16/320 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G   L +Y+H PFC KKC YC F  +   YK    +   + + + + +R+L   + 
Sbjct: 7   MLMNGKAPLALYIHIPFCTKKCRYCSF--YTIPYKSESVSLYCNAVIQ-EGLRKLAPIQE 63

Query: 71  ---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I ++FFGGGTPSL+ P ++  IL  +A +       EIT+EANP ++ V+  +  ++
Sbjct: 64  THFIETVFFGGGTPSLVSPLDLKRILKELAPHAR-----EITLEANPENLTVSYLRQLQE 118

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             +NRIS+GVQ+ ++  L+ LGR H++S AI A+   +N  F  +S DLIY LP Q++  
Sbjct: 119 TPINRISVGVQTFDDSILQLLGRTHSSSAAITALQECQNHGFSNLSIDLIYGLPTQSLEI 178

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +  +L +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + 
Sbjct: 179 FLSDLHQALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQ 238

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+++++     + HNL YW    ++G+G  A S+   G      S   H   +L+
Sbjct: 239 GFQRYELASYAKPDYPAKHNLYYWTDRPFLGLGVSA-SQYLHGERSKNYS---HISHYLR 294

Query: 307 MVRKNGHAVVEKEFLSSEQQ 326
            VRKN       E L  +++
Sbjct: 295 AVRKNLPTQETSEILPKKER 314


>gi|254525933|ref|ZP_05137985.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9202]
 gi|221537357|gb|EEE39810.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9202]
          Length = 407

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 176/339 (51%), Gaps = 20/339 (5%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
            Y+H PFC ++C YCDF      + V   +      ++ +L  + + +  +    S+S+I
Sbjct: 8   AYIHIPFCHRRCFYCDFAVIPLGNKVDTLEGYGSKTVKEYLNFLYKEILSIKHKSSLSTI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS+++P+ I  ++D   +N+ +    EIT+E +P+S   ++  G+  AG+NR S
Sbjct: 68  YLGGGTPSILDPKQIKELIDIFRENYGIDYGAEITMEVDPASFNQDDLYGFIHAGINRFS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEA-IAAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           LGVQS   Q L   GR H   +A  + + L R     +    S DLI  LP     +W+ 
Sbjct: 128 LGVQSFNNQILEKSGRRHLREDAEKSCLWLKREYDSGLIKSWSLDLIQNLPLSGYKEWQD 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A++++  H+S+Y L IE GT+F K+   G L LPS+  A      T  I    G  
Sbjct: 188 DLKKAITFSPPHISIYDLNIENGTVFKKLVNLGKLKLPSDEEAFRNSESTHLILKNSGYS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN+     +S HN  YW    +   G G+ S    G       + K  + W  ++R
Sbjct: 248 RYEISNYCLPRHQSRHNRVYWSGLGWWSFGQGSTSS-PWGEKLTRPRVSKEYKEW--VIR 304

Query: 310 KN----GHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +       +++ ++F+  E   DE +M+GLRL+EG+ +K
Sbjct: 305 QYEVDLDSSLINRDFVYKE--LDEKIMLGLRLKEGVDIK 341


>gi|16752659|ref|NP_444924.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae AR39]
 gi|8163419|gb|AAF73661.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Chlamydophila pneumoniae AR39]
          Length = 394

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 16/305 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G   L +Y+H PFC KKC YC F  +   YK    +   + + + + +R+L   + 
Sbjct: 20  MLMNGKAPLALYIHIPFCTKKCRYCSF--YTIPYKSESVSLYCNAVIQ-EGLRKLAPIQE 76

Query: 71  ---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I ++FFGGGTPSL+ P ++  IL  +A +       EIT+EANP ++ V+  +  ++
Sbjct: 77  THFIETVFFGGGTPSLVSPLDLKRILKELAPHAR-----EITLEANPENLTVSYLRQLQE 131

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             +NRIS+GVQ+ ++  L+ LGR H++S AI A+   +N  F  +S DLIY LP Q++  
Sbjct: 132 TPINRISVGVQTFDDSILQLLGRTHSSSAAITALQECQNHGFSNLSIDLIYGLPTQSLEI 191

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +  +L +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + 
Sbjct: 192 FLSDLHQALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQ 251

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+++++     + HNL YW    ++G+G  A S+   G      S   H   +L+
Sbjct: 252 GFQRYELASYAKPDYPAKHNLYYWTDRPFLGLGVSA-SQYLHGERSKNYS---HISHYLR 307

Query: 307 MVRKN 311
            VRKN
Sbjct: 308 AVRKN 312


>gi|237719986|ref|ZP_04550467.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
 gi|229450538|gb|EEO56329.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
          Length = 335

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 177/329 (53%), Gaps = 12/329 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +I+FGGGTPS +E ++   I D I +++ ++   EIT+EANP  +     +      
Sbjct: 10  DIETIYFGGGTPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLP 69

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE
Sbjct: 70  FNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGLPGETKERWE 129

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHG 247
            +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ ++D + +L + +  A G
Sbjct: 130 NDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTSLIEHLQKA-G 188

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN    G  S HN +YW+   Y+G GP AHS   +       SI    ++++K 
Sbjct: 189 FEHYEISNFCRPGKYSRHNTSYWKGISYLGCGPSAHSFDGMTREWNVSSI----DTYIKG 244

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---R 364
           + ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C++      +
Sbjct: 245 IEEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLK 303

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G +E      LR T+ G+ + DS++++L
Sbjct: 304 NGKLEEYN-GALRLTREGIFISDSIMSDL 331


>gi|15643923|ref|NP_228972.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Thermotoga maritima MSB8]
 gi|148270705|ref|YP_001245165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga petrophila RKU-1]
 gi|4981715|gb|AAD36242.1|AE001773_11 oxygen-independent coproporphyrinogen III oxidase, putative
           [Thermotoga maritima MSB8]
 gi|147736249|gb|ABQ47589.1| coproporphyrinogen III oxidase, anaerobic [Thermotoga petrophila
           RKU-1]
          Length = 374

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 171/336 (50%), Gaps = 15/336 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF---LTEMQWMRQLTGPRSISSI 74
            L VYVH PFC  KC YCDF      Y V  E F + F   L E+    ++     I ++
Sbjct: 2   KLAVYVHVPFCKSKCVYCDF------YSVVSEKFDEYFSHLLREIDLYEEVLSESEIKTV 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS++ P  + ++L+ + +     +  EITIE NP SVE    + Y++ G+NRIS
Sbjct: 56  YFGGGTPSVVPPSFLKMVLEKLERVSRGFTPDEITIEVNPESVETEKLKIYKQIGINRIS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+ ++  L+  GR +          +    F  ++FD I  LP +T    + + +  
Sbjct: 116 LGVQACDDTVLKNAGRLYKEETLKKKAKIVLEQFENVNFDFILGLPGETDITLKKDFRFL 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   H+SLY L +++ T  + + + G + LP E+     ++L        G   YEIS
Sbjct: 176 EEFPPQHVSLYLLEVDERTRLFDLIQKGLVELPEEDDVERRHDLFVEFLKERGFLRYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +SLHNL YWR  +Y+G+G  A   +    +  A  ++++ E   K     G  
Sbjct: 236 NFAKPGKKSLHNLFYWRNENYLGLGVSAGGHIGRFRYVNASDLKEYEEKITK-----GEL 290

Query: 315 VVEK-EFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             E     + E++A E + MGLR++EG+ +   ++L
Sbjct: 291 PYEYVHENTEEEEALETVFMGLRIKEGVELNRVKIL 326


>gi|329998595|ref|ZP_08303179.1| radical SAM domain protein [Klebsiella sp. MS 92-3]
 gi|328538614|gb|EGF64714.1| radical SAM domain protein [Klebsiella sp. MS 92-3]
          Length = 197

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 121/192 (63%), Gaps = 1/192 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAHYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLT 208
               HLS YQLT
Sbjct: 186 LNPPHLSWYQLT 197


>gi|262406870|ref|ZP_06083419.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_22]
 gi|262355573|gb|EEZ04664.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_22]
          Length = 335

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 172/328 (52%), Gaps = 10/328 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +I+FGGGTPS +E ++   I D I K++ ++   EIT+EANP  +            
Sbjct: 10  DIETIYFGGGTPSQLEKEDFEQIFDTIRKHYGLNHCQEITLEANPDDLSQEYLGMLSSLP 69

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE
Sbjct: 70  FNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPGETKERWE 129

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G 
Sbjct: 130 NDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGF 189

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS   +       SI    ++++K +
Sbjct: 190 EHYEISNFCRPGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGI 245

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQ 365
            ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C++      + 
Sbjct: 246 EEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKN 304

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +E      LR T+ G+ + DS++++L
Sbjct: 305 GKLEEYN-GALRLTREGIFISDSIMSDL 331


>gi|237714861|ref|ZP_04545342.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
 gi|229445186|gb|EEO50977.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
          Length = 337

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 172/328 (52%), Gaps = 10/328 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +I+FGGGTPS +E ++   I D I K++ ++   EIT+EANP  +            
Sbjct: 12  DIETIYFGGGTPSQLEKEDFEQIFDTIRKHYGLNHCQEITLEANPDDLSQEYLGMLSSLP 71

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE
Sbjct: 72  FNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPGETKERWE 131

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G 
Sbjct: 132 NDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGF 191

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS   +       SI    ++++K +
Sbjct: 192 EHYEISNFCRPGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGI 247

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQ 365
            ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C++      + 
Sbjct: 248 EEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKN 306

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +E      LR T+ G+ + DS++++L
Sbjct: 307 GKLEEYN-GALRLTREGIFISDSIMSDL 333


>gi|329942768|ref|ZP_08291547.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
 gi|332287362|ref|YP_004422263.1| putative coproporphyrinogen III oxidase [Chlamydophila psittaci
           6BC]
 gi|313847944|emb|CBY16940.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila psittaci RD1]
 gi|325507351|gb|ADZ18989.1| putative coproporphyrinogen III oxidase [Chlamydophila psittaci
           6BC]
 gi|328815028|gb|EGF85017.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
          Length = 373

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 14/335 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTE-MQWMRQLTGPRSIS 72
           G + L +Y+H+PFC KKC YC F  +   Y     N +  + L E +Q +  +     I 
Sbjct: 3   GKSPLALYIHFPFCSKKCHYCSF--YTIPYNSESVNLYCNAILQEGLQKLSTIKDTHFID 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSLI P  +  I+  +A +       EIT+EANP  +     +      VNR
Sbjct: 61  TVFLGGGTPSLIPPHYLHNIIQTLAPHAQ-----EITLEANPEDLSEVYLRELLLTAVNR 115

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G Q+  +  L+ LGR H+++ +I A+H    + +  +S DLIY LP Q++  +  +L
Sbjct: 116 ISIGAQTFHDPLLKALGRIHSSAASIDAVHRCYEHGYNNISIDLIYGLPTQSLADFIADL 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +AL+  + H+SLY LT++  T FYK  +     + ++++   +    + + ++ G   Y
Sbjct: 176 HQALTLPISHISLYNLTLDPHTSFYKHRRILASSIANDDILAAMSLSAEELLTSRGFSRY 235

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+++++   A+S HNL YW    ++G+G  A   +    H+V          +L+ VRKN
Sbjct: 236 ELASYAKPQAQSKHNLYYWTDKPFLGLGVSASQYM----HKVRSKNLSRISQYLRAVRKN 291

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                  E L   ++  E L + LRL EG   KD+
Sbjct: 292 LPVHESTESLPENERIKEALALRLRLTEGARWKDF 326


>gi|302830436|ref|XP_002946784.1| hypothetical protein VOLCADRAFT_42214 [Volvox carteri f.
           nagariensis]
 gi|300267828|gb|EFJ52010.1| hypothetical protein VOLCADRAFT_42214 [Volvox carteri f.
           nagariensis]
          Length = 428

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 157/276 (56%), Gaps = 14/276 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ----------ENFIQSFLTEMQWMRQL-TGPR 69
            Y+H PFC +KC YCDF        V             ++I + L E+   R++ +GP 
Sbjct: 2   AYIHLPFCKRKCFYCDFPVEAVGRDVSAPSAWEVEARMRSYIDTVLREIGSTRRIGSGP- 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++++FFGGGTPSL+ P  +AL+++ +   + V++N E+++EA+P + +V   + YR+ G
Sbjct: 61  -LTTVFFGGGTPSLVPPPLLALLMESLDARFGVAANAEVSLEADPGTFDVERLRQYRQLG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V R+S+GVQ+ +++ L   GR H+ ++ +AA+   +    P  S DLI  LP  T   W 
Sbjct: 120 VTRLSVGVQAFQQELLEACGRGHDLADVVAAVDAVQAAGMPSWSLDLISGLPGLTAEAWR 179

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             LQRA++ A DH+S+Y L +E+GT F +  + G L LP ++ AV++Y     +  A G 
Sbjct: 180 HSLQRAVAAAPDHVSVYDLQVEEGTPFSRWQRAGRLRLPPDDAAVEMYGEASELLRAAGY 239

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
             YE+SN++  G    HN  YWR   Y   G GA S
Sbjct: 240 EHYEVSNYARRGHRCSHNQVYWRGLPYYAFGLGAAS 275


>gi|282856805|ref|ZP_06266064.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pyramidobacter piscolens W5455]
 gi|282585315|gb|EFB90624.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pyramidobacter piscolens W5455]
          Length = 376

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/338 (33%), Positives = 176/338 (52%), Gaps = 17/338 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGP-RSISSIFF 76
           L +YVH PFC  KCPYC F S   R   GQ E ++     E++ ++   G   S S+++ 
Sbjct: 7   LSLYVHAPFCRSKCPYCAFYSFAPR--SGQMERWLACLAAELETIKSGLGEGESFSTVYI 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS + P  +   L G           E T+EANP SV+      ++  GV R+S+G
Sbjct: 65  GGGTPSYL-PLALWRKLLGALGKVPREPACEFTVEANPESVDEEKLALWKDFGVTRVSVG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+++ L+ + R H++++A+  + L      R+S DLI+ LP+QT+ +W   + + ++
Sbjct: 124 VQSLDDRELKTMARPHDSAQALRILELCMKKGFRVSADLIFGLPRQTLRRWHESMSKLVA 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V HLS+YQL IE G+ + +    G   LP       +Y   Q      GL  YEI++ 
Sbjct: 184 EGVTHLSVYQLMIEDGSFWGRCRPSG---LPD---GYPMYRWAQYYLPRQGLKQYEIASF 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YW+  D    GP A     +G  R A    +    W + + +NG + V
Sbjct: 238 AVPGFESRHNRAYWKRSDVYAAGPAAWG--FLGGVRFANC--RSLARWAERI-ENGQSPV 292

Query: 317 E-KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           E +E LS+ Q+A E  ++ LR  EGI  +++    G+ 
Sbjct: 293 EFREKLSAAQEASEAAILALRTSEGIHFEEFAARYGKR 330


>gi|288575081|ref|ZP_06393438.1| oxygen-independent coproporphyrinogen III oxidase
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570822|gb|EFC92379.1| oxygen-independent coproporphyrinogen III oxidase
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 390

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 172/331 (51%), Gaps = 16/331 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S  L VY+H PFC  KCPYC F S V R       ++ +  +E+  + +L+G      ++
Sbjct: 18  SEPLSVYLHVPFCRSKCPYCSFASSVPR-SGDVALYLSALESELAGLTRLSGGSLPARTL 76

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+++  +    ++D + +     S  E ++EANP S+   + + +R  G++RIS
Sbjct: 77  YIGGGTPTVLSVEEWTRLMDLLDRYIDRGSIEEFSVEANPESLSDGHLRFWRDRGISRIS 136

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQSL++  LR+LGR H+++EA  A+  +      +S DL++ L  QT+ +W   L+  
Sbjct: 137 IGVQSLDDDELRWLGRLHDSNEARRAVIASVASGFDVSGDLMFGLKGQTLRKWHRSLKAL 196

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV--AVDLYNLTQSITSAHGLHAYE 252
               V H+SLYQLT++  + + K         P E V      Y   Q      G   YE
Sbjct: 197 AELGVGHMSLYQLTLDNDSFWGKK--------PPEGVFDGYSHYRWAQWYLPRIGFDQYE 248

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           I++ +  G  SLHNL YW   + +G+GPGA   +    +    S+  + +S    VR +G
Sbjct: 249 IASFALEGHWSLHNLAYWNRDNVVGLGPGAWGYLNGLRYENDPSLAGYRDS----VRSSG 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            AVV  E +    +A E  ++ LR + GI +
Sbjct: 305 FAVVYSERIGGVAEASESAILALRTKWGIDL 335


>gi|149198936|ref|ZP_01875977.1| coproporphyrinogen III oxidase [Lentisphaera araneosa HTCC2155]
 gi|149137931|gb|EDM26343.1| coproporphyrinogen III oxidase [Lentisphaera araneosa HTCC2155]
          Length = 375

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 183/377 (48%), Gaps = 25/377 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   C YC   S V   K  ++ ++     E+     L    ++ +IF GGGT
Sbjct: 10  LYIHVPFCKNICDYCTLYSVVENSKEIRQQYLSKIQNELN--ASLEQLDNLKTIFIGGGT 67

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +L  I     +    E T+E NP+S+     Q  +  GVNR+S G QS 
Sbjct: 68  PNALSSDELEQLLHSIQ---ALKIPSEFTVECNPASITEEKLQLMQNYGVNRLSFGGQST 124

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++ + LGR     E   AI LA+   F R++ DLIYA+P QT+  W+ ++Q+ LS  +
Sbjct: 125 SRKTRKALGRRTGDVELFKAIDLAQKFGFKRINVDLIYAVPGQTLADWQYDVQQVLSQGI 184

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H S Y L +E+G    K  K+ D     +++AV++Y+L + +    GL  YE+SN++  
Sbjct: 185 RHFSAYSLILEEGAEITKRIKETD-----DDLAVEMYHLCEDLLKEAGLERYEVSNYAVP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HNL  W    Y+G+GP A S   +    +  + +   ++WL     NG      E
Sbjct: 240 GEECRHNLGIWHGAKYLGLGPAAASFDGL----LRWTQKADLKAWL-----NGEKAKLDE 290

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRL 376
               E+ A E L  G R + G   +    L G  +  E +  L +   QG +E    S +
Sbjct: 291 IPLKERVA-EVLAFGFRTKMGWQKELLHSLYGSEVLNEYKDILDKLVIQGLLEETA-SYI 348

Query: 377 RCTQRGMTMLDSVIANL 393
           R T++G+   D + + L
Sbjct: 349 RATEQGLLFADEIASVL 365


>gi|78779792|ref|YP_397904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9312]
 gi|78713291|gb|ABB50468.1| coproporphyrinogen III oxidase, anaerobic [Prochlorococcus marinus
           str. MIT 9312]
          Length = 407

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 16/336 (4%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            YVH PFC ++C YCDF      N     +  G +   +      + +  +     +S+I
Sbjct: 8   AYVHIPFCHRRCFYCDFAVIPLGNKVETLHGYGSKTVKEYLHYLSKEILSIKHKSPLSTI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS+++PQ I  ++D   +N+ V    EIT+E +P+S   ++  G+  AG++R S
Sbjct: 68  YVGGGTPSILDPQQIKELIDLFKENYGVDYGAEITMEVDPASFNEDDLYGFINAGISRFS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQWEM 189
           LGVQS   Q L+  GR H   +A  +    + +F        S DLI  LP     +W+ 
Sbjct: 128 LGVQSFNNQILQNSGRRHLREDAEKSCLWLKRVFDNGLIKSWSLDLIQNLPLSGFKEWQD 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L +A+++   H+S+Y L IE GT+F K+   G L +PS+  A     +T  I    G  
Sbjct: 188 DLNKAITFLPPHISIYDLNIENGTVFKKLVNLGKLEVPSDEEAFRNSEVTHVILKNSGYS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMV 308
            YEISN+     +S HN  YW    +   G G+ S    G       + K  + W ++  
Sbjct: 248 RYEISNYCLPRHQSRHNRVYWSGSGWWSFGQGSTSS-PWGEKLTRPRVSKEYKEWVIRQY 306

Query: 309 RKN-GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
             N   ++  K+F+  E   DE +M+G+RL+EGI +
Sbjct: 307 ELNLDSSLTNKDFVYKE--LDEKIMLGMRLKEGIDI 340


>gi|15618295|ref|NP_224580.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae CWL029]
 gi|15835913|ref|NP_300437.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
 gi|4376658|gb|AAD18524.1| Coproporphyrinogen III Oxidase [Chlamydophila pneumoniae CWL029]
 gi|8978752|dbj|BAA98588.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
          Length = 373

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 167/301 (55%), Gaps = 16/301 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---I 71
           G   L +Y+H PFC KKC YC F  +   YK    +   + + + + +R+L   +    I
Sbjct: 3   GKAPLALYIHIPFCTKKCRYCSF--YTIPYKSESVSLYCNAVIQ-EGLRKLAPIQETHFI 59

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P ++  IL  +A +       EIT+EANP ++ V+  +  ++  +N
Sbjct: 60  ETVFFGGGTPSLVSPLDLKRILKELAPHAR-----EITLEANPENLTVSYLRQLQETPIN 114

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQ+ ++  L+ LGR H++S AI A+   +N  F  +S DLIY LP Q++  +  +
Sbjct: 115 RISVGVQTFDDSILQLLGRTHSSSAAITALQECQNHGFSNLSIDLIYGLPTQSLEIFLSD 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + G   
Sbjct: 175 LHQALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQGFQR 234

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+++++     + HNL YW    ++G+G  A S+   G      S   H   +L+ VRK
Sbjct: 235 YELASYAKPDYPAKHNLYYWTDRPFLGLGVSA-SQYLHGERSKNYS---HISHYLRAVRK 290

Query: 311 N 311
           N
Sbjct: 291 N 291


>gi|256818925|ref|YP_003140204.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea DSM 7271]
 gi|256580508|gb|ACU91643.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea DSM 7271]
          Length = 383

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 193/383 (50%), Gaps = 20/383 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDF+      + G+   + +   E+ + +       + +I+ GGGT
Sbjct: 4   LYIHIPFCRRACYYCDFHFSTTLKRKGE--MVDALCEELIFRKGEAVGSELQTIYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-----SSVEVNNFQGYRKAGVNRISL 135
           PS++  + +  +   I  ++ V++  EIT+EANP     ++      +  R  G+NR+SL
Sbjct: 62  PSILSYEELQQLFRTIFTHYKVNTTAEITLEANPDDFFRATSPEQFLEQLRSLGINRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  E+ LR + R H  S+    + +A   F  ++ DLIY +P+ +  +W+  + +AL
Sbjct: 122 GVQSFFEEDLRLMNRVHTVSQVETLLQIAPQYFNNITIDLIYGIPRMSEERWQENINKAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+ + H+S Y LT+E+ T  YK    G +   S+  A   + +      A G   YE SN
Sbjct: 182 SFDIPHISAYALTVEEKTALYKFIATGKIAPISDEQAYTHFQMLIDTLEAEGFIQYEFSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               G  S +N  YW    Y+GIGP AHS   K  S  +A     H   +++ +++ G  
Sbjct: 242 FGKEGYFSRNNTAYWFGKLYMGIGPSAHSFNGKERSWNIA-----HNIKYIQQIQQ-GIL 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
             EKE L+   + +E ++  +R   GI +++   + G      L  + ++ L  +  +  
Sbjct: 296 PQEKEELTLNNRYNELIITRIRTMVGIDLEEVRTVFGEGYRQYLLQQAQKYLADELLV-- 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           ++ + L+ T++G  + D + ++L
Sbjct: 354 IEENHLKVTRKGRFLSDGIASDL 376


>gi|296273265|ref|YP_003655896.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097439|gb|ADG93389.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
          Length = 353

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 173/327 (52%), Gaps = 24/327 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+V R+ + Q  ++++   ++ + +        I ++F GGG
Sbjct: 3   LYIHIPFCDSKCFYCAFNSYVDRFHLKQ-TYMKAIEKQLIYDIEHYLKDEKIETVFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ +    I   I+    +  N EIT EANP+S      QG R  GVNRIS GVQS
Sbjct: 62  TPSCVDFKEYENIFRIISP--YLIENCEITSEANPNSATKEWLQGMRDLGVNRISFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L++L R HN++ AI+AI  A+ I F  ++ D+IY +      + + +        
Sbjct: 120 FNDKKLKYLNRAHNSNSAISAIQNAKCIGFNSINCDIIYGVQGDNFEKLKYDFNMINDQN 179

Query: 199 VDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+S Y LT+E+GT F+ K H    + +  E ++  L++  + +    G   YEISN S
Sbjct: 180 IDHISAYSLTLEEGTKFFNKSH----VKIDDEELSYKLFDYLKGL----GYEQYEISNFS 231

Query: 258 -FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                +S HN  YW Y +Y+GIG GA   V    +    +IE++ E+ +           
Sbjct: 232 KSKKTQSKHNFGYWEYTNYLGIGTGAVGFVDNFRYYPNKNIEQYIENPISY--------- 282

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISV 343
           EKE++       E +++GLR   G+++
Sbjct: 283 EKEYMDEVDIKTEKVLLGLRSNVGVNL 309


>gi|283769567|ref|ZP_06342463.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bulleidia extructa W1219]
 gi|283103835|gb|EFC05221.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bulleidia extructa W1219]
          Length = 363

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 34/386 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            S  +Y+H PFC   C YCDF +HV         ++++   E++  +    P ++ +I+ 
Sbjct: 2   TSKALYLHVPFCAHICAYCDF-AHVGYCSSLVNQWLEALKIEIEDKKV---PENLETIYL 57

Query: 77  GGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP  +   E + + ++LD   +        E TIE NP  + +   +   + G+NR 
Sbjct: 58  GGGTPVSLQEDELEKLLILLDPYCQKIK-----EYTIEINPEVMTLEKAKICHRHGINRA 112

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G QS +++ L+ + R H+ +E    I   + +     S DL+Y+LP QTM  ++  + 
Sbjct: 113 SIGFQSSDKRLLKLMDRQHDYTEVQEMIEFLKKVGITNYSLDLLYSLPGQTMELFQQSVN 172

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAY 251
            AL+    HLSLY LTIE  TLF +       + P E ++  D+Y    +   + G   Y
Sbjct: 173 DALALEPKHLSLYSLTIEPNTLFARKG-----LKPLEADLEADMYEWICAYLPSQGYDHY 227

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G ES HN  YW Y D+IG+  GA  +     +  + ++ ++ ++ L+     
Sbjct: 228 EISNFAKKGFESRHNQMYWHYEDFIGLSCGASGKENHERYDKSKNLREYLKNPLE----- 282

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGF 367
                +K  L  E +  E +MMGLRL+EGI + DW+     N+    D   +++L     
Sbjct: 283 ----YKKIPLGKEDEQFESIMMGLRLKEGIDLLDWKEKYQENMVEYYDKAFQKHLSNGNL 338

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           +  ++ + +RCT++G  +L S++ + 
Sbjct: 339 V--LEGTYVRCTKKGFPILQSILVDF 362


>gi|237734840|ref|ZP_04565321.1| coproporphyrinogen III oxidase [Mollicutes bacterium D7]
 gi|229382168|gb|EEO32259.1| coproporphyrinogen III oxidase [Coprobacillus sp. D7]
          Length = 374

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 202/391 (51%), Gaps = 27/391 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N +    +NSL  Y+H PFC + C YCDF   V   +   ++++     E+Q +  +T 
Sbjct: 5   KNLVLKMKTNSL--YLHIPFCEQICAYCDF-CKVFYNEHQADDYLAVLKHELQAL-NITE 60

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  + +I+ GGGTPS +  + +  ++D I K +  S   E++IE NP S++       ++
Sbjct: 61  P--LKTIYIGGGTPSSLNDEQLEWLMD-IIKPYISSETKEVSIEVNPESIDYYKLDILKR 117

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GV+R+S+GV++  +  L+ + R H + +    I  AR I F  +S DL+Y LP QT+T 
Sbjct: 118 GGVSRLSIGVETFNDILLKKINRQHTSIQVERIIDYARKIGFNNISIDLMYGLPNQTITD 177

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            + +L +     ++H+S Y L +E  T+     K+ +     E V   +  L +      
Sbjct: 178 IKNDLAKVRQLPIEHISYYSLILEDHTVL----KNLNYQPLDEEVESKITQLIEESLEQI 233

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
             H YEISN +  G ESLHNL YW+Y +Y GIG GA  ++        I   ++  ++L+
Sbjct: 234 DFHKYEISNFAKTGYESLHNLAYWQYDNYYGIGVGASGKID----DCLIEHNRNLNAYLR 289

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDI---ECERNL 362
             R+N    + K   S E+     LMM LRL +G+ +K++E   G R +D+     +++L
Sbjct: 290 --RQN---TITKMINSKEETMFNHLMMSLRLVKGLDLKEFEKRYGLRAVDVYQTAIDKHL 344

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + +  +  ++   L  T   + +L+ ++ + 
Sbjct: 345 KMKTLV--IENDYLHATSESIKLLNEILIDF 373


>gi|157737443|ref|YP_001490126.1| coproporphyrinogen III oxidase [Arcobacter butzleri RM4018]
 gi|157699297|gb|ABV67457.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri RM4018]
          Length = 357

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 158/269 (58%), Gaps = 17/269 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRSISSIF 75
           +Y+H PFC  KC YC FNS+  ++ + + +++++   +++     +++     + I ++F
Sbjct: 3   LYIHIPFCDSKCFYCAFNSYTDKFSL-KNDYMKALKIQLKNNIEKYVKNRN--KKIETVF 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I+      I + I  N  +   VEIT EANP+S      +  +  GV+R+S 
Sbjct: 60  IGGGTPSTIKAFEYKEIFEII--NPYLEEKVEITTEANPNSASFEWLETMKSLGVSRVSF 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS + + L+FLGR+HN++ AI AI  A  I F  ++ D+IY +   T+   + +L  A
Sbjct: 118 GVQSFQNEKLKFLGRSHNSNSAIKAIQNASEIGFKEINCDIIYGVKNDTLNSIKEDLDIA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            S  + H+S Y LTIE+GT F+K+ K+  + +  E+++ ++++      S +G   YEIS
Sbjct: 178 FSLPITHISAYSLTIEEGTKFFKLDKNS-VKIDDEDLSYEIFDY----FSKNGFTQYEIS 232

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGA 282
           N S    ++S HN  YW++ +Y+G+G GA
Sbjct: 233 NFSRNKNSQSKHNYGYWQHKEYLGVGAGA 261


>gi|157413873|ref|YP_001484739.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9215]
 gi|157388448|gb|ABV51153.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9215]
          Length = 407

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 174/338 (51%), Gaps = 16/338 (4%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSI 74
            Y+H PFC ++C YCDF      + V   +      ++ +L  + + +  +     +S+I
Sbjct: 8   AYIHIPFCHRRCFYCDFAVIPLGNKVDTLQGYGSKTVKEYLNFLYKEILSIKHKSPLSTI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS+++P+ I  ++D   +N+ +    EIT+E +P+S   ++  G+  AG+NR S
Sbjct: 68  YLGGGTPSILDPKQIKELIDIFRENYGIDYGAEITMEVDPASFNQDDLYGFIHAGINRFS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEA-IAAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           LGVQS   Q L   GR H   +A  + + L R     +    S DLI  LP     +W+ 
Sbjct: 128 LGVQSFNNQILEKSGRRHLREDAEKSCLWLKREYDAGLIKSWSLDLIQNLPLSGYKEWQD 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A++++  H+S+Y L IE GT+F K+   G L LPS+  A      T  I    G  
Sbjct: 188 DLKKAITFSPPHISIYDLNIENGTVFKKLVNLGKLKLPSDEEAFRNSESTHLILKNSGYS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMV 308
            YEISN+     +S HN  YW    +   G G+ S    G       + K  + W +K  
Sbjct: 248 RYEISNYCLPQHQSRHNRVYWSGLGWWSFGQGSTSS-PWGEKLTRPRVSKEYKEWVIKQY 306

Query: 309 RKN-GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
             N   +++ + F+  E   DE +M+GLRL+EG+ +K+
Sbjct: 307 EVNLDSSLINRNFVYKE--LDEKIMLGLRLKEGVDIKE 342


>gi|88809167|ref|ZP_01124676.1| hypothetical protein WH7805_05726 [Synechococcus sp. WH 7805]
 gi|88787109|gb|EAR18267.1| hypothetical protein WH7805_05726 [Synechococcus sp. WH 7805]
          Length = 432

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 18/338 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGPRSI 71
            Y+H PFC ++C YCDF       +V  +N         +++  L E++      GP  +
Sbjct: 9   AYLHIPFCHRRCFYCDFAVVPLGDRVNAQNGPGSLTIKAYLELILKEIR--SSPPGP-PL 65

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           ++I+ GGGTPSL+ P  +  +LD +A  + V    EIT+E +P+S  +   +   + GVN
Sbjct: 66  ATIYIGGGTPSLLTPDQVRCLLDALADRFGVQRGAEITLEMDPASFSLEELRALVRHGVN 125

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-----LARNIFPRMSFDLIYALPKQTMTQ 186
           R+SLG QS ++  L  LGR H   + + A H     L        S DLI  LP Q    
Sbjct: 126 RVSLGGQSFDDVVLAGLGRRHRRKDVLEACHWMQRFLQDGRLRSWSLDLIRNLPNQDDEA 185

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L +A+     HLS+Y L++E GT+F +  + G L+LP E+ A D    T    S  
Sbjct: 186 WADVLTQAVELQPPHLSIYDLSVEPGTVFARREQQGVLMLPDEDGAADRIAFTTQYLSDA 245

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN S  G  S HN  YW    +   G GA S    G         +    WL 
Sbjct: 246 GYCRYEISNFSRPGHASRHNRVYWSGAGWWAFGLGATS-APWGERFARPRTREAYAEWLN 304

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
               +G         ++    ++ L++GLR REG+ ++
Sbjct: 305 RQELDGPHSSLLSQSATPLSLEDRLLVGLRCREGVDLQ 342


>gi|281413010|ref|YP_003347089.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           naphthophila RKU-10]
 gi|281374113|gb|ADA67675.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           naphthophila RKU-10]
          Length = 374

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 137/268 (51%), Gaps = 9/268 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF---LTEMQWMRQLTGPRSISSI 74
            L VYVH PFC  KC YCDF      Y V  E F + F   L E+    ++     I + 
Sbjct: 2   KLAVYVHVPFCKSKCVYCDF------YSVVSEKFDEYFSHLLREIDLYEEVLRESEIKTA 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS++ P  + ++L+ + +     + +EITIE NP SVE    + Y++ G+NRIS
Sbjct: 56  YFGGGTPSVVSPSFLGMVLEKLERVSRSFTPIEITIEVNPESVEPEKLKIYKQIGINRIS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+ ++  L+  GR +N         +    F  ++FD I  LP +T    E   +  
Sbjct: 116 LGVQACDDTVLKNTGRLYNEETLKKKAKIILERFENVNFDFILGLPSETDITLEKNFRFL 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   H+SLY L I++ T  + +   G + LP E      ++L        G   YEIS
Sbjct: 176 EEFPPQHVSLYLLEIDEKTKLFDLTTKGLVELPEEGDLERRHDLFVEFLKERGFVRYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           N +    ESLHN+ YWR  +Y+G+G  A
Sbjct: 236 NFAKPEKESLHNIFYWRNENYLGLGVSA 263


>gi|303273222|ref|XP_003055972.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462056|gb|EEH59348.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 484

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 173/372 (46%), Gaps = 48/372 (12%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPR--- 69
            YVH PFC ++C YCDF      ++H     V  G E ++++   E+         R   
Sbjct: 52  AYVHLPFCRRRCYYCDFAVSVVGDAHETSDAVTRGMETYVETLSREIANTPSAPSSRGRR 111

Query: 70  ----SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                + +IFFGGGTPSL+ P  +  +LD +   + + ++ EI++E +P + +    + Y
Sbjct: 112 RHHPPLRTIFFGGGTPSLLPPALLRRVLDALRARFGIDADAEISMEMDPGTFDAAKLRSY 171

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQT 183
            + GVNR+SLGVQS ++  LR  GR H A++A  AI   R        S DLI  LP  +
Sbjct: 172 AELGVNRVSLGVQSFDDAVLRAAGRAHTAADARVAIETVRREARLRAWSLDLISGLPGLS 231

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV--------------LPSE 229
           +  WE  L+ A+   VDH+S+Y L +E+GT F + +                    LP E
Sbjct: 232 LETWEDSLREAVDAGVDHVSVYDLQVEEGTPFGRWYDRDGGGDRDAAAAATAARPPLPRE 291

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKV 288
           +  +D++    SI    G   YEIS+++   A   HN  YW     + G G  A SR + 
Sbjct: 292 SAVIDMFRAASSILRDAGYEHYEISSYARPNARCEHNQTYWNADRGWYGFGLSATSRTRR 351

Query: 289 GSHRVAISIEKHPESWLK-MVRKNGHA--------VVEKEFLSSEQQAD-------EFLM 332
           G+        +  E+++  M+  +  A           ++  + E  A        E LM
Sbjct: 352 GARDARPRKTREYEAFVDAMISIDAAASNDDDDDDDDGRDECAREDDATAVADTLLERLM 411

Query: 333 MGLRLREGISVK 344
           +GLR  +G+  +
Sbjct: 412 LGLRTSDGVDAR 423


>gi|116072312|ref|ZP_01469579.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. BL107]
 gi|116064834|gb|EAU70593.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. BL107]
          Length = 347

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 145/277 (52%), Gaps = 18/277 (6%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL+ P  IA +LD +   + +    EIT+E +P+S + +  +     GVNRI
Sbjct: 1   MYFGGGTPSLLSPDQIADLLDQLRLRYGLQEGAEITLEMDPASFDQHQLKKVLALGVNRI 60

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQTMTQWE 188
           SLG QS ++  L  LGR H A + + A     + +        S DLI +LP QT+  WE
Sbjct: 61  SLGGQSFDDSVLEQLGRRHRAKDLLEACEWMDDAYRSGELSSWSLDLIQSLPGQTLAGWE 120

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L RA++    H+S+Y L++E GT+F+     GDL LP ++V+ DL  LT +  S  GL
Sbjct: 121 HQLDRAIACGSPHISIYDLSVEPGTVFHHRLNQGDLALPDDDVSCDLMALTSARLSTAGL 180

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISNH+  G  S HN  YW    + G G GA S    G         +   +WL   
Sbjct: 181 RRYEISNHARPGHASRHNRVYWSGAGWWGFGMGATS-APWGQRIARPRTREAYAAWLDDH 239

Query: 309 RKN--GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           R++  G  V            DE L++GLR  EG+ +
Sbjct: 240 RESECGLGV----------PLDEQLLVGLRREEGMDL 266


>gi|170079417|ref|YP_001736055.1| coproporphyrinogen III oxidase [Synechococcus sp. PCC 7002]
 gi|169887086|gb|ACB00800.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Synechococcus sp. PCC 7002]
          Length = 396

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 166/331 (50%), Gaps = 14/331 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYK------VGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            Y+H PFC+++C YCDF   V   K         E + +    E++    L G   + ++
Sbjct: 5   AYLHLPFCLRRCFYCDFPITVTGEKQTAGIRTQMEEYGEWLCREIRATPILGG--ELKTV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL     +  +L  + + + ++ + EI++E +P +  +     Y+  G++R+S
Sbjct: 63  FFGGGTPSLFPVDLLEKVLRTLDQRFGIAQSAEISLEIDPGTFSLEQLIRYKNIGISRLS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ ++  L   GR+H       A  HL R+  P  S DLI  LP QT   W+  L +
Sbjct: 123 LGVQAFQDNLLANCGRSHRVINIFTACDHLERSQIP-WSLDLISGLPDQTRDDWQASLDQ 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S Y L IE  T F K ++ G+  LPS+     +Y L   I    G   YEI
Sbjct: 182 AIALNPHHISCYDLVIEPQTPFGKQYEPGEGPLPSDENTAAMYRLASEILRQAGYDHYEI 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISIEKHPESWLKMVRKNG 312
           SN++  G +  HN  YW    Y G G GA S  +     R     E +  +W++   +N 
Sbjct: 242 SNYAKPGYQCRHNRVYWENRPYYGFGMGAASFTQNQRFSRPRTRAEYY--TWVEQYEQN- 298

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           + V++   L+   +  E LM+GLRL EG+ +
Sbjct: 299 NGVLDVAVLTKGDRLLETLMLGLRLTEGLDL 329


>gi|319956390|ref|YP_004167653.1| oxygen-independent coproporphyrinogen iii oxidase [Nitratifractor
           salsuginis DSM 16511]
 gi|319418794|gb|ADV45904.1| oxygen-independent coproporphyrinogen III oxidase [Nitratifractor
           salsuginis DSM 16511]
          Length = 350

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 167/325 (51%), Gaps = 25/325 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
           +Y+H P+C  KC YC FNS+  R+   + +++++   ++  +  R    P SI ++F GG
Sbjct: 3   LYIHIPYCDSKCHYCSFNSYTGRFDT-RPDYMKALHRQLLFELERFEATPGSIETLFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + P+  A + + +     ++S  E+  EANP+S      +G +  G+NRIS GVQ
Sbjct: 62  GTPSTVPPELYAPLFETLKP--YLASEAELNCEANPNSASDTWLKGMKALGINRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H   +AI A+  A +I F R+S DLIY            +L  A   
Sbjct: 120 SFDPDKLKRLGRAHTPRQAIEAVERAADIGFKRLSLDLIYNCAGDDRELLNRDLDIASDL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y+LTIE+GT F +        +  ENVA+  + + ++I    GL  YEISN  
Sbjct: 180 PVGHLSAYELTIEEGTPFAQTPD-----VRQENVALARW-MARAIEE-RGLPQYEISN-- 230

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNL YW+  DYIG+G GA    +   +    +++++      +     H    
Sbjct: 231 -FGDPCRHNLGYWQLKDYIGLGAGAVGFRQDRRYYPPTALDRY------LANPLSH---R 280

Query: 318 KEFLSSEQQADEFLMMGLRLREGIS 342
            E LS+E    E L +GLR R G+ 
Sbjct: 281 TEILSAEDLKTERLFLGLRSRLGVD 305


>gi|153808724|ref|ZP_01961392.1| hypothetical protein BACCAC_03023 [Bacteroides caccae ATCC 43185]
 gi|149128550|gb|EDM19768.1| hypothetical protein BACCAC_03023 [Bacteroides caccae ATCC 43185]
          Length = 335

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 168/327 (51%), Gaps = 10/327 (3%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I +++FGGGTPS +  ++   I   I K++ +    EIT+EANP  +     Q       
Sbjct: 11  IETVYFGGGTPSQLGEEDFQQIFKAIQKHYGLEDCREITLEANPDDLSKEYLQMLSALPF 70

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+G+Q+ ++ +L+ L R HNA  A  A+   R   +  +S DLIY LP +T  +WE 
Sbjct: 71  NRISMGIQTFDDATLKLLKRRHNARTATEAVRRCREAGYQNISIDLIYGLPGETKERWEK 130

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G  
Sbjct: 131 DLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQICEVDEDSSLEFFTLLIEYLQKAGYE 190

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN    G  S HN +YW+   Y+G GP AHS           SI++    ++K + 
Sbjct: 191 HYEISNFCRPGYYSRHNTSYWKGIPYLGCGPSAHSFNGTTREWNISSIDR----YIKGI- 245

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQG 366
           + G  V E E+L    + +EF++  +R   G  ++  + L G  +   C +      + G
Sbjct: 246 EEGQRVFETEYLGPTTRYNEFIITTMRTVWGTPIEKLKQLFGIEMWEYCRKMATPYLKNG 305

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +E  +   LR T+ G+ + DS++++L
Sbjct: 306 KLEEYE-GALRLTREGIFISDSIMSDL 331


>gi|94264366|ref|ZP_01288157.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
 gi|93455195|gb|EAT05411.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
          Length = 404

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 172/346 (49%), Gaps = 23/346 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSF------LTEMQWMRQLT 66
           + + + G+Y+H PFC +KC YC F S   RR  V   +++Q+       L E+ W R+ T
Sbjct: 21  EAATAPGIYLHIPFCHRKCDYCAFVSLPCRRPPV---SYLQALRRQARQLAELPWSRRQT 77

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW----TVSSNVEITIEANPSSVEVNNF 122
                 +IF GGGTP+      +A +L  +   +          EIT+E NP ++ +   
Sbjct: 78  ----FGTIFIGGGTPTSYPAAQLAALLAELRSLFCCRGAAGDEPEITVECNPGTITLEGL 133

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R AGVNR+S+G+QS  +  L  +GR H+ + A+AA+ L R + F   + DL+Y LP 
Sbjct: 134 RQLRAAGVNRLSIGIQSFADHLLTAVGRGHDRAAALAALKLVRQVGFEDYNLDLMYGLPG 193

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q++  ++ +L  AL     HL+LYQLT E GT      + G   LPS+     +    + 
Sbjct: 194 QSIADFKADLLTALEAEPTHLALYQLTPEAGTPLAVRLEAGQQALPSDEACATMEAQARE 253

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +      YE++N+S  G +  HNLNYW  G Y+G+G  A S +      + +     P
Sbjct: 254 LLTEMVYEQYEVANYSLPGYQCRHNLNYWHNGSYLGLGAAAFSSLA----GLRLGNVNGP 309

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             + + +          E L  E    E ++MGLRL  G+ + + +
Sbjct: 310 GHYRRRLAAGRAPYATAEALGREAAFRETVIMGLRLSRGVEIAELQ 355


>gi|160885179|ref|ZP_02066182.1| hypothetical protein BACOVA_03177 [Bacteroides ovatus ATCC 8483]
 gi|156109529|gb|EDO11274.1| hypothetical protein BACOVA_03177 [Bacteroides ovatus ATCC 8483]
          Length = 335

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 10/328 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +I+FGGGTPS +E ++   I D I +++ ++   EIT+EANP  +     +      
Sbjct: 10  DIETIYFGGGTPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLP 69

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE
Sbjct: 70  FNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGLPGETKERWE 129

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G 
Sbjct: 130 NDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGF 189

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS   +       SI    ++++K +
Sbjct: 190 EHYEISNFCRPGKYSHHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGI 245

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQ 365
            + G    E E+L+   + +EF++  +R   G  ++  + + G  +   C++      + 
Sbjct: 246 EE-GCRAFETEYLNPTIRYNEFIITTIRTVWGTPIEKLKQMFGNEMWKYCQKMAAPYLKN 304

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +E      LR T+ G+ + DS++++L
Sbjct: 305 GKLEEYN-GALRLTREGIFISDSIMSDL 331


>gi|169824480|ref|YP_001692091.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 29328]
 gi|167831285|dbj|BAG08201.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 29328]
          Length = 367

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 190/379 (50%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF++  ++Y    E F    L + +          I +I+ GGG
Sbjct: 3   GIYIHIPFCDYKCNYCDFSTMTKQYNRVDEYFR---LLQKEITIYKNPNEKIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++ + I  I + + K++ +    E TIE NP  V     + Y+  GV+RISLGVQS
Sbjct: 60  TPNLVDSKYIKEIYNLLNKSFDLQIK-EFTIECNPEFVTKEKIESYKSIGVDRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++  RFLGR H  ++ + +  + +     +S DLI+  P QT+   + +L      A 
Sbjct: 119 FNDEYNRFLGRGHKVTDVLKSFEIIKQYIDNISIDLIFGFPNQTLESLDNDLNYIRKLAP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK ++D   +  + ++  ++Y   +        + YEISN +  
Sbjct: 179 NHVSWYNMILEPGTKFYKDYED---INRNNDIEYEMY--VKICKGLEDYNHYEISNFAKD 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G  +   +    +        +P    K++ +    +   E
Sbjct: 234 DFESKHNKIYWKDENYYGFGLSSSGYINQKRYTNEFF---YPNYKRKIINEQ-KPINFSE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER---VQFSRL 376
            +  E++  EF++  +RL+EG+ +K++    G +L  +  +N+  +   ER   ++ + L
Sbjct: 290 NIDLEKREFEFIITNMRLKEGLDLKEYNQKFGIDL-YKNNKNMIDKWIKERLLTLENNHL 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + ++   ++ V
Sbjct: 349 SFTDQGFFISNTFFIDILV 367


>gi|94270554|ref|ZP_01291765.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
 gi|93450761|gb|EAT01819.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
          Length = 404

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 172/346 (49%), Gaps = 23/346 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSF------LTEMQWMRQLT 66
           + + + G+Y+H PFC +KC YC F S   RR  V   +++Q+       L E+ W R+ T
Sbjct: 21  EAATAPGIYLHIPFCHRKCDYCAFVSLPCRRPPV---SYLQALRRQARQLAELPWSRRQT 77

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW----TVSSNVEITIEANPSSVEVNNF 122
                 +IF GGGTP+      +A +L  +   +          EIT+E NP ++ +   
Sbjct: 78  ----FGTIFIGGGTPTSYPAAQLAALLAELRSLFCCRGAAGDEPEITVECNPGTITLEGL 133

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R AGVNR+S+G+QS  +  L  +GR H+ + A+AA+ L R + F   + DL+Y LP 
Sbjct: 134 RQLRAAGVNRLSIGIQSFADHLLTAVGRGHDRAAALAALKLVRQVGFEDYNLDLMYGLPG 193

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q++  ++ +L  AL     HL+LYQLT E GT      + G   LPS+     +    + 
Sbjct: 194 QSIADFKADLLTALEAEPTHLALYQLTPEAGTPLAVRLEAGQQTLPSDEACATMEAQARE 253

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +      YE++N+S  G +  HNLNYW  G Y+G+G  A S +      + +     P
Sbjct: 254 LLTEMVYEQYEVANYSLPGYQCRHNLNYWHNGSYLGLGAAAFSSLA----GLRLGNVNGP 309

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             + + +          E L  E    E ++MGLRL  G+ + + +
Sbjct: 310 GHYRRRLAAGRAPYATAEALGREAAFRETVIMGLRLSRGVEIAELQ 355


>gi|15606603|ref|NP_213983.1| oxygen-independent coproporphyrinogen III oxidase [Aquifex aeolicus
           VF5]
 gi|2983815|gb|AAC07371.1| oxygen-independent coproporphyrinogen III oxidase [Aquifex aeolicus
           VF5]
          Length = 370

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 173/329 (52%), Gaps = 14/329 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KCPYCDF S V    V   +++ +   E+   R+L     + +++FGGG
Sbjct: 4   ALYVHVPFCSYKCPYCDFLSLVNS-PVSVRDYLSALKREINLYRELD--VKLETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++P+ +  I++ I K + +S   EIT+E NP +     F+  +K GVNRIS+GVQS
Sbjct: 61  TPTLLKPEELGEIIEEIDKVFGLSGVKEITVECNPETYRKKEFEELKKLGVNRISVGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ LR LGR H   +++  +  L       ++ DLI+  P Q++   E+EL+    + 
Sbjct: 121 FTEKGLRVLGRKHTVKDSLECLESLFEAGIENVNVDLIWGWPTQSLKDLEVELEHLKKFP 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+ + T      K G+     E   V+L+ +        G   YEISN + 
Sbjct: 181 VKHVSAYLLTLYEDTPMGLAFKRGEFKPLEEEEVVELHKMLSEGLRELGFKRYEISNWAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGP---GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            G E  HNL YW+  +++G+G    G +  V+ G+        K+   ++K ++++   V
Sbjct: 241 EGFECRHNLVYWKMEEFLGVGVSAWGFYENVRYGNT-------KNISKYVKFLKEDKKPV 293

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVK 344
             +  L   +   E +M+GLR  EGI  K
Sbjct: 294 EFRVQLDETELEKERIMLGLRTTEGIEEK 322


>gi|317970578|ref|ZP_07971968.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CB0205]
          Length = 374

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 166/316 (52%), Gaps = 21/316 (6%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            GP  +S+I+ GGGTPS++  + +  +L  + + +  +   EI++E +P+S +    QGY
Sbjct: 36  AGP-PLSTIYVGGGTPSMLTAEQLRAVLRSLKRRYGFAPGAEISLELDPASFDHIGLQGY 94

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLAR--NIFPRMSFDLIYALP 180
            KAGVNR+SLG QS ++  L  LGR H      EA A +  AR        S DLI +LP
Sbjct: 95  LKAGVNRVSLGGQSFDDVVLERLGRRHRCRDLLEAAAWLQQARAQGELSSWSLDLIQSLP 154

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
             T   W M+LQ+AL+    HLS+Y L +E GT+F ++   G+L LP E+++ DL  LT 
Sbjct: 155 GATAEHWRMQLQQALALEPPHLSVYDLIVEPGTVFERLESSGELQLPEEDLSADLMELTA 214

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              +A G   YEISN++  G  S HN  YW    + G G GA +    G  +      + 
Sbjct: 215 GTLAAAGFGHYEISNYALPGHASRHNRVYWSGAGWWGFGMGATA-APWGVRQPRPRTREG 273

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
             +WL+  +  G     +   +     DE +M+GLR REG+ +    +LAG    ++   
Sbjct: 274 YAAWLQ--QDPGELGPPQPMPN-----DERVMVGLRRREGVLLTP--LLAG----LDPAG 320

Query: 361 NLQR-QGFIERVQFSR 375
            +QR Q ++ER    R
Sbjct: 321 LMQRWQPYLERGLLRR 336


>gi|323438547|gb|EGA96294.1| coproporphyrinogen III oxidase [Staphylococcus aureus O11]
 gi|323441272|gb|EGA98942.1| coproporphyrinogen III oxidase [Staphylococcus aureus O46]
          Length = 321

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 146/275 (53%), Gaps = 7/275 (2%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRI
Sbjct: 1   MYVGGGTPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRI 58

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L 
Sbjct: 59  SMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLD 118

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YE
Sbjct: 119 LALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYE 178

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K  
Sbjct: 179 ISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKES 234

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            A++     S  ++ +E + +GLRL EG+S + ++
Sbjct: 235 KAILVSNKPSLTERMEEEMFLGLRLNEGVSSRRFK 269


>gi|94268847|ref|ZP_01291301.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
 gi|93451447|gb|EAT02289.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
          Length = 404

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 171/346 (49%), Gaps = 23/346 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSF------LTEMQWMRQLT 66
           + + + G+Y+H PFC +KC YC F S   RR  V   +++Q+       L E+ W R+ T
Sbjct: 21  EAATAPGIYLHIPFCHRKCDYCAFVSLPCRRPPV---SYLQALRRQARQLAELPWSRRQT 77

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW----TVSSNVEITIEANPSSVEVNNF 122
                 +IF GGGTP+      +A +L  +   +          EIT+E NP ++ +   
Sbjct: 78  ----FGTIFIGGGTPTSYPAAQLAALLAELRSLFCCRGAAGDEPEITVECNPGTITLEGL 133

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R AGVNR+S+G+QS  +  L  +GR H+ + A+AA+ L R   F   + DL+Y LP 
Sbjct: 134 RQLRAAGVNRLSIGIQSFADHLLTAVGRGHDRAAALAALKLVRQAGFEDYNLDLMYGLPG 193

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q++  ++ +L  AL     HL+LYQLT E GT      + G   LPS+     +    + 
Sbjct: 194 QSIADFKADLLTALEAEPTHLALYQLTPEAGTPLAARLEAGQQTLPSDEACATMEAQARE 253

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +      YE++N+S  G +  HNLNYW  G Y+G+G  A S +      + +     P
Sbjct: 254 LLTEMVYEQYEVANYSLPGYQCRHNLNYWHNGSYLGLGAAAFSSLA----GLRLGNVNGP 309

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             + + +          E L  E    E ++MGLRL  G+ + + +
Sbjct: 310 GHYRRRLAAGQAPYATAEALGREAAFRETVIMGLRLSRGVEIAELQ 355


>gi|298346288|ref|YP_003718975.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 43063]
 gi|298236349|gb|ADI67481.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 43063]
          Length = 439

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 131/256 (51%), Gaps = 4/256 (1%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+++S+FFGGGTP+++   ++  +L G+++ + +    EIT EANP +V     +     
Sbjct: 63  RALTSVFFGGGTPTVLPATDLVRVLRGLSETFGLVPGAEITTEANPDTVTPQYLEALAAG 122

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G  R+S G+QS     L  L R H     +A +  AR     +S DLIY  P +++  W 
Sbjct: 123 GFTRVSFGMQSAVPAVLATLNRTHQQKHLVAGVRAARAQGLEVSVDLIYGTPGESLADWR 182

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  AL   VDH+S Y L IE GT   +    GD+     +   D Y L     SA GL
Sbjct: 183 PSLDAALELGVDHVSCYALVIEPGTALGRALAQGDIPPVDPDDQADKYELADETLSAAGL 242

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G E  HNL YWR  D+ G GPGAHS   +GS R      +HP  W++ +
Sbjct: 243 QWYEISNWARPGHECRHNLAYWRDQDWYGFGPGAHSH--LGSTR--FWNLRHPAKWMQSL 298

Query: 309 RKNGHAVVEKEFLSSE 324
           +     V  +E ++ +
Sbjct: 299 QAGYRPVDGREIVTGD 314


>gi|269121914|ref|YP_003310091.1| oxygen-independent coproporphyrinogen III oxidase [Sebaldella
           termitidis ATCC 33386]
 gi|268615792|gb|ACZ10160.1| oxygen-independent coproporphyrinogen III oxidase [Sebaldella
           termitidis ATCC 33386]
          Length = 357

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 10/266 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF + +    +G E  I  +   +    +L       +++FGGG
Sbjct: 3   ALYIHIPFCDKKCFYCDFWTFIN---MGHE--IDRYTDYIIKESRLYPVYYYDTVYFGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP LI   N A IL  +     V  N E+T E NP +    +F+ YRKAGVNR+S+G+QS
Sbjct: 58  TPGLIGADNFAKILSALK----VKENAEVTAEINPLNYSTEDFRNYRKAGVNRLSIGIQS 113

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+  GRNHN ++A+     AR   F  ++ DL++ +P QT+     +++     +
Sbjct: 114 FQDHVLKTAGRNHNGTQALETYRKAREAGFENITVDLMFGIPGQTLEDVYNDIKIIKEIS 173

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L  E+GTLF+K  ++G +     ++   +Y       +  G   YEISN + 
Sbjct: 174 PDHISVYSLIWEEGTLFWKQRENGLIEEADIDLEARMYETIIEELTKDGYIHYEISNFAK 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS 284
            G ++ HN  YW   ++IG+G  + S
Sbjct: 234 PGKKARHNTKYWENKEFIGLGVNSSS 259


>gi|303233694|ref|ZP_07320348.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna BVS033A4]
 gi|302495128|gb|EFL54880.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna BVS033A4]
          Length = 367

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 190/379 (50%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF++  ++Y    E F    L + +          I +I+ GGG
Sbjct: 3   GIYIHIPFCDYKCNYCDFSTMTKQYNRVDEYFR---LLQKEITIYKNPNEKIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++ + I  I + + K++ +    E TIE NP  V     + Y+  GV+RISLGVQS
Sbjct: 60  TPNLVDSKYIKEIYNLLNKSFDLQIK-EFTIECNPEFVTKEKIESYKSIGVDRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++  RFLGR H  ++ + +  + +     +S DLI+  P Q++   + +L      A 
Sbjct: 119 FNDEYNRFLGREHKVTDVLKSFEIIKQYIDNISIDLIFGFPNQSLESLDNDLNYITKLAP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK ++D   +  + ++  ++Y   +        + YEISN +  
Sbjct: 179 NHVSWYNMILEPGTKFYKDYED---INRNNDIEYEMY--VKICKGLEDYNHYEISNFAKD 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G  +   +    +        +P    K++ +    +   E
Sbjct: 234 DFESKHNKIYWKDENYYGFGLSSSGYINQKRYTNEFF---YPNYKRKIINEQ-KPINFSE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER---VQFSRL 376
            +  E++  EF++  +RL+EG+ +K++    G +L  +  +N+  +   ER   ++ + L
Sbjct: 290 NIDLEKREFEFIITNMRLKEGLDLKEYNQKFGIDL-YKNNKNMIDKWIKERLLTLESNHL 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + ++   ++ V
Sbjct: 349 SFTDQGFFISNTFFIDILV 367


>gi|163803812|ref|ZP_02197664.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
 gi|159172392|gb|EDP57266.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
          Length = 289

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 133/240 (55%), Gaps = 7/240 (2%)

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-F 168
           +EANP ++E   F GYRKAGV RIS+GVQS E+Q L  LGR H   EA+ A  LA  I  
Sbjct: 1   MEANPGTIEAERFAGYRKAGVTRISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGL 60

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
              + DL++ LP Q++ Q   +L +A+  A  HLS YQLTIE  T+F+         LP 
Sbjct: 61  NSFNLDLMHGLPDQSIEQALTDLDKAIELAPPHLSWYQLTIEPNTMFHYKPP----TLPD 116

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           ++   D++       +A G   YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++  
Sbjct: 117 DDDLWDIFEQGHEKLAAAGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSF 176

Query: 289 GSHRVAISIE-KHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDW 346
              R+  + + KHP  +L   +      ++ E  ++ E +  EF M   RL E    +D+
Sbjct: 177 ADGRIVRTTKVKHPRGYLMAYQNMVKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDY 236


>gi|37522654|ref|NP_926031.1| coproporphyrinogen III oxidase [Gloeobacter violaceus PCC 7421]
 gi|35213655|dbj|BAC91026.1| coproporphyrinogen III oxidase [Gloeobacter violaceus PCC 7421]
          Length = 408

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 138/277 (49%), Gaps = 9/277 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS 72
           G      Y+H PFC  +C YCDF        VG E  I+ ++  +     LT  G + + 
Sbjct: 33  GELPTAAYLHIPFCRTRCRYCDFA-----VTVGTEGLIEKYVRFLLAEIALTPSGGQGLD 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +++FGGGTPSL+  + +  +L  + +++   + + EI++EANP + +     GYR  GVN
Sbjct: 88  TVYFGGGTPSLLSVEQLGRVLAALREHFGGFAPDAEISLEANPGTFDCKKLTGYRSLGVN 147

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQ+ +   L   GR+H   E  +++   R   F   + DLI+ LP Q++  WE  
Sbjct: 148 RLSVGVQAFQSHLLALCGRSHGLEEVYSSVATVRAAGFENFNLDLIFGLPHQSLADWEFS 207

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L     HLSLY L +E+ T F +    G   LP ++  V +Y          G   
Sbjct: 208 LSEVLRLEPTHLSLYDLILEEETPFGREFLGGQAPLPGDDDTVAMYLRACERLQGQGYRQ 267

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
           YEI+N +  G    HN  YW    Y GIG GA   V+
Sbjct: 268 YEIANFARPGFRCRHNRVYWDNRPYYGIGNGATGYVR 304


>gi|15834942|ref|NP_296701.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270285113|ref|ZP_06194507.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270289134|ref|ZP_06195436.1| coproporphyrinogen III oxidase [Chlamydia muridarum Weiss]
 gi|301336508|ref|ZP_07224710.1| coproporphyrinogen III oxidase [Chlamydia muridarum MopnTet14]
 gi|8163196|gb|AAF73546.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Chlamydia muridarum Nigg]
          Length = 376

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 154/277 (55%), Gaps = 21/277 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRS-- 70
           G   L +Y+H PFC KKC YC F  +   YK   E  ++S+   +  + +R+L   R   
Sbjct: 3   GKTPLALYIHVPFCSKKCHYCSF--YTIPYK---EELVRSYCEAVIKEGLRKLAPLRCHY 57

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++FFGGGTPSL+ P  I  IL  +  +    S  E+T+EANP ++     +   +  
Sbjct: 58  YIDTVFFGGGTPSLVPPSLIQDILTTLEAH----SATEVTLEANPENLSQEYIRDLSQTA 113

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+  +  L+ LGR H++S+AI    L     F  +S DLIY LP Q+++ + 
Sbjct: 114 VNRISIGIQTFNDPLLKLLGRTHSSSKAIETFLLCSQYGFSNLSADLIYGLPTQSISDFI 173

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSA 245
            +L +A++  + H+S+Y LT++  T FYK  K    +LPS   E+   ++    + +   
Sbjct: 174 TDLHQAITLPIQHISVYNLTVDPHTSFYKHRKS---ILPSIADEDSLAEMALKAEELLEN 230

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           HG + YE+++++   AES HN  YW    ++G+G  A
Sbjct: 231 HGFNRYELASYAKNHAESKHNTYYWTDKPFLGLGVSA 267


>gi|188585806|ref|YP_001917351.1| oxygen-independent coproporphyrinogen III oxidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350493|gb|ACB84763.1| oxygen-independent coproporphyrinogen III oxidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 401

 Score =  166 bits (419), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 192/387 (49%), Gaps = 20/387 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFG 77
           G+Y+H PFC+ KC YCDFNS   + +    N++++   + +   +  G    S  SI+ G
Sbjct: 10  GLYIHVPFCLSKCKYCDFNSRELQSQDEITNYLKTIKKQTKTFYRKLGLNQESWDSIYIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVS-----SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           GGTPS +  + +  +L    +N   S      + EIT+E NP+S+  +       + VNR
Sbjct: 70  GGTPSCLTEEALHDLLSFYIENSNTSFDNDGQSREITVEVNPNSI-TSEKATILASKVNR 128

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+QS   + L+ LGR H  ++ I A  L        ++ DLIY +P Q +   E +L
Sbjct: 129 ISIGLQSTHSKYLKRLGRIHTWNDFIRAYELLVSKGIDNINVDLIYGIPGQRLEDLEQDL 188

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                   +   H+SLY LTIE+GT   + ++ G+L +  E   V +YN+ + I    G 
Sbjct: 189 DLLTNLTPFPPKHISLYNLTIEEGTPLMEEYQTGELPILDEQSEVSMYNMAREILQDRGY 248

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN S  G +  HNL YW   +Y+G+GPGAHS           SI  + ++     
Sbjct: 249 KHYELSNFSKEGYQCRHNLIYWLRHNYLGLGPGAHSLWNSKRFYCTESITDYLKASQDQD 308

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQ 363
                 + +   +S E+   E + +GLRL  G+ ++  E+     LD+E +     + L 
Sbjct: 309 LDERTLIQDCWDVSREEALSERIFLGLRLLSGVDLE--EISQEFQLDVEKKFAKQIKKLI 366

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            QGF+ +   S ++ T++   + + V 
Sbjct: 367 DQGFLTKTG-SVIKLTEKAYMLSNYVF 392


>gi|302346343|ref|YP_003814641.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica ATCC 25845]
 gi|302150472|gb|ADK96733.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica ATCC 25845]
          Length = 415

 Score =  166 bits (419), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 50/418 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRS--- 70
           LG+Y+H PFC  +C YC F S V   K  +     E ++ +   EM+   +     S   
Sbjct: 2   LGLYIHIPFCASRCIYCGFYSTVPAKKKDERLSVEERYVNAICHEMELRAEKNSDNSGER 61

Query: 71  ---ISSIFFGGGTPSLIEPQNIALILDGIAK------NW-------TVSSNVEITIEANP 114
              +S+I+ GGGTPS +  +++  I   I         W       T ++++EIT+E NP
Sbjct: 62  IGGLSTIYLGGGTPSQLSFESLQKIFQTIDNVYHIGLEWDTENNTCTTATHIEITMECNP 121

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             +     Q  R   +NRIS+G Q+  ++ LRFL R H A E  AA+   R++    +S 
Sbjct: 122 DDITEEFAQNLRSLPINRISMGAQTFSDERLRFLHRRHTADEVEAAVKRLRSVNIKNISV 181

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +W+ +++R L+  ++H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 182 DLMFGFPNETLEEWKEDIERLLALDIEHISAYSLMYEEGTPLYRLLQAGKVKDMDDELYR 241

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAE------------------SLHNLNYWRYGDY 275
            +Y+      +  G   YEISN + L  +                  S HN +YW    Y
Sbjct: 242 QMYDTLIDRLAEAGYEQYEISNFAKLKVQTSNLKVQCSNLKVQSPYRSQHNSSYWHNVPY 301

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
           IGIG  AHS    G     I+  K   +++  + ++     E+E + ++   ++ +M  L
Sbjct: 302 IGIGASAHSYSN-GKRSWNIADTK---AYIAAIEED-RLPCEEEIIDADTHYNDMIMTTL 356

Query: 336 RLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           R  EGI +          L +   + LQ+QG ++      L  T+ G+ + DSV+++L
Sbjct: 357 RTCEGIDLSTLSAEYQTYL-MHLAKPLQQQGLLKE-DNGWLHLTRNGIYVSDSVMSDL 412


>gi|281420803|ref|ZP_06251802.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella copri DSM 18205]
 gi|281405095|gb|EFB35775.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella copri DSM 18205]
          Length = 339

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 171/339 (50%), Gaps = 28/339 (8%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +I +I+ GGGTPS +   ++  I   I KN+T++ N+EIT+E NP  V  +  +  ++  
Sbjct: 15  TIETIYLGGGTPSQLNGSHLNQIFSAIRKNYTLAENMEITMECNPDDVTGDFCETLKQLP 74

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWE 188
           +NRIS+G Q+   + LRFL R HNA E   A+   RNI  R +S DL++  P+++++QW 
Sbjct: 75  INRISMGAQTFCNERLRFLHRRHNAGEVEEAVTRLRNIGIRNISIDLMFGFPEESLSQWM 134

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +++ A+   V+H+S Y L  E+GT  Y M K G +    E  +  +Y       +  G 
Sbjct: 135 SDIRHAIQLDVEHISAYSLMYEEGTPLYHMLKQGKISEIDEETSRKMYETLIDQLTGAGY 194

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW---- 304
             YEISN +  G  S HN +YW    YIGIG  AH            S  +   SW    
Sbjct: 195 EHYEISNFARPGFRSRHNSSYWHEVPYIGIGAAAH------------SYNRKQRSWNIEN 242

Query: 305 -LKMVRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
               +R  G  ++  E E L    + ++ +   LR  +GI++   E   G+ L    +R 
Sbjct: 243 IQTYIRSIGDGILPSESEQLDIFTRYNDLITTALRTSDGINLMKMEQEFGKEL---ADRL 299

Query: 362 LQR-QGFIER----VQFSRLRCTQRGMTMLDSVIANLAV 395
           LQ  Q  I R    ++  RL  T+ G+ + D V+++  +
Sbjct: 300 LQEAQSHISRGLMKIKNGRLSLTREGLYISDDVMSDFMI 338


>gi|326512540|dbj|BAJ99625.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 475

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 25/353 (7%)

Query: 21  VYVHWPFCVKKCPYCDF--------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            YVH PFC K+C YCDF         S       G++  I  ++  +  +R++   R +S
Sbjct: 55  AYVHLPFCRKRCHYCDFPIVALGSSASSPGGSGSGEDPRIADYVRLL--LREVAATRPVS 112

Query: 73  -------SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                  +IFFGGGTPSL+ P+ +A +LD +   + +S+  E++IE +P + +    +  
Sbjct: 113 DDGVPLETIFFGGGTPSLVPPRLVAAVLDALRGRFGLSACPEVSIEMDPGTFDAAKLREL 172

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQT 183
              GVNR+SLGVQ+ +E+ LR  GR H   E   A+ +          S DLI +LP QT
Sbjct: 173 VGVGVNRVSLGVQAFQEELLRACGRAHGLREVHEAVGVVTGCEGLQNWSMDLISSLPNQT 232

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              WE  L+  +     H+S+Y L IE+GT F +++  G   LP+E  + + Y +     
Sbjct: 233 QEMWEESLRCTVDARPTHVSVYDLQIEQGTKFGQIYTPGVFPLPNETDSANFYKIASKRL 292

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           S  G   YEIS++   G E  HN+ YW+   +   G G+ S +    + V  S  +  ++
Sbjct: 293 SEAGYQHYEISSYCKPGYECKHNVTYWQNRPFYAFGLGSASYI----NGVRFSRPRGMKN 348

Query: 304 WLKMVRK--NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +   V+K  +G    E     ++  A + +M+ LR   G+ +  +    G  L
Sbjct: 349 YADWVQKLEDGTWCHESSVSETKDMAMDSVMLSLRTARGLDLHSFSKSFGEGL 401


>gi|320527315|ref|ZP_08028500.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Solobacterium moorei F0204]
 gi|320132339|gb|EFW24884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Solobacterium moorei F0204]
          Length = 366

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 196/378 (51%), Gaps = 32/378 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   C YCDF  HV   +   E ++++  T++Q  R L    ++ +I+ GGGT
Sbjct: 9   LYLHVPFCRTICTYCDF-CHVGYQETVAEQWLEAITTDIQ-NRHLN--ENLVTIYIGGGT 64

Query: 81  PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           P+ +   E   +  +LD  A+        E TIE NP + + +  +  +K GVNR S+G 
Sbjct: 65  PTALSSSELDQLLSLLDPYARMVQ-----EYTIEINPETFDEDKAKILQKHGVNRASIGF 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +E+ L+ + R+H   +    + L R      +S DL+Y+LP QTM   E  LQ A++
Sbjct: 120 QTSDEKLLQMMNRHHRLEDVAETMRLLRKYGIDNISLDLMYSLPTQTMESLEKSLQDAIA 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLSLY LTIE  T+F K   +       +++  D+Y         +G   YEISN 
Sbjct: 180 LEPTHLSLYSLTIEPNTVFAKKGYEH----LEDDIEADMYEWICDFLPKYGFVQYEISNF 235

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN  YW Y D+ GIG GA        + +  +++K+ E           ++ 
Sbjct: 236 AKGNMISIHNCAYWNYQDFYGIGCGASGLEGSTRYDIPKNVKKYIED---------SSIK 286

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQ 372
           +   L+ ++Q  E +MMGLRL+EG++++ +E     ++ +E  R     L  +G +E + 
Sbjct: 287 DTIELTLQEQMFEAVMMGLRLKEGMNIQLFEDRFHTSV-LEVYRAQINKLCHEGKLE-LG 344

Query: 373 FSRLRCTQRGMTMLDSVI 390
            + LRC++ G  +L+S++
Sbjct: 345 GNCLRCSEEGFEILNSIL 362


>gi|224535950|ref|ZP_03676489.1| hypothetical protein BACCELL_00814 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522438|gb|EEF91543.1| hypothetical protein BACCELL_00814 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 337

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 173/328 (52%), Gaps = 10/328 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++ +I+FGGGTPS +  ++   +   I + + +    EIT+EANP  +            
Sbjct: 12  AVETIYFGGGTPSQLSEEDFKEVFKTIEQVYGMREATEITLEANPDDLTEEYIGMLHTLP 71

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NRIS+G+Q+ ++ +L+ L R HNA++AI A+   R   F  +S DLIY LP +T  +W 
Sbjct: 72  FNRISMGIQTFDDATLQLLNRRHNATQAIEAVKRCRQAGFQNISIDLIYGLPGETEQRWA 131

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +LQ+A+S  V+H+S Y L  E+GT  YKM +   +    E+ +++ ++      SA G 
Sbjct: 132 QDLQQAVSLDVEHISAYHLIYEEGTPLYKMLQQHSVSQVDEDSSLNFFSTLIDTLSATGY 191

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G  S HN +YW+   Y+G GP AHS           S+ ++  S  +  
Sbjct: 192 EHYEISNFCKPGMYSRHNTSYWQGIPYLGCGPSAHSFDGDSREWNVASLNQYLSSIEQGQ 251

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
           R++     E E L ++ + +E+++ GLR   GIS ++ +   G  L   C    +     
Sbjct: 252 RQH-----ETEQLDTQTRYNEYIITGLRTMWGISTEELKKKFGDRLWKYCLEQAKPYLGN 306

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +E +   RL+ T+ G+ + D ++++L
Sbjct: 307 GKLE-LHNDRLKLTREGIFISDGIMSDL 333


>gi|62185033|ref|YP_219818.1| coproporphyrinogen III oxidase [Chlamydophila abortus S26/3]
 gi|62148100|emb|CAH63857.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila abortus S26/3]
          Length = 373

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 172/334 (51%), Gaps = 12/334 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G + L +Y+H+PFC KKC YC F + +         +  + L E +Q +  +     + +
Sbjct: 3   GKSPLALYIHFPFCSKKCHYCSFYT-IPYNPESVSLYCNAILQEGLQKLSTIEDTHFVDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSLI P  +  I+  +A +       EIT+EANP  +     +      VNRI
Sbjct: 62  VFLGGGTPSLIPPHYLHNIIQTLAPHAQ-----EITLEANPEDLSEFYLRELLLTAVNRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G Q+  +  L+ LGR H+++ +I A+H    + +  +S DLIY LP Q++  +  +L 
Sbjct: 117 SIGAQTFHDPLLKALGRIHSSAASIDAVHRCYEHGYNNISLDLIYGLPTQSLADFITDLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LT++  T FYK  +     +  +++   +    + + ++ G   YE
Sbjct: 177 QALTLPIAHISLYNLTLDPHTSFYKHRRILAPSIADDDILAAMSLSAEELLTSRGFSRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A+S HNL YW    ++G+G  A   +    H+V          +L+ VRKN 
Sbjct: 237 LASYAKSQAQSKHNLYYWTDQPFLGLGVSASQYI----HKVRSKNLSRISQYLRAVRKNL 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 E L   ++  E L + LRL +G   KD+
Sbjct: 293 PVHESTESLPENERIKEALALRLRLTQGARWKDF 326


>gi|115488116|ref|NP_001066545.1| Os12g0270100 [Oryza sativa Japonica Group]
 gi|108862462|gb|ABA97374.2| oxygen-independent coproporphyrinogen III oxidase family protein,
           expressed [Oryza sativa Japonica Group]
 gi|113649052|dbj|BAF29564.1| Os12g0270100 [Oryza sativa Japonica Group]
 gi|215696979|dbj|BAG90973.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 467

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 177/350 (50%), Gaps = 22/350 (6%)

Query: 23  VHWPFCVKKCPYCDF------NSHVRRYKVGQE-------NFIQSFLTEMQWMRQLTGPR 69
           VH PFC K+C YCDF       S       G +       ++++  L E+   R ++   
Sbjct: 49  VHLPFCRKRCHYCDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDG 108

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPSL+ P+ +A +LD +   + +S++ E++IE +P + +    +     
Sbjct: 109 VPLETVFFGGGTPSLVPPRLVAAVLDALRTRFGLSASPEVSIEMDPGTFDAAKLRELVGL 168

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQ 186
           GVNR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT   
Sbjct: 169 GVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEM 228

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           WE  L+  +     H+S+Y L IE+GT F +++  G   LP+E  + + Y +     S  
Sbjct: 229 WEESLRCTVDARPTHVSVYDLQIEQGTKFGQLYTPGVYPLPNEKDSANFYKIASKRLSEA 288

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G + YEIS++   G E  HN+ YW+   +   G G+ S +    + +  S  +  + + +
Sbjct: 289 GYNHYEISSYCKTGYECKHNVTYWQNRSFYAFGLGSASYI----NGIRFSRPRRMKEYAE 344

Query: 307 MVRKNGHAVVEKEFLSS--EQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            V+K  + V   E  +S  +  A + +M+ LR   G+ V+ +    GR+L
Sbjct: 345 WVQKLENGVWSHESGNSGIKDMAMDVVMLSLRTAWGLDVQSFSKTFGRSL 394


>gi|332664558|ref|YP_004447346.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332333372|gb|AEE50473.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 350

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 173/356 (48%), Gaps = 27/356 (7%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + + + E++  +       +SSI+FGGGTPSL++   +  I   I +   V  + EIT+E
Sbjct: 2   VDAIVRELELQKDYLQGAPLSSIYFGGGTPSLLDAGELERIFAKIYQLHAVEVDAEITLE 61

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
           ANP  +++   Q  R   VNR+S+G+QS  E+ LRF+ R HNA EA A I  A +  F  
Sbjct: 62  ANPDDLDLLKLQALRNTPVNRLSIGIQSFAEEDLRFMNRAHNAQEARACIENALSQGFKN 121

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           ++ DLIY  P  +  QW   L+    Y + HLS Y LT+E  T      K G      E 
Sbjct: 122 LTLDLIYGAPTTSHAQWAKNLETIFQYPIPHLSAYCLTVEPKTALDHFVKKGLAAPVDEE 181

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
            A   +      T A G   YEISN +  G  + HN +YW+   Y+GIGP AHS    GS
Sbjct: 182 HANAQFQHLMEATKARGFEHYEISNFAQPGWYARHNSSYWQGEPYLGIGPSAHSF--NGS 239

Query: 291 HR---VAISIEKHPESWLKMVRKN------GHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
            R   VA + +     +LK++  +         + E+E LS   + +E++M GLR   G 
Sbjct: 240 SRQWNVANNAK-----YLKILNDDTPPTLENSGLFERETLSPATRYNEYVMTGLRTIWGC 294

Query: 342 SVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSRLRCTQRGMTMLDSVIANL 393
           S+   +  A R   +E       Q FI +    VQ  R R +  G  M D + + L
Sbjct: 295 SLDKIDP-AFRTFFLE-----NIQPFITKELVLVQEQRYRLSDTGKFMADHIASEL 344


>gi|89101068|ref|ZP_01173907.1| coproporphyrinogen III oxidase [Bacillus sp. NRRL B-14911]
 gi|89084211|gb|EAR63373.1| coproporphyrinogen III oxidase [Bacillus sp. NRRL B-14911]
          Length = 356

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 154/299 (51%), Gaps = 5/299 (1%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
           + ++Q+   EM+   Q        SIF GGGTP+ ++ + + ++   I K+  +    E 
Sbjct: 9   DEYLQALEKEMELTLQDRPSSPFRSIFVGGGTPTALDARQLEMLCASIRKHMPLEEGAEF 68

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           T EANP  +  +  +    AGVNR+S GVQ+  E+ L+ +GR H A +  A+I LA+   
Sbjct: 69  TFEANPGDLSEDKLKALYDAGVNRLSFGVQTFNEELLKRIGRTHRAKDVFASIELAKKTG 128

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  +S DLIY+LP QT+  ++  L  A +  + H S Y L IE  T+FY + + G L  P
Sbjct: 129 FSSISVDLIYSLPGQTIADFKETLDTAFTLDIQHYSGYSLIIEPKTVFYNLMRKGKLPSP 188

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            E+    +Y L        G   YEISN +  G ES HNL YW   +Y G G GAH    
Sbjct: 189 GEDAEAAMYELLMERMDLEGFKQYEISNFALPGFESRHNLTYWNNEEYYGFGAGAHGYAG 248

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              +     ++K    +++ + +N   V+E   ++  ++ +E + +GLR  EG+ V  +
Sbjct: 249 GSRNANYGPLKK----YMEPLSENKLPVMESHIVTKAERMEEEMFLGLRKTEGVEVSRF 303


>gi|224119576|ref|XP_002318108.1| predicted protein [Populus trichocarpa]
 gi|222858781|gb|EEE96328.1| predicted protein [Populus trichocarpa]
          Length = 439

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 183/378 (48%), Gaps = 23/378 (6%)

Query: 22  YVHWPFCVKKCPYCDFN--SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-------IS 72
           Y+H PFC K+C YCDF   +         +  I +++  +Q  R++   RS       + 
Sbjct: 27  YIHLPFCRKRCHYCDFPIVALGSTNPTDNDPRISNYIELLQ--REIVSTRSDFDTIPPLE 84

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTPSL+ P+ +  ILD +   + V    EI++E +P + +    +     GVNR
Sbjct: 85  TVFFGGGTPSLVSPRMVLSILDTLRVKFGVCEGAEISMEMDPGTFDGRKVKDLMGMGVNR 144

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ+ +E+ L+  GR H   E   AI +  +      S DLI +LP QT   WE  L
Sbjct: 145 VSLGVQAFQEELLKSCGRAHGVKEVYEAIEILGSCGVENWSVDLISSLPLQTPQMWEESL 204

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +  +     H+S+Y L +E+GT F  ++  G+  LP E  + + Y +   + +  G   Y
Sbjct: 205 RLTIEARPKHVSVYDLQVEQGTKFGALYTPGEFPLPCETQSAEFYRMASRMLADVGYRHY 264

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EIS++   G E  HN  YW+   + G G G+ S +    + +  S  +  + ++  V   
Sbjct: 265 EISSYCEDGYECKHNYTYWKNKPFYGFGLGSASYL----NGLRFSRPRKMKEYMGYVENL 320

Query: 312 GHAVVE---KEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECERNLQRQGF 367
            + VV       + ++  A + +M+ LR   G+ ++ + E   G  +   C+     Q +
Sbjct: 321 ENGVVNYCGNNLVDAKDLAVDIVMLSLRTARGLDLRSFAEAFGGSLVHSLCK---VYQPY 377

Query: 368 IERVQFSRLRCTQRGMTM 385
           IE      L   +R MT+
Sbjct: 378 IESGHVVCLDEERRAMTV 395


>gi|302380760|ref|ZP_07269225.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ACS-171-V-Col3]
 gi|302311703|gb|EFK93719.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ACS-171-V-Col3]
          Length = 367

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 190/379 (50%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF++  ++Y    E F    L + +          I +I+ GGG
Sbjct: 3   GIYIHIPFCDYKCNYCDFSTMTKQYNRVDEYFR---LLQKEITIYKNPNEKIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++ + I  I + + K++ +    E TIE NP  V       Y+  GV+RISLGVQS
Sbjct: 60  TPNLVDSKYIKEIYNLLNKSFDLQIK-EFTIECNPEFVTKEKIVSYKSIGVDRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++  RFLGR H  ++ + +  + +     +S DLI+  P QT+   + +L+       
Sbjct: 119 FNDEYNRFLGRGHKVTDVLKSFDIIKQYIDNISIDLIFGFPNQTLESLDNDLKYIRKLTP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK ++D   +  ++++  ++Y   +        + YEISN +  
Sbjct: 179 NHISWYNMILEPGTKFYKDYED---INRNDDIEYEMY--VKICKGLEDYNHYEISNFAKD 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G  +   +    +        +P    K++ +    +   E
Sbjct: 234 DFESKHNKIYWKDENYYGFGLSSSGYINQKRYTNEFF---YPNYKRKIINEQ-KPINFSE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER---VQFSRL 376
            +  E++  EF++  +RL+EG+ +K++    G +L  +  +N+  +   ER   ++ + L
Sbjct: 290 NIDLEKREFEFIITNMRLKEGLDLKEYNRKFGIDL-YKNNKNMIDKWIKERLLTLENNHL 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + ++   ++ V
Sbjct: 349 SFTDQGFFISNTFFIDILV 367


>gi|289450717|ref|YP_003475093.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185264|gb|ADC91689.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 421

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 175/368 (47%), Gaps = 49/368 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLT------------- 66
            Y+H PFC +KC YCDFNS+  + K   E ++ + + E+++  R++              
Sbjct: 11  AYIHIPFCERKCGYCDFNSYAGKEKY-IEPYVDALVNEIRFNFRKMLRAFGSSIPLSELN 69

Query: 67  -GPRSISS-------IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
            G    SS       ++FGGGTPSL+  Q I  I+D +   + ++ N EIT+EANPSS  
Sbjct: 70  FGSEGFSSFDMALRTVYFGGGTPSLLSAQQIGEIIDVLRHTFGLTPNCEITLEANPSSAS 129

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIY 177
             ++   ++ G+NR+S+G+QS  ++ L  LGR H   +       L R     +S DL+ 
Sbjct: 130 ALDWSEVKRFGINRVSVGLQSYNDRLLNVLGRIHTCRDFDCTTAALQRAGLENISCDLMI 189

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF---YKMHKDGD----------L 224
            LP Q++    M L+  +     H+S+Y L IE GT F   Y M                
Sbjct: 190 GLPTQSLADIHMSLEHVIKSGYRHISVYSLIIEPGTPFASLYGMDAPDSKSKLATSVALA 249

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           VLP E       +        HG   YE+SN++  G+ S HN+ YW    Y G G GAH 
Sbjct: 250 VLPDETTERQQQHFVSDYLKDHGFSRYEVSNYAQEGSRSKHNIVYWDGLGYYGFGAGAHR 309

Query: 285 RVKVGSHRVAISIEKHPESWL------KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
              VG  R    I  +P  ++      K+  K  + +  +E +S      EF ++GLR  
Sbjct: 310 F--VGGIRSGSEI--NPLKYISNFSDSKVPTKLDYPI--EEIISRRAAMSEFFVLGLRKT 363

Query: 339 EGISVKDW 346
           +G+S +++
Sbjct: 364 DGVSRQEF 371


>gi|315224306|ref|ZP_07866140.1| coproporphyrinogen dehydrogenase [Capnocytophaga ochracea F0287]
 gi|314945696|gb|EFS97711.1| coproporphyrinogen dehydrogenase [Capnocytophaga ochracea F0287]
          Length = 383

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 191/383 (49%), Gaps = 20/383 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + C YCDF+      + G+   + +   E+   +       + +I+ GGGT
Sbjct: 4   LYIHIPFCRRACYYCDFHFSTTLKRKGE--MVNALCEELILRKGEAVGSELQTIYLGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-----SSVEVNNFQGYRKAGVNRISL 135
           PS++    +  +   I  ++ V++  EIT+EANP     ++      +  R  G+NR+SL
Sbjct: 62  PSILSYDELQQLFRTIFTHYKVNTTAEITLEANPDDFFRATSPEQFLEQLRSLGINRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  E+ LR + R H  S+    + +A   F  ++ DLIY +P+ +  +W+  + +AL
Sbjct: 122 GVQSFFEEDLRLMNRVHTVSQVETLLQIAPQYFNNITIDLIYGIPQMSEERWQENINKAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+ + H+S Y LT+E+ T  +K    G +   S+  A   + +      A G   YE SN
Sbjct: 182 SFDIPHISAYALTVEEKTALHKFIATGKIAPISDEQAYTHFQMLIDTLEAEGFIQYEFSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               G  S +N  YW    Y+GIGP AHS   K  S  +A     H   +++ +++ G  
Sbjct: 242 FGKEGYFSRNNTAYWFGKPYMGIGPSAHSFNGKERSWNIA-----HNIKYIQQIQQ-GIL 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
             EKE L+   + +E ++  +R   GI +++   + G      L  + ++ L  +  +  
Sbjct: 296 PQEKEELTLNNRYNELIITRIRTMVGIDLEEVRTVFGEGYRQYLLQQAQKYLADELLV-- 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
           ++ + L+ T++G  + D + ++L
Sbjct: 354 IEENHLKVTRKGRFLSDGIASDL 376


>gi|257063742|ref|YP_003143414.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791395|gb|ACV22065.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
          Length = 372

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 192/369 (52%), Gaps = 26/369 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +Y+H PFC  +C YCDF +        ++G+  +I++ + +++   +      I +++ 
Sbjct: 8   ALYIHLPFCKHRCAYCDFTTRAIPKDSPEIGE--YIENLVLDIRHASREGFLSQIETVYI 65

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I  ++++ +L  +  +  ++  VE ++EANP SV     +     GVNR+S+G
Sbjct: 66  GGGTPSYIGTKHLSNLLYTLGVSMHLTPEVECSMEANPESVTPELIRDIYALGVNRLSIG 125

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS +++ L+ + R H+ + A  AI +A+  F  +S DL+  +P QT   +   +Q+A+ 
Sbjct: 126 VQSFDDELLKRMDRIHDGARAKEAIAMAQERFDNVSVDLMCGIPGQTPEMFLDSVQQAVD 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAVDLYNLTQSITSAHGLHAYEIS 254
             V H+S+Y LTIE+ T   +M   G++ +P   E+    +  +  ++    G H YE++
Sbjct: 186 LGVKHVSIYPLTIEEHTPLQRMVDAGEIEIPEDHEDREALMMGMAPNVLLPAGFHRYEVA 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +++  G E  HN  YW    Y GIG  A +  +  S R              M +++G+ 
Sbjct: 246 SYALDGYECEHNKKYWTGVPYYGIGVSAVTMTQNDSRR--------------MRKQDGYV 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-ECERNLQRQGFIERVQF 373
           V   + L+  Q   E LMM +R+ +G+SV + +  A     + +  R+LQ+   + +++ 
Sbjct: 292 V---DDLNRRQMMAEDLMMKMRMSQGVSVDEVKAAATLLPKVLQVFRDLQKDNLV-KLED 347

Query: 374 SRLRCTQRG 382
            R + T  G
Sbjct: 348 DRYKPTLGG 356


>gi|323341658|ref|ZP_08081891.1| coproporphyrinogen dehydrogenase [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464083|gb|EFY09276.1| coproporphyrinogen dehydrogenase [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 366

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 188/380 (49%), Gaps = 30/380 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N+  +YVH PFC   C YCDF     R+   ++   Q  +  +Q +  L  P  + +I+ 
Sbjct: 2   NTKALYVHIPFCDHICGYCDFT----RFHYARQISDQFMIRLIQQINVL--PGDLKTIYV 55

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +E   +  +L  +     ++   E T E NP ++   N Q     GVNR+SLG
Sbjct: 56  GGGTPTSLENDQLEALLKALKPK--LADEYEWTFEGNPENLTEENVQMLHNYGVNRMSLG 113

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+  +  L  +GR+H   +    + L R I    +S DL+Y LP Q++  +E  ++  +
Sbjct: 114 VQTTHDDLLEKIGRHHKFYDVEVGVKLLRKIGIENISLDLMYGLPGQSLESFESSMRDVI 173

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   DH+S+Y LT+E  +LF    + G   +P E +  +++     +    G   YEISN
Sbjct: 174 ALKPDHVSIYALTVEPNSLF---GRRGIQPVPIE-LETEMFLSCIQLMEGAGYEQYEISN 229

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG--H 313
            +  G+ S HN  YWRY D+  +GPG  S +K    R      K   + L M  K    H
Sbjct: 230 FALPGSRSQHNQVYWRYEDFYALGPG--SSLKHNHQR------KTWTTKLGMYLKEDAYH 281

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            V++   L+ E +  EF+MMGLRL++G++   ++   G  L+ +   +   +G   ++ +
Sbjct: 282 EVID---LTLEDEMFEFMMMGLRLKDGVAYSRFQERFGVALE-DVFSDAIAEGISRKLLY 337

Query: 374 SR---LRCTQRGMTMLDSVI 390
                L+ T  G  MLD  +
Sbjct: 338 KSDDVLKTTFEGFVMLDDTL 357


>gi|257463044|ref|ZP_05627446.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|317060648|ref|ZP_07925133.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313686324|gb|EFS23159.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 360

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 143/264 (54%), Gaps = 10/264 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC++KC YCDF S       G+  + + +L  ++    L       +I+FGGG
Sbjct: 11  AVYIHIPFCLQKCEYCDFTSFS-----GKSEWKKRYLEALRTEILLYEHSYYDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + I+ IL  +  +       EIT+E NP ++       Y +AGVNR+S+G+QS
Sbjct: 66  TPSLLEGEEISEILKLLPHD----ERSEITLECNPKTLNSKKLWEYYQAGVNRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++E+ L  LGR H A EA      AR + F  +S D++++LP QT+ + + +++  LS  
Sbjct: 122 MKEKYLNLLGRLHTAEEAKEVFWKARELGFQNISVDMMFSLPTQTLKEVKEDVEEFLSLG 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L  E+ T F+   + G       ++  ++Y          G   YEISN + 
Sbjct: 182 AEHISIYSLIWEENTPFFTKLEKGIYHRTENDLEAEMYQSIIERMKQKGYEHYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGA 282
            G  S HN  YW+   Y+G+G GA
Sbjct: 242 KGYISRHNQKYWKNQKYLGLGLGA 265


>gi|86141894|ref|ZP_01060418.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leeuwenhoekiella blandensis MED217]
 gi|85831457|gb|EAQ49913.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leeuwenhoekiella blandensis MED217]
          Length = 337

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 179/337 (53%), Gaps = 13/337 (3%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +R+   P  + +I+FGGGTPSL++ +++  I   I  ++ V+   EIT+EANP  +    
Sbjct: 3   LRKDEIPGPLQTIYFGGGTPSLLDAEDLQQIFKTIDSHFEVTEAPEITLEANPDDLTEAK 62

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
            +   ++ +NR+S+GVQS  E+ L+ + R H+A EA+A + LA+  F  +S DLIY +P 
Sbjct: 63  LKMLAESRINRLSIGVQSFFEEDLKLMNRAHDAGEALACLLLAKQYFDNISIDLIYGMPD 122

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
            +  +W+  L +A++  + H+S Y LT+E  T   K  + G +    + VA   + +  +
Sbjct: 123 MSDARWQENLDQAIALDIPHISSYALTVEPNTALQKFIEKGVVKPMDDAVAQKHFEILLA 182

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
                G   YE SN    G  S +N  YW    Y+GIGP AHS      +  + +I  +P
Sbjct: 183 HMEKAGFENYEFSNFGKPGYFSQNNTAYWTGKPYLGIGPSAHS---FDGNTRSWNINNNP 239

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           + ++K +  N    +E+E LS+  + +E++M GLR   GIS++  E   G       E  
Sbjct: 240 K-YIKAIEANV-LPIERENLSTTDKYNEYVMTGLRTIWGISLEKIEQDFGLKFK---EYA 294

Query: 362 LQR-QGFIER----VQFSRLRCTQRGMTMLDSVIANL 393
           LQ+ Q  IE     +   R+  T++G  + D + ++L
Sbjct: 295 LQQAQKHIEEHLLFLDDHRIVVTKKGKFLSDGLASDL 331


>gi|255540379|ref|XP_002511254.1| coproporphyrinigen III oxidase, putative [Ricinus communis]
 gi|223550369|gb|EEF51856.1| coproporphyrinigen III oxidase, putative [Ricinus communis]
          Length = 478

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 168/345 (48%), Gaps = 15/345 (4%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISS 73
            Y+H PFC K+C YCDF      +S+         N+ +    E+   +  +   S + +
Sbjct: 65  AYIHLPFCRKRCHYCDFPIVALGSSNPTETDPRISNYAELLQQEILSTKPNSDSYSPLQT 124

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P+ ++ ILD +   + +  N EI++E +P + +    +     GVNRI
Sbjct: 125 VFFGGGTPSLVSPRIVSSILDTLKLKFGLCKNAEISMEMDPGTFDDKKMEELMGLGVNRI 184

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +++ L+  GR H   E   AI + R+      S DLI +LP QT   WE  L 
Sbjct: 185 SLGVQAFQDELLKACGRAHGIEEVYQAIEIIRSCGIGNWSLDLISSLPHQTPQMWEQSLS 244

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +     H+S+Y L +E+ T F  ++  G+  LPSE  + D Y +   + S  G   YE
Sbjct: 245 LTVQAQPKHVSVYDLQVEQETKFGILYTPGEFPLPSEIQSADYYRMASRMLSDAGYSHYE 304

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS++   G E  HN  YW+   + G G G+ S V    + V  S  +    ++  V+   
Sbjct: 305 ISSYCKDGFECKHNFIYWKNKPFYGFGLGSASYV----NGVRFSRPRKMREYMNYVQNLE 360

Query: 313 HAVVEKEFLSSEQQAD---EFLMMGLRLREGISVKDWEMLAGRNL 354
           +  V+     +    D   + +M+  R   G+ ++ +    G +L
Sbjct: 361 NGTVDCSGNGNRDAKDLALDVVMLSFRTARGLDLRSFADAFGSSL 405


>gi|317132587|ref|YP_004091901.1| oxygen-independent coproporphyrinogen III oxidase [Ethanoligenens
           harbinense YUAN-3]
 gi|315470566|gb|ADU27170.1| oxygen-independent coproporphyrinogen III oxidase [Ethanoligenens
           harbinense YUAN-3]
          Length = 368

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 182/384 (47%), Gaps = 26/384 (6%)

Query: 16  SNSLGVYVHWPFCVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S SLG+YVH PFC   KCPYCDF S     +V  +           ++ +L G R + S+
Sbjct: 2   SASLGLYVHVPFCAPAKCPYCDFYSVPFAPEVATQYADVLRAAARTYVPRLAG-RRVESV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP ++    +A +L    + + V+ + EIT+EANP S         R AG NR+S
Sbjct: 61  YFGGGTP-VLLGGTLAALLTYFKQIYPVAPDAEITVEANPGSDLAELLPVLRAAGFNRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS  +  L  LGR H  ++   A+  AR   F  +S DL+ A P QT       +  
Sbjct: 120 LGMQSACDAELAALGRRHKTADVARAVEAARKAGFANLSLDLMLATPGQTPESIRRSVAF 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           A +  V+H+S Y L +E GT F  +  ++ D      ++  D Y        A G   YE
Sbjct: 180 AAAQGVEHVSAYLLKVEPGTAFAMRGQQEAD-----TDLQADCYLAACDALEARGYAQYE 234

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G  S HNL YW  G+Y+G+GPGAH  +       A  +     ++L       
Sbjct: 235 ISNFARPGFASRHNLRYWDCGEYLGLGPGAHGFLDGRRFHYARDL----AAFLTG----- 285

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
                 E        +E++M+ LRL +G+         G N    D +    L+  GF+ 
Sbjct: 286 ---RPPEGDGPGGGFEEYVMLRLRLADGVEKNALRARCGANFSAFDAKTVERLENGGFLR 342

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           R    R+  T++G  + ++VI  L
Sbjct: 343 RGA-GRIALTRQGFLVSNAVIGAL 365


>gi|269303256|gb|ACZ33356.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila pneumoniae LPCoLN]
          Length = 373

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 172/319 (53%), Gaps = 16/319 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---I 71
           G + L +Y+H PFC KKC YC F  +   YK    +   + + + + +R+L   +    +
Sbjct: 3   GKSPLALYIHIPFCTKKCRYCSF--YTIPYKSESVSLYCNAVIQ-EGLRKLAPIQETHFV 59

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+   ++  IL  +A +       EIT+EANP ++  +  +  ++  +N
Sbjct: 60  ETVFFGGGTPSLVSHLDLKRILKELAPHAQ-----EITLEANPENLTASYLRQLQETPIN 114

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQ+ ++  L+ LGR H++S AI A+    N  F  +S DLIY LP Q++  +  +
Sbjct: 115 RISVGVQTFDDSILQLLGRTHSSSVAITALQECHNHGFSNLSIDLIYGLPTQSLEIFLSD 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + G   
Sbjct: 175 LHQALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQGFQR 234

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+++++  G  + HNL YW    ++G+G  A S+   G      S   H   +L+ VRK
Sbjct: 235 YELASYAKPGYPAKHNLYYWTDRPFLGLGVSA-SQYLHGERSKNYSRISH---YLRAVRK 290

Query: 311 NGHAVVEKEFLSSEQQADE 329
           N       E L  +++  E
Sbjct: 291 NLPTQETSEILPEKERIKE 309


>gi|159491038|ref|XP_001703480.1| hypothetical protein CHLREDRAFT_99520 [Chlamydomonas reinhardtii]
 gi|158280404|gb|EDP06162.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 401

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 141/272 (51%), Gaps = 12/272 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE-------NFIQSFLTEMQWMRQLTGPRSISS 73
            Y+H PFC +KC YCDF        VG++         + +  T     +     +    
Sbjct: 2   AYIHLPFCKRKCFYCDFPVEA----VGRDPTAPTKGERVDTVCTRCASKQSAPYRKRCRW 57

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +     TPSL+ P+ +A IL+ +   + +++  E+++EA+P + ++   + YR+ GV+R+
Sbjct: 58  VCERRHTPSLLPPELLARILEALDARFGIAAGAEVSLEADPGTFDLARLREYRRLGVSRL 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ +++ L   GR H+  EA AAI   R       S DLI  LP  T   W   LQ
Sbjct: 118 SVGVQAFQQELLTACGRGHDLLEAEAAIEAVRAAGLASWSLDLISGLPGLTPDMWAASLQ 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RA++   DH+S+Y L +E+GT F +  + G L LP++  AV++Y     + +A G   YE
Sbjct: 178 RAVAAGPDHVSVYDLQVEEGTPFERWQRAGRLRLPADEAAVEMYGKASQVLTAAGFEHYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           +SN++  G    HN  YW    Y   G GA S
Sbjct: 238 VSNYAKPGHRCAHNQVYWSGLPYYAFGLGAAS 269


>gi|218282266|ref|ZP_03488565.1| hypothetical protein EUBIFOR_01147 [Eubacterium biforme DSM 3989]
 gi|218216734|gb|EEC90272.1| hypothetical protein EUBIFOR_01147 [Eubacterium biforme DSM 3989]
          Length = 359

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 165/329 (50%), Gaps = 26/329 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC   C YCDF   VR  K   E+F  S+  ++    Q     S+ +++FGGGTP
Sbjct: 6   YVHIPFCDSICAYCDF---VRIQK--NESFFSSWKEKLIQEIQEYKISSLHTLYFGGGTP 60

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SL+   +   I +   K+       E T+E NP S++ +    Y   GVNRISLGVQS +
Sbjct: 61  SLLSVDDFVSIRNCFPKDIE-----EFTVECNPESLDEDKLNAYVALGVNRISLGVQSFK 115

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L+   R H AS+AI+ I ++ ++     S DLI+ LP QTM   + ++   LS  + 
Sbjct: 116 DDLLKVCRRTHTASQAISVIENIKKSSVSTFSIDLIFGLPNQTMEDVKKDIFTFLSLDIP 175

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           HLS+Y L IE+ ++F K       V P + ++  D++        A G   YEIS+    
Sbjct: 176 HLSIYSLQIEENSIFGKTG-----VEPCDSDLEADMFEYITKTLEAAGYIHYEISSFCKP 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HNL YW+  D+ G G GA  R+          I     + LK     G   V  +
Sbjct: 231 GHYSKHNLAYWQDKDFYGFGCGASGRLD--------GIRYDNTTSLKEYCSLGPCPVYID 282

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +E+  D  +MM LR + G+++K+W +
Sbjct: 283 ETLAERGMDA-IMMALRTKFGLNIKEWNL 310


>gi|229828441|ref|ZP_04454510.1| hypothetical protein GCWU000342_00502 [Shuttleworthia satelles DSM
           14600]
 gi|229793035|gb|EEP29149.1| hypothetical protein GCWU000342_00502 [Shuttleworthia satelles DSM
           14600]
          Length = 416

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 145/267 (54%), Gaps = 13/267 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           +KKC YCDFNSH    K  Q  +  + + E+ W  +L G + ++S+F GGGTPS ++   
Sbjct: 1   MKKCLYCDFNSHPGSPKE-QAAYAGALVKEIDWWGRLIGRKQVASVFVGGGTPSWLDYSL 59

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  I   + +N++++ N E+++E NP +V     + Y++ G+NR+S+G+QS  +  L  L
Sbjct: 60  MEQIFAAVYRNFSLARNAEVSLELNPGTVTAKALRAYQRMGINRVSIGLQSSNDDELALL 119

Query: 149 GRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR H+ ++ +    H+    F  ++ D++  LP QT  + +  LQ       +H+S Y L
Sbjct: 120 GRIHSWNDFLRTFEHVRAAGFSNVNVDIMTGLPLQTEDKLKRTLQMVTMLRPEHISAYSL 179

Query: 208 TIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +E GT FY+ +  GD+           LP  ++   LY++ ++  +  G   YEISN++
Sbjct: 180 IVEPGTPFYERYA-GDIARRERGEKTLELPDSDLEYALYDMARAFLTGKGYRQYEISNYA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS 284
             G    HNL YW    Y+G G GA S
Sbjct: 239 REGYACRHNLGYWERKPYLGFGVGAAS 265


>gi|317011425|gb|ADU85172.1| coproporphyrinogen III oxidase [Helicobacter pylori SouthAfrica7]
          Length = 345

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 20/323 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++++ +E +IQ+   +++   + T  + I S+F GGGT
Sbjct: 3   LYIHIPFCESKCGYCAFNSYENKHEL-KEAYIQALCLDLKHALKQTHEK-IESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +  N  QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKSFEKIFESIHQNARLSVDCEITTEANPELISKNWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P  +    + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGMENISIDLIYNTPLDSEKSLKEELRLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K  K      PS    VD  N+ +    +     YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEKNAKK-----PS---CVDFDNVVKETLESFSFKQYEVSNYA-RN 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V+         IE + +  L+          + E 
Sbjct: 232 YQVKHNLAYWEAKDYLGCGAGAVGCVENERFYAKKLIESYIKDPLQR---------QVEP 282

Query: 321 LSSEQQADEFLMMGLRLREGISV 343
           LS + +  E L +GLR   G+ +
Sbjct: 283 LSEKDKRLEKLFLGLRCILGVEL 305


>gi|269941073|emb|CBI49457.1| putative oxygen-independent coproporphyrinogenIII oxidase
           [Staphylococcus aureus subsp. aureus TW20]
 gi|329314259|gb|AEB88672.1| Coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 321

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 142/270 (52%), Gaps = 7/270 (2%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RI
Sbjct: 1   MYVGGGTPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRI 58

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L 
Sbjct: 59  SMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLD 118

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YE
Sbjct: 119 LALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYE 178

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G ES HN  YW   +Y G G GA   V  G     I+   H   ++K + K  
Sbjct: 179 ISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVD-GVRYTNINPVNH---YIKAINKES 234

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            A++     S  ++ +E + +GLRL EG+S
Sbjct: 235 KAILVSNKPSLTERMEEEMFLGLRLNEGVS 264


>gi|166154273|ref|YP_001654391.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 434/Bu]
 gi|166155148|ref|YP_001653403.1| coproporphyrinogen III oxidase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335523|ref|ZP_07223767.1| coproporphyrinogen III oxidase [Chlamydia trachomatis L2tet1]
 gi|165930261|emb|CAP03747.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis 434/Bu]
 gi|165931136|emb|CAP06701.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 376

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 176/332 (53%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L+
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLR 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++   ++    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAEMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|255506625|ref|ZP_05382264.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D(s)2923]
 gi|289525097|emb|CBJ14568.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis Sweden2]
 gi|296434638|gb|ADH16816.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/150]
          Length = 376

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVSP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++   ++    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAEMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|320107410|ref|YP_004183000.1| oxygen-independent coproporphyrinogen III oxidase [Terriglobus
           saanensis SP1PR4]
 gi|319925931|gb|ADV83006.1| oxygen-independent coproporphyrinogen III oxidase [Terriglobus
           saanensis SP1PR4]
          Length = 383

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 180/389 (46%), Gaps = 25/389 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRS 70
           +SLGVY+  PFC  KC +C+F S     +   + ++     E++  RQ+        P++
Sbjct: 3   DSLGVYLSVPFCKAKCSFCNFASDAFAPER-MDGYVARLCAEIRSARQIAAERGVVVPQT 61

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S++FGGGTPSL+       I   +   + V +N EIT+E  P  +   + Q   + GV
Sbjct: 62  VDSVYFGGGTPSLLGVDKFEEIFAALRGEFDVVTNAEITMECAPGQIAETSLQAAMRLGV 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +R+SLGVQS  ++    +GR H   +    I   R++   + FDLI  LP QT   W   
Sbjct: 122 SRVSLGVQSFVDRESAAVGRLHTGIQCENEIARLRSLGLDVGFDLICGLPHQTCESWRES 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGT-----LFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L+RA++    H+S+Y L +++ +     L     + G  ++P +    ++Y     + + 
Sbjct: 182 LRRAVATGAHHVSVYMLEVDEDSRLGRELIGPGVRYGAGMVPDDGAVAEMYLEACDVLAE 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESW 304
            GL  YEISN +    +S HN  YW    Y+G G  AHS +     R A  S     +++
Sbjct: 242 GGLAQYEISNFAREDHQSRHNRKYWERAPYLGFGLDAHSMLPDEQGRAARFSNGDELDAY 301

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           L          V  E +   +  +E + +GLRL EG+      +LA    D+    +   
Sbjct: 302 LSEADP-----VSVERVEDAEAFEEKVFLGLRLNEGVEAA---LLA----DVHGAVDEMV 349

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           QG +      R   T RG  +  SV   L
Sbjct: 350 QGGLMWSANGRFGLTARGRVVSSSVFGEL 378


>gi|91218363|ref|ZP_01255307.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
 gi|91183501|gb|EAS69900.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
          Length = 335

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 156/284 (54%), Gaps = 7/284 (2%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           MR+   P ++ +I+FGGGTPSL+  +++ LI + I  ++ V    EIT+EANP  +++  
Sbjct: 1   MRKTELPAAVENIYFGGGTPSLLSQEDLDLIFETIYGHYEVVDQPEITLEANPDDLDLEY 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
            +      VNR+S+GVQS  E  L+ + R H A EA ++I LA+  F  +S DLIY +P 
Sbjct: 61  LKMLYNTKVNRLSIGVQSFFEVDLKLMNRAHTAEEAESSILLAKRFFDNISIDLIYGIPD 120

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQ 240
             + +W+  L + +   V H+S Y LT+E  T   K   D +++ P ++    L +++  
Sbjct: 121 MDVERWKANLAKTIELEVSHISSYALTVEPNTPL-KTFIDKEIIPPVDDDLAKLHFDILV 179

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               A+G   YE SN    G  S +N  YW    Y+GIGP AHS V       + +I  +
Sbjct: 180 ETMMANGFENYEFSNFGKPGYFSQNNTAYWTGKFYLGIGPSAHSFVHTTR---SWNISNN 236

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           P+ ++K +  +     E+E LS+  + +E++M  LR + G+ +K
Sbjct: 237 PK-YIKAIEAD-ELPYEQEVLSTTDRYNEYVMTRLRTKWGVDMK 278


>gi|329960204|ref|ZP_08298646.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fluxus YIT 12057]
 gi|328532877|gb|EGF59654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fluxus YIT 12057]
          Length = 342

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 177/342 (51%), Gaps = 14/342 (4%)

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E++  +       + +I+FGGGTPS +  ++ + I   I   + +    EIT+EANP  +
Sbjct: 4   ELKNRKDYLKDEPVKTIYFGGGTPSQLSGEDFSSIFRTIEDTYGLEHAEEITLEANPDDL 63

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                   +    NRIS+G+Q+ ++ +L+ L R HN+++AI A+   R   F  +S DLI
Sbjct: 64  TEEYAAMLQALPFNRISMGIQTFDDATLKLLNRRHNSAQAITAVERCRQAGFRNISIDLI 123

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP +T  +W  +LQ+A+S  V+H+S Y LT EKGT  Y+M +   +    E+ +V  +
Sbjct: 124 YGLPGETDKRWAHDLQQAVSLNVEHISAYHLTYEKGTRIYEMLQAHRIREVDEDSSVRFF 183

Query: 237 N-LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
           + LT ++ +A G   YEISN    G  S HN +YW+   Y+G GP AHS           
Sbjct: 184 STLTDTLGNA-GYEHYEISNFCKPGMHSRHNTSYWKGIPYLGCGPSAHSFNTEAREWNLS 242

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           S++ + +S  K     GH   E E L    + +E +M  LR   G+S++  E   G    
Sbjct: 243 SLDTYIDSIEK-----GHRSYETEVLDKVTRYNECVMTSLRTSRGVSLEYIEQAFGTEFR 297

Query: 356 IECERNLQ----RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             C RN+     + G +  +    L  T+ G+ + D+++++L
Sbjct: 298 QYC-RNMAAPHLKSGKL-NIHNDYLSLTRDGIFISDNILSDL 337


>gi|15604771|ref|NP_219555.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|3328444|gb|AAC67643.1| Coproporphyrinogen III Oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748182|gb|ADI50728.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-EC]
 gi|297749062|gb|ADI51740.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-LC]
          Length = 378

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++   ++    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAEMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|296438356|gb|ADH20509.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/11023]
          Length = 376

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++   ++    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAEMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|255310854|ref|ZP_05353424.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276]
 gi|255317154|ref|ZP_05358400.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276s]
 gi|296435569|gb|ADH17743.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9768]
 gi|296436493|gb|ADH18663.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11222]
 gi|296437429|gb|ADH19590.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11074]
 gi|297139928|gb|ADH96686.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9301]
          Length = 378

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++   ++    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAEMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|227874750|ref|ZP_03992903.1| possible coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC
           35243]
 gi|227844525|gb|EEJ54681.1| possible coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC
           35243]
          Length = 459

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 1/228 (0%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++ G R+I ++FFGGGTP+++ P+++  I   +   + V    E+T EANP +V+    +
Sbjct: 54  EIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYALKDAFGVCPGAEVTTEANPDTVDAGYLE 113

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
                G  R+S G+QS     LR L R H  +   AA+  A+++    S DLIY  P ++
Sbjct: 114 ELAAGGFTRVSFGMQSAVSGVLRVLDRTHTQANLEAAVRAAQSLGLECSVDLIYGTPGES 173

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L+ AL++ V H+S Y L+IE  T   +  + G +     +   + Y +   + 
Sbjct: 174 VADWRESLEAALAFGVSHVSCYALSIEPATALGRELRQGKITPVDPDDQAEKYEIADDLL 233

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
           SA GL  YEISN +  G E  HNL YWR  DY G GPGAHS ++ G H
Sbjct: 234 SAAGLQWYEISNWARPGHECRHNLAYWRNRDYYGFGPGAHSHLR-GEH 280


>gi|288802794|ref|ZP_06408231.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica D18]
 gi|288334611|gb|EFC73049.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica D18]
          Length = 422

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 199/425 (46%), Gaps = 57/425 (13%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRS--- 70
           LG+Y+H PFC  +C YC F S V   K  +     E ++ +   EM+   +     S   
Sbjct: 2   LGLYIHIPFCASRCIYCGFYSTVPTKKKDERLSIEERYVNAICHEMELRAEKNSDSSGER 61

Query: 71  ---ISSIFFGGGTPSLIEPQNIALILDGIAK------NWTVSSN-------VEITIEANP 114
              +S+I+ GGGTPS +  +++  I   + K       W +++N       +E+T+E NP
Sbjct: 62  IGGLSTIYLGGGTPSQLSFESLQKIFQTVDKVYHIGLEWDIANNTCTTATPIEVTMECNP 121

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             V     Q  R   +NRIS+G Q+  ++ LRFL R H A E   A+   R++    +S 
Sbjct: 122 DDVTEEFAQNLRSLPINRISMGAQTFSDERLRFLHRRHTADEVETAVKRLRSVNIKNISV 181

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +W+ +++R L+  ++H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 182 DLMFGFPNETLEEWKEDIERLLALDIEHISAYSLMYEEGTPLYRLLQAGKVKDMDDELYR 241

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAE-------------------------SLHNLN 268
            +Y+      +  G   YEISN + L  +                         S HN +
Sbjct: 242 QMYDTLIDRLAEAGYEQYEISNFAKLKLQSSNFKVQTSKFNVQCSNFKVQSPYRSQHNSS 301

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD 328
           YW    YIGIG  AHS    G     I+  K   +++  + ++     E+E + ++   +
Sbjct: 302 YWHNVPYIGIGASAHSYSN-GKRSWNIADTK---AYIAAIEED-RLPCEEEIIDADTHYN 356

Query: 329 EFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           + +M  LR  EGI +          L +   + LQ+QG ++      L  T+ G+ + DS
Sbjct: 357 DMIMTALRTCEGIDLSTLSAEYHTYL-MRLAKPLQQQGLLKEDN-GWLHLTRDGIYVSDS 414

Query: 389 VIANL 393
           V+++L
Sbjct: 415 VMSDL 419


>gi|27904972|ref|NP_778098.1| putative oxidase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38372571|sp|Q89A47|Y498_BUCBP RecName: Full=Uncharacterized protein bbp_498
 gi|27904370|gb|AAO27203.1| putative oxidase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 374

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 199/380 (52%), Gaps = 22/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y++ P+  K+  Y DF     + K+ ++ +I   L +++    L   R+I++IF GG
Sbjct: 4   LGLYINIPWPTKRYKYHDFKFPEYKKKINEKKYIHHLLQDLKKDSLLVPNRTINTIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
             P+  +  +I  +L  I     +S N E TIE + S +       Y+K G+NR S+ +Q
Sbjct: 64  IAPNFFKLTSIKYLLKKIKNIIPISKNAENTIEFHISKLSEKKIFYYKKFGINRFSIRIQ 123

Query: 139 SLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           + +++    L + H   N    I  I++ +  F  ++ DLIY LPKQ++ +  ++L+ A+
Sbjct: 124 TFDQKKFNSLSKVHISKNILHKIKKINIEK--FKNINLDLIYGLPKQSLQEALLDLKTAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S   +H+S  +  IEK    YK + K  +L     N+   ++   + +    G   YEIS
Sbjct: 182 SLKPNHISWCEFYIEKNNNNYKNLSKSCNL-----NIIWKIFLQGEKLLKKSGYKKYEIS 236

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGH 313
           ++S    + LHNLNYW++GDY+GIG  AH ++   + ++  +I+ K+ + ++     NG 
Sbjct: 237 SYSKTNYQCLHNLNYWKFGDYLGIGCNAHGKITQKNGKIIKTIKNKNLKKFM-----NGK 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE---MLAGRNLDIECERNLQRQGFIER 370
              +   +S +  + EF M  LRL   I  KD++    ++   +  E ++ +++   IE 
Sbjct: 292 YTYKNHIISKKNLSLEFFMNRLRLNTPIYRKDFKKYTYISEFYIKNEIKQAIEQNYLIET 351

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            ++ ++  T +G+  LDS++
Sbjct: 352 KKYWKM--TSKGIQFLDSLL 369


>gi|76788765|ref|YP_327851.1| coproporphyrinogen III oxidase [Chlamydia trachomatis A/HAR-13]
 gi|237802487|ref|YP_002887681.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804402|ref|YP_002888556.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76167295|gb|AAX50303.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis A/HAR-13]
 gi|231272702|emb|CAX09605.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231273721|emb|CAX10499.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis B/Jali20/OT]
          Length = 378

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 175/332 (52%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALVLTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++   ++    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAEMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|109948127|ref|YP_665355.1| coproporphyrinogen III oxidase [Helicobacter acinonychis str.
           Sheeba]
 gi|109715348|emb|CAK00356.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           acinonychis str. Sheeba]
          Length = 350

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 163/323 (50%), Gaps = 20/323 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++++ +E +IQ+   +++   + T  + I S+F GGGT
Sbjct: 8   LYIHIPFCNNKCGYCAFNSYENKHELKEE-YIQALCLDLKHALKQTHEK-IESVFIGGGT 65

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N ++S++ EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 66  PNTLSVKSFERIFESIHQNASLSADCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 125

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ S A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 126 REDKLLFLERQHSKSIAPVIEVIFKSGIENISIDLIYNTPLDNEKSLKEELKLAKELPIN 185

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K  K      PS    VD  N+ +          YE+SN++   
Sbjct: 186 HLSAYALSVEKNTNLEKNAKK-----PS---CVDFDNVVKETLEGFSFKQYEVSNYA-RN 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  L+          + E 
Sbjct: 237 YQVKHNLAYWEAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLQR---------QVEP 287

Query: 321 LSSEQQADEFLMMGLRLREGISV 343
           LS + +  E L +GLR   G+ +
Sbjct: 288 LSGKDKRLEKLFLGLRCILGVEI 310


>gi|312129610|ref|YP_003996950.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella
           byssophila DSM 17132]
 gi|311906156|gb|ADQ16597.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella
           byssophila DSM 17132]
          Length = 376

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 172/334 (51%), Gaps = 18/334 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC + C YCDF  H       +   + +   E++        +++ +++FGG
Sbjct: 1   MHLYLHIPFCKQACHYCDF--HFSTQLSYKAKMVDAMCKEIELNSSYLVEKNLETLYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  I  ++++ +  E T+EANP  +  +  Q +++ GV RISLG+Q
Sbjct: 59  GTPSLLSNSELEKVLKSIQYHYSLENIKEFTLEANPDDIHPDRLQLWKELGVTRISLGIQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK---QTMTQWEM---EL 191
           +  E  L+F+ R H   E   A+ L     F   S DLIYA       T  Q E+   ++
Sbjct: 119 TFNEVFLKFMNRAHTGIEGERALQLLFEYGFEHSSADLIYAKTGYHLDTERQAEILKKDI 178

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +    Y + H+S Y LTIE  T+F K      L   SE  +V+ Y +      + G   Y
Sbjct: 179 EILSRYPLKHVSAYHLTIEPDTVFSKW----KLAEVSEEYSVEQYKIVTDTLGSMGYEQY 234

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G+ ++HN  YW+  +Y+GIGP AHS     S +  I+   H   ++  + + 
Sbjct: 235 EVSNFAKDGSYAIHNSAYWKGHEYLGIGPSAHS-YNGNSRQWNIA---HNHKYMSAIEE- 289

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           G    E E LS  ++ +++L+ GLR   G+S+K+
Sbjct: 290 GRIPCEVEILSKAEKLNDYLLTGLRTIWGVSLKE 323


>gi|255348415|ref|ZP_05380422.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70]
 gi|255502956|ref|ZP_05381346.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70s]
          Length = 376

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 174/332 (52%), Gaps = 17/332 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P   ALI D I          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPP---ALIQD-ILVALEAQHATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
           +A+S  + H+S+Y LTI+  T FYK  K    +LPS   ++    +    + +    G  
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKR---ILPSIADDDSLAQMALAAEELLENQGFT 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+++++   A S HN  YW    ++G+G  A S+   G     +S   H   +L+   
Sbjct: 235 RYELASYAKNQAASKHNTYYWTAKPFLGLGVSA-SQYLHGIRSKNLSRISH---YLRAAH 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           ++   +   E L   ++  E L + LRL + I
Sbjct: 291 QHLPTLESMEELPPNERIKETLALRLRLCDPI 322


>gi|167765247|ref|ZP_02437360.1| hypothetical protein BACSTE_03635 [Bacteroides stercoris ATCC
           43183]
 gi|167696875|gb|EDS13454.1| hypothetical protein BACSTE_03635 [Bacteroides stercoris ATCC
           43183]
          Length = 337

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 170/327 (51%), Gaps = 9/327 (2%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +I+FGGGTPS +  ++   + + I K + +    EIT+EANP  +        +    
Sbjct: 11  VETIYFGGGTPSQLAEEDFREVFETIRKYYGMEHCREITLEANPDDLTEAYAAMLQNLPF 70

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+G+Q+ ++ +L+ L R HNA++A+ A+   R+  F  +S DLIY LP +T  +W+ 
Sbjct: 71  NRISMGIQTFDDSTLKLLNRRHNAAQAVNAVKHCRHAGFNNISIDLIYGLPGETDERWKR 130

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ+A+S  V+H+S Y LT E+GT  Y++ +   +    E  +V  ++       + G  
Sbjct: 131 DLQQAVSLNVEHISAYHLTYEEGTRIYELLQAHRIREVDEESSVRFFSTLIDTLGSAGYE 190

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN       S HN +YW+   Y+G GP AHS           S+EK+  +      
Sbjct: 191 HYEISNFCRSDMYSRHNTSYWKGIPYLGCGPSAHSFNTDTREWNVASLEKYIHAI----- 245

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQG 366
           +N   + E+E L      +E +M  +R R G+ + D E   G+ L   C    R     G
Sbjct: 246 ENNQRLSEQEHLDRTTCYNECIMTSIRTRWGVPLNDIEQKFGKELWQYCFDMARPHLDCG 305

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +E    +RL  +++G+ + D +I++L
Sbjct: 306 NLEIYDNNRLCLSRKGIFVSDGIISDL 332


>gi|222834342|gb|EEE72819.1| predicted protein [Populus trichocarpa]
          Length = 214

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 124/192 (64%), Gaps = 5/192 (2%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + ++ EIT+EANP + E + F+ +R AGV R+S+GVQS +++ L+ +GR H+ ++A AA+
Sbjct: 1   MEADCEITMEANPGTFETDRFRAFRAAGVTRLSIGVQSFDDRLLQAVGRVHDGAQARAAV 60

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             A + F   + DL+YALP QT      +L  A+S+A  HLS+Y LTIE  T F K    
Sbjct: 61  REAADSFETFNIDLMYALPGQTELDLARDLDVAMSFAPPHLSVYHLTIEPNTYFAKFPP- 119

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
               +P +++A D+ +   + T+A G+  YEIS ++  G +  HN NYW++GDY+GIG G
Sbjct: 120 ---AIPEDDLAYDMLDRITARTAAAGMQRYEISAYAREGHQCWHNRNYWQFGDYLGIGAG 176

Query: 282 AHSRVKVGSHRV 293
           AHS++   +HR+
Sbjct: 177 AHSKLSF-AHRI 187


>gi|228902842|ref|ZP_04066986.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 4222]
 gi|228856798|gb|EEN01314.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 4222]
          Length = 356

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 164/331 (49%), Gaps = 10/331 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKA 128
           S+ +IF GGGTP+ +  +    +L+ I ++    + N E+T EANP  +         + 
Sbjct: 30  SMKTIFVGGGTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEG 89

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNRIS GVQ+  ++ L  +GR H   +A  AI  A+ + F  ++ D+IYALP QT+   
Sbjct: 90  GVNRISFGVQTFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDV 149

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L  A +  V H S Y L +E  T+FY +   G L LP E+    +Y +       HG
Sbjct: 150 KETLDIAFTLGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHG 209

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEISN S    +S HNL YW   +Y G G GAHS V  G     +   K    +   
Sbjct: 210 YNQYEISNFSKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNK 265

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QR 364
           + + G   ++   ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q 
Sbjct: 266 IDETGFPYLDVHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQE 325

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG +E      +R T++G  + + V  +  +
Sbjct: 326 QGLLEESD-GYVRLTRKGKLLGNEVFQSFLI 355


>gi|295099654|emb|CBK88743.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium cylindroides T2-87]
          Length = 357

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 186/381 (48%), Gaps = 37/381 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISS 73
            VY+H PFC   C YCDF              I +  T+ +WM Q+             +
Sbjct: 3   AVYLHVPFCDSICAYCDFC-----------RIITNEDTKSKWMAQIIEEIKQKNIHKADT 51

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPS +  +        IA  + VS   E T+E NP S+++   Q Y+K GVNRI
Sbjct: 52  LYFGGGTPSSLTCEQFK----KIASLFNVSK--EFTVECNPESLDLEKIQLYKKLGVNRI 105

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+  ++ L+ + R H   +    I L + N    +S DL+YALP+Q++   + +L+
Sbjct: 106 SLGVQTFNDRLLKVINRKHRKEDIFQVIQLLKENGIDNISIDLMYALPEQSLEDIKKDLE 165

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L   + HLS+Y L IE+ ++F + +    L    E++  D+Y L        G   YE
Sbjct: 166 IFLDLDIKHLSIYSLQIEENSIFGRQN----LKPVDEDIEADMYELICRTMEKAGYIHYE 221

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS+    G  S HNL YW+  D+IG+G GA  +     +    S++ + ES         
Sbjct: 222 ISSFCKPGYHSKHNLAYWQDEDFIGLGCGASGKENNVRYDNTRSLKTYIES-------GA 274

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
           +  + +E  + + +A   +MM LR   G+ ++ W     ++   + +  L++   + +++
Sbjct: 275 NPYIYEE--TQKDKAFNAIMMALRTTFGLDIQKWNQRYDQDFIKKYQSILEKYHDVLKLE 332

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              L  ++  M +L++++ + 
Sbjct: 333 NGILYPSREAMEILNTILVDF 353


>gi|282880323|ref|ZP_06289037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305825|gb|EFA97871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella timonensis CRIS 5C-B1]
          Length = 386

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 190/390 (48%), Gaps = 25/390 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---------PRS 70
           G+Y+H PFC  +C YC F S        ++ ++ +   E++  R                
Sbjct: 3   GLYLHIPFCASRCIYCGFYSTTNLSL--RQKYVDALCQELRLRRDYLSDIETNLSEDTHL 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNW------TVSSNVEITIEANPSSVEVNNFQG 124
           I +I+ GGGTPS + P  +  I + I   +      T+ S  E+T+E NP  +  +  + 
Sbjct: 61  IRTIYIGGGTPSQLTPAQLQQIFEVIGSIYFNGNLSTMRSQCEVTLECNPDDISPSFVEF 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
             ++ +NRIS+GVQ+     L FL R H A +   A++  R I    +S DL++  P Q+
Sbjct: 121 IEQSPINRISMGVQTFSNAQLNFLHRRHQAEDVATAVNRLREIGVDNISIDLMFGFPNQS 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  WE ++ + L   V+H+S Y L  E+GT   ++ K   +    + +++ +Y       
Sbjct: 181 LAAWERDILQVLDLGVEHISAYSLMYEEGTPLNQLLKSNKIHEIDDELSLQMYQALVHHL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A G   YEISN +  G +S HN +YW    Y+GIG  AHS   + S +  +S  K   +
Sbjct: 241 KAAGYEQYEISNFAKPGKQSRHNSSYWHAIPYLGIGAAAHS-YNIKSRQWNVSDLK---T 296

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           ++  +++ G    EKE+L ++ + ++ +   LR  +GI +        R+  ++  +   
Sbjct: 297 YITAIQQ-GKIPAEKEWLDADTRYNDLVTTALRTSQGIRLSALTP-RYRSFLLQQAKRFI 354

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            Q  +E ++   +R T  G+ + D+++ +L
Sbjct: 355 DQHLME-IEGDYIRLTTEGIYISDAIMTDL 383


>gi|78044379|ref|YP_359272.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996494|gb|ABB15393.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 376

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 195/379 (51%), Gaps = 23/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+KKC YC F S       G  +++     E++W +    P  + +I+ GGG
Sbjct: 9   ALYLHMPFCLKKCHYCAFTSFPAPAGEGVFSYLSLIKKELEWRKDFLAP--LKTIYVGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +   N    L  I   +     +E T+EANP ++     +  +  GVNR+SLG QS
Sbjct: 67  TPTSL-SLNALEKLGEIISPYISDKLLEFTVEANPGTLNREKIRLLKDLGVNRVSLGAQS 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L  +GR H A++ + A +L R      ++ DLI   P +    +   ++ A+S  
Sbjct: 126 FNDEILLKMGRAHTAAQTLEAYNLLREEGINNLNLDLIIGYP-EGRESFINTVKTAISLK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+SLY L +E+ T  Y+    G+++LP E+  V  +    ++   +G   YEI+N + 
Sbjct: 185 PEHISLYDLKVEENTRLYEEVAKGEIILPEEDEVVLYWEEAINLLEENGYERYEIANFAR 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL---KMVRKNGHAV 315
               S HNL YW    Y+GIG  AHS  KVG +R       +P + L   +M+    +  
Sbjct: 245 NQQYSRHNLTYWENKPYLGIGLAAHS--KVGLYRFW-----NPNTMLEYREMLLTGKNYG 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----V 371
            EK  L+ E+ A E +++ LRL+ G+++++++    R+   E    +Q+  FIE     +
Sbjct: 298 EEK--LTLEEDAKEEIILRLRLKTGLNLQEFQKKYRRDFMAEFGDKIQK--FIELGLLFL 353

Query: 372 QFSRLRCTQRGMTMLDSVI 390
           +  RL  T++G  + ++V+
Sbjct: 354 EDDRLFLTRKGSFVANTVL 372


>gi|303235933|ref|ZP_07322536.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella disiens FB035-09AN]
 gi|302483806|gb|EFL46798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella disiens FB035-09AN]
          Length = 388

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 192/395 (48%), Gaps = 33/395 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH---------VRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
            +Y+H PFC  +C YC F S          + RY V     +   L E +         +
Sbjct: 3   SLYIHIPFCASRCIYCGFYSTLTPKTRTETIDRYVVA----VCKELVEQKNFVFQDNNET 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYR 126
           + +I+FGGGTPS + PQ+I  I   I  N++      +++EI+ E NP  V     +   
Sbjct: 59  LETIYFGGGTPSQLAPQHIEKIFQTIEDNYSDKMEKLADMEISFECNPDDVTEEFAENMC 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
              +NRIS+G Q+  E  L+FL R H A++   AI  L R     +S DL++  P++T+ 
Sbjct: 119 HFPINRISMGAQTFSEARLKFLRRRHKANDVKMAIDRLHRADIHNISIDLMFGFPEETLQ 178

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITS 244
           +WE ++++A++  V+HLS Y L  E+GT  Y++ + G +    E +   +Y+ L   + +
Sbjct: 179 EWEDDIEKAIALNVEHLSAYSLMYEEGTPLYRLLEQGKVKDMDEELYRTMYDKLIDRLVA 238

Query: 245 AHGLHAYEISNHSFL------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           AH    YEISN + L         S HN  YW    YIG+G  AH            +++
Sbjct: 239 AH-YEQYEISNFAKLINNGSSPYRSRHNSAYWANQSYIGVGASAHGYNHQQRRWNVDNLQ 297

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K+ E       +NG  + E E +      ++ +   LR R+GI +K+ E     ++ I+ 
Sbjct: 298 KYMEGI-----ENGTPIYEAENIDKPTHFNDTVTTALRTRKGIDLKNLEEPFKTHI-IKA 351

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +    +G +  ++   L  T+ G+ + D++++ L
Sbjct: 352 SKLFIERGLLS-LENEHLHLTREGIYVSDAIMSEL 385


>gi|302757115|ref|XP_002961981.1| hypothetical protein SELMODRAFT_64240 [Selaginella moellendorffii]
 gi|300170640|gb|EFJ37241.1| hypothetical protein SELMODRAFT_64240 [Selaginella moellendorffii]
          Length = 410

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 25/355 (7%)

Query: 20  GVYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             YVH PFC ++C YCDF                E+++     E+   R  +   ++ ++
Sbjct: 3   AAYVHLPFCKRRCHYCDFPIVALGESSSNAGSTMESYVDLVCQEIAAERSPSR-GALQTV 61

Query: 75  FFGGGTPSLIEPQNIALILDGI-AKN-WTVSSNVEITIEANPSSVEVNNF-QGYRKAGVN 131
           FFGGGTPSLI    +  I+  + AK+ ++  + +EI++E +P +   +   +  +  G+N
Sbjct: 62  FFGGGTPSLIPIPLLQRIIQALEAKHGFSRDAPMEISMEMDPGTFSRDYLTEAIQSCGIN 121

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQ+ ++  L+  GR+H   +   +I   ++     S DLI +LP  T+  W   L
Sbjct: 122 RVSLGVQAFDDDLLKLCGRSHCLDDVFQSIEWIKDSLQNWSLDLISSLPHHTLASWRKSL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++A++ +  H+S+Y L IE+GT F  ++K G   LPS++ + + + L  S+    G   Y
Sbjct: 182 EQAIAASPAHVSIYDLQIEQGTKFGNLYKPGMDPLPSDDDSAEFFKLGSSMLREAGYDHY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR-- 309
           EISN++  G +  HNL YW+   Y   G G+ S V     RV  S  K    + K V   
Sbjct: 242 EISNYARKGFQCRHNLVYWKNQGYYAYGLGSTSFVD--GKRVKRS--KRMREYAKFVEAL 297

Query: 310 KNGHAVVEKEFLSSEQQA-------DEFL---MMGLRLREGISVKDWEMLAGRNL 354
             G  V+ +    S  +A       D  L   M+ LRL EGI ++ +E   G  L
Sbjct: 298 AAGSPVLPESLEGSRTEAVLPESVEDRILDTVMLALRLAEGIDLRRFEAEFGSEL 352


>gi|302775376|ref|XP_002971105.1| hypothetical protein SELMODRAFT_64239 [Selaginella moellendorffii]
 gi|300161087|gb|EFJ27703.1| hypothetical protein SELMODRAFT_64239 [Selaginella moellendorffii]
          Length = 410

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 25/355 (7%)

Query: 20  GVYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             YVH PFC ++C YCDF                E+++     E+   R  +   ++ ++
Sbjct: 3   AAYVHLPFCKRRCHYCDFPIVALGESSSNAGSTMESYVDLVCQEIAAERSPSR-GALQTV 61

Query: 75  FFGGGTPSLIEPQNIALILDGI-AKN-WTVSSNVEITIEANPSSVEVNNF-QGYRKAGVN 131
           FFGGGTPSLI    +  I+  + AK+ ++  + +EI++E +P +   +   +  +  G+N
Sbjct: 62  FFGGGTPSLIPIPLLQRIIQALEAKHGFSRDAPMEISMEMDPGTFSRDYLAEAIQSCGIN 121

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQ+ ++  L+  GR+H   +   +I   ++     S DLI +LP  T+  W   L
Sbjct: 122 RVSLGVQAFDDDLLKLCGRSHCLDDVFQSIEWIKDSLQNWSLDLISSLPHHTLASWRKSL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++A++ +  H+S+Y L IE+GT F  ++K G   LPS++ + + + L  S+    G   Y
Sbjct: 182 EQAIAASPAHVSIYDLQIEQGTKFGNLYKPGMDPLPSDDDSAEFFKLGSSMLREAGYDHY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR-- 309
           EISN++  G +  HNL YW+   Y   G G+ S V     RV  S  K    + K V   
Sbjct: 242 EISNYARKGFQCRHNLVYWKNQGYYAYGLGSTSFVD--GKRVKRS--KRMREYAKFVEAL 297

Query: 310 KNGHAVVEKEFLSSEQQA-------DEFL---MMGLRLREGISVKDWEMLAGRNL 354
             G  V+ +    S  +A       D  L   M+ LRL EGI ++ +E   G  L
Sbjct: 298 AAGSPVLPESLEGSRTEAVLPESVEDRILDTVMLALRLAEGIDLRRFEAEFGSEL 352


>gi|225388521|ref|ZP_03758245.1| hypothetical protein CLOSTASPAR_02257 [Clostridium asparagiforme
           DSM 15981]
 gi|225045415|gb|EEG55661.1| hypothetical protein CLOSTASPAR_02257 [Clostridium asparagiforme
           DSM 15981]
          Length = 397

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 170/360 (47%), Gaps = 47/360 (13%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCDF S  R      E +++  + E++          + ++F GGGTPS++EP+ I  + 
Sbjct: 2   YCDFLS-FRTLAAVHETYVEQLIREIEAEGASCQEYQVVTVFIGGGTPSVLEPELIRDVC 60

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
             + + + V+ + EITIE NP ++  N    YR AG+NR+S+G+QS + + L  LGR H+
Sbjct: 61  LAVRRAFDVAQDAEITIEVNPGTLLQNKLHIYRAAGINRVSIGLQSADNRELENLGRIHS 120

Query: 154 ASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKG 212
             E + +   AR   F  ++ DL+  +P QT+  W   L++      +H+S Y L IE G
Sbjct: 121 FEEFLKSFQCARMAGFANINVDLMSGIPGQTLESWRNTLKKVTMLKPEHISAYSLIIEPG 180

Query: 213 TLFYKMHKDG--------------------DLV---------LPSENVAVDLYNLTQSIT 243
           T F+  +  G                    D           LP E     +Y+LT++  
Sbjct: 181 TPFWDRYGAGIEKTAAKSAPQPGTCPGEAPDRFGLRRRDYPELPDEEEENRIYHLTRTFL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA--------I 295
           +  G   YEISN++  G    HN+ YW   +Y+G+G GA S   +G  R          +
Sbjct: 241 AEQGYERYEISNYARPGFACRHNVGYWTEVEYLGLGLGASS--FLGGCRFCNERDLERYL 298

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            ++   E W + +R           LS E + +EF+ +GLR+  GIS  D+    G  LD
Sbjct: 299 GLDFAAEGWAERLRPQFTR------LSREARMEEFMFLGLRMIRGISEIDFVATFGVKLD 352


>gi|224541314|ref|ZP_03681853.1| hypothetical protein CATMIT_00474 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525751|gb|EEF94856.1| hypothetical protein CATMIT_00474 [Catenibacterium mitsuokai DSM
           15897]
          Length = 363

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 167/329 (50%), Gaps = 21/329 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C YCDF     R     E F+  +L  ++          + +I+ GGG
Sbjct: 5   ALYIHIPFCDHICSYCDFAKVYYR-----EEFVLQYLERLKEELDTLPHHPMETIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    + ++L+ I   +     +E TIE NP S  ++  +     GVNR+S+GVQ+
Sbjct: 60  TPSALSLNQLKMLLNMIDP-FVGDGTLEYTIEVNPESATLDKLEIMHLHGVNRLSVGVQT 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ + R H +S A   +  A+ I F  +S DL+Y LP QT+   + +LQ ALS  
Sbjct: 119 FDNTLLKRIERYHTSSIAKEVVRNAKAIGFKHISIDLMYGLPGQTLEDVKEDLQIALSLP 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++HLS Y L +E+ T  Y  ++  D    +E +  D   + ++++ A G H YE+SN++ 
Sbjct: 179 INHLSYYSLILEEHTRLYDNYEPLD--EETEGIWSDY--IVETLSRA-GFHRYEVSNYAL 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN  YW Y +Y G+G GA       + ++   +  H  S    ++      +EK
Sbjct: 234 GNHESYHNKVYWHYENYYGVGIGA-------TGKIDDELISHSRSLTDYLQGKNTIYIEK 286

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE 347
           E  + E      LMM LRL EG+ + +++
Sbjct: 287 E--TIEDTMFNHLMMSLRLEEGLDLDEFK 313


>gi|313681728|ref|YP_004059466.1| oxygen-independent coproporphyrinogen iii oxidase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154588|gb|ADR33266.1| oxygen-independent coproporphyrinogen III oxidase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 353

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 150/266 (56%), Gaps = 16/266 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRS-ISSIFFG 77
           +Y+H PFC  KC YC FNS+V ++ + +E ++ + L ++Q   +R   G  + I ++F G
Sbjct: 3   LYIHIPFCDSKCSYCAFNSYVDKFAL-REAYMNALLIQLQSELLRFNAGKDNPIETVFIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS ++P     I + I  +  ++ + EIT EANP+S      +G  + G+NR+S GV
Sbjct: 62  GGTPSTVDPSLYRPIFEMI--DPYLAPHCEITSEANPNSATRTWMEGMFELGINRLSFGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR H+   A+ AI  A  I +  +S DLIY +   T    + ++ +A S
Sbjct: 120 QSFNNEKLKTLGRAHHTQHALEAIRTASAIGYKHLSIDLIYGVKGDTKPLLKADIDQAFS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +DH+SLY LTIE+ T F K  +  D     E + +  + L + IT   G   YEISN 
Sbjct: 180 LPIDHISLYALTIEEETAFEKTPEMAD-----EKLELTRW-LFREITD-RGFEQYEISN- 231

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGA 282
            F    S+HN+ YW +  YIG+G GA
Sbjct: 232 -FGTYRSIHNIGYWEHKPYIGLGAGA 256


>gi|291280403|ref|YP_003497238.1| oxygen-independent coproporphyrinogen III oxidase [Deferribacter
           desulfuricans SSM1]
 gi|290755105|dbj|BAI81482.1| oxygen-independent coproporphyrinogen III oxidase [Deferribacter
           desulfuricans SSM1]
          Length = 356

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 189/373 (50%), Gaps = 28/373 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFC  KC YC F S +  +     + ++++L  ++    +       +I+ GG
Sbjct: 2   LGLYIHIPFCKSKCKYCGFFS-ISNF---DTDIVKNYLHAIEKELSVYTDYLFDTIYIGG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++   +  +L  I K   +    E T EANP S++    +  +  GV+RIS+GVQ
Sbjct: 58  GTPSVLDYDELENLLKAIQK-LNLKKLKEFTFEANPESIDETKIKILKDCGVSRISIGVQ 116

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+   L+FLGR H   +    I+  +      + D+I+ +P  +  +    L +     
Sbjct: 117 SLDNNVLQFLGRIHQVKDVYTCIYFLKKHNFNFNVDVIFDIPTVSYKKIYNTLTKLCDLN 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y  + +  T F   +K GD+    ++  +++ +  +      G H YEISN + 
Sbjct: 177 PNHISAYSYSYD--TAFLSEYK-GDM----KSHLIEIVDFLKD----RGYHRYEISNFAK 225

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ESLHN+ YW+ GD+IG+G  AHS   + + RV  S   HP + +K   +N       
Sbjct: 226 KGYESLHNITYWKMGDFIGVGAAAHSMKNLKNCRVRYS---HP-AEVKRYIENSFCFDNI 281

Query: 319 EFLSSEQQA-DEFLMMGLRLREGISVKDWEMLAGRNLDI-ECERNLQRQGFIERVQFSRL 376
           E +  E++   E L+ GLRL  G+     E+   + LDI +    L ++G++E  +  R+
Sbjct: 282 EIIRDEKEILLENLVFGLRLTSGV-----ELEIFKKLDILDLLSYLIKKGYLENNE-DRV 335

Query: 377 RCTQRGMTMLDSV 389
             T++G   LD V
Sbjct: 336 CLTKKGTLFLDYV 348


>gi|15612212|ref|NP_223865.1| coproporphyrinogen III oxidase [Helicobacter pylori J99]
 gi|4155741|gb|AAD06720.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE [Helicobacter
           pylori J99]
          Length = 345

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 163/324 (50%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YIQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESIHQHASLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P    T  + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIEIIFKSGIENISIDLIYNTPLDNETSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS   +VD  N+ + +        YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---SVDFDNVVREVLEGFFFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 282 TLNKQDKCLEKLFLGLRCELGVEL 305


>gi|153003140|ref|YP_001377465.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaeromyxobacter sp. Fw109-5]
 gi|152026713|gb|ABS24481.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaeromyxobacter sp. Fw109-5]
          Length = 379

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 10/347 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVH+P+C  +CPYCDF     R   G+                  G   +S ++
Sbjct: 2   ARRFGIYVHFPYCAHRCPYCDFAVTTERPPEGRRYLAALLAELELRAGAFDGLAPVS-VY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +P  +A +L  +     + +  E+TIEANP S +    + +R AGVNR+S+
Sbjct: 61  LGGGTPSLWDPDEVAALLAALRARLALPAGAEVTIEANPESTDRARLRAWRAAGVNRVSV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +   L  LGR H    A  AI  A      +S DLIY   + T+     +  RA 
Sbjct: 121 GVQSFDAGVLAKLGRRHGPDAAERAIREAAEELGNVSVDLIYGARRSTVEIARADAARAA 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +    H+S Y LT++ G +       +M ++G L LPS++         ++     GL  
Sbjct: 181 ASGAAHVSAYALTLDPGIMAEEVPLARMRREGRLPLPSDDEVAAQAAAIRAALRRAGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH--SRVKVGSHRVAISIEKHPESWLKMV 308
           YEISN +  G ES HN  YW    Y+G+G GA+  +R + GS+R      +   ++L   
Sbjct: 241 YEISNFARPGLESAHNRLYWTAESYLGLGAGAYGCARGEAGSYRYGNL--RDARAYLDAA 298

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                   E++ ++   + +E +M+GLR  EG+ +     +  R  D
Sbjct: 299 LGRRSPTAEEDRIAPAAERNERMMLGLRTLEGVPLATLSPIQSREAD 345


>gi|289705014|ref|ZP_06501427.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Micrococcus luteus SK58]
 gi|289558273|gb|EFD51551.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Micrococcus luteus SK58]
          Length = 426

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 165/343 (48%), Gaps = 21/343 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTG-----PR 69
           +  +YVH PFC  +C YCDFN++         G+ ++ +S +TE+ +   +        R
Sbjct: 35  TFSLYVHVPFCTVRCGYCDFNTYTAVDLGPGAGRGDYWESAVTELDFAADVLASSDVPAR 94

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTP+L+   ++  IL      + ++   E+T EANP ++     +     G
Sbjct: 95  PLHTVFFGGGTPTLLPAADLVRILQAAVDRFGIAPGAEVTTEANPDTITPEYARELAAGG 154

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+SLG+QS     L  L R H      AA+  AR     +S DLIY    +++  W  
Sbjct: 155 FTRLSLGMQSAVPHVLATLERTHRPESVPAAVAAAREAGLEVSLDLIYGTAGESLADWRA 214

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ A++ A DH+S Y L +E+GT        G++     +   D Y L + + SA G  
Sbjct: 215 TLEAAVALAPDHVSAYSLIVEEGTKLGAQVARGEVADVDPDDQADKYLLAEELLSAAGYR 274

Query: 250 AYEISN--HSFLGA---ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI--EKHPE 302
            YE+SN      G+    + HN+ YW   D+ GIGPGAH      SH   +     KHP 
Sbjct: 275 WYEVSNWARDPQGSGVHRARHNVAYWEDQDWWGIGPGAH------SHLAGVRFWNAKHPA 328

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           ++ + +       V +E   ++ +  E +M+ +R  +G+   +
Sbjct: 329 AYAQRLATGVTPAVGRERPDADARRLERIMLAVRTVDGLPTAE 371


>gi|295111117|emb|CBL27867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synergistetes bacterium SGP1]
          Length = 396

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 160/324 (49%), Gaps = 16/324 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ-WMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC F S  RR   G+   ++ +   E + W  +L G     +++ GG
Sbjct: 23  LYLHVPFCAAKCGYCSFYS--RRAGDGEVAAWLDALEAEARAWRDRLGGRVPPRTLYVGG 80

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P +   +L  +     +S   E ++EANPSS+   +   +R  G  R+SLGVQ
Sbjct: 81  GTPSLLTPGDWRRVLRILEVMADLSPLEEASVEANPSSLTKEHLAVWRDGGFTRVSLGVQ 140

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL++  LR +GR H+A+ A+ A+ +       +S DLI+ LP QT+  W   L+  L+  
Sbjct: 141 SLDDGELRRIGRLHDAAGALRAMAMVLGAGLHLSVDLIFGLPGQTLRSWSASLRGVLAAG 200

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS YQLT+E      +      L LP       LY   Q   + +    YEIS+ + 
Sbjct: 201 VGHLSTYQLTLEPDAPMSRQ----SLSLPD---GYPLYRYAQWFLAKNKFLQYEISSFAP 253

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN-GHAVVE 317
            GAE  HNL YWR    + +GP A   +         ++E +    L+  R      +  
Sbjct: 254 SGAECRHNLAYWRQEPVLPLGPAAWGYLDGWRWSNPPTLEAY----LEAARCGFPDPLAG 309

Query: 318 KEFLSSEQQADEFLMMGLRLREGI 341
            E LS   +A E  ++ LR R GI
Sbjct: 310 AERLSPRARALEAAILALRTRWGI 333


>gi|304382658|ref|ZP_07365152.1| possible coproporphyrinogen dehydrogenase [Prevotella marshii DSM
           16973]
 gi|304336283|gb|EFM02525.1| possible coproporphyrinogen dehydrogenase [Prevotella marshii DSM
           16973]
          Length = 381

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 184/376 (48%), Gaps = 11/376 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YC F S    +   QE ++ +   EM           + +++ GGG
Sbjct: 11  GIYIHIPFCASRCIYCAFYSST--HAEWQEAYVDALCREMSMRADYLQDAPLETVYLGGG 68

Query: 80  TPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TPS +    +  + + +  K +      EIT+E NP  V        R+  VNR+S+G Q
Sbjct: 69  TPSQLSITCLHRLFNHLYTKVYKGCCPTEITMECNPDDVTPEWVSALRELSVNRVSMGAQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ LRFL R H A+E   A+   R      ++ DL++  P +T   W  ++ RAL+ 
Sbjct: 129 TFDDRRLRFLHRRHTAAEVFRAVERLRAADINHINIDLMFGFPDETREDWTEDIDRALAL 188

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++HLS Y L  E+GT  Y + + G +    E V+  +Y       +A G   YEISN +
Sbjct: 189 NIEHLSAYCLAYEEGTPLYHLREQGRVKELDEEVSRSMYETLIDRMTAAGYEHYEISNFA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  SLHN NYW    YIG+G  AHS     S +  IS     + ++  + + G    E
Sbjct: 249 RPGHHSLHNANYWNATPYIGLGASAHS-YDGASRQWNIS---DTQRYIASIAE-GIVPAE 303

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L ++ + ++ +   LR   GI +        RN  ++  R     G +  V+  RL 
Sbjct: 304 RETLDADTRYNDLVTTALRTARGIYLPSL-CADRRNYLMQNARRHIENGLLA-VEADRLL 361

Query: 378 CTQRGMTMLDSVIANL 393
            T++G+ + D+V+++L
Sbjct: 362 LTRQGLFVSDTVMSDL 377


>gi|119486127|ref|ZP_01620187.1| coproporphyrinogen III oxidase [Lyngbya sp. PCC 8106]
 gi|119456618|gb|EAW37747.1| coproporphyrinogen III oxidase [Lyngbya sp. PCC 8106]
          Length = 383

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 164/309 (53%), Gaps = 12/309 (3%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + + +IFFGGGTPSL+    +  ILD + + + + +  EI++E +P + +++  QG+   
Sbjct: 35  QPLETIFFGGGTPSLLSVSQLGQILDRLEQRFGIDAEAEISMEMDPDTFDLHRLQGFINL 94

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           G+NR+SLGVQ+ +++ L+  GR+H  ++   AI  IH A       S DLI  LP QT+ 
Sbjct: 95  GINRVSLGVQAFQDELLQACGRSHTVADVWKAIDFIHTAG--VSNYSLDLISGLPHQTLE 152

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W+  +++ L+    H+S Y L +E  T+F + +  G+  LP++     +Y   Q I + 
Sbjct: 153 LWQQSVEQVLTLNPPHISHYDLIVEPKTVFGRYYSPGESPLPTDESTTAMYRWAQKILTQ 212

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN++  G +  HNL YW    Y G G GA S ++   +R  ++  +  + + 
Sbjct: 213 AGYTHYEISNYAQPGMQCRHNLVYWHCQPYYGFGMGAASYLQ--GYR--LTRPRQTQLYH 268

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DI-ECERNL 362
           + V         +    +  Q  E LM+GLRL EG++++      G+    DI  C    
Sbjct: 269 QWVHSEDQMQDAEWVNRACDQLLESLMLGLRLSEGLNLRSLSQRFGQQTVKDILYCLHPY 328

Query: 363 QRQGFIERV 371
           Q QG++E V
Sbjct: 329 QEQGWVEVV 337


>gi|148240097|ref|YP_001225484.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 7803]
 gi|147848636|emb|CAK24187.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 7803]
          Length = 432

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 156/335 (46%), Gaps = 14/335 (4%)

Query: 21  VYVHWPFCVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSI 74
            Y+H PFC ++C YCDF        V+         I  +L   +Q +R       ++++
Sbjct: 9   AYLHIPFCHRRCFYCDFAVVPLGDRVQALDGPGSGSIALYLDSILQEIRLSPAGPPLATV 68

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+    +  +L  +   + +    E+T+E +P+S  +++     + GVNR+S
Sbjct: 69  YIGGGTPSLLTADQVGGLLAALTDRFGLQQGAEVTLEMDPASFALDDLSALVRHGVNRVS 128

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-----LARNIFPRMSFDLIYALPKQTMTQWEM 189
           LG QS ++  L  LGR H   + + A       L        S DLI  LP Q    W  
Sbjct: 129 LGGQSFDDGVLAALGRRHRRKDVLEACRWMQRFLQDGRLRSWSLDLIRNLPDQDDAAWAA 188

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  A++    HLS+Y L+IE GT+F +  + G L LP E+ A D    T       G  
Sbjct: 189 TLSEAVALQAPHLSIYDLSIEPGTVFARREQQGTLRLPDEDGAADRIAFTTQRLFEAGYC 248

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN+S+ G  S HN  YW    +   G GA S    G       I +    WL+  +
Sbjct: 249 RYEISNYSWPGHASRHNRVYWSGAGWWAFGLGATS-APWGERFARPRIREAYALWLEQQQ 307

Query: 310 KNG-HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           + G H  + +E        D  L++GLR REG+ +
Sbjct: 308 QEGPHTSLLRESAQPLSLEDR-LLVGLRRREGVDL 341


>gi|261839946|gb|ACX99711.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 52]
          Length = 350

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 160/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 8   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALNQTDEP--IESIFIGGG 64

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N ++SS+ EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 65  TPNTLSVKSFERIFESIHRNASLSSDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 125 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 184

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS        N+ + +        YE+SN++  
Sbjct: 185 NHLSAYALSIEKNTNLEKNAKK-----PS---CTHFDNIIKEVLEGFSFKQYEVSNYA-R 235

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 236 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 286

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 287 TLSEQDKRLEKLFLGLRCVLGVEL 310


>gi|317503273|ref|ZP_07961327.1| coproporphyrinogen dehydrogenase [Prevotella salivae DSM 15606]
 gi|315665611|gb|EFV05224.1| coproporphyrinogen dehydrogenase [Prevotella salivae DSM 15606]
          Length = 384

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 165/332 (49%), Gaps = 15/332 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ------WMRQLTGPRSISS 73
           G+Y+H PFC  +C YC F S  +  +  Q+ ++     E+       +         + +
Sbjct: 3   GLYIHIPFCASRCIYCGFYSTTQ--QSLQQKYVDMLCHEIDLRASELFNLNTDSDNKLHT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++  + +  +L  I K W ++S   E+TIE NP  +             NR
Sbjct: 61  IYLGGGTPSMLSSEQLNQLLTYIYKVWGSLSDLKELTIECNPDDITEEFAVQLADLKFNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G Q+   + L+FL R HN  +   A+   R+     +S DL++  P +T+  W+ ++
Sbjct: 121 VSMGAQTFSNERLKFLHRRHNREDIFQAVTRLRHAGIQNISIDLMFGFPNETIVDWQRDI 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V+H+S Y L  E+GT  + M +   +    E  ++ +YN+  +  +  G   Y
Sbjct: 181 REAIDLGVEHISAYSLMYEEGTSLFNMREHQKIKEIDEETSLSMYNILINELTNAGYEQY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G  SLHN +YW    YIG+G  AHS +  G  +  IS   + + ++  +  N
Sbjct: 241 EISNFARPGFRSLHNSSYWHEIPYIGLGASAHSYLN-GIRKWNIS---NLKKYMDEIVCN 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                E E LS + Q ++ +   LR +EGI +
Sbjct: 297 K-LPQEIEILSKDTQYNDLITTALRTKEGIDL 327


>gi|294102149|ref|YP_003554007.1| oxygen-independent coproporphyrinogen III oxidase [Aminobacterium
           colombiense DSM 12261]
 gi|293617129|gb|ADE57283.1| oxygen-independent coproporphyrinogen III oxidase [Aminobacterium
           colombiense DSM 12261]
          Length = 370

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 18/331 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           + L VY+H PFC  KCPYC F S  R     ++ +++S   E++W  +  G +  I +++
Sbjct: 2   DPLSVYLHVPFCSVKCPYCAFYSQ-RGTDDEKDAYVRSIEKELRWWDRQYGEKPLIHTLY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +       +++ +  +     + EI+IEANP S+ V +   ++  GV R+SL
Sbjct: 61  VGGGTPTCLSVLQWQRLIESLVTHLERCLDTEISIEANPESLSVEHMALWKDWGVTRVSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL +  L +L R+H A+ A+ A+         +S DL++ L  Q++ +W   L   +
Sbjct: 121 GIQSLWDDELLWLKRHHTATRALWAVDQLLKYGFNVSGDLMFGLAGQSLKKWHHSLSGLV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V HLS+YQL+IE+G+++ KM   G             Y  +Q      G   YEI++
Sbjct: 181 HSGVSHLSIYQLSIEEGSVWGKMPPSG------LQNGYGHYRWSQWYLEEKGFSQYEIAS 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGP---GAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            +  G E  HN  YW   + + +GP   G +  V+  + R           ++  + ++ 
Sbjct: 235 FAKPGCECRHNQAYWFQKNVLPLGPSAWGYNDGVRFWNVRTL-------AEYVDRISQDK 287

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            AV  KE L  E++  EF ++ LR  +GI +
Sbjct: 288 SAVEGKECLDLEKRGREFAVLALRTSQGIDI 318


>gi|298708749|emb|CBJ30711.1| coproporphyrinogen III oxidase [Ectocarpus siliculosus]
          Length = 596

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 166/384 (43%), Gaps = 63/384 (16%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---------ENFIQSFLTEM------------ 59
           VYV+ PFC ++C YCDF   V   + G          +N ++                  
Sbjct: 55  VYVNLPFCRRRCFYCDFPIKVVGDRPGAAAAAAKPYVDNVVREIRATAAAAAIEAPKLPA 114

Query: 60  -------QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
                    M        + ++FFGGGTPSL  P+ + L+++ +   + +++  EI+IE 
Sbjct: 115 RGGAGGDDTMEHSGRGGGVKTLFFGGGTPSLCPPELVGLLIETVRNCYGIAAGAEISIEM 174

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRM 171
           +P + +    + +   G+ R+S+GVQS +   L   GR H+ ++   A+ L R       
Sbjct: 175 DPGTFDEARLEAFLALGITRVSMGVQSFDAGLLEACGRAHSLADVYQAVELLRKAKVDNF 234

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DL+  LPKQT+ QWE  L  A++    H+S+Y L +E GT F +    G+  LP +  
Sbjct: 235 SIDLMSGLPKQTVEQWEHTLSEAIATGAAHISVYDLQVEAGTPFGRWFSPGEAPLPEDET 294

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
             D+Y     +    G   YEISN++  G +S HN  YW    ++  G GA S V    +
Sbjct: 295 CADMYRTASGVLGQAGYDHYEISNYARPGFQSRHNRAYWENVPFLAFGNGAASFVD--GY 352

Query: 292 RVAIS----------IEKHPESWLKMVRKNGHAVVE---------------------KEF 320
           R +             E   E W K       A  E                     +E 
Sbjct: 353 RFSRPRGLPEYGQWVGELEEEGWDKATGAPRRAACEEVLPGGGGMGDGAGAEESRPSREA 412

Query: 321 LSSEQQADEFLMMGLRLREGISVK 344
           L  +   D+ +M+G RL+EG+ ++
Sbjct: 413 LERDALLDD-VMLGFRLKEGLDLR 435


>gi|152992050|ref|YP_001357771.1| coproporphyrinogen III oxidase [Sulfurovum sp. NBC37-1]
 gi|151423911|dbj|BAF71414.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurovum sp.
           NBC37-1]
          Length = 353

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 24/324 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFGG 78
            Y+H P+C  KC YC FNS+V ++    E ++Q+   ++ +   R  T   SI ++F GG
Sbjct: 3   AYIHIPYCDSKCHYCSFNSYVDKFDTRSE-YMQALYRQLSFELERFHTQKESIETLFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + P+    I D +  +  +  + EIT EANP+S   +  QG +  GVNRIS GVQ
Sbjct: 62  GTPSTVSPELYEPIFDLL--DPYLQKDAEITTEANPNSASNSWLQGMKTLGVNRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L+ L R H   +A   +  A+ + F  +S DLIY     T      ++++A   
Sbjct: 120 SFNTDKLKALNRAHTPKQAKKVVLAAKELGFEHISLDLIYNYQGDTKELLSDDIRQAFEL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            VDH+S Y+LTIE GT F       ++    E +A  + N  +      G   YEISN  
Sbjct: 180 PVDHISAYELTIEDGTRF---SSSPEVRQEDEKLAFFVANEIKK----RGFIQYEISN-- 230

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F   +S HN  YW   +YIG G GA   +K   +     I+ + ++ L++          
Sbjct: 231 FGTYQSRHNKGYWNLKNYIGAGAGAVGFLKDTRYYPQTDIDSYIQNPLQIT--------- 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGI 341
           +E LS E+   E + +GLR   GI
Sbjct: 282 EEHLSQEELLTEKIFLGLRSTIGI 305


>gi|302338523|ref|YP_003803729.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635708|gb|ADK81135.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           smaragdinae DSM 11293]
          Length = 392

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 167/336 (49%), Gaps = 26/336 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS---HVR---RYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           + L +Y+H PFC  KC YCDF S   H R   R    + + I+S  +  +W+R L   R+
Sbjct: 6   HDLSLYIHVPFCFDKCDYCDFFSIPHHGRPDNRLLDREFHLIESMGS--RWLRLLQC-RN 62

Query: 71  ISSIFFGGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           + +I+ GGGTPS I     + +  I+ G+ K   ++   E TIEANP  +  +       
Sbjct: 63  LETIYIGGGTPSSIGLDRLERLLSIIAGLIKKEGIAFEGEYTIEANPRDISPDLITLLES 122

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
             VNR+SLG+QSL +Q LR +GR+ + ++++ A+  L+     R S D+I  +P Q    
Sbjct: 123 YKVNRLSLGLQSLNDQDLRAIGRSGSRAQSLNALSVLSSRWKGRFSLDIIAGIPGQKSES 182

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            +  ++ A+    DHLS+YQLTIE+GT   +    G    P +   + L+          
Sbjct: 183 IDEIVETAVESGADHLSIYQLTIEEGTPLARKIAQGLRRAPQDEDYLRLFKHAVETAEKA 242

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+S  +  G ES HNL YW    Y+G+G GA S + +                L+
Sbjct: 243 GFKRYEVSAFARKGCESRHNLRYWYLRPYLGLGSGAVSTLPLADG-----------GALR 291

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                G  +  KE LS +Q+  E LM G RL  G++
Sbjct: 292 FCTGKGRYM--KEILSPKQRFTEALMTGFRLVAGVA 325


>gi|315022479|gb|EFT35506.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Riemerella anatipestifer
           RA-YM]
          Length = 350

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +S+ S++FGGGTPS++    I  ++D + + +T +S++EIT+EANP  +  +  +     
Sbjct: 25  KSLPSLYFGGGTPSILSVDEIQRLIDEVLRYFTFNSDIEITLEANPDDLNQSFLKALSNT 84

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            +NR+S+G QS  E+ L+ + R H+ASEA ++I  A++  F  +S DLIY  P    + W
Sbjct: 85  PINRLSIGTQSFFEEDLKLMNRAHSASEAESSIKRAQDTGFENISIDLIYGSPTSNHSLW 144

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  LQ+++   V H+S Y LT+E  T   K  +   +  P E      +        ++G
Sbjct: 145 KESLQKSIELQVPHISSYALTVEPKTALQKWIEQEKINAPKEEEQFIAFQYLSETLKSNG 204

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN S     S HN  YW+   Y+GIGP AHS    G  + + +I  +   ++K 
Sbjct: 205 FEHYEISNFSKPNYHSRHNTAYWKGLPYLGIGPSAHSY--DGQKQRSWNIANN-SLYIKS 261

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           + +N     E E LS ++Q +E +M+GLR + G+
Sbjct: 262 LVENS-LPKETEILSEKEQFNELIMIGLRTKWGV 294


>gi|295105851|emb|CBL03394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 369

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 167/323 (51%), Gaps = 18/323 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCV++C YCDF +        + + +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVRRCGYCDFATSAVPADAPEIDAYVEDLCLQIRRKAKEGELGALETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS I    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHIGLARLSMLLYTLSLSMHLTPEVECTMEANPESLTERMVRDAWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L  LGR H+A +A  AI  A   F  +S DL+  +P Q    +E  ++ A +  
Sbjct: 128 SFDDEVLAVLGRAHSADDARRAIEAAHTRFENVSVDLMCGIPGQGAESFEASVREAAALG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F      GD+  P ++V      +   + +  G   YE+++++ 
Sbjct: 188 AAHVSVYPLTIEAHTPFDAAVLAGDMEEPDDDVEAAHMEIAACVLAEAGYERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HN+ YW    Y+G+G            R A ++ ++ E  +++  ++G      
Sbjct: 248 PGFECRHNIAYWTGVPYLGLG------------RSAATMTQNAERRMRV--QDGRVT--- 290

Query: 319 EFLSSEQQADEFLMMGLRLREGI 341
           + + +   A E LM+G+R+  G+
Sbjct: 291 DDMDARGMAAEDLMLGMRMTCGV 313


>gi|224419197|ref|ZP_03657203.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|253828127|ref|ZP_04871012.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           BU550 [Helicobacter canadensis MIT 98-5491]
 gi|313142701|ref|ZP_07804894.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|253511533|gb|EES90192.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           BU550 [Helicobacter canadensis MIT 98-5491]
 gi|313131732|gb|EFR49349.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
          Length = 353

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 144/265 (54%), Gaps = 7/265 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + VY+H PFC  KC YC FNS   +  + +E ++Q+ + ++Q      G   ++S++ GG
Sbjct: 3   VAVYLHIPFCDSKCGYCAFNSKTNKNHL-KEQYMQTLVRDLQNKLLHFGVSKVTSLYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E +    I   +   +T   ++EI IEANP+S+ +   +  ++ GVNR+SLGVQ
Sbjct: 62  GTPSVVESRQYRSIFKILEPYFT--QDIEINIEANPNSLSLEWIRELKQMGVNRLSLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     LRFL RNH       AI  A  +    +S DLIY  P       + E+Q A   
Sbjct: 120 SFFVDKLRFLERNHRVDSVFEAIDNATKVGLENLSIDLIYGTPFCNQDLLKQEIQMASKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S YQL+I++G+ F+   K  +        A   + + + +  A G   YE+SN+S
Sbjct: 180 PINHISAYQLSIDEGSRFFTQKKQ-EFSGEFAGFASMGHFVREELRQA-GFLQYEVSNYS 237

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGA 282
             G +S HNL YW   DY+G+G G 
Sbjct: 238 -RGYQSKHNLAYWEQKDYLGVGAGG 261


>gi|325335439|gb|ADZ11713.1| Coproporphyrinogen III oxidase related Fe-S oxidoreductase
           [Riemerella anatipestifer RA-GD]
          Length = 348

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +S+ S++FGGGTPS++    I  ++D + + +T +S++EIT+EANP  +  +  +     
Sbjct: 23  KSLPSLYFGGGTPSILSVDEIQRLIDEVLRYFTFNSDIEITLEANPDDLNQSFLKALSNT 82

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            +NR+S+G QS  E+ L+ + R H+ASEA ++I  A++  F  +S DLIY  P    + W
Sbjct: 83  PINRLSIGTQSFFEEDLKLMNRAHSASEAESSIKRAQDTGFENISIDLIYGSPTSNHSLW 142

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  LQ+++   V H+S Y LT+E  T   K  +   +  P E      +        ++G
Sbjct: 143 KESLQKSIELQVPHISSYALTVEPKTALQKWIEQEKINAPKEEEQFIAFQYLSETLKSNG 202

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN S     S HN  YW+   Y+GIGP AHS    G  + + +I  +   ++K 
Sbjct: 203 FEHYEISNFSKPNYHSRHNTAYWKGLPYLGIGPSAHSY--DGQKQRSWNIANN-SLYIKS 259

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           + +N     E E LS ++Q +E +M+GLR + G+
Sbjct: 260 LVENS-LPKETEILSEKEQFNELIMIGLRTKWGV 292


>gi|210633852|ref|ZP_03297867.1| hypothetical protein COLSTE_01784 [Collinsella stercoris DSM 13279]
 gi|210159021|gb|EEA89992.1| hypothetical protein COLSTE_01784 [Collinsella stercoris DSM 13279]
          Length = 478

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 156/319 (48%), Gaps = 22/319 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISSIFF 76
           +Y+H PFC  KC YCDF+S         E+ I ++   +       G       + +++ 
Sbjct: 9   LYLHIPFCRAKCLYCDFDSRAL-TGCALEDAIGAYCEGLSAQVDAHGNAGELSEVETVYV 67

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + + L+     +       VE T EANP S  ++  Q  R AGV RISLG
Sbjct: 68  GGGTPSLLGDRLVGLV----DRVRAYCEPVEFTCEANPESFTLDLAQALRAAGVTRISLG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL    L+ +GR H+A +A+ AI  A+      S D++  LP QT+  +   L+  ++
Sbjct: 124 VQSLNASELKAIGRVHSAEQAMFAIAQAKAAGFSTSCDVMCGLPGQTLDTFAETLRSLVT 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+S+Y L +E GT   +M + G+  +P E+      +L   +    G   YE++++
Sbjct: 184 LNPDHVSVYPLQLEDGTPLARMEEAGETEVPDEDFQAQCMDLAAEVLKEAGYERYEVASY 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVA-----ISIEKHPESWLKMVR 309
           +  G    HN+ YW    Y+G+G  A S + V  G  R A       ++K   SW +   
Sbjct: 244 AKPGHRCRHNIAYWTGKSYLGLGRSAASMLDVCKGECREARFIACPDVQKGEASWTR--- 300

Query: 310 KNGHAVVEK-EFLSSEQQA 327
             G A+  K E LSS   A
Sbjct: 301 --GEALSPKEEDLSSRSDA 317


>gi|32266114|ref|NP_860146.1| coproporphyrinogen III oxidase [Helicobacter hepaticus ATCC 51449]
 gi|32262163|gb|AAP77212.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           hepaticus ATCC 51449]
          Length = 371

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 24/334 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRS-ISSIFF 76
           +YVH PFC  KC YC FNS V    V Q+NF   IQ+   +++       P S ISSIFF
Sbjct: 3   LYVHIPFCGSKCGYCAFNSFV----VEQDNFESYIQALCADIEHTLCHLYPHSHISSIFF 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+  ++   I   + KN  +S + EIT+EAN + +     +     G NR+S+G
Sbjct: 59  GGGTPNLLHSEHYEAIFTILYKNAFISKDCEITLEANVNYLNTQWCKDLVSLGANRLSVG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS ++  + FL R H+  E    I  A N  F  +S DLI   P  +      E+ +A 
Sbjct: 119 IQSFDKDKIAFLEREHSVYEIAKCIENAYNGGFKNISCDLIINTPLDSKALISSEITQAA 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV----DLYNLTQSITSAHGLHAY 251
           +  + H+S+Y L+I++G+ F+   K    +  S+ +      +L    +     +G + Y
Sbjct: 179 ALPLSHISVYTLSIDEGSRFFLESKKSKPIQNSKTIDSKTDEELSFWARECLKENGFYQY 238

Query: 252 EISNHSFL--GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           E+SN+      AE  HNL YW+  +Y+G G GA  R+     R   S+ ++       ++
Sbjct: 239 EVSNYVKFNTNAECKHNLGYWQGEEYLGCGAGAVGRIANKRTRAYPSLNEY-------IK 291

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              + +VE+  LS E    E +M+GLR  +G+ +
Sbjct: 292 NPYYRLVEE--LSEEDLRLEQIMLGLRCVKGVDM 323


>gi|213962677|ref|ZP_03390938.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sputigena Capno]
 gi|213954672|gb|EEB65993.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sputigena Capno]
          Length = 402

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 188/382 (49%), Gaps = 16/382 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF+      + G+   + +   E+   +       + +++ GGG
Sbjct: 22  SLYIHIPFCRRACHYCDFHFSTTLKRKGE--MVNALCKELILRKDEAINSELQTVYLGGG 79

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS-----SVEVNNFQGYRKAGVNRIS 134
           TPS++    +  +   I   + VS + EIT+EANP      S      +  R  G+NR+S
Sbjct: 80  TPSILSYDELQQLFHTIFTYYKVSPSAEITLEANPDDFFRDSSPQQMLEQLRSLGINRLS 139

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS  E+ L+ + R H+ ++    + +    F  ++ DLIY +P+ +  +W+  + +A
Sbjct: 140 LGVQSFFEEDLQLMNRVHSVAQVETLLQITPQYFDNITIDLIYGIPQMSKERWQENINKA 199

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS+ + H+S Y LT+E+ T  +K    G +   ++  A   + +        G   YE S
Sbjct: 200 LSFDIPHISAYALTVEEKTALHKFIATGKIPPINDEQAYTHFQILIDTLEKEGFIQYEFS 259

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N    G  S +N  YW    Y+GIGP AHS   K  S  +A +I+     +++ +++ G 
Sbjct: 260 NFGKEGYFSKNNTAYWFGKPYMGIGPSAHSFNGKERSWNIAHNIK-----YIQQIQQ-GI 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE--RV 371
              EKE L+   + +E ++  +R   GI +++  ++ G +      +  Q+    E   +
Sbjct: 314 LPQEKEELTLNNRYNELIITRIRTIVGIDLEEVRIVFGDDYRQYLLQQAQKYLADELLTI 373

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
           + + L+ T +G  + D + ++L
Sbjct: 374 EENHLKVTHKGKFLSDGIASDL 395


>gi|239917741|ref|YP_002957299.1| coproporphyrinogen III oxidase, anaerobic [Micrococcus luteus NCTC
           2665]
 gi|281413764|ref|ZP_06245506.1| coproporphyrinogen III oxidase, anaerobic [Micrococcus luteus NCTC
           2665]
 gi|239838948|gb|ACS30745.1| coproporphyrinogen III oxidase, anaerobic [Micrococcus luteus NCTC
           2665]
          Length = 426

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 163/343 (47%), Gaps = 21/343 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTG-----PR 69
           +  +YVH PFC  +C YCDFN++         G+ ++ +S +TE+ +   +        R
Sbjct: 35  TFSLYVHVPFCTVRCGYCDFNTYTAVDLGPGAGRGDYWESAVTELDFAADVLASSDVPAR 94

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTP+L+   ++  IL      + ++   E+T EANP ++     +     G
Sbjct: 95  PLHTVFFGGGTPTLLPAADLVRILQAAVDRFGIAPGAEVTTEANPDTITPEYARQLAAGG 154

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+SLG+QS     L  L R H      AA+  AR     +S DLIY    +++  W  
Sbjct: 155 FTRLSLGMQSAVPHVLATLERTHRPESVPAAVAAAREAGLEVSLDLIYGTAGESLADWRA 214

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ A+  A DH+S Y L +E+GT        G++     +   D Y L + +  A G  
Sbjct: 215 TLEAAVVLAPDHVSAYSLIVEEGTKLGAQVARGEVADVDPDDQADKYLLAEELLGAAGYR 274

Query: 250 AYEISN--HSFLGA---ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI--EKHPE 302
            YE+SN      G+    + HN+ YW   D+ GIGPGAH      SH   +     KHP 
Sbjct: 275 WYEVSNWARDPQGSGVHRARHNVAYWEDQDWWGIGPGAH------SHLAGVRFWNAKHPA 328

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           ++ + +       V +E   ++ +  E +M+ +R  +G+   +
Sbjct: 329 AYAQRLATGVTPAVGRERPDADARRLERIMLAVRTVDGLPTAE 371


>gi|260911686|ref|ZP_05918265.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634183|gb|EEX52294.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 343

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 157/286 (54%), Gaps = 14/286 (4%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGI------AKNWTVSSNVEITIEANPSSVEV 119
           T   +I +I+ GGGTPS +  +N+  + D I         + +S   E+T+E NP  +  
Sbjct: 13  TSSITIDTIYLGGGTPSQLSQENLLRLFDAIYNKVEQVPTFHISPTAEVTMECNPDDLTP 72

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              Q   +  VNR+S+GVQ+  ++ L FL R H A++   AI   R +    +S DLI+ 
Sbjct: 73  QFAQTIARLSVNRVSMGVQTFSDERLNFLRRRHKAADIEPAIQRLRQVGIGNISIDLIFG 132

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            PKQT+ +W  +LQ+A+   V+H+S Y L  E+GT  +++ +   +   +++ ++D++NL
Sbjct: 133 FPKQTVNEWATDLQKAIELDVEHISAYSLMYEEGTPLFRLLEQQRVSEIADSQSLDMFNL 192

Query: 239 -TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
              ++T+ H  H YEISN +  G  S HN +YW+   Y+G+GP AHS           ++
Sbjct: 193 LVDTLTTNHYEH-YEISNFAREGFRSRHNASYWQGIPYLGLGPSAHSYDGNSRQWNVSNL 251

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            K+ ++      +NG   +EKE L  + + ++++   LR +EG+ +
Sbjct: 252 RKYMDAI-----ENGMVPMEKETLDEDTKYNDWITTALRTKEGLDL 292


>gi|15639179|ref|NP_218625.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189025419|ref|YP_001933191.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           pallidum subsp. pallidum SS14]
 gi|3322450|gb|AAC65171.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017994|gb|ACD70612.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Treponema pallidum subsp. pallidum SS14]
          Length = 393

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 189/394 (47%), Gaps = 43/394 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +YVH PFC ++C YCDF S VR    R      +FI   L ++   R+  G +   +++ 
Sbjct: 9   LYVHIPFCAQRCAYCDFYSLVRSTYFRPHQPCPHFIDRLLQDVALQRECFGVQGWQTVYM 68

Query: 77  GGGTPSLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTPSL+ PQ+I      +  A+ + +    E T+E NP  V         + GVNR+S
Sbjct: 69  GGGTPSLLAPQDIRHFCVALRAAQRYPIQ---EFTLEVNPEDVTEEFLCACAEGGVNRLS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIF----PRMSFDLIYALPKQTMTQWE 188
           LGVQSL ++ LR   R  +A  A  A+ +  A   F     R+S DLI  L  QT     
Sbjct: 126 LGVQSLRDEVLRAERRAASAECARTALRVMTANARFFSGGVRISADLIAGLRGQTARMVR 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++   LS+ + H+SLY L +   T               E +A    + +  +  A G 
Sbjct: 186 EDIDELLSFGLRHVSLYGLCVPHPT-----------ETQEERIAALWAHGSAYLVRA-GF 233

Query: 249 HAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGA-------HSRVKVGSHRVAISIEKH 300
           + YE+SN +   A ES HN  YWR   + G+GPGA        S  K G+  +  ++ KH
Sbjct: 234 NRYELSNFARTAADESAHNRAYWRMAPHAGVGPGAVGTRFVNLSLSKEGAWAIRSTVRKH 293

Query: 301 PESWL-KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
              +L ++ R+N   V E EFL+      E L+MGLRL +G+ V  +    G+ ++    
Sbjct: 294 LGQYLAEVCREN---VYEHEFLTEHMCVQEALLMGLRLEQGLDVVTFRARFGKGIEAYIG 350

Query: 360 RNLQR---QGFIERVQFSRLRCTQRGMTMLDSVI 390
           + + R    G ++R   S LR + +    LDS +
Sbjct: 351 KTIARWQCHGRMQRTATS-LRLSAQARVFLDSFL 383


>gi|291059593|gb|ADD72328.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema pallidum subsp. pallidum str. Chicago]
          Length = 405

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 189/394 (47%), Gaps = 43/394 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +YVH PFC ++C YCDF S VR    R      +FI   L ++   R+  G +   +++ 
Sbjct: 21  LYVHIPFCAQRCAYCDFYSLVRSTYFRPHQPCPHFIDRLLQDVALQRECFGVQGWQTVYM 80

Query: 77  GGGTPSLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTPSL+ PQ+I      +  A+ + +    E T+E NP  V         + GVNR+S
Sbjct: 81  GGGTPSLLAPQDIRHFCVALRAAQRYPIQ---EFTLEVNPEDVTEEFLCACAEGGVNRLS 137

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIF----PRMSFDLIYALPKQTMTQWE 188
           LGVQSL ++ LR   R  +A  A  A+ +  A   F     R+S DLI  L  QT     
Sbjct: 138 LGVQSLRDEVLRAERRAASAECARTALRVMTANARFFSGGVRISADLIAGLRGQTARMVR 197

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++   LS+ + H+SLY L +   T               E +A    + +  +  A G 
Sbjct: 198 EDIDELLSFGLRHVSLYGLCVPHPT-----------ETQEERIAALWAHGSAYLVRA-GF 245

Query: 249 HAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGA-------HSRVKVGSHRVAISIEKH 300
           + YE+SN +   A ES HN  YWR   + G+GPGA        S  K G+  +  ++ KH
Sbjct: 246 NRYELSNFARTAADESAHNRAYWRMAPHAGVGPGAVGTRFVNLSLSKEGAWAIRSTVRKH 305

Query: 301 PESWL-KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
              +L ++ R+N   V E EFL+      E L+MGLRL +G+ V  +    G+ ++    
Sbjct: 306 LGQYLAEVCREN---VYEHEFLTEHMCVQEALLMGLRLEQGLDVVTFRARFGKGIEAYIG 362

Query: 360 RNLQR---QGFIERVQFSRLRCTQRGMTMLDSVI 390
           + + R    G ++R   S LR + +    LDS +
Sbjct: 363 KTIARWQCHGRMQRTATS-LRLSAQARVFLDSFL 395


>gi|169350126|ref|ZP_02867064.1| hypothetical protein CLOSPI_00868 [Clostridium spiroforme DSM 1552]
 gi|169293339|gb|EDS75472.1| hypothetical protein CLOSPI_00868 [Clostridium spiroforme DSM 1552]
          Length = 363

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 190/379 (50%), Gaps = 26/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+  C YCDF   V   K   +++++    E+  +  L  P  + +I+ GGG
Sbjct: 5   SLYIHIPFCLHICAYCDF-CKVFYNKELVDDYLEVLKRELNDL-NLNIP--LKTIYIGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  ++D I     ++++ E+TIE NP +++       +K GV R+S+GV++
Sbjct: 61  TPTSLNDEQLKSLMDMIRP--YINNDCEVTIETNPETLDYYKLDILKKGGVTRLSIGVET 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ + R H +      I   + + F  +S DL+Y LP QT+   + +L    S  
Sbjct: 119 FNDNILKKINRKHTSDMVKRIIRYGQQLEFDNISIDLMYGLPDQTLQDIKNDLNIIESLN 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T+     K+ +     E+    +  +      + G   YEISN+S 
Sbjct: 179 IQHVSYYSLILEDHTVL----KNQNYQSLDEDSEALINQIIDEKLESLGFMKYEISNYSK 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ESLHNL YW+Y +Y GIG GA S++        I   ++  ++L     N      K
Sbjct: 235 KGFESLHNLTYWQYDNYYGIGLGASSKID----NCIIEHSRNLNAYL-----NYRDTTSK 285

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIERVQFS 374
              S E+     LMM LRL +G+ +K+++    +++     +  +++L+ +  +  ++  
Sbjct: 286 IECSKEEIMFNHLMMSLRLVKGLDLKEFKERYNKDIYDVYQVALDKHLKLKTLV--IEDG 343

Query: 375 RLRCTQRGMTMLDSVIANL 393
            LRC +  + +L+ ++ + 
Sbjct: 344 YLRCNKESIKLLNMILLDF 362


>gi|308184971|ref|YP_003929104.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
 gi|308060891|gb|ADO02787.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
          Length = 345

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 160/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESIHQHARLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPMIETILKSGIENISIDLIYNTPLDNEISLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS   +VD  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---SVDFDNVVREALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 GYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|160915155|ref|ZP_02077368.1| hypothetical protein EUBDOL_01163 [Eubacterium dolichum DSM 3991]
 gi|158432954|gb|EDP11243.1| hypothetical protein EUBDOL_01163 [Eubacterium dolichum DSM 3991]
          Length = 363

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 194/380 (51%), Gaps = 30/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR-RYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           VYVH PFC   C YCDF   VR  Y  G  + ++Q+   E+   ++      I++++ GG
Sbjct: 4   VYVHVPFCKTICSYCDF---VRCGYHQGLADKWLQAIQKEI---KEKLRNEKITTLYLGG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +    + ++L+ + +    S++VE  T+EAN  S++ +  +     GVNRISLGV
Sbjct: 58  GTPTSLTIAQMEVLLECLGE---YSADVEEYTVEANVESLDDSMLELLAGYGVNRISLGV 114

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS++   ++ + R+H+    I  I  +  +    +S DLIY LP QT   W+ +L+    
Sbjct: 115 QSIDATLIKRMNRHHDKQMVIDTIQRIHHHGIHNISCDLIYGLPAQTPALWQEDLRVLCE 174

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+SLY LTIE+ + F +      +    E+   D Y    +   + G   YEISN 
Sbjct: 175 QDIQHISLYALTIEEHSAFGR----EKVAAMEEDEEADFYEAAITYLQSQGFEQYEISNF 230

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S HN  YW Y D+IGIG GA  + K   +       ++ E++L+      +   
Sbjct: 231 ARHKHYSKHNQAYWHYEDFIGIGCGASGKQKHARYDNT----RNLETYLRQGPSPSYIA- 285

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQF 373
               L+S+ +  E +MMGLRL +GIS+  +    G  L + C  N  ++     + R++ 
Sbjct: 286 ----LTSKDERFEMIMMGLRLTQGISLSKFSKRFGCEL-LSCYENAVQKNIKLDLLRMEN 340

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             ++ T +G+ +L+SV+ + 
Sbjct: 341 GFIKATDKGLHVLNSVLLDF 360


>gi|149277120|ref|ZP_01883262.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Pedobacter sp. BAL39]
 gi|149231997|gb|EDM37374.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Pedobacter sp. BAL39]
          Length = 355

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 3/215 (1%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SI+FGGGTPS++    +A I D + +++++SS+ EITIEANP  +     +  ++  V
Sbjct: 26  IGSIYFGGGTPSVLPDHALAKIFDTLTRHYSISSDAEITIEANPDDLNAQKIRALKQLPV 85

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR S+G+QS  E+ LR++ R HN  EA   I  +++  F  ++ DLIY  P  T  +W  
Sbjct: 86  NRFSIGIQSFFEEDLRWMNRAHNVQEAEECIKRSQDAGFENLTIDLIYGYPLLTDQKWLS 145

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGL 248
            + +A+ +   H+S Y LT+E  T      K G     ++  + D +  L   ++SA G 
Sbjct: 146 NINKAIEFQTPHISAYSLTVEPRTALASAIKRGKQTPVNDEQSADQFLTLIDKLSSA-GF 204

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
             YEISN S  G  ++HN NYWR   YIGIGP AH
Sbjct: 205 QHYEISNFSQPGKYAVHNTNYWRGVSYIGIGPSAH 239


>gi|34558032|ref|NP_907847.1| coproporphyrinogen III oxidase [Wolinella succinogenes DSM 1740]
 gi|34483750|emb|CAE10747.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE (HEMN) [Wolinella
           succinogenes]
          Length = 346

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 162/323 (50%), Gaps = 21/323 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC  KC YC F+S           ++Q+ L  ++          I S++FGGGT
Sbjct: 3   LYFHIPFCASKCGYCAFDSRSAP-SSWHAPYMQALLVALKSELAKLKEERIESVYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+L++      + +  +    +S   EITIEANP S+  +  +     GVNR+SLGVQS 
Sbjct: 62  PTLLDSHLFEPLFERFSP--YLSKEAEITIEANPRSLTPSWAERMHSFGVNRVSLGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           E + L +L R+H   E   A+  L +     +S DLIY  P  + T    E+QRA +  +
Sbjct: 120 ERKKLAWLERDHGEGEIERAMESLLKARIKHISIDLIYDTPLDSPTLLSKEIQRASTLPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLS Y LT+E+G+ F+   + G   +  E+ A    +L +      G   YE+SN++  
Sbjct: 180 DHLSAYSLTLEEGSRFFAKGQKG---MEGESYA----SLVRERLGEDGFVQYEVSNYA-R 231

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HNL YW   DYIG+G GA   +    +  A  IE++ +  L           E+E
Sbjct: 232 GYRSSHNLGYWMAKDYIGVGAGAVGCLGGVRYYPAKEIERYIKEPLWR---------EEE 282

Query: 320 FLSSEQQADEFLMMGLRLREGIS 342
            LS E +  E L +GLR   GI+
Sbjct: 283 PLSHEDKRLERLFLGLRSEVGIA 305


>gi|269215619|ref|ZP_06159473.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           exigua ATCC 700122]
 gi|269131106|gb|EEZ62181.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           exigua ATCC 700122]
          Length = 371

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 182/343 (53%), Gaps = 25/343 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +Y+H PFC  +C YCDF +        +VG+  +I+  + +++   +     SI +++ 
Sbjct: 9   ALYIHIPFCAHRCAYCDFATSAVPGDAAEVGE--YIERLILDIRRASKAGDLASIETVYI 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  ++++ +L  +  +  +++ VE ++EANP S+     +     GVNR+S+G
Sbjct: 67  GGGTPSHVGSKHLSNLLYTLGVSMNLTTEVECSMEANPESLTPELVRDIYALGVNRLSIG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS ++  LR + R H+   A AA+ +AR  F  +S DL+  +P QT   +  ++  A+ 
Sbjct: 127 VQSFDDGILRTVDRVHDGQAARAAVAMARERFDNVSIDLMCGIPGQTPDMFLSDVSEAVR 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H+S+Y L+IE+GT F ++ ++G +   +++    +  +  ++    G H YE++++
Sbjct: 187 LGVAHVSVYPLSIEEGTPFDRLVEEGRMRDANQDEEALMMGMAPNVLEPEGFHRYEVASY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HN  YW    Y+G+G  A +  +  SHR               VR    AVV
Sbjct: 247 ARDGFECRHNKAYWTGVPYLGLGVSAVTMDQDASHR---------------VRVQDGAVV 291

Query: 317 EKEFLSSEQQADEFLMMGLRLREGIS---VKDWEMLAGRNLDI 356
           ++  L   Q   E LMM +R+ +G+S   ++   +L  R L++
Sbjct: 292 DE--LDRRQMVVEDLMMRMRMAQGVSEEELRAAALLVPRALEV 332


>gi|315587116|gb|ADU41497.1| possible coproporphyrinogen dehydrogenase [Helicobacter pylori 35A]
          Length = 350

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 157/323 (48%), Gaps = 20/323 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T   SI S+F GGGT
Sbjct: 8   LYIHIPFCENKCGYCAFNSYEDKHGLKEE-YTQALCLDLKHALSQTD-ESIESVFIGGGT 65

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 66  PNTLSVESFERIFESIYHNASLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 125

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 126 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 185

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K  K      PS        N+ + +        YE+SN++   
Sbjct: 186 HLSAYALSIEKNTNLEKNAKK-----PS---CTHFDNIIKEVLEGFSFKQYEVSNYA-RN 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 237 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 287

Query: 321 LSSEQQADEFLMMGLRLREGISV 343
           LS + +  E L +GLR   G+ +
Sbjct: 288 LSEQDKHLEKLFLGLRCVLGVEI 310


>gi|317014612|gb|ADU82048.1| coproporphyrinogen III oxidase [Helicobacter pylori Gambia94/24]
          Length = 345

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESIHQHASLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS   +VD  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---SVDFDNVVREALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 282 TLNKQDKRLERLFLGLRCELGVEL 305


>gi|308064005|gb|ADO05892.1| coproporphyrinogen III oxidase [Helicobacter pylori Sat464]
          Length = 345

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYRNARLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N  + I        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNAIKEILEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEI 305


>gi|225875026|ref|YP_002756485.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidobacterium capsulatum ATCC 51196]
 gi|225791861|gb|ACO31951.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidobacterium capsulatum ATCC 51196]
          Length = 392

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 19/338 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSIS 72
           LG+Y+  PFC  KC +C+F S V       + ++   + +M   R          P+++ 
Sbjct: 2   LGLYLSIPFCRSKCTFCNFASGVFPASY-FDRYVARLVEDMAAARARAAEWGAALPQTVD 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+FGGGTPSL+ P+ +  ++  I   ++V +  EIT EA P+ +         + G NR
Sbjct: 61  TIYFGGGTPSLLPPELVRRLMAAIRDEFSVLAGAEITFEAAPAQLADETLAAMVETGANR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S GVQS  +   +  GR H  ++    +  AR      +S DL+  LP QT   W   L
Sbjct: 121 LSFGVQSFVDAEAQATGRLHGRADVFRDVERARAAGIEDVSLDLLAGLPGQTRATWRESL 180

Query: 192 QRALSYAVDHLSLYQLTIEKGT-----LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  V H S+Y L ++  +     +     + G  ++P+E+  V +Y       +  
Sbjct: 181 DCLAETGVGHASVYMLEVDDASKLGAEMLAGGVRYGAGLVPNEDAIVAMYEEAVERLAGA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWL 305
           GL  YEISN +  G ES HN  YW    Y+G+G  AHS ++  G   +  +       +L
Sbjct: 241 GLAQYEISNFARAGRESRHNRRYWERRPYLGLGVDAHSMLREAGGRALRFATTDELPPYL 300

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +     G      E LS  Q+ +E   +GLR+ EG+S+
Sbjct: 301 E-----GAGWARPEPLSRAQELEEAWFLGLRMNEGVSL 333


>gi|297380405|gb|ADI35292.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori v225d]
          Length = 345

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYRNANLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N  + I        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNAIKEILEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEI 305


>gi|188528013|ref|YP_001910700.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
 gi|188144253|gb|ACD48670.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
          Length = 345

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 159/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYRNACLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N+ + +        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNIIKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|313673474|ref|YP_004051585.1| oxygen-independent coproporphyrinogen iii oxidase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940230|gb|ADR19422.1| oxygen-independent coproporphyrinogen III oxidase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 365

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 186/375 (49%), Gaps = 29/375 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YC F S +   +  +  +I + L E++  + L    SI +I+ GGG
Sbjct: 5   GLYLHIPFCKSKCKYCGFYSTLHNEET-EYAYINAILREIKTYKGL----SIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ QN+ ++L+ + +N+ V +  E T+E NP SV  +  +  +  GV+RISLG+QS
Sbjct: 60  TPSTLKLQNMKVLLEALYENF-VPNIKEFTVEINPESVTEDMLKLLKDYGVDRISLGIQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L +  L  LGR H++  A  AI L  N    ++ D+IY +P          L+    Y +
Sbjct: 119 LFDNVLCLLGRVHSSFRARRAIELILNYGLELNCDIIYDIPTVNHDFTLKTLEILTDYPI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y  + +  T F   +KD D        A   +N       + G   YEISN +  
Sbjct: 179 KHISAYNYSFD--TDFLSEYKDTD--------AETFFNDVVDFLYSRGFFQYEISNFARN 228

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HN  YW+  DYIG G  AHS +   + R+    +   E ++K        ++EK 
Sbjct: 229 GKGSKHNTKYWKMQDYIGFGISAHSMMNGENARMRWCNKGTVEEYIK-----EQYIIEKY 283

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF-----S 374
            +   +   E ++ G+R+ +G++++  +   G  +    E  +++  F++   F      
Sbjct: 284 EVPIAECFIEDVVFGIRMVDGVNIESLKSKYGGEV---VEEFMKKIVFLKDENFICYERG 340

Query: 375 RLRCTQRGMTMLDSV 389
            L  T++G   LDSV
Sbjct: 341 CLCLTRKGQLYLDSV 355


>gi|217034071|ref|ZP_03439492.1| hypothetical protein HP9810_893g18 [Helicobacter pylori 98-10]
 gi|216943466|gb|EEC22920.1| hypothetical protein HP9810_893g18 [Helicobacter pylori 98-10]
          Length = 345

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYEDKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYRNARLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVVETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS        N+ + +        YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---CTHFDNMIKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCALGVEL 305


>gi|313115247|ref|ZP_07800727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622440|gb|EFQ05915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 326

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 165/330 (50%), Gaps = 24/330 (7%)

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P    +++FGGGTPSL+ P+    ++D            EIT+EANP +V   +  G+R+
Sbjct: 16  PLQPDTLYFGGGTPSLLRPEQAKRLIDAARP----MPGAEITLEANPETVTEESLAGFRE 71

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AGVNRIS GVQS  +  LR LGR H A +A AA   A+   F  +S D++ ALP  T  +
Sbjct: 72  AGVNRISFGVQSARDTQLRTLGRPHTAKQARAAFAAAQRAGFTNISGDIMLALPHYTEAE 131

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L+        H+S Y L IE  + F K   +G   LP+ + A D Y         H
Sbjct: 132 FDETLELIEGGGATHISAYLLKIEPDSAFGKHPPEG---LPTGDEAADFYLYAVEQLEHH 188

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G E  HNL YW  GDY+G+GP AHS   +G  R       +P     
Sbjct: 189 GYKQYEISNFAKPGYEGRHNLIYWDCGDYLGLGPAAHS--CMGGRRF-----YYPPDTAA 241

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQ 363
            +      V++         A+++L++ LRLR+G+S+  ++ + G+      +   +N  
Sbjct: 242 FLNDAAAPVMD-----GSCGAEDYLILQLRLRKGLSLDAYKKIYGKEFSTAQLAFVQNCV 296

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           R G+        L  T  G+ + +S++A L
Sbjct: 297 RAGYAS-FDGRTLALTPAGLIVQNSILAQL 325


>gi|308183331|ref|YP_003927458.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
 gi|308065516|gb|ADO07408.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
          Length = 345

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEKYTQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYHNARLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P    T  + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNETSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N  + +        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNAIKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKFIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|320536527|ref|ZP_08036554.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema phagedenis F0421]
 gi|320146627|gb|EFW38216.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema phagedenis F0421]
          Length = 386

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 176/364 (48%), Gaps = 48/364 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNS--HVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIF 75
            +Y+H PFC+++C YCDF S  H   +   +    FI   L + +  ++        +++
Sbjct: 3   ALYIHIPFCIQRCTYCDFFSLAHFNAFIPYKPFPAFIARLLEDAELEKKRFSATGWDTVY 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ+IA +   I+++       E TIEANP  +         + G+NRIS+
Sbjct: 63  IGGGTPSLLAPQDIAALGKHISESQQFPIK-EFTIEANPEDITDAFLAACAEGGINRISV 121

Query: 136 GVQSLEEQSL---RFLGRNHNASEAIAAIHLARNIFPR---MSFDLIYALPKQTMTQWEM 189
           G+QSLE+Q L   R  G      EA+  I+ + +IFP+   +S D I  L  QT      
Sbjct: 122 GIQSLEQQVLSAERRRGSPEKTQEALRKINNSFSIFPKGLSLSCDFIAGLQAQTQAMLLR 181

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ  L++   H+SLY L   +      + ++ +     E +A  LY   ++    +G  
Sbjct: 182 DLQAVLAFNPKHISLYGLCTAR-----PLSEERE-----EKIASMLY-AGKAFLEKNGFF 230

Query: 250 AYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI--SIEKHPESWLK 306
            YEISN +   A ESLHN  YW+  +Y GIGPGA   +        I    +K+ + WL 
Sbjct: 231 HYEISNFAKNAASESLHNKTYWKMENYAGIGPGASGTLINSDKPSGIRSCAKKNIKLWLS 290

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
               N   V + E L  ++  +E L+MGLRL EGI                     +RQG
Sbjct: 291 --ENNRSNVYDYEILGEKELIEEVLLMGLRLTEGI---------------------ERQG 327

Query: 367 FIER 370
           FI++
Sbjct: 328 FIKK 331


>gi|325998084|gb|ADZ50292.1| putative coproporphyrinogen III oxidase [Helicobacter pylori 2017]
          Length = 345

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 161/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YIQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESINQHASLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY       T  + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTSLDNETSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS   +VD  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---SVDFDNVVREALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 282 TLNKQDKRLERLFLGLRCVLGVEL 305


>gi|150020836|ref|YP_001306190.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho melanesiensis BI429]
 gi|149793357|gb|ABR30805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho melanesiensis BI429]
          Length = 375

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 183/385 (47%), Gaps = 35/385 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           KYLS    N+     N + +Y+H PFC KKC YCDF S+        EN+I++ +TE++ 
Sbjct: 3   KYLSDLIGNL-----NKISLYIHIPFCKKKCYYCDFVSYTEG---SVENYIEALITELKL 54

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +    + I +++ GGGTPS I    I  ++  + K   +    E TIE NP S +   
Sbjct: 55  YEKYL-EKGIKTLYIGGGTPSYINEHYIEKLVMFLNKYLQLE---EFTIEVNPDSFDSEK 110

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
              Y+  G NRISLG+QSL++  L+  GR HN+ +A  A  +A+ IF  ++ D I  LP 
Sbjct: 111 AYFYKSLGTNRISLGIQSLDDTVLKRAGRTHNSYQAYKAYEIAKGIFNNINVDFIIGLPG 170

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++    E  +         H+S+Y L I +GT   K+ K     +P E  + + ++    
Sbjct: 171 ESWKSIEKIVDFIRLEHPKHISVYLLEIHEGTFLSKIMKK----IPDE--SFERHDALLD 224

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
                G   YEISN +     S HNL YW   +YIG+G  A        +    ++    
Sbjct: 225 FLKTEGYERYEISNFALNENYSKHNLVYWANREYIGVGLSAGGHFDNFRYN---NVSDFK 281

Query: 302 ESWLKMVRKNG---HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
             +LK+  KNG   +    K   + E++  E + M LR + GI  K    L   N +IE 
Sbjct: 282 SYFLKL--KNGKFPYGYQSKN--TKEKEILETIFMMLRTKWGIDKK----LVHINFEIEN 333

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGM 383
             N  ++ F     F   R +++GM
Sbjct: 334 ILNTLKRKF---TFFDGTRLSEKGM 355


>gi|330752380|emb|CBL87332.1| oxygen-independent coproporphyrinogen III oxidase [uncultured
           Sphingobacteria bacterium]
 gi|330752506|emb|CBL87454.1| oxygen-independent coproporphyrinogen III oxidase [uncultured
           Sphingobacteria bacterium]
          Length = 375

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 164/333 (49%), Gaps = 26/333 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTG-PRSISSIF 75
           GVY+H PFC + C YC+F      +  GQ +   FI + + E++   +  G  R I SI+
Sbjct: 9   GVYIHVPFCQQACSYCNF-----YFVTGQRDHTDFITAAIREIKESSEFFGEDRIIHSIY 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +  + +  IL+ +   +TVS++ EIT+EANP  +  +    +   GVNRISL
Sbjct: 64  FGGGTPSRLTLKELESILNQVHSIFTVSTDAEITLEANPEDITKDIVNAWFNLGVNRISL 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  ++ L  + R H+  EA+ AA  + ++ F   SFDLI     Q +     +L+  
Sbjct: 124 GIQSFNDKLLALMRRAHDGKEALHAASIIKQSSFRNFSFDLIIGQIHQDLEMLNQDLRYL 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            S+   HLS Y LT+E+ T  +K  +   L   ++    + Y              YE S
Sbjct: 184 ESFKPPHLSTYLLTVEEKTHLHKEIQRKRLPDVADRTQEEHYLHLMKWAQEWKYTHYETS 243

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW----LKMVRK 310
           + +  G  + HN NYW +  Y+GIGP AH            S +     W    L     
Sbjct: 244 SFTLDGYHARHNANYWNHSPYLGIGPSAH------------SFDGKKRYWNSRNLNEYIA 291

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +  A  ++E LS     +E +M+GLR  +GI +
Sbjct: 292 SATASRKEECLSRIDFINEKIMLGLRQSKGIVI 324


>gi|317177968|dbj|BAJ55757.1| coproporphyrinogen III oxidase [Helicobacter pylori F16]
          Length = 345

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E ++Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YVQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  N ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYHNASLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS        N  + I        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTHFDNAIKEILEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCTLGVEL 305


>gi|307637899|gb|ADN80349.1| Putative coproporphyrinogen III oxidase of BS HemN-type
           [Helicobacter pylori 908]
 gi|325996496|gb|ADZ51901.1| Putative coproporphyrinogen III oxidase [Helicobacter pylori 2018]
          Length = 345

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 161/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YIQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESIHQHASLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY       T  + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTSLDNETSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS   +VD  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---SVDFDNVVREALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 282 TLNKQDKRLERLFLGLRCVLGVEL 305


>gi|225175081|ref|ZP_03729077.1| oxygen-independent coproporphyrinogen III oxidase [Dethiobacter
           alkaliphilus AHT 1]
 gi|225169257|gb|EEG78055.1| oxygen-independent coproporphyrinogen III oxidase [Dethiobacter
           alkaliphilus AHT 1]
          Length = 337

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 152/282 (53%), Gaps = 5/282 (1%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G   + +++ GGGTP+++E   +  +L    ++  ++ + E T+EANP ++     +  
Sbjct: 10  AGGHVVETLYIGGGTPTVLEEAQLEYLLLACRRHLPLN-DAEWTVEANPGTITAQKAKLL 68

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              GVNRISLG+Q + +  L  LGR H A++A  A  L R  FP +S D++  LPKQ+  
Sbjct: 69  ASYGVNRISLGIQDINDCRLALLGRTHTAAQARQAFFLCREHFPTVSVDIMTGLPKQSAE 128

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             E  +     +  DH+SLY L +E+GT    + + G + LP+E   + +    +    +
Sbjct: 129 DVEEAVSEVCRWQPDHISLYGLKVEEGTELASLVEKGKVELPAEEDVLSMMLAGKDRLLS 188

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           HG   YEI+N +  G    HNL YW+   Y+G+G GAHS  +    R   ++  H + + 
Sbjct: 189 HGYEHYEIANFARPGKVCRHNLTYWQNRPYLGLGLGAHSFWQ--DKRFHNTV--HWQGYR 244

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           + + +N   + E+ F++  Q  ++ +M+GLRL +G+   +++
Sbjct: 245 QGLEQNSLPLQEETFVTRRQMMEDTMMLGLRLMQGVYFAEFQ 286


>gi|260654645|ref|ZP_05860135.1| putative coproporphyrinogen dehydrogenase [Jonquetella anthropi
           E3_33 E1]
 gi|260630661|gb|EEX48855.1| putative coproporphyrinogen dehydrogenase [Jonquetella anthropi
           E3_33 E1]
          Length = 381

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 182/387 (47%), Gaps = 24/387 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--- 69
           G GS   G+Y+H PFC  KCPYC F S     +      +  +LT ++    +   R   
Sbjct: 10  GTGSGPCGLYLHVPFCRGKCPYCSFYSRPLTARA-----LDEYLTGVERELGILASRYSG 64

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + +++ GGGTPS + P +    L    +     S+ E T EANP S+       ++  G
Sbjct: 65  KLQTVYIGGGTPSAL-PIDAWRRLFAALEWLKRESSAEFTAEANPESLTDELIGLWQDHG 123

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+SLGVQSL+++ L  L R+H+A +A+        +  R+S D+++ LP QT+  +  
Sbjct: 124 VNRVSLGVQSLDDRILSGLSRHHSAVQALERTAQCVRLGFRVSCDVMFGLPGQTLRNFAE 183

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++R +S  V HLSLYQL+IE G+ ++  H+  +L           Y   Q      G  
Sbjct: 184 TVKRLVSTGVRHLSLYQLSIEPGS-YWWAHRPKEL-----GGGYASYRWAQWYLPRQGFR 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEI++ +  G ES HN  YW   + +  GP A    + G        E     W   + 
Sbjct: 238 QYEIASFAGPGEESRHNQLYWTRANVLPAGPSAWGYWE-GCRTCG---EPTVGRWAADLA 293

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQG 366
                +   E L   + A E +++G R+ +GI +  WE   GR    E ER L       
Sbjct: 294 AGRLPLAGWEELKGGRAASEAVILGTRMAQGIDLASWESQFGRRARGELERRLSLLPPDC 353

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
           F   V+  RL  T +GM + +++ + L
Sbjct: 354 FA--VRAGRLSLTPKGMRLGNALWSEL 378


>gi|229815225|ref|ZP_04445561.1| hypothetical protein COLINT_02271 [Collinsella intestinalis DSM
           13280]
 gi|229809235|gb|EEP45001.1| hypothetical protein COLINT_02271 [Collinsella intestinalis DSM
           13280]
          Length = 424

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 162/341 (47%), Gaps = 23/341 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC  KC YCDF+S            + +  +  +++           + +++ G
Sbjct: 32  LYLHIPFCKAKCLYCDFDSRALGGCELDAAMDRYCIALTSQIDTYGAAGELDEVETVYIG 91

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+   + ++L+     +        E T EANP S  +   Q  R+AGV RISLGV
Sbjct: 92  GGTPSIFGARLVSLV----ERVRGYCDPTEFTCEANPESFTLELAQALREAGVTRISLGV 147

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L+   L+ +GR H+A +A+ AI  A+ I    S D++  LP QT+  +   L+  ++ 
Sbjct: 148 QTLDAGELKAIGRIHSAEQAMLAIAQAKAIGFSTSCDVMCGLPGQTLESFGRTLETLMTL 207

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DH+S+Y L +E+GT   ++ + G + +P E+      +L     +  G   YE+++++
Sbjct: 208 RPDHISVYPLQLEEGTPLARLEEQGRIAVPDEDFQAACMDLAAGKLAGAGFERYEVASYA 267

Query: 258 FLGAESLHNLNYWRYGDYIGIG---------PGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             G    HN+ YW    Y+G+G         P       +G++    S   +P S  +  
Sbjct: 268 QPGQRCRHNIAYWTGKPYLGLGRSAAGMFDIPVTSEMCNLGTYPFYTS-GANPSSAPQEG 326

Query: 309 R------KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           R       N     + E L+  +   E LM+  R+ +GI +
Sbjct: 327 RVRYRQLDNEGTQFDTEHLTPREAMAEDLMLACRMTDGIPL 367


>gi|227538889|ref|ZP_03968938.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241398|gb|EEI91413.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 347

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 173/340 (50%), Gaps = 10/340 (2%)

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E++   Q    + ++S++FGGGTPS+++  +I   +D +++ + ++ + EIT+EANP  +
Sbjct: 8   ELELRSQSGDTKKLTSLYFGGGTPSILDAGHIQSFIDAVSEYYDIAEDAEITLEANPDDL 67

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +    Q  R   +NR S+G+QS  E+ L ++ R HNASEA AAI   ++  F  ++ DLI
Sbjct: 68  DHKKVQQLRHTDINRFSIGIQSFYEEDLSWMNRAHNASEADAAIKRVQDAGFENITADLI 127

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P  T  +W   + + L + + H+S Y +T+E  T      K G     +E+ +   +
Sbjct: 128 YGYPLLTDQKWNANIDKLLEFEIPHISAYSMTVEPQTALDHFIKKGKSPAMNESQSAAQF 187

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
            +        G   YEISN +     + HN +YW+   YIGIGP AHS    G +R + +
Sbjct: 188 EILIDKLVNSGFEHYEISNFAKPDRYARHNSSYWKGDTYIGIGPSAHSF--NGDNR-SWN 244

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           I  +   ++K + +    V E E LS E + +E++M  LR   G+     E   G +   
Sbjct: 245 IANNA-LYIKGISEKT-PVAEVEQLSFENKVNEYIMTSLRTMWGMDTAKIEEAFGSDTLK 302

Query: 357 ECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +    +Q    QG + R+Q      T +G  + D + + L
Sbjct: 303 QLTNTIQPFIAQGEV-RLQDGHYYLTAKGKLIADHIASEL 341


>gi|257784602|ref|YP_003179819.1| oxygen-independent coproporphyrinogen III oxidase [Atopobium
           parvulum DSM 20469]
 gi|257473109|gb|ACV51228.1| oxygen-independent coproporphyrinogen III oxidase [Atopobium
           parvulum DSM 20469]
          Length = 415

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 137/266 (51%), Gaps = 5/266 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFC +KC YCDF+S   R+     + ++ +   ++    QL    +  +++ GG
Sbjct: 15  ALYLHIPFCSQKCFYCDFSSWSTRQDDSRMKKYVNALKHQLDEAAQLGILATTKTVYMGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++   +    D      +++  +E ++EANP S+           GV RISLGVQ
Sbjct: 75  GTPSLLDQGAV----DLAHHTSSITHPIEFSMEANPDSLSDELLASLSAGGVTRISLGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  +  L+ LGR H+A  A   +  A+     +S DL+ A+P+QT + WE  L R +S  
Sbjct: 131 SFNDNELKELGRIHSADLAYDRVLAAKESGYEVSVDLMCAIPEQTESSWEYTLSRFISLG 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S+Y LTIE GT   K  +D D+     +V  D       +  A G   YE+++++ 
Sbjct: 191 VNHVSVYPLTIEDGTALAKQTQDKDIPWNVYDVQADRMQTASKMLQAAGFERYEVASYAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS 284
                 HN  YW    Y+G+G  A S
Sbjct: 251 NQKSCKHNKMYWTGESYLGLGTSAAS 276


>gi|154249903|ref|YP_001410728.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fervidobacterium nodosum Rt17-B1]
 gi|154153839|gb|ABS61071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fervidobacterium nodosum Rt17-B1]
          Length = 370

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 176/377 (46%), Gaps = 42/377 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH PFC K+C YCDF S+V       + + +  L E+   ++      I +++ GG
Sbjct: 9   LGLYVHIPFCKKRCIYCDFVSYVEN---NFDEYTEYLLNEIDLYKEYLN-SGIDTLYIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+   +NI+ I + +     +S+N EITIE NP S    N Q Y+K GVNRIS+G+Q
Sbjct: 65  GTPSIFPIKNISKIFEKLEP--YISNNAEITIEVNPESFTKENAQFYKKIGVNRISMGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+  GR ++    I    +A+  F  ++ D I  LP ++ +     +Q    + 
Sbjct: 123 SADDVVLKKSGRLYDFETFIRKFDIAKRYFDNINVDFIIGLPGESWSTIGKNVQFISDFL 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L +          K+  ++   ++     Y+   +  S  G   YEISN + 
Sbjct: 183 PDHISVYMLEVHN-------DKNNSVLKKPDDQTFQRYDDFLNAISGFGYERYEISNFAL 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV---------KVGSHRVAISIEKHPESWLKMVR 309
            G    HNL YW   DY+G+G  A   +             + ++IS  K P ++  +  
Sbjct: 236 NGKYCKHNLKYWANTDYVGLGISAGGHIGFLRYNNHESFSDYFISISEGKFPRAYESLN- 294

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECERNLQRQGFI 368
                       + E++A E   M LR   G+   D E +  + N+DI    +  +  F 
Sbjct: 295 ------------TPEREALETTFMNLRTMLGV---DKEYIKEKTNIDISPVMDALKNKF- 338

Query: 369 ERVQFSRLRCTQRGMTM 385
               F   + +++GM  
Sbjct: 339 --DFFDGKKLSEKGMDF 353


>gi|317180951|dbj|BAJ58737.1| coproporphyrinogen III oxidase [Helicobacter pylori F32]
          Length = 345

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  N ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKSFERIFESIYHNASLSKDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS        N+ + +        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTHFDNIIKEVLEGFFFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEI 305


>gi|332298039|ref|YP_004439961.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           brennaborense DSM 12168]
 gi|332181142|gb|AEE16830.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           brennaborense DSM 12168]
          Length = 417

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 192/418 (45%), Gaps = 55/418 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNS----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +Y+H PFC  KC YCDF S    HV       + ++ +   E+ +  +     +  +++ 
Sbjct: 8   LYLHIPFCKAKCAYCDFFSVPAEHV------PDRYVDALCAEIAFHAEAENLAAPETVYI 61

Query: 77  GGGTPSLIEP---QNIALILDGIAKNWT---VSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           GGGTPSL+ P   + I   LD +  +      +   EIT+E NP S+     +   + GV
Sbjct: 62  GGGTPSLLSPAQLERIMFRLDSLYPSGVKPGAACAPEITLEVNPESLCEPFLETALRCGV 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NRIS+GVQ+L++ +LR + R  +   A+ A+ L      R S D+I  LP+   T +   
Sbjct: 122 NRISVGVQALDDGALRCVRRRCSRERALGALSLLSRSGVRFSADMIAGLPELGDTAFVSG 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  L+Y  +H+SLY LT+E+ T  Y+  + G L   +E      +   +++    G   
Sbjct: 182 LKEVLTYNPEHVSLYALTVEESTPLYRQIERGRLAY-TEETTDSQWLAGRALLERAGYAQ 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIG------------------------PGAHSRV 286
           YE+SN +  G  S HN  YWR   Y G G                        P A  + 
Sbjct: 241 YEVSNFAKPGCRSRHNTAYWRQRSYAGAGAGAVGTLYDTEAAAAVAITAAAREPAARVKS 300

Query: 287 KVGSHRVAISIEKHPESWLKMV------RKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            +     A  I  + + W +         +     +E+E L ++  A EF M+GLRLREG
Sbjct: 301 ALRYANTA-DIAVYTDFWTETAPDPRGFAEGADFPLERELLDADTLAFEFCMLGLRLREG 359

Query: 341 ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS-----RLRCTQRGMTMLDSVIANL 393
           I+  ++E   G+ LD       +++G    V++S     R   +  G+  L++ ++ L
Sbjct: 360 IAAGEYEERFGKKLDTAVFEKWRQKGLA--VKYSDCGEIRYALSADGILFLNAFLSEL 415


>gi|325852044|ref|ZP_08171127.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           CRIS 18C-A]
 gi|325484600|gb|EGC87516.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           CRIS 18C-A]
          Length = 427

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 66/431 (15%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQLTGPRS---- 70
           G+Y+H PFC  +C YC F S V      + K  +E ++ +   EM+              
Sbjct: 3   GLYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETA 62

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIA---------------KNWTVSSNVEITIEANP 114
            ++SI+ GGGTPS +  Q++  +   I                K     + +E+T+E NP
Sbjct: 63  ELTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRKQGCAIAPIEVTMECNP 122

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             V     +  R   VNRIS+G+Q+  ++ LRFL R H A+EA++A+   R      +S 
Sbjct: 123 DDVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGIGNISV 182

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +WE ++   L    +H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 183 DLMFGFPGETLEEWEADIAHVLELGAEHISAYSLMYEEGTPLYRLLQAGKVREMDDELYR 242

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGA-----------------------------ESL 264
            +Y++      + G   YEISN + L                                S 
Sbjct: 243 KMYDVLIDRLGSAGYEHYEISNFARLTPTLSDESPALKVQPSNLKSQISNLKVPSPFRSR 302

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
           HN +YW    YIGIG  AHS    G+ + + ++     +++  +R+      E+E + ++
Sbjct: 303 HNSSYWHDVPYIGIGAAAHS---YGNGKRSWNVAD-IRAYIDAIRER-RLPCEEEVIDAD 357

Query: 325 QQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
              ++ +M  LR REGI +    +L+   R+  +       RQG ++     RL  T++G
Sbjct: 358 THYNDTVMTALRTREGIELS---LLSAEYRSYLMHLAVPFLRQGLLKE-DGGRLHLTRKG 413

Query: 383 MTMLDSVIANL 393
           + + DS+++ L
Sbjct: 414 IYVSDSIMSEL 424


>gi|300770417|ref|ZP_07080296.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762893|gb|EFK59710.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 347

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 173/340 (50%), Gaps = 10/340 (2%)

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E++   Q    + ++S++FGGGTPS+++  +I   +D +++ + ++ + EIT+EANP  +
Sbjct: 8   ELELRSQSGDTKKLTSLYFGGGTPSILDAGHIQSFIDAVSEYYDIAEDAEITLEANPDDL 67

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +    Q  R   +NR S+G+QS  E+ L ++ R HNASEA AAI   ++  F  ++ DLI
Sbjct: 68  DHKKVQQLRHTDINRFSIGIQSFYEEDLSWMNRAHNASEADAAIKRVQDAGFENITADLI 127

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P  T  +W   + + L + + H+S Y +T+E  T      K G     +E+ +   +
Sbjct: 128 YGYPLLTDQKWNANINKLLEFEIPHISAYSMTVEPQTALDHFIKKGKSPAMNESQSAAQF 187

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
            +        G   YEISN +     + HN +YW+   YIGIGP AHS    G +R + +
Sbjct: 188 EILIDKLVNSGFEHYEISNFAKPDRYARHNSSYWKGDTYIGIGPSAHSF--NGDNR-SWN 244

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           I  +   ++K + +    V E E LS E + +E++M  LR   G+     E   G +   
Sbjct: 245 IANNA-LYIKGISEKT-PVAEVEQLSFENKVNEYIMTSLRTMWGMDTAKIEEAFGSDTLN 302

Query: 357 ECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +    +Q    QG + R+Q      T +G  + D + + L
Sbjct: 303 QLTNTIQPFIAQGEV-RLQDGHYYLTAKGKLIADHIASEL 341


>gi|217077251|ref|YP_002334969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho africanus TCF52B]
 gi|217037106|gb|ACJ75628.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho africanus TCF52B]
          Length = 372

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 169/345 (48%), Gaps = 37/345 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N+L VY+H PFC KKC YCDF S    Y+ G  EN+I +   E++        R I +++
Sbjct: 10  NTLSVYIHIPFCKKKCYYCDFVS----YEEGSVENYINALSKEIELYGDYL-KRGIRTLY 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I    I  ++  + K   +    E TIE NP S +    Q Y++ GV+R+S+
Sbjct: 65  IGGGTPSYINEHYIEQLVKKLEKYLILE---EFTIEVNPDSFDRQKAQFYKEIGVSRLSI 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS + + L+  GR+H++++A+ A ++AR  F  ++ D I  LP ++ +  E  ++   
Sbjct: 122 GIQSFDNEVLKKAGRSHDSAQALKAYNVAREYFENVNVDFIIGLPGESWSSIEEIVKFIR 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                H+S+Y L I +GT+    +K     +P E  + + Y +      + G   YEISN
Sbjct: 182 ENHPPHISVYLLEIHEGTILSNFYKK----IPEE--SYNRYEVLLDFLKSEGYERYEISN 235

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------KVGSHRVAISIEKH---PESWLK 306
            +     S HNL YW   DYIG+G  +   +       V       S+ KH   P S+  
Sbjct: 236 FALDKNYSKHNLVYWANLDYIGLGLSSGGHIGNLRYNNVSDFETYYSMLKHDKFPRSY-- 293

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                    +E+E L S       + M LR + GI  K   +L G
Sbjct: 294 ----ENENTLEREVLES-------IFMMLRTKWGIDRKLLPILPG 327


>gi|317009906|gb|ADU80486.1| coproporphyrinogen III oxidase [Helicobacter pylori India7]
          Length = 345

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +SS+ EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYRNVRLSSDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELRLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS     +   + + +        YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---CTNFDTVIKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  H+L YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 DYQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|332674027|gb|AEE70844.1| possible coproporphyrinogen dehydrogenase [Helicobacter pylori 83]
          Length = 352

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 159/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 67  TPNTLSVESFERIFESIYRNARLSLDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P  +    + EL+ A    +
Sbjct: 127 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDSENSLKEELKLAKELPI 186

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N  + I        YE+SN++  
Sbjct: 187 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNAIKEILEGFSFKQYEVSNYA-R 237

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  H+L YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 238 NYQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 288

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 289 TLSEQDKRLEKLFLGLRCALGVEL 312


>gi|94969393|ref|YP_591441.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Koribacter versatilis Ellin345]
 gi|94551443|gb|ABF41367.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Koribacter versatilis Ellin345]
          Length = 410

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 162/356 (45%), Gaps = 36/356 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PRSISS 73
           +LG+Y+  PFC  KC +C+F S V   ++  + +I     ++    Q+         + S
Sbjct: 2   ALGIYISVPFCRTKCSFCNFASGVFSRELF-DRYINIVAEDIARAEQIAPGAQFESEVDS 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS++ P  +  +   + + + VS+N E+T+E  P ++           GVNR+
Sbjct: 61  IYLGGGTPSVLAPDQLERLFLAVHEKFKVSNNTEVTVECAPGTLTREMLNALVDFGVNRV 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS  ++  R +GR H      A I+ L ++    +S DLI  LP QT   W   LQ
Sbjct: 121 SLGVQSFVDEESRSVGRLHTREITFADINSLRQHGIENISVDLIAGLPHQTPKSWRESLQ 180

Query: 193 RALSYAVDHLSLYQLTIEK----------GTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             +   V H+S+Y L +++          G   Y  H      +P ++   DLY      
Sbjct: 181 DVVDSQVPHVSVYMLEVDEDSRLGRELMAGGTRYHAH-----FVPDDDTTADLYQQACDT 235

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-----HRVAISI 297
            +  G+  YEISN +   +ES HNL YW    Y+G G  AHS +   +        A  +
Sbjct: 236 LNKAGVRQYEISNFARPESESRHNLKYWLRQPYLGFGVDAHSMLASQNCEGLRFSTADDL 295

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           ++      +  R    A  E          DE   +GLRL  G+ +   E  +G++
Sbjct: 296 DQFLAGAPRTFRHVNRAAAE----------DEAFFLGLRLNRGVDLSAIEQESGKD 341


>gi|239616730|ref|YP_002940052.1| oxygen-independent coproporphyrinogen III oxidase [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505561|gb|ACR79048.1| oxygen-independent coproporphyrinogen III oxidase [Kosmotoga
           olearia TBF 19.5.1]
          Length = 382

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 195/381 (51%), Gaps = 21/381 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ-WMRQLTGPRSISSIFF 76
           +G+Y+H PFC +KC YCDF +    +   Q E + ++ L+E++ W         + +++F
Sbjct: 4   VGIYIHLPFCKRKCDYCDFLT--LPFDADQAETYNKALLSEIELWTSN--NELMLKTLYF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+PSL +P+ +  ++D +A +       E+T+EANP  +   N + +++ GVNR+S+G
Sbjct: 60  GGGSPSLYQPRFLEKLIDRLAFSSQFQVE-ELTLEANPWEITCENLRDWKELGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   + L  +GR  N  + +  +  AR  F  ++FD I  LP ++   +E  ++    
Sbjct: 119 IQTAPTEVLNNVGRK-NPVDLLRRLGFAREAFDNVNFDFILGLPGESRETFENNIKLIER 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +H+S Y L  +  T   +    G + LPS ++  +L+          G + YEIS+ 
Sbjct: 178 FLPEHISYYILDTDHDTPLMRRVLTGKIELPSVDLITELHEHLIKTLEEKGYNRYEISSW 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G + +HN NYW  G+Y+G+G  A        +    S  ++ ++        GH   
Sbjct: 238 SREGYQCIHNKNYWENGEYVGLGISAGGHFNRFRYVNTTSFSEYVKAM-----NVGHFAR 292

Query: 317 EKEFLSSE-QQADEFLMMGLRLREGISVKDW---EMLAGRNLDIECERNLQRQGFIERVQ 372
           E E  +++ ++  E L MGLRL EG+ +  +   E L  + ++   E++L  +GF+  V 
Sbjct: 293 EYEHQNNDLEELFETLFMGLRLVEGVRISRFQVNESLLEKVVE-RIEKSL--EGFV-IVD 348

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
             R++   RG+ +   V   L
Sbjct: 349 NERIKLNDRGLDLSKVVFERL 369


>gi|291519621|emb|CBK74842.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Butyrivibrio fibrisolvens 16/4]
          Length = 370

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 182/374 (48%), Gaps = 37/374 (9%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           Q  +  +  TE++++ +      IS+I+ GGGTPS +    +  I+  + +++ V    E
Sbjct: 2   QRRYTAALCTEIKYVAKTHPGCIISTIYVGGGTPSWLSEDLMDSIITTVKQSFKVDPLAE 61

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I++E NP ++       YR  G+NR+S+G+QS  +  L+ LGR H+ +  +    L R  
Sbjct: 62  ISVECNPGTLSAEKLNVYRSIGINRLSIGLQSANDDELKELGRIHDYNRFLHTFDLVRKA 121

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV- 225
            F  ++ D++  LP QT+ + E  L        +H+S Y L IEKGT FY  +K  D V 
Sbjct: 122 GFDNVNVDIMTGLPHQTVEKLEKTLSSVTMLRPEHISAYSLIIEKGTPFYDKYK-FDAVK 180

Query: 226 ---------LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
                    LP++  A  LY  T       G   YEISN++  G    HN+ YW    Y+
Sbjct: 181 QQAGMETEDLPTDEEAYHLYKFTMEYLENKGYKRYEISNYARGGKICRHNVGYWDRVPYL 240

Query: 277 GIGPGAHS---RVKVGSHRVAISIEKHPESWLKMVRKNGHAVV---------EKEFLSSE 324
           G+G GA S    V+  + R    I K+ E+   +   NG AV           +E LS +
Sbjct: 241 GVGLGAASLFDNVRTSNMR---DIYKYVETSEAIA--NGKAVSSELSSPYFDSEEVLSKK 295

Query: 325 QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN-----LQRQGFIERVQFSRLRCT 379
              +EF+ +GLR  +G++  D+  + G  +DIE         L+ QGF+E  +  RL  T
Sbjct: 296 DAMEEFMFLGLRKIDGVARSDFFNMFG--IDIEAIYGPIITALRNQGFMEAKE-GRLFLT 352

Query: 380 QRGMTMLDSVIANL 393
             G+ + + V++  
Sbjct: 353 DIGIDVSNQVLSKF 366


>gi|257456964|ref|ZP_05622145.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema vincentii ATCC 35580]
 gi|257445673|gb|EEV20735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema vincentii ATCC 35580]
          Length = 393

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 186/391 (47%), Gaps = 31/391 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE----------NFIQSFLTEMQWMRQLTGPR 69
           G+Y+H PFC +KC YCDF S + ++ + Q+          +FI+  L ++++ ++     
Sbjct: 5   GLYIHIPFCTQKCRYCDFYS-LTQHSIAQQTGFHPYHPNPHFIERLLQDIRFFKERYAIE 63

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  +I+ GGGTPSL+ P +I  +  GI +   +    E TIEANP  +         + G
Sbjct: 64  AWRTIYIGGGTPSLLHPGDIRSLAAGIREGQMLPVE-EFTIEANPEDIHEEWLAACSEGG 122

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
           +NR+S+GVQS +   L   GR  +  + I A+   ++ +  ++S DLI  L  QT     
Sbjct: 123 INRLSIGVQSFDNTVLAANGRRGSKEKTIQALETIKSRWHGKLSCDLIAGLTGQTAQSLS 182

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +++R + Y ++HLSLY L   +            L    E+   +L     ++ +A+G 
Sbjct: 183 DDVRRLIDYRIEHLSLYGLCSSE-----------PLPETREDFISELLQQNTALLAANGY 231

Query: 249 HAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPES 303
             YE+SN S+     S+HN  YW+   Y GIGP A   +      G    A   E   + 
Sbjct: 232 VRYEVSNFSYRDKHRSVHNQIYWKMEPYAGIGPAACGTLVHEDTSGGFTAAERFEGIKDI 291

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
              M   +  +V   E +S +   +E L+MG RL EGI+ KD+    G ++       L 
Sbjct: 292 GRWMTAPDRTSVYTYERISRKTFLEEVLLMGFRLSEGINRKDFSRRFGADITAYIGNTLS 351

Query: 364 R--QGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           R  +    R++  R   T+ G+  L+  + +
Sbjct: 352 RWEKSGQCRIEPERTYLTEEGLLFLNRFLVD 382


>gi|152990886|ref|YP_001356608.1| coproporphyrinogen III oxidase [Nitratiruptor sp. SB155-2]
 gi|151422747|dbj|BAF70251.1| oxygen-independent coproporphyrinogen III oxidase [Nitratiruptor
           sp. SB155-2]
          Length = 345

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 141/266 (53%), Gaps = 22/266 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC  KC YC FNS    + + +E ++ +FL ++++     G + + +++ GGGT
Sbjct: 3   LYCHIPFCDSKCHYCAFNSFTSNHHLKKE-YMDAFLRQLKFDLDRFGVKKLETVYIGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS I+P+    + D I     +  + EITIEANP+S   +  +G +  G+ RIS GVQS 
Sbjct: 62  PSTIKPKLYEPLFDTITN--LIDEDTEITIEANPNSATKSWLEGVKSLGITRISFGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ LGR H   +AI A+  A +     +S DLIY     +    + E+ +A+   +
Sbjct: 120 HEEKLKLLGRAHTPQDAIKAVETAFKAGIEHISIDLIYDTILDSKELLQNEVMQAIKLPI 179

Query: 200 DHLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           DH+S Y L +E+GT F    +M KD       E+     Y L + I        YE+SN 
Sbjct: 180 DHISAYALILEEGTPFENKMEMKKD------DEHQG---YFLKELIP----FEQYEVSN- 225

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGA 282
            F    S HNL YW+   Y+GIG GA
Sbjct: 226 -FGEYRSKHNLGYWQLKSYLGIGCGA 250


>gi|317182475|dbj|BAJ60259.1| coproporphyrinogen III oxidase [Helicobacter pylori F57]
          Length = 345

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 160/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ +  E ++Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYEDKHGLKGE-YVQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKSFERIFESIYRNASLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N+ + +        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNIIKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  H+L YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|328948021|ref|YP_004365358.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           succinifaciens DSM 2489]
 gi|328448345|gb|AEB14061.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           succinifaciens DSM 2489]
          Length = 390

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 18/354 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NS  +YVH PFC+KKC YCDF S     ++    +++    E  +  +        +I+ 
Sbjct: 2   NSAALYVHIPFCLKKCSYCDFFSVENSGRIDNL-YLECLKNEAVFYAEKYKIDFWRTIYI 60

Query: 77  GGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           GGGTPSL     IE   I L    + KN T    +E TIE NP SV         K G+ 
Sbjct: 61  GGGTPSLLSASQIEKLAIYLKNSCLCKNITP---LEFTIEMNPESVSKEKLDSAWKNGIT 117

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+SLG+QSL E +LR + R+ N   AI+A+   ++ +   +S D I  LP Q+  ++ + 
Sbjct: 118 RLSLGIQSLNENALRAVERHCNVETAISALETVKSCWKGELSLDAIAGLPCQSEKEFLLS 177

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +SY   H+SLY LT+E+ T   +    G +    +  A   +   + +   +G   
Sbjct: 178 LEKIISYNPGHISLYTLTVEEKTPLARNISSGKINFDFDE-ADSQWLSGRDLLLKNGFFQ 236

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEKHPESWLKM 307
           YE+SN    G +S+HN +YW   DY+GIG  A       K        +I ++   W K 
Sbjct: 237 YEVSNFCQNGKKSIHNSSYWAQKDYVGIGCSACGTFYGNKSFRWTNTENILEYENFWSKP 296

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIE 357
                      E  S E +  EFLMMGLR  EG++     K++  +   N D+E
Sbjct: 297 FPLESEIPRSIEEFSLETREFEFLMMGLRTFEGLNSARYRKNFRFVEPWNGDLE 350


>gi|257126826|ref|YP_003164940.1| oxygen-independent coproporphyrinogen III oxidase [Leptotrichia
           buccalis C-1013-b]
 gi|257050765|gb|ACV39949.1| oxygen-independent coproporphyrinogen III oxidase [Leptotrichia
           buccalis C-1013-b]
          Length = 436

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 33/291 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            N   +Y+H PFC KKC YCDF + VR  K  ++ +I   + E++   + T      +I+
Sbjct: 7   KNIDAIYIHIPFCDKKCEYCDFCTFVRMEKEYRK-YIDYLIREIRMYPKFT----YDTIY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS++  + I  I+  +   WT   N EIT+E NP+ + +   +  R+ G+NR+S+
Sbjct: 62  FGGGTPSVLPVEMIREIMQELE--WT--ENTEITLELNPTDMTLEKLKEIREIGINRLSI 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +   L+F+GR H++ +A+    +AR   F  ++ DL++ +P Q++   + +L   
Sbjct: 118 GIQSFQNHVLKFIGRQHSSDDAVNVYRMAREAGFENITVDLMFGIPNQSIEDLQRDLNIL 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                +++S+Y L  E+GT+F+   + G L    ++V   +Y +     + +G   YEIS
Sbjct: 178 KELKPENVSIYSLIWEEGTVFWSKLQKGILSEIDQDVEAQMYEMIIEFFNENGYCHYEIS 237

Query: 255 NHSFLG--------AESL---------------HNLNYWRYGDYIGIGPGA 282
           N + +         +E++               HNL YWR   +IG+G  A
Sbjct: 238 NFARIDENLWKNQISENIEDFEMIKKRQKNGGRHNLKYWRNKKFIGVGMSA 288


>gi|217032238|ref|ZP_03437736.1| hypothetical protein HPB128_2g40 [Helicobacter pylori B128]
 gi|298735755|ref|YP_003728280.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
 gi|216946109|gb|EEC24720.1| hypothetical protein HPB128_2g40 [Helicobacter pylori B128]
 gi|298354944|emb|CBI65816.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
          Length = 345

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YIQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESIHQHARLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS     +  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---CTNFDNVIKEALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 GYQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKRLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 282 TLNKQDKRLEKLFLGLRCVLGVEL 305


>gi|308062505|gb|ADO04393.1| coproporphyrinogen III oxidase [Helicobacter pylori Cuz20]
          Length = 345

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIYRNARLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N  + I        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNAIKEILEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  H+L YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCALGVEL 305


>gi|255071289|ref|XP_002507726.1| predicted protein [Micromonas sp. RCC299]
 gi|226523001|gb|ACO68984.1| predicted protein [Micromonas sp. RCC299]
          Length = 435

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 177/369 (47%), Gaps = 49/369 (13%)

Query: 21  VYVHWPFCVKKCPYCDF---------NSHV-----RRYK--VGQENFIQSFLTEMQWMRQ 64
            Y+H PFC ++C YCDF          SH+     RRY   + +E  +  + +       
Sbjct: 7   AYLHLPFCRRRCHYCDFAISLVGDDAESHIALQGMRRYVDFLIREIALTPYSSSTCDFEG 66

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  + ++FFGGGTPSL+ P  +  +++ + + + +  + EI++E +P + +      
Sbjct: 67  GDQP-PLRTVFFGGGTPSLLPPDLLGSVIEALRERFGIDPDAEISMEMDPGTFDAEKLTQ 125

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPK 181
           Y   GVNR+SLG+QS +   L++ GR H    + EA+AA+   R +  R S DLI  +P 
Sbjct: 126 YVDLGVNRVSLGLQSFDANVLKWAGRGHTLEESREALAAVRANRGV-ERWSLDLISGMPG 184

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF---YKMHKDGD------LV------- 225
            T   W   L+ A+  A  H+S+Y L +E+GTLF   Y   + G+      +V       
Sbjct: 185 LTKEAWSDSLKEAIDVAPHHISVYDLQVEEGTLFGSWYNASRIGENGTNKTMVSNLNSRM 244

Query: 226 ----LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW--RYGDYIGIG 279
               LPSE+ + +++++        G   YE+S+++ +G+   HN  YW  R G Y G G
Sbjct: 245 ARPELPSEDESAEMFHMASETLRGAGYEHYEVSSYAKVGSRCAHNQVYWTGRQGWY-GFG 303

Query: 280 PGAHSRVKVGSH----RVAISIEKHPESWLKMVRKNGHA-VVEKEFLSSEQQADEFLMMG 334
             A S    G      R     E + E+    + +   A  ++  F +  +   E LM+G
Sbjct: 304 MSATSFTAHGKQFARPRKMRDYEAYVEAMAAFIDEPSRARTIKSSFEARAEALLERLMLG 363

Query: 335 LRLREGISV 343
           LR R G+ +
Sbjct: 364 LRTRNGVDL 372


>gi|330836550|ref|YP_004411191.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           coccoides DSM 17374]
 gi|329748453|gb|AEC01809.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           coccoides DSM 17374]
          Length = 400

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 185/403 (45%), Gaps = 26/403 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQW 61
           LS++  +M       + +Y+H P+C  +C YC F S  R   +   Q+ + +  L E++ 
Sbjct: 5   LSSFSRDM------DISLYLHIPYCDTRCSYCAFYSLGRHDWFMGAQDVYARRLLEEIRT 58

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVN 120
           +    G R   SIF GGG P  +EP     +L  I K  T      E+T+E NP S++  
Sbjct: 59  VTSWMG-RPFHSIFVGGGNPGCLEPD----VLHSILKETTCHGMPAELTVEMNPESLDER 113

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLI 176
                      R+S+GVQSL   +L  LGRN      +  +  A  +  R    ++FD+I
Sbjct: 114 RMD-ILAMHATRLSMGVQSLSPFTLSVLGRNSCKDRTLEGMEKALFLHGRAGLALNFDII 172

Query: 177 YALPKQTMTQWEMELQRALS--YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             +P Q +     ++Q  LS  +  DH+SLY LT+E+GT   +    GD+    E+   D
Sbjct: 173 TCVPGQDVRSAVNDMQEILSTGHEADHISLYNLTVEEGTALAQRIDRGDVTPLDEDSQAD 232

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           +     ++ +  G   YE+SN +  G ES+HNL YW    YIG+G GA       S R  
Sbjct: 233 ILQACWNVLAEKGYTHYEVSNFARPGHESIHNLCYWSGKQYIGLGSGASGTSLAPSGRTV 292

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                +P    + VR         E L + +  +E L+  +R   GI    +    G + 
Sbjct: 293 --RWTYPPDIHRYVRGASGTGYAGEELGTGEIMEEILLTQMRTSVGIDKNAFAARTGLDF 350

Query: 355 DIECERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           D     ++ R  QG  +    S    T+RGM +LD+++ + A+
Sbjct: 351 DRIFSPSIARMEQGTYKDSS-SHFVVTERGMMILDAIVLDFAL 392


>gi|291276378|ref|YP_003516150.1| putative oxygen-independent coproporhyrinogen III oxidase HemN
           [Helicobacter mustelae 12198]
 gi|290963572|emb|CBG39404.1| putative oxygen-independent coproporhyrinogen III oxidase; HemN
           [Helicobacter mustelae 12198]
          Length = 353

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 29/341 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C YC FNS   ++ +    +I +  T++      +  + + SIFFGGGT
Sbjct: 3   LYIHIPFCTSRCGYCTFNSFENKHALIPA-YINALCTDLA---SHSTSQRLDSIFFGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++P+    I   + ++++++   EIT+E+NP  V     +     G NR+S GVQS 
Sbjct: 59  PNTLDPRAFEKIFATLHRHFSLAPKCEITLESNPDLVTKQWCKDLHTLGANRLSFGVQSF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L FL R H+  +   A+  A R  F  +S DLIY  P     + + E   A +  +
Sbjct: 119 FADKLAFLQREHSQRDIHHALECATRAGFQNLSIDLIYDTPLDNEKRIKEETSLASALPI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y LTIEK +   ++ K G      +     L++  +   + H    YE SN++  
Sbjct: 179 NHLSAYSLTIEKQS---RLQKQG-----VQEAKESLFDCIRQNLAKHNFTQYETSNYA-R 229

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           G +  HNL YWR  DYIG G GA  +   V+  +H+   +    P       RK      
Sbjct: 230 GYKVAHNLAYWRNEDYIGCGCGAVGKRGDVRSYTHQNLEAYIADP-----TYRK------ 278

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KE LS E +  E L +GLR   G+S++ +++      +IE
Sbjct: 279 -KERLSKEDKVLETLFLGLRSEVGVSLEVFQIQKTSTQNIE 318


>gi|208435120|ref|YP_002266786.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
 gi|208433049|gb|ACI27920.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
          Length = 345

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 157/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   ++ Q + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKQALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKAFERIFESIYHHARLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS        N+ + +        YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PSR---THFDNVVKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   VK         IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVKNERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|116624996|ref|YP_827152.1| coproporphyrinogen III oxidase, anaerobic [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228158|gb|ABJ86867.1| coproporphyrinogen III oxidase, anaerobic [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 359

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 158/330 (47%), Gaps = 31/330 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           GVYV +PFC +KC YC+F S V  +   QE  ++ +   E++  +    P    +++ GG
Sbjct: 3   GVYVSYPFCAQKCTYCNFASGV--FPRDQEAPYLDALAREIRAHQWRWNP---DTVYLGG 57

Query: 79  GTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTPS + P  +  +LD I  + W      E T+EA P ++     + +  AG+NR+SLGV
Sbjct: 58  GTPSNLAPVALRGLLDLIPGRPW-----AEATLEAAPGNITPELARSWSDAGINRVSLGV 112

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  +R  GR H A    A I   R+   R ++ DLI  L  QT   W   L     
Sbjct: 113 QSFSEPEIRRSGRKHTAQIVAAEIAALRDAGIRDINIDLIAGLAAQTADSWRESLDWIER 172

Query: 197 YAVDHLSLYQLTIEKGT-----LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            A +H+S+Y L I++ +     L     + G L  PSE+   D Y       +  G+  Y
Sbjct: 173 LAPEHVSVYMLEIDEDSRLGKELMLGGVRYGALDTPSEDATADFYEYAVERLAGIGIARY 232

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G ES HNL YW    Y+G G  AHS      H       ++PES    +   
Sbjct: 233 EISNFARPGHESRHNLKYWCLEPYVGFGADAHSFDGSTRH-------QNPESLADYLAGT 285

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
              V ++  LS     DE L +GLRL  G+
Sbjct: 286 AQ-VPDQPHLS-----DERLFIGLRLSAGV 309


>gi|317013009|gb|ADU83617.1| coproporphyrinogen III oxidase [Helicobacter pylori Lithuania75]
          Length = 345

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIHRNARLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS     +  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---CTNFDNVIKEALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  +K          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVADERFYAKKLIENYIKDPIKR---------QIE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 282 TLNKQDKRLEKLFLGLRCVLGVEL 305


>gi|325971236|ref|YP_004247427.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta sp.
           Buddy]
 gi|324026474|gb|ADY13233.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta sp.
           Buddy]
          Length = 387

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 190/396 (47%), Gaps = 40/396 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT--EMQWMRQLTGPRSISSIFF 76
           L +YVH PFC   C YC F S     K     +I  ++   E + +   +     ++IF 
Sbjct: 10  LSLYVHIPFCTTCCSYCAFYSEP---KEANSKYIDVYVDRLEQEILACASSVDRFTTIFV 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG P  +    +  +L  +A    +S   E+TIE NP +   + F  + +  V R+S+G
Sbjct: 67  GGGNPGCLSASQLRRLL--VAAKAGLSD--EVTIEMNPETFSQDFFCLFSEGLVTRLSMG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP----RMSFDLIYALPKQTMTQWEMELQ 192
           +QS+++ +L  LGRN +  + + AI LA+         +SFDL+  LP QT      +LQ
Sbjct: 123 IQSMDDPTLARLGRNAHRKDNLRAIALAQKAHALYGIELSFDLMVCLPGQTTELAISDLQ 182

Query: 193 RALSYA-VDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHA 250
             LS++  DH+SLY LT+E+GT+  +    G L VL  +     L  L   +    G   
Sbjct: 183 EILSFSEADHISLYCLTVEEGTVLAQQIGLGQLHVLDEDGQQAFLQTLWNELARL-GFTH 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN      +S HN  YWR  +YIG+G  A S V  G+     S  +  + +      
Sbjct: 242 YEVSNFCRNDKKSKHNQVYWRLDNYIGLGSSAASTVHEGTLSRHYSQIQDLKEYASSSLF 301

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGIS--------VKDWEMLAG---RNLDIECE 359
           +G+   E+EF+ + QQ +E+LMM LR   GI          +D++ L G     LD    
Sbjct: 302 SGY---EQEFVDANQQIEEYLMMALRTNAGIDKQTFNTRYSQDYDKLFGSAISTLDSAWY 358

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           RN  +Q ++          T+ G  +LD ++  LA+
Sbjct: 359 RN-TKQLYV---------LTEVGFMVLDEILLRLAL 384


>gi|254779770|ref|YP_003057876.1| coproporphyrinogen III oxidase [Helicobacter pylori B38]
 gi|254001682|emb|CAX29908.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Helicobacter
           pylori B38]
          Length = 345

 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 157/323 (48%), Gaps = 20/323 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T  + I SIF GGGT
Sbjct: 3   LYIHIPFCESKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTHEK-IESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHASLSLDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K  K      PS     +  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNVVKEALEGFSFKQYEVSNYA-RD 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISV 343
           LS + +  E L +GLR   G+ +
Sbjct: 283 LSEQDKRLEKLFLGLRCELGVEL 305


>gi|294054734|ref|YP_003548392.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614067|gb|ADE54222.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
          Length = 379

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 181/381 (47%), Gaps = 24/381 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +LGVY H PFC   C +C F     R +   + ++ +   E   + Q    R + ++F+G
Sbjct: 7   ALGVYCHVPFCASTCDFCAFYQEKPR-RGDLDRYLDAMDREFDLLPQ---DRVVDTVFWG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP L+  +++  +   + K +      E TIE  PS+V+ +     R  GV RIS+GV
Sbjct: 63  GGTPGLLAAKDLERLGASMLKRFKRPPK-EWTIEMAPSTVKADKMAVLRDLGVTRISMGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L  LGR H  ++   A  + ++  F + + DL++A+P Q + QWE  ++ A  
Sbjct: 122 QSFDAELLESLGRLHRPNQIYKAWDIVQSAGFAQTNLDLMFAIPNQRIEQWEAAIREAAQ 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS Y LT E+ T  Y     G+L +  E   +  Y     +    G   YE+SN 
Sbjct: 182 LGPSHLSTYCLTFEEDTALYVKLSKGELKI-DEARELRFYERGWELLEELGYAQYEVSNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +   ++ LHNLN WR  ++IG GP A S+      +   +I    ++W   ++       
Sbjct: 241 AKPESQCLHNLNTWRMTEWIGCGPSAASQYAGQRWQRPANI----DTWAAGMQSGQPVRE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--------CERNLQRQGFI 368
           E   L       + ++ GLR+  G+   D + L+ R  + E        C R L+ +G +
Sbjct: 297 EIVDLDDSILFSDSVVFGLRMNAGV---DLDALSSRYPEAETVDGVRSLC-RKLESEGLL 352

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
              + +++R T  G  + DSV
Sbjct: 353 -VAEGAQVRLTHAGRLVCDSV 372


>gi|237752699|ref|ZP_04583179.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376188|gb|EEO26279.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 360

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 179/349 (51%), Gaps = 35/349 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +Y+H PFC  KC YC FNS   +  + +  ++Q     + + +  L     I+S++ G
Sbjct: 6   LSLYLHIPFCDSKCGYCAFNSKTNKNHL-KSIYMQKLAVYLHYKLESLQERVQITSVYIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTPS++E    + + + I + +   +    EI+IEANP+ + +   +  R  GVNR+S+
Sbjct: 65  GGTPSVVE----SYLYENIFEEFLPFLKKGAEISIEANPNHLSLEWLRAMRDYGVNRLSI 120

Query: 136 GVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS   Q L FL R H N +  +A  +  +  F  +S DLIY  P       E EL+ A
Sbjct: 121 GVQSFNAQKLAFLEREHKNKNTFLALDYAVKAGFDNLSIDLIYGTPLCDEALLEQELKTA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA---- 250
           L   + H+S Y L+++ G+ FY   ++ + +      ++D  +    ++  H + A    
Sbjct: 181 LGLPLSHISAYHLSLDPGSRFY---REKEQIYKESQRSLD-GDFGGFLSIGHFIAAHLQK 236

Query: 251 ---YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN+   G  SLHNL+YW  GDYIGIG GA   ++     +  S+ K  E +L+ 
Sbjct: 237 FLHYEVSNY---GKASLHNLHYWSGGDYIGIGAGAVGCIQ----GIRTSMPKSIEHFLED 289

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             ++      KE L+ + +  E L +G R   G+  K  ++   +NL+I
Sbjct: 290 FSES------KEILTQKDKELEHLFLGFRSCVGVERK--KISNQKNLEI 330


>gi|261838549|gb|ACX98315.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 51]
          Length = 352

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 157/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESIFIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  N  +SS+ EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 67  TPNTLSVESFERIFESIYHNARLSSDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     ++++    +S DLIY  P  +    + EL+ A    +
Sbjct: 127 FREDKLLFLERQHSKNIAPVIETISKSGIENISIDLIYNTPLDSENSLKEELKLAKELPI 186

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K                N  + +        YE+SN++  
Sbjct: 187 NHLSAYALSIEKNTNLEKNAKKLS--------CTHFDNTIKEVLEGFSFKQYEVSNYA-R 237

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  H+L YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 238 NYQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 288

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 289 TLNKQDKRLEKLFLGLRCVLGVEL 312


>gi|317178479|dbj|BAJ56267.1| coproporphyrinogen III oxidase [Helicobacter pylori F30]
          Length = 345

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 156/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ +  E ++Q+   +++  + Q   P  I S+F GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYEDKHGLKGE-YVQALCLDLKHALSQTDEP--IESVFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  N  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVKSFERIFESIYHNAHLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS        N  + +        YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---CTHFDNAIKEVLEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|118354812|ref|XP_001010667.1| oxygen-independent coproporphyrinogen III oxidase, putative family
           protein [Tetrahymena thermophila]
 gi|89292434|gb|EAR90422.1| oxygen-independent coproporphyrinogen III oxidase, putative family
           protein [Tetrahymena thermophila SB210]
          Length = 444

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 218/437 (49%), Gaps = 57/437 (13%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQ-- 64
           +NN+T    N   +Y+H PFC KKC YC F  H + + K   E+F     T +++++Q  
Sbjct: 2   KNNITRNIEN---IYIHLPFCQKKCFYCSFPVHAIGKNKQDNEHFDNIQQTYLKYIKQEI 58

Query: 65  -------------LTGPRSISSIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITI 110
                        +   + + SI+FGGGTPSL +P+ I  IL+ I ++ + +  + EIT+
Sbjct: 59  VQTNIMLFKHHNQIWQKKPLKSIYFGGGTPSLFQPEYIKEILNLIQSEGFFIQDDTEITM 118

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN---- 166
           E +P + +    Q Y +  +NRISLG+QS  ++ L+ L R  NA     AI + +N    
Sbjct: 119 ECDPGTFDAEKIQFYEELKINRISLGIQSFNDKILQNLNRPQNAQTNYEAIQILKNSAKF 178

Query: 167 -IFPRMSFDLIYALPKQTMTQ---------------WEMELQRALSYAVDHLSLYQLTIE 210
                +S DLI   P+ T ++               W+ +L++ +     H+S+Y L IE
Sbjct: 179 KYLSNVSIDLIMNQPQMTCSKDKNNLSINLNEVDQIWDQDLEQVVQLKPGHISIYSLAIE 238

Query: 211 KGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH--SFLGAESLHN 266
            G+ FY+ +  ++G   LPS+  A D +  T    S    H YEIS++  S L  +  HN
Sbjct: 239 PGSYFYEKNNFREGQFPLPSDERAADNFIKTHQKLSPIYNH-YEISSYVRSDLN-QPKHN 296

Query: 267 LNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK-EFLSSE 324
             YW    D++  G GA S +    +    ++ ++ E +++ + KN +  +E  E  S  
Sbjct: 297 PIYWEGNKDFLAFGMGASSLLNYRRYTRPKTVTRYYE-YVEQLNKNPNFYLENGEDESDI 355

Query: 325 QQADEFLMMG-LRLREGISVKDWEMLAGRNL-DIEC---ERNLQRQGFI--ERVQFSRLR 377
           Q   E ++MG LR  +G+ + D +   G ++ +I C   E  L +  ++  +  ++ +L+
Sbjct: 356 QSQIESILMGRLRTFQGLDLLDIKNSYGEDIYNIICNKIEMLLLKSPYLIFQNQRYLKLK 415

Query: 378 CTQRGMTMLDSVIANLA 394
           C + G  + D ++A ++
Sbjct: 416 CPE-GYLVCDDIVAEIS 431


>gi|327312397|ref|YP_004327834.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           F0289]
 gi|326946389|gb|AEA22274.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           F0289]
          Length = 434

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 198/438 (45%), Gaps = 73/438 (16%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQLTGPRS---- 70
           G+Y+H PFC  +C YC F S V      + K  +E ++ +   EM+              
Sbjct: 3   GLYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETA 62

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIA---------------KNWTVSSNVEITIEANP 114
            ++SI+ GGGTPS +  Q++  +   I                +    ++ +E+T+E NP
Sbjct: 63  ELTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRRQGCAAAPIEVTMECNP 122

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             V     +  R   VNRIS+G+Q+  ++ LRFL R H A+EA++A+   R      +S 
Sbjct: 123 DDVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGIGNISV 182

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +WE ++   L    +H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 183 DLMFGFPGETLEEWEADIAHVLELGAEHISAYSLMYEEGTPLYRLLQAGKVREMDDELYR 242

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGA-------------------------------- 261
            +Y++      + G   YEISN + L                                  
Sbjct: 243 KMYDVLIDRLGSAGYEHYEISNFARLTPTLSDESPTLKVQPSKSSPQISNLKSQISNLKV 302

Query: 262 ----ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HN +YW    Y+GIG  AHS    G+ + + ++     +++  +R+      E
Sbjct: 303 PSPFRSRHNSSYWHDVPYVGIGAAAHS---YGNGKRSWNVAD-IRAYIDAIRER-RLPCE 357

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFSR 375
           +E + ++   ++ +M  LR REGI +    +L+   R+  +       RQG ++     R
Sbjct: 358 EEVIDADTHYNDTVMTALRTREGIELS---LLSAEYRSYLMHLAVPFLRQGLLKE-DGGR 413

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T++G+ + DS+++ L
Sbjct: 414 LHLTRKGIYVSDSIMSEL 431


>gi|322378382|ref|ZP_08052837.1| coproporphyrinogen III oxidase [Helicobacter suis HS1]
 gi|322380266|ref|ZP_08054486.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS5]
 gi|321147303|gb|EFX41983.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS5]
 gi|321149195|gb|EFX43640.1| coproporphyrinogen III oxidase [Helicobacter suis HS1]
          Length = 353

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 145/269 (53%), Gaps = 13/269 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KC YC FNS V    + +E + Q+ + +++    +T P  +SSIF GGG
Sbjct: 9   SLYLHIPFCQSKCGYCAFNSFVGLDAL-KEAYTQALICDLK-ASLITSP-VLSSIFVGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ ++P+    I + I+K   + S++EIT+EANP  +        ++ G  R+S+GVQS
Sbjct: 66  TPNSLKPKFYEQIFNAISKYAYLKSDIEITLEANPDLINQEWCCILKQLGATRLSIGVQS 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L  L R H+ S    A+ +A ++ F  +S DLIY  P  T  + E E ++A    
Sbjct: 126 FFPDKLHLLQREHDHSAIFKALDIAYQSGFEHLSIDLIYNTPLDTKERLEEECKQASKLP 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DHLS Y LT+E  T   ++ KD   + P E + +D +   +      G   YE+SN++ 
Sbjct: 186 IDHLSAYSLTLEDNT---RLIKD---INPCELLHLDTF--LKECLKDRGFKQYEVSNYA- 236

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
              +  HNL YW   +Y G G GA  R+K
Sbjct: 237 RDYQVRHNLGYWEGLEYFGCGAGAVGRIK 265


>gi|257461411|ref|ZP_05626507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter gracilis RM3268]
 gi|257441134|gb|EEV16281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter gracilis RM3268]
          Length = 357

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 22/326 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KCPYC F S   ++ + +  F ++   E++          IS++F GGGT
Sbjct: 3   IYIHVPFCTSKCPYCAFGSFSDKFSLAKSYF-RALKLEVRDFLAKNPHAQISTLFIGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS ++      I   +A ++T  +  EI+ EANP+S      +   + GVNRIS G QS 
Sbjct: 62  PSAVDAGLYDEIFALLAPHFT--AKAEISSEANPNSASPAWLRAMCELGVNRISFGAQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L+FLGR H+A++   A+  A+   F  ++ DLIYA         + E+       V
Sbjct: 120 NDAKLKFLGRAHSAAQIFLAVQNAKAAGFDNINLDLIYASKFDDKRNLKFEMDALARCEV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLS Y L++E+ T F+     G      E+VA  L     ++ +  G   YEISN +  
Sbjct: 180 PHLSAYALSLEENTPFF-----GRESFKRESVA--LAKFLFALAADSGFRQYEISNFAAR 232

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           G    HNL YWR  DY+G G  A     VG S ++ +S  K+ + ++    +      ++
Sbjct: 233 GLRCKHNLAYWRGEDYVGFGAFA-----VGTSAQMRLSSPKNLQDYIADPLQK-----QR 282

Query: 319 EFLSSEQQADEFLMMGLRLREGISVK 344
           E LS++ +  E + +GLR   G   +
Sbjct: 283 EALSAQDKKLERIFLGLRCVLGFEAQ 308


>gi|315452811|ref|YP_004073081.1| oxygen-independent coproporhyrinogen III oxidase; HemN
           [Helicobacter felis ATCC 49179]
 gi|315131863|emb|CBY82491.1| oxygen-independent coproporhyrinogen III oxidase; HemN
           [Helicobacter felis ATCC 49179]
          Length = 351

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 141/271 (52%), Gaps = 15/271 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +S  +Y+H PFC  KC YC FNS      + Q  ++ +   +M+    L G R I SIF 
Sbjct: 6   SSKSLYIHIPFCKSKCGYCAFNSFSGLEDL-QNVYVNALCKDME--TSLQGER-IVSIFI 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++++ ++   I + IA++ +V SN EIT+EANP  V +      +  G+ R+S+G
Sbjct: 62  GGGTPNILKIKHYDQIFNVIARHASVPSNTEITLEANPDLVSLEWCLALKNLGMTRLSIG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  E  L FL R+H       A+  A ++    +S DLIY  P  T    E E+  A 
Sbjct: 122 VQSFFESKLCFLQRDHMPKNVYKALEYAQKSAIEHISIDLIYNTPLDTAQNLEKEVALAS 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +DHLS Y LT+E  T   K       + P     +D+  + ++   A G   YE+SN
Sbjct: 182 GLPIDHLSAYSLTLEDNTRLAK-------IAPKNLPELDM--VMRASLEAQGFKHYEVSN 232

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           ++       HNL+YW   +YIG G GA  RV
Sbjct: 233 YA-RNYRVKHNLHYWNSLEYIGCGAGAVGRV 262


>gi|15645840|ref|NP_208018.1| coproporphyrinogen III oxidase [Helicobacter pylori 26695]
 gi|2314389|gb|AAD08271.1| oxygen-independent coproporphyrinogen III oxidase (hemN)
           [Helicobacter pylori 26695]
          Length = 352

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 159/324 (49%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S+F GGG
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESVFIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 67  TPNTLSVKAFERIFESIYQHASLSLDCEITTEANPELITKAWCQGLKGLGINRLSLGVQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A A   + ++    +S DLIY  P       + EL+ A    +
Sbjct: 127 FREDKLLFLERQHSKNIAPAIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPI 186

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS        N+ + I        YE+SN++  
Sbjct: 187 NHLSAYALSVEKNTNLEKNAKK-----PS---CAHFDNVVREILEGFSFKQYEVSNYA-R 237

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  L+          + E
Sbjct: 238 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKKLIENYIKDPLQR---------QVE 288

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            L+ + +  E L +GLR   G+ +
Sbjct: 289 TLNKQDKRLEKLFLGLRCVLGVEL 312


>gi|110004346|emb|CAK98684.1| hypothetical oxygen-independent coproporphyrinogen III oxidase
           oxidoreductase protein [Spiroplasma citri]
          Length = 359

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 190/383 (49%), Gaps = 40/383 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFG 77
           +YVH PFC   C YCDF     + K  +   I  +LT ++  +++T P    ++ +I+ G
Sbjct: 5   LYVHIPFCDHICFYCDF----FKIKKSRPIMIDEYLTSLE--QEITQPHPNFALKTIYLG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++   +  +L  + K     S +E TIE NP  +  +  Q  +K  +NR+S+GV
Sbjct: 59  GGTPNSLDDIQLERLLQLLQK-VVQGSIIEYTIELNPEKITKSQLQLLKKYHINRLSIGV 117

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           ++  +Q L+ + R HN+++ +   +LAR   F  +SFDLIY L  QT    E +L     
Sbjct: 118 ETFNDQLLKKVNRYHNSADVVNNYYLARQEGFDNISFDLIYNLFDQTQVDIEADLLMIQK 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+S Y L +++ + + K      L LP  ++A D   +  +  +  G   YEISN+
Sbjct: 178 LQPDHISWYSLILKENSYWGKTK----LKLPEYDIAFD--EIINTALTKIGYERYEISNY 231

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNL YW    +  +GP A   +    + +           L+  RK  +   
Sbjct: 232 TNNKKKSRHNLAYWTNKSFWLLGPSAAGFINNDGYYL-----------LQNSRKYANWTQ 280

Query: 317 EKEFLSSEQQADEFLMMGLRLREGIS---VKDWEMLAG---RNLDIECERNLQRQGFIER 370
            K  LS +    + LMMGLR+ +GI    VKD +         +D+E ++N     F + 
Sbjct: 281 TKTELSLKDYYFQILMMGLRVLDGIDLVKVKDAKKAVNYYQSKIDVEVQKN---NLFFDN 337

Query: 371 VQFSRLRCTQRGMTMLDSVIANL 393
              + LRCT +G+ +L+ ++ N+
Sbjct: 338 ---NHLRCTSQGLNILNDILVNI 357


>gi|218196346|gb|EEC78773.1| hypothetical protein OsI_19006 [Oryza sativa Indica Group]
          Length = 495

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 177/378 (46%), Gaps = 50/378 (13%)

Query: 23  VHWPFCVKKCPYCDF------NSHVRRYKVGQE-------NFIQSFLTEMQWMRQLTGPR 69
           VH PFC K+C YCDF       S       G +       ++++  L E+   R ++   
Sbjct: 49  VHLPFCRKRCHYCDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDG 108

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPSL+ P+ +A +LD +   + +S++ E++IE +P + +    +     
Sbjct: 109 VPLETVFFGGGTPSLVPPRLVAAVLDALRARFGLSASPEVSIEMDPGTFDAAKLRELVGL 168

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQ 186
           GVNR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT   
Sbjct: 169 GVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEM 228

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---------------------------- 218
           WE  L+  +     H+S+Y L IE+GT F ++                            
Sbjct: 229 WEESLRCTVDARPTHVSVYDLQIEQGTKFGQLWVEPIRLTLNPVLDKVATQSFFIINACR 288

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
           +  G   LP+E  + + Y +     S  G + YEIS++   G E  HN+ YW+   +   
Sbjct: 289 YTPGVYPLPNEKDSANFYKIASKRLSEAGYNHYEISSYCKTGYECKHNVTYWQNRSFYAF 348

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS--EQQADEFLMMGLR 336
           G G+ S +    + +  S  +  + + + V+K  + V   E  +S  +  A + +M+ LR
Sbjct: 349 GLGSASYI----NGIRFSRPRRMKEYAEWVQKLENGVWSHESGNSGIKDMAMDVVMLSLR 404

Query: 337 LREGISVKDWEMLAGRNL 354
              G+ V+ +    GR+L
Sbjct: 405 TAWGLDVQSFSKTFGRSL 422


>gi|210135385|ref|YP_002301824.1| coproporphyrinogen III oxidase [Helicobacter pylori P12]
 gi|210133353|gb|ACJ08344.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori P12]
          Length = 345

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 156/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIHHHARLSLDCEITTEANPELITKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L+IEK T   K  K      PS     +  N  +          YE+SN++  
Sbjct: 180 NHLSAYALSIEKNTNLEKNAKK-----PS---CTNFDNAIKEALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSEQDKRLEKLFLGLRCVLGVEL 305


>gi|207092325|ref|ZP_03240112.1| coproporphyrinogen III oxidase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 345

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 156/324 (48%), Gaps = 22/324 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I SIF GGG
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLRHALSQTDEP--IESIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS
Sbjct: 60  TPNTLSVESFERIFESIHHHANLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L FL R H  + A     + ++    +S DLIY  P       + EL+ A    +
Sbjct: 120 FREDKLLFLERQHPKNIAPVIETILKSGIENVSIDLIYNTPLDDENSLKEELKIAKELPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y L++EK T   K  K      PS     +  N+ +          YE+SN++  
Sbjct: 180 NHLSAYALSVEKNTNLEKNAKK-----PS---CTNFDNVIKEALEGFSFKQYEVSNYA-R 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  HNL YW   DY+G G GA   V          IE + +  LK          + E
Sbjct: 231 NYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVE 281

Query: 320 FLSSEQQADEFLMMGLRLREGISV 343
            LS + +  E L +GLR   G+ +
Sbjct: 282 TLSDQDKRLEKLFLGLRCVLGVEL 305


>gi|225164663|ref|ZP_03726903.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
 gi|224800722|gb|EEG19078.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
          Length = 311

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 143/291 (49%), Gaps = 28/291 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRS 70
           Q   SLG+Y+H PFC + C +C F       +    +++Q+   E   ++W       + 
Sbjct: 12  QNGGSLGLYIHVPFCARTCDFCAFYQESPTAQ-SIRDYLQTLPREAALVEW------DQP 64

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKN---------------WTVSSNVEITIEANPS 115
           IS+IFFGGGTP L+ P+++   L GI  +                T +S  E ++E  P 
Sbjct: 65  ISTIFFGGGTPGLLSPRDLD-TLCGIVHDICERAAHAASPPPPAATPTSPAEWSVEMAPG 123

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
           SV        R AGV RIS+G QS +   L  LGR H   +   A    R   F  ++ D
Sbjct: 124 SVTTERLAVLRDAGVTRISMGAQSFQPALLDALGRQHTREQVFRAYDRVRAAGFASVNID 183

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +++ALP Q  T W  +L++A++ A DHLS Y LT E+ T  +       + L  E+ A  
Sbjct: 184 MMFALPGQDETAWIADLEQAIALAPDHLSTYCLTFEEDTKLWVKLSQSKVKLDPEHEA-R 242

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
           LY  T +  +  G   YEISN +  G   LHNLN WR   + G+GP A S+
Sbjct: 243 LYETTWARLAQAGYAQYEISNFARPGHACLHNLNTWRMHTWAGLGPAAASQ 293


>gi|257437829|ref|ZP_05613584.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii A2-165]
 gi|257199752|gb|EEU98036.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii A2-165]
          Length = 331

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 169/347 (48%), Gaps = 25/347 (7%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           ++ + L E+        P    +I+FGGGTPSL+ P + A +          +   EIT+
Sbjct: 5   YVDALLRELARFAP-EAPLHPDTIYFGGGTPSLLSPADAARL----IAAAAPAPGAEITL 59

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FP 169
           EANP +V      G+R+AGVNRIS GVQS  +  L+ LGR H A +A AA   AR   F 
Sbjct: 60  EANPETVTEQTLCGFREAGVNRISFGVQSARDSQLKTLGRPHTARQARAAFAAARRAGFT 119

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            +S D++ ALP  T  +++  L+        H+S Y L IE  + F +   +G   LPS 
Sbjct: 120 NISGDIMLALPHYTQAEFDETLELIAEGGATHISAYLLKIEPDSAFGRHPPEG---LPSP 176

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
           + A D Y         HG   YEISN +  G E  HNL YW  GDY+G+GP AHS   +G
Sbjct: 177 DEAADFYLYAVEHLEHHGYRQYEISNFAKPGYEGRHNLIYWDCGDYLGLGPAAHS--CMG 234

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             R       +P      +      V++         A+++L++ LRLR+G+ +  ++  
Sbjct: 235 GRRF-----YYPSDTEAFLNDKAAPVMD-----GGCGAEDYLILQLRLRKGLDLAAYKAR 284

Query: 350 AGRNLD---IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G+      +   +N  + G+      S L  T  G+ + +S++A L
Sbjct: 285 YGKEFSTAQLAFVKNCVKSGYA-TFDGSTLALTPAGLIVQNSILAEL 330


>gi|332295055|ref|YP_004436978.1| HemN domain protein [Thermodesulfobium narugense DSM 14796]
 gi|332178158|gb|AEE13847.1| HemN domain protein [Thermodesulfobium narugense DSM 14796]
          Length = 375

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 192/399 (48%), Gaps = 36/399 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ 60
           K +S + ++      NSLG+Y+H PFC K+C YC F S  R  K  Q E F ++ L E++
Sbjct: 3   KKISYFLDDFELNDDNSLGIYIHVPFCEKRCNYCHFFS--RALKPNQIEKFFEALLFEIE 60

Query: 61  WM----RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
           +     R L     + SI+FGGGTPS+++P+ +  ++  +   + +  N EIT+EA+P S
Sbjct: 61  YYEKIDRNLFERTFVDSIYFGGGTPSIVKPELLKSLIKILDSKFNL-KNPEITLEAHPKS 119

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR-NHNASEAIAAIHLARNIFPRMSFDL 175
             V N++       NR+SLGV S EE+ L  L R N   S  I A  L       ++ DL
Sbjct: 120 F-VENYRDKNDLFFNRLSLGVVSFEEKELLSLSRENFGYSALILAKELG---IENVNVDL 175

Query: 176 IYALPKQTMTQWEMELQRALSYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +  +P Q +  ++  L     +  V  +S+Y L             + D V P E + ++
Sbjct: 176 LIGIPGQNLISFKKSLNIVCQFDNVKGISIYPL-------------EADFVEPDE-IVLE 221

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           L + ++      G   YEI+N +       HNL YW+Y +++  GP + S  K+G  R  
Sbjct: 222 LMSYSEEYLDKMGYLRYEIANWAKSDFFCRHNLKYWKYMNFLSFGPSSSS--KIGKRRFK 279

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            S      S L        ++ E   LS +    E +MMG RL EGI V + +      L
Sbjct: 280 RS------SNLDDYLDKKFSLEEDIELSEKDLFFEKIMMGFRLMEGIKVSELKNKFDERL 333

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +    +++   + +++  R+  T++G+  +++ +  L
Sbjct: 334 VEDFLIKIKKFDELVKIEKDRVFLTRKGIIFMNNFLVEL 372


>gi|325474037|gb|EGC77225.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           denticola F0402]
          Length = 390

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 178/366 (48%), Gaps = 38/366 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS---SI 74
           G+Y+H PFC++KC YCDF S    R+K      +  F+  +    ++   + SI+   ++
Sbjct: 5   GLYIHIPFCLQKCNYCDFFSVRAGRFKNILSGHLSPFVLRLAEDIKIQADKYSINEWDTV 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+ P ++  +   I      + + E T+E NP  +  +        G+NR S
Sbjct: 65  YIGGGTPSLLSPDDLYYLSSQIPAAQK-NPHREFTVEINPEDLTKDFLSAAVSGGINRFS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL ++ L    R      +++A+ L R+     +S DLI  L KQT    + ++Q 
Sbjct: 124 VGIQSLNDEVLSACKRRGCRKMSLSALELLRSQKGLILSCDLIAGLDKQTSDILKDDIQT 183

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L +  +H SLY L      +  +  KD ++         +L++  + I   +  + YE+
Sbjct: 184 LLHFKPEHFSLYALC---SNIKVRPEKDDEIA--------ELWSYGKDILEKNSYNKYEV 232

Query: 254 SNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRV-----KVGSHRVA----ISIEKHPES 303
           SN S+    +S+HN  YWR  DYIG+GPGA   +      + SH  A     S  K+ E 
Sbjct: 233 SNFSYKNLYKSIHNEKYWRLEDYIGVGPGAFGSIFFDKDALPSHAHANALRFSAIKNIEK 292

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV--------KDWEMLAGRNLD 355
           W  M  KN   V E E +  ++  +E  MMGLRL EGI          KD  + AG+ + 
Sbjct: 293 W--MTLKNRDEVYEYETIDEKEFIEEAFMMGLRLTEGIDRSFFKSRFGKDISVFAGKTIS 350

Query: 356 IECERN 361
              +RN
Sbjct: 351 KWLDRN 356


>gi|157363704|ref|YP_001470471.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga lettingae TMO]
 gi|157314308|gb|ABV33407.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga lettingae TMO]
          Length = 367

 Score =  149 bits (375), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 161/336 (47%), Gaps = 39/336 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ +G+YVH PFC  +C YCDF S+     V  E++ +S L E+    Q  G  S++SI+
Sbjct: 4   SDYIGLYVHIPFCKDRCNYCDFVSYTDFSLV--EDYFESLLKEITIWSQYVGKVSLNSIY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I  + +    D I+K++ +  + EIT+E NP   +   F   R  GVNRIS+
Sbjct: 62  VGGGTPSDIPLKYLEKTFDTISKSFNLC-DPEITVEINP---KFRYFYELRNLGVNRISM 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT-MTQWEMELQRA 194
           G+Q+ ++  L+ + R H+ SE       A N F  ++ D I  LP ++  T W   L+  
Sbjct: 118 GLQAADDTVLKAVNRRHSVSEFRETCREAMNYFENINIDFIIGLPFESEQTIWN-NLKVI 176

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             Y   H+S+Y L  ++  L              ++   D +    S    +G   YEIS
Sbjct: 177 NEYNPKHVSVYILESKQEFL-------------DQDTLADHHESFISALLENGYERYEIS 223

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIG--PGAHSRVK--VGSHRVAISIEKHPESWLKMVRK 310
           N ++ G    HNL YW   DYIGIG   G H  +K  V S  + + +E           K
Sbjct: 224 NFAYPGYRCKHNLKYWNNEDYIGIGVSAGGHIGLKRYVNSSNILLYME---------CLK 274

Query: 311 NGHAVVEKEFLSSEQQADEF---LMMGLRLREGISV 343
           NG      E+       DE    L MGLRL  GI +
Sbjct: 275 NGKFAF--EYFKENSPLDELKETLFMGLRLSNGIKI 308


>gi|312904055|ref|ZP_07763223.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0635]
 gi|310632531|gb|EFQ15814.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0635]
          Length = 289

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 11/286 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIF 168
           +EANP  +     Q  +  GVNR+S+GVQ+ +++ L+ +GR H A++    +  L +  F
Sbjct: 1   MEANPGDLTQEKLQVMKNYGVNRLSMGVQTFDDRLLKKIGRKHTAADVYETMKFLEKENF 60

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             +S DLIYALP QT+  +   L RAL+  + H SLY L +E  T+F    + G L LP 
Sbjct: 61  TNVSIDLIYALPGQTLESFRDALTRALALDLPHYSLYSLILENKTMFMNWVRQGRLQLPE 120

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           E +   +++ T       G H YE+SN +  G ES HNL YW    Y G G GA   +  
Sbjct: 121 EEIEAQMFDETIEAMEKKGRHQYEVSNFALTGKESQHNLAYWNNDHYYGFGAGASGYLGQ 180

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
             ++    I    + +LK +R+N   +VE E L+   Q +E L +GLR + GIS + ++ 
Sbjct: 181 TRYKNHGPI----QHYLKPLRENQLPIVETEELTRLNQIEEELFLGLRKKVGISKQKFQQ 236

Query: 349 LAGRNLDI----ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                ++       +R ++ +  IE      LR T++G+ + ++V 
Sbjct: 237 KFQEPIEAIYGEVIQRLIKEELLIEEADI--LRLTKKGLFVGNNVF 280


>gi|187250477|ref|YP_001874959.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Elusimicrobium minutum Pei191]
 gi|186970637|gb|ACC97622.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Elusimicrobium minutum Pei191]
          Length = 365

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 18/326 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC F+S+  +  +  E +I + + EM   +         +++ GGGT
Sbjct: 4   IYIHIPFCAQKCFYCAFSSYPDKLSLSGE-YINALIKEMSGHKNFNA----QTLYIGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           PS++  +N+  +   + +N+  V + +E T EANP S+        +K G NR+S+G+QS
Sbjct: 59  PSVLSEENLEKLFKAVEENFGPVKNFLESTFEANPESLTEEKIILLKKYGFNRLSMGLQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ LGR H+    I +   AR++ F  ++ DLI   P Q +  ++ ++   L+  
Sbjct: 119 SNDDILKNLGRIHDRRMFIKSYSDARSMGFDNINIDLIAGCPSQNLENFKEDISFVLTLN 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y + I +GT F+K     +   P + +  ++     +         YEISN S 
Sbjct: 179 PEHFSVYGMEISEGTKFFK-----EGYAPDDALVKEMLLYAHNFLPKRAYSHYEISNFSK 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE- 317
            G ES+HN NYW  GDY+G+G  A   +          + K+  +  K     G  V + 
Sbjct: 234 HGFESVHNNNYWLGGDYLGLGCAAAGYLNGTRSSNTDDLNKYINNMEK-----GLGVKDF 288

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV 343
           +E L  +++  E  M+ LR  EG+ +
Sbjct: 289 EEKLEGKKKTGESAMIALRRLEGVKL 314


>gi|323452628|gb|EGB08501.1| hypothetical protein AURANDRAFT_37383 [Aureococcus anophagefferens]
          Length = 418

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 159/339 (46%), Gaps = 23/339 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSISSIF 75
           +YVH PFC ++C YCDF   V        +     ++     EM        P  + +++
Sbjct: 27  LYVHLPFCRRRCFYCDFPVVVAGEASATRDRATARYVDLLEHEMASWDARAAP--LDAVY 84

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EP +I  +LDG+     V+   E+TIE +P + +      Y  AGV R+SL
Sbjct: 85  LGGGTPSLVEPAHIRRLLDGVRGAVGVAEGAEVTIECDPGTFDAEKLAAYVAAGVTRVSL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
           GVQS ++  L   GR H  ++A+AA+   R        S DLI  LP      W   L  
Sbjct: 145 GVQSFDDGVLEAAGRAHRRADALAAVAAVRAADLPHGWSLDLISGLPGLDGGLWRDTLAE 204

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-------VLPSENVAVDLYNLTQSITSAH 246
           AL++   H+S Y L +E GT F + + D           LP E +A D+Y     +    
Sbjct: 205 ALAFEPPHVSSYDLQVEAGTAFGRWYDDDGAKPSPARPALPDEALAADMYRDASRLLRGA 264

Query: 247 GLHAYEISNHSFLGA-ESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           G   YEIS+++   A +++HN  YWR    ++ +G GA S           ++  + E+W
Sbjct: 265 GYWHYEISSYARTPARKAVHNALYWRPRASWLALGLGATSSAGGDRFTRPRAMADY-EAW 323

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +      G AV E +         + L+ GLR  +G+ +
Sbjct: 324 V----AGGAAVGESDESDGADWLLDELLTGLRTSDGVDL 358


>gi|108563593|ref|YP_627909.1| coproporphyrinogen III oxidase [Helicobacter pylori HPAG1]
 gi|107837366|gb|ABF85235.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori HPAG1]
          Length = 352

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 159/330 (48%), Gaps = 22/330 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS 73
           G  ++ +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++  + Q   P  I S
Sbjct: 4   GEINMILYIHIPFCENKCGYCAFNSYENKHGLKEE-YTQALCLDLKHALNQTDEP--IES 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTP+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+
Sbjct: 61  VFIGGGTPNTLSVESFERIFESIHHHANLSMDCEITTEANPELITKAWCQGLKDLGINRL 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS  E  L FL R H+ +       + ++    +S DLIY  P       + EL+ 
Sbjct: 121 SLGVQSFREDKLLFLERQHSKNIVPVIETILKSGIENISIDLIYNTPLDNENSLKEELKL 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A    ++HLS Y L+IEK T   K  K      PS     +  N+ +          YE+
Sbjct: 181 AKELPINHLSAYALSIEKNTNLEKNAKK-----PS---YTNFDNVVRETLEGFSFKQYEV 232

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++    +  HNL YW   DY+G G GA   V          IE + +  LK       
Sbjct: 233 SNYA-RNYQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR------ 285

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              + E L+ + +  E L +GLR   G+ +
Sbjct: 286 ---QVETLNKQDKRLEKLFLGLRCVLGVEL 312


>gi|268680003|ref|YP_003304434.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268618034|gb|ACZ12399.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 351

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 161/327 (49%), Gaps = 28/327 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y+H PFC  KCPYC FNS+  + K+ Q   +  I+    E++      G   I+S+F G
Sbjct: 3   AYMHIPFCDSKCPYCAFNSYTNQSKLKQTYMQRLIEQLRFELEKFNVQKG--EINSLFIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS I     A + + ++    +S   E+T EANP S       G ++ G+NR+S GV
Sbjct: 61  GGTPSTIPASWYAPLFEMLSP--YLSKEAELTSEANPHSATQAWIAGMKELGINRLSFGV 118

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+FLGRNH+   A  AI  A ++    +S DL+Y     T      +L+ A  
Sbjct: 119 QSFNTEKLQFLGRNHSPKMAEEAIINAHHLGIQNISLDLMYGTALDTPHLLREDLKYARM 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             ++HLS Y LT+E+ T FY        V+ SE      +   Q I  A G   YEISN 
Sbjct: 179 LPINHLSAYALTLEEETPFYTQKN----VINSEEALARTF--VQEIIDA-GFPQYEISN- 230

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISIEKHPESWLKMVRKNGHAV 315
            F   ES HN  YW + DY+G+G GA     VG  H       K  E +L   +   +  
Sbjct: 231 -FGSYESYHNKGYWEHQDYLGLGAGA-----VGFLHHQRFYPAKKVEDYL---QNPCYQA 281

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGIS 342
           +E+  LS E+   E + +GLR   GI 
Sbjct: 282 IEE--LSIEELHVEKIFLGLRSCVGID 306


>gi|90423137|ref|YP_531507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris BisB18]
 gi|90105151|gb|ABD87188.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB18]
          Length = 387

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 5/273 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSI 74
           N   +Y+H PFC   C +C F    +  K   + F  + L E+    Q       ++ SI
Sbjct: 9   NHYSLYLHVPFCRAICTFCTFE-RTQYSKSSMDAFFDALLDEVDLREQSDDFTQATLDSI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGT SL+  + I+  L  +   + +  ++E T+E  P +   ++F+  R AGVNR+S
Sbjct: 68  YLGGGTASLLSNEQISQFLGRLRSGFGLHDDIECTLECEPGTKREDDFREVRDAGVNRVS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS  +Q L  L R H  + +   I  A N  F  +  DL+Y LP QT+  W+  +  
Sbjct: 128 IGVQSFSDQLLPALNRRHTVATSYRTIEAAHNAGFSNIHIDLMYGLPNQTLADWKFSVNE 187

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSAHGLHAYE 252
           A+   + H+S+Y+L I +  L  +    G+L  P++   + ++         A+GL  Y 
Sbjct: 188 AIRLGIQHVSVYRLIIFQDELLARKLGQGELQPPADAGTIEEMRRYALETLPANGLRQYS 247

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
           ++  +  G E ++    W   DY+G GP A+SR
Sbjct: 248 LTEFAKPGNECIYVQRNWDGSDYLGFGPAAYSR 280


>gi|327385789|gb|AEA57263.1| Oxygen-independent coproporphyrinogen III oxidase [Lactobacillus
           casei BD-II]
          Length = 308

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 146/294 (49%), Gaps = 10/294 (3%)

Query: 107 EITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           E T EANP+ +      Q     GVNR+S+GVQS  +  LR +GR H A +   AI  AR
Sbjct: 15  EFTFEANPNDLLTTEKLQVLHDYGVNRLSIGVQSFNDDVLRRIGRIHRAKDVYTAIANAR 74

Query: 166 NI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            + F  +S DLI+ LP Q+   +   LQ+AL+  + H S Y L +E+ T+FY + + G L
Sbjct: 75  QVGFDNISIDLIFRLPDQSRDDFLTSLQKALALDLPHYSTYSLILERKTIFYNLMRQGKL 134

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            LP+++V  D+Y     +  AHG H YEISN +  G +  HNL YWR   Y G G GA  
Sbjct: 135 RLPTQDVEADMYQDAIDLMEAHGRHQYEISNFAKDGYQCEHNLLYWRNDKYFGFGAGAFG 194

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +    +     I++    +L  +  +   V+E   +   +Q +E + +GLR  +G+S  
Sbjct: 195 YLGRDRYHNYGPIKQ----YLTPLHADHLPVLEHHLVPQSEQIEEEMFLGLRTMQGVSEA 250

Query: 345 DWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +       +D    E    L  QG + R Q   +R T +G  + + V     +
Sbjct: 251 RFYDRYHMTVDAIYGETVPELVSQGLVVR-QDGYIRLTNKGKFLGNEVFQRFLI 303


>gi|261880419|ref|ZP_06006846.1| coproporphyrinogen dehydrogenase [Prevotella bergensis DSM 17361]
 gi|270332887|gb|EFA43673.1| coproporphyrinogen dehydrogenase [Prevotella bergensis DSM 17361]
          Length = 326

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 13/325 (4%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I +I+ GGGTPS +  +N+  +   I + + V  + E+T+E NP  + +  F       V
Sbjct: 10  IQTIYLGGGTPSQLSHENLLKLFTHIYEVYNVDRDAEVTMECNPDDISMGMFD---DLPV 66

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQS  +  L+FL R H ASEA  A  + R      +S DL++  P++T++ WE 
Sbjct: 67  NRVSMGVQSFSDSRLKFLHRRHTASEADRAFGMLREQGITNISIDLMFGFPEETLSDWES 126

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +++ AL  A +H+S Y L  E+GT  Y++ K G +   +E +++ +Y+      +  G  
Sbjct: 127 DIEHALKLAPEHISAYGLMYEEGTPLYQLLKQGKVGEINEELSLAMYDALIDRLTMAGYE 186

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMV 308
            YEISN    G  S HN  YWR   YIG+G  AHS  +   S  +A  I+ +    +K  
Sbjct: 187 HYEISNFCKQGYRSEHNSGYWRGVPYIGLGAAAHSYDINTRSWNIA-DIKTYITETMK-- 243

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
              G    E E +    + ++ +   LR +EG+ +      A R   ++  +   + G +
Sbjct: 244 ---GVLPCEVEVIDDNTRYNDMVTTALRTKEGLDLNSLTP-AYRQFLMDNAKPYLKDGLL 299

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANL 393
             +    L  T+ G+ + ++V+++L
Sbjct: 300 -VLDGHYLHLTRSGIMLSNTVMSDL 323


>gi|160901693|ref|YP_001567274.1| oxygen-independent coproporphyrinogen III oxidase [Petrotoga
           mobilis SJ95]
 gi|160359337|gb|ABX30951.1| oxygen-independent coproporphyrinogen III oxidase [Petrotoga
           mobilis SJ95]
          Length = 380

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 153/332 (46%), Gaps = 14/332 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            SN + VY+H PFCVK+C YCD+ S        +  +  +   E+    +    R + +I
Sbjct: 2   NSNDIAVYLHIPFCVKRCLYCDYVSTTDL--SLKAKYFNALSKEIALKGEKLKGRKVRTI 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS +E + I      + ++  +S   E TIE NP SV     Q Y++ G+NRIS
Sbjct: 60  YFGGGTPSFVEEEFILQTFRSLQEHMDLSDLEEFTIEVNPESVNEKKVQFYKEIGINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G QS  ++ L+ +GR+H+ ++ + +  L  + +  ++ D I  LP +        L+  
Sbjct: 120 MGFQSTSDKILKTVGRSHDFNKGLESYKLLTSFYDNINIDFIVGLPYENFETVNSNLEFI 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                 H+S Y L     T      +  ++ LP +++  DL +           + YEIS
Sbjct: 180 EKMKPSHISYYLLDSSHDTPLKHFLEIKEMKLPEDDLVYDLLDYIYDQLKKLQYNRYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRK 310
           + S    E +HN  YW   DY+G G  A   +     V +  V   I K     L    K
Sbjct: 240 SWSLPQKECIHNQFYWYNLDYVGFGVSAGGHINNERYVNTSDVKAYITKLNNEELPYDTK 299

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           N +     EF     +  E L M LRL +GI+
Sbjct: 300 NAN----DEF----AELLETLFMSLRLTKGIT 323


>gi|242309139|ref|ZP_04808294.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
 gi|239524180|gb|EEQ64046.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
          Length = 349

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 162/327 (49%), Gaps = 27/327 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS   +  + +  ++Q    ++       G   I+S++ GGGT
Sbjct: 1   MYLHIPFCDSKCGYCAFNSKTNKNHL-KHQYMQRLCDDLAEQLAFYGVSKITSVYIGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++E      I + +     +  N E+ IEANP+S+ +   +  +  GVNR+SLGVQS 
Sbjct: 60  PSVVESSKYQRIFEILYP--FLEGNAEVNIEANPNSLTLEWMKNLKSFGVNRLSLGVQSF 117

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + LRFL R H       A+  A  +    +S DLIY  P       E E+Q A    +
Sbjct: 118 FAEKLRFLERIHREVSIYEAMENALKVGLENISIDLIYGTPFCAKEILEQEVQMASKLPI 177

Query: 200 DHLSLYQLTIEKGTLFYKMHK---DGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +H+S YQL+I++G+ F+   K    G+    PS      + +  +      G   YE+SN
Sbjct: 178 NHISAYQLSIDEGSRFFVQQKREFSGEFEGYPS------MGHFMKECLGQQGFVQYEVSN 231

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++  G  S HNL YW   +Y+GIG GA   +  + ++ V        E +LK   K+G  
Sbjct: 232 YA-RGYYSKHNLGYWEQKEYLGIGAGAVGCINGIRTYGVC-----EIEDYLK--GKSG-- 281

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGI 341
             ++E L S+    E L +GLR   G+
Sbjct: 282 --DREILKSKDIELEHLFLGLRSCVGV 306


>gi|42526974|ref|NP_972072.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
 gi|41817398|gb|AAS11983.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
          Length = 391

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 42/368 (11%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS---SI 74
           G+Y+H PFC++KC YCDF S    R+K      +  F+  +    ++   + SI+   ++
Sbjct: 6   GLYIHIPFCLQKCNYCDFFSVRAGRFKNILSGHLSPFVLRLAEDIKIQADKYSINEWDTV 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+ P ++  +   I      + + E T+E NP  +  +        G+NR S
Sbjct: 66  YIGGGTPSLLSPDDLYYLSSQIPAAQK-NPHREFTVEINPEDLTKDFLSAAVSGGINRFS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL ++ L    R      +++A+ L R+     +S DLI  L KQ++   + ++Q 
Sbjct: 125 VGIQSLNDEVLSACKRRGCRKMSLSALELLRSQKGLILSCDLIAGLNKQSLGILKDDIQT 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE--NVAVDLYNLTQSITSAHGLHAY 251
            L +  +H SLY L               +  LP E  +   +L++  + I   +  + Y
Sbjct: 185 LLHFKPEHFSLYALC-------------SNTKLPPEKDDEIAELWSYGKDILEKNSYNKY 231

Query: 252 EISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRV-------KVGSHRVAI--SIEKHP 301
           E+SN S+    +S+HN  YWR  DYIG+GPGA   +          +H  A+  S  K+ 
Sbjct: 232 EVSNFSYKNLYKSIHNEKYWRLEDYIGVGPGAFGSIFFDRKVLHANAHANALRFSAIKNI 291

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV--------KDWEMLAGRN 353
           E W  M  KN   V E E +  ++  +E  MMGLRL EGI          KD  + AG+ 
Sbjct: 292 EKW--MTLKNRDEVYEYETIDEKEFIEEAFMMGLRLTEGIDRSFFKSRFGKDISVFAGKT 349

Query: 354 LDIECERN 361
           +    +RN
Sbjct: 350 ISKWLDRN 357


>gi|281424410|ref|ZP_06255323.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella oris F0302]
 gi|281401679|gb|EFB32510.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella oris F0302]
          Length = 350

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 149/290 (51%), Gaps = 7/290 (2%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNF 122
           Q     +I++I+ GGGTPS++    +  IL  I K W    ++ E+TIE NP  V     
Sbjct: 17  QADTENTITTIYLGGGTPSMLSGNQLEQILLYIYKVWGKHIDLRELTIECNPDDVTEAFA 76

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
                  VNR+S+G Q+     LRFL R HN  E + A++  R++    +S DL++  P+
Sbjct: 77  ARLATLNVNRVSMGAQTFNNNRLRFLHRRHNREEIMQAVNRLRHVGIKNISIDLMFGFPE 136

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +TM +W+  LQ A+   V+H+S Y L  E+GT  + M +   +    E  ++ +Y +  +
Sbjct: 137 ETMEEWQTNLQEAIKLNVEHISAYSLMYEEGTPLFHMKQKKKIKDIDEETSLAMYEMLIN 196

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
             +  G   YEISN +  G  SLHN +YW    YIG+G  AHS    G+ +  IS  K  
Sbjct: 197 QLTKAGYEHYEISNFARPGYRSLHNSSYWHEVPYIGLGASAHS-YGHGTRKWNISNIK-- 253

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +++  V  N     E E L+   Q ++ +   LR REGI + +++   G
Sbjct: 254 -TYMDSVACN-RLPYEIEILNQNMQYNDLITTALRTREGIDLTNFKRKYG 301


>gi|315637174|ref|ZP_07892396.1| coproporphyrinogen III oxidase [Arcobacter butzleri JV22]
 gi|315478541|gb|EFU69252.1| coproporphyrinogen III oxidase [Arcobacter butzleri JV22]
          Length = 325

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 157/289 (54%), Gaps = 18/289 (6%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + I ++F GGGTPS I+      I + I  N  +   VEIT EANP+S      +  +  
Sbjct: 21  KKIETVFIGGGTPSTIKAFEYKEIFEII--NPYLEEKVEITTEANPNSASFEWLENMKSL 78

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GV+R+S GVQS + + L+FLGR+HN++ AI AI  A  I F  ++ D+IY +   T+   
Sbjct: 79  GVSRVSFGVQSFQNEKLKFLGRSHNSNSAIKAIQNASQIGFKEINCDIIYGVKNDTLNSI 138

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +L  A S  + H+S Y LTIE+GT F+K+ K+  + +  E+++ ++++      S +G
Sbjct: 139 KEDLDIAFSLPITHISAYSLTIEEGTKFFKLDKNS-VKIDDEDLSYEIFDY----FSKNG 193

Query: 248 LHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
              YEISN S    ++S HN  YW++ +Y+G+G GA   +         ++E++ ++ L 
Sbjct: 194 FTQYEISNFSRNKNSQSKHNYGYWQHKEYLGVGAGAVGYINKRREYPLKNLEEYIKNPL- 252

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                    VE E +  +    E +++G R   G+ ++ ++    + +D
Sbjct: 253 --------FVEIEEIDEDDVKVEKVLLGFRCLNGVELELFDEKELKKID 293


>gi|118475057|ref|YP_892276.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414283|gb|ABK82703.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 346

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 38/349 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KCPYC F SH  ++ + +  F  S L        L   + IS+IF GGGT
Sbjct: 3   IYIHIPFCESKCPYCAFGSHSDKFSLTKRYF--SALKSEIKESILNLNKKISTIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +E    + I + I     ++ N EIT EANP+S  +      R+ GVNR+S G QS 
Sbjct: 61  PSSVEAGFYSDIFEIIKP--KLAKNCEITTEANPNSASLKWLLEMRELGVNRVSFGAQSF 118

Query: 141 EEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            E+ L+ LGR H+    S+A+    +A+  F  ++ DL+Y     T      E++   + 
Sbjct: 119 NEKKLKLLGRIHSKNGISKAVQNAKIAK--FNNINIDLMYGTKLDTKKLILTEVENIFNL 176

Query: 198 AVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + H+S Y L +E+ T F++   + KD   +  ++ +  +L N+        G   YEIS
Sbjct: 177 NISHVSAYSLMLEENTPFFERINLKKDSPAL--AKFMIQELENI--------GHKQYEIS 226

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G   LHN+ YW+  DY+G   GA++   +G  R   +   + E+++K        
Sbjct: 227 N---FGKPCLHNIGYWKQKDYLGF--GAYAVGTIGEKRFYST--PNLEAYIK-------N 272

Query: 315 VVEK--EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            +EK  E LS   + +E + +GLR   G+ + +   L  +  +I  ++N
Sbjct: 273 PLEKSVENLSKNDKLNEHIFLGLRSIVGVKISNLNDLQLQKANILAKKN 321


>gi|266625955|ref|ZP_06118890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
 gi|288862145|gb|EFC94443.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
          Length = 291

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 126/239 (52%), Gaps = 19/239 (7%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           +    L E++          I +IF GGGTPS+++  +I  I+  + +++ ++ + E+TI
Sbjct: 6   YTDKLLEEIRIQSSFVREYQIDTIFLGGGTPSILDAADITAIMGALKEHYDIAPDAEVTI 65

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FP 169
           E NP +V++     YR+AG+NR+S+G+QS ++  LR+LGR H   E + +    R   F 
Sbjct: 66  EVNPGTVKMEGLAAYREAGINRVSMGLQSADDTELRYLGRIHTYDEFLKSFQRVRMAGFT 125

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF------------YK 217
            ++ DLI A+P QT   W   L++      +H+S Y L +E+GT +            Y+
Sbjct: 126 NVNVDLISAIPGQTPESWRNTLKKTAMLKPEHISAYSLIVEEGTPYYDRYGGHVEMEGYE 185

Query: 218 MHKDGDLV------LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW 270
           M  +   +      LP E+   ++Y +T++     G   YEISN++  G E  HN+ YW
Sbjct: 186 MSPEERRILMALPDLPDEDTEREMYYMTRNCLGEQGYERYEISNYARPGFECRHNVGYW 244


>gi|302335761|ref|YP_003800968.1| Coproporphyrinogen dehydrogenase [Olsenella uli DSM 7084]
 gi|301319601|gb|ADK68088.1| Coproporphyrinogen dehydrogenase [Olsenella uli DSM 7084]
          Length = 427

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 155/343 (45%), Gaps = 30/343 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YVH PFC  KCPYCDF S    R       ++   L +   +R +       + + GGG
Sbjct: 26  LYVHIPFCAHKCPYCDFASRATARNDARMLPYLGKILEQYSELRSVGLLEGCDTAYVGGG 85

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP ++    + L L  I +  T+S   E ++EANP S+  +      +  + R+SLGVQS
Sbjct: 86  TPPMLGGGLVDLSL-AIGELGTLS---EFSMEANPESLPADLVGELAQTPLTRVSLGVQS 141

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L  LGR H A +A+AA+    +    +S DL+ A+P Q+   W   L   LS   
Sbjct: 142 TDDVELAALGRTHGARDALAAVESVASSGLAVSCDLMCAIPHQSDATWRRSLADVLSAGA 201

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S+Y L+IE+ T F   +         E V      +     +A GL  YE+++++  
Sbjct: 202 THVSVYPLSIEEKTPFGARYAGTRPDFNDEAVQARRMEIACDALAAAGLRRYEVASYARP 261

Query: 260 GAESLHNLNYWRYGDYIGIG---PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           G E  HN  YW    Y+GIG    G   R    S R A      P   +  VR     VV
Sbjct: 262 GRECRHNQTYWEGRSYLGIGVAAAGMLDRTGYESLRRACPQLPVPLPGIARVRL----VV 317

Query: 317 EKE---FLSSEQQAD---------------EFLMMGLRLREGI 341
           + +   FL+S   AD               E LM+G RL  GI
Sbjct: 318 KDDLDAFLASSSCADLHFSGEMLTERQAVAEDLMLGARLARGI 360


>gi|260891127|ref|ZP_05902390.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
 gi|260859154|gb|EEX73654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
          Length = 463

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 137/250 (54%), Gaps = 10/250 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF + VR  K  ++ ++   + E++   +        +I+FGGG
Sbjct: 11  AIYIHIPFCDKKCEYCDFCTFVRMEKEYRK-YVDYLIREIRMYPKF----KYDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  I+D +  +WT   N EIT+E NP+ + +   +  R+ G+NR+S+G+QS
Sbjct: 66  TPSLLPVGMIKEIMDEL--DWT--GNAEITLELNPTDMTLEKLKEIREIGINRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L F+GR H++ +A+    +AR   F  ++ DL++ +P Q++   + +L       
Sbjct: 122 FQNHVLDFIGRQHSSDDAVNVYKMARKAGFNNITVDLMFGIPNQSIEDLQKDLNILKELK 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +++S+Y L  E+GT+F+   + G L    ++V   +Y +     + +G   YEISN + 
Sbjct: 182 PENVSIYSLIWEEGTVFWSKLQKGILSEIDQDVEAQMYEMIIEFFNENGYCHYEISNFAR 241

Query: 259 LGAESLHNLN 268
           +      N N
Sbjct: 242 IDENFEENRN 251


>gi|308233985|ref|ZP_07664722.1| Coproporphyrinogen dehydrogenase [Atopobium vaginae DSM 15829]
          Length = 424

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 25/358 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQW 61
           ++ AY+  +  +  + L  Y+H PFC +KC YCDF S   +        +  +   ++  
Sbjct: 5   FMVAYKQRLADKDIHEL--YLHIPFCTQKCGYCDFASWPFKSTTSVPSEYAAALKGQLNE 62

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++         +++ GGGTPS + P  +  I++   +  T  +  E + E NP S   + 
Sbjct: 63  LKAANVCEDTETLYIGGGTPSAL-PHELPDIIECACE--TCPTLREKSCEVNPESACDDL 119

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
                + G+NR+S GVQS     L+ LGR H  + A+  +   + +   +S DL+ A+P 
Sbjct: 120 LSHMLRQGINRVSCGVQSTNADELKALGRTHTPARALERLCTLKAMGFSVSCDLMCAIPL 179

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   W   L   ++  VDH+S+Y LTIE+ T F+  +        SE V     ++   
Sbjct: 180 QTDDSWLKSLHDVINCKVDHVSIYPLTIEQSTAFWARYAHSHPKFNSEAVQAARMDIAHD 239

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH---------- 291
           +  ++G   YE S+++    +  HN  YW    YIG+GP A S +   ++          
Sbjct: 240 VLESYGYKRYETSSYAQPNEQCDHNCGYWSARTYIGLGPSAASMLTTHAYRRLKQVWKTL 299

Query: 292 --------RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                   RV I+      S+++  R +       EFL+  Q   E LM+  RL  GI
Sbjct: 300 PDLPSDIARVRITCTDSRASFIRNPRLSQRK-ASLEFLTLPQVLAEDLMLEARLARGI 356


>gi|158604993|gb|ABW74805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter concisus 13826]
          Length = 348

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 165/355 (46%), Gaps = 37/355 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           VY+H PFC  KCPYC F S    + KV    + ++   ++ +  +    + IS+IFFGGG
Sbjct: 3   VYIHVPFCQSKCPYCAFGSSDDEFSKVSA--YFKALCFDLNFQLKSQNVKEISTIFFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  +    I   +A   T     EIT EANP+S  +   +  +  G NRIS G QS
Sbjct: 61  TPSAVNAKFYDEIFSILAPLCT--PKTEITFEANPNSANLAWLKHVKNLGANRISFGAQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L+FLGR H+  +   A+  A    F  ++ DLIY     T  +   E +   S A
Sbjct: 119 FFEDKLKFLGRIHSREQIFKAVENAHAAGFKSINLDLIYDTKFDTKKRLLAETENLKSLA 178

Query: 199 VDHLSLYQLTIEKGTLF-----YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           + HLS Y LT+E+ T F     YK  KD D +            + + I  A G   YEI
Sbjct: 179 ITHLSAYSLTLEENTPFSGKKSYK--KDSDTLAKF---------MIEQIGRA-GFKQYEI 226

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G    HNL YW+  +Y+G+G  +        +    SI+ +       + +  H
Sbjct: 227 SN---FGEICKHNLGYWQGKNYLGVGAFSVGFKDATRYYAKSSIDAY-------ITQPTH 276

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR--NLDIECERNLQRQG 366
              E+E LS  + A E + +GLR   G+          +  NL +E E+ L ++G
Sbjct: 277 R--EREILSPSELAREHIFLGLRSIVGVEAGRLNEAQKKRANLLVENEKLLFKEG 329


>gi|154148889|ref|YP_001406558.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
 gi|153804898|gb|ABS51905.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter hominis ATCC BAA-381]
          Length = 344

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 159/330 (48%), Gaps = 37/330 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S   ++ +  + F ++ + E+           IS++F GGGT
Sbjct: 3   IYIHIPFCESKCKYCAFGSFSDKFDLVNDYF-KALVLEIS---HFNFDEKISTLFIGGGT 58

Query: 81  PSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           PS++E +  A + + +    KN T     EI+IEANP+S  +   +  R  GVNRIS G 
Sbjct: 59  PSVVEAKFYAPVFEILRPHFKNLT-----EISIEANPNSANLKWLKEMRNLGVNRISFGA 113

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L+FLGR H+A +   A+  A+   F  ++ DLIY     T    + EL+   +
Sbjct: 114 QSFNDEKLKFLGRIHSAKQIENAVQNAKIAGFDNINIDLIYDTKFDTKDNLKFELKNISN 173

Query: 197 YAVDHLSLYQLTIEKGTLFY--KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             + H+S Y L +EKGT FY  K +K    VL          NL +      G   YEIS
Sbjct: 174 LKISHISAYSLILEKGTEFYGKKSYKKDSSVL----AGFLFKNLAEI-----GFKQYEIS 224

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G    HN +YW+  DY G G  A     VG+            S+LK   K    
Sbjct: 225 N---FGRICEHNFSYWKGEDYAGFGAYA-----VGTINKTRKTSPDLFSYLKNPLKKSIE 276

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++  + + +E+     +++G+R   G S K
Sbjct: 277 ILNDKDIKTER-----ILLGMRSSVGFSRK 301


>gi|149370093|ref|ZP_01889944.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [unidentified eubacterium SCB49]
 gi|149356584|gb|EDM45140.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [unidentified eubacterium SCB49]
          Length = 407

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 132/242 (54%), Gaps = 9/242 (3%)

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
           S VE    A  ++   N  + Y+  G+NR+S+G+QS  E+ L+ + R HNA+EA A IH+
Sbjct: 115 SAVEDQQSAQSNTALTNKLKSYKTVGINRLSIGIQSFFEEDLKLMNRAHNATEAAACIHI 174

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           A+  F  +S DLIY +PK T  +W   + +AL+  + HLS Y LT+E  T      K G 
Sbjct: 175 AKQYFKNISIDLIYGIPKMTNERWLENVDKALALEIPHLSCYALTVEPKTALENFIKKG- 233

Query: 224 LVLPSEN-VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           +V P E+ VA   ++L      A G   YE SN S  G ES +N  YW    Y+G+GP A
Sbjct: 234 IVPPVEDEVAQAHHSLLIERMEAAGFENYEFSNFSKPGWESQNNTAYWDGKSYLGVGPSA 293

Query: 283 HSRVKVG-SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           HS   V  S  +A     +   +LK +  +    +E+E LS   + +E++M GLR + G+
Sbjct: 294 HSYDGVQRSWNIA-----NNAIYLKKIAVD-ELPIERESLSKTDRYNEYVMTGLRTKAGV 347

Query: 342 SV 343
           S+
Sbjct: 348 SL 349


>gi|224373238|ref|YP_002607610.1| coproporphyrinogen III oxidase [Nautilia profundicola AmH]
 gi|223588423|gb|ACM92159.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nautilia profundicola AmH]
          Length = 365

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 159/335 (47%), Gaps = 28/335 (8%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +NN      NS  +Y+H PFC  KC YC FNS+     + ++ F      + Q++ ++  
Sbjct: 2   QNNSQFSTLNSQLLYIHIPFCDSKCNYCAFNSYTNINHLKKKYFDA---VKKQFLHEIDT 58

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                ++F GGGTPS +       +   I+ N  + +  EITIE NP++      +  + 
Sbjct: 59  NTEFETVFIGGGTPSTMSVDFYEKLFKLISPN--IKNAKEITIECNPNT-SYEWLKEIKN 115

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G+NRIS GVQ+  E+ L+FL RNH+ ++A+ AI  A+   F  ++ DLIY+    T   
Sbjct: 116 LGINRISFGVQTFNEEKLKFLNRNHSPTQAVKAIENAKKAGFENINLDLIYSTALDTKKL 175

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +L  A S  V H+S Y LTIE+ T +     + D      +  ++++ + +      
Sbjct: 176 LTKDLNTAFSLPVTHISAYSLTIEENTKW-----ENDFSKRKYDEELEIWFIEK---IKE 227

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE---- 302
               YEISN    G   LHNL YW   +Y GIG GA    K         IE++      
Sbjct: 228 KFSQYEISN---FGKPCLHNLGYWMGKEYFGIGSGAVGFKKWRMENGEWKIERYYTQNSV 284

Query: 303 -SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
             +LK   K  +     E+LS E    E + +GLR
Sbjct: 285 YEYLKHPTKYKY-----EYLSDEDIKKEKVFLGLR 314


>gi|285808468|gb|ADC35993.1| coproporphyrinogen III oxidase anaerobic [uncultured bacterium 148]
          Length = 409

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 161/362 (44%), Gaps = 52/362 (14%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-------------TG 67
           +Y+H PFCV  CPYCDF         G  N +  +L  ++   +L             T 
Sbjct: 14  LYIHVPFCVSLCPYCDFVVIAGSATRGPTNKVDRYLAALRRELELRADALDATFGLPGTA 73

Query: 68  PR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            R ++ S++ GGGTPS++  + IA +L+ +   + ++   E+T+EANP   E  +     
Sbjct: 74  ERPALESVYLGGGTPSIMPAEAIAALLERVRGRYGLADGAEVTLEANPGPDERGDPAALL 133

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
            AGVNRIS G QSL++  LR LGR H A     A+  AR   F  ++ DL+Y +P     
Sbjct: 134 AAGVNRISFGAQSLDDTELRRLGRRHRARHVAEAVANAREAGFSSINVDLLYDIPDTDHP 193

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKG---------------TLFYKMHKDGDLVLPSEN 230
            W   L R L  A +H SLY L ++                 T   +  +DG      E+
Sbjct: 194 TWMTTLDRVLEMAPEHCSLYALALDDPDAEGLTGPFGDHLPMTRGARRWRDGVRPGQDED 253

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
            A   Y+       A G   YEISN +  G ES HNL YW    +  +GPGAH       
Sbjct: 254 RAAAQYHHAVVTLGAAGYRGYEISNWAQPGHESRHNLAYWMRRPHEALGPGAH------- 306

Query: 291 HRVAISIEKHPESWLKMVRKNGH-AVVEKEFL--------SSEQQADEFLMMGLRLREGI 341
                + + H   W    R +G+ A VE   L            +A E L++ LRL  G+
Sbjct: 307 -----AFDGHRRRW-NAARLDGYLAAVESGALPPGGVAETDPADEAAEALILTLRLDSGV 360

Query: 342 SV 343
            +
Sbjct: 361 PL 362


>gi|328944006|ref|ZP_08241471.1| coproporphyrinogen dehydrogenase [Atopobium vaginae DSM 15829]
 gi|327491975|gb|EGF23749.1| coproporphyrinogen dehydrogenase [Atopobium vaginae DSM 15829]
          Length = 419

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 25/355 (7%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQ 64
           AY+  +  +  + L  Y+H PFC +KC YCDF S   +        +  +   ++  ++ 
Sbjct: 3   AYKQRLADKDIHEL--YLHIPFCTQKCGYCDFASWPFKSTTSVPSEYAAALKGQLNELKA 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                   +++ GGGTPS + P  +  I++   +  T  +  E + E NP S   +    
Sbjct: 61  ANVCEDTETLYIGGGTPSAL-PHELPDIIECACE--TCPTLREKSCEVNPESACDDLLSH 117

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
             + G+NR+S GVQS     L+ LGR H  + A+  +   + +   +S DL+ A+P QT 
Sbjct: 118 MLRQGINRVSCGVQSTNADELKALGRTHTPARALERLCTLKAMGFSVSCDLMCAIPLQTD 177

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L   ++  VDH+S+Y LTIE+ T F+  +        SE V     ++   +  
Sbjct: 178 DSWLKSLHDVINCKVDHVSIYPLTIEQSTAFWARYAHSHPKFNSEAVQAARMDIAHDVLE 237

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------------- 291
           ++G   YE S+++    +  HN  YW    YIG+GP A S +   ++             
Sbjct: 238 SYGYKRYETSSYAQPNEQCDHNCGYWSARTYIGLGPSAASMLTTHAYRRLKQVWKTLPDL 297

Query: 292 -----RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                RV I+      S+++  R +       EFL+  Q   E LM+  RL  GI
Sbjct: 298 PSDIARVRITCTDSRASFIRNPRLSQRK-ASLEFLTLPQVLAEDLMLEARLARGI 351


>gi|145501693|ref|XP_001436827.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403971|emb|CAK69430.1| unnamed protein product [Paramecium tetraurelia]
          Length = 375

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 176/340 (51%), Gaps = 31/340 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGP-------RS 70
           +  Y+H PFC+K+C YC F  H V + +V Q ++ QS   E Q++  L            
Sbjct: 1   MSAYIHIPFCLKRCFYCAFPVHIVGQTEVNQNHYKQSL--EKQYVEYLIKDIQKHYKGEP 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +I+FGGGTPSL+  +++ LIL+   K     SN EITIEA+P +   +  QG++  G+
Sbjct: 59  LKTIYFGGGTPSLLSLESLQLILNCFKK----QSNAEITIEADPKTFNEDKLQGFKTLGL 114

Query: 131 NRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           NR+S+GVQSL++++L+ L R+H   +  +A+  I+     F   SFD +Y LP +     
Sbjct: 115 NRLSVGVQSLQDETLKRLNRSHLRKDIDDALGLIYKVYGSFDNCSFDFLYNLPSEVGQSS 174

Query: 188 EMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             +L+  +  Y   H+S Y L+IE+ + FYK     + + P  N  +   N T+   +  
Sbjct: 175 LEDLKWFIEQYQPGHISAYSLSIEEESYFYKNLNYREGIHPLPNNEIQTCNYTKVHQTLQ 234

Query: 247 GLHAYEISNHSFLGAE---SLHNLNYWRYGD--YIGIGPGAHSRVKVGSHRVAISIEKHP 301
               YEISN  F  +E   S HN NYW  GD  + G G GA S     S+ + ++  K  
Sbjct: 235 QYDHYEISN--FAKSEKHISQHNKNYW-LGDSNFYGFGMGATSL----SNLIRVTRPKTL 287

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           + + + V      +VE E    E+Q    LM  LR + GI
Sbjct: 288 KQYYRFVDSGEGCLVEDESTQFEKQRI-LLMSRLRTKWGI 326


>gi|320530572|ref|ZP_08031628.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas artemidis F0399]
 gi|320137187|gb|EFW29113.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas artemidis F0399]
          Length = 357

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 146/278 (52%), Gaps = 10/278 (3%)

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           ++++FGGGTP+ +    +  +++ +       +  E+T+EANP +V+   F   R A VN
Sbjct: 35  ATVYFGGGTPTALPAHLLVGLIETL--RAAAGTPAELTVEANPGTVDEEYFAQLRAAEVN 92

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RISLGVQS ++  L  +GR H A EA AA   AR   F  +S DL+Y LP QT+   +  
Sbjct: 93  RISLGVQSFDDALLGRIGRIHTAEEARAAFRAARAAGFTNISIDLMYGLPGQTLHDLQES 152

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++  ++   +H+S+Y LT+E+GT F      G L LP E  A ++Y+   +   A G   
Sbjct: 153 VRAVIALVPEHISVYGLTVEEGTPFAAAQAAGRLDLPPEETAEEMYDYLMAELPARGYLR 212

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES HNL YWR   Y+G+G  AH  V      V    E+   ++++ V  
Sbjct: 213 YEISNFARRGFESRHNLGYWRSVPYLGVGAAAHGYVD----NVRWENERDTAAYIRRVMA 268

Query: 311 NGHAVVEKEFLSSEQQA--DEFLMMGLRLREGISVKDW 346
            G  V   E     + A  +E+  + LR   GI   D+
Sbjct: 269 -GEDVRRAEDGERTRTAAMEEYAFLALRTAAGIDETDF 305


>gi|319937617|ref|ZP_08012021.1| hypothetical protein HMPREF9488_02857 [Coprobacillus sp. 29_1]
 gi|319807259|gb|EFW03871.1| hypothetical protein HMPREF9488_02857 [Coprobacillus sp. 29_1]
          Length = 360

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 29/380 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDF   V       E ++ + + E+Q  +Q++G  +  +++ GGG
Sbjct: 3   SLYVHIPFCDHICAYCDF-CKVFYKTEWVEKYLDALVYEIQ-HKQISG--NYDTVYIGGG 58

Query: 80  TPS---LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           TPS   L++ Q +  IL    K        E TIE NP S++      +    +NR+S+G
Sbjct: 59  TPSSLNLLQLQKLFDILSPFTKCVK-----EFTIEVNPESMDQEKIDLFVNNSINRLSVG 113

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ +++ L  + R H + E I  I  A+      ++ DL+Y LP QT+     ++    
Sbjct: 114 VQTFQDKLLGAINRVHTSLETIEVIQQAQAKGITDINVDLMYGLPNQTLKDVYKDIDIVN 173

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S+Y L +E+ TL     K+ +     +      Y          G+  YE+SN
Sbjct: 174 SLDASHVSIYSLILEEHTLL----KNQNYQPLDDEEDAKWYQEINRYLETKGMIHYEVSN 229

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           + +    SLHNL YW Y DY GIG  AHS ++   HR+  +  K    +L     N   +
Sbjct: 230 Y-YKYKPSLHNLVYWHYEDYDGIGLSAHSLIQ--HHRLENT--KSLTQYL-----NHQYL 279

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            E   L    +  E +MMGLRL EG+ + +   +   +  I+ +  +Q+   ++ ++   
Sbjct: 280 SEDIILEPADELFEKIMMGLRLIEGLEINEVNQMFDIDFLIKYQEPIQKYLKLKMLEIKD 339

Query: 376 --LRCTQRGMTMLDSVIANL 393
             ++ T  GM  L+S++ + 
Sbjct: 340 GYIKTTSLGMNYLNSILIDF 359


>gi|307297233|ref|ZP_07577039.1| oxygen-independent coproporphyrinogen III oxidase [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306916493|gb|EFN46875.1| oxygen-independent coproporphyrinogen III oxidase [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 379

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 178/387 (45%), Gaps = 35/387 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +G+Y+H PFC ++C YCDF       + VR+Y    +  ++ +               + 
Sbjct: 3   MGLYIHIPFCARRCSYCDFCTVEYDGNLVRQYHDLLKKEVEMY----------PASERVE 52

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++FGGG+PSL   + +  ++  I+ ++  +  VE+TIEANP  + + N + +R  G NR
Sbjct: 53  TLYFGGGSPSLYPVELLRDLMSFISCSFDAAP-VEVTIEANPWELNLKNLKQWRDIGFNR 111

Query: 133 ISLGVQSLEEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +S+G+QS E + L    R    N  + + A   +R+IF  ++ D I  LP +  +     
Sbjct: 112 LSIGIQSSEREILERCDRPVPKNLRDRLMA---SRDIFENLNLDFILGLPGENESNVAGN 168

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+   +   DH+S Y    +  T   ++  D  + LP + +   L+++     S  G   
Sbjct: 169 LEMISAINPDHVSYYVFDSDHETKLMRLVHDDIIDLPRQEIVEGLHDIILDSLSKMGFSR 228

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH----RVAISIEKHPESWLK 306
           YEIS+      E LHNL YWR   Y+G G      V  GSH    R   + +     +L 
Sbjct: 229 YEISSWERGRRECLHNLKYWRNEQYMGFG------VSAGSHFDRKRYVNTSDLLEYRYLV 282

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +R+    V E    S  Q+  E L MGLRL EG+ +   E+    N  +  E       
Sbjct: 283 NLRR--RPVFELRENSVIQEVFETLFMGLRLMEGVDLSKLELPDELNNTLVSELRAHLGD 340

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++     SR+R    GM    SV+  L
Sbjct: 341 YLSPDN-SRIRLNDNGMDFSRSVLEKL 366


>gi|261416501|ref|YP_003250184.1| oxygen-independent coproporphyrinogen III oxidase [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261372957|gb|ACX75702.1| oxygen-independent coproporphyrinogen III oxidase [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302327291|gb|ADL26492.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 378

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 180/386 (46%), Gaps = 25/386 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDF-----NSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSIS 72
            G+Y+H PFC K C YCDF     N+ +    VG  E  I++F    +    L+  R++ 
Sbjct: 2   FGIYIHVPFCAKICDYCDFRVMPANARLFEEYVGLLEREIRAFNDTHRG--ALSQARTL- 58

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             + GGGTPS++    +  I   + +    V S  E+++E NP S    + Q     GV 
Sbjct: 59  --YLGGGTPSILPGACLERIFAVLTECGVRVESLDEVSMEFNPESCTEESVQMALSCGVR 116

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R SLG+Q+  +  L  +GR H       A+ L  ++   ++S DL++ LP Q++  +  +
Sbjct: 117 RFSLGLQTFSQTLLDRIGRRHTVERGFEALRLLTSLPQTKVSADLMFDLPGQSVDSFLSD 176

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + R   + + HLS Y L + + TL       G+  +  E++   +Y     I    G   
Sbjct: 177 VDRLSDFPLGHLSFYGLNVGERTLLGGRVSRGEEKI-DESLYEPMYLGGVEILEKKGFSR 235

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G ESLHN+NYW  G+YIG GPGAHS       R   + E +P  W   V  
Sbjct: 236 YEVSNFAKPGDESLHNMNYWNRGEYIGFGPGAHSYF---DGRRFCAPEMYPR-WRDYVNA 291

Query: 311 NG-HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGF 367
               A +  + L  +    E + + LR R G+   D   LA   + +  E      ++ F
Sbjct: 292 GSPDASLTYDDLDKDDVLTERVWLSLRQRSGL---DLNALAADGISVSPEGYEPWVKKDF 348

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
              +    L+   RG   +DSV+ ++
Sbjct: 349 -AMLDSGVLKLVGRGWIFMDSVVTDV 373


>gi|221194555|ref|ZP_03567612.1| coproporphyrinogen III oxidase [Atopobium rimae ATCC 49626]
 gi|221185459|gb|EEE17849.1| coproporphyrinogen III oxidase [Atopobium rimae ATCC 49626]
          Length = 426

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 155/348 (44%), Gaps = 36/348 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH--------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
            +YVH PFC  KC YCDF S         + RY+   E+ IQ           L      
Sbjct: 32  ALYVHIPFCAHKCVYCDFASWATASSDPLMARYEAAIESQIQEAYA-------LGLLEDC 84

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S + GGGTP+L+  +   L+    AK    +   E + EANP S+        + AG  
Sbjct: 85  QSAYVGGGTPTLLGAELGRLVSCIRAK----APIAEFSCEANPDSLTDEVLLVLKDAGTT 140

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RISLGVQS  +  L +LGR H+A +A      A ++   +S D++ AL  QT   W+  L
Sbjct: 141 RISLGVQSFCDAELLWLGRIHSAKQAFDRARAAASMGFDVSCDVMCALKGQTQKSWQQTL 200

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              L   VDH+S+Y L+IE+GT   K            +V        + I  A G   Y
Sbjct: 201 ATFLELDVDHVSVYPLSIEEGTPLAKQTAGAKTPWNGPDVQAGRMEEAEKILKAAGYARY 260

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH----RVAISIEKHPESWLKM 307
           E+++++       HNL+YW    YIG+G GA S +    +     +  S+ + P+   + 
Sbjct: 261 EVASYARNHKVCRHNLSYWTAQPYIGLGTGAASMLTREGYDKLCTIQTSLPQPPKDAFRA 320

Query: 308 VRKNGHA-------------VVEKEFLSSEQQADEFLMMGLRLREGIS 342
             K   A               + EFL   + A E LM+G RL +G+S
Sbjct: 321 RLKVCDARQSIAAGKTLADTSFDVEFLDVCEAAAEDLMLGARLTQGLS 368


>gi|331018491|gb|EGH98547.1| HemN family oxidoreductase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 199

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 1/166 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFGG
Sbjct: 32  LSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL     +  +L G+ +    +S++EIT+EANP + E   F  Y   G+NR+S+G+Q
Sbjct: 92  GTPSLFSADALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYHGLGINRLSIGIQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           S +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+
Sbjct: 152 SFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQS 197


>gi|242001348|ref|XP_002435317.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
 gi|215498647|gb|EEC08141.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
          Length = 177

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 108/175 (61%), Gaps = 5/175 (2%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN +V +  V     ++  + E   + +L G   +SS+FFGGGTPSL+
Sbjct: 1   WPYCEKRCTYCNFNKYVSQ-NVDHTGMMECLIREFTTIVELAGISQVSSVFFGGGTPSLM 59

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P +I  +L G+  + +    +E+T+E NP+       + +++AGV+R+S+G+Q L+++ 
Sbjct: 60  RPADIERLL-GVVSSLSPDPGLEVTLECNPTPAARQTLRDFKRAGVSRVSVGIQCLQDEE 118

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW--EMELQRALS 196
           L  LGR H + +A+  +  A  +FP R+S D++Y  P Q + QW  E+EL R L+
Sbjct: 119 LSRLGRTHTSKDALRCVEEAECLFPGRVSVDVLYGRPGQDLQQWLRELELVRVLN 173


>gi|325270270|ref|ZP_08136877.1| coproporphyrinogen dehydrogenase [Prevotella multiformis DSM 16608]
 gi|324987571|gb|EGC19547.1| coproporphyrinogen dehydrogenase [Prevotella multiformis DSM 16608]
          Length = 422

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 193/424 (45%), Gaps = 57/424 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWM---RQLTGPRSIS 72
           G+Y+H PFC  +C YC F S V   +VG    +E ++ +   EM+     R    P  +S
Sbjct: 3   GLYIHIPFCASRCIYCGFYSTVPSERVGARPVEERYVDALCHEMELKEGGRDGGAPAELS 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV-------------SSNVEITIEANPSSVEV 119
           SI+ GGGTPS +   ++  +   I + +               ++ +EIT+E NP  V V
Sbjct: 63  SIYLGGGTPSQLSFPSLQKLFRTIGRVYRTENRWGGGGGRSGSAAPMEITMECNPDDVTV 122

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +      VNRIS+G Q+  ++ LRFL R H A E   A+   R      +S DL++ 
Sbjct: 123 AFARSLHSLPVNRISMGAQTFSDRRLRFLHRRHTAEEVGTAVSRLREAGIGNISVDLMFG 182

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T+ +W  ++ R L   V+H+S Y L  E+GT  +++ + G +    + +   +Y+ 
Sbjct: 183 FPGETLEEWNEDIDRLLGLDVEHVSAYSLMYEEGTPLHRLLRAGKVREIDDELYRRMYDT 242

Query: 239 TQSITSAHGLHAYEISNHSFLGA-----------------------------ESLHNLNY 269
                   G   YEISN + L                                S HN  Y
Sbjct: 243 LVDRLGDAGYEHYEISNFARLTPAPDDESPAPKPQTSNLKPQTSTLKSPSPFRSRHNSAY 302

Query: 270 WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           W    YIGIG  AHS    G+ + + ++     +++  +R++     E+E + ++   ++
Sbjct: 303 WHDVPYIGIGAAAHS---YGNGKRSWNVSDI-RAYMDAIRED-RLPCEEERIDADTHYND 357

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++  LR  EGI +      A R   +     LQRQG +E  +   L  T++G+ + DSV
Sbjct: 358 TVLTALRTCEGIELASLSA-AYRTYLMHLALPLQRQGLLEE-KGGWLHLTRKGIYVSDSV 415

Query: 390 IANL 393
           ++ L
Sbjct: 416 MSEL 419


>gi|57242005|ref|ZP_00369945.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
 gi|57017197|gb|EAL53978.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
          Length = 373

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 160/332 (48%), Gaps = 32/332 (9%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLT-GPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   + K  +E +  + + ++++ + Q      SI ++F GGG
Sbjct: 24  YIHIPFCESKCHYCSFTS--LKKKDYEEAYFNALIKDIKFQISQFNLSKNSIKTLFIGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++E +    +   +     +    EI+ EANP+S   N  +  ++ G+NR+S G QS
Sbjct: 82  TPSVVEAKYYEKLFQVLTP--FLKEKAEISCEANPNSSNFNWLKAMKELGINRLSFGAQS 139

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQRALS 196
            +E+ L+FLGR+H+    + ++ +A+   F  ++ DLIY   L  + M ++E+     + 
Sbjct: 140 FDEKKLKFLGRSHSQKAILKSLEVAKKAGFNNVNLDLIYDTKLDTKKMLEFELFYLEKIK 199

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             ++HLS Y L+IE+ T F K+          +  A +L           G   YEISN 
Sbjct: 200 IFINHLSAYHLSIEENTAFSKL-------FHYKKNAPNLMRFFIKGIENLGFKQYEISNF 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIG---PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S       HNL+YW+  +Y+G G    G +   +  +H+      K P       RK  H
Sbjct: 253 S-KNKPCCHNLSYWQGKNYLGAGLSSVGFYENQRFYTHKNLKEYIKEP-----CFRKIEH 306

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                  LS E    E L +GLR   G+  KD
Sbjct: 307 -------LSLEDLNLERLFLGLRSVVGVKKKD 331


>gi|299138769|ref|ZP_07031947.1| HemN domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599405|gb|EFI55565.1| HemN domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 354

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 158/340 (46%), Gaps = 26/340 (7%)

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P S+ +++FGGGTPSL+ P  +  I   + +N+ V+ + EIT+E+ P  +         +
Sbjct: 21  PGSVGTVYFGGGTPSLLAPSQLREIFAALRRNFEVAGDAEITLESAPGQIADELLAEAMR 80

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNR+SLGVQS  ++    +GR H   E +  I   R    P +  DLI  LP QT   
Sbjct: 81  LGVNRVSLGVQSFVDRESAAVGRLHTERECVREILRLRAAGLPEVGADLIAGLPYQTEES 140

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLF--------YKMHKDGDLVLPSENVAVDLYNL 238
           +   L+ A    + HLS+Y L +++ +           + H  G   +P E +A  LY  
Sbjct: 141 FAHSLEVASGVGLTHLSVYMLEVDEDSRLGREVLAGGQRFHAHG---VPQEEIAATLYEQ 197

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAIS 296
             ++    G   YEISN +    +S HN  YW+   Y+G G  AHS +   VG+ R A  
Sbjct: 198 ACAMLPQQGFAQYEISNFAAEEHQSRHNKKYWQRAPYMGFGLDAHSMLLRGVGAVRFA-- 255

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
              +PE   ++         E   +   +  +E + +GLR+ EGIS++         L  
Sbjct: 256 ---NPE---ELADYRAAMPAEPTLVGVREAFEETVFLGLRMTEGISMQQLRSEFAEELVA 309

Query: 357 ---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              E  R L  +G +   +  R R T RG  + + V  +L
Sbjct: 310 PYEEAVRELVDEGLM-LAEEDRWRLTLRGRLVSNEVFGHL 348


>gi|154174156|ref|YP_001408008.1| coproporphyrinogen III oxidase [Campylobacter curvus 525.92]
 gi|112803318|gb|EAU00662.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter curvus 525.92]
          Length = 348

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 14/260 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KCPYC F S V   +     +  + LT++++          SS+F GGGT
Sbjct: 3   LYIHIPFCESKCPYCAFGS-VTNAQALTGGYFDALLTDIKFQIDKFKISKFSSVFIGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  +    I   I+     +   EIT EANP+S  +   +  R  GVNRIS G QS 
Sbjct: 62  PSAVSAKFYKKIFAEISP--FCNDKTEITSEANPNSTNLRWLKDMRNLGVNRISFGAQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  LGR HN ++   A+  A+N  F  ++ DLIYA       +   E+    +  V
Sbjct: 120 FDDKLELLGRAHNCTQIYKAVQNAKNAGFRNINIDLIYATKLDNKKRLAQEVLALKNLGV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H S Y LT+E+ T F +  +     L +++ A+  + + Q      GL  YE+SN    
Sbjct: 180 THASAYSLTLEENTPFERKFE-----LRNDSAALAKFMMKQ--IENIGLKQYEVSN---F 229

Query: 260 GAESLHNLNYWRYGDYIGIG 279
           G    HNL YW+  +YIG G
Sbjct: 230 GKPCKHNLGYWQGKEYIGAG 249


>gi|149194489|ref|ZP_01871585.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
 gi|149135233|gb|EDM23713.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
          Length = 392

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 139/267 (52%), Gaps = 18/267 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NS  +Y+H PFC  KC YC FNS+     + +E F  +  T+++    +       ++F 
Sbjct: 21  NSRLLYIHIPFCDSKCHYCAFNSYTNLNHLKKEYF-NAIKTQIE--NDINKSIQFKTLFI 77

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++      ++  +  N  +   +E+TIE NP+ V +   +  +  G NRIS G
Sbjct: 78  GGGTPSTMKIDFYEKLMKLLEYN--LKDAIELTIECNPN-VTIEWLKEIKNLGFNRISFG 134

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +E+ L+FL RNH+  +AI +I  A+ + F  ++ DLIY+         E +L+   
Sbjct: 135 VQSFDEEKLKFLNRNHSPIQAIHSIENAQKVGFENINLDLIYSTSLDNNKLLENDLKTTF 194

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  + H+S Y L IE+ T +     +GD      +  ++++ + +          YEISN
Sbjct: 195 SLPITHISAYSLMIEENTKW-----EGDYSKRKYDENLEIWFIEK---IKEKFPQYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGA 282
               G   +HNL YW+  +YIGIG GA
Sbjct: 247 ---FGKPCIHNLGYWKLNEYIGIGAGA 270


>gi|281355315|ref|ZP_06241809.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
 gi|281318195|gb|EFB02215.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
          Length = 361

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 147/336 (43%), Gaps = 22/336 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +  Y H PFC  KC YC F S              ++L +++            +++ GG
Sbjct: 1   MNYYFHIPFCRSKCGYCAFYSE----PSPDPGMFDAYLDKLERELDAAPLPPPDTVYLGG 56

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L +P  +  +   I +     +  EI+IEANP +V+    +  R +  NRISLGVQ
Sbjct: 57  GTPTLFDPARLERLFCLIRQKLAPEAGTEISIEANPETVDREKIRLIR-SFANRISLGVQ 115

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  R LGR+        AI L R+  FP+ + DLIYA+P  T   +  +L  A   
Sbjct: 116 SFSAEHRRTLGRDCTQQALHHAIDLIRDAEFPQWNIDLIYAIPGATRRDFFNDLATAARA 175

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT E+G          D + P ++ A  L+       +      YEISN++
Sbjct: 176 GAPHISCYSLTPEEGARLC------DRLQPDDDEAAALWEEIPQQLAPWEFRRYEISNYA 229

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN+N WR G   G GP A S      +  A S+ +    WL        A  E
Sbjct: 230 LPGHECRHNVNVWRGGLLRGFGPAAASFDGALRYAQAASLTE----WL------AGAPPE 279

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
            + +    + +E   + LR   G +   W  + G +
Sbjct: 280 LDEIPGAARLNEIFAVNLRTASGWTPHLWSRVPGAD 315


>gi|332882728|ref|ZP_08450339.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679230|gb|EGJ52216.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 352

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 165/334 (49%), Gaps = 20/334 (5%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-----VEVNNFQGY 125
           + +I+ GGGTPS++    +  + D I   + VS   EITIE NP             Q  
Sbjct: 21  LQTIYLGGGTPSILTYDELKQLFDTIYSYYKVSPTAEITIECNPDDFFRLHTPEQLLQQL 80

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G+NR+SLGVQS  E+ LR + R H  ++    + +A   F  ++ DLIY +P  +  
Sbjct: 81  TSLGINRLSLGVQSFFEEDLRLMNRVHTTTQVTTLLPIASQYFDNITIDLIYGIPMMSNE 140

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +W+  + +ALS+ + H+S Y LT+E+ T  ++    G +    +  A   ++   +I   
Sbjct: 141 RWKENIYKALSFEIPHISAYALTVEEKTALHRFIAIGKIPPIDDTQAYTHFHTLINILEK 200

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE SN    G  S +N  YW    Y+GIGP AHS       + + +I  H   ++
Sbjct: 201 EGFIQYEFSNFGKEGYFSQNNTAYWFGKPYMGIGPSAHS---FSGFKRSWNI-AHNIKYI 256

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL--Q 363
           + +++ G    E E L+ + + +E ++  +R   GI +++   + G+    E ++ L  Q
Sbjct: 257 QQIQQ-GILPQEIEILTPDNRYNELIITRIRTMVGIDLEEVNNVFGK----EYQQYLLTQ 311

Query: 364 RQGFIER----VQFSRLRCTQRGMTMLDSVIANL 393
            + +I +    ++ + L+ T+ G  + D + ++L
Sbjct: 312 AKKYISKGLLCIKENHLKVTKDGKFLSDGIASDL 345


>gi|297190490|ref|ZP_06907888.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197717797|gb|EDY61705.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 415

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 145/282 (51%), Gaps = 29/282 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFN------SHVRRYKVGQENFIQSFLTEMQWMR---QLTGPRS 70
           G YVH PFC   C YC F+      +H+ RY       +++  TE++      +L G R 
Sbjct: 8   GYYVHIPFCTAICDYCGFSVQRSKGAHIARY-------MEALSTEIRRYADAGRLNGHRF 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +    FGGGTPS I+ +++  I   I     VSS+ E+TIE NP S   +  + Y K G+
Sbjct: 61  VCG-HFGGGTPSAIDAEDLISIKRLIDSCCDVSSDAEVTIEVNPISFTSDKAETYAKGGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           NRIS+GVQS ++Q LR +GR H A    +AI  +H A   F   S D+IY +P QT+   
Sbjct: 120 NRISIGVQSFDDQVLRTIGRPHRAGDVEDAIEVVHQAG--FDNFSLDVIYGVPGQTVDCL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITS 244
             +L RA +    HLS ++L I   T   K+ ++G  +LPS   E+   ++ ++ + +  
Sbjct: 178 REDLTRAAATGASHLSCFRLEIIPFTAL-KL-REGAGLLPSRLDESQLNEMDDVVREVLL 235

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYW--RYGDYIGIGPGAHS 284
             G   Y   N +  G  S+HN   +     DY+G G  ++S
Sbjct: 236 GLGYEEYGAFNFAKHGYRSVHNRVAFVAPQCDYVGFGVSSYS 277


>gi|255321395|ref|ZP_05362555.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter showae RM3277]
 gi|255301548|gb|EET80805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter showae RM3277]
          Length = 350

 Score =  135 bits (341), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 157/332 (47%), Gaps = 41/332 (12%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM------QWMRQLTGPRSISSI 74
           +YVH PFC  KCPYC F S      VG+ N   ++   M      Q ++       I ++
Sbjct: 3   LYVHIPFCESKCPYCAFGS-----VVGKRNLTSAYFDAMIADFRGQILKFDVKNGEIETL 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS ++      + + +A    ++ + EIT EANP+S  +      +  GVNR+S
Sbjct: 58  FIGGGTPSAVDGSYYERLFEAVAP--YLAKDAEITAEANPNSASLAWLSQMKSYGVNRVS 115

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G QS  E  L+FLGR H+A +   AI  A+      ++ DLIY     T  + E E Q 
Sbjct: 116 FGAQSFFEDKLKFLGRIHDARQIYEAIISAKTAGLENINVDLIYGTKLDTKKRLEQEAQN 175

Query: 194 ALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  V H+S Y LT+E+ T F  K+    D    S  +A  + +  + +    GL  YE
Sbjct: 176 IRNLGVSHVSAYSLTLEENTPFAGKISYAKD----SPRLAKFMIDRIEEV----GLKQYE 227

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG---SHRVAISIEKHPESWLKMVR 309
           ISN    G    HNL YW+  +Y+ IG  A     VG    HR       +  S L    
Sbjct: 228 ISN---FGQICRHNLGYWQGKNYLAIGAYA-----VGFWRDHRF------YNASNLNAYV 273

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           KN HA  + E LS+++   E + +G R   GI
Sbjct: 274 KNPHA-KKIENLSADELNLERIFLGARSIVGI 304


>gi|296125978|ref|YP_003633230.1| oxygen-independent coproporphyrinogen III oxidase [Brachyspira
           murdochii DSM 12563]
 gi|296017794|gb|ADG71031.1| oxygen-independent coproporphyrinogen III oxidase [Brachyspira
           murdochii DSM 12563]
          Length = 376

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 158/346 (45%), Gaps = 23/346 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YC+F S V    +         L E   +R     + I +I+ GGG
Sbjct: 3   GLYIHIPFCTYKCSYCNFYSIVNMNNIDIYKKYTRLLIEELKIRIKDYKQKIETIYLGGG 62

Query: 80  TPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN----RIS 134
           TPS++    +  +LD I    +T + N  +  E    S   N    Y     N    R+S
Sbjct: 63  TPSVLGHDLLKYLLDNIKDIVYTHNENKYLIKEITIESNINNINDNYINFLENIENIRLS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q+  E+SL  + R+    + I A+ L  ++    +S D I  LP  + TQ + ++  
Sbjct: 123 LGIQTFNEKSLSIINRHTEKKDIINALKLINKSSLENISIDFICGLPLNSKTQIKDDILF 182

Query: 194 ALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +      + H SLY L + +      + K  + +LPSE  ++  Y L        GL  Y
Sbjct: 183 SFDLLPKIKHTSLYYLELTES-----LKKKWEKLLPSEEESIIYYKLASDTLEGLGLKRY 237

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIG---PGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           EISN+S     S+HN NYW   DYIGIG    G ++ V+  + ++          +   +
Sbjct: 238 EISNYSLPDYNSIHNSNYWLMKDYIGIGVSASGCYNNVRYTNVKMI-------NDYFNSI 290

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            KN  A  E E+L  + +  EF+ + LR  +GI +  +  +   + 
Sbjct: 291 SKNKIAEKESEYLDKDTRKKEFIFLSLRTVKGIDINKYNCIFNEDF 336


>gi|153802614|ref|ZP_01957200.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-3]
 gi|124121877|gb|EAY40620.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-3]
          Length = 263

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 7/223 (3%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A+
Sbjct: 1   MQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQAI 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS 
Sbjct: 61  ALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYEISG 116

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     A
Sbjct: 117 YSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKA 176

Query: 315 VVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDI 356
            ++ E L ++Q    EF M   RL E     D+    G  +D+
Sbjct: 177 YLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDV 219


>gi|124514260|gb|EAY55774.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum rubarum]
          Length = 389

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 179/382 (46%), Gaps = 21/382 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YV  PFC ++C YC     ++  +     ++++   E + + +      + +++ GGGT
Sbjct: 14  LYVQVPFCPERCDYCSLPVSLKTERA--PAYLRALFREKKRLMEREDLSGLETLYVGGGT 71

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ + P  +  +L+G+ K+  + +  E+T+E+ P +V  +     R  GV R+S G++S+
Sbjct: 72  PTFLPPALLEDLLEGLQKD--LPTLKEMTVESRPDTVTPDILHLLRSCGVTRLSFGIESV 129

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +RFLGR  N  E +  +   RN FP  +S D I      +   +  E     S  +
Sbjct: 130 RSEHMRFLGRTINVVEPVRFLKFVRNYFPGSVSMDFIAGGEGFSKDAFLQEAHALFSEGL 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS-F 258
           DHLSLY LT+E+ T        G++   +E  A  L+       S  G   YE++N S  
Sbjct: 190 DHLSLYPLTVEERTSLKGRLIRGEISSGTEEAAGVLWEGVVRELSLMGWFRYEVANFSRS 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
                 HN   W+  DY GIG GAH R++        SI  + E+ L ++   G    ++
Sbjct: 250 PDTVCRHNHLVWQGYDYAGIGAGAHQRIRSVRTINVRSIVSY-ENRLSLL---GPPFEKR 305

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEML-----AGRNLDIECERNLQRQGFIERVQF 373
           E L   ++  E L    RL  G  +  W         G  +D+    +L  +G+++   +
Sbjct: 306 EVLDQNERILEILYTNARLSNGFPLS-WLFCQDRTNGGGGMDLS---DLVEEGYLDSGAY 361

Query: 374 S--RLRCTQRGMTMLDSVIANL 393
           S  R+  T++G  +LD ++  +
Sbjct: 362 SSDRVIFTEKGRDLLDGLMGEI 383


>gi|206896118|ref|YP_002247489.1| coproporphyrinogen III oxidase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738735|gb|ACI17813.1| coproporphyrinogen III oxidase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 349

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 160/334 (47%), Gaps = 30/334 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC +KCP+CD+ S     +   + F    + ++   RQL  P  + +++ GGG
Sbjct: 4   GLYLHIPFCYRKCPFCDYYSISNAPETWLDTFTDVIVYQL---RQL--PTKLDTLYVGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP ++       IL  + +        E TIE NP  V+  NF     A   R+S+GVQS
Sbjct: 59  TPLVLGQSRWERILQNLPEA------RERTIELNPEDVKKENFP--LLAHFTRLSVGVQS 110

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +  L+ LGR+    E +  +    ++    S DL+  +P QT  +   +L   ++  V
Sbjct: 111 FSDSVLKTLGRDKLDYEKLLDLLSHWDV----SVDLMVGVPGQTRDEVLRDLISVVALGV 166

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S+Y L + +GT F+  ++  D          DL  + +   + HG   YEISN++  
Sbjct: 167 PHISVYPLEVHEGTPFWGYYRGWDWD------DADLLLMVEKFLTEHGYEHYEISNYARP 220

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G + LHN  YW   +Y  +GP A   V    ++   ++  + ES      K G    E+ 
Sbjct: 221 GHQCLHNKIYWHDEEYYALGPSAAGYVNGVRYKWVSNLRLYVES-----AKLGEPTYEEY 275

Query: 320 F-LSSEQQADEFLMMGLR-LREGISVKDWEMLAG 351
             LS E+Q  E+ +M LR L EGI  +D E   G
Sbjct: 276 VALSWEEQLSEYAIMNLRLLSEGIRKEDVEKRFG 309


>gi|317052295|ref|YP_004113411.1| Radical SAM domain-containing protein [Desulfurispirillum indicum
           S5]
 gi|316947379|gb|ADU66855.1| Radical SAM domain protein [Desulfurispirillum indicum S5]
          Length = 360

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 162/330 (49%), Gaps = 27/330 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISS 73
           +   GVY+H PFC  KC YC F S V      +E+++++ + ++  +    L+ P    +
Sbjct: 3   TAKFGVYLHVPFCSSKCAYCSFYSAVADGGT-RESYVRALIHQLTQVDFGALSPP---YT 58

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL+ P   A +   I K       +E+T+E NP  V+V   +  R A V R+
Sbjct: 59  LYFGGGTPSLLPPSFFASVTH-ILKQRLGCLPMEVTVECNP-DVDVACLRELRAAHVTRV 116

Query: 134 SLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS+E + L  LGR H  AS+  A +   + +   ++ D +  +P   + Q  ++L 
Sbjct: 117 SVGVQSMEPRVLELLGRRHRMASDFPAVLRAGQRLGLEVAVDFMAGVPGAPVDQVLLDL- 175

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A    VDH+S+Y L++E G        DGD          D ++  +    A G   YE
Sbjct: 176 -ASFEFVDHVSVYMLSLEAGHPL-SAELDGDF-------QHDSFSHARDALVARGFEWYE 226

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           I+N +  G  S HN  YW    Y+ +G GA        +RV       PE       ++G
Sbjct: 227 IANFARPGRRSQHNSLYWSGLPYVALGAGAVGFSGSVRYRV-------PEDLRVFCEQDG 279

Query: 313 -HAVVEKEFLSSEQQADEFLMMGLRLREGI 341
             AV  +E++ + +   E +M+G+R  +G+
Sbjct: 280 LPAVCIEEYIGASELLRERIMLGMRTADGV 309


>gi|262199677|ref|YP_003270886.1| coproporphyrinogen dehydrogenase [Haliangium ochraceum DSM 14365]
 gi|262083024|gb|ACY18993.1| Coproporphyrinogen dehydrogenase [Haliangium ochraceum DSM 14365]
          Length = 431

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 150/291 (51%), Gaps = 10/291 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQWM--RQLTGPRSIS 72
           L +Y+H P+CV++C YC + + +    RR ++  + ++ +   E++    R   G R + 
Sbjct: 42  LNLYIHTPYCVQRCAYCHYKTAILGEHRRVEI--DRYVAAVCREIELACERLHVGERPVV 99

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S++FGGGTP+L+   N++ +++ +  N+ +  + EITIE+ P ++        R+ GVNR
Sbjct: 100 SLYFGGGTPTLLSSDNLSHLMECVRANFALQ-DAEITIESGPVTLTERKATLLRELGVNR 158

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            SLG+QS  +  +   GR     +A+ AI LA+++   ++ DL+  L  +T   W   L+
Sbjct: 159 FSLGIQSFSDDIVAQTGRVDTEEQALEAIALAKDMGAVVNIDLLSGLAGETEESWARSLE 218

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  V  LS+Y++ +   T +Y   +  +LVLP++   +       +  +  G     
Sbjct: 219 QALAVDVHTLSIYKMELYANTGYYDALRKDELVLPTDEQELGFIRTAIARLATAGYLPVN 278

Query: 253 ISNHSFLGAESLHNL-NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
                  G  +  NL + WR GD    G  A   + V S++   S+E++ E
Sbjct: 279 FFTFGKGGGFAPRNLRSKWRGGDTAAFGLSAFGSLGVHSYQNTNSMERYLE 329


>gi|219112533|ref|XP_002178018.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410903|gb|EEC50832.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 516

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 173/390 (44%), Gaps = 75/390 (19%)

Query: 19  LGVYVHWPFCVKKCPYCDF----------------------NSHVRRYKVGQENFIQSFL 56
           +G+Y+H P+C ++C YC+F                      N+ +  +      + Q+ L
Sbjct: 71  VGLYIHIPYCQRRCRYCNFAIVPIGSAAAARAQSDEGERPINAQLSGFLEMDHMYTQTIL 130

Query: 57  TEMQW-MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKN---WTVSSNVEITI 110
            E+QW + ++   +  S++SI+FGGGTPSL     I  IL  I      +T+    EIT+
Sbjct: 131 KELQWTLSKMPQDQKVSLTSIYFGGGTPSLAPVATIRTILHAILAEDTPFTLKGGAEITM 190

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP- 169
           E +P +   +  Q  ++ GVNRISLGVQ+L++  L  LGR H   +   ++ + + ++  
Sbjct: 191 EMDPCTFSKDQLQELKELGVNRISLGVQALDDGILESLGRIHRVQDIYKSLSMMQEVYGD 250

Query: 170 --RMSFDLIYALPKQTMTQWEMELQRALSYAVD--HLSLYQLTIEKGTLFYKMHKDGD-- 223
               S DLI  LP  ++  W   LQ+ ++      HLSLY L +E GT+F K + +GD  
Sbjct: 251 ELSYSLDLISGLPGLSLAAWTETLQKVVTLEPKPCHLSLYDLQVESGTVFAKWYGNGDEE 310

Query: 224 --------------LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA-------- 261
                         + LPS+  +  +Y        + G   YE+S+++            
Sbjct: 311 SGWDRVRGNLPTPAVALPSDAESAFMYQYAAGYLRSRGYEHYEVSSYALRDETQTGPSPW 370

Query: 262 ESLHNLNYWRY-GDYIGIGPGAHSRVK---VGSHRVAISIEKHPESWLKMVRKNGHA--- 314
            S HN  YW     +  +G GA S V    V   R  +        W+  VR    A   
Sbjct: 371 RSRHNQIYWATNSQWYALGLGATSFVANELVARPRTLVDYAD----WVNRVRTLPDAGVS 426

Query: 315 -VVEKEFLSSEQQADEFLMMGLRLREGISV 343
            +V+ E L +       ++  LR  EG+ +
Sbjct: 427 EIVDTELLLN------VVLKRLRTSEGLDL 450


>gi|311114773|ref|YP_003985994.1| putative coproporphyrinogen dehydrogenase [Gardnerella vaginalis
           ATCC 14019]
 gi|310946267|gb|ADP38971.1| possible coproporphyrinogen dehydrogenase [Gardnerella vaginalis
           ATCC 14019]
          Length = 238

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 10/202 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR---YKVGQENFIQSFLTEMQWMRQ------LTGPRSI 71
           VYVH PFC+++C YCDFN++  R       +E +    + EM+ +++      +  P++ 
Sbjct: 23  VYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAILEMRLVKKWQEFHGIFEPKA- 81

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTP++++ Q++  IL  I   W +    EIT EANP + + +  +   + G  
Sbjct: 82  QSVFFGGGTPTVLKAQDLVRILQEIRNLWGIMPGAEITTEANPDTADESYIETLAEGGFT 141

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS     L+ L R H        +  A     R S DLIY  P +++  W   +
Sbjct: 142 RISFGMQSAVPHVLKTLDRTHTPENVERGVKTADACGLRSSVDLIYGAPGESLDDWRKSV 201

Query: 192 QRALSYAVDHLSLYQLTIEKGT 213
           + ALS  V+H+S Y LT+E  T
Sbjct: 202 EMALSLGVNHVSAYALTVEPRT 223


>gi|305431671|ref|ZP_07400840.1| possible coproporphyrinogen dehydrogenase [Campylobacter coli JV20]
 gi|304445266|gb|EFM37910.1| possible coproporphyrinogen dehydrogenase [Campylobacter coli JV20]
          Length = 355

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 32/330 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H PFC  KC YC F S ++++   +  + ++   ++ +  Q    +  SI ++F GG
Sbjct: 3   LYIHIPFCESKCHYCAFTS-LKKHDY-ENRYFEALYEDISFHLQKLNIKKNSIKTLFIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +N  +IL  +     +S N+E + EANP+S ++   +  +  G+NRIS G Q
Sbjct: 61  GTPSAVSAKNFEMILTLLEP--FLSKNIEFSSEANPNSADIEWLKTMKNLGLNRISFGAQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQRAL 195
           S   + L FLGR H+      A+     + F +++ DLIY   L  + M ++E+E  + +
Sbjct: 119 SFHPKKLEFLGRIHDQKMIFKALENVNKLGFKKINLDLIYDTKLDDKKMLEFELEQLKQI 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              + HLS Y LTIE  + F K  H   +     +    +L NL        G   YEIS
Sbjct: 179 KNLITHLSAYNLTIEPLSAFAKKEHFKKNAPYLMKFFIQELQNL--------GFLQYEIS 230

Query: 255 NHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKN 311
           N +   A+   HNL YW+  DY+G G  A S  K      A    K+ +S+L+  + R  
Sbjct: 231 NFAKNNAQICKHNLAYWKGLDYLGCGLSAVSCYKNERFYTA----KNLKSYLQNPIFRD- 285

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
               VEK  L+ E    E L +GLR   GI
Sbjct: 286 ----VEK--LNQEDLNLEHLFLGLRSIVGI 309


>gi|224012891|ref|XP_002295098.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969537|gb|EED87878.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 520

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 201/481 (41%), Gaps = 105/481 (21%)

Query: 5   SAYENNMTGQGSN----SLGVYVHWPFCVKKCPYCDF--------NSHVRRYKVGQENFI 52
           S +EN++  + ++    S G+YVH P+C ++C YCDF         +H   ++     + 
Sbjct: 48  SPHENDVQAKDNSNRDISYGLYVHIPYCRRRCKYCDFAIVPIGKDQTHNIGFQQMDLTYR 107

Query: 53  QSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSL-------------IEPQNIALILDGIA 97
           QS + E+  +   T P  I   SI+FGGGTPSL             +EP +    L+   
Sbjct: 108 QSVVDEISLIGSTT-PNKIPLRSIYFGGGTPSLAPLTTLREIMRALLEPDDAPFYLEN-- 164

Query: 98  KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
                  + EITIE +P +  +   +  +  G NRISLGVQS ++  L  +GR H +++ 
Sbjct: 165 -----EGDAEITIEMDPGTFNLTYLEAIKAMGFNRISLGVQSFDDDILATMGRVHRSADV 219

Query: 158 IAAIHLARNIF----PRMSFDLIYALPKQTMTQWEMELQRALSYAVD--HLSLYQLTIEK 211
             +I + + +F       S DLI  +P  T+  W   L  A+       H+SLY L +E+
Sbjct: 220 YRSIEMIQEVFGEEDSNYSIDLISGVPGLTLAGWTETLYNAVRLHPRPLHISLYDLQVEQ 279

Query: 212 GTLFYKMHKDG-----------------------DLVLPSENVAVDLYNLTQSITSAHGL 248
           GT F K++ DG                          LPS      +Y        +   
Sbjct: 280 GTYFGKIYGDGRKEDSSTAAPVVVASSKSGNATTHPFLPSSEDCAFMYRYASGYLRSKRY 339

Query: 249 HAYEISNHSFLGAESL-----HNLNYWRY-GDYIGIGPGAHS--------RVKVGSHRVA 294
             YEIS+++++  + L     HN  YW   G +  IG G+ S        R +  S  ++
Sbjct: 340 QHYEISSYAYVDDDGLAHRSKHNQIYWEVGGQWYAIGLGSTSNVDGVRFARPRALSDYIS 399

Query: 295 ISIE---------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
            + E              WL+    NG     +E +  E    + +M  LR  EG+ + D
Sbjct: 400 WTRELKEAYGKDVNAEPPWLQSSNGNG-----EENVGGEDDISDIIMTRLRTSEGLDL-D 453

Query: 346 W-----------EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           W            +L G  L ++ +   +     ERV   RL+    G    +++I+N+ 
Sbjct: 454 WIAEHYDTSHVEAILGGFELALDLDLGERVGNSTERVGLIRLK-DPNGFLFSNNIISNIF 512

Query: 395 V 395
           V
Sbjct: 513 V 513


>gi|301168406|emb|CBW27996.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteriovorax marinus SJ]
          Length = 373

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 42/388 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
            +Y+H+PFC   C YCDF  ++       Y   + + ++ +    Q++ R      S+++
Sbjct: 8   SLYIHFPFCRHLCNYCDFYKNIPVDKELEYGEFETSLVEGYSELEQFLLRNNCEISSLNT 67

Query: 74  IFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTPSL   +    + + +  +N  +SS  E T+E NP +        ++ +GVNR
Sbjct: 68  LYLGGGTPSLWGVRGAEFLKNFLLERNIKLSSTCEFTLEVNPGAWTREALSSWQSSGVNR 127

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM--E 190
            SLG+QSL+   L+ + R H+  +    +          S D +  LP       ++  E
Sbjct: 128 YSLGIQSLDANFLKVIDRVHSIDDVYETLKFFHEHNLSFSVDFMLGLPFSEKYNRDILKE 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  L YA +H+SLY LT + G     +H+D    LPSE      Y    +     G   
Sbjct: 188 LEEILDYAPEHISLYILTTKAGY----IHRDH---LPSEEYIEKEYLDVANFLRGKGFDH 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G ES HNL YWR      +G  A   +K  + R           W  +  K
Sbjct: 241 YEVSNFAKKGKESRHNLQYWRSESVAALGASATGYLKEAATRF---------KWKVLESK 291

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLRE----GISVKDWEMLAGRNLDIECERNLQRQG 366
                 ++E L+ ++   E + MGLR+ +     + ++D + L       +   + ++  
Sbjct: 292 -----YKEEILTEDELRLEEIYMGLRINQLYDLSLQIEDLKTLE------QVISHWEKSS 340

Query: 367 FI-ERVQFSRLRCTQRGMTMLDSVIANL 393
           ++ ERV + +L    RG  +LDS++ +L
Sbjct: 341 YLKERVGY-KLSLNSRGFLLLDSLMNDL 367


>gi|325849468|ref|ZP_08170763.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480124|gb|EGC83198.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 212

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSI 74
            +G Y+H PFC KKC YCDF +++       EN ++ ++  +    +L   R    I +I
Sbjct: 3   KVGCYIHIPFCQKKCYYCDFCAYM-----NVENRVKPYIKNLIKEIKLYQERLNIEIDTI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTPS ++ + I  I++ I K          TIE NP+ +       Y+  G+NRIS
Sbjct: 58  HIGGGTPSYVDAKYIEEIVNEIKKFKIEKIKEF-TIECNPNFISKEKLAIYKDIGINRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS +++ L+ +GRNH A  A+  I + R+  F  +SFDL+  LP+QT    + EL  
Sbjct: 117 LGVQSFDDEVLKEIGRNHTADIALKDIDMIRDAGFDNLSFDLMLNLPRQTYKSVKNELAM 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               + +H+S Y L +E+G+ FY + K G
Sbjct: 177 VKKISPEHISWYSLILEEGSRFYALDKKG 205


>gi|291286293|ref|YP_003503109.1| oxygen-independent coproporphyrinogen III oxidase [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883453|gb|ADD67153.1| oxygen-independent coproporphyrinogen III oxidase [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 363

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KC YC F S    Y   Q ++ ++ +++++  ++     +  +++ GGG
Sbjct: 3   GLYVHLPFCRNKCAYCGFYSETDCYDT-QADYFKALISDLRSRKK----HAYETLYIGGG 57

Query: 80  TPSLIEPQNIALILDG--IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TPS  + + +A  LD   I   W      E TIEANP S++    +       +R+S+G 
Sbjct: 58  TPSTADRKLLASFLDAVSITCRWDFK---ESTIEANPESIDKEFCRIVDFYKFSRVSIGC 114

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L+ L R H+AS+   +  + R + P   +S D++Y +P          L+  +
Sbjct: 115 QSTSDDVLQKLTRIHSASDIFHSYDMVRKLCPDTDVSLDMMYDIPGTQFESTYKTLKDLI 174

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   +H+S Y  + +   L     K+GD        A D   +   + +A G   YEISN
Sbjct: 175 ALNPEHISAYTYSFDTEFL-----KEGDAD------ATDFMVVRDELENA-GYVKYEISN 222

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES+HN+NYW  G+Y GIG  A S       R+      +   ++   ++     
Sbjct: 223 FARPGHESMHNINYWMLGEYDGIGSSAWSLSYEDGKRILRGKSDNLPEYIHSPKE----Y 278

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVK 344
            E E     Q A E ++ GLRL +G+  +
Sbjct: 279 AETEITEPPQTALEEIVFGLRLAKGLDAE 307


>gi|156336954|ref|XP_001619757.1| hypothetical protein NEMVEDRAFT_v1g223855 [Nematostella vectensis]
 gi|156203563|gb|EDO27657.1| predicted protein [Nematostella vectensis]
          Length = 211

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 99/148 (66%), Gaps = 1/148 (0%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           V  E   +  + E + + +++G ++I+S++FGGGTPSL +P   + IL+ + +   ++ N
Sbjct: 54  VDHERMKKCLVKECKSLLEISGAKTINSVYFGGGTPSLAKPSTFSAILECLQQKGVLNPN 113

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            E+T+EANP+S E +  + ++ AG+NR+SLGVQSL E  L  LGR  +  E++ ++ +A+
Sbjct: 114 AEVTLEANPTSAESHKLRDFKTAGINRLSLGVQSLSEDELAVLGRQGSCLESLKSLDMAK 173

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQ 192
            +FP R+S DL++  PKQT  +WE EL+
Sbjct: 174 VLFPGRVSVDLMFGRPKQTAPEWERELE 201


>gi|315638270|ref|ZP_07893451.1| putative coproporphyrinogen dehydrogenase [Campylobacter
           upsaliensis JV21]
 gi|315481617|gb|EFU72240.1| putative coproporphyrinogen dehydrogenase [Campylobacter
           upsaliensis JV21]
          Length = 373

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 136/263 (51%), Gaps = 17/263 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLT-GPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   + K  +E +  + + ++++ + Q      SI ++F GGG
Sbjct: 24  YIHIPFCESKCHYCSFTS--LKKKDYEEAYFNALIKDIKFQISQFNLSKNSIKTLFIGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++E +    +   +     +    EI+ EANP+S   N  +  ++ G+NR+S G QS
Sbjct: 82  TPSVVEAKYYEKLFQVLMP--FLKEKAEISCEANPNSSNFNWLKAMKELGINRLSFGAQS 139

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQRALS 196
            +E+ L+FLGR+H+    + ++ +A+   F  ++ DLIY   L  + M ++E+     + 
Sbjct: 140 FDEKKLKFLGRSHSQKAILKSLEVAKKAGFNNVNLDLIYDTKLDTKKMLEFELLHLEKIK 199

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             ++HLS Y L+IE+ T F K+          +  A +L           G   YEISN 
Sbjct: 200 IFINHLSAYHLSIEENTAFSKL-------FHYKKNAPNLMRFFIKGIENLGFKQYEISNF 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIG 279
           S       HNL+YW+  +Y+G G
Sbjct: 253 S-KNKPCRHNLSYWQGKNYLGAG 274


>gi|237749800|ref|ZP_04580280.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
 gi|229374550|gb|EEO24941.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
          Length = 346

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 19/321 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S V +  +    F Q+ L +++   +    + I+SIF GGGT
Sbjct: 3   LYIHIPFCDSKCGYCAFFSQVNKENMITPYF-QALLKDIKHTLKHFSVKKITSIFVGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ ++   I + +      +S+ EIT E NP+ +  +     +  G NR+S+GVQS 
Sbjct: 62  PNFVDSKHYKEIFNLLMP--LCASDCEITFEMNPNLITHSWLSEIKGLGANRLSIGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +  L+ L R H+  +   A  +A      +S DLIY     T  + E EL+ AL   + 
Sbjct: 120 YDDKLQMLERVHSYDDICRAFDIAYKHIENISLDLIYDCKLDTNERIEYELESALKLPIS 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L+I+  + F      GD    S           +      G   YE+SN S+  
Sbjct: 180 HISAYSLSIDSNSRF------GDRKAYSLQSRESFGVFVRDFLQKKGFRQYEVSNFSY-K 232

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW    Y+G+G  +  RV    +    ++E++  +  +  RK       +E 
Sbjct: 233 NKCKHNLGYWNGEAYLGVGASSVGRVDSVRYFATPNLEQYITNPFQ--RK-------EEV 283

Query: 321 LSSEQQADEFLMMGLRLREGI 341
           LS      E + MG R   G+
Sbjct: 284 LSQNDLNFESIFMGFRSEIGV 304


>gi|115374009|ref|ZP_01461299.1| coproporphyrinogen III oxidase, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|310825251|ref|YP_003957609.1| coproporphyrinogen III oxidase [Stigmatella aurantiaca DW4/3-1]
 gi|115369016|gb|EAU67961.1| coproporphyrinogen III oxidase, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398323|gb|ADO75782.1| Coproporphyrinogen III oxidase [Stigmatella aurantiaca DW4/3-1]
          Length = 427

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 180/379 (47%), Gaps = 27/379 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSI 74
           L +YVH P+CV++C YC + +       K   + ++QS  TE+Q    R     R   SI
Sbjct: 43  LNIYVHTPYCVQRCAYCHYKTTTLNENRKAEIDRYVQSLCTEIQLASKRFHLKERPTHSI 102

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP+L+  +N++ I+D + ++ T + + EIT+E  P ++        +  GVNRIS
Sbjct: 103 YFGGGTPTLLSKENLSRIMDCLREHLTFA-DPEITVEGEPVTLIQAKADHLKSLGVNRIS 161

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QSL ++ +   GR      A  AI +A+     ++ DL+  L  +T   W   ++RA
Sbjct: 162 LGIQSLADEIILKTGRRDTEKHAFKAIEIAKGTGAVVNVDLMSGLAGETDATWAYTVERA 221

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  V  L++Y+  +   T +Y   K   L LPS++   +L     +I          ++
Sbjct: 222 LAADVHSLTVYKTELYANTEYYAGIKKNTLELPSDD--EELKYAAYAIEQIEAKGYLPVN 279

Query: 255 NHSFL---GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW----LKM 307
             +F    G    H  + WR  D    G  A   +   S +    +EK+  +     L +
Sbjct: 280 FFTFTQGGGHMQRHTTSKWRGDDIYAFGVSAFGSIGSFSVQNISDLEKYSSTLEAGELPI 339

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQR 364
            R  G+ +  K+ ++ +      +++G++L   +  K +    G +L   CE     L  
Sbjct: 340 AR--GYHLNAKDLMARD------VVLGMKLIH-LDRKAFRQRYGLDLVRLCEPMVNALVE 390

Query: 365 QGFIERVQFSRLRCTQRGM 383
           +GFI  V   RL  T++G+
Sbjct: 391 EGFIT-VSDERLSLTRKGI 408


>gi|300870273|ref|YP_003785144.1| putative coproporphyrinogen III oxidase [Brachyspira pilosicoli
           95/1000]
 gi|300687972|gb|ADK30643.1| putative coproporphyrinogen III oxidase [Brachyspira pilosicoli
           95/1000]
          Length = 350

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 19/306 (6%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIA---KNW-TVSS 104
           +N+  + + E++ +R       I++I+FGGGTPS++    +  +LD I    KN+  +  
Sbjct: 8   KNYADALIEELK-LRIDDYNEEINTIYFGGGTPSVLNANLLKYLLDNILNILKNYQDIKL 66

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
             EITIE+N + +              RISLG+Q+  E+SL  + R+    E + A+ + 
Sbjct: 67  IKEITIESNINDINSEYINFLESIDNIRISLGLQTFNEKSLSLINRHTELEEIVNALKII 126

Query: 165 RN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKD 221
            N     +S D I  LP     Q + ++ +AL       H+SLY L + K      + + 
Sbjct: 127 NNSTIENISLDFISGLPLNDKLQTKKDILKALELLPKTKHISLYYLELTKS-----LEEK 181

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
               LP E+ +V+ Y ++ +     G   YEISN+S    ES+HN NYW+  +Y+G+G  
Sbjct: 182 WRDYLPKEDESVEYYEISSNTLKDLGFIRYEISNYSINNYESIHNSNYWKLKNYLGLGAS 241

Query: 282 AHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           A     VG + R      K+ +++++ +++N   + E E++  E Q  EF+ + LR  +G
Sbjct: 242 A-----VGYYNRERYENIKNVKTYIEHIKQNKKPIKEIEYIDRETQKKEFIFLSLRTVKG 296

Query: 341 ISVKDW 346
           I++ ++
Sbjct: 297 ININNY 302


>gi|57168184|ref|ZP_00367323.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
 gi|57020558|gb|EAL57227.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
          Length = 355

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 30/329 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H PFC  KC YC F S ++++   +  + ++   ++ +  Q    +  SI ++F GG
Sbjct: 3   LYIHIPFCESKCHYCAFTS-LKKHDY-ENRYFEALYEDISFHLQKLNIKKNSIKTLFIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +N  +IL  +     +S N+E + EANP+S ++   +  +  G+NRIS G Q
Sbjct: 61  GTPSAVSAKNFEMILTLLEP--FLSKNIEFSSEANPNSADIEWLKTMKNLGLNRISFGAQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQRAL 195
           S   + L FLGR H+      A+     + F +++ DLIY   L  + M ++E++  + +
Sbjct: 119 SFHTKKLEFLGRIHDQKMIFKALENVNKLGFKKINLDLIYDTKLDDKKMLEFELKQLKQI 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              + HLS Y LTIE  + F K  KD       +N    +    Q +    G   YEISN
Sbjct: 179 KNLITHLSAYNLTIEPLSAFAK--KDH----FKKNAPYLMKFFIQELQKL-GFLQYEISN 231

Query: 256 HSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKNG 312
            +    +   HNL YW+  DY+G G  A S  K      A    K+ +S+L+  + R   
Sbjct: 232 FAKNKTQICKHNLAYWKGLDYLGCGLSAVSCYKNERFYTA----KNLKSYLQNPIFRD-- 285

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGI 341
              VEK  L+ E    E L +GLR   GI
Sbjct: 286 ---VEK--LNQEDLNLEHLFLGLRSIVGI 309


>gi|329577058|gb|EGG58531.1| radical SAM domain protein [Enterococcus faecalis TX1467]
          Length = 194

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 6/178 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 7   YIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+ ++     ++LS
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLVKFSRYFDKSLS 181


>gi|283954140|ref|ZP_06371665.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283794419|gb|EFC33163.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 355

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 133/274 (48%), Gaps = 31/274 (11%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLT-GPRSISSIF 75
           Y+H PFC  KC YC F S      + + ++ +++   ++      ++Q       I ++F
Sbjct: 4   YIHIPFCESKCHYCAFTS------LKKNDYEKAYFKALKEDIAFQLKQFNIQSNQIKTLF 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++  N   I + +     +  NVEI+ EANP+S  +N  +  +  GVNRIS 
Sbjct: 58  IGGGTPSCVDVYNYEDIFEILGP--LLDKNVEISCEANPNSATLNWLKTMKNLGVNRISF 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQ 192
           G QS   + L+FLGR HN    I  +  A  + F  ++ DLIY   L  + M ++E+   
Sbjct: 116 GAQSFHPKKLQFLGRIHNKEMIIKTLENANKVGFKNINIDLIYDTKLDSKKMLEFELLHL 175

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AHGLH 249
           + +   + HLS Y LTIE  T F K           E++  +  NL +         G  
Sbjct: 176 KKIKTLITHLSAYNLTIESNTAFAK----------KEHLKKNAPNLMKFFIKQLLELGFF 225

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
            YEISN S   A+   HNL YW+  +Y+  G  A
Sbjct: 226 QYEISNFSKTKAQICKHNLAYWQGKNYLACGLSA 259


>gi|283955992|ref|ZP_06373481.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792468|gb|EFC31248.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 355

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 128/277 (46%), Gaps = 31/277 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNIGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS G QS   + L FLGR HN    I A+  A  I F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGAQSFHPKKLHFLGRIHNQEMIIKALENANKIGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LYLKQIKALITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
               YEISN S   A+   HNL YW+  +Y+  G  A
Sbjct: 223 DFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSA 259


>gi|270650392|ref|ZP_06222218.1| coproporphyrinogen dehydrogenase [Haemophilus influenzae HK1212]
 gi|270317184|gb|EFA28787.1| coproporphyrinogen dehydrogenase [Haemophilus influenzae HK1212]
          Length = 142

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++  + ++++I    Q    ++Q  + +   + + SI
Sbjct: 13  LSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDVIQQQKLHSI 72

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RIS
Sbjct: 73  FIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRIS 132

Query: 135 LGVQSLEE 142
           +G+QS  +
Sbjct: 133 MGIQSFND 140


>gi|86151828|ref|ZP_01070042.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153303|ref|ZP_01071507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613561|ref|YP_001000281.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315124100|ref|YP_004066104.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|85841457|gb|EAQ58705.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85843029|gb|EAQ60240.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87250516|gb|EAQ73474.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315017822|gb|ADT65915.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 355

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 152/333 (45%), Gaps = 32/333 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLT-GPRSISSIFF 76
           +  Y+H PFC  KC YC F S  +     ++ + Q+   ++ + ++Q       I ++F 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKN--DYEKAYFQALKEDIVFQLKQFNIQSNQIKTLFI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G
Sbjct: 59  GGGTPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNRISFG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQR 193
            QS   + L FLGR HN    I A+  A  + F  ++ DLIY   L  + M ++E+   +
Sbjct: 117 AQSFHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AHGLHA 250
            +   + HLS Y LTIE  T F K           E+   +  NL +             
Sbjct: 177 QIKALITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLELNFFQ 226

Query: 251 YEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YEISN S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+      
Sbjct: 227 YEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN------ 280

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                    E LSS+    E L +GLR   GI 
Sbjct: 281 ---PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|167005234|ref|ZP_02270992.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 361

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 151/330 (45%), Gaps = 32/330 (9%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLT-GPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + Q+   ++ + ++Q       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFQALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQRALS 196
              + L FLGR HN    I A+  A  + F  ++ DLIY   L  + M ++E+   + + 
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AHGLHAYEI 253
             + HLS Y LTIE  T F K           E+   +  NL +             YEI
Sbjct: 180 ALITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLELNFFQYEI 229

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+         
Sbjct: 230 SNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN--------- 280

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                 E LSS+    E L +GLR   GI 
Sbjct: 281 PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|13357834|ref|NP_078108.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762029|ref|YP_001752357.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920508|ref|ZP_02931796.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508683|ref|ZP_02958175.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701936|ref|ZP_02971580.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|11356998|pir||F82911 oxygen-independent coproporphyrinogen III oxidase UU274 [imported]
           - Ureaplasma urealyticum
 gi|6899246|gb|AAF30683.1|AE002124_5 oxygen-independent coproporphyrinogen III oxidase [Ureaplasma
           parvum serovar 3 str. ATCC 700970]
 gi|168827606|gb|ACA32868.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902982|gb|EDT49271.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182675603|gb|EDT87508.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700683|gb|EDU18965.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 354

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 33/329 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC   C + DF    R  K  Q + F ++FL  ++        +   +I+ GGG
Sbjct: 10  LYIHIPFCNYICIFSDFK---RILKTPQTKKFFKNFLENIKMHINNFKIKQFKTIYLGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P+ +  Q + ++L  I+    V  N E TIE NP  +       ++K  +NRISL VQS
Sbjct: 67  VPNCLNNQELEILLKTISP--YVDDNCEYTIECNPELINQTQINLFKKYKINRISLNVQS 124

Query: 140 LEEQSLR---FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +    L+   F+  N ++ +AI  +H  +N    +S D ++ +   T+   +      L+
Sbjct: 125 MNNDVLKQMNFIHTNQDSKKAINLLH--KNGLYNVSCDFLFCISILTLKDLDDVFNFILN 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN- 255
           + ++H+S Y L I++ +L  K H     +   E   ++  N   +  +    H YE+ N 
Sbjct: 183 HKINHVSFYSLEIKEQSLLKKYH-----ITIDEEKEIEQMNYIINKFAGLNFHRYEVCNW 237

Query: 256 -HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++F      HNL YWR  D+  IG GAH   K   +    SI K+P             
Sbjct: 238 TNNFRYIAK-HNLAYWRTEDWAAIGWGAHGYEKNIVYFFDGSI-KNP------------- 282

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISV 343
           ++ K+ L+  +   + LMMGLRL++G+++
Sbjct: 283 ILIKKVLTKHELYQQILMMGLRLKDGLNL 311


>gi|303232223|ref|ZP_07318922.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Atopobium vaginae PB189-T1-4]
 gi|302481633|gb|EFL44694.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Atopobium vaginae PB189-T1-4]
          Length = 443

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 154/360 (42%), Gaps = 42/360 (11%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++  +YVH PFC +KC YCDF S         +  ++ +  T+MQ +        + + +
Sbjct: 22  SAYSLYVHIPFCSQKCGYCDFASWPYAANTNDRARYLAAVCTDMQQLASWGLLCDVQTAY 81

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  ++  IA+   + S VE + EANP S          ++ + RISL
Sbjct: 82  IGGGTPTCLG-SKLPELISSIAE---LCSPVEFSCEANPDSTSDELLAQLAQSPLTRISL 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  E+ LR LGR H A +A++ +  A      +S DL+ A+P QT   W   L    
Sbjct: 138 GVQSCHERELRALGRTHTARQALSRLRAAAAQGLCVSCDLMCAIPYQTPASWYQSLTLCC 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              + H+S+Y L IE  T F+K +        ++ V          I    G   YE+++
Sbjct: 198 EQGISHISIYPLAIEPHTAFWKRYSSVHPAFNNDLVQAARMKAAARILQEAGFARYEVAS 257

Query: 256 ---------HSFLGAE-----SLHNLNYWRYGDYIGIGPGAHSRVKVGSH---------- 291
                    HS   A+       HN  YW    YIG+G  A S +    +          
Sbjct: 258 YARVMSHDTHSAASAQVPLYACAHNRAYWTQEPYIGVGTSAASMLTAWQYDMLRKHTPQL 317

Query: 292 --------RVAISIEKHPESWLKMVRKNG--HAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                   RV I++    +S   M    G  H  +  EF + EQ   E LM+  R   GI
Sbjct: 318 PERTTSVARVRITVN---DSRAHMCAYPGWQHRNLTLEFFNEEQCTAEDLMLQARCTCGI 374


>gi|242129443|gb|ACS83777.1| coproporphyrinogen III oxidase [Nonomuraea sp. Bp3714-39]
          Length = 403

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 168/356 (47%), Gaps = 27/356 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF--NSHVRRYKVGQEN-----FIQSFLTEMQ----WMRQ 64
           +  L +Y + PFC  KC +CD+     VR  ++G+++     ++++  T+++     +R+
Sbjct: 2   TKPLLIYANVPFCNSKCHFCDWVVQVPVRDLRLGEQSPGRVAYLEAIRTQIRVQAPALRE 61

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P     +++GGGT S++ P  I  +   ++  + +S+  E TIE +P S++ +  + 
Sbjct: 62  HYHP---DIVYWGGGTASILGPHEIESLYGTLSAEFDLSTVREATIEGSPESLDRDKLRL 118

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NRIS+GVQS ++  LR LGR H A +A+ A+  A    F  ++ DLI   P QT
Sbjct: 119 LRELGFNRISIGVQSFDDARLRRLGRAHAADQALTAVQDAHEAGFTNINIDLIVGFPGQT 178

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSI 242
             +    ++ AL+  ++H S+Y      GT+  K +H+   L L   N+ +  Y + + +
Sbjct: 179 GQEVADSVRTALTLPINHFSIYPYRASPGTVLRKQVHRGAQLDL---NLQLQAYGIAREL 235

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             A G   Y +S       +S     Y    D+IG G GA+S +     R  +S EK   
Sbjct: 236 LEAAGFPEYAMSYFGHPRCQS-DEAYYQLRMDWIGFGSGANSLIG----RRYLSYEK--- 287

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
             L     N  A        S Q    FL   L   EG+  + ++   G  L   C
Sbjct: 288 GKLAHYNTNPLAFDINAPAHSPQLTLHFLSQALTTAEGLDARLYQQRTGVPLRTAC 343


>gi|206602846|gb|EDZ39327.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum sp. Group II '5-way CG']
          Length = 389

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 178/380 (46%), Gaps = 17/380 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YV  PFC ++C YC     ++  +     ++++   E + + +      + +++ GGGT
Sbjct: 14  LYVQVPFCPERCHYCSLPVSLQTERA--PAYLRALFREKKRLMEREDLSGLETLYVGGGT 71

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++   ++  +L+ + K   +    EIT+E+ P +V        R +GV R+S G++S+
Sbjct: 72  PTVLPLPHLQELLEELQKG--LPPLAEITVESRPDTVTPEILHRLRSSGVTRLSFGMESV 129

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +RFLGR  N  E +  +   RN F   +S D I      +   +  E Q  L+  +
Sbjct: 130 RSEHMRFLGRTMNVLEPVRFLEFVRNHFSGFVSMDFIAGGEGFSEDAFLQEAQSLLAEGL 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS-F 258
           DHLSLY LT+E+ T      + G++   +E+ A  ++       S+ G   YE++N S  
Sbjct: 190 DHLSLYPLTVEEQTSLKGRLRRGEISAGTEDAAGRIWERIVRALSSMGWFRYEVANFSRS 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE- 317
                 HN   W+  D+ GIG GAH R++        S+  + E    M      A  E 
Sbjct: 250 PDTVCRHNHLVWQGYDHAGIGAGAHQRIRSVRTINVRSLVSYEERLFSM-----KAPFEG 304

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQFS- 374
           +E L  +++  E L    RL  G  +  W     R+  I      +L  +G+++   +S 
Sbjct: 305 RESLDQDERLLEILYTNARLSNGFPLS-WLSSEDRSNAIGGADFSDLVEEGYLDSRAYSS 363

Query: 375 -RLRCTQRGMTMLDSVIANL 393
            R+  T++G  +LD ++  +
Sbjct: 364 GRVIFTEKGRDLLDGLMGEI 383


>gi|153833812|ref|ZP_01986479.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           HY01]
 gi|148869870|gb|EDL68838.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           HY01]
          Length = 463

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R ++ + FGGGTP+ +  + I  ++D + + +T S++ EI+IE +P  +E+    
Sbjct: 104 SLLGERQVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDADLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|157414862|ref|YP_001482118.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385826|gb|ABV52141.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747499|gb|ADN90769.1| Putative oxidoreductase [Campylobacter jejuni subsp. jejuni M1]
          Length = 355

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 149/337 (44%), Gaps = 40/337 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS G QS   + L FLGR HN    I A+  A  + F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGAQSFHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LHLKQIKALITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               YEISN S   ++   HNL YW+  +Y+  G  A    +      A +++ + E+  
Sbjct: 223 DFFQYEISNFSKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN-- 280

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                        E LSS+    E L +GLR   GI 
Sbjct: 281 -------PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|168821661|ref|ZP_02833661.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205341856|gb|EDZ28620.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320088409|emb|CBY98168.1| O2-independent coproporphyrinogen III oxidase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 457

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +A    A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDAEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|315931779|gb|EFV10734.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 361

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 127/274 (46%), Gaps = 31/274 (11%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I ++F
Sbjct: 4   YIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIKTLF 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS 
Sbjct: 58  IGGGTPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNRISF 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQ 192
           G QS   + L FLGR HN    I A+  A  + F  ++ DLIY   L  + M ++E+   
Sbjct: 116 GAQSFHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHL 175

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AHGLH 249
           + +   + HLS Y LTIE  T F K           E+   +  NL +            
Sbjct: 176 KQIKALITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLELDFF 225

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
            YEISN S   ++   HNL YW+  +Y+  G  A
Sbjct: 226 QYEISNFSKTKSQICKHNLAYWQGKNYLACGLSA 259


>gi|284925841|gb|ADC28193.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 355

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 148/337 (43%), Gaps = 40/337 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVNAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS GVQS   + L FLGR HN    I  +  A  + F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LHLKQIKDLITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               YEISN S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+  
Sbjct: 223 DFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN-- 280

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                        E LSS+    E L +GLR   GI 
Sbjct: 281 -------PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|315928646|gb|EFV07933.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 355

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 148/337 (43%), Gaps = 40/337 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVNAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS GVQS   + L FLGR HN    I  +  A  + F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LHLKQIKDLITHLSAYNLTIESNTAFSK----------KEHFKKNAPNLMKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               YEISN S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+  
Sbjct: 223 DFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN-- 280

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                        E LSS+    E L +GLR   GI 
Sbjct: 281 -------PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|269959437|ref|ZP_06173820.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           1DA3]
 gi|269835874|gb|EEZ89950.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           1DA3]
          Length = 463

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTHYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R+++ + FGGGTP+ +  + I  ++D + + +T S++ EI+IE +P  +E+    
Sbjct: 104 SLLGERTVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRGEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDDDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|57238224|ref|YP_178695.1| coproporphyrinogen III oxidase [Campylobacter jejuni RM1221]
 gi|86149898|ref|ZP_01068127.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596900|ref|ZP_01100136.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562231|ref|YP_002344010.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|57167028|gb|AAW35807.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni RM1221]
 gi|85839716|gb|EAQ56976.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190589|gb|EAQ94562.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359937|emb|CAL34726.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|315057994|gb|ADT72323.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 355

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 148/337 (43%), Gaps = 40/337 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVNAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS GVQS   + L FLGR HN    I  +  A  + F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LHLKQIKDLITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               YEISN S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+  
Sbjct: 223 DFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN-- 280

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                        E LSS+    E L +GLR   GI 
Sbjct: 281 -------PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|146313730|ref|YP_001178804.1| coproporphyrinogen III oxidase [Enterobacter sp. 638]
 gi|145320606|gb|ABP62753.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter sp. 638]
          Length = 457

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   ++++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADHYLDALEQEILHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++D +  N+   ++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMDLLRANFRFDADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEDFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++ITS
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETITS 276


>gi|205355430|ref|ZP_03222201.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346664|gb|EDZ33296.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 355

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 151/333 (45%), Gaps = 32/333 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLT-GPRSISSIFF 76
           +  Y+H PFC  KC YC F S  +     ++ + Q+   ++ + ++Q       I ++F 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKN--DYEKAYFQALKEDIVFQLKQFNIQSNQIKTLFI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G
Sbjct: 59  GGGTPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNRISFG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEMELQR 193
            QS   + L FLGR HN    I  +  A  + F  ++ DLIY   L  + M ++E+   +
Sbjct: 117 AQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AHGLHA 250
            +   + HLS Y LTIE  T F K           E+   +  NL +             
Sbjct: 177 QIKDLITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLELDFFQ 226

Query: 251 YEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YEISN S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+      
Sbjct: 227 YEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN------ 280

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                    E LSS+    E L +GLR   GI 
Sbjct: 281 ---PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|33989769|gb|AAH56485.1| Rsad1 protein [Mus musculus]
          Length = 248

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 97/180 (53%), Gaps = 4/180 (2%)

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL+  LP Q +  W  +LQ+ L +  DHLSLYQLT+E+GT  +   + G L  P  ++A 
Sbjct: 1   DLMLGLPAQKVEPWLQQLQKLLYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAA 60

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGS 290
           ++Y   +++    G   YE+SN +  GA S HN  YW+ G Y+GIGPGAH R      G 
Sbjct: 61  EMYQEGRTVLRDAGFRQYEVSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGG 120

Query: 291 HRVAISIEK-HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           H     I+   P++W+K V   GH   +   L   +  +E L MGLR   G++ + W+  
Sbjct: 121 HTREARIQTLEPDNWMKEVTLFGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQF 180


>gi|289522844|ref|ZP_06439698.1| coproporphyrinogen dehydrogenase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503868|gb|EFD25032.1| coproporphyrinogen dehydrogenase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 346

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 11/296 (3%)

Query: 49  ENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           + F+     E++ W     G     +++ GGGTP+L+       ++  + +       +E
Sbjct: 9   DKFMNCLDEELKLWAALAGGKIKAQTLYIGGGTPTLLNHWQWERLISSLERYVDFLPFLE 68

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
            ++EANP S+  ++ + +R   + R+SLGVQSL++  L+ L R H+A +A  AI      
Sbjct: 69  ASVEANPGSLTADHIKLWRSWRITRVSLGVQSLDDGELQLLKRPHSAHDAADAIAALVAS 128

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +S DLI+ LP QT+  W   L+  L++ + HLS+Y+LT+E+GT +      G+    
Sbjct: 129 GLEVSVDLIFGLPGQTIQSWHRTLKDCLNFGIRHLSIYELTLEEGTSW------GECPPS 182

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
                  LY   Q      G   YEI++ S       HN+ YW+  +++G+GP A   + 
Sbjct: 183 GLTEGYPLYRFAQWYLPKKGFIQYEIASFSLPRHWCRHNIAYWQGENFLGVGPSAWGYLN 242

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
              +     I+ +       +      V  +E L  ++QA E  ++ LR R G++ 
Sbjct: 243 GFRYGNTREIKDY----FDQITSEKLPVAYQEILPQDKQATEAAILALRTRWGVTA 294


>gi|156972903|ref|YP_001443810.1| coproporphyrinogen III oxidase [Vibrio harveyi ATCC BAA-1116]
 gi|156524497|gb|ABU69583.1| hypothetical protein VIBHAR_00581 [Vibrio harveyi ATCC BAA-1116]
          Length = 463

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 119/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R ++ + FGGGTP+ +    I  ++D + + +T S++ EI+IE +P  +E+    
Sbjct: 104 SLLGERQVTQLHFGGGTPTFLSENQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|153951392|ref|YP_001398180.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938838|gb|ABS43579.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. doylei 269.97]
          Length = 355

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 151/337 (44%), Gaps = 40/337 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLT-GPRSIS 72
           +  Y+H PFC  KC YC F S      + + ++ +++   ++      ++Q       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTS------LKKNDYEKAYFKALKKDIIFQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVDAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS G QS   + L FLGR HN    I A+  A    F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGAQSFHPKKLHFLGRIHNQEMIIKALENANKAGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LHLKKIKALITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLIKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               YEISN S   ++   HNL YW+  +Y+  G  A    +      A +++ + E+  
Sbjct: 223 DFFQYEISNFSKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN-- 280

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                        E LSS+    E L +GLR   GI 
Sbjct: 281 -------PTFRSIEQLSSKDLNLEHLFLGLRSIVGID 310


>gi|213024817|ref|ZP_03339264.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 323

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 12  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 72  GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 131

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 132 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 192 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 235


>gi|149173343|ref|ZP_01851973.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
 gi|148847525|gb|EDL61858.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
          Length = 436

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 188/390 (48%), Gaps = 24/390 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISS 73
           S  +G+Y+H PFC K+C +C F  + ++     E ++Q+   E + + Q+     R++  
Sbjct: 44  SIPMGLYIHIPFCRKRCKFCYFRVYEKQNAKTIERYVQALQQEFEMLSQVEAIKGRTLDF 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            +FGGGTPS +  + +  + D ++   +  +  E+T E  P ++     +  ++ G+ RI
Sbjct: 104 TYFGGGTPSYLSSKQLLSVRDRLSSLLSWETAKEVTFECEPGTLNQEKVETLKEIGITRI 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGV+S  ++ L   GR H   E   A    + + FP+++ DLI  +  +T   W   ++
Sbjct: 164 SLGVESFNDKLLEANGRAHLTPEVYKAYDWIQQVGFPQVNIDLIAGMMGETDENWSESVE 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS--AHGLHA 250
           +A  +A D++++YQ+ +   T+  K  K+  L  P  +       + ++I +  A G H 
Sbjct: 224 KAAEFAPDNITIYQMELPHNTIISKEMKEMGLTSPIADWTTKRRWMNEAIETLQAKGYHL 283

Query: 251 YEISNHSFLGAES---LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
               N      E+   ++  N +R  D I  G  +   ++ G H   +      E +L+ 
Sbjct: 284 AS-GNELVKNPETDRFVYRDNLFRGNDIIATGVSSFGHMQ-GVHYQNLD---RLEDYLET 338

Query: 308 VRKNGHAVVEKEFLSSEQQ--ADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECE---RN 361
           V K G   + +    SE Q    EF+   L+L+EG +  + ++   G +L  E      N
Sbjct: 339 VEK-GDLPINRALEPSEHQRLIREFI---LQLKEGRVLTQPFKDKFGVDLTEEFSEALEN 394

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
            Q+ G++   + ++++ T++GM   DS++ 
Sbjct: 395 QQKAGYLTYDE-AQVKLTRKGMLQADSLLT 423


>gi|326625715|gb|EGE32060.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 459

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 235 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 278


>gi|167551518|ref|ZP_02345273.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168244250|ref|ZP_02669182.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168467333|ref|ZP_02701170.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194443776|ref|YP_002043226.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448265|ref|YP_002048007.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197262083|ref|ZP_03162157.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198243649|ref|YP_002217925.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207859196|ref|YP_002245847.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|194402439|gb|ACF62661.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194406569|gb|ACF66788.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195630221|gb|EDX48861.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197240338|gb|EDY22958.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197938165|gb|ACH75498.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|205323686|gb|EDZ11525.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205336920|gb|EDZ23684.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|206710999|emb|CAR35367.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
          Length = 457

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|222823673|ref|YP_002575247.1| oxygen-independent coproporphyrinogen III oxidase HemN,
           [Campylobacter lari RM2100]
 gi|222538895|gb|ACM63996.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Campylobacter lari RM2100]
          Length = 349

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 131/265 (49%), Gaps = 17/265 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGG 78
           +Y+H PFC  KC YC F S   + K  +++++ + + ++++          SI ++F GG
Sbjct: 3   LYIHIPFCESKCFYCSFTS--LKKKDFEKDYLNALMQDIKYQLDFFKLDKNSIKTVFIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++      I   I   + +  + E++IEANP+S  ++  +  +  G NRIS G Q
Sbjct: 61  GTPSLMDASFYEKIF--IFLQYYLQKDSEVSIEANPNSSNLSWLKEIKNLGFNRISFGAQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E+ L+FLGR H+      +I  A+   F  ++ DLIY          + E+ +    
Sbjct: 119 SFHEKKLQFLGRIHDQKSIFTSIENAKKAGFDIINLDLIYDTKLDDKKMLDYEISKLTLL 178

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S Y LTIE+ T      K        +N      +  ++I +  G   YEISN  
Sbjct: 179 DINHISAYNLTIEEKT------KFAKKFHFKKNAPRLAKHFIKAIENL-GYKQYEISN-- 229

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGA 282
             G    HNL YW+  DYIG G  A
Sbjct: 230 -FGQICKHNLAYWQGKDYIGCGLSA 253


>gi|16762428|ref|NP_458045.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16767269|ref|NP_462884.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29143916|ref|NP_807258.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|161617126|ref|YP_001591091.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167995109|ref|ZP_02576199.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237618|ref|ZP_02662676.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168263105|ref|ZP_02685078.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|194737499|ref|YP_002116924.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|204930367|ref|ZP_03221344.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|213162856|ref|ZP_03348566.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425464|ref|ZP_03358214.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213612841|ref|ZP_03370667.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|238913944|ref|ZP_04657781.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289829359|ref|ZP_06546971.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|60392332|sp|P0A1E1|HEMN_SALTY RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|60392333|sp|P0A1E2|HEMN_SALTI RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|25284567|pir||AD0950 oxygen-independent coproporphyrinogen III oxidase [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|509500|gb|AAA19690.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16422566|gb|AAL22843.1| O2-independent coproporphyrinogen III oxidase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16504733|emb|CAD03096.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29139552|gb|AAO71118.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|161366490|gb|ABX70258.1| hypothetical protein SPAB_04966 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194713001|gb|ACF92222.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197289446|gb|EDY28811.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|204320771|gb|EDZ05973.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205327147|gb|EDZ13911.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205348306|gb|EDZ34937.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|261249120|emb|CBG26981.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267996287|gb|ACY91172.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160511|emb|CBW20041.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312915117|dbj|BAJ39091.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225288|gb|EFX50346.1| Coproporphyrinogen III oxidase, oxygen-independent [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322613074|gb|EFY10024.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619145|gb|EFY16028.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322626011|gb|EFY22823.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626531|gb|EFY23337.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632358|gb|EFY29106.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635162|gb|EFY31883.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642761|gb|EFY39350.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647926|gb|EFY44398.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650676|gb|EFY47077.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652859|gb|EFY49196.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657174|gb|EFY53454.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662340|gb|EFY58555.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666875|gb|EFY63051.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672145|gb|EFY68260.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675867|gb|EFY71939.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681719|gb|EFY77745.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684088|gb|EFY80097.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323193360|gb|EFZ78575.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197717|gb|EFZ82850.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323200711|gb|EFZ85782.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207286|gb|EFZ92238.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211488|gb|EFZ96329.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323218468|gb|EGA03176.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221052|gb|EGA05484.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226027|gb|EGA10246.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231707|gb|EGA15819.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236046|gb|EGA20124.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239534|gb|EGA23583.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243874|gb|EGA27885.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249236|gb|EGA33153.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250522|gb|EGA34405.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258976|gb|EGA42628.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260221|gb|EGA43844.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265340|gb|EGA48837.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270562|gb|EGA54008.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|332990832|gb|AEF09815.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 457

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|168232927|ref|ZP_02657985.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472858|ref|ZP_03078842.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194459222|gb|EDX48061.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205332848|gb|EDZ19612.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 457

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|213417296|ref|ZP_03350440.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 443

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|56415850|ref|YP_152925.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364780|ref|YP_002144417.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56130107|gb|AAV79613.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197096257|emb|CAR61855.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 457

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|163802219|ref|ZP_02196114.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
 gi|159174024|gb|EDP58834.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
          Length = 463

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   +      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  IADYDMACSHYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R+++ + FGGGTP+ +  + I  ++D + + +T SS+ EI+IE +P  +E+    
Sbjct: 104 SLLGKRTVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSSDAEISIEVDPREIELTVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRGEGFNRLSIGVQDFNKEVQQLVNREQDEAFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+    L  
Sbjct: 224 TKGSFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI----LQD 278

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +I +  G      S + F+G +
Sbjct: 279 TIATLTG------SGYQFIGMD 294


>gi|153871923|ref|ZP_02000966.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
 gi|152071613|gb|EDN69036.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
          Length = 435

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 166/362 (45%), Gaps = 11/362 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRS 70
           G  +  L +Y+H P+C +KC YC + +     K   + ++ +   E+++   R     R 
Sbjct: 47  GTENKPLNIYLHIPYCAQKCAYCYYRTIQGSRKSETDRYVDALCKEIEFASERFHLKNRP 106

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SI+FGGGTP+L++  N++ I++ + K+       E+++EA P ++        +K  V
Sbjct: 107 IESIYFGGGTPTLLDENNLSQIVETLHKHLNTKQPHELSVEAEPVTLTQRKADALKKLKV 166

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NRIS+GVQSL +  ++   R     +AI AI +AR+    ++ DL+  L  +    +   
Sbjct: 167 NRISMGVQSLCDDIIKHTDRQDTEKKAIRAIEIARSTGAVVNIDLMSGLAGENKDTFSYS 226

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + RAL   V+ +++Y+  +   T +Y   ++  L LP++   ++                
Sbjct: 227 VNRALESGVESITVYKTELYANTKYYMRIRNEGLDLPTDEQELEFMQYAMDKLEEANYLP 286

Query: 251 YEISNHSFLGAES-LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +     +  G  + +H+ N +R  DY   G  A  R+      V        E ++ ++ 
Sbjct: 287 WSFFTFTKGGKYTHVHSPNVFRGEDYYAFGASAFGRLG----NVLFQNTNESEKYIDILE 342

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQG 366
                +     L+S  Q    +++G++L   + +  ++   G  L+  C     +LQ  G
Sbjct: 343 AGELPISRGHHLTSMDQMVRDVVLGMKLVR-LDLNRFQNKYGFRLESLCAPTVESLQADG 401

Query: 367 FI 368
           F+
Sbjct: 402 FV 403


>gi|205354413|ref|YP_002228214.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205274194|emb|CAR39211.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
          Length = 457

 Score =  122 bits (307), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|213647955|ref|ZP_03378008.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 424

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|200388327|ref|ZP_03214939.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199605425|gb|EDZ03970.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 457

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFANRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|213852341|ref|ZP_03381873.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 305

 Score =  122 bits (306), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|323132345|gb|ADX19775.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 485

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 81  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 140

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 141 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 200

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 201 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 260

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 261 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 304


>gi|326629544|gb|EGE35887.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 485

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 81  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 140

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 141 GTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 200

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 201 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 260

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 261 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 304


>gi|197248034|ref|YP_002148923.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197211737|gb|ACH49134.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 485

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 81  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 140

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 141 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 200

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 201 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 260

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 261 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 304


>gi|170769624|ref|ZP_02904077.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia
           albertii TW07627]
 gi|170121432|gb|EDS90363.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia
           albertii TW07627]
          Length = 457

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIIHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  + + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNVDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A +H AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLHHAREIGFTSTNIDLIYGLPKQTPESFSFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|12004558|gb|AAG44089.1|AF215908_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +N+  +Y+H PFC   C YCDF   VR+     E  +  +L ++  + +++G      +I
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDF---VRKIPSSNEE-VDLYLEKI--VDEISGFFNKCKTI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+S
Sbjct: 56  YIGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVS 113

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  E+ LR L R H       AI+L  ++    +S D IY LP   ++     ++ 
Sbjct: 114 LGVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINESIEF 173

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + H+S Y L I+ G++  K ++  D +   E+    + N+ + I    G   YE+
Sbjct: 174 IKRNNIKHVSFYALEIKDGSIMNKRNEVID-IETEEDQLEHIENVMEKI----GYTRYEV 228

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN S      S HNL YW   D+  IG GA+   K   ++       +  S+L   +KN 
Sbjct: 229 SNWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQ-------NYGSYLNYYKKNQ 281

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +   +  +L         LMMGLR  +GI +
Sbjct: 282 NWKQKDIYLY-------ILMMGLRKIDGIDL 305


>gi|62182466|ref|YP_218883.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62130099|gb|AAX67802.1| O2-independent coproporphyrinogen III oxidase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
          Length = 457

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  ++++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIDLDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 276


>gi|12004566|gb|AAG44093.1|AF215912_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +N+  +Y+H PFC   C YCDF   VR+     E  +  +L ++  + +++G      +I
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDF---VRKIPSSNEE-VDLYLEKI--VDEISGFFNKCKTI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+S
Sbjct: 56  YIGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVS 113

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  E+ LR L R H       AI+L  ++    +S D IY LP   ++     ++ 
Sbjct: 114 LGVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINESIEF 173

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + H+S Y L I+ G++  K ++  D +   E+    + N+ + I    G   YE+
Sbjct: 174 IKRNNIKHVSFYALEIKDGSIMNKRNEVID-IETEEDQLEHIENVMEKI----GYTRYEV 228

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN S      S HNL YW   D+  IG GA+   K   ++       +  S+L   +KN 
Sbjct: 229 SNWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQ-------NYGSYLNYYKKNQ 281

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +   +  +L         LMMGLR  +GI +
Sbjct: 282 NWNQKDIYLY-------ILMMGLRKIDGIDL 305


>gi|161505497|ref|YP_001572609.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160866844|gb|ABX23467.1| hypothetical protein SARI_03656 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 457

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 20/325 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFSQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRQVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEIDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +       ++ ARNI F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEELIFMLLNHARNIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-----NL 238
              +   LQR      D LS++       TLF    K  +  LPS    +D+      +L
Sbjct: 219 PESFAFTLQRVTELNPDRLSVFNYA-HLPTLFAAQRKIKNTDLPSAQQKLDILQETIVSL 277

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           TQ+     G+  +   +     A+   +LH  N+  Y      D +G+G  A S +  G 
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGALHR-NFQGYTTQGDTDLLGMGVSAISMIGDGY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAV 315
               +  +K  + + + V   G+A+
Sbjct: 337 ----MQNQKELKRYYQQVNARGNAL 357


>gi|90019114|gb|ABD84210.1| unknown [Yersinia sp. MH-1]
          Length = 158

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 1/155 (0%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           +  V  + ++   L ++     LT  R I +IF GGGTPSL+  + +  +LDG+     V
Sbjct: 3   KGDVPHQEYVDHLLADLDADLPLTSGREIGTIFIGGGTPSLLSAEAMQSLLDGVRARLPV 62

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +++ EIT+EANP +VE + F GY++AGVNRIS+GVQS  EQ L  LGR H   EA  A  
Sbjct: 63  AADAEITMEANPGTVEADRFSGYQRAGVNRISIGVQSFNEQKLVRLGRIHGPEEAKRAAA 122

Query: 163 LARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           LA ++  R  + DL++ LP Q + +   +L++A++
Sbjct: 123 LATSLGLRSFNLDLMHGLPDQMLEEALDDLRQAIA 157


>gi|8671347|emb|CAB95030.1| oxygen independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus]
          Length = 294

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 137/282 (48%), Gaps = 26/282 (9%)

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQWE 188
           SLG QS +++ L  LGR H A++ + A       F        S DLI  LP Q +  WE
Sbjct: 4   SLGAQSFDDKVLAQLGRRHTANDLLDACGWINQAFNERKLFSWSLDLIQNLPGQDLCSWE 63

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +AL  +  H+S+Y L+IEKGT+F      G+L LP+E+ A D+  +T       G 
Sbjct: 64  KQLLKALDISPPHMSIYDLSIEKGTVFEWRQNRGELSLPNEDDASDMSKMTSDKLKQAGF 123

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN++  G  S HN  YW    + G G GA S    G         +  + WL++ 
Sbjct: 124 SRYEISNYALPGHASRHNRVYWSGSGWWGFGQGATS-CPWGVRSSRPRTREKYKKWLEVQ 182

Query: 309 RKNGHAVVEKEF-LSSEQQ---ADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQ 363
             +G   ++K   L++E Q    DE L+ GLR REGI  K  E+++  N D  + E NL 
Sbjct: 183 ENDG---LDKSLTLNNEGQLIPLDELLIFGLRRREGIDFK--ELVSSFNWDESQLEINLN 237

Query: 364 ----------RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                     ++G I++  +        GM + + ++ ++ +
Sbjct: 238 NLKNYWANSLKEGLIKQRGYRFYLTDPHGMDLSNQILVDMLL 279


>gi|91224951|ref|ZP_01260210.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
 gi|91190197|gb|EAS76467.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
          Length = 463

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  ++  + + +T SS+ EI+IE +P  +E+    
Sbjct: 104 ALLASRTVTQLHFGGGTPTFLSEKQITRVMSLLRQEFTFSSDAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDDDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|12004562|gb|AAG44091.1|AF215910_1 species protein 1 [Mycoplasma iowae]
 gi|12004564|gb|AAG44092.1|AF215911_1 species protein 1 [Mycoplasma iowae]
 gi|12004568|gb|AAG44094.1|AF215913_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +N+  +Y+H PFC   C YCDF   VR+     E  +  +L ++  + +++G      +I
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDF---VRKIPSSNEE-VDLYLEKI--VDEISGFFNKCKTI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+S
Sbjct: 56  YIGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVS 113

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  E+ LR L R H       AI+L  ++    +S D IY LP   ++     ++ 
Sbjct: 114 LGVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINDSIEF 173

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + H+S Y L I+ G++  K ++  D +   E+    + N+ + I    G   YE+
Sbjct: 174 IKRNNIKHVSFYALEIKDGSIMNKRNEIID-IETEEDQLEHIENVMEKI----GYTRYEV 228

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN S      S HNL YW   D+  IG GA+   K   ++       +  S+L   +KN 
Sbjct: 229 SNWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQ-------NYGSYLNYYKKNQ 281

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +   +  +L         LMMGLR  +GI +
Sbjct: 282 NWNQKDIYLY-------ILMMGLRKIDGIDL 305


>gi|12004560|gb|AAG44090.1|AF215909_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +N+  +Y+H PFC   C YCDF   VR+     E  +  +L ++  + +++G      +I
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDF---VRKIPSSNEE-VDLYLEKI--VDEISGFFNKCKTI 55

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+S
Sbjct: 56  YIGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVS 113

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  E+ LR L R H       AI+L  ++    +S D IY LP   ++     ++ 
Sbjct: 114 LGVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINESIEF 173

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + H+S Y L I+ G++  K ++  D +   E+    + N+ + I    G   YE+
Sbjct: 174 IKRNNIKHVSFYALEIKDGSIMNKRNEVID-IETEEDQLEHIENVMEKI----GYTRYEV 228

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN S      S HNL YW   D+  IG GA+   K   ++       +  S+L   +KN 
Sbjct: 229 SNWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQ-------NYGSYLNYYKKNQ 281

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +   +  +L         LMMGLR  +GI +
Sbjct: 282 NWNQKDIYLY-------ILMMGLRKIDGIDL 305


>gi|322716960|gb|EFZ08531.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 485

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 81  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 140

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  ++++     R  G NR+S+GVQ
Sbjct: 141 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIDLDVLDHLRAEGFNRLSMGVQ 200

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 201 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 260

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 261 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVS 304


>gi|224585814|ref|YP_002639613.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224470342|gb|ACN48172.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 485

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 15/262 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 81  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFADRHVSQLHWGG 140

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  ++++     R  G NR+S+GVQ
Sbjct: 141 GTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIDLDVLDHLRAEGFNRLSMGVQ 200

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 201 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLKRVTEL 260

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D LS++       TLF    K  D  LPS    +D+  L ++I S         + + 
Sbjct: 261 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIVSLTQ------AGYQ 311

Query: 258 FLGAESLHNLNYWRYGDYIGIG 279
           F+G +     ++ R GD + + 
Sbjct: 312 FIGMD-----HFARPGDELAVA 328


>gi|284931180|gb|ADC31118.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str. F]
          Length = 348

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 32/328 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H P C K C +CDF    +R  + + N    +Q  + E++  R+       SSI+ G
Sbjct: 5   LYIHLPLCQKICTFCDF----KRELIDRHNPKKVVQDLVDEIE--RKQFSDEQFSSIYLG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ + + +   L  I K    +   E TIE NP  V  +  Q  +K  VNR S+G+
Sbjct: 59  GGTPNVFDDELLDYFLSKIKK--YAAKTCEFTIECNPDLVTKSQAQILKKNLVNRASVGI 116

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q +  + L++L R H+ +    A+ +L       ++ DL+YALP          ++    
Sbjct: 117 QIVNNKILKYLNRTHDINHCYEAMQNLYDAGITNINIDLMYALPHMKKEDVLENIKFIKK 176

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L ++ G    K     DL    +  A+ L  +   +        YE++N 
Sbjct: 177 TKPNHISFYGLDLKPGAYLTKTPYKIDL----DQEAMQLRVMKAELNKI-NYKRYEVANW 231

Query: 257 SFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
             L   +S+HN  YW   DY  IG GAH       ++V    +   ++W   ++KN    
Sbjct: 232 CRLKKYQSVHNKAYWLTKDYAAIGWGAHG----FENKVEYYYDGSIQNW--QIKKNR--- 282

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISV 343
                L+ EQ     L+MGLRL++G+ +
Sbjct: 283 -----LTDEQFYQRVLIMGLRLKDGVDI 305


>gi|323974269|gb|EGB69398.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TW10509]
          Length = 457

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R IS + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHISQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEDFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|163814886|ref|ZP_02206274.1| hypothetical protein COPEUT_01037 [Coprococcus eutactus ATCC 27759]
 gi|158449825|gb|EDP26820.1| hypothetical protein COPEUT_01037 [Coprococcus eutactus ATCC 27759]
          Length = 521

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 22/286 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC  +C YC F S+ +  YK   E ++ +   EM+++ +    + + SI+ GGG
Sbjct: 197 LYIGIPFCPTRCLYCSFTSYPIAVYKDKVEAYLDALEKEMEYVAEAYSRKKLISIYIGGG 256

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TPS I  +N+  +   I + + +S   E TIEA  P S   +     +K GV RIS+  Q
Sbjct: 257 TPSSISAENMDRLCGMIERAFDLSYVREFTIEAGRPDSTTYDKLAVMKKHGVTRISINPQ 316

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ EQ+LR +GR H   +   A+ +AR + F  ++ DLI  LP +     E  L++    
Sbjct: 317 TMNEQTLRTIGRAHTPDQTREAMEMARRVGFDNINMDLIVGLPGEDTDAVENTLRQIREL 376

Query: 198 AVDHLSLYQLTIEK-GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           A + L+++ L +++  TL  +M +  DL+    ++   L  +T++     GL  Y +   
Sbjct: 377 APESLTVHTLAVKRAATLNIEMDRYKDLL--KNDIESQLDAVTRA-ADDMGLSPYYLYRQ 433

Query: 257 SFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRVKV 288
             +   +L N+ Y + G              D +G+G G+ S++ V
Sbjct: 434 KNMTG-NLENVGYSKEGLECLYNILIMEERTDIVGLGAGSSSKLVV 478


>gi|269964585|ref|ZP_06178824.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           alginolyticus 40B]
 gi|269830712|gb|EEZ84932.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           alginolyticus 40B]
          Length = 463

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 16/297 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  ++  + + +T SS+ EI+IE +P  +E+    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMSLLRQEFTFSSDAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    +A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKESFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSAH----GLHAYEISNHSFLGA--ESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           ++T A     G+  + + +     A  E + + N+  Y      D +G G  A S +
Sbjct: 282 TLTGAGYQFIGMDHFALPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMI 338


>gi|293413301|ref|ZP_06655962.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B354]
 gi|291468049|gb|EFF10547.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B354]
          Length = 457

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPKSFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|222035579|emb|CAP78324.1| Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           LF82]
 gi|312948436|gb|ADR29263.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 457

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|301023830|ref|ZP_07187564.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 69-1]
 gi|300396878|gb|EFJ80416.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 69-1]
          Length = 457

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|281180930|dbj|BAI57260.1| coproporphyrinogen III oxidase [Escherichia coli SE15]
          Length = 457

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|331675326|ref|ZP_08376076.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA280]
 gi|331067386|gb|EGI38791.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA280]
          Length = 459

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|148683982|gb|EDL15929.1| radical S-adenosyl methionine domain containing 1, isoform CRA_b
           [Mus musculus]
          Length = 246

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 4/178 (2%)

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +  LP Q +  W  +LQ+ L +  DHLSLYQLT+E+GT  +   + G L  P  ++A ++
Sbjct: 1   MLGLPAQKVEPWLQQLQKLLYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEM 60

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHR 292
           Y   +++    G   YE+SN +  GA S HN  YW+ G Y+GIGPGAH R      G H 
Sbjct: 61  YQEGRTVLRDAGFRQYEVSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGGHT 120

Query: 293 VAISIEK-HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
               I+   P++W+K V   GH   +   L   +  +E L MGLR   G++ + W+  
Sbjct: 121 REARIQTLEPDNWMKEVTLFGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQF 178


>gi|331665515|ref|ZP_08366413.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA143]
 gi|331057200|gb|EGI29190.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA143]
          Length = 457

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|283834621|ref|ZP_06354362.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           youngae ATCC 29220]
 gi|291069532|gb|EFE07641.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           youngae ATCC 29220]
          Length = 457

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 4/240 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A+ N +       L +YVH PFC K C +C  N  V R +   + ++     E+     L
Sbjct: 40  AFLNAVARYPERPLSLYVHIPFCHKLCYFCGCNKVVTRQQHKADQYLDVLEQEIIHRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R +S + +GGGTP+ +    I+ ++  +  N+  +++ EI+IE +P  +E++     
Sbjct: 100 FAGRHVSQLHWGGGTPTYLNKAQISRLMSLLRGNFNFNADAEISIEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R      D LS++       TLF    K  D  LPS    +D+  L ++I+S
Sbjct: 220 ESFAFTLKRVAELNPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETISS 276


>gi|31544373|ref|NP_852951.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(low)]
 gi|31541217|gb|AAP56519.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930415|gb|ADC30354.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(high)]
          Length = 348

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 151/328 (46%), Gaps = 32/328 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H P C K C +CDF    +R  + + N    +Q  + E++  R+       SSI+ G
Sbjct: 5   LYIHLPLCQKICTFCDF----KRELIDRHNPKKVVQDLIDEIE--RKQFSDEQFSSIYLG 58

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ + + +   L  I K    +   E TIE NP  V  +  Q  +K  VNR S+G+
Sbjct: 59  GGTPNVFDDELLDYFLSKIKK--YAAKKCEFTIECNPDLVTKSQAQILKKNLVNRASVGI 116

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q +  + L++L R H+ +    A+ +L       ++ DL+YALP          ++    
Sbjct: 117 QIVNNKILKYLNRTHDINHCYEAMQNLYDAGITNINIDLMYALPHMKKEDVLENIKFIKK 176

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L ++ G    K     DL    +  A+ L  +   +        YE++N 
Sbjct: 177 TKPNHISFYGLDLKPGAYLTKTPYKIDL----DQEAMQLRVMKAELNKI-NYKRYEVANW 231

Query: 257 SFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
             L   +S+HN  YW   DY  IG GAH       ++V    +   ++W           
Sbjct: 232 CRLKKYQSVHNKAYWLTKDYAAIGWGAHG----FENKVEYYYDGSIQNW----------Q 277

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISV 343
           ++K  L+ +Q     L+MGLRL++G+ +
Sbjct: 278 IKKNRLTDDQFYQRVLIMGLRLKDGVDI 305


>gi|332084076|gb|EGI89281.1| oxygen-independent coproporphyrinogen III oxidase [Shigella boydii
           5216-82]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|293417327|ref|ZP_06659951.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291430847|gb|EFF03843.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|320174860|gb|EFW49981.1| Coproporphyrinogen III oxidase, oxygen-independent [Shigella
           dysenteriae CDC 74-1112]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|38704208|ref|NP_312816.2| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|89110161|ref|AP_003941.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111657|ref|NP_418303.2| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157159135|ref|YP_001465348.1| coproporphyrinogen III oxidase [Escherichia coli E24377A]
 gi|157163337|ref|YP_001460655.1| coproporphyrinogen III oxidase [Escherichia coli HS]
 gi|161984816|ref|YP_410158.2| coproporphyrinogen III oxidase [Shigella boydii Sb227]
 gi|161986407|ref|YP_312791.2| coproporphyrinogen III oxidase [Shigella sonnei Ss046]
 gi|168748853|ref|ZP_02773875.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755535|ref|ZP_02780542.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761767|ref|ZP_02786774.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4501]
 gi|168768152|ref|ZP_02793159.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4486]
 gi|168775317|ref|ZP_02800324.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780770|ref|ZP_02805777.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786707|ref|ZP_02811714.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC869]
 gi|168799571|ref|ZP_02824578.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC508]
 gi|170022119|ref|YP_001727073.1| coproporphyrinogen III oxidase [Escherichia coli ATCC 8739]
 gi|170083339|ref|YP_001732659.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187730229|ref|YP_001882565.1| coproporphyrinogen III oxidase [Shigella boydii CDC 3083-94]
 gi|188494005|ref|ZP_03001275.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           53638]
 gi|191166403|ref|ZP_03028234.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B7A]
 gi|193063904|ref|ZP_03044990.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E22]
 gi|193068087|ref|ZP_03049052.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E110019]
 gi|194428658|ref|ZP_03061195.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B171]
 gi|194435183|ref|ZP_03067414.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1012]
 gi|194438292|ref|ZP_03070383.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           101-1]
 gi|195937504|ref|ZP_03082886.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808451|ref|ZP_03250788.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4206]
 gi|208812970|ref|ZP_03254299.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820972|ref|ZP_03261292.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4042]
 gi|209396387|ref|YP_002273383.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4115]
 gi|217326436|ref|ZP_03442520.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. TW14588]
 gi|218556426|ref|YP_002389340.1| coproporphyrinogen III oxidase [Escherichia coli IAI1]
 gi|218697580|ref|YP_002405247.1| coproporphyrinogen III oxidase [Escherichia coli 55989]
 gi|238902934|ref|YP_002928730.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli BW2952]
 gi|253775498|ref|YP_003038329.1| coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163818|ref|YP_003046926.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|254795858|ref|YP_003080695.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021504|ref|ZP_05435369.1| coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|256026100|ref|ZP_05439965.1| coproporphyrinogen III oxidase [Escherichia sp. 4_1_40B]
 gi|260846365|ref|YP_003224143.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O103:H2 str. 12009]
 gi|260870583|ref|YP_003236985.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O111:H- str. 11128]
 gi|261223493|ref|ZP_05937774.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257256|ref|ZP_05949789.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285277|ref|YP_003502095.1| Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O55:H7 str. CB9615]
 gi|293470178|ref|ZP_06664589.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|300819246|ref|ZP_07099446.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 107-1]
 gi|300823688|ref|ZP_07103814.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 119-7]
 gi|300906184|ref|ZP_07123896.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 84-1]
 gi|300919050|ref|ZP_07135594.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 115-1]
 gi|300925944|ref|ZP_07141778.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 182-1]
 gi|300931700|ref|ZP_07147007.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 187-1]
 gi|300948169|ref|ZP_07162298.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 116-1]
 gi|300957297|ref|ZP_07169524.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 175-1]
 gi|301027908|ref|ZP_07191199.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 196-1]
 gi|301303335|ref|ZP_07209459.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 124-1]
 gi|301328183|ref|ZP_07221311.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 78-1]
 gi|301648442|ref|ZP_07248173.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 146-1]
 gi|307140561|ref|ZP_07499917.1| coproporphyrinogen III oxidase [Escherichia coli H736]
 gi|307314013|ref|ZP_07593627.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|309797825|ref|ZP_07692208.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 145-7]
 gi|312971847|ref|ZP_07786021.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1827-70]
 gi|331644596|ref|ZP_08345715.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H736]
 gi|331655549|ref|ZP_08356541.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M718]
 gi|331670709|ref|ZP_08371545.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA271]
 gi|331679974|ref|ZP_08380636.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H591]
 gi|2506308|sp|P32131|HEMN_ECOLI RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1220106|dbj|BAA03961.1| hemN [Escherichia coli W3110]
 gi|85676192|dbj|BAE77442.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K12 substr.
           W3110]
 gi|87082341|gb|AAC76864.2| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157069017|gb|ABV08272.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           HS]
 gi|157081165|gb|ABV20873.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E24377A]
 gi|169757047|gb|ACA79746.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ATCC 8739]
 gi|169891174|gb|ACB04881.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187427221|gb|ACD06495.1| oxygen-independent coproporphyrinogen III oxidase [Shigella boydii
           CDC 3083-94]
 gi|187769143|gb|EDU32987.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4196]
 gi|188016759|gb|EDU54881.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4113]
 gi|188489204|gb|EDU64307.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           53638]
 gi|189001408|gb|EDU70394.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357108|gb|EDU75527.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362689|gb|EDU81108.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4486]
 gi|189367897|gb|EDU86313.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373340|gb|EDU91756.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC869]
 gi|189378080|gb|EDU96496.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC508]
 gi|190903503|gb|EDV63221.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B7A]
 gi|192929369|gb|EDV82977.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E22]
 gi|192958707|gb|EDV89145.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E110019]
 gi|194413241|gb|EDX29526.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B171]
 gi|194416581|gb|EDX32719.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1012]
 gi|194422729|gb|EDX38725.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           101-1]
 gi|208728252|gb|EDZ77853.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4206]
 gi|208734247|gb|EDZ82934.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4045]
 gi|208741095|gb|EDZ88777.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4042]
 gi|209157787|gb|ACI35220.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4115]
 gi|217322657|gb|EEC31081.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. TW14588]
 gi|218354312|emb|CAV01023.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli 55989]
 gi|218363195|emb|CAR00837.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli IAI1]
 gi|238860613|gb|ACR62611.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli BW2952]
 gi|242379404|emb|CAQ34218.1| coproporphyrinogen III dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253326542|gb|ACT31144.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975719|gb|ACT41390.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|253979875|gb|ACT45545.1| coproporphyrinogen III oxidase [Escherichia coli BL21(DE3)]
 gi|254595258|gb|ACT74619.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O157:H7 str.
           TW14359]
 gi|257761512|dbj|BAI33009.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O103:H2 str. 12009]
 gi|257766939|dbj|BAI38434.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O111:H- str. 11128]
 gi|260451298|gb|ACX41720.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           DH1]
 gi|290765150|gb|ADD59111.1| Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O55:H7 str. CB9615]
 gi|291321388|gb|EFE60827.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|299878990|gb|EFI87201.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 196-1]
 gi|300315954|gb|EFJ65738.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 175-1]
 gi|300401986|gb|EFJ85524.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 84-1]
 gi|300413830|gb|EFJ97140.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 115-1]
 gi|300417999|gb|EFK01310.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 182-1]
 gi|300452286|gb|EFK15906.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 116-1]
 gi|300460539|gb|EFK24032.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 187-1]
 gi|300523750|gb|EFK44819.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 119-7]
 gi|300528132|gb|EFK49194.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 107-1]
 gi|300841289|gb|EFK69049.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 124-1]
 gi|300845320|gb|EFK73080.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 78-1]
 gi|301073485|gb|EFK88291.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 146-1]
 gi|306906330|gb|EFN36846.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|308118581|gb|EFO55843.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 145-7]
 gi|309704292|emb|CBJ03641.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ETEC H10407]
 gi|310334224|gb|EFQ00429.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1827-70]
 gi|315063152|gb|ADT77479.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli W]
 gi|315138435|dbj|BAJ45594.1| O2-independent coproporphyrinogen III oxidase [Escherichia coli
           DH1]
 gi|315254231|gb|EFU34199.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 85-1]
 gi|315618767|gb|EFU99351.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           3431]
 gi|320182139|gb|EFW57042.1| Coproporphyrinogen III oxidase, oxygen-independent [Shigella boydii
           ATCC 9905]
 gi|320185492|gb|EFW60260.1| Coproporphyrinogen III oxidase, oxygen-independent [Shigella
           flexneri CDC 796-83]
 gi|320191042|gb|EFW65692.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli O157:H7 str. EC1212]
 gi|320198933|gb|EFW73531.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli EC4100B]
 gi|320639204|gb|EFX08831.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320644592|gb|EFX13646.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str.
           493-89]
 gi|320649916|gb|EFX18424.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H
           2687]
 gi|320655223|gb|EFX23169.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660850|gb|EFX28296.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666009|gb|EFX33028.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323161072|gb|EFZ46990.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E128010]
 gi|323167493|gb|EFZ53200.1| oxygen-independent coproporphyrinogen III oxidase [Shigella sonnei
           53G]
 gi|323174268|gb|EFZ59895.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           LT-68]
 gi|323177876|gb|EFZ63460.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1180]
 gi|323182384|gb|EFZ67791.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1357]
 gi|323380784|gb|ADX53052.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           KO11]
 gi|323934353|gb|EGB30766.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E1520]
 gi|323939087|gb|EGB35303.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E482]
 gi|323943762|gb|EGB39859.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H120]
 gi|323959366|gb|EGB55027.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H489]
 gi|323969733|gb|EGB65016.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA007]
 gi|324115639|gb|EGC09577.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E1167]
 gi|326338130|gb|EGD61960.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli O157:H7 str. 1044]
 gi|326342576|gb|EGD66349.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli O157:H7 str. 1125]
 gi|331036058|gb|EGI08294.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H736]
 gi|331046650|gb|EGI18735.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M718]
 gi|331061964|gb|EGI33887.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA271]
 gi|331072300|gb|EGI43633.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H591]
 gi|332085160|gb|EGI90338.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 155-74]
 gi|332088568|gb|EGI93682.1| oxygen-independent coproporphyrinogen III oxidase [Shigella boydii
           3594-74]
 gi|332345857|gb|AEE59191.1| oxygen-independent coproporphyrinogen III oxidase HemN [Escherichia
           coli UMNK88]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|283787467|ref|YP_003367332.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           rodentium ICC168]
 gi|282950921|emb|CBG90598.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           rodentium ICC168]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDALEQEIRHRAPLFKGRQVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRDNFRFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A +  AR+I F   + DLIY LPKQT   +   L++    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLRHARDIGFTSTNIDLIYGLPKQTPESFAFTLKKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LP     +D+  L Q+I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPGAQQKLDI--LQQTIAS 276


>gi|91213413|ref|YP_543399.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117626140|ref|YP_859463.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|237702897|ref|ZP_04533378.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           3_2_53FAA]
 gi|331649711|ref|ZP_08350791.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M605]
 gi|91074987|gb|ABE09868.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           UTI89]
 gi|115515264|gb|ABJ03339.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           APEC O1]
 gi|226902834|gb|EEH89093.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           3_2_53FAA]
 gi|331041344|gb|EGI13494.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M605]
          Length = 459

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|254039079|ref|ZP_04873129.1| O2-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|332282743|ref|ZP_08395156.1| O2-independent coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|13364265|dbj|BAB38212.1| O2-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. Sakai]
 gi|73857849|gb|AAZ90556.1| O2-independent coproporphyrinogen III oxidase [Shigella sonnei
           Ss046]
 gi|81247622|gb|ABB68330.1| O2-independent coproporphyrinogen III oxidase [Shigella boydii
           Sb227]
 gi|209752808|gb|ACI74711.1| response regulator for gln GlnG [Escherichia coli]
 gi|209752810|gb|ACI74712.1| response regulator for gln GlnG [Escherichia coli]
 gi|209752814|gb|ACI74714.1| response regulator for gln GlnG [Escherichia coli]
 gi|209752816|gb|ACI74715.1| response regulator for gln GlnG [Escherichia coli]
 gi|226838515|gb|EEH70544.1| O2-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|332105095|gb|EGJ08441.1| O2-independent coproporphyrinogen III oxidase [Shigella sp. D9]
          Length = 459

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|215489200|ref|YP_002331631.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312969389|ref|ZP_07783591.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           2362-75]
 gi|215267272|emb|CAS11721.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312285936|gb|EFR13854.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           2362-75]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDAELPSPQQKLDILQETIAFLTQSG 281


>gi|26111062|gb|AAN83245.1|AE016770_45 Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           CFT073]
          Length = 459

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|161367479|ref|NP_290492.2| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|218550894|ref|YP_002384685.1| coproporphyrinogen III oxidase [Escherichia fergusonii ATCC 35469]
 gi|218358435|emb|CAQ91082.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia fergusonii ATCC 35469]
 gi|324111946|gb|EGC05926.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia
           fergusonii B253]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFTRRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|12518746|gb|AAG59056.1|AE005617_5 O2-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EDL933]
          Length = 459

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|323964214|gb|EGB59697.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M863]
 gi|327250495|gb|EGE62203.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           STEC_7v]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|260857735|ref|YP_003231626.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O26:H11 str. 11368]
 gi|257756384|dbj|BAI27886.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O26:H11 str. 11368]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|296105440|ref|YP_003615586.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059899|gb|ADF64637.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAPLFTGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMALLRSNFHFNDDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++ITS
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETITS 276


>gi|218560942|ref|YP_002393855.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|218692153|ref|YP_002400365.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|306813867|ref|ZP_07448043.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|331660417|ref|ZP_08361351.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA206]
 gi|331685604|ref|ZP_08386187.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H299]
 gi|218367711|emb|CAR05500.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli S88]
 gi|218429717|emb|CAR10678.2| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli ED1a]
 gi|294493709|gb|ADE92465.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           IHE3034]
 gi|305852865|gb|EFM53312.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|307628944|gb|ADN73248.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315289574|gb|EFU48967.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 110-3]
 gi|315300252|gb|EFU59489.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 16-3]
 gi|320196909|gb|EFW71531.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli WV_060327]
 gi|323189708|gb|EFZ74987.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           RN587/1]
 gi|323949361|gb|EGB45250.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H252]
 gi|323954358|gb|EGB50143.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H263]
 gi|324006853|gb|EGB76072.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 57-2]
 gi|330908185|gb|EGH36704.1| coproporphyrinogen 3 oxidase, oxygen-independent [Escherichia coli
           AA86]
 gi|331052366|gb|EGI24403.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA206]
 gi|331077075|gb|EGI48290.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H299]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|557233|emb|CAA57578.1| oxygen independent coprophorphyrinogen III oxidase [Escherichia
           coli K-12]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEV 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|161486044|ref|NP_756671.2| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|227885398|ref|ZP_04003203.1| coproporphyrinogen dehydrogenase [Escherichia coli 83972]
 gi|300976534|ref|ZP_07173517.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 45-1]
 gi|301046672|ref|ZP_07193800.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 185-1]
 gi|40889237|pdb|1OLT|A Chain A, Coproporphyrinogen Iii Oxidase (Hemn) From Escherichia
           Coli Is A Radical Sam Enzyme.
 gi|227837656|gb|EEJ48122.1| coproporphyrinogen dehydrogenase [Escherichia coli 83972]
 gi|300301373|gb|EFJ57758.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 185-1]
 gi|300410106|gb|EFJ93644.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 45-1]
 gi|307556009|gb|ADN48784.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ABU 83972]
 gi|315292782|gb|EFU52134.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 153-1]
          Length = 457

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|332997585|gb|EGK17200.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri VA-6]
          Length = 457

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|218707492|ref|YP_002415011.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293407486|ref|ZP_06651405.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298383229|ref|ZP_06992822.1| oxygen-independent coproporphyrinogen-III oxidase [Escherichia coli
           FVEC1302]
 gi|300896909|ref|ZP_07115395.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 198-1]
 gi|218434589|emb|CAR15518.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli UMN026]
 gi|284923968|emb|CBG37067.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           042]
 gi|291425403|gb|EFE98442.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298276263|gb|EFI17783.1| oxygen-independent coproporphyrinogen-III oxidase [Escherichia coli
           FVEC1302]
 gi|300359262|gb|EFJ75132.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 198-1]
          Length = 457

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|110644206|ref|YP_671936.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|191173864|ref|ZP_03035384.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           F11]
 gi|300985892|ref|ZP_07177628.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 200-1]
 gi|110345798|gb|ABG72035.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           536]
 gi|190905822|gb|EDV65441.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           F11]
 gi|300306493|gb|EFJ61013.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 200-1]
 gi|324012568|gb|EGB81787.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 60-1]
          Length = 457

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|332751657|gb|EGJ82056.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 4343-70]
 gi|332998609|gb|EGK18206.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-218]
          Length = 457

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|304972|gb|AAB03001.1| ORF_o459 [Escherichia coli str. K-12 substr. MG1655]
          Length = 459

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAXX 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|30064844|ref|NP_839015.1| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 2457T]
 gi|56480460|ref|NP_709665.2| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 301]
 gi|110807449|ref|YP_690969.1| coproporphyrinogen III oxidase [Shigella flexneri 5 str. 8401]
 gi|30043104|gb|AAP18826.1| O2-independent coproporphyrinogen III oxidase [Shigella flexneri 2a
           str. 2457T]
 gi|56384011|gb|AAN45372.2| O2-independent coproporphyrinogen III oxidase [Shigella flexneri 2a
           str. 301]
 gi|110616997|gb|ABF05664.1| O2-independent coproporphyrinogen III oxidase [Shigella flexneri 5
           str. 8401]
 gi|281603255|gb|ADA76239.1| O2-independent coproporphyrinogen III oxidase [Shigella flexneri
           2002017]
 gi|313647094|gb|EFS11549.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 2a str. 2457T]
 gi|332751494|gb|EGJ81895.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-671]
 gi|332753192|gb|EGJ83575.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 2747-71]
 gi|332764609|gb|EGJ94841.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 2930-71]
 gi|333013945|gb|EGK33307.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-304]
          Length = 457

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|332998502|gb|EGK18100.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-272]
 gi|333013997|gb|EGK33358.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-227]
          Length = 457

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|261342940|ref|ZP_05970798.1| hypothetical protein ENTCAN_09538 [Enterobacter cancerogenus ATCC
           35316]
 gi|288314687|gb|EFC53625.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cancerogenus ATCC 35316]
          Length = 457

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 114/229 (49%), Gaps = 3/229 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAPLFAGRQVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMTLLRGNFRFNDDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESFAFTLRRVAKL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
             D LS++       TLF    K  D  LPS    +D+   T  S+T A
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDILQETIASLTEA 280


>gi|311281670|ref|YP_003943901.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
 gi|308750865|gb|ADO50617.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
          Length = 457

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 4/241 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  ++     SL +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  AAFQLAVSRYPERSLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDVLEQEILHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+    + EI+IE +P  +E++    
Sbjct: 99  LFNGRHVSQLHWGGGTPTYLNKAQISRLMRLLRENFHFRDDAEISIEVDPREIELDVLDC 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRQEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L R      D LS++       TLF    K  D  LPS    +D+  L ++I 
Sbjct: 219 PESFAFTLSRVAELNPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIA 275

Query: 244 S 244
           S
Sbjct: 276 S 276


>gi|253987658|ref|YP_003039014.1| coproporphyrinogen III oxidase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779108|emb|CAQ82268.1| oxygen-independent coproporphyrinogen III oxidase [Photorhabdus
           asymbiotica]
          Length = 457

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 10/245 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  + R K   + ++Q    E++   +L   R +S + +GG
Sbjct: 53  LSLYIHIPFCHKLCYFCGCNKLITRQKHKVDQYLQLLEREIRERSKLFSGRKVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   I+ ++  +  ++    + EI+IE +P  +E++        G NR+S+GVQ
Sbjct: 113 GTPTYLDKDQISKLMGVLRDHFDFLPDAEISIEIDPREIELDMIDHLHHQGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A +  AR   F   S DLIY LPKQT   +   L+R L+ 
Sbjct: 173 DFNKEVQRLVNREQDEDFIFALVARARETGFNSTSIDLIYGLPKQTSESFAFTLERVLAL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D +S++        LF    K  +  LPS    +D+  L Q+I +  G      S + 
Sbjct: 233 APDRMSIFNYA-HLPNLFAAQRKIKEHDLPSAEQKLDI--LQQTIATLTG------SGYQ 283

Query: 258 FLGAE 262
           F+G +
Sbjct: 284 FIGMD 288


>gi|209752812|gb|ACI74713.1| response regulator for gln GlnG [Escherichia coli]
          Length = 459

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDYLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|315927317|gb|EFV06661.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 252

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 122/266 (45%), Gaps = 31/266 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR------YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +  Y+H PFC  KC YC F S  +       +K  +E+ +       Q  +       I 
Sbjct: 1   MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIV------FQLKQFNIQSNQIK 54

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNR
Sbjct: 55  TLFIGGGTPSCVNAYNYEDIFKILYP--LLDKNVEISCEANPNSATLNWLKNMKNLGVNR 112

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY--ALPKQTMTQWEM 189
           IS GVQS   + L FLGR HN    I  +  A  + F  ++ DLIY   L  + M ++E+
Sbjct: 113 ISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFEL 172

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AH 246
              + +   + HLS Y LTIE  T F K           E+   +  NL +         
Sbjct: 173 LHLKQIKDLITHLSAYNLTIESNTAFAK----------KEHFKKNAPNLMKFFIKQLLEL 222

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWR 271
               YEISN S   A+   HNL YW+
Sbjct: 223 DFFQYEISNFSKTKAQICKHNLAYWQ 248


>gi|254228536|ref|ZP_04921961.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262392685|ref|YP_003284539.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp. Ex25]
 gi|151938918|gb|EDN57751.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262336279|gb|ACY50074.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp. Ex25]
          Length = 463

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  ++  + + +T SS+ EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMSLLRQEFTFSSDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKVSFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSAH----GLHAYEISNHSFLGA--ESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           ++T A     G+  + + +     A  E + + N+  Y      D +G G  A S +
Sbjct: 282 TLTGAGYQFIGMDHFALPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMI 338


>gi|291612894|ref|YP_003523051.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
 gi|291583006|gb|ADE10664.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
          Length = 467

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 3/238 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
            G  S  L +YVH PFC   C YC  N  V +     + +I+  + E+     L G  R 
Sbjct: 55  VGGISRPLSLYVHIPFCNTLCFYCACNKVVTKDFSKADQYIRYLIKEIGMQAALLGKERR 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + FGGGTP+ +    +  ++  I KN+ +  + E +IE +P  V         + G 
Sbjct: 115 VEQLHFGGGTPTFLSDDELRQVMGAIRKNFQLVEDGEYSIEIDPRKVSDATVALLGELGF 174

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEM 189
           NRIS+GVQ  + +  + + R  + +E +  I  AR N F  +S DLIY LPKQTM  ++ 
Sbjct: 175 NRISIGVQDFDPEVQKAVNRIQSEAETLQVIKAARANGFKSVSIDLIYGLPKQTMAGFKA 234

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            L + ++   D LS+Y       TLF    +  D  LP+    +D+  L  +  +  G
Sbjct: 235 TLDKVIAANPDRLSIYNYA-HMPTLFKPQRRIHDEDLPAPQTKLDILKLAVNTLTDAG 291


>gi|84386312|ref|ZP_00989340.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
 gi|84378736|gb|EAP95591.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
          Length = 463

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  VADYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVIEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I  ++  + + +  +++ EI+IE +P  +E++   
Sbjct: 104 SLLNGREVTQLHFGGGTPTFLTKTQITRLMMILREEFNFTADAEISIEVDPREIELDVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    IA +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRNEGFNRLSIGVQDFNKEVQKLVNREQDEEFIIAMVKRAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL  P E +A+ L +  +
Sbjct: 224 TQALFAETLKQVLEMKPGRLSVFNYA-HMPQLFAAQRKIKDEDLPEPKEKMAI-LQDTIE 281

Query: 241 SITSAH----GLHAYEISNHSFLGA--ESLHNLNYWRY-----GDYIGIGPGAHSRV 286
           ++T A     G+  + +       A  E + + N+  Y      D IG G  A S V
Sbjct: 282 TLTGAGYQFIGMDHFALPEDELAVAQREGILHRNFQGYTTQGEADLIGFGVSAISMV 338


>gi|325499165|gb|EGC97024.1| coproporphyrinogen III oxidase [Escherichia fergusonii ECD227]
          Length = 457

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 144/308 (46%), Gaps = 14/308 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFTRRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNTDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-----LTQSITSAHGLHAYE 252
             D LS++       T+F    K  D  LPS    +D+       LTQS     G+  + 
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIVFLTQSGYQFIGMDHFA 291

Query: 253 ISNHSFLGA--ESLHNLNYWRY---GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             +     A  E + + N+  Y   GD   +G G  +   +G        +K  + + + 
Sbjct: 292 RPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD--CYAQNQKELKQYYQQ 349

Query: 308 VRKNGHAV 315
           V + G+A+
Sbjct: 350 VDEQGNAL 357


>gi|229826223|ref|ZP_04452292.1| hypothetical protein GCWU000182_01595 [Abiotrophia defectiva ATCC
           49176]
 gi|229789093|gb|EEP25207.1| hypothetical protein GCWU000182_01595 [Abiotrophia defectiva ATCC
           49176]
          Length = 495

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 21/290 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  YK     ++Q+   E+ +   +   + ++++
Sbjct: 169 KNGYSIYIGIPFCPTTCLYCSFTSYPIGGYKKKVGEYLQALFKEIDFASTILPHKKLTTV 228

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ I  + + L+LD I     ++S  E T+EA  P S+  +  +  ++ GV R+
Sbjct: 229 YIGGGTPTSISAEELELLLDYINMKLPMASVKEFTVEAGRPDSITRDKLKVMKRLGVKRM 288

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L+F+GR H++     A  +AR      ++ DLI  LP +T+   E  L 
Sbjct: 289 SINPQTMSDKTLKFIGRMHDSESVRRAFTMAREEGMEDINMDLIVGLPGETVKDTEYTLS 348

Query: 193 RALSYAVDHLSLYQLTIEK-GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                  D L+++ L I++   L  K+++  D++ P++        LT      +G   Y
Sbjct: 349 EIKKLDPDDLTVHALAIKRAAALKLKLNELTDMI-PTDTALQQ--QLTYEFARDNGYEPY 405

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            +     + A++L N+ Y R        PG     K G + + I  EKHP
Sbjct: 406 YLYRQKNI-ADNLENVGYAR--------PG-----KEGLYNILIMEEKHP 441


>gi|332361347|gb|EGJ39151.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1056]
          Length = 198

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 107/188 (56%), Gaps = 8/188 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YVH PFC + C YCDF+      KV  +N  + S+L  +         + + +++ GGGT
Sbjct: 9   YVHIPFCTQICYYCDFS------KVFIKNQPVDSYLEHLIEEYHSYDIKKLRTLYIGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SLGVQ+ 
Sbjct: 63  PTALSARQLAFLLEKLTDKLDLSCLEELTIEANPGDLDQEKIAVLKDSPVNRVSLGVQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   ++ + +A++  +
Sbjct: 123 NDRMLKQIGRSHLEQDIYDNITNLKKVGFDNISIDLIYALPKQTMEDVKINVAKAIALDI 182

Query: 200 DHLSLYQL 207
            H+SLY L
Sbjct: 183 PHMSLYSL 190


>gi|302877517|ref|YP_003846081.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
 gi|302580306|gb|ADL54317.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
          Length = 473

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 3/229 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S  L +Y+H PFC   C YC  N  + + +     +++  + EM     L G  + +
Sbjct: 62  GGVSRPLSLYIHIPFCNTLCFYCACNKVITKDRSKSAEYVRYLIKEMGMQANLLGKGQVV 121

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             + FGGGTP+ +    I  ++  I +N+ +  + E +IE +P  V         +AG N
Sbjct: 122 EQLHFGGGTPTFLSDDEIRQVMAAIRENFKLVEDGEYSIEIDPRKVTNETIALLGEAGFN 181

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQ  ++   R + R  +  E +  I  AR N F  +S DLIY LPKQT+  +   
Sbjct: 182 RISIGVQDFDDDVQRAVNRIQSEEETLGIIAAARANGFKSVSIDLIYGLPKQTLEGFGRT 241

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           L R ++   D LS+Y       TLF    +  +  LPS  + +D+  +T
Sbjct: 242 LDRIIAANPDRLSIYNYA-HMPTLFKPQRRIHEEDLPSPQMKLDILGMT 289


>gi|290513116|ref|ZP_06552479.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
 gi|289774498|gb|EFD82503.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
          Length = 457

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+     L   R +  + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPLFASRQVKQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDHLRTEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  + +     +H AR I F   + DLIY LPKQT   +   LQ+    
Sbjct: 173 DFNKEVQRLVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQTPESFAFTLQKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       TLF    K  D  LPS    +++   T    +A G
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAEQKLEILQETIGSLTAAG 281


>gi|242129430|gb|ACS83765.1| coproporphyrinogen III oxidase [Nonomuraea sp. WU8817]
          Length = 414

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 45/388 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHV--------------RRYKVGQENFIQSFLTEMQWMRQLT 66
           +YV+ PFC  KC +CD+ + V              RRY       I++    +  +    
Sbjct: 23  IYVNVPFCNSKCHFCDWVTEVPLADLRLTPDSSPRRRYVAALVKQIETHAPTLGGL---- 78

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G R    +++GGGT S++  + I  +   +A  + +   VE TIE +P S++    + +R
Sbjct: 79  GYRP-EVMYWGGGTASILTIEEIEAVAGALAARFDLGGLVEATIEGSPESMDPGKLKLFR 137

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G NRIS+GVQ+ ++  LR +GR H+A +A  A+ +A +  F  ++ DLI   P Q   
Sbjct: 138 AIGFNRISIGVQAFDDARLRRIGRVHSAEQAERAVRMAADAGFDNINIDLIVGFPGQGAD 197

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +    +Q A++  V+H S+Y      GT+  +    G   +  E   +  Y+  + + + 
Sbjct: 198 EVSRTIQHAVTLPVNHFSVYPYRPTGGTVMRRQVGRGMGRIDVEE-QLRSYDHARDLLAR 256

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV--------KVGSHRVAISI 297
           HG   Y  +       ES   + Y    D+IG G GA+S +        + G HR + + 
Sbjct: 257 HGFEEYATAYFGAPRCES-DEVYYKLTMDWIGFGSGANSLIGTRFLLNDRGGLHRFSTAP 315

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
                          H        S+      FL   L   +G+  + +++  GR+L   
Sbjct: 316 ---------------HRFDSDTPASAPHLTRHFLAQALTTVDGMDARTFQLRTGRSLRAA 360

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTM 385
           CE    R+   +  +  RL    RG+ +
Sbjct: 361 CEEPAVRRMLEQINRRGRLIVDSRGIRL 388


>gi|325108592|ref|YP_004269660.1| coproporphyrinogen III oxidase anaerobic [Planctomyces brasiliensis
           DSM 5305]
 gi|324968860|gb|ADY59638.1| coproporphyrinogen III oxidase, anaerobic [Planctomyces
           brasiliensis DSM 5305]
          Length = 440

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 125/230 (54%), Gaps = 5/230 (2%)

Query: 3   YLSAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+SA  + +  +   S  LG+Y H PFC K+C +C F  ++++     + ++Q+   E+Q
Sbjct: 33  YVSAAHDVLHREPDRSIPLGIYTHIPFCRKRCKFCYFKVYIQQNAKTIQRYVQAVDDELQ 92

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
            + +L     R I   +FGGGTPS +  + +  + D ++++ +  +  E+T E  P ++ 
Sbjct: 93  RVSKLPAIRDRRIEYAYFGGGTPSYLSSKQLLQLRDRLSQSVSWETAQEVTFECEPGTLN 152

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R+ G+ R+SLGV+S  ++ L+  GR H + E   A    +++ FP+++ DLI 
Sbjct: 153 QEKVKTLREIGITRVSLGVESFNDEILKENGRAHLSPEVEKAYGWIQDVGFPQVNIDLIA 212

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            +  +T   W   + +A+ +A D+++LYQ+ +   T+  +  K+ +   P
Sbjct: 213 GMIGETDDNWHRNIDKAIEFAPDNITLYQMELPFNTIISQEMKEKNAGAP 262


>gi|295095021|emb|CBK84111.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 457

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAPLFKGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N++ + + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMALLRGNFSFNDDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  + +   A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEAFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAYTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I S
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETIAS 276


>gi|157147353|ref|YP_001454672.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157084558|gb|ABV14236.1| hypothetical protein CKO_03145 [Citrobacter koseri ATCC BAA-895]
          Length = 457

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 4/240 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A+++ +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     L
Sbjct: 40  AFQHAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIIHRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R +S + +GGGTP+ +    I+ ++  +  N+  + +VEI+IE +P  +E++     
Sbjct: 100 FAGRRVSQLHWGGGTPTYLNKAQISRLMTLLRGNFHFNDDVEISIEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   R + R  +     + ++ AR I F   + DLIY LPKQT 
Sbjct: 160 RAQGFNRLSMGVQDFNKDVQRLVNREQDEEFIFSLLNHAREIGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R    + D LS++       TLF    K  +  LPS    +D+  L ++I+S
Sbjct: 220 ESFAFTLRRVAELSPDRLSVFNYA-HLPTLFAAQRKIKEADLPSAQQKLDI--LQETISS 276


>gi|251771082|gb|EES51666.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum ferrodiazotrophum]
          Length = 417

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 167/377 (44%), Gaps = 13/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           GVYV  PFC  +C YC     V    V +  ++ +   E Q +  L    S  S++ GGG
Sbjct: 32  GVYVQVPFCPDRCDYCAVPVSVSTAMVSR--YLAALALEAQKVAGLLADTSPVSLYIGGG 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           +P  +  + +  +L  +A  +      E+T+E+ P  ++V   +  R+    R+SLG++ 
Sbjct: 90  SPLSLPREALLRLLKILAPFFPKGEVPEVTVESRPEDLDVETLEILRRIPGIRLSLGIEG 149

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM--ELQRALSY 197
              + L  LGR     E +A +   R   P  +  + + + ++T ++  +    +  LS 
Sbjct: 150 GSREELDRLGRRSAYLEPLALLRRLRREIPEAAISMDFIVGEETGSEDRLLATARELLSE 209

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +DHLS+Y L +E  T+       G      E  A   +       SA G + YE+SN S
Sbjct: 210 GLDHLSVYPLVVESRTVLALRKSQGQTSESLEEEAAARWVEICRALSAQGWNRYEVSNFS 269

Query: 258 FLGAESL--HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
               ES+  HN + W+ GDY+GIG GAH R          S+ +    +++M+     + 
Sbjct: 270 R-DPESVCRHNRHVWQGGDYLGIGAGAHQRRGRKRRENVRSVSE----YVRMIEGGLDSY 324

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE--RVQF 373
              E LS      E+L   LRL EGIS    +   G +          R   ++  R   
Sbjct: 325 GLTESLSENAYDIEYLYGNLRLSEGISAGWLKEKVGDDSYEFLHSEFVRMDVLDQNRTNS 384

Query: 374 SRLRCTQRGMTMLDSVI 390
            RL    RG ++LDS++
Sbjct: 385 QRLVLNDRGFSLLDSLV 401


>gi|237727975|ref|ZP_04558456.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter sp.
           30_2]
 gi|226910232|gb|EEH96150.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter sp.
           30_2]
          Length = 459

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKVVTRQQHKADQYLDVLEQEIIHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMSLLRGNFNFNDDAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D LS++       TLF    K  D  LPS    +D+  L ++I+S
Sbjct: 235 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDI--LQETISS 278


>gi|332288573|ref|YP_004419425.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
 gi|330431469|gb|AEC16528.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
          Length = 455

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 3/232 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH PFC K C +C  N  + R++   + ++     E++    L   R+++ I 
Sbjct: 48  TRPLSLYVHIPFCHKLCYFCACNKVITRHQHKADIYLDYLEKEIRTRSALFSKRTVTQIH 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +  +    ++  +  ++T+S N EI+IE +P  +E++     RK G NRIS+
Sbjct: 108 WGGGTPTYLTEEQSDRLMSMLRSHFTISENAEISIEMDPREIELSMLDHLRKIGFNRISM 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++  + + R  +       +H AR + F   + DLIY LP QT+  +   LQ+ 
Sbjct: 168 GVQDFNKEVQKAINREQDEQFIFDLMHHARELGFQSTNLDLIYGLPLQTLDSFMFTLQKV 227

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSA 245
           L    D LS++       T F    K    +LPS    +  L N  + +TS+
Sbjct: 228 LELNPDRLSIFNYA-HLPTRFAGQRKIKQEMLPSPETKLSILQNTIEFLTSS 278


>gi|328471663|gb|EGF42540.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus 10329]
          Length = 463

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  +++ + + +T S + EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|225376528|ref|ZP_03753749.1| hypothetical protein ROSEINA2194_02170 [Roseburia inulinivorans DSM
           16841]
 gi|225211627|gb|EEG93981.1| hypothetical protein ROSEINA2194_02170 [Roseburia inulinivorans DSM
           16841]
          Length = 489

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 139/263 (52%), Gaps = 12/263 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ +  ++   ++++ +   E+ ++    G + ++SI+
Sbjct: 163 NGYSLYIGIPFCPTTCLYCSFTSYPLVSWRQKVDSYLDALEKELDYVAVKFGKKHLNSIY 222

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +  +K  + RIS
Sbjct: 223 IGGGTPTTLEPYQLDRLIRKIRCSFDLSHCLEFTVEAGRPDSITREKLETLKKWDITRIS 282

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L+ +GR H  ++ + +  LAR + F  ++ DLI  LP++++      L++
Sbjct: 283 INPQTMKDETLKIIGRRHTVAQTVESFQLARELGFDDINMDLIMGLPEESLEDVRDTLEQ 342

Query: 194 ALSYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +   D+L+++ L +++     +F + +KD  +V  +E++     NLT       GL  
Sbjct: 343 VKALKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTTEHM-----NLTAEYAKEMGLEP 397

Query: 251 YEISNHSFLGAESLHNLNYWRYG 273
           Y +     +   +L N+ Y   G
Sbjct: 398 YYLYRQKSMAG-NLENVGYASPG 419


>gi|170683331|ref|YP_001746196.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170521049|gb|ACB19227.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           SMS-3-5]
          Length = 457

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R    NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEDFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|218701434|ref|YP_002409063.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|300937091|ref|ZP_07151953.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 21-1]
 gi|218371420|emb|CAR19253.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli IAI39]
 gi|300457823|gb|EFK21316.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 21-1]
          Length = 457

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRKVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R    NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEDFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|28896889|ref|NP_796494.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365925|ref|ZP_05778419.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260877787|ref|ZP_05890142.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260895563|ref|ZP_05904059.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|260902588|ref|ZP_05910983.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|28805097|dbj|BAC58378.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308088486|gb|EFO38181.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308089769|gb|EFO39464.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308109706|gb|EFO47246.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308113448|gb|EFO50988.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 463

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDLLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  +++ + + +T S + EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|219870722|ref|YP_002475097.1| coproporphyrinogen III oxidase [Haemophilus parasuis SH0165]
 gi|219690926|gb|ACL32149.1| coproporphyrinogen III oxidase [Haemophilus parasuis SH0165]
          Length = 455

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 104/191 (54%), Gaps = 1/191 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH PFC K C +C  N  + R++   + ++     E+++   L   R+++ I 
Sbjct: 48  NKPLSLYVHIPFCHKLCYFCACNKIITRHQHKVDIYLDYLEKEIKYRADLFKDRTVTQIH 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ ++      ++  + K++ VS N EI+IE +P  +E+   +  R+ G NRIS+
Sbjct: 108 WGGGTPTYLDEDQSLRLMAMLRKHFNVSDNAEISIEMDPREIELEMLEHLREIGFNRISM 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q   ++  + + R  +     A +  AR + F   + DLIY LPKQT+  +   L+R 
Sbjct: 168 GIQDFNKEVQKLVNREQDEEFIFALMKRARELGFTSTNIDLIYGLPKQTVESFMFTLERV 227

Query: 195 LSYAVDHLSLY 205
           +    D +S++
Sbjct: 228 IQLNPDRMSVF 238


>gi|242129439|gb|ACS83774.1| coproporphyrinogen III oxidase [Nonomuraea sp. WU8817]
          Length = 416

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 185/398 (46%), Gaps = 38/398 (9%)

Query: 10  NMTGQGSN-SLGVYVHWPFCVKKCPYCDF-----NSHVRRYKVGQE--NFIQSFLTEMQW 61
           ++  +G++  L +YV+ PFC  KC +CD+      S +R         +++ +  T+++ 
Sbjct: 19  SLPARGTDRPLLLYVNIPFCNSKCHFCDWVVDVPVSDLRLAPAAPRRVDYLAALCTQIRT 78

Query: 62  ---MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                +  G R    +++GGGT +++    I  +   +A  + +++  E TIE +P SV+
Sbjct: 79  HAPALRAAGYRG-EVMYWGGGTATVLTAAEIEQVHACLAAEFDLTALAEATIEGSPESVD 137

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R  G +R+SLGVQS +E  LR +GR H+A +A+ ++  A    F  ++ DLI 
Sbjct: 138 PAKLRLLRDLGFDRVSLGVQSFDETRLRRIGRAHSAGQAVRSVEDAHAAGFDNINIDLIV 197

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P Q++ + E  ++RAL   V+H S+Y     +GT+  +  +     +  E+  +  Y 
Sbjct: 198 GFPDQSLAEVEQTVRRALDLPVNHFSVYSYRATEGTVMRRQIERSGTAIELEH-QLQSYR 256

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYG-DYIGIGPGAHSRVKV-----GS 290
           L   + +A G   Y +   S+ GA   L +  Y+R   D+IG G GA+S +       G 
Sbjct: 257 LAGEMLAAAGHPEYAV---SYFGAPRCLADEAYYRLSMDWIGFGTGANSLINQRYLLNGR 313

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            R+     +  E  + +        V            ++L   L   EGI    ++   
Sbjct: 314 GRMRDFTSRPGEFEVDLPAGVPSLTV------------QWLPRALGTAEGIDAATFQRRT 361

Query: 351 GRNLDIECERNLQRQGFIERV-QFSRLRCTQRGMTMLD 387
           G +L   CE   +   F+ RV +F RL   + G+ + D
Sbjct: 362 GTSLRAACEEP-ELNAFLTRVNEFGRLVVDRDGIRLAD 398


>gi|81243107|gb|ABB63817.1| O2-independent coproporphyrinogen III oxidase [Shigella dysenteriae
           Sd197]
          Length = 459

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 115 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I     + DLIY LPKQT   +   L+R    
Sbjct: 175 DFNKEVQRLVNREQDEEFIFALLNHAREIGLTSTNIDLIYGLPKQTPESFAFTLKRVAEL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 235 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 283


>gi|171920823|ref|ZP_02932000.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185179039|ref|ZP_02964784.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024215|ref|ZP_02996922.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518658|ref|ZP_03004097.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524458|ref|ZP_03004467.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867661|ref|ZP_03079663.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273706|ref|ZP_03206241.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209554476|ref|YP_002284674.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225551322|ref|ZP_03772268.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903591|gb|EDT49880.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209022|gb|EDU06065.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018869|gb|EDU56909.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188997743|gb|EDU66840.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195659658|gb|EDX53038.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660718|gb|EDX53973.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249734|gb|EDY74515.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209541977|gb|ACI60206.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225379137|gb|EEH01502.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
          Length = 354

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 27/334 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             N+  +Y+H PFC   C Y DF   ++   V  ++  + FL ++Q   +    +   +I
Sbjct: 4   SQNTKHLYIHIPFCNHICTYSDFKRILKT--VQSKDIFKDFLKDVQMRIKNFKTKQFETI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGG P+ +    +  +L  I     VS+N E TIE NP  +       ++K  +NRIS
Sbjct: 62  YLGGGVPNCLSNCELKQLLQTIFP--YVSNNCEYTIECNPELINQTQINLFKKYKINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           L  QSL    L+ +   H   +   AI L  +N    +S D +Y L   T+   +     
Sbjct: 120 LNAQSLNNNILKKMNYIHTNQDIKNAIDLFYKNKIFNISCDFLYCLTMLTLKDLDDIFDF 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +   ++H+S Y L I+  ++  K+    ++ +  +  A  +  +     S +  H YE+
Sbjct: 180 IVQNKINHVSFYGLEIKDESILKKL----NISINEDQDAEQMSYVNNKFASLNFKH-YEV 234

Query: 254 SN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM-VRKN 311
           SN  S L   + HNL YW+  D+  IG GAH              E + E +    V+K 
Sbjct: 235 SNWVSDLKYVAKHNLAYWQTKDWAAIGWGAH------------GFENNIEYFFDAPVQK- 281

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              V+ K+ L+      + LMMGLRL+EG+++ +
Sbjct: 282 --PVLIKKMLTKYDIYQQILMMGLRLKEGLNLNE 313


>gi|312837890|gb|ADR01089.1| NocN [Nocardia sp. ATCC 202099]
          Length = 420

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 171/395 (43%), Gaps = 44/395 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWM-RQLTGPRS 70
           L +YVH PFC  KC +CD+   +       +     ++N+I++ +TE++    QL     
Sbjct: 31  LMLYVHVPFCHSKCTFCDWVQAIPTKDLLRKPEDSVRKNYIRALVTEIETRGAQLRAAGQ 90

Query: 71  IS-SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +   +++GGGT S ++      I   +   + +S+  E TIE +P +V+    + +R  G
Sbjct: 91  VPYVVYWGGGTASSLDNAEAEAIWGALDSAFDLSTVAEATIECSPDTVDKAKLEFFRGLG 150

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQS ++  LR LGR H A EA   +H AR   F  +S D++   P Q + +  
Sbjct: 151 FNRVSSGVQSFDDARLRRLGRRHTAGEADRIVHHAREAGFDEVSIDIMSGFPDQELDELR 210

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++A+S  + HLSLY      GT F +    G            L+   + +    GL
Sbjct: 211 ATVEKAVSLPLTHLSLYSFRPTPGT-FMRRKLAGTEKRAYLRKQQALFTEARRMIIDAGL 269

Query: 249 HAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             Y      + G  S     Y++   D  G G GA S V                 +L  
Sbjct: 270 PEY---ASGYFGRVSPFAAMYFQLRADTAGFGSGAISLVD--------------RQFLSH 312

Query: 308 VRKNGHAVVEKEF-------LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            +   HA ++             ++    FL  GL + +G+  ++W +  G +LD    R
Sbjct: 313 AKGKLHAYIQDPLAYDIDVPAGQDRVLVSFLQAGLAMFDGVLREEWRVSTGTDLDEVLTR 372

Query: 361 N--------LQRQGFIERVQFSRLRCTQRGMTMLD 387
                    L+ +G IE  +  RL     G+T+++
Sbjct: 373 PSIAPLADFLRGRGLIEDERGIRLDPRLAGLTLIE 407


>gi|161950011|ref|YP_405308.2| coproporphyrinogen III oxidase [Shigella dysenteriae Sd197]
 gi|309783775|ref|ZP_07678421.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1617]
 gi|308928358|gb|EFP73819.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1617]
          Length = 457

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I     + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGLTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|300714617|ref|YP_003739420.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
           Eb661]
 gi|299060453|emb|CAX57560.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
           Eb661]
          Length = 455

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 126/259 (48%), Gaps = 10/259 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC + C +C  N  V R +   + ++ +  +E+Q   +
Sbjct: 38  AAFQQAAQRYPDRPLSLYVHIPFCHRLCYFCGCNKLVTRQQHKADAYLDALASEIQSRAK 97

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +  Q I  ++  + + +T S + E++IE +P  +E++    
Sbjct: 98  LFRGRTVSQMHWGGGTPTYLNKQQITRLITLLRQAFTFSEDAELSIEVDPREIELDVLDH 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
              AG NR+S+GVQ   +     + R  +    +  I  AR + F  +S DLIY LP QT
Sbjct: 158 LHAAGFNRLSMGVQDFNKTVQEKVNRVQDEQVIVDLIARARQVGFASVSLDLIYGLPAQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ ++   D LS++        LF    K  +  LP+    +D+  L QSI 
Sbjct: 218 PESFAFTLQKVIALNPDRLSVFNYA-HMPALFAAQRKIKEADLPNAQQKMDI--LQQSIA 274

Query: 244 SAHGLHAYEISNHSFLGAE 262
              G      + + F+G +
Sbjct: 275 MLTG------AGYQFIGMD 287


>gi|296933177|gb|ADH93700.1| NocB [Amycolatopsis fastidiosa]
          Length = 391

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 171/395 (43%), Gaps = 44/395 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWM-RQLTGPRS 70
           L +YVH PFC  KC +CD+   +       +     ++N++++ +TE++    QL     
Sbjct: 2   LMLYVHVPFCHSKCTFCDWVQAIPTKDLLRKPEDSVRKNYVRALVTEIETRGAQLRAAGQ 61

Query: 71  IS-SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +   +++GGGT S ++      I   +   + +S+  E TIE +P +V+    + +R  G
Sbjct: 62  VPYVVYWGGGTASSLDNAEAEAIWGALDSAFDLSTVAEATIECSPDTVDKAKLEFFRGLG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQS ++  LR LGR H A EA   +H AR   F  +S D++   P Q + +  
Sbjct: 122 FNRVSSGVQSFDDARLRRLGRRHTAGEADRIVHHAREAGFDEVSIDIMSGFPDQELDELR 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++A+S  + HLSLY      GT F +    G            L+   + +    GL
Sbjct: 182 ATVEKAVSLPLTHLSLYSFRPTPGT-FMRRKLAGTEKRAYLRKQQALFTEARRMIIDAGL 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             Y      + G  S     Y++   D  G G GA S V                 +L  
Sbjct: 241 PEY---ASGYFGRVSPFAAMYFQLRADTAGFGSGAISLVD--------------RQFLSH 283

Query: 308 VRKNGHAVVEKEF-------LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            +   HA ++             ++    FL  GL + +G+  ++W +  G +LD    R
Sbjct: 284 AKGKLHAYIQDPLAYDIDVPAGQDRVLVSFLQAGLAMFDGVLREEWRVSTGTDLDEVLTR 343

Query: 361 N--------LQRQGFIERVQFSRLRCTQRGMTMLD 387
                    L+ +G IE  +  RL     G+T+++
Sbjct: 344 PSIAPLADFLRGRGLIEDERGIRLDPRLAGLTLIE 378


>gi|225550492|ref|ZP_03771441.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225379646|gb|EEH02008.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 354

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 27/334 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             N+  +Y+H PFC   C Y DF   ++   V  ++  + FL ++Q   +    +   +I
Sbjct: 4   SQNTKHLYIHIPFCNHICTYSDFKRILKT--VQSKDIFKDFLKDVQMRIKNFKTKQFETI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGG P+ +    +  +L  I     VS+N E TIE NP  +       ++K  +NRIS
Sbjct: 62  YLGGGVPNCLSNCELKQLLQTIFP--YVSNNCEYTIECNPELINQTQINLFKKYKINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           L  QSL    L+ +   H   +   AI L  +N    +S D +Y L   T+   +     
Sbjct: 120 LNAQSLNNNILKKMNYIHTNQDIKNAIDLFYKNKIFNISCDFLYCLTILTLKDLDDIFDF 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +   ++H+S Y L I+  ++  K+    ++ +  +  A  +  +     S +  H YE+
Sbjct: 180 IVQNKINHVSFYGLEIKDESILKKL----NISINEDQDAEQMSYVNNKFASLNFKH-YEV 234

Query: 254 SN-HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM-VRKN 311
           SN  S L   + HNL YW+  D+  IG GAH              E + E +    V+K 
Sbjct: 235 SNWVSDLKYVAKHNLAYWQTKDWAAIGWGAH------------GFENNIEYFFDAPVQK- 281

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              V+ K+ L+      + LMMGLRL+EG+++ +
Sbjct: 282 --PVLIKKMLTKYDIYQQILMMGLRLKEGLNLNE 313


>gi|331001000|ref|ZP_08324636.1| coproporphyrinogen dehydrogenase [Parasutterella excrementihominis
           YIT 11859]
 gi|329569775|gb|EGG51539.1| coproporphyrinogen dehydrogenase [Parasutterella excrementihominis
           YIT 11859]
          Length = 466

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 2/199 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           TG  +  L +YVH PFC   C +C  N  V +     + +++    E + +  Q+ G + 
Sbjct: 54  TGDNTADLSLYVHIPFCANVCFFCGCNKEVTKDHCRSKEYLEVLSKECELVSAQIGGNKE 113

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + FGGG+P+ +  + I  ++D I  ++T++ + EI+IE +P S  V+  +   KAG 
Sbjct: 114 VVQLHFGGGSPTFLNNEEIFQVMDIIRSHFTLAPDAEISIEVDPRSTPVDKVEVLAKAGF 173

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ  + +    + R        A +  AR N F  ++ DLIY LP Q+   +EM
Sbjct: 174 NRMSIGVQDFDNRVQIAVNRVQPFEMTKAVLDAARANGFKSINMDLIYGLPFQSRKTFEM 233

Query: 190 ELQRALSYAVDHLSLYQLT 208
            L + +  + D ++LY   
Sbjct: 234 TLDKVIELSPDRIALYHFA 252


>gi|303257716|ref|ZP_07343728.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderiales
           bacterium 1_1_47]
 gi|302859686|gb|EFL82765.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderiales
           bacterium 1_1_47]
          Length = 467

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 2/199 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           TG  +  L +YVH PFC   C +C  N  V +     + +++    E + +  Q+ G + 
Sbjct: 55  TGDNTADLSLYVHIPFCANVCFFCGCNKEVTKDHCRSKEYLEVLSKECELVSAQIGGNKE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + FGGG+P+ +  + I  ++D I  ++T++ + EI+IE +P S  V+  +   KAG 
Sbjct: 115 VVQLHFGGGSPTFLNNEEIFQVMDIIRSHFTLAPDAEISIEVDPRSTPVDKVEVLAKAGF 174

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ  + +    + R        A +  AR N F  ++ DLIY LP Q+   +EM
Sbjct: 175 NRMSIGVQDFDNRVQIAVNRVQPFEMTKAVLDAARANGFKSINMDLIYGLPFQSRKTFEM 234

Query: 190 ELQRALSYAVDHLSLYQLT 208
            L + +  + D ++LY   
Sbjct: 235 TLDKVIELSPDRIALYHFA 253


>gi|257126657|ref|YP_003164771.1| coproporphyrinogen III oxidase [Leptotrichia buccalis C-1013-b]
 gi|257050596|gb|ACV39780.1| Coproporphyrinogen dehydrogenase [Leptotrichia buccalis C-1013-b]
          Length = 507

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 143/287 (49%), Gaps = 22/287 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRS--ISS 73
           ++G+Y+   FC  KC YC F +++ R K  +  + +I+S   E++ + QLT      I++
Sbjct: 180 TIGIYIGIAFCPTKCSYCSFPAYLLRGKYAEQYDEYIESIYHEIREIGQLTQELDLKINT 239

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++  + I  +L+ + +N+ +    E T EA    ++        +  G+N+
Sbjct: 240 IYIGGGTPSILTAEEIDELLETVKENYNLDYLKEFTFEAGRIDTLNEEKLTIIKSYGINK 299

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+  QS  E++L+ + R HN  +      LA+N+   ++ DLI  LP++T       + 
Sbjct: 300 ISINPQSFNEKTLKLVNRYHNREQFDNVYKLAKNLGLEINMDLILGLPRETTEDILYTMD 359

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
               Y +++L+++ L I+  +   K +   + VL  E +    Y   Q++T   GL  Y 
Sbjct: 360 EISKYNMENLTIHNLAIKNASRLNKENYVHEDVLDYEKI----YEKIQNVTENKGLFPYY 415

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV 286
                      E   +S  G+ES++N+         IGIG GA +++
Sbjct: 416 MYRQKNSFQWGENLGYSLNGSESIYNIEMIEENKTIIGIGAGAITKL 462


>gi|153838826|ref|ZP_01991493.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ3810]
 gi|149747756|gb|EDM58652.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ3810]
          Length = 463

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYLHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  +++ + + +T S + EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|225620187|ref|YP_002721444.1| putative coproporphyrinogen III oxidase [Brachyspira hyodysenteriae
           WA1]
 gi|225215006|gb|ACN83740.1| putative coproporphyrinogen III oxidase [Brachyspira hyodysenteriae
           WA1]
          Length = 351

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 20/305 (6%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGI---AKNWTVSSNV- 106
           +I++ + E++ +R       I +I+ GGGTPS++    +  +LD I     N  +++N  
Sbjct: 10  YIEALILELK-LRISDYKSEIETIYLGGGTPSVLGADLLKYLLDNILNIVHNKDLNTNFI 68

Query: 107 -EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA- 164
            EITIE+N + +     +        R+SLG+Q+  E+SL  + R+ +  + I A+ L  
Sbjct: 69  KEITIESNINDINNEYIKFLENIPNIRLSLGIQTFNEKSLAIINRHTDKKDIIKALKLIN 128

Query: 165 RNIFPRMSFDLIYALPKQTMTQW--EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           ++    +S D I  LP  +  Q   ++     L   + H SLY L + +      +HK  
Sbjct: 129 KSSLKNISLDFICGLPLNSENQIVDDILFSYDLLPKLKHFSLYYLELTES-----LHKKW 183

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
             +LPSE  +   Y          G   YE+SN+S     S+HN NYW   DYIGIG  A
Sbjct: 184 KEILPSEEESTIYYKKASDTLEGLGFKRYEVSNYSLPNYNSIHNSNYWLLKDYIGIGVSA 243

Query: 283 HSRVKVGSHRVA-ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                +G +     S  K    +   + KN   + E E+L  + +  EF+ + LR  +GI
Sbjct: 244 -----LGCYNDNRYSNVKMIRDYFDFIDKNKLPIYENEYLDIDIRKKEFIFLSLRTVKGI 298

Query: 342 SVKDW 346
           ++  +
Sbjct: 299 NIDKY 303


>gi|90414667|ref|ZP_01222638.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
 gi|90324209|gb|EAS40784.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
          Length = 457

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 2/231 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFC K C YC  N  + R++   + ++ +   E++    L G R +S + +G
Sbjct: 52  KLSLYIHIPFCHKLCYYCGCNKIITRHQHKADQYLDALEQEIRQRASLLGDRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  +  + ++  +   ++  ++ EI+IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLTKKQASRLMALLRDQFSFDADAEISIEVDPREIELDILDHLRGEGFNRLSIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R  +    +A +  A+++ F   + DLIY LPKQ    +   LQ+ L 
Sbjct: 172 QDFNKEVQKLVNREQDEEFIVAMVQRAKDLGFRSTNLDLIYGLPKQNRELFAETLQQVLK 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                LS++       +LF    K  D  LPS N  + +   T +  +  G
Sbjct: 232 MKPGRLSVFNYA-HMPSLFAAQRKIKDDQLPSANEKLGILQDTIATLTGAG 281


>gi|300725173|ref|YP_003714501.1| coproporphyrinogen III oxidase [Xenorhabdus nematophila ATCC 19061]
 gi|297631718|emb|CBJ92437.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Xenorhabdus nematophila ATCC 19061]
          Length = 457

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  V R K   + ++     E+    +L   R +S + +GG
Sbjct: 53  LSLYIHIPFCHKLCYFCGCNKLVTRQKHKADEYLNVLEKEIITRAKLFSQRKVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   I+ ++  +  ++    + E+++E +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLDKAQISRLMSMLRSHFHFLPDAELSLEIDPREIELDVIDHLRHEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR   F   S DLIY LPKQT   +   LQR L+ 
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALVNRARETGFTSTSIDLIYGLPKQTPESFAFTLQRVLAL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + D LS++        +F    K  +  LP+    +D+   T S  + +G
Sbjct: 233 SPDRLSVFNYA-HLPDVFAAQRKIKEQDLPNATQKLDILQATISTLTGNG 281


>gi|284009198|emb|CBA76266.1| oxygen-independent coproporphyrinogen III oxidase [Arsenophonus
           nasoniae]
          Length = 462

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R+K   +N++     E+    QL   R++  + +GG
Sbjct: 58  LSLYVHIPFCHKLCYFCGCNKLVTRHKHKVDNYLLVLEKEIIKQAQLFTNRTVIQMHWGG 117

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   ++ ++  +  ++  + + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 118 GTPTYLDKSQLSQLMAMLKSHFNFAVDAEISIEIDPREIELHIIDHLRCEGFNRLSMGVQ 177

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +Q    + R  + +   A +  AR + F   S DLIY LPKQT   +   L+R L+ 
Sbjct: 178 DFNKQVQHLVNRQQDEAFIFALVQRAREVGFNSTSIDLIYGLPKQTAETFAFTLERVLAL 237

Query: 198 AVDHLSLY 205
           + D LS++
Sbjct: 238 SPDRLSVF 245


>gi|209921341|ref|YP_002295425.1| coproporphyrinogen III oxidase [Escherichia coli SE11]
 gi|209914600|dbj|BAG79674.1| coproporphyrinogen III oxidase [Escherichia coli SE11]
 gi|324019791|gb|EGB89010.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 117-3]
          Length = 457

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++        G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLCAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A ++ AR I F   + DLIY LPKQT   +   L+R    
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       T+F    K  D  LPS    +D+   T +  +  G
Sbjct: 233 NPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG 281


>gi|54310550|ref|YP_131570.1| coproporphyrinogen III oxidase [Photobacterium profundum SS9]
 gi|46914993|emb|CAG21768.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Photobacterium profundum SS9]
          Length = 457

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 2/231 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFC K C YC  N  + R++   + ++ +   E++    L G R +S + +G
Sbjct: 52  KLSLYIHIPFCHKLCYYCGCNKIITRHQHKADQYLDALEQEIRQRASLLGDRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  +  + ++  +   ++  ++ EI+IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLTKKQASRLMALLRDQFSFDTDAEISIEVDPREIELDMLDHLRGEGFNRLSIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R  +    +A +  A+ + F   + DLIY LPKQ    +   LQ+ L 
Sbjct: 172 QDFNKEVQKLVNREQDEDFIVAMVQRAKELGFRSTNLDLIYGLPKQNRELFAETLQQVLK 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                LS++       +LF    K  D  LPS N  + +   T +  +  G
Sbjct: 232 MKPGRLSVFNYA-HMPSLFAAQRKIKDDQLPSANEKLGILQDTIATLTGAG 281


>gi|260589628|ref|ZP_05855541.1| oxygen-independent coproporphyrinogen III oxidase 2 [Blautia
           hansenii DSM 20583]
 gi|331083060|ref|ZP_08332177.1| hypothetical protein HMPREF0992_01101 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260539868|gb|EEX20437.1| oxygen-independent coproporphyrinogen III oxidase 2 [Blautia
           hansenii DSM 20583]
 gi|330405062|gb|EGG84599.1| hypothetical protein HMPREF0992_01101 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 483

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 4/208 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +YV  PFC   C YC F+S  + R++   ++++ + L E+ ++ +    +++ +I+
Sbjct: 163 NGYSLYVGIPFCPSICLYCSFSSSPLERWRDKVDSYLDALLKELDFIAETMKDKTLDTIY 222

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +EPQ +  +L  I K + +    E TIEA  P S+     Q  R+  V RIS
Sbjct: 223 IGGGTPTTLEPQQLHRLLGHIQKRFPMEQVKEYTIEAGRPDSITKEKLQAIREYPVTRIS 282

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++  ++L+ +GRNH   +   A  LAR   F  ++ DLI  LP +     E  L+ 
Sbjct: 283 VNPQTMNAETLKIIGRNHTVEDTRHAFALARECGFDNINMDLIVGLPGEHKDDVEHTLKE 342

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             +   D L+++ L +++     +M KD
Sbjct: 343 IQALDPDSLTIHSLAVKRAARL-RMFKD 369


>gi|119433794|gb|ABL74954.1| Tlm Orf11 [Streptoalloteichus hindustanus]
          Length = 424

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 163/370 (44%), Gaps = 39/370 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQE---NFIQSFLTE 58
           L+A    +    +  L VYVH PFC  KC +CD+ +   VRR + G E   +++ +   +
Sbjct: 11  LTAISEVVRNHPNKKLAVYVHIPFCSSKCHFCDWVTDIPVRRLRSGPEGRASYVDALCDQ 70

Query: 59  MQWM-RQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           +++   QLT  G R    +++GGGTP+ + P+ +  I   +  ++  S  V+ T+E  P+
Sbjct: 71  IRFYGPQLTRFGYRP-KVMYWGGGTPTRLAPEEMRAIRAALDDSFDFSDLVQWTVETTPN 129

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
            ++       R+ GV+R+S+GVQSL    LR  GR H+  +A+AA  L R       + D
Sbjct: 130 DLDAEKLAAMREIGVDRVSVGVQSLNPYQLRKAGRAHSREQALAAFPLLRQAGITNFNVD 189

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL--------FYKMHKDGDLVL 226
           LI + P +    +   ++  L+    H+S+Y       T+        F + H+  D+V 
Sbjct: 190 LISSFPGEDQESFRRTVEDILALDPPHVSVYPYRATPKTVMAMQLDREFLEAHQQHDMVA 249

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-----NLNYWRYGDYIGIGPG 281
                    Y +   +    G H Y    H +   ++ H     N  Y   GD IG G G
Sbjct: 250 --------TYEMAMEMLGQAGYHEY---CHGYWVRDAAHEDHDGNFKYDLEGDKIGFGSG 298

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           A S +    H +  S     E +L   R    ++  +  L   ++    +   L  REG+
Sbjct: 299 AESII---GHHLLWSENTKYEEYLDDPRT--FSMAHRFTLDDPERLTAPVGGALMTREGV 353

Query: 342 SVKDWEMLAG 351
               +  L G
Sbjct: 354 DFARFHRLTG 363


>gi|134300714|ref|YP_001114210.1| coproporphyrinogen III oxidase [Desulfotomaculum reducens MI-1]
 gi|134053414|gb|ABO51385.1| coproporphyrinogen III oxidase, anaerobic [Desulfotomaculum
           reducens MI-1]
          Length = 494

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 146/290 (50%), Gaps = 20/290 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           Q    +GVY+  PFC  +C YC F S+ ++R++   + F+++ L E+Q + +    +   
Sbjct: 164 QAKKLVGVYIGIPFCPSRCLYCSFPSYSIKRHRDMVDPFLKALLQEIQVIGETLRSQGLL 223

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
           + SI+ GGGTP+ +  + +  +L+ I  +    S +E+T+E   P ++  + F     AG
Sbjct: 224 VQSIYLGGGTPTSLNCEQLQSLLEAIQLSLKDDSTIEMTVEGGRPDTLNEDVFALLANAG 283

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+S+  QS+ +++L  +GR H   +   ++  ARN  FP ++ DLI  LP +T+    
Sbjct: 284 VNRLSINPQSMNQKTLDIIGRAHTVEDIYRSVETARNYKFPTLNMDLIIGLPGETVQDVA 343

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++  L    ++L+++ L +++ +   +   +  L+   E VA  ++  T    +A G 
Sbjct: 344 RTMESILQLKPENLTVHALALKRASNLKQRLAEFPLLQAEEAVA--MWQETARGATALGQ 401

Query: 249 HAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           H Y            E   ++  G E ++N+         IG+G GA S+
Sbjct: 402 HPYYMYRQKQMVGNLENIGYALPGHECIYNIQMIEERQTIIGLGVGAGSK 451


>gi|323499668|ref|ZP_08104636.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
 gi|323315269|gb|EGA68312.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
          Length = 462

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +   ++ EI+IE +P  +E++   
Sbjct: 103 ALLQERKVTQLHFGGGTPTFLTKAQISRLMAILRGEFDFENDAEISIEVDPREIELDVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T T++   LQ+ L      LS++        LF      KD DL +  E +A+ L +   
Sbjct: 223 TQTRFAETLQQVLKMEPGRLSIFNYA-HMPQLFAAQRKIKDEDLPVAEEKMAI-LQDTIA 280

Query: 241 SITSA 245
           ++T+A
Sbjct: 281 TLTNA 285


>gi|153955742|ref|YP_001396507.1| coproporphyrinogen III oxidase [Clostridium kluyveri DSM 555]
 gi|219856111|ref|YP_002473233.1| hypothetical protein CKR_2768 [Clostridium kluyveri NBRC 12016]
 gi|146348600|gb|EDK35136.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219569835|dbj|BAH07819.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 482

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++A E ++    S ++ VYV  PFC  +C YC F S+ +  +K   E +I+S + E++ +
Sbjct: 135 VAAKEKDLVNTHSRNISVYVGMPFCPTRCLYCSFTSNPIENFKDLVEPYIESLIYEIRQI 194

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                    +I  I+FGGGTP+ ++ +    I+  I  N+     + E  +E   P S+ 
Sbjct: 195 SSYIKKNKLNIECIYFGGGTPTSVDDEKFKKIICEIYDNFVYGHRIKEFNVECGRPDSMT 254

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           +N  +  +K GVNRIS+  Q++ + +L F+GRNH   +     H+AR   F  ++ D+I 
Sbjct: 255 LNKLKTMKKYGVNRISINPQTMNDSTLEFIGRNHRVEDIKEKFHMARECGFDNINMDIIV 314

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-Y 236
            LP + +   +         + D L+++ +++++G+  Y+   +    L  + V ++L Y
Sbjct: 315 GLPGEGIEHIDKTCTEIEKLSPDSLTVHGMSVKRGSKLYENMINNTKYLTPDAVELNLMY 374

Query: 237 NLTQSITSAHGLHAY 251
             T     A  +  Y
Sbjct: 375 ERTARAAEALNMEPY 389


>gi|288937893|ref|YP_003441952.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
 gi|288892602|gb|ADC60920.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
          Length = 457

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+         R +  + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPQFASRQVKQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDHLRTEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  + +     +H AR I F   + DLIY LPKQT   +   LQ+    
Sbjct: 173 DFNKEVQRLVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQTPESFAFTLQKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       TLF    K  D  LPS    +++   T    +A G
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAEQKLEILQETIGSLTAAG 281


>gi|183597017|ref|ZP_02958510.1| hypothetical protein PROSTU_00249 [Providencia stuartii ATCC 25827]
 gi|188023673|gb|EDU61713.1| hypothetical protein PROSTU_00249 [Providencia stuartii ATCC 25827]
          Length = 457

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R K   + ++Q    E+     L   R+++ + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLQVIEKEIIQRAALLKGRTVTQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   ++ ++  +  ++  S +VE++IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLDKAQVSHLVTLLKTHFHFSDDVEMSIEVDPREIELDMIDHLRSEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +     + R  +     A I+ A+   F   S DLIY LPKQT   +   L++ +  
Sbjct: 173 DFNKDVQVLVNREQDEDFIFALINRAKETGFTSTSIDLIYGLPKQTPESFAFTLKKVIEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + D LS++        LF    K  D  LPS    +D+   T +  ++ G
Sbjct: 233 SPDRLSVFNYA-HLPNLFAAQRKIKDEDLPSAEQKLDILQETIATLTSEG 281


>gi|223939717|ref|ZP_03631589.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
 gi|223891588|gb|EEF58077.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
          Length = 463

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 4/215 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSI 74
           N LG+Y+H PFC K+C +C F  +  +      N+I++ L E  +   +     R  + I
Sbjct: 71  NPLGIYLHIPFCRKRCHFCYFRVYTDKDSASIRNYIEATLKEFAIYATKPAIKGRKPNFI 130

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS +    +  + DG+          E+  EA P ++  +  +  R  GV R+S
Sbjct: 131 YFGGGTPSYLSVDQLKHLTDGMKALLPWDEVEEVAFEAEPGTLTDHKLKAIRDMGVTRLS 190

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGV++ ++  L   GR H++ E   A   AR++ FP+++ DLI  + ++T   W   +++
Sbjct: 191 LGVENFDDHILEINGRAHHSKEIARAYSYARSLGFPQINIDLIAGMVEETDANWRENVRK 250

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLP 227
            +  A D +++Y++ I   T  YK M  +G LV P
Sbjct: 251 TIEMAPDSVTIYEMEIPYNTTIYKQMKAEGKLVAP 285


>gi|292486525|ref|YP_003529391.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           CFBP1430]
 gi|292897762|ref|YP_003537131.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291197610|emb|CBJ44704.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291551938|emb|CBA18975.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           CFBP1430]
          Length = 457

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 14/281 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +L   R++S + +GG
Sbjct: 53  LSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q I  ++  + +++ +S   EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLNKQQIRRLMACLRQHFHISDTAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +Q    + R  +     A +  AR + F   + DLIY LP QT   +   LQ+ +  
Sbjct: 173 DFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQTPASFAFTLQKVVEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-----GLHAYE 252
             D LS++        LF    K  +  LP     + +   T +  +A      G+  + 
Sbjct: 233 DPDRLSIFNYA-HMPALFAAQRKIREAELPDAQQKLAILQQTIATLTAQDYQFIGMDHFA 291

Query: 253 ISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRV 286
             N     A+    L  N+  Y      D +G+G  A SR+
Sbjct: 292 RRNDELAIAQRAGELHRNFQGYTTQGDCDLLGMGVSAISRI 332


>gi|238750771|ref|ZP_04612269.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
           ATCC 43380]
 gi|238710915|gb|EEQ03135.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
           ATCC 43380]
          Length = 459

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 101 LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVIDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAEQRLDILQHTISFL 279

Query: 244 SAHG 247
           +  G
Sbjct: 280 TESG 283


>gi|322835072|ref|YP_004215099.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
 gi|321170273|gb|ADW75972.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
          Length = 457

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 4/245 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+EN      + SL +YVH PFC K C +C  N  V R +   E ++     E+     
Sbjct: 39  TAFENAAARYPARSLSLYVHIPFCHKLCYFCGCNKLVTRQQHKAEEYLNVLEKEISHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ ++   I+ ++  +  ++ +  + E+++E +P  +E++    
Sbjct: 99  LFKGRQVSQLHWGGGTPTYLDKAQISRLMGLLRAHFDILPDAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +     A I  AR + F   + DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQLLVNREQDEDFIFALIARARALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++        LF    K  D  LP     + +  L ++I 
Sbjct: 219 AESFAYTLQRVAELNPDRLSVFNYA-HMPKLFAAQRKIKDADLPGAEEKLKI--LQETIA 275

Query: 244 SAHGL 248
           S  G 
Sbjct: 276 SLTGF 280


>gi|188532192|ref|YP_001905989.1| coproporphyrinogen III oxidase [Erwinia tasmaniensis Et1/99]
 gi|188027234|emb|CAO95073.1| O2-independent coproporphyrinogen III oxidase [Erwinia tasmaniensis
           Et1/99]
          Length = 457

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 15/265 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C +C  N  V R++   ++++ + + E+    +L   R+++ I +GG
Sbjct: 53  LSLYLHIPFCHRLCYFCGCNKQVTRHQHKADDYLAALMQEVAARARLFQRRTVNQIHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +++ +S   EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLNKGQISRLMASLRQHFRISDTAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +Q    + R  +     A I  AR + F   + DLIY LP QT   +   LQ+    
Sbjct: 173 DFNKQVQEKVNRVQDEEGIFALIARARQLGFVSTNIDLIYGLPTQTPESFAFTLQKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D LS++        LF    K  +  LP  +V   L  L Q+I       A     + 
Sbjct: 233 APDRLSVFNYA-HMPALFPAQRKIREAELP--DVQQKLTILQQTIA------ALTAQGYQ 283

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGA 282
           F+G +     ++ R+ D + +   A
Sbjct: 284 FIGMD-----HFARHDDELAVAQRA 303


>gi|261344514|ref|ZP_05972158.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rustigianii DSM 4541]
 gi|282567424|gb|EFB72959.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rustigianii DSM 4541]
          Length = 457

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R K   + ++Q    E+     L   R+++ + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLQVIEKEIIQRAALLKNRTVTQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   ++ ++  + K++  + N E++IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLDKAQVSHLVGLLKKHFHFAPNAEMSIEVDPREIELDMIDHLRSEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++    + R  +     A I  A+   F   S DLIY LPKQT   +   L++    
Sbjct: 173 DFNKEVQILVNREQDEEFIFALIKRAKETGFTSTSIDLIYGLPKQTPESFAFTLKKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           A D LS++        LF    K  D  LP+    +D+   T +  ++ G
Sbjct: 233 APDRLSVFNYA-HLPNLFAAQRKIKDEDLPTAEQKLDILQETIATLTSDG 281


>gi|326204235|ref|ZP_08194094.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325985510|gb|EGD46347.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 434

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 109/189 (57%), Gaps = 5/189 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGG 78
           +Y+H PFC   C  C ++  V   K   E ++++ + E++++ +      I   +++FGG
Sbjct: 57  IYIHVPFCDSFCRDCPYSKSVN--KGNLEKYVRALIKEIEFIGKNKNNSKIRAKAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++    ++ I+ G  K + V  +  IT+E++P S++ +N   YR AG+NRISLG+Q
Sbjct: 115 GTPTVLSAHQLSDII-GKLKEYFVDESTSITLESHPKSLDCDNLSKYRDAGINRISLGIQ 173

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ +GR+++++ A+             + D++Y    +T   +  +L+RA+ + 
Sbjct: 174 SFQDSVLKEMGRDYDSNRALEVARKVSEAGWNFNVDIMYGFDSETDEMFYEDLERAIQFN 233

Query: 199 VDHLSLYQL 207
            +H+S+Y L
Sbjct: 234 ANHISIYGL 242


>gi|296120417|ref|YP_003628195.1| coproporphyrinogen dehydrogenase [Planctomyces limnophilus DSM
           3776]
 gi|296012757|gb|ADG65996.1| Coproporphyrinogen dehydrogenase [Planctomyces limnophilus DSM
           3776]
          Length = 465

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 183/387 (47%), Gaps = 24/387 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIF 75
            LG+Y+H PFC K+C +C F  +  +     E ++++   E++ + QL     R +  ++
Sbjct: 75  PLGLYLHIPFCRKRCKFCYFRVYTNQNAKAIEQYVEALAREVELVSQLPAIQGRKLKFVY 134

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +  + +  + + ++ + +     E+T E  P ++        +  G+ R+SL
Sbjct: 135 FGGGTPSYLSSKQLRFLREKLSAHISWDDAEEVTFECEPGTLHEEKVATLKDIGITRVSL 194

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GV++  +Q L   GR H   E   A   + +  FP+++ DLI  +  +T   W M ++ A
Sbjct: 195 GVENFNDQILEENGRAHKTPEVYRAYEWIQKAGFPQVNIDLIAGMIGETDENWAMNIREA 254

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              A  ++++YQ+ +   T+  K  K+     P  + A     +++++  A G   Y IS
Sbjct: 255 RKLAAQNVTIYQMELPFNTIISKEMKELGTASPVADWATKRRWVSEAM-DALGEDGYHIS 313

Query: 255 NHSFL-----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           + + L       + ++  N WR  D + IG  +   ++ G H   +      E +L  V 
Sbjct: 314 SGNELVKNPTTDQFVYRDNVWRGCDLLAIGVSSFGHLQ-GVHYQNLD---RIEDYLATVE 369

Query: 310 KNGHAVVEKEFLSSEQQ--ADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECERNLQRQ- 365
           + G   V +    +  Q    E++   L+++EG +S   +    G N   E    L  Q 
Sbjct: 370 R-GELPVNRALEPTPHQRLIREWV---LQMKEGQVSAAPFIDKFGINPLEEFRTPLANQA 425

Query: 366 --GFIERVQFSRLRCTQRGMTMLDSVI 390
             G++  V+  R+R T++G+  +DS++
Sbjct: 426 ARGYL-VVEEDRVRLTRKGLLQVDSLL 451


>gi|291527556|emb|CBK93142.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium rectale M104/1]
          Length = 543

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 134/264 (50%), Gaps = 12/264 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  +K   ++++ +   E+ +  Q    + ++SI
Sbjct: 217 DNGYSLYIGIPFCPSTCAYCSFTSYPLGVWKNRVDDYLDALEKEIDYTAQKFYHKKLNSI 276

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  +  ++  I  ++ +   +E T+EA  P S+        +K G++RI
Sbjct: 277 YIGGGTPTTLSPAQLDRLIRKIKCSFDLKDCLEFTVEAGRPDSITKEKLMALKKNGISRI 336

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++Q+L  +GR+H   + I +  LAR + F  ++ DLI  LP++T+      ++
Sbjct: 337 SVNPQTMKQQTLDIIGRHHTVDDTIQSFKLARELGFDNINMDLIMGLPEETLDDVRHTME 396

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                A D+++++ L +++    T+F   + D  +V   E++     +L  +     GL 
Sbjct: 397 LVKELAPDNVTIHSLAVKRAARLTIFKDRYSDMQMVNTQEHM-----DLCAAYCKQMGLE 451

Query: 250 AYEISNHSFLGAESLHNLNYWRYG 273
            Y +     + A ++ N+ Y   G
Sbjct: 452 PYYLYRQKGM-AGNMENVGYAAKG 474


>gi|152972675|ref|YP_001337821.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238892280|ref|YP_002917014.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae NTUH-K2044]
 gi|262041650|ref|ZP_06014843.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|330004714|ref|ZP_08305013.1| coproporphyrinogen dehydrogenase [Klebsiella sp. MS 92-3]
 gi|150957524|gb|ABR79554.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238544596|dbj|BAH60947.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041003|gb|EEW42081.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|328536539|gb|EGF62875.1| coproporphyrinogen dehydrogenase [Klebsiella sp. MS 92-3]
          Length = 457

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 3/229 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+     L   R +  + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPLFATRQVKQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  + +     ++ AR I F   + DLIY LPKQT   +   LQ+    
Sbjct: 173 DFNKEVQRLVNREQDEAFIFDLLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLQKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
             D LS++       TLF    K  D  LPS    +++   T  S+T+A
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAEQKLEILQETIGSLTTA 280


>gi|226323917|ref|ZP_03799435.1| hypothetical protein COPCOM_01694 [Coprococcus comes ATCC 27758]
 gi|225207466|gb|EEG89820.1| hypothetical protein COPCOM_01694 [Coprococcus comes ATCC 27758]
          Length = 282

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 113/200 (56%), Gaps = 3/200 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ V +++   + ++ + L E+ ++ +++  + +++I+
Sbjct: 59  NGYSLYIGIPFCPTTCSYCSFTSYPVAKWQDRMDEYVDALLKELAFIAEVSKEKHLNAIY 118

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +  Q +  +L  + ++++     E TIEA  P S+  +  +  RK GV RIS
Sbjct: 119 MGGGTPTTLSAQQMDRVLSFLEEHFSFEHLKEYTIEAGRPDSITEDKLRVIRKHGVGRIS 178

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H   + +   HLAR + F  ++ DLI  LP +   + E  L++
Sbjct: 179 INPQTMQQKTLDVIGRRHTVEDVVRIFHLARELGFDNINMDLIAGLPGEHPEEMEDTLRQ 238

Query: 194 ALSYAVDHLSLYQLTIEKGT 213
               A D L+++ L ++ G+
Sbjct: 239 IKELAPDSLTVHALAMKHGS 258


>gi|86146589|ref|ZP_01064911.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|218708180|ref|YP_002415801.1| coproporphyrinogen III oxidase [Vibrio splendidus LGP32]
 gi|85835646|gb|EAQ53782.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|218321199|emb|CAV17149.1| Oxygen-independent coproporphyrinogen III oxidase [Vibrio
           splendidus LGP32]
          Length = 463

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 16/297 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  VADYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVIEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I  ++  + + +  +++ EI+IE +P  +E++   
Sbjct: 104 SLLNGRKVTQLHFGGGTPTFLTKTQITRLMGILREEFNFTADAEISIEVDPREIELDVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    IA +  A  + F   + DLIY LPKQ
Sbjct: 164 HLRNEGFNRLSIGVQDFNKEVQKLVNREQDEEFIIAMVQRATELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +  +
Sbjct: 224 TQALFAETLKQVLEMKPGRLSVFNYA-HMPQLFAAQRKIKDEDLPEAKEKMAI-LQDTIE 281

Query: 241 SITSAH----GLHAYEISNHSFLGA--ESLHNLNYWRY-----GDYIGIGPGAHSRV 286
           ++T A     G+  + +       A  E + + N+  Y      D IG G  A S V
Sbjct: 282 TLTGAGYQFIGMDHFALPEDELAVAQREGILHRNFQGYTTQGEADLIGFGVSAISMV 338


>gi|261210176|ref|ZP_05924473.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC341]
 gi|260840716|gb|EEX67265.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC341]
          Length = 462

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  +++    
Sbjct: 103 SLLTGRDVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFTDDAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      KD DL    E +A+    L Q
Sbjct: 223 TAETFAQTLQQVLTMKPGRLSVFNYA-HMPQLFAAQRKIKDADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 278 TITTLTG------AGYQFIGMD 293


>gi|260599980|ref|YP_003212551.1| coproporphyrinogen III oxidase [Cronobacter turicensis z3032]
 gi|260219157|emb|CBA34512.1| Oxygen-independent coproporphyrinogen-III oxidase [Cronobacter
           turicensis z3032]
          Length = 485

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 3/229 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+     L   R +S + +GG
Sbjct: 81  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPLFAGRHVSQLHWGG 140

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++        G  R+S+GVQ
Sbjct: 141 GTPTYLSKAQISRLMGLLRANFEFNDDAEISIEVDPREIELDVLDHLHAEGFRRLSMGVQ 200

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A I  AR + F   + DLIY LPKQT   +   LQR    
Sbjct: 201 DFNKEVQRLVNREQDEDFIFALIKRAREVGFTSANIDLIYGLPKQTPESFAFTLQRVAEL 260

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
             D LS++       TLF    K  +  LPS    +D+   T QS+T A
Sbjct: 261 NPDRLSVFNYA-HLPTLFAAQRKIKEADLPSAQQKLDILQQTIQSLTHA 308


>gi|238764293|ref|ZP_04625244.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           kristensenii ATCC 33638]
 gi|238697444|gb|EEP90210.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           kristensenii ATCC 33638]
          Length = 459

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ +++ + +N+      E +IE +P  +E++    
Sbjct: 101 LFAGRQVSQMHWGGGTPTYLNKTQISHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R    + D LS++       +LF    K  D  LP+    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELSPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTISFL 279

Query: 244 SAHG 247
           +  G
Sbjct: 280 TESG 283


>gi|269140839|ref|YP_003297540.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|267986500|gb|ACY86329.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|304560599|gb|ADM43263.1| Coproporphyrinogen III oxidase, oxygen-independent [Edwardsiella
           tarda FL6-60]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 4/232 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +YVH PFC K C +C  N  V R     + ++     E+     L   R++S + +G
Sbjct: 52  ALSLYVHIPFCHKLCYFCGCNKIVTRQSHKADEYLDKLALEIAARAPLFAGRTVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I+ ++  + +++T +   EI+IE +P  + ++     R+ G NR+S+GV
Sbjct: 112 GGTPTFLNKAQISRLMTLLRRHFTFAPQAEISIEIDPREIALDVLDHLRQEGFNRLSMGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     + R  +     + +  AR I F   + DLIY LP+QT   ++  LQ+ + 
Sbjct: 172 QDFNKTVQTLVNREQDEEFIFSLLRHAREIGFTSTNIDLIYGLPRQTPESFDFTLQKVIE 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              D LS++        LF    K  D  LPS +  + +  L QSI +  G+
Sbjct: 232 LNPDRLSIFNYA-HMPKLFAAQRKIKDADLPSADHKLAI--LQQSIATLTGV 280


>gi|206577088|ref|YP_002241254.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae 342]
 gi|206566146|gb|ACI07922.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae 342]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+         R +  + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIRRAPQFASRQVKQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDHLRTEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  + +     +H AR I F   + DLIY LPKQT   +   LQ+    
Sbjct: 173 DFNKEVQRLVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQTPESFAFTLQKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       TLF    K  D  LP+    +++   T    +A G
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDADLPTAEQKLEILQETIGSLTAAG 281


>gi|148976532|ref|ZP_01813228.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
 gi|145964108|gb|EDK29365.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
          Length = 463

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  VSDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVIEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I  ++  +   +  +++ EI+IE +P  +E++   
Sbjct: 104 SLLNGREVTQLHFGGGTPTFLSKTQITRLMMILRDEFNFTADAEISIEVDPREIELDVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    +A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRNEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVQRAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL    E +A+ L +  +
Sbjct: 224 TQALFAETLKQVLEMKPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQDTIE 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTGA 286


>gi|291524426|emb|CBK90013.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium rectale DSM 17629]
          Length = 531

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 134/264 (50%), Gaps = 12/264 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  +K   ++++ +   E+ +  Q    + ++SI
Sbjct: 205 DNGYSLYIGIPFCPSTCAYCSFTSYPLGVWKNRVDDYLDALEKEIDYTAQKFYHKKLNSI 264

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  +  ++  I  ++ +   +E T+EA  P S+        +K G++RI
Sbjct: 265 YIGGGTPTTLSPAQLDRLIRKIKCSFDLKDCLEFTVEAGRPDSITREKLLALKKNGISRI 324

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++Q+L  +GR+H   + I +  LAR + F  ++ DLI  LP++T+      ++
Sbjct: 325 SVNPQTMKQQTLDIIGRHHTVDDTIQSFKLARELGFDNINMDLIMGLPEETLDDVRHTME 384

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                A D+++++ L +++    T+F   + D  +V   E++     +L  +     GL 
Sbjct: 385 LVKELAPDNVTIHSLAVKRAARLTIFKDRYSDMQMVNTQEHM-----DLCAAYCKQMGLE 439

Query: 250 AYEISNHSFLGAESLHNLNYWRYG 273
            Y +     + A ++ N+ Y   G
Sbjct: 440 PYYLYRQKGM-AGNMENVGYAAKG 462


>gi|37524249|ref|NP_927593.1| coproporphyrinogen III oxidase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783672|emb|CAE12525.1| oxygen-independent coproporphyrinogen III oxidase
           (coproporphyrinogenase) (coprogen oxidase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 457

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  V R K   + ++Q    E++   +L   R +S + +GG
Sbjct: 53  LSLYLHIPFCHKLCYFCGCNKLVTRRKHKADEYLQWLEREIRGRAKLFSGRKVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  ++    + EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKNQISKLMGLLRHHFDFLPDAEISIEIDPREIELDMIDHLRSEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++    + R  +     A +  AR   F   S DLIY LPKQT   +   L+R L+ 
Sbjct: 173 DFNKEVQHLVNREQDEEFIFALVARARETGFNSTSIDLIYGLPKQTPESFAFTLERVLAL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + D +S++       +LF    K  +  LPS    +D+   T +  +++G
Sbjct: 233 SPDRMSVFNYA-HLPSLFAAQRKIKEHDLPSAEQKLDILQETIATLTSNG 281


>gi|194375752|dbj|BAG57220.1| unnamed protein product [Homo sapiens]
          Length = 187

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 80/118 (67%), Gaps = 1/118 (0%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGT
Sbjct: 42  LYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGT 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           PSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+Q
Sbjct: 101 PSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQ 158


>gi|238921707|ref|YP_002935222.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238871276|gb|ACR70987.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Edwardsiella ictaluri 93-146]
          Length = 457

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 4/228 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +YVH PFC K C +C  N  V R     + ++     E+     L   R++S + +G
Sbjct: 52  ALSLYVHIPFCHKLCYFCGCNKIVTRQSHKADEYLDKLALEIAARAPLFAGRTVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I+ ++  + +++T +   EI+IE +P  + ++     R+ G NR+S+GV
Sbjct: 112 GGTPTFLNKAQISRLMMLLRRHFTFAPQAEISIEIDPREIALDVLDHLRQEGFNRLSMGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     + R  + +   + +H AR I F   + DLIY LP+QT   +   LQ+ + 
Sbjct: 172 QDFNKTVQTLVNREQDEAFIFSLLHHAREIGFTSTNIDLIYGLPRQTPESFGFTLQKVIE 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              D LS++        LF    K  D  LPS +  + +  L QSI +
Sbjct: 232 LNPDRLSIFNYA-HMPKLFAAQRKIKDADLPSADHKLAI--LQQSIAT 276


>gi|195970711|gb|ACG60749.1| SAM-dependent oxidase or methyl transferase [Streptomyces
           flavoviridis]
          Length = 424

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 18/295 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQW 61
           LSA  + +       L +YVH PFC+ KC +CD+  +  VRR +  +E   + +L  ++ 
Sbjct: 11  LSAAADVVREDPDKRLAIYVHVPFCLSKCHFCDWVVDIPVRRLRYDEEE-RRDYLDALRT 69

Query: 62  MRQLTGP------RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             +L GP           +++GGGTP+ + P+ +  + + + +++ +S+  + ++E  P+
Sbjct: 70  QIRLYGPLLTGLGYRPEVMYWGGGTPTRLTPRELTHLAETVRESFDLSTLRQWSVETTPN 129

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFD 174
            +  +     R+AGV+R+S+GVQSL E  LR  GR H   +   A+ L R       + D
Sbjct: 130 DLTEDRVAALREAGVDRMSIGVQSLSEYQLRVSGRAHGPDDVTRAVELLRAGGIDNFNVD 189

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           LI   P +T+        R L+    H+S+Y       T+         +          
Sbjct: 190 LISGFPGETLDALGETFDRLLALDPPHVSVYPYRATPKTVMAMQLTRRQIEAHDRTAMTR 249

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLH-----NLNYWRYGDYIGIGPGAHS 284
            Y L+     A G H Y    H +   +  H     N  Y   GD IG G GA S
Sbjct: 250 AYELSMERLRAAGYHEY---CHGYWVRDPAHEDQDGNYKYDLTGDKIGFGSGAES 301


>gi|238925275|ref|YP_002938792.1| coproporphyrinogen dehydrogenase [Eubacterium rectale ATCC 33656]
 gi|238876951|gb|ACR76658.1| coproporphyrinogen dehydrogenase [Eubacterium rectale ATCC 33656]
          Length = 530

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 134/264 (50%), Gaps = 12/264 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  +K   ++++ +   E+ +  Q    + ++SI
Sbjct: 205 DNGYSLYIGIPFCPSTCAYCSFTSYPLGVWKNRVDDYLDALEKEIDYTAQKFYHKKLNSI 264

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  +  ++  I  ++ +   +E T+EA  P S+        +K G++RI
Sbjct: 265 YIGGGTPTTLSPAQLDRLIRKIKCSFDLKDCLEFTVEAGRPDSITREKLLALKKNGISRI 324

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++Q+L  +GR+H   + I +  LAR + F  ++ DLI  LP++T+      ++
Sbjct: 325 SVNPQTMKQQTLDIIGRHHTVDDTIQSFKLARELGFDNINMDLIIGLPEETLDDVRHTME 384

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                A D+++++ L +++    T+F   + D  +V   E++     +L  +     GL 
Sbjct: 385 LVKDMAPDNVTIHSLAVKRAARLTIFKDRYSDMQMVNTQEHM-----DLCAAYCKQMGLE 439

Query: 250 AYEISNHSFLGAESLHNLNYWRYG 273
            Y +     + A ++ N+ Y   G
Sbjct: 440 PYYLYRQKGM-AGNMENVGYAAKG 462


>gi|296268533|ref|YP_003651165.1| Coproporphyrinogen dehydrogenase [Thermobispora bispora DSM 43833]
 gi|296091320|gb|ADG87272.1| Coproporphyrinogen dehydrogenase [Thermobispora bispora DSM 43833]
          Length = 404

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 185/403 (45%), Gaps = 47/403 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF--NSHVRRYKVGQEN-----FIQSFLTEMQW----MRQ 64
           +  L +YV+ PFC  KC +CD+     VR  ++ Q+      ++ +   +++     +R+
Sbjct: 2   TRPLLLYVNIPFCNSKCHFCDWVVQIPVRDLRLDQQAPGRIAYLDAVRAQIRGQAPVLRE 61

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P   + I++GGGT S++    I  +   +   + +S   E TIE +P S+     + 
Sbjct: 62  HYQP---AIIYWGGGTASILGESEIESLYTCLRSEFDLSHVRETTIEGSPESLTPQKLRR 118

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G +RIS+GVQS ++Q LR LGR H+A +A+  +  A    F  ++ DLI   P QT
Sbjct: 119 LRELGFDRISIGVQSFDDQRLRRLGRAHSAEQAVEVVKNAHAAGFRNINIDLIVGFPGQT 178

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSI 242
             +    ++ AL+  ++H S+Y      GT+  K + + G L L   N  +  Y +T+ +
Sbjct: 179 DAEVAESVRTALTLPINHFSIYPYRASPGTILRKQVERGGHLDL---NRQLAAYYITRDL 235

Query: 243 TSAHGLHAYEISNHSFLGAESLH-NLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIEKH 300
               G   Y +   S+ GA     +  Y+R   D+IG G GA+S +    HR        
Sbjct: 236 LEEAGFPEYAM---SYFGAPRCEADQAYYRLTMDWIGFGSGANSLL---GHR-------- 281

Query: 301 PESWLKMVRKNGHAVVEKEF-------LSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              +L   +   HA  +           SS Q    +L   L   EG+  + ++   G  
Sbjct: 282 ---YLAFRKGRLHAYNQNPLRFDVNAPASSPQLTLHWLSQALTTVEGMDARVYQERTGTP 338

Query: 354 LDIECERNLQRQGFIERV-QFSRLRCTQRGMTMLDSVIANLAV 395
           L + CE   + Q ++ R+ +  RL   + G+ +    IA + +
Sbjct: 339 LRVACEEP-EVQAYLRRMSEHGRLIIDRNGIRIHREDIARVII 380


>gi|294634248|ref|ZP_06712791.1| oxygen-independent coproporphyrinogen III oxidase [Edwardsiella
           tarda ATCC 23685]
 gi|291092335|gb|EFE24896.1| oxygen-independent coproporphyrinogen III oxidase [Edwardsiella
           tarda ATCC 23685]
          Length = 457

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  +      +L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFQRAVVRYPERALSLYVHIPFCHKLCYFCGCNKIVTRQTHKADEYLDKLALEIAARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +    I+ ++  +  ++  +   EI+IE +P  +E++    
Sbjct: 99  LFAGRTVSQLHWGGGTPTYLNKAQISRLMALLRTHFHFAPQAEISIEIDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   + + R  + +   A +  AR I F   + DLIY LP+QT
Sbjct: 159 LRHEGFNRLSMGVQDFNKTVQQLVNREQDEAFIFALLRHAREIGFTSTNIDLIYGLPRQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ +    D LS++        LF    K  D  LPS +  + +  L QSI 
Sbjct: 219 PESFAFTLQKVIELNPDRLSIFNYA-HMPKLFAAQRKIKDADLPSADHKLAI--LQQSIA 275

Query: 244 SAHGL 248
           +  G+
Sbjct: 276 TLTGV 280


>gi|258623138|ref|ZP_05718150.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM573]
 gi|258584621|gb|EEW09358.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM573]
          Length = 480

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  ++++   
Sbjct: 121 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLDVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      KD DL    E +A+    L Q
Sbjct: 241 TAETFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKDADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +I +  G      + + F+G +
Sbjct: 296 TIATLTG------AGYQFIGMD 311


>gi|312170593|emb|CBX78856.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           ATCC BAA-2158]
          Length = 457

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 14/281 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +L   R++S + +GG
Sbjct: 53  LSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q I  ++  + +++ +S   EI+IE +P   E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLNKQQIRRLMACLRQHFHISDTAEISIEVDPRETELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +Q    + R  +     A +  AR + F   + DLIY LP QT   +   LQ+ +  
Sbjct: 173 DFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQTPASFAFTLQKVVEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-----GLHAYE 252
             D LS++        LF    K  +  LP     + +   T +  +A      G+  + 
Sbjct: 233 DPDRLSIFNYA-HMPALFAAQRKIREAELPDAQQKLAILQQTIATLTAQDYQFIGMDHFA 291

Query: 253 ISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRV 286
             N     A+    L  N+  Y      D +G+G  A SR+
Sbjct: 292 RRNDELAIAQRAGELHRNFQGYTTQGDCDLLGMGVSAISRI 332


>gi|332159651|ref|YP_004296228.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325663881|gb|ADZ40525.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330858977|emb|CBX69336.1| oxygen-independent coproporphyrinogen-III oxidase [Yersinia
           enterocolitica W22703]
          Length = 457

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQRLDILQHTISFL 277

Query: 244 SAHG 247
           +  G
Sbjct: 278 TESG 281


>gi|156936146|ref|YP_001440062.1| coproporphyrinogen III oxidase [Cronobacter sakazakii ATCC BAA-894]
 gi|156534400|gb|ABU79226.1| hypothetical protein ESA_04045 [Cronobacter sakazakii ATCC BAA-894]
          Length = 457

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 3/229 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPLFAGRRVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++        G  R+S+GVQ
Sbjct: 113 GTPTYLSKAQISRLMGLLRANFRFNDDAEISIEVDPREIELDVLDHLHAEGFRRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A I  AR + F   + DLIY LPKQT   +   LQR    
Sbjct: 173 DFNKEVQRLVNREQDEDFIFALIKRAREVGFTSANIDLIYGLPKQTPESFAFTLQRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
             D LS++       TLF    K     LPS    +D+   T QS+T A
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKKADLPSAQQKLDILQQTIQSLTHA 280


>gi|262172875|ref|ZP_06040553.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           MB-451]
 gi|261893951|gb|EEY39937.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           MB-451]
          Length = 462

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  ++++   
Sbjct: 103 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLDVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      KD DL    E +A+    L Q
Sbjct: 223 TAETFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKDADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +I +  G      + + F+G +
Sbjct: 278 TIATLTG------AGYQFIGMD 293


>gi|320157734|ref|YP_004190113.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           vulnificus MO6-24/O]
 gi|319933046|gb|ADV87910.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           vulnificus MO6-24/O]
          Length = 463

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I  ++  + + +T ++  EI+IE +P  + +    
Sbjct: 104 SLLQGRRVTQLHFGGGTPTFLSAKQITRLMTLLREEFTFTAEAEISIEVDPREIALEMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRAEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVERAKQLGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
               +   L++ LS     LS++        LF      KD DL    E +A+ L N   
Sbjct: 224 DRDSFAKTLEQVLSMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQNTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTDA 286


>gi|318603745|emb|CBY25243.1| coproporphyrinogen III oxidase,oxygen-independent [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 457

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQRLDILQHTISFL 277

Query: 244 SAHG 247
           +  G
Sbjct: 278 TESG 281


>gi|37678377|ref|NP_932986.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
 gi|37197116|dbj|BAC92957.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           vulnificus YJ016]
          Length = 463

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I  ++  + + +T ++  EI+IE +P  + +    
Sbjct: 104 SLLQGRRVTQLHFGGGTPTFLSAKQITRLMTLLREEFTFTAEAEISIEVDPREIALEMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRAEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVERAKQLGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
               +   L++ LS     LS++        LF      KD DL    E +A+ L N   
Sbjct: 224 DRDSFAKTLEQVLSMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQNTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTDA 286


>gi|290473291|ref|YP_003466157.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Xenorhabdus bovienii SS-2004]
 gi|289172590|emb|CBJ79359.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Xenorhabdus bovienii SS-2004]
          Length = 457

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 7/253 (2%)

Query: 1   MKYLSAYENNMTGQGS-----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           +++   Y+N    Q +       L +Y+H PFC K C +C  N  V R K   ++++   
Sbjct: 30  LEFNQQYDNTAFAQAAARYPDRPLSLYIHIPFCHKLCYFCGCNKLVTRQKHKADDYLNIL 89

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             E+    +L   R +S + +GGGTP+ ++   I+ ++  +  ++      E++IE +P 
Sbjct: 90  EKEITARARLFSQRKVSQMHWGGGTPTYLDKTQISRLMSVLRSHFDFLPESELSIEIDPR 149

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
            +E++     R  G NR+S+GVQ   ++    + R  +       ++ AR   F   S D
Sbjct: 150 EIELDVIDHLRHEGFNRLSMGVQDFNKEVQHLVNREQDEDFIFELVNRARETGFISTSID 209

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           LIY LPKQT   +   LQR L+ + D LS++        LF    K  +  LPS    +D
Sbjct: 210 LIYGLPKQTSESFAFTLQRVLALSPDRLSVFNYA-HLPDLFAAQRKIKEHDLPSAEQKLD 268

Query: 235 LYNLTQSITSAHG 247
           +   T +  + +G
Sbjct: 269 ILQGTIATLTGNG 281


>gi|238785633|ref|ZP_04629611.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           bercovieri ATCC 43970]
 gi|238713468|gb|EEQ05502.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           bercovieri ATCC 43970]
          Length = 462

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 44  AAFQRAVQRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 103

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+    + E +IE +P  +E++    
Sbjct: 104 LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPDAEQSIEVDPREIELDVLDH 163

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 164 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 223

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 224 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQRLDILQHTISFL 282

Query: 244 SAHG 247
           +  G
Sbjct: 283 TESG 286


>gi|153816119|ref|ZP_01968787.1| hypothetical protein RUMTOR_02367 [Ruminococcus torques ATCC 27756]
 gi|317502042|ref|ZP_07960224.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090442|ref|ZP_08339323.1| hypothetical protein HMPREF1025_02906 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846604|gb|EDK23522.1| hypothetical protein RUMTOR_02367 [Ruminococcus torques ATCC 27756]
 gi|316896516|gb|EFV18605.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401189|gb|EGG80782.1| hypothetical protein HMPREF1025_02906 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 492

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 116/211 (54%), Gaps = 3/211 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   +YV  PFC   C YC F+S  +  +K   E+++ + L E++ + +++      S++
Sbjct: 166 DGFSLYVGIPFCPSVCSYCSFSSSPIAEWKDKVESYLFALLKEIRAIGKMSEGHRPDSVY 225

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +E + +  +L  I +N+ +S+ +E T+EA  P S+        RK  V RIS
Sbjct: 226 IGGGTPTTLEAEQMDRLLKTITENFDLSNVLEFTVEAGRPDSITEEKLAVIRKYPVTRIS 285

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GRNH  ++   A +LAR + F  ++ DLI  LP +  +  E  L++
Sbjct: 286 INPQTMQQKTLDLVGRNHTVAQTKDAFYLARKLGFDNINMDLIAGLPGEDASDMEDTLRQ 345

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                 D L+++ L I++   + +  +  DL
Sbjct: 346 VEEMHPDSLTVHALAIKRAARYGQEGRKQDL 376


>gi|90581068|ref|ZP_01236868.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
 gi|90437764|gb|EAS62955.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
          Length = 457

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 2/231 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFC K C YC  N  + R++   ++++     E++    L G R +S + +G
Sbjct: 52  KLSLYIHIPFCHKLCYYCGCNKIITRHQHKADDYLDKLEQEIKQRATLLGDRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I+ +++ +   +    + EI+IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLTAAQISRLMNSLRAAFNFDDDAEISIEVDPREIELDILDHLRSEGFNRLSIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +   + + R  + +   A +  AR + F   + DLIY LP Q    +   L++ L+
Sbjct: 172 QDFNKDVQKLVNREQDETFIFAMVERARELGFRSTNLDLIYGLPLQNREMFAKTLEQVLA 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                LS++        LF    K  + +LPS    + +   T +  +A G
Sbjct: 232 MNPGRLSVFNYA-HMPKLFAAQRKISEELLPSAKEKLGILQDTIATLTAAG 281


>gi|238790753|ref|ZP_04634513.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           frederiksenii ATCC 33641]
 gi|238721151|gb|EEQ12831.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           frederiksenii ATCC 33641]
          Length = 457

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAV 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R +    D LS++       +LF    K  D  LP+    +D+   T S  
Sbjct: 219 AESFAFTLKRVVELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTISFL 277

Query: 244 SAHG 247
           +  G
Sbjct: 278 TESG 281


>gi|28210562|ref|NP_781506.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
 gi|28202999|gb|AAO35443.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 460

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC   CPYC +N  V   K   +++  S + E++  ++    ++I+S++ GGG
Sbjct: 73  GIYIHIPFCKSICPYCPYNK-VLYEKEKAKDYKNSLMKEIKMYKKYLKNKNITSLYIGGG 131

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+  + +  +++ I   +  + N  I IE  P+ V        +  GVN +SLGVQ+
Sbjct: 132 TPTLLVDE-LNEVINYIKDEFEFNGN--IGIEIYPTEVSEELLTKLKSLGVNLLSLGVQT 188

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+FLGR +   +   A+  + +  F  +  D++  LP QT+   E +L++  SY 
Sbjct: 189 FNDDKLKFLGRKYTVKDIENALEKIEKFNFKCVDIDIMTNLPGQTIEDIEQDLRKVYSYN 248

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +  LS+Y L +   T   K+ ++  L   SE     + N+   ++   G   YE S+   
Sbjct: 249 IHQLSIYPLIVFPMTPMDKIIREKKLKRFSELGERKILNIIDKVSKECG---YERSSIWT 305

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS 284
            G    +         +IGIG GA S
Sbjct: 306 YGKSEDNRYTSVTRESFIGIGAGASS 331


>gi|123440427|ref|YP_001004421.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087388|emb|CAL10169.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 457

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LP+    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTISFL 277

Query: 244 SAHG 247
           +  G
Sbjct: 278 TESG 281


>gi|260767544|ref|ZP_05876480.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio furnissii
           CIP 102972]
 gi|260617444|gb|EEX42627.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio furnissii
           CIP 102972]
 gi|315178736|gb|ADT85650.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio furnissii
           NCTC 11218]
          Length = 462

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDILEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I+ ++  + + +   ++ EI+IE +P  ++++   
Sbjct: 103 SLLVGRHVTQLHFGGGTPTFLTNKQISRLMTLLREEFQFDADAEISIEVDPREIQLDVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ  +++  + + R  +    I  +   + + F   + DLIY LPKQ
Sbjct: 163 HLRSEGFNRLSIGVQDFDKEVQKLVNREQDEQFIIDLVARGKALGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T+  +   L + L+     LS++        LF      KD DL  P E +A+  Y +  
Sbjct: 223 TLETFSQTLAQVLAMKPGRLSVFNYA-HMPQLFAAQRKIKDEDLPAPEEKMAILQYTIN- 280

Query: 241 SITSA 245
           ++T A
Sbjct: 281 TLTDA 285


>gi|258626628|ref|ZP_05721458.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM603]
 gi|258581132|gb|EEW06051.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM603]
          Length = 480

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  +++    
Sbjct: 121 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      KD DL    E +A+    L Q
Sbjct: 241 TAETFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKDADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +I +  G      + + F+G +
Sbjct: 296 TIVTLTG------AGYQFIGMD 311


>gi|291539588|emb|CBL12699.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Roseburia intestinalis XB6B4]
          Length = 506

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 138/267 (51%), Gaps = 18/267 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SI 71
            N   +Y+  PFC   C YC F S+     V  +N + ++L  ++     T  +    ++
Sbjct: 179 DNGYSLYIGIPFCPTTCLYCSFTSYPL---VSWKNRVDAYLDALEREIDYTAAKFYHKNL 235

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +SI+ GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +  RK G+
Sbjct: 236 NSIYIGGGTPTTLEPYQLDRLIRKIKCSFDLSDCLEFTVEAGRPDSITREKLEVLRKWGI 295

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            RIS+  Q++++++L  +GR H+  + + +  +AR + F  ++ DLI  LP++++     
Sbjct: 296 TRISINPQTMQQRTLDLIGRRHSVEQTVESFKIARELGFDDINMDLIMGLPEESLEDVRD 355

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            L++ +    D+L+++ L +++     +F + +KD  +V   E++     +LT S     
Sbjct: 356 TLEQIMQLKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTQEHM-----DLTASYAKKM 410

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG 273
            L  Y +     + A +L N+ Y + G
Sbjct: 411 DLFPYYLYRQKGM-AGNLENVGYAKEG 436


>gi|262404853|ref|ZP_06081407.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC586]
 gi|262348937|gb|EEY98076.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC586]
          Length = 462

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  +++    
Sbjct: 103 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      KD DL    E +A+    L Q
Sbjct: 223 TAETFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKDADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +I +  G      + + F+G +
Sbjct: 278 TIATLTG------AGYQFIGMD 293


>gi|27364342|ref|NP_759870.1| coproporphyrinogen III oxidase [Vibrio vulnificus CMCP6]
 gi|27360461|gb|AAO09397.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           vulnificus CMCP6]
          Length = 463

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I  ++  + + +T ++  EI+IE +P  + +    
Sbjct: 104 SLLQGRRVTQLHFGGGTPTFLSAKQITRLMTLLREEFTFTAEAEISIEVDPREIALEMLG 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+ + F   + DLIY LPKQ
Sbjct: 164 HLRAEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVERAKQLGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
               +   L++ LS     LS++        LF      KD DL    E +A+ L N   
Sbjct: 224 DRDSFAKTLEQVLSMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPKAEEKMAI-LQNTIA 281

Query: 241 SITSA 245
           ++T A
Sbjct: 282 TLTDA 286


>gi|319646743|ref|ZP_08000972.1| HemZ protein [Bacillus sp. BT1B_CT2]
 gi|317391331|gb|EFV72129.1| HemZ protein [Bacillus sp. BT1B_CT2]
          Length = 528

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 31/291 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQ----WMRQLTGPRS 70
           + +Y+  PFC  KC YC F ++  R   GQ   + SFL     EMQ    W+++     S
Sbjct: 197 VSIYIGIPFCPTKCAYCTFPAYAIR---GQAGRVGSFLWGLHYEMQKIGEWLKE--NDVS 251

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKA 128
           I++++FGGGTP+ I  + + L+ + + +++    N+ E+T+EA  P ++        +K 
Sbjct: 252 ITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVTVEAGRPDTITEEKLAVLKKW 311

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            ++RIS+  QS E ++L+ +GR+H   E I   HL+RN     ++ DLI  LP + + ++
Sbjct: 312 NIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRNAGMSNINMDLIIGLPGEGVKEF 371

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L        + L+++ L+ ++ +   K      +    E VA  + +   S T  HG
Sbjct: 372 RHSLSETEKLMPESLTVHTLSFKRASEMTKNRHKYKVADREEIVA--MMDDAVSWTKQHG 429

Query: 248 LHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR 285
            H Y            E   +S  G ES++N+         IGIG GA S+
Sbjct: 430 YHPYYLYRQKNILGNLENIGYSLPGQESIYNIMIMEEKQTIIGIGCGAASK 480


>gi|258592773|emb|CBE69082.1| putative Coproporphyrinogen dehydrogenase [NC10 bacterium 'Dutch
           sediment']
          Length = 458

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 2/192 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            ++VH PFC  KC YCDF ++  R     E ++     +++ +  + G  ++ S+ FGGG
Sbjct: 54  AMHVHIPFCRTKCTYCDFLAYYGRSDSEIERYLDLLRQDIRVVAGMAGHVAVESMEFGGG 113

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQ 138
           TPSL+  + +A I+DG+   +  S + ++T+E  P +S+  N   G+++ G+ R+S GVQ
Sbjct: 114 TPSLLSVEQVAAIMDGVRARFRFSPDADVTMEVLPDTSITTNLMAGWKREGITRLSFGVQ 173

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            L++   + L R     E +  +   R   F   S DL+  LP+QT   W    Q  L  
Sbjct: 174 FLDDDLKKKLNREDTTEEILRILRSVREAGFDDFSVDLMCGLPEQTEESWRHTCQEILRL 233

Query: 198 AVDHLSLYQLTI 209
              H+ ++ +++
Sbjct: 234 HPPHVCVFPVSV 245


>gi|269103714|ref|ZP_06156411.1| coproporphyrinogen III oxidase oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268163612|gb|EEZ42108.1| coproporphyrinogen III oxidase oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 457

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 14/248 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH PFC K C YC  N  + R++   + ++ +   E+     L GPR +S + +G
Sbjct: 52  KLSLYVHIPFCHKLCYYCGCNKVITRHQEKADVYLDALALEIAQRAALCGPRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + I  +++ + +++   ++ EI+IE +P  +E++     R+ G NRIS+GV
Sbjct: 112 GGTPTFLTKEQITRLMNLLREHFDFDADAEISIEIDPRRIELDMLDHLRQEGFNRISIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R  +       +  A+ + F   + DLIY LP Q    +   L   L 
Sbjct: 172 QDFNKEVQKVINREQDEKFIFDLVQRAKELGFRSTNLDLIYGLPLQNQQAFSDTLHEVLK 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD--LVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                LS++        LF    K  D  L  P E +A+    L QSI +  G      +
Sbjct: 232 MKPGRLSVFNYA-HMPQLFAAQRKIKDEWLPGPKEKLAM----LQQSIATLTG------A 280

Query: 255 NHSFLGAE 262
            + F+G +
Sbjct: 281 GYQFIGMD 288


>gi|52784833|ref|YP_090662.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|163119326|ref|YP_078263.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52347335|gb|AAU39969.1| HemZ [Bacillus licheniformis ATCC 14580]
 gi|145902832|gb|AAU22625.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
          Length = 502

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 31/291 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQ----WMRQLTGPRS 70
           + +Y+  PFC  KC YC F ++  R   GQ   + SFL     EMQ    W+++     S
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIR---GQAGRVGSFLWGLHYEMQKIGEWLKE--NDVS 225

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKA 128
           I++++FGGGTP+ I  + + L+ + + +++    N+ E+T+EA  P ++        +K 
Sbjct: 226 ITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVTVEAGRPDTITEEKLAVLKKW 285

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            ++RIS+  QS E ++L+ +GR+H   E I   HL+RN     ++ DLI  LP + + ++
Sbjct: 286 NIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRNAGMSNINMDLIIGLPGEGVKEF 345

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L        + L+++ L+ ++ +   K      +    E VA  + +   S T  HG
Sbjct: 346 RHSLSETEKLMPESLTVHTLSFKRASEMTKNRHKYKVADREEIVA--MMDDAVSWTKQHG 403

Query: 248 LHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR 285
            H Y            E   +S  G ES++N+         IGIG GA S+
Sbjct: 404 YHPYYLYRQKNILGNLENIGYSLPGQESIYNIMIMEEKQTIIGIGCGAASK 454


>gi|300702555|ref|YP_003744155.1| coproporphyrinogen III oxidase [Ralstonia solanacearum CFBP2957]
 gi|299070216|emb|CBJ41507.1| Coproporphyrinogen III oxidase [Ralstonia solanacearum CFBP2957]
          Length = 491

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I++   EM  + +  GP R  + + +G
Sbjct: 76  LSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMAMIARHIGPLRQATQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ ++S+ EI++E +P     +        G NR SLG+
Sbjct: 136 GGTPTFLSHDEMRDVMTATREHFALTSDAEISVELDPRHAGDDTLAVLADLGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  +    +  AR + F  +SFDLIY LP Q +  +   L R L 
Sbjct: 196 QDFDADVQRAIHRVQSVEQTRRVVDSARRLGFQSISFDLIYGLPHQHIDTFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A D LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKPQRRIDALALPSADEKLDLLAMT 297


>gi|160893488|ref|ZP_02074273.1| hypothetical protein CLOL250_01039 [Clostridium sp. L2-50]
 gi|156864883|gb|EDO58314.1| hypothetical protein CLOL250_01039 [Clostridium sp. L2-50]
          Length = 497

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 18/285 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC  +C YC F S+ +  YK   + ++ +   EM+++      + + SI+
Sbjct: 167 NEYCLYIGIPFCPTRCLYCSFTSYPIGVYKDKVDAYLDTMEKEMEYVAASYTEKKLVSIY 226

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTPS I  + +  +   I K++ +S   E TIEA  P S   +  Q  +  GV RIS
Sbjct: 227 IGGGTPSSISAEQMDRLCSMIEKHFDLSQVREYTIEAGRPDSTTADKLQVMKAHGVGRIS 286

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++  ++L+ +GR H   +A  A   AR + F  ++ DLI  LP +     +  L++
Sbjct: 287 INPQTMNGETLKLIGRAHTPEQAEEAFKRAREVGFDNINMDLIVGLPGEDAEMVKRTLEK 346

Query: 194 ALSYAVDHLSLYQLTIEKGT-LFYKMHK-------DGDLVL---PSENVAVDLYNLTQSI 242
               A + L+++ L I++   L  +M K       D  L L    +E + +  Y L +  
Sbjct: 347 VKKLAPESLTVHTLAIKRAAHLKQEMDKYSFAGDVDEQLSLVGQAAEELGLAPYYLYRQK 406

Query: 243 TSAHGLHAYEISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSRV 286
             A  L     + H   G E L+N L      D IGIG G+ S++
Sbjct: 407 NMAGNLENVGYARH---GLECLYNILIMEERTDIIGIGAGSSSKL 448


>gi|304411967|ref|ZP_07393577.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|307305862|ref|ZP_07585608.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
 gi|304349517|gb|EFM13925.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|306911355|gb|EFN41781.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
          Length = 458

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 43  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 99  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             +KAG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 159 TLKKAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 219 TPETFAVTMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 275

Query: 243 TSAHG 247
            +  G
Sbjct: 276 ETLTG 280


>gi|291535024|emb|CBL08136.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Roseburia intestinalis M50/1]
          Length = 500

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 137/264 (51%), Gaps = 12/264 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  +K   + ++ +   E+ +       + ++SI
Sbjct: 173 DNGYSLYIGIPFCPTTCLYCSFTSYPLVSWKNRVDAYLDALEKEIDYTAAKFYHKHLNSI 232

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +  RK G+ RI
Sbjct: 233 YIGGGTPTTLEPYQLDRLIRKIKCSFDLSDCLEFTVEAGRPDSITREKLEVLRKWGITRI 292

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H+  + + +  +AR + F  ++ DLI  LP++++      L+
Sbjct: 293 SINPQTMQQRTLDLIGRRHSVEQTVESFKIARELGFDDINMDLIMGLPEESLEDVRDTLE 352

Query: 193 RALSYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           + +    D+L+++ L +++     +F + +KD  +V   E++     +LT S      L 
Sbjct: 353 QIMQLKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTQEHM-----DLTASYAKKMDLF 407

Query: 250 AYEISNHSFLGAESLHNLNYWRYG 273
            Y +     + A +L N+ Y + G
Sbjct: 408 PYYLYRQKGM-AGNLENVGYAKEG 430


>gi|157373115|ref|YP_001481104.1| coproporphyrinogen III oxidase [Serratia proteamaculans 568]
 gi|157324879|gb|ABV43976.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           proteamaculans 568]
          Length = 457

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 4/241 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFQRAAARYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQTHKADEYLAVLAQEIAQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +  + +GGGTP+ +    I+ ++  + +++    ++E++IE +P  +E++    
Sbjct: 99  LFAGRKVGQLHWGGGTPTYLSKSQISKLVAMLRQHFDFLPDLEMSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQRLVNREQDETFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++        LF    K  D  LPS    +D+  L Q+I 
Sbjct: 219 PESFAYTLQRVAELNPDRLSVFNYA-HMPNLFAAQRKIKDADLPSAQQKLDI--LQQTIA 275

Query: 244 S 244
           S
Sbjct: 276 S 276


>gi|254508283|ref|ZP_05120406.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
 gi|219548800|gb|EED25802.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
          Length = 462

 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VSDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 ALLQERKVTQLHFGGGTPTFLTKAQISRLMAILRGEFCFEGDAEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVARAKELGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL +  E +A+ L +   
Sbjct: 223 TKDSFAETLKQVLEMQPGRLSVFNYA-HMPQLFAAQRKIKDEDLPVAEEKMAI-LQDTIA 280

Query: 241 SITSA 245
           ++T A
Sbjct: 281 TLTDA 285


>gi|251791715|ref|YP_003006436.1| coproporphyrinogen III oxidase [Dickeya zeae Ech1591]
 gi|247540336|gb|ACT08957.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya zeae
           Ech1591]
          Length = 457

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 3/243 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +Y+H PFC + C +C  N  V R     + ++     E+     
Sbjct: 39  AAFAQAVARYPHRPLSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDRLALEIHQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ +    I+ ++  + +++  S + E+++E +P  +E++    
Sbjct: 99  LFANRTVTQMHWGGGTPTFLNKAQISRLMALLRRHFHFSEHAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFASTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSI 242
              +   LQR      D LS++        LF    K  D  LP +E     L    QS+
Sbjct: 219 PDSFAFTLQRVAELRPDRLSVFNYA-HLPNLFAAQRKIKDADLPDAEQKLAILQQTIQSL 277

Query: 243 TSA 245
           T+A
Sbjct: 278 TAA 280


>gi|330444875|ref|ZP_08308530.1| oxygen-independent coproporphyrinogen III oxidase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489185|dbj|GAA03027.1| oxygen-independent coproporphyrinogen III oxidase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 457

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 2/212 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFC K C YC  N  + R++   + ++ +   E++    L G R +S + +G
Sbjct: 52  KLSLYIHIPFCHKLCYYCGCNKIITRHQHKADQYLDALEQEIKQRATLLGDRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + I+ +++ +  ++    + EI+IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLTAEQISRLMNSLRASFNFDDDAEISIEVDPREIELDILDHLRSEGFNRLSIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +   + + R  +     A +  AR + F   + DLIY LP Q    +   L++ L 
Sbjct: 172 QDFNKDVQKLVNREQDEQFIFAMVERARELGFRSTNLDLIYGLPLQNREVFAQTLEQVLK 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
                LS++        LF    K  + +LPS
Sbjct: 232 MNPGRLSVFNYA-HMPKLFAAQRKISEELLPS 262


>gi|114049487|ref|YP_740037.1| coproporphyrinogen III oxidase [Shewanella sp. MR-7]
 gi|113890929|gb|ABI44980.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           MR-7]
          Length = 446

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    +++ + +GGGTP+ + P+ I  + D I  N+  ++  E +IE +P  +E++   
Sbjct: 87  PLFKHYTVTQMHWGGGTPTFLNPEQILKLTDLIKANFNFAAEGEFSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 207 TPETFAATMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 263

Query: 243 TSAHG 247
            +  G
Sbjct: 264 ETLTG 268


>gi|117922547|ref|YP_871739.1| coproporphyrinogen III oxidase [Shewanella sp. ANA-3]
 gi|117614879|gb|ABK50333.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           ANA-3]
          Length = 446

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    +++ + +GGGTP+ + P+ I  + D I  N+  ++  E +IE +P  +E++   
Sbjct: 87  PLFKHYTVTQMHWGGGTPTFLNPEQILKLTDLIKANFNFAAEGEFSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 207 TPETFAATMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 263

Query: 243 TSAHG 247
            +  G
Sbjct: 264 ETLTG 268


>gi|182420366|ref|ZP_02951588.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           butyricum 5521]
 gi|237668230|ref|ZP_04528214.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase) [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182375732|gb|EDT73330.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           butyricum 5521]
 gi|237656578|gb|EEP54134.1| coproporphyrinogen dehydrogenase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 475

 Score =  112 bits (280), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 138/274 (50%), Gaps = 10/274 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E  +  + +N++ +Y+   FC  KC YC F S+ +  +K     ++QS + E++ + +  
Sbjct: 137 EERIVNKDNNTIAIYIGMAFCPTKCMYCSFTSNPIGSHKKMVMPYVQSLMKEIKEISKYV 196

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +  ++ +++FGGGTP+ +      +++D I   +    NV E T+E   P ++     
Sbjct: 197 KEKKLNVETVYFGGGTPTSVSDGEFMMVMDEIYDGFIKDGNVKEFTVECGRPDTLNKTKL 256

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q  +   V RIS+  Q++ +++L+ +GR H+  +     H+AR + F  ++ D+I  LP 
Sbjct: 257 QTMKDCNVTRISINPQTMNDKTLKLIGRTHSCEDIKEKFHMARQLGFDDINMDIIIGLPG 316

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVDLYNLT 239
           +   +             D ++++ L +++G++ Y+  + K G  + P E + V +Y  +
Sbjct: 317 EGHAEVLKTKDEIFKLKPDSITVHGLALKRGSIMYENFVLKKGIPITPHEEI-VKMYEES 375

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +++  + GL  Y +     +   ++ NL Y + G
Sbjct: 376 KNLAESLGLSPYYMYRQKNMVG-NMENLGYAKEG 408


>gi|304440197|ref|ZP_07400087.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304371246|gb|EFM24862.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 450

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 119/214 (55%), Gaps = 7/214 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           ENN+     +++ +Y H PFC   C YC F ++ +  K   + +I + + E + + +   
Sbjct: 134 ENNIFSNKRSNISLYFHIPFCPSICSYCSFTTY-KTDKNKMDIYIDNLIKEFKSVNKEII 192

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
           P   +SI+ GGGTP+ ++  N+  +L  I     +  N E T+E   P +++       +
Sbjct: 193 P---TSIYIGGGTPTALDNYNLERLLYEIQNKIDI--NCEYTVECGRPDTIDEKKLDILK 247

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           K GVNRIS+  Q++++++L+ +GR H+  + + A +LA++    ++ DLI  LP +T+  
Sbjct: 248 KYGVNRISINPQTMKDETLKTIGRTHSTEDILIAYNLAKDKGFIINMDLIVGLPDETIDD 307

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
               L++ +    ++++++ L+I+ G+  YK +K
Sbjct: 308 VNNSLEKIIELNPENITVHSLSIKNGSRLYKENK 341


>gi|238794560|ref|ZP_04638168.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           intermedia ATCC 29909]
 gi|238726140|gb|EEQ17686.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           intermedia ATCC 29909]
          Length = 459

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEICQRAT 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R +S + +GGGTP+ +  + I  +++ +  N+      E +IE +P  +E++    
Sbjct: 101 FFAGRQVSQMHWGGGTPTYLNKKQITHLMNLLRDNFDFLPGAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQRLDILQHTISFL 279

Query: 244 SAHG 247
           +  G
Sbjct: 280 TESG 283


>gi|262039680|ref|ZP_06012969.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           goodfellowii F0264]
 gi|261746297|gb|EEY33847.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           goodfellowii F0264]
          Length = 481

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 143/284 (50%), Gaps = 16/284 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG--PRSISS 73
           ++G+Y+   +C  KC YC F +++ + K  +  + + +S L E++ +  LT      IS+
Sbjct: 151 TIGIYIGIAYCPTKCTYCSFPAYLLKGKYAERYDEYYESLLKEIKEIGTLTKNLDLKIST 210

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++  + I  +LD +  ++ + +  E T EA    ++     +  +K+GVN+
Sbjct: 211 IYIGGGTPSILSAKEIETLLDTVKSSFELGNLKEFTFEAGRIDTLNEKKLEIIKKSGVNK 270

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+  QS  E++L+ + R HN  +  +   +A+ I   ++ DLI  LP +T       L 
Sbjct: 271 ISINPQSFNERTLKLVNRYHNRKQFDSIYDIAKRIGLEINMDLILGLPGETTEDILYTLD 330

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               Y  ++L+++ L I+  +   + +   ++ L  E +   L  +T+S    +  + Y 
Sbjct: 331 EVKKYNPENLTVHNLAIKNASKLNEENYRHEIELDYEKIFEKLDKITES-KKLYPYYMYR 389

Query: 253 ISN---------HSFLGAESLHNLNYWRYGDY-IGIGPGAHSRV 286
             N         +S  GAES++N+         IGIG GA +++
Sbjct: 390 QKNSFQWGENLGYSVDGAESVYNIEMIEENKMIIGIGAGAITKL 433


>gi|317050143|ref|YP_004117791.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
 gi|316951760|gb|ADU71235.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
          Length = 457

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 8/232 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC + C +C  N  V R     + ++     E++    L   RS++ + +GG
Sbjct: 53  LSLYVHIPFCHRLCYFCGCNKIVTRQLHKADRYLDVLEQEIRQRAPLFAGRSVTQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q ++ ++  +  ++T + +VE++IE +P  +E+      R  G NR+S+GVQ
Sbjct: 113 GTPTFLNQQQVSRLVGLLRSHFTFAEDVEMSIEVDPREIELEMIDHLRSQGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +     + R  + +   A +  AR   F  +S DLIY LP QT   +   LQR ++ 
Sbjct: 173 DFNKAVQEKVNRVQDEAMIFALVQRAREQGFRSVSLDLIYGLPLQTPESFAFTLQRVIAL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAVDLYNLTQSITSAHG 247
             D LS++       TLF    K  D  LP  ++ +A+    L Q+I +  G
Sbjct: 233 NPDRLSVFNYA-HLPTLFAAQRKIKDAELPGATQKLAI----LQQTIATLTG 279


>gi|168700714|ref|ZP_02732991.1| coproporphyrinogen III oxidase [Gemmata obscuriglobus UQM 2246]
          Length = 456

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 182/407 (44%), Gaps = 54/407 (13%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFF 76
           LG+Y+H PFC K+C +C F  +  +       ++ +   E++ + +    G R +  ++F
Sbjct: 49  LGLYLHIPFCRKRCKFCYFRVYTDKNASDISVYLNAITKEVELLSKTGCVGGRPLDYVYF 108

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +    +  ++  +       S  E+T E  P +++ +  +  R  G+ R+SLG
Sbjct: 109 GGGTPSYLSASQLDGLMSRLRAIMPWDSAREVTFECEPGTLQKHKLETLRTHGITRLSLG 168

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           V++ + + L++ GR H+  E   A   AR + FP+++ DLI  +  +    W+  + + L
Sbjct: 169 VENFKPEILQYNGRAHSEDEIYRAFGWARELGFPQINIDLIAGMVGEDWDNWKRCVAKLL 228

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH--KDG------DLVLPSENVAVDLYNL----TQSIT 243
               D +++YQ+ +   T F K    KDG      DL+ P+E       N+    T+   
Sbjct: 229 ELQPDCVTIYQMELPYNTEFSKALRVKDGAARTSLDLIQPAEGTVSPAGNVADWPTKRAW 288

Query: 244 SAHGL-----HAYEIS----------NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           + +       + YE+S          N  F+  E+L     WR  D  G G  +   V  
Sbjct: 289 TKYAFDELVKNGYEVSSATTVVKSKANTKFVYREAL-----WRGADMFGTGVASFGHVN- 342

Query: 289 GSHRVAISIEKHPESWLKMVRK--NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           G H       ++ ++W   V K   G   + + F ++E+   + L+  + L       D 
Sbjct: 343 GVHM------QNLDTWEAYVGKLEAGELPLGRAFPTTER---DRLIREVVLLLKTGHLDV 393

Query: 347 EMLAGR-NLDIECE-----RNLQRQGFIERVQFSRLRCTQRGMTMLD 387
           +   G+  +DI  E       L R+G++ +V    + CT  G+  +D
Sbjct: 394 DYFRGKYGVDIRTEFREPLAKLDREGWL-KVTGEGVDCTPEGLIQID 439


>gi|268592301|ref|ZP_06126522.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rettgeri DSM 1131]
 gi|291312082|gb|EFE52535.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rettgeri DSM 1131]
          Length = 457

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 7/253 (2%)

Query: 1   MKYLSAYENNMTGQGSN-----SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           +++   Y+ N   Q +       L +YVH PFC K C +C  N  V R K   + +++  
Sbjct: 30  LEFNQDYDENAFVQATQRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLKVI 89

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             E+     L   R ++ + +GGGTP+ ++   ++ ++  + K++  + +VE++IE +P 
Sbjct: 90  EKEIIQRAALLKGRIVTQMHWGGGTPTYLDKAQVSHLVGLLKKHFHFADDVEMSIEVDPR 149

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
            +E++     R  G NR+S+GVQ   ++    + R  +     A I  A+   F   S D
Sbjct: 150 EIELDMIDHLRHEGFNRLSMGVQDFNKEVQVLVNREQDEEFIFALIKRAKETGFTSTSID 209

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           LIY LPKQT   +   L++    + D LS++        LF    K  D  LPS    +D
Sbjct: 210 LIYGLPKQTPESFAFTLKKVAELSPDRLSVFNYA-HLPNLFAAQRKIKDADLPSAEQKLD 268

Query: 235 LYNLTQSITSAHG 247
           +   T +  +  G
Sbjct: 269 ILQDTIATLTRDG 281


>gi|209693845|ref|YP_002261773.1| coproporphyrinogen III oxidase [Aliivibrio salmonicida LFI1238]
 gi|208007796|emb|CAQ77918.1| oxygen-independent coproporphyrinogen III oxidase [Aliivibrio
           salmonicida LFI1238]
          Length = 457

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 5/244 (2%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++   T      L +Y+H PFC K C +C  N  + R+    + ++ S   E++    
Sbjct: 39  AEFDMACTQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + FGGGTP+ +       +++ +   +   +  EI+IE +P  +E++    
Sbjct: 99  LFTDRKVTQLHFGGGTPTFLTKIQFTRLMNLLRGEFHFEAGAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R+ +    I+ +  A+ + F   + DLIY LPKQ+
Sbjct: 159 LRDEGFNRLSIGVQDFNKEVQLLVNRDQDEDFIISMVQRAKELGFRSTNLDLIYGLPKQS 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQS 241
                + ++R L      LS++       TLF      KD DL  P+E + + L +  ++
Sbjct: 219 AESLAITIKRVLEMEPGRLSVFNYA-HMPTLFAAQRKIKDADLPAPAEKLVM-LQDTIET 276

Query: 242 ITSA 245
           +T A
Sbjct: 277 LTGA 280


>gi|293393654|ref|ZP_06637964.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera DSM 4582]
 gi|291423989|gb|EFE97208.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera DSM 4582]
          Length = 457

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 4/241 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC K C +C  N  V R     ++++ +   E+     
Sbjct: 39  AAFQRAAARYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQTHKADDYLVALAREIAARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ ++   I+ ++  + +N+    + E++IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLDKAQISRLVAMLRQNFDFLPDAEMSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   R + R  +     A I  A+ + F   + DLIY LP+QT
Sbjct: 159 LRHEGFNRLSMGVQDFNKDVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPRQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L R      D LS++        LF    K  D  LP     +D+  L Q+I 
Sbjct: 219 PESFAFTLARVAELNPDRLSVFNYA-HLPDLFAAQRKIKDADLPDAQQKLDI--LQQTIA 275

Query: 244 S 244
           S
Sbjct: 276 S 276


>gi|297616959|ref|YP_003702118.1| coproporphyrinogen dehydrogenase [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144796|gb|ADI01553.1| Coproporphyrinogen dehydrogenase [Syntrophothermus lipocalidus DSM
           12680]
          Length = 496

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 142/290 (48%), Gaps = 21/290 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SI 71
            S  L VYV  PFC  +C YC F  + V  Y      F+++   E++   Q+T      +
Sbjct: 169 ASRYLSVYVGIPFCPSRCHYCSFLGATVTDYSRQVTPFMEALGREVEVFGQVTKDLGFKV 228

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGV 130
            SI+ GGGTP+++   ++ ++L+ + + +  ++  EIT+EA  P ++     +  R+AGV
Sbjct: 229 QSIYVGGGTPTVLACNDLEVLLEWLNRYFVSAATREITVEAGRPDTLTAEKLRLLREAGV 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEM 189
            RIS+  Q++ + +LR +GR+H+  E + A  LAR+   R ++ DLI  LP + M ++  
Sbjct: 289 TRISINPQTMNDATLRAIGRSHSVEEVVRAFELARHEGLRQINMDLIVGLPGEGMKEYTN 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              R L    ++++++ L +++G++  +  +        E V   +      +T   G  
Sbjct: 349 TADRILQLKPENVTVHVLAVKRGSVLAETERGVGAREQIEQVERGIEMFRNRLTGT-GYE 407

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDY--------------IGIGPGAHSR 285
            Y +    ++ A ++ NL Y   G Y              +G+G G  S+
Sbjct: 408 PYYLYRQRYMAA-NMENLGYSLPGCYCLYNILMIEERQTILGLGAGTASK 456


>gi|261250083|ref|ZP_05942660.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           orientalis CIP 102891]
 gi|260939587|gb|EEX95572.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           orientalis CIP 102891]
          Length = 462

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 ALLQGRKVTQLHFGGGTPTFLTKAQISRVMAILRGEFYFEGDAEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    +A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVARAKELGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL +  E +A+    L  
Sbjct: 223 TKDSFAETLKQVLEMKPGRLSVFNYA-HMPQLFAAQRKIKDEDLPIAEEKMAI----LQD 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +I +  G      +++ F+G +
Sbjct: 278 TIATLTG------ADYQFIGMD 293


>gi|224438267|ref|ZP_03659194.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313144705|ref|ZP_07806898.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           cinaedi CCUG 18818]
 gi|313129736|gb|EFR47353.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           cinaedi CCUG 18818]
          Length = 191

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 9/194 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTG-PRSISSIFFG 77
           +Y+H PFC  KC YC FNS V R     E  I++++  ++      L G  +SI+SIFFG
Sbjct: 3   LYIHIPFCSSKCGYCAFNSFVDR-----EGEIEAYVRALREDIHHSLRGNTQSITSIFFG 57

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +    I + I  N  V+ + EI++E N + + +   +     G NR+S+G+
Sbjct: 58  GGTPNFLDSKYYEKIFESIYTNANVARDCEISLECNVNLLNLAWCKDLLSLGANRLSIGI 117

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L FL R H A +    +  A ++ F  +S D+I   P  +    E ++   L 
Sbjct: 118 QSFNENKLAFLQREHKAKDIALNVEYAFSVGFKNLSCDIITNTPLDSKKVVEADITNTLK 177

Query: 197 YAVDHLSLYQLTIE 210
             + H+S+Y L+I+
Sbjct: 178 LPISHISIYGLSID 191


>gi|260775071|ref|ZP_05883970.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608988|gb|EEX35148.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 462

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E+    
Sbjct: 43  IADYDMACTEYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLEQEILTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ +++ +   ++  +  EI+IE +P  +E++   
Sbjct: 103 SLLQGRKVTQLHFGGGTPTFLTKAQISRLMNILRAEFSFEAESEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLREEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVERAKKLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T  ++   L + L      LS++        LF      KD DL    E +A+ L +   
Sbjct: 223 TQARFAETLAQVLEMQPGRLSIFNYA-HMPQLFAAQRKIKDEDLPQAEEKMAI-LQDTIA 280

Query: 241 SITSA 245
           ++T+A
Sbjct: 281 TLTNA 285


>gi|261884945|ref|ZP_06008984.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 188

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 9/192 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC  KCPYC F SH  ++ + +  F  S L        L   + IS+IF GG
Sbjct: 1   MQIYIHIPFCESKCPYCAFGSHSDKFSLTKRYF--SALKSEIKESILNLNKKISTIFIGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +E    + I + I     ++ N EIT EANP+S  +      R+ GVNR+S G Q
Sbjct: 59  GTPSSVEAGFYSDIFEIIKPK--LAKNCEITTEANPNSASLKWLLEMRELGVNRVSFGAQ 116

Query: 139 SLEEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S  E+ L+ LGR H+    S+A+    +A+  F  ++ DL+Y     T      E++   
Sbjct: 117 SFNEKKLKLLGRIHSKNGISKAVQNAKIAK--FNNINIDLMYGTKLDTKKLILTEVENIF 174

Query: 196 SYAVDHLSLYQL 207
           +  + H+S Y L
Sbjct: 175 NKNISHVSAYSL 186


>gi|271502635|ref|YP_003335661.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
 gi|270346190|gb|ACZ78955.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
          Length = 457

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 3/243 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +Y+H PFC + C +C  N  V R     + ++     E+     
Sbjct: 39  AAFTEAVVRYPHRPLSLYLHIPFCYRLCYFCGCNKLVTRQLHKADEYLDRLALEIHQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ +    I+ ++  + +++  S + E+++E +P  +E++    
Sbjct: 99  LFANRTVTQMHWGGGTPTFLNKAQISRLMSLLRQHFHFSEHAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSI 242
              +   LQR      D LS++       +LF    K  +  LP +E     L    QS+
Sbjct: 219 PDSFAFTLQRVAELRPDRLSVFNYA-HLPSLFAAQRKIKEADLPDAEQKLAILQQTIQSL 277

Query: 243 TSA 245
           T+A
Sbjct: 278 TAA 280


>gi|167855128|ref|ZP_02477900.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parasuis 29755]
 gi|167853763|gb|EDS25005.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parasuis 29755]
          Length = 455

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH PFC K C +C  N  + R++   + ++     E+++   L   R+++ I 
Sbjct: 48  NKPLSLYVHIPFCHKLCYFCACNKIITRHQHKVDIYLDYLEKEIKYRADLFKDRTVTQIH 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ ++ +    ++  + K++ V  + EI+IE +P  +E+      R+ G NRIS+
Sbjct: 108 WGGGTPTYLDEEQSLRLMAMLRKHFNVIDDAEISIEMDPREIELEMLDHLREIGFNRISM 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q   ++  + + R  +     + +  AR + F   + DLIY LPKQT+  +   L R 
Sbjct: 168 GIQDFNKEVQKLVNREQDEEFIFSLMKRARELGFTSTNIDLIYGLPKQTVESFMFTLDRV 227

Query: 195 LSYAVDHLSLY 205
           +    D +S++
Sbjct: 228 IELNPDRMSVF 238


>gi|291165705|gb|EFE27753.1| oxygen-independent coproporphyrinogen III oxidase [Filifactor
           alocis ATCC 35896]
          Length = 417

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 11/208 (5%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFC---VKKCPYCDFNSHVRRYKVGQENFIQSFLT 57
            ++ + Y N +  Q +  LG+YVH PFC    K CPYC    H  +       ++   L 
Sbjct: 19  FEFKNEYSNTLEYQDTKQLGLYVHIPFCKSICKFCPYCKEVYHTEK----MNRYMDYLLK 74

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E+  + Q    + +SS++FGGGTP+L     +  ++D +  ++ ++    I IE +PS+V
Sbjct: 75  EIALVTQGQVKKEVSSLYFGGGTPAL-AIDRLGEVIDSLTSHFEITQG--IGIELHPSNV 131

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
                Q     GV +IS+G+QS +++ L  LGR  N  E +    L +  F  ++ D I+
Sbjct: 132 TEKLLQKLSDIGVTKISIGIQSFQDKFLGILGRKENRFETMFDA-LQKVSFETVAMDFIF 190

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
           ALP QT    + +++ A S   +H+++Y
Sbjct: 191 ALPNQTFQDLQKDIEVAFSNGANHIAIY 218


>gi|28211803|ref|NP_782747.1| coproporphyrinogen III oxidase [Clostridium tetani E88]
 gi|28204245|gb|AAO36684.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 477

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 119/220 (54%), Gaps = 7/220 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E     +    + +Y+  PFC  +C YC F S+ + + K   E +I+    E++ +++  
Sbjct: 143 EETFVNKSDKFISIYIGMPFCPTRCLYCSFTSNPIGKNKKLVEEYIKCLSFEIEEIKKYI 202

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +  +I +++FGGGTP+ ++      I++ I  N+  + NV E T+E   P S+    F
Sbjct: 203 DKKDLTIETVYFGGGTPTSVDNHEFEYIMEKIYNNFICNRNVKEFTVECGRPDSINKEKF 262

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  +K    RIS+  QS+   +L+ +GR+H   + I + + AR + F  ++ D+I  LP 
Sbjct: 263 KTMKKYDTTRISINPQSMNNDTLKVIGRSHTVEDVIRSFNEARELGFYNINMDIIVGLPG 322

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKG-TLFYKMHK 220
           + ++  E   ++ L    D L+++ ++I++G TL++++ K
Sbjct: 323 EGLSHIENTYKKILKLKPDSLTVHGMSIKRGSTLYHRLEK 362


>gi|261492500|ref|ZP_05989054.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261311863|gb|EEY13012.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 455

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   E ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRLVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  +  N+ VS + EI+IE +P  +E++     R  G NR+S+G+Q
Sbjct: 111 GTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAIGFNRLSMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             +++  R + R  +     A +  A+ + F   + DLIY LPKQ +  +   LQR +  
Sbjct: 171 DFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVESFMYTLQRVVEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|154482687|ref|ZP_02025135.1| hypothetical protein EUBVEN_00363 [Eubacterium ventriosum ATCC
           27560]
 gi|149736463|gb|EDM52349.1| hypothetical protein EUBVEN_00363 [Eubacterium ventriosum ATCC
           27560]
          Length = 493

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 143/284 (50%), Gaps = 22/284 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F S+ +  YK   ++++ S + E++++ +    R +++++ GGG
Sbjct: 174 LYVGIPFCPTTCLYCSFTSYPISMYKDKVDSYVDSVIKEIKFLGEQLKGRELNTVYIGGG 233

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +EP  +  ++  + +N+  S+  E T+EA  P S+     +  +K  V+RIS+  Q
Sbjct: 234 TPTTLEPDQMDRLITSLKENFDFSTVREFTVEAGRPDSITEEKLKTLKKHNVSRISINPQ 293

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK--QTMTQWEMELQRAL 195
           ++ +++L  +GR H   +   A  LAR   F  ++ D I  LP+  + M ++ ME  + L
Sbjct: 294 TMNQETLDIIGRRHTVEQIKEAFKLARQCGFNNINMDFILGLPQEDEKMVRYSMEEAKKL 353

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY---- 251
           S   + ++++ L +++      M KD    +  EN + +L  +T+  +    +  Y    
Sbjct: 354 S--PEGITVHSLALKRAARLNIM-KDKYSDMHMEN-SSELMKVTEKYSEEMNMKPYYLYR 409

Query: 252 --------EISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSRV 286
                   E   +S  G E L+N L    + D   +G GA +++
Sbjct: 410 QKNMAGNQENVGYSIEGCEGLYNILMMGDFQDVWAVGAGAVTKL 453


>gi|323693059|ref|ZP_08107279.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           symbiosum WAL-14673]
 gi|323502940|gb|EGB18782.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           symbiosum WAL-14673]
          Length = 485

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 128/256 (50%), Gaps = 6/256 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC   C YC F S  + +++   + ++ +   EM ++ +    R + +++FGGG
Sbjct: 169 LYIGIPFCPTTCLYCSFTSFPIGKWEGKTKLYLDALFREMDYVAEKMKGRPLDTVYFGGG 228

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ + P ++  +L  +   +      E T+EA  P S+     +  RK G+ RIS+  Q
Sbjct: 229 TPTSLNPGDLDALLCKVEAAFLTDKVREFTVEAGRPDSITQEKLEVLRKHGITRISINPQ 288

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR H   +     HLAR + F  ++ DLI  LP++T+   +  ++   + 
Sbjct: 289 TMNQKTLDLIGRRHTVEDVREKFHLARGLGFDNINMDLIVGLPEETLCDVKNTMEEIKAL 348

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D ++++ L I++      M K+    L  EN   ++ ++T   T   G++ Y +    
Sbjct: 349 APDSVTVHSLAIKRAARL-NMFKERYGNLKIENTQ-EMIDMTARYTEEMGMNPYYLYRQK 406

Query: 258 FLGAESLHNLNYWRYG 273
            + A +  N+ Y   G
Sbjct: 407 NM-AGNFENVGYAAPG 421


>gi|166031160|ref|ZP_02233989.1| hypothetical protein DORFOR_00846 [Dorea formicigenerans ATCC
           27755]
 gi|166029007|gb|EDR47764.1| hypothetical protein DORFOR_00846 [Dorea formicigenerans ATCC
           27755]
          Length = 490

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 112/209 (53%), Gaps = 3/209 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +YV  PFC   C YC F+S  +  ++   E+++ + + E++ + +++  R   +I+
Sbjct: 157 NGYSLYVGIPFCPTVCSYCSFSSGALGDWEHRVEDYLAALMKELEAIAKISEGRKADTIY 216

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +    +  +L  I +++     +E T+EA  P S+     Q  R  G+NRIS
Sbjct: 217 MGGGTPTTLNADQLDRLLTCIDRHFVREGLLEFTVEAGRPDSITKEKLQVLRNHGINRIS 276

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+++++L  +GR H   +   A H+AR + F  ++ D+I  LP +T    E  L++
Sbjct: 277 INPQSMQQKTLDTIGRKHTVEQVYEAFHMARKLGFDNINMDIIAGLPGETPEDMEDTLRQ 336

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                 D+L+++ L I++     +  ++G
Sbjct: 337 IALLGPDNLTVHSLAIKRAAKMGQEEREG 365


>gi|217975434|ref|YP_002360185.1| coproporphyrinogen III oxidase [Shewanella baltica OS223]
 gi|217500569|gb|ACK48762.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS223]
          Length = 446

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 87  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 207 TPETFAVTMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 263

Query: 243 TSAHG 247
            +  G
Sbjct: 264 ETLTG 268


>gi|152978066|ref|YP_001343695.1| coproporphyrinogen III oxidase [Actinobacillus succinogenes 130Z]
 gi|150839789|gb|ABR73760.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           succinogenes 130Z]
          Length = 455

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 116/229 (50%), Gaps = 3/229 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E+     L   R+ + I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDFLEKEITNRAPLFKNRTATQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +     A ++D +  N+ ++ N EI+IE +P  +E++  +  R  G NRIS+GVQ
Sbjct: 111 GTPTYLSEAQSARLMDMLKSNFNIAENAEISIEMDPREIELSMLEHLRNIGFNRISMGVQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  AR + F   + DLIY LP QT+  +   LQ+ +  
Sbjct: 171 DFNKEVQKAVNREQDEDFIRALLVRARELGFQSTNLDLIYGLPFQTVESFMFTLQKVIEL 230

Query: 198 AVDHLSLYQLTIEKGTLFYKMH-KDGDLVLPSENVAVDLYNLTQSITSA 245
             D LS++           ++  KD DL  P   +++ L N  +++ +A
Sbjct: 231 NPDRLSVFNYAHLPSRFAGQVKIKDKDLPSPETKLSI-LQNTIETLAAA 278


>gi|126172303|ref|YP_001048452.1| coproporphyrinogen III oxidase [Shewanella baltica OS155]
 gi|153002847|ref|YP_001368528.1| coproporphyrinogen III oxidase [Shewanella baltica OS185]
 gi|160877594|ref|YP_001556910.1| coproporphyrinogen III oxidase [Shewanella baltica OS195]
 gi|125995508|gb|ABN59583.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS155]
 gi|151367465|gb|ABS10465.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS185]
 gi|160863116|gb|ABX51650.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS195]
          Length = 446

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 87  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 207 TPETFAVTMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 263

Query: 243 TSAHG 247
            +  G
Sbjct: 264 ETLTG 268


>gi|257465442|ref|ZP_05629813.1| coproporphyrinogen III oxidase [Actinobacillus minor 202]
 gi|257451102|gb|EEV25145.1| coproporphyrinogen III oxidase [Actinobacillus minor 202]
          Length = 455

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 101/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  + R++   E ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYIHIPFCHKLCYFCACNKVITRHRHKVEIYLDYLEKEIRTRAPLFKQRKVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A +++ +  N+ V+ + EI+IE +P  +E++     R+ G NRIS+G+Q
Sbjct: 111 GTPTYLDEDQSARLMEMLKSNFNVAEDAEISIEMDPREIELDMLDHLRQIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQQLVNREQDEDFIFALMKRAKELGFVSTNVDLIYGLPKQNVESFMYTLERVVEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|207744770|ref|YP_002261162.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum IPO1609]
 gi|206596180|emb|CAQ63107.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum IPO1609]
          Length = 489

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I++   EM  + +  GP R  + + +G
Sbjct: 76  LSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMAMIARHIGPLRQATQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    K++ ++S+ EI++E +P     +        G NR SLG+
Sbjct: 136 GGTPTFLSHDEMRDVMAATRKHFALTSDAEISVELDPRHAGDDTLAVLADLGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R  +  +    +  AR + F  +SFDLIY LP Q +  +   L R L 
Sbjct: 196 QDFDADVQHAIHRVQSVEQTRHVVDSARRLGFQSISFDLIYGLPHQHIDTFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A D LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKPQRRIDVLALPSADEKLDLLAMT 297


>gi|207722199|ref|YP_002252636.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum MolK2]
 gi|206587374|emb|CAQ17957.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum MolK2]
          Length = 491

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I++   EM  + +  GP R  + + +G
Sbjct: 76  LSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMAMIARHIGPLRQATQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    K++ ++S+ EI++E +P     +        G NR SLG+
Sbjct: 136 GGTPTFLSHDEMRDVMAATRKHFALTSDAEISVELDPRHAGDDTLAVLADLGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R  +  +    +  AR + F  +SFDLIY LP Q +  +   L R L 
Sbjct: 196 QDFDADVQHAIHRVQSVEQTRHVVDSARRLGFQSISFDLIYGLPHQHIDTFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A D LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKPQRRIDVLALPSADEKLDLLAMT 297


>gi|89074470|ref|ZP_01160947.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
 gi|89049758|gb|EAR55308.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
          Length = 457

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 5/231 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFC K C YC  N  + R++   ++++     E++    L G R +S + +G
Sbjct: 52  KLSLYIHIPFCHKLCYYCGCNKIITRHQHKADDYLDKLEQEIKQRATLLGDRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I+ +++ +   +    + EI+IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLTAAQISRLMNSLRAVFNFDDDAEISIEVDPREIELDILDHLRSEGFNRLSIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +   + + R  +     A +  AR + F   + DLIY LP Q    +   L++ L 
Sbjct: 172 QDFNKDVQKLVNREQDEVFIFAMVERARELGFRSTNLDLIYGLPLQNREMFAKTLEQVLE 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAVDLYNLTQSITSA 245
                LS++        LF    K  + +LPS  E + + L N   ++T A
Sbjct: 232 MNPGRLSVFNYA-HMPKLFAAQRKISEALLPSAKEKLGI-LQNTIATLTGA 280


>gi|221130431|ref|XP_002155084.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 153

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 3/130 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N      S S  +Y+HWP+C + CPYC+FN +VR   +  E  I+  L E Q M ++   
Sbjct: 20  NKRNAHESKSATLYIHWPYCKQLCPYCNFNKYVRD-NIDNELMIKCLLIEFQSMCRMYDV 78

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + I S++FGGGTPSL  P+ I  +L+ + K   V  N EI++E NP+S E      ++ A
Sbjct: 79  KKIKSVYFGGGTPSLAPPKLINRLLEEVCKYTNV--NCEISMEVNPTSTEKKKLSDFKSA 136

Query: 129 GVNRISLGVQ 138
           G++R+S+GVQ
Sbjct: 137 GISRVSIGVQ 146


>gi|300856531|ref|YP_003781515.1| hypothetical protein CLJU_c33680 [Clostridium ljungdahlii DSM
           13528]
 gi|300436646|gb|ADK16413.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 476

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 145/298 (48%), Gaps = 25/298 (8%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E N+    S ++ VYV  PFC  KC YC F S+ ++  K   E +++S   E++ M +  
Sbjct: 139 EKNLVNSNSRNISVYVGMPFCPTKCLYCSFASNPIKGCKELVEPYLKSLTYEIKKMSEYI 198

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
                +I  I+FGGGTP+ I+ +    ++  I  ++     + E  +E   P S+  N  
Sbjct: 199 KQHELNIECIYFGGGTPTSIDNEKFEKLMHEIYNSFVRDYKIKEFDVECGRPDSITSNKL 258

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++ GVNRIS+  Q++ + +L+F+GRNH+ +E     H+AR   F  ++ DLI  LP 
Sbjct: 259 ETMKRYGVNRISINPQTMNDSTLKFIGRNHSVNEVREKFHMARKYGFDNINMDLIVGLPG 318

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           + + +             D+L+++ +++++ +  Y            EN+   + N++ S
Sbjct: 319 EGIEEVNKTCDEIEKLGPDNLTVHGMSVKRASRLY------------ENI---VNNISYS 363

Query: 242 ITSAHGLH-AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           I     L+  YE    + L A+S++   Y+ Y     +G   +     G HR   ++E
Sbjct: 364 IAGHEELNLMYE---RTALLAKSMNMKPYYMYRQKNMVGNMENIGYTSGKHRGLYNVE 418


>gi|260891520|ref|ZP_05902783.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           hofstadii F0254]
 gi|260858903|gb|EEX73403.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           hofstadii F0254]
          Length = 507

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 22/287 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPR--SISS 73
           ++G+Y+   FC  KC YC F +++ R K  +  + +I S   E+  + QLT      I++
Sbjct: 180 TIGIYIGIAFCPTKCSYCSFPAYLLRGKYAERYDEYIGSIYHEISEIGQLTQELGLKINT 239

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++  + I  +L  + +N+ +    E T EA    +++       +  G+N+
Sbjct: 240 IYIGGGTPSILTAKEIDKLLKTVKENYNLDYLKEFTFEAGRIDTLDEEKLAIIKSYGINK 299

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+  QS  E++L+ + R H+  +      LA+N+   ++ DLI  LP++T       + 
Sbjct: 300 ISINPQSFNEKTLKLVNRYHDREQFDNVYKLAKNLGLEINMDLILGLPRETTEDILYTMD 359

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
               Y +++L+++ L I+  +   K +   + VL  E +    Y   +++T   GL  Y 
Sbjct: 360 EISKYDMENLTIHNLAIKNASRLNKENYAHEDVLDYEQI----YEKIENVTENKGLFPYY 415

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV 286
                      E   +S  G++S++N+         IGIG GA +++
Sbjct: 416 MYRQKNSFQWGENLGYSLNGSDSIYNIEMIEENKTIIGIGAGAITKL 462


>gi|315269792|gb|ADT96645.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS678]
          Length = 458

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 43  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 99  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 159 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 219 TPETFAVTMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 275

Query: 243 TSAHG 247
            +  G
Sbjct: 276 ETLTG 280


>gi|120596872|ref|YP_961446.1| coproporphyrinogen III oxidase [Shewanella sp. W3-18-1]
 gi|120556965|gb|ABM22892.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           W3-18-1]
          Length = 446

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 87  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFADEGEFSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 207 TPETFAATMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 263

Query: 243 TSAHG 247
            +  G
Sbjct: 264 ETLTG 268


>gi|298369284|ref|ZP_06980602.1| oxygen independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298283287|gb|EFI24774.1| oxygen independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 606

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 9/242 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y+H PFC   C +C F  N+    Y  V  +  I+    E + +RQ  G   I +++FG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNAWKESYSSVYTDKIIEEMAAEAE-IRQGNG--KIRAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++  ++A ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GV
Sbjct: 112 GGTPTALQTPDLARLIRACYQYLPIADDCEFTIEGRMSHFDIEKAQACVEAGANRISIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ +    R LGR H   EA A +     I   +  DL++ LP QT T W+ +L+RA + 
Sbjct: 172 QTFDTAIRRRLGRKHGGDEAFAYLEKLCEINAVIVVDLMFGLPNQTDTVWQNDLERATAL 231

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  L  Y   +       +M + G    P   +V  D Y       +  G +  ++SN 
Sbjct: 232 PLSGLDTYAFNLYPMLPINRMVEKGAFPAPPGFDVQADQYAYAVETLAQKGWN--QVSNS 289

Query: 257 SF 258
            F
Sbjct: 290 HF 291


>gi|126661136|ref|ZP_01732215.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
 gi|126617579|gb|EAZ88369.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
          Length = 447

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 173/366 (47%), Gaps = 25/366 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +  N+L +Y+H PFC  +C +C+  + V++ +     ++ +   + + ++Q  G    + 
Sbjct: 50  ENRNALFLYIHIPFCEMRCGFCNLFTMVQKDEDFVSQYVATLKRQSERVKQALGESKFAR 109

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGV 130
              GGGTP+ +  Q +  +LD IA+N T+ +N++    ++E +P +   +     R  G+
Sbjct: 110 FALGGGTPTRLPFQALKAVLD-IAEN-TMGANLQAIPCSVEVSPETATQDKLNLLRDRGI 167

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+GVQS  +  +  + R   A++    +   ++  FP ++ DLIY LP QT+  W  
Sbjct: 168 DRISIGVQSFVDTEVLAIQRRQEATQVKEVLTSIKDKNFPTLNIDLIYGLPGQTIDTWLY 227

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            LQ+A+++  + + LY L +   T     +K+ D      ++ ++ Y   +    A+G  
Sbjct: 228 SLQQAIAFQPEEIYLYPLYVRPLTGMDCTNKEWD------DIRLNCYRQGRDFLLANGYQ 281

Query: 250 AYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVK----VGSHRV-AISIEKHPES 303
              +         ++    Y    D  +G+G GA S  K       + V A  I+   ++
Sbjct: 282 QISMRMFQKPSNSNISAPVYCCQADGMVGLGCGARSYTKQLHYASEYAVGAKGIQSILQA 341

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE------ 357
           +L    ++   +     L +E +   ++++ L   EG+++K +  + G  L I+      
Sbjct: 342 YLDTPTESFDYINYGFTLDTEDRQRRYILISLLSNEGLNIKQYHHIFGTELLIDYPELTE 401

Query: 358 -CERNL 362
             ERNL
Sbjct: 402 LLERNL 407


>gi|238797624|ref|ZP_04641120.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           mollaretii ATCC 43969]
 gi|238718488|gb|EEQ10308.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           mollaretii ATCC 43969]
          Length = 459

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLENEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ +++ + +++      E +IE +P  +E++    
Sbjct: 101 LFAGRQVSQMHWGGGTPTYLNKTQISHLMNLLREHFDFLPGAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T    
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQRLDILQHTIRFL 279

Query: 244 SAHG 247
           +  G
Sbjct: 280 TESG 283


>gi|210616268|ref|ZP_03291018.1| hypothetical protein CLONEX_03239 [Clostridium nexile DSM 1787]
 gi|210149866|gb|EEA80875.1| hypothetical protein CLONEX_03239 [Clostridium nexile DSM 1787]
          Length = 488

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S  + ++K   + ++ +   E+ ++ +++  + ++++
Sbjct: 150 KDGYSLYVGIPFCPTTCSYCSFTSQPIHKWKDRVDEYLDALCKEITFVGEVSKEKKLNTV 209

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP+ +  +L  I K ++     E T+EA  P S+     +  R+  ++RI
Sbjct: 210 YIGGGTPTTLEPEQLERLLSHIEKTFSFEDLKEFTVEAGRPDSITKEKLEVLRRHQISRI 269

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +      +AR + F  ++ DLI  LP +T+   +  L+
Sbjct: 270 SINPQTMQQKTLDCIGRKHTVEDIRQVYAMARELGFENINMDLIAGLPGETLDDMKDTLR 329

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   +A D L+++ L +++ +   +  ++G
Sbjct: 330 QIEMFAPDSLTVHALAMKRASRLTQEKREG 359


>gi|187930548|ref|YP_001901035.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12J]
 gi|187727438|gb|ACD28603.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12J]
          Length = 494

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 3/231 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y+H PFC   C YC  N  + +       ++++   EM  +    GP R ++ + +G
Sbjct: 76  LSLYMHLPFCANLCYYCGCNKVITKDHSRSARYVETLAREMAMVANQIGPLRRVTQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ V+++ EI++E +P   +    +   + G NR SLG+
Sbjct: 136 GGTPTFLAHDEMRAVMAATREHFDVANDGEISVELDPRHADDATLEVLAEIGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  E    +  AR + F  +SFDLIY LP Q    +   L R L 
Sbjct: 196 QDFDPDVQRAVHRIQSVEETRRVVDTARRLGFESISFDLIYGLPYQRTETFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            A D LS+Y        LF    +   L LP+ +  +DL  +T     A G
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKAQRRIDMLTLPTADEKLDLLAMTVERLVAEG 305


>gi|83747414|ref|ZP_00944453.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
 gi|83725871|gb|EAP73010.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
          Length = 525

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I++   EM  + +  GP R  + + +G
Sbjct: 112 LSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMAMIARHIGPLRQATQLHWG 171

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    K++ ++S+ EI++E +P     +        G NR SLG+
Sbjct: 172 GGTPTFLSHDEMRDVMAATRKHFALTSDAEISVELDPRHAGDDTLAVLADLGFNRASLGI 231

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R  +  +    +  AR + F  +SFDLIY LP Q +  +   L R L 
Sbjct: 232 QDFDADVQHAIHRVQSVEQTRHVVDSARRLGFQSISFDLIYGLPHQHIDTFNATLDRVLE 291

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A D LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 292 MAPDRLSVYSYA-HLPHLFKPQRRIDVLALPSADEKLDLLAMT 333


>gi|119773228|ref|YP_925968.1| coproporphyrinogen III oxidase [Shewanella amazonensis SB2B]
 gi|119765728|gb|ABL98298.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           amazonensis SB2B]
          Length = 446

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 119/244 (48%), Gaps = 7/244 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LSA E++     S+ L +Y+H PFC K C YC  N  + R+    + +I+   +E+    
Sbjct: 31  LSAIEHS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLASEILNRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    +++ + +GGGTP+ + P+ I  +   +  N+  +   E +IE +P  +E+    
Sbjct: 87  PLFKGYTVTQMHWGGGTPTFLSPEQILRLTKLLKDNFNFADEGEFSIEVDPREIELTMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   +Q    + R  +       I  A+ + F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKQVQEAVNRPQDEQFIFDLIGKAKAMGFESTNVDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           T   +   +QR L  + D LS++    +       +  KD DL  P + + + L+   ++
Sbjct: 207 TPETFAETIQRILDLSPDRLSVFNYAHLPARFAAQRKIKDEDLPSPQQKLEI-LHQTIET 265

Query: 242 ITSA 245
           +  A
Sbjct: 266 LVDA 269


>gi|227537949|ref|ZP_03967998.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227242188|gb|EEI92203.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 454

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 32/328 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N + +Y+H PFC   C YC  N+ + +    ++ +I + L E    +Q+ G  +  IS 
Sbjct: 52  ANGVSIYIHLPFCEDLCTYCGCNTRITKNHKVEDPYITAVLKEWAMYKQILGDTAVKISE 111

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+  +P N+  ++ GI    T + +   + EA+P++   ++ +     G  R+
Sbjct: 112 IHLGGGTPTFFQPANLERLITGILDGNTCAEDASFSFEAHPANTTDSHLETLYNLGFRRL 171

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+Q  + +    + R     +    +  AR I +  ++FDLIY LP QT +     + 
Sbjct: 172 SLGIQDFDAKVQFVINRLQTVEDVERVVAQARAIGYTSINFDLIYGLPFQTESTITETID 231

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           +AL    D +S Y       I+ G       +  ++ LP     + LY L + +    G 
Sbjct: 232 KALEMRPDRISFYSYAHVPWIKPG-----QRRFTEMDLPEGENKLSLYKLGKQMIGQEGY 286

Query: 249 ------HAYEISNHSFLGAES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAI 295
                 H     +  FL + +  LH  N+  Y D      IG+G  + S    G  +   
Sbjct: 287 EDVGMDHFARPDDELFLASRAGRLHR-NFMGYADRYTPLMIGLGVSSISDAWTGFAQNVK 345

Query: 296 SIEKH----PESWLKMVRKNGHAVVEKE 319
           ++E++     E  L +V+  GH + E++
Sbjct: 346 TVEEYHRLITEGKLPVVK--GHLLTEED 371


>gi|226327582|ref|ZP_03803100.1| hypothetical protein PROPEN_01453 [Proteus penneri ATCC 35198]
 gi|225204108|gb|EEG86462.1| hypothetical protein PROPEN_01453 [Proteus penneri ATCC 35198]
          Length = 458

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  + R+K   + ++     E+    +    R ++ + +GG
Sbjct: 53  LSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRARYFKDRKVTQMHWGG 112

Query: 79  G-TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           G TP+ ++ Q I+ ++  + +++    N E++IE +P  +E++     R  G NR+S+GV
Sbjct: 113 GGTPTFLDKQQISRLVSLLRQHFDFVDNAELSIEIDPREIELDVIDHLRNEGFNRLSMGV 172

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R  + +   A +  AR + F   S DLIY LPKQT   +   L+R + 
Sbjct: 173 QDFNKEVQQKVNREQDEAFIFALVERAREVGFHSTSIDLIYGLPKQTKESFAFTLKRVIE 232

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            + D LS++        LF    K  D  LP     +++   T S  + +G
Sbjct: 233 LSPDRLSVFNYA-HLPNLFAAQRKIKDEDLPLAEEKLEILQETISTLTTNG 282


>gi|113972238|ref|YP_736031.1| coproporphyrinogen III oxidase [Shewanella sp. MR-4]
 gi|113886922|gb|ABI40974.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           MR-4]
          Length = 446

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 4/233 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+     L    +++ + 
Sbjct: 39  SDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRAPLFKHYTVTQMH 98

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  + D I  N+  ++  E +IE +P  +E++     ++AG NRIS+
Sbjct: 99  WGGGTPTFLNPEQILKLTDLIKANFNFAAEGEFSIEVDPREIELSMLDTLKEAGFNRISI 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 159 GVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQTPETFAATMQRV 218

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L  + D LS++         F    K  D  LPS    +++  L Q+I +  G
Sbjct: 219 LDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTIETLTG 268


>gi|212711633|ref|ZP_03319761.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
           30120]
 gi|212685735|gb|EEB45263.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
           30120]
          Length = 457

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R K   + +++    E+     L   R+++ + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLEVIEKEIIQRAALLKNRTVTQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   ++ ++  + K +  + + E++IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLDKAQVSHLVGLLKKYFHFAPDAEMSIEVDPREIELDMIDHLRSEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++    + R  +     A I  A+   F   S DLIY LPKQT   +   L++    
Sbjct: 173 DFNKEVQVLVNREQDEEFIFALIKRAKETGFTSTSIDLIYGLPKQTPESFAFTLKKVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           A D LS++        LF    K  D  LP+    +D+   T +  ++ G
Sbjct: 233 APDRLSVFNYA-HLPNLFAAQRKIKDEDLPTAEQKLDILQDTIATLTSGG 281


>gi|299065230|emb|CBJ36396.1| Coproporphyrinogen III oxidase [Ralstonia solanacearum CMR15]
          Length = 488

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I +   EM  +    GP R  + + +G
Sbjct: 76  LSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIGALAREMAMVAGHIGPLRQATQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ ++S+ EI++E +P        +     G NR SLG+
Sbjct: 136 GGTPTFLSHDEMRDVMAATREHFALTSDAEISVELDPRHASDATLEVLASLGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  +    +  AR + F  +SFDLIY LP Q    +   L R L 
Sbjct: 196 QDFDADVQRAIHRVQSVEQTRQVVDSARRLGFESISFDLIYGLPHQHTATFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A D LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKPQRRIDALALPSADEKLDLLAMT 297


>gi|257413255|ref|ZP_04742489.2| oxygen-independent coproporphyrinogen III oxidase 2 [Roseburia
           intestinalis L1-82]
 gi|257204080|gb|EEV02365.1| oxygen-independent coproporphyrinogen III oxidase 2 [Roseburia
           intestinalis L1-82]
          Length = 511

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 136/264 (51%), Gaps = 12/264 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  +K   + ++ +   E+ +       + ++SI
Sbjct: 184 DNGYSLYIGIPFCPTTCLYCSFTSYPLVSWKNRVDAYLDALEKEIDYTAAKFYHKHLNSI 243

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +   K G+ RI
Sbjct: 244 YIGGGTPTTLEPYQLDRLIRKIKCSFDLSDCLEFTVEAGRPDSITREKLEVLHKWGITRI 303

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H+  + + +  +AR + F  ++ DLI  LP++++      L+
Sbjct: 304 SINPQTMQQRTLDLIGRRHSVEQTVESFKIARELGFDDINMDLIMGLPEESLEDVRDTLE 363

Query: 193 RALSYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           + +    D+L+++ L +++     +F + +KD  +V   E++     +LT S      L 
Sbjct: 364 QIMQLKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTQEHM-----DLTASYAKKMDLF 418

Query: 250 AYEISNHSFLGAESLHNLNYWRYG 273
            Y +     + A +L N+ Y + G
Sbjct: 419 PYYLYRQKGM-AGNLENVGYAKEG 441


>gi|157373231|ref|YP_001471831.1| coproporphyrinogen III oxidase [Shewanella sediminis HAW-EB3]
 gi|157315605|gb|ABV34703.1| Coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 446

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 22/327 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K L++ EN+     S+ L +YVH PFC K C YC  N  + R++   + +I+    E+  
Sbjct: 29  KLLTSIENS----KSDKLSLYVHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVK 84

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L     ++ I +GGGTP+ + P  I  +   I  ++ V+   E +IE +P  +E++ 
Sbjct: 85  RAPLFKNYLVTQIHWGGGTPTFLSPDQILKLSALIKSSFNVADEGEYSIEVDPREIELSM 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP
Sbjct: 145 LDTLKEAGFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMAKAKELGFVSTNIDLIYGLP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            QT   +   +QR L    D LS++    +       +  KD DL  P + + + L+   
Sbjct: 205 HQTPETFAETMQRVLDLNPDRLSVFNYAHLPARFAAQRKIKDEDLASPQQKLDM-LHQTI 263

Query: 240 QSITSAH----GLHAYEISNH--SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
           +++T A     G+  +   +   S L  E   + N+  Y      D +G+G  + S++  
Sbjct: 264 ETLTGAGYQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGD 323

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAV 315
              +    I  + ES    V K+GHA+
Sbjct: 324 CYAQNQKDIRPYYES----VDKSGHAL 346


>gi|261496914|ref|ZP_05993282.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307438|gb|EEY08773.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           OVINE]
          Length = 455

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   E ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRLVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  +  N  VS + EI+IE +P  +E++     R  G NR+S+G+Q
Sbjct: 111 GTPTYLDEDQSARLMQMLRANLDVSDDAEISIEMDPREIELSMLDHLRAIGFNRLSMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             +++  R + R  +     A +  A+ + F   + DLIY LPKQ +  +   LQR +  
Sbjct: 171 DFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVESFMYTLQRVVEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|309780456|ref|ZP_07675205.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
 gi|308920784|gb|EFP66432.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
          Length = 494

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 3/231 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y+H PFC   C YC  N  + + +     ++++   EM  +    GP R ++ + +G
Sbjct: 76  LSLYMHLPFCANLCYYCGCNKVITKDRSRSARYVETLAREMAMVASQIGPLRRVTQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ ++++ EI++E +P   +    +   + G NR SLG+
Sbjct: 136 GGTPTFLAHDEMRAVMAATREHFDLATDGEISVELDPRHADDATLEVLAEIGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  E    +  AR + F  +SFDLIY LP Q    +   L R L 
Sbjct: 196 QDFDPDVQRAVHRIQSVEETRRVVDTARRLGFESISFDLIYGLPYQRTETFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            A D LS+Y        LF    +     LP+ +  +DL  +T     A G
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKAQRRIDMFTLPTADEKLDLLAMTVERLVAEG 305


>gi|317494609|ref|ZP_07953022.1| oxygen-independent coproporphyrinogen III oxidase
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917539|gb|EFV38885.1| oxygen-independent coproporphyrinogen III oxidase
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 457

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 10/252 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +YVH PFC K C +C  N  V R     + ++     E+     +   R +S + +G
Sbjct: 52  ALSLYVHIPFCHKLCYFCGCNKIVTRQTHKADEYLDKLALEISQRAPMFAGRKVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++   I+ ++  +   +    + EI+IE +P  +E++     R+ G NR+S+GV
Sbjct: 112 GGTPTYLDKTQISRLMRMLRDAFDFLPDAEISIEVDPREIELDVLDHLRQEGFNRLSMGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R  +       I+ A+ I F   + DLIY LPKQT   +   LQ+   
Sbjct: 172 QDFNKEVQKLVNREQDEQFIFDLINRAKAIGFTSTNIDLIYGLPKQTPESFSYTLQKVAE 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D LS++        LF    K  D  LPS +  + +   T ++ +  G        +
Sbjct: 232 LNPDRLSVFNYA-HMPKLFAAQRKIKDEDLPSADSKLSILQETIAMLTDSG--------Y 282

Query: 257 SFLGAESLHNLN 268
            F+G +   + N
Sbjct: 283 QFIGMDHFAHAN 294


>gi|238755601|ref|ZP_04616938.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia ruckeri
           ATCC 29473]
 gi|238706201|gb|EEP98581.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia ruckeri
           ATCC 29473]
          Length = 457

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++     E++    L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQQATLFKGRQVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I  +++ + +N+      E +IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKTQITQLMNLLRENFDFLPGAEQSIEVDPREIELDVIDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  +     A I  A+ + F   + DLIY LPKQT   +   L+R +  
Sbjct: 173 DFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQTPESFAFTLKRVVEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++        LF    K  D  LPS    +D+   + S  +  G
Sbjct: 233 NPDRLSVFNYA-HLPALFAAQRKIKDEDLPSPEQRLDILQHSISFLTDSG 281


>gi|150016421|ref|YP_001308675.1| coproporphyrinogen III oxidase [Clostridium beijerinckii NCIMB
           8052]
 gi|149902886|gb|ABR33719.1| Coproporphyrinogen dehydrogenase [Clostridium beijerinckii NCIMB
           8052]
          Length = 475

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 140/274 (51%), Gaps = 10/274 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E  +  +  N++ +Y+   FC  KC YC F S+ +  YK     +I++ + E++ M    
Sbjct: 137 EKKIVNKDKNTIAIYIGMAFCPTKCLYCSFTSNPIGVYKKMVTPYIEALIKEIKGMSSYV 196

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             R  +I S++FGGGTP+ +  +   +I+  I   +    N+ E T+E   P ++  N  
Sbjct: 197 KERKLNIESVYFGGGTPTSVSDEEFNIIMKEIYNCFIKDDNIKEFTVECGRPDTLTRNKL 256

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q  ++ GV+RIS+  Q++ +++L  +GR H++++      +AR + F  ++ D+I  LP 
Sbjct: 257 QTMKEYGVDRISINPQTMNDKTLNLIGRTHSSADIKEKFKMARELGFDDINMDIIIGLPG 316

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVDLYNLT 239
           +T           +    D ++++ L +++G+  Y+  + K G + + S++  + +Y  +
Sbjct: 317 ETHEDVIHTKNELIKLKPDSITVHGLALKRGSRMYEEFILKKG-IQITSQDEIIKMYEES 375

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +++    G+  Y +     +   ++ NL Y + G
Sbjct: 376 RNLAENLGISPYYMYRQKNMVG-NMENLGYAKEG 408


>gi|307243814|ref|ZP_07525945.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306492817|gb|EFM64839.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 519

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 139/263 (52%), Gaps = 8/263 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISS 73
           + + +Y+  PFC  +C YC F SH + +Y   +E+++ + L E + +  +     ++I S
Sbjct: 186 DKISLYLSIPFCPTRCLYCSFPSHSLDKYGQHRESYVDTLLKEARGIESIIEDFGKTIES 245

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           I+ GGGTP+ +E +++  ++  + K   ++   E T+EA  P ++  +  +  +K GV R
Sbjct: 246 IYIGGGTPTSLEAKDMDYLITNLFKILDLTKIKEFTVEAGRPDTITRDKLKVLKKHGVTR 305

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  Q++ + SL  +GR H+  + +   H+ARN+ F  ++ DLI  LP ++    E  +
Sbjct: 306 ISINPQTMNQVSLDRIGRKHSVEDIVDCYHMARNLGFDNINMDLILGLPGESPAMVEETM 365

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++ +    + ++++ L +++ +      +D    L +    V++ +++++    +G   Y
Sbjct: 366 KKIIDLDPESVTVHTLALKRASDLNINLQDHKNDLTNYRNMVEMIDISRTYMEENGYKPY 425

Query: 252 EISNHS-FLGAESLHNLNYWRYG 273
            +      LG  +L N+ Y + G
Sbjct: 426 YMYRQKHMLG--NLENIGYAKPG 446


>gi|323493188|ref|ZP_08098318.1| coproporphyrinogen III oxidase [Vibrio brasiliensis LMG 20546]
 gi|323312535|gb|EGA65669.1| coproporphyrinogen III oxidase [Vibrio brasiliensis LMG 20546]
          Length = 462

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 ALLQGRKVTQLHFGGGTPTFLTKAQISRLMAILRGEFFFEGDAEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   L++ L      LS++        LF      KD DL +  E +A+ L +   
Sbjct: 223 TKQSFAETLKQVLEMKPGRLSVFNYA-HMPQLFAAQRKIKDEDLPVAEEKMAI-LQDTIA 280

Query: 241 SITSA 245
           ++T+A
Sbjct: 281 TLTNA 285


>gi|220928316|ref|YP_002505225.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998644|gb|ACL75245.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 443

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 137/272 (50%), Gaps = 17/272 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISS-----I 74
           +Y + PFC  +C +C + +     K+ +   +  +L  ++  +  ++  + + S     +
Sbjct: 59  LYFNIPFCASRCSFCLYYT-----KIYERELVDRYLDALEKEVEAISNTKYVKSTRFECV 113

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+  + I  + + + KN+ V+  +EI+ EANPSS+ ++     ++   NRIS
Sbjct: 114 YFGGGTPSLLNEKQIDRVANIVFKNFQVTDELEISFEANPSSLSLDKVMALKRNNFNRIS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS  ++ L+ +   HN+ EA   I++       ++ DLIY    QT  + +M+L+  
Sbjct: 174 LGIQSFNDKYLKQMNCRHNSKEAKEVINMLLEKGFNVNIDLIYGFQGQTEEELQMDLEEI 233

Query: 195 LSYA-VDHLSLYQLTIEKGT-LFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAY 251
           L++  + H+S++ L +   T L+ K+ K  +L +   +N  V  +    S    +   + 
Sbjct: 234 LNFKNLHHISIFPLRLVTQTPLYNKLEKQQELNIQAHQNKIVKYHECIDSFFKNNSYISE 293

Query: 252 EISNHSFLGAESLHNLNYWRY-GDYIGIGPGA 282
           E S H +      H   Y    G  IG G GA
Sbjct: 294 EESVHYY--KRGFHPHRYQSLDGRIIGFGSGA 323


>gi|238626064|gb|ACR48343.1| NosN [Streptomyces actuosus]
          Length = 395

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 152/350 (43%), Gaps = 24/350 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRR----YKVG---QENFIQSFLTEMQ---WMRQLT 66
           N L +YVH PFC  KC +CD+   +       K G   ++ +I +   E+     M +  
Sbjct: 4   NLLMIYVHIPFCHSKCTFCDWVQAIPTKDLLRKPGDSVRQKYISALCAEIAERGAMHRAA 63

Query: 67  GPRSISSIFF-GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           G   I  + + GGGT S ++ Q  A +++ +  ++ +S+  E TIE +P +V+      Y
Sbjct: 64  G--DIPHVLYWGGGTASSLDEQETAAVMEALHSSFDMSTVAEATIECSPDTVDERKLAFY 121

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S GVQS ++  LR LGR H A +A   +H AR   F  +S D++   P Q  
Sbjct: 122 RGLGFNRVSSGVQSFDDDRLRRLGRRHTAEQAGRIVHAARAAGFEDVSIDIMSGFPDQEA 181

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + +  + RAL   V+HLSLY      GT F +   D             L+   +    
Sbjct: 182 DELDRTVDRALELPVNHLSLYSFRPTPGT-FMRRRMDSSERRTYLRRQQALFTRARRAIE 240

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             GL  Y  +N  F       ++ +    D +G+G GA S V           + H +  
Sbjct: 241 GFGLSEY--ANGYFGKVSPFASMYFQHRADTVGLGSGAISLVDQ-------RFKSHQKGL 291

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           L     +  A         ++     L  GL + +GI  +DW    G +L
Sbjct: 292 LHSYVDDPLAFDIDVPAGQDRVLVSLLQAGLAMFDGIPREDWRQRTGTDL 341


>gi|197333954|ref|YP_002154849.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio fischeri
           MJ11]
 gi|197315444|gb|ACH64891.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio fischeri
           MJ11]
          Length = 457

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 5/244 (2%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++   T      L +Y+H PFC K C +C  N  + R+    + ++ S   E++    
Sbjct: 39  AEFDMACTQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + FGGGTP+ +       ++  +   +      EI+IE +P  +E++    
Sbjct: 99  LFTDRKVTQLHFGGGTPTFLTKVQFTRLMTLLRGEFQFEDGAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  + + R+ +    I  +  A+++ F   + DLIY LPKQ+
Sbjct: 159 LRDEGFNRLSIGVQDFNKEVQQLVNRDQDEDFIIQMVQRAKDLGFRSTNLDLIYGLPKQS 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQS 241
                  ++R L      LS++       TLF      KD DL  P+E + + L    ++
Sbjct: 219 ADSLANTIKRVLEMEPGRLSVFNYA-HMPTLFAAQRKIKDADLPAPAEKLVM-LQETIET 276

Query: 242 ITSA 245
           +T A
Sbjct: 277 LTGA 280


>gi|322514702|ref|ZP_08067729.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
 gi|322119351|gb|EFX91464.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
          Length = 455

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R+++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHQHKVDIYLDYLEKEIKTRAPLFTNRTVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++      ++  + K + VS + EI+IE +P  +E++     R+ G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSERLMAMLRKYFNVSDDAEISIEMDPREIELDMLDHLRRIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +    +R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTFERVIEL 230

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             D +S++           ++   GD++ P E 
Sbjct: 231 NPDRMSVFNYAHLPSRFAAQIKIKGDMLPPPET 263


>gi|240949344|ref|ZP_04753687.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
 gi|240296295|gb|EER46944.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
          Length = 455

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  + R++   E ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYIHIPFCHKLCYFCACNKVITRHRHKVEIYLDYLEKEIRTRAPLFKQRKVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A +++ +  N+ V+ + EI+IE +P  +E++     R+ G NRIS+G+Q
Sbjct: 111 GTPTYLDEDQSARLMEMLKSNFNVAEDAEISIEMDPREIELDMLDHLRQIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++    + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQLLVNREQDEDFIFALMKRAKELGFVSTNVDLIYGLPKQNVESFMYTLERVVEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|254360730|ref|ZP_04976878.1| coproporphyrinogen oxidase [Mannheimia haemolytica PHL213]
 gi|153091300|gb|EDN73274.1| coproporphyrinogen oxidase [Mannheimia haemolytica PHL213]
          Length = 455

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   E ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRLVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  +  N+ VS + EI+IE +P  +E++     R  G NR+S+G+Q
Sbjct: 111 GTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAIGFNRLSMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             +++  R + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVESFMYTLKRVVEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|17548001|ref|NP_521403.1| coproporphyrinogen III oxidase [Ralstonia solanacearum GMI1000]
 gi|17430307|emb|CAD17072.1| probable oxygen-independent coproporphyrinogen III oxidase
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 510

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I +   EM  + +  GP R  + + +G
Sbjct: 98  LSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIGALAREMAMVARHIGPLRQATQLHWG 157

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ ++S+ E+++E +P        +     G NR SLG+
Sbjct: 158 GGTPTFLSHDEMRDVMAATREHFALTSDAEVSVELDPRHASDATLEVLAGLGFNRASLGI 217

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  +    +  AR + F  +SFDLIY LP Q    +   L R L 
Sbjct: 218 QDFDADVQRAIHRVQSVEQTRRVVDSARRLGFESISFDLIYGLPHQHTATFNATLDRVLE 277

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A D LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 278 MAPDRLSVYSYA-HLPHLFKPQRRIDALALPSADEKLDLLAMT 319


>gi|255514177|gb|EET90439.1| Coproporphyrinogen dehydrogenase [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 446

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 158/333 (47%), Gaps = 41/333 (12%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N + VY+H PFC + C +C +   +   ++ +E ++ +   E++    + G + + S+ 
Sbjct: 51  TNEINVYLHIPFCRQLCTFCGYLKTLNSEELRKE-YVSALKREIEMYAGILGAKKVISLN 109

Query: 76  FGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            GGGTPSL++P  +  I+D + K     + +  E++IEA P SVE + F  Y+  G+NR+
Sbjct: 110 IGGGTPSLLQPNELGEIIDTLKKANRNMLGTAKEVSIEATPESVEYDKFMEYKALGINRV 169

Query: 134 SLGVQSLEEQSLRFLGRNHNA----SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G++S  +  ++  GR HNA    S+AI  +   R  F  +  DL+  +  QT   +  
Sbjct: 170 SIGIESFADSEIKMSGR-HNAGNISSDAIKTLKEIR--FDNVVCDLMIGIEGQTTKTFSD 226

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS-------I 242
            +   L    D + +Y L +   T+  K   +G   L       + Y + +        +
Sbjct: 227 SVDTLLDLDPDTVEIYALGVIPSTVIGKRRPEG---LMGNRQKYECYEIARKKFLEKGYL 283

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA-------HSRVKVGS--HRV 293
            S H  ++ ++ +  ++  +++     +R    IG+G GA       H R    S   RV
Sbjct: 284 QSCHNRYS-KLKDGGYVQEDTI-----FRGTSLIGMGAGARSYAQNIHYRNPSDSLDGRV 337

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           AIS       ++  +  +G AV    FLS +++
Sbjct: 338 AIS------RYISKINSDGLAVETGIFLSEDER 364


>gi|51594379|ref|YP_068570.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108809512|ref|YP_653428.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108810414|ref|YP_646181.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145601123|ref|YP_001165199.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|150260915|ref|ZP_01917643.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CA88-4125]
 gi|153950356|ref|YP_001399025.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|161484735|ref|NP_671101.2| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|161511483|ref|NP_991426.2| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|162421654|ref|YP_001604667.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|165926183|ref|ZP_02222015.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165940226|ref|ZP_02228756.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011477|ref|ZP_02232375.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166213708|ref|ZP_02239743.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167402108|ref|ZP_02307585.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167418791|ref|ZP_02310544.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167427043|ref|ZP_02318796.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470513|ref|ZP_02335217.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           FV-1]
 gi|170026399|ref|YP_001722904.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|186893366|ref|YP_001870478.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|218927242|ref|YP_002345117.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229836130|ref|ZP_04456298.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Pestoides A]
 gi|229841951|ref|ZP_04462106.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229900596|ref|ZP_04515720.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Nepal516]
 gi|294502130|ref|YP_003566192.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|51587661|emb|CAH19261.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774062|gb|ABG16581.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108781425|gb|ABG15483.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|115345853|emb|CAL18711.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CO92]
 gi|145212819|gb|ABP42226.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|149290323|gb|EDM40400.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CA88-4125]
 gi|152961851|gb|ABS49312.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162354469|gb|ABX88417.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           Angola]
 gi|165911858|gb|EDR30505.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922043|gb|EDR39220.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989623|gb|EDR41924.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205110|gb|EDR49590.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962785|gb|EDR58806.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167048483|gb|EDR59891.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167053970|gb|EDR63801.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752933|gb|ACA70451.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis YPIII]
 gi|186696392|gb|ACC87021.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681935|gb|EEO78027.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Nepal516]
 gi|229690261|gb|EEO82315.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229706578|gb|EEO92584.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Pestoides A]
 gi|262360208|gb|ACY56929.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|262364155|gb|ACY60712.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
 gi|294352589|gb|ADE62930.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
          Length = 457

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 177/405 (43%), Gaps = 27/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +++    + E +IE +P  +E++    
Sbjct: 99  LFTGRQVSQMHWGGGTPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-----L 238
              +   L+R      D LS++       +LF    K  D  LP+    +D+       L
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTIRFL 277

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           T+S     G+  +   +     A+   +LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 337 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           G         D E     ++ G +ER + + LR T RG  ++ ++
Sbjct: 393 GIRFADYFAEDFELLAPFEQDGLVERNE-TGLRVTPRGRLLIRNI 436


>gi|310765932|gb|ADP10882.1| coproporphyrinogen III oxidase [Erwinia sp. Ejp617]
          Length = 457

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +L   R++S + +GG
Sbjct: 53  LSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + I  ++  + +++  S   EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLNKEQIRRLMACLRQHFHFSDTAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +Q    + R  +     A +  AR + F   + DLIY LP QT   +   LQ+ +  
Sbjct: 173 DFNKQVQEKVNRVQDEETIFALVARARQLGFISTNIDLIYGLPAQTPESFAFTLQKVVEL 232

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 233 NPDRLSVF 240


>gi|270265258|ref|ZP_06193520.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera 4Rx13]
 gi|270040892|gb|EFA13994.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera 4Rx13]
          Length = 457

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 4/241 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+++         L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFQSAAARYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQTHKADEYLAVLAREIAERAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +  + +GGGTP+ +    I+ +   + +++    + E++IE +P  +E++    
Sbjct: 99  LFAGRKVGQMHWGGGTPTYLSKSQISRLTAMLRQHFDFLPDAEMSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+  L Q+I 
Sbjct: 219 PESFAFTLERVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAQQKLDI--LQQTIA 275

Query: 244 S 244
           S
Sbjct: 276 S 276


>gi|59710687|ref|YP_203463.1| coproporphyrinogen III oxidase [Vibrio fischeri ES114]
 gi|59478788|gb|AAW84575.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Vibrio fischeri ES114]
          Length = 457

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 5/244 (2%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++   T      L +Y+H PFC K C +C  N  + R+    + ++ S   E++    
Sbjct: 39  AEFDMACTQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + FGGGTP+ +       ++  +   +      EI+IE +P  +E++    
Sbjct: 99  LFTERKVTQLHFGGGTPTFLTKVQFTRLMTLLRGEFQFEEGAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  + + R+ +    I  +  A+++ F   + DLIY LPKQ+
Sbjct: 159 LRDEGFNRLSIGVQDFNKEVQQLVNRDQDEDFIIQMVQRAKDLGFRSTNLDLIYGLPKQS 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQS 241
                  ++R L      LS++       TLF      KD DL  P+E + + L    ++
Sbjct: 219 ADSLANTIKRVLEMEPGRLSVFNYA-HMPTLFAAQRKIKDADLPAPAEKLVM-LQETIET 276

Query: 242 ITSA 245
           +T A
Sbjct: 277 LTGA 280


>gi|21960794|gb|AAM87352.1|AE013983_5 O2-independent coproporphyrinogen III oxidase [Yersinia pestis KIM
           10]
 gi|45434742|gb|AAS60303.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 459

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 177/405 (43%), Gaps = 27/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +++    + E +IE +P  +E++    
Sbjct: 101 LFTGRQVSQMHWGGGTPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-----L 238
              +   L+R      D LS++       +LF    K  D  LP+    +D+       L
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTIRFL 279

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           T+S     G+  +   +     A+   +LH  N+  Y      D +G+G  A S +    
Sbjct: 280 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 338

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 339 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 394

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           G         D E     ++ G +ER + + LR T RG  ++ ++
Sbjct: 395 GIRFADYFAEDFELLAPFEQDGLVERNE-TGLRVTPRGRLLIRNI 438


>gi|212637756|ref|YP_002314281.1| coproporphyrinogen III oxidase [Shewanella piezotolerans WP3]
 gi|212559240|gb|ACJ31694.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
          Length = 458

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 18/313 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L     ++ I 
Sbjct: 51  SDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKDYLVTQIH 110

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  +   +  N+ V+   E +IE +P  +E++     ++AG NRIS+
Sbjct: 111 WGGGTPTFLTPEQILTLSALVKANFNVAEVGEYSIEVDPREIELSMLDTLKEAGFNRISI 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 171 GVQDFNKKVQIAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETFAETMQRV 230

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH----GLH 249
           L    D LS++    +       +  KD DL  P + + + L+   +++T A     G+ 
Sbjct: 231 LDLDPDRLSVFNYAHLPSRFAAQRKIKDEDLASPQQKLDM-LHQTIETLTGAGYQYIGMD 289

Query: 250 AYEISNH--SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +   +   S L  E   + N+  Y      D +G+G  + S++           +K   
Sbjct: 290 HFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIG----DCYAQNQKDVR 345

Query: 303 SWLKMVRKNGHAV 315
            + + +  NGHA+
Sbjct: 346 PYFESIDANGHAL 358


>gi|197303674|ref|ZP_03168711.1| hypothetical protein RUMLAC_02401 [Ruminococcus lactaris ATCC
           29176]
 gi|197297194|gb|EDY31757.1| hypothetical protein RUMLAC_02401 [Ruminococcus lactaris ATCC
           29176]
          Length = 481

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 110/212 (51%), Gaps = 3/212 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S    +YV  PFC   C YC F+S  V  +K   + ++ + + E++ + ++ G R   ++
Sbjct: 154 SEGFSLYVGIPFCPSICSYCSFSSSPVGEWKDKIDAYLDALIKELKALGRMAGERKPDTV 213

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  I   + +S   E T+EA  P S+     +  R+  V RI
Sbjct: 214 YVGGGTPTTLEAGQLDRLLGTIRNCFDLSELKEFTVEAGRPDSITREKLEVIRRYPVTRI 273

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   E      +AR + F  ++ DLI  LP +T    +  L+
Sbjct: 274 SVNPQTMQQKTLDLVGRKHTVEEVERIFCMARKLGFDNINMDLIAGLPGETRVDMQDTLR 333

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           R  + A D L+++ L I++   F +  +  DL
Sbjct: 334 RIKALAPDSLTVHALAIKRAAKFGQEGRTMDL 365


>gi|24376202|ref|NP_720246.1| coproporphyrinogen III oxidase [Shewanella oneidensis MR-1]
 gi|24351257|gb|AAN57689.1|AE015905_1 oxygen-independent coproporphyrinogen III oxidase [Shewanella
           oneidensis MR-1]
          Length = 458

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 8/245 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+    
Sbjct: 43  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 99  PLFKHYSVTQMHWGGGTPTFLNPEQIIKLTALIKANFNFADEGEFSIEVDPREIELSMLD 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP Q
Sbjct: 159 TLKEAGFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++  L Q+I
Sbjct: 219 TPETFAATMQRVLDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTI 275

Query: 243 TSAHG 247
            +  G
Sbjct: 276 ETLTG 280


>gi|50118989|ref|YP_048156.1| coproporphyrinogen III oxidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609515|emb|CAG72948.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 457

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 16/295 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A+++ +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQHAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FAGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+ + F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-----NLT 239
             +   LQR    +   LS++       +LF    K  D  LPS    +D+      +LT
Sbjct: 220 ESFAFTLQRVAELSPHRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQKLDILQQTIGSLT 278

Query: 240 QSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRY-----GDYIGIGPGAHSRV 286
           QS     G+  +   +     A+   +LH  N+  Y      D +G+G  A S +
Sbjct: 279 QSGYQFIGMDHFARPDDELAVAQREGTLHR-NFQGYTTQGDSDLLGMGVSAISMI 332


>gi|323485944|ref|ZP_08091277.1| hypothetical protein HMPREF9474_03028 [Clostridium symbiosum
           WAL-14163]
 gi|323400734|gb|EGA93099.1| hypothetical protein HMPREF9474_03028 [Clostridium symbiosum
           WAL-14163]
          Length = 485

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 6/256 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC   C YC F S  + +++   + ++ +   EM ++ +    R + +++FGGG
Sbjct: 169 LYIGIPFCPTTCLYCSFTSFPIGKWEGKTKLYLDALFREMDYVAEKMKGRPLDTVYFGGG 228

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ + P ++  +L  +   +      E T+EA  P S+     +  RK G+ RIS+  Q
Sbjct: 229 TPTSLNPGDLDALLCKVEAAFPTDKVREFTVEAGRPDSITQEKLEVLRKHGITRISINPQ 288

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR H   +     HLAR + F  ++ DLI  LP++T+   +  ++   + 
Sbjct: 289 TMNQKTLDLIGRRHTVEDVREKFHLARGLGFDNINMDLIVGLPEETLCDVKNTMEEIKAL 348

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D ++++ L I++      M K+    L  EN   ++ ++T       G++ Y +    
Sbjct: 349 APDSVTVHSLAIKRAARL-NMFKERYGNLKIENTQ-EMIDMTARYAEEMGMNPYYLYRQK 406

Query: 258 FLGAESLHNLNYWRYG 273
            + A +  N+ Y   G
Sbjct: 407 NM-AGNFENVGYAAPG 421


>gi|259906709|ref|YP_002647065.1| coproporphyrinogen III oxidase [Erwinia pyrifoliae Ep1/96]
 gi|224962331|emb|CAX53786.1| O2-independent coproporphyrinogen III oxidase [Erwinia pyrifoliae
           Ep1/96]
 gi|283476492|emb|CAY72307.1| O2-independent coproporphyrinogen III oxidase [Erwinia pyrifoliae
           DSM 12163]
          Length = 457

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +L   R++S + +GG
Sbjct: 53  LSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVSQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + I  ++  + +++  S   EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLNKEQIGRLMACLRQHFHFSDTAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +Q    + R  +     A +  AR + F   + DLIY LP QT   +   LQ+    
Sbjct: 173 DFNKQVQEKVNRVQDEETIFALVARARQLGFISTNIDLIYGLPAQTPESFAFTLQKVAEL 232

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 233 NPDRLSVF 240


>gi|307128784|ref|YP_003880800.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Dickeya dadantii 3937]
 gi|306526313|gb|ADM96243.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Dickeya dadantii 3937]
          Length = 457

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 8/252 (3%)

Query: 1   MKYLSAYENNMTGQG-----SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           +++  +Y+N    Q      +  L +Y+H PFC + C +C  N  V R     + ++   
Sbjct: 30  LEFSDSYDNAAFAQAVARYPNRPLSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDRL 89

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             E++    L   R ++ + +GGGTP+ +    I+ ++  + + +  +   E+++E +P 
Sbjct: 90  ALEIRQRAPLFAGRVVTQMHWGGGTPTFLNKTQISRLMGLLRQYFHFAEQAEMSLEVDPR 149

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
            +E++     R  G NR+S+GVQ   ++  R + R  + +   A I  A+ + F   + D
Sbjct: 150 EIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFASTNID 209

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAV 233
           LIY LPKQT   +   LQR  +   D LS++       +LF    K  +  LP +E    
Sbjct: 210 LIYGLPKQTPDSFAFTLQRVAALRPDRLSVFNYA-HLPSLFAAQRKIKEADLPDAEQKLA 268

Query: 234 DLYNLTQSITSA 245
            L    QS+T+A
Sbjct: 269 ILQQTIQSLTAA 280


>gi|325289605|ref|YP_004265786.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324965006|gb|ADY55785.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 406

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 27/220 (12%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENF-------IQSFLTEMQWMRQLTGPRSISS 73
           +Y+H P+C K C +C+    +RR     +++       I+S+  E+ ++RQLT      +
Sbjct: 42  IYIHIPYCRKICSFCNM---MRRLGSPGDDYARLIIREIRSY-GELDYIRQLT----FQA 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTP+ +  + I  IL  + +++ ++ + EIT+E+  S +         + GVNRI
Sbjct: 94  VYFGGGTPTTLSSRAIQEILAALRESFRLADDAEITLESTVSELTEEKINVLHEGGVNRI 153

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+  ++  + LGRN +  EA   + L +++ F  ++ D+IY  P QT  + + +L 
Sbjct: 154 SVGIQTFNDRGRQLLGRNGSGKEAYQKLLLLKSLGFENVNIDIIYHYPHQTREELDEDLN 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL--PSEN 230
           +  S  +   S Y L          MH D  L +  PSEN
Sbjct: 214 KVFSLGLASFSFYSLI---------MHPDSALQISSPSEN 244


>gi|290969021|ref|ZP_06560556.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290780977|gb|EFD93570.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 559

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 23/336 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFF 76
            Y+H PFC  KC YC F  +     V ++ +I + + E++       PR     I ++F 
Sbjct: 71  AYIHIPFCKTKCLYCGFFQNGTDQAV-EDQYIDALIKELE--AAAVAPRLKDSLIHAVFI 127

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P+N+A +L  I +   ++++ E+T+E     V   N + +   GVNR+SLG
Sbjct: 128 GGGTPTSLSPRNMARLLQAIQRCLPLANDYELTLEGRIHDVVPENMEVWFANGVNRVSLG 187

Query: 137 VQSLEEQSLRFLGRNHNAS------EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           VQS   +  R +GR  +        E + + + + N+      DLIY LP Q +  W+ +
Sbjct: 188 VQSFHTEIRRNVGRLDDQETVLKHLENLCSYNQSANV-----IDLIYGLPGQDLDIWKED 242

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLH 249
           L   ++  VD   LYQL +  G+   K  + G L    +      +++  ++  + HG  
Sbjct: 243 LDLLMASGVDGCDLYQLNVFDGSDLNKAIQAGRLPAAATTEYQSAMFSFGKNYLAQHGYK 302

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
              I + S    E SL+N            G GA   V   S  +   I+ + E++++M 
Sbjct: 303 RLNICHWSCTNRERSLYNTLARSAAPMFPFGSGAGGHVDGYSTMLHRIIQPY-EAYVQMG 361

Query: 309 RKNGHAVVEKEFLSS--EQQADEFLMMGLRLREGIS 342
           +K   A++++  L    E+   +F M  + L+  I+
Sbjct: 362 KKPFMALMKQSPLEPIVEEVQAQFEMGAVNLQTIIA 397


>gi|196228798|ref|ZP_03127664.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
 gi|196227079|gb|EDY21583.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
          Length = 247

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 17/256 (6%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS ++  L+ LGR H+A++A     L R   F  ++ DL++A+P QT+ QW+  L R +
Sbjct: 1   MQSWDDGLLKTLGRVHDAAQAEKTFGLLREAGFSNINIDLMFAVPGQTLAQWQATLDRTV 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   +H+S Y LT E+ T +++  + G      E  A  L+  T    +  G   YEISN
Sbjct: 61  ALRPEHVSSYCLTYEEDTEYFRQLQLGTFRQDDERDAA-LFETTIDTLTGAGFDHYEISN 119

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES--WLKMVRKNGH 313
           ++  G ES HN  YWR  DY+G GP A S   VG  R     +  P+S  +++ V     
Sbjct: 120 YAKPGFESAHNFAYWRGADYLGFGPSAFS--TVGLQR----WQNVPDSAAYMQRVFAGES 173

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
                E L+   +  E     +R REGI+       +         R  +  GF+E+ + 
Sbjct: 174 TTGFSEELTPAMRTGEIAAFAVRTREGIATDALHRWSKEM------REFRELGFLEQ-RG 226

Query: 374 SRLRCTQRGMTMLDSV 389
            R   T+RG  M DSV
Sbjct: 227 DRTVLTRRGKLMADSV 242


>gi|297203016|ref|ZP_06920413.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148276|gb|EDY56043.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 489

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 5/219 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Q +    +Y+H PFC ++C +C F   +   +   E ++++   E+     LTG  +  +
Sbjct: 52  QATRMCSIYLHIPFCEQRCTFCHFAKEILPPEQRVERYLRTLYAELAGTGALTGHPTAQT 111

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ----GYRKAG 129
           ++FGGGTPS + P+ I  +   + ++  V+++ E T E +PS +   +++       +AG
Sbjct: 112 VYFGGGTPSYLNPRQITEVFARLRESVQVTADTETTFELHPSVIGAPDYEDRLDAIAEAG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
           VNR   GVQS+E++ L  L R H A++    +  LA      +S DLI+ LP Q +  W 
Sbjct: 172 VNRWVFGVQSMEDRILEKLNRGHTAADVHRLLGMLADRGVENLSVDLIFGLPYQNLENWY 231

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
             +   ++  V+  +++ L  ++       +++   + P
Sbjct: 232 TTICSLVAAGVEKFNIFPLMFKQSDPISMHYRNSPEIFP 270


>gi|146294994|ref|YP_001185418.1| coproporphyrinogen III oxidase [Shewanella putrefaciens CN-32]
 gi|145566684|gb|ABP77619.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           putrefaciens CN-32]
          Length = 446

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 4/233 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L    S++ + 
Sbjct: 39  SDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRAPLFKHYSVTQMH 98

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++     ++AG NRIS+
Sbjct: 99  WGGGTPTFLNPEQILKLTSLIKANFNFADEGEFSIEVDPREIELSMLDTLKEAGFNRISI 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 159 GVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQTPETFAATMQRV 218

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L  + D LS++         F    K  D  LPS    +++  L Q+I +  G
Sbjct: 219 LDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTIETLTG 268


>gi|319424456|gb|ADV52530.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           putrefaciens 200]
          Length = 458

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 4/233 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L    S++ + 
Sbjct: 51  SDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRAPLFKHYSVTQMH 110

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++     ++AG NRIS+
Sbjct: 111 WGGGTPTFLNPEQILKLTSLIKANFNFADEGEFSIEVDPREIELSMLDTLKEAGFNRISI 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 171 GVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQTPETFAATMQRV 230

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L  + D LS++         F    K  D  LPS    +++  L Q+I +  G
Sbjct: 231 LDLSPDRLSVFNYA-HLPARFAAQRKIKDEHLPSPKQKLEM--LHQTIETLTG 280


>gi|121728291|ref|ZP_01681322.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V52]
 gi|147675179|ref|YP_001218302.1| coproporphyrinogen III oxidase [Vibrio cholerae O395]
 gi|121629421|gb|EAX61850.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V52]
 gi|146317062|gb|ABQ21601.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           O395]
 gi|227011882|gb|ACP08092.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           O395]
          Length = 480

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAVTFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|254291925|ref|ZP_04962706.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           AM-19226]
 gi|150422135|gb|EDN14101.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           AM-19226]
          Length = 480

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAVTFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|302670708|ref|YP_003830668.1| oxygen-independent coproporphyrinogen III oxidase HemN1
           [Butyrivibrio proteoclasticus B316]
 gi|302395181|gb|ADL34086.1| oxygen-independent coproporphyrinogen III oxidase HemN1
           [Butyrivibrio proteoclasticus B316]
          Length = 527

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 11/267 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ +  Y    +++I     E+ ++ +    +++ +I+
Sbjct: 200 NGYSLYIGIPFCPTTCLYCSFTSYPIGAYSKIVDDYISCLEKEIDYVAENFEGKTLDTIY 259

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +EP  +  ++  +      S   E T+E+  P S+     +  +K GV RIS
Sbjct: 260 IGGGTPTTLEPHQLERLIGYLQDKLDTSHVKEFTVESGRPDSITREKLKTMKKMGVTRIS 319

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ +++LR +GR H  ++ I + H+AR   F  ++ D+I  LP +T       +  
Sbjct: 320 VNPQTMRDETLRLIGRRHTVAQLIDSFHMAREEGFDNINMDIILGLPGETAEDVAYTMSE 379

Query: 194 ALSYAVDHLSLYQLTIEKGT----LFYKMHKDGDLVLP---SENVAVDLYNLTQSITSAH 246
                 D L+++ L I++G+    + ++    G+L +P   S N   ++ N+     +  
Sbjct: 380 IKKLDPDDLTVHSLAIKRGSRLAEVLHEKELKGELKVPILESINNTEEMMNIASRGAAEL 439

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG 273
            L  Y +     +   +  N  Y R G
Sbjct: 440 SLEPYYLYRQKNISG-NFENTGYARKG 465


>gi|157959926|ref|YP_001499960.1| coproporphyrinogen III oxidase [Shewanella pealeana ATCC 700345]
 gi|157844926|gb|ABV85425.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           pealeana ATCC 700345]
          Length = 446

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 18/313 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L     ++ I 
Sbjct: 39  SDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKNYLVTQIH 98

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  +   I  N+ V+   E +IE +P  +E++     ++AG NRIS+
Sbjct: 99  WGGGTPTFLTPEQILKLSALIKANFNVADVGEYSIEVDPREIELSMLDTLKEAGFNRISI 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 159 GVQDFNKKVQVAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETFAETMQRV 218

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH----GLH 249
           L    D LS++    +       +  KD DL  P + + + L+   +++T A     G+ 
Sbjct: 219 LDLNPDRLSVFNYAHLPSRFAAQRKIKDEDLASPQQKLDM-LHQTIETLTGAGYQYIGMD 277

Query: 250 AYEISNH--SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +   +   S L  E   + N+  Y      D +G+G  + S++     +    I  + E
Sbjct: 278 HFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYFE 337

Query: 303 SWLKMVRKNGHAV 315
           S    +  NGHA+
Sbjct: 338 S----IDANGHAL 346


>gi|229525012|ref|ZP_04414417.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           bv. albensis VL426]
 gi|229338593|gb|EEO03610.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           bv. albensis VL426]
          Length = 480

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|149191761|ref|ZP_01870000.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148834403|gb|EDL51401.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 470

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 5/245 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 51  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHAHKADEYLDVIEHEIRQRA 110

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +      EI+IE +P  +E++   
Sbjct: 111 SLLQGRKVTQLHFGGGTPTFLTKSQISRLMAILRGEFFFQEGAEISIEVDPREIELDMLD 170

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A    A+ + F   + DLIY LPKQ
Sbjct: 171 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMAERAKQLGFRSTNLDLIYGLPKQ 230

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T  ++   L++ L+     LS++        LF      KD DL    E +A+ L +   
Sbjct: 231 TKQRFAETLEQVLTMRPGRLSVFNYA-HMPNLFAAQRKIKDEDLPQAEEKMAI-LQDTIA 288

Query: 241 SITSA 245
           ++T A
Sbjct: 289 TLTGA 293


>gi|153803400|ref|ZP_01957986.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-3]
 gi|153830623|ref|ZP_01983290.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           623-39]
 gi|229515850|ref|ZP_04405308.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TMA 21]
 gi|229520092|ref|ZP_04409520.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TM 11079-80]
 gi|297581842|ref|ZP_06943763.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           RC385]
 gi|124121057|gb|EAY39800.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-3]
 gi|148873895|gb|EDL72030.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           623-39]
 gi|229342880|gb|EEO07870.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TM 11079-80]
 gi|229347113|gb|EEO12074.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TMA 21]
 gi|297533936|gb|EFH72776.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           RC385]
          Length = 480

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|15640148|ref|NP_229775.1| coproporphyrinogen III oxidase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121587720|ref|ZP_01677481.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           2740-80]
 gi|153820261|ref|ZP_01972928.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           NCTC 8457]
 gi|153822314|ref|ZP_01974981.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           B33]
 gi|227080352|ref|YP_002808903.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           M66-2]
 gi|229508394|ref|ZP_04397898.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           BX 330286]
 gi|229508925|ref|ZP_04398415.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           B33]
 gi|229517039|ref|ZP_04406485.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC9]
 gi|229606667|ref|YP_002877315.1| coproporphyrinogen III oxidase [Vibrio cholerae MJ-1236]
 gi|254851500|ref|ZP_05240850.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MO10]
 gi|298501115|ref|ZP_07010915.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
 gi|9654516|gb|AAF93294.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121548019|gb|EAX58097.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           2740-80]
 gi|126509195|gb|EAZ71789.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           NCTC 8457]
 gi|126520140|gb|EAZ77363.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           B33]
 gi|227008240|gb|ACP04452.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           M66-2]
 gi|229346102|gb|EEO11074.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC9]
 gi|229354042|gb|EEO18975.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           B33]
 gi|229354667|gb|EEO19589.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           BX 330286]
 gi|229369322|gb|ACQ59745.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           MJ-1236]
 gi|254847205|gb|EET25619.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MO10]
 gi|297540149|gb|EFH76210.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
          Length = 480

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLHSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAVTFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|293630695|gb|AAN51576.2| coproporphyrinogen 3 oxidase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 449

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLT--GPRSIS 72
           + SL +Y+H PFC   C +C  N+ + +    ++ +I+S L E   +++++     R + 
Sbjct: 48  NTSLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYIESILLEFSNYLKEVPEIAKRELK 107

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +  GGGTP+ +  +N+ ++LD I K   +SS  E ++E +P        +  R  G  R
Sbjct: 108 ELHLGGGTPTYLSEKNLEILLDSILKKMNLSSKYEFSLEVDPRRTRDTQLKILRDFGFKR 167

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ  + +  R + R            L+R + +  ++FDLIY LPKQ +   +  +
Sbjct: 168 ISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIYGLPKQNLQNMKRTI 227

Query: 192 QRALSYAVDHLSLY 205
           ++ L    D ++ Y
Sbjct: 228 KKTLELRPDRIAFY 241


>gi|237737990|ref|ZP_04568471.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419870|gb|EEO34917.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 411

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 30/284 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFG 77
           G+YVH P+C K C +C+ N   ++     +++++    E +    ++    + I++IFFG
Sbjct: 44  GIYVHTPYCDKICSFCNMNR--KQVSNNLDDYVEYLCKEFEKYGSKKYVQGKEITTIFFG 101

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +   +  IL  +  ++ +SSN E T E    ++ +       K GVNR+S+G+
Sbjct: 102 GGTPTIYKEYQLEKILSTLTNSFNISSNCEFTFETTLHNLTLKKLAIMEKYGVNRLSIGI 161

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++  + L R +   E I  I  L +N    +  D+IY    +++ + E + + A  
Sbjct: 162 QTFSDRGRKLLNRTYEQKEIIKRIKELKKNFKGLICIDIIYNYLDESLEEIENDAKIATE 221

Query: 197 YAVDHLSLYQLTIEKGT------------LFYKMHKDGDLVLPS-ENVAVDLYNLTQSIT 243
             VD +S Y L I +G+              Y++++D +L     E    + Y L +   
Sbjct: 222 LEVDSISFYSLMIHEGSNLSKALNENKLNFNYQIYRDKELHHTFLEKTLNNGYKLLEHTK 281

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
             +G   Y            + N+N   + D   IG GA  RVK
Sbjct: 282 ITNGKDEYRY----------IKNIN--SFSDLFAIGVGAGGRVK 313


>gi|254226594|ref|ZP_04920175.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V51]
 gi|125620866|gb|EAZ49219.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V51]
          Length = 480

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|327483017|gb|AEA77424.1| Coproporphyrinogen III oxidase, oxygen- independent [Vibrio
           cholerae LMA3894-4]
          Length = 462

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 223 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 278 TITTLTG------AGYQFIGMD 293


>gi|262167039|ref|ZP_06034756.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC27]
 gi|262024557|gb|EEY43241.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC27]
          Length = 462

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 223 TAVTFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 278 TITTLTG------AGYQFIGMD 293


>gi|262189998|ref|ZP_06048303.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           CT 5369-93]
 gi|262034121|gb|EEY52556.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           CT 5369-93]
          Length = 462

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 223 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 278 TITTLTG------AGYQFIGMD 293


>gi|268611138|ref|ZP_06144865.1| coproporphyrinogen III oxidase [Ruminococcus flavefaciens FD-1]
          Length = 498

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 111/206 (53%), Gaps = 6/206 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRS--ISSI 74
           ++ +YV  PFC  +C YC F SH     +    ++I +   E++ +  L       I +I
Sbjct: 171 AVSLYVSIPFCPTRCSYCSFVSHSMDSAIKLMPDYINALCRELKIIGDLVKETDTKIDTI 230

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ I   ++ +I+  +  N+ + +  E ++EA  P ++     +  ++ G +RI
Sbjct: 231 YFGGGTPTSISADDLRMIMQTVQDNFDLDNVREYSVEAGRPDTITEEKLRVIKEYGADRI 290

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q+L +  L+ +GR H+  +A+ A  LAR + F  ++ DLI  LP +    +   L 
Sbjct: 291 SVNPQTLNDDVLKVIGRKHSGEDALRAFELARKVGFDNINTDLIAGLPTEQFDSFRNTLD 350

Query: 193 RALSYAVDHLSLYQLTIEK-GTLFYK 217
           + +  + + ++++ LTI++  TLF K
Sbjct: 351 KMIELSPESITVHTLTIKRSATLFEK 376


>gi|225017250|ref|ZP_03706442.1| hypothetical protein CLOSTMETH_01176 [Clostridium methylpentosum
           DSM 5476]
 gi|224950025|gb|EEG31234.1| hypothetical protein CLOSTMETH_01176 [Clostridium methylpentosum
           DSM 5476]
          Length = 494

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 115/216 (53%), Gaps = 9/216 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSISSI 74
           +YV  PFC  +C YC F S     K G    I  ++ ++    Q T          + ++
Sbjct: 166 LYVSIPFCPTRCAYCSFVSQAVEKK-GTAALIGEYVDKLCGELQATAEVVKQCGLQLETV 224

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ +    ++++LD I +++ +S   E T+EA    ++  +  +     GV RI
Sbjct: 225 YFGGGTPTSLSAGQLSILLDCIERSFDLSHLKEYTVEAGRADTITADKLEVLHDHGVGRI 284

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS  ++ L  +GR H A + + A HLAR++ F  ++ DLI  LP  T+  +E  ++
Sbjct: 285 SINPQSFNDRVLEQVGRRHTARQVVDAYHLARSVGFESINMDLIAGLPGDTLESFERTVE 344

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +A+  A ++++++ LTI++ +  ++  + G    P+
Sbjct: 345 QAVVLAPENITVHALTIKRSSALHEQGRAGGGDAPA 380


>gi|153214833|ref|ZP_01949641.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           1587]
 gi|124115076|gb|EAY33896.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           1587]
          Length = 480

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 YLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|24217078|ref|NP_714561.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 479

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLT--GPRSIS 72
           + SL +Y+H PFC   C +C  N+ + +    ++ +I+S L E   +++++     R + 
Sbjct: 78  NTSLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYIESILLEFSNYLKEVPEIAKRELK 137

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +  GGGTP+ +  +N+ ++LD I K   +SS  E ++E +P        +  R  G  R
Sbjct: 138 ELHLGGGTPTYLSEKNLEILLDSILKKMNLSSKYEFSLEVDPRRTRDTQLKILRDFGFKR 197

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ  + +  R + R            L+R + +  ++FDLIY LPKQ +   +  +
Sbjct: 198 ISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIYGLPKQNLQNMKRTI 257

Query: 192 QRALSYAVDHLSLY 205
           ++ L    D ++ Y
Sbjct: 258 KKTLELRPDRIAFY 271


>gi|323142307|ref|ZP_08077139.1| coproporphyrinogen dehydrogenase HemZ [Phascolarctobacterium sp.
           YIT 12067]
 gi|322413191|gb|EFY04078.1| coproporphyrinogen dehydrogenase HemZ [Phascolarctobacterium sp.
           YIT 12067]
          Length = 488

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 31/308 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           G+Y+  P+C  +C YC F +  V + +  Q+NF+     ++Q + QL G  S  + S++ 
Sbjct: 159 GIYIGVPYCPSRCSYCSFPAGIVPQDEESQQNFVNMIEQDLQNVVQLIGMHSLRVKSLYI 218

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE-------ITIEAN-PSSVEVNNFQGYRKA 128
           GGGTP+ +  +  A +L  + +   + SN E        T+EA  P             A
Sbjct: 219 GGGTPTSLSDKVFARLLQAVERRL-LQSNCEGLRHLREFTVEAGRPDCFSAAKLAAMEAA 277

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNRIS+  QS  +++L+ +GR H+  +   A  L R    P ++ DLI  LP++T  + 
Sbjct: 278 GVNRISVNPQSFHDKTLQLIGRRHSVKDFYNAYELVRKSRIPVVNVDLIIGLPQETEQEI 337

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L++A+  A ++L+++ LT+++    ++  +   L   +   A  +      + +A G
Sbjct: 338 AYSLEQAVKLAPENLTVHTLTLKRSAPLFQKQEQAVL---TTQAAEKMVQRAAEMAAAIG 394

Query: 248 LHAYEISNHSFL------------GAESLHNLNYW-RYGDYIGIGPGAHSRVKV--GSHR 292
           L  Y +    ++            G ES++N+         IG+GP + S+V +  G H 
Sbjct: 395 LEPYYLYRQHYMLGHLANIGYAKPGTESIYNIQMMEERHPVIGVGPASASKVPLPDGHHL 454

Query: 293 VAISIEKH 300
             +++ K+
Sbjct: 455 HKLNMPKN 462


>gi|26553953|ref|NP_757887.1| coproporphyrinogen III oxidase [Mycoplasma penetrans HF-2]
 gi|26453961|dbj|BAC44291.1| oxygen-independent coproporphyrinogen III oxidase [Mycoplasma
           penetrans HF-2]
          Length = 351

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 148/331 (44%), Gaps = 40/331 (12%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFGGG 79
           +Y+H PFC + C YCDF     R K    N I S++ ++  + ++    +   +I+  GG
Sbjct: 9   LYIHIPFCQEICTYCDF----YRTKTKDPNIINSYVKKI--VSEIKEDNNQYKTIYIEGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  +     + +N E TIEANP  +  +  +   K  VNRIS+GVQ+
Sbjct: 63  TPNFLNDNLLDELLSPLKN--KLQNNYEFTIEANPEFITSSQIETLLKNNVNRISMGVQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ L R HN    I AI+L  ++    +S D IY LP    +  E        Y 
Sbjct: 121 TNNNILKLLRRTHNIENVIEAINLLHKHNMKNISCDFIYNLPLLKNSDLEETFNFIEKYK 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL--HAYEISNH 256
           ++H+S Y L I++G++  K            NV  + ++L Q     + L  + YEISN 
Sbjct: 181 INHISFYSLEIKEGSILNKQKYQI-------NVDKEEHHLEQIKAYFNKLNYYRYEISNW 233

Query: 257 SFLGA-ESLHNLNYWRYGDY--IGI-GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +   A  S HN+ YW   D+  IGI G G  + +   ++   +  +K    W        
Sbjct: 234 ALEPAYYSKHNIAYWDLKDWKAIGISGFGLENNIYYKNNGTILDWKKEESEW-------- 285

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                       +  +   +MGLR   GI +
Sbjct: 286 ---------DDNELFENIFIMGLRKTNGIDL 307


>gi|269469011|gb|EEZ80577.1| hypothetical protein Sup05_1371 [uncultured SUP05 cluster
           bacterium]
          Length = 400

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 2/198 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGP 68
           +++ +  N + +Y H PFC   C YC  N  V + K   E ++Q    E+    +L    
Sbjct: 41  SLSNERKNPISLYCHIPFCDTVCFYCGCNKVVTKDKGKAEPYLQRLFKEIDRQAKLFDST 100

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + FGGGTP+ +    I  + + +   +  +   E +IE +P  V+ N  +   KA
Sbjct: 101 RVVEQMHFGGGTPTFLSNDQILALSEKLQSAFNFAQEGEYSIEIDPRGVDENTIKALAKA 160

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
             NRISLGVQ    Q  + + R  +  +  + I  AR N F  +S DLIY LPKQ++  +
Sbjct: 161 RFNRISLGVQDFNSQVQKAVNRIQSFEQTKSVIEFARANGFESISIDLIYGLPKQSVQTF 220

Query: 188 EMELQRALSYAVDHLSLY 205
           E  L +      D +SL+
Sbjct: 221 ETTLNQVAQLRPDRISLF 238


>gi|255743930|ref|ZP_05417885.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholera
           CIRS 101]
 gi|262151169|ref|ZP_06028308.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           INDRE 91/1]
 gi|255738413|gb|EET93803.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholera
           CIRS 101]
 gi|262031063|gb|EEY49688.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           INDRE 91/1]
          Length = 462

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLHSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K+ DL    E +A+    L Q
Sbjct: 223 TAVTFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKEADLPAAEEKLAI----LQQ 277

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 278 TITTLTG------AGYQFIGMD 293


>gi|45655598|ref|YP_003407.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602569|gb|AAS72044.1| O2-independent coproporphyrinogen III oxidase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 443

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLT--GPRSIS 72
           + SL +Y+H PFC   C +C  N+ + +    ++ +I+S L E   +++++     R + 
Sbjct: 42  NTSLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYIESILLEFSNYLKEVPEIAKRELK 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +  GGGTP+ +  +N+ ++LD I K   +SS  E ++E +P        +  R  G  R
Sbjct: 102 ELHLGGGTPTYLSEKNLEILLDSILKKMNLSSKYEFSLEVDPRRTRDTQLKILRDFGFKR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ  + +  R + R            L+R + +  ++FDLIY LPKQ +   +  +
Sbjct: 162 ISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIYGLPKQNLQNMKRTI 221

Query: 192 QRALSYAVDHLSLY 205
           ++ L    D ++ Y
Sbjct: 222 KKTLELRPDRIAFY 235


>gi|223039639|ref|ZP_03609925.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter rectus RM3267]
 gi|222879022|gb|EEF14117.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter rectus RM3267]
          Length = 423

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 133/277 (48%), Gaps = 32/277 (11%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I ++F GGGTPS ++      + + +A    +++N EIT EANP+S         +  GV
Sbjct: 127 IETVFIGGGTPSAVDGGYYERLFEAVAP--YLAANAEITTEANPNSASQKWLSQMKSCGV 184

Query: 131 NRISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           NR+S G QS  E  L+FLGR H+A    EA+A   +A      ++ DLIY     T  + 
Sbjct: 185 NRVSFGAQSFFEDKLKFLGRIHDARQIYEAVANAKIAG--LENINVDLIYGTKLDTKKRL 242

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E E Q   +  V H+S Y LT+E+ T F      G +    ++  +  + +   I  A G
Sbjct: 243 EQEAQNIRNIGVSHVSAYSLTLEENTPF-----AGKINYAKDSPRLAKF-MIDRIEEA-G 295

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG---SHRVAISIEKHPESW 304
           L  YEISN    G    HNL YW+  +Y+ IG  A     VG    HR       +  S 
Sbjct: 296 LKQYEISN---FGQICKHNLGYWQGKNYLAIGAYA-----VGFWRDHRF------YNASN 341

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           L    KN HA  + E LS+++   E + +G R   GI
Sbjct: 342 LNAYVKNPHA-KKIENLSTDELNLERIFLGARSIVGI 377



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 21 VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
          +YVH PFC  KCPYC F S      VG+ N   ++   M
Sbjct: 3  LYVHIPFCESKCPYCAFGS-----VVGKRNLTSAYFDAM 36


>gi|294138853|ref|YP_003554831.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           violacea DSS12]
 gi|293325322|dbj|BAJ00053.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           violacea DSS12]
          Length = 458

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 3/232 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H P+C K C YC  N  + R++   + +++   TE+     L     ++ I 
Sbjct: 51  SDKLSLYIHIPYCAKICYYCGCNKVITRHQHKADQYLEYLATEIIKRAPLFKDYLVTQIH 110

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P  I  + + I  N+ V+   E +IE +P  +E+      ++AG NRIS+
Sbjct: 111 WGGGTPTFLRPDQILNLSELIKANFNVAEVGEYSIEVDPREIELTMLDTLKEAGFNRISI 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 171 GVQDFNKKVQIAVNREQDEQFIFDLMAKAKELGFVSTNIDLIYGLPHQTPATFAETMQRV 230

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L    D LS++    +       +  KD DL  P + + + L+   +++T A
Sbjct: 231 LDLDPDRLSVFNYAHLPSRFAAQRKIKDEDLASPQQKLEM-LHQTIETLTGA 281


>gi|261364695|ref|ZP_05977578.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
 gi|288566982|gb|EFC88542.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
          Length = 606

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 9/242 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y+H PFC   C +C F  N+    Y  V  +  I+    E + +RQ  G   I +++FG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNAWKESYSSVYTDKIIEEMAAEAE-IRQGNG--KIRAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++  ++A ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GV
Sbjct: 112 GGTPTALQTPDLARLIRACYQYLPIADDCEFTIEGRMSHFDIEKAQACIEAGANRISIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ +    R LGR H   EA A +     I   +  DL++ LP QT   W+ +L+RA + 
Sbjct: 172 QTFDTAIRRRLGRKHGGDEAFAYLEKLCEINAVIVVDLMFGLPNQTDAVWQNDLERATAL 231

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  L  Y   +       +M + G    P   +V  D Y       +  G +  ++SN 
Sbjct: 232 PLSGLDTYAFNLYPMLPINRMVEKGAFPAPPGFDVQADQYAYAVETLAQKGWN--QVSNS 289

Query: 257 SF 258
            F
Sbjct: 290 HF 291


>gi|163748908|ref|ZP_02156160.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161331682|gb|EDQ02487.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 458

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 22/327 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K L++ +N+     S+ L +Y+H PFC K C YC  N  + R++   + +++   TE+  
Sbjct: 41  KLLTSIKNS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYLEYLATEIVK 96

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L     ++ I +GGGTP+ +    I  + + I  N+ V+   E +IE +P  +E+  
Sbjct: 97  RSPLFKDYLVTQIHWGGGTPTFLRSDQILKLSELIKANFNVAEVGEYSIEVDPREIELTM 156

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               ++AG NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP
Sbjct: 157 LDTLKEAGFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMAKAKELGFVSTNIDLIYGLP 216

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            QT   +   +QR L    D LS++    +       +  KD DL  P + + + L+   
Sbjct: 217 HQTPKTFAETMQRVLDLDPDRLSVFNYAHLPSRFAAQRKIKDEDLASPQQKLEM-LHQTI 275

Query: 240 QSITSAH----GLHAYEISNH--SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
           +++T A     G+  +   +   S L  E   + N+  Y      D +G+G  + S++  
Sbjct: 276 ETLTDAGYQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGD 335

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAV 315
              +    I  + ES    +  NGHA+
Sbjct: 336 CYAQNQKDIRPYFES----IDANGHAL 358


>gi|149277729|ref|ZP_01883869.1| coproporphyrinogen III oxidase [Pedobacter sp. BAL39]
 gi|149231417|gb|EDM36796.1| coproporphyrinogen III oxidase [Pedobacter sp. BAL39]
          Length = 460

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 16/258 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S+ + VY+H PFC   C YC  N+ + +    +  +I++ L E Q   QL   R  I  +
Sbjct: 56  SDGISVYIHLPFCESLCTYCGCNTRITKNHGVERPYIEAVLKEWQMYLQLFDARPKIKEM 115

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+++ L++DGI     +  + E + EA+P +    +    RK G  R+S
Sbjct: 116 HLGGGTPTFFSPEHLQLLIDGILDFADLHEDAEFSFEAHPGNTTSAHLIALRKLGFRRLS 175

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q  +      + R  +  E       AR I +  +++DLIY LP Q +      ++ 
Sbjct: 176 LGIQDFDPHVQLIINRIQSYQEVRDVTLKAREIGYTSINYDLIYGLPHQNLHGLSDTIEA 235

Query: 194 ALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--- 246
            L  + D ++ Y       +  G    + + + D  LPS ++  +LY L + +       
Sbjct: 236 VLKLSPDRIAFYSYAHVPWVRAGQ---RRYTEAD--LPSADLKQELYELGRKMLRTGGYV 290

Query: 247 --GLHAYEISNHSFLGAE 262
             G+  + ++N S   AE
Sbjct: 291 DIGMDHFTLTNDSLYTAE 308


>gi|300689867|ref|YP_003750862.1| coproporphyrinogen III oxidase [Ralstonia solanacearum PSI07]
 gi|299076927|emb|CBJ49540.1| Coproporphyrinogen III oxidase [Ralstonia solanacearum PSI07]
          Length = 490

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 3/223 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V +       +I++   EM  + +  GP R  + + +G
Sbjct: 78  LSLYVHLPFCANLCYYCGCNKVVTKDHARSARYIRALAREMAMIARHIGPLRQATQLHWG 137

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ ++S+ EI++E +P        +     G NR SLG+
Sbjct: 138 GGTPTFLSHDEMRDVMAATREHFALTSDAEISVELDPRHASDAALEVLAGLGFNRASLGI 197

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  +    +  AR + F  +SFDLIY LP Q    +   L R L 
Sbjct: 198 QDFDADVQRAIHRIQSVEQTRRVVDSARRLGFQSISFDLIYGLPHQHTATFNATLDRVLE 257

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            A + LS+Y        LF    +   L LPS +  +DL  +T
Sbjct: 258 MAPERLSVYSYA-HLPHLFKPQRRIDMLALPSADEKLDLLAMT 299


>gi|87311775|ref|ZP_01093890.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
 gi|87285559|gb|EAQ77478.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
          Length = 436

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 105/202 (51%), Gaps = 3/202 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFF 76
           LG+Y+H PFC K+C +C F  +  +     E ++ + + E++ + +    G R    ++F
Sbjct: 46  LGLYLHVPFCRKRCKFCYFRVYTDKNGSEVETYVSALVDEIELVSKQAAMGGRPFRFVYF 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS + P+ +  + D + K+ +     E+T E  P ++     +  R  GV R+SLG
Sbjct: 106 GGGTPSFLSPKQLQRLEDRLRKSISWDQAEEVTFECEPGTLSETKVKTLRDMGVTRLSLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           ++S  ++ L   GR H + E   A   + +  FP ++ DLI  +  +T   W   L + L
Sbjct: 166 IESFSDKILEENGRAHLSKEVYKAWEWIEKAQFPNVNIDLIAGMVGETWDTWRENLVKTL 225

Query: 196 SYAVDHLSLYQLTIEKGTLFYK 217
             + + +++YQ+ +   T++ K
Sbjct: 226 ELSPECVTIYQMELPFNTVYSK 247


>gi|331002006|ref|ZP_08325526.1| hypothetical protein HMPREF0491_00388 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411802|gb|EGG91207.1| hypothetical protein HMPREF0491_00388 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 474

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 147/303 (48%), Gaps = 20/303 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC  +C YC F S+ + ++K   + +I+S   E+  + ++   + + +++ GGG
Sbjct: 159 LYIGIPFCPTRCLYCSFTSYSISQWKKDTDIYIESLCKELIAVSKMYAGKKLQTVYMGGG 218

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +E   +A IL+ + +N+ +S+ +E+T+EA    S+     +  +  GV+RIS+  Q
Sbjct: 219 TPTSLEAYQLAKILNVVKENFDLSNLLELTVEAGRADSITREKLEALKATGVDRISINPQ 278

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++++++L  +GR+H+  +   +  LAR I F  ++ D I  L  + +        +   +
Sbjct: 279 TMQQKTLDLIGRHHSVEDIYESFSLAREIGFENINMDFIIGLNGENLDDVIDSFTKVREF 338

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK----DGDLVLPSENVAVDL--------YNLTQSITSA 245
           A + ++++ L +++       +K    D  L+L   N A+D         Y L +    A
Sbjct: 339 APESITIHSLALKRAARLNTENKREIMDNSLILSMINTAIDTCIDLGLNPYYLYRQKNMA 398

Query: 246 HGLHAYEISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPES 303
             L     S       E L+N L        I  G G  S++  G  R+  I   K P+ 
Sbjct: 399 GNLENIGFSKPH---KECLYNILIMEEKQTIIACGAGTSSKIVFGDGRIERIENVKDPKL 455

Query: 304 WLK 306
           +++
Sbjct: 456 YIE 458


>gi|108758201|ref|YP_633675.1| coproporphyrinogen III oxidase [Myxococcus xanthus DK 1622]
 gi|108462081|gb|ABF87266.1| oxygen-independent coproporphyrinogen III oxidase [Myxococcus
           xanthus DK 1622]
          Length = 457

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 3/232 (1%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E+  + + +  L +YVH PFC   C YC  N  + R +   + +I     E+  + Q  G
Sbjct: 49  EHAGSREHAEPLSLYVHLPFCRSLCWYCGCNVVISRDRAAADQYIDHLEMELDLVVQRLG 108

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             RS+S I +GGGTP+ ++ + +  +   + + + ++S+ E+ IE +P+          R
Sbjct: 109 CRRSLSQIHWGGGTPTFLDERQLERLWTALTRRFRIASDAEVAIEIHPAVTTPGQLTLLR 168

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G NR+S+G+Q  + +      R  +  E  A +  AR + F  ++FDLIY LP Q   
Sbjct: 169 SLGFNRVSMGLQDFDARVQEVTNRIQSPEETRALLEHARLLGFKGVNFDLIYGLPHQDAE 228

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            W   L   LS   D L++Y        L ++     +  +PS    ++L+ 
Sbjct: 229 GWARTLDTVLSMRPDRLAVYSFAFMPEVLKHQRRMPAE-AIPSGRAKLELFR 279


>gi|238759871|ref|ZP_04621027.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia aldovae
           ATCC 35236]
 gi|238701932|gb|EEP94493.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia aldovae
           ATCC 35236]
          Length = 464

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 2/244 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 46  TAFQQAVKCYPLRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 105

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 106 LFVGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 165

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
               G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 166 LHAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 225

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 226 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQRLDILQHTISFL 284

Query: 244 SAHG 247
           +  G
Sbjct: 285 TESG 288


>gi|167626131|ref|YP_001676425.1| coproporphyrinogen III oxidase [Shewanella halifaxensis HAW-EB4]
 gi|167356153|gb|ABZ78766.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           halifaxensis HAW-EB4]
          Length = 446

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 18/313 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+     L     ++ I 
Sbjct: 39  SDKLSLYIHIPFCAKLCYYCGCNKVITRHHHKADQYIEYLAAEIVKRAPLFKDYLVTQIH 98

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  +   +  N+ V+   E +IE +P  +E++     ++AG NRIS+
Sbjct: 99  WGGGTPTFLTPEQILTLSALVKANFNVAEVGEYSIEVDPREIELSMLDTLKEAGFNRISI 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +   +QR 
Sbjct: 159 GVQDFNKKVQVAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETFAETMQRV 218

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH----GLH 249
           L    D LS++    +       +  KD DL  P + + + L+   +++T A     G+ 
Sbjct: 219 LDLNPDRLSVFNYAHLPSRFAAQRKIKDEDLASPQQKLDM-LHQTIETLTGAGYQYIGMD 277

Query: 250 AYEISNH--SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +   +   S L  E   + N+  Y      D +G+G  + S++     +    I  + E
Sbjct: 278 HFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYFE 337

Query: 303 SWLKMVRKNGHAV 315
           S    +  NGHA+
Sbjct: 338 S----IDANGHAL 346


>gi|254518564|ref|ZP_05130620.1| coproporphyrinogen dehydrogenase [Clostridium sp. 7_2_43FAA]
 gi|226912313|gb|EEH97514.1| coproporphyrinogen dehydrogenase [Clostridium sp. 7_2_43FAA]
          Length = 474

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 140/274 (51%), Gaps = 10/274 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E  +  +   S+ +Y+   FC  +C YC F ++ +   K     ++++   E++ M++  
Sbjct: 135 EQELVNKDEKSIAIYIGMAFCPTRCFYCSFTANPIGSNKKLVNPYLEALTYEIREMKKYV 194

Query: 67  GPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             R+  I S++FGGGTP+ +  +    I+  I   + +   + E T+E   P S+ +   
Sbjct: 195 NERNLKIESVYFGGGTPTAVNNEEFEDIMKEIYNAFVLDKEILEFTVECGRPDSITLEKL 254

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q  RK    RIS+  Q++ +++L+ +GR H + + I   +LARN+ F  ++ D+I  LP 
Sbjct: 255 QTMRKYNTTRISINPQTMNDETLKMIGRGHTSKDVIDKFNLARNLGFDDINMDMIIGLPG 314

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVDLYNLT 239
           + + + E      L    D L+++ L++++ ++ Y+  + K G  +   + +++ +Y ++
Sbjct: 315 EGIKEAEYTANEILKLRPDSLTVHGLSLKRASILYENFILKKGIQIKKQDELSL-MYEVS 373

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +++  +  +  Y +     +   ++ NL Y + G
Sbjct: 374 RNLAKSLNIEPYYMYRQKNMVG-NMENLGYSKEG 406


>gi|295091160|emb|CBK77267.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Clostridium cf. saccharolyticum K10]
          Length = 518

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S  + +++     ++ +   EM ++ +    R + +++
Sbjct: 195 NGYSLYIGIPFCPTTCLYCSFTSFPIGKWQGRTGLYLNALFREMDYVAEKMKGRPLDTVY 254

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ + P+++  ILD + + + +    E T+EA  P S+     Q  R  G+ RIS
Sbjct: 255 FGGGTPTSLSPEDLDAILDKVERTFPMDQVKEFTVEAGRPDSITEEKLQVLRNHGITRIS 314

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H   +      LAR + F  ++ DLI  LP++        +++
Sbjct: 315 INPQTMKQETLDLIGRRHTVEQVKETFRLARRMGFDNINMDLIVGLPEEDEEDVRNTMEQ 374

Query: 194 ALSYAVDHLSLYQLTIEKG 212
                 D L+++ L I++ 
Sbjct: 375 IKELRPDSLTVHSLAIKRA 393


>gi|323141788|ref|ZP_08076656.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322413737|gb|EFY04588.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 470

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 5/199 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQ--LTGPRS 70
           Q +    +Y+H PFC  +C YC+F  +   ++  Q E ++Q+ L E+ +++Q  +   + 
Sbjct: 61  QPAQPTALYLHIPFCNLRCSYCNF--YRNPFEAEQVEEYVQALLAELDFLQQQGVFAKQR 118

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             ++FFGGGTPS++ P  I+ +L+ I    +++ N E+T E++   +  +        GV
Sbjct: 119 PEAVFFGGGTPSVLNPAQISALLNKIHSAASLADNCEVTFESSIYDLSADKLDACIAGGV 178

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR S GVQ+ +    R LGR +   E    +  A     ++  DLIY L  QT      +
Sbjct: 179 NRFSFGVQAFDTHLRRSLGRLNAKEEVTGKLEEAAAKGVKVIIDLIYGLNGQTQAMLLND 238

Query: 191 LQRALSYAVDHLSLYQLTI 209
           +  AL+  V  + LY+L I
Sbjct: 239 IGTALACGVSGMDLYKLQI 257


>gi|241664735|ref|YP_002983095.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12D]
 gi|240866762|gb|ACS64423.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12D]
          Length = 494

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 3/231 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y+H PFC   C YC  N  + + +     ++++   EM  +    GP R ++ + +G
Sbjct: 76  LSLYMHLPFCANLCYYCGCNKVITKDRSRSARYVETLAREMAMVASQIGPLRRVTQLHWG 135

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++    +++ V+++ EI++E +P   +    +   + G NR SLG+
Sbjct: 136 GGTPTFLAHDEMRAVMAATREHFDVANDGEISVELDPRHADDATLEVLAEIGFNRASLGI 195

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    R + R  +  E    +  AR +    +SFDLIY LP Q    +   L R L 
Sbjct: 196 QDFDPDVQRAVHRIQSVEETRRVVDTARRLGLESISFDLIYGLPYQRTETFNATLDRVLE 255

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            A D LS+Y        LF    +     LP+ +  +DL  +T     A G
Sbjct: 256 MAPDRLSVYSYA-HLPHLFKAQRRIDMFTLPTADEKLDLLAMTVERLVAEG 305


>gi|27383420|ref|NP_774949.1| hypothetical protein bll8309 [Bradyrhizobium japonicum USDA 110]
 gi|27356595|dbj|BAC53574.1| bll8309 [Bradyrhizobium japonicum USDA 110]
          Length = 443

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 16/213 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S+ +Y H PFC + C +C F   +       E ++ +   EM W        +I + F G
Sbjct: 16  SIDLYFHIPFCHQNCTFCHFGKEINPPPRRVERYLAALDKEMSWSDAALAGSAIETAFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRI 133
           GGTPS +    +  +   I K + + SN E++ E +PS  +     +      K GVNR 
Sbjct: 76  GGTPSFLTNNQLKALFGMIGKRFDL-SNSEVSFELHPSLAKQADAADRISTLLKGGVNRF 134

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
            LGVQ+L+   LR L R H   E +  + L + +    +S DL+Y LP+QT+  W   L 
Sbjct: 135 VLGVQTLDRDILRILNRGHGVDEVMQTVKLLKGMGVENLSLDLMYGLPQQTLRSWYGSL- 193

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                    + L  + +EK  +F  M K  D +
Sbjct: 194 ---------IGLLDMEVEKFNIFPLMFKSTDPI 217


>gi|153826294|ref|ZP_01978961.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-2]
 gi|149739962|gb|EDM54141.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-2]
          Length = 480

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K  DL    E +A+    L Q
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKQADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|295114805|emb|CBL35652.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [butyrate-producing bacterium SM4/1]
          Length = 395

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S  + +++     ++ +   EM ++ +    R + +++
Sbjct: 72  NGYSLYIGIPFCPTTCLYCSFTSFPIGKWQGRTGLYLNALFREMDYVAEKMKGRPLDTVY 131

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ + P+++  ILD + + + +    E T+EA  P S+     Q  R  G+ RIS
Sbjct: 132 FGGGTPTSLSPEDLDAILDKVERTFPMDQVKEFTVEAGRPDSITEEKLQVLRNHGITRIS 191

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H   +      LAR + F  ++ DLI  LP++        +++
Sbjct: 192 INPQTMKQETLDLIGRRHTVEQVKETFRLARRMGFDNINMDLIVGLPEEDEEDVRNTMEQ 251

Query: 194 ALSYAVDHLSLYQLTIEKG 212
                 D L+++ L I++ 
Sbjct: 252 IKELRPDSLTVHSLAIKRA 270


>gi|283795476|ref|ZP_06344629.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. M62/1]
 gi|291077141|gb|EFE14505.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. M62/1]
          Length = 518

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S  + +++     ++ +   EM ++ +    R + +++
Sbjct: 195 NGYSLYIGIPFCPTTCLYCSFTSFPIGKWQGRTGLYLNALFREMDYVAEKMKGRPLDTVY 254

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ + P+++  ILD + + + +    E T+EA  P S+     Q  R  G+ RIS
Sbjct: 255 FGGGTPTSLSPEDLDAILDKVERTFPMDQVKEFTVEAGRPDSITEEKLQVLRNHGITRIS 314

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H   +      LAR + F  ++ DLI  LP++        +++
Sbjct: 315 INPQTMKQETLDLIGRRHTVEQVKETFRLARRMGFDNINMDLIVGLPEEDEEDVRNTMEQ 374

Query: 194 ALSYAVDHLSLYQLTIEKG 212
                 D L+++ L I++ 
Sbjct: 375 IKELRPDSLTVHSLAIKRA 393


>gi|158320740|ref|YP_001513247.1| coproporphyrinogen III oxidase [Alkaliphilus oremlandii OhILAs]
 gi|158140939|gb|ABW19251.1| Coproporphyrinogen dehydrogenase [Alkaliphilus oremlandii OhILAs]
          Length = 499

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 135/286 (47%), Gaps = 20/286 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLT--GPRSISSI 74
            + +Y+  PFC  +C YC F S+  +      + ++ S   E++ +  L     + + +I
Sbjct: 176 KVSLYISIPFCPTRCLYCSFPSNPMKQSAHLVDVYVNSLCKEIEGVGNLVKEAGKYVQTI 235

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +     A I D I KN  ++S  E T+EA  P +++    +  + + V R+
Sbjct: 236 YIGGGTPTTLNVPQFARIFDAIKKNMDMNSIEEFTVEAGRPDTIDYEKLKFLKDSDVTRL 295

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ E +LR +GR H+  E + A H+A+ + F  ++ D+I  LP +        ++
Sbjct: 296 SINPQTMNECTLREIGREHSVGEVMVAYHMAKEVGFENINMDIIIGLPGEDEAMVAHTMR 355

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                A ++L+++ L I++ +   +  +   L    E  A+ +  +TQ      GL  Y 
Sbjct: 356 EIERLAPNNLTVHTLAIKRASRLKEQEETYSLAKDQE--AISMLEITQQYAENMGLKPYY 413

Query: 253 ISNHSFL------------GAESLHNLNYWRYGDYI-GIGPGAHSR 285
           +     +            G+E ++N+        I G+G GA S+
Sbjct: 414 MYRQKHMVGNLENIGYGKPGSECIYNIQIMEEKQTILGLGAGATSK 459


>gi|110597015|ref|ZP_01385304.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           ferrooxidans DSM 13031]
 gi|110341206|gb|EAT59671.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           ferrooxidans DSM 13031]
          Length = 472

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 3/236 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +  ++++ L E Q +     G  ++  +
Sbjct: 49  TTGISLYIHIPYCENHCYFCGCNAHRTQDHSYETPYLEALLKEWQMYTDVFPGRLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DGI KN     N   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFFSPENLIRLIDGICKNVNKMDNYMFSFETNPKSTTREHLEALYSVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       I LAR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 169 FGIQDFDPIVQEEINRLQSFELVKEKIDLAREIGFTSINFDLVYGLPKQTLATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +    D L+ Y        ++    K  +  LP  +V  +LY+   ++  + G H
Sbjct: 229 VMQLKPDRLAFYAYG-HNPHMYEGQRKFKEEDLPVGDVKQELYDKGSAMLESIGYH 283


>gi|261823705|ref|YP_003261811.1| coproporphyrinogen III oxidase [Pectobacterium wasabiae WPP163]
 gi|261607718|gb|ACX90204.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           wasabiae WPP163]
          Length = 457

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 4/240 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A+++ +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQHAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FVGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+ + F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR    +   LS++       +LF    K  D  LPS    +D+  L Q+I S
Sbjct: 220 ESFAFTLQRVAELSPHRLSVFNYA-HLPSLFAAQRKIKDADLPSAEQKLDI--LQQTIGS 276


>gi|326800913|ref|YP_004318732.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
 gi|326551677|gb|ADZ80062.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
          Length = 449

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 115/224 (51%), Gaps = 11/224 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           + +Y+H P+C + C YC  N+ + +    +  +I S L E Q ++ Q++    I  +  G
Sbjct: 52  ISLYIHLPYCERLCTYCGCNTRITKNHSVERPYIDSVLQEWQLYLAQMSVKPKIVDLHLG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P+N++ ++  I +   V  +   + EA+P++    +       G  R+SLG+
Sbjct: 112 GGTPTFFSPENLSYLIKEIIQYAHVDEHAAFSFEAHPANTTREHLDALFALGFRRLSLGI 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  R + R  + ++ I     AR I +  ++FDLIY LPKQ++ + +  +Q  ++
Sbjct: 172 QDFDAEVQRIINRKQSPADVIRVTQEARRIGYTSINFDLIYGLPKQSLLRIKDTIQMTIA 231

Query: 197 YAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLY 236
              D ++ Y       ++ G    +++ + D  LPS+   ++LY
Sbjct: 232 MHPDRIAFYSYAHVPWMKPGQ---RLYTEDD--LPSDEAKLELY 270


>gi|227355096|ref|ZP_03839507.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
 gi|227164883|gb|EEI49730.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
          Length = 457

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 8/229 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  + R+K   + ++     E+    +    R ++ + +GG
Sbjct: 53  LSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRARYFKNRKVTQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++ Q I+ ++  + +++    N E++IE +P  +E++        G NR+S+GVQ
Sbjct: 113 GTPTFLDKQQISRLVALLRQHFHFVENAELSIEIDPREIELDVIDHLHNEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  + +   + +  AR + F   S DLIY LPKQT   +   L++ +  
Sbjct: 173 DFNKEVQQKVNREQDEAFIFSLVARAREVGFHSTSIDLIYGLPKQTKESFAFTLKKVIEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITS 244
           + D LS++        LF      KD DL L  E + +    L ++IT+
Sbjct: 233 SPDRLSVFNYA-HLPNLFAAQRKIKDEDLPLAEEKLEI----LQETITT 276


>gi|300772583|ref|ZP_07082453.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300760886|gb|EFK57712.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 454

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 30/330 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI 74
           N + +Y+H PFC   C YC  N+ + +    ++ +I + L E    +QL    +  IS I
Sbjct: 53  NGVSIYIHLPFCEDLCTYCGCNTRITKNHKVEDPYITAVLKEWAMYKQLLEDTAVKISEI 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+  +P N+  ++ GI    T + +   + EA+P++   ++ +   + G  R+S
Sbjct: 113 HLGGGTPTFFQPANLERLITGILDGNTCAEDASFSFEAHPANTTESHLKTLYRLGFRRLS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q  + +    + R     +    +  AR I +  ++FDLIY LP QT +     + +
Sbjct: 173 LGIQDFDAKVQFVINRLQTVEDVERVVAQARAIGYTSINFDLIYGLPFQTESTITETIDK 232

Query: 194 ALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL- 248
           AL    D +S Y       I+ G       +  ++ LP     + LY L + +    G  
Sbjct: 233 ALEMQPDRISFYSYAHVPWIKPG-----QRRFTEMDLPEGESKLRLYKLGKQMIGQEGYE 287

Query: 249 -----HAYEISNHSFLGAES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAIS 296
                H     +  FL + +  LH  N+  Y D      IG+G  + S    G  +   +
Sbjct: 288 DVGMDHFARPDDELFLASRAGRLHR-NFMGYADRYTPLMIGLGVSSISDAWTGFAQNVKT 346

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           +E+    + +++ +    VV+   L+ E +
Sbjct: 347 VEE----YHRLIAEGKLPVVKGHLLTGEDE 372


>gi|307257007|ref|ZP_07538783.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864491|gb|EFM96398.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 455

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|223938330|ref|ZP_03630225.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
 gi|223893044|gb|EEF59510.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
          Length = 444

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 9/277 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Q  N+L +YVH PFC  +C +C+  +     +   + ++ +   +   +R      + + 
Sbjct: 47  QQCNALFLYVHVPFCEMRCGFCNLFTTTNPNQTLIDGYLAALQRQASVVRDALHNPAFAR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNR 132
           + FGGGTP+ +EP  + ++   + +     S ++  ++E +P++            GV+R
Sbjct: 107 LAFGGGTPTFLEPAELEILFAVVEEIMGADSRSLPFSVETSPATATCERLNLLHDHGVDR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+QS  E  +  +GR+    E   A+   R++ FP ++ DLIY LP QTM  W   L
Sbjct: 167 ISIGIQSFLEHEVAAVGRSQKRQEVETALQNIRSLNFPTLNIDLIYGLPGQTMDSWMESL 226

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL Y  + L LY L +   T   +  +        E++ + +Y   +S   A+G    
Sbjct: 227 SSALQYRPEELFLYPLYVRPLTGLGRKDRHW------EDLRLQMYREARSRLLANGYTQI 280

Query: 252 EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVK 287
            +       A +     Y    D  IG+G GA S  +
Sbjct: 281 SMRMFRAEHAPTAEGPAYCAQEDGMIGLGCGARSYTR 317


>gi|253690584|ref|YP_003019774.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251757162|gb|ACT15238.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 457

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 4/240 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++  +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQQAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLEQEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FAGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+ + F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR  + +   LS++       +LF    K  +  LPS    +D+  L Q+I S
Sbjct: 220 ESFAFTLQRVAALSPHRLSVFNYA-HLPSLFAAQRKIKEADLPSAEQKLDI--LQQTIGS 276


>gi|307245869|ref|ZP_07527954.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306853229|gb|EFM85449.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 455

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|197286714|ref|YP_002152586.1| coproporphyrinogen III oxidase [Proteus mirabilis HI4320]
 gi|194684201|emb|CAR45683.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis HI4320]
          Length = 457

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 8/229 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC K C +C  N  + R+K   + ++     E+    +    R ++ + +GG
Sbjct: 53  LSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRARYFKNRKVTQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++ Q I+ ++  + +++    N E++IE +P  +E++        G NR+S+GVQ
Sbjct: 113 GTPTFLDKQQISRLVALLRQHFHFVENAELSIEIDPREIELDVIDHLHNEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  + +   + +  AR + F   S DLIY LPKQT   +   L++ +  
Sbjct: 173 DFNKEVQQKVNREQDEAFIFSLVARAREVGFHSTSIDLIYGLPKQTKESFAFTLKKVIEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITS 244
           + D LS++        LF      KD DL L  E + +    L ++IT+
Sbjct: 233 SPDRLSVFNYA-HLPNLFAAQRKIKDEDLPLAEEKLEI----LQETITT 276


>gi|32034965|ref|ZP_00135049.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|126208437|ref|YP_001053662.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           L20]
 gi|307254842|ref|ZP_07536668.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259284|ref|ZP_07541013.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|126097229|gb|ABN74057.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306862213|gb|EFM94181.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866651|gb|EFM98510.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 455

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|165976391|ref|YP_001651984.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|307250211|ref|ZP_07532167.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|165876492|gb|ABY69540.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306857740|gb|EFM89840.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 455

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|127514648|ref|YP_001095845.1| coproporphyrinogen III oxidase [Shewanella loihica PV-4]
 gi|126639943|gb|ABO25586.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           loihica PV-4]
          Length = 446

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 1/198 (0%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    SN L +Y+H PFC K C YC  N  + R++   + +I+    E+     L   
Sbjct: 32  TSIANSKSNKLSLYLHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKH 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P+ I  +   + +++ ++   E +IE +P  +E++     ++A
Sbjct: 92  YQVTQIHWGGGTPTFLSPEQILRLSALLREHFNIAEEGEYSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       I  A+ + F   + DLIY LP QT   +
Sbjct: 152 GFNRISVGVQDFNKEVQIAVNREQDEQFIFDLIAKAKAMGFVSTNIDLIYGLPHQTPESF 211

Query: 188 EMELQRALSYAVDHLSLY 205
              +QR L  + D LS++
Sbjct: 212 AETMQRVLDLSPDRLSVF 229


>gi|121535602|ref|ZP_01667409.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305842|gb|EAX46777.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
          Length = 512

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 23/301 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLT--GPRS 70
           Q +  + VY+  P+C  +C YC F +++    +   E F+ +   +++    L       
Sbjct: 178 QAAKLVSVYIGIPYCPSRCLYCSFPAYILPNDRQSVETFLHALARDIEEAALLLEHCRCK 237

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
           + +I+ GGGTP+ +  ++ + +L  +   +   +  E T+EA  P SV        R  G
Sbjct: 238 VQTIYIGGGTPTSLADEDFSRLLRLVTAAFWSDATREFTVEAGRPDSVTDAKIAAMRAYG 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           V R+S+  QS++E++L  +GR H+  + I       R   P ++ D+I  LP +      
Sbjct: 298 VTRVSVNPQSMQEKTLNHIGRKHSVRDIIDIFQKFRRAEIPVINMDIIAGLPGEDAGDMA 357

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++   + A D+L+++ L I++G+L        D+ LP EN    + ++ +   +  GL
Sbjct: 358 ATMKEIAALAPDNLTVHTLAIKRGSLL--KANLADIPLPDENETARMLDVARQYVAKMGL 415

Query: 249 HAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR-VKVGSHRV 293
             Y +    ++   +  N+ Y R G                IGIGP A ++ V  GS R+
Sbjct: 416 KPYYLYRQKYMTG-NFENVGYARPGTECLYNIQIMEERQTIIGIGPAAGTKAVWPGSWRL 474

Query: 294 A 294
           A
Sbjct: 475 A 475


>gi|303238653|ref|ZP_07325186.1| Coproporphyrinogen dehydrogenase [Acetivibrio cellulolyticus CD2]
 gi|302593772|gb|EFL63487.1| Coproporphyrinogen dehydrogenase [Acetivibrio cellulolyticus CD2]
          Length = 503

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 147/295 (49%), Gaps = 32/295 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  +C YC F S+ V++Y+    ++I++   E++ + ++   +   I 
Sbjct: 181 ADMVSIYIGIPFCPTRCLYCSFTSNPVKKYEKMVGSYIKALRKEIKSVGKILADKGLKIQ 240

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVN 131
           SI+ GGGTP+ I+ Q++  +L  I   + +    E T+EA  P S+         ++ VN
Sbjct: 241 SIYIGGGTPTAIDAQHLGELLKEIEDTFCMDDVKEYTLEAGRPDSITEEKLATIARSRVN 300

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  Q++++++L  +GR+H + + I A +LAR + F  ++ D+I  LP + +  +   
Sbjct: 301 RISINPQTMKDETLVRIGRSHTSGDIIEAFNLARELGFDNINMDVIAGLPGEDINDFMYT 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---- 246
           L      A + ++++ +++++ +         DL    E        +T+ + SA+    
Sbjct: 361 LDEIKKLAPESITVHTMSVKRASRLNDEKNSYDLTDEDE--------VTKMVDSAYEFIK 412

Query: 247 --GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV 286
             GL  Y            E   +S  GAES++N+         I +G GA +++
Sbjct: 413 DIGLKPYYLYRQKNILGNLENIGYSKPGAESIYNIQIMEERQTIIALGAGATTKL 467


>gi|15603698|ref|NP_246772.1| coproporphyrinogen III oxidase [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12722258|gb|AAK03917.1| HemN [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 459

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R  + + +GG
Sbjct: 55  LSLYVHIPFCHKLCYFCACNKTITRHQHKADIYLDFLEREIEHRAPLFKDRIATQVHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q  A ++  + K++T++ + EI+IE +P  +E+N     R+ G NR+S+GVQ
Sbjct: 115 GTPTYLTEQQSARLMAMLRKHFTIAPDAEISIEMDPREIELNMLDHLRRIGFNRMSMGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +   + + R  +     A +  AR + F   + DLIY LP Q +  +   LQ+ ++ 
Sbjct: 175 DFNKDVQKAINRVQDEDFIEALLKRARELGFQSTNLDLIYGLPLQNVDSFMFTLQKVIAL 234

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 235 NPDRLSVF 242


>gi|229527142|ref|ZP_04416536.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           12129(1)]
 gi|229335373|gb|EEO00856.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           12129(1)]
          Length = 480

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+ + F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQ 240
           T   +   LQ+ L+     LS++        LF      K  DL    E +A+    L Q
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQRKIKGADLPAAEEKLAI----LQQ 295

Query: 241 SITSAHGLHAYEISNHSFLGAE 262
           +IT+  G      + + F+G +
Sbjct: 296 TITTLTG------AGYQFIGMD 311


>gi|238928178|ref|ZP_04659938.1| possible coproporphyrinogen III oxidase [Selenomonas flueggei ATCC
           43531]
 gi|238884138|gb|EEQ47776.1| possible coproporphyrinogen III oxidase [Selenomonas flueggei ATCC
           43531]
          Length = 549

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 11/224 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           T   ++   VY+H PFC KKC YC F  +  R +    +++   L E+            
Sbjct: 65  TPNPADERAVYIHIPFCDKKCSYCGFFQNFTREEAAH-HYVDVLLDELDAAADTPYVQGA 123

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++FFGGGTP+ +   +IA ++  +     ++S+ EIT+E     +  +  +    AG
Sbjct: 124 PFQAVFFGGGTPTALSDADIARLVQAVRARLPLTSDCEITLEGRIHDLTESKVEAAMNAG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----FDLIYALPKQTMT 185
           +NR SLGVQS + +  + +GR  +    IA +   R +  R       DLIY LP Q+M 
Sbjct: 184 INRFSLGVQSFDTRVRQAIGRIDDGETVIATL---RRMVERQGAVVIADLIYGLPYQSME 240

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPS 228
            WE +++      +    LYQL +   +   +    GDL +LP+
Sbjct: 241 VWENDVRTQFEIGIAGGDLYQLNVFPSSELARRVASGDLPMLPT 284


>gi|170724423|ref|YP_001758449.1| coproporphyrinogen III oxidase [Shewanella woodyi ATCC 51908]
 gi|169809770|gb|ACA84354.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
          Length = 446

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 3/239 (1%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L   
Sbjct: 32  TSIANSKSDKLSLYLHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKN 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P  I  +   I +++ V+   E +IE +P  +E++     ++A
Sbjct: 92  YLVTQIHWGGGTPTFLSPDQILKLSSLIKEHFNVADKGEYSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+ + F   + DLIY LP QT   +
Sbjct: 152 GFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETF 211

Query: 188 EMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +QR L    D LS++    +       +  KD DL  P + + + L+   +++T A
Sbjct: 212 AETMQRVLDLDPDRLSVFNYAHLPARFAAQRKIKDEDLASPQQKLDM-LHQTIETLTGA 269


>gi|194335858|ref|YP_002017652.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308335|gb|ACF43035.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 472

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 3/236 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +  ++++ L E Q +     G  ++  +
Sbjct: 49  TTGISLYIHIPYCENHCYFCGCNAHRTQDHSYEAPYLEALLKEWQMYTDVFPGRLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DGI KN     N   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFFSPENLVTLIDGICKNVNKMDNYMFSFETNPRSTSKEHLEALYSVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       + +AR I F  ++FDL+Y LPKQTM      +Q+
Sbjct: 169 FGIQDFDPIVQEEINRLQSFELVKEKVDIARQIGFTSINFDLVYGLPKQTMATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +    D L+ Y        ++    K  +  LP  +   +LY+   ++  + G H
Sbjct: 229 VMELKPDRLAFYAYG-HNPHMYEGQRKFKESDLPVGDAKQELYDKGSAMLESIGYH 283


>gi|227113282|ref|ZP_03826938.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 457

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 4/240 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++  +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQQAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FVGRTVTQLHWGGGTPTYLNKVQISRLMSLLREQFSFSDQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+ + F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR    +   LS++       +LF    K  +  LPS    +D+  L Q+I S
Sbjct: 220 ESFAFTLQRVAELSPHRLSVFNYA-HLPSLFAAQRKIKEADLPSAEQKLDI--LQQTIGS 276


>gi|294792263|ref|ZP_06757411.1| HutW protein [Veillonella sp. 6_1_27]
 gi|294457493|gb|EFG25855.1| HutW protein [Veillonella sp. 6_1_27]
          Length = 546

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 10/210 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFF 76
            Y+H PFC  KC YC F  +     V ++ +I   ++E++   +   PR     I ++F 
Sbjct: 71  AYIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASER--PRLKDGLIHAVFI 127

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P N   +L  I +   ++++ E+T+E     +   N + +   GVNR+S+G
Sbjct: 128 GGGTPTSLSPTNSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIG 187

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRA 194
           VQS   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   
Sbjct: 188 VQSFNTEVRQMVGR-LDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADL 246

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +S  VD   LYQL +  G+   K  ++G +
Sbjct: 247 VSSGVDGADLYQLNVFDGSDLNKDIENGKV 276


>gi|237807216|ref|YP_002891656.1| coproporphyrinogen III oxidase [Tolumonas auensis DSM 9187]
 gi|237499477|gb|ACQ92070.1| oxygen-independent coproporphyrinogen III oxidase [Tolumonas
           auensis DSM 9187]
          Length = 457

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 2/211 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C YC  N  V R +   E ++     E++   +L   R+++ + +GG
Sbjct: 53  LSLYVHIPFCHKLCYYCACNKIVTRQRHKAEEYLGYLEKEIRQQAKLFAGRAVTQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + IA ++  +  N+  +   E +IE +P  + ++     ++AG NRISLGVQ
Sbjct: 113 GTPTYLSHEQIARLMTMLKTNFNFAEEGEFSIEIDPREITLDTLDVLKQAGFNRISLGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             +++    + R  +     A I  A+ + F   + DLIY LP QT   +   L++    
Sbjct: 173 DFDKRVQEVVNREQDNDFIRAMIRHAKELGFRSTNLDLIYGLPLQTRESFRHTLEQIAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             D LS++       + F   HK  + +LPS
Sbjct: 233 QPDRLSVFNYA-HLPSRFAGQHKIKEELLPS 262


>gi|222630732|gb|EEE62864.1| hypothetical protein OsJ_17667 [Oryza sativa Japonica Group]
          Length = 263

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 2/150 (1%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPSL+ P+ +A +LD +   + +S++ E++IE +P + +    +     GV
Sbjct: 82  LETVFFGGGTPSLVPPRLVAAVLDALRTRFGLSASPEVSIEMDPGTFDAAKLRELVGLGV 141

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWE 188
           NR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT   WE
Sbjct: 142 NRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEMWE 201

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             L+  +     H+S+Y L IE+GT F ++
Sbjct: 202 ESLRCTVDARPTHVSVYDLQIEQGTKFGQL 231


>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
 gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
          Length = 470

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 15/302 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G  +  + +Y H PFC   C YC  N  + + K   + ++     E+    + L G   +
Sbjct: 59  GACARGVSLYAHIPFCNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQL 118

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + FGGGTP+ +    +  ++  I +++ +  + E +IE +P  V  +N +     G N
Sbjct: 119 AQLHFGGGTPTFLSDAQMTRLMQAIGRHFQLVPHGEYSIEIDPRKVTADNVKHLASLGFN 178

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQ  + Q    + R  +  E  A I  AR + F  +S DLIY LP QT+   +  
Sbjct: 179 RMSVGVQDFDPQVQAAVNRIQSLEETRAVIDAARASGFKSVSIDLIYGLPHQTLESVQTT 238

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSAH--- 246
           L+  L    D L+ Y       TLF    +  +  LPS +  +D+  +  Q++T A    
Sbjct: 239 LETVLEIRPDRLAFYNYA-HLPTLFMPQRRINEADLPSPSAKLDILQMAVQTLTDAGYVF 297

Query: 247 -GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
            G+  + + +     A     L  N+  Y      D I IG  +  +V    H+    IE
Sbjct: 298 IGMDHFALPDDDLAVALRQGRLQRNFQGYSTHADHDLIAIGVSSIGKVGASYHQNEKDIE 357

Query: 299 KH 300
           ++
Sbjct: 358 RY 359


>gi|170718942|ref|YP_001784109.1| coproporphyrinogen III oxidase [Haemophilus somnus 2336]
 gi|168827071|gb|ACA32442.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           somnus 2336]
          Length = 455

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++   T   +  L +YVH PFC K C +C  N  + R++   E ++     E+Q    L 
Sbjct: 39  FQQAATRYPTRPLSLYVHIPFCHKLCYFCACNKTITRHQHKVEIYLDYLEKEIQTRAPLF 98

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  + I +GGGTP+ +  Q  A ++  + +N+T+S   EI+IE +P  +E++      
Sbjct: 99  RHRIATQIHWGGGTPTYLSEQQSARLMQMLKENFTISDKAEISIEMDPREIELSMLDHLY 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           K G NRIS+GVQ   +   + + R  +       +  AR + F   + DLIY LP QT+ 
Sbjct: 159 KIGFNRISMGVQDFNKDVQKAVNREQDEEFVRELLIRARELGFRSTNLDLIYGLPFQTVE 218

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +   L + +    D LS++
Sbjct: 219 SFMFTLHKVIELNPDRLSVF 238


>gi|303230274|ref|ZP_07317041.1| radical SAM domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515057|gb|EFL57032.1| radical SAM domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 546

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 10/199 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFF 76
            Y+H PFC  KC YC F  +     + ++N+I   + E++   +   PR     I ++F 
Sbjct: 71  AYIHIPFCKTKCTYCGFFQNGTSQSI-EDNYIDGLIGELKLASE--SPRLKDGLIHAVFI 127

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P N   +L  I +   ++++ E+T+E     +   N + +   GVNR+S+G
Sbjct: 128 GGGTPTSLSPANSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLEVWMNNGVNRMSIG 187

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRA 194
           +QS   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   
Sbjct: 188 IQSFNTKVRQMVGR-LDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMDVWEQDLADL 246

Query: 195 LSYAVDHLSLYQLTIEKGT 213
           +S  VD   LYQL +  G+
Sbjct: 247 VSSGVDGADLYQLNVFDGS 265


>gi|113460617|ref|YP_718683.1| coproporphyrinogen III oxidase [Haemophilus somnus 129PT]
 gi|112822660|gb|ABI24749.1| coproporphyrinogen III oxidase, anaerobic [Haemophilus somnus
           129PT]
          Length = 455

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++   T   +  L +YVH PFC K C +C  N  + R++   E ++     E+Q    L 
Sbjct: 39  FQQAATRYPTRPLSLYVHIPFCHKLCYFCACNKTITRHQHKVEIYLDYLEKEIQTRAPLF 98

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  + I +GGGTP+ +  Q  A ++  + +N+T+S   EI+IE +P  +E++      
Sbjct: 99  RHRIATQIHWGGGTPTYLSEQQSARLMQMLKENFTISDKAEISIEMDPREIELSMLDHLY 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           K G NRIS+GVQ   +   + + R  +       +  AR + F   + DLIY LP QT+ 
Sbjct: 159 KIGFNRISMGVQDFNKDVQKAVNREQDEEFVRELLIRARELGFRSTNLDLIYGLPFQTVE 218

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +   L + +    D LS++
Sbjct: 219 SFMFTLHKVIELNPDRLSVF 238


>gi|303251100|ref|ZP_07337286.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252598|ref|ZP_07534492.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650110|gb|EFL80280.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859920|gb|EFM91939.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 455

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKALGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|153810163|ref|ZP_01962831.1| hypothetical protein RUMOBE_00544 [Ruminococcus obeum ATCC 29174]
 gi|149833342|gb|EDM88423.1| hypothetical protein RUMOBE_00544 [Ruminococcus obeum ATCC 29174]
          Length = 516

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 105/202 (51%), Gaps = 5/202 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISS 73
           N   +YV  PFC   C YC F+S+ ++++K     ++++   E++ +  +     R + +
Sbjct: 192 NGYSLYVGIPFCPSICLYCSFSSYPLKQWKNRVNQYLEALCKEIKEVAAIMKAKGRKLDT 251

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ +EP+ + ++LD + +N+   +  E TIEA  P S+        R   + R
Sbjct: 252 VYIGGGTPTTLEPEQLKVLLDALMENFCCENLAEFTIEAGRPDSITREKLMMIRNYPITR 311

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  Q++ +++L  +GR H   E   A  LAR   F  ++ DLI  LP +     E  L
Sbjct: 312 ISVNPQTMNQETLDIIGRRHTVEETKQAFMLARECGFDNINMDLIVGLPGEDKIMVENTL 371

Query: 192 QRALSYAVDHLSLYQLTIEKGT 213
               + A D ++++ L +++  
Sbjct: 372 NEVKALAPDSITVHSLAVKRAA 393


>gi|222151807|ref|YP_002560965.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
 gi|222120934|dbj|BAH18269.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
          Length = 489

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 159/335 (47%), Gaps = 36/335 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSISS 73
           + +Y+  PFC  KC YC F ++ ++ +K     F+   L E++    W++       ++S
Sbjct: 162 VSIYIGIPFCPTKCAYCTFPAYAIQVHKNDVPEFLVGLLYEIEHIGEWLK--AHDIKVTS 219

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           I+FGGGTP+ I  Q++ L+L+ +  ++ ++   E+T+EA  P +++    +      +NR
Sbjct: 220 IYFGGGTPTSISAQDLKLLLEAVYTHFDMTHVRELTVEAGRPDTIDEATLEVLNSFDINR 279

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  QS  +++L+ +GR+H+  E I    L+R      ++ DLI  LP +T  +    L
Sbjct: 280 ISINPQSFTDETLKAIGRHHSVQETIDKFKLSREYHMNNINMDLIIGLPNETRKEVIHSL 339

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   + L+++ L+ +  +   +        + + +  + + NLT++    H    Y
Sbjct: 340 NETKKLNPESLTVHTLSFKTASEMTR--NKSKYPVAARDEIIYMMNLTKTFAEQHDYIPY 397

Query: 252 EI-SNHSFLGAESLHNLNYWRYGD--------------YIGIGPGAHSRVKVGSHRVAIS 296
            +    + LG  +L N+ Y + G+               IGIG GA S++    H     
Sbjct: 398 YLYRQKNILG--NLENIGYSKAGEASLYNILIMEEVQTIIGIGCGASSKL---IHPETGK 452

Query: 297 IE-----KHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           IE     K P+S+ K  +   H  ++K  L  +Q+
Sbjct: 453 IENYLNPKDPKSYNKTYKDYTHQKIDKLNLLYDQK 487


>gi|119356450|ref|YP_911094.1| coproporphyrinogen III oxidase [Chlorobium phaeobacteroides DSM
           266]
 gi|119353799|gb|ABL64670.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 472

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 177/388 (45%), Gaps = 19/388 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           S  + +Y+H PFC   C +C  N+H  +    +  ++ + L E Q ++    G  ++  +
Sbjct: 49  STGISLYIHIPFCENYCYFCGCNAHRTQDHSFEAPYLDALLKEWQMYLDVFPGTLNVKEM 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DG+ K+     +   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFFSPENLIKLVDGLYKHVNTMDDYIFSFETNPRSTSREHLEALYSVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 169 FGIQDFDPIVQQEINRPQSFELVREKVELAREIGFTSLNFDLVYGLPKQTLATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +V  +LY+  +++  + G H  EI
Sbjct: 229 VMELKPDRLAFYAYG-HNPHMYEGQRKFKESDLPVGDVKQELYDKGRAMLESIGYH--EI 285

Query: 254 S-NHSFLGAESLHNL--NYWRYGDYIGIGPG-AHSRVKVGSHRVAISI------EKHPES 303
             +H  +  ++L+    N   + +++G         + +G+  ++ +       E+H ++
Sbjct: 286 GMDHFAIEGDALYEAAKNGTLHRNFMGYTENTTQMMLALGASSISDTWYAFAQNERHDDA 345

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--N 361
           ++K V +    ++    L+ E       ++ L  ++  S +D ++     LDI   R  +
Sbjct: 346 YIKAVNEGRFPLLRGHLLTDEDLVLRRHILNLMCKQETSWEDPKLYCDE-LDIARYRLED 404

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           ++  G +  ++   +R T  G+  L ++
Sbjct: 405 MESDGMVVLLEHG-VRVTDVGIPFLRNI 431


>gi|294794125|ref|ZP_06759262.1| HutW protein [Veillonella sp. 3_1_44]
 gi|294455695|gb|EFG24067.1| HutW protein [Veillonella sp. 3_1_44]
          Length = 546

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 6/208 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
            Y+H PFC  KC YC F  +     V ++ +I   ++E++   + +  +   I ++F GG
Sbjct: 71  AYIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASERSRLKDGLIHAVFIGG 129

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P N   +L  I     ++++ E+T+E     +   N + +   GVNR+S+GVQ
Sbjct: 130 GTPTSLSPTNSERLLKAIKAYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIGVQ 189

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALS 196
           S   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   +S
Sbjct: 190 SFNTEVRQMVGR-LDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADLVS 248

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             VD   LYQL +  G+   K   +G +
Sbjct: 249 SGVDGADLYQLNVFDGSDLNKDITNGKV 276


>gi|52424283|ref|YP_087420.1| coproporphyrinogen III oxidase [Mannheimia succiniciproducens
           MBEL55E]
 gi|52306335|gb|AAU36835.1| HemN protein [Mannheimia succiniciproducens MBEL55E]
          Length = 460

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++   +L   RS++ I +GG
Sbjct: 56  LSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDYLEQEIKHRAELFKTRSVTQIHWGG 115

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +     A ++  +  +++++ + EI+IE +P  +E++     RK G NRIS+GVQ
Sbjct: 116 GTPTYLSEAQSARLMTMLRNHFSIADSAEISIEMDPREIELSMLDHLRKIGFNRISMGVQ 175

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +   + + R  +     A +  AR + F   + DLIY LP Q +  +   LQ+ +  
Sbjct: 176 DFNKDVQKAVNREQDEEFIKALLVHARELGFRSTNLDLIYGLPLQNVESFMFTLQKVIEL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D LS++       + F    K  D +LP+    + +   T     A G
Sbjct: 236 NPDRLSVFNYA-HLPSRFAGQAKIKDHMLPAPETKLTILQKTIETLGAAG 284


>gi|197121559|ref|YP_002133510.1| coproporphyrinogen III oxidase [Anaeromyxobacter sp. K]
 gi|196171408|gb|ACG72381.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. K]
          Length = 458

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 2/194 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           Q    L +YVH PFC + C +C  N      +   + ++     E+  +  +L   R+ S
Sbjct: 47  QQGGPLSIYVHLPFCREMCRFCGCNVVATHDRTRADAYLDVLEKEVALVAAKLPDRRAAS 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+ ++ + +    D +A+++T +S+VE  IE +P+    +  +   K G NR
Sbjct: 107 QLHWGGGTPTFLDEKQLVRCHDILARHFTFTSDVEKAIEIDPAITTRSQIEVLAKLGFNR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+GVQ  + +    +GR     E    +  AR N F  ++ DLIY LP QT   W+  L
Sbjct: 167 ISMGVQDFDARVQEVVGRIQGEKETADLVQAARDNGFKGVNLDLIYGLPYQTPDTWKKTL 226

Query: 192 QRALSYAVDHLSLY 205
           +R L+   D ++++
Sbjct: 227 ERILAIHPDRMAVF 240


>gi|308069386|ref|YP_003870991.1| coproporphyrinogen III oxidase [Paenibacillus polymyxa E681]
 gi|305858665|gb|ADM70453.1| Coproporphyrinogen III oxidase [Paenibacillus polymyxa E681]
          Length = 472

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 166/381 (43%), Gaps = 21/381 (5%)

Query: 21  VYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  +C +C+ F    +R  V +E ++ +   + +    + G R  S    GGG
Sbjct: 82  LYMHIPFCAARCGFCNLFTLPDKRLDVHKE-YVDALERQAKQWAPIMGRRPFSRFAIGGG 140

Query: 80  TPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+L+E   +  + D IA+N          I++E +P +V  +  +  ++ G +R+S+G+
Sbjct: 141 TPTLLEAPLVERLFD-IAENMMGLDPKQASISVETSPDTVTEDRLEVLKRRGTDRVSMGI 199

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E     + R         A+  L    FP ++ DLIY LP QT+  W   L+ ALS
Sbjct: 200 QSFVESESAAIYRPQKPKLVREALERLVEYNFPLLNVDLIYGLPGQTVETWLYSLEEALS 259

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y+   + LY L I + T+    +   D      ++ + LY + +      G   Y  S  
Sbjct: 260 YSPGEIFLYPLYIRENTILKPGYTGLD-----HDIRLTLYEVARERLKQAGYVQY--SMR 312

Query: 257 SFLGAESLHNLNYWRYG----DYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRK 310
            F   + + +     Y        G+G GA S  +   +  R  +S           V  
Sbjct: 313 RFAKNDGISSKELLPYSCQEEGMAGLGCGARSYTRNAHYASRYGVSAAATRSIIADYVAA 372

Query: 311 NGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFI 368
             H + +  F L+ ++    F++  L  REG+ +  +    G +L D     +L  +  +
Sbjct: 373 ERHDLADYGFILNVDESKRRFILKALLHREGLELSTYAERFGVSLSDDFTGMSLLLESGM 432

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
             V+   LR T+ GM   D++
Sbjct: 433 AVVEEGTLRLTEEGMAYSDAI 453


>gi|282850632|ref|ZP_06260011.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282580125|gb|EFB85529.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 546

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 10/210 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFF 76
            Y+H PFC  KC YC F  +     V ++ +I   ++E++   +   PR     I ++F 
Sbjct: 71  AYIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASER--PRLKDGLIHAVFI 127

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P N   +L  I +   ++++ E+T+E     +   N + +   GVNR+S+G
Sbjct: 128 GGGTPTSLSPTNSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIG 187

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRA 194
           VQS   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   
Sbjct: 188 VQSFNTEVRQMVGR-LDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADL 246

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +S  VD   LYQL +  G+   K   +G +
Sbjct: 247 VSSGVDGADLYQLNVFDGSDLNKDITNGKV 276


>gi|269798395|ref|YP_003312295.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269095024|gb|ACZ25015.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 546

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 6/208 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
            Y+H PFC  KC YC F  +     V ++ +I   ++E++   + +  +   I ++F GG
Sbjct: 71  AYIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASERSRLKDGLIHAVFIGG 129

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P N   +L  I     ++++ E+T+E     +   N + +   GVNR+S+GVQ
Sbjct: 130 GTPTSLSPTNSERLLKAIKAYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIGVQ 189

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALS 196
           S   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   +S
Sbjct: 190 SFNTEVRQMVGR-LDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADLVS 248

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             VD   LYQL +  G+   K   +G +
Sbjct: 249 SGVDGADLYQLNVFDGSDLNKDITNGKV 276


>gi|313894896|ref|ZP_07828456.1| coproporphyrinogen dehydrogenase HemZ [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312976577|gb|EFR42032.1| coproporphyrinogen dehydrogenase HemZ [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 502

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 27/293 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------ 69
           + ++ VYV  PFC+ +C YC F +++    +  E  ++ F+  +                
Sbjct: 170 ARTVSVYVGIPFCITRCLYCSFPANI----LPGEEKLRGFMRVLARDIAAAAADVAALGL 225

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
           ++ +I+ GGGTP+ +     A +L+ +   +  SS VE T+EA  P S+        +K 
Sbjct: 226 TVQNIYVGGGTPTSLPNDFFAEMLEMVYNAFYGSSIVEFTVEAGRPDSMSAEKISCMKKH 285

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
            V R+S+  QS++E++LR +GR H   E +  +H  R  +   ++ D+I  LP +T    
Sbjct: 286 CVTRVSVNPQSMQERTLRRIGRRHTPEEVVRMLHDLRAAYEVHINMDVILGLPGETAEDV 345

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              + +  + A D ++L+ L I++G+   +M ++  + LPS    + +           G
Sbjct: 346 VSTMAQVTALAPDDITLHALAIKRGSQLRRMMEETHVALPSGEETMRMSAAATDAVRRAG 405

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRV 286
              Y +    ++  + L N+ Y R G                IGIG  A ++V
Sbjct: 406 YRPYYLYRQGYMSGD-LENVGYARPGAESMYNVQIMEEQQTIIGIGGAATTKV 457


>gi|303253558|ref|ZP_07339696.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247959|ref|ZP_07529990.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302647478|gb|EFL77696.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855513|gb|EFM87685.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 455

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS   EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSVEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|291549194|emb|CBL25456.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Ruminococcus torques L2-14]
          Length = 476

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 3/203 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y   PFC   C YC F+S  +  +K   + ++ + + E++   +L   +++ ++
Sbjct: 148 KNGYSLYAGIPFCPSICSYCSFSSSPIAEWKDQVDRYLDAMIKELKATAKLMQGKTLDTV 207

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  I +N+ +   +E T+EA  P S+     +  RK  V RI
Sbjct: 208 YIGGGTPTTLEADQLDRLLGTIRENFDLEHVLEFTVEAGRPDSITREKLELIRKYPVTRI 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +     HLAR + F  ++ DLI  LP +     +  L+
Sbjct: 268 SVNPQTMQQKTLDLVGRKHTVEDVEQIFHLARELGFDNINMDLIAGLPGEDAADMQDTLE 327

Query: 193 RALSYAVDHLSLYQLTIEKGTLF 215
           +      D L+++ L I++   F
Sbjct: 328 KIEKLHPDSLTVHALAIKRAAKF 350


>gi|299144027|ref|ZP_07037107.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518512|gb|EFI42251.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 460

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 18/210 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH------VRRYKVGQENFIQSFLTEMQWMRQLTGP 68
             NS  +YVH PFC  KC YC F +       +++Y    +  I   + E ++ +    P
Sbjct: 144 NKNSYSIYVHIPFCPSKCSYCSFQTLKLNKDVIKKY---VDKLICDLINESKYFKN--PP 198

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
           RSI   + GGGTP+ I+   +  IL  I K + ++   E T+E   P ++  +     + 
Sbjct: 199 RSI---YIGGGTPTSIDIYYLESILKTILKYYGIAD--EFTVECGRPDTINFDVLNMLKY 253

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             VNRIS+  QS+ E++L  +GRNH  SE   + +LAR + F  ++ DLI  LP++    
Sbjct: 254 NKVNRISINPQSMREKTLDLIGRNHTISEIYNSYNLARKVGFNSINMDLIIGLPQEKYND 313

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            E  + + L    ++++++ L I+ G+  Y
Sbjct: 314 VEYSIDKILELNPENITVHTLAIKNGSEIY 343


>gi|331269253|ref|YP_004395745.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
 gi|329125803|gb|AEB75748.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
          Length = 478

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 115/222 (51%), Gaps = 8/222 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQ 60
           ++  E +   + S ++ +Y+  PFC   C YC F S+    R      E +++    E+ 
Sbjct: 136 IAKAEKSRVNKESKNVSIYIGMPFCPTTCLYCSFASNPIAGRNTNKMVEPYLEKLKEEIN 195

Query: 61  WMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    +  +I  ++FGGGTP+ +  +    I++ + K++  + NV E  IE   P S
Sbjct: 196 IIKEFIEKKDLNIECVYFGGGTPTSVNNEQFESIIEKVYKSFVKNRNVKEFNIECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +        +K  V+RIS+  Q++ E +L+ +GR+H   + I   +LAR I F  ++ D+
Sbjct: 256 INEEKLLTMKKYHVSRISINPQTMNEDTLKLIGRHHTVEDIIEKFNLARKIGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           I  LP +T+   E   +  L    D L+++ ++I++G+  Y+
Sbjct: 316 IVGLPNETLDNIETTCKEILKLNPDSLTVHGMSIKRGSKLYE 357


>gi|160936539|ref|ZP_02083906.1| hypothetical protein CLOBOL_01429 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440330|gb|EDP18075.1| hypothetical protein CLOBOL_01429 [Clostridium bolteae ATCC
           BAA-613]
          Length = 516

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 108/195 (55%), Gaps = 3/195 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F S+ + ++K     ++++   E+++  +    R + +++FGGG
Sbjct: 202 LYVGIPFCPTTCLYCSFTSYPIGKWKGRTGLYLEALFKELEYTARKMEGRPLDTVYFGGG 261

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +++  +L  + + + +S  +E T+EA  P S+ ++  +  R  G+ RIS+  Q
Sbjct: 262 TPTSLSAEDLEALLSRLEQLFDLSRVLEFTVEAGRPDSITMDKLKVLRDHGITRISINPQ 321

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR+H         ++AR + F  ++ DLI  LP++ M      L+   + 
Sbjct: 322 TMNQKTLDLIGRHHTVDMVKDRFYMARELGFDNINMDLIMGLPEENMDDVRRTLEEVKAL 381

Query: 198 AVDHLSLYQLTIEKG 212
           A D L+++ L I++ 
Sbjct: 382 APDSLTVHSLAIKRA 396


>gi|332653669|ref|ZP_08419413.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Ruminococcaceae bacterium D16]
 gi|332516755|gb|EGJ46360.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Ruminococcaceae bacterium D16]
          Length = 502

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 133/261 (50%), Gaps = 14/261 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRS 70
            + + VY+  PFC  +C YC F ++ V R       +++  L E+    + +R+    ++
Sbjct: 175 DDQVSVYIGVPFCPTRCAYCSFVSADVGRTLKLVGPYLEGVLREIAVTGESLRRAG--KT 232

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
           + S++ GGGTP+ +    ++ +L+ + ++  V   VE T+EA  P +++       R+AG
Sbjct: 233 VHSLYVGGGTPTTLSASQLSQLLEAVHRDLPVEHCVEYTVEAGRPDTIDREKLMALREAG 292

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           + RIS+  Q+LE   L+ +GR H+A + + A  LAR + F  ++ DLI  LP+ +   + 
Sbjct: 293 IGRISINPQTLENPVLQAIGRRHSAQDILDAYALAREVGFDSINMDLIAGLPRDSFEGFC 352

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L   L+   ++++++ L ++KG+    M + G   LPS      + + +    S  G 
Sbjct: 353 RSLNGVLALEPENITVHTLALKKGSRL--MEQGG--ALPSGEETARMLDYSLERLSGKGY 408

Query: 249 HAYEISNHSFLGAESLHNLNY 269
             Y +    ++   SL N+ +
Sbjct: 409 LPYYLYRQKYMSG-SLENVGW 428


>gi|86157516|ref|YP_464301.1| coproporphyrinogen III oxidase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774027|gb|ABC80864.1| coproporphyrinogen III oxidase, anaerobic [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 458

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 2/194 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           Q    L +YVH PFC + C +C  N      +   + ++     E+  +  +L   R+ S
Sbjct: 47  QQGGPLSIYVHLPFCREMCRFCGCNVVATHDRTRADAYLDVLEKEVALVAAKLPDRRAAS 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+ ++ + +    D +A+++T +S+VE  IE +P+    +  +   K G NR
Sbjct: 107 QLHWGGGTPTFLDEKQLVRCHDILARHFTFTSDVEKAIEIDPAITTRSQIEVLAKLGFNR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+GVQ  + +    +GR     E    +  AR N F  ++ DLIY LP QT   W+  L
Sbjct: 167 ISMGVQDFDARVQEVVGRIQGEKETADLVQAARDNGFKGVNLDLIYGLPYQTPETWKKTL 226

Query: 192 QRALSYAVDHLSLY 205
           +R L+   D ++++
Sbjct: 227 ERILAIHPDRMAVF 240


>gi|260771619|ref|ZP_05880539.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
 gi|260613396|gb|EEX38595.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
          Length = 462

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 5/230 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC K C YC  N  + R+    + ++     E++    L   R ++ + FGG
Sbjct: 58  VSLYIHIPFCHKLCYYCGCNKIITRHSHKADEYLDVLEHEIRQRAPLLLSRPVTQLHFGG 117

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ ++  +   +    + EI+IE +P  +E++     R  G NRIS+GVQ
Sbjct: 118 GTPTFLTNAQMSRLMTLLRAEFNFQPDAEISIEVDPREIELSVLDHLRSEGFNRISIGVQ 177

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++Q  +++ R  +    +  +  A+ + F   + DLIY LPKQT+  +   LQ+ +  
Sbjct: 178 DFDKQVQQYVNREQDEQFIVDLVARAKQLGFRSTNLDLIYGLPKQTVASFHATLQQVIEM 237

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAVDLYNLTQSITSA 245
               LS++        LF    K     LPS  E +A+ L +   ++T A
Sbjct: 238 RPGRLSVFNYA-HMPELFAAQRKIKSDFLPSIEEKMAI-LQDTISTLTGA 285


>gi|307261447|ref|ZP_07543118.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868842|gb|EFN00648.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 455

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS   EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSVEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|304437511|ref|ZP_07397468.1| HutW protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369488|gb|EFM23156.1| HutW protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 549

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 5/221 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           T   ++   VY+H PFC KKC YC F  +  R +    +++   L E+            
Sbjct: 65  TPNPADERAVYIHIPFCDKKCSYCGFFQNFTREEAAH-HYVDVLLDELDAAADTPYVQGA 123

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++FFGGGTP+ +   +IA ++  +     ++S+ EIT+E     +  +  +    AG
Sbjct: 124 PFQAVFFGGGTPTALSDADIARLVQAVRARLPLTSDCEITLEGRIHDLTESKVEAAMNAG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
           +NR SLGVQS + +  + +GR  +    IA +  +       +  DLIY LP Q+M  WE
Sbjct: 184 INRFSLGVQSFDTRVRQAIGRIDDGETVIATLRRMVEQQGAVVIADLIYGLPYQSMEVWE 243

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPS 228
            +++      +    LYQL +   +   +    GDL +LP+
Sbjct: 244 NDVRTQFEIGIAGGDLYQLNVFPSSELARRVASGDLPMLPT 284


>gi|292670503|ref|ZP_06603929.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292647913|gb|EFF65885.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 551

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 15/222 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ----LTGPRSI 71
           ++   VY+H PFC KKC YC F  +  R +    +++   L E+         +  P   
Sbjct: 69  ADERAVYIHIPFCDKKCSYCGFFQNFTREEAAH-HYVDVLLEELDAAADTPYVMGAP--F 125

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTP+ +   ++  ++  + +   ++S+ EIT+E     +  +  +    AGVN
Sbjct: 126 QAVFFGGGTPTALSEADLVRLVRAVRERLPLTSDCEITLEGRIHDLSESKVEAAMHAGVN 185

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----FDLIYALPKQTMTQW 187
           R SLGVQS + +  + +GR  +    IA +   R +  R       DLIY LP Q+M  W
Sbjct: 186 RFSLGVQSFDTRVRQSIGRIDDRETVIATL---RRMVERQGAVVIADLIYGLPYQSMEVW 242

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPS 228
           E +++      +    LYQL +   +   +  + GDL +LP+
Sbjct: 243 ENDVRTQFEIGIAGGDLYQLNVFPASELARRIESGDLPILPT 284


>gi|167758798|ref|ZP_02430925.1| hypothetical protein CLOSCI_01140 [Clostridium scindens ATCC 35704]
 gi|167663538|gb|EDS07668.1| hypothetical protein CLOSCI_01140 [Clostridium scindens ATCC 35704]
          Length = 468

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 110/201 (54%), Gaps = 3/201 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F+S  +  ++   E+++ +   E++++ Q +  + +++I
Sbjct: 135 DNGYSLYVGIPFCPTVCSYCSFSSGALADWESRVEDYLDALCKELKFIAQKSSLKKLNTI 194

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  I +N++    +E T+EA  P S+     +  R+ GV RI
Sbjct: 195 YIGGGTPTTLTAGQLERLLCCIDENFSREHLLEYTVEAGRPDSITREKLEAIRRHGVTRI 254

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+++++L  +GR H+  + I A  +AR + F  ++ D+I  LP + +   E  L+
Sbjct: 255 SINPQSMQQKTLDAIGRRHSVEQIITAYGMARELGFDNINMDIIAGLPGEDLHDMEDTLR 314

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
           +      D L+++ L I++  
Sbjct: 315 QIGRLMPDSLTVHSLAIKRAA 335


>gi|154505864|ref|ZP_02042602.1| hypothetical protein RUMGNA_03406 [Ruminococcus gnavus ATCC 29149]
 gi|153793882|gb|EDN76302.1| hypothetical protein RUMGNA_03406 [Ruminococcus gnavus ATCC 29149]
          Length = 476

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 3/209 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             +YV  PFC   C YC F+S  +  +K   ++++++   E++ + +    R +++I+ G
Sbjct: 152 FSLYVGIPFCPSICSYCSFSSSPLAEWKDRVDDYLKALCQEIRALGERAEERKLNTIYIG 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+ +E + +  +LD I K+++     E TIEA  P S+     +  R+  V RIS+ 
Sbjct: 212 GGTPTTLEAEQLFELLDTIQKSFSFEYLQEFTIEAGRPDSITREKLEVMRRFPVTRISVN 271

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            Q++++++L  +GR H   +     H AR + F  ++ DLI  LP +T       L +  
Sbjct: 272 PQTMQQKTLDLVGRKHTVQDVKDIFHAARELGFDNINMDLIAGLPGETAEDMRDTLCQIE 331

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             + D L+++ L I++   F +  +  DL
Sbjct: 332 ELSPDSLTVHALAIKRAAKFGQEQRKIDL 360


>gi|251791897|ref|YP_003006617.1| coproporphyrinogen III oxidase [Aggregatibacter aphrophilus NJ8700]
 gi|247533284|gb|ACS96530.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           aphrophilus NJ8700]
          Length = 455

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 2/225 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH PFC K C +C  N  + R++   + ++     E++   +L   R  + + 
Sbjct: 48  ARPLSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDFLEKEIKERSKLFTNRVATQVH 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +  +  A +++ + +++ ++ N E++IE +P  +E++  +  R  G NRIS+
Sbjct: 108 WGGGTPTYLTEEQSARLMNMLREHFNIAENAEVSIEMDPREIELSMLEHLRNIGFNRISM 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   +   + + R  + +   A +  AR + F   + DLIY LP QT+  +   LQ+ 
Sbjct: 168 GVQDFNKDVQKAVNREQDEAFVNALLIRARELGFQSTNLDLIYGLPLQTVESFMFTLQKV 227

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +    D LS++       + F    K  D  LP     +D+   T
Sbjct: 228 IVLNPDRLSIFNYA-HLPSRFAGQAKIKDWQLPKPETKLDILQKT 271


>gi|258592862|emb|CBE69171.1| Putative Oxygen-independent coproporphyrinogen III oxidase (modular
           protein) [NC10 bacterium 'Dutch sediment']
          Length = 817

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 116/234 (49%), Gaps = 8/234 (3%)

Query: 19  LGVYVHWPFCV----KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           L VY+  P+C+    ++C YC F S V + +   +++++   +E +  +       ++ I
Sbjct: 68  LNVYIGTPYCLPTNPERCGYCLFPSEVYQGQTQLDSYLKYLESEGRRYQHFLEDEQLAGI 127

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FGGGT +L  P +   ++  +   + T+   +EIT+E  P           + AG+NRI
Sbjct: 128 YFGGGTSNLYRPDDYHRLMRIVRDVFPTIPPGIEITLEGIPQLFTREKLAAMKAAGINRI 187

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+GVQ L+++ ++  GR   A  A   +     +  R S DLI+  P+QT      +L+ 
Sbjct: 188 SMGVQQLDDEMIKLSGRKQKARHAFQTLQWCEELGLRSSVDLIFGWPQQTTELMLKDLEA 247

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +   + H++ Y+L +   T F +  +D    LPS    +++Y +++    + G
Sbjct: 248 IVGTGIGHITHYELNVAGRTDFARHRRD---ELPSTEQNLEMYRVSKQFLESRG 298


>gi|15895539|ref|NP_348888.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum ATCC
           824]
 gi|15025275|gb|AAK80228.1|AE007728_7 FeS oxidoreductases (HEMK related) YHAV B.subtilis ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|325509687|gb|ADZ21323.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum EA 2018]
          Length = 476

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 160/337 (47%), Gaps = 29/337 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS----HVRRYKVGQENFIQSFLTEM 59
           +S  E        NS+ +Y+  PFC  +C YC F S    H + Y    ++++++ + ++
Sbjct: 134 VSKNEKKFLKSVDNSVSIYLGMPFCPTRCRYCSFISDTISHCKSY---VDDYLKAMMYDI 190

Query: 60  QWMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPS 115
           +        R   I  ++FGGGTP+ +  +    I+  + +++   +NV E T+E   P 
Sbjct: 191 EKTSSYIRQRGLKIGCVYFGGGTPTSVSDEQFETIMKSVYESFIEGNNVKEFTVECGRPD 250

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
           S+        +K  V+RIS+  Q++ +++++ +GR H + + I A ++AR I F  ++ D
Sbjct: 251 SITRKKLLTMKKYKVHRISINPQTMNDETIKSMGRGHTSKDVIDAFNMAREIGFDNINMD 310

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAV 233
           +I  LP + + +        L    + L+++ L++++G+ LF  M +D  +  P+++  V
Sbjct: 311 IIIGLPGENLDKINNTCIEILKLKPESLTIHGLSLKRGSKLFEDMLEDKRIEAPNQDDIV 370

Query: 234 DLYNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           +++    S      +  Y            E   +S  G E ++N+        I I  G
Sbjct: 371 NMFEKAYSCARELNMKPYYMYRQKNMVGNMENVGYSLEGKECIYNIQMIEDSQPI-IAIG 429

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            H   K+   +    IE++P   LK V++  + + EK
Sbjct: 430 CHGVSKI-LFKETNRIERYPN--LKDVKEYINRIEEK 463


>gi|227825158|ref|ZP_03989990.1| coproporphyrinogen III oxidase [Acidaminococcus sp. D21]
 gi|226905657|gb|EEH91575.1| coproporphyrinogen III oxidase [Acidaminococcus sp. D21]
          Length = 468

 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFF 76
            Y+H PFC  KC YC F  +     V ++ ++   L E+   +    PR     I S+F 
Sbjct: 74  AYLHIPFCKTKCLYCGFFQNGTDMSV-EDRYVDHLLMELA--QDADKPRLQSAPIQSVFI 130

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P NI  +L  I K   ++++ E+T+E     +       + + GVNRISLG
Sbjct: 131 GGGTPTSLSPSNIRRLLRAIRKTLPLANDYELTLEGRVHDLVEEKMDVWMEEGVNRISLG 190

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS + +  + +GR     E +  +  L+      +  DL+Y LP QT+  W+ +L   +
Sbjct: 191 VQSFDTKVRQQVGRIDTGEEVMKRLQKLSAYNQCAVIIDLMYGLPDQTLDVWQEDLHHLV 250

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
              VD   LYQL + + +  +K  ++G L
Sbjct: 251 ESGVDGADLYQLDVFENSDLHKRIEEGRL 279


>gi|167746628|ref|ZP_02418755.1| hypothetical protein ANACAC_01339 [Anaerostipes caccae DSM 14662]
 gi|317471456|ref|ZP_07930808.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
 gi|167653588|gb|EDR97717.1| hypothetical protein ANACAC_01339 [Anaerostipes caccae DSM 14662]
 gi|316901071|gb|EFV23033.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
          Length = 479

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 27/323 (8%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N+T +   SL  YV  PFC   C YC F S+ +  Y+   ++++ + + E+ ++ +    
Sbjct: 156 NITYESGYSL--YVGIPFCPSTCLYCSFTSYPISAYREYADHYLDALIREIHYIGEQYRD 213

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
           R + S++ GGGTP+ + P+ +  +   + + +      EIT+EA  P S+         +
Sbjct: 214 REMISLYVGGGTPTTLSPEQLERLFGELKRCFDFGRVREITVEAGRPDSITAEKLSVLSE 273

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GV RIS+  Q++   +LR +GRNH A +   + H AR   F  ++ D I  LP + + +
Sbjct: 274 NGVTRISINPQTMNNDTLRKIGRNHTAEDVADSFHAARKAGFDNINMDTICGLPGEGIRE 333

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK------DGDLVLPSENVAVDL----- 235
            E   +       D ++++ L I++     +M        D +++  ++    DL     
Sbjct: 334 LETTFKALGELEPDSITVHALAIKRSAPLNQMRDQFSCGADDEMIRFAQRACFDLGMEPY 393

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           Y   Q     +    +E +  S    E L+N L      D I  G GA S++ VG  R  
Sbjct: 394 YMYRQKNIPGN----FENTGFSLEEKECLYNILIMEELHDIIAAGAGASSKI-VGGRRNI 448

Query: 295 ISIEKHPESWLKMVRKNGHAVVE 317
             +E      LK VR+    + E
Sbjct: 449 QRVEN-----LKDVRQYTERIEE 466


>gi|119943993|ref|YP_941673.1| coproporphyrinogen III oxidase [Psychromonas ingrahamii 37]
 gi|119862597|gb|ABM02074.1| oxygen-independent coproporphyrinogen III oxidase [Psychromonas
           ingrahamii 37]
          Length = 455

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 148/311 (47%), Gaps = 20/311 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SL +Y+H PFC K C +C  N  + R++   + ++     E++        R +S + +G
Sbjct: 50  SLSLYIHIPFCHKICYFCGCNKIITRHQEKADIYLDYLEKEIKQQALHFKNRHVSQLHWG 109

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P  I  ++  + +N++ + N E++IE +P  +E++        G NR+SLGV
Sbjct: 110 GGTPTFLLPAQITRLMTMLRENFSFNPNAELSIEVDPREIELSTIDHLANEGFNRLSLGV 169

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R+ +    +A +  A+   F   + D+IY LP QT   +   L++ + 
Sbjct: 170 QDFNKEVQKAVNRDQDEDFIVALLKRAKEQGFQSTNLDMIYGLPLQTKQNFAHTLEKVVE 229

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK--DGDLVLPSENVAVDLYN---LTQSITSAHGLHAY 251
                LS++       ++F    K  + D+  P+E + +  Y    LTQ+     G+  +
Sbjct: 230 LDPARLSIFNYA-HMPSIFPAQRKINEDDMPSPAEKLEILQYTIEFLTQAGYQFIGMDHF 288

Query: 252 EISNHSFLGAES---LHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
                    A+    LH  N+  Y      D +G+G  A S++    H  + + +K   +
Sbjct: 289 AKPTDELAIAQQKGVLHR-NFQGYTTQEDADLLGMGVSAISQI---GHSYSQN-QKKLST 343

Query: 304 WLKMVRKNGHA 314
           + K + ++GHA
Sbjct: 344 YYKQIEQSGHA 354


>gi|268316920|ref|YP_003290639.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
 gi|262334454|gb|ACY48251.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
          Length = 458

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
              L +YVH PFC   C YC  +  V         ++     E+  + +   P R +  +
Sbjct: 49  PEPLSLYVHLPFCRTLCYYCGCHMIVTHRPEKIARYLDYLEREIALVSRWVAPDRPVVQL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ + P+ I  ++D + +++  + + EI IEA+P  +   + +  R AG NRIS
Sbjct: 109 HWGGGTPTYLAPEQILALMDLLRRHFRFAPDAEIGIEADPRGLTRAHLEAARTAGFNRIS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ L+    + + R     +       AR + F  +S+DLIY LP Q +TQ+E  +++
Sbjct: 169 FGVQDLDPTVQQAINRVQPYEQVARITRWARELGFESISYDLIYGLPHQHLTQFERTIRQ 228

Query: 194 ALSYAVDHLSLY 205
            +    D +SL+
Sbjct: 229 VIDLGPDRISLF 240


>gi|168179550|ref|ZP_02614214.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|182669538|gb|EDT81514.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
          Length = 476

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    RS  I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRSLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +LR +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLRNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGMKPY 388


>gi|315651811|ref|ZP_07904815.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           saburreum DSM 3986]
 gi|315485941|gb|EFU76319.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           saburreum DSM 3986]
          Length = 474

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 117/221 (52%), Gaps = 7/221 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC  +C YC F S+ +  +K   + ++ +   E+  + ++   + + +I+ GGG
Sbjct: 159 LYIGIPFCPTRCLYCSFTSYSIALWKKETDTYVAALCKELTAVSKMFRGKKLQTIYMGGG 218

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +E   +  ILD +  N+ +S+ +E+T+EA  P S+        + +GVNRIS+  Q
Sbjct: 219 TPTSLEAYQLTEILDTVKTNFDLSNLLELTVEAGRPDSITKEKLIALKASGVNRISVNPQ 278

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++++++L  +GR H   +   +  LAR   F  ++ D I  L  +T++  +    +    
Sbjct: 279 TMQQKTLDLIGRKHTTEDIYNSFRLAREAGFTNINMDFIIGLNGETLSDIKDSFIKVKKL 338

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK----DGDLVLPSENVAVD 234
           A + ++++ L +++       +K    D +L+L   +VA +
Sbjct: 339 APESITIHSLALKRAAGLNTENKREIVDNELMLSMTDVATN 379


>gi|320530171|ref|ZP_08031241.1| radical SAM domain protein [Selenomonas artemidis F0399]
 gi|320137604|gb|EFW29516.1| radical SAM domain protein [Selenomonas artemidis F0399]
          Length = 502

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 27/293 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------ 69
           + ++ VYV  PFC+ +C YC F +++    +  E  ++ F+  +                
Sbjct: 170 ARTVSVYVGIPFCITRCLYCSFPANI----LPGEEKLRGFMCVLARDIAAAAADIAALGL 225

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
           ++ +I+ GGGTP+ +     A +L+ +   +  SS VE T+EA  P S+        +K 
Sbjct: 226 TVQNIYVGGGTPTSLPNDFFAEMLEMVYNAFYGSSIVEFTVEAGRPDSMSAEKISCMKKY 285

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
            V R+S+  QS++E++LR +GR H  +E +  +   R  +   ++ D+I  LP +T    
Sbjct: 286 RVTRVSVNPQSMQERTLRRIGRRHTPAEVVQMLRDLRAAYDVHINMDVILGLPGETAEDV 345

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              + +  + A D ++L+ L I++G+   +M ++  + LPS    + +           G
Sbjct: 346 ASSMAQVTALAPDDITLHALAIKRGSQLRRMMEETHVALPSGEETMRMSAAATDAVRCAG 405

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRV 286
              Y +    ++  + L N+ Y R G                IGIG  A ++V
Sbjct: 406 YRPYYLYRQGYMSGD-LENVGYARPGAESMYNVQIMEEQQTIIGIGGAATTKV 457


>gi|294507403|ref|YP_003571461.1| Oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
 gi|294343731|emb|CBH24509.1| Oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
          Length = 373

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 40/389 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PF     PY D  + V                  +    L     I S++ GGG
Sbjct: 3   GLYVHVPFRAAPRPYDDAYTVVSPTPDASALAAALAREIDRHANSLLEGVPIRSLYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PSL  P+ +A ++  + +    ++  E+T+E +P+          R+ GV R+S+   S
Sbjct: 63  RPSLCRPKTLAPLVRVLGRVVEPTTLDEVTVELHPADASPGYLSHLRRLGVTRLSIEGLS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L  +G  H+A +   +I   R   F + S DL++    Q+   W+  L RA+S  
Sbjct: 123 FVEEDLTAVGAPHSADDLARSIRRVRRAGFRQFSVDLVFGGAGQSRAGWKASLHRAVSLG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HL+L++L              GD    ++ +A  L     +   A G   YE+++ + 
Sbjct: 183 VPHLTLHELDT------------GDAEKRADQLAFAL-----TFLRAKGYVPYELTHFAR 225

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE-----------SWLKM 307
            G  SLH  + + +G  +G+GPGA S         A  +   P            ++++ 
Sbjct: 226 PGHRSLHQEHVYAHGSILGLGPGAES-------FWAPDLPPSPAARRWSNVADLTAYVEG 278

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI---SVKDWEMLAGRNLDIECERNLQR 364
           ++ +   V   E LS+   A E++++ LR + G+   ++ D   L  R+   +  R L+R
Sbjct: 279 LQADAPPVAHDETLSTSALAREYMLLRLRTQAGLDLNALADRYDLRLRDRKADTLRRLRR 338

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +G I      R+  T RG  + D++   L
Sbjct: 339 RGLIHE-DPDRVALTDRGRLLTDAITRRL 366


>gi|194014953|ref|ZP_03053570.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase) [Bacillus
           pumilus ATCC 7061]
 gi|194013979|gb|EDW23544.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase) [Bacillus
           pumilus ATCC 7061]
          Length = 499

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 144/289 (49%), Gaps = 27/289 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++  +   GQ   + +FL  + +  Q  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIK---GQAGRVGTFLFGLHYEMQKIGTWLKEHGIKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +++FGGGTP+ I  + + L+ + + +++    ++ E+T+EA  P ++  +  +   +  +
Sbjct: 229 TVYFGGGTPTSITAEEMDLLYEEMYRSFPDVKHIREVTVEAGRPDTISPDKLEVLNRYHI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H+  E I   HL+R      ++ DLI  LP + + +++ 
Sbjct: 289 DRISINPQSYENETLKAIGRHHSVEETIEKYHLSRQYGMNNINMDLIIGLPGEGLKEFQH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            LQ+      + L+++ L+ ++ +   + +KD   V   E +   + +   + T AH  H
Sbjct: 349 SLQQTEELKPESLTVHTLSFKRASEMTR-NKDKYQVADREEIT-RMMDEAVAWTKAHDYH 406

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
            Y            E   +S  G ESL+N+         IGIG GA S+
Sbjct: 407 PYYLYRQKNILGNLENVGYSLDGQESLYNIIIMEEVQTIIGIGCGAASK 455


>gi|313892909|ref|ZP_07826486.1| radical SAM domain protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442262|gb|EFR60677.1| radical SAM domain protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 546

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 10/203 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFF 76
            Y+H PFC  KC YC F  +     V ++ +I   ++E++   +   PR     I ++F 
Sbjct: 71  AYIHIPFCKTKCTYCGFFQNGTSQNV-EDQYIDGLVSELKLASER--PRLKDGLIHAVFI 127

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P N   +L  I +   ++++ E+T+E     +   N   +   GVNR+S+G
Sbjct: 128 GGGTPTSLSPSNSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLDVWMANGVNRMSIG 187

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRA 194
           VQS   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   
Sbjct: 188 VQSFNTEVRQMVGR-LDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADL 246

Query: 195 LSYAVDHLSLYQLTIEKGTLFYK 217
           +S  VD   LYQL +  G+   K
Sbjct: 247 VSSGVDGADLYQLNVFDGSDLNK 269


>gi|302337649|ref|YP_003802855.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634834|gb|ADK80261.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 424

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 104/196 (53%), Gaps = 4/196 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H P+C   C +C+ N   R +    + + +  + E++W  +    R     +I+FGG
Sbjct: 51  IYIHIPYCDTICEFCNLNRTARGH-TDLDAYTKYLIKEIEWYARYPYIRDGQFDAIYFGG 109

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++++ + ++L+L  +  ++ +S + EIT+E+   ++        ++ GVNR+SLGVQ
Sbjct: 110 GTPTILQTEQLSLVLRALRDSFHLSEDCEITLESTLHNLPAEKSARLQQEGVNRLSLGVQ 169

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +   FLGR  +A  AIA +   R +F   +  D+IY+   Q++ +   +       
Sbjct: 170 TFSSRGRSFLGRTGDAEYAIARLRAIRQLFSGVLGIDIIYSYFDQSLEEVAHDASLCSDL 229

Query: 198 AVDHLSLYQLTIEKGT 213
           ++D  S Y L I  G+
Sbjct: 230 SLDGASFYSLMIHDGS 245


>gi|253578283|ref|ZP_04855555.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850601|gb|EES78559.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 395

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 104/199 (52%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F+S+ ++ ++   + ++++   E++    +   R + +I+
Sbjct: 73  NGYSLYIGIPFCPSICLYCSFSSYPLKVWEKRTDEYVEALCREVRETALMMKGRKLDTIY 132

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ + P  I  +LD + + +      E T+EA  P S+        R+  V RIS
Sbjct: 133 IGGGTPTTLLPHQIRKLLDTVGEAFGYEGLAEFTVEAGRPDSITREKLMAIREYPVTRIS 192

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ +++L  +GR H   +   A HLAR + +  ++ DLI  LP + +   E  L++
Sbjct: 193 VNPQTMNQETLDIIGRRHTVEQTKEAFHLARELGYDNINMDLIVGLPGEDIHMVERTLEQ 252

Query: 194 ALSYAVDHLSLYQLTIEKG 212
               A D ++++ L +++ 
Sbjct: 253 VRELAPDSITVHSLAVKRA 271


>gi|167629916|ref|YP_001680415.1| coproporphyrinogen iii oxidase [Heliobacterium modesticaldum Ice1]
 gi|167592656|gb|ABZ84404.1| coproporphyrinogen iii oxidase [Heliobacterium modesticaldum Ice1]
          Length = 517

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 20/286 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIF 75
           +GVY+  PFC  +C YC F  + V+++K   E F+ S   E++ +        + +  I+
Sbjct: 195 VGVYIGIPFCPTRCLYCSFPGYDVKKFKGWLEPFLDSLRKEIEAVGSALCQAGQQVQHIY 254

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +  + +  +   + ++      VE T+E   P +++ +  Q     GVNR+S
Sbjct: 255 IGGGTPTALSSEQLERLFCWVNRHLRGPETVEFTLEGGRPDTLDRDKLQRAFVGGVNRLS 314

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+   +L+ +GR H   + + A+ LAR I FP ++ D+I  LP +        L R
Sbjct: 315 INPQSMNAATLKRIGRCHRPDDVVEAVELARAIGFPIINMDMIIGLPGENADSVRATLDR 374

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
                 ++L+++ + I++ +    M +     LP+ +    +  +T+S     GL  Y  
Sbjct: 375 IAPLCPENLTVHTMAIKRASRL--MAEREQWSLPAADEVEAMLAVTRSGARDLGLVPYYL 432

Query: 252 ----------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV 286
                     E   ++  G E ++N++       I GIG GA +++
Sbjct: 433 YRQKRILANQENVGYTVPGRECIYNIHVMEERQTIWGIGAGAATKI 478


>gi|225155197|ref|ZP_03723692.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
 gi|224804144|gb|EEG22372.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
          Length = 427

 Score =  106 bits (265), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 2/195 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSI 71
           G   N L +Y H PFC  +C +C  N+ +         ++   + EM +M R++   R +
Sbjct: 19  GAARNPLSLYFHLPFCQARCWFCGCNNIITTRVDAAAEYLDDLVAEMCFMARRIDRERPV 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + +  GGGTP+      +    D + + +T +   EI++E +P  ++      +R  G  
Sbjct: 79  TQLHLGGGTPTFFPADQLTRFADAVHRLFTFAPGAEISVEIDPRHLDAQQVLAFRVLGAR 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R SLGVQ  +      + R    S    A+HL R   F  ++ DLIY LP+QT   +E  
Sbjct: 139 RASLGVQDTDPAVQTAIHRVQPQSVNQRAVHLLREAGFTSINIDLIYGLPRQTPATFERT 198

Query: 191 LQRALSYAVDHLSLY 205
           L   L+ + D LS++
Sbjct: 199 LDDVLALSPDRLSVF 213


>gi|190150287|ref|YP_001968812.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307263628|ref|ZP_07545239.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915418|gb|ACE61670.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871005|gb|EFN02738.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 455

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y H PFC K C +C  N  + R++   + ++     E++    L   R ++ I +GG
Sbjct: 51  LSLYAHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLFTNRVVTQIHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +  G NRIS+G+Q
Sbjct: 111 GTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLKSIGFNRISMGIQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  A+ + F   + DLIY LPKQ +  +   L+R +  
Sbjct: 171 DFNKEVQKLVNREQDEEFIFALMKRAKALGFTSTNIDLIYGLPKQNVESFMYTLERVIEL 230

Query: 198 AVDHLSLY 205
             D +S++
Sbjct: 231 NPDRMSVF 238


>gi|266623549|ref|ZP_06116484.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           hathewayi DSM 13479]
 gi|288864649|gb|EFC96947.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           hathewayi DSM 13479]
          Length = 485

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 125/257 (48%), Gaps = 8/257 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F S  ++ ++   + ++ +   EM ++ +    R++ +++FGGG
Sbjct: 169 LYVGIPFCPTTCLYCSFTSFPIKSWEKRMDEYLTALFKEMDYVAETMAGRTLDTVYFGGG 228

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +++  +++ +   +  S   E T+EA  P S+  +  +     GV RIS+  Q
Sbjct: 229 TPTSLSAEHLERVMEKLKATFDFSEVKEFTVEAGRPDSITEDKLKVLLDYGVTRISINPQ 288

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++++++L  +GR H          LAR + F  ++ DLI  LP++ +      ++   + 
Sbjct: 289 TMKQETLDLIGRRHTVDLVKEKYRLAREMGFDNINMDLIIGLPEEDLEDVRRTMEEIKAL 348

Query: 198 AVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             D ++++ L I++   L     K GDL + +    +D   LT +     G   Y +   
Sbjct: 349 DPDSITVHSLAIKRAARLNMFKEKYGDLKITNTQEMID---LTAAYAREMGQEPYYLYRQ 405

Query: 257 SFLGAESLHNLNYWRYG 273
             + A +  N+ Y R G
Sbjct: 406 KNM-AGNFENVGYSRPG 421


>gi|34762537|ref|ZP_00143534.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887815|gb|EAA24886.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 471

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 28/322 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F++  L E+Q +     T  + +SSI
Sbjct: 148 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEVLLKEIQIVGDFLKTYSKKVSSI 207

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +   +  +K  V+RI
Sbjct: 208 YFGGGTPSTLTEEDLERVLKKLLENIDMADVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++LR + R  N          A+ +   ++ DLI  LP++T  +    L +
Sbjct: 268 SLNPQSFNLETLRRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGLPEETTEEILNTLSQ 327

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
              Y +D+L+++ L  ++ +  +K +++ +++   + V ++ Y   Q I     +  Y  
Sbjct: 328 LKDYDIDNLTIHCLAFKRASKLFKENQERNII---DRVLIEKY--IQKIVEEKTMKPYYM 382

Query: 252 ----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIE-- 298
                     E + +S  G ES+ N+       + + +G G  S++ +        IE  
Sbjct: 383 YRQKNIIEWGENTGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIEERNGIDYIERY 442

Query: 299 ---KHPESWLKMVRKNGHAVVE 317
              K P  +++ + K     +E
Sbjct: 443 VNPKDPALYIRELDKRCKEKIE 464


>gi|255658300|ref|ZP_05403709.1| oxygen-independent coproporphyrinogen III oxidase 2 [Mitsuokella
           multacida DSM 20544]
 gi|260849617|gb|EEX69624.1| oxygen-independent coproporphyrinogen III oxidase 2 [Mitsuokella
           multacida DSM 20544]
          Length = 515

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 137/292 (46%), Gaps = 29/292 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------ 70
            ++ VYV  PFC+ +C YC F S++    +  +  I  F+T ++  + L   +       
Sbjct: 186 KTVSVYVGIPFCLTRCLYCSFPSNI----LPGKKRIAEFMTVLE--KDLLAAKKAIDHYG 239

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
             + +I+ GGGTP+ +  +  A +L+ +   +   S VE T+EA  P S+     +  ++
Sbjct: 240 FRVQNIYVGGGTPTSLPDEAFAEMLNMVYNAFYGPSIVEFTVEAGRPDSITPAKIEMMKR 299

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             V+R+S+  Q+++ ++L  +GR H   + +   H  R    P ++ DLI  LP +T   
Sbjct: 300 LSVSRVSVNPQTMQAKTLHRIGRQHTPEDVVTMFHALREAGIPHINMDLILGLPGETAED 359

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +++  +   D ++L+ L +++G+    + +D  + LPS+     +  +  +     
Sbjct: 360 VRDTMEKVTALGPDDITLHALALKRGSRLRLLMEDQHVELPSDEETRRMSEVAMAYVEKL 419

Query: 247 GLHAYEISNHSFL------------GAESLHNLNYW-RYGDYIGIGPGAHSR 285
           G+  Y +    ++            GAE ++N+     +   IGIG  A ++
Sbjct: 420 GMRPYYLYRQGYMSGDLENVGCCRAGAEGMYNIQIMEEHQTIIGIGGAATTK 471


>gi|238018776|ref|ZP_04599202.1| hypothetical protein VEIDISOL_00634 [Veillonella dispar ATCC 17748]
 gi|237864542|gb|EEP65832.1| hypothetical protein VEIDISOL_00634 [Veillonella dispar ATCC 17748]
          Length = 568

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 10/203 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFF 76
            Y+H PFC  KC YC F  +     V ++ +I   ++E++   +   PR     I ++F 
Sbjct: 93  AYIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLVSELKLASER--PRLKDGLIHAVFI 149

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P N   +L  I +   ++++ E+T+E     +   N   +   GVNR+S+G
Sbjct: 150 GGGTPTSLSPANSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLDVWMANGVNRMSIG 209

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRA 194
           VQS   +  + +GR  +  E +     A   + + S   DLIY LP QTM  WE +L   
Sbjct: 210 VQSFNTEVRQMVGR-LDTRETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADL 268

Query: 195 LSYAVDHLSLYQLTIEKGTLFYK 217
           +S  VD   LYQL +  G+   K
Sbjct: 269 VSSGVDGADLYQLNVFDGSDLNK 291


>gi|310823526|ref|YP_003955884.1| coproporphyrinogen III oxidase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396598|gb|ADO74057.1| Coproporphyrinogen III oxidase family protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 438

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 107/210 (50%), Gaps = 4/210 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++L +Y+H PFC  +C +C+  +     +   E ++ +   E + +++  GP + +    
Sbjct: 45  DALFLYLHVPFCEMRCGFCNLFTAAGPRQDVVEGYLAALGRETRRVKEAIGPATFARAAL 104

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+L++   +  + D +A+    +   N+ +++E +P +  +   Q  R  G +R+S
Sbjct: 105 GGGTPTLLDVAGLHTVFD-LAEGVMGADLRNIPVSVEVSPETASLEKLQALRSRGTDRVS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS  E  +  + R    ++   A+   R + FP ++ DLIY +  QT+  W   L+ 
Sbjct: 164 IGVQSFIEAEVAAVKRPQKTAQVEEALERIRTLDFPTLNIDLIYGMEGQTVESWLFSLRA 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           AL Y+ + + LY L +   T   K  +  D
Sbjct: 224 ALRYSPEEIYLYPLYVRPLTFLGKKGRAWD 253


>gi|220916323|ref|YP_002491627.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954177|gb|ACL64561.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 458

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 2/194 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           Q    L +YVH PFC + C +C  N      +   + ++     E+  +  +L   R+ S
Sbjct: 47  QQGGPLSIYVHLPFCREMCRFCGCNVVATHDRTRADAYLDVLEKEVALVAAKLPDRRAAS 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+ ++ + +    D +A+++T +S+ E  IE +P+    +  +   K G NR
Sbjct: 107 QLHWGGGTPTFLDEKQLVRCHDILARHFTFTSDAEKAIEIDPAITTRSQIEVLAKLGFNR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+GVQ  + +    +GR     E    +  AR N F  ++ DLIY LP QT   W+  L
Sbjct: 167 ISMGVQDFDARVQEVVGRIQGEKETADLVQAARDNGFKGVNLDLIYGLPYQTPDTWKKTL 226

Query: 192 QRALSYAVDHLSLY 205
           +R L+   D ++++
Sbjct: 227 ERILAIHPDRMAVF 240


>gi|260886614|ref|ZP_05897877.1| HutW protein [Selenomonas sputigena ATCC 35185]
 gi|330839552|ref|YP_004414132.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260863757|gb|EEX78257.1| HutW protein [Selenomonas sputigena ATCC 35185]
 gi|329747316|gb|AEC00673.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 541

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 10/221 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N   +       Y+H PFC  KC YC F  +   ++  +++++++ + E++       PR
Sbjct: 62  NTPAKKGEVQAAYIHIPFCKTKCLYCGFFQNAA-HQSAEDDYVEALIEEIE--ASADAPR 118

Query: 70  S----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                I ++F GGGTP+ +  +N A +L  + +   ++++ E+T+E     +     + +
Sbjct: 119 LKGGLIHAVFIGGGTPTSLSAENAARVLSTLRRVLPLANDYELTLEGRIHDLVPEKIEAW 178

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQT 183
              GVNRISLGVQS + +  +  GR  +  E +  + L ++ + + S   DLI+ LP Q+
Sbjct: 179 LANGVNRISLGVQSFDTKVRQSQGRIESREEVLERLKLLKS-YEQCSVVLDLIFGLPGQS 237

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           M  W+ +L   ++  +D    YQL + +G+   K   +G L
Sbjct: 238 MEVWQQDLDDLIASGIDGADFYQLNVFEGSDLNKRIAEGKL 278


>gi|261868750|ref|YP_003256672.1| coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414082|gb|ACX83453.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 455

 Score =  106 bits (264), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E+Q   +L   R  + + +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKLITRHQHKADIYLDFLEREIQVRSKLFADRVTTQVHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +     + ++  +  ++ ++ N EI+IE +P  +E++  +  R  G NRIS+GVQ
Sbjct: 111 GTPTYLTEAQSSRLMQMLRDHFNIADNAEISIEMDPREIELSMLEHLRHIGFNRISMGVQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  +     A +  AR + F   + DLIY LP QT+  +   LQ+ +  
Sbjct: 171 DFNKEVQKAVNREQDEDFVNALLVRARELGFQSTNLDLIYGLPFQTVDGFMFTLQKVIEL 230

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 231 NPDRLSVF 238


>gi|226940122|ref|YP_002795195.1| ChuW [Laribacter hongkongensis HLHK9]
 gi|226715048|gb|ACO74186.1| ChuW [Laribacter hongkongensis HLHK9]
          Length = 452

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 13/256 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLT--EMQWMRQLTGPRSISSIFFG 77
           VYVH PFC   C +C F  +   +  G  E ++   +   E +  R+  G  SI++++ G
Sbjct: 58  VYVHIPFCANHCVFCGF--YRNGWNAGLAEQYVDRLVADIEAEAARRPAG-GSIAAVYLG 114

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+    +  +L  + +   ++ + EIT+E   S  +         AG NR S+GV
Sbjct: 115 GGTPTLLPAGQLTRLLQTLRRCLPLAPDCEITVEGRMSHFDAGKVDACLAAGANRFSIGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +    R LGR H   EA A +  LAR+    +  DLI+ LP QT   W+ +L  ALS
Sbjct: 175 QTFDSAIRRRLGRKHAGDEAAAYLAWLARHSQAVVVTDLIFGLPGQTEAVWQRDLDTALS 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA--VDLYNLTQSITSAHGLHAYEIS 254
             +  + +Y   +       +M + G L  P+  +A     Y L     +A G   +E  
Sbjct: 235 LGLSGIDVYAFNLYPHLPVNRMIEKGALP-PAPGLAEVAAQYGLAHQAFTAAG---WEQL 290

Query: 255 NHSFLGAESLHNLNYW 270
           ++S  GA      N++
Sbjct: 291 SNSHFGAPGRGERNHY 306


>gi|91794973|ref|YP_564624.1| coproporphyrinogen III oxidase [Shewanella denitrificans OS217]
 gi|91716975|gb|ABE56901.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           denitrificans OS217]
          Length = 446

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 3/232 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S +L +Y+H PFC K C YC  N  + R+    + +++   +E+     L     ++ + 
Sbjct: 39  SKTLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYLEYLASEIIKRAPLFKHYQVTQMH 98

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P  I  +   + +++  +S  E +IE +P  +E++     ++AG NRIS+
Sbjct: 99  WGGGTPTFLTPAQILSLTALLKQHFNFASQGEFSIEIDPREIELSMLDTLKEAGFNRISV 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       I  A+++ F   + DLIY LP QT   +   ++R 
Sbjct: 159 GVQDFNKEVQIAVNREQDEQFIFDLIARAKDLGFVSTNVDLIYGLPLQTPASFAKTIKRI 218

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSA 245
           +  + D LS++       + F    K  D  LP+    +D L+   +S+T+A
Sbjct: 219 IELSPDRLSVFNYA-HLPSRFAAQRKIKDEQLPTAQQRLDILHQTIESLTAA 269


>gi|78188266|ref|YP_378604.1| coproporphyrinogen III oxidase [Chlorobium chlorochromatii CaD3]
 gi|78170465|gb|ABB27561.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Chlorobium
           chlorochromatii CaD3]
          Length = 475

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 3/236 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    ++ ++ + L E Q ++    G  ++  +
Sbjct: 49  TTGVSMYIHIPYCENYCYFCGCNAHRTQDHSFEKPYLDALLKEWQMYLDVFPGTLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ + P+N+  ++DG+ K+     N   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFLSPENLTRLVDGLFKHVNRMDNHMFSFETNPKSTTKEHLEALYNVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       I LAR I F  ++FDL+Y LPKQTM      +Q+
Sbjct: 169 FGIQDFDPIVQKEINRLQSFELVKEKIDLARQIGFTSINFDLVYGLPKQTMATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +    D L+ Y        ++    K  +  LP  +   +LY    ++  + G H
Sbjct: 229 VMELRPDRLAFYAYG-HNPHMYEGQKKFNEADLPVGDAKQELYEKGSAMLESIGYH 283


>gi|310642448|ref|YP_003947206.1| coproporphyrinogen iii oxidase family protein [Paenibacillus
           polymyxa SC2]
 gi|309247398|gb|ADO56965.1| Coproporphyrinogen III oxidase family protein [Paenibacillus
           polymyxa SC2]
          Length = 475

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 17/379 (4%)

Query: 21  VYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC  +C +C+ F    +R  V +E ++ +   + +    + G R  S    GGG
Sbjct: 85  LYMHIPFCAARCGFCNLFTLPDKRQDVHKE-YVDALERQARQWAPIMGGRPFSRFAIGGG 143

Query: 80  TPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+L+E   +  + D IA+N          I++E +P +V  +  +  ++ G +R+S+G+
Sbjct: 144 TPTLLEAPLVERLFD-IAENIMGLDPKRASISVETSPDTVTEDRLEVLKRRGTDRVSMGI 202

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E     + R         A+  L    FP ++ DLIY LP QT+  W   L+ ALS
Sbjct: 203 QSFVESESAAIYRPQKPKLVREALERLVEYNFPLLNVDLIYGLPGQTVETWLYSLEEALS 262

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y+   + LY L I + T+    +   D      ++ + LY + +      G   Y +   
Sbjct: 263 YSPGEIFLYPLYIRENTILKPGYTGLD-----HDIRLSLYEVARERLKQAGYVQYSMRRF 317

Query: 257 SF-LGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKNG 312
           +   G  S   L Y  +     G+G GA S  +   +  R  +S           V    
Sbjct: 318 AKNEGTSSKELLPYSCQEEGMAGLGCGARSYTRDVHYASRYGVSTAATRSIIADYVAAER 377

Query: 313 HAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-CERNLQRQGFIER 370
           H + +  F L+++++   F++  L  REG+ +  +    G  L+ +    +L  +  +  
Sbjct: 378 HDLADYGFILNADERKRRFILKALLHREGLELCAYAERFGVCLEDDFTGMSLLLESGMAV 437

Query: 371 VQFSRLRCTQRGMTMLDSV 389
           V+   LR T+ GM   D++
Sbjct: 438 VEEGTLRLTEEGMAYSDAI 456


>gi|255280798|ref|ZP_05345353.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bryantella
           formatexigens DSM 14469]
 gi|255268735|gb|EET61940.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bryantella
           formatexigens DSM 14469]
          Length = 482

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 148/310 (47%), Gaps = 22/310 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +YV  PFC   C YC F +S +  +K   ++++ +   E++    +   +++ +++
Sbjct: 165 NGYSLYVGIPFCPSICLYCSFGSSPLSVWKNRVDDYLDALCREIEQTAHIWQGKTLDTVY 224

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ + P+ +  +L+ + + +  S   E T+EA  P S+     Q  +K  V RIS
Sbjct: 225 IGGGTPTTLSPEQMQRLLEKLEECFDFSHLKEFTVEAGRPDSITAEKLQVLKKHPVTRIS 284

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ + +L  +GR H A++   A  +AR + F  ++ DLI  LP +   + E  +Q+
Sbjct: 285 INPQTMNDGTLEVIGRGHTAAQTKEAFAMARQLGFDNINMDLIVGLPGEGYPEVEYTMQQ 344

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYE 252
             + A D ++++ L +++ T   +++   D   P   V + ++ ++T    +  G   Y 
Sbjct: 345 VTALAPDSITVHSLALKRAT---RLNLFKDKYAPVSFVNSGEIMDMTARYAAQAGQFPYY 401

Query: 253 ISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRVKVGSHRVAISIE 298
           +     + A +  N+ Y R G                + +G GA +++  G     I   
Sbjct: 402 LYRQKNM-AGNFENVGYAREGAAGIYNILIMEEKQSILALGAGASTKIVSGGRIERIENV 460

Query: 299 KHPESWLKMV 308
           K   S+++ +
Sbjct: 461 KDIRSYIERI 470


>gi|258516508|ref|YP_003192730.1| coproporphyrinogen III oxidase [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780213|gb|ACV64107.1| Coproporphyrinogen dehydrogenase [Desulfotomaculum acetoxidans DSM
           771]
          Length = 509

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 141/291 (48%), Gaps = 20/291 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM-RQLT-GPRS 70
           Q   ++ +Y+  PFC  +C YC F ++ V+++K   E ++ + + E++   R L     S
Sbjct: 168 QAEKTVSIYIGIPFCPTRCLYCSFTAYPVKKFKAWVEPYLNALIKEIKETGRALKENGLS 227

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
           + +I+FGGGTP+ I P+ +A +L+           +E+T+E   P ++          AG
Sbjct: 228 VQTIYFGGGTPTSINPEQLASLLNNANSCLRGPQTIEVTMEGGRPDTLTEEVLHICSAAG 287

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V+R+S+  Q++ +Q+L+ +GRNH+  +   A+  AR   FP ++ D+I  LP +  T   
Sbjct: 288 VDRLSINPQTMLDQTLKLIGRNHSVEDIYRAMQSARAAGFPVINMDIIVGLPGENETSVM 347

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++       ++L+++ L ++  +L  +     +  +P+    + ++ + Q      G+
Sbjct: 348 QTIELLKPLKPENLTVHALALKNASLLKQEIAQHN--MPAAKEVLKMWEIAQKGCGDMGM 405

Query: 249 HAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV 286
             Y            E   ++  G E ++N+         IG+G G  S++
Sbjct: 406 LPYYLYRQKRITGNLENIGYALPGKECIYNIQMIEERQTIIGLGTGGSSKL 456


>gi|302874942|ref|YP_003843575.1| Coproporphyrinogen dehydrogenase [Clostridium cellulovorans 743B]
 gi|307690440|ref|ZP_07632886.1| coproporphyrinogen III oxidase [Clostridium cellulovorans 743B]
 gi|302577799|gb|ADL51811.1| Coproporphyrinogen dehydrogenase [Clostridium cellulovorans 743B]
          Length = 476

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 128/255 (50%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++     N +G+Y+  PFC  +C YC F S+ ++  +   + ++++   E+  +
Sbjct: 134 VAKTEISIVNTEKNVIGLYLGMPFCPTRCLYCSFASNPIKTCEKLVKPYLEALSKEISMI 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    +   I +++FGGGTP+ +  +   +IL+ +  N+    NV E T+E   P S+ 
Sbjct: 194 SKYINDKKLKIETVYFGGGTPTAVNNEEFEMILNDVYTNFIKDKNVKEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  ++  V+RIS+  QS+ E++L+ +GR+H   E     HLAR + F  ++ DLI 
Sbjct: 254 EEKLMTMKRYDVSRISINPQSMNEKTLKTIGRHHTIEEVKKKFHLARKLGFTNINMDLII 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLY 236
            LP + + + +           D ++++ L I++G+ L   +  D    +   +  + +Y
Sbjct: 314 GLPNEGVDEVKTTCAELFELKPDSVTVHGLAIKRGSRLQEDLINDKKYSVAKNSNIITMY 373

Query: 237 NLTQSITSAHGLHAY 251
           N  +++ +   +  Y
Sbjct: 374 NEVENLANKLNMRPY 388


>gi|327395813|dbj|BAK13235.1| oxygen-independent coproporphyrinogen III oxidase HemN [Pantoea
           ananatis AJ13355]
          Length = 457

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 2/218 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFC + C +C  N  V R     + ++ +   E+     L   R +S + +G
Sbjct: 52  ALSLYIHIPFCHRLCYFCGCNKIVTRQLHKADRYLNALEQEITARAPLFKGRQVSQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  Q I+ ++  + +++T   + E++IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLNKQQISRLVALLKQHFTFIDDAEMSIEVDPREIELDMIDHLRACGFNRLSMGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     + R  + +   A +  AR   F   S DLIY LP QT   +   LQR ++
Sbjct: 172 QDFNKAVQERVNRVQDEAVIFALMARAREQGFRSTSIDLIYGLPLQTPESFAYTLQRVIA 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
              D LS++        LF    K  +  LPS    +D
Sbjct: 232 LDPDRLSVFNYA-HLPALFSAQRKIKEDELPSAQQKLD 268


>gi|293391534|ref|ZP_06635868.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952068|gb|EFE02187.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 455

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E+Q   +L   R  + + +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCACNKLITRHQHKADIYLDFLEREIQVRSKLFADRVATQVHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +     + ++  +  ++ ++ N EI+IE +P  +E++  +  R  G NRIS+GVQ
Sbjct: 111 GTPTYLTEAQSSRLMQMLRDHFNIADNAEISIEMDPREIELSMLEHLRHIGFNRISMGVQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  + + R  + +   A +  AR + F   + DLIY LP QT+  +   LQ+ +  
Sbjct: 171 DFNKEVQKAVNREQDENFVNALLVRARELGFQSTNLDLIYGLPFQTVDGFMFTLQKVIEL 230

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 231 NPDRLSVF 238


>gi|332665388|ref|YP_004448176.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332334202|gb|AEE51303.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 451

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 160/395 (40%), Gaps = 29/395 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSIS 72
           Q    + +Y+H P+C K C YC  N  + +    ++ +I S L E   +++ L G   I 
Sbjct: 45  QVDRGISLYIHLPYCEKLCTYCGCNKRITKNHGVEQPYIASLLKEWHLYLKNLPGRPLIK 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++  GGGTP+   P  +  ++ GI K+  ++S+V+   EA+PSS    + +     G  R
Sbjct: 105 ALHLGGGTPTFFHPDQLDTLIRGIFKHADIASDVDFGFEAHPSSTTRQHLETLYNLGFRR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+GVQ    + L  + R     E       AR + +  +++DLI+ LP QT       +
Sbjct: 165 ISVGVQDFAPEILEIINRQQTEEEVQQVTEWARELGYTSVNYDLIFGLPLQTPEHIRTTM 224

Query: 192 QRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +      D ++ Y       I+     Y      ++ LP       LY L + +    G
Sbjct: 225 HKLELLRPDRIAFYSYAHVPWIKPSQRAY-----SEVDLPLGPAKRALYELGRDLLEEMG 279

Query: 248 LHAYEIS-NHSFLGAESLHN-----------LNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
               EI  +H  L  + L+            + Y  Y   + I  GA S     S    +
Sbjct: 280 Y--VEIGMDHFALPTDELYKSMKRGTLHRNFMGYTPYDTRLSIALGASSISD--SWDGFV 335

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             EK+ E + K V +    +V+    S E Q     ++ +  R G    D  +      D
Sbjct: 336 QNEKNIEDYQKSVEQGHFPIVKGHLFSEEDQIIRTHILNIMCRYGTDWSDPALQTALFED 395

Query: 356 IECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           I      L+  G IE +    L+ T  G   L ++
Sbjct: 396 IIVRIEELEADGLIE-INGQSLKVTALGRPFLRNI 429


>gi|291619505|ref|YP_003522247.1| HemN [Pantoea ananatis LMG 20103]
 gi|291154535|gb|ADD79119.1| HemN [Pantoea ananatis LMG 20103]
          Length = 459

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 2/218 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFC + C +C  N  V R     + ++ +   E+     L   R +S + +G
Sbjct: 54  ALSLYIHIPFCHRLCYFCGCNKIVTRQLHKADRYLNALEQEITARAPLFKGRQVSQLHWG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  Q I+ ++  + +++T   + E++IE +P  +E++     R  G NR+S+GV
Sbjct: 114 GGTPTFLNKQQISRLVALLKQHFTFIDDAEMSIEVDPREIELDMIDHLRACGFNRLSMGV 173

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     + R  + +   A +  AR   F   S DLIY LP QT   +   LQR ++
Sbjct: 174 QDFNKAVQERVNRVQDEAVIFALMARAREQGFRSTSIDLIYGLPLQTPESFAYTLQRVIA 233

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
              D LS++        LF    K  +  LPS    +D
Sbjct: 234 LDPDRLSVFNYA-HLPALFSAQRKIKEDELPSAQQKLD 270


>gi|227327121|ref|ZP_03831145.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 457

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 4/240 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++  +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQQAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FVGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSDKAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+ + F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR        LS++       +LF    K  +  LPS    +D+  L Q+I S
Sbjct: 220 ESFAFTLQRVAELNPHRLSVFNYA-HLPSLFAAQRKIKEADLPSAEQKLDI--LQQTIGS 276


>gi|153939779|ref|YP_001392334.1| coproporphyrinogen III oxidase [Clostridium botulinum F str.
           Langeland]
 gi|152935675|gb|ABS41173.1| radical SAM domain protein [Clostridium botulinum F str. Langeland]
          Length = 476

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    RS  I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRSLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETETLAKDLGIKPY 388


>gi|119897643|ref|YP_932856.1| coproporphyrinogen III oxidase [Azoarcus sp. BH72]
 gi|119670056|emb|CAL93969.1| coproporphyrinogen oxidase [Azoarcus sp. BH72]
          Length = 463

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRS 70
            G  S  L +Y H PFC   C YC  N  + +       +++    E++  +  L G R 
Sbjct: 51  VGGVSRPLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLKYLEKEIEMQVAALGGSRQ 110

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ +  GGGTP+ +  + +  ++D + + + ++ N E +IE +P  V+ +  +     G 
Sbjct: 111 VTQLHLGGGTPTFLSHEEMHQLMDAVRRFFNLAPNGEYSIEVDPRKVDFDTVEMLANLGF 170

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ   +   R + R  +  E    I  AR   F  +S DLIY LPKQ +  +  
Sbjct: 171 NRMSVGVQDFSDDVQRAVNRVQSVEETRLVIDAARATGFKSVSLDLIYGLPKQNVISFNR 230

Query: 190 ELQRALSYAVDHLSLY 205
            L++ L  + D +SLY
Sbjct: 231 TLEQVLDISPDRISLY 246


>gi|256004310|ref|ZP_05429292.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum DSM
           2360]
 gi|255991744|gb|EEU01844.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum DSM
           2360]
 gi|316939946|gb|ADU73980.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum DSM
           1313]
          Length = 505

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 142/286 (49%), Gaps = 20/286 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
           +GVY+  PFC  +C YC F S+ +++Y+   E++I++   E+  +  +   +   I SI+
Sbjct: 182 VGVYIGIPFCTTRCLYCSFTSNPIKKYEHMVESYIKALKKEIMSVAGILDKKKLKIESIY 241

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ IE  ++  +L  I +   +    E T+EA  P S+     +  + + V+RIS
Sbjct: 242 IGGGTPTSIEALHLKELLGFIEQALNLKDLKEYTLEAGRPDSITCEKLEIIKNSRVDRIS 301

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+ ++ L+ +GR H + + + A  LAR++ F  ++ D+I  LP  T+  +   ++ 
Sbjct: 302 INPQSMNDEILKKIGRLHTSKDIVEAFQLARSMGFDNINMDVIAGLPGSTLEDFVKTMEE 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
            +    + ++++ + I++ +   +  ++  L   SE     + +    I +  GL  Y  
Sbjct: 362 IIVLGPESVTVHTMAIKRASRLNEDRENYSLTSGSE--VSKMVDAAYDILTKMGLEPYYL 419

Query: 252 ----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV 286
                     E   +S  G ES++N+         I +G GA ++V
Sbjct: 420 YRQKNMLGNLENIGYSKAGYESIYNVQIMEEKQSIIALGAGAVTKV 465


>gi|300312505|ref|YP_003776597.1| oxygen-independent coproporphyrinogen III oxidase [Herbaspirillum
           seropedicae SmR1]
 gi|300075290|gb|ADJ64689.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 483

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 6/248 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A  +  +     +L +Y+H PFC   C YC  N  V + +     ++     E+   
Sbjct: 51  YLHAVSDRRSMSAWRALSLYLHIPFCDTICYYCACNKIVTKNRAKAALYLSYLKREISMQ 110

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEV 119
             L +G   +  + FGGGTP+ +  + ++ ++D I   +T++ +   E +IE +P +V V
Sbjct: 111 GSLFSGMNQVEQLHFGGGTPTYLSDEQMSDLMDHIRHCFTLAPDHVGEYSIEIDPRTVSV 170

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 R+ G NRISLGVQ  + +    + R  +  + +  I  AR+  F  +S DLIY 
Sbjct: 171 ERVHKLRQQGFNRISLGVQDFDPEVQLAVNRVQSEEQTLEIIRAARDAGFRSVSIDLIYG 230

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQ +      L + ++ + D +++Y        LF    +  +  LPS +  +D+ +L
Sbjct: 231 LPKQNVMSMSRTLAKVIAASPDRIAVYNYA-HMPQLFKTQRQIKEEDLPSADSKLDMLSL 289

Query: 239 T-QSITSA 245
             + +TSA
Sbjct: 290 CIRQLTSA 297


>gi|331090640|ref|ZP_08339491.1| hypothetical protein HMPREF9477_00134 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401080|gb|EGG80675.1| hypothetical protein HMPREF9477_00134 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 479

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 117/219 (53%), Gaps = 3/219 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ ++++K   + ++++   E+ ++ + +  + +++I+
Sbjct: 147 NGYSLYIGIPFCPTTCSYCSFTSYPIQQWKERTDEYLEALCKEISFVGETSKEKKLNTIY 206

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +E + +  +L  + K +++    E T+EA  P S+     +  ++  + RIS
Sbjct: 207 MGGGTPTTLEAEQLDRLLTHVEKTFSLEELKEFTVEAGRPDSITEAKLEVLKRHHITRIS 266

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H   + I    LAR + F  ++ DLI  L  + +      L++
Sbjct: 267 INPQTMQQKTLDSIGRRHTVEDVIRIFRLARKLGFDNINMDLIAGLTGENVDDMRDTLEK 326

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
                 D+L+++ L I++ +   +     +L+  SE ++
Sbjct: 327 IKELNPDNLTVHSLAIKRASKLNQTETKKELMNQSETLS 365


>gi|269798269|ref|YP_003312169.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269094898|gb|ACZ24889.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 475

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 138/293 (47%), Gaps = 23/293 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ M+ +     
Sbjct: 145 LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLRALNRDIEDMKSIVDSYG 204

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
            ++ +++ GGGTP+++E ++   +L  ++    VS   E T+EA  P SV     +   +
Sbjct: 205 LTVDTLYMGGGTPTVLEDEDFHQVLKQLS--LLVSEGHEFTVEAGRPDSVNPTKLRSMLE 262

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            GVNRIS+  Q++++  LR +GR H+  +    +   + N    ++ D I  LP QTM+ 
Sbjct: 263 LGVNRISINPQTMQDDILRRIGRGHSVRDVDELLQYVKNNTSLAVNMDFIAGLPNQTMSN 322

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L +++G+  Y +H + D  +P EN+  ++    +    A 
Sbjct: 323 MIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDD--IPEENLVAEMVQYGKERLEAA 380

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           G   Y +    ++  + L N+ Y   G                + +GPG+ S+
Sbjct: 381 GYMPYYLYRQQYMRGQ-LENIGYTLPGKACEYNIQIMEERQSILSMGPGSSSK 432


>gi|170755567|ref|YP_001782691.1| coproporphyrinogen III oxidase [Clostridium botulinum B1 str. Okra]
 gi|169120779|gb|ACA44615.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
          Length = 476

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    RS  I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRSLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGIKPY 388


>gi|89895194|ref|YP_518681.1| coproporphyrinogen III oxidase [Desulfitobacterium hafniense Y51]
 gi|219669624|ref|YP_002460059.1| coproporphyrinogen III oxidase [Desulfitobacterium hafniense DCB-2]
 gi|89334642|dbj|BAE84237.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539884|gb|ACL21623.1| Coproporphyrinogen dehydrogenase [Desulfitobacterium hafniense
           DCB-2]
          Length = 518

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 153/313 (48%), Gaps = 37/313 (11%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSI 71
             + VY+  PFC  +C YC F ++ +++ +   E+++Q    E++    WM+   G  + 
Sbjct: 189 QDVAVYIGIPFCPTRCSYCSFPAYSLKQGREPLEHYLQGLGEEIRTAGAWMK--AGGLTA 246

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGV 130
            S++ GGGTP+++  + +  ++  +  +       E T+EA  P ++        R +GV
Sbjct: 247 DSLYLGGGTPTILTIREMEGLIALMMTHIPHREAGEFTVEAGRPDTLSEGKLLALRASGV 306

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE 188
           NR+S+  Q++  ++L+ +GR H   + I A  LAR I P   ++ DLI  LP +     +
Sbjct: 307 NRLSVNPQTMHNRTLQRIGRAHTVEDIIKAYELAREI-PGWVINMDLIMGLPGEGAKDIQ 365

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA--- 245
             L+R  +   D+L+++ L I++G+   K H+ G     ++N+  +L  + + I +A   
Sbjct: 366 ETLERIRALEPDNLTVHALAIKRGS---KEHEQGS----TQNLGRELEGMQEDIMAAVRS 418

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRVKVGSH 291
            G+  Y +     + A +L N+ + + G                IG+G GA S++ V   
Sbjct: 419 MGMEPYYLYRQKHI-AGNLENIGFAKPGLACRYNIGIMEERQTVIGLGAGASSKI-VDPR 476

Query: 292 RVAISIEKHPESW 304
             ++    HP +W
Sbjct: 477 DFSLVSFHHPANW 489


>gi|241759265|ref|ZP_04757371.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
 gi|241320401|gb|EER56698.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
          Length = 473

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A     TG  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALSLRNTGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + D I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFDMIRKYFQLIPNGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P Q     +  +   LS   D L+LY
Sbjct: 231 PHQNTESIKTTIDTVLSLDPDRLALY 256


>gi|32474291|ref|NP_867285.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
 gi|32444829|emb|CAD74831.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
          Length = 466

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI 74
           N LG+Y+H PFC K+C +C F           + ++ +   E+  + QL   G R    +
Sbjct: 74  NPLGLYLHIPFCRKRCKFCYFKVFTDVKAQEVQRYVDALCNEISMVSQLPVMGDRPFRFV 133

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNRI 133
           +FGGGTPS + P+ +  + D + ++ T     E+T E  P ++     +  R+  GV R+
Sbjct: 134 YFGGGTPSFLSPKQLTKLADRLREHITWDGAEEVTFECEPGTLSETKVKTLREQLGVTRL 193

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAA---IHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           SLG+++  ++ L   GR H + +  +A   I  A+  FP ++ DLI  +  +T   W+  
Sbjct: 194 SLGIENFSDKLLEENGRAHLSKQVFSAWEWIEAAQ--FPNVNIDLISGMVGETWENWKDN 251

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLF 215
           ++R +  + + +++YQ+ +   T++
Sbjct: 252 IRRTIDMSPESVTIYQMELPFNTVY 276


>gi|329851558|ref|ZP_08266315.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           biprosthecum C19]
 gi|328840404|gb|EGF89976.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           biprosthecum C19]
          Length = 458

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
             S+G+YVH PFC + C +C  N+ + R     E ++ + LTE++ +  + G R  + ++
Sbjct: 51  DQSVGLYVHVPFCEQMCWFCGCNTQITRRYDPVEAYVDNLLTEIRLLAGVLGFRPRVHAL 110

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P ++ P+++  ++  + + + +  N EI+IE +P  V       Y   G NR+S
Sbjct: 111 HFGGGSPGMLTPESLTRLMTALFETFDIRDNAEISIELDPRRVTREKVLAYALLGFNRVS 170

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  + Q    + R     +      L R +    +  DLIY LP QT    E  L+ 
Sbjct: 171 LGVQDTQAQVQAAINRIQPMDQVKKTCDLLRAHDISEIGIDLIYGLPHQTANSLEHTLED 230

Query: 194 ALSYAVDHLSLY 205
               A + +S +
Sbjct: 231 VAKLAPNRISAF 242


>gi|262274017|ref|ZP_06051829.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
 gi|262221827|gb|EEY73140.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
          Length = 456

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 4/213 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C YC+F  +     +  E ++++   E++W    T  +S    +++ GG
Sbjct: 64  LYIHIPFCRVRCTYCNFFQYASSNSL-IEGYVEALRAEIRWKAAQTWSQSAPFQAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + I LI+  I   + ++ + EIT+E   +    + F+   + GVNR S GVQ
Sbjct: 123 GTPTDLSGEQIRLIVSDIRSLFPLTPDCEITLEGRINRFGTDKFEAALEGGVNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S      R   R  +    +  I  L+R     +  DL+Y LP QT+  W+ +L   L  
Sbjct: 183 SFNTLVRRSAKRLDDRDVVLEKIQQLSRYNAAPIVLDLLYGLPHQTLEIWQQDLNDYLES 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
               + LYQL   +G    K+ + G L LP++ 
Sbjct: 243 GAHGVDLYQLIEMQGLPMAKLVEAGKLPLPADT 275


>gi|149908542|ref|ZP_01897204.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
 gi|149808376|gb|EDM68313.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
          Length = 459

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C YC  N  + R++   + ++     E++        R++S + +GG
Sbjct: 55  LSLYVHIPFCHKLCYYCGCNKVITRHRHKADQYLDVLEAEIKQQAPFFKNRNVSQLHWGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I  ++D +  ++    + EI+IE +P  +E++      + G NR+SLGVQ
Sbjct: 115 GTPTFLTQPQIQRLIDVLRDSFNFDDDAEISIEVDPREIELSTIDLLAEVGFNRLSLGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             +++    + R  +     A I  A  + F   + DLIY LP QT   +   L+R L  
Sbjct: 175 DFDKKVQIAVNREQDEEFIFAIIKRAHELGFKSTNIDLIYGLPHQTKATFHKTLERVLDL 234

Query: 198 AVDHLSLY 205
               L+++
Sbjct: 235 DPARLTVF 242


>gi|168334817|ref|ZP_02692942.1| Coproporphyrinogen dehydrogenase [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 456

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 114/215 (53%), Gaps = 10/215 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPR-SI 71
           +  L +Y++ PFC  +C YC F S    ++++KV  ++++ +  TE+  +     P+  I
Sbjct: 140 ATDLSLYINXPFCPSRCSYCSFPSFTLTLKQHKV--DDYLTALATEISAITNNLDPKYQI 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +I+ GGGTP+ +  + +  ++  I KN  +SS  E T+EA  P ++       ++K  V
Sbjct: 198 KNIYIGGGTPTSLSAKQLQFLMAHIDKNVDMSSVTEYTVEAGRPETITAEKLAIFKKYHV 257

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWE 188
           +RIS+  Q+  + +L  +GRNHN  +   A+ L R I  F  ++ D+I  LP +T+    
Sbjct: 258 DRISINPQTFTQNTLDLIGRNHNVKDIYTAVDLVRKIGNF-DINMDIILGLPNETINNIT 316

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             + +    + ++++++ + I+  +   + +   D
Sbjct: 317 HTITKLADLSPENITIHTMAIKSASALRQQNYKAD 351


>gi|62185448|ref|YP_220233.1| coproporphyrinogen III oxidase [Chlamydophila abortus S26/3]
 gi|62148515|emb|CAH64286.1| putative coproporphyrinogen biosynthesis-related protein
           [Chlamydophila abortus S26/3]
          Length = 458

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 161/358 (44%), Gaps = 20/358 (5%)

Query: 14  QGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSI 71
           Q  NS L +Y H PFC   C YC  +  + R +   EN+I + + EM+++  L  G R  
Sbjct: 44  QKDNSPLSLYFHIPFCQSMCLYCGCSVVINRREDVVENYIATLIKEMEYVHTLLGGRRKT 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAG 129
           S I FGGGTPS +  +    +   I + + +S   EI IE +P S+  ++ +    +  G
Sbjct: 104 SRIHFGGGTPSRLSRKLFETLFSHIHRLFDLSEAEEIAIEFDPRSLRNDDTKAEFIQSLG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   + 
Sbjct: 164 FNRVSLGVQDTQAAVQEAVRRRQSYEESLYAYEKFRELGFESINIDLIYGLPKQTKVTFT 223

Query: 189 MELQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITS 244
             +   L    D L+L+   ++       K  K+ D+    E  A+  Y    LT++   
Sbjct: 224 QTIADILHMRPDRLALFSFASVPWIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQ 283

Query: 245 AHGLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
           A GL  + +       A     L  N+  Y      D IG+G  + S ++     + +  
Sbjct: 284 AIGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMSSTSFIR----GIYLQN 339

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            K  ES+ + +     A  + + LS + +  ++++  L     +S K++  L G   D
Sbjct: 340 AKTLESYHQKILSGSLATTKSKILSEDDKIRKWVIHKLMCTFVVSKKEFIQLFGYCFD 397


>gi|325662329|ref|ZP_08150938.1| hypothetical protein HMPREF0490_01677 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471331|gb|EGC74554.1| hypothetical protein HMPREF0490_01677 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 492

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 114/217 (52%), Gaps = 3/217 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S+ +  +K   E ++ +   E+ ++  ++  + +++I
Sbjct: 151 EDGYSLYVGIPFCPTTCAYCSFTSYPIEAWKTRVEEYLDALCKEISYVGDISKEKKLNTI 210

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  + + ++     EIT+EA  P S+     +  ++  + RI
Sbjct: 211 YIGGGTPTTLEADQLDRLLTHLEETFSYEEIKEITVEAGRPDSITREKLEVLKRHKIPRI 270

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   + +    +AR + F  ++ DLI  LP +T+   +  L+
Sbjct: 271 SINPQTMQQKTLDLIGRKHTVEDILRVYGMARELEFENINMDLIAGLPGETVKDVKDTLR 330

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           +    + D ++++ L +++ +   +M +  +  L  E
Sbjct: 331 QIEELSPDSITVHSLAVKRASRLAQMPELKEAALQEE 367


>gi|157691712|ref|YP_001486174.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032]
 gi|157680470|gb|ABV61614.1| coproporphyrinogen oxidase [Bacillus pumilus SAFR-032]
          Length = 499

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++  +   GQ   + +FL  + +  Q  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIK---GQAGRVGTFLFGLHYEMQKIGDWLKEHRIKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +++FGGGTP+ I  + + L+ + + +++    ++ E+T+EA  P ++  +  +   +  +
Sbjct: 229 TVYFGGGTPTSITAEEMDLLYEEMYRSFPDVKHIREVTVEAGRPDTISPDKLEVLNRYHI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H+  E I   HL+R      ++ DLI  LP + + +++ 
Sbjct: 289 DRISINPQSYENETLKAIGRHHSVEETIEKYHLSREYGMNNINMDLIIGLPGEGLKEFQH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L+ ++ +   + +KD   V   E +   + +   + T AH  H
Sbjct: 349 SLNKTEELKPESLTVHTLSFKRASEMTR-NKDKYQVADREEIT-RMMDEAVAWTKAHDYH 406

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
            Y            E   +S  G ESL+N+         IGIG GA S+
Sbjct: 407 PYYLYRQKNILGNLENVGYSLDGQESLYNIIIMEEVQTIIGIGCGAASK 455


>gi|304399052|ref|ZP_07380921.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
 gi|304353512|gb|EFM17890.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
          Length = 457

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC + C +C  N  V R +   + ++     E+     L   R ++ + +GG
Sbjct: 53  LSLYVHIPFCHRLCYFCGCNKIVTRQRHKADRYLDVLEQEIIQRAPLFRERKVTQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   I+ ++  + ++++V+ + E++IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLDNTQISRLVGLLKQHFSVAEDAEMSIEVDPREIELDVIDHLRSLGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +     + R  +       +  AR   F  +S DLIY LP QT   +   L+R L+ 
Sbjct: 173 DFNKSVQERVNRVQDEEVIFGLMARAREQGFSSVSIDLIYGLPLQTPASFAWTLERVLAL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + D LS++        +F    K  +  LPS    +D+   T +  +  G
Sbjct: 233 SPDRLSVFNYA-HLPAMFAAQRKIKEDELPSAQQKLDILQQTIATLTQQG 281


>gi|242241358|ref|YP_002989539.1| coproporphyrinogen III oxidase [Dickeya dadantii Ech703]
 gi|242133415|gb|ACS87717.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech703]
          Length = 457

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 3/229 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C +C  N  V R     + ++     E++    L   R ++ + +GG
Sbjct: 53  LSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDVLEQEIRQRAPLFAGRVVTQMHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   I+ ++  + +++ +S + E+++E +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLDASQISRLMAVLREHFNLSPSAEMSLEIDPREIELDILDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++  R + R  + S   A I  A+ + F   + DLIY LPKQT   +   LQR    
Sbjct: 173 DFNKEVQRLVNREQDESFIFALIARAKALGFASTNIDLIYGLPKQTPESFAFTLQRVAEL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
               LS++        LF    K     LPS +  +++   T Q +T A
Sbjct: 233 QPHRLSVFNYA-HLPNLFAAQRKIRQEDLPSADQKLNILQQTIQMLTHA 280


>gi|152980463|ref|YP_001353317.1| oxygen-independent coproporphyrinogen III oxidase
           [Janthinobacterium sp. Marseille]
 gi|151280540|gb|ABR88950.1| oxygen-independent coproporphyrinogen III oxidase
           [Janthinobacterium sp. Marseille]
          Length = 487

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 4/207 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A          + L +Y+H PFC   C YC  N  V + +    N++     E++  
Sbjct: 55  YLQAVTGATARGNMHPLSLYIHIPFCESICYYCGCNKIVTKDRSKAANYLVYLKREIEMQ 114

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEV 119
            + L G   +  + FGGGTP+ +    +  ++  + + ++ + + E   +IE +P +V  
Sbjct: 115 GKLLAGSNQVEQLHFGGGTPTYLTDAQMGELMLHLRRWFSFAPDAEGEYSIEVDPRTVTP 174

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
               G R+ G NRISLGVQ  + +  + + R    SE +A +  AR   F  +S DLIY 
Sbjct: 175 ERVHGLRRQGFNRISLGVQDFDAEVQKAVNRIQPESETVAIMDAARAAGFRSVSIDLIYG 234

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LPKQ +   E  L++ ++   D +++Y
Sbjct: 235 LPKQNLHTMEQTLEKVIAANPDRIAIY 261


>gi|260437934|ref|ZP_05791750.1| oxygen-independent coproporphyrinogen III oxidase 2 [Butyrivibrio
           crossotus DSM 2876]
 gi|292809685|gb|EFF68890.1| oxygen-independent coproporphyrinogen III oxidase 2 [Butyrivibrio
           crossotus DSM 2876]
          Length = 478

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 134/276 (48%), Gaps = 10/276 (3%)

Query: 4   LSAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ 60
           ++A EN +  T    N   +Y+  PFC   C YC F S+ +  +K   ++++ +   E++
Sbjct: 142 VAANENELLKTLDYKNGYSLYIGIPFCPTTCLYCSFTSYPISMWKDKVDSYLDALFKELK 201

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEV 119
           ++ +    R   SI+ GGGTP+ + P     + D +   +  S+  E T+EA  P S++ 
Sbjct: 202 YLSEHLRGRRPDSIYIGGGTPTTLLPYQFERLFDFLESCFDYSNLKEFTVEAGRPDSIDR 261

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +  +  +K G+ RIS+  Q++ +++L  +GR H   +      +AR+  F  ++ D+I  
Sbjct: 262 DKLEVIKKHGIGRISINPQTMNQKTLDLIGRRHTVEQICDTFKMARDCGFDNINMDMIVG 321

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYN 237
           LP +        L++ +  + D+L+++ L I++   L Y      D  + + +   ++  
Sbjct: 322 LPGEDKEDVRNTLEQIMKLSPDNLTVHSLAIKRAARLNYMKEAYADYRIDNTD---EIIT 378

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +T+      G+  Y +     + A +  N+ Y + G
Sbjct: 379 MTKEYADMMGMTPYYLYRQKNM-AGNFENVGYAKEG 413


>gi|317498120|ref|ZP_07956422.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894597|gb|EFV16777.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 476

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 111/201 (55%), Gaps = 3/201 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC   C YC F S+ + +++   ++++++ L E+ ++ +    + + +++ GGG
Sbjct: 164 LYIGIPFCPSTCLYCSFTSYSIDQFENIVQDYLEALLKELDFVAKTYAHKELQTMYIGGG 223

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ ++ +++  +L  + K +  S   EIT+EA  P S+     +  +K GV RIS+  Q
Sbjct: 224 TPTSLKEEDLEYLLYEVNKRFPFSKIQEITVEAGRPDSLNFEKLKILKKYGVTRISINPQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+ +++L+ +GRNH A +     +LAR      ++ D+I  LP++ M +    L      
Sbjct: 284 SMNDKTLKLIGRNHFAQDIKEKFNLARQAGIDNINMDMICGLPEEGMEELSYTLDEIKKL 343

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             + L+++ L +++ +   +M
Sbjct: 344 DPESLTVHALAVKRSSRLNRM 364


>gi|160878708|ref|YP_001557676.1| coproporphyrinogen III oxidase [Clostridium phytofermentans ISDg]
 gi|160427374|gb|ABX40937.1| Coproporphyrinogen dehydrogenase [Clostridium phytofermentans ISDg]
          Length = 491

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 13/263 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ + R++   E ++ +   EM++       + +S+++
Sbjct: 167 NGYSIYIGIPFCPSTCHYCSFTSYPLERFEHLVEPYLMALTKEMEYASTCLD-KPLSTLY 225

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +  + +  +L  I   + +    E+T+EA  P S+     Q  +  GV+RIS
Sbjct: 226 VGGGTPTTLSAKQLEYLLTKIDHYFGIKGLKELTVEAGRPDSITREKLQVLKDFGVSRIS 285

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+ +++L  +GR H A++   A +LAR I    ++ D+I  L  +  +     L R
Sbjct: 286 INPQSMRQKTLDLIGRKHTATQIEEAFYLAREIGHDNINMDIIIGLSGENPSDVIYTLDR 345

Query: 194 ALSYAVDHLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             S   D L+++ L I++        + +KD + V  S+ +A      T      +    
Sbjct: 346 IKSMNPDSLTVHTLAIKRAARLNTQKEQYKDMEAVRVSDMLAE-----TVKFAKENNYDP 400

Query: 251 YEISNHSFLGAESLHNLNYWRYG 273
           Y +     + AE+L N+ Y RYG
Sbjct: 401 YYLYRQKNM-AENLENVGYARYG 422


>gi|210612287|ref|ZP_03289235.1| hypothetical protein CLONEX_01436 [Clostridium nexile DSM 1787]
 gi|210151661|gb|EEA82668.1| hypothetical protein CLONEX_01436 [Clostridium nexile DSM 1787]
          Length = 417

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 14/204 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQL 65
           Y+  +      +LG+YVH PFC   C +C +   +   K+  + +I S L E+  +  Q 
Sbjct: 25  YDQKLPYSDCQNLGLYVHIPFCRSICNFCPYCKTLYSAKLC-DRYIDSLLHEIHLVGSQH 83

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G +  +S++FGGGTP+L   + I  I+D + +++ ++    I +E +P +V     Q  
Sbjct: 84  IGRKKATSLYFGGGTPALT-VERIKEIIDAVQEHFIITEG--IGVELHPDNVTPTVLQTL 140

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPK 181
           R AGV +IS+G+QS + +    LGR       + A+ L   +    F  +S D I+ALP 
Sbjct: 141 RDAGVTKISIGIQSFQNKFQNILGRT-----TVDAVKLKETLSEVPFETVSMDFIFALPN 195

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT    + ++ +A     +H+++Y
Sbjct: 196 QTFDDLKSDIDKAFQSGANHIAIY 219


>gi|331086132|ref|ZP_08335214.1| hypothetical protein HMPREF0987_01517 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406291|gb|EGG85805.1| hypothetical protein HMPREF0987_01517 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 492

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 114/217 (52%), Gaps = 3/217 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S+ +  +K   E ++ +   E+ ++  ++  + +++I
Sbjct: 151 EDGYSLYVGIPFCPTTCAYCSFTSYPIEAWKTRVEEYLDALCKEISYVGDISKEKKLNTI 210

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  + + ++     EIT+EA  P S+     +  ++  + RI
Sbjct: 211 YIGGGTPTTLEADQLDRLLTHLEETFSYEEIKEITVEAGRPDSITREKLEVLKRHKIPRI 270

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   + +    +AR + F  ++ DLI  LP +T+   +  L+
Sbjct: 271 SINPQTMQQKTLDLIGRKHTVGDILRVYGMARELEFENINMDLIAGLPGETVEDVKDTLR 330

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           +    + D ++++ L +++ +   +M +  +  L  E
Sbjct: 331 QIEELSPDSITVHSLAVKRASRLAQMPELKEAALQEE 367


>gi|256419733|ref|YP_003120386.1| coproporphyrinogen III oxidase [Chitinophaga pinensis DSM 2588]
 gi|256034641|gb|ACU58185.1| oxygen-independent coproporphyrinogen III oxidase [Chitinophaga
           pinensis DSM 2588]
          Length = 452

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 167/397 (42%), Gaps = 36/397 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
           +  + +Y+H P+C + C YC  N H+      +  +I S L E     +L   R  I  I
Sbjct: 47  TEGISIYIHLPYCEQLCTYCGCNKHITVNHGVEAPYIDSLLKEWSLYLELFKKRPRIREI 106

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  +L GI     +  +  ++ E +P++    +       G  R+S
Sbjct: 107 HLGGGTPTFFSPENLHQLLSGIYMQADLLPDATLSFEGHPNNTTTAHMLTLYNLGFRRMS 166

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q  + Q    + R             AR I +  +++DL+Y LP QT+T  +  + +
Sbjct: 167 LGIQDFDPQVQDIINRIQPYETVERVTAAAREIGYTSINYDLVYGLPLQTITSVKDTISK 226

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D +S Y              +  +  LP +     LY L +++ +  G     +
Sbjct: 227 VMQLRPDRISFYSYAHVPWVKGVGQRRYAEEDLPKDEEKRALYELGKTMFAESGYTEIGM 286

Query: 254 SNHSFLGAESLHNL--------NYWRYGDY---IGIGPGAHSRVKVGSHRVAISI-EKHP 301
            +H  L  +SL++         N+  Y D+   + IG GA S   +G    A +  EK  
Sbjct: 287 -DHFALPHDSLYHACKQGSLHRNFMGYTDHHTSLMIGLGASS---IGDSWYAYAQNEKKI 342

Query: 302 ESWLKMVRKNGHAVVEKEFLSSE----QQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            +W ++V      VV    L +E    ++    LM GL  R       W      N+D  
Sbjct: 343 TTWQQLVNSGQFPVVRGHILDTEDLLLRRHIHALMCGLDTR-------WT--PDDNIDSV 393

Query: 358 CERNLQRQGFIER-----VQFSRLRCTQRGMTMLDSV 389
            E +LQR   +E+     +Q+  +  T++G   + ++
Sbjct: 394 MEESLQRLTELEKDGLVDIQYGSVTVTEKGRPFIRNI 430


>gi|157146881|ref|YP_001454200.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157084086|gb|ABV13764.1| hypothetical protein CKO_02656 [Citrobacter koseri ATCC BAA-895]
          Length = 445

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 13/274 (4%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           VY+H PFC   C +C F        H  RY       I     EM+    L     I ++
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFEEDHCARYTDALLREI-----EMEADSTLHQSAPIHAV 114

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS +  +++A I+  + +   ++ + EITIE    + +         AG NR S
Sbjct: 115 YFGGGTPSALSARDLAKIITTLREKLPLAPDCEITIEGRVLNFDDARVDACLDAGANRFS 174

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS   +  + + R  +   AIA ++ L R     +  DL++ LP Q    W  +L  
Sbjct: 175 IGIQSFNSKIRKKMARTSDGPTAIAFMNGLVRRDRAAVVCDLLFGLPGQDAALWGEDLAI 234

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A    +D + LY L +   T   K  + G   +PS +   DLY        + G      
Sbjct: 235 ARDIGLDGIDLYALNLLPNTPLGKAVESGRTTVPSPSARRDLYLQGCDFMDSAGWRCISN 294

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRV 286
           S+ +    E +L+NL   +  D +  G GA   V
Sbjct: 295 SHWARTTRERNLYNLLIKQGADCLAFGSGAGGSV 328


>gi|257452294|ref|ZP_05617593.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058837|ref|ZP_07923322.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684513|gb|EFS21348.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 410

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 156/339 (46%), Gaps = 26/339 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           S  LG+Y+H P+C K C +C+ N   ++     E + +    ++++  +    +S  +  
Sbjct: 40  SKELGLYLHTPYCDKICSFCNMNR--KKVDAELEEYHEYLCQQIEYYGKFPFCQSSELEV 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP++   + +  IL  + KN+  S++ E+T E    ++ V   +  +  GVNR+
Sbjct: 98  VFFGGGTPTIYSNRQLENILQCLQKNFKFSNSYEMTFETTLHNLSVEKAKLLQANGVNRL 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+  ++  + L R+    EA   +   R  F   +  D+IY  P+Q+  +   ++ 
Sbjct: 158 SVGIQTFSDRGRKILNRSFGKKEAFQRLKALREAFHGLLCIDIIYNYPEQSDEEVLEDIH 217

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            A    +D +S Y L I++G+   K + K+             L+NL        G H  
Sbjct: 218 LASQLGIDSISFYSLMIQEGSEILKNLSKESIETFYDVKRDEQLHNLFYQEALTRGYHLL 277

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISI---EKHPESWLKM 307
           E++  +           Y R  + + IG GA   ++ +G + +   +    K+PE+  K+
Sbjct: 278 ELTKIT----NGKDKYRYIRSRNLLPIGVGAGGHLENIGCYHMNKKMTFYSKNPENTQKL 333

Query: 308 VRKNG------------HAVVEKEFLSSEQQADEFLMMG 334
            + +G              + EKE+    ++ +E++  G
Sbjct: 334 TQLSGFFQFDSFSDKKLQELAEKEYPRLRRKIEEYIQQG 372


>gi|225568636|ref|ZP_03777661.1| hypothetical protein CLOHYLEM_04714 [Clostridium hylemonae DSM
           15053]
 gi|225162564|gb|EEG75183.1| hypothetical protein CLOHYLEM_04714 [Clostridium hylemonae DSM
           15053]
          Length = 488

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 106/195 (54%), Gaps = 3/195 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F+S  +  +K   E+++ + + E+ ++ +++  + +++++ GGG
Sbjct: 152 LYVGIPFCPSVCTYCSFSSGALEAWKDRVEDYLDALMKELAYIGKVSAGKKLNTVYIGGG 211

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  +LD I  N++    +E T+EA  P S+         +  + RIS+  Q
Sbjct: 212 TPTTLTACQLERLLDCIDSNFSREHLLEYTVEAGRPDSITKEKLSVLYRHRITRISINPQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+++++L  +GR H   + +    LAR   F  ++ DLI  LP ++       L++A + 
Sbjct: 272 SMQQKTLDLIGRRHTVEDIVRTYALARETGFDNINMDLIAGLPGESAADMRDTLRQAEAL 331

Query: 198 AVDHLSLYQLTIEKG 212
           A D L+++ L I++ 
Sbjct: 332 APDSLTVHSLAIKRA 346


>gi|301155477|emb|CBW14943.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Haemophilus parainfluenzae T3T1]
          Length = 455

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++   +L   R  + + +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDYLEKEIKARSELFKNRVATQVHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  +  A ++  + +++T++ N E++IE +P  +E++     R  G NRIS+GVQ
Sbjct: 111 GTPTYLTEEQSARLMKMLKEHFTIADNAEVSIEMDPREIELDMLDHLRNIGFNRISMGVQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +   + + R  +     A +  AR + F   + DLIY LP Q +  +   L + +  
Sbjct: 171 DFNKAVQKAVNREQDEEFVNALLVRARELGFQSTNLDLIYGLPLQNVESFMFTLHKVIEL 230

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 231 NPDRLSIF 238


>gi|255526674|ref|ZP_05393579.1| Coproporphyrinogen dehydrogenase [Clostridium carboxidivorans P7]
 gi|296187179|ref|ZP_06855576.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255509654|gb|EET85989.1| Coproporphyrinogen dehydrogenase [Clostridium carboxidivorans P7]
 gi|296048214|gb|EFG87651.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 476

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 116/220 (52%), Gaps = 9/220 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQL- 65
           E ++  +  N++ VYV  PFC  +C YC F S+ ++  K   E ++QS   E++   +  
Sbjct: 138 EKSLVNKDKNTISVYVGMPFCPTRCLYCSFTSNPIKGCKNVVEPYLQSLCYEIEKTAEYI 197

Query: 66  -TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
            T    I  ++FGGGTP+ I  +    I++ I  ++   +N+ E T+E   P S+  +  
Sbjct: 198 RTKGLKIQCVYFGGGTPTSINDEQFEKIMEHIYNSFVRENNIEEFTVECGRPDSITSSKL 257

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              +K  V+RIS+  Q++ + +L+ +GR H   + I    +AR   F  ++ D+I  LP 
Sbjct: 258 NTMKKYNVHRISINPQTMNDDTLKLIGRKHTVQDVIDKFKMAREFGFNHINMDIIVGLPG 317

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + +   +   +  L  + D ++++ +++++ +   K+H++
Sbjct: 318 EELKHVKKTCKEILKLSPDSITVHGMSVKRAS---KLHEN 354


>gi|297203019|ref|ZP_06920416.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
           29083]
 gi|197712012|gb|EDY56046.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
           29083]
          Length = 484

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           G  + S  +Y+H PFC +KC +C ++ + VR       +++     E Q   Q      I
Sbjct: 57  GSETFSHNLYIHIPFCRQKCSFCYYSVAVVRDDTTIIWDYLHCLEKEAQSYLQARPGWRI 116

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPS + P+ IA + + +   + +S   EIT E +P S  ++  +   + GVN
Sbjct: 117 ETVFVGGGTPSRLNPEQIAFLFERVIGRFDLSGCREITYECSPDSATLDRIRAMAEHGVN 176

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWE-- 188
           R+S+GVQ+L+ + LR   RN +  E I    H+A +  P ++ DLI  + ++     E  
Sbjct: 177 RLSMGVQTLDPEILRKSRRNDSPDEVIRTYYHMADSGVPNVNIDLIAGIEREAFGNMERT 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTL 214
           M+   AL      ++L+ L++ +G++
Sbjct: 237 MDAVAALDPLPTQITLFTLSVREGSI 262


>gi|148381007|ref|YP_001255548.1| radical SAM domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153932471|ref|YP_001385378.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. ATCC
           19397]
 gi|153936844|ref|YP_001388785.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. Hall]
 gi|148290491|emb|CAL84619.1| putative oxidase [Clostridium botulinum A str. ATCC 3502]
 gi|152928515|gb|ABS34015.1| radical SAM domain protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932758|gb|ABS38257.1| radical SAM domain protein [Clostridium botulinum A str. Hall]
 gi|322807357|emb|CBZ04931.1| hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Clostridium botulinum
           H04402 065]
          Length = 476

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    R+  I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRNLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGMKPY 388


>gi|255020106|ref|ZP_05292177.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970468|gb|EET27959.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Acidithiobacillus caldus ATCC 51756]
          Length = 461

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 7/231 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIF 75
             L +Y+H PFC   C YC     V R++   E ++Q    EM+ +R+ + G R +  + 
Sbjct: 54  RPLSLYLHIPFCEHLCFYCACTKVVTRHREWGEPYVQRLEAEMRLLRRHVDGERPVVQLH 113

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           FGGGTP+ +   ++  +LD I +++ +      E  +E +P ++E       R  G NR+
Sbjct: 114 FGGGTPTFLRAADMDRLLDAIDRHFRLLPEDRGEYGVEVDPRALEPGMLARLRAFGCNRL 173

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ L+ +  R + R  +     A +  AR + +  +S DLIY LP+Q  + +   L 
Sbjct: 174 SMGVQDLDPEVQRAVHREQSLDLVAAVLAEARALGYRSISLDLIYGLPRQNRSSFANTLD 233

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             ++   D +SL+         F    +  +  LPS  + +D+  L+ SI 
Sbjct: 234 AIVALRPDRISLFNYA-HLPERFAPQRRIAEAELPSPALKLDI--LSDSIA 281


>gi|114561230|ref|YP_748743.1| coproporphyrinogen III oxidase [Shewanella frigidimarina NCIMB 400]
 gi|114332523|gb|ABI69905.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           frigidimarina NCIMB 400]
          Length = 446

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 20/314 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ L +YVH PFC K C YC  N  + R+    + +I+   TE+     L    +++ + 
Sbjct: 39  SDKLSLYVHIPFCAKLCYYCGCNKIITRHSHKADQYIEYLATEIIKRAPLFKNYTVTQMH 98

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ I  +   I +++  +   E +IE +P  +E++     ++AG NR+S+
Sbjct: 99  WGGGTPTFLSPEQILKLTALIKQHFNFADVGEYSIEVDPREIELSMLDTLKEAGFNRVSI 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +       I  A+ + F   + DLIY LP QT   +   + R 
Sbjct: 159 GVQDFNKEVQIAVNREQDEQFIFDLIARAKELGFVSTNVDLIYGLPLQTPETFAKTIARI 218

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSAH----GLH 249
           +  + D LS++       + F    K  +  +P+    +D+   T +S+T A     G+ 
Sbjct: 219 IELSPDRLSVFNYA-HLPSRFAAQRKIKEHDMPAPQQKLDMLRQTIESLTDAGYQFIGMD 277

Query: 250 AYEISNHSFL---GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            +   N        A  LH  N+  Y      D +G+G  + S++     +    I  + 
Sbjct: 278 HFAKPNDELAKLQNAGKLHR-NFQGYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYY 336

Query: 302 ESWLKMVRKNGHAV 315
           ES    +  NGHA+
Sbjct: 337 ES----IDANGHAL 346


>gi|170760684|ref|YP_001788376.1| coproporphyrinogen III oxidase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407673|gb|ACA56084.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 476

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 130/255 (50%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRGLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCKKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGMKPY 388


>gi|253682078|ref|ZP_04862875.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
 gi|253561790|gb|EES91242.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
          Length = 478

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 114/222 (51%), Gaps = 8/222 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQ--ENFIQSFLTEMQ 60
           ++  E     + S ++ +Y+  PFC   C YC F S+ +     G+  E +++    E+ 
Sbjct: 136 IAKAEKARVNKESKNISIYIGMPFCPTTCLYCSFASNPISGRNTGKMVEPYLEKLKEEID 195

Query: 61  WMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    +  +I  ++FGGGTP+ +       I+  + K++  + NV E  IE   P S
Sbjct: 196 IIKKFINKKGLNIECVYFGGGTPTSVNNDQFESIIKKVYKSFVENRNVKEFNIECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +        +K  V+RIS+  Q++ E +L+ +GR+H   + I   +LAR + F  ++ D+
Sbjct: 256 INEEKLLTMKKYKVSRISINPQTMNEDTLKLIGRHHTVEDIIKKFNLARKLGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           I  LP +T+   E   +  L    D L+++ ++I++G+  Y+
Sbjct: 316 IVGLPNETINHIENTCREILKLNPDSLTVHGMSIKRGSKLYE 357


>gi|312890867|ref|ZP_07750396.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
 gi|311296650|gb|EFQ73790.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
          Length = 454

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 37/343 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS  E+N    G++ L +Y+H PFC   C YC  N+ + +    +  +I + LTE     
Sbjct: 42  LSFKESN----GTDGLSLYIHLPFCESLCTYCGCNTRITKNHTVEIPYIDAVLTEWAMYL 97

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           Q+   +  I  I  GGGTP+     N+  ++ G+ K+  V    E + EA+P++   ++ 
Sbjct: 98  QMMDEKPVIREIHLGGGTPTFFSADNLNDLIKGLLKDSVVHPRAEFSFEAHPANTSFDHL 157

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q   + G  R+SLG+Q  + +    + R+ +  +  A    AR I +  +++DLIY LP 
Sbjct: 158 QTLYELGFTRLSLGIQDFDPKVQFIINRDQSVEQVTAITQQARQIGYTSINYDLIYGLPL 217

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           QT+      L+       D ++ Y       I+ G   +         LP+      L+ 
Sbjct: 218 QTVEGLINTLEIVSKLMPDRIAFYSYAHVPWIKPGQRRFTEQD-----LPNAEAKTRLHK 272

Query: 238 LTQSITSAHGLHA-----YEISNHSFLGAESLHNL--NYWRYGDYIGIGPGAHSRVKVGS 290
           +  S+  ++G H      + + +     AE   NL  N+  Y          H+R+ +G 
Sbjct: 273 IGVSLFKSYGYHEIGMDHFALPDDELFMAEKSGNLHRNFMGYTQ-------QHTRLLIGL 325

Query: 291 HRVAISIE--------KHPESWLKMVRKNGHAVVEKEFLSSEQ 325
              +IS          K  E +L++V      V +   L+ + 
Sbjct: 326 GVSSISDSYNAFAQNVKTVEEYLQLVNSGKLPVFKGHLLTDDD 368


>gi|9937241|gb|AAG02372.1|AF210249_32 coproporphyrinogen III oxidase-like protein [Streptomyces
           verticillus]
          Length = 424

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 18/297 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQ 60
           + + A    +  +    L +YVH PFC  KC +CD+ + +   ++ G       ++T + 
Sbjct: 9   RLIPAIREALGDEKDPRLALYVHVPFCSSKCHFCDWVTDIPVARLRGDSRERSPYVTALC 68

Query: 61  WMRQLTGPR------SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
              +  GP+          +++GGGTP+ +    +  +   +   + ++   + ++E+ P
Sbjct: 69  DQIRFYGPQLTRLGYRPEVMYWGGGTPTRLTGDEMTAVHQALDDAFDLTGLRQWSVESTP 128

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
           + ++       R  GV R+S+GVQSL    LR  GR H+  +A+AA+ L R       + 
Sbjct: 129 NDLDPATLDTLRGLGVTRVSVGVQSLNPYQLRKAGRAHSREQALAAVPLLRRAGIDEFNV 188

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVA 232
           DLI   P + +  +E  L+  L+    H+S+Y       T+   M  D + V   + +  
Sbjct: 189 DLIAGFPGEAVESFEETLRTVLALDPPHVSVYPYRATPKTVM-AMQLDREFVEARNRDGM 247

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-----NLNYWRYGDYIGIGPGAHS 284
           +D Y    +   A G H Y    H +   ++ H     N  Y   GD IG G GA S
Sbjct: 248 IDAYERAMAALGAAGYHEY---CHGYWVRDARHEDQDGNYKYDLAGDKIGFGSGAES 301


>gi|15607073|ref|NP_214455.1| coproporphyrinogen III oxidase [Aquifex aeolicus VF5]
 gi|3913815|sp|O67886|HEMN_AQUAE RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|2984325|gb|AAC07846.1| oxygen-independent coproporphyrinogen II [Aquifex aeolicus VF5]
          Length = 456

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
           + +    L +Y H PFC ++C YC  N  +   K  +E +++    EM  + Q L   R 
Sbjct: 45  SNERKTPLSLYFHIPFCEQRCLYCGCNVIISHRKGIEEPYLERVCREMDLVSQYLDKDRK 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ + P+ I   ++ I K +    N EI+IE +P  +     +  + AG 
Sbjct: 105 VIQLHWGGGTPNYLSPEQIKWFMEEIRKRFEFGDNAEISIELDPRYLTDEQIKAIKDAGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRISLGVQ L+ +  + + R          +   R   F  ++ DLIY LP QT   +E 
Sbjct: 165 NRISLGVQDLDPKVQQAVNRVQPYELIKEKMEKLREAGFESINLDLIYGLPYQTKESFEK 224

Query: 190 ELQRALSYAVDHLSLYQLT 208
            +++ +    D ++ Y   
Sbjct: 225 TVEKVIELNPDRIATYSFA 243


>gi|187778363|ref|ZP_02994836.1| hypothetical protein CLOSPO_01955 [Clostridium sporogenes ATCC
           15579]
 gi|187771988|gb|EDU35790.1| hypothetical protein CLOSPO_01955 [Clostridium sporogenes ATCC
           15579]
          Length = 476

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 129/255 (50%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDKNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    +   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHKGLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     HLA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVHRISINPQTMNNSTLKNIGRTHSVEDIERIYHLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   +R      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRRIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNRMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+ +    G+  Y
Sbjct: 374 EETEVLAKDLGMKPY 388


>gi|308188686|ref|YP_003932817.1| O2-independent coproporphyrinogen III oxidase [Pantoea vagans C9-1]
 gi|308059196|gb|ADO11368.1| O2-independent coproporphyrinogen III oxidase [Pantoea vagans C9-1]
          Length = 457

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 2/217 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC + C +C  N  V R +   + ++     E+     L   R ++ + +GG
Sbjct: 53  LSLYVHIPFCHRLCYFCGCNKIVTRQRHKADRYLDVLEQEIIQRAPLFRQRQVTQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   I+ ++  + ++++V+S+VE++IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTFLDNAQISRLVGLLKQHFSVASDVEMSIEIDPREIELDMIDHLRSLGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +     + R  +       +  AR   F  +S DLIY LP QT   +   L+R L+ 
Sbjct: 173 DFNKAVQERVNRVQDEEVIFGLMARAREQGFSSVSIDLIYGLPLQTPASFAWTLERVLAL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             D LS++        +F    K  +  LPS    +D
Sbjct: 233 NPDRLSVFNYA-HLPAMFAAQRKIKEDELPSAQQKLD 268


>gi|291534059|emb|CBL07172.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Megamonas hypermegale ART12/1]
          Length = 271

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 6/201 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           G  S    VY+H PFC + C YC F    S+  R  +  +  I+  L   ++  +     
Sbjct: 64  GDKSKKKAVYIHIPFCSQICLYCGFFQNYSNEERETMYVDRLIKQLLMAKEY--KYVQDS 121

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I+++FFGGGTPS + P N   +L  + +   ++++ EIT+EA    +     Q + K G
Sbjct: 122 VINAVFFGGGTPSTLSPYNADRLLKTMNEVLPLANDCEITMEARVHDLVDEKLQVWFKHG 181

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWE 188
           VNRIS+GVQS +    + +GR  +    I  +  A +     +  DLIY LP Q +  + 
Sbjct: 182 VNRISVGVQSFDTAIRQSMGRKDDKETVIENLKRAASYNQAVLIIDLIYGLPAQDVDNFV 241

Query: 189 MELQRALSYAVDHLSLYQLTI 209
            +L+ A S  +D + LYQL +
Sbjct: 242 NDLKIADSLPIDGMDLYQLNV 262


>gi|14041195|emb|CAC38737.1| HemN2 protein [Bradyrhizobium japonicum]
          Length = 410

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFF 76
           S  +Y+H PFC + C YC  ++ + R       + ++  +E+  + +  G R  +  I F
Sbjct: 7   SASLYLHVPFCREMCWYCGCHTQIVRRDDLIAAYQRTLRSEIALVAETIGRRIKVEHIHF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+  A ++  + + + V  + EI +E +P ++  +  +  R +GVNR SLG
Sbjct: 67  GGGTPTIMAPEAFAELMAAMRQAFFVLPSAEIAVEIDPRTLTADMVEAMRLSGVNRASLG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +    R + R  +  +  A + + R+     ++FDLIY LP QT+      ++R+L
Sbjct: 127 VQSFDPIVQRAINRIQSFEQTAAVVDMLRHAGIAGINFDLIYGLPHQTVASCLDTVRRSL 186

Query: 196 SYAVDHLSLY 205
             A D  S++
Sbjct: 187 LLAPDRFSVF 196


>gi|225386908|ref|ZP_03756672.1| hypothetical protein CLOSTASPAR_00656 [Clostridium asparagiforme
           DSM 15981]
 gi|225046920|gb|EEG57166.1| hypothetical protein CLOSTASPAR_00656 [Clostridium asparagiforme
           DSM 15981]
          Length = 513

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 6/252 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F S+ + ++K     ++ +   E+++  +    R + +++FGGG
Sbjct: 198 LYVGIPFCPTTCLYCSFTSYPIGKWKGRTGLYLDALFHELEYTARKMEGRPLDTVYFGGG 257

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +E   I  IL  + + + +S  +E T+EA  P S+     Q  R  G+ RIS+  Q
Sbjct: 258 TPTSLEAGEIDSILCKLDQLFDLSRALEFTVEAGRPDSITREKLQVLRDHGITRISINPQ 317

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ + +L  +GR H         ++AR + F  ++ DLI  LP++ M +    L    + 
Sbjct: 318 TMNQSTLDLIGRRHTVEMVKERFYMAREMGFDNINMDLIMGLPQEGMDEVRRTLDEIRAM 377

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D L+++ L I++      M K+    L  +N   ++ +L+ +     G+  Y +    
Sbjct: 378 KPDSLTVHSLAIKRAARL-NMFKEDYEGLTIQNTP-EMIDLSAACARELGMEPYYLYRQK 435

Query: 258 FLGAESLHNLNY 269
            + A +  N+ Y
Sbjct: 436 NM-AGNFENVGY 446


>gi|229828399|ref|ZP_04454468.1| hypothetical protein GCWU000342_00460 [Shuttleworthia satelles DSM
           14600]
 gi|229792993|gb|EEP29107.1| hypothetical protein GCWU000342_00460 [Shuttleworthia satelles DSM
           14600]
          Length = 633

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 12/271 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMR---QLTGPRS 70
           G     +Y++ PFC   C YC F S+  ++Y     +++ +   E+ ++R   Q    R 
Sbjct: 307 GRKGYSLYLNIPFCPSTCLYCSFTSYPEKKYAALMPDYVSALEREIDYVREDFQEEKKRV 366

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           + SI+ GGGTP+ +  + +  +L  I      S   E TIEA  P S+        R  G
Sbjct: 367 LDSIYIGGGTPTSLPAELLDRLLTCIESRLDTSQLKEWTIEAGRPDSITEARLDAIRGHG 426

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V RIS+  Q++++ +LR +GR+H + +   A  LAR+  F  ++ DLI  LP ++    E
Sbjct: 427 VTRISINPQTMKDGTLRLIGRHHTSEQIRTAYSLARSKGFDDINMDLIIGLPGESRADVE 486

Query: 189 MELQRALSYAVDHLSLYQLTIEK-GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             LQ   +   ++L+++ L +++   L  +  +    V+ S +   +L  L  S     G
Sbjct: 487 RTLQEIAAMGPENLTIHSLALKRTARLNLRWEEYAKYVMESSD---ELMALAASYAKKMG 543

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
           L  Y +     + A +  N+ Y + G Y GI
Sbjct: 544 LSPYYLYRQKNI-AGNQENVGYAKEG-YEGI 572


>gi|164687518|ref|ZP_02211546.1| hypothetical protein CLOBAR_01159 [Clostridium bartlettii DSM
           16795]
 gi|164603292|gb|EDQ96757.1| hypothetical protein CLOBAR_01159 [Clostridium bartlettii DSM
           16795]
          Length = 490

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 136/264 (51%), Gaps = 10/264 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQL--TGPRSIS 72
            N + +YV  PFC  +C YC F ++ V ++   +  +++  L E + + +L     + I 
Sbjct: 164 ENKVSLYVGIPFCPTRCYYCSFPANPVDKFGGKKPLYVEKLLQEAKGVAELLRDNNKEIE 223

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           +++ GGGTP+ + P+ +  ++ G+ K + +S+  E T+EA  P ++     +  +K GV+
Sbjct: 224 TLYIGGGTPTTLSPEEMDTLIKGLFKEFDLSNIKEFTVEAGRPDTINREILEVLKKHGVS 283

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  Q++ +++L+ +GR H+ ++ I    LAR + F  ++ D+I  L  + +   E  
Sbjct: 284 RISINPQTMNDETLQKVGRKHSVNDIIECFQLARELGFDNINMDIILGLVDENLAMVENT 343

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+     + + L+++ L +++ +   +   + +L    E     + +L+       GL+ 
Sbjct: 344 LKEIEKLSPESLTVHTLAVKRTSKLKENIDNYELTQFDE--MTKMIDLSMKYAKKMGLNP 401

Query: 251 YEISNHS-FLGAESLHNLNYWRYG 273
           Y +      LG  +L N+ Y + G
Sbjct: 402 YYMYRQKHMLG--NLENIGYAKEG 423


>gi|226950485|ref|YP_002805576.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|226842297|gb|ACO84963.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
          Length = 476

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    +S  I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHKSLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYSVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGMKPY 388


>gi|212697461|ref|ZP_03305589.1| hypothetical protein ANHYDRO_02031 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675545|gb|EEB35152.1| hypothetical protein ANHYDRO_02031 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 187

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
           E +I++ + E++  ++      I +I  GGGTPS ++ + I  I++ I K          
Sbjct: 8   EPYIKNLIKEIKLYQERLNI-EIDTIHIGGGTPSYVDAKYIEEIVNEIKKFKIEKIKEF- 65

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           TIE NP+S+       Y+  G+NRISLGVQS +++ L+ +GRNH A  A+  I + R+  
Sbjct: 66  TIECNPNSISKEKLAIYKDIGINRISLGVQSFDDEVLKEIGRNHTADIALKDIDMIRDAG 125

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           F  +SFDL+  LP+QT    + EL      + +H+S   L +E+G+ FY + K G
Sbjct: 126 FDNLSFDLMLNLPRQTYKSVKNELAMVKKISPEHISWCSLILEEGSRFYALDKKG 180


>gi|304437076|ref|ZP_07397039.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           sp. oral taxon 149 str. 67H29BP]
 gi|304370027|gb|EFM23689.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           sp. oral taxon 149 str. 67H29BP]
          Length = 501

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 31/297 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---- 69
           + + ++G+YV  PFC+ +C YC F SH+    +  EN +++F+  +  +R L        
Sbjct: 168 EDARTVGIYVGIPFCLSRCLYCSFPSHL----LPGENTLRAFMDVL--VRDLAAAAEDVR 221

Query: 70  ----SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQG 124
               ++  I+ GGGTP+ +     A +L  +   +  SS  E T+EA  P S+       
Sbjct: 222 TLGLTVGCIYIGGGTPTSLPDVFFAEMLKMVYNAFYGSSVREFTVEAGRPDSMSAAKITA 281

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQT 183
            +   V R+S+  QS++E++L  +GR+H  S+ +  +   R ++   ++ D+I  LP +T
Sbjct: 282 MKAYRVTRVSVNPQSMQERTLERIGRHHTPSDIVRMVQDIRASMDVHINMDVILGLPGET 341

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  +    +   D ++L+ L +++G+    M +   + LPS+   + +     +  
Sbjct: 342 AEDVRATMAAVTALRPDDITLHALALKRGSRLRLMMETEHVALPSDAETMRMNAAATAAV 401

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRV 286
            A G H Y +    ++  + L N+ Y R G                IGIG  A ++V
Sbjct: 402 RAAGYHPYYLYRQGYMSGD-LENVGYARPGAESIYNIRIMEERQTIIGIGGAAATKV 457


>gi|217969710|ref|YP_002354944.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T]
 gi|217507037|gb|ACK54048.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp.
           MZ1T]
          Length = 473

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
            G  S  L +Y H PFC   C YC  N  + +       +++    E++     L G R 
Sbjct: 61  VGGVSKPLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLKYLAKEIEMQAACLEGSRQ 120

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ +  GGGTP+ +    +  ++  + +++T+  N E +IE +P  V+ +  +   + G 
Sbjct: 121 VTQLHLGGGTPTFLSHDEMRELMAAVREHFTLVPNGEYSIEVDPRKVDFDTVKLLAELGF 180

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ   E   + + R  +  E    I  AR N F  +S DLIY LP+Q  T ++ 
Sbjct: 181 NRMSVGVQDFAEDVQQAVNRIQSFDETKLVIDAARANGFKSVSMDLIYGLPRQNPTSFDR 240

Query: 190 ELQRALSYAVDHLSLY 205
            L + L  + D +SLY
Sbjct: 241 TLDQVLEISPDRISLY 256


>gi|315633687|ref|ZP_07888977.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           segnis ATCC 33393]
 gi|315477729|gb|EFU68471.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           segnis ATCC 33393]
          Length = 455

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 1/191 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH PFC K C +C  N  + R++   + ++     E++    L   R  + + 
Sbjct: 48  TRPLSLYVHIPFCHKLCYFCACNKVITRHQHKADIYLDFLEREIKERSTLFTNRVATQVH 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +     A ++  +  N+ ++ N EI+IE +P  +E++  +  R  G NRIS+
Sbjct: 108 WGGGTPTYLTEAQSARLMQMLRDNFNIADNAEISIEMDPREIELSMLEHLRNIGFNRISM 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   +   + + R  + +   A +  AR + F   + DLIY LP Q++  +   L++ 
Sbjct: 168 GVQDFNKDVQKAVNREQDETFVNALLMRARELGFQSTNLDLIYGLPFQSVESFMFTLKKV 227

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 228 IELNPDRLSVF 238


>gi|300022130|ref|YP_003754741.1| radical SAM protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523951|gb|ADJ22420.1| Radical SAM domain protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 465

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 8/239 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPR--SISSIFFG 77
            Y+H PFC   C +C F  +   Y   Q   +    + E++      G R   I +++ G
Sbjct: 61  AYIHVPFCANHCLFCGFYRNA--YTPAQAATYTDLLVAEIEREPGAAGIRHHPIDAVYLG 118

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +   ++A I++ +  N  +S + EIT+E      + +       AGVNRIS+GV
Sbjct: 119 GGTPSALSASDLARIVEAVRTNLPLSPDCEITLEGRIIHFDDDKIDASLAAGVNRISIGV 178

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  R  GR  +  EAI  I   R+     +  DL+Y LP QT+  W  +L+ A  
Sbjct: 179 QCFDTEVRRRQGRRASKDEAIRFIKGIRDRNRAALVIDLLYGLPGQTLDIWREDLRIAAD 238

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            A D + LY L +  G+   +    G     +      +Y    SI  A G    +ISN
Sbjct: 239 LAPDGVDLYGLNLIPGSPLQRAVASGKQQPTTLQNLGAMYEAGASILGAKGWR--QISN 295


>gi|125973856|ref|YP_001037766.1| coproporphyrinogen III oxidase [Clostridium thermocellum ATCC
           27405]
 gi|281418018|ref|ZP_06249038.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum JW20]
 gi|125714081|gb|ABN52573.1| coproporphyrinogen III oxidase, anaerobic [Clostridium thermocellum
           ATCC 27405]
 gi|281409420|gb|EFB39678.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum JW20]
          Length = 505

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 142/286 (49%), Gaps = 20/286 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
           +GVY+  PFC  +C YC F S+ +++Y+   E++I++   E+  +  +   +   I SI+
Sbjct: 182 VGVYIGIPFCTTRCLYCSFTSNPIKKYEHMVESYIKALKKEIMSVAGILEKKKLKIESIY 241

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ IE  ++  +L  I +   +    E ++EA  P S+     +  + + V+RIS
Sbjct: 242 IGGGTPTSIEALHLKELLGFIEQALNLKDLKEYSLEAGRPDSITCEKLEIIKNSRVDRIS 301

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+ ++ L+ +GR H + + + A  LAR++ F  ++ D+I  LP  T+  +   ++ 
Sbjct: 302 INPQSMNDEILKKIGRLHTSKDIVEAFQLARSMGFDNINMDVIAGLPGSTLEDFVKTMEE 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
            +    + ++++ + I++ +   +  ++  L   SE     + +    I +  GL  Y  
Sbjct: 362 IIVLGPESVTVHTMAIKRASRLNEDRENYSLTSGSE--VSKMVDAAYDILTKMGLEPYYL 419

Query: 252 ----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV 286
                     E   +S  G ES++N+         I +G GA ++V
Sbjct: 420 YRQKNMLGNLENIGYSKAGYESIYNVQIMEEKQSIIALGAGAVTKV 465


>gi|167767124|ref|ZP_02439177.1| hypothetical protein CLOSS21_01642 [Clostridium sp. SS2/1]
 gi|167711099|gb|EDS21678.1| hypothetical protein CLOSS21_01642 [Clostridium sp. SS2/1]
 gi|291559547|emb|CBL38347.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [butyrate-producing bacterium SSC/2]
          Length = 476

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 111/201 (55%), Gaps = 3/201 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC   C YC F S+ + +++   ++++++ L E+ ++ +    + + +++ GGG
Sbjct: 164 LYIGIPFCPSTCLYCSFTSYSINQFENIVQDYLEALLKELDFVAKTYAHKELQTMYIGGG 223

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ ++ +++  +L  + K +  S   EIT+EA  P S+     +  +K GV RIS+  Q
Sbjct: 224 TPTSLKEEDLEYLLYEVNKRFPFSKIQEITVEAGRPDSLNFEKLKILKKYGVTRISINPQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+ +++L+ +GRNH A +     +LAR      ++ D+I  LP++ M +    L      
Sbjct: 284 SMNDKTLKLIGRNHFAQDIKEKFNLARQAGIDNINMDMICGLPEEGMEELSYTLDEIKKL 343

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             + ++++ L +++ +   +M
Sbjct: 344 DPESVTVHALAVKRSSRLNRM 364


>gi|254303386|ref|ZP_04970744.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323578|gb|EDK88828.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 469

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 112/212 (52%), Gaps = 5/212 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +   +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLEKVLKKLLENIDMTDVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LPK+T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGLPKETTEEILETLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              Y +D+L+++ L  ++ +  +K  ++ +++
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFKESQERNVI 357


>gi|331000087|ref|ZP_08323782.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|329572971|gb|EGG54591.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 463

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 148/347 (42%), Gaps = 54/347 (15%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM-RQLTGPRSISSIFFGG 78
            Y++ P+C  +C YC F     R K   + F  + + E+Q W  + +     + +++FGG
Sbjct: 80  AYINVPYCETRCLYCLFYIKPYRNKEESKAFADTLIKELQLWSDKPVQKGEPVHAVYFGG 139

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +E  +I  I+  + +   ++++ EIT E   S    +  +     G NR SLGVQ
Sbjct: 140 GTPTALEACDIERIIKAVRRYLPLANDCEITYEGRLSGFGTDKMEAALAGGANRFSLGVQ 199

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-------DLIYALPKQTMTQWEMEL 191
           S + +  + +GR  +    I      R +   MS+       DLIY  P QT+  W+ +L
Sbjct: 200 SFDTKIRQAVGRRSDKETLI------RQLEKLMSYDQAAVVIDLIYGFPFQTLETWKEDL 253

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLH 249
           +      +D +  YQL + + +  YK  ++G L  P  +  +      +++ S H  G  
Sbjct: 254 RIGRELNLDGIDCYQLRVFEKSPLYKYIQNGKLP-PGPDHELRAAMFQEAVQSMHEAGWK 312

Query: 250 AYEISNHSFLGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH--PE 302
              IS+     A +    N++ Y      D +  GPGA      G +       +H  P+
Sbjct: 313 RLSISHW----ASNTRERNFYNYYAKTRTDCLAFGPGA------GGNLSGYGFMQHRQPD 362

Query: 303 SWLKMVRKN----------------GHAVVEK---EFLSSEQQADEF 330
           +W K V                   G AV E+    F +  Q A EF
Sbjct: 363 AWAKAVESGVKPIAMMTKPPLFWELGRAVAEQLELNFFNPSQLAHEF 409


>gi|325266699|ref|ZP_08133375.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
 gi|324981808|gb|EGC17444.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
          Length = 610

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y+H PFC   C +C F  +  + + G    +  I+    E +   Q +G   I +++FG
Sbjct: 63  AYLHIPFCANHCVFCGFYRNAWKEEQGGAYVDKVIEELAAEAE---QRSGSGKIQAVYFG 119

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++  ++  ++    +   ++ N E T+E   S   +N  +   +AGVNRIS+G+
Sbjct: 120 GGTPTALDTPDLVRLIRACYQYLPLADNCEFTLEGRMSHFGLNKARAAVEAGVNRISIGI 179

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      R LGR H+  EA   +     +   +  DLI+ LP QT   WE +++RA S 
Sbjct: 180 QTFNTAIRRRLGRKHSGEEAYGYLKELCGLDAVIVADLIFGLPGQTDDIWEHDIERAASL 239

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +  L  Y           +M + G    P          L   + S H  +AY +   +
Sbjct: 240 PLSGLDTYAFNCYPFLPINRMIEKGAFPPP----------LGFDVQSQH--YAYAVRELT 287

Query: 258 FLGAESLHNLNYWRY 272
            LG + + N N++ Y
Sbjct: 288 RLGWQQVSN-NHFAY 301


>gi|237796512|ref|YP_002864064.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
 gi|229262736|gb|ACQ53769.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 476

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 130/255 (50%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRGLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYSVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGMKPY 388


>gi|225075367|ref|ZP_03718566.1| hypothetical protein NEIFLAOT_00372 [Neisseria flavescens
           NRL30031/H210]
 gi|224953287|gb|EEG34496.1| hypothetical protein NEIFLAOT_00372 [Neisseria flavescens
           NRL30031/H210]
          Length = 473

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALSLRNMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + D I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFDMICKYFQLIPNGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P Q     +  +   LS   D L+LY
Sbjct: 231 PHQNTESIKTTIDTVLSLNPDRLALY 256


>gi|56459301|ref|YP_154582.1| coproporphyrinogen III oxidase [Idiomarina loihiensis L2TR]
 gi|56178311|gb|AAV81033.1| Coproporphyrinogen III oxidase [Idiomarina loihiensis L2TR]
          Length = 453

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 99/192 (51%), Gaps = 1/192 (0%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            ++ L +Y+H PFC K C YC  N  + R++   + ++     EM   + +   + I  I
Sbjct: 46  ANDGLCLYLHLPFCHKLCYYCGCNKVITRHQHKADKYLDYLAGEMAMYQPMVRDKKIRQI 105

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ +  Q +  +++ + +++T + N E++IE +P S      +  RK G NR+S
Sbjct: 106 HLGGGTPTFLTEQQLTRLMELVHQHFTFAENPEVSIEIDPRSCSDEKLRHLRKLGFNRVS 165

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  +++    + R  +       + L++ + F  ++ DLIY LP Q    ++  +++
Sbjct: 166 YGVQDFDKKVQIAINRVQDIELIAHQLKLSKELGFESINLDLIYGLPYQRPETFKKSIEQ 225

Query: 194 ALSYAVDHLSLY 205
            +    D +S++
Sbjct: 226 VIEMDPDRISVF 237


>gi|302387918|ref|YP_003823740.1| Coproporphyrinogen dehydrogenase [Clostridium saccharolyticum WM1]
 gi|302198546|gb|ADL06117.1| Coproporphyrinogen dehydrogenase [Clostridium saccharolyticum WM1]
          Length = 484

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 117/240 (48%), Gaps = 17/240 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +Y+  PFC   C YC F S    + +GQ     E ++++   EM    +    R++ +++
Sbjct: 165 LYIGIPFCPTTCLYCSFTS----FPIGQWEKRMEQYLEALFKEMDDTAEKMAGRTLDTVY 220

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +   ++ +++  +   +  +   E T+EA  P S+ +   Q  +  GV RIS
Sbjct: 221 IGGGTPTSLSSLHLEMLISRLKTTFDFTRVKEFTVEAGRPDSITLEKLQVLKSHGVTRIS 280

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H         H+AR++ F  ++ DLI  LP++ M      ++ 
Sbjct: 281 INPQTMKQETLDLIGRRHTVDMVKDRFHMARSLGFDNINMDLIIGLPEEDMEDVVRTMEE 340

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             +   D ++++ L I++      M KD  GDL + +     ++  LT S     G   Y
Sbjct: 341 IQALGPDGITVHSLAIKRAARL-NMFKDKYGDLKITNTE---EMIGLTASYARNMGQEPY 396


>gi|2597840|emb|CAA05507.1| anaerbic coproporphyrinogen III oxidase [Bradyrhizobium japonicum]
          Length = 450

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFF 76
           S  +Y+H PFC + C YC  ++ + R       + ++  +E+  + +  G R  +  I F
Sbjct: 47  SASLYLHVPFCREMCWYCGCHTQIVRRDDLIAAYQRTLRSEIALVAETIGRRIKVEHIHF 106

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+  A ++  + + + V  + EI +E +P ++  +  +  R +GVNR SLG
Sbjct: 107 GGGTPTIMAPEAFAELMAAMRQAFFVLPSAEIAVEIDPRTLTADMVEAMRLSGVNRASLG 166

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +    R + R  +  +  A + + R+     ++FDLIY LP QT+      ++R+L
Sbjct: 167 VQSFDPIVQRAINRIQSFEQTAAVVDMLRHAGIAGINFDLIYGLPHQTVASCLDTVRRSL 226

Query: 196 SYAVDHLSLY 205
             A D  S++
Sbjct: 227 LLAPDRFSVF 236


>gi|330809474|ref|YP_004353936.1| coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377582|gb|AEA68932.1| Coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 462

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 139/302 (46%), Gaps = 13/302 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A + +       SL VY+H PFC   C YC  N  + R       ++     E+  
Sbjct: 39  EYQQAAQRSNQAPLPKSLSVYIHIPFCQSLCYYCACNKIITRKTHRAVEYLTYLKREIAL 98

Query: 62  MRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVE 118
              L    R ++ +  GGGTP+ +  + +A ++D + +++ +  S   E +IE +P +++
Sbjct: 99  QATLFDRSRKLTQLHLGGGTPTYLTHEQLADLMDCLHQSFDMDDSDAHEFSIEVDPRTID 158

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
               QG R+ G NR+S GVQ  + Q    + R  + ++ +  +  AR   F  +S DLIY
Sbjct: 159 AQQIQGLRQLGFNRLSFGVQDFDAQVQIAVNRVQSEAQVVELVEAARLARFKSVSVDLIY 218

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPS---ENVAV 233
            LP QT+  +++ L + ++   D ++ Y    + +     +M +  D+  P    E + +
Sbjct: 219 GLPLQTIASFDVTLSKIIALRPDRIAAYSYAHLPQRVRAQRMIRPEDMPPPERKLELLEL 278

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN-----YWRYGDYIGIGPGAHSRVKV 288
            +  LT++     G+  + + +   + A +  +L      Y  + D   IG G  S  KV
Sbjct: 279 TINRLTEAGYVYIGMDHFALPDDELVRARAQGSLQRNFQGYSTHADCDLIGLGVSSIGKV 338

Query: 289 GS 290
           G 
Sbjct: 339 GD 340


>gi|89897944|ref|YP_515054.1| coproporphyrinogen III oxidase [Chlamydophila felis Fe/C-56]
 gi|89331316|dbj|BAE80909.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           felis Fe/C-56]
          Length = 458

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 159/352 (45%), Gaps = 19/352 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  +  + R +   EN+I + + EM+ +  L  G R  S I FG
Sbjct: 50  LSLYIHIPFCQTMCLYCGCSVVINRREDIVENYISTLIKEMELVNTLLGGKRKTSRIHFG 109

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISL 135
           GGTPS +  +    +   I + + +S   EI IE +P S+  ++ +    +  G NR+SL
Sbjct: 110 GGTPSRLSRKLFEKLFSHIHRCFDLSEVEEIAIEFDPRSLRNDSEKAEFIQSLGFNRVSL 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   +   +   
Sbjct: 170 GVQDTQASVQEAVRRRQSYEESLHAYEKFRELGFESINIDLIYGLPKQTKKTFSQTIVDI 229

Query: 195 LSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAHGLHA 250
           L    D L+L+   ++       K  KD DL    E  A+     + LT+S   A GL  
Sbjct: 230 LQMRPDRLALFSFASVPWIKPHQKAMKDSDLPSMEEKFAIYSHARHMLTKSGYQAIGLDH 289

Query: 251 YEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           + +       A     L  N+  Y      D IG+G  + S ++     + +   K  ES
Sbjct: 290 FSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMTSTSFIR----GIYLQNAKTLES 345

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +   +     A ++ + LS + +  ++++  L     +S +++  L G + D
Sbjct: 346 YHTKILSGSLATIKSKVLSEDDRIRKWVIHKLMCTFVVSKEEFSHLFGYHFD 397


>gi|320017067|gb|ADW00639.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 456

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 176/405 (43%), Gaps = 28/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GG TP+ +    I+ ++  + +++    + E +IE +P  +E++    
Sbjct: 99  LFTGRQVSQMHWGG-TPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDH 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 158 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-----L 238
              +   L+R      D LS++       +LF    K  D  LP+    +D+       L
Sbjct: 218 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTIRFL 276

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           T+S     G+  +   +     A+   +LH  N+  Y      D +G+G  A S +    
Sbjct: 277 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 335

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 336 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 391

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           G         D E     ++ G +ER + + LR T RG  ++ ++
Sbjct: 392 GIRFADYFAEDFELLAPFEQDGLVERNE-TGLRVTPRGRLLIRNI 435


>gi|27382197|ref|NP_773726.1| coproporphyrinogen III oxidase [Bradyrhizobium japonicum USDA 110]
 gi|29840775|sp|O31381|HEMN_BRAJA RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|27355368|dbj|BAC52351.1| anaerbic coproporphyrinogen III oxidase [Bradyrhizobium japonicum
           USDA 110]
          Length = 450

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFF 76
           S  +Y+H PFC + C YC  ++ + R       + ++  +E+  + +  G R  +  I F
Sbjct: 47  SASLYLHVPFCREMCWYCGCHTQIVRRDDLIAAYQRTLRSEIALVAETIGRRIKVEHIHF 106

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+  A ++  + + + V  + EI +E +P ++  +  +  R +GVNR SLG
Sbjct: 107 GGGTPTIMAPEAFAELMAAMRQAFFVLPSAEIAVEIDPRTLTADMVEAMRLSGVNRASLG 166

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +    R + R  +  +  A + + R+     ++FDLIY LP QT+      ++R+L
Sbjct: 167 VQSFDPIVQRAINRIQSFEQTAAVVDMLRHAGIAGINFDLIYGLPHQTVASCLDTVRRSL 226

Query: 196 SYAVDHLSLY 205
             A D  S++
Sbjct: 227 LLAPDRFSVF 236


>gi|298369986|ref|ZP_06981302.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298281446|gb|EFI22935.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 468

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A E    G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 46  EYVKALELRGIGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 105

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  I   I K++ +  + E +IE +P  V  +
Sbjct: 106 LAPHLGGRHRLAQLHFGGGTPTFLSDDQLERIFHMIRKHFQLIPDGEYSIEIDPRKVSRD 165

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 166 TVLMLGKLGFNRMSVGIQDFDSKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 225

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 226 PHQTAESIKTTIDTVLSLDPDRLALYH 252


>gi|168181746|ref|ZP_02616410.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|182675211|gb|EDT87172.1| radical SAM domain protein [Clostridium botulinum Bf]
          Length = 476

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 130/255 (50%), Gaps = 7/255 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDMI 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  V E T+E   P S+ 
Sbjct: 194 SKYIQHRGLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYSVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY 251
             T+++    G+  Y
Sbjct: 374 EETEALAKDLGMKPY 388


>gi|301167275|emb|CBW26857.1| oxygen-independent coproporphyrinogen III oxidase [Bacteriovorax
           marinus SJ]
          Length = 430

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 1/190 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC   C +C  N  V R     +++I+  L E +  ++      ++SI+ GG
Sbjct: 46  INLYIHIPFCASLCTFCGCNIKVTRSSDQFQSYIEKILEEWKLYKEEYPQIELASIYLGG 105

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +   NI  ++D I +          TIE +P  ++V   +     G N +S+GVQ
Sbjct: 106 GTPTYLTLDNIKYLIDNILEGTKCDQTFFGTIETDPRLLQVEKLKYLSSVGFNALSIGVQ 165

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
               ++L  + R+ +  +  A ++ AR N F  ++ DLIY LP QT+  +E  L   L+ 
Sbjct: 166 DTNTETLANVNRHQSFDQVRALVNCARENGFSEINLDLIYGLPFQTLKSFEKSLNDVLTL 225

Query: 198 AVDHLSLYQL 207
             + ++ Y L
Sbjct: 226 KPERIANYPL 235


>gi|238926286|ref|ZP_04658046.1| coproporphyrinogen oxidase [Selenomonas flueggei ATCC 43531]
 gi|238885966|gb|EEQ49604.1| coproporphyrinogen oxidase [Selenomonas flueggei ATCC 43531]
          Length = 501

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 31/297 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---- 69
           + + ++G+YV  PFC+ +C YC F SH+    +  EN +++F+  +   R L        
Sbjct: 168 EDARTVGIYVGIPFCLSRCLYCSFPSHL----LPGENTLRAFMDVLA--RDLAAAAEDVR 221

Query: 70  ----SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQG 124
               ++  I+ GGGTP+ +     A +L  +   +  SS  E T+EA  P S+       
Sbjct: 222 TLGLTVGCIYIGGGTPTSLPDVFFAEMLKMVYNAFYRSSVREFTVEAGRPDSMSAAKITA 281

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQT 183
            +   V R+S+  QS++E++L  +GR+H  S+ +  +   R ++   ++ D+I  LP +T
Sbjct: 282 MKAYRVTRVSVNPQSMQERTLERIGRHHTPSDIVRMLQDIRASMDVHINMDVILGLPGET 341

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  +    +   D ++L+ L +++G+    M +   + LPS+   + +     +  
Sbjct: 342 AEDVRATMAAVTALRPDDITLHALALKRGSRLRLMMETEHVALPSDAETMRMSAAATAAV 401

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRV 286
            A G H Y +    ++  + L N+ Y R G                IGIG  A ++V
Sbjct: 402 RAAGYHPYYLYRQGYMSGD-LENVGYARPGAESIYNIRIMEERQTIIGIGGAAATKV 457


>gi|108759540|ref|YP_631099.1| coproporphyrinogen III oxidase [Myxococcus xanthus DK 1622]
 gi|108463420|gb|ABF88605.1| coproporphyrinogen III oxidase family protein [Myxococcus xanthus
           DK 1622]
          Length = 438

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++L +Y+H PFC  +C +C+  +     +   + ++ + + E + +++  G  S +    
Sbjct: 45  DALFLYIHVPFCEMRCGFCNLFTAAGPKQDVVDGYLGALVRETKRVKEALGTASFARAAI 104

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+L++   +  + D +A+    +   N+ +++E +P +V+    Q  R  G +R+S
Sbjct: 105 GGGTPTLLDVAGLNTVFD-MAEGVMGADMKNIPVSVEVSPETVDAQKLQVLRSRGTDRVS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  E  +  + R    ++  AA+ L R+  FP ++ DLIY +  QT   +   L+ 
Sbjct: 164 MGIQSFIEAEVAAVKRPQKTAQVEAALDLIRSTGFPTLNLDLIYGMEGQTEESFLYSLRT 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           AL Y+ + + LY L +   T   K  +  D
Sbjct: 224 ALRYSPEEIYLYPLYVRPLTFLGKKARAWD 253


>gi|74316653|ref|YP_314393.1| coproporphyrinogen III oxidase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056148|gb|AAZ96588.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Thiobacillus denitrificans ATCC 25259]
          Length = 456

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 2/195 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
            +   +L +Y H PFC   C YC  N    R       ++ +   EM+    L  P R +
Sbjct: 44  ARSDRALSLYAHVPFCDSLCYYCGCNMVATRDYSKTVPYLAAIEREMERTAALVDPGRVV 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             + +GGGTP+ + P +I  ++  + +N+T++ + EI+ E +P  +   +    R+ G N
Sbjct: 104 RQLHWGGGTPTYLNPDDIRRLMAMMQRNFTIAPDAEISCEVDPRELTYEHLAALRETGFN 163

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ ++    + + R  +       +  AR + F  ++ DLI  LPKQT+  +   
Sbjct: 164 RLSFGVQDMDSDVQQAVNRIQSEFLIRQVLDWARELGFSSINLDLIVGLPKQTVESFSRT 223

Query: 191 LQRALSYAVDHLSLY 205
           L+R  ++A D L+++
Sbjct: 224 LERVTNWAPDRLAVF 238


>gi|303257941|ref|ZP_07343950.1| putative oxygen independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
 gi|302859284|gb|EFL82366.1| putative oxygen independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
          Length = 434

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 147/347 (42%), Gaps = 54/347 (15%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM-RQLTGPRSISSIFFGG 78
            Y++ P+C  +C YC F     R K     F  + + E+Q W  + +     + +++FGG
Sbjct: 51  AYINVPYCETRCLYCLFYIKPYRNKEESNAFADTLIKELQLWSDKPVQKGEPVHAVYFGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +E  +I  I+  + +   ++++ EIT E   S    +  +     G NR SLGVQ
Sbjct: 111 GTPTALEACDIERIIKAVRRYLPLANDCEITYEGRLSGFGTDKMEAALAGGANRFSLGVQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-------DLIYALPKQTMTQWEMEL 191
           S + +  + +GR  +    I      R +   MS+       DLIY  P QT+  W+ +L
Sbjct: 171 SFDTKIRQAVGRRSDKETLI------RQLEKLMSYDQAAVVIDLIYGFPFQTLETWKEDL 224

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLH 249
           +      +D +  YQL + + +  YK  ++G L  P  +  +      +++ S H  G  
Sbjct: 225 RIGRELNLDGIDCYQLRVFEKSPLYKYIQNGKLP-PGPDHELRAAMFQEAVQSMHEAGWK 283

Query: 250 AYEISNHSFLGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH--PE 302
              IS+     A +    N++ Y      D +  GPGA      G +       +H  P+
Sbjct: 284 RLSISHW----ASNTRERNFYNYYAKTRTDCLAFGPGA------GGNLSGYGFMQHRQPD 333

Query: 303 SWLKMVRKN----------------GHAVVEK---EFLSSEQQADEF 330
           +W K V                   G AV E+    F +  Q A EF
Sbjct: 334 AWAKAVESGVKPIAMMTKPPLFWELGRAVAEQLELNFFNPSQLAHEF 380


>gi|189347434|ref|YP_001943963.1| coproporphyrinogen III oxidase [Chlorobium limicola DSM 245]
 gi|189341581|gb|ACD90984.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           limicola DSM 245]
          Length = 473

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 119/252 (47%), Gaps = 4/252 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +E ++++   E Q ++    G  ++  +
Sbjct: 49  TTGISMYIHIPYCENYCYFCGCNAHRTQDHSFEEPYLEALQKEWQMYLDVFPGTLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+A +++ + +      N   + E NP S    + +   + G  R+S
Sbjct: 109 HIGGGTPTFFSPENLARLVENLFRTVNRMDNYMFSFETNPRSTSKEHLEALYRVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      + +
Sbjct: 169 FGIQDFDPVVQQEINRPQSFELVKEKVDLARQIGFTSVNFDLVYGLPKQTLATITDTIDK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +V  +LY+  +++  + G H   +
Sbjct: 229 VMQLRPDRLAFYAYG-HNPHMYEGQRKFKEEDLPVGDVKQELYDKGRAMLESIGYHEIGM 287

Query: 254 SNHSFLGAESLH 265
            +H  L  +SL+
Sbjct: 288 -DHFALEGDSLY 298


>gi|256846489|ref|ZP_05551946.1| coproporphyrinogen oxidase [Fusobacterium sp. 3_1_36A2]
 gi|256718258|gb|EEU31814.1| coproporphyrinogen oxidase [Fusobacterium sp. 3_1_36A2]
          Length = 469

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 149/322 (46%), Gaps = 28/322 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +   +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMADVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ I   ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKIGFIINMDLIIGLPEETTEEILNTLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
              Y +D+L+++ L  ++ +  +K  ++ +++   +   ++ Y   Q I     +  Y  
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFKESQERNII---DRALIEKY--IQKIVEEKAMKPYYM 380

Query: 252 ----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIE-- 298
                     E   +S  G ES+ N+       + + +G G  S++ +        IE  
Sbjct: 381 YRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIEERNGIDYIERY 440

Query: 299 ---KHPESWLKMVRKNGHAVVE 317
              K P  +++ + K     +E
Sbjct: 441 VNPKDPALYIRELDKRCKEKIE 462


>gi|226311475|ref|YP_002771369.1| coproporphyrinogen III oxidase [Brevibacillus brevis NBRC 100599]
 gi|226094423|dbj|BAH42865.1| putative coproporphyrinogen III oxidase [Brevibacillus brevis NBRC
           100599]
          Length = 507

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 144/296 (48%), Gaps = 29/296 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ----WMRQLTGP 68
           Q    L VY+  PFC  KC YC F ++ +R +      F++    EM+    W+R     
Sbjct: 167 QIDRELSVYIGIPFCPTKCAYCTFPAYAIRSHTASVNPFLEGLHYEMERMGEWLR--AND 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYR 126
           + I+SI+FGGGTP+ I   ++  + + + +++    +V E+T+EA  P ++        +
Sbjct: 225 QRITSIYFGGGTPTSITADDMNQLFETMHRSFPHMGDVRELTVEAGRPDTITREKLDVMK 284

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +  V+RIS+  QS  +++L+ +GR+H   E I   HLA  +    ++ DLI  LP + ++
Sbjct: 285 RWEVDRISINPQSFTQETLQAIGRHHTVEETIEKYHLAMEMGLTNINMDLIIGLPNEGVS 344

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +    LQ         L+++ L+ ++ +   + +KD   V   E ++  +  +    T+A
Sbjct: 345 ELAHSLQEVEKLMPASLTVHTLSFKRASEMTQ-NKDRYKVASREEIS-KMMEMASDWTAA 402

Query: 246 HGLHAYEI-SNHSFLGAESLHNLNYWRYGD--------------YIGIGPGAHSRV 286
           +G   Y +    + LG  +L N+ Y + G                +G+G GA S++
Sbjct: 403 NGYDPYYLYRQKNILG--NLENVGYAKPGQESIYNIMIMEEVQTILGLGCGAVSKL 456


>gi|119470396|ref|ZP_01613124.1| coproporphyrinogen III oxidase [Alteromonadales bacterium TW-7]
 gi|119446321|gb|EAW27597.1| coproporphyrinogen III oxidase [Alteromonadales bacterium TW-7]
          Length = 457

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 1/191 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S SL +YVH PFC + C YC  N  + R++   + +I     E+     L    S+  + 
Sbjct: 49  SRSLSLYVHIPFCSQLCYYCGCNKIITRHQSKADTYIDFLAKEIAAQAPLFKHYSVEQLH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ + PQ +  ++  + +++  +S  E  IE +P S+  N     R  G NR+S 
Sbjct: 109 LGGGTPTFLTPQQMKRLITLLEQHFNFTSTTERGIEVDPRSLAENMLVDLRMLGFNRVSF 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q   +     + R  +A      I  AR + F  ++ D+IY LP QT   ++  +++ 
Sbjct: 169 GIQDFNDDVQLAVNRPQHADTVKQLITQARELGFKSINADMIYGLPLQTPESFKQTIEQL 228

Query: 195 LSYAVDHLSLY 205
           +  + D +S++
Sbjct: 229 IELSPDRVSVF 239


>gi|294792130|ref|ZP_06757278.1| putative Fe-S oxidoreductase [Veillonella sp. 6_1_27]
 gi|294457360|gb|EFG25722.1| putative Fe-S oxidoreductase [Veillonella sp. 6_1_27]
          Length = 475

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 138/293 (47%), Gaps = 23/293 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ M+ +     
Sbjct: 145 LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLRALNRDIEDMKSIVDSYN 204

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
            ++ +++ GGGTP+++E ++   +L  ++    V    E T+EA  P SV     Q   +
Sbjct: 205 LTVDTLYMGGGTPTVLEDEDFHQVLKLLS--ILVPEGHEFTVEAGRPDSVNPVKLQSMLE 262

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            GVNRIS+  Q++++  LR +GR H+A +    +   + N    ++ D I  LP QTM+ 
Sbjct: 263 LGVNRISINPQTMQDDILRRIGRGHSAWDIDELLQYVKNNTSLAVNMDFIAGLPNQTMSN 322

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L +++G+  Y +H + D  +P EN+  ++    +    A 
Sbjct: 323 MIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDD--IPEENLVAEMVQYGKERLEAA 380

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           G   Y +    ++  + L N+ Y   G                + +GPG+ S+
Sbjct: 381 GYVPYYLYRQQYMRGQ-LENIGYTLPGKACEYNIQIMEERQSILSMGPGSSSK 432


>gi|329941292|ref|ZP_08290571.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
 gi|329299823|gb|EGG43722.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
          Length = 460

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 151/348 (43%), Gaps = 21/348 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQSFLTEM--QWMRQLTGPRSI 71
           VYVH PFC  KC +CD+ + +   ++        +  ++ +   E+  +  R        
Sbjct: 57  VYVHIPFCRSKCHFCDWVTEIPTSELLLTETDQPRRRYVDALCHEITERGSRLTEAGYRP 116

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAG 129
           + +++GGGT S++    I+ +   + + +       +E TIE +P ++E      +R+ G
Sbjct: 117 TILYWGGGTASILSLDEISRVGAALRRAFPALGGELLESTIECSPETLEPEKLAAFREIG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             R+S GVQS ++  LR LGR+H+A +A   +  AR   F  +S DLI   P Q   +  
Sbjct: 177 FRRLSSGVQSFDDARLRTLGRSHDAHQARTIVQQAREAGFEDISIDLICGFPGQPSAETR 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++ AL   + H++LY      GT+  +    G+  L  +          + +T A G 
Sbjct: 237 EAVRVALDLPLTHVALYPYRPAHGTVMRRQLGRGNRRLDRQEQKRGYAEGAELLTGA-GF 295

Query: 249 HAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             Y +S+    G     +L Y++   D+ G G GA S V  G +        H    L  
Sbjct: 296 EEYAMSHFGTGGLRCHSDLAYFQLRCDWAGFGSGATS-VLDGRYL------SHGRGRLLE 348

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             ++  A  E   L+S   A   L   L   EG   + WE   G+  +
Sbjct: 349 YNRDPLAFDEDYALASAAIAPRMLYQSLTTYEGARREWWERRTGQPFE 396


>gi|269302677|gb|ACZ32777.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pneumoniae LPCoLN]
          Length = 458

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           +    L +Y H PFC   C YC  +  + R +   E +I + + EM+ + +  G R  +S
Sbjct: 45  ENPQPLSLYFHIPFCQSMCLYCGCSVVLNRREDIVEAYINTLIQEMKLVVETIGFRPQVS 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
            I FGGGTPS +  +   L+ D I K + +S   EI IE +P S+  ++     ++  G 
Sbjct: 105 RIHFGGGTPSRLSRELFTLLFDHIHKLFDLSHAEEIAIEVDPRSLRNDMEKADFFQNVGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  +      + R  +  E++ A    + + F  ++ DLIY LPKQT   +  
Sbjct: 165 NRVSLGVQDTQADVQEAVRRRQSHEESLKAYEKFKELGFQSINIDLIYGLPKQTKESFSK 224

Query: 190 ELQRALSYAVDHLSLYQL 207
            +Q  L+   D L+L+  
Sbjct: 225 TIQDILAMYPDRLALFSF 242


>gi|192290797|ref|YP_001991402.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris TIE-1]
 gi|192284546|gb|ACF00927.1| Coproporphyrinogen dehydrogenase [Rhodopseudomonas palustris TIE-1]
          Length = 486

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 6/221 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISS 73
           S +   Y+H P+C   C +C F  +V R +VG   ++   + E+  +    L     I +
Sbjct: 92  SETAVAYLHVPYCQNHCLFCGFFENVWRPEVGPA-YVDDLIAELAAKSHTPLIASAPIDA 150

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS ++  ++A ++  + +   +S++ EIT+E      ++   +    AGVNR+
Sbjct: 151 IYIGGGTPSALDADDLARLMAALHRYLPLSADCEITLEGRSYGFDIAKARKLADAGVNRL 210

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
           S+GVQS   +  R LGR  +  E +AA         R S   DLIY L  Q+   W  ++
Sbjct: 211 SIGVQSFSTEVRRRLGRKRSGEE-VAAFLAELMALGRTSVVCDLIYGLSGQSDADWRRDI 269

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
                  +D ++LY L +  G    +  ++G L  P+   A
Sbjct: 270 DTVSRIGLDGVTLYALNMFPGGPMARAVENGKLPQPATPAA 310


>gi|15618798|ref|NP_225084.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae CWL029]
 gi|15836422|ref|NP_300946.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
 gi|16752147|ref|NP_445514.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae AR39]
 gi|33242251|ref|NP_877192.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae TW-183]
 gi|4377208|gb|AAD19027.1| Coproporphyrinogen III Oxidase [Chlamydophila pneumoniae CWL029]
 gi|7189890|gb|AAF38757.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pneumoniae AR39]
 gi|8979263|dbj|BAA99097.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
 gi|33236762|gb|AAP98849.1| oxygene-independent coproporphyrinogen III oxidase [Chlamydophila
           pneumoniae TW-183]
          Length = 458

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           +    L +Y H PFC   C YC  +  + R +   E +I + + EM+ + +  G R  +S
Sbjct: 45  ENPQPLSLYFHIPFCQSMCLYCGCSVVLNRREDIVEAYINTLIQEMKLVVETIGFRPQVS 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
            I FGGGTPS +  +   L+ D I K + +S   EI IE +P S+  ++     ++  G 
Sbjct: 105 RIHFGGGTPSRLSRELFTLLFDHIHKLFDLSHAEEIAIEVDPRSLRNDMEKADFFQNVGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  +      + R  +  E++ A    + + F  ++ DLIY LPKQT   +  
Sbjct: 165 NRVSLGVQDTQADVQEAVRRRQSHEESLKAYEKFKELAFQSINIDLIYGLPKQTKESFSK 224

Query: 190 ELQRALSYAVDHLSLYQL 207
            +Q  L+   D L+L+  
Sbjct: 225 TIQDILAMYPDRLALFSF 242


>gi|320530554|ref|ZP_08031611.1| radical SAM domain protein [Selenomonas artemidis F0399]
 gi|320137227|gb|EFW29152.1| radical SAM domain protein [Selenomonas artemidis F0399]
          Length = 551

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 23/285 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           T   ++    Y+H PFC KKC YC F  +  + +     ++   L E+    +    +  
Sbjct: 65  TPDPADERAAYIHIPFCDKKCSYCGFFQNYTKEEAAH-RYVDVLLQELDAAAETPYVQGA 123

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++FFGGGTP+ +   ++A ++  + +   ++S+ EIT+E     +  +  +   +AG
Sbjct: 124 PFQAVFFGGGTPTALSDADLARLVRAVRERLPLTSDAEITLEGRIHDLTESKVEAAMRAG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
           VNR SLGVQS + +  + +GR  +    +A +  +       +  DLIY LP Q+   WE
Sbjct: 184 VNRFSLGVQSFDTRVRQSIGRIDDHDTVVATLRRMVEKQGAVVIADLIYGLPYQSPEVWE 243

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLP-----SENVA-----VDLYN 237
            +++      +    LYQL +   +      K GDL +LP     SE  A     VD   
Sbjct: 244 NDVRTQFEIGIAGGDLYQLNVFPASELAARIKSGDLPMLPTTEEQSEYFARGIAIVDENP 303

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           + + I + H       ++H      SL+N    R  D +  G GA
Sbjct: 304 MARRIDTTHW-----TTDHR---ERSLYNTLAKRGNDILAFGSGA 340


>gi|134094857|ref|YP_001099932.1| coproporphyrinogen dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 465

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 5/240 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL       T  G   L +YVH PFC   C YC  N  V R +     ++     E++  
Sbjct: 29  YLQTVVGLRTRGGMWPLSLYVHIPFCESVCHYCSCNKVVTRDRSKAATYLSYLKHEIEMQ 88

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEV 119
             L  G   I  +  GGGTP+ +    +  ++  + +++  +S+   E  IE +P +V V
Sbjct: 89  GNLFAGMNQIEKLHIGGGTPTYLNDAQMGELMAHLRRHFRFASDFDGEYAIEVDPRTVTV 148

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
                 RK G NRIS+GVQ  +    + + R  +  + +  I  AR   F  +S DLIY 
Sbjct: 149 ERIHALRKQGFNRISIGVQDFDPDVQQAVNRIQSEQDTLNIIRAAREACFRSVSIDLIYG 208

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQ +      L + ++ + D +++Y   + +  +F    +  +  LPS +  +++++L
Sbjct: 209 LPKQNVITMAQTLNKVINASPDRIAVYNY-VHRPNMFKPQRRIDEDDLPSLDARLNMFSL 267


>gi|329943215|ref|ZP_08291989.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci Cal10]
 gi|332287795|ref|YP_004422696.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci 6BC]
 gi|313848367|emb|CBY17371.1| putative coproporphyrinogen biosynthesis-related protein
           [Chlamydophila psittaci RD1]
 gi|325506711|gb|ADZ18349.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci 6BC]
 gi|328814762|gb|EGF84752.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci Cal10]
 gi|328915053|gb|AEB55886.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci 6BC]
          Length = 458

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 161/358 (44%), Gaps = 20/358 (5%)

Query: 14  QGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSI 71
           Q  NS L +Y H PFC   C YC  +  + R +   E +I + + EM+++  L  G R  
Sbjct: 44  QKDNSPLSLYFHIPFCQSMCLYCGCSVVINRREDIVEKYIDTLIKEMEYVHTLLGGRRKT 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAG 129
           S I FGGGTPS +  +    +   I + + +S   EI IE +P S+  ++ +    +  G
Sbjct: 104 SRIHFGGGTPSRLSRKLFETLFSHIHRLFDLSEAEEIAIEFDPRSLRDDDKKAEFIQSLG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   + 
Sbjct: 164 FNRVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFT 223

Query: 189 MELQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITS 244
             +   L    D L+L+   ++       K  K+ D+    E  A+  Y    LT++   
Sbjct: 224 QTIADILHMRPDRLALFSFASVPWIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQ 283

Query: 245 AHGLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
           A GL  + +       A     L  N+  Y      D IG+G  + S ++     + +  
Sbjct: 284 AIGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMSSTSFIR----GIYLQN 339

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            K  ES+ + +     A V+ + LS + +  ++++  L     +S +++  L G   D
Sbjct: 340 AKTLESYHEKILSGSLATVKSKILSEDDKIRKWVIHKLMCTFVVSKEEFTQLFGYCFD 397


>gi|296133429|ref|YP_003640676.1| Coproporphyrinogen dehydrogenase [Thermincola sp. JR]
 gi|296032007|gb|ADG82775.1| Coproporphyrinogen dehydrogenase [Thermincola potens JR]
          Length = 500

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 158/337 (46%), Gaps = 26/337 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           +   ++ +YV  PFC  +C YC F ++ V +Y      F+ +   E+  +          
Sbjct: 164 EAEQTVSLYVGIPFCPTRCAYCSFPAYPVSKYAGMIAPFVVALKKEIAGIAGFLRAEGWQ 223

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
           + +I+ GGGTP+ +E + ++ +L+ + K    ++  EIT+EA  P ++        RK G
Sbjct: 224 VQTIYLGGGTPTALEEKILSELLESLDKAIPFTTVREITLEAGRPDTLTREKLAVSRKLG 283

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V R+S+  QS+  ++L  +GR H   +  +A  +AR   F  ++ D+I  LP +T    E
Sbjct: 284 VTRLSINPQSMNPRTLNNIGRLHTPEDIESAFKMARQAGFNNINMDIIIGLPGETAPDVE 343

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L +    A ++L+++ L +++ +   +  +  +  LP E     +  +T+  T   G+
Sbjct: 344 NTLLKIEPLAPENLTVHTLAVKRASQIRENRERYE--LPEETEITKMLAITEEYTEKWGM 401

Query: 249 HAYEISNHSFL------------GAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAI 295
           H Y +    ++            G + ++N+         IG+G GA S+    +     
Sbjct: 402 HPYYLYRQKYMVGPTENRGYAVEGYDCIYNIQVIEERQTIIGLGAGAGSKFVNPADWTLT 461

Query: 296 SI--EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
           ++   K PE+++  V +    ++EK+    EQ  +++
Sbjct: 462 NLYNPKDPEAYINRVDE----LLEKKISRLEQVKNKY 494


>gi|149189564|ref|ZP_01867847.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148836543|gb|EDL53497.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 454

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 9/286 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + +      + + Q+ + E++   Q  L     I +++FGG
Sbjct: 59  VYIHIPFCETHCTFCGFYQN-KYVSTAADRYAQALIQEIKMEAQSPLHQSAPIHAVYFGG 117

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +   ++A I+  + +   ++ + EITIE    +   +       AGVNR SLG+Q
Sbjct: 118 GTPTALNASDLANIVKTLREELPLAPDCEITIEGRVLNFTDDKISSCIDAGVNRFSLGIQ 177

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +    + L R     EA   +  L       +  DL++ LP Q++  W+ +L  A   
Sbjct: 178 TFDSNIRKRLSRTSTGDEAQTFLRKLVETEQAAIVCDLLFGLPNQSLESWQRDLDIAHDI 237

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T+  K   +  + +P+     DLY          G H   ISN  
Sbjct: 238 GLDGVDLYALNVLPNTILGKAAANNRVDIPTPAQCRDLYLHGSEYLDQLGWHT--ISNSH 295

Query: 258 FLGA---ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           F       +L+NL      D +  G  +   +   S+ V  ++E +
Sbjct: 296 FARTTRERNLYNLLIKEGADCLAFGSCSGGSINGYSYMVERNLESY 341


>gi|86747291|ref|YP_483787.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris HaA2]
 gi|86570319|gb|ABD04876.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris HaA2]
          Length = 474

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 10/214 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
            YVH PFC   C +C F  +V R + G   ++   L E+  +    L     I +++ GG
Sbjct: 83  AYVHVPFCQTHCLFCGFFQNVWRAEAGPA-YVDDVLAELAARSSTPLIASAPIDAVYLGG 141

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A +++G+ +   ++S+ EIT+E      ++   +    AGV R+S+GVQ
Sbjct: 142 GTPSALAADDLARLVEGLRRYLPLTSDCEITLEGRGFGFDLAKAEKVADAGVTRLSIGVQ 201

Query: 139 SLEEQSLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +   Q  R LGR     E  +     + L R     +  DLIY LP QT   W  +++  
Sbjct: 202 TFSTQVRRRLGRKLAGPEVQSFLADLVALGRTA---VVCDLIYGLPGQTDDIWANDIEIV 258

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
               +D ++LY L +  G    +  ++G L  P+
Sbjct: 259 DRLGLDGVTLYALNMFPGGPMARAIENGKLAPPA 292


>gi|308388584|gb|ADO30904.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha710]
          Length = 493

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           KY+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 71  KYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 130

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 131 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 190

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 191 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 250

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 251 PHQTSESIKTTIDTVLSLDPDRLALYH 277


>gi|28212117|ref|NP_783061.1| coproporphyrinogen III oxidase [Clostridium tetani E88]
 gi|28204560|gb|AAO36998.1| putative oxygen-independent coproporphyrogen III oxidase
           [Clostridium tetani E88]
          Length = 439

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 139/285 (48%), Gaps = 22/285 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            + S++L +Y+H PFC+ KC YC+  S     K     ++   + E++ ++ +   R  S
Sbjct: 41  NRKSDNLTLYIHIPFCLNKCGYCNLFSTTDFNKDKMSKYVNKLIEEIKAVKNILDLRKES 100

Query: 73  ---SIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKA 128
              S+ FGGGTP+ +    +  +L  I K+  +    +  ++E +P+++        +K 
Sbjct: 101 VFYSVIFGGGTPTALPKDLMEKLLIVIEKDLNIDFKKIFFSMETSPNTMNKEYIDLLKKF 160

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR--NIFPRMSFDLIYALPKQTMTQ 186
            +NRIS+G+QS +E  L+ + R    +    ++ L +  NI  + + DLIY +P Q+M  
Sbjct: 161 HINRISMGIQSFKECELKEICRFETVNNINKSLELMKKENIEIK-NLDLIYGIPSQSMES 219

Query: 187 WEMELQRALSYAVDHLSLYQLTI-EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +   L+R + Y  + + +Y L I EK  L+ K  +D        N   ++Y L +     
Sbjct: 220 FMDSLKRVIEYRPEEIFIYPLYIREKTKLYEKYKRDF-------NKMTNMYELAKDELIK 272

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRY----GDYIGIGPGAHSRV 286
           +G    + S  +F+  E ++   Y  Y     + IGIG GA S +
Sbjct: 273 NGY--IQTSMRNFI-REDMNEKLYPSYSCQENEMIGIGCGARSYI 314


>gi|326201902|ref|ZP_08191772.1| Coproporphyrinogen dehydrogenase [Clostridium papyrosolvens DSM
           2782]
 gi|325987697|gb|EGD48523.1| Coproporphyrinogen dehydrogenase [Clostridium papyrosolvens DSM
           2782]
          Length = 497

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 160/330 (48%), Gaps = 24/330 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           T    NS+ +YV  PFC  +C YC F+S  + +YK     ++ + L E++   QL   + 
Sbjct: 165 TESRENSISLYVGIPFCPTRCLYCSFSSSTISQYKKMVGVYVDTLLKEIRHTAQLMREKG 224

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             + SI+ GGGTP+ +  + ++ +L GI +   ++   E T+EA  P ++ +   +  + 
Sbjct: 225 LVVESIYIGGGTPTSLNERQLSRLLSGIEECIDMTYLREYTLEAGRPDTITIEKLKVIKN 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           + V+RIS+  Q++ E++L  +GR H   + + A   +R++ F  ++ DLI  LP + +  
Sbjct: 285 SRVSRISINPQTMNEKTLERIGRFHTPEDVVNAFKASRDMGFDNINMDLICGLPGEDVEM 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L++      D L+++ + I++ +   K  +   L     + A+ + ++ +  +   
Sbjct: 345 FGETLRKIKELNPDSLTVHTMAIKRASQLTKEIEKYSLKTQYVDSAL-MVDMARECSKEM 403

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV 293
            L+ Y            E   +S +G E L+N+        I   G GA ++V    +R+
Sbjct: 404 SLNPYYLYRQKNILGNLENVGYSKIGMECLYNIQIMEERQTILACGAGAVTKVVFPMNRL 463

Query: 294 -----AISIEKHPESWLKMVRKNGHAVVEK 318
                  S+E++     +M+ +  + ++E+
Sbjct: 464 ERSFNVKSVEEYIGRIDEMLERKANILMEE 493


>gi|225026137|ref|ZP_03715329.1| hypothetical protein EUBHAL_00378 [Eubacterium hallii DSM 3353]
 gi|224956542|gb|EEG37751.1| hypothetical protein EUBHAL_00378 [Eubacterium hallii DSM 3353]
          Length = 489

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 20/282 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC   C YC F S  V R+      ++ +   E+ ++ +    + +++I+ GGG
Sbjct: 176 LYIGIPFCPTTCLYCSFTSFPVSRFGDRMRAYLDALYKELAFVAKHHRDKKLTTIYIGGG 235

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ ++ + ++ +++ I + + V  + E T+E+  P S+    F+  ++AGV RIS+  Q
Sbjct: 236 TPTALDEECLSKLMNMIHELFPVEESEEFTVESGRPDSITKEKFRILKEAGVTRISINPQ 295

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR H   +   A  LAR   F  ++ D+I  LP ++++     L      
Sbjct: 296 TMHQETLDLIGRAHTVEQTKEAFLLARECGFDNINMDIITGLPGESLSYVHETLDEIFKL 355

Query: 198 AVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY----- 251
             + L+++ L I++   L  +M K   +V  S N   ++  L     S  G+ AY     
Sbjct: 356 RPESLTVHSLAIKRAAHLNIEMEKYQGMVKGSTN---EMLRLVDEYASNMGMEAYYMYRQ 412

Query: 252 -------EISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSR 285
                  E   +     E L+N L      D I  G GA S+
Sbjct: 413 KNIPGNLENIGYCVPDKECLYNILIMEEKQDIISCGAGASSK 454


>gi|330815770|ref|YP_004359475.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia gladioli BSR3]
 gi|327368163|gb|AEA59519.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia gladioli BSR3]
          Length = 463

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 147/354 (41%), Gaps = 19/354 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +YVH PFC   C YC  N    R +     ++     E+    +   P R I
Sbjct: 51  GAASSELSLYVHIPFCATACFYCGCNRIATRNRAHARPYLDRLKRELALQARCFDPDRVI 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +    +A ++     ++ ++  S  EI+IE +P +         R  G
Sbjct: 111 TQLHWGGGTPTFLSDAQMAELMAATRAHFPIAADSESEISIEVDPRTATPATLAHLRMQG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ ++ +  R + R        + I  AR + +  +S DLIY LPKQT+  + 
Sbjct: 171 FNRLSLGVQDVDPEVQRAVNREQPIELTASLISAARLVGYRSVSVDLIYGLPKQTVETFA 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLT-QSITSAH 246
             L   +  A D +S++          +KM +  D   LP     V L  L  +++T A 
Sbjct: 231 RTLAAVIELAPDRISVFGYA--HLPQLFKMQRRIDAAGLPPPAARVALLGLAIETLTHAG 288

Query: 247 ----GLHAYEISNHSFLGAESLHNLN-----YWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
               G+  +   +   + A+    L      Y    D   IG G  S  KVG   V    
Sbjct: 289 YIYIGMDHFARPSDELVAAQRKGTLQRNFQGYSTRADTDLIGVGMSSIGKVGD--VYAQN 346

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            K   +W   +      +     LS+E +    ++M L     +   + E+  G
Sbjct: 347 AKDLAAWGAAIDAGRLPIARGRRLSAEDRLRRDVIMRLMCHATLPFAEIEVTYG 400


>gi|319639248|ref|ZP_07993999.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
 gi|317399432|gb|EFV80102.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
          Length = 473

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALNLRNMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + D I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFDMIRKYFQLIPNGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P Q     +  +   LS   D L+LY
Sbjct: 231 PHQNTESIKTTIDTVLSLNPDRLALY 256


>gi|313897068|ref|ZP_07830615.1| putative coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|312974515|gb|EFR39983.1| putative coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 137 str. F0430]
          Length = 260

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 8/213 (3%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS ++  LR +GR H A EA AA   AR   F  +S DL+Y LP QT+   +  +   +
Sbjct: 1   MQSFDDALLRRIGRVHTAEEARAAFRAARAAGFTNISIDLMYGLPGQTLHDLQESVHAVI 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A +H+S+Y LT+E+GT F      G L LP E  A ++Y+   +   A G   YEISN
Sbjct: 61  ALAPEHISVYGLTVEEGTPFAAAQAAGRLDLPPEETAEEMYDYLMAELPARGYLRYEISN 120

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YWR   Y+G+G  AH  V      V    E+   ++++ V   G  V
Sbjct: 121 FARRGFESRHNLGYWRSVPYLGVGAAAHGYVD----NVRWENERDTAAYIRRVMA-GEDV 175

Query: 316 VEKEFLSSEQQA--DEFLMMGLRLREGISVKDW 346
              E  +  + A  +E+  + LR  EGI   D+
Sbjct: 176 RRAENGARTRTAAMEEYAFLALRTAEGIDEADF 208


>gi|237737986|ref|ZP_04568467.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419866|gb|EEO34913.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 422

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 10/220 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ +   +E     Q T     +   IFFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQLDGSLDSYAEYIASEFDKYGQTTYFKESTFDVIFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +P+ + +IL  I +N  +  N E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPKQLEIILQSIQRNVKLGENYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E+   F  R ++ +E I  +   +N F   +  D+IY  P QT+ +   + +    
Sbjct: 168 QTFSERGRIFYNRTYSKNEVIERLKKLKNFFKGEICIDIIYNFPDQTIEEVIEDARIVKE 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVD 234
             +   S Y L + +G+   K+ KD   + V+  E++  D
Sbjct: 228 LELGSASFYSLMVHEGS---KLSKDIEAEKVIMEEDMKKD 264


>gi|204789668|gb|ACI02044.1| hypothetical protein [uncultured bacterium]
          Length = 334

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 2/168 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G     +Y+  PFC   C YC F S+ + +++   + +I     E+ ++ +    + I +
Sbjct: 150 GDRGYSIYIGIPFCPTTCLYCSFTSNAIAKWRDRVDEYINCLKKEIDYVSEQFADKVIDT 209

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ + P  I  ++  + +   +SS  EIT+EA  P S+  +      + GV R
Sbjct: 210 VYVGGGTPTTLLPYQIDELMSYVREKLDLSSCREITVEAGRPDSITEDKLASLLRNGVTR 269

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           IS+  Q++ +++L+ +GR H+  E   A  LAR  F  ++ DLI  LP
Sbjct: 270 ISVNPQTMNDETLKLIGRAHSVDEFREAFFLARKYFDNINTDLILGLP 317


>gi|283777943|ref|YP_003368698.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
 gi|283436396|gb|ADB14838.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
          Length = 446

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 2/202 (0%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +  ++L +Y+H PFC  +C +C+  ++ +       N++ +   +M+ + +       + 
Sbjct: 46  ESRSALSLYIHIPFCEMRCGFCNLFTYSQPADDWVANYLSALGRQMEVVAEQIPAAQFAQ 105

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +  GGGTP+ ++   +A +L+ + +   V   N+ I++EA+P++ +   F   R  GV R
Sbjct: 106 LALGGGTPTFLQTAELAQLLEQLKRVLDVPLGNLPISVEASPATTDDEKFALLRHYGVTR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS +   L  +GR     +   AI  + R  FP ++ DLIY    QT   W   L
Sbjct: 166 LSLGIQSFDADDLGAIGRPQKHDDVTRAIERIRRAGFPILNLDLIYGGEAQTRRGWLESL 225

Query: 192 QRALSYAVDHLSLYQLTIEKGT 213
           + A  Y  + L LY L +   T
Sbjct: 226 RAAAQYEPEELYLYPLYVRPLT 247


>gi|283782250|ref|YP_003373005.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
 gi|283440703|gb|ADB19145.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
          Length = 436

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           LG+Y+H PFC K+C +C F  +  +     E ++ +   E++ + +L   G R    ++F
Sbjct: 46  LGLYLHIPFCRKRCKFCYFRVYTDKNASDVETYVSALSREIELVSKLPIMGGRPFRFVYF 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + +  ++D +  N       E+T E  P ++        ++ GV R+SLG
Sbjct: 106 GGGTPSFLSAKQLTSLVDRLRANINWDQAEEVTFECEPGTLSQPKIVTLKELGVTRLSLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           V++  +  L   GR H + E   A    +   F  ++ DLI  +  ++   W+  +++ +
Sbjct: 166 VENFSDAVLEENGRAHLSGEVYKAWDWIKAADFANVNIDLISGMVGESWDNWQENIKKTI 225

Query: 196 SYAVDHLSLYQLTIEKGTLFYK 217
             + D +++YQL +   T++ K
Sbjct: 226 ELSPDSVTIYQLELPFNTVYSK 247


>gi|193222329|emb|CAL61807.2| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Herminiimonas arsenicoxydans]
          Length = 485

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 5/240 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL       T  G   L +YVH PFC   C YC  N  V R +     ++     E++  
Sbjct: 49  YLQTVVGLRTRGGMWPLSLYVHIPFCESVCHYCSCNKVVTRDRSKAATYLSYLKHEIEMQ 108

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEV 119
             L  G   I  +  GGGTP+ +    +  ++  + +++  +S+   E  IE +P +V V
Sbjct: 109 GNLFAGMNQIEKLHIGGGTPTYLNDAQMGELMAHLRRHFRFASDFDGEYAIEVDPRTVTV 168

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
                 RK G NRIS+GVQ  +    + + R  +  + +  I  AR   F  +S DLIY 
Sbjct: 169 ERIHALRKQGFNRISIGVQDFDPDVQQAVNRIQSEQDTLNIIRAAREACFRSVSIDLIYG 228

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQ +      L + ++ + D +++Y   + +  +F    +  +  LPS +  +++++L
Sbjct: 229 LPKQNVITMAQTLNKVINASPDRIAVYNY-VHRPNMFKPQRRIDEDDLPSLDARLNMFSL 287


>gi|157364103|ref|YP_001470870.1| coproporphyrinogen dehydrogenase [Thermotoga lettingae TMO]
 gi|157314707|gb|ABV33806.1| Coproporphyrinogen dehydrogenase [Thermotoga lettingae TMO]
          Length = 409

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 7/208 (3%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL  Y N+   +G  S+ +Y+H PFC+K C +C  N   R      E++ +  L E+Q  
Sbjct: 25  YLHDYLNDQNLEGKKSV-IYIHVPFCLKTCTFCSMN---RSQVAPPEDYHRLILKEIQMY 80

Query: 63  RQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     +  +++FGGGTP+ +    +  I+  +  N+ ++ + EITIE + + +  +
Sbjct: 81  SKFSYIEKSTFDAVYFGGGTPTTLRSDALREIIVAVKDNFNLTPDAEITIETSVTELSDD 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
             + +++ GVNR S+GVQ+  +   +   R          +  L R  F  ++ D+IY+ 
Sbjct: 141 KIELFKQTGVNRFSIGVQTFSDMGRKIFNRRGLGEWVKERLKFLKRMNFASVNIDIIYSY 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQL 207
           P Q++ +   +L+      +D  S+Y L
Sbjct: 201 PGQSLEELRKDLRTIYELDLDGFSMYSL 228


>gi|331655124|ref|ZP_08356123.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
 gi|331047139|gb|EGI19217.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
          Length = 445

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFDEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +     G   AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDGCLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|261363767|ref|ZP_05976650.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           ATCC 25996]
 gi|288568345|gb|EFC89905.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           ATCC 25996]
          Length = 473

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y++A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYINALNQRSMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    I  +   I K++ +  + E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFQLIPSGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYDETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT    +  +   LS   D L+LY
Sbjct: 231 PHQTAESIKTTIDTVLSLDPDRLALY 256


>gi|255532384|ref|YP_003092756.1| coproporphyrinogen III oxidase [Pedobacter heparinus DSM 2366]
 gi|255345368|gb|ACU04694.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           heparinus DSM 2366]
          Length = 454

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 41/333 (12%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIF 75
           + + +Y+H PFC   C YC  N+ + +    ++ ++ + L E Q +++Q      I  + 
Sbjct: 51  DGISLYIHLPFCESLCTYCGCNTRITKNHQVEKPYVDTLLKEWQLYLKQFKTKPLIRELH 110

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+    QN+  ++ GI K+  V  +   + EA+P++    +     + G  R+SL
Sbjct: 111 LGGGTPTFFNAQNLEFLIKGILKDAVVHKDAAFSFEAHPANTTTEHLITLNQLGFTRLSL 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  + +    + R     +       AR N +  +++DLIY LP Q+ +     ++  
Sbjct: 171 GIQDFDPRVQLIINRVQTVEQVEQISRKARENGYKSLNYDLIYGLPHQSFSGLADTIEEV 230

Query: 195 LSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT-----SA 245
           L    D ++ Y       ++ G    + + + D  LP+     +LY L + +      + 
Sbjct: 231 LRLRPDRIAFYSYAHVPWVKPGQ---RRYTESD--LPAPESKEELYKLGRKLLKEGGYTE 285

Query: 246 HGLHAYEISNHSFLGAE---SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE---- 298
            G+  + ++  S   A+   SLH  N+  Y D        +SR+ +G    AIS      
Sbjct: 286 IGMDHFTLTTDSLYEADQKGSLHR-NFMGYTD-------QYSRLTIGLGVSAISDSWNAF 337

Query: 299 ----KHPESWLKMVRK------NGHAVVEKEFL 321
               K  E++  MV K       GH + E + L
Sbjct: 338 AQNVKTVETYTDMVNKGLFPVFKGHLLTETDLL 370


>gi|319650177|ref|ZP_08004324.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
 gi|317398109|gb|EFV78800.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
          Length = 504

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 143/292 (48%), Gaps = 27/292 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEM----QWMRQLTGPRS 70
            N + +Y+  PFC  KC YC F ++    + G  N F+     EM    +W+++      
Sbjct: 170 KNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVNSFLGGLHFEMRKIGEWLKE--NDVK 227

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKA 128
           I+++++GGGTP+ I  + + ++ + +  ++    N+ E+T+EA  P ++     +  +K 
Sbjct: 228 ITTVYYGGGTPTSITAEEMDMLYEEMYDSFPDVENIREVTVEAGRPDTITPEKLEVLKKW 287

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            ++RIS+  QS  +++L+ +GR+H   E +   HLARN+    ++ DLI  LP + + ++
Sbjct: 288 NIDRISINPQSYIQETLKAIGRHHTVEETVDKFHLARNMGMNNINMDLIIGLPGEGVPEF 347

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSAH 246
              L        + L+++ L+ ++ +   +M K+      +E   ++ + ++ +  T  H
Sbjct: 348 SHTLDETEKLMPESLTVHTLSFKRAS---EMTKNKQKYKVAEREEIEKMMDMAEDWTKQH 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR 285
             H Y            E   ++    ES++N+         IG+G GA S+
Sbjct: 405 NYHPYYLYRQKNILGNLENVGYALPNQESIYNIMIMEEQQTIIGLGCGASSK 456


>gi|152990113|ref|YP_001355835.1| coproporphyrinogen III oxidase [Nitratiruptor sp. SB155-2]
 gi|151421974|dbj|BAF69478.1| oxygen-independent coproporphyrinogen III oxidase [Nitratiruptor
           sp. SB155-2]
          Length = 455

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 22/284 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +Y H PFC   C +C  N      +  +E +I     E+  ++    P R + 
Sbjct: 43  KDETPLSLYFHLPFCRSACYFCGCNVVFTSKEDKKERYISYLQKELDILKNHINPDREVI 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK---NWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + FGGGTP+   P+ +  I+  I +   NW  SS  E++ E +P  +   + Q   + G
Sbjct: 103 QLHFGGGTPTFFSPEQLQRIVASIKEVFGNW--SSEAEVSCEIDPRFLSEEHMQVLSEGG 160

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQ   EQ  + + R  +  E   A+ LAR      ++ DLIY LP QT+  ++
Sbjct: 161 FNRVSFGVQDFNEQVQQAVHRIQSFEETKMAVDLARKYGMQSVNIDLIYGLPFQTLESFK 220

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L   L    D L+++        L   M K  +  LP+ +V + +   T    +++G 
Sbjct: 221 KTLDMTLQLDPDRLAVFNYA-HVPWLKKTMRKIDETTLPTPDVKLQILKYTIDFFTSNGY 279

Query: 249 ------HAYEISNHSFLGAES--LHNLNYWRY-----GDYIGIG 279
                 H  +  +  F   E   LH  N+  Y      D IGIG
Sbjct: 280 KMIGMDHFAKPDDELFRAIEKGELHR-NFQGYTTKGGADLIGIG 322


>gi|294784105|ref|ZP_06749406.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 3_1_27]
 gi|294488175|gb|EFG35520.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 3_1_27]
          Length = 469

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 5/208 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEITGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  +S   E T EA    S+ +   +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMSEVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LP +T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGLPDETTEEILDTLNQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             +Y +D+L+++ L  ++ +  +K +++
Sbjct: 326 LKNYDIDNLTIHCLAFKRASKLFKENQE 353


>gi|218264407|ref|ZP_03478264.1| hypothetical protein PRABACTJOHN_03960 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222010|gb|EEC94660.1| hypothetical protein PRABACTJOHN_03960 [Parabacteroides johnsonii
           DSM 18315]
          Length = 237

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 29/242 (11%)

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            N  P +S DLIY LP QT+ +W+  L  A+   + H+S Y L  E+GT  YK+ + G +
Sbjct: 9   ENGIPNISIDLIYGLPGQTLEEWQENLNDAIHLEIPHISAYHLIYEEGTALYKLMEAGKV 68

Query: 225 VLPSENVAVDLYN-LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
               E ++V L++ L   +  A  LH YEISN +  G  S HN +YW    YIGIGP AH
Sbjct: 69  APIEEELSVTLFSTLINRLAEAGYLH-YEISNFALPGYFSQHNSSYWTGKKYIGIGPSAH 127

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S     S +  IS   H   +L+ +R  G   +E E L    + ++F++ GLR   GI  
Sbjct: 128 S-YDGESRQWNISSLPH---YLEGIR-TGIPNIEIEKLDINTKYNDFIITGLRTMWGI-- 180

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIER------------VQFSRLRCTQRGMTMLDSVIA 391
                   R  +I  +   ++Q ++ER             +   L  ++ G+ + D +++
Sbjct: 181 --------RTANIREQFGEEKQAYLERQAATYLHQGLLIYENDTLTLSKEGIFISDGIMS 232

Query: 392 NL 393
           +L
Sbjct: 233 DL 234


>gi|160934232|ref|ZP_02081619.1| hypothetical protein CLOLEP_03103 [Clostridium leptum DSM 753]
 gi|156866905|gb|EDO60277.1| hypothetical protein CLOLEP_03103 [Clostridium leptum DSM 753]
          Length = 492

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 7/202 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SS 73
           S  +YV  PFC  +C YC F S    R +K+  E ++     E++   Q+    ++   S
Sbjct: 166 SYSLYVSIPFCPTRCSYCSFVSQTIERAHKMIPE-YVARLCEELEKTAQIAHELNLRLES 224

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ +  + + L+L  I +N+  S   E T+EA  P ++     +  ++ GV+R
Sbjct: 225 VYIGGGTPTTLTWEQMELLLRTIRRNFDFSCCREFTVEAGRPDTITPEKLKAMKRYGVDR 284

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  Q+L +  L  +GR H+A + I A  LAR   F  ++ DLI  LP  ++T ++  +
Sbjct: 285 ISINPQTLNDGVLELIGRKHSARQTIDAFKLARKEGFHHINMDLIAGLPGDSLTSFQNTI 344

Query: 192 QRALSYAVDHLSLYQLTIEKGT 213
           Q       + ++++ L ++K +
Sbjct: 345 QGICQLDPESVTIHTLAMKKSS 366


>gi|126656745|ref|ZP_01727959.1| hypothetical protein CY0110_23941 [Cyanothece sp. CCY0110]
 gi|126621965|gb|EAZ92673.1| hypothetical protein CY0110_23941 [Cyanothece sp. CCY0110]
          Length = 487

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 10/250 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           + T      L +YVH PFC KKC +C +   +      ++ ++ +   EM    +  G  
Sbjct: 68  DYTTPTDGLLDIYVHIPFCEKKCVFCHYPVKLGEQSSEKDRYLDALEKEMDLYLRRLGLE 127

Query: 70  SIS--SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQ 123
            I   SI  GGGTP+ +    +   LD       VS+  +   + +P ++         +
Sbjct: 128 QIKARSILVGGGTPTFLTLDQLRRFLDSFVTRVDVSTCTQFNYDVDPVTLIGPEGEERLR 187

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             R  GV+R+++G+QSL    L+ + R+H   EA+ +I  A+    ++  + I+  P +T
Sbjct: 188 IMRDYGVDRLTIGIQSLNADILKMMNRHHGVEEALLSIENAKKFGYQVDIEFIFGYPGET 247

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEK-GTLFYKM---HKDGDLVLPSENVAVDLYNLT 239
           +  W   +++A+S  V+ + LY+L +E  G    K+    + G    PS   ++ +  + 
Sbjct: 248 LDNWIDVVEQAVSLGVEEIQLYRLKVEAYGDYQAKIKAVKERGLQAFPSVEESIMMKQIA 307

Query: 240 QSITSAHGLH 249
             I +A+G H
Sbjct: 308 IDILNANGYH 317


>gi|293604687|ref|ZP_06687087.1| oxygen-independent coproporphyrinogen III oxidase [Achromobacter
           piechaudii ATCC 43553]
 gi|292816856|gb|EFF75937.1| oxygen-independent coproporphyrinogen III oxidase [Achromobacter
           piechaudii ATCC 43553]
          Length = 476

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +YVH PFC   C YC  N  V R+      ++ +   E+   + +L     +S + FG
Sbjct: 71  LSLYVHIPFCDSVCYYCACNKVVTRHHDRAARYLDALTREITMHVEELGAGVPVSQLHFG 130

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +A ++  +   +  S++ EI+IE +P +         R+ G NR+S GV
Sbjct: 131 GGTPTFLSDAELARLMQDLRAGFRFSADAEISIEVDPRTATPERLAHLRRLGFNRLSFGV 190

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +E+  + + R  +  +  A +  AR++ +  ++ DLIY LP QT   +   +++ ++
Sbjct: 191 QDFDERVQKAVHRVQSFEDVRALMQSARSLGYESVNMDLIYGLPLQTTESFARTIKQVVA 250

Query: 197 YAVDHLSLY 205
              D ++LY
Sbjct: 251 LRPDRIALY 259


>gi|296332403|ref|ZP_06874864.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673684|ref|YP_003865356.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296150321|gb|EFG91209.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305411928|gb|ADM37047.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 501

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 27/294 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------ 67
           Q  + + +Y+  PFC  KC YC F ++  +   GQ   + SFL  + +  Q  G      
Sbjct: 166 QVKDEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKEH 222

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGY 125
              +++I+FGGGTP+ I  + + L+ + + +++    N+ EIT+EA  P ++        
Sbjct: 223 DVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVL 282

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTM 184
            K  ++RIS+  QS E ++L+ +GR+H   E I   HL+ R+    ++ DLI  LP + +
Sbjct: 283 NKYDIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRRHGMNNINMDLIIGLPGEGV 342

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            ++   L        + L+++ L+ ++ +   + +K    V   E V+  + +   + T 
Sbjct: 343 KEFRHSLSETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVAGREEVS-QMMDDAVAWTK 400

Query: 245 AHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
            HG   Y            E   +S  G ES++N+         IGIG GA S+
Sbjct: 401 EHGYAPYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASK 454


>gi|332975140|gb|EGK12042.1| oxygen-independent coproporphyrinogen III oxidase 2 [Desmospora sp.
           8437]
          Length = 505

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 151/322 (46%), Gaps = 33/322 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ----WMRQLTGPRS 70
              + +Y+  PFC  KC YC F ++  R + G  E F+     EM+    W++    P  
Sbjct: 170 DREVSLYIGIPFCPTKCAYCTFPAYAIRGRNGSVEEFLAGLHEEMEAIGAWLKSRGLP-- 227

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKA 128
           +++I+FGGGTP+ I  + +  +   +         V E+T+EA  P +++V      R+ 
Sbjct: 228 VTTIYFGGGTPTSITARQMDDLFVKMKTAIPGYGGVRELTVEAGRPDTLDVEKLDLLRRW 287

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            V+RIS+  QS EE +L+ +GR+H   E +    LAR++    ++ DLI  LP +    +
Sbjct: 288 KVDRISINPQSFEENTLKLIGRHHTVQETLEKYELARSMGLHNINMDLIIGLPGEGPDTF 347

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
              L+       + L+++ L+ ++G+   +    +K  D      +   ++ N  ++ T 
Sbjct: 348 RQSLRMMEELKPESLTVHTLSFKRGSHMTRNPEKYKTAD-----RDQITEMVNDARAWTR 402

Query: 245 AHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR-VKVGS 290
             G   Y            E   ++F G ESL+N+         IG+G GA S+ +  G+
Sbjct: 403 RMGYVPYYLYRQKNILGNQENVGYAFPGEESLYNIIIMEERQTIIGLGCGAVSKIIPPGT 462

Query: 291 HRV-AISIEKHPESWLKMVRKN 311
            R+      K P++++   R++
Sbjct: 463 DRIHRFPNPKEPQAYIDTYREH 484


>gi|218551137|ref|YP_002384928.1| coproporphyrinogen III oxidase [Escherichia fergusonii ATCC 35469]
 gi|218358678|emb|CAQ91332.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Escherichia fergusonii ATCC 35469]
          Length = 416

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 11/205 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  S         +N+I++ + + + M+    P   +S   GGGT
Sbjct: 46  LYIHMPFCQSRCGFCNLFSCTGADNAFIDNYIEAIIVQARQMQ--LAPVDWASFTIGGGT 103

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    ++ +   +     V + +   IE +PS           +  VNR+S+G+QS 
Sbjct: 104 PLLLNVGQLSRLFSRVFDELQVDAQIFKAIETSPSDTTAEKVALLCQLAVNRVSIGIQSF 163

Query: 141 EEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R H+A  A  A+ L  R  FP ++ D+IY +P QT T     L +AL Y  
Sbjct: 164 NDLELATLHRRHSAENAHRALELLRRGNFPILNIDIIYGIPGQTATSLMASLNQALDYQP 223

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D L LY L        Y M +  D+
Sbjct: 224 DELFLYPL--------YNMPRQPDM 240


>gi|313896906|ref|ZP_07830453.1| radical SAM domain protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312974353|gb|EFR39821.1| radical SAM domain protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 551

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 23/285 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           T   ++    Y+H PFC KKC YC F  +  + +     ++   L E+    +       
Sbjct: 65  TPDPADERAAYIHIPFCDKKCSYCGFFQNYTKEEAAH-RYVDVLLQELDAAAETPYVQGA 123

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++FFGGGTP+ +   ++  ++  + +   ++S+ EIT+E     +  +  +   +AG
Sbjct: 124 PFQAVFFGGGTPTALSDADLTRLVRAVRERLPLTSDAEITLEGRIHDLTESKVEAAMRAG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
           VNR SLGVQS + +  + +GR  +    +A +  +       +  DLIY LP Q+   WE
Sbjct: 184 VNRFSLGVQSFDTRVRQSIGRIDDHDTVVATLRRMVEKQGAVVIADLIYGLPYQSPEVWE 243

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLP-----SENVA-----VDLYN 237
            +++      +    LYQL +   +      K GDL +LP     SE  A     VD   
Sbjct: 244 NDVRTQFEIGIAGGDLYQLNVFPASELAARIKSGDLPMLPTTEEQSEYFARGIAIVDTNP 303

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           + + I + H       ++H      SL+N    R  D +  G GA
Sbjct: 304 MARRIDTTHW-----ATDHR---ERSLYNTLAKRGDDILAFGSGA 340


>gi|220929367|ref|YP_002506276.1| coproporphyrinogen III oxidase [Clostridium cellulolyticum H10]
 gi|219999695|gb|ACL76296.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 504

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 160/325 (49%), Gaps = 22/325 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--S 72
           +NS+ +Y+  PFC  +C YC F+S  + +YK   + ++ + L E++    L   + +   
Sbjct: 176 NNSISLYIGIPFCPTRCLYCSFSSSTIAQYKKMVDVYVDTLLKEIKHTALLMESKGLVAE 235

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           SI+ GGGTP+ +  + ++ +L+GI +   ++   E T+EA  P ++ ++  +  + + V+
Sbjct: 236 SIYIGGGTPTSLNERQLSRLLNGIEECIDMTYLREYTLEAGRPDTITIDTLKIIKNSRVS 295

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  Q++  ++L  +GR H   + + A + AR++ F  ++ DLI  LP + +  ++  
Sbjct: 296 RISINPQTMNAKTLVRIGRLHKPEDVVKAFYAARDMGFDNINMDLICGLPGENVRMFDDT 355

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA--VDLYNLTQSITSAHGL 248
           L++      D L+++ + I++ +   +  ++  L     + A  VD+  +          
Sbjct: 356 LRKIKQLNPDSLTVHTMAIKRASQLTREMENYSLETQYVDSASMVDMARICAKEMDLAPY 415

Query: 249 HAYEISN---------HSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV----- 293
           + Y   N         +S  G E L+N+        I   G GA ++V    +R+     
Sbjct: 416 YLYRQKNILGNLENVGYSRKGLECLYNIQIMEERQTILACGAGAVTKVIFPMNRIERSFN 475

Query: 294 AISIEKHPESWLKMVRKNGHAVVEK 318
             S+E++     +M+ +  + ++E+
Sbjct: 476 VKSVEEYIGRIDEMLERKANILIEE 500


>gi|154685441|ref|YP_001420602.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42]
 gi|154351292|gb|ABS73371.1| HemZ [Bacillus amyloliquefaciens FZB42]
          Length = 500

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 27/291 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRS 70
           + + +Y+  PFC  KC YC F ++  +   GQ   + SFL  + +  Q  G         
Sbjct: 170 DEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKRHDIK 226

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKA 128
           +++I+FGGGTP+ I  + + L+ + + +++   +N+ EIT+EA  P ++         K 
Sbjct: 227 VTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVANIREITVEAGRPDTITEEKLAVLNKY 286

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
            ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP +   ++
Sbjct: 287 KIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRKHGMNNINMDLIIGLPGEGTAEF 346

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+       + L+++ L+ ++ +   + +K    V   + V+  + +  +  T  HG
Sbjct: 347 RHSLEETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVADRQEVSRMMDDAVR-WTKEHG 404

Query: 248 LHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
              Y            E   +SF G ES++N+         IGIG GA S+
Sbjct: 405 YTPYYLYRQKNILGNLENVGYSFPGQESIYNIMIMEEVQTIIGIGCGAASK 455


>gi|328911014|gb|AEB62610.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus amyloliquefaciens LL3]
          Length = 522

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 31/293 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQ----WMRQLTGP 68
           + + +Y+  PFC  KC YC F ++  +   GQ   + SFL     EMQ    W++Q    
Sbjct: 192 DEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKQ--HD 246

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYR 126
             +++I+FGGGTP+ I  + + L+ + + +++    N+ EIT+EA  P ++         
Sbjct: 247 IKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREITVEAGRPDTITEEKLAVLN 306

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
           K  ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP +   
Sbjct: 307 KYKIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRKHGMNNINMDLIIGLPGEGTA 366

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           ++   L        + L+++ L+ ++ +   + +K    V   + V+  + +  +  T  
Sbjct: 367 EFRHSLDETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVADRQEVSRMMDDAVR-WTKE 424

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           HG   Y            E   +SF G ES++N+         IGIG GA S+
Sbjct: 425 HGYTPYYLYRQKNILGNLENVGYSFPGQESIYNIMIMEEVQTIIGIGCGAASK 477


>gi|224824737|ref|ZP_03697844.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
 gi|224603230|gb|EEG09406.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
          Length = 469

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 153/382 (40%), Gaps = 37/382 (9%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SI 71
           G  S  + +YVH PFC   C YC  N  + + K   + ++     E+  +  + G R  +
Sbjct: 58  GANSRPISLYVHLPFCNTVCYYCGCNKIITKDKSRADRYLDYLEKEVGLVADVLGQREKV 117

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             + FGGGTP+ +  + +  ++  +   +   +  E +IE +P  V  +      + G N
Sbjct: 118 IQLHFGGGTPTFLSDEQLERLMGILRTRFEFLAEGEYSIEIDPRKVTRDTVLHLARLGFN 177

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQ  E +  + + R  +  E    I  AR   F  +S DLIY LP QT       
Sbjct: 178 RMSVGVQDFEPRVQQAVNRIQSEEETRVVIDAAREAGFRSVSVDLIYGLPLQTQESVAAT 237

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + ++   D ++LY       T+F    +  +  LP   V +D+          H +  
Sbjct: 238 VDKVIAMGPDRIALYNYA-HLPTVFMPQRRINEADLPLPPVKLDILQ--------HSVEQ 288

Query: 251 YEISNHSFLGAESLHNLN------------------YWRYGDYIGIGPGAHSRVKVGSHR 292
              + + F+G +     +                  Y  + D   IG G  S  KVG   
Sbjct: 289 LSAAGYVFIGMDHFAKPDDDLTVALRQGRLQRNFQGYSTHADCDMIGFGVSSIGKVGP-- 346

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                EK  ES+   + +N   V+    L  +      ++  L  R  +SV+  E + G 
Sbjct: 347 CYSQNEKDLESYYAALDENRLPVLRGMVLDGDDILRRSIIQALMCRFALSVEAIEQVHGI 406

Query: 353 NL------DIECERNLQRQGFI 368
           N       ++   R  Q+QG +
Sbjct: 407 NFAEYFAAEMPAIREFQQQGLL 428


>gi|218707132|ref|YP_002414651.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293407121|ref|ZP_06651045.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298382869|ref|ZP_06992464.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300898197|ref|ZP_07116554.1| radical SAM domain protein [Escherichia coli MS 198-1]
 gi|331665122|ref|ZP_08366023.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
 gi|218434229|emb|CAR15147.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli UMN026]
 gi|291425932|gb|EFE98966.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298276705|gb|EFI18223.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300358113|gb|EFJ73983.1| radical SAM domain protein [Escherichia coli MS 198-1]
 gi|331057632|gb|EGI29618.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
          Length = 445

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  IYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +     G   AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDGCLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|322835530|ref|YP_004215556.1| Radical SAM domain protein [Rahnella sp. Y9602]
 gi|321170731|gb|ADW76429.1| Radical SAM domain protein [Rahnella sp. Y9602]
          Length = 441

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 13/298 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-- 68
           M    +N   VY+H PFC   C +C F  +    +   E +    + E++  ++   P  
Sbjct: 46  MRTLAANKRLVYLHIPFCATHCTFCGFYQNKLEAQA-TEQYCDYLIREIE--QEAGSPLH 102

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               + +++FGGGTP+ +  + +  I+  + ++  ++ + EIT+E    + +        
Sbjct: 103 QSAPVHAVYFGGGTPTALSAKQLHRIITTLRRSLPLAPDCEITVEGRILNFDDERIDACL 162

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMT 185
            AG NR S+G+Q+ + +  + +GR  +  EAI+ +  L       +  DL++ LP+QT  
Sbjct: 163 DAGANRFSIGIQTFDTRIRQRMGRRADRDEAISFLRKLGERDRAAVVCDLMFGLPEQTPE 222

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W  +LQ      +D + LY L +   T   K   +    LP  ++  D Y   ++  + 
Sbjct: 223 SWREDLQIIRDLPLDGVDLYALNLLPSTPLGKAVGNKRTTLPDVSMRRDFYLEGEAFLAR 282

Query: 246 HGLHAYEISNHSF---LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              H  +ISN  +       +L+NL   +  D +  G GA   +   S+  A S+E +
Sbjct: 283 DAWH--QISNSHWARNTRERNLYNLLIKKGADCLAFGSGAGGNLDGQSYMTARSLEAY 338


>gi|260914559|ref|ZP_05921027.1| oxygen-independent coproporphyrinogen III oxidase [Pasteurella
           dagmatis ATCC 43325]
 gi|260631350|gb|EEX49533.1| oxygen-independent coproporphyrinogen III oxidase [Pasteurella
           dagmatis ATCC 43325]
          Length = 462

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++    L   R  + + +GG
Sbjct: 58  LSLYVHIPFCHKLCYFCACNKVITRHQHKADIYLDFLEKEIEMRAPLFKNRITTQVHWGG 117

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +     + ++  + K+++++ N EI+IE +P  +E+      R  G NR+S+GVQ
Sbjct: 118 GTPTYLTEAQSSRLMSMLHKHFSITRNAEISIEIDPREIELPMLDHLRHLGFNRMSMGVQ 177

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +   + + R  +     A +  AR + F   + DLIY LP Q +  +   LQ+ ++ 
Sbjct: 178 DFNKDVQKAVNREQDEQFIEALLKRARELGFQSTNLDLIYGLPLQNVDTFMFTLQKVIAL 237

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 238 NPDRLSVF 245


>gi|194387316|dbj|BAG60022.1| unnamed protein product [Homo sapiens]
          Length = 195

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R +L V SL++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +
Sbjct: 39  RAALYVHSLDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQ 98

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ  L +  DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H 
Sbjct: 99  LQELLHHCDDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQ 158

Query: 251 YEISN 255
           YE+SN
Sbjct: 159 YEVSN 163


>gi|291460953|ref|ZP_06026068.2| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379883|gb|EFE87401.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           periodonticum ATCC 33693]
          Length = 472

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 5/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +YV  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 149 INLYVGIPFCPTKCKYCSFASYEISGGVGRFYNDFVEALLKEIQIIGDFLKTYNKKVSSI 208

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +   +  +K  V+RI
Sbjct: 209 YFGGGTPSTLTETDLERVLKKLLENIDMSDVKEFTFEAGREDSLNIEKLEIMKKYSVDRI 268

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  +          A+N+   ++ DLI  LP++T  +    L +
Sbjct: 269 SLNPQSFNLETLKRVNRRFDRENFDLIFKEAKNLGFIINMDLIIGLPEETTEEILDTLAQ 328

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
             +Y +D+L+++ L  ++ +  +K
Sbjct: 329 LNAYDIDNLTIHCLAFKRASKLFK 352


>gi|307150202|ref|YP_003885586.1| Radical SAM domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306980430|gb|ADN12311.1| Radical SAM domain protein [Cyanothece sp. PCC 7822]
          Length = 481

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 6/205 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPR- 69
           T        VYVH PFC + C +C +   +      +++++Q+   EM  +M++L G + 
Sbjct: 66  TSPSDGLFDVYVHIPFCRRHCTFCHYPVMLGEQTAEKDHYLQALEKEMDIYMKRLGGDKI 125

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP----SSVEVNNFQGY 125
              SI  GGGTP+ +    +   LD   +   +S+  +   + +P     S  +   +  
Sbjct: 126 RARSILIGGGTPTYLSLAQMRRFLDFFVERVDLSTCKQFNYDVDPVTLIGSEGIERLKMM 185

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           R  GV+R+++G+QS  E  L+ +GR+H A EAI +I   +++  +++ + I+    QT+ 
Sbjct: 186 RSYGVDRVTIGIQSFNESVLKKMGRHHGAKEAIESIRNCQDLGFQVNIEFIFGYWGQTLE 245

Query: 186 QWEMELQRALSYAVDHLSLYQLTIE 210
            W   ++ A+S   + + LY+L +E
Sbjct: 246 NWIEVIEEAVSLDTEEIQLYRLKVE 270


>gi|296329187|ref|ZP_06871688.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153543|gb|EFG94360.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 469

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 111/212 (52%), Gaps = 5/212 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  +S   E T EA    S+     +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNAKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGLPEETTEEILDTLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              Y +D+L+++ L  ++ +  +K  ++ +++
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFKESQERNVI 357


>gi|2317920|gb|AAB66374.1| oxygen-indendent coproporphyrinogen III dehydrogenase [Cupriavidus
           necator]
          Length = 491

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 3/246 (1%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y + +    +++L +Y+H PFC   C YC  N  + R       ++     EM  + 
Sbjct: 48  LSLYHDALAACRADALSLYLHIPFCENICYYCGCNKIITRDHGRSARYVNYLGREMALVA 107

Query: 64  QLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
              GPR  +    +GGGTP+ ++P  +  ++  + +++ +++  E +IE +P  V+    
Sbjct: 108 DRLGPRRQVLQSHWGGGTPTFLDPGEMRRVMALLHEHFELAAEGEHSIEIDPRRVDHARM 167

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
               + G NR+SLGVQ  + +  + + R     E  A +  AR + F  +S DLIY LP 
Sbjct: 168 ALLAELGFNRVSLGVQDFDPEVQQAIHRIQPFEETRAVVDAARTLGFRSVSLDLIYGLPH 227

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   T  
Sbjct: 228 QTAARFGRTIDQVLALRPDRLSVYSYA-HLPHVFKPQRRIDENALPPAGEKLDILVSTIE 286

Query: 242 ITSAHG 247
             SA G
Sbjct: 287 RLSAEG 292


>gi|257460981|ref|ZP_05626081.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           gracilis RM3268]
 gi|257441644|gb|EEV16787.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           gracilis RM3268]
          Length = 454

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 27/296 (9%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
             Y N +  Q S++ L +Y H PFC   C +C  N      +   + ++     EMQ + 
Sbjct: 35  DGYLNELKNQKSSTPLSLYFHMPFCRSACYFCGCNVIYTGKRDKMDRYLDYIEREMQILS 94

Query: 64  QLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNN 121
            +  G R +  + FGGGTP+    + +A  +  I K +T  SS  EI+ E +P  +    
Sbjct: 95  GVVDGSRQVVQMHFGGGTPTYFSAEQLARHIKNIKKYFTNFSSEAEISCEIDPRFLNAEQ 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                  G NRIS GVQ  +E+  + + R          I +AR      ++ DLIY LP
Sbjct: 155 LDVLVSNGFNRISYGVQDFDERVQKXIHRIQPFELTRDVIAMARERGIKSINMDLIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLY 236
            Q++  ++  L+ ALS   D  +++       I+K      M K  +  LP   V +++ 
Sbjct: 215 YQSLASFKRTLELALSLDPDRFAIFNYAHVPWIKKS-----MRKFDETTLPEPKVKLEIL 269

Query: 237 NLTQSITSAHGLHAYEISN--------HSFLGAESLHNLNYWRY-----GDYIGIG 279
             T    SA+G     + +        H+ L   SLH  N+  Y      D IGIG
Sbjct: 270 KFTHDFLSANGYEMIGMDHYSKPADELHAALKNGSLHR-NFQGYTTKGGADLIGIG 324


>gi|269120254|ref|YP_003308431.1| coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
 gi|268614132|gb|ACZ08500.1| Coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
          Length = 443

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 166/352 (47%), Gaps = 30/352 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQL------T 66
           +  +++ +Y+H PFC  KC YC+  S    +  G+ E+++   + E++   +        
Sbjct: 41  KDKSNISLYIHIPFCTNKCGYCNLMS-TTCFSAGRLEHYVNKLIEEIKSYGETGILGAGN 99

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGY 125
                SS+  GGGTP++++   +  +L  + +   +   N   ++E +P ++    F   
Sbjct: 100 NKAEFSSVILGGGTPTVLDTGLMEKLLMSLEQYLDIDFENTFFSMETSPKTLSNEYFLLL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +K  +NR+S+GVQS  +  L+ + RN    N   A+  +  + N     + DLIY LP Q
Sbjct: 160 KKYYLNRLSIGVQSFFDNELKAIYRNELKQNIDSALKILFSSENSIEIRNLDLIYGLPGQ 219

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTI-EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           TM  WE  L R +S+  + + +Y L + EK  LF     D DL+         +Y+    
Sbjct: 220 TMKSWEESLCRVISHKPEEIFIYPLYVREKTRLFENYKADHDLM-------GKMYDNAVR 272

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYG----DYIGIGPGAHSRVKVGSHRVAISI 297
           I S +G    + S  +F+ +E + +  Y  Y       +GIG GA S +    +    ++
Sbjct: 273 ILSENGY--IQTSMRNFI-SEGMKDKLYPDYSCQENKMLGIGCGARSYIGNVHYSRKYAV 329

Query: 298 E-KHPESWL-KMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDW 346
           E K+  S +   +++   A  E  + LS E+Q  ++++  +    G + +D+
Sbjct: 330 EDKNINSIIDDYLKEENFAFAEYGYKLSEEEQKIKYILKSILKITGFNTEDY 381


>gi|168184779|ref|ZP_02619443.1| HemN C- region family [Clostridium botulinum Bf]
 gi|182672197|gb|EDT84158.1| HemN C- region family [Clostridium botulinum Bf]
          Length = 461

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQL 65
           +N+     S    +YVH PFC   C  C F +H        + ++ S + E++      L
Sbjct: 46  KNDSVPMNSKQATLYVHVPFCKFICSMCPF-THEPLKPQNLDLYVDSIIKEIELYSSNSL 104

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +    +SSIFFGGGT S++ P++I  IL  +   + + S+ +IT+E +P +V  +     
Sbjct: 105 SKELEVSSIFFGGGTASVLSPKHIDSILKTMKSRFDILSDCDITVECHPMTVGKDYLASL 164

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           +  GVNR++ GVQS  ++++  L  +    ++I  I  A  + F  ++ DL+Y  P Q +
Sbjct: 165 KACGVNRVTFGVQSFNKENIDSLKLHQIPFKSIKVIKNALEVGFKTVAIDLMYNFPNQKI 224

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIE 210
                ++  AL   V  +S Y L  E
Sbjct: 225 EGLAQDINMALDLGVHSISFYALDPE 250


>gi|193213150|ref|YP_001999103.1| coproporphyrinogen III oxidase [Chlorobaculum parvum NCIB 8327]
 gi|193086627|gb|ACF11903.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobaculum
           parvum NCIB 8327]
          Length = 476

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 111/236 (47%), Gaps = 3/236 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           ++ + +Y+H PFC   C +C  N+H       ++ ++ + + E Q ++    G  ++  +
Sbjct: 53  TSGISMYIHIPFCENYCYFCGCNAHRTTDHSFEKPYVDALIKEWQMYLDVFPGKLNVKEL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ + P+NI  +++ + K+     +   + E NP S    + +     G  R+S
Sbjct: 113 HIGGGTPTFLSPENIIRLVETLFKDVNKMDDYIFSFETNPRSTTREHLEALYSVGFRRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       I +AR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 173 FGIQDFDATVQEEINRPQSFELVKEKIDMAREIGFNSINFDLVYGLPKQTLATVTDTIQK 232

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +    D L+ Y        L+    +  +  LP  +V  +LY+  +++  + G H
Sbjct: 233 VMELRPDRLAFYGYG-HNPHLYEGQRRFKEEDLPVGDVKQELYDKGRAMLESIGYH 287


>gi|308172965|ref|YP_003919670.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605829|emb|CBI42200.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552610|gb|AEB23102.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208]
          Length = 500

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 31/293 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQ----WMRQLTGP 68
           + + +Y+  PFC  KC YC F ++  +   GQ   + SFL     EMQ    W++Q    
Sbjct: 170 DEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKQ--HD 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYR 126
             +++I+FGGGTP+ I  + + L+ + + +++    N+ EIT+EA  P ++         
Sbjct: 225 IKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREITVEAGRPDTITEEKLAVLN 284

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
           K  ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP +   
Sbjct: 285 KYKIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRKHGMNNINMDLIIGLPGEGTA 344

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           ++   L        + L+++ L+ ++ +   + +K    V   + V+  + +  +  T  
Sbjct: 345 EFRHSLDETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVADRQEVSRMMDDAVR-WTKE 402

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           HG   Y            E   +SF G ES++N+         IGIG GA S+
Sbjct: 403 HGYTPYYLYRQKNILGNLENVGYSFPGQESIYNIMIMEEVQTIIGIGCGAASK 455


>gi|254447771|ref|ZP_05061236.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
 gi|198262551|gb|EDY86831.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
          Length = 465

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 15/283 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y+H PFC   C YC  N  V         +++    E+    Q     R +  I FG
Sbjct: 54  LSLYLHIPFCHSLCYYCGCNKIVTPDLDKGRAYLEELYQEIALRSQGFARDRLVRQIHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ + P  +  +LD +A+N+   +   +E+ IE +P  V   + +     G NR+S 
Sbjct: 114 GGTPNFLRPHQLREVLDTLARNFHFDLPQEMELGIEIDPRWVSPEDIRELAGYGFNRMSF 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +    R + R  +  +    I +AR    P +S DLIY LP+Q++  ++  L + 
Sbjct: 174 GIQDFDADVQRAVNRLQSFEDVRQLIEMARACHVPSVSVDLIYGLPRQSLDSFKKTLNQV 233

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHA 250
           +  A D +SLY    +       +  +D DL+  S+ + + L  L     + +   G+  
Sbjct: 234 IELAPDRVSLYSYAHMPDKIKSQRFIRDEDLLKGSDKLGLFLMALKHFGDAGYEYIGMDH 293

Query: 251 YEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRV 286
           +   +   + A+   +L  N+  Y      D +G+G  A SR+
Sbjct: 294 FARPDDPLVAAKEEGSLQRNFQGYSTHGGCDIVGMGVSAISRI 336


>gi|229587297|ref|YP_002860335.1| HemN C- region family [Clostridium botulinum Ba4 str. 657]
 gi|229260280|gb|ACQ51317.1| HemN C- region family [Clostridium botulinum Ba4 str. 657]
          Length = 461

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQL 65
           +N+     S    +YVH PFC   C  C F +H        + ++ S + E++      L
Sbjct: 46  KNDSVPMNSKQATLYVHVPFCKFICSMCPF-THEPLKPQNLDLYVDSIIKEIELYSSNSL 104

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +    +SSIFFGGGT S++ P++I  IL  +   + + S+ +IT+E +P +V  +     
Sbjct: 105 SKELEVSSIFFGGGTASVLSPKHIDSILKTMKSRFDILSDCDITVECHPMTVGKDYLASL 164

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           +  GVNR++ GVQS  ++++  L  +    ++I  I  A  + F  ++ DL+Y  P Q +
Sbjct: 165 KACGVNRVTFGVQSFNKENIDSLKLHQIPFKSIKVIKNALEVGFKTVAIDLMYNFPNQKI 224

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIE 210
                ++  AL   V  +S Y L  E
Sbjct: 225 EGLAQDINMALDLGVHSISFYALDPE 250


>gi|225159064|ref|ZP_03725373.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
 gi|224802377|gb|EEG20640.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
          Length = 413

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 12/211 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           L +YVH+PFC  +C +C F  +     ++  ++  ++        + +L       +++F
Sbjct: 16  LAIYVHFPFCGARCSFCPFYRYADPADWRPYRDALLREIDLAAAPLEELPDIEPARAVYF 75

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + +A ++  I +   V+ + EITIE  PSS +       R AG  R SLG
Sbjct: 76  GGGTPSDLPGEALAELIARIRERLPVADDAEITIEGRPSSFDGEKIAVCRAAGATRFSLG 135

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH---------LARNIFPRMSFDLIYALPKQTMTQW 187
           VQ+ +    R +GR  + +  IA +                  +  DLIY LP QT   W
Sbjct: 136 VQTFDGGVRRAVGRRLDTAPLIARLREIGAAAGRAANGEGGAPVIVDLIYGLPGQTDASW 195

Query: 188 EMELQRALS-YAVDHLSLYQLTIEKGTLFYK 217
           E +L+  ++  AV  + LY+L I  G+   +
Sbjct: 196 ERDLETVIAERAVSGVDLYRLKIFPGSPLAR 226


>gi|213025130|ref|ZP_03339577.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 127

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 1/125 (0%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           ++Q  L+++         R + +IF GGGTPSL+    +  +LDG+     ++++ EIT+
Sbjct: 1   YVQHLLSDLDADVAWAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLNLAADAEITM 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           EANP +VE + F  Y++AGVNRIS+GVQS  E  L+ LGR H   EA+ A  LA  +  R
Sbjct: 61  EANPGTVEADRFIDYQRAGVNRISIGVQSFSEPKLKRLGRIHGPQEAMRAARLANGLGLR 120

Query: 171 MSFDL 175
            SF+L
Sbjct: 121 -SFNL 124


>gi|149183016|ref|ZP_01861471.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
 gi|148849300|gb|EDL63495.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
          Length = 450

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 110/204 (53%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++     +G++  + SFLT + +  Q TG         I+
Sbjct: 126 ISIYIGIPFCPTKCAYCTFPAYAI---LGKQGRVDSFLTGLHYEIQETGRWLKENGVKIT 182

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + L+ + + +++     V E+T+EA  P ++  +  +   K  +
Sbjct: 183 TIYYGGGTPTSITAEQMDLLYEEMYRSFPDVDQVREVTVEAGRPDTITPDKLEVLNKWNI 242

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS   ++L+ +GR+H+  E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 243 DRISINPQSYTNETLKAIGRHHSVEETIEKFHLAREMGMKNINMDLIIGLPGEGVDEFSH 302

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 303 SLNETEKLMPESLTVHTLSFKRAS 326


>gi|121997193|ref|YP_001001980.1| coproporphyrinogen III oxidase [Halorhodospira halophila SL1]
 gi|121588598|gb|ABM61178.1| coproporphyrinogen III oxidase, anaerobic [Halorhodospira halophila
           SL1]
          Length = 452

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 4/211 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGG 78
            YVH PFC   C YC F  H R        +I   + E++    + L G R I +++ GG
Sbjct: 60  AYVHIPFCRGNCLYCGFYRH-RSAAPRLSRYIDWLIEEIRLDAGQPLVGERPIQAVYLGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +++A +L+ + +   ++++ EIT+EA    +     +     GVNR+S+GVQ
Sbjct: 119 GTPSDLPAEDLARLLEVLREYLPLAADCEITLEARVVGLNEEKVRAAFAGGVNRVSVGVQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  R  GR   A E    +  L+      +  DL++ LP Q M  W  +L      
Sbjct: 179 SFDTEVRRRQGRIATAQEVAERLALLSSEEQGAVITDLMFGLPGQDMDSWHRDLDSCQEL 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            +D L  Y L +  GT   K  + G +  P+
Sbjct: 239 GLDGLDTYALKLIPGTPLQKQVERGSIEQPA 269


>gi|312130052|ref|YP_003997392.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella
           byssophila DSM 17132]
 gi|311906598|gb|ADQ17039.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella
           byssophila DSM 17132]
          Length = 442

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 153/338 (45%), Gaps = 30/338 (8%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           +E N+       L +Y+H P+C   C +C  +  + +    +  +I++ L E +   +  
Sbjct: 32  WETNVKNAPQKRLSLYIHLPYCESLCTFCACHKRITKNHSYEVPYIEAVLKEWKMYVEWM 91

Query: 67  GPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           G R  I  I  GGGTP+   P+N+AL++ GI +  ++  + E + E +P++    + +  
Sbjct: 92  GERPLIEEIHLGGGTPTFFSPENLALLIKGILEWASLPDSYEFSFEGHPNNTTYEHLKVL 151

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNI-FPRMSFDLIYALPKQT 183
              G  R+S GVQ  + Q  + + R     EA+  + L AR + +  +S DL++ LP Q 
Sbjct: 152 YDLGFRRVSFGVQDYDPQVQKAIHRIQ-PFEAVEKVTLAARELGYTSISHDLVFGLPFQN 210

Query: 184 MTQWEMELQRALSYAVDHLSLY---QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +  +   +++ LS   D LSLY    +   KG +  + + + D  LP+      LY + +
Sbjct: 211 LEGFTETVKKTLSLNPDRLSLYSYAHVPWIKG-IGQRGYSEED--LPAGEQKRTLYEMAR 267

Query: 241 SITSAHGLHAYEISNHSFLGA---------ESLHNLNYWRYGD-----YIGIGPGAHSRV 286
            +  A+G   YE+    F  A         E   N N+  Y        IG+G  A S V
Sbjct: 268 ELYEANGY--YEVGMDHFAKANDKMFQAYQEGTLNRNFMGYTTTNSPLLIGLGASAISDV 325

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
                      EK+ E +L+MV +    VV+    S E
Sbjct: 326 ----WSAMAQNEKNVEEYLRMVNEGKIPVVKGHLQSEE 359


>gi|325205453|gb|ADZ00906.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M04-240196]
          Length = 473

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|269119215|ref|YP_003307392.1| coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
 gi|268613093|gb|ACZ07461.1| Coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
          Length = 415

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 25/236 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ------WMRQLTGPRSISSI 74
           +Y+H PFC K C +C+ N   ++     E +    ++E +      +MR     + +  +
Sbjct: 47  LYIHTPFCDKICSFCNLNR--KQLDNDLEEYTDFLISEFEKYGATNYMRH----KRLEVV 100

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP++ +   +  IL+ I KN+ +  N E T E    ++     +   + GVNR+S
Sbjct: 101 YFGGGTPTIFKAGQLERILESINKNFILKDNCEFTFETTLHNLTDEKLEVMERLGVNRLS 160

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQR 193
           +G+Q+  ++  + L R ++   A+  +   +  F  +   D+IY  P QT  + + + + 
Sbjct: 161 IGIQTFSDRGRKILNRTYDKETAVKRLGEIKAKFKGLVCVDIIYNYPDQTPEEVKEDAEI 220

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             S  +D  S Y L I +G+   KM KD         +  D+++L   + +   LH
Sbjct: 221 VHSLNIDSSSFYSLMIHEGS---KMSKD---------IKDDVFHLDYKLETDKELH 264


>gi|121635483|ref|YP_975728.1| coproporphyrinogen III oxidase [Neisseria meningitidis FAM18]
 gi|120867189|emb|CAM10957.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis FAM18]
 gi|254670359|emb|CBA05814.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha153]
 gi|254671795|emb|CBA03870.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha275]
 gi|319411083|emb|CBY91486.1| oxygen-independent coproporphyrinogen III oxidase
           (coproporphyrinogenase; coprogen oxidase) [Neisseria
           meningitidis WUE 2594]
 gi|325132929|gb|EGC55606.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M6190]
 gi|325138916|gb|EGC61466.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis ES14902]
 gi|325198935|gb|ADY94391.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis G2136]
          Length = 473

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|332663092|ref|YP_004445880.1| Radical SAM domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332331906|gb|AEE49007.1| Radical SAM domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 440

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 14/280 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           + + +L +YVH PFC  +C +C+  +        +E +I +  T+   +++  GP   + 
Sbjct: 41  EPTENLFLYVHVPFCEMRCGFCNLFTVANPKGNVEEQYIHALKTQATIVKEEIGPSQFAR 100

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +  GGGTP+ +E   +  +   I  N  T + +V  + E +P ++         + GV+R
Sbjct: 101 LAVGGGTPTFLELPLLEQLFSIIQHNMETNTRDVPFSFEMSPKTITPEKLNFLYQNGVDR 160

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS  E   + LGR     E   A+ + R + F  ++ DLIY    Q    W   L
Sbjct: 161 VSIGIQSFVENEQKTLGRPQKNKEVFDALAMIRAVDFKTLNLDLIYGAYGQNADSWLFSL 220

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q A++Y  + + +Y L     T   KM K+        +    LY L +   ++ G    
Sbjct: 221 QSAMAYKPEEIFIYPLYTRPLTGIEKMAKN------EIDNRFHLYLLAKEYLTSQGYE-- 272

Query: 252 EISNHSFLGA---ESLHNLNYWRYGD-YIGIGPGAHSRVK 287
           +IS   F      ++  NL Y    D  +G+G GA S  K
Sbjct: 273 QISMRMFRLKSIDKTADNLQYCCQEDGMLGLGAGARSYTK 312


>gi|325130905|gb|EGC53635.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis OX99.30304]
 gi|325136951|gb|EGC59548.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M0579]
          Length = 473

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|239624475|ref|ZP_04667506.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520861|gb|EEQ60727.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 505

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 4/219 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F S+      G+   ++++   E+++       R + +I+FGGG
Sbjct: 190 LYVGIPFCPTTCLYCSFTSYPISKWTGRTGLYLEALFKELEYTAGKMKGRPLDTIYFGGG 249

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  ++I  IL  +   +     +E T+EA  P S+     +  R  G+ RIS+  Q
Sbjct: 250 TPTSLPAEDIHAILCKLEDLFDTGHALEFTVEAGRPDSITEEKLKVLRNHGITRISINPQ 309

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR H+         +AR + F  ++ DLI  LP++ M      L      
Sbjct: 310 TMNQKTLDLIGRRHSVEMVKERFWMARELGFDNINMDLIMGLPEEDMDDVRHTLHEVKEL 369

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKD-GDLVLPSENVAVDL 235
           A D L+++ L I++        +  GDL + +    +DL
Sbjct: 370 APDSLTVHSLAIKRAARLNMFREQYGDLKISNTPEMIDL 408


>gi|15676293|ref|NP_273428.1| coproporphyrinogen III oxidase [Neisseria meningitidis MC58]
 gi|161870690|ref|YP_001599863.1| coproporphyrinogen III oxidase [Neisseria meningitidis 053442]
 gi|254805586|ref|YP_003083807.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha14]
 gi|7225600|gb|AAF40819.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis MC58]
 gi|161596243|gb|ABX73903.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis 053442]
 gi|254669128|emb|CBA07761.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha14]
 gi|316984882|gb|EFV63838.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis H44/76]
 gi|325128872|gb|EGC51728.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis N1568]
 gi|325134961|gb|EGC57593.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M13399]
 gi|325145173|gb|EGC67455.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M01-240013]
 gi|325199572|gb|ADY95027.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis H44/76]
 gi|325202804|gb|ADY98258.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M01-240149]
 gi|325203487|gb|ADY98940.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M01-240355]
 gi|325208797|gb|ADZ04249.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis NZ-05/33]
          Length = 473

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|21673211|ref|NP_661276.1| coproporphyrinogen III oxidase [Chlorobium tepidum TLS]
 gi|21646293|gb|AAM71618.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           tepidum TLS]
          Length = 476

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 11/240 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           +  + +Y+H PFC   C +C  N+H       ++ +I + + E Q ++    G  ++  +
Sbjct: 53  TTGISMYIHIPFCENYCYFCGCNAHRTTDHSLEKPYIDALIKEWQMYLDVFPGKLNVKEL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ + P+N+  ++D + ++     +   + E NP S    + +     G  R+S
Sbjct: 113 HIGGGTPTFLSPENLIRLVDTLFRDVNKMDDYMFSFETNPRSTTKEHLEALYSVGFRRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       I +AR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 173 FGIQDFDPVVQAEINRPQSFELVKEKIDMAREIGFNSVNFDLVYGLPKQTLATVTDTIQK 232

Query: 194 ALSYAVDHLSLY----QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +    D L+ Y       + +G   +K+       LP  +V  +LY+  +++  + G H
Sbjct: 233 VMELRPDRLAFYGYGHNPHLYEGQRRFKLED-----LPVGDVKQELYDQGRAMLESIGYH 287


>gi|260173781|ref|ZP_05760193.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
 gi|315922045|ref|ZP_07918285.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695920|gb|EFS32755.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 425

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 169/407 (41%), Gaps = 50/407 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LVPYLKQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 64  QLTGPRSISSIF----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q   P +I   F     GGGTP L+    +  +LD  A      S+   ++E +P   + 
Sbjct: 83  QQLSPLTIGLTFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLI 176
                 ++AGV R+S+GVQS  ++ L  L R       ++A+ AI   +  FP  + DLI
Sbjct: 143 ARLDLLKQAGVARVSIGVQSFLDEELTALKRRPRQDMINQALEAIR--KRQFPFFNIDLI 200

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y +  QT+  +   L++AL +  + L +Y L +  GT   +   D D+       A DL 
Sbjct: 201 YGIKGQTVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERESD-DVCFQMYCAACDLL 259

Query: 237 NLTQSITSA------HGLHAYEISNHSFL-------GAESLHNLNYWRYGDYIGIGPGAH 283
                + ++      H     EIS    +       G   L NL+Y              
Sbjct: 260 KDRGFLQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYA------------- 306

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +R  V    +A  I+ +  +    V +NG        LS E+Q   F++  L    G+  
Sbjct: 307 TRYTVCQRCIAGEIDDYMGTTDFTVARNGF------ILSQEEQRQRFIIKNLMYYMGLDK 360

Query: 344 KDWEMLAGRNLD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +++   G + D +   R L  + +IE     R+  T  GM   D +
Sbjct: 361 AEYKRRFGESPDNVPLFRQLAERQWIEDTDNGRVCLTSEGMAYSDYI 407


>gi|237741345|ref|ZP_04571826.1| coproporphyrinogen oxidase [Fusobacterium sp. 4_1_13]
 gi|229430877|gb|EEO41089.1| coproporphyrinogen oxidase [Fusobacterium sp. 4_1_13]
          Length = 469

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 148/322 (45%), Gaps = 28/322 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +   +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMADVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+     ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKSGFIINMDLIIGLPEETTEEILDTLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
              Y VD+L+++ L  ++ +  +K  ++ +++   +   ++ Y   Q I     +  Y  
Sbjct: 326 LKDYDVDNLTIHCLAFKRASKLFKESQERNII---DRALIEKY--IQKIVEEKAMKPYYM 380

Query: 252 ----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIE-- 298
                     E   +S  G ES+ N+       + + +G G  S++ +        IE  
Sbjct: 381 YRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIEERNGIDYIERY 440

Query: 299 ---KHPESWLKMVRKNGHAVVE 317
              K P  +++ + K     +E
Sbjct: 441 VNPKDPALYIRELDKRCKEKIE 462


>gi|261391896|emb|CAX49356.1| oxygen-independent coproporphyrinogen III oxidase
           (coproporphyrinogenase; coprogen oxidase) [Neisseria
           meningitidis 8013]
          Length = 473

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|13475345|ref|NP_106909.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14026097|dbj|BAB52695.1| coproporphyrinogen III dehydrogenase [Mesorhizobium loti
           MAFF303099]
 gi|20803862|emb|CAD31440.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE PROTEIN
           [Mesorhizobium loti R7A]
          Length = 441

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 9/206 (4%)

Query: 6   AYEN---NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           AYE    N+      SL  Y+H PFC  KC YC F + + R+     N++ +   E++ +
Sbjct: 31  AYEEWLRNLPANDPASL--YLHVPFCRSKCWYCGFPTTITRHDAPIVNYLAALRDEIRLV 88

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +   P++  +S + FGGGTP+L+ P     + + + +++ ++    I +E +P +   +
Sbjct: 89  SE-HAPQALPVSDVHFGGGTPTLMGPVEFLALTEFLRRHFALAETATIAVEIDPRTFTAD 147

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
             +  + AGVNR SLGVQS +    + + R  + ++  AA+  L R+    ++FDLI+ L
Sbjct: 148 MAEALQAAGVNRASLGVQSFDPIVQKAINRVQSEAQTAAAVEMLRRHGVTSINFDLIFGL 207

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT+       + A++   + L+++
Sbjct: 208 PHQTVQSCVETTRAAVAMRPNRLAVF 233


>gi|71278542|ref|YP_271462.1| coproporphyrinogen III oxidase [Colwellia psychrerythraea 34H]
 gi|71144282|gb|AAZ24755.1| oxygen-independent coproporphyrinogen III oxidase [Colwellia
           psychrerythraea 34H]
          Length = 456

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 5/204 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           ++ A EN+     +  L +YVH PFC   C YC  N  + R++   + +++    E+   
Sbjct: 40  FIKAIENSQ----NRELSLYVHIPFCHTLCYYCGCNKVITRHRGKADTYLEYLAQEIALQ 95

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L    ++  + +GGGTPS +    I  ++  + + +  S  +E++IE +P  +E++  
Sbjct: 96  APLFEEYTVKQLHWGGGTPSFLTHPQITQLVSLLKEKFNFSDELEMSIEIDPREIEMDLA 155

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +     G NR+SLGVQ L+ +  + + R  +       I  A+ + F  ++ DLIY LP 
Sbjct: 156 EHLYSLGFNRLSLGVQDLDLKVQQAINRVQSTEFIGDFIQHAKEVGFKSINIDLIYGLPH 215

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT+  +   L +A  + VD +SL+
Sbjct: 216 QTLENFTKTLVKAHEWDVDRISLF 239


>gi|304386631|ref|ZP_07368915.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis ATCC 13091]
 gi|304339281|gb|EFM05357.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis ATCC 13091]
 gi|325141025|gb|EGC63531.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis CU385]
          Length = 493

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 71  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 130

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 131 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 190

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 191 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 250

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 251 PHQTSESIKTTIDTVLSLDPDRLALYH 277


>gi|240850036|ref|YP_002971429.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
 gi|240267159|gb|ACS50747.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
          Length = 478

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 20/295 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSI 71
           + ++ +Y+H PFC   C +C F     ++    E+++ +  TE++    ++R L GP  I
Sbjct: 50  ARTISLYLHIPFCETICSFCPFQKGAYKHVKQIESYMSALTTEIRTKGNFIRSLRGP--I 107

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SI+ GGGTPSL+   NI  I   +   + +SS  E T+E+ P S   +     R+ GVN
Sbjct: 108 RSIYIGGGTPSLLSADNIRHIGKVLHAEFELSSLTEFTLESEPKSTTRDKLYAAREIGVN 167

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS G+QS  E+            +    +  ++ I   + FDL+Y +  Q   +   +L
Sbjct: 168 RISFGIQSFIERFRSLFNLTSTREQINNTVAWSQEIIGHVGFDLLYGMHNQQAEELLYDL 227

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSE-------NVAVDLYNLTQSI 242
           ++A     + ++LY   I    +  ++HK      + PS         +  D+   +   
Sbjct: 228 KQASELHPETINLY--AINNLAITSQLHKSYAQKGLKPSSLQHRQMLRLFSDIVMRSCGY 285

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
              +G    +I+N++ L      + NY+RY  Y+    G H    VG    A+SI
Sbjct: 286 APCNGHSYIKIANNTPLTLAKTSSANYFRYHKYLH---GYHDDYVVGFGASAMSI 337


>gi|171912967|ref|ZP_02928437.1| coproporphyrinogen III oxidase [Verrucomicrobium spinosum DSM 4136]
          Length = 447

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 4/213 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFF 76
           LGVY H PFC K+C +C F  +  +       +I + + E      R     R    ++F
Sbjct: 57  LGVYFHIPFCRKRCHFCYFRVYTDKNAAEIRKYIHAGMEEFARYAARPYLQGRKPHFVYF 116

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +    +  + + +          E+  EA P ++     +  R+ GV R+SLG
Sbjct: 117 GGGTPSYLSVPQLQELTNRMKDLMPWDQAEEVAFEAEPGTLNEKKLEAIREIGVTRLSLG 176

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           V+  ++  L   GR H + E   A   AR++ F  ++ DLI  +   T   W   + +A+
Sbjct: 177 VEHFDDHILESNGRAHRSGEIERAYRFARSLGFEHINIDLIAGMMNDTEELWRAAVAKAV 236

Query: 196 SYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLP 227
               D +++YQ+ +   T  YK M  DG +  P
Sbjct: 237 EMQPDCVTIYQMEVPYNTGIYKQMQTDGKVTAP 269


>gi|225548082|ref|ZP_03769367.1| hypothetical protein RUMHYD_00061 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040758|gb|EEG51004.1| hypothetical protein RUMHYD_00061 [Blautia hydrogenotrophica DSM
           10507]
          Length = 494

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F+S+  ++++     ++Q+   E+  +  +   R + +++
Sbjct: 172 NGYSLYIGIPFCPSICLYCSFSSYPYKQWEKRAGEYVQALKREIWAVAGMMKNRKLDTVY 231

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ + P+ +  +L  I + +   S  E T+EA  P S+     +  R+  V+RIS
Sbjct: 232 MGGGTPTTLPPEYLDEVLTCIEEAFPCESLHEYTVEAGRPDSLTREKLEAVRRHPVSRIS 291

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ +++L  +GR H   E I A  LAR+  F  ++ DLI  LP +   +    L+ 
Sbjct: 292 VNPQTMNDKTLEVIGRRHTVRETIDAFKLARDCGFDNINMDLIVGLPGEGKEEVAHTLEE 351

Query: 194 ALSYAVDHLSLYQLTIEKG 212
               + D L+++ L +++ 
Sbjct: 352 IQKLSPDSLTVHSLAVKRA 370


>gi|19704933|ref|NP_602428.1| coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19712832|gb|AAL93727.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 469

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 106/204 (51%), Gaps = 5/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  +S   E T EA    S+     +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNAKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLNFIINMDLIIGLPEETTEEILDTLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
              Y +D+L+++ L  ++ +  +K
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFK 349


>gi|293412933|ref|ZP_06655601.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468580|gb|EFF11073.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 445

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I++ + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIINTLREKLPLTPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|154245691|ref|YP_001416649.1| oxygen-independent coproporphyrinogen III oxidase [Xanthobacter
           autotrophicus Py2]
 gi|154159776|gb|ABS66992.1| oxygen-independent coproporphyrinogen III oxidase [Xanthobacter
           autotrophicus Py2]
          Length = 467

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
           G   +  YVH PFC + C YC   + V R +   + + +  + E+  + R L G   +S 
Sbjct: 55  GDARVSAYVHVPFCAELCLYCGCQTAVARSRAPVKAYAERLVEEIGLVARHLPGRLKLSH 114

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP+++  ++ A IL  + + +  + + EI IE +P  ++ +      + G NR 
Sbjct: 115 LHFGGGTPTMLADEDFAAILGALRETFDFAPDAEIAIEIDPRVMDADKVATLAREGFNRA 174

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ  +    + +GR+ +  E  A     R      ++ DL+Y LP Q        ++
Sbjct: 175 SLGVQDFDPAVQQAIGRHQSCEETQAVADALRAAGIAALNLDLMYGLPHQDEASVRRTVE 234

Query: 193 RALSYAVDHLSLY 205
            AL    D ++++
Sbjct: 235 AALGLDPDRIAVF 247


>gi|325579301|ref|ZP_08149257.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159536|gb|EGC71670.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 455

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 1/188 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   + ++     E++   +L   R  + + +GG
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDYLEKEIKARSELFKNRVATQVHWGG 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  +    ++  +  ++T++++ E++IE +P  +E++     R  G NRIS+GVQ
Sbjct: 111 GTPTYLTEEQSDRLMKMLKDHFTIAADAEVSIEMDPREIELDMLDHLRNIGFNRISMGVQ 170

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +   + + R  +     A +  AR + F   + DLIY LP Q +  +   L + +  
Sbjct: 171 DFNKAVQKAVNREQDEEFVNALLVRARELGFQSTNLDLIYGLPLQNVESFMFTLHKVIEL 230

Query: 198 AVDHLSLY 205
             D LS++
Sbjct: 231 NPDRLSIF 238


>gi|261380047|ref|ZP_05984620.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           subflava NJ9703]
 gi|284797256|gb|EFC52603.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           subflava NJ9703]
          Length = 473

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALNLRNMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + + I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFEMIRKYFQLIPNGEYSIEIDPRKVSRK 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P Q     +  +   LS   D L+LY
Sbjct: 231 PHQNTESIKTTIDTVLSLDPDRLALY 256


>gi|170766823|ref|ZP_02901276.1| putative coproporphyrinogen III oxidase [Escherichia albertii
           TW07627]
 gi|170124261|gb|EDS93192.1| putative coproporphyrinogen III oxidase [Escherichia albertii
           TW07627]
          Length = 419

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSARDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G  ++PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTIVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGA 298


>gi|291286743|ref|YP_003503559.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883903|gb|ADD67603.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 464

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 5/213 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFG 77
            VY++ PFC  +C YC F  ++ +  +  E+F ++ + E++   +L   G  ++++++ G
Sbjct: 67  AVYINIPFCQTRCAYCGFFKNLAKDDM-MESFTETLVKELKLSAELPLFGKGNVNAVYIG 125

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP  +    I  ILD I +   ++++ E T E        +  +    AGVNR SLGV
Sbjct: 126 GGTPGALHNSQIERILDAINQYIPIANDCEFTFETRTFEFTKDKIETCLNAGVNRFSLGV 185

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS    + + +GR  +       I  + +     +S DL+Y LP Q+   +  ++  A  
Sbjct: 186 QSFNSAARKVIGRVDDGDVVARKIEEMKKYNHAAVSIDLMYGLPYQSEKDFMEDILIADE 245

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPS 228
             VD ++LYQL +   +   K  K G L  +PS
Sbjct: 246 LGVDGMALYQLNVFDDSRLDKKVKSGSLPTVPS 278


>gi|330909553|gb|EGH38067.1| radical SAM family protein HutW [Escherichia coli AA86]
          Length = 419

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 10/279 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQL 65
           N T    N L VY+H PFC   C +C F  + R  +    ++  + + E++     +   
Sbjct: 24  NQTVSPRNRL-VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQ 81

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +GP  I +++FGGGTPS +   ++A I+  + +   ++ + EITIE    + +       
Sbjct: 82  SGP--IHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDAC 139

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTM 184
             AG NR S+G+QS   +  + + R  +   AIA +  L +     +  DL++ LP Q  
Sbjct: 140 LDAGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDA 199

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W  +L  A    +D + LY L +   T   K  ++G   +PS     DLY        
Sbjct: 200 QTWGEDLAIARDIGLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMD 259

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
             G      S+      E +L+NL   +  D +  G GA
Sbjct: 260 DAGWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGA 298


>gi|311746224|ref|ZP_07720009.1| oxygen-independent coproporphyrinogen III oxidase [Algoriphagus sp.
           PR1]
 gi|126576454|gb|EAZ80732.1| oxygen-independent coproporphyrinogen III oxidase [Algoriphagus sp.
           PR1]
          Length = 452

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 33/391 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL---TGPRSIS 72
           S  + +Y+H PFC   C YC  N  + +    +  ++ S L  ++W R L   +    ++
Sbjct: 50  SKGITLYIHLPFCESLCTYCGCNKRITKNHEVEIPYLNSIL--LEWKRYLELFSEKPKLA 107

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I  GGGTP+  +P +++  L  I  +  V  + E + E +P++  + + +   K G +R
Sbjct: 108 GIHLGGGTPTFFKPSSLSFFLQEILNSSEVMDDAEFSFEGHPNNTTLEHLEELHKLGFDR 167

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S G+Q  + +  + + R     +   A  +AR   +  ++FDLIY LP QT+       
Sbjct: 168 VSYGIQDFDMKVQQAIHRIQPFEKVQEATTIARQTGYQSVNFDLIYGLPHQTLDTLYTTF 227

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-----NLTQSITSAH 246
           ++      D ++ Y          +   K  +  LP++N   +LY     NL +      
Sbjct: 228 EKVKMLRPDRIAFYSYAHLPSV--FPAQKSYESYLPNDNQKRELYEFGKANLIKIGYREI 285

Query: 247 GLHAYEISNHSFLGA---ESLHN--LNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           G+  + + N     A   ++LH   + Y      I IG GA S   +  H      EK+ 
Sbjct: 286 GMDHFALPNDPLYTAKTNDTLHRNFMGYTTSPSKILIGLGASSISDI--HLAYAQNEKNI 343

Query: 302 ESWLKMVRKN------GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           E++  M+  +      GH + EK+ +  E   D    +  + +  I +  WE L  +   
Sbjct: 344 EAYQGMINNDSWAFQKGHLLSEKDIIVREIILD----IICQHQAEIPLDIWESLNEKQ-- 397

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           I   + +Q +G +  +  S+L+   +G+ ++
Sbjct: 398 IFNLKEMQWEGLLS-IDKSKLKVNSQGIAVI 427


>gi|85710894|ref|ZP_01041955.1| coproporphyrinogen III oxidase [Idiomarina baltica OS145]
 gi|85695298|gb|EAQ33235.1| coproporphyrinogen III oxidase [Idiomarina baltica OS145]
          Length = 451

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 9/206 (4%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A   N+  +    + +Y+H PFC   C YC  N  + R++   + ++ +  TE++  R 
Sbjct: 34  TATCQNVVAKYQKPISLYIHLPFCASLCYYCGCNKVITRHQYKADEYLDALGTELELYRS 93

Query: 65  LTGPRSISSIFFGGGTPSLIE-PQ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   + I+S+  GGGTP+ +  PQ    +ALI D ++ N  +    E++IE +P   + +
Sbjct: 94  VLAKKDIASVHLGGGTPTFLNTPQLRRLMALIKD-VSSNQAID---ELSIEVDPRQCDND 149

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R  G NR+S G+Q  +      + R  +       ++ AR++ F  +SFDLIY L
Sbjct: 150 KLSVLRALGFNRLSFGIQDFDNDVQVAIHRTQSYELVADQVNHARSLGFESISFDLIYGL 209

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT  ++   L      + D +SL+
Sbjct: 210 PLQTEARFAHTLALVERLSPDRISLF 235


>gi|323188903|gb|EFZ74187.1| radical SAM superfamily protein [Escherichia coli RN587/1]
          Length = 419

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I++ + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIINTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGA 298


>gi|296313328|ref|ZP_06863269.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           polysaccharea ATCC 43768]
 gi|296840141|gb|EFH24079.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           polysaccharea ATCC 43768]
          Length = 473

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGKHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|331649321|ref|ZP_08350407.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
 gi|331041819|gb|EGI13963.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
          Length = 445

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 10/279 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQL 65
           N T    N L VY+H PFC   C +C F  + R  +    ++  + + E++     +   
Sbjct: 50  NQTVSPRNRL-VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQ 107

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +GP  I +++FGGGTPS +   ++A I+  + +   ++ + EITIE    + +       
Sbjct: 108 SGP--IHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDAC 165

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTM 184
             AG NR S+G+QS   +  + + R  +   AIA +  L +     +  DL++ LP Q  
Sbjct: 166 LDAGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDA 225

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W  +L  A    +D + LY L +   T   K  ++G   +PS     DLY        
Sbjct: 226 QTWGEDLAIARDIGLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMD 285

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
             G      S+      E +L+NL   +  D +  G GA
Sbjct: 286 DAGWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|281180540|dbj|BAI56870.1| putative coproporphyrinogen oxidase [Escherichia coli SE15]
          Length = 445

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 9/268 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSIFF 76
           VY+H PFC   C +C F  + R  +    ++  + + E++     +   +GP  I +++F
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSGP--IHAVYF 116

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIG 176

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A 
Sbjct: 177 IQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIAR 236

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +D + LY L +   T   K  ++G   +PS     DLY          G      S+
Sbjct: 237 DIGLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSH 296

Query: 256 HSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
                 E +L+NL   +  D +  G GA
Sbjct: 297 WGRTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|90569657|gb|ABD94727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas aeruginosa]
          Length = 474

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 5/199 (2%)

Query: 12  TGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPR 69
           + QG +  L VY+H PFC   C YC  N  + +       ++     E+     L  G R
Sbjct: 60  SDQGPAKPLSVYIHIPFCKSLCYYCACNKIITQKTHRAVEYLDYLKREIAMQAALFDGSR 119

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRK 127
            ++ +  GGGTP+ +  Q +  ++D + +++ +  S N E +IE +P ++        R 
Sbjct: 120 KLTQLHLGGGTPTYLTSQQLGEVMDSLRQHFNLDESDNHEFSIEVDPRTISAERIAELRA 179

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G NR+S GVQ  +EQ  + + R  +  +    +  AR   F  +S DLIY LP QT+  
Sbjct: 180 QGFNRLSFGVQDFDEQVQQSVNRVQSEQQVFELVAAARQAKFKSVSVDLIYGLPLQTVAS 239

Query: 187 WEMELQRALSYAVDHLSLY 205
           ++  L + ++   D ++ Y
Sbjct: 240 FDTTLSKIIALRPDRIAAY 258


>gi|260495017|ref|ZP_05815146.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260197460|gb|EEW94978.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 469

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 5/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F++  L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEVLLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  +S   E T EA    S+ +   +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS    +L+ + R  N          A+ +   ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLDTLKRVNRRFNREHFDLIFKEAKKLEFIINMDLIIGLPEETTEEILDTLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
              Y +D+L+++ L  ++ +  +K
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFK 349


>gi|301335324|ref|ZP_07223568.1| coproporphyrinogen III oxidase [Chlamydia trachomatis L2tet1]
 gi|301336310|ref|ZP_07224512.1| coproporphyrinogen III oxidase [Chlamydia muridarum MopnTet14]
          Length = 457

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 171/390 (43%), Gaps = 24/390 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSI 71
            + S+ L +Y H PFC   C YC     + R +   +++I++ + EM+ +  L G  + +
Sbjct: 43  AKESSPLSLYFHIPFCQSMCLYCGCTVVLNRKEEVVDHYIETLIQEMRLVFSLLGEKKKV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I   + +S+  E+ IE +P S+  + N  +   + G
Sbjct: 103 SRIHFGGGTPSRLSRAQFEHLFTHIQLFFDLSNIEELAIEFDPRSLRPDPNKPKFLHQLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A +L R + F  ++ DLIY LPKQT   ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYNLFRELNFTGINIDLIYGLPKQTQASFK 222

Query: 189 MELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITS 244
             +Q  L    D L+L+    +       K  +  DL    E  A+     + L Q    
Sbjct: 223 QTIQHILEMRPDRLALFSFAHVPWAKPHQKALRAKDLPSMEEKFAIYSQSRHTLIQEGYH 282

Query: 245 AHGLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
           A GL  + + N     A     L  N+  Y      D +G G  A S ++    + A  I
Sbjct: 283 AIGLDHFSLPNDPLTLALKNKTLIRNFQGYSLPPEEDLLGFGLSATSFIRGIYLQNAKDI 342

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            ++  + L        A V+ + LS + +  ++++  L     +S  ++E L     D+ 
Sbjct: 343 REYSTTIL----SGKLATVKGKILSQDDKIRKWVIHTLMCSFSLSKLEFEQLFHERFDLY 398

Query: 358 CERNLQRQGFIE-----RVQFSRLRCTQRG 382
              +  R   +E     R   S LR T  G
Sbjct: 399 FADSYDRLCGMESAGLIRQDSSSLRVTPLG 428


>gi|56478365|ref|YP_159954.1| coproporphyrinogen III oxidase [Aromatoleum aromaticum EbN1]
 gi|56314408|emb|CAI09053.1| Oxygen-independent coproporphyrinogen III oxidase [Aromatoleum
           aromaticum EbN1]
          Length = 475

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 3/229 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
            G  S  L +Y H PFC   C YC  N  + +       +++    E+    + L G   
Sbjct: 63  VGGVSKPLSLYFHIPFCNTICYYCACNKIITKDHARSAKYLKYLDKEIGMQAEALGGSHQ 122

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ +  GGGTP+ +    +  ++D +   +T+  N E +IE +P  V+    +     G 
Sbjct: 123 VTQLHLGGGTPTFLSHDELRQLMDSVRSRFTLVPNGEYSIEVDPRKVDFETVKLLADLGF 182

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ   E     + R  +  E    I  AR   F  +S DLIY LPKQ +  +  
Sbjct: 183 NRMSVGVQDFNEDVQVAVNRVQSFDETKLVIDSARATGFKSISLDLIYGLPKQNIISFNR 242

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            L++ L+ + D +SLY      G LF    +   + +P+ +  + +  L
Sbjct: 243 TLEQVLALSPDRVSLYSYAHLPG-LFKPQRRITVVDMPTSDTKLQILQL 290


>gi|209695230|ref|YP_002263159.1| coproporphyrinogen III oxidase [Aliivibrio salmonicida LFI1238]
 gi|208009182|emb|CAQ79435.1| putative coproporphyrinogen oxidase PhuW [Aliivibrio salmonicida
           LFI1238]
          Length = 440

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 4/211 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           +Y+H PFC  +C YC+F  H    K   E++  + + E++W  Q   T      +++ GG
Sbjct: 53  LYIHIPFCRVRCTYCNFFQHASS-KSLVESYFDALMIEIKWKAQQAWTQAAPFHAVYVGG 111

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q I L+   +   + ++++ EIT+E   +  +   F+   + G NR S GVQ
Sbjct: 112 GTPTDLSAQQIELLGKAVRTYFPLTTDCEITLEGRINRFDEEMFERSLEGGFNRFSFGVQ 171

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  L+ +    +  DL+Y LP QT   W+ +L   L  
Sbjct: 172 SFNTQVRRSAKRLDDKEYVLRRIQELSNSNQAPIVLDLLYGLPFQTSDIWQQDLNDFLET 231

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
               + LYQL    GT    M + G L  P+
Sbjct: 232 GAHGVDLYQLIEMGGTPMKGMIEQGKLPQPA 262


>gi|262273187|ref|ZP_06051003.1| coproporphyrinogen III oxidase oxygen-independent [Grimontia
           hollisae CIP 101886]
 gi|262222765|gb|EEY74074.1| coproporphyrinogen III oxidase oxygen-independent [Grimontia
           hollisae CIP 101886]
          Length = 457

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 116/230 (50%), Gaps = 8/230 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +YVH PFC   C YC  N  + R+    + ++ +   E++    L   R+++ + +G
Sbjct: 52  NLSLYVHIPFCHTLCYYCGCNKVITRHAHKADQYLDALELEIRQRAYLLRDRNVTQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I+ ++  + + + ++++ EI+IE +P  +E++     R  G NR+S+GV
Sbjct: 112 GGTPTFLSKAQISRLMSLLREEFRLNADAEISIEVDPREMELDMLDHLRSEGFNRLSIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  ++   + + R  + +   A +  A+ + F   + DLIY LP Q    +   L++ L+
Sbjct: 172 QDFDKTVQKAVNREQDEAFIKAMVMRAKALGFRSTNLDLIYGLPHQNSETFAKTLEQVLT 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITS 244
                LS++        LF      K+ +L  P E +A+    L Q+I +
Sbjct: 232 MQPGRLSVFNYA-HLPQLFAAQRKIKEANLPSPQEKLAM----LEQTINT 276


>gi|239933117|ref|ZP_04690070.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
 gi|291441465|ref|ZP_06580855.1| CalE1 [Streptomyces ghanaensis ATCC 14672]
 gi|291344360|gb|EFE71316.1| CalE1 [Streptomyces ghanaensis ATCC 14672]
          Length = 455

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 168/401 (41%), Gaps = 36/401 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISS 73
           ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R+  G   P   ++
Sbjct: 52  DALSLYLHIPFCEIRCGFCNLFTRIGAPDGLTGAYLDALERQATAVREALGEREPVRFAT 111

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVN 131
             FGGGTP+ +    +  + D IA++   +    V +++EA+P++   +  Q   + G  
Sbjct: 112 AAFGGGTPTFLTAAELERLCD-IAEHRAGADLRAVPLSVEASPATATADRLQVLAERGTT 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQS ++   R   R    ++  AA+   R+   P ++ DLIY +  QT   W   
Sbjct: 171 RLSLGVQSFDDTEARAAVRPQRRADVEAALGRVRDARIPVLNIDLIYGIDGQTERTWLRS 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  AL++  + L LY L I   T   +   D D     ++  + LY L +    AHG   
Sbjct: 231 LDAALAWRPEELYLYPLYIRPLTGLGRRAGDPDPAW--DDQRLRLYRLGRDHLLAHGYRQ 288

Query: 251 YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV---------KVGSHRVAISIEKH 300
             +       A      +Y    D  IG+G GA S            VG H +   ++ +
Sbjct: 289 QSMRMFRRADAPPQGADDYACQTDGMIGLGCGARSYTAGLHYSFDYAVGMHEIRGIVDDY 348

Query: 301 PESWLKMVRKNGHAVVEKEF---LSSEQQADEFLMMGLRLREGISVKDWEM-LAGRNLDI 356
                  V +        E+   + +++     L+  L   EG+ V D+     GR    
Sbjct: 349 -------VSRPAADFARAEYGRRIDTDEARRRHLLQSLLQAEGLDVADYRARFGGRTPRE 401

Query: 357 ECERNLQRQGFIERVQFS----RLRCTQRGMTMLDSVIANL 393
           +    L R  F +R   +    RLR T  G+   D+V   L
Sbjct: 402 DFPAELSR--FADRGWLADDGPRLRLTPEGLAHSDAVGPEL 440


>gi|153808208|ref|ZP_01960876.1| hypothetical protein BACCAC_02494 [Bacteroides caccae ATCC 43185]
 gi|149129111|gb|EDM20327.1| hypothetical protein BACCAC_02494 [Bacteroides caccae ATCC 43185]
          Length = 424

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 159/384 (41%), Gaps = 36/384 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISSIFF 76
           +Y H PFC  KC YC+  S     +  +  +I ++L  +    Q +  LT   +  S   
Sbjct: 44  LYFHIPFCSHKCGYCNLFS----LQTNRTEYIATYLDTLHRQAQQLSPLTAGLTFDSFAI 99

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP L+    +  ++   A      S+   ++E +P   +       +KAGV+R+S+G
Sbjct: 100 GGGTPLLLTVPQLEQLMATAALFGVHPSHAFTSVETSPEYADRPRLNVLKKAGVSRVSIG 159

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +++ L+ + R    +    A+   R + FP  + DLIY +  QT+  +   L+ AL
Sbjct: 160 IQSFQDEELKAIKRRPRQNTIYQALDDIRQMDFPYFNIDLIYGIKGQTVESFLYSLEEAL 219

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  + L +Y L + +GT   +   D        +V   +Y     +  A G    + S 
Sbjct: 220 RFQPNELFIYPLYVRQGTGITEREPD--------DVCFRMYRAACKLLQAKGF--LQTSM 269

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS---------RVKVGSHRVAISIEKHPESWLK 306
             F+   S            +  G G  S         R  V    +A  I+++  +   
Sbjct: 270 RRFIHHPSTDAEVSCGDEVMLSCGSGGRSYLGDLHYATRYTVCQQCIAREIDEYMATTDF 329

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQ 365
            V +NG        LS+++Q   F++  L    GI   ++    G  LD     R L  Q
Sbjct: 330 TVARNGF------ILSAKEQQQRFIIKNLMYYMGIDKAEYTRRFGEPLDRTPLFRQLAEQ 383

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
            +IE     R+R T  G+   D +
Sbjct: 384 YWIEETP-ERIRLTPEGLGYSDYI 406


>gi|83815781|ref|YP_445516.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Salinibacter ruber DSM 13855]
 gi|83757175|gb|ABC45288.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Salinibacter ruber DSM 13855]
          Length = 373

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 165/389 (42%), Gaps = 40/389 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PF     PY D  + V                  +    L     I S + GGG
Sbjct: 3   GLYVHVPFRAAPRPYDDAYTVVSPTPDASALAAALAREIDRHANSLLEGVPIRSFYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PSL  P  +  ++  + +    ++  E+T+E +P+          R+ GV R+S+   S
Sbjct: 63  RPSLCRPGALRPLVRALGRVVEPTALDEVTVELHPADASSGYLSHLRRLGVTRLSIEGLS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L  +G  H+A +   +I   R   F + S DL++    Q+   W+  L RA+S  
Sbjct: 123 FVGEDLTAVGAPHSADDLARSIRRVRRAGFRQFSVDLVFGGAGQSRAGWKASLHRAVSLG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HL+L++L              GD    ++ +A  L     +   A G   YE+++ + 
Sbjct: 183 VPHLTLHELDT------------GDAEKRADQLAFAL-----TFLRAKGYVPYELTHFAR 225

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE-----------SWLKM 307
            G  SLH  + + +G  +G+GPGA S         A  +   P            ++++ 
Sbjct: 226 PGHRSLHQEHVYAHGSILGLGPGAES-------FWAPDLPPSPAARRWSNVADLTAYVEG 278

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI---SVKDWEMLAGRNLDIECERNLQR 364
           ++ +   V   E LS+   A E++++ LR + G+   ++ D   L  R+   +  R L+R
Sbjct: 279 LQADAPPVAHDETLSTSALAREYMLLRLRTQAGLDLNALADRYDLRLRDRKADTLRRLRR 338

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +G I      R+  T RG  + D++   L
Sbjct: 339 RGLIHE-DPDRVALTDRGRLLTDAITRRL 366


>gi|218768848|ref|YP_002343360.1| coproporphyrinogen III oxidase [Neisseria meningitidis Z2491]
 gi|121052856|emb|CAM09208.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis Z2491]
          Length = 473

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEFLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT    +  +   LS   D L+LY 
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYH 257


>gi|294783721|ref|ZP_06749045.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480599|gb|EFG28376.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 1_1_41FAA]
          Length = 469

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 5/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYLGIPFCPTKCKYCSFASYEIGGGVGRFYNDFVEALLKEIQIIGNFLKTYNKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +   +  +K  V+RI
Sbjct: 206 YFGGGTPSTLTEIDLERVLKKLLENIDMSDVKEFTFEAGREDSLNIKKLEIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+N+   ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKNLGFIINMDLIMGLPEETTEEILDTLAQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
             +Y +D+L+++ L  ++ +  +K
Sbjct: 326 LNAYDIDNLTIHCLAFKRASKLFK 349


>gi|291561448|emb|CBL40247.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [butyrate-producing bacterium SS3/4]
          Length = 485

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 104/199 (52%), Gaps = 11/199 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +YV  PFC   C YC F S    Y +G        + ++   E+ ++ +    R++ +++
Sbjct: 167 LYVGIPFCPTTCLYCSFTS----YPIGAWERKVHLYHEALFKELDYVAEKMKGRTLDTVY 222

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ ++ + +  +L  I   + +S   E T+EA  P S+  + F+  R   ++RIS
Sbjct: 223 FGGGTPTSLKAEELDALLTKIENTFDLSKVQEFTVEAGRPDSITEDKFKVLRAHNISRIS 282

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++ +L  +GR+H          +AR++ F  ++ DLI  LP++ +      +++
Sbjct: 283 INPQTMKQATLDLIGRHHTVDMVKEKFRMARDLGFDNINMDLIIGLPEEDIDDVRSTMEQ 342

Query: 194 ALSYAVDHLSLYQLTIEKG 212
               A D ++++ L I++ 
Sbjct: 343 VRELAPDSVTVHSLAIKRA 361


>gi|261401166|ref|ZP_05987291.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica ATCC 23970]
 gi|269208838|gb|EEZ75293.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica ATCC 23970]
          Length = 470

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A  +      +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 48  EYLEALHSRGADASNKPLSLYIHIPFCNTICYYCGCNKIITKDKGRADAYIEYLEKEMKL 107

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + + I K + +  + E +IE +P  V   
Sbjct: 108 LAPHLGGRHQLAQLHFGGGTPTFLSDNQLERVFEMIRKYFQLIPDGEYSIEIDPRKVSRE 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 168 TVLKLGKLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT    +  +   LS   D L+LY
Sbjct: 228 PYQTSESIKTTIDTVLSLDPDRLALY 253


>gi|319941404|ref|ZP_08015732.1| oxygen-independent coproporphyrinogen III oxidase [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805024|gb|EFW01854.1| oxygen-independent coproporphyrinogen III oxidase [Sutterella
           wadsworthensis 3_1_45B]
          Length = 467

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 3/207 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A     T +    L +YVH PFC   C YC  N  V R       +I     E   +
Sbjct: 45  YARALAGRGTAKEPAPLSLYVHVPFCNDVCFYCGCNKIVTRDHSRSAAYIDLIGQEADLV 104

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVN 120
           +  LTG + +  + FGGGTP+ +    + L++D + K + ++ +  E +IE +P +   +
Sbjct: 105 KAHLTGSQELEQLHFGGGTPTFLTEDELELMMDTLTKRFPLAKTGGEFSIEVDPRTCGPS 164

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYAL 179
             +  R+ G+NR+SLGVQ       + + R          +  AR   F  ++ DLIY L
Sbjct: 165 KVKKLREIGLNRMSLGVQDFNPDVQKAVNRIQPFEMTKETMDAARAEGFHSINMDLIYGL 224

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           PKQT   +   + + L  + D ++LY 
Sbjct: 225 PKQTRETFAQTIDQVLELSPDRIALYH 251


>gi|319785982|ref|YP_004145457.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464494|gb|ADV26226.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 466

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 5/226 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFF 76
            + +Y+H PFC   C YC  N  + R K     ++     E+  + +L    R +  + F
Sbjct: 56  PISLYLHVPFCTSPCFYCGCNRIITRDKARGAAYLTRLYREIGMVAELFDRDRDVEQVHF 115

Query: 77  GGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ +EP  IA ++D + +  ++   + ++ +IE +P  +          AG NR S
Sbjct: 116 GGGTPNFLEPAQIAEVMDVLRRHFHFAPGARMDCSIELDPRFITPAEVGELAAAGFNRAS 175

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +    + + R     + +  I   R + F  ++ DLIY LPKQT+  +E  L  
Sbjct: 176 LGVQDFDPVVQQAVNRVQGVEQTLGIIEACRTHGFRSVNVDLIYGLPKQTLEGFERTLDT 235

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            L    D L++Y        LF    +     LPS    +DL  L 
Sbjct: 236 TLQVRPDRLAIYGYA-HLPNLFRPQQRIHAEDLPSAEQKLDLLRLA 280


>gi|59801909|ref|YP_208621.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA 1090]
 gi|239999647|ref|ZP_04719571.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|240014821|ref|ZP_04721734.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI18]
 gi|240017270|ref|ZP_04723810.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA6140]
 gi|240081091|ref|ZP_04725634.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|240121343|ref|ZP_04734305.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID24-1]
 gi|240124178|ref|ZP_04737134.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
 gi|240126204|ref|ZP_04739090.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
 gi|254494362|ref|ZP_05107533.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae 1291]
 gi|260439833|ref|ZP_05793649.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|268595458|ref|ZP_06129625.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|268597204|ref|ZP_06131371.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268682802|ref|ZP_06149664.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID332]
 gi|268684787|ref|ZP_06151649.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-92-679]
 gi|291043107|ref|ZP_06568830.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|293398447|ref|ZP_06642625.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
 gi|59718804|gb|AAW90209.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria gonorrhoeae FA 1090]
 gi|226513402|gb|EEH62747.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae 1291]
 gi|268548847|gb|EEZ44265.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|268550992|gb|EEZ46011.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268623086|gb|EEZ55486.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID332]
 gi|268625071|gb|EEZ57471.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-92-679]
 gi|291012713|gb|EFE04696.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|291610918|gb|EFF40015.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
 gi|317164903|gb|ADV08444.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 473

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSI 71
           G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ +   L G   +
Sbjct: 62  GALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIEYLEKEMELLAPHLNGRHQL 121

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +      + G N
Sbjct: 122 AQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRDTVLMLGRLGFN 181

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY LP QT    +  
Sbjct: 182 RMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGLPHQTSESIKTT 241

Query: 191 LQRALSYAVDHLSLYQ 206
           +   LS   D L+LY 
Sbjct: 242 IDTVLSLDPDRLALYH 257


>gi|315651352|ref|ZP_07904378.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
 gi|315486411|gb|EFU76767.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
          Length = 417

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 108/196 (55%), Gaps = 14/196 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           +  G+YVH PFC   C +C +   +   +  +  +I + + E+  + RQ  G R  +S++
Sbjct: 35  SEFGLYVHIPFCKSICNFCPYCKIIYDEETAK-GYIDALIKEIHLVGRQWNGRRRATSLY 93

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+L+  + I  I+  + +++ ++    I IE +P +V V+  +  + AGV++IS+
Sbjct: 94  FGGGTPALLADR-ITDIISALREHFIITDG--IGIELHPDNVNVSVLKTLKSAGVDKISI 150

Query: 136 GVQSLEEQSLRFLGRN----HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           G+QS +++  R L R      + S+A+  +      F  +S D I+ALP QT    + ++
Sbjct: 151 GIQSFQDKYRRVLRRRKFDIKDISKALNEVE-----FETVSMDFIFALPTQTFGDLKNDI 205

Query: 192 QRALSYAVDHLSLYQL 207
             A +   +H+++Y L
Sbjct: 206 DMAFANGANHIAIYPL 221


>gi|90022128|ref|YP_527955.1| coproporphyrinogen III oxidase [Saccharophagus degradans 2-40]
 gi|89951728|gb|ABD81743.1| oxygen-independent coproporphyrinogen III oxidase [Saccharophagus
           degradans 2-40]
          Length = 484

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           +    L +Y H PFC   C YC  N  +   K     ++ + + EM  +  Q+   R + 
Sbjct: 62  KAQKPLSLYFHIPFCDTVCYYCGCNKIITANKAKSTPYLTAIIKEMDLVAAQVDTTRPVQ 121

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +  + +  +++ +   + V+ +   + +IE +P+ V     +  R  G 
Sbjct: 122 QLHFGGGTPTFLSDEQLTTLMNAVKARFNVADSAFRDFSIEVHPAGVTPQRIKHLRTIGF 181

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q       + + R ++  +    +   R N F  +S DLIY LPKQT   +  
Sbjct: 182 NRVSMGIQDFSPDVQKAVNRFNSPQQVGELVTAVRENNFASLSMDLIYGLPKQTAESFAE 241

Query: 190 ELQRALSYAVDHLSLY 205
            LQ+ ++ + D ++L+
Sbjct: 242 TLQKIIALSPDRIALF 257


>gi|195541881|gb|ACF98082.1| putative coproporphyrinogen III oxidase [uncultured bacterium 1042]
          Length = 457

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 23/291 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           + + +YVH P+C + C +C  N+ + R       ++QS L E+  +    G ++ + S+ 
Sbjct: 53  DEVSLYVHVPYCDRLCWFCACNTRITRRYEPVAAYLQSLLAEIATIAGAVGGKAKVRSVH 112

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P++++PQ+I  +   +   +    + E+++E +P+ ++   F      G++R+SL
Sbjct: 113 FGGGSPTMLKPQDIVALDRSMRGAFDYLPDAEVSVEIDPNDMDEARFDALAAIGLSRVSL 172

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +  + + R  +  +  A +   R    R ++ DL+Y LP QT       +++A
Sbjct: 173 GVQDFDPKVQKAINRLQSFEQTRAVVEGTRARGVRSVNLDLLYGLPHQTCESVAATMEQA 232

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHK---------DGDLVLPSENVAVDLYNLTQSITSA 245
           LS   D ++L+         ++K H+         DG   L     A  L         A
Sbjct: 233 LSLQPDRIALFGYA---HVPWFKKHQTMIDEAWLPDGAARLAQSQTAASLVQARG--YQA 287

Query: 246 HGLHAYEISNHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRVKVG 289
            GL  +   + +   A     L  N+  Y D      IG+GP + SR + G
Sbjct: 288 VGLDHFAKPDDTLAVAARNGTLRRNFQGYTDDRCETLIGLGPSSISRFRQG 338


>gi|226944101|ref|YP_002799174.1| coproporphyrinogen III oxidase [Azotobacter vinelandii DJ]
 gi|226719028|gb|ACO78199.1| oxygen-independent coproporphyrinogen III oxidase [Azotobacter
           vinelandii DJ]
          Length = 458

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 2/194 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           Q    L +Y+H PFC   C YC  N  + + +   + +++    E+  + R L+  + + 
Sbjct: 49  QAKRPLSIYIHIPFCAHVCYYCACNKVITKDRGRAQPYLERLEKEIDIVSRHLSPQQQVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +  GGGTP+ +    +  +++ + +++  +  V+ +IE +P   + +     R+ G NR
Sbjct: 109 QLHLGGGTPTFLSHGELQRLMEFLRQHFGFAEKVDCSIEIDPREADWSTMGLLRELGFNR 168

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ L+    R + R  +  E  A I  AR + F  ++ DLIY LPKQT   +   +
Sbjct: 169 ISLGVQDLDPGVQRAVNRLQSLEETSAIIEAARTLEFRSINVDLIYGLPKQTPETFTRTV 228

Query: 192 QRALSYAVDHLSLY 205
           +  ++   D LS++
Sbjct: 229 EEIIALQPDRLSVF 242


>gi|240113301|ref|ZP_04727791.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|240118633|ref|ZP_04732695.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|240128848|ref|ZP_04741509.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268599380|ref|ZP_06133547.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae MS11]
 gi|268604346|ref|ZP_06138513.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID1]
 gi|268687230|ref|ZP_06154092.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268583511|gb|EEZ48187.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae MS11]
 gi|268588477|gb|EEZ53153.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID1]
 gi|268627514|gb|EEZ59914.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 473

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSI 71
           G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ +   L G   +
Sbjct: 62  GALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIEYLEKEMELLAPHLNGRHQL 121

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +      + G N
Sbjct: 122 AQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRDTVLMLGRLGFN 181

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY LP QT    +  
Sbjct: 182 RMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGLPHQTSESIKTT 241

Query: 191 LQRALSYAVDHLSLYQ 206
           +   LS   D L+LY 
Sbjct: 242 IDTVLSLDPDRLALYH 257


>gi|242037141|ref|XP_002465965.1| hypothetical protein SORBIDRAFT_01g049090 [Sorghum bicolor]
 gi|241919819|gb|EER92963.1| hypothetical protein SORBIDRAFT_01g049090 [Sorghum bicolor]
          Length = 429

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 148/349 (42%), Gaps = 63/349 (18%)

Query: 22  YVHWPFCVKKCPYCDF-----NSHVRRYKVGQE--------NFIQSFLTEMQWMRQLTGP 68
           YVH PFC K+C YCDF      S       G E        +++Q  L E+   R ++  
Sbjct: 59  YVHLPFCRKRCHYCDFPIVALGSSSAPSPGGGEAAEDPRIVDYVQLLLREVSATRPVSDD 118

Query: 69  R-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + ++FFGGGTPSL+ P+ +A ILD +   + +S+  E++IE +P + +    +    
Sbjct: 119 GVPLETVFFGGGTPSLVPPRLVATILDALRARFGLSACPEVSIEMDPGTFDAARLRELVG 178

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
            GVNR+SL V  L+   L   G NH    + ++                   P  T    
Sbjct: 179 VGVNRVSL-VCGLKVNLLIQFGPNHVLRVSASS-------------------PPYT---- 214

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                            Y+ T+         +  G   LPS+  + + Y +     S  G
Sbjct: 215 -----------------YKFTV------CAEYSPGVFPLPSDTESANFYKIASKRLSEAG 251

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEIS++   G E  HNL YW+   +   G G+ S +    +      +++ E W++ 
Sbjct: 252 YNHYEISSYCKPGYECKHNLTYWQNRPFYAFGLGSASYINGIRYSRPRRTKEYAE-WVQK 310

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           + ++G    E      +  A + +M+ LR   G+ ++ +    G++L +
Sbjct: 311 L-EDGTWCHESRSSDMKDMALDVVMLSLRTAWGLDLQSFSKSFGKSLAL 358


>gi|331674993|ref|ZP_08375750.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
 gi|331067902|gb|EGI39300.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
          Length = 445

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLTIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|281356027|ref|ZP_06242520.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
 gi|281317396|gb|EFB01417.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
          Length = 433

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 9/243 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC  +C +C F   S     + G    +   L +  W  +L  P  I++++FGG
Sbjct: 43  LYLHIPFCRSRCSFCLFYSGSATDSERAGYVRLLAKELND--WAERLP-PSPINAVYFGG 99

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + PQ + L+L  +   + ++++ EIT+E+  + +           GVNR SLGVQ
Sbjct: 100 GTPSDLAPQEMELLLGILRSRYPLANDCEITLESRLNGLTDRKIDAAIANGVNRFSLGVQ 159

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           + + +  R LGR  +    +  +    ARN    ++ DL+Y LP QT      +L+  L+
Sbjct: 160 TFDTELRRRLGRVSDRETVLDTLGRLTARNQA-SVAVDLLYGLPGQTPELLLADLETLLN 218

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             V  LS Y+L +   +        G +  +P E     LY L +    A G+      +
Sbjct: 219 SGVSGLSFYRLNVRPTSELAGQLAAGTMPPVPPEETIYRLYELAEERLEAAGVKRLSFKH 278

Query: 256 HSF 258
            SF
Sbjct: 279 FSF 281


>gi|154497024|ref|ZP_02035720.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
           29799]
 gi|150273423|gb|EDN00551.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
           29799]
          Length = 493

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 132/266 (49%), Gaps = 18/266 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRS- 70
           + + +YV  PFC  +C YC F S      VG+       ++++   E++    L      
Sbjct: 168 DEISLYVGIPFCPTRCAYCSFVSA----DVGKALKLLPPYLEALFREVEAAGDLLKRLGL 223

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
            + +++ GGGTP+ +  + ++ ++  I  +  +S   E T+EA  P ++        ++ 
Sbjct: 224 YVRTVYIGGGTPTTLSAEQLSALMGHIRTHIDLSRCTEYTVEAGRPDTITAEKLAALKEN 283

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G +R+S+  QS+ ++ LR +GR+H A++ + A  L RN   P ++ DLI  LP+ +   +
Sbjct: 284 GADRVSVNPQSMSDKVLRAMGRSHTAADILRAYELVRNSGIPCVNMDLIAGLPEDSREGF 343

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L + LS    +++++ L ++KG+   ++  +G  +  +E+VA D+ +   +     G
Sbjct: 344 RSTLDQVLSMDPANITVHTLALKKGS---RLMTEGGSLPTAEDVA-DMLDYAWTTLRGAG 399

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYG 273
              Y +    ++   S  N+ + + G
Sbjct: 400 YVPYYLYRQKYMSG-SFENVGWTKPG 424


>gi|194099404|ref|YP_002002505.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
 gi|193934694|gb|ACF30518.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
          Length = 473

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSI 71
           G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ +   L G   +
Sbjct: 62  GALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIKYLEKEMELLAPHLNGRHQL 121

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +      + G N
Sbjct: 122 AQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRDTVLMLGRLGFN 181

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY LP QT    +  
Sbjct: 182 RMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGLPHQTSESIKTT 241

Query: 191 LQRALSYAVDHLSLYQ 206
           +   LS   D L+LY 
Sbjct: 242 IDTVLSLDPDRLALYH 257


>gi|121996829|ref|YP_001001616.1| oxygen-independent coproporphyrinogen III oxidase [Halorhodospira
           halophila SL1]
 gi|121588234|gb|ABM60814.1| oxygen-independent coproporphyrinogen III oxidase [Halorhodospira
           halophila SL1]
          Length = 464

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 6/194 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           N L VYVH PFC   C YC  N  V   Y   QE +++    E++   QL G  R +  +
Sbjct: 54  NPLSVYVHVPFCRNVCFYCACNKIVTANYSRAQE-YLEHVFKEIELQAQLFGEHRRVEQL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             GGGTP+ ++  ++  ++  + + +T+  + N E +IE +P  VE+ +     + G NR
Sbjct: 113 HLGGGTPNYLKIDDLGRLVSKLREQFTLDDTDNREFSIEIDPRDVELEDIGRLAELGFNR 172

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ   E+    + R  +A    + I    R+ F   + DLIY LPKQT+  +E  L
Sbjct: 173 MSVGVQDFNEEVQHAVNRVQSAELCRSIIEEGRRHGFRSTNVDLIYGLPKQTVESFEQTL 232

Query: 192 QRALSYAVDHLSLY 205
              +    + L++Y
Sbjct: 233 DEVIELRPERLAIY 246


>gi|320191451|gb|EFW66101.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|326340026|gb|EGD63833.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125]
          Length = 419

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLSNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGA 298


>gi|240116348|ref|ZP_04730410.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|268602014|ref|ZP_06136181.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID18]
 gi|268586145|gb|EEZ50821.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID18]
          Length = 473

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSI 71
           G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ +   L G   +
Sbjct: 62  GALNKPLSLYIHIPFCNTICYYCGCNKIITKDKRRADTYIEYLEKEMELLAPHLNGRHQL 121

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +      + G N
Sbjct: 122 AQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRDTVLMLGRLGFN 181

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY LP QT    +  
Sbjct: 182 RMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGLPHQTSESIKTT 241

Query: 191 LQRALSYAVDHLSLYQ 206
           +   LS   D L+LY 
Sbjct: 242 IDTVLSLDPDRLALYH 257


>gi|153009960|ref|YP_001371175.1| coproporphyrinogen III oxidase [Ochrobactrum anthropi ATCC 49188]
 gi|151561848|gb|ABS15346.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           anthropi ATCC 49188]
          Length = 444

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  ++ +       ENF  S L+E++ + + LT   ++  + +
Sbjct: 46  SVSLYIHVPYCRQLCHYCGCHAKMAVRNDVVENFCTSLLSEIETVSKSLTARPNVVHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++ P+    IL  +   +  +  +E  IE +P +V     Q     GVNR SLG
Sbjct: 106 GGGTPSILNPRQFTSILAALRVAFDFAPEMEHAIELDPRTVTPQLVQTLALMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +  + +GR         A  L R +   R++FDLIY LP QT+       ++  
Sbjct: 166 VQDVDAEVQKAIGRIQPIETVAKAATLLREVGIDRLNFDLIYGLPLQTVETLRETCEKVA 225

Query: 196 SYAVDHLSLY 205
               D ++ Y
Sbjct: 226 VLKPDRVACY 235


>gi|293416947|ref|ZP_06659584.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291431523|gb|EFF04508.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 445

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLSNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|204930338|ref|ZP_03221315.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320742|gb|EDZ05944.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 413

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   + +   V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFEVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALIYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + L +Y L      E    +Y + +  DL+  +  +   +     +   +    +    N
Sbjct: 220 EELFIYPLYNMPRQENMHSYYVLAR--DLLCNAGYIQTSMRRFVLNPAPSAAAESCGFEN 277

Query: 256 HSFLGA---ESLHNLNY---WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
              LGA     L NL+Y   W         P   +  K+        I+   +S  K V 
Sbjct: 278 SLALGAGGRSYLGNLHYCSPW--------SPNLQTSRKI--------IQAFIDSADKTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+       L  ++    F++  L   +G+S+ D++     +   D        RQG+
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLELFIRQGY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|301020499|ref|ZP_07184586.1| radical SAM domain protein [Escherichia coli MS 69-1]
 gi|300398687|gb|EFJ82225.1| radical SAM domain protein [Escherichia coli MS 69-1]
          Length = 445

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I++ + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIINILREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|218702268|ref|YP_002409897.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|218372254|emb|CAR20116.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli IAI39]
          Length = 445

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|291518575|emb|CBK73796.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Butyrivibrio fibrisolvens 16/4]
          Length = 479

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 3/198 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   VY+  PFC   C YC F S+ +  +    +++I +   EM +  +    +S+++I
Sbjct: 153 DNGYSVYIGIPFCPSTCLYCSFTSYPIGLWTKKLDDYIDALEKEMAFTAEACKGKSLTTI 212

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++ +++  +L  + + +  S  +E TIEA  P S+ +   Q  +   V RI
Sbjct: 213 YIGGGTPTSLDAEHLERLLTLVDRYFNTSDLLEYTIEAGRPDSITLEKLQVMKNHPVTRI 272

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +       AR + F  ++ DLI  LP +T+      L 
Sbjct: 273 SINPQTMNQKTLDLIGRFHKVEDIHRVFGWARELGFKNINMDLILGLPGETIEDVAYTLS 332

Query: 193 RALSYAVDHLSLYQLTIE 210
                A D+L+++ L ++
Sbjct: 333 EVEKLAPDNLTVHSLALK 350


>gi|116329572|ref|YP_799291.1| coproporphyrinogen III oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332461|ref|YP_802178.1| coproporphyrinogen III oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116122465|gb|ABJ80358.1| Coproporphyrinogen oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116127328|gb|ABJ77420.1| Coproporphyrinogen oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 449

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ- 60
           ++L+   N +  + S SL +Y+H PFC   C +C  N+ + +    ++ ++++ LTE   
Sbjct: 35  EWLNKVRNRLRSENS-SLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYVETILTEYSN 93

Query: 61  WMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           ++ ++     R +  I  GGGTP+ +  +N+  +L  I +   VSS  + ++E +P    
Sbjct: 94  YLIKIPEISQRELKEIHLGGGTPTYLSERNLEALLRSILERMNVSSVPDFSLEVDPRRTR 153

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +     G  RISLGVQ  + +  R + R            L+R + +  ++FDLIY
Sbjct: 154 DTQLKVLHDFGFRRISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIY 213

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LPKQ +   +  +++ L    D ++ Y
Sbjct: 214 GLPKQNLKNMKRTVEKTLELRPDRIAFY 241


>gi|320332717|ref|YP_004169428.1| Radical SAM domain-containing protein [Deinococcus maricopensis DSM
           21211]
 gi|319754006|gb|ADV65763.1| Radical SAM domain protein [Deinococcus maricopensis DSM 21211]
          Length = 439

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 8/236 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   +L +YVH PFC  +C +C+  + V      +  ++ +   +   +R   G  S S 
Sbjct: 42  EARRNLYLYVHVPFCEMRCGFCNLFTTVGAPAALEAAYLDALERQAHAVRAQLGEVSFSR 101

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAGVNR 132
           I  GGGTP+ +E   +  + D +   +    + + T +E +P++            GV+R
Sbjct: 102 IALGGGTPTYLEAAELERVFDLLDGVFGARPDAQPTSVETSPATATPERLAVLAARGVSR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS  E  +R +GR+   +E  AA+   R      ++ DLIY L  QT   W+  L
Sbjct: 162 VSIGVQSFVESEVRSVGRSQRNAEVHAALSNIRAAGLGHLNIDLIYGLAHQTPETWQHSL 221

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + AL +A + L LY L +   T   ++ +  D      +  ++LY L ++   A+G
Sbjct: 222 EDALRWAPEELFLYPLYVRPLTGIGRLGRTWD------DERLELYRLGRAFLRANG 271


>gi|256028481|ref|ZP_05442315.1| coproporphyrinogen III oxidase [Fusobacterium sp. D11]
 gi|289766402|ref|ZP_06525780.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289717957|gb|EFD81969.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 469

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 5/212 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIVGDFLKTYSKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  +L  + +N  +S   E T EA    S+        +K  V+RI
Sbjct: 206 YFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNAQKLGIMKKYSVDRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LP++T  +    L +
Sbjct: 266 SLNPQSFNLKTLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGLPEETTKEILDTLSQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              Y +D+L+++ L  ++ +  +K  ++ +++
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFKESQERNII 357


>gi|15804047|ref|NP_290083.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933]
 gi|15833637|ref|NP_312410.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168746962|ref|ZP_02771984.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4113]
 gi|168753312|ref|ZP_02778319.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4401]
 gi|168759583|ref|ZP_02784590.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4501]
 gi|168765907|ref|ZP_02790914.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4486]
 gi|168772547|ref|ZP_02797554.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4196]
 gi|168779643|ref|ZP_02804650.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4076]
 gi|168785365|ref|ZP_02810372.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC869]
 gi|168797330|ref|ZP_02822337.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC508]
 gi|195935030|ref|ZP_03080412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808940|ref|ZP_03251277.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208814241|ref|ZP_03255570.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208818610|ref|ZP_03258930.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209395960|ref|YP_002272979.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217326043|ref|ZP_03442127.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. TW14588]
 gi|254795455|ref|YP_003080292.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261224817|ref|ZP_05939098.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254287|ref|ZP_05946820.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291284875|ref|YP_003501693.1| putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
           str. CB9615]
 gi|12518212|gb|AAG58644.1|AE005576_3 putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EDL933]
 gi|13363857|dbj|BAB37806.1| putative coproporphyrinogen oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187771599|gb|EDU35443.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188018368|gb|EDU56490.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4113]
 gi|189002627|gb|EDU71613.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189359172|gb|EDU77591.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189364804|gb|EDU83223.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189369751|gb|EDU88167.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4501]
 gi|189374481|gb|EDU92897.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC869]
 gi|189379883|gb|EDU98299.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC508]
 gi|208728741|gb|EDZ78342.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208735518|gb|EDZ84205.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208738733|gb|EDZ86415.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209157360|gb|ACI34793.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217322264|gb|EEC30688.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. TW14588]
 gi|254594855|gb|ACT74216.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290764748|gb|ADD58709.1| Putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
           str. CB9615]
 gi|320639818|gb|EFX09412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645318|gb|EFX14334.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str.
           493-89]
 gi|320650629|gb|EFX19095.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H
           2687]
 gi|320655823|gb|EFX23746.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661605|gb|EFX29020.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666628|gb|EFX33611.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337500|gb|EGD61335.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044]
          Length = 445

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLSNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|163782298|ref|ZP_02177296.1| coproporphyrinogen III oxidase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882331|gb|EDP75837.1| coproporphyrinogen III oxidase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 456

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 3/219 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
           + +    L +Y H PFC   C YC  N  +   K  +  ++     EM  + +L    R 
Sbjct: 45  SNERKTPLSLYFHIPFCESGCYYCGCNIIISHRKGIERPYLDRVYREMDMVSELLDRERR 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +EP  I   +  I + +T S + E++IE +P        Q  R  G 
Sbjct: 105 VEQLHWGGGTPNYLEPDEIREFMGEIKRRFTFSEDAEVSIEIDPRYATDEQLQTIRDVGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+E+  R + R          +   R + F  ++ DLIY LP QT   ++ 
Sbjct: 165 NRVSMGLQDLDEKVQRAINRIQPYELMERTMKRLRELGFYSINIDLIYGLPYQTRESFQR 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            +++ +    + +++Y           + H D D  LPS
Sbjct: 225 TVEKVIELDPNRIAVYSFAYVPWVKPIQKHIDPD-TLPS 262


>gi|284923527|emb|CBG36622.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli 042]
          Length = 445

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLTIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|117620055|ref|YP_854800.1| coproporphyrinogen III oxidase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561462|gb|ABK38410.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 457

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 4/221 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +L +YVH PFC K C YC  N  + R++   + ++     E++    L   R ++ + 
Sbjct: 50  ARNLSLYVHIPFCHKLCYYCGCNKVITRHRHKADQYLDFLEQEIKAQAPLFKQRLVTQLH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ ++      ++  + +++  +   EI+IE +P  +E++     R+ G NRISL
Sbjct: 110 WGGGTPTYLDEPQTRRLMAMLREHFHFAEEGEISIEVDPREIELSMLDVLREIGFNRISL 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   ++    + R  +     A +  AR + F   + DLIY LP Q    +   L+  
Sbjct: 170 GVQDFNKEVQVAVNREQDNDFIRAMLERARELGFRSTNLDLIYGLPHQNRESFHHTLEEV 229

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAV 233
           L      LS++       + F   H  K+ D+  P E +A+
Sbjct: 230 LKTDPARLSIFNYA-HLPSRFAAQHKLKEADMPAPQEKLAM 269


>gi|168187501|ref|ZP_02622136.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum C str. Eklund]
 gi|169294596|gb|EDS76729.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum C str. Eklund]
          Length = 480

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 124/264 (46%), Gaps = 9/264 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ +Y+  PFC   C YC F S+    R      E +++    E+  +++    R  +I 
Sbjct: 150 NISIYIGMPFCPTTCLYCSFASNPIGGRNTSKMVEPYLEKLNEEIDIIKEFIDKRELNIE 209

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGV 130
            ++FGGGTP+ +       ++  + +++     V E  +E   P S+     +  +K  V
Sbjct: 210 CVYFGGGTPTSVNENQFENLIKKVHESFISGRKVKEFNVECGRPDSITEGKLKTMKKYNV 269

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ E +L+ +GR+H   +      LAR + F  ++ D+I  LP +T++  E 
Sbjct: 270 SRISINPQTMNEDTLKLIGRHHTVKDISEKFKLARKLGFDNINMDIIVGLPNETLSHIET 329

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                L    D L+++ ++I++G+  Y+      + +  +N   ++Y  T  +     + 
Sbjct: 330 TCTEILKLNPDSLTVHGMSIKRGSKLYEEIYIDKVRILEQNSLNEMYKRTSKLAEELNMK 389

Query: 250 AYEISNHSFLGAESLHNLNYWRYG 273
            Y +     +    + N+ Y R+G
Sbjct: 390 PYYMYRQKNMVG-HMENVGYCRHG 412


>gi|91213008|ref|YP_542994.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117625785|ref|YP_859108.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218560578|ref|YP_002393491.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|237703269|ref|ZP_04533750.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|331659808|ref|ZP_08360746.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
 gi|91074582|gb|ABE09463.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli UTI89]
 gi|115514909|gb|ABJ02984.1| putative oxygen independent coproporphyrinogen III oxidase ChuW
           [Escherichia coli APEC O1]
 gi|218367347|emb|CAR05126.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli S88]
 gi|226902533|gb|EEH88792.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|294491802|gb|ADE90558.1| HugW [Escherichia coli IHE3034]
 gi|307628582|gb|ADN72886.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315286173|gb|EFU45609.1| radical SAM domain protein [Escherichia coli MS 110-3]
 gi|323950177|gb|EGB46060.1| HemN protein [Escherichia coli H252]
 gi|323954735|gb|EGB50516.1| HemN protein [Escherichia coli H263]
 gi|324009284|gb|EGB78503.1| radical SAM domain protein [Escherichia coli MS 57-2]
 gi|331053023|gb|EGI25056.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
          Length = 445

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|260890330|ref|ZP_05901593.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
 gi|260859950|gb|EEX74450.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
          Length = 454

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 129/284 (45%), Gaps = 11/284 (3%)

Query: 11  MTGQGSNSLG-VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           M     N LG +YVH P+C K C +C+ N   ++     E++    ++E +   +    +
Sbjct: 55  MEKPAENELGTIYVHTPYCDKICSFCNLNR--QQIDNDLEDYTNFLVSEFEKYGKTPYMK 112

Query: 70  S--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           S  I+ IFFGGGTP++ +   +  IL  I  N+T++ + E T+E    ++     +   K
Sbjct: 113 SKKINVIFFGGGTPTIYKEHQLERILKAINDNFTLTDDCEFTLETTLHNLNPKKIKILEK 172

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQ 186
            GVNR+S+G+Q+  ++    L R  +  E +  +   +  F  M   D+IY  P +T+ +
Sbjct: 173 GGVNRLSVGIQTFSDRGRNILNRTFSKEETVKRLRNLKESFSGMVCTDIIYNYPDETVEE 232

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              + +      +D  S Y L I +G+   K  ++  L L  E +  D       + S  
Sbjct: 233 VLEDARIVKELKIDSTSFYSLMIYEGSQMSKDIRNNTLELNYE-LEKDFELHDAFLKSML 291

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRY----GDYIGIGPGAHSRV 286
               YE+  H+ +  +      Y R      D + IG GA  ++
Sbjct: 292 EGGEYEVMEHTKIVRKGRDEYRYIRNTHQGKDILPIGVGAGGKI 335


>gi|321314705|ref|YP_004206992.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
 gi|291483457|dbj|BAI84532.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020979|gb|ADV95965.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
          Length = 501

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 27/292 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PR 69
            + + +Y+  PFC  KC YC F ++  +   GQ   + SFL  + +  Q  G        
Sbjct: 168 KDEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKEHDV 224

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRK 127
            +++I+FGGGTP+ I  + + L+ + + +++    N+ EIT+EA  P ++         K
Sbjct: 225 KVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNK 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + +
Sbjct: 285 YDIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKE 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L        + L+++ L+ ++ +   + +K    V   E V+  + +   + T  H
Sbjct: 345 FRHSLSETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVAGREEVSQMMEDAV-AWTKEH 402

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           G   Y            E   +S  G ES++N+         IGIG GA S+
Sbjct: 403 GYVPYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASK 454


>gi|16081159|ref|NP_388865.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308821|ref|ZP_03590668.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221313144|ref|ZP_03594949.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221318068|ref|ZP_03599362.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221322343|ref|ZP_03603637.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|59799598|sp|Q796V8|HEMZ_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 2;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|32468726|emb|CAB12823.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 501

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 27/292 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PR 69
            + + +Y+  PFC  KC YC F ++  +   GQ   + SFL  + +  Q  G        
Sbjct: 168 KDEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKEHDV 224

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRK 127
            +++I+FGGGTP+ I  + + L+ + + +++    N+ EIT+EA  P ++         K
Sbjct: 225 KVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNK 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + +
Sbjct: 285 YDIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKE 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L        + L+++ L+ ++ +   + +K    V   E V+  + +   + T  H
Sbjct: 345 FRHSLSETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVAGREEVSQMMEDAV-AWTKEH 402

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           G   Y            E   +S  G ES++N+         IGIG GA S+
Sbjct: 403 GYVPYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASK 454


>gi|255068472|ref|ZP_05320327.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sicca
           ATCC 29256]
 gi|255047273|gb|EET42737.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sicca
           ATCC 29256]
          Length = 418

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 4/200 (2%)

Query: 10  NMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLT 66
           N  G G+    L +Y+H PFC   C YC  N  + + K   + +I+    EM+ +   L 
Sbjct: 2   NQRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMELLAPHLG 61

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G   ++ + FGGGTP+ +    I  +   I K++ +    E +IE +P  V         
Sbjct: 62  GRHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFQLIPGGEYSIEIDPRKVSRETVLMLG 121

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY LP QT  
Sbjct: 122 KLGFNRMSVGIQDFDPKVQAAVNRIQSYDETKEVIDAAREAGFKSVSVDLIYGLPHQTAE 181

Query: 186 QWEMELQRALSYAVDHLSLY 205
             +  +   LS   D L+LY
Sbjct: 182 SIKTTIDTVLSLDPDRLALY 201


>gi|197335677|ref|YP_002156027.1| coproporphyrinogen III oxidase [Vibrio fischeri MJ11]
 gi|197317167|gb|ACH66614.1| coproporphyrinogen III oxidase [Vibrio fischeri MJ11]
          Length = 458

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 4/220 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           T Q S    +YVH PFC  +C YC+F  H    ++ QE F  + L E++W  Q   T   
Sbjct: 58  TTQISKHRCLYVHIPFCRVRCTYCNFFQHASSKQLVQEYF-DALLVELKWKAQFAWTQAA 116

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ +    I  +   I   + ++ + EIT+E   +  +   F    + G
Sbjct: 117 PFHAVYIGGGTPTDLTADQIEQLGKAIRSQFPLTPDCEITLEGRINRFDEEMFDKSLEGG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   +  R   R  +    +  I  L+ +    +  DL+Y LP QT   W+
Sbjct: 177 FNRFSFGVQSFNTKVRRSAKRLDDKEYVLRRIQELSDSEQAPIVVDLLYGLPYQTSEIWQ 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            +L   L      + LYQL    GT    M   G L  P+
Sbjct: 237 QDLNDFLETNAHGVDLYQLIEMGGTPMKGMIDKGKLPQPA 276


>gi|153854670|ref|ZP_01995920.1| hypothetical protein DORLON_01918 [Dorea longicatena DSM 13814]
 gi|149752774|gb|EDM62705.1| hypothetical protein DORLON_01918 [Dorea longicatena DSM 13814]
          Length = 501

 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 105/199 (52%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +YV  PFC   C YC F+S  + R+K   + ++ +   E++++ + +  + +++I+
Sbjct: 169 NGYSLYVGIPFCPSVCSYCSFSSGPLDRWKEKVDAYVDALCKELEFIAERSKNKKLNTIY 228

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +  + +  ++  I + ++    +E T+EA  P S+     +  +   + RIS
Sbjct: 229 IGGGTPTTLTAEQLERLMSWIDEKFSREYLLEYTVEAGRPDSITEEKLKVIKNHDITRIS 288

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+++++L  +GR H   E   A  LAR   F  ++ D+I  LP + ++  E  L +
Sbjct: 289 INPQSMQQKTLDVIGRKHTVEEIKEAYALARKTGFDNINMDIIAGLPGEDISDMEDTLAQ 348

Query: 194 ALSYAVDHLSLYQLTIEKG 212
                 D L+++ L I++ 
Sbjct: 349 IAQMHPDSLTVHSLAIKRA 367


>gi|26250136|ref|NP_756176.1| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|26110565|gb|AAN82750.1|AE016768_168 Putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli CFT073]
          Length = 445

 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|307257592|ref|ZP_07539352.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306863895|gb|EFM95818.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 607

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 57  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIEELAYEAS-IRQGSG--KIKAVYFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 114 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 173

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 174 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 233

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 234 PLSGLDIY 241


>gi|319638239|ref|ZP_07993002.1| coproporphyrinogen III oxidase [Neisseria mucosa C102]
 gi|317400512|gb|EFV81170.1| coproporphyrinogen III oxidase [Neisseria mucosa C102]
          Length = 606

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 7/241 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQL-TGPRSISSIFFGG 78
            Y+H PFC   C +C F  +   +K  Q + +    + EM    ++ TG   I +++FGG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNA--WKDSQSSVYTDKIIEEMAAEAEVRTGKGKIRAVYFGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  +++  ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GVQ
Sbjct: 113 GTPTALLTEDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLEKAQACLEAGANRISIGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +      R LGR H+  EA   +     +   +  DLI+ LP QT   W+ ++ RA    
Sbjct: 173 TFNTAIRRRLGRKHSGDEAFEYLEKLCELDAVIVADLIFGLPNQTDEVWQNDIARAAELP 232

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  L  Y   +       +M + G    P   ++  D Y  T       G    ++SN  
Sbjct: 233 LSGLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWE--QVSNSH 290

Query: 258 F 258
           F
Sbjct: 291 F 291


>gi|118444631|ref|YP_877920.1| coproporphyrinogen III oxidase [Clostridium novyi NT]
 gi|118135087|gb|ABK62131.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           novyi NT]
          Length = 477

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 120/256 (46%), Gaps = 8/256 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQ 60
           ++  E     +   ++ +Y+  PFC   C YC F S+    R      E +++    E+ 
Sbjct: 136 IAKAERARVNKDPKNISIYIGMPFCPTTCLYCSFASNPIAGRNTSKMVEPYLEKLNEEID 195

Query: 61  WMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    +  +I  ++FGGGTP+ I       ++  + +++     V E  +E   P S
Sbjct: 196 IIKEFIDKKGLNIECVYFGGGTPTSINENQFENLIKKVHESFISGRKVKEFNVECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +     +  +K  V+RIS+  Q++ E +L+ +GR+H   + I   ++AR I F  ++ D+
Sbjct: 256 ITEGKLKTMKKYNVSRISINPQTMNEDTLKLIGRHHTVEDIIEKFNMARKIGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I  LP +T+   E      L    D L+++ ++I++G+  Y+      + +  +N   ++
Sbjct: 316 IVGLPNETLNHIENTCTEILKLKPDSLTVHGMSIKRGSKLYEEIYIDKVRILEQNSLNEM 375

Query: 236 YNLTQSITSAHGLHAY 251
           Y  T  +     +  Y
Sbjct: 376 YERTSKLAEELNMKPY 391


>gi|168237627|ref|ZP_02662685.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194737437|ref|YP_002116931.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194712939|gb|ACF92160.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289340|gb|EDY28705.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 413

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 160/377 (42%), Gaps = 30/377 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   + +   V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFEVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + L +Y L        Y M +  ++      VA DL  L  +  +   +  + ++   F 
Sbjct: 220 EELFIYPL--------YNMPRQENM-HSYYVVARDL--LRNAGYTQTSMRRFVLNPAPFA 268

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR-----KNGHA 314
            AES    N         +  GA  R  +G+         + ++  K+++      +   
Sbjct: 269 AAESCGFEN--------SLALGAGGRSYLGNLHYCSPWSSNLQTSRKIIQAFIDSADKTV 320

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQ 372
           +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  +  
Sbjct: 321 INHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLELFIRQGYCYQ-N 379

Query: 373 FSRLRCTQRGMTMLDSV 389
            SRLR T+ GM + D +
Sbjct: 380 GSRLRLTETGMALSDCL 396


>gi|331685157|ref|ZP_08385743.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
 gi|331077528|gb|EGI48740.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
          Length = 445

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|307248565|ref|ZP_07530580.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306854915|gb|EFM87103.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 619

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 69  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIEELAYEAS-IRQGSG--KIKAVYFG 125

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 126 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 185

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 186 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 245

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 246 PLSGLDIY 253


>gi|237722905|ref|ZP_04553386.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
 gi|299146603|ref|ZP_07039671.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Bacteroides sp. 3_1_23]
 gi|229447427|gb|EEO53218.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
 gi|298517094|gb|EFI40975.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Bacteroides sp. 3_1_23]
          Length = 425

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 170/407 (41%), Gaps = 50/407 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---- 59
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LVPYLKQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q +  LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   + 
Sbjct: 83  QQLSPLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLI 176
                 ++AGV R+S+GVQS  ++ L  L R       ++A+ AI   +  FP  + DLI
Sbjct: 143 TRLDLLKQAGVARVSIGVQSFLDEELTALKRRPRQDMINQALEAIR--KRQFPFFNIDLI 200

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y +  QT+  +   L++AL +  + L +Y L +  GT   +   D D+       A DL 
Sbjct: 201 YGIKGQTVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERESD-DVCFQMYCAACDLL 259

Query: 237 NLTQSITSA------HGLHAYEISNHSFL-------GAESLHNLNYWRYGDYIGIGPGAH 283
                + ++      H     EIS    +       G   L NL+Y              
Sbjct: 260 KDRGFLQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYA------------- 306

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +R  V    +A  I+ +  +    V +NG        LS E++   F++  L    G+  
Sbjct: 307 TRYTVCQRCIAGEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDK 360

Query: 344 KDWEMLAGRNLD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +++   G + D +   R L  + +IE     R+  T  GM   D +
Sbjct: 361 TEYKRRFGESPDNVTLFRQLAERQWIENTDNGRVCLTSEGMAYSDYI 407


>gi|110643748|ref|YP_671478.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|227883662|ref|ZP_04001467.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
 gi|300985061|ref|ZP_07177267.1| radical SAM domain protein [Escherichia coli MS 45-1]
 gi|300987452|ref|ZP_07178220.1| radical SAM domain protein [Escherichia coli MS 200-1]
 gi|301050257|ref|ZP_07197148.1| radical SAM domain protein [Escherichia coli MS 185-1]
 gi|110345340|gb|ABG71577.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli 536]
 gi|222035213|emb|CAP77958.1| oxygen independent coproporphyrinogen III oxidase [Escherichia coli
           LF82]
 gi|227839541|gb|EEJ50007.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
 gi|300298029|gb|EFJ54414.1| radical SAM domain protein [Escherichia coli MS 185-1]
 gi|300306144|gb|EFJ60664.1| radical SAM domain protein [Escherichia coli MS 200-1]
 gi|300408221|gb|EFJ91759.1| radical SAM domain protein [Escherichia coli MS 45-1]
 gi|307555606|gb|ADN48381.1| putative coproporphyrinogen III oxidase [Escherichia coli ABU
           83972]
 gi|312948061|gb|ADR28888.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315291787|gb|EFU51141.1| radical SAM domain protein [Escherichia coli MS 153-1]
 gi|315296048|gb|EFU55357.1| radical SAM domain protein [Escherichia coli MS 16-3]
 gi|324014495|gb|EGB83714.1| radical SAM domain protein [Escherichia coli MS 60-1]
          Length = 445

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|191170321|ref|ZP_03031874.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
 gi|190909129|gb|EDV68715.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
          Length = 419

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + +   EM+    L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGA 298


>gi|313906018|ref|ZP_07839371.1| Coproporphyrinogen dehydrogenase [Eubacterium cellulosolvens 6]
 gi|313469131|gb|EFR64480.1| Coproporphyrinogen dehydrogenase [Eubacterium cellulosolvens 6]
          Length = 524

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 6/256 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +YV  PFC   C YC F SH +  Y+   + + ++   E++++ +      + S++ GGG
Sbjct: 205 LYVGIPFCPTICLYCSFGSHRMDTYRDMVKPYFEALYKELRFISEEMKDWHLDSLYIGGG 264

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  +L  + KN+ + +  E TIEA  P ++  +  +  R+  V RIS+  Q
Sbjct: 265 TPTSVSAEQLRELLQELEKNFDLENLAEFTIEAGRPDTITEDKLRVMREFPVTRISINPQ 324

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR+H   +      LAR++ F  ++ D+I  LP +   + +  L R    
Sbjct: 325 TMNQKTLDLIGRHHTVEQTREIFLLARSLGFDNINMDIIVGLPGEGAAEVQETLDRIKEM 384

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D L+++ L +++ T    + KD    +  EN +  +     S  +  G+  Y +    
Sbjct: 385 DPDSLTVHSLALKRATRL-NLFKDSYEPISFEN-SESIMEAAASCAADMGMSPYYLYRQK 442

Query: 258 FLGAESLHNLNYWRYG 273
            + A +  N+ Y R G
Sbjct: 443 NM-AGNFENVGYARPG 457


>gi|307262005|ref|ZP_07543660.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306868288|gb|EFN00110.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 620

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 70  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIEELAYEAS-IRQGSG--KIKAVYFG 126

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 127 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 186

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 187 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 246

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 247 PLSGLDIY 254


>gi|303253399|ref|ZP_07339542.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302647744|gb|EFL77957.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 604

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 54  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIEELAYEAS-IRQGSG--KIKAVYFG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 111 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 171 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 230

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 231 PLSGLDIY 238


>gi|212640118|ref|YP_002316638.1| coproporphyrinogen III oxidase [Anoxybacillus flavithermus WK1]
 gi|212561598|gb|ACJ34653.1| Coproporphyrinogen III oxidase hemZ [Anoxybacillus flavithermus
           WK1]
          Length = 499

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 110/207 (53%), Gaps = 12/207 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--S 72
           SN + +Y+  PFC  KC YC F ++  + K G  ++F+     EM+ + +    R+I  +
Sbjct: 173 SNEVSIYIGIPFCPTKCAYCTFPAYAIQGKQGSVDSFLFGLHYEMEQIGKFLKERNIPIT 232

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE----ITIEA-NPSSVEVNNFQGYRK 127
           +I++GGGTP+ I  + +  +    A  + V  NVE    IT+EA  P ++        +K
Sbjct: 233 TIYYGGGTPTSITAEEMDALY---AHMYRVFPNVERVREITVEAGRPDTITPEKLAVLKK 289

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++LR +GR+H   E I   HLAR      ++ DLI  LP + + Q
Sbjct: 290 WNIDRISINPQSYIQETLRAIGRHHTVEETIEKFHLARESGMNNINMDLIIGLPGEGVKQ 349

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGT 213
           ++  L +      + L+++ L+ ++ +
Sbjct: 350 FDFTLAQTEKLMPESLTVHTLSFKRAS 376


>gi|170726355|ref|YP_001760381.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
 gi|169811702|gb|ACA86286.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
          Length = 448

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 172/383 (44%), Gaps = 18/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSIS 72
           G   +G+YVH PFC + C  C +  H +  K     ++ +  TE+     R       I+
Sbjct: 37  GKQQMGIYVHIPFCNRLCFSCPYIKH-QTDKTITRRYLDALKTEISNYAARPYVQDHEIT 95

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             + GGGTP+ +    +  +L  +     +S +VE++IE  P  +     +     GV R
Sbjct: 96  LGYIGGGTPTALSSAELEELLGHLHSELNMSDDVELSIETTPIDITKKKAETLYNNGVKR 155

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ+  ++ L  +GR  +      AI + +   F  ++ DL++ L  QTM  WE  L
Sbjct: 156 ISLGVQTFVQEELESIGRPSDPKMLENAIKICQEAGFTNINIDLMHGLNGQTMESWEYSL 215

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +A+   V  +S Y   +E   +  K  K     +P+ +V  +++       + +G   Y
Sbjct: 216 DKAIELGVTCVSFYTY-MEFAQVSTKRRKLPP--VPTTDVVDEMFMFAAKKLTENGFDGY 272

Query: 252 EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
                +  G +  +    W      I +GP A   +K   +    SI K    ++++V  
Sbjct: 273 FGDCFAKPGYQPRYGERSWSENIPIIPLGPTATGHLKDHWYFNEPSINK----YIEVVNS 328

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECE-RNLQRQGF 367
               +   +++S E+     +++G++  + +  K ++ L G +     + E ++L+ +G 
Sbjct: 329 GQLPISMGQYISKEEAIRRGMILGVKASK-VDRKMFKHLYGVDFVEKFQSEIQDLESKGL 387

Query: 368 IERVQFSRLRCTQ-RGMTMLDSV 389
           +E  Q + L+ T  +G   LD++
Sbjct: 388 VELTQ-NELKVTDPKGWYYLDNI 409


>gi|323703392|ref|ZP_08115041.1| Coproporphyrinogen dehydrogenase [Desulfotomaculum nigrificans DSM
           574]
 gi|323531661|gb|EGB21551.1| Coproporphyrinogen dehydrogenase [Desulfotomaculum nigrificans DSM
           574]
          Length = 491

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR--S 70
           Q  + + VY+  PFC  +C YC F S+ ++R++   E F++S L E++ + +        
Sbjct: 162 QARHLVAVYIGIPFCPSRCLYCSFPSYSIKRHRNMVEPFMKSLLEEIKLVGEALQAHGLK 221

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
           + +I+ GGGTP+ +    +  +L+ +          E T+E   P ++  +      + G
Sbjct: 222 VQTIYLGGGTPTSLNLDQLRCLLEAVQSYLKQPDTREFTVEGGRPDTLNQDVLGLLAQYG 281

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V R+S+  QS+ +Q+L  +GR H   +   A+ LAR   FP ++ DLI  LP +T     
Sbjct: 282 VTRLSINPQSMNQQTLEAIGRAHTVEDVYRAVELARQFNFPTLNMDLIIGLPGETTRDVS 341

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHG 247
             + R +    ++L+++ L +++ +    + +  D   P + + AV ++  T        
Sbjct: 342 QTVARIVKLKPENLTVHALALKRAS---DLKQRLDQFPPATADEAVAMWQETAQGARKLE 398

Query: 248 LHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           +H Y            E   ++  G E ++N+         IG+G GA S+
Sbjct: 399 MHPYYMYRQKQMVGNLENIGYTLPGHECIYNIQMIEERQTIIGLGVGAGSK 449


>gi|303250941|ref|ZP_07337131.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650213|gb|EFL80379.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 605

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 55  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIEELAYEAS-IRQGSG--KIKAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 112 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 172 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 231

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 232 PLSGLDIY 239


>gi|332159987|ref|YP_004296564.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664217|gb|ADZ40861.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862384|emb|CBX72543.1| hypothetical protein YEW_HJ33030 [Yersinia enterocolitica W22703]
          Length = 437

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 11/269 (4%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  N       V   +++   L+ M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQTDSTVRYTDYLLRELS-MEASSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + KN  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHSIISQLRKNLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPKQTMTQWEMELQRA 194
           +   +  + +GR  +  E   AIH   N+  R    +  DL++ LP QT   W+ +L   
Sbjct: 175 TFNTRIRQRMGRKASRDE---AIHFLTNLASRDRAAVVCDLMFGLPHQTPETWQEDLAIV 231

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S
Sbjct: 232 RQLPLDGVDLYALNLLPTTPLAKSVENNRIELPTLAQQCDFYCSGAENLAQAGWHQLSNS 291

Query: 255 NHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
           + +    E +L+NL   +  D + +G GA
Sbjct: 292 HWAHTTRERNLYNLLIKQGADCLALGSGA 320


>gi|198282445|ref|YP_002218766.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665989|ref|YP_002424644.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198246966|gb|ACH82559.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518202|gb|ACK78788.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 463

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 7/201 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTG 67
           +N +G+    L +Y H PFC   C YC     V R+      ++     EM   R  + G
Sbjct: 51  SNTSGR---PLSLYFHIPFCEHLCFYCACTKVVTRHHEWGTPYVAHLDQEMALTRAHIDG 107

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGY 125
            R +  + FGGGTP+ +   ++ ++LD I K++ +      E  IE +P ++E    +  
Sbjct: 108 NRPVDQLHFGGGTPTFLRRHDMTVLLDSIRKHFLLLPDDRGEYGIEIDPRALEPGTLRLL 167

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NRIS+GVQ L+    + + R  + +     I  AR + F  +S DLIY LP QT 
Sbjct: 168 RDFGFNRISIGVQDLDTAVQKAVHREQSFALTAGVIGEARQLGFRSVSLDLIYGLPLQTP 227

Query: 185 TQWEMELQRALSYAVDHLSLY 205
             +   L+  L+   D LS++
Sbjct: 228 ESFARTLEAVLAMRPDRLSVF 248


>gi|170680480|ref|YP_001745771.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170518198|gb|ACB16376.1| putative coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
          Length = 445

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|168467342|ref|ZP_02701179.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195630164|gb|EDX48804.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 413

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 165/384 (42%), Gaps = 44/384 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQ 365
            +G+       L  ++    F++  L   +G+S+ D++      A R+   + ER +Q Q
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFP-DLERFIQ-Q 373

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G+  +   SRLR T+ GM + D +
Sbjct: 374 GYCYQNS-SRLRLTETGMALSDCL 396


>gi|239831490|ref|ZP_04679819.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
 gi|239823757|gb|EEQ95325.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
          Length = 444

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  ++ +       ENF  + L+E++ + + LT   ++  + +
Sbjct: 46  SVSLYIHVPYCRQLCHYCGCHAKMAVRNDVVENFCTALLSEIETVSKSLTARPNVVHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++ P+    IL  +   +  S  +E  IE +P +V     +     GVNR SLG
Sbjct: 106 GGGTPSILNPRQFTSILAALRVAFDFSPEMEHAIELDPRTVTPQLARTLSLMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +  + +GR         A  L R +   R++FDLIY LP QT+       ++  
Sbjct: 166 VQDIDAEVQKAIGRIQPIETVAKAASLLREVGIDRLNFDLIYGLPLQTVETLRETCEKVA 225

Query: 196 SYAVDHLSLY 205
           +   D ++ Y
Sbjct: 226 ALKPDRVACY 235


>gi|329118052|ref|ZP_08246765.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327465940|gb|EGF12212.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 469

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 2/207 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y++       G  +  L +Y+H PFC   C YC  N  + + K   + ++     E + 
Sbjct: 47  EYIATLAQRGAGALNKPLSLYIHIPFCDTICYYCGCNKIITKDKTRADEYLDYLEREAEL 106

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  +   I +++T+    E +IE +P  V  +
Sbjct: 107 LAPHLNGKNPLAQLHFGGGTPTFLSDGQLDRVFAMIRRHFTLLGEGEYSIEIDPRKVSRD 166

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 167 TVHHLGRLGFNRMSVGIQDFDPKVQAAVNRIQSVEETRNVIEAAREAGFKSVSVDLIYGL 226

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQ 206
           P QT+   +  +   LS   D L+LY 
Sbjct: 227 PHQTLDSIKPTIDTVLSLDPDRLALYH 253


>gi|313205039|ref|YP_004043696.1| oxygeN-independent coproporphyrinogen iii oxidase [Paludibacter
           propionicigenes WB4]
 gi|312444355|gb|ADQ80711.1| oxygen-independent coproporphyrinogen III oxidase [Paludibacter
           propionicigenes WB4]
          Length = 458

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           S+ +YVH PFC + C +C  N+           +I   L E+  + Q +   R +S + +
Sbjct: 50  SISIYVHIPFCPQLCFFCGCNTSAFESAAKVRRYIDCVLKEIDTVAQHIDKKRKVSQVHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ I    I  I++ IA ++  + N EI IE +P+ + + +       G NR+S+G
Sbjct: 110 GGGTPNSINFDYIQEIMEKIASHFEYTKNAEIAIECSPAYLTMEDIDRLAAIGFNRVSMG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q    + L+ + R          +  L +N F  ++ DL+Y LP QT+  ++  +++A+
Sbjct: 170 IQDFHPEVLKAINRREPKFPIEQVMERLRQNNFKGINLDLVYGLPLQTLESFKENIEKAI 229

Query: 196 SYAVDHLSLY 205
           S + D +  +
Sbjct: 230 SLSPDRIVTF 239


>gi|307253174|ref|ZP_07535052.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859359|gb|EFM91394.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 607

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 57  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIEELAYEAS-IRQGSG--KIKAVYFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 114 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 173

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 174 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 233

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 234 PLSGLDIY 241


>gi|124027245|ref|YP_001012565.1| oxygen-independent coproporphyrinogen III oxidase [Hyperthermus
           butylicus DSM 5456]
 gi|123977939|gb|ABM80220.1| Oxygen-independent coproporphyrinogen III oxidase [Hyperthermus
           butylicus DSM 5456]
          Length = 435

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 8/201 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            S    +Y+H PFC +  P C F   VR   ++     +I + L E+ W+        I 
Sbjct: 54  ASGHYALYIHMPFCHR--PLCTFCCFVRYPFHEKRHREYIDALLQEISWLASTAEGAHIE 111

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPS I+  ++A ++D + + +     V+++ EANP  +        R AGV+R
Sbjct: 112 TLYIGGGTPS-IDVYSLARVIDAVREAF--GGKVQVSTEANPRDLTDEAVSVLRSAGVSR 168

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+LE++ L  LGR +N  E +  A+ L +  F  ++ D+I+ +   T      E 
Sbjct: 169 LSIGVQALEQKRLLELGRLNNTVEDVYRAVDLVKGKFETVNIDIIWGIRSDTPAVVAREA 228

Query: 192 QRALSYAVDHLSLYQLTIEKG 212
            RALS  VD ++ Y L    G
Sbjct: 229 ARALSLPVDQVTFYPLMPAPG 249


>gi|307246440|ref|ZP_07528513.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250798|ref|ZP_07532727.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255423|ref|ZP_07537230.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259875|ref|ZP_07541589.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307264202|ref|ZP_07545793.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306852644|gb|EFM84876.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857157|gb|EFM89284.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861607|gb|EFM93594.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866045|gb|EFM97919.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306870448|gb|EFN02201.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 620

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 70  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIKELAYEAS-IRQGSG--KIKAVYFG 126

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 127 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 186

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 187 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 246

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 247 PLSGLDIY 254


>gi|165976952|ref|YP_001652545.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877053|gb|ABY70101.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 605

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 55  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIKELAYEAS-IRQGSG--KIKAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 112 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 172 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 231

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 232 PLSGLDIY 239


>gi|145220174|ref|YP_001130883.1| coproporphyrinogen III oxidase [Prosthecochloris vibrioformis DSM
           265]
 gi|145206338|gb|ABP37381.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 472

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           ++ + +Y+H P+C   C +C  N+H  +    ++ ++++ L E Q ++    G  ++  +
Sbjct: 49  TSGISMYIHIPYCENHCYFCGCNAHRTQDHSFEKPYLEALLKEWQMYLDVFPGTLNVKEM 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+ L+++G+  +         + E NP S    +      AG  R+S
Sbjct: 109 HIGGGTPTFFSPENLTLLIEGLYSHVNRMEGYVFSFETNPRSTTKEHLVALYNAGFRRLS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      + +
Sbjct: 169 FGIQDFDPIVQKEINRIQSFELVKEKVDLAREIGFTSVNFDLVYGLPKQTLATITDTIDK 228

Query: 194 ALSYAVDHLSLY 205
            +    D L+ Y
Sbjct: 229 VMQLRPDRLAFY 240


>gi|190150852|ref|YP_001969377.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915983|gb|ACE62235.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 606

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 56  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIKELAYEAS-IRQGSG--KIKAVYFG 112

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 113 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 172

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 173 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 232

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 233 PLSGLDIY 240


>gi|126208987|ref|YP_001054212.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           L20]
 gi|126097779|gb|ABN74607.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 605

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 55  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIKELAYEAS-IRQGSG--KIKAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 112 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 172 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 231

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 232 PLSGLDIY 239


>gi|2226152|emb|CAA74441.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 346

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 27/291 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRS 70
           + + +Y+  PFC  KC YC F ++  +   GQ   + SFL  + +  Q  G         
Sbjct: 14  DEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHYEMQKIGEWLKEHDVK 70

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKA 128
           +++I+FGGGTP+ I  + + L+ + + +++    N+ EIT+EA  P ++         K 
Sbjct: 71  VTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNKY 130

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
            ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + ++
Sbjct: 131 DIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKEF 190

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L        + L+++ L+ ++ +   + +K    V   E V+  + +   + T  HG
Sbjct: 191 RHSLSETEKLMPESLTVHTLSFKRASEMTR-NKHKYKVAGREEVSQMMEDAV-AWTKEHG 248

Query: 248 LHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
              Y            E   +S  G ES++N+         IGIG GA S+
Sbjct: 249 YVPYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASK 299


>gi|46143530|ref|ZP_00135019.2| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
          Length = 606

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC   C +C F  N+  + Y K+  +  I+    E   +RQ +G   I +++FG
Sbjct: 56  AYVHIPFCAGHCIFCGFYRNAWKQEYSKIYTDKLIKELAYEAS-IRQGSG--KIKAVYFG 112

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+
Sbjct: 113 GGTPTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGI 172

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A + 
Sbjct: 173 QTFNSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTL 232

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 233 PLSGLDIY 240


>gi|255690142|ref|ZP_05413817.1| coproporphyrinogen III oxidase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260624426|gb|EEX47297.1| coproporphyrinogen III oxidase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 425

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 169/407 (41%), Gaps = 50/407 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---- 59
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LVPYLKQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q +  LT   +  S   GGGTP L+    +  +LD         S+   ++E +P   + 
Sbjct: 83  QQLSPLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAVLFGVYPSHTFTSVETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLI 176
                 ++AGV R+S+GVQS  ++ L  L R       ++A+ AI   +  FP  + DLI
Sbjct: 143 ARLDLLKQAGVARVSIGVQSFLDEELTALKRRPRRDMINQALEAIR--KRQFPFFNIDLI 200

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y +  QT+  +   L++AL +  + L +Y L +  GT   +   D D+       A DL 
Sbjct: 201 YGIKGQTVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERESD-DVCFQMYCAACDLL 259

Query: 237 NLTQSITSA------HGLHAYEISNHSFL-------GAESLHNLNYWRYGDYIGIGPGAH 283
                + ++      H     EIS    +       G   L NL+Y              
Sbjct: 260 KDRGFLQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYA------------- 306

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +R  V    +A  I+ +  +    V +NG        LS E++   F++  L    G+  
Sbjct: 307 TRYTVCQRCIAGEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDK 360

Query: 344 KDWEMLAGRNLD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++E   G + D +   R L  + +IE     R+  T  GM   D +
Sbjct: 361 AEYERRFGESPDNVMLFRQLAERQWIENTDNGRICLTSDGMAYSDYI 407


>gi|215488780|ref|YP_002331211.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312968176|ref|ZP_07782386.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|215266852|emb|CAS11293.1| putative coproporphyrinogen oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312287001|gb|EFR14911.1| radical SAM superfamily protein [Escherichia coli 2362-75]
          Length = 445

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|197248816|ref|YP_002148930.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197212519|gb|ACH49916.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 413

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 165/384 (42%), Gaps = 44/384 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQ 365
            +G+       L  ++    F++  L   +G+S+ D++      A R+   + ER +Q Q
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFP-DLERFIQ-Q 373

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G+  +   SRLR T+ GM + D +
Sbjct: 374 GYCYQNS-SRLRLTETGMALSDCL 396


>gi|331001738|ref|ZP_08325260.1| hypothetical protein HMPREF0491_00122 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412712|gb|EGG92095.1| hypothetical protein HMPREF0491_00122 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 417

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 106/194 (54%), Gaps = 14/194 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
            G+YVH PFC   C +C +   +   K     +I + + E+  + +Q  G R  +S++FG
Sbjct: 37  FGLYVHIPFCKSICNFCPYCKVIYDEKTANV-YIDALIKEIHLVGKQWNGRRKATSLYFG 95

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+  + I  I+  +++++ ++    I IE +P +V +   +  +KAGV++IS+G+
Sbjct: 96  GGTPALLADR-ITDIIAALSEHFIITDG--IGIELHPDNVNIPVLKTLKKAGVDKISIGI 152

Query: 138 QSLEEQSLRFLGRN----HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           QS +++  + L R      + S A+  +      F  +S D I+ALP QT    + ++  
Sbjct: 153 QSFQDKYQKVLQRRKFDIKDMSNALNEVE-----FETVSMDFIFALPTQTFEDLKNDIDM 207

Query: 194 ALSYAVDHLSLYQL 207
           A +   +H+++Y L
Sbjct: 208 AFANGANHIAIYPL 221


>gi|207109979|ref|ZP_03244141.1| coproporphyrinogen III oxidase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 139

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLRHALSQTD-EPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIHHHANLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNH 152
            E  L FL R H
Sbjct: 121 REDKLLFLERQH 132


>gi|313667780|ref|YP_004048064.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica ST-640]
 gi|313005242|emb|CBN86675.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica 020-06]
          Length = 470

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A  +      +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 48  EYLEALHSRGADASNKPLSLYIHIPFCNTICYYCGCNKIITKDKGRADAYIEYLEKEMKL 107

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + + I K + +  + E +IE +P  V   
Sbjct: 108 LAPHLGGRHQLAQLHFGGGTPTFLSDNQLERVFEMIRKYFQLIPDGEYSIEIDPRKVSRE 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 168 TVLKLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT    +  +   LS   D L+LY
Sbjct: 228 PYQTSESIKTTIDTVLSLDPDRLALY 253


>gi|318607457|emb|CBY28955.1| radical SAM family protein HutW, similar to coproporphyrinogen III
           oxidase, oxygen-independent,associated with heme uptake
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 437

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 11/269 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +       +    L E  M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQTD-STARYTDYLLRELSMEASSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + KN  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHSIISQLRKNLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPKQTMTQWEMELQRA 194
           +   +  + +GR  +  E   AIH   N+  R    +  DL++ LP QT   W+ +L   
Sbjct: 175 TFNTRIRQRMGRKASRDE---AIHFLTNLASRDRAAVVCDLMFGLPHQTPETWQEDLAIV 231

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S
Sbjct: 232 RQLPLDGVDLYALNLLPTTPLAKSVENNRIELPTLAQQCDFYCSGAENLAQAGWHQLSNS 291

Query: 255 NHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
           + +    E +L+NL   +  D + +G GA
Sbjct: 292 HWAHTTRERNLYNLLIKQGADCLALGSGA 320


>gi|59711833|ref|YP_204609.1| coproporphyrinogen III oxidase [Vibrio fischeri ES114]
 gi|59479934|gb|AAW85721.1| coproporphyrinogen oxidase, anaerobic [Vibrio fischeri ES114]
          Length = 458

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 4/220 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           T Q S    +YVH PFC  +C YC+F  H    ++ QE F  + L E++W  QL  T   
Sbjct: 58  TTQLSKHRCLYVHIPFCRVRCTYCNFFQHASSKQLVQEYF-DALLVELKWKAQLAWTQAA 116

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ +    I  +   I   + ++ + EIT+E   +  +   F    + G
Sbjct: 117 PFHAVYIGGGTPTDLTADQIEQLGKAIRSQFPLTPDCEITLEGRINRFDEEMFDKSLEGG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   +  R   R  +    +  I  L+ +    +  DL+Y LP QT   W+
Sbjct: 177 FNRFSFGVQSFNTKVRRSAKRLDDKEYVLRRIQELSDSEQAPIVVDLLYGLPYQTSEIWQ 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            +L   L      + LYQL    GT    +   G L  P+
Sbjct: 237 QDLNDFLETNAHGVDLYQLIEMGGTPMKGVIDKGKLPQPA 276


>gi|83645082|ref|YP_433517.1| coproporphyrinogen III oxidase [Hahella chejuensis KCTC 2396]
 gi|83633125|gb|ABC29092.1| oxygen-independent coproporphyrinogen III oxidase [Hahella
           chejuensis KCTC 2396]
          Length = 458

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 6/248 (2%)

Query: 5   SAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + +E     + +N SL +Y+H PFC + C YC  N  + + +     ++ +   E+    
Sbjct: 38  AVHEAAAASRATNRSLSLYLHIPFCARLCYYCACNKIITKRREKAIPYLNALYREIALQS 97

Query: 64  QLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVN 120
           +L G  R +  + +GGGTP+ + PQ +  +++ +  ++    N   + +IE +P   +  
Sbjct: 98  ELFGADRLVEQLHWGGGTPTFLAPQQMRDLMNELRTHFRFMDNDQGDYSIEIDPREADDE 157

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NRISLGVQ       + + R  +    +  +H AR + F  ++ DLIY L
Sbjct: 158 TLTTLREIGFNRISLGVQDFNPAVQKAVNRIQSEELTLGVLHKARELGFRSINIDLIYGL 217

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           P QT   +   +   + +A D LS++    + +  +  +  +D DL  P + + +   ++
Sbjct: 218 PLQTPDSFRKTVDTIIDFAPDRLSVFNYAHMPQRFMPQRRIRDEDLPRPEDKLTILQQSV 277

Query: 239 TQSITSAH 246
            Q I + +
Sbjct: 278 DQLIAADY 285


>gi|194333441|ref|YP_002015301.1| coproporphyrinogen III oxidase [Prosthecochloris aestuarii DSM 271]
 gi|194311259|gb|ACF45654.1| oxygen-independent coproporphyrinogen III oxidase [Prosthecochloris
           aestuarii DSM 271]
          Length = 475

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTG 67
           N+ TG     + +Y+H P+C   C +C  N+H  +    +E ++Q+ L E Q ++    G
Sbjct: 47  NDTTG-----VSMYIHIPYCENYCYFCGCNAHRTQDHSYEEPYLQALLKEWQMYLDVFPG 101

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             ++  +  GGGTP+   P+N+  +++G+ ++         + E NP S    + +    
Sbjct: 102 TLNVKEMHIGGGTPTFFSPENLIRLVNGLYEHVNRVDGYMFSFETNPRSTTKEHLEALYS 161

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+S G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+  
Sbjct: 162 VGFRRMSFGIQDFDPVVQKEINRMQSFELVKEKVDLAREIGFTSINFDLVYGLPKQTLAT 221

Query: 187 WEMELQRALSYAVDHLSLY 205
               + + +    D L+ Y
Sbjct: 222 ITDTIAKVMELRPDRLAFY 240


>gi|237730471|ref|ZP_04560952.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
 gi|226906010|gb|EEH91928.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
          Length = 445

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 7/271 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL---TEMQWMRQLTGPRSISSIFFG 77
           VY+H PFC   C +C F  +  R++        + L    EM+    L     I +++FG
Sbjct: 60  VYLHIPFCATHCTFCGF--YQNRFEEDNCALYTNALLREIEMEADSALHQSAPIHAVYFG 117

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +  Q++A I+  +     ++ + EITIE    + +         AG NR S+G+
Sbjct: 118 GGTPSALSAQDLARIITALRDKLPLAPDCEITIEGRVLNFDDARIDACLDAGANRFSIGI 177

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   +  + + R  +   A A +  L +     +  DL++ LP Q    W  +L  A  
Sbjct: 178 QSFNSRIRKKMARTSDGPTATAFMQGLVKRDRAAVVCDLLFGLPGQDAKLWGEDLAIARD 237

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +D + LY L +   T   K  + G   +PS     DLY        + G      S+ 
Sbjct: 238 IGLDGVDLYALNLIPNTPLGKAVETGRTTVPSPAERRDLYLQGCDFMDSAGWRCISNSHW 297

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRV 286
           +    E +L+NL   +  D +  G GA   V
Sbjct: 298 ARTTRERNLYNLLIKQGADCLAFGSGAGGSV 328


>gi|15613715|ref|NP_242018.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
 gi|10173768|dbj|BAB04871.1| BH1152 [Bacillus halodurans C-125]
          Length = 498

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 146/299 (48%), Gaps = 28/299 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + VY+  PFC  KC YC F ++    K G    +++FL  + +  + TG         ++
Sbjct: 170 VSVYIGIPFCPTKCAYCTFPAYAINGKNGS---VEAFLAGLHYEIEATGKWLTDHQIPVT 226

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGV 130
           +++FGGGTP+ I  + +  + + +  ++   + V E+T+EA  P ++     +  +K  V
Sbjct: 227 TVYFGGGTPTSITAEQMDALYETLYDSFPAMNQVRELTVEAGRPDTITPEKIEVLKKWNV 286

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H+  E I    +AR++    ++ DLI  LP +   +   
Sbjct: 287 DRISINPQSFENETLQAIGRHHSVEETIEKYKMARDLGMENINMDLIIGLPGEGPKEMAR 346

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+       + L+++ L+ ++ +   K ++D   V   + +A ++  +T S T  H   
Sbjct: 347 SLEETEKLMPESLTVHTLSFKRASTMTK-NRDKYKVATRDEIA-EMMAMTSSWTEDHEYA 404

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR-VKVGSHRVA 294
            Y            E   ++    ESL+N+         IG+G GA S+ V+ G+  ++
Sbjct: 405 PYYLYRQKNILGNLENVGYALPEKESLYNIVIMEEVQTIIGLGCGATSKWVEPGTGNIS 463


>gi|163867824|ref|YP_001609028.1| hypothetical protein Btr_0590 [Bartonella tribocorum CIP 105476]
 gi|161017475|emb|CAK01033.1| hypothetical protein BT_0590 [Bartonella tribocorum CIP 105476]
          Length = 259

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 6/183 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSI 71
           + ++ +Y+H PFC   C +C F     +Y    E+++ +  TE++    ++R L GP  I
Sbjct: 50  ARTISLYLHIPFCETICSFCPFQKGAYKYIKQIESYMSALTTEIRNKGNFIRSLKGP--I 107

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SI+ GGGTPSL+   NI  I   +   + +SS  E T+E+ P SV  +     R+ GVN
Sbjct: 108 RSIYIGGGTPSLLSADNIRHIGKVLYAEFELSSLAEFTLESEPKSVTRDKLYAAREIGVN 167

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           RIS GVQS  E+            +    +  ++ I   + FDL+Y    Q   +   +L
Sbjct: 168 RISFGVQSFIERFRSLFNLTSTREQIKNTVDWSQEIIGHVGFDLLYGTHSQQAEELLYDL 227

Query: 192 QRA 194
           ++A
Sbjct: 228 KQA 230


>gi|253584061|ref|ZP_04861259.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251834633|gb|EES63196.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 422

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 152/336 (45%), Gaps = 21/336 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSI-SSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ Q    E  ++ R     + I   IFFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYLADEFDKYGRTEYFKKGIFDVIFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +PQ + +IL+ I +N  ++ N E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPQQLEIILESIKRNVVLAENYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E   +F  R +   E I  +   +  F   +  D+IY  P QT+ +   + +    
Sbjct: 168 QTFSEAGRKFYNRTYGKEETIEKLKKLKEFFKGDVCVDIIYNFPNQTINEVLEDARIVKK 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVD--LY-NLTQSITSAHGLHAY 251
             +   S Y L + +G+   K+ KD   + V   E++  D  LY +    +   +  H  
Sbjct: 228 LEISSASFYSLMVHEGS---KLSKDIEAEKVKMEEDMKKDYLLYQHFVDEMLRGNQYHIL 284

Query: 252 EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVK-VGSHRVAISIE------KHPES 303
           E++  +  G +    +      GD   IG GA   V  +G +R++  +       ++ E 
Sbjct: 285 ELTKIARNGGDDYKYIKVRNTGGDTFPIGVGAGGSVHGIGVYRMSKEMSFYSQQTEYHER 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
           + K+       V+ KE L    + +E      R++E
Sbjct: 345 FSKLSGIMQFPVISKEALKDILKEEELKFFRERMKE 380


>gi|218691787|ref|YP_002399999.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|218429351|emb|CAR10315.2| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli ED1a]
          Length = 445

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|320193986|gb|EFW68619.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327]
          Length = 419

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGA 298


>gi|193214601|ref|YP_001995800.1| coproporphyrinogen III oxidase [Chloroherpeton thalassium ATCC
           35110]
 gi|193088078|gb|ACF13353.1| oxygen-independent coproporphyrinogen III oxidase [Chloroherpeton
           thalassium ATCC 35110]
          Length = 468

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           S  + +YVH P+C  KC +C  NS +      +E ++ + L E   +   L  P  I  I
Sbjct: 54  SKGISLYVHIPYCDSKCYFCGCNSVITTNHDVEEPYVNALLAEWDMYCDMLPEPPKIKEI 113

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+    +N   +LD I     ++   E + E NP +      Q +   G  R+S
Sbjct: 114 HIGGGTPTFFSIENHTRLLDRIFAKANIAEGTEFSFEGNPKNTSREQLQQFYDLGFRRMS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R       +  + +AR I +  ++ DL+Y LPKQT+   +  +++
Sbjct: 174 FGIQDFDASVQKLINRVQPHEMVVDVMSIAREIGYNSINLDLVYGLPKQTLETVKGTVEK 233

Query: 194 ALSYAVDHLSLY 205
             +   D L+ Y
Sbjct: 234 VKALRPDRLAFY 245


>gi|168821651|ref|ZP_02833651.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205341842|gb|EDZ28606.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320088417|emb|CBY98176.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductases [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 413

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 165/384 (42%), Gaps = 44/384 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQ 365
            +G+       L  ++    F++  L   +G+S+ D++      A R+   + ER +Q Q
Sbjct: 322 HHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFP-DLERFIQ-Q 373

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G+  +   SRLR T+ GM + D +
Sbjct: 374 GYCYQ-NGSRLRLTETGMALSDCL 396


>gi|300940154|ref|ZP_07154761.1| radical SAM domain protein [Escherichia coli MS 21-1]
 gi|300455015|gb|EFK18508.1| radical SAM domain protein [Escherichia coli MS 21-1]
          Length = 445

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|294794001|ref|ZP_06759138.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
 gi|294455571|gb|EFG23943.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
          Length = 475

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 135/293 (46%), Gaps = 23/293 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ M+ +     
Sbjct: 145 LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLRALTRDIEDMKAIIESYN 204

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
            ++ +++ GGGTP+++  ++   +L  ++    V    E T+EA  P SV     +   +
Sbjct: 205 LTVDTLYMGGGTPTVLADEDFYQVLKQLS--LLVPEGHEFTVEAGRPDSVNPTKLRSMLE 262

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            GVNRIS+  Q++++  LR +GR H+  +    +   + N    ++ D I  LP QTM  
Sbjct: 263 LGVNRISINPQTMQDDILRRIGRGHSVRDVDELLQYVKNNTSLSVNMDFIAGLPNQTMPN 322

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L +++G+  Y +H + D  +P E++  ++    +    A 
Sbjct: 323 MIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDD--IPEEHLVAEMVQYGKERLEAA 380

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           G   Y +    ++  + L N+ Y   G                + +GPG+ S+
Sbjct: 381 GYLPYYLYRQQYMRGQ-LENIGYTLPGKACEYNIQIMEERQSILSMGPGSSSK 432


>gi|225024662|ref|ZP_03713854.1| hypothetical protein EIKCOROL_01544 [Eikenella corrodens ATCC
           23834]
 gi|224942551|gb|EEG23760.1| hypothetical protein EIKCOROL_01544 [Eikenella corrodens ATCC
           23834]
          Length = 461

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 6/205 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+ A +N   G     L +Y+H PFC   C YC  N  + +     + ++     E    
Sbjct: 44  YIQAVQNRTPG----PLSLYIHIPFCNTICYYCGCNKIITKDTTRADQYLGYLKKEFALQ 99

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +L  G   ++ + FGGGTP+ +    +  +   I +++T+    E +IE +P  V    
Sbjct: 100 AELLQGKPELAQLHFGGGTPTFLSDAQLNFVFSLIREHFTLMPQGEYSIEIDPRKVSRET 159

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                  G NR+S+G+Q  ++Q  + + R  +  E    I  AR   F  +S DLIY LP
Sbjct: 160 VLFLGSLGFNRMSVGIQDFDQQVQQAVNRIQSEEETRVVIDAAREAGFQSVSVDLIYGLP 219

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT    +  L + L+ A D L++Y
Sbjct: 220 HQTPATMQQTLDKVLALAPDRLAVY 244


>gi|207859203|ref|YP_002245854.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206711006|emb|CAR35374.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 413

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+       L  ++    F++  L   +G+S+ D++     +   D        RQG+
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQGY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|254362721|ref|ZP_04978805.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica PHL213]
 gi|153094346|gb|EDN75201.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica PHL213]
          Length = 581

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGG 79
            Y H PFC   C +C F  +  +    Q  +    ++E+++   L  G   I +++FGGG
Sbjct: 32  AYFHIPFCASHCIFCGFYRNAWKENYSQI-YTDRVISELRYESSLWRGQGKIHAVYFGGG 90

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +++  ++    +   ++ + E TIE   S  +++  +   +AGVNRIS+G+Q+
Sbjct: 91  TPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKACIEAGVNRISIGIQT 150

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              +  + LGR H+  EA   +     +   +  DLI+ LP QT   W+ +++ A S  +
Sbjct: 151 FNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQTDDIWQNDIEIATSLPI 210

Query: 200 DHLSLY 205
             L +Y
Sbjct: 211 SGLDIY 216


>gi|16767277|ref|NP_462892.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167995118|ref|ZP_02576208.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|16422574|gb|AAL22851.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327141|gb|EDZ13905.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261249128|emb|CBG26989.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996297|gb|ACY91182.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160518|emb|CBW20048.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915124|dbj|BAJ39098.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225295|gb|EFX50353.1| Coproporphyrinogen dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323132352|gb|ADX19782.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332990840|gb|AEF09823.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 413

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+       L  ++    F++  L   +G+S+ D++     +   D        RQG+
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQGY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|288941687|ref|YP_003443927.1| coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
 gi|288897059|gb|ADC62895.1| Coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
          Length = 491

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 14/204 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSIS 72
             +Y+H PFC ++C +C +   V+  K G       E ++ +   EM   R   G +   
Sbjct: 74  FDIYLHLPFCEQRCLFCHYP--VKFGKFGDKTHDETERYLDALEREMDLFRNRLGIQKFQ 131

Query: 73  --SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYR 126
             SI  GGGTP+L+ P  +  +L G  +    S   +   + +P ++         +  R
Sbjct: 132 ARSILVGGGTPTLLTPAQLDRMLTGFKERVDCSRVTQFNFDVDPGTLTDQHGAERRRILR 191

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           + GV+R+++GVQSL+++ LR + R H+   A+A+I   R    +++ + I+  P QT+  
Sbjct: 192 EHGVDRLTIGVQSLDDEILRKMHRPHDVKTALASIEACRADGFQLNIEFIFGYPGQTLEG 251

Query: 187 WEMELQRALSYAVDHLSLYQLTIE 210
           W   +  A    V+ + LY+L I+
Sbjct: 252 WMRMIDEAARLDVEEIQLYRLKID 275


>gi|294670498|ref|ZP_06735378.1| hypothetical protein NEIELOOT_02217 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307777|gb|EFE49020.1| hypothetical protein NEIELOOT_02217 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 468

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   E    G  +  L +Y+H PFC   C YC  N  + + K   + ++     EM  
Sbjct: 46  EYIRTLELRQAGALNKPLSLYIHIPFCDTICYYCGCNKIITKDKTRADEYLNYLEREMDL 105

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G + ++ + FGGGTP+ +    +  +   I +++ +  + E +IE +P  V   
Sbjct: 106 LAPHLNGKQPLAQLHFGGGTPTFLSDGQLDRVFAMIHRHFNLLPDGEYSIEIDPRKVSRE 165

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +  + + R     E    I  AR   F  +S DLIY L
Sbjct: 166 TVLHLGKLGFNRMSVGIQDFDPKVQQAVNRIQTVEETRTVIEAAREAGFKSVSVDLIYGL 225

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P Q++   +  +   L    D L+LY
Sbjct: 226 PHQSLESIKPTIDTVLGLDPDRLALY 251


>gi|256390375|ref|YP_003111939.1| coproporphyrinogen III oxidase [Catenulispora acidiphila DSM 44928]
 gi|256356601|gb|ACU70098.1| Coproporphyrinogen dehydrogenase [Catenulispora acidiphila DSM
           44928]
          Length = 445

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 170/406 (41%), Gaps = 42/406 (10%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           G+G ++L  Y H PFC  +C +C+  +         E+   ++L  ++  RQ    R+  
Sbjct: 34  GEGRDALSFYTHIPFCEVRCGFCNLFTRTG----APESLTTAYLDALE--RQAIAVRAAL 87

Query: 71  --------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNN 121
                    ++   GGGTP+ + P  ++ + D   K   V    + +++EA+P++   + 
Sbjct: 88  DESGPAPRFANAAIGGGTPTYLSPDELSRLFDIAEKVVGVGLGAIPLSVEASPATATPDR 147

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                + G  R+SLGVQS ++   R   R   A++  AA+   R    P ++ DLIY + 
Sbjct: 148 LTVLAERGTTRLSLGVQSFDDVEARSAVRPQKAADVFAALDAVRAADIPVLNVDLIYGIE 207

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   W   LQ AL +  + + LY L +   T   +++ + D    ++   +DLY   +
Sbjct: 208 GQTRESWRASLQTALRWMPEEIYLYPLYVRPLTGLGRLNLNHDAEWDAQR--LDLYRCGR 265

Query: 241 SITSAHGLHAYEISNHSFLGAESLH-NLNYWRYGD-YIGIGPGAHSRVKV--GSHRVAIS 296
                +G     +     L A  +    +Y    D  IG+G GA S       S   A+S
Sbjct: 266 DFLLENGYEQVSMRMFRRLDAPVVEGGEDYACQTDGMIGLGCGARSYTASLHYSFDYAVS 325

Query: 297 IEKHPESWLKMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +      + V     + VE  + L +++QA  FL+  L   +G+   D        L 
Sbjct: 326 ASEVRGIIDEYVATTDFSRVEVGYRLDADEQARRFLIQSLLQADGMERGDAVERFSAELA 385

Query: 356 IECERNLQRQGFIERV------------QFSRLRCTQRGMTMLDSV 389
           +     L  +GF+E V               RLR T  G+   D+V
Sbjct: 386 L-----LNDRGFLESVSDRASASASASGADGRLRLTPEGLAWSDAV 426


>gi|295702734|ref|YP_003595809.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium DSM 319]
 gi|294800393|gb|ADF37459.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium DSM 319]
          Length = 499

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 143/293 (48%), Gaps = 29/293 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQL-----TGPR 69
            N + +Y+  PFC  KC YC F ++      G++  + SFL  + + MR++         
Sbjct: 171 KNEVSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVTSFLGGLHYEMREVGKWLKDNNV 227

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRK 127
            I+++++GGGTP+ I  + + ++ + + +++    N+ EIT+EA  P ++         K
Sbjct: 228 KITTVYYGGGTPTSITAEEMDMLYEEMYESFPDVQNIREITVEAGRPDTITEEKLAVLNK 287

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + +
Sbjct: 288 WNIDRISVNPQSYIQETLKAIGRHHTVEETIDKFHLSRKMGMNNINMDLIIGLPNEGVEE 347

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSA 245
           ++  L  +     + L+++ L+ ++ +   +M ++      ++   +  + +L    T  
Sbjct: 348 FQHTLDESKKLLPESLTVHTLSFKRAS---EMTQNKRKYKVADRYEIGKMMDLATEWTQE 404

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR 285
            G   Y            E   +SF G ESL+N+         IG+G GA S+
Sbjct: 405 QGYEPYYLYRQKNILGNLENVGYSFPGQESLYNIMIMEEKQTIIGLGCGASSK 457


>gi|294497361|ref|YP_003561061.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium QM B1551]
 gi|294347298|gb|ADE67627.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium QM B1551]
          Length = 499

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 143/293 (48%), Gaps = 29/293 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQL-----TGPR 69
            N + +Y+  PFC  KC YC F ++      G++  + SFL  + + MR++         
Sbjct: 171 KNEVSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVTSFLGGLHYEMREVGKWLKDNNV 227

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRK 127
            I+++++GGGTP+ I  + + ++ + + +++    N+ EIT+EA  P ++         K
Sbjct: 228 KITTVYYGGGTPTSITAEEMDMLYEEMYESFPDVQNIREITVEAGRPDTITEEKLAVLNK 287

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + +
Sbjct: 288 WNIDRISVNPQSYIQETLKAIGRHHTVEETIDKFHLSRKMGMNNINMDLIIGLPNEGVEE 347

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSA 245
           ++  L  +     + L+++ L+ ++ +   +M ++      ++   +  + +L    T  
Sbjct: 348 FQHTLDESKKLLPESLTVHTLSFKRAS---EMTQNKRKYKVADRYEIGKMMDLATEWTQE 404

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR 285
            G   Y            E   +SF G ESL+N+         IG+G GA S+
Sbjct: 405 QGYEPYYLYRQKNILGNLENVGYSFPGQESLYNIMIMEEKQTIIGLGCGASSK 457


>gi|237743363|ref|ZP_04573844.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229433142|gb|EEO43354.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 469

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 107/204 (52%), Gaps = 5/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E++ +     T  + +SSI
Sbjct: 146 INLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVETLLREIKIIGDFLKTYNKKVSSI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +   +  +K  V+R+
Sbjct: 206 YFGGGTPSTLTEDDLERVLRKLLENIDMSDVKEFTFEAGREDSLNIKKLEIMKKYSVDRM 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LP++T  +    L++
Sbjct: 266 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLGFIINMDLIIGLPEETTEEILNTLRQ 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
              Y +D+L+++ L  ++ +  +K
Sbjct: 326 LKDYDIDNLTIHCLAFKRASKLFK 349


>gi|291522834|emb|CBK81127.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Coprococcus catus GD/7]
          Length = 484

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 105/203 (51%), Gaps = 3/203 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            ++  +YV  PFC   C YC F+S+ +  ++   ++++ +   E++    + G + + + 
Sbjct: 156 DHTFSLYVGIPFCPSICAYCSFSSYPLSVWEKQVDSYLDALCKEIEAASTMMGNKKLLTF 215

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  + + + ++   E T+EA  P S+  +  +  RK  ++RI
Sbjct: 216 YMGGGTPTSLSAAQMDRLLTCLEQYFDLAHVSEKTVEAGRPDSITEDKLKVLRKHHIDRI 275

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   E   A H+AR   F  ++ DLI  LP +T    +  + 
Sbjct: 276 SINPQTMNQETLDLIGRRHTTEEVKQAFHMAREAGFMNINMDLIAGLPGETSEHMQRTMD 335

Query: 193 RALSYAVDHLSLYQLTIEKGTLF 215
             +  A D ++++ L +++    
Sbjct: 336 AIVDLAPDSVTVHSLALKRAAFL 358


>gi|288918579|ref|ZP_06412928.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
 gi|288349979|gb|EFC84207.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
          Length = 438

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 20/241 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------G 67
           Q  ++L +Y+H P C  +C +C+  +         E F  ++L  ++  RQ        G
Sbjct: 41  QDRSALFLYLHVPLCEMRCGFCNLFTRT----GASEEFTGAYLDALE--RQAVAVTGALG 94

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             + +++ FGGGTP+ +    +  + D I+        +   +E +P++   +     R+
Sbjct: 95  DAAFATVAFGGGTPTYLTAPELERLCD-ISARLAPLGGIPFGVETSPATATADRLTVLRE 153

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQ 186
            G  RIS+GVQS  +   R  GR    +E  AA+  + R  FP ++ DLIY +  QT T 
Sbjct: 154 RGTTRISIGVQSFLDVEARAAGRPQRRAEVEAALERIRRAGFPTLNIDLIYGIDGQTATT 213

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL++  + L LY L I   T   +   D D      +    LY L +    AH
Sbjct: 214 WLHSLDAALAWRPEELYLYPLYIRPLTGLARRETDWD------DQRTRLYGLGRDHLLAH 267

Query: 247 G 247
           G
Sbjct: 268 G 268


>gi|312115233|ref|YP_004012829.1| coproporphyrinogen dehydrogenase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220362|gb|ADP71730.1| Coproporphyrinogen dehydrogenase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 451

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFGG 78
           VY++ P+C  +C +C F  +V R ++  + ++   + EM+ M    L     I S++ GG
Sbjct: 61  VYINVPYCQSRCLFCGFFQNVWRPEL-SDAYVNDVVAEMEEMAATPLVSTAPIESVYLGG 119

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    +A ++  + +   +    EIT+E       +        AG NR+SLGVQ
Sbjct: 120 GTPSALLSAPLARLIANVRRLLPLDPECEITVEGRAYGFGLEKAVAAFDAGANRVSLGVQ 179

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +    R LGR  + +  +A ++ LA      +  DL+Y LP QT   W  +++   S 
Sbjct: 180 TFDTAVRRRLGRKLDGAATLAFLNDLAALDRASIVCDLMYGLPGQTREIWRRDIETVASS 239

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA--VDLYNLTQSITSAHGLHAYEISN 255
            +D ++LY L I +G    K   D  L  P+  V     +Y        A G    ++S 
Sbjct: 240 RIDGVTLYALNIFRGGPLAKSIADEKLP-PAALVGEQAQMYVEAAEFLVAEGFR--QVSQ 296

Query: 256 HSFLGAESLHNLNYWRYGDYIGI-----GPGA 282
             F  A   H  N +  G   G+     GPGA
Sbjct: 297 SHF--ARGDHERNRYNSGIKRGVPCIPFGPGA 326


>gi|282850507|ref|ZP_06259886.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282580000|gb|EFB85404.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 475

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 136/293 (46%), Gaps = 23/293 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ M+ +     
Sbjct: 145 LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLKALTRDIEDMKAIVQSYN 204

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
            ++++++ GGGTP++++ ++   +L  ++    V    E T+EA  P SV     +    
Sbjct: 205 LTVNTLYMGGGTPTVLKDEDFHQVLKQLS--LLVPEGHEFTVEAGRPDSVNPTKLRSMLA 262

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            GVNRIS+  Q++++  LR +GR H+  +    +   + N    ++ D I  LP QTM  
Sbjct: 263 LGVNRISINPQTMQDDILRRIGRGHSVRDIDELLQYVKNNTSLAVNMDFIAGLPNQTMLN 322

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L +++G+  Y +H + D  +P E++  ++    +    A 
Sbjct: 323 MIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDD--IPEEHLVAEMVQYGKERLEAA 380

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           G   Y +    ++  + L N+ Y   G                + +GPG+ S+
Sbjct: 381 GYVPYYLYRQQYMRGQ-LENIGYTLPGKACEYNIQIMEERQSILSMGPGSSSK 432


>gi|227112305|ref|ZP_03825961.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 437

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 5/284 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLR-DDSTATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +  L       +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWHEDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A+D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 ALDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               E +L+NL   +  D + +G GA   +   ++ +  S+E++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYMMERSLERY 338


>gi|261494665|ref|ZP_05991145.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309630|gb|EEY10853.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 605

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGG 79
            Y H PFC   C +C F  +  +    Q  +    ++E+++   L  G   I +++FGGG
Sbjct: 56  AYFHIPFCASHCIFCGFYRNAWKENYSQI-YTDRVISELRYESSLWRGQGKIHAVYFGGG 114

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +++  ++    +   ++ + E TIE   S  +++  +   +AGVNRIS+G+Q+
Sbjct: 115 TPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKACIEAGVNRISIGIQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              +  + LGR H+  EA   +     +   +  DLI+ LP QT   W+ +++ A S  +
Sbjct: 175 FNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQTDDIWQNDIEIATSLPI 234

Query: 200 DHLSLY 205
             L +Y
Sbjct: 235 SGLDIY 240


>gi|261491863|ref|ZP_05988442.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261312518|gb|EEY13642.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 605

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 2/209 (0%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGG 79
            Y H PFC   C +C F  +  +    Q  +    ++E+++   L  G   I +++FGGG
Sbjct: 56  AYFHIPFCASHCIFCGFYRNAWKENYSQ-IYTDRVISELRYESSLWRGQGKIHAVYFGGG 114

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +++  ++    +   ++ + E TIE   S  +++  +   +AGVNRIS+G+Q+
Sbjct: 115 TPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKACIEAGVNRISIGIQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              +  + LGR H+  EA   +     +   +  DLI+ LP QT   W+ +++ A S  +
Sbjct: 175 FNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQTDDIWQNDIEIATSLPI 234

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             L +Y           ++ + G L  P+
Sbjct: 235 SGLDIYAFNNYPFLPINRLIEHGKLPAPA 263


>gi|160882833|ref|ZP_02063836.1| hypothetical protein BACOVA_00795 [Bacteroides ovatus ATCC 8483]
 gi|156111697|gb|EDO13442.1| hypothetical protein BACOVA_00795 [Bacteroides ovatus ATCC 8483]
          Length = 425

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 169/407 (41%), Gaps = 50/407 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---- 59
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LVPYLKQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q +  LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   + 
Sbjct: 83  QQLSPLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLI 176
                 ++AGV R+S+GVQS  ++ L  L R       ++A+ AI   +  FP  + DLI
Sbjct: 143 ARLDLLKQAGVARVSIGVQSFLDEELTALKRRPRRDMINQALEAIR--KRQFPFFNIDLI 200

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y +  QT+  +   L++AL +  + L +Y L +   T   +   D D+       A DL 
Sbjct: 201 YGIKGQTVASFLYSLEQALLFQPNELFIYPLYVRPETAITERESD-DVCFQMYCAACDLL 259

Query: 237 NLTQSITSA------HGLHAYEISNHSFL-------GAESLHNLNYWRYGDYIGIGPGAH 283
                + ++      H     EIS    +       G   L NL+Y              
Sbjct: 260 KDRGFLQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYA------------- 306

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +R  V    +A  I+ +  +    V +NG        LS E+Q   F++  L    G+  
Sbjct: 307 TRYTVCQRCIAGEIDDYMGTTDFTVARNGF------ILSQEEQRQRFIIKNLMYYMGLDK 360

Query: 344 KDWEMLAGRNLD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++E   G + D +   R L  + +IE     R+  T  GM   D +
Sbjct: 361 AEYERRFGESPDNVPLFRQLAERQWIEDTDNGRICLTSDGMAYSDYI 407


>gi|257469997|ref|ZP_05634089.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064223|ref|ZP_07928708.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689899|gb|EFS26734.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 422

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 21/291 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISS 73
           S    +YVH P+C K C +C+ N   ++     +++ Q    E     Q           
Sbjct: 46  SRKKAIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYIADEFDKYGQTNYFKKSEFEV 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTP++ +P  + +IL+ I KN T++ + E T E    ++     +   K GVNR+
Sbjct: 104 IFFGGGTPTVYKPHQLEIILESIKKNVTLAEDYEFTFETTLHNLTEEKLEVMMKYGVNRL 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+  ++   F  R +   E +  +   +  F   +  D+IY  P +T+ +   + +
Sbjct: 164 SVGIQTFSDRGRVFYNRTYGKEEVVERLKKLKAFFKGDVCVDIIYNFPDETLEEVIEDAR 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVD--LY-NLTQSITSAHG 247
                 +   S Y L +  G+   K+ KD   + V   E++  D  LY +    +     
Sbjct: 224 LVKELELSSASFYSLMVHDGS---KLSKDIEAEKVKLEEDMKKDYLLYQHFVDEMLREDK 280

Query: 248 LHAYEISNHSFLGAESLHNLNYWRY----GDYIGIGPGAHSRVK-VGSHRV 293
            H  E++    +      N  Y +     GD   IG GA   V  VG +R+
Sbjct: 281 YHVLELTK---IAKNDGDNYKYIKVRNTGGDTFPIGVGAGGSVNGVGVYRM 328


>gi|13474841|ref|NP_106411.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14025597|dbj|BAB52197.1| coproporphyrinogen III dehydrogenase [Mesorhizobium loti
           MAFF303099]
          Length = 439

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 5/183 (2%)

Query: 6   AYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           AY   + G  +N  + +Y+H PFC   C YC   + + +     +N++ +   E+  + +
Sbjct: 31  AYGEWLGGLSANDPVSLYIHIPFCRSMCWYCGCPTTITQRDPPNQNYVAALRGEIHLVSE 90

Query: 65  LTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           LT P++  +S + FGGGTP+L+EP     + + + + +       I +E +P +      
Sbjct: 91  LT-PQALPVSDVHFGGGTPTLLEPTEFLALTELLRRRFAFRQKTAIAVEIDPRTFTAEMA 149

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPK 181
           +    AGVNR SLGVQS +    + + R  +  +   A+ +L +    R++ DLIY LP 
Sbjct: 150 EALSAAGVNRASLGVQSFDPSVQKAINRIQSVEQTATAVENLRQQGINRINIDLIYGLPN 209

Query: 182 QTM 184
           QTM
Sbjct: 210 QTM 212


>gi|311105444|ref|YP_003978297.1| oxygen-independent coproporphyrinogen III oxidase 1 [Achromobacter
           xylosoxidans A8]
 gi|310760133|gb|ADP15582.1| oxygen-independent coproporphyrinogen III oxidase 1 [Achromobacter
           xylosoxidans A8]
          Length = 476

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 2/205 (0%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW- 61
           Y  A +       +  L +YVH PFC   C YC  N  V R+      ++ +   E++  
Sbjct: 55  YRQALQQRRAAAPAEPLSLYVHIPFCESVCYYCACNKVVTRHHGRAARYLDALAAEIELH 114

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +R+L     +S + FGGGTP+ +  + ++ ++  + + +   ++ EI+IE +P +     
Sbjct: 115 VRELGEGVPVSQLHFGGGTPTFLSDEELSGLMANLRRAFRFETDAEISIEVDPRTATPER 174

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S GVQ  + +    + R  +  +  A +  AR + +  ++ DLIY LP
Sbjct: 175 LAHMRELGFNRLSFGVQDFDPRVQAAVHRVQSFEDVRALMQSARALGYVSVNMDLIYGLP 234

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT   +   + + ++   D ++LY
Sbjct: 235 LQTTESFARTIAQVIALRPDRIALY 259


>gi|308051447|ref|YP_003915013.1| oxygen-independent coproporphyrinogen III oxidase [Ferrimonas
           balearica DSM 9799]
 gi|307633637|gb|ADN77939.1| oxygen-independent coproporphyrinogen III oxidase [Ferrimonas
           balearica DSM 9799]
          Length = 456

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 1/196 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           + G     L +Y+H PFC K C YC  N  + R+    + ++     E++    L    +
Sbjct: 44  IIGSDKRDLSLYIHVPFCHKLCYYCGCNKIITRHPHKADQYLDYLEREIKNRAPLFADYT 103

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ + +GGGTP+ +  + I  +   + +++  ++  E +IE +P  +E+      ++ G 
Sbjct: 104 VTQMHWGGGTPTFLNHEQIRRLTGLLKQHFNFANEGEFSIEIDPREIELETVDVLKEVGF 163

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+GVQ   +   + + R  +       +  AR   F   + DLIY LP QT   ++ 
Sbjct: 164 NRISVGVQDFNKDVQKAVNREQDEQFIFDLVKYAREQGFQSTNVDLIYGLPHQTPENFQE 223

Query: 190 ELQRALSYAVDHLSLY 205
            L+R  + + D LS++
Sbjct: 224 TLERIKALSPDRLSIF 239


>gi|316934726|ref|YP_004109708.1| Radical SAM domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315602440|gb|ADU44975.1| Radical SAM domain protein [Rhodopseudomonas palustris DX-1]
          Length = 451

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 6/213 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISS 73
           S S   Y+H P+C   C +C F  +V R + G   ++   + E+       L     I +
Sbjct: 57  SESAVAYLHVPYCQNHCLFCGFFENVWRPEAGPA-YVDDLIAELAAKSHTPLVSSAPIEA 115

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTPS ++  ++A ++  + +   +S++ EIT+E       +        AGVNR+
Sbjct: 116 VYIGGGTPSALDADDLARLIAALHRYLPLSADCEITLEGRSYGFGIERAAKLADAGVNRL 175

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
           S+GVQS      R LGR   A + +AA         R S   DLIY LP Q+   W  ++
Sbjct: 176 SIGVQSFSTDVRRRLGRKR-AGDEVAAFLSELMALGRTSVVCDLIYGLPGQSEADWRRDI 234

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                  +D ++LY L +  G    +  + G L
Sbjct: 235 DTVGRVGLDGVTLYALNMFPGGPMARAVEHGKL 267


>gi|332142094|ref|YP_004427832.1| coproporphyrinogen III oxidase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327552116|gb|AEA98834.1| coproporphyrinogen III oxidase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 458

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 2/229 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +T   + ++ +YVH PFC   C YC  N  V R+    ++++     E+   R L   + 
Sbjct: 46  LTVSKAKAVSLYVHIPFCKTLCYYCGCNKLVTRHNEKADDYLDYLEKEIVSKRYLADDKP 105

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+  GGG+PS +       ++  + K++T     E++IE +P +V+    Q  R  G 
Sbjct: 106 VVSLHLGGGSPSFLNKVQHTFLMYLLKKHFTFEVGAELSIELDPRNVDKTYLQNLRGLGY 165

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            RIS G+Q  +    + + R  + S     +  AR + F  ++ DLIY LP Q+   +  
Sbjct: 166 TRISFGLQDTDYNVQKTINRVQSTSHIADLVSEARTLGFESVNLDLIYGLPNQSEETFAS 225

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +    +   D +SL+         F    K     LPS      LYNL
Sbjct: 226 TIAATKAMMPDRISLFSYA-HLPERFAAQRKFAPGTLPSSEEKAALYNL 273


>gi|293370683|ref|ZP_06617233.1| coproporphyrinogen dehydrogenase [Bacteroides ovatus SD CMC 3f]
 gi|292634207|gb|EFF52746.1| coproporphyrinogen dehydrogenase [Bacteroides ovatus SD CMC 3f]
          Length = 414

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 170/407 (41%), Gaps = 50/407 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---- 59
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 19  LVPYLKQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 71

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q +  LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   + 
Sbjct: 72  QQLSPLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADP 131

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLI 176
                 ++AGV R+S+GVQS  ++ L  L R       ++A+ AI   +  FP  + DLI
Sbjct: 132 TRLDLLKQAGVARVSIGVQSFLDEELTALKRRPRRDMINQALEAIR--KRQFPFFNIDLI 189

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y +  QT+  +   L++AL +  + L +Y L +  GT   +   D D+       A DL 
Sbjct: 190 YGIRGQTVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERESD-DVCFQMYCAACDLL 248

Query: 237 NLTQSITSA------HGLHAYEISNHSFL-------GAESLHNLNYWRYGDYIGIGPGAH 283
                + ++      H     EIS    +       G   L NL+Y              
Sbjct: 249 KDRGFLQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYA------------- 295

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +R  V    +A  I+ +  +    V +NG        LS E++   F++  L    G+  
Sbjct: 296 TRYTVCQRCIAGEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDK 349

Query: 344 KDWEMLAGRNLD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +++   G + D +   R L  + +IE     R+  T  GM   D +
Sbjct: 350 AEYKRRFGESPDNVMLFRQLAERQWIENTDNGRICLTSDGMAYSDYI 396


>gi|306816147|ref|ZP_07450285.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|305850543|gb|EFM51000.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
          Length = 445

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++  I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLTRIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D +  G GA
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGA 324


>gi|126659866|ref|ZP_01730991.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
 gi|126618829|gb|EAZ89573.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
          Length = 465

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 2/195 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +  L +Y H PFC   C +C  N+ +   K   + +++  + +++   +L  P R+++ I
Sbjct: 54  NTPLSLYCHIPFCETACYFCGCNTIITGNKKVADPYLEYLIKDIERTAELISPNRAVNQI 113

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +    I  + + + KN+ +  + EI+IE NP  ++ N     RK G NRIS
Sbjct: 114 HWGGGTPNYLNQSQIDQLFNTLVKNFNIDKDAEISIEVNPRYLDRNFIFFLRKLGFNRIS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  + +  + + R          +   R   F  ++ DLIY LP Q    ++  +Q+
Sbjct: 174 FGIQDFDPKVQKVINRVQPEEMLFNVMGWMREAEFESVNVDLIYGLPYQNRNTFKKTVQK 233

Query: 194 ALSYAVDHLSLYQLT 208
            +    D ++++   
Sbjct: 234 TIELDPDRIAVFNFA 248


>gi|238752394|ref|ZP_04613872.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
 gi|238709435|gb|EEQ01675.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
          Length = 414

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  + +     +    L E  M+    L     I +I+FGG
Sbjct: 33  LYLHIPFCATHCTFCGFYQNPLQPE-STARYTDYLLQELNMEAASPLLQGGPIHAIYFGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  I+  + +N  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 92  GTPSALSAEQLHRIISQLRQNLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LAR     +  DL++ LP QT   W+ +L      
Sbjct: 152 TFNTRIRQRMGRKADRDQAIRFLTDLARRDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 212 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 271

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D + +G GA
Sbjct: 272 RTTRERNLYNLLIKQGADCLALGSGA 297


>gi|237715151|ref|ZP_04545632.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
 gi|262408898|ref|ZP_06085443.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294810689|ref|ZP_06769337.1| coproporphyrinogen dehydrogenase [Bacteroides xylanisolvens SD CC
           1b]
 gi|229444984|gb|EEO50775.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
 gi|262353109|gb|EEZ02204.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294442022|gb|EFG10841.1| coproporphyrinogen dehydrogenase [Bacteroides xylanisolvens SD CC
           1b]
          Length = 424

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 166/403 (41%), Gaps = 43/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LLPYLEQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 64  QLTGPRSISSIF----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q   P +   IF     GGGTP L+    +  +L+  A      S+   +IE +P   + 
Sbjct: 83  QQLSPLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 ++AGV RIS+G+QS   + L  L R         A+   R + FP  + DLIY 
Sbjct: 143 ARLTWLKQAGVARISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFPFFNIDLIYG 202

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +  QT+  +   L++AL +  + L +Y L + +GT   +   D        +V   +Y  
Sbjct: 203 IKGQTVDSFLYSLEQALLFQPNELFIYPLYVRQGTAITEREPD--------DVCFRMYCA 254

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA-----------HSRVK 287
            + +    G    + S   F+   S         GD + +  G+            +R  
Sbjct: 255 ARDLLKDRGF--LQTSMRRFIHHPSTD--AEISCGDEVMLSCGSGGRSYLGHLHYATRYT 310

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           V  H +A  I+ +  +    V +NG        LS E++   F++  L    G+   ++E
Sbjct: 311 VSQHCIAGEIDDYMGTADFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYE 364

Query: 348 MLAGRNL-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              G +  DI   R L  + +IE     R+  T  G+   D +
Sbjct: 365 RRFGESPDDIPLFRQLAERQWIESTD-DRICLTSEGIGYSDYI 406


>gi|319940966|ref|ZP_08015303.1| hypothetical protein HMPREF9464_00522 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805539|gb|EFW02334.1| hypothetical protein HMPREF9464_00522 [Sutterella wadsworthensis
           3_1_45B]
          Length = 531

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 5/198 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM-RQLTGPRSISSIFFGG 78
            Y+H PFC  +C YC F  +  + +   E + +  + E++ W  R       I++++FGG
Sbjct: 63  AYIHVPFCETRCLYCMFYQNPWKEEATTE-YAKQLVKELELWSDRAAQNAAPINALYFGG 121

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+   P +I L++  + K   ++++ EIT+E    +          ++GVNR SLGVQ
Sbjct: 122 GTPTAFSPDDIRLVMGAVKKYLPLANDCEITLEGRIHNFSDAKMDAAIESGVNRFSLGVQ 181

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   Q  + + R  +    I  +  L       +  D+IY  P QTM  WE +L+ A S 
Sbjct: 182 TFNTQIRQSVMRVDDRDTIIRRLDKLCSYNNASVVCDMIYGFPGQTMEVWEDDLKTAASL 241

Query: 198 AVDHLSLYQLTI-EKGTL 214
            +D +  YQL + EK  L
Sbjct: 242 HLDGVDCYQLNVFEKSPL 259


>gi|325103125|ref|YP_004272779.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
 gi|324971973|gb|ADY50957.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
          Length = 453

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/408 (21%), Positives = 182/408 (44%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K++++   + T     S + +Y+H PFC   C YC  N+ + +    +  +I + + E +
Sbjct: 35  KWINSVRESFTASNKESGISLYIHLPFCENLCTYCGCNTRITKNHSVEIPYINAVIREWE 94

Query: 61  WMRQLTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
             +     + I   +  GGGTP+    +N+ L+++GI  N  + SN E + EA+P++   
Sbjct: 95  LYKLNFDEKPIVKELHLGGGTPTFFSSENLNLLINGILTNCELHSNAEFSFEAHPANTTE 154

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
            + +   K G  R+SLG+Q  +++  + + R  +  +     + AR I +  +++DLIY 
Sbjct: 155 QHLETLYKLGFKRLSLGIQDFDKEVQKVINRMQSYEQVEYVTNTARKIGYTSINYDLIYG 214

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVD 234
           LP Q ++     + +      D ++ Y       I+ G   +      +L LP      +
Sbjct: 215 LPLQKLSGLIQTITQVNQLRPDRIAFYSYAHVPWIKPGQRMFT-----ELDLPDTEAKQE 269

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNL--NYWRYGDYIGIGPGAHSRVKVGSHR 292
           LY   + +    G     + +H  L ++SL N   N   + +++G     ++ + +G   
Sbjct: 270 LYETGRKLFIEAGYEEVGM-DHFALKSDSLFNAQENKTLHRNFMGYT-HQYTELMIGLGV 327

Query: 293 VAISIE--------KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +IS          K  E + +++ ++   V +   L SE       ++ +      +  
Sbjct: 328 SSISDTWNAFAQNVKTVEEYKQLIAEDTIPVFKGHLLDSEDLLMRKHILNIMCHGETTWN 387

Query: 345 DWEMLAGR-NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           D ++L    +L  +    + + G +E+  ++ L+ T+RG   L ++ A
Sbjct: 388 DIDLLNDSFSLAFDNLEEVVKDGLVEKHDYT-LKVTKRGTRFLRNICA 434


>gi|183220562|ref|YP_001838558.1| coproporphyrinogen III oxidase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910672|ref|YP_001962227.1| coproporphyrinogen III oxidase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775348|gb|ABZ93649.1| Coproporphyrinogen oxidase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778984|gb|ABZ97282.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase; Coprogen oxidase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 446

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 20/201 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSIS 72
           + L VY+H PFC   C +C  N+ + +    +E ++ +   E+    + +  L G + +S
Sbjct: 46  SKLAVYLHIPFCETLCTFCGCNTSITKNHTVEEPYVSAIQKELLLYIKNVPSLKG-KELS 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +  GGG+P+ +   N+   ++ I      S N + +IE +P    V+  +  R+ G +R
Sbjct: 105 ELHLGGGSPTYLSDYNLQSTIESILNQLAPSQNPQYSIEVDPRRTRVSQLKLLRQLGFHR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTM 184
           ISLGVQ  + +  R + R       I    L  NI        F  ++FDLIY LPKQ++
Sbjct: 165 ISLGVQDFDPEVQRLVNR-------IQPFELTENITLEARALGFDSVNFDLIYGLPKQSL 217

Query: 185 TQWEMELQRALSYAVDHLSLY 205
              +  +++ L    D ++ Y
Sbjct: 218 DSMKFTIEKTLELKPDRIAFY 238


>gi|94312405|ref|YP_585615.1| coproporphyrinogen III oxidase [Cupriavidus metallidurans CH34]
 gi|93356257|gb|ABF10346.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Cupriavidus metallidurans CH34]
          Length = 500

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 5/206 (2%)

Query: 5   SAYENNMTGQGSN---SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +AY   +    +N    L +YVH PFC   C YC  N  + +       ++     EM  
Sbjct: 62  AAYRRALDACRANVPAPLSLYVHIPFCENICYYCGCNKIITKDHTRSARYVDYLAREMAM 121

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              QL   R++    +GGGTP+ ++P  +  ++  + K++ +    E  IE +P  V  +
Sbjct: 122 AAEQLGERRAVMQSHWGGGTPTFLDPVEMRHVMSALHKHFELLPEGEHAIEIDPRRVGDD 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +   + G NRISLGVQ  + +  + + R  +  E    +  AR + F  +S DLIY L
Sbjct: 182 RMELLGELGFNRISLGVQDFDPEVQQAIHRVQSYEETNGVVRAARRLGFRSISMDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT  ++   + R L    D LS+Y
Sbjct: 242 PHQTTQRFSATIDRVLEMRPDRLSVY 267


>gi|253584056|ref|ZP_04861254.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251834628|gb|EES63191.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 422

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 8/205 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ Q    E     Q           IFFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYIADEFDKYGQTNYFKKSEFEVIFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +P  + +IL+ I +N T++ + E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPHQLEIILESIKRNVTLTKDYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++  +F  R +   E I  +   +  F   +  D+IY  P +T+ +   + +    
Sbjct: 168 QTFSDRGRKFYNRTYGKEEVIERLKKLKAFFKGDVCVDIIYNFPDETLEEVIEDARIVKE 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD 221
             +   S Y L + +G+   K+ KD
Sbjct: 228 LELSSASFYSLMVHEGS---KLSKD 249


>gi|298481770|ref|ZP_06999960.1| coproporphyrinogen III oxidase family protein [Bacteroides sp. D22]
 gi|298271992|gb|EFI13563.1| coproporphyrinogen III oxidase family protein [Bacteroides sp. D22]
          Length = 424

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 167/403 (41%), Gaps = 43/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LLPYLEQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 64  QLTGPRSISSIF----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q   P +   IF     GGGTP L+    +  +L+  A      S+   +IE +P   + 
Sbjct: 83  QQLSPLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 ++AGV+RIS+G+QS   + L  L R         A+   R + FP  + DLIY 
Sbjct: 143 ARLTWLKQAGVDRISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFPFFNIDLIYG 202

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +  QT+  +   L++AL +  + L +Y L + +GT   +   D        +V   +Y  
Sbjct: 203 IKGQTVDSFLYSLEQALLFQPNELFIYPLYVRQGTAITEREPD--------DVCFRMYCT 254

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA-----------HSRVK 287
            + +    G    + S   F+   S         GD + +  G+            +R  
Sbjct: 255 ARDLLKDRGF--LQTSMRRFIHHPSTD--AEISCGDEVMLSCGSGGRSYLGNLHYATRYT 310

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           V  H +A  I+ +  +    V +NG        LS E++   F++  L    G+   +++
Sbjct: 311 VSQHCIAGEIDDYMGTADFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYK 364

Query: 348 MLAGRNL-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              G +  DI   R L  + +IE     R+  T  G+   D +
Sbjct: 365 RRFGESPDDIPLFRQLAERQWIENTD-DRICLTSEGIGYSDYI 406


>gi|254718797|ref|ZP_05180608.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|265983778|ref|ZP_06096513.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           83/13]
 gi|306837517|ref|ZP_07470392.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
 gi|264662370|gb|EEZ32631.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           83/13]
 gi|306407409|gb|EFM63613.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
          Length = 444

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAVREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQAVLAAIRTAFDFDPSMEHAIELDPRTVTPLLVKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|160898224|ref|YP_001563806.1| coproporphyrinogen III oxidase [Delftia acidovorans SPH-1]
 gi|160363808|gb|ABX35421.1| oxygen-independent coproporphyrinogen III oxidase [Delftia
           acidovorans SPH-1]
          Length = 460

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           T   +  L +YVH PFC   C YC  N  V R+      ++     EM       G  ++
Sbjct: 48  TAARATPLSLYVHVPFCESLCYYCACNKIVTRHHDRAAVYLDYLAREMALHTAHCGKGQT 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V V      ++ G 
Sbjct: 108 VSQLHLGGGTPTFFSDDELRTLMGLLREHFKLEPGGEYSIEVDPRTVSVERLAVLKELGF 167

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ  +EQ    + R   A +    +  AR + F  ++ DLIY LPKQT   +E 
Sbjct: 168 NRLSFGVQDFDEQVQIAVHRVQPAEQVFELVAAARQLGFASINVDLIYGLPKQTPESFER 227

Query: 190 ELQRALSYAVDHLSLY 205
            L +  +   D ++LY
Sbjct: 228 TLAQVNALRPDRIALY 243


>gi|308404907|ref|ZP_07494180.2| HemN C- region superfamily [Mycobacterium tuberculosis SUMu012]
 gi|308365388|gb|EFP54239.1| HemN C- region superfamily [Mycobacterium tuberculosis SUMu012]
          Length = 245

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  ++ DLIY  P ++       +  A+   VDH+S Y L +E GT   +  + G+L  P
Sbjct: 28  FTHVNLDLIYGTPGESDDDLVRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAP 87

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            ++V    Y L  +  SA G   YE+SN    G E  HNL YW  G + G GPGAH  + 
Sbjct: 88  DDDVLAHRYELVDARLSAAGFAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIG 147

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           V          KHP ++ +++      V   E L ++    E +++ +RLR+G+ +    
Sbjct: 148 V----TRWWNVKHPNTYAEILAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLA--- 200

Query: 348 MLAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               R    E ER   +   G ++     RL  T RG  + D+V+  L
Sbjct: 201 ----RLGAAERERAEAVLADGLLD-YHGDRLVLTGRGRLLADAVVRTL 243


>gi|237739303|ref|ZP_04569784.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422911|gb|EEO37958.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 472

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 5/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL--TGPRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +     T  + +SSI
Sbjct: 149 INLYLGIPFCPTKCKYCSFASYEIGGGVGRFYNDFVEALLKEIQIIGDFLKTYNKKVSSI 208

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +   +  +K  V+RI
Sbjct: 209 YFGGGTPSTLTEIDLERVLKKLLENIDMSDVKEFTFEAGREDSLNIEKLEIMKKYSVDRI 268

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS   ++L+ + R  N          A+ +   ++ DLI  LP++T  +    L +
Sbjct: 269 SLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLGFIINMDLIIGLPEETTEEILDTLAQ 328

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
             +Y +D+L+++ L  ++ +  +K
Sbjct: 329 LNAYDIDNLTIHCLAFKRASKLFK 352


>gi|146338324|ref|YP_001203372.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. ORS278]
 gi|146191130|emb|CAL75135.1| Oxygen-independent coproporphyrinogen III oxidase (EC 1.3.99.22)
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Bradyrhizobium sp. ORS278]
          Length = 474

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
            + +  +Y+H PFC   C YC  N+ V +       +  +   E+  + RQ+  P  +  
Sbjct: 68  ATATASLYLHVPFCRSMCWYCGCNTMVAKRDEPIAIYESALRCEIDMVSRQIGRPLPVGH 127

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I FGGGTP+++ P++   ++  +  ++ V  + EI IE +P ++          +GVNR 
Sbjct: 128 IHFGGGTPTIMAPESFVDLVGSLRHSFRVLPSAEIAIEIDPRTLTKAMIDALAGSGVNRA 187

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS +      + R  +  +  AA + L R     ++FDLIY LP QT+      ++
Sbjct: 188 SLGVQSFDPLVQHAINRVQSFEQTAAATNGLRRAGVAGINFDLIYGLPHQTVASCLDTVR 247

Query: 193 RALSYAVDHLSLY 205
           RA+    D LS++
Sbjct: 248 RAIDLRPDRLSVF 260


>gi|323484131|ref|ZP_08089501.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
 gi|323693224|ref|ZP_08107442.1| hypothetical protein HMPREF9475_02305 [Clostridium symbiosum
           WAL-14673]
 gi|323402573|gb|EGA94901.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
 gi|323502707|gb|EGB18551.1| hypothetical protein HMPREF9475_02305 [Clostridium symbiosum
           WAL-14673]
          Length = 417

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 113/204 (55%), Gaps = 10/204 (4%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWM--R 63
           Y++ +       LG+YVH PFC + C +C +   +  Y   + + +I + + E+     R
Sbjct: 25  YDSRLNYVECTGLGLYVHLPFCSQLCSFCPYCKEL--YSAEKCSLYIDALIKEIHLSAGR 82

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           Q    + ++S++FGGGTP+L  P+ +  I+D + +++ ++    I +E +P +V     +
Sbjct: 83  Q-KEKKPVTSLYFGGGTPALAAPR-LKEIIDALQEHFIITEG--IGLELHPDNVTNETLR 138

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             ++AG+ +IS+G+QS +++ L  LGR     + +A   L+   F  +S D I+ALP QT
Sbjct: 139 LLKEAGITKISIGIQSFQDKYLNILGRRAFDCKRMAEA-LSNFSFETVSMDFIFALPGQT 197

Query: 184 MTQWEMELQRALSYAVDHLSLYQL 207
               + +++ A +   +H+++Y L
Sbjct: 198 SEDLKNDIETAFANGANHIAIYPL 221


>gi|197261819|ref|ZP_03161893.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197240074|gb|EDY22694.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 413

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 165/384 (42%), Gaps = 44/384 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQ 365
            +G+       L  ++    F++  L   +G+S+ D++      A R+   + ER +Q Q
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFP-DLERFIQ-Q 373

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G+  +   SRLR T+ GM + D +
Sbjct: 374 GYCYQ-NGSRLRLTETGMALSDCL 396


>gi|94500833|ref|ZP_01307359.1| oxygen-independent coproporphyrinogen III oxidase [Oceanobacter sp.
           RED65]
 gi|94426952|gb|EAT11934.1| oxygen-independent coproporphyrinogen III oxidase [Oceanobacter sp.
           RED65]
          Length = 465

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++Y  A E +    G   L +YVH PFC   C YC  N  + +++   + ++     E++
Sbjct: 42  LQYDHARETSTNQSGP--LSLYVHIPFCSHVCYYCACNKIITKHRDKAQPYLDVLFKEIE 99

Query: 61  WMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
              Q     R I  + +GGGTP+ I+ + ++ ++  + +++T+  + + + +IE +P  +
Sbjct: 100 MRSQGYDASRPIEQLHWGGGTPTFIDHEQMSALMKKLGEHFTLLDTDDRDYSIEIDPREL 159

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +  +  +  G NR+SLGVQ   E+  + + R    S   A +  AR + F  ++ DLI
Sbjct: 160 QDDTLEHLKAIGFNRVSLGVQDFNEKVQKAVNRIQPRSMTEATLSQARELGFKSINIDLI 219

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLY 205
           Y LP Q    ++  L+  +  + D +S++
Sbjct: 220 YGLPFQNRETFKETLETVIELSPDRISVF 248


>gi|317052185|ref|YP_004113301.1| Coproporphyrinogen dehydrogenase [Desulfurispirillum indicum S5]
 gi|316947269|gb|ADU66745.1| Coproporphyrinogen dehydrogenase [Desulfurispirillum indicum S5]
          Length = 457

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 8/213 (3%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K+   +   M    S     Y+  PFC  +C YC F +   R  + +  ++ + + E++ 
Sbjct: 46  KFQEVFRALMARPRSGKSAAYISIPFCKTRCLYCGFFNRFHRDDL-EAAYVDALIGELKQ 104

Query: 62  MRQ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                   +GP  + +++ GGGTP+ +  +N+  +LD       ++++ EIT+E      
Sbjct: 105 SSSDPAVTSGP--VHALYLGGGTPNALSAENLRRVLDAATCYLPLANDCEITVEGRIHGF 162

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLI 176
             +      + G NR S+GVQS +    R + R  +    + A+  L       +  DL+
Sbjct: 163 GQDKIDACLEGGANRFSIGVQSFDTNVRRSMARIDDRESVLQALERLMATDQAAVVIDLV 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           Y  P QTM  WE +++ A S A+D   LYQL +
Sbjct: 223 YGFPGQTMEIWEEDVRTAASLALDGADLYQLNV 255


>gi|238912155|ref|ZP_04655992.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 413

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 159/382 (41%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+       L  ++    F++  L   +G+S+ D++     +   D        RQ +
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQSY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|312897606|ref|ZP_07757023.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310621239|gb|EFQ04782.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 522

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---- 70
           G  +   Y+H PFC  KC YC F  +     V ++ ++ S + +++  R+   PR     
Sbjct: 65  GKPTQTAYIHIPFCKTKCLYCAFFQNGTDQAV-EDAYVDSLIKDLE--RECHEPRLKNGL 121

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTP+ +  QN   +L  I     ++++ E+T+E     +       +   GV
Sbjct: 122 IHSVFIGGGTPTSLSTQNAERLLRAIRTCLPLANDYELTLEGRIHDLVPEKMDVWMAEGV 181

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQS   +  R +GR  +    +  +  L       +  DLIY LP Q+M  W  
Sbjct: 182 NRMSLGVQSFNTKVRRQVGRLDDKDTVLRRLEELQAYNQCVVIIDLIYGLPSQSMDVWRD 241

Query: 190 ELQRALSYAVDHLSLYQLTI 209
           +L+  ++ A D   LYQL +
Sbjct: 242 DLECLMTSAADGADLYQLNV 261


>gi|34499103|ref|NP_903318.1| coproporphyrinogen III oxidase [Chromobacterium violaceum ATCC
           12472]
 gi|34104954|gb|AAQ61310.1| oxygen-independent coproporphyrinogen III oxidase [Chromobacterium
           violaceum ATCC 12472]
          Length = 468

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 155/384 (40%), Gaps = 21/384 (5%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL        G     L +Y H PFC   C YC  N  + +     + ++     E+  +
Sbjct: 47  YLDKLRQRQIGANRKPLSLYAHIPFCNTICYYCACNKIITKDSSKADLYLDYLEKEISLV 106

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               G R  +  + FGGGTP+ +    +  ++  +  ++   S+ E +IE +P  V+   
Sbjct: 107 SAELGFREKVIQLHFGGGTPTFLSDAQLERLMGILGTHFEFMSDGEYSIEIDPRKVKRET 166

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
                  G NR+S+G+Q  +    + + R     E  A I  AR   F  +S DLIY LP
Sbjct: 167 MLKLADYGFNRVSVGIQDFDPAVQQAVNRVQTVEETRAVIDAAREGGFKSVSLDLIYGLP 226

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLT 239
            Q+       LQ+AL+   D LSLY       ++F    +  +  LPS  + +D L +  
Sbjct: 227 LQSRETMRDTLQKALALDPDRLSLYNYA-HLPSVFKPQRRINEAELPSAALKLDILQDAV 285

Query: 240 QSITSAH----GLHAYEISNHSFLGAESLHNLN-----YWRYGDYIGIGPGAHSRVKVGS 290
           +++T A     G+  +   +     A     L      Y  + D   +  G  S  KVGS
Sbjct: 286 KTLTDAGYVFIGMDHFAKPDDELAVALRQGRLQRNFQGYSTHADCDMLAFGVSSIGKVGS 345

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                  +K  E +   + +    VV    L S+      ++  L  R  +SV+  E + 
Sbjct: 346 --CYSQNDKTLEGYYAALDQGRLPVVRGLTLDSDDVLRRTIIQSLMCRFALSVEAIEEVH 403

Query: 351 GRNL------DIECERNLQRQGFI 368
           G N       ++   R  Q+QG +
Sbjct: 404 GINFAQYFAAEMPQIREFQQQGLL 427


>gi|134101096|ref|YP_001106757.1| hypothetical protein SACE_4563 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004084|ref|ZP_06562057.1| hypothetical protein SeryN2_06162 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913719|emb|CAM03832.1| hypothetical protein SACE_4563 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 515

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 13/260 (5%)

Query: 1   MKYLSAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +KYL     +   +G + S  +Y+H PFC + C +C F   +   +   + ++ + L ++
Sbjct: 61  LKYLHDIGEDEVFRGVTASQNLYLHIPFCEQYCTFCHFYKEINAEQSWVDRYVTALLDDI 120

Query: 60  QWMRQLTGPRS-----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
             + Q    +S      SSI+FGGGTPS +    I  + D + KN     + EIT E +P
Sbjct: 121 SAVAQRVSAQSPLGLNASSIYFGGGTPSYLRAPQITRLFDHLWKNVRTRPDTEITFELHP 180

Query: 115 SSVEVNNFQGYRKA----GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIF 168
             V   +++    A    GVNR   G+QS++   L  L R H   E    + L   R I 
Sbjct: 181 GVVRQPDYEDRLDAIAAGGVNRWVFGIQSMDPDVLVKLNRGHGRDEVYRLLGLLEQRGI- 239

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI+ LP Q +  W   L   ++  ++  +++ L  ++     + +     + P 
Sbjct: 240 DNLNVDLIFGLPLQNLRNWYDTLTELMAAGIEKFNIFPLMFKRSDPITRQYMRNPELFPD 299

Query: 229 ENVAVDLYNLTQSITSAHGL 248
               + ++ + + + S+ G 
Sbjct: 300 ATDRLRMHYMAEFVLSSAGF 319


>gi|289423129|ref|ZP_06424944.1| coproporphyrinogen dehydrogenase [Peptostreptococcus anaerobius
           653-L]
 gi|289156460|gb|EFD05110.1| coproporphyrinogen dehydrogenase [Peptostreptococcus anaerobius
           653-L]
          Length = 523

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 133/265 (50%), Gaps = 12/265 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGP--RSI 71
           + + +YV  PFC  +C YC F S+   ++  K GQ  ++ + L E + +  +     ++I
Sbjct: 196 DKISLYVSIPFCPTRCLYCSFPSNALGIQGSKRGQ--YVDTLLVEAEGLADIITKQGKTI 253

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            S + GGGTP+ +E  ++  ++ G+   + +S   E T+EA  P ++        +K GV
Sbjct: 254 ESFYIGGGTPTALEAHDLDRLITGLFDIFDLSRIEEFTVEAGRPDTITREKLLVLKKHGV 313

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            RIS+  Q++ + +L  +GR H+  + +   ++AR + F  ++ DLI  LP +T      
Sbjct: 314 GRISINPQTMNQVTLDKIGRRHSVEDIVDCFNMARELGFDNINMDLILGLPNETPDMVAH 373

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +   +    ++++++ L +++ +      +D +  L S    V++  +++   + +G +
Sbjct: 374 TMNTIVGLNPENVTVHTLALKRASDLKINIEDYEDELTSYRQMVEMIKISRDAMAQNGYN 433

Query: 250 AYEISNHS-FLGAESLHNLNYWRYG 273
            Y +      LG  +L N+ Y + G
Sbjct: 434 PYYMYRQKHMLG--NLENIGYAKEG 456


>gi|86133678|ref|ZP_01052260.1| oxygen-independent coproporphyrinogen III oxidase [Polaribacter sp.
           MED152]
 gi|85820541|gb|EAQ41688.1| oxygen-independent coproporphyrinogen III oxidase [Polaribacter sp.
           MED152]
          Length = 453

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFG 77
           + +Y+H PFC   C +C  + H+ +    +E +I++ + E Q    LT    I   +  G
Sbjct: 51  ISLYIHLPFCESLCTFCACHKHITKRHEVEEEYIKTVINEWQLYVNLTDETPIIKELHLG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+    +N+  ++ GI KN    +N E + E +PS+      Q     G  R+S GV
Sbjct: 111 GGTPTFFSKENLEYLIQGIFKNAKKHNNAEFSFEGHPSNTTKEQLQTLFNCGFTRVSFGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +   + + R     E       AR I +  +S DLI+ LP QT       + +   
Sbjct: 171 QDYNQNVQKAINRIQTFKEVQQVTDWAREIGYTSISHDLIFGLPHQTKENVIYTINKTKE 230

Query: 197 YAVDHLSLY 205
              D +S Y
Sbjct: 231 LKPDRISFY 239


>gi|312797468|ref|YP_004030390.1| Oxygen-independent coproporphyrinogen-III oxidase [Burkholderia
           rhizoxinica HKI 454]
 gi|312169243|emb|CBW76246.1| Oxygen-independent coproporphyrinogen-III oxidase (EC 1.3.99.22)
           [Burkholderia rhizoxinica HKI 454]
          Length = 487

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 10/224 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFF 76
            L +YVH PFC   C YC  N  + + +   ++++++   E+     L G  R I  + +
Sbjct: 78  DLSLYVHIPFCDTVCFYCGCNKVITKNRSRADSYVEALGQELALQSTLFGQGRRIRQLHW 137

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVS---SNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+ +    I  +++ I +++ ++    +VE +IE +P +++ +     R+ G NR+
Sbjct: 138 GGGTPTFLCQLQIMQLMNSIGEHFMLTPDWDDVEYSIEIDPRAIDDSTIAALRERGFNRL 197

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++    + + R         AI  AR   +  +S DLIY LP QT+  +   L 
Sbjct: 198 SLGVQDVDPLVQQAVNRVQPREMTANAIRQARESGYKSISVDLIYGLPHQTVASYARTLD 257

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD---LVLPSENVAV 233
             +  A D LS++  +       +KM +  D   L  P++ +A+
Sbjct: 258 TIIDLAPDRLSVFAYS--HLPHLFKMQRQIDSNALPSPAQRLAI 299


>gi|239993260|ref|ZP_04713784.1| coproporphyrinogen III oxidase [Alteromonas macleodii ATCC 27126]
          Length = 457

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 14/282 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +YVH PFC   C YC  N  V R+    + ++     E+   R LT  R   S+  G
Sbjct: 52  AVSLYVHIPFCKTLCYYCGCNKMVTRHNEKADEYLDYIEKEILSKRYLTDGRRAVSLHLG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+PS +       ++  + K++T  +  E++IE +P +++ +  Q  +  G  RIS G+
Sbjct: 112 GGSPSFLSETQHTYLMYLLKKHFTFEAGAELSIELDPRNIDKHYLQNLKCLGYTRISFGL 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    + + R  + S     +  AR++ F  ++ DLIY LP Q++  +   +    +
Sbjct: 172 QDTDYNVQKTINRIQSTSHIADLVFEARSLGFDSVNLDLIYGLPNQSIETFSSTIAATKA 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL-TQSITSAH----GLHAY 251
              D +SL+         F    K  +  LPS      LY L   S T+      GL  +
Sbjct: 232 MMPDRISLFSYA-HLPERFAAQRKFAEETLPSSEEKAALYKLAVNSFTNIGYEMIGLDHF 290

Query: 252 EISNHSFLGAESLHNL--NYWRY-----GDYIGIGPGAHSRV 286
            +S  S   A++   L  N+  Y      D IG G  A S V
Sbjct: 291 ALSKDSLAIAKNKGELHRNFQGYTLRGDTDLIGFGVSAISTV 332


>gi|260060768|ref|YP_003193848.1| coproporphyrinogen III oxidase [Robiginitalea biformata HTCC2501]
 gi|88784898|gb|EAR16067.1| coproporphyrinogen III oxidase [Robiginitalea biformata HTCC2501]
          Length = 452

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
           ++ + VY+H PFC   C +C     + +    ++ +I++ L E +  R++ G R  I ++
Sbjct: 48  ASGISVYIHLPFCESLCTFCGCLKRITKRHSVEDPYIRAVLKEWKLYREIFGKRPVIRTL 107

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+ L++ GI +    + + E + E +PS+    + Q     G  R+S
Sbjct: 108 HLGGGTPTFFSPENLQLLVRGILRFADRAPDWEFSFEGHPSNTTREHLQVLYDLGFRRVS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ         + R  +  E      L+R I +  +  D+IY LP+QT       L +
Sbjct: 168 YGVQDYNPGVQEAINRKQSFEEVAEITRLSREIGYTSVGHDIIYGLPRQTADHVRDTLGK 227

Query: 194 ALSYAVDHLSLY 205
            L    D ++ Y
Sbjct: 228 TLDIRPDRIAFY 239


>gi|29840636|ref|NP_829742.1| coproporphyrinogen III oxidase [Chlamydophila caviae GPIC]
 gi|29834986|gb|AAP05620.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           caviae GPIC]
          Length = 458

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 156/357 (43%), Gaps = 19/357 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSIS 72
           +    L +Y H PFC   C YC  +  + R +   E +I + + EM+ +  L  G R  S
Sbjct: 45  EDDRPLSLYFHIPFCQSMCLYCGCSVVINRREDIVEEYIATLIKEMELVHTLLGGKRKTS 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGV 130
            I FGGGTPS +       +   I + + +S   EI IE +P S+  ++ +    +  G 
Sbjct: 105 RIHFGGGTPSRLSRALFEKLFFHIHRLFDLSEVEEIAIEFDPRSLRNDSEKAEFIQSLGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   +  
Sbjct: 165 NRVSLGVQDTQAAVQEAVRRRQSHEESLHAYEKFRALGFESINIDLIYGLPKQTKATFTQ 224

Query: 190 ELQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSA 245
            +   L    D L+L+   ++       K  K+ D+    E  A+  Y    LT+S   A
Sbjct: 225 TIADILQMRPDRLALFSFASVPWIKPHQKAMKESDMPSMEEKFAIYSYARHKLTKSGYQA 284

Query: 246 HGLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
            GL  + +       A     L  N+  Y      D IG+G  + S ++     V +   
Sbjct: 285 IGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMTSTSFIR----GVYLQNA 340

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           K  ES+   +     A ++ + LS + +  ++++  L     +S +++  L G   D
Sbjct: 341 KTLESYHNHILAGSPATIKSKILSEDDRIRKWVIHKLMCTFVVSKEEFSDLFGYRFD 397


>gi|323527062|ref|YP_004229215.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
 gi|323384064|gb|ADX56155.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
          Length = 461

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 23/305 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A  +   G  +  L +Y H PFC   C YC  N    + +    ++++    EM   
Sbjct: 41  YLRAAAD--PGASATDLSLYFHIPFCDTVCFYCGCNKIATKNRAHARSYLERLKREMALQ 98

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEV 119
                  R +S +  GGGTP+ +    +A ++D   +++++      E +IE +P     
Sbjct: 99  ASCFDRRRPVSQLHLGGGTPTFMSNDELAELMDAAREHFSLLPDDEAEYSIEVDPREASP 158

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +     RK G NR+SLGVQ  +    R + R        + +  AR+  F  +  DLIY 
Sbjct: 159 DTIAHLRKLGFNRLSLGVQDFDPLVQRAINRIQPLDMTASVMQAARHAGFHSIGVDLIYG 218

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVD-LY 236
           LP QT+  +   L   +  A D LS++          +KM +  D   LPS  V +  L 
Sbjct: 219 LPHQTVESFTRTLDTMIELAPDRLSVF--AYAHMPQLFKMQRQMDAAALPSPAVRLAILQ 276

Query: 237 NLTQSITSAH----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSR 285
            + + +T+A     G+  + +       A++   L  N+  Y      D IG   GA S 
Sbjct: 277 RVVERLTAAGYVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSI 334

Query: 286 VKVGS 290
            KVG 
Sbjct: 335 GKVGD 339


>gi|284929707|ref|YP_003422229.1| coproporphyrinogen III oxidase [cyanobacterium UCYN-A]
 gi|284810151|gb|ADB95848.1| coproporphyrinogen III oxidase, anaerobic [cyanobacterium UCYN-A]
          Length = 463

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 2/191 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C +C  N+ + + K    ++++  + +++   Q ++  R ++ I +G
Sbjct: 57  LSLYCHIPFCESACYFCGCNTIITKNKKVASSYLEYIVNDIKKTSQFVSSDRLVNQIHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I  + + I  N+ +  N EI+IE NP  V+ N     R  G NRIS G+
Sbjct: 117 GGTPNYLNQLQIEQLFNTIKNNFNIDKNAEISIEVNPKYVDKNLIFFLRNIGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  EE+    + R          +   +   F  ++ DLIY LP Q    +E  +Q+ + 
Sbjct: 177 QDFEEKVQNVINRVQPEEMLFQVMDWVKEANFESVNVDLIYGLPFQNRYTFEKTIQKTIE 236

Query: 197 YAVDHLSLYQL 207
              D ++++  
Sbjct: 237 LNPDRIAVFNF 247


>gi|256378891|ref|YP_003102551.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
 gi|255923194|gb|ACU38705.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
          Length = 460

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 18/227 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +Y H PFC + C +C+  +     +  + ++++ + L+E + +  LT  + +++++ 
Sbjct: 66  DLNLYAHVPFCRQICRFCNLYAVADAGRDDRHDDYVTAVLSEAERLAALTDRKHVTTLYL 125

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNV---EITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTPSL+ PQ +  ++ G+   +         E  +E +P++V+    +  R AG+NRI
Sbjct: 126 GGGTPSLLRPQLLERLVTGLLALFATDPATPPPETALEVDPATVDAAALRDIRAAGINRI 185

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           +LG QS+    +  LGR+   +  +  +  A    F  +  DLIY L  Q+   W   L+
Sbjct: 186 NLGYQSMVSAEVVDLGRDRPTTSGLDLLAAALGTGFANVCVDLIYGLAGQSDEGWLSSLR 245

Query: 193 RALSYAVDHLSLYQLTIEK-------------GTLFYKMHKDGDLVL 226
           +  +     +  Y LT+               G L ++ ++  D VL
Sbjct: 246 QVTALLPPTVCAYPLTLRPFTGYRRRGYRSVDGALLHRRYRVADRVL 292


>gi|225024396|ref|ZP_03713588.1| hypothetical protein EIKCOROL_01271 [Eikenella corrodens ATCC
           23834]
 gi|224942777|gb|EEG23986.1| hypothetical protein EIKCOROL_01271 [Eikenella corrodens ATCC
           23834]
          Length = 610

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y+H PFC   C +C F  +  + + G    +  I+    E +   Q TG   I +++FG
Sbjct: 63  AYLHIPFCANHCVFCGFYRNAWKEEHGGAYVDKVIEELAAEAE---QRTGNGKIQAVYFG 119

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++  ++  ++    +   ++ + E T+E   S   ++  +   +AGVNRIS+G+
Sbjct: 120 GGTPTALDTPDLVRLIRACYQYLPLADDCEFTLEGRMSHFGLDKARAAVEAGVNRISIGI 179

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      R LGR H+  EA   +     +   +  DLI+ LP QT   W  +++RA   
Sbjct: 180 QTFNTAIRRRLGRKHSGEEAYGYLKELCGLDAVIVADLIFGLPGQTDDIWAHDIERAAGL 239

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +  L  Y           +M + G    P          L   + S H  +AY +   +
Sbjct: 240 PLSGLDTYAFNCYPFLPINRMIEKGAFPPP----------LGFDVQSQH--YAYAVRELT 287

Query: 258 FLGAESLHNLNYWRY 272
            LG + + N N++ Y
Sbjct: 288 RLGWQQVSN-NHFAY 301


>gi|317491959|ref|ZP_07950393.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920080|gb|EFV41405.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 442

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 5/289 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISS 73
           +N   +Y+H PFC   C +C F  + +      E +    +   E++    L     I +
Sbjct: 51  ANKRLLYLHIPFCATHCKFCGFYQN-KLETEATEQYCDYLVREIEIEASSPLHQSAPIHA 109

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTP+ +    +  I+  + +   ++ + EIT+E    + +        +AG NR 
Sbjct: 110 IYFGGGTPTALSASQLHRIISTLKRLLPLAPDCEITVEGRILNFDDERVDACLEAGANRF 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+   +  + +GR     EA+  +  LA      +  DL++ LP+QTM  W+ +L 
Sbjct: 170 SIGIQTFNTRIRQRMGRRAAGEEAVVFMRQLAERDRAAVVCDLMFGLPEQTMQDWQNDLD 229

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                 +D + LY L +   T   K  ++  + LP      D Y   ++  +  G     
Sbjct: 230 IVSDLPLDGVDLYALNLLPSTPLGKAVENKRVTLPDVTQRRDFYLTGEAFLADEGWRQLS 289

Query: 253 ISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            S+ +    E +L+NL   +  D +  G  A   +   S+ +  S+E++
Sbjct: 290 NSHWARTTRERNLYNLLIKQGADCLAFGSCAGGNIDGQSYVMERSLERY 338


>gi|323137331|ref|ZP_08072409.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
 gi|322397318|gb|EFX99841.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
          Length = 448

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 1/172 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SL +Y H PFC   C YC  ++   R +     + ++ L E++   Q T  R ++SI +G
Sbjct: 46  SLSLYFHVPFCTAICSYCGCHTKALRQEAPLTAYKETLLRELELTAQTTRARRVTSIHWG 105

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++ P     I + +   + VS   E +IE +P  ++    +   +AGVNR SLGV
Sbjct: 106 GGTPSILGPSRFGEIAERVRDLFAVSDETEHSIELDPRILDAALVEALARAGVNRASLGV 165

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           Q L        GR         A+ L R      ++ DL+Y LP+Q++   E
Sbjct: 166 QDLNPHVQEASGRIQPYEIVERAVGLLRAGGIEAINLDLMYGLPRQSVADVE 217


>gi|205354406|ref|YP_002228207.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205274187|emb|CAR39204.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326629537|gb|EGE35880.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 413

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 160/382 (41%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+       +      VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVELLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+          ++    F++  L   +G+S+ D++     +   D        RQG+
Sbjct: 322 NHGY------LFPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLELFIRQGY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|332533758|ref|ZP_08409616.1| coproporphyrinogen III oxidase, oxygen-independent
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036813|gb|EGI73275.1| coproporphyrinogen III oxidase, oxygen-independent
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 457

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 16/298 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LSA E++     S SL +Y+H PFC + C YC  N  + R++   + ++     E+    
Sbjct: 41  LSAIESST----SRSLSLYIHIPFCSQLCYYCGCNKIITRHQSKADTYLDFLAKEITAQA 96

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    ++  +  GGGTP+ +  + +  ++  + +++  +   E  IE +P S+  N   
Sbjct: 97  PLFKSYTVEQLHLGGGTPTFLTAKQMTRLIKLLEQHFNFTRTTERGIEIDPRSLADNMLV 156

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  G NR+S G+Q   +     + R  NA      I  AR + F  ++ D+IY LP Q
Sbjct: 157 DLRMLGFNRVSFGIQDFNDDVQLAVNRPQNADTVKQLITQARELGFQSINADMIYGLPLQ 216

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQS 241
           T   ++  +++ +  + D +S++         F    K  D  LPS +  + ++ N  + 
Sbjct: 217 TPESFKKTIEQLIELSPDRVSVFNYA-HLPERFAAQRKIKDADLPSAHNKLTMFKNTLEQ 275

Query: 242 ITSAH----GLHAYEISNHSFLGAESLHNLN-----YWRYGDYIGIGPGAHSRVKVGS 290
           +T A     G+  +  +++    A++   L+     Y  +G+   +G G  S  ++G+
Sbjct: 276 MTQAGYQFIGMDHFAKTDNELAVAQNEGKLHRNFQGYTTHGNCDLLGLGVSSISQIGT 333


>gi|332526268|ref|ZP_08402397.1| coproporphyrinogen III oxidase [Rubrivivax benzoatilyticus JA2]
 gi|332110102|gb|EGJ10730.1| coproporphyrinogen III oxidase [Rubrivivax benzoatilyticus JA2]
          Length = 448

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISS 73
           G+  L +Y+H PFC   C YC  N  + ++      ++ +   E+   + +L   +++S 
Sbjct: 39  GTPPLSLYIHIPFCESVCYYCACNKIITKHHERSTEYLDALEAEIAMHVAELGKGQTVSQ 98

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGG+P+ +  + IA +++ +   + V +  EI+IE +P +      +     G NRI
Sbjct: 99  LHFGGGSPTFLTDEEIARLMNTLRDAFKVVAGAEISIEVDPRTATPERLRSLAAVGFNRI 158

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  + +    + R  +       +  AR N F  ++ DLIY LPKQT   +   +Q
Sbjct: 159 SFGIQDFDPEVQEAVHRVQSYDSVRDLVIAARANGFESINADLIYGLPKQTPESFARTIQ 218

Query: 193 RALSYAVDHLSLY 205
           +      D ++LY
Sbjct: 219 QIAELRPDRIALY 231


>gi|218132938|ref|ZP_03461742.1| hypothetical protein BACPEC_00799 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991811|gb|EEC57815.1| hypothetical protein BACPEC_00799 [Bacteroides pectinophilus ATCC
           43243]
          Length = 469

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 3/199 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ + ++    E ++ +   EM+++      R + +I+
Sbjct: 141 NGYSLYIGIPFCPTTCLYCSFTSYSIDKWHDRVEEYLSALFCEMEFVAAKLKNRRLDTIY 200

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ +    +  +L  + K + +S  VE+T+EA  P S+ ++  +  +   V RIS
Sbjct: 201 FGGGTPTTLSADQLDRLLGHMEKCFDMSDIVELTVEAGRPDSLTIDKLKVLKAHNVGRIS 260

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ + +L  +GR H   +   A  +A       ++ DLI  LP +        L  
Sbjct: 261 INPQTMNQATLDIIGRKHTVEQVKEAFAMAHECGLDNINVDLIMGLPGEDEAMIHHTLDE 320

Query: 194 ALSYAVDHLSLYQLTIEKG 212
               A   L+++ L I++ 
Sbjct: 321 VKKLAPTSLTVHSLAIKRA 339


>gi|167551508|ref|ZP_02345263.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205323677|gb|EDZ11516.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 413

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 158/384 (41%), Gaps = 44/384 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEM--QWMRQLTGPRSISSIFFG 77
           +YVH PFC  +C +C+  +       G EN FI S++  +  Q  +    P   +S   G
Sbjct: 42  LYVHMPFCQSRCGFCNLFT-----CTGAENTFIDSYIDAIITQGRQMALAPVHWASFTVG 96

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP L+    +  +         V  N+  TIE +P+              VNR+S+GV
Sbjct: 97  GGTPLLLNIAQLEKLFFSAFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGV 156

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL 
Sbjct: 157 QSFHDGELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALV 216

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           Y  + L LY L        Y M +     G  VL     A DL  L  +  +   +  + 
Sbjct: 217 YQPEELFLYPL--------YNMPRQENMHGYYVL-----ARDL--LRNAGYTQTSMRRFV 261

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV---- 308
           ++      AES    N         +  GA  R  +G+         + ++  K++    
Sbjct: 262 LNPAPSAAAESCGFEN--------SLALGAGGRSYLGNLHYCSPWSSNLQTSRKIIQAFI 313

Query: 309 -RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQ 365
            R +   +     L  ++    F++  L   +G+S+ D++     +   D        RQ
Sbjct: 314 DRPDKTVINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQ 373

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G+  +   SRLR T+ GM + D +
Sbjct: 374 GYCYQ-NGSRLRLTETGMALSDCL 396


>gi|261820817|ref|YP_003258923.1| coproporphyrinogen III oxidase [Pectobacterium wasabiae WPP163]
 gi|261604830|gb|ACX87316.1| Coproporphyrinogen dehydrogenase [Pectobacterium wasabiae WPP163]
          Length = 437

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 5/284 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLR-DDSTATYTRYLLQELAMEAESPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +  L       +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               E +L+NL   +  D + +G GA   +   ++ +  S+E++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYMMERSLERY 338


>gi|53713170|ref|YP_099162.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
 gi|52216035|dbj|BAD48628.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Bacteroides fragilis YCH46]
          Length = 426

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 44/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM 62
           LS Y   + G+ ++   +Y H PFC  KC YC+  S     +      I  +L  M+   
Sbjct: 32  LSPYLERLEGREAS---LYFHIPFCAHKCGYCNLFSQ----QCCDAERISLYLHTMRRQA 84

Query: 63  RQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVE 118
            QL+        +S   GGGTP +++   +  +   +A+ + V  S V  ++E +P   +
Sbjct: 85  EQLSVAAQGLKFTSFAVGGGTPLILDEGQLEELF-CLAELFGVHPSRVFTSVETSPEYTQ 143

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIY 177
            +  +  R  GV R+S+GVQS  E  L+ L R       + A+ ++    FP+ + DLIY
Sbjct: 144 KSVLRQLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIY 203

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  QT+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y 
Sbjct: 204 GIEGQTVESFMRSLNTALTYRPNELFIYPLYVRPGTRIN--------VRSTDDIGYAIYK 255

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
             + +    G    + S   F+  E+      +  GD + +  GA  R  +G+       
Sbjct: 256 SARELLVGQGF--VQTSMRRFVRRETTE--TEFSCGDEVMLSCGAGGRSYLGNLHYATPY 311

Query: 291 ----HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +A  I+ +  +   M   NG        LS+E+    F++  L    G+ + ++
Sbjct: 312 AVRQQAIADEIDHYIRTTDFMTAANGF------LLSTEEMQIRFIIKNLMYHRGVDLAEY 365

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E   G   D    R    +G+IE      +R T+ GM   D +
Sbjct: 366 EKRFGEKPDRNLFREFTDRGWIEETG-RIVRLTEEGMAYSDYI 407


>gi|309379029|emb|CBX22331.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 470

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A  +      +  L +Y+H PFC   C YC  N    + K   + +I+    EM+ 
Sbjct: 48  EYLEALHSRGADASNKPLSLYIHIPFCNTICYYCGCNQIHTKDKGRADAYIEYLEKEMKL 107

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  + + I K + +  + E +IE +P  V   
Sbjct: 108 LSPHLGGRHQVAQLHFGGGTPTFLSDNQLERVFEMIRKYFQLIPDGEYSIEIDPRKVSRE 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 168 TVLKLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT    +  +   LS   D L+LY
Sbjct: 228 PYQTSESIKTTIDTVLSLDPDRLALY 253


>gi|301162891|emb|CBW22438.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 638R]
          Length = 413

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 44/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM 62
           LS Y   + G+ ++   +Y H PFC  KC YC+  S     +      I  +L  M+   
Sbjct: 19  LSPYLERLEGREAS---LYFHIPFCAHKCGYCNLFSQ----QCCDAERISLYLHTMRRQA 71

Query: 63  RQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVE 118
            QL+        +S   GGGTP +++   +  +   +A+ + V  S V  ++E +P   +
Sbjct: 72  EQLSVAAQGLKFTSFAVGGGTPLILDEGQLEELF-CLAELFGVHPSRVFTSVETSPEYTQ 130

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIY 177
            +  +  R  GV R+S+GVQS  E  L+ L R       + A+ ++    FP+ + DLIY
Sbjct: 131 KSVLRQLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIY 190

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  QT+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y 
Sbjct: 191 GIEGQTVESFMRSLNTALTYRPNELFIYPLYVRPGTRI--------DVRSTDDIGYAIYK 242

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
             + +    G    + S   F+  E+      +  GD + +  GA  R  +G+       
Sbjct: 243 SARELLVGQGF--VQTSMRRFVRRETTE--TEFSCGDEVMLSCGAGGRSYLGNLHYATPY 298

Query: 291 ----HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +A  I+ +  +   M   NG        LS+E+    F++  L    G+ + ++
Sbjct: 299 AVRQQTIADEIDHYIRTTDFMTAANGF------LLSTEEMQIRFIIKNLMYHRGVDLAEY 352

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E   G   D    R    +G+IE      +R T+ GM   D +
Sbjct: 353 EKRFGEKPDRNLFREFTDRGWIEETG-RIVRLTEEGMAYSDYI 394


>gi|323143621|ref|ZP_08078298.1| radical SAM domain protein [Succinatimonas hippei YIT 12066]
 gi|322416684|gb|EFY07341.1| radical SAM domain protein [Succinatimonas hippei YIT 12066]
          Length = 406

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 12/276 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ-WM-RQLTGPRSISSIFF 76
             Y++ PFC  +C +C F  ++  YK  + + +  + + E++ W   +    + I +++ 
Sbjct: 119 AAYINVPFCQTRCAFCMF--YIGAYKPEESKRYTDALIKEIRMWQGSKALEDKPIHAVYM 176

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +E  ++  I+    +   +S++ E T+E   S  +    +   KAG NR SLG
Sbjct: 177 GGGTPTALEACDLERIITTCREVLPLSNDYEFTVEGRLSFFDDEKIEACLKAGANRFSLG 236

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ + +  + +GR     E I  + +L+      +  DLI+ LP QT T W  +L    
Sbjct: 237 VQTFDTEIRQSVGRLSTKDELIRGLENLSAYDESSVVIDLIFGLPGQTETTWREDLDIVS 296

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S  +  + LYQL + +G+   K+ K G     P      ++Y +     +    H  ++S
Sbjct: 297 SLPIHGVDLYQLILLEGSPLQKLIKAGKYKYAPDNRERAEMYRI--GCNAMEKAHWKQLS 354

Query: 255 NHSF---LGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
              F       +L+N+      D +  GPGA  +++
Sbjct: 355 VSHFGRNTRERNLYNVLAKSDADTLAFGPGAGGKIQ 390


>gi|257469992|ref|ZP_05634084.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064218|ref|ZP_07928703.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689894|gb|EFS26729.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 422

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 15/284 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ Q    E     Q    +      +FFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYIADEFDKYGQTEYFKKGIFDVVFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +P  + +IL+ I +N T++ + E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPHQLEIILESIKRNVTLAEDYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++  +F  R +   E +  +   +  F   +  D+IY  P+Q +     + +    
Sbjct: 168 QTFSDEGRKFYNRTYGKEETVERLKKLKAFFKGDVCVDIIYNFPEQKIEDVVEDAKIVKK 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVD--LY-NLTQSITSAHGLHAY 251
             +   S Y L + +G+   K+ KD   + V   E++  D  LY +    +      H  
Sbjct: 228 LEISSASFYSLMVHEGS---KLSKDIEAEKVKMEEDMKRDYLLYQHFVDEMLRGDEYHIL 284

Query: 252 EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVK-VGSHRV 293
           E++  +  G +    +      GD   IG GA   V  +G +R+
Sbjct: 285 ELTKIARNGGDDYKYIKVRNTGGDTFPIGVGAGGSVHGIGVYRM 328


>gi|253566837|ref|ZP_04844289.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
 gi|251944400|gb|EES84889.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
          Length = 426

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 44/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM 62
           LS Y   + G+ ++   +Y H PFC  KC YC+  S     +      I  +L  M+   
Sbjct: 32  LSPYLERLEGREAS---LYFHIPFCAHKCGYCNLFSQ----QCCDAERISLYLHTMRRQA 84

Query: 63  RQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVE 118
            QL+        +S   GGGTP +++   +  +   +A+ + V  S V  ++E +P   +
Sbjct: 85  EQLSVAAQGLKFTSFAVGGGTPLILDEGQLEELF-CLAELFGVHPSRVFTSVETSPEYTQ 143

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIY 177
            +  +  R  GV R+S+GVQS  E  L+ L R       + A+ ++    FP+ + DLIY
Sbjct: 144 KSVLRQLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIY 203

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  QT+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y 
Sbjct: 204 GIEGQTVESFMRSLNTALTYRPNELFIYPLYVRPGTRIN--------VRSTDDIGYAIYK 255

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
             + +    G    + S   F+  E+      +  GD + +  GA  R  +G+       
Sbjct: 256 SARELLVGQGF--VQTSMRRFVRRETTE--TEFSCGDEVMLSCGAGGRSYLGNLHYATPY 311

Query: 291 ----HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +A  I+ +  +   M   NG        LS+E+    F++  L    G+ + ++
Sbjct: 312 AVRQQAIADEIDHYIRTTDFMTAANGF------LLSTEEMQIRFIIKNLMYHRGVDLAEY 365

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E   G   D    R    +G+IE      +R T+ GM   D +
Sbjct: 366 EKRFGEKPDRNLFREFTDRGWIEETG-RIVRLTEEGMAYSDYI 407


>gi|332969710|gb|EGK08724.1| oxygen-independent coproporphyrinogen III oxidase [Kingella kingae
           ATCC 23330]
          Length = 607

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 2/186 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGG 79
            YVH PFC   C +C F  +  +  +    +    + E++   ++ TG   I +++FGGG
Sbjct: 55  AYVHIPFCANHCVFCGFYRNAWKDDI-SAGYTDRVIAELKREAEIRTGSGKIQAVYFGGG 113

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  +++A +++   +   ++ + E T+E   S  +    Q    AGVNRIS+GVQ+
Sbjct: 114 TPTALHSRDLARLVEACYRYLPLADDCEFTLEGRMSHFDDEKIQAAISAGVNRISIGVQT 173

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +    R LGR H+  EA A +    +       DLI+ LP QT   W+ ++  A    +
Sbjct: 174 FDTTIRRRLGRKHSGDEARAYLEKLCSYDVITVADLIFGLPAQTDKIWQNDIAIASQLPL 233

Query: 200 DHLSLY 205
             L  Y
Sbjct: 234 SGLDTY 239


>gi|60681431|ref|YP_211575.1| coproporphyrinogen III oxidase [Bacteroides fragilis NCTC 9343]
 gi|60492865|emb|CAH07640.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
          Length = 413

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 44/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM 62
           LS Y   + G+ ++   +Y H PFC  KC YC+  S     +      I  +L  M+   
Sbjct: 19  LSPYLERLEGREAS---LYFHIPFCAHKCGYCNLFSQ----QCCDAERISLYLHTMRRQA 71

Query: 63  RQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVE 118
            QL+        +S   GGGTP +++   +  +   +A+ + V  S V  ++E +P   +
Sbjct: 72  EQLSVAAQGLKFTSFAVGGGTPLILDEGQLEELF-CLAELFGVHPSRVFTSVETSPEYTQ 130

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIY 177
            +  +  R  GV R+S+GVQS  E  L+ L R       + A+ ++    FP+ + DLIY
Sbjct: 131 KSVLRQLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIY 190

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  QT+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y 
Sbjct: 191 GIEGQTVESFMRSLNTALTYRPNELFIYPLYVRPGTRI--------DVRSTDDIGYAIYK 242

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
             + +    G    + S   F+  E+      +  GD + +  GA  R  +G+       
Sbjct: 243 SARELLVGQGF--VQTSMRRFVRRETTE--TEFSCGDEVMLSCGAGGRSYLGNLHYATPY 298

Query: 291 ----HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +A  I+ +  +   M   NG        LS+E+    F++  L    G+ + ++
Sbjct: 299 AVRQQAIADEIDHYIRTTDFMTAANGF------LLSTEEMQIRFIIKNLMYHRGVDLAEY 352

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E   G   D    R    +G+IE      +R T+ GM   D +
Sbjct: 353 EKRFGEKPDRNLFREFTDRGWIEETG-RIVRLTEEGMAYSDYI 394


>gi|325262050|ref|ZP_08128788.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. D5]
 gi|324033504|gb|EGB94781.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. D5]
          Length = 475

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +YV  PFC   C YC F +S + R++   + ++ +   E+  + +    R +++I+
Sbjct: 149 NGYSLYVGIPFCPSICSYCSFGSSPLDRWEDRMDLYMDALCREVSAIGKAAKGRKLNTIY 208

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +    +  +L  + K ++    +E T+EA  P S+     +   +  V RIS
Sbjct: 209 IGGGTPTTLNAAQLERLLSLLEKEFSFDDLLEFTVEAGRPDSITAEKLEVLARHPVTRIS 268

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++++L  +GR H+  +      LAR + F  ++ DLI  LP +        L +
Sbjct: 269 VNPQTMQQKTLDAVGRRHSVQDVKDVFRLARTLGFKNINMDLIAGLPGENAADMRDTLSQ 328

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                 D L+++ L I++   F + ++  DL
Sbjct: 329 IEGLGPDSLTVHSLAIKRAAKFGQENRKIDL 359


>gi|168232936|ref|ZP_02657994.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468765|ref|ZP_03074749.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455129|gb|EDX43968.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205332824|gb|EDZ19588.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 413

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 165/384 (42%), Gaps = 44/384 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHGYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNLDIECERNLQRQ 365
            +G+       L  ++    F++  L   +G+S+ D++      A R+   + ER +Q Q
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFP-DLERFIQ-Q 373

Query: 366 GFIERVQFSRLRCTQRGMTMLDSV 389
           G+  +   SRLR T+ GM + D +
Sbjct: 374 GYCYQ-NSSRLRLTETGMALSDCL 396


>gi|227326144|ref|ZP_03830168.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 437

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 5/284 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLR-DDSTATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +  L       +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               E +L+NL   +  D + +G GA   +   ++ +  S+E++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYMMERSLERY 338


>gi|162419089|ref|YP_001605236.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|162351904|gb|ABX85852.1| radical SAM domain/HemN domain protein [Yersinia pestis Angola]
          Length = 414

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +     E +    L E  M+    L     I +I+FGG
Sbjct: 33  LYLHIPFCATHCTFCGFYQNPLQ-SGSTERYTDYLLRELSMEADSPLLQGGPIHAIYFGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+GVQ
Sbjct: 92  GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGVQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 152 TFNTRIRQRMGRKADRDQAIRFLTDLATRDRAAVVCDLMFGLPHQTPEIWQEDLAIVRQL 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 212 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 271

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D + +G GA
Sbjct: 272 RTTRERNLYNLLIKQGADCLALGSGA 297


>gi|238020864|ref|ZP_04601290.1| hypothetical protein GCWU000324_00759 [Kingella oralis ATCC 51147]
 gi|237867844|gb|EEP68850.1| hypothetical protein GCWU000324_00759 [Kingella oralis ATCC 51147]
          Length = 467

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 3/206 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+S  EN ++G     + +YVH PFC   C YC  N  + +     + ++     EM  
Sbjct: 48  EYVSVLENTLSG-SLKPVSLYVHIPFCNVICYYCGCNKVITKDTSKADEYLTYLEKEMAL 106

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  +   I +++ +  + E +IE +P  V   
Sbjct: 107 LAPHLHGRHKLAQLHFGGGTPTFLSDAQLERVFRMIREHFELLPDGEYSIEIDPRKVSRE 166

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
           +     + G NR+S+G+Q  + +    + R     E    I  AR   F  +S DLIY L
Sbjct: 167 SVFKLGELGFNRMSVGIQDFDPKVQAAVNRIQTVEETREVIEAAREAGFKSISVDLIYGL 226

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P Q++   +  L+  LS + D L+LY
Sbjct: 227 PHQSVASIKPTLETVLSLSPDRLALY 252


>gi|62182473|ref|YP_218890.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224585822|ref|YP_002639621.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62130106|gb|AAX67809.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductases [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224470350|gb|ACN48180.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322716968|gb|EFZ08539.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 413

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 161/382 (42%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ Q M     P    S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGQQMA--LAPVHWGSFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HNA+ A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQESMHGYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S ++  S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPWS------------SNLQT-SRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+       L  ++    F++  L   +G+S+ D++     +   D        +QG+
Sbjct: 322 NHGY------LLPPDEIKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPNLERFIQQGY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|306845256|ref|ZP_07477832.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
 gi|306274415|gb|EFM56222.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
          Length = 444

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAVREDVIENFVNALLGEIRMVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +     +E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDPLMEHAIELDPRTVTPLLVKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|254471915|ref|ZP_05085316.1| oxygen-independent coproporphyrinogen III oxidase [Pseudovibrio sp.
           JE062]
 gi|211959117|gb|EEA94316.1| oxygen-independent coproporphyrinogen III oxidase [Pseudovibrio sp.
           JE062]
          Length = 449

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 2/170 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
              L +Y+H PFC + C YC  N+   R       +++  L E+   +++L   R +  I
Sbjct: 44  DTPLSLYLHVPFCQEMCHYCGCNTKATRKMAPVLAYVELMLKEIDLVLKRLGTGREVHHI 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTPSL+  +    I+D +  N+  S ++E  IE +P +V     +  + AG+ R S
Sbjct: 104 HWGGGTPSLVPREAFLKIVDKLKANFVFSEDIEHAIELDPRTVGDYLAETLKMAGITRTS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           LGVQ  +E   + +GR    +    A+   RN+    ++FDL+Y LP Q+
Sbjct: 164 LGVQDFDEDVQKQIGRIQPYNTVKKAVTALRNVGLHDINFDLMYGLPGQS 213


>gi|269122671|ref|YP_003310848.1| coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
 gi|268616549|gb|ACZ10917.1| Coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
          Length = 468

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 143/293 (48%), Gaps = 22/293 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           ++G+Y+   +C  +C YC F S+++  +Y    E +  + L E++ + +L       +++
Sbjct: 142 TIGIYIGIAYCPSRCSYCSFPSYLKEGKYLERFEEYYNTLLYEIREIGKLVKELGLEVNT 201

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++  + +  +L  I +N+ +    E + E     +++    +  +   V+R
Sbjct: 202 IYVGGGTPSILSKEEMEKMLRVINQNYDIGKLKEFSYELGRIDTIDEEKLEVLKNWNVDR 261

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+  Q+   ++L+ + R H+  +     + A+ +   ++ DLI  LP +T       LQ
Sbjct: 262 ISINPQTFNMKTLKEVNRYHDQEKFDRIFNEAKRMGFIVNMDLILGLPGETTDDILYTLQ 321

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +A +Y +D+L+++ L I+K +    ++KD  L+  + N    +Y     IT   GL+ Y 
Sbjct: 322 KAGTYNMDNLTIHNLAIKKTS---GLNKDNYLLAKNLNYK-KIYGNIYKITREKGLYPYY 377

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR 292
                      E   +S    ES++N+         IGIG GA +++  G  R
Sbjct: 378 MYRQKNSFEWGENIGYSLQDKESVYNIETIEENKTIIGIGAGAVTKLITGDIR 430


>gi|152993668|ref|YP_001359389.1| coproporphyrinogen III oxidase [Sulfurovum sp. NBC37-1]
 gi|151425529|dbj|BAF73032.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurovum sp.
           NBC37-1]
          Length = 455

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 14/242 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
           +G++ L +Y+H PFC   C +C  N      +     +I+    E+  + + L   R + 
Sbjct: 43  EGTDKLSLYIHLPFCRSACYFCGCNVVFTSKEEKLSQYIEYLKKEIDILAEHLDTNRKVI 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK---NWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              FGGGTP+  +   +  I+  + K   NW  S + EI+ E +P        + ++K G
Sbjct: 103 QFHFGGGTPTFYKAFELDEIVTYVKKTFPNW--SEDAEISCEIDPRFFNEEQMKVFQKHG 160

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NRIS GVQ  + +  + + R        AA+ LAR      ++ DLIY LP QT   ++
Sbjct: 161 FNRISFGVQDFDPKVQQEIHRIQPYEITKAAVDLARKYGINSINVDLIYGLPYQTFESFK 220

Query: 189 MELQRALSYAVDHLSLY---QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             LQ A + + D L+++    +   K T    M K  +  LP+ +V + ++  T     +
Sbjct: 221 KTLQEAFTLSPDRLAVFNYAHVPWMKKT----MRKFDETTLPAPDVKLQIFQYTIDFFES 276

Query: 246 HG 247
           +G
Sbjct: 277 NG 278


>gi|15605479|ref|NP_220265.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789487|ref|YP_328573.1| coproporphyrinogen III oxidase [Chlamydia trachomatis A/HAR-13]
 gi|237803176|ref|YP_002888370.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805097|ref|YP_002889251.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311578|ref|ZP_05354148.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276]
 gi|255317879|ref|ZP_05359125.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276s]
 gi|3329206|gb|AAC68341.1| Coproporphyrinogen III Oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|76168017|gb|AAX51025.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis A/HAR-13]
 gi|231273397|emb|CAX10312.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274410|emb|CAX11205.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis
           B/Jali20/OT]
 gi|296436293|gb|ADH18467.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9768]
 gi|296437222|gb|ADH19392.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11222]
 gi|296438152|gb|ADH20313.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11074]
 gi|297140653|gb|ADH97411.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9301]
 gi|297748876|gb|ADI51422.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-EC]
 gi|297749756|gb|ADI52434.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-LC]
          Length = 457

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSI 71
            Q  + L +Y H PFC   C YC     + R     +++I++ + EM+     L G + +
Sbjct: 43  AQEQDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +        G
Sbjct: 103 SRIHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A  L R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLY 205
             ++  L    D L+L+
Sbjct: 223 QTIEHILDMRPDRLALF 239


>gi|149191989|ref|ZP_01870218.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148834167|gb|EDL51175.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 473

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 8/218 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    ++  +++ ++ L E++   +L   +S    +
Sbjct: 60  ANKRCLYIHIPFCRVRCTFCNFFQNAASRQL-VDDYFEALLKEIEIKSRLAWTQSGLFHA 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P  + ++   I  ++ +S++ EIT+E   +      F    + G NR 
Sbjct: 119 VYIGGGTPTDLSPDQVEILGKTIRSSFPLSTDCEITLEGRTNRFTDEMFDKALEGGFNRF 178

Query: 134 SLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS + +  R   R  +     E +AA+  AR+  P +  DL+Y LP QT+  +E +
Sbjct: 179 SFGIQSFDTKVRRSAKRLDDREVVLERVAALS-ARDEAP-IIIDLLYGLPYQTLDVFEQD 236

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           LQ  L        LYQL +        M + G +  P+
Sbjct: 237 LQDFLDTGAHGADLYQLVVGGSAPMLNMVEKGRIPAPA 274


>gi|261380907|ref|ZP_05985480.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
 gi|284796156|gb|EFC51503.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
          Length = 606

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 5/222 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQL-TGPRSISSIFFGG 78
            Y+H PFC   C +C F  +   +K  Q + +    + EM    ++ TG   I +++FGG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNA--WKDSQSSVYTDKIIEEMAAEAEVRTGKGKIRAVYFGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  +++  ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GVQ
Sbjct: 113 GTPTALLTEDLVRLICACYQYLPLAEDCEFTIEGRMSHFDLEKAQACLEAGANRISIGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +      R LGR H+  EA   +     +   +  DL++ LP QT   W+ ++ RA    
Sbjct: 173 TFNTAIRRRLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDEVWQNDIARAAELP 232

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLT 239
           +  L  Y   +       +M + G    P   ++  D Y  T
Sbjct: 233 LSGLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYT 274


>gi|257459001|ref|ZP_05624120.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           gracilis RM3268]
 gi|257443386|gb|EEV18510.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           gracilis RM3268]
          Length = 405

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 9/202 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           +Y+H PFC   C +C     + R K+G E   + +  + +++   ++     + I SI+F
Sbjct: 40  IYLHVPFCDNICSFCS----MMRSKLGDELDEYAKFLIRQIKDYGEMPYFDTKKIKSIYF 95

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS+    +   +L  + KN+ ++ + EI++E    ++++      +  GVNR S+G
Sbjct: 96  GGGTPSVFSETHFEKVLGALHKNFKIADDCEISVETTLHNLDLQKALSLQSFGVNRFSIG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           VQ+   Q    L R H  + AI  +   R  F  M   D+IY  P +++ +   + +   
Sbjct: 156 VQTFSRQGRALLNRVHKPARAIERLKDLREKFDGMLCCDIIYNFPNESVEEALEDARYVD 215

Query: 196 SYAVDHLSLYQLTIEKGTLFYK 217
              +D  S Y L   +G+  YK
Sbjct: 216 ELGLDSASFYSLMFFEGSELYK 237


>gi|212636717|ref|YP_002313242.1| coproporphyrinogen III oxidase [Shewanella piezotolerans WP3]
 gi|212558201|gb|ACJ30655.1| Coproporphyrinogen III oxidase, putative [Shewanella piezotolerans
           WP3]
          Length = 453

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 7/209 (3%)

Query: 21  VYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC K+C +C+F    ++ +R     +   Q  +            +   +++ G
Sbjct: 58  LYIHIPFCRKRCSFCNFFENGANPQRISDYMQQLCQQLMVAAN--SPFAQSQGFDTVYVG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ I    IA++ + I + + +  N E+T+E   +    + +    +AG NR S GV
Sbjct: 116 GGTPTDITASEIAMLGEAINR-FPLLDNAEVTLEGRLNGFNDDKWHNALEAGFNRFSFGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + +  R  GR  + ++ +  +  L+++    +  DLI+ LP QTM+ W+ +LQ  + 
Sbjct: 175 QSFDTEVRRAAGRFDDKAQLLQRLSTLSQHDSASIVVDLIFGLPGQTMSIWQQDLQAVID 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             V  + LYQL    GT   +  + G ++
Sbjct: 235 SGVHGVDLYQLIGLGGTRIDRASEKGKIL 263


>gi|319763990|ref|YP_004127927.1| oxygen-independent coproporphyrinogen iii oxidase [Alicycliphilus
           denitrificans BC]
 gi|330823746|ref|YP_004387049.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
 gi|317118551|gb|ADV01040.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans BC]
 gi|329309118|gb|AEB83533.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
          Length = 460

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)

Query: 2   KYLSAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  + +  L +YVH PFC   C YC  N  + R+    E +++    E+
Sbjct: 36  EYILALQQRRVGSAAKAMPLSLYVHIPFCESLCYYCACNKIITRHPERAEVYLRYLSREI 95

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                  G  + +S + FGGGTP+ +    +  ++  + +++ +    E +IE +P +V+
Sbjct: 96  DLHTAHCGVGQHVSQLHFGGGTPTFLSDDGLRELIGMLKRSFVLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                   + G NR+S GVQ  + +  + + R   A +  A I  AR + F  ++ DLIY
Sbjct: 156 EKRLALLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEKVFALIESARKLGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LP+QT   ++  L +      D ++LY
Sbjct: 216 GLPRQTPESFDRTLAQVAQLRPDRIALY 243


>gi|265763265|ref|ZP_06091833.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
 gi|263255873|gb|EEZ27219.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
          Length = 426

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 44/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM 62
           LS Y   + G+ ++   +Y H PFC  KC YC+  S     +      I  +L  M+   
Sbjct: 32  LSPYLERLEGREAS---LYFHIPFCAHKCGYCNLFSQ----QCCDAERISLYLHTMRRQA 84

Query: 63  RQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVE 118
            QL+        +S   GGGTP +++   +  +   +A+ + V  S V  ++E +P   +
Sbjct: 85  EQLSVAAQGLKFTSFAVGGGTPLILDEGQLEELF-CLAELFGVHPSRVFTSVETSPEYTQ 143

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIY 177
            +  +  R  GV R+S+GVQS  E  L+ L R       + A+ ++    FP+ + DLIY
Sbjct: 144 KSVLRQLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIY 203

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  QT+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y 
Sbjct: 204 GIEGQTVESFMRSLNTALTYRPNELFIYPLYVRPGTRI--------DVRSTDDIGYAIYK 255

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
             + +    G    + S   F+  E+      +  GD + +  GA  R  +G+       
Sbjct: 256 SARELLVGQGF--VQTSMRRFVRRETTE--TEFSCGDEVMLSCGAGGRSYLGNLHYATPY 311

Query: 291 ----HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +A  I+ +  +   M   NG        LS+E+    F++  L    G+ + ++
Sbjct: 312 AVRQQAIADEIDHYIRTTDFMTAANGF------LLSTEEMQIRFIIKNLMYHRGVDLVEY 365

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E   G   D    R    +G+IE      +R T+ GM   D +
Sbjct: 366 EKRFGEKPDRNLFREFTDRGWIEETG-RIVRLTEEGMAYSDYI 407


>gi|56962277|ref|YP_174002.1| coproporphyrinogen III oxidase [Bacillus clausii KSM-K16]
 gi|56908514|dbj|BAD63041.1| coproporphyrinogen III oxidase [Bacillus clausii KSM-K16]
          Length = 478

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 21/201 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFI------------QSFLTEMQWMRQLT 66
           +Y H P C   C +C++   V++Y  + G+E  +             S + +  W+ +  
Sbjct: 60  LYFHVPLCSYICYFCNY---VKKYLPQNGKEEEVLDRWVNLLIKESTSTIGQAPWVTKA- 115

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               I SI+ GGGT SL++P  +A I+  I +++T++++ EI++E NP + + +  +   
Sbjct: 116 ---KIESIYLGGGTASLMKPHQLAKIVAHIREHYTIANDCEISLEGNPDNYQGDEIEQAL 172

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           + G NR S+GVQSLE+  ++ +GR H+   +I AI+         + D+I+ LP QT   
Sbjct: 173 EMGFNRFSMGVQSLEDDVIKAVGRKHDRKMSIDAINKLLLSNKPFNVDIIFGLPHQTANS 232

Query: 187 WEMELQRALSYAVDHLSLYQL 207
              +++      V  +++Y+L
Sbjct: 233 VARDIEVLCDMGVPTITIYRL 253


>gi|255349141|ref|ZP_05381148.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70]
 gi|255503678|ref|ZP_05382068.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70s]
 gi|255507358|ref|ZP_05382997.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D(s)2923]
 gi|289525790|emb|CBJ15271.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis Sweden2]
 gi|296435366|gb|ADH17544.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/150]
 gi|296439083|gb|ADH21236.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/11023]
          Length = 457

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSI 71
            Q  + L +Y H PFC   C YC     + R     +++I++ + EM+     L G + +
Sbjct: 43  AQEQDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +        G
Sbjct: 103 SRIHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A  L R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLY 205
             ++  L    D L+L+
Sbjct: 223 QTIEHILDMRPDRLALF 239


>gi|145300972|ref|YP_001143813.1| coproporphyrinogen III oxidase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853744|gb|ABO92065.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 457

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 4/221 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +L +YVH PFC K C YC  N  + R++   + ++     E++    L   R ++ + 
Sbjct: 50  ARNLSLYVHIPFCHKLCYYCGCNKVITRHQHKADQYLDYLEQEIKAQAPLFKHRLVTQLH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +       ++  + +++  +   EI+IE +P  +E+      R+ G NRISL
Sbjct: 110 WGGGTPTYLNEAQTRRLMAMLREHFQFAEEGEISIEVDPREIELTMLDVLREVGFNRISL 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   +     + R  +     A +  AR + F   + DLIY LP Q    +   L+  
Sbjct: 170 GVQDFNKAVQVAVNREQDNDFIRAMLERARELGFRSTNLDLIYGLPHQNRESFHHTLEEV 229

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAV 233
           L      LS++       + F   H  K+ D+  P E +A+
Sbjct: 230 LKTDPARLSIFNYA-HLPSRFAAQHKLKEEDMPAPREKLAM 269


>gi|187934173|ref|YP_001885233.1| coproporphyrinogen III oxidase [Clostridium botulinum B str. Eklund
           17B]
 gi|187722326|gb|ACD23547.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum B str. Eklund 17B]
          Length = 473

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 135/280 (48%), Gaps = 22/280 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E     +  + + +Y+   FC  KC YC F S+     VG +  ++ +L  +  ++++ G
Sbjct: 136 EEKFVNKKQDKISIYIGMAFCPTKCLYCSFTSNSI---VGNKKMVEPYLKAL--IKEIKG 190

Query: 68  PRS--------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSV 117
             S        I +++FGGGTP+ +  +    ++  I   +    N+ E T+E   P ++
Sbjct: 191 ISSYVKEKNLEIETVYFGGGTPTSVNNEEFKAVMTEIYNGFVKEKNIKEFTVECGRPDTI 250

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
            ++  Q  ++  V RIS+  Q++ +++L+ +GRNH   +      +AR + F  ++ D+I
Sbjct: 251 TLDKLQTMKEYDVTRISINPQTMNDETLKLIGRNHTVDDIKEKFKMARELGFDDINMDII 310

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVD 234
             LP +   +        +    D ++++ L +++G+  Y+  + K G L +P +   + 
Sbjct: 311 IGLPGEGHEELIKTRDELIKLNPDSITVHGLCLKRGSRMYENFILKKG-LDIPKQEEIIK 369

Query: 235 LYNLTQSITSAHGLHAYEI-SNHSFLGAESLHNLNYWRYG 273
           +Y  ++++     +  Y +    + +G  ++ N+ Y + G
Sbjct: 370 MYEESRNLAKHLDISPYYMYRQKNMIG--NMENVGYAKKG 407


>gi|166154088|ref|YP_001654206.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 434/Bu]
 gi|166154963|ref|YP_001653218.1| coproporphyrinogen III oxidase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335293|ref|ZP_07223537.1| coproporphyrinogen III oxidase [Chlamydia trachomatis L2tet1]
 gi|165930076|emb|CAP03559.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis 434/Bu]
 gi|165930951|emb|CAP06513.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 457

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSI 71
            Q  + L +Y H PFC   C YC     + R     +++I++ + EM+     L G + +
Sbjct: 43  AQEQDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +        G
Sbjct: 103 SRIHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A  L R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLY 205
             ++  L    D L+L+
Sbjct: 223 QTIEHILDMRPDRLALF 239


>gi|153869392|ref|ZP_01999013.1| oxygen-independent coproporphyrinogen III oxidase HemN [Beggiatoa
           sp. PS]
 gi|152074090|gb|EDN70985.1| oxygen-independent coproporphyrinogen III oxidase HemN [Beggiatoa
           sp. PS]
          Length = 460

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 130/296 (43%), Gaps = 19/296 (6%)

Query: 13  GQGSN----SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG- 67
            Q SN     L +YVH PFC   C YC  N    + +     ++     E+ +   L   
Sbjct: 44  AQNSNVTLKPLSLYVHIPFCDTVCFYCGCNKVATKNRQLATPYLTHLHQELAFQSALFDR 103

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGY 125
            R ++ + +GGGTP+ +    +  ++ GI  ++ +    + E +IE +P   + +     
Sbjct: 104 ERPVTQLHWGGGTPTFLSHDQMRDLIQGIKTHFQLLDDDSGEYSIEIDPRETQFDTVALL 163

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R+ G NR+SLGVQ  E    + + R     +  A +  AR   F  +S DLIY LP Q +
Sbjct: 164 RELGFNRMSLGVQDFEPNVQKSVNRIQTEEQTFAVLEAARREGFKSISLDLIYGLPHQNV 223

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK--DGDLVLPSENVAV---DLYNLT 239
             +   L + L+   D LS++       TLF    +  + DL  P+E +A+    ++ LT
Sbjct: 224 NSFSNTLNKILAVKPDRLSIFNYA-HLPTLFKPQRRINEADLPSPTEKLAILQQTIHQLT 282

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNL-----NYWRYGDYIGIGPGAHSRVKVGS 290
           ++     G+  + + +     A+    L      Y  + D   IG G  S  KVG 
Sbjct: 283 EAGYIYIGMDHFALPDDELTQAQRNGTLYRNFQGYSTHADCDLIGLGITSIGKVGD 338


>gi|53802626|ref|YP_112654.1| coproporphyrinogen III oxidase [Methylococcus capsulatus str. Bath]
 gi|53756387|gb|AAU90678.1| oxygen-independent coproporphyrinogen III oxidase [Methylococcus
           capsulatus str. Bath]
          Length = 465

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 6/253 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           + L +Y H PFC   C YC  N  V   +     +I     E++   +  GP R +  + 
Sbjct: 59  SPLSLYFHIPFCQTVCFYCACNKIVTANREHAGKYIDYLEKEIELQARHLGPHREVRQLH 118

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +    +  +++   +++ ++   E +IE +P  V+       R+ G NR+SL
Sbjct: 119 WGGGTPTFLNHAQMRRLMEATREHFELAEG-EYSIEIDPRKVDAATIALLREIGFNRMSL 177

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    + + R  +  E +  +  AR   F  +S DLIY LPKQ+++ +   L R 
Sbjct: 178 GVQDFDPAVQKAVNRIQSEEETLRVLTAARAEGFCSVSIDLIYGLPKQSVSGFRHTLDRI 237

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   D +SLY        LF    +  D  LPS +  +++  L  ++    G     I 
Sbjct: 238 LAADPDRISLYNYA-HLPHLFKPQRQIRDEDLPSADTKLEI--LQDAVAHLTGAGYVYIG 294

Query: 255 NHSFLGAESLHNL 267
              F  A++  NL
Sbjct: 295 MDHFAKADNELNL 307


>gi|327405106|ref|YP_004345944.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
 gi|327320614|gb|AEA45106.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
          Length = 451

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 102/206 (49%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K+L   + +     S +L +Y+H P+C   C +C  + H+ +    ++ +I + L E Q 
Sbjct: 35  KWLKLIQMSQQKNASKNLSLYIHLPYCDSLCTFCGCHKHITKNHQVEKRYIDAVLKEWQL 94

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L     I+ +  GGGTP+      ++ +++GI   +  + N E++ EA+P+S  + 
Sbjct: 95  LAISLDKNTQINELHLGGGTPTFFAASELSRLIEGIKYIFPFTPNSELSFEAHPNSTSLE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
           + Q   + G  R+S G+Q  +    + + R     +       A+   F  +S DL+Y L
Sbjct: 155 HLQTLHQQGFRRVSFGIQDYDSIVQQAIHRIQTVDQVANCHKNAQETGFTGISHDLVYGL 214

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           PKQ +  ++  +Q+ L++    ++LY
Sbjct: 215 PKQNLGGFQKTIQQTLNFKPQRIALY 240


>gi|78187433|ref|YP_375476.1| coproporphyrinogen III oxidase [Chlorobium luteolum DSM 273]
 gi|78167335|gb|ABB24433.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Chlorobium
           luteolum DSM 273]
          Length = 474

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +  ++ + L E Q ++    G  ++  +
Sbjct: 49  TTGISMYIHIPYCENYCYFCGCNAHRTQDHSFEGPYLDALLKEWQMYLDVFPGTLNVKEM 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DG+ K+         + E NP S    +       G  R+S
Sbjct: 109 HIGGGTPTFFSPENLTRLIDGLYKHVNRMDGYIFSFETNPRSTTKEHLLALYNVGFRRLS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQ +      +Q+
Sbjct: 169 FGIQDFDPIVQKEINRPQSFELVKEKVDLARQIGFTSVNFDLVYGLPKQNLGTITDTIQK 228

Query: 194 ALSYAVDHLSLY 205
            +    D L+ Y
Sbjct: 229 VMQLRPDRLAFY 240


>gi|89093167|ref|ZP_01166117.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
 gi|89082463|gb|EAR61685.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
          Length = 462

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 8/202 (3%)

Query: 12  TGQGSNSL----GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LT 66
           TGQ +  L     +YVH PFC   C YC  N  + R +   + ++ +   EM+ + +  +
Sbjct: 44  TGQTTADLEAPLSLYVHIPFCEHVCYYCACNKVITRNRKKAQPYLDTVYREMEQLSKWYS 103

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQG 124
             R ++ + +GGGTP+ I  + +  ++D + K++ +    + + +IE +P    +   + 
Sbjct: 104 NNRPVTQLHWGGGTPTFISHEQMIELMDQMRKHFNLLDDDSGDYSIEIDPREASLETIKV 163

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NRISLG+Q ++ +    + R  +  +  A +  AR + F  ++ DLIY LP QT
Sbjct: 164 LRDIGFNRISLGLQDIDPKVQEAVNRVQSVEQTAAILEEARRLGFRSLNLDLIYGLPYQT 223

Query: 184 MTQWEMELQRALSYAVDHLSLY 205
           +  +   L   +    D LS++
Sbjct: 224 LEGFNATLDTVIEMNPDRLSVF 245


>gi|172037240|ref|YP_001803741.1| oxygen independent coprophorphyrinogen III oxidase 1 [Cyanothece
           sp. ATCC 51142]
 gi|171698694|gb|ACB51675.1| oxygen independent coprophorphyrinogen III oxidase 1 [Cyanothece
           sp. ATCC 51142]
          Length = 465

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 95/191 (49%), Gaps = 2/191 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y H PFC   C +C  N+ +   K   + +++  + +++   +L  P R+++ I +G
Sbjct: 57  LSLYCHIPFCETACYFCGCNTIITGNKKVADPYLEYLIKDIERTAELISPNRAVNQIHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I  + + + KN+ +  + EI+IE NP  ++ N     R+ G NRIS G+
Sbjct: 117 GGTPNYLNQSQIDRLFNTLVKNFNIDKDAEISIEVNPRYLDRNLIFFLRQLGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  + + R          +   R   F  ++ DLIY LP Q    ++  +Q+ + 
Sbjct: 177 QDFDPKVQKVINRVQPEEMLFNVMGWMREAEFESVNVDLIYGLPYQNRDTFKKTVQKTIE 236

Query: 197 YAVDHLSLYQL 207
              D ++++  
Sbjct: 237 LDPDRIAVFNF 247


>gi|315498466|ref|YP_004087270.1| oxygen-independent coproporphyrinogen iii oxidase [Asticcacaulis
           excentricus CB 48]
 gi|315416478|gb|ADU13119.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           excentricus CB 48]
          Length = 466

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC + C +C  N+         E ++ + + E+Q +    G R ++ S+ FG
Sbjct: 62  IALYLHIPFCEQMCHFCGCNTRATLKYAPVEAYVGALVAEIQAVGAHLGFRPAVHSVHFG 121

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+PS+++P ++  + + + + + +  + EI IE +P  V ++  + Y   G NR+SLG+
Sbjct: 122 GGSPSMLKPADMGRLFEALHEAFDLLPDAEIAIELDPRRVTLSKIKAYAAFGFNRVSLGI 181

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q         + R     +    + HL  N   R+  DL+Y LP QT+   +  L     
Sbjct: 182 QDTYPAVQAAINRIQPLEQVKTVMGHLRDNGLNRIGIDLVYGLPGQTLKSLDTTLAHVSE 241

Query: 197 YAVDHLSLY 205
              D +S +
Sbjct: 242 LDPDRISAF 250


>gi|260566764|ref|ZP_05837234.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
 gi|260156282|gb|EEW91362.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
          Length = 444

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|225852176|ref|YP_002732409.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256264313|ref|ZP_05466845.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225640541|gb|ACO00455.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|263094586|gb|EEZ18384.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326408677|gb|ADZ65742.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
 gi|326538402|gb|ADZ86617.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis M5-90]
          Length = 444

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|23501542|ref|NP_697669.1| coproporphyrinogen III oxidase [Brucella suis 1330]
 gi|163842927|ref|YP_001627331.1| coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|254703989|ref|ZP_05165817.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|256369093|ref|YP_003106601.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|261754642|ref|ZP_05998351.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 3 str. 686]
 gi|294852019|ref|ZP_06792692.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|23347452|gb|AAN29584.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           1330]
 gi|163673650|gb|ABY37761.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           ATCC 23445]
 gi|255999253|gb|ACU47652.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|261744395|gb|EEY32321.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 3 str. 686]
 gi|294820608|gb|EFG37607.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
          Length = 444

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|213580535|ref|ZP_03362361.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 367

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 18/264 (6%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 9   LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 68

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 69  LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 128

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-----NL 238
              +   L+R      D LS++       TLF    K  D  LPS    +D+      +L
Sbjct: 129 PESFAFTLKRVTELNPDRLSVFNYA-HLPTLFAAQRKIKDADLPSAQQKLDILQETIVSL 187

Query: 239 TQSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           TQ+     G+  +   +     A  E + + N+  Y      D +G+G  A S +  G  
Sbjct: 188 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDGY- 246

Query: 292 RVAISIEKHPESWLKMVRKNGHAV 315
              +  +K  + + + V + G+A+
Sbjct: 247 ---MQNQKELKRYYQQVDERGNAL 267


>gi|17987576|ref|NP_540210.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|254693413|ref|ZP_05155241.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|256044352|ref|ZP_05447256.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113195|ref|ZP_05454063.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|260563704|ref|ZP_05834190.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|261213664|ref|ZP_05927945.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 3 str. Tulya]
 gi|265990767|ref|ZP_06103324.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265994603|ref|ZP_06107160.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 3 str. Ether]
 gi|17983281|gb|AAL52474.1| coproporphyrinogen iii oxidase, anaerobic 1 [Brucella melitensis
           bv. 1 str. 16M]
 gi|260153720|gb|EEW88812.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|260915271|gb|EEX82132.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 3 str. Tulya]
 gi|262765716|gb|EEZ11505.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001551|gb|EEZ14126.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 444

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|62289615|ref|YP_221408.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|82699543|ref|YP_414117.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|189023869|ref|YP_001934637.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|237815110|ref|ZP_04594108.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|254688931|ref|ZP_05152185.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254697065|ref|ZP_05158893.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254729962|ref|ZP_05188540.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|256257179|ref|ZP_05462715.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260545629|ref|ZP_05821370.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260754418|ref|ZP_05866766.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 6 str. 870]
 gi|260757637|ref|ZP_05869985.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 4 str. 292]
 gi|260761464|ref|ZP_05873807.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883446|ref|ZP_05895060.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 9 str. C68]
 gi|297248027|ref|ZP_06931745.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|62195747|gb|AAX74047.1| HemN-1, oxygen-independent coproporphyrinogen III oxidase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82615644|emb|CAJ10631.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator
           protein 3/MiaB/NifB:Radical SAM [Brucella melitensis
           biovar Abortus 2308]
 gi|189019441|gb|ACD72163.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus S19]
 gi|237789947|gb|EEP64157.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|260097036|gb|EEW80911.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260667955|gb|EEX54895.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 4 str. 292]
 gi|260671896|gb|EEX58717.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260674526|gb|EEX61347.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 6 str. 870]
 gi|260872974|gb|EEX80043.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 9 str. C68]
 gi|297175196|gb|EFH34543.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 444

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|33151310|ref|NP_872663.1| coproporphyrinogen III oxidase [Haemophilus ducreyi 35000HP]
 gi|33147530|gb|AAP95052.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Haemophilus ducreyi 35000HP]
          Length = 604

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 7/241 (2%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y H PFC   C +C F  N+    Y KV  +  I+    E   +RQ  G   I +++FG
Sbjct: 55  AYFHIPFCASHCIFCGFYRNAWKEDYSKVYTDKLIEELAYEAS-IRQGNG--KIQAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  +++  ++    +   ++++ E T+E   S  ++   +   +AGVNRIS+GV
Sbjct: 112 GGTPTALATEDLVRLIKACYQYLPLATDCEFTLEGRISHFDIEKARACVEAGVNRISIGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+      + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++  A   
Sbjct: 172 QTFNSAIRKRLGRKHSGEEAYAYLQALCELDAVIVADLIFGLPNQTDEVWANDINVASGL 231

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +  L +Y           KM + G L  P+ +  V   +   ++ +       ++SN+ 
Sbjct: 232 PLSGLDIYAFNNYPFLPINKMIEHGTLP-PAASFEVQAQHYAYAVENLQQAGWTQVSNNH 290

Query: 258 F 258
           F
Sbjct: 291 F 291


>gi|163857399|ref|YP_001631697.1| coproporphyrinogen III oxidase [Bordetella petrii DSM 12804]
 gi|163261127|emb|CAP43429.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella
           petrii]
          Length = 473

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIF 75
            +L +YVH PFC   C YC  N  + R+      ++ +   EM    +L G  + +S + 
Sbjct: 66  GALSLYVHIPFCESLCYYCACNKVITRHHERAARYLDALQREMALHSELVGRGQPVSQLH 125

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+ +    +  ++  +  ++ +  + EI++E +P +            G NR+SL
Sbjct: 126 FGGGTPTFLSDAELDGLMAALRSHFHLLPDAEISVEVDPRTATAERLAHLAGLGFNRLSL 185

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    R + R  +       +H AR + +  ++ DLIY LP QT   +   L++ 
Sbjct: 186 GVQDFDPAVQRAVHRIQSYESVRDLMHSARELGYASVNMDLIYGLPLQTAESFARTLEQV 245

Query: 195 LSYAVDHLSLY 205
                D ++LY
Sbjct: 246 CGLRPDRIALY 256


>gi|123440721|ref|YP_001004713.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087682|emb|CAL10465.1| putative coproporphyrinogen III oxidase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 437

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 11/269 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +       +    L E  M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQTD-STARYTDYLLRELSMEASSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPKQTMTQWEMELQRA 194
           +   +  + +GR  +  E   AIH   N+  R    +  DL++ LP QT   W+ +L   
Sbjct: 175 TFNTRIRQRMGRKASRDE---AIHFLTNLASRDRAAVVCDLMFGLPHQTPETWQEDLAIV 231

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S
Sbjct: 232 RQLPLDGVDLYALNLLPTTPLAKSVENNRIELPTLAQQCDFYCSGAENLAQAGWHQLSNS 291

Query: 255 NHSFLGAE-SLHNLNYWRYGDYIGIGPGA 282
           + +    E +L+NL   +  D + +G GA
Sbjct: 292 HWARTTRERNLYNLLIKQGADCLALGSGA 320


>gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6]
 gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
          Length = 487

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 2/204 (0%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS       G     L VYVH PFC   C YC  N  V R       +I +   E++ + 
Sbjct: 67  LSQRSIGAVGGAGGPLSVYVHVPFCESVCYYCACNKIVTRDHGRSTAYIDALARELELVT 126

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           Q  G  + +S + FGGGTP+ +    +  ++  + +++ +  + E +IE +P +V     
Sbjct: 127 QTLGRGQRVSQLHFGGGTPTFLSDAELDRLMGELRRHFHIEPHGEYSIEIDPRTVSRERL 186

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              ++ G NR+S GVQ  +    + + R     +  A +  AR + F  ++ DLIY LPK
Sbjct: 187 AHLKELGFNRVSFGVQDFDADVQKAVHRVQPFEQVEALMKDARELGFHSINVDLIYGLPK 246

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   +++      D +++Y
Sbjct: 247 QTPESFARTVRQVAGLRPDRIAMY 270


>gi|190573675|ref|YP_001971520.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia K279a]
 gi|190011597|emb|CAQ45216.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas maltophilia K279a]
          Length = 469

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 6/257 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q + +L +YVH PFC   C YC  N  + R +    +++   L E   +  Q    R 
Sbjct: 55  SNQLARALSLYVHVPFCSSPCFYCGCNRVITRDRGRGHSYVSRVLAEADLLAPQFEDGRE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++ + +  +++G+ +  +++ S   + +IE +P  ++  +     + 
Sbjct: 115 VIQLHLGGGTPNFLDAEAMTTLVEGLRRRFDFSDSPQRDFSIELDPRFIDTRDVAMLARL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQW 187
           G NR SLGVQ  + Q    + R     + +  +   R+   R ++ DLIY LP Q++  +
Sbjct: 175 GFNRASLGVQDFDPQVQESINRIQGVQQTLDILRACRDSGMRSVNVDLIYGLPGQSLEGF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+R L+   D L++Y        LF    +  +  LPS    + L  L     SA G
Sbjct: 235 GRTLERVLALRPDRLAVYGYA-HLPHLFRAQKQIDESRLPSPEDKLALLGLAVDKLSAAG 293

Query: 248 LHAYEISNHSFLGAESL 264
            + Y   +H  L  E L
Sbjct: 294 -YQYIGMDHFALPEEDL 309


>gi|22124461|ref|NP_667884.1| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|51594699|ref|YP_068890.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108809985|ref|YP_653901.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108813540|ref|YP_649307.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145600930|ref|YP_001165006.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|150260665|ref|ZP_01917393.1| putative coproporphyrinogen III oxidase [Yersinia pestis CA88-4125]
 gi|165926696|ref|ZP_02222528.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936465|ref|ZP_02225033.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010462|ref|ZP_02231360.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213879|ref|ZP_02239914.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167402200|ref|ZP_02307673.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419408|ref|ZP_02311161.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426180|ref|ZP_02317933.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467579|ref|ZP_02332283.1| coproporphyrinogen III oxidase [Yersinia pestis FV-1]
 gi|170026098|ref|YP_001722603.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|218927493|ref|YP_002345368.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229836544|ref|ZP_04456710.1| putative coproporphyrinogen III oxidase [Yersinia pestis Pestoides
           A]
 gi|229840152|ref|ZP_04460311.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842233|ref|ZP_04462388.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904028|ref|ZP_04519141.1| putative coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|270488987|ref|ZP_06206061.1| radical SAM domain protein [Yersinia pestis KIM D27]
 gi|294502357|ref|YP_003566419.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|21957250|gb|AAM84135.1|AE013656_3 hypothetical [Yersinia pestis KIM 10]
 gi|51587981|emb|CAH19584.1| putative coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777188|gb|ABG19707.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108781898|gb|ABG15956.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|115346104|emb|CAL18972.1| putative coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|145212626|gb|ABP42033.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|149290073|gb|EDM40150.1| putative coproporphyrinogen III oxidase [Yersinia pestis CA88-4125]
 gi|165915581|gb|EDR34190.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921319|gb|EDR38543.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990552|gb|EDR42853.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204854|gb|EDR49334.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963402|gb|EDR59423.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167048381|gb|EDR59789.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054891|gb|EDR64693.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752632|gb|ACA70150.1| Coproporphyrinogen dehydrogenase [Yersinia pseudotuberculosis
           YPIII]
 gi|229679798|gb|EEO75901.1| putative coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|229690543|gb|EEO82597.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696518|gb|EEO86565.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706228|gb|EEO92236.1| putative coproporphyrinogen III oxidase [Yersinia pestis Pestoides
           A]
 gi|262360439|gb|ACY57160.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|262364387|gb|ACY60944.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
 gi|270337491|gb|EFA48268.1| radical SAM domain protein [Yersinia pestis KIM D27]
 gi|294352816|gb|ADE63157.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|320013850|gb|ADV97421.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 437

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +     E +    L E  M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQ-SGSTERYTDYLLRELSMEADSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+GVQ
Sbjct: 115 GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKADRDQAIRFLTDLATRDRAAVVCDLMFGLPHQTPEIWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D + +G GA
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGA 320


>gi|73543005|ref|YP_297525.1| coproporphyrinogen III oxidase [Ralstonia eutropha JMP134]
 gi|72120418|gb|AAZ62681.1| coproporphyrinogen III oxidase, anaerobic [Ralstonia eutropha
           JMP134]
          Length = 489

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 4/230 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + R       ++     EM      + G R +    +G
Sbjct: 66  LSLYLHIPFCENICYYCGCNKVITRDHGRSAKYVHYLAKEMALAAAHIGGRRQVLQSHWG 125

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P+ +  ++  + +++ + +  E +IE +P  V+        + G NR+SLGV
Sbjct: 126 GGTPTFLNPEEMRRVMVSLHEHFDLPAEGEHSIEIDPRRVDHARMALLAELGFNRVSLGV 185

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  + + R     E  A +  AR + F  +S DLIY LP QT  ++   +++ L+
Sbjct: 186 QDFDPEVQQAIHRVQPFEETRAVVDAARELGFRSVSLDLIYGLPHQTTARFNATVEQVLT 245

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSA 245
              D LS+Y        +F    +  +  LPS    +D L +  + +T+A
Sbjct: 246 LRPDRLSVYSYA-HLPHVFKPQRRIDENALPSAGEKLDILVSTIERLTAA 294


>gi|34764148|ref|ZP_00145017.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27886081|gb|EAA23388.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 127

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 6/121 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+  + ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   +    L+ I   ++   N EITIE NP +V++N  +GY+K G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDS----LEKILSKFSYDKNTEITIEVNPKTVDINKLKGYKKLGINRLSIGIQTF 122

Query: 141 E 141
           +
Sbjct: 123 D 123


>gi|317487039|ref|ZP_07945847.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
 gi|316921721|gb|EFV42999.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
          Length = 464

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 8/209 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR----QLTGPRSISSIFF 76
            Y+H PFC   C YC F +   R    +  +  + + E++  R    Q  GP  + +++ 
Sbjct: 81  AYIHVPFCETHCLYCGFYNKAYREDESR-IYADALIQELRLWRGRPGQDAGP--VHAVYM 137

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ ++  ++  IL  +     ++++ EIT+E   S+   +  +   + G NR SLG
Sbjct: 138 GGGTPTALQADDLRRILKEVRAVLPLANDCEITVEGRLSNFGPDKMEACFEGGANRFSLG 197

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS + +  + +GR  +    I  + L ++     +  DLIY  P QTM +W  ++  A 
Sbjct: 198 VQSFDTEIRQAMGRVSDRDTLIRQLQLLQSYDQAAVIVDLIYGFPMQTMERWLADIATAQ 257

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           S  +D    YQL + + T   K  + G L
Sbjct: 258 SLKLDGADCYQLNVYRNTPLAKAIESGRL 286


>gi|225076189|ref|ZP_03719388.1| hypothetical protein NEIFLAOT_01224 [Neisseria flavescens
           NRL30031/H210]
 gi|224952532|gb|EEG33741.1| hypothetical protein NEIFLAOT_01224 [Neisseria flavescens
           NRL30031/H210]
          Length = 606

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 7/241 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQL-TGPRSISSIFFGG 78
            Y+H PFC   C +C F  +   +K  Q + +    + EM    ++ TG   I +++FGG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNA--WKDSQSSVYTDKIIEEMAAESEVRTGKGKIRAVYFGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  +++  ++    +   ++ + E TIE   S  ++   +   +AG NRIS+GVQ
Sbjct: 113 GTPTALLTEDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLEKAKACIEAGANRISIGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +      R LGR H+  EA   +     +   +  DL++ LP QT   W+ ++ RA    
Sbjct: 173 TFNTAIRRRLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDDVWQNDIARAAELP 232

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  L  Y   +       +M + G    P   ++  D Y  T       G    ++SN  
Sbjct: 233 LSGLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWE--QVSNSH 290

Query: 258 F 258
           F
Sbjct: 291 F 291


>gi|308051046|ref|YP_003914612.1| coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
 gi|307633236|gb|ADN77538.1| Coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
          Length = 681

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 8/194 (4%)

Query: 21  VYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQ---LTGPRSISSIFF 76
            Y+H PFC  +C YC F  +     K+ Q  ++++   E+        LTG     +I+ 
Sbjct: 61  AYLHIPFCRTRCSYCAFFQNRSSDDKIAQ--YLKALHRELAMAADQAALTGA-PFDAIYV 117

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS + PQ I  +   I     + ++ E+T EA     +   FQ    AG NR SLG
Sbjct: 118 GGGTPSDLSPQQILELGQRIRDTLPLRTDAELTFEARFHGFDQGRFQACLDAGFNRFSLG 177

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS   +  + LGR  +    + A+  +       +  DLIY LP QT+  W+ +L   +
Sbjct: 178 VQSFNTELRQRLGRIDDGDTVLRALERMCNQDQAVIVADLIYGLPGQTLADWQRDLNTLV 237

Query: 196 SYAVDHLSLYQLTI 209
              V    LYQL +
Sbjct: 238 DTGVGGADLYQLIL 251


>gi|90423477|ref|YP_531847.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB18]
 gi|90105491|gb|ABD87528.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB18]
          Length = 471

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
            Y+H P+C   C +C F  +V R +V  E F+   + E+  +    L     I +++ GG
Sbjct: 84  AYIHMPYCQNHCLFCGFFQNVWRPEV-AEPFVDDVIAEIAAKAATPLVASAPIEAVYIGG 142

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  ++  + +   ++ + EIT+E       V       +AG  RISLGVQ
Sbjct: 143 GTPSALPDQQLVRLIGSLRQLLPLTPDCEITLEGRSHGFGVAKAAAVLEAGATRISLGVQ 202

Query: 139 SLEEQSLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +      R LGR  +  E  +     + L R     +  DLIY LP Q    W  ++  A
Sbjct: 203 TFSTAVRRRLGRKQSGPEVASFLEDLVGLGRA---SIVCDLIYGLPGQDHDGWLRDIDIA 259

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +D ++LY L +  G       + G L  P+ N+A    +    +
Sbjct: 260 NAVGLDGVTLYALNLFPGGPLATAIEHGKLP-PAANIAAQARDYAAGV 306


>gi|261855485|ref|YP_003262768.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
 gi|261835954|gb|ACX95721.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
          Length = 461

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y H PFC   C YC  N  V + +   + ++   + E+    +L G  R++  + +G
Sbjct: 55  LSIYTHIPFCDTVCYYCACNKVVTKDRARAQPYVDDVVLELALQGKLFGQGRAVDQLHWG 114

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  I++   +++ + ++   E +IE +P   +       R  G NRISL
Sbjct: 115 GGTPTFLSDAQMRQIMEATGRHFELKTDDTGEYSIEIDPREADAGTIAVLRDLGFNRISL 174

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +E+    + R  + +E    +  AR   F  +S DLIY LP Q+   +   L   
Sbjct: 175 GVQDFDERVQEAVNRIQSYAETKEVVDAARAEGFHGVSLDLIYGLPHQSRDSFLRTLDTV 234

Query: 195 LSYAVDHLSLY 205
           +  A D LS++
Sbjct: 235 IEMAPDRLSIF 245


>gi|77361664|ref|YP_341239.1| coproporphyrinogen III oxidase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876575|emb|CAI87797.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Pseudoalteromonas haloplanktis TAC125]
          Length = 457

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 16/298 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LSA E++     S +L +Y+H PFC + C YC  N  + R++   + ++     E+    
Sbjct: 41  LSAIESS----NSRALSLYIHIPFCSQLCYYCGCNKIITRHQSKADTYLDFLAIEIAAQA 96

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    ++  +  GGGTP+ +  Q ++ ++  +  ++  +   E  IE +P S+  N   
Sbjct: 97  PLFKDYTLEQLHLGGGTPTFLTTQQMSRLVKLLELHFNFTDATERGIEIDPRSLADNMLV 156

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
                G NR+S G+Q   ++    + R  NA      I  AR + F  ++ D+IY LP Q
Sbjct: 157 DLSNLGFNRVSFGIQDFNDEVQLAVNRPQNADTVKQLITQARELGFKSINADMIYGLPLQ 216

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQS 241
           T   ++  +++ L  + D +S++         F    K  D  LPS +  + ++ N  + 
Sbjct: 217 TPQSFKQTIEQLLELSPDRVSVFNYA-HLPERFAAQRKIKDADLPSAHNKLTMFKNTLEQ 275

Query: 242 ITSAH----GLHAYEISNHSFLGAESLHNLN-----YWRYGDYIGIGPGAHSRVKVGS 290
           +T A     G+  +   N+    A++   L+     Y  +G+   +G G  S  ++G+
Sbjct: 276 MTQAGYQFIGMDHFAKVNNELAVAQNAGQLHRNFQGYTTHGNCDLLGLGVSSISQIGT 333


>gi|146282463|ref|YP_001172616.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
 gi|145570668|gb|ABP79774.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
          Length = 462

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y +A   +   Q    L VY+H PFC   C YC  N  +         +++    E+   
Sbjct: 40  YRAAAARSNQAQPPKPLSVYIHIPFCKSLCYYCACNKIITHKTERAVEYLEYLKREIAMQ 99

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEV 119
             L    R ++ +  GGGTP+    + +A ++  +  A N   S + E ++E +P +V  
Sbjct: 100 GALFDRSRKLTQLHLGGGTPTYFTSEQLADLMASLHQAFNMDDSDSHEFSLEVDPRTVTP 159

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
               G RK G NR+S GVQ  +EQ    + R     +    +  AR+  F  +S DLIY 
Sbjct: 160 EQIHGLRKLGFNRLSFGVQDFDEQVQIAVNRIQTEEQTRELVQAARDARFKSVSVDLIYG 219

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP QT+  ++  L + +    D ++ Y
Sbjct: 220 LPLQTVASFDATLSKIIDIRPDRIAAY 246


>gi|167771532|ref|ZP_02443585.1| hypothetical protein ANACOL_02902 [Anaerotruncus colihominis DSM
           17241]
 gi|167666172|gb|EDS10302.1| hypothetical protein ANACOL_02902 [Anaerotruncus colihominis DSM
           17241]
          Length = 484

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 35/314 (11%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT---GPRSIS 72
           +S  +YV  PFC  +C YC F S  V R       ++     E+++   L    G R + 
Sbjct: 159 DSFSLYVSVPFCPTRCAYCSFVSQSVERDAALIPAYVDRLCEELEYTGCLAKELGLR-LR 217

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVN 131
           +++FGGGTP+ +  +++  ++  +A  + +S   E T+EA  P +V     +     G  
Sbjct: 218 TVYFGGGTPTTLSAEDLTRVMGTVADRFDLSGLWEYTVEAGRPDTVTPQKLRAIYAGGAR 277

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+  Q+L +  L  +GR H +++   A  +AR   F  ++ DLI  LP  T   +   
Sbjct: 278 RVSINPQTLSDTVLCAIGRRHTSAQFFEAFAMARAAGFDCINTDLIAGLPADTPEGFAAS 337

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   L+   ++++++ LT+++ +         +L L    V        ++   A GLH 
Sbjct: 338 VDGVLALHPENVTVHTLTVKRASRLTFDEARSELELVGGMV-----GYARNACEAAGLHP 392

Query: 251 YEISNHSFLGAESLHNLNYWR------YGDYI--------GIGPGAHSRVKVGSHRVAIS 296
           Y +   +   A SL N+ Y        Y  YI         +G GA ++++   H     
Sbjct: 393 YYLYRQTGTLA-SLENVGYAAVGTEGLYNTYIMDETHTILAVGAGASTKLR---HPKTGR 448

Query: 297 IE-----KHPESWL 305
           IE     KHP  ++
Sbjct: 449 IERVYNYKHPTEYI 462


>gi|254701443|ref|ZP_05163271.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261751983|ref|ZP_05995692.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 5 str. 513]
 gi|261741736|gb|EEY29662.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 5 str. 513]
          Length = 444

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    +  + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVDHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|289208685|ref|YP_003460751.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
 gi|288944316|gb|ADC72015.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
          Length = 462

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 26/301 (8%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQW 61
           A   N+ G  +  L +YVH PFC   C YC  N  +    RR     ++  Q    + +W
Sbjct: 44  ARATNVKG-AARPLSLYVHVPFCDTVCFYCACNKVITGNYRRATSYLDSLEQEIALQGEW 102

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEV 119
             +    R +  + FGGGTP+ +  +++  ++  + +++T+ +    E +IE +P +V  
Sbjct: 103 FDR---DRPVRQLHFGGGTPTYLSDEDLTRVMKALGRHFTLETGPEREFSIEIDPRAVRP 159

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
                    G NRIS+GVQ ++    + + R         A+  AR + F   + DLIY 
Sbjct: 160 GTLPLLASLGFNRISVGVQDVDPAVQKAVNRIQPFEVTEQAVRQAREHGFVSTNLDLIYG 219

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPSENVAVDLY 236
           LP QT+  +   L R L    + L++Y        LF      +DGDL   +E +AV L 
Sbjct: 220 LPLQTVDTFSATLDRVLELRPERLAVYNYA-HLPELFKTQRQIRDGDLPPATEKLAV-LE 277

Query: 237 NLTQSITSAH----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSR 285
              Q +T A     G+  + + +     A+    L  N+  Y      D + +GP A  +
Sbjct: 278 MTIQRLTDAGYVYIGMDHFALPDDELAIAQRAGTLQRNFQGYSTRAEYDLVALGPTAIGK 337

Query: 286 V 286
           +
Sbjct: 338 I 338


>gi|114764822|ref|ZP_01444004.1| coproporphyrinogen III oxidase [Pelagibaca bermudensis HTCC2601]
 gi|114542708|gb|EAU45731.1| coproporphyrinogen III oxidase [Roseovarius sp. HTCC2601]
          Length = 442

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 157/348 (45%), Gaps = 21/348 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           + ++ +Y+H PFC + C +C   +         E ++++   E+  + R L     +S +
Sbjct: 39  NGTVSLYLHVPFCRRLCWFCACRTQGTATLGPVETYVETLKAELDLLKRHLPRGVKLSRL 98

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+L+ P  +  ++D + +    + N E ++E +P+ ++          G+NR S
Sbjct: 99  HWGGGTPTLLSPDLMRALIDKVHEVAEFADNAEFSVEIDPNELDGERLDVLAAGGMNRAS 158

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  +E+  + +GR         A+ + R      ++ D++Y LP QT ++    +Q+
Sbjct: 159 IGVQDFDEEIQQTIGRPQGYDVTREAVEMIRERGVHSLNADILYGLPHQTRSRITETVQK 218

Query: 194 ALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-----TSAHG 247
            LS+A D ++LY    +       +M     L  P+E   +DL++  + +      +  G
Sbjct: 219 LLSFAPDRVALYGYAHVPWMAKRQQMIPSEALPTPAER--LDLFDTARRLFVWDGYAEIG 276

Query: 248 LHAYEISNHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           +  +   +     A+    L  N+  Y D      IG+G  + S+   G  + A S   +
Sbjct: 277 IDHFAAPDDGLAIAQKTGRLRRNFQGYTDDTSKVLIGLGASSISKFPQGYAQNAPSTGVY 336

Query: 301 PESWL--KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             S    +     GHA   ++ L +     E LM   R+R G  ++D+
Sbjct: 337 TGSIRDGRFATAKGHAFSGEDTLRARMI--EMLMCDFRIRSGELMRDY 382


>gi|39935191|ref|NP_947467.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris CGA009]
 gi|39649042|emb|CAE27563.1| putative oxygen independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris CGA009]
          Length = 486

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 8/222 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSIS 72
           S +   Y+H P+C   C +C F  +V R ++G    ++ I  F  +       + P  I 
Sbjct: 92  SETAVAYLHVPYCQNHCLFCGFFENVWRPEIGPAYVDDLIAEFAAKSHTPLIASAP--ID 149

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTPS ++  ++A ++  + +   +S++ EIT+E      ++   +    AGVNR
Sbjct: 150 AIYIGGGTPSALDADDLARLIAALHRYLPLSADCEITLEGRSYGFDIAKAKKLADAGVNR 209

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           +S+GVQS   + +R         E +AA         R S   DLIY LP Q+   W  +
Sbjct: 210 LSIGVQSFSTE-VRRRLGRKRGGEEVAAFLAELMALGRTSVVCDLIYGLPGQSDADWRRD 268

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           +       +D ++LY L +  G    +  ++G L  P+   A
Sbjct: 269 IDTVSRIGLDGVTLYALNMFPGGPMARAVENGKLPQPATPAA 310


>gi|288801617|ref|ZP_06407059.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           melaninogenica D18]
 gi|288335659|gb|EFC74092.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           melaninogenica D18]
          Length = 454

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 1/189 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFF 76
           +L  Y H PFC + C YC  NS+    +   E ++Q+   E+  + + L   R IS I +
Sbjct: 47  NLSFYFHMPFCRRLCHYCGCNSYPMAKQEHVEAYVQALHKEIDLVAKHLDNSRRISQIHY 106

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+P+ +    +  + + +   ++     EI IE +P  +   ++QG   A  NR SLG
Sbjct: 107 GGGSPTAMPVSVLKELNEHLLSLFSTIEQPEIAIECHPGYLTAEDWQGLLDARFNRFSLG 166

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ   E+ LR + R  +       + + RN    ++ D ++ LP QT   ++  ++RA++
Sbjct: 167 VQDFNEEVLRLVNRTPSELPTEEIVAILRNAGVNINMDFLFGLPLQTSDSFKKTIERAVA 226

Query: 197 YAVDHLSLY 205
              D ++ +
Sbjct: 227 MRPDRVTTF 235


>gi|167586407|ref|ZP_02378795.1| coproporphyrinogen III oxidase [Burkholderia ubonensis Bu]
          Length = 466

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R +
Sbjct: 54  GASSSELSLYFHIPFCNTACFYCGCNKIATGNRRRARPYLDQLKREMALQAALFDPARPV 113

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    +++T++  ++ E +IE +P +V        R  G
Sbjct: 114 TQLHWGGGTPTFLSDDETAELMAATREHFTLAQDADAEFSIEIDPRTVTPATLVHLRTIG 173

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R    +     +  AR   +  +S DLIY LP QT+  + 
Sbjct: 174 FNRLSLGVQDFDPAVQQAINRIQPLAMTADLLSAARTTGYQSVSVDLIYGLPHQTVASFG 233

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LP     V L  L   + +A G
Sbjct: 234 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDAALPPPATRVALLGLAIEMLTAAG 291


>gi|326316387|ref|YP_004234059.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373223|gb|ADX45492.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 460

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%)

Query: 2   KYLSAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  + +  L +YVH PFC   C YC  N  + R+    + +++    E+
Sbjct: 36  EYVLALQQRRLGSAAKAVPLSLYVHIPFCESLCYYCACNKIITRHPERADVYLRYLSREI 95

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                   P  ++S +  GGG+P+ +    +  +++ + +++T+    E +IE +P +V+
Sbjct: 96  DLHMAHCAPGHAVSQLHIGGGSPTFLGDDALQELMNMLRRSFTLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                   + G NR+S GVQ  +    + + R   A +  A +  AR I F  ++ DLIY
Sbjct: 156 AQRLARLAELGFNRLSFGVQDFDPAVQKAVHRVQPAEQVFALVQEARRIGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LP+QT   ++  L +      D ++LY
Sbjct: 216 GLPRQTPESFDRTLAQVCELRPDRIALY 243


>gi|331018492|gb|EGH98548.1| HemN family oxidoreductase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 198

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 11/201 (5%)

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++ A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE
Sbjct: 1   QAIALAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYE 56

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           +S ++  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +
Sbjct: 57  VSAYAQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYLN---PD 113

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
                  + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + 
Sbjct: 114 KPFQAGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLH 173

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
               +RL  T +G   L+ ++
Sbjct: 174 E-DPARLIATPQGQLFLNDLL 193


>gi|325954979|ref|YP_004238639.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
 gi|323437597|gb|ADX68061.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
          Length = 453

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC   C +C  N  + +    +  +I + L E +    L   R  I  I  G
Sbjct: 51  ISIYIHLPFCESLCTFCACNKRITKQHSVEIPYIDTVLKEWKMYVDLFSSRPKIKEIHLG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P+N+  ++DGI     ++   E ++E +P++    + Q     G  RIS GV
Sbjct: 111 GGTPTFFSPENLKKLIDGIFVYADIAEGHEFSLEGHPNNTTKEHLQVLYNLGFKRISYGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  + + R  +      A   AR I F  +S DLI+ LP QTM+     +Q    
Sbjct: 171 QDYDPKVQKAINRVQSFEAVKKATEEAREIGFTSVSHDLIFGLPHQTMSGMIRTIQLTRE 230

Query: 197 YAVDHLSLY 205
              D +S Y
Sbjct: 231 LNPDRISFY 239


>gi|257468907|ref|ZP_05633001.1| coproporphyrinogen III oxidase [Fusobacterium ulcerans ATCC 49185]
 gi|317063155|ref|ZP_07927640.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688831|gb|EFS25666.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 467

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SI 71
           + +Y+  PFC  KC YC F S+     V RY  G   F+++ L E++   +        I
Sbjct: 144 INLYIGVPFCPTKCKYCSFASYEINGGVGRYYKG---FVETLLEEIEMAGKFLKDEGYKI 200

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            SI+ GGGTPS +  +++  +L  + +N  ++   E T EA    S+     +  ++ G 
Sbjct: 201 ESIYIGGGTPSTLTEEDLEKVLRKVNENIDMTYLKEFTFEAGREDSLTEKKLELVKQYGA 260

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +RISL  Q+  E++LR + RN N         +A+ +   ++ DLI  LP +T       
Sbjct: 261 DRISLNPQTFNEETLRKVNRNFNRENFDKYFKIAKEMGFIINMDLIIGLPDETTEDVLHT 320

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           L     Y +++L+++ L  ++ +  +K  K
Sbjct: 321 LNEVEKYDIENLTVHSLAFKRASKLFKEDK 350


>gi|255030665|ref|ZP_05302616.1| coproporphyrinogen III oxidase [Listeria monocytogenes LO28]
          Length = 163

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 5/152 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+          + ++F
Sbjct: 11  SSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEMELTVAKGPIAPVDTVF 67

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+
Sbjct: 68  VGGGTPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISM 127

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           GVQS   + L+ +GR H   +   ++   R I
Sbjct: 128 GVQSFNNELLKKIGRIHTVKDVYQSVENMRKI 159


>gi|187477889|ref|YP_785913.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella avium
           197N]
 gi|115422475|emb|CAJ49000.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella avium
           197N]
          Length = 459

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           + SL +YVH PFC   C YC  N  V R+      ++++   EM+   Q L   R+++ +
Sbjct: 53  AESLSLYVHIPFCDSVCYYCACNKVVTRHHERATPYLEALRGEMRLQTQGLGARRTVTQL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+ +    +A ++  I  ++ ++   EI+IE +P +++          G NR+S
Sbjct: 113 HFGGGTPTFLSDAELAELMADIRHHFDLAPQAEISIEIDPRTIDAKRLFALAAMGFNRLS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  +      + R          +  AR   F  ++ DLIY LP+Q++  +   + +
Sbjct: 173 YGVQDFDPAVQEAVHRVQPYEAVRELMRSAREAGFRSINVDLIYGLPRQSVASFSRTIAQ 232

Query: 194 ALSYAVDHLSLY 205
                 D ++LY
Sbjct: 233 VGELRPDRIALY 244


>gi|327480719|gb|AEA84029.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri DSM 4166]
          Length = 462

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y +A   +   Q    L VY+H PFC   C YC  N  +         +++    E+   
Sbjct: 40  YRAAAARSNQAQQPKPLSVYIHIPFCKSLCYYCACNKIITHKTERAVEYLEYLKREIAMQ 99

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEV 119
             L    R ++ +  GGGTP+    + +A ++  +  A N   S + E ++E +P +V  
Sbjct: 100 GALFDRSRKLTQLHLGGGTPTYFTSEQLADLMASLHQAFNMDDSDSHEFSLEVDPRTVTP 159

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
               G RK G NR+S GVQ  +EQ    + R     +    +  AR+  F  +S DLIY 
Sbjct: 160 EQIHGLRKLGFNRLSFGVQDFDEQVQIAVNRIQTEEQTRELVQAARDARFKSVSVDLIYG 219

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP QT+  ++  L + +    D ++ Y
Sbjct: 220 LPLQTVASFDATLSKIIDIRPDRIAAY 246


>gi|322513200|ref|ZP_08066328.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
 gi|322121031|gb|EFX92864.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
          Length = 605

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y H PFC   C +C F  N+  + Y K+  +  I+    E   +RQ  G   I +++FG
Sbjct: 55  AYFHIPFCANHCIFCGFYRNAWKQDYSKIYTDKLIEELAYEAG-IRQGNG--KIKAVYFG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  +++  ++    +   ++ + E TIE   S  ++        AGVNRIS+G+
Sbjct: 112 GGTPTALNTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKAHACVAAGVNRISIGI 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+   +  + LGR H+  EA   + +   +   +  DLI+ LP QT   W  +++ A S 
Sbjct: 172 QTFNSKIRKRLGRKHSGEEAYEYLKVLCELDAVVVADLIFGLPNQTDEVWANDIKVASSL 231

Query: 198 AVDHLSLY 205
            +  L +Y
Sbjct: 232 PLSGLDIY 239


>gi|157737488|ref|YP_001490171.1| coproporphyrinogen III oxidase [Arcobacter butzleri RM4018]
 gi|157699342|gb|ABV67502.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri RM4018]
          Length = 455

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 24/346 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L +Y+H PFC   C +C  N+     +  +  +I+    E+  ++  L   R ++ + FG
Sbjct: 48  LSLYIHMPFCRSACYFCGCNTIFTSKEDKKTRYIEYLKKELNILKNHLNTKRVVTQMHFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+   P  + +++  I + +   S + EI+ E +P    V +    +  G NR+S G
Sbjct: 108 GGTPTFFSPSQLEVVITAIKEIFPNFSPDAEISCEVDPRYFTVEHMNVLKAGGCNRLSFG 167

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ L+E+  + + R          I +AR      ++ DLIY LP QT   ++  L++ +
Sbjct: 168 VQDLDEEVQKTIHRIQPFELTQNVIKIAREAGIHSINTDLIYGLPYQTRESFKKTLEQMI 227

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL------H 249
           +   D  +++        L   M K  +   P   V +++   T    +++G       H
Sbjct: 228 TLNTDRFAVFNYA-HVPWLMKTMRKFDETTFPKPEVKLEMLKDTIDFFTSNGYKMVGMDH 286

Query: 250 AYEISNHSFLGAES--LHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             +  +  F   E   LH  N+  Y      D IGIG    + +  G    A +  K  E
Sbjct: 287 FAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGIG---LTSIGNGVDYYAQNF-KELE 341

Query: 303 SWLKMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWE 347
            W   +  NG   V K + LS +    +F++M L     +++K  E
Sbjct: 342 PWENAI-DNGDLPVYKGYRLSDDDMLRQFVIMELMSNFSLNIKRVE 386


>gi|289548773|ref|YP_003473761.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
 gi|289182390|gb|ADC89634.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
          Length = 456

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 99/196 (50%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +    L +Y H PFC   C +C  N  +   K     ++     E++ + +L    R 
Sbjct: 45  SNETKRPLSLYFHIPFCESACWFCGCNVIISHRKDVTGRYLSYVTKELRMLAELLDTSRP 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ + PQ I  + D I +++  S + EI++E +P  ++    +  ++ G 
Sbjct: 105 VVQLHWGGGTPNFLSPQEIEELFDRIKEHFRFSQDAEISVEIDPRYLQEGQLETLKRLGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+G+Q + E   R + R    S     +   R++ F  ++ DLIY LP Q + +++ 
Sbjct: 165 NRISMGLQDINEDVQRAINRLQPESLMREVMKNLRDLGFSSINIDLIYGLPFQNVEKFKR 224

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +    D ++++
Sbjct: 225 TIEKTIELDPDRVAVF 240


>gi|257463863|ref|ZP_05628249.1| coproporphyrinogen III oxidase [Fusobacterium sp. D12]
 gi|317061394|ref|ZP_07925879.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313687070|gb|EFS23905.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 460

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 33/291 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSI 74
           +YV  PFC  KC YC F S+     VG+  + + F++ ++   +LTG      P+ I SI
Sbjct: 134 LYVGIPFCPSKCSYCSFASYEITGGVGK--YYREFVSTLEKEIRLTGEELRRNPQKIESI 191

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTPS +  +++  IL    +        E T EA    S+     +  +K GV+R+
Sbjct: 192 YFGGGTPSTLTEEDLEQILKVFREEIDFRDVKEFTFEAGREDSITRKKLEILKKYGVDRV 251

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS +E++L+ + R  N +         + +   ++ D I  LP+++       L++
Sbjct: 252 SLNPQSFQEKTLKKVNRKFNRAHFEEVYQDCKKLGFIINMDFILGLPEESTEDMIDSLEQ 311

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS---AHGLHA 250
              + V++++L+ L  ++ +   K  +        E   +D   L +SI S      L  
Sbjct: 312 LKKFEVENITLHSLAFKRASKLAKGSQ--------EREKIDRKRLEESIASLMKEKQLEP 363

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKV 288
           Y            E   ++ LG ES+ N+       + I +G G  S+V V
Sbjct: 364 YYLYRQKNMLDWGENIGYAKLGTESIFNMEMIEENQNTIALGGGGISKVVV 414


>gi|153802602|ref|ZP_01957188.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124121865|gb|EAY40608.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 122

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 4/99 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTG-PRSISSI 74
           L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L ++       QL G PR + SI
Sbjct: 7   LSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           F GGGTPSLI  + IA +L G+A+       +EIT+EA+
Sbjct: 67  FIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEAS 105


>gi|124028635|sp|O34162|HEMN_RALEH RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
          Length = 494

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 6/249 (2%)

Query: 4   LSAYENNMTGQGSNS---LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           LS Y + +    +++   L +Y+H PFC   C YC  N  + R       ++     EM 
Sbjct: 48  LSLYHDALAACRADAPAPLSLYLHIPFCENICYYCGCNKIITRDHGRSARYVNYLGREMA 107

Query: 61  WMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +    GPR  +    +GGGTP+ ++P  +  ++  + +++ +++  E +IE +P  V+ 
Sbjct: 108 LVADRLGPRRQVLQSHWGGGTPTFLDPGEMRRVMALLHEHFELAAEGEHSIEIDPRRVDH 167

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                  + G NR+SLGVQ  + +  + + R     E  A +  AR + F  +S DLIY 
Sbjct: 168 ARMALLAELGFNRVSLGVQDFDPEVQQAIHRIQPFEETRAVVDAARTLGFRSVSLDLIYG 227

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   
Sbjct: 228 LPHQTAARFGRTIDQVLALRPDRLSVYSYA-HLPHVFKPQRRIDENALPPAGEKLDILVS 286

Query: 239 TQSITSAHG 247
           T    SA G
Sbjct: 287 TIERLSAEG 295


>gi|304407551|ref|ZP_07389203.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
 gi|304343502|gb|EFM09344.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
          Length = 517

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 31/294 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLT----EM----QWMRQLTG 67
           + + +Y+  PFC  KC YC F +    Y + G++  +  FLT    EM    +W+++   
Sbjct: 175 DEVSIYIGIPFCPTKCAYCTFPA----YDINGRQGSVNGFLTGLHEEMREIGEWLKR--N 228

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGY 125
              I++I++GGGTP+ I  + +  +   + + +    +V EIT+EA  P ++        
Sbjct: 229 DVKITTIYYGGGTPTSITAEEMDAMYSLMYEVFPNVDDVREITVEAGRPDTITPEKLAVM 288

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           +K GV+RIS+  QS  +++L  +GR+H   E I    LAR      ++ DLI  LP + +
Sbjct: 289 QKWGVDRISINPQSYIQETLEVIGRHHTVEETIRKFELARECGMDNINMDLIIGLPNEGL 348

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            ++E  L    +   + L+++ L+ ++ +   +   D    +        +       T 
Sbjct: 349 PEFEHTLSETANLMPESLTVHTLSFKRASEMTRHRGDQKFKVADREEITAMMRRAVEWTD 408

Query: 245 AHGLHAY------------EISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSR 285
            +G   Y            E   ++  G ESL+N L        +G+G GA S+
Sbjct: 409 EYGYIPYYLYRQKNILGNLENVGYALAGMESLYNILIIEEMQSIVGLGCGASSK 462


>gi|113869551|ref|YP_728040.1| coproporphyrinogen III oxidase [Ralstonia eutropha H16]
 gi|113528327|emb|CAJ94672.1| Oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           eutropha H16]
          Length = 522

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 6/249 (2%)

Query: 4   LSAYENNMTGQGSNS---LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           LS Y + +    +++   L +Y+H PFC   C YC  N  + R       ++     EM 
Sbjct: 76  LSLYHDALAACRADAPAPLSLYLHIPFCENICYYCGCNKIITRDHGRSARYVNYLGREMA 135

Query: 61  WMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +    GPR  +    +GGGTP+ ++P  +  ++  + +++ +++  E +IE +P  V+ 
Sbjct: 136 LVADRLGPRRQVLQSHWGGGTPTFLDPGEMRRVMALLHEHFELAAEGEHSIEIDPRRVDH 195

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                  + G NR+SLGVQ  + +  + + R     E  A +  AR + F  +S DLIY 
Sbjct: 196 ARMALLAELGFNRVSLGVQDFDPEVQQAIHRIQPFEETRAVVDAARTLGFRSVSLDLIYG 255

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   
Sbjct: 256 LPHQTAARFGRTIDQVLALRPDRLSVYSYA-HLPHVFKPQRRIDENALPPAGEKLDILVS 314

Query: 239 TQSITSAHG 247
           T    SA G
Sbjct: 315 TIERLSAEG 323


>gi|153949384|ref|YP_001402751.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|186893702|ref|YP_001870814.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|152960879|gb|ABS48340.1| radical SAM domain/HemN domain protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|186696728|gb|ACC87357.1| Radical SAM domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 437

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +     E +    L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQ-SGSTERYTDYLLRELSMEADSPLLQGGPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+GVQ
Sbjct: 115 GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKADRDQAIRFLTDLATRDRAAVVCDLMFGLPHQTPEIWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D + +G GA
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGA 320


>gi|120610216|ref|YP_969894.1| coproporphyrinogen III oxidase [Acidovorax citrulli AAC00-1]
 gi|120588680|gb|ABM32120.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           citrulli AAC00-1]
          Length = 460

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 4/208 (1%)

Query: 2   KYLSAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  + +  L +YVH PFC   C YC  N  + R+    + +++    E+
Sbjct: 36  EYVLALQQRRLGSAAKAVPLSLYVHIPFCESLCYYCACNKIITRHPERADVYLRYLSREI 95

Query: 60  QW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              M       ++S +  GGG+P+ +  + +  +++ + +++T+    E +IE +P +V+
Sbjct: 96  DLHMAHCALGHAVSQLHIGGGSPTFLGDEALQELMNMLRRSFTLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                   + G NR+S GVQ  +    + + R   A +  A +  AR I F  ++ DLIY
Sbjct: 156 AGRLARLAELGFNRLSFGVQDFDPAVQKAVHRVQPAEQVFALVQEARRIGFESINVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LP+QT   ++  L +      D ++LY
Sbjct: 216 GLPRQTPESFDRTLAQVCELRPDRIALY 243


>gi|319943099|ref|ZP_08017382.1| oxygen-independent coproporphyrinogen III oxidase [Lautropia
           mirabilis ATCC 51599]
 gi|319743641|gb|EFV96045.1| oxygen-independent coproporphyrinogen III oxidase [Lautropia
           mirabilis ATCC 51599]
          Length = 510

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 2/200 (1%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLT 66
           +N    Q    + VYVH PFC   C YC  N    R       ++Q+   E++ +   L 
Sbjct: 43  DNRTLRQPGQPVTVYVHIPFCESICHYCACNRIGTRDHARAVAYLQTLKQEIRLYAAHLH 102

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               IS +  GGGTP+    + +A +L+ +     + S  E +IE +P +V+       R
Sbjct: 103 RDVRISQLHLGGGTPTFFSDEELAELLNTLDAEIGLQSQAECSIEIDPRTVDNTRLTNIR 162

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           + G +RISLGVQ L+ +    + R       +  +  AR + F  ++ DL+Y LPKQT+ 
Sbjct: 163 RMGFDRISLGVQDLDPKVQVAIHRIQPEEMLVGLMEHARTLDFKSINIDLVYGLPKQTLE 222

Query: 186 QWEMELQRALSYAVDHLSLY 205
                L R  +     +++Y
Sbjct: 223 TLAHTLDRIAALRPGRMAIY 242


>gi|315637214|ref|ZP_07892434.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri JV22]
 gi|315478486|gb|EFU69199.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri JV22]
          Length = 455

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 24/346 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L +Y+H PFC   C +C  N+     +  +  +I+    E+  ++  L   R ++ + FG
Sbjct: 48  LSLYIHMPFCRSACYFCGCNTIFTSKEDKKTRYIEYLKKELNILKNHLNTKRVVTQMHFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+   P  + +++  I + +   S + EI+ E +P    V +    +  G NR+S G
Sbjct: 108 GGTPTFFSPSQLEVVITAIKEIFPNFSPDAEISCEVDPRYFTVEHMNVLKAGGCNRLSFG 167

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ L+E+  + + R          I +AR      ++ DLIY LP QT   ++  L++ +
Sbjct: 168 VQDLDEEVQKTIHRIQPFELTQNVIKIAREAGIHSINTDLIYGLPYQTRESFKKTLEQMI 227

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL------H 249
           +   D  +++        L   M K  +   P   V +++   T    +++G       H
Sbjct: 228 TLNTDRFAVFNYA-HVPWLMKTMRKFDETTFPKPEVKLEMLKDTIDFFTSNGYKMVGMDH 286

Query: 250 AYEISNHSFLGAES--LHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             +  +  F   E   LH  N+  Y      D IGIG    + +  G    A +  K  E
Sbjct: 287 FAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGIG---LTSIGNGVDYYAQNF-KELE 341

Query: 303 SWLKMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWE 347
            W   +  NG   V K + LS +    +F++M L     +++K  E
Sbjct: 342 PWENAI-DNGDLPVYKGYRLSDDDMLRQFVIMELMSNFSLNIKRVE 386


>gi|189499627|ref|YP_001959097.1| coproporphyrinogen III oxidase [Chlorobium phaeobacteroides BS1]
 gi|189495068|gb|ACE03616.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides BS1]
          Length = 473

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 8/243 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTG 67
           N+ TG     + +Y+H P+C   C +C  N++  +  V +E ++++ L E Q ++    G
Sbjct: 47  NDTTG-----VSMYIHIPYCENHCYFCGCNAYRTQDHVYEEPYLEALLKEWQMYLDVFPG 101

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             ++  +  GGGTP+   P N+  +++G+ ++         + E NP S    + +    
Sbjct: 102 TLNVKEMHIGGGTPTFFSPDNLIKLINGLYEHVNRMDGYMFSFETNPRSTTTEHLEALYS 161

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+S G+Q  +      + R          + +AR I F  ++FDL+Y LPKQT+  
Sbjct: 162 VGFRRMSFGIQDFDPVVQEEINRLQPFELVKEKVDIARKIGFTSINFDLVYGLPKQTLAT 221

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               + + +    D ++ Y        ++    K  +  LP   V  +LY+    +  + 
Sbjct: 222 VTDTISKVMELKPDRIAFYAYG-HNPHMYEGQRKFKEADLPVGAVKQELYDKGLEMLESI 280

Query: 247 GLH 249
           G H
Sbjct: 281 GYH 283


>gi|332283879|ref|YP_004415790.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
 gi|330427832|gb|AEC19166.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
          Length = 473

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L VYVH PFC   C +C  N  + +       +++    EM+ +   L   R    +  G
Sbjct: 69  LSVYVHLPFCESLCYFCACNKIITQDHGRSAEYLRYLDKEMELVAGSLGSDRKTGQLHLG 128

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  ++D + +++  +S+ E+ +E +P +V           G NR S GV
Sbjct: 129 GGTPTFLSSAELTQLMDSLRRHFEFTSDAELGVEIDPRTVNDKTLNMLSGLGFNRTSFGV 188

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R    +   AA++ +R   F  ++ DLIY LPKQT+  +   L + L 
Sbjct: 189 QDFDPDVQAAVNRIQPLAMVEAALNASRQAGFESVNIDLIYGLPKQTLASFNHTLDKVLH 248

Query: 197 YAVDHLSLY 205
            + D ++LY
Sbjct: 249 LSPDRIALY 257


>gi|311067471|ref|YP_003972394.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
 gi|310867988|gb|ADP31463.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
          Length = 500

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 138/296 (46%), Gaps = 31/296 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----- 68
           Q  + + +Y+  PFC  KC YC F ++  +   GQ   + SFL  + +  Q  G      
Sbjct: 167 QVKDEVSIYIGIPFCPTKCAYCTFPAYAIQ---GQAGRVGSFLWGLHFEIQKIGEWLKRH 223

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGY 125
              +++I+FGGGTP+ I  + + L+ + + +++     + EIT+EA  P ++        
Sbjct: 224 EIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKQIREITVEAGRPDTITEEKLDVL 283

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTM 184
            K  ++RIS+  QS E ++L+ +GR+H   E I   HL+R +    ++ DLI  LP + +
Sbjct: 284 NKYHIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSREHGMSNINMDLIIGLPGEGV 343

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGT-LFYKMHK-------------DGDLVLPSEN 230
            ++   L+       + L+++ L+ ++ + +    HK             D  +V   EN
Sbjct: 344 EEFRNSLRETEKLMPESLTVHTLSFKRASEMTRNKHKYKVADRDEVSQMMDDAVVWTKEN 403

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
                Y   Q     + L   E   +S  G ES++N+         IGIG GA S+
Sbjct: 404 GYEPYYLYRQK----NILGNLENVGYSVPGQESIYNIMIMEEVQTIIGIGCGAASK 455


>gi|295087727|emb|CBK69250.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides
           xylanisolvens XB1A]
          Length = 413

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 166/403 (41%), Gaps = 43/403 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 19  LLPYLEQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 71

Query: 64  QLTGPRSISSIF----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q   P +   IF     GGGTP L+    +  +L+  A      S+   +IE +P   + 
Sbjct: 72  QQLSPLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADP 131

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 ++AGV RIS+G+QS   + L  L R         A+   R + FP  + DLIY 
Sbjct: 132 ARLAWLKQAGVARISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFPFFNIDLIYG 191

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +  QT+  +   L++AL +  + L +Y L + +GT   +   D        +V   +Y  
Sbjct: 192 IKGQTVDSFLYSLEQALLFQPNELFIYPLYVRQGTAITERESD--------DVCFRMYCA 243

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-------- 290
            + +    G    + S   F+   S         GD + +  G+  R  +G+        
Sbjct: 244 ARDLLKDRGF--LQTSMRRFIHHPSTD--AEISCGDEVMLSCGSGGRSYLGNLHYATRYT 299

Query: 291 ---HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                +A  I+ +  +    V +NG        LS E++   F++  L    G+   ++E
Sbjct: 300 VCQRYIAEEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYE 353

Query: 348 MLAGRNL-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              G +  DI   R L  + +IE     R+  T  G+   D +
Sbjct: 354 RRFGESPDDIPLFRQLAERQWIENTD-DRICLTSEGIGYSDYI 395


>gi|300022107|ref|YP_003754718.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523928|gb|ADJ22397.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 450

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 99/193 (51%), Gaps = 6/193 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           + + +Y+H P+C   C YC  N+ +        N++     E++ +    G R  +  + 
Sbjct: 46  DPVSLYLHIPYCRSMCWYCGCNTTISARDEPVANYLDVLHREIEMVASQIGRRQRVKYVH 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP++++P     ++  +   + +  + E+ IE +P ++        R +G+NR S+
Sbjct: 106 FGGGTPTIMKPAQFIGLVHLLRDAFDIVDDAELAIEIDPRTISREMLAAMRGSGINRASI 165

Query: 136 GVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           GVQ+ +   +QS+  +      S+ +AA  L R    R++FDLIY LP QT+      ++
Sbjct: 166 GVQTFDPKVQQSINRIQSVECTSQTVAA--LRRIGINRINFDLIYGLPNQTVQSCIETVK 223

Query: 193 RALSYAVDHLSLY 205
            AL+   D L+++
Sbjct: 224 TALTMKPDRLAVF 236


>gi|192362422|ref|YP_001981480.1| coproporphyrinogen III oxidase [Cellvibrio japonicus Ueda107]
 gi|190688587|gb|ACE86265.1| oxygen-independent coproporphyrinogen III oxidase [Cellvibrio
           japonicus Ueda107]
          Length = 463

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 4/200 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP- 68
           + + +    L +Y H PFC   C YC  N  V   K     ++   + EM    +L  P 
Sbjct: 48  DRSNRSRRPLSLYFHIPFCDTLCFYCGCNKVVTHNKNRALPYLHRMIQEMALYAELVEPG 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYR 126
           R++  + +GGGTP+ I    ++L++    + +T++   + E ++E +P  V ++  +  R
Sbjct: 108 RTVKQLHWGGGTPTFISTDEMSLLMKSTRRLFTLAPVDDGEFSVEIHPGRVSIDTMRHLR 167

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMT 185
           + G NR+S+GVQ  +E+    + R +   +    ++  R    R +S DLIY LP Q++ 
Sbjct: 168 QLGFNRVSMGVQDFDERVQVAVNRYNTLDQVSRLVNALREQHYRSISMDLIYGLPMQSLR 227

Query: 186 QWEMELQRALSYAVDHLSLY 205
             +  L + +    D LS++
Sbjct: 228 SLQDTLHKVIDLQPDRLSIF 247


>gi|294142336|ref|YP_003558314.1| coproporphyrinogen III oxidase [Shewanella violacea DSS12]
 gi|293328805|dbj|BAJ03536.1| coproporphyrinogen III oxidase, putative [Shewanella violacea
           DSS12]
          Length = 460

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 13/205 (6%)

Query: 20  GVYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            +Y+H PFC K+C +C+F      ++ + RY    E+  Q   T  +     +G  +  +
Sbjct: 51  ALYIHIPFCRKRCSFCNFFENGSNSARISRYV---ESLSQQLYTASKTPFVKSG--TFDT 105

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ ++   IA+I + I + + ++ N EIT+E   +      F     +G NR 
Sbjct: 106 VYVGGGTPTDMQASEIAIIGEAI-QAFPLAKNAEITLEGRLNDFTDAKFDAALASGFNRF 164

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q     GR  N    I  +  L+++    +  DLI+ LP QTM  W  +LQ
Sbjct: 165 SFGVQSFNTQVRLAAGRFDNREVLIERLQELSKHPSASIVADLIFGLPGQTMEIWLQDLQ 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
             +  +V  + LYQL   +GT   K
Sbjct: 225 DVIQSSVHGVDLYQLIGLQGTRLSK 249


>gi|253689126|ref|YP_003018316.1| Coproporphyrinogen dehydrogenase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755704|gb|ACT13780.1| Coproporphyrinogen dehydrogenase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 437

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 5/284 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLR-DDSTATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +  L       +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               E +L+NL   +  D + +G GA   +   ++ +   +E++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYMMERGLERY 338


>gi|254460125|ref|ZP_05073541.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacterales
           bacterium HTCC2083]
 gi|206676714|gb|EDZ41201.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 451

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           MK+L++ E N T      + +Y+H PFC + C +C   +         + ++   L E+ 
Sbjct: 39  MKWLTSVEGNET------VSIYIHIPFCKRLCWFCACRTQGTTTLRPVDAYVDILLKEIA 92

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +R +L    ++  +  GGGTP+++ P+ + ++LD +   + ++ + E+++E +P+    
Sbjct: 93  TVRAKLPDGITMGRLHLGGGTPTILSPETMTILLDKVFGAFAITEDFELSVEIDPTEASD 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              Q     G+NR S+GVQ    +    +GR     +    +   RN     ++ DL+Y 
Sbjct: 153 ELLQTLIDFGMNRASIGVQDFAPKVQDAIGRLQTLEQTNDVVKFLRNAGLKAINLDLLYG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP QT   +   L   +S   D L++Y
Sbjct: 213 LPFQTRASFRETLAHVISMDPDRLAIY 239


>gi|50121932|ref|YP_051099.1| coproporphyrinogen III oxidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612458|emb|CAG75908.1| putative coproporphyrinogen oxidase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 437

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 5/284 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLR-DDSTATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +  L       +  DL++ LP QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCGRDRAAVVCDLMFGLPGQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADSGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               E +L+NL   +  D + +G GA   +   ++ +  S+E++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYMMERSLERY 338


>gi|154148980|ref|YP_001407207.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
 gi|153804989|gb|ABS51996.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           hominis ATCC BAA-381]
          Length = 452

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 27/294 (9%)

Query: 7   YENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           Y N +  Q   + L +Y H PFC   C +C  N            ++     EMQ +  +
Sbjct: 35  YVNELKAQAQETPLSLYFHMPFCRSACYFCGCNVIYTSKSEKMHRYLDYMNKEMQILSGI 94

Query: 66  TGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQ 123
               R ++ + FGGGTP+  +   +   +  I K +   + + EI+ E +P  +      
Sbjct: 95  IDTSRVVTQMHFGGGTPTYYDADELDFHIKNIKKYFKNFAKDAEISCEIDPRFLNEEQLD 154

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
              K G NRIS GVQ   E+  + + R         AI LAR      ++ DLIY LP Q
Sbjct: 155 VLVKHGFNRISYGVQDFNEKVQKVIHRVQPYEMTKNAIDLARQKGIKSINTDLIYGLPYQ 214

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           T+  ++  L+ AL+  VD  +++       I+K      M K  +  LPS  V +++   
Sbjct: 215 TLESFKETLRLALTLDVDRFAIFNYAHVPWIKKS-----MRKFDETTLPSPKVKLEILKF 269

Query: 239 TQSITSAHGLHAYEISN--------HSFLGAESLHNLNYWRY-----GDYIGIG 279
           T    +++G     + +        H+ L   +LH  N+  Y      D IGIG
Sbjct: 270 THDFLTSNGYKMIGMDHYSKPTDELHAALENGTLHR-NFQGYTTKGGADLIGIG 322


>gi|32490826|ref|NP_871080.1| hypothetical protein WGLp077 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166032|dbj|BAC24223.1| yggW [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 271

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 18/253 (7%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C+F   V  Y       I++ L +++  +  +  + I+++F GG   ++I   NI  +  
Sbjct: 29  CEFEKLVSFY-------IKNTLNDLEIDKNFSKNKKINTLFIGGNV-NVISENNIKTLFF 80

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL--RFLGRNH 152
           GI        N+E TIE N           Y+K G+NRIS+      +++   + +    
Sbjct: 81  GIKNKLNFKENMEFTIEINTKLDLEKKIFLYKKIGINRISIEKNIFCKKTSISKSINNYI 140

Query: 153 NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKG 212
           N    I +I L  NI   ++ DL +    QT  +    +++     V H + YQ      
Sbjct: 141 NEISKIVSICLRVNI-KNINVDLPFFYEYQTNDEILHNIEKIFLLKVPHQTCYQ---HNC 196

Query: 213 TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRY 272
              +K  K    ++  +     +YN  Q++    G H YEI +++  G E LHNLNY+++
Sbjct: 197 NFIFKNKK----MVEKKTKIKKIYNEIQNLFKFFGFHQYEICSYALPGFECLHNLNYFQF 252

Query: 273 GDYIGIGPGAHSR 285
           GDY GIG G+H +
Sbjct: 253 GDYFGIGCGSHGK 265


>gi|196250672|ref|ZP_03149360.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. G11MC16]
 gi|196209751|gb|EDY04522.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. G11MC16]
          Length = 519

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 21/289 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--S 72
           S+ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R I  +
Sbjct: 192 SHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 251

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + K +     V EIT+EA  P ++        +K  +
Sbjct: 252 TIYYGGGTPTSITAEEMDQLYAHMYKVFPDVDRVREITVEAGRPDTITPEKLDVLKKWQI 311

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 312 DRISINPQSYIQETLKAIGRHHTVEETINKFHLARKMGMNNINMDLIIGLPGEGLREFTH 371

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K +K    V   E +   +    +  TS HG  
Sbjct: 372 TLAETEQLMPESLTVHTLSFKRASEMTK-NKQKYKVADREEIQA-MMKAAEEWTSKHGYV 429

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
            Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 430 PYYLYRQKNILGNLENVGYALPGHESIYNIMIMEEQQSIIGLGCGASSK 478


>gi|70729294|ref|YP_259031.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf-5]
 gi|68343593|gb|AAY91199.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens Pf-5]
          Length = 460

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 17/289 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +YVH PFC   C YC  N  + + +     ++Q    EMQ +     P + + 
Sbjct: 49  KAQRPLSLYVHIPFCANICYYCACNKVITKDRSRALPYLQRLEQEMQLIACHLAPNQRVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + K++ +    + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLNHDELRQLMALLRKHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+    R + R  +  E  A I  AR + F  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSIGLQDLDPAVQRAVNRLQSLDETRAVIEAARTLQFRSINIDLIYGLPKQTPENFAR 228

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAH-- 246
            ++  +S   D LS++           +   +G +L  P+E + + L    + +T+A   
Sbjct: 229 TVEEVISLQPDRLSVFNYAHLPERFMPQRRINGSELPAPAEKLQM-LQRTIEQLTAAGYR 287

Query: 247 --GLHAYEISNHSFLGA--ESLHNLNYWRYG-----DYIGIGPGAHSRV 286
             G+  + + +     A  ES    N+  Y      D IG+G  A S++
Sbjct: 288 YIGMDHFALPDDELAIAQEESTLQRNFQGYTTHGHCDLIGLGVSAISQI 336


>gi|226229254|ref|YP_002763360.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
 gi|226092445|dbj|BAH40890.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
          Length = 483

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 2/195 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           G+    + +YVH PFC  +C YC  N+ V       + ++     E+  + +  G R  +
Sbjct: 51  GRQREPIALYVHLPFCAAQCLYCGCNATVTTRAEIVDRYLSRLRIELDMLARAMGERPRV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + +GGGTP+ +    +A + D +   + + ++ E ++EA+P     +  +  R+ G  
Sbjct: 111 AEMHWGGGTPNFLSDAQLATLHDMLLTTFELGAHTESSLEADPRLTTRSQMRMLRQLGFT 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ L+      +GR    +    A+ LAR   F  ++FDLIY LP QT  ++   
Sbjct: 171 RVSFGVQDLDPVVQEAIGRVQPRAMVQDAVTLAREEGFTGINFDLIYGLPHQTPDRFAAT 230

Query: 191 LQRALSYAVDHLSLY 205
           ++ +L+   D ++ +
Sbjct: 231 VEDSLAMRPDRIACF 245


>gi|169825978|ref|YP_001696136.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41]
 gi|168990466|gb|ACA38006.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Lysinibacillus
           sphaericus C3-41]
          Length = 501

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 27/295 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQEN-FIQSFLTEM----QWMRQLT 66
           Q    + VY+  PFC  KC YC F ++      K G+ N F+     E+    +W++   
Sbjct: 169 QIGQEISVYIGIPFCPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLK--N 226

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQG 124
               I+SI++GGGTP+ IE   +  +   + +++     + EIT+EA  P ++     + 
Sbjct: 227 NNMKITSIYWGGGTPTSIEADEMDALYQTMYESFPNPETIREITVEAGRPDTITPEKLEV 286

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            +K G++RIS+  QS  +++L+ +GR+H   E I    LAR      ++ DLI  LP + 
Sbjct: 287 LKKWGIDRISVNPQSYTDETLKAIGRHHTVQETIDKFWLARESGMNNINMDLIIGLPNEG 346

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +++  L  +     + L+++ L+ ++ +   + +KD   V   + VA ++  + Q  T
Sbjct: 347 IEEFQHSLVESAKMQPESLTVHTLSFKRASEMTR-NKDKYKVADRDTVA-EMMQMAQDWT 404

Query: 244 SAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSR 285
             +    Y            E   +S  G ES++N+        I G+G GA S+
Sbjct: 405 KENDYVPYYLYRQKNILGNLENVGYSKAGEESIYNIVIMEEVQTILGVGCGASSK 459


>gi|126649445|ref|ZP_01721686.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
 gi|126593770|gb|EAZ87693.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
          Length = 501

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 27/295 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQEN-FIQSFLTEM----QWMRQLT 66
           Q    + VY+  PFC  KC YC F ++      K G+ N F+     E+    +W++   
Sbjct: 169 QIGQEISVYIGIPFCPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKD-- 226

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQG 124
               I+SI++GGGTP+ IE   +  +   + +++     + E+T+EA  P ++     + 
Sbjct: 227 NNMKITSIYWGGGTPTSIEADEMDALYQTMYESFPNPETIREVTVEAGRPDTITPEKLEV 286

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            +K G++RIS+  QS  +++L+ +GR+H   E I    LAR      ++ DLI  LP + 
Sbjct: 287 LKKWGIDRISVNPQSYTDETLKAIGRHHTVQETIDKFWLARESGMNNINMDLIIGLPNEG 346

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +++  L  +     + L+++ L+ ++ +   + +KD   V   + VA ++  + Q  T
Sbjct: 347 IEEFQHSLVESAKMQPESLTVHTLSFKRASEMTR-NKDKYKVADRDTVA-EMMQMAQDWT 404

Query: 244 SAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSR 285
             +    Y            E   +S  G ES++N+        I GIG GA S+
Sbjct: 405 KENDYVPYYLYRQKNILGNLENVGYSKAGEESIYNIVIMEEVQTILGIGCGASSK 459


>gi|294506737|ref|YP_003570795.1| oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
 gi|294343065|emb|CBH23843.1| oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
          Length = 460

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
           T      L +Y+H PFC + C YC  +  V         +++    E+  +   L+  R 
Sbjct: 45  TAAPEAPLSLYLHLPFCRQLCYYCGCHMKVTHDPARIAKYLRYLKREIDLLAPMLSSDRP 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ + +GGGTP+L+ P+ I  + + I   + ++ + E++IEA+P  +  ++    R+ G+
Sbjct: 105 VTQVHWGGGTPTLLSPEQIRELGEHIRDRFRMAPDAEMSIEADPRGLTEDHIAAAREIGM 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQS +      + R         A+  AR+     ++ DL+Y LP QT      
Sbjct: 165 NRLSLGVQSFDPTVQEAINRVQPERLTRTAVQWARDHGIESVNLDLVYGLPHQTPDTMAD 224

Query: 190 ELQRALSYAVDHLSLY 205
            L   +  A D ++LY
Sbjct: 225 TLGGVVDLAPDRIALY 240


>gi|224372610|ref|YP_002606982.1| coproporphyrinogen III oxidase [Nautilia profundicola AmH]
 gi|223589420|gb|ACM93156.1| oxygen-independent coproporphyrinogen III oxidase [Nautilia
           profundicola AmH]
          Length = 454

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 152/362 (41%), Gaps = 32/362 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +    L +Y H PFC   C +C  N         +  +I+    E++ + + L   R + 
Sbjct: 43  KSDKPLSLYFHLPFCKSACYFCGCNVIYTSKADKRTKYIEYLEKELETLSKHLDTSRVVR 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P+ +A +   I K++     + EI++E +P      +    ++ GVN
Sbjct: 103 QVHFGGGTPTFFTPEELAEVYALIKKHFKNYEKDAEISVEIDPRFFSREHMDVMKEFGVN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ   E++ + + R         A+ +AR      ++ DLIY LP Q++  ++  
Sbjct: 163 RISFGVQDFNEETQKAVNRIQPFDLTKEAVDIAREAGINSINIDLIYGLPYQSLETFKKT 222

Query: 191 LQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           L   L    D L+++       ++KG     M K  +  LPS    + ++         +
Sbjct: 223 LDLVLKLNPDRLAVFNYAHVPWMKKG-----MRKIDETTLPSPEEKLKIFKYVIDFFENN 277

Query: 247 GL------HAYEISNHSFLGAES--LHNLNYWRY-----GDYIGIGPGAHSRVKVG-SHR 292
           G       H  +  +  F   E   LH  N+  Y      D IG+G  +     +G +  
Sbjct: 278 GYIMVGMDHFAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGVGLTS-----IGETED 331

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
           V +   K  +++ K V +    V     LS E +  ++++M +       +K +E   G 
Sbjct: 332 VYMQNYKDLKNYEKAVDEGKIPVFRGVILSEEDKIRKYIIMEMMANFSFDIKRFENKFGI 391

Query: 353 NL 354
           N 
Sbjct: 392 NF 393


>gi|238922251|ref|YP_002935765.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
 gi|238873923|gb|ACR73631.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
          Length = 471

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 104/196 (53%), Gaps = 3/196 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+  PFC   C YC F+S+ +  YK   +N++ + + E++++ +    R + +++ GGG
Sbjct: 146 LYIGIPFCPSICLYCSFSSYALGAYKDYVDNYVDALIKEIRFVAETMKGRRLDTVYMGGG 205

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  +L  + + + +S   E+T+EA  P SV  + F+  +   V RIS+  Q
Sbjct: 206 TPTTLSAAQLDKVLTVVEEAFDLSRCRELTVEAGRPDSVTPDKFKVLKAHNVGRISINPQ 265

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +++L  +GR H   +   A  +AR      ++ D+I  LP + + +    L    + 
Sbjct: 266 TMNQKTLDLIGRKHTVEDIKNAYAMAREAGLDNINMDMILGLPGEGVDEVYHTLNEIKAM 325

Query: 198 AVDHLSLYQLTIEKGT 213
             + L+++ L I++ +
Sbjct: 326 RPESLTVHSLAIKRAS 341


>gi|254524933|ref|ZP_05136988.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           sp. SKA14]
 gi|219722524|gb|EED41049.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           sp. SKA14]
          Length = 469

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 6/257 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q + +L +YVH PFC   C YC  N  + R +    +++   L E   +  Q    R 
Sbjct: 55  SNQLARALSLYVHVPFCSSPCFYCGCNRVITRDRGRGHSYVSRVLAEADLLAPQFEDGRE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++ + +  +++G+ +  +++ S   + +IE +P  ++ ++     + 
Sbjct: 115 VIQLHLGGGTPNFLDAEAMTTLVEGLRRRFDFSDSPQRDFSIELDPRFIDTHDVAMLARL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQW 187
           G NR SLGVQ  +      + R     + +  +   R+   R ++ DLIY LP Q++  +
Sbjct: 175 GFNRASLGVQDFDPHVQESINRIQGVQQTLDILQACRDSGMRSVNVDLIYGLPGQSLEGF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+R L+   D L++Y        LF    +  +  LPS    + L  L+    SA G
Sbjct: 235 GRTLERVLALRPDRLAVYGYA-HLPHLFRAQKQIDERRLPSPEDKLALLGLSVEKLSAAG 293

Query: 248 LHAYEISNHSFLGAESL 264
            + Y   +H  L  E L
Sbjct: 294 -YQYIGMDHFALPEEDL 309


>gi|188588125|ref|YP_001920363.1| coproporphyrinogen III oxidase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498406|gb|ACD51542.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 473

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 133/280 (47%), Gaps = 22/280 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E     +  + + +Y+   FC  KC YC F S+     VG +  ++ +L  +  ++++ G
Sbjct: 136 EEKFVNKKQDKISIYIGMAFCPTKCLYCSFTSNSI---VGNKKMVEPYLDAL--IKEIKG 190

Query: 68  PRS--------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSV 117
             S        I +++FGGGTP+ +  Q    ++  I   +    NV E T+E   P ++
Sbjct: 191 ISSYVKEKNLEIETVYFGGGTPTSVNDQQFKSVMTQIYNGFIKEKNVKEFTVECGRPDTI 250

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
            ++  Q  +   V RIS+  Q++ +++L  +GR H   +      +AR + F  ++ D+I
Sbjct: 251 TLDKLQTMKAYDVTRISINPQTMNDETLNLIGRKHTVDDIKEKFKMARELEFDDINMDII 310

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVD 234
             LP +   +        +    D ++++ L +++G++ Y+  + K G L +P +   + 
Sbjct: 311 IGLPGEGHEELIKTRDELIKLNPDSITVHGLCLKRGSIMYENFILKKG-LDIPRQEEIIK 369

Query: 235 LYNLTQSITSAHGLHAYEI-SNHSFLGAESLHNLNYWRYG 273
           +Y  ++++     +  Y +    + +G  ++ N+ Y + G
Sbjct: 370 MYEESRNLAKHLNISPYYMYRQKNMIG--NMENVGYAKKG 407


>gi|138894227|ref|YP_001124680.1| coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
           NG80-2]
 gi|134265740|gb|ABO65935.1| Coproporphyrinogen oxidase, anaerobic [Geobacillus
           thermodenitrificans NG80-2]
          Length = 501

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 21/289 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--S 72
           S+ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R I  +
Sbjct: 174 SHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + K +     V EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSITAEEMDQLYAHMYKVFPDVDRVREITVEAGRPDTITPEKLDVLKKWQI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 294 DRISINPQSYIQETLKAIGRHHTVEETINKFHLARKMGMNNINMDLIIGLPGEGLREFTH 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K +K    V   E +   +    +  TS HG  
Sbjct: 354 TLAETEQLMPESLTVHTLSFKRASEMTK-NKQKYKVADREEIQA-MMKAAEEWTSKHGYV 411

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
            Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 412 PYYLYRQKNILGNLENVGYALPGHESIYNIMIMEEQQSIIGLGCGASSK 460


>gi|27350261|dbj|BAC47272.1| coproporphyrinogen III dehydrogenase [Bradyrhizobium japonicum USDA
           110]
          Length = 423

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI 74
           + + +Y+H PFC   C YC F + + R +     ++ +   E++ + +   PR+  +S +
Sbjct: 24  DPVSLYIHVPFCRAICWYCGFPTSLTRSERPIRKYLATLHAEIRLVAE-QAPRALPVSDV 82

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+ I P +   ++  + + +  S +  I IE +P +      +  + AGVNR S
Sbjct: 83  HFGGGTPTTIAPADFLALMALLRRCFAFSKSATIAIEIDPRAFTAEMVETLQVAGVNRAS 142

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS +    R + R  +  +  + +  L ++   R++FDL++ LP QT+       + 
Sbjct: 143 IGVQSFDGVVQRSVNRVQSEVQTASVVESLRQHGISRINFDLLFGLPHQTVRSCVDSTRT 202

Query: 194 ALSYAVDHLSLY 205
           AL+   D L+++
Sbjct: 203 ALAMRPDRLAVF 214


>gi|34558058|ref|NP_907873.1| coproporphyrinogen III oxidase [Wolinella succinogenes DSM 1740]
 gi|34483776|emb|CAE10773.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE [Wolinella
           succinogenes]
          Length = 455

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 3/193 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           + +L +Y+H PFC   C +C  N      +  +E +I     E+  +++ +   R ++ +
Sbjct: 45  AKALSLYIHLPFCRSACYFCGCNVIYTSKEDKKERYIGYLKKELALLKEAMDTHREVTQL 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            FGGGTP+ ++   +A ILD + + +   S + E++ E +P        Q  ++ G+NR+
Sbjct: 105 HFGGGTPTFMDASQLAEILDLLHETFPRFSDDAELSCEIDPRFFTQEQMQALKRGGINRL 164

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ         + R  +      A+ +AR +    ++FDLIY LP Q    +   L+
Sbjct: 165 SFGVQDFNPGVQEAIHRTQSVELVARAVEMARAHGINSINFDLIYGLPYQDFESFAKTLE 224

Query: 193 RALSYAVDHLSLY 205
             +  + D L+++
Sbjct: 225 EVVKLSPDRLAVF 237


>gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
 gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
          Length = 460

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 17/289 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +    L +YVH PFC   C YC  N  + + +     +++    E++ + R +   + I 
Sbjct: 49  KAGRPLSLYVHIPFCAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + +++ +    + + +IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRRLMQHLRQHFNLLDDDSGDYSIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+ +  R + R     E  A +  AR + F  ++ DLIY LPKQT  ++  
Sbjct: 169 NRVSLGVQDLDPEVQRAVNRLQTLEETRAIVEAARTLQFRSVNIDLIYGLPKQTPERFAR 228

Query: 190 ELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-- 246
            +   ++   D LSL+    + +  +  +     DL  P++ +A+ L N  + +T A   
Sbjct: 229 TVAEVIALQPDRLSLFNYAHLPERFMPQRRISADDLPSPADKLAM-LQNSIEQLTRAGYR 287

Query: 247 --GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
             G+  + + +     A+    L      Y  +G  D IG+G  A S++
Sbjct: 288 YIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAISQI 336


>gi|83815617|ref|YP_444883.1| coproporphyrinogen III oxidase [Salinibacter ruber DSM 13855]
 gi|83757011|gb|ABC45124.1| oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber DSM 13855]
          Length = 460

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
           T      L +Y+H PFC + C YC  +  V         +++    E+  +   L+  R 
Sbjct: 45  TAAPEAPLSLYLHLPFCRQLCYYCGCHMKVTHDPARIAKYLRYLKREIDLLAPMLSSDRP 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ + +GGGTP+L+ P+ I  + + +   + ++ + E++IEA+P  +  ++    R+ G+
Sbjct: 105 VTQVHWGGGTPTLLSPEQIRELGEHLRDRFRMAPDAEMSIEADPRGLTEDHIAAAREIGM 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQS +      + R         A+  AR+     ++ DL+Y LP QT      
Sbjct: 165 NRLSLGVQSFDPTVQEAINRVQPERLTRTAVQWARDYGIESVNLDLVYGLPHQTPDTMAD 224

Query: 190 ELQRALSYAVDHLSLY 205
            L   +  A D ++LY
Sbjct: 225 TLGGVVDLAPDRIALY 240


>gi|195541932|gb|ACF98132.1| putative coproporphyrinogen III oxidase [uncultured bacterium 1062]
          Length = 449

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
            +L +YVH PFC + C +C  ++  V RY      ++     EM+ + +L G R  + ++
Sbjct: 45  TALSLYVHIPFCDRLCWFCGCHTKQVLRYDP-IAAYLPGVFREMETVAELLGGRGHVVAL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGG+PS++ P +++ +   + + + V +++E +IE +P+ +  + +  +  AGV RIS
Sbjct: 104 HLGGGSPSMLRPDDLSDLSARVRRQFRVGADLEFSIEIDPNDMTDDRYDAFADAGVTRIS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ    +    + R     +  A +   R      ++ D++Y LP QT+   E  + +
Sbjct: 164 VGVQDFNPKVQEAINRIQTFEQTKAVVDGMRLRGVKSVNLDVLYGLPHQTVASVEATVDQ 223

Query: 194 ALSYAVDHLSLY 205
           ALS   D ++L+
Sbjct: 224 ALSMNPDRIALF 235


>gi|329903145|ref|ZP_08273385.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548479|gb|EGF33150.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 471

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 5/240 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A     T  G   L +Y+H PFC   C YC  N  V +       ++     E++  
Sbjct: 48  YLQAVAGLRTRGGRKPLSLYLHIPFCDTVCYYCACNKIVTKKVEKAATYLTYLKREIEMQ 107

Query: 63  RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEV 119
            QL    + +  +  GGGTP+      +  ++  + + + ++ +   E +IE +P +V  
Sbjct: 108 GQLFADMNLVEQVHLGGGTPTYFSDAQMGELMAHVRRWFKLAPDDVGEYSIEVDPRTVSR 167

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 R  G NRISLGVQ  + +  + + R    SE +A I  AR+  F  +S DLIY 
Sbjct: 168 ERVFTLRGQGFNRISLGVQDFDPEVQKAVNRIQPESETLAIIQAARDANFRSVSIDLIYG 227

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQ +      L + ++   D +++Y        +F    +  D  LP+    +D+  L
Sbjct: 228 LPKQNVMTMAQTLAKVIAANPDRIAIYNYA-HLPHVFKPQRRISDTDLPAGETKLDMLAL 286


>gi|121593507|ref|YP_985403.1| coproporphyrinogen III oxidase [Acidovorax sp. JS42]
 gi|222110222|ref|YP_002552486.1| coproporphyrinogen iii oxidase [Acidovorax ebreus TPSY]
 gi|120605587|gb|ABM41327.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax sp.
           JS42]
 gi|221729666|gb|ACM32486.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           ebreus TPSY]
          Length = 460

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)

Query: 2   KYLSAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  + +  L +YVH PFC   C YC  N  + R+    E +++    E+
Sbjct: 36  EYILALQQRRVGSVAKAMPLSLYVHIPFCESLCYYCACNKIITRHPERAEVYLRYLSREI 95

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                  G  + +S + FGGGTP+ +    +  ++  + +++ +    E +IE +P +V+
Sbjct: 96  DLHTAHCGVGQHVSQLHFGGGTPTFLTDDGLRELMGMLRRSFVLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                   + G NR+S GVQ  + +  + + R   A +  A +  AR + F  ++ DLIY
Sbjct: 156 EARLGLLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEKVFALVDAARKLGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LP+QT   ++  L++      D ++LY
Sbjct: 216 GLPRQTPESFDRTLEQVAELRPDRIALY 243


>gi|262038085|ref|ZP_06011490.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Leptotrichia
           goodfellowii F0264]
 gi|261747905|gb|EEY35339.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Leptotrichia
           goodfellowii F0264]
          Length = 414

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 8/205 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFG 77
            +YVH P+C K C +C+ N   ++     E++    + E +   +    +S  + + FFG
Sbjct: 46  AMYVHIPYCDKICSFCNLNR--KQLDNDLEDYTDFLIKEFEKYGKTDYMKSKKLDAAFFG 103

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++    I  IL  I +N+  + + E T E+   ++     +  +K GVNR+S+G+
Sbjct: 104 GGTPTILREHQIEKILKCIKQNYNFTEDYEFTFESTLHNLNDKKLEILQKNGVNRLSIGI 163

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRALS 196
           QS   +    L R +   E +  +   ++ F  +   D+IY  P++T+ +   +      
Sbjct: 164 QSFSPKGRDTLNRTYTKEETVKRLKKVKDNFDGLVCIDIIYNYPEETVEEATEDADIIAD 223

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD 221
             +D  S Y L I  G+   KM KD
Sbjct: 224 LKLDSSSFYSLIIFDGS---KMSKD 245


>gi|241760523|ref|ZP_04758616.1| coproporphyrinogen dehydrogenase [Neisseria flavescens SK114]
 gi|241319027|gb|EER55529.1| coproporphyrinogen dehydrogenase [Neisseria flavescens SK114]
          Length = 606

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQL-TGPRSISSIFFGG 78
            Y+H PFC   C +C F  +   +K  Q + +    + EM    ++ T    I +++FGG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNA--WKDSQSSVYTDKIIEEMAAEAEVRTDKGKIRAVYFGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  +++  ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GVQ
Sbjct: 113 GTPTALLTEDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLEKAQACIEAGANRISIGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +      R LGR H+  EA   +     +   +  DL++ LP QT   W+ ++ RA    
Sbjct: 173 TFNTAIRRRLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDDVWQNDIARAAELP 232

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  L  Y   +       +M + G    P   ++  D Y  T       G    ++SN  
Sbjct: 233 LSGLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWE--QVSNSH 290

Query: 258 F 258
           F
Sbjct: 291 F 291


>gi|114321504|ref|YP_743187.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227898|gb|ABI57697.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 466

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 3/193 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C +   V   +     ++ +   E++W+ + T    ++  F GGGT
Sbjct: 65  LYAHVPFCNYACSFCCYAKKVGVEREQMARYVATLKRELEWIPEGT---PVNQFFIGGGT 121

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +L  IA       +   T+EA+P S+   +    ++ GV R+S+GVQSL
Sbjct: 122 PTALPADLLDELLGAIAGRMPYHGDPVHTVEASPESISDAHLAVLQRHGVRRVSMGVQSL 181

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +++ L  + R+H    A+       +    ++ DLIY LP QT   +  + QR     V 
Sbjct: 182 DDEVLDSVRRSHGPDLALETCRRIIDAGLILNIDLIYGLPGQTHAGFRRDFQRVADAGVH 241

Query: 201 HLSLYQLTIEKGT 213
            ++ Y L + + T
Sbjct: 242 AVTAYNLRLNERT 254


>gi|317056337|ref|YP_004104804.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
 gi|315448606|gb|ADU22170.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
          Length = 489

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 9/212 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SI 71
            S  +YV  PFC  +C YC F S       G++    +I     E++    +T      +
Sbjct: 164 KSFSLYVSIPFCPTRCSYCSFISQT--LDSGRKLIPEYIDKMCREIRHTALITKRLGLKL 221

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++FGGGTP+ IE   +A ++  I  ++ +SS  E T+EA  P ++     +  +  G 
Sbjct: 222 DTVYFGGGTPTSIEASQLAALMKCIEHSFDMSSVREYTVEAGRPDTITEEKLRTIKANGC 281

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            RIS+  QSL    L  +GR+H+  +   +  LAR I F  ++ D+I  LP+ T+  +  
Sbjct: 282 TRISINPQSLNPDVLEAIGRSHSVDQFYDSYDLARKIGFSCINTDVIAGLPEDTVESFAD 341

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            + + L  + ++ +++ L+I++  L  +  K+
Sbjct: 342 TIDKLLGLSPENFTVHTLSIKRAALLNQGDKE 373


>gi|325526304|gb|EGD03915.1| coproporphyrinogen III oxidase [Burkholderia sp. TJI49]
          Length = 463

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R +
Sbjct: 51  GASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMALQAALFDPARPV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V        R  G
Sbjct: 111 TQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEFSIEIDPRTVTPATLVHLRTIG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R    +     +  AR   F  +S DLIY LP QT++ + 
Sbjct: 171 FNRLSLGVQDFDPVVQRAINRIQPLAMTADLLAAARATGFHSVSVDLIYGLPHQTVSVFA 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LP     + L  L   + ++ G
Sbjct: 231 RTLETIIELAPDRLSVFGYA-HMPQLFKMQRQIDDATLPPPETRIALLGLAIEMLTSAG 288


>gi|253581885|ref|ZP_04859109.1| iron-sulfur dehydrogenase [Fusobacterium varium ATCC 27725]
 gi|251836234|gb|EES64771.1| iron-sulfur dehydrogenase [Fusobacterium varium ATCC 27725]
          Length = 472

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 11/211 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SI 71
           + +Y+  PFC  KC YC F S+     V RY  G   F+++ L E++   +        I
Sbjct: 144 INLYIGIPFCPTKCKYCSFASYEISGGVGRYYKG---FVETLLKEIEMAGKFLKDEGYKI 200

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            SI+ GGGTPS +   ++  +L  I +N  +S   E T EA    S+     +  +K G 
Sbjct: 201 ESIYIGGGTPSTLTEDDLEKVLKKINENIDMSYLKEFTFEAGREDSLTEKKLELVKKYGA 260

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +RISL  Q+  E +L+ + RN N         +A+ +   ++ DLI  LP +        
Sbjct: 261 DRISLNPQTFNENTLKKVNRNFNRENFDRYFRIAKEMNFIINMDLIIGLPDENTEDVLYT 320

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           L     Y +++L+++ L  ++ +  +K  K+
Sbjct: 321 LNELEKYDIENLTIHSLAFKRASKLFKEDKN 351


>gi|297519250|ref|ZP_06937636.1| coproporphyrinogen III oxidase [Escherichia coli OP50]
          Length = 374

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 2/184 (1%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 16  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 75

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 76  LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 135

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 136 PESFAFTLKRVAELNPDRLSVFNYA-HLPTIFAAQRKIKDADLPSPQQKLDILQETIAFL 194

Query: 244 SAHG 247
           +  G
Sbjct: 195 TQSG 198


>gi|255008667|ref|ZP_05280793.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313146401|ref|ZP_07808594.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313135168|gb|EFR52528.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
          Length = 426

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 168/399 (42%), Gaps = 43/399 (10%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           +E  + GQ S    +Y H PFC  KC YC+  S           ++++   + + +    
Sbjct: 36  FERLVGGQAS----LYFHIPFCAHKCGYCNLFSQQSCDGGRISAYLRTMRRQAEQLSVAA 91

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGY 125
                +S   GGGTP ++  + +  +   IA+ + V  S V  +IE +P   +    Q  
Sbjct: 92  QDLKFTSFAVGGGTPLILNEKQLDELF-CIAELFGVRPSEVFTSIETSPEYADKKVLQQL 150

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  GV R+S+GVQS  +  L+ L R    +  I A+   R   FP+++ DLIY +  QT+
Sbjct: 151 RTRGVERLSMGVQSFNDAELKKLKRRPVLATVIDALQNIREADFPQLNLDLIYGIEGQTV 210

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L  AL+Y  D L +Y L +  GT           V  ++++   +Y   + +  
Sbjct: 211 DSFIHSLTTALTYRPDELFIYPLYVRPGTRI--------DVRSTDDMCYAIYRSARELLV 262

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-----------HRV 293
             G    + S   F+  +++     +  GD   +  G+  R  +G              +
Sbjct: 263 EQGF--VQTSMRRFVKRKTVE--LEFSCGDETMLSCGSGGRSYLGDLHYATPYAVRQEAI 318

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           A  I+++  +   +   NG+       LS+E+    F++  L    G+   ++E   G+ 
Sbjct: 319 AGEIDRYIRTADFLTVTNGY------LLSAEEVQIRFIIKNLMYYRGLDTAEYERRFGKE 372

Query: 354 LDIECERNLQRQGFIE---RVQFSRLRCTQRGMTMLDSV 389
            D    R    +G+IE   RV    L  T+ GM   D +
Sbjct: 373 PDRTLFREFTDRGWIEEKNRV----LLLTEEGMAYSDYI 407


>gi|161511107|ref|NP_768647.2| coproporphyrinogen III oxidase [Bradyrhizobium japonicum USDA 110]
 gi|8778188|gb|AAF79211.1|AF276709_1 coproporphyrinogen III dehydrogenase [Bradyrhizobium japonicum]
 gi|12620703|gb|AAG60979.1|AF322013_98 HemN1 [Bradyrhizobium japonicum]
          Length = 445

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI 74
           + + +Y+H PFC   C YC F + + R +     ++ +   E++ + +   PR+  +S +
Sbjct: 46  DPVSLYIHVPFCRAICWYCGFPTSLTRSERPIRKYLATLHAEIRLVAE-QAPRALPVSDV 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+ I P +   ++  + + +  S +  I IE +P +      +  + AGVNR S
Sbjct: 105 HFGGGTPTTIAPADFLALMALLRRCFAFSKSATIAIEIDPRAFTAEMVETLQVAGVNRAS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS +    R + R  +  +  + +  L ++   R++FDL++ LP QT+       + 
Sbjct: 165 IGVQSFDGVVQRSVNRVQSEVQTASVVESLRQHGISRINFDLLFGLPHQTVRSCVDSTRT 224

Query: 194 ALSYAVDHLSLY 205
           AL+   D L+++
Sbjct: 225 ALAMRPDRLAVF 236


>gi|15834746|ref|NP_296505.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270284913|ref|ZP_06194307.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270288940|ref|ZP_06195242.1| coproporphyrinogen III oxidase [Chlamydia muridarum Weiss]
 gi|7190157|gb|AAF39000.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydia
           muridarum Nigg]
          Length = 457

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y H PFC   C YC  +  + R +   +++I+S + EM+    L  G + +S I FG
Sbjct: 49  LSLYFHIPFCQSMCLYCGCSVVLNRKEEIVDHYIESLIQEMRLTFSLLGGKKPVSRIHFG 108

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISL 135
           GGTPS +       +   I + + +S+  E+ IE +P S+  + +     +  G NR+SL
Sbjct: 109 GGTPSRLSRAQFTHLFTHIHQFFDLSNIEELAIEFDPRSLREDADKPLFLQNLGFNRVSL 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  + +    + R  +  E++ A    R++ F  ++ DLIY LPKQT + ++  +Q  
Sbjct: 169 GIQDTQWEVQEAVRRRQSYEESLLAYKQFRDLNFTGINIDLIYGLPKQTQSSFKQTIQHI 228

Query: 195 LSYAVDHLSLY 205
           L    D L+L+
Sbjct: 229 LDMRPDRLALF 239


>gi|305665397|ref|YP_003861684.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
 gi|88710152|gb|EAR02384.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
          Length = 462

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFG 77
           + +Y+H PFC   C +C  +  + +    +  +I S L E +    L G + I   +  G
Sbjct: 60  ISIYIHLPFCESLCTFCGCHKRITKQHTVETPYIDSLLKEWKLYCNLFGSKPIIKELHLG 119

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P+N+ +++DGI +    S   E + E +P++    + Q     G  R+S GV
Sbjct: 120 GGTPTFFSPENLKMLIDGIFRLAERSREYEFSFEGHPNNTTKEHLQTLYDVGFRRVSYGV 179

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   E+  + + R             AR I +  +  D+I+ LP QT+   E  + +  +
Sbjct: 180 QDYNEKVQKSIHRVQPFENVKKVTQAAREIGYESIGHDIIFGLPHQTLEHVEETILKTKA 239

Query: 197 YAVDHLSLY 205
              D L+ Y
Sbjct: 240 LMPDRLAFY 248


>gi|289450473|ref|YP_003475007.1| coproporphyrinogen dehydrogenase HemZ [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289185020|gb|ADC91445.1| coproporphyrinogen dehydrogenase HemZ [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 552

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 7/202 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISS 73
           ++ GVY+  PFC  +C YC F+++         + I  ++  +    +LT    P  IS+
Sbjct: 218 DTCGVYIAIPFCPTRCLYCSFSTN--EGIDPPNDLINRYIDALSEEIELTFAQLPFKIST 275

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP ++  + IA +   I +N       E+T EA  P  V+        +AG  +
Sbjct: 276 LYVGGGTPGILSAEQIARLGQIIHRNIEFIPGAELTFEAGRPDRVDQPALSAVYEAGFQK 335

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           I L  Q+  +++L  + R H   + I+   +AR + F  ++ DLI  LP +T       L
Sbjct: 336 ICLNPQTFHDRTLALVNRQHTVEQLISTYEMARRMPFTNINMDLILGLPGETEADMRYTL 395

Query: 192 QRALSYAVDHLSLYQLTIEKGT 213
           ++  S A D  +L+ L I++ +
Sbjct: 396 KKLESLAPDSFTLHSLAIKRAS 417


>gi|154175206|ref|YP_001409042.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           curvus 525.92]
 gi|112804027|gb|EAU01371.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           curvus 525.92]
          Length = 406

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 9/199 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           +Y H PFC   C +C  N    R K+  E  ++ Q  L E+    + +    +S  S++F
Sbjct: 41  IYFHVPFCDTICSFCSMN----RSKLDGELDDYTQYLLGEIDKYSKFSYIQQKSFESVYF 96

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ ++ +++  IL  I + + +S   E + E    ++ ++  +  +  GVNR S+G
Sbjct: 97  GGGTPTTLKERHLEKILKAINEKFNISKTCEFSFETTLHNLNISKVRLMQSLGVNRFSIG 156

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+  E   + L R H+   AI  +   ++ F   +  D+IY  P +T  +   + +   
Sbjct: 157 VQTFSEAGRKLLNRTHSKEAAIEHLKKIKDEFKGFVCTDIIYNYPNETEEEVREDARILK 216

Query: 196 SYAVDHLSLYQLTIEKGTL 214
             AVD  S Y L    G++
Sbjct: 217 DIAVDSTSFYSLQFLDGSV 235


>gi|241763106|ref|ZP_04761166.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
 gi|241367731|gb|EER61985.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
          Length = 460

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           T   +  L +YVH PFC   C YC  N  + ++    + +++    E+       G  ++
Sbjct: 48  TAATALPLSLYVHIPFCESLCYYCACNKIITKHHDRADVYLRYLSREIDLHTAHCGTGQT 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S +  GGGTP+ +    +  ++  + +++T +   E +IE +P +V         + G 
Sbjct: 108 VSQLHLGGGTPTFLSDDGLRQLMAMLRRSFTFAPGGEYSIEVDPRTVSAERLAVLAELGF 167

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ  + +  + + R   A +  A +  AR++ F  ++ DLIY LP+QT   ++ 
Sbjct: 168 NRLSFGVQDFDAEVQKAVHRIQPAEQVFALVEAARSLGFESVNVDLIYGLPRQTPESFDR 227

Query: 190 ELQRALSYAVDHLSLY 205
            L + +    D ++LY
Sbjct: 228 TLAQVVQLRPDRIALY 243


>gi|163753531|ref|ZP_02160655.1| O2-independent coproporphyrinogen III oxidase [Kordia algicida
           OT-1]
 gi|161327263|gb|EDP98588.1| O2-independent coproporphyrinogen III oxidase [Kordia algicida
           OT-1]
          Length = 444

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           +  + +Y+H PFC   C +C  N  + +    ++ +I + L E    R+L G R  I  I
Sbjct: 39  AEGISLYLHLPFCESLCTFCGCNKRITKRHEVEKPYINALLKEWALYRELFGARPKIKEI 98

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+++  +++G+ ++ T++ N E + E +P++    + Q     G  R+ 
Sbjct: 99  HLGGGTPTFFSPEHLRELIEGLLQSATLADNYEFSFEGHPNNTTEAHLQTLYDVGFRRVC 158

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   E   + + R            LAR I +  +  D+I+ LP QT    +  +++
Sbjct: 159 FGVQDYNETVQKAIHRIQPFENVKRVTELARKIGYTSVGHDIIFGLPFQTTEHVKETIEK 218

Query: 194 ALSYAVDHLSLY 205
               + D ++ Y
Sbjct: 219 TKLLSPDRIAFY 230


>gi|299537591|ref|ZP_07050884.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
 gi|298726960|gb|EFI67542.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
          Length = 501

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 143/294 (48%), Gaps = 35/294 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLT-------EM-QWMRQLTG 67
           + VY+  PFC  KC YC F +    Y +G   ++  + +FL        EM +W++    
Sbjct: 174 ISVYIGIPFCPTKCAYCTFPA----YAIGSNRKQGRVTTFLDGLHIELREMGKWLKD--N 227

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGY 125
              I+SI++GGGTP+ IE   +  +   + +++     + E+T+EA  P ++     +  
Sbjct: 228 NMKITSIYWGGGTPTSIEADEMDALYQTMYESFPNPETIREVTVEAGRPDTITPEKLEVL 287

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           +K G++RIS+  QS  +++L+ +GR+H   E I    LAR      ++ DLI  LP + +
Sbjct: 288 KKWGIDRISVNPQSYTDETLKAIGRHHTVQETIDKFWLARESGMNNINMDLIIGLPNEGI 347

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +++  L+ +     + L+++ L+ ++ +   + +KD   V   + VA ++  + Q  T 
Sbjct: 348 EEFQHSLEESAKMQPESLTVHTLSFKRASEMTR-NKDKYKVADRDTVA-EMMEMAQIWTK 405

Query: 245 AHGLHAY------------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSR 285
            +    Y            E   +S  G ES++N+        I GIG GA S+
Sbjct: 406 ENDYVPYYLYRQKNILGNLENVGYSKAGEESIYNIVIMEEVQTILGIGCGASSK 459


>gi|238796096|ref|ZP_04639607.1| Coproporphyrinogen III oxidase [Yersinia mollaretii ATCC 43969]
 gi|238720041|gb|EEQ11846.1| Coproporphyrinogen III oxidase [Yersinia mollaretii ATCC 43969]
          Length = 437

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 5/266 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  + +     +    L E  M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQPE-STARYTDYLLRELSMEAHSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + +   ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHRIIGELRQTLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKADRDQAIRFLTDLAARDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRIALPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGA 282
               E +L+NL   +  D + +G GA
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGA 320


>gi|260425348|ref|ZP_05779328.1| oxygen-independent coproporphyrinogen III oxidase [Citreicella sp.
           SE45]
 gi|260423288|gb|EEX16538.1| oxygen-independent coproporphyrinogen III oxidase [Citreicella sp.
           SE45]
          Length = 451

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 156/348 (44%), Gaps = 21/348 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SS 73
           + ++ +Y+H PFC + C +C   +         + ++ + ++E++ ++    PR +  S 
Sbjct: 48  NGTISLYLHVPFCRRLCWFCACRTQGTSTLSPVQAYVDTLVSELEMLKARL-PRGVKLSR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+L+ P  +  ++D +      + + E ++E +P+ ++          G+NR 
Sbjct: 107 LHWGGGTPTLLTPDLMKRLVDKVRDVADFTDHAEFSVEIDPNEIDGERLDVLAAGGMNRA 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +EQ  + +GR        AA+ + R      ++ D++Y LP Q+  +    +Q
Sbjct: 167 SIGVQDFDEQIQQTIGRPQGYDVTRAAVEMIRERGVASLNADILYGLPHQSRARITETVQ 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-----TSAHG 247
           + LS+A D ++LY           +     D  LP+    +DL++  + +      +  G
Sbjct: 227 KLLSFAPDRVALYGYAHVPWMAKRQQMIPSD-ALPTPEERLDLFDTARRLFVWDGYAEIG 285

Query: 248 LHAYEISNHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           +  +   +     A+    L  N+  Y D      IG+G  + SR   G  + A +   +
Sbjct: 286 IDHFGAPDDGLAIAQKTGKLRRNFQGYTDDTSDVLIGLGASSISRFPQGYAQNAPATGAY 345

Query: 301 PESWL--KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             +    +     GHA   ++ L +     E LM   R+ +   V+D+
Sbjct: 346 TAAIREGRFATSRGHAFRGEDRLRARMI--EMLMCDFRIDKAELVRDF 391


>gi|56415858|ref|YP_152933.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364787|ref|YP_002144424.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56130115|gb|AAV79621.1| hypothetical protein SPA3853 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096264|emb|CAR61863.1| hypothetical protein SSPA3583 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 413

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 158/382 (41%), Gaps = 40/382 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGGT
Sbjct: 42  LYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +   +     V  N+  TIE +P+              VNR S+GVQS 
Sbjct: 100 PLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRASIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R HN + A  A+  L    FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 HDSELHTLHRRHNTASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQP 219

Query: 200 DHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
           + L LY L      E    +Y + +D          ++  + L  + ++A     +E S 
Sbjct: 220 EELFLYPLYNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVLNPAPSAAAESCGFENSL 279

Query: 255 -----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S+LG  +LH  + W             S     S ++  +    P+   K V 
Sbjct: 280 ALGAGGRSYLG--NLHYCSPW-------------SSNLQTSRKIIQAFIDSPD---KTVI 321

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGF 367
            +G+       L  ++    F++  L   +G+S+ D++     +   D        RQG+
Sbjct: 322 NHGY------LLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFTSDALRDFPDLERFIRQGY 375

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
             +   SRLR T+ GM + D +
Sbjct: 376 CYQ-NGSRLRLTETGMALSDCL 396


>gi|68571760|gb|AAW66139.2| anaerobic coproporphyrinogen III oxidase [Rubrivivax gelatinosus]
          Length = 462

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISS 73
           G+  L +Y+H PFC   C YC  N  + ++      ++ +   E+   + +L   +S+S 
Sbjct: 53  GTPPLSLYIHIPFCESVCYYCACNKIITKHHERSAEYLDALEAEIALHVAELGKGQSVSQ 112

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGG+P+ +  + I  ++  +  ++ + +  EI+IE +P +      Q     G NRI
Sbjct: 113 LHFGGGSPTFLTDEEIGRLMARLRDSFKIVAGAEISIEVDPRTATPERLQSLAGMGFNRI 172

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  +      + R  +       +  AR N F  ++ DLIY LPKQT   +   +Q
Sbjct: 173 SFGIQDFDADVQVAVHRVQSFESVRDLVVAARANGFESINADLIYGLPKQTPESFTRTIQ 232

Query: 193 RALSYAVDHLSLY 205
           +      D ++LY
Sbjct: 233 QIAELRPDRIALY 245


>gi|332971027|gb|EGK09998.1| oxygen-independent coproporphyrinogen III oxidase [Kingella kingae
           ATCC 23330]
          Length = 511

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 3/205 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+   EN +       + +Y+H PFC   C YC  N  + +     + ++     EM  +
Sbjct: 47  YIQTLENTLKD-SDKPVSLYIHIPFCNVICYYCGCNKVITKDTSKADEYLNYLEKEMALL 105

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  L G   ++ + FGGGTP+ +  + +  + + I +++ +  + E +IE +P  V   +
Sbjct: 106 KPHLHGKHKLAQLHFGGGTPTFLNDEQLERVFNMIREHFELLPDGEYSIEIDPRKVSRES 165

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                + G NR+S+G+Q  + +    + R     E    I  AR   F  +S DLIY LP
Sbjct: 166 VFKLAQLGFNRMSVGIQDFDPKVQAAVNRIQTVEETKNVIDSAREAGFKSISVDLIYGLP 225

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            Q++   +  L   LS   D L+LY
Sbjct: 226 HQSVQSIKPTLDTVLSLNPDRLALY 250


>gi|317131345|ref|YP_004090659.1| Coproporphyrinogen dehydrogenase [Ethanoligenens harbinense YUAN-3]
 gi|315469324|gb|ADU25928.1| Coproporphyrinogen dehydrogenase [Ethanoligenens harbinense YUAN-3]
          Length = 496

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT---GPRSIS 72
            S  +Y+  PFC  +C YC F SH V + K     ++     E+  +  L    G R + 
Sbjct: 164 RSASLYISIPFCPTRCLYCSFISHDVEKTKKLLPAYVDRLCEELAAVGALVRRLGLR-LE 222

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVN 131
           +I+ GGGTP+ +    +A + D +   +++ S  E T+EA  P ++        R  G  
Sbjct: 223 TIYMGGGTPTSLSAPMLAQVFDAVRAAFSLDSLREYTVEAGRPDTITPEKLAAIRAGGCT 282

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+ +  Q+L+   LR +GR H   +   A H+AR   F  ++ DLI  LP  T   +   
Sbjct: 283 RLCINPQTLDADILRRIGRAHTPEQFFEAFHMARGAGFSSINTDLIAGLPGDTPAGFSRT 342

Query: 191 LQRALSYAVDHLSLYQLTIEK 211
           L   L  A + ++++ L +++
Sbjct: 343 LDALLPLAPEGVTVHTLAMKR 363


>gi|313205860|ref|YP_004045037.1| oxygen-independent coproporphyrinogen iii oxidase [Riemerella
           anatipestifer DSM 15868]
 gi|312445176|gb|ADQ81531.1| oxygen-independent coproporphyrinogen III oxidase [Riemerella
           anatipestifer DSM 15868]
 gi|315022745|gb|EFT35769.1| coproporphyrinogen III oxidase [Riemerella anatipestifer RA-YM]
 gi|325336703|gb|ADZ12977.1| Coproporphyrinogen III oxidase related Fe-S oxidoreductase
           [Riemerella anatipestifer RA-GD]
          Length = 451

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC + C +C  +  + +    +  ++QS + E Q    L   +  I  +  G
Sbjct: 50  ISIYIHLPFCEQLCTFCACHKRITKQHSVETPYLQSVIKEWQLYLALFDEKPKIKELHLG 109

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P+N+ ++++ I    T++   E + E +P++    + Q     G  R+S GV
Sbjct: 110 GGTPTFFSPENLKILIEEILSGGTIAEKPEFSFEGHPNNTTREHLQVLYDLGFRRVSFGV 169

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +E+  + + R             AR I +  +S DL++ LP  T  + E  +++ ++
Sbjct: 170 QDYDEKVQKAINRVQPFENVEKVTQWAREIGYESVSHDLVFGLPFHTWEKMEYTIRKTMT 229

Query: 197 YAVDHLSLY 205
              D L+ Y
Sbjct: 230 LKPDRLAFY 238


>gi|312962434|ref|ZP_07776925.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens WH6]
 gi|311283361|gb|EFQ61951.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens WH6]
          Length = 460

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 17/289 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           + +  L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  + 
Sbjct: 49  KAARPLSLYVHVPFCANICYYCACNKVITKDRGRAHAYLQRLEQEIQLVACHLDPKQPVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   +       R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRQVMTCLRQHFNLLDDDSGDYGIEIDPREADWATMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+ +  R + R  +  E  A I  AR + F  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSVGLQDLDPEVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPKQTPINFAR 228

Query: 190 ELQRALSYAVDHLSLYQLT--IEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITS 244
            ++  +    D LS++      E+     +++ D DL  P+E + +    +  LTQ+   
Sbjct: 229 TVEEVIKLQPDRLSVFNYAHLPERFMPQRRINTD-DLPSPAEKLLMLQTTIEQLTQAGYR 287

Query: 245 AHGLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
             G+  + + +     A+    L      Y  +G  D IG+G  A S++
Sbjct: 288 YIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAISQI 336


>gi|288818567|ref|YP_003432915.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787967|dbj|BAI69714.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|308752158|gb|ADO45641.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
          Length = 456

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +    L +Y H PFC   C +C  N  +   K     +++    EM  ++    P RS
Sbjct: 45  SNERKRPLSLYFHIPFCESACWFCGCNVIISHRKDVSRRYLEYIYREMDMLKSYIDPSRS 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +  Q I  +   I +N++  S+ E++ E +P  +     +     G 
Sbjct: 105 VVQLHWGGGTPNFLTNQEIRELFGKIRENFSFDSSAEVSTEIDPRYLSEGQLETLADVGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+E   + + R    S     +   R++ F  ++ DLIY LP QT  +++ 
Sbjct: 165 NRVSMGLQDLDEDVQKAINRIQPESLMREVMKQLRSLGFKSINIDLIYGLPYQTPEKFKR 224

Query: 190 ELQRALSYAVDHLSLYQLT 208
            +++ +    D ++++   
Sbjct: 225 TIEKTIELDPDRVAVFNFA 243


>gi|282600881|ref|ZP_05980013.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
 gi|282571253|gb|EFB76788.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
          Length = 487

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 9/221 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTG 67
           + G       VY   PFC  +C YC F S     K  +   + ++     E+  +RQ T 
Sbjct: 147 LAGADPMDCSVYAGIPFCPTRCSYCSFVSRTVGDKATRALVQPYVDKLCEELTAIRQ-TA 205

Query: 68  PRS---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQ 123
            R    I + + GGGTP+ +    +  ++  IA+ + +S+  E T+EA  P        +
Sbjct: 206 DRCGLHIRTFYIGGGTPTSLSAAQLEQLMGHIARTFDLSTLDEYTVEAGRPDCTNAEKLR 265

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++ G  RIS+  Q+  ++ LR +GR H A + I     AR      ++ DLI  LP  
Sbjct: 266 IIKQYGATRISINPQTFSDEVLRNIGRRHTAQDIIDCFAAARAAGHQNINMDLIAGLPGD 325

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           T+  +   L++A++   ++++++ LT+++ +     H+  D
Sbjct: 326 TVEGFTHSLEQAIALDPENITVHTLTLKRASNLVVEHRAAD 366


>gi|148559856|ref|YP_001258639.1| coproporphyrinogen III oxidase [Brucella ovis ATCC 25840]
 gi|148371113|gb|ABQ61092.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ovis
           ATCC 25840]
          Length = 444

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR SLG
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRASLG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ ++ +    +GR         A  L R +   R++FDLIY LP Q +       +R +
Sbjct: 166 VQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQMVETLRETCERVV 225

Query: 196 SYAVDHLSLY 205
           + + D ++ Y
Sbjct: 226 TLSPDRVACY 235


>gi|126730268|ref|ZP_01746079.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
 gi|126709001|gb|EBA08056.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
          Length = 399

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 96/187 (51%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFGGG 79
           +Y+H PFC + C +C   +         + ++++   E++ +R+ L     +S + +GGG
Sbjct: 1   MYLHVPFCRRLCWFCACRTQGTATAKPVDAYVETLKAELKLLRRALPAGVKLSRLHWGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+ P  ++ ++D I +    + + E ++E +P+ ++          G+NR S+GVQ 
Sbjct: 61  TPTLLAPDMMSRLIDAIRETADFADHAEFSVEIDPNEIDAARLDVLAAGGMNRASIGVQD 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + Q    +GR         A+ + R      ++ D+++ LP QT  +    +Q+ LS+A
Sbjct: 121 FDPQIQEAIGRPQGYDVTRHAVEMIRERGVASLNTDILFGLPHQTRARITETVQKLLSFA 180

Query: 199 VDHLSLY 205
            D ++LY
Sbjct: 181 PDRVALY 187


>gi|213157825|ref|YP_002320623.1| coproporphyrinogen III oxidase [Acinetobacter baumannii AB0057]
 gi|213056985|gb|ACJ41887.1| coproporphyrinogen III oxidase [Acinetobacter baumannii AB0057]
          Length = 463

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 4   LSAYENNM----TGQGSNSLGVYVHWPFCVKK----CPYCDFNSHVRRYKVGQE-NFIQS 54
           L   ENN     T     S+ +Y+  P+C+      C +C F +  + YK  +E +F   
Sbjct: 36  LKEEENNYFLLNTDAQYKSINLYLGIPYCIPTDPPHCGFCLFPT--QDYKGKREMDFYLD 93

Query: 55  FLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSNVEITI 110
           FL+ E    ++      + S++ GGGTP+L++P +   +  ++  +  +  +SS +E+T+
Sbjct: 94  FLSREAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTL 153

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P     +  +  + AG NR+S+GVQ + ++ +   GR     +   AI L       
Sbjct: 154 EGIPQLFNEDKIRAIKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLS 213

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            + DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K      PS  
Sbjct: 214 CNVDLIYGWPNQTVEAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQN---TPSIE 270

Query: 231 VAVDLYNLTQSITSAHG 247
             +++YN+ +    + G
Sbjct: 271 KKIEMYNIAKQFLISKG 287


>gi|194365207|ref|YP_002027817.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia
           R551-3]
 gi|194348011|gb|ACF51134.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           maltophilia R551-3]
          Length = 469

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 6/257 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q + +L +YVH PFC   C YC  N  + R +    +++   L E   +  Q    R 
Sbjct: 55  SNQLARALSLYVHVPFCSSPCFYCGCNRVISRDRGRGHSYVSRVLAEADLLAPQFEDGRE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++ + +  +++G+ +  +++ SS  + +IE +P  ++  +     + 
Sbjct: 115 VIQLHLGGGTPNFLDAEAMTTLIEGLRRRFDFSDSSQRDFSIELDPRFIDTPDVAMLARL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQW 187
           G NR SLGVQ  + Q    + R     + +  +   R+   R ++ DLIY LP Q++  +
Sbjct: 175 GFNRASLGVQDFDPQVQESINRVQGVQQTLDILRACRDSGMRSVNVDLIYGLPGQSLEGF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  L+   D L++Y        LF    +  +  LPS    + L  L     SA G
Sbjct: 235 GRTLELVLALRPDRLAVYGYA-HLPHLFRAQKQIDESRLPSPEDKLALLGLAVERLSAAG 293

Query: 248 LHAYEISNHSFLGAESL 264
            + Y   +H  L  E L
Sbjct: 294 -YQYIGMDHFALPEEDL 309


>gi|219850215|ref|YP_002464648.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
 gi|219544474|gb|ACL26212.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
          Length = 457

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 4/205 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL+A     T   ++ + VYVH PFC ++C YC  N+   +     ++++     E++ +
Sbjct: 38  YLAALREVATT--TDPISVYVHLPFCAERCAYCGCNATATKRTEVVDHYLDRLERELELV 95

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               G  R +  + +GGGTP+ +       ++  +   +T+    E+ +E +P       
Sbjct: 96  TATLGTGRQVVQLHWGGGTPNFLNEAQSRRLMKLLHTAFTIDPAAEVALEVDPRIGSREQ 155

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
              +R+ G NRIS GVQ +       +GR    S+    ++ AR+  F  ++ DL+Y LP
Sbjct: 156 IFLFRELGFNRISFGVQDIAHDVQVAIGRIQPLSQTQTVVYAARDAGFTSINIDLVYGLP 215

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT T +   LQ  +    D ++ +
Sbjct: 216 YQTPTSFATTLQAIIDLRPDRIACF 240


>gi|325473187|gb|EGC76383.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           denticola F0402]
          Length = 422

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGG 78
           +Y+H P+C K C +C   S  R      +++    + +++     +     +I+S++FGG
Sbjct: 51  IYIHVPYCKKICNFC---SMRRTINPVPDDYAALVIRQIENYGKTEYVKTSNINSVYFGG 107

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +A IL  + KN+ ++ + EI++E   S ++    +   + G+NRIS G+Q
Sbjct: 108 GTPTTLPAKQLAEILKALQKNFNIAKDAEISMETTVSELDDEKLKILFENGLNRISAGIQ 167

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++  + LGR  N   A   +  A +  F  ++ D+IY  P +T    + +L +A + 
Sbjct: 168 TFNDEGRKTLGRIGNGENAENFLRRAFKTGFKNVNIDIIYNYPGETKEILKEDLHKAFAL 227

Query: 198 AVDHLSLYQL----------TIEKGTLFYK-MHKDGDLVLP----SENVAVDLYNLTQSI 242
            +   S Y L          +++K     K +H+D +  L     S     D   +T+ +
Sbjct: 228 DIAGFSFYSLIVMDTSKIGRSVDKEEYAEKTLHQDAEFFLTILEESRKAGYDFLEITKLV 287

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
                 + Y  S H  LG            GD   +G GA
Sbjct: 288 KPGRDNYEYIRSGH--LG------------GDIFPVGAGA 313


>gi|260221067|emb|CBA29262.1| Oxygen-independent coproporphyrinogen-III oxidase [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 466

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFGGGT 80
           YVH PFC   C YC  N  + ++      +++    E++   +L G  +S+S +  GGG+
Sbjct: 64  YVHIPFCESLCYYCACNKIITKHHDKAATYLRYLTREVELHTKLMGTGQSVSQLHLGGGS 123

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  ++  + +N++ ++  E +IE +P +V+ +      + G NR+S GVQ  
Sbjct: 124 PTFLSDAELRELMAMLRRNFSFAAGGEYSIEVDPRTVDASRLDTLAELGFNRLSFGVQDF 183

Query: 141 EEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +    + + R   A +  A +  AR   F  ++ DLIY LP+Q+   ++  L +  +   
Sbjct: 184 DPAVQKAVHRVQPAEQVFALVEAARARGFESINVDLIYGLPRQSPESFDRTLAQVNALRP 243

Query: 200 DHLSLY 205
           D ++LY
Sbjct: 244 DRIALY 249


>gi|302344971|ref|YP_003813324.1| coproporphyrinogen dehydrogenase [Prevotella melaninogenica ATCC
           25845]
 gi|302150174|gb|ADK96436.1| coproporphyrinogen dehydrogenase [Prevotella melaninogenica ATCC
           25845]
          Length = 454

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 1/190 (0%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
            +L  Y H PFC + C YC  NS+    +   E ++Q+   E+  + + +   R IS I 
Sbjct: 46  KNLSFYFHMPFCRRLCHYCGCNSYPMAKEERIEAYVQALHKEIDLVAKHIDKSRRISQIH 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGG+P+ +    +  + + +   ++     EI IE +P  +   ++QG   A  NR SL
Sbjct: 106 YGGGSPTAMPVSVLKELNEHLLSLFSTIEQPEIAIECHPGYLTAKDWQGLLDARFNRFSL 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ   E+ LR + R  +       + + RN    ++ D ++ LP QT   ++  ++RA+
Sbjct: 166 GVQDFNEEVLRLVNRTPSELPTEEIVAILRNAGVNINMDFLFGLPLQTSDSFKKTIERAV 225

Query: 196 SYAVDHLSLY 205
           +   D ++ +
Sbjct: 226 AMRPDRVTTF 235


>gi|107021993|ref|YP_620320.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia AU 1054]
 gi|116688937|ref|YP_834560.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia HI2424]
 gi|105892182|gb|ABF75347.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia AU 1054]
 gi|116647026|gb|ABK07667.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia HI2424]
          Length = 463

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R +
Sbjct: 51  GASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMALQAALFDPSRPV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V        R  G
Sbjct: 111 TQLHWGGGTPTFLSDDETAELMAATREHFALAPDTDAEFSIEIDPRTVTPATLVHLRTIG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R    S     +  AR   F  +S DLIY LP QT+  + 
Sbjct: 171 FNRLSLGVQDFDPAVQQAINRIQPLSMTADLLGAARATGFHSVSVDLIYGLPHQTVAVFA 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LP     + L  L   + ++ G
Sbjct: 231 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDAALPPPETRIALLGLAIDMLTSAG 288


>gi|301597997|ref|ZP_07243005.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB059]
          Length = 402

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 4   LSAYENNM----TGQGSNSLGVYVHWPFCVKK----CPYCDFNSHVRRYKVGQE-NFIQS 54
           L   ENN     T     S+ +Y+  P+C+      C +C F +  + YK  +E +F   
Sbjct: 5   LKEEENNYFLLNTDAQYKSINLYLGIPYCIPTDPPHCGFCLFPT--QDYKGKREMDFYLD 62

Query: 55  FLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSNVEITI 110
           FL+ E    ++      + S++ GGGTP+L++P +   +  ++  +  +  +SS +E+T+
Sbjct: 63  FLSREAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTL 122

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P     +  +  + AG NR+S+GVQ + ++ +   GR     +   AI L       
Sbjct: 123 EGIPQLFNEDKIRAIKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLS 182

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            + DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K      PS  
Sbjct: 183 CNVDLIYGWPNQTVEAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQN---TPSIE 239

Query: 231 VAVDLYNLTQSITSAHG 247
             +++YN+ +    + G
Sbjct: 240 KKIEMYNIAKQFLISKG 256


>gi|330446166|ref|ZP_08309818.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490357|dbj|GAA04315.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 465

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 4/226 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S  E+ ++G     L  YVH PFC  +C YC+F  +    ++  + F    +  ++  +Q
Sbjct: 59  SRSESTISGIAKRCL--YVHIPFCRVRCTYCNFFQYASSKQLVDDYFAALMIELVEKAKQ 116

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             T      +++ GGGTP+ +  + I  +   I +++ ++++ E+T+E   +  +   F+
Sbjct: 117 PWTQAAPFQAVYIGGGTPTDLSAKQIEQLGKMIRQHFPLTTDCELTLEGRINRFDDEMFE 176

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQ 182
              + G NR S GVQS + Q  R   R  +    ++ +  LA+     +  DL+Y LP Q
Sbjct: 177 SALEGGFNRFSFGVQSFDTQVRRKAKRLDDREAVLSRVQRLAQYDQAPIVIDLLYGLPYQ 236

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            +T W+ +L    +     + LYQL    GT    + + G L  P+
Sbjct: 237 DLTVWQQDLSDFFATGAHGVDLYQLVEMNGTPMADLVEKGRLPQPA 282


>gi|239826166|ref|YP_002948790.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
 gi|239806459|gb|ACS23524.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. WCH70]
          Length = 501

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 139/289 (48%), Gaps = 21/289 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R  +I+
Sbjct: 174 AHEVSIYIGIPFCPTKCAYCTFPAYAIGGRQGSVDAFLAGLHYEMREVGRFLKERGINIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + +++     V EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSITAEEMDRLYAEMYQSFPNVERVREITVEAGRPDTITPEKLNVLKKWNI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP +   ++  
Sbjct: 294 DRISINPQSYIQETLKAIGRHHTVDETIEKFHLAREMGMNNINMDLIIGLPGEGTKEFSY 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L+ ++ +   K +K    V   + ++ ++    Q  T  HG  
Sbjct: 354 TLAQTEKLMPESLTVHTLSFKRASEMTK-NKAKYKVADRDEIS-EMMKAAQEWTKRHGYV 411

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
            Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 412 PYYLYRQKNILGNLENVGYALPGKESIYNIMIMEEQQSIIGLGCGASSK 460


>gi|254303795|ref|ZP_04971153.1| coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323987|gb|EDK89237.1| coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 411

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 10/279 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++     +     
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTEYLCEEIKKYGAYEFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +FFGGGTP++ + + +  IL  + +N+  S + E+T E    ++     +   + G
Sbjct: 94  EIDVVFFGGGTPTIFKKEQLERILKTLNENFKFSKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    + ++   +  F  +   D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKLLNRTYDKDYVVESLKEIKKRFSGLVCIDIIYNYANQTDEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +         D +S Y L I  G+   K   KD  + + S     +L+NL  +     G
Sbjct: 214 QDADLLAEVEADSVSFYSLMIHDGSDISKEREKDKSVYIYSLERDEELHNLFYNRCIEKG 273

Query: 248 LHAYEISNHSFLGAES---LHNLNYWRYGDYIGIGPGAH 283
               E++  +  G +    + N N  +    IG+G G H
Sbjct: 274 YKLLELTKLT-NGKDKYKYIRNNNTLKNLLPIGVGAGGH 311


>gi|26990486|ref|NP_745911.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Pseudomonas putida KT2440]
 gi|24985460|gb|AAN69375.1|AE016574_7 oxygen-independent Coproporphyrinogen III oxidase family protein
           [Pseudomonas putida KT2440]
          Length = 471

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 24/307 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSIS-- 72
           + +  +Y+  P+C++ C +CD  ++ R  +V ++  +I+  L E+  +    G  S+   
Sbjct: 71  AKNTALYLGVPWCIQTCSFCDL-AYSRSPRVEEKREYIEVILKELD-IYNNAGLASVPAG 128

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S++FGGGTPS+++   +A  +DG  +   ++ N  IT+EA+P+++  +  +  R A VNR
Sbjct: 129 SLYFGGGTPSILDNDLLAAFVDGALQRSRLADNPVITLEASPATLTTSKLKLLR-ARVNR 187

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           ISLGVQS +    +  GR     + +  +      F  ++ D++Y +P Q++    + L+
Sbjct: 188 ISLGVQSTDTALRQREGRILPREKLLERVATTLEHFDLVNTDVLYGMPGQSLESVFLTLK 247

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++  V  ++ Y+  +  GT  Y++ +       SE  A ++Y L ++   A G     
Sbjct: 248 DLVNLDVPSITFYRNELFAGTKSYQLARQQPWATVSEYKAREMYFLGKTYLEACGYQESP 307

Query: 253 ISNHSFLGAESLHNLNYW-----RYGD---YIGIGPGAHSRVKVGSHRVAISIEKHPE-- 302
           +    F+ A     +  W     R+     Y G+G GA S     SH V    + H    
Sbjct: 308 LG--WFVKARKTEAITSWETMIERWSTVVPYFGLGMGAFS--TAASHWV----QNHESLN 359

Query: 303 SWLKMVR 309
            W++ VR
Sbjct: 360 GWMERVR 366


>gi|148258032|ref|YP_001242617.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. BTAi1]
 gi|146410205|gb|ABQ38711.1| coproporphyrinogen III oxidase, anaerobic [Bradyrhizobium sp.
           BTAi1]
          Length = 450

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGG 79
           +Y+H PFC   C YC  N+ V +       +  +   E+  + +  G R  +  I FGGG
Sbjct: 50  LYLHVPFCRSMCWYCGCNTMVAKRDEPIAVYESALRCEIDMVSRQIGRRLQVGHIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++ P++   ++  +  ++ V  + EI IE +P ++          +GVNR SLGVQS
Sbjct: 110 TPTIMAPESFVDLVGSLRHSFFVLPSAEIAIEIDPRTLTRAMIAALGASGVNRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +    + + R  +  +  AA H  R +    ++FDLIY LP Q +      ++R++   
Sbjct: 170 FDPLVQKAINRVQSFEQTAAATHGLREVGVAGINFDLIYGLPHQNVASCLDTVRRSIELR 229

Query: 199 VDHLSLY 205
            D LS++
Sbjct: 230 PDRLSVF 236


>gi|269102794|ref|ZP_06155491.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162692|gb|EEZ41188.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 463

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 4/213 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGG 78
           +YVH PFC  +C YC+F  +    ++  +++  + + E++   Q   T      +++ GG
Sbjct: 76  LYVHIPFCRVRCTYCNFFQYASSQQL-IDDYFAALMIELKLKAQQPWTQSAPFHAVYIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  +   I K++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 135 GTPTDLTAQQVKQLGTMIRKHFPLTTDCELTLEGRINRFSDEMFDSALEGGFNRFSFGVQ 194

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  I  LA      +  DL+Y LP QT+  W+ +L+  ++ 
Sbjct: 195 SFDTQVRRKAKRLDDREVVLDRIAALAATDQAPIVIDLLYGLPYQTLDVWQQDLEDFMTS 254

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
               + LYQL    GT    +   G L  P++ 
Sbjct: 255 GAHGVDLYQLIEMGGTPMKNLIDKGKLPEPADT 287


>gi|239943853|ref|ZP_04695790.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|239990309|ref|ZP_04710973.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           11379]
 gi|291447316|ref|ZP_06586706.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|291350263|gb|EFE77167.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
          Length = 477

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 8/206 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC  KC +C+  + +       + ++ +  T+++   ++   R + +I+ GG
Sbjct: 55  LNLYLHVPFCRYKCGFCNLYTVISEDMDVYDAYMDALCTQIRDHTEIIQSRRLRTIYIGG 114

Query: 79  GTPSLIEPQNIALI---LDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRI 133
           GTPSL+  ++   +   L+ +  NW  S+  E+ IEA P S+  E    +G    G+ R 
Sbjct: 115 GTPSLLSLRHFEQLFATLNEVYPNWR-STVEEVAIEATPDSIVKEPGTLEGLIALGLTRA 173

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ++G+QSL    +R  GR     + I  AI + R    P +S DLI     QT   W   +
Sbjct: 174 NIGIQSLVPSEIREAGRGQAGEDVIRRAIEITREKQLPNLSTDLIMGFAGQTPESWRHSV 233

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYK 217
               + A + +S Y LT+     F K
Sbjct: 234 DELTALAPETISTYFLTVRPDAWFSK 259


>gi|42526686|ref|NP_971784.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
 gi|41817001|gb|AAS11695.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
          Length = 422

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGG 78
           +Y+H P+C K C +C   S  R      +++    + +++     +     +I+S++FGG
Sbjct: 51  IYIHVPYCKKICNFC---SMRRTINPVPDDYAALVIRQIENYGKTEYVKTSNINSVYFGG 107

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +A IL  + KN+ ++ + EI++E   S ++    +   + G+NRIS G+Q
Sbjct: 108 GTPTTLPAKQLAEILKALQKNFNIAKDAEISMETTVSELDDEKLKILFENGLNRISAGIQ 167

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++  + LGR  N   A   +  A +  F  ++ D+IY  P +T    + +L +A + 
Sbjct: 168 TFNDEGRKTLGRIGNGENAENFLRRAFKTGFKNVNIDIIYNYPGETKEILKDDLHKAFAL 227

Query: 198 AVDHLSLYQL----------TIEKGTLFYK-MHKDGDLVLP----SENVAVDLYNLTQSI 242
            +   S Y L          +++K     K +H+D +  L     S     D   +T+ +
Sbjct: 228 DIAGFSFYSLIVMDTSKIGRSVDKEEYAEKTLHQDAEFFLTILEESRKAGYDFLEITKLV 287

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
                 + Y  S H  LG            GD   +G GA
Sbjct: 288 KPGRDNYEYIRSGH--LG------------GDIFPVGAGA 313


>gi|254420307|ref|ZP_05034031.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
 gi|196186484|gb|EDX81460.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
          Length = 451

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 3/205 (1%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L   E  +      SL VYVH PFC + C YC  ++ +         F    L E+    
Sbjct: 34  LEEVETWLIADEGESLSVYVHIPFCDRLCWYCGCHTSIVSDYERVAAFQAQLLREIALWA 93

Query: 64  QLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  G R   +  + FGGG+P+++ P +   ++D +   +  + + E+ +E +P+ +E+  
Sbjct: 94  ERPGVRRGVVRHLHFGGGSPNILRPADFVAVVDRLRSIFRFAPDAEVAVELDPARLEIGF 153

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALP 180
             G  +AGV R+SLGVQ+ +      + R    ++   A+  L R     ++FDL+Y LP
Sbjct: 154 IAGLAQAGVTRVSLGVQTFDPAVQVRVNRPQPYAQVAEAVEELRRAGIAGVNFDLMYGLP 213

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT          A   A D L+++
Sbjct: 214 GQTPDNVAETADLAAGLAPDRLAVF 238


>gi|149423624|ref|XP_001516694.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 122

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++  LR LGR H A+EA+  +  AR +FP R S DL++ LP+Q++  W  +L   L  
Sbjct: 1   SLDDAELRLLGRTHTAAEALQTLEEARRLFPGRTSLDLMFGLPEQSVAAWRRQLTHLLQC 60

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             DHLSLYQL++E+GT  ++  + G L  P+  V+ ++Y   +          YE+SN
Sbjct: 61  CDDHLSLYQLSLERGTALFRRVQRGALPAPAPEVSAEMYRAGREALREANFRQYEVSN 118


>gi|297531162|ref|YP_003672437.1| coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
 gi|297254414|gb|ADI27860.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
          Length = 519

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--S 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R I  +
Sbjct: 192 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 251

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----EITIEAN-PSSVEVNNFQGYRK 127
           +I++GGGTP+ I    +  +    A  + V  +V    EIT+EA  P ++     +  +K
Sbjct: 252 TIYYGGGTPTSITADEMDRLY---AHMYDVFPDVDRVREITVEAGRPDTITPEKLEVLKK 308

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + +
Sbjct: 309 WRIDRISINPQSYIQETLKAIGRHHTVEETIHKFHLARQMGMNNINMDLIIGLPGEGLAE 368

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L        + L+++ L+ ++ +   K +K    V   E V   +    Q  T  H
Sbjct: 369 FTHTLAETERLMPESLTIHTLSFKRASEMTK-NKQKYKVASREEVQA-MMKAAQEWTKEH 426

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           G   Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 427 GYVPYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSK 478


>gi|169794848|ref|YP_001712641.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AYE]
 gi|332852302|ref|ZP_08434107.1| radical SAM domain protein [Acinetobacter baumannii 6013150]
 gi|332870525|ref|ZP_08439289.1| radical SAM domain protein [Acinetobacter baumannii 6013113]
 gi|169147775|emb|CAM85638.1| putative Oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AYE]
 gi|332729432|gb|EGJ60772.1| radical SAM domain protein [Acinetobacter baumannii 6013150]
 gi|332732262|gb|EGJ63530.1| radical SAM domain protein [Acinetobacter baumannii 6013113]
          Length = 469

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 4   LSAYENNM----TGQGSNSLGVYVHWPFCVKK----CPYCDFNSHVRRYKVGQE-NFIQS 54
           L   ENN     T     S+ +Y+  P+C+      C +C F +  + YK  +E +F   
Sbjct: 42  LKEEENNYFLLNTDAQYKSINLYLGIPYCIPTDPPHCGFCLFPT--QDYKGKREMDFYLD 99

Query: 55  FLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSNVEITI 110
           FL+ E    ++      + S++ GGGTP+L++P +   +  ++  +  +  +SS +E+T+
Sbjct: 100 FLSREAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTL 159

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P     +  +  + AG NR+S+GVQ + ++ +   GR     +   AI L       
Sbjct: 160 EGIPQLFNEDKIRAIKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLS 219

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            + DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K      PS  
Sbjct: 220 CNVDLIYGWPNQTVEAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQN---TPSIE 276

Query: 231 VAVDLYNLTQSITSAHG 247
             +++YN+ +    + G
Sbjct: 277 KKIEMYNIAKQFLISKG 293


>gi|251778880|ref|ZP_04821800.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083195|gb|EES49085.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 473

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 133/280 (47%), Gaps = 22/280 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E     +  + + +Y+   FC  KC YC F S+     VG +  ++ +L  +  ++++ G
Sbjct: 136 EEKFVNKKQDKISIYIGMAFCPTKCLYCSFTSNSI---VGNKKMVEPYLDAL--IKEIKG 190

Query: 68  PRS--------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSV 117
             S        I +++FGGGTP+ +  +    ++  I   +    NV E T+E   P ++
Sbjct: 191 ISSYVKEKNLEIETVYFGGGTPTSVNDEQFKSVMTEIYNGFIKEKNVKEFTVECGRPDTI 250

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
            ++  Q  +   V RIS+  Q++ +++L  +GR H   +      +AR + F  ++ D+I
Sbjct: 251 TLDKLQTMKAYDVTRISINPQTMNDETLNLIGRKHTVDDIKEKFKMARELEFDDINMDII 310

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVD 234
             LP +   +        +    D ++++ L +++G++ Y+  + K G L +P +   + 
Sbjct: 311 IGLPGEGHEELIKTRDELIKLNPDSITVHGLCLKRGSIMYENFILKKG-LDIPRQEEIIK 369

Query: 235 LYNLTQSITSAHGLHAYEI-SNHSFLGAESLHNLNYWRYG 273
           +Y  ++++     +  Y +    + +G  ++ N+ Y + G
Sbjct: 370 MYEESRNLAKHLNISPYYMYRQKNMIG--NMENVGYAKKG 407


>gi|258543608|ref|YP_003189041.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634686|dbj|BAI00662.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637742|dbj|BAI03711.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640796|dbj|BAI06758.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643851|dbj|BAI09806.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646906|dbj|BAI12854.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649959|dbj|BAI15900.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652949|dbj|BAI18883.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656003|dbj|BAI21930.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 461

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
             + +Y H PFC + C +C  N+ V R++ G+  +      EM+ +  L G  R++  + 
Sbjct: 49  EPVSLYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRIVALVGEQRTVRHVQ 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+ + P ++  I+  I   + V    E+ +E +P  V  +        G  RISL
Sbjct: 109 FGGGTPTTLPPHSLRQIMRSIRTFFQVDPQAELAMELDPRHVPQDYPALLGDLGFTRISL 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ LE +     GR+ +  +  A+I  AR+     ++ DLIY LP QT+        + 
Sbjct: 169 GVQDLEPRVQEACGRHQSFEQTQASIQAARDAGVSGVNIDLIYGLPYQTVESVGATALKI 228

Query: 195 LSYAVDHLSLY 205
            S   D L+++
Sbjct: 229 ASLRPDRLAVF 239


>gi|262281169|ref|ZP_06058951.1| coproporphyrinogen III oxidase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257400|gb|EEY76136.1| coproporphyrinogen III oxidase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 465

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 14/255 (5%)

Query: 4   LSAYENNM----TGQGSNSLGVYVHWPFCVKK----CPYCDFNSHVRRYKVGQENFIQSF 55
           L+  ENN     T     S+ +Y+  P+C+      C +C F +   + K   E ++   
Sbjct: 38  LNEEENNHLLLNTDAKYKSINLYLGIPYCIPTDPPHCGFCLFPTQDYKGKKEMEYYLDFL 97

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSNVEITIEA 112
             E    ++      + S++ GGGTP+L++P +   +  I+  +  +   S+ +E+T+E 
Sbjct: 98  TKEAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYIKLVNIVSSLFPDVGTSTPIEMTLEG 157

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P     +  +  ++AG NR+S+GVQ + ++ +   GR     +   AI L        +
Sbjct: 158 IPQLFNEDKIRAIKEAGFNRVSMGVQQVNDELIVTSGRKQTRKQVFDAIELFHKYSLSCN 217

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K      PS    
Sbjct: 218 VDLIYGWPNQTIEAMLGDLESIVQSGIKHITHYELNIAGRSDFATRQKQN---TPSIEKK 274

Query: 233 VDLYNLTQSITSAHG 247
           +++YN+ +    + G
Sbjct: 275 IEMYNIAKQFLISKG 289


>gi|56419177|ref|YP_146495.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
 gi|56379019|dbj|BAD74927.1| Fe-S oxidoreductase [Geobacillus kaustophilus HTA426]
          Length = 499

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--S 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R I  +
Sbjct: 172 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 231

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----EITIEAN-PSSVEVNNFQGYRK 127
           +I++GGGTP+ I    +  +    A  + V  +V    EIT+EA  P ++     +  +K
Sbjct: 232 TIYYGGGTPTSITADEMDRLY---AHMYDVFPDVDRVREITVEAGRPDTITPEKLEVLKK 288

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + +
Sbjct: 289 WRIDRISINPQSYIQETLKAIGRHHTVEETIHKFHLARQMGMNNINMDLIIGLPGEGLAE 348

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L        + L+++ L+ ++ +   K +K    V   E V   +    Q  T  H
Sbjct: 349 FTHTLAETERLMPESLTIHTLSFKRASEMTK-NKQKYKVASREEVQA-MMKAAQEWTKEH 406

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           G   Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 407 GYVPYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSK 458


>gi|261418885|ref|YP_003252567.1| coproporphyrinogen III oxidase [Geobacillus sp. Y412MC61]
 gi|319765702|ref|YP_004131203.1| coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC52]
 gi|261375342|gb|ACX78085.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC61]
 gi|317110568|gb|ADU93060.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC52]
          Length = 499

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--S 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R I  +
Sbjct: 172 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 231

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----EITIEAN-PSSVEVNNFQGYRK 127
           +I++GGGTP+ I    +  +    A  + V  +V    EIT+EA  P ++     +  +K
Sbjct: 232 TIYYGGGTPTSITADEMDRLY---AHMYDVFPDVDRVREITVEAGRPDTITPEKLEVLKK 288

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + +
Sbjct: 289 WRIDRISINPQSYIQETLKAIGRHHTVEETIHKFHLARQMGMNNINMDLIIGLPGEGLAE 348

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L        + L+++ L+ ++ +   K +K    V   E V   +    Q  T  H
Sbjct: 349 FTHTLAETERLMPESLTIHTLSFKRASEMTK-NKQKYKVASREEVQA-MMKAAQEWTKEH 406

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           G   Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 407 GYVPYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSK 458


>gi|91976826|ref|YP_569485.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB5]
 gi|91683282|gb|ABE39584.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB5]
          Length = 480

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 10/214 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
            YVH PFC  +C +C F  +  R + G   ++   L E+  +    L     I +++ GG
Sbjct: 89  AYVHVPFCQTRCLFCGFFQNAWRPEAGAA-YVDDLLAELAIRSTTALVSSAPIDAVYIGG 147

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++  +++G+  +  ++S+ EIT+E      ++         GV R+S+GVQ
Sbjct: 148 GTPSALAADDLVRLVEGLRHHLPLTSDCEITLEGRAFGFDLAKAAKVADVGVTRMSIGVQ 207

Query: 139 SLEEQSLRFLGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +   +  R LGR  +  E        + L R     +  DLIY LP     +W  +++  
Sbjct: 208 TFSTEVRRRLGRKLSGPEVQSFLTDLVALGRTA---VVCDLIYGLPGHDGAEWCRDIEIV 264

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
               +D ++LY L    G       + G L  P+
Sbjct: 265 DQIGIDGVTLYALNTFPGGPLASAIEKGKLSPPA 298


>gi|215482395|ref|YP_002324577.1| Radical SAM superfamily protein [Acinetobacter baumannii
           AB307-0294]
 gi|213988094|gb|ACJ58393.1| Radical SAM superfamily protein [Acinetobacter baumannii
           AB307-0294]
          Length = 463

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 4   LSAYENNM----TGQGSNSLGVYVHWPFCVKK----CPYCDFNSHVRRYKVGQE-NFIQS 54
           L   ENN     T     S+ +Y+  P+C+      C +C F +  + YK  +E +F   
Sbjct: 36  LKEEENNYFLLNTDAQYKSINLYLGIPYCIPTDPPHCGFCLFPT--QDYKGKREMDFYLD 93

Query: 55  FLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSNVEITI 110
           FL+ E    ++      + S++ GGGTP+L++P +   +  ++  +  +  +SS +E+T+
Sbjct: 94  FLSREAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTL 153

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P     +  +  + AG NR+S+GVQ + ++ +   GR     +   AI L       
Sbjct: 154 EGIPQLFNEDKIRAIKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLS 213

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            + DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K      PS  
Sbjct: 214 CNVDLIYDWPNQTVEAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQN---TPSIE 270

Query: 231 VAVDLYNLTQSITSAHG 247
             +++YN+ +    + G
Sbjct: 271 KKIEMYNIAKQFLISKG 287


>gi|254475802|ref|ZP_05089188.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
 gi|214030045|gb|EEB70880.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
          Length = 445

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 99/192 (51%), Gaps = 2/192 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISS 73
            + S+ +Y+H PFC K C +C + +   +      +++++   E+  + Q   P  ++S 
Sbjct: 47  ANGSISIYLHVPFCRKLCWFCAYRTQSSQSDGPIRSYVEALKREISLVLQSLPPGTTVSR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP+++     + +   +     ++S+ E  +E +P+ V+++     + AGVN +
Sbjct: 107 LHFGGGTPTILPADVFSDLCATLTSAIPLASDYEFAVEVDPNDVDLDRVAALQAAGVNSV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q  + +    +GR  +     A +  L  +   +++FD++Y LP QT  +    LQ
Sbjct: 167 SMGIQDFDPEVQAAIGRTLSFDRVSAVVEDLRAHHIGQLTFDVLYGLPHQTGPRLTDTLQ 226

Query: 193 RALSYAVDHLSL 204
             LS + D  S+
Sbjct: 227 MLLSLSPDRFSV 238


>gi|16330810|ref|NP_441538.1| coproporphyrinogen III oxidase [Synechocystis sp. PCC 6803]
 gi|3122206|sp|P74132|HEMN_SYNY3 RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1653303|dbj|BAA18218.1| oxygen independent coprophorphyrinogen III oxidase [Synechocystis
           sp. PCC 6803]
          Length = 466

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 2/198 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP- 68
           N+       L +Y H PFC K C +C  N+ + ++K   + ++++   ++  +  L    
Sbjct: 48  NLGNYKKTPLSLYCHIPFCAKACYFCGCNTIITQHKPAVDPYLKAVAKQIALVAPLVDQQ 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + +GGGTP+ +  +    + + I   + ++ N EI+IE NP  V+ +     R+ 
Sbjct: 108 RPVQQLHWGGGTPNYLTLEQAEFLFNTITDAFPLAENAEISIEINPCYVDKDYIFALRQL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    Q  + + R    +     +   R   F  ++ DLIY LP Q +  +
Sbjct: 168 GFNRISFGIQDFNSQVQQAVNRIQPEAMLFQVMDWIRQANFDSVNVDLIYGLPHQNLATF 227

Query: 188 EMELQRALSYAVDHLSLY 205
              L++      D ++++
Sbjct: 228 RETLRKTAQLNPDRIAVF 245


>gi|313893178|ref|ZP_07826755.1| coproporphyrinogen dehydrogenase HemZ [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442531|gb|EFR60946.1| coproporphyrinogen dehydrogenase HemZ [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 475

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 133/293 (45%), Gaps = 23/293 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           +T      + +Y   PFC  +C YC F   + +   G+  F+ +   +++ M+ +     
Sbjct: 145 LTDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYNGKSQFLTALGRDIEDMKAIIQSYG 204

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
            ++ +++ GGGTP+++  ++   +L  ++    V    E T+EA  P SV     +   +
Sbjct: 205 LTVDTLYMGGGTPTVLGDEDFYQVLKQLS--ILVPDGHEFTVEAGRPDSVNPAKIRSMLE 262

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            GVNRIS+  Q++++  LR +GR H+A +    +   + N    ++ D I  LP QTM  
Sbjct: 263 LGVNRISINPQTMQDDILRRIGRGHSARDIDELLQYVKANTSLAVNMDFIAGLPHQTMQN 322

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L +++G+  Y +H   D  +P E++  ++    +      
Sbjct: 323 MIENMDYICQNLPENVTIHTLALKRGSPLYDLHMQDD--IPEEHLVAEMVQYGKERLEEA 380

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           G   Y +    ++  + L N+ Y   G                + +GPG+ S+
Sbjct: 381 GYVPYYLYRQQYMSGQ-LENIGYTLPGKACEYNIQIMEERQSILSMGPGSSSK 432


>gi|255323314|ref|ZP_05364448.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           showae RM3277]
 gi|255299606|gb|EET78889.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           showae RM3277]
          Length = 407

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 107/207 (51%), Gaps = 10/207 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           +Y+H PFC   C +C  N    R K+  E  ++ Q  L E++   +      ++I S++F
Sbjct: 42  IYIHVPFCDNICSFCSMN----RTKLEDELDSYTQYLLGEIKKYGKFPYLQAKNIRSVYF 97

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++++ +++  I+  +  ++ ++ + E ++E    ++ ++  +     GVNR S+G
Sbjct: 98  GGGTPTILKEKHLEPIITALRSSFNIAEDCEFSLETTLHNLNLSKVRLLESLGVNRFSIG 157

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           VQ+  ++  + L R H+   AI  + + R  F  M   D+I+  P+QT+ +   + +   
Sbjct: 158 VQTFSDKGRKLLNRVHDKKGAIEHLKMIRQNFSGMVCTDIIFNYPEQTIDEVLEDARLVD 217

Query: 196 SYAVDHLSLYQLTI-EKGTLFYKMHKD 221
              +D  S Y L + EK  L   + +D
Sbjct: 218 ELNIDSTSFYSLQLFEKSELAKTVSQD 244


>gi|160896925|ref|YP_001562507.1| coproporphyrinogen dehydrogenase [Delftia acidovorans SPH-1]
 gi|160362509|gb|ABX34122.1| Coproporphyrinogen dehydrogenase [Delftia acidovorans SPH-1]
          Length = 435

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 8/232 (3%)

Query: 22  YVHWPFCVKK----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           Y+  P+C+      C +C F +           ++     E Q M        +SS++ G
Sbjct: 6   YIGIPYCLPTTPNHCGFCLFPTQDYGGNGAMLKYLDYLEKEAQMMACHLRHDRLSSVYVG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+L+  ++   +++   + +   S  VE T+E  P     +  Q  ++AG NR+S+G
Sbjct: 66  GGTPNLLHAEDYIRLMNITRRIFGEPSEGVERTLEGIPQLFNHDKVQAIKEAGFNRVSMG 125

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ + ++ +R+ GR     + I+A+         ++ DLIY  P+QT+     +L+    
Sbjct: 126 VQQMSDRLIRYSGRRQTHEQVISALEEFNAARLSVNVDLIYGWPEQTLHDMLRDLREVCD 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             V H++LYQL I   + F +  +D   +LPS     ++Y    S   + G 
Sbjct: 186 LGVRHITLYQLNIAGRSDFSRQQRD---LLPSFENTYEMYEAACSYLGSRGF 234


>gi|28900282|ref|NP_799937.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260364367|ref|ZP_05777015.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260880850|ref|ZP_05893205.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260895993|ref|ZP_05904489.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|28808593|dbj|BAC61770.1| coproporphyrinogen oxidase homolog PhuW [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308087066|gb|EFO36761.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308091527|gb|EFO41222.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308113691|gb|EFO51231.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 456

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 6/268 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    L   +S    +
Sbjct: 60  NNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-AALMQELKEKAALPWTQSGIFHA 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR 
Sbjct: 119 VYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRF 178

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L 
Sbjct: 179 SFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLN 238

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
             +S     L LYQL +        + + G +  P+       +Y L  +  + H +   
Sbjct: 239 DFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQL 298

Query: 252 EISNHSFLGAE-SLHNLNYWRYGDYIGI 278
            +++ +    E SL+N     Y + + I
Sbjct: 299 SVNHWAVDNRERSLYNSLAKTYAEVLPI 326


>gi|153838952|ref|ZP_01991619.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus AQ3810]
 gi|149747586|gb|EDM58516.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus AQ3810]
          Length = 456

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 6/268 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    L   +S    +
Sbjct: 60  NNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-AALMQELKEKAALPWTQSGIFHA 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR 
Sbjct: 119 VYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRF 178

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L 
Sbjct: 179 SFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLN 238

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
             +S     L LYQL +        + + G +  P+       +Y L  +  + H +   
Sbjct: 239 DFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQL 298

Query: 252 EISNHSFLGAE-SLHNLNYWRYGDYIGI 278
            +++ +    E SL+N     Y + + I
Sbjct: 299 SVNHWAVDNRERSLYNSLAKTYAEVLPI 326


>gi|260903139|ref|ZP_05911534.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308107763|gb|EFO45303.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
          Length = 456

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 6/268 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    L   +S    +
Sbjct: 60  NNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-AALMQELKEKAALPWTQSGIFHA 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR 
Sbjct: 119 VYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRF 178

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L 
Sbjct: 179 SFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLN 238

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
             +S     L LYQL +        + + G +  P+       +Y L  +  + H +   
Sbjct: 239 DFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQL 298

Query: 252 EISNHSFLGAE-SLHNLNYWRYGDYIGI 278
            +++ +    E SL+N     Y + + I
Sbjct: 299 SVNHWAVDNRERSLYNSLAKTYAEVLPI 326


>gi|134294957|ref|YP_001118692.1| coproporphyrinogen III oxidase [Burkholderia vietnamiensis G4]
 gi|134138114|gb|ABO53857.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           vietnamiensis G4]
          Length = 463

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N            +++    E+     L  P R +
Sbjct: 51  GASSSELSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELALQAALFDPARPV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    +++ ++ ++  E +IE +P +V        R  G
Sbjct: 111 TQLHWGGGTPTFLSDAETAELMAATREHFALAPDMDAEFSIEIDPRTVTPATLVHLRNIG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R    +     I  AR   F  +S DLIY LP QT+  + 
Sbjct: 171 FNRLSLGVQDFDPVVQQAINRVQPRAMTADLISAARTAGFHSVSVDLIYGLPHQTVAVFA 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LPS    + L  L   + ++ G
Sbjct: 231 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPSPETRIALLGLAIDMLTSAG 288


>gi|237748563|ref|ZP_04579043.1| coproporphyrinogen III oxidase [Oxalobacter formigenes OXCC13]
 gi|229379925|gb|EEO30016.1| coproporphyrinogen III oxidase [Oxalobacter formigenes OXCC13]
          Length = 435

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 13/308 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFI-QSFLTEMQWMRQLTG 67
           M GQ    L +YVH PFC   C +C F  N   + +       + +      + ++ +  
Sbjct: 39  MAGQ-QRPLALYVHVPFCHHHCTFCPFYINQTKKDFSAKYTALLLKEIADTAEVLKDVAH 97

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R +  I+FGGGTP+ +E  ++A ++  +  ++ +S + E+T+E   +       Q +  
Sbjct: 98  KRKVDVIYFGGGTPTDLEKDDMASVIRSLFDHFDISPDAEVTVEGRNTGFTAEKGQAWVT 157

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG NR S+G+Q+   Q  + LGR  +  EA A ++   +    +  DL+Y LP QT  + 
Sbjct: 158 AGANRFSIGLQAANTQLRKKLGRLASREEAGATLNELADTGASVVIDLLYGLPGQT-EEI 216

Query: 188 EMELQRALS--YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITS 244
            +E  R +S    +  L LY+L +  G+   K  + G +  +P       L+        
Sbjct: 217 LIEDVRYISEQTRIAGLDLYELRMFPGSPLEKAIERGKMPAIPEFPEKARLFGAAYKNLI 276

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A G   +   +      E SL+N       D I  G  A  R+      + +S  +  +S
Sbjct: 277 AGGFDHFSPRHWRRTPNERSLYNRLAGEQTDMIPFGSAAGGRLGT----IGLSTARDIKS 332

Query: 304 WLKMVRKN 311
           + +MV + 
Sbjct: 333 YTEMVERG 340


>gi|304312675|ref|YP_003812273.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
 gi|301798408|emb|CBL46633.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
          Length = 461

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 116/241 (48%), Gaps = 15/241 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-----RS 70
           +  L VY+H PFC   C YC  N  + +    + +    +L  ++    L+ P     R 
Sbjct: 52  AKPLSVYIHIPFCKSLCYYCACNKIITQ----KTHRAVEYLDYLKREIALSAPLFDRSRK 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           ++ +  GGGTP+ +  + ++ ++  +  ++ +  S N E +IE +P +V++      R+ 
Sbjct: 108 LTQLHLGGGTPTYLTGEQLSELMACLRNHFNLDESDNHEFSIEVDPRTVDIERIADLRQQ 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S GVQ  +E   R + R  +  +    I  AR+  +  +S DLIY LP QT+  +
Sbjct: 168 GFNRLSFGVQDFDENVQRAVNRLQSEQQVYDLIAAARSAQYKSISVDLIYGLPLQTVASF 227

Query: 188 EMELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +  L + ++   D ++ Y    + +     +M +  D  +P     ++L  LT +  +A 
Sbjct: 228 DATLSKIIALRPDRIATYSYAHLPQMVRAQRMIRKED--MPPPERKIELLELTIARLTAA 285

Query: 247 G 247
           G
Sbjct: 286 G 286


>gi|149920929|ref|ZP_01909390.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
 gi|149818201|gb|EDM77656.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
          Length = 471

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 6/197 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF- 75
            +L VYVH PFC  +C +C+  +     +     ++ +   +M  + +  G     + F 
Sbjct: 70  RALFVYVHVPFCAVRCGFCNLFTQKHPPEELPARWLSTLFEQMDAVAEAVGVGQADTGFA 129

Query: 76  ---FGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVN 131
               GGGTP+ +E   +  +L  + + + V       ++E +P +   +       AG  
Sbjct: 130 RWALGGGTPTFLEAGALEALLVRLRERFGVDLPTTPSSVETSPETCTDDRLAVLEAAGTR 189

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQS  E SLR +GR   A  A+AA+   R   FP ++ DLIY +  QT   +  +
Sbjct: 190 RISIGVQSFAEASLRAVGRPQAAPLAVAALDRIRARSFPILNVDLIYGIAGQTPADFVAD 249

Query: 191 LQRALSYAVDHLSLYQL 207
           +  A+ +A + + LY L
Sbjct: 250 IDHAMRWAPEQVYLYPL 266


>gi|5106980|gb|AAD39908.1|AF119047_1 coproporphyrinogen oxidase homolog PhuW [Vibrio parahaemolyticus]
          Length = 420

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 4/216 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    L   +S    +
Sbjct: 60  NNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-AALMQELKEKAALPWTQSGIFHA 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR 
Sbjct: 119 VYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRF 178

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L 
Sbjct: 179 SFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLN 238

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             +S     L LYQL +        + + G +  P+
Sbjct: 239 DFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPA 274


>gi|325290215|ref|YP_004266396.1| Coproporphyrinogen dehydrogenase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965616|gb|ADY56395.1| Coproporphyrinogen dehydrogenase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 518

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 107/201 (53%), Gaps = 11/201 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRS---IS 72
           + +Y+  PFC  +C YC F         GQ++ I  +L+ +    +L G    R+   ++
Sbjct: 192 VSLYISVPFCPSRCSYCSFAFA---ESTGQDSTISGYLSALVREIELAGGLLTRTSFLVN 248

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVN 131
            ++ GGGTP++++   + ++L  I     ++ +VE T+EA  P ++        ++ GVN
Sbjct: 249 HLYIGGGTPTVLDSARLEILLKKIKAEIPLADDVEYTVEAGRPDTMNQEKLLCLKRYGVN 308

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+S+  QS+ + +LR +GR H   + +    LAR I    ++ D+I  LP +   + E  
Sbjct: 309 RLSINPQSMNDGTLRAIGRRHTVQDILDCYALAREIGDWIINMDIILGLPGEGPEEVEQT 368

Query: 191 LQRALSYAVDHLSLYQLTIEK 211
           ++  LS   D+L+++ +++++
Sbjct: 369 VRAVLSLKPDNLAVHAMSLKR 389


>gi|229514325|ref|ZP_04403786.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TMA 21]
 gi|229348305|gb|EEO13263.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TMA 21]
          Length = 455

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   +S    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQSGLFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  + + I  ++ +S++ EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPQQIRTLGETIRGSFPLSTDCEITLEGRIHRFSDEMFEQALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT T +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTATVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 303


>gi|218902082|ref|YP_002449916.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH820]
 gi|218536280|gb|ACK88678.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH820]
          Length = 495

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV EIT+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREITVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|328544832|ref|YP_004304941.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [polymorphum
           gilvum SL003B-26A1]
 gi|326414574|gb|ADZ71637.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Polymorphum
           gilvum SL003B-26A1]
          Length = 454

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
             L +Y+H PFC + C YC  ++   R       + ++   E++ +  +L   R +S I 
Sbjct: 45  TELSLYLHVPFCREICHYCGCHTKATRKDAPLIAYAKTLGREIELVAEKLGSARPVSHIH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +GGGTPSL+ PQ   L L G+ + ++ +S ++E  IE +P  V           GVNR S
Sbjct: 105 WGGGTPSLL-PQESLLELAGLLRVSFALSPDLEHAIELDPRLVSPGLAATLAAIGVNRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ ++    R +GR     + + A    RN     ++FDL+Y LP QT       + R
Sbjct: 164 LGVQDMDPVVQRAIGRVQPYDDVVRATDALRNAGITALNFDLMYGLPHQTSATILDTVAR 223

Query: 194 ALSYAVDHLSLY 205
            L  A   ++L+
Sbjct: 224 TLELAPSRIALF 235


>gi|288941408|ref|YP_003443648.1| coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
 gi|288896780|gb|ADC62616.1| Coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
          Length = 467

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 6/208 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            Y+H PFC   C +C F  +      G    E  ++    +     Q  GP  I +++ G
Sbjct: 69  AYLHIPFCESHCLFCGFYQNTWHESAGAVYAEALVEHLKRDRDRPYQAEGP--IQAVYVG 126

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+  + +A ++    ++  ++ + EIT+E     +E +  Q    AGVNR+S+GV
Sbjct: 127 GGTPTLLSTRELARVITAAREHLPLAPDCEITVEGRARDLEPDKAQALFDAGVNRLSIGV 186

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++   R LGR       +  +  L       +  DLIY LP QT   WE +++ A+ 
Sbjct: 187 QSFDQDVRRRLGRRTERGTLLRRLEDLVAADRGAVIVDLIYGLPGQTPEVWEEDVRTAIG 246

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             +D L LY L +   T      + G L
Sbjct: 247 LGLDGLDLYALKLMPQTPLAIAARAGKL 274


>gi|209966437|ref|YP_002299352.1| oxygen-independent coproporphyrinogen III oxidase [Rhodospirillum
           centenum SW]
 gi|209959903|gb|ACJ00540.1| oxygen-independent coproporphyrinogen III oxidase [Rhodospirillum
           centenum SW]
          Length = 450

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 10/202 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--T 66
           + M   G+ SL  Y+H PFC   C YC  ++ V  +      ++Q+   E++ +  L   
Sbjct: 40  SEMPADGTLSL--YLHIPFCRSMCWYCGCHTVVVPHDDPIRTYLQALTREIRTVSALLPA 97

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           GPR ++ + FGGGTP+LI     A +++G+ + +   ++ E+ IE +P ++         
Sbjct: 98  GPR-VTHLHFGGGTPTLIPADAFAELMEGMREAFRFDADAELAIEVDPRTLPEALPAVLA 156

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             G+NR SLGVQS +    + + R  +    +EA+A +  A      ++ DL+Y LP QT
Sbjct: 157 AGGINRASLGVQSFDPVVQKAINRFQSPEMTAEAVARLRAAG--IAGINLDLLYGLPHQT 214

Query: 184 MTQWEMELQRALSYAVDHLSLY 205
           +      ++ AL+   D LS++
Sbjct: 215 VESCIETVRTALTMDPDRLSVF 236


>gi|85860533|ref|YP_462735.1| coproporphyrinogen III oxidase [Syntrophus aciditrophicus SB]
 gi|85723624|gb|ABC78567.1| coproporphyrinogen oxidase (NAD) [Syntrophus aciditrophicus SB]
          Length = 432

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 12/197 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC + CPYC FN  V  ++ G+  ++  +   E++  R+         ++ GGG
Sbjct: 39  LYLHVPFCERLCPYCSFNRFV--FEEGRCRDYFSALRREIRLYRE--KGYDFGGVYVGGG 94

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++  + +   LD + + +++    E+++E NP+ +     +    AG+NR+S+G+QS
Sbjct: 95  TPTILLDE-LEETLDLVRRCFSIR---EVSVETNPNHLVPEKLERLSSAGINRLSVGIQS 150

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+ + R+    + +E I  +  A+  F  ++ D+I+  P Q M   + +L   L 
Sbjct: 151 FNDGLLKAMDRHDKYGSGAEIIERLRQAQGRFDTLNADMIFNFPSQEMAMLDRDLDILLE 210

Query: 197 YAVDHLSLYQLTIEKGT 213
             VD ++ Y L +   T
Sbjct: 211 LGVDQITWYPLMVSDST 227


>gi|168187216|ref|ZP_02621851.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
 gi|169294870|gb|EDS77003.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
          Length = 414

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 106/203 (52%), Gaps = 10/203 (4%)

Query: 7   YENNMTGQGSNSL---GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + N++ G+   S+   GVYVH PFC   CP+C +N  V+  K     + ++ + E+    
Sbjct: 19  FTNDVVGETELSMKEFGVYVHIPFCKTLCPFCPYNK-VKYDKKLAFKYKKALINEINLAG 77

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +  G ++I+SI+FGGGTP+L+  +++  I++ I +N+ V  N  I IE +P+ +  +   
Sbjct: 78  KKHGEKNITSIYFGGGTPALM-LESLGEIVETIKQNFKVKCN--IGIELHPTDINEDMLG 134

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             +  G N IS+G+QS  ++ L  L R +   +  + + L +   F  +  DLI+ +  Q
Sbjct: 135 KLKDIGFNMISVGIQSFNKKCLDNLEREY--IDGASKVKLVKEAGFKVVDVDLIFGIKDQ 192

Query: 183 TMTQWEMELQRALSYAVDHLSLY 205
              Q + +   A +     +S Y
Sbjct: 193 DEEQIKNDFYTAFNVGATQVSTY 215


>gi|206561440|ref|YP_002232205.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia J2315]
 gi|198037482|emb|CAR53418.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia J2315]
          Length = 463

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R +
Sbjct: 51  GASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMALQAALFDPSRPV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    ++++++  ++ E +IE +P +V        R  G
Sbjct: 111 TQLHWGGGTPTFLSDDETAELMAATREHFSLAPDTDAEFSIEIDPRTVTPATLVHLRTIG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY LP QT+  + 
Sbjct: 171 FNRLSLGVQDFDPVVQQAINRIQPLAMTADLLGAARATGFHSVSVDLIYGLPHQTVAVFA 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LP     + L  L   + ++ G
Sbjct: 231 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPPPETRIALLGLAIDMLTSAG 288


>gi|110347097|ref|YP_665915.1| coproporphyrinogen III oxidase [Mesorhizobium sp. BNC1]
 gi|110283208|gb|ABG61268.1| coproporphyrinogen III oxidase, anaerobic [Chelativorans sp. BNC1]
          Length = 451

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
           + + +Y+H PFC   C YC  ++ + R      +++     E++ + +LT P+  +S++ 
Sbjct: 46  DPVSLYLHIPFCRSMCWYCGCHTTITRQDAPILDYLVVLREEIRMVAELTPPQLGVSAVH 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP++I P     ++  +  N+  +    + IE +P ++           G+ R SL
Sbjct: 106 FGGGTPTIIAPAEFLALMALLRCNFDFTDTAAVAIEIDPRTLTAEMAATLGATGIGRASL 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +    + + R     +  AA+  L R     ++FDLIY LP QT+         A
Sbjct: 166 GVQSFDPIVQKAVNRIQTPEQTTAAVLDLRRAGVAEINFDLIYGLPHQTVRSCVETANIA 225

Query: 195 LSYAVDHLSLY 205
           ++   D  +++
Sbjct: 226 VTMRPDRFAVF 236


>gi|260432396|ref|ZP_05786367.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416224|gb|EEX09483.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 451

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 10/195 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----SI 71
           +S+ +YVH PFC + C +C      R      +N + +++  ++    L   R     ++
Sbjct: 49  SSISLYVHVPFCRRLCWFC----ACRTQGTQTDNPVIAYVDVLKAELDLLAARLPAGVTL 104

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S + +GGGTP+L+ P  +  +   I     +  N E ++E +P+ V+        +AG+N
Sbjct: 105 SRLHWGGGTPTLLNPDLMRELAAHILGIVPLGPNAEFSVEIDPNEVDAARLDALAEAGMN 164

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R S+GVQ  +++  + +GR  +      AI + R    P ++ D++Y LP QT  +    
Sbjct: 165 RASIGVQDFDDEIQKTIGRIQSYDTTREAIDMIRERGVPSLNADILYGLPHQTKARMTES 224

Query: 191 LQRALSYAVDHLSLY 205
           +Q+ LS + D ++LY
Sbjct: 225 VQKLLSLSPDRVALY 239


>gi|257093716|ref|YP_003167357.1| coproporphyrinogen III oxidase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046240|gb|ACV35428.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 465

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 4/230 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRS 70
           G  S  L +Y H PFC   C YC  N  + +       +++    E+         G + 
Sbjct: 53  GAISRQLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLRYLAKELTLQSSYLEGGDQE 112

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ + +GGGTP+ +    +  ++    K++ +    E +IE +P  V+    +   + G 
Sbjct: 113 VAQLHWGGGTPTFLSHDEMRQLMAATRKHFRLIEGGEYSIEVDPRKVDRATVELLAELGF 172

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ  +    + + R  + +E  A I  AR   F  +S DLIY LPKQ++  +  
Sbjct: 173 NRMSVGVQDFDAGVQQAVNRVQSEAETCAVIDAARAAGFRSISVDLIYGLPKQSLEGFTR 232

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            L+R ++ + D +S+Y       +LF    +  +  +PS +  + + +L 
Sbjct: 233 TLERVIAVSPDRVSIYNYA-HLPSLFKPQRRILEADMPSADARLQILSLA 281


>gi|332886046|gb|EGK06290.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           mossii DSM 22836]
          Length = 455

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 1/190 (0%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           Q    + +Y+H PFC   C YC  NS + + K   + +I++   E++ +  L    R IS
Sbjct: 44  QNPQHISIYIHIPFCYHMCYYCGCNSQLLKDKNVVKEYIETLKKEIRMVLPLLDHSRKIS 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I +GGGTP+      +  I   I   +    N EI IE +P  ++ + +     AG NR
Sbjct: 104 QIHYGGGTPTSQPVSVLKEINRIILSEFECIENPEIAIECHPGYLDEDYWNDLINAGFNR 163

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+G+Q   E+ L+   R  +       IH+ R+    ++ D IY LP QT   +   ++
Sbjct: 164 ISIGIQDFNEEVLKASARKPSRMAIEDIIHILRSKGISVNMDFIYGLPLQTPESFAETIR 223

Query: 193 RALSYAVDHL 202
           +A+S   D +
Sbjct: 224 KAISLKPDRI 233


>gi|227873342|ref|ZP_03991603.1| possible coproporphyrinogen oxidase [Oribacterium sinus F0268]
 gi|227840820|gb|EEJ51189.1| possible coproporphyrinogen oxidase [Oribacterium sinus F0268]
          Length = 557

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQ 64
           AY  N+    S    +Y++ PFC  +C YC F S  +  +      ++     EM ++ +
Sbjct: 194 AYGKNI----SEGYSLYINIPFCPTRCAYCSFLSMPMGSFSERMPKYLSLLEEEMLFVLR 249

Query: 65  LTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEAN-PSSVE 118
             G +    + SI+ GGGTP+ +  +++ ++L  + K+        +E T+EA  P S+ 
Sbjct: 250 EMGEKRGKQLQSIYIGGGTPTALGEKDLEILLSLVDKHCFSKGKGAIEYTVEAGRPDSIN 309

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  +   V+RIS+  QS  ++SL  +GR H+  E      LAR + F  ++ DLI 
Sbjct: 310 REKLKLLQDFSVDRISINPQSFHQKSLDIIGRKHSVEEVKEKYSLARELGFDNINMDLIL 369

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            LP + + Q E  L   L  A D L+++ L +++  
Sbjct: 370 GLPGEHLQQVEESLSEILRLAPDSLTVHSLAVKRAA 405


>gi|217978694|ref|YP_002362841.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
 gi|217504070|gb|ACK51479.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
          Length = 451

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/401 (21%), Positives = 165/401 (41%), Gaps = 43/401 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           +  Y+H PFC   C YC  ++   R       ++ + L E+      L G   +  + +G
Sbjct: 52  VSAYLHIPFCTDLCWYCGCSTKATRRYEPVAAYVDTLLAEIDAAAAALPGKMRLDHLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P ++ P +I  +   + + + +    E  +E +P  +       + +AGV R+SLGV
Sbjct: 112 GGSPDILSPADIERLTGALNRCFAIEPGAEFAVEIDPRLMSGQKASAFVRAGVTRVSLGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q  +E     +GR  + +    A+ L  AR +   ++ DL+Y LP+Q++      + + L
Sbjct: 172 QDFDEDVQEAIGRIQSFAATKEAVDLFRARGVG-SVNIDLVYGLPRQSVASLSRTVDQVL 230

Query: 196 SYAVDHLSLY-----------QLTIEKGTL------FYKMHKDGDLVLPSENVAVDLYNL 238
           S + D ++L+           Q  I++  L      F +     D +  +  VA+ + + 
Sbjct: 231 SLSPDRIALFGYAHLPHRMRNQRLIDEAALPPPLERFAQARAAADGLRRAGYVALGIDHF 290

Query: 239 TQSITS-AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            +   S A G        ++  G E+L           IG G  A  R+  G  + A ++
Sbjct: 291 AKPSDSLAAGKLNRNFQGYTADGCETL-----------IGFGASAIGRLPQGFAQNAPTV 339

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI- 356
                 +  +V   G A V    L+ + +   +++  L     +   D E   G   +  
Sbjct: 340 ----GVYAALVEAQGLATVRGFALTPDDRLRAYVIERLMCDFSLEAGDLERRFGAAAEPI 395

Query: 357 --ECERNLQ--RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             E E  ++   +GF+ER      R T+RG   +  + A  
Sbjct: 396 LREAEAIVRDDAEGFVERAP-DGFRLTERGKPFVRHICARF 435


>gi|210623797|ref|ZP_03294057.1| hypothetical protein CLOHIR_02008 [Clostridium hiranonis DSM 13275]
 gi|210153379|gb|EEA84385.1| hypothetical protein CLOHIR_02008 [Clostridium hiranonis DSM 13275]
          Length = 522

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SI 71
               + +YV  PFC  +C YC F S+ +++Y   +  +++  L E +   ++   R   I
Sbjct: 193 SDKKISLYVSIPFCPTRCYYCSFPSNSIQKYGNLRRKYVERLLDEARGTAEIIKNRGWKI 252

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            + + GGGTP+ ++ +++  +++ + + +  S   E T+EA  P ++     +  +K GV
Sbjct: 253 ETFYIGGGTPTALDAEDMDYMIENLFEIFDFSKIKEFTVEAGRPDTITEEKLRVLKKHGV 312

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+  Q++ + +L  +GR H+  +      +AR + F  ++ D+I  L  +     + 
Sbjct: 313 NRISINPQTMNDSTLEKIGRKHSVEDIKTCFKMARELGFDNINMDIILGLVDEDAEMVKN 372

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            L+     + + L+++ L I++ +   K++ D D
Sbjct: 373 TLEEIKKLSPESLTVHTLAIKRAS---KLNMDMD 403


>gi|332307656|ref|YP_004435507.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332174985|gb|AEE24239.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 465

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +L +YVH PFC + C YC  N  V R +   + ++   L E+    ++ G + ++ + 
Sbjct: 59  NKTLSLYVHIPFCHRLCYYCGCNKIVTRLQSKADIYLDYLLKEIALQAEVLGHKPVTQLH 118

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  ++DG+  ++  + + +++IE +P ++         K G NR+S+
Sbjct: 119 LGGGTPNFLTDAQLQRLVDGLKGHFNFTDDAQLSIEIDPRNMTPQRIDSMAKMGFNRLSI 178

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +      + R  ++      I  A+   F  ++ DLIY LP QT   +     R 
Sbjct: 179 GIQDTDPTVQEAINRVQSSELIERLIKRAKEKGFRSINLDLIYGLPFQTPDTFA----RT 234

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
           L +      ++++ IE+ +LF   H
Sbjct: 235 LDF------VHKMQIERVSLFSYAH 253


>gi|330831496|ref|YP_004394448.1| Coproporphyrinogen III oxidase oxygen-independent [Aeromonas
           veronii B565]
 gi|328806632|gb|AEB51831.1| Coproporphyrinogen III oxidase oxygen-independent [Aeromonas
           veronii B565]
          Length = 457

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 2/218 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +YVH PFC K C YC  N  + R++   + ++     E++    L   R ++ + +G
Sbjct: 52  NLSLYVHIPFCHKLCYYCGCNKVITRHQHKADEYLDYLEQEIKAQAPLFKHRMVTQLHWG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++      ++  + +++  +   E +IE +P  + +      R  G NRISLGV
Sbjct: 112 GGTPTYLDEAQTRRLMAMLREHFHFAEEGEFSIEVDPREIAITMLDVLRDVGFNRISLGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     + R  +     A +  AR + F   + DLIY LP Q    +   L+  L 
Sbjct: 172 QDFNKDVQVAVNREQDNDFIKAMLERARELGFRSTNLDLIYGLPHQDRASFHHTLEEVLK 231

Query: 197 YAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAV 233
                LS++    +       +  K+ D+  P E +A+
Sbjct: 232 TDPARLSIFNYAHLPSRFAAQRKLKEVDMPAPQEKLAM 269


>gi|109897429|ref|YP_660684.1| coproporphyrinogen III oxidase [Pseudoalteromonas atlantica T6c]
 gi|109699710|gb|ABG39630.1| coproporphyrinogen III oxidase, anaerobic [Pseudoalteromonas
           atlantica T6c]
          Length = 455

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 105/200 (52%), Gaps = 6/200 (3%)

Query: 10  NMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N   Q  N +L +YVH PFC   C YC  N  V + +     +++  + E++   +  G 
Sbjct: 42  NAAEQSDNKNLSLYVHIPFCHYLCYYCGCNKIVTQLQTKANVYLKHLIEEIKQQAKHFGA 101

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           ++++ + FGGGTP+ +    +  +++ +  ++  +++ +I+IE +P  + V         
Sbjct: 102 KAVTHLHFGGGTPNFLTDDQLLQLMNELKTHFYFTTDAQISIEIDPRDMTVGRIDAMADM 161

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI---FPRMSFDLIYALPKQTMT 185
           G NR+S+G+Q  + +  + + R   ++E IA++ +AR     F  ++ DLIY LP QT  
Sbjct: 162 GFNRLSIGLQDTDPKVQKAINRVQ-STELIASL-VARAKERHFRSVNLDLIYGLPFQTPE 219

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +   L+   +  V+ +SL+
Sbjct: 220 SFANTLEAVHAMQVERVSLF 239


>gi|315125379|ref|YP_004067382.1| coproporphyrinogen III oxidase [Pseudoalteromonas sp. SM9913]
 gi|315013892|gb|ADT67230.1| coproporphyrinogen III oxidase [Pseudoalteromonas sp. SM9913]
          Length = 457

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 16/298 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +SA E++ T     SL +Y+H PFC + C YC  N  + R++   + ++     E+    
Sbjct: 41  ISAIESSQT----RSLSLYIHIPFCSQLCYYCGCNKVITRHQSKADTYLDFLAKEIAAQA 96

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     +  +  GGGTP+ +    +  ++  + +++  S   E  IE +P S+  N   
Sbjct: 97  PLFQDYRVEQLHLGGGTPTFLTAAQMTRLVTLLEQHFNFSDTCERGIEIDPRSLADNMLV 156

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
              + G NR+S G+Q   +Q    + R  +  E    I  A+ + F  ++ D+IY LP Q
Sbjct: 157 DLSELGFNRVSFGIQDFNDQVQLAVNRPQHVDEVKQLITQAKQLGFKSINADMIYGLPLQ 216

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQS 241
           T   +   +++ ++   D +S++         F    K  D  LPS +  + ++ N  + 
Sbjct: 217 TPESFTQTIEQLIALNPDRVSVFNYA-HLPERFAAQRKIKDADLPSAHNKLTMFKNTLEQ 275

Query: 242 ITSAH----GLHAYEISNHSFLGAESLHNLN-----YWRYGDYIGIGPGAHSRVKVGS 290
           +T A     G+  +   ++    A++ + L+     Y  +G+   +G G  S  ++G+
Sbjct: 276 MTQAGYQFIGMDHFAKVDNELAIAQNTNQLHRNFQGYTTHGECDLLGLGVSSISQIGT 333


>gi|229028668|ref|ZP_04184781.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1271]
 gi|229095505|ref|ZP_04226493.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-29]
 gi|228687911|gb|EEL41801.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-29]
 gi|228732631|gb|EEL83500.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1271]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|291542889|emb|CBL15999.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Ruminococcus bromii L2-63]
          Length = 479

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 22/240 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSISS 73
           S  +YV  PFC  +C YC F  + + R +   E + +    E++   ++    G R + +
Sbjct: 155 SFSLYVGIPFCPSRCSYCSFVMASIERAEKLIEPYTKLLCEEIKRTAEIANKLGLR-LET 213

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++FGGGTP+ +  + +  +L  +  ++ +S+  E T+EA  P ++++      ++  V+R
Sbjct: 214 VYFGGGTPTTLSAEQLDTVLGTVNNSFDMSTCREFTVEAGRPDTIDIAKLFALKENKVDR 273

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  Q++  + L+ +GR H A +   A  LAR   F  ++ DLI  LP  T   ++  L
Sbjct: 274 ISINPQTVNNEVLKTIGRKHTAQQFFDAFELARKCGFDNINTDLIAGLPTDTTESFKNSL 333

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              +    + ++++ L +++ +            L +E V +DL    Q    A  + AY
Sbjct: 334 DSIVRLNAECITVHTLCMKRASR-----------LTTEGVTLDL----QQARDAREMLAY 378


>gi|196037552|ref|ZP_03104863.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus NVH0597-99]
 gi|196031794|gb|EDX70390.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus NVH0597-99]
          Length = 495

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|165871924|ref|ZP_02216566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0488]
 gi|167635902|ref|ZP_02394210.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0442]
 gi|170687667|ref|ZP_02878883.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0465]
 gi|170708260|ref|ZP_02898705.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0389]
 gi|190566758|ref|ZP_03019675.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis Tsiankovskii-I]
 gi|227816258|ref|YP_002816267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. CDC 684]
 gi|229602992|ref|YP_002865448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0248]
 gi|301052526|ref|YP_003790737.1| coproporphyrinogen III oxidase [Bacillus anthracis CI]
 gi|164712355|gb|EDR17890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0488]
 gi|167528719|gb|EDR91478.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0442]
 gi|170126781|gb|EDS95663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0389]
 gi|170668480|gb|EDT19227.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0465]
 gi|190562310|gb|EDV16278.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis Tsiankovskii-I]
 gi|227006503|gb|ACP16246.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. CDC 684]
 gi|229267400|gb|ACQ49037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0248]
 gi|300374695|gb|ADK03599.1| coproporphyrinogen III oxidase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 495

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|237738144|ref|ZP_04568625.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420024|gb|EEO35071.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 471

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 140/303 (46%), Gaps = 29/303 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRS--ISSI 74
           + +Y+  PFC  KC YC F S+     VG+   +F+++ L E++   +     +  ISS+
Sbjct: 148 INLYIGIPFCPTKCKYCSFASYEIGSGVGRYYNDFVKTLLDEIELTGKFLREENFKISSL 207

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS +  +++  +L  +  +  +S   E T EA    ++     +  +K GV+RI
Sbjct: 208 YIGGGTPSTLIEKDLEDVLKAVNTHIDMSDVREFTFEAGREDTLTDEKLEIAKKYGVDRI 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+ + ++LR + R  +          A+ +   ++ D+I  LP +T       L  
Sbjct: 268 SLNPQTFKVETLRKVNRKFDRENFEKYFKKAKELGFIVNMDIIVGLPDETTEDILYTLGE 327

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI------TSAHG 247
              + +++L+++ L  ++ +  +K  +D         V +D   +T++I         H 
Sbjct: 328 LEKFDIENLTIHTLAFKRASNLFKESQD--------RVELDGKTITEAIKRLVEKKDIHP 379

Query: 248 LHAYEISN---------HSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISI 297
            + Y   N         +S LG ES+ N+         +G+G GA +++ +  +     I
Sbjct: 380 YYMYRQKNIMEWGENIGYSKLGCESVFNIEMIEENQSTMGLGGGAITKIVIPENEYRDYI 439

Query: 298 EKH 300
           E++
Sbjct: 440 ERY 442


>gi|196046985|ref|ZP_03114205.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB108]
 gi|225862839|ref|YP_002748217.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB102]
 gi|196022214|gb|EDX60901.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB108]
 gi|225789844|gb|ACO30061.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB102]
          Length = 495

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|196035258|ref|ZP_03102664.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus W]
 gi|195992322|gb|EDX56284.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus W]
          Length = 495

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|325265721|ref|ZP_08132410.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
 gi|324982852|gb|EGC18475.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
          Length = 505

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 4/207 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   +N + G    ++ +YVH PFC   C YC  N  + +     + ++     EM  
Sbjct: 46  EYIQVLDNTLNG-NEKAVSLYVHIPFCNVICYYCGCNKVITKDTRKADEYLTYLEKEMAL 104

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           ++  L G   ++ + FGGGTP+ +  + +  +   I +++ +  + E +IE +P  V   
Sbjct: 105 LKPHLHGRHKLAQLHFGGGTPTFLSDEQLERVFRMIGEHFELMPDGEYSIEIDPRKVSRE 164

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
           +     K G NR+S+G+Q  + +    + R     E    I  AR+  F  +S DLIY L
Sbjct: 165 SVFKLAKLGFNRMSVGIQDFDPKVQAAVNRIQTVEETQNVIEAARDAGFKSISVDLIYGL 224

Query: 180 PKQTMTQWEMELQRAL-SYAVDHLSLY 205
           P Q++   +  L   L +   D ++LY
Sbjct: 225 PHQSVESIKPTLDTVLNALNPDRIALY 251


>gi|152974529|ref|YP_001374046.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023281|gb|ABS21051.1| Coproporphyrinogen dehydrogenase [Bacillus cytotoxicus NVH 391-98]
          Length = 495

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------SIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEIREIGAFLKEKGIKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEQMYESFPNVENVREVTVEAGRPDTITPEKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARKMGMNNINMDLIIGLPGEGLEIFQH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLAETEKLMPESLTVHTLSFKRAS 371


>gi|322382952|ref|ZP_08056784.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153072|gb|EFX45530.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 510

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 29/294 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGP------ 68
            + + +Y+  PFC  KC YC F +    Y + G    + +FL  +    +LTG       
Sbjct: 173 DHEVSLYIGIPFCPTKCAYCTFPA----YDIQGNNGSVHAFLEGLHEEIRLTGEWLKRHG 228

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYR 126
             I++I++GGGTP+ +E +++  +   + K+      V E+T+EA  P ++  +  +  +
Sbjct: 229 MGITTIYWGGGTPTSLEAEDMDALFRTMQKHLPQMDKVRELTVEAGRPDTITPDKLEVMK 288

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +  V+RIS+  QS  + +L  +GR+H   E +    L+R +    ++ DLI  LP + + 
Sbjct: 289 RWDVDRISINPQSFTQLTLDTIGRHHTVKETVDKFKLSRQLGMNNINMDLIIGLPGEGVA 348

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + E  L+       + L+++ L+ ++ +   K  +D   V+    +AV +    +  T  
Sbjct: 349 ELEGTLEETAKLLPESLTVHTLSFKRASKMTK-QRDQYEVVGRREIAVMMQKAVE-WTKQ 406

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV 286
           H    Y            E   +S  G ESL+N+        I G+G GA S++
Sbjct: 407 HQYVPYYLYRQKNILGNLENVGYSLEGKESLYNIVMMEERQTILGLGCGAISKI 460


>gi|237752345|ref|ZP_04582825.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229375834|gb|EEO25925.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 453

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 9/196 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQ-LTGPRSI 71
           +N L +YVH PFC   C +C  N     Y   +EN   +++    E+  +   +   + I
Sbjct: 43  TNPLSLYVHLPFCRSACYFCGCNV---IYTSKEENKILYLEYLKKELALLENAMDTQKPI 99

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             + FGGGTP+      +  ++  + K +   S + EI  E +P    +   +  +  G 
Sbjct: 100 YQLHFGGGTPTFFSASELEFLIALLKKTFPNFSDDAEIACEIDPRFFSLEQMRALKNGGF 159

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S G+Q  +E   R + R    S    +I++ARN     ++FDLIY LP QT+  ++ 
Sbjct: 160 NRLSFGIQDFDENVQRAIHRIQPFSLVQDSINIARNFGVTSINFDLIYGLPFQTLDTFKN 219

Query: 190 ELQRALSYAVDHLSLY 205
            L+ AL    D  +++
Sbjct: 220 TLELALKLNPDRFAIF 235


>gi|78065490|ref|YP_368259.1| coproporphyrinogen III oxidase [Burkholderia sp. 383]
 gi|77966235|gb|ABB07615.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia sp. 383]
          Length = 463

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 7/250 (2%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            ++     EM  
Sbjct: 42  DYLRAASD--PGASSSELSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLDQLKREMAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDDETAELMAATREHFALAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPVVQQAINRIQPLAMTADLLSAARTTGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVSVFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHG 247
           L   + ++ G
Sbjct: 279 LAIDMLTSAG 288


>gi|319902571|ref|YP_004162299.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
 gi|319417602|gb|ADV44713.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
          Length = 455

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 1/201 (0%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A E +    G++ +  Y+H PFC   C YC  NS+        E ++ +   E+  +
Sbjct: 33  YQEAIEKSNQVSGNSHISFYLHIPFCHHLCYYCGCNSYPMMNAGMIEKYVSAMHQEIDLL 92

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L  P R IS I +GGG+P+ I P  I  + + +   +    + EI IE +P  +   +
Sbjct: 93  IPLLNPQRLISQIHYGGGSPTAIPPHFIKELNEHLLSAFRTIESPEIAIECHPGYLSHQD 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           +Q     G NR S+GVQ L ++ L  + R            L RN    ++ D +Y LP+
Sbjct: 153 WQELAACGFNRFSIGVQDLNKRVLETVNRRPPLIPLNEIFFLLRNEGASINLDFLYGLPE 212

Query: 182 QTMTQWEMELQRALSYAVDHL 202
           QT   +   ++ A+  A D L
Sbjct: 213 QTAASFLHTIESAIDLAPDRL 233


>gi|228944609|ref|ZP_04106979.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228815069|gb|EEM61320.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|159043094|ref|YP_001531888.1| coproporphyrinogen III oxidase [Dinoroseobacter shibae DFL 12]
 gi|157910854|gb|ABV92287.1| oxygen-independent coproporphyrinogen III oxidase [Dinoroseobacter
           shibae DFL 12]
          Length = 454

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 2/173 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
             S  + +YVH PFC + C YC  N  + + +     ++++ L E+  +R  + G   ++
Sbjct: 47  DASEPISLYVHIPFCREMCWYCGCNMKLVKREGPLAEYVETLLKEIALVRAAMPGRVPVA 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+ + P  IA I+D +  ++ +  + EI IE++P ++         + G NR
Sbjct: 107 HLHWGGGTPTALSPDQIARIMDALRASFDILPDAEIAIESDPRTLTEPMVARLAELGFNR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTM 184
            S GVQ  + +  R + R         A+ +  R+    ++FDLIY LP Q++
Sbjct: 167 ASFGVQEFDPKVQRAINRIQPPEMVAKAVGMFRRHGIAAVNFDLIYGLPYQSV 219


>gi|294675708|ref|YP_003576323.1| oxygen-independent coproporphyrinogen-III oxidase [Rhodobacter
           capsulatus SB 1003]
 gi|294474528|gb|ADE83916.1| oxygen-independent coproporphyrinogen-III oxidase-1 [Rhodobacter
           capsulatus SB 1003]
          Length = 460

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 6/213 (2%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  M    S     YVH PFC   C +C F  +  R  +G  +++ + + +++   +
Sbjct: 52  ATWDRLMATPRSRRAVAYVHIPFCENHCLFCGFYQNAWRPDLG-TSYVDALIAQLRGFAR 110

Query: 65  LT---GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                GP  + +++ GGGTP+ +   +IA ++  +  +  ++ + EIT+E    S  +  
Sbjct: 111 HPAQEGP-PLQAVYLGGGTPTALSAPDIARLVRALRSHLPLAPDCEITLEGRVHSFGLEK 169

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALP 180
            +    AGV RISLGVQS  +   R LGR  + +E + A+  L       +  DLIY LP
Sbjct: 170 ARAAFDAGVTRISLGVQSFSDAIRRPLGRKASRAEILQALQGLVTLDQGAVIVDLIYGLP 229

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            Q+      +++      +D L LY L +  GT
Sbjct: 230 GQSPEDVAADVRLCADLGLDGLDLYALNLIPGT 262


>gi|170732237|ref|YP_001764184.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia MC0-3]
 gi|169815479|gb|ACA90062.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia MC0-3]
          Length = 463

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R +
Sbjct: 51  GASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMALQAALFDPSRPV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V        R  G
Sbjct: 111 TQLHWGGGTPTFLSDDETAELMAATREHFALAPDADAEFSIEIDPRTVTPATLVHLRTIG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY LP QT+  + 
Sbjct: 171 FNRLSLGVQDFDPVVQQAINRIQPRAMTADLLAAARATGFHSVSVDLIYGLPHQTVAVFA 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LP     + L  L   + ++ G
Sbjct: 231 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDAALPPPETRIALLGLAIDMLTSAG 288


>gi|228984066|ref|ZP_04144253.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228775665|gb|EEM24044.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|49476951|ref|YP_035121.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118476521|ref|YP_893672.1| coproporphyrinogen III oxidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|49328507|gb|AAT59153.1| coproporphyrinogen oxidase, anaerobic [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|118415746|gb|ABK84165.1| coproporphyrinogen III oxidase, anaerobic [Bacillus thuringiensis
           str. Al Hakam]
          Length = 498

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 174 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 231 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 291 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 351 TLDETEKLMPESLTVHTLSFKRAS 374


>gi|229101628|ref|ZP_04232350.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-28]
 gi|229114455|ref|ZP_04243872.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-3]
 gi|229171646|ref|ZP_04299221.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus MM3]
 gi|228611792|gb|EEK69039.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus MM3]
 gi|228668997|gb|EEL24422.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-3]
 gi|228681789|gb|EEL35944.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-28]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|47564821|ref|ZP_00235865.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
 gi|47558194|gb|EAL16518.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|146282193|ref|YP_001172346.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri A1501]
 gi|145570398|gb|ABP79504.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
          Length = 460

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 9/234 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           Q S  L +YVH PFC   C YC  N  + + +   + +++    E++ +   L   + + 
Sbjct: 49  QASRPLSLYVHLPFCANVCYYCGCNKIITKDRGRAQPYLERLEKEIELISCHLGKDQLVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + +++ +  +   + +IE +P   +       R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRRLMKHLRQHFNLQDDDHGDFSIEVDPREADWPTIGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+GVQ L+ +  R + R     +    I  AR + +  ++ DLIY LP QT  ++  
Sbjct: 169 NRISIGVQDLDPEVQRAINRMQTLEQTRTIIEAARTLQYRSLNIDLIYGLPLQTPARFAK 228

Query: 190 ELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++  +    D LSL+    + +     +     DL  P+E +A+    L QSI
Sbjct: 229 TVEAIIDLQPDRLSLFNYAHLPERFAPQRRINASDLPAPAEKLAM----LEQSI 278


>gi|30261010|ref|NP_843387.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Ames]
 gi|47526162|ref|YP_017511.1| coproporphyrinogen III oxidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65318289|ref|ZP_00391248.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Bacillus anthracis str. A2012]
 gi|229089931|ref|ZP_04221185.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-42]
 gi|254682930|ref|ZP_05146791.1| coproporphyrinogen III oxidase [Bacillus anthracis str. CNEVA-9066]
 gi|254725717|ref|ZP_05187499.1| coproporphyrinogen III oxidase [Bacillus anthracis str. A1055]
 gi|254740009|ref|ZP_05197701.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Kruger B]
 gi|254753348|ref|ZP_05205384.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Vollum]
 gi|254758446|ref|ZP_05210473.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Australia
           94]
 gi|300119261|ref|ZP_07056955.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
 gi|30254624|gb|AAP24873.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. Ames]
 gi|47501310|gb|AAT29986.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|228693387|gb|EEL47094.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-42]
 gi|298723369|gb|EFI64117.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|228932288|ref|ZP_04095171.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229154577|ref|ZP_04282694.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 4342]
 gi|228628975|gb|EEK85685.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 4342]
 gi|228827356|gb|EEM73107.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|228926043|ref|ZP_04089123.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229120505|ref|ZP_04249751.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 95/8201]
 gi|229183196|ref|ZP_04310426.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BGSC 6E1]
 gi|228600335|gb|EEK57925.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BGSC 6E1]
 gi|228662921|gb|EEL18515.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 95/8201]
 gi|228833617|gb|EEM79174.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|229159943|ref|ZP_04287949.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus R309803]
 gi|228623535|gb|EEK80355.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus R309803]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLEIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|324324915|gb|ADY20175.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|228913554|ref|ZP_04077183.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228846141|gb|EEM91163.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 496

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|327438744|dbj|BAK15109.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046]
          Length = 500

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 140/290 (48%), Gaps = 27/290 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQ-ENFIQSFLTEMQWMRQLTGPRS--ISS 73
           + +Y+  PFC   C YC F ++      K G+ E FI     E++ M +    ++  I+S
Sbjct: 174 ISIYIGVPFCPTMCAYCTFPAYAIQSNRKAGRVEKFIDGLHIELREMGKWLTEKNMRITS 233

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGVN 131
           I++GGGTP+ IE   +  +   +   +    ++ EIT+EA  P ++     +  +K G++
Sbjct: 234 IYWGGGTPTSIEAHEMDALYKTMFDAFPNPESIREITVEAGRPDTITPEKIEVLKKWGID 293

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L+ +GR+H   E +    L+RN     ++ DLI  LP + + ++E  
Sbjct: 294 RISVNPQSYTQETLKAIGRHHTVEETVEKFWLSRNSGMNNINMDLIIGLPNEGIEEFEHS 353

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  +     + L+++ L+ ++ +   + +KD   V   + V   +  +    T+ +G   
Sbjct: 354 LAESAKMQPESLTVHTLSFKRASEMTR-NKDKYKVADRDTVG-KMMQMATDWTAENGYVP 411

Query: 251 YEI-SNHSFLGAESLHNLNYWRYGD--------------YIGIGPGAHSR 285
           Y +    + LG  +L N+ Y +  +               +GIG GA S+
Sbjct: 412 YYLYRQKNILG--NLENVGYCKPEEESIYNIVIMEEVQTILGIGCGASSK 459


>gi|312898876|ref|ZP_07758264.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310620038|gb|EFQ03610.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 481

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 46/307 (14%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQL---T 66
           +    +YV  P+C   C YC F S +    VG E      +F    + ++Q +++L   T
Sbjct: 154 TRDAALYVGIPYCASHCLYCSFPSRL----VGNEKAERLLDFTNKLIEDIQDVQRLCSDT 209

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALI------LDGIAKNWTVSSNVEITIEANPSSVEVN 120
           G R I SI+ GGGTP+ +  + +  I      L G  + WTV +         P ++   
Sbjct: 210 GIR-IDSIYVGGGTPTSLSVEAVERIMSALQPLAGACREWTVEA-------GRPDTMTEE 261

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R  GV+RIS+  Q++++  L  LGR H   +        R+  F  ++ D I  L
Sbjct: 262 KARILRAYGVDRISINPQTMQQHLLDALGRRHTVRDIYRMFDYCRDAGFSVINTDFIAGL 321

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+      L+     A ++++++ L ++KG   ++     +  +P   V  ++    
Sbjct: 322 PGQTVEDMRQNLEAVCQLAPENVTIHTLALKKGAPLFRHTLREE--IPPVQVVEEMVTSA 379

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           +      G   Y +    ++ AE   N+ Y + G                +G+GPG+ ++
Sbjct: 380 EESLCRQGYAPYYLYRQQYMAAE-FANIGYAKDGTISRYNIEMMEERQTVLGVGPGSATK 438

Query: 286 VKVGSHR 292
             V  HR
Sbjct: 439 FIV-PHR 444


>gi|261212954|ref|ZP_05927238.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
 gi|260838019|gb|EEX64696.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
          Length = 453

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 10/242 (4%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           +Y+H PFC  +C +C+F  N+  R+     + +  + L E++    L   ++    +++ 
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAACRQLV---DAYFAALLVEIKQKAALPWTQTGVFHAVYI 120

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + PQ I  +   I  ++ +S++ EIT+E          F+   + G NR S G
Sbjct: 121 GGGTPTELSPQQIRTLGKAIRDSFPLSTDCEITLEGRIHRFSDEMFEQALEGGFNRFSFG 180

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +
Sbjct: 181 VQSFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFM 240

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEIS 254
                 + LYQL +        + + G L  P+       LY +     + H L    + 
Sbjct: 241 QTGAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGAEFMTKHHLRPLSV- 299

Query: 255 NH 256
           NH
Sbjct: 300 NH 301


>gi|156976472|ref|YP_001447378.1| coproporphyrinogen III oxidase [Vibrio harveyi ATCC BAA-1116]
 gi|156528066|gb|ABU73151.1| hypothetical protein VIBHAR_05245 [Vibrio harveyi ATCC BAA-1116]
          Length = 456

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
           T   +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    +   +S 
Sbjct: 56  TTTKNNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-DALMKELKEKAAMPWTQSG 114

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ + P+ + ++   I   + ++++ EIT+E   +      +QG    G
Sbjct: 115 IFHAVYIGGGTPTDLAPEQVRILGQAIHDYFPLAADCEITLEGRINRFSDELYQGALDGG 174

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   +  R   R  +  + +  +  LA+     +  DL+Y LP QT    E
Sbjct: 175 FNRFSFGVQSFNTKVRRSAKRLDDREDVLNRVSELAKEDKIPVIIDLLYGLPYQTKDVLE 234

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHG 247
            +L+  +S     L LYQL +        + + G +  P+       +Y L     + H 
Sbjct: 235 QDLKDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKMSPPATTPEKAGMYELGAKFMAEHH 294

Query: 248 LHAYEISNH 256
           +    + NH
Sbjct: 295 MKQLSV-NH 302


>gi|269966084|ref|ZP_06180174.1| hutW protein [Vibrio alginolyticus 40B]
 gi|269829231|gb|EEZ83475.1| hutW protein [Vibrio alginolyticus 40B]
          Length = 478

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 6/270 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           + +N   +Y+H PFC  +C +C+F  +     +  E F ++ + E++    L   ++   
Sbjct: 80  KATNKRCLYIHVPFCRVRCTFCNFFQNAASRTLVDEYF-EALMQELREKAALPWTQNGIF 138

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ ++++ EIT+E   +      +QG  + G N
Sbjct: 139 HAVYIGGGTPTDLSPVQVRVLGQAIRDHFPLAADCEITLEGRINRFSDELYQGALEGGFN 198

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS   Q  R   R  +  + +  +  +A+     +  DL+Y LP QT    E +
Sbjct: 199 RFSFGVQSFNTQVRRSAKRLDDREDVLKRVSEIAKEDKIPVIIDLLYGLPYQTKEVLEQD 258

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLH 249
           L   LS     L LYQL +        + + G +  PS       +Y L  +  + H + 
Sbjct: 259 LNDFLSTGAHGLDLYQLVVGGSAPMLNLVEKGKIPPPSTTPEKAGMYELGVNFMAKHHMK 318

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGI 278
              +++ +    E SL+N     Y + + I
Sbjct: 319 QLSVNHWAIDNRERSLYNSLAKTYAEVLPI 348


>gi|49183855|ref|YP_027107.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Sterne]
 gi|52144446|ref|YP_082382.1| coproporphyrinogen III oxidase [Bacillus cereus E33L]
 gi|49177782|gb|AAT53158.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus anthracis str. Sterne]
 gi|51977915|gb|AAU19465.1| coproporphyrinogen oxidase, anaerobic [Bacillus cereus E33L]
          Length = 498

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 174 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 231 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 291 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 351 TLDETEKLMPESLTVHTLSFKRAS 374


>gi|88703566|ref|ZP_01101282.1| Oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
 gi|88702280|gb|EAQ99383.1| Oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
          Length = 476

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 4/193 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           + L +YVH PFC   C YC  N  V R +     ++     E++   Q+ G  R ++ + 
Sbjct: 65  DPLSLYVHLPFCHDICYYCGCNKVVTRKEGVAARYLAQLSKELEMQSQIVGKDRPVTQMH 124

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +GGGTP+ +    I  ++  +A  + +      E +IE +P +V        +  G NRI
Sbjct: 125 WGGGTPTYLNDGEITELMHSLASRFRLLDKGYREYSIEIDPRTVSSATIALLKGVGFNRI 184

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ  +E+  + + R    ++    +   R + F  +SFDLIY LP Q        L+
Sbjct: 185 SLGVQDFDERVQKAVNRIQPYTQVAELVEATRAHGFRSLSFDLIYGLPYQDHVSMAETLR 244

Query: 193 RALSYAVDHLSLY 205
           + +S   D ++ Y
Sbjct: 245 KVISLRPDRIACY 257


>gi|328470248|gb|EGF41159.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus 10329]
          Length = 456

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 6/268 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    K+  E F  + + +++    L   +S    +
Sbjct: 60  NNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-AALMQDLKEKAALPWTQSGIFHA 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR 
Sbjct: 119 VYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRF 178

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L 
Sbjct: 179 SFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLN 238

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
             +S     L LYQL +        + + G +  P+       +Y L  +  + H +   
Sbjct: 239 DFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQL 298

Query: 252 EISNHSFLGAE-SLHNLNYWRYGDYIGI 278
            +++ +    E SL+N     Y + + I
Sbjct: 299 SVNHWAVDNRERSLYNSLAKTYAEVLPI 326


>gi|310778054|ref|YP_003966387.1| Coproporphyrinogen dehydrogenase [Ilyobacter polytropus DSM 2926]
 gi|309747377|gb|ADO82039.1| Coproporphyrinogen dehydrogenase [Ilyobacter polytropus DSM 2926]
          Length = 464

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 147/319 (46%), Gaps = 36/319 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPR------S 70
           + +Y+  PFC  KC YC F S+     VG+    F+ + + E++    LTG         
Sbjct: 144 INMYIGIPFCPTKCRYCSFASYEINSGVGRHYNAFVDTLIEEIK----LTGEHLKENGYK 199

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAG 129
           + S++ GGGTPS++   +I  +L  +  N  +SS  E T EA    ++     +  +  G
Sbjct: 200 LGSVYIGGGTPSILTETDIERVLASVKNNVDLSSVKEFTFEAGRVDTLTKKKLEIMKNYG 259

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V+RISL  Q+  E++L+ L R  +  +      L++N+   ++ DLI  LP +   +   
Sbjct: 260 VDRISLNPQTFNEETLKNLNRTFSRDKFDEMYSLSKNMGFIINMDLIIGLPGEGTKEILN 319

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++    Y +++L+++ L ++K ++ +   K+G      +  AV+  N  + +T    L 
Sbjct: 320 TMKELEKYQMENLTVHVLALKKASVLF---KEGHQEEKIDRQAVE--NGIEELTKKKSLK 374

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAIS 296
            Y            E   ++  G ES+ N+         IG+G GA ++       V   
Sbjct: 375 PYYMYRLKNSTQWGENLGYAIEGKESIFNIEMIEENQSTIGLGGGAITKKISAESPVRDH 434

Query: 297 IE-----KHPESWLKMVRK 310
           I+     K P ++++ +R+
Sbjct: 435 IDRLVGPKEPATYVREMRE 453


>gi|257439399|ref|ZP_05615154.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Faecalibacterium prausnitzii A2-165]
 gi|257198274|gb|EEU96558.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Faecalibacterium prausnitzii A2-165]
          Length = 489

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 106/206 (51%), Gaps = 5/206 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E++ +R+       
Sbjct: 155 GSAPKTYSLYLGIPFCPSRCSYCSFVSCNLDRDRKLVQPYVDCLCREVEAIREQADKAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
            + SI+ GGGTP+ +    +  ++  + +N+ +S  VE T+EA  P   +       ++ 
Sbjct: 215 KLCSIYIGGGTPTSLSADQLRQLMGTVRENFDLSKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  ++ L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDEVLAGIGRRHSAQDILDCYADARRAGHEDINMDLIAGLPGDTVAGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
           E  L++A++   ++++++ LT+++ +
Sbjct: 335 EHSLRQAIALNPENITVHTLTLKRAS 360


>gi|311032494|ref|ZP_07710584.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13]
          Length = 495

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 110/203 (54%), Gaps = 10/203 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ----WMRQLTGPRSISS 73
           + +Y+  PFC  KC YC F ++    K G+ ++F+     E+     W+++  G + I++
Sbjct: 168 VSIYIGIPFCPTKCAYCTFPAYAINGKQGKVDSFLGGLHHEIDAIGAWLKE-KGIK-ITT 225

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGVN 131
           +++GGGTP+ I  + + ++ + +  ++     V E+T+EA  P ++        +K  ++
Sbjct: 226 VYYGGGTPTSITAEEMDMLYEQMYASFPDMEKVREVTVEAGRPDTITPEKLDVLKKWNID 285

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++   
Sbjct: 286 RISINPQSYTQETLKAIGRHHTVEETIDKFHLAREMGMNNINMDLIIGLPGEGVGEFAHT 345

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
           L+       + L+++ L+ ++ +
Sbjct: 346 LEETEKLMPESLTVHTLSFKRAS 368


>gi|121606662|ref|YP_983991.1| coproporphyrinogen III oxidase [Polaromonas naphthalenivorans CJ2]
 gi|120595631|gb|ABM39070.1| oxygen-independent coproporphyrinogen III oxidase [Polaromonas
           naphthalenivorans CJ2]
          Length = 468

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           L +YVH PFC   C YC  N  + R+    E +++    E+  +   L   +++S +  G
Sbjct: 63  LSLYVHIPFCESLCYYCACNKIITRHHERGETYLRYLSREVDLYTAHLGVGQTVSQLHLG 122

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+ +    +  ++  + ++++++ + E +IE +P +V+          G NR+S GV
Sbjct: 123 GGSPTFLSDGELHELMAMLRRSFSLAPDGEYSIEVDPRTVDSARLAALAGLGFNRLSFGV 182

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    + + R   A +  + +  AR + F  ++ DLIY LP+QT   ++  L + L 
Sbjct: 183 QDFDPAVQKAVHRVQPAEQVFSLMAAARLMGFESINIDLIYGLPQQTPESFDRTLAQVLQ 242

Query: 197 YAVDHLSLY 205
              D ++LY
Sbjct: 243 LRPDRIALY 251


>gi|84502447|ref|ZP_01000583.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
 gi|84389259|gb|EAQ02056.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
          Length = 451

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 99/192 (51%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +  + VYVH PFC + C +C  ++   +     E +++   TE+  +R    P   +  +
Sbjct: 48  AEPVSVYVHIPFCERLCFFCACHTQGTKTLGPVERYVEVLETEIDLLRVALPPGLRMGRM 107

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+++ P  I  +   I + +T +++ E ++E +P+ ++    +  R AG+ R S
Sbjct: 108 HWGGGTPTILPPALIERLNRAIHRLFTPTASFEFSVEIDPTLIDRAKIEALRAAGLTRAS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+Q  + +  + + R  +       +   R      ++ DL+Y LP QTM + E  + +
Sbjct: 168 IGIQDFDPEVQQAISRLQSFEATRRCVGQLRAAGVTSLNTDLVYGLPHQTMARLEDTIDK 227

Query: 194 ALSYAVDHLSLY 205
            LS++ D ++L+
Sbjct: 228 TLSFSPDRVALF 239


>gi|255534788|ref|YP_003095159.1| coproporphyrinogen III oxidase [Flavobacteriaceae bacterium
           3519-10]
 gi|255340984|gb|ACU07097.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Flavobacteriaceae bacterium 3519-10]
          Length = 459

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 8/198 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-------MQWMRQLTGP 68
           +  + +Y+H PFC + C +C  +  + +    +  +++S L E       +Q    + G 
Sbjct: 49  AEGISIYIHLPFCEQLCTFCACHKRITKQHSVEIPYLESVLKEWDLYLDLLQGEGSIGGK 108

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             I  +  GGGTP+   P N+  +L+GI     ++ N E + E +P++    + Q     
Sbjct: 109 PKIKELHLGGGTPTFFSPANLKTLLEGIFSKADIAENPEFSFEGHPNNTTREHLQTLYDL 168

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R S GVQ  + Q  + + R           + AR I +  +S DL++ LP  T  + 
Sbjct: 169 GFRRASFGVQDYDPQVQKAINRIQPFENVERVTNWAREIGYKGISHDLVFGLPFHTWEKM 228

Query: 188 EMELQRALSYAVDHLSLY 205
           E  +++ L    D L+ Y
Sbjct: 229 EFTIRKTLELKPDRLAFY 246


>gi|254673678|emb|CBA09274.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha275]
          Length = 216

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +   
Sbjct: 25  HISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFAKPA 81

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE++ 
Sbjct: 82  MQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKT 141

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRLRCT 379
           +++E    EF+M  LRL +G+     +   G  +  I  +    RQ  +     +  R T
Sbjct: 142 VAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPT 201

Query: 380 QRGMTMLDSVI 390
           ++G   L+ ++
Sbjct: 202 EKGRLFLNDLL 212


>gi|315453265|ref|YP_004073535.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           felis ATCC 49179]
 gi|315132317|emb|CBY82945.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           felis ATCC 49179]
          Length = 455

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           L +Y H PFC   C +C  N      +  +E++I     E++ + R L   R +  + FG
Sbjct: 50  LSLYFHLPFCKSPCYFCACNVIYSSSERKKEHYILYLQKELELLKRYLDTGREVVQLHFG 109

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+    + +  I+  I   ++  + + E+  E +P     +  +  ++ G NR+S G
Sbjct: 110 GGTPTFFSAEQLERIIKNIEATFSNFAPDAELACEVDPRHFNRDQMRVLKEHGFNRLSFG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  E +  + + R  N       + LAR      ++FDLIY LP Q++  +E  L++ L
Sbjct: 170 VQDFELEVQQAINRLQNFDLVREKVELAREFGINSLNFDLIYGLPFQSVASFEATLKQVL 229

Query: 196 SYAVDHLSLY 205
               D L+++
Sbjct: 230 QLNPDRLAIF 239


>gi|228938136|ref|ZP_04100755.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971011|ref|ZP_04131648.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977615|ref|ZP_04138005.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis Bt407]
 gi|228782085|gb|EEM30273.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis Bt407]
 gi|228788820|gb|EEM36762.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821535|gb|EEM67541.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326938638|gb|AEA14534.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 495

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|121608145|ref|YP_995952.1| coproporphyrinogen III oxidase [Verminephrobacter eiseniae EF01-2]
 gi|121552785|gb|ABM56934.1| oxygen-independent coproporphyrinogen III oxidase
           [Verminephrobacter eiseniae EF01-2]
          Length = 460

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
           +  L +YVH PFC   C YC  N  + R+      +++    E+       G  + +S +
Sbjct: 52  AQPLSLYVHIPFCESLCYYCACNKIITRHPERATVYLRYLAREIALQTTHCGVGQVVSQL 111

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ +    +  ++  + +++ ++   E +IE +P +V+ +      + G NR+S
Sbjct: 112 HLGGGTPTFLADAGLRELMAMLQRSFALAPGGEYSIEVDPRTVDADRLACLAELGFNRLS 171

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +    + + R   A +  A +  AR   F  ++ DLIY LP+QT   +E  L +
Sbjct: 172 LGVQDFDAGVQKAVHRAQPAEQVFALLQAARAQGFDSVNIDLIYGLPRQTPESFERTLAQ 231

Query: 194 ALSYAVDHLSLY 205
            +    + ++LY
Sbjct: 232 TVQLRPERIALY 243


>gi|77458040|ref|YP_347545.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf0-1]
 gi|77382043|gb|ABA73556.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens Pf0-1]
          Length = 460

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L +YVH PFC   C YC  N  + + +     ++Q    E+Q +   L   + +  + FG
Sbjct: 54  LSLYVHVPFCANICYYCACNKVITKDRGRALPYLQRLEQEIQLIACHLDPAQKVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + K++ +    + +  IE +P   + +     R+ G NR+S+
Sbjct: 114 GGTPTFLSHDELRQLMAHLRKHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSI 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q L+    R + R  +  E  A I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GLQDLDPAVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPKQTPDNFARTVEEV 233

Query: 195 LSYAVDHLSLY 205
           +S   D LS++
Sbjct: 234 ISLQPDRLSVF 244


>gi|229591974|ref|YP_002874093.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25]
 gi|229363840|emb|CAY51294.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens SBW25]
          Length = 460

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           + +  L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  + 
Sbjct: 49  KAARPLSLYVHVPFCANICYYCACNKVITKDRGRALPYLQRLEQEIQLVACHLDPKQPVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  +++ + +++ +    + +  IE +P   +       R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRQVMNCLRQHFNLLDDDSGDYGIEIDPREADWATMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+ +  R + R  +  E  A I  AR + F  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSIGLQDLDPEVQRAVNRLQSLEETRAVIDAARTLQFRSINVDLIYGLPKQTPINFAR 228

Query: 190 ELQRALSYAVDHLSLY 205
            ++  +    D LS++
Sbjct: 229 TVEEVIKLQPDRLSVF 244


>gi|194291144|ref|YP_002007051.1| coproporphyrinogen iii oxidase [Cupriavidus taiwanensis LMG 19424]
 gi|193224979|emb|CAQ70990.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Cupriavidus taiwanensis LMG 19424]
          Length = 485

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 5/207 (2%)

Query: 4   LSAYENNMTGQGSNS---LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           LS Y + +    +++   L +Y+H PFC   C YC  N  + R       ++     EM 
Sbjct: 43  LSLYHDALDACRADAPAPLSLYLHIPFCENICYYCGCNKIITRDHGRSARYVSYLGREMA 102

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +  +L   R +    +GGGTP+ + P  +  ++  +  ++ ++   E +IE +P  V+ 
Sbjct: 103 LVAGRLGARRQVIQSHWGGGTPTFLNPDEMRRVMALLNTHFDLAGEGEHSIEIDPRRVDR 162

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +      + G NR+SLGVQ  + +  + + R     E  A +  AR + F  +S DLIY 
Sbjct: 163 DRMALLAELGFNRVSLGVQDFDAEVQQAIHRIQPFQETRAVVDAARALGFRSVSLDLIYG 222

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP QT  ++   + + L+   D LS+Y
Sbjct: 223 LPHQTAARFGRTIDQVLALRPDRLSVY 249


>gi|269962822|ref|ZP_06177162.1| hutW protein [Vibrio harveyi 1DA3]
 gi|269832376|gb|EEZ86495.1| hutW protein [Vibrio harveyi 1DA3]
          Length = 456

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
           T   +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    +   +S 
Sbjct: 56  TTTKNNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-DALMKELKEKAAMPWTQSG 114

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ + P+ + ++   I   + ++++ EIT+E   +      +QG    G
Sbjct: 115 IFHAVYIGGGTPTDLAPEQVRILGQAIHDYFPLAADCEITLEGRINRFSDELYQGALDGG 174

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   +  R   R  +  + +  +  LA+     +  DL+Y LP QT    E
Sbjct: 175 FNRFSFGVQSFNTKVRRSAKRLDDREDVLNRVSELAKEDKIPVIIDLLYGLPYQTKDVLE 234

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHG 247
            +L+  +S     L LYQL +        + + G +  P+       +Y L     + H 
Sbjct: 235 QDLKDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKMPPPATTPEKAGMYELGAKFMAEHH 294

Query: 248 LHAYEISNH 256
           +    + NH
Sbjct: 295 MKQLSV-NH 302


>gi|217958474|ref|YP_002337022.1| coproporphyrinogen III oxidase [Bacillus cereus AH187]
 gi|217065628|gb|ACJ79878.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH187]
          Length = 495

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|228919711|ref|ZP_04083073.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|229068542|ref|ZP_04201843.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus F65185]
 gi|229078193|ref|ZP_04210767.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock4-2]
 gi|229149209|ref|ZP_04277449.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1550]
 gi|229177407|ref|ZP_04304789.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 172560W]
 gi|229189077|ref|ZP_04316104.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 10876]
 gi|228594380|gb|EEK52172.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 10876]
 gi|228606039|gb|EEK63478.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 172560W]
 gi|228634239|gb|EEK90828.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1550]
 gi|228705115|gb|EEL57527.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock4-2]
 gi|228714684|gb|EEL66558.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus F65185]
 gi|228840065|gb|EEM85344.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 496

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|218895922|ref|YP_002444333.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus G9842]
 gi|228906618|ref|ZP_04070493.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 200]
 gi|228963965|ref|ZP_04125096.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218544190|gb|ACK96584.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus G9842]
 gi|228795695|gb|EEM43171.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228853001|gb|EEM97780.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 200]
          Length = 495

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|255101912|ref|ZP_05330889.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-63q42]
 gi|255307781|ref|ZP_05351952.1| coproporphyrinogen III oxidase [Clostridium difficile ATCC 43255]
          Length = 518

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 131/271 (48%), Gaps = 20/271 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 189 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEV 248

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 249 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIKEFTVEAGRPDTITEQKLRVLKKHNV 308

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++AR + F  ++ D+I  L  + +   + 
Sbjct: 309 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEDLNMVKN 368

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLF------YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            L+     + + L+++ L I++ +        YK H      L      V + +L+    
Sbjct: 369 TLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEH------LTQYEEMVKMIDLSMKYA 422

Query: 244 SAHGLHAYEISNHS-FLGAESLHNLNYWRYG 273
              GL+ Y +      LG  +L N+ Y + G
Sbjct: 423 KDMGLNPYYMYRQKHMLG--NLENIGYAKEG 451


>gi|228957288|ref|ZP_04119050.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802374|gb|EEM49229.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 496

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|228951365|ref|ZP_04113474.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228808302|gb|EEM54812.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 496

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|206975725|ref|ZP_03236637.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus H3081.97]
 gi|206746187|gb|EDZ57582.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus H3081.97]
          Length = 495

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|254431726|ref|ZP_05045429.1| oxygen-independent coproporphyrinogen III oxidase [Cyanobium sp.
           PCC 7001]
 gi|197626179|gb|EDY38738.1| oxygen-independent coproporphyrinogen III oxidase [Cyanobium sp.
           PCC 7001]
          Length = 452

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 22/299 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQW 61
           +A    +    +  L +YVH PFC   C YC  N      ++G    E ++ S   E++ 
Sbjct: 40  AALREQLAQPTTAPLSLYVHVPFCRHACWYCGCNRIT--TQLGSRVVEPYLASLARELEL 97

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   +   R ++ + +GGGTP+ + PQ  + +   IA+++ +++++E +IE NP  +  +
Sbjct: 98  ITAAMPQRRRLAQLHWGGGTPNYLNPQETSRLWQLIARHFDLAADLEASIEVNPEFLSRD 157

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NR+S G+Q  + +  + + R     +    +   R   F  ++ DLI  L
Sbjct: 158 GVLQLRQLGFNRLSFGIQDADPEVQKAVNRVVPPEQLRRVMGWLREADFASVNVDLICGL 217

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT  ++   L+   +   D +SL+        L  +  +     LPS++  + +  L 
Sbjct: 218 PLQTPERFRHTLELVEALHPDRVSLFSFAYLPDQLPLQ-RRIAAADLPSQHARITMLELA 276

Query: 240 QSITSAHGLHAYEISNHSFLGAESL----------HNLNYWRYG---DYIGIGPGAHSR 285
           Q +  A G  A  + +H  L  +SL           N   +  G   + +G+GP A S+
Sbjct: 277 QELLCARGYEAIGM-DHYALAGDSLAAAAREGRLHRNFQGYTTGGELELLGVGPTAISQ 334


>gi|170693608|ref|ZP_02884766.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
 gi|170141390|gb|EDT09560.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
          Length = 461

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 25/292 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            L +Y H PFC   C YC  N    + +     +++    E+          R +S +  
Sbjct: 54  DLSLYFHIPFCDTVCFYCGCNKIATKNRGRARPYLEQLKREIALQAACFDTRRPVSQLHL 113

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ +    +A ++    +++T+   S  E +IE +P     +     RK G NR+S
Sbjct: 114 GGGTPTFMSNDELAELMSAAREHFTLLPDSEAEYSIEVDPREASPDTIAHLRKLGFNRLS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +    + + R        + +  AR++ F  +  DLIY LP QT++ +   L  
Sbjct: 174 LGVQDFDPLVQQAINRIQPLDMTASVMQAARHVGFHSIGVDLIYGLPHQTVSSFSRTLDT 233

Query: 194 ALSYAVDHLSLYQLT-IEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAH--- 246
            +  A D LS++    + K    +KM +  D   L  P+  +A+ L  + + +T+A    
Sbjct: 234 MIELAPDRLSVFAYAHMPK---LFKMQRQMDAAALPSPAARLAI-LQRVVERLTAAGYVY 289

Query: 247 -GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGS 290
            G+  + +       A++   L  N+  Y      D IG   GA S  KVG 
Sbjct: 290 IGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSIGKVGD 339


>gi|262377338|ref|ZP_06070562.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           lwoffii SH145]
 gi|262307791|gb|EEY88930.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           lwoffii SH145]
          Length = 457

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 8/239 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           S  + +Y+H PFC   C +C  +  V +    ++ +IQ+ L E     +L   + I   I
Sbjct: 52  SEGISLYIHLPFCESLCTFCGCHKRVTKRHEVEQPYIQALLKEWGLYCELLQEKPIIKEI 111

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+     ++A ++ GI     V+   E + E +P++    + QG    G  R+S
Sbjct: 112 HFGGGTPTFFSMAHLAQLIQGILAKADVAPEYEFSFEGHPNNTTREHLQGLYDLGFRRVS 171

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   E   + + R             AR I +  +S DL++ LP Q++      +++
Sbjct: 172 YGVQDYNETVQKAIHRIQPYENVKQVTEWAREIGYESISHDLVFGLPFQSLDDVLNTIEQ 231

Query: 194 ALSYAVDHLSLY---QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             S   D L+LY    +   KG    +  KD D  +P + +  + Y   +    AHG H
Sbjct: 232 TNSLLPDRLALYSYAHVPWIKGN-GQRGFKDAD--VPKDAIKRECYEAGKKKLLAHGYH 287


>gi|206967991|ref|ZP_03228947.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH1134]
 gi|218234955|ref|YP_002365659.1| coproporphyrinogen III oxidase [Bacillus cereus B4264]
 gi|206736911|gb|EDZ54058.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH1134]
 gi|218162912|gb|ACK62904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus B4264]
          Length = 495

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|75759702|ref|ZP_00739784.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228899546|ref|ZP_04063802.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 4222]
 gi|74492811|gb|EAO55945.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228860136|gb|EEN04540.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 4222]
          Length = 495

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|148973948|ref|ZP_01811481.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
 gi|145965645|gb|EDK30893.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
          Length = 469

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 4/219 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           G+  +   +Y+H PFC  +C +C+F  +    K+  E F  + + E++   +    +S  
Sbjct: 57  GKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKLVDEYF-DALMVELKQKAKTPWAQSGL 115

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++ GGGTP+ + PQ +  +   I + + ++++VE+T+E   +      F    +AG 
Sbjct: 116 FHAVYIGGGTPTDLSPQQVEQLGKAIRQYFPLANDVEMTLEGRINRFGDEMFDRALEAGF 175

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+Y LP Q+M  ++ 
Sbjct: 176 NRFSFGIQSFNTQVRRSAKRLDDREVVLERISALSRTEQAPIVLDLLYGLPYQSMEVFQQ 235

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +L+  +S     + LYQL +        + + G +  P+
Sbjct: 236 DLEDYMSTGAHGIDLYQLIVGGNAPMLNLVEKGKIPPPA 274


>gi|303257980|ref|ZP_07343989.1| HutW protein [Burkholderiales bacterium 1_1_47]
 gi|302859323|gb|EFL82405.1| HutW protein [Burkholderiales bacterium 1_1_47]
          Length = 439

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 21/238 (8%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC  +C +C F  N +         N  I+ F    Q   Q + P  I +++FG
Sbjct: 24  AYVHIPFCESRCLFCMFYQNPYASEAADAYTNTLIKEFELWNQRATQNSAP--IKALYFG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +EP NI  ILD +  N  ++ + EIT E     +         + GVNR+S+GV
Sbjct: 82  GGTPTALEPHNIKKILDAVRTNLPLAEDCEITFEGRLHGLTDEKLSACVEGGVNRLSIGV 141

Query: 138 QSLEEQSLRFLGRNHNAS------EAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           Q+      + + R ++        E I+AI +LA  I      DL++  P Q    W  +
Sbjct: 142 QTFNADIRKEMQRLNSPEYIIRRLEKISAIDNLAVVI------DLLFGFPGQKGKVWTDD 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV--AVDLYNLTQSITSAH 246
           L+ A    +D +  YQL + + +      K G L  P+  +  A D+Y  +    S+H
Sbjct: 196 LKIASELPIDGVDCYQLNVFEKSPLNTRIKSG-LFDPAATLAEAADMYAESVEHFSSH 252


>gi|187925096|ref|YP_001896738.1| coproporphyrinogen III oxidase [Burkholderia phytofirmans PsJN]
 gi|187716290|gb|ACD17514.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phytofirmans PsJN]
          Length = 461

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 126/305 (41%), Gaps = 23/305 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A  +   G  +  L +Y H PFC   C YC  N    R +     ++     EM   
Sbjct: 41  YLRAAAD--PGASATDLSLYFHIPFCDTVCFYCGCNKVATRNRAHARPYLDRLKREMALQ 98

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEV 119
                  R +S + +GGGTP+ +     A ++    +++ +   +  E +IE +P     
Sbjct: 99  AACFDTRRPVSQLHWGGGTPTFLSHDETAELMAATREHFKLLPDAEAEYSIEVDPREASP 158

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +     RK G NR+SLGVQ  +    + + R        + +  AR   F  +  DLIY 
Sbjct: 159 DTIAHLRKLGFNRLSLGVQDFDPIVQQAINRIQPLEMTASVMQAARETGFHSIGVDLIYG 218

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVD-LY 236
           LP QT+  +   L   L+ A D LS++          +KM +  D   LPS  V +  L 
Sbjct: 219 LPHQTVESFSRTLDTMLALAPDRLSVF--AYAHMPQLFKMQRQMDPATLPSPEVRLAILQ 276

Query: 237 NLTQSITSAH----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSR 285
            + + +T A     G+  + +       A++   L  N+  Y      D IG   GA S 
Sbjct: 277 RVVERLTGAGYVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSI 334

Query: 286 VKVGS 290
            KVG 
Sbjct: 335 GKVGD 339


>gi|13475538|ref|NP_107102.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14026290|dbj|BAB52888.1| anaerbic coproporphyrinogen III oxidase [Mesorhizobium loti
           MAFF303099]
          Length = 449

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 102/195 (52%), Gaps = 4/195 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSIS 72
           +G + + +Y+H P+C K C +C  ++   R+      F+ S   E++ +  L  G   + 
Sbjct: 42  KGDDEISLYLHIPYCDKLCWFCACHTKQTRHYQPVATFLHSLHREIEAVGSLVRGKGRVR 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I FGGG+P++++P++I  + + +   + V  +  +++E +PS ++          G+ R
Sbjct: 102 AIHFGGGSPTMLKPEDILSLGEALRDRFDVLDDASLSVEIDPSDMDEARLDALSAIGMTR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHN--ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            SLGVQ  + +  + + R  +   ++++     AR +   ++ DL+Y LP QT+      
Sbjct: 162 ASLGVQDFDPKVQKAINREQSFLLTKSVVDAVRARGV-NSVNLDLLYGLPHQTLESVART 220

Query: 191 LQRALSYAVDHLSLY 205
           + +AL+   D L+L+
Sbjct: 221 VAQALTLRPDRLALF 235


>gi|229137689|ref|ZP_04266294.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST26]
 gi|228645804|gb|EEL02033.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST26]
          Length = 496

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|186475369|ref|YP_001856839.1| coproporphyrinogen III oxidase [Burkholderia phymatum STM815]
 gi|184191828|gb|ACC69793.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phymatum STM815]
          Length = 470

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 23/296 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G     L +Y H PFC   C YC  N  V R +     ++Q    E+    +     R +
Sbjct: 58  GASETDLSLYFHIPFCDTVCFYCGCNKVVTRNRSRSAPYLQRLKREIALQAECFDTARPV 117

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +    +  ++    +++ + S+   E +IE +P           R  G
Sbjct: 118 SQLHWGGGTPTFLSHDEMTELMATTREHFLLRSDAEGEFSIEVDPREAPPKTIVHLRNLG 177

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   F  +  DLIY LP QT++ + 
Sbjct: 178 FNRLSLGVQDFDPVVQRAINRIQPLEMTAGVMRAARATGFHSIGVDLIYGLPYQTVSSFS 237

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSA 245
             L   L  A D LS++          +KM +  D   L  P+E +A+ L  + + +T A
Sbjct: 238 KTLDTMLELAPDRLSVFGYA--HMPQLFKMQRQMDASTLPSPAERLAI-LQLVVERLTDA 294

Query: 246 H----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGS 290
                G+  + +       A++   L  N+  Y      D IG   GA S  KVG 
Sbjct: 295 GYVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSIGKVGD 348


>gi|42780040|ref|NP_977287.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 10987]
 gi|222094624|ref|YP_002528684.1| coproporphyrinogen iii oxidase [Bacillus cereus Q1]
 gi|229199879|ref|ZP_04326468.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1293]
 gi|42735958|gb|AAS39895.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus ATCC 10987]
 gi|221238682|gb|ACM11392.1| coproporphyrinogen oxidase, anaerobic [Bacillus cereus Q1]
 gi|228583598|gb|EEK41827.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1293]
          Length = 496

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|30019044|ref|NP_830675.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 14579]
 gi|29894586|gb|AAP07876.1| Coproporphyrinogen oxidase, anaerobic [Bacillus cereus ATCC 14579]
          Length = 498

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 174 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 231 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 291 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 351 TLDETEKLMPESLTVHTLSFKRAS 374


>gi|254976336|ref|ZP_05272808.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-66c26]
 gi|255093721|ref|ZP_05323199.1| coproporphyrinogen III oxidase [Clostridium difficile CIP 107932]
 gi|255315473|ref|ZP_05357056.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-76w55]
 gi|255518136|ref|ZP_05385812.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-97b34]
 gi|255651252|ref|ZP_05398154.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-37x79]
 gi|260684316|ref|YP_003215601.1| coproporphyrinogen III oxidase [Clostridium difficile CD196]
 gi|260687975|ref|YP_003219109.1| coproporphyrinogen III oxidase [Clostridium difficile R20291]
 gi|260210479|emb|CBA64953.1| putative coproporphyrinogen III oxidase [Clostridium difficile
           CD196]
 gi|260213992|emb|CBE06105.1| putative coproporphyrinogen III oxidase [Clostridium difficile
           R20291]
          Length = 518

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 131/271 (48%), Gaps = 20/271 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 189 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEV 248

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 249 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIKEFTVEAGRPDTITEQKLRVLKKHNV 308

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++AR + F  ++ D+I  L  + +   + 
Sbjct: 309 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEELNMVKN 368

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLF------YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            L+     + + L+++ L I++ +        YK H      L      V + +L+    
Sbjct: 369 TLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEH------LTQYEEMVKMIDLSMKYA 422

Query: 244 SAHGLHAYEISNHS-FLGAESLHNLNYWRYG 273
              GL+ Y +      LG  +L N+ Y + G
Sbjct: 423 KDMGLNPYYMYRQKHMLG--NLENIGYAKEG 451


>gi|254481233|ref|ZP_05094478.1| oxygen-independent coproporphyrinogen III oxidase [marine gamma
           proteobacterium HTCC2148]
 gi|214038396|gb|EEB79058.1| oxygen-independent coproporphyrinogen III oxidase [marine gamma
           proteobacterium HTCC2148]
          Length = 478

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 4/209 (1%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           M+    ++N+        L +Y+H PFC   C YC  N  V R K   + +++S   E+ 
Sbjct: 50  MQQYRDWQNSDGDHQRAPLSLYLHVPFCSDICYYCACNKIVTRKKNAAQQYLKSLQHEII 109

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSV 117
              +L G  R I+ + +GGGTP+ ++   I  ++  +A ++ +      E +IE +P +V
Sbjct: 110 LQSELVGDQRPITQMHWGGGTPTYLDHAQITELMHLLASHFRLLDKGYREYSIEIDPRTV 169

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLI 176
           E +     +  G NRISLG+Q  +    + + R  +  +  + +   R + F  +SFDLI
Sbjct: 170 ENSTIALLKGVGFNRISLGIQDFDPLVQKAVNRVQSYPQIASLVDCIRAHNFRSLSFDLI 229

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLY 205
           Y LP Q        L + +S   D ++ Y
Sbjct: 230 YGLPHQDRHTMTETLGKVISLRPDRIACY 258


>gi|195953251|ref|YP_002121541.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195932863|gb|ACG57563.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 457

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 115/246 (46%), Gaps = 11/246 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y+H PFC   C +C  N  +       + ++     E+  ++  L   + I     G
Sbjct: 53  LSLYIHIPFCENACWFCGCNVIISHRTDVAKPYLNYLFKEVDMLKDVLKDYKKIDQFHIG 112

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++ ++   ++  I   +  +   E++IE +P  ++    + Y++ G NRIS+G+
Sbjct: 113 GGTPNFLDNEDFYNMMSFIKDRFDFTEEPEVSIEIDPRHIDYKKLKLYKELGFNRISMGI 172

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R  +       I+  R++ +  ++ DL+Y LP QT+  ++  +++ + 
Sbjct: 173 QDFDRNVQERINRVQDEELLKNVIYDIRSLGYKSLNIDLMYGLPGQTVDTFKSTIEKTIE 232

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++ D ++++           +   D    LP  ++ +D+  L         +  +E S++
Sbjct: 233 FSPDRVAVFNFAYVPWLKPLQRKIDA-TTLPEASIKLDMLKL--------AIELFEASDY 283

Query: 257 SFLGAE 262
           +F+G +
Sbjct: 284 AFIGMD 289


>gi|237740604|ref|ZP_04571085.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422621|gb|EEO37668.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 411

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 12/276 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISS 73
           S  L +Y H P+C K C +C+ N   ++     E++ +    E++     +      +  
Sbjct: 40  SKQLALYFHTPYCDKICSFCNMNR--KQLDNDLEDYTKYICDEIKKYGAYKFCKTSEVDV 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP++ + + +  IL  + +N+  S + E+T E    ++     +   K GVNRI
Sbjct: 98  VFFGGGTPTIFKKEQLERILKTLRENFIFSKDYEMTFETTLHNLSFEKLEIMEKYGVNRI 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+   +  + L R ++ +  +  +   +  F  +   D+IY    QT  +  +E  
Sbjct: 158 SVGIQTFSNRGRKLLNRTYDKNYVVERLKEIKKRFSGLICIDIIYNYAGQTDEEI-LEDA 216

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           R LS   VD  S Y L I  G+   K   KD  +   S     +L+NL       +    
Sbjct: 217 RLLSEIKVDSTSFYSLMIHDGSDISKEREKDKSIYTYSLKRDEELHNLFYEACIENSYEL 276

Query: 251 YEISNHSFLGAES---LHNLNYWRYGDYIGIGPGAH 283
            E++  S  G +    + N N  +    IG+G G H
Sbjct: 277 LELTKLS-NGKDKYKYIRNNNSLKNLLPIGVGAGGH 311


>gi|229042740|ref|ZP_04190479.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH676]
 gi|229108477|ref|ZP_04238094.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-15]
 gi|229126299|ref|ZP_04255317.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-Cer4]
 gi|229143592|ref|ZP_04272016.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST24]
 gi|296501604|ref|YP_003663304.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
 gi|228639849|gb|EEK96255.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST24]
 gi|228657291|gb|EEL13111.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-Cer4]
 gi|228675104|gb|EEL30331.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-15]
 gi|228726574|gb|EEL77792.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH676]
 gi|296322656|gb|ADH05584.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
          Length = 496

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|254505827|ref|ZP_05117972.1| HutW protein [Vibrio parahaemolyticus 16]
 gi|219551050|gb|EED28030.1| HutW protein [Vibrio parahaemolyticus 16]
          Length = 457

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 10/242 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
           +Y+H PFC  +C +C+F  +    K+  +++ ++ + E+  +  +  T      +++ GG
Sbjct: 64  LYIHIPFCRVRCTFCNFFQNAASRKL-VDDYFEALMVEIDQKAAQPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ +  +   I +++ +S++ EIT+E   +      F+   + G NR S G+Q
Sbjct: 123 GTPTDLSPQQVERLGKAIQRSFPLSTDCEITLEGRINRFSDEMFERALEGGFNRFSFGIQ 182

Query: 139 SLEEQ---SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S   Q   S + L    +  E +A++   +     +  DL+Y LP QT   +E +L   +
Sbjct: 183 SFNTQVRRSAKRLDDREDVMERVASLSATQQA--PIIVDLLYGLPYQTAEVFEQDLIDFM 240

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEIS 254
           +     L LYQL +        +   G +  P+  +    +Y L       H L    + 
Sbjct: 241 ATGAHGLDLYQLVVGGDAPMINLVDKGKIPAPATTIEKASMYELGSQFMDQHHLRRLSV- 299

Query: 255 NH 256
           NH
Sbjct: 300 NH 301


>gi|71906687|ref|YP_284274.1| coproporphyrinogen III oxidase [Dechloromonas aromatica RCB]
 gi|71846308|gb|AAZ45804.1| coproporphyrinogen III oxidase, anaerobic [Dechloromonas aromatica
           RCB]
          Length = 471

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 7/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGP 68
           G  S  L +Y H PFC   C YC  N  + +       +++    E++     +    G 
Sbjct: 57  GGISRPLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLKYLAKELEIQAAALEGRDGE 116

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +  + +GGGTP+ +    +  ++    K++ +    E +IE +P  V+        + 
Sbjct: 117 HEVIQLHWGGGTPTFLSHSEMRQLMGETRKHFKLLDGGEYSIEVDPRKVDTATVALLGEL 176

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           G NR+S+GVQ  +E+    + R  +  E  + I  AR N F  +S DLIY LP QT+  +
Sbjct: 177 GFNRMSVGVQDFDEKVQVAVNRVQSEEETYSVIRDARANGFKSVSVDLIYGLPHQTVMGF 236

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
              L+R L+   D LS+Y       ++F    +  +  LPS +  + +  L  + +T A
Sbjct: 237 NRTLERVLAMDPDRLSIYNYA-HMPSMFKPQRRINEGDLPSADTKLQILALAIKKLTDA 294


>gi|297190539|ref|ZP_06907937.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197717853|gb|EDY61761.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 453

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 8/274 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISS 73
           ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R+  G   P   ++
Sbjct: 51  DALSLYLHVPFCEVRCGFCNLFTRIGAPDELTGRYLDALDRQAVAVREALGDGAPVRFAA 110

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             FGGGTP+ +    +  + D   K      S V +++E +P++   +        G  R
Sbjct: 111 AAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPATATADRLAVLADRGTTR 170

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS  ++  R   R    ++  AA+   R    P ++ DLIY +  QT   W   L
Sbjct: 171 VSIGVQSFIDEEARAAVRPQRRADVEAALGRIREAGIPVLNIDLIYGIDGQTERTWLSSL 230

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL++  + L LY L +   T   ++   GD     +   + LY   +    AHG    
Sbjct: 231 DAALAWEPEELYLYPLYVRPLTGLGRLGAAGDAAWDEQR--LRLYRAGRDHLLAHGYEQV 288

Query: 252 EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
            +      GA S  + ++    D  IG+G GA S
Sbjct: 289 SMRMFRRAGAPSSASDDHACQTDGMIGLGCGARS 322


>gi|282898691|ref|ZP_06306679.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Cylindrospermopsis raciborskii CS-505]
 gi|281196559|gb|EFA71468.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Cylindrospermopsis raciborskii CS-505]
          Length = 460

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 2/191 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           L +Y H PFC   C +C  N+ +   K   E ++ +   E++   R +   R +  I +G
Sbjct: 57  LSLYFHIPFCETPCYFCGCNTVISHNKKIAEPYVNNLAQEIKNTSRLIDTSRPVLQIHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +E + +  + + I + ++V +N E++IE NP  +  +     R  G NRIS G+
Sbjct: 117 GGTPNYLEIRQVEFLWETINRYFSVDANAEVSIEINPRYINRDYINSLRSIGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + Q    + R         A+  + ++ F  ++ DLIY LP Q +  ++  L + ++
Sbjct: 177 QDFDPQVQLAVNRIQPEKMLFDAMDWIKQSNFSSVNVDLIYGLPYQNLQGFQETLTKTIA 236

Query: 197 YAVDHLSLYQL 207
              D + ++  
Sbjct: 237 LDPDRIVVFNF 247


>gi|256821774|ref|YP_003145737.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
 gi|256795313|gb|ACV25969.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
          Length = 458

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T      L +Y+H PFC   C YC  N  + + +   + ++++ + E + +      R +
Sbjct: 46  TSNVGKPLSLYLHIPFCENICYYCACNKVITKDRSKADRYLKALVKEAEMIAPYVKGRKV 105

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + I +GGGTP+ +  + I  ++  + + +     N E +IE +P SV+         AG 
Sbjct: 106 TQIHWGGGTPTFLSNEQIEGLVSKLRELFEFDDDNGEFSIEIDPRSVDHKTMASLAHAGF 165

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ    +  + + R     +    +  A R+ F  ++ DLIY LP QT+  +  
Sbjct: 166 NRLSMGVQDFNPEVQKAVNRIQPEEDTRHLLLQARRHGFNSINIDLIYGLPHQTVESFNE 225

Query: 190 ELQRALSYAVDHLSLY 205
            + + ++ A D LS++
Sbjct: 226 TIDKIITMAPDRLSVF 241


>gi|291277208|ref|YP_003516980.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           mustelae 12198]
 gi|290964402|emb|CBG40252.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           mustelae 12198]
          Length = 457

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +YVH PFC   C +C  N      +  +  ++     E++ +RQ +   R +  + FG
Sbjct: 50  LSLYVHLPFCRSACYFCACNVIYTNSEEKKVRYLTYLRKELELIRQSMDTKREVVQLHFG 109

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+    + +  ++  I + +   SS+ E++ E +P     +     +  G NR+S G
Sbjct: 110 GGTPTYFSAKQLEEVIAMIREVFVNFSSDAEVSCEIDPRHFTEDQMIVLKNGGFNRVSFG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  +E+    + R  +       + +AR      ++FDLIY LP Q++++++  LQ+A+
Sbjct: 170 VQDFDERVQAAVNRFQSMELMQEVVEIARKHGITSINFDLIYGLPHQSLSRFQETLQKAV 229

Query: 196 SYAVDHLSLY 205
           S   D  +++
Sbjct: 230 SLGPDRFAIF 239


>gi|229071822|ref|ZP_04205036.1| Coproporphyrinogen oxidase [Bacillus cereus F65185]
 gi|228711301|gb|EEL63262.1| Coproporphyrinogen oxidase [Bacillus cereus F65185]
          Length = 216

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 8/220 (3%)

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +P QT+   +  L  A +  V H S Y L +E  T+FY +   G L LP E+    +Y +
Sbjct: 1   MPGQTIEDVKETLDIAFTLGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEI 60

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
                  HG + YEISN S    +S HNL YW   +Y G G GAHS V  G     +   
Sbjct: 61  VMDEMEKHGYNQYEISNFSKGDNKSRHNLTYWNNEEYYGFGAGAHSYVN-GERIQNVGPL 119

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K    +   + + G   ++   ++ +++ +E L +GLR  +G+S   +       +D   
Sbjct: 120 KQ---YFNKIDETGFPYLDVHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVF 176

Query: 359 ERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            + L   Q QG +E  +   +R T++G  + + V  +  +
Sbjct: 177 AKQLQSNQEQGLLEE-EDGHVRLTRKGKLLGNEVFQSFLI 215


>gi|146307636|ref|YP_001188101.1| coproporphyrinogen III oxidase [Pseudomonas mendocina ymp]
 gi|145575837|gb|ABP85369.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas mendocina
           ymp]
          Length = 460

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +    L +YVH PFC   C YC  N  + + +     +++    E++ + R +   + I 
Sbjct: 49  KARRPLSLYVHVPFCAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYVDKDQPIE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + +++ +    + + +IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRRLMLHLRQHFNLLDDDSGDYSIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+ +  R + R     E  A +  AR + F  ++ DLIY LPKQT  ++  
Sbjct: 169 NRVSLGVQDLDPEVQRAVNRLQTLEETRAIVEAARTLQFRSVNIDLIYGLPKQTPERFAR 228

Query: 190 ELQRALSYAVDHLSLY 205
            +   ++   D LSL+
Sbjct: 229 TVAEVIALQPDRLSLF 244


>gi|126700356|ref|YP_001089253.1| coproporphyrinogen III oxidase [Clostridium difficile 630]
 gi|115251793|emb|CAJ69628.1| Coproporphyrinogen III oxidase [Clostridium difficile]
          Length = 519

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 131/271 (48%), Gaps = 20/271 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 190 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEV 249

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 250 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIKEFTVEAGRPDTITEQKLRVLKKHNV 309

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++AR + F  ++ D+I  L  + +   + 
Sbjct: 310 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEDLNMVKN 369

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLF------YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            L+     + + L+++ L I++ +        YK H      L      V + +L+    
Sbjct: 370 TLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEH------LTQYEEMVKMIDLSMKYA 423

Query: 244 SAHGLHAYEISNHS-FLGAESLHNLNYWRYG 273
              GL+ Y +      LG  +L N+ Y + G
Sbjct: 424 KDMGLNPYYMYRQKHMLG--NLENIGYVKEG 452


>gi|254253031|ref|ZP_04946349.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
 gi|124895640|gb|EAY69520.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
          Length = 552

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     E+        P R++
Sbjct: 140 GASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREIALQAARFDPARAV 199

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +     A ++    +++T++  ++ E +IE +P +V        R  G
Sbjct: 200 TQLHWGGGTPTFLSDDETAELMAATREHFTLAPDADAEFSIEIDPRTVTPATLVHLRTIG 259

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +      + R          +  AR   F   S DLIY LP QT++ + 
Sbjct: 260 FNRLSLGVQDFDPVVQHAINRIQPLEMTADLLSAARATGFHSTSVDLIYGLPHQTVSVFA 319

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LPS +  + L  L   + +  G
Sbjct: 320 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDAALPSPDTRIALLGLAIDMLTTAG 377


>gi|312948445|gb|ADR29272.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 412

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 3/188 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  +         +N+I++ + + Q M QL      +S   GGGT
Sbjct: 42  LYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIVQAQQM-QLEAV-DWASFTIGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    ++ +  G+     V +++   IE +PS          R+  VNR+S+GVQS 
Sbjct: 100 PLLLNVGQLSRLFRGVFDELQVDAHIFKAIETSPSDTTAEKVALLRQLAVNRVSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R H+A  A  A+ L  R  FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 NDLELATLHRRHSAENAHRALELLHRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQP 219

Query: 200 DHLSLYQL 207
           D L LY L
Sbjct: 220 DELFLYPL 227


>gi|329120419|ref|ZP_08249085.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327462103|gb|EGF08431.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 608

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 23/259 (8%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            Y+H PFC   C +C F  N+          + + + L +   +RQ  G   I +++FGG
Sbjct: 55  AYLHIPFCANHCVFCGFYRNAWKDEQSKTYTDKVIAELAQEAGIRQGGG--KIRAVYFGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +   ++  ++    +   ++ + E T+E   S  + +  Q    AGV RIS+GVQ
Sbjct: 113 GTPTALLTGDLVRLIRACYQYLPLADDCEFTLEGRMSHFDPDKAQAAIDAGVTRISIGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + +    R LGR H+  EA A +     +   +  DLI+ LP Q+   W+ +L  A +  
Sbjct: 173 TFDTAIRRRLGRKHSGEEAAAYLERLGRLNTVLVADLIFGLPGQSGEIWQNDLHIAAALP 232

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY------- 251
           +  L  Y           +M + G    P+     D    TQS+  AH + AY       
Sbjct: 233 LAGLDTYAFNCYPFLPINRMIEKGAFPPPA---GFD----TQSLQYAHAV-AYLAEQGWE 284

Query: 252 EISNHSFL----GAESLHN 266
           +ISN+ F     G  +L+N
Sbjct: 285 QISNNHFAYPGRGERNLYN 303


>gi|313608738|gb|EFR84560.1| coproporphyrinogen dehydrogenase [Listeria monocytogenes FSL
           F2-208]
          Length = 203

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 4/174 (2%)

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   
Sbjct: 2   LKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQ 61

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K+ E     ++K
Sbjct: 62  YEISNFAKDGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKKYMEP----LQK 117

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           N     +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+
Sbjct: 118 NILPTFQQKELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDTTFANAIQK 171


>gi|295401086|ref|ZP_06811060.1| Coproporphyrinogen dehydrogenase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976879|gb|EFG52483.1| Coproporphyrinogen dehydrogenase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 501

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 33/295 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R  +I+
Sbjct: 174 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMREIGRFLKERGINIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + + +     V EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSISAEEMDQLYAVMYEAFPNIERVREITVEAGRPDTITPEKLNVLKKWNI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ D+I  LP + + ++  
Sbjct: 294 GRISINPQSYIQETLKAIGRHHTVDETIEKFHLAREMGMNNINMDVIIGLPGEGIKEFSH 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLF------YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            L +      + L+++ L+ ++ +        YK+   G++         ++    Q  T
Sbjct: 354 TLAQTEKLMPESLTVHTLSFKRASEMTKNKAKYKVADRGEI--------SEMMKAAQDWT 405

Query: 244 SAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
             HG   Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 406 KRHGYVPYYLYRQKNILGNLENVGYALPGKESIYNIMIMEEQQSIIGLGCGASSK 460


>gi|302556862|ref|ZP_07309204.1| coproporphyrinogen III oxidase [Streptomyces griseoflavus Tu4000]
 gi|302474480|gb|EFL37573.1| coproporphyrinogen III oxidase [Streptomyces griseoflavus Tu4000]
          Length = 453

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 8/279 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
            G+  ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R+  G R+ 
Sbjct: 42  AGEAKDALSLYLHIPFCEVRCGFCNLFTRIGAPDGLTGAYLDALDRQATAVREALGERTP 101

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   +        V +++EA+P++   +      +
Sbjct: 102 VRFATAAFGGGTPTFLTAAELERLCDIAERRMGADLRAVPLSVEASPATATADRLGVLAE 161

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+SLGVQS ++   R   R    ++  AA+   R    P ++ DLIY +  QT   
Sbjct: 162 RGTTRLSLGVQSFDDTEARAAVRPQRRADVEAALGRVRAARIPVLNIDLIYGIDGQTEHT 221

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL++  + L LY L I   T   +   D D    ++ +   LY   +    AH
Sbjct: 222 WLRSLDAALAWRPEELYLYPLYIRPLTGLGRRAVDPDPAWDAQRLR--LYRAGRDHLLAH 279

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
           G     +       A      +Y    D  IG+G GA S
Sbjct: 280 GYEQRSMRMFRRADAPPQGADDYACQTDGMIGLGCGARS 318


>gi|149369968|ref|ZP_01889819.1| coproporphyrinogen III oxidase [unidentified eubacterium SCB49]
 gi|149356459|gb|EDM45015.1| coproporphyrinogen III oxidase [unidentified eubacterium SCB49]
          Length = 454

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 149/345 (43%), Gaps = 41/345 (11%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ YE++   + + ++ +Y+H PFC + C +C  N  + +    +  ++++ L E     
Sbjct: 40  INTYESD---KENTAISLYIHLPFCEQLCTFCGCNKRITKNHTVETPYLETVLKEWTLYT 96

Query: 64  QLTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            L   R I   +  GGGTP+   P+N+A +++GI K  T +    I+ E +P++    + 
Sbjct: 97  NLLNKRPIIRELHIGGGTPTFFSPENLAALINGIFKLATKADKASISFEGHPNNTSFEHL 156

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  +  G NR+S GVQ   E   + + R             AR++ +  +  D+I+ LP 
Sbjct: 157 KVLKDLGFNRVSYGVQDYNETVQKAINRIQPFENVKRVTEQARDLGYNSVGHDIIFGLPF 216

Query: 182 QTMTQW--------EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           QT            E++  R   Y+  H+   +   ++G       KD D  LPS +   
Sbjct: 217 QTKEHIINTIEKTKELKPDRIAFYSYAHVPWIKGNGQRG------FKDTD--LPSPDEKR 268

Query: 234 DLYNLTQSITSAHGLHAYEIS-NHSFLGAESLH--------NLNYWRYGDY-----IGIG 279
           ++Y + +      G    EI  +H  L  +SL+        + N+  Y D      IG+G
Sbjct: 269 EMYEIGKEALQKAGY--IEIGMDHFALSTDSLYQSMKDNTMHRNFMGYSDLKTEIMIGLG 326

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
             + S    G  +     EK  E + K +  N  AV     L+ E
Sbjct: 327 VSSISDSWFGFAQN----EKKVEEYQKRINNNELAVYRGHILNKE 367


>gi|320007246|gb|ADW02096.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 475

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 117/278 (42%), Gaps = 10/278 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISS 73
           ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R   G   P   +S
Sbjct: 47  DALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDDAPVRFTS 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             FGGGTP+ +    +  + D   K      S V +++E +PS+   +        G  R
Sbjct: 107 AAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPSTATADRLAVLADRGTTR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS  +   R   R  + SE  AA+   R    P ++ DLIY +  QT   W   L
Sbjct: 167 VSIGVQSFVDAEARAAVRPQHRSEVEAALGRIREAGIPVLNIDLIYGIEGQTEDTWRTSL 226

Query: 192 QRALSYAVDHLSLYQLTIEK----GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             AL+++ + L LY L +      G L     + G      ++  + LY   +    AHG
Sbjct: 227 DAALAWSPEELYLYPLYVRPLTGLGRLGAAAQEAGGPDAAWDDQRLRLYRAGRDHLLAHG 286

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
                +       A      +Y    D  IG+G GA S
Sbjct: 287 YEQVSMRMFRRADAPPAGPDDYACQTDGMIGLGCGARS 324


>gi|222035586|emb|CAP78331.1| coproporphyrinogen III oxidase and related Fes oxidoreductase
           [Escherichia coli LF82]
          Length = 416

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 3/188 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  +         +N+I++ + + Q M QL      +S   GGGT
Sbjct: 46  LYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIVQAQQM-QLEA-VDWASFTIGGGT 103

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    ++ +  G+     V +++   IE +PS          R+  VNR+S+GVQS 
Sbjct: 104 PLLLNVGQLSRLFRGVFDELQVDAHIFKAIETSPSDTTAEKVALLRQLAVNRVSIGVQSF 163

Query: 141 EEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R H+A  A  A+ L  R  FP ++ D+IY +P QT       L +AL Y  
Sbjct: 164 NDLELATLHRRHSAENAHRALELLHRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQP 223

Query: 200 DHLSLYQL 207
           D L LY L
Sbjct: 224 DELFLYPL 231


>gi|115379345|ref|ZP_01466453.1| elongator protein 3/MiaB/NifB [Stigmatella aurantiaca DW4/3-1]
 gi|115363659|gb|EAU62786.1| elongator protein 3/MiaB/NifB [Stigmatella aurantiaca DW4/3-1]
          Length = 381

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C+  +     +   E ++ +   E + +++  GP + +    GGGTP+L++   + 
Sbjct: 2   RCGFCNLFTAAGPRQDVVEGYLAALGRETRRVKEAIGPATFARAALGGGTPTLLDVAGLH 61

Query: 91  LILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
            + D +A+    +   N+ +++E +P +  +   Q  R  G +R+S+GVQS  E  +  +
Sbjct: 62  TVFD-LAEGVMGADLRNIPVSVEVSPETASLEKLQALRSRGTDRVSIGVQSFIEAEVAAV 120

Query: 149 GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            R    ++   A+   R + FP ++ DLIY +  QT+  W   L+ AL Y+ + + LY L
Sbjct: 121 KRPQKTAQVEEALERIRTLDFPTLNIDLIYGMEGQTVESWLFSLRAALRYSPEEIYLYPL 180

Query: 208 TIEKGTLFYKMHKDGD 223
            +   T   K  +  D
Sbjct: 181 YVRPLTFLGKKGRAWD 196


>gi|223039321|ref|ZP_03609610.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           rectus RM3267]
 gi|222879382|gb|EEF14474.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           rectus RM3267]
          Length = 407

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 102/194 (52%), Gaps = 9/194 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMR--QLTGPRSISSIFF 76
           +Y+H PFC   C +C     + R K+  E  ++ +  L E++     Q    ++I S++F
Sbjct: 42  IYIHVPFCDNICSFCS----MYRTKLEDELDDYTKYLLGEIEKYGKFQYLKAKNIRSVYF 97

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++++ +++  I++ I   + ++++ E ++E+   ++ ++  +     GVNR S+G
Sbjct: 98  GGGTPTILKERHLEPIINAIRSKFNIAADCEFSLESTLHNLNLSKLRLLESLGVNRFSIG 157

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           VQ+  ++  + L R      AI  + + R  F  M   D+I+  P+QT+ +   + +   
Sbjct: 158 VQTFSDRGRKLLNRVQGKKGAIEHLQMIRQNFSGMVCTDIIFNYPEQTLEEVLEDARLVD 217

Query: 196 SYAVDHLSLYQLTI 209
             ++D  S Y L +
Sbjct: 218 ELSIDSTSFYSLQL 231


>gi|52137550|emb|CAH33817.1| HutW protein [Photobacterium damselae subsp. damselae]
          Length = 463

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 4/213 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGG 78
           +YVH PFC  +C YC+F  +    ++  +++  + + E++   Q   T      +++ GG
Sbjct: 76  LYVHIPFCRVRCTYCNFFPYASSQQL-IDDYFAALMIELKLKAQQPWTQSAPFHAVYIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  +   I K++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 135 GTPTDLTAQQVKQLGTMIRKHFPLTTDCELTLEGRVNRFSDEMFDSALEGGFNRFSFGVQ 194

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  +  LA      +  DL+Y LP QT+  W+ +L+   + 
Sbjct: 195 SFDTQVRRKAKRLDDREVVLDRVAALAATDQAPIVIDLLYGLPYQTLDVWQQDLEDFRAS 254

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
               + LYQL    GT    +   G L  P++ 
Sbjct: 255 GAHGVDLYQLIEMGGTPMKNLIDKGKLPEPADT 287


>gi|209967082|ref|YP_002299997.1| coproporphyrinogen III oxidase [Rhodospirillum centenum SW]
 gi|209960548|gb|ACJ01185.1| oxygen-independent coproporphyrinogen-III oxidase, putative
           [Rhodospirillum centenum SW]
          Length = 498

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL---TGPRSISSIFFG 77
            YVH PFC   C +C F  +  R + G   ++ + + +M    +     GP  + +++ G
Sbjct: 105 AYVHVPFCENHCLFCGFYQNPWRAEAGAP-YVDAVIAQMAAFARTPAHAGP-PLQAVYLG 162

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +   +IA ++  I  +  ++ + EIT+E    S  +   +    AGV R+S GV
Sbjct: 163 GGTPTALSGPDIARLVRAIRTHLPLAPDCEITLEGRIHSFGLEKARAAFDAGVTRMSFGV 222

Query: 138 QSLEEQSLRFLGRNHNASEAIAA----IHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           QS  +   R LGR     + IA     + L R     +  DLIY LP QT      +++ 
Sbjct: 223 QSFSDTIRRPLGRKAPRRQLIAELEGLVALDRGA---IVADLIYGLPDQTPEDVAADVRL 279

Query: 194 ALSYAVDHLSLYQLTIEKGT 213
             +  +D   LY L +  GT
Sbjct: 280 CAALGLDGFDLYSLNVIPGT 299


>gi|152985311|ref|YP_001349140.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PA7]
 gi|150960469|gb|ABR82494.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa PA7]
          Length = 460

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 17/289 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +  + L +YVH PFC   C YC  N  + + +     ++   + E++ + R L+  + + 
Sbjct: 49  KAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLSREQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ + P  +  ++  +    N     + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLIYGLPKQTPDSFAR 228

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSAH-- 246
            +   L+   D LS++           +   + D  LPS    ++ L   T+ +T+A   
Sbjct: 229 TVDEVLALQPDRLSVFNYAHLPERFMPQRRINAD-ELPSPGHKLEMLQRTTEQLTAAGYR 287

Query: 247 --GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
             G+  + + +     A+    L      Y  +G  D +G+G  A S++
Sbjct: 288 YIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAISQI 336


>gi|237797597|ref|ZP_04586058.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331020447|gb|EGI00504.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 460

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  V + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVVTKDRSRAQLYLQRLEHEIQMLACHLAPGQVVKQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +  + +  ++  +   +T+    + + +IE +P   +       R+ G NR+SL
Sbjct: 114 GGTPTFLNHEELRRLMAQLRACFTLLDDDSGDYSIEIDPREADWATMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   L   
Sbjct: 174 GVQDLDPAVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTPDAFSGTLDEI 233

Query: 195 LSYAVDHLSLY 205
           ++   D LS++
Sbjct: 234 INLQPDRLSVF 244


>gi|91784925|ref|YP_560131.1| coproporphyrinogen III oxidase [Burkholderia xenovorans LB400]
 gi|91688879|gb|ABE32079.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia xenovorans LB400]
          Length = 461

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 39/313 (12%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFN-------SHVRRY--KVGQENFIQ 53
           YL A  +   G  S  L +Y H PFC   C YC  N       +H R Y  ++ +E  +Q
Sbjct: 41  YLRAAAD--PGASSTDLSLYFHIPFCDTVCFYCGCNKIATKNRAHARPYLDQLKREIALQ 98

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIE 111
           +   + +        R +S + +GGGTP+ +     A ++    +++T+   +  E +IE
Sbjct: 99  AVCFDTR--------RPVSQLHWGGGTPTFLSHDETAELMAATREHFTLLPDAEAEYSIE 150

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
            +P           RK G NR+SLGVQ  +    + + R        + +  AR+  F  
Sbjct: 151 VDPREASPETIAHLRKLGFNRLSLGVQDFDPVVQQAINRIQPLEMTASVMQAARDTGFHS 210

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSE 229
           +  DLIY LP QT+  +   L   +  A D LS++          +KM +  D   LPS 
Sbjct: 211 IGVDLIYGLPHQTVESFSRTLDTMIELAPDRLSVF--AYAHMPQLFKMQRQMDPATLPSP 268

Query: 230 NVAVD-LYNLTQSITSAH----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIG 277
           +V +  L  + + +T A     G+  + +       A++   L  N+  Y      D IG
Sbjct: 269 DVRLAILQRVVERLTGAGYVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIG 328

Query: 278 IGPGAHSRVKVGS 290
              GA S  KVG 
Sbjct: 329 F--GASSIGKVGD 339


>gi|220934411|ref|YP_002513310.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219995721|gb|ACL72323.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 465

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 7/204 (3%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A  +N +G+    L +YVH PFC   C YC  N  V + +     ++     E+     L
Sbjct: 49  AEASNASGR---PLSLYVHIPFCDTVCYYCACNKVVTKDRGRARPYLDRLYREIGLQAAL 105

Query: 66  -TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNF 122
               R +  +  GGGTP+ I  + +  ++  ++ ++ +      E  IE +P  V  +  
Sbjct: 106 FDNSRPVEQLHLGGGTPTFISHEEMTELMTILSSHFQLLDDDTGEYGIEIDPREVGGDTL 165

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R+ G NR+SLGVQ  + +  R + R   AS+ +  +  AR + F  +S DLIY LP 
Sbjct: 166 ALLRRLGFNRLSLGVQDFDPRVQRAVNRIQPASQTLHVLEEARQVGFRSISVDLIYGLPL 225

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   + + ++R +    D +S++
Sbjct: 226 QTPASFAVTVERMIEAGPDRISVF 249


>gi|86144489|ref|ZP_01062821.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|85837388|gb|EAQ55500.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
          Length = 469

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 6/232 (2%)

Query: 2   KYLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           K L  ++  M  +G   +   +Y+H PFC  +C +C+F  +    K+  E F  + + E+
Sbjct: 44  KKLEIFDELMLSEGKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKLVDEYF-DALMVEL 102

Query: 60  QWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
               + +  +S    +++ GGGTP+ + P  + L+   I +++ ++++VE+T+E   +  
Sbjct: 103 MQKAKTSWAQSGLFHAVYIGGGTPTDLSPLQVELLGKAIRQHFPLANDVEMTLEGRINRF 162

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLI 176
               F    + G NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+
Sbjct: 163 GDEMFARSLEGGFNRFSFGIQSFNTQVRRSAKRLDDREVVLERISSLSRTEQAPIVLDLL 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           Y LP Q+M  ++ +L+  +S     + LYQL +        + + G +  P+
Sbjct: 223 YGLPHQSMEVFQQDLEDYMSTGAHGIDLYQLIVSGNAPMLNLVEKGKIPPPA 274


>gi|237744381|ref|ZP_04574862.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229431610|gb|EEO41822.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 411

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 10/279 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++     +     
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYEFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + G
Sbjct: 94  EIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    +  +   +  F  +   D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTNEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +         D  S Y L I  G+   K   KD  + +       +L+NL  S     G
Sbjct: 214 QDADLLAEVGADSASFYSLMIHDGSNISKEREKDKSVYIYDLERDEELHNLFYSRCIEKG 273

Query: 248 LHAYEISNHSFLGAES---LHNLNYWRYGDYIGIGPGAH 283
               E++  +  G +S   + N N  +    IG+G G H
Sbjct: 274 YKLLELTKIT-NGKDSYKYIRNNNGLKNLLPIGVGAGGH 311


>gi|297539102|ref|YP_003674871.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
 gi|297258449|gb|ADI30294.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
          Length = 488

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A E       +  L +YVH PFC   C +C  N  V ++      +++    E+   
Sbjct: 63  YKLALEQRSIAGAALPLSIYVHIPFCESLCFFCACNKIVTKHHERSAEYLRYLNREIDLH 122

Query: 63  RQLTGPR-----SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
            +  G +     +IS +  GGGTP+      +  +++ + +N+  + N E +IE +P +V
Sbjct: 123 MEHLGTKKGSVHTISQLHLGGGTPTFFSDDELTELMNMLKRNFFFTPNGEYSIEVDPRTV 182

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                +   + G NR+S GVQ  + +  + + R   A +  + +  AR + F  ++ DLI
Sbjct: 183 NEQRLKHLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEQVFSLVEAARRLKFDSINVDLI 242

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLY 205
           Y LP QT   +   L + +    + ++LY
Sbjct: 243 YGLPMQTPESFTRTLNQIVELRPNRIALY 271


>gi|218676071|ref|YP_002394890.1| coproporphyrinogen III oxidase [Vibrio splendidus LGP32]
 gi|218324339|emb|CAV25688.1| Oxygen-independent coproporphyrinogen III oxidase [Vibrio
           splendidus LGP32]
          Length = 469

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 4/219 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           G+  +   +Y+H PFC  +C +C+F  +    K+  E F  + + E++   + +  +S  
Sbjct: 57  GKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKLVDEYF-DALMVELKQKAKTSWAQSGL 115

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++ GGGTP+ + P  + L+   I + + ++++VE+T+E   +      F    + G 
Sbjct: 116 FHAVYIGGGTPTDLSPLQVELLGKAIRQYFPLANDVEMTLEGRINRFGDEMFDRSLEGGF 175

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+Y LP Q+M  ++ 
Sbjct: 176 NRFSFGIQSFNTQVRRSAKRLDDREVVLERISSLSRTEQAPIVLDLLYGLPHQSMEVFQQ 235

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +L+  +S     + LYQL +        + + G +  P+
Sbjct: 236 DLEDYMSTGAHGIDLYQLIVSGNAPMLNLVEKGKIPPPA 274


>gi|258645175|ref|ZP_05732644.1| coproporphyrinogen oxidase PhuW [Dialister invisus DSM 15470]
 gi|260402524|gb|EEW96071.1| coproporphyrinogen oxidase PhuW [Dialister invisus DSM 15470]
          Length = 464

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 1/198 (0%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           G  +    VY+H PFC   C YC F       K   E              +    +S I
Sbjct: 59  GTPTQRAAVYIHIPFCRLSCTYCSFFKKKGDNKAQHEYVELLLKELESLSDKPYVKKSKI 118

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S++FFGGG P ++   ++A IL  I K + ++ + E+T+E++ S +           GV 
Sbjct: 119 SAVFFGGGAPGILSAGDMADILCAIKKTFLLAEDAEVTMESSLSDMTEEKMDVAIAGGVT 178

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R S G+QS   Q    +GR ++  E +  + +       +  DLIY LP +T      ++
Sbjct: 179 RFSFGIQSFNSQVRNTVGRPYSREEVLKQLSIYSKKKADIIIDLIYGLPYETEETMRQDI 238

Query: 192 QRALSYAVDHLSLYQLTI 209
           + A +  +  L LY+L +
Sbjct: 239 RDAAACGIAGLDLYKLQL 256


>gi|83593839|ref|YP_427591.1| coproporphyrinogen III oxidase [Rhodospirillum rubrum ATCC 11170]
 gi|83576753|gb|ABC23304.1| coproporphyrinogen III oxidase, anaerobic [Rhodospirillum rubrum
           ATCC 11170]
          Length = 469

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 97/187 (51%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H  +C + C +C  ++ V +      +++ + L+E   + ++L+GP  ++ + FGGG
Sbjct: 69  LYLHVAYCAEMCWFCGCHTRVTKRYDPVADYLDALLSESAMVAKRLSGPLKVTHVHFGGG 128

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++   +    +D +  ++ ++   EI +E +P +  ++  +   +AGV R S+GVQ 
Sbjct: 129 TPTILTADDFVRTIDTLRADFGLADVAEIAVEMDPRTATLDYVKAMARAGVTRASIGVQD 188

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++   + + R          I   R N    ++ DL+Y LP QT +     + +A++ A
Sbjct: 189 FKDDVQKAINRIQPIELVAQVIDWLRDNGISDINMDLVYGLPHQTTSSVLHTIDQAIAMA 248

Query: 199 VDHLSLY 205
              +SL+
Sbjct: 249 PRRVSLF 255


>gi|238026433|ref|YP_002910664.1| coproporphyrinogen III oxidase [Burkholderia glumae BGR1]
 gi|237875627|gb|ACR27960.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia glumae BGR1]
          Length = 463

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 9/224 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           + L +YVH PFC   C YC  N      +     +++    E+    +   P R I+ + 
Sbjct: 55  SELSLYVHIPFCATACFYCGCNRIATGNRAHAVPYLERLKRELALQAERFDPDRVITQLH 114

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +GGGTP+ +     A ++      + ++++   EI+IE +P +         R  G NR+
Sbjct: 115 WGGGTPTFLSDAQTAELMAATRACFPIAADDEAEISIEIDPRTAVPATLAHLRMQGFNRL 174

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +  R + R        + I  AR + +  +S DLIY LP+Q++  +   L 
Sbjct: 175 SLGVQDVDAEVQRSINRVQPIERTASLIAAARLVGYRSISVDLIYGLPRQSVATFARTLD 234

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK---DGDLVLPSENVAV 233
             +  A D +S++          +KM +   +  L  P+E VA+
Sbjct: 235 TVIELAPDRISVFGYA--HLPQLFKMQRRIDEAQLPPPAERVAL 276


>gi|167639002|ref|ZP_02397276.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0193]
 gi|177653884|ref|ZP_02935956.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0174]
 gi|254734343|ref|ZP_05192056.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Western
           North America USA6153]
 gi|167513132|gb|EDR88504.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0193]
 gi|172081112|gb|EDT66189.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0174]
          Length = 495

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +     G        +++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVCEIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    NV E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRAS 371


>gi|257452024|ref|ZP_05617323.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058573|ref|ZP_07923058.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684249|gb|EFS21084.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 406

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 25/234 (10%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQL 65
           E N +GQ    L +YVH P+C   C +C+ N    R +  QE  N+ +    E++     
Sbjct: 36  ETNPSGQ----LSLYVHTPYCDHICSFCNLN----RKQGNQEIDNYAKRLYKEIKNYGNF 87

Query: 66  TGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
              +S  I  IFFGGGTP++     +  IL  I  +++++ N E T E    ++      
Sbjct: 88  RFCKSSEIDVIFFGGGTPTIYSEAQLENILKTIHDSFSLAENCEFTFETTLHNLSQEKIF 147

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQ 182
              K GVNR+S+G+Q+   +  + L R  +    +  +   R+ F   +  D+IY  P+Q
Sbjct: 148 LLTKYGVNRLSIGIQTFSTRGRKLLNRRFSKEIVLKRLQKIRHSFHGTLCIDIIYNYPEQ 207

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGT----LF--------YKMHKDGDL 224
           T+ +   +++      +D +S Y L IE+ +    LF        Y + KD +L
Sbjct: 208 TIEELLEDVRHISDCHIDSVSFYSLIIEEKSKLSRLFQKNPFSFQYNLQKDKEL 261


>gi|84385281|ref|ZP_00988313.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
 gi|84379878|gb|EAP96729.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
          Length = 469

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 4/219 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           G+  +   +Y+H PFC  +C +C+F  +    K+  E F  + + E++   +    +S  
Sbjct: 57  GKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKLVDEYF-DALMVELKQKAKTPWAQSGL 115

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++ GGGTP+ + PQ +  +   I + + ++++VE+T+E   +      F    + G 
Sbjct: 116 FHAVYIGGGTPTDLSPQQVEQLGKAIRQYFPLANDVEMTLEGRINRFGDEMFDRALEGGF 175

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+Y LP Q+M  ++ 
Sbjct: 176 NRFSFGIQSFNTQVRRSAKRLDDREVVLERISSLSRTEQAPIVLDLLYGLPHQSMEVFQQ 235

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +L+  +S     + LYQL +        + + G +  P+
Sbjct: 236 DLEDYMSTGAHGIDLYQLIVSGNAPMLNLVEKGKIPPPA 274


>gi|330443887|ref|YP_004376873.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pecorum E58]
 gi|328806997|gb|AEB41170.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pecorum E58]
          Length = 464

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           L +Y H PFC   C YC     + R +   E++I + L E+  + Q  G +  +S I FG
Sbjct: 57  LSLYFHIPFCQSMCLYCGCTVILNRREEIVEDYINTLLQEISLISQELGMKFPVSRIHFG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISL 135
           GGTPS +       +   + K + +S   EI IE +P S+  ++   + ++  G NR+SL
Sbjct: 117 GGTPSRLSRYMFEKLFHQLHKCFDLSQTEEIAIEIDPRSLRNDMEKAEFFQNLGFNRVSL 176

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +      + R     E+       + + F  ++ DLIY LPKQT   +   +Q  
Sbjct: 177 GVQDTQAAVQEAVKRRQTHEESRRVYEKFKELGFTSINIDLIYGLPKQTRHTFAQTIQDI 236

Query: 195 LSYAVDHLSLY 205
           L+   D L+L+
Sbjct: 237 LAMRPDRLALF 247


>gi|153834543|ref|ZP_01987210.1| coproporphyrinogen III oxidase [Vibrio harveyi HY01]
 gi|148869062|gb|EDL68103.1| coproporphyrinogen III oxidase [Vibrio harveyi HY01]
          Length = 455

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 6/245 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           +N   +Y+H PFC  +C +C+F  +    K+  E F  + + E++    +   +S    +
Sbjct: 59  NNKRCLYIHVPFCRVRCTFCNFFQNAASRKLVDEYF-DALMKELREKAAMPWTQSGIFHA 117

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P+ I ++   I   + ++++ EIT+E   +      +QG    G NR 
Sbjct: 118 VYIGGGTPTDLSPEQIRILGQTIHDYFPLAADCEITLEGRINRFTDELYQGALDGGFNRF 177

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L 
Sbjct: 178 SFGVQSFNTQVRRSAKRLDDREDVLNRVSELAKEDKIPVIIDLLYGLPYQTKEVLEQDLN 237

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
             +S     L LYQL +        + + G +  P+       +Y L     + H +   
Sbjct: 238 DFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVKFMAKHHMKQL 297

Query: 252 EISNH 256
            + NH
Sbjct: 298 SV-NH 301


>gi|150390121|ref|YP_001320170.1| coproporphyrinogen III oxidase [Alkaliphilus metalliredigens QYMF]
 gi|149949983|gb|ABR48511.1| Coproporphyrinogen dehydrogenase [Alkaliphilus metalliredigens
           QYMF]
          Length = 502

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 133/285 (46%), Gaps = 20/285 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
           + +Y+  PFC  +C YC F S+ V ++    + +++    E+  + +L   ++  I +++
Sbjct: 180 VSLYISVPFCPTRCLYCSFPSNSVTQWGHLMDEYVEQLCVEITEIGKLLKQKNKKIETLY 239

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +   +   I   +  ++      EIT+EA  P ++++      +  G  R+S
Sbjct: 240 IGGGTPTTLHISHFDKIFQSVYASFDKDRIKEITVEAGRPDTIDLEKLAFLKSQGTTRVS 299

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ + +L+ +GR H+  + + A  +AR+  F  ++ DLI  LP +        ++ 
Sbjct: 300 INPQTMNDCTLQTIGRKHSVQDFLEACKMARDAGFENINMDLIIGLPGEDSEMVAYTMKE 359

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
               A  +L+++ L I+KG+   K  +  +L    E     +  +T++     GLH Y  
Sbjct: 360 IQKLAPTNLTVHTLAIKKGSNLIKDQEHYELSQHDE--IQKMLQITRNYAEKLGLHPYYM 417

Query: 252 ----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR 285
                     E   +S +G E ++N+         I +G G  S+
Sbjct: 418 YRQKHMLGNFENIGYSAIGYECIYNIQIMEEKQTIIAVGAGGVSK 462


>gi|312112138|ref|YP_003990454.1| coproporphyrinogen dehydrogenase [Geobacillus sp. Y4.1MC1]
 gi|311217239|gb|ADP75843.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y4.1MC1]
          Length = 501

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 33/295 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R  +I+
Sbjct: 174 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMREIGRFLKERGINIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + + +     V EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSISAEEMDQLYAVMYEAFPNIERVREITVEAGRPDTITPEKLNVLKKWNI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ D+I  LP + + ++  
Sbjct: 294 GRISINPQSYIQETLKAIGRHHTVDETIEKFHLAREMGMNNINMDVIIGLPGEGIKEFSH 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLF------YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            L +      + L+++ L+ ++ +        YK+   G++         ++    Q  T
Sbjct: 354 TLAQTEKLMPESLTVHTLSFKRASEMTKNKAKYKVAGRGEI--------SEMMKAAQDWT 405

Query: 244 SAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
             HG   Y            E   ++  G ES++N+         IG+G GA S+
Sbjct: 406 KRHGYVPYYLYRQKNILGNLENVGYALPGKESIYNIMIMEEQQSIIGLGCGASSK 460


>gi|257466175|ref|ZP_05630486.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917333|ref|ZP_07913573.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691208|gb|EFS28043.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 406

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E N +GQ    L +YVH P+C   C +C+ N      +V  +N+ +    E++       
Sbjct: 36  ETNPSGQ----LSLYVHTPYCDYICSFCNLNRKQGNQEV--DNYAKRLCKEIKNYGNFRF 89

Query: 68  PRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            +S  I  IFFGGGTP++     +  IL  I  +++++ N E T E    ++        
Sbjct: 90  CKSSEIDVIFFGGGTPTIYSETQLENILKTIHDSFSLAENCEFTFETTLHNLSQEKIFLL 149

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTM 184
            K GVNR+S+G+Q+   +  + L R  +    +  +   R+ F   +  D+IY  P+QT+
Sbjct: 150 TKYGVNRLSIGIQTFSTRGRKLLNRRFSKEIVLKRLQEIRHSFHGTLCIDIIYNYPEQTI 209

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGT----LF--------YKMHKDGDL 224
            +   +++      +D +S Y L IE+ +    LF        Y + KD +L
Sbjct: 210 EELLEDVRHISDCHIDSVSFYSLIIEEKSKLSRLFQKNPFSFQYNLQKDKEL 261


>gi|229016201|ref|ZP_04173151.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1273]
 gi|229022436|ref|ZP_04178973.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1272]
 gi|228738844|gb|EEL89303.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1272]
 gi|228745084|gb|EEL95136.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1273]
          Length = 496

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    +V E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQAFPDVKDVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|255039055|ref|YP_003089676.1| coproporphyrinogen III oxidase [Dyadobacter fermentans DSM 18053]
 gi|254951811|gb|ACT96511.1| oxygen-independent coproporphyrinogen III oxidase [Dyadobacter
           fermentans DSM 18053]
          Length = 454

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 5/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           + +Y+H PFC   C YC  N+ +      +  +IQ+ L E     +L G     I  +  
Sbjct: 52  ISLYIHLPFCESLCTYCGCNTRITINHAVESKYIQAVLKEWSMYCELFGDEKPVIRELHL 111

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+   P+N+  ++ G+     V ++     EA+P +    + +     G  RIS+G
Sbjct: 112 GGGTPTFFSPENLVNLVKGLLDKAYVHTDARFGFEAHPGNTTDAHLEALYSVGFRRISIG 171

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHL-ARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ      L  + R H   E +  + L AR I F  +++D++Y LP+Q        + R 
Sbjct: 172 VQDFNPVVLAMINR-HQTFEQVKHLTLKAREIGFTSVNYDIVYGLPQQKNCSMMQTMLRV 230

Query: 195 LSYAVDHLSLY 205
           +    D ++ Y
Sbjct: 231 IQLRPDRIAFY 241


>gi|126665806|ref|ZP_01736787.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
 gi|126629740|gb|EBA00357.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
          Length = 503

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 7/205 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A  +  TG+    L +Y H PFC   C YC  N  + + +   + ++Q  L E     +
Sbjct: 86  AAARSKATGR---PLSLYTHIPFCAHLCYYCACNKVITKKRNNAQPYVQRLLKEAAMQAE 142

Query: 65  LTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNN 121
           L G  R +  +  GGGTP+ +    +  ++ G  +  N     + + +IE +P  V+ + 
Sbjct: 143 LFGADRPVKQLHLGGGTPTFLPRDVMRELIHGYGELFNLQTDGSHDYSIEIDPREVDQDT 202

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                + G NRISLGVQ +  Q  + + R  +       ++ AR + F  ++ DLIY LP
Sbjct: 203 LSTLWELGFNRISLGVQDVNPQVQKAVNRVQSKEMTRGVLNEARRLGFGSINLDLIYGLP 262

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT   +   L+  +  + D LS++
Sbjct: 263 YQTPDSFAATLEEVIDMSPDRLSVF 287


>gi|163938782|ref|YP_001643666.1| coproporphyrinogen III oxidase [Bacillus weihenstephanensis KBAB4]
 gi|229010298|ref|ZP_04167507.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides DSM 2048]
 gi|229056635|ref|ZP_04196041.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH603]
 gi|229131808|ref|ZP_04260679.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST196]
 gi|229165809|ref|ZP_04293576.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH621]
 gi|163860979|gb|ABY42038.1| Coproporphyrinogen dehydrogenase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617623|gb|EEK74681.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH621]
 gi|228651646|gb|EEL07610.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST196]
 gi|228720704|gb|EEL72262.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH603]
 gi|228750993|gb|EEM00810.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides DSM 2048]
          Length = 496

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 107/204 (52%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G        +++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + + +    +V E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQAFPDVKDVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|264677954|ref|YP_003277861.1| oxygen-independent coproporphyrinogen III [Comamonas testosteroni
           CNB-2]
 gi|262208467|gb|ACY32565.1| oxygen-independent coproporphyrinogen III [Comamonas testosteroni
           CNB-2]
          Length = 460

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 3   YLSAYENNMTGQGSNSL--GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+ A +   T  GS +L   VYVH PFC   C YC  N  V ++      ++     E+ 
Sbjct: 37  YILALKQRKTHSGSRALPLSVYVHVPFCESLCYYCACNKIVTKHHEKAAEYLDYLSRELA 96

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              +  G  + +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V  
Sbjct: 97  MHTEHCGKGQLVSQLHLGGGTPTFFSDAELQQLMVLMREHFKLDPAGEYSIEVDPRTVSN 156

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +  +  G NR+S GVQ  +    + + R   A +  A +  AR + F  ++ DLIY 
Sbjct: 157 ERLRALKDMGFNRLSFGVQDFDPAVQKAVHREQPAEQVFALVAEARRLGFVSINVDLIYG 216

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP+QT   +   L +      D ++LY
Sbjct: 217 LPRQTPESFARTLAQVNELRPDRIALY 243


>gi|32266474|ref|NP_860506.1| coproporphyrinogen III oxidase [Helicobacter hepaticus ATCC 51449]
 gi|32262525|gb|AAP77572.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           hepaticus ATCC 51449]
          Length = 462

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           L +YVH PFC   C YC  N      +  ++++I     E+  + + +   R +    FG
Sbjct: 56  LSIYVHLPFCRSACYYCGCNVVYTSKEEKKQHYIHYLKKELALLSKYMDTSREVVQFHFG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+    + +  ++  I   +T  + + EI+ E +P        +  +  G NR+S G
Sbjct: 116 GGTPTFFNAKELQEVISLIRNTFTHFAPSAEISCEIDPRFFVREQMEVLKDNGFNRLSFG 175

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  E++    + R  +     AAI LAR      ++FDLIY LP Q    +   L++ +
Sbjct: 176 VQDFEDKVQEAVHRKQSVELVSAAISLAREFGINSVNFDLIYGLPFQNEVTFARTLEKVV 235

Query: 196 SYAVDHLSLY 205
           + + D L+++
Sbjct: 236 ALSPDRLAIF 245


>gi|313675750|ref|YP_004053746.1| oxygen-independent coproporphyrinogen iii oxidase [Marivirga
           tractuosa DSM 4126]
 gi|312942448|gb|ADR21638.1| oxygen-independent coproporphyrinogen III oxidase [Marivirga
           tractuosa DSM 4126]
          Length = 450

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 31/334 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSIS 72
           Q   S+ +Y+H PFC   C YC  N  + +    +E +I + L E   +++ L     I 
Sbjct: 45  QVDKSISLYMHLPFCESLCTYCGCNKRITKNHGVEERYIDALLAEWDIYVKALEEKPVIR 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I  GGGTP+    +N+  +L  I +   +      + E +P++      +     G +R
Sbjct: 105 NIHLGGGTPTFFSSENLHKLLFTILETSEIHPQKAFSFEGHPNNTTYEQLKVLADLGFDR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S GVQ    Q  + + R             AR + +  +++DLIY LP QT+   E  +
Sbjct: 165 VSFGVQDFNLQVQKAIHRIQPIENVRKTTAWARELGYTSVNYDLIYGLPFQTLVNIEENI 224

Query: 192 QRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPS------------------ENVA 232
           ++   +  + ++LY    +   +   + + D DL  P                   EN+ 
Sbjct: 225 EKLREFKPERIALYSYAHVPWKSKAQRGYGDEDLPKPDEKLAMYLRAKQLLNEMGYENIG 284

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
           +D Y L Q   +      Y   N +F+G  +  N         IG+G  A S       +
Sbjct: 285 MDHYALPQDELTIAKEKGY--LNRNFMGYTTDQNQM------MIGLGCSAISATGTAFVQ 336

Query: 293 VAISIEKHPESWL--KMVRKNGHAVVEKEFLSSE 324
               +EK+  + L  K+    GH + E+E  S++
Sbjct: 337 NEKVVEKYQTAVLDEKLPLTTGHFLTEEEETSAQ 370


>gi|167034824|ref|YP_001670055.1| coproporphyrinogen III oxidase [Pseudomonas putida GB-1]
 gi|166861312|gb|ABY99719.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida GB-1]
          Length = 460

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L +YVH PFC   C YC  N  + + +     ++Q    E+Q +    GP+  +  + FG
Sbjct: 54  LSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLIACHLGPKQRVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GVQDLDPAVQRAVNRLQSLEQTRTLIEAARTLQFRSVNLDLIYGLPKQTPEGFARTVEEV 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IRLQPDRLSVF 244


>gi|262067052|ref|ZP_06026664.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379261|gb|EFE86779.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 411

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 127/287 (44%), Gaps = 7/287 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++     +     
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTEYLCEEIKKYGAYEFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + G
Sbjct: 94  EVDVVFFGGGTPTIFKKEQLEKILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    +  +   +  F  +   D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKILNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTDEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +         D +S Y L I  G+   K   KD  + + S     +L+NL  S     G
Sbjct: 214 QDADLLAEVEADSVSFYSLMIHDGSDISKEREKDKSVYIYSLERDEELHNLFYSRCIEKG 273

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRV 293
               E++  +    +  +  N     + + IG GA  R++ +G++ +
Sbjct: 274 YKLLELTKLTNGKDKYQYIRNNNALKNLLPIGVGAGGRIQNIGAYNM 320


>gi|134094858|ref|YP_001099933.1| coproporphyrinogen dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133738761|emb|CAL61808.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Herminiimonas arsenicoxydans]
          Length = 476

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 8/210 (3%)

Query: 4   LSAYENNMTGQGSNS----LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ YE  + G  + +    L +Y+H PFC   C YC  N  V R +     ++     E+
Sbjct: 46  IADYERAVAGVRAKTEKRALSLYLHIPFCNTVCYYCGCNKIVTRDRSKAVTYLDYLKREV 105

Query: 60  QWM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSS 116
               R   G   I  + FGGGTP+ +  + +  ++  + + +T + +   E +IE +P +
Sbjct: 106 AMQGRLFAGMNQIEQLHFGGGTPTYLSDEQMDDLMAHLRRWFTFAPDAVGEYSIEIDPRT 165

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           V        R+ G NR+SLGVQ  +    + + R     + +  I  AR   F  +S DL
Sbjct: 166 VSRERIHTLRRQGFNRLSLGVQDFDPVVQKAVNRIQPEQQTLDIIAAARAADFRSVSVDL 225

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           IY LPKQT+T     L + ++   D +++Y
Sbjct: 226 IYGLPKQTLTTIGQTLDKVIAADPDRIAIY 255


>gi|228996172|ref|ZP_04155822.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock3-17]
 gi|229003776|ref|ZP_04161586.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock1-4]
 gi|228757466|gb|EEM06701.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock1-4]
 gi|228763588|gb|EEM12485.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock3-17]
          Length = 496

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++     V E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQSFPDVKEVREVTVEAGRPDTITPEKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARQMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|238018957|ref|ZP_04599383.1| hypothetical protein VEIDISOL_00817 [Veillonella dispar ATCC 17748]
 gi|237864441|gb|EEP65731.1| hypothetical protein VEIDISOL_00817 [Veillonella dispar ATCC 17748]
          Length = 475

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 23/287 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSI 74
             + +Y   PFC  +C YC F   + +    +  F+ +   +++ M+ +      S+ ++
Sbjct: 151 KKVSLYCGIPFCDTRCVYCSFPYGLYQDYTDKSQFLVALGRDIEDMKTIAQSYGLSVDTL 210

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+++  ++   IL  ++    V    E T+EA  P SV     +     GVNRI
Sbjct: 211 YMGGGTPTVLGDEDFHQILKQLS--ILVPEGHEFTVEAGRPDSVNPRKIRSMLDFGVNRI 268

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++  LR +GR H+A +    +   +   P  ++ D I  LP QTM      + 
Sbjct: 269 SINPQTMQDDILRRIGRGHSAQDIDELLQYVKVNTPFAVNMDFIAGLPHQTMQNMVENMD 328

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  ++++++ L +++G+  Y ++   D  +P E++  ++    +    A G   Y 
Sbjct: 329 YVCQNLPENVTIHTLALKRGSPLYDLNMQDD--IPEEHLVAEMVQYGKERLEAAGYVPYY 386

Query: 253 ISNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSR 285
           +    ++  + L N+ Y   G                + +GPG+ S+
Sbjct: 387 LYRQQYMRGQ-LENIGYTLPGKACEYNIQIMEERQSILSMGPGSSSK 432


>gi|260494066|ref|ZP_05814197.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260198212|gb|EEW95728.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 411

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 10/279 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++     +     
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYKFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + G
Sbjct: 94  EIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    +  +   +  F  +   D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTNEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +         D  S Y L I  G+   K   KD  + +       +L+NL  S     G
Sbjct: 214 QDANLLAEVGADSASFYSLMIHDGSDISKEREKDKSVYIYDLERDEELHNLFYSRCIEKG 273

Query: 248 LHAYEISNHSFLGAES---LHNLNYWRYGDYIGIGPGAH 283
               E++  +  G +S   + N N  +    IG+G G H
Sbjct: 274 YKLLELTKIT-NGRDSYKYIRNNNGLKNLLPIGVGAGGH 311


>gi|228989974|ref|ZP_04149949.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           pseudomycoides DSM 12442]
 gi|228769765|gb|EEM18353.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           pseudomycoides DSM 12442]
          Length = 496

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++     V E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQSFPDVKEVREVTVEAGRPDTITPEKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARQMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|88861020|ref|ZP_01135655.1| coproporphyrinogen III oxidase [Pseudoalteromonas tunicata D2]
 gi|88816948|gb|EAR26768.1| coproporphyrinogen III oxidase [Pseudoalteromonas tunicata D2]
          Length = 456

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/312 (23%), Positives = 142/312 (45%), Gaps = 18/312 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC + C YC  N  V R++   + ++     E+    +L     +  +  GG
Sbjct: 52  LSLYIHIPFCHQLCYYCGCNKIVTRHQHKADLYLDYLEQEITAQAKLYQHYEVEQLHLGG 111

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++   +  +++ + +++   ++ +  IE +P S+  N      + G NR+S G+Q
Sbjct: 112 GTPTFLDQAQMTRLINMLNQHFQFKADAQKGIEIDPRSLAENMLSVLFQLGFNRVSFGIQ 171

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              +   + + R   A      +  AR + F  ++ D+IY LP QT   +   + + +S 
Sbjct: 172 DFNDDVQKAVNREQCAENVANLVIEARQLGFKSVNADMIYGLPLQTPESFAATIDQLISL 231

Query: 198 AVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEI 253
           + D +S++    +       +  KD DL   ++ +A+    L Q   + +   G+  +  
Sbjct: 232 SPDRVSVFNYAHLPDRFAAQRKIKDQDLPCATDKLAMFKNTLAQMTAAGYVLIGMDHFAK 291

Query: 254 SNHSFLGAES---LHN--LNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES---WL 305
            + S   A+    LH     Y  +GD   +G G  S  +VG+     SI ++P+    + 
Sbjct: 292 KDDSLAIAQQQGLLHRNFQGYTTHGDCDLLGLGVSSISQVGN-----SIFQNPKELKGYY 346

Query: 306 KMVRKNGHAVVE 317
           + V  +G AV +
Sbjct: 347 QAVETSGIAVCK 358


>gi|315924152|ref|ZP_07920378.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622554|gb|EFV02509.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 512

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 14/205 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQ----WM--RQLTGPRSI 71
           + VYV  P C  KC YC F S +   K V   +++Q  ++E++    WM  RQL     +
Sbjct: 188 VSVYVGIPICPAKCSYCSFVSTIADKKGVLCADYLQGLISEIRQMGAWMIKRQL----RV 243

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAG 129
            +++ GGGTPS++  + I  +L  + ++  V S + E T EA  P +         +  G
Sbjct: 244 DTLYIGGGTPSVLSVRQIERLLAALKESRLVHSKLREFTFEAGRPETTTPEKLAVLKAFG 303

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V+R+ L  QS+  ++L  +GR H A++        R + F  ++ DLI  L ++T  Q+ 
Sbjct: 304 VDRLCLNPQSMNNETLAAVGRFHTAADIERVYRQIRGVGFGCVNMDLIAGLNQETPAQFL 363

Query: 189 MELQRALSYAVDHLSLYQLTIEKGT 213
             L R ++   ++L+++ L I+KG+
Sbjct: 364 TSLDRVVAMRPENLTVHSLAIKKGS 388


>gi|254487023|ref|ZP_05100228.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter sp.
           GAI101]
 gi|214043892|gb|EEB84530.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter sp.
           GAI101]
          Length = 451

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFG 77
           + +Y+H PFC + C +C   +   +     + ++ + L E+   R L     S+S +  G
Sbjct: 51  VSLYLHIPFCKRLCWFCACRTQGTKTMRPVDAYVDTLLIEIDRQRALLPADVSLSRLHLG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  +A +LD +   +   +  E ++E +P+             G+NR S+GV
Sbjct: 111 GGTPTILTPDIMARLLDRVFDRFARGAGFEFSVEIDPTEASAALLDTLIAYGMNRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +    +GR  + ++  A + HL       ++ DL+Y LP QT       L++ ++
Sbjct: 171 QDFDPKVQNAIGRQQSFAQTHATVAHLRAANLRSLNMDLLYGLPHQTGPGLTASLEQVMA 230

Query: 197 YAVDHLSLY 205
              D L+LY
Sbjct: 231 LQPDRLALY 239


>gi|333030130|ref|ZP_08458191.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
 gi|332740727|gb|EGJ71209.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
          Length = 455

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A E +     S+ +  Y+H PFC   C YC  NS     +   + ++++   E++ +
Sbjct: 34  YLKAIELSNHANPSH-ISFYLHIPFCRHLCHYCGCNSFPMMKQENIDRYVRAIFKEIEMV 92

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           + L    R I+ I +GGGTP+++    +  I D +   +    + EI IE +P  ++   
Sbjct: 93  KPLLNKNRKIAQIHYGGGTPTVLPVSVLKEINDRLLDGFETIQSPEIAIECHPGYLDEKY 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           +Q    A  NR SLG+Q  +EQ L+   R  +         + R    +++ D IY LP 
Sbjct: 153 WQDLTGAHFNRFSLGIQDFDEQVLKTANRRPSLIPVEHIFQILREADAKINMDFIYGLPL 212

Query: 182 QTMTQWEMELQRALSYAVDHLSLY-----------QLTIEKGTL 214
           QT+  +   + +A+    D L  +           QL +EK  L
Sbjct: 213 QTVESFSNTISKAIELNPDRLVTFSYAHVPWVSKRQLILEKAGL 256


>gi|290955363|ref|YP_003486545.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           scabiei 87.22]
 gi|260644889|emb|CBG67975.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces scabiei 87.22]
          Length = 456

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 5/207 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
            G+   +L +Y H PFC  +C +C+  + +         ++ +   +   +R+  G   P
Sbjct: 48  AGESRQALSLYAHIPFCEVRCGFCNLFTRIGAPDGLTGRYLDALERQAIAVREALGDEEP 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +E   +  + D   ++       + +++EA+P++   +      +
Sbjct: 108 VRFANAAFGGGTPTYLEAAELERLCDIAERHLGADLRAIPLSVEASPATATADRLAVLAE 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+SLGVQS   +  R   R    S+  AA+   R+   P ++ DLIY +  QT   
Sbjct: 168 RGTTRLSLGVQSFVAEEARAAVRPQRRSDVEAALGRIRDAGLPVLNIDLIYGIDGQTAAS 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGT 213
           W + L  AL++  + + LY L +   T
Sbjct: 228 WRLSLDAALAWRPEEIYLYPLYVRPLT 254


>gi|296447923|ref|ZP_06889832.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
 gi|296254560|gb|EFH01678.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
          Length = 448

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC   C YC  ++   R      ++ ++ L E++ +   T  R + SI +GG
Sbjct: 47  LSLYLHVPFCPAICTYCGCHTKALRQDAPLTSYKETLLREIELLAATTPARRVRSIHWGG 106

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++ P  +  +   + +++ +   +E  IE +P  V+    +   +AGVNR+SLGVQ
Sbjct: 107 GTPSMLGPSRLREVARVLGEHFRMDDALEHAIELDPRLVDPALAEALAEAGVNRVSLGVQ 166

Query: 139 SLEEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
                  +  GR   +   E   AI  A  +   ++FDL+Y LP+Q++       + A++
Sbjct: 167 DFNPHVQKAAGREQPYEVVERCVAILRAAGLTA-INFDLMYGLPEQSVEDVIRTAKLAVA 225

Query: 197 YAVDHLSLY 205
            A    +++
Sbjct: 226 LAPSRFAVF 234


>gi|304310627|ref|YP_003810225.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
 gi|301796360|emb|CBL44568.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
          Length = 469

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 25/289 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFF 76
           +L +YVH PFC  +C YC  +  V + +    +++   + E++ +  L G  R I  + +
Sbjct: 60  ALALYVHLPFCPTQCYYCACDRVVTQDRDKMRSYLDHLIKEIRLVAPLVGKTRPIVQLQW 119

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+  +   +  ++  + +++ +  S   +++IE +P SV V      R  G N IS
Sbjct: 120 GGGTPTYFDDSELTELMYHLGRHFNILASDRADVSIEIDPRSVSVERLGLLRGLGFNHIS 179

Query: 135 LGVQSLEEQSLRFLGR---NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           LGVQ    +  + + R        E +AA    R  F  ++ D IY LP Q +      +
Sbjct: 180 LGVQDFNREVQQGINRVLPEFRVEELVAAARSYR--FRSVNLDFIYGLPHQNLQTMLNTM 237

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +A++ + D +SL+   +     +       + VLPS    + + +   +   A G    
Sbjct: 238 AKAIALSPDQISLFSY-LHLPARYKAQGMLDEAVLPSPEERISMLSAVANQMLAAGY--V 294

Query: 252 EISNHSFLGAES--------------LHNLNYWRYGDYIGIGPGAHSRV 286
            I   SF+  ES               H     R  D +G+G  A S++
Sbjct: 295 RIGTDSFVKPESELGVAYAEGRLRRNFHGYIAHRSADLLGLGASAVSQI 343


>gi|331000042|ref|ZP_08323737.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|329572926|gb|EGG54546.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 489

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 23/239 (9%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFG 77
            YVH PFC  +C +C F  N +         N  I+ F    Q   Q + P  I +++FG
Sbjct: 74  AYVHIPFCESRCLFCMFYQNPYASEAADAYTNTLIKEFELWNQRAAQNSAP--IKALYFG 131

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +EP NI  ILD +  N  ++ + EIT E     +         + GVNR+S+GV
Sbjct: 132 GGTPTALEPYNIKKILDAVRTNLPLAEDCEITFEGRLHGLTDEKLSACVEGGVNRLSIGV 191

Query: 138 QSLEEQSLRFLGRNHNAS------EAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           Q+      + + R  +        E I+AI +LA  I      DL++  P Q    W  +
Sbjct: 192 QTFNADIRKEMQRLDSPEYIIRRLEKISAIDNLAVVI------DLLFGFPGQKGKVWTDD 245

Query: 191 LQRALSYAVDHLSLYQLTI-EKGTLFYKMHKDGDLVLPSENV--AVDLYNLTQSITSAH 246
           L+ A    +D +  YQL + EK  L  ++ K G L  P+  +  A D+Y  +    S+H
Sbjct: 246 LKIASELPIDGVDCYQLNVFEKSPLNTRI-KSG-LFDPAATLAEAADMYAESVEHFSSH 302


>gi|254471048|ref|ZP_05084451.1| HutW protein [Pseudovibrio sp. JE062]
 gi|211960190|gb|EEA95387.1| HutW protein [Pseudovibrio sp. JE062]
          Length = 449

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRS----ISS 73
           +Y+H PFC   C +C F     R K  +E+   +  + + E++   + + P S    I++
Sbjct: 60  MYLHVPFCANHCLFCGFY----RNKWQEEHSAPYADALIKELEL--EASSPTSQSAPINA 113

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTP+ +   ++A ++  I + + +S++ EIT+E      +         AG NR 
Sbjct: 114 VYFGGGTPTALHANDLARVIRRIRELYPLSADCEITVEGRIFHFDDEKIDACLDAGANRF 173

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS   +  +  GR     EAI      R+     +  DLI  LP Q+   W  +L+
Sbjct: 174 STGVQSFNTKVRKRQGRKATGEEAIRFFEGLRDRNRAAVVCDLILGLPYQSEEVWRQDLK 233

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             +   +D + LY L +  G+L  K    G
Sbjct: 234 TVVDLELDGVDLYTLAVFPGSLLSKAIAKG 263


>gi|229084075|ref|ZP_04216367.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-44]
 gi|228699224|gb|EEL51917.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-44]
          Length = 496

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 106/204 (51%), Gaps = 12/204 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RSIS 72
           + +Y+  PFC  KC YC F ++      G++  + SFL  + +  +  G         ++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIN---GRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEAN-PSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++     V E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQSFPDVKEVREVTVEAGRPDTITPEKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARQMGMNNINMDLIIGLPGEGLEIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L        + L+++ L+ ++ +
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRAS 372


>gi|303230760|ref|ZP_07317507.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514520|gb|EFL56515.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 441

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  + +Y   PFC  +C YC F   + +    Q  FI + L ++  +RQ+    +
Sbjct: 111 LESHSNKDISLYCGIPFCETRCVYCSFPYGLYQEYHRQSEFIAALLDDIDDVRQICETYN 170

Query: 71  I--SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
           +  ++++ GGGTP+++  ++   +L G++    +    E T+EA  P S+     Q  + 
Sbjct: 171 LHTNTLYMGGGTPTILNNEDFHHVLTGLST--LIPKGHEFTVEAGRPDSITTEKIQSMQA 228

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQ 186
             VNRIS+  Q++++  LR +GR H+A +      ++ ++    ++ D I  LP Q +  
Sbjct: 229 CHVNRISINPQTMDDTILRRIGRGHSAQDIDDMYQYVKKHTDFAVNMDFIAGLPGQNIKH 288

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L I++G+  Y ++   D  +P E++   +    Q      
Sbjct: 289 MVHNMDYICHNLPENVTIHTLAIKRGSPLYDLNMQHD--VPDESIVKHMVQYAQERLEQA 346

Query: 247 GLHAYEISNHSFLGAESLHNLNY 269
           G   Y +    ++  + L N+ Y
Sbjct: 347 GYVPYYLYRQQYMRGQ-LENIGY 368


>gi|297155981|gb|ADI05693.1| coproporphyrinogen III oxidase [Streptomyces bingchenggensis BCW-1]
          Length = 453

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 15/211 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             +  +SL +YVH PFC  +C +C+  + V       E  + ++L  ++  RQ    R  
Sbjct: 46  AAEPKDSLSLYVHIPFCEVRCGFCNLFTRV----GAPEGLVSAYLDALE--RQADTVRDA 99

Query: 71  ------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQ 123
                  ++  FGGGTP+ +E   +  + D  ++      + V +++EA+P++   +   
Sbjct: 100 LGDGARFATAAFGGGTPTFLEAAELERLCDIASRRMGADLAAVPLSVEASPATATADRLA 159

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
              + G  R+SLGVQS  +   R   R     +  AA+   R    P ++ DLIY +  Q
Sbjct: 160 VLAERGTTRLSLGVQSFVDAEARSAVRPQRREDVEAALGRIREAGIPVLNIDLIYGIDGQ 219

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           T   W   L  AL++  + L LY L +   T
Sbjct: 220 TERSWRQSLDAALAWRPEELYLYPLYVRPLT 250


>gi|84685201|ref|ZP_01013100.1| coproporphyrinogen III oxidase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84666933|gb|EAQ13404.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2654]
          Length = 451

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 12/241 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           QGS  + +Y+H PFC + C +C   +           ++ S   E++ ++    P  +IS
Sbjct: 47  QGSQ-ISLYLHVPFCRRLCWFCACRTQGTSTLSPVAAYVDSLTQELETLKSHLLPGITIS 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+L++P  I  +   I     +  N + ++E +P+ ++         AG+NR
Sbjct: 106 HLHWGGGTPTLLDPGMIERLSAAIFDTAPLGENAQFSVEIDPNEIDDARMDALVAAGLNR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEME 190
            SLGVQ  +      +GR        AA+    AR +   ++ DL+Y LP QT  +    
Sbjct: 166 ASLGVQDFDPMIQEVIGRPQTFEVTKAAVDGLRARGV-QSLNVDLLYGLPHQTNARMTDS 224

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL---VLPSENVAVDLYNLTQSITSAHG 247
           +++ LS   D ++L+        + +   + G +    LPS    ++L+NL++ +  A+G
Sbjct: 225 VKKVLSLGPDRIALFGYA----HVPWMARRQGLIPTEALPSPEERLELFNLSRDLFVANG 280

Query: 248 L 248
            
Sbjct: 281 F 281


>gi|254509740|ref|ZP_05121807.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacteraceae
           bacterium KLH11]
 gi|221533451|gb|EEE36439.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacteraceae
           bacterium KLH11]
          Length = 451

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 102/196 (52%), Gaps = 12/196 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----SI 71
           +S+ +YVH PFC + C +C      R      +N + +++  ++    L   R     ++
Sbjct: 49  SSISLYVHVPFCRRLCWFC----ACRTQGTQTDNPVIAYVDVLKAELDLLAARLPAGVTL 104

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S + +GGGTP+L+ P+ +  +   I +   +S N E ++E +P+ ++        +AG+N
Sbjct: 105 SRLHWGGGTPTLLSPELMRDLAARILERVPLSRNAEFSVEIDPNEIDEARLDALAEAGMN 164

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEM 189
           R S+GVQ  +++  + +GR  +      A+ +  AR I   ++ D++Y LP QT  +   
Sbjct: 165 RASIGVQDFDDEIQKTIGRIQSYDTTRRAVDMIRARGI-SSLNADILYGLPHQTRARMTE 223

Query: 190 ELQRALSYAVDHLSLY 205
            +Q+ LS   D ++LY
Sbjct: 224 SVQKLLSLTPDRVALY 239


>gi|309789572|ref|ZP_07684153.1| oxygen-independent coproporphyrinogen III oxidase [Oscillochloris
           trichoides DG6]
 gi|308228308|gb|EFO81955.1| oxygen-independent coproporphyrinogen III oxidase [Oscillochloris
           trichoides DG6]
          Length = 459

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 2/177 (1%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTG 67
           N++  +  + + +YVH PFC ++C YC  N+ V       + ++     E+  +  Q+  
Sbjct: 44  NDLATRTEDPISLYVHLPFCAERCTYCGCNATVTTRTDVVDKYLDHLEQELALVVPQMGA 103

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R +  + +GGGTP+ +    +  ++  + K++ + S+ E+ IE +P    V   +  R+
Sbjct: 104 QRRVVQMHWGGGTPNFLNQPQMERLVGLLNKHFAIDSDGEVAIEFDPRIGSVEQLEQIRE 163

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            G NRIS GVQ +       +GR     +       +R + F  ++ D++Y LPKQT
Sbjct: 164 LGFNRISFGVQDINPVVQEAIGRIQPFEQTEKLFRASRELGFSSVNVDMVYGLPKQT 220


>gi|313113519|ref|ZP_07799108.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624246|gb|EFQ07612.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 489

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 104/206 (50%), Gaps = 5/206 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E++ +R        
Sbjct: 155 GNEPGTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKMVQPYVDCLCREVEEIRIQADKAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
            + SI+ GGGTP+ +    +  ++  +  N+ +S  VE T+EA  P   +       ++ 
Sbjct: 215 KLCSIYIGGGTPTSLSADQLRQLMGTVRANFDLSKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  ++ L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDEVLAGIGRKHSAQDILDCYAEARKAGHDDINMDLIAGLPGDTVESF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
           E  L++A++   ++++++ LT+++ +
Sbjct: 335 ERSLRQAIALDPENITVHTLTLKRAS 360


>gi|301512719|ref|ZP_07237956.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB058]
          Length = 405

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 14/231 (6%)

Query: 26  PFCVKK----CPYCDFNSHVRRYKVGQE-NFIQSFLT-EMQWMRQLTGPRSISSIFFGGG 79
           P+C+      C +C F +  + YK  +E +F   FL+ E    ++      + S++ GGG
Sbjct: 4   PYCIPTDPPHCGFCLFPT--QDYKGKREMDFYLDFLSREAHLYKEFYQGAKLESLYVGGG 61

Query: 80  TPSLIEPQN---IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           TP+L++P +   +  ++  +  +  +SS +E+T+E  P     +  +  + AG NR+S+G
Sbjct: 62  TPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTLEGIPQLFNEDKIRAIKDAGFNRVSMG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ + ++ +   GR     +   AI L        + DLIY  P QT+     +L+  + 
Sbjct: 122 VQQVNDELIATSGRKQTRKQVFDAIELFHKYSLSCNVDLIYGWPNQTVEAMLRDLESIVQ 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             + H++ Y+L I   + F    K      PS    +++YN+ +    + G
Sbjct: 182 SGIKHITHYELNIAGRSDFATKQKQN---TPSIEKKIEMYNIAKQFLISKG 229


>gi|190894265|ref|YP_001984559.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
 gi|190699926|gb|ACE94009.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
          Length = 464

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 104/202 (51%), Gaps = 3/202 (1%)

Query: 7   YENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQ 64
           YE  +  QG++ ++ +Y+H PFC   C YC F + + R      +++     E++ +  Q
Sbjct: 55  YEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVAEQ 114

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  + 
Sbjct: 115 VPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEA 174

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQT 183
             + GVNR S+GVQS +    + + R  + ++ + A+ +L  +   R++FDL++ LP QT
Sbjct: 175 LERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLHGVRRINFDLMFGLPNQT 234

Query: 184 MTQWEMELQRALSYAVDHLSLY 205
           +         A++   D L+++
Sbjct: 235 VQSCLESAMLAIAMRPDRLAVF 256


>gi|303229369|ref|ZP_07316159.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515905|gb|EFL57857.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 459

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  + +Y   PFC  +C YC F   + +    Q  FI + L ++  +RQ+    +
Sbjct: 129 LESHSNKDISLYCGIPFCETRCVYCSFPYGLYQEYHRQSEFIAALLEDIDDVRQICESYN 188

Query: 71  I--SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRK 127
           +  ++++ GGGTP+++  ++   +L G++    +    E T+EA  P S+     Q  + 
Sbjct: 189 LHTNTLYMGGGTPTILNNEDFHRVLTGLST--LIPKGHEFTVEAGRPDSITTEKIQSMQA 246

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQ 186
             VNRIS+  Q++++  LR +GR H+A +      ++ ++    ++ D I  LP Q +  
Sbjct: 247 CHVNRISINPQTMDDTILRRIGRGHSAQDIDDMYQYVKKHTNFAVNMDFIAGLPGQNIKH 306

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +        ++++++ L I++G+  Y ++   D  +P E++   +    Q      
Sbjct: 307 MIHNMDYICHNLPENVTIHTLAIKRGSPLYDLNMQHD--VPDESIVKHMVQYAQERLEQA 364

Query: 247 GLHAYEISNHSFLGAESLHNLNY 269
           G   Y +    ++  + L N+ Y
Sbjct: 365 GYVPYYLYRQQYMRGQ-LENIGY 386


>gi|158333665|ref|YP_001514837.1| coproporphyrinogen III oxidase [Acaryochloris marina MBIC11017]
 gi|158303906|gb|ABW25523.1| oxygen-independent coproporphyrinogen III oxidase [Acaryochloris
           marina MBIC11017]
          Length = 464

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
            L +Y H PFC   C +C  N+ + + K   + ++Q  +  + Q   Q+   R++  + +
Sbjct: 55  PLSLYCHIPFCETPCFFCGCNTVITQRKQVADPYLQYLIRNIRQVAEQVGSDRNVHQLHW 114

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +    I L+ + +   ++     EI+IE NP  ++ N     R+ G NRIS G
Sbjct: 115 GGGTPNYLSWPQIELLWNALQDAFSFDPAAEISIEVNPCYIDRNTVFFLRELGFNRISFG 174

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  + Q    + R  +       I  +    F  ++ DLIY LP QT+T +   +Q+ +
Sbjct: 175 IQDFDPQVQIAVNRIQSEELLFNVISWIQEADFDSVNVDLIYGLPHQTVTTFANTVQKTI 234

Query: 196 SYAVDHLSLY 205
               D ++++
Sbjct: 235 QLNPDRIAVF 244


>gi|255656728|ref|ZP_05402137.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-23m63]
 gi|296452445|ref|ZP_06894146.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP08]
 gi|296877794|ref|ZP_06901820.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP07]
 gi|296258775|gb|EFH05669.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP08]
 gi|296431245|gb|EFH17066.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP07]
          Length = 518

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGP--RSIS 72
            N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + + 
Sbjct: 190 KNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKIIRETNKEVE 249

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V+
Sbjct: 250 TLYIGGGTPTTLDEEELDLLINSLFNELDLSKIREFTVEAGRPDTITEQKLRVLKKHNVS 309

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  Q++ + +L  +GR H  S+ +   ++AR + F  ++ D+I  L  + +   +  
Sbjct: 310 RISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEDLNMVKNT 369

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLF------YKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           L      + + L+++ L I++ +        YK H      L      V + +L+     
Sbjct: 370 LDEIKKLSPESLTVHTLAIKRASNLNINMDRYKEH------LTQYEEMVKMIDLSMKYAK 423

Query: 245 AHGLHAYEISNHSFL------------GAESLHNLNYW--RYGDYIGIGPGAHSR-VKVG 289
             GL+ Y +     +            G E ++N+     +  +Y  +G GA S+ V V 
Sbjct: 424 DMGLNPYYMYRQKHMLGNLENIGYAKEGYECIYNIQIMEEKQSNY-ALGAGAISKFVYVD 482

Query: 290 SHRV-----AISIEKHPESWLKMVRKNGHAV 315
             R+       ++E++ E   +M+++    V
Sbjct: 483 EDRIERVENVKNVEQYIERVDEMIKRKKEEV 513


>gi|327480442|gb|AEA83752.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri DSM 4166]
          Length = 460

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 9/234 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           Q S  L +YVH PFC   C YC  N  + + +   + +++    E++ +   L   + + 
Sbjct: 49  QASRPLSLYVHLPFCANVCYYCGCNKIITKDRGRAQPYLERLEKEIELISCHLGKDQLVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + +++ +  +   + +IE  P   +       R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRRLMKHLRQHFNLQDDDHGDFSIEVAPREADWPTIGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+GVQ L+    R + R     +    I  AR + +  ++ DLIY LP QT  ++  
Sbjct: 169 NRISIGVQDLDPDVQRAINRMQTLEQTRTIIEAARTLQYRSLNIDLIYGLPLQTPARFAK 228

Query: 190 ELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++  +    D LSL+    + +     +     DL  P+E +A+    L QSI
Sbjct: 229 TVEAIIDLQPDRLSLFNYAHLPERFAPQRRINASDLPAPAEKLAM----LEQSI 278


>gi|1515308|emb|CAA66617.1| oxygen-independent coproporphyrinogen III dehyrogenase [Pseudomonas
           aeruginosa PAO1]
          Length = 460

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 19/290 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +  + L +YVH PFC   C YC  N  + + +     ++   + E++ + R L+  + + 
Sbjct: 49  KAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLSRAQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ + P  +  ++  +    N     + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLIYGLPKQTPDSFAR 228

Query: 190 ELQRALSYAVDHLSLYQLT--IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH- 246
            +   ++   D LS++      E+     +++ D DL  P + + + L   T+ + +A  
Sbjct: 229 TVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEM-LQRTTEQLAAAGY 286

Query: 247 ---GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
              G+  + + +     A+    L      Y  +G  D +G+G  A S++
Sbjct: 287 RYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAISQI 336


>gi|254246110|ref|ZP_04939431.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia cenocepacia PC184]
 gi|124870886|gb|EAY62602.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia cenocepacia PC184]
          Length = 507

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 5/239 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R +
Sbjct: 95  GASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMALQAALFDPSRPV 154

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    +++ ++  ++ E +IE +P +V        R  G
Sbjct: 155 TQLHWGGGTPTFLSDDETVELMAATREHFALAPDADAEFSIEIDPRTVTPATLVHLRTIG 214

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY LP QT+  + 
Sbjct: 215 FNRLSLGVQDFDPVVQQAINRIQPLAMTADLLGAARATGFHSVSVDLIYGLPHQTVAVFA 274

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  +  A D LS++        LF    +  D  LP     + L  L   + ++ G
Sbjct: 275 RTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDAALPPPETRIALLGLAIDMLTSAG 332


>gi|146296038|ref|YP_001179809.1| coproporphyrinogen III oxidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409614|gb|ABP66618.1| coproporphyrinogen III oxidase, anaerobic [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 486

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 9/208 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLT--GPRSI 71
           S++  +Y+  P C  KC YC F+ H   +R +     + Q+ LTE++   +L       I
Sbjct: 167 SSAACLYIGIPICPTKCLYCSFSCHELTKRIESLLSLYTQALLTELEKTYKLIEENKNKI 226

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRK 127
            +I+FGGG+P++I  QNI  I + +  N  V    E T EA  P ++    +     Y+K
Sbjct: 227 VAIYFGGGSPAVIGVQNIKRIFESLFANLDVKDIRETTFEAGRPDTINRELLELLALYKK 286

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
               R+ +  Q+  +Q+L+ +GRNH   +   A  LA+   F  ++ D+I  LP +    
Sbjct: 287 DFNIRLCINPQTSNDQTLKIIGRNHTFDDIKKAFELAKEYGFENINSDVILGLPNEIEED 346

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTL 214
           ++  +   L+     ++++ L+I++ +L
Sbjct: 347 FKKTIYDVLNLGPASITVHTLSIKRASL 374


>gi|297587319|ref|ZP_06945964.1| possible coproporphyrinogen oxidase [Finegoldia magna ATCC 53516]
 gi|297575300|gb|EFH94019.1| possible coproporphyrinogen oxidase [Finegoldia magna ATCC 53516]
          Length = 435

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 6/234 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y++ PFC  +C YC F + V +    +E ++   L E+  + +      I +I+ GGG
Sbjct: 125 NIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEVSKNIDKNIIKTIYVGGG 184

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEA-NPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+ ++   +  +L  + +N  VS N VE T EA    S++ +  +  +K  V RISL  
Sbjct: 185 TPTSLDYTMLEKLL-KVIENCFVSENLVEYTFEAGREDSLDFDKLKLLKKYNVTRISLNP 243

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+  E++L+ +GR  N    +     A+N+   ++ D I  L    +   E  L+     
Sbjct: 244 QTFNEKALKAMGRIQNNENLLDLYTQAKNLGFVINMDFILGLLYDDVNNTEKNLEILRQL 303

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             D+++ + L+I+KG+ + + +  G+     EN+A     L +  T  +    Y
Sbjct: 304 QPDNITFHTLSIKKGSKYSQQYDKGNF---KENIAEKQMQLIKKWTFQNNYRPY 354


>gi|146300297|ref|YP_001194888.1| coproporphyrinogen III oxidase [Flavobacterium johnsoniae UW101]
 gi|146154715|gb|ABQ05569.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacterium
           johnsoniae UW101]
          Length = 454

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 9/255 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           N + +Y+H PFC   C +C  N  + +    +E +IQ+ L E +   +L   R  I  I 
Sbjct: 50  NGISLYIHLPFCESMCTFCGCNKRITKNHTVEEKYIQAVLKEWRLYCKLLPERPLIKEIH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+     N+  +++GI      + N E + E +P++   +  +     G  R+S 
Sbjct: 110 LGGGTPTFFSAHNLEHLINGIFSFANKAENHEFSFEGHPNNTTYDQLKRLYDLGFRRVSF 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   E+  + + R             A+ I +  +  D+I+ LP QT+      +++ 
Sbjct: 170 GVQDYSEKVQKAINRIQPFHNVAKVTFWAKEIGYTSIGHDIIFGLPFQTVEDVIDTVEKT 229

Query: 195 LSYAVDHLSLY---QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            S   D L+ Y    +   KG      +++    LP +     LY   + + SA+G H  
Sbjct: 230 NSVKPDRLAFYSYAHVPWIKGNGQRGFNEEN---LPKDGEKRKLYETGKLLLSANGYHEI 286

Query: 252 EISNHSFLGAESLHN 266
            + +H  L ++SL++
Sbjct: 287 GM-DHFALKSDSLYH 300


>gi|307941450|ref|ZP_07656805.1| oxygen-independent coproporphyrinogen III oxidase [Roseibium sp.
           TrichSKD4]
 gi|307775058|gb|EFO34264.1| oxygen-independent coproporphyrinogen III oxidase [Roseibium sp.
           TrichSKD4]
          Length = 474

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 6/172 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
           S++L +Y+H P+C + C YC  ++   R +     + ++   E++ +   LT   S+  I
Sbjct: 60  SDTLSLYLHVPYCREICHYCGCHTKATRKEAPLVAYAKTLRQEIELVAAHLTSAGSVRHI 119

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTPSL+   ++  I   +   +  +++VE  IE +P +V     +  +K GVNR S
Sbjct: 120 HWGGGTPSLLPHTDLLQITQDLQDRFQFAADVEHAIELDPRNVTPALAETLQKMGVNRAS 179

Query: 135 LGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           LGVQ  +    + +GR       ++A+A +H        ++FDL+Y LP+QT
Sbjct: 180 LGVQDFDLTVQKAIGRVQPFDLVAKAVADLHAVG--LTDLNFDLMYGLPEQT 229


>gi|21231539|ref|NP_637456.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768404|ref|YP_243166.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113221|gb|AAM41380.1| oxygen-independent coproporphyrinogen III oxidase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66573736|gb|AAY49146.1| oxygen-independent coproporphyrinogen III oxidase [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 470

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 8/253 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIF 75
            +L +YVH PFC   C YC  N  + R     + ++   L E       L   R+I  + 
Sbjct: 61  RALSLYVHVPFCSSPCFYCGCNRIITRDATKGQAYVARLLREATSAAEHLERSRTIVQLH 120

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGVNRI 133
            GGGTP+ + P  +  +LDG+ + +  S++   +I+IE +P +V+  +     + G  R+
Sbjct: 121 LGGGTPNFLSPALLGDLLDGLRRIFRFSTDPGRDISIELDPRAVQSGDVAALAQIGFTRV 180

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+Q  +      + R     E +  I   R      ++ DL+Y LP+QT   +   L 
Sbjct: 181 SLGIQDFDPDVQAAINRRQGEQETLELIAACRQAGIASVNVDLVYGLPRQTQAGFARTLD 240

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAY 251
           R L+   D L++Y          +K  +  D+  LPS    + L  L     SA G + Y
Sbjct: 241 RVLAARPDRLAIYGYA--HMPHVFKAQRQIDVQELPSAQDRLALLGLAVHTLSAAG-YQY 297

Query: 252 EISNHSFLGAESL 264
              +H  L +E L
Sbjct: 298 IGMDHFALPSEDL 310


>gi|157963155|ref|YP_001503189.1| coproporphyrinogen III oxidase [Shewanella pealeana ATCC 700345]
 gi|157848155|gb|ABV88654.1| Coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
          Length = 479

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 7/209 (3%)

Query: 21  VYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC K+C +C+F    ++  R     +N  Q     +     L   R  ++++ G
Sbjct: 58  LYIHIPFCRKRCTFCNFFENGTNPERISRYIKNLTQQL--HIAADTPLAQSRGFNTVYVG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ I    +  + + I++ + +  N E+T+E   +  + + +      G NR S GV
Sbjct: 116 GGTPTDISSDEVKQLGEAISR-FPLVDNAEVTLEGRLNGFDDDKWHNATANGFNRFSFGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q  +  GR  +    +  +  L+++    +  DLI+ LP QT+  W+ +LQ  + 
Sbjct: 175 QSFDTQVRQAAGRFDDKDFLLNRLQQLSQHPSASIVIDLIFGLPGQTLDVWQQDLQAVID 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             V  + LYQL    GT      + G ++
Sbjct: 235 SGVHGVDLYQLIGLSGTRIEHAREKGKIL 263


>gi|225850864|ref|YP_002731098.1| oxygen-independent coproporphyrinogen III oxidase [Persephonella
           marina EX-H1]
 gi|225646551|gb|ACO04737.1| oxygen-independent coproporphyrinogen III oxidase [Persephonella
           marina EX-H1]
          Length = 461

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 22/204 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
           + +    L +Y H PFC   C +C  N  + R K   + +++    EM  M  L    R 
Sbjct: 50  SNKRKTPLSLYFHIPFCESACHFCGCNVIITRRKEVVQPYLEHLFKEMDIMCSLLDRSRK 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +E      +++ I K +    N E++IE +P  V        RK G 
Sbjct: 110 VVQLHWGGGTPNYLEDDQTVKLMEEIKKRFDFDENAEMSIEVDPRHVTKERIFLLRKIGF 169

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-----------DLIYAL 179
           NRIS G+Q            N    EA+  I     IF  MS+           DLIY L
Sbjct: 170 NRISFGIQDF----------NPKVQEAVNRIQPEELIFNVMSWIREAGFESVNIDLIYGL 219

Query: 180 PKQTMTQWEMELQRALSYAVDHLS 203
           P QT+  +   +++ +    D ++
Sbjct: 220 PYQTLETFTETVEKVIKLNPDRIA 243


>gi|168208635|ref|ZP_02634260.1| putative ferrochelatase [Clostridium perfringens B str. ATCC 3626]
 gi|170713018|gb|EDT25200.1| putative ferrochelatase [Clostridium perfringens B str. ATCC 3626]
          Length = 480

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 127/254 (50%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++     +       D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCKMIKELNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|317504515|ref|ZP_07962491.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           salivae DSM 15606]
 gi|315664376|gb|EFV04067.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           salivae DSM 15606]
          Length = 460

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 9/238 (3%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A E +      N +  Y+H PFC   C YC  NS           + ++   E+  +
Sbjct: 39  YLKAVETSNDATADN-ISFYIHMPFCRHLCHYCGCNSVAMAKPDRITEYFETLHKEIDLL 97

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L   R IS I +GGG+PS +    I  I + +   +      EI IE +P  ++  +
Sbjct: 98  LPHLRKDRRISQIHYGGGSPSSMPLHFIRSINEHLLSAFETIDRPEIAIECHPGYLKEED 157

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           +     +G NR SLG+Q   ++ LR + R          + + R    +++FD IY LPK
Sbjct: 158 WNYLLDSGFNRFSLGIQDFNDEVLRCVNRQPALLPVETIMKILREGGAKVNFDFIYGLPK 217

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLY 236
           Q+++ +   +++A+S   D L  +       +LF +   + K G   LPS+N  + ++
Sbjct: 218 QSVSAFVSTIKKAISLRPDRLVTFSYA-HLPSLFKRQMILEKAG---LPSQNEKLKMF 271


>gi|227821562|ref|YP_002825532.1| coproporphyrinogen III oxidase [Sinorhizobium fredii NGR234]
 gi|227340561|gb|ACP24779.1| HemN coproporphyrinogen III oxidase [Sinorhizobium fredii NGR234]
          Length = 450

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 16/194 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--------PRSIS 72
           +Y+H PFC   C YC  ++ + +         Q  L  +  +RQ  G        P +I 
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITQRD-------QPILDYLDMLRQEIGLVAARTKAPLNID 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTP++++P+ +  ++  + + +  +   EI +E +P ++E        +AGV R
Sbjct: 103 HVHFGGGTPTIMQPEEMLALVRLLRERFDFADTAEIAVEIDPRTLEQEMATALGEAGVRR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +    + + R  +  + + A+  L R     ++FDLIY LP QT+       
Sbjct: 163 ASLGVQSFDPVVQKAINRIQSEEQTMEAVSRLRRAGVDSINFDLIYGLPHQTVESCIETA 222

Query: 192 QRALSYAVDHLSLY 205
           + A++   D  +++
Sbjct: 223 KAAIAMGPDRFAVF 236


>gi|104780944|ref|YP_607442.1| coproporphyrinogen III oxidase [Pseudomonas entomophila L48]
 gi|95109931|emb|CAK14636.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Pseudomonas entomophila L48]
          Length = 460

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 17/289 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           + +  L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  + 
Sbjct: 49  RATRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLIACHLDPKQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSHVELRQLMATLRQHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSLGVQDLDPAVQRAVNRLQSLEQTRTLIEAARTLQFRSINLDLIYGLPKQTPEGFAR 228

Query: 190 ELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-- 246
            ++  +    D LS++    + +  +  +     DL  P+  + + L+     +T+A   
Sbjct: 229 TVEEVIRLQPDRLSVFNYAHLPERFMPQRRIDSADLPAPAAKLEM-LHATIDQLTAAGYR 287

Query: 247 --GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
             G+  + + +     A+    L      Y  +G  D IG+G  A S++
Sbjct: 288 YIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAISQI 336


>gi|253996086|ref|YP_003048150.1| coproporphyrinogen III oxidase [Methylotenera mobilis JLW8]
 gi|253982765|gb|ACT47623.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           mobilis JLW8]
          Length = 482

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +YVH PFC   C +C  N  V ++      +++    E+   +  L   ++IS +  G
Sbjct: 77  LSIYVHIPFCESLCFFCACNKIVTKHHERSAEYLRYLSREIDLHVEHLGAGQTISQLHLG 136

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+    + ++ ++  I +++ ++ N E +IE +P +V           G NR+S GV
Sbjct: 137 GGSPTFFSDEELSELMAMIRRSFVLAPNGEYSIEVDPRTVNEQRLAHLASLGFNRLSFGV 196

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  + + R   A +  + +  AR + F  ++ DLIY LPKQ+   +   L + + 
Sbjct: 197 QDFDPEVQKAVHRIQPAEQVFSLVEAARRLKFDSVNADLIYGLPKQSPESFSKTLSQIVE 256

Query: 197 YAVDHLSLY 205
              + ++LY
Sbjct: 257 LRPERIALY 265


>gi|114800144|ref|YP_759283.1| coproporphyrinogen III oxidase [Hyphomonas neptunium ATCC 15444]
 gi|114740318|gb|ABI78443.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomonas
           neptunium ATCC 15444]
          Length = 450

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 6/191 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           +  Y+H PFC K C YC   + V     +VG+  +    L E+       GP   ++ + 
Sbjct: 47  VSAYLHIPFCEKLCWYCGCATSVPNGYRRVGE--YTDLLLKEISLKADAMGPHGGLAHLH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+++ P +   + D + +++ +    EI +E +P +++      + +AGVNR SL
Sbjct: 105 FGGGSPNILSPADFLELADAMRRSFGLREGAEIAVELDPRTMQAGQVAAFARAGVNRASL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+L +   + + R       +A I   R +    ++ DL+Y LP QT        Q A
Sbjct: 165 GVQTLADDVQQAINRVQPREMVVALIEDLRGVGIGAINMDLMYGLPYQTTQHVAQAAQFA 224

Query: 195 LSYAVDHLSLY 205
                  +S++
Sbjct: 225 AEMGAARVSVF 235


>gi|254514099|ref|ZP_05126160.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
 gi|219676342|gb|EED32707.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
          Length = 501

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 4/194 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +++L +YVH PFC   C YC  N  V R +    ++I     E+    QL G  R ++ +
Sbjct: 89  ADALSLYVHLPFCHDICYYCGCNKVVTRKEGVAAHYINELTKELDMQSQLVGKNRPVTQM 148

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNR 132
            +GGGTP+ +    +  ++  +A  + +      E +IE +P +V        +  G NR
Sbjct: 149 HWGGGTPTYLNDGEVTELMHNLASRFRLLDKGYREYSIEIDPRTVSPATIALLKGVGFNR 208

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ  +    + + R     +    +   R + F  +SFDLIY LP Q        L
Sbjct: 209 ISLGVQDFDPAVQKAVNRIQPYRQVADLVSAVRAHGFRSLSFDLIYGLPYQDHLSMAETL 268

Query: 192 QRALSYAVDHLSLY 205
           ++ +S   D ++ Y
Sbjct: 269 RKVISLRPDRIACY 282


>gi|254234647|ref|ZP_04927970.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa C3719]
 gi|126166578|gb|EAZ52089.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa C3719]
          Length = 460

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 19/290 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +  + L +YVH PFC   C YC  N  + + +     ++   + E++ + R L+  + + 
Sbjct: 49  KAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLSREQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ + P  +  ++  +    N     + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSPGQLRELMSQLRSHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLIYGLPKQTPDSFAR 228

Query: 190 ELQRALSYAVDHLSLYQLT--IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH- 246
            +   ++   D LS++      E+     +++ D DL  P + + + L   T+ + +A  
Sbjct: 229 TVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEM-LQRTTEQLAAAGY 286

Query: 247 ---GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
              G+  + + +     A+    L      Y  +G  D +G+G  A S++
Sbjct: 287 RYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAISQI 336


>gi|149194368|ref|ZP_01871465.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
 gi|149135543|gb|EDM24022.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
          Length = 450

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 16/243 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSIS 72
           + +  + +Y H PFC   C +C  N         +  +I     E++ W + L   R + 
Sbjct: 39  KSNKPISLYFHLPFCKSACYFCGCNVVYTSKADKRRRYIDYLKKELKLWSKYLDTNRLVR 98

Query: 73  SIFFGGGTPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + FGGGTP+   P+ +  I + I    KN+   S+ EI++E +P   + N+ +  +K G
Sbjct: 99  QLHFGGGTPTFFTPEELEEIFELIYLYFKNF--ESDAEISVEIDPRFFDENHMKVLKKYG 156

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+S GVQ   EQ+ + + R         A+ +AR      ++ DLIY LP Q +  ++
Sbjct: 157 VNRVSFGVQDFNEQTQKAVNRIQPFDLTKKAVDIARKYGINSINIDLIYGLPYQALETFK 216

Query: 189 MELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             L+       D L+++       ++KG     M K  +  LP+    + ++  T     
Sbjct: 217 KTLKLVKELNPDRLAVFNYAHVPWLKKG-----MRKIDETTLPAPEEKLKIFKYTIDFFE 271

Query: 245 AHG 247
            +G
Sbjct: 272 NNG 274


>gi|90410563|ref|ZP_01218579.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
 gi|90328804|gb|EAS45088.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
          Length = 475

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 2/212 (0%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGG 79
           +YVH PFC  +C YC+F  +     +  + F    +  E++  +  T      +++ GGG
Sbjct: 74  LYVHIPFCRVRCTYCNFFQYASSQSLIDDYFAALMVELELKAGQAWTQAAPFHAVYIGGG 133

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    I  +   I +++ ++++ E+T+E   +      F    + G NR S GVQS
Sbjct: 134 TPTDLTAAQIKRLGQMIRQHFPLTTDCELTLEGRINRFTDEMFDSALEGGFNRFSFGVQS 193

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + Q  R   R  +    +  I  L+ +    +  DL+Y LP Q +T W+ +L+  L   
Sbjct: 194 FDTQVRRKAKRLDDKDVVLERIQALSSSESAPIVIDLLYGLPYQDLTVWQQDLKDFLDSG 253

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              + LYQL    GT    + ++G L  P++ 
Sbjct: 254 AHGVDLYQLIEMGGTPMKGLVENGRLPEPADT 285


>gi|75910032|ref|YP_324328.1| coproporphyrinogen III oxidase [Anabaena variabilis ATCC 29413]
 gi|75703757|gb|ABA23433.1| coproporphyrinogen III oxidase, anaerobic [Anabaena variabilis ATCC
           29413]
          Length = 460

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 6/195 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           + + +Y H PFC   C +C  N+ +   K   + +++  + E++    L  P R +  + 
Sbjct: 55  SPISLYFHIPFCQSSCYFCGCNTVISNNKNIAKPYLEHLVKEIKHTSNLIDPDRKVLQVH 114

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ ++   +  +   I +++ +    EI+IE NP  V+ N     R+ G NRIS 
Sbjct: 115 WGGGTPNYLDCDQVEFLWKHIHRHFNIDPQAEISIEINPRYVDQNYISFLREIGFNRISF 174

Query: 136 GVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           G+Q    Q  + + R          ++ I  A+  F  ++ DLIY LP QT+  +   ++
Sbjct: 175 GIQDFNSQVQKAVNRIQPEELLVNVMSWIKAAK--FDSVNVDLIYGLPHQTLQTFRETVK 232

Query: 193 RALSYAVDHLSLYQL 207
           + ++   D + ++  
Sbjct: 233 KTVALDPDRIVVFNF 247


>gi|319956016|ref|YP_004167279.1| oxygen-independent coproporphyrinogen iii oxidase [Nitratifractor
           salsuginis DSM 16511]
 gi|319418420|gb|ADV45530.1| oxygen-independent coproporphyrinogen III oxidase [Nitratifractor
           salsuginis DSM 16511]
          Length = 455

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 8/237 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           +  L +YVH PFC   C +C  N      +     ++     E++ +  Q+   R +   
Sbjct: 45  TGPLSLYVHLPFCRSACYFCGCNVVFTSKEEKLSEYVDYLKREIELLADQIDTSREVIQF 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAK---NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            FGGGTP+  +   +  I+  I K   NW  S   EI++E +P     +  + ++  G N
Sbjct: 105 HFGGGTPTYYKAFELDEIMKHIKKHFPNW--SEEAEISVEIDPRFFNEDQMKVFKSHGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  + +  + + R        AA+ LAR      ++ DLIY LP QT+  ++  
Sbjct: 163 RISFGVQDFDPKVQQEIHRIQPYETTKAAVELARKYGIESINTDLIYGLPYQTLESFQNT 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L+ A S   D L+++        L   M K  +  +PS  V + +   T    ++ G
Sbjct: 223 LRLARSLDPDRLAVFNYA-HVPWLKKTMRKFDETTIPSPEVKLQILQYTIDYLTSEG 278


>gi|295101013|emb|CBK98558.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Faecalibacterium prausnitzii L2-6]
          Length = 489

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 104/206 (50%), Gaps = 5/206 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E++ +R       +
Sbjct: 155 GGAPKTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKLVQPYVDCLCREVEAIRDEADKAGL 214

Query: 72  --SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
              SI+ GGGTP+ +    +  ++  +   + +S+ VE T+EA  P   +       R+ 
Sbjct: 215 MLCSIYIGGGTPTSLSAAQLRQLMGTVRDCFDLSTIVEYTVEAGRPDCTDAEKLAVIREY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  ++ L  +GR H+A + I     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDEVLANIGRRHSAQDIIDCYAEARAAGHDDINMDLIAGLPGDTVEGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
           E  L++A++   ++++++ LT+++ +
Sbjct: 335 EKSLRQAIALDPENITVHTLTLKRAS 360


>gi|15596743|ref|NP_250237.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAO1]
 gi|107100976|ref|ZP_01364894.1| hypothetical protein PaerPA_01002006 [Pseudomonas aeruginosa PACS2]
 gi|116049490|ref|YP_791707.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892498|ref|YP_002441365.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa LESB58]
 gi|254239894|ref|ZP_04933216.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa 2192]
 gi|313106551|ref|ZP_07792779.1| oxygen-independent coproporphyrinogen III [Pseudomonas aeruginosa
           39016]
 gi|12230916|sp|P77915|HEMN_PSEAE RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|9947505|gb|AAG04935.1|AE004582_13 oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa PAO1]
 gi|115584711|gb|ABJ10726.1| oxygen-independent coproporphyrinogen III [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126193272|gb|EAZ57335.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa 2192]
 gi|218772724|emb|CAW28509.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa LESB58]
 gi|310879281|gb|EFQ37875.1| oxygen-independent coproporphyrinogen III [Pseudomonas aeruginosa
           39016]
          Length = 460

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 19/290 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +  + L +YVH PFC   C YC  N  + + +     ++   + E++ + R L+  + + 
Sbjct: 49  KAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLSREQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ + P  +  ++  +    N     + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLIYGLPKQTPDSFAR 228

Query: 190 ELQRALSYAVDHLSLYQLT--IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH- 246
            +   ++   D LS++      E+     +++ D DL  P + + + L   T+ + +A  
Sbjct: 229 TVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEM-LQRTTEQLAAAGY 286

Query: 247 ---GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
              G+  + + +     A+    L      Y  +G  D +G+G  A S++
Sbjct: 287 RYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAISQI 336


>gi|319953467|ref|YP_004164734.1| oxygen-independent coproporphyrinogen iii oxidase [Cellulophaga
           algicola DSM 14237]
 gi|319422127|gb|ADV49236.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           algicola DSM 14237]
          Length = 453

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S  + +Y+H PFC   C +C  +  + +    +  ++Q+ L E Q    L   +  I  +
Sbjct: 48  SEGISLYIHLPFCESMCTFCGCHKRITKRHEVEVPYLQTVLKEWQLYCNLFSEKPKIKEL 107

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+    +N+  ++ GI K    ++N E + E +P++    + Q     G  R+S
Sbjct: 108 HLGGGTPTFFSAENLEYLIKGIFKIADKAANYEFSFEGHPNNTTREHLQALYNVGFRRVS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   E+  + + R             AR+I +  +  D+I+ LP QT+   E  + +
Sbjct: 168 FGVQDYNEKVQKAIHREQPFINVKNVTDAARDIGYTSIGHDIIFGLPHQTIADVEQTILK 227

Query: 194 ALSYAVDHLSLY 205
                 D L+ Y
Sbjct: 228 TKELMPDRLAFY 239


>gi|295838480|ref|ZP_06825413.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB74]
 gi|295827013|gb|EFG65183.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB74]
          Length = 438

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 7/212 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISS 73
           N+L +Y+H PFC  +C +C+  + V   +     ++ +   + + +R   G   P   ++
Sbjct: 36  NALSLYLHIPFCEVRCGFCNLFTRVGAPEGLTTAYLDALERQARAVRAALGGAEPVRYAT 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVN 131
             FGGGTP+ +    +  + D IA++   +    + +++E +P++   +        G  
Sbjct: 96  AAFGGGTPTFLTAAELERLCD-IAEHRMGARLGAIPLSVETSPATATPDRLAVLAARGTT 154

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQS +E   R   R    ++  AA+  AR   FP ++ DLIY +  QT   W   
Sbjct: 155 RLSIGVQSFDEAEARAAVRPQRRADVEAALGHARAAGFPVLNIDLIYGIDGQTEASWLRS 214

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           L  AL++  + L LY L +   T   +   +G
Sbjct: 215 LDAALAWRPEELYLYPLYVRPLTGLGRRASEG 246


>gi|87119916|ref|ZP_01075812.1| coproporphyrinogen III oxidase [Marinomonas sp. MED121]
 gi|86164618|gb|EAQ65887.1| coproporphyrinogen III oxidase [Marinomonas sp. MED121]
          Length = 455

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 102/200 (51%), Gaps = 6/200 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMR-QLTGP 68
           M    +  L +Y H P+C K C YC  N  +   YK G E +++  + E++     ++  
Sbjct: 40  MLMPSNKPLSLYFHIPYCAKLCYYCACNKVISSNYKKGDE-YLELLIEEIRLKSLMISED 98

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYR 126
           R +  + FGGGTP+ +     + +++ + +N+ +  N E   +IE +P  ++ +  +G R
Sbjct: 99  REVRQLHFGGGTPTFLSLSAFSKLMNYLKQNFNMLDNDEGEYSIEVDPREIDQDKLEGLR 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           + G NR+S G+Q   ++    + R  +     + +  +R + +  ++FDLIY LP QT  
Sbjct: 159 ELGFNRLSFGIQDFNKRVQTTINRVQSYELIKSLMIKSRELRYQSINFDLIYGLPYQTQE 218

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +   L + +  + D +S++
Sbjct: 219 GFTKTLNQVIELSPDRISVF 238


>gi|182624384|ref|ZP_02952168.1| putative ferrochelatase [Clostridium perfringens D str. JGS1721]
 gi|177910387|gb|EDT72764.1| putative ferrochelatase [Clostridium perfringens D str. JGS1721]
          Length = 480

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 127/254 (50%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDIEPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++     +       D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCKMIKDLNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|91228745|ref|ZP_01262656.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
 gi|91187691|gb|EAS74012.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
          Length = 478

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 4/218 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           + +N   +Y+H PFC  +C +C+F  +     +  E F ++ + E++    L   ++   
Sbjct: 80  KATNKRCLYIHVPFCRVRCTFCNFFQNAASRTLVDEYF-EALMQELREKAALPWTQNGIF 138

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ ++++ EIT+E   +      +QG    G N
Sbjct: 139 HAVYIGGGTPTDLSPIQVRVLGQAIRDHFPLAADCEITLEGRINRFSDELYQGALDGGFN 198

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS   Q  R   R  +  + +  +  +A+     +  DL+Y LP QT    E +
Sbjct: 199 RFSFGVQSFNTQVRRSAKRLDDREDVLKRVSEIAKEDKIPVIIDLLYGLPYQTKEVLEQD 258

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           L   LS     L LYQL +        + + G +  P+
Sbjct: 259 LNDFLSTGAHGLDLYQLVVGGSAPMLNLVEKGKIPPPA 296


>gi|307566384|ref|ZP_07628823.1| coproporphyrinogen dehydrogenase [Prevotella amnii CRIS 21A-A]
 gi|307344961|gb|EFN90359.1| coproporphyrinogen dehydrogenase [Prevotella amnii CRIS 21A-A]
          Length = 454

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 1/192 (0%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
           G+++L  Y H PFC + C YC  NS+  + +   + ++++   E+  + + L   R IS 
Sbjct: 44  GTSNLSFYFHIPFCYRLCHYCGCNSYPMQKQENVKAYVEAIHKEIDIVAKHLNKKRCISQ 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I +GGG+P+ +    +    + +   +    + EI IE +P  +E N++     A  NR 
Sbjct: 104 IHYGGGSPTSLPVTVLKEFNEHLFSYFPTIEHPEIAIECHPGYLEKNDWYKLLSAHFNRF 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+GVQ   E  L+ + R  +    +  I++ R     ++ D ++ LP QT   +   +++
Sbjct: 164 SIGVQDFNEDVLKVVNRTPSKLPLLDIIYILREGGASINMDFLFGLPLQTPDSFLQTMRK 223

Query: 194 ALSYAVDHLSLY 205
           A++   D L+ +
Sbjct: 224 AITLKPDRLTTF 235


>gi|308048714|ref|YP_003912280.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
 gi|307630904|gb|ADN75206.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
          Length = 449

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
            GQ  ++  +YVH PFC  +C YC+F     +Y   Q    Q F    + +R +   P S
Sbjct: 53  AGQPGDTRCLYVHIPFCRVRCSYCNFF----QYASSQSLIDQYFDALCREIRHKAAQPWS 108

Query: 71  ----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                 +++ GGGTP+ +    +  +   + +++ ++ + EIT+E   +  +   F+   
Sbjct: 109 QAAPFQAVYIGGGTPTDLSATQLQQLGQMLRQHFPLAPDCEITLEGRVNGFDRAKFESAL 168

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTM 184
             G NR S GVQS   Q  R   R  +    +  I   +A N  P +  DL+Y LP Q++
Sbjct: 169 AGGFNRFSFGVQSFNSQVRRAARRLDDGDVVMRRIQEIVAYNSAP-IVIDLLYGLPHQSL 227

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             W+ +L   L      + LYQL   +G   ++  + G L  P++  
Sbjct: 228 EVWQQDLADYLESGAHGVDLYQLIDMQGLPMHRQVEQGKLPPPADTA 274


>gi|294789262|ref|ZP_06754500.1| oxygen-independent coproporphyrinogen III oxidase [Simonsiella
           muelleri ATCC 29453]
 gi|294482687|gb|EFG30376.1| oxygen-independent coproporphyrinogen III oxidase [Simonsiella
           muelleri ATCC 29453]
          Length = 468

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 3/201 (1%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTG 67
           +N+       + +Y+H PFC   C YC  N  + +     + ++     EM  ++  L G
Sbjct: 54  DNVLNANEKPVSLYIHIPFCNVICYYCGCNKVITKDTSKADEYLNYLEKEMALLKPHLHG 113

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              ++ + FGGGTP+ +  + +  +   I +++ +  N E +IE +P  V   +     K
Sbjct: 114 KHQLAQLHFGGGTPTFLSDEQLERVFKMIREHFELLPNGEYSIEIDPRKVSRESVFKLAK 173

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G NR+S+G+Q  + +    + R     E    I  AR   F  +S DLIY LP Q++  
Sbjct: 174 LGFNRMSVGIQDFDPKVQAAVNRIQTIEETQNVIEAAREAGFKSISVDLIYGLPHQSVQS 233

Query: 187 WEMELQRALS-YAVDHLSLYQ 206
            +  L   L+    D ++LY 
Sbjct: 234 IKPTLDTVLTALNPDRIALYH 254


>gi|325499418|gb|EGC97277.1| coproporphyrinogen III oxidase [Escherichia fergusonii ECD227]
          Length = 412

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 3/188 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  +         +N+I++ + + + M+    P   +S   GGGT
Sbjct: 42  LYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIIQARQMQ--LAPVDWASFTIGGGT 99

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    ++ +  G+     V + +   IE +PS           +  VNR+S+G+QS 
Sbjct: 100 PLLLNTGQLSRLFRGVFDELQVDAQIFKAIETSPSDTTAEKVALLCQLAVNRVSIGIQSF 159

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R H+A  A  A+ L R   FP ++ D+IY +P QT       L +AL Y  
Sbjct: 160 NDLELATLHRRHSAENAHRALELLRRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQP 219

Query: 200 DHLSLYQL 207
           D L LY L
Sbjct: 220 DELFLYPL 227


>gi|325292990|ref|YP_004278854.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
 gi|325060843|gb|ADY64534.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
          Length = 449

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 107/193 (55%), Gaps = 6/193 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           N + +Y+H P+C + C +C  ++ H  +Y+     ++++   E+  +  L  P ++ S++
Sbjct: 45  NRISLYLHIPYCDRLCWFCACHTKHTLKYEP-IAVYLEALKREIAAVGSLVSPDAVVSAV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+++ P+++  ++D + +++T     EI++E +P+ ++ + +      G+ R S
Sbjct: 104 HFGGGSPTMLRPEDMVGLMDCLKRHFTFGLAPEISVEMDPNDLDESRYDALAAIGMTRAS 163

Query: 135 LGVQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           LGVQ  +++  + + R      +E++     AR +   ++ D++Y LP QT    +  + 
Sbjct: 164 LGVQDFDDKVQKTINRIQTFEQTESVVDAVRARGVH-SVNCDILYGLPFQTCETLQQTVD 222

Query: 193 RALSYAVDHLSLY 205
           + +S   D ++L+
Sbjct: 223 QIISLDPDRIALF 235


>gi|88801174|ref|ZP_01116717.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
 gi|88776077|gb|EAR07309.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
          Length = 463

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 4/194 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH PFC   C YC  N    + K   + ++ +   EM    +  G R ++ + 
Sbjct: 54  TTPLSLYVHIPFCQHICFYCACNKIATKDKTRADAYLDTLEREMALHARNFGHRKVTQLH 113

Query: 76  FGGGTPSLIEPQNIALILD--GIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNR 132
            GGGTP+ +    ++ +LD   I  +W  +  + E +IE +P     +  +  R  G NR
Sbjct: 114 LGGGTPTFLTLPQMSRMLDMLSIYFDWDPAQHDGEYSIELDPRETTDDMLRLLRTRGFNR 173

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S GVQ  + Q+   + R          + LAR + F  ++FDLI  LP Q    +    
Sbjct: 174 VSFGVQDFDPQTQIAINRVQPFELVKDKVDLARELGFSSVNFDLICGLPHQNTRSFSQTW 233

Query: 192 QRALSYAVDHLSLY 205
            + L+   D +SLY
Sbjct: 234 DQTLTLEPDRISLY 247


>gi|325274397|ref|ZP_08140486.1| coproporphyrinogen III oxidase [Pseudomonas sp. TJI-51]
 gi|324100469|gb|EGB98226.1| coproporphyrinogen III oxidase [Pseudomonas sp. TJI-51]
          Length = 460

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  +  + FG
Sbjct: 54  LSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLIACHLAPKQRVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHVELRQLMTTLRQHFHLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSINLDLIYGLPKQTPQGFARTVEEV 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IRLQPDRLSVF 244


>gi|188579703|ref|YP_001923148.1| coproporphyrinogen III oxidase [Methylobacterium populi BJ001]
 gi|179343201|gb|ACB78613.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           populi BJ001]
          Length = 450

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIF 75
            +  +Y+H PFC   C YC  ++H+ R+    ++++ S   E+  +   L    ++  + 
Sbjct: 46  TTASLYLHVPFCRSLCWYCGCHTHITRHDAPIDDYLASLRKEIGLVAGHLERRPAVRHVH 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P     ++  +  ++  +   EI +E +P ++     +   +AGV R SL
Sbjct: 106 FGGGTPTIMAPAAFRELMALLRAHFPFAPEAEIAVEIDPRTLAPAMIRALGEAGVTRASL 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +      + R  + +   AA+   R     R++ DLIY LP Q++      +++ 
Sbjct: 166 GVQSFDPAVQAAIRRRQDYAVTEAAVAGLRAAGIRRINLDLIYGLPHQSVESCVETVRQC 225

Query: 195 LSYAVDHLSLY 205
           L+   D L+++
Sbjct: 226 LALRPDRLAVF 236


>gi|251773101|gb|EES53655.1| oxygen-independent coproporphyrinogen III oxidase [Leptospirillum
           ferrodiazotrophum]
          Length = 458

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 6/201 (2%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E+N  G   + L +Y H PFC   C +C  ++ + R K   E +      E+  +  +  
Sbjct: 44  ESNRRG---DPLSLYFHIPFCESLCYFCGCSTIITRDKSRAEEYNDYLARELGILSSVLD 100

Query: 68  P-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGY 125
           P R +  +  GGGTPS + P     + + I KN+ V     EI++E +P        +  
Sbjct: 101 PKRRVIQLHLGGGTPSSLTPFQTRRLFESINKNFDVDYREGEISVEIDPRFASDAYLETL 160

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  GVNRIS+GVQ  + +    + R       +      R++ F  ++ DLIY LP QT+
Sbjct: 161 RTVGVNRISMGVQDFDPKVQEAVHRVQPEEVTVRVAKKVRDLGFHSLNIDLIYGLPFQTV 220

Query: 185 TQWEMELQRALSYAVDHLSLY 205
             +   L + +  + D ++++
Sbjct: 221 ESFSRTLDKVIEISPDRIAVF 241


>gi|237741740|ref|ZP_04572221.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256845068|ref|ZP_05550526.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|294785646|ref|ZP_06750934.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|229429388|gb|EEO39600.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256718627|gb|EEU32182.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|294487360|gb|EFG34722.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 411

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 120/272 (44%), Gaps = 10/272 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFF 76
           LG+Y H P+C K C +C+ N   ++     E + +    E++     +      I  +FF
Sbjct: 43  LGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYEFCKTSEIDVVFF 100

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + GVNRIS+G
Sbjct: 101 GGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENGVNRISVG 160

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           +Q+   +  + L R ++    +  +   +  F  +   D+IY    QT  +   +     
Sbjct: 161 IQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTDEEVLQDADLLA 220

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD--LYNLTQSITSAHGLHAYEI 253
               D  S Y L I  G+   K  ++ D  +   N+A D  L+NL  +    +G    E+
Sbjct: 221 EVGADSASFYSLMIHDGSNISK-EREKDKSVYIYNLARDEKLHNLFYNRCIENGYKLLEL 279

Query: 254 S--NHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           +   +     + + N N  R    IG G G H
Sbjct: 280 TKITNGRDAYKYIRNNNGLRNLLPIGAGAGGH 311


>gi|170722745|ref|YP_001750433.1| coproporphyrinogen III oxidase [Pseudomonas putida W619]
 gi|169760748|gb|ACA74064.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida W619]
          Length = 460

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 15/283 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L VYVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  +  +  G
Sbjct: 54  LSVYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLIACHLDPKQRVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHVELRQLMATLRQHFNLLDDDSGDYGIELDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLIYGLPKQTPEGFARTVEEV 233

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHA 250
           +    D LS++    + +  +  +     DL  P+  + +    + Q  T+ +   G+  
Sbjct: 234 IRLQPDRLSVFNYAHLPERFMPQRRIDSNDLPAPAAKLEMLRATIEQLTTAGYRYIGMDH 293

Query: 251 YEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
           + + +     A+    L      Y  +G  D IG+G  A S++
Sbjct: 294 FALPDDELAVAQEEGTLQRNFQGYTTHGHCDLIGLGVSAISQI 336


>gi|299530175|ref|ZP_07043601.1| coproporphyrinogen III oxidase [Comamonas testosteroni S44]
 gi|298721832|gb|EFI62763.1| coproporphyrinogen III oxidase [Comamonas testosteroni S44]
          Length = 460

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 3   YLSAYENNMTGQGSNSL--GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+ A +   T  GS +L   VYVH PFC   C YC  N  V ++      ++     E+ 
Sbjct: 37  YILALKQRKTHSGSRALPLSVYVHVPFCESLCYYCACNKIVTKHHEKAAEYLDYLSRELA 96

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              +  G  + +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V  
Sbjct: 97  MHTEHCGKGQLVSQLHLGGGTPTFFSDAELQQLMVLMREHFKLDPAGEYSIEVDPRTVSN 156

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +  +  G NR+S GVQ  +    + + R   A +  + +  AR + F  ++ DLIY 
Sbjct: 157 ERLRALKDMGFNRLSFGVQDFDPAVQKAVHREQPAEQVFSLVAEARRLGFVSINVDLIYG 216

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP+QT   +   L +      D ++LY
Sbjct: 217 LPRQTPESFARTLAQVNELRPDRIALY 243


>gi|296390084|ref|ZP_06879559.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAb1]
          Length = 318

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +  + L +YVH PFC   C YC  N  + + +     ++   + E++ + R L+  + + 
Sbjct: 49  KAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLSREQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ + P  +  ++  +    N     + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLIY LPKQT   +  
Sbjct: 169 NRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLIYGLPKQTPDSFAR 228

Query: 190 ELQRALSYAVDHLSLY 205
            +   ++   D LS++
Sbjct: 229 TVDEVIALQPDRLSVF 244


>gi|282860335|ref|ZP_06269404.1| coproporphyrinogen dehydrogenase [Prevotella bivia JCVIHMP010]
 gi|282586932|gb|EFB92168.1| coproporphyrinogen dehydrogenase [Prevotella bivia JCVIHMP010]
          Length = 454

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 95/191 (49%), Gaps = 1/191 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           +++L  Y H PFC + C YC  NS+  + + G + ++ +   E+  + Q L   R IS I
Sbjct: 45  TSNLSFYFHIPFCRRLCHYCGCNSYPMQKEEGVQTYVDALHKEIDLVVQHLNKSRRISQI 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGG+P+ +    +  + + +  ++      EI IE +P  +E  +++    A  NR S
Sbjct: 105 HYGGGSPTSLPASVLQELNEHLLTSFPTIEQPEIAIECHPGYLEKKDWENLLAAHFNRFS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQ L+ + L+ + R  +       + + R     ++ D ++ LP QT   ++  + +A
Sbjct: 165 IGVQDLDTEVLKIVNRTPSKLPLTVIMQILREGGASINMDFLFGLPHQTPESFQNTIHKA 224

Query: 195 LSYAVDHLSLY 205
           +    D L+ +
Sbjct: 225 IELYPDRLTTF 235


>gi|167570927|ref|ZP_02363801.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis C6786]
          Length = 464

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 5/230 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 SQLHWGGGTPTFLSDAETTELMAATREYFTLASDRAGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDRDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
             L   +    D LS++        LF    +  D  LP     + L  L
Sbjct: 232 RTLDTIVELEPDRLSVFGYA-HMPHLFKMQRQIDDAALPPPATRIALLGL 280


>gi|16263144|ref|NP_435937.1| coproporphyrinogen III oxidase [Sinorhizobium meliloti 1021]
 gi|307305136|ref|ZP_07584885.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
 gi|14523808|gb|AAK65349.1| HemN coproporphyrinogen III oxidase [Sinorhizobium meliloti 1021]
 gi|46403701|gb|AAS92907.1| hypothetical protein [Sinorhizobium meliloti]
 gi|306902476|gb|EFN33071.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
          Length = 450

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ + +      +++     E+  +   T  P SI  + FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITQRDQPILDYLDMLREEVHLVSAKTRAPLSIDHVHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++++P+    ++  + + +  +S  EI +E +P ++E +      +AGV R SLGVQS
Sbjct: 110 TPTIMQPEEFRALVALLRERFEFASMTEIAVEIDPRTLEPDMATALGEAGVRRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +    + + R  +  + + A+  L ++    ++FDLIY LP QT+       + A+   
Sbjct: 170 FDPVVQKAINRIQSEEQTMEAVSRLRQSGVDSINFDLIYGLPHQTVESCIATAEAAIRMG 229

Query: 199 VDHLSLY 205
            +  +++
Sbjct: 230 PERFAVF 236


>gi|146329030|ref|YP_001209018.1| oxygen-independent coproporphyrinogen III oxidase [Dichelobacter
           nodosus VCS1703A]
 gi|146232500|gb|ABQ13478.1| oxygen-independent coproporphyrinogen III oxidase [Dichelobacter
           nodosus VCS1703A]
          Length = 458

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 4/198 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q    L +Y+H PFC   C YC  N  + + +     ++     +++     +   R 
Sbjct: 45  SNQHKKDLSLYIHIPFCTHVCYYCACNKIITQKREHAAAYLDYLRRDIERQSAHIDASRK 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ + P+  + ++  +  ++T +S    E++IE +P +V+       R+ 
Sbjct: 105 VVQLHLGGGTPTFLTPEQQSDLMAFLYDHFTFASAEESELSIEIDPRTVDKAYLAHLRQL 164

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S G+Q  +E   + + R     E    ++ AR + +  +S DLIY LP QT  ++
Sbjct: 165 GFNRLSFGIQDTQEAVQKVVNRVQPLEEIAQLMNEARALAYQSLSVDLIYGLPLQTPARF 224

Query: 188 EMELQRALSYAVDHLSLY 205
              L+  +    D L++Y
Sbjct: 225 AKTLEDVVRLNPDRLAVY 242


>gi|300118692|ref|ZP_07056420.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
 gi|298723941|gb|EFI64655.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
          Length = 200

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  +++    E+    Q     S+ +IF GG
Sbjct: 3   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLEYLEKEIINTVQKVPFDSMKTIFVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +LD I +     + N E+T EANP  +         + GVNRIS GV
Sbjct: 61  GTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           Q+  ++ L  +GR H   +A  AI  A+ +
Sbjct: 121 QTFRDELLEKIGRKHTREDAFVAIREAQEV 150


>gi|161501789|ref|YP_765320.2| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 450

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 2/171 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           +  + VY+H P+C   C YC  ++ + R       ++     E++ +    G   ++ ++
Sbjct: 45  AGPVSVYLHVPYCRSMCWYCGCHTSITRQDGPVREYLDVMSQEIELVSFAAGNEVAVRNV 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++ PQ  A I+  +   +   ++  I +E +P ++ V   +   ++GV+R S
Sbjct: 105 HFGGGTPTIMRPQEFAAIISKLRSAFRFEADASIAVEIDPRTLAVPMIEALGESGVDRAS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           LGVQS +      + R  +  +   A+   R++    ++FDLIY LPKQT+
Sbjct: 165 LGVQSFDPIVQATINRMQSFEQTEIAVSGLRSMGISSINFDLIYGLPKQTV 215


>gi|317128167|ref|YP_004094449.1| coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
           2522]
 gi|315473115|gb|ADU29718.1| Coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
           2522]
          Length = 499

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 11/209 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------RS 70
           N + +Y+  PFC   C YC F ++      G+   ++ FLT + +  ++TG         
Sbjct: 173 NEVSIYIGIPFCPTMCAYCTFPAYAIN---GKNGSVEEFLTGLHYEMEVTGTWLKERNIK 229

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           +++I++GGGTP+ I  + +  + + + + + ++   E+T+EA  P ++     +  +K  
Sbjct: 230 VTTIYYGGGTPTSITAREMDALYEKMYQVFPMADVRELTVEAGRPDTISPEKIEVLKKWN 289

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V+RIS+  QS   ++L+ +GR+H+  E I    L+  +    ++ DLI  LP + + +  
Sbjct: 290 VDRISVNPQSFTNETLKAIGRHHSVEETIDKYKLSMEMGMTNINMDLIIGLPGEGVEELS 349

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             LQ         L+++ L+ ++ +   K
Sbjct: 350 HTLQVTSELKPASLTVHTLSYKRASQMTK 378


>gi|89255377|ref|NP_659778.2| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|89213331|gb|AAM54792.2| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 464

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 7   YENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQ 64
           YE  +  QG++ ++ +Y+H PFC   C YC F + + R      +++     E++ +  Q
Sbjct: 55  YEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVAEQ 114

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  + 
Sbjct: 115 VPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEA 174

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
             + GVNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP QT
Sbjct: 175 LERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQT 234

Query: 184 MTQWEMELQRALSYAVDHLSLY 205
           +         A++   D L+++
Sbjct: 235 VQSCLESAMLAIAMRPDRLAVF 256


>gi|329113785|ref|ZP_08242556.1| Oxygen-independent coproporphyrinogen-III oxidase [Acetobacter
           pomorum DM001]
 gi|326696795|gb|EGE48465.1| Oxygen-independent coproporphyrinogen-III oxidase [Acetobacter
           pomorum DM001]
          Length = 461

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +  + +Y H PFC + C +C  N+ V R++ G+  +      EM+ +  L G  R++  +
Sbjct: 48  NEPVSLYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRIVALVGEQRTVKHV 107

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+ + P  +  I+  I   +      E+ +E +P  V  +        G  RIS
Sbjct: 108 QFGGGTPTTLPPHALRQIIRSIRTFFQFDPQAELAMELDPRHVPQDYPALLGDLGFTRIS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ LE +     GR+ +  +  A+I  AR      ++ DLIY LP QT+        +
Sbjct: 168 LGVQDLEPRVQEACGRHQSFEQTQASIQAARAAGVSGVNIDLIYGLPYQTVESVGATALK 227

Query: 194 ALSYAVDHLSLY 205
             S   D L+++
Sbjct: 228 IASLRPDRLAVF 239


>gi|124267656|ref|YP_001021660.1| coproporphyrinogen III oxidase [Methylibium petroleiphilum PM1]
 gi|124260431|gb|ABM95425.1| coproporphyrinogen III oxidase, anaerobic [Methylibium
           petroleiphilum PM1]
          Length = 476

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
             L +YVH PFC   C YC  N  + R+++ G E +++    E+   + + G R  +S +
Sbjct: 69  TPLSIYVHIPFCESVCYYCACNKVITRQHRRGTE-YLEWLGREVALHQDVIGSRQRVSQL 127

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ ++   ++ ++  +   + +    E +IE +P +V  +     +  G NR+S
Sbjct: 128 HLGGGTPTFLDDTELSQLMALLRGAFDLQPQAECSIEVDPRTVSASRLAHLKALGFNRLS 187

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R   A +  A I  AR + F  ++ DLI+ LPKQT       +++
Sbjct: 188 FGVQDFDPEVQHAVHRVQPAEQVEALIASARALGFDSINVDLIHGLPKQTPASLARTVEQ 247

Query: 194 ALSYAVDHLSLY 205
                 D ++LY
Sbjct: 248 VARLRPDRVALY 259


>gi|57237817|ref|YP_179065.1| coproporphyrinogen III oxidase [Campylobacter jejuni RM1221]
 gi|57166621|gb|AAW35400.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni RM1221]
          Length = 451

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+     + QN+ L +  +  N+  S +VEI+ E +P  +         + G NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDVEISCEIDPRFLNEEQATVLTQNGFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++L RN     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|54309282|ref|YP_130302.1| coproporphyrinogen III oxidase [Photobacterium profundum SS9]
 gi|46913714|emb|CAG20500.1| putative coproporphyrinogen III oxidase [Photobacterium profundum
           SS9]
          Length = 483

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 2/212 (0%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGG 79
           +YVH PFC  +C YC+F  +     +  + F    +  E++  +  T      +++ GGG
Sbjct: 82  LYVHIPFCRVRCTYCNFFQYASSQSLIDDYFAALMVELELKARQAWTQAAPFHAVYIGGG 141

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    I  +   I +++ ++++ E+T+E   +      F    + G NR S GVQS
Sbjct: 142 TPTDLTAAQIKRLGQMIRQHFPLTTDCELTLEGRINRFTDEMFDSALEGGFNRFSFGVQS 201

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + Q  R   R  +    +  I  L+ +    +  DL+Y LP Q +T W+ +L   L   
Sbjct: 202 FDTQVRRKAKRLDDKDVVLERIQALSSSESAPIVIDLLYGLPYQDLTVWQQDLNDFLDSG 261

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              + LYQL    GT    + ++G L  P++ 
Sbjct: 262 AHGVDLYQLIEMGGTPMKGLVENGRLPEPADT 293


>gi|330808469|ref|YP_004352931.1| coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327376577|gb|AEA67927.1| Coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 460

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 17/284 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + + +     ++Q    E+Q +   L   + +  + FG
Sbjct: 54  LSLYLHIPFCANICYYCACNKVITKDRGRAHAYLQRLEQEIQLIGCHLDPTQRVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +  N     + +  IE +P   + +     R+ G NR+S+
Sbjct: 114 GGTPTFLSHDELRQLMAKLRQHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSI 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q L+    R + R  +  E  A +  AR + F  ++ DLIY LPKQT   +   +Q  
Sbjct: 174 GLQDLDPAVQRAVNRLQSLEETRAVVEAARTLQFRSINIDLIYGLPKQTPENFARTVQEV 233

Query: 195 LSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH----GLH 249
           +    D LS++    + +  +  +     DL  P + +A+ L    + +T+A     G+ 
Sbjct: 234 IHLQPDRLSVFNYAHLPERFMPQRRINSQDLPTPEQKLAM-LQGTIEQLTAAGYRYVGMD 292

Query: 250 AYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
            + + +     A+    L      Y  +G  D IG+G  A S++
Sbjct: 293 HFALPDDELAIAQEEATLQRNFQGYTTHGHCDLIGLGVSAISQI 336


>gi|115254130|emb|CAK03733.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 456

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 2/171 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           +  + VY+H P+C   C YC  ++ + R       ++     E++ +    G   ++ ++
Sbjct: 51  AGPVSVYLHVPYCRSMCWYCGCHTSITRQDGPVREYLDVMSQEIELVSFAAGNEVAVRNV 110

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++ PQ  A I+  +   +   ++  I +E +P ++ V   +   ++GV+R S
Sbjct: 111 HFGGGTPTIMRPQEFAAIISKLRSAFRFEADASIAVEIDPRTLAVPMIEALGESGVDRAS 170

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           LGVQS +      + R  +  +   A+   R++    ++FDLIY LPKQT+
Sbjct: 171 LGVQSFDPIVQATINRMQSFEQTEIAVSGLRSMGISSINFDLIYGLPKQTV 221


>gi|296273195|ref|YP_003655826.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097369|gb|ADG93319.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
          Length = 455

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 3/195 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
             S +L +Y+H PFC   C +C  N      +  +  +++    E++ + + +   R ++
Sbjct: 43  DSSRNLSLYLHLPFCRSACYFCGCNVIFTSKEDKKVRYLEYVQKELKLLEKYVDTSRKVT 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P+ +  ++  I +++   SS+ EI+ E +P      +    +K G N
Sbjct: 103 QMHFGGGTPTYFSPEQLDEVISMIKRSFPNFSSDAEISCEVDPRYFTKEHMDVLKKGGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ L+E+  + + R          +++AR      ++ DLIY LP Q    +   
Sbjct: 163 RLSFGVQDLDEEVQKTIHRIQPYETTQNVMNIAREAGIKSINIDLIYGLPHQNRETFNET 222

Query: 191 LQRALSYAVDHLSLY 205
           L + L    D  +++
Sbjct: 223 LHKILELDADRFAVF 237


>gi|221201136|ref|ZP_03574176.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2M]
 gi|221206411|ref|ZP_03579424.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2]
 gi|221173720|gb|EEE06154.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2]
 gi|221178986|gb|EEE11393.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2M]
          Length = 463

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 13/243 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP---- 68
           G  S+ L +Y H PFC   C YC  N    R         + +L +++    L       
Sbjct: 51  GASSSELSLYFHIPFCNTACFYCGCN----RIATNNHRRARPYLDQLKREIALQATLFDR 106

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGY 125
            R ++ + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V  +     
Sbjct: 107 SRPVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVTPSTLVHL 166

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+SLGVQ  +    R + R    +     +  AR   F  +S DLIY LP QT+
Sbjct: 167 RTIGFNRLSLGVQDFDPDVQRAINRIQPLAMTADVMAAARATDFHSISVDLIYGLPHQTV 226

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+  +  A D LS++        LF    +  D  LP     + L  L   + +
Sbjct: 227 AAFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRRIDDATLPPAETRIALLGLAIDMLT 285

Query: 245 AHG 247
           + G
Sbjct: 286 SAG 288


>gi|254229075|ref|ZP_04922495.1| coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262396651|ref|YP_003288504.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
 gi|151938366|gb|EDN57204.1| coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262340245|gb|ACY54039.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
          Length = 456

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 6/270 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           + +N   +Y+H PFC  +C +C+F  +     +  E F  + + E++    L   ++   
Sbjct: 58  KATNKRCLYIHVPFCRVRCTFCNFFQNAASRALVDEYF-DALMQELKEKAALPWTQNGIF 116

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ ++++ EIT+E   +      +QG    G N
Sbjct: 117 HAVYIGGGTPTDLSPAQVRVLGQAIHDHFPLAADCEITLEGRINRFSDELYQGALDGGFN 176

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS   Q  R   R  +  + +  +  +A      +  DL+Y LP QT    E +
Sbjct: 177 RFSFGVQSFNTQVRRSAKRLDDREDVLRRVSEIANEDKIPVIIDLLYGLPYQTKEVLEQD 236

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLH 249
           L   LS     L LYQL +        + + G +  P+       +Y L  +  + H + 
Sbjct: 237 LNDFLSTGAHGLDLYQLVVGGSAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMK 296

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGI 278
              +++ +    E SL+N     Y + + I
Sbjct: 297 QLSVNHWAIDNRERSLYNSLAKTYAEVLPI 326


>gi|300778701|ref|ZP_07088559.1| possible coproporphyrinogen dehydrogenase [Chryseobacterium gleum
           ATCC 35910]
 gi|300504211|gb|EFK35351.1| possible coproporphyrinogen dehydrogenase [Chryseobacterium gleum
           ATCC 35910]
          Length = 452

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 5/204 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + +++ +  G+G   + +Y+H PFC   C +C  +  + +    +  +++S L E +   
Sbjct: 39  IRSFDESNAGEG---ISIYIHLPFCEALCTFCACHKRITKQHSVEVPYLESVLKEWKLYL 95

Query: 64  QLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            L   R  +  +  GGGTP+   P+N+  +L+GI     ++ + E + E +P++    + 
Sbjct: 96  DLFSERPKLKELHLGGGTPTFFSPENLRTLLEGIFSTVDIAEHPEFSFEGHPNNTTKEHL 155

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPK 181
           Q     G  R+S GVQ  + +  + + R             A+ I  R +S DL++ LP 
Sbjct: 156 QTLYDLGFRRVSFGVQDYDPKVQKAINRIQPFENVKNVTEWAKEIGYRGISHDLVFGLPH 215

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           Q     E  +++ +    D L+ Y
Sbjct: 216 QNWEAMEYTIRKTMELKPDRLAFY 239


>gi|218514269|ref|ZP_03511109.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 409

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 7   YENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQ 64
           YE  +  QG++ ++ +Y+H PFC   C YC F + + R      +++     E++ +  Q
Sbjct: 28  YEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVAEQ 87

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  + 
Sbjct: 88  VPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEA 147

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
             + GVNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP QT
Sbjct: 148 LERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQT 207

Query: 184 MTQWEMELQRALSYAVDHLSLY 205
           +         A++   D L+++
Sbjct: 208 VQSCLESAMLAIAMRPDRLAVF 229


>gi|159898365|ref|YP_001544612.1| coproporphyrinogen III oxidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891404|gb|ABX04484.1| Coproporphyrinogen dehydrogenase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 439

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 4/203 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +  + L +Y+H PFC  +C +C+  +     +   + ++ +   +MQ +    G    S 
Sbjct: 40  EAHDQLFLYLHIPFCEMRCGFCNLFTTTNPNESVVQRYLATLELQMQALHNELGAVQFSR 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +  GGGTP+ +    +  +   +++ W    S  + +++E +P +   +      +AGV+
Sbjct: 100 MAIGGGTPTYLSASELEQLFS-MSQRWLGVNSRAIPLSVETSPHTATADRMAILAQAGVD 158

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQS  +      GR     E   A+   R    P ++ DLIY LP Q++  W   
Sbjct: 159 RVSIGVQSFLDHEAHAAGRAQRRPEVEQALATVRAAQIPTLNIDLIYGLPNQSVATWLES 218

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
           L+  L +  + L LY L +   T
Sbjct: 219 LEIGLQWRPEELYLYPLYVRPLT 241


>gi|325679300|ref|ZP_08158885.1| coproporphyrinogen dehydrogenase HemZ [Ruminococcus albus 8]
 gi|324108897|gb|EGC03128.1| coproporphyrinogen dehydrogenase HemZ [Ruminococcus albus 8]
          Length = 492

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 103/205 (50%), Gaps = 9/205 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR--SIS 72
           S  +YV  PFC  +C YC F S       G++    +I     E++    +T      + 
Sbjct: 168 SFSLYVSIPFCPTRCSYCSFISQT--LDSGRKLIPEYIDKMCREIRHTALITKRLGLKLE 225

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVN 131
           +++FGGGTP+ IE + +  ++  I   + +S   E T+EA  P ++     +  ++ G  
Sbjct: 226 TVYFGGGTPTSIEAEQLGALMKCIEHCFDMSGVKEYTVEAGRPDTITEAKLRTIKENGCT 285

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QSL    L  +GR+H+  +   +  LAR I F  ++ D+I  LP  T+  ++  
Sbjct: 286 RISINPQSLNPAVLEAIGRSHSVEQFYNSFELARKIGFSCINTDVIAGLPNDTVESFDDT 345

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLF 215
           + + +  + ++ +++ L+I++  + 
Sbjct: 346 IDKLIELSPENYTVHTLSIKRAAVL 370


>gi|110802256|ref|YP_699211.1| coproporphyrinogen III oxidase [Clostridium perfringens SM101]
 gi|110682757|gb|ABG86127.1| putative ferrochelatase [Clostridium perfringens SM101]
          Length = 480

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKELNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|110801228|ref|YP_696614.1| coproporphyrinogen III oxidase [Clostridium perfringens ATCC 13124]
 gi|110675875|gb|ABG84862.1| putative ferrochelatase [Clostridium perfringens ATCC 13124]
          Length = 480

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 127/254 (50%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDIEPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  ++  +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEHFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKDLNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|93007273|ref|YP_581710.1| coproporphyrinogen III oxidase [Psychrobacter cryohalolentis K5]
 gi|92394951|gb|ABE76226.1| oxygen-independent coproporphyrinogen III oxidase [Psychrobacter
           cryohalolentis K5]
          Length = 514

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 11/237 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------IS 72
           L +Y H PFC   C YC  N  + +      +++   + E++  R L  P        + 
Sbjct: 94  LSLYFHIPFCRHLCYYCACNKIITKKNSDAGDYLAYLIAEIKHKRGLLTPPEDGKKPLVK 153

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ ++   +  + + +   +        + +IE +P  +     +  R  G 
Sbjct: 154 QLHFGGGTPTFLQDNELIQLWEFLQTQFEFLPEDQGDYSIEIDPRELSSETLKVLRTLGF 213

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+E     + R H+A      ++ AR + F  ++ DLIY LP QT   ++ 
Sbjct: 214 NRVSLGVQDLDETVQIAVNRVHSAELIENVLNEARELGFHSINVDLIYGLPHQTPETFDK 273

Query: 190 ELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++R +  + D LS++    + +     +  K+ DL  PS+   + L N   ++T A
Sbjct: 274 TIRRIIEMSPDRLSVFNYAHLPERFKAQRQIKEDDLPTPSDKFTM-LGNTINTLTEA 329


>gi|169343740|ref|ZP_02864739.1| putative ferrochelatase [Clostridium perfringens C str. JGS1495]
 gi|169298300|gb|EDS80390.1| putative ferrochelatase [Clostridium perfringens C str. JGS1495]
          Length = 480

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKELNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|17230618|ref|NP_487166.1| coproporphyrinogen III oxidase [Nostoc sp. PCC 7120]
 gi|17132221|dbj|BAB74825.1| oxygen independent coprophorphyrinogen III oxidase [Nostoc sp. PCC
           7120]
          Length = 460

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 6/195 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           + + +Y H PFC   C +C  N+ +   K   + +++  + E++    L  P R +  + 
Sbjct: 55  SPISLYFHIPFCQSSCYFCGCNTVISNNKNIAKPYLEHLVREIKHTSNLIDPDRKVLQVH 114

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ ++   +  +   I +++ +    EI++E NP  V+ N     R+ G NRIS 
Sbjct: 115 WGGGTPNYLDCDQVEFLWKHIHRHFNIDPQAEISVEINPRYVDQNYISFLREIGFNRISF 174

Query: 136 GVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           G+Q    Q  + + R          ++ I  A+  F  ++ DLIY LP QT+  +   ++
Sbjct: 175 GIQDFNSQVQKAVNRIQPEELLVNVMSWIKAAK--FDSVNVDLIYGLPHQTLQTFRETVK 232

Query: 193 RALSYAVDHLSLYQL 207
           + ++   D + ++  
Sbjct: 233 KTVALDPDRIVVFNF 247


>gi|302348527|ref|YP_003816165.1| coproporphyrinogen III oxidase [Acidilobus saccharovorans 345-15]
 gi|302328939|gb|ADL19134.1| coproporphyrinogen III oxidase [Acidilobus saccharovorans 345-15]
          Length = 398

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 17/271 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           L +YVH PFC   CP+C F S   R +     +++S   E++  M +  G R    ++ G
Sbjct: 24  LPLYVHVPFCPFMCPFCVFFSVPYR-EAAARAYVKSLTAEVEGLMSRWEGAR-FPEVYVG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++  + +  +LD I    +    VE ++E +P  V+ N       AGV RISLGV
Sbjct: 82  GGTPTMLT-EGVCELLDVI---RSYQGAVEASVEGSPYDVDDNKVSMLASAGVTRISLGV 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS     L  LGR   +SEAI +   A +    ++ D+I+  P Q       E++   + 
Sbjct: 138 QSFFPDRLARLGRPRISSEAILSTIEACSRVKTVNVDIIFNYPGQREGDLIDEVEAFYNS 197

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             + L+LY        L   + +   +   SE     LY L  +++ A  L   +++   
Sbjct: 198 KANQLTLYP-------LMPSIREPATVCPCSEKRERALYRL--AVSQARRLGLTQLTAWC 248

Query: 258 FLGAESLHNLNYWRYGD-YIGIGPGAHSRVK 287
           F  +    +  Y    D ++G+G GA S ++
Sbjct: 249 FSKSSGGLSDEYIVDSDLFVGVGAGAMSHLR 279


>gi|67923603|ref|ZP_00517075.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Crocosphaera watsonii WH 8501]
 gi|67854573|gb|EAM49860.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Crocosphaera watsonii WH 8501]
          Length = 465

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFG 77
           L +Y H PFC   C +C  N+ +   K     +++  +++++   +L +  RS++ I +G
Sbjct: 57  LSLYCHIPFCETACYFCGCNTIITGNKKIAPPYLEYLISDIERTAELISDKRSVNQIHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I  + + + KN+ +  N EI+IE NP  ++ N     R  G NRIS G+
Sbjct: 117 GGTPNYLNQSQIDQLFNTLVKNFNIDKNAEISIEVNPRYLDRNLVFFLRNLGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +  + + R          +   R   F  ++ DLIY LP Q    ++  +++ + 
Sbjct: 177 QDFDPKVQKAINRIQPEEMLFNVMGWMREAEFESVNVDLIYGLPYQNRHTFKKTVEKTIE 236

Query: 197 YAVDHLSLYQLT 208
              + ++++   
Sbjct: 237 LDPNRIAVFNFA 248


>gi|291449110|ref|ZP_06588500.1| CalE1 [Streptomyces roseosporus NRRL 15998]
 gi|291352057|gb|EFE78961.1| CalE1 [Streptomyces roseosporus NRRL 15998]
          Length = 451

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 5/212 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+  G   P
Sbjct: 34  AAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTARYLDALDRQALAVREALGDEEP 93

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K      S V +++E +PS+   +       
Sbjct: 94  VRFAAAAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPSTATADRLAVLAD 153

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+S+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 154 RGTTRVSIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNVDLIYGIDGQTERS 213

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           W   L  AL++  + L LY L +   T  +++
Sbjct: 214 WLASLDAALAWRPEELYLYPLYVRPLTGLHRL 245


>gi|196233023|ref|ZP_03131872.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
 gi|196223001|gb|EDY17522.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
          Length = 411

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 21/278 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGGTPSLIE 85
           C K+C +C F  +  +     + ++ + + E++   +  L   R    I+FGGGTPS + 
Sbjct: 30  CRKRCHFCYFRVYTDKNADEIKRYLDAGIAELEIYAKSPLIRGRKPRFIYFGGGTPSYLS 89

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  + D + +        E+  EA P ++        R+ GV R+SLGV++ +   L
Sbjct: 90  VAQLKSLTDRMKELLPWDEAEEVAFEAEPGTLNEAKLSAIREIGVTRLSLGVENFDSHIL 149

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              GR H   E   A + AR+I FP+++ DLI  + ++T   W   +++ +    D +++
Sbjct: 150 EINGRAHRTDEIYRAYNFARSIGFPQINIDLISGMVEETDENWRENVRKTVELLPDSVTI 209

Query: 205 YQLTIEKGTLFYK-MHKDGDLVLPSEN----------VAVDLYNLTQSITSAHGLHAYEI 253
           YQ+ +   T  YK M  +G L  P  N             +L  +  ++TS +     + 
Sbjct: 210 YQMEVPYNTGIYKEMKAEGKLTAPVANWHTKRGWVDYAFSELEKVGYTVTSGY-TAVRDP 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
               F+  ++L     W   D +G+G  + S +  G+H
Sbjct: 269 QKTKFVYRDAL-----WSGADLVGLGVASFSHI-AGTH 300


>gi|239945653|ref|ZP_04697590.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|239992122|ref|ZP_04712786.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           11379]
          Length = 460

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 5/212 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+  G   P
Sbjct: 43  AAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTARYLDALDRQALAVREALGDEEP 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K      S V +++E +PS+   +       
Sbjct: 103 VRFAAAAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPSTATADRLAVLAD 162

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+S+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 163 RGTTRVSIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNVDLIYGIDGQTERS 222

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           W   L  AL++  + L LY L +   T  +++
Sbjct: 223 WLASLDAALAWRPEELYLYPLYVRPLTGLHRL 254


>gi|229071823|ref|ZP_04205037.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus F65185]
 gi|228711302|gb|EEL63263.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus F65185]
          Length = 156

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+H PFC   C YCDFN   + R  V Q  ++     E+    Q     SI +IF GG
Sbjct: 4   AAYIHIPFCQHICHYCDFNKVFIERQPVDQ--YLDYLEKEIINTVQKVPFDSIKTIFVGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GTP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GV
Sbjct: 62  GTPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           Q+  ++ L  +GR H   +A  AI  A+ +
Sbjct: 122 QTFRDELLEKIGRKHTREDAFLAIREAQEV 151


>gi|171463796|ref|YP_001797909.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193334|gb|ACB44295.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 471

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 6/207 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A E     +    L +Y H PFC   C YC  N  + +       +I+    EM  +
Sbjct: 50  YLGALER--VAKADEPLSLYFHLPFCPNICYYCGCNKIITKDHGRSAKYIKYLSKEMAMV 107

Query: 63  RQLTGPRS---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +  G +    +S + +GGGTP+ +  + +  ++    +++ +    E +IE +P  V  
Sbjct: 108 TKAMGAQKKILVSQLHWGGGTPTFLSHEEMIELMHHTREHFELLPGGEYSIEIDPRRVTE 167

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
            +     + G NRISLGVQ         + R     E  A I+ +R   F   S DLIY 
Sbjct: 168 KDIALLAELGFNRISLGVQDFNLAVQEAVHRVQTIEETQAVINWSRKYGFKSRSVDLIYG 227

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LPKQT   ++  +   L+   D LS+Y
Sbjct: 228 LPKQTPVTFKETVDAVLAMNPDRLSVY 254


>gi|33601130|ref|NP_888690.1| coproporphyrinogen III oxidase [Bordetella bronchiseptica RB50]
 gi|33575565|emb|CAE32643.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella
           bronchiseptica RB50]
          Length = 474

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 2/205 (0%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A       +    + +YVH PFC   C YC  N  V R+      ++ +   E+   
Sbjct: 53  YHQALAERTASRRGEPMSLYVHVPFCDSVCYYCACNKVVTRHHERAAPYLDALGQELALQ 112

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +  G    +S +  GGGTP+ +    +  ++  +   +T++ + E++IE +P + +   
Sbjct: 113 VEALGSGEPVSHLHLGGGTPTFLSDAELTRLMAMLRGAFTLTPDAEVSIEVDPRTADRGR 172

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S GVQ  + +  + + R     +    +  AR + F  ++ DLIY LP
Sbjct: 173 LAHLRELGFNRLSFGVQDFDPRVQQAVHRVQPFEDVRQLMLAARELGFGSINVDLIYGLP 232

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT+  +   +++      D ++LY
Sbjct: 233 HQTLASFARTVEQVGELRPDRIALY 257


>gi|323155162|gb|EFZ41349.1| oxygen-independent coproporphyrinogen III oxidase domain protein
           [Escherichia coli EPECa14]
          Length = 200

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 78/147 (53%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  V R +   + ++ +   E+     L   R +S + +GG
Sbjct: 53  LSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  G NR+S+GVQ
Sbjct: 113 GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR 165
              ++  R + R  +     A ++ AR
Sbjct: 173 DFNKEVQRLVNREQDEEFIFALLNHAR 199


>gi|19704106|ref|NP_603668.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714310|gb|AAL94967.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 411

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 10/272 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFF 76
           LG+Y H P+C K C +C+ N   ++     E + +    E++     +      I  +FF
Sbjct: 43  LGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYEFCKTSEIDVVFF 100

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + GVNRIS+G
Sbjct: 101 GGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENGVNRISVG 160

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           +Q+   +  + L R ++    +  +   +  F  +   D+IY    QT  +   +     
Sbjct: 161 IQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTDEEVLQDADLLA 220

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD--LYNLTQSITSAHGLHAYEI 253
               D  S Y L I  G+   K  ++ D  +   N+A D  L+NL  +     G    E+
Sbjct: 221 EVGADSASFYSLMIHDGSNISK-EREKDKSVYIYNLARDEKLHNLFYNRCIEKGYKLLEL 279

Query: 254 S--NHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           +   +     + + N N  R    IG G G H
Sbjct: 280 TKITNGRDAYKYIRNNNGLRNLLPIGAGAGGH 311


>gi|33596577|ref|NP_884220.1| coproporphyrinogen III oxidase [Bordetella parapertussis 12822]
 gi|33573278|emb|CAE37259.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella
           parapertussis]
          Length = 474

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 2/205 (0%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A       +    + +YVH PFC   C YC  N  V R+      ++ +   E+   
Sbjct: 53  YHQALAERTASRRGEPMSLYVHVPFCDSVCYYCACNKVVTRHHERAAPYLDALGQELALQ 112

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +  G    +S +  GGGTP+ +    +  ++  +   +T++ + E++IE +P + +   
Sbjct: 113 VEALGSGEPVSHLHLGGGTPTFLSDAELTRLMAMLRGAFTLTPDAEVSIEVDPRTADRGR 172

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S GVQ  + +  + + R     +    +  AR + F  ++ DLIY LP
Sbjct: 173 LAHLRELGFNRLSFGVQDFDPRVQQAVHRVQPFEDVRQLMLAARELGFGSINVDLIYGLP 232

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT+  +   +++      D ++LY
Sbjct: 233 HQTLASFARTVEQVGELRPDRIALY 257


>gi|18310917|ref|NP_562851.1| coproporphyrinogen III oxidase [Clostridium perfringens str. 13]
 gi|18145599|dbj|BAB81641.1| probable coproporphyrinogen III oxidase [Clostridium perfringens
           str. 13]
          Length = 480

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKGLNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|260887820|ref|ZP_05899083.1| coproporphyrinogen oxidase, anaerobic [Selenomonas sputigena ATCC
           35185]
 gi|330838611|ref|YP_004413191.1| Coproporphyrinogen dehydrogenase [Selenomonas sputigena ATCC 35185]
 gi|260862426|gb|EEX76926.1| coproporphyrinogen oxidase, anaerobic [Selenomonas sputigena ATCC
           35185]
 gi|329746375|gb|AEB99731.1| Coproporphyrinogen dehydrogenase [Selenomonas sputigena ATCC 35185]
          Length = 508

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 132/293 (45%), Gaps = 31/293 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------- 69
            ++ VYV  PFC  +C YC F +++    +  +  + +F     W + L   +       
Sbjct: 176 RTISVYVGIPFCRSRCLYCSFPAYI----LPNDEQLSAFFA--AWDKDLAAAKREIERHR 229

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             + SI+ GGGTP+ +   +   +L  +   +      E T+EA  P ++        ++
Sbjct: 230 LKVQSIYIGGGTPTSLSNADFERVLSLVEGAFYGEHTGEFTVEAGRPDTMTPEKALSMKE 289

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
             V+R+S+  Q++++++L  +GR H   + +    L R      ++ D+I  LP +T + 
Sbjct: 290 HRVSRVSVNPQTMQQRTLERIGRAHTPEDIVRMFRLLRETGDFSINMDVILGLPGETRSD 349

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               + + L+ A D ++L+ L +++G+   KMH + +  LP++     ++          
Sbjct: 350 IADTMAKVLALAPDDVTLHSLALKRGSKL-KMHLE-EYELPNDAEVQAMFRTAMEQVQDK 407

Query: 247 GLHAYEISNHSFL------------GAESLHNLNYW-RYGDYIGIGPGAHSRV 286
           G   Y +    ++            GAES++N+     +   +GIG  A S++
Sbjct: 408 GFLPYYLYRQGYMSGQMENVGCARPGAESMYNMQIMDEHQTILGIGCAATSKI 460


>gi|311695844|gb|ADP98717.1| oxygen-independent coproporphyrinogen III oxidase [marine bacterium
           HP15]
          Length = 472

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 6/232 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
           L +Y H PFC   C YC  N  + + +     +++  L E     +L G  R ++ + +G
Sbjct: 66  LSLYTHLPFCAHLCYYCACNKVITKKRDKAMPYVERVLKEAAIQSKLFGVDRPVTQLHWG 125

Query: 78  GGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++ G  +  N       + ++E +P  V+ +        G NRISL
Sbjct: 126 GGTPTFLPKDVMEHLMAGYGELFNLQTGEERDYSVEIDPREVDQDTLPTLWNLGFNRISL 185

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ +  +  + + R    +   A ++ AR I F  ++ DLIY LP QT   +   L+  
Sbjct: 186 GVQDVNPEVQKAVNRTQPRAMTEAVLNEARRIGFRSINLDLIYGLPYQTPESFAETLEAV 245

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSA 245
           +  + D LS++         + +    GD L  P + +A+ L+N    +  A
Sbjct: 246 IEMSPDRLSVFSYAHLPERFYPQTRIQGDTLPSPQQKLAI-LHNTINRLLEA 296


>gi|302184943|ref|ZP_07261616.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           642]
          Length = 460

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           + S  L +YVH PFC   C YC  N  + + +   + ++Q    EMQ +     P + + 
Sbjct: 49  KASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEMQMLACHLAPGQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G 
Sbjct: 109 QLHLGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPAQNPQTFSH 228

Query: 190 ELQRALSYAVDHLSLY 205
            + + +    D LS++
Sbjct: 229 TVDKIIDLQPDRLSVF 244


>gi|172059862|ref|YP_001807514.1| coproporphyrinogen III oxidase [Burkholderia ambifaria MC40-6]
 gi|171992379|gb|ACB63298.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MC40-6]
          Length = 463

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 9/251 (3%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYLRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSV 117
              L  P R ++ + +GGGTP+ +    +A ++    +++ V    ++ E +IE +P +V
Sbjct: 100 QATLFDPARPVTQLHWGGGTPTFLSDAEMAELM-ATTRDYFVLAPDADAEFSIEIDPRTV 158

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                   R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLI
Sbjct: 159 TPARLVHLRNIGFNRLSLGVQDFDPIVQQAINRVQPLAMTADLMSAARATGFHSVSVDLI 218

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L 
Sbjct: 219 YGLPHQTVAVFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPPPETRIALL 277

Query: 237 NLTQSITSAHG 247
            L   + ++ G
Sbjct: 278 GLAIDMLTSAG 288


>gi|313497896|gb|ADR59262.1| HemN [Pseudomonas putida BIRD-1]
          Length = 460

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  +  + FG
Sbjct: 54  LSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLVACHLAPKQRVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLIYGLPKQTPEGFARTVEEV 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IRLQPDRLSVF 244


>gi|218263263|ref|ZP_03477439.1| hypothetical protein PRABACTJOHN_03123 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222837|gb|EEC95487.1| hypothetical protein PRABACTJOHN_03123 [Parabacteroides johnsonii
           DSM 18315]
          Length = 455

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 9/197 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----- 68
           Q    +  Y H PFC + C YC  NS    Y V +   +  ++  +     L  P     
Sbjct: 44  QKPELISFYFHIPFCHRLCHYCGCNS----YPVPEGEIVDRYVEALHKEIDLVLPLLDNR 99

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +S I +GGG+P+++    +  + D +   +   +N EI +E +P  +    +    K+
Sbjct: 100 RKVSQIHYGGGSPTVLPAIELEELNDHVLDKFPTIANPEIAVECHPGWIMEQGWVQLVKS 159

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G NR+S+GVQ   ++ LR + R  +       + + R++  R++ D +Y LP QT   + 
Sbjct: 160 GFNRLSIGVQDFNKEVLRGVNRQSSRIPMEDVMEILRSLDVRVNMDFLYGLPFQTEESFA 219

Query: 189 MELQRALSYAVDHLSLY 205
             ++RA++   D L  +
Sbjct: 220 QTIERAVAMKPDRLVTF 236


>gi|114776348|ref|ZP_01451393.1| coproporphyrinogen III oxidase [Mariprofundus ferrooxydans PV-1]
 gi|114553178|gb|EAU55576.1| coproporphyrinogen III oxidase [Mariprofundus ferrooxydans PV-1]
          Length = 479

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 10/200 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGP--- 68
           +  L +Y+H PFC   C YC  +  V +     E +++  L E+      +++  G    
Sbjct: 63  NTPLSLYIHIPFCNTVCYYCGCSKIVTKQYHRAEPYLELLLKEIDRVADCLKEADGTDCM 122

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYR 126
           R ++ + FGGGTP+ +    +  I+  + +  N+      E +IE +P   + +  +  +
Sbjct: 123 RPVTQLHFGGGTPTFMNNDQMRTIMAKLRERFNFVAKDEGEFSIEIDPRECDEDTVRVLQ 182

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
           + G+NR+S+GVQ  +    + + R  +  E +  ++ AR + F  M+ DL+Y LP QT+ 
Sbjct: 183 EIGLNRMSMGVQDFDPIVQKAVNRIQSKEETLRVLNEARAHGFESMNIDLMYGLPHQTVD 242

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +   L   + ++ D ++L+
Sbjct: 243 TFNTTLDTIIEFSPDRIALF 262


>gi|221134831|ref|ZP_03561134.1| coproporphyrinogen III oxidase [Glaciecola sp. HTCC2999]
          Length = 456

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 1/191 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S  + +Y+H PFC   C YC  N  V R     + ++     E+  + Q     +IS I 
Sbjct: 53  STPISLYIHIPFCHSLCYYCGCNKRVTRDNSKADEYLHYLGLEIAQIAQHNPEITISHIH 112

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGG+PS +  +    ++  +  ++ ++S  +++IE +P ++     Q   K G  R+SL
Sbjct: 113 YGGGSPSFLSIEQHTKLMHLLTSHFNLASECQMSIECDPRNLTPPYIQHLAKLGFTRMSL 172

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ ++      + R  ++S   A I  A +  F  ++ D+I  LP+Q +T  +  L   
Sbjct: 173 GVQDVDPIVQTTINRVQSSSHIQACIADAYHAGFSSINLDIIVGLPEQNLTTIQHTLSAL 232

Query: 195 LSYAVDHLSLY 205
             + VD +S++
Sbjct: 233 AQFNVDRISVF 243


>gi|296328686|ref|ZP_06871203.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154285|gb|EFG95086.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 411

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 10/272 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFF 76
           LG+Y H P+C K C +C+ N   ++     E + +    E++     +      I  +FF
Sbjct: 43  LGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYEFCKTSEIDVVFF 100

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + GVNRIS+G
Sbjct: 101 GGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKIMEENGVNRISVG 160

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRAL 195
           +Q+   +  + L R ++    +  +   +  F  +   D+IY    QT  +   +     
Sbjct: 161 IQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTDEEVLQDADLLA 220

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD--LYNLTQSITSAHGLHAYEI 253
               D  S Y L I  G+   K  ++ D  +   N+A D  L+NL  +     G    E+
Sbjct: 221 EVGADSASFYSLMIHDGSNISK-EREKDKSVYIYNLARDEKLHNLFYNRCIEKGYKLLEL 279

Query: 254 S--NHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           +   +     + + N N  R    IG G G H
Sbjct: 280 TKITNGRDAYKYIRNNNGLRNLLPIGAGAGGH 311


>gi|239815800|ref|YP_002944710.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
 gi|239802377|gb|ACS19444.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
          Length = 470

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 2/200 (1%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E    G  +  L +YVH PFC   C YC  N  V R+      ++     E +      G
Sbjct: 56  ERRDAGASAAPLSLYVHIPFCESLCYYCACNKVVTRHHERATQYLAYLARETRLQAAQLG 115

Query: 68  PRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            R+ +S +  GGGTP+ +    +  +L  + +++      E +IE +P +V+        
Sbjct: 116 RRAAVSQLHLGGGTPTFLSDAELGELLAMLRESFDFVPGGEWSIEIDPRTVDAARLASLA 175

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G NR+S GVQ  + +  + + R   A +    +  AR + F  ++ DLIY LP+Q   
Sbjct: 176 TLGFNRLSFGVQDFDPEVQKAVHRIQPAHQVFGLMADARALGFKSINADLIYGLPRQNDR 235

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +E  + +      D ++LY
Sbjct: 236 SFERTMAQVCELRPDRIALY 255


>gi|170699820|ref|ZP_02890852.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
 gi|170135272|gb|EDT03568.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
          Length = 463

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 9/251 (3%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYLRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSV 117
              L  P R ++ + +GGGTP+ +    +A ++    +++ V    ++ E +IE +P +V
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDAEMAELM-ATTRDYFVLAPDADAEFSIEIDPRTV 158

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                   R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLI
Sbjct: 159 TPARLVHLRNIGFNRLSLGVQDFDPVVQQAINRVQPLAMTSDLMSAARATGFHSVSVDLI 218

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L 
Sbjct: 219 YGLPHQTVAVFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPPPETRIALL 277

Query: 237 NLTQSITSAHG 247
            L   + ++ G
Sbjct: 278 GLAIDMLTSAG 288


>gi|163846229|ref|YP_001634273.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222523979|ref|YP_002568449.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
 gi|163667518|gb|ABY33884.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222447858|gb|ACM52124.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
          Length = 457

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           +SL VYVH PFC ++C YC  N+   R     ++++     E+  +    G  R +  + 
Sbjct: 50  DSLSVYVHLPFCAERCAYCGCNATSTRRPDVVDHYLDRIERELSMVIAALGSNRRVVQLH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +       ++  +   +T+    E+ +E +P          +R+ G NRIS 
Sbjct: 110 WGGGTPNFLNEAQSRRLMGMLRTAFTLDPAAEVALEVDPRIGSREQIFLFRELGFNRISF 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ +       +GR     +    +  AR+  F  ++ DL+Y LP QT T +   LQ  
Sbjct: 170 GVQDIAPAVQVAIGRIQPLHQTETVVKAARDAGFCSINIDLVYGLPYQTPTSFAATLQAM 229

Query: 195 LSYAVDHLSLY 205
           +    D ++ +
Sbjct: 230 IDLRPDRIACF 240


>gi|209517092|ref|ZP_03265939.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
 gi|209502485|gb|EEA02494.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
          Length = 461

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 21/295 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSI 71
           G  S  L +Y H PFC   C YC  N  V + +     +++    E+          R +
Sbjct: 49  GAASTDLSLYFHIPFCDTVCFYCGCNKVVTKNRAHARPYLERLKREIGLQAASFDTRRPV 108

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +    +A ++    +++ +      E +IE +P     +     R+ G
Sbjct: 109 SQLHWGGGTPTFLSHDEMAELVAATREHFQLLPDGEAEYSIEVDPREASPDTIALLRRLG 168

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  + +  + + R        + I  AR + F  +  DLIY LP QT+  + 
Sbjct: 169 FNRLSLGVQDFDPRVQQAINRIQPFEMTASVIQAARMHGFHSIGVDLIYGLPHQTVASFS 228

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLP-SENVAVDLYNLTQSITSAH 246
             L   L  A D LS++          +KM +  D   LP SE     L  + + +T A 
Sbjct: 229 RTLDTMLGLAPDRLSVFGYA--HMPQIFKMQRQMDPATLPSSEQRLALLQRVVEQLTEAG 286

Query: 247 ----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGS 290
               G+  + +       A++   L  N+  Y      D IG   GA S  KVG 
Sbjct: 287 YVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSIGKVGD 339


>gi|221067711|ref|ZP_03543816.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
 gi|220712734|gb|EED68102.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
          Length = 460

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 3   YLSAYENNMTGQGSNSL--GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+ A +   T  GS +L   VYVH PFC   C YC  N  V ++      ++     E+ 
Sbjct: 37  YILALKQRKTHSGSRALPLSVYVHVPFCESLCYYCACNKIVTKHHEKAAEYLDYLGRELA 96

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              +  G  + +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V  
Sbjct: 97  MHTEHCGKGQLVSQLHLGGGTPTFFSDAELQQLMLLMREHFKLDPAGEYSIEVDPRTVSN 156

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +  +  G NR+S GVQ  +    + + R   A +    +  AR + F  ++ DLIY 
Sbjct: 157 ERLKTLKDMGFNRLSFGVQDFDPAVQKAVHREQPAEQVFELVAEARRLGFVSINVDLIYG 216

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LPKQT   +   L +      D ++LY
Sbjct: 217 LPKQTSESFARTLAQVNELRPDRIALY 243


>gi|170078594|ref|YP_001735232.1| coproporphyrinogen III oxidase [Synechococcus sp. PCC 7002]
 gi|169886263|gb|ACA99976.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. PCC 7002]
          Length = 465

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 2/197 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPR 69
           M       L +Y H PFC K C +C  N+ + +YK     ++   +  +Q +  L  G R
Sbjct: 49  MGNYKKTPLSLYCHIPFCEKPCYFCGCNTIITQYKPAAATYLDYLIRHIQQVAPLVQGDR 108

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  + +GGGTP+ +  + +  +   +  N+  + + EI+IE NP  V         + G
Sbjct: 109 LVQQLHWGGGTPNYLNLEQVTRLWQTLQDNFQFAPDAEISIEINPCEVSREYIFVLHQLG 168

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             RIS G+Q    Q    + R     +    +   R   F  ++ DLIY LP QT+  + 
Sbjct: 169 FKRISFGIQDFNPQVQAAVNRIQPEEKLFEVMAWIREAGFESVNVDLIYGLPYQTLATFT 228

Query: 189 MELQRALSYAVDHLSLY 205
             +++ +    D ++++
Sbjct: 229 ETVEKTIQLNPDRIAVF 245


>gi|296157130|ref|ZP_06839966.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
 gi|295892466|gb|EFG72248.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
          Length = 461

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 21/295 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G  S  L +Y H PFC   C YC  N    + +     ++     E+          R +
Sbjct: 49  GASSTDLSLYFHIPFCDTVCFYCGCNKVATKNRAHARPYLAQLKREIALQAACFDTRRPV 108

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +     A ++    +++ +   +  E +IE +P           RK G
Sbjct: 109 SQLHWGGGTPTFLSHDETAELMAATREHFMLLPDAEAEYSIEVDPREASPETIAHLRKLG 168

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    + + R        + +  AR+  F  +  DLIY LP QT+  + 
Sbjct: 169 FNRLSLGVQDFDPVVQQAINRIQPLEMTASVMQAARDTGFHSIGVDLIYGLPHQTVESFS 228

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVD-LYNLTQSITSAH 246
             L   +  A D LS++          +KM +  D   LPS +V +  L  + + +T A 
Sbjct: 229 RTLDTMIELAPDRLSVF--AYAHMPQLFKMQRQMDPATLPSPDVRLAILQRVVERLTGAG 286

Query: 247 ----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGS 290
               G+  + +       A++   L  N+  Y      D IG   GA S  KVG 
Sbjct: 287 YVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSIGKVGD 339


>gi|295105340|emb|CBL02884.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Faecalibacterium prausnitzii SL3/3]
          Length = 489

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 5/206 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E+  +R        
Sbjct: 155 GSAPKTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKLVQPYVDCLCKEVAEIRAQAERAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
           ++ SI+ GGGTP+ +    +  ++  + +N+ ++  VE T+EA  P   +       ++ 
Sbjct: 215 TLCSIYIGGGTPTSLSAAQLRQLMGTVRENFDLTKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  +  L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDAVLENIGRKHSAQDILDCYADARRAGHEDINMDLIAGLPGDTVEGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
           E  L++A++   ++++++ LT+++ +
Sbjct: 335 EHSLRQAIALQPENITVHTLTLKRAS 360


>gi|118580893|ref|YP_902143.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118503603|gb|ABL00086.1| coproporphyrinogen III oxidase, anaerobic [Pelobacter propionicus
           DSM 2379]
          Length = 453

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/346 (21%), Positives = 152/346 (43%), Gaps = 17/346 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI 74
             L +Y+H PFC  +C +C+   H    +V QE +++  + +++   +L     +    I
Sbjct: 56  TELLLYIHLPFCFSECLFCNSFPHKVDTQVQQE-YLRRLILQIELYERLGLFKGKKAKCI 114

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN-NFQGYRKAGVNRI 133
            FGGGTP+      I  ++D +    T++ +  I  EA+P+++E           G NRI
Sbjct: 115 CFGGGTPTAFANSEIRKVMDTVRACVTLTDDCSIATEAHPATMEHEARVLDLADMGFNRI 174

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G Q+ + Q L+   RN+  S+    +   +     ++ D++  LP Q++   + +L+ 
Sbjct: 175 SMGCQTFDPQILQLCNRNNTPSQVQGIVQTVQRAGMMINIDMMTGLPGQSIESVQADLRM 234

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D +   +  I    +     +  +L++P + +  D+  + Q      G   YE 
Sbjct: 235 LEQIRPDAVEYIRHEIVNPLIARLYTQRPELIVPDDTL-FDMVFMAQEWMDGQG---YEQ 290

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE--SWLKMVRKN 311
           +       +  +  ++ R    I  G      ++  S+  AI  + H E  S+ ++V K 
Sbjct: 291 NGRFSCDRQWPYRYHWLRETPIISFG------IRTRSYSPAICFDSHEELASFNRLVDKG 344

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDI 356
              V     LS  ++    L++ L+L+ G+ +  +    G + LD+
Sbjct: 345 IPPVGRYIMLSRRERMYRRLILSLQLKGGLDISRFHASFGESPLDV 390


>gi|298491985|ref|YP_003722162.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
 gi|298233903|gb|ADI65039.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
          Length = 460

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 2/198 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +  ++L +Y H PFC   C +C  N+ +   K   + ++ + + E+    +L    R 
Sbjct: 50  SNERQSALSLYFHIPFCQTACYFCGCNTVISNNKNIAKAYLHNLVQEIHNTAELIDTSRK 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +E   +  + + I + +T+ S+ E++IE NP  V     Q  R  G 
Sbjct: 110 VLQVHWGGGTPNYLELDQVEFLWNKINRYFTIDSSAEVSIEINPRYVNKEYIQFLRDIGF 169

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+Q L  +    + R         A+   +   F  ++ DLIY LP QT+  ++ 
Sbjct: 170 NRISFGIQDLNPKVQAAVNRIQPEKMLFDAMGWIKEANFSSVNVDLIYGLPYQTLHTFQE 229

Query: 190 ELQRALSYAVDHLSLYQL 207
            +++ +    D + ++  
Sbjct: 230 TVEKTIILDPDRIVVFNF 247


>gi|221213749|ref|ZP_03586723.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD1]
 gi|221166538|gb|EED99010.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD1]
          Length = 463

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 13/243 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP---- 68
           G  S+ L +Y H PFC   C YC  N    R         + +L +++    L       
Sbjct: 51  GASSSELSLYFHIPFCNTACFYCGCN----RIATNNHRRARPYLDQLKREIALQATLFDR 106

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGY 125
            R ++ + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V        
Sbjct: 107 SRPVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVTPATLVHL 166

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+SLGVQ  +    R + R    +     +  AR   F  +S DLIY LP QT+
Sbjct: 167 RTIGFNRLSLGVQDFDPDVQRAINRIQPLAMTADVMAAARATGFHSISVDLIYGLPHQTV 226

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+  +  A D LS++        LF    +  D  LP     + L  L   + +
Sbjct: 227 AAFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRRIDDATLPPPETRIALLGLAIDMLT 285

Query: 245 AHG 247
           + G
Sbjct: 286 SAG 288


>gi|148546842|ref|YP_001266944.1| coproporphyrinogen III oxidase [Pseudomonas putida F1]
 gi|148510900|gb|ABQ77760.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas putida F1]
          Length = 460

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  +  + FG
Sbjct: 54  LSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLIACHLDPKQRVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLIYGLPKQTPEGFARTVEEV 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IRLQPDRLSVF 244


>gi|149203240|ref|ZP_01880210.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
 gi|149143073|gb|EDM31112.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
          Length = 451

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 6/191 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   +       ++++  TE+  + RQL     +S + +G
Sbjct: 51  ISLYVHVPFCRRLCWFCACRTQGTQTDAPVAAYLETLKTEIAMLGRQLPRGVRLSRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  ++ +   I      +   E ++E +P+ ++         AG+NR S+GV
Sbjct: 111 GGTPTLLSPGMMSELAGAIRDIAPFTDTTEFSVEIDPNEIDAARLDALAGAGMNRASIGV 170

Query: 138 QSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q  +EQ  + +GR         A+  I  AR +   ++ D++Y LP Q   +    +Q+ 
Sbjct: 171 QDFDEQIQKSIGRIQGYDITRHAVDEIR-ARGV-KSLNADILYGLPHQNRARITESVQKL 228

Query: 195 LSYAVDHLSLY 205
           LS   D ++LY
Sbjct: 229 LSLNPDRVALY 239


>gi|171318308|ref|ZP_02907468.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
 gi|171096510|gb|EDT41407.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
          Length = 463

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 7/240 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  S+ L +Y H PFC   C YC  N            +++    E+     L  P R +
Sbjct: 51  GASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAQQAALFDPARPV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRKA 128
           + + +GGGTP+ +    +A  L    +++ V    ++ E +IE +P +V        R  
Sbjct: 111 TQLHWGGGTPTFLSDAEMAE-LTAATRDYFVLAPDADAEFSIEIDPRTVTPARLVHLRNI 169

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY LP QT+  +
Sbjct: 170 GFNRLSLGVQDFDPVVQQAINRVQPLALTADLLSAARTTGFHSVSVDLIYGLPHQTVAVF 229

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  +  A D LS++        LF    +  D  LP   + + L  L   + ++ G
Sbjct: 230 ARTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPPPEMRIALLGLAIDMLTSAG 288


>gi|324111504|gb|EGC05485.1| radical SAM superfamily protein [Escherichia fergusonii B253]
          Length = 416

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 3/188 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  +         +N+I++ + + + M+    P   +S   GGGT
Sbjct: 46  LYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIVQARQMQ--LAPVDWASFTIGGGT 103

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L+    +  +  G+     V + +   IE +PS          R+  V+R+S+GVQS 
Sbjct: 104 PLLLNVGQLWRLFCGVFDELQVDTQIFKAIETSPSDTTAEKVALLRQLAVSRVSIGVQSF 163

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  L R H+A  A  A+ L R   FP ++ D+IY +P QT       L +AL Y  
Sbjct: 164 NDLELATLHRRHSAVNAHRALELLRRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQP 223

Query: 200 DHLSLYQL 207
           D L LY L
Sbjct: 224 DELFLYPL 231


>gi|182434745|ref|YP_001822464.1| coproporphyrinogen III oxidase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463261|dbj|BAG17781.1| putative oxygen-independent coproporphyrinogen oxidase
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 461

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 8/228 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R   G   P
Sbjct: 43  AAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTTRYLDALERQADSVRDALGDEQP 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K        V +++E +P++   +       
Sbjct: 103 VRFAAAAFGGGTPTFLTAGELERLCDTAEKRMGADLGAVPLSVETSPATATADRLAVLAD 162

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  RIS+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 163 RGTTRISIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNIDLIYGIDGQTERS 222

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           W   L  AL++  + L LY L +   T    +H+ G  V   E  A++
Sbjct: 223 WLASLDAALAWRPEELYLYPLYVRPLT---GLHRLGPAVTGPEARALE 267


>gi|295677384|ref|YP_003605908.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
 gi|295437227|gb|ADG16397.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
          Length = 461

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 23/296 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G  S  L +Y H PFC   C YC  N  V + +     +++    E+          R +
Sbjct: 49  GAASTDLSLYFHIPFCDTVCFYCGCNKVVTKNRAHARPYLERLKREIALQAACFDTQRPV 108

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +    ++ ++    +++ +   +  E +IE +P     +     R  G
Sbjct: 109 SQLHWGGGTPTFLSHDEMSELMAATREHFNLLPDTEAEYSIEVDPREASPDTIALLRHLG 168

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  + +  + + R        + +  AR + F  +  DLIY LP QT+  + 
Sbjct: 169 FNRLSLGVQDFDPRVQQAINRMQPFEMTASVMQAARAHGFHSIGVDLIYGLPHQTVASFS 228

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPS--ENVAVDLYNLTQSITSA 245
             L   L  A D LS++          +KM +  D   LPS  E +A+ L  + + +T A
Sbjct: 229 RTLDTMLELAPDRLSVF--AYAHMPQLFKMQRQMDAATLPSSEERLAL-LQRVVERLTGA 285

Query: 246 H----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGS 290
                G+  + +       A++   L  N+  Y      D IG   GA S  KVG 
Sbjct: 286 GYVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLIGF--GASSIGKVGD 339


>gi|167563788|ref|ZP_02356704.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis EO147]
          Length = 464

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 5/230 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 SQLHWGGGTPTFLSDAETTELMAATREYFTLASDRAGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ+ +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQNFDRDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
             L   +    D LS++        LF    +  D  LP     + L  L
Sbjct: 232 RTLDTIVELEPDRLSVFGYA-HMPHLFRMQRQIDDAALPPPATWIALLGL 280


>gi|26990955|ref|NP_746380.1| coproporphyrinogen III oxidase [Pseudomonas putida KT2440]
 gi|24985978|gb|AAN69844.1|AE016623_6 oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida KT2440]
          Length = 460

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L +YVH PFC   C YC  N  + + +     ++Q    E+Q +     P+  +  + FG
Sbjct: 54  LSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQLVACHLDPKQRVEQLHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  + +++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +    I  AR + F  ++ DLIY LPKQT   +   ++  
Sbjct: 174 GVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLIYGLPKQTPEGFARTVEEV 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IRLQPDRLSVF 244


>gi|262164455|ref|ZP_06032193.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
 gi|262026835|gb|EEY45502.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
          Length = 484

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 10/242 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 95  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALMEELKQKAALPWTQTGVFHAVYIGG 153

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 154 GTPTELSPQQIRQLGRTIRHSFPLTADCEITLEGRINRFSDKMFDQALEGGFNRFSFGVQ 213

Query: 139 SLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S   Q  R   R  +    +E IAA  LA      +  DL+Y LP QT   +E +LQ  +
Sbjct: 214 SFNTQVRRRAKRLDDREVVTERIAA--LAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFM 271

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEIS 254
                 + LYQL +        +   G L  P+       LY +     + H L    + 
Sbjct: 272 DTGAQGIDLYQLMVGGSAPMLNLVDKGKLPPPATTPDKATLYQIGVEFMAKHHLRPVSV- 330

Query: 255 NH 256
           NH
Sbjct: 331 NH 332


>gi|163748451|ref|ZP_02155705.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161332029|gb|EDQ02706.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 460

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 20  GVYVHWPFCVKKCPYCDF------NSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSI 71
            +Y+H PFC K+C +C+F       + +  Y  ++ ++ +I S    +Q         + 
Sbjct: 51  ALYIHLPFCRKRCSFCNFFENGSNPARISHYVDELSKQLYIASKTPFVQ-------SGTF 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ ++   IA+I + I + + ++ + EIT+E   +      F     +G N
Sbjct: 104 DTVYVGGGTPTDMQASEIAIIGEAI-QAFPLAKDAEITLEGRINGFTHAKFNAALCSGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS + Q     GR  +    I  +  L+ +    +  DLI+ LP QTM  W+ +
Sbjct: 163 RFSFGVQSFDTQVRLAAGRFDDRETLIERLQELSEHPSATIVADLIFGLPGQTMEIWQQD 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
           LQ  +   V  + LYQL   +GT
Sbjct: 223 LQDVIQSGVHGVDLYQLIGLQGT 245


>gi|330986524|gb|EGH84627.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 460

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|257484879|ref|ZP_05638920.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331011097|gb|EGH91153.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 460

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|160945513|ref|ZP_02092739.1| hypothetical protein FAEPRAM212_03042 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443244|gb|EDP20249.1| hypothetical protein FAEPRAM212_03042 [Faecalibacterium prausnitzii
           M21/2]
          Length = 489

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 5/206 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E+  +R        
Sbjct: 155 GSAPKTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKMVQPYVDCLCKEVAEIRAQAERAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKA 128
           ++ SI+ GGGTP+ +    +  ++  + +N+ ++  VE T+EA  P   +       ++ 
Sbjct: 215 TLCSIYIGGGTPTSLSAAQLRQLMGTVRENFDLTKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  +  L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDAVLANIGRKHSAQDILDCYADARRAGHEDINMDLIAGLPGDTVEGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
           E  L++A++   ++++++ LT+++ +
Sbjct: 335 EHSLRQAIALQPENITVHTLTLKRAS 360


>gi|161525646|ref|YP_001580658.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|160343075|gb|ABX16161.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
          Length = 482

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 13/243 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP---- 68
           G  S+ L +Y H PFC   C YC  N    R         + +L +++    L       
Sbjct: 70  GASSSELSLYFHIPFCNTACFYCGCN----RIATNNHRRARPYLDQLKREIALQATLFDR 125

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGY 125
            R+++ + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V        
Sbjct: 126 SRAVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVTPATLVHL 185

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+SLGVQ  + +    + R    ++    +  AR   F   S DLIY LP QT+
Sbjct: 186 RTIGFNRLSLGVQDFDPEVQCAINRIQPLAQTADLLRAARTTGFHSTSVDLIYGLPHQTV 245

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+  +  A D LS++        LF    +  D  LP     + L  L   + +
Sbjct: 246 ATFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRRIDDATLPPPETRIALLGLAIDMLT 304

Query: 245 AHG 247
           + G
Sbjct: 305 SAG 307


>gi|71738016|ref|YP_275507.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558569|gb|AAZ37780.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320325148|gb|EFW81217.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329407|gb|EFW85400.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330880612|gb|EGH14761.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 460

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|330889027|gb|EGH21688.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 460

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|329894326|ref|ZP_08270196.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
 gi|328923122|gb|EGG30445.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
          Length = 465

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFG 77
           L +YVH PFC   C YC  N  V R     + ++ +   E+   R      R ++ + +G
Sbjct: 58  LSLYVHVPFCRSICYYCACNKVVTRTPGAGQEYLNALDKELARYRDWGLNQRLVTQLHWG 117

Query: 78  GGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  IA+N+  T + + E +IE +P +V        R  G NR+SL
Sbjct: 118 GGTPTYLSDAELTQLMHLIARNYQLTDAPDREYSIEIDPRTVSKQTIALLRGLGFNRLSL 177

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +    + + R           H  R + F  +SFDLIY LP Q+   +   L + 
Sbjct: 178 GIQDFDPLVQKAINRVQPYEMVADLTHSIREHGFKSLSFDLIYGLPHQSEQSFSKTLAKV 237

Query: 195 LSYAVDHLSLY 205
           +    D ++ Y
Sbjct: 238 IRLGPDRIACY 248


>gi|103487153|ref|YP_616714.1| coproporphyrinogen III oxidase [Sphingopyxis alaskensis RB2256]
 gi|98977230|gb|ABF53381.1| oxygen-independent coproporphyrinogen III oxidase [Sphingopyxis
           alaskensis RB2256]
          Length = 437

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 8/238 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           +  + +YVH PFC + C YC  N+     K    +++ +   E+  + ++L G   +  I
Sbjct: 44  ATPISLYVHIPFCEQICWYCGCNTGAAGRKQRLADYLAALRAEVALVAKRLGGRGRVQRI 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+ I P  +  +LD I   +      EI+IE +P  ++         A V R+S
Sbjct: 104 AFGGGSPNAIAPVELVRLLDRILTVFDCHRP-EISIELDPRGLDAEWALVLAAARVTRVS 162

Query: 135 LGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           LGVQ+      + +GR    S     +AA+ L R+I   ++FDL+Y LP Q +   +  L
Sbjct: 163 LGVQTFAPHVQQAIGRIQPLSHIERVVAALRL-RDI-DAINFDLMYGLPGQRLEDLDATL 220

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              +  A   ++L+        +  +   DG ++LP + +  D   L     +A G H
Sbjct: 221 DETIRLAPSRIALFGYAHLPDMIPRQRQIDG-VMLPDQRLRFDQAELGYRRLTAAGYH 277


>gi|218244993|ref|YP_002370364.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8801]
 gi|257058017|ref|YP_003135905.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8802]
 gi|218165471|gb|ACK64208.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8801]
 gi|256588183|gb|ACU99069.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8802]
          Length = 465

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           + +Y H PFC   C +C  N+ + + K     ++     ++     L  P R ++ I +G
Sbjct: 57  ISLYCHIPFCETACYFCGCNTIITKNKKVAPTYLDYLTKDISQTAALISPQRKVNQIHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    I  + + +  ++ +    EI+IE NP  ++ N     +  G NRIS G+
Sbjct: 117 GGTPNYLNQSQIEQLFNHLVSHFNIEQRAEISIEVNPRYIDKNYIFFLKSLGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q    Q    + R    S     +   R+  F   + DLIY LP QT+  ++  +++ + 
Sbjct: 177 QDFNPQVQEAINRIQPESMLFNVMGWMRDAGFDGANVDLIYGLPFQTLETFKETVKKTIQ 236

Query: 197 YAVDHLSLYQL 207
              D ++L+  
Sbjct: 237 LNPDRIALFNF 247


>gi|115350845|ref|YP_772684.1| coproporphyrinogen III oxidase [Burkholderia ambifaria AMMD]
 gi|115280833|gb|ABI86350.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria AMMD]
          Length = 463

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 7/250 (2%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYLRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +    +A ++      + ++ + E   +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDAEMAELMATTRDYFVLAPDAEAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PARLVHLRNIGFNRLSLGVQDFDPVVQQAINRIQPLAMTADLMSAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHG 247
           L   + ++ G
Sbjct: 279 LAIDMLTSAG 288


>gi|326775262|ref|ZP_08234527.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326655595|gb|EGE40441.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 461

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 12/248 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R   G   P
Sbjct: 43  AAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTTRYLDALERQADSVRDALGDEQP 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K        V +++E +P++   +       
Sbjct: 103 VRFAAAAFGGGTPTFLTAGELERLCDTAEKRMGADLGAVPLSVETSPATATADRLAVLAD 162

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  RIS+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 163 RGTTRISIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNIDLIYGIDGQTERS 222

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVD-----LYNLT 239
           W   L  AL++  + L LY L +   T  +++     G      E+ A D     LY + 
Sbjct: 223 WLASLDAALAWRPEELYLYPLYVRPLTGLHRLGPAATGPKARAREDAAWDEQRLRLYAVG 282

Query: 240 QSITSAHG 247
           +    AHG
Sbjct: 283 RDHLLAHG 290


>gi|222148496|ref|YP_002549453.1| coproporphyrinogen III oxidase [Agrobacterium vitis S4]
 gi|221735482|gb|ACM36445.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           vitis S4]
          Length = 450

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/352 (20%), Positives = 159/352 (45%), Gaps = 24/352 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           ++ GQG  ++ +Y+H P+C + C +C  ++ H  +Y+     ++ +   E++   +  G 
Sbjct: 40  SLLGQG-QTISLYIHIPYCDRLCWFCACHTKHTLKYE-PITAYLTALFREVENTARFVGR 97

Query: 69  RSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            ++ +++  GGG+P+++ PQ++  ++D +  N+T + + EI++E +P+ ++   +     
Sbjct: 98  EAVVTAVHLGGGSPTMLRPQDMVALIDRLRANFTFADDAEISVEMDPNDLDEARYDALAS 157

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            G+ R SLGVQ  +    + + R     +  + +   R      ++ D++Y LP QT+  
Sbjct: 158 IGLTRASLGVQDFDPVVQKAINRLQTFEQTKSVVEQVRLRGATSVNCDILYGLPYQTLES 217

Query: 187 WEMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            E  +   +S   D ++L+       ++K           D+V+  E +      L ++ 
Sbjct: 218 LEKTVLDIVSLKPDRIALFGYAHVPWMKKHQTLIPESALPDIVMRYEQMVRASAMLVEAG 277

Query: 243 TSAHGLHAYEISNHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAI 295
             A G+  + +   S   A     L  N+  Y        IG+G  + S++  G      
Sbjct: 278 YDAIGIDHFALPEDSLAVAARQKRLRRNFQGYTTDGADALIGLGASSISQLPQG------ 331

Query: 296 SIEKHPES--WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
            ++  P +  + ++V +NG A      LS + +    ++  +    G S  D
Sbjct: 332 YVQNMPATGEYQRLVSENGLAATRGIALSGDDRVRAAVIEQIMCEFGFSFAD 383


>gi|332830587|gb|EGK03201.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 455

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 4/231 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
           + VY+H PFC   C YC  NS + R       +I +   E++ +  L    R IS I +G
Sbjct: 49  ISVYIHIPFCYHMCFYCGCNSQLLRDNDIVLKYIDALKKEIRMVLPLLDRNRKISQIHYG 108

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+      +  + + I   +    N EI IE +P   +   +     AG NRISLGV
Sbjct: 109 GGTPTSQPVSVLKELNELILSEFDCIENPEIAIECHPGYADEGYWNELVDAGFNRISLGV 168

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q  +E+ L+   R          + + RN    ++ D IY LP QT   +   + RA+S 
Sbjct: 169 QDFDEEVLKASNRKAPRMAMEDVVRILRNRNVSLNMDFIYGLPLQTPESFTKTINRAISL 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHG 247
             D +  +  +        ++ K+ + V LPS  +   LY   + + +  G
Sbjct: 229 RPDRIVTF--SYAHVPWVNELQKNLEKVGLPSVEIKSQLYTTAKKLLTDAG 277


>gi|258622568|ref|ZP_05717590.1| hutW protein [Vibrio mimicus VM573]
 gi|258585268|gb|EEW09995.1| hutW protein [Vibrio mimicus VM573]
          Length = 468

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 79  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALMEELKQKAALPWTQTGVFHAVYIGG 137

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 138 GTPTELSPQQIRQLGRAIRHSFPLTADCEITLEGRINRFSDKMFDQALEGGFNRFSFGVQ 197

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    I  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 198 SFNTQVRRRAKRLDDREVVIERIAALAATQQAPIVIDLLYGLPYQTSQVFEQDLQDFMDT 257

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 258 GAQGIDLYQLMVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPVSV-NH 316


>gi|85710373|ref|ZP_01041438.1| putative coproporphyrinogen oxidase III [Erythrobacter sp. NAP1]
 gi|85689083|gb|EAQ29087.1| putative coproporphyrinogen oxidase III [Erythrobacter sp. NAP1]
          Length = 436

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 9/198 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           G+ S  + +Y+H PFC K C YC  N+    RR +V   +++ +   E++ +  L  PR 
Sbjct: 38  GEASGDISLYLHIPFCEKICFYCGCNTGAAGRRQRVA--SYLAALHAEIETVATLL-PRD 94

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +  + FGGG+P+ IEP     ++D + +N+ +    E +IE +P S++    +   +A
Sbjct: 95  ARVRRVAFGGGSPNAIEPAEFIDLVDALHRNFWL-DKTEWSIELDPRSMDSVWGEAIAEA 153

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GV R S+GVQ+      + +GR  +      +I   R+     ++FDL+Y LP QT    
Sbjct: 154 GVTRASMGVQTFAAHCQQAIGRVQDDQMICRSIDWLRSAGVTSLNFDLMYGLPGQTREDL 213

Query: 188 EMELQRALSYAVDHLSLY 205
            + L        D ++++
Sbjct: 214 AVSLSYTALLGADRIAVF 231


>gi|39934736|ref|NP_947012.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris CGA009]
 gi|192290258|ref|YP_001990863.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris TIE-1]
 gi|39648586|emb|CAE27107.1| putative coproporphyrinogen oxidase III [Rhodopseudomonas palustris
           CGA009]
 gi|192284007|gb|ACF00388.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 449

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
              + +Y+H PFC + C YC  N  +        ++++  + E+  +   L G   +  +
Sbjct: 44  DEPVSLYLHVPFCKQMCWYCGCNMKLAAKYDPVADYVEHLIDEIDLVADALPGTMPVRHL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP++I+PQ++  ++  + + +    + EI IE++P ++  +      + G  R S
Sbjct: 104 HFGGGTPTVIDPQDLGALMTLLRERFEFLPDAEIAIESDPRTLTEDMAAKIGELGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+ L ++    R++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQEAINRVQPPEMVARAMQLFKSAGVERINFDLIYGLPYQTAEDLRRTVEQ 223

Query: 194 ALSYAVDHLSLY 205
            +    D ++L+
Sbjct: 224 CVEMKPDRVALF 235


>gi|254785994|ref|YP_003073423.1| coproporphyrinogen III oxidase [Teredinibacter turnerae T7901]
 gi|237683709|gb|ACR10973.1| oxygen-independent coproporphyrinogen III oxidase [Teredinibacter
           turnerae T7901]
          Length = 471

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 4/198 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           +   S  L +Y H PFC   C YC  N  +   K     ++++   E+      +   R 
Sbjct: 50  SNSASAPLSLYFHIPFCDTVCYYCACNKIITANKKLAIPYVEALKKEIDMQAIYIDRSRP 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +  + +GGGTP+ +  + +  ++     A N   + + E +IE +P  V        R  
Sbjct: 110 VDQLHWGGGTPTYLTDEQMHDLMAHTRSAFNLLGNDSGEYSIEIHPKGVSPERLTKLRAL 169

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S+GVQ  +E     + R ++  E +A +  AR + F  +S DLIY LP QT   +
Sbjct: 170 GFNRLSMGVQDFDENVQVAVNRFNSEEEVLALVQAARALDFKSISLDLIYGLPLQTSASF 229

Query: 188 EMELQRALSYAVDHLSLY 205
              L+R L+   D LS++
Sbjct: 230 AKTLERVLALKPDRLSVF 247


>gi|229517671|ref|ZP_04407116.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae RC9]
 gi|229345707|gb|EEO10680.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae RC9]
          Length = 455

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAICESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 303


>gi|282866088|ref|ZP_06275136.1| Coproporphyrinogen dehydrogenase [Streptomyces sp. ACTE]
 gi|282559127|gb|EFB64681.1| Coproporphyrinogen dehydrogenase [Streptomyces sp. ACTE]
          Length = 448

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/399 (22%), Positives = 156/399 (39%), Gaps = 30/399 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISS 73
           ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R   G   P   ++
Sbjct: 43  DALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDEEPVRFAA 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             FGGGTP+ +    +  + D   K        V +++E +PS+   +        G  R
Sbjct: 103 AAFGGGTPTFLTAGELERLCDITEKRMGADLRAVPLSVETSPSTATADRLAVLADRGATR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS  +   R   R  + SE   A+   R+   P ++ DLIY +  QT   W   L
Sbjct: 163 VSIGVQSFVDAEARAAVRPQHRSEVEDALGRIRDARIPVLNIDLIYGIDGQTEESWRFSL 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHA 250
             AL++  + L LY L +   T   +     D    + +   + LY   +    AHG   
Sbjct: 223 DAALAWRPEELYLYPLYVRPLTGLGRHRTAADAPDHAWDEQRLRLYRAGRDHLLAHGYEQ 282

Query: 251 YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
             +      G       +Y    D  IG+G GA S      +    ++E      ++ +R
Sbjct: 283 VSMRMFRRAGVPQAGPEDYACQTDGMIGLGCGARSYTSSLHYSFDYAVE------MREIR 336

Query: 310 K--NGHAVVEK-------EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              +G    E         +++ ++     L+  L   EG+   D+    G +   +   
Sbjct: 337 GIIDGFTATEDFSRAEVGRYVTGDEARRRHLLQSLLQAEGLVSADYRERFGTDPRADFPS 396

Query: 361 NLQRQGFIER------VQFSRLRCTQRGMTMLDSVIANL 393
            L R  F ER          RLR +  G+   D++   L
Sbjct: 397 ELDR--FAERGWLDGSADPGRLRLSPEGLAHSDALGPEL 433


>gi|283956390|ref|ZP_06373870.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|283792110|gb|EFC30899.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 1336]
          Length = 451

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+       QN+ L +  I +N+  S + EI+ E +P  +         + G NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSIFRNF--SKDAEISCEIDPRFLNDEQATVLTQNGFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++L R+     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    ++  S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCENFLSKNG 276


>gi|188997369|ref|YP_001931620.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932436|gb|ACD67066.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 462

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 3/199 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--R 69
           + +    L +Y H PFC   C +C  N  + R K   + ++     EM   + L     R
Sbjct: 50  SNERKTPLSLYFHIPFCENACHFCGCNVIITRRKEVVKPYLDHIYKEMDLYKTLIDANNR 109

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  + +GGGTP+ +  +    + D I K + +    EI+IE +P  V+ +     RK G
Sbjct: 110 KVVQLHWGGGTPNYLSDEETVELFDEIKKRFQIDEKAEISIEIDPRHVDRDRIFLLRKIG 169

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR S G+Q    +  + + R       +  +   R   F  ++ DLIY LP QT+  + 
Sbjct: 170 FNRASFGIQDFNPKVQQAVNRIQPEEMILNVMKWFREAGFESVNIDLIYGLPYQTLETFS 229

Query: 189 MELQRALSYAVDHLSLYQL 207
             + + +    D ++++  
Sbjct: 230 DTIDKTIKLNPDRIAVFNF 248


>gi|317403266|gb|EFV83784.1| oxygen-independent coproporphyrinogen III oxidase [Achromobacter
           xylosoxidans C54]
          Length = 475

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 2/206 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A         +  L +YVH PFC   C YC  N  + R+      ++ +   E+  
Sbjct: 53  EYRQALRQRREACTNEPLSLYVHIPFCDSVCYYCACNKVITRHHDRAARYLDALAREIAL 112

Query: 62  -MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +L     +S + FGGGTP+ +  + +  ++  +   +    + EI+IE +P +    
Sbjct: 113 HVAELGAGMPVSQLHFGGGTPTFLSDEELDRLMADLRGAFRFEPDAEISIEVDPRTATPQ 172

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R+ G NR+S GVQ  + +    + R  +  +    +  AR + +  ++ DLIY L
Sbjct: 173 RLEKLRRLGFNRLSFGVQDFDARVQVAVHRVQSFEDVRDLMQSARALDYASINVDLIYGL 232

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT   +   + +  +   D ++LY
Sbjct: 233 PLQTAESFARTIAQVSALRPDRIALY 258


>gi|289627938|ref|ZP_06460892.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647332|ref|ZP_06478675.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330866480|gb|EGH01189.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 460

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + +     + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVITKDHGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++ +    + E  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHAELRQLMAQLRAHFNLLEDDSGEYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|186684691|ref|YP_001867887.1| coproporphyrinogen III oxidase [Nostoc punctiforme PCC 73102]
 gi|186467143|gb|ACC82944.1| oxygen-independent coproporphyrinogen III oxidase [Nostoc
           punctiforme PCC 73102]
          Length = 460

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 2/198 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + Q    L +Y H PFC   C +C  N+ +   K   + +++S + +++    L  P R 
Sbjct: 50  SNQRQTPLSLYFHIPFCQSACYFCGCNTVISNNKNIAKPYVESLVQDIKNTAALIDPDRK 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  I +GGGTP+ ++   +  +   I + + +    EI+IE NP  ++ N     R+ G 
Sbjct: 110 VLQIHWGGGTPNYLDHHQVEFLWKNINRYFNIDPQAEISIEINPRYIDKNYIFFLREIGF 169

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+Q    Q    + R          +   +   F  ++ DLIY LP QT   ++ 
Sbjct: 170 NRISFGIQDFNSQVQVAVNRVQPEEMLFDVMSWVKEAKFESVNVDLIYGLPYQTRETFQE 229

Query: 190 ELQRALSYAVDHLSLYQL 207
            +++ +    D + ++  
Sbjct: 230 TVKKTIELDPDRIVVFNF 247


>gi|189349628|ref|YP_001945256.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|189333650|dbj|BAG42720.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
          Length = 463

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 13/243 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP---- 68
           G  S+ L +Y H PFC   C YC  N    R         + +L +++    L       
Sbjct: 51  GASSSELSLYFHIPFCNTACFYCGCN----RIATNNHRRARPYLDQLKREIALQATLFDR 106

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGY 125
            R+++ + +GGGTP+ +     A ++    +++ ++  ++ E +IE +P +V        
Sbjct: 107 SRAVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVTPATLVHL 166

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+SLGVQ  + +    + R    ++    +  AR   F   S DLIY LP QT+
Sbjct: 167 RTIGFNRLSLGVQDFDPEVQCAINRIQPLAQTADLLRAARTTGFHSTSVDLIYGLPHQTV 226

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+  +  A D LS++        LF    +  D  LP     + L  L   + +
Sbjct: 227 ATFARTLETIIELAPDRLSVFGYA-HMPHLFKMQRRIDDATLPPPETRIALLGLAIDMLT 285

Query: 245 AHG 247
           + G
Sbjct: 286 SAG 288


>gi|167837568|ref|ZP_02464451.1| coproporphyrinogen III oxidase [Burkholderia thailandensis MSMB43]
          Length = 464

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++      +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAEATELMAATRDYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +S DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSISIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|150378221|ref|YP_001314816.1| coproporphyrinogen III oxidase [Sinorhizobium medicae WSM419]
 gi|150032768|gb|ABR64883.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           medicae WSM419]
          Length = 450

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ + +      +++     E++ +   T  P SI  + FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITQRDQPILDYLDMLREEVRLVSAKTRAPISIDHVHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++++P     ++  + + +  +S  EI +E +P ++E        +AGV R SLGVQS
Sbjct: 110 TPTVMQPAEFRALVALLRERFEFASTTEIAVEIDPRTLEPEMATALGEAGVRRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +    + + R  +  + + A+  L ++    ++FDLIY LP QT+       + A+   
Sbjct: 170 FDPVVQKAINRIQSEKQTMEAVSRLRQSGVGSINFDLIYGLPHQTVESCIATAEAAIRMG 229

Query: 199 VDHLSLY 205
            +  +++
Sbjct: 230 PERFAVF 236


>gi|152996256|ref|YP_001341091.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas sp.
           MWYL1]
 gi|150837180|gb|ABR71156.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas sp.
           MWYL1]
          Length = 456

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 7/244 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMR-QLT 66
           + M       L +Y H PFC   C YC  N  V ++Y  G E +++    EM+     L 
Sbjct: 38  DKMLTPSEAPLSLYFHIPFCAHLCYYCACNKIVTKQYDKGAE-YVELLGEEMRLRSLMLD 96

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQG 124
             R ++ + FGGGTP+ +  + I ++ + I +++ + ++   + +IE +P  +  +  + 
Sbjct: 97  HSRQVTQLHFGGGTPTFLTEELIEVLFENIQQHFNLINDGTQDYSIEIDPREISRSKLEL 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
             K G+NRIS+GVQ  + +    + R          +  AR +    ++FDLIY LP Q+
Sbjct: 157 LTKKGINRISIGVQDFDIKVQEAIHRVQPVQMVTELVTDARELGIKSINFDLIYGLPYQS 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L + ++ + + +SL+         F    +  D  LP  ++ +DL  ++    
Sbjct: 217 IEGFRETLAQVIALSPERISLFNYA-HLPDRFRAQRRISDDSLPISSMKLDLLKMSIEYL 275

Query: 244 SAHG 247
            A G
Sbjct: 276 IAAG 279


>gi|157164719|ref|YP_001466528.1| coproporphyrinogen III oxidase [Campylobacter concisus 13826]
 gi|112800657|gb|EAT98001.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           concisus 13826]
          Length = 453

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 30/349 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           L +Y+H PFC   C +C  N         +E +I+    E++ + R L     +  + FG
Sbjct: 48  LSLYLHLPFCRSACYFCGCNVIYTSKDDRKEKYIRYIEKELEILARHLDTSTEVLQMHFG 107

Query: 78  GGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+      +  I+  I AK    S   EI+ E +P  +           G NRIS G
Sbjct: 108 GGTPTFYNAAQLDEIIKLIKAKFKNFSKEAEISCEIDPRFLTNEQLDVLISHGFNRISYG 167

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  +E+  + + R         A+ +AR      ++ DLIY LP Q++  ++  L+ AL
Sbjct: 168 VQDFDEKVQKEIHRIQPYEITQNAVKMARQKGIKSINMDLIYGLPYQSLESFKKTLELAL 227

Query: 196 SYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH----- 246
           +   D L+++       I+K      M K  +  LP+  V +++   T    + +     
Sbjct: 228 TLDPDRLAVFNYAHVPWIKKS-----MRKFDETTLPNPEVKLEILKFTAEFLTKNGYKMI 282

Query: 247 GLHAYEISNHSFLGA---ESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
           G+  +   N    GA    +LH  N+  Y      D IGIG  +    K    R      
Sbjct: 283 GMDHFAKPNDELFGALANGTLHR-NFQGYTTKGGADLIGIGITSIGECK----RHYAQNH 337

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           K  + + K +        +  +LS E    + ++M L    G+++K  E
Sbjct: 338 KDMDEYEKAIDSGKLPYAKGIYLSDEDLLRKSVIMSLMSNFGLNIKAVE 386


>gi|237756637|ref|ZP_04585149.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691202|gb|EEP60298.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 462

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 23/209 (11%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           + +    L +Y H PFC   C +C  N  + R K   + ++     EM   + L     R
Sbjct: 50  SNERKTPLSLYFHIPFCENACHFCGCNVIITRRKEVVKPYLDHLYKEMDLYKTLIDVNNR 109

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++  + +GGGTP+ +  +    + D I K + +    EI+IE +P  V+ +     RK G
Sbjct: 110 NVVQLHWGGGTPNYLSDEETVELFDEIKKRFQIDEKAEISIEIDPRHVDRDRIFLLRKVG 169

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-----------SFDLIYA 178
            NR S G+Q            N    EA+  I     IF  M           + DLIY 
Sbjct: 170 FNRASFGIQDF----------NPKVQEAVNRIQPEEMIFNVMKWFREAGFESVNIDLIYG 219

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LP QT+  +   + + +    D ++++  
Sbjct: 220 LPYQTLETFSDTIDKTIKLNPDRIAVFNF 248


>gi|322378527|ref|ZP_08052975.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS1]
 gi|322379761|ref|ZP_08054071.1| coproporphyrinogen III oxidase [Helicobacter suis HS5]
 gi|321147832|gb|EFX42422.1| coproporphyrinogen III oxidase [Helicobacter suis HS5]
 gi|321149041|gb|EFX43493.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS1]
          Length = 465

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C +C  +      +  +E +I     E+  ++Q L   R +  + FG
Sbjct: 60  LSLYFHLPFCKSACYFCACSVIYTNSQAKKERYIIYLQKELDLLKQYLDTKREVVQLHFG 119

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+      + +I+  I   ++  SS  E++ E +P        Q  +  G NR+S G
Sbjct: 120 GGTPTFFNATQLEIIIQSIYSLFSNFSSKAELSCEIDPRHFTFEQMQVLKNQGFNRLSFG 179

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  +    R + R  +       +  AR+     ++FDLIY LP Q++  +E  L + L
Sbjct: 180 IQDFDPVVQRAVNRLQSFELVQEKVQWARDCGIHSINFDLIYGLPFQSIQSFEQTLLKVL 239

Query: 196 SYAVDHLSLY 205
               D L+++
Sbjct: 240 KLDPDRLAVF 249


>gi|153003996|ref|YP_001378321.1| coproporphyrinogen III oxidase [Anaeromyxobacter sp. Fw109-5]
 gi|152027569|gb|ABS25337.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. Fw109-5]
          Length = 460

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
             L +YVH PFC + C +C  N      +   E++++    E++ + ++L   R+++ + 
Sbjct: 50  GPLSIYVHLPFCREMCRFCGCNVIATHDRTRAESYLELLEKEVELVAKRLPRRRTVTQLH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ ++ + +      +A+++  + + E  IE +P+    +  +   + G NRIS+
Sbjct: 110 WGGGTPTFLDERQLEQCHALLARHFDFAKDGEKAIEIDPAITTRSQIETLARLGFNRISM 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +      +GR     E    +  AR+  F  ++ DLIY LP Q+   W+  L   
Sbjct: 170 GVQDFDPHVQETVGRIQGVKETAELVQAARDAGFHGVNLDLIYGLPFQSRDTWQKTLDLI 229

Query: 195 LSYAVDHLSLY 205
           L    D L+++
Sbjct: 230 LQIHPDRLAVF 240


>gi|292669404|ref|ZP_06602830.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           noxia ATCC 43541]
 gi|292648965|gb|EFF66937.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           noxia ATCC 43541]
          Length = 503

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 17/289 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSIS 72
              ++ +YV  PFC+ +C YC F S++   +     F+     ++    +   T   ++ 
Sbjct: 169 AERTVSIYVGIPFCLSRCLYCSFPSNLLPGREKLRTFMDVLARDLSVAAEDVRTLGLTVE 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           SI+ GGGTP+ +     A +L  +   +   S  E T+EA  P S+        +   V 
Sbjct: 229 SIYIGGGTPTSLPNDFFAEMLKMVYNAFYGLSVAEFTVEAGRPDSMSAEKIACMKSYAVT 288

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+S+  QS+  ++L  +GR+H   + +  +   R  F   ++ D+I  LP +T       
Sbjct: 289 RVSVNPQSMRGETLVRIGRHHTPEDIVRMVREIRAAFDVHINMDVILGLPGETAEDVRAT 348

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +    + A D ++L+ L +++G+      +   + LPS+   + +           G   
Sbjct: 349 MAAVTALAPDDITLHALALKRGSNLRLRMETEHIELPSDAETMRMSETAVRAVEEAGYRP 408

Query: 251 YEISNHSFL------------GAESLHNLNYWRYGDYI-GIGPGAHSRV 286
           Y +    ++            GAES++N+        I GIG  A ++V
Sbjct: 409 YYLYRQGYMSGDLENVGYARPGAESIYNIQIMEERQTIVGIGGAAATKV 457


>gi|89890241|ref|ZP_01201751.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BBFL7]
 gi|89517156|gb|EAS19813.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BBFL7]
          Length = 460

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           + +Y+H PFC   C +C  N  +      ++ +I + L E   ++  L     IS +  G
Sbjct: 57  ISLYIHLPFCEAMCTFCGCNKRITLNHHVEQPYISNVLKEWSLYLALLDETPVISELHLG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P N+ L++DGI K+   + N  ++ E +P++    + +   + G NR+S GV
Sbjct: 117 GGTPTFFSPANLKLLVDGIFKSADKAKNAALSFEGHPNNTTKEHLKTLFELGFNRVSYGV 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q    +  + + R       + A   AR I +  +  DLIY LP Q        +++ ++
Sbjct: 177 QDYNLEVQKAIHRVQPFENVLNATLNAREIGYKSVGHDLIYGLPFQKKEHVIHTIKQTIA 236

Query: 197 YAVDHLSLY 205
              D ++ Y
Sbjct: 237 LKPDRIAFY 245


>gi|90425297|ref|YP_533667.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB18]
 gi|90107311|gb|ABD89348.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB18]
          Length = 449

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
              + +Y+H PFC + C YC  N  +         ++Q  L E+  +   + G   +  +
Sbjct: 44  DEPISLYLHVPFCKQMCWYCGCNMKLASRYEPVATYLQHLLDEIDLLANAMPGRMPVGHV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++EP ++  ++  IA  + +    EI IE++P ++  +        G  R S
Sbjct: 104 HFGGGTPTVLEPDDLGAVMALIADRFRLIEGAEIAIESDPRTLTDDMVDKIGAIGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+   R +   +++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQAAINRIQPPEMVKHAMDRFRAVGVKKLNFDLIYGLPYQTAEDLRRTVEQ 223

Query: 194 ALSYAVDHLSLY 205
            +    D ++L+
Sbjct: 224 CVEMRPDRVALF 235


>gi|303236362|ref|ZP_07322952.1| coproporphyrinogen dehydrogenase [Prevotella disiens FB035-09AN]
 gi|302483420|gb|EFL46425.1| coproporphyrinogen dehydrogenase [Prevotella disiens FB035-09AN]
          Length = 455

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +LSA E +   +    +  Y+H P+C   C YC  NS+        + ++ +   E+  +
Sbjct: 33  FLSAIERSNHDKHQPLVSFYLHIPYCRHLCHYCGCNSYAMMNSELVKQYVDALHREIDLV 92

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +L G R IS I +GGG+P+ I    I  + D +     +    EI IE +P  + + +
Sbjct: 93  AARLDGNRKISQIHYGGGSPTAIPINYIKELNDHLLSLMPIIDKPEIAIECHPGYLTIED 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           ++   + G  R SLG+Q  +E+ L+ + R  +       + L R     ++ DL+Y LP 
Sbjct: 153 WEQLVQCGFTRYSLGIQDFDERVLKAVNRRPSLLPVGEIVSLLRESGASINMDLLYGLPY 212

Query: 182 QTMTQWEMELQRALSYAVDHL 202
           QT   +E   ++A +   D L
Sbjct: 213 QTPLSFEKTAEQAANLRPDRL 233


>gi|330899463|gb|EGH30882.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330976029|gb|EGH76095.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 460

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + + 
Sbjct: 49  KASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G 
Sbjct: 109 QLHLGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPTQNPQTFSH 228

Query: 190 ELQRALSYAVDHLSLY 205
            + + +    D LS++
Sbjct: 229 TVDKVIDLQPDRLSVF 244


>gi|326791624|ref|YP_004309445.1| coproporphyrinogen dehydrogenase [Clostridium lentocellum DSM 5427]
 gi|326542388|gb|ADZ84247.1| Coproporphyrinogen dehydrogenase [Clostridium lentocellum DSM 5427]
          Length = 480

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 102/199 (51%), Gaps = 3/199 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            + +Y+  PFC  +C YC F ++ + + +   E ++++   E+ ++ +      I S++ 
Sbjct: 155 EISLYIGIPFCPTRCVYCSFTAYSLEKCEAQVEPYLEALFKEITFVAEAKKGVPIRSLYI 214

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+ +    +  +L+ +  ++ +S   E TIEA  P ++  +  +  ++ GV RIS+
Sbjct: 215 GGGTPTSLNEDQLLCLLEHVKSSFDLSEVEEYTIEAGRPDTITKDKLRIMKEQGVGRISI 274

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
             QS+ +++L  +GR H   +       AR +    ++ D+I  LP +T+      L   
Sbjct: 275 NPQSMNQKTLDTIGRRHGVEDIKRVFAEARALGHDCINMDMILGLPGETVADVAYTLDEL 334

Query: 195 LSYAVDHLSLYQLTIEKGT 213
                ++++++ + I++ +
Sbjct: 335 EKLGPENITVHTMAIKRAS 353


>gi|83652585|gb|ABC36648.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           thailandensis E264]
          Length = 501

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 89  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 148

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 149 TQLHWGGGTPTFLSQAETTELMAATREYFTLASDRTGEFSIEIDPRAASPATLVHLRTIG 208

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 209 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 268

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 269 RTLDTVVELEPDRLSVF 285


>gi|159184833|ref|NP_354594.2| coproporphyrinogen III oxidase [Agrobacterium tumefaciens str. C58]
 gi|159140117|gb|AAK87379.2| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           tumefaciens str. C58]
          Length = 449

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 110/193 (56%), Gaps = 6/193 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           N + +Y+H P+C + C +C  ++ H  +Y+     ++++   E+  +  L  P ++ S++
Sbjct: 45  NRISLYLHIPYCDRLCWFCACHTKHTLKYE-PIAVYLEALKQEIAAVGALVSPDAVVSAV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P++++P ++  ++D + +++T   + EI++E +P+ ++ + +      G++R S
Sbjct: 104 HFGGGSPTMLKPDDMVSLMDCLRRHFTFGLDPEISVEMDPNDLDDSRYDALAAVGMSRAS 163

Query: 135 LGVQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           LGVQ  +++  + + R  +   ++++     AR +   ++ D++Y LP QT    +  + 
Sbjct: 164 LGVQDFDDKVQKTINRIQSFQQTKSVVDAVRARGVH-SVNCDILYGLPFQTCETLKKTVG 222

Query: 193 RALSYAVDHLSLY 205
           + +S   D ++L+
Sbjct: 223 QIVSLNPDRVALF 235


>gi|319778810|ref|YP_004129723.1| Coproporphyrinogen III oxidase, oxygen-independent [Taylorella
           equigenitalis MCE9]
 gi|317108834|gb|ADU91580.1| Coproporphyrinogen III oxidase, oxygen-independent [Taylorella
           equigenitalis MCE9]
          Length = 454

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           + +Y+H PFC + C +C  +  + +    ++ +I++ L E   ++       +I  I  G
Sbjct: 51  ISIYIHLPFCEQLCTFCACHKRITKKHTVEDTYIEAVLCEWGLYLDLFDEVVNIKEIHLG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+   PQN+  +++G+ +     V+     + E +P++  V + +     G  R S 
Sbjct: 111 GGTPTFFSPQNLRKLIEGLFEGGRAVVAPGHSFSFEGHPNNTTVEHLKTLYDLGFRRASF 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    + + R     + +   + AR I F  +S DL++ LP Q   + E+ +++ 
Sbjct: 171 GVQDYDPIVQKAINRKQLYDDVVQITNAAREIGFESISHDLVFGLPFQNWERMELTIRKT 230

Query: 195 LSYAVDHLSLY 205
           +    D L+ Y
Sbjct: 231 IDLKPDRLAFY 241


>gi|114571187|ref|YP_757867.1| coproporphyrinogen III oxidase, anaerobic [Maricaulis maris MCS10]
 gi|114341649|gb|ABI66929.1| coproporphyrinogen III oxidase, anaerobic [Maricaulis maris MCS10]
          Length = 441

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 3/186 (1%)

Query: 4   LSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L+ ++  MT Q  N +L +YVH PFC   C YC  ++ +       E+++ +   +++  
Sbjct: 35  LADWQRWMTQQDKNPALSIYVHIPFCKSMCWYCGCHTTIPNAHRRVEHYLAALDIDIRRR 94

Query: 63  RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +   P   +  I FGGG+P +++P+    ++  I  ++ V+ + EI +E +P  ++   
Sbjct: 95  AESAPPDGRVCHIHFGGGSPDMLKPEEFRAVMQQIRASFNVAPDAEIAVELDPRGLDSEL 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            Q   + GVNR SLGVQ +  +  + + R        AA    R +    ++ D++Y LP
Sbjct: 155 CQAMAQTGVNRASLGVQDISHEVQKLIHRIQPLEIVQAAADKLRAVGISAINMDMMYGLP 214

Query: 181 KQTMTQ 186
            Q++ +
Sbjct: 215 AQSVAR 220


>gi|227500695|ref|ZP_03930744.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217282|gb|EEI82626.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
          Length = 431

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 109/205 (53%), Gaps = 10/205 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +  VY++ PFC  +C YC + + V + +  ++ +I S + E+   + +  PR I +I+ G
Sbjct: 124 AFSVYINIPFCPTRCHYCSYPTLVGK-RNDKKAYIDSLIYEI---KNIDLPRKIDAIYVG 179

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPS I+ +++A +L  I + +T     E T EA    S++ +  Q  ++  V+RISL 
Sbjct: 180 GGTPSYIDHEDLARLLVAINEKFTYE---EFTFEAGREDSLDFDKLQILKEGKVDRISLN 236

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS  E+ +R  GRN++  E    I+L AR +   ++ D I  L  +    +E       
Sbjct: 237 PQSFNEEIVRKAGRNYDY-EHFEKIYLRARQLGFIINTDFIVGLMGEGSELFEKNFTVLK 295

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
               D+++ + L ++ G+ +++ +K
Sbjct: 296 KLKPDNITFHALAMKVGSKYFEENK 320


>gi|262173432|ref|ZP_06041109.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
 gi|261890790|gb|EEY36777.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
          Length = 453

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDVYFAALMEELKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 123 GTPTELSPQQIRQLGRAIRHSFPLTADCEITLEGRINRFSDEMFDQALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    I  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVIERIAALAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMDT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 243 GAQGIDLYQLMVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVKFMAKHHLRPVSV-NH 301


>gi|258627642|ref|ZP_05722418.1| hutW protein [Vibrio mimicus VM603]
 gi|258580085|gb|EEW05058.1| hutW protein [Vibrio mimicus VM603]
          Length = 453

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALMEELKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 123 GTPTELSPQQIRQLGRTIRHSFPLTADCEITLEGRINRFSDKMFDQALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    I  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVIERIAALAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMDT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 243 GAQGIDLYQLMVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPVSV-NH 301


>gi|119510986|ref|ZP_01630107.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
 gi|119464331|gb|EAW45247.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
          Length = 460

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 6/182 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           L +Y H PFC   C +C  N+ + + K   + +++  + E++ M R +   R +  I +G
Sbjct: 57  LSLYFHIPFCESACYFCGCNTVISQNKNIAKPYLEHLVREIKNMARLIDSDRKVLQIHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  +   I +N+ +    EI+IE NP+ V+       R+ G NRIS G+
Sbjct: 117 GGTPNYLNQDQVKFLWKHITENFNIDPQAEISIEINPAYVDQEYIYFLREVGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q    Q    + R        + +  I  A+  F  ++ DLIY LP QT+  ++  + + 
Sbjct: 177 QDFNPQVQLAVNRLQPEELLFDVMTWIKAAK--FDSVNVDLIYGLPYQTLQTFQETVNKT 234

Query: 195 LS 196
           ++
Sbjct: 235 IA 236


>gi|196230554|ref|ZP_03129416.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
 gi|196225484|gb|EDY19992.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
          Length = 478

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 5/206 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y H PFC   C +C +   +   +     ++ +   E+ W+   T    ++ +F 
Sbjct: 61  GPIGIYAHIPFCNYACSFCFYAKRIGETRETMARYVDALEKELAWIPPGT---PLTQLFV 117

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P+ +   L  I ++  V   +  T+E +P S+   +     +  + R+S+G
Sbjct: 118 GGGTPTALPPELLDRTLTAIFRH-VVRGPITHTVECSPDSLTDAHIDVLLRHQIGRVSMG 176

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  ++ L  + R H    A+A      +    ++ DLIY LP QT   +  +LQ   +
Sbjct: 177 IQSTHDEVLDHIRRKHAGEVALATCAKLVSCGLMVNVDLIYGLPGQTEEHFRRDLQLVSA 236

Query: 197 YAVDHLSLYQLTI-EKGTLFYKMHKD 221
                ++ Y L + E+  +  K+ +D
Sbjct: 237 SGAHSITAYNLRVNERTPVAQKLGED 262


>gi|323496777|ref|ZP_08101822.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
 gi|323318202|gb|EGA71168.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
          Length = 457

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 115/251 (45%), Gaps = 6/251 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTG 67
           +  GQ S    +Y+H PFC  +C +C+F  +    K+  +++ ++ + E+  +  +  T 
Sbjct: 53  DQQGQKSAKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDDYFEALMIEIAQKAAQPWTQ 111

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                +++ GGGTP+ +  + +  +   I +++ +S++ EIT+E   +      F+   +
Sbjct: 112 TGLFHAVYIGGGTPTDLSAEQVERLGKAIRRSFPLSTDCEITLEGRINRFSDEMFERSLE 171

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQ 186
            G NR S G+QS   +  R   R  +  + +A +  L+      +  DL+Y LP QT   
Sbjct: 172 GGFNRYSFGIQSFNTKVRRSAKRLDDREDVMARVASLSATQQAPIIVDLLYGLPYQTEEV 231

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSA 245
           +E +L   ++     L LYQL +        M + G +  P+       +Y +     + 
Sbjct: 232 FEQDLNDFMATGAHGLDLYQLVVGGSAPMINMVEKGRIPAPATTAEKAAMYKIGSDFMAK 291

Query: 246 HGLHAYEISNH 256
           H L    + NH
Sbjct: 292 HHLTQLSV-NH 301


>gi|161723176|ref|YP_442055.2| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|167618996|ref|ZP_02387627.1| coproporphyrinogen III oxidase [Burkholderia thailandensis Bt4]
 gi|257138237|ref|ZP_05586499.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
          Length = 464

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSQAETTELMAATREYFTLASDRTGEFSIEIDPRAASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTVVELEPDRLSVF 248


>gi|298487799|ref|ZP_07005840.1| Coproporphyrinogen III oxidase, oxygen-independent [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157891|gb|EFH98970.1| Coproporphyrinogen III oxidase, oxygen-independent [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 460

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 54  LSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +   +  +  ++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 114 GGTPTFLSHAELRRFMAQLRAHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTAQAFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|237745920|ref|ZP_04576400.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
 gi|229377271|gb|EEO27362.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
          Length = 450

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 6/274 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIF 75
           L +YVH PFC   C +C F  +  +    +E     ++  +     +R++   R +++I+
Sbjct: 61  LALYVHVPFCHHHCTFCPFYINQTKKNFSKEYSSLLLKEIVDTAYVLREVVDKRPVNAIY 120

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS ++  ++A ++  +   + +S + E+T+E   +       + + +AG NR SL
Sbjct: 121 FGGGTPSDLDQDDMAAVIRALHDCFRISPDAEVTVEGRTTGFTAGKGKAWVEAGANRFSL 180

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-A 194
           GVQS      + LGR  +  E   A++        +  DL+Y LP Q +     +++  +
Sbjct: 181 GVQSANTVLRKKLGRISSREEVGEALNGLCESGASVVIDLMYGLPGQDIPMLLDDIRYIS 240

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               +  L LY+L     +   K    G +  +P  N    ++         +G   +  
Sbjct: 241 EETGIAGLDLYELRCFPDSPLDKAISRGKMPAMPEFNEKARMFGAAYERLYDYGFEHFSP 300

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRV 286
            +      E SL+N    R  D I  G  A  R+
Sbjct: 301 KHWRRNARERSLYNRLAGRQTDMIPFGSAAGGRL 334


>gi|153212367|ref|ZP_01948149.1| hutW protein [Vibrio cholerae 1587]
 gi|229528187|ref|ZP_04417578.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae 12129(1)]
 gi|124116575|gb|EAY35395.1| hutW protein [Vibrio cholerae 1587]
 gi|229334549|gb|EEO00035.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae 12129(1)]
          Length = 455

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLSPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 303


>gi|34494598|emb|CAE46549.1| putative coproporphyrinogen oxidase [Photobacterium damselae subsp.
           piscicida]
          Length = 465

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 6/215 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGG 78
           +YVH PFC  +C YC+F  +    ++  +++  + + E++   Q   T      +++ GG
Sbjct: 76  LYVHIPFCRVRCTYCNFFQYASSQQL-IDDYFAALMIELKLKAQQPWTQSAPFHAVYIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  +   I K++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 135 GTPTDLTAQQVKQLGTMIRKHFPLTTDCELTLEGRINRFSDEMFYSALEGGFNRFSFGVQ 194

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  +  LA      +  DL+Y LP QT+  W+ +L+  ++ 
Sbjct: 195 SFDTQVRRKAKRLDDREVVLDRVAALAATDQAPIVIDLLYGLPYQTLDVWQQDLEDFMAS 254

Query: 198 AVD--HLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
                 + LYQL    GT    +   G L  P++ 
Sbjct: 255 GAHGVGVDLYQLIEMGGTPMKNLIDKGKLPEPADT 289


>gi|255008695|ref|ZP_05280821.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313146431|ref|ZP_07808624.1| oxygen-independent coproporphyrinogen II [Bacteroides fragilis
           3_1_12]
 gi|313135198|gb|EFR52558.1| oxygen-independent coproporphyrinogen II [Bacteroides fragilis
           3_1_12]
          Length = 454

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 23/230 (10%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-Q 60
           +YL A + +       +L  Y+H PFC   C YC  NS+        E+++++   EM Q
Sbjct: 32  RYLEAVQQS-NKVSERALSFYLHIPFCRHLCHYCGCNSYPMARPEVIESYVKALHQEMDQ 90

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD---GIAKNWTVSSNVEITIEANPSSV 117
            +  L   R I+ I +GGG+P+ I    IALI +    +  ++ +    EI IE +P  +
Sbjct: 91  ILPLLDKSRPIAQIHYGGGSPTAIP---IALIKELNAHLLSSFRMIDRPEIAIECHPGYL 147

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN--ASEAIAAIHLARNIFPRMSFDL 175
              ++    + G NR+S+GVQ    + L+ + R  +  A E I A+   R +   ++ D 
Sbjct: 148 SEKDWLQLTECGFNRVSIGVQDFNIEVLKTVNRRPSLVAMEDIFALLRERGV--SINLDF 205

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLY-----------QLTIEKGTL 214
           +Y LPKQT+  +   +++A+S + D L  +           QL +EK  L
Sbjct: 206 LYGLPKQTVESFARSIEQAISLSPDRLVTFSYAHVPWINKRQLILEKSGL 255


>gi|119384588|ref|YP_915644.1| coproporphyrinogen III oxidase [Paracoccus denitrificans PD1222]
 gi|3913822|sp|Q51676|HEMN_PARDP RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1002875|gb|AAC44513.1| ORF1 [Paracoccus denitrificans PD1222]
 gi|119374355|gb|ABL69948.1| oxygen-independent coproporphyrinogen III oxidase [Paracoccus
           denitrificans PD1222]
          Length = 451

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 95/187 (50%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGG 79
           +Y+H PFC + C +C   +   +       + ++ L E+  ++    P   +S + +GGG
Sbjct: 53  LYMHVPFCRRLCWFCACRTQGTQSDEPVRAYAKALLAELDMLKSALAPGVRLSRLHWGGG 112

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+  + + L+   +   + ++   E ++E +P+ ++        +AG+NR S+GVQ 
Sbjct: 113 TPTLMPAEMMRLVAGAVLDAFPLAEGAEFSVEIDPNEIDEARMDALAEAGLNRASIGVQD 172

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  + +GR  +      A+ + R+     ++ D++Y LP Q   +    +Q+ L+ +
Sbjct: 173 FDPEIQKIIGREQSFEVTKRAVDMIRDRGIASLNADILYGLPHQDPHRIAESVQKLLALS 232

Query: 199 VDHLSLY 205
            D ++LY
Sbjct: 233 PDRVALY 239


>gi|167903903|ref|ZP_02491108.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei NCTC
           13177]
          Length = 464

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          I  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLIRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|22255838|gb|AAM94763.1| CalE1 [Micromonospora echinospora]
          Length = 441

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 5/204 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           +  ++L +YVH PFC  +C +C+  +           +++    + + +    G  +  +
Sbjct: 42  EARDALFLYVHVPFCEMRCGFCNLFTRANAPAEQVTGYLRQLRRQAEQVADALGADAGYA 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGV 130
              FGGGTP+ +    +A + D IA   T +    V +++E +P++   +        G 
Sbjct: 102 RAAFGGGTPTYLTADELAELFD-IATTTTGARLPGVPLSVETSPATATPDRLAVLAAHGT 160

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            R+S+GVQS  +   R  GR    +E  AA+   R+   P ++ DLIY +  QT   W  
Sbjct: 161 TRVSIGVQSFLDAEARAAGRPQRRTEVEAALGAIRDARIPVLNIDLIYGIDGQTADTWRE 220

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L  AL++  + L LY L +   T
Sbjct: 221 SLDAALAWRPEELYLYPLYVRPLT 244


>gi|293376702|ref|ZP_06622925.1| radical SAM domain protein [Turicibacter sanguinis PC909]
 gi|325845184|ref|ZP_08168492.1| coproporphyrinogen dehydrogenase HemZ [Turicibacter sp. HGF1]
 gi|292644659|gb|EFF62746.1| radical SAM domain protein [Turicibacter sanguinis PC909]
 gi|325488780|gb|EGC91181.1| coproporphyrinogen dehydrogenase HemZ [Turicibacter sp. HGF1]
          Length = 492

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 11/199 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           N + +Y+  PFC  +C YC F ++ +  +K   E F+++ L E++ +      R   I+S
Sbjct: 164 NEISLYIGIPFCPTRCAYCTFPAYAQEPFKKWIEPFLEALLEEIKLVGAFIKERQLKITS 223

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVN 131
           I+FGGGT + +  +    +L  + ++   +S V EIT+EA  P ++        ++  ++
Sbjct: 224 IYFGGGTATSLTKEQFEKLLITVYEHVANASEVREITVEAGRPDTITPEKLSLLKEYDIH 283

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  + +L  +GR+H   + I    +A+   F  ++ DLI  LP     + E E
Sbjct: 284 RISINPQSFNQATLDSIGRHHTVEDVIDKFKMAKEYDFDNINMDLIVGLPD----EGEKE 339

Query: 191 LQRALSYAVDHLSLYQLTI 209
           L   LS  ++ L    LT+
Sbjct: 340 LAYTLS-QIEELQPESLTV 357


>gi|332288682|ref|YP_004419534.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
 gi|330431578|gb|AEC16637.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
          Length = 463

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 5/204 (2%)

Query: 9   NNMTGQGS---NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           N++ G+ +   NS  +Y H PFC   C +C F     +     + ++ + + E++   ++
Sbjct: 35  NDILGRSNFRINSRALYFHIPFCETICSFCPFTRGAYKDHDIVDKYVNALIKEIEIKSKI 94

Query: 66  TGPRSI--SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
               SI   SIFFGGGTPSL+ P N+  I + I K + +S + E + E    S+  +   
Sbjct: 95  NDYFSIPVKSIFFGGGTPSLLSPDNMIKIGEAIKKYFLLSKDCEFSFEIEIKSLSFDKVA 154

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             ++ GV     G+Q+ +    +         +   A  L    F  + FD++Y +  Q 
Sbjct: 155 AMKEMGVTHPRFGLQTFDSNWRKLFNLTSTYEQINFAADLLNKNFKTVLFDILYGMNGQD 214

Query: 184 MTQWEMELQRALSYAVDHLSLYQL 207
             +   +L++A++    ++ +Y +
Sbjct: 215 EEELIRDLEKAIALGTSNIDIYPI 238


>gi|167580894|ref|ZP_02373768.1| coproporphyrinogen III oxidase [Burkholderia thailandensis TXDOH]
          Length = 464

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSQAETTELMAATREYFTLASDRTGEFSIEIDPRAASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIIELEPDRLSVF 248


>gi|237750436|ref|ZP_04580916.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
 gi|229373966|gb|EEO24357.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
          Length = 459

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C +C  N      +  +E +I+    E+  ++  +   R ++   FG
Sbjct: 54  LSLYTHLPFCKSACYFCGCNVIYTSKEDKKERYIKYLEKELALLKDSMDTKRKVAQFHFG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+  + + +  I   I   +   S + EI+ E +P     +  +  +  G NRIS G
Sbjct: 114 GGTPTFFDAKQLQTITQMIRHTFPNFSESCEISCEIDPRHFSEDQMRVLKDCGFNRISFG 173

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  +++  + + R    S   +++ LAR      ++FDLIY LP Q+   +   L+  +
Sbjct: 174 VQDFDDKVQQHINRIQPFSLVESSVTLARKYGIDSINFDLIYGLPYQSEKSFANTLESVI 233

Query: 196 SYAVDHLSLY 205
             + + L+++
Sbjct: 234 KLSPERLAIF 243


>gi|121586417|ref|ZP_01676205.1| hutW protein [Vibrio cholerae 2740-80]
 gi|147672487|ref|YP_001215169.1| coproporphyrinogen III oxidase [Vibrio cholerae O395]
 gi|153819201|ref|ZP_01971868.1| hutW protein [Vibrio cholerae NCTC 8457]
 gi|227812475|ref|YP_002812485.1| hutW protein [Vibrio cholerae M66-2]
 gi|229505946|ref|ZP_04395455.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae BX 330286]
 gi|262169175|ref|ZP_06036868.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           RC27]
 gi|298499688|ref|ZP_07009494.1| coproporphyrinogen III oxidase [Vibrio cholerae MAK 757]
 gi|121549395|gb|EAX59424.1| hutW protein [Vibrio cholerae 2740-80]
 gi|126510235|gb|EAZ72829.1| hutW protein [Vibrio cholerae NCTC 8457]
 gi|146314870|gb|ABQ19410.1| hutW protein [Vibrio cholerae O395]
 gi|227011617|gb|ACP07828.1| hutW protein [Vibrio cholerae M66-2]
 gi|227015556|gb|ACP11765.1| hutW protein [Vibrio cholerae O395]
 gi|229356297|gb|EEO21215.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae BX 330286]
 gi|262022456|gb|EEY41164.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           RC27]
 gi|297541669|gb|EFH77720.1| coproporphyrinogen III oxidase [Vibrio cholerae MAK 757]
          Length = 455

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 303


>gi|327485889|gb|AEA80295.1| Radical SAM family HutW-like protein [Vibrio cholerae LMA3894-4]
          Length = 453

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 243 GAQGIDLYQLVVGGSAPMLNLVEKGKLSPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 301


>gi|307297877|ref|ZP_07577681.1| Coproporphyrinogen dehydrogenase [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915963|gb|EFN46346.1| Coproporphyrinogen dehydrogenase [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 411

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 23/207 (11%)

Query: 10  NMTGQG----SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQ 64
           N+ G G     +S G+Y+H PFC + C +C +N      K+  ++     +LT ++   +
Sbjct: 19  NVDGSGPMAFDSSPGLYIHVPFCPEFCSFCPYN------KIKYDSKLTNKYLTALKRESE 72

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L      SSI+ GGGTPS     ++ L L G+  ++   ++ EI +E +P+ V     + 
Sbjct: 73  LQRVGQFSSIYIGGGTPSY----DLDL-LKGVVSHFREMTDGEIALEIHPADVSSKRLEE 127

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNAS----EAIAAIHLARNIFPRMSFDLIYALP 180
            R+ GVN +SLG+QS ++ +L  +GR    S     +IAA   A   F  +     Y L 
Sbjct: 128 IRETGVNFVSLGIQSFDDFTLNSMGRRRQDSVVSLNSIAATTSAGFDFVDVDLIFDYQLE 187

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQL 207
           ++ + +   +L+ A+SY  + +S+Y +
Sbjct: 188 RRRIVE---DLETAISYGPEQVSVYPM 211


>gi|153828033|ref|ZP_01980700.1| hutW protein [Vibrio cholerae 623-39]
 gi|148876442|gb|EDL74577.1| hutW protein [Vibrio cholerae 623-39]
          Length = 455

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 303


>gi|15601663|ref|NP_233294.1| coproporphyrinogen III oxidase [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|153823488|ref|ZP_01976155.1| hutW protein [Vibrio cholerae B33]
 gi|229510200|ref|ZP_04399680.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae B33]
 gi|229605478|ref|YP_002876182.1| coproporphyrinogen III oxidase [Vibrio cholerae MJ-1236]
 gi|254850074|ref|ZP_05239424.1| hutW protein [Vibrio cholerae MO10]
 gi|9658344|gb|AAF96806.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|126519002|gb|EAZ76225.1| hutW protein [Vibrio cholerae B33]
 gi|229352645|gb|EEO17585.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae B33]
 gi|229371964|gb|ACQ62386.1| coproporphyrinogen III oxidase oxygen-independent associated with
           heme uptak-like eradical SAM family protein HutW [Vibrio
           cholerae MJ-1236]
 gi|254845779|gb|EET24193.1| hutW protein [Vibrio cholerae MO10]
          Length = 455

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 303


>gi|257452276|ref|ZP_05617575.1| coproporphyrinogen III oxidase [Fusobacterium sp. 3_1_5R]
 gi|257465924|ref|ZP_05630235.1| coproporphyrinogen III oxidase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917080|ref|ZP_07913320.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317058819|ref|ZP_07923304.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684495|gb|EFS21330.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313690955|gb|EFS27790.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 472

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 11/213 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E     +G+++L  YV  PFC  KC YC F S+     VG+  + + F+  ++   + TG
Sbjct: 135 EETFLHRGASNL--YVGIPFCPTKCSYCSFASYEISGGVGR--YYKEFVNTLEKEIRFTG 190

Query: 68  ------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVN 120
                 P+ I S++FGGGTPS +  +++  IL    +    S   E T EA    S+ + 
Sbjct: 191 EQLRKQPQQIESVYFGGGTPSTLTEEDLERILKVFREEIDFSFVREFTFEAGREDSITLK 250

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             +  +K GV+R+SL  Q+ +E++L  + R  N           + +   ++ D I  LP
Sbjct: 251 KLEILKKYGVDRVSLNPQTFQEKTLARVHRKFNRRHFEEVYEDCKRLGFILNMDFILGLP 310

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           ++T       L++   + V++++++ L  ++ +
Sbjct: 311 EETTEDILDTLEQLKQFDVENITIHSLAFKRAS 343


>gi|255746344|ref|ZP_05420291.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholera CIRS 101]
 gi|262158301|ref|ZP_06029418.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
 gi|255736098|gb|EET91496.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholera CIRS 101]
 gi|262029983|gb|EEY48630.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
          Length = 453

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 243 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 301


>gi|209884183|ref|YP_002288040.1| oxygen-independent coproporphyrinogen III oxidase [Oligotropha
           carboxidovorans OM5]
 gi|209872379|gb|ACI92175.1| oxygen-independent coproporphyrinogen III oxidase [Oligotropha
           carboxidovorans OM5]
          Length = 450

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +Y+H PFC   C YC  N+ + R      +++ S   E+  +   +    ++  + FG
Sbjct: 48  VSLYLHIPFCQSMCWYCGCNTTIVRRNEPVADYLTSLRREIDMVTSHIKQKTTVGGVHFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P   A ++  + + ++   + EI IE +P  +          +GV R SLGV
Sbjct: 108 GGTPTIMTPAQFAELMIFLRQKFSFLPDAEIAIEIDPRRLTREMLNELGASGVTRASLGV 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS +    + + R  +  +  A     R+   R ++FDLIY LP QT+      +Q+ L 
Sbjct: 168 QSFDPVVQQAVNRIQSFEDTAAVTEGLRSAGIRSINFDLIYGLPHQTVASCFDTVQKCLQ 227

Query: 197 YAVDHLSLY 205
              D  S++
Sbjct: 228 LHPDRFSVF 236


>gi|254224775|ref|ZP_04918391.1| hutW protein [Vibrio cholerae V51]
 gi|125622838|gb|EAZ51156.1| hutW protein [Vibrio cholerae V51]
          Length = 455

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 303


>gi|306820188|ref|ZP_07453832.1| coproporphyrinogen III oxidase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551789|gb|EFM39736.1| coproporphyrinogen III oxidase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 424

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 174/400 (43%), Gaps = 34/400 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQW 61
           LS++++   G+    + +Y+H PFC  KC YC+  S  +VR    G+  +I++     + 
Sbjct: 28  LSSFKDRFIGK---EMSLYIHVPFCKSKCGYCNLFSITNVRSDDYGE--YIKAVKRHSKQ 82

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVE 118
           MR L      + +S   GGGTP ++ P++++ + +    ++ +      +I E +P  + 
Sbjct: 83  MRSLINFEHTNFNSFTLGGGTPMILSPKDLSSLFELARDDFNMDLQKAYSIIEGSPRQIS 142

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
           V      +   + R+S+GVQS  +  L  + R   +++   A+ + +      + DLIY 
Sbjct: 143 VEKLNLLKDFSLKRLSIGVQSFIDSELLTIQRAEKSADVYKALEIIKTYDFDTNIDLIYG 202

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +PKQ        +  AL Y    + LY L  +      +++   D+ +  +     LY +
Sbjct: 203 IPKQNEETLIFSIDEALKYNPSEIFLYPLYKQVNA---RLYDKFDIDVQKQ---YKLYQI 256

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-------KVGSH 291
            +    + G    ++S  SF    S  N N   + D + +G G  S         K  S 
Sbjct: 257 GRDYLLSKGYE--QLSMRSF-SKNSKINAN-CGFEDVLSLGCGGRSYFENLHFCEKYVSE 312

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +   S E   E +LK  + +  + +    L  ++    +++  L    G+S+ D+     
Sbjct: 313 KK--SCESEYEKYLK--KDDFTSDISYYILDDDEMKRRYVIKNLLYISGLSISDYYRHFA 368

Query: 352 RNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +L  D     NL ++G+ +R     +  T  GM++ D +
Sbjct: 369 SDLESDFSIIANLLKEGYAQRHD-DIISLTPLGMSLSDMI 407


>gi|254425837|ref|ZP_05039554.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. PCC 7335]
 gi|196188260|gb|EDX83225.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. PCC 7335]
          Length = 474

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           + +Y H PFC   C +C  N+ + + K   + ++ + +  ++ +  L+ P R ++ + +G
Sbjct: 57  ISLYCHLPFCNSACYFCGCNTIITQNKAVVDPYLAALIGNIEQVAALSDPQRVVNQMHWG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  +    ++  + K ++ + + EI+IE +P  +  +   G R  G NRIS G+
Sbjct: 117 GGTPNYLSLEQAHRLMQKLKKRFSFADDAEISIEVSPRYLTRDYVLGLRLLGFNRISFGI 176

Query: 138 QSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q    Q    + R  +     + ++ I  AR  F  ++ D IY LP QT+  +   +++ 
Sbjct: 177 QDFNPQVQTAINRPQSEEMLFQVMSWIREAR--FQSVNVDFIYGLPYQTLETFHNTIRKT 234

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L    D ++++        L  +     +  LP+    +D+ +++    +A G
Sbjct: 235 LMLNPDRIAIFNFAYLPHLLPIQRKHIDERTLPAAAEKLDILHMSIDELTAGG 287


>gi|284926222|gb|ADC28574.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 451

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 12/237 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+    + + +LIL   +     S + EI+ E +P  +         + G NRIS 
Sbjct: 105 GGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFNRISF 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +E+  + + R  +      A++L RN     ++ DLIY LP Q +  +   L++ 
Sbjct: 165 GVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQTLEKV 224

Query: 195 LSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +    D L+++       ++K      M K  +  LPS +V +++    ++  S +G
Sbjct: 225 MLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCENFLSKNG 276


>gi|144900523|emb|CAM77387.1| Oxygen-independent coproporphyrinogen III oxidase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 449

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           +  L +Y+H  +C + C +C  ++ + R       ++++ L E++ + + L    +   +
Sbjct: 44  ATELSLYLHIAYCAEMCWFCGCHTKITRKYAPVATYLEALLAEVELVAKHLPAKMAARHV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+++ P++    ++ + +++ +  + EI +E +P + +    Q     GV R S
Sbjct: 104 HFGGGSPTILTPEDFVRTVETLRQHFILKPDAEIAVELDPRTADETYVQAMASVGVTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  + +    + R          I  L R+  P ++ DL+Y LP QT+      + +
Sbjct: 164 IGVQDFDPKVQEAINRIQPYDVTANVIEWLRRHGVPEINLDLVYGLPYQTVDGLLDTIDK 223

Query: 194 ALSYAVDHLSLY 205
           A  +    ++L+
Sbjct: 224 AHGFKPRRIALF 235


>gi|28869197|ref|NP_791816.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28852437|gb|AAO55511.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 460

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +YVH PFC   C YC  N  + + +   + ++Q    E++ +     P + + 
Sbjct: 49  KARRPLSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIRMLACHLAPSQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   +  +    R+ G 
Sbjct: 109 QLHLGGGTPTFLSHDELRRLMARLRAHFTLLEDDSGDYGIEIDPREADWASMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTPQGFSR 228

Query: 190 ELQRALSYAVDHLSLY 205
            +   +    D LS++
Sbjct: 229 TVDEIIELQPDRLSVF 244


>gi|229526534|ref|ZP_04415938.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae bv. albensis VL426]
 gi|229336692|gb|EEO01710.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae bv. albensis VL426]
          Length = 455

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGVDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 303


>gi|330953784|gb|EGH54044.1| coproporphyrinogen III oxidase [Pseudomonas syringae Cit 7]
          Length = 460

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           + S  L +YVH PFC   C YC  N  + + +   + +++    EM+ +     P + + 
Sbjct: 49  KASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLKRLEHEMRMLACHLAPGQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G 
Sbjct: 109 QLHLGGGTPTFLSHDELRRLMAQLRSHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPAQNPQTFSH 228

Query: 190 ELQRALSYAVDHLSLY 205
            + + +    D LS++
Sbjct: 229 TVDKVIDLQPDRLSVF 244


>gi|316935163|ref|YP_004110145.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
 gi|315602877|gb|ADU45412.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
          Length = 449

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + +Y+H PFC + C YC  N  +        ++++S + E+  +   L G   +  + FG
Sbjct: 47  ISLYLHVPFCKQMCWYCGCNMKLAAKYDPVADYVESLIDEINLVADALPGTMPVRHLHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++I+PQ++  ++  + + +    + E+ IE++P ++         + G  R S GV
Sbjct: 107 GGTPTVIDPQDLGAVMTLLRERFEFLPDAEVAIESDPRTLTAGMAAKIGELGFTRASFGV 166

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +    + R         A+   ++    R++FDLIY LP QT       +++ + 
Sbjct: 167 QEFDPKVQEAINRIQPPEMVARAMQQFKSAGVERINFDLIYGLPYQTAEDLRRTVEQCVE 226

Query: 197 YAVDHLSLY 205
              D ++L+
Sbjct: 227 MRPDRVALF 235


>gi|260777295|ref|ZP_05886189.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260606961|gb|EEX33235.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 456

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 6/248 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRS 70
           GQ +    +Y+H PFC  +C +C+F  +    K+  +++ ++ + E++    L  T    
Sbjct: 56  GQRNKKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDDYFEALINEIKQKSALPWTQTGV 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++ GGGTP+ +  + +  +   I + + +S++ EIT+E   +      F+   + G 
Sbjct: 115 FHAVYIGGGTPTDLSTEQVERLGKAIRQYFPLSTDCEITLEGRINRFSEEMFERALEGGF 174

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S G+QS + +  R   R  +    +  +  L+      +  DL+Y LP QT+  +E 
Sbjct: 175 NRFSFGIQSFDTKVRRSAKRLDDREVVLERVAQLSATEEAPIILDLLYGLPYQTLDVFEQ 234

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGL 248
           +L   +S     L LYQL +        + + G +  P+       +Y L  +    H +
Sbjct: 235 DLNDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKMPPPATTPDKASMYELGVAFMDKHYM 294

Query: 249 HAYEISNH 256
               + NH
Sbjct: 295 RQLSV-NH 301


>gi|299142110|ref|ZP_07035244.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
 gi|298576572|gb|EFI48444.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
          Length = 454

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A E++      N +  Y+H PFC   C YC  NS           + ++   E+  
Sbjct: 32  QYLKAVESSNNATADN-ISFYIHVPFCRHLCHYCGCNSVAMAKPDRITEYFETLHKEIDL 90

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+PS +    I  + + +   +    N EI IE +P  ++  
Sbjct: 91  LLPHLRKDRRISQIHYGGGSPSSMPLPLIRGVNEHLLSAFETIENPEIAIECHPGYLKAE 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++     +G NR SLG+Q      L  + R+ +       + + R    +++FD IY LP
Sbjct: 151 DWHYLLGSGFNRFSLGIQDFNADVLHTVNRHPSLLPVAEIMDILRKGGAKVNFDFIYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
           KQ++ ++   ++ A+S   D L  +
Sbjct: 211 KQSVKEFVSTIETAISLRPDRLVTF 235


>gi|253998540|ref|YP_003050603.1| coproporphyrinogen III oxidase [Methylovorus sp. SIP3-4]
 gi|253985219|gb|ACT50076.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           SIP3-4]
          Length = 464

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 2/201 (0%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL- 65
           +E   +      + +Y H PFC   C YC  N    R     E +++  L EM  +    
Sbjct: 38  HELQASRDSGRDISLYAHIPFCDTLCYYCGCNMVATRDYSKAERYLEVLLQEMALVADTA 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +  R +  + +GGGTP+ ++P ++  +    A+ + ++ + EI  E +P  +   +    
Sbjct: 98  SADRLVRQMHWGGGTPTYLKPDDLVKLHQAFARRFRMADDAEIGCEMDPRELTRAHVDAL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
              G NR+SLGVQ L+ Q    + R  +           R+     ++FDLI  LP QT 
Sbjct: 158 ASCGFNRLSLGVQDLDTQVQEAINRIQSQDLIEQVYGWIRDAGINSINFDLIIGLPHQTP 217

Query: 185 TQWEMELQRALSYAVDHLSLY 205
            ++   L   ++ A D L+++
Sbjct: 218 ERFARTLDAVIAMAPDRLAVF 238


>gi|254283659|ref|ZP_04958627.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent, putative [gamma proteobacterium NOR51-B]
 gi|219679862|gb|EED36211.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent, putative [gamma proteobacterium NOR51-B]
          Length = 444

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 2/185 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++++     ++   S  L +YVH PFC  KC  C  +S V       E ++     E+  
Sbjct: 38  QFVALANQQLSADVSTPLRLYVHVPFCSSKCFSCSRSSTVPSGSGEIEAYLDMLDLELAA 97

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  Q+  PR++  I  GGGTP+L+    +  ++  I K++ V+ + E+++ ANP+ V   
Sbjct: 98  VASQVENPRALDQIHLGGGTPNLLSEAQLLRLVSSIEKHFLVTDDTEMSLAANPNRVSSG 157

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G +RI   V+ + E   R LGR   A         AR   F R++ D +Y L
Sbjct: 158 QLALLNGLGFDRIRFEVRDVNETVQRSLGRFTTAEMLSDVFDSARQAGFQRITTDTLYGL 217

Query: 180 PKQTM 184
           P QT+
Sbjct: 218 PSQTI 222


>gi|331016971|gb|EGH97027.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 460

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +YVH PFC   C YC  N  + + +   + ++Q    E++ +     P + + 
Sbjct: 49  KARRPLSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIRMLACHLAPSQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   +  +    R+ G 
Sbjct: 109 QLHLGGGTPTFLSHDELRRLMARLRAHFTLLEDDSGDYGIEIDPREADWASMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTPQGFSR 228

Query: 190 ELQRALSYAVDHLSLY 205
            +   +    D LS++
Sbjct: 229 TVDEIIELQPDRLSVF 244


>gi|153824755|ref|ZP_01977422.1| coproporphyrinogen III oxidase [Vibrio cholerae MZO-2]
 gi|149741711|gb|EDM55740.1| coproporphyrinogen III oxidase [Vibrio cholerae MZO-2]
          Length = 453

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 243 GAQGVDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 301


>gi|330972469|gb|EGH72535.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 460

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + + 
Sbjct: 49  KASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   +       R+ G 
Sbjct: 109 QLHLGGGTPTFLSHDELRRLMAQLRLHFNLLEDDSGDYGIEIDPREADWATMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPAQNPQTFSH 228

Query: 190 ELQRALSYAVDHLSLY 205
            + + +    D LS++
Sbjct: 229 TVDKVIDLQPDRLSVF 244


>gi|168204882|ref|ZP_02630887.1| putative ferrochelatase [Clostridium perfringens E str. JGS1987]
 gi|170663641|gb|EDT16324.1| putative ferrochelatase [Clostridium perfringens E str. JGS1987]
          Length = 480

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/254 (19%), Positives = 125/254 (49%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E +   +   ++ +YV  PFC  +C YC F ++ +   K     ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVNPYLEALSKEISAISDYV 199

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +   I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 SKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKELNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|154148911|ref|YP_001405668.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
 gi|153804920|gb|ABS51927.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
          Length = 424

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 11/190 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+    + ++ +E F ++   EM  + +L       S++ GGGT
Sbjct: 40  LYAHVPFCHTFCPYCSFHKFYYQSELCKEYF-KNLRLEMTQIARLGF--KFDSLYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI+   +   L+   K + +    EI+ E++P+ ++  N   + K  +NR+S+GVQS 
Sbjct: 97  -TLIDEDELIKTLELAKKLFNID---EISCESDPNHIDAQNLARF-KGLINRLSVGVQSF 151

Query: 141 EEQSLRFLGR--NHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            ++ L+ +GR      SE  +  +  A  I P  S DLI+  P Q+   +  ++++A S 
Sbjct: 152 NDEILKKVGRFDKFGGSEVLLEKLSKAIGILPTFSLDLIFNFPFQSELDFREDIKKAKSI 211

Query: 198 AVDHLSLYQL 207
             D  + Y L
Sbjct: 212 GADQYTFYPL 221


>gi|167924609|ref|ZP_02511700.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei BCC215]
          Length = 464

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|303234161|ref|ZP_07320807.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna BVS033A4]
 gi|302494702|gb|EFL54462.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna BVS033A4]
          Length = 435

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 4/233 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y++ PFC  +C YC F + V +    +E ++   L E+  + +      I +I+ GGG
Sbjct: 125 NIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEVSKSIDKYKIKTIYVGGG 184

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ ++   +  +L  I + +   + +E T EA    S++ +  +  RK  V RISL  Q
Sbjct: 185 TPTSLDYTMLEKLLKAIEECFVSENLLEYTFEAGREDSLDFDKLKLLRKYNVTRISLNPQ 244

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  E++L+ +GR  N    I     A+++   ++ D I  L    +      L+      
Sbjct: 245 TFNEKALKAMGRIQNNENLIDLYTQAKDLGFVINMDFILGLLYDDVNNTRENLETLRKLQ 304

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            D+++ + L+I+ G+ + + +   +     EN+A     L +  TS +    Y
Sbjct: 305 PDNITFHTLSIKNGSKYSQQYDKENF---RENIAEKQMQLVKKWTSQNNYSPY 354


>gi|225848426|ref|YP_002728589.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643700|gb|ACN98750.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 462

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 23/205 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISS 73
              L +Y H PFC   C +C  N  + R K   + ++     EM   + L  T  R +  
Sbjct: 54  KTPLSLYFHIPFCENACHFCGCNVIITRRKEVVKPYLDHLYKEMDLYKNLIDTNNRKVVQ 113

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+ +  +    + + I K + +    E++IE +P  V+ +     ++ G NR+
Sbjct: 114 LHWGGGTPNYLSDEETVELFNEIKKRFIIDPQAEVSIEIDPRHVDKDRIFLLKEIGFNRV 173

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS-----------FDLIYALPKQ 182
           S G+Q            N    EA+  I     IF  MS            DLIY LP Q
Sbjct: 174 SFGIQDF----------NPKVQEAVNRIQPEEMIFNVMSWLRQAGFESVNIDLIYGLPYQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQL 207
           T+  +   +++ +    D ++++  
Sbjct: 224 TLETFTETIEKTIKLNPDRIAVFNF 248


>gi|86150670|ref|ZP_01068891.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596168|ref|ZP_01099405.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218562608|ref|YP_002344387.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85838851|gb|EAQ56119.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88191009|gb|EAQ94981.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112360314|emb|CAL35110.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315928351|gb|EFV07666.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 451

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 12/237 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+    + + +LIL   +     S + EI+ E +P  +         + G NRIS 
Sbjct: 105 GGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFNRISF 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +E+  + + R  +      A++L RN     ++ DLIY LP Q +  +   L++ 
Sbjct: 165 GVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQTLEKV 224

Query: 195 LSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 225 MLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|167895516|ref|ZP_02482918.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 7894]
          Length = 464

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|229522439|ref|ZP_04411855.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TM 11079-80]
 gi|229340424|gb|EEO05430.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TM 11079-80]
          Length = 455

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I  ++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRDSFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLSPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 303


>gi|223038811|ref|ZP_03609103.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           rectus RM3267]
 gi|222879784|gb|EEF14873.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           rectus RM3267]
          Length = 453

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 122/286 (42%), Gaps = 26/286 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             S  + +Y+H PFC   C +C  N      +  +E +I     E++ +   L     + 
Sbjct: 43  DASRPISLYLHLPFCRSACYFCGCNVIYTSKEERKEKYIDYLEKELEILSANLDTSAPVL 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  I+  I AK    S   EI+ E +P  +     +     G N
Sbjct: 103 QMHFGGGTPTFYSAEQLDKIIRLIKAKFKNFSLEAEISCEIDPRFLTREQLEALVSHGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A+ +AR      ++ DLIY LP QT+  ++  
Sbjct: 163 RISYGVQDFDERVQKEIHRIQPYEITKNAVDMARAKGINSINMDLIYGLPYQTLESFKAT 222

Query: 191 LQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           L +AL+ + D L+++       I+K      M K  +  LPS    +++   T      +
Sbjct: 223 LDKALTLSPDRLAVFNYAHVPWIKKS-----MRKFDEATLPSPKTKLEILKYTAEFFIKN 277

Query: 247 GLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIG 279
           G     + + +  G E        +LH  N+  Y      D IGIG
Sbjct: 278 GYKMIGMDHFAKPGDELFAALANGTLHR-NFQGYTTKGGADLIGIG 322


>gi|153801388|ref|ZP_01955974.1| hutW protein [Vibrio cholerae MZO-3]
 gi|124123054|gb|EAY41797.1| hutW protein [Vibrio cholerae MZO-3]
          Length = 455

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPDQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 303


>gi|167739810|ref|ZP_02412584.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 14]
 gi|167912162|ref|ZP_02499253.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 112]
          Length = 464

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|150025235|ref|YP_001296061.1| coproporphyrinogen III oxidase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771776|emb|CAL43250.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Flavobacterium psychrophilum JIP02/86]
          Length = 454

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFG 77
           + +Y+H PFC   C +C  N  + +    ++ +I++ L E  +  ++  P+ I   I  G
Sbjct: 52  ISLYIHLPFCESLCTFCGCNKRITKNHTVEKTYIEAVLKEWSFYCKILEPKPIIKEIHLG 111

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+    +N+  +++GI  + + + N E + E +P++    + Q     G  R+S GV
Sbjct: 112 GGTPTFFSAENLESLINGIFCHASKAENYEFSFEGHPNNTTREHLQILYDLGFRRVSFGV 171

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++  + + R             AR I +  +  DLI+ LP Q +      +++  S
Sbjct: 172 QDYSDKVQKAIHRVQPFQNVAKVTLWAREIGYTSIGHDLIFGLPFQELDDVVDTIEKTKS 231

Query: 197 YAVDHLSLY 205
              D L+ Y
Sbjct: 232 LLPDRLAFY 240


>gi|66046652|ref|YP_236493.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257359|gb|AAY38455.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Pseudomonas
           syringae pv. syringae B728a]
          Length = 461

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 4/196 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + + 
Sbjct: 49  KASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   +       R+ G 
Sbjct: 109 QLHLGGGTPTFLSHAELRRLMAQLRLHFNLLEDDSGDYGIEIDPREADWATMGLLRELGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +  
Sbjct: 169 NRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPAQNPQTFSH 228

Query: 190 ELQRALSYAVDHLSLY 205
            + + +    D LS++
Sbjct: 229 TVDKVIDLQPDRLSVF 244


>gi|154494178|ref|ZP_02033498.1| hypothetical protein PARMER_03525 [Parabacteroides merdae ATCC
           43184]
 gi|154086040|gb|EDN85085.1| hypothetical protein PARMER_03525 [Parabacteroides merdae ATCC
           43184]
          Length = 455

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 1/193 (0%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSIS 72
           Q   S+  Y H PFC + C YC  NS+        + ++ +   E+  +  L    R +S
Sbjct: 44  QQPESVSFYFHIPFCQRLCHYCGCNSYAAPKPEIIDRYVAALHKEIDLILPLLDKKRKVS 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I +GGGTP+ +    +  +   ++  + +  N E  IE +P  +   +++    AG NR
Sbjct: 104 QIHYGGGTPTFLPALELKELNAHVSDTFELIENPEKAIECHPGWMTGQDWEKLATAGFNR 163

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            S+G+Q   +Q L+ + R     +    + + R+   R++ D +Y LP QT   +   ++
Sbjct: 164 FSIGIQDFNKQVLQTVHRQTPLLQPEEIVTILRSYGVRINMDFLYGLPHQTEASFAETIE 223

Query: 193 RALSYAVDHLSLY 205
           +A+S   D L  +
Sbjct: 224 KAVSLKPDRLVTF 236


>gi|222824540|ref|YP_002576114.1| radical SAM domain protein [Campylobacter lari RM2100]
 gi|222539761|gb|ACM64862.1| radical SAM domain protein [Campylobacter lari RM2100]
          Length = 443

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 11/190 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+ +     + ++ F +S   E++ ++        +S++ GGGT
Sbjct: 45  LYAHVPFCHTFCPYCSFHKYYYDENLAKKYF-ESLREEIKQIKD--KGFDFTSMYVGGGT 101

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI  + +A  L+   K + +    EI+ E++P+ +E    + + K  ++R+S G+QS 
Sbjct: 102 -TLINEEELAKTLELCKKLFNIK---EISCESDPNHIEPKKLEMF-KGLIDRLSCGIQSF 156

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +L+ + R H   ++ E    +  A  + P MS DLI+  P QT  Q   +L+ A S 
Sbjct: 157 DDDTLKKVARYHKFGSSKELQEKLSKAIGVLPIMSIDLIFNFPSQTKEQLLNDLKIAKSL 216

Query: 198 AVDHLSLYQL 207
               ++ Y L
Sbjct: 217 KPQQITTYPL 226


>gi|115525932|ref|YP_782843.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisA53]
 gi|115519879|gb|ABJ07863.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisA53]
          Length = 450

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + +Y+H PFC + C YC  N  +         + Q  L E+  +   + G   ++ + FG
Sbjct: 47  ISLYLHVPFCKQMCWYCGCNMKLASRYEPVATYFQHLLDEVDLIADAMPGRMPVAHLHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++++P+++A ++  IA  + +  N E+ IE++P ++           G  R S GV
Sbjct: 107 GGTPTVLDPEDLATLMALIADRFRLVENAELAIESDPRTLTDAMVDKIGAIGFTRASFGV 166

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +    + R         A+   R+    +++FDLIY LP QT       +++ + 
Sbjct: 167 QEFDPKVQEAINRIQPPEMVENAMDRFRSAGVNKLNFDLIYGLPYQTAADLRRTVEQCVE 226

Query: 197 YAVDHLSLY 205
              D ++L+
Sbjct: 227 MKPDRVALF 235


>gi|213024211|ref|ZP_03338658.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 107

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 4/107 (3%)

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+ +   +L++A++    HLS YQLTIE  TLF         VLP ++   D++   
Sbjct: 1   PDQTLEEALNDLRQAIALNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQG 56

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
             + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH +V
Sbjct: 57  HQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKV 103


>gi|307824270|ref|ZP_07654496.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
 gi|307734650|gb|EFO05501.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
          Length = 460

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 6/232 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFG 77
           L +Y H PFC   C YC  N  V + +   E ++ +   E+     L    R ++ + +G
Sbjct: 55  LSLYFHIPFCDTVCFYCACNKIVTKNRKHAEPYLANLCKEIALQGDLFDSNRVVNQLHWG 114

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +  + +  ++    +++ + ++   E +IE +P        +  R+ G NR+SL
Sbjct: 115 GGTPTFLSYEQMTTLMAVTREHFHLRADDKGEYSIEVDPRETNDQTMKQLRELGFNRVSL 174

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +    + + R  +  +  + +  AR   F   + DLIY LP QT+  + + L + 
Sbjct: 175 GLQDFDPAVQKAVNRLQSEEQTFSVLEAARAEGFRSTNIDLIYGLPLQTVETFALTLDKI 234

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSA 245
           L+ + D  S++       T F    +  D  +PS +V + +  +  Q +T A
Sbjct: 235 LAVSPDRFSIFNYA-HMPTRFKIQRQINDADMPSPDVKLAILQMVGQRLTDA 285


>gi|168215560|ref|ZP_02641185.1| putative ferrochelatase [Clostridium perfringens NCTC 8239]
 gi|182382404|gb|EDT79883.1| putative ferrochelatase [Clostridium perfringens NCTC 8239]
          Length = 480

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQ-- 64
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   + ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVKPYLEALSKEISAISDYV 199

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
           L     I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 LKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKELNPDSLTIHGMSIKRAS---RLHENLILHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|268679025|ref|YP_003303456.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268617056|gb|ACZ11421.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 457

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 27/295 (9%)

Query: 6   AYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +YE  +  Q S+  L +Y H PFC   C +C  N      +  +E +I     E++ + Q
Sbjct: 34  SYEEVLAHQDSSRPLSLYFHLPFCRSACYFCGCNVVYTSKEDKKERYIAYLERELELLSQ 93

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNF 122
            L   R +  + FGGGTP+    + +  IL  I K++   + + EI+ E +P  +     
Sbjct: 94  HLDTSREVIQMHFGGGTPTFFSTEQLERILKAIKKHFKHFAKDAEISCEIDPRFLSKEQL 153

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
                 G NR+S GVQ   ++  + + R         A+ +A++     ++ DLIY LP 
Sbjct: 154 DVLTSNGFNRVSYGVQDFNDEVQKAIHRIQPYDVTQNAVTMAKSSGIKSINMDLIYGLPY 213

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           Q+   ++  L+ A+S     L+++       ++K      M K  +  LP  +V + +  
Sbjct: 214 QSFETFQETLRLAVSLDPTRLAVFNYAHVPWMKKS-----MRKIDETTLPHPSVKLAIMR 268

Query: 238 LTQSITSAHGL------HAYEISNHSFLGAES--LHNLNYWRY-----GDYIGIG 279
            T     ++G       H  +  +  FL  E   LH  N+  Y      D IGIG
Sbjct: 269 YTIDYLESNGYKMIGMDHFAKPDDELFLAIEKGELHR-NFQGYTTKGGADLIGIG 322


>gi|168214145|ref|ZP_02639770.1| putative ferrochelatase [Clostridium perfringens CPE str. F4969]
 gi|170714365|gb|EDT26547.1| putative ferrochelatase [Clostridium perfringens CPE str. F4969]
          Length = 480

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQ-- 64
           E +   +   ++ +YV  PFC  +C YC F ++ +   K   + ++++   E+  +    
Sbjct: 140 EESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVKPYLEALSKEISAISDYV 199

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
           L     I +++FGGGTP+ +  +   +++  I  ++  +  + E T+E   P S+     
Sbjct: 200 LKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSITEEKL 259

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I  LP 
Sbjct: 260 KTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIIIGLPN 319

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD----GDLVLPSENVAVDLYN 237
           + +++             D L+++ ++I++ +   ++H++      + +  +     +Y 
Sbjct: 320 EDISEVSKTCSMIKELNPDSLTIHGMSIKRAS---RLHENLVLHNTITIAEQKNLNKMYE 376

Query: 238 LTQSITSAHGLHAY 251
           +++ +     +H Y
Sbjct: 377 MSKVLGRELNMHPY 390


>gi|53720256|ref|YP_109242.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei K96243]
 gi|167817033|ref|ZP_02448713.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 91]
 gi|52210670|emb|CAH36654.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei K96243]
          Length = 464

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPNVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|254284539|ref|ZP_04959506.1| hutW protein [Vibrio cholerae AM-19226]
 gi|150425324|gb|EDN17100.1| hutW protein [Vibrio cholerae AM-19226]
          Length = 455

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQLV-DAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPDQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGVDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSV-NH 303


>gi|126438510|ref|YP_001060073.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 668]
 gi|126218003|gb|ABN81509.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 668]
          Length = 464

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALHAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|76811520|ref|YP_334494.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1710b]
 gi|126455007|ref|YP_001067334.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1106a]
 gi|134280231|ref|ZP_01766942.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
 gi|167846934|ref|ZP_02472442.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei B7210]
 gi|237813465|ref|YP_002897916.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
 gi|242316333|ref|ZP_04815349.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
 gi|254180957|ref|ZP_04887555.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
 gi|254191800|ref|ZP_04898303.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196022|ref|ZP_04902447.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
 gi|254258876|ref|ZP_04949930.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
 gi|76580973|gb|ABA50448.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710b]
 gi|126228649|gb|ABN92189.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106a]
 gi|134248238|gb|EBA48321.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
 gi|157939471|gb|EDO95141.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169652766|gb|EDS85459.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
 gi|184211496|gb|EDU08539.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
 gi|237503490|gb|ACQ95808.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
 gi|242139572|gb|EES25974.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
 gi|254217565|gb|EET06949.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
          Length = 464

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALHAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|254298930|ref|ZP_04966380.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
 gi|157809112|gb|EDO86282.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
          Length = 464

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALHAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|291531040|emb|CBK96625.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium siraeum 70/3]
          Length = 480

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
           + +Y+  PFC  +C YC F S      +   +++    L E+     +    S  + +++
Sbjct: 158 ISLYISIPFCPSRCSYCSFISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTVY 217

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +    +  ++D + + + +++  E T EA  P ++  +  +  +  GV RIS
Sbjct: 218 IGGGTPTTLSASQLDRLIDKLGE-FDIANIREFTAEAGRPDTITEDKLRTLKNGGVRRIS 276

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+ +  L  +GR H   +   A  +AR + F  ++ D+I  LP +T   +E  LQ+
Sbjct: 277 INPQSMNDSVLEAVGRRHTVKQVCEAFDIARKVGFDCINSDIIAGLPAETEHSFEASLQQ 336

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK 217
               + ++++++ L++++ +  ++
Sbjct: 337 LCKLSPENITVHTLSLKRSSALFR 360


>gi|313683117|ref|YP_004060855.1| oxygen-independent coproporphyrinogen iii oxidase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155977|gb|ADR34655.1| oxygen-independent coproporphyrinogen III oxidase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 455

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 4/205 (1%)

Query: 5   SAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
            AY + +  Q  S  L +Y H PFC   C +C  N      +  +E +I     E+Q + 
Sbjct: 33  DAYLSKLHSQDPSRELSLYFHLPFCKNACYFCGCNVVFTSKEDKKERYIDYLTRELQILS 92

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNN 121
             +   R +  + FGGGTP+  +   +  I+  I  ++   +   EI+ E +P  ++   
Sbjct: 93  THIDVNRPVIQLHFGGGTPTFFDADQLHRIITAIKSHFKNFAEGAEISCEIDPRHIDEAQ 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +    AG NR+S G+Q  +++    + R         A+ LAR      ++ DLIY LP
Sbjct: 153 MKVLSDAGFNRVSFGIQDFDDKVQVAVHRVQPYDITKTAMELARKYNMVSVNVDLIYGLP 212

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            Q++  ++  L  A+S   D  +++
Sbjct: 213 HQSLETFKKTLDLAISLDPDRFAVF 237


>gi|163761661|ref|ZP_02168731.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
 gi|162281155|gb|EDQ31456.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
          Length = 449

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 100/192 (52%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
            +L +Y+H P+C + C +C  N+   RRY    + ++ +   E++ +  L  P   ++++
Sbjct: 45  QTLSLYIHIPWCDRLCWFCGCNTKQTRRYDP-LKTYLAALENEIETISGLVDPGCRVTAL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGG+P++++P+++  +   +   +      EI++E +P+ ++ + +    + G+ R S
Sbjct: 104 HLGGGSPTMLKPEDMVWLDKALRSRFHFDDGAEISVEMDPNDLDADKYDALAEIGLTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  +E+  + + R     +    +   R    R ++ D++Y LP QT    +  +++
Sbjct: 164 IGVQDFDEKVQQAINREQTFEQTREVVEQVRARGVRSVNCDVLYGLPHQTRQSVDRTIEQ 223

Query: 194 ALSYAVDHLSLY 205
            +S   D ++L+
Sbjct: 224 VVSLRPDRIALF 235


>gi|253827615|ref|ZP_04870500.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
 gi|253511021|gb|EES89680.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
          Length = 459

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 3/195 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
           + +N L +YVH PFC   C +C  N      +  +  +++    E++ ++  L   + + 
Sbjct: 47  KDTNPLSLYVHLPFCRSACYFCGCNVIYTSKEENKTLYLEELQKELRILKNTLDYTKQVY 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  +   +    +  EI  E +P     +  Q  +  G N
Sbjct: 107 QLHFGGGTPTFFNAKELEFLIQMLKDTFPNFHTEAEIACEIDPRFFNKDQMQVLKNGGFN 166

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           R+S G+Q    +    + R    S    AI +AR+   R ++FDLIY LP QT+  ++  
Sbjct: 167 RLSFGIQDFNPKVQEAIHRIQPFSLVQNAISIARDFGIRSINFDLIYGLPYQTLETFQET 226

Query: 191 LQRALSYAVDHLSLY 205
           L + L    D  +++
Sbjct: 227 LSQCLKLNPDRFAIF 241


>gi|213967526|ref|ZP_03395674.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
 gi|301386489|ref|ZP_07234907.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062811|ref|ZP_07254352.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           K40]
 gi|302131310|ref|ZP_07257300.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927827|gb|EEB61374.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
          Length = 460

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E++ +     P + +  +  G
Sbjct: 54  LSLYVHIPFCANICYYCACNKVITKDRGRAQVYLQRLEHEIRMLACHLAPSQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++T+    + +  IE +P   +  +    R+ G NR+SL
Sbjct: 114 GGTPTFLSHDELRRLMARLRAHFTLLEDDSGDYGIEIDPREADWASMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPRQTPQGFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|91975964|ref|YP_568623.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB5]
 gi|91682420|gb|ABE38722.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris BisB5]
          Length = 449

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 6/191 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + +Y+H PFC + C YC  N  +        ++++S + E+  +   + G   +  + FG
Sbjct: 47  ISLYLHVPFCKQMCWYCGCNMKLASKYGPVADYVESLIDEIDLVADAMPGTLPVRHLHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++IEP+++  I+  + + +   S+ E+ IE++P ++         + G  R S GV
Sbjct: 107 GGTPTVIEPEDLGAIMTLLRERFEFVSDAEVAIESDPRTLTDEMAAKIGELGFTRASFGV 166

Query: 138 QSLEEQSLRFLGR---NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           Q  + +    + R       + A+A    A     R++FDLIY LP QT       +++ 
Sbjct: 167 QEFDPKVQAAINRIQPPEMVAHAMARFKAAG--VQRINFDLIYGLPYQTAEDLRSTVEQC 224

Query: 195 LSYAVDHLSLY 205
           +    D ++L+
Sbjct: 225 VEMKPDRVALF 235


>gi|162147071|ref|YP_001601532.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544132|ref|YP_002276361.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785648|emb|CAP55219.1| putative Oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531809|gb|ACI51746.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 454

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 3/192 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
             L +Y+H PFC   C +C  N+ V R   G+  +    + E++ +    GP   +  + 
Sbjct: 46  TPLSLYLHVPFCDALCLFCGCNTSVMRDPAGRTAYGALLMDELRRVAGRLGPDHPVRHVQ 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P+ +   +  I + +T+  + EI IE +P  +        R  G NR+SL
Sbjct: 106 WGGGTPTTLPPETMRAAMQTIRRLFTIERDAEIAIELDPRHMPDAYPDLLRTLGFNRVSL 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT-QWEMELQR 193
           GVQ L+       GR  + ++    +   R      ++ DLIY LP QT+    E     
Sbjct: 166 GVQDLDPAVQTACGRIQSRAQTEDCVRRVRAAGIASVNVDLIYGLPYQTVDGAGETAATV 225

Query: 194 ALSYAVDHLSLY 205
           A +   D L+++
Sbjct: 226 AAALRPDRLAVF 237


>gi|310658606|ref|YP_003936327.1| coproporphyrinogen III oxidase [Clostridium sticklandii DSM 519]
 gi|308825384|emb|CBH21422.1| putative coproporphyrinogen III oxidase [Clostridium sticklandii]
          Length = 471

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 13/205 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ------WMRQLTGPRSI 71
           S  +Y+  PFC  +C YC F S        ++N I  +L  ++      +  ++   + +
Sbjct: 147 SYSIYISIPFCPSRCNYCSFFSCSLD---KEQNLIDPYLDSLEKELKFFYSNKVIYDKEL 203

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAG 129
            SI+ GGGTPS +       ++  I + +    NV E T EA  P +++    +  + + 
Sbjct: 204 LSIYIGGGTPSTLSINQFQRLI-KILQTYVPLKNVKEFTFEAGRPDTLDREKLEAIKMSP 262

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V R+S+  Q++ + +L+ +GRNH  S+ I    ++R+I F  ++ DLI  L  +++    
Sbjct: 263 VTRLSINPQTMNDVTLKKIGRNHTVSDIIECFKISRDIGFDNINMDLILGLEDESIENIT 322

Query: 189 MELQRALSYAVDHLSLYQLTIEKGT 213
             L        D L+++ L I+K +
Sbjct: 323 KTLSHIKELKPDSLTVHTLAIKKAS 347


>gi|313679186|ref|YP_004056925.1| coproporphyrinogen dehydrogenase [Oceanithermus profundus DSM
           14977]
 gi|313151901|gb|ADR35752.1| Coproporphyrinogen dehydrogenase [Oceanithermus profundus DSM
           14977]
          Length = 437

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 160/350 (45%), Gaps = 29/350 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC   CP+C FN+H    +  Q +++ ++   E+  M +  G     + + GGG
Sbjct: 38  LYIHVPFCESICPFCMFNAHKLDRRSSQVQDYFEALKREL-LMYEAAG-FDFGAAYVGGG 95

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+  + +A  L+ +   + ++   E+++EANP  +     Q    AGV+R+S+GVQS
Sbjct: 96  TPALVH-EELARFLEFVRGRFDLT---EVSVEANP-RIPDAAVQSLAAAGVDRLSVGVQS 150

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            ++  L  LGR     + +E    ++     F  ++ D I+ LP         +LQ A+ 
Sbjct: 151 FDDGMLERLGRLEAYGSGAEIRERVNRLLGRFRIVNVDFIFNLPNHDPEVLARDLQIAVD 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +D L+ Y L   +    Y + + G +     +  ++ Y   + I      H   +S+ 
Sbjct: 211 DGIDQLTTYPLMEAQQNRGY-VDRQGRI-----SYDLEAYLYKRVILPTLREHYTPVSSW 264

Query: 257 SFLGAES--LHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            F   +   +  L+ +   Y DY+GIG G+ S   +   RV+++    P     + +   
Sbjct: 265 CFSRKDKPEVDMLDEYVVDYFDYVGIGTGSMS---LHDGRVSVNAYTLPLYQRLVAQGRL 321

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIEC 358
             V+E   L+       +LMM L  R  +  K +E + G    R L  EC
Sbjct: 322 PVVLESAPLARRDYMLYYLMMALFGRR-VDCKKFEAIFGVPLRRALWPEC 370


>gi|238059271|ref|ZP_04603980.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
 gi|237881082|gb|EEP69910.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
          Length = 399

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 13/275 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSI 74
           ++L +YVH PFC  +C +C+  +           +++    + + +    G  PR  + +
Sbjct: 45  DALFLYVHVPFCEMRCGFCNLFTRTGAPAEQVTAYLRQLRRQAERVADALGGDPRH-ARV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            FGGGTP+ +    +  + D IA +   +    V +++E +P++   +        G  R
Sbjct: 104 AFGGGTPTYLTAGELTELFD-IATSTLGARLPGVPLSVETSPATATPDRLAVLAAHGATR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS  +   R  GR    +E  AA+   R+   P ++ DLIY +  QT   W   L
Sbjct: 163 VSIGVQSFLDAEARAAGRPQRRTEVEAALGAIRDAAIPLLNVDLIYGIDGQTADTWRRSL 222

Query: 192 QRALSYAVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             AL++  + L LY L +   T L  + H   D     +   + LY     +  A G   
Sbjct: 223 DAALAWRPEELYLYPLYVRPLTGLGRRAHARADW----DAQRLALYTQAVEVLGAAGYRQ 278

Query: 251 YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +       A +    +Y    D  +G+G GA S
Sbjct: 279 ESMRQFRRADAPTPDGPDYCCQDDGMVGLGCGARS 313


>gi|326795429|ref|YP_004313249.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
 gi|326546193|gb|ADZ91413.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
          Length = 456

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 7/198 (3%)

Query: 14  QGSN-SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           +GSN  + +Y H PFC   C YC  N  V ++Y  G E +++    EM+     L   R 
Sbjct: 42  EGSNLPISLYFHIPFCAHLCYYCACNKVVTKKYDKGAE-YVELLAEEMRLRALMLDRDRK 100

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           ++ +  GGGTP+ +   N+  +   + +N+ +    + + +IE +P  V+       ++ 
Sbjct: 101 VTQLHLGGGTPTFLSVDNMRTLFKHVEENFNLVKDDSQDFSIEIDPREVDNAQLVLLKEF 160

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+SLG+Q  +    + + R  +       +   R   F  ++FDLIY LP QT T +
Sbjct: 161 GFNRVSLGIQDFDPVVQKAIHREQSRELVAKVLDDVRTAGFKSVNFDLIYGLPHQTTTSF 220

Query: 188 EMELQRALSYAVDHLSLY 205
              +   +    + +S++
Sbjct: 221 MQTIDSVIELNPERISVF 238


>gi|291458834|ref|ZP_06598224.1| oxygen-independent coproporphyrinogen III oxidase 2 [Oribacterium
           sp. oral taxon 078 str. F0262]
 gi|291418088|gb|EFE91807.1| oxygen-independent coproporphyrinogen III oxidase 2 [Oribacterium
           sp. oral taxon 078 str. F0262]
          Length = 535

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 107/203 (52%), Gaps = 12/203 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQW-MRQLTGP-RSISSIF 75
           +YV  PFC  +C YC F S+   +   ++G  +++     E++  M +++   + + +++
Sbjct: 173 LYVGIPFCPTRCLYCSFLSNPISLWEKRIG--DYLDCLRREIRAAMEEMSAQGKHLQTVY 230

Query: 76  FGGGTPSLIEPQNIALILDGIAKNW---TVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
            GGGTP+ +  + ++ +++ + +      ++   E T+EA  P S+     Q  + AG +
Sbjct: 231 VGGGTPTALPERWLSALMETLREECFCHPMTELCEFTVEAGRPDSLNREKLQILKDAGAD 290

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L  +GR H A +  +A  +AR+  F  ++ DLI  LP + +++    
Sbjct: 291 RISVNPQSFRQETLDLIGRRHTAEDVRSAFSMARDAGFSDINMDLIMGLPGEGLSEVTET 350

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
           L      A D L+++ L +++  
Sbjct: 351 LSETARLAPDSLTVHSLAVKRAA 373


>gi|253826928|ref|ZP_04869813.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|253510334|gb|EES88993.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
          Length = 427

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 11/190 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC+  C YC FN  + +    +  F +S   EM  +++L      ++I+ GGGT
Sbjct: 48  LYIHIPFCMTLCTYCSFNRFLFQEDKAKAYF-KSLRKEMLMVKELG--YDFNAIYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P+ +   LD +AK  ++ S  E++ E++P+ + +   + + K  ++R+S+GVQS 
Sbjct: 105 TSIM-PKELCETLD-LAK--SLFSIKEVSCESDPNHLHLEELEMF-KGRIDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  LR +GR     +  E I  +  A  + P ++ DLI+  P QT      +L+     
Sbjct: 160 DDGILRKVGRYEKFGSGEEVIKKLQKAIGVLPILNVDLIFNFPNQTKEMLAKDLEIIKEL 219

Query: 198 AVDHLSLYQL 207
             + ++LY L
Sbjct: 220 KPEQVTLYPL 229


>gi|53725897|ref|YP_103737.1| coproporphyrinogen III oxidase [Burkholderia mallei ATCC 23344]
 gi|67643998|ref|ZP_00442741.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|121601330|ref|YP_992084.1| coproporphyrinogen III oxidase [Burkholderia mallei SAVP1]
 gi|124385408|ref|YP_001028529.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10229]
 gi|126450535|ref|YP_001081573.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10247]
 gi|166998379|ref|ZP_02264239.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
 gi|217421130|ref|ZP_03452635.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|254175481|ref|ZP_04882141.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
 gi|254202439|ref|ZP_04908802.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|254207771|ref|ZP_04914121.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|254356328|ref|ZP_04972604.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|52429320|gb|AAU49913.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 23344]
 gi|121230140|gb|ABM52658.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei SAVP1]
 gi|124293428|gb|ABN02697.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126243405|gb|ABO06498.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147746686|gb|EDK53763.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|147751665|gb|EDK58732.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|148025325|gb|EDK83479.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|160696525|gb|EDP86495.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
 gi|217396542|gb|EEC36559.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|238525479|gb|EEP88907.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|243065442|gb|EES47628.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
          Length = 464

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNVETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPNVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|224418291|ref|ZP_03656297.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|313141823|ref|ZP_07804016.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
 gi|313130854|gb|EFR48471.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
          Length = 456

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 3/195 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
           + +N L +YVH PFC   C +C  N      +  +  +++    E++ ++  L   + + 
Sbjct: 44  KDTNPLSLYVHLPFCRSACYFCGCNVIYTSKEENKTLYLEELQKELRILKNTLDYTKQVY 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  +   +    +  EI  E +P     +  Q  +  G N
Sbjct: 104 QLHFGGGTPTFFNAKELEFLIQMLKDTFPNFHTEAEIACEIDPRFFNKDQMQVLKNGGFN 163

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           R+S G+Q    +    + R    S    AI +AR+   R ++FDLIY LP QT+  ++  
Sbjct: 164 RLSFGIQDFNPKVQEAIHRIQPFSLVQNAISIARDFGIRSINFDLIYGLPYQTLETFQET 223

Query: 191 LQRALSYAVDHLSLY 205
           L + L    D  +++
Sbjct: 224 LSQCLKLNPDRFAIF 238


>gi|167825444|ref|ZP_02456915.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 9]
 gi|226193908|ref|ZP_03789510.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
 gi|225934213|gb|EEH30198.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
          Length = 464

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNVETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFDPNVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|7416777|dbj|BAA94026.1| ORF468 [Rubrivivax gelatinosus]
          Length = 468

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 5/205 (2%)

Query: 7   YENNMTG---QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           YE  + G   +    L V    PFC   C  CD +    +     ++++   + E++ + 
Sbjct: 58  YEAALRGLADRPDEPLAVSARVPFCAAHCFCCDRDIRAAQPDEVIDDYVAGLVEEIREVA 117

Query: 64  Q-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           Q L G R +     GGGT S +    +A ++  +   W + ++++++ E +P  V    F
Sbjct: 118 QVLGGRRELLQFHLGGGTASELTGSQLARLVQAMQSQWRMPADIDMSCECDPRRVSQTMF 177

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R  G  R+SLGV  L+    + +GR  +A+       LAR+     ++ DL+  LP+
Sbjct: 178 EVLRGLGFRRVSLGVLDLDPNVQQAIGRRQSAALIDDVCELARSAGIEYINLDLMIGLPR 237

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQ 206
           QTM  W   + R ++   + + L +
Sbjct: 238 QTMASWCATVDRLIAMGPERIRLAR 262


>gi|222529926|ref|YP_002573808.1| coproporphyrinogen III oxidase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456773|gb|ACM61035.1| Coproporphyrinogen dehydrogenase [Caldicellulosiruptor bescii DSM
           6725]
          Length = 471

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 11/243 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISS 73
           S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++  + +       I +
Sbjct: 155 SACLYIGIPICPTKCLYCSFSCHEMTRQVKSLLGMYTDSLICELEKTYQKIEENRNKIVA 214

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ--GYRKAGV 130
           I+FGGG+P+++  +NI  I   + +N       EIT EA  P +++V+  +    +   +
Sbjct: 215 IYFGGGSPAVLGIENIKKIFTNLFENLEKDHIREITFEAGRPDTIDVSLLELLADQSKEL 274

Query: 131 N-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           N R+ +  QS  + +L+ +GRNH   +   A  LA+   F  ++ D+I  LP +    ++
Sbjct: 275 NIRLCINPQSSNDNTLKIIGRNHTFEDIKRAFALAKEYGFKNINSDVILGLPGEDENDYK 334

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++  L  +   ++++ L+I++ +L     K  +     E    +L N TQ I   HG 
Sbjct: 335 KTIEDVLKLSPASITVHTLSIKRASLL--RFKWNEYEFMDEETVNNLLNWTQYILEEHGY 392

Query: 249 HAY 251
             Y
Sbjct: 393 IPY 395


>gi|206602105|gb|EDZ38587.1| Oxygen-independent coproporphyrinogen III oxidase [Leptospirillum
           sp. Group II '5-way CG']
          Length = 459

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 3/193 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           +  L +Y H PFC   C +C  ++ + R K    ++I     E+  + ++    R +  +
Sbjct: 50  AKPLSLYFHIPFCEMLCYFCGCSTIISRDKGKAADYIDVLGAEIALLGKRFPKSRKVVQL 109

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            FGGGTPS + P    ++   I + + V     EI+IE +P     +  +  R+ GVNRI
Sbjct: 110 HFGGGTPSSLTPAQNRVLFSHINRWFDVDYQEGEISIEIDPRHASDDYLETVRELGVNRI 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +    + + R              R + F  ++ DLIY LP QT+  +E  L 
Sbjct: 170 SMGVQDFDPVVQKAVNRIQPVELTEKVYRKVRELGFHSINIDLIYGLPFQTVKGFEKTLD 229

Query: 193 RALSYAVDHLSLY 205
             +  + D L+++
Sbjct: 230 EIIRMSPDRLAIF 242


>gi|220922097|ref|YP_002497398.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
 gi|219946703|gb|ACL57095.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
          Length = 456

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 96/186 (51%), Gaps = 2/186 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGT 80
           Y+H PFC + C YC  ++ V R     E ++ +   E+  +  +L G  ++  + +GGGT
Sbjct: 56  YIHVPFCAELCLYCGCHTKVVRRYGPVEAYVAALEREIDLVSDRLAGRPTLRHLHWGGGT 115

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++   ++  +++ +   +  + ++EI +E +P ++   + +     GV R SLGVQSL
Sbjct: 116 PTMLRGSDMRRLVERLRGRFAFAPDIEIAVEIDPRTLTPAHVETLAAIGVTRASLGVQSL 175

Query: 141 EEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + +  R + R  + +E    +   R +    ++ DL+Y LP QT+      +   +  A 
Sbjct: 176 DPEVQRTIRRIQSVAETARVVEWLRFSGIDAVNVDLMYGLPHQTVENVVATVDHVVGLAP 235

Query: 200 DHLSLY 205
           D ++++
Sbjct: 236 DRVAVF 241


>gi|300863685|ref|ZP_07108619.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
 gi|300338317|emb|CBN53765.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
          Length = 465

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
              L +Y H PFC   C +C  N+ + + K   E ++   L ++  M +L    R++  +
Sbjct: 54  KTPLSLYCHIPFCETACYFCGCNTVITQRKEISEPYLNYLLRDISQMAELISRDRTVQQM 113

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +    +  +   I +++      EI+IE NP ++  N     R+ G NRIS
Sbjct: 114 HWGGGTPNYLSLSQVETLWTAINQHFKFDPQAEISIEVNPRTLNRNYVLFLRELGFNRIS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q    Q    + R         A+   +   F  ++ DLIY LP Q +  +   +++
Sbjct: 174 FGIQDFNPQVQEAVNRIQPEDLLFDAMGWIKEAGFESVNVDLIYGLPHQNLDTFRDTIKK 233

Query: 194 ALSYAVDHLSLY 205
            +    D ++++
Sbjct: 234 TIKLDPDRIAVF 245


>gi|115525156|ref|YP_782067.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisA53]
 gi|115519103|gb|ABJ07087.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisA53]
          Length = 470

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 9/227 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGG 78
            Y+H P+C   C +C F  +V R +V    F+   + E++      L     I +++ GG
Sbjct: 84  AYIHVPYCQNHCLFCGFFQNVWRPEVAGP-FVDDVIAEIESSAATALVASAPIEAVYIGG 142

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +++A ++  + +   ++ + EIT+E       V        AG  RISLGVQ
Sbjct: 143 GTPSALPSEHLARLIAALRQLLPLTPDCEITLEGRSHGFGVAKAAAALDAGATRISLGVQ 202

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           S      R LGR  +  E   A+ L   +   R S   DLIY LP Q    W  +++ A 
Sbjct: 203 SFATDVRRRLGRKLSGPE--VALFLEELVGLKRASIVCDLIYGLPGQDHDGWLRDIEIAN 260

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              +D ++LY L +  G       + G L  P+ ++A    +    I
Sbjct: 261 QIGLDGVTLYALNLFPGGPLASAIERGKLP-PAGSIAAQARDYAAGI 306


>gi|86141762|ref|ZP_01060286.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Leeuwenhoekiella blandensis MED217]
 gi|85831325|gb|EAQ49781.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Leeuwenhoekiella blandensis MED217]
          Length = 453

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           + +Y+H PFC   C +C     + +    +  +I + L E+   R   G R  I  +  G
Sbjct: 51  ISLYIHLPFCESMCTFCGCTKRITKNHSVETPYIDAVLKELALYRSFVGERPVIQQVHLG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+     N+A +++GI K+   +   E++ E +P++  + + +     G  R+  GV
Sbjct: 111 GGTPTFFSEHNLARLINGIFKHADKAPQCEMSFEGHPNNTTLEHLETLASFGFKRVCYGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   E   + + R    +    A   AR   +  +  D+I+ LP Q +   +  +++ + 
Sbjct: 171 QDYNETVQKAINRIQPFAHVQRATDQARQAGYTSVGHDIIFGLPFQKLEHVKNTIEKTIQ 230

Query: 197 YAVDHLSLY 205
              D ++ Y
Sbjct: 231 LFPDRIAFY 239


>gi|291557494|emb|CBL34611.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium siraeum V10Sc8a]
          Length = 480

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 12/207 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF----LTEMQWMRQLTGPRS--IS 72
           + +YV  PFC  +C YC F S       G    I  +    L E+     +    S  + 
Sbjct: 158 ISLYVSIPFCPSRCSYCSFISASGE---GALKLIGDYFGLLLKELDIYADIVKRFSLKVD 214

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVN 131
           +++ GGGTP+ +    +  ++D + + + +++  E T EA  P ++  +  +  +  GV 
Sbjct: 215 TVYIGGGTPTTLSASQLDRLIDKLGE-FDIANIREFTAEAGRPDTITEDKLRALKNGGVR 273

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS+ +  L  +GR H   +   A  +AR + F  ++ D+I  LP +T   +E  
Sbjct: 274 RISINPQSMNDSVLEAVGRRHTVKQVCEAFDIARKVGFDCINSDIIAGLPAETEHSFEAS 333

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
           LQ+    + ++++++ L++++ +  ++
Sbjct: 334 LQQLCELSPENITVHTLSLKRSSALFR 360


>gi|325287113|ref|YP_004262903.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
 gi|324322567|gb|ADY30032.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
          Length = 453

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS 73
            +  + +Y+H PFC   C +C  +  + +    +  +IQ+ L E Q +   L     +  
Sbjct: 47  ATEGISLYIHLPFCESLCTFCGCHKRITKRHEVETPYIQAVLKEWQLYCNMLPEKPIVKE 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+   P+N+  +++GI +    ++  E + E +P++    + Q     G  R+
Sbjct: 107 LHLGGGTPTFFTPENLQALINGIFRKAERAAEYEFSFEGHPNNTTKAHLQALYNVGFRRV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ       + + R  +          AR I +  +  D+I+ LP QT+   E  + 
Sbjct: 167 SYGVQDYNSTVQKAINRVQSFENVKNVTEWAREIGYTSVGHDIIFGLPHQTLQHVEETIL 226

Query: 193 RALSYAVDHLSLY 205
           +      D L+ Y
Sbjct: 227 KTKELLPDRLAFY 239


>gi|223040087|ref|ZP_03610368.1| radical SAM domain protein [Campylobacter rectus RM3267]
 gi|222878673|gb|EEF13773.1| radical SAM domain protein [Campylobacter rectus RM3267]
          Length = 451

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 58/294 (19%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           QG+  + +Y H PFC   CPYC F+    +Y   QE     F    Q MRQ+     + +
Sbjct: 42  QGTEYM-LYAHVPFCHTFCPYCSFH----KYHYEQEIAKIYFENLRQEMRQVKDAGFNFT 96

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----EITIEANPSSVEVNNFQGYRKA 128
           S++ GGGT  + EP+        + K   ++  +    +++ E++P+ +E  N + ++  
Sbjct: 97  SLYVGGGTTLINEPE--------LEKTLILAKELFDIKDVSCESDPNHIEPENLKRFQ-G 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHN--ASEAI-AAIHLARNIFPRMSFDLIYALPKQTMT 185
            ++R+S+GVQS  ++ L+ + R+    +SE +   +  A  I P +S DLI+ LP QT  
Sbjct: 148 LIDRLSVGVQSFSDEILKKVARHEKFGSSEVLQEKLKKAMGILPTLSLDLIFNLPNQTKE 207

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +++ A S A + ++ Y L     T         D +  S  VA           S 
Sbjct: 208 QLLNDVKIAKSIAPEQITFYPLMKSPLT--------RDAIAKSLGVA----------DSD 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYG---------------DYIGIGPGAHS 284
           +    YE+   +F      H  N W +G               +Y+G+G GA S
Sbjct: 250 NEREFYELICENF---SDYHQSNAWAFGRDNANLRDEYVGSHHEYLGVGSGAFS 300


>gi|157415249|ref|YP_001482505.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386213|gb|ABV52528.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|315932119|gb|EFV11062.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 451

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILNTILDTKREVVQMHF 104

Query: 77  GGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+     + QN+ L +  +  N+  S + EI+ E +P  +         + G NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDAEISCEIDPRFLNEEQATVLTQNGFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++L R+     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|31621274|gb|AAP59032.1| HemN [Thiocapsa roseopersicina]
          Length = 453

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
           + VYVH PFC  +C YC  N+ +   +   + ++ +   EM  +  + G  R    +  G
Sbjct: 57  VSVYVHVPFCHVRCLYCACNTTITHSEEKVDQYLDTLDREMGLVADIIGRGRVTDQLHVG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +A +++ + + + +S     +IE NP              G  RIS GV
Sbjct: 117 GGTPNHLNEPQLARLMEIVERYFRISDRACTSIECNPRRTSAGQLDLLYGLGFKRISFGV 176

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q L     R +GR  +          AR+  F  ++ DLIY LP QT   ++  L + ++
Sbjct: 177 QDLNSDVQRAIGRVQSLDMVRDVFLTARDTGFESINLDLIYGLPFQTPEGFQQTLDQIVA 236

Query: 197 YAVDHLSLY 205
              D ++ +
Sbjct: 237 LGPDRVACF 245


>gi|89900724|ref|YP_523195.1| coproporphyrinogen III oxidase [Rhodoferax ferrireducens T118]
 gi|89345461|gb|ABD69664.1| oxygen-independent coproporphyrinogen III oxidase [Rhodoferax
           ferrireducens T118]
          Length = 465

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +YVH PFC   C YC  N  + ++      +++    E+     QL   ++++ +  G
Sbjct: 60  LSLYVHIPFCESLCYYCACNKIITKHHDRAGPYLRYLSREVDLHTEQLGVGQTVTQLHLG 119

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+ +    +  ++  + +N+T + + E +IE +P +++ +      + G NR+S G+
Sbjct: 120 GGSPTFLTDDELRELMAMLRRNFTFAPSGEYSIEVDPRTIDASRLDTLAELGFNRLSFGI 179

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +    + + R   A +  A +  AR   F  ++ DLIY LP Q+   ++  L + + 
Sbjct: 180 QDFDPDVQKSVHRVQPAEQVFALVAAARERGFDSINADLIYGLPLQSPESFDRTLAQVVE 239

Query: 197 YAVDHLSLY 205
              + ++LY
Sbjct: 240 LRPERIALY 248


>gi|307747891|gb|ADN91161.1| Oxygen-independent coproporphyrinogen-III oxidase [Campylobacter
           jejuni subsp. jejuni M1]
          Length = 451

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILNTILDTKREVVQMHF 104

Query: 77  GGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+     + QN+ L +  +  N+  S + EI+ E +P  +         + G NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDAEISCEIDPRFLNEEQATVLTQNGFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++L R+     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|289678944|ref|ZP_06499834.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 409

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +     P + +  +  G
Sbjct: 3   LSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLHLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G NR+SL
Sbjct: 63  GGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSL 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +   + + 
Sbjct: 123 GVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPTQNPQTFSHTVDKV 182

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 183 IDLQPDRLSVF 193


>gi|13774061|gb|AAG23394.1| HugW [Plesiomonas shigelloides]
          Length = 451

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 14/216 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-------MQWMRQLTGPRSISS 73
           +Y+H PFC  +C +C F  +     +  E F  + L+E       M W    T     ++
Sbjct: 66  LYIHIPFCRVRCTFCSFFQYAASPTLVAEYF--AALSEELKRKAAMPW----TQAAPFAA 119

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +  + I  +   I  ++ ++ + EIT+E   +      +      GVNR 
Sbjct: 120 VYIGGGTPTDLTAEQIFALGQLIKAHFPLTDDCEITLEGRLNRFSDEKYHAAVDGGVNRF 179

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQS +    R   R     + +  + HL       +  DL++ LP Q+ T W+ +LQ
Sbjct: 180 SFGVQSFDTDVRRKAKRLDPREKLLETVSHLVALDRAPIIVDLMFGLPHQSATAWQQDLQ 239

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             L      + LYQL   +GT   ++ ++  L  P+
Sbjct: 240 DFLHSGAHGVDLYQLIEMQGTPMARLVEENRLQAPA 275


>gi|320158229|ref|YP_004190607.1| radical SAM family protein HutW, coproporphyrinogen III
           oxidase-like protein, oxygen-independent, associated
           with heme uptake [Vibrio vulnificus MO6-24/O]
 gi|319933541|gb|ADV88404.1| radical SAM family protein HutW, coproporphyrinogen III
           oxidase-like protein, oxygen-independent, associated
           with heme uptake [Vibrio vulnificus MO6-24/O]
          Length = 459

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 8/213 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           +Y+H PFC  +C +C+F  N+  R+   G   + ++ L E+     L   +S    +++ 
Sbjct: 67  LYIHIPFCRVRCTFCNFFQNAASRQLVDG---YFEALLKEIAIKSALPWTQSGVFHAVYV 123

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P  +  + + I  ++ +S++ EIT+E   +      + G  K G NR S G
Sbjct: 124 GGGTPTDLSPTQVRQLGEAIRSHFPLSADCEITLEGRINRFSDEMYDGAMKGGFNRFSFG 183

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +    R   R  +  + +  +  LA      +  DL+Y LP QT      +L   +
Sbjct: 184 VQSFDTLVRRSAKRLDDREKVLTRLSELASYDQAPVIVDLLYGLPHQTRDILLQDLNDFI 243

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           S     L LYQL +        + + G L  P+
Sbjct: 244 STGAHGLDLYQLVVGGSAPMLNLVEKGKLPPPA 276


>gi|311898355|dbj|BAJ30763.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Kitasatospora setae KM-6054]
          Length = 447

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           G+  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+   P +  
Sbjct: 42  GEKQDALSLYLHVPFCEVRCGFCNLFTRIGSPEGLTTAYLDALERQAAQVREALAPGARF 101

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGV 130
           +   FGGGTP+ +    +  + D       V    V +++EA+P +   +  +   + G 
Sbjct: 102 ALAAFGGGTPTYLSAAELERLCDIAESRMGVDLRAVPLSVEASPDTATADRLRVLAERGT 161

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            R+SLGVQS  +   +   R    +   AA+   R   FP ++ DLIY +  QT   W  
Sbjct: 162 TRLSLGVQSFLDGEAKAAVRPQKRAAVEAALERVRAAGFPVLNVDLIYGIEGQTPASWVA 221

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L  AL +  + L LY L +   T
Sbjct: 222 SLDAALRWRPEELYLYPLYVRPLT 245


>gi|224438403|ref|ZP_03659330.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313144844|ref|ZP_07807037.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313129875|gb|EFR47492.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
          Length = 457

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 7/192 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C +C  N      +  +E +I     E+  ++  +   R +    FG
Sbjct: 52  LSLYTHLPFCRSACYFCGCNVVYTSKEEKKERYIHYLKKELALLKDSMDTSREVVQFHFG 111

Query: 78  GGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGTP+     E +++  ++ G+  N+  + N E++ E +P           ++ G NR+S
Sbjct: 112 GGTPTFFNAKELESVIGLIRGVFTNF--AKNAEVSCEVDPRFFSREQMAVLKENGFNRLS 169

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  +E+    + R  +      AI LAR      ++FDLIY LP Q+   +   LQ+
Sbjct: 170 FGVQDFDERVQEAIHRIQSVEIVSNAIALAREFGTESVNFDLIYGLPYQSEQSFADTLQK 229

Query: 194 ALSYAVDHLSLY 205
            +    D L+++
Sbjct: 230 VVGLKPDRLAIF 241


>gi|56698354|ref|YP_168727.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
 gi|56680091|gb|AAV96757.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria
           pomeroyi DSS-3]
          Length = 451

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----SI 71
           +++ +YVH PFC + C +C      R      +N + +++  ++    L   R      +
Sbjct: 49  SAISLYVHVPFCRRLCWFC----ACRTQGTQTDNPVIAYVDTLKAELALLAERLPEGVHL 104

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S + +GGGTP+L+ P+ +  +   I     +    E ++E +P+ ++        +AG+N
Sbjct: 105 SRLHWGGGTPTLLNPELMRGLARSIFDTVPLGPEAEFSVEIDPNEIDPARLDALAEAGMN 164

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEM 189
           R S+GVQ  +++  + +GR         A+ +  AR I+  ++ D++Y LP QT  +   
Sbjct: 165 RASIGVQDFDDEIQKTIGRIQGYDVTRDAVEMIRARGIY-SLNADILYGLPHQTRARMTE 223

Query: 190 ELQRALSYAVDHLSLY 205
            +Q+ LS   D ++LY
Sbjct: 224 SVQKLLSLNPDRVALY 239


>gi|224419278|ref|ZP_03657284.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|313142780|ref|ZP_07804973.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|313131811|gb|EFR49428.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
          Length = 406

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 11/190 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC+  C YC FN  + +    +  F +S   EM  +++L      ++I+ GGGT
Sbjct: 48  LYIHIPFCMTLCTYCSFNRFLFQEDKAKAYF-KSLRKEMLMVKELG--YDFNAIYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P+ +   LD +AK  ++ S  E++ E++P+ + +   + + K  ++R+S+GVQS 
Sbjct: 105 TSIM-PKELCETLD-LAK--SLFSIKEVSCESDPNHLHLEELEMF-KGRIDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  LR +GR     +  E I  +  A  + P ++ DLI+  P QT      +L+     
Sbjct: 160 DDGILRKVGRYEKFGSGEEVIKKLQKAIGVLPILNVDLIFNFPNQTKEMLAKDLEIIKEL 219

Query: 198 AVDHLSLYQL 207
             + ++LY L
Sbjct: 220 KPEQVTLYPL 229


>gi|57168858|ref|ZP_00367988.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli RM2228]
 gi|305431991|ref|ZP_07401158.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli JV20]
 gi|57019694|gb|EAL56380.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli RM2228]
 gi|304445075|gb|EFM37721.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli JV20]
          Length = 451

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 26/284 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
           + +L +Y H PFC   C +C  N      +  +E +++    E+  +  +    R +  +
Sbjct: 43  NKALSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLKYLFQELDILSTIIDTKREVVQM 102

Query: 75  FFGGGTPSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            FGGGTP+    + + +LIL   +     + + EI+ E +P  +         K G NRI
Sbjct: 103 HFGGGTPTFFSAKQLESLILKIKSVFGNFTKDAEISCEIDPRFLNEEQADVLTKNGFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A+ L R+     ++ DLIY LP Q++  +   L+
Sbjct: 163 SFGVQDFDERVQKEIHRIQPFELTQNALKLVRDRGIKSVNMDLIYGLPFQSLQSFAKTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           +A+    D L+++       ++K      M K  +  LPS +V +++    +   + +G 
Sbjct: 223 KAMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLTQNGY 277

Query: 249 ------HAYEISNHSFLGAE--SLHNLNYWRY-----GDYIGIG 279
                 H  +  +  F   E  +LH  N+  Y      D IGIG
Sbjct: 278 KMIGMDHFAKEEDELFKALENGTLHR-NFQGYTTKDGADLIGIG 320


>gi|330876057|gb|EGH10206.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 460

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E++ +     P + +  +  G
Sbjct: 54  LSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIRMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++T+    + +  IE +P   +       R+ G NR+SL
Sbjct: 114 GGTPTFLSHDELRRLMARLRTHFTLLEDDSGDYGIEIDPREADWATMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEDTRAIVEAARTLQFRSVNIDLIYGLPRQTPQGFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|330964660|gb|EGH64920.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 460

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +YVH PFC   C YC  N  + + +   + ++Q    E++ +     P + +  +  G
Sbjct: 54  LSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIRMLACHLAPGQVVEQLHLG 113

Query: 78  GGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++  +  ++T+    + +  IE +P   +       R+ G NR+SL
Sbjct: 114 GGTPTFLSHDELRRLMARLRTHFTLLEDDSGDYGIEIDPREADWATMGLLRELGFNRVSL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+    R + R  +  +  A +  AR + F  ++ DLIY LP+QT   +   +   
Sbjct: 174 GVQDLDPTVQRAINRMQSLEDTRAIVEAARTLQFRSVNIDLIYGLPRQTPQGFSRTVDEI 233

Query: 195 LSYAVDHLSLY 205
           +    D LS++
Sbjct: 234 IELQPDRLSVF 244


>gi|332293013|ref|YP_004431622.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171099|gb|AEE20354.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 453

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
           S  + +Y+H P+C   C +C  N  + +    +  +IQS L E+     L G +  I  +
Sbjct: 48  SQGISLYIHLPYCESMCTFCGCNKRITKNHDVEIPYIQSVLKELAMYVTLLGDKPVIKQL 107

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P ++  ++DGI       S  E++ E +P++    + +     G  R+ 
Sbjct: 108 HLGGGTPTFFSPAHLERLMDGIFALTKKVSTFELSFEGHPNNTTKEHLEALYNKGFTRVC 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ       R + R        +A   AR   +  +  D+IY LP QT       + +
Sbjct: 168 YGVQDYNTTVQRAINRVQPYVHVQSATENARTTGYESVGHDIIYGLPFQTQDDVINTINK 227

Query: 194 ALSYAVDHLSLY 205
            +S   D ++ Y
Sbjct: 228 TISLEPDRIAFY 239


>gi|288941149|ref|YP_003443389.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
 gi|288896521|gb|ADC62357.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
          Length = 461

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 5/232 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRS 70
           + +    L +Y H PFC   C YC  N    + +     +++    E++    L    R 
Sbjct: 47  SNESGRPLSLYFHIPFCDTVCFYCACNKIATKDRSLAPPYLERVYRELEMQSALFDKSRV 106

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKA 128
           +  + +GGGTP+ +    +  ++D   +++T++ +   E +IE +P   + +  +  R+ 
Sbjct: 107 VEQLHWGGGTPTFLSHDQMVELMDVTRRHFTLADDETGEFSIEIDPREADASTVKLLRRI 166

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ  +E+    + R    ++ +  +  A    F   S DLIY LP Q++  +
Sbjct: 167 GFNRMSLGVQDFDERVQAAVNRFQTEAQTMTVLEAALAEGFRSTSIDLIYGLPFQSVESF 226

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
              L+R +      LS++         F    +  +  LP+  V +D+   T
Sbjct: 227 MKTLERVIEVNPQRLSVFNYA-HLPERFKPQRRINEADLPAPQVKLDILQST 277


>gi|169824932|ref|YP_001692543.1| coproporphyrinogen III oxidase [Finegoldia magna ATCC 29328]
 gi|167831737|dbj|BAG08653.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ATCC 29328]
          Length = 435

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 4/233 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y++ PFC  +C YC F + V +    +E ++   L E+    +      I +I+ GGG
Sbjct: 125 NIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEASKSIDKYKIKTIYVGGG 184

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ ++   +  +L  I + +   + +E T EA    S++ +  +  RK  V RISL  Q
Sbjct: 185 TPTSLDYTMLEKLLKAIEECFVSENLLEYTFEAGREDSLDFDKLKLLRKYNVTRISLNPQ 244

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  E++L+ +GR  N    I     A+++   ++ D I  L    +   +  L+      
Sbjct: 245 TFNEKALKAMGRIQNNENLIDLYTQAKDLGFVINMDFILGLLYDDVNNTKKNLEILSRLQ 304

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            D+++ + L+I+ G+ + + +   +     EN+A     L +  TS +    Y
Sbjct: 305 PDNITFHTLSIKNGSKYSQRYDKENF---EENIAEKQMQLVKKWTSQNNYSPY 354


>gi|86153005|ref|ZP_01071210.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|121612219|ref|YP_001000671.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|85843890|gb|EAQ61100.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87249310|gb|EAQ72271.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 81-176]
          Length = 451

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+       QN+ L +  +  N+  S + EI+ E +P  +         + G NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDAEISCEIDPRFLNGEQATVLTQNGFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++L R+     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|89255387|ref|NP_659743.2| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|89213341|gb|AAM54757.2| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 450

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 44  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R 
Sbjct: 104 VHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPVIDALAENGVDRA 163

Query: 134 SLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +   +  ++ L        A+A +  A      ++FDLIY LPKQT+
Sbjct: 164 SLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAG--VSSINFDLIYGLPKQTV 215


>gi|27367957|ref|NP_763484.1| coproporphyrinogen III oxidase [Vibrio vulnificus CMCP6]
 gi|27359530|gb|AAO08474.1| Radical SAM family protein HutW [Vibrio vulnificus CMCP6]
          Length = 457

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 8/213 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           +Y+H PFC  +C +C+F  N+  R+   G   + ++ L E+     L   +S    +++ 
Sbjct: 65  LYIHIPFCRVRCTFCNFFQNAASRQLVDG---YFEALLKEIAIKSALPWTQSGVFHAVYV 121

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P  +  + + I  ++ +S++ EIT+E   +      + G  K G NR S G
Sbjct: 122 GGGTPTDLSPAQVRQLGEAIRSHFPLSADCEITLEGRINRFSDEMYDGAMKGGFNRFSFG 181

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +    R   R  +  + +  +  LA      +  DL+Y LP QT      +L   +
Sbjct: 182 VQSFDTLVRRSAKRLDDREKVLTRLSELASYDQAPVIVDLLYGLPHQTRDILLQDLNDFI 241

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           S     L LYQL +        + + G L  P+
Sbjct: 242 STGAHGLDLYQLVVGGSAPMLNLVEKGKLPPPA 274


>gi|327539591|gb|EGF26200.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopirellula
           baltica WH47]
          Length = 206

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 7/152 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFN--SHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS 72
           N LG+Y+H PFC K+C +C F   + V+  +V  + ++ +   E+  + QL   G R   
Sbjct: 56  NPLGLYLHIPFCRKRCKFCYFKVFTDVKAQEV--QRYVDALCNEISMVSQLPVMGDRPFR 113

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVN 131
            ++FGGGTPS + P+ +  + D + ++ T     E+T E  P ++     +  R+  GV 
Sbjct: 114 FVYFGGGTPSFLSPKQLTKLADRLREHITWDGAEEVTFECEPGTLSETKVKTLREQLGVT 173

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
           R+SLG+++  ++ L   GR H + +    + +
Sbjct: 174 RLSLGIENFSDKLLEENGRAHLSKQVFLGVGM 205


>gi|218515485|ref|ZP_03512325.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 413

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 44  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R 
Sbjct: 104 VHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDRA 163

Query: 134 SLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +   +  ++ L        A+A +  A      ++FDLIY LPKQT+
Sbjct: 164 SLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAG--VSSINFDLIYGLPKQTV 215


>gi|86361248|ref|YP_473135.1| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|86285350|gb|ABC94408.1| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 450

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
           +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    + ++
Sbjct: 45  AGPVSVYLHVPFCRSMCWYCGCHTTITRQDAPVADYLDVMSQEIELVSFAAGNDVPVKNV 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++ PQ  + ++  +   +   ++  + +E +P ++     +   + GV+R S
Sbjct: 105 HFGGGTPTIMRPQEFSALMAKLRSAFAFEADAGVAVEIDPRTLAAPMIEALAENGVDRAS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQW------ 187
           LGVQS +      + R  +  +   A + L  +    ++FDLIY LPKQT+         
Sbjct: 165 LGVQSFDPVVQAAINRLQSFEQTETAVVGLRSSGVSSINFDLIYGLPKQTVQSCIETVRL 224

Query: 188 --EMELQRALSYAVDHLSLY---QLTIEKGTL 214
             E+  +R   +   H+  +   Q  I++ TL
Sbjct: 225 AAELRPERFAVFGYAHIPAFKKHQRLIDESTL 256


>gi|269139140|ref|YP_003295841.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
 gi|267984801|gb|ACY84630.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
 gi|304559064|gb|ADM41728.1| Radical SAM family protein HutW [Edwardsiella tarda FL6-60]
          Length = 466

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           VYVH PFC   C +C F         V RY   + +E  ++S L   Q     + P  I 
Sbjct: 56  VYVHIPFCATHCTFCGFYQNRFSEQAVARYCDYLQREIALESALPLQQ-----SAP--IH 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTPS +  + +  ++  +     ++++ EIT+E    + +         AG NR
Sbjct: 109 AIYLGGGTPSALSAEQLYRLITQLRSALPLAADGEITVEGRVLNFDDARIDACLAAGANR 168

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            S+G+Q+ + +  + +GR  +   AIA +  LA      +  DL++ LP QT  +W+ +L
Sbjct: 169 FSIGIQTFDTRLRQRMGRRADRDRAIAFLRALAERDRAAVICDLMFGLPGQTAREWQNDL 228

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYK 217
                  +D + LY L +   T   K
Sbjct: 229 DIVNDLPLDGVDLYALNLLPSTPLAK 254


>gi|313200615|ref|YP_004039273.1| oxygen-independent coproporphyrinogen iii oxidase [Methylovorus sp.
           MP688]
 gi|312439931|gb|ADQ84037.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           MP688]
          Length = 464

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 2/201 (0%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL- 65
           +E   +      + +Y H PFC   C YC  N    R     E +++  L EM  +    
Sbjct: 38  HELQASRDSGRDISLYAHIPFCDTLCYYCGCNMVATRDYSKAERYLEVLLQEMALVADTA 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +  R +  + +GGGTP+ ++P ++  +    A  + ++ + EI  E +P  +   +    
Sbjct: 98  SADRLVRQMHWGGGTPTYLKPDDLVKLHQAFAGRFRMADDAEIGCEMDPRELSRAHVDAL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
              G NR+SLGVQ L+ Q    + R  +           R+     ++FDLI  LP QT 
Sbjct: 158 ASCGFNRLSLGVQDLDPQVQEAINRIQSQDLIEQVYGWIRDAGINSINFDLIIGLPHQTP 217

Query: 185 TQWEMELQRALSYAVDHLSLY 205
            ++   L   ++ A D L+++
Sbjct: 218 ERFAHTLDAVIAMAPDRLAVF 238


>gi|167563444|ref|ZP_02356360.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis EO147]
          Length = 483

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
           L VY+H PFC   C +C  N  + +       ++   + EM+ +    G  R  + +  G
Sbjct: 79  LSVYLHLPFCESLCYFCACNKIITQDHSRTSAYVDYLIREMELVAPHLGRDRVTTQLHLG 138

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+      +A ++  +  ++  + + E+ +E +P +V+ +  Q   + G NR S GV
Sbjct: 139 GGTPTFFAIDELARLMRALRSHFDFAPHAELGVEIDPRTVDAHTLQALAELGFNRTSFGV 198

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R         A+  +R + F  ++ DLIY LP+QT   +   L   + 
Sbjct: 199 QDFDPSVQEAVHRIQPLPMVEHALAASRASGFESINIDLIYGLPRQTPESFSRTLDEVIR 258

Query: 197 YAVDHLSLY 205
            + D +++Y
Sbjct: 259 LSPDRIAVY 267


>gi|242309881|ref|ZP_04809036.1| coproporphyrinogen III oxidase [Helicobacter pullorum MIT 98-5489]
 gi|239523882|gb|EEQ63748.1| coproporphyrinogen III oxidase [Helicobacter pullorum MIT 98-5489]
          Length = 427

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 11/190 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC+  C YC FN  + +    +  F +S   EM  +++L      ++I+ GGGT
Sbjct: 48  LYIHVPFCMTLCTYCSFNRFLFQEDKAKAYF-ESLRKEMLMVKELG--YDFNAIYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P+ +   LD     + +    E++ E++P+ + +   + + K  ++R+S+GVQS 
Sbjct: 105 TSIM-PEELCKTLDLAKSLFDIK---EVSCESDPNHIHLEELEMF-KGRIDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ +GR     +  E I  +  A  + P ++ DLI+  P QT      +L+   + 
Sbjct: 160 DDGILKKVGRYDKFGSGEEVIKKLQKAIGVLPILNVDLIFNFPNQTQEMLAKDLEIIKAL 219

Query: 198 AVDHLSLYQL 207
             + ++LY L
Sbjct: 220 KPEQVTLYPL 229


>gi|297580034|ref|ZP_06941961.1| hutW protein [Vibrio cholerae RC385]
 gi|297535680|gb|EFH74514.1| hutW protein [Vibrio cholerae RC385]
          Length = 455

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 6/240 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +L   +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLHDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P+       LY +     + H L    + NH
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV-NH 303


>gi|13926030|gb|AAK49511.1|AF321091_1 oxygen-independent coproporphyrinogen III dehydrogenase
           [Pseudomonas putida]
          Length = 461

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 20/291 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +   L   +++ 
Sbjct: 49  KAQRPLSLYVHVPFCANICYYCACNKVITKDRGRAQPYLQRLEQEIQLIACHLDPAQTVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + FGGGTP+ +    +  ++  + K++ +    + +  IE +P   + +     R+ G 
Sbjct: 109 QLHFGGGTPTFLSHDELRQLMAHLRKHFNLLNDDSGDYGIEIDPREADWSTMGLLRELGF 168

Query: 131 NRISLGVQSLEE--QSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           NR+S  +Q L+    S+R +       +  A I  AR + F  ++ DLIY LPKQT   +
Sbjct: 169 NRVSKNLQDLDPAGASVRSIA-CKVWKKPRAVIDAARTLQFRSINIDLIYGLPKQTPDNF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSAH 246
           +  ++  +S   D LS++         F    +   L LPS    +++   T + +T+A 
Sbjct: 228 DRTVEEVISLQPDRLSVFNYA-HLPERFMPQRRINSLDLPSPAHKLEMLQRTIEQLTAAG 286

Query: 247 ----GLHAYEISNHSFLGAESLHNLN-----YWRYG--DYIGIGPGAHSRV 286
               G+  + + +     A+  H L      Y  +G  D IG+G  A S++
Sbjct: 287 YRYIGMDHFALPDDELAIAQEEHTLQRNFQGYTTHGHCDLIGLGVSAISQI 337


>gi|91787105|ref|YP_548057.1| coproporphyrinogen III oxidase [Polaromonas sp. JS666]
 gi|91696330|gb|ABE43159.1| oxygen-independent coproporphyrinogen III oxidase [Polaromonas sp.
           JS666]
          Length = 462

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 33/307 (10%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIF 75
             L +Y+H PFC   C YC  N  + ++      +++    E+       G  + ++ + 
Sbjct: 55  QPLSLYLHIPFCESLCYYCACNKIITKHHERAATYLRYLSREVDLHTARLGLEQPVTQLH 114

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  ++  + +++ +    E +IE +P +V+        + G NRIS 
Sbjct: 115 LGGGTPTFLSDAELGELMAMLRRSFALVPGGEYSIEIDPRTVDGARLATLAELGFNRISF 174

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    + + R   A +  A +  AR I F  ++ DLIY LP+QT   +   L + 
Sbjct: 175 GVQDFDPDVQKAVHRIQPAEQVFALMEQARAIGFDSVNIDLIYGLPRQTPESFARTLAQV 234

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                D ++LY         F    +     LP    A  L  L+QS++      A+E +
Sbjct: 235 QQLRPDRIALYAYA-HLPERFKPQRRIVSAELP--GAAAKLAMLSQSLS------AFEAA 285

Query: 255 NHSFLGAE----------------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
            + ++G +                 LH  N+  Y      D IG+G  A  R+     + 
Sbjct: 286 GYVYIGMDHFALPGDALAVAKRQGRLHR-NFQGYSTQPDCDLIGLGVSAIGRIGATYSQN 344

Query: 294 AISIEKH 300
           A ++E++
Sbjct: 345 AKTMEEY 351


>gi|114320528|ref|YP_742211.1| oxygen-independent coproporphyrinogen III oxidase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226922|gb|ABI56721.1| oxygen-independent coproporphyrinogen III oxidase [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 478

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFG 77
           L +YVH PFC   C YC  N  +         ++     E+    QL    R +  + FG
Sbjct: 71  LSLYVHVPFCDTVCFYCACNKIITGNYSRAGTYLDYLEKEVALQSQLFDADRRVEQLHFG 130

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +  +++  ++D +++ +T+      E +IE +P +V     +   K G NR+S+
Sbjct: 131 GGTPTYLSDEDLIRVMDMLSRYFTLERGPQREFSIEIDPRAVRETTIELLAKLGFNRMSV 190

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    + + R          I  AR+  F   + DLIY LP Q++  +   L + 
Sbjct: 191 GVQDFDPAVQKAVNRIQPYETTARVIAKARSCGFRSTNLDLIYGLPLQSVETYSRTLDQT 250

Query: 195 LSYAVDHLSLY 205
           L    + L++Y
Sbjct: 251 LELRPERLAVY 261


>gi|167720827|ref|ZP_02404063.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei DM98]
          Length = 464

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 4/197 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G  ++ L +Y H PFC   C YC  N    R +     ++     E+     L  P R++
Sbjct: 52  GASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIALQAALFDPERTV 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ +       ++    + +T++S+   E +IE +P +         R  G
Sbjct: 112 TQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTASPATLVHLRTIG 171

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ       R + R          +  AR   +  +  DLIY LP QT++ + 
Sbjct: 172 FNRVSLGVQDFGPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIYGLPHQTVSSFA 231

Query: 189 MELQRALSYAVDHLSLY 205
             L   +    D LS++
Sbjct: 232 RTLDTIVELEPDRLSVF 248


>gi|308182845|ref|YP_003926972.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
 gi|308065030|gb|ADO06922.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
          Length = 457

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S +VE++ E +P     ++ 
Sbjct: 99  AMNTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDVEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + RN        ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRNQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|290968829|ref|ZP_06560366.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781125|gb|EFD93716.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 483

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 130/295 (44%), Gaps = 25/295 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
            +Y+  P+C   C YC F S  V    V +   F ++ + +++    L       + SI+
Sbjct: 159 ALYIGIPYCSGHCLYCSFPSRQVTHEPVSRLSRFAEALVKDVEDWAALCAQYDLQVQSIY 218

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +  Q +  +L  + +++  SS  E T+EA  P +  +      R+ GVNRIS
Sbjct: 219 IGGGTPTCLSVQFLQPLLQVVQQHF--SSAGEWTVEAGRPDTATLEKLTLLRRCGVNRIS 276

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++  L  LGRNH   +        R + FP ++ D I  LP+QT+   E  ++ 
Sbjct: 277 VNPQTMQQSLLDRLGRNHRVEDIYDMYEHCRQLGFPVINMDFIAGLPQQTVVDMEENMKI 336

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 ++++++ L ++K    ++ H     + P       +  + +     +G   Y +
Sbjct: 337 VCQLQAENVTIHTLALKKSAPLFQ-HPLRQYI-PEAATVEKMLAICRQYLRHNGYIPYYM 394

Query: 254 SNHSFLGAESLHNLNYWRYG--------------DYIGIGPGAHSRVKVGSHRVA 294
               ++ A +  N+ Y R G                +  GPG  ++   G + +A
Sbjct: 395 YRQKYM-ATNFANIGYARPGTISTYNIEMMEERQTVLAAGPGGATKFLTGPYSLA 448


>gi|257455132|ref|ZP_05620370.1| oxygen-independent coproporphyrinogen III oxidase [Enhydrobacter
           aerosaccus SK60]
 gi|257447465|gb|EEV22470.1| oxygen-independent coproporphyrinogen III oxidase [Enhydrobacter
           aerosaccus SK60]
          Length = 492

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           + +Y H PFC   C YC  N  + +      +++     E++  R L  G   +  + FG
Sbjct: 86  VSLYFHIPFCRHLCYYCGCNKIITKKNSDSGDYLAYLFAEIRHKRSLMQGDPIVEQVHFG 145

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  + + +   +T S     + +IE +P  +     +  R  G NR+S 
Sbjct: 146 GGTPTFLTDDELVKLWNFLQTQFTFSDKPTADYSIEIDPRELRPTTLEILRGLGFNRVSF 205

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+E+    + R  +       +  AR + F  ++ DLIY LP QT+      ++R 
Sbjct: 206 GVQDLQEKVQIAVNRVQSEEMIQGVMTEARRLGFHSINIDLIYGLPHQTVDSMRNTVERI 265

Query: 195 LSYAVDHLSLY 205
           +  + D LS++
Sbjct: 266 IDISPDRLSVF 276


>gi|190894294|ref|YP_001984588.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
 gi|218510459|ref|ZP_03508337.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
 gi|190699955|gb|ACE94038.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
          Length = 450

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 44  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R 
Sbjct: 104 VHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDRA 163

Query: 134 SLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +   +  ++ L        A+A +  A      ++FDLIY LPKQT+
Sbjct: 164 SLGVQSYDPIVQAGIKRLQSFEQTERAVAGLRSAG--VSSINFDLIYGLPKQTV 215


>gi|167570614|ref|ZP_02363488.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis C6786]
          Length = 483

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
           L VY+H PFC   C +C  N  + +       ++   + EM+ +    G  R  + +  G
Sbjct: 79  LSVYLHLPFCESLCYFCACNKIITQDHGRTSAYVDYLIREMELVAPHLGRDRVTTQLHLG 138

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+      +A ++  +  ++  + + E+ +E +P +V+ +  Q   + G NR S GV
Sbjct: 139 GGTPTFFAIDELARLMRALRSHFDFAPHAELGVEIDPRTVDAHTLQALAELGFNRTSFGV 198

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R         A+  +R + F  ++ DLIY LP+QT   +   L   + 
Sbjct: 199 QDFDPSVQEAVHRIQPLPMVEHALAASRASGFESINIDLIYGLPRQTPESFSRTLDEVIR 258

Query: 197 YAVDHLSLY 205
            + D +++Y
Sbjct: 259 LSPDRIAVY 267


>gi|153952155|ref|YP_001397927.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939601|gb|ABS44342.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 451

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 12/237 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSAILDTKREVVQMHF 104

Query: 77  GGGTPSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+    + + +LIL   +     S + EI+ E +P  +         + G NRIS 
Sbjct: 105 GGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQATVLTQNGFNRISF 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +E+  + + R         A++L R+     ++ DLIY LP Q +  +   L++ 
Sbjct: 165 GVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSLNMDLIYGLPYQNLQSFTQTLEKV 224

Query: 195 LSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 225 MLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|283954543|ref|ZP_06372062.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793947|gb|EFC32697.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 451

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 16/238 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + FG
Sbjct: 46  LSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLAYIFKELDILNTILDTQRQVVQMHFG 105

Query: 78  GGTPSLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGTP+       +++ L +  I +N+  S + EI+ E +P  +         + G NRIS
Sbjct: 106 GGTPTFFSAKQLESLILKIKSIFRNF--SKDAEISCEIDPRFLNEEQAAVLTQNGFNRIS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  +E+  + + R         A++L RN     ++ DLIY LP Q +  +   L++
Sbjct: 164 FGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQTLEK 223

Query: 194 ALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +    D L+++       ++K      M K  +  LPS +V +++    +   S +G
Sbjct: 224 VMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCEKFLSKNG 276


>gi|110637552|ref|YP_677759.1| coproporphyrinogen III oxidase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280233|gb|ABG58419.1| O2-independent coproporphyrinogen III oxidase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 459

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 11/230 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFG 77
           + +Y+H P+C   C YC  N+ +      +  +I+S L E +    L   + I + +  G
Sbjct: 62  ISLYIHLPYCESLCTYCGCNTRITVNHAVEMPYIKSVLKEWKLYLNLFKEKPILTELHLG 121

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P N+  ++  I  +  +  +   + E +P++    +     + G +R+S G+
Sbjct: 122 GGTPTFFHPDNLEFLIRSILCDCIIPEHTSYSFEGHPNNTTKEHLDILYRLGFSRVSFGI 181

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +      + R       +     AR I +  +++DL+Y LP QT+      + ++++
Sbjct: 182 QDFDLHVQEIINRVQPLENVVRVTEEARAIGYTSINYDLVYGLPLQTLAGITDTISKSIA 241

Query: 197 YAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              D ++ Y       ++ G       K  +L LP + V   LY   +++
Sbjct: 242 LTPDRIAFYSYAHVPWLKPG-----QRKYTELDLPDDEVKRALYEAGKAL 286


>gi|327191649|gb|EGE58657.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CNPAF512]
          Length = 450

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 44  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R 
Sbjct: 104 VHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDRA 163

Query: 134 SLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +   +  ++ L        A+A +  A      ++FDLIY LPKQT+
Sbjct: 164 SLGVQSYDPIVQAGIKRLQSFEQTERAVAGLRSAG--VSSINFDLIYGLPKQTV 215


>gi|294675410|ref|YP_003576026.1| coproporphyrinogen dehydrogenase [Prevotella ruminicola 23]
 gi|294471993|gb|ADE81382.1| coproporphyrinogen dehydrogenase [Prevotella ruminicola 23]
          Length = 454

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 8/235 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           N +  Y+H PFC   C YC  NS+ +      + ++++   E+  + + ++  R IS I 
Sbjct: 46  NQISFYLHIPFCRHLCHYCGCNSYPQAKPEVVKAYVEALHKEIDLVAKHISDDRQISQIH 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNR 132
           +GGG+P+ +    IA+I +      +++  +E   I IE +P  ++ N++Q     G  R
Sbjct: 106 YGGGSPTALP---IAMIKELNEHLLSIAPTIERPEIAIECHPGYLDANDWQQLTACGFTR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            SLGVQ L  + L+ + R  +       + +       ++ D +Y LP QT+  +   ++
Sbjct: 163 YSLGVQDLRPEVLKVVNRRESMMPVGEILEMLHESGATVNLDFLYGLPLQTIDSFRNTIE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +A ++  D L  +        LF +      + LP+      +Y     + +A G
Sbjct: 223 QAAAWRPDRLVTFSYA-HLPKLFPRQQILDKVGLPANQEKNGMYETATEVLTAAG 276


>gi|299132110|ref|ZP_07025305.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
 gi|298592247|gb|EFI52447.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
          Length = 457

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
            ++ +Y+H PFC   C YC  N+ + R       ++ +   E++ +    G R  + ++ 
Sbjct: 53  KTVSLYLHIPFCQSMCWYCGCNTTIVRRNEPVAEYLAALSQEIERVTDHIGQRLKVGAVH 112

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+++ P   + ++  + + +   S+ EI IE +P  +           G+ R SL
Sbjct: 113 FGGGTPTIMTPDQFSDLMTVLRQKFNFLSDAEIAIEIDPRRLTREMSLALGANGITRASL 172

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +    + + R  +  +  A     R      ++FDLIY LP QT+      +Q+ 
Sbjct: 173 GVQSFDPAVQQAVNRIQSFEDTAAVTEGLRAAGINSINFDLIYGLPHQTVASCFDTVQKC 232

Query: 195 LSYAVDHLSLY 205
           +    D  +++
Sbjct: 233 MQLRPDRFAVF 243


>gi|5678643|gb|AAD46692.1|AF040988_7 oxygen-independent coproporphyrinogen III oxidase [Pseudomonas sp.
           G-179]
 gi|3925398|gb|AAC79446.1| anaerobic coproporphyrinogen III oxidase [Pseudomonas sp. G-179]
          Length = 450

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI 74
           + + +YVH PFC   C YC  ++ +        +++     E+  +     PR   I++I
Sbjct: 46  DPISLYVHIPFCRSMCWYCGCHTTITLKDQPILDYLDVLKREISLVADAM-PRKPEIATI 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++EP     +   +   +      E+ +E +P  +         KAGV R S
Sbjct: 105 HFGGGTPTIMEPNEFLDLDFHLRSRFAFVEKTELAVEIDPRPLTDEMICALGKAGVTRAS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS + +  + + R   A +  AA    R      ++FDLIY LP QT+       + 
Sbjct: 165 LGVQSFDPKVQKAINRIQTAKQTRAATEGLRAAGVGSINFDLIYGLPHQTVASAIETAET 224

Query: 194 ALSYAVDHLSLY 205
           A+S   D  +++
Sbjct: 225 AISMRPDRFAVF 236


>gi|218671366|ref|ZP_03521036.1| coproporphyrinogen III oxidase [Rhizobium etli GR56]
          Length = 416

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 10  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R 
Sbjct: 70  VHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDRA 129

Query: 134 SLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +   +  ++ L        A+A +  A      ++FDLIY LPKQT+
Sbjct: 130 SLGVQSYDPIVQAGIKRLQSFEQTERAVAGLRSAG--VSSINFDLIYGLPKQTV 181


>gi|158426276|ref|YP_001527568.1| oxygen-independent coproporphyrinogen III oxidase [Azorhizobium
           caulinodans ORS 571]
 gi|158333165|dbj|BAF90650.1| oxygen-independent coproporphyrinogen III oxidase [Azorhizobium
           caulinodans ORS 571]
          Length = 467

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 93/187 (49%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC + C YC   + V R       + +    E+  +  ++ G  +++ + +GGG
Sbjct: 62  IYLHVPFCAELCLYCGCTTSVARRYTPVAAYAERLRGEIARVAERIPGRLAVTHLHWGGG 121

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+   ++  +++ + +++ V  + E+ IE +P  +  +  +    +G+ R SLGVQ 
Sbjct: 122 TPTLLAGGDMIALMESVRRHFDVKPHAELAIEVDPRVLSTDMVEALAASGITRASLGVQD 181

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +      +GR  +  E   A    R      ++ DLIY LP QT+      ++ ALS  
Sbjct: 182 FDPAVQAAIGRMQSFEETARAADALRRAGIGSLNLDLIYGLPHQTLESVLRTVRTALSLD 241

Query: 199 VDHLSLY 205
            D ++++
Sbjct: 242 PDRIAVF 248


>gi|330829949|ref|YP_004392901.1| Coproporphyrinogen III oxidase [Aeromonas veronii B565]
 gi|328805085|gb|AEB50284.1| Coproporphyrinogen III oxidase, putative [Aeromonas veronii B565]
          Length = 456

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 25/280 (8%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--S 72
           +Y+H PFC K+C +C+F       + + RY       + +  T +         +S+  S
Sbjct: 61  LYIHIPFCRKRCSFCNFFENGANPARINRY-------VNALCTSLAQAADTPLAQSMPFS 113

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +    +A+ L  + + + ++++ E+T+E   +  +   +Q     G NR
Sbjct: 114 AVYVGGGTPTDMSADELAM-LAAVIRRFPLAADAEVTLEGRLNGFDDEKWQVALAGGFNR 172

Query: 133 ISLGVQSLE----EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
            S GVQS +    +Q+ RF  R    +       L R+    +  DLI+ LP Q    W+
Sbjct: 173 FSFGVQSFDTRVRQQAARFDDRETLLTRLG---ELTRDDAAVIVADLIFGLPGQDDAVWQ 229

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHG 247
            +++  ++  V  + LYQL   +GT   +  + G L  L        +Y    +   AHG
Sbjct: 230 QDIRDVMASGVHGVDLYQLIAMQGTNLERAQEKGTLDWLADGQQRAAMYAYGGAQLEAHG 289

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRV 286
                 S+     AE S +N    R  + +  G GA   +
Sbjct: 290 WERLSCSHWRRSPAEQSRYNQMAKRGAEILPFGAGAGGSI 329


>gi|315058435|gb|ADT72764.1| Coproporphyrinogen III oxidase, oxygen-independent [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 451

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+     + QN+ L +  +  N+  S + EI+ E +P  +         +   NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDAEISCEIDPRFLNEKQAIVLTQNSFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++L RN     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    ++  S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCENFLSKNG 276


>gi|167581228|ref|ZP_02374102.1| coproporphyrinogen III oxidase [Burkholderia thailandensis TXDOH]
 gi|167619315|ref|ZP_02387946.1| coproporphyrinogen III oxidase [Burkholderia thailandensis Bt4]
 gi|257138531|ref|ZP_05586793.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
          Length = 483

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  +  ++  + + E+ +E +P +V+  
Sbjct: 122 VAPDLGRDRVTTQLHLGGGSPTFFAIDELARLMRALRDHFDFAPHAELGVEIDPRTVDER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPAVQEAVHRVQPLPMVERALAASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + D +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPDRIAVY 267


>gi|86750973|ref|YP_487469.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris HaA2]
 gi|86574001|gb|ABD08558.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris HaA2]
          Length = 449

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + +Y+H PFC + C YC  N  +        ++++S + E+  +   + G   +  + FG
Sbjct: 47  ISLYLHVPFCKQMCWYCGCNMKLASKYGPVADYVESLINEIDLVADAMPGTMPVRHLHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++IEP+++  I+  + + +    + E+ IE++P ++         + G  R S GV
Sbjct: 107 GGTPTVIEPEDLGAIMTLLRERFEFVPDAELAIESDPRTLTDEMVAKIGELGFTRASFGV 166

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +    + R         A+   +     R++FDLIY LP QT       +++ + 
Sbjct: 167 QEFDPKVQAAINRIQPPEMVAHAMSRFKAAGVERINFDLIYGLPYQTAEDLRSTVEQCVE 226

Query: 197 YAVDHLSLY 205
              D ++L+
Sbjct: 227 MKPDRVALF 235


>gi|83720202|ref|YP_442332.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|83654027|gb|ABC38090.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           thailandensis E264]
          Length = 481

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  +  ++  + + E+ +E +P +V+  
Sbjct: 120 VAPDLGRDRVTTQLHLGGGSPTFFAIDELARLMRALRDHFDFAPHAELGVEIDPRTVDER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPAVQEAVHRVQPLPMVERALAASRAAG--------FESV 231

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + D +++Y
Sbjct: 232 NIDLIYGLPRQTPASFSRTLDEVIRLSPDRIAVY 265


>gi|182412425|ref|YP_001817491.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
 gi|177839639|gb|ACB73891.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
          Length = 471

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 4/200 (2%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLT 66
           E+N    G  SL  Y H PFC  +C +C   + V R +     ++     EM+    ++ 
Sbjct: 56  EDNTPDAGPLSL--YFHLPFCETRCWFCGCTTVVTRRRESAAEYLDWLGQEMRLTAARMN 113

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R ++ I  GGGTP+   P  +  +   I + +TVS +VE ++E +P  +  ++    R
Sbjct: 114 RARPVTQIHLGGGTPTFFPPDELRRLGTMIRELFTVSPDVEFSVEVDPRRLTFDHVAALR 173

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           + G  R SLGVQ    +    + R    ++   A+   R   F  ++ DLI+ LP QT T
Sbjct: 174 EIGARRASLGVQDTNPEVQLAIHRVQPQAQNQRAVEWLREAGFNSINVDLIHGLPLQTAT 233

Query: 186 QWEMELQRALSYAVDHLSLY 205
            +   +   L+   + L ++
Sbjct: 234 SFGHTIDDVLTLQPERLVVF 253


>gi|260770036|ref|ZP_05878969.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
 gi|260615374|gb|EEX40560.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
          Length = 451

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 14/244 (5%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           +Y+H PFC  +C +C+F  N+  R    G   +  + +TE++    L   +S    +++ 
Sbjct: 63  LYIHVPFCRVRCTFCNFFQNAASRELVDG---YFAALMTELRAKAALPWTQSGVFHAVYV 119

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P  I  +   I   + +SS+ EIT+E   +      F    + G NR S G
Sbjct: 120 GGGTPTDLSPAQIRQLGQAIRHYFPLSSDCEITLEGRTNRFSDEMFDHALEGGFNRFSFG 179

Query: 137 VQS---LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           VQS   L  +S + L       + ++ +   +     +  DL+Y LP QT+  +E +L+ 
Sbjct: 180 VQSFNTLVRRSAKRLDERETVLQRLSDLSATQQA--PIVIDLLYGLPHQTLDVFEQDLRD 237

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYE 252
            L      + LYQL +        + + G L  P+       +Y L  +  + H L    
Sbjct: 238 YLQTGAHGVDLYQLVVGGSAPMLNLVEKGRLPPPATTPDKAAMYELGVNFFARHHLKPLS 297

Query: 253 ISNH 256
           + NH
Sbjct: 298 V-NH 300


>gi|22299263|ref|NP_682510.1| coproporphyrinogen III oxidase [Thermosynechococcus elongatus BP-1]
 gi|22295446|dbj|BAC09272.1| oxygen independent coprophorphyrinogen III oxidase 1
           [Thermosynechococcus elongatus BP-1]
          Length = 460

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           L +YVH PFC   C +C  N  + + +   + ++ +   E+ Q   +L   R +  + +G
Sbjct: 56  LSLYVHIPFCQTACYFCGCNVIITQSQTIAKTYLDALAAEIAQVAARLDRTRPVIQMHWG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  +   + +++ ++++ EI+IE NP  +  +     R  G NRIS G+
Sbjct: 116 GGTPNYLTIDQVESLWRTLTQHFELTNDAEISIEVNPRYINRDYLLRLRNLGFNRISFGL 175

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + Q    + R    +     +   R   F  ++ DLIY LP QT+  +E  + + L 
Sbjct: 176 QDFDPQVQLAVNRVQPETWLFQVMEWIRAAEFESVNIDLIYGLPYQTVQSFEATIAKTLR 235

Query: 197 YAVDHLSLY 205
              D ++++
Sbjct: 236 LDPDRIAVF 244


>gi|315182560|gb|ADT89473.1| coproporphyrinogen III oxidase [Vibrio furnissii NCTC 11218]
          Length = 451

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 14/244 (5%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           +Y+H PFC  +C +C+F  N+  R    G   +  + +TE++    L   +S    +++ 
Sbjct: 63  LYIHVPFCRVRCTFCNFFQNAASRELVDG---YFAALMTELRAKAALPWTQSGVFHAVYV 119

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P  I  +   I   + +SS+ EIT+E   +      F    + G NR S G
Sbjct: 120 GGGTPTDLSPAQIRQLGQAIRHYFPLSSDCEITLEGRTNRFSDEMFDHALEGGFNRFSFG 179

Query: 137 VQS---LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           VQS   L  +S + L       + ++ +   +     +  DL+Y LP QT+  +E +L+ 
Sbjct: 180 VQSFNTLVRRSAKRLDERETVLQRLSDLSATQQA--PIVIDLLYGLPHQTLDVFEQDLRD 237

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYE 252
            L      + LYQL +        + + G L  P+       +Y L  +  + H L    
Sbjct: 238 YLQTGAHGVDLYQLVVGGSAPMLNLVEKGRLPPPATTPDKAAMYELGVNFFARHHLKPLS 297

Query: 253 ISNH 256
           + NH
Sbjct: 298 V-NH 300


>gi|302379634|ref|ZP_07268119.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312541|gb|EFK94537.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna
           ACS-171-V-Col3]
          Length = 435

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 4/233 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y++ PFC  +C YC F + V +    +E ++   L E+  + +      I +I+ GGG
Sbjct: 125 NIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEVSKSIDKYKIKTIYVGGG 184

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ ++   +  +L  I + +   + VE T EA    S++    +  +K  V RISL  Q
Sbjct: 185 TPTSLDYTMLEKLLKAIEECFVSENLVEYTFEAGREDSLDFGKLKLLKKYNVTRISLNPQ 244

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  E++L+ +GR  N    I     A+++   ++ D I  L    +      L+      
Sbjct: 245 TFNEKALKAMGRIQNNENLIDLYTQAKDLGFVINMDFILGLLYDDVNNTRENLETLRKLQ 304

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            D+++ + L+I+ G+ + + +   +     EN+A     L +  TS +    Y
Sbjct: 305 PDNITFHTLSIKNGSKYSQQYDKENF---RENIAEKQMQLVKEWTSHNNYLPY 354


>gi|288942334|ref|YP_003444574.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
 gi|288897706|gb|ADC63542.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
          Length = 428

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 3/206 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL   +        N L +Y+H PFC  +C YC  ++ V       + ++ +   EM  
Sbjct: 16  QYLDVLDTLRQAPDGN-LALYIHVPFCHVRCLYCACDTTVTHSLEKVDQYLDALEREMDM 74

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + +  G R  I  +  GGGTP+ +    +A +++ +  ++ ++     +IE NP    V 
Sbjct: 75  VTERIGRRRPIQQLHVGGGTPNHLNEPQLARLMEIVESHFELAPESCASIECNPRRASVG 134

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +     G  RIS GVQ L     R +GR  + +        AR   F  ++ DL+Y L
Sbjct: 135 QLELIHGLGFERISFGVQDLNLDVQRAIGRVQSLNMVRDVFLTARQTGFESINLDLVYGL 194

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT   ++  L + L    D ++ +
Sbjct: 195 PFQTPRGFQATLDQVLDLGPDRVACF 220


>gi|37676085|ref|NP_936481.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
 gi|37200625|dbj|BAC96451.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
          Length = 459

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 8/213 (3%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFF 76
           +Y+H PFC  +C +C+F  N+  R+   G   +  + L E+     L   +S    +++ 
Sbjct: 67  LYIHIPFCRVRCTFCNFFQNAASRQLVDG---YFAALLKEIAIKSALPWTQSGVFHAVYV 123

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P  +  + + I  ++ +S++ EIT+E   +      + G  K G NR S G
Sbjct: 124 GGGTPTDLSPAQVRQLGEAIRSHFPLSADCEITLEGRINRFSDEMYDGAMKGGFNRFSFG 183

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +    R   R  +  + +  +  LA      +  DL+Y LP QT      +L   +
Sbjct: 184 VQSFDTLVRRSAKRLDDREKVLTRLSELASYDQAPVIVDLLYGLPHQTRDILLQDLNDFI 243

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           S     L LYQL +        + + G L  P+
Sbjct: 244 STGAHGLDLYQLVVGGSAPMLNLVEKGKLPPPA 276


>gi|85707474|ref|ZP_01038553.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
 gi|85668014|gb|EAQ22896.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
          Length = 451

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 4/190 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   +       ++Q+  TE+  + R L     +S + +G
Sbjct: 51  VSLYVHVPFCRRLCWFCACRTQGTQTDAPVIAYLQTLKTEIAMLGRSLPRGVRLSRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  +  +   I      +   E ++E +P+ ++        +AG+NR S+GV
Sbjct: 111 GGTPTLLSPDLMTELAAAIRDIAPFTDATEFSVEIDPNEIDGARLDALARAGMNRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q  +E   + +GR         A+    AR +   ++ D++Y LP Q   +    +Q+ L
Sbjct: 171 QDFDEHIQKSIGRMQGYDITRWAVDEIRARGV-KSLNADILYGLPHQNRARITESVQKLL 229

Query: 196 SYAVDHLSLY 205
           S + D ++LY
Sbjct: 230 SLSPDRVALY 239


>gi|87200582|ref|YP_497839.1| coproporphyrinogen III oxidase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136263|gb|ABD27005.1| oxygen-independent coproporphyrinogen III oxidase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 449

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
             + +Y+H P+C + C YC  N+           ++++   E++ + R L     IS I 
Sbjct: 56  GPVSLYLHIPYCQEICWYCGCNTGAANKTQRLGAYLEALHHEIELVARNLHSSVRISRIA 115

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+ I+P +   ++D +  N+ ++S V ++IE +P S+E   F   R  GV + SL
Sbjct: 116 FGGGSPNAIKPTDFVRLVDRLTVNFRLASPV-LSIELDPRSLEPGWFLAIRGIGVIKASL 174

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+L+ +    +GR         A+  L +     ++FDL+Y LP Q        L ++
Sbjct: 175 GVQTLDPRVQAAIGRVQPREHIERAVDGLRKAGVDSINFDLMYGLPFQDDAILADTLDQS 234

Query: 195 LSYAVDHLSLY 205
           ++   D ++L+
Sbjct: 235 VAMGADRIALF 245


>gi|167625322|ref|YP_001675616.1| coproporphyrinogen III oxidase [Shewanella halifaxensis HAW-EB4]
 gi|167355344|gb|ABZ77957.1| Coproporphyrinogen dehydrogenase [Shewanella halifaxensis HAW-EB4]
          Length = 470

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 7/209 (3%)

Query: 21  VYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC K+C +C+F    ++  R     +N  +    ++     L   R  ++++ G
Sbjct: 58  LYIHIPFCRKRCTFCNFFENGTNPERISRYIKNLTEQL--KIAADTPLAQSRPFNTVYVG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ I    +  + + I + + +  + E+T+E   +  + + +        NR S GV
Sbjct: 116 GGTPTDISSDEVKQLGEAIQR-FPLIDDAEVTLEGRLNGFDDDKWHNATANSFNRFSFGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q  +  GR  +    +  +  L+++    +  DLI+ LP QTM  W+ +LQ  + 
Sbjct: 175 QSFDTQVRQAAGRFDDKDFLLNRLQQLSQHPSGSIVIDLIFGLPGQTMDIWQQDLQAVID 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             V  + LYQL    GT      + G ++
Sbjct: 235 SGVHGVDLYQLIGLSGTRIENAREKGKVL 263


>gi|124515861|gb|EAY57370.1| Oxygen-independent coproporphyrinogen III oxidase [Leptospirillum
           rubarum]
          Length = 459

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
             L +Y H PFC   C +C  ++ + R K    ++I     E+  +  +    R +  + 
Sbjct: 51  KPLSLYFHIPFCEMLCYFCGCSTIISRDKGKAADYIDVLGAEIALLGNRFPKSRKVVQLH 110

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTPS + P    ++   I + + V     EI+IE +P     +  +  R+ GVNRIS
Sbjct: 111 FGGGTPSSLTPAQNRILFSHINRWFDVDYREGEISIEIDPRHASDDYLETVRELGVNRIS 170

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  +    + + R              R + F  ++ DLIY LP QT+  +E  L  
Sbjct: 171 MGVQDFDPVVQKAVNRIQPVELTEKVYRKVRELGFHSINIDLIYGLPFQTVKGFEKTLDE 230

Query: 194 ALSYAVDHLSLY 205
            +  + D L+++
Sbjct: 231 IIRMSPDRLAIF 242


>gi|86131884|ref|ZP_01050481.1| coproporphyrinogen dehydrogenase [Dokdonia donghaensis MED134]
 gi|85817706|gb|EAQ38880.1| coproporphyrinogen dehydrogenase [Dokdonia donghaensis MED134]
          Length = 453

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           + +Y+H P+C   C +C  N  + +    +  +IQS L E+    +L G    +  +  G
Sbjct: 51  ISLYIHLPYCESMCTFCGCNKRITKNHSVEIPYIQSVLKELTLYVKLLGSTPLVKQLHLG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+   P+++  +LDG+      ++  E++ E +P++    + +   K G  R+  GV
Sbjct: 111 GGTPTFFSPEHLDRLLDGVFSLTNKATEFELSFEGHPNNTTKKHLETLYKQGFARVCYGV 170

Query: 138 QSLEEQSLRFLGR---NHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           Q   +   + + R    HN   A  A   AR + +  +  D+IY LP QT       + +
Sbjct: 171 QDYNQNVQKAINRVQPYHNVKTATTA---AREVGYSSVGHDIIYGLPFQTQDDVIFTISQ 227

Query: 194 ALSYAVDHLSLY 205
                 D ++ Y
Sbjct: 228 TTRLRPDRIAFY 239


>gi|296137575|ref|YP_003644817.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
 gi|295797697|gb|ADG32487.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
          Length = 467

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
              + +Y H PFC   C YC  N    +       ++ S   E++ +  L   R  ++ +
Sbjct: 53  DEPVSLYFHVPFCETLCYYCGCNKIPTKNHGRSAPYLDSVEQELRLIAGLLQTRLPVTQL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +  +  A ++    +++ +    E +IE +P  V         + G NR+S
Sbjct: 113 HWGGGTPTFLNDEEAARLMTMTREHFDLQPGGEFSIEIDPRKVNEARVAHLARLGFNRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ    +  + + R  +  E    I  AR N F  +S DLIY LP Q +  +   L +
Sbjct: 173 VGVQDFAPEVQQAVNRIQSVEETRLVIDAARANGFGSISLDLIYGLPLQNLDSFARTLDQ 232

Query: 194 ALSYAVDHLSLY 205
            +  + D LSLY
Sbjct: 233 VIEISPDRLSLY 244


>gi|121604176|ref|YP_981505.1| coproporphyrinogen III oxidase [Polaromonas naphthalenivorans CJ2]
 gi|120593145|gb|ABM36584.1| oxygen-independent coproporphyrinogen III oxidase [Polaromonas
           naphthalenivorans CJ2]
          Length = 463

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 134/320 (41%), Gaps = 20/320 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISS 73
           G+  L +YVH PFC   C +C  N  + +       +++    EM  +    GP R    
Sbjct: 55  GNPPLSIYVHLPFCESLCYFCACNKIITKEHGRVAEYLRYLDKEMALVAAQIGPDRKAVQ 114

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+      +  ++  + +++  + + E+ +E +P +V           G NR 
Sbjct: 115 LHLGGGTPTFFNADELGQLMAMLRRHFDFTPDAELGVEIDPRTVGEGTLAMLAGLGFNRN 174

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +    + + R         A+  +R   F  ++ DLIY LP+QT+  +   L 
Sbjct: 175 SFGVQDFDPAVQQAVNRIQPLEMVEKAVEESRKANFQSINADLIYGLPRQTLESFGRTLD 234

Query: 193 RALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GL 248
             +  A D ++LY    + +     ++  + DL    E + + L ++ + + + +   GL
Sbjct: 235 SLIRVAPDRIALYNYAHLPRRFKAQRLIVEADLPSAEERLQIFLMSMQRLLDAGYVYIGL 294

Query: 249 HAYEISNHSFLGA---ESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
             +   +     A   +SLH  N+  Y      D +G G  A S+V     +   ++  +
Sbjct: 295 DHFSKPDDELNKARLNKSLHR-NFQGYTTRAECDLVGFGVSAISKVGNSYSQSVRTVNAY 353

Query: 301 PESWLKMVRKNGHAVVEKEF 320
            E         GH  +EK F
Sbjct: 354 YEHL-----DQGHLPIEKGF 368


>gi|167749835|ref|ZP_02421962.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
 gi|167657147|gb|EDS01277.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
          Length = 480

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 106/209 (50%), Gaps = 7/209 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRS--ISSIF 75
           + +Y+  PFC  +C YC F S      +   +++    L E+     +    S  + +++
Sbjct: 158 ISLYISIPFCPSRCSYCSFISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTVY 217

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +    +  +++ + + + +++  E T EA  P ++  +  +  +  GV RIS
Sbjct: 218 IGGGTPTTLSASQLDSLIEKLGE-FDIANIREFTAEAGRPDTITEDKLRALKNGGVRRIS 276

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS+ +  L  +GR H   +   A  +AR + F  ++ D+I  LP +T   +E  LQ+
Sbjct: 277 INPQSMNDSVLEAVGRRHTVKQVCEAFDIARKVGFDCINSDIIAGLPAETERSFEDSLQQ 336

Query: 194 ALSYAVDHLSLYQLTIEKGT-LFYKMHKD 221
               + ++++++ L++++ + LF +   D
Sbjct: 337 LCKLSPENITVHTLSLKRSSALFCRFGDD 365


>gi|307730728|ref|YP_003907952.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
 gi|307585263|gb|ADN58661.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
          Length = 461

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 162/392 (41%), Gaps = 44/392 (11%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFN-------SHVRRY--KVGQENFIQ 53
           YL A  +   G  +  L +Y H PFC   C YC  N       +H R Y  ++ +E  +Q
Sbjct: 41  YLRAAAD--PGASALDLSLYFHIPFCDTVCFYCGCNKIATKNRAHARPYLERLKREIVLQ 98

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIE 111
           +   + +        R +S +  GGGTP+ +    +A +L    +++    +   E +IE
Sbjct: 99  AACFDTR--------RPVSQLHLGGGTPTFMSNDELAELLATAREHFAFVPDDEAEYSIE 150

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
            +P           RK G NR+SLGVQ  +    + + R        + +  AR+  F  
Sbjct: 151 VDPREASPETIAHLRKLGFNRLSLGVQDFDPLVQKAINRIQPLDMTASVMQAARHAGFHS 210

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD---LVLP 227
           +  DLIY LP QT+  +   L   +  A D LS++          +KM +  D   L  P
Sbjct: 211 IGVDLIYGLPHQTVESFSRTLDTMIELAPDRLSVF--AYAHMPQLFKMQRRMDAATLPSP 268

Query: 228 SENVAVDLYNLTQSITSAH----GLHAYEISNHSFLGAESLHNL--NYWRYG-----DYI 276
           +  +A+ L  + + +++A     G+  + +       A++   L  N+  Y      D I
Sbjct: 269 AMRLAI-LQRVVERLSTAGYVYIGMDHFALPTDELARAQAQRTLHRNFQGYSTRAECDLI 327

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G   GA S  KVG   V     K   ++   +     A+     LS++ +    ++  L 
Sbjct: 328 GF--GASSIGKVGD--VYAQNAKELPAYAAAIDAGKLAITRGVRLSADDRLRRDIITQLM 383

Query: 337 LREGISVKDWEMLAGRNLDIECERNLQR-QGF 367
               +   ++E + G +     E  L+R +GF
Sbjct: 384 CNLELRFDEFEAMYGIHFADTFEPELERLRGF 415


>gi|120556010|ref|YP_960361.1| coproporphyrinogen III oxidase [Marinobacter aquaeolei VT8]
 gi|120325859|gb|ABM20174.1| oxygen-independent coproporphyrinogen III oxidase [Marinobacter
           aquaeolei VT8]
          Length = 469

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           + +Y H PFC   C YC  N  + + +     +++  L E     +L G  R +  + +G
Sbjct: 63  ISLYTHLPFCAHLCYYCACNKVITKKRDKAMPYVERVLKEAAIQSKLFGADRPVKQLHWG 122

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +  ++ G  + + + S  + + ++E +P  V+ +      + G NRISL
Sbjct: 123 GGTPTFLPRDVMQHLMAGYGELFNLQSGDDRDYSVEIDPREVDEDTLSTLWELGFNRISL 182

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ +  +  + + R        + ++ AR+I F  ++ DLIY LP QT   +   L+  
Sbjct: 183 GVQDVNPEVQKAVNRIQPRDMTESVLNEARHIGFRSINLDLIYGLPYQTPESFAETLESV 242

Query: 195 LSYAVDHLSLY 205
           +  + D LS++
Sbjct: 243 IEMSPDRLSVF 253


>gi|90407199|ref|ZP_01215386.1| coproporphyrinogen III oxidase [Psychromonas sp. CNPT3]
 gi|90311622|gb|EAS39720.1| coproporphyrinogen III oxidase [Psychromonas sp. CNPT3]
          Length = 392

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 16/269 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N  + R++   + ++     E++        R ++ + +GGGTP+ + P  I+ 
Sbjct: 1   CYFCGCNKIITRHQEKADVYLDHLEQEIKLQAPHFKNRLVTQLHWGGGTPTFLLPAQISR 60

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           ++D +  +++ +   E++IE +P   E++      K G NR+SLGVQ   +   + + R 
Sbjct: 61  LMDILRAHFSFAKGAELSIEVDPRKFELSTIDLLAKEGFNRLSLGVQDFNKAVQKAINRE 120

Query: 152 HNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            + +     +  A+   F   + D+IY LP QT   +   L + L      LS++     
Sbjct: 121 QDEAFIEQLLQRAKEQGFQSTNLDMIYGLPLQTKDTFAHTLNKVLELDPARLSIFNYA-H 179

Query: 211 KGTLFYKMHK--DGDLVLPSENVAVDLYN---LTQSITSAHGLHAYEISNHSFLGAE--- 262
             ++F    K  D D+  P+E +A+  Y    LTQS     G+  +   +     A+   
Sbjct: 180 MPSIFAAQRKINDEDMPKPAEKLAMLQYTIEFLTQSGYQFIGMDHFAKPDDELAIAQREG 239

Query: 263 SLHNLNYWRY-----GDYIGIGPGAHSRV 286
           +LH  N+  Y      D +G+G  A S++
Sbjct: 240 TLHR-NFQGYTTQEDADLLGLGVSAISQI 267


>gi|296282511|ref|ZP_06860509.1| coproporphyrinogen III oxidase [Citromicrobium bathyomarinum JL354]
          Length = 437

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 5/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI 74
             + +Y+H PFC + C YC  N+     +   E+++++   E++ +  L  PR   +  I
Sbjct: 42  GDVSLYLHIPFCEQICFYCGCNTGKANKRKRLESYLRALHREIETVAALL-PRGTRVRRI 100

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+ I P     ++D +   + +   V  +IE +P ++     Q     GV R S
Sbjct: 101 AFGGGSPNAIAPVEFLRLIDALTIQFEIDDPV-FSIELDPRTMSREWAQVLAAVGVERAS 159

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  E   + +GR       +  +   R      ++FDL+Y LP QT+   E  + R
Sbjct: 160 LGVQTFAEHCQQAIGRVQPEELIVQTVDWLREAGVSSINFDLMYGLPGQTLDDLEDSMHR 219

Query: 194 ALSYAVDHLSLY 205
                 D ++L+
Sbjct: 220 TRVLGADRVALF 231


>gi|218681164|ref|ZP_03529061.1| coproporphyrinogen III oxidase [Rhizobium etli CIAT 894]
          Length = 450

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 6/174 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 44  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R 
Sbjct: 104 VHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVSPMIDALAENGVDRA 163

Query: 134 SLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +   +  ++ L        A+A +  A      + FDLIY LPKQT+
Sbjct: 164 SLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAG--VSSIYFDLIYGLPKQTV 215


>gi|312113507|ref|YP_004011103.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218636|gb|ADP70004.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 452

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 9/196 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWM--RQLTGPRSIS 72
              L +Y+H PFC + C YC  N  V  RY    E ++++ + E+     +   G   + 
Sbjct: 45  DTELSLYLHIPFCRRMCWYCGCNMRVIARYSPVTE-YVETLIKEIDLACEKLPKGSMKVR 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I +GGGTP+ +  +++  I + +A  + +  N EI +E +P +   +N     K G  R
Sbjct: 104 HIHWGGGTPTALNGEDMVRIHEAVASRFDILPNAEIAVEIDPRTFTQDNADALGKIGCTR 163

Query: 133 ISLGVQSLE---EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
            SLG+Q  +   ++++  +       + I  +H  +N+   ++FDL+Y LP QT      
Sbjct: 164 ASLGIQEFDITVQEAINRVQPMEVIEDTIRMLH-EQNV-KGLNFDLMYGLPHQTAEMLTR 221

Query: 190 ELQRALSYAVDHLSLY 205
            +++A +   D ++L+
Sbjct: 222 TVEQAATLKPDRIALF 237


>gi|293373130|ref|ZP_06619494.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
 gi|292631901|gb|EFF50515.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
          Length = 454

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 1/187 (0%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           N +  Y+H PFC   C YC  NS+        E ++ +   E+  + R +   R IS I 
Sbjct: 46  NQISFYLHIPFCRHLCHYCGCNSYPAAKPETVEAYVGALHREIDLVARHIDNSRQISQIH 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGG+P+ I    +  + D +       ++ EI IE +P  +  +++Q     G  R S+
Sbjct: 106 YGGGSPTSIPIPMLKELNDHLLSIAPTIASPEIAIECHPGYLSEHDWQQLTACGFTRYSI 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q ++E+ L+ + R  +       + + R     ++FD IY LP Q++  +   +++A 
Sbjct: 166 GIQDMKEEVLKAVNRRPSLLPLQEILQILRASGATVNFDFIYGLPLQSVDSFRKTIEQAS 225

Query: 196 SYAVDHL 202
           +   D L
Sbjct: 226 ALRPDRL 232


>gi|120435769|ref|YP_861455.1| coproporphyrinogen III oxidase [Gramella forsetii KT0803]
 gi|117577919|emb|CAL66388.1| oxygen-independent coproporphyrinogen III oxidase [Gramella
           forsetii KT0803]
          Length = 454

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           S  + +Y+H PFC   C +C  N  + +    +  +++S L E      L     I   +
Sbjct: 49  SEGISIYIHLPFCESLCTFCGCNKRITKNHSVEVPYLESVLKEWGMYCNLFDEIPIIKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+    +N+ L+L GI K    + + E++ E +P++    +   +   G  R+S
Sbjct: 109 HLGGGTPTFFSAENLKLLLSGIFKKSLKAEDAELSFEGHPNNTSFEHLSLFSSFGFTRVS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   EQ  + + R             AR N F  +  D+I+ LP QT       ++R
Sbjct: 169 YGVQDYNEQVQKAIHRVQPFENVKRVTEEARTNGFTSVGHDIIFGLPFQTKEHIIHTIER 228

Query: 194 ALSYAVDHLSLY 205
                 D ++ Y
Sbjct: 229 TKELMPDRIAFY 240


>gi|154174875|ref|YP_001407468.1| coproporphyrinogen III oxidase [Campylobacter curvus 525.92]
 gi|112803271|gb|EAU00615.1| radical SAM domain protein [Campylobacter curvus 525.92]
          Length = 454

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 44/293 (15%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N T +      +Y H PFC   CPYC F+    +Y   QE     F    + MRQ+    
Sbjct: 37  NKTPREGKKYMLYAHVPFCHTFCPYCSFH----KYHYEQELAKIYFENLREEMRQVKDAG 92

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            +  S++ GGGT +LI    +   L    K + +    +I+ E++P+ +   + + +   
Sbjct: 93  FNFGSLYVGGGT-TLINEAELEKTLRLAKKLFDIE---DISAESDPNHISPESLRRF-DG 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            ++R+S+GVQS ++ +L+ +GR     ++ E  A +  A N  P +S DLI+ LP QT  
Sbjct: 148 LIDRLSVGVQSFDDDTLKRVGRFEKFGSSKEVRARLEKALNFLPVISLDLIFNLPNQTKE 207

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---------- 235
           Q   +++ + S A   ++LY L          M  D    L  EN+A  L          
Sbjct: 208 QLVNDIKISKSIAPQQITLYPL----------MKSD----LTRENIARSLGVSNVDNERE 253

Query: 236 -YNLTQSITSAHGLH---AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            Y +     S  G H   A+  SN S   +  + +       +Y+G+G GA S
Sbjct: 254 FYEIIVDEFSRGGYHQSNAWAFSNQS---SVDMRDEYVGSNHEYVGVGSGAFS 303


>gi|332526060|ref|ZP_08402198.1| oxygen-independent coproporphyrinogen III oxidase [Rubrivivax
           benzoatilyticus JA2]
 gi|332109903|gb|EGJ10531.1| oxygen-independent coproporphyrinogen III oxidase [Rubrivivax
           benzoatilyticus JA2]
          Length = 450

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 2/191 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
              + V    PFC   C  CD +    +     ++++   + E++ + QL G R  +   
Sbjct: 52  DEPIAVSARVPFCAAHCFCCDRDIRAAQPDDVIDDYVAGLVEEIREVAQLLGGRREVLQF 111

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGT S +    +A ++  +   W + ++++++ E +P  V    F+  R  G  R+S
Sbjct: 112 HLGGGTASELTGSQLARLVQAMQSEWRMPADIDMSCECDPRRVSQTMFEVLRGLGFRRVS 171

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGV  L+    + +GR  +A+       LAR+     ++ D++  LP+QTM  W   + R
Sbjct: 172 LGVLDLDPGVQQAIGRRQSAALIDDVCELARSAGIEYINLDVMIGLPRQTMASWCTTIDR 231

Query: 194 ALSYAVDHLSL 204
            ++   + + L
Sbjct: 232 LIAMGPERIRL 242


>gi|281424604|ref|ZP_06255517.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           F0302]
 gi|281401275|gb|EFB32106.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           F0302]
          Length = 454

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 2/205 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A E++      N +  Y+H PFC   C YC  NS           + ++   E+  
Sbjct: 32  QYLKAVESSNNATADN-ISFYIHVPFCRHLCHYCGCNSVAMAKPDRITEYFETLHKEIDL 90

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+PS +    I  + + +   +    + EI IE +P  ++  
Sbjct: 91  LLPHLRKDRRISQIHYGGGSPSSMPLPLIRGVNEHLLSAFETIESPEIAIECHPGYLKAE 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++     +G NR SLG+Q      L  + R+ +       + + R    +++FD IY LP
Sbjct: 151 DWHYLLHSGFNRFSLGIQDFNADVLHTVNRHPSLLPVAEIMDILRKGGAKVNFDFIYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
           KQ++ ++   ++ A S   D L  +
Sbjct: 211 KQSVKEFVSTIETAKSLRPDRLVTF 235


>gi|288957090|ref|YP_003447431.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
 gi|288909398|dbj|BAI70887.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
          Length = 487

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 10/200 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLT 66
           T + + S  +Y+H PFC K C YC  ++ +    V +   I  +L  M+        ++ 
Sbjct: 78  TIEPARSGSLYLHVPFCQKMCWYCGCHTKI----VARYAPIAEYLGHMRREIAMVADRIP 133

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G  ++  I FGGGTP+++ P +   ++  +   + ++++ E+ +E +P ++         
Sbjct: 134 GRLAVRHIHFGGGTPTMMAPDDFEAMIALLRGRFDIAADAELAVEIDPRTLTAEMAAALG 193

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +AGVNR SLGVQ  +    + + R    +    A+   R+     ++ DL+Y LP Q++ 
Sbjct: 194 RAGVNRASLGVQDFDGTVQQAINRVQPRAVTEQALAWLRDAGITSVNLDLMYGLPHQSVE 253

Query: 186 QWEMELQRALSYAVDHLSLY 205
                   AL  A D LS++
Sbjct: 254 SVSRSAAIALEMAPDRLSVF 273


>gi|220910134|ref|YP_002485445.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7425]
 gi|219866745|gb|ACL47084.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7425]
          Length = 465

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
             L +Y H PFC   C +C  N+ + + K   + ++      +  + +L  P R +  + 
Sbjct: 55  TPLSLYCHIPFCETACYFCGCNTVITQRKGMVDPYLDYLARNIGQLTELVDPNRRVQQMH 114

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +    +  +   IA+ +  +   EI+IE NP  ++ N   G +  G NRIS 
Sbjct: 115 WGGGTPNYLNLGQVEHLWRTIAQRFKFADQAEISIEVNPRYLDRNYVLGLKAIGFNRISF 174

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q    Q    + R    +     +   R   F  ++ DLIY LP QT+  +   + + 
Sbjct: 175 GIQDFNPQVQTAVNRVQPEALLFNVMDWIREAGFDSVNVDLIYGLPFQTLETFRETIAKT 234

Query: 195 LSYAVDHLSLY 205
           +    D ++++
Sbjct: 235 IDLNPDRIAVF 245


>gi|262370606|ref|ZP_06063931.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           johnsonii SH046]
 gi|262314406|gb|EEY95448.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           johnsonii SH046]
          Length = 454

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 8/195 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
           +  + +Y+H PFC   C +C  +  V +    ++ +IQ+ L E     +W+ +   PR I
Sbjct: 49  TEGISLYIHLPFCESLCTFCGCHKRVTKKHEMEQPYIQAVLKEWSLYCEWLEE--KPR-I 105

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             I  GGGTP+   P ++  +++GI     ++   E + E +P++    + Q     G  
Sbjct: 106 KEIHLGGGTPTFFSPAHLTQLIEGILAQAEIAEQYEFSFEGHPNNTTREHLQALYDLGFR 165

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ   E   + + R             AR I +  +S DL++ LP Q +      
Sbjct: 166 RVSYGVQDYNETVQKAIHRIQPFEHVEQVTQWAREIGYSSISHDLVFGLPFQNLDDVLNT 225

Query: 191 LQRALSYAVDHLSLY 205
           + +      D L+ Y
Sbjct: 226 IDQTNRLRPDRLAFY 240


>gi|313888474|ref|ZP_07822141.1| coproporphyrinogen dehydrogenase HemZ [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845503|gb|EFR32897.1| coproporphyrinogen dehydrogenase HemZ [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 435

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 40/288 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           VYVH PFC  +C YC F++ +     G+ +     LT      +L   +  +SI+ GGGT
Sbjct: 150 VYVHIPFCPSRCLYCSFDTTIEN--KGKMDLYTKNLTYDINSYELEFSKEPNSIYIGGGT 207

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEA---NPSSVEVNNFQGYRKAGVNRISLGV 137
           P+ +  +N+  I+D +   +  +   E T+E    +  S+E+ N    +  GVNRISL  
Sbjct: 208 PTSVGFENLEKIIDALINKFGKTR--EFTVECGRIDSLSLEILNM--LKDKGVNRISLNP 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E+ +  L R  N  +       AR + F  ++ DLI  LP +        +++A+ 
Sbjct: 264 QTFNEEVINKLNRVSNK-DFCFWFDRARELGFETINMDLIMGLPGEDKASILDSIKKAID 322

Query: 197 YAVDHLSLYQLTIEKGT-LF---YKMHKD-GDLVLPSENVAVD-------LYNLTQSITS 244
           ++ ++++L+ L ++ G+ LF   Y   +D G+L+  S+ + ++       LY   +S+ S
Sbjct: 323 FSPENITLHTLALKNGSKLFENSYHNTEDFGNLLEESKRLLMENNYEPYYLYRQKKSVIS 382

Query: 245 AHGL------HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           +  +      HA   S ++ +  E L N+        IG G GA +++
Sbjct: 383 SENIGYAKKGHA---SIYNIVMMEELENI--------IGFGLGASTKI 419


>gi|148926098|ref|ZP_01809784.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845577|gb|EDK22669.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 451

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+     + QN+ L +  +  N+  S + EI+ E +P  +         +   NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDAEISCEIDPRFLNEKQAIVLTQNSFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R  +      A++L R+     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQSFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    ++  S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCENFLSKNG 276


>gi|329937448|ref|ZP_08287006.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
 gi|329303324|gb|EGG47211.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
          Length = 457

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 7/208 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+  G    
Sbjct: 48  AAEDKSALSLYLHIPFCEVRCGFCNLFTRIGAPEGLTGAYLDALERQAGAVREALGEGED 107

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYR 126
              ++  FGGGTP+ +    +  + D IA++   +    + +++EA+P++   +      
Sbjct: 108 IRFATAAFGGGTPTFLTAPELERLCD-IAESRMGARLDAIPLSVEASPATATADRLAVLA 166

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G  R+SLGVQS  E   R   R    ++  AA+   R    P ++ DLIY +  QT  
Sbjct: 167 DRGATRLSLGVQSFVEAEARAAVRPQRRADVEAALARIREARIPVLNIDLIYGIDGQTEE 226

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGT 213
            W   L  AL++A + L LY L +   T
Sbjct: 227 TWLHSLDAALAWAPEELYLYPLYVRPLT 254


>gi|86151059|ref|ZP_01069275.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|205356703|ref|ZP_03223464.1| oxygen independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315124480|ref|YP_004066484.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85842229|gb|EAQ59475.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|205345441|gb|EDZ32083.1| oxygen independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315018202|gb|ADT66295.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
          Length = 451

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTP+       QN+ L +  +  N+  S + EI+ E +P  +         +   NRI
Sbjct: 105 GGGTPTFFSAKQLQNLILKIRSVFGNF--SKDAEISCEIDPRFLNEKQAIVLTQNSFNRI 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R  +      A++L R+     ++ DLIY LP Q +  +   L+
Sbjct: 163 SFGVQDFDEKVQKEIHRIQSFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE 222

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + +    D L+++       ++K      M K  +  LPS +V +++    ++  S +G
Sbjct: 223 KVMLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLEILEFCENFLSKNG 276


>gi|167837260|ref|ZP_02464143.1| coproporphyrinogen III oxidase [Burkholderia thailandensis MSMB43]
          Length = 483

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  +  ++  + + E+ +E +P +V+  
Sbjct: 122 VAPDLGRDRLTTQLHLGGGSPTFFAIDELARLMRALRGHFEFAPHAELGVEIDPRTVDER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALAASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + D +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPDRIAVY 267


>gi|253566873|ref|ZP_04844325.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
 gi|251944436|gb|EES84925.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
          Length = 454

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +YL A +   + Q S  +L  Y+H PFC   C YC  NS    Y + +   I+S++  + 
Sbjct: 32  RYLEAVQQ--SNQASERALSFYLHIPFCRHLCHYCGCNS----YPMARPEIIESYVEALH 85

Query: 61  WMRQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
               L  P     R I+ I +GGG+P+ I    I  +   +  ++ V    EI IE +P 
Sbjct: 86  QEIDLILPLLDKDRPIAQIHYGGGSPTAIPVALIKELNAHLLSSFPVIDRPEIAIECHPG 145

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
            +   ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D 
Sbjct: 146 YLSEKDWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDF 205

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +Y LPKQT+  +   +++A+  + D L ++
Sbjct: 206 LYGLPKQTVENFTRNIEQAILLSPDRLVMF 235


>gi|167647833|ref|YP_001685496.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
 gi|167350263|gb|ABZ72998.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
          Length = 470

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
             ++ +Y+H PFC + C YC  N+    R   VG  ++++  L E+  +      R +  
Sbjct: 65  DQAVSLYLHIPFCARLCWYCGCNTRAVNRHEPVG--DYVRLLLDEIDLLGAALPARLTAG 122

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++ FGGGTP+++    +  I D + K + ++S+++I IE +P+ +  +  +     G++R
Sbjct: 123 TVHFGGGTPNMLSTDEVDAIFDRLGKVFDLASDIDIAIEMDPAVLTRDWVRAAGARGLSR 182

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQ+L  +    + R     +    +   R      ++ DL+Y LP QT       L
Sbjct: 183 ASLGVQNLTPEVQAAVNRRDTFDQIADCVAWLREAKVASINLDLMYGLPHQTTANTLSTL 242

Query: 192 QRALSYAVDHLSLY 205
              L+   + L+L+
Sbjct: 243 DELLTLRPERLALF 256


>gi|222824130|ref|YP_002575704.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           lari RM2100]
 gi|222539352|gb|ACM64453.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           lari RM2100]
          Length = 451

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 30/283 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y H PFC   C +C  N      +  +E ++     E++ +  +    R ++ + FG
Sbjct: 46  LSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLSYLFKELELLANIINTQREVAQMHFG 105

Query: 78  GGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGTP+     + Q + L +  I  N+T  S  EI+ E +P  +           G NRIS
Sbjct: 106 GGTPTFFSAKQLQKLILKIKNIFPNFTQDS--EISCEIDPRFLNEEQADVLISNGFNRIS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  +E+  + + R         A+ + R      ++ DLIY LP Q++  ++  L++
Sbjct: 164 FGVQDFDEKVQKEIHRIQPFELTKNAVDMVRKKGIKSVNMDLIYGLPYQSLESFKQTLEK 223

Query: 194 ALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL- 248
           AL    D  +++       ++K      M K  +  LPS +V + +    +   + +G  
Sbjct: 224 ALLINPDRFAIFNYAHVPWLKKN-----MRKFDESTLPSPDVKLQILEYCEIFLTQNGYK 278

Query: 249 -----HAYEISNHSFLGAE--SLHNLNYWRY-----GDYIGIG 279
                H  +  +  F   E  SLH  N+  Y      D IGIG
Sbjct: 279 MIGMDHFAKPQDELFKALENGSLHR-NFQGYTTKGGTDLIGIG 320


>gi|261885446|ref|ZP_06009485.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 379

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 16/244 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G  +  L +Y H PFC   C +C  N            ++     E++ + + L   R +
Sbjct: 42  GDKNRKLSLYFHLPFCRSACYFCGCNVIYTSKSDKMSRYLDYLSKELEILSEVLDTKRQV 101

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + + FGGGTP+      +  ++  I    KNW  S + EI+ E +P  +  +        
Sbjct: 102 TQMHFGGGTPTFYSADELDRLIKEIKKHFKNW--SDDAEISCEIDPRFLNEDQLDVLVGH 159

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S GVQ  +E+    + R         A+ +AR+     ++ DLIY LP Q++  +
Sbjct: 160 GFNRVSFGVQDFDEKVQTEIHRIQPFEMTKNAVDMARSKGITSINTDLIYGLPYQSLESF 219

Query: 188 EMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  L+  +S   D  +++       I+K      M K  +  LP+  + +++   T    
Sbjct: 220 KKTLELGVSLNPDRFAVFNYAHVPWIKKS-----MRKFDEATLPNPKIKLEILKYTMEFL 274

Query: 244 SAHG 247
           +++G
Sbjct: 275 TSNG 278


>gi|294341934|emb|CAZ90363.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Thiomonas
           sp. 3As]
          Length = 467

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
              + +Y H PFC   C YC  N    +       ++ S   E++ +  +   R  ++ +
Sbjct: 53  DEPVSLYFHVPFCETLCYYCGCNKIPTKNHGRSTPYLDSVEQELRLIASILQARLPVTQL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +  +  A ++    +++ +    E +IE +P  V         + G NR+S
Sbjct: 113 HWGGGTPTFLNDEEAARLMAMTREHFDLQPGGEFSIEIDPRKVNEARVAHLAQLGFNRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ    +  + + R  +  E    I  AR N F  +S DLIY LP Q +  +   L +
Sbjct: 173 VGVQDFAPEVQQAVNRIQSVEETRLVIDAARANGFSSISLDLIYGLPFQNLDSFARTLDQ 232

Query: 194 ALSYAVDHLSLY 205
            +  + D LSLY
Sbjct: 233 VIEISPDRLSLY 244


>gi|317177482|dbj|BAJ55271.1| coproporphyrinogen III oxidase [Helicobacter pylori F16]
          Length = 457

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S N+E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQNIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|117617608|ref|YP_856513.1| coproporphyrinogen III oxidase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559015|gb|ABK35963.1| radical SAM domain protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 459

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           +Y+H PFC K+C +C+F       + + RY     N +   L +       T  R  +++
Sbjct: 63  LYIHIPFCRKRCSFCNFFENGANPARITRYV----NALCRALAQAA-ETPFTQSRPFTAV 117

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +    +A++   I + + ++S+ E+T+E   +  +   +      G NR S
Sbjct: 118 YVGGGTPTDMSADELAMLAAAI-RRFPLTSDAEVTLEGRLNGFDDAKWHSALAGGFNRFS 176

Query: 135 LGVQSLE----EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            GVQS +    +++ RF  R    +  I    L R+    +  DLI+ LP Q    W  +
Sbjct: 177 FGVQSFDTEVRQEAARFDDRE---TLLIRLGELTRHDDAVIVADLIFGLPGQDDAVWRQD 233

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +   ++  V  + LYQL    GT   +    G L
Sbjct: 234 IADVMASGVHGVDLYQLIAMAGTNLARAEAKGKL 267


>gi|170739276|ref|YP_001767931.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
 gi|168193550|gb|ACA15497.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
          Length = 490

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 2/169 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             + +Y+H PFC + C YC  ++ V   +   E+++ +   E+  + +    R +  ++ 
Sbjct: 76  EPVSLYLHVPFCDQLCWYCGCHTSVVHRRGPIEDYVATLTREIGLVAEALPARLAAGAVH 135

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+L+ P ++A +++ + +++T+S +     E +P  +           G+NR SL
Sbjct: 136 FGGGTPNLLAPGDLAAVVEALRRHFTLSPDTAFAAELDPRLLTEAWITTACGLGLNRASL 195

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQT 183
           GVQ L+ Q    + R    S    ++ HL R     ++ DL+Y LP QT
Sbjct: 196 GVQDLDPQVQAAINRRQPFSMVAWSVEHLRRAGVGSINLDLMYGLPHQT 244


>gi|154174680|ref|YP_001408658.1| coproporphyrinogen III oxidase [Campylobacter curvus 525.92]
 gi|112803898|gb|EAU01242.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           curvus 525.92]
          Length = 453

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 26/284 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
           S  L +Y+H PFC   C +C  N         +E +I     E++ +   L     +  +
Sbjct: 45  SRPLSLYLHLPFCRSACYFCGCNVIYTSKDDRKERYIGYLEKELEILSTHLDTSVPVLQM 104

Query: 75  FFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            FGGGTP+  +   +  I+  I AK      N E++ E +P  +           G NR+
Sbjct: 105 HFGGGTPTFYDATQLDRIIRLIKAKFQNFLPNAEVSCEIDPRFLNEAQLDVLVSHGFNRV 164

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  +E+  + + R         A++LAR      ++ DLIY LP Q++  ++  L+
Sbjct: 165 SYGVQDFDEKVQKEIHRIQPYEITQNAVNLARKKGINSVNMDLIYGLPYQSLDSFKHTLE 224

Query: 193 RALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            AL+   D L+++       I+K      M K  +  LPS  V +++   T    + +G 
Sbjct: 225 LALTLDPDRLAIFNYAHVPWIKKS-----MRKFDETTLPSPQVKLEILKYTAEFLTKNGY 279

Query: 249 ------HAYEISNHSF--LGAESLHNLNYWRY-----GDYIGIG 279
                 H  + ++  F  L   +LH  N+  Y      D IGIG
Sbjct: 280 KMIGMDHFAKPNDELFAALANGTLHR-NFQGYTTKGGADLIGIG 322


>gi|60681472|ref|YP_211616.1| coproporphyrinogen III oxidase [Bacteroides fragilis NCTC 9343]
 gi|60492906|emb|CAH07682.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
          Length = 454

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +YL A +   + Q S  +L  Y+H PFC   C YC  NS    Y + +   I+S++  + 
Sbjct: 32  RYLEAVQQ--SNQASERALSFYLHIPFCRHLCHYCGCNS----YPMARPEIIESYVEALH 85

Query: 61  WMRQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
               L  P     RSI+ I +GGG+P+ I    I  +   +  ++      EI IE +P 
Sbjct: 86  QEIDLILPLLDKDRSIAQIHYGGGSPTAIPVALIKELNAHLLSSFPAIDRPEIAIECHPG 145

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
            +   ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D 
Sbjct: 146 YLSEKDWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDF 205

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +Y LPKQT+  +   +++A+  + D L ++
Sbjct: 206 LYGLPKQTVENFTRNIEQAILLSPDRLVMF 235


>gi|149916431|ref|ZP_01904950.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
 gi|149809701|gb|EDM69555.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
          Length = 442

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 5/195 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           QG+  + +YVH PFC + C +C   +   +       ++++   E+Q + + L     +S
Sbjct: 38  QGAK-ISLYVHVPFCRRLCWFCACRTQGTQTDKPVIAYLETLKAELQMLGKHLPRGVQLS 96

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+L++P  +  + + I K    +   E ++E +P+ ++         AG+NR
Sbjct: 97  RLHWGGGTPTLLQPSMMQDLAEAIKKIAPFTDETEFSVEIDPNEIDGPRLDALAAAGMNR 156

Query: 133 ISLGVQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            S+GVQ   +     +GR   ++ ++  A    AR +   ++ D++Y LP Q+  +    
Sbjct: 157 ASIGVQDFNDDIQHSIGRLQGYDITKWAADEIRARGV-ASLNADILYGLPHQSKARITES 215

Query: 191 LQRALSYAVDHLSLY 205
           +Q+ LS   D ++LY
Sbjct: 216 VQKLLSLNPDRVALY 230


>gi|298290109|ref|YP_003692048.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
 gi|296926620|gb|ADH87429.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
          Length = 439

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 2/170 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G+N L +Y+H PFC   C YC   +   R       ++     E++++    G R+++ I
Sbjct: 44  GAN-LSLYLHVPFCPALCFYCGCTTKATRRPEPVAAYVARLEREIEFVAAHAGGRTVTHI 102

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTPSL+  + +  + D I++ + +    E   E +P  V+          GV+R+S
Sbjct: 103 AWGGGTPSLVGGKALRRLYDRISEAFDLDRLTEHAFELDPREVDEEIADALAAIGVDRVS 162

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           LGVQ       R +GR         A+ L R      ++ DL+Y LP Q+
Sbjct: 163 LGVQDFSAHVQRAIGRVQPFGTVERAVRLLREAGVSSVNLDLMYGLPHQS 212


>gi|241761676|ref|ZP_04759763.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241373984|gb|EER63517.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 453

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + VY+H PFC + C YC  ++ V R +     ++ + + E++ +  L      I  + +G
Sbjct: 56  ISVYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDTLVKEIETVGNLAPNHLKIGHLSWG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+I  + I  ++  + + +  + ++   +E +P  ++    Q     G+NR SLGV
Sbjct: 116 GGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELDPRLLDAEFAQNLFDIGINRTSLGV 175

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q       + +GR     +   AI   R     +++FDL+Y LP Q + +  +  Q  L 
Sbjct: 176 QDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVNFDLLYGLPHQGLDEIRLNCQETLR 235

Query: 197 YAVDHLSLY 205
            + D ++ +
Sbjct: 236 LSPDRIACF 244


>gi|323344452|ref|ZP_08084677.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           oralis ATCC 33269]
 gi|323094579|gb|EFZ37155.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           oralis ATCC 33269]
          Length = 454

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRSISSIFF 76
           Y+H PFC   C YC  NS    Y +G++  ++ ++  +          +   RSIS I +
Sbjct: 51  YLHIPFCSDLCHYCGCNS----YSMGKDGMLERYVAALHKEIDIIAAHIRPDRSISQIHY 106

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+P+ +    I  + D +     V    EI IE +P  +   ++Q   + G  R SLG
Sbjct: 107 GGGSPTALPIHYIHELNDHMLSLLPVIDRPEIAIECHPGYLTAYDWQKLIECGFTRYSLG 166

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW--------E 188
           +Q  +E+ L+ + R  +       +HL R+    ++ D ++ LP QT   +        E
Sbjct: 167 IQDFDERVLKAVNRRPSLLPIEEILHLLRSSGATVNLDFLFGLPYQTPLSFQHAIEMGAE 226

Query: 189 MELQRALSYAVDHLSLY---QLTIEK 211
           ++ +R ++++  H+      QL +EK
Sbjct: 227 LQPERLVTFSYGHVPWVHKRQLILEK 252


>gi|34763193|ref|ZP_00144158.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887131|gb|EAA24237.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 232

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFF 76
           LG+Y H P+C K C +C+ N   ++     E + +    E++     +      I  +FF
Sbjct: 43  LGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYEFCKTSEIDVVFF 100

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + GVNRIS+G
Sbjct: 101 GGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENGVNRISVG 160

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQT 183
           +Q+   +  + L R ++ +  +  +   +  F  +   D+IY    QT
Sbjct: 161 IQTFSNRGRKLLNRTYDKNYVVERLKEIKKRFSGLVCIDIIYNYANQT 208


>gi|221639745|ref|YP_002526007.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides KD131]
 gi|221160526|gb|ACM01506.1| Coproporphyrinogen III oxidase, anaerobic 1 [Rhodobacter
           sphaeroides KD131]
          Length = 452

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + VYVH PFC + C +C   +   +     E ++ + L E++ ++Q L        + +G
Sbjct: 51  ISVYVHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKQHLPAGVKAGRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G+
Sbjct: 111 GGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIGI 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     +GR        A +  L R     ++ DL+Y LP Q        + + LS
Sbjct: 171 QDFTDIVQNAIGREQPFENTKACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVLS 230

Query: 197 YAVDHLSLY 205
            A D ++++
Sbjct: 231 LAPDRVAIF 239


>gi|159043212|ref|YP_001532006.1| coproporphyrinogen III oxidase [Dinoroseobacter shibae DFL 12]
 gi|157910972|gb|ABV92405.1| oxygen-independent coproporphyrinogen III oxidase [Dinoroseobacter
           shibae DFL 12]
          Length = 453

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 21/315 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIF 75
           + + +Y H PFC + C +C   +   +       ++ + L E+  +R  L     +S I 
Sbjct: 49  SEISLYAHVPFCRRLCWFCACRTQGTQSDAPVRAYVDTLLAEIALLRAALPEGVRLSRIH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+L+ P  +  + + +      +   E ++E +P+ ++         AG+NR S+
Sbjct: 109 WGGGTPTLLAPDLVTRLAEAMFALAPTTDRAEFSVEIDPNEIDAARLDALAAAGMNRASI 168

Query: 136 GVQSLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           GVQ  +    + +GR      +EA+      R I   ++ D++Y LP QT  +    +Q+
Sbjct: 169 GVQDFDPDIQKAIGREQRFEVTEAVVMDLRDRGIR-SLNTDILYGLPFQTPVKITESVQK 227

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-----TSAHGL 248
            LS   D ++LY        +  + +   +  LP+    +DL+   + +      +  G+
Sbjct: 228 LLSLQPDRVALYGYA-HVPWMARRQNLIPNEALPTPEARLDLFETARRLFRWDNYAEIGI 286

Query: 249 H--AYEISNHSFLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
              A++    +   AE   + N+  Y D      IG+G  A SR   G  + A    +  
Sbjct: 287 DHFAHQGDGLAVAAAERRLHRNFQGYTDDSATVLIGLGASAISRFPQGYAQNASGTAQ-- 344

Query: 302 ESWLKMVRKNGHAVV 316
             + K +R  G A V
Sbjct: 345 --YQKAIRAGGFATV 357


>gi|260754040|ref|YP_003226933.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258553403|gb|ACV76349.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 453

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + VY+H PFC + C YC  ++ V R +     ++ + + E++ +  L      I  + +G
Sbjct: 56  ISVYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDTLVKEIETVGNLAPNHLKIGHLSWG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+I  + I  ++  + + +  + ++   +E +P  ++    Q     G+NR SLGV
Sbjct: 116 GGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELDPRLLDAEFAQNLFDIGINRTSLGV 175

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q       + +GR     +   AI   R     +++FDL+Y LP Q + +  +  Q  L 
Sbjct: 176 QDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVNFDLLYGLPHQGLDEIRLNCQETLR 235

Query: 197 YAVDHLSLY 205
            + D ++ +
Sbjct: 236 LSPDRIACF 244


>gi|118474291|ref|YP_892704.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413517|gb|ABK81937.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 453

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 30/289 (10%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G  +  L +Y H PFC   C +C  N            ++     E++ + + L   R +
Sbjct: 42  GDKNRKLSLYFHLPFCRSACYFCGCNVIYTSKSDKMSRYLDYLSKELEILSEVLDTKRQV 101

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           + + FGGGTP+      +  ++  I    KNW    + EI+ E +P  +  +        
Sbjct: 102 TQMHFGGGTPTFYSADELDRLIKEIKKHFKNWI--DDAEISCEIDPRFLNEDQLDVLVGH 159

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S GVQ  +E+    + R         A+ +AR+     ++ DLIY LP Q++  +
Sbjct: 160 GFNRVSFGVQDFDEKVQTEIHRIQPFEMTKNAVDMARSKGITSINTDLIYGLPYQSLESF 219

Query: 188 EMELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  L+  +S   D  +++       I+K      M K  +  LP+  + +++   T    
Sbjct: 220 KKTLELGVSLNPDRFAVFNYAHVPWIKKS-----MRKFDEATLPNPKIKLEILKYTMEFL 274

Query: 244 SAHGL------HAYEISNHSFLGAE--SLHNLNYWRY-----GDYIGIG 279
           +++G       H  +  +  F   E  SLH  N+  Y      D IGIG
Sbjct: 275 TSNGYKMIGMDHYAKEDDELFKALENGSLHR-NFQGYTTKGGADLIGIG 322


>gi|56552260|ref|YP_163099.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543834|gb|AAV89988.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 453

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC + C YC  ++ V R +     ++ + + E++ +  L      I  + +G
Sbjct: 56  ISIYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDTLVKEIETVGNLAPNHLKIGHLSWG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+I  + I  ++  + + +  + ++   +E +P  ++    Q     G+NR SLGV
Sbjct: 116 GGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELDPRLLDAEFAQNLFDIGINRTSLGV 175

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q       + +GR     +   AI   R     +++FDL+Y LP Q + +  +  Q  L 
Sbjct: 176 QDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVNFDLLYGLPHQGLDEIRLNCQETLR 235

Query: 197 YAVDHLSLY 205
            + D ++ +
Sbjct: 236 LSPDRIACF 244


>gi|301348095|ref|ZP_07228836.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB056]
          Length = 380

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 7/202 (3%)

Query: 50  NFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSN 105
           +F   FL+ E    ++      + S++ GGGTP+L++P +   +  ++  +  +  +SS 
Sbjct: 6   DFYLDFLSREAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSP 65

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +E+T+E  P     +  +  + AG NR+S+GVQ + ++ +   GR     +   AI L  
Sbjct: 66  IEMTLEGIPQLFNEDKIRAIKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFH 125

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                 + DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K     
Sbjct: 126 KYSLSCNVDLIYGWPNQTVEAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQN--- 182

Query: 226 LPSENVAVDLYNLTQSITSAHG 247
            PS    +++YN+ +    + G
Sbjct: 183 TPSIEKKIEMYNIAKQFLISKG 204


>gi|110834203|ref|YP_693062.1| coproporphyrinogen III oxidase [Alcanivorax borkumensis SK2]
 gi|110647314|emb|CAL16790.1| coproporphyrinogen oxidase [Alcanivorax borkumensis SK2]
          Length = 457

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           L +Y+H PFC   C YC  N  +   K    ++++    E+Q     +   R ++ + +G
Sbjct: 51  LSLYIHIPFCGSVCYYCACNRIITANKARSADYLRLLKQEIQRKAVHVDSRRPVTQMHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ ++   +  ++  +A+++ +  +   +  IE +P +V+ +     R  G NR+SL
Sbjct: 111 GGTPTFLDDGQLTELVYDLARHFNLRDDERSDYAIEIDPRTVDQSRLGLLRGLGFNRVSL 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+ +  + + R          +  +R+  F  ++ DLIY LP Q+ +     L++ 
Sbjct: 171 GVQDLDPRVQKAVNRVQPYELIRDTMEWSRDFGFRSINTDLIYGLPWQSESSLARTLEQL 230

Query: 195 LSYAVDHLSLY 205
           L+   D +SLY
Sbjct: 231 LTLRPDRISLY 241


>gi|260574218|ref|ZP_05842223.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
 gi|259023684|gb|EEW26975.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
          Length = 451

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 4/192 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
           +S+ +Y+H PFC + C +C   +           + +    E+  ++    P   +S + 
Sbjct: 49  SSVSLYLHVPFCRRLCWFCACRTQGTSSDEPVRAYARVLKAEIALLKARLAPGVHLSRLH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+L++P  I  +   I     +    E ++E +P+ V+        ++G+NR S+
Sbjct: 109 WGGGTPTLLQPDMIRDLAATIFDAVPMGPGAEFSVEIDPNEVDDARLDALAQSGMNRASI 168

Query: 136 GVQSLEEQSLRFLGRNHN--ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           GVQ  +    + +GR  +   ++ +A    AR +   ++ D++Y LP QT  +    +Q+
Sbjct: 169 GVQDFDPMIQKVIGREQSFELTKQVADAIRARGV-KSLNADILYGLPHQTQARITDSVQK 227

Query: 194 ALSYAVDHLSLY 205
            L+ + D ++LY
Sbjct: 228 LLALSPDRVALY 239


>gi|197106267|ref|YP_002131644.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
 gi|196479687|gb|ACG79215.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
          Length = 458

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 4/171 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS 73
           ++ + +Y+H PFC + C YC  N+  V R++  +E ++Q  L EM  ++Q L      ++
Sbjct: 53  ADPVSLYLHIPFCARLCWYCGCNTRAVNRHEPVRE-YVQLLLAEMGLLQQALPAKLKATA 111

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I FGGGTP+++    +A I   +   + ++ + E+  E +P+ +  +  +     G+NR 
Sbjct: 112 IHFGGGTPNMLSVDELAAIFGALDNVFALAPDREVAAELDPAVLTRDWVRAAAFHGLNRA 171

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQT 183
           SLGVQ+L+ +    + R  +  +    +   R    R ++ DL+Y LP QT
Sbjct: 172 SLGVQNLDPKVQAAVNRKESFEDIARCVGWLREAGIRSLNLDLMYGLPHQT 222


>gi|255322053|ref|ZP_05363201.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           showae RM3277]
 gi|255300866|gb|EET80135.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           showae RM3277]
          Length = 453

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 26/286 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             S  L +Y+H PFC   C +C  N      +  +  ++Q    E+  +   L     + 
Sbjct: 43  DASRPLSLYLHLPFCRSACYFCGCNVIYTSKEDRKTRYMQYLQKELDLLAANLDTSAPVL 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+      +  I+  I AK    S   EI+ E +P  +           G N
Sbjct: 103 QMHFGGGTPTFYGADQLDEIIKMIKAKFKNFSPEAEISCEIDPRFLTPEQLDVLISHGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ  +E+  + + R         A+ +AR      ++ DLIY LP QT+  ++  
Sbjct: 163 RVSYGVQDFDERVQKEIHRIQPYEITKNAVDMARAKGINSINMDLIYGLPYQTLESFKAT 222

Query: 191 LQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           L +AL+ + D L+++       I+K      M K  +  LPS    +++   T      +
Sbjct: 223 LDKALTLSPDRLAVFNYAHVPWIKKS-----MRKFDEATLPSPKTKLEILKYTAEFFIKN 277

Query: 247 GLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIG 279
           G     + + +  G E        +LH  N+  Y      D IGIG
Sbjct: 278 GYKMIGMDHFAKPGDELFAALANGTLHR-NFQGYTTKGGADLIGIG 322


>gi|332877771|ref|ZP_08445512.1| coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684351|gb|EGJ57207.1| coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 454

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 145/339 (42%), Gaps = 29/339 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +++Y  +   +G   + +Y+H PFC   C +C  +  + +    +  +I + L E Q   
Sbjct: 40  VTSYNESNANEG---ISLYIHLPFCESLCTFCGCHKRITKRHEVEAPYIDAVLKEWQLYT 96

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            +   R  I  I  GGGTP+  +P  +  +++GI +   ++   E + E +P++    + 
Sbjct: 97  DVLVARPLIKEIHLGGGTPTFFKPSELKRLIEGIFERADIAEQHEFSFEGHPNNTSKAHL 156

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G  R+S GVQ   E+  + + R             AR I +  +S DL++ LP 
Sbjct: 157 QLLYDLGFRRVSYGVQDYSEKVQKAIHRLQPFENVKRVTDQAREIGYTSVSHDLVFGLPF 216

Query: 182 QTMTQWEMELQRALSYAVDHLSLY---QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN- 237
           QT+      + ++ +   D ++ Y    +   KG    +  KD D  +PS  V   LY  
Sbjct: 217 QTLDDVLYTIDKSNTLRPDRIAFYSYAHVPWIKGN-GQRGFKDED--VPSGEVKRQLYEE 273

Query: 238 ----LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
               L Q   +  G+  + +   S   A   H L    + +++G    + ++V +G    
Sbjct: 274 GKERLLQVGYAEIGMDHFALPTDSMYRAFEQHQL----HRNFMGYT-ASKTQVMIGLGMS 328

Query: 294 AISI--------EKHPESWLKMVRKNGHAVVEKEFLSSE 324
           AIS         EK  E++ + + KN   V +   L+ E
Sbjct: 329 AISDSWYGFAQNEKDLEAYYERLEKNEIPVCKGHILNPE 367


>gi|89056350|ref|YP_511801.1| coproporphyrinogen III oxidase [Jannaschia sp. CCS1]
 gi|88865899|gb|ABD56776.1| oxygen-independent coproporphyrinogen III oxidase [Jannaschia sp.
           CCS1]
          Length = 442

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 94/191 (49%), Gaps = 4/191 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
           + + +Y+H PFC + C +C   +          +++ + + E + +     P     S++
Sbjct: 49  SEVSLYIHIPFCQRLCWFCSARTQGAPGGAPVASYVDTLIREARAVGAALPPGVRARSVY 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+++ P +I  +   +     ++++ EIT+E +P+ ++        + G+ R S+
Sbjct: 109 WGGGTPTILSPADITRLSCAVHSAIPLTNDAEITVEVDPTEIDDARMDALAQMGMTRASI 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           GVQ  + +  + +GR  +     AAI    AR +   ++  L+Y LPKQ  T      Q 
Sbjct: 169 GVQDFDPEIQKIIGRAQSFEATKAAIDGLRARGV-DGLTMGLLYGLPKQRRTSLARLTQL 227

Query: 194 ALSYAVDHLSL 204
            L+ + D +++
Sbjct: 228 LLTLSPDRVTV 238


>gi|237753152|ref|ZP_04583632.1| coproporphyrinogen III oxidase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375419|gb|EEO25510.1| coproporphyrinogen III oxidase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 427

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 17/193 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC   C YC FN    R+   +E    + ++   EMQ ++ L      S ++ G
Sbjct: 48  LYMHIPFCATLCTYCSFN----RFLFQEEKAKLYFENLRKEMQMVKDLG--YDFSEVYVG 101

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT S++ P  +   LD     + +    E++ E++P+ ++    + + K  V+R+S+GV
Sbjct: 102 GGTTSIM-PDELCKTLDLAKSLFNIK---EVSCESDPNHLQKETLESF-KGRVDRLSVGV 156

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++  LR +GR     +  E    +  A  I P ++ DLI+  P QT      +L+  
Sbjct: 157 QSFDDGILRKIGRYEKFGSGEETYKKLEQAIGILPILNVDLIFNFPNQTQEMLVRDLELI 216

Query: 195 LSYAVDHLSLYQL 207
                + L+ Y L
Sbjct: 217 KQLKPNQLTTYPL 229


>gi|78484846|ref|YP_390771.1| coproporphyrinogen III oxidase [Thiomicrospira crunogena XCL-2]
 gi|78363132|gb|ABB41097.1| coproporphyrinogen III oxidase, anaerobic [Thiomicrospira crunogena
           XCL-2]
          Length = 460

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 7/222 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFF 76
           +L +Y H PFC   C +C  N    R +     ++     E++   +L    R +  + +
Sbjct: 53  NLSLYFHIPFCDTVCFFCACNKVWTRDRSKTTPYLARLYQEVEMQAKLFDSNRKVDQLHW 112

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ I    +  ++    K++ +  +   E +IE +P      + +  R+ G NR+S
Sbjct: 113 GGGTPTFINMDEMRELMAVTRKHFNLHDDDSGEYSIEIDPREANKESVKLLRELGFNRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +    + + R    ++    +  AR   F  ++ DLIY LP QT + +   L +
Sbjct: 173 LGVQDFDPNVQKAVNRIQTEAQTFEVLEGAREAGFMSVNVDLIYGLPHQTESGFMATLDK 232

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK--DGDLVLPSENVAV 233
            L  A D  S++       ++F    K  + D+  P E +A+
Sbjct: 233 VLEVAPDRFSIFNYA-HMPSMFPTQKKMNEADMPSPDEKLAI 273


>gi|257790289|ref|YP_003180895.1| HemN domain-containing protein [Eggerthella lenta DSM 2243]
 gi|257474186|gb|ACV54506.1| HemN domain protein [Eggerthella lenta DSM 2243]
          Length = 410

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 20/284 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N L V + +P+C ++C YCD  S V   +V   E +  + + E++        R + S+ 
Sbjct: 2   NELHVDLSFPYCPRRCDYCD--SLVATGRVADFERYADALVRELRAAAPEARGRIVMSVR 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GG+P L+ P+ +A ++D +   + V+ + +  ++A  + +  +    YRKAG+  + L
Sbjct: 60  FSGGSPVLMPPKALARVMDELRNAFEVAPDADAALQATCAGLSFDALGHYRKAGITFLEL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD-----LIYALPKQTMTQWEME 190
           G ++ +      LG  +  +  I     AR +    S+D     L+Y LP Q        
Sbjct: 120 GQETFDGVQHDALGLCYPMNSYID----ARQLLTFCSWDGLGMSLLYGLPGQNRVNLSTS 175

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  A+ +    ++L  L +  G+     Y  H +    LP +    D   L         
Sbjct: 176 IVNAVGFGAREIALAPLRLRPGSALHERYAEHPERFDALPRKAWPTDDERLALRAAGEEQ 235

Query: 248 LHA---YEISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRV 286
           L A     ++ H F    +L      R  D   +G+G GA S++
Sbjct: 236 LVAGGFTRVTQHLFSADGTLRASQRARCDDVDRLGVGAGAWSKL 279


>gi|282880050|ref|ZP_06288772.1| coproporphyrinogen dehydrogenase [Prevotella timonensis CRIS 5C-B1]
 gi|281306164|gb|EFA98202.1| coproporphyrinogen dehydrogenase [Prevotella timonensis CRIS 5C-B1]
          Length = 456

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 2/203 (0%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YLSA E +        +  Y+H PFC   C YC  NS+    +  ++ ++ +   E+  
Sbjct: 32  QYLSAIEASNHHAHQPLVSFYLHIPFCRHLCHYCGCNSYPMANQDMRKRYVDALHQEIDL 91

Query: 62  MRQL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +     T  R IS I +GGG+P+ +   ++  + + +       ++ EI IE +P  +  
Sbjct: 92  IASHLDTQNRQISQIHYGGGSPTALPIADLKSLNEHLRSLMPTIAHPEIAIECHPGYLAE 151

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            +++   + G NR SLG+Q  +E  L+ + R  +       +HL R     ++ DL++ L
Sbjct: 152 GDWEALAQCGFNRYSLGIQDFDEHVLKAVNRRPSLLPVEEIMHLLRQQGATVNMDLLFGL 211

Query: 180 PKQTMTQWEMELQRALSYAVDHL 202
           P QT   +    ++A +   D +
Sbjct: 212 PYQTPDSFARAAEQAANLHPDRI 234


>gi|218677391|ref|ZP_03525288.1| coproporphyrinogen III oxidase [Rhizobium etli CIAT 894]
          Length = 235

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 2/171 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
           +  + VY+H PFC   C YC  ++ + R       ++     E++ +    G    + ++
Sbjct: 37  TGPVSVYLHVPFCRSMCWYCGCHTTITRQDAPVVEYLDVMSQEIELVSFAAGNDVPVKNV 96

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP++++PQ    ++  +   +    +  + +E +P ++  +  +   + GV+R S
Sbjct: 97  HFGGGTPTIMKPQEFTALMAKLRSAFAFEVDASVAVEIDPRTLAASMIEVLGENGVDRAS 156

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           LGVQS +      + R  +  +  AA+   R+     ++FDLIY LPKQT+
Sbjct: 157 LGVQSFDPIVQAAINRMQSFEQTEAAVAGLRSAGVTSINFDLIYGLPKQTV 207


>gi|238919809|ref|YP_002933324.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238869378|gb|ACR69089.1| coproporphyrinogen III oxidase-like protein, putative [Edwardsiella
           ictaluri 93-146]
          Length = 460

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 21  VYVHWPFCVKKCPYCDF------NSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           VYVH PFC   C +C F         + RY   + +E  ++S L   Q     + P  I 
Sbjct: 56  VYVHIPFCATHCTFCGFYQNRFSEQAIARYFDYLQREIDLESALPLQQ-----SAP--IH 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTPS +  + +  ++  +     ++++ EIT+E    + +         AG NR
Sbjct: 109 AIYLGGGTPSALNAEQLHRLIVQLRSLLPLAADCEITVEGRVLNFDDARIDACLAAGANR 168

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            S+G+Q+ +    + +GR  +   AIA +  LA      +  DL++ LP QT  +W+ +L
Sbjct: 169 FSIGIQTFDTHLRQRMGRRADRDRAIAFLRALAERDRAAVICDLMFGLPGQTAREWQNDL 228

Query: 192 QRALSYAVDHLSLYQLTIEKGT 213
                  +D + LY L +   T
Sbjct: 229 DIVHDLPLDGVDLYALNLLPST 250


>gi|237813114|ref|YP_002897565.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
 gi|237504218|gb|ACQ96536.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|315223926|ref|ZP_07865771.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea F0287]
 gi|314946098|gb|EFS98102.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea F0287]
          Length = 479

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 3/207 (1%)

Query: 2   KYLSAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   + T   S   + +Y+H PFC   C +C  +  + +    +  +I++ L E Q
Sbjct: 59  KWLESLRKSYTESNSTEGISLYIHLPFCESLCTFCGCHKRITKRHEMEAPYIEAILKEWQ 118

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                   R  I  I  GGGTP+  EP  +  +++GI +    +   E + E +P++   
Sbjct: 119 LYTNFLKERPRIKEIHLGGGTPTFFEPLQLRRLIEGIFERADKADAHEFSFEGHPNNTTE 178

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
            + Q     G  R+S GVQ    +  + + R             AR I +  +S DL++ 
Sbjct: 179 THLQTLYDLGFRRVSYGVQDYSPKVQKAIHRIQPFESVQRVTKQARAIGYTSVSHDLVFG 238

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP QT+      + R+ +   D ++ Y
Sbjct: 239 LPFQTLDDVLFTIDRSNTLRPDRIAFY 265


>gi|134277306|ref|ZP_01764021.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
 gi|134250956|gb|EBA51035.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAEHNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|145588903|ref|YP_001155500.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047309|gb|ABP33936.1| coproporphyrinogen III oxidase, anaerobic [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 471

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---ISSIF 75
           L +Y H PFC   C YC  N  + +       +I+    EM  +    G +    I+ + 
Sbjct: 64  LSLYFHLPFCPNICYYCGCNKIITKDHGRSAKYIKYLAKEMAMVSAAMGAQKKIPITQLH 123

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +  + +  ++     ++ +    E +IE +P  V   +       G NRISL
Sbjct: 124 WGGGTPTFLSHEEMVELMHHTRTHFELLPGGEYSIEIDPRRVTEQDIALLADLGFNRISL 183

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ         + R     E  A +  +R   F   S DLIY LPKQT   ++  +   
Sbjct: 184 GVQDFNLAVQEAVHRVQTIEETQAVMDWSRKYGFKSRSVDLIYGLPKQTPETFKETVDAV 243

Query: 195 LSYAVDHLSLY 205
           L    D LS+Y
Sbjct: 244 LKMNPDRLSVY 254


>gi|254191317|ref|ZP_04897821.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938989|gb|EDO94659.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 481

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 231

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 232 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 265


>gi|53719973|ref|YP_108959.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei K96243]
 gi|52210387|emb|CAH36368.1| putative oxygen-independent coproporphyrinogen oxidase
           [Burkholderia pseudomallei K96243]
          Length = 481

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAEHNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 231

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 232 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 265


>gi|126454666|ref|YP_001067005.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1106a]
 gi|167739458|ref|ZP_02412232.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 14]
 gi|167846571|ref|ZP_02472079.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei B7210]
 gi|242314161|ref|ZP_04813177.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
 gi|126228308|gb|ABN91848.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106a]
 gi|242137400|gb|EES23802.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|167720467|ref|ZP_02403703.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei DM98]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|254184283|ref|ZP_04890873.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
 gi|184214814|gb|EDU11857.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|288929078|ref|ZP_06422924.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288330062|gb|EFC68647.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 455

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 2/196 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL+A + +      N +  Y+H PFC   C YC  NS         E +  +   E+  
Sbjct: 33  EYLAAVDQSNNAAVDN-ISFYIHVPFCQHLCHYCGCNSVAMARNEVVEAYFDALHREINL 91

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+P+ I   +I  + + +  ++    N EI IE +P+ +   
Sbjct: 92  LLPHLDKGRKISQIHYGGGSPTSIPLHHIKRLNEHLLGSFGTIENPEIAIECHPAYLNDE 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +++     G  R SLG+Q  +E  LR + R  +       +   R    +++ D IY LP
Sbjct: 152 HWEQLIGCGFTRYSLGIQDFDENVLRTVNRRPSLLPVEHIVERLRQSGAKVNLDFIYGLP 211

Query: 181 KQTMTQWEMELQRALS 196
            QT+  +   + RA+ 
Sbjct: 212 GQTVQSFARTIARAID 227


>gi|167816662|ref|ZP_02448342.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 91]
 gi|254259589|ref|ZP_04950643.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
 gi|254296946|ref|ZP_04964399.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
 gi|157808050|gb|EDO85220.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
 gi|254218278|gb|EET07662.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|53713204|ref|YP_099196.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
 gi|52216069|dbj|BAD48662.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis YCH46]
          Length = 454

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 2   KYLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +YL A +   + Q S ++L  Y+H PFC   C YC  NS    Y + +   I+S++  + 
Sbjct: 32  RYLEAVQQ--SNQASEHALSFYLHIPFCRHLCHYCGCNS----YPMARPEIIESYVEALH 85

Query: 61  WMRQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
               L  P     R I+ I +GGG+P+ I    I  +   +  ++      EI IE +P 
Sbjct: 86  QEIDLILPLLDKDRPIAQIHYGGGSPTAIPVALIKELNAHLLSSFPAIDRPEIAIECHPG 145

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
            +   ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D 
Sbjct: 146 YLSEKDWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDF 205

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +Y LPKQT+  +   +++A+  + D L ++
Sbjct: 206 LYGLPKQTVENFTRNIEQAILLSPDRLVMF 235


>gi|88706654|ref|ZP_01104357.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
 gi|88699150|gb|EAQ96266.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
          Length = 447

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 2/190 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFF 76
           +L VY+H PFC  +C  CD  + V       ++++ +   E+Q +    G  R +  +  
Sbjct: 55  ALSVYIHLPFCPSRCLSCDHQTTVSHDHKQIDHYLDTLEIEVQLVTDHLGRNRRLQQLHL 114

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +    +  ++D + K + + +  E ++EAN     V+        G   ++L 
Sbjct: 115 GGGTPNYLSELQLVRLVDILDKYFVIDAQTESSLEANAHRASVSQLSLLHGLGFRNLNLE 174

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           ++ L+    + LGR+ +       +  AR I F  ++ DL+Y LP Q+ +  +  ++  L
Sbjct: 175 LRDLDPTVQQALGRHQSLPVVRDVVETARQIGFTTVATDLVYGLPMQSASSVQKTVEELL 234

Query: 196 SYAVDHLSLY 205
           +   D +S +
Sbjct: 235 ALEPDRVSCF 244


>gi|126439546|ref|YP_001059721.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 668]
 gi|167903538|ref|ZP_02490743.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei NCTC
           13177]
 gi|167911789|ref|ZP_02498880.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 112]
 gi|126219039|gb|ABN82545.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 668]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|254195878|ref|ZP_04902304.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
 gi|169652623|gb|EDS85316.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
          Length = 481

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 231

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 232 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 265


>gi|167895153|ref|ZP_02482555.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 7894]
 gi|167919791|ref|ZP_02506882.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei BCC215]
          Length = 483

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|149922584|ref|ZP_01911013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
 gi|149816540|gb|EDM76036.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
          Length = 480

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 15/239 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           +  L +Y H PFC  KC YC+F    R        ++   + E++ +  +L    SI  I
Sbjct: 65  AEPLLLYCHVPFCATKCHYCNFAVDTRSRPSLHGRYVDGLVRELERLDARLPASTSIGGI 124

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-----ITIEANPS--SVEVNNFQGYRK 127
             GGGTP+L+E   +  +L  +A     + +       ++IE  P+  + E +       
Sbjct: 125 DIGGGTPTLLEVDALDRLLAALAPFADRARDSPFAFGPVSIETTPAIAAREPDKLARLAN 184

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNAS------EAIAAIHLARNIFPRMSFDLIYALPK 181
            GV RIS+GVQS +  +L  L R  + S      +A A  +L    F R++ DLI+ LP 
Sbjct: 185 GGVARISMGVQSTDAATLEALNRGRHGSAAGTDLQARALANLRGAGFERVNVDLIFGLPD 244

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQ-LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           Q++ QW  +L   L+ A D ++ Y  L   KG +  + H       P+      LY+L 
Sbjct: 245 QSLDQWRRDLDTVLAAAPDSITTYDCLYRGKGRVLTRKHDASGRPRPTPERYAALYDLA 303


>gi|76809126|ref|YP_334202.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1710b]
 gi|76578579|gb|ABA48054.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710b]
          Length = 481

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 231

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 232 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 265


>gi|328883537|emb|CCA56776.1| coproporphyrinogen III oxidase [Streptomyces venezuelae ATCC 10712]
          Length = 489

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 20/201 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQS---FLTEMQWMRQLTGP 68
           +Y H P C   C +C++    R    G+E+          I+    +L    W+ Q    
Sbjct: 68  LYFHLPLCNYICHFCNYVK--RLVPRGKEDPSLRLWSDLLIEESRRYLDRFDWLSQA--- 122

Query: 69  RSISSIFFGGGTPSLI--EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             + S + GGGT +L+   P+ I  ++    +N+ +S NVE  IE NP + + ++ +   
Sbjct: 123 -RVESFYIGGGTAALLLNSPEYIEPLVRHARENYDLSDNVEFNIEGNPENFQRHHLETAL 181

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             G NR SLGVQSL+++   F  R H+++++I AI          + D+++ LP QT   
Sbjct: 182 GLGFNRFSLGVQSLQDEVNDFTKRRHSSAQSIEAIENLLATGCPFNVDMMFGLPYQTPES 241

Query: 187 WEMELQRALSYAVDHLSLYQL 207
              ++       V  +++Y+L
Sbjct: 242 VRRDMTILTDLGVPTITIYRL 262


>gi|265763300|ref|ZP_06091868.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_16]
 gi|263255908|gb|EEZ27254.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_16]
 gi|301162929|emb|CBW22476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 638R]
          Length = 454

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 2   KYLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +YL A +   + Q S ++L  Y+H PFC   C YC  NS    Y + +   I+S++  + 
Sbjct: 32  RYLEAVQQ--SNQASEHALSFYLHIPFCRHLCHYCGCNS----YPMARPEIIESYVEALH 85

Query: 61  WMRQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
               L  P     R I+ I +GGG+P+ I    I  +   +  ++      EI IE +P 
Sbjct: 86  QEIDLILPLLDKDRPIAQIHYGGGSPTAIPVALIKELNAHLLSSFPAIDRPEIAIECHPG 145

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
            +   ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D 
Sbjct: 146 YLSEKDWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDF 205

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +Y LPKQT+  +   +++A+  + D L ++
Sbjct: 206 LYGLPKQTVENFTRNIEQAILLSPDRLVMF 235


>gi|254428599|ref|ZP_05042306.1| oxygen-independent coproporphyrinogen III oxidase [Alcanivorax sp.
           DG881]
 gi|196194768|gb|EDX89727.1| oxygen-independent coproporphyrinogen III oxidase [Alcanivorax sp.
           DG881]
          Length = 457

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 4/191 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFG 77
           L +Y+H PFC   C YC  N  V   K     ++Q    E++    ++   R ++ + +G
Sbjct: 51  LSLYMHIPFCDSVCYYCACNRIVTANKARGAEYLQLLKREIKRKATRVDKRRPVTQMHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ ++   +  ++  +A+++ +  +   +  IE +P +V+ +     R  G NR+SL
Sbjct: 111 GGTPTFLDDGQLTELVYDLARHFNLRDDERSDYAIEIDPRTVDQSRLGLLRGLGFNRVSL 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+ +  + + R          +  +R+  F  ++ DLIY LP Q+ +     L+R 
Sbjct: 171 GVQDLDPRVQKAVNRVQPYELIRDTMAWSRDFGFRSINTDLIYGLPWQSESSLARTLERL 230

Query: 195 LSYAVDHLSLY 205
           L    D +SLY
Sbjct: 231 LPLRPDRISLY 241


>gi|21328601|gb|AAM48608.1| oxygen-independent coproporphyrinogen III oxidase [uncultured
           marine proteobacterium]
          Length = 437

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 15/284 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIF 75
           ++  +YVH PFC  +C  CD  + +       + ++ S  TE+  M Q + G   I+ + 
Sbjct: 50  DATALYVHIPFCPSRCLSCDHLTIIEHDHRAIDRYLDSLSTELSLMAQSSRGALLINRVH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGG+P+ +    +A ++  I    TVS + EI++E NP     +  +     GV  + L
Sbjct: 110 IGGGSPNYLSDGQMARLMGSIHTALTVSPDAEISMEINPRRTSRSQLELLHGLGVRNLHL 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
            V+ ++      LGR  + S       +AR + F  ++ DL++ LP QT    +  +   
Sbjct: 170 EVRDVDGNVQNELGRTQSFSLLEDVYSIAREMKFDSINMDLVFGLPGQTSKTIKGSIALI 229

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-----LTQSITSAHGLH 249
                D L   Q T       ++   D +  +PS    + ++N     L +      GL+
Sbjct: 230 AELGPDMLVCQQYTRRPQQFPHQAAID-ERAMPSLAEKLAIFNAVAVGLEEEGYDWVGLN 288

Query: 250 AYEISNHSFLGAESLHNLNYWRYG-------DYIGIGPGAHSRV 286
           A+    H    A+   +L+Y  +G         +G G GA S V
Sbjct: 289 AFVRPGHKLATAQREGSLSYSAFGYAETRVSQTLGAGLGAVSEV 332


>gi|261838095|gb|ACX97861.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 51]
          Length = 457

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|256820783|ref|YP_003142062.1| coproporphyrinogen III oxidase [Capnocytophaga ochracea DSM 7271]
 gi|256582366|gb|ACU93501.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea DSM 7271]
          Length = 454

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
           +  + +Y+H PFC   C +C  +  + +    +  +I++ L E Q        R  I  I
Sbjct: 49  TEGISLYIHLPFCESLCTFCGCHKRITKRHEMEAPYIEAILKEWQLYTDFLKERPRIKEI 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+  EP  +  +++GI +    +   E + E +P++    + Q     G  R+S
Sbjct: 109 HLGGGTPTFFEPLQLRRLIEGIFERADKADAHEFSFEGHPNNTTETHLQTLYDLGFRRVS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ    +  + + R             AR I +  +S DL++ LP QT+      + R
Sbjct: 169 YGVQDYSPKIQKAIHRIQPFENVKRVTQQARAIGYTSVSHDLVFGLPFQTLDDVLFTIDR 228

Query: 194 ALSYAVDHLSLY 205
           + +   D ++ Y
Sbjct: 229 SNTLRPDRIAFY 240


>gi|319777803|ref|YP_004134233.1| oxygen-independent coproporphyrinogen iii oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171522|gb|ADV15059.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 449

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 106/205 (51%), Gaps = 8/205 (3%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A EN       + + +Y+H P+C + C +C  ++   R+      +++S   E+  +
Sbjct: 37  WLEALENG------DEISLYLHIPYCDRLCWFCACHTKQTRHYEPVTAYLRSLHAEIATV 90

Query: 63  RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            ++ G ++ + ++ FGGG+P++++ +++ ++   +  ++    + +I++E +P+ ++   
Sbjct: 91  ARIVGGKAGVRAVHFGGGSPTMLKSEDMVVLGKALRSSFDFLPDAKISVEIDPNDMDDAR 150

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                + G+ R SLGVQ  + +  + + R  +  +  A I   R+     ++ DL+Y LP
Sbjct: 151 LDALAEIGMTRASLGVQDFDLKVQKAINREQSFLQTKAVIDGVRSRGVESVNLDLLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY 205
            QT       + +AL+   D ++L+
Sbjct: 211 HQTRESVSSTVAQALTLEPDRMALF 235


>gi|326572287|gb|EGE22282.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC8]
          Length = 469

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + +      +++     E++  + L  G   +  +  G
Sbjct: 65  LSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTWVKQLHLG 124

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G NR+S GV
Sbjct: 125 GGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGFNRLSFGV 184

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTMTQWEM 189
           Q L+++    + R       + ++ L +N+        F   + DLIY LP QT      
Sbjct: 185 QDLDKKVQIAVNR-------VQSLELIQNVMQEAQALGFSSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +  + D LS++
Sbjct: 238 TIEQIIKLSPDRLSVF 253


>gi|67641813|ref|ZP_00440580.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|124385948|ref|YP_001028839.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10229]
 gi|126451435|ref|YP_001081249.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10247]
 gi|254199302|ref|ZP_04905668.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|254205615|ref|ZP_04911967.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|254357773|ref|ZP_04974046.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|124293968|gb|ABN03237.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126244305|gb|ABO07398.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147748898|gb|EDK55972.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|147753058|gb|EDK60123.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|148026900|gb|EDK84921.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|238522803|gb|EEP86245.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
          Length = 483

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPESFSRTLDEVIRLSPERIAVY 267


>gi|53725698|ref|YP_102403.1| coproporphyrinogen III oxidase [Burkholderia mallei ATCC 23344]
 gi|52429121|gb|AAU49714.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 23344]
          Length = 481

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 231

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 232 NIDLIYGLPRQTPESFSRTLDEVIRLSPERIAVY 265


>gi|167825064|ref|ZP_02456535.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 9]
 gi|217421117|ref|ZP_03452622.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|226199993|ref|ZP_03795543.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
 gi|217396529|gb|EEC36546.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|225928049|gb|EEH24086.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
          Length = 483

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMCALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPASFSRTLDEVIRLSPERIAVY 267


>gi|326565657|gb|EGE15820.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 12P80B1]
 gi|326567122|gb|EGE17244.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC1]
          Length = 469

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + +      +++     E++  + L  G   +  +  G
Sbjct: 65  LSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTWVKQLHLG 124

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G NR+S GV
Sbjct: 125 GGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGFNRLSFGV 184

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTMTQWEM 189
           Q L+++    + R       + ++ L +N+        F   + DLIY LP QT      
Sbjct: 185 QDLDKKVQIAVNR-------VQSLELIQNVMQEAQALGFSSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +  + D LS++
Sbjct: 238 TIEQIIKLSPDRLSVF 253


>gi|300726318|ref|ZP_07059770.1| coproporphyrinogen dehydrogenase [Prevotella bryantii B14]
 gi|299776343|gb|EFI72901.1| coproporphyrinogen dehydrogenase [Prevotella bryantii B14]
          Length = 453

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 3/195 (1%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQW 61
           YL A E++    GS  L  Y H+PFC + C YC  NS++      Q   ++ +   E+  
Sbjct: 31  YLKAIEDS-NQVGSKKLSFYFHFPFCRRLCHYCGCNSYMMPQDKSQVARYVDALHHEIDL 89

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + + L   R IS I +GGG+PS++    +  + + I   +      EI IE +P  +   
Sbjct: 90  VAKHLDPTRPISQIHYGGGSPSVLPTSILQELNEHILSLFPKIEKPEIAIECHPGYLSAA 149

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +++    +   R S+GVQ  +E+ L+ +GR  +       + +       ++ D +Y LP
Sbjct: 150 DWEALCNSHFTRFSIGVQDTDEKVLKAVGRTPSQMPIPEIVSILHAHGATVNTDFLYGLP 209

Query: 181 KQTMTQWEMELQRAL 195
            QT   +  ++Q+ +
Sbjct: 210 YQTPDTFVQDIQKTI 224


>gi|121600015|ref|YP_993700.1| coproporphyrinogen III oxidase [Burkholderia mallei SAVP1]
 gi|167001125|ref|ZP_02266926.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
 gi|121228825|gb|ABM51343.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei SAVP1]
 gi|243063072|gb|EES45258.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
          Length = 483

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 233

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 234 NIDLIYGLPRQTPESFSRTLDEVIRLSPERIAVY 267


>gi|228907630|ref|ZP_04071487.1| hypothetical protein bthur0013_17970 [Bacillus thuringiensis IBL
           200]
 gi|228852122|gb|EEM96919.1| hypothetical protein bthur0013_17970 [Bacillus thuringiensis IBL
           200]
          Length = 450

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 141/340 (41%), Gaps = 24/340 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSI 71
           Q      +Y+H PFC   C +C F    +   +  E +++  + EM+ +    +    + 
Sbjct: 42  QKKGKTALYLHIPFCDTICSFCPFIKSTKYEPIIGE-YVECLIKEMELLSSSPVIQALTF 100

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             IF GGGTPS++ P  I  +   I KN+ +S + E T E    + +          G N
Sbjct: 101 DVIFVGGGTPSVLTPTLIEKLTTAINKNFKLSPDYEWTFECEAKTADEERIAAMAAGGAN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R S GVQ+L  +  +      +  +    +   +  F   + DL+Y LP Q+  +   +L
Sbjct: 161 RGSFGVQTLNPKYRKLFNLTSSYEQIQHTVETMKRYFKSYNLDLLYQLPGQSEKELIDDL 220

Query: 192 QRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              +   + ++D   L  +   KG L  K+ K G +  P        YN    IT  H  
Sbjct: 221 NAVMELGTTSIDAYPLEYIACSKGWL-NKITK-GSIPRPPTPAEKIKYN---RITYDHFR 275

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDY---------IGIGPGAHSRVKVGSHRVAISIEK 299
           ++     + +      H    ++YG+          IG+G GA + ++     +  + E 
Sbjct: 276 NSGWNQKYVYTFMAPGHEEKRFKYGEIIYGGYEDQCIGLGTGAVTYMQ----GITWANEG 331

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
           + + +++ ++++G AV +     +  +   F    +RL +
Sbjct: 332 NTQKYIEQIKEHGLAVAKSRLYHAYDRRFIFFPKTMRLEK 371


>gi|163785932|ref|ZP_02180380.1| O2-independent coproporphyrinogen III oxidase [Flavobacteriales
           bacterium ALC-1]
 gi|159877792|gb|EDP71848.1| O2-independent coproporphyrinogen III oxidase [Flavobacteriales
           bacterium ALC-1]
          Length = 454

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 2/197 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPR 69
           +    S  L +Y+H PFC   C +C  +  + +    +  +I++ L E    R+L  G  
Sbjct: 44  LESNSSEGLSLYLHLPFCESLCTFCGCHKRITKRHEVESPYIKALLKEWSLYRKLLDGKP 103

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +  GGGTP+   P+N+  ++  + K   ++ + E + E +P++    + Q     G
Sbjct: 104 KIKELHLGGGTPTFFSPENLEFLISELLKVSDLAEDYEFSFEGHPNNTTEEHLQTLFDLG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             R+S GVQ    +    + R            LAR I +  +  D+I+ LP QT     
Sbjct: 164 FRRVSFGVQDYNIKVQIAIHRIQPFENVKRVTELARKIGYTSVGHDIIFGLPFQTEADVI 223

Query: 189 MELQRALSYAVDHLSLY 205
             + +  +   D ++ Y
Sbjct: 224 ETINKTETLMPDRIAFY 240


>gi|254177477|ref|ZP_04884132.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
 gi|160698516|gb|EDP88486.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
          Length = 489

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 68  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 127

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 128 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 187

Query: 121 NFQGYRKAGVNRISLGVQSLEE---------QSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             Q     G NR S GVQ  +          Q L  + R   AS A          F  +
Sbjct: 188 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAG--------FESV 239

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + DLIY LP+QT   +   L   +  + + +++Y
Sbjct: 240 NIDLIYGLPRQTPESFSRTLDEVIRLSPERIAVY 273


>gi|317178972|dbj|BAJ56760.1| coproporphyrinogen III oxidase [Helicobacter pylori F30]
          Length = 457

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  + ++I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTHYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|326566225|gb|EGE16377.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 103P14B1]
          Length = 469

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + +      +++     E++  + L  G   +  +  G
Sbjct: 65  LSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTWVKQLHLG 124

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G NR+S GV
Sbjct: 125 GGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGFNRLSFGV 184

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTMTQWEM 189
           Q L+++    + R       + ++ L +N+        F   + DLIY LP QT      
Sbjct: 185 QDLDKKVQIAVNR-------VQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +  + D LS++
Sbjct: 238 TIEQIIKLSPDRLSVF 253


>gi|217033705|ref|ZP_03439132.1| hypothetical protein HP9810_5g47 [Helicobacter pylori 98-10]
 gi|216943894|gb|EEC23331.1| hypothetical protein HP9810_5g47 [Helicobacter pylori 98-10]
          Length = 457

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I + +   S N+E++ E +P     ++ 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQNIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|145298845|ref|YP_001141686.1| coproporphyrinogen III oxidase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851617|gb|ABO89938.1| coproporphyrinogen III oxidase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 455

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 31/228 (13%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDF------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           G  ++   +Y+H PFC K+C +C+F       + + RY     + +            L 
Sbjct: 52  GSQADERALYIHVPFCRKRCSFCNFFENGANPARMSRYMAALCDSLNRAADT-----PLA 106

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  S+++ GGGTP+ +  +++A +   I + + ++ + E+T+E   +  +   +Q   
Sbjct: 107 QSRPFSAVYVGGGTPTDMALEDLARLARAI-QRFPLTLDAEVTLEGRLNGFDDAKWQTAL 165

Query: 127 KAGVNRISLGVQSLE----EQSLRF------LGRNHNASEAIAAIHLARNIFPRMSFDLI 176
             G NR S GVQS +    +Q+ RF      L R    ++  AA+ +A         DLI
Sbjct: 166 AGGFNRFSFGVQSFDTRVRQQAARFDDRQTLLARLGELTQDDAAVIVA---------DLI 216

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + LP Q    W  ++   ++  V  + LYQL    GT   +    G L
Sbjct: 217 FGLPGQDDEVWRQDIADVMASGVHGVDLYQLIPMAGTNLERAEASGKL 264


>gi|296113817|ref|YP_003627755.1| oxygen-independent coproporphyrinogen III oxidase [Moraxella
           catarrhalis RH4]
 gi|295921511|gb|ADG61862.1| oxygen-independent coproporphyrinogen III oxidase [Moraxella
           catarrhalis RH4]
          Length = 469

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + +      +++     E++  + L  G   +  +  G
Sbjct: 65  LSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTWVKQLHLG 124

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G NR+S GV
Sbjct: 125 GGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGFNRLSFGV 184

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTMTQWEM 189
           Q L+++    + R       + ++ L +N+        F   + DLIY LP QT      
Sbjct: 185 QDLDKKVQIAVNR-------VQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +  + D LS++
Sbjct: 238 TIEQIIKLSPDRLSVF 253


>gi|326564474|gb|EGE14700.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 46P47B1]
 gi|326568386|gb|EGE18466.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC7]
 gi|326574301|gb|EGE24248.1| coproporphyrinogen III oxidase [Moraxella catarrhalis O35E]
 gi|326574885|gb|EGE24815.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 101P30B1]
 gi|326576209|gb|EGE26124.1| coproporphyrinogen III oxidase [Moraxella catarrhalis CO72]
          Length = 469

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + +      +++     E++  + L  G   +  +  G
Sbjct: 65  LSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTWVKQLHLG 124

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G NR+S GV
Sbjct: 125 GGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGFNRLSFGV 184

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTMTQWEM 189
           Q L+++    + R       + ++ L +N+        F   + DLIY LP QT      
Sbjct: 185 QDLDKKVQIAVNR-------VQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +  + D LS++
Sbjct: 238 TIEQIIKLSPDRLSVF 253


>gi|326562161|gb|EGE12489.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 7169]
          Length = 469

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 16/196 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +Y+H PFC   C YC  N  + +      +++     E++  + L  G   +  +  G
Sbjct: 65  LSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTWVKQLHLG 124

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G NR+S GV
Sbjct: 125 GGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGFNRLSFGV 184

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--------FPRMSFDLIYALPKQTMTQWEM 189
           Q L+++    + R       + ++ L +N+        F   + DLIY LP QT      
Sbjct: 185 QDLDKKVQIAVNR-------VQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLY 205
            +++ +  + D LS++
Sbjct: 238 TIEQIIKLSPDRLSVF 253


>gi|269216488|ref|ZP_06160342.1| radical SAM domain protein [Slackia exigua ATCC 700122]
 gi|269130017|gb|EEZ61099.1| radical SAM domain protein [Slackia exigua ATCC 700122]
          Length = 438

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 98/193 (50%), Gaps = 17/193 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC + CPYC FN    R+   +   + + ++   EM  +++L       S++ G
Sbjct: 40  LYMHIPFCERLCPYCSFN----RFPFNEGRAKAYYENLRREMMMVKELG--YDFDSLYIG 93

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++  + +   +D   + +++    +++ E NP+ +    +    +  VNR+S+GV
Sbjct: 94  GGTPTILLDE-LCKTIDAAKREFSIK---DVSCETNPNHL-TEPYLSELEGRVNRLSVGV 148

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++  L+ + R     +A+  + A+ +A   F  M+ D+I+  P QT      +L+  
Sbjct: 149 QSFDDGLLKQMDRYDKYGDAASIMEAVKIAAPYFDSMNVDMIFNFPAQTEDILRRDLEAV 208

Query: 195 LSYAVDHLSLYQL 207
           +    +  + Y L
Sbjct: 209 IETGCNQTTFYPL 221


>gi|308063542|gb|ADO05429.1| coproporphyrinogen III oxidase [Helicobacter pylori Sat464]
          Length = 457

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKKSFLKTLELVLKLDPDRLAVF 242


>gi|228471848|ref|ZP_04056619.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276778|gb|EEK15481.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 453

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 3/207 (1%)

Query: 2   KYLSAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   + T   S   + +Y+H PFC   C +C  + H+ +    ++ +IQ+ L E +
Sbjct: 33  KWLDSVRTSFTESNSTQGISLYIHLPFCESLCTFCGCHKHITKRHEMEDPYIQNVLKEWR 92

Query: 61  -WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            ++  L     I  I  GGGTP+   P+N+  ++D I +    +   + + E +P++   
Sbjct: 93  LYLAVLPSRPRIKEIHLGGGTPTFFSPENLQYLIDQIFEGADRAEGFQFSFEGHPNNTTR 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
            + Q     G  R+S GVQ    +  + + R    +        AR I +  +S DL++ 
Sbjct: 153 EHLQRLYDLGFTRVSYGVQDYSPEVQKAIHRIQPFANVERVTLQAREIGYSSISHDLVFG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLY 205
           LP Q        +        D +S Y
Sbjct: 213 LPFQKEEDMRYTIDCTNRLRPDRISFY 239


>gi|297379865|gb|ADI34752.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori v225d]
          Length = 457

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S  +E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQEIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|258544507|ref|ZP_05704741.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
 gi|258520242|gb|EEV89101.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
          Length = 460

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 5/196 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISS 73
            +  L +YVH PFC   C YC  N  + R     + ++     ++        P R +  
Sbjct: 48  AARDLSLYVHIPFCEHVCYYCGCNKIITRNHDQSDEYLDQLERDIARQAAHIDPSRRVIQ 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKN---WTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  GGGTP+ +    +  +L  + ++   +      E +IE +P +V  ++ +  R+ G 
Sbjct: 108 LHLGGGTPTFLNHTQLRRLLAMLHEHFPRFAADDTGEYSIEIDPRTVSPDDLRFLRELGF 167

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ  +    + + R          I  AR+  +  +S DLIY LP QT+  +  
Sbjct: 168 NRVSFGVQDFDPAVQQAVNRIQGFEHVRDTIAAARDAGYHSISADLIYGLPLQTVRTFSR 227

Query: 190 ELQRALSYAVDHLSLY 205
            L++    A D L+++
Sbjct: 228 TLEQIRELAPDRLAVF 243


>gi|332709557|ref|ZP_08429518.1| coproporphyrinogen III oxidase family Fe-S oxidoreductase [Lyngbya
           majuscula 3L]
 gi|332351816|gb|EGJ31395.1| coproporphyrinogen III oxidase family Fe-S oxidoreductase [Lyngbya
           majuscula 3L]
          Length = 440

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 12/270 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGG 78
           +Y+H P+C   C +C F+  V +     + + +    EM+ + +L      S  +++FGG
Sbjct: 38  LYLHIPYCHDMCRFCPFHVRVDKGSEIYDRYTEVLCKEMELVAKLPYVSDMSFKAVYFGG 97

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGV 137
           G+PS+    N+  I   ++K + +  N EI+ E  P ++ +       ++  V RIS G+
Sbjct: 98  GSPSIFSVNNLRKIFAHLSKCFQIEPNAEISFEGEPKTLSDPARLDLLKEYNVKRISFGL 157

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +E+            +       AR   F  ++ D++Y LP Q +T    +L     
Sbjct: 158 QTYDERMRELFNIAATLQDVDNCTKNARERGFEDINVDMMYDLPGQDITALNYDLAHLKD 217

Query: 197 YAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSENVAVDLYNLTQSI-TSAHGLHAYEIS 254
           +  D L  Y L         KM  KDG   +PS+      + L Q + T+   +  Y+++
Sbjct: 218 HDFDSLDYYNLHYFAFPKKIKMGMKDG--TIPSKPSQQMHFALQQQVRTTLKEMGYYDVA 275

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           +  F  A+      Y+R     G G G HS
Sbjct: 276 DPIF--AKKPQVCEYFRL--IWGGGKGDHS 301


>gi|260463697|ref|ZP_05811895.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|319785183|ref|YP_004144659.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|259030551|gb|EEW31829.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|317171071|gb|ADV14609.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 448

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
            + + +YVH PFC + C +C  ++   R+      ++ S   E+  +  L G +  + ++
Sbjct: 44  DDEISLYVHIPFCDRLCWFCACHTKQTRHYEPVTRYLGSLHAEIATVSGLAGGKGRVRAV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGG+P+++ P ++  +   +  +++      I++E  P+ ++        + G+ R S
Sbjct: 104 HLGGGSPTMLRPDDMVALGTALRHSFSFLPGTRISVEIEPNDMDEARLDALAEIGMTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ L+++  R + R     +    +   R+     ++ DL+Y LP QT       +++
Sbjct: 164 LGVQDLDQKVQRAINREQTFLQTKTVVDGVRSRGVESVNLDLLYGLPHQTREIVLSTVRQ 223

Query: 194 ALSYAVDHLSLY 205
           AL+   D ++L+
Sbjct: 224 ALTLEPDRIALF 235


>gi|257459170|ref|ZP_05624289.1| coproporphyrinogen III oxidase [Campylobacter gracilis RM3268]
 gi|257443555|gb|EEV18679.1| coproporphyrinogen III oxidase [Campylobacter gracilis RM3268]
          Length = 450

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 44/326 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC   CPYC F+ +   Y+ G  + +  +  TEMQ  R         +++ GGG
Sbjct: 49  LYMHVPFCHTFCPYCSFHKYA--YERGACKAYFSALRTEMQ--RTKDAGYDFETLYVGGG 104

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           T +LI+   +A  L+ +AK  ++ S  E++ E++P+ +E  +   +R   ++R+S+GVQS
Sbjct: 105 T-TLIDEDELARTLE-LAK--SLFSIKEVSCESDPNHIEPESLLRFR-GLIDRLSVGVQS 159

Query: 140 LEEQSLRFLGRNHN-ASEAIAAIHLAR--NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            ++  LR   R     S  I    L+R   I P +S DLI+  P QT      +++ A +
Sbjct: 160 FDDDILRKASRYEKFGSGEILQEKLSRAVGILPILSLDLIFNFPFQTREILLRDIEAAKA 219

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV--AVDLYN-LTQSITSAHGLHAYEI 253
              + ++LY L   K  L   M       L   NV    + Y+ + +  +S H  +A+  
Sbjct: 220 VKPEQITLYPLM--KSPL---MRDQIARSLGVSNVDHEEEFYSIICKEFSSWHRSNAWAF 274

Query: 254 SNHSFLGAESLHNLNYWRYG---DYIGIGPGAHS----RVKVGSHRVAISIEKHPESWLK 306
                  A    N+N    G   +Y+GIG GA S    R+ V +  +        E +  
Sbjct: 275 -------AREKSNINDEYVGTNHEYVGIGSGAFSFLDGRLLVNAFNL--------EDYAS 319

Query: 307 MVRKNGHAVVEK-EFLSSEQQADEFL 331
            VRKN   V+   +F  SE+    FL
Sbjct: 320 RVRKNESTVIATCDFSRSERAKYLFL 345


>gi|213963740|ref|ZP_03391990.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sputigena Capno]
 gi|213953620|gb|EEB64952.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sputigena Capno]
          Length = 454

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
           +  + +Y+H PFC   C +C  +  + +    +  +I++ L E Q        R  I  I
Sbjct: 49  TEGISLYIHLPFCESLCTFCGCHKRITKRHEMEIPYIEAVLKEWQLYTDFLKERPRIKEI 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+  +P  +  +++GI +      N E + E +P++    + Q     G  R+S
Sbjct: 109 HLGGGTPTFFQPSQLRRLIEGIFERADRVENYEFSFEGHPNNTTEAHLQTLYNLGFKRVS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ    +  + + R             AR I +  +S DL++ LP QT+      + +
Sbjct: 169 YGVQDYSPKVQKAIHRLQPFENVQRVTEQARTIGYTSVSHDLVFGLPFQTLDDVLFTIDK 228

Query: 194 ALSYAVDHLSLY 205
           + +   D ++ Y
Sbjct: 229 SNTLRPDRIAFY 240


>gi|157164693|ref|YP_001466100.1| coproporphyrinogen III oxidase [Campylobacter concisus 13826]
 gi|112800526|gb|EAT97870.1| coproporphyrinogen III oxidase [Campylobacter concisus 13826]
          Length = 454

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRS 70
           T +      +Y H PFC   CPYC F+    +Y   QE     F    + MRQ+      
Sbjct: 39  TPKKDKKYMLYAHVPFCHTFCPYCSFH----KYHYEQELAKIYFENLREEMRQIKEAGFD 94

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----EITIEANPSSV---EVNNFQ 123
            SS++ GGGT  + EP+        + K   ++ ++    +I+ E++P+ +    ++ F 
Sbjct: 95  FSSLYVGGGTTLINEPE--------LEKTLKLAKDLFSIEDISAESDPNHISPESLSRFD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALP 180
           G     +NR+S+GVQS ++++L+ +GR     +A E    +  A    P +S DLI+ LP
Sbjct: 147 GL----INRLSVGVQSFDDETLKRVGRYEKFGSAEETKRKLEQAIGKIPVISLDLIFNLP 202

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQL 207
            QT  Q   ++  A S +   ++ Y L
Sbjct: 203 NQTKEQLINDINTAKSISPQQITFYPL 229


>gi|87124518|ref|ZP_01080367.1| coproporphyrinogen III oxidase [Synechococcus sp. RS9917]
 gi|86168090|gb|EAQ69348.1| coproporphyrinogen III oxidase [Synechococcus sp. RS9917]
          Length = 453

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 22/287 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQ-LTGPRSISSIF 75
           L +YVH PFC   C YC  N    +   KV  E ++ S   E++ + + +   R +S + 
Sbjct: 54  LSLYVHVPFCRHACWYCGCNRITTQLGSKV-VEPYLASLAQELELITEAMPQRRRLSQMH 112

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +  +  A + + I +++    ++E +IE NP  +  +     R+ G NRIS 
Sbjct: 113 WGGGTPNYLNREETAQLWELIRRHFDFDDDLEASIEVNPEGLSRDAACQLRELGFNRISF 172

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +      + R    ++   A+   R   F  ++ DLI  LP QT  ++   L+  
Sbjct: 173 GIQDADPDVQNAVNRVVPETQLRCAMLWLREAGFESVNVDLICGLPLQTPERFHRTLELV 232

Query: 195 LSYAVDHLSLYQLTI--EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                D +SL+      E+  +  K+  +    LPS+   + +      +  A+G  A  
Sbjct: 233 QELRPDRISLFSFAYLPEQLPMQRKIQAED---LPSQRQRLSMLEHANQLLCANGYDAIG 289

Query: 253 ISNHSFLG---AES-----LH-NLNYWRYG---DYIGIGPGAHSRVK 287
           + +++      AE+     LH N   +  G   D +GIGP A S+ +
Sbjct: 290 MDHYALHDDGLAEAAREGRLHRNFQGYTTGGELDLLGIGPSAISQFR 336


>gi|126664015|ref|ZP_01735009.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BAL38]
 gi|126623964|gb|EAZ94658.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BAL38]
          Length = 454

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SS 73
            +  + +Y+H PFC   C +C  N  + +    ++ +I + + E +   +L   + I   
Sbjct: 48  AAEGISLYIHLPFCESLCTFCGCNKRITKRHEVEDPYITAIIKEWKLYCELFPTQPIIKE 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+   P+N+  +++GI    T +   E + E +P++    + Q     G  R+
Sbjct: 108 IHLGGGTPTFFSPENLERLINGIFDYATKAPEHEFSFEGHPNNTTKQHLQKLYNIGFRRV 167

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ         + R             A+ I +  +  DLI+ LP Q +   +  + 
Sbjct: 168 SFGVQDYSPHVQEAIHRVQPFHNVAKVTFWAKEIGYTSIGHDLIFGLPFQNLHDVQDTID 227

Query: 193 RALSYAVDHLSLY 205
           +  S   D L+ Y
Sbjct: 228 KTKSLFPDRLAFY 240


>gi|117923344|ref|YP_863961.1| coproporphyrinogen III oxidase anaerobic [Magnetococcus sp. MC-1]
 gi|117607100|gb|ABK42555.1| coproporphyrinogen III oxidase, anaerobic [Magnetococcus sp. MC-1]
          Length = 468

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIF 75
             L +Y H PFC   C YC  N  +   +     +++  L E+  M  L    R +  + 
Sbjct: 58  KPLSLYFHIPFCDTVCYYCACNKVITPDRARGARYLEYLLQEVARMGALFDRKREVVQLH 117

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGVNRI 133
            GGGTP+ ++   +  + D +  ++T+  +   E + EA+P  + V    G RK G+NRI
Sbjct: 118 LGGGTPTYLDNGQLQRLWDAVNAHFTLVEDARGEYSFEADPRELPVGAVAGLRKMGMNRI 177

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           S+GVQ L+    + + R          +  AR+  +  ++ DLIY LP Q+
Sbjct: 178 SIGVQDLDPVVQKAVNRIQPLDLTKRVVDEARDSGYASVNVDLIYGLPFQS 228


>gi|307545439|ref|YP_003897918.1| oxygen-independent coproporphyrinogen III oxidase [Halomonas
           elongata DSM 2581]
 gi|307217463|emb|CBV42733.1| oxygen-independent coproporphyrinogen III oxidase [Halomonas
           elongata DSM 2581]
          Length = 473

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 4/194 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSI 74
              L  YVH PFC   C YC  N  +         ++   + E++    L    R ++ +
Sbjct: 65  PKPLSAYVHIPFCKSLCYYCACNKIITHNTQRAAEYLGWLIREIEVQGALFDDERRMTQL 124

Query: 75  FFGGGTPSLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             GGGTP+ +    +  +L  +  A ++      E +IE +P +V        R  G NR
Sbjct: 125 HLGGGTPTYLSHAQLVALLTALDNAFHFAPEGEREFSIEVDPRTVTPEQVSALRGLGFNR 184

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ  + +  R + R     +  A +  AR   F  +S DLIY LP+QT + ++  L
Sbjct: 185 LSLGVQDFDIEVQRAVNRVQGEEQVAALMAAAREAGFDSLSVDLIYGLPRQTRSSFDATL 244

Query: 192 QRALSYAVDHLSLY 205
            + ++   D ++ Y
Sbjct: 245 AKLIALRPDRIAAY 258


>gi|124002479|ref|ZP_01687332.1| oxygen-independent coproporphyrinogen III oxidase [Microscilla
           marina ATCC 23134]
 gi|123992308|gb|EAY31676.1| oxygen-independent coproporphyrinogen III oxidase [Microscilla
           marina ATCC 23134]
          Length = 454

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 20/198 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFF 76
           + +Y+H PFC   C +C  N  + +    +  ++++ L E Q  + L  T PR I  +  
Sbjct: 52  ISLYIHLPFCESLCTFCGCNKRITKNHQVERPYLETVLKEWQMYKDLFDTPPR-IKEMHL 110

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+P+    QN+  +++GI  +  +      + E NP++    + Q     G  R+S G
Sbjct: 111 GGGSPTFFSAQNLGWLIEGILADTELDDTPLFSFEGNPNNTTKEHLQVLYNLGFRRVSYG 170

Query: 137 VQSLEEQSLRFLGR---------NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           +Q  +    + + R          H  S+A+         +  ++ DL+Y LP QT+   
Sbjct: 171 IQDYDLNVQKAIRRIQPYEQVQLTHEQSKAVG--------YTSINHDLVYGLPLQTLESV 222

Query: 188 EMELQRALSYAVDHLSLY 205
              +++  + A D ++ Y
Sbjct: 223 LDTIRKTEALAPDRIAFY 240


>gi|325830289|ref|ZP_08163746.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|325487756|gb|EGC90194.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 410

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 20/284 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N L V + +P+C ++C YCD  + V   +V   E +  + + E++        R ++S+ 
Sbjct: 2   NELHVDLSFPYCPRRCDYCD--ALVATGRVADFERYADALVRELRAAAPEARGRIVTSVR 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GG+P L+ P+ +  ++D +   + V+ + +  ++A  + +  +    YRKAG+  + L
Sbjct: 60  FSGGSPVLMPPKALTRVMDELRNTFEVAPDADAALQATCAGLSFDALGHYRKAGITFLEL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD-----LIYALPKQTMTQWEME 190
           G ++ +      LG  +  +  I     AR +    S+D     L+Y LP Q        
Sbjct: 120 GQETFDGVQHDALGLCYPMNSYID----ARQLLTFCSWDGLGMSLLYGLPGQNRVNLSTS 175

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  A+ +    ++L  L +  G+     Y  H +    LP +    D   L         
Sbjct: 176 IVNAVGFGAREIALAPLRLRPGSALHERYAEHPERFDALPRKAWPTDDERLALRAAGEEQ 235

Query: 248 LHA---YEISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRV 286
           L A     ++ H F    +L      R  D   +G+G GA S++
Sbjct: 236 LVADGFTRVTQHLFSADGTLRASQRARCDDVDRLGVGVGAWSKL 279


>gi|261839508|gb|ACX99273.1| coproporphyrinogen III oxidase [Helicobacter pylori 52]
          Length = 457

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S +VE++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDVEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|317010885|gb|ADU84632.1| coproporphyrinogen III oxidase [Helicobacter pylori SouthAfrica7]
          Length = 457

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C +C  +      +  +  +I     E+  ++  +   R ++   +G
Sbjct: 53  LSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKNAMDTNREVAQFHYG 112

Query: 78  GGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+   P  +  I   I + +   S ++E++ E +P      + Q     G NR+S G
Sbjct: 113 GGTPTFFSPAQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHMQTLFDRGFNRLSFG 172

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  + +  + + R         A+ LAR+     ++FDLIY LP QT   +   L+  L
Sbjct: 173 VQDFDFEVQKAIHRIQPFEMVQDAVKLARDYGIKSINFDLIYGLPNQTKESFLKTLEWVL 232

Query: 196 SYAVDHLSLY 205
               D L+++
Sbjct: 233 KLDPDRLAVF 242


>gi|312135678|ref|YP_004003016.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775729|gb|ADQ05216.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 471

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 11/244 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSIS 72
           +S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++  + +       I 
Sbjct: 154 SSACLYIGIPICPTKCLYCSFSCHEMTRQVKSLIGMYTDSLICELEKTYHKIEENKNKIV 213

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKA 128
           +I+FGGG+P+ +   NI  I   + KN  +    EIT EA  P +++   +      +K 
Sbjct: 214 AIYFGGGSPATLGIDNIKRIFVNLFKNLKIEHIQEITFEAGRPDTIDEKLLKCLSEIKKD 273

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
              RI +  Q+  + +L+ +GRNH   +   A   A    F  ++ D+I  LP +    +
Sbjct: 274 FNLRICINPQTSNDNTLKIIGRNHTFEDIKRAFEQANEYGFKNINSDVILGLPGEDENDY 333

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  ++  L  +   ++++ L+I++ +L     K  +     E    +L + TQ I   HG
Sbjct: 334 KNTIEDILKLSPASITIHTLSIKRASLL--RFKWNEYEFMDEETVNNLLDWTQFILEEHG 391

Query: 248 LHAY 251
              Y
Sbjct: 392 YIPY 395


>gi|271964726|ref|YP_003338922.1| coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
 gi|270507901|gb|ACZ86179.1| Coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
          Length = 486

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 12/219 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----LT 66
           +G+   SL +Y+H PFC  +C +C+  +         E  + ++L  ++   +     L 
Sbjct: 67  SGEPLGSLFLYLHIPFCEMRCGFCNLFTRT----GAPEELVAAYLDALERQAEAVRDALE 122

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGY 125
            PR +++   GGGTP+ +    +  + D   +        V +++E +P++   +     
Sbjct: 123 EPRFVTAAI-GGGTPTYLSAAELTRMFDLTERIMGADLRAVPLSVETSPATATADRLAVL 181

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + G  RIS+GVQS  +   R   R     E   A+ H+    F  ++ DLIY +  QT 
Sbjct: 182 AERGTTRISIGVQSFVDAEARAAIRPQKRQEVETALGHIRETGFEVLNIDLIYGIDGQTE 241

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             W   L  AL++  + + LY L +   T   +  +D D
Sbjct: 242 RSWRHSLDAALAWKPEEIYLYPLYVRPLTGLGRRARDWD 280


>gi|317009319|gb|ADU79899.1| coproporphyrinogen III oxidase [Helicobacter pylori India7]
          Length = 457

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  AAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKS 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S +VE++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPLQLDEITQSIQEVFPNFSQDVEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLEWVLKLDPDRLAVF 242


>gi|16125660|ref|NP_420224.1| coproporphyrinogen III oxidase [Caulobacter crescentus CB15]
 gi|221234414|ref|YP_002516850.1| coproporphyrinogen III oxidase [Caulobacter crescentus NA1000]
 gi|13422772|gb|AAK23392.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           crescentus CB15]
 gi|220963586|gb|ACL94942.1| oxygen-independent coproporphyrinogen-III oxidase hemN [Caulobacter
           crescentus NA1000]
          Length = 454

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           + L VYVH PFC + C YC  ++ +         +      E+    R+L     ++ + 
Sbjct: 50  DHLSVYVHVPFCRRLCWYCGCHTSIAHTYERVGTYADVLAREIDLTARRLGEHDGLAHLH 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+ + P +   ++  +   + V    EI  E +P  +         +AGV R+SL
Sbjct: 110 FGGGSPNALSPSDFKRLVAQLKTAFRVRPGAEIAAELDPGMLSDTFVDATGEAGVTRVSL 169

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +      + R     +  AA+   R +    ++FDL+Y LP QT+       + A
Sbjct: 170 GVQTFDPTVQALVNRVQPFEQVAAAVERLRAVGVGGLNFDLMYGLPGQTVENVYASAKTA 229

Query: 195 LSYAVDHLSLY 205
           ++   D ++++
Sbjct: 230 VALRPDRIAVF 240


>gi|332528535|ref|ZP_08404523.1| coproporphyrinogen III oxidase [Hylemonella gracilis ATCC 19624]
 gi|332042046|gb|EGI78384.1| coproporphyrinogen III oxidase [Hylemonella gracilis ATCC 19624]
          Length = 482

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 127/304 (41%), Gaps = 25/304 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-------I 71
           L +YVH PFC   C YC  N  + ++      +++    E+    +  G  +       I
Sbjct: 67  LSLYVHVPFCESLCYYCACNKIITKHHERATEYLRYLAREVDLHLEALGATAASGHAPAI 126

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S +  GGGTP+ +  + +  ++  + + +  +   E +IE +P +++        + G N
Sbjct: 127 SQLHLGGGTPTFLNDEELRSLMRMLQRAFHFTPGGEYSIEVDPRTIDPARLDVLAELGFN 186

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ  +    + + R   A +    +  AR   F  ++ DLIY LP QT   +   
Sbjct: 187 RLSFGVQDFDPAVQKAVHRVQPARQVFDLVAAARERGFESINIDLIYGLPLQTPESFART 246

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL-H 249
           L +      D ++LY           +   DG   LP    A  L  L+ ++    GL +
Sbjct: 247 LDQVGELRPDRIALYAYAHLPERFKPQRRIDG-AQLP--GAAAKLAMLSDALARLQGLGY 303

Query: 250 AYEISNHSFLGAESLH--------NLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
            Y   +H  L  ++L         + N+  Y      D IG+G  A  R+     + A +
Sbjct: 304 VYVGMDHFALPGDALAVAQRQGRLHRNFQGYSTQPDCDLIGLGVSAIGRIGATYSQNAKT 363

Query: 297 IEKH 300
           +E++
Sbjct: 364 LEEY 367


>gi|126462724|ref|YP_001043838.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17029]
 gi|332558763|ref|ZP_08413085.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
 gi|126104388|gb|ABN77066.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17029]
 gi|332276475|gb|EGJ21790.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
          Length = 452

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + VYVH PFC + C +C   +   +     E ++ + L E++ ++Q L        + +G
Sbjct: 51  ISVYVHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKQHLPAGVKAGRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G+
Sbjct: 111 GGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIGI 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     +GR        A +  L R     ++ DL+Y LP Q        + + LS
Sbjct: 171 QDFTDIVQNAIGREQPFENTKACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVLS 230

Query: 197 YAVDHLSLY 205
              D ++++
Sbjct: 231 LRPDRVAIF 239


>gi|77463890|ref|YP_353394.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides 2.4.1]
 gi|85700421|sp|P33770|HEMF_RHOS4 RecName: Full=Coproporphyrinogen-III oxidase, anaerobic 1;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|77388308|gb|ABA79493.1| Coproporphyrinogen III oxidase, oxygen-independent (HemN)
           [Rhodobacter sphaeroides 2.4.1]
          Length = 452

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + VYVH PFC + C +C   +   +     E ++ + L E++ ++Q L        + +G
Sbjct: 51  ISVYVHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKQHLPAGVKAGRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G+
Sbjct: 111 GGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIGI 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     +GR        A +  L R     ++ DL+Y LP Q        + + LS
Sbjct: 171 QDFTDIVQNAIGREQPFENTKACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVLS 230

Query: 197 YAVDHLSLY 205
              D ++++
Sbjct: 231 LRPDRVAIF 239


>gi|317181978|dbj|BAJ59762.1| coproporphyrinogen III oxidase [Helicobacter pylori F57]
          Length = 457

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|170749675|ref|YP_001755935.1| coproporphyrinogen III oxidase [Methylobacterium radiotolerans JCM
           2831]
 gi|170656197|gb|ACB25252.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 448

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ + ++      ++ +   E   + R L     +  + FGGG
Sbjct: 50  LYLHVPFCRSMCWYCGCHTTITQHDAPIAAYLATLQAETVLVARHLDRAPRVRHVHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++ P     ++  +  ++ V+S+ EI +E +P ++     +    AGV+R SLGVQS
Sbjct: 110 TPTIVTPDAFRELVALLRDHFPVASDAEIAVEIDPRTLTPAMTRALGAAGVSRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +      + R  + +E  AA+   R      ++ DLIY LP Q++      ++++L   
Sbjct: 170 FDPVVQDAIRRRQSFAETAAAVAGLRAAGVDGINLDLIYGLPHQSVASCVETVRQSLRLR 229

Query: 199 VDHLSLY 205
            D L+++
Sbjct: 230 PDRLAVF 236


>gi|42524808|ref|NP_970188.1| coproporphyrinogen III oxidase [Bdellovibrio bacteriovorus HD100]
 gi|39577018|emb|CAE78247.1| oxygen-independent coproporphyrinogen III oxidase [Bdellovibrio
           bacteriovorus HD100]
          Length = 449

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 8/235 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTG--PRS 70
           +G+    +Y+H PFC   C +C  N+ + +    +  ++   L E Q ++ Q+     + 
Sbjct: 44  EGTGGWSLYLHIPFCESLCTFCGCNNIITKDHKRETPYVDMVLKEWQLYLDQVPELLEKP 103

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAG 129
           +  I  GGGTP+ +  + +  +L  I     + + + E +IE +P        +  R+ G
Sbjct: 104 LKHIHLGGGTPTFLSAEALTQLLKPILSRVKIDTHDFEGSIEVDPRRTNAAQLKALRELG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S+GVQ    +  R + R             AR++ +  ++FDLIY L +QT     
Sbjct: 164 FNRVSMGVQDFHPEVQRLVNRIQPLEITQKLTQDARDMGYTSVNFDLIYGLARQTPESIT 223

Query: 189 MELQRALSYAVDHLSLYQLTIEKG-TLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              +  ++   D ++LY   +        ++ KD D  LP  +    LY + + I
Sbjct: 224 ETAKATVALRPDRIALYSFALVPWIKPAQRLFKDED--LPKASEKRRLYEIARGI 276


>gi|269124145|ref|YP_003306722.1| Coproporphyrinogen dehydrogenase [Streptobacillus moniliformis DSM
           12112]
 gi|268315471|gb|ACZ01845.1| Coproporphyrinogen dehydrogenase [Streptobacillus moniliformis DSM
           12112]
          Length = 457

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L   +N++      ++G+Y+   FC  KC YC F +++++ K  ++ + + FLT ++ ++
Sbjct: 124 LEVVKNSIDFLDDKTIGIYIGLAFCPTKCTYCSFPAYLKKGKY-EKRYDEYFLTLLREIK 182

Query: 64  QLTGPRS-----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
           ++    S     ++SI+ GGGTPS +    + ++L  I +N       E T EA    ++
Sbjct: 183 EIGNLCSELNLEVNSIYVGGGTPSYLTHDELEILLKTINENIETKFLKEYTFEAGRIDTI 242

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
           +       +   V RIS+  QS ++ +L+ + R HN  +       A+ +   ++ D I 
Sbjct: 243 DNLKLSMLKIYNVTRISINPQSFKDSTLKLVNRYHNLDKLNEVYTEAKKLSLDINMDFII 302

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            LP ++       L++   Y  ++++ + L ++K +   K
Sbjct: 303 GLPLESTEDVLNTLEQFRKYNPENVTFHYLAMKKASTLTK 342


>gi|188527486|ref|YP_001910173.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
 gi|188143726|gb|ACD48143.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
          Length = 457

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|308184453|ref|YP_003928586.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
 gi|308060373|gb|ADO02269.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
          Length = 457

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDLEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLESVLKLNPDRLAVF 242


>gi|167576803|ref|ZP_02369677.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           TXDOH]
          Length = 490

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 16/206 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDF----------NSHVRRYKVGQENFIQSFLTEMQWM 62
           GQG  +  +Y H+P C   C +C++          ++ + R+    +  I+      Q +
Sbjct: 61  GQGKPA-HLYYHFPLCEYICHFCNYVKQLASPTSRDAQLDRWT---DALIKESTLYAQQV 116

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNN 121
             +TG   I S + GGGT +++ P ++  ILD +   + V+   E+ IE NP +  +++ 
Sbjct: 117 PWITG-ALIESFYIGGGTAAVLTPAHLKRILDHVRSTFHVTPECELNIEGNPDNFCDIDK 175

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
            +     G NR S+GVQS   +  +F  R H    +  AI   R+     + D+++ LP 
Sbjct: 176 VRALSDIGFNRFSVGVQSFTPEVNQFTNRGHTPDMSRQAILNLRSTGLPFNVDMMFGLPH 235

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQL 207
           QT      +L+  +   V  +++Y+L
Sbjct: 236 QTPETVSEDLRTLVELRVPTITIYRL 261


>gi|307637355|gb|ADN79805.1| Coproporphyrinogen III oxidase [Helicobacter pylori 908]
 gi|325995947|gb|ADZ51352.1| coproporphyrinogen III oxidase [Helicobacter pylori 2018]
 gi|325997541|gb|ADZ49749.1| Oxygen independent coproporphyrinogen III oxidase [Helicobacter
           pylori 2017]
          Length = 457

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVF 242


>gi|298291150|ref|YP_003693089.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
 gi|296927661|gb|ADH88470.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
          Length = 454

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 1/189 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +Y+H PFC   C YC   +           +  S   E+    +  GP  +S I +G
Sbjct: 53  AISLYLHVPFCRTICNYCGCTTKAALRDDPVRAYAASIHDEIALFAERLGPVEVSHIHWG 112

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P     ++  +   +    ++E  IE +P  V     +     G+NR SLGV
Sbjct: 113 GGTPNILPPDCFEALVRDLGNRFRFRPDMEHAIELDPRHVTAEGARRLADLGINRASLGV 172

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+L+    + + R        A+  HL       ++ DL+Y LP QT+       +R L+
Sbjct: 173 QTLDAAVQKAIARIQPLPVVEASFAHLRNAGITAINADLMYGLPLQTLDTIRDTAERVLA 232

Query: 197 YAVDHLSLY 205
                 +++
Sbjct: 233 LEPSRFAIF 241


>gi|254779348|ref|YP_003057453.1| coproporphyrinogen III oxidase [Helicobacter pylori B38]
 gi|254001259|emb|CAX29236.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Helicobacter
           pylori B38]
          Length = 457

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S +VE++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSKDVEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKEGFLKTLELVLKLDPDRLAVF 242


>gi|326334446|ref|ZP_08200658.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sp. oral taxon 338 str. F0234]
 gi|325693413|gb|EGD35340.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sp. oral taxon 338 str. F0234]
          Length = 454

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS 73
            S  + +Y+H PFC   C +C  + H+ +    +  +I++ L E Q ++    G   +  
Sbjct: 48  ASQGISLYIHLPFCESLCTFCGCHKHITKRHEMEAPYIENILKEWQLYLNTFPGKPLVKE 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+    +++  +++ I +  T +S+ + + E +P++    + +   + G  R+
Sbjct: 108 IHLGGGTPTFFSAEHLQYLIEKIFEKATRTSDFQFSFEGHPNNTTYQHLETLYRLGFTRV 167

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ       R + R             AR + +  +S DLI+ LP Q  T     ++
Sbjct: 168 SYGVQDYSPIVQRAIHRIQPFENVERVTLQARALGYTSISHDLIFGLPFQEETDVRHTIE 227

Query: 193 RALSYAVDHLSLY 205
                  D +S Y
Sbjct: 228 CTNRLRPDRISFY 240


>gi|294816241|ref|ZP_06774884.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444571|ref|ZP_08219305.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328840|gb|EFG10483.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 468

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 7/236 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISS 73
           ++L +Y+H PFC  +C +C+  + V         ++ +   + + +R+  G       ++
Sbjct: 64  DALSLYLHIPFCEVRCGFCNLFTRVGAPDGLTGAYLDALARQAKAVRRALGDGRRVQFAT 123

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             FGGGTP+ +    +  + D   ++       V +++EA+P++   +      + G  R
Sbjct: 124 AAFGGGTPTFLTAGELTRLCDIAEQDMGADLRAVPLSVEASPATATADRLAVLAERGATR 183

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQS  +   R   R    ++   A   +     P ++ DLIY +  QT   W   L
Sbjct: 184 LSLGVQSFVDAEARAAVRPQRRADVEAALARVRAARIPVLNIDLIYGIEGQTERSWRQSL 243

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             AL++  + L LY L +   T   +     D    ++   + LY   +    AHG
Sbjct: 244 DAALAWRPEELYLYPLYVRPLTGLGRQGTGADPAWDAQR--LRLYRFGRDHLRAHG 297


>gi|257065452|ref|YP_003145124.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
 gi|256793105|gb|ACV23775.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
          Length = 461

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 17/193 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT---EMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC + CPYC FN    R+   +E  ++ F     E+  +++L       S++ G
Sbjct: 31  LYMHVPFCERLCPYCSFN----RFPHSEERTVRYFKNLRRELMMVKELG--YDFDSLYIG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++  +    + D I    +  S  E++ E NP+ +     +  R   V+R+S+GV
Sbjct: 85  GGTPTIMMDE----LCDTIDLARSEFSIQEVSCETNPNHLTPLYLEQLR-GRVDRMSVGV 139

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS +   L+ + R     +  EA+  I +A   F  ++ D+IY  P QT      +L+  
Sbjct: 140 QSFDNDLLKQMDRFEKYGSGEEALERIKVAVPYFKSLNVDMIYNFPAQTEKSLRRDLEMI 199

Query: 195 LSYAVDHLSLYQL 207
           L       + Y L
Sbjct: 200 LESGTSQTTFYPL 212


>gi|259418972|ref|ZP_05742889.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
 gi|259345194|gb|EEW57048.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
          Length = 462

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIF 75
           + + VY+H PFC + C +C   +   +     E++I +   E+  ++Q L     +  + 
Sbjct: 60  DPVSVYLHIPFCERLCWFCACRTQGTKTLGPVESYITTLEQELALLKQILPAGLRMGRMH 119

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+++ P+ I  +   +      + + E ++E +P+ V+        + G+NR SL
Sbjct: 120 WGGGTPTILPPELIHRLARAVKAVIPPTGDWEFSVEIDPTMVDRQKIAALAEEGMNRASL 179

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  + +    +GR          +   R      ++ DL+Y LP Q +T+    + + 
Sbjct: 180 GIQDFDPKVQDAIGRLQPFDVTQQCVEDLRAAGIQSLNADLVYGLPHQDITRLNDTVSKV 239

Query: 195 LSYAVDHLSLY 205
           L  A D ++L+
Sbjct: 240 LDLAPDRIALF 250


>gi|320536614|ref|ZP_08036634.1| hypothetical protein HMPREF9554_01365 [Treponema phagedenis F0421]
 gi|320146542|gb|EFW38138.1| hypothetical protein HMPREF9554_01365 [Treponema phagedenis F0421]
          Length = 359

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 94/162 (58%), Gaps = 13/162 (8%)

Query: 49  ENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           E++I+S L E+ ++ +Q T  + ++S++FGGGTP+L     I  I+  + K + ++    
Sbjct: 8   ESYIESLLQEIHYVGKQSTEKKEVTSLYFGGGTPAL-AANRIKDIIKALEKYFIITDG-- 64

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + IE +P +V ++  Q  + +G+ +IS+G+QS + +    LGR     EAI A+ +A+ +
Sbjct: 65  MGIELHPENVTISTLQTLKDSGITKISIGIQSFQTKYQSMLGR-----EAINAVAMAQAL 119

Query: 168 ----FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               F  +S D I+ALP QT    + ++  A +   +H+++Y
Sbjct: 120 AAVPFETVSMDFIFALPLQTYDDLKNDIDTAFANGANHVAIY 161


>gi|126739818|ref|ZP_01755509.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
 gi|126719050|gb|EBA15761.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
          Length = 451

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 4/193 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SS 73
           S  + VY+H PFC + C +C   +   +     E +I +   E+  + ++  P+ +    
Sbjct: 48  SVPVSVYIHIPFCERLCWFCACRTQGTQSLSPVEAYIGTLEQELAHVSRII-PQGLRMGR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+++ P  I  +   I   +T + + E ++E +P+ V+ +        G++R 
Sbjct: 107 LHWGGGTPTILPPDLIHRLAKAIKTVFTPTDDWEFSVEIDPTLVDRDKISALAAEGMSRA 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q  +      +GR+         +   R      ++ DL+Y LP QT  + +  L+
Sbjct: 167 SIGIQDFDPLVQDAIGRSQPYDVTKTCVEDLRAAGITSLNADLVYGLPHQTQARMQDTLE 226

Query: 193 RALSYAVDHLSLY 205
           + LS + D ++L+
Sbjct: 227 KVLSLSPDRIALF 239


>gi|254513774|ref|ZP_05125835.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
 gi|219676017|gb|EED32382.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
          Length = 456

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 99/216 (45%), Gaps = 4/216 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y++A E+        SL +Y+H PFC  +C  CD  + V       + ++ +   E+Q 
Sbjct: 49  DYVAALEDEKRNV-DESLSMYIHLPFCPSRCLTCDHQTSVSHDHKQIDRYLDTLDLEIQL 107

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R +  +  GGGTP+ +    +  ++D + K + + +  E +++AN     ++
Sbjct: 108 VTDHLGRGRHLQQLHLGGGTPNYLSEVQLVRLVDMLDKYFKIDAQTESSLDANAQRASMS 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G   ++L ++ L+    + LGR+ +          AR + F  +S DL+Y L
Sbjct: 168 QLSLLHGLGFRTLNLELRDLDPTVQQALGRHQSVPVIRDVFENARQVGFDTVSTDLVYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           P Q++   +  L   L+ + D +S +  +  +  LF
Sbjct: 228 PMQSVASVQRTLNELLALSPDRISCFTYS-RRANLF 262


>gi|332186253|ref|ZP_08387998.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           S17]
 gi|332013621|gb|EGI55681.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           S17]
          Length = 445

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 16/197 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +YVH P+C + C YC  N+         ++++++ L E+  +  L   R ISS+ F
Sbjct: 45  TPVSLYVHVPYCREICWYCGCNTGAVGRAQRLDDYVEALLAEIATVAALLDGR-ISSVHF 103

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+P+++ P  +  I D I   + V+   E  IE +P      +       G+ R+S+G
Sbjct: 104 GGGSPNVLSPIQLLRIADAIRDQFGVAEPAEWAIEIDPRGFGAEHAAALATIGITRVSIG 163

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--------SFDLIYALPKQTMTQWE 188
            Q+      R + R       I    L  ++  R+        + DL+Y LP Q+     
Sbjct: 164 AQTFAAPIQRAINR-------IQPYDLVADVVDRLRLVGISYINLDLMYGLPHQSRADVA 216

Query: 189 MELQRALSYAVDHLSLY 205
             +  AL+     ++++
Sbjct: 217 ASIASALTLRPSRIAMF 233


>gi|289524519|ref|ZP_06441373.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289502241|gb|EFD23405.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 228

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 13/189 (6%)

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           ++AIAA+ +A  +   +S DLI+ LP QT+  W   L+  L++ + HLS+Y+LT+E+GT 
Sbjct: 1   ADAIAAL-VASGL--DVSVDLIFGLPGQTIQSWHRTLKDCLNFGIRHLSIYELTLEEGTP 57

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD 274
           +      G+           LY   Q          YEI++ S       HN+ YW+  +
Sbjct: 58  W------GECPPSGLTEGYPLYRFAQWYLPKKRFIQYEIASFSLPRHWCRHNIAYWQGEN 111

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG 334
           ++G+GPGA   +    +     I  +       +      V  +E L  ++QA E  ++ 
Sbjct: 112 FLGVGPGAWGYLDGFRYGNTREINDY----FDQITSENLPVEYQEILPQDKQATEAAILA 167

Query: 335 LRLREGISV 343
           LR R G++ 
Sbjct: 168 LRTRWGVTA 176


>gi|108563075|ref|YP_627391.1| coproporphyrinogen III oxidase [Helicobacter pylori HPAG1]
 gi|107836848|gb|ABF84717.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori HPAG1]
          Length = 457

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLEWVLKLNPDRLAVF 242


>gi|75910590|ref|YP_324886.1| coproporphyrinogen III oxidase [Anabaena variabilis ATCC 29413]
 gi|75704315|gb|ABA23991.1| coproporphyrinogen III oxidase, anaerobic [Anabaena variabilis ATCC
           29413]
          Length = 472

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 3/231 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFG 77
           + +Y H PFC   C +C  N+ + + K   E ++      ++ +  LT   R++  + +G
Sbjct: 64  ISLYCHIPFCESACYFCGCNTVITQKKSIVEPYLNYLNRNIRQVANLTNNQRTVQQLHWG 123

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  +   +   +    N EI+IE NP  +        R  G NRIS G+
Sbjct: 124 GGTPNYLSLPQVESLWQTLNDCFRFDENAEISIEVNPRFLTREYLFFLRDLGFNRISFGI 183

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q    Q  + + R          +   R+  F  ++ DLIY LP QT+  ++  + + + 
Sbjct: 184 QDFNFQVQQAVNRIQPEEMLFQVMDWMRDAGFASVNVDLIYGLPYQTLETFKSTVDKTIQ 243

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D ++++        L    H      LPS    +D+  +T    ++HG
Sbjct: 244 LNPDRIAVFNFAYVPW-LKPVQHLIPPAALPSSPEKLDILQMTIEKLTSHG 293


>gi|312883716|ref|ZP_07743438.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368620|gb|EFP96150.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 381

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 16/258 (6%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           R+    + ++ +   E++    L   R ++ + FGGGTP+ +    I+ ++  +   +  
Sbjct: 1   RHSHKADEYLDALELEVRTRAALLQGRKVNQLHFGGGTPTFLSQAQISRLMSVLRHEFDF 60

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
             + E++IE +P  + +      R+ G NR+S+GVQ   +   + + R  + +   A + 
Sbjct: 61  DLDAELSIEIDPRDLPIAKIDHLRREGFNRLSIGVQDFNKDVQKAVNREQDEAHITALVK 120

Query: 163 LARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            A ++ F   + DLIY LPKQ+   +   +++ L    + +S++        LF    K 
Sbjct: 121 RAEDLNFRSTNLDLIYGLPKQSADSFAQTVKKVLEMKPERISVFNYA-HMPELFAAQRKI 179

Query: 222 GDLVLPS--ENVAV---DLYNLTQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRYG 273
               LPS  + +A+    L  LTQ    A G+  + + N     A+    LH  N+  Y 
Sbjct: 180 HQQDLPSIEQKMAMLQDTLITLTQRGYQAIGMDHFALPNDELAIAQRQGKLHR-NFQGYT 238

Query: 274 -----DYIGIGPGAHSRV 286
                D IG G  A S +
Sbjct: 239 TQGECDLIGFGVSAISMI 256


>gi|260463626|ref|ZP_05811824.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259030480|gb|EEW31758.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 449

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/344 (20%), Positives = 146/344 (42%), Gaps = 21/344 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIF 75
           + + +Y+H P+C K C +C  ++   R+      +++S   E+  +  L  G   + ++ 
Sbjct: 45  DEISLYLHIPYCDKLCWFCACHTKQTRHYEPVTKYLRSLHAEIATVSSLAEGKGRVRAVH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P++++PQ++  +   +  +++     +I++E  P+ ++        + G+ R SL
Sbjct: 105 FGGGSPTMLKPQDMVALGAVLRNSFSFLPGAKISVEIEPNDMDEARLDALAEIGMTRASL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +  + + R     +    +   R+     ++ DL+Y LP QT       + +A
Sbjct: 165 GVQDFDPKVQKAINREQTFLQTKTVVDGVRSRGVESVNLDLLYGLPHQTGESVLSTVMQA 224

Query: 195 LSYAVDHLSLY-----------QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           L+   D ++L+           Q  I++  L     +     L +  +    Y       
Sbjct: 225 LTLEPDRIALFGYAHVPWFKKHQTMIDEAWLPGPEERFAQSQLAARAILDQGYEAIGLDH 284

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A    A  ++ H+ +   +       R    IG+GP + S+ + G       ++  P +
Sbjct: 285 FAKPGDALALAAHAGMLRRNFQGYTEDRCETLIGLGPSSISQFRQG------YVQNMPST 338

Query: 304 --WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
             + +MV   G A V     S + +A  +++  L    G S  D
Sbjct: 339 AEYGRMVDDGGLASVRGIAFSDDDRARGWIIERLMCDSGFSAID 382


>gi|312792970|ref|YP_004025893.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180110|gb|ADQ40280.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 471

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 11/245 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSI 71
           S+S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++  + +       I
Sbjct: 153 SSSACLYIGIPICPTKCLYCSFSCHEITRQVKSLIGMYTDSLICELEKTYQKIEENKNRI 212

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +I+FGGG+P+++  +NI  I   + +N       EIT EA  P +++    Q   +   
Sbjct: 213 VAIYFGGGSPAVLGIENIKKIFTNLFENLERKHIQEITFEAGRPDTIDEKLLQYLSEINQ 272

Query: 131 N---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQ 186
           +   R+ +  Q+  + +L+ +GRNH+  +   A   A +  F  ++ D+I  LP +    
Sbjct: 273 DLNVRLCINPQTSNDNTLKIIGRNHSFEDIKRAFAQAYKYSFKNINSDVILGLPGEDEND 332

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  +   L  +   ++++ L+I++ +L     K  +     E    +L + TQ I   H
Sbjct: 333 YKRTIDDVLKLSPASITVHTLSIKRASLL--RFKWNEYKFMDEETVNNLLDWTQYILEEH 390

Query: 247 GLHAY 251
           G   Y
Sbjct: 391 GYIPY 395


>gi|306821793|ref|ZP_07455388.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304550160|gb|EFM38156.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 477

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 104/215 (48%), Gaps = 5/215 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQ-- 60
           +S  +  +  +    + +Y+  PFC  +C YC F S  + + K   ++++++   E++  
Sbjct: 147 ISDIQEEIISRLDKKISLYISIPFCPSRCNYCSFFSMDINKGKKFVDDYLKNLEIEIRHT 206

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
              Q    + ISSI+ GGGTPS ++   +      I  N+ +    E T EA    +++ 
Sbjct: 207 LSMQYFKDKKISSIYVGGGTPSSLDYDELRRFFKIIKDNFNIDDIDEFTFEAGRVDTLDE 266

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +   +  V+RIS+  Q++ + +   +GRNHN+ +      LAR I F  ++ DLI  
Sbjct: 267 EKLRIIFQNKVSRISINPQTMNDITFGRIGRNHNSKDVREIFTLARQIGFDNINMDLIMG 326

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           L  +++      +   +    + ++++ L +++ +
Sbjct: 327 LTGESIDDMRYSVDEIVKLDPESITVHCLAVKRAS 361


>gi|254466534|ref|ZP_05079945.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacterales
           bacterium Y4I]
 gi|206687442|gb|EDZ47924.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacterales
           bacterium Y4I]
          Length = 451

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 4/190 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFF 76
           + VY+H PFC + C +C   +   +     E++I +   E+  +  L  P+ +    + +
Sbjct: 51  VSVYLHIPFCERLCWFCACRTQGTQTLSPVESYIGTLEQELHLVAPLL-PKGLRMGRMHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   +   +  + + E ++E +P+ V+ +      + G+NR S+G
Sbjct: 110 GGGTPTILPPHLIHRLAQAVKAVFPQTEDWEFSVEIDPTMVDRDKIAALAEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  +    + +GR        A +   R      ++ DL+Y LP QT  +    +++ L
Sbjct: 170 IQDFDPLVQQAIGRAQPFEVTKACVEDLRAAGINSLNADLVYGLPHQTQARMADTVEKVL 229

Query: 196 SYAVDHLSLY 205
           S   D L+L+
Sbjct: 230 SLGPDRLALF 239


>gi|4378844|gb|AAD19712.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 452

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 2/193 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC + C YC  ++ V R +     ++ + + E++ +  L      I  + +G
Sbjct: 56  ISIYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDTLVKEIETVGNLAPNHLKIGHLSWG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+I  + I  ++  + + +  + ++   +E +P  ++    Q     G+NR SLGV
Sbjct: 116 GGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELDPRLLDAEFAQNLFDIGINRTSLGV 175

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q       + +GR     +   AI   R     +++FDL+Y LP Q + +  +  Q   +
Sbjct: 176 QDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVNFDLLYGLPHQGLDEIRLNCQETCA 235

Query: 197 YAVDHLSLYQLTI 209
             +  L +  + I
Sbjct: 236 CRLTELPVLAMPI 248


>gi|91217726|ref|ZP_01254682.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
 gi|91184064|gb|EAS70451.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
          Length = 456

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           +  + +Y+H PFC   C +C     + +    +  +I++ L E+    ++ G    I  +
Sbjct: 51  AKHISLYIHLPFCESMCTFCGCTKRITKNHTLELPYIKALLKELSMYSEVLGDGLVIQQL 110

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+    +N+  +L GI K    +++ E + E +P++    + + +   G  R+ 
Sbjct: 111 HLGGGTPTFFSVENLEELLMGIFKIADKTADCEFSFEGHPNNTTKEHLEMFNHNGFTRVC 170

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   E   + + R         A   AR   F  +  D+I+ LP QT       +++
Sbjct: 171 YGVQDYNETVQKAINRIQPFEHVEQATKTAREAGFSSVGHDIIFGLPFQTQEHVLHTIKQ 230

Query: 194 ALSYAVDHLSLY 205
            ++   D ++ Y
Sbjct: 231 TIALMPDRIAFY 242


>gi|326387126|ref|ZP_08208736.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208307|gb|EGD59114.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 443

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 3/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S  + +Y+H P+C   C YC  N+           ++ +   E++ +  + GP+  ++ I
Sbjct: 49  SGDVSLYLHIPYCKDICWYCGCNTGAANRTHRLAAYLDALHEEIELVAGMLGPQVRVTRI 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+ I P +   ++D +  N+ V   V  +IE +P S+        R  GV + S
Sbjct: 109 AFGGGSPNAISPTDFVRLVDALLVNFRVIDPV-FSIELDPRSLTPAWLMAIRGIGVIKAS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+ + +    +GR          +  L +     ++FDL+Y LP Q        L +
Sbjct: 168 MGVQTFDPRVQEAIGRIQPRETIAQGVEGLRKAGVESINFDLMYGLPFQDDAILADTLDQ 227

Query: 194 ALSYAVDHLSLY 205
           A +   D ++L+
Sbjct: 228 ATAMGADRIALF 239


>gi|317012483|gb|ADU83091.1| coproporphyrinogen III oxidase [Helicobacter pylori Lithuania75]
          Length = 457

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEIFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDLEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLEWVLKLDPDRLAVF 242


>gi|15611677|ref|NP_223328.1| coproporphyrinogen III oxidase [Helicobacter pylori J99]
 gi|11386870|sp|Q9ZLH0|HEMN_HELPJ RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|4155149|gb|AAD06178.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE [Helicobacter
           pylori J99]
          Length = 457

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDLEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVF 242


>gi|317061972|ref|ZP_07926457.1| LOW QUALITY PROTEIN: oxygen-independent coproporphyrinogen III
           oxidase [Fusobacterium sp. D12]
 gi|313687648|gb|EFS24483.1| LOW QUALITY PROTEIN: oxygen-independent coproporphyrinogen III
           oxidase [Fusobacterium sp. D12]
          Length = 140

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 4/127 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISS 73
           S  LG+Y+H P+C K C +C+ N   ++     E + Q    ++++ RQ +  +S  +  
Sbjct: 13  SKQLGLYLHTPYCDKICSFCNMNR--KKVDTELEEYHQYLCQQIEYYRQFSFCQSSDLDV 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP++   + +  IL  + KN+  S++ E+T E    ++ V   +  ++  VNR+
Sbjct: 71  VFFGGGTPTIYSHRQLQNILQCLQKNFHFSTSYEMTFETTLHNLGVEKAKLLQENAVNRL 130

Query: 134 SLGVQSL 140
           S+G+Q+L
Sbjct: 131 SVGIQTL 137


>gi|310829078|ref|YP_003961435.1| hypothetical protein ELI_3513 [Eubacterium limosum KIST612]
 gi|308740812|gb|ADO38472.1| hypothetical protein ELI_3513 [Eubacterium limosum KIST612]
          Length = 481

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 98/205 (47%), Gaps = 11/205 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------S 70
             + VYV  P C+ KC YC F S V   K   +  +  +L  + +  +LTG        +
Sbjct: 155 KKVSVYVGIPLCIAKCSYCSFISTVADKK---QTIVSEYLENLLYEVRLTGRYLKEKGIA 211

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG 129
             +++ GGGTPS+++   +  +L  + +   +    E T EA  P +  +   +  +  G
Sbjct: 212 TDTLYIGGGTPSILDEGQLETLLTTLDEELDLQGLREYTFEAGRPETTNLRKLEILKAHG 271

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V+R+ L  Q++   +L  + RN+     +      R + F  ++ DLI  L +++   + 
Sbjct: 272 VDRVCLNPQTMNADTLAAVNRNYPPQAILDTYETIREVGFESVNMDLILGLNRESEKAFM 331

Query: 189 MELQRALSYAVDHLSLYQLTIEKGT 213
             L + ++   ++++++ L ++KG+
Sbjct: 332 RSLGQVIALGPENITIHCLAVKKGS 356


>gi|315638629|ref|ZP_07893803.1| radical SAM domain protein [Campylobacter upsaliensis JV21]
 gi|315481253|gb|EFU71883.1| radical SAM domain protein [Campylobacter upsaliensis JV21]
          Length = 444

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + + N+ QS   E+Q ++      + ++++ G
Sbjct: 41  SYMLYAHIPFCHTFCPYCSFHKYYYDENLAK-NYFQSLRKELQIIKD--KGFNFNAMYVG 97

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++      + K  ++R+S G+
Sbjct: 98  GGT-TLINEEELLRTLELCKKLFDIK---EISCESDPNHIDPKKLTMF-KGLIDRLSCGI 152

Query: 138 QSLEEQSLRFLGRNHN--ASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R H   +SE +   I  A  I P  S DLI+ LP Q+  Q   +L  A
Sbjct: 153 QSFDDETLKKVARYHKFGSSEVLQEKIAKALGILPIFSIDLIFNLPTQSKEQLLNDLNIA 212

Query: 195 LSYAVDHLSLYQL 207
              +   ++ Y L
Sbjct: 213 KKLSPQQITTYPL 225


>gi|331270242|ref|YP_004396734.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum BKT015925]
 gi|329126792|gb|AEB76737.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum BKT015925]
          Length = 397

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 23/301 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N  G+Y+H PFC   C +C +N      ++  + + ++ ++E++   +  G ++I+S++F
Sbjct: 15  NEFGIYIHIPFCTTLCSFCPYNKEKYNEQLASK-YKEALISEIEMAGKSHGRKNITSVYF 73

Query: 77  GGGTPSLI--EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+L+  + ++I  IL         + N  I IE +P  ++       +  G + IS
Sbjct: 74  GGGTPALMLEDLEDIISILKK-----NFNLNNNIGIELHPRDIDKYCLTKLKNIGFDMIS 128

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  ++ L  LGR +   E    + ++   F  +  DLI+ +  Q+  +       A
Sbjct: 129 IGIQSFNKKCLESLGREYVYGEDKVKL-VSEAGFKVIDVDLIFGIKGQSREELREYFLAA 187

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                  +S Y          Y  +K+  L    +   +D  N     T ++ ++    S
Sbjct: 188 FKSGATQVSTYPFI----DFSYANNKNKPLGRKDKRELLDCIN-----TISNDIYCERTS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
             +F G +++   +      YIG GP A +  K        S+++    ++K V+ N  A
Sbjct: 239 VWTF-GKKNVSKYSSITRDLYIGFGPSAATLTKDVFKVNTFSVKE----YIKSVKDNEKA 293

Query: 315 V 315
            
Sbjct: 294 T 294


>gi|217032486|ref|ZP_03437978.1| hypothetical protein HPB128_156g16 [Helicobacter pylori B128]
 gi|298736363|ref|YP_003728889.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
 gi|216945832|gb|EEC24453.1| hypothetical protein HPB128_156g16 [Helicobacter pylori B128]
 gi|298355553|emb|CBI66425.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
          Length = 457

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLEWVLKLNPDRLAVF 242


>gi|254475110|ref|ZP_05088496.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
 gi|214029353|gb|EEB70188.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
          Length = 451

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFF 76
           + VY+H PFC + C +C   +   +     EN+I +   E+  + + T P  +    + +
Sbjct: 51  VSVYIHIPFCERLCWFCACRTQGTQTLNPVENYIATVEQELALLAE-TVPAGLRMGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   +    T + + E ++E +P+ V+ +        G+NR S+G
Sbjct: 110 GGGTPTILPPALIHRLAKAVKAAITPADDWEFSVEIDPTLVDRDKIAALSAEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  + +    +GR        A +   R    R ++ DL+Y LP Q   +    + + L
Sbjct: 170 IQDFDPEVQAAIGRTQPYEVTAACVADLRAAGIRSLNTDLVYGLPHQDAARIADTVDKVL 229

Query: 196 SYAVDHLSLY 205
           S   D ++L+
Sbjct: 230 SLRPDRVALF 239


>gi|260564161|ref|ZP_05834646.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|260151804|gb|EEW86897.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
          Length = 450

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|89893650|ref|YP_517137.1| hypothetical protein DSY0904 [Desulfitobacterium hafniense Y51]
 gi|89333098|dbj|BAE82693.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 384

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/383 (21%), Positives = 165/383 (43%), Gaps = 33/383 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISS 73
           +S+ V+V+ PFC+++      +SH+R    G+E    ++++   E+    +L   +++ S
Sbjct: 18  SSVTVFVNIPFCIRRRR--GESSHIR--PAGKETRNAYLEALEREIDHAGELLEGKTVQS 73

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGG  +++ P  +A +L    + + ++  +E+TI A P ++      G      NRI
Sbjct: 74  IYVGGGAATVLSPDKLARLLLRFKRAYQMAEYLELTIAAAPETLVSPCLSGLNMCNFNRI 133

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+      ++ L +LG ++  ++    +  L    +  ++ D++Y +P QT       L 
Sbjct: 134 SVEALCASDKMLDYLGTSYRLADLEDGLTMLGMFNYRNVNADVMYGIPGQTKAALRNSLV 193

Query: 193 RALSY-AVDHLSL--YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             L+  A+ H++L  ++L+ ++G               S   + D Y  +       G  
Sbjct: 194 TCLALPALSHITLRRFELSEQEGV--------------SAEESRDQYRYSLEYLKGKGFC 239

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            Y   + +  G ES H     +  D+IG G GA S V        I+       +LK   
Sbjct: 240 QYAAGHFAKKGYESRHFYYTSQGMDHIGFGVGAKSYVD----GYGITNTTDLAKYLKWAG 295

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQG 366
           +         +L  + +   F  + L+L EG S +++    G         +LQ   +Q 
Sbjct: 296 QYEEITENVLYLDEKARQKRFAALRLQLAEGFSEEEFAARFGEGAGAAMGPSLQLLLKQS 355

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
           FI  +   R   T+ G+  +D +
Sbjct: 356 FISCLD-GRYVPTEEGLFQIDEI 377


>gi|308061995|gb|ADO03883.1| coproporphyrinogen III oxidase [Helicobacter pylori Cuz20]
          Length = 457

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QILFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|332673512|gb|AEE70329.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 83]
          Length = 457

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|326554660|gb|ADZ89299.1| coproporphyrinogen III oxidase [Brucella melitensis M5-90]
          Length = 458

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 58  LYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 117

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 118 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 177

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 178 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 223


>gi|315586655|gb|ADU41036.1| coproporphyrinogen dehydrogenase [Helicobacter pylori 35A]
          Length = 457

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|225686939|ref|YP_002734911.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256042927|ref|ZP_05445873.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256261920|ref|ZP_05464452.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|265989360|ref|ZP_06101917.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|225643044|gb|ACO02957.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|263000029|gb|EEZ12719.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091400|gb|EEZ15936.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326411370|gb|ADZ68434.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
          Length = 450

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|17988440|ref|NP_541073.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|17984225|gb|AAL53337.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella
           melitensis bv. 1 str. 16M]
          Length = 474

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 74  LYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 133

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 134 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 193

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 194 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 239


>gi|57242724|ref|ZP_00370661.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
 gi|57016653|gb|EAL53437.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
          Length = 444

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + + N+ QS   E+Q ++      + ++++ G
Sbjct: 41  SYMLYAHIPFCHTFCPYCSFHKYYYDENLAK-NYFQSLRKELQIIKD--KGFNFNAMYVG 97

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++      + K  ++R+S G+
Sbjct: 98  GGT-TLINEEELLRTLELCKKLFDIK---EISCESDPNHIDPKKLTMF-KGLIDRLSCGI 152

Query: 138 QSLEEQSLRFLGRNHN--ASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R H   +SE +   I  A  I P  S DLI+ LP Q+  Q   +L  A
Sbjct: 153 QSFDDETLKKVARYHKFGSSEVLQEKIAKALGILPIFSIDLIFNLPTQSKEQLLNDLNIA 212

Query: 195 LSYAVDHLSLYQL 207
              +   ++ Y L
Sbjct: 213 KKLSPQQITTYPL 225


>gi|256112100|ref|ZP_05453036.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265993540|ref|ZP_06106097.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764410|gb|EEZ10442.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 450

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|317180450|dbj|BAJ58236.1| coproporphyrinogen III oxidase [Helicobacter pylori F32]
          Length = 457

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVF 242


>gi|89055735|ref|YP_511186.1| coproporphyrinogen III oxidase [Jannaschia sp. CCS1]
 gi|88865284|gb|ABD56161.1| oxygen-independent coproporphyrinogen III oxidase [Jannaschia sp.
           CCS1]
          Length = 480

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           ++ + +Y+H PFC + C YC  N  +        ++ Q+   E+      L G   +S +
Sbjct: 75  ADPISLYLHVPFCRQMCWYCGCNMKLAAKYAPVASYAQTLRKELALTADALPGRMVVSHL 134

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +   ++   +D +   +  +   EI IE++P ++  +        G  R S
Sbjct: 135 HWGGGTPTALSSDDLEAAMDAVRARFDFAPEAEIAIESDPRTLTADMAARIGAMGFTRAS 194

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + Q  + + R        A++   R    R ++FDLIY LP QT+      ++ 
Sbjct: 195 FGVQEFDPQVQKAINRVQPPEMVAASVTQLRAGGVRGINFDLIYGLPLQTVESLVETVKL 254

Query: 194 ALSYAVDHLSLY 205
             +   D ++L+
Sbjct: 255 CAAMRPDRVALF 266


>gi|86153807|ref|ZP_01072010.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842768|gb|EAQ59980.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 448

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 11/199 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T +   S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        
Sbjct: 36  TPKQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDF 92

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S++ GGGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  ++
Sbjct: 93  TSMYVGGGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIID 147

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q  
Sbjct: 148 RLSCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLL 207

Query: 189 MELQRALSYAVDHLSLYQL 207
            +L+ A + A   ++ Y L
Sbjct: 208 NDLEIAKNLAPQQITTYPL 226


>gi|86138531|ref|ZP_01057104.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
 gi|85824591|gb|EAQ44793.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
          Length = 451

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 4/190 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + VY+H PFC + C +C   +   +     E++I +   E+  + ++L     +  + +G
Sbjct: 51  VSVYIHIPFCERLCWFCACRTQGTQSLSPVESYIGTLEAELALLAKELPAGLKMGRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  I  +   +   +  + + E ++E +P+ V+ +        G+NR S+G+
Sbjct: 111 GGTPTILTPILIHRLARAVKNVFGQTPDWEFSVEIDPTLVDQDKIAALAAEGMNRASIGI 170

Query: 138 QSLEEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q  +      +GR   + A++A      A  I   ++ DL+Y LP QT  +    L + L
Sbjct: 171 QDFDPLVQEAIGRKQPYEATQACVEDLRAAGIT-SLNADLVYGLPHQTPARMADTLNKVL 229

Query: 196 SYAVDHLSLY 205
           S   D ++L+
Sbjct: 230 SLKPDRIALF 239


>gi|297250097|ref|ZP_06933798.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|297173966|gb|EFH33330.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 458

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 58  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 117

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 118 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 177

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 178 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 223


>gi|328887085|emb|CCA60324.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Streptomyces venezuelae
           ATCC 10712]
          Length = 515

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 150/334 (44%), Gaps = 31/334 (9%)

Query: 21  VYVHWPFCVKKCPYCD-FNSHVRRYK-VGQENFIQSFLTEMQW---MRQLTGPRSISSIF 75
           +Y H PFC   C +C  F     +Y+   Q+ F+Q+ + E++     +   G + I  + 
Sbjct: 72  LYFHIPFCEAFCNFCACFKESAAKYQGERQKRFVQAMVKEIERNARSKYFQGTK-IKYVQ 130

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGVNRIS 134
           FGGGTPS +E  ++A IL+ + + + +S    I++E +P  +  + + +  +  G+ RIS
Sbjct: 131 FGGGTPSALEQDSMAAILEAVHREFDLSEVDGISLEGSPLGLSKDGYIEMLKSLGITRIS 190

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNI----FPRMSFDLIYALPKQTMTQWEM 189
            GVQ+L+ +    + +       +  +H  A NI        + DL+Y LP Q       
Sbjct: 191 FGVQTLDPE----IRKKLTIKATVDQVHQTAENIRKAGIRTFALDLMYNLPGQDDEVLAK 246

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDL--VLPSENVAVDLYNLTQSITSAH 246
           +LQ   +      +  Y+    +GT   +  + G +  V PS  +  + Y   +   +A+
Sbjct: 247 DLQGICAELRPSFVQTYRFNQWEGTRLDQQIRAGKVADVKPSGAIEREQYRQIKDGLAAY 306

Query: 247 GLHA-------YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           G            + +   +G       N +R    +GIGP A + +   S+R    +E+
Sbjct: 307 GYDKQLLINFFTRLDDPGEIGLNHACGGNGYRASYTLGIGPAAENYMGERSYRNHTDVER 366

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
               W++ V + G   +E+  + SE + +  +M+
Sbjct: 367 ----WMREV-EAGIIPIEQGRICSEDEVENRVMV 395


>gi|86151482|ref|ZP_01069697.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315123925|ref|YP_004065929.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841829|gb|EAQ59076.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315017647|gb|ADT65740.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 448

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  +NR+S G+
Sbjct: 99  GGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDSNKLSMF-KGIINRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|218439556|ref|YP_002377885.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7424]
 gi|218172284|gb|ACK71017.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7424]
          Length = 469

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 7/201 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE----NFIQSFLTEMQWMRQLTGP 68
            Q  + L +Y H PFC   C +C  N  V + K        N+I   +  +  +  L   
Sbjct: 57  NQAHSPLSLYFHIPFCQSACYFCGCNVIVTQQKERAVDPYLNYISKNIENIASLIDLD-- 114

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + +GGGTP+ +    + ++   I +++   S+ EI+IE NP  V+ N     R  
Sbjct: 115 RRVGQLHWGGGTPNYLNQDQVEILWTKINQHFRFESDAEISIEINPRYVDRNYILFLRDL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    +    + R          +   R   F  ++ DLIY LP Q    +
Sbjct: 175 GFNRISFGIQDFNPKVQETINRVQPEEMLFNVMEWMREAGFESVNVDLIYGLPYQNHYTF 234

Query: 188 EMELQRALSYAVDHLSLYQLT 208
           +  +Q+ +    D ++++   
Sbjct: 235 KETIQKTIQLNPDRIAVFNFA 255


>gi|242310576|ref|ZP_04809731.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
 gi|239522974|gb|EEQ62840.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
          Length = 455

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 4/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            +Y N++    S  L +Y+H PFC   C +C  N      +  +  +++    E++ ++ 
Sbjct: 35  DSYINDLQNDTS-PLSLYIHLPFCRSACYFCGCNVIYTSKEENKTLYLKYLKKELEILKN 93

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            L   + +  + FGGGTP+    + + +++  +   +       EI  E +P        
Sbjct: 94  TLNCNKEVYQLHFGGGTPTFFNAKELEILITMLKNTFPNFDKEAEIACEIDPRFFTKEQM 153

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  +  G NR+S G+Q    +    + R        +AI  AR      ++FDLIY LP 
Sbjct: 154 EVLKNGGFNRLSFGIQDFNPKVQEAIHRIQPFELVESAISTAREYGITSINFDLIYGLPY 213

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT+  ++  L++ L+   D  +++
Sbjct: 214 QTLKSFQETLKQCLNLNPDRFAIF 237


>gi|62318012|ref|YP_223865.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|83269988|ref|YP_419279.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|189023264|ref|YP_001933005.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|254691555|ref|ZP_05154809.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254695149|ref|ZP_05156977.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|254698249|ref|ZP_05160077.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731692|ref|ZP_05190270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|256256741|ref|ZP_05462277.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260544199|ref|ZP_05820020.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260757180|ref|ZP_05869528.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260759451|ref|ZP_05871799.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260762695|ref|ZP_05875027.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882988|ref|ZP_05894602.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|261215505|ref|ZP_05929786.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|62198205|gb|AAX76504.1| HemN-2, oxygen-independent coproporphyrinogen III oxidase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940262|emb|CAJ13327.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator
           protein 3/MiaB/NifB:Radical SAM [Brucella melitensis
           biovar Abortus 2308]
 gi|189021838|gb|ACD74559.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus S19]
 gi|260097470|gb|EEW81344.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260669769|gb|EEX56709.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260673116|gb|EEX59937.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677288|gb|EEX64109.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260872516|gb|EEX79585.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260917112|gb|EEX83973.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
          Length = 450

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|210134872|ref|YP_002301311.1| coproporphyrinogen III oxidase [Helicobacter pylori P12]
 gi|210132840|gb|ACJ07831.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori P12]
          Length = 457

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYIGYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMNTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVF 242


>gi|208434587|ref|YP_002266253.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
 gi|208432516|gb|ACI27387.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
          Length = 457

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKESFLKTLEWVLKLDPDRLAVF 242


>gi|83718156|ref|YP_438500.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           E264]
 gi|167614971|ref|ZP_02383606.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           Bt4]
 gi|257141551|ref|ZP_05589813.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           E264]
 gi|83651981|gb|ABC36045.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           E264]
          Length = 490

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 21  VYVHWPFCVKKCPYCDF----------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +Y H+P C   C +C++          ++ + R+    +  I+      Q +  +TG   
Sbjct: 68  LYYHFPLCEYICHFCNYVKQLASPTSRDAQLDRWT---DALIKESTLYAQQVPWITG-AL 123

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNNFQGYRKAG 129
           I S + GGGT +++ P ++  ILD +   + V+   E+ IE NP +  +++  +     G
Sbjct: 124 IESFYIGGGTAAVLTPAHLLRILDHVRSTFHVTPECELNIEGNPDNFCDIDKVRALSDIG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S+GVQS   +  +F  R H    +  AI +L    FP  + D+++ LP QT     
Sbjct: 184 FNRFSVGVQSFTPEVNQFTNRGHTPDMSRQAILNLRSTGFP-FNVDMMFGLPHQTPETVS 242

Query: 189 MELQRALSYAVDHLSLYQL 207
            +L+  +   V  +++Y+L
Sbjct: 243 EDLRTLVELRVPTITIYRL 261


>gi|157414659|ref|YP_001481915.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385623|gb|ABV51938.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747298|gb|ADN90568.1| Radical SAM domain protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 448

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        SS++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFSSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|294678016|ref|YP_003578631.1| oxygen-independent coproporphyrinogen-III oxidase [Rhodobacter
           capsulatus SB 1003]
 gi|294476836|gb|ADE86224.1| oxygen-independent coproporphyrinogen-III oxidase-2 [Rhodobacter
           capsulatus SB 1003]
          Length = 451

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 129/292 (44%), Gaps = 27/292 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFF 76
           S+ +Y+H PFC + C +C   +   +     + + ++ + E+  ++    P   +S + +
Sbjct: 50  SISLYMHVPFCRRLCWFCACRTQGTQTDAPVKTYAETLIKEVAMLKSHLAPGVKLSRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGT +L+   ++  I + + +   +  N E ++E +P+ ++        ++G+NR S+G
Sbjct: 110 GGGTATLLPADSMRKIAEAVFEAVPLGENGEFSVEIDPNEIDDERMDALAQSGMNRASVG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  +      +GR          + + R+     ++ D++Y LP QT  +    +++ L
Sbjct: 170 IQDFDPFIQSVIGREQTFEVTKMVVDMIRDRGINSLNADILYGLPHQTPQKMTESVEKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-----VDLYNLTQSITSAHGLHA 250
           S   D ++ Y      G            ++PSEN+      ++L++L++ + +  G   
Sbjct: 230 SLKPDRVAFY------GYAHVPWMSRRQSLIPSENLPTPPERLELFHLSRELFTKAGYDV 283

Query: 251 YEISNHSFLGAESLHNL--------NYWRYGD-----YIGIGPGAHSRVKVG 289
             I +H  L  + L           N+  Y D      +G+G  + SR   G
Sbjct: 284 IGI-DHFALPHDGLATALKAGKLRRNFQGYTDDQAEALVGLGASSISRFPQG 334


>gi|237817558|ref|ZP_04596548.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|237787313|gb|EEP61531.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
          Length = 474

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 74  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 133

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 134 TPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 193

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 194 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 239


>gi|15645289|ref|NP_207459.1| coproporphyrinogen III oxidase [Helicobacter pylori 26695]
 gi|3122198|sp|O25376|HEMN_HELPY RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|2313787|gb|AAD07727.1| oxygen-independent coproporphyrinogen III oxidase (hemN)
           [Helicobacter pylori 26695]
          Length = 457

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I + +   S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVF 242


>gi|219668032|ref|YP_002458467.1| HemN domain protein [Desulfitobacterium hafniense DCB-2]
 gi|219538292|gb|ACL20031.1| HemN domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 368

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 162/383 (42%), Gaps = 33/383 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISS 73
           +S+ V+V+ PFC+++      +SH+R    G+E    ++++   E+    +L   +++ S
Sbjct: 2   SSVTVFVNIPFCIRRRR--GESSHIR--PAGKETRNAYLEALEREIDHAGELLAGKTVQS 57

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGG  +++ P  +A +L    + + ++  +E+TI A P ++      G      NRI
Sbjct: 58  IYVGGGAATVLSPDKLARLLLRFKRAYQMAEYLELTIAAAPETLVSPCLSGLNMCNFNRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+      ++ L +LG ++  ++    +  L    +  ++ D++Y +P QT       L 
Sbjct: 118 SVEALCASDKMLDYLGTSYRLADLEDGLTMLGMFKYRNVNADVMYGIPGQTKAALRNSLV 177

Query: 193 RALSY-AVDHLSL--YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             L+  A+ H++L  ++L  ++G               S     D Y  +       G  
Sbjct: 178 TCLALPALSHITLKRFELPEQEGV--------------SAEECRDQYRYSLEYLKGKGFC 223

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            Y   + +  G E  H     +  D+IG G GA S V        I+       +LK   
Sbjct: 224 QYAAGHFAKKGYECRHFYYTCQGMDHIGFGVGAKSYVD----GYGITNTTDLAKYLKWAG 279

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQG 366
           +         +L  + +   F  + L+L EG S +++    G         +LQ   +Q 
Sbjct: 280 QYEEITENVLYLDEKARQKRFAALRLQLAEGFSEEEFAARFGEGAGAAMGPSLQLLLKQS 339

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
           FI  +   R   T+ G+  +D +
Sbjct: 340 FISCLD-GRYVPTEEGLFHIDEI 361


>gi|148260558|ref|YP_001234685.1| oxygen-independent coproporphyrinogen III oxidase [Acidiphilium
           cryptum JF-5]
 gi|146402239|gb|ABQ30766.1| coproporphyrinogen III oxidase, anaerobic [Acidiphilium cryptum
           JF-5]
          Length = 444

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGG 79
           +Y+H PFC   C +C   +         E +  +  TE+  +    G R     I +GGG
Sbjct: 49  LYLHVPFCRTMCWFCGCTTSAVHSVGALERYAAALETEIGRVAAAIGHRLPAGQIHWGGG 108

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +   +A+++ +    EI IE +P ++  +     R   V R+SLGVQ 
Sbjct: 109 TPTALPAPLLRRVHAALARHFALDDTTEIAIEIDPRTLPDDATALLRDLAVTRVSLGVQD 168

Query: 140 LEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                   +GR+ + ++   AA          ++FDL+Y LP QT+   E  +   L+  
Sbjct: 169 FAPAVQAAIGRHQSVAQTKAAADAARAAGIASVNFDLVYGLPFQTIDSLEATIGEVLALG 228

Query: 199 VDHLSLY 205
            D ++LY
Sbjct: 229 PDRIALY 235


>gi|13475361|ref|NP_106925.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14026113|dbj|BAB52711.1| coproporphyrinogen oxidase III [Mesorhizobium loti MAFF303099]
          Length = 449

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 104/195 (53%), Gaps = 4/195 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           +  + + +Y+H P+C + C +C  ++   RRY+    ++++S   E+  +  L G ++ +
Sbjct: 42  ESGDEVSLYLHIPYCDRLCWFCACHTKQTRRYEP-VASYLRSLHAEIATVAGLVGGKAHV 100

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++ FGGG+P++++P+++  +   +  ++   ++ +I++E  P+ ++        + G+ 
Sbjct: 101 RAVHFGGGSPTMLKPEDMVALGTVLRDSFDFLADAKISVEIEPNDMDEARLDTLAEIGMA 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R SLGVQ  + +  + + R  +  +  A +   R+     ++ DL+Y LP QT       
Sbjct: 161 RASLGVQDFDPKVQKAINREQSFLQTKAVVDGIRSRGVGSVNLDLLYGLPHQTRESVCST 220

Query: 191 LQRALSYAVDHLSLY 205
           + +AL+   D ++L+
Sbjct: 221 VAQALTLEPDRMALF 235


>gi|306841196|ref|ZP_07473912.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
 gi|306288822|gb|EFM60140.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
          Length = 474

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 74  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 133

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 134 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 193

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 194 FDPKVQKAINRIQTAKTTLETVSSLRKNNIKAINFDLIYGLPHQTV 239


>gi|296536884|ref|ZP_06898929.1| oxygen-independent coproporphyrinogen III oxidase [Roseomonas
           cervicalis ATCC 49957]
 gi|296262785|gb|EFH09365.1| oxygen-independent coproporphyrinogen III oxidase [Roseomonas
           cervicalis ATCC 49957]
          Length = 441

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           ++L +YVH PFC   C YC  ++ V R       +    L E   +         +S++ 
Sbjct: 45  DALSLYVHIPFCRSLCWYCGCHTAVTRLPARLARYTDGLLAEAALLAAALPAHGGVSALH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I  + ++ +L  +  ++    N E+ IE +P  +         + G+ R SL
Sbjct: 105 LGGGTPSAIGAEGLSRLLAALRAHFPFRDNAELAIELDPRVLTPVIADALAEGGITRASL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ ++ +    +GR   + +   A+ L R      ++ DL+Y LP Q + + E   + A
Sbjct: 165 GVQDIDPEVQARIGRIQPSEQVARAVALLRERGIGAINLDLMYGLPGQGVAEAEASARFA 224

Query: 195 LSYAVDHLSLY 205
                D ++++
Sbjct: 225 AELGADRVAVF 235


>gi|57237418|ref|YP_178431.1| coproporphyrinogen III oxidase [Campylobacter jejuni RM1221]
 gi|57166222|gb|AAW35001.1| radical SAM domain protein [Campylobacter jejuni RM1221]
 gi|315057786|gb|ADT72115.1| Oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 456

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI+ + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|163738169|ref|ZP_02145585.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
 gi|161388785|gb|EDQ13138.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
          Length = 451

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 94/191 (49%), Gaps = 6/191 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFF 76
           + VY+H PFC + C +C   +   +     E++I +   E+  + ++   G R +  + +
Sbjct: 51  VSVYIHIPFCERLCWFCACRTQGTQTLSPVESYIGTVEKELSLLAEILPEGLR-MGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   I      +++ E ++E +P+ V+        K G+NR S+G
Sbjct: 110 GGGTPTILPPALIHRLAQSIKSAVPPTTDWEFSVEIDPTMVDREKIAALAKEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +Q  + +    +GR    + + A  A   A  I   ++ DL+Y LP Q   +    + + 
Sbjct: 170 IQDFDPEVQTAIGRIQPFDVTAACVADLRAAGIH-SLNTDLVYGLPHQDAARIAETVDKV 228

Query: 195 LSYAVDHLSLY 205
           L+ A D ++L+
Sbjct: 229 LTLAPDRVALF 239


>gi|326403753|ref|YP_004283835.1| oxygen-independent coproporphyrinogen III oxidase [Acidiphilium
           multivorum AIU301]
 gi|325050615|dbj|BAJ80953.1| oxygen-independent coproporphyrinogen III oxidase [Acidiphilium
           multivorum AIU301]
          Length = 444

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGG 79
           +Y+H PFC   C +C   +         E +  +  TE+  +    G R     I +GGG
Sbjct: 49  LYLHVPFCRTMCWFCGCTTSAVHSVGALERYAAALETEIGRVAAAIGHRLPAGQIHWGGG 108

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +   +A+++ +    EI IE +P ++  +     R   V R+SLGVQ 
Sbjct: 109 TPTALPAPLLRRVHAALARHFALDDTTEIAIEIDPRTLPDDATALLRDLAVTRVSLGVQD 168

Query: 140 LEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                   +GR+ + ++   AA          ++FDL+Y LP QT+   E  +   L+  
Sbjct: 169 FAPAVQAAIGRHQSVAQTKAAADAARAAGIASVNFDLVYGLPFQTIDSLEATIGEVLALG 228

Query: 199 VDHLSLY 205
            D ++LY
Sbjct: 229 PDRIALY 235


>gi|225628483|ref|ZP_03786517.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
 gi|225616329|gb|EEH13377.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
          Length = 458

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 58  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 117

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 118 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 177

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 178 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 223


>gi|23012875|ref|ZP_00052862.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Magnetospirillum magnetotacticum MS-1]
          Length = 451

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 92/180 (51%), Gaps = 4/180 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           L +Y+H  FC + C +C  ++ + +       ++ +   E++ + +    R +   I FG
Sbjct: 47  LSLYLHIAFCAEMCWFCGCHTKITKRYAPVAAYMDALWREVELVAEALPTRMTARHIHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+++  ++    +D +   + + +  E+ +E +P + + +  +    AGV R S+GV
Sbjct: 107 GGSPTILSSEDFVRTIDLLKSRFILKAGAEVAVELDPRTADESYVKAMAGAGVTRASIGV 166

Query: 138 QSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q L+++  + + R   +  +E +    L ++  P ++ DLIY LP Q++      + +A+
Sbjct: 167 QDLDDKVQQAINRIQPYEVTERVVEW-LGKHGVPEVNIDLIYGLPHQSLDGLLATIDKAV 225


>gi|317014086|gb|ADU81522.1| coproporphyrinogen III oxidase [Helicobacter pylori Gambia94/24]
          Length = 457

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I + +   S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLY 205
           QT   +   L+  L    D L+++
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVF 242


>gi|295690399|ref|YP_003594092.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
 gi|295432302|gb|ADG11474.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
          Length = 453

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           + L VYVH PFC + C YC  ++ +         F ++ + E+  +    G    ++ + 
Sbjct: 49  DRLSVYVHVPFCRRLCWYCGCHTSIAHSYKRVGTFFETLMREVDLVAARLGKHDGLAHLH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+ + P++ A ++  +   +      EI  E +P  +           GVNR+SL
Sbjct: 109 FGGGSPNALSPEDFAALVTRLKTVFRPRPGAEIAAELDPGMLSEAFVDAAGAVGVNRVSL 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +      + R         A    R +  + ++FDL+Y LP QT        + A
Sbjct: 169 GVQTFDPTVQALVNRIQPYDHVARATERLRAVGVKGLNFDLMYGLPGQTPENVHESARLA 228

Query: 195 LSYAVDHLSLY 205
           +    D ++++
Sbjct: 229 VQLRPDRVAVF 239


>gi|161621239|ref|YP_001595125.1| coproporphyrinogen III oxidase [Brucella canis ATCC 23365]
 gi|260568655|ref|ZP_05839124.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
 gi|161338050|gb|ABX64354.1| oxygen-independent coproporphyrinogen III oxidase [Brucella canis
           ATCC 23365]
 gi|260155320|gb|EEW90401.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
          Length = 450

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|254720742|ref|ZP_05182553.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|265985798|ref|ZP_06098533.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306839304|ref|ZP_07472120.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
 gi|264664390|gb|EEZ34651.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306405552|gb|EFM61815.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 2/167 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+ 
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVA 216


>gi|306845355|ref|ZP_07477930.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
 gi|306274271|gb|EFM56083.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 2/167 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+ 
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVA 216


>gi|294056296|ref|YP_003549954.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615629|gb|ADE55784.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
          Length = 454

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 2/194 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +Y H PFC   C +C  N      +   ++++     E+  +     P R   
Sbjct: 45  ESDAPLSLYFHLPFCETLCWFCGCNMIPTLDRTKADDYLDLVEQELAMLAPKVAPGRKAV 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTP+    + I  +   I +++    + E ++E +P  +   +   + + G+ R
Sbjct: 105 QLHFGGGTPNFFGAEQIDRLAGLIDQHFEFVPDAEKSVELDPRRLGAEHVDAFARMGLTR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
            S GVQ    +    + R       +AA+ L R+  F  ++ DLIY LPKQ+   +   L
Sbjct: 165 ASFGVQDCNPEVQEAIHRIQPQEMNVAAMELLRSRGFDSVNLDLIYGLPKQSPESFNQTL 224

Query: 192 QRALSYAVDHLSLY 205
              L    D  +++
Sbjct: 225 DDVLELKPDRFAIF 238


>gi|261878826|ref|ZP_06005253.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           bergensis DSM 17361]
 gi|270334567|gb|EFA45353.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           bergensis DSM 17361]
          Length = 453

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 5/198 (2%)

Query: 2   KYLSAY-ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEM 59
           +Y+ A  E+N TG  S  L  Y+H PFC   C YC  NS++  R     + ++++   E+
Sbjct: 30  RYIEAVDESNHTG--SPMLSFYLHMPFCRHLCHYCGCNSYLMPRTGDAVDRYVKALHREI 87

Query: 60  QWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             +   L   R I+ I +GGG+P+ +    +  + + +   +      EI IE +P  + 
Sbjct: 88  DLVAAHLDRHRPIAQIHYGGGSPTAMPVGVLRELNEHLLSLFPTIDRPEIAIECHPGYLT 147

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
           + ++Q   ++  NR S+GVQ ++E+ L+ + R  +       + L       ++ DL++ 
Sbjct: 148 LEDWQQLTESHFNRFSIGVQDMDERVLKTVNRTPSLLPLQQIVDLLHVAGATVNMDLLFG 207

Query: 179 LPKQTMTQWEMELQRALS 196
           LP QT   +   ++RA++
Sbjct: 208 LPYQTAGSFVESIRRAIA 225


>gi|312876436|ref|ZP_07736420.1| Coproporphyrinogen dehydrogenase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796794|gb|EFR13139.1| Coproporphyrinogen dehydrogenase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 471

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 11/244 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEM--QWMRQLTGPRSIS 72
           +S  +Y+  P C  KC YC F+ H   R+ K     +  S + E+   + +       I 
Sbjct: 154 SSACLYIGIPICPTKCLYCSFSCHEITRQVKSLIGMYTDSLICELGKTYQKIEENKNRIV 213

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           +I+FGGG+P+++  +NI  I   + +N       EIT EA  P +++    Q   +   +
Sbjct: 214 AIYFGGGSPAVLGKENIKKIFTNLFENLEKKHIQEITFEAGRPDTIDEKILQYLSEINQD 273

Query: 132 ---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
              R+ +  Q+  + +L+ +GRNH+  +   A   A +  F  ++ D+I  LP +    +
Sbjct: 274 LNVRLCINPQTSNDNTLKIIGRNHSFEDIKRAFAQAYKYSFKNINSDVILGLPGEDENDY 333

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  +   L  +   ++++ L+I++ +L     K  +     E    +L + TQ I   HG
Sbjct: 334 KRTIDDVLKLSPASITVHTLSIKRASLL--RFKWNEYKFMDEETVNNLLDWTQYILEEHG 391

Query: 248 LHAY 251
              Y
Sbjct: 392 YIPY 395


>gi|296114287|ref|ZP_06832941.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295979048|gb|EFG85772.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 454

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 2/170 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           ++L +Y+H PFC   C +C  N+ V R    +  +    + E++ +  QL     +S + 
Sbjct: 47  DALSLYLHVPFCDTLCRFCGCNTAVLRSADARAAYAALLIEELRRVTEQLGAGHPVSHLQ 106

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ +    +  ++  I  ++T+  + EI+IE +P  +         + G NR SL
Sbjct: 107 WGGGTPTTLPVGTLRQVMQTIRNSFTLLPDAEISIEIDPRHLPAQYPAVLHELGFNRASL 166

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTM 184
           GVQ ++       GR  +  +    I   R    R ++ DLIY LP+Q++
Sbjct: 167 GVQDIDPTVQEACGRIQSLEQTRTCIDALRGAGIRAINIDLIYGLPRQSV 216


>gi|294853026|ref|ZP_06793698.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|294818681|gb|EFG35681.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
          Length = 458

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 58  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 117

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 118 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 177

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 178 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 223


>gi|86148937|ref|ZP_01067169.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597217|ref|ZP_01100452.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148926455|ref|ZP_01810138.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205355986|ref|ZP_03222754.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|85840295|gb|EAQ57552.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190278|gb|EAQ94252.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|145844618|gb|EDK21724.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205346110|gb|EDZ32745.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284925634|gb|ADC27986.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315930669|gb|EFV09690.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 448

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMK--NKGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI+ + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|23500911|ref|NP_700351.1| coproporphyrinogen III oxidase [Brucella suis 1330]
 gi|163845515|ref|YP_001623170.1| coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|254706439|ref|ZP_05168267.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|254711273|ref|ZP_05173084.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|254711874|ref|ZP_05173685.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|256015958|ref|YP_003105967.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|256030098|ref|ZP_05443712.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|256158269|ref|ZP_05456178.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|256252790|ref|ZP_05458326.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|260166852|ref|ZP_05753663.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|261219871|ref|ZP_05934152.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261313889|ref|ZP_05953086.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261318870|ref|ZP_05958067.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261319505|ref|ZP_05958702.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|261756231|ref|ZP_05999940.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|265987125|ref|ZP_06099682.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|265996787|ref|ZP_06109344.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|23464582|gb|AAN34356.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           1330]
 gi|163676238|gb|ABY40348.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           ATCC 23445]
 gi|255998618|gb|ACU50305.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|260918455|gb|EEX85108.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261292195|gb|EEX95691.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|261298093|gb|EEY01590.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261302915|gb|EEY06412.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261736215|gb|EEY24211.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|262551084|gb|EEZ07245.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|264659322|gb|EEZ29583.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|254702440|ref|ZP_05164268.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|261753005|ref|ZP_05996714.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|261742758|gb|EEY30684.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|254699319|ref|ZP_05161147.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261749762|ref|ZP_05993471.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261739515|gb|EEY27441.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|256059748|ref|ZP_05449943.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261323726|ref|ZP_05962923.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261299706|gb|EEY03203.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC   C YC  ++ +        +++     E++ + RQ     ++  I FGGG
Sbjct: 50  LYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQS
Sbjct: 110 TPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQS 169

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 170 FDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|148558257|ref|YP_001258045.1| coproporphyrinogen III oxidase [Brucella ovis ATCC 25840]
 gi|148369542|gb|ABQ62414.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ovis
           ATCC 25840]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 4/178 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTG 67
           N++ G    SL  Y+H PFC   C YC  ++ +        +++     E++ + RQ   
Sbjct: 40  NSIPGDQDTSL--YLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGR 97

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             ++  I FGGGTP+ I+P     ++  +      +  +   +E +P  +          
Sbjct: 98  SFNLGEIHFGGGTPTNIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAY 157

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
           +G+ R SLGVQS + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 158 SGITRASLGVQSFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215


>gi|315931558|gb|EFV10524.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 340

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        SS++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFSSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|218562021|ref|YP_002343800.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|112359727|emb|CAL34513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
          Length = 448

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMK--NKGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI+ + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|83311797|ref|YP_422061.1| coproporphyrinogen III oxidase [Magnetospirillum magneticum AMB-1]
 gi|82946638|dbj|BAE51502.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Magnetospirillum magneticum AMB-1]
          Length = 451

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           L +Y+H  FC + C +C  ++ + +       ++ +   E++ + +    R +   + FG
Sbjct: 47  LSLYLHIAFCAEMCWFCGCHTKITKRYAPVAAYMDALWREVELVAEALPTRMTARHVHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+++  ++    +D +  ++ +  + E+ +E +P + +    +    AGV R S+GV
Sbjct: 107 GGSPTILSSEDFVRTIDLLKSHFILKPDAEVAVELDPRTADEAYVKAMAGAGVTRASIGV 166

Query: 138 QSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q L+++  + + R   +  +E +    L +   P ++ DLIY LP QT+      + +A+
Sbjct: 167 QDLDDKVQQAINRIQPYEVTERVVEW-LGKYGVPEVNIDLIYGLPHQTLDGLLATIDKAV 225


>gi|146276583|ref|YP_001166742.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17025]
 gi|145554824|gb|ABP69437.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 450

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 134/332 (40%), Gaps = 39/332 (11%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
           +S+ +Y+H PFC + C +C   +           +  +  +E+  +     P   +S + 
Sbjct: 49  SSVSLYLHIPFCRRLCWFCACRTQGTSSDAPVRAYAAALKSEIALIHARLAPGVRLSRMH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+L+ P  I  ++  I          E ++E +P+ ++        +AG+NR+S+
Sbjct: 109 WGGGTPTLLPPDLIRELVLAIRDALPYGPETEFSVEVDPNEIDAARLDALFEAGMNRVSI 168

Query: 136 GVQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           GVQ  +    + +GR   H+ +  +    L       +  D++Y LP QT       +Q+
Sbjct: 169 GVQDFDPMIQKAIGREQGHDLTRRLTE-DLRACGLEGLDIDMLYGLPHQTPQGIAATVQK 227

Query: 194 ALSYAVDHLSLY-----------QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L+ + D +++            QL I    +     + G      + +  D Y      
Sbjct: 228 LLALSPDRVAVLGYAHVPAISRRQLMIPTAAIPRPEERLGLFETARDLILWDGYQPV--- 284

Query: 243 TSAHGLHAYEISNHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAI 295
               GL  +  +      A +   L  ++  Y D      IGIG  A SR   G  + A 
Sbjct: 285 ----GLDRFARAGDPLAHARACGRLRRSFAGYTDDRAETLIGIGASAISRFPQGFTQNAP 340

Query: 296 SIEKHPESWLKMVRKN------GHAVVEKEFL 321
           S   H    L+ +R        GHA+ +++ L
Sbjct: 341 STSDH----LRAIRSGRFSTSRGHALTDEDRL 368


>gi|294636254|ref|ZP_06714664.1| HutW protein [Edwardsiella tarda ATCC 23685]
 gi|291090457|gb|EFE23018.1| HutW protein [Edwardsiella tarda ATCC 23685]
          Length = 361

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 1/153 (0%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I +I+FGGGTPS +  + +  ++  +  +  ++++ EIT+E    + +        +AG 
Sbjct: 10  IHAIYFGGGTPSALSAEQLRRLIGQLRSSLPLAADCEITVEGRIFNFDAARIDACLEAGA 69

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S+G+Q+ + +  + +GR  +  EAIA +  LA      +  DL++ LP QT   W+ 
Sbjct: 70  NRFSIGIQTFDTRLRQRMGRRADRDEAIAFLRDLAERDRAAVICDLMFGLPGQTAASWQN 129

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +L    +  +D + LY L +   T   K    G
Sbjct: 130 DLDIVSALPLDGVDLYALNLLPSTPLAKAVDSG 162


>gi|307154070|ref|YP_003889454.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
 gi|306984298|gb|ADN16179.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
          Length = 469

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTG 67
           N   +  + L +Y H PFC   C +C  N  V + +    +   ++L++        +  
Sbjct: 54  NRGNKAKSPLSLYFHIPFCQSACYFCGCNVIVTQQQARAVDPYLNYLSKNIESVSSFIDS 113

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R +  + +GGGTP+ +  ++I ++ + I +++    + EI+IE NP  V+ N     R 
Sbjct: 114 DRPVVQLHWGGGTPNYLNLEHIEILWNKINQHYRFDEDAEISIEINPRYVDRNYILFLRH 173

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G NRIS G+Q    +    + R          +   R   F  ++ DLIY LP Q    
Sbjct: 174 IGFNRISFGIQDFNPRVQEAINRVQPEEMLFNVMSWMREAGFESVNVDLIYGLPYQNRDT 233

Query: 187 WEMELQRALSYAVDHLSLYQL 207
           ++  +Q+ +    D ++++  
Sbjct: 234 FKETIQKTIKLNPDRIAVFNF 254


>gi|148872848|gb|ABR15051.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni]
          Length = 391

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 7   SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMK--NKGFDFTSMYVG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI+ + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 64  GGT-TLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 118

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 119 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 178

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 179 KNLAPQQITTYPL 191


>gi|1724130|gb|AAB38508.1| oxygen-independent coproporphyrinogen oxidase [Rhodobacter
           sphaeroides]
          Length = 452

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 142/338 (42%), Gaps = 25/338 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + VY+H PFC + C +C   +   +     E ++ + L E++ +++ L        + +G
Sbjct: 51  ISVYIHVPFCERLCWFCACPTQGTQTLAPVEAYVGTLLQELELVKKHLPAGVKAGRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G+
Sbjct: 111 GGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIGI 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     +GR        A +   AR     ++ DL+Y LP Q        + + L 
Sbjct: 171 QDFTDIVQSAIGREQPFENTRACVETCARYGVHSLNTDLVYGLPHQNRESLAATIDKVLQ 230

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEIS- 254
              D ++++           K  K  D  VLP++    +L NL   + +  G     I  
Sbjct: 231 LGPDRVAIFGYA--HVPWMAKRQKLIDENVLPNDMERHELANLAAKMFTEGGFERIGIDH 288

Query: 255 ----NHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRVKVG----SHRVAISIEK 299
               + S   A     L  N+  Y D      +GIG  + S+ + G    +   A  I+ 
Sbjct: 289 FARPDDSMAVAARTGKLGRNFQGYTDDTCPTLLGIGASSISKFEQGYLQNTAATAAYIKA 348

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
             E  L   R  GH + ++++L    +A E +M   RL
Sbjct: 349 IEEGRLPAYR--GHRMTDEDYLHG--RAIEMIMCEFRL 382


>gi|259417595|ref|ZP_05741514.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
 gi|259346501|gb|EEW58315.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
          Length = 445

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 4/190 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   +       ++     E+  + R L     ++ + +G
Sbjct: 45  ISLYVHVPFCRRLCWFCACRTQGTQSDSPVRAYLDVLKQEIALLARHLPEGVRLARLHWG 104

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+  + +A + + I     ++   E ++E +P+ ++         AG+NR S+GV
Sbjct: 105 GGTPTLLSAEMMAELAEAIFAVTPMAKGGEFSVEIDPNEIDEPRLDALAAAGMNRASIGV 164

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q  + +    +GR         A+ +  AR I   ++ D+++ LP QT  +    +Q+ L
Sbjct: 165 QDFDPEIQETIGRIQPFDLTRDAVDMIRARGI-ASLNADILFGLPHQTRMRMTESVQKLL 223

Query: 196 SYAVDHLSLY 205
           S + D ++LY
Sbjct: 224 SLSPDRVALY 233


>gi|148872850|gb|ABR15052.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni]
 gi|148872852|gb|ABR15053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni]
          Length = 391

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        SS++ G
Sbjct: 7   SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFSSMYVG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 64  GGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 118

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 119 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 178

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 179 KNLAPQQITTYPL 191


>gi|118475032|ref|YP_892793.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885813|ref|ZP_06009852.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|118414258|gb|ABK82678.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 435

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CP+C F+ +       ++ F  S   EM+ +++        S++ GGGT
Sbjct: 48  LYAHVPFCHTFCPFCSFHKYDYDESAAKKYF-YSLRLEMEQIKE--AGFDFHSMYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI    +   L+   K + ++   EI+ E +P+ +E NN + +    ++R+S+GVQS 
Sbjct: 105 -TLINENELLKTLEHAKKLFNIN---EISCETDPNHIEPNNLKCF-SGLIDRLSIGVQSF 159

Query: 141 EEQSLRFLGRNHNASEA---IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            ++ L+ + R          I  +  A  I P  S DLI+  P QT  +   ++Q A + 
Sbjct: 160 NDEILKKVARYSKFGSKDLLIEKLSKAVGILPITSIDLIFNFPFQTKDELLYDIQTATAI 219

Query: 198 AVDHLSLYQL 207
             + ++ Y L
Sbjct: 220 DSEQVTFYPL 229


>gi|126739544|ref|ZP_01755236.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
 gi|126719190|gb|EBA15900.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
          Length = 454

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 19/322 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           + + +YVH PFC K C +C   +   +     E +++   +E+  +  QL     IS + 
Sbjct: 49  SQISLYVHIPFCRKLCWFCACRTQGTQSNEPIEAYLEVLKSEISLVASQLPEGLEISRLH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+++    I  +    A +  +S   E ++E +P  ++        +AG+ R S+
Sbjct: 109 WGGGTPTILSAAQIRDLAQRFADHLPLSPTTEFSVEVDPWEIDQERCDALLEAGMTRASI 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q   +   + +GR  +  +   A  L R     +++ +++  LP QT        Q  
Sbjct: 169 GIQDFNDHIQQVIGRQQSFEQTNGAARLLRAAGLQKLNAEILCGLPYQTQPSITETTQLL 228

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS   D +++     + G    +     D  LP      DL+    ++    G  A  I 
Sbjct: 229 LSLTPDRVAVSDYIHQPGMARRQSMIPTD-SLPKPEEKFDLFETAAALLRWDGYEAIGI- 286

Query: 255 NHSFLGAESL---HNLNYWRYG----------DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           +H     +SL    N    R G            IG+G  A SR   G  +   S  K+ 
Sbjct: 287 DHFARSDDSLTLARNTGRLRRGFQGYSADPSEVLIGLGASAVSRFPQGYAQNEASTAKYS 346

Query: 302 ESWLK--MVRKNGHAVVEKEFL 321
            +  K     + GHA   ++ L
Sbjct: 347 AAIKKGRFATRAGHAFCGEDAL 368


>gi|315927834|gb|EFV07159.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 288

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMK--NKGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI+ + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|284038447|ref|YP_003388377.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
 gi|283817740|gb|ADB39578.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
          Length = 460

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 15/201 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
           S  + +Y+H PFC   C +C  N  + R    +E +I + L E     +W+ +   PR I
Sbjct: 49  SAGISLYIHLPFCESLCTFCGCNKRITRNHDVEEPYIDAILNEWEMYCEWLPER--PR-I 105

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNW------TVSSNVEITIEANPSSVEVNNFQGY 125
           + +  GGGTPS   P  +  ++ GI + W      T +S  +   E +P++    + +  
Sbjct: 106 AELHLGGGTPSFFSPHELRRLMTGIFR-WADPVPTTETSGPDFGWEGHPNNTTGEHLKTL 164

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
            + G  R+S GVQ  +    + + R+   +        AR I +  +S DL++ LP Q  
Sbjct: 165 YEYGFRRVSFGVQDYDPVVQKAIHRHQPFAHVQRVTQQARAIGYTSISHDLVFGLPFQQQ 224

Query: 185 TQWEMELQRALSYAVDHLSLY 205
           +     + + LS   D ++ Y
Sbjct: 225 SSITDTILQTLSLRPDRIAFY 245


>gi|295133760|ref|YP_003584436.1| coproporphyrinogen III oxidase [Zunongwangia profunda SM-A87]
 gi|294981775|gb|ADF52240.1| coproporphyrinogen III oxidase [Zunongwangia profunda SM-A87]
          Length = 452

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIF 75
           N + +Y+H P+C   C +C  N  + +  + +  +I+S L E   ++        IS + 
Sbjct: 48  NGISLYIHLPYCESMCTFCGCNKRITKNHLVEIPYIKSLLIEWDLYVSLFEETPKISELH 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+    +N+ L++ G+ K+    +N +++ E +P++    +       G  R+S 
Sbjct: 108 IGGGTPTFFSSENLQLLIAGLFKDPKDRANAKLSFEGHPNNTSHKHLDVLANLGFTRVSY 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ    +  + + R            LAR   +  +  D+I+ LP QT    E  +   
Sbjct: 168 GVQDYNLKVQKAINRVQPFENVQKVTTLARQAGYTSIGHDIIFGLPFQTTADIENTINLT 227

Query: 195 LSYAVDHLSLY 205
                + ++ Y
Sbjct: 228 KKLRPERIAFY 238


>gi|72161143|ref|YP_288800.1| coproporphyrinogen III oxidase [Thermobifida fusca YX]
 gi|71914875|gb|AAZ54777.1| coproporphyrinogen III oxidase, anaerobic [Thermobifida fusca YX]
          Length = 447

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 12/208 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----LTGP 68
           + +++L +Y H PFC  +C +C+  +      V     + ++L  +    +     L G 
Sbjct: 47  EPTDALFLYFHIPFCEVRCGFCNLFTRA----VPPAEQVTAYLDALARQAEAVADALGGT 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              +   FGGGTP+ +    +  + D   +   V  + +  ++E +P++           
Sbjct: 103 ARFARAAFGGGTPTYLTADELHRLYDLADRVLGVDLAAIPTSVETSPATATPERLDVVAA 162

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
            G +RIS+GVQS  +     +GR    ++   A+   R+  PR  ++ DLIY +  QT  
Sbjct: 163 RGASRISIGVQSFLDAEAHAVGRPQRRADVDRALAAIRSHAPRARLNIDLIYGIAGQTPD 222

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGT 213
            W   L  A++Y  + + LY L +   T
Sbjct: 223 SWRYSLDAAVAYRPEEIYLYPLYVRPLT 250


>gi|163743763|ref|ZP_02151136.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
 gi|161382912|gb|EDQ07308.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
          Length = 451

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISS 73
           +  + VY+H PFC + C +C   +   +     E++I +   E+  +  +   G R +  
Sbjct: 48  AAPVSVYIHIPFCERLCWFCACRTQGTQTLSPVESYIGTVEKELSLLADILPEGLR-MGR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+++ P  I  +   I      +++ E ++E +P+ V+        K G+NR 
Sbjct: 107 LHWGGGTPTILPPALIHRLAQSIKSAVPPTTDWEFSVEIDPTMVDREKIAALAKEGMNRA 166

Query: 134 SLGVQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           S+G+Q  + +    +GR    + + A  A   A  I   ++ DL+Y LP Q   +    +
Sbjct: 167 SIGIQDFDPEVQTAIGRIQPFDVTAACVADLRAAGIH-SLNTDLVYGLPHQDAARIAETV 225

Query: 192 QRALSYAVDHLSLY 205
            + L+ A D ++L+
Sbjct: 226 DKVLTLAPDRVALF 239


>gi|121613094|ref|YP_001000074.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005032|ref|ZP_02270790.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87250049|gb|EAQ73007.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 448

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +L+ A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|288920274|ref|ZP_06414587.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
 gi|288348298|gb|EFC82562.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
          Length = 357

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 17/299 (5%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V+ + E T+E N    +    +   ++ +NR+SLGVQS + + L  +G  H A ++   I
Sbjct: 7   VADDAEFTLEGNARDFDDEKIEYVAQSRINRLSLGVQSFQPEILGVIGSPHAAEDSARVI 66

Query: 162 -HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                  F  +  DL+Y +P  T+  W+ +L+   +  V H ++Y   I + T+  K+  
Sbjct: 67  REFQARGFRNIQLDLMYNMPGHTLDIWKRDLETLATLDVPHFTIYLYRIHRDTIQDKLIS 126

Query: 221 DGDLVLPSE---NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR-YGDYI 276
            G L  P +    +   +Y     I    G   Y + +    G E+++N   W+ Y D +
Sbjct: 127 RGRLSAPKDPEGPMVKAMYREAVEIAKQMGYTMYMVDHFCKPGYENMYNHWNWKVYIDTL 186

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE--KEFLSSEQQADEFLMMG 334
            +GPG++S      +R  +  E   E ++  V + G  ++    + LS   + + +++  
Sbjct: 187 AVGPGSYSYFD--GYR--LGTETDVEKYIDAV-EGGDLLISTITDKLSPRVERERYVVFA 241

Query: 335 LRLREGISVKDWEMLAGRNL--DIECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           L   E I    +    G +   D   E   L+R+G +E     R+R TQ G+    +VI
Sbjct: 242 LLYYE-IEYSFYRDKFGTSFLEDFADELARLERKGLVELTD-DRMRLTQLGLIWHTNVI 298


>gi|167840710|ref|ZP_02467394.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           MSMB43]
          Length = 490

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 18/207 (8%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDF----------NSHVRRYKVGQENFIQSFLTEMQWM 62
           GQG  +  +Y H+P C   C +C++           + + R+          +  ++ W 
Sbjct: 61  GQGKPA-HLYYHFPLCEYICHFCNYVKQLASPTSRGAQLDRWTDALIKESTLYARQVPW- 118

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNN 121
             +TG   I S + GGGT +++ P ++  ILD +   + V+   E+ IE NP +  +++ 
Sbjct: 119 --VTG-ALIESFYIGGGTAAVLTPAHLKRILDHVRSTFHVTPECELNIEGNPDNFCDIDK 175

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALP 180
            +     G NR S+GVQS   +  +F  R H    +  AI +L    FP  + D+++ LP
Sbjct: 176 VRALGDIGFNRFSVGVQSFTPEVNQFTNRGHTPDMSRQAILNLRSTGFP-FNVDMMFGLP 234

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQL 207
            QT      +L+  +   V  +++Y+L
Sbjct: 235 HQTPETVSEDLRTLVELEVPTITIYRL 261


>gi|254472774|ref|ZP_05086173.1| radical SAM domain protein [Pseudovibrio sp. JE062]
 gi|211958238|gb|EEA93439.1| radical SAM domain protein [Pseudovibrio sp. JE062]
          Length = 257

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 21/214 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSISS 73
            +  +Y+H P+C +KC +C F+            +I   + ++  + Q+T   G + I S
Sbjct: 53  TTFQLYLHIPYCAQKCSFCAFSGGNTLDFADAREYIALLIKQLDKILQITPAYGQKRIRS 112

Query: 74  IFFGGGTPSLIEPQNIALI-----LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +  GGG+P L+  Q   L+     LDGI        N EI IE  PS+ + +        
Sbjct: 113 VHIGGGSPDLVRGQIGKLLSHVRGLDGI------DDNTEIAIECAPSTTKPDFLDELIAH 166

Query: 129 GVNRISLGVQSLEEQ---SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            V ++S GVQS+  Q   ++R L R+    E +      +   P ++ D I  LP QT+ 
Sbjct: 167 KVTKLSFGVQSINPQIRANVR-LPRSMRKVEELCEYVAGQT--PIVNADFITGLPGQTLA 223

Query: 186 QWEMELQRALSYAV-DHLSLYQLTIEKGTLFYKM 218
             E +L  AL + V + +S Y LT     L++ M
Sbjct: 224 DVEADLSYALKHPVINAVSTYLLTPALPLLWWLM 257


>gi|119776736|ref|YP_929476.1| coproporphyrinogen III oxidase [Shewanella amazonensis SB2B]
 gi|119769236|gb|ABM01807.1| coproporphyrinogen III oxidase [Shewanella amazonensis SB2B]
          Length = 444

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 135/312 (43%), Gaps = 25/312 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+    +    +  FI S   EM   ++L       S++ GGGT
Sbjct: 62  LYAHVPFCHTLCSYCTFHRFTFKEDKARAYFI-SLRKEMTMAKELG--YDFESMYIGGGT 118

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E +    I           S  E++ E++P  +    F+   K  V+R+S+GVQS 
Sbjct: 119 TTVLEDELARTIEHA---RLLFPSIKEVSCESDPRHLASPEFRQL-KGLVDRMSIGVQSF 174

Query: 141 EEQSLRFLGRNHNASEAIAA---IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+   R       +     I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 175 DDGILKMTDRFEKFGSGLQTFDRIQAAKELFPIINVDLIFGFRGQTEEVIQRDLDMARRL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A      +Q +TS  G +  ++S+ +
Sbjct: 235 DPRQITTYPLMITHQT---RKSVKGKLAAPQADLA---RQYSQILTSLRGQYN-QLSSWA 287

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE-------SWLKMVR 309
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E       S  +  R
Sbjct: 288 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLGDTLYVNTFSLRKYQERIEAGKMSVEQQKR 347

Query: 310 KNGHAVVEKEFL 321
            +  A+++  FL
Sbjct: 348 YDTKAIMQYRFL 359


>gi|291287047|ref|YP_003503863.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884207|gb|ADD67907.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 439

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 13/191 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGG 79
           +Y+H PFC   CPYC F+    R+K+ +E   + FL   + MR       + +S +FGGG
Sbjct: 68  LYIHIPFCATLCPYCSFH----RFKIHEETARKYFLLLREEMRMTADLGYNFTSAYFGGG 123

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           T S++ P  +A  ++   + + +    EI+ E +P+ ++  + + +    ++R+S+GVQS
Sbjct: 124 TTSIL-PDELAKTIELARELFDIK---EISCETDPNHIDDASMK-HTVGRIDRLSVGVQS 178

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI---FPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L  +GR               NI   F  ++ D+IY  P QT  +   +++    
Sbjct: 179 FNDMHLESIGRLEKFGSGEKQFEKISNILKEFSVVNIDMIYNFPSQTEAELITDIKTVRK 238

Query: 197 YAVDHLSLYQL 207
            +   ++ Y L
Sbjct: 239 LSPQQVTFYPL 249


>gi|146277024|ref|YP_001167183.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17025]
 gi|160359134|sp|P95651|HEMN_RHOS5 RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|145555265|gb|ABP69878.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 452

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + VY+H PFC + C +C   +   +     E ++ + L E++ +++ L        + +G
Sbjct: 51  ISVYIHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKKHLPAGVKAGRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G+
Sbjct: 111 GGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIGI 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     +GR        A +  L R     ++ DL+Y LP Q        + + L 
Sbjct: 171 QDFTDIVQSAIGREQPFENTRACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVLQ 230

Query: 197 YAVDHLSLY 205
              D ++++
Sbjct: 231 LGPDRVAIF 239


>gi|254445107|ref|ZP_05058583.1| oxygen-independent coproporphyrinogen III oxidase [Verrucomicrobiae
           bacterium DG1235]
 gi|198259415|gb|EDY83723.1| oxygen-independent coproporphyrinogen III oxidase [Verrucomicrobiae
           bacterium DG1235]
          Length = 465

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFG 77
           L +YVH P+C   C +C     +       + ++     E++   +L    R +  + FG
Sbjct: 62  LSLYVHVPYCRSLCWFCGCAKIISTNTALADRYLDYLAIEVRRYAELIRSGRKVVQLHFG 121

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P  I  +   +  ++ +  + EI++E +P ++       +   GVNR S+GV
Sbjct: 122 GGTPNFLSPSQIKRMAGILRGSFEIDESAEISVELDPRTLSRAQVLAFTDLGVNRASIGV 181

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q +  +    + R          I   R      ++ DLIY LP QT   ++  L+  L+
Sbjct: 182 QDVNTKVQEAIHRIQPTETNEKTISWLREAGIGSINVDLIYGLPHQTEDGFKETLEEVLA 241

Query: 197 YAVDHLSLY 205
           Y  + L+++
Sbjct: 242 YDPERLAVF 250


>gi|312621841|ref|YP_004023454.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202308|gb|ADQ45635.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 471

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 109/245 (44%), Gaps = 13/245 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRS--IS 72
           +S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++   Q        I 
Sbjct: 154 SSACLYIGIPICPTKCLYCSFSCHEMTRQIKSLLGMYTDSIICELEKTYQKIDENKNRIV 213

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN- 131
           +I+FGGG+P+++  +NI  I   +  N   +   EIT EA        +   Y  A +N 
Sbjct: 214 AIYFGGGSPAVLGIENIKKIFTNLFDNLEKNCIQEITFEAGRPDTISEDLLEYL-AELNR 272

Query: 132 ----RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
               R+ +  Q+  + +L+ +GRNH   +   A  L +   F  ++ D+I  LP +    
Sbjct: 273 YLNIRLCINPQTSNDNTLKIIGRNHTFEDIKKAFALTQEYGFNNINSDVILGLPGENEND 332

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  +   L  +   ++++ L+I++ +L     K  +     E    +L + TQ +   H
Sbjct: 333 YKKTIDDVLKLSPASITVHTLSIKRASLL--RFKWNEYKFMDEETVNNLLDWTQYVLEEH 390

Query: 247 GLHAY 251
           G   Y
Sbjct: 391 GYIPY 395


>gi|255323188|ref|ZP_05364323.1| radical SAM domain protein [Campylobacter showae RM3277]
 gi|255299711|gb|EET78993.1| radical SAM domain protein [Campylobacter showae RM3277]
          Length = 454

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 44/282 (15%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFGGG 79
           +Y H PFC   CPYC F+    +Y   QE     F    + MRQ+       SS++ GGG
Sbjct: 48  LYAHVPFCHTFCPYCSFH----KYHYEQELAKIYFENLREEMRQVKEAGFDFSSLYVGGG 103

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLG 136
           T  + EP+ +   L    + +++    +++ E++P+ +    +  F G     ++R+S+G
Sbjct: 104 TTLINEPE-LEKTLKLAKELFSIE---DVSAESDPNHISPESLTRFDGL----IDRLSVG 155

Query: 137 VQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           VQS + ++L+ +GR     +A E    +  A    P +S DLI+ LP QT  Q   ++  
Sbjct: 156 VQSFDNETLKRVGRYEKFGSAEETKRKLEKALGKIPVISLDLIFNLPNQTKEQLINDINV 215

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL--------YNLTQSITSA 245
           A S +   ++ Y L   +              L  EN+A  L            + I S 
Sbjct: 216 AKSISPQQITFYPLMKSE--------------LTRENIARSLGVSNVDNEREFYEIIVSE 261

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYG---DYIGIGPGAHS 284
                Y  SN      E    L     G   +Y+G+G GA S
Sbjct: 262 FAKSGYRQSNAWAFSNEKSAGLRDEYVGSNLEYVGVGSGAFS 303


>gi|51893563|ref|YP_076254.1| coproporphyrinogen III oxidase [Symbiobacterium thermophilum IAM
           14863]
 gi|51857252|dbj|BAD41410.1| putative Fe-S oxidoreductase [Symbiobacterium thermophilum IAM
           14863]
          Length = 526

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 31/299 (10%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEM----QWMRQLTG 67
           G+   ++ +Y+  PFC   C +C F+ + + +++     F+++   EM    Q +R L G
Sbjct: 187 GRDPRAVSLYIGIPFCPSICSFCSFSIYPINQHRDQISPFLEALGREMAIIGQAIRDL-G 245

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEAN-PSSVEVNNFQGY 125
            R + SI+FGGGTP+    ++ A +L   A+      S  E TIE   P +         
Sbjct: 246 LR-VESIYFGGGTPTSPRDEDFAWMLRTAAETLLKGQSPAEYTIEGGRPETFNRYKLDVM 304

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP---RMSFDLIYALPKQ 182
              GV R+S+  Q+  + +L  LGR H   +   A  L R+  P    ++ D+I  LP +
Sbjct: 305 AAHGVTRVSVNPQTTVQATLMHLGRIHTVEKFYRAYDLVRS-HPAGFTVNTDIIIGLPGE 363

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL---VLPSENVAVDLYNLT 239
              +    L+     A D+L+++ L +++G+  +     G++   + P+E  A  L    
Sbjct: 364 GPAEVHHTLEDMRRLAPDNLTVHTLAVKRGSRIHAAGAAGEVLRALTPAEAEA--LVQDA 421

Query: 240 QSITSAHGLHAYEISNHSFL------------GAESLHNLNYW-RYGDYIGIGPGAHSR 285
                A G   Y +    F+            G ESL+N+         IG+G GA S+
Sbjct: 422 AETARAMGQRPYYLYRQKFMVGSLENVGYALPGKESLYNIQMMEERQTVIGLGGGATSK 480


>gi|71066680|ref|YP_265407.1| coproporphyrinogen III oxidase [Psychrobacter arcticus 273-4]
 gi|71039665|gb|AAZ19973.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter arcticus
           273-4]
          Length = 514

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 11/237 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------IS 72
           L +Y H PFC   C YC  N  + +      +++   + E++    L  P        + 
Sbjct: 94  LSLYFHIPFCRHLCYYCACNKIITKKNSDAGDYLAYLIAEIKHKCSLLTPPENGKKPLVK 153

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +  GGGTP+ ++   +  + + +   +        + +IE +P  +     +  R  G 
Sbjct: 154 QLHLGGGTPTFLQDNELIELWEFLQTQFEFLPEDQGDYSIEIDPRELSGETLKVLRHLGF 213

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRISLGVQ L+E     + R H+A      +  AR + F  ++ DLIY LP Q     + 
Sbjct: 214 NRISLGVQDLDETVQVAVNRVHSAKLIENVLLEARALGFHSINVDLIYGLPHQMPETLDK 273

Query: 190 ELQRALSYAVDHLSLYQLT-IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++R +  + D LS++    + +     +  K+ DL  P+  + + L N   ++T A
Sbjct: 274 TVRRIIEMSPDRLSVFNYAHLPERFKSQRQIKEADLPTPAAKLTM-LGNTINTLTEA 329


>gi|197293341|gb|ACH58233.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus sp.
           CCUG 30218]
          Length = 189

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 1/138 (0%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++ I +GGGTP+ +     A ++  + K++TVS   EI+IE +P  +E++     R  
Sbjct: 11  RLVTQIHWGGGTPTYLSEIQSARLMAMLKKHFTVSETAEISIEIDPRRIELSMLDHLRHI 70

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S+GVQ   +   + + R  +       +  AR + F   + DLIY LP QT+  +
Sbjct: 71  GFNRMSMGVQDFNKDVQKAVNREQDEDFIHTLLDHARELGFQSTNLDLIYGLPLQTVESF 130

Query: 188 EMELQRALSYAVDHLSLY 205
              L++ ++   D LS++
Sbjct: 131 MFTLEKVIALNPDRLSVF 148


>gi|20803847|emb|CAD31425.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE PROTEIN
           [Mesorhizobium loti R7A]
          Length = 449

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 104/195 (53%), Gaps = 4/195 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           +  + + +Y+H P+C + C +C  ++   RRY+    ++++S   E+  +  L G ++ +
Sbjct: 42  ESGDEVSLYLHIPYCDRLCWFCACHTKQTRRYEP-VASYLRSLHAEIATVAGLVGSKAHV 100

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++ FGGG+P++++P+++  +   +  ++   ++ +I++E  P+ ++        + G+ 
Sbjct: 101 RAVHFGGGSPTMLKPEDMIALGTVLRDSFDFLADAKISVEIEPNDMDEARLDTLAEIGMA 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R S+GVQ  + +  + + R  +  +  A +   R+     ++ DL+Y LP QT       
Sbjct: 161 RASVGVQDFDPKVQKAINREQSFLQTKAVVDGIRSRGVGSVNLDLLYGLPHQTRESVCST 220

Query: 191 LQRALSYAVDHLSLY 205
           + +AL+   D ++L+
Sbjct: 221 VAQALTLEPDRMALF 235


>gi|325479804|gb|EGC82891.1| coproporphyrinogen dehydrogenase HemZ [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 431

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 106/216 (49%), Gaps = 11/216 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
              +Y++ PFC  +C YC + + V   +  +  +I S + E++    ++ PR + +I+ G
Sbjct: 124 DFSLYINIPFCPSRCHYCSYPTIVGP-REDRSKYIDSLIYEIE---NISLPRKLDAIYIG 179

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPS I+  ++  +L  I + ++     E T EA    +++ +  +  R+ GV RISL 
Sbjct: 180 GGTPSYIKTDDLRRLLLAINEKFSYK---EFTFEAGREDTLDFDKLKLLRENGVGRISLN 236

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            QS  E  ++  GR ++    +    +AR++   ++ D I  L  +    ++        
Sbjct: 237 PQSFNEDIVKRAGRAYDFDHFLDIFKMARDLGFIINTDFIIGLMGEKADDFKKNFFILED 296

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDG---DLVLPSE 229
              D+++ + L I+  + +++ +      D++L SE
Sbjct: 297 LMPDNITFHTLAIKVSSKYFEKNAKASRKDVILISE 332


>gi|153002617|ref|YP_001368298.1| coproporphyrinogen III oxidase [Shewanella baltica OS185]
 gi|151367235|gb|ABS10235.1| Coproporphyrinogen dehydrogenase [Shewanella baltica OS185]
          Length = 445

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 27/341 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+    L +     +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +F G       + +   Y +Y+G+G G+ S +    +    S+ K+ E         GH 
Sbjct: 288 AF-GKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQERIAA-----GHM 341

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            VE++   S++   ++  +       +S K +    G NLD
Sbjct: 342 GVEQQKNYSKKDVMQYRFLLGMFSGRLSRKYFRETFGVNLD 382


>gi|225181025|ref|ZP_03734472.1| Coproporphyrinogen dehydrogenase [Dethiobacter alkaliphilus AHT 1]
 gi|225168222|gb|EEG77026.1| Coproporphyrinogen dehydrogenase [Dethiobacter alkaliphilus AHT 1]
          Length = 386

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 109/218 (50%), Gaps = 6/218 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFG 77
           VYV  PFC  +C YC F SH ++     +  F+ + L E++   ++     ++  +++ G
Sbjct: 71  VYVGIPFCPTRCLYCSFPSHSLKELGKLRGQFVDTLLWEIEETAKMAAKYKLNPYTVYVG 130

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN-NFQGYRKAGVNRISLG 136
           GGTP+ + P ++  +L  + + +      E T+EA  +    + +        V+R+S+ 
Sbjct: 131 GGTPTALSPTDLKRVLSALREAFPGVLR-EFTVEAGRADTLTDEHLAVLSHHQVSRVSVN 189

Query: 137 VQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            Q++  ++L  +GR H+A +   AA  + +   P ++ DLI  LP +        +++ +
Sbjct: 190 PQTMHGKTLELIGRCHSAEDVDRAARKVKQAKIPVLNMDLIVGLPGEDALMVRESMEQIM 249

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           + A ++++L+  + ++ + F +  +   L   +E  A+
Sbjct: 250 ALAPENITLHVFSPKRASRFSEDRRQFTLPADAEVAAI 287


>gi|217971430|ref|YP_002356181.1| coproporphyrinogen III oxidase [Shewanella baltica OS223]
 gi|217496565|gb|ACK44758.1| Coproporphyrinogen dehydrogenase [Shewanella baltica OS223]
          Length = 445

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 27/341 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+    L +     +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +F G       + +   Y +Y+G+G G+ S +    +    S+ K+ E         GH 
Sbjct: 288 AF-GKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQERI-----AAGHM 341

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            VE++   S++   ++  +       +S K +    G NLD
Sbjct: 342 GVEQQKNYSKKDVMQYRFLLGMFSGRLSRKYFRETFGVNLD 382


>gi|283955163|ref|ZP_06372665.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793376|gb|EFC32143.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 448

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 11/199 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T +   S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        
Sbjct: 36  TPKQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDF 92

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S++ GGGT +LI  + +   L+   K + +    EI+ E++P+ ++ +    + K  ++
Sbjct: 93  NSMYVGGGT-TLINEEELLKTLELCKKLFNIE---EISCESDPNHIDPSKLSMF-KGIID 147

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q  
Sbjct: 148 RLSCGIQSFDDETLKKIARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLL 207

Query: 189 MELQRALSYAVDHLSLYQL 207
            +L+ A + A   ++ Y L
Sbjct: 208 NDLEIAKNLAPQQITTYPL 226


>gi|118589377|ref|ZP_01546783.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
 gi|118438077|gb|EAV44712.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
          Length = 457

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL---TGPRSISS 73
           +SL +Y+H P+C + C YC  ++   R     + +  +   E+  + +    TGP  +  
Sbjct: 45  DSLSLYLHVPYCRELCHYCGCHTKATRQDAPLKAYAATLGQEINLVAEHMPHTGP--VRH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           I +GGGTPSL+ P+   + L G+ + ++ ++ ++E  IE +P  V     +     GVNR
Sbjct: 103 IHWGGGTPSLL-PRESLIDLTGLMRVSFDLAPDLEHAIELDPRLVTEQLAETLAIIGVNR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQ  +    + +GR         A+  LA      ++FDL+Y LP Q+       +
Sbjct: 162 ASLGVQDFDPNVQKAIGRMQPYRVVKQAVEFLAEAGVTALNFDLMYGLPGQSPETILDTV 221

Query: 192 QRALSYAVDHLSLY 205
           ++ LS     ++L+
Sbjct: 222 EKTLSLYPGRIALF 235


>gi|126172473|ref|YP_001048622.1| coproporphyrinogen III oxidase [Shewanella baltica OS155]
 gi|160877341|ref|YP_001556657.1| coproporphyrinogen III oxidase [Shewanella baltica OS195]
 gi|125995678|gb|ABN59753.1| Radical SAM domain protein [Shewanella baltica OS155]
 gi|160862863|gb|ABX51397.1| Coproporphyrinogen dehydrogenase [Shewanella baltica OS195]
 gi|315269545|gb|ADT96398.1| Radical SAM domain protein [Shewanella baltica OS678]
          Length = 445

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 27/341 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+    L +     +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +F G       + +   Y +Y+G+G G+ S +    +    S+ K+ E         GH 
Sbjct: 288 AF-GKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQERI-----AAGHM 341

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            VE++   S++   ++  +       +S K +    G NLD
Sbjct: 342 GVEQQKNYSKKDVMQYRFLLGMFSGRLSRKYFRDTFGVNLD 382


>gi|295106363|emb|CBL03906.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 430

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 17/193 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC + CPYC FN    R+   ++    +  S   EM  +++L       S++ G
Sbjct: 35  LYMHVPFCERLCPYCSFN----RFPFAEDRARPYFASMRKEMMMLKELG--YDFESLYVG 88

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++    I  + D I       S  E++ E NP+ + +  +    +  V R+S+GV
Sbjct: 89  GGTPTIM----IDELCDTIDLAKETFSIAEVSSETNPNHL-IPAYLDKLQGRVQRLSVGV 143

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++  L+ + R     + +E +  I  A   F  ++ D+I+  P QT      +++R 
Sbjct: 144 QSFDDGLLKQMDRYDKYGSGAEILERIGEASPYFTSLNVDMIFNFPAQTEDILINDIERV 203

Query: 195 LSYAVDHLSLYQL 207
           +       + Y L
Sbjct: 204 VESGTSQTTFYPL 216


>gi|302533083|ref|ZP_07285425.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
 gi|302441978|gb|EFL13794.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
          Length = 460

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 18/215 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--------GP 68
           ++L +Y H PFC  +C +C+  +         E    +FL  ++   ++T         P
Sbjct: 52  DALSLYAHIPFCEMRCGFCNLFTRT----GAPEEVTGAFLATLERQARVTREALEAKGEP 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGY 125
              +   FGGGTP+ +    +  + D I++N  + ++++    ++E +P++   +     
Sbjct: 108 IRFTLAAFGGGTPTYLTADELTRLCD-ISEN-IMGADLKAASWSVETSPATATADRIAVL 165

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            + G  R+S+GVQS  ++  R   R    +E  A++  L    FP ++ DLIY +  QT 
Sbjct: 166 AERGATRLSIGVQSFVDEEARAAVRPQKRAEVEASLARLKEARFPILNIDLIYGIDGQTE 225

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             + + L  AL++  + + LY L +   T     H
Sbjct: 226 RTFRVSLDAALAWEPEEIYLYPLYVRPLTGLSTRH 260


>gi|24375997|ref|NP_720040.1| coproporphyrinogen III oxidase [Shewanella oneidensis MR-1]
 gi|24350998|gb|AAN57484.1|AE015884_6 oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella oneidensis MR-1]
          Length = 445

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 20/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLEKFGTGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E
Sbjct: 288 AFGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE 334


>gi|88798376|ref|ZP_01113961.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
 gi|88778816|gb|EAR10006.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
          Length = 413

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 25/200 (12%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ-----SFLTEMQWMRQLTGPRSI 71
             + +Y+H PFC   C YC F+  +    + +  F       + + E  W         +
Sbjct: 37  TPVALYLHIPFCESLCTYCSFHRQLLDPALAKAYFQALRQQITAVAEAGW--------QV 88

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S ++ GGGTP+++ PQ +A  L  + +++ +   V I++E NP+ +  +  +      V+
Sbjct: 89  SQVYIGGGTPTVL-PQELASTLSLLTEHFGL---VPISVETNPNHLTTDVIEMLSARDVS 144

Query: 132 RISLGVQSLEEQSLRFLGRN--HNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S+GVQS ++  L+ + R   +  SEAI   +      FP ++ DLI+ LP Q+    E
Sbjct: 145 RLSIGVQSFDDDLLQKMNRRLAYGDSEAIQERLAWVNRRFPTVNVDLIFNLPGQS----E 200

Query: 189 MELQRALSYAVDHLSLYQLT 208
             L+R L+  V+ L L Q++
Sbjct: 201 RSLRRDLA-IVNALQLSQVS 219


>gi|260461753|ref|ZP_05809999.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|319785302|ref|YP_004144778.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|259032394|gb|EEW33659.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|317171190|gb|ADV14728.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 451

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 2/172 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
             + + +Y+H PFC   C YC F + + R +    +++     E++ +  Q+     ++ 
Sbjct: 44  ADDPVSLYLHIPFCRSICWYCGFPTTIARNQGPILDYLAVLRDEIRLVWEQVQQGLVVND 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP+LI       ++  + + +    +  I +E +P +      +    A V+R 
Sbjct: 104 VHFGGGTPTLIGAAEFLAMIQLLRRRFAFRESATIAVEIDPRTFTAEIAEAMGAANVSRA 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
           SLGVQS +    + + R  + ++  AA+  L R+    ++ DLI+ LP QT+
Sbjct: 164 SLGVQSFDPIVQKAINRVQSEAQTAAAVEELRRHGVSGINVDLIFGLPNQTV 215


>gi|110678592|ref|YP_681599.1| coproporphyrinogen III oxidase [Roseobacter denitrificans OCh 114]
 gi|109454708|gb|ABG30913.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter
           denitrificans OCh 114]
          Length = 451

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC + C +C   +           ++ +   E+  +  +  P  S+S + +G
Sbjct: 51  ISLYLHIPFCRRLCWFCACRTQGISNNGPVAAYLSTLKAELSMLAAILPPDISLSRVHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L E   I  +   I     ++ N E ++E +P+ ++ +       AG+ R S+GV
Sbjct: 111 GGTPTLFEAGMIEELAGAINDLAPMAPNGEFSVEVDPNEIDQSRVDALAAAGMTRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNAS-EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +    +GR  +      AA  L  +    ++ D+++ LP QT  +    +Q+ L+
Sbjct: 171 QDFDVEIQTTIGRLQSFDVTRFAADMLRASGVHSLNTDILFGLPHQTTEKIAASVQKLLT 230

Query: 197 YAVDHLSLY 205
            + D ++LY
Sbjct: 231 LSPDRVALY 239


>gi|120597231|ref|YP_961805.1| coproporphyrinogen III oxidase [Shewanella sp. W3-18-1]
 gi|120557324|gb|ABM23251.1| Radical SAM domain protein [Shewanella sp. W3-18-1]
          Length = 445

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 20/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKSLG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+    L +     +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E
Sbjct: 288 AFGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE 334


>gi|78776805|ref|YP_393120.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM
           1251]
 gi|78497345|gb|ABB43885.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Sulfurimonas denitrificans DSM 1251]
          Length = 455

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
             S  L +Y H PFC   C +C  N      +     +++    E++ +       RS+ 
Sbjct: 43  DSSRPLSLYFHLPFCKNACYFCGCNVVFTSKEDKMLRYLEYLKRELKILSSFVDCNRSVI 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I   +       EI+ E +P  ++ +  +   + G N
Sbjct: 103 QMHFGGGTPTFFSAEQLDEVIKEIRHFFPNFVKEAEISCEIDPRHIDEDQMRVLSQNGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S G+Q   E+    + R         A+ LAR      ++ DLIY LP QT+  ++  
Sbjct: 163 RVSFGIQDFNEKVQIAVHRVQPYEITKYAMDLARKYNMHSVNVDLIYGLPFQTLETFKET 222

Query: 191 LQRALSYAVDHLSLY 205
           L R+L+   D  +++
Sbjct: 223 LARSLTLNADRYAVF 237


>gi|114561264|ref|YP_748777.1| coproporphyrinogen III oxidase [Shewanella frigidimarina NCIMB 400]
 gi|114332557|gb|ABI69939.1| Radical SAM domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 445

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 30/290 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + R    +E F+ +   EMQ  + L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSFCTFHRFLFREDKAREYFV-ALRKEMQMAKDLG--YEFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-----EITIEANPSSVEVNNFQGYRKAGVNRISL 135
            +++E        D +A+    + N+     E++ E++P  +    F+   K  V+R+S+
Sbjct: 120 TTVLE--------DELARTIEHAKNLFPGIKEVSCESDPQHLASPEFKQL-KGLVDRMSI 170

Query: 136 GVQSLEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           GVQS ++  L+    L +  +  +    I  A+ +FP ++ DLI+    QT    + +L+
Sbjct: 171 GVQSFDDGILKMTDRLDKFGSGQQTFDRIMAAKELFPIINVDLIFGFRGQTDEIIQSDLE 230

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A       ++ Y L I   T   +    G L  P  ++      +   +T  +     +
Sbjct: 231 MASKLDPRQITTYPLMITHQT---RKSVKGQLAAPHGDMVNQYRQILNHLTGQYT----Q 283

Query: 253 ISNHSFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +S  +F G  +    + +   Y +Y+G+G G+ S +    +    S++K+
Sbjct: 284 LSAWAF-GKTNDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLKKY 332


>gi|146294590|ref|YP_001185014.1| coproporphyrinogen III oxidase [Shewanella putrefaciens CN-32]
 gi|145566280|gb|ABP77215.1| Radical SAM domain protein [Shewanella putrefaciens CN-32]
 gi|319424778|gb|ADV52852.1| Radical SAM domain protein [Shewanella putrefaciens 200]
          Length = 445

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 20/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+    L +     +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E
Sbjct: 288 AFGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE 334


>gi|306842080|ref|ZP_07474752.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
 gi|306287830|gb|EFM59253.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
          Length = 374

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 2/159 (1%)

Query: 49  ENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ENF+ + L E++ +   LT    ++ + +GGGTPS++       +L  I   +     +E
Sbjct: 7   ENFVNALLGEIRMVSASLTARPRVAHLHWGGGTPSILNAGQFQAVLAAIRTAFDFDPLME 66

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             IE +P +V     +   + GVNR SLGVQ ++ +    +GR         A  L R +
Sbjct: 67  HAIELDPRTVTPLLVKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREV 126

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
              R++FDLIY LP QT+       +R ++ + D ++ Y
Sbjct: 127 GINRINFDLIYGLPLQTVETLRETCERVVTLSPDRVACY 165


>gi|261324774|ref|ZP_05963971.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           neotomae 5K33]
 gi|261300754|gb|EEY04251.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           neotomae 5K33]
          Length = 385

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 49  ENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ENF+ + L E++ +   LT    ++ + +GGGTPS++       +L  I   +    ++E
Sbjct: 18  ENFVNALLGEIRTVSASLTARPRVAHLHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSME 77

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             IE +P +V     +   + GVNR SLGVQ ++ +    +GR         A  L R +
Sbjct: 78  HAIELDPRTVTPLLAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREV 137

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
              R++FDLIY LP QT+       +R ++ + D ++ Y
Sbjct: 138 GINRINFDLIYGLPLQTVETLRETCERVVTLSPDRVACY 176


>gi|163734083|ref|ZP_02141524.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
 gi|161392619|gb|EDQ16947.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
          Length = 449

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             + +Y+H P+C + C YC  N  + +       + Q+   E+  + Q    R  IS + 
Sbjct: 45  KPVSLYLHVPYCRELCWYCGCNMKLAKKDAPVAQYAQTLNREISLLAQHLPERMKISHLH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P ++   +D +  ++  +++ E+ IE++P ++         + G  R S 
Sbjct: 105 WGGGTPTALVPDDLERAMDAVHASFDFTADAELAIESDPRTLTDEMILRIGQLGFTRASF 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +  + + R         ++   R      ++FDLIY LP QT+      ++  
Sbjct: 165 GVQEFDPKVQKAINRIQPPDMVRHSVDGLRAAGVSGINFDLIYGLPHQTVDTLLETIRLC 224

Query: 195 LSYAVDHLSLY 205
           +    D ++L+
Sbjct: 225 VEMQPDRIALF 235


>gi|315924955|ref|ZP_07921172.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621854|gb|EFV01818.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 431

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 14/222 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSIS 72
           +G++++ +YVH+PFC  KC +C F+   + Y +   N +++  + E+++        SI+
Sbjct: 40  RGADTM-LYVHFPFCDSKCRFCGFD---KEYNLDAINGYVEKVIAELEYYAPYG--FSIN 93

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAGVN 131
           +I FGGG+PSLI P  +A IL  I KN+ +  N  I +E + +S+       +     + 
Sbjct: 94  NIHFGGGSPSLIPPFLLARILAVIRKNYDMLPNAAINMEGSSTSLYQPEMIAFLLDENIT 153

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP----KQTMTQW 187
           R+S GVQ+       F        E    +   R     +  D++Y  P    ++T  Q 
Sbjct: 154 RVSTGVQTFYRPLRDFFEIEATLEEVYLTLETLRKNNINVFVDILYGYPDYGFERTPKQI 213

Query: 188 -EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            E +L+ A+   V  +    L   K  L   + KDG + LPS
Sbjct: 214 VERDLKTAMRLDVGGIDYSHLYPMKNKLEPSI-KDGAVQLPS 254


>gi|310814966|ref|YP_003962930.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
 gi|308753701|gb|ADO41630.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
          Length = 449

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S  + +YVH P+C + C +C  ++H          ++   L E+  +     P   ++S+
Sbjct: 46  SGHIAIYVHIPYCRRLCWFCADHTHGLMTDRPLRRYLDHILAELALIAGYLPPDVRVASV 105

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+++  + ++ +   +      +    I++E +P++V+        + G+NR +
Sbjct: 106 HLGGGTPTILSAEMLSELGQALRDFRPFTRTARISVEIDPAAVDDARLDALAQIGMNRAA 165

Query: 135 LGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +GVQ  + +     GR        +A+A +  AR +   ++ D++Y LP QT       +
Sbjct: 166 IGVQGFDPRVQTVTGRVQPFAVTRKAVAGLR-ARGVG-CVTMDVLYGLPYQTPDSMTQTI 223

Query: 192 QRALSYAVDHLSLY 205
           ++ +    D L+L+
Sbjct: 224 EKVMDIRPDRLALF 237


>gi|303256260|ref|ZP_07342276.1| radical SAM domain protein [Burkholderiales bacterium 1_1_47]
 gi|330998955|ref|ZP_08322680.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|302860989|gb|EFL84064.1| radical SAM domain protein [Burkholderiales bacterium 1_1_47]
 gi|329575697|gb|EGG57223.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 448

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 51/306 (16%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +E F+ +   EM+ +R +      +S++ GGGT
Sbjct: 67  LYAHIPFCKTLCSYCTFHRFLFKEHKAREYFV-NLRKEMEAVRAMG--YDFTSMYVGGGT 123

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-----EITIEANPSSV---EVNNFQGYRKAGVNR 132
            +        +++D +AK   ++  +     E+++E +P  +   +++  +G     V+R
Sbjct: 124 TT--------VLMDELAKTLELAKKLFPSIKEVSVETDPQIMGDPQIHMLEGL----VDR 171

Query: 133 ISLGVQSLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +S+GVQS ++  L+   R+      E    I  A+ +FP  + D+I+    QT      +
Sbjct: 172 MSIGVQSFDDGILKMTERDKFGTGQEVFENIAKAQELFPICNVDMIFGFRGQTDEILHRD 231

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG-----DLVLPSENVAVDLYNLTQSITSA 245
           L+  L  +   ++ Y L +   T   +  KD      D++     + +D+     +  SA
Sbjct: 232 LETLLKLSPRQITTYPLMVTSQT--KRSVKDSIAAPHDIMAGQYRMILDMLTEDYTQLSA 289

Query: 246 --------HGLHAYEISNHSFLGAES-----------LHNLNYWRYGDYIGIGPGAHSRV 286
                    G   Y I N  +LG  S           ++  +  RY + IG G     R 
Sbjct: 290 WAFGKSNNEGFDEYVIDNDEYLGVGSGAFSFLGDSLYVNTFSLRRYNERIGSGNNGVERR 349

Query: 287 KVGSHR 292
           KV   R
Sbjct: 350 KVFGKR 355


>gi|256060783|ref|ZP_05450945.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
          Length = 376

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 2/159 (1%)

Query: 49  ENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ENF+ + L E++ +   LT    ++ + +GGGTPS++       +L  I   +    ++E
Sbjct: 9   ENFVNALLGEIRTVSASLTARPRVAHLHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSME 68

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             IE +P +V     +   + GVNR SLGVQ ++ +    +GR         A  L R +
Sbjct: 69  HAIELDPRTVTPLLAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREV 128

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
              R++FDLIY LP QT+       +R ++ + D ++ Y
Sbjct: 129 GINRINFDLIYGLPLQTVETLRETCERVVTLSPDRVACY 167


>gi|109947404|ref|YP_664632.1| coproporphyrinogen III oxidase [Helicobacter acinonychis str.
           Sheeba]
 gi|109714625|emb|CAJ99633.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           acinonychis str. Sheeba]
          Length = 457

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 3/190 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ-SFLTEMQWMRQLTGPRSISSIFFG 77
           L +Y H PFC   C +C  +      +  +  +I           + +   R ++   +G
Sbjct: 53  LSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKKAMDTNREVAQFHYG 112

Query: 78  GGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+   P  +  I   I + +   S ++E++ E +P     N+ Q     G NR+S G
Sbjct: 113 GGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKNHMQTLFDRGFNRLSFG 172

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  + +  + + R         A+ LAR+     ++FDLIY LP QT   +   L+  L
Sbjct: 173 VQDFDFEVQKAIHRIQPFEMVQDAVKLARDYGIKSINFDLIYGLPNQTKESFLKTLEWVL 232

Query: 196 SYAVDHLSLY 205
               D L+++
Sbjct: 233 KLDPDRLAVF 242


>gi|302383200|ref|YP_003819023.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193828|gb|ADL01400.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 464

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 2/171 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISS 73
            + +  +YVH PFC   C YC  N+         ++++   + E +  +   G R  +S 
Sbjct: 58  AAEAASLYVHIPFCRTLCWYCACNTRAVNRAETIKSYVDLLIDEARLAQAALGRRQRVSR 117

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+++   ++  +  G+ + +      EI  E +PSS+     +   + G+NR 
Sbjct: 118 LHLGGGTPNMVAVDDLDRLFAGLRQAFAFGPEAEIAAELDPSSLTRTWVRAAARNGLNRA 177

Query: 134 SLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           SLGVQ L  +    + R    A+ A AA  L       ++ DL+Y LP QT
Sbjct: 178 SLGVQDLSPRVQHAINRFEPFATVARAADWLWDAGVGSLNLDLMYGLPLQT 228


>gi|282882040|ref|ZP_06290681.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           lacrimalis 315-B]
 gi|281298070|gb|EFA90525.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           lacrimalis 315-B]
          Length = 458

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  +C YC F++ V   ++     I++ L E+  ++     +   +I+ GGG
Sbjct: 150 SIYIHIPFCPSRCSYCSFDAMVIDEEIIDIY-IEALLKELSSLKNYYNKKP-KTIYIGGG 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGVNRISLGVQ 138
           TPS I  + +  I+D + K++  +   E T+E   +    ++  +  ++ GV+RIS+  Q
Sbjct: 208 TPSSIGWKRLEKIIDEVYKDYGFAD--EFTVECGRTDTFSSDLLRMLKEKGVDRISINPQ 265

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ +R L R++   +       ARN  F  ++ DLI  LP +        +++    
Sbjct: 266 SFNKEIIRNLNRDNTNFD--FWYEEARNHNFKSINMDLIVGLPGENRDSIINSIKKVNDL 323

Query: 198 AVDHLSLYQLTIEKGTLFY 216
             D+++++ L+++KG+  Y
Sbjct: 324 EPDNITIHTLSLKKGSRLY 342


>gi|163785544|ref|ZP_02180119.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
 gi|159879188|gb|EDP73117.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
          Length = 165

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 22/178 (12%)

Query: 221 DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGP 280
           D    LP E     ++ L  +   + G + YE+SN +  G +  HNL YW    ++GIG 
Sbjct: 4   DNKYNLPDEETTTQMFKLIDNYLESKGFYRYELSNWAKNGFKCKHNLFYWTDQYFLGIGV 63

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A S   +G+ R   +  K+   + +MV K    V  +E LS E    E +M+GLRL+EG
Sbjct: 64  SAWSY--IGNKRFGNT--KNLTEYFEMVYKGEKPVKFRETLSEEDSRFEKIMLGLRLKEG 119

Query: 341 ISV---KDWEMLAGRNLDIECERNLQRQGF--IERVQFSRLRCTQRGMTMLDSVIANL 393
           I V   K+ E+L          + L+++GF  I+  +FS    TQ G+ +++ +I  L
Sbjct: 120 IDVNFIKNKEIL----------KELEKEGFGIIKENKFS---LTQDGLMLINQIITKL 164


>gi|167567919|ref|ZP_02360835.1| hypothetical protein BoklE_35543 [Burkholderia oklahomensis EO147]
 gi|167573205|ref|ZP_02366079.1| hypothetical protein BoklC_25438 [Burkholderia oklahomensis C6786]
          Length = 480

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 9/178 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQ-WMRQLTG 67
           +G N   ++   P C   C +C F   +R++          N++   + E + W+  +  
Sbjct: 69  EGQNPYFLWATIPLCKYHCYFCQFPIVMRKHDAAAFREQARNWVDLNIAEARLWLALVPA 128

Query: 68  PRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            R   +      GGTP+L+  + +A +LD    N+  +++  I IE +P S+  +     
Sbjct: 129 LRDAPVGEFCLFGGTPTLLPDELLAELLDFYRSNFGFNADTTIRIEGSPDSLSSDKLALL 188

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQ 182
            K G  +I+ G+QS +++ +   GR H + EA A + H   + F R+  DLIY L  Q
Sbjct: 189 HKKGCRKITYGIQSFDDRLVALAGREHTSDEARAVVRHAFLSGFERVDGDLIYGLLDQ 246


>gi|89514554|gb|ABD75155.1| putative coproporphyrinogen III oxidase [Sinorhizobium saheli]
          Length = 153

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Q ++S+ +Y H PFC + C +C F   +       E ++ +   EM W       R+I +
Sbjct: 25  QIASSVDLYFHVPFCSQYCTFCHFAKEINPSPERVERYLAALQKEMSWSDAALNGRAIET 84

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAG 129
            FFGGGTPS +    +  + D     + +S + E+++E +PS  +    V+      + G
Sbjct: 85  AFFGGGTPSFLTNHQLKTLFDMTNTRFDLSKS-EVSVELHPSLAKQADAVDRVSTLLRGG 143

Query: 130 VNRISLGVQS 139
           VNR  LGVQ+
Sbjct: 144 VNRFVLGVQT 153


>gi|329577057|gb|EGG58530.1| coproporphyrinogen dehydrogenase domain protein [Enterococcus
           faecalis TX1467]
          Length = 184

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 10/181 (5%)

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +F    + G L LP E +   +++ T       G H YE+SN +  G ES HNL YW   
Sbjct: 1   MFMNWFRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFALTGKESQHNLAYWNND 60

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
            Y G G GA   +    ++    I    + +LK +R+N   +VE E L+   Q +E L +
Sbjct: 61  HYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVETEELTRLNQIEEELFL 116

Query: 334 GLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           GLR + GIS + ++      ++       +R ++ +  IE      LR T++G+ + ++V
Sbjct: 117 GLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIEEADI--LRLTKKGLFVGNNV 174

Query: 390 I 390
            
Sbjct: 175 F 175


>gi|295689289|ref|YP_003592982.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
 gi|295431192|gb|ADG10364.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
          Length = 459

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 2/189 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
           + +Y H PFC + C YC  N+ V + +     +++  + E+  +  +L G     ++  G
Sbjct: 58  VSLYAHIPFCDRLCWYCGCNTRVVKKQALISEYVERLVDELALVEARLPGRIKAGAVHLG 117

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++   ++  +   +   +  +  VEI+ E +P+ +  +  +     G+ R SLGV
Sbjct: 118 GGTPNMLSRDDLVRLFGALRHVFPFAPGVEISAELDPAVLTESWVKAAAFHGLTRASLGV 177

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q L       + R         A H  R      ++ DL+Y LPKQ        L + L+
Sbjct: 178 QDLAPHVQEAVNRVEPFEVVARATHWLRQAGVASINLDLMYGLPKQMTADVVATLDKVLT 237

Query: 197 YAVDHLSLY 205
              + ++L+
Sbjct: 238 LRPERIALF 246


>gi|126463114|ref|YP_001044228.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104778|gb|ABN77456.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 450

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/329 (20%), Positives = 133/329 (40%), Gaps = 29/329 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
            S+ +Y+H PFC + C +C   +           +  +  +E+  +R    P   ++ + 
Sbjct: 49  GSISLYLHVPFCRRLCWFCACRTQGTSSDAPVRAYAAALKSELALLRARLAPGVRLARMH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+L+ P  I  +   I       +  + ++E +P+ ++        +AG+ R+S+
Sbjct: 109 WGGGTPTLLPPTLIHELALAIRDAVPSDAETDFSVEIDPTEIDAARLDALFEAGMTRVSI 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    + +GR  +           R+   R +  D++Y LP QT       +Q+ 
Sbjct: 169 GVQDFDPLIQQSIGREQSFELTQRLTEDLRHRGLRGLDADILYGLPHQTAPGVADSIQKL 228

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-----VDLYNLTQSITSAHGLH 249
           LS + D +++       G           L++P+ ++      +DL+   +++    G  
Sbjct: 229 LSLSPDRVAVL------GYAHVPAVSRRQLMIPTASIPGPEERLDLFETARTLILWDGYQ 282

Query: 250 AYEISNHSFLGAESLH-------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISI 297
              + + +  G    H         ++  Y D      IG+G  A SR   G  + A S 
Sbjct: 283 QVGLDHFARAGDPLAHAHACGRLRRSFQGYTDDRAEVLIGLGASAISRFPQGFTQNAPST 342

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
             H    L+ +R    +      LS E +
Sbjct: 343 SDH----LRAIRSGRFSTARGHVLSDEDR 367


>gi|282878047|ref|ZP_06286855.1| coproporphyrinogen dehydrogenase [Prevotella buccalis ATCC 35310]
 gi|281299882|gb|EFA92243.1| coproporphyrinogen dehydrogenase [Prevotella buccalis ATCC 35310]
          Length = 456

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 6/186 (3%)

Query: 2   KYLSAYE--NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +YL+A +  N+ T Q   S   Y+H PFC   C YC  NS+     V   +++ +   E+
Sbjct: 32  EYLAAVDASNHQTRQPLVSF--YLHIPFCRHLCHYCGCNSYPMADDVVIGHYVDALHREI 89

Query: 60  QWM--RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
             +  R  T  R IS I +GGG+P+ +    +  + + +        N EI IE +P  +
Sbjct: 90  DLVAARIDTATRKISQIHYGGGSPTALPIHYLQELNEHLLSLMPAIENPEIAIECHPGYL 149

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
             +N++   + G  R SLGVQ  + + L+ + R          + L R     ++ DL++
Sbjct: 150 TASNWEELGRCGFTRYSLGVQDFDLRVLKAVNRRPPLMPISEIMELLRAQGATINMDLLF 209

Query: 178 ALPKQT 183
            LP QT
Sbjct: 210 GLPLQT 215


>gi|302872385|ref|YP_003841021.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302575244|gb|ADL43035.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 488

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 11/252 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQ 64
           N ++    +S  +Y+  P C  +C YC F+ H   R+ K     +  S + E++  + + 
Sbjct: 163 NILSKLEPSSACLYIGIPICPTRCLYCSFSCHEMTRQVKSLIGMYTDSLICELEKTYQKI 222

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +++FGGG P++I  +NI  I   + +N       EIT EA  P +++    Q
Sbjct: 223 EENKNRIVAVYFGGGCPAVIGIENIKKIFTSLFENLEKDHIREITFEAGRPDTIDEELLQ 282

Query: 124 GYRKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
              +   +   R  +  Q+  + +L+ +GRNH   +   A   A    F  ++ D+I  L
Sbjct: 283 YLVEINQDLNVRFCINPQTSNDNTLKIIGRNHTFEDIKRAFAQAYEYGFKNINSDVILGL 342

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    +   ++  L  +   ++++ L+I++ +L  +   D    +  E V  +L + T
Sbjct: 343 PGEDENDYRKTIEDVLKLSPASITIHTLSIKRASLL-RFRWDEYKFMNEETVN-ELLDWT 400

Query: 240 QSITSAHGLHAY 251
           QSI    G   Y
Sbjct: 401 QSILEERGYVPY 412


>gi|309785707|ref|ZP_07680338.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
 gi|308926827|gb|EFP72303.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
          Length = 201

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 4/165 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + +   EM+    L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G PS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GMPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQ 182
           S   +  + + R  +   AI  +  L +     +  DL++ LP Q
Sbjct: 153 SFNSKIRKKMARTSDGPTAITFMESLVKRDRATVVCDLLFGLPGQ 197


>gi|307325397|ref|ZP_07604599.1| Coproporphyrinogen dehydrogenase [Streptomyces violaceusniger Tu
           4113]
 gi|306888866|gb|EFN19850.1| Coproporphyrinogen dehydrogenase [Streptomyces violaceusniger Tu
           4113]
          Length = 458

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 15/206 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----- 71
           ++L +Y+H PFC  +C +C+  + +       E  + ++L  ++  RQ    R       
Sbjct: 45  DALSLYLHIPFCEVRCGFCNLFTRI----GAPEGLVTAYLDALE--RQAGAVREALGEDA 98

Query: 72  --SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKA 128
             ++  FGGGTP+ +E   +  + D   K      + V +++EA+P++   +        
Sbjct: 99  RFAAAAFGGGTPTFLEAAELERLCDIAEKGMGADLAAVPLSVEASPATATADRLAVLAGR 158

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLGVQS  +   R   R    ++  AA+   R+   P ++ DLIY +  QT   W
Sbjct: 159 GTTRLSLGVQSFVDAEARSAVRPQRRADVEAALGRIRDAGIPVLNIDLIYGIDGQTEDSW 218

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
              L  AL++  + L LY L +   T
Sbjct: 219 RRSLDAALAWRPEELYLYPLYVRPLT 244


>gi|297563032|ref|YP_003682006.1| coproporphyrinogen dehydrogenase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847480|gb|ADH69500.1| Coproporphyrinogen dehydrogenase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 448

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 15/206 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----LTG 67
           G+   +L +Y H PFC  +C +C  N   R     ++  + ++L  ++   +     L  
Sbjct: 46  GEDVGALSLYAHIPFCEMRCGFC--NLFTRSTPPAEQ--VTAYLDALERQAEAVAGALPE 101

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYR 126
             + +    GGGTP+ +  + +  + D     + V  S + +++E +P++   +      
Sbjct: 102 GAAFARAALGGGTPTYLTAEELTRVYDLTESAFGVDLSAIPVSVETSPATATPDRLAVLD 161

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQT 183
             G  RIS+GVQS  +      GR    +E   A+AAI    +    ++ DLIY + +Q 
Sbjct: 162 ARGATRISMGVQSFLDAEAHAAGRPQKRAEVDRALAAIR--EHASADLNLDLIYGIDRQD 219

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTI 209
              W   L  AL +  + + LY L +
Sbjct: 220 ARTWAYSLDTALEWEPEEVYLYPLYV 245


>gi|283955787|ref|ZP_06373278.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792742|gb|EFC31520.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 448

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 11/193 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           S  +Y H PFC   CPYC F+ +     + +  F Q+   E++ M+        +S++ G
Sbjct: 42  SYMLYAHVPFCHTFCPYCSFHKYYYDENLAKVYF-QNLREEIKIMKD--KGFDFTSMYVG 98

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT +LI  + +   L+   K + +    EI+ E++P+ ++ N    + K  ++R+S G+
Sbjct: 99  GGT-TLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLFMF-KGIIDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +L  A
Sbjct: 154 QSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLGIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|261820811|ref|YP_003258917.1| coproporphyrinogen dehydrogenase [Pectobacterium wasabiae WPP163]
 gi|261604824|gb|ACX87310.1| Coproporphyrinogen dehydrogenase [Pectobacterium wasabiae WPP163]
          Length = 481

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 97/205 (47%), Gaps = 10/205 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE------MQWMRQLT--G 67
           +  + ++ + P C  +C +C F + +   K      +   + +        W++ +    
Sbjct: 70  AKQIHLWAYIPTCRYRCHFCQFPTVLLNPKAASAEAVFRDIVDYNIKEATMWLQNIPSLA 129

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              +      GGTPSL+    +  ++D    ++  S+   +  E  P ++  N  Q  ++
Sbjct: 130 QAEVGEFNIFGGTPSLLPAPELRRLMDFYQSHFNFSA-ASMRFEGEPGTLTKNYLQLLKE 188

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G ++IS G QS  +Q +   GR H+A E I  ++ AR++ F  +S DLIY +  Q +  
Sbjct: 189 LGFSKISFGAQSFNDQIIHACGRQHSAQECIETLYNARDVGFNWVSMDLIYGMLGQRVDD 248

Query: 187 WEMELQRALSYAVDHLSLYQLTIEK 211
            + ++++AL  A+ H+   +L +E+
Sbjct: 249 VKYDMEKALELALSHVVCTKLHMEE 273


>gi|307721469|ref|YP_003892609.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979562|gb|ADN09597.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 456

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 3/197 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRS 70
           T   S  L +Y H PFC   C +C  N      +     ++     E++ + + L   R 
Sbjct: 42  TQDSSRPLSLYFHLPFCKNACYFCGCNVVFTSKEDKMIRYMDYLKRELKILSKHLDMNRE 101

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  + FGGGTP+      +  I+  I   +     + EI+ E +P  +  +  +   + G
Sbjct: 102 VIQMHFGGGTPTFFSAAQLDEIISEIKSYFPNFVPDAEISCEIDPRHINEDQMKVMSEHG 161

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S G+Q   E+    + R    +    A+ LAR      ++ DLIY LP QT+  ++
Sbjct: 162 FNRVSFGLQDFNEKVQIAVHRVQPYNITKDAMDLARKYNMHSVNVDLIYGLPFQTLDTFK 221

Query: 189 MELQRALSYAVDHLSLY 205
             L  AL+   D  +++
Sbjct: 222 ETLSLALTLNPDRFAVF 238


>gi|227485573|ref|ZP_03915889.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227236439|gb|EEI86454.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 433

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 96/200 (48%), Gaps = 8/200 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +   +Y++ PFC  +C YC + + +  +   +  ++   + E++   ++  P ++ SI+ 
Sbjct: 127 DDFSLYINIPFCPTRCDYCSYPTLIGSHH-DKGTYVAYLIREIE---EINLPSNLDSIYI 182

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS +    I  IL  I K +T     E+T EA    ++++   +  +  GV RISL
Sbjct: 183 GGGTPSYLTADEIEKILTSINKKFTYK---ELTFEAGREDTLDIKKLEILKAGGVLRISL 239

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
             Q+   + L+ L R+ +    +     A+++   ++ D I  L  +++  +        
Sbjct: 240 NPQTFNREILQKLNRDIDMDHFLKIYKAAKDLGFIVNMDFIVGLEGESVDDFSKNFPILQ 299

Query: 196 SYAVDHLSLYQLTIEKGTLF 215
               D+++ + L I+ G+ +
Sbjct: 300 DLLPDNITFHALAIKSGSKY 319


>gi|169335844|ref|ZP_02863037.1| hypothetical protein ANASTE_02270 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258582|gb|EDS72548.1| hypothetical protein ANASTE_02270 [Anaerofustis stercorihominis DSM
           17244]
          Length = 454

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 10/205 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE----NFIQSFLTEMQWMRQLTGPRSI 71
            N   +Y+H PFC  +C YC F S +     G +     +    L E+  + ++    SI
Sbjct: 133 DNKYSLYIHIPFCPARCTYCSFPSKIC---TGNDLILNEYTNVLLKEVNMISEIIDKNSI 189

Query: 72  S--SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKA 128
           +  SI+ GGGTP ++  +    + + I KN     N+E T E      +           
Sbjct: 190 NIDSIYIGGGTPGILNEELTHKLTNSILKNIIKDKNIEFTFELGRADMLTKEKLDILNND 249

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
            VNRI L  QS+ +  L    R+ + +E   A  L +     ++ DLI  L   +++ + 
Sbjct: 250 KVNRICLNPQSMSKDVLDNFNRDISPAEFYKAADLIKQYNFILNSDLIMGLNSDSISDFI 309

Query: 189 MELQRALSYAVDHLSLYQLTIEKGT 213
            E++  ++   ++++++ L++++ +
Sbjct: 310 NEVKTLINLKAENITIHTLSLKRSS 334


>gi|318041938|ref|ZP_07973894.1| oxygen independent coprophorphyrinogen III oxidase 1 [Synechococcus
           sp. CB0101]
          Length = 453

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 22/288 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
           +  L +YVH PFC   C YC  N    +   KV  E ++ +   E++ +   +   R ++
Sbjct: 52  TAPLSLYVHVPFCRHACWYCGCNRITTQLGSKV-VEPYLAALAKELELISAAMPQRRRLA 110

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+ +       +   I +++ +  ++E +IE NP  +  +     R  G NR
Sbjct: 111 QLHWGGGTPNYLNADETRQLWQLIERHFDLEPDLEASIEVNPEFLSRDAALQLRALGFNR 170

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS G+Q  + +  + + R     +    +   R   F  ++ DLI  LP QT  ++   L
Sbjct: 171 ISFGIQDADPEVQKAVNRVVPVEQLRRVMGWLREASFASVNVDLICGLPLQTPDRFRTTL 230

Query: 192 QRALSYAVDHLSLYQLTI--EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +       D +SL+      E+  L  K+  D    LPS+   + +    Q +  + G  
Sbjct: 231 ELVQELRPDRISLFSFAYLPEQLPLQRKIAADD---LPSQRERIVMLEDAQRLLCSAGYE 287

Query: 250 AYEISNHSFLG--------AESLH-NLNYWRYG---DYIGIGPGAHSR 285
           A  + +++  G        +  LH N   +  G   + +G+GP A S+
Sbjct: 288 AIGMDHYALAGDSLAAAARSGRLHRNFQGYTTGGELELLGVGPTAISQ 335


>gi|117922358|ref|YP_871550.1| coproporphyrinogen III oxidase [Shewanella sp. ANA-3]
 gi|117614690|gb|ABK50144.1| Radical SAM domain protein [Shewanella sp. ANA-3]
          Length = 445

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 20/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLEKFGTGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A    N  + I +       ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNRLNGQYNQLSAW 287

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E
Sbjct: 288 AFGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE 334


>gi|304405270|ref|ZP_07386930.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
 gi|304346149|gb|EFM11983.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
          Length = 460

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 124/280 (44%), Gaps = 10/280 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISSI 74
           L +Y+H PFC   C +C +    V +++     ++ + + E++ M   T       I+S+
Sbjct: 45  LNLYIHVPFCDSACSFCPYYKLGVNKFRDFNAEYLDAVVKEIE-MYAATPYFQQHKIASV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRI 133
            FGGG P ++  ++   ++  I K++ V  N   + E   +SV+ V+  +G    G+NR+
Sbjct: 104 HFGGGNPFMMSLKDYERLIGTIHKHFKVEINDNWSSEGTINSVKSVDYMKGLLSLGINRV 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S G+Q+  E   R      +  +  + I   +        D++Y LP Q++     +L++
Sbjct: 164 SFGIQTFNEDVRRKTRIKTSIDQIYSGIDKLKTAGMDYCIDMMYNLPDQSIETMISDLEK 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  H+ +Y L +   T   K  K+    + PS+   + ++ +       +G     
Sbjct: 224 VTELDPYHIDMYNLAVFPNTKLDKQIKNKKYEISPSQENQLMMFKIGHQWLMDNGYKQII 283

Query: 253 ISNHSFLGAES-LHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
            S +S    E  + +L Y    + +GI  GA SR  V  H
Sbjct: 284 TSTYSRRQQEPHIGDLLYLTNNNVLGI--GASSRGYVDGH 321


>gi|77464272|ref|YP_353776.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides 2.4.1]
 gi|1708185|sp|P51008|HEMZ_RHOS4 RecName: Full=Coproporphyrinogen-III oxidase, anaerobic 2;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1070381|emb|CAA89819.1| anaerobic coproporphyrinogen oxidase [Rhodobacter sphaeroides]
 gi|77388690|gb|ABA79875.1| Anaerobic coproporphyrinogen oxidase (HemZ) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 450

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/330 (20%), Positives = 134/330 (40%), Gaps = 31/330 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
            S+ +Y+H PFC + C +C   +           +  +  +E+  +R    P   ++ + 
Sbjct: 49  GSISLYLHVPFCRRLCWFCACRTQGTSSDAPVRAYAAALKSELALLRARLAPGVRLARMH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+L+ P  I  +   I       +  + ++E +P+ ++        +AG+ R+S+
Sbjct: 109 WGGGTPTLLPPTLIHELALAIRDAVPSDAETDFSVEIDPTEIDAARLDALFEAGMTRVSI 168

Query: 136 GVQSLEEQSLRFLGRNHN--ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           GVQ  +    + +GR  +   ++ +      R +   +  D++Y LP QT       +Q+
Sbjct: 169 GVQDFDPLIQQSIGREQSFELTQRLTEDLRHRGLM-GLDADILYGLPHQTAPGVADSVQK 227

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-----VDLYNLTQSITSAHGL 248
            LS + D +++       G           L++P+ ++      +DL+   +++    G 
Sbjct: 228 LLSLSPDRVAVL------GYAHVPAVSRRQLMIPTASIPGPEERLDLFETARTLILWDGY 281

Query: 249 HAYEISNHSFLGAESLHNLNYWR-------YGD-----YIGIGPGAHSRVKVGSHRVAIS 296
               + + +  G    H     R       Y D      IG+G  A SR   G  + A S
Sbjct: 282 QQVGLDHFARAGDPLAHAHACGRLCRSFQGYTDDRAEVLIGLGASAISRFPQGFTQNAPS 341

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
              H    L+ +R    +      LS E +
Sbjct: 342 TSDH----LRAIRSGRFSTARGHVLSDEDR 367


>gi|113972057|ref|YP_735850.1| coproporphyrinogen III oxidase [Shewanella sp. MR-4]
 gi|114049287|ref|YP_739837.1| coproporphyrinogen III oxidase [Shewanella sp. MR-7]
 gi|113886741|gb|ABI40793.1| Radical SAM domain protein [Shewanella sp. MR-4]
 gi|113890729|gb|ABI44780.1| Radical SAM domain protein [Shewanella sp. MR-7]
          Length = 445

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 20/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLEKFGTGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A    N  + I +       ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNRLNGQYNQLSAW 287

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E
Sbjct: 288 AFGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE 334


>gi|99082388|ref|YP_614542.1| coproporphyrinogen III oxidase [Ruegeria sp. TM1040]
 gi|99038668|gb|ABF65280.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           TM1040]
          Length = 451

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 94/190 (49%), Gaps = 4/190 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   + +     +I+    E+  + R L     ++ + +G
Sbjct: 51  ISLYVHVPFCRRLCWFCACRTQGTQSESPVRAYIEVLKQELALLARALPEGVRLARLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+  + I+ + + I     ++   E ++E +P+ ++         AG+NR S+GV
Sbjct: 111 GGTPTLLSAEMISDLAEAIFAVTPMAKGGEFSVEIDPNEIDDARLDALAAAGMNRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q  + Q    +GR         A+ +  AR I   ++ D+++ LP Q   +    +Q+ L
Sbjct: 171 QDFDPQIQETIGRIQPFDLTRDAVDMIRARGIT-SLNADILFGLPHQNRMRMTESVQKLL 229

Query: 196 SYAVDHLSLY 205
           S + D ++LY
Sbjct: 230 SLSPDRVALY 239


>gi|289807915|ref|ZP_06538544.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 154

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 6/116 (5%)

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           VLP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH 
Sbjct: 11  VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHG 70

Query: 285 RVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
           +V     R+  + + +HP  +++     G  +  +  +S + +  EF M   RL E
Sbjct: 71  KVTFPDGRILRTTKTRHPRGYMQ-----GRYLESQRDVSDDDKPFEFFMNRFRLLE 121


>gi|257791458|ref|YP_003182064.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
 gi|257475355|gb|ACV55675.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
          Length = 441

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 18/183 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN +  R +V +  F  +   EM  ++ L       SI+ GGGT
Sbjct: 40  LYMHVPFCERLCPYCSFNRYPFREEVARPYF-ANMRKEMLMLKDLG--YDFESIYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGV 137
           P+++  + +   LD    N+ +    E+  E NP+ +    ++  QG     V R+S+GV
Sbjct: 97  PTVMIDE-LCETLDMARDNFNIR---EVASETNPNHLTQPWLDKLQG----RVQRLSVGV 148

Query: 138 QSLEEQSLRFLGR--NHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQR- 193
           QS ++  L+ + R   + + + I   I  A   F  ++ D+I+  P QT      +L++ 
Sbjct: 149 QSFDDDLLKQMDRYEKYGSGDVILERIAEAEPYFDSLNVDMIFNFPSQTEDVLMADLEKI 208

Query: 194 ALS 196
           ALS
Sbjct: 209 ALS 211


>gi|268678916|ref|YP_003303347.1| coproporphyrinogen dehydrogenase [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616947|gb|ACZ11312.1| Coproporphyrinogen dehydrogenase [Sulfurospirillum deleyianum DSM
           6946]
          Length = 421

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 156/358 (43%), Gaps = 27/358 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   CPYC FN      K    ++ +    E+  ++ L G R  + +  GGGT
Sbjct: 45  LYIHVPFCTMFCPYCSFNK-FNYTKEAATHYFKHLREEILHVKAL-GYR-FNYLVIGGGT 101

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQS 139
           P LI+ + +   ++ + K + +     ++ E++P+ ++       R  G V+R+S+GVQ+
Sbjct: 102 P-LIDEEELIQTIELVKKLFDIK---HVSCESDPNHIQPKTV--LRLDGLVDRLSVGVQT 155

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            ++  L+ LGR     +  E    I     I P  S DLI+  P Q+      +++    
Sbjct: 156 FDDTLLKKLGRYEKFGSGEEVYRKIASMLGILPITSVDLIFNFPNQSKENLLYDIETLTK 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY--NLTQSITSAHGLHAYEIS 254
            + +  S Y L              G   L +E    ++   +L +S  S HG  ++   
Sbjct: 216 LSPEQSSFYPLMTSSMVKSSVTKTLGKFSLTNEYEFFNIIKESLKKSYPSRHGW-SFSKE 274

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
             +      + N       +Y+G+G G+ S +    +    +++K+ E     + +   A
Sbjct: 275 KEAIFDEYVIDN------EEYVGVGSGSFSFINNTLYHNEFALDKYAEC----IAQRKSA 324

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
           VV++    +  +    LM+ L     +S K +E++ G  ++   ++ L    F + ++
Sbjct: 325 VVKERTFEANSRMYYRLMVDL-FNGKLSKKKFEIMFGIKIEDALKKELMALKFAKAIK 381


>gi|320162443|ref|YP_004175668.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerolinea thermophila UNI-1]
 gi|319996297|dbj|BAJ65068.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerolinea thermophila UNI-1]
          Length = 433

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 154/352 (43%), Gaps = 35/352 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           Q   +  +Y H PFC   CPYC FN    R+   +    Q F +  + MR +     +  
Sbjct: 33  QNGKAYMLYAHVPFCESLCPYCSFN----RFLFDERKARQYFSSLREEMRMVAKRGYTFD 88

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+++  + + +I   +A++  +    E++ E NP+ ++           V R
Sbjct: 89  TLYIGGGTPTILMDELVQII--DLARD--LFGVREVSCETNPNHLD-ERLIDLLAPRVQR 143

Query: 133 ISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +S+GVQS ++  LR + R     +  E +  +      F   + DLI+  P Q +   + 
Sbjct: 144 LSVGVQSFDDDLLRRINRYDRFGSGKEILERVQRTAPAFNAFNIDLIFNFPGQDLASIDR 203

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGL 248
           +L+ AL      ++ Y L              G +    E    ++Y ++ ++++S   L
Sbjct: 204 DLRLALESGATQITAYPLMTSPSVRRALEKTVGTVEFSRE---AEMYEHIVETLSSVFEL 260

Query: 249 H-AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             A+  S       +SL +    +  +Y+G+G G+ S +         S++ + + W+  
Sbjct: 261 STAWTFSRK----GKSLIDEYIVKSEEYVGVGSGSFSYLNGTLLVNTFSLQSY-QRWV-- 313

Query: 308 VRKNGHAVV--EKEFLSSEQQADEFLM--MGLRLREGISVKDWEMLAGRNLD 355
                HA +  ++ F   +Q    F+M   GLRL +    + WE   G+ ++
Sbjct: 314 --SERHAPIAGKRRFSRLDQMRYRFMMDLFGLRLDK----RQWERDFGKPIE 359


>gi|257789814|ref|YP_003180420.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
 gi|257473711|gb|ACV54031.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
          Length = 438

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 35/249 (14%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC + CPYC FN    R+   ++    +  +   EM  ++ L       S++ G
Sbjct: 40  LYMHVPFCERLCPYCSFN----RFPFAEDRARPYFANMRKEMLMLKDLG--YDFESLYVG 93

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++    I  + D I       S  E++ E NP+ + + ++    +  V R+S+GV
Sbjct: 94  GGTPTIM----IDELCDTIDMARETFSIGEVSSETNPNHL-IPSYLDKLQGRVQRLSVGV 148

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS +   L+ + R     +  E +  I  A   F  ++ D+I+  P QT      +++R 
Sbjct: 149 QSFDNDLLKQMDRYDKYGSGEEILERIGEASPYFTSLNVDMIFNFPAQTEDVLFSDIERV 208

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +       + Y L                  + S +VA  L      +  A     YEI 
Sbjct: 209 VESGTSQTTFYPL------------------MASPSVARSLARTVGKVDYAREQRFYEII 250

Query: 255 NHSFLGAES 263
           +    G E+
Sbjct: 251 SEVLAGGEN 259


>gi|167945034|ref|ZP_02532108.1| coproporphyrinogen III oxidase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 218

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A  +N +GQ    L +Y H PFC   C YC  N    + +     ++Q    E++   QL
Sbjct: 50  AQASNASGQ---PLSLYFHIPFCDTVCFYCACNKVATKDRSLPAQYLQRVYRELEMQGQL 106

Query: 66  TG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNF 122
               R +  + +GGGTP+ I    +  ++D   +N+T+    + E +IE +P   + +  
Sbjct: 107 FDRSRPVEQLHWGGGTPTFISHAEMRELMDETRRNFTLLDDDSGEYSIEIDPREAQGDTI 166

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           +  R+ G NR+SLGVQ  + +  + + R  +    +  +  AR+
Sbjct: 167 KLLRELGFNRMSLGVQDFDPKVQKAVNRIQSKQVTLDVLQAARD 210


>gi|83859099|ref|ZP_00952620.1| coproporphyrinogen III oxidase [Oceanicaulis alexandrii HTCC2633]
 gi|83852546|gb|EAP90399.1| coproporphyrinogen III oxidase [Oceanicaulis alexandrii HTCC2633]
          Length = 447

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 2/169 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
             + +Y+H P+C   C YC  N+         E +++  L E+  +  +L G   +S + 
Sbjct: 48  KPISLYLHVPYCKSLCWYCGCNTRATTQDGPIEAYLKVLLKELALVADRLPGRMRVSHLA 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+++ P  +  ++  I   +      E  IE +P     ++ Q   + G  R S 
Sbjct: 108 LGGGTPAILNPDQMDRLMAAIYDRFEFEEGAERAIEIDPCHFSKDDAQALARNGFTRAST 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           GVQS +    R + R        A+ +  R     +++ DL+Y LP QT
Sbjct: 168 GVQSFDPAVQRAINRIQPYEVVEASFNRLREAGVMKINADLLYGLPLQT 216


>gi|327188611|gb|EGE55821.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CNPAF512]
          Length = 63

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           MGLRLREG+ +  W+ L+GR LD + E  L    FIER+  SRLRCT  GM +LDSV+A+
Sbjct: 1   MGLRLREGVDLARWQQLSGRELDPKREEFLLEHKFIERIGNSRLRCTPSGMLILDSVVAD 60

Query: 393 LA 394
           LA
Sbjct: 61  LA 62


>gi|312127058|ref|YP_003991932.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777077|gb|ADQ06563.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 471

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 11/252 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQ 64
           N ++    +S  +Y+  P C  +C YC F+ H   R+ K     +  S + E +  + + 
Sbjct: 146 NILSKLEPSSACLYIGIPICPTRCLYCSFSCHEMTRQVKSLIGMYTDSLICEFEKTYQKI 205

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +++FGGG+P+++  +NI  I   + +N       EIT EA  P +++    Q
Sbjct: 206 EENKNRIVAVYFGGGSPAVLGIENIKKIFTNLFENLEKDYIREITFEAGRPDTIDEKLLQ 265

Query: 124 GYRKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
              +   +   R+ +  Q+  + +L+ +GRNH   +   A   A    F  ++ D+I  L
Sbjct: 266 YLAEINQDLNVRLCINPQTSNDNTLKIIGRNHTFEDIKRAFAQAYEYGFKNINSDVILGL 325

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    ++  ++  L      ++++ L+I++ +L     K  +     E     L + T
Sbjct: 326 PGEGENDYKKTIEDVLKLFPASITIHTLSIKRASLL--RFKWNEYEFMDEETVNSLLDWT 383

Query: 240 QSITSAHGLHAY 251
           Q I   HG   Y
Sbjct: 384 QYILEEHGYIPY 395


>gi|254457620|ref|ZP_05071048.1| oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
 gi|207086412|gb|EDZ63696.1| oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
          Length = 455

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 4/237 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
             S  + +Y H PFC   C +C  N      +     ++     E+  + + +   R + 
Sbjct: 43  DSSRPISLYFHLPFCKNACYFCGCNVVFTSKEDKMLRYMDYLKRELVILSKHVDCNREVL 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+      +  I+  I   +    ++ EI+ E +P  ++ +  +   +AG N
Sbjct: 103 QMHFGGGTPTFFSAAQLKEIIAEIKSYFPNFRADAEISCEIDPRHIDEDQMRVMSEAGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S G+Q   E+    + R    +    A+ LAR      ++ DLIY LP Q++  ++  
Sbjct: 163 RVSFGIQDFNEKVQIAVHRVQPYAITKYAMDLARKYNMISVNVDLIYGLPFQSLETFKET 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L  +L+   D  +++        L   M K  +  LP  +  + +   T    ++HG
Sbjct: 223 LALSLTLNPDRFAVFNYA-HVPWLKKTMRKIDETTLPLPDEKLQIMQYTIDFLTSHG 278


>gi|218459793|ref|ZP_03499884.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 66

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 30/44 (68%)

Query: 15 GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE 58
          G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E
Sbjct: 20 GEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKE 63


>gi|317489273|ref|ZP_07947790.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325832303|ref|ZP_08165302.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|316911674|gb|EFV33266.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325486139|gb|EGC88593.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 438

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 35/249 (14%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC + CPYC FN    R+   ++    +  +   EM  ++ L       S++ G
Sbjct: 40  LYMHVPFCERLCPYCSFN----RFPFAEDRARPYFANMRKEMLMLKDLG--YDFESLYVG 93

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++    I  + D I       S  E++ E NP+ + + ++    +  V R+S+GV
Sbjct: 94  GGTPTIM----IDELCDTIDLARETFSIGEVSSETNPNHL-IPSYLDKLQGRVQRLSVGV 148

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS +   L+ + R     +  E +  I  A   F  ++ D+I+  P QT      +++R 
Sbjct: 149 QSFDNDLLKQMDRYDKYGSGEEILERIGEASPYFTSLNVDMIFNFPAQTEDVLFSDIERV 208

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +       + Y L                  + S +VA  L      +  A     YEI 
Sbjct: 209 VESGTSQTTFYPL------------------MASPSVARSLARTVGKVDYAREQRFYEII 250

Query: 255 NHSFLGAES 263
           +    G E+
Sbjct: 251 SEVLAGGEN 259


>gi|18645060|gb|AAL76361.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [uncultured marine proteobacterium]
          Length = 442

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 2/177 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PR 69
           M G     L + V+ PFC  +C  CD  + V       + ++ +  +E+  +    G  R
Sbjct: 46  MRGDFDKGLSLQVYLPFCTTRCISCDRVAEVATDSSVIDRYLNNLGSELALITDRIGRGR 105

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++ +  GGGTPSL+    +AL+   I +++ + S+ E   E  P    +   +  +  G
Sbjct: 106 PLAQLHVGGGTPSLLNSSQLALLAALIDEHFYIGSDCETVFEITPDRTSLTQLELIKGLG 165

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
              + + ++ +E  +   LGR+++       +  A+ + F  ++FD++Y LP QT++
Sbjct: 166 FRNLRIELREIESSAPLGLGRSYSPELLQDMLSNAKQVNFDAITFDVVYGLPGQTVS 222


>gi|110678999|ref|YP_682006.1| coproporphyrinogen III oxidase [Roseobacter denitrificans OCh 114]
 gi|109455115|gb|ABG31320.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter
           denitrificans OCh 114]
          Length = 449

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             + +Y+H PFC + C YC  N  + +       + ++   E+  + Q    R  +S + 
Sbjct: 45  KPVSLYLHVPFCRELCWYCGCNMKLAKKDAPVAQYAKTLNREIGLLAQHLPQRMQVSHLH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+ + P ++   +D +  ++  + + E+ IE++P ++         + G  R S 
Sbjct: 105 WGGGTPTALVPDDLERAMDAVQASFDFTPDAELAIESDPRTLTDEMTLRIGQMGFTRASF 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +  + + R         ++   R      ++FDLIY LP QT+      ++  
Sbjct: 165 GVQEFDPKVQKAINRIQPPDMVRHSVEGLRAAGVTGINFDLIYGLPHQTVDTLLETIRLC 224

Query: 195 LSYAVDHLSLY 205
           +    D ++L+
Sbjct: 225 VEMQPDRIALF 235


>gi|119504116|ref|ZP_01626197.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
 gi|119460119|gb|EAW41213.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
          Length = 442

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 2/177 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PR 69
           M G     L + V+ PFC  +C  CD  + V       + ++ +  +E+  +    G  R
Sbjct: 46  MRGDFDKGLSLQVYLPFCTTRCISCDRVAEVATDSSVIDRYLNNLGSELALITDRIGRGR 105

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++ +  GGGTPSL+    +AL+   I +++ + S+ E   E  P    +   +  +  G
Sbjct: 106 PLAQLHVGGGTPSLLNSSQLALLAALIDEHFYIGSDCETVFEITPDRTSLTQLELIKGLG 165

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
              + + ++ +E  +   LGR+++       +  A+ + F  ++FD++Y LP QT++
Sbjct: 166 FRNLRIELREIESSAPLGLGRSYSPELLQDMLSNAKQVNFEAITFDVVYGLPGQTVS 222


>gi|254418128|ref|ZP_05031852.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
 gi|196184305|gb|EDX79281.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
          Length = 459

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 4/165 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGG 79
           +Y+H PFC + C YC  N+          +++   L E   + +  G P  + SI  GGG
Sbjct: 59  LYLHIPFCKRLCWYCGCNTRAMNRVGVMTSYVDLLLKEADLVLERIGRPVRVGSIHLGGG 118

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++ P+ +  +  G+A  + +    EI  E +P  +     +   + G++R SLGVQ 
Sbjct: 119 TPNMLPPEELERLFAGLAARFDLGDCFEIAAELDPEVLTQAWVEAAGRIGLSRASLGVQD 178

Query: 140 LEEQSLRFLGRNHNASEAI--AAIHLARNIFPRMSFDLIYALPKQ 182
           L  +    + R  +  E I  AA  L       ++ DL+Y LP Q
Sbjct: 179 LSPKVQAAVNRPES-FETIRWAAEALRGQGVTSLNLDLMYGLPLQ 222


>gi|221106035|ref|XP_002155044.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 93

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           +  E  I+  L E Q M ++   + I S++FGGGTPSL  P+ I  +L+ + K   V  N
Sbjct: 3   IDNELMIKCLLIEFQSMCRMYDVKKIKSVYFGGGTPSLAPPKLINRLLEEVCKYTNV--N 60

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
            EI++E NP+S E      ++ AG++R+S+GVQ
Sbjct: 61  CEISMEVNPTSTEKKKLSDFKSAGISRVSIGVQ 93


>gi|127511008|ref|YP_001092205.1| coproporphyrinogen III oxidase [Shewanella loihica PV-4]
 gi|126636303|gb|ABO21946.1| Radical SAM domain protein [Shewanella loihica PV-4]
          Length = 447

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 18/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + + +  +  F+ S   EM+ ++ L       S++ GGGT
Sbjct: 65  LYAHVPFCHTLCSFCTFHRFLFKEEKARAYFV-SLRKEMEMVKALG--YDFESMYIGGGT 121

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K +   S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 122 TTVLEDE-LARTIEFAKKLF--PSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 177

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 178 NDDILAMTDRLEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 237

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 238 DPRQITTYPLMITHQT---RKSVKGKLAAPQGDMARQYRQILNSLNGQYN----QLSAWA 290

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           F  A +     Y   Y +Y+G+G G+ S +    +    S+ K+ E+
Sbjct: 291 FGKANNEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQEN 337


>gi|304412336|ref|ZP_07393944.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|307306120|ref|ZP_07585865.1| Radical SAM domain protein [Shewanella baltica BA175]
 gi|304349371|gb|EFM13781.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|306910993|gb|EFN41420.1| Radical SAM domain protein [Shewanella baltica BA175]
          Length = 445

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 148/341 (43%), Gaps = 27/341 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   K  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-KGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L+    L +     +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASR 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L     ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAQQADMANQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +F G       + +   Y +Y+G+G G+ S +    +    S+ K+ E         GH 
Sbjct: 288 AF-GKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQERI-----AAGHM 341

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            VE++   S++   ++  +       +S K +    G NLD
Sbjct: 342 GVEQQKNYSKKDVMQYRFLLGMFSGRLSRKYFRDTFGVNLD 382


>gi|254503073|ref|ZP_05115224.1| oxygen-independent coproporphyrinogen III oxidase [Labrenzia
           alexandrii DFL-11]
 gi|222439144|gb|EEE45823.1| oxygen-independent coproporphyrinogen III oxidase [Labrenzia
           alexandrii DFL-11]
          Length = 474

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 8/172 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR---QLTGPRSISS 73
           ++L +Y+H P+C + C YC  ++   R     + +  +   E++      Q  GP  +  
Sbjct: 61  DTLSLYLHVPYCREICHYCGCHTKATRKDAPLKAYADTMCRELELTAAHLQKAGP--VKH 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I +GGGTPSL+  Q++  +   +   +    ++E  IE +P  V         + G+NR 
Sbjct: 119 IHWGGGTPSLLPRQSLVELTGLMRVLFDFDPDLEHAIELDPRLVTQELADTLVQVGINRA 178

Query: 134 SLGVQSLEEQSLRFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           SLGVQ  +    + +GR   +   E     +L +     ++FDL+Y LP Q+
Sbjct: 179 SLGVQDFDPDVQKAIGRVQPYEVVEQTTG-YLRKAGLDALNFDLMYGLPGQS 229


>gi|16519766|ref|NP_443886.1| conserved hypothetical 27.8 kDa protein [Sinorhizobium fredii
           NGR234]
 gi|2493815|sp|P55477|Y4HJ_RHISN RecName: Full=Uncharacterized protein y4hJ
 gi|2182429|gb|AAB92448.1| conserved hypothetical 27.8 kDa protein [Sinorhizobium fredii
           NGR234]
          Length = 260

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S + FGGGTP++I+P++   ++D + +++       I +E  P +      +    A V
Sbjct: 64  VSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEV 123

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           + +SLGVQS +    +   R    ++  AAI   R I   R++FDL+Y LP QT+     
Sbjct: 124 SHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQSCVQ 183

Query: 190 ELQRALSYAVDHLSLY 205
               A++   D L+++
Sbjct: 184 SATAAVAMRPDRLAVF 199


>gi|332975977|gb|EGK12850.1| oxygen-independent coproporphyrinogen III oxidase [Psychrobacter
           sp. 1501(2011)]
          Length = 522

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 20/215 (9%)

Query: 11  MTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--- 66
           +T +  N+ L +Y H PFC   C YC  N  + +      ++++    E++  R L    
Sbjct: 81  LTRRDPNTPLSLYFHIPFCRHLCYYCGCNKIITKKNSDAGDYLEYLKREVKQKRALLERP 140

Query: 67  ---GPRSISSIFFGGGTPSLIEPQNIALI---------LDGIAKNWTVSSNVEI---TIE 111
              G   +  +  GGGTP+    + +  +             +++ T   + E+   +IE
Sbjct: 141 ASGGKPYVKQLHLGGGTPTFFSDEELTELWEFLQTQFEFAPTSQDKTTDEHPEVGDYSIE 200

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
            +P  +     +  R  G NR+S GVQ L+      + R  +     + +   R + F  
Sbjct: 201 IDPREIRDTTLEVLRNLGFNRVSFGVQDLDHNVQIAVNRVQSEELIQSVMEETRRLGFKS 260

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + DLIY LP QT   +   ++R +  + D LS++
Sbjct: 261 TNIDLIYGLPHQTPQTFAKTVERIIDISPDRLSIF 295


>gi|300118693|ref|ZP_07056421.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
 gi|298723942|gb|EFI64656.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
          Length = 181

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +FY +   G L LP E+    +Y +       HG   YEISN S    ES HNL YW   
Sbjct: 1   MFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFSKGDNESRHNLTYWNNE 60

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
           +Y G G GAHS V  G     +   K    +   + + G   ++   ++ +++ +E L +
Sbjct: 61  EYYGFGAGAHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYLDVHVVTEKEKMEEELFL 116

Query: 334 GLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           GLR  +G+S     K + M   +    + + N Q QG +E      +R T++G  + + V
Sbjct: 117 GLRKTKGVSKIAFQKKFNMEMNQVFAKQLQNN-QEQGLLEESN-GYVRLTRKGKLLGNEV 174

Query: 390 IANLAV 395
             +  +
Sbjct: 175 FQSFLI 180


>gi|57168503|ref|ZP_00367636.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
 gi|305432919|ref|ZP_07402077.1| radical SAM domain protein [Campylobacter coli JV20]
 gi|57020008|gb|EAL56685.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
 gi|304444073|gb|EFM36728.1| radical SAM domain protein [Campylobacter coli JV20]
          Length = 436

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 17/193 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+ +    ++ +  F ++   E+  ++        SS++ GGGT
Sbjct: 45  LYAHIPFCHTFCPYCSFHKYYYDEELAKIYF-ENLRKELMLIKD--KGFDFSSMYVGGGT 101

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGV 137
            +LI    +   L+   K + +    EI+ E++P+ +   +++ F+G     ++R+S G+
Sbjct: 102 -TLINENELLKTLELCKKLFNIK---EISCESDPNHIIPEKLSMFKGI----IDRLSCGI 153

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS +++ L+ + R +   ++ +    I  A  I P  S DLI+  P QT  Q   +L+ A
Sbjct: 154 QSFDDEILKKIARYNKFGSSKQLQEKISKALGILPIFSLDLIFNFPSQTEEQLLNDLKIA 213

Query: 195 LSYAVDHLSLYQL 207
            + A   ++ Y L
Sbjct: 214 KNLAPQQITTYPL 226


>gi|212637694|ref|YP_002314219.1| coproporphyrinogen III oxidase [Shewanella piezotolerans WP3]
 gi|212559178|gb|ACJ31632.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
          Length = 442

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 25/304 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  F+ S   EM  ++ L       S++ GGGT
Sbjct: 60  LYAHVPFCHTLCSFCTFHRFLFKEDKARAYFV-SLRKEMDMVKNLG--YDFESMYIGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K +   S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 117 TTVLEDE-LARTIEHAKKLF--PSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 172

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 173 NDDILTMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASKL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++      +  S+   +     ++S  +
Sbjct: 233 DPRQITTYPLMITHQT---RKSVKGKLAAPHGDMVRQYRQILNSLNGQYN----QLSAWA 285

Query: 258 FLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           F G  +    + +   Y +Y+G+G G+ S +    +    S++K+ E        +GH  
Sbjct: 286 F-GKTNDEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNTFSLKKYQERV-----SSGHMG 339

Query: 316 VEKE 319
           VE++
Sbjct: 340 VEQQ 343


>gi|239617122|ref|YP_002940444.1| Coproporphyrinogen dehydrogenase [Kosmotoga olearia TBF 19.5.1]
 gi|239505953|gb|ACR79440.1| Coproporphyrinogen dehydrogenase [Kosmotoga olearia TBF 19.5.1]
          Length = 406

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 15/195 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S ++G+Y+H PFC   C +C +  H  +Y        + +   ++   +L  PR  +S++
Sbjct: 28  SENIGLYLHVPFCKHFCDFCPY--HKLKYDPA---LAREYAGLVKKEYRLHEPRRFNSLY 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGVNRI 133
            GGGTPS     ++ L+ + +     +  NV  EI +E +P        Q  ++ G+N I
Sbjct: 83  IGGGTPS----GDLTLLKELLD---FLRDNVMGEIALEVHPIDATSEKLQEMKELGINYI 135

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+QSL++  L+  GR ++A     A+  + +  F  +  DL++        + + +L+
Sbjct: 136 SLGIQSLDDDVLKHFGRGYSAKTNFLALENSIKAGFDFVDVDLVFDPLAFADKKIQSDLE 195

Query: 193 RALSYAVDHLSLYQL 207
           + +  +   +S+Y +
Sbjct: 196 KIMKLSPQQISVYPM 210


>gi|57505841|ref|ZP_00371766.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis RM3195]
 gi|57015871|gb|EAL52660.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis RM3195]
          Length = 451

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 16/231 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +Y H PFC   C +C  N      +  ++ ++     E+  +  L    + + 
Sbjct: 41  ESKRDLSLYFHLPFCRSACYFCGCNVIYTAKEESKKRYLTYLFRELDILSSLLNTQKKVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    Q +  ++  I   +T   +  E++ E +P            + G N
Sbjct: 101 QMHFGGGTPTFFSAQELEHLILKIKSIFTNFDAQAELSCEIDPRFFNDAQADVLVQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           RIS GVQ  +E+  + + R  +     EA+  +  +R I   ++ DLIY LP Q +  ++
Sbjct: 161 RISFGVQDFDERVQKEIHRIQSFDLTKEALFKVR-SRGI-KSVNIDLIYGLPFQNLQSFK 218

Query: 189 MELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDL 235
             L + L    D L+++       ++K      M K  +  LPS +V + +
Sbjct: 219 QTLDKILLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLQI 264


>gi|212695919|ref|ZP_03304047.1| hypothetical protein ANHYDRO_00452 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677042|gb|EEB36649.1| hypothetical protein ANHYDRO_00452 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 431

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 132/293 (45%), Gaps = 30/293 (10%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             NS  +Y++ PFC ++C YC + + V    V +  ++   L E   ++ ++  + + +I
Sbjct: 123 APNSFNLYINIPFCPQRCKYCSYPTIVSNI-VDKNQYVDFLLKE---IKGISLDKKLDTI 178

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS +  +++  IL  + + +T     E T+EA    +++      +++  V RI
Sbjct: 179 YLGGGTPSNLSLKDLDRILSLLNEKFTFD---EFTLEAGREDTLDFEKLDLFKEKNVGRI 235

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  +  L  + R  +    I     A+++   ++ D I  L  +    ++   + 
Sbjct: 236 SLNPQTFSKNVLENVNRPIDFENFIKIYKYAKDLGFIINMDFIIGLFGENRESFKKNFEI 295

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+L+ + L  + G+ +++ + +GD+     N A+ +    +  T  +    Y +
Sbjct: 296 LKDLNPDNLTFHALAQKVGSKYFEENINGDI-----NEAIKISKDIEKFTKENSYKPYYL 350

Query: 254 -SNHSFLGAESLHNLNY------WRYG--------DYIGIGPGAHSRVKVGSH 291
               + +G  +L N+ Y       RY         + IG+G  A+S++  G  
Sbjct: 351 YRQKNIIG--NLENVGYEKGNTAQRYNILINEELENIIGLGMNANSKLMNGKK 401


>gi|163749407|ref|ZP_02156655.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161330816|gb|EDQ01743.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 430

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 20/270 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGP-RSISSIFFGG 78
           +Y+H PFC   C +C F  H  ++   QE+  + +   + Q +RQ+       + ++ GG
Sbjct: 52  LYIHIPFCHTLCRFCSF--HKVKF---QESLAREYFQALRQEIRQVIAKGYRFNRVYIGG 106

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT +++E + I  I   + K+ T     E++ E++P   +  + +   K  V+R+S+GVQ
Sbjct: 107 GTTTILEDELIKTI--ELIKSLTTIR--EVSCESDPIYFKEGHPE-LLKGLVDRMSIGVQ 161

Query: 139 SLEEQSLRFLGRNHNASEAI-AAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S ++  L+  GR       +  A +++R I  FP ++ D++Y    Q       +L + +
Sbjct: 162 SFDDAILKITGRFEKFGSGLQQAEYVSRAIELFPTVNVDMMYGFKMQNADTVHADLLQTM 221

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D ++ Y LTI  G       K G L  P+  +      + Q++   + +      +
Sbjct: 222 ALNPDQITTYPLTIGIGK---NRKKAGCLAGPAHELWPQFLAVKQALADRYVMEFPWTFS 278

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
            SF   + + N       D  G+G GA  R
Sbjct: 279 RSF--GQPVQNKYVLDGEDCFGVGSGAFGR 306


>gi|34556564|ref|NP_906379.1| coproporphyrinogen III oxidase [Wolinella succinogenes DSM 1740]
 gi|34482278|emb|CAE09279.1| PUTATIVE OXIDOREDUCTASE [Wolinella succinogenes]
          Length = 453

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 13/181 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC FN  +   +  +  F +S   EM+   +L G R   S++ GGGT
Sbjct: 74  LYAHVPFCSTLCTYCTFNRFLFEEEKARRYF-RSLRQEMKMAYEL-GYR-FDSMYVGGGT 130

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++  +  A I   +A+        E++ E++P++++      + K  V+RIS+GVQS 
Sbjct: 131 TSILVDELCATI--DLARELFPLK--EVSCESDPNNIDKETM-AHLKGRVDRISVGVQSF 185

Query: 141 EEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRAL 195
           ++  L+ +GR        E ++ +       P ++ DLI+  P Q   M + ++E+ + L
Sbjct: 186 DDDILKRVGRYEKFGGGEETLSKLQALMGALPVVNIDLIFNFPTQDEKMLRRDLEIIKRL 245

Query: 196 S 196
           S
Sbjct: 246 S 246


>gi|226328810|ref|ZP_03804328.1| hypothetical protein PROPEN_02710 [Proteus penneri ATCC 35198]
 gi|225201996|gb|EEG84350.1| hypothetical protein PROPEN_02710 [Proteus penneri ATCC 35198]
          Length = 164

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
            ++    + +A G   YE S +   G +  HNLNYWR+GDY+GIG GAH ++     R+ 
Sbjct: 8   FFSEGDKLLTAAGYQQYETSAYCKPGFQCEHNLNYWRFGDYLGIGCGAHGKISFEDGRIM 67

Query: 295 ISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +++ KHP+ +++     G  + ++ F+ ++ +  EF M   RL E    +D+    G
Sbjct: 68  RTVKTKHPKGFME-----GRYLDQQHFVDNDDRPFEFFMNRFRLLEAFPRQDFSDYTG 120


>gi|325845774|ref|ZP_08169038.1| coproporphyrinogen dehydrogenase HemZ [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481912|gb|EGC84943.1| coproporphyrinogen dehydrogenase HemZ [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 431

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 108/236 (45%), Gaps = 13/236 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NS  +Y++ PFC ++C YC + + V    V +  ++   L E++ +      + + +I+ 
Sbjct: 125 NSFNLYINIPFCPQRCKYCSYPTIVSNI-VDKNQYVDFLLKEIKGINL---DKKLDTIYL 180

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS +  +++  IL  + + +T     E T+EA    +++      +++  V RISL
Sbjct: 181 GGGTPSNLPLKDLDRILSLVNEKFTFD---EFTLEAGREDTLDFEKLDLFKEKNVGRISL 237

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
             Q+  +  L  + R  +    I     A+++   ++ D I  L  +    +    +   
Sbjct: 238 NPQTFSKNVLENVNRPIDFENFIKIYQYAKDLGFVINMDFIIGLFGENRESFRKNFEILK 297

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               D+L+ + L  + G+ +++ + +GD+     N A+ +    +  T  +    Y
Sbjct: 298 DLKPDNLTFHALAQKVGSKYFEENINGDI-----NEAIKISKDIEKFTKENSYKPY 348


>gi|157377544|ref|YP_001476144.1| coproporphyrinogen III oxidase [Shewanella sediminis HAW-EB3]
 gi|157319918|gb|ABV39016.1| Coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 445

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 129/289 (44%), Gaps = 22/289 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  F+ S   EM  ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSFCTFHRFIFKEDKARAYFV-SLRKEMDMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  ++ E++ E++P  ++   F+   +  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQS 174

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILAMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQYDLDMAAK 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAAPQGDMARQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +F G  +    + +   Y +Y+G+G G+ S +    +    S+ K+ E+
Sbjct: 288 AF-GKTNNEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNNFSLRKYQEN 335


>gi|315638023|ref|ZP_07893208.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis JV21]
 gi|315481871|gb|EFU72490.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis JV21]
          Length = 451

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 16/231 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +Y H PFC   C +C  N      +  ++ ++     E++ +  L    + + 
Sbjct: 41  ESKRDLSLYFHLPFCRSACYFCGCNVIYTAKEESKKRYLTYLFRELEILSSLLDTQKKVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I   +T   +  E++ E +P            + G N
Sbjct: 101 QMHFGGGTPTFFSAEELESLILKIKSIFTNFDAQAELSCEIDPRFFNDAQADVLVQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           RIS GVQ  +E+  + + R  +     EA+  +  +R I   ++ DLIY LP Q +  ++
Sbjct: 161 RISFGVQDFDERVQKEIHRIQSFDLTKEALFKVR-SRGI-KSVNIDLIYGLPFQNLQSFK 218

Query: 189 MELQRALSYAVDHLSLYQLT----IEKGTLFYKMHKDGDLVLPSENVAVDL 235
             L + L    D L+++       ++K      M K  +  LPS +V + +
Sbjct: 219 QTLDKILLLNPDRLAIFNYAHVPWLKKN-----MRKFDENTLPSPDVKLQI 264


>gi|329998615|ref|ZP_08303180.1| HemN region [Klebsiella sp. MS 92-3]
 gi|328538596|gb|EGF64697.1| HemN region [Klebsiella sp. MS 92-3]
          Length = 176

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           VLP ++   D++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH 
Sbjct: 8   VLPDDDALWDIFEQGHQLLSAAGYQQYETSAYAKPGFQCQHNLNYWRFGDYLGIGCGAHG 67

Query: 285 RVKVGSHRVAISIE-KHPESWLK---MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           ++     R+  + + +HP  +++   + R++     +K F        EF M   RL E 
Sbjct: 68  KITFPDGRILRTAKTRHPRGYMEGRYLERQHDVEEADKPF--------EFFMNRFRLLEA 119

Query: 341 ISVKDWEMLAG 351
               ++    G
Sbjct: 120 APRAEFSRYTG 130


>gi|257065831|ref|YP_003152087.1| coproporphyrinogen III oxidase [Anaerococcus prevotii DSM 20548]
 gi|256797711|gb|ACV28366.1| Coproporphyrinogen dehydrogenase [Anaerococcus prevotii DSM 20548]
          Length = 438

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 8/201 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
              +Y++ PFC  +C YC + + V   K   E +I S + E++    +  P  + +I+ G
Sbjct: 124 DFSLYINIPFCPTRCKYCSYPTIVGDRKEKGE-YISSLIYEIE---NINLPEGLDAIYIG 179

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPS I+  ++  +L  I   ++     E T EA    ++     +  +  GV RISL 
Sbjct: 180 GGTPSFIDEDDLERLLYAINNKFSYK---EFTFEAGREDTLNTRKLEILKAGGVGRISLN 236

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            QS  ++ +   GR ++    +     A+++   ++ D I  L  ++   +    +   +
Sbjct: 237 PQSFNKEVVERAGRTYDYDHLLEIYQGAKDLGFIVNMDFIIGLIGESSELFRRNFEVLEA 296

Query: 197 YAVDHLSLYQLTIEKGTLFYK 217
              D+++ + L ++ G+ +++
Sbjct: 297 LRPDNITFHALAMKVGSKYFE 317


>gi|157963937|ref|YP_001503971.1| coproporphyrinogen III oxidase [Shewanella pealeana ATCC 700345]
 gi|157848937|gb|ABV89436.1| Coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
          Length = 442

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 18/286 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 60  LYAHVPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKALG--YDFESMYIGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K +   S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 117 TTVLEDE-LARTIEHAKKLF--PSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 172

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 173 NDDILAMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASKL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 233 DPRQITTYPLMITHQT---RKSVKGKLAAPQGDMARQYRQILNSLNGQYN----QLSAWA 285

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           F  A       Y   + +Y+G+G G+ S +    +    S+ K+ E
Sbjct: 286 FGKANDEGFDEYVIDFDEYLGVGSGSFSFLNDTLYVNTFSLRKYQE 331


>gi|111115489|ref|YP_710107.1| HemN-related protein [Borrelia afzelii PKo]
 gi|110890763|gb|ABH01931.1| HemN-related protein [Borrelia afzelii PKo]
          Length = 377

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 35/272 (12%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIFNR------------ILEELKYHLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLCRQDNLKFIFTSLSKYINLALLEEFTLEIIPGHVDFEKFKLLDEFYITRINLCVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E I    L  NI  FP  ++ D+   +P Q  +  + +LQ  L
Sbjct: 114 SFSLKFRKIMGIPEISYEKINI--LINNIRKFPFDLNIDMSINMPLQKKSHLKFDLQELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD---LYNLTQSITSAHGLHAYE 252
           SY  +H+               ++++ DL L + N +++   L+        ++G   YE
Sbjct: 172 SYMPEHICFSDF----------IYEEEDLALGNFNNSIESEKLWFCALECLESNGYINYE 221

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           I+N +  G ES HN   W+   Y+G+G  A S
Sbjct: 222 IANFALKGHESKHNKLNWKLKPYLGLGLHAVS 253


>gi|167622057|ref|YP_001672351.1| coproporphyrinogen III oxidase [Shewanella halifaxensis HAW-EB4]
 gi|167352079|gb|ABZ74692.1| Coproporphyrinogen dehydrogenase [Shewanella halifaxensis HAW-EB4]
          Length = 442

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 18/268 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 60  LYAHIPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKALG--YDFESMYIGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K +   S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 117 TTVLEDE-LARTIEHAKKLF--PSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 172

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 173 NDDILTMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 233 DPRQITTYPLMITHQT---RKSVKGKLAAPHGDMARQYRQILNSLNGQYN----QLSAWA 285

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHS 284
           F  A +     Y   Y +Y+G+G G+ S
Sbjct: 286 FGKANNEGFDEYVIDYDEYLGVGSGSFS 313


>gi|216263425|ref|ZP_03435420.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia afzelii ACA-1]
 gi|215980269|gb|EEC21090.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia afzelii ACA-1]
          Length = 377

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 35/272 (12%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIFNR------------ILEELKYHLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLCRQDNLKFIFTSLSKYINLALLEEFTLEIIPGHVDFEKFKLLDEFYITRINLCVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E I    L  NI  FP  ++ D+   +P Q  +  + +LQ  L
Sbjct: 114 SFSLKFRKIMGIPEISYEKINI--LINNIRKFPFDLNIDMSINMPLQKKSHLKFDLQELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD---LYNLTQSITSAHGLHAYE 252
           SY  +H+               ++++ DL L + N +++   L+        ++G   YE
Sbjct: 172 SYMPEHICFSDF----------IYEEEDLALGNFNNSIESEKLWFCALECLESNGYINYE 221

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           I+N +  G ES HN   W+   Y+G+G  A S
Sbjct: 222 IANFALKGHESKHNKLNWKLKPYLGLGLHAVS 253


>gi|317490604|ref|ZP_07949077.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325831382|ref|ZP_08164636.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|316910306|gb|EFV31942.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325486636|gb|EGC89084.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 441

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 18/183 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN +  R +V +  F  +   EM  ++ L       SI+ GGGT
Sbjct: 40  LYMHVPFCERLCPYCSFNRYPFREEVARPYF-ANMRKEMLMLKDLG--YDFESIYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGV 137
           P+++    +   LD     + +    E+  E NP+ +    ++  QG     V R+S+GV
Sbjct: 97  PTVMI-DELCETLDLARDEFNIR---EVASETNPNHLTQPWLDKLQG----RVQRLSVGV 148

Query: 138 QSLEEQSLRFLGR--NHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQR- 193
           QS ++  L+ + R   + + + I   I  A   F  ++ D+I+  P QT      +L++ 
Sbjct: 149 QSFDDDLLKQMDRYEKYGSGDVILERIAEAEPYFDSLNVDMIFNFPSQTEDVLMADLEKI 208

Query: 194 ALS 196
           ALS
Sbjct: 209 ALS 211


>gi|256826500|ref|YP_003150459.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
 gi|256582643|gb|ACU93777.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
          Length = 443

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 11/207 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   CPYC FN +  R ++    F  S   EM  ++ L       SI+ GGGT
Sbjct: 40  LYMHVPFCEVLCPYCSFNRYPFRPEIAGPYF-ASMRKEMLMLKGLG--YDFESIYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++  + +   LD    N+ +    E+  E NP+ +     +  +   V R+S+GVQS 
Sbjct: 97  PTVMIDE-LCETLDVARDNFHIK---EVACETNPNHLTRPYLEKLQHR-VQRLSVGVQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ + R     +  E +  I  A      ++ D+I+  P QT      +L++    
Sbjct: 152 DDTLLKQMDRYRKYGSGQEILERIEEAHGYIDSLNVDMIFNFPSQTEEGLFADLEKIALC 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDL 224
               ++   L    GT+     K G L
Sbjct: 212 GARQVTFSPLYASNGTVAKMASKFGQL 238


>gi|119953434|ref|YP_945643.1| coproporphyrinogen oxidase, anaerobic [Borrelia turicatae 91E135]
 gi|119862205|gb|AAX17973.1| coproporphyrinogen oxidase, anaerobic [Borrelia turicatae 91E135]
          Length = 379

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 118/271 (43%), Gaps = 2/271 (0%)

Query: 36  DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDG 95
           D + ++   K     F    L E+ +  ++ G   I +++    T  L    ++   L  
Sbjct: 8   DLSIYIDLTKCFSYVFFDKILQELSYYLKVLGSPQIKTLYIKYETSGLGNDSDLESFLTS 67

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NA 154
           +++N+   +  E T E +P  + ++         V+RIS+ ++S   + L+ +G    + 
Sbjct: 68  LSQNFDFLTLDEFTFELHPLEITLSLLAILNDFSVSRISIDIKSFSSKLLKVMGVYEISV 127

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +E   A++  R     ++ DL   +P Q       +L + ++ A +H+ L ++ ++    
Sbjct: 128 AEINNAVNGIRKFDFDLNIDLNVNIPYQEKMHLRNDLVKLVACAPEHICLSEILVDGENC 187

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD 274
                KD      +E  A D +        ++G   YEISN +  G ES HNL YW    
Sbjct: 188 IIDFFKDVS-SNYNEAKAEDFWFYAFDFLESNGYMNYEISNFALKGHESKHNLRYWELKP 246

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           Y+G+G  + S + +       ++ K  +++L
Sbjct: 247 YLGLGVNSVSLLVISKGDGLKAVIKMDDNFL 277


>gi|159507389|gb|ABW97714.1| HemN [Bacillus megaterium]
          Length = 171

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 4/120 (3%)

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           +Y L        G H YEISN +  G ES+HNL YW   DY GIG GAHS +  G  R  
Sbjct: 11  MYELLMKEMDKQGFHQYEISNFAKSGYESIHNLTYWNNDDYYGIGAGAHSYID-GIRRAN 69

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           I   K    ++  V++ G+A + +  ++  ++ +E + +GLR  +G+S ++++    R L
Sbjct: 70  IGPLK---KYIDSVQQKGNAYLNEVSVTEAEKMEEEMFLGLRKTKGVSKEEFKQKFNREL 126


>gi|297544736|ref|YP_003677038.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842511|gb|ADH61027.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 354

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGGTPSLI 84
           C  KC +C+ NS   R+ ++ +E   Q+  + ++     T PR   I   FFGG    + 
Sbjct: 17  CPFKCVFCNQNSITGRQREITEEEVRQTIESHLK-----TLPRDAEIEVSFFGGSFTGI- 70

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            PQ++     GIAK +     ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 71  -PQDMQNFYLGIAKEYLDKGKIDAIRLSTRPDYIDTKILQNLKRYQVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + + A++L R    ++   ++  LP+  + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPEDNLEKSLNTAYKIVELKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G  +  +   AV++      I   + +    I      G ++
Sbjct: 190 IYPTLVIKDTYLERMYKEGRFLPLTLQEAVEISKKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|255025041|ref|ZP_05297027.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-208]
          Length = 160

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
           + G L LPS++   ++Y+L  +    HG   YEISN +  G +S HN+ YW    Y G G
Sbjct: 2   QKGKLFLPSQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFG 61

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
            GAH  V    +     I+K+ E     ++KN     +++ L+ +++ +E + +GLR  E
Sbjct: 62  AGAHGYVGNTRYSNFGPIKKYMEP----LQKNILPTFQQKELTLKEKMEEEMFLGLRKVE 117

Query: 340 GISVKDWEMLAGRNLDIECERNLQR 364
           G++   ++   G++LD      +Q+
Sbjct: 118 GVNKHHFKQKFGQDLDATFMNAIQK 142


>gi|311114772|ref|YP_003985993.1| hypothetical protein HMPREF0421_20888 [Gardnerella vaginalis ATCC
           14019]
 gi|310946266|gb|ADP38970.1| conserved hypothetical protein [Gardnerella vaginalis ATCC 14019]
          Length = 215

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 19/143 (13%)

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           G +  P ++     Y +   + ++ GL  YEISN +  G ES HNL YW+  D+ GIGPG
Sbjct: 8   GTIHAPDDDDEAAKYEVADELFNSAGLEWYEISNWARTGFESQHNLGYWKNIDWAGIGPG 67

Query: 282 AHSRVKVGSHRVAISIEK-------------------HPESWLKMVRKNGHAVVEKEFLS 322
           AHS     S     S++                    HP+ W   +          E ++
Sbjct: 68  AHSHYNSVSGISKQSMDDCALLADSSKFYNLRSWDILHPKRWAHAINAGNVPWQNYECIN 127

Query: 323 SEQQADEFLMMGLRLREGISVKD 345
           SE    E +M+GLR+REG+S+ +
Sbjct: 128 SEDALIEEVMLGLRIREGLSIDE 150


>gi|218264406|ref|ZP_03478263.1| hypothetical protein PRABACTJOHN_03959 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222009|gb|EEC94659.1| hypothetical protein PRABACTJOHN_03959 [Parabacteroides johnsonii
           DSM 18315]
          Length = 108

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/100 (35%), Positives = 56/100 (56%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +E ++ + + EMQ  ++  G   + +I+FGGGTPS ++  +   I   I   + +SS  E
Sbjct: 4   KEPYVSAVIREMQLRQEYIGGEPLDTIYFGGGTPSQLQQADFERIFKTIDCLFNISSCKE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           IT+EANP  +        R    NR+S+GVQS +E+ L F
Sbjct: 64  ITLEANPDDMTPEYVASLRNLPFNRVSMGVQSFKEKDLPF 103


>gi|284008732|emb|CBA75428.1| oxygen-independent coproporphyrinogen III oxidase [Arsenophonus
           nasoniae]
          Length = 474

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 118/251 (47%), Gaps = 29/251 (11%)

Query: 4   LSAYENNMTGQ--GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ- 60
           L+++ N+M  +   + ++ ++V+ P C  +C +C F + +      + + +   + ++  
Sbjct: 56  LTSFYNDMNKEIKKAENIHLWVYIPTCRYRCHFCQFPTVIVNPNTAKADSLFKEIVDLNI 115

Query: 61  -----WMRQLTGPRSIS----SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
                W++Q+    ++S    +IF  GGTPSL+  + +  +++    N+  SS   +  E
Sbjct: 116 KEATFWLKQVPNLTNVSIGEFNIF--GGTPSLLPDRELKRLINFYKNNFNFSSTT-MRFE 172

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
             P S+        ++ G +++S G QS ++  ++  GR H A E    I  A  + F  
Sbjct: 173 GEPGSLNKEYLSLLKELGFSKLSFGTQSFQDHLIKACGRKHTAEEFFKTIADANTLGFEL 232

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI------------EKGTLF-YK 217
           +S DLIY L  QT+   + +++      + H+   +L +            E+ +L+  K
Sbjct: 233 ISVDLIYGLFGQTVDDVKNDMEIIKKLNISHVVCTKLHMKEFMETRTGVSGERDSLWQKK 292

Query: 218 MHKDGDLVLPS 228
           +  D D ++PS
Sbjct: 293 IISDADKLIPS 303


>gi|218663762|ref|ZP_03519692.1| coproporphyrinogen III oxidase [Rhizobium etli IE4771]
          Length = 391

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEPQNIA 90
           C YC  ++ V R       ++Q    EM  +   T  P +I  + FGGGTP++I P+ + 
Sbjct: 2   CWYCGCHTKVTRGDQPILTYLQMLQEEMCLVSAKTKTPLNIDQLHFGGGTPTIIGPEKLL 61

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            ++  +  N+  + + ++ +E +P ++E        +A V+R S+GVQ+ +    + + R
Sbjct: 62  GLIGLLKANFDFTGSSQLALEIDPRTLEEEMAAALGEAEVHRASIGVQTFDPVVQKAINR 121

Query: 151 NHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW--------EMELQRALSYAVDH 201
             +  + + A+   R      ++FDLIY LP QT+           EM  +R   +   H
Sbjct: 122 AQSEEQTMEAVSRLRQAGVVSINFDLIYGLPHQTVDSCIETTRIAIEMRPERFAVFGYAH 181

Query: 202 LSLY---QLTIEKGTL 214
           +  +   QL I +G L
Sbjct: 182 VPSFKKHQLLINEGAL 197


>gi|332992781|gb|AEF02836.1| coproporphyrinogen III oxidase [Alteromonas sp. SN2]
          Length = 365

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 1/148 (0%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M   + L   + + ++  GGG+PS +       ++  I K++ +SS  E +IE +P +V 
Sbjct: 1   MVAKKSLYKDKKVVALHLGGGSPSFLSTIQHTYLMYLIKKHFLISSEAEFSIELDPRNVT 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +   + G  R+S GVQ +     + + R  + +     +  A+NI +  ++ DLIY
Sbjct: 61  CEYLKDLNELGYTRVSFGVQDINVDVQQSINRVQSTAHIAKLVFDAKNIGYTSVNLDLIY 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLY 205
            LPKQTM ++   +    + + D +SL+
Sbjct: 121 GLPKQTMEKFRTTVVAVKAMSPDRVSLF 148


>gi|256827561|ref|YP_003151520.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
 gi|256583704|gb|ACU94838.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
          Length = 435

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 17/169 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y+H PFC + CPYC FN    R+   ++    +  S   EM  + +L       S++ G
Sbjct: 40  LYMHVPFCERLCPYCSFN----RFPFSEDRARPYFDSLRREMLMLAELG--YDFDSLYIG 93

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++  + +  I D   K +++    E++ E NP+ + +  +       V R+S+GV
Sbjct: 94  GGTPTIMIDELVRTI-DLARKTFSIK---EVSSETNPNHL-IEPYLEQLDGRVQRLSVGV 148

Query: 138 QSLEEQSLRFLGRNHNASEA---IAAIHLARNIFPRMSFDLIYALPKQT 183
           QS +   L  +GR     +A      I  A   F  M+ D+I+  P QT
Sbjct: 149 QSFDNGLLDQMGRLQKYGDAETIFERIRTASPHFLSMNVDMIFNFPAQT 197


>gi|302541326|ref|ZP_07293668.1| coproporphyrinogen III oxidase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458944|gb|EFL22037.1| coproporphyrinogen III oxidase [Streptomyces himastatinicus ATCC
           53653]
          Length = 449

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 15/209 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LT 66
           +  ++L +Y+H PFC  +C +C+  + +       E    ++L  ++  RQ       L 
Sbjct: 39  EPKDALSLYLHIPFCEVRCGFCNLFTRI----GAPEGLTTAYLDALE--RQADAVSEALG 92

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGY 125
                ++  FGGGTP+ +E   +  + D   K      + V +++EA+P++   +     
Sbjct: 93  DGARFAAAAFGGGTPTFLEAAELERLCDIAEKRMGADLAAVPLSVEASPATATADRLAVL 152

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
              G  R+SLGVQS  +   R   R    ++  AA+   R    P ++ DLIY +  Q+ 
Sbjct: 153 AARGATRLSLGVQSFVDAEARSAVRPQRRADVEAALTRIREAGIPVLNIDLIYGIDGQSE 212

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             W   L  AL++  + L LY L +   T
Sbjct: 213 RSWLRSLDAALAWRPEELYLYPLYVRPLT 241


>gi|163749872|ref|ZP_02157117.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161330386|gb|EDQ01365.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 445

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 18/287 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K +   S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKKLF--PSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILTMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEIIQYDLDMAAKL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L     ++A       Q + S +G +  ++S+ +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAASQGDMA---RQYRQILNSLNGQYT-QLSSWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E+
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNNFSLRKYHEN 335


>gi|157862716|gb|ABV90479.1| hypothetical protein [Sinorhizobium fredii]
          Length = 259

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S + FGGGTP++I+P++   ++D + +++     + + IE    + E+    G   A V
Sbjct: 64  VSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTIAVEIEPRTFTAEMAEALG--AAEV 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           + +SLGVQS +    +   R    ++  AAI   R I   R++FDL+Y LP QT+     
Sbjct: 122 SHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQSCVQ 181

Query: 190 ELQRALSYAVDHLSLY 205
               A++   D L+++
Sbjct: 182 SATAAVAMRRDRLAVF 197


>gi|288801340|ref|ZP_06406794.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288331723|gb|EFC70207.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 456

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 26/258 (10%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YLSA + +      N +  Y+H P+C   C YC  NS+        + ++++   E+  +
Sbjct: 33  YLSAVDAS-NDANRNHVSFYLHIPYCNHLCHYCGCNSYAMAKGQQVDKYVEALHREIDIV 91

Query: 63  RQLTGP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                   R IS I +GGG+P+ +    +  + + +          EI IE +P  +  +
Sbjct: 92  AAHIDKANRRISQIHYGGGSPTSLPIHYVKELNEHMLSLMPTIEKPEIAIECHPGYLNES 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++    + G  R SLG+Q      L+ + R  +       + + R     ++ D ++ LP
Sbjct: 152 DWNALCECGFTRYSLGIQDFNNDVLKAVNRLPSLLPVSEILSILRAHQATINMDFLFGLP 211

Query: 181 KQTMTQWEMELQRALSYAVDHLSLY-----------QLTIEKGTLFYKMHKDGDLVLPSE 229
            QT   +E  +Q A+    D L  +           QL +EK            L LP+ 
Sbjct: 212 LQTPESFEKTMQMAVEMQPDRLVTFSYGHVPWVHKRQLILEK------------LGLPTA 259

Query: 230 NVAVDLYNLTQSITSAHG 247
           +V  D+ N   ++  + G
Sbjct: 260 DVKQDMMNRAINVLHSAG 277


>gi|34764149|ref|ZP_00145018.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27886082|gb|EAA23389.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 165

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 4/168 (2%)

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +++LP QT    + +L++ ++   +H+S+Y L  E+GT F++  K G L     ++   +
Sbjct: 1   MFSLPNQTWAMLQNDLEKLVNLNPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASM 60

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
           Y        +     YEISN S  G ES HN  YW   +Y+G+G  A   +    ++   
Sbjct: 61  YEYIIEFLKSKDYIHYEISNFSKKGFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFF 120

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           +++ +  +    + KN   + EKE L+ E       ++G RL   I V
Sbjct: 121 NLKDYYNN----LDKNILPIDEKEILTQEDIEQYRYLVGFRLLNKIIV 164


>gi|170729124|ref|YP_001763150.1| coproporphyrinogen III oxidase [Shewanella woodyi ATCC 51908]
 gi|169814471|gb|ACA89055.1| Coproporphyrinogen dehydrogenase [Shewanella woodyi ATCC 51908]
          Length = 445

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 20/288 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKALG--YDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +++E +    +   I    T+  N+ E++ E++P  ++   F+   +  V+R+S+GVQS
Sbjct: 120 TTVLEDE----LARTIEHAKTLFPNIKEVSCESDPQHLDSPEFKQL-EGLVDRMSIGVQS 174

Query: 140 LEEQSLRF---LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  L     L +  +  +    I  A+ +FP ++ DLI+    QT    + +L  A  
Sbjct: 175 FNDDILAMTDRLDKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEIIQHDLDMASK 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                ++ Y L I   T   +    G L     ++A     +  S+   +     ++S  
Sbjct: 235 LDPRQITTYPLMITHQT---RKSVKGKLAASQGDMARQYRQILNSLNGQYN----QLSAW 287

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +F  A +     Y   Y +Y+G+G G+ S +    +    S+ K+ E+
Sbjct: 288 AFGKANNEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNNFSLRKYHEN 335


>gi|126735823|ref|ZP_01751568.1| coproporphyrinogen III oxidase [Roseobacter sp. CCS2]
 gi|126715010|gb|EBA11876.1| coproporphyrinogen III oxidase [Roseobacter sp. CCS2]
          Length = 449

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 2/192 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
           +  + VY+H PFC + C +C   +          N+++    E++ +R  L    ++  +
Sbjct: 48  ATPVSVYIHIPFCERLCWFCACRTQGTTTLEPVVNYLRVVKKELELLRATLPAGVTMGQM 107

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+++ P  I  +   +      +     ++E +P+ V+        + G+ R S
Sbjct: 108 HWGGGTPTILPPDMIRELAQAVKDVIPPAPAFSFSVEIDPTLVDDGKIAALAEMGMTRAS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+Q         +GR  +     A +   R      ++ DL+Y LP QT  +    + +
Sbjct: 168 IGIQDFALDVQDAIGRKQSFGATRACVDSLRAAGITSLNADLVYGLPHQTPAKLANTIAK 227

Query: 194 ALSYAVDHLSLY 205
             +   D ++L+
Sbjct: 228 VRALDPDRIALF 239


>gi|326389509|ref|ZP_08211076.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325994514|gb|EGD52939.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 354

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGGTPSLI 84
           C  KC +C+ NS   ++ ++ +E   Q+  T ++     T PR   I   FFGG    + 
Sbjct: 17  CPFKCVFCNQNSITGQQQEITEEYVRQTIETHLK-----TLPRDAEIEVSFFGGSFTGI- 70

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            PQ++  +  GIAK +  +  ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 71  -PQDMQNLYLGIAKEYLDNGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + + A++L R    ++   ++  LP   + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G     +   AV++      I   + +    I      G ++
Sbjct: 190 IYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|224531741|ref|ZP_03672373.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia valaisiana VS116]
 gi|224511206|gb|EEF81612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia valaisiana VS116]
          Length = 376

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L ++++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIFNR------------ILDKLKYHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   ++   E T+E  P  V+   F+   +  V RI+LGVQ
Sbjct: 54  VDFCLCGQDNLKFIFTSLSKYINLALLEEFTLEIIPGYVDFEKFKLLDEFFVTRINLGVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G      E +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLKFRKIIGIPEIPYEKMNI--LINNIRKFPFDLNIDMTINMPLQKKSHLKYDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       EK  L     +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEKEGL---TLRDFDNGIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    Y+G+G  A S
Sbjct: 225 FALKGHESKHNKLNWELKPYLGLGLHAVS 253


>gi|319940751|ref|ZP_08015092.1| radical SAM domain-containing protein [Sutterella wadsworthensis
           3_1_45B]
 gi|319805811|gb|EFW02585.1| radical SAM domain-containing protein [Sutterella wadsworthensis
           3_1_45B]
          Length = 437

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 16/199 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +E F Q+   EM++++ L      ++++ GGGT
Sbjct: 55  LYAHVPFCHTLCTYCTFHRFLFKEWKAREYF-QNLRREMEYVKALG--YDFTAMYVGGGT 111

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGV 137
            +++E + +  +   +AK     S  EI+ E +P  +   +  N QG     V+R+S+GV
Sbjct: 112 TTILEDELVKTL--ELAKKL-FPSIKEISCETDPQVIMTPQFRNLQGL----VDRMSIGV 164

Query: 138 QSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           QS  ++ L+   R     +  +    +  A+ +FP  + D+++    Q++     ++++ 
Sbjct: 165 QSFNDEILKLSDRYEKFGSGEQIYERLQYAQELFPTCNVDMMFGFRGQSLDVLHEDMEKI 224

Query: 195 LSYAVDHLSLYQLTIEKGT 213
           +      ++ Y L +   T
Sbjct: 225 VKLNPRQVTTYPLMVTSQT 243


>gi|219685702|ref|ZP_03540515.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii Far04]
 gi|219672752|gb|EED29778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii Far04]
          Length = 377

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFS------------IFNKILEELKYYLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   ++   E T+E  P  V+   F+   +  + RI+LGVQ
Sbjct: 54  VDFCLCRQDSLKFIFTSLSKCINLALLEEFTLEIIPGYVDFEKFKLLDEFFITRINLGVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L +NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLKFRKIMGIPEISYEKMNI--LIKNIRKFPFDLNIDMTINIPFQKKSDLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+  L     +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYVPEHICFSDFICEEQDL---ALRDFDNGIGSEK----LWFYALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
               G ES HN   W    Y+G+G  A S
Sbjct: 225 FMLKGHESKHNKLNWELKPYLGLGLHAVS 253


>gi|269216970|ref|ZP_06160824.1| radical SAM domain protein [Slackia exigua ATCC 700122]
 gi|269129777|gb|EEZ60861.1| radical SAM domain protein [Slackia exigua ATCC 700122]
          Length = 474

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 19/170 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CP+C FN +    KV +  F +S   EM  ++ L        ++ GGGT
Sbjct: 40  LYMHVPFCQRLCPFCSFNRYRFDEKVARPYF-ESMRKEMLMLKDLG--YDFHDLYIGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV----EITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           P+        ++LD + +   ++ +     ++  E NP+ +        R   V R+S+G
Sbjct: 97  PT--------IMLDELCETIDLARDAFHIEDVGTETNPNHLAQPYLDKLR-GRVQRLSVG 147

Query: 137 VQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           VQS ++  L+ + R     +  E +  I  A   F  ++ D+I+  P QT
Sbjct: 148 VQSFDDGLLKQMDRYKKYGSGDEILERIAEAIPYFDSLNVDMIFNFPSQT 197


>gi|307264837|ref|ZP_07546399.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306920095|gb|EFN50307.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 354

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGGTPSLI 84
           C  KC +C+ NS   ++ ++ +E   Q+  T ++     T PR   I   FFGG    + 
Sbjct: 17  CPFKCVFCNQNSITGQQQEITEEYVRQTIETHLK-----TLPRDAEIEVSFFGGSFTGI- 70

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            PQ++  +  GIAK +  +  ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 71  -PQDMQNLYLGIAKEYLDNGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + + A++L R    ++   ++  LP   + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G     +   AV++      I   + +    I      G ++
Sbjct: 190 IYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISRKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|170727734|ref|YP_001761760.1| coproporphyrinogen dehydrogenase [Shewanella woodyi ATCC 51908]
 gi|169813081|gb|ACA87665.1| Coproporphyrinogen dehydrogenase [Shewanella woodyi ATCC 51908]
          Length = 439

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 13/196 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFGGG 79
           +Y+H PFC   C +C F+    + K  +    + F+   Q +R++       + ++ GGG
Sbjct: 54  LYIHIPFCHTLCRFCSFH----KVKFSEPLAREYFVALRQEIREVIAKGYRFNRVYIGGG 109

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           T +++E + I  I   + K  T     E++ E++P   +  N Q      V+R+S+GVQS
Sbjct: 110 TTTILEDELIKTI--EMIKGLTPIR--EVSCESDPIYFKEGNPQ-LLNGLVDRMSIGVQS 164

Query: 140 LEEQSLRFLGRNHNASEAIA-AIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ L+  GR       +  A ++AR I   P ++ D++Y    QT      +L++ L 
Sbjct: 165 FDDKILKASGRFEKFGSGLEQADYVARAIALIPTVNLDMMYGFKTQTPESVHWDLKQTLR 224

Query: 197 YAVDHLSLYQLTIEKG 212
              D ++ Y LTI  G
Sbjct: 225 LKPDQITTYPLTIGIG 240


>gi|332361346|gb|EGJ39150.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1056]
          Length = 178

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 9/171 (5%)

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           G L LP E++  +++    +     G   YEISN S  G ES HNL YW   +Y GIG G
Sbjct: 7   GKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKPGFESRHNLMYWDNAEYYGIGAG 66

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           A   V    ++    I +H   +L+ V + G+A V++E L+  ++ +E + +GLR + G+
Sbjct: 67  ASGYVDGVRYKNHGPI-RH---YLQAV-EAGNARVQEEALTLNEKMEEEMFLGLRKKSGV 121

Query: 342 SVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           S K +E   G + + +       L  QG +       +R T++G+ + D+V
Sbjct: 122 SKKRFEEKFGLSFEDQYGVVVSELTEQGLL-VTDRDIVRMTKQGLFLGDTV 171


>gi|148654158|ref|YP_001281251.1| coproporphyrinogen III oxidase [Psychrobacter sp. PRwf-1]
 gi|148573242|gb|ABQ95301.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter sp.
           PRwf-1]
          Length = 522

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSIS 72
           L +Y H PFC   C YC  N  + +      +++     E++  R L       G   + 
Sbjct: 90  LSLYFHIPFCRHLCYYCACNKIITKKNSDAGDYLAYLKNEVKQKRALLQRPDSGGKPYVK 149

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVE-----------ITIEANPSSVEVN 120
            +  GGGTP+    + +  +   +   +  + ++VE            ++E +P  +   
Sbjct: 150 QLHLGGGTPTFFSDEELTELWQFLQTQFEFAPTSVEQVSDEHPEMGDYSVEIDPREIRDT 209

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R  G NR+S GVQ L+++    + R  + +   + +   R + F   + DLIY L
Sbjct: 210 TLSVLRSLGFNRVSFGVQDLDDKVQIAVNRVQSEALIRSVMQETRRLGFQSTNIDLIYGL 269

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLY 205
           P QT   +   +Q  +  + D LS++
Sbjct: 270 PHQTPQTFAKTVQTIIDISPDRLSIF 295


>gi|213422841|ref|ZP_03355879.1| coproporphyrinogen III oxidase [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 68

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 41/62 (66%)

Query: 19 LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
          L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF GG
Sbjct: 7  LSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIGG 66

Query: 79 GT 80
          GT
Sbjct: 67 GT 68


>gi|289578460|ref|YP_003477087.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289528173|gb|ADD02525.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 354

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGGTPSLI 84
           C  KC +C+ NS   ++ ++ +E   Q+  + ++     T PR   I   FFGG    + 
Sbjct: 17  CPFKCVFCNQNSITGQQREITEEEVRQTIESHLK-----TLPRDAEIEVSFFGGSFTGI- 70

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            PQ++     GIAK +     ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 71  -PQDMQNFYLGIAKEYLDKGKIDAIRLSTRPDYIDTKILQNLKRYQVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + + A++L R    ++   ++  LP   + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMVGLPGDNLEKSLNTAYKIVKLKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G  +  +   AV++      I   + +    I      G ++
Sbjct: 190 IYPTLVIKNTYLERMYKEGRFLPLTLQEAVEISKKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|294146491|ref|YP_003559157.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
 gi|292676908|dbj|BAI98425.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
          Length = 438

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 2/191 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
            ++L +YVH P+C   C YC  N+           +++S   E+  +  +L G   +  I
Sbjct: 47  DDALSLYVHIPYCHDICWYCGCNTGAANRVQRLAAYVESLEREIATLAARLNGRGRVRRI 106

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+ +   +   +L  +   +  + + E+++E +P  ++          GV+R++
Sbjct: 107 AFGGGSPNSLPLVDFVRLLQQLLLCFE-AHHAELSVELDPRRLDGQWISTMAAMGVDRVN 165

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+        +GR         A+   R       FDL+Y LP QT       L+ A
Sbjct: 166 LGVQTFTPHVQARIGRIQPLDMVERAVGQLRAAGIATGFDLMYGLPGQTQDDLAATLEAA 225

Query: 195 LSYAVDHLSLY 205
           ++     ++L+
Sbjct: 226 IAMRPARIALF 236


>gi|315282377|ref|ZP_07870801.1| coproporphyrinogen dehydrogenase [Listeria marthii FSL S4-120]
 gi|313613979|gb|EFR87699.1| coproporphyrinogen dehydrogenase [Listeria marthii FSL S4-120]
          Length = 171

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 4/143 (2%)

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           G L LP ++   ++Y+L  +    HG   YEISN +  G +S HN+ YW    Y G G G
Sbjct: 1   GKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAG 60

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           AH  V    +     I+K+ E     +++N     +++ ++ +++ +E + +GLR  +G+
Sbjct: 61  AHGYVGDTRYSNFGPIKKYMEP----LQENKLPTFQQKEITLKEKMEEEMFLGLRKVDGV 116

Query: 342 SVKDWEMLAGRNLDIECERNLQR 364
           +   ++   G++LD      +Q+
Sbjct: 117 NKSHFKQKFGQDLDTTFAHAIQK 139


>gi|262163675|ref|ZP_06031416.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           VM223]
 gi|262027891|gb|EEY46555.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           VM223]
          Length = 331

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           +  + + EI+IE +P  +++      R+ G NR+S+GVQ   ++  + + R  +     A
Sbjct: 8   FDFADDAEISIEIDPREIQLEVLDHLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFA 67

Query: 160 AIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            +  A+ + F   + DLIY LPKQT   +   LQ+ L+     LS++        LF   
Sbjct: 68  LVERAKQLGFRSTNLDLIYGLPKQTAETFAQTLQQVLTMQPGRLSVFNYA-HMPQLFAAQ 126

Query: 219 H--KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
              KD DL    E +A+    L Q+I +  G      + + F+G +
Sbjct: 127 RKIKDADLPAAEEKLAI----LQQTIATLTG------AGYQFIGMD 162


>gi|213419717|ref|ZP_03352783.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 162

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 6/107 (5%)

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
           D++     + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH +V     R+
Sbjct: 3   DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRI 62

Query: 294 AISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
             + + +HP  +++     G  +  +  +S + +  EF M   RL E
Sbjct: 63  LRTTKTRHPRGYMQ-----GRYLESQRDVSDDDKPFEFFMNRFRLLE 104


>gi|94495976|ref|ZP_01302555.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           SKA58]
 gi|94424668|gb|EAT09690.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           SKA58]
          Length = 434

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 3/197 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +   QG+  + +Y+H P+C   C YC  N+           ++ +   E+    Q  G R
Sbjct: 39  DQIAQGT-PVSLYLHIPYCHDICWYCGCNTGAANRSHRLAAYVDALEQEIATTAQRLGGR 97

Query: 70  S-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             I+ I FGGG+P+ +   +   +L  + + +  + + +I++E +P  ++          
Sbjct: 98  GHITRIAFGGGSPNSLPLVDFVRLLQQVIRCFG-ARDAQISVELDPRRLDRAWIDAMGVM 156

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GV R++LGVQ+        +GR         A+     I   + FDL+Y LP Q++    
Sbjct: 157 GVGRVNLGVQTFTPAVQARIGRIQPLDMVERAVERFGRIGIAVGFDLMYGLPGQSLDDLA 216

Query: 189 MELQRALSYAVDHLSLY 205
             L+  +  A   ++L+
Sbjct: 217 ATLEATMRMAPARIALF 233


>gi|308404960|ref|ZP_07494181.2| hypothetical protein TMLG_02139 [Mycobacterium tuberculosis
           SUMu012]
 gi|308365370|gb|EFP54221.1| hypothetical protein TMLG_02139 [Mycobacterium tuberculosis
           SUMu012]
          Length = 114

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 23/117 (19%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR------- 63
           M GQ     GVY+H PFC+ +C YCDFN++      G        ++  +W+        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGG--------VSPDRWLLALRAELE 49

Query: 64  ----QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
               +L  P ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S
Sbjct: 50  LAAAKLDAP-TVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPES 105


>gi|307295156|ref|ZP_07574995.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
 gi|306878659|gb|EFN09878.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
          Length = 435

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 2/191 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
            ++L +Y+H P+C   C YC  N+           +++S   E+  +  +L G   +  I
Sbjct: 44  DDALSLYIHIPYCHDICWYCGCNTGAANRVQRLTAYVESLEREIATVAARLNGHGRVRRI 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+ +   +   +L  +   +  + + E+++E +P  ++          GV+R++
Sbjct: 104 AFGGGSPNSLPLVDFVRLLQQLLLCFD-AHHAELSVELDPRRLDGQWISTMAAMGVDRVN 162

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+        +GR         A+   R+      FDL+Y LP Q        LQ A
Sbjct: 163 LGVQTFTPHVQARIGRIQPLDMVERAVDQLRSAGIATGFDLMYGLPGQMQDDLAATLQAA 222

Query: 195 LSYAVDHLSLY 205
           ++     ++L+
Sbjct: 223 IAMQPARIALF 233


>gi|51598911|ref|YP_073099.1| HemN-related protein [Borrelia garinii PBi]
 gi|51573482|gb|AAU07507.1| HemN-related protein [Borrelia garinii PBi]
          Length = 377

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 31/270 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E+++   L G   I +++   
Sbjct: 11  LSLYINMSFCCK-----DFSIFNR------------ILGELKYYLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VNFCLCRQDSLKFIFTSLSKYINLALLEEFTLEIIPGYVDFEKFKLLDEFCITRINLSVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL----IYALPKQTMTQWEMELQRA 194
           S   +  + +G    + E I    L +NI  + SFDL       +P Q  +  + +L+  
Sbjct: 114 SFSLKFRKIMGIPEISYEKINI--LIKNI-RKFSFDLNIDMTINIPFQKKSDLKRDLKEL 170

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LSY  +H+       E+  L     +D D  + SE     L+        ++G   YEI+
Sbjct: 171 LSYIPEHICFSDFICEEQDL---TLRDFDSGIDSEK----LWFYALEYLESNGYINYEIT 223

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           N    G ES HN   W    Y+G+G  A S
Sbjct: 224 NFMLKGHESKHNKLNWELKPYLGLGLHAVS 253


>gi|256750710|ref|ZP_05491595.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750293|gb|EEU63312.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 380

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPSLI 84
           C  KC +C+ NS   + +   E +++   T    ++ L     I   FFGG   G P   
Sbjct: 17  CPFKCVFCNQNSITGQQQEITEEYVRQ--TIETHLKTLPSNAEIEVSFFGGSFTGIPQ-- 72

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + QN+ L   GIAK +     ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 73  DKQNLYL---GIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + + A++L R    ++   ++  LP   + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G     +   AV++      I   + +    I      G ++
Sbjct: 190 IYPALVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|224534457|ref|ZP_03675033.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia spielmanii A14S]
 gi|224514134|gb|EEF84452.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia spielmanii A14S]
          Length = 377

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 39/274 (14%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E+++   L G  +I +++   
Sbjct: 11  LSLYINMSFCCK-----DFSIFNR------------ILEELKYHLTLLGHPTIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   +    E T+E  P  V+   F+   +  + RI+LGVQ
Sbjct: 54  LDFCLCSQNDLKFIFTSLSKYINLPLLEEFTLEMIPGYVDFEKFKFLDEFCITRINLGVQ 113

Query: 139 SLEEQSLRF--LGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQR 193
           S    SL+F  + R    S     I L  NI  FP  +S D+   +P QT +  + +L+ 
Sbjct: 114 SF---SLKFRKIMRIPEISYEKMNI-LINNIRKFPFDLSIDMTINMPLQTKSYLKFDLKE 169

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD---LYNLTQSITSAHGLHA 250
            L Y  +H+       E          +   +L   N ++D   L+        ++G   
Sbjct: 170 LLLYMPEHICFSDFICE----------EEGFILRDFNNSIDSEKLWFYALECLESNGYIN 219

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           YEI+N +  G ES HN   W    Y+G+G  A S
Sbjct: 220 YEITNFALKGHESKHNKLNWELKPYLGLGLHAVS 253


>gi|203288088|ref|YP_002223103.1| HemN-related protein [Borrelia recurrentis A1]
 gi|201085308|gb|ACH94882.1| HemN-related protein [Borrelia recurrentis A1]
          Length = 379

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 20/272 (7%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           F +    E+ +  ++ G   + +++       L++   +   L  ++  +      E T 
Sbjct: 23  FYEKVFRELSYYLEVLGFPKVKTLYIKYNDLRLVDVFELKSFLTSLSAKFNFFDLDEFTF 82

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG-------RNHNASEAIAAIHL 163
           E +P ++  +         V+RISL ++S   + L  +G       + + A E I   H 
Sbjct: 83  ELHPGNITTSVLTVLDNFFVSRISLDIKSFSSKFLEKIGIFGVSIDKVNAAIENIHQFHF 142

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             NI     FD+   +     T  + +L + +SYA +H+SL ++ I+K         D  
Sbjct: 143 DLNI----DFDI--NILYHNKTNLKSDLVKVISYAPEHISLSEVLIDKNNCIVDSSSDA- 195

Query: 224 LVLPSENVAV---DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGP 280
               S+   +   DL+        +HG   YEISN +  G E  HN+ YW    Y+G+G 
Sbjct: 196 ---YSDYNDIRGEDLWFYAFDFLESHGYLNYEISNFALRGYECKHNVRYWELSPYLGLGL 252

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            A S + V  +    ++ +  +++L  V  + 
Sbjct: 253 QAVSLLFVSENNGLRAVIRKDDNFLYSVESSA 284


>gi|225551724|ref|ZP_03772667.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia sp. SV1]
 gi|225371519|gb|EEH00946.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia sp. SV1]
          Length = 377

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   + K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  LDFCLSRQDNLKFIFTSLFKYINLALLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E ++   L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYEKLSI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+    ++   D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEDFVFR---DFDNSIDSEK----LWFYALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    Y+G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPYLGLGLRAVS 253


>gi|167037695|ref|YP_001665273.1| radical SAM domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116110|ref|YP_004186269.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856529|gb|ABY94937.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929201|gb|ADV79886.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 354

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPSLI 84
           C  KC +C+ NS   + +   E +++   T    ++ L     I   FFGG   G P   
Sbjct: 17  CPFKCVFCNQNSITGQQQEITEEYVRQ--TIETHLKTLPSNAEIEVSFFGGSFTGIPQ-- 72

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + QN+ L   GIAK +     ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 73  DKQNLYL---GIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + + A++L R    ++   ++  LP   + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G     +   AV++      I   + +    I      G ++
Sbjct: 190 IYPALVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|294648242|ref|ZP_06725779.1| radical SAM domain protein [Bacteroides ovatus SD CC 2a]
 gi|292636430|gb|EFF54911.1| radical SAM domain protein [Bacteroides ovatus SD CC 2a]
          Length = 198

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 12/171 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ ++   +Y H PFC  KC YC+  S     +  + ++I ++L  +    
Sbjct: 30  LLPYLEQVEGQKAS---LYFHIPFCSHKCGYCNLFS----LQTNRADYIATYLETLHKQA 82

Query: 64  QLTGPRSISSIF----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           Q   P +   IF     GGGTP L+    +  +L+  A      S+   +IE +P   + 
Sbjct: 83  QQLSPLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADP 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FP 169
                 ++AGV RIS+G+QS   + L  L R         A+   R + FP
Sbjct: 143 ARLTWLKQAGVARISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFP 193


>gi|157962215|ref|YP_001502249.1| coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
 gi|157847215|gb|ABV87714.1| Coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
          Length = 428

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 15/197 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGG 78
           +Y+H PFC   C +C F+    + K  Q+  ++ F    + +R +  +G R  + ++ GG
Sbjct: 53  LYIHIPFCHTLCRFCSFH----KIKYNQQKALEYFQALRKEIRHVIESGLR-FNRVYIGG 107

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT +++E + +  I   + K+ T     EI+ E +PS     + +      V+R+S+G+Q
Sbjct: 108 GTTTILEDELVKTI--ELIKSLTTVR--EISCETDPSYFRTGHPE-VLNGLVDRMSIGLQ 162

Query: 139 SLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           S +++ L+   R     +  E    I     +FP ++ DL+Y    QT      +++R +
Sbjct: 163 SFDDRILKASSRFEKFGSGDEQEIDIRRGIELFPTVNVDLMYGFKGQTPDSVVTDIKRLI 222

Query: 196 SYAVDHLSLYQLTIEKG 212
               D ++ Y LT+  G
Sbjct: 223 QLEPDQITTYPLTLGIG 239


>gi|75763929|ref|ZP_00743563.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488586|gb|EAO52168.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 176

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 8/177 (4%)

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           G L LP E+    +Y +       HG + YEISN S    +S HNL YW   +Y G G G
Sbjct: 4   GKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFSKGDNKSRHNLTYWNNEEYYGFGAG 63

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           AHS V  G     +   K    +   + + G   ++   ++ +++ +E L +GLR  +G+
Sbjct: 64  AHSYVN-GERIQNVGPLKQ---YFNKIDETGFPYLDVHVVTEKEKMEEELFLGLRKTKGV 119

Query: 342 SVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           S   ++      +D    + L   Q QG +E      +R T++G  + + V  +  +
Sbjct: 120 SKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-GYVRLTRKGKLLGNEVFQSFLI 175


>gi|218670254|ref|ZP_03519925.1| coproporphyrinogen III oxidase [Rhizobium etli GR56]
          Length = 240

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++ FGGGTP++++PQ  + ++  +   +T  ++  + +E +P ++         + GV
Sbjct: 7   VKTVHFGGGTPTIMKPQEFSALMAKLRSAFTFEADAGVAVEIDPRTLAAPMIDALAENGV 66

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTM 184
           +R SLGVQS +      + R  +  +   A + L  +    ++FDLIY LPKQT+
Sbjct: 67  DRASLGVQSFDPVVQAAINRLQSFEQTETAVVGLRSSGVSSINFDLIYGLPKQTV 121


>gi|270488043|ref|ZP_06205117.1| coproporphyrinogen dehydrogenase [Yersinia pestis KIM D27]
 gi|270336547|gb|EFA47324.1| coproporphyrinogen dehydrogenase [Yersinia pestis KIM D27]
          Length = 331

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 20/234 (8%)

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
           + +++    + E +IE +P  +E++     R  G NR+S+GVQ   ++  R + R  +  
Sbjct: 4   LREHFDFLPDAEQSIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDED 63

Query: 156 EAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              A I  A+ + F   + DLIY LPKQT   +   L+R      D LS++       +L
Sbjct: 64  FIFALIARAKALGFNSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYA-HLPSL 122

Query: 215 FYKMHKDGDLVLPSENVAVDLYN-----LTQSITSAHGLHAYEISNHSFLGAE---SLHN 266
           F    K  D  LP+    +D+       LT+S     G+  +   +     A+   +LH 
Sbjct: 123 FAAQRKIKDADLPTAEQRLDILQHTIRFLTESGYQFIGMDHFARPDDELAIAQQEGTLHR 182

Query: 267 LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            N+  Y      D +G+G  A S +     +     EK  E++   V + G+A+
Sbjct: 183 -NFQGYTTQGESDLLGLGVSAISMLGDSYAQN----EKDLETYYACVEQRGNAL 231


>gi|20807915|ref|NP_623086.1| RNA polymerase II complex ELP3 subunit [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516483|gb|AAM24690.1| ELP3 component of the RNA polymerase II complex, consists of an
           N-terminal BioB/LipA-like domain and a C-terminal
           histone acetyltransferase domain (only BioB/LipA-like
           domain in Thermotoga) [Thermoanaerobacter tengcongensis
           MB4]
          Length = 354

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 20/251 (7%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---G 79
           HW  C  KC +C+ N    + K V  E  I++  + ++ + + +    +   FFGG   G
Sbjct: 14  HWG-CSFKCVFCNQNLITGQKKDVTVEEVIETIESHLKTIPEGS---EVEVSFFGGSFTG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
            P  IE QN+ L    IA+ +     ++ I +   P  +     +  +K  V+ I LGVQ
Sbjct: 70  IP--IEKQNLYL---SIAREYLKRGQIQGIRLSTRPDYITEEILENLKKHDVSVIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+E+  L    R H + + + A++L R    ++   L+  LP  T  +      + +S  
Sbjct: 125 SMEDDVLEKSRRGHTSEDVVNAVNLIRRYDFKLGLQLMIGLPGDTEEKSLNTAHKIVSLK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + + T   KM+K+G     S   A+++      I    G+    I     
Sbjct: 185 PDFVRIYPTLVIRNTYLEKMYKEGKYTPLSLEQAINISKKMYIIFVKAGIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+N+
Sbjct: 240 -GLQTTDNINF 249


>gi|203284554|ref|YP_002222294.1| HemN-related protein [Borrelia duttonii Ly]
 gi|201083997|gb|ACH93588.1| HemN-related protein [Borrelia duttonii Ly]
          Length = 379

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 20/272 (7%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           F +    E+ +  ++ G   + +++       L++   +   L  ++  +      E T 
Sbjct: 23  FYEKVFRELSYYLEVLGFPKVKTLYIKYNDLRLVDVFELKSFLTSLSAKFNFFDLDEFTF 82

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG-------RNHNASEAIAAIHL 163
           E +P ++  +         V+RISL ++S   + L  +G       + + A E I   H 
Sbjct: 83  ELHPGNITTSVLTVLDNFFVSRISLDIKSFSSKFLEKIGIFGVSIDKVNAAIENIHQFHF 142

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             NI     FD+   +     T  + +L + +SYA +H+SL ++ I+K         D  
Sbjct: 143 DLNI----DFDI--NILYHNKTNLKSDLVKVISYAPEHISLSEVLIDKNNCIVDSSSDA- 195

Query: 224 LVLPSENVAV---DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGP 280
               S+   +   DL+        +HG   YEISN +  G E  HN+ YW    Y+G+G 
Sbjct: 196 ---YSDYNDIRGEDLWFYAFDFLESHGYLNYEISNFALRGYEGKHNVRYWELSPYLGLGL 252

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            A S + V  +    ++ +  +++L  V  + 
Sbjct: 253 QAVSLLFVSENNGLRAVIRKDDNFLYSVESSA 284


>gi|219684253|ref|ZP_03539197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii PBr]
 gi|219672242|gb|EED29295.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii PBr]
          Length = 377

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFS------------IFNKILEELKYYLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   ++   E T+E  P  V+   F+   +  + RI+LGVQ
Sbjct: 54  VDFCLCRQDSLKFIFTSLSKCINLALLEEFTLEIIPGYVDFEKFKLLDEFFITRINLGVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L +NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLKFRKIMGIPEISYEKMNI--LIKNIRKFPFDLNIDMTINIPFQKKSDLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+        +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYIPEHICFSDFICEEQD---PALRDFDNGIGSEK----LWFYALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
               G ES HN   W    Y+G+G  A S
Sbjct: 225 FMLKGHESKHNKLNWELKPYLGLGLHAVS 253


>gi|167040356|ref|YP_001663341.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914440|ref|ZP_07131756.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307724324|ref|YP_003904075.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166854596|gb|ABY93005.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|300889375|gb|EFK84521.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307581385|gb|ADN54784.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
          Length = 354

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 17/246 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPSLI 84
           C  KC +C+ NS   + +   E +++   T    ++ L     I   FFGG   G P   
Sbjct: 17  CPFKCVFCNQNSITGQQQEITEEYVRQ--TIETHLKTLPSNAEIEVSFFGGSFTGIPQ-- 72

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + QN+ L   GIAK +     ++ I +   P  ++    Q  ++  V+ I LGVQS++E+
Sbjct: 73  DKQNLYL---GIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQSMDEE 129

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H + + +  ++L R    ++   ++  LP   + +      + +    D + 
Sbjct: 130 VLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELKPDFVR 189

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y   + K T   +M+K+G     +   AV++      I   + +    I      G ++
Sbjct: 190 IYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI------GLQT 243

Query: 264 LHNLNY 269
             N+NY
Sbjct: 244 TENINY 249


>gi|256546119|ref|ZP_05473472.1| oxygen-independent coproporphyrinogen III oxidase 2
           (coproporphyrinogenase) (coprogen oxidase) [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398236|gb|EEU11860.1| oxygen-independent coproporphyrinogen III oxidase 2
           (coproporphyrinogenase) (coprogen oxidase) [Anaerococcus
           vaginalis ATCC 51170]
          Length = 435

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 97/207 (46%), Gaps = 8/207 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
              +Y++ PFC ++C YC + + V      ++N    FL  ++ + Q+  P+ + +I+ G
Sbjct: 126 DFNLYINIPFCPQRCRYCSYPTIVSN--TVEKNLYVDFL--LKEISQINLPKKLDTIYLG 181

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPS +  +++  IL  I + +  +   E T+EA    +++      +++  V RISL 
Sbjct: 182 GGTPSNLSVKDLDRILSLINEKFIFN---EFTLEAGREDTLDFEKLDLFKEKNVGRISLN 238

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            Q+     L  + R  +    I     A+ +   ++ D I  L  +    +    +    
Sbjct: 239 PQTFSVNVLENINRAIDLENFIRIYDYAKKLGIIVNMDFIVGLYGENRESFSKNFEILKK 298

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              D+++ + L  + G+ +++ + +G+
Sbjct: 299 LEPDNITFHALAQKVGSKYFEENINGN 325


>gi|319940965|ref|ZP_08015302.1| hypothetical protein HMPREF9464_00521 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805538|gb|EFW02333.1| hypothetical protein HMPREF9464_00521 [Sutterella wadsworthensis
           3_1_45B]
          Length = 490

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM---RQLTGPRSISSIFFGG 78
           VH PFC  KC  C    H  + ++    +  + + EM  W     Q   P  I ++ FGG
Sbjct: 77  VHAPFCESKCDGCGCWQHAYK-ELESRRWADALVREMAAWADTHAQAGAP--IQALRFGG 133

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +EP +I  +L    +   +S++  I ++A          +     GV R  L V+
Sbjct: 134 GTPSALEPVDILHVLAKARQYLPLSNDCSIELQARVHGFSEEKIEAALAGGVTRFVLPVR 193

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--------FDLIYALPKQTMTQWEME 190
           S   +  +  GR  +A EA      A  +  R++         +L + LP Q++  W  +
Sbjct: 194 SFSTEVRQAAGR-LDAGEA------AEKLLKRLTEYNESAVAVELNFGLPGQSLEVWTAD 246

Query: 191 LQRALSYAVDHL 202
           L+RA    +D L
Sbjct: 247 LERACQLPLDGL 258


>gi|326566585|gb|EGE16730.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC1]
          Length = 69

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 38/57 (66%)

Query: 19 LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
          L +Y+H P+CVKKCPYCDFNSH    +V  EN+I++ L++    + L   R I ++F
Sbjct: 13 LSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNRQIDTVF 69


>gi|254464128|ref|ZP_05077539.1| coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacterales
           bacterium Y4I]
 gi|206685036|gb|EDZ45518.1| coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacterales
           bacterium Y4I]
          Length = 372

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 80/157 (50%), Gaps = 2/157 (1%)

Query: 51  FIQSFLTEMQWMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
           +++    E+  +RQ L    ++S + +GGGTP+L+  + I  +   +   + ++   E +
Sbjct: 4   YVEVLKAEIALLRQQLPDGITLSRLHWGGGTPTLLSAEQIRDLAAAVTGAFPLAPYAEFS 63

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIF 168
           +E +P+ V         +AG+NR S+GVQ  +    + +GR  +      AI + R +  
Sbjct: 64  VEIDPNEVGDRRLDALAQAGMNRASVGVQDFDSTIQQAIGRIQSFETTKQAIDMLRAHGV 123

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             ++ D+++ LP QT  +    +Q+ LS   D +++Y
Sbjct: 124 GSLNADILFGLPHQTPERMTESVQKLLSLTPDRVAVY 160


>gi|187918512|ref|YP_001884075.1| coproporphyrinogen oxidase, anaerobic [Borrelia hermsii DAH]
 gi|119861360|gb|AAX17155.1| coproporphyrinogen oxidase, anaerobic [Borrelia hermsii DAH]
          Length = 379

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 8/238 (3%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           F    L E+    ++ G   I +++    T       N+   L  ++KN+   +  E T 
Sbjct: 23  FFNKILHELSCCLEVLGFPKIKTLYIKYETLGFGNDANLESFLTSLSKNFDFVTLDEFTF 82

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E +P  +  +         V+RISL V+S   + LR LG    +  ++  +++A +   +
Sbjct: 83  ELHPGEITPSLLTILNDFSVSRISLDVKSFSSKFLRILGA---SWISVGRVNIAVDNIHK 139

Query: 171 MSFDLIYAL----PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
             FDL   L    P Q     + +L + ++ A +H+ L ++ +++     ++ K+     
Sbjct: 140 FDFDLNIDLSINIPYQEKMHLKSDLVKVIACAPEHICLSEVLVDEENCNIELFKEVSCNY 199

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
             E  A   +        + G   YEISN +  G ES HN  YW    Y+G+G  + S
Sbjct: 200 -DEAKAEYFWFYALDFLESSGYINYEISNFALKGHESKHNARYWALKPYLGLGINSVS 256


>gi|255029378|ref|ZP_05301329.1| coproporphyrinogen III oxidase [Listeria monocytogenes LO28]
          Length = 141

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
           S++   ++Y+L  +    HG   YEISN +  G +S HN+ YW    Y G G GAH  V 
Sbjct: 1   SQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVG 60

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              +     I+K    +++ +++N     +++ L+ +++ +E + +GLR  +G+  K ++
Sbjct: 61  NTRYSNFGPIKK----YMEPLQENILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFK 116

Query: 348 MLAGRNLDIECERNLQRQ 365
              G++LD      +Q+Q
Sbjct: 117 QKFGQDLDATFANAIQKQ 134


>gi|330991356|ref|ZP_08315307.1| Oxygen-independent coproporphyrinogen-III oxidase
           [Gluconacetobacter sp. SXCC-1]
 gi|329761375|gb|EGG77868.1| Oxygen-independent coproporphyrinogen-III oxidase
           [Gluconacetobacter sp. SXCC-1]
          Length = 455

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 2/193 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISS 73
            S  + +Y+H PFC   C +C  N+ V R    +  +    L E+  +  + GP R IS 
Sbjct: 46  ASQPVSLYLHVPFCDTLCRFCGCNTAVLRNADARAAYGALLLEELHRIVAIIGPQRRISH 105

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+ +    +  ++  I +N+ +  + EI+IE +P  +         + G NR 
Sbjct: 106 LQWGGGTPTTLPTGTMRRVMQAIRQNFIILPDAEISIEVDPRHLPPAYPALLHELGFNRA 165

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ L+       GR  +  +    +   R      ++ DLIY LP+Q         +
Sbjct: 166 SMGVQDLDPDVQEACGRIQSWEQTRDCLDALRAAGVNAINIDLIYGLPRQDTAGVARTAR 225

Query: 193 RALSYAVDHLSLY 205
              S   D L+++
Sbjct: 226 AVASLRPDRLAVF 238


>gi|84517091|ref|ZP_01004447.1| Coproporphyrinogen III oxidase, oxygen-independent (HemN)
           [Loktanella vestfoldensis SKA53]
 gi|84508986|gb|EAQ05447.1| Coproporphyrinogen III oxidase, oxygen-independent (HemN)
           [Loktanella vestfoldensis SKA53]
          Length = 449

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFF 76
           + VY+H PFC + C +C   +         EN+++       +       G R +  + +
Sbjct: 51  VSVYIHIPFCERLCWFCACATQGTSTLKPVENYLRVVQLELALLARALPAGIR-MGQMHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   +      S +   ++E +P+ V+        K G+ R S+G
Sbjct: 110 GGGTPTILPPAMIRDLAQAVKAVIPPSDHFSFSVEIDPTLVDDAKIAMLAKMGMTRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q         +GR  + +     +   R      ++ DL+Y LP QT  +    + +  
Sbjct: 170 IQDFAPDVQAAIGREQSFAATKTCVDSLRAAGITSLNADLVYGLPHQTQPKLADTIAQVR 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           S   D ++L+       T   +     D  LP E    D Y L Q    A
Sbjct: 230 SLDPDRIALFGYA-HVPTFSKRQKLIPDAALPKEE---DRYALAQQAARA 275


>gi|327188958|gb|EGE56149.1| coproporphyrinogen III oxidase [Rhizobium etli CNPAF512]
          Length = 362

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 70/137 (51%), Gaps = 1/137 (0%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  +   + G
Sbjct: 18  SVGDVHFGGGSPTIMPSADFLSLMELLRGRFAIERGATIAVEVDPRTFTTDMAEALERTG 77

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP QT+    
Sbjct: 78  VNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQTVQSCL 137

Query: 189 MELQRALSYAVDHLSLY 205
                A++   D L+++
Sbjct: 138 ESAMLAIAMRPDRLAVF 154


>gi|148265179|ref|YP_001231885.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146398679|gb|ABQ27312.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 351

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  KC +CD       V  +  G E      L ++   R     RS+   F+GG   +L 
Sbjct: 15  CPHKCVFCDQVKIAGAVGEFPTGTE-----ILAKIASYRDSGRCRSVGVAFYGGTFTALS 69

Query: 85  EPQNIALI--LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                 L+  L  +  +  V S   I +   P ++++   Q  R+ GV  + LGVQS+ +
Sbjct: 70  PAVQEGLLKPLQPLVASGEVGS---IRVSTRPDAIDLQTVQFLREMGVKTVELGVQSMAD 126

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             L   GR H +++   A  + R     +   L+  LP  T  +    L R ++   D L
Sbjct: 127 DVLDLAGRGHTSADVARASRMLREAGLALGAQLMPGLPGDTSEKAMDSLARVIALQPDFL 186

Query: 203 SLYQLTIEKGTLFYKMHKDG 222
            +Y   +  GT     ++ G
Sbjct: 187 RIYPTLVIAGTKLADFYEIG 206


>gi|288871649|ref|ZP_06118400.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
 gi|288862633|gb|EFC94931.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
          Length = 87

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC KKC YCDF S     ++ +E +    L E++          I +IF GG
Sbjct: 7   LEIYVHIPFCAKKCAYCDFLSFPGNMRMRRE-YTDKLLEEIRIQSSFVREYQIDTIFLGG 65

Query: 79  GTPSLIEPQNIALILDGIAKNW 100
           GTPS+++  +I  I+  + +++
Sbjct: 66  GTPSVLDAADITAIMGALKEHY 87


>gi|325677950|ref|ZP_08157592.1| radical SAM domain protein [Ruminococcus albus 8]
 gi|324110504|gb|EGC04678.1| radical SAM domain protein [Ruminococcus albus 8]
          Length = 415

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 12/253 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +++ ++V    C  KC +CD N+   + K+  ++ ++     MQ + Q+         FF
Sbjct: 3   SNISIFVPHVGCPHKCAFCDQNAITGKQKLPHKDDVEKAC--MQALSQVDDISDTEIAFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GG   ++  P++  L L   AK +      + I I   P  +        +  GV  I L
Sbjct: 61  GGSFTAI--PRDYMLELLTAAKKFVGGGRFKGIRISTRPDYINAEILDILKSYGVTAIEL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS+ ++ L    R H+A +   A  L R     +   ++  L K    Q +      +
Sbjct: 119 GAQSMSDEVLEANERGHSAEDVRQASRLIREYGFELGLQMMVGLYKSGHQQEDETFNEIM 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL-------VLPSENVAVDLYNLTQSITSAHGL 248
           +   D + +Y + I K T   K+   G+        VL     A+  +          GL
Sbjct: 179 AIRPDTVRIYPVVILKNTRLAKLLASGEYKPMSFEEVLSLSTRALGAFTAAGIRVIKCGL 238

Query: 249 HAYEISNHSFLGA 261
           HA EI     +G 
Sbjct: 239 HASEIVEQDMVGG 251


>gi|300854470|ref|YP_003779454.1| hypothetical protein CLJU_c12840 [Clostridium ljungdahlii DSM
           13528]
 gi|300434585|gb|ADK14352.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 355

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---QWMRQLTGPRSISSIF 75
           + ++V    C   C +CD     +    G E  + +  T     Q+++ +    S+  + 
Sbjct: 6   IPIFVPNEGCPHNCVFCD-----QTAITGNEEKVDACFTRNTINQYLKTIKRENSVVEVS 60

Query: 76  FGGGTPSLI--EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNR 132
           F GGT + I  E QN  L    +AK +    +++ I +   P  ++ +     +   V+ 
Sbjct: 61  FFGGTFTAIPMERQNELL---SVAKEYKDRGDIDLIHMSTRPDYIDKSILDNLKSYSVDV 117

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQSL E+ L   GR H+A + + A  L +     +   ++  LP  T  +    ++
Sbjct: 118 IELGVQSLNEEVLIKSGRGHSAEDVVKASSLIKEYGFTLGHQIMLGLPSDTFEKDMETVK 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           R++    D   LY   + KGT    M+K G     + + AVD+
Sbjct: 178 RSVLMNPDIYRLYPALVIKGTFMETMYKKGVYKPYTLDEAVDI 220


>gi|218678613|ref|ZP_03526510.1| coproporphyrinogen III oxidase [Rhizobium etli CIAT 894]
          Length = 244

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 72/137 (52%), Gaps = 1/137 (0%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  +   + G
Sbjct: 18  SVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEALERTG 77

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
           VNR S+GVQS +    + + R  + ++ + A+ +L  +   R++FDL++ LP QT+    
Sbjct: 78  VNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLHGVRRINFDLMFGLPNQTVQSCL 137

Query: 189 MELQRALSYAVDHLSLY 205
                A++   D L+++
Sbjct: 138 ESAMLAIAMRPDRLAVF 154


>gi|212697460|ref|ZP_03305588.1| hypothetical protein ANHYDRO_02030 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675544|gb|EEB35151.1| hypothetical protein ANHYDRO_02030 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 165

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 19/165 (11%)

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           +++ VD+++         GL  YEISN +  G ES+HN  YW   DYI  G GA   +  
Sbjct: 3   DDLEVDIFSFLVDELDKLGLKRYEISNFARFGKESIHNKKYWNIDDYIAFGLGASGFLSN 62

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-E 347
             +    +  K+     K +R+  + +V ++F+  +++  E+++  LR   GI++ ++ E
Sbjct: 63  KRYNNTRNFVKYD----KAIREARYPIVFEDFIDKDEREKEYIIFKLRESSGINLLEFKE 118

Query: 348 MLAGRNLDIECERNLQRQGFIERVQ---FSRLR----CTQRGMTM 385
             A       C+  ++ +  IE+ +   F +L      T++GM++
Sbjct: 119 KFA-------CDFLVKYKDVIEKFKDQDFYKLDDNFYFTKKGMSL 156


>gi|218458183|ref|ZP_03498274.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 241

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 70/137 (51%), Gaps = 1/137 (0%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+  + FGGG+P+++   +   +++ +   + +     I IE +P +   +  +   + G
Sbjct: 18  SVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAIEVDPRTFTTDMAEALERTG 77

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP QT+    
Sbjct: 78  VNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQTVQSCL 137

Query: 189 MELQRALSYAVDHLSLY 205
                A++   D L+++
Sbjct: 138 ESAMFAIAMRPDRLAVF 154


>gi|308051418|ref|YP_003914984.1| coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
 gi|307633608|gb|ADN77910.1| Coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
          Length = 444

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 127/295 (43%), Gaps = 36/295 (12%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   C +C F+  + + +  +  FI S   EM+  + L        ++ GGGT
Sbjct: 62  LYMHVPFCHTLCSFCTFHRFLFKEEKARAYFI-SLRKEMEMAKALG--YDFEELYIGGGT 118

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNV-----EITIEANP---SSVEVNNFQGYRKAGVNR 132
            +        +++D +A+    + N+     +++ E++P   +S E     G     V+R
Sbjct: 119 TT--------VLVDELARTIEHARNLFPGIKQVSCESDPLHLTSAEFTQLHGL----VDR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +S+GVQS     L    R     E       +  A++ FP ++ D+I+    QT    + 
Sbjct: 167 LSVGVQSFNRDILARTDRLEKFGEPEVVYEKLLRAKDNFPILNVDMIFGFQGQTEEVLQN 226

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++          ++ Y L +   T   +    G+L    +++  D   +  S+      H
Sbjct: 227 DMDMLTRLGPRQITTYPLMVTHQT---RKSAKGNLAAADQDIRKDYELILNSLKG----H 279

Query: 250 AYEISNHSFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             +++  SF G  +    + +   Y DY+G+G G+ S +    +  + S+ ++ E
Sbjct: 280 YDQLTAWSF-GKSNEEGFDEYVVNYDDYLGLGSGSFSFLHDTLYVNSFSLRRYQE 333


>gi|325849469|ref|ZP_08170764.1| HemN C-terminal domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480125|gb|EGC83199.1| HemN C-terminal domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 165

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 19/147 (12%)

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YEISN +    ES+HN  YW   DYI  G GA   +    +    +  K+     K
Sbjct: 21  GLKRYEISNFAKASKESIHNKKYWNIDDYIAFGLGASGFLSNKRYNNTRNFVKYD----K 76

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECERNLQRQ 365
            +R+  + +V +EF+  +++  E+++  LR  EGI+++++ E  A       C+  ++ Q
Sbjct: 77  AIREARYPIVFEEFIDKDEREKEYIIFKLRESEGINLREFKEKFA-------CDFLVKYQ 129

Query: 366 GFIERVQ---FSRLR----CTQRGMTM 385
             IE+ +   F +L      T++GM++
Sbjct: 130 DVIEKFKDQDFYKLDDNFYFTKKGMSL 156


>gi|229839869|ref|ZP_04460028.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229696235|gb|EEO86282.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. PEXU2]
          Length = 408

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 153/405 (37%), Gaps = 76/405 (18%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++       TV                      
Sbjct: 99  LFTGRQVSQMHWGGGTPTYLNKTQISHLM-------TV---------------------- 129

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
                               LR + R  +     A I  A+ + F   + DLIY LPKQT
Sbjct: 130 --------------------LRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 169

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-----L 238
              +   L+R      D LS++       +LF    K  D  LP+    +D+       L
Sbjct: 170 PESFAFTLKRVAELNPDRLSVFNYA-HLPSLFAAQRKIKDADLPTAEQRLDILQHTIRFL 228

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           T+S     G+  +   +     A+   +LH  N+  Y      D +G+G  A S +    
Sbjct: 229 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 287

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 288 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 343

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           G         D E     ++ G +ER + + LR T RG  ++ ++
Sbjct: 344 GIRFADYFAEDFELLAPFEQDGLVERNE-TGLRVTPRGRLLIRNI 387


>gi|297619665|ref|YP_003707770.1| histone acetyltransferase, ELP3 family [Methanococcus voltae A3]
 gi|297378642|gb|ADI36797.1| histone acetyltransferase, ELP3 family [Methanococcus voltae A3]
          Length = 553

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 29/199 (14%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-V 106
           QENFI+  L  M                 G  + +L E Q I         N T S   V
Sbjct: 184 QENFIKGCLDAMN----------------GVISETLEEAQKI---------NETASHRCV 218

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
            +TIE  P   +  +     K G  R+ LG+QS  ++ L F+ R H+ SE+I A    +N
Sbjct: 219 ALTIETRPDYCKEEHVNEMLKLGATRVELGIQSTYDEILDFVKRGHSVSESIKATSRLKN 278

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              ++S+ +I  LP  T    +  ++R  +   +  D +  Y   + +GT  Y + K G+
Sbjct: 279 SGLKVSYHIIPGLPHTTEEMDKENIRRVFNNPEFKPDLIKFYPCLVIEGTELYDLWKKGE 338

Query: 224 LVLPSENVAVDLYNLTQSI 242
               ++  AV+L    +SI
Sbjct: 339 YKPITDEEAVELITYGKSI 357


>gi|294687|gb|AAB07743.1| coproporphyrinogen III oxidase [Rhizobium etli]
          Length = 251

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 70/137 (51%), Gaps = 1/137 (0%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  +   + G
Sbjct: 6   SVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEALERTG 65

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP QT+    
Sbjct: 66  VNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQTVQSCL 125

Query: 189 MELQRALSYAVDHLSLY 205
                A++   D L+++
Sbjct: 126 ESAMLAIAMRPDRLAVF 142


>gi|284123339|ref|ZP_06386921.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829261|gb|EFC33668.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 140

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)

Query: 48  QENFIQSFLT----EMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQNIALILDGIAKNWT 101
           +E  +Q+FL     E+    +  G R I   +I+FGGGTP+ +  Q++  IL  I + + 
Sbjct: 5   REKRVQTFLDGLEQELCLYARDVGLRKIPVHTIYFGGGTPTTLPSQDLIGILHAIRRWFL 64

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           V  + E+++E +P +V     +  R+AG  R+S+G QS ++  L  LG
Sbjct: 65  VEDDAEVSVEVHPGTVTAEALRALRQAGFTRLSVGGQSFDQTELLELG 112


>gi|303244754|ref|ZP_07331084.1| histone acetyltransferase, ELP3 family [Methanothermococcus
           okinawensis IH1]
 gi|302484888|gb|EFL47822.1| histone acetyltransferase, ELP3 family [Methanothermococcus
           okinawensis IH1]
          Length = 453

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 13/145 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P   + N      K G  R+ LGVQ++    L ++ R H   ++I A  L +
Sbjct: 119 VALTVETRPDYCKENEINQMLKLGTTRVELGVQTIYNDILYYVKRGHTVEDSIKATQLLK 178

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--------DHLSLYQLTIEKGTLFYK 217
           +   ++S+ ++  LPK +      EL + + Y +        D + +Y   + KGT  Y 
Sbjct: 179 DSGLKVSYHIMPGLPKSS-----KELDKKVFYEIFNNPDFKPDLIKIYPCLVIKGTELYD 233

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSI 242
           + K G+    ++  AV+L    +SI
Sbjct: 234 LWKKGEFKPITDEEAVELITYAKSI 258


>gi|163733958|ref|ZP_02141400.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
 gi|161393069|gb|EDQ17396.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
          Length = 372

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 1/137 (0%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+S + +GGGTP+L E   I  +   I+    ++ + E ++E +P+ ++ +       AG
Sbjct: 24  SLSRVHWGGGTPTLFEAAMIEDLAGSISDVAPLAPHGEFSVEVDPNEIDQSRVDALAAAG 83

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNAS-EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           + R S+GVQ  + +    +GR  +      AA  L  +    ++ D+++ LP QT  +  
Sbjct: 84  MTRASIGVQDFDVEIQTTIGRLQSFDVTRYAADMLRASGIKSLNTDILFGLPHQTTEKIA 143

Query: 189 MELQRALSYAVDHLSLY 205
             +Q+ L+ + D ++LY
Sbjct: 144 ASVQKLLTLSPDRVALY 160


>gi|218512256|ref|ZP_03509096.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 131

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++ FGGGTP+++ PQ    ++  +   +   ++  + +E +P ++     +   + GV
Sbjct: 16  VKNVHFGGGTPTIMRPQEFTALMAKLRSAFAFEADAGVAVEIDPRTLAAPMIEALAENGV 75

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTM 184
           +R  LGVQS +      + R  +  +   A + L  +    +++DLIY LPKQT+
Sbjct: 76  DRARLGVQSFDPVVQAAINRLQSFEQTETAVVGLRSSGVSSINYDLIYGLPKQTV 130


>gi|150015571|ref|YP_001307825.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902036|gb|ABR32869.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 436

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 125/283 (44%), Gaps = 33/283 (11%)

Query: 21  VYVHWPFCVKKCPYCDFN-----SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +YVH PFC  KC +C F+     + + +YK      I+++ ++ ++++ L     ++ I 
Sbjct: 47  IYVHIPFCDSKCAFCGFDKVKNTNEIPKYKDRIIEEIENYASK-EYIKNL----RVNVIH 101

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAGVNRIS 134
            GGGTP+++       IL+ I + + V+ ++ + IE + +++  +    Y ++  ++++S
Sbjct: 102 IGGGTPTILPKDVFNEILNTIKEKFNVTDDLIVNIEGSATTIYKDEVIEYIKENNISKVS 161

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL------ARNIFPRMSFDLIYALPKQTMTQWE 188
           +GVQ+   Q LR     + +   +  ++L      + NI      D++Y  P   +   +
Sbjct: 162 VGVQTF-NQKLR---DQYKSKATLDEVYLTLSKLKSNNI--TTGIDIMYGFPDFKIGDVK 215

Query: 189 M----ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +++ A+   VD +   Q+      L  K  +D  L  P+    VD+      +  
Sbjct: 216 EITFNDIREAIRLGVDAIDFGQMYPFCNNL-EKRVEDEKLGFPNLEELVDIITTVNKMME 274

Query: 245 AHGL-----HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
             G      + Y   +   L  E+ +        D I +G GA
Sbjct: 275 EAGYEQKASYGYTKKDKDILVMETAYYGGIHNVPDCIALGSGA 317


>gi|300786982|ref|YP_003767273.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
 gi|299796496|gb|ADJ46871.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
          Length = 477

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 7/198 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQ-WMR---QLTGPRS 70
           S  + ++ + P C  +C +C +   + + K+ +  +++   + E + W+     L G   
Sbjct: 73  SGPIHLWSYIPTCAYRCRFCQYPVVLVKGKIEKAADWVDLNIAEARLWLDAVPHLAG-AE 131

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +      GGTPSL+    I  +L+    ++  +    I  E +PS+      +  R+ G 
Sbjct: 132 VGEFNVFGGTPSLLPEPEIRRLLEFYRAHFGFTDRTTIRFEGDPSTFTPAKLELLRELGC 191

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            ++S GVQS ++  L   GR H A   +  +  A    F  +S DL+Y L  QT+     
Sbjct: 192 TKLSSGVQSFDDHVLELCGREHTAQMCVDFVRNATAAGFEWVSIDLMYGLLDQTLDSVRR 251

Query: 190 ELQRALSYAVDHLSLYQL 207
           +L   L   V  +   +L
Sbjct: 252 DLDVVLENEVTAVVCTKL 269


>gi|218507687|ref|ZP_03505565.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
          Length = 289

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 1/137 (0%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+  + FGGG+P+++   +   +++ +     +     I +E +P +   +  +   + G
Sbjct: 1   SVGDVHFGGGSPTIMPSADFLSLMELLRGFVALERGATIAVEVDPRTFTTDMAEALERTG 60

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
           VNR S+GVQS +    + + R  + ++ + A+ +L  +   R++FDL++ LP QT+    
Sbjct: 61  VNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLHGVRRINFDLMFGLPNQTVQSCL 120

Query: 189 MELQRALSYAVDHLSLY 205
                A++   D L+++
Sbjct: 121 ESAMLAIAMRPDRLAVF 137


>gi|3913820|sp|P95506|HEMN_PASHA RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1685093|gb|AAC44662.1| HEMN [Mannheimia haemolytica]
          Length = 146

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 52/96 (54%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K C +C  N  + R++   E ++     E++    L   R ++ I +G 
Sbjct: 51  LSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRLVTQIHWGR 110

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
           GTP+ ++    A ++  +  N+ VS + EI+IE +P
Sbjct: 111 GTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDP 146


>gi|312904054|ref|ZP_07763222.1| hypothetical protein HMPREF9512_01805 [Enterococcus faecalis
          TX0635]
 gi|310632530|gb|EFQ15813.1| hypothetical protein HMPREF9512_01805 [Enterococcus faecalis
          TX0635]
          Length = 93

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 5/77 (6%)

Query: 22 YVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
          Y+H PFC   C YCDFN   + +  GQ  + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 19 YIHIPFCEHICYYCDFN---KVFLEGQPVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 75

Query: 80 TPSLIEPQNIALILDGI 96
          TP+ +  + + ++L G+
Sbjct: 76 TPTSLSAKQLDVLLKGV 92


>gi|111224661|ref|YP_715455.1| oxygen-independent coproporphyrinogen III oxidase [Frankia alni
           ACN14a]
 gi|111152193|emb|CAJ63923.1| hypothetical protein; putative oxygen-independent
           coproporphyrinogen III oxidase [Frankia alni ACN14a]
          Length = 484

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 27/214 (12%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV----------RRYKVGQENF 51
           ++L+   + +       L  Y+  P C  +C +C + + +          R  +    N 
Sbjct: 62  RFLADLADQLADTAPIHLWSYI--PTCSYRCRFCQYPTVLIAGEPAVAADRAARWVDLNI 119

Query: 52  IQSFLTEMQWMRQL----TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
            ++ L    W+ ++      P    ++F  GGTPSL+    I  +L    +++  + +  
Sbjct: 120 AEARL----WLDRVPTLAAAPVGEFNVF--GGTPSLLPASAIRRLLGFYREHFGFTPDTA 173

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I  E +PSS+     +   + GV ++S GVQS +++ L   GR H  +  +  +  A+ +
Sbjct: 174 IRFEGDPSSLTAEKLETLAELGVTKLSCGVQSFDDRVLAQSGRPHTGARCVEFVRDAQRL 233

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            F  +S DL+Y L  QT+      ++R L+  VD
Sbjct: 234 GFAWISVDLMYGLLDQTVDS----VRRDLAVVVD 263


>gi|186474671|ref|YP_001863642.1| coproporphyrinogen dehydrogenase [Burkholderia phymatum STM815]
 gi|184198630|gb|ACC76592.1| Coproporphyrinogen dehydrogenase [Burkholderia phymatum STM815]
          Length = 479

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/218 (20%), Positives = 100/218 (45%), Gaps = 12/218 (5%)

Query: 4   LSAYENNMTG--QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--- 58
           L+A+ ++M    + +N + ++ + P C  +C +C + + +   +      +   L +   
Sbjct: 56  LAAFLDDMERDIKQANQIHLWSYIPTCRYRCHFCQYPTLILNPQATSSQAVFRDLVDYNI 115

Query: 59  ---MQWMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
                W++ +       +      GGTPSL+    +  ++D    ++ +S    +  E  
Sbjct: 116 KEATMWLQNVPCLAQAEVGEFNIFGGTPSLLPEPELRRLMDFYQGHFNLSV-ATMRFEGE 174

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMS 172
           P ++     +  ++ G  +IS G Q+  ++ +   GR H+A + + AI  AR I F  ++
Sbjct: 175 PGTLTKQYLRLLKELGFTKISFGAQAFNDRIISACGRMHSAEQCLDAIFNAREIGFDWVN 234

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            DLIY +  Q +   + ++++ L   + H+   +L +E
Sbjct: 235 VDLIYGMLGQNVDDVKYDIEKTLELELSHVVCTKLHME 272


>gi|150402748|ref|YP_001330042.1| ELP3 family histone acetyltransferase [Methanococcus maripaludis
           C7]
 gi|150033778|gb|ABR65891.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           C7]
          Length = 541

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P            K G  R+ LG+QS  ++ L F+ R H    +I A  L +
Sbjct: 208 VALTLETRPDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ LI  LPK T    +  ++      ++  D +  Y   +  GT  Y++ + G
Sbjct: 268 DSGLKVSYHLIPGLPKTTPKMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSG 327

Query: 223 DLVLPSENVAVDLYNLTQSI 242
           + +  ++  AV++    +SI
Sbjct: 328 EFIPMTDEQAVEVITYGKSI 347


>gi|289425685|ref|ZP_06427456.1| coproporphyrinogen III oxidase domain protein [Propionibacterium
           acnes SK187]
 gi|289153904|gb|EFD02598.1| coproporphyrinogen III oxidase domain protein [Propionibacterium
           acnes SK187]
          Length = 117

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 1/117 (0%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       L R L
Sbjct: 1   MQSASPGVLQVLERAHTPGRAFDAAREARAAGFEHVNLDMIYGTPTETDDNVRETLDRVL 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              VDH+S Y L +E GT   +    G L  P E+V    Y +  S   + G   YE
Sbjct: 61  ETGVDHVSAYSLIVEDGTRMARKVNKGILPAPDEDVLARRYEMISSTLESEGFEWYE 117


>gi|222100438|ref|YP_002535006.1| hypothetical protein CTN_1464 [Thermotoga neapolitana DSM 4359]
 gi|221572828|gb|ACM23640.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 319

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C K+C +CD      + KV   + I       Q + + +       + F G
Sbjct: 4   IPVFLPYAGCRKRCVFCDQVKATGQVKVPSLDDIA------QLIEEYSKTSKEYELGFYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  Q +   L  + +   V S   I I   P  V V   +  +K  V  I +GVQ
Sbjct: 58  GTFTGLSEQKMEEYLSFVRRFPVVKS---IRISTRPDEVTVEKLEILKKYDVETIEVGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L + +  R+S  L+  LPK +     +   R +   
Sbjct: 115 SFSDEVLEASKRGYTSDEAEKACKLIKKMGFRLSVHLMVGLPKSSREGEILSALRTIECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M +           A+D+ +    I    G+    I  H
Sbjct: 175 ADLVRIHPTLVFEGTELHRMMEASQYSPLDLEEAIDICSDLVCILEGWGVRVIRIGYH 232


>gi|325115481|emb|CBZ51036.1| putative radical SAM domain containing protein [Neospora caninum
           Liverpool]
          Length = 825

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 123/323 (38%), Gaps = 76/323 (23%)

Query: 20  GVYVHWPFCVKKCPYCDFN----SHVRRYKVGQENFIQSF------LTEMQWMRQLTGPR 69
            VY+H PFC+K+C +C F         RY  G  +              +      + PR
Sbjct: 108 AVYIHMPFCMKRCHFCAFPVTLLPATPRYPPGSGSRPPDSQPRTGNFCSLSTKHDSSEPR 167

Query: 70  SIS-------------------SIFFGGGTPSLIEP---QNIALILDGIAKNWTVSSNVE 107
           + S                   SI+FGGG+PSLI P   Q +  +L+  A +   S+   
Sbjct: 168 TTSFRQGRCRDVSADLSKSFFRSIYFGGGSPSLIPPRLLQRVLAVLETEAHSLERSTTRG 227

Query: 108 IT---------IEANPSSVEV--------NNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           +          ++ NP S  +         + +   + GV R S+GVQ+ ++  L+ LGR
Sbjct: 228 VPSSAVACRGRVQPNPLSTRLCIGTIDSKEHLEELAELGVTRFSVGVQTFDDTILKRLGR 287

Query: 151 NHNASEAIAAIHLARNI---FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH-LSLYQ 206
           +++ +  +  + L   I   + R    L  +       Q   +L   LS+ V H    Y+
Sbjct: 288 SNDRAANVRVLRLLSEIVREYARRGRKLSVSTDILLSFQRRDQLLEDLSWLVHHEFEHYE 347

Query: 207 LTIEKGTLFYKM-HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
           ++      F ++ H + +   P +             T  +     EI      G   LH
Sbjct: 348 ISS-----FARIDHHNDNSSYPKD-------------TCDNVFKRQEIEQ----GYRCLH 385

Query: 266 NLNYWRYGDYIGIGPGAHSRVKV 288
           +  YWR   + G G GA S V +
Sbjct: 386 HEAYWRSEPFFGFGMGASSFVNL 408


>gi|134046858|ref|YP_001098343.1| ELP3 family histone acetyltransferase [Methanococcus maripaludis
           C5]
 gi|132664483|gb|ABO36129.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           C5]
          Length = 541

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P            K G  R+ LG+QS  ++ L F+ R H    +I A  L +
Sbjct: 208 VALTLETRPDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++S+ LI  LPK T  + + E  + +    ++  D +  Y   +  GT  Y++ + 
Sbjct: 268 DSGLKVSYHLIPGLPK-TTPELDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQS 326

Query: 222 GDLVLPSENVAVDLYNLTQSI 242
           G+    ++  AVD+    +SI
Sbjct: 327 GEFDPMTDEKAVDVITYGKSI 347


>gi|256830729|ref|YP_003159457.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579905|gb|ACU91041.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 344

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 54/118 (45%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +   P  V+  + +  R +GV+ I LGVQS     L   GR ++ + A  A  + R
Sbjct: 104 VHLRVSTRPDRVDAESLRRLRGSGVSMIELGVQSFSSAVLATSGRGYDGAVAAGACDMVR 163

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                +   L+  LP      W  +++R L+ A D + +Y   + +GT    ++  G+
Sbjct: 164 AAGLELGIQLLPGLPGHDAPLWREDVRRTLALAPDVVRIYPCVVVRGTGLAALYDRGE 221


>gi|156937134|ref|YP_001434930.1| radical SAM domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566118|gb|ABU81523.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 384

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 23/211 (10%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTE 58
           K LS+    M  +G  SL  Y+H PFC   C +C    H  R+   ++    + +  + +
Sbjct: 25  KLLSSPGTPMRPEGRVSL--YLHVPFCRSLCKFC----HFVRFPYSEDLASKYFKKLIKD 78

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           ++     +G  ++  ++ GGG+PS  +P+ +  ++D +   W      +I++E +P  V 
Sbjct: 79  VE-EAHSSGVEAV-EVYVGGGSPS-SKPEALGELVDLVWSLW----RPQISVEVHPVDVA 131

Query: 119 -VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLI 176
            +   +      V R+S+GVQS   + L+ LGR  +      AI + ++  F   + D++
Sbjct: 132 FLGAAEHLDPKKVTRVSMGVQSFSPEGLKKLGRPVSPETNELAIEILKSKKFKTFNVDVV 191

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + L   T      +  +AL    D ++ Y L
Sbjct: 192 WGLEDPT-----PDAVKALECGADQVTFYPL 217


>gi|330722452|gb|EGH00289.1| Coproporphyrinogen III oxidase2C oxygen-independent [gamma
           proteobacterium IMCC2047]
          Length = 252

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHL 163
           E +IE +P  + V+     R+ G NRIS+G+Q  +    + + R ++    SE + AIH 
Sbjct: 17  EYSIEIHPGQMSVDTIPVLREIGFNRISMGIQDFDADVQKAVNRFNSVAEVSELMDAIH- 75

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            R  F  +S DLIY LP QT+   +  L++ +    D LSL+
Sbjct: 76  -REGFHSVSMDLIYGLPMQTLDTLKKTLEQTIELNPDRLSLF 116


>gi|52548601|gb|AAU82450.1| histone acetyltransferase [uncultured archaeon GZfos17F1]
          Length = 575

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 11/162 (6%)

Query: 69  RSISSI-FFGGGTPSLIEPQNIALILDG---IAKNWTVS-SNVEITIEANPSSVEVNNFQ 123
           RSIS++  FGG     +  Q+I   LD    IA N T +  N+ IT E  P  +      
Sbjct: 207 RSISAMNDFGGAG---VADQDIDADLDIKSIIATNETAAVRNIGITFETRPDHLSTMEIN 263

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              + G  ++ +GVQS+ ++ L  + R H   +AIAA    R+   ++ F ++  LP   
Sbjct: 264 RLLEMGATKVEVGVQSIYDRVLEKIDRGHTVQDAIAANKRLRDSGLKVGFHIMVGLPGSD 323

Query: 184 MTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
            +      +   S   +  DHL +Y   + +GT+ ++  KDG
Sbjct: 324 ASDDLSMFKTLFSDPLFCPDHLKIYPTLVTEGTVLHRWWKDG 365


>gi|159905477|ref|YP_001549139.1| ELP3 family histone acetyltransferase [Methanococcus maripaludis
           C6]
 gi|159886970|gb|ABX01907.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           C6]
          Length = 541

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 5/141 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P            K G  R+ LG+QS  ++ L F+ R H    +I A  L +
Sbjct: 208 VALTLETRPDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGIDASIKATQLLK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++S+ LI  LPK T  + + E  + +    ++  D +  Y   +  GT  Y++ + 
Sbjct: 268 DSGLKVSYHLIPGLPK-TTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQS 326

Query: 222 GDLVLPSENVAVDLYNLTQSI 242
           G+ +  ++  AV++    +SI
Sbjct: 327 GEFIPMNDEQAVEVITYGKSI 347


>gi|254519217|ref|ZP_05131273.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
 gi|226912966|gb|EEH98167.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
          Length = 344

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 5/208 (2%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           CP+ C F +  R  KV QE   +  + E   ++++ +    S   I F GGT + I    
Sbjct: 17  CPHQCVFCNQDRIAKVVQEEVTERDVRETVDEYLKTIDHKNSTVEISFFGGTFTAINVNK 76

Query: 89  IALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              +L  +AK +     ++ I +   P ++        +   V+ I LGVQSL+++ LR 
Sbjct: 77  QKELL-AVAKEYKEKGYIDKIRMSTRPDAINKYILDYLKDYKVDIIELGVQSLDDEVLRL 135

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            GR H+A E   A  L +     +   ++  LP  T  +    +++++    D   +Y  
Sbjct: 136 SGRGHSAEEVEKASKLIKEYGITLGHQIMPGLPGDTFEKDIETVKKSIKMKPDICRIYPS 195

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            + K T    M++ G     S   AVD+
Sbjct: 196 LVIKDTPMADMYERGQYKPYSLEEAVDI 223


>gi|254502879|ref|ZP_05115030.1| hypothetical protein SADFL11_2918 [Labrenzia alexandrii DFL-11]
 gi|222438950|gb|EEE45629.1| hypothetical protein SADFL11_2918 [Labrenzia alexandrii DFL-11]
          Length = 398

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRK 127
           R IS+++FGGGT S++ P  I  IL  +   +   ++ E+T E    S+    + +  R 
Sbjct: 29  RRISALYFGGGTASVLTPAMIERILTKLTDTFRFEADAEMTFEGECRSLSRRGYLEEVRN 88

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN----IFPRMSFDLIYALP 180
            G  R+S GVQ+++E     L    N   ++A + L R     +F  +  D IY  P
Sbjct: 89  FGFRRVSFGVQTMDETFREIL----NLKPSVADLGLLRGRAEALFDEVCIDFIYGWP 141


>gi|118580197|ref|YP_901447.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118502907|gb|ABK99389.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 352

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 69  RSISSIFFGG---GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           R +   FFGG     P  I+ Q +   +    ++  VSS   I +   P +++  N    
Sbjct: 54  RPLEVAFFGGTFTALPRQIQ-QRLLAAVHPFLRSGVVSS---IRVSTRPDALDAENVPWL 109

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              GV  I LGVQS+++  L   GR H+A  ++ AI   R         LI  LP  T  
Sbjct: 110 AGQGVAIIELGVQSMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLIPGLPGDTPA 169

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                L+R +   VD + +Y   + +GT   + + +G
Sbjct: 170 TACASLERVIDAGVDFVRIYPTVVLRGTELARRYGEG 206


>gi|296109137|ref|YP_003616086.1| histone acetyltransferase, ELP3 family [Methanocaldococcus infernus
           ME]
 gi|295433951|gb|ADG13122.1| histone acetyltransferase, ELP3 family [Methanocaldococcus infernus
           ME]
          Length = 534

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 10/243 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P            K G  R+ LGVQS+  + L+   R H+  + I A  L +
Sbjct: 202 VALCIETRPDYCSEKEINQMLKLGATRVELGVQSIYNEILKLCKRGHSVEDTIKATQLLK 261

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ L+  +P  ++   +   +   +   +  D + +Y   + +GT  Y+M K G
Sbjct: 262 DSGLKVSYHLMPGMPGSSIEMDKKMFKEIFTNPDFMPDMVKIYPCLVIEGTELYEMWKRG 321

Query: 223 DLVLPSENVAVDLYNLTQSITSA---HGLHAYEISNHSFLGAESLHNLN--YWRYGDYIG 277
           +     E  A+++ +  +SI            +I     +      NL    ++Y +  G
Sbjct: 322 EFKPYREEEAIEVISYAKSIMPKWVRTSRIQRDIPATVIVDGVKKSNLGELVYKYMEKKG 381

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           +        +VG       I   PE  +K+VR++  A    E FLS E   ++ L+  LR
Sbjct: 382 LRCRCIRCREVGHVYYKKGILPDPEH-IKLVREDYEASGGTEIFLSFEDVKNDILIAFLR 440

Query: 337 LRE 339
           LR+
Sbjct: 441 LRD 443


>gi|330940667|gb|EGH43685.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 442

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 3/138 (2%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ 
Sbjct: 8   VEQLHLGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREADWSTMGLLREL 67

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +
Sbjct: 68  GFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPTQNPQIF 127

Query: 188 EMELQRALSYAVDHLSLY 205
              + + +    D LS++
Sbjct: 128 SHTVDKVIDLQPDRLSVF 145


>gi|253699691|ref|YP_003020880.1| radical SAM protein [Geobacter sp. M21]
 gi|251774541|gb|ACT17122.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 343

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 3/195 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +CD    V     G     +      ++  +  G R + + F+GG T + +   
Sbjct: 14  CPHRCVFCD-QEKVAGASGGLPAPAELVARVAKYAEKARG-RDLEAAFYGG-TFTALPRA 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +L+ +       +   + +   P SVE +     +  GV  + LGVQS++ + LR 
Sbjct: 71  DQERLLNPLQPLLAQGALKRLRVSTRPDSVEADTANFLKSFGVATVELGVQSMDAEVLRL 130

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            GR H+A++  +A+   +     +   L+  LP  +  +    L R L+ +   L +Y  
Sbjct: 131 SGRGHDAADVESAVAALKKAGIEVGIQLMPGLPGDSPPRSLDSLSRVLALSPSFLRIYPT 190

Query: 208 TIEKGTLFYKMHKDG 222
            +  GT   +M+  G
Sbjct: 191 LVISGTELSRMYTAG 205


>gi|268323296|emb|CBH36884.1| putative histone acetyltransferase ELP3 [uncultured archaeon]
          Length = 518

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 3/141 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N  +T E  P   +V         G  ++ LGVQ +  + L  + R H+  ++IAA    
Sbjct: 188 NTGMTFETRPDYAKVGEIDRMLAMGATKVELGVQQVNNKILEHIDRGHSVEDSIAANSSV 247

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F L+  LP  +    +    R     ++  D+L +Y   + KGT  Y   K 
Sbjct: 248 RDSALKVGFHLMPGLPGSSPEADKEMFDRIFYDSNFKPDYLKIYPTLVVKGTQLYDQWKK 307

Query: 222 GDLVLPSENVAVDLYNLTQSI 242
           GD V   E+ A+++    + I
Sbjct: 308 GDYVPLCEDEAIEIIAYAKRI 328


>gi|45359140|ref|NP_988697.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           S2]
 gi|45048015|emb|CAF31133.1| Histone acetyltransferase [Methanococcus maripaludis S2]
          Length = 540

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P            K G  R+ LG+QS  ++ L F+ R H    +I A  L +
Sbjct: 208 VALTLETRPDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ LI  LPK T    +  ++      ++  D +  Y   +  GT  Y++ + G
Sbjct: 268 DSGLKVSYHLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSG 327

Query: 223 DLVLPSENVAVDLYNLTQSI 242
           +    ++  AV++    +SI
Sbjct: 328 EFNPMTDEQAVEVITYGKSI 347


>gi|221640156|ref|YP_002526418.1| Coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacter
           sphaeroides KD131]
 gi|221160937|gb|ACM01917.1| Coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacter
           sphaeroides KD131]
          Length = 371

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/295 (20%), Positives = 120/295 (40%), Gaps = 29/295 (9%)

Query: 51  FIQSFLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
           +  +  +E+  +R    P   ++ + +GGGTP+L+ P  I  +   I       +  + +
Sbjct: 4   YAAALKSELALLRARLAPGVRLARMHWGGGTPTLLPPTLIHELALAIRDAVPSDAETDFS 63

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +E +P+ ++        +AG+ R+S+GVQ  +    + +GR  +       +   R+   
Sbjct: 64  VEIDPTEIDSARLDALFEAGMTRVSIGVQDFDPLIQQSIGREQSFELTQRLVEDLRHRGL 123

Query: 170 R-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R +  D++Y LP QT       +Q+ LS + D +++       G           L++P+
Sbjct: 124 RGLDADILYGLPHQTAPGVADSIQKLLSLSPDRVAVL------GYAHVPAVSRRQLMIPT 177

Query: 229 ENVA-----VDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-------NLNYWRYGD-- 274
            ++      +DL+   +++    G     + + +  G    H         ++  Y D  
Sbjct: 178 ASIPGPEERLDLFETARTLILWDGYQQVGLDHFARAGDPLAHAHACGRLRRSFQGYTDDR 237

Query: 275 ---YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
               IG+G  A SR   G  + A S   H    L+ +R    +      LS E +
Sbjct: 238 AEVLIGLGASAISRFPQGFTQNAPSTSDH----LRAIRSGRFSTARGHVLSDEDR 288


>gi|256811090|ref|YP_003128459.1| histone acetyltransferase, ELP3 family [Methanocaldococcus fervens
           AG86]
 gi|256794290|gb|ACV24959.1| histone acetyltransferase, ELP3 family [Methanocaldococcus fervens
           AG86]
          Length = 536

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 5/141 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P            K G  R+ LGVQ++  + L F  R H   + I A  L +
Sbjct: 204 VALCVETRPDYCGEKEINQMLKLGATRVELGVQTIYNEILEFCKRGHTVEDTIKATQLLK 263

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++S+ L+  +P   M + + ++ R +     +  D + +Y   + KGT  Y+M K 
Sbjct: 264 DSGLKVSYHLMPGMPGSDM-EMDKKMFREIFENPDFKPDMVKIYPCLVVKGTELYEMWKR 322

Query: 222 GDLVLPSENVAVDLYNLTQSI 242
           G+     E  A+++ +  +SI
Sbjct: 323 GEYRPYREEEAIEIISYAKSI 343


>gi|91201666|emb|CAJ74726.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 356

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 9/220 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +++ +++    C  +C +C+       Y + Q   I+  +   Q++  +   R I+  FF
Sbjct: 27  SNIPIFIPELACPHQCVFCNQAKISGTYSIPQPKEIRHIVA--QYLETIPENRIINIAFF 84

Query: 77  GG---GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GG   G P  ++ Q +     G  KN  VS    I +   P  +     +  +K GV  I
Sbjct: 85  GGSFTGIPVDLQEQYLKEAY-GFVKNGKVSG---IRLSTRPDYINETILELLKKYGVTTI 140

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG QS  ++ L   GR H   +   A  + R     +   ++  LP+ +  +       
Sbjct: 141 ELGAQSTSQKVLNQSGRGHTREDIQNASRMIRTYGFELGLQMMIGLPEDSYKRSIQTAND 200

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            +S+   +  +Y   I KGT   K +++G  +  S   AV
Sbjct: 201 IVSFGARNTRIYPAIIVKGTALEKRYREGKYIPLSLEQAV 240


>gi|268608882|ref|ZP_06142609.1| ELP3 component of the RNA polymerase II complex [Ruminococcus
           flavefaciens FD-1]
          Length = 360

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 92/234 (39%), Gaps = 6/234 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +++ +++    C  KC +CD N+      +   N ++   T  + + ++  P      FF
Sbjct: 4   SNISIFIPHIGCPHKCSFCDQNTISGAQHLPDGNEVREICT--KALSEVKSPEDTEIAFF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GG   ++  P++  L L   A  +        I     P  +        +  GV  I L
Sbjct: 62  GGSFTAI--PRDYMLELLEAAHEFVGEGKFRGIRCSTRPDCINNEVLSLLKTYGVTAIEL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS+ ++ L    R H A +   A  L R     +   ++  L K T       +++ L
Sbjct: 120 GAQSMSDKVLEANERGHTAEDVFNASRLIRQYGFELGLQMMIGLYKSTGDDEYETMEKIL 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGL 248
               D + +Y + I +GT   ++ K G+  L    N   + Y+    +  A G+
Sbjct: 180 EIHPDTVRIYPVVILRGTRLAELLKSGEYQLFGGANDEREYYDFDDVVDVAAGM 233


>gi|284048720|ref|YP_003399059.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952941|gb|ADB47744.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 332

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 13/232 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISSIF 75
           L +++    C   C +C+     +R   G+ +   S     + M  L G   P   + + 
Sbjct: 3   LPIFIPHAGCPHLCSFCN-----QRTISGEGD--SSLAGARRQMENLLGWVRPDPANELA 55

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GG+ + ++P     +LD +A+ W        + +   P ++        R   V  I 
Sbjct: 56  FYGGSFTALDPDRQEALLD-LAETWRGQGLCGPLRLSTRPDAITPEILDRLRAHQVETIE 114

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG QSL+++ L    R H A++   A  L R    R+   L+  LP Q     E    + 
Sbjct: 115 LGAQSLDDRVLELARRGHTAAQVRTASRLIRQGGFRLGLQLMTGLPGQDGPSLEDTKAQV 174

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSA 245
           L+   D + +Y + + +GTL     + G     +   AVD  + L +  T+A
Sbjct: 175 LALHPDLVRIYPVLVIEGTLLADQWRQGAYRPQTVEEAVDACWPLYRDFTAA 226


>gi|237506936|gb|ACQ99219.1| coproporphyrinogen oxidase-related protein [Tragopogon dubius]
 gi|291481028|gb|ADE06491.1| porphyrin oxidoreductase [Tragopogon porrifolius]
          Length = 111

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 41/65 (63%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPSL+ P+ +A +LD +   + +  + EI++E +P + +    +     GV
Sbjct: 47  LETVFFGGGTPSLVPPRLVAKVLDTLRSKFRLCLDAEISMEMDPGTFDAQKLKDLMGLGV 106

Query: 131 NRISL 135
           NR+SL
Sbjct: 107 NRVSL 111


>gi|222055247|ref|YP_002537609.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221564536|gb|ACM20508.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 358

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 5/196 (2%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C+    +   K GQ       LT++   R+  G R +   +FGG   +L  P+
Sbjct: 14  CPHQCVFCN-QMEIAGTK-GQMPGQTEILTKVAAYRRSGGCRPVQVAYFGGTFTAL--PR 69

Query: 88  NIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                L    +   VS  VE I I   P  V+V   Q  R  GV  + LG+QS+ ++ L 
Sbjct: 70  ADQERLLQPLQPLLVSGEVESIRISTRPDCVDVETAQFLRGMGVRVVELGIQSMADEVLE 129

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             GR H A+    A  + R         L+  LP  +  +    L+R ++     L +Y 
Sbjct: 130 MSGRGHAAAHVERAASVLRQAGLLWGAQLMPGLPGDSPAKAMASLERVIALEPSCLRIYP 189

Query: 207 LTIEKGTLFYKMHKDG 222
             + K T    + + G
Sbjct: 190 TLVIKDTPLASLFEQG 205


>gi|139439603|ref|ZP_01773016.1| Hypothetical protein COLAER_02043 [Collinsella aerofaciens ATCC
           25986]
 gi|133774944|gb|EBA38764.1| Hypothetical protein COLAER_02043 [Collinsella aerofaciens ATCC
           25986]
          Length = 209

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
           V P E+      ++ +    A G H YE+++++  G E  HN+ YW    Y+G+G  A  
Sbjct: 8   VEPDEDFQASCMDVARERLGAAGYHPYEVASYALDGHECAHNIAYWTGQGYLGLGRSAAG 67

Query: 285 RVKVGS-HRVA---ISIEKHPESW-LKMVRKNGHAVV-EKEFLSSEQQADEFLMMGLRLR 338
            +      R+A     +    +S+ +++V+++  A   E E+LS  + A E LM+  R+ 
Sbjct: 68  MLDAEDFDRLAGLFPGVSSRGDSYRVRLVQRDDDATAFEAEYLSQREAAAEDLMLSCRMT 127

Query: 339 EGIS----VKDWEMLAGRNLDIECERNLQ 363
            G++    V+   ++    L   C+R L+
Sbjct: 128 GGVASDLLVRAARVIPADELTAACDRALE 156


>gi|312149478|gb|ADQ29549.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi N40]
          Length = 377

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLHAVS 253


>gi|188588502|ref|YP_001920586.1| radical SAM superfamily protein [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498783|gb|ACD51919.1| radical SAM superfamily protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 340

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 100/218 (45%), Gaps = 4/218 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +       +   + ++  + E  +++ +T   +I  + F G
Sbjct: 8   IPIFVPQEGCPHKCVFCNQDRITGLKDIVTTDIVRKTIDE--YLKTITNKEAIIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GT + ++ +     L+ IAK +     ++ I +   P +++       ++  V+ I LGV
Sbjct: 66  GTFTAVKEEKQRAFLE-IAKGYKDKGLIDKIRLSTRPDAIDNYILTYLKEYKVDIIELGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR H  S+   A  L +     +   ++  LP  T  +  +  + ++  
Sbjct: 125 QSLDDEILKRSGRGHYVSDVEKASALIKQYGFVLGHQIMPGLPGDTFEKDILTTKLSIKM 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             D   +Y   + K T   KM+K G  +  S + AV++
Sbjct: 185 KPDICRIYPALVIKDTPMEKMYKMGTYIPYSLDEAVEI 222


>gi|317052121|ref|YP_004113237.1| hypothetical protein Selin_1954 [Desulfurispirillum indicum S5]
 gi|316947205|gb|ADU66681.1| conserved hypothetical protein [Desulfurispirillum indicum S5]
          Length = 309

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + ++I   P  ++   ++  + Y++ G    +  GVQSL+E+SL F+ R H+   A+ AI
Sbjct: 117 IGLSIGTRPDCMDHERLDLLESYQRRGCELWVEYGVQSLKEESLEFIRRGHDVDTALRAI 176

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
              R    ++   +I+ LP +++ +    ++R     +D + ++ L I +GT   +M++ 
Sbjct: 177 EATRRRGIKVCAHVIFGLPTESLLESVEGVRRLGELGIDGIKIHMLHIMEGTELARMYRQ 236

Query: 222 GDLVLPS 228
              +LP+
Sbjct: 237 HPFLLPT 243


>gi|225548983|ref|ZP_03769960.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 94a]
 gi|225370586|gb|EEH00023.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 94a]
          Length = 377

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLHAVS 253


>gi|332559161|ref|ZP_08413483.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
 gi|332276873|gb|EGJ22188.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
          Length = 371

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 116/288 (40%), Gaps = 29/288 (10%)

Query: 58  EMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
           E+  +R    P   ++ + +GGGTP+L+ P  I  +   I       +  + ++E +P+ 
Sbjct: 11  ELALLRARLAPGVRLARMHWGGGTPTLLPPTLIHELALAIRDAVPSDAETDFSVEIDPTE 70

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDL 175
           ++        +AG+ R+S+GVQ  +    + +GR  +           R+   R +  D+
Sbjct: 71  IDAARLDALFEAGMTRVSIGVQDFDPLIQQSIGREQSFELTQRLTEDLRHRGLRGLDADI 130

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA--- 232
           +Y LP QT       +Q+ LS + D +++       G           L++P+ ++    
Sbjct: 131 LYGLPHQTAPGVADSVQKLLSLSPDRVAVL------GYAHVPAVSRRQLMIPTASIPGPE 184

Query: 233 --VDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-------NLNYWRYGD-----YIGI 278
             +DL+   +++    G     + + +  G    H         ++  Y D      IG+
Sbjct: 185 ERLDLFETARTLILWDGYQQVGLDHFARAGDPLAHAHACGRLRRSFQGYTDDRAEVLIGL 244

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           G  A SR   G  + A S   H    L+ +R    +      LS E +
Sbjct: 245 GASAISRFPQGFTQNAPSTSDH----LRAIRSGRFSTARGHVLSDEDR 288


>gi|257468860|ref|ZP_05632954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063110|ref|ZP_07927595.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688786|gb|EFS25621.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 346

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 11/240 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++ +++    C   C +C+    + R   V  E+  ++  T   ++  L         FF
Sbjct: 5   NIPIFISHFGCPNACVFCNQKKINGRETDVTMEDLKETIET---YLETLPKNSKKEVAFF 61

Query: 77  GG---GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GG   G    ++ Q +  + + I K         I +   P  +     +  +K GV  +
Sbjct: 62  GGTFTGISFDLQRQYLETVHEYIKKGLVDG----IRLSTRPDCINKEIVEQLKKYGVTSV 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQSL+E+ L+   R + A     A  L +     +   L+  LP+ T        ++
Sbjct: 118 ELGVQSLDEKVLKATARYYPAEVVAEACSLLKEYNIELGIQLMIGLPESTFESDFFTAEK 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL    D   +Y   + KGT   +M KDG+    S   AV+      S+  + G++   +
Sbjct: 178 ALKMNPDTARIYPTLVIKGTKMEEMFKDGEYKALSIEEAVERTRKIYSLLESSGVNVIRV 237


>gi|257464485|ref|ZP_05628857.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 107

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
           E + Q    ++++ RQ +  +S  +  +FFGGGTP++   + +  IL  + KN+  S++ 
Sbjct: 11  EEYHQYLCQQIEYYRQFSFCQSSDLDVVFFGGGTPTIYSHRQLQNILQCLQKNFHFSTSY 70

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           E+T E    ++ V   +  ++  VNR+S+G+Q+L
Sbjct: 71  EMTFETTLHNLGVEKAKLLQENAVNRLSVGIQTL 104


>gi|260168408|ref|ZP_05755219.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
          Length = 158

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
           S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ + +
Sbjct: 46  SVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAHLHW 105

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           GGGTPS++       +L  I   +    ++E  IE +P +V
Sbjct: 106 GGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTV 146


>gi|251779232|ref|ZP_04822152.1| radical SAM superfamily protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243083547|gb|EES49437.1| radical SAM superfamily protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 340

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 100/218 (45%), Gaps = 4/218 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +       +   + ++  + E  +++ +T   +I  + F G
Sbjct: 8   IPIFVPQEGCPHKCVFCNQDRITGLKDIVTTDIVRKTIDE--YLKTITNKEAIIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GT + ++ +     L+ IAK +     ++ I +   P +++       ++  V+ I LGV
Sbjct: 66  GTFTAVKEEKQRAFLE-IAKGYKNKGLIDKIRLSTRPDAIDNYILTYLKEYKVDIIELGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR H  S+   A  L +     +   ++  LP  T  +  +  + ++  
Sbjct: 125 QSLDDEILKRSGRGHYVSDVEKASALIKQYGFVLGHQIMPGLPGDTFEKDILTTKLSIKM 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             D   +Y   + K T   KM+K G  +  S + AV++
Sbjct: 185 KPDICRIYPALVIKDTPMEKMYKMGTYIPYSLDEAVEI 222


>gi|223889360|ref|ZP_03623946.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 64b]
 gi|223885046|gb|EEF56150.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 64b]
          Length = 377

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLFRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + + +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYKKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|15669323|ref|NP_248128.1| hypothetical protein MJ_1136 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496153|sp|Q58536|Y1136_METJA RecName: Full=Uncharacterized protein MJ1136
 gi|1591770|gb|AAB99138.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 541

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P            K G  R+ LGVQ++  + L F  R H   + I A  L +
Sbjct: 208 VALCIETRPDYCGEKEINQMLKLGATRVELGVQTIYNEILEFCKRGHTVEDTIKATQLLK 267

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ L+  +P   M    +   E+     +  D + +Y   + +GT  Y+M K G
Sbjct: 268 DSGLKVSYHLMPGMPGSDMEMDKKMFKEIFENPDFKPDMVKIYPCLVIEGTELYEMWKRG 327

Query: 223 DLVLPSENVAVDLYNLTQSI 242
           +     E  A+++ +  +SI
Sbjct: 328 EYKPYREEEAIEIISYAKSI 347


>gi|218249876|ref|YP_002375156.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi ZS7]
 gi|226321354|ref|ZP_03796881.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi Bol26]
 gi|218165064|gb|ACK75125.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi ZS7]
 gi|226233150|gb|EEH31902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi Bol26]
          Length = 377

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   + +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIVKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|216264897|ref|ZP_03436889.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 156a]
 gi|215981370|gb|EEC22177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 156a]
          Length = 377

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   + +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIVKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|312148280|gb|ADQ30939.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi JD1]
          Length = 377

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G +  + + +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGISEISYKKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|116754208|ref|YP_843326.1| ELP3 family histone acetyltransferase [Methanosaeta thermophila PT]
 gi|116665659|gb|ABK14686.1| histone acetyltransferase, ELP3 family [Methanosaeta thermophila
           PT]
          Length = 512

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 5/142 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P     N+ +     G  ++ LGVQS+ +  L  + R H+  E I A  L 
Sbjct: 200 NVGITFETRPDWCRENHIKNMLLLGATKVELGVQSIYDDVLSAIRRGHSVEETIRANRLL 259

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHK 220
           R    ++ F ++  LP     + ++++ R L    +Y  D+L +Y   + +GT  ++M  
Sbjct: 260 REAGLKVGFHMMPGLPGSDPDR-DLKMFRELFESSNYRPDYLKIYPTLVIEGTELHRMWI 318

Query: 221 DGDLVLPSENVAVDLYNLTQSI 242
            GD    S++ A +L +  + I
Sbjct: 319 RGDYEPLSDDEAAELISRIKEI 340


>gi|289192242|ref|YP_003458183.1| histone acetyltransferase, ELP3 family [Methanocaldococcus sp.
           FS406-22]
 gi|288938692|gb|ADC69447.1| histone acetyltransferase, ELP3 family [Methanocaldococcus sp.
           FS406-22]
          Length = 537

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P            K G  R+ LGVQ++  + L F  R H   + I A  L +
Sbjct: 204 VALCIETRPDCCGEKEINQMLKLGTTRVELGVQTIYNEILEFCKRGHTVEDTIKATQLLK 263

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ L+  +P   M   +   +   S   +  D + +Y   + +GT  Y+M K G
Sbjct: 264 DSGLKVSYHLMPGMPGSDMEMDKKMFKEIFSNPDFMPDMVKIYPCLVIEGTELYEMWKKG 323

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                 E  A+++    +SI
Sbjct: 324 LYKPYREEEAIEIIAYAKSI 343


>gi|150400714|ref|YP_001324480.1| ELP3 family histone acetyltransferase [Methanococcus aeolicus
           Nankai-3]
 gi|150013417|gb|ABR55868.1| histone acetyltransferase, ELP3 family [Methanococcus aeolicus
           Nankai-3]
          Length = 563

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 13/145 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P            K G  ++ +GVQ++    L  + R H   + I A  L R
Sbjct: 230 VALTVETRPDYCTEKEINQMLKLGATKVEIGVQTIYNDILNHIKRGHGVEDTIKATQLLR 289

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--------DHLSLYQLTIEKGTLFYK 217
           +   ++S+ ++  LP  +      EL + L Y +        D + +Y   + KGT  Y 
Sbjct: 290 DSGLKISYHIMPGLPMSS-----KELDKKLFYEIFNNPNFKPDLIKIYPCLVIKGTELYD 344

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSI 242
           +++ G+    ++N A++L    +SI
Sbjct: 345 IYERGEFKPINDNDAIELITYAKSI 369


>gi|221217853|ref|ZP_03589320.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 72a]
 gi|224533316|ref|ZP_03673910.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi CA-11.2a]
 gi|225549916|ref|ZP_03770877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 118a]
 gi|221192159|gb|EEE18379.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 72a]
 gi|224513481|gb|EEF83838.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi CA-11.2a]
 gi|225369375|gb|EEG98827.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 118a]
          Length = 377

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L  NI  FP  ++ D+   +P Q  +  + +L+  +
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELV 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLHAVS 253


>gi|195941476|ref|ZP_03086858.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi 80a]
          Length = 377

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + E +    L  NI  FP  ++ D+   +P Q  +  + +L+  +
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELV 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|187778953|ref|ZP_02995426.1| hypothetical protein CLOSPO_02548 [Clostridium sporogenes ATCC
           15579]
 gi|187772578|gb|EDU36380.1| hypothetical protein CLOSPO_02548 [Clostridium sporogenes ATCC
           15579]
          Length = 363

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 9/244 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +G   + ++V    C   C +C  N H     + ++  EN+++  +    +++ +    S
Sbjct: 3   KGHYIIPIFVAQEGCPYNCVFC--NQHKITGEKDEIIDENYVRETIE--AYIKTIDRENS 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAG 129
              + F GGT + I  +    +L  +AK +     ++ I +   P  ++       +K  
Sbjct: 59  TLEVSFFGGTFTGIPIERQKSLL-KVAKEYKDKGQIDCIHMSTRPDYIDREILDNLKKYS 117

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
            + I LGVQSL+E+ L   GR H+  E   A  L +     +   ++  LP  T  +   
Sbjct: 118 ADIIELGVQSLDEEVLLKSGRGHSVEEVYRASKLIKEYGFTLGHQIMLGLPGDTFKKDIE 177

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++++L    D   +Y   + K T    M + G     + + A+D+  +  S+    G+ 
Sbjct: 178 TVEKSLKMKPDIARIYPALVIKDTPMEYMLRKGTYKPYTLDEAIDITKILYSMYDKEGIK 237

Query: 250 AYEI 253
              I
Sbjct: 238 VIRI 241


>gi|224532364|ref|ZP_03672994.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi WI91-23]
 gi|224512671|gb|EEF83042.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi WI91-23]
          Length = 377

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + + +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYKKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|168188028|ref|ZP_02622663.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
 gi|169294131|gb|EDS76264.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
          Length = 363

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 17/265 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ N+           F++  + E  +++ +    SI  + F G
Sbjct: 9   IPIFVPHEGCPHDCVFCNQNTITGTSNKVNGKFVEETIEE--YLKTIKRENSIVEVSFFG 66

Query: 79  GTPSLI--EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GT + I  E QN  L    +AK +     ++ I +   P  ++    +  +K   + I L
Sbjct: 67  GTFTAIDVEKQNELL---TVAKKYKDMGKIDYIHLSTRPDYIDDFILENLKKYSADVIEL 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+++ L   GR H   + I A  L +     +   ++  LP  T  +     ++ +
Sbjct: 124 GVQSLDDEVLIQSGRGHTVEDVIKASKLIKKYNFVLGLQIMLGLPGDTFKKDIETTKKII 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D   +Y   + K T   KM+ + ++  P        Y L ++I     +++  ++N
Sbjct: 184 QLKPDIARIYPTLVVKDTPMEKMYIN-NIYKP--------YTLEEAIKIGKVVYSMLVAN 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGP 280
              +    L       YG  + +GP
Sbjct: 235 DINVIRVGLQPTEEINYGKELVVGP 259


>gi|15595001|ref|NP_212790.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi B31]
 gi|2688591|gb|AAC67009.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi B31]
          Length = 377

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 29/269 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+   R             L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIFNR------------ILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FP-RMSFDLIYALPKQTMTQWEMELQRAL 195
           S   +  + +G    + + +    L  NI  FP  ++ D+   +P Q  +  + +L+  L
Sbjct: 114 SFSLEFRKIVGIPEISYKKLNI--LINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELL 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SY  +H+       E+      + +D D  + SE     L+        ++G   YEI+N
Sbjct: 172 SYMPEHICFSDFICEEEGF---VLRDFDNSIDSEK----LWFCALECLESNGYINYEITN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            +  G ES HN   W    ++G+G  A S
Sbjct: 225 FALKGHESRHNKLNWELKPHLGLGLYAVS 253


>gi|255024948|ref|ZP_05296934.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL
          J1-208]
          Length = 96

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 8/83 (9%)

Query: 12 TGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
          T Q SN S  VY+H PFC   C YCDFN   + +  GQ  + ++   + EM+ +    GP
Sbjct: 18 TNQSSNESSAVYIHIPFCEHICYYCDFN---KVFLEGQPVDEYVDLLIKEME-LTAAKGP 73

Query: 69 RS-ISSIFFGGGTPSLIEPQNIA 90
           + + ++F GGGTP+ +    IA
Sbjct: 74 IAPVDTVFVGGGTPTTLNESQIA 96


>gi|304570579|ref|YP_387011.2| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 341

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 50/117 (42%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
             I     P  V+V   Q   + G++ + LG+QS    +L   GR + A  A+    + R
Sbjct: 104 TSIRCSTRPDCVDVAGLQRLHRMGLDTVELGIQSFSNDALTRSGRGYTAHTAVTGCRIVR 163

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                +   L+  LP  +   +  +++ A S   D + LY   + +GTL     +DG
Sbjct: 164 EAGLGLGIQLMPGLPGHSEGAFLRDVRTACSLGPDMVRLYPCLVFEGTLLASWWRDG 220


>gi|322420695|ref|YP_004199918.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320127082|gb|ADW14642.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 350

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 13/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C +CD      + KV     +    +  L  ++  RQ    R +   F+GG   +L
Sbjct: 15  CPHRCVFCD------QEKVAGARGVLPTPEELLARIEEYRQGAPARELEVAFYGGTFTAL 68

Query: 84  IEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
             P+     L    +       ++ + +   P +V+  + +  ++ GV  + LGVQSL+ 
Sbjct: 69  --PRRQQQDLLLPLQPLLARGALKSVRLSTRPDAVDAVDSRFLKEHGVATVELGVQSLDP 126

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + L   GR H ASE   A+   +     +   L+  LP  T  +    L RAL+     L
Sbjct: 127 EVLLLSGRGHGASEVEEAVAALKAAGIEVGIQLMPGLPGDTPERALASLHRALALKPSFL 186

Query: 203 SLYQLTIEKGTLFYKMHKDG 222
            +Y   + + T     +++G
Sbjct: 187 RIYPTLVIEETELAARYREG 206


>gi|3913809|sp|O31067|HEMN_THEVL RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|2598960|gb|AAB84028.1| oxygen independent coproporphyrinogen III oxidase
           [Thermosynechococcus vulcanus]
          Length = 325

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           + ++ + EI+IE +P  +  + F   RK G NRIS GVQ  + Q    + R    +    
Sbjct: 2   FLMTKDAEISIEVSPRYINGDYFLRGRKLGFNRISFGVQDFDPQVQLAVNRVQRETMFFQ 61

Query: 160 AIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +   R   F  ++ DLIY LP QT+  +E  + + L    D ++++
Sbjct: 62  VMEWIRAAEFESVNIDLIYGLPYQTVQSFEATIAKTLRLDPDRIAVF 108


>gi|254302542|ref|ZP_04969900.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322734|gb|EDK87984.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 348

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K++  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-MNLQKEYLEVVKHYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ LR  GRN+       +  L +N    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLRATGRNYTYDIVKKSCDLIKNYGFELGIQLMIGLPK---SDFKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           Q   ++L    D   +Y   + KGT    M+K
Sbjct: 173 QSAIKSLDLNPDIARIYPTLVIKGTELEFMYK 204


>gi|78217967|gb|ABB37316.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 309

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 50/117 (42%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
             I     P  V+V   Q   + G++ + LG+QS    +L   GR + A  A+    + R
Sbjct: 72  TSIRCSTRPDCVDVAGLQRLHRMGLDTVELGIQSFSNDALTRSGRGYTAHTAVTGCRIVR 131

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                +   L+  LP  +   +  +++ A S   D + LY   + +GTL     +DG
Sbjct: 132 EAGLGLGIQLMPGLPGHSEGAFLRDVRTACSLGPDMVRLYPCLVFEGTLLASWWRDG 188


>gi|255524264|ref|ZP_05391223.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296185385|ref|ZP_06853795.1| hypothetical protein CLCAR_0808 [Clostridium carboxidivorans P7]
 gi|255512089|gb|EET88370.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296050219|gb|EFG89643.1| hypothetical protein CLCAR_0808 [Clostridium carboxidivorans P7]
          Length = 362

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 4/211 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G+    + ++V    C   C +C+ N+           F ++ + E  +++ +    SI 
Sbjct: 2   GKNHYIIPIFVPHEGCPHNCVFCNQNTITGSSGKIDAEFTRNTIEE--YLKTIKRENSIV 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I  +     L  +AK +     ++ I +   P  ++       +   V+
Sbjct: 60  EVSFFGGTFTAISMEKQKEFL-AVAKEYKEKGFIDLIHLSTRPDYIDDEILTNLKNYSVD 118

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LGVQSL+E+ L   GR H+  + + A +L +     +   ++  LP  T  +     
Sbjct: 119 VIELGVQSLDEEVLLKSGRGHSPEDVVKASNLIKEYGFVLGHQIMLGLPGDTFEKDIETT 178

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           ++++    D   +Y   + K T   KM+K G
Sbjct: 179 KKSILMKPDIYRIYPALVIKDTPMEKMYKSG 209


>gi|213423170|ref|ZP_03356184.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 58

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQT 183
           +AGVNRIS+GVQS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT
Sbjct: 1   RAGVNRISIGVQSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQT 58


>gi|237506938|gb|ACQ99220.1| coproporphyrinogen oxidase-related protein [Tragopogon pratensis]
          Length = 111

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPS + P+ +A +LD +   + +  + EI++E +P + +    +     GV
Sbjct: 47  LETVFFGGGTPSSVPPRLVAKVLDTLRSKFGLRLDAEISMEMDPGTFDAQKLKDLMGLGV 106

Query: 131 NRISL 135
           NR+SL
Sbjct: 107 NRVSL 111


>gi|242281193|ref|YP_002993322.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242124087|gb|ACS81783.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 344

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 15/239 (6%)

Query: 23  VHWPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           V  PF  C  KC YC  +              Q    E+         + +   FFGG  
Sbjct: 21  VFMPFMGCPTKCIYCSQDRQTGTGAKTLSEIYQDIEHEIPTFFAQGNRKPLELAFFGGTF 80

Query: 81  PSL-IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            +L  E Q   ++L    K     + V  +    P  +E +     R++G++ I LG+QS
Sbjct: 81  TALPFEWQQRFILLAAKFKQKGFLTKVRCS--TRPDCIESDQILKLRESGLDMIELGIQS 138

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              + LR   RN++   AI A    R     +   L+  LP      ++ ++ + +    
Sbjct: 139 FSAEVLRRSARNYSPETAINACRTIRESGLSLGIQLLPGLPGTKRGDFQRDISQTIGLKP 198

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG-----DLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D + +Y     KGT   K++  G      L    E +A  L  L Q     H +H   I
Sbjct: 199 DAVRIYPCLTVKGTGLEKLYLAGKYTPWSLSRTEEELAPALLRLWQ-----HKIHVIRI 252


>gi|297619609|ref|YP_003707714.1| hypothetical protein Mvol_1084 [Methanococcus voltae A3]
 gi|297378586|gb|ADI36741.1| conserved hypothetical protein [Methanococcus voltae A3]
          Length = 352

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 7/150 (4%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAGV 130
           ++F   T +   P+N+  + D      TV   + ++I   P  +EV      + Y K G 
Sbjct: 130 VYFYPATNTYDTPENLKKLWDFALSYNTV---IGLSIGTRPDCLEVEKLDILETYVKQGY 186

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  I LGVQSL++++L  L R HNA++ + AI   +    ++   +I  LP +T  +   
Sbjct: 187 DIWIDLGVQSLQDKTLDLLNRKHNATDTLNAIKNCKERGIKVCGHIILGLPGETKKEMRE 246

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             +      +D L +Y L + + T   +M+
Sbjct: 247 TAELLSLIKIDALKIYPLVVIENTKLEEMY 276


>gi|237743503|ref|ZP_04573984.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229433282|gb|EEO43494.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 348

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-MNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+       +  L +N    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYDVVKKSCDLIKNYGFELGIQLMIGLPK---SDYKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           Q   ++L    D   +Y   + KGT    M+K
Sbjct: 173 QSAIKSLELNPDIARIYPTLVIKGTELELMYK 204


>gi|187933884|ref|YP_001885439.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B str. Eklund 17B]
 gi|187722037|gb|ACD23258.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B str. Eklund 17B]
          Length = 340

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 99/218 (45%), Gaps = 4/218 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +       +   + ++  + +  ++  +T   +I  + F G
Sbjct: 8   IPIFVPQEGCPHKCVFCNQDRITGLKDIVTTDIVRKTIDD--YLETITNKEAIIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GT + ++ +     L+ IAK +     ++ I +   P +++       ++  V+ I LGV
Sbjct: 66  GTFTAVKEEKQRAFLE-IAKGYKDKGLIDKIRLSTRPDAIDDYILTYLKEYKVDIIELGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR H  S+   A  L +     +   ++  LP  T  +  +  + ++  
Sbjct: 125 QSLDDEILKKSGRGHYVSDVEKASALIKQYGFVLGHQIMPGLPGDTSEKDILTTKLSIKM 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             D   +Y   + K T   KM+K G  +  S + AV++
Sbjct: 185 KPDICRIYPALVIKDTPMEKMYKMGTYIPYSLDEAVEI 222


>gi|256027059|ref|ZP_05440893.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289765043|ref|ZP_06524421.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716598|gb|EFD80610.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 348

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-MNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+       +  L +N    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYDVVKKSCDLIKNYGFELGIQLMIGLPK---SDYKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           Q   ++L    D   +Y   + KGT    M+K
Sbjct: 173 QSAIKSLELNPDIARIYPTLVIKGTELELMYK 204


>gi|85860142|ref|YP_462344.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
 gi|85723233|gb|ABC78176.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
          Length = 363

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/218 (20%), Positives = 85/218 (38%), Gaps = 3/218 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ W  C ++C +C+ +     +              +    Q  G   +   F+GG
Sbjct: 14  IPVFLPWQGCRQRCIFCNESITTGTFPAAFSEAAFEKTVTLYSENQKRGKSPVQIAFYGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
               +   +   L+   +A+ +     V+ + I   P  ++ +     R+ GV  + LG 
Sbjct: 74  TFTGMDRKEQTRLL--QLAEPYIREGRVDSLRISTRPDEIDEDLLDFLRRHGVRTVELGA 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL E+ LR   R H   +  +A+   R     +   L+  LP  +   +   + R L  
Sbjct: 132 QSLVEEVLRHSRRGHTVGDVFSAVERLRRKGFEVGIHLMMGLPGDSPQFFAATIDRTLDL 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             D + L+   + + T+   ++  G     S N AV L
Sbjct: 192 QPDTVRLHPTLVFRNTVLATLYARGQYSPLSLNEAVGL 229


>gi|331269660|ref|YP_004396152.1| bioB/LipA-like protein [Clostridium botulinum BKT015925]
 gi|329126210|gb|AEB76155.1| bioB/LipA-like protein [Clostridium botulinum BKT015925]
          Length = 365

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ NS         +NF+++ + E  +++ +    SI  + F G
Sbjct: 11  IPIFVPHEGCPHDCVFCNQNSITGSSSKVDKNFVENTIEE--YLKTINKENSIIEVSFFG 68

Query: 79  GTPSLIE--PQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GT + I+   QN  L    +AK +     ++ I +   P  ++ N  +  +    + I L
Sbjct: 69  GTFTAIDINKQNELL---SVAKRYKDLGKIDYIHLSTRPDYIDDNILRNLKDYSADVIEL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           GVQSL+++ L   GR H   + + A  L +     +   ++  LP
Sbjct: 126 GVQSLDDEVLLKSGRGHTVDDVVKASQLIKEYGFVLGLQVMLGLP 170


>gi|119872671|ref|YP_930678.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674079|gb|ABL88335.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 469

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P  V+V       + GV R+ LGVQS+ +  L  + R H  +E + A  L +
Sbjct: 140 VALTVETRPDYVDVGEVDFLLRLGVTRVELGVQSIYDDVLARVDRGHGVAEVVRATALLK 199

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + L+  LP     + ++E+ R +     +  D + +Y   +  GT  Y+  + 
Sbjct: 200 DSAYKVCYHLMPGLPGSDPDR-DLEMFREVFSNPDFMPDCVKIYPTYVVPGTRLYEEWRR 258

Query: 222 GDLVLPSENVAVDL 235
           G      E+  +DL
Sbjct: 259 GGYRSYGEDTWLDL 272


>gi|15643860|ref|NP_228909.1| hypothetical protein TM1103 [Thermotoga maritima MSB8]
 gi|4981648|gb|AAD36179.1|AE001769_9 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 317

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C K+C +CD      + KV   + I   + E       +   +   + F G
Sbjct: 4   IPVFLPYAGCKKRCVFCDQIKATGQAKVPSLDDIARIIEEY------SRTSNEYELGFYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  + +   L  + +   V S   + +   P  +     +  +K GVN I +GVQ
Sbjct: 58  GTFTGLSEEKMEEYLRFVKRFPVVKS---VRVSTRPDEINERKLKILKKYGVNVIEIGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP        +   R +   
Sbjct: 115 SFLDEVLERSKRGYTSEEAEGACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M ++G+    +   AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDVCSDLVCIFEGWGTKVIRIGYH 232


>gi|294782047|ref|ZP_06747373.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480688|gb|EFG28463.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
          Length = 342

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I  +     L+ + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  EVAFFGGTFTGISMELQKQYLE-VVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GR++N      +  L +     +   L+  LPK       M  
Sbjct: 116 TIELGIQSLDDEVLKATGRHYNYEIVKKSCDLIKKYGFTLGVQLMIGLPKSDFKSDLMSA 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            ++L    D   +Y   + KGT    M+K
Sbjct: 176 VKSLDLNPDIARIYPTLVIKGTELEFMYK 204


>gi|301119439|ref|XP_002907447.1| elongator complex protein, putative [Phytophthora infestans T30-4]
 gi|262105959|gb|EEY64011.1| elongator complex protein, putative [Phytophthora infestans T30-4]
          Length = 684

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 13/138 (9%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + IT+E  P  +     + +R+ G  R+ LG+Q  ++  L+ + R H  +EA+ A+ L R
Sbjct: 296 IGITLETRPDCITPEELRRFRRYGCTRVQLGIQHTDDAILKKINRGHTLAEAVQALKLLR 355

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL--------SYAVDHLSLYQLTIEKGTLFYK 217
           +   +    L+  LP       + E  RA+            D   +Y   I   T+  K
Sbjct: 356 DCCYKTDIHLMPNLPGS-----DPEKDRAMFDYVLHSPDLQADQWKIYPCEITPWTVIKK 410

Query: 218 MHKDGDLVLPSENVAVDL 235
            + +G  V  S++  ++L
Sbjct: 411 WYDEGSYVPYSDDKLIEL 428


>gi|294671101|ref|ZP_06735956.1| hypothetical protein NEIELOOT_02809 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307209|gb|EFE48452.1| hypothetical protein NEIELOOT_02809 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 463

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 51/114 (44%)

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD 174
           S  ++   Q    AGVNRIS+GVQ+ +    R LGR H+  EA A +     +   +  D
Sbjct: 2   SHFDMAKAQACIDAGVNRISIGVQTFDTAIRRRLGRKHSGEEAAAYLEKLGRLDAVVVAD 61

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           LI+ LP Q    W  +L+ A +  +  L  Y           +M + G    P+
Sbjct: 62  LIFGLPGQDDEVWRNDLRIAAALPLSGLDTYAFNCYPFLPINRMIEKGAFPPPA 115


>gi|254169040|ref|ZP_04875878.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|197622010|gb|EDY34587.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
          Length = 514

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 7/137 (5%)

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           A +++  AKN  +     +T+E  P            K G  R+ LG+Q++ +  L  + 
Sbjct: 179 AQLINEDAKNRCIG----LTVETRPDWFMEKEIDFALKLGATRVELGIQTVYDDILEKVK 234

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQ 206
           R H   E+I A  LA++   ++++ ++  LP  ++ +  M  +      ++  D L +Y 
Sbjct: 235 RGHTIRESILATRLAKDAGFKINYHMMPGLPGSSLERDYMAFKEIFENPNFRPDMLKIYP 294

Query: 207 LTIEKGTLFYKMHKDGD 223
             + KGT  Y+M K G+
Sbjct: 295 TLVVKGTELYEMWKKGE 311


>gi|197119570|ref|YP_002139997.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197088930|gb|ACH40201.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 342

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPS-- 82
           C  +C +CD    V     G     +      Q+  +  G R + + F+GG     P   
Sbjct: 13  CPHRCVFCD-QEKVAGASGGLPAPAELLARVAQYAEKARG-RDLEAAFYGGTFTALPRAD 70

Query: 83  ---LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
              L+ P    L+  G  K+  VS+         P SV+ +     +  GV  + LGVQS
Sbjct: 71  QERLLSPLQ-PLLAQGALKSLRVSTR--------PDSVDADTASFLKSFGVATVELGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ + LR  GR H+A+   +A+   +     +   L+  LP  +  +    L R L+ + 
Sbjct: 122 MDAEVLRLSGRGHDAASVESAVAALKEADIEVGIQLMPGLPGDSPARSLNSLSRVLALSP 181

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
             L +Y   +  GT   +M++ G
Sbjct: 182 SFLRIYPTLVISGTELSRMYEAG 204


>gi|317485297|ref|ZP_07944177.1| hemN protein [Bilophila wadsworthia 3_1_6]
 gi|316923423|gb|EFV44629.1| hemN protein [Bilophila wadsworthia 3_1_6]
          Length = 299

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 7/151 (4%)

Query: 66  TGPRSISSIFFGG---GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           T  R I   F+GG     P  ++ + +AL +   AK   +   V  +    P ++  +  
Sbjct: 12  TASRPIELAFYGGTFTALPERLQMECLALAMQ--AKEKGIVCRVRCS--TRPDALRPDRL 67

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           Q  R AG++ + LG+QS   ++L    R +N   A     L +    ++   L+  +P  
Sbjct: 68  QALRHAGLDLVELGIQSFHTEALLDAQRGYNGDRAREGCRLIKESGLKLGIQLLPGMPGS 127

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           T  ++  +++ AL+++   L  Y   +  GT
Sbjct: 128 TPQRFSEDVEEALAFSPSCLRFYPCLVVDGT 158


>gi|313896981|ref|ZP_07830528.1| coproporphyrinogen dehydrogenase family protein [Selenomonas sp.
          oral taxon 137 str. F0430]
 gi|312974428|gb|EFR39896.1| coproporphyrinogen dehydrogenase family protein [Selenomonas sp.
          oral taxon 137 str. F0430]
          Length = 130

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 20 GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------SISS 73
          GVYVH P+CVKKC YCDF S        +E    +     + MR  T P        + +
Sbjct: 9  GVYVHIPYCVKKCAYCDFASASMGGDTAREQEQYAAALRAEIMR--TAPPLFARFGDVVT 66

Query: 74 IFFGGGTPSLIEPQNIALILDGIAK 98
          ++FGGGTP+ +     A +L GI +
Sbjct: 67 VYFGGGTPTALP----AHLLTGIIR 87


>gi|170289492|ref|YP_001739730.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|170176995|gb|ACB10047.1| Radical SAM domain protein [Thermotoga sp. RQ2]
          Length = 317

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C ++C +CD      + KV   + I   + E       +   +   + F G
Sbjct: 4   IPVFLPYAGCKRRCVFCDQIKATGQTKVPSLDDIARIIEEY------SRTSNEYELGFYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  + +   L  + +   V S   I +   P  +     +  +K GVN I +GVQ
Sbjct: 58  GTFTGLSEEKMEEYLRFVKRFPVVKS---IRVSTRPDEINERKLKILKKYGVNVIEIGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP        +   R +   
Sbjct: 115 SFLDEVLERSKRGYTSEEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M ++G+    +   AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDICSDLVCIFEGWGTKVIRIGYH 232


>gi|308048378|ref|YP_003911944.1| hypothetical protein Fbal_0658 [Ferrimonas balearica DSM 9799]
 gi|307630568|gb|ADN74870.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
          Length = 311

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 4/138 (2%)

Query: 101 TVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASE 156
            VS  V I +   P  V    +    GY++ G+   + LG+Q+  + +L+ + R H+ + 
Sbjct: 111 AVSDIVGICVGTRPDCVPDEVLALLAGYQQQGMEVWLELGLQTANDSTLKKINRGHDFAA 170

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
               +  AR    ++   LI  LP +T    E  LQ+ L+   D L L+ L + +G++  
Sbjct: 171 YADTVARARLYGLKVCTHLILGLPGETPADAEQTLQQVLAVGTDGLKLHPLHVVEGSIMA 230

Query: 217 KMHKDGDLVLPSENVAVD 234
           K  + G L L  ++  +D
Sbjct: 231 KQWRAGRLALWDQDTYMD 248


>gi|291288905|ref|YP_003505721.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290886065|gb|ADD69765.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 343

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L V++ +  C  +C YC  N H R   V   N I S     Q    L+     + + F G
Sbjct: 6   LPVFITFAGCTSRCVYC--NQH-RITGVRPSNVISS--ARQQISECLSMDAKWTELAFYG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ S + P  I   L  +AK   +++   +    +P  +         + GV  I LGVQ
Sbjct: 61  GSFSCL-PDGIRSELYKLAKETGINT---LRFSTSPDCINQKILDESVRNGVKTIELGVQ 116

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL++  L+   R + ASE  AA    +         L+  L K+    +   + RA+   
Sbjct: 117 SLDDTVLKANKRPYLASECEAAFAHVKTAVEHAGIQLMTGLYKEDFNSFAKTVDRAVMMR 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            D+  +Y   + + T    + + G+ V
Sbjct: 177 ADYARIYPTVVIEETELADLWRTGEYV 203


>gi|325983644|ref|YP_004296046.1| Coproporphyrinogen dehydrogenase [Nitrosomonas sp. AL212]
 gi|325533163|gb|ADZ27884.1| Coproporphyrinogen dehydrogenase [Nitrosomonas sp. AL212]
          Length = 481

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 5/189 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFF 76
           SL +YV  PFC   C Y   N  + R K   + ++   L +++   QL      +  I+F
Sbjct: 87  SLDLYV--PFCWPLCLYYHSNQILSREKASIKTYLDYLLRDIRLQGQLFKDDTKVEQIYF 144

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GGT  L + Q ++ + + I + + +    +  IE     +   + Q   K G N   +G
Sbjct: 145 KGGTTFLSDAQ-LSKLTEEIKRYFNLIEGGDFCIEITAQPLTNCSMQALNKMGFNSAVVG 203

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           V  L+ Q+     R  +    +  I  + R  F  +  +  Y LP Q + ++   L + +
Sbjct: 204 VHDLDHQTNHSKQRIRSEESIVQTICDIRRAGFKSLRVEFSYGLPGQNLDEFANALLKII 263

Query: 196 SYAVDHLSL 204
           +   D + L
Sbjct: 264 ATHPDQIKL 272


>gi|323141210|ref|ZP_08076111.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414353|gb|EFY05171.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 336

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 60/126 (47%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + +   P  ++    Q  +  GV  + LGVQSL+++ L    R H A++   A+ L +  
Sbjct: 89  VRLSTRPDYIDEERLQLLQCHGVRLVELGVQSLDDRVLAAAERGHTAAQVAPAVALLKRF 148

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
             ++   L+  +P+Q+    +  +++A++   D   +Y L + KGT     +  G  V  
Sbjct: 149 GFQVGLQLMVGMPEQSFDSVQETVRKAIAMQPDVARIYPLLVIKGTPLAADYAAGRFVPL 208

Query: 228 SENVAV 233
           ++  AV
Sbjct: 209 TQEEAV 214


>gi|307297607|ref|ZP_07577413.1| Radical SAM domain protein [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916867|gb|EFN47249.1| Radical SAM domain protein [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 371

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 13/225 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S Y  +M     N + ++V    C  +C +C+  S      V  E  I S  T  +++  
Sbjct: 29  SVYNTSM-----NIIPIFVPHEGCRTRCIFCNEYSATGVTGVPDEKEIVS--TVEKYLSF 81

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  +   F+GG        Q    +     K   +     I    +P  +     + 
Sbjct: 82  FRHPEDVELAFYGGTFTGFGNQQKYLEVATEFFKAGQIKG---IRFSTSPGLISERLVEY 138

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            +   VN I LGVQS ++  L    R+HN S+   A HL  +   +    L+  LP+ + 
Sbjct: 139 LKPYPVNFIELGVQSFDDTVLEKSNRDHNTSDVYKATHLLNSNGIKFGIHLMTGLPEDSE 198

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLF---YKMHKDGDLVL 226
           ++     + A+      + L+ L I KG+L    YK+ +   L L
Sbjct: 199 SKDIHSTREAIRVGASSVRLHPLVILKGSLLENEYKLRRFSPLDL 243


>gi|39997325|ref|NP_953276.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39984216|gb|AAR35603.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
 gi|307634986|gb|ADI84985.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter sulfurreducens KN400]
          Length = 342

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--E 85
           C  +C +CD     +    G+   + S       ++     R + + F+GG   SL   E
Sbjct: 16  CPHRCVFCD-----QERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAAFYGGTFTSLPRNE 70

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +   L  +  + +V S   + +   P +++       +  GV  + LGVQS+++Q L
Sbjct: 71  QERLLAALQPLRHDGSVRS---VRLSTRPDALDAETAGFLKSMGVASVELGVQSMDDQVL 127

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
              GR H+A++ + A  + R+    +   L+  LP  +  +    L R L      L +Y
Sbjct: 128 DVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPGDSRERSLDSLTRILDLKPVSLRIY 187

Query: 206 QLTIEKGTLFYKMHKDG 222
              +  GT   +   +G
Sbjct: 188 PTLVVAGTRLAEFWAEG 204


>gi|253681549|ref|ZP_04862346.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
 gi|253561261|gb|EES90713.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
          Length = 364

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 8/204 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ NS          NF+++ + E  +++ +    SI  + F G
Sbjct: 10  IPIFVPHEGCPHDCVFCNQNSITGSSSKVDGNFVKNTIEE--YLKTINKENSIIEVSFFG 67

Query: 79  GTPSLIE--PQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GT + I+   QN  L    +AK++     ++ I +   P  ++ N  +  ++   + I L
Sbjct: 68  GTFTAIDINKQNELL---RVAKHYKDLGKIDYIHLSTRPDYIDDNILKNLKEYSADVIEL 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+++ L   GR H   + + A  L +     +   ++  LP     +     ++ +
Sbjct: 125 GVQSLDDEVLLKSGRGHTVDDVVKASKLIKEYGFVLGLQVMLGLPGDNFEKDIYTAKKVI 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
               +   +Y   + K T    M+
Sbjct: 185 DLKPEIARIYPALVVKNTPMETMY 208


>gi|325143012|gb|EGC65367.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis 961-5945]
          Length = 323

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           E +IE +P  V  +      + G NR+S+G+Q  + +    + R  +  E    I  AR 
Sbjct: 7   EYSIEIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAARE 66

Query: 167 I-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             F  +S DLIY LP QT    +  +   LS   D L+LY
Sbjct: 67  AGFKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALY 106


>gi|261403497|ref|YP_003247721.1| hypothetical protein Metvu_1386 [Methanocaldococcus vulcanius M7]
 gi|261370490|gb|ACX73239.1| conserved hypothetical protein [Methanocaldococcus vulcanius M7]
          Length = 340

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 10/125 (8%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + ++I   P  +E   ++    Y K G +  I LGVQ++ +++L+ L R HN S+ I AI
Sbjct: 141 IGLSIGTRPDCLEEEKLDILGEYVKKGYDIWIDLGVQTMHQKTLKILNRGHNVSDTITAI 200

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWE--MELQRAL-SYAVDHLSLYQLTIEKGTLFYKM 218
                   ++   +I  LP +T   W+  ME  + L S  +D + +Y L + KGT   +M
Sbjct: 201 QNCHEKGIKVCGHIILGLPNET---WDDMMETAKILSSLKIDAVKIYPLVVIKGTKLEEM 257

Query: 219 HKDGD 223
           +  G+
Sbjct: 258 YWRGE 262


>gi|45644870|gb|AAS73155.1| coproporphyrinogen III oxidase [Pasteuria penetrans]
          Length = 113

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEV----NNFQGYRKAGV 130
           +GGGTP+L+ P+ +  + + +   + +S  + E T+E NP ++         +  R  GV
Sbjct: 7   WGGGTPTLLTPKQLLRLGEALLAFFPLSGGDSEWTVEGNPETLVTAEGGERLRILRSLGV 66

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           NRISLG Q+  +  L+ LGR H     + A+
Sbjct: 67  NRISLGAQAFTDSLLKKLGRVHGVETILRAV 97


>gi|315930179|gb|EFV09300.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 331

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 2/146 (1%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S + EI+ E +P  +         + G NRIS GVQ  +E+  + + R  +      A++
Sbjct: 12  SKDAEISCEIDPRFLNEEQAIVLTQNGFNRISFGVQDFDEKVQKEIHRIQSFELTQNALN 71

Query: 163 LARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           L RN     ++ DLIY LP Q +  +   L++ +    D L+++        L   M K 
Sbjct: 72  LVRNKGIKSVNMDLIYGLPYQNLQSFTQTLEKVMLLNPDRLAIFNYA-HVPWLKKNMRKF 130

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHG 247
            +  LPS +V +++    +   S +G
Sbjct: 131 DENTLPSPDVKLEILEFCEKFLSKNG 156


>gi|302874773|ref|YP_003843406.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690612|ref|ZP_07633058.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302577630|gb|ADL51642.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 349

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 4/205 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ N+     +V  + F+++ + E  ++  +    S   + F G
Sbjct: 8   IPIFVPHEGCPHNCVFCNQNTITGNSEVIDDKFVRNTIEE--YIETIDINNSTIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GT + I+ +    +L  +AK +     ++ I +   P  +  +  +  R   V+ I LGV
Sbjct: 66  GTFTAIDIEKQRQLL-AVAKEYKEKKLIKYIRLSTRPDYINHDILEHLRSYKVDIIELGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR HN  + + A  L +     +   ++  LP  T  +     ++ +  
Sbjct: 125 QSLDDEVLKKSGRGHNEKDVVFASRLIKEYGFTLGLQVMVGLPGDTEEKDIKTAEKIIEM 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG 222
               + +Y   +   T    M K G
Sbjct: 185 KPTLVRIYPSLVITNTPMETMFKQG 209


>gi|281413068|ref|YP_003347147.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|281374171|gb|ADA67733.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 317

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C K+C +CD      + KV   + I   + E                F+GG
Sbjct: 4   IPVFLPYAGCKKRCVFCDQIKATGQTKVPSLDDIARIIEEYSRTSN-----EYELGFYGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L E Q    +     K + V  ++ ++    P  +     +  +K GVN I +GVQ
Sbjct: 59  TFTGLSEEQMEEYLR--FVKGFPVVKSIRVS--TRPDEINERKLKILKKYGVNVIEVGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP+       +   R +   
Sbjct: 115 SFLDEVLERSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPRSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M K+          AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDLVCILEGWGTKVIRIGYH 232


>gi|325959652|ref|YP_004291118.1| histone acetyltransferase, ELP3 family [Methanobacterium sp. AL-21]
 gi|325331084|gb|ADZ10146.1| histone acetyltransferase, ELP3 family [Methanobacterium sp. AL-21]
          Length = 542

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 11/268 (4%)

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           T  L  P++ A + D   KN   S   V +T E  P   ++ +       GV R+ LGVQ
Sbjct: 185 TGELKVPEDFAYLKDVQIKNELSSVRCVGMTFETRPDYAKIEDIDRMLNMGVTRVELGVQ 244

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL---PKQTMTQWEMELQRAL 195
           ++     + + R H   +A+ +    R+   +++F ++  L   P + M  +    +   
Sbjct: 245 TIYNFIYKRIERGHRVEDAVKSAQYLRDSGIKVAFHMMPGLFSDPDRDMRIFHRIFEDE- 303

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA---HGLHAYE 252
            +  D + +Y   + KG+  Y + K GD    S   AVDL    + I            +
Sbjct: 304 KFRPDMIKIYPCLVTKGSKLYDLWKAGDYEPYSTEDAVDLIVKVKKILPKWVRTMRIQRD 363

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKN 311
           I +          NL    Y    G G      R +   HR A  +     + + +V+  
Sbjct: 364 IPSQLIEAGVKKSNLGELVYNKLEGEGVNCKCIRCREVGHRAANGVIPDFHN-VDLVKTE 422

Query: 312 GHAVVEKE-FLSSEQQADEFLMMGLRLR 338
            +A   +E FLS E  + + LM  LRLR
Sbjct: 423 YNAAGGREIFLSQEDLSKDILMGFLRLR 450


>gi|19703498|ref|NP_603060.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713586|gb|AAL94359.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 40/265 (15%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-MNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+       +  L ++    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPK---SDFKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           Q   ++L    D   +Y   + KGT    M+K                NL QS+T    +
Sbjct: 173 QSAIKSLDLNPDIARIYPTLVIKGTELEFMYKK---------------NLYQSLTVEEAV 217

Query: 249 HAYEISNHSFLGAESLHNLNYWRYG 273
               +  +S L    L N+N  R G
Sbjct: 218 ER-TVPIYSLL---ELKNINVIRVG 238


>gi|237751127|ref|ZP_04581607.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229373572|gb|EEO23963.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 337

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+ E++L+   R H      +     R    ++   LIY LP +++      LQ
Sbjct: 182 LEYGIQSIYEETLKLTNRGHTMEGVESLFKETRKRGIKVCAHLIYGLPNESVDMMIHSLQ 241

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             LSY VD L ++ L + +GT   +M+K G+
Sbjct: 242 TILSYGVDSLKIHPLYVVEGTALARMYKKGE 272


>gi|150399639|ref|YP_001323406.1| ELP3 family histone acetyltransferase [Methanococcus vannielii SB]
 gi|150012342|gb|ABR54794.1| histone acetyltransferase, ELP3 family [Methanococcus vannielii SB]
          Length = 541

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LG+QS   + L F+ R H+   +I A  L +
Sbjct: 208 VALTIETRPDYCGEKEINQMLNLGATRVELGIQSTYGEVLDFVKRGHDIDASINATRLLK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ +I  LP  T    +  ++       Y  D +  Y   +  GT  Y + K G
Sbjct: 268 DSGLKVSYHIIPGLPNTTFEMDKKMIETIFEDNRYKPDLIKFYPCLVIPGTEIYDLWKQG 327

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                ++  A++L    +SI
Sbjct: 328 KFSPMNDEKAIELIVYGKSI 347


>gi|118576344|ref|YP_876087.1| histone acetyltransferase [Cenarchaeum symbiosum A]
 gi|118194865|gb|ABK77783.1| histone acetyltransferase [Cenarchaeum symbiosum A]
          Length = 522

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 105 NVEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           NV +TIE  P     V V+   G+   G  R+ +GVQSL+E+  + + R HN  + + + 
Sbjct: 198 NVGLTIETKPDYCKRVHVDAMLGF---GATRVEIGVQSLQEEVYKRVNRGHNYQDVVESF 254

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYK 217
             A++   +++  ++  LP  T  + ++E  R L    +   D L +Y   + +GT  Y 
Sbjct: 255 AAAKDAGYKVAAHMMPGLPGAT-PEGDIEDMRMLFEDPALRPDMLKIYPALVVRGTPMYD 313

Query: 218 MHKDGDLVLPSENVAV 233
            +  G+    +E  AV
Sbjct: 314 EYARGEYSPYTEEEAV 329


>gi|221505598|gb|EEE31243.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 845

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 56/202 (27%)

Query: 20  GVYVHWPFCVKKCPYCDF--------------NSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            VY+H PFCVK+C +C F              + H       +     SF  +  + R+ 
Sbjct: 114 AVYIHMPFCVKRCHFCAFPVTLLPATPRRPPHSLHCAPESQCRTGVSCSFSMKHNFGRE- 172

Query: 66  TGPRS-----------------------ISSIFFGGGTPSLIEPQ---NIALILDGIAKN 99
             P S                         SI+FGGGTPSLI P+    +  +L+  A +
Sbjct: 173 -APASGHSKTSSRRGHLWGASGEFSETLFRSIYFGGGTPSLIPPRLLRRVLTVLEAEAHS 231

Query: 100 WTVSSNVEI------TIEANP-------SSVEVNNF-QGYRKAGVNRISLGVQSLEEQSL 145
              +S   I       +++ P        +V    + +     GV R S+GVQS ++  L
Sbjct: 232 LERASTRRIPPSAASCLQSYPVCALMFTDTVHSKEYLEELADLGVTRFSVGVQSFDDDIL 291

Query: 146 RFLGRNHNASEAIAAIHLARNI 167
           + LGR+++ +  +  +   R++
Sbjct: 292 KRLGRSNDRAGNVRVLQCLRDL 313


>gi|294784572|ref|ZP_06749861.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294487788|gb|EFG35147.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 348

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 40/265 (15%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-MNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+  +    +  L ++    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYNIVKKSCDLIKSYGFELGVQLMIGLPK---SDYKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           Q   ++L    D   +Y   + KGT    M+K                NL QS++    +
Sbjct: 173 QSAIKSLELNPDIARIYPTLVIKGTELEFMYKK---------------NLYQSLSIEEAV 217

Query: 249 HAYEISNHSFLGAESLHNLNYWRYG 273
               +S +S L    L N+N  R G
Sbjct: 218 DR-TVSIYSLL---KLKNINVIRVG 238


>gi|221484431|gb|EEE22727.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 845

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 56/202 (27%)

Query: 20  GVYVHWPFCVKKCPYCDF--------------NSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            VY+H PFCVK+C +C F              + H       +     SF  +  + R+ 
Sbjct: 114 AVYIHMPFCVKRCHFCAFPVTLLPATPRRPPHSLHCAPESQCRTGVSCSFSMKHNFGRE- 172

Query: 66  TGPRS-----------------------ISSIFFGGGTPSLIEPQ---NIALILDGIAKN 99
             P S                         SI+FGGGTPSLI P+    +  +L+  A +
Sbjct: 173 -APASGHSKTSSRRGHLWGASGEFSETLFRSIYFGGGTPSLIPPRLLRRVLTVLEAEAHS 231

Query: 100 WTVSSNVEI------TIEANP-------SSVEVNNF-QGYRKAGVNRISLGVQSLEEQSL 145
              +S   I       +++ P        +V    + +     GV R S+GVQS ++  L
Sbjct: 232 LERASTRRIPPSAASCLQSYPVCALMFTDTVHSKEYLEELADLGVTRFSVGVQSFDDDIL 291

Query: 146 RFLGRNHNASEAIAAIHLARNI 167
           + LGR+++ +  +  +   R++
Sbjct: 292 KRLGRSNDRAGNVRVLQCLRDL 313


>gi|237838013|ref|XP_002368304.1| radical SAM domain containing protein [Toxoplasma gondii ME49]
 gi|211965968|gb|EEB01164.1| radical SAM domain containing protein [Toxoplasma gondii ME49]
          Length = 845

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 56/202 (27%)

Query: 20  GVYVHWPFCVKKCPYCDF--------------NSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            VY+H PFCVK+C +C F              + H       +     SF  +  + R+ 
Sbjct: 114 AVYIHMPFCVKRCHFCAFPVTLLPATPRRPPHSLHCAPESQCRTGVSCSFSMKHNFGRE- 172

Query: 66  TGPRS-----------------------ISSIFFGGGTPSLIEPQ---NIALILDGIAKN 99
             P S                         SI+FGGGTPSLI P+    +  +L+  A +
Sbjct: 173 -APASGHSKTSSRRGHLWGASGEFSETLFRSIYFGGGTPSLIPPRLLRRVLTVLEAEAHS 231

Query: 100 WTVSSNVEI------TIEANP-------SSVEVNNF-QGYRKAGVNRISLGVQSLEEQSL 145
              +S   I       +++ P        +V    + +     GV R S+GVQS ++  L
Sbjct: 232 LERASTRRIPPSAASCLQSYPVCTLMFTDTVHSKEYLEELADLGVTRFSVGVQSFDDDIL 291

Query: 146 RFLGRNHNASEAIAAIHLARNI 167
           + LGR+++ +  +  +   R++
Sbjct: 292 KRLGRSNDRAGNVRVLQCLRDL 313


>gi|237740803|ref|ZP_04571284.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422820|gb|EEO37867.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 348

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I  +     L+ + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  EVAFFGGTFTGISMELQKQYLE-VVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GR+++      +  L +     +   L+  LPK       M  
Sbjct: 116 TIELGIQSLDDEVLKATGRHYDYEIVKKSCDLIKKYGFTLGVQLMIGLPKSDFKSDLMSA 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            ++L    D   +Y   + KGT    M+K
Sbjct: 176 VKSLDLNPDIARIYPTLVIKGTELEFMYK 204


>gi|118443799|ref|YP_878291.1| bioB/LipA-like protein [Clostridium novyi NT]
 gi|118134255|gb|ABK61299.1| bioB/LipA-like protein [Clostridium novyi NT]
          Length = 359

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 23/268 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ N+           F++   T  Q+++ +    SI  + F G
Sbjct: 9   IPIFVPHEGCPHDCVFCNQNTITGTSNKVNGKFVEE--TIEQYLKTIKRENSIVEVSFFG 66

Query: 79  GTPSLI--EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GT + I  E QN  L    +AK +     ++ I +   P  ++    +  +K   + I L
Sbjct: 67  GTFTAIDIEKQNELL---TVAKRYKDMGKIDYIHLSTRPDYIDDFILENLKKYSADVIEL 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+++ L   GR H   + I A  L +     +   ++  LP  T   +E +++ A 
Sbjct: 124 GVQSLDDEVLIKSGRGHTVEDVIKASKLIKKYNFVLGLQMMLGLPGDT---FEKDIETAK 180

Query: 196 SYAV---DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  +   +Y   + K T   KM+ + ++  P        Y L +++     +++  
Sbjct: 181 KIIKIKPEIARIYPTLVVKNTPMEKMYIN-NIYKP--------YTLDEAVKIGKVVYSML 231

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGP 280
           I+N   +    L       YG  + IGP
Sbjct: 232 IANDINVIRVGLQPTEEINYGKELVIGP 259


>gi|126458716|ref|YP_001054994.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126248437|gb|ABO07528.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 477

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P  V+        + GV R+ LGVQS+ +  L  + R H A EA  A  L +
Sbjct: 136 VALAVETRPDYVDEGEVDFLLQLGVTRVELGVQSIYDDVLAKVKRGHGAREAAEATALLK 195

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + L+  LP     + ++E+ + +    +Y  D + +Y L +  GT  Y+  + 
Sbjct: 196 DAAYKVCYHLMPGLPGSDPDR-DLEMFKTVFSDPAYMPDCVKIYPLYVVPGTELYEQWRR 254

Query: 222 G 222
           G
Sbjct: 255 G 255


>gi|317057717|ref|YP_004106184.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
 gi|315449986|gb|ADU23550.1| Radical SAM domain protein [Ruminococcus albus 7]
          Length = 341

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 95/253 (37%), Gaps = 12/253 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +++ ++V    C  KC +CD  +   + K+  +  ++     +Q + Q+         FF
Sbjct: 3   SNISIFVPHVGCPHKCAFCDQRTITGKQKLPHKEDVERAC--LQALGQVDDISDTEIAFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GG   ++  P+   L L   A  +      + I +   P  +        +K GV  I L
Sbjct: 61  GGSFTAI--PREYMLELLSAAYKFVGEGKFKGIRLSTRPDYINREVLDILKKYGVTSIEL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS+ ++ L    R H A +   A  L R     +   ++  L K    Q +      +
Sbjct: 119 GAQSMSDEVLEANERGHTAEDVRQASRLIREYGFELGLQMMVGLYKSGHRQEDETFNEIM 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDG-------DLVLPSENVAVDLYNLTQSITSAHGL 248
           +   D + +Y + I K T   ++   G       D VL     A+  +          GL
Sbjct: 179 AIHPDTVRIYPVVILKHTRLAELLASGEYKPMSFDEVLSLSTRALGAFTEAGIKVIKCGL 238

Query: 249 HAYEISNHSFLGA 261
           HA E   +  +G 
Sbjct: 239 HASEFVENDMVGG 251


>gi|170758735|ref|YP_001787765.1| radical SAM domain-containing protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405724|gb|ACA54135.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 363

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 9/228 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + ++V    C   C +C  N H     + ++  EN+I+  +    +++ +    S   I 
Sbjct: 8   IPIFVAQEGCPHNCVFC--NQHKITGEKGEIVDENYIRETIE--AYIKTIDRENSTLEIS 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGT + I  +    +L  +AK +     ++ I +   P  ++       +K   + I 
Sbjct: 64  FFGGTFTGIPIERQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           L    D   +Y   + K T    M K G     + + A+D+  L  S+
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSM 230


>gi|11499978|ref|NP_071224.1| hypothetical protein AF2402 [Archaeoglobus fulgidus DSM 4304]
 gi|2650692|gb|AAB91263.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 517

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V IT E  P      + +   + G  ++ LGVQSL +  L  + R H   E   A  L R
Sbjct: 194 VGITFETRPDYAREEHIREMLRFGGTKVELGVQSLYDDVLERIKRGHGVKEVAEATRLLR 253

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LP  +  + ++ + R L    S+  D+L +Y   + +GT  Y+M K 
Sbjct: 254 DSAFKVGYHIMPGLPGSSF-ERDLRMFRELFENDSFKPDYLKIYPTLVVEGTELYEMWKR 312

Query: 222 GD 223
           G+
Sbjct: 313 GE 314


>gi|260496870|ref|ZP_05815990.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
           3_1_33]
 gi|260196612|gb|EEW94139.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
           3_1_33]
          Length = 348

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-MNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+  +    +  L ++    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYNIVKKSCDLIKSYGFELGIQLMIGLPK---SDFKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           Q   ++L    D   +Y   + KGT    M+K
Sbjct: 173 QSAIKSLELNPDIARIYPTLVIKGTELELMYK 204


>gi|237741210|ref|ZP_04571691.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256846346|ref|ZP_05551803.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|229430742|gb|EEO40954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256718115|gb|EEU31671.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
          Length = 348

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 40/265 (15%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I        L+ + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGISMDLQKEYLE-VVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+       +  L ++    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPK---SDYKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           Q   ++L    D   +Y   + KGT    M+K                NL QS++    +
Sbjct: 173 QSAIKSLELNPDIARIYPTLVIKGTELEFMYKK---------------NLYQSLSIEEAV 217

Query: 249 HAYEISNHSFLGAESLHNLNYWRYG 273
               +S +S L    L N+N  R G
Sbjct: 218 DR-TVSIYSLL---KLKNINVIRVG 238


>gi|317131321|ref|YP_004090635.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
 gi|315469300|gb|ADU25904.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
          Length = 334

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 77/198 (38%), Gaps = 8/198 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIE 85
           C   C +CD  S   +        +   L  +   R+  G RS  +   FFGG   ++  
Sbjct: 16  CAHACSFCDQRSIAGQAAPPSPADVAGTLARV---REQMGSRSRDAEVAFFGGSFTAIPR 72

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            Q +AL L+ +A          I +   P +V+ +     R  GV  I LG QS+++  L
Sbjct: 73  RQMLAL-LEAVAPFLGADGFSGIRVSTRPDAVDDDVLALLRAHGVTSIELGAQSMDDAVL 131

Query: 146 RFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              GR H A +   AA+ + R  F  +   ++  LP           +   +   D + +
Sbjct: 132 CRNGRGHTARQVRDAALRVGRAGF-SLGLQMMTGLPGDGPAGARRTARELAALHPDTVRI 190

Query: 205 YQLTIEKGTLFYKMHKDG 222
           Y   + +GT       DG
Sbjct: 191 YPALVLRGTRMAAWWADG 208


>gi|34764314|ref|ZP_00145148.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27885914|gb|EAA23256.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 320

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 40/265 (15%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I        L+ + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGISMDLQKEYLE-VVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+       +  L ++    +   L+  LPK   + ++ +L
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPK---SDYKSDL 172

Query: 192 Q---RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           Q   ++L    D   +Y   + KGT    M+K                NL QS++    +
Sbjct: 173 QSAIKSLELNPDIARIYPTLVIKGTELEFMYKK---------------NLYQSLSIEEAV 217

Query: 249 HAYEISNHSFLGAESLHNLNYWRYG 273
               +S +S L    L N+N  R G
Sbjct: 218 DR-TVSIYSLL---KLKNINVIRVG 238


>gi|169336971|ref|ZP_02863148.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
 gi|169296481|gb|EDS78614.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
          Length = 320

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 4/116 (3%)

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR--N 166
           +IE +P+++        +K  VNRIS+G+QS +E  L+ + R         ++ L +  N
Sbjct: 22  SIETSPNTMNKEYMGLLKKFHVNRISMGIQSFKECELKEIYRFETIDNINKSLGLMKKEN 81

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI-EKGTLFYKMHKD 221
           I  R + DLIY +P Q++  +   L++ + Y  + + LY L I E+  L+ K  +D
Sbjct: 82  IEIR-NLDLIYGIPSQSIESFIDSLKKVIQYNSEEVFLYPLYIRERTKLYEKYERD 136


>gi|161528087|ref|YP_001581913.1| ELP3 family histone acetyltransferase [Nitrosopumilus maritimus
           SCM1]
 gi|160339388|gb|ABX12475.1| histone acetyltransferase, ELP3 family [Nitrosopumilus maritimus
           SCM1]
          Length = 527

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV  TIE  P   +  +       GV RI +GVQSL+E+    + R HN ++ + +  ++
Sbjct: 199 NVGFTIETKPDFCKKEHVDWMLDYGVTRIEIGVQSLQERVYNIINRGHNYNDVVESFQIS 258

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA---VDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP  T      + ++  S +    D L +Y   + + T  Y+ +KD
Sbjct: 259 KDAGYKLVAHMMPGLPTMTPEGDIADFKKLFSDSQLRPDMLKIYPSLVIENTPMYQEYKD 318

Query: 222 G 222
           G
Sbjct: 319 G 319


>gi|291278589|ref|YP_003495424.1| hypothetical protein DEFDS_0156 [Deferribacter desulfuricans SSM1]
 gi|290753291|dbj|BAI79668.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 336

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 19/156 (12%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNS----HVRRYKVGQENFIQSFL-TEMQWMRQLTGPR 69
           G + L V++ +  C KKC YC  NS     +  +K   E+ +  FL  + +W        
Sbjct: 4   GKDILPVFIPFAGCPKKCIYCQQNSITGVKLHDFKKDVEDQVNLFLRVKKKW-------- 55

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
               I F GG+ +L+ P++    L  +A +  +   +++ +   PS  +       +   
Sbjct: 56  --GKIAFYGGSFNLL-PKDKREFLYKVANSINI---LKVRVSCYPSGFDTELINEMKDNN 109

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V  + LGVQS  E+ LR  GR+++++E +  + L +
Sbjct: 110 VEDVELGVQSFSEKVLRLNGRDYSSNEVVKILKLLK 145


>gi|332981631|ref|YP_004463072.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332699309|gb|AEE96250.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
          Length = 360

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 12/208 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPR--SISSIF 75
           + V++    C  +C YC+      +Y + G    I S   ++     LT P    I   F
Sbjct: 9   IPVFIPQQGCPFQCIYCN------QYAITGMRQDILSQADKILRQAILTAPSGTDIEVAF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +GG   ++  PQ++   L  +A ++    N+ +I +   P  +           GV  I 
Sbjct: 63  YGGTFTAM--PQDVQESLLKLAASYRQYINITDIRLSTRPDYINPPILDMLSHNGVTVIE 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG QS+++  L   GR H++ +   A +L +    ++   L+  LP     +    + +A
Sbjct: 121 LGAQSMDDAVLHASGRGHSSKDVEDAAYLIKEYDIKLGIQLMVGLPSDDAGKDMRSVIKA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +    D + +Y   + K T   +++  G
Sbjct: 181 IDIGADFIRIYPTLVIKDTPLERLYLKG 208


>gi|225019244|ref|ZP_03708436.1| hypothetical protein CLOSTMETH_03197 [Clostridium methylpentosum
           DSM 5476]
 gi|224947875|gb|EEG29084.1| hypothetical protein CLOSTMETH_03197 [Clostridium methylpentosum
           DSM 5476]
          Length = 339

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 4/219 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V+V    C  +C +C+  +           F++   T  Q +RQL    S + + F 
Sbjct: 5   NVAVFVPHAGCPHQCSFCNQRAISGTQLQPDAAFVRR--TCSQAVRQLGERCSDAELAFF 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GG+ + IE ++  L L G A+ +     +  I +   P ++     +  ++  V  I LG
Sbjct: 63  GGSFTAIE-RSYMLELLGAAQEFVGEGGLSGIRVSTRPDAISPEILELLKEHCVTAIELG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+ + L    R H A +A  A  L R     +   ++  L   +        ++ ++
Sbjct: 122 VQSLDNRVLALNKRGHTAQDAEQAARLIRLYGFSLGLQMMVGLYGDSKESLYHTARQIVA 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            + D + +Y   + +GT    +++ G       N AVDL
Sbjct: 182 LSPDTVRIYPTVVLRGTALEALYQSGAYQPLELNDAVDL 220


>gi|258406358|ref|YP_003199100.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798585|gb|ACV69522.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 354

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 8/222 (3%)

Query: 5   SAYENNMTGQGSNSL-GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WM 62
           + +    TG+    +  V++ +  C  +C YC  +    +  +  E        ++  + 
Sbjct: 15  ATFAPAPTGKAKRHIHPVFLPFQGCPGRCIYCAQDRQTGQSPLALEEMHARLHDQLSNYA 74

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNN 121
           RQ T   S+   FFGG T + +  Q +   L+ +A+ +     +E +     P  +E   
Sbjct: 75  RQGT---SLELGFFGG-TFTGLPLQWLQRFLE-LAREFKNRGVLERVRCSTRPDFLESRK 129

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
                +   + + +G+QS +   LR   R +    A+AA +  +     +   L+  LP 
Sbjct: 130 LDLLAEHDFDLVEIGIQSFDGTVLRQSQRGYTPETAVAACNRVKTFGMGLGIQLLPGLPG 189

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            T   W  +++  LS A + L +Y   +  GT   ++ ++GD
Sbjct: 190 HTPAIWARDIEATLSVAPECLRIYPCVVIDGTPLSRLWREGD 231


>gi|301058172|ref|ZP_07199224.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
 gi|300447804|gb|EFK11517.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
          Length = 339

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 8/208 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +++    C  +C +CD      R   +   + ++  L      ++  G      + F 
Sbjct: 6   IPIFISHAGCPHRCLFCDQEKITDRSTHITDPSEVRKTLDAAARAKRF-GSYKNRELAFY 64

Query: 78  GGTPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGT + +   ++  +LD  A   +N T++S   I I   P S++       +   V  + 
Sbjct: 65  GGTFTGLSKSHMESLLDAAAPYIRNGTLNS---IRISTRPDSLDAERLAILKAYHVTTVE 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS+ +  L    R H A ++  A+ + +N    +   L+  LP  +   +     R 
Sbjct: 122 LGVQSMNDWVLALSRRGHTAKDSQEAVRMLKNHGFSVGIQLMPGLPGDSKESFLKTADRV 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           L+     + LY   + KGT   +++ +G
Sbjct: 182 LALKPQMVRLYPALVIKGTGMARLYDEG 209


>gi|119477014|ref|ZP_01617295.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
 gi|119449821|gb|EAW31058.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
          Length = 457

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/197 (19%), Positives = 85/197 (43%), Gaps = 6/197 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           Q    L + V+ PFC   C  C  N  +         ++     E++   +L    R++ 
Sbjct: 61  QNIAPLSILVNVPFCRHHCQTCVNNKIMAWDHSAIRKYLDYLSKEIRMQAKLVNKHRTVL 120

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            +    GT + ++   +  ++  +A ++  T S   E ++E +  +V ++N    +  G 
Sbjct: 121 KLQIDRGTAAFLKGAELTELMHNLACHYKLTDSERREYSVELDFRTVTLDNLALLKGLGF 180

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWE 188
           N++S+G+Q  ++  ++   + H     I     A  +  F  +S+DL++  P QT+    
Sbjct: 181 NQLSVGIQGFDDH-VKIENKLHKRFNIIKTWMTAARVYGFKSISYDLVFGHPSQTLMSLG 239

Query: 189 MELQRALSYAVDHLSLY 205
             L + +  + D +  +
Sbjct: 240 TTLDKMIELSPDRMYFF 256


>gi|296328080|ref|ZP_06870614.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154856|gb|EFG95639.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 15/209 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I   N+      + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  QVAFFGGTFTGIS-INLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GRN+       +  L ++    +   L+  LPK          
Sbjct: 116 TIELGIQSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPKSDFKSDLQSA 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            ++L    D   +Y   + KGT    M+K
Sbjct: 176 MKSLDLNPDIARIYPTLVIKGTELEFMYK 204


>gi|5912566|emb|CAB56203.1| oxygen independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus subsp. pastoris str. PCC 9511]
          Length = 165

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           A G   YEISN+S  G +S HN  YW+   +   G G+ S    G +     I K  + W
Sbjct: 1   ASGYSRYEISNYSIPGHQSRHNRVYWKGLGWWSFGQGSTS-SPWGENFTRPRISKDYKKW 59

Query: 305 LKMVRKNGHAVVEKEFLSSE---QQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              V K     +E   ++ E   ++ DE +M+G+RL+EGI++ +  +L  +N D
Sbjct: 60  ---VTKQCEIKLEHSLINQENIYKELDEKIMLGMRLKEGINIYN--LLNEQNWD 108


>gi|254169227|ref|ZP_04876061.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|289596760|ref|YP_003483456.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|197621823|gb|EDY34404.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|289534547|gb|ADD08894.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
          Length = 514

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 7/137 (5%)

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           A +++  AKN  +     +T+E  P            K G  R+ LG+Q++ +  L  + 
Sbjct: 179 AQLINEDAKNRCIG----LTVETRPDWFMEKEIDFALKLGATRVELGIQTVYDDILEKVK 234

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQ 206
           R H   E+I A  LA++   ++++ ++  LP  ++ +     +      ++  D L +Y 
Sbjct: 235 RGHTIRESILATRLAKDAGFKINYHMMPGLPGSSLERDYKAFKEIFENPNFRPDMLKIYP 294

Query: 207 LTIEKGTLFYKMHKDGD 223
             + KGT  Y+M K G+
Sbjct: 295 TLVVKGTELYEMWKKGE 311


>gi|261218975|ref|ZP_05933256.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M13/05/1]
 gi|261321526|ref|ZP_05960723.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M644/93/1]
 gi|260924064|gb|EEX90632.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M13/05/1]
 gi|261294216|gb|EEX97712.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M644/93/1]
          Length = 295

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+   
Sbjct: 9   GVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETL 68

Query: 188 EMELQRALSYAVDHLSLY 205
               +R ++ + D ++ Y
Sbjct: 69  RETCERVVTLSPDRVACY 86


>gi|261221857|ref|ZP_05936138.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           B1/94]
 gi|261757870|ref|ZP_06001579.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|265997821|ref|ZP_06110378.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M490/95/1]
 gi|260920441|gb|EEX87094.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           B1/94]
 gi|261737854|gb|EEY25850.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|262552289|gb|EEZ08279.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M490/95/1]
          Length = 295

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+   
Sbjct: 9   GVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETL 68

Query: 188 EMELQRALSYAVDHLSLY 205
               +R ++ + D ++ Y
Sbjct: 69  RETCERVVTLSPDRVACY 86


>gi|120603583|ref|YP_967983.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120563812|gb|ABM29556.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
          Length = 340

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 4/205 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L V++ +  C ++C +C  ++   +      + ++     ++   +   P ++   F+GG
Sbjct: 16  LPVFLPFAGCPQRCVFCAQDAQTGQSVEPVADVLRRVDAILEERARHNRP-AVEIAFYGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
              +L E    A +   +A  W     V  +     P ++     +     G+N I LGV
Sbjct: 75  TFSALPEDDQHACL--ALAARWRERGMVVAVRCSTRPDALPPGKAEALAGLGMNLIELGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ ++ +L   GR  +  +A+ A    R+    +   L+  +P  T   +  +++   S 
Sbjct: 133 QTFDDTALAHAGRGCHGDDALTAARRVRDAGLGLGLQLLPGMPGVTPDIFRADMKVVASL 192

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG 222
             D L LY   + +GT   ++ ++G
Sbjct: 193 RPDCLRLYPCLVLEGTGLARLWREG 217


>gi|46578810|ref|YP_009618.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448222|gb|AAS94877.1| radical SAM domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232673|gb|ADP85527.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 340

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 4/205 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L V++ +  C ++C +C  ++   +      + ++     ++   +   P ++   F+GG
Sbjct: 16  LPVFLPFAGCPQRCVFCAQDAQTGQSVEPVADVLRRVDAILEERARHNRP-AVEIAFYGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
              +L E    A +   +A  W     V  +     P ++     +     G+N I LGV
Sbjct: 75  TFSALPEDDQHACL--ALAARWRERGMVVAVRCSTRPDALPPGKAEALAGLGMNLIELGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ ++ +L   GR  +  +A+ A    R+    +   L+  +P  T   +  +++   S 
Sbjct: 133 QTFDDTALAHAGRGCHGDDALTAARRVRDAGLGLGLQLLPGMPGVTPDIFRADMKVVASL 192

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG 222
             D L LY   + +GT   ++ ++G
Sbjct: 193 RPDCLRLYPCLVLEGTGLARLWREG 217


>gi|260168409|ref|ZP_05755220.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
          Length = 288

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+   
Sbjct: 2   GVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETL 61

Query: 188 EMELQRALSYAVDHLSLY 205
               +R ++ + D ++ Y
Sbjct: 62  RETCERVVTLSPDRVACY 79


>gi|45201297|ref|NP_986867.1| AGR201Cp [Ashbya gossypii ATCC 10895]
 gi|44986151|gb|AAS54691.1| AGR201Cp [Ashbya gossypii ATCC 10895]
          Length = 600

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 16/251 (6%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 262 SLTKCVGITIETRPDYCTRTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVKSVCET 321

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             +A++   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y+
Sbjct: 322 FAVAKDAGYKIVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYE 381

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYW 270
           + K G     + N  VDL     ++        Y +     +     G E  +L  L   
Sbjct: 382 LWKTGRYKSYNANALVDLVARIMALVPPW-TRIYRVQRDIPMPLVTSGVENGNLRELALA 440

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADE 329
           R  D+        +R +VG   V   +  HPE  ++++R++ +A    E FLS E    +
Sbjct: 441 RMKDFGTTCRDVRTR-EVGIQEVHHKV--HPEQ-VELIRRDYYANGGWETFLSYEDPKQD 496

Query: 330 FLMMGLRLREG 340
            L+  LRLR+ 
Sbjct: 497 ILIGLLRLRKA 507


>gi|261315129|ref|ZP_05954326.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M163/99/10]
 gi|261317315|ref|ZP_05956512.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis B2/94]
 gi|265988354|ref|ZP_06100911.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M292/94/1]
 gi|261296538|gb|EEY00035.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis B2/94]
 gi|261304155|gb|EEY07652.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M163/99/10]
 gi|264660551|gb|EEZ30812.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M292/94/1]
          Length = 295

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           GVNR SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+   
Sbjct: 9   GVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETL 68

Query: 188 EMELQRALSYAVDHLSLY 205
               +R ++ + D ++ Y
Sbjct: 69  RETCERVVTLSPDRVACY 86


>gi|84489186|ref|YP_447418.1| histone acetyltransferase [Methanosphaera stadtmanae DSM 3091]
 gi|84372505|gb|ABC56775.1| predicted histone acetyltransferase [Methanosphaera stadtmanae DSM
           3091]
          Length = 541

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 5/158 (3%)

Query: 82  SLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +I P++   I D    N  +    + +T E  P   ++ +     + GV R+ LGVQ+L
Sbjct: 186 KIIPPEDFQYIHDAQKNNEHSKVRCIGLTFETRPDYAKMEDINRMLQFGVTRVELGVQTL 245

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---Y 197
                + + R H   + I A  L R+   +++  ++  L     +   M  +R  +   +
Sbjct: 246 YNHIYKRVDRGHKIQDVIEANQLLRDSGIKVAMHMMPGLLSSFSSDVNM-FKRLFNEPLF 304

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + D L +Y   + +G+ FY M K G+    +   AVDL
Sbjct: 305 SPDMLKIYPCLVTEGSEFYDMWKKGEYEPYTSQQAVDL 342


>gi|302337114|ref|YP_003802320.1| hypothetical protein Spirs_0581 [Spirochaeta smaragdinae DSM 11293]
 gi|301634299|gb|ADK79726.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
          Length = 354

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +Q+LR +GR H+ +    A   A+    + S  LI+ LP +     E  ++
Sbjct: 186 LELGLQSYHDQTLRHIGRGHDTTAFERAYKTAKAGGLKCSVHLIFGLPGEDDAMMEESVR 245

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R      D + ++ L I +GT F +  ++G L +P 
Sbjct: 246 RLARLRPDGVKIHNLHIAEGTRFAQWWREGRLEVPD 281


>gi|15668663|ref|NP_247462.1| hypothetical protein MJ_0486 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496003|sp|Q57910|Y486_METJA RecName: Full=Uncharacterized protein MJ0486
 gi|1591189|gb|AAB98477.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 322

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 19/208 (9%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           I+F  GT +    + +  I D    + +    + ++I   P  +E   ++    Y + G 
Sbjct: 100 IYFYPGTNTYAPAEKLKEIWDF---SLSYKEVIGLSIGTRPDCLEKEKLDILAEYVENGY 156

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  I LGVQS+ +++L  L R H+ S+ I AI        ++   +I  LP ++  +  M
Sbjct: 157 DIWIDLGVQSMHQKTLEILNRGHDVSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEM-M 215

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL----------YNL 238
           E  + LS   ++ + +Y L + KGT   +M+  G+     EN  + L          Y L
Sbjct: 216 ETAKILSLLEIEAVKIYPLVVVKGTKLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVL 275

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHN 266
            Q ++      + ++S   +LG   + N
Sbjct: 276 IQRLSKDKVPESIKVSPEWYLGRLKIMN 303


>gi|261350297|ref|ZP_05975714.1| oxygen-independent coproporphyrinogen III oxidase
           [Methanobrevibacter smithii DSM 2374]
 gi|288861081|gb|EFC93379.1| oxygen-independent coproporphyrinogen III oxidase
           [Methanobrevibacter smithii DSM 2374]
          Length = 554

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 85  EPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           EP N  LI D    N       V +T E  P   +  +       GV R+ LGVQ+L ++
Sbjct: 203 EPSNYVLIDDVQKANENSKVRCVGMTFETRPDYCKKEHINRMLDFGVTRVELGVQTLSDE 262

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL---PKQTMTQWEMELQRALSYAVD 200
               + R H  ++ I +  L R+   +++  ++  L   P + +  ++ +L    ++  D
Sbjct: 263 LYTKIKRGHTIADVIESNTLLRDSAVKVAMHMMPGLFVSPDEDLNMFK-KLFSDDNFKPD 321

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L +Y   + KG+  Y + K+G     ++  AVDL
Sbjct: 322 MLKIYPCLVTKGSELYDLWKEGKYNPYTDEEAVDL 356


>gi|148642902|ref|YP_001273415.1| radical SAM superfamily histone acetyltransferase
           [Methanobrevibacter smithii ATCC 35061]
 gi|148551919|gb|ABQ87047.1| histone acetyltransferase, radical SAM superfamily
           [Methanobrevibacter smithii ATCC 35061]
          Length = 554

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 85  EPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           EP N  LI D    N       V +T E  P   +  +       GV R+ LGVQ+L ++
Sbjct: 203 EPSNYVLIDDVQKANENSKVRCVGMTFETRPDYCKKEHINRMLDFGVTRVELGVQTLSDE 262

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL---PKQTMTQWEMELQRALSYAVD 200
               + R H  ++ I +  L R+   +++  ++  L   P + +  ++ +L    ++  D
Sbjct: 263 LYTKIKRGHTIADVIESNTLLRDSAVKVAMHMMPGLFVSPDEDLNMFK-KLFSDDNFKPD 321

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L +Y   + KG+  Y + K+G     ++  AVDL
Sbjct: 322 MLKIYPCLVTKGSELYDLWKEGKYNPYTDEEAVDL 356


>gi|253581847|ref|ZP_04859071.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium varium
           ATCC 27725]
 gi|251836196|gb|EES64733.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium varium
           ATCC 27725]
          Length = 346

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 5/233 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           ++ +++    C   C +C+    + R   V  E+  ++  T ++ + +     S   + F
Sbjct: 5   NIPIFISHFGCPNACVFCNQKKINGRETDVTMEDLKETIETYLETLPK----NSKKEVAF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GGT + I        L+ + K         I +   P  +     +  +K GV  + LG
Sbjct: 61  FGGTFTGISFDLQRQYLETVHKYIKEGLIDGIRLSTRPDCINREIVEQLKKYGVTSVELG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+E+ L+   R +       A  L +     +   L+  LP+ T     +  ++AL 
Sbjct: 121 VQSLDEKVLKATARYYPIEAVAKACSLLKEYNIELGIQLMIGLPESTFESDFLSAKKALE 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              D   +Y   + KGT   +M K G+      N AV       S+  + G++
Sbjct: 181 MKPDVARIYPTLVIKGTKMEEMFKVGEYKALDINEAVKRTRKIYSLLESSGVN 233


>gi|222445135|ref|ZP_03607650.1| hypothetical protein METSMIALI_00754 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434700|gb|EEE41865.1| hypothetical protein METSMIALI_00754 [Methanobrevibacter smithii
           DSM 2375]
          Length = 554

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 5/155 (3%)

Query: 85  EPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           EP N  LI D    N       V +T E  P   +  +       GV R+ LGVQ+L ++
Sbjct: 203 EPSNYVLIDDVQKANENSKVRCVGMTFETRPDYCKKEHINRMLDFGVTRVELGVQTLSDE 262

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL---PKQTMTQWEMELQRALSYAVD 200
               + R H  ++ I +  L R+   +++  ++  L   P + +  ++ +L    ++  D
Sbjct: 263 LYTKIKRGHTIADVIESNTLLRDSAVKVAMHMMPGLFVSPDEDLNMFK-KLFSDDNFKPD 321

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L +Y   + KG+  Y + K+G     ++  AVDL
Sbjct: 322 MLKIYPCLVTKGSELYDLWKEGKYNPYTDEEAVDL 356


>gi|45360|emb|CAA40903.1| hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|151020|gb|AAA25710.1| ORF A; putative [Pseudomonas aeruginosa PAO1]
          Length = 160

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +  + L +YVH PFC   C YC  N  + + +     ++   + E++ + R L+  + + 
Sbjct: 49  KAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIEIVSRHLSRAQVVE 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVE 118
            + FGGGTP+ + P  +  ++  +    N     + +  IE +P   +
Sbjct: 109 QLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREAD 156


>gi|332030167|gb|EGI69961.1| Elongator complex protein 3 [Acromyrmex echinatior]
          Length = 547

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 STTKCIGITIETRPDYCLKKHLSDMLRYGCTRLEIGVQSIYEDVARDTNRGHTVHAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q++ E  +  ++  D L +Y   + +GT  Y
Sbjct: 271 FHLAKDAGFKVIAHMMPDLPNVDLERDIAQFK-EFFKDPAFRADGLKIYPTLVIRGTGLY 329

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G     + +V VDL
Sbjct: 330 ELWKTGRYKSYAPSVLVDL 348


>gi|154249472|ref|YP_001410297.1| radical SAM domain-containing protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153408|gb|ABS60640.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 317

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 19/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  N ++     G++         ++++  +    +I  I F GGT +     
Sbjct: 21  CRTRCVFC--NQYIM---TGEKT------PNLKFVENINIDETIDEIAFYGGTFT----- 64

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              L  + I K  ++  ++   I   P  V        ++  V  I LG++SL+++ L  
Sbjct: 65  --GLPKETIIKLLSIKPDIPKRISTRPDCVNDEIIGLLKQMNVKVIELGIESLDDEVLNV 122

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R +N+ +AI A+ L  N F  ++  L+  LP+    +    ++  L+  V    ++  
Sbjct: 123 SKRGYNSEDAINAVKLINNQFLLIAH-LMVGLPQDNKEKDLDTIKNLLNIGVKIFRIHPT 181

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + K T   +M   G+    S   AVD+ +    +  A+G     I  H
Sbjct: 182 IVFKNTELERMFLSGEYEPISLEDAVDIVSEMVMLVEANGGQVVRIGYH 230


>gi|323705470|ref|ZP_08117045.1| Radical SAM domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535372|gb|EGB25148.1| Radical SAM domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 354

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +          E +++  + +  +++ +     I   F+GG
Sbjct: 7   IPIFVPHLGCPHKCVFCNQDEITGLKSKVNEEYVERTIED--YLKTIPKNAHIEVSFYGG 64

Query: 79  ---GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
              G P  +E Q   L    I + + +  +++ I +   P  ++       ++ GV+ I 
Sbjct: 65  SFTGIP--LETQKKFL---SIVQKYLILGSIDAIRLSTRPDYIDEVILDNLKRYGVSIIE 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS++ + L    R H+A +   A  L +     +   ++  LP     +      + 
Sbjct: 120 LGVQSMDNEVLLKSHRGHSAVDVFRASELIKEYGFTLGLQIMIGLPGDNRQKLLETADKI 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +S     + +Y   + KGT   KM+K+G
Sbjct: 180 ISLRPAFVRIYPTLVLKGTYLEKMYKNG 207


>gi|121730187|ref|ZP_01682578.1| coproporphyrinogen III oxidase [Vibrio cholerae V52]
 gi|121628062|gb|EAX60606.1| coproporphyrinogen III oxidase [Vibrio cholerae V52]
          Length = 173

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 52/94 (55%), Gaps = 3/94 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 63  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 121

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           GTP+ + P+ I  +   I +++ ++ + EIT+E 
Sbjct: 122 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEG 155


>gi|327312020|ref|YP_004338917.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326948499|gb|AEA13605.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
          Length = 468

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 6/131 (4%)

Query: 97  AKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
           A+N T +   V +T+E  P  +E        + GV R+ +GVQS+ +  L  + R H   
Sbjct: 131 ARNETAALRLVALTVETRPDYLERGQIDDLLEMGVTRVEIGVQSIYDDVLSLVRRGHGVK 190

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEK 211
           E + A    ++   ++ + L+  LP     + ++E+ R +    ++  D + +Y   +  
Sbjct: 191 EVVEATARLKDAAYKVCYHLMPGLPGSDPDR-DLEMFRTVFEDPAFKPDCVKIYPTLVVP 249

Query: 212 GTLFYKMHKDG 222
           GT  Y   + G
Sbjct: 250 GTELYDWWRSG 260


>gi|148270762|ref|YP_001245222.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147736306|gb|ABQ47646.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
          Length = 317

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 90/238 (37%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C ++C +CD      + KV   + I   + E                F+GG
Sbjct: 4   IPVFLPYAGCKRRCVFCDQIKATGQTKVPSLDDIARIIEEYSRTSN-----EYELGFYGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L E Q    +     K + V  ++ ++    P  +     +  +K GVN I +GVQ
Sbjct: 59  TFTGLSEEQMEEYLR--FVKGFPVVKSIRVS--TRPDEINERKLKILKKYGVNVIEVGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP        +   R +   
Sbjct: 115 SFLDEVLEKSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M K+          AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDLVCILEGWGTKVIRIGYH 232


>gi|161506108|ref|YP_001573220.1| hypothetical protein SARI_04295 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867455|gb|ABX24078.1| hypothetical protein SARI_04295 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 309

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               LAR    ++   LI  LP +  ++    L R +   VD + L+ L I KG++  K 
Sbjct: 168 RTTRLARERGLKVCAHLIVGLPGEGQSECLQTLARVVETGVDGIKLHPLHIVKGSIMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      +A+D Y LT
Sbjct: 228 WEAGRL----SGIALDDYTLT 244


>gi|217974291|ref|YP_002359042.1| hypothetical protein Sbal223_3134 [Shewanella baltica OS223]
 gi|217499426|gb|ACK47619.1| conserved hypothetical protein [Shewanella baltica OS223]
          Length = 309

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+  +   V + +   P  V  N       Y+  GV+
Sbjct: 89  YFQAYTSTYDEYQVLMAKYDEAVKDGEI---VGLCVGTRPDCVPDNVLDLLASYQANGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+ ++++LR + R H+ +     +  AR    ++   LI  LP +T + +   
Sbjct: 146 VWLELGLQTAQDETLRKINRGHDFACYCDTVSRARARGLKVCTHLILGLPDETHSDYMAT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           L   L   VD L L+ L + KG+   K  + G L L S
Sbjct: 206 LAAVLQQGVDGLKLHPLHVVKGSTMAKAWRSGRLPLLS 243


>gi|207108808|ref|ZP_03242970.1| coproporphyrinogen III oxidase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 163

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +    SH+   +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACLFLRLFSHLHELRREKTRYISYLKKELALLKN 98

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANP 114
            +   R +    +GGGTP+   P  +  I   I + +   S ++E++ E +P
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDP 150


>gi|298675913|ref|YP_003727663.1| ELP3 family histone acetyltransferase [Methanohalobium evestigatum
           Z-7303]
 gi|298288901|gb|ADI74867.1| histone acetyltransferase, ELP3 family [Methanohalobium evestigatum
           Z-7303]
          Length = 547

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 3/134 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+ IT E  P      +     + G  ++ +GVQS+ +  L  + R H  ++   A  + 
Sbjct: 217 NIGITFETRPDWTNTQHIDRILELGATKVEIGVQSVYDFVLSRINRGHTVNDTAEANRML 276

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP     +     +R      +  D+L +Y   + +GT  YKM + 
Sbjct: 277 RDSGLKVGFHMMPNLPGMGYERELRGFERLFDDSRFMPDYLKIYPTLVTEGTELYKMWER 336

Query: 222 GDLVLPSENVAVDL 235
           G+     ++ AV+L
Sbjct: 337 GEYTALDDDEAVEL 350


>gi|220903466|ref|YP_002478778.1| Radical SAM domain-containing protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867765|gb|ACL48100.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 401

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 8/155 (5%)

Query: 72  SSIFFGGGTPSLIEPQNIALILD--GIA--KNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           + + F GGT + +   + A  LD  G+A  + W  S          P  V     +  R 
Sbjct: 116 AELAFYGGTFTAMPDGDQAACLDLAGLALERGWIRS----FRCSTRPDCVTAPVLERLRA 171

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG   + LGVQS  + +L    R ++ + A+ A    ++    +   L+  +P      +
Sbjct: 172 AGCRCVELGVQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMPGHAPADF 231

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             ++ +AL    D L  Y   + +GT   +M + G
Sbjct: 232 LADVPQALRAGADMLRFYPCLVLEGTALARMWRQG 266


>gi|320352170|ref|YP_004193509.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320120672|gb|ADW16218.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 313

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI---HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           + LGVQS+ ++SLR L RNH  ++ +AA+   H  + I   +   LI  +P ++  +   
Sbjct: 141 VELGVQSIHDRSLRLLNRNHCFADFLAAVDRLHAVQRI--EIGAHLILGIPGESEAEMLA 198

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITSAHGL 248
            ++   +  + HL L+ L + + T  ++++  G + + ++   ++ L  L   I +A  L
Sbjct: 199 TVRTVCALPLQHLKLHHLQVIRDTPLHRLYTQGQVPVWNQEAYLELLLRLVPHIPAALTL 258

Query: 249 HAYEISNHSFL 259
           H    + H  L
Sbjct: 259 HRLWSTAHPHL 269


>gi|168180665|ref|ZP_02615329.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|226949807|ref|YP_002804898.1| radical SAM domain-containing protein [Clostridium botulinum A2
           str. Kyoto]
 gi|182668541|gb|EDT80520.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|226842528|gb|ACO85194.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|322806719|emb|CBZ04288.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum H04402 065]
          Length = 363

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + ++V    C   C +C  N H     + ++  EN+++  +    +++ +    S   + 
Sbjct: 8   IPIFVAQEGCPHNCVFC--NQHKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEVS 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGT + I  +    +L  +AK +     ++ I +   P  ++       ++   + I 
Sbjct: 64  FFGGTFTGIPIERQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|168184660|ref|ZP_02619324.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|182672268|gb|EDT84229.1| radical SAM domain protein [Clostridium botulinum Bf]
          Length = 363

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 9/228 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + ++V    C   C +C  N H     + ++  EN+++  +    +++ +    S   + 
Sbjct: 8   IPIFVAQEGCPHNCVFC--NQHKITGEKNEMIDENYVRETIE--AYIKTIDRENSTLEVS 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGT + I  +    +L  +AK +     ++ I +   P  ++       +K   + I 
Sbjct: 64  FFGGTFTGIPIERQKSLL-KVAKEYKNKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           L    D   +Y   + K T    M K G     + + A+D+  L  S+
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSM 230


>gi|237795889|ref|YP_002863441.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
 gi|229263292|gb|ACQ54325.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 363

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 9/239 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + ++V    C   C +C  N H     + ++  EN+++   T   +++ +    S   + 
Sbjct: 8   IPIFVAQEGCPHNCVFC--NQHKITGEKDEMIDENYVRE--TIEAYIKTIDRENSTLEVS 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGT + I  +    +L  +AK +     ++ I +   P  ++       +K   + I 
Sbjct: 64  FFGGTFTGIPIERQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+ + L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDNEVLLKSGRGHSVHEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M + G+    + + A+D+  +  S+    G+    I
Sbjct: 183 LEMRPDIARIYPALVIKDTPMEYMLRKGNYKPYTLDEAIDITKILYSMYDKEGVKVIRI 241


>gi|150016055|ref|YP_001308309.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902520|gb|ABR33353.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 343

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 7/238 (2%)

Query: 19  LGVYVHWPFCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + ++V    C   C +C  D  + V   +V   + I +    ++ ++       IS  FF
Sbjct: 8   IPIFVPHEGCPHNCVFCNQDRITGVDDEEVTASSVITTINDYLETIKNKNATIEIS--FF 65

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GG    + E +   L+   +AK +     ++ I +   P  +        ++ GV+ I L
Sbjct: 66  GGTFTGIREEKQRELL--KVAKEFKEKGLIDKIRLSTRPDYINDYILTYLKEYGVDIIEL 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL E+ L+  GR H+  + I A  L +     +   ++  LP  T  +     + ++
Sbjct: 124 GVQSLNEEVLKKAGRGHSVHDVIDASKLIKEYKFILGHQIMPGLPGDTFERDIETTKESI 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               D   +Y   + K T   +M+ + + +  S   AV++  +   +   H ++   I
Sbjct: 184 KMNPDICRIYPSLVIKDTPMERMYINNEYIPYSLEEAVNVSKVMYDMYKKHNINVIRI 241


>gi|50294426|ref|XP_449624.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528938|emb|CAG62600.1| unnamed protein product [Candida glabrata]
          Length = 557

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 9/141 (6%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTETHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVKAVTET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTL 214
             +A++   ++   ++  LP   M   E +LQ+   Y        D L +Y   + +GT 
Sbjct: 280 FAIAKDAGYKVVSHMMPDLPNVGM---ERDLQQFKEYFENPAFRTDGLKIYPTLVIRGTG 336

Query: 215 FYKMHKDGDLVLPSENVAVDL 235
            Y++ K G     + N  VDL
Sbjct: 337 LYELWKTGRYKSYNANALVDL 357


>gi|218460807|ref|ZP_03500898.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 139

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 1/96 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + VY+H PFC   C YC  ++ + R      +++     E++ +    G    +  
Sbjct: 44  AAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVKY 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
           + FGGGTPS+++PQ  + ++  +   +T  +   + 
Sbjct: 104 VHFGGGTPSVMKPQEFSALMGKLRSAFTFEAKAGVA 139


>gi|153954022|ref|YP_001394787.1| hypothetical protein CKL_1397 [Clostridium kluyveri DSM 555]
 gi|219854636|ref|YP_002471758.1| hypothetical protein CKR_1293 [Clostridium kluyveri NBRC 12016]
 gi|146346903|gb|EDK33439.1| Hypothetical protein CKL_1397 [Clostridium kluyveri DSM 555]
 gi|219568360|dbj|BAH06344.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 357

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 20/256 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSISS 73
           + ++V    C   C +CD     +R   G E     NF++  + +  +++ +    S   
Sbjct: 8   IPIFVPHEGCPHSCIFCD-----QRIITGNEQKVDVNFVRRTIED--YLKTIKRSTSKVE 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNR 132
           + F GGT + I P +    L G AK +     ++ I +   P  ++       R+  V+ 
Sbjct: 61  VSFFGGTFTAI-PIDKQRELLGAAKEYKDEGYIDYIRLSTRPDYIDNYILDNLREYSVDI 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+QSL+   L    R H++ +   A +L +     +   ++  LP  T  +    ++
Sbjct: 120 IELGIQSLDSDVLLKSERGHSSEDVKYASYLVKKYGFVLGHQIMVGLPCDTFEKDMETVR 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ++    D   +Y   + KGT    M+K         + AVD+      I  A+ +    
Sbjct: 180 NSIGMKPDIYRIYPALVIKGTAMENMYKKKQYRPYRLSEAVDICKTLYCILRANKIKVIR 239

Query: 253 ISNHSFLGAESLHNLN 268
           I      G +   N+N
Sbjct: 240 I------GLQPTENIN 249


>gi|153933832|ref|YP_001384629.1| radical SAM domain-containing protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934827|ref|YP_001388146.1| radical SAM domain-containing protein [Clostridium botulinum A str.
           Hall]
 gi|152929876|gb|ABS35376.1| radical SAM domain protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152930741|gb|ABS36240.1| radical SAM domain protein [Clostridium botulinum A str. Hall]
          Length = 363

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 5/237 (2%)

Query: 19  LGVYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + ++V    C   C +C+ +     + ++  EN+++  +    +++ +    S   + F 
Sbjct: 8   IPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEVSFF 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGT + I  +    +L  +AK +     ++ I +   P  ++       ++   + I LG
Sbjct: 66  GGTFTGIPIERQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++L 
Sbjct: 125 VQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKSLE 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 185 MEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|148380411|ref|YP_001254952.1| radical SAM domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|148289895|emb|CAL84003.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC
           3502]
          Length = 363

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 5/237 (2%)

Query: 19  LGVYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + ++V    C   C +C+ +     + ++  EN+++  +    +++ +    S   + F 
Sbjct: 8   IPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEVSFF 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGT + I  +    +L  +AK +     ++ I +   P  ++       ++   + I LG
Sbjct: 66  GGTFTGIPIEKQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++L 
Sbjct: 125 VQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKSLE 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 185 MEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|114566312|ref|YP_753466.1| ELP3 component of the RNA polymerase II complex [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114337247|gb|ABI68095.1| ELP3 component of the RNA polymerase II complex [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 362

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 3/198 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD N       +  E  + S +     +  +     +   FFGG   +++E  
Sbjct: 15  CPFTCVFCDQNRISATQDIPGEMEVLSIVE--NHLATIPAGSKVEIAFFGGNF-TMVEKA 71

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              + L  I +         I I   P  ++       ++ GV  I LGVQSL ++ L+ 
Sbjct: 72  RQEMYLATINRYLQDGRVQGIRISTRPDGIDAQILDFLQQWGVRTIELGVQSLSDEVLKA 131

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R + A++   A  L +    R+   L+  LP   +      + + +    D + +Y  
Sbjct: 132 SWRGYQAADVFKACRLIKEYGFRLGIQLMIGLPGDRLELDMKTVAKVIELRPDMVRIYPT 191

Query: 208 TIEKGTLFYKMHKDGDLV 225
            +  GT   K++  G  +
Sbjct: 192 LVIAGTYLEKLYLKGKYI 209


>gi|24372904|ref|NP_716946.1| hypothetical protein SO_1326 [Shewanella oneidensis MR-1]
 gi|24347033|gb|AAN54391.1|AE015577_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 309

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQ---GYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           S  V + +   P  V  N       Y+  GV+  + LG+Q+  +++L  + R HN +   
Sbjct: 114 SEIVGLCVGTRPDCVPDNVLDLLASYQHKGVDVWLELGLQTANDKTLHHINRGHNFACYC 173

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             +  AR+   ++   LI  LP +T   +   LQ  L+  VD L L+ L + +G+   K+
Sbjct: 174 DTVSRARSRGLKVCTHLILGLPGETPLDYMATLQAVLAQGVDGLKLHPLHVVEGSTMAKV 233

Query: 219 HKDGDLVL 226
            + G L L
Sbjct: 234 WRAGRLPL 241


>gi|170757628|ref|YP_001781996.1| radical SAM domain-containing protein [Clostridium botulinum B1
           str. Okra]
 gi|169122840|gb|ACA46676.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
          Length = 363

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 5/237 (2%)

Query: 19  LGVYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + ++V    C   C +C+ +     + ++  EN+++  +    +++ +    S   + F 
Sbjct: 8   IPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEVSFF 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGT + I  +    +L  +AK +     ++ I +   P  ++       ++   + I LG
Sbjct: 66  GGTFTGIPIERQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++L 
Sbjct: 125 VQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKSLE 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 185 MEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|262068133|ref|ZP_06027745.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378221|gb|EFE85739.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQE---NFIQSFLTEMQWMRQLTGPR-SIS 72
           ++ V++    C   C +C+    + R   V  +   N I S+L         T P+ SI 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVSLDDLKNIIDSYLK--------TLPKNSIK 56

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            + F GGT + I  +     L+ + K +  +++VE + I   P  ++       +K GV 
Sbjct: 57  EVAFFGGTFTGISMELQKQYLE-VVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVK 115

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+++ L+  GR+++      +  L +     +   L+  LPK       +  
Sbjct: 116 TIELGIQSLDDEVLKATGRHYSYDVVKKSSDLIKKYGFTLGVQLMIGLPKADFKSDLISA 175

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            ++L    D   +Y   + KGT    M+K
Sbjct: 176 VKSLDLNPDIARIYPTLVIKGTELEFMYK 204


>gi|167630238|ref|YP_001680737.1| radical sam domain protein, putative [Heliobacterium modesticaldum
           Ice1]
 gi|167592978|gb|ABZ84726.1| radical sam domain protein, putative [Heliobacterium modesticaldum
           Ice1]
          Length = 389

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/271 (19%), Positives = 95/271 (35%), Gaps = 25/271 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMR-QLTGPRSISSI---------- 74
           C  +C YC          +     +   +      W R +L GP + +            
Sbjct: 12  CPGRCLYCSQEGLTGEAGLPGPERVDEIVRRYLGSWKRARLAGPAAFAGAVAKGEVHEIA 71

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRI 133
           FFGG    L  P ++   L   AK W     +  + +   P  ++    +  R  GV  +
Sbjct: 72  FFGGSFTML--PGDVQESLLAAAKRWLGREGIGGVRLSTRPDGIDKATVERLRHYGVTVV 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G QS+    L   GR H  ++ + A+ L R    ++   L+  LP          LQ 
Sbjct: 130 EVGAQSMHAWVLERSGRGHGPADTVRALDLLRRGGLQVGIHLMTGLPGDDEAGALSSLQE 189

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH------- 246
            L    D L ++   + K +   ++ + G          + L +   ++   H       
Sbjct: 190 CLWLKPDFLRIHPTLVLKESPLERLWRAGAYQPWGWGRTLRLLSRMAALCVCHRVPVIRW 249

Query: 247 GLHAYEISNHSFLGAESLHNLNYW--RYGDY 275
           GL   E+ + + L   +  +L  W  RY  Y
Sbjct: 250 GLMPGELCDRATLAGPASPSLGEWVRRYLAY 280


>gi|261403081|ref|YP_003247305.1| histone acetyltransferase, ELP3 family [Methanocaldococcus
           vulcanius M7]
 gi|261370074|gb|ACX72823.1| histone acetyltransferase, ELP3 family [Methanocaldococcus
           vulcanius M7]
          Length = 536

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P            K G  R+ LG Q++  + L    R H   + I A  L +
Sbjct: 204 VALCIETRPDCCGKEEINQMLKLGTTRVELGAQTIYNEILELCKRGHTVEDTIKATQLLK 263

Query: 166 NIFPRMSFDLIYALP---KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++S+ L+  +P   +    +   E+     +  D + +Y   + +GT  Y++ K+G
Sbjct: 264 DSGLKVSYHLMPGMPGSDRDMDKKMFKEIFNNPDFKPDMVKIYPCLVIEGTELYELWKEG 323

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                 E  A+++ +  +SI
Sbjct: 324 LYKPYREEEAIEIISYAKSI 343


>gi|84393235|ref|ZP_00991997.1| hypothetical protein V12B01_08547 [Vibrio splendidus 12B01]
 gi|84376141|gb|EAP93027.1| hypothetical protein V12B01_08547 [Vibrio splendidus 12B01]
          Length = 317

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 2/123 (1%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV +    GY K G    + LG+Q+  +++L+ + R H+ +        AR +  ++ 
Sbjct: 125 PDSV-LELLSGYVKQGYEIWLELGLQTANDKTLKRINRGHDFAVYETITRRARALGIKIC 183

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI  LPK+T       L + L+   D + L+ L I +G+   K  K G L  PS    
Sbjct: 184 THLIVGLPKETKADNLETLDKVLAVGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEY 243

Query: 233 VDL 235
           +D+
Sbjct: 244 IDI 246


>gi|18312276|ref|NP_558943.1| hypothetical protein PAE0922 [Pyrobaculum aerophilum str. IM2]
 gi|18159720|gb|AAL63125.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 471

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T+E  P  +         K GV R+ LGVQS+ +  L+ + R H A+E + A  + +
Sbjct: 131 VALTVETRPDFINKAEVDFLLKLGVTRVELGVQSIYDDVLQKVKRGHGAAEVVEATAILK 190

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGT 213
           +   ++ + ++  LP     + ++E+ R +    SY  D + +Y L +   T
Sbjct: 191 DSAYKVCYHVMPGLPGSDPDR-DLEMVREIFSNPSYMPDCVKIYPLYVVPNT 241


>gi|317486580|ref|ZP_07945401.1| TIGR01212 family radical SAM protein [Bilophila wadsworthia 3_1_6]
 gi|316922180|gb|EFV43445.1| TIGR01212 family radical SAM protein [Bilophila wadsworthia 3_1_6]
          Length = 312

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 54/103 (52%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LGVQ+L + +LR + R H+A+ +  AI LA     ++   L+  LP +T       ++
Sbjct: 157 LELGVQTLNDATLRRINRGHDAAASAKAIELAEKTNVQVCAHLMLGLPGETPDDVHATVR 216

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           R  +  V  + L+ + + + T   + ++ G+ V  +E+  V+L
Sbjct: 217 RLNALPVHGVKLHNVYVCRNTALERAYRAGEYVPLTEDAYVEL 259


>gi|19115774|ref|NP_594862.1| elongator complex, histone acetyltransferase subunit Elp3
           (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74626625|sp|O14023|ELP3_SCHPO RecName: Full=Probable elongator complex protein 3
 gi|2239229|emb|CAB10146.1| elongator complex, histone acetyltransferase subunit Elp3
           (predicted) [Schizosaccharomyces pombe]
          Length = 544

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA+
Sbjct: 213 VGITIETRPDYCLDQHLDEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFQLAK 272

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L LY   + +GT  Y++ K G
Sbjct: 273 DTGYKVVTHMMPDLPNVGMERDIFQFQEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTG 332

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 333 RYKNYTPNALVDL 345


>gi|21228076|ref|NP_633998.1| histone acetyltransferase [Methanosarcina mazei Go1]
 gi|20906512|gb|AAM31670.1| histone acetyltransferase [Methanosarcina mazei Go1]
          Length = 555

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 5/135 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P      +   + + G  ++ +GVQS+ +  L  + R H  +E + A  + 
Sbjct: 223 NVGITFETRPDWAREEHVDEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVL 282

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHK 220
           R+   ++ F ++  LP    ++ ++   + L     +  D+L +Y   + +GT  Y+M K
Sbjct: 283 RDSAFKVGFHMMPHLPGAD-SELDLRGFKKLFDDQRFRPDYLKIYPTLVTEGTPLYRMWK 341

Query: 221 DGDLVLPSENVAVDL 235
            G+    S+  A +L
Sbjct: 342 SGEYQALSDEEAAEL 356


>gi|168231940|ref|ZP_02656998.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194472127|ref|ZP_03078111.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458491|gb|EDX47330.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205333794|gb|EDZ20558.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 309

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +  ++    LQR +   VD L L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQSECLQTLQRVVETGVDGLKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|126173417|ref|YP_001049566.1| putative radical SAM protein [Shewanella baltica OS155]
 gi|304409341|ref|ZP_07390961.1| conserved hypothetical protein [Shewanella baltica OS183]
 gi|307303699|ref|ZP_07583452.1| conserved hypothetical protein [Shewanella baltica BA175]
 gi|125996622|gb|ABN60697.1| conserved hypothetical radical SAM protein [Shewanella baltica
           OS155]
 gi|304351859|gb|EFM16257.1| conserved hypothetical protein [Shewanella baltica OS183]
 gi|306912597|gb|EFN43020.1| conserved hypothetical protein [Shewanella baltica BA175]
          Length = 309

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+  +   V + +   P  V  N       Y+  GV+
Sbjct: 89  YFQAYTSTYDEYQVLMAKYDEAVKDGEI---VGLCVGTRPDCVPDNVLDLLASYQANGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+ ++++LR + R H+ +     +  AR+   ++   LI  LP +T + +   
Sbjct: 146 VWLELGLQTAKDETLRKINRGHDFACYCDTVSRARSRGLKVCTHLILGLPDETHSDYMAT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           L   L   VD L L+ L + +G+   K  + G L L S
Sbjct: 206 LAAVLQQGVDGLKLHPLHVVEGSTMAKAWRSGRLPLLS 243


>gi|308503801|ref|XP_003114084.1| CRE-ELPC-3 protein [Caenorhabditis remanei]
 gi|308261469|gb|EFP05422.1| CRE-ELPC-3 protein [Caenorhabditis remanei]
          Length = 559

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS  E   R   R H         H+A+
Sbjct: 226 IGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAK 285

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   + + +   +EL  + ++  D L LY   + +GT  Y++ K G
Sbjct: 286 DTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTG 345

Query: 223 DLVLPSENVAVDL 235
                  +V VDL
Sbjct: 346 RYQSYPPSVLVDL 358


>gi|153939570|ref|YP_001391752.1| radical SAM domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|152935466|gb|ABS40964.1| radical SAM domain protein [Clostridium botulinum F str. Langeland]
 gi|295319776|gb|ADG00154.1| radical SAM domain protein [Clostridium botulinum F str. 230613]
          Length = 363

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 98/239 (41%), Gaps = 9/239 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + ++V    C   C +C  N H     + ++  EN+++  +    +++ +    S   + 
Sbjct: 8   IPIFVAQEGCPHNCVFC--NQHKITGEKNEMIDENYVRETIE--AYIKTIDRENSTLEVS 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGT + I  +    +L  +AK +     ++ I +   P  ++       +K   + I 
Sbjct: 64  FFGGTFTGIPIERQKSLL-KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEYMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|133955098|ref|NP_506055.2| ELongator complex Protein Component family member (elpc-3)
           [Caenorhabditis elegans]
 gi|122120457|sp|Q23651|ELP3_CAEEL RecName: Full=Probable elongator complex protein 3
 gi|110431062|emb|CAB01454.2| C. elegans protein ZK863.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 547

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS  E   R   R H         H+A+
Sbjct: 212 IGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAK 271

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   + + +   +EL  + ++  D L LY   + +GT  Y++ K G
Sbjct: 272 DTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTG 331

Query: 223 DLVLPSENVAVDL 235
                  +V VDL
Sbjct: 332 RYQSYPPSVLVDL 344


>gi|222056763|ref|YP_002539125.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221566052|gb|ACM22024.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 624

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +   LR +GR  N  +    I +  N+     FDLIY LP  ++  +   L 
Sbjct: 285 LQIGLQSADPLVLRNVGRVFNRQDFSIKIGMLNNVGAIFGFDLIYGLPGDSLAGFRQSLD 344

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
            ALS   +HL ++ L +  GT
Sbjct: 345 FALSLYPNHLDIFPLAVLPGT 365


>gi|268557392|ref|XP_002636685.1| C. briggsae CBR-ELPC-3 protein [Caenorhabditis briggsae]
 gi|74845841|sp|Q60LW7|ELP3_CAEBR RecName: Full=Probable elongator complex protein 3
 gi|309371185|emb|CAP39624.3| CBR-ELPC-3 protein [Caenorhabditis briggsae AF16]
          Length = 548

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS  E   R   R H         H+A+
Sbjct: 212 IGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAK 271

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   + + +   +EL  + ++  D L LY   + +GT  Y++ K G
Sbjct: 272 DTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTG 331

Query: 223 DLVLPSENVAVDL 235
                  +V VDL
Sbjct: 332 RYQSYPPSVLVDL 344


>gi|303243626|ref|ZP_07329967.1| conserved hypothetical protein [Methanothermococcus okinawensis
           IH1]
 gi|302485868|gb|EFL48791.1| conserved hypothetical protein [Methanothermococcus okinawensis
           IH1]
          Length = 362

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEME 190
           I LG+QS+ +++L FL R HN S+ I AI+    RNIF  +   +I  LP +T       
Sbjct: 198 IDLGIQSMHQRTLDFLNRRHNVSDTIKAINNCKKRNIF--VCGHVILGLPNETWDDMIKT 255

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
            Q      +D L +Y L + + T
Sbjct: 256 AQILSDLEIDALKIYPLVVIQNT 278


>gi|152999756|ref|YP_001365437.1| putative radical SAM protein [Shewanella baltica OS185]
 gi|151364374|gb|ABS07374.1| conserved hypothetical radical SAM protein [Shewanella baltica
           OS185]
          Length = 309

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+  +   V + +   P  V  N       Y+  GV+
Sbjct: 89  YFQAYTSTYDEYQVLMAKYDEAVKDGEI---VGLCVGTRPDCVPDNVLDLLASYQANGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+ ++++LR + R H+ +     +  AR    ++   LI  LP +T + + + 
Sbjct: 146 VWLELGLQTAKDETLRKINRGHDFACYCDTVSRARARGLKVCTHLILGLPDETHSDYMVT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           L   L   VD L L+ L + +G+   K  + G L L S
Sbjct: 206 LAAVLQQGVDGLKLHPLHVVEGSTMAKAWRSGRLPLLS 243


>gi|312127785|ref|YP_003992659.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777804|gb|ADQ07290.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 341

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 8/163 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++    +  +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDEERLRLLKLYNVRTIELGIQSMFDDVLNACARGHTAQHSKNAMEMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +   ++  LPK T  + ++E  + L S++ D   +Y   + +GT   KM++ G+   
Sbjct: 148 GFLLGVQVMVGLPKST-PEKDIETAKILTSFSPDIARIYPTLVIEGTYLAKMYRRGEYEP 206

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
            S N AV+  +  +SI    G++   +      G +    +NY
Sbjct: 207 LSLNEAVERCSQIKSIFIEKGINVIRV------GLQPTEEINY 243


>gi|253698732|ref|YP_003019921.1| radical SAM protein [Geobacter sp. M21]
 gi|251773582|gb|ACT16163.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 616

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +   LR +GR  +  + +    L         FDLIY LP  ++  +   L 
Sbjct: 282 LQIGLQSADPAVLRGVGRGFDRDDFVMRASLLNRTGAIFGFDLIYGLPGDSLKLFRSSLD 341

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            ALS   +HL ++ L +  GT   ++H   D  L  E++    Y +  S T
Sbjct: 342 FALSLYPNHLDIFPLAVLPGT---RLHAKAD-ALGLEHLKTPPYTVLSSAT 388


>gi|269469069|gb|EEZ80624.1| Fe-S oxidoreductase [uncultured SUP05 cluster bacterium]
          Length = 303

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++L+ + R H   E    +  AR    R+   LI  LP +  T ++  LQ
Sbjct: 144 LELGLQSAFDKTLKRINRGHGFEEYRQTLLAARGKGLRVCTHLIIGLPGENETHFKATLQ 203

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
           R L+  VD L  + L + KGT
Sbjct: 204 RVLNLGVDGLKFHPLHVVKGT 224


>gi|206895763|ref|YP_002246862.1| oxygen-independent coproporphyrinogen III oxidase
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738380|gb|ACI17458.1| oxygen-independent coproporphyrinogen III oxidase
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 258

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 9/202 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           V++    C ++C +C+      R K  +E+  ++F     ++++         I F GGT
Sbjct: 6   VFLSHAGCRQRCVFCN-QRAAERIKPWKESIEEAF----HYIQKSN--LVYDEIAFYGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+  E   +  IL        +     I I   P  +  +  Q     GV+ + +GV+S 
Sbjct: 59  PTSSE-NLLKDILQPFQTFLKIGKIKGIRISTRPDEINESIIQILVDYGVSTVEIGVESF 117

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++ LR   R H   +   A  L +  F R  F L+  LP +T    E  + + +S    
Sbjct: 118 SDEVLRLSKRGHTEEDVKRAHELLKGRF-REVFQLMVGLPGETDRHREETISKTVSLKPW 176

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            +  +   + +GT   KM++ G
Sbjct: 177 GVRYFPTLVLRGTELQKMYESG 198


>gi|20071431|gb|AAH26461.1| Elp3 protein [Mus musculus]
          Length = 468

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  V ITIE  P      +       G  R+ +GVQS+ E   R   R H    A  +
Sbjct: 132 SFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACES 191

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++   ++   ++  LP    ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 192 FHLAKDSGFKVVTHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 250

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 251 ELWKSG 256


>gi|302872012|ref|YP_003840648.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574871|gb|ADL42662.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 341

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++    +  +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDEERLRFLKLYNVKTIELGIQSMFDDVLNACARGHTAQHSKNAMAMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +   ++  LPK T+ + ++E  + L S++ D   +Y   + +GT   KM++ G+   
Sbjct: 148 GFLLGVQVMVGLPKSTL-EKDIETAKILTSFSPDIARVYPTLVIEGTYLAKMYQRGEYEP 206

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
            S N AV+  +  +SI    G++   +      G +    +NY
Sbjct: 207 LSLNEAVERCSQIKSIFIEKGVNVIRV------GLQPTEEINY 243


>gi|255931935|ref|XP_002557524.1| Pc12g06860 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582143|emb|CAP80313.1| Pc12g06860 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 575

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 236 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 295

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L LY   + +GT  Y++ + G
Sbjct: 296 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPNFRTDGLKLYPTLVIRGTGLYELWRTG 355

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 356 RYKNYTPNALIDL 368


>gi|20089710|ref|NP_615785.1| histone acetyltransferase [Methanosarcina acetivorans C2A]
 gi|19914640|gb|AAM04265.1| histone acetyltransferase [Methanosarcina acetivorans C2A]
          Length = 547

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P      +   + + G  ++ LGVQS+ +  L  + R H  +E + A  + 
Sbjct: 215 NVGITFETRPDWAAEEHVDEFLRLGGTKVELGVQSVYDFILTRMQRGHGVAEIVRANRVL 274

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFYKM 218
           R+   ++ F ++  LP       E++L+          +  D+L +Y   + +GT  Y+M
Sbjct: 275 RDSAFKVGFHMMPHLPG---ANSELDLRGFKKLFEDPRFRPDYLKIYPTLVTEGTALYRM 331

Query: 219 HKDGDLVLPSENVAVDLYNLTQSI 242
            + G+    S+  A +L    +S+
Sbjct: 332 WEAGEYQALSDEEAAELVADIKSV 355


>gi|50310033|ref|XP_455030.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644165|emb|CAH00117.1| KLLA0E23937p [Kluyveromyces lactis]
          Length = 561

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVQSVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             +A++   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y+
Sbjct: 280 FAVAKDAGYKIVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     + N  VDL
Sbjct: 340 LWKTGRYKSYNANALVDL 357


>gi|296126486|ref|YP_003633738.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
 gi|296018302|gb|ADG71539.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
          Length = 313

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 14/124 (11%)

Query: 133 ISLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEM 189
           + +G+QS  +++  F+ R HN  S A    H+ +N +P +     +I+ LPK+ + +  +
Sbjct: 140 LEMGLQSSNDETSLFINRGHNYKSFADTVKHIKKN-YPNLIICTHVIFGLPKKFIDEKNI 198

Query: 190 ELQR----------ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           EL+R            S  +D +  +QL I KG+ F  M+K+    +  E+  +DL    
Sbjct: 199 ELERREDMLQTVKDISSIEIDAVKFHQLDIVKGSYFENMYKEYHFPVLDEDFYIDLMCEA 258

Query: 240 QSIT 243
            S+T
Sbjct: 259 ISLT 262


>gi|147919130|ref|YP_687137.1| histone acetyltransferase [uncultured methanogenic archaeon RC-I]
 gi|110622533|emb|CAJ37811.1| histone acetyltransferase [uncultured methanogenic archaeon RC-I]
          Length = 531

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 11/172 (6%)

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FGG      EP     I +    N T S  NV +T E  P      +       G  ++ 
Sbjct: 179 FGG------EPHPTYFIEEAQKANETASIRNVAMTFETRPDWCREIHVDRMLNMGGTKVE 232

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT---QWEMEL 191
           LGVQS  +  L+ + R H+ ++++ A  + R+   ++ F ++  LP        +   EL
Sbjct: 233 LGVQSTYDFVLKRIERGHSVADSVEANRILRDSGFKIGFHMMPGLPGSDFERDLRMFKEL 292

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSI 242
                +  D+L +Y   + +GT  + M + G+   L S++ AV +  +  S+
Sbjct: 293 FEDSRFCPDYLKIYPTLVTEGTKLHDMWERGEYKPLSSDDAAVLIAQIKASL 344


>gi|306819681|ref|ZP_07453342.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304552247|gb|EFM40177.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 330

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 8/195 (4%)

Query: 28  CVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C+      ++  +  E   +  +  +  M++      I  I F GG+ + IE 
Sbjct: 3   CPNDCIFCNQVKISGQKTLLDYEAMREGIMDSISTMKE----TDIVEIAFFGGSFTAIEK 58

Query: 87  QNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +     L  +A +    +   V++ +   P +++    +   +  V+ + LGVQS++++ 
Sbjct: 59  EVQERCL-SLANDIAGQIGRQVQVKLSTRPDAIDEEVIERLLRHKVDTVELGVQSMDDEV 117

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR   R H++     A  L R    ++   L+  L   T  +    +Q+ +    D   +
Sbjct: 118 LRLNNRGHDSKSVYDACKLIRKTNIKLGLQLMIGLLGDTKEKLYQTIQKVVDIGPDIARI 177

Query: 205 YQLTIEKGTLFYKMH 219
           Y + + K T   +++
Sbjct: 178 YPVLVIKDTTLERLY 192


>gi|170289789|ref|YP_001736605.1| ELP3 family histone acetyltransferase [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170173869|gb|ACB06922.1| histone acetyltransferase, ELP3 family [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 471

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 15/147 (10%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           SLIE Q +         N T S   V +T+E  P     ++       G  R+ LGVQS+
Sbjct: 122 SLIEAQEL---------NETSSVRCVAMTLETRPDWAMEDHVDKMLYLGFTRVELGVQSI 172

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----S 196
            E  L  + R H+  + I A  + ++   ++ + L+  LP   + + ++E  R +    S
Sbjct: 173 YEDVLERVRRGHSTIDTIVATRILKDSAYKVGYHLMPGLPGSDLDR-DLEALRIVLSDPS 231

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +  D L +Y   +  GT  Y M + G+
Sbjct: 232 FRPDMLKIYPTLVIPGTPLYDMWRRGE 258


>gi|55962342|emb|CAI12039.1| novel protein similar to vertebrate elongation protein 3 homolog
           (S. cerevisiae) (ELP3) [Danio rerio]
          Length = 528

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HLA+
Sbjct: 202 VGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAK 261

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 262 DAGFKVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 321

Query: 223 DLVLPSENVAVDL 235
                S +  VDL
Sbjct: 322 RYKSYSPSALVDL 334


>gi|213410132|ref|XP_002175836.1| elongator complex, histone acetyltransferase subunit Elp3
           [Schizosaccharomyces japonicus yFS275]
 gi|212003883|gb|EEB09543.1| elongator complex, histone acetyltransferase subunit Elp3
           [Schizosaccharomyces japonicus yFS275]
          Length = 544

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA+
Sbjct: 213 VGITIETRPDYCWDQHLDEMLRYGCTRLEVGVQSVYEDVARDTNRGHTVKAVCETFQLAK 272

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L LY   + +GT  Y++ K G
Sbjct: 273 DAGYKVVTHMMPDLPNVGMERDIFQFQEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTG 332

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 333 RYKNYTPNALVDL 345


>gi|68989265|ref|NP_001014344.2| elongator complex protein 3 [Danio rerio]
 gi|148887372|sp|Q5RIC0|ELP3_DANRE RecName: Full=Elongator complex protein 3
 gi|66911246|gb|AAH96810.1| Elongation protein 3 homolog (S. cerevisiae) [Danio rerio]
 gi|182890792|gb|AAI65402.1| Elp3 protein [Danio rerio]
          Length = 548

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HLA+
Sbjct: 217 VGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAK 276

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 277 DAGFKVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 336

Query: 223 DLVLPSENVAVDL 235
                S +  VDL
Sbjct: 337 RYKSYSPSALVDL 349


>gi|26353468|dbj|BAC40364.1| unnamed protein product [Mus musculus]
          Length = 566

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  V ITIE  P      +       G  R+ +GVQS+ E   R   R H    A  +
Sbjct: 230 SFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACES 289

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++   ++   ++  LP    ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 290 FHLAKDSGFKVVTHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 348

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 349 ELWKSG 354


>gi|148704072|gb|EDL36019.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_a [Mus
           musculus]
          Length = 525

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  V ITIE  P      +       G  R+ +GVQS+ E   R   R H    A  +
Sbjct: 211 SFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVTHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|148704074|gb|EDL36021.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_c [Mus
           musculus]
          Length = 591

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  V ITIE  P      +       G  R+ +GVQS+ E   R   R H    A  +
Sbjct: 255 SFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACES 314

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++   ++   ++  LP    ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 315 FHLAKDSGFKVVTHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 373

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 374 ELWKSG 379


>gi|156935734|ref|YP_001439650.1| hypothetical protein ESA_03604 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533988|gb|ABU78814.1| hypothetical protein ESA_03604 [Cronobacter sakazakii ATCC BAA-894]
          Length = 311

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 12/210 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI-A 90
           C +C+  S     +  Q   IQ  LT+ Q  R     R ++  +F   T +  E   + A
Sbjct: 45  CTFCNVASFADETQ--QHLSIQQQLTQ-QAARVDRARRYLA--YFQAYTSTFAEVNVLRA 99

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLG 149
           +    I++   V   V    +  P SV ++   GY + G    + LG+QS ++++L  + 
Sbjct: 100 MYQQAISQADIVGLCVGTRPDCVPESV-LDLLAGYHEQGYEVWLELGLQSAKDKTLHRIN 158

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+ +        AR    ++   LI  LP +T +     L+R +   VD + L+ L I
Sbjct: 159 RGHDFACYQGTTRRARARGLQVCTHLIVGLPGETRSDALTSLERVVETGVDGIKLHPLHI 218

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            +G++  K  + G L      +A+D Y +T
Sbjct: 219 VEGSIMAKAWRAGRL----SGIALDDYTVT 244


>gi|33469023|ref|NP_083087.1| elongator complex protein 3 [Mus musculus]
 gi|81881127|sp|Q9CZX0|ELP3_MOUSE RecName: Full=Elongator complex protein 3
 gi|12848586|dbj|BAB28009.1| unnamed protein product [Mus musculus]
 gi|34785782|gb|AAH57453.1| Elongation protein 3 homolog (S. cerevisiae) [Mus musculus]
 gi|148704073|gb|EDL36020.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_b [Mus
           musculus]
          Length = 547

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  V ITIE  P      +       G  R+ +GVQS+ E   R   R H    A  +
Sbjct: 211 SFTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVTHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|323331223|gb|EGA72641.1| Elp3p [Saccharomyces cerevisiae AWRI796]
          Length = 448

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             ++++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 280 FAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     S N  VDL
Sbjct: 340 LWKTGRYKSYSANALVDL 357


>gi|323451696|gb|EGB07572.1| hypothetical protein AURANDRAFT_27185 [Aureococcus anophagefferens]
          Length = 601

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P +++ +  +  R  G  R+ LGVQ ++   L  + R H  +E   A+ L +
Sbjct: 208 IGLTLETRPDTIDEDEIRLLRSYGCTRVQLGVQHVDAAVLDRVNRGHGRAETATALRLLK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY----AVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   L+  LP  T    ++ +  A+ Y      D   +Y   +   T+  K   +
Sbjct: 268 DACYKVDIHLMPNLPGAT-PAVDLAMFDAVLYDEDLQADQWKIYPCEVTPWTVIKKWFDE 326

Query: 222 GDLVLPSENVAVDL 235
           G  V  +E+  V+L
Sbjct: 327 GSYVPYAEDALVEL 340


>gi|330507860|ref|YP_004384288.1| histone acetyltransferase, ELP3 family protein [Methanosaeta
           concilii GP-6]
 gi|328928668|gb|AEB68470.1| histone acetyltransferase, ELP3 family protein [Methanosaeta
           concilii GP-6]
          Length = 515

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%)

Query: 97  AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE 156
           A    +  N+  T E  P      + +   + G  ++ LGVQSL+E  L  + R H   +
Sbjct: 193 ANESALVRNIGTTFETRPDWCRPRDIEEMLRLGATKVELGVQSLDEDLLVRMKRGHKVED 252

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKG 212
           A  A    R    ++ F ++  LP  +    ++ + R L     +  D+L +Y   + +G
Sbjct: 253 AAQASANLREAGLKVGFHMMPGLPGSS-PDLDLAVFRELFSDSRFRPDYLKIYPTLVIEG 311

Query: 213 TLFYKMHKDGDLVLPSENVAVDLYN 237
           T  Y+ +  G+     ++ A +L +
Sbjct: 312 TELYRQYLRGEYTPLGDDDAAELVS 336


>gi|254577911|ref|XP_002494942.1| ZYRO0A13420p [Zygosaccharomyces rouxii]
 gi|238937831|emb|CAR26009.1| ZYRO0A13420p [Zygosaccharomyces rouxii]
          Length = 561

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQS+ E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDLLKYGCTRLEIGVQSIYEDVARDTNRGHTVRAVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             +A++   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y+
Sbjct: 280 FSVAKDCGYKVVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     + N  VDL
Sbjct: 340 LWKTGRYKSYNANALVDL 357


>gi|114048443|ref|YP_738993.1| putative radical SAM protein [Shewanella sp. MR-7]
 gi|113889885|gb|ABI43936.1| conserved hypothetical radical SAM protein [Shewanella sp. MR-7]
          Length = 309

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 4/130 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQ---GYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           S  V + +   P  V  N       Y++ GV+  + LG+Q+  +++L  + R H+ +   
Sbjct: 114 SEIVGLCVGTRPDCVPDNVLDLLASYQQKGVDVWLELGLQTANDKTLHKINRGHDFACYC 173

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             +  AR+   ++   LI  LP +T   +   LQ  L+  VD L L+ L + +G+   K 
Sbjct: 174 NTVARARSRGLKVCTHLILGLPGETHLDYMATLQAVLAQGVDGLKLHPLHVVEGSTMAKA 233

Query: 219 HKDGDLVLPS 228
            + G L L S
Sbjct: 234 WRAGRLPLLS 243


>gi|71030146|ref|XP_764715.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68351671|gb|EAN32432.1| hypothetical protein, conserved [Theileria parva]
          Length = 884

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T+E  P  +     +  R+ G  R+ LG+Q   +  L ++ R H   ++I AI+L +  
Sbjct: 406 LTLETRPDRINPTEIELLRRFGCTRVQLGIQHTNDSILEYVNRGHTTQDSIKAIYLLKEN 465

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             ++   ++  LP  +  Q ++E+ + +       VD   +Y   +   +   K HK+G 
Sbjct: 466 CFKVDIHIMPDLP-SSNPQEDLEMFKYILSSKDLQVDQWKIYPCEVTPFSEIEKWHKEGK 524

Query: 224 LV 225
            +
Sbjct: 525 YI 526


>gi|121712678|ref|XP_001273950.1| histone acetyltransferase, putative [Aspergillus clavatus NRRL 1]
 gi|119402103|gb|EAW12524.1| histone acetyltransferase, putative [Aspergillus clavatus NRRL 1]
          Length = 576

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 236 VGITIETRPDYCLDTHLSDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 295

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 296 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 355

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 356 RYKNYTPNALVDL 368


>gi|47575742|ref|NP_001001215.1| elongator complex protein 3 [Xenopus (Silurana) tropicalis]
 gi|82185664|sp|Q6NVL5|ELP3_XENTR RecName: Full=Elongator complex protein 3
 gi|45709737|gb|AAH67990.1| elongation protein 3 homolog (S. cerevisiae) [Xenopus (Silurana)
           tropicalis]
          Length = 549

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H+A+
Sbjct: 218 VGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHMAK 277

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +   T+  +E     ++  D + LY   + +GT  Y++ K G
Sbjct: 278 DAGFKVVSHMMPDLPNVGLERDTEQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTG 337

Query: 223 DLVLPSENVAVDL 235
                S +  VDL
Sbjct: 338 RYRSYSPSTLVDL 350


>gi|3599396|gb|AAC62701.1| hypothetical protein [Cenarchaeum symbiosum]
          Length = 522

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
            V  NV +TIE  P      +       G  R+ +GVQSL E+    + R H   +   +
Sbjct: 194 AVHRNVGLTIETKPDYCRTEHVDAMLGFGATRVEIGVQSLREEVYLRVNRGHGYQDVTES 253

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFY 216
              AR+   +++  ++  LP  T  + ++E  R L    +   D L +Y   + +GT  Y
Sbjct: 254 FAAARDAGYKVAAHMMPGLPGAT-PEGDIEDLRMLFEDPALRPDMLKVYPALVVRGTPMY 312

Query: 217 KMHKDGD 223
           + +  G+
Sbjct: 313 EEYSRGE 319


>gi|169765191|ref|XP_001817067.1| elongator complex protein 3 [Aspergillus oryzae RIB40]
 gi|238503512|ref|XP_002382989.1| histone acetyltransferase, putative [Aspergillus flavus NRRL3357]
 gi|83764921|dbj|BAE55065.1| unnamed protein product [Aspergillus oryzae]
 gi|220690460|gb|EED46809.1| histone acetyltransferase, putative [Aspergillus flavus NRRL3357]
          Length = 575

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 235 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 294

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 295 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 354

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 355 RYKNYTPNALVDL 367


>gi|323346201|gb|EGA80491.1| Elp3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 542

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             ++++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 280 FAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     S N  VDL
Sbjct: 340 LWKTGRYKSYSANALVDL 357


>gi|312135001|ref|YP_004002339.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775052|gb|ADQ04539.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 341

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 8/163 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++    +  +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDDERLRLLKLYNVRTIELGIQSMFDDVLNACARGHTAQHSKNAMEMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +   ++  LPK T  + ++E  + L S++ D   +Y   + +GT   KM++ G+   
Sbjct: 148 GFLLGVQVMVGLPKST-PEKDIETAKILTSFSPDIARIYPTLVIEGTYLAKMYQRGEYEP 206

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
            S N AV+  +  +SI    G++   +      G +    +NY
Sbjct: 207 LSLNEAVERCSQIKSIFIEKGVNVIRV------GLQPTEEINY 243


>gi|207340547|gb|EDZ68864.1| YPL086Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 469

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             ++++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 280 FAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     S N  VDL
Sbjct: 340 LWKTGRYKSYSANALVDL 357


>gi|119498527|ref|XP_001266021.1| histone acetyltransferase, putative [Neosartorya fischeri NRRL 181]
 gi|119414185|gb|EAW24124.1| histone acetyltransferase, putative [Neosartorya fischeri NRRL 181]
          Length = 576

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 236 VGITIETRPDYCLDTHLSDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 295

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 296 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 355

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 356 RYKNYTPNALVDL 368


>gi|258572072|ref|XP_002544814.1| hypothetical protein UREG_04331 [Uncinocarpus reesii 1704]
 gi|237905084|gb|EEP79485.1| hypothetical protein UREG_04331 [Uncinocarpus reesii 1704]
          Length = 562

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 238 VGITIETRPDYCLDTHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 298 DAGFKVVSHMMPDLPNMGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 357

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 358 RYKNYTPNALIDI 370


>gi|160934421|ref|ZP_02081808.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
 gi|156867094|gb|EDO60466.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 10/212 (4%)

Query: 28  CVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +CD  S     RR + G+   + + L + +  + L G +  S I F GG+ + +
Sbjct: 10  CPHQCSFCDQKSITGESRRVEPGE---VAAVLEDAR--QALRGKQKASEIAFFGGSFTAV 64

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P     +L              I I   P +++    +  ++ GV  I LG QS++++ 
Sbjct: 65  PPAYQESLLKAAYPFVKRGDFSGIRISTRPDAIDPPVLERLKQYGVKSIELGAQSMDDRV 124

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL-PKQTMTQWEMELQRALSYAVDHLS 203
           L    R H A + + A  + R     +   ++  L      + W+   +  L    D + 
Sbjct: 125 LVLNQRGHTAQDVVNASRMIREYGFSLGLQMMTGLYGSSPESDWQTGKKLVLCKP-DCVR 183

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +Y   + KGT   + ++ G    P    ++ L
Sbjct: 184 IYPTVVLKGTKLGEYYEAGLYSPPDAEQSIPL 215


>gi|189425003|ref|YP_001952180.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421262|gb|ACD95660.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 374

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 5/196 (2%)

Query: 28  CVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C  N H +   +    +  Q   T  QW+ +   P   + + F GG+ +L+  
Sbjct: 15  CPHTCLFC--NQHMISGAQQSVPSARQISETVQQWLGR--SPNRAAEVAFYGGSFTLLPR 70

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +    +L+ +           I I   P +++           V  I +GVQSL++  L 
Sbjct: 71  KQQEQLLEAVQPLLEQQKIRNIRISTRPDALDEAVLAFLAGHKVTTIEVGVQSLDDLVLL 130

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
              R H A++++AAI   R+   ++   L+  LP  T  +    +Q  ++     + +Y 
Sbjct: 131 QSNRGHTAADSMAAIQRVRSAGFQVGAQLLPGLPGDTRAKALASVQGVIAAGAQFVRIYP 190

Query: 207 LTIEKGTLFYKMHKDG 222
             +  GT     ++ G
Sbjct: 191 AVVLSGTALADQYRAG 206


>gi|6325171|ref|NP_015239.1| Elp3p [Saccharomyces cerevisiae S288c]
 gi|74676324|sp|Q02908|ELP3_YEAST RecName: Full=Elongator complex protein 3; AltName:
           Full=Gamma-toxin target 3
 gi|1151240|gb|AAB68213.1| Ypl086cp [Saccharomyces cerevisiae]
 gi|151942711|gb|EDN61057.1| RNA polymerase II Elongator subunit [Saccharomyces cerevisiae
           YJM789]
 gi|190407869|gb|EDV11134.1| RNA polymerase II Elongator subunit [Saccharomyces cerevisiae
           RM11-1a]
 gi|256269974|gb|EEU05225.1| Elp3p [Saccharomyces cerevisiae JAY291]
 gi|259150072|emb|CAY86875.1| Elp3p [Saccharomyces cerevisiae EC1118]
 gi|285815455|tpg|DAA11347.1| TPA: Elp3p [Saccharomyces cerevisiae S288c]
 gi|323302750|gb|EGA56556.1| Elp3p [Saccharomyces cerevisiae FostersB]
 gi|323335053|gb|EGA76343.1| Elp3p [Saccharomyces cerevisiae Vin13]
          Length = 557

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             ++++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 280 FAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     S N  VDL
Sbjct: 340 LWKTGRYKSYSANALVDL 357


>gi|86129488|ref|NP_001034382.1| elongator complex protein 3 [Gallus gallus]
 gi|75571184|sp|Q5ZHS1|ELP3_CHICK RecName: Full=Elongator complex protein 3
 gi|53136786|emb|CAG32722.1| hypothetical protein RCJMB04_33o1 [Gallus gallus]
          Length = 546

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 210 SLTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 269

Query: 161 IHLARNIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            HLA++   ++   ++  LP   +   T   +E     ++  D + LY   + +GT  Y+
Sbjct: 270 FHLAKDAGFKVVAHMMPDLPNMGLERDTDQFVEFFENPAFRPDGMKLYPTLVIRGTGLYE 329

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G       +  VDL
Sbjct: 330 LWKTGRYKSYPPSTLVDL 347


>gi|117921487|ref|YP_870679.1| putative radical SAM protein [Shewanella sp. ANA-3]
 gi|117613819|gb|ABK49273.1| conserved hypothetical radical SAM protein [Shewanella sp. ANA-3]
          Length = 309

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+   S  V + +   P  V  N       Y++ GV+
Sbjct: 89  YFQAYTSTYDEYQVLMAKYDEAVKD---SEIVGLCVGTRPDCVPDNVLDLLASYQQKGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+  +++L  + R H+ +     +  AR+   ++   LI  LP +T   +   
Sbjct: 146 VWLELGLQTANDRTLHKINRGHDFACYCDTVARARSRGLKVCTHLILGLPGETHLDYMAT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           LQ  L+  VD L L+ L + +G+   K  + G L L S
Sbjct: 206 LQAVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLPLLS 243


>gi|70998592|ref|XP_754018.1| histone acetyltransferase [Aspergillus fumigatus Af293]
 gi|66851654|gb|EAL91980.1| histone acetyltransferase, putative [Aspergillus fumigatus Af293]
 gi|159126248|gb|EDP51364.1| histone acetyltransferase, putative [Aspergillus fumigatus A1163]
          Length = 574

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 236 VGITIETRPDYCLDTHLSDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 295

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 296 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 355

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 356 RYKNYTPNALVDL 368


>gi|323307004|gb|EGA60288.1| Elp3p [Saccharomyces cerevisiae FostersO]
          Length = 557

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 220 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCET 279

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             ++++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 280 FAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 339

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     S N  VDL
Sbjct: 340 LWKTGRYKSYSANALVDL 357


>gi|257466298|ref|ZP_05630609.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917455|ref|ZP_07913695.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691330|gb|EFS28165.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 13/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS---FLTEMQWMRQLTGPRSISSIFFGGGTPSL- 83
           C   C +C+     ++   GQE  IQ         ++++ L         FFGG    L 
Sbjct: 15  CPNHCVFCN-----QKKINGQETDIQVEDIHRIVKEYLKTLPKKSEKEVAFFGGTFTGLS 69

Query: 84  IEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           +E Q   L      + +    +++ I +   P  ++ +  +  RK GV  I LG+QSL+E
Sbjct: 70  MELQREYL---EALQEYIERGDIQGIRLSTRPDYIQKDILEQLRKYGVKAIELGIQSLDE 126

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + LR   R +   + +++I   ++    +   ++  LP  ++ +    ++  ++Y  D  
Sbjct: 127 EVLRRSDRFYTEKQVLSSIQQMQSYGFEVGIQIMVGLPGSSLEKEIKTIKTLIAYQPDTA 186

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            +Y   + + T+  K +  G+
Sbjct: 187 RIYPTLVLEDTILEKQYHQGE 207


>gi|113971205|ref|YP_734998.1| putative radical SAM protein [Shewanella sp. MR-4]
 gi|113885889|gb|ABI39941.1| conserved hypothetical radical SAM protein [Shewanella sp. MR-4]
          Length = 309

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+   S  V + +   P  V  N       Y++ GV+
Sbjct: 89  YFQAYTSTYDEYQMLMAKYDEAVKD---SEIVGLCVGTRPDCVPDNVLDLLASYQQKGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+  + +L  + R H+ +     +  AR+   ++   LI  LP +T   +   
Sbjct: 146 VWLELGLQTANDSTLHKINRGHDFACYCDTVARARSRGVKVCTHLILGLPGETHLDYMAT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           LQ  L+  VD L L+ L + +G+   K  + G L L S
Sbjct: 206 LQAVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLPLLS 243


>gi|323352025|gb|EGA84564.1| Elp3p [Saccharomyces cerevisiae VL3]
          Length = 554

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 217 SLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCET 276

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             ++++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 277 FAVSKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYE 336

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     S N  VDL
Sbjct: 337 LWKTGRYKSYSANALVDL 354


>gi|332702004|ref|ZP_08422092.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552153|gb|EGJ49197.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 345

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/219 (19%), Positives = 91/219 (41%), Gaps = 11/219 (5%)

Query: 1   MKYLSAYENNMTGQGSNS---LGVYVHWPFCVKKCPYCD--FNSHVRRYKVGQENFIQSF 55
           M  L A+ +    +GS +   L V++    C  +C +C     + + R  + + +     
Sbjct: 1   MPRLIAFRHPRPRRGSATRRILPVFLPQHGCPGRCRFCSQRLQTGLDRKPLAEHH--AQL 58

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANP 114
             E+  + + TG + +   F+G    +L EP     +   +A ++     +  I     P
Sbjct: 59  AAELDRLYR-TGSQPLEIGFYGATFTALPEPWPERFV--ALAASYMKQGLIARIRCSTRP 115

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD 174
            + + +     R  G+  + +GVQ+ + ++L   GR H  +EA+A           +   
Sbjct: 116 DACDFSLLSRLRDLGLELVEIGVQTFDAEALARSGRGHGPAEALAGCRAVSEASLALGLH 175

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           L+  LP Q+   +  ++  A+S   + + L+   +  GT
Sbjct: 176 LMPGLPGQSGAAFLRDVDTAVSLEPESVRLHPCLVLAGT 214


>gi|207743769|ref|YP_002260161.1| hypothetical protein RSIPO_01951 [Ralstonia solanacearum IPO1609]
 gi|206595168|emb|CAQ62095.1| hypothetical protein RSIPO_01951 [Ralstonia solanacearum IPO1609]
          Length = 74

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/26 (61%), Positives = 21/26 (80%)

Query: 15 GSNSLGVYVHWPFCVKKCPYCDFNSH 40
           S  L +YVH P+CV++CPYCDF+SH
Sbjct: 41 ASPPLSLYVHVPWCVRQCPYCDFHSH 66


>gi|327401686|ref|YP_004342525.1| histone acetyltransferase, ELP3 family [Archaeoglobus veneficus
           SNP6]
 gi|327317194|gb|AEA47810.1| histone acetyltransferase, ELP3 family [Archaeoglobus veneficus
           SNP6]
          Length = 545

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 5/122 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P   +  +     + G  ++ LGVQS+ +  L  + R H+ ++ I A  L +
Sbjct: 214 VGLTIETRPDFSKREHILEMLRYGATKVELGVQSVYDDVLNLIRRGHSVADTIEATKLLK 273

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LP     + ++E+ + L    S+  D+L +Y   + +GT  Y+  K 
Sbjct: 274 DSAFKVGYHVMPGLPGSDFDR-DVEMFKELFSNESFKPDYLKIYPTLVVEGTELYEWWKA 332

Query: 222 GD 223
           G+
Sbjct: 333 GE 334


>gi|322787946|gb|EFZ13789.1| hypothetical protein SINV_05377 [Solenopsis invicta]
          Length = 454

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +
Sbjct: 203 STTKCIGITIETRPDYCLKKHLSDMLRYGCTRLEIGVQSIYEDVARDTNRGHTVRAVCES 262

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
             LA++   ++   ++  LP    ++ +TQ++ E  ++ ++  D L +Y   + +GT  Y
Sbjct: 263 FELAKDAGFKVIAHMMPNLPNVDLERDITQFK-EFFKSPAFRADGLKIYPTLVIRGTGLY 321

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G       +V VD 
Sbjct: 322 ELWKTGRYQSYPPSVLVDF 340


>gi|289193223|ref|YP_003459164.1| hypothetical protein MFS40622_1757 [Methanocaldococcus sp.
           FS406-22]
 gi|288939673|gb|ADC70428.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22]
          Length = 318

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 19/208 (9%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           I+F  GT +    + +  I D    + +    + ++I   P  +E   ++    Y + G 
Sbjct: 96  IYFYPGTNTYAPAEKLKEIWDF---SLSYEDVIGLSIGTRPDCLEKEKLDILAEYVERGY 152

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  I LG+QS+ +++L  L R HN S+ I AI        ++   +I  LP +T  +  +
Sbjct: 153 DIWIDLGIQSMHQKTLEILNRGHNVSDTIKAIKDCHKRGIKVCGHIILGLPGETWKEM-I 211

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL----------YNL 238
           E  + LS   ++ + +Y L + K T   +M+  G+     E   ++L          Y L
Sbjct: 212 ETAKILSLLDIEAVKIYPLVVVKDTKLEEMYWKGEYRTLDEKQYINLVCDFLEHLSPYVL 271

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHN 266
            Q ++        ++S   +LG   + N
Sbjct: 272 IQRVSKDKVPENIKVSPEWYLGRLKIMN 299


>gi|160874375|ref|YP_001553691.1| putative radical SAM protein [Shewanella baltica OS195]
 gi|160859897|gb|ABX48431.1| conserved hypothetical radical SAM protein [Shewanella baltica
           OS195]
 gi|315266610|gb|ADT93463.1| conserved hypothetical protein [Shewanella baltica OS678]
          Length = 309

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+  +   V + +   P  V  N       Y+  GV+
Sbjct: 89  YFQAYTSTYDEYQVLMAKYDEAVKDGEI---VGLCVGTRPDCVPDNVLDLLASYQANGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+ ++++LR + R H+       +  AR    ++   LI  LP +T + +   
Sbjct: 146 VWLELGLQTAKDETLRKINRGHDFGCYCDTVSRARARGLKVCTHLILGLPDETHSDYMAT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           L   L   VD L L+ L + +G+   K  + G L L S
Sbjct: 206 LAAVLQQGVDGLKLHPLHVVEGSTMAKAWRSGRLPLLS 243


>gi|218708511|ref|YP_002416132.1| putative Fe-S oxidoreductase [Vibrio splendidus LGP32]
 gi|218321530|emb|CAV17482.1| putative Fe-S oxidoreductase [Vibrio splendidus LGP32]
          Length = 317

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR +  ++   LI  LPK+T       L+
Sbjct: 144 LELGLQTANDKTLKRINRGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLE 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L+   D + L+ L I +G+   K  K G L  PS    +D+
Sbjct: 204 KVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEYIDI 246


>gi|167042593|gb|ABZ07316.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_ANIW133I6]
          Length = 526

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           T + NV  TIE  P   +  +       GV R+ +GVQSL E+  + + R HN ++ I +
Sbjct: 193 TKNRNVGFTIETKPDYCKKEHVDLMLSYGVTRVEIGVQSLHERVYKIVNRGHNYNDVIDS 252

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA---VDHLSLYQLTIEKGTLFY 216
             ++++   ++   ++  LP  T  +   + ++  + +    D L +Y   + K T  Y
Sbjct: 253 FQISKDSGYKIVAHMMPGLPTMTPNEDINDFKKLFNDSNLKPDMLKIYPSLVLKNTPLY 311


>gi|115438320|ref|XP_001218036.1| hypothetical protein ATEG_09414 [Aspergillus terreus NIH2624]
 gi|114188851|gb|EAU30551.1| hypothetical protein ATEG_09414 [Aspergillus terreus NIH2624]
          Length = 572

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 232 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 291

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 292 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 351

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 352 RYKNYTPNALIDL 364


>gi|59712730|ref|YP_205506.1| Fe-S oxidoreductase [Vibrio fischeri ES114]
 gi|59480831|gb|AAW86618.1| predicted Fe-S oxidoreductase [Vibrio fischeri ES114]
          Length = 313

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 4/134 (2%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V    ++  +GY   G    + LG+Q+  +++L+ + R H+ +   A  
Sbjct: 111 VGLCVGTRPDCVPDAVLDLLKGYVDDGYEVWLELGLQTANDKTLKRINRGHDFACYDAIT 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR++  ++   LI  LP  T       L + L+   D + L+ L I +G+   K  + 
Sbjct: 171 RKARSLGIKVCTHLIIGLPGDTRDDNRQTLDKVLATGTDGIKLHPLHIVEGSTLAKAWRA 230

Query: 222 GDLVLPSENVAVDL 235
           G L  P  +  VD+
Sbjct: 231 GKLDAPEMDEYVDI 244


>gi|146292240|ref|YP_001182664.1| putative radical SAM protein [Shewanella putrefaciens CN-32]
 gi|145563930|gb|ABP74865.1| conserved hypothetical radical SAM protein [Shewanella putrefaciens
           CN-32]
          Length = 309

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVN 131
           +F   T +  E Q +    D   K+  +   V + +   P  V  N       Y+  GV+
Sbjct: 89  YFQAYTSTYDEYQVLMAKYDEAVKDGEI---VGLCVGTRPDCVPDNVLDLLARYQADGVD 145

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+  +++LR + R H+ +     +  AR    ++   LI  LP +T + +   
Sbjct: 146 VWLELGLQTANDETLRRINRGHDFACYCDTVSRARARGLKVCTHLILGLPNETHSDYMAT 205

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           L   L   VD L L+ L I +G+   K  + G L L S
Sbjct: 206 LAAVLQQGVDGLKLHPLHIVEGSTMAKAWRSGRLPLLS 243


>gi|255715527|ref|XP_002554045.1| KLTH0E13068p [Lachancea thermotolerans]
 gi|238935427|emb|CAR23608.1| KLTH0E13068p [Lachancea thermotolerans]
          Length = 555

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQSL E   R   R H        
Sbjct: 218 SLTKCVGITIETRPDYCTHTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVKSVAET 277

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             +A++   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y+
Sbjct: 278 FCVAKDAGYKIVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYE 337

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     + N  VDL
Sbjct: 338 LWKTGRYKSYNANALVDL 355


>gi|222529152|ref|YP_002573034.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455999|gb|ACM60261.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 341

 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++    +  +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDEERLRLLKLYNVRTIELGIQSMFDHVLNASARGHTAQHSKNAMEMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +   ++  LPK T ++ ++E  + L S++ D   +Y   + +GT   KM++ G+   
Sbjct: 148 GFLLGVQVMVGLPKST-SEKDIETAKILTSFSPDIARIYPTLVIEGTYLAKMYQRGEYEP 206

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
            S N AV+  +  +SI    G++   +      G +    +NY
Sbjct: 207 LSLNEAVERCSQIKSIFIEKGVNVIRV------GLQPTEEINY 243


>gi|282165036|ref|YP_003357421.1| histone acetyltransferase Elp3 homolog [Methanocella paludicola
           SANAE]
 gi|282157350|dbj|BAI62438.1| histone acetyltransferase Elp3 homolog [Methanocella paludicola
           SANAE]
          Length = 531

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 84  IEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           ++P +   + D  A N   +  +V +T E  P      +       GV ++ LGVQS  +
Sbjct: 179 VDPVHTKYLEDAQAANEEAAVRDVAMTFETRPDWCRTAHIDRMLDMGVTKVELGVQSTYD 238

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAV 199
             L+ + R H  +++  A    R+   ++ F ++  LP     +     +   S   +  
Sbjct: 239 FILKRIERGHTVADSEEANRALRDSAIKVGFHMMPGLPGSGFDRDLRMFEAVFSDPRFCP 298

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSI 242
           D+L +Y   + +GT  Y M + G+     SE  A+ L  + + +
Sbjct: 299 DYLKIYPTLVTRGTRLYDMWERGEYTPYSSEEAALLLARMKERL 342


>gi|84995686|ref|XP_952565.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65302726|emb|CAI74833.1| hypothetical protein, conserved [Theileria annulata]
          Length = 876

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T+E  P  +     +  RK G  R+ LG+Q   +  L ++ R H   ++I AI+L +  
Sbjct: 415 LTLETRPDRINPTEIELLRKFGCTRVQLGIQHTNDSILEYVNRGHTTKDSIKAIYLLKEN 474

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             ++   ++  LP  +  + ++E+ + +       VD   +Y   +   +   K HK G 
Sbjct: 475 CFKVDIHIMPDLPSSS-PEEDLEMFKYILSSKDLQVDQWKIYPCEVTPFSEIEKWHKQGK 533

Query: 224 LV 225
            +
Sbjct: 534 YI 535


>gi|299144132|ref|ZP_07037212.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518617|gb|EFI42356.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 356

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/198 (20%), Positives = 80/198 (40%), Gaps = 5/198 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + ++V    C   C +C+ N           + ++S + E  ++       +I   F+
Sbjct: 5   NIIPIFVPHLGCPNDCVFCNQNKITASSTNITSDDVRSIIEE--YLSYFKDKNNIEVAFY 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GG   ++     I L L  +AK +  ++ + EI +   P  +++   +  +   V+ I L
Sbjct: 63  GGSFTAI--EICIQLELLSVAKEYKENNIIKEIRLSTRPDCIDIKRLEILKHYLVDTIEL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L    R H+      A+ L +     +    +  LP  ++       +  +
Sbjct: 121 GVQSLDEDVLNLSNRGHDDKCVYNAVKLIKKYGFNLGLQQMIGLPGDSLEASLYTTREFI 180

Query: 196 SYAVDHLSLYQLTIEKGT 213
               D + +Y   + K T
Sbjct: 181 KLNPDFVRIYPTLVIKDT 198


>gi|320159946|ref|YP_004173170.1| hypothetical protein ANT_05360 [Anaerolinea thermophila UNI-1]
 gi|319993799|dbj|BAJ62570.1| hypothetical protein ANT_05360 [Anaerolinea thermophila UNI-1]
          Length = 532

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV + IE  P  +        R+ GV ++ +GVQSL+++ L    R H A+EA+ A  L 
Sbjct: 204 NVGLVIETRPDEITPQELAWLRRLGVTKVQMGVQSLDDRILALNQRGHTAAEALQATALL 263

Query: 165 R 165
           R
Sbjct: 264 R 264


>gi|169852658|ref|XP_001833011.1| histone acetyltransferase [Coprinopsis cinerea okayama7#130]
 gi|116505805|gb|EAU88700.1| histone acetyltransferase [Coprinopsis cinerea okayama7#130]
          Length = 554

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H         H
Sbjct: 214 SKAIGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSECFH 273

Query: 163 LARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP    ++ + Q++   +   ++  D L LY   + +GT  Y++
Sbjct: 274 LAKDAGFKVVAHMMPDLPNVGIERDLEQFKEYFENP-AFRSDGLKLYPTLVIRGTGLYEL 332

Query: 219 HKDGDLVLPSENVAVDL 235
            + G     + NV VD+
Sbjct: 333 WRTGRYKNYTPNVLVDV 349


>gi|325188265|emb|CCA22804.1| elongator complex protein putative [Albugo laibachii Nc14]
          Length = 657

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+E  P  +     + +R  G  R+ LG+Q  ++  L  + R     +AI A+ L R+ 
Sbjct: 281 ITLETRPDCITPEEIRRFRWYGCTRVQLGIQHTDDGILTKINRGCTTEDAIKAMKLLRDC 340

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             +    L+  LP  T    EM+ Q       +     D   +Y   I   T+  K H  
Sbjct: 341 CYKTDIHLMPNLPGSTP---EMDRQMFDYVLNSSQLQADQWKIYPCEITPWTVIKKWHDS 397

Query: 222 GDLVLPSENVAVDL 235
           G  +  S+   ++L
Sbjct: 398 GSYIPYSDQDLIEL 411


>gi|145253765|ref|XP_001398395.1| elongator complex protein 3 [Aspergillus niger CBS 513.88]
 gi|134083967|emb|CAK43062.1| unnamed protein product [Aspergillus niger]
          Length = 575

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 235 VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 294

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 295 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 354

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 355 RYKNYTPNALIDL 367


>gi|288931241|ref|YP_003435301.1| histone acetyltransferase, ELP3 family [Ferroglobus placidus DSM
           10642]
 gi|288893489|gb|ADC65026.1| histone acetyltransferase, ELP3 family [Ferroglobus placidus DSM
           10642]
          Length = 524

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T E  P   +  +     + G  ++ LGVQS+ +  L  + R H   E + A  L R
Sbjct: 201 VGMTFETRPDYSKEEHIIEMLRYGGTKVELGVQSVYDDVLEKINRGHGVREVVEATKLLR 260

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LP  +  + ++++ + L     +  D+L +Y   + +GT  Y+M++ 
Sbjct: 261 DSAFKVGYHVMPGLPGSSF-ERDLKMFKILFQDEKFKPDYLKIYPTIVVRGTKLYEMYER 319

Query: 222 GD 223
           G+
Sbjct: 320 GE 321


>gi|73669262|ref|YP_305277.1| ELP3 family histone acetyltransferase [Methanosarcina barkeri str.
           Fusaro]
 gi|72396424|gb|AAZ70697.1| histone acetyltransferase, ELP3 family [Methanosarcina barkeri str.
           Fusaro]
          Length = 547

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P      +   + K G  ++ LGVQS+ +  L  + R H  +E + A  + 
Sbjct: 215 NVGITFETRPDWAGEKHVDEFLKLGGTKVELGVQSVYDFVLTRMQRGHGVAEIVRANQIL 274

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFYKM 218
           R+   ++ F ++  LP    +  E++L+          +  D+L +Y   + +GT   ++
Sbjct: 275 RDSAFKVGFHMMPHLPG---SDSELDLKGFKKLFEDPRFKPDYLKIYPTLVTEGTPLCRL 331

Query: 219 HKDGDLVLPSENVAVDL 235
            + GD    S+  A +L
Sbjct: 332 WEAGDYEALSDEEAAEL 348


>gi|303249424|ref|ZP_07335645.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489166|gb|EFL49137.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 364

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 14/208 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-----QWMRQLTGPRSISSIF 75
           V+V +  C  +C +C    H++     Q   +   L EM     +  R   GP  ++  F
Sbjct: 40  VFVTFQGCPGRCLFC--AQHLQSGHAPQP--LSRVLAEMAAGLEEAGRLGRGPYELA--F 93

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GG   +L +P  +   L+  A+         +     P +           AG++ + L
Sbjct: 94  YGGVFTALPDPWPM-RFLETAARFREAGLVTRVRCSTRPDACAPGLLARLAGAGLDMVEL 152

Query: 136 GVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+ ++  LR  GR H+A+    AA+ + R     +   L+  LP  T  +   +   A
Sbjct: 153 GAQTFDDAVLRAAGRGHDAASVRRAAVDVVRAGM-GLGVQLLPGLPGHTPRELARDAVEA 211

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            + A + + L+   +  GT    ++++G
Sbjct: 212 AALAPEVVRLHPCLVVDGTPLAGLYREG 239


>gi|86139126|ref|ZP_01057697.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
 gi|85824357|gb|EAQ44561.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
          Length = 343

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 88/216 (40%), Gaps = 18/216 (8%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           ++   E ++E +P+  +         AG+ R S+GVQ  +  + + +GR+ +       +
Sbjct: 15  LAPEAEFSVEIDPNEFDQARCDALVAAGLTRASIGVQGFDTTTQQAIGRSLSFDRVAGVV 74

Query: 162 HLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            + R    R ++ DL++ LP Q + Q     ++ LS + D ++LY       ++  +   
Sbjct: 75  KMLRGGGVRDLNADLLFGLPHQDLAQICQSTRQLLSLSPDRVALYGYK-HLPSMIRRQAM 133

Query: 221 DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-----AESLHNLN------Y 269
                LP     ++L+    +I    G     I N +  G     A    +L+      +
Sbjct: 134 IPSETLPKPEDRLELFQAASAICLEEGYEEIGIDNFARRGDGLTLARDQSDLDKCLKRGF 193

Query: 270 WRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
             Y D      IG+G  A SR   G  + A S  ++
Sbjct: 194 QGYSDDPAKVLIGLGASAISRFPQGYAQNAPSTARY 229


>gi|197335171|ref|YP_002156923.1| radical SAM protein, family [Vibrio fischeri MJ11]
 gi|197316661|gb|ACH66108.1| radical SAM protein, family [Vibrio fischeri MJ11]
          Length = 313

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 4/134 (2%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V    ++  +GY   G    + LG+Q+  +++L+ + R H+ +   A  
Sbjct: 111 VGLCVGTRPDCVPDAVLDLLKGYVDDGYEVWLELGLQTANDKTLKRINRGHDFACYDAIT 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR++  ++   LI  LP  T       L + L+   D + L+ L I +G+   K  + 
Sbjct: 171 RKARSLGIKVCTHLIIGLPGDTRDDNRQTLDKVLATGTDGIKLHPLHIVEGSTMAKAWRA 230

Query: 222 GDLVLPSENVAVDL 235
           G L  P  +  VD+
Sbjct: 231 GKLNAPEMDEYVDI 244


>gi|156843328|ref|XP_001644732.1| hypothetical protein Kpol_1024p28 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115381|gb|EDO16874.1| hypothetical protein Kpol_1024p28 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 559

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQS+ E   R   R H        
Sbjct: 222 SLTKCVGITIETRPDYCTPTHLDDMLKYGCTRLEIGVQSIYEDVARDTNRGHTVKAVCET 281

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYK 217
             +A++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y+
Sbjct: 282 FAVAKDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPEFRTDGLKIYPTLVIRGTGLYE 341

Query: 218 MHKDGDLVLPSENVAVDL 235
           + K G     + N  VDL
Sbjct: 342 LWKTGRYKSYNANALVDL 359


>gi|119181973|ref|XP_001242149.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 580

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 238 VGITIETRPDYCLDTHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 298 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 357

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 358 RYKNYTPNALIDI 370


>gi|50949614|emb|CAH10573.1| hypothetical protein [Homo sapiens]
          Length = 533

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 197 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 256

Query: 161 IHLARNI----FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++     +P M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 257 FHLAKDSGLKWWPIMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 315

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 316 ELWKSG 321


>gi|308535148|ref|YP_002136920.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|308052493|gb|ACH37124.2| LOW QUALITY PROTEIN: radical SAM domain iron-sulfur cluster-binding
           oxidoreductase [Geobacter bemidjiensis Bem]
          Length = 616

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +   LR +GR  +  + +    L         FDLIY LP  ++  +   L 
Sbjct: 282 LQIGLQSADPAVLRGVGRGFDRDDFVMRASLLNRTGAIFGFDLIYGLPGDSLKLFRSSLD 341

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ALS   +HL ++ L +  GT   +++   D  L  E++ V  Y +  + T      A E
Sbjct: 342 FALSLYPNHLDIFPLAVLPGT---RLNGKAD-ALGLEHLKVPPYTVLSTPT----FSAKE 393

Query: 253 ISNHSFLGA 261
           +   S L A
Sbjct: 394 LKEASALAA 402


>gi|150390512|ref|YP_001320561.1| radical SAM domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950374|gb|ABR48902.1| Radical SAM domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 347

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 28/217 (12%)

Query: 19  LGVYVHWPFCVKKCPYCD------FNSHVRRYKVGQENFIQSFL---TEMQWMRQLTGPR 69
           + +++    C   C +C+       +S V   K+  E  IQS+L   T  Q  R++    
Sbjct: 8   IPIFIPHEGCPNDCSFCNQKTIAGTSSQVNVEKI--ETIIQSYLKLYTNQQKQREIA--- 62

Query: 70  SISSIFFGG---GTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGY 125
                F+GG   G P  ++ Q +      +A N+     ++ I +   P  +     Q  
Sbjct: 63  -----FYGGSFTGLPMEVQKQYLT-----VAFNYKKKGLIDGIRLSTRPDYINEEILQQL 112

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           +  GV  I LGVQS  E+ L+   R H+  +   A+   R    ++   ++  L   T  
Sbjct: 113 KFYGVTIIELGVQSTNEEVLKMNKRGHSKDDVFKAVKSIRKYEFQLGLQMMIGLFGDTEQ 172

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + E   +  +S   D + +Y   + + T   + + +G
Sbjct: 173 RIEQTAKDLISLRPDFVRIYPTLVIRDTALERYYYEG 209


>gi|303318853|ref|XP_003069426.1| histone acetyltransferase, ELP3 family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109112|gb|EER27281.1| histone acetyltransferase, ELP3 family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034580|gb|EFW16524.1| histone acetyltransferase [Coccidioides posadasii str. Silveira]
          Length = 580

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 238 VGITIETRPDYCLDTHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q      ++  D L +Y   + +GT  Y++ + G
Sbjct: 298 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 357

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 358 RYKNYTPNALIDI 370


>gi|86147381|ref|ZP_01065694.1| hypothetical protein MED222_00962 [Vibrio sp. MED222]
 gi|85834809|gb|EAQ52954.1| hypothetical protein MED222_00962 [Vibrio sp. MED222]
          Length = 317

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR +  ++   LI  LPK+T       L 
Sbjct: 144 LELGLQTANDKTLKRINRGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLD 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L+   D + L+ L I +G+   K  K G L  PS    +D+
Sbjct: 204 KVLAAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEYIDI 246


>gi|319425540|gb|ADV53614.1| conserved hypothetical protein [Shewanella putrefaciens 200]
          Length = 309

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 106 VEITIEANPSSVEVNNFQ---GYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V  N       Y+  GV+  + LG+Q+  +++LR + R H+ +     +
Sbjct: 117 VGLCVGTRPDCVPDNVLDLLARYQADGVDVWLELGLQTANDETLRRINRGHDFACYCDTV 176

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR    ++   LI  LP +T   +   L   L   VD L L+ L I +G+   K  + 
Sbjct: 177 SRARARGLKVCTHLILGLPNETHCDYMATLAAVLQQGVDGLKLHPLHIVEGSTMAKAWRS 236

Query: 222 GDLVLPS 228
           G L L S
Sbjct: 237 GRLPLLS 243


>gi|50546679|ref|XP_500809.1| YALI0B12628p [Yarrowia lipolytica]
 gi|49646675|emb|CAG83060.1| YALI0B12628p [Yarrowia lipolytica]
          Length = 553

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA+
Sbjct: 220 VGITIETRPDYCTETHLSDMLRYGCTRLEIGVQSVYEDVARDSNRGHTVKAVCHTFALAK 279

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +   S   +  D L LY   + +GT  Y++ K G
Sbjct: 280 DAGYKVVSHMMPDLPNVGMERDLDQFREYFSSPDFRTDGLKLYPTLVIRGTGLYELWKTG 339

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 340 RYKSYNANALIDL 352


>gi|148262207|ref|YP_001228913.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146395707|gb|ABQ24340.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 625

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 42/89 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +    R +GR  N ++ +  + L  +      FDLIY LP  T+  +   L 
Sbjct: 285 LQIGLQSADPLIQRKVGRIFNPADFLDKVALLNDAGAVFGFDLIYGLPGDTLKGFAASLD 344

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            AL    +HL ++ L +  GT  +    D
Sbjct: 345 FALQLYPNHLDIFPLAVLPGTRLFCRASD 373


>gi|61403581|gb|AAH91787.1| Elp3 protein [Danio rerio]
          Length = 455

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R +       + HLA+
Sbjct: 124 VGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGYTVRAVCESFHLAK 183

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 184 DAGFKVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 243

Query: 223 DLVLPSENVAVDL 235
                S +  VDL
Sbjct: 244 RYKSYSPSALVDL 256


>gi|46202017|ref|ZP_00053952.2| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 415

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 83/219 (37%), Gaps = 49/219 (22%)

Query: 28  CVKKCPYCDFNS--------------------HVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           C K+C YC   S                     VR Y VG+ +F+   LT          
Sbjct: 118 CPKRCIYCSIQSVWSHKWRHHSADYVVRQIEHLVRDYGVGEIHFVDDNLT--------AN 169

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYR 126
           P++   IF      +LIE +        +   WT  +   I T++     V        +
Sbjct: 170 PKTAMEIF-----QTLIERK--------LDVKWTCPNGTAIWTLDEKLLDV-------MK 209

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            +G  R++ G+++  +++  ++ +N N   A A +  A  I        I+  P QT   
Sbjct: 210 TSGCYRLTFGIEAASKETQAYIRKNLNTERARAMLSYANKIGIWTVSTFIFGFPHQTKED 269

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            +  ++ A+S   D  + Y L     T  +++ K  DL+
Sbjct: 270 MQDSIRYAISSGTDFATFYSLMPFPKTELWEILKKEDLI 308


>gi|329764813|ref|ZP_08256406.1| ELP3 family histone acetyltransferase [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329138726|gb|EGG42969.1| ELP3 family histone acetyltransferase [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 528

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 15/134 (11%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV  TIE  P   +  +       G+ RI +GVQSL+E+  + + R H+ ++ + +  ++
Sbjct: 199 NVGFTIETKPDYCKQKHVDMMLDYGITRIEIGVQSLQERIYKIVNRGHDYNDVVESFQIS 258

Query: 165 RNIFPRMSFDLIYALPKQTMT-QWEMELQRAL----SYAVDHLSLY-QLTIEKGTLF--- 215
           ++   ++   ++  LP  TMT + ++E  + L    S   D L +Y  L IE   L+   
Sbjct: 259 KDAGYKIVAHMMPGLP--TMTPEGDIEDFKKLFEDTSLKPDMLKIYPSLVIENTPLYDEY 316

Query: 216 ----YKMHKDGDLV 225
               Y  + D D++
Sbjct: 317 KRKEYTPYSDEDMI 330


>gi|305664205|ref|YP_003860493.1| histone acetyltransferase, ELP3 family [Ignisphaera aggregans DSM
           17230]
 gi|304378774|gb|ADM28613.1| histone acetyltransferase, ELP3 family [Ignisphaera aggregans DSM
           17230]
          Length = 480

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P   +          G  ++ +GVQS+ +  L+++ R H   + I A  L +
Sbjct: 145 VGLTIETRPDWAKEKQIDFMLYLGATKVEIGVQSIYDDVLKYINRGHTVKDVIEATRLLK 204

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LPK    + ++ + R +     +  D L +Y   + +GT  Y++ + 
Sbjct: 205 DAGFKVVYHIMPRLPKSDRDR-DIAMIREIFENPDFRPDMLKIYPTLVIEGTKLYELWRQ 263

Query: 222 GDLVLPSENVAVDL 235
           G     ++  A++L
Sbjct: 264 GLYKPLTDEEAIEL 277


>gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 349

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 13/175 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISS 73
           N + +++    C   C +C+     +R   G    I +   E   ++++       ++  
Sbjct: 5   NIIPIFIPHYGCPNDCVFCN-----QRKITGMSTDISNSDVEDTILEYLSYFKRKDNVEV 59

Query: 74  IFFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            F+GG   ++ +E Q+  L    +A ++     V+ I +   P +++    +  +K GV+
Sbjct: 60  AFYGGSFTAIPLEEQSEFL---KVAHSYKEKGLVKYIRLSTRPDAIDDRILENLKKYGVD 116

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            I LGVQSL+ + L    R HNAS    A +L ++   ++    +  LP  T+ +
Sbjct: 117 IIELGVQSLDPEVLILSNRGHNASCVYEAANLIKSYGFKLGLQQMVGLPGDTLEK 171


>gi|330935956|ref|XP_003305194.1| hypothetical protein PTT_17968 [Pyrenophora teres f. teres 0-1]
 gi|311317896|gb|EFQ86708.1| hypothetical protein PTT_17968 [Pyrenophora teres f. teres 0-1]
          Length = 422

 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  S       LA+
Sbjct: 82  VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVSAVAKTFCLAK 141

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL------SYAVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L + +      S+  D L +Y   + +GT  Y++ 
Sbjct: 142 DAGFKVVSHMMPDLPNVGM---ERDLDQFVEYFSNPSFRTDGLKIYPTLVIRGTGLYELW 198

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 199 RTGRYKNYTPNALIDI 214


>gi|256810675|ref|YP_003128044.1| hypothetical protein Mefer_0726 [Methanocaldococcus fervens AG86]
 gi|256793875|gb|ACV24544.1| conserved hypothetical protein [Methanocaldococcus fervens AG86]
          Length = 327

 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 9/167 (5%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           I+F  GT +    + +  I D      +    + ++I   P  +E   ++  + Y + G 
Sbjct: 105 IYFYPGTNTYAPAEKLKEIWDFCL---SYEDVIGLSIGTRPDCLEKEKLDILKEYVENGY 161

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  I LG+QS+ +++L  L R HN S+ I AI        ++   +I  LP ++  +  M
Sbjct: 162 DIWIDLGIQSMHQKTLEILNRGHNVSDTINAIKECHKRGIKVCGHIILGLPGESWKEM-M 220

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           E  + LS   V+ + +Y L + K T   +M+  G+     E   V+L
Sbjct: 221 ETAKILSLLGVESVKIYPLVVIKNTKLEEMYWMGEYRTLDEKQYVNL 267


>gi|326916715|ref|XP_003204650.1| PREDICTED: elongator complex protein 3-like [Meleagris gallopavo]
          Length = 534

 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 198 SLTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 257

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++   ++   ++  LP    ++ + Q+ +E     ++  D + LY   + +GT  Y
Sbjct: 258 FHLAKDAGFKVVAHMMPDLPNMGLERDIDQF-VEFFENPAFRPDGMKLYPTLVIRGTGLY 316

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G       +  VDL
Sbjct: 317 ELWKTGRYKSYPPSTLVDL 335


>gi|296221669|ref|XP_002756850.1| PREDICTED: elongator complex protein 3 isoform 1 [Callithrix
           jacchus]
          Length = 547

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|170109599|ref|XP_001886006.1| histone acetyltransferase, GCN5 superfamily [Laccaria bicolor
           S238N-H82]
 gi|164638936|gb|EDR03210.1| histone acetyltransferase, GCN5 superfamily [Laccaria bicolor
           S238N-H82]
          Length = 556

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H
Sbjct: 214 SKAIGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFH 273

Query: 163 LARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP    ++ + Q++   +   ++  D L +Y   + +GT  Y++
Sbjct: 274 LAKDAGFKVVAHMMPDLPNVGVERDLEQFKEYFENP-AFRSDGLKIYPTLVIRGTGLYEL 332

Query: 219 HKDGDLVLPSENVAVDL 235
            + G     + NV VD+
Sbjct: 333 WRTGRYKNYTPNVLVDV 349


>gi|242212931|ref|XP_002472296.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728573|gb|EED82464.1| predicted protein [Postia placenta Mad-698-R]
          Length = 556

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H
Sbjct: 214 SKAIGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFH 273

Query: 163 LARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP    ++ + Q++   +   ++  D L +Y   + +GT  Y++
Sbjct: 274 LAKDAGFKVVAHMMPDLPNVGVERDLEQFKEYFENP-AFRSDGLKIYPTLVIRGTGLYEL 332

Query: 219 HKDGDLVLPSENVAVDL 235
            + G     + NV VD+
Sbjct: 333 WRTGRYKNYTPNVLVDV 349


>gi|78223519|ref|YP_385266.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78194774|gb|ABB32541.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 346

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 9/199 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +CD    +   + G    E  I +        R     R +   F+GG   SL 
Sbjct: 15  CPHQCVFCD-QERISGQRPGLPEPEEMIATIDRHAASGRG----RPLEVAFYGGTFTSLP 69

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              +   +L  +       S   + +   P +V+    +     GV  + LGVQS+++  
Sbjct: 70  R-SDQERLLAPLQPLMATGSVARVRLSTRPDAVDGETARFLASRGVATVELGVQSMDDAV 128

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L   GR H A+    A          +   L+  LP  T       L+R L+ +   + +
Sbjct: 129 LTAAGRGHGAAHVEQAFASLCGAGIDVGAQLMPGLPGDTADSTLESLERVLALSPAFMRI 188

Query: 205 YQLTIEKGTLFYKMHKDGD 223
           Y   + +GT   ++ + GD
Sbjct: 189 YPTLVVEGTRLAELWRSGD 207


>gi|149746240|ref|XP_001495637.1| PREDICTED: similar to Elongator complex protein 3 isoform 1 [Equus
           caballus]
          Length = 547

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|302392425|ref|YP_003828245.1| radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302204502|gb|ADL13180.1| Radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 341

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 93/248 (37%), Gaps = 28/248 (11%)

Query: 19  LGVYVHWPFCVKKCPYCD------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           + ++V    C   C +C+      F   +   K  +   I+ +L+ M           I 
Sbjct: 8   IPIFVPHQGCPHDCVFCNQREITGFQEDMTPKKAAR--IIEEYLSTMNKENS-----KIE 60

Query: 73  SIFFGGGTPSL-IEPQNIALIL------DGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
             F+GG    L I+ Q   L +      +GI  N  +S+         P  ++       
Sbjct: 61  IAFYGGSFTGLEIKEQTQLLEVAYKYCQEGIVDNLRLSTR--------PDYIDREILNNL 112

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            K  V  I LGVQSL ++ L+   R H   +   A  L +     +   L+  LPK T  
Sbjct: 113 AKYNVQIIELGVQSLADKVLQASCRGHTPEDVFKASRLIKKFGFELGIQLMPGLPKSTQE 172

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                +Q+A+    D + +Y   +  GT   + + +G+    +   AV++      +  +
Sbjct: 173 SMFYSVQQAIGLTPDLVRIYPTLVIGGTKLAESYSEGEFTPLTLQEAVEICKEELKLFRS 232

Query: 246 HGLHAYEI 253
            G+    I
Sbjct: 233 RGIPVVRI 240


>gi|302691946|ref|XP_003035652.1| hypothetical protein SCHCODRAFT_13958 [Schizophyllum commune H4-8]
 gi|300109348|gb|EFJ00750.1| hypothetical protein SCHCODRAFT_13958 [Schizophyllum commune H4-8]
          Length = 554

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H
Sbjct: 214 SKAIGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFH 273

Query: 163 LARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP    ++ + Q++   +   ++  D L +Y   + +GT  Y++
Sbjct: 274 LAKDAGFKVVAHMMPDLPNVGVERDLEQFKEYFENP-AFRSDGLKIYPTLVIRGTGLYEL 332

Query: 219 HKDGDLVLPSENVAVDL 235
            + G     + NV VD+
Sbjct: 333 WRTGRYKNYTPNVLVDV 349


>gi|111226312|ref|XP_001134514.1| elongation protein 3 [Dictyostelium discoideum AX4]
 gi|122070582|sp|Q1ZXC6|ELP3_DICDI RecName: Full=Probable elongator complex protein 3
 gi|90970474|gb|EAS66831.1| elongation protein 3 [Dictyostelium discoideum AX4]
          Length = 559

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 97  AKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
           A  ++  SNV+   ITIE  P      +       G  R+ +GVQS+ E   R   R H 
Sbjct: 216 AVKYSEQSNVKCVGITIETRPDHCLKLHLSNMLTYGCTRLEIGVQSVFEDIARDTNRGHT 275

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIE 210
               + +  LA++   ++   ++  LP   M +     ME     ++  D L +Y   + 
Sbjct: 276 VRAVLESFQLAKDSGFKVVAHMMPDLPNMGMERDIYGFMEFFENPAFRADGLKIYPTLVI 335

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDL 235
           +GT  Y++ K G     S +  VDL
Sbjct: 336 RGTGLYELWKTGTYKNYSPDSLVDL 360


>gi|204931169|ref|ZP_03221963.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204319936|gb|EDZ05142.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 309

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD L L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGLKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|290968971|ref|ZP_06560506.1| radical SAM protein, TIGR01212 family [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780927|gb|EFD93520.1| radical SAM protein, TIGR01212 family [Megasphaera genomosp. type_1
           str. 28L]
          Length = 358

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 19/141 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTP--- 81
           C  +C +C+      +++V    F++   T  Q+M+  T  R     F+GG     P   
Sbjct: 15  CPYRCVFCNQWKITGQHRVPTATFVKE--TIQQYMQAATLSRHWEVAFYGGSFTAVPTAL 72

Query: 82  --SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             SL+EP   AL    I           I     P +V  +  +   + GVN + LGVQS
Sbjct: 73  QESLLEPATQALRQGKIHG---------IRCSTRPDAVGKDVIERLLRFGVNTVELGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAA 160
           +++  L+   R H A++ + A
Sbjct: 124 MDDTVLQRAKRGHTAADVVQA 144


>gi|149030304|gb|EDL85360.1| rCG52086, isoform CRA_b [Rattus norvegicus]
          Length = 525

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|194380640|dbj|BAG58473.1| unnamed protein product [Homo sapiens]
          Length = 455

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 119 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 178

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 179 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 237

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 238 ELWKSG 243


>gi|170586260|ref|XP_001897897.1| RE35395p [Brugia malayi]
 gi|158594292|gb|EDP32876.1| RE35395p, putative [Brugia malayi]
          Length = 533

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 203 IGITIETRPDYCLPKHLDEMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCECFEIAK 262

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           N   ++   ++  LP    ++ M Q+ +EL     +  D L LY   + +GT  Y++ + 
Sbjct: 263 NAGYKVVIHMMPNLPNVGIERDMEQF-IELFENPEFRPDGLKLYPTLVIRGTGLYELWRT 321

Query: 222 GDLVLPSENVAVDL 235
           G        + VDL
Sbjct: 322 GRYKSYPPEILVDL 335


>gi|120599824|ref|YP_964398.1| putative radical SAM protein [Shewanella sp. W3-18-1]
 gi|120559917|gb|ABM25844.1| conserved hypothetical radical SAM protein [Shewanella sp. W3-18-1]
          Length = 309

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 106 VEITIEANPSSVEVNNFQ---GYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V  N       Y+  GV+  + LG+Q+  +++LR + R H+ +     +
Sbjct: 117 VGLCVGTRPDCVPDNVLDLLARYQADGVDVWLELGLQTANDETLRRINRGHDFACYCDTV 176

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR    ++   LI  LP +T   +   L   L   VD L L+ L I +G+   K  + 
Sbjct: 177 SRARARGLKVCTHLILGLPNETHGDYMATLAAVLQQGVDGLKLHPLHIVEGSTMAKAWRS 236

Query: 222 GDLVLPS 228
           G L L S
Sbjct: 237 GRLPLLS 243


>gi|149746246|ref|XP_001495677.1| PREDICTED: similar to Elongator complex protein 3 isoform 2 [Equus
           caballus]
          Length = 499

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|293342160|ref|XP_002725159.1| PREDICTED: rCG52086-like [Rattus norvegicus]
 gi|293353904|ref|XP_002728336.1| PREDICTED: rCG52086-like [Rattus norvegicus]
 gi|149030303|gb|EDL85359.1| rCG52086, isoform CRA_a [Rattus norvegicus]
          Length = 547

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|296221671|ref|XP_002756851.1| PREDICTED: elongator complex protein 3 isoform 2 [Callithrix
           jacchus]
          Length = 503

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+ +E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-IEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|260948524|ref|XP_002618559.1| hypothetical protein CLUG_02018 [Clavispora lusitaniae ATCC 42720]
 gi|238848431|gb|EEQ37895.1| hypothetical protein CLUG_02018 [Clavispora lusitaniae ATCC 42720]
          Length = 542

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 212 VGITIETRPDYCTETHLSDMLTYGCTRLEVGVQSVYEDVARDTNRGHTVKAVCETFAVAK 271

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +LQ+ + Y        D L +Y   + +GT  Y++ 
Sbjct: 272 DAGYKVVSHMMPDLPNVGM---ERDLQQFVEYFENPEFRTDGLKIYPTLVIRGTGLYELW 328

Query: 220 KDGDLVLPSENVAVDL 235
           K G     S N  VDL
Sbjct: 329 KRGLYKSYSANALVDL 344


>gi|77919005|ref|YP_356820.1| radical SAM protein histone acetyltransferase [Pelobacter
           carbinolicus DSM 2380]
 gi|77545088|gb|ABA88650.1| radical SAM protein, putative histone acetyltransferase [Pelobacter
           carbinolicus DSM 2380]
          Length = 345

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 51/128 (39%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + I   P +   +        GV  + LG QS   + L    R H    A  A+ L R+ 
Sbjct: 87  VRISTRPDACGFDVVARLAALGVTTVELGCQSFSARVLEKAARGHGPQAARDAVGLLRDA 146

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
             R+   L+  LP  ++ +    L  AL    D L +Y   +  GT    + + G+ +  
Sbjct: 147 GIRIGLQLMPGLPGGSLEEARYSLACALDLRPDFLRIYPTVVIAGTDLEILWRQGEYIPW 206

Query: 228 SENVAVDL 235
           +   AV+L
Sbjct: 207 TLEEAVEL 214


>gi|226329850|ref|ZP_03805368.1| hypothetical protein PROPEN_03762 [Proteus penneri ATCC 35198]
 gi|225200645|gb|EEG82999.1| hypothetical protein PROPEN_03762 [Proteus penneri ATCC 35198]
          Length = 297

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 4/123 (3%)

Query: 106 VEITIEANPSSVEV---NNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V +   +  QGYR  G    + LG+Q+  +++L+++ R H+     A  
Sbjct: 111 VGLCVGTRPDCVPISVLDLLQGYRDQGYEVWLELGLQTAHDKTLKYINRGHDFQCYQATT 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR    ++   LI  LP++        L+R +    D L L+ L I +G+   K  K 
Sbjct: 171 REARQRGLKVCTHLIVGLPREDHLLNMQTLERVVETGTDGLKLHPLHIVEGSTIAKAWKA 230

Query: 222 GDL 224
           G +
Sbjct: 231 GRI 233


>gi|321478289|gb|EFX89246.1| hypothetical protein DAPPUDRAFT_303123 [Daphnia pulex]
          Length = 547

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +     K G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCLKRHQSDMLKYGCTRLEIGVQSVYEDIARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HL ++    I   M  DL     ++ + Q+ +E      +  D L +Y   + +GT  Y
Sbjct: 271 FHLGKDSGFKIVSHMMPDLPNIGLERDIDQF-IEFFENPLFRADGLKIYPTLVIRGTGLY 329

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G       NV VDL
Sbjct: 330 ELWKTGRYRSYHPNVLVDL 348


>gi|15922501|ref|NP_378170.1| molybdenum cofactor biosynthesis protein A [Sulfolobus tokodaii
           str. 7]
 gi|15623291|dbj|BAB67279.1| 323aa long hypothetical molybdenum cofactor biosynthesis protein A
           [Sulfolobus tokodaii str. 7]
          Length = 323

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 27/168 (16%)

Query: 11  MTGQGSNSLGVYVHWPF--CVKKCPYCDFN------SHVRRYKVGQENFIQSFLTEMQWM 62
           +  +G+N L V    PF  C   C +C  +      S V  Y V  ++ I        W+
Sbjct: 20  IIDRGTNVLQVR---PFSNCPMSCIFCSVDAGPNSRSRVTEYIVDADHLIN-------WV 69

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +   +   +S +  G G P ++ P +I  I+ GI +N  V    E+ IE +   +   
Sbjct: 70  NYVVDRKIHQVSILIDGVGEP-ILHP-DIVKIVKGIKENRKV---FEVAIETHGLPLNER 124

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLG--RNHNASEAIAAIHLARN 166
             +G   AG++RI+L + SL+E   ++L   + +N S+ +  I LA N
Sbjct: 125 LIKGLANAGLDRINLSLDSLDENKAKYLSGHKGYNVSKILKMIDLALN 172


>gi|194390026|dbj|BAG60529.1| unnamed protein product [Homo sapiens]
          Length = 455

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 119 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 178

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 179 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 237

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 238 ELWKSG 243


>gi|167622996|ref|YP_001673290.1| putative radical SAM protein [Shewanella halifaxensis HAW-EB4]
 gi|167353018|gb|ABZ75631.1| conserved hypothetical radical SAM protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 313

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 11/199 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    +K   E  IQ  L   Q   +L+   S    +F   T +  E   +  
Sbjct: 45  CTYCNVASFSHEHKT--ELSIQEQLA--QGRERLSTKSSKYIAYFQAYTSTYDEYLVLKQ 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVNR-ISLGVQSLEEQSLRF 147
             D   ++   S  V + +   P  V     +   GY+  GV+  + LG+QS  +++L+ 
Sbjct: 101 KYDEAIQD---SDIVGLCVGTRPDCVPDEVLELLVGYQNDGVDVWLELGLQSANDRTLKK 157

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +     +  AR +  ++   LI  LP +    +   L + L+  VD L L+ L
Sbjct: 158 INRGHDFAAYEDTVKRARRLGIKVCTHLILGLPGEGHEDYLETLDKVLAVGVDGLKLHPL 217

Query: 208 TIEKGTLFYKMHKDGDLVL 226
            I +G+   K  ++  + L
Sbjct: 218 HIVEGSTMAKAWRNNKMSL 236


>gi|194041549|ref|XP_001928660.1| PREDICTED: elongator complex protein 3-like [Sus scrofa]
          Length = 547

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCVGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|322418141|ref|YP_004197364.1| cobalamin B12-binding domain-containing protein [Geobacter sp. M18]
 gi|320124528|gb|ADW12088.1| cobalamin B12-binding domain protein [Geobacter sp. M18]
          Length = 474

 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 6/90 (6%)

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYA 178
           F  YRKAGV  +SLG++S + Q L  LG+      A EA+  IH   +I    SF  I  
Sbjct: 293 FWKYRKAGVVHVSLGIESADRQLLERLGKGMQPDVAKEALEIIH-RHDIVSEASF--ILG 349

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            P +T    +  L+ A  Y  D+ + + LT
Sbjct: 350 FPDETPATVQATLKMAQQYNPDNANFFALT 379


>gi|67523677|ref|XP_659898.1| hypothetical protein AN2294.2 [Aspergillus nidulans FGSC A4]
 gi|40745249|gb|EAA64405.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259487688|tpe|CBF86551.1| TPA: histone acetyltransferase, putative (AFU_orthologue;
           AFUA_5G06140) [Aspergillus nidulans FGSC A4]
          Length = 574

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 234 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 293

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+E   +   ++  D L +Y   + +GT  Y++ + 
Sbjct: 294 DAGFKVVSHMMPDLPNVGMERDLFQFEEYFENP-AFRTDGLKIYPTLVIRGTGLYELWRT 352

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +DL
Sbjct: 353 GRYKNYTPNALIDL 366


>gi|168819601|ref|ZP_02831601.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205343489|gb|EDZ30253.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320087775|emb|CBY97539.1| Elongator complex protein 3 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 309

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 8/143 (5%)

Query: 101 TVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASE 156
           +++S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ + 
Sbjct: 106 SLASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFAC 165

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
                 +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   
Sbjct: 166 YQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMA 225

Query: 217 KMHKDGDLVLPSENVAVDLYNLT 239
           K  + G L      + +D Y LT
Sbjct: 226 KAWEAGRL----NGIELDDYTLT 244


>gi|224585126|ref|YP_002638925.1| hypothetical protein SPC_3399 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469654|gb|ACN47484.1| hypothetical protein SPC_3399 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 309

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P+ V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPNCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDETLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +  ++    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQSECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|189426217|ref|YP_001953394.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422476|gb|ACD96874.1| conserved hypothetical radical SAM protein [Geobacter lovleyi SZ]
          Length = 311

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 54/103 (52%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++ +Q+L+ + R H+ +  + A++  +    R+   LI  LP ++  Q    ++
Sbjct: 144 LELGMQTMHDQTLQAINRGHDHACFVEAVNRCKQKKLRICAHLILGLPGESREQMLASVE 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
                 VD + L+ L + KG+   + ++ GDL L + +  V L
Sbjct: 204 ELNRLGVDGVKLHHLHVLKGSQLEQEYRTGDLPLMTRDEYVAL 246


>gi|73993905|ref|XP_534563.2| PREDICTED: similar to elongation protein 3 homolog [Canis
           familiaris]
          Length = 597

 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 261 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 320

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 321 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 379

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 380 ELWKSG 385


>gi|256544904|ref|ZP_05472275.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
 gi|256399403|gb|EEU13009.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
          Length = 358

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 8/206 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + +++ +  C   C +C+    +  YK  + +EN I+     + +  +    + I+  FF
Sbjct: 8   IPIFIPFLGCPHDCAFCN-QVKITNYKDNINKENTIRQINQYLSYFPKNENLKEIA--FF 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GG    L E   I+ +   IA N+     ++ I +   P  +  +     +K  V+ I L
Sbjct: 65  GGSFTGLDEKVMISYL--EIALNYKKKGIIDRIRLSTRPDYINNSILDILKKYEVDVIEL 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL+ + L    R H+  ++I A  L ++   ++   ++  L K +  +       ++
Sbjct: 123 GIQSLDNEILNANERGHSKEDSIRASKLIKDYGFKLGHQIMPGLYKDSFDKAIKTGLESI 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               D + +Y   + K T   K++K+
Sbjct: 183 KMNPDMVRIYPTLVIKDTKLEKLYKE 208


>gi|194383120|dbj|BAG59116.1| unnamed protein product [Homo sapiens]
 gi|221045494|dbj|BAH14424.1| unnamed protein product [Homo sapiens]
          Length = 475

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 139 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 198

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 199 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 257

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 258 ELWKSG 263


>gi|32265988|ref|NP_860020.1| hypothetical protein HH0489 [Helicobacter hepaticus ATCC 51449]
 gi|32262037|gb|AAP77086.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 320

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+ + +L    R H+ + A       R    ++   LIY LP++T       L+
Sbjct: 165 LEYGIQSVYDNTLTITNRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMMLYSLE 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             L + +D + ++ L +  GT   K++KDG
Sbjct: 225 SVLEWGIDGIKIHPLYVVNGTRLAKLYKDG 254


>gi|296133568|ref|YP_003640815.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296032146|gb|ADG82914.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 362

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 49/115 (42%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++ +        GV+ I LGVQS+++  L F  R H     + A  L ++ 
Sbjct: 98  IRISTRPDKIDEDTLSILMAYGVDTIELGVQSMDKDVLAFARRGHATEHVVKAAKLVKSW 157

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
              +   ++  LP  +  +        +  + D + +Y + + KGT   ++ + G
Sbjct: 158 GFFLGVQIMIGLPGDSQEKALKTCNEVIDLSPDFVRIYPVLVLKGTELERLFRQG 212


>gi|189426041|ref|YP_001953218.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422300|gb|ACD96698.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 622

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +      +GR  N  E  A + L  +      FDLIY LP   + ++   L 
Sbjct: 285 VQIGLQSADPAVAGGVGRTFNRDEFTAKVMLLNDSGATFGFDLIYGLPDDCLDKFREGLN 344

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
            ALS   +HL ++ L +  GT
Sbjct: 345 FALSLYPNHLDIFPLAVLPGT 365


>gi|119773995|ref|YP_926735.1| hypothetical protein Sama_0858 [Shewanella amazonensis SB2B]
 gi|119766495|gb|ABL99065.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 317

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 15/201 (7%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEPQ 87
           +  C +C    HV  +        Q F    Q  RQ+ G   ++  I+F   T +  E  
Sbjct: 50  IGGCTFC----HVPSFNADDG---QQFDIPSQLKRQMAGRTDALYFIYFQAYTSTYDE-- 100

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQ 143
            +A++     +  ++ +   + +   P  V    ++    Y++ G++  + LG+Q+  + 
Sbjct: 101 -VAVLKRRYDEALSIGNVAGLFVGTRPDCVPDAVLHLLADYQQQGIDVWLDLGLQTARDD 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + R H+ +    A+  AR +  ++   LI  LP +T   +    ++ L+  VD L 
Sbjct: 160 TLKRINRGHDFAIYADAVTRARRLGIKVCTHLILGLPGETSEDFVESHRQVLALGVDGLK 219

Query: 204 LYQLTIEKGTLFYKMHKDGDL 224
           L+ L I +G++  +  + G L
Sbjct: 220 LHPLHIVEGSIMARQWRAGRL 240


>gi|150863958|ref|XP_001382617.2| hypothetical protein PICST_42410 [Scheffersomyces stipitis CBS
           6054]
 gi|149385214|gb|ABN64588.2| ELongator protein [Scheffersomyces stipitis CBS 6054]
          Length = 558

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 222 VGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAK 281

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 282 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELW 338

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 339 KKGLYKSYNANALIDL 354


>gi|62181837|ref|YP_218254.1| hypothetical protein SC3267 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197261752|ref|ZP_03161826.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|62129470|gb|AAX67173.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197240007|gb|EDY22627.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|322716326|gb|EFZ07897.1| Elongator protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 309

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDETLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +  ++    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQSECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|157362927|ref|YP_001469694.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
 gi|157313531|gb|ABV32630.1| Radical SAM domain protein [Thermotoga lettingae TMO]
          Length = 343

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 26/249 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT----PSL 83
           C K+C +CD     +R   G    + S     + + +   P     I F GGT    P L
Sbjct: 13  CKKRCLFCD-----QRSATGFSQ-LPSIEELNKMINKYIAPDERFEIAFYGGTFTALPVL 66

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++ + +A   + I KN        I I   P  +   N    +K GV  + LG QS  + 
Sbjct: 67  LQKRYLAWADEYIRKNVCDG----IRISTRPDEINKENLIFLKKNGVKFVELGAQSFCDD 122

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP-----KQTMTQWEMELQRALSYA 198
            L    RNH++ +   A  L + +       L+  LP     K   + W     + +   
Sbjct: 123 VLHESERNHSSKDIEKACTLLKELKIDFGLHLMIGLPGDEKWKDLFSSW-----KTVENG 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
                L+   + KG     ++ DG       + A+D+ +   +I  ++ +    I    F
Sbjct: 178 AKTCRLHPTIVLKGAPLESLYLDGRYRAVRLDEAIDICSDMMAILESNNVKVIRIG--LF 235

Query: 259 LGAESLHNL 267
           +  E + N+
Sbjct: 236 VPDELMKNI 244


>gi|218886657|ref|YP_002435978.1| radical SAM protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757611|gb|ACL08510.1| Radical SAM domain protein [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 401

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 9/169 (5%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNR 132
           I F GGT +L+     A  L+ +A  W     V  +     P +V  +     R AG++ 
Sbjct: 125 IAFYGGTFTLLSEAERAACLE-LAARWRQRGVVCRVRCSTRPDAVTEHGLTTLRAAGMDC 183

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LGVQS ++ +L    R +  + A AA  +       +   L+  +P  T   +  +++
Sbjct: 184 VELGVQSFDDAALVAASRGYGGALARAACAMVAGAGLELGVQLMPGMPGVTPEVFRTDVR 243

Query: 193 RALSYAVD-------HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            AL    D        L  Y   + +GT   +  + G  V  S +  VD
Sbjct: 244 TALLPDTDGAAPLTSFLRFYPCLVLRGTPLAERWRAGSYVTWSLDTTVD 292


>gi|190344747|gb|EDK36490.2| hypothetical protein PGUG_00588 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 389

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 227 VGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAK 286

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 287 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYELW 343

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 344 KKGLYKSYNANALIDL 359


>gi|78224132|ref|YP_385879.1| hypothetical protein Gmet_2936 [Geobacter metallireducens GS-15]
 gi|78195387|gb|ABB33154.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 319

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 45/93 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+QS++++ L+ +GR H  +E + A+         +   LIY  P +T   +     
Sbjct: 150 IELGLQSMDDKILQQIGRGHTLTEYLEAVARIEGRGIELCTHLIYGFPGETRDGFLRTAD 209

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                 V+ + ++QL   KGT   +++  GD V
Sbjct: 210 MMAGLPVNSVKIHQLHAVKGTRLAELYHQGDFV 242


>gi|256086957|ref|XP_002579648.1| histone acetyltransferase-related [Schistosoma mansoni]
 gi|238665116|emb|CAZ35887.1| histone acetyltransferase-related [Schistosoma mansoni]
          Length = 563

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + HL++
Sbjct: 217 VGITIETRPDYCLKKHLSEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLSK 276

Query: 166 NIFPRMSFDLI-YALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKM 218
           +      F ++ + +P      WE +L +   Y        D L +Y   + +GT  Y++
Sbjct: 277 D----AGFKVVSHMMPDLPNVGWERDLAQFAEYFENPAFRSDGLKIYPTLVIRGTGLYEL 332

Query: 219 HKDG 222
            + G
Sbjct: 333 WRTG 336


>gi|194378696|dbj|BAG63513.1| unnamed protein product [Homo sapiens]
          Length = 418

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 82  SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 141

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 142 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 200

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 201 ELWKSG 206


>gi|254572788|ref|XP_002493503.1| Subunit of Elongator complex, which is required for modification of
           wobble nucleosides in tRNA [Pichia pastoris GS115]
 gi|238033302|emb|CAY71324.1| Subunit of Elongator complex, which is required for modification of
           wobble nucleosides in tRNA [Pichia pastoris GS115]
 gi|328354672|emb|CCA41069.1| elongator complex protein 3 [Pichia pastoris CBS 7435]
          Length = 556

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  V ITIE  P      +     K G  R+ +GVQS+ E   R   R H        
Sbjct: 217 SLTKCVGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCET 276

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
              +++   ++   ++  LP    ++ + Q++ E   + ++  D L LY   + +GT  Y
Sbjct: 277 FGYSKDAGYKVVSHMMPDLPNVGMERDLEQFK-EYFESPAFRTDGLKLYPTLVIRGTGLY 335

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G     + N  +DL
Sbjct: 336 ELWKTGRYRSYNANALIDL 354


>gi|146422549|ref|XP_001487211.1| hypothetical protein PGUG_00588 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 389

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 227 VGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAK 286

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 287 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYELW 343

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 344 KKGLYKSYNANALIDL 359


>gi|148979752|ref|ZP_01815689.1| hypothetical protein VSWAT3_08306 [Vibrionales bacterium SWAT-3]
 gi|145961635|gb|EDK26934.1| hypothetical protein VSWAT3_08306 [Vibrionales bacterium SWAT-3]
          Length = 317

 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 2/123 (1%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV +    GY + G    + LG+Q+    +L+ + R H+ +        AR +  ++ 
Sbjct: 125 PDSV-LELLAGYVEKGYEIWLELGLQTANNSTLKRINRGHDFAVYETITQRARALGIKVC 183

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI  LPK+T       L + L+   D + L+ L I +G+   K  K G L  PS    
Sbjct: 184 THLIVGLPKETKADNLETLDKVLAVGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEY 243

Query: 233 VDL 235
           +D+
Sbjct: 244 IDI 246


>gi|332247635|ref|XP_003272965.1| PREDICTED: elongator complex protein 3 [Nomascus leucogenys]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|255726068|ref|XP_002547960.1| hypothetical protein CTRG_02257 [Candida tropicalis MYA-3404]
 gi|240133884|gb|EER33439.1| hypothetical protein CTRG_02257 [Candida tropicalis MYA-3404]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 215 VGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKSVCETFAVAK 274

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 275 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELW 331

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 332 KQGLYKSYNANALIDL 347


>gi|257053991|ref|YP_003131824.1| histone acetyltransferase, ELP3 family [Halorhabdus utahensis DSM
           12940]
 gi|256692754|gb|ACV13091.1| histone acetyltransferase, ELP3 family [Halorhabdus utahensis DSM
           12940]
          Length = 554

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 8/177 (4%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNV 106
           QE F++  L  M        P+   +  F     +     +   + D IA N T S  NV
Sbjct: 172 QEWFVKRALQAMNEYDPDCDPQPSETESFAQDPDAY----DFRYLEDVIADNETGSIRNV 227

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
             T E  P            + G  ++ +GVQ+  E   R + R H    +I A    R+
Sbjct: 228 ATTFETKPDWCGPEQVDRMLRLGGTKVEVGVQTTYESINREMHRGHGVDASIEANRRLRD 287

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHK 220
              ++ F ++   P  T      + +R      +  D+L +Y   +  GT+ Y MH+
Sbjct: 288 AGFKVGFHMMPGQPGMTEEMVREDFRRLFEQPEWRPDYLKIYPTLVVGGTVTYDMHR 344


>gi|114619479|ref|XP_001165532.1| PREDICTED: elongator complex protein 3 isoform 5 [Pan troglodytes]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|301757212|ref|XP_002914456.1| PREDICTED: elongator complex protein 3-like [Ailuropoda
           melanoleuca]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|48478418|ref|YP_024124.1| radical SAM superfamily protein [Picrophilus torridus DSM 9790]
 gi|48431066|gb|AAT43931.1| radical SAM Superfamily protein [Picrophilus torridus DSM 9790]
          Length = 531

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P      +     + G  ++ LGVQ L ++ L    R H  +E I +  LAR
Sbjct: 205 IGLTVETKPDWFMEGDIDLALEYGTTKVELGVQILNDRILNINNRGHGLAEIIRSTRLAR 264

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  +   + +          S   Y  D L +Y   + +GT  YK+ K G
Sbjct: 265 DAGLKIVYHIMPGMYGSSYSDDVKSFDEMFSNSDYMPDMLKIYPTLVVRGTSLYKLWKSG 324

Query: 223 DLVLPSENVAVDL 235
             V      AV+L
Sbjct: 325 KYVPYDTERAVNL 337


>gi|194373669|dbj|BAG56930.1| unnamed protein product [Homo sapiens]
 gi|221045358|dbj|BAH14356.1| unnamed protein product [Homo sapiens]
          Length = 428

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 92  SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 151

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 152 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 210

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 211 ELWKSG 216


>gi|297682569|ref|XP_002818990.1| PREDICTED: elongator complex protein 3-like [Pongo abelii]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|7022443|dbj|BAA91600.1| unnamed protein product [Homo sapiens]
          Length = 499

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|23510283|ref|NP_060561.3| elongator complex protein 3 [Homo sapiens]
 gi|145558902|sp|Q9H9T3|ELP3_HUMAN RecName: Full=Elongator complex protein 3; Short=hELP3
 gi|12654795|gb|AAH01240.1| Elongation protein 3 homolog (S. cerevisiae) [Homo sapiens]
 gi|21739842|emb|CAD38948.1| hypothetical protein [Homo sapiens]
 gi|117646792|emb|CAL37511.1| hypothetical protein [synthetic construct]
 gi|119583932|gb|EAW63528.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_a [Homo
           sapiens]
 gi|208966202|dbj|BAG73115.1| elongation protein 3 homolog [synthetic construct]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|224008074|ref|XP_002292996.1| histone acetyltransferase gcn5-type hat [Thalassiosira pseudonana
           CCMP1335]
 gi|220971122|gb|EED89457.1| histone acetyltransferase gcn5-type hat [Thalassiosira pseudonana
           CCMP1335]
          Length = 552

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  RI +GVQS+ E   R   R H  S    + HLA+
Sbjct: 208 IGITIETRPDYCLKPHLSEMLGYGCTRIEIGVQSIYESVARETNRGHTVSAVANSFHLAK 267

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ +T +  E     ++  D L LY   + +GT  Y++ K 
Sbjct: 268 DCGFKVVTHMMPDLPNTGLERDLTGFS-EFFENPAFRPDGLKLYPTLVIRGTGLYELWKT 326

Query: 222 G 222
           G
Sbjct: 327 G 327


>gi|281347174|gb|EFB22758.1| hypothetical protein PANDA_002345 [Ailuropoda melanoleuca]
          Length = 489

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 205 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 264

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 265 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 323

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 324 ELWKSG 329


>gi|62897655|dbj|BAD96767.1| elongation protein 3 homolog [Homo sapiens]
          Length = 524

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 188 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 247

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 248 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 306

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 307 ELWKSG 312


>gi|28210931|ref|NP_781875.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
 gi|28203370|gb|AAO35812.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 351

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 13/210 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFG 77
           + ++V    CV  C +C+ NS     +V  + + +  + T +Q + + T    I   FFG
Sbjct: 8   IPIFVPHEGCVHNCVFCNQNSITGISEVIDDKYTKDTIETYLQTINK-TQETIIEVSFFG 66

Query: 78  GGTPSL-IEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVE---VNNFQGYRKAGVNR 132
           G   ++ I  Q   L    +AK +     ++ I +   P  ++   + N + Y+   V+ 
Sbjct: 67  GSFTAIDINKQKRLL---KVAKEYKEKGLIDFIRLSTRPDYIDDAILTNLKDYK---VDI 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQSL+E+ L+   R H+  +   A  L       +   ++  LP  +  +      
Sbjct: 121 IELGVQSLDEEVLKKSARGHSEKDVKEASKLIHEYGFTLGHQVMLGLPGDSFEKDIKTAL 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + +        +Y   + K T   KM+K+G
Sbjct: 181 KVIEMKPKICRIYPALVIKNTPMEKMYKEG 210


>gi|289826617|ref|ZP_06545639.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 210

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 9   ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 68

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 69  RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 128

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 129 WEAGRL----NGIELDDYTLT 145


>gi|114619483|ref|XP_001165334.1| PREDICTED: elongation protein 3 homolog isoform 1 [Pan troglodytes]
 gi|114619485|ref|XP_001165363.1| PREDICTED: elongation protein 3 homolog isoform 2 [Pan troglodytes]
 gi|114619487|ref|XP_519682.2| PREDICTED: elongation protein 3 homolog isoform 6 [Pan troglodytes]
 gi|114619489|ref|XP_001165434.1| PREDICTED: elongation protein 3 homolog isoform 3 [Pan troglodytes]
          Length = 532

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 196 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 255

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 256 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 314

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 315 ELWKSG 320


>gi|298530307|ref|ZP_07017709.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509681|gb|EFI33585.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 351

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 4/204 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           V++ +  C  KC YC   +   +     E  +Q    ++  + +   P   S  FFGG T
Sbjct: 23  VFLPFSGCPFKCIYCSQEAQTGQQPTPHEVQVQRIHQDICTLFK-KKPEPFSLGFFGG-T 80

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            + +      L L    +     +   I     P  ++    +  R  GV+ + LG+QS 
Sbjct: 81  FTALPAATQKLFLKTALELRRAGAVSHIRCSTRPDCIDQGRIRLLRDYGVDMVELGIQSF 140

Query: 141 EEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + + L    R +   EA+ A++ + +N    +   L+  LP      +  +LQ       
Sbjct: 141 DSRVLSLSKRGYGGEEALDASMRIKQNSL-ELGIQLMPGLPGSDSASFARDLQATAEMQP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + LY   + + TL  +    G+
Sbjct: 200 AVVRLYPCLVLEDTLLARQWSRGE 223


>gi|109085993|ref|XP_001110226.1| PREDICTED: elongator complex protein 3-like isoform 2 [Macaca
           mulatta]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|258645790|ref|ZP_05733259.1| radical SAM protein [Dialister invisus DSM 15470]
 gi|260403161|gb|EEW96708.1| radical SAM protein [Dialister invisus DSM 15470]
          Length = 316

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKA----GVN-RISLGVQSLEEQSLRFLGRNHNASEAI-A 159
           V + +   P  +  +  +  R+A    G N  + LG+QS+   +L  +GR H  +E I A
Sbjct: 112 VGLAVSTRPDCIHESYLEVLREAQGKYGTNITVELGLQSVNPHTLLKIGRCHTVAEFIDA 171

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           A+ + R  F  +   +I  LP       E   +      V  + ++ L I KGT   KM+
Sbjct: 172 ALQIGRYHF-DLCAHIIADLPWDDRIDVEEVAKLVSVLPVTEIKIHSLYIIKGTKLAKMY 230

Query: 220 KDGDL-VLPSENVA 232
           + GD+ +LP E  A
Sbjct: 231 EKGDIKLLPPEEYA 244


>gi|195539533|ref|NP_001124234.1| elongator complex protein 3 [Bos taurus]
 gi|145558900|sp|Q2KJ61|ELP3_BOVIN RecName: Full=Elongator complex protein 3
 gi|158455138|gb|AAI05501.2| ELP3 protein [Bos taurus]
 gi|296484941|gb|DAA27056.1| elongator complex protein 3 [Bos taurus]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|327286268|ref|XP_003227853.1| PREDICTED: elongator complex protein 3-like [Anolis carolinensis]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++   ++   ++  LP    ++ + Q+ +E     ++  D + LY   + +GT  Y
Sbjct: 271 FHLAKDAGFKVVAHMMPDLPNMGLERDIDQF-VEFFENPAFRPDGMKLYPTLVIRGTGLY 329

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G       +  VDL
Sbjct: 330 ELWKTGRYKSYPPSTLVDL 348


>gi|213162527|ref|ZP_03348237.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 33

 Score = 44.7 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/33 (54%), Positives = 27/33 (81%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           ++++ EIT+EANP +VE + F  Y++AGVNRIS
Sbjct: 1   MAADAEITMEANPGTVEADRFVDYQRAGVNRIS 33


>gi|50421257|ref|XP_459174.1| DEHA2D15884p [Debaryomyces hansenii CBS767]
 gi|49654841|emb|CAG87345.1| DEHA2D15884p [Debaryomyces hansenii]
          Length = 558

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 222 VGITIETRPDYCTETHLSDMLKYGCTRLEVGVQSVYEDVARDTNRGHTVKSVCETFAVAK 281

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 282 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYELW 338

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 339 KKGLYKSYNANALIDL 354


>gi|328874337|gb|EGG22702.1| elongation protein 3 [Dictyostelium fasciculatum]
          Length = 563

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 6/145 (4%)

Query: 97  AKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
           A  ++  SN++   ITIE  P      +       G  R+ +GVQS+ E   R   R H 
Sbjct: 220 AVKYSEQSNIKCVGITIETRPDHCLKLHLSNMLTYGCTRLEIGVQSVYEDIARDTNRGHT 279

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIE 210
               + +  LA++   ++   ++  LP   M +     ME      +  D L +Y   + 
Sbjct: 280 VKATLESFQLAKDSGFKVVAHMMPDLPNMGMERDIYGFMEFFENPDFRADGLKIYPTLVI 339

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDL 235
           +GT  Y++ K G     + +  VDL
Sbjct: 340 RGTGLYELWKTGTYKNYAPDALVDL 364


>gi|114619481|ref|XP_001165496.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
          Length = 499

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|74313748|ref|YP_312167.1| hypothetical protein SSON_3359 [Shigella sonnei Ss046]
 gi|73857225|gb|AAZ89932.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323165175|gb|EFZ50965.1| radical SAM superfamily protein [Shigella sonnei 53G]
          Length = 309

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++ +++L  + R H+ +       LAR    ++   LI  LP + + +    L+
Sbjct: 142 LELGLQTVHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGLAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|126179989|ref|YP_001047954.1| ELP3 family histone acetyltransferase [Methanoculleus marisnigri
           JR1]
 gi|125862783|gb|ABN57972.1| histone acetyltransferase, ELP3 family [Methanoculleus marisnigri
           JR1]
          Length = 530

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V  T E  P      +       GV ++ LGVQ ++++ L +  R H  ++++AA  L R
Sbjct: 208 VAATFETRPDWCREEHIDRMLSMGVTKVELGVQHVDDRLLDYNRRGHAVADSVAANCLLR 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ F ++  LP  ++        EL     +  D L +Y   +  G+    + + G
Sbjct: 268 DAGLKVGFHMMPNLPAASIEDDRRMFRELFADPRFRPDFLKIYPTLVTPGSEIEALWERG 327

Query: 223 DLVLPSENVAVDLYNLTQSI 242
           + +  +E V +DL    +S+
Sbjct: 328 EYLPYTEEVLIDLVAYAKSL 347


>gi|109085995|ref|XP_001110043.1| PREDICTED: elongator complex protein 3-like isoform 1 [Macaca
           mulatta]
          Length = 499

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|322615333|gb|EFY12254.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618308|gb|EFY15199.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622887|gb|EFY19731.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626791|gb|EFY23588.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631360|gb|EFY28120.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635373|gb|EFY32087.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643372|gb|EFY39936.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647056|gb|EFY43557.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651581|gb|EFY47954.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655051|gb|EFY51362.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657654|gb|EFY53922.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664150|gb|EFY60348.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667433|gb|EFY63595.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674681|gb|EFY70773.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675686|gb|EFY71759.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682322|gb|EFY78345.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684925|gb|EFY80923.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195870|gb|EFZ81041.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198987|gb|EFZ84084.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204313|gb|EFZ89322.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207660|gb|EFZ92607.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211287|gb|EFZ96131.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214771|gb|EFZ99520.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221251|gb|EGA05677.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224007|gb|EGA08300.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230343|gb|EGA14462.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233319|gb|EGA17413.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239356|gb|EGA23406.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242393|gb|EGA26419.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246903|gb|EGA30869.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254164|gb|EGA37984.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255281|gb|EGA39058.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262744|gb|EGA46300.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264054|gb|EGA47562.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269440|gb|EGA52895.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 309

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQGVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|164658598|ref|XP_001730424.1| hypothetical protein MGL_2220 [Malassezia globosa CBS 7966]
 gi|159104320|gb|EDP43210.1| hypothetical protein MGL_2220 [Malassezia globosa CBS 7966]
          Length = 549

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H         HLA+
Sbjct: 214 IGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFHLAK 273

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ M Q++   +   ++  D L LY   + +GT  Y++ + 
Sbjct: 274 DAGYKVVAHMMPDLPNVGVERDMEQFKEYFENP-AFRSDGLKLYPTLVIRGTGLYELWRT 332

Query: 222 G 222
           G
Sbjct: 333 G 333


>gi|77920550|ref|YP_358365.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77546633|gb|ABA90195.1| Predicted Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 306

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 3/137 (2%)

Query: 102 VSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
           VS  V +T+   P       ++  + Y +     + LG+QS  ++SL FL R H+ +  +
Sbjct: 110 VSGVVGLTVGTRPDCCPPAVLDLLEEYHRRTYFWLELGLQSSHDRSLDFLRRGHDYACFL 169

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            A   A+    R+   +I  LP +T        +      VD + L+ L + +GT   ++
Sbjct: 170 EAYTAAKARGLRVCVHVILGLPGETREDMLATAEEMARLQVDGIKLHLLHVLRGTRLGEL 229

Query: 219 HKDGDLVLPSENVAVDL 235
           ++ GD+ +  ++  V L
Sbjct: 230 YQQGDINILEQDEYVSL 246


>gi|68478719|ref|XP_716628.1| hypothetical protein CaO19.7387 [Candida albicans SC5314]
 gi|46438300|gb|EAK97633.1| hypothetical protein CaO19.7387 [Candida albicans SC5314]
 gi|238881003|gb|EEQ44641.1| hypothetical protein CAWG_02915 [Candida albicans WO-1]
          Length = 547

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 215 VGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAK 274

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 275 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELW 331

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 332 KQGLYKSYNANALIDL 347


>gi|300120540|emb|CBK20094.2| unnamed protein product [Blastocystis hominis]
          Length = 529

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  V ITIE  P      +     + G  RI +GVQS+ E   R   R H  +    +  
Sbjct: 157 SKCVAITIETRPDYCLKPHLNNMLRYGCTRIEIGVQSVYEDVARDTNRGHTVTAVCNSFE 216

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            +++   ++   ++  LP     +  +   EL    ++  D L LY   + +GT  Y++ 
Sbjct: 217 QSKDCGFKVVTHMMPDLPNMGYERDILGFKELFENPAFRPDGLKLYPTLVIRGTGLYELW 276

Query: 220 KDGDLVLPSENVAVDL 235
           K G       N+ VDL
Sbjct: 277 KTGKYRNYPPNMLVDL 292


>gi|296242210|ref|YP_003649697.1| histone acetyltransferase, ELP3 family [Thermosphaera aggregans DSM
           11486]
 gi|296094794|gb|ADG90745.1| histone acetyltransferase, ELP3 family [Thermosphaera aggregans DSM
           11486]
          Length = 479

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P   +  +       G  ++ LGVQS+ +  L+ + R H   ++I +  + R
Sbjct: 145 IGLTIETRPDYGKEKHADELLSYGATKVELGVQSIHDDVLQRVNRGHGVRDSIESTRILR 204

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LP     + ++E+ + L     +  D L +Y   + +GT  Y+  K 
Sbjct: 205 DAGFKICYHVMLGLPGSDFDR-DLEMIKTLFENPDFRPDMLKIYPTEVIEGTKLYEWWKQ 263

Query: 222 G 222
           G
Sbjct: 264 G 264


>gi|119583933|gb|EAW63529.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_b [Homo
           sapiens]
          Length = 455

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|149241028|ref|XP_001526261.1| hypothetical protein LELG_02819 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450384|gb|EDK44640.1| hypothetical protein LELG_02819 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 549

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 217 VGITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAK 276

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 277 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYELW 333

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 334 KQGLYKSYNANALIDL 349


>gi|312090909|ref|XP_003146791.1| hypothetical protein LOAG_11221 [Loa loa]
 gi|307758044|gb|EFO17278.1| hypothetical protein LOAG_11221 [Loa loa]
          Length = 543

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 212 IGITIETRPDYCLPKHLDEMLSYGCTRLEIGVQSVYEDIARDTNRGHTVKAVCECFKMAK 271

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ M Q+ +EL     +  D L LY   + +GT  Y++ + 
Sbjct: 272 DTGYKVVIHMMPNLPNVGIERDMEQF-IELFENPEFRPDGLKLYPTLVIRGTGLYELWRT 330

Query: 222 GDLVLPSENVAVDL 235
           G        V VDL
Sbjct: 331 GRYKSYPPEVLVDL 344


>gi|238910123|ref|ZP_04653960.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQSVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|91773926|ref|YP_566618.1| ELP3 family histone acetyltransferase [Methanococcoides burtonii
           DSM 6242]
 gi|91712941|gb|ABE52868.1| Elongator complex protein 3 [Methanococcoides burtonii DSM 6242]
          Length = 548

 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 3/149 (2%)

Query: 97  AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE 156
           A    +  N  IT E  P     ++       G  ++ +GVQS+ +  L  + R H+  +
Sbjct: 210 ANETAIVRNTGITFETRPDWTNTDHVDRMLDLGATKVEIGVQSVYDFVLERMRRGHSVQD 269

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGT 213
           ++ +  + R+   ++ F ++  LP     +     ++  S   +  D+L +Y   + +GT
Sbjct: 270 SVDSNRVLRDSALKVGFHMMPHLPGMDSARDLRGFKKLFSDSNFMPDYLKIYPTLVTEGT 329

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             Y M   G+     +  A++L    ++I
Sbjct: 330 ELYDMWSGGEYEALGDEEAIELLADIKAI 358


>gi|16762091|ref|NP_457708.1| hypothetical protein STY3508 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766624|ref|NP_462239.1| FeS oxidoreductase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143580|ref|NP_806922.1| hypothetical protein t3246 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167994522|ref|ZP_02575613.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168243165|ref|ZP_02668097.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168463445|ref|ZP_02697362.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194451906|ref|YP_002047358.1| hypothetical protein SeHA_C3627 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197250030|ref|YP_002148254.1| radical SAM protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|200388282|ref|ZP_03214894.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|213053136|ref|ZP_03346014.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213648875|ref|ZP_03378928.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857505|ref|ZP_03384476.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25305777|pir||AH0906 conserved hypothetical protein STY3508 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421887|gb|AAL22198.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504394|emb|CAD07846.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139215|gb|AAO70782.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194410210|gb|ACF70429.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195633137|gb|EDX51551.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213733|gb|ACH51130.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|199605380|gb|EDZ03925.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205327637|gb|EDZ14401.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337918|gb|EDZ24682.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|261248494|emb|CBG26331.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995528|gb|ACY90413.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159878|emb|CBW19397.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914356|dbj|BAJ38330.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225246|gb|EFX50305.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323131689|gb|ADX19119.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332990187|gb|AEF09170.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|56415258|ref|YP_152333.1| hypothetical protein SPA3197 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364188|ref|YP_002143825.1| hypothetical protein SSPA2984 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56129515|gb|AAV79021.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095665|emb|CAR61233.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|269215949|ref|ZP_06159803.1| hypothetical protein HMPREF0762_00622 [Slackia exigua ATCC 700122]
 gi|269130208|gb|EEZ61286.1| hypothetical protein HMPREF0762_00622 [Slackia exigua ATCC 700122]
          Length = 379

 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+PS++    +  I+    +   ++   E  +EA P +V   +  G+ +  V+ +SL V
Sbjct: 72  GGSPSIMNGDRLGRIVAAARRGLPLAHGCEACVEALPQTVCTASLTGWSQGSVDAVSLRV 131

Query: 138 QSLEEQSLRFLGRNHNASEAI--AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            S+ E+ L  +G  ++A +A+  A + L R     +   ++  +P QT       L+  +
Sbjct: 132 GSVHERELAAIGATYDA-DAVRNAVLFLDRFHVDTLEAVIVVGIPGQTPQSLRRTLRACV 190

Query: 196 SY 197
            +
Sbjct: 191 GF 192


>gi|320583643|gb|EFW97856.1| Subunit of Elongator complex [Pichia angusta DL-1]
          Length = 555

 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQS+ E   R   R H           A+
Sbjct: 222 VGITIETRPDYCTETHLDDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFCYAK 281

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 282 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYELW 338

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N+ +DL
Sbjct: 339 KKGLYKSYNANMLIDL 354


>gi|331664825|ref|ZP_08365730.1| radical SAM protein, family [Escherichia coli TA143]
 gi|331058073|gb|EGI30055.1| radical SAM protein, family [Escherichia coli TA143]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  T+    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|241953563|ref|XP_002419503.1| Elongator complex subunit, putative; RNA polymerase II Elongator
           subunit, putative; histone acetyltransferase, putative
           [Candida dubliniensis CD36]
 gi|223642843|emb|CAX43098.1| Elongator complex subunit, putative [Candida dubliniensis CD36]
          Length = 547

 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P            K G  R+ +GVQS+ E   R   R H          +A+
Sbjct: 215 VGITIETRPDYCTETQLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAK 274

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L++   Y        D L LY   + +GT  Y++ 
Sbjct: 275 DAGYKVVSHMMPDLPNVGM---ERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELW 331

Query: 220 KDGDLVLPSENVAVDL 235
           K G     + N  +DL
Sbjct: 332 KQGLYKSYNANALIDL 347


>gi|224419093|ref|ZP_03657099.1| hypothetical protein HcanM9_07457 [Helicobacter canadensis MIT
           98-5491]
 gi|253828030|ref|ZP_04870915.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142602|ref|ZP_07804795.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511436|gb|EES90095.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131633|gb|EFR49250.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 320

 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS+ +++L+F+ R H        I   +    ++   +IY LPK+T       L+
Sbjct: 165 IEYGIQSVYDETLKFINRGHTTEGMEYWIKETKQRGLKVCSHIIYGLPKETKEMMLNSLK 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L +  D + ++ L I + T+  +M+  G+    + N  +DL
Sbjct: 225 QVLDWGSDGIKVHPLYIIEKTILAQMYAKGEYKPITLNEYIDL 267


>gi|323966391|gb|EGB61825.1| SAM protein [Escherichia coli M863]
 gi|327251302|gb|EGE62991.1| radical SAM superfamily protein [Escherichia coli STEC_7v]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + +D Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELDDYTLT 244


>gi|299115984|emb|CBN75985.1| ELP3 like acetyltransferase involved in transcription [Ectocarpus
           siliculosus]
          Length = 605

 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 5/154 (3%)

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVN 131
            +F+   T     P+ + L  + I  N   S+ V  +T+E  P  ++++     R  G  
Sbjct: 217 DLFYAANTTFNERPERLTL-EEEIKLNEDASTRVIGLTLETRPDVIDLDEIARLRSYGCT 275

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+ +GVQ  +   L+ + R H+    +  + L ++   ++   L+  LP  T+       
Sbjct: 276 RLQIGVQHTDNAILKKINRGHDVEATMRCLRLLKDNCFKVDIHLMPNLPGSTVEGDVEMF 335

Query: 192 QRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            + L       D   +Y  +I   T+  K H++G
Sbjct: 336 DKVLGDPDLQADQWKIYPCSIVPWTVIDKWHREG 369


>gi|157374266|ref|YP_001472866.1| putative radical SAM protein [Shewanella sediminis HAW-EB3]
 gi|157316640|gb|ABV35738.1| conserved hypothetical radical SAM protein [Shewanella sediminis
           HAW-EB3]
          Length = 308

 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 11/190 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    ++ G E  IQ  L   Q   ++ G  S    +F   T +  E + +  
Sbjct: 45  CTYCNVASF--NHEHGTELSIQEQLD--QGRERVAGRSSKYIAYFQAYTSTYDEYRVLKT 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRF 147
             D   K+  +   V + +   P  V    +     Y+  G+   + LG+QS ++++L+ 
Sbjct: 101 KYDEAIKDPDI---VGLCVGTRPDCVSDDVIELLASYQDRGIEVWLELGLQSAKDKTLKR 157

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H  ++ I  +  AR    ++   LI  LP +    +   L   L+  VD L L+ L
Sbjct: 158 INRGHLMADYIDTVTRARARGIKVCTHLILGLPDEEHQDYLNSLNAVLAAGVDGLKLHPL 217

Query: 208 TIEKGTLFYK 217
            I +G+   K
Sbjct: 218 HIVEGSTMAK 227


>gi|91095161|ref|XP_968028.1| PREDICTED: similar to elongation protein 3 homolog [Tribolium
           castaneum]
 gi|270015780|gb|EFA12228.1| hypothetical protein TcasGA2_TC004103 [Tribolium castaneum]
          Length = 591

 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     K G  R+ +GVQS+ E   R   R H         +LA+
Sbjct: 218 IGITIETRPDYCLQKHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFNLAK 277

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 278 DAGYKVVSHMMPDLPNVDLERDIEQF-IEFFENPNFRADGLKIYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDL 235
           G       ++ VDL
Sbjct: 337 GRYKSYPPSILVDL 350


>gi|260773474|ref|ZP_05882390.1| hypothetical protein VIB_001944 [Vibrio metschnikovii CIP 69.14]
 gi|260612613|gb|EEX37816.1| hypothetical protein VIB_001944 [Vibrio metschnikovii CIP 69.14]
          Length = 313

 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 46/96 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+     +    AR +  ++   LI  LPK+T +     LQ
Sbjct: 142 LELGLQTANNSTLKRINRGHDFDCYQSIAQRARALGIKICTHLIVGLPKETASDNVATLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           + +    D + L+ L I  G+   K  + G LV P+
Sbjct: 202 QVVEVGTDGIKLHGLHIVDGSTMAKAWRAGKLVAPT 237


>gi|213616378|ref|ZP_03372204.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 290

 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|242309926|ref|ZP_04809081.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523223|gb|EEQ63089.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 317

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 44/91 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS+ +++L+ + R H   E    I   +    ++   +IY LP +T       L 
Sbjct: 162 IEYGIQSVYDETLKLINRGHGTEEMEYWISQTKQRGLKVCSHIIYGLPNETKEMMLHSLN 221

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           + L +  D + ++ L I + T+   MHK G+
Sbjct: 222 KVLEWGSDGIKVHPLYIIEKTILALMHKKGE 252


>gi|46907892|ref|YP_014281.1| hypothetical protein LMOf2365_1685 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47093773|ref|ZP_00231522.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 4b H7858]
 gi|226224264|ref|YP_002758371.1| hypothetical protein Lm4b_01674 [Listeria monocytogenes Clip81459]
 gi|254824275|ref|ZP_05229276.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852288|ref|ZP_05241636.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254931604|ref|ZP_05264963.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300766054|ref|ZP_07076023.1| hypothetical protein LMHG_12484 [Listeria monocytogenes FSL N1-017]
 gi|46881161|gb|AAT04458.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47017860|gb|EAL08644.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 4b H7858]
 gi|225876726|emb|CAS05435.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605594|gb|EEW18202.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583157|gb|EFF95189.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593510|gb|EFG01271.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513256|gb|EFK40334.1| hypothetical protein LMHG_12484 [Listeria monocytogenes FSL N1-017]
 gi|328465027|gb|EGF36306.1| hypothetical protein LM1816_09702 [Listeria monocytogenes 1816]
 gi|332312103|gb|EGJ25198.1| Putative protein ytqA [Listeria monocytogenes str. Scott A]
          Length = 321

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +H  +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|169825222|ref|YP_001692833.1| putative Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
 gi|167832027|dbj|BAG08943.1| putative Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
          Length = 311

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 5/133 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNAS 155
            V   V I++   P  + + + +  ++    +     I LG+Q+   ++L+ + R H  +
Sbjct: 107 VVEDVVAISVSTRPDCIVIEHLEILKQLQQEKHVDIIIELGLQTSNNKTLKIINRQHTVA 166

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           + I A  + +    R+   +I ALP   M       +      VD   ++ L I K T+ 
Sbjct: 167 DFIRACLMIKKYGFRICTHVILALPWDDMDDVRETAKLLSVLKVDECKIHSLYIPKYTIL 226

Query: 216 YKMHKDGDLVLPS 228
            K +K+G + L S
Sbjct: 227 AKWYKEGKVQLKS 239


>gi|330799437|ref|XP_003287751.1| elongation protein 3 [Dictyostelium purpureum]
 gi|325082206|gb|EGC35695.1| elongation protein 3 [Dictyostelium purpureum]
          Length = 558

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 97  AKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
           A  ++  SNV+   ITIE  P      +       G  R+ +GVQS+ E   R   R H 
Sbjct: 216 AVKYSEQSNVKCIGITIETRPDHCLKLHLSNMLVYGCTRLEIGVQSVFEDIARDTNRGHT 275

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIE 210
               + +  LA++   ++   ++  LP   M +     ME     ++  D L +Y   + 
Sbjct: 276 VRAVLESFQLAKDSGFKVVAHMMPDLPNMGMERDIYGFMEFFENPAFRADGLKIYPTLVI 335

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDL 235
           +GT  Y++ K G     S +  VDL
Sbjct: 336 RGTGLYELWKTGTYKNYSPDSLVDL 360


>gi|300711177|ref|YP_003736991.1| histone acetyltransferase, ELP3 family protein [Halalkalicoccus
           jeotgali B3]
 gi|299124860|gb|ADJ15199.1| histone acetyltransferase, ELP3 family protein [Halalkalicoccus
           jeotgali B3]
          Length = 551

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 8/175 (4%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNV 106
           QE+F++  L  M        P       F        +  + + + D IA+N T    N+
Sbjct: 172 QEHFVKRALEAMNDFDPENPPEPTEGESFAQSH----DEYDFSYLEDVIAENETNGVRNI 227

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
             T E  P   +          G  ++ +GVQ+  E+  R + R H A  +I A    R+
Sbjct: 228 GTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGAQASIDANRRLRD 287

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYA---VDHLSLYQLTIEKGTLFYKM 218
              ++ F ++   P  ++     + Q+    A    D+L +Y   + +GT  Y M
Sbjct: 288 AAFKVGFHMMPGQPGMSLDMCREDFQQLFEDANWRPDYLKIYPNLVVRGTRTYDM 342


>gi|194434507|ref|ZP_03066767.1| radical SAM protein, TIGR01212 family [Shigella dysenteriae 1012]
 gi|194417286|gb|EDX33395.1| radical SAM protein, TIGR01212 family [Shigella dysenteriae 1012]
 gi|332086379|gb|EGI91526.1| radical SAM superfamily protein [Shigella dysenteriae 155-74]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R HN +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHNFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|126304205|ref|XP_001382052.1| PREDICTED: similar to Elongation protein 3 homolog (S. cerevisiae)
           [Monodelphis domestica]
          Length = 607

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++   ++   ++  LP    ++ + Q+  E     ++  D + LY   + +GT  Y
Sbjct: 271 FHLAKDAGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGMKLYPTLVIRGTGLY 329

Query: 217 KMHKDGDLVLPSENVAVDL 235
           ++ K G     S +  V+L
Sbjct: 330 ELWKSGRYKSYSPSCLVEL 348


>gi|160946962|ref|ZP_02094165.1| hypothetical protein PEPMIC_00923 [Parvimonas micra ATCC 33270]
 gi|158447346|gb|EDP24341.1| hypothetical protein PEPMIC_00923 [Parvimonas micra ATCC 33270]
          Length = 315

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 13/123 (10%)

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
           + NFQ  R   ++   LG+Q++  ++L  L R H  +E I A++L      R+   +I  
Sbjct: 134 LKNFQKNRNLEID-FELGLQTVNYRTLIKLNRGHTLAEFINAVNLIHKFGFRVCTHIIVG 192

Query: 179 LPKQTMTQWEMELQRALS------YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           LP      W+ EL    S        V+ + L+ L I K T+  +M+  G++ L S+   
Sbjct: 193 LP------WDDELDMVESAKILSALKVEEVKLHSLYIVKNTVLGEMYSKGEIELISKAKF 246

Query: 233 VDL 235
           +DL
Sbjct: 247 IDL 249


>gi|312622597|ref|YP_004024210.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203064|gb|ADQ46391.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 341

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 8/163 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++       +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDEERLILLKFYNVRTIELGIQSMFDHVLNACARGHTAQHSKNAMEMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +   ++  LPK T  + ++E  + L S++ D   +Y   + +GT   KM++ G+   
Sbjct: 148 GFLLGVQVMVGLPKST-PEMDIETAKILTSFSPDIARIYPTLVIEGTYLAKMYQKGEYEP 206

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
            S N  V+  +  +SI    G++   +      G +    +NY
Sbjct: 207 LSLNETVERCSQIKSIFIEKGVNVIRV------GLQPTEEINY 243


>gi|269965793|ref|ZP_06179889.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269829591|gb|EEZ83829.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 319

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 4/123 (3%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P +V ++   GY + G    + LG+Q+    +L+ + R H+          AR +  ++ 
Sbjct: 123 PDAV-LDLLSGYVQQGYEIWLELGLQTANNDTLKRINRGHDFECYAEITKRARTLGIKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SEN 230
             LI  LPK+T  +    LQ+ L+   D + L+ L I +G+   K  + G L  P   E 
Sbjct: 182 THLIVGLPKETRAENIETLQKVLTVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEY 241

Query: 231 VAV 233
           VA+
Sbjct: 242 VAI 244


>gi|189190612|ref|XP_001931645.1| elongator complex protein 3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973251|gb|EDU40750.1| elongator complex protein 3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 572

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 232 VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAKTFCLAK 291

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L + + Y        D L +Y   + +GT  Y++ 
Sbjct: 292 DAGFKVVSHMMPDLPNVGM---ERDLDQFIEYFSNPAFRTDGLKIYPTLVIRGTGLYELW 348

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 349 RTGRYKNYTPNALIDI 364


>gi|118579179|ref|YP_900429.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118501889|gb|ABK98371.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 623

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 128 AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           AG+   + +G+QS + + LR +GR+       A + L         FDL+Y LP  ++  
Sbjct: 279 AGITCSLQIGLQSADPRVLRQVGRSFRRDAFAAKVALLNRSGAVFGFDLMYGLPGDSLEG 338

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGT-LFYKMHKDG 222
           +   +  ALS   +HL ++ L I  GT L  +   DG
Sbjct: 339 FRESVDYALSLYPNHLDIFPLAILPGTALAARADADG 375


>gi|218883439|ref|YP_002427821.1| histone acetyltransferase, ELP3 family [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765055|gb|ACL10454.1| histone acetyltransferase, ELP3 family [Desulfurococcus
           kamchatkensis 1221n]
          Length = 491

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  ++ LGVQS+ +  L  + R H+  + I +  + R
Sbjct: 157 VGLTIETRPDYGRERHADEMLHYGATKVELGVQSIYDDVLEIVRRGHSVKDTIESTRILR 216

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LP     + ++E+ + L     +  D L +Y   + +GT  Y   K+
Sbjct: 217 DAGFKICYHIMLGLPGSNPDR-DLEMVKELFTNPDFRPDMLKIYPTEVIEGTTLYTWWKE 275

Query: 222 GDLVLPSENVAVDL 235
           G     S+   ++L
Sbjct: 276 GKYKPYSDEDVIEL 289


>gi|213025314|ref|ZP_03339761.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 233

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 32  ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 91

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 92  RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 151

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 152 WEAGRL----NGIELDDYTLT 168


>gi|327300621|ref|XP_003235003.1| histone acetyltransferase [Trichophyton rubrum CBS 118892]
 gi|326462355|gb|EGD87808.1| histone acetyltransferase [Trichophyton rubrum CBS 118892]
          Length = 576

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 234 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSK 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q       +  D L +Y   + +GT  Y++ + G
Sbjct: 294 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTG 353

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 354 RYKNYTPNALIDI 366


>gi|47222468|emb|CAG12988.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 650

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HL++
Sbjct: 210 VGITIETRPDYCLKRHLGDMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLSK 269

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 270 DAGFKVVAHMMPDLPNMGMERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 329

Query: 223 DLVLPSENVAVDL 235
                + +  VDL
Sbjct: 330 RYKSYTPSDLVDL 342


>gi|307178812|gb|EFN67393.1| Elongator complex protein 3 [Camponotus floridanus]
          Length = 640

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +  LA+
Sbjct: 217 IGITIETRPDYCLKRHLSDMLRYGCTRLEIGVQSIYEDVARDTNRGHTVRAVCESFQLAK 276

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E  +  ++  D L +Y   + +GT  Y++ K 
Sbjct: 277 DAGFKVIAHMMPDLPNVDFERDVYQF-IEFFKNPAFRADGLKIYPTLVIRGTGLYELWKT 335

Query: 222 GDLVLPSENVAVDL 235
           G     + +V +DL
Sbjct: 336 GRYKSYAASVLIDL 349


>gi|213417169|ref|ZP_03350313.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 255

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|10434125|dbj|BAB14138.1| unnamed protein product [Homo sapiens]
          Length = 547

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVMAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 330 ELWKSG 335


>gi|67484318|ref|XP_657379.1| histone acetyltransferase [Entamoeba histolytica HM-1:IMSS]
 gi|56474633|gb|EAL51995.1| histone acetyltransferase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 576

 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P     ++ +   + G  R+ +G+QS+ E   +   R H   + I      +
Sbjct: 223 VALTIETRPDCCSEDHIREMFRYGTTRLEIGLQSIFEDICKECNRGHTVQDCIGCYKRLK 282

Query: 166 NIFPRMSFDLIYALP-----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +   ++   ++  LP     +   T  EM    A  Y  D L LY   + +GT  Y+M +
Sbjct: 283 DAGYKIVTHMMPNLPGVPPERDVFTYSEMFSDGA--YQCDGLKLYPCLVIRGTRLYEMWR 340

Query: 221 DG 222
            G
Sbjct: 341 KG 342


>gi|91226810|ref|ZP_01261463.1| hypothetical protein V12G01_13574 [Vibrio alginolyticus 12G01]
 gi|91188941|gb|EAS75225.1| hypothetical protein V12G01_13574 [Vibrio alginolyticus 12G01]
          Length = 319

 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 4/123 (3%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P +V ++   GY + G    + LG+Q+    +L+ + R H+          AR +  ++ 
Sbjct: 123 PDAV-LDLLSGYVQQGYEIWLELGLQTANNDTLKRINRGHDFECYAEITKRARTLGIKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SEN 230
             LI  LPK+T  +    LQ+ L+   D + L+ L I +G+   K  + G L  P   E 
Sbjct: 182 THLIVGLPKETRAENIETLQKVLAVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEY 241

Query: 231 VAV 233
           VA+
Sbjct: 242 VAI 244


>gi|147906160|ref|NP_001088974.1| elongator complex protein 3 [Xenopus laevis]
 gi|82179179|sp|Q5HZM6|ELP3_XENLA RecName: Full=Elongator complex protein 3
 gi|57033032|gb|AAH88956.1| LOC496354 protein [Xenopus laevis]
          Length = 549

 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HL++
Sbjct: 218 VGITIETRPDYCLKRHLSDMLCYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLSK 277

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D + LY   + +GT  Y++ K 
Sbjct: 278 DAGFKVVSHMMPDLPNMGLERDIEQF-IEFFENPAFRPDGMKLYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDL 235
           G     S +  VDL
Sbjct: 337 GRYRSYSPSTLVDL 350


>gi|326468568|gb|EGD92577.1| histone acetyltransferase [Trichophyton tonsurans CBS 112818]
 gi|326479951|gb|EGE03961.1| elongator complex protein 3 [Trichophyton equinum CBS 127.97]
          Length = 576

 Score = 43.9 bits (102), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 234 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSK 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q       +  D L +Y   + +GT  Y++ + G
Sbjct: 294 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTG 353

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 354 RYKNYTPNALIDI 366


>gi|315048317|ref|XP_003173533.1| elongator complex protein 3 [Arthroderma gypseum CBS 118893]
 gi|311341500|gb|EFR00703.1| elongator complex protein 3 [Arthroderma gypseum CBS 118893]
          Length = 576

 Score = 43.9 bits (102), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 234 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSK 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q       +  D L +Y   + +GT  Y++ + G
Sbjct: 294 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTG 353

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 354 RYKNYTPNALIDI 366


>gi|322417744|ref|YP_004196967.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124131|gb|ADW11691.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 619

 Score = 43.9 bits (102), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +   LR +GR  +  + +    L         FDLIY LP  T   +   L 
Sbjct: 282 LQIGLQSADPAVLRAVGRGFDRDDFVNRAFLLNQSGAIFGFDLIYGLPGDTPELFRFSLD 341

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
            ALS   +HL ++ L +  GT
Sbjct: 342 FALSLYPNHLDIFPLAVLPGT 362


>gi|167375949|ref|XP_001733791.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165904966|gb|EDR30088.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 576

 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P     ++ +   + G  R+ +G+QS+ E   +   R H   + I      +
Sbjct: 223 VALTIETRPDCCSEDHIREMFRYGTTRLEIGLQSIFEDICKECNRGHTVRDCIGCYKRLK 282

Query: 166 NIFPRMSFDLIYALP-----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +   ++   ++  LP     +   T  EM    A  Y  D L LY   + +GT  Y+M +
Sbjct: 283 DAGYKIVTHMMPNLPGVPPERDVFTYSEMFSDGA--YQCDGLKLYPCLVIRGTRLYEMWR 340

Query: 221 DG 222
            G
Sbjct: 341 KG 342


>gi|255521500|ref|ZP_05388737.1| hypothetical protein LmonocFSL_09810 [Listeria monocytogenes FSL
           J1-175]
          Length = 291

 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +H  +    R+   +I  LPK+T        +
Sbjct: 124 LELGLQSAHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTR 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 184 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 226


>gi|296809195|ref|XP_002844936.1| elongator complex protein 3 [Arthroderma otae CBS 113480]
 gi|238844419|gb|EEQ34081.1| elongator complex protein 3 [Arthroderma otae CBS 113480]
          Length = 576

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 234 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSK 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q       +  D L +Y   + +GT  Y++ + G
Sbjct: 294 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTG 353

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 354 RYKNYTPNALIDI 366


>gi|158320492|ref|YP_001512999.1| radical SAM domain-containing protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140691|gb|ABW19003.1| Radical SAM domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 342

 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 14/199 (7%)

Query: 32  CPY-CDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPSL 83
           CP+ C F +  +   +G     E  ++    +++ ++ +  P+ I+  F+GG   G P  
Sbjct: 17  CPHDCSFCNQKKIAGIGTDVTAEQVLEIIEAQLEHLKDVNRPKEIA--FYGGSFTGLPYE 74

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + Q +A+  +    N+      +I I   P  +     Q     GV+ I LGVQS +  
Sbjct: 75  QQRQLLAMAYEKKKLNFIQ----DIRISTRPDYINEEILQLLGSYGVSIIELGVQSTDPT 130

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H+  +   A  L +    ++   ++  L   T  +     +  +    D + 
Sbjct: 131 VLELNNRGHSKEDVYRAAALIKKQNIQLGLQMMVGLYGDTKEKMLRTARDIIDCTPDFVR 190

Query: 204 LYQLTIEKGTLFYKMHKDG 222
           +Y   I + TL  K++++G
Sbjct: 191 IYPTIIIQDTLLEKLYREG 209


>gi|325968319|ref|YP_004244511.1| histone acetyltransferase, ELP3 family [Vulcanisaeta moutnovskia
           768-28]
 gi|323707522|gb|ADY01009.1| histone acetyltransferase, ELP3 family [Vulcanisaeta moutnovskia
           768-28]
          Length = 508

 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P  V+  +     + G  R+ +GVQS+ +  L+ + R H   E I A    +
Sbjct: 149 VALELETRPDFVKPKHIDIMLRLGFTRVEIGVQSIYDDVLKRVKRGHGVKEVIEATQYLK 208

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYK 217
           +   ++ + ++  LP  T  + ++E+ + +    S+  D + +Y   + K T  Y+
Sbjct: 209 DSAYKVCYHIMPGLPGSTPDR-DLEMVKTIFSDPSFMPDCIKVYPTFVVKDTELYE 263


>gi|307205769|gb|EFN83999.1| Probable elongator complex protein 3 [Harpegnathos saltator]
          Length = 533

 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +  LA+
Sbjct: 202 IGITIETRPDYCLKKHLSDMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLAK 261

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 262 DAGFKVIAHMMPDLPNVDIERDIYQF-IEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 320

Query: 222 GDLVLPSENVAVDL 235
           G     + +V +DL
Sbjct: 321 GRYKSYAPSVLIDL 334


>gi|71406538|ref|XP_805799.1| histone acethyltransferase-like protein [Trypanosoma cruzi strain
           CL Brener]
 gi|70869346|gb|EAN83948.1| histone acethyltransferase-like protein, putative [Trypanosoma
           cruzi]
          Length = 678

 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++     Q  R+ G  R+ LGVQ  ++  L  + R     EAI AI L +
Sbjct: 273 IGVTLETRPDTINEEMLQQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTREEAIRAIKLLK 332

Query: 166 NIFPRMSFDLIYALPKQT 183
           +   ++   L+  LP  T
Sbjct: 333 DSCFKVDIHLMPDLPGST 350


>gi|324115185|gb|EGC09149.1| SAM protein [Escherichia fergusonii B253]
          Length = 320

 Score = 43.5 bits (101), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  T+    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           R +   VD + L+ L I KG++  K  + G L
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL 244


>gi|307244263|ref|ZP_07526378.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306492413|gb|EFM64451.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 356

 Score = 43.5 bits (101), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 3/149 (2%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRI 133
           FFGG   ++ + + + L+   +AK +     V +I +   P  ++       +  G   I
Sbjct: 61  FFGGSFTAIDKDKQVELL--SVAKEYKDRGLVKDIRMSTRPDCIDREGLDLVKSYGATII 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQS++E+ L    R HN+     +  L +    R+    +  LP  T  +     + 
Sbjct: 119 ELGVQSMDEEVLVESLRGHNSKIVYESGSLIKEAGLRLGLQQMIGLPGDTEEKCIRTARE 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                 D + +Y   I K T   + +KDG
Sbjct: 179 FAKIGSDFVRIYPTLIIKETGLEQSYKDG 207


>gi|288560940|ref|YP_003424426.1| histone acetyltransferase ELP3 family [Methanobrevibacter
           ruminantium M1]
 gi|288543650|gb|ADC47534.1| histone acetyltransferase ELP3 family [Methanobrevibacter
           ruminantium M1]
          Length = 568

 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 18/166 (10%)

Query: 86  PQNIALILDGIAK---NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           P N  +++D I +   N  V   + +T E  P   +  +       GV R+ LGVQ++  
Sbjct: 207 PPNDYVLIDDIQRINENSKVRC-IGMTFETRPDYCKEPHVDRMLDMGVTRVELGVQTIYN 265

Query: 143 QSLRFLGRNHNASEAI------------AAIHLARNIFPRMSFD-LIYALPKQTMTQWEM 189
                + R H   + I             A+H+   +FP    +  I   P+Q +  ++ 
Sbjct: 266 HIYEKIKRGHKVEDVIEANRILRDSGVKVAMHMMPGLFPLARENPRIEQCPEQDLKMFK- 324

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           E+    ++  D L +Y   + +G+  +K++K+G     ++  AV+L
Sbjct: 325 EIFNNENFKPDMLKIYPCLVTEGSELHKLYKEGKYRPYTDEEAVEL 370


>gi|183598967|ref|ZP_02960460.1| hypothetical protein PROSTU_02411 [Providencia stuartii ATCC 25827]
 gi|188021183|gb|EDU59223.1| hypothetical protein PROSTU_02411 [Providencia stuartii ATCC 25827]
          Length = 300

 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + + +   P  V    ++   GYR+ G    + LG+QS  +++L  + R H  +E    +
Sbjct: 111 IGLCVGTRPDCVPQDVLSLLSGYREHGYEIWLELGLQSAHDKTLHRINRGHGFAEYQKTV 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR +  ++   LI  LP ++       L++ L    D + L+ L I +G++  K  + 
Sbjct: 171 TKARQLGLKVCTHLICGLPGESTLMNMQTLEKVLECGTDGIKLHPLHIVEGSIMAKSWRA 230

Query: 222 GDLV 225
           G L 
Sbjct: 231 GRLA 234


>gi|58260746|ref|XP_567783.1| Pol II transcription elongation factor [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117315|ref|XP_772884.1| hypothetical protein CNBK2550 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255502|gb|EAL18237.1| hypothetical protein CNBK2550 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229864|gb|AAW46266.1| Pol II transcription elongation factor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 557

 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H+++
Sbjct: 218 VGITIETRPDYCLKPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMSK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQ--WEM-ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP     +  W+  E     ++  D L LY   + +GT  Y++ + G
Sbjct: 278 DAGYKIVAHMMPDLPNCGTERDIWQFQEFFENPAFRSDGLKLYPTLVIRGTGLYELWRTG 337

Query: 223 DLVLPSENVAVDL 235
                  N  VD+
Sbjct: 338 KYKNYPPNALVDI 350


>gi|321264159|ref|XP_003196797.1| pol II transcription elongation factor [Cryptococcus gattii WM276]
 gi|317463274|gb|ADV25010.1| Pol II transcription elongation factor, putative [Cryptococcus
           gattii WM276]
          Length = 557

 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H+++
Sbjct: 218 VGITIETRPDYCLKPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMSK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQ--WEM-ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP     +  W+  E     ++  D L LY   + +GT  Y++ + G
Sbjct: 278 DAGYKIVAHMMPDLPNCGTERDIWQFQEFFENPAFRSDGLKLYPTLVIRGTGLYELWRTG 337

Query: 223 DLVLPSENVAVDL 235
                  N  VD+
Sbjct: 338 KYKNYPPNALVDI 350


>gi|82523810|emb|CAI78553.1| histone acetyltransferase [uncultured Chloroflexi bacterium]
          Length = 423

 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           G  + +L+E Q I             S NV + IE  P  ++       R+ GV ++ +G
Sbjct: 76  GVDSTTLVEAQQI--------NEAAASRNVGLVIETRPDEIKPAELAWMRRLGVTKLQMG 127

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           VQSL++  LR   R H+  ++  A+ L R
Sbjct: 128 VQSLDDSILRLNRRGHSVVQSHQAVALLR 156


>gi|328713209|ref|XP_001947006.2| PREDICTED: elongator complex protein 3-like isoform 1
           [Acyrthosiphon pisum]
 gi|328713211|ref|XP_003245018.1| PREDICTED: elongator complex protein 3-like isoform 2
           [Acyrthosiphon pisum]
          Length = 547

 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 8/146 (5%)

Query: 97  AKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
           A  ++  SNV+   ITIE  P      +       G  R+ +GVQS+ E   R   R H 
Sbjct: 206 AVKYSERSNVKCIGITIETRPDYCLNRHLTDMLNYGCTRLEIGVQSVFEDVARDTNRGHT 265

Query: 154 ASEAIAAIHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
                   +LA++    I   M  DL     ++ + Q++ E     ++ VD L +Y   +
Sbjct: 266 VKAVCETFNLAKDCGFKIVSHMMPDLPNVDLERDLQQFK-EFFENPAFRVDGLKIYPTLV 324

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDL 235
            +GT  Y++ + G     S +  VDL
Sbjct: 325 MRGTGLYELWRSGRYRSYSPSELVDL 350


>gi|309389817|gb|ADO77697.1| conserved hypothetical protein [Halanaerobium praevalens DSM 2228]
          Length = 318

 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
           NN+Q  + A       G+Q++  ++L+ + R H  +E I A+  A+ +   +   LI  L
Sbjct: 138 NNYQELQLA----FEFGLQTVNYKTLKQVNRQHGLAEFIDAVLTAKKLEIEVGTHLILNL 193

Query: 180 PKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           P  T     +E  R LS   VDH+ L+ L I + ++F + +K G+L + S
Sbjct: 194 PNDTKEDV-IEGARILSALKVDHVKLHALYIRENSVFAEKYKKGELKICS 242


>gi|302658617|ref|XP_003021010.1| hypothetical protein TRV_04875 [Trichophyton verrucosum HKI 0517]
 gi|291184885|gb|EFE40392.1| hypothetical protein TRV_04875 [Trichophyton verrucosum HKI 0517]
          Length = 541

 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 199 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSK 258

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q       +  D L +Y   + +GT  Y++ + G
Sbjct: 259 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTG 318

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 319 RYKNYTPNALIDI 331


>gi|167541048|gb|ABZ82034.1| elongation protein 3 homolog [Clonorchis sinensis]
          Length = 387

 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  V ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +
Sbjct: 34  STTKCVGITIETRPDYCFKKHLGEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCES 93

Query: 161 IHLARNIFPRMSFDLI-YALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGT 213
            HL+++      F ++ + +P      WE +L +   Y        D L +Y   +  GT
Sbjct: 94  FHLSKD----AGFKVVAHMMPDLPNVGWERDLAQFAEYFENPAFRSDGLKIYPTLVICGT 149

Query: 214 LFYKMHKDGDLVLPSENVAVDL 235
             Y++ + G        + +DL
Sbjct: 150 GLYELWRSGRYRSYPSTMLIDL 171


>gi|328852453|gb|EGG01599.1| hypothetical protein MELLADRAFT_45092 [Melampsora larici-populina
           98AG31]
          Length = 538

 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           ++ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +  +A+
Sbjct: 205 IDITIETRPDYCLKPHLSSMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRATCESFQMAK 264

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q++   +   ++  D L +Y L + +GT  Y++ + 
Sbjct: 265 DAGFKVVSHMMPDLPNVGVERDIEQFKEYFENP-AFRSDGLKIYPLLVIRGTGVYELWRT 323

Query: 222 GDLVLPSENVAVDL 235
           G     + N  VD+
Sbjct: 324 GRYKNYTPNALVDI 337


>gi|302505753|ref|XP_003014583.1| hypothetical protein ARB_07145 [Arthroderma benhamiae CBS 112371]
 gi|291178404|gb|EFE34194.1| hypothetical protein ARB_07145 [Arthroderma benhamiae CBS 112371]
          Length = 541

 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 199 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSK 258

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + Q       +  D L +Y   + +GT  Y++ + G
Sbjct: 259 DAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTG 318

Query: 223 DLVLPSENVAVDL 235
                + N  +D+
Sbjct: 319 RYKNYTPNALIDI 331


>gi|313618589|gb|EFR90561.1| radical SAM protein, family [Listeria innocua FSL S4-378]
          Length = 321

 Score = 43.5 bits (101), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        Q
Sbjct: 154 IELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|110667752|ref|YP_657563.1| histone acetyltransferase-like protein [Haloquadratum walsbyi DSM
           16790]
 gi|109625499|emb|CAJ51926.1| histone acetyltransferase homolog [Haloquadratum walsbyi DSM 16790]
          Length = 569

 Score = 43.5 bits (101), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL--ILDGIAKNWTVS-S 104
           QE F++  L  M      + P   S   F        +P+++    + D IA+N T    
Sbjct: 181 QEWFLKRALEAMNDYDTDSKPDPASDQSFK------PDPEDVEFRYLEDVIAENETADIR 234

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    +I A    
Sbjct: 235 NIGTTFETKPDWCDPEQIDRMLDLGATKVEVGVQTTYERINREMHRGHGVQASIDANQRL 294

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++   P  T      + ++  +   Y  D+L +Y   + +GT  Y   + 
Sbjct: 295 RDAGFKVGFHMMPGQPGMTSKMIREDFRQLFNRTEYRPDYLKIYPTLVVRGTRVYDQWRR 354

Query: 222 GDL 224
            D 
Sbjct: 355 DDF 357


>gi|242793759|ref|XP_002482232.1| histone acetyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218718820|gb|EED18240.1| histone acetyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 570

 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 234 VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L + + Y        D L +Y   + +GT  Y++ 
Sbjct: 294 DAGFKVVSHMMPDLPNVGM---ERDLDQFVEYFENPAFRTDGLKIYPTLVIRGTGLYELW 350

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 351 RTGRYKNYTPNALIDI 366


>gi|212535698|ref|XP_002148005.1| histone acetyltransferase, putative [Penicillium marneffei ATCC
           18224]
 gi|210070404|gb|EEA24494.1| histone acetyltransferase, putative [Penicillium marneffei ATCC
           18224]
          Length = 570

 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 234 VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAK 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L + + Y        D L +Y   + +GT  Y++ 
Sbjct: 294 DAGFKVVSHMMPDLPNVGM---ERDLDQFVEYFENPAFRTDGLKIYPTLVIRGTGLYELW 350

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 351 RTGRYKNYTPNALIDI 366


>gi|15895026|ref|NP_348375.1| BioB/LipA-like protein [Clostridium acetobutylicum ATCC 824]
 gi|15024718|gb|AAK79715.1|AE007684_3 BioB/LipA-like protein [Clostridium acetobutylicum ATCC 824]
 gi|325509163|gb|ADZ20799.1| BioB/LipA-like protein [Clostridium acetobutylicum EA 2018]
          Length = 358

 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 4/211 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G+    + ++V    C   C +C+ N+          ++++S  T   ++  +    +  
Sbjct: 2   GKSHYIIPIFVPHEGCPHDCVFCNQNTITGEESKVNGDYVKS--TVEDYLDTIPNKSATI 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN 131
            I F GGT + I  +    +L  +A+++     ++ I +   P  ++       +   V+
Sbjct: 60  EISFFGGTFTAINIEKQKELL-SVARHYKEIGKIKYIRLSTRPDYIDDEILTNLKNYSVD 118

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LGVQSL+ + L   GR H   + + A  L +     +   ++  LP     +     
Sbjct: 119 IIELGVQSLDSEVLLKSGRGHTKEDVVKASRLIKKYGFTLGHQIMLGLPGDNAEKDIETT 178

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           ++ +    +   +Y   + K T   KM+  G
Sbjct: 179 RKVICMKPNICRIYPALVIKDTAMEKMYNRG 209


>gi|212711975|ref|ZP_03320103.1| hypothetical protein PROVALCAL_03051 [Providencia alcalifaciens DSM
           30120]
 gi|212685497|gb|EEB45025.1| hypothetical protein PROVALCAL_03051 [Providencia alcalifaciens DSM
           30120]
          Length = 300

 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V    ++   GYR+ G    + LG+Q+  +++L  + R H+ +   A  
Sbjct: 111 VGLCVGTRPDCVPDAVLSLLAGYRQQGYEIWLELGLQTAHDKTLHRINRGHDFAAYQATA 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR +  ++   LI  LP +  T     L   L+   D + L+ L I +G++  K  + 
Sbjct: 171 QKARALGLKVCTHLICGLPSENATMNMQTLDAVLACGTDGIKLHPLHIVEGSIMAKSWRA 230

Query: 222 GDLVLPSENVAVDLYNLT 239
           G L    E ++++ Y  T
Sbjct: 231 GRL----ETLSLEEYTAT 244


>gi|297526821|ref|YP_003668845.1| histone acetyltransferase, ELP3 family [Staphylothermus hellenicus
           DSM 12710]
 gi|297255737|gb|ADI31946.1| histone acetyltransferase, ELP3 family [Staphylothermus hellenicus
           DSM 12710]
          Length = 498

 Score = 43.5 bits (101), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/134 (20%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  R+ LGVQS+ +  L  + R H  +E+I +  + +
Sbjct: 164 VGLTIETRPDYGYEKHADEMLYYGATRVELGVQSIYDDVLLRVNRGHGVAESIKSTRILK 223

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + ++  LP     + ++E+ + +     +  D L +Y   + +GT+ Y+  ++
Sbjct: 224 DAGFKIVYHIMLGLPGSDPDR-DIEMMKEIFENPDFRPDMLKIYPTEVVEGTVLYQWWRE 282

Query: 222 GDLVLPSENVAVDL 235
           G      +  A+++
Sbjct: 283 GRYKPYDDETAIEV 296


>gi|260793507|ref|XP_002591753.1| hypothetical protein BRAFLDRAFT_123517 [Branchiostoma floridae]
 gi|229276963|gb|EEN47764.1| hypothetical protein BRAFLDRAFT_123517 [Branchiostoma floridae]
          Length = 550

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H+++
Sbjct: 220 IGITIETRPDYCLKRHLSSMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHMSK 279

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +EL    ++  D + +Y   + +GT  Y++ K 
Sbjct: 280 DAGFKVVCHMMPDLPNVGLERDIEQF-IELFENPAFRPDGMKIYPTLVIRGTGLYELWKT 338

Query: 222 GDLVLPSENVAVDL 235
           G       +  VDL
Sbjct: 339 GRYKSYPPSTLVDL 352


>gi|126466453|ref|YP_001041562.1| ELP3 family histone acetyltransferase [Staphylothermus marinus F1]
 gi|126015276|gb|ABN70654.1| histone acetyltransferase, ELP3 family [Staphylothermus marinus F1]
          Length = 465

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 48/250 (19%), Positives = 97/250 (38%), Gaps = 45/250 (18%)

Query: 15  GSNSLGVYVHWPFCVKKCPYC----DFNS------------HVRRYKVGQENFIQSFLTE 58
           G + + V  H   C   C YC     +N+              RR +      + + L +
Sbjct: 4   GVSVVAVMTHPIPCPFNCYYCPGGPQYNAPKSYFGNEPALRRARRNQFHPYKQVWNRLLQ 63

Query: 59  MQWMRQLTGPRSISSIFFGG---GTPSLIEPQNIALILDGI--------AKNWTVS---- 103
            ++++Q+  P  +  I  GG     P   +   I +I + +         + W +     
Sbjct: 64  YEYLKQI--PSKVEVIVMGGTFLAAPQRYKEWFITMIFEALNRYPDPNPPRKWDLELAQL 121

Query: 104 -------SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE 156
                    V +TIE  P      +       G  R+ LGVQS+ +  L  + R H  +E
Sbjct: 122 RNETARHRCVGLTIETRPDYGYEKHADEMLYYGATRVELGVQSIYDDVLLKVNRGHGVAE 181

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKG 212
            I +  + ++   ++ + ++  LP     + ++E+ + +     +  D L +Y   I +G
Sbjct: 182 TIKSTRILKDAGFKIVYHIMLGLPGSDPDR-DIEMMKEIFENPDFRPDMLKIYPTEIVEG 240

Query: 213 TLFYKMHKDG 222
           T+ Y+  ++G
Sbjct: 241 TVLYQWWREG 250


>gi|20094368|ref|NP_614215.1| Fe-S oxidoreductase family protein [Methanopyrus kandleri AV19]
 gi|38258812|sp|Q8TWU9|Y932_METKA RecName: Full=Uncharacterized protein MK0932
 gi|19887436|gb|AAM02145.1| Fe-S oxidoreductase family protein [Methanopyrus kandleri AV19]
          Length = 523

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM--- 189
           +S+GV++ + + LR +G+     EA+ AI L R    R     +Y LP QTM   ++   
Sbjct: 325 VSVGVETGDPRLLRAIGKPSTLKEALRAIRLLRRAGLRPHAYFVYGLPGQTMKSAKLTAK 384

Query: 190 ELQRALSYAVDHLSLYQL 207
            ++RA+    + +++Y+ 
Sbjct: 385 AMKRAVEMGAEKITVYRF 402


>gi|281201455|gb|EFA75665.1| elongation protein 3 [Polysphondylium pallidum PN500]
          Length = 559

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + ITIE  P     + + N   Y   G  R+ +GVQS+ E   R   R H     + +  
Sbjct: 228 IGITIETRPDHCLKLHLGNMLNY---GCTRLEIGVQSVFEDIARDTNRGHTVRAVLESFQ 284

Query: 163 LARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           LA++   ++   ++  LP   M +     ME     ++  D L +Y   + +GT  Y++ 
Sbjct: 285 LAKDSGFKVVAHMMPDLPNMGMERDVYGFMEFFENPAFRADGLKIYPTLVIRGTGLYELW 344

Query: 220 KDGDLVLPSENVAVDL 235
           K G     S +  VDL
Sbjct: 345 KTGTYKNYSPDSLVDL 360


>gi|260596160|ref|YP_003208731.1| hypothetical protein CTU_03680 [Cronobacter turicensis z3032]
 gi|260215337|emb|CBA27318.1| Uncharacterized protein yhcC [Cronobacter turicensis z3032]
          Length = 311

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV ++   GY + G    + LG+QS ++++L  + R H+ +        AR    ++ 
Sbjct: 123 PESV-LDLLSGYHQQGYEVWLELGLQSAKDKTLHRINRGHDFACYQDTARRARARGLKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI  LP +T     + L+R +   VD + L+ L I +G++  K  + G L      +A
Sbjct: 182 THLIVGLPGETRLDALVSLERVVETGVDGIKLHPLHIVEGSIMAKAWRAGRL----SGIA 237

Query: 233 VDLYNLT 239
           ++ Y +T
Sbjct: 238 LEDYAVT 244


>gi|237752934|ref|ZP_04583414.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375201|gb|EEO25292.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 317

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 49/103 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+ +++L+F+ R H        I  ++    +    +IY LP +T       L+
Sbjct: 162 VEYGIQSVYDETLKFINRGHGTENMEFCITESKKRGLKTCSHIIYGLPNETKEMMLYSLK 221

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             L +  D + ++ L I + TL   M++ G+    + N  +DL
Sbjct: 222 TVLDWGSDGIKVHPLYIIEKTLLANMYEKGEYKPITLNDYIDL 264


>gi|110803935|ref|YP_699004.1| radical SAM domain-containing protein [Clostridium perfringens
           SM101]
 gi|110684436|gb|ABG87806.1| radical SAM domain protein [Clostridium perfringens SM101]
          Length = 357

 Score = 43.5 bits (101), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 4/174 (2%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-I 108
           NF++  + E  ++  +     I  + F GGT + I+      +L  +AK +     ++ I
Sbjct: 51  NFVRKTIEE--YIETIGEGDRILEVSFFGGTFTAIDINKQRELL-AVAKEYKDKKIIDYI 107

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
            +   P  ++       +   V+ I LGVQSL+++ L   GR H   E + A  L +   
Sbjct: 108 RLSTRPDYIDEFILDHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYG 167

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             +   ++  LP+ T  +     + ++    D   +Y   I K T    M+ +G
Sbjct: 168 FTLGHQIMVGLPEDTFEKDIETTRESIKMKPDICRIYPALIVKNTPMEDMYLEG 221


>gi|312793341|ref|YP_004026264.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180481|gb|ADQ40651.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 341

 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++    +  +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDEERLRLLKLYNVKTIELGIQSMFDDVLNACARGHTAQHSKNAMEMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +   ++  LPK T  + ++E  + L S++ D   +Y   + +GT   KM++ G+   
Sbjct: 148 GFLLGVQVMVGLPKST-PEKDIETAKILTSFSPDIARIYPTLVIEGTYLAKMYQKGEYEP 206

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
            S   AV   +  +SI   +G++   I      G +    +NY
Sbjct: 207 LSLYEAVVRCSQIKSIFIENGVNVIRI------GLQPTEEINY 243


>gi|39995383|ref|NP_951334.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39982145|gb|AAR33607.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
          Length = 589

 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 128 AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           AG+   + +G+QS + + LR + R+ +  +    I L         FDLIY LP  ++  
Sbjct: 242 AGITCSLQIGLQSADPKILRRIRRHLDPDDFRERIGLLNESGAIFGFDLIYGLPGDSLAA 301

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +   L  AL    +HL ++ L I  GT+         L    E++    Y LT S T
Sbjct: 302 FRRSLDFALELYPNHLDIFPLAILPGTILANRASSEGL----EHLTAPPYTLTGSPT 354


>gi|291165575|gb|EFE27624.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
          Length = 373

 Score = 43.1 bits (100), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRI 133
           FFGG   ++ + + + L+   +A  + +S  V+ + I   P +++    +  ++ GV  I
Sbjct: 66  FFGGSFTAISDARRVELL--QLAHQYILSGEVKSVRISTRPDAIDEMILEELQQYGVQVI 123

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            LGVQSL+E+ L+   R H+A+    +  L +    ++   ++  LP
Sbjct: 124 ELGVQSLDERVLQESNRGHDAACVYRSAKLIQEYGFQLGLQMMIGLP 170


>gi|323498037|ref|ZP_08103045.1| putative Fe-S oxidoreductase [Vibrio sinaloensis DSM 21326]
 gi|323316913|gb|EGA69916.1| putative Fe-S oxidoreductase [Vibrio sinaloensis DSM 21326]
          Length = 314

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 122 FQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             GY K G    + LG+Q+  + +L+ + R H+ +        AR +  ++   LI  LP
Sbjct: 130 LSGYVKQGFEIWLELGLQTANDDTLKRINRGHDFACYAQITQRARALGIKVCTHLIVGLP 189

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAV 233
           K++ T     L + L    D + L+ L I +G+   K  K G L  P   E VA+
Sbjct: 190 KESRTDNIDTLTKVLEVGTDGIKLHGLHIVEGSTMAKAWKAGRLQAPELEEYVAI 244


>gi|298504385|gb|ADI83108.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter sulfurreducens KN400]
          Length = 626

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 128 AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           AG+   + +G+QS + + LR + R+ +  +    I L         FDLIY LP  ++  
Sbjct: 279 AGITCSLQIGLQSADPKILRRIRRHLDPDDFRERIGLLNESGAIFGFDLIYGLPGDSLAA 338

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +   L  AL    +HL ++ L I  GT+         L    E++    Y LT S T
Sbjct: 339 FRRSLDFALELYPNHLDIFPLAILPGTILANRASSEGL----EHLTAPPYTLTGSPT 391


>gi|150021064|ref|YP_001306418.1| radical SAM domain-containing protein [Thermosipho melanesiensis
           BI429]
 gi|149793585|gb|ABR31033.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
          Length = 314

 Score = 43.1 bits (100), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 8/205 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+ I I   P  +   N    +K  V  I +G+QS+ +  L    R H   + I AI L 
Sbjct: 74  NLPIRISTRPDEITEENLHILKKYNVKTIEIGIQSMFDDILSASNRGHTKKDNINAILLL 133

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +     +S  L+  LPK T  +    L   ++  V+   ++   + K T   K++ +   
Sbjct: 134 QKFNFEISAHLMVGLPKDTKEKSLKTLNELINLNVNIFRIHPTLVFKNTKLEKLYLNNQY 193

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL----NYWRYGDYIGIGP 280
              +   AVD+   ++ +   +  +A  I    F+  +SL N+    ++  +GD +    
Sbjct: 194 KPLTLEEAVDI--TSEMLLLIYANNAKAIRLGYFVPKQSLKNIVAGPHHPSFGDMVKTNV 251

Query: 281 GAHSRVKVGSHRVAISIEKHPESWL 305
                 ++   +V     K  ESW 
Sbjct: 252 AKKIITRLNIKKVYYP--KKYESWF 274


>gi|295674663|ref|XP_002797877.1| elongator complex protein [Paracoccidioides brasiliensis Pb01]
 gi|226280527|gb|EEH36093.1| elongator complex protein [Paracoccidioides brasiliensis Pb01]
          Length = 583

 Score = 43.1 bits (100), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H     +    L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVVETFKLSK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L +   Y        D L +Y   + +GT  Y++ 
Sbjct: 298 DAGFKVVSHMMPDLPNVGM---ERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELW 354

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  VD+
Sbjct: 355 RTGRYKNYTPNALVDI 370


>gi|227824521|ref|ZP_03989353.1| radical SAM family protein [Acidaminococcus sp. D21]
 gi|226905020|gb|EEH90938.1| radical SAM family protein [Acidaminococcus sp. D21]
          Length = 332

 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 10/207 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V +  C  +C +C+          G E+      T   W+R+          F+GG
Sbjct: 3   IPLFVSFKGCPHRCLFCNQPIINGTAYHGVEDVKSQLRTLAGWVRK---DHRNELAFYGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
              +L   +  AL L+ +          ++ +   P ++   +    R  GV  + LGVQ
Sbjct: 60  SFTALPLAEQEAL-LELVMPYRKAGYFTDLRLSTRPDAISPASLSLLRDYGVRTVELGVQ 118

Query: 139 SLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           SL++ +L  L R H+A    EA A +  A      +   L+  LP +T    +  L+   
Sbjct: 119 SLDDVTLTLLDRGHDAHCVYEATAQLQAAGFA---VIHQLMVNLPGETEETLKKTLRGVT 175

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   +   +Y L + +GT     ++ G
Sbjct: 176 AMHPEGCRIYPLLVIEGTKLADWYRKG 202


>gi|242007698|ref|XP_002424664.1| elongator complex protein, putative [Pediculus humanus corporis]
 gi|212508157|gb|EEB11926.1| elongator complex protein, putative [Pediculus humanus corporis]
          Length = 532

 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       + +LA+
Sbjct: 202 IGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFNLAK 261

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 262 DAGFKVVAHMMPDLPNVDLERDLEQF-IEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 320

Query: 222 GDLVLPSENVAVDL 235
           G       N  VDL
Sbjct: 321 GRYKSYPPNTLVDL 334


>gi|71655565|ref|XP_816344.1| histone acethyltransferase-like protein [Trypanosoma cruzi strain
           CL Brener]
 gi|70881465|gb|EAN94493.1| histone acethyltransferase-like protein, putative [Trypanosoma
           cruzi]
          Length = 678

 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 38/78 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++     Q  R+ G  R+ LGVQ  ++  L  + R     EA+ AI L +
Sbjct: 273 IGVTLETRPDTINEEMLQQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTREEAVRAIKLLK 332

Query: 166 NIFPRMSFDLIYALPKQT 183
           +   ++   L+  LP  T
Sbjct: 333 DSCFKVDIHLMPDLPGST 350


>gi|226290627|gb|EEH46111.1| elongator complex protein [Paracoccidioides brasiliensis Pb18]
          Length = 583

 Score = 43.1 bits (100), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H     +    L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVVETFKLSK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L +   Y        D L +Y   + +GT  Y++ 
Sbjct: 298 DAGFKVVSHMMPDLPNVGM---ERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELW 354

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  VD+
Sbjct: 355 RTGRYKNYTPNALVDI 370


>gi|324509273|gb|ADY43904.1| Elongator complex protein 3 [Ascaris suum]
          Length = 549

 Score = 43.1 bits (100), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +G+QS  E       R H  S    A  +A+
Sbjct: 218 IGITIETRPDYCMPRHLDEMLSYGCTRLEIGLQSTYEDVALHTNRGHTVSSVCEAFQMAK 277

Query: 166 NIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP  T+    Q   EL    ++  D L +Y   + +GT  Y++ + G
Sbjct: 278 DAGFKVVIHMMPNLPNVTVERDLQQFKELFENPAFQPDGLKIYPTLVIRGTGLYELWRTG 337

Query: 223 DLVLPSENVAVDL 235
                   V VDL
Sbjct: 338 KYKSYPPEVLVDL 350


>gi|42523462|ref|NP_968842.1| putative Fe-S oxidoreductase [Bdellovibrio bacteriovorus HD100]
 gi|39575668|emb|CAE79835.1| putative Fe-S oxidoreductase [Bdellovibrio bacteriovorus HD100]
          Length = 348

 Score = 43.1 bits (100), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALP 180
           +Q Y +     + LGVQS     L F+ R H A ++IAAI+ +A +    +   LI+  P
Sbjct: 150 WQEYHEKSFVAVELGVQSFYNDQLEFMRRGHTAEDSIAAINKIASSTTVDLGIHLIFGSP 209

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            +T  Q     +      + ++ L+ L + K T   +M+  G+ +
Sbjct: 210 TETDEQIIETAKICNDLPITNVKLHNLHVLKNTPLEEMYHKGEFL 254


>gi|291385839|ref|XP_002709495.1| PREDICTED: elongation protein 3 homolog [Oryctolagus cuniculus]
          Length = 547

 Score = 43.1 bits (100), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +++  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +
Sbjct: 211 SLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCES 270

Query: 161 IHLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            HLA++    +   M  DL     ++ + Q+  E     ++  D L LY   + +GT  Y
Sbjct: 271 FHLAKDSGFKVVAHMMPDLPNVGLERDIEQF-TEFFENPAFRPDGLKLYPTLVIRGTGLY 329

Query: 217 KMHKDG 222
           ++ + G
Sbjct: 330 ELWQSG 335


>gi|323979072|gb|EGB74150.1| SAM protein [Escherichia coli TW10509]
          Length = 320

 Score = 43.1 bits (100), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + +D Y +T
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELDDYTVT 255


>gi|225678323|gb|EEH16607.1| histone acetyltransferase [Paracoccidioides brasiliensis Pb03]
          Length = 583

 Score = 43.1 bits (100), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H     +    L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVVETFKLSK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L +   Y        D L +Y   + +GT  Y++ 
Sbjct: 298 DAGFKVVSHMMPDLPNVGM---ERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELW 354

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  VD+
Sbjct: 355 RTGRYKNYTPNALVDI 370


>gi|167535111|ref|XP_001749230.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772383|gb|EDQ86036.1| predicted protein [Monosiga brevicollis MX1]
          Length = 551

 Score = 43.1 bits (100), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H A+
Sbjct: 204 IGITIETRPDYCLRPHLNSMLEYGCTRLEIGVQSVFEDVARDTNRGHTVKAVSESFHGAK 263

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D L LY   + +GT  Y++ K 
Sbjct: 264 DTGFKVVAHMMPDLPNMGLERDVAQF-VEFFENPAFRADGLKLYPTLVIRGTGLYELWKT 322

Query: 222 GDLVLPSENVAVDL 235
           G       +V VDL
Sbjct: 323 GRYKSYPPSVLVDL 336


>gi|150402663|ref|YP_001329957.1| radical SAM family protein [Methanococcus maripaludis C7]
 gi|150033693|gb|ABR65806.1| conserved hypothetical radical SAM protein [Methanococcus
           maripaludis C7]
          Length = 332

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 13/157 (8%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           ++F  GT +   P+ +  + D      +    + I+I   P  +E   ++  + Y K G 
Sbjct: 110 VYFYPGTNTHGTPEKLKELWDFAL---SFEDVIGISIGTRPDCLEDEKLDILENYVKQGY 166

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE- 188
              I LGVQ++ +++L FL R H++ +   A+   +     +   +I ALP +    W+ 
Sbjct: 167 EIWIDLGVQTMHDKTLDFLNRKHSSDDIRRAVIECKKRGILVCGHIILALPNEN---WDM 223

Query: 189 -MELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            ME  + LS   +D L +Y L + + T   K++  G+
Sbjct: 224 MMETAKVLSDLEIDALKIYPLVVIENTELEKIYWKGE 260


>gi|291333585|gb|ADD93279.1| RNA polymerase II complex ELP3 subunit [uncultured archaeon
           MedDCM-OCT-S08-C92]
          Length = 430

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P   AL ++G AK+  V+    +TIE  P+     +    RK G  R+ +GVQ L+++  
Sbjct: 175 PLEEALQVNGDAKHKCVA----LTIETRPTECTPWSVFQMRKQGATRVEIGVQCLDDEVH 230

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHL 202
             L R     + + A  L +    ++ + L+  LP     +   + +R      +  D L
Sbjct: 231 GKLNRKQLVEDVVKATKLLKEAGLKVVYHLMPGLPGMNPEKDLRDFKRLFEEEEFQPDML 290

Query: 203 SLYQLTIEKGTLFYKMHKDGDLV 225
            LY   + KG+   +    GD V
Sbjct: 291 KLYPTLLVKGSALAR--DPGDFV 311


>gi|325183062|emb|CCA17517.1| histone acetyltransferase gcn5type hat putative [Albugo laibachii
           Nc14]
          Length = 541

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 3/118 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P     ++       G  RI +GVQS+ E   R   R H  +    +  LA++ 
Sbjct: 213 ITIETRPDYCLKSHLNDMLSYGCTRIEIGVQSVYEDVARDTNRGHTVAAVCHSFQLAKDC 272

Query: 168 FPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             ++   L+  LP   + +  +   E     ++  D L +Y   + +GT  Y++ K G
Sbjct: 273 GYKIVAHLMPDLPNMGLERDILGFKEFFENPAFRTDGLKIYPTLVIRGTGLYEIWKTG 330


>gi|238918556|ref|YP_002932070.1| hypothetical protein NT01EI_0606 [Edwardsiella ictaluri 93-146]
 gi|238868124|gb|ACR67835.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 301

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV ++    YR+ G    + LG+QS  E++LR + R H+ +        AR    ++ 
Sbjct: 123 PESV-LDLLAEYREQGYEVWLELGLQSASEKTLRRINRGHDFACYQRTTRAARARGLKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI  LP +T       LQR +   V+ + L+ L I  G++  K  + G L    + + 
Sbjct: 182 SHLIVGLPGETQADCLSTLQRVVETGVEGIKLHPLHIVTGSVLAKAWQAGRL----QGLT 237

Query: 233 VDLY 236
           +D Y
Sbjct: 238 LDRY 241


>gi|328779703|ref|XP_003249694.1| PREDICTED: probable elongator complex protein 3-like [Apis
           mellifera]
          Length = 551

 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +  L++
Sbjct: 217 IGITIETRPDYCLKKHLSDMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLSK 276

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 277 DAGFKVIAHMMPDLPNVDIERDVNQF-IEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 335

Query: 222 GDLVLPSENVAVDL 235
           G       +V VDL
Sbjct: 336 GRYKSYPPSVLVDL 349


>gi|71003460|ref|XP_756406.1| hypothetical protein UM00259.1 [Ustilago maydis 521]
 gi|46095784|gb|EAK81017.1| hypothetical protein UM00259.1 [Ustilago maydis 521]
          Length = 566

 Score = 43.1 bits (100), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 5/138 (3%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           ++  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H         
Sbjct: 208 LTKCIGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETF 267

Query: 162 HLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            LA++    I   M  DL     ++ M Q++   +   ++  D L LY   + +GT  Y+
Sbjct: 268 QLAKDAGYKIVAHMMPDLPNVGVERDMEQFKEYFENP-AFRTDGLKLYPTLVIRGTGLYE 326

Query: 218 MHKDGDLVLPSENVAVDL 235
           + + G     + +  VDL
Sbjct: 327 LWRTGRYKNYTPSFLVDL 344


>gi|269798054|ref|YP_003311954.1| hypothetical protein Vpar_0993 [Veillonella parvula DSM 2008]
 gi|269094683|gb|ACZ24674.1| conserved hypothetical protein [Veillonella parvula DSM 2008]
          Length = 321

 Score = 43.1 bits (100), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++  ++L  + R H+ +E I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYETLEKINRGHDLAEFIDAVLRIKRYGFNITTHMIVNLPWDTMKD-TIEGA 207

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R LS   VD + L+ L I K TL  K +++G   L S
Sbjct: 208 RILSALGVDQVKLHALYIVKNTLMAKWYQEGQFTLIS 244


>gi|218550494|ref|YP_002384285.1| Fe-S oxidoreductase [Escherichia fergusonii ATCC 35469]
 gi|218358035|emb|CAQ90681.1| putative Fe-S oxidoreductase [Escherichia fergusonii ATCC 35469]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 45/92 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  T+    L 
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLA 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           R +   VD + L+ L I KG++  K  + G L
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL 233


>gi|325498792|gb|EGC96651.1| Fe-S oxidoreductase [Escherichia fergusonii ECD227]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 45/92 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  T+    L 
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLA 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           R +   VD + L+ L I KG++  K  + G L
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL 233


>gi|323507789|emb|CBQ67660.1| probable ELP3-subunit of elongator/RNAPII holoenzyme with histone
           [Sporisorium reilianum]
          Length = 566

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 5/138 (3%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           ++  + ITIE  P      +     + G  R+ +GVQS+ E   R   R H         
Sbjct: 208 LTKCIGITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETF 267

Query: 162 HLARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            LA++    I   M  DL     ++ M Q++   +   ++  D L LY   + +GT  Y+
Sbjct: 268 QLAKDAGYKIVAHMMPDLPNVGVERDMEQFKEYFENP-AFRTDGLKLYPTLVIRGTGLYE 326

Query: 218 MHKDGDLVLPSENVAVDL 235
           + + G     + +  VDL
Sbjct: 327 LWRTGRYKNYTPSFLVDL 344


>gi|318604059|emb|CBY25557.1| putative Fe-S oxidoreductase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 7/167 (4%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++ +  +A+   V   V    +  P +V ++   GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKHINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEEQAQCMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G++  K  + G L      +A++ Y LT
Sbjct: 202 KVVATGVDGIKLHPLHIVEGSIMAKAWRAGRL----PELALEDYVLT 244


>gi|88797931|ref|ZP_01113518.1| hypothetical protein MED297_00805 [Reinekea sp. MED297]
 gi|88779128|gb|EAR10316.1| hypothetical protein MED297_00805 [Reinekea sp. MED297]
          Length = 310

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 47/102 (46%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++L  + R H  ++   A+  AR +  ++   LI  LP ++        Q
Sbjct: 145 LELGLQSAHDETLALINRGHTMADYRDAVTRARQLGLKVCTHLIVGLPGESKIHVLDSWQ 204

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + L   VD +  + L + KGT   +    GD +   +   VD
Sbjct: 205 QVLDAGVDGVKWHPLHVVKGTQLARQLTQGDYICIGQGEYVD 246


>gi|156379464|ref|XP_001631477.1| predicted protein [Nematostella vectensis]
 gi|156218518|gb|EDO39414.1| predicted protein [Nematostella vectensis]
          Length = 549

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H ++
Sbjct: 218 IGITIETRPDYCLKKHLSSMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHQSK 277

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 278 DAGFKVVSHMMPDLPNVGLERDIDQF-IEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDL 235
           G       N  VDL
Sbjct: 337 GRYKSYPPNTLVDL 350


>gi|170725584|ref|YP_001759610.1| putative radical SAM protein [Shewanella woodyi ATCC 51908]
 gi|169810931|gb|ACA85515.1| conserved hypothetical radical SAM protein [Shewanella woodyi ATCC
           51908]
          Length = 312

 Score = 42.7 bits (99), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V    +    GY+  G++  + LG+QS  +++L+ + R H  ++ +  +
Sbjct: 112 VGLCVGTRPDCVSDDVIELLAGYQARGIDVWLELGLQSASDKTLKRINRGHTLADYLDTV 171

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             AR    ++   LI  LP +    +   L   L   VD L L+ L I +G+   K
Sbjct: 172 TRARAKGIKVCTHLILGLPGEEHQDYLNSLHAVLQAGVDGLKLHPLHIVEGSTMAK 227


>gi|328472025|gb|EGF42902.1| putative Fe-S oxidoreductase [Vibrio parahaemolyticus 10329]
          Length = 319

 Score = 42.7 bits (99), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR++  ++   LI  LPK+T       LQ
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITQRARSLGIKVCTHLIVGLPKETRDDNIETLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 202 KVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPELEEYVAI 244


>gi|322826311|gb|EFZ30987.1| histone acethyltransferase-like protein, putative [Trypanosoma
           cruzi]
          Length = 678

 Score = 42.7 bits (99), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 38/78 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++     Q  R+ G  R+ LGVQ  ++  L  + R     EA+ AI L +
Sbjct: 273 IGVTLETRPDTINEEMLQQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTREEAVHAIKLLK 332

Query: 166 NIFPRMSFDLIYALPKQT 183
           +   ++   L+  LP  T
Sbjct: 333 DSCFKVDIHLMPDLPGST 350


>gi|282882370|ref|ZP_06290998.1| radical SAM domain protein [Peptoniphilus lacrimalis 315-B]
 gi|281297791|gb|EFA90259.1| radical SAM domain protein [Peptoniphilus lacrimalis 315-B]
          Length = 351

 Score = 42.7 bits (99), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 36/176 (20%), Positives = 78/176 (44%), Gaps = 15/176 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISS 73
           N + ++V    C   C +C+     ++   G    I S + E   ++++       ++  
Sbjct: 5   NIIPIFVPHLGCPLDCCFCN-----QKKITGVSTDISSDIVEKTILEYLSYFKRKDNVEV 59

Query: 74  IFFGGGTPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            F+GG   ++   +NI   L  +A   KN  + +N+ ++    P  ++ +     +K GV
Sbjct: 60  AFYGGSFTAI--DKNIQSELLSVAFKYKNKGLVNNIRLS--TRPDCIDTDTLDNLKKFGV 115

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           + I LGVQSL++  L    R H++     +  L ++   ++    +  LP  + ++
Sbjct: 116 DIIELGVQSLDDGVLILSNRGHDSKCVQKSSKLIKDYGFKLGLQQMIGLPGDSFSK 171


>gi|238751335|ref|ZP_04612828.1| hypothetical protein yrohd0001_15200 [Yersinia rohdei ATCC 43380]
 gi|238710393|gb|EEQ02618.1| hypothetical protein yrohd0001_15200 [Yersinia rohdei ATCC 43380]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 10/197 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-FFGGGTPSLIEPQNIA 90
           C +C   S         EN  Q  + E    +     R+   + +F   T +  E   +A
Sbjct: 45  CTFCQVAS------FADENMQQQSIAEQLAAQAKKANRANRYLAYFQAYTSTYAEVNALA 98

Query: 91  LILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFL 148
            + +  +A+   V   V    +  P +V ++   GY + G    + LG+Q+  +++L+ +
Sbjct: 99  AMYEQALAEADIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVWLELGLQTANDKTLKRI 157

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +        AR    ++   LI  LP + M Q    L++ ++  VD L L+ L 
Sbjct: 158 NRGHDFACYQQTARRARARGLKVCCHLIVGLPGEGMEQGMETLEKVVATGVDGLKLHPLH 217

Query: 209 IEKGTLFYKMHKDGDLV 225
           I +G+   K  + G L 
Sbjct: 218 IVEGSTMAKAWRAGRLA 234


>gi|206577866|ref|YP_002236375.1| radical SAM protein, TIGR01212 family [Klebsiella pneumoniae 342]
 gi|290511590|ref|ZP_06550959.1| radical SAM protein [Klebsiella sp. 1_1_55]
 gi|206566924|gb|ACI08700.1| radical SAM protein, TIGR01212 family [Klebsiella pneumoniae 342]
 gi|289776583|gb|EFD84582.1| radical SAM protein [Klebsiella sp. 1_1_55]
          Length = 311

 Score = 42.7 bits (99), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +T       L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTARLARARGLKVCAHLIVGLPGETQGHCLETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R ++  VD + L+ L I KG++  K  + G L      + ++ Y +T
Sbjct: 202 RVVATGVDGIKLHPLHIVKGSIMAKAWQAGRL----NGIELEAYTVT 244


>gi|254285969|ref|ZP_04960930.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423879|gb|EDN15819.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 316

 Score = 42.7 bits (99), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R HN +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHNFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|296415161|ref|XP_002837260.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633121|emb|CAZ81451.1| unnamed protein product [Tuber melanosporum]
          Length = 571

 Score = 42.7 bits (99), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          LA+
Sbjct: 233 VGITIETRPDYCLDQHLSSMLRYGCTRLEVGVQSLYEDVARDTNRGHTVKAVCETFKLAK 292

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+    +    +  D L +Y   + +GT  Y++ + 
Sbjct: 293 DSGYKVVSHMMPDLPNVGMERDLDQFREYFENP-DFRTDGLKIYPTLVIRGTGLYELWRT 351

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +DL
Sbjct: 352 GRYKNYTPNALIDL 365


>gi|257075665|ref|ZP_05570026.1| radical SAM superfamily protein [Ferroplasma acidarmanus fer1]
          Length = 515

 Score = 42.7 bits (99), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  ++ LG+Q L ++ LR   R H   E + +  LAR
Sbjct: 189 VGMTIETKPDWFNEREIDEALSYGTTKVELGIQVLNDRILRLNRRGHGVEEIVRSTQLAR 248

Query: 166 NIFPRMSFDLIYAL----PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + L+  +     K+ +  ++M +     +  D L +Y   + K T  YK  K+
Sbjct: 249 DAGLKVLYHLMPGMYGSSYKEDIKSFDMVMGDE-RFRPDMLKIYPTLVVKNTALYKYWKE 307

Query: 222 GDLV 225
           G  +
Sbjct: 308 GKYI 311


>gi|313673278|ref|YP_004051389.1| hypothetical protein Calni_1318 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940034|gb|ADR19226.1| conserved hypothetical protein [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 42/78 (53%)

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L+F+ R H+  +   A+ L ++   +++  LI  LP +T ++     +   
Sbjct: 140 GLQSAHDKTLKFINRGHSVDDFEKAVLLTKSFGLKITTHLILGLPYETKSEMIDSTKYVA 199

Query: 196 SYAVDHLSLYQLTIEKGT 213
           S  +D +  + L I KGT
Sbjct: 200 SLGIDAVKFHHLHIVKGT 217


>gi|167631057|ref|YP_001681556.1| radical sam family protein [Heliobacterium modesticaldum Ice1]
 gi|167593797|gb|ABZ85545.1| radical sam family protein [Heliobacterium modesticaldum Ice1]
          Length = 323

 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS+ + +LR + R H+A+   AA+   R    R+   +IY LP +   +  +E  
Sbjct: 155 VELGLQSIHDDTLRRINRGHDAATFYAALEKLRARGIRVCVHIIYGLPGEG-EEAMLETG 213

Query: 193 RAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           RA+ +  V  +  + L + KGT   + H  G + L
Sbjct: 214 RAVAAMDVQGVKFHSLHVMKGTRLAEWHAAGQVPL 248


>gi|110807076|ref|YP_690596.1| hypothetical protein SFV_3241 [Shigella flexneri 5 str. 8401]
 gi|110616624|gb|ABF05291.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 301

 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 134 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 193

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +  +VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 194 RVVETSVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 236


>gi|30064548|ref|NP_838719.1| hypothetical protein S3469 [Shigella flexneri 2a str. 2457T]
 gi|56480288|ref|NP_709009.2| hypothetical protein SF3251 [Shigella flexneri 2a str. 301]
 gi|30042807|gb|AAP18530.1| hypothetical protein S3469 [Shigella flexneri 2a str. 2457T]
 gi|56383839|gb|AAN44716.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|281602593|gb|ADA75577.1| putative Fe-S oxidoreductase [Shigella flexneri 2002017]
 gi|313648545|gb|EFS12987.1| radical SAM superfamily protein [Shigella flexneri 2a str. 2457T]
 gi|332752898|gb|EGJ83283.1| radical SAM superfamily protein [Shigella flexneri K-671]
 gi|332754303|gb|EGJ84669.1| radical SAM superfamily protein [Shigella flexneri 2747-71]
 gi|332765210|gb|EGJ95437.1| radical SAM superfamily protein [Shigella flexneri 2930-71]
 gi|332998334|gb|EGK17933.1| radical SAM superfamily protein [Shigella flexneri VA-6]
 gi|333014621|gb|EGK33968.1| radical SAM superfamily protein [Shigella flexneri K-304]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +  +VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETSVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|320174577|gb|EFW49713.1| hypothetical protein SDB_02919 [Shigella dysenteriae CDC 74-1112]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWETGRL----NGIELEDYTLT 244


>gi|320588123|gb|EFX00598.1| elongator complex protein 3 [Grosmannia clavigera kw1407]
          Length = 539

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 199 VGITIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAK 258

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 259 DAGYKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 318

Query: 223 DLVLPSENVAVDL 235
                + N  VDL
Sbjct: 319 RYQNYTPNGLVDL 331


>gi|257063537|ref|YP_003143209.1| histone acetyltransferase [Slackia heliotrinireducens DSM 20476]
 gi|256791190|gb|ACV21860.1| histone acetyltransferase [Slackia heliotrinireducens DSM 20476]
          Length = 598

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P ++   + +  R+ G  +I +G+QSL+   LR   R  +A++   A  L R
Sbjct: 270 VGLVVETRPDTITPESLRLIRRMGATKIQMGIQSLDGDILRKNLRVSSATDTRHAFELVR 329

Query: 166 ----NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                I   +  +L  + P+Q   ++ +   R  +Y  D + LY   +  GT   K + +
Sbjct: 330 LYGFKIHAHIMVNLYGSSPEQDKHEY-LAFTRDEAYKPDEVKLYPCMLVDGTGLKKHYLN 388

Query: 222 GDLVLPSENVAVDL 235
           G     S+   +D+
Sbjct: 389 GSWAPYSDEELLDV 402


>gi|225027657|ref|ZP_03716849.1| hypothetical protein EUBHAL_01916 [Eubacterium hallii DSM 3353]
 gi|224954971|gb|EEG36180.1| hypothetical protein EUBHAL_01916 [Eubacterium hallii DSM 3353]
          Length = 315

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVE---VNNFQGYR-KAGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           VEI++   P  +    +  FQ +R + G+   I LG+Q++   +L  + R H  +E I A
Sbjct: 111 VEISLSTRPDCIRQDYLEAFQNFRERTGIEVSIELGLQTVNYHTLSAMNRGHGLAEFINA 170

Query: 161 IHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKM 218
           + L A   FP +   +I  LP  TM     E  R LS   V  + L+ L I K    YK 
Sbjct: 171 VLLIAPYHFP-VCVHMILNLPGDTMED-ARESARVLSALPVSMVKLHSLYIPKECALYKE 228

Query: 219 HKDGDLVLPSENVAVD 234
           ++ G++ + S+   ++
Sbjct: 229 YEAGNIQICSKQEYIE 244


>gi|156389247|ref|XP_001634903.1| predicted protein [Nematostella vectensis]
 gi|156221991|gb|EDO42840.1| predicted protein [Nematostella vectensis]
          Length = 527

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H ++
Sbjct: 200 IGITIETRPDYCLKKHLSSMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHQSK 259

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 260 DAGFKVVSHMMPDLPNVGLERDIDQF-IEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 318

Query: 222 GDLVLPSENVAVDL 235
           G       N  VDL
Sbjct: 319 GRYKSYPPNTLVDL 332


>gi|323173529|gb|EFZ59158.1| radical SAM superfamily protein [Escherichia coli LT-68]
          Length = 288

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 121 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 181 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 223


>gi|238796207|ref|ZP_04639717.1| hypothetical protein ymoll0001_34650 [Yersinia mollaretii ATCC
           43969]
 gi|238719900|gb|EEQ11706.1| hypothetical protein ymoll0001_34650 [Yersinia mollaretii ATCC
           43969]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++    +A+   V   V    +  P +V ++   GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYQQALAETDIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +     +  AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTVRRARARGLKVCCHLIVGLPGEDRAQGMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + ++  VD L L+ L I +G+   K  + G L
Sbjct: 202 KVVATGVDGLKLHPLHIVEGSTMAKAWRAGRL 233


>gi|26249797|ref|NP_755837.1| hypothetical protein c3971 [Escherichia coli CFT073]
 gi|26110225|gb|AAN82411.1|AE016767_171 Hypothetical protein yhcC [Escherichia coli CFT073]
          Length = 288

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 121 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 181 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 223


>gi|309703637|emb|CBJ02977.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
 gi|332086331|gb|EGI91483.1| radical SAM superfamily protein [Shigella boydii 5216-82]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|300929907|ref|ZP_07145349.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 187-1]
 gi|300462193|gb|EFK25686.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 187-1]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|300990941|ref|ZP_07179393.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 45-1]
 gi|300407017|gb|EFJ90555.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 45-1]
          Length = 309

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|288933359|ref|YP_003437418.1| hypothetical protein Kvar_0476 [Klebsiella variicola At-22]
 gi|288888088|gb|ADC56406.1| conserved hypothetical protein [Klebsiella variicola At-22]
          Length = 319

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +T       L+
Sbjct: 150 LELGLQTAHDKTLHRINRGHDFACYQRTARLARARGLKVCAHLIVGLPGETQGHCLETLE 209

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R ++  VD + L+ L I KG++  K  + G L      + ++ Y +T
Sbjct: 210 RVVATGVDGIKLHPLHIVKGSIMAKAWQAGRL----NGIELEAYTVT 252


>gi|91212636|ref|YP_542622.1| hypothetical protein UTI89_C3647 [Escherichia coli UTI89]
 gi|91074210|gb|ABE09091.1| hypothetical protein UTI89_C3647 [Escherichia coli UTI89]
          Length = 288

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 121 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 181 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 223


>gi|323154426|gb|EFZ40627.1| radical SAM superfamily protein [Escherichia coli EPECa14]
          Length = 288

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 121 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 181 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 223


>gi|323183165|gb|EFZ68563.1| radical SAM superfamily protein [Escherichia coli 1357]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|110643452|ref|YP_671182.1| hypothetical protein ECP_3299 [Escherichia coli 536]
 gi|191174418|ref|ZP_03035921.1| radical SAM protein, TIGR01212 family [Escherichia coli F11]
 gi|227887932|ref|ZP_04005737.1| radical SAM protein [Escherichia coli 83972]
 gi|300979940|ref|ZP_07174792.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 200-1]
 gi|301047942|ref|ZP_07194987.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 185-1]
 gi|110345044|gb|ABG71281.1| hypothetical protein YhcC [Escherichia coli 536]
 gi|190905308|gb|EDV64944.1| radical SAM protein, TIGR01212 family [Escherichia coli F11]
 gi|227835328|gb|EEJ45794.1| radical SAM protein [Escherichia coli 83972]
 gi|300300174|gb|EFJ56559.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 185-1]
 gi|300307875|gb|EFJ62395.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 200-1]
 gi|307555304|gb|ADN48079.1| radical SAM protein [Escherichia coli ABU 83972]
 gi|315294871|gb|EFU54210.1| radical SAM protein family [Escherichia coli MS 153-1]
 gi|320194696|gb|EFW69326.1| hypothetical protein EcoM_03138 [Escherichia coli WV_060327]
 gi|324012145|gb|EGB81364.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 60-1]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|260767344|ref|ZP_05876283.1| hypothetical protein VFA_000397 [Vibrio furnissii CIP 102972]
 gi|260617667|gb|EEX42847.1| hypothetical protein VFA_000397 [Vibrio furnissii CIP 102972]
          Length = 310

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LPK+        L+
Sbjct: 142 LELGLQTANDQTLKRINRGHDFACYAEITRRARALGIKVCTHLIVGLPKEGRDDNLATLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P+  E VA+
Sbjct: 202 QVLAVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPTLDEYVAI 244


>gi|606150|gb|AAA58013.1| ORF_f309 [Escherichia coli str. K-12 substr. MG1655]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|191168627|ref|ZP_03030409.1| radical SAM protein, TIGR01212 family [Escherichia coli B7A]
 gi|193065361|ref|ZP_03046432.1| radical SAM protein, TIGR01212 family [Escherichia coli E22]
 gi|194429115|ref|ZP_03061645.1| radical SAM protein, TIGR01212 family [Escherichia coli B171]
 gi|218555781|ref|YP_002388694.1| putative Fe-S oxidoreductase [Escherichia coli IAI1]
 gi|218696916|ref|YP_002404583.1| putative Fe-S oxidoreductase [Escherichia coli 55989]
 gi|256018870|ref|ZP_05432735.1| hypothetical protein ShiD9_08133 [Shigella sp. D9]
 gi|260846024|ref|YP_003223802.1| putative Fe-S oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|260857338|ref|YP_003231229.1| putative Fe-S oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|260869962|ref|YP_003236364.1| putative Fe-S oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|300817534|ref|ZP_07097750.1| radical SAM protein family [Escherichia coli MS 107-1]
 gi|300824366|ref|ZP_07104480.1| radical SAM protein family [Escherichia coli MS 119-7]
 gi|300904403|ref|ZP_07122251.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 84-1]
 gi|301304324|ref|ZP_07210438.1| radical SAM protein family [Escherichia coli MS 124-1]
 gi|307313084|ref|ZP_07592710.1| conserved hypothetical protein [Escherichia coli W]
 gi|309793790|ref|ZP_07688216.1| radical SAM protein family [Escherichia coli MS 145-7]
 gi|331670038|ref|ZP_08370883.1| radical SAM protein, family [Escherichia coli TA271]
 gi|332279958|ref|ZP_08392371.1| Fe-S oxidoreductase [Shigella sp. D9]
 gi|190901321|gb|EDV61088.1| radical SAM protein, TIGR01212 family [Escherichia coli B7A]
 gi|192927002|gb|EDV81625.1| radical SAM protein, TIGR01212 family [Escherichia coli E22]
 gi|194412840|gb|EDX29132.1| radical SAM protein, TIGR01212 family [Escherichia coli B171]
 gi|218353648|emb|CAU99868.1| putative Fe-S oxidoreductase [Escherichia coli 55989]
 gi|218362549|emb|CAR00173.1| putative Fe-S oxidoreductase [Escherichia coli IAI1]
 gi|257755987|dbj|BAI27489.1| predicted Fe-S oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|257761171|dbj|BAI32668.1| predicted Fe-S oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|257766318|dbj|BAI37813.1| predicted Fe-S oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|300403677|gb|EFJ87215.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 84-1]
 gi|300523095|gb|EFK44164.1| radical SAM protein family [Escherichia coli MS 119-7]
 gi|300529832|gb|EFK50894.1| radical SAM protein family [Escherichia coli MS 107-1]
 gi|300840450|gb|EFK68210.1| radical SAM protein family [Escherichia coli MS 124-1]
 gi|306906995|gb|EFN37503.1| conserved hypothetical protein [Escherichia coli W]
 gi|308122747|gb|EFO60009.1| radical SAM protein family [Escherichia coli MS 145-7]
 gi|315062517|gb|ADT76844.1| predicted Fe-S oxidoreductase [Escherichia coli W]
 gi|315257139|gb|EFU37107.1| radical SAM protein family [Escherichia coli MS 85-1]
 gi|320202125|gb|EFW76700.1| radical SAM protein, TIGR01212 family [Escherichia coli EC4100B]
 gi|323162903|gb|EFZ48738.1| radical SAM superfamily protein [Escherichia coli E128010]
 gi|323178613|gb|EFZ64189.1| radical SAM superfamily protein [Escherichia coli 1180]
 gi|323376895|gb|ADX49163.1| conserved hypothetical protein [Escherichia coli KO11]
 gi|324018337|gb|EGB87556.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 117-3]
 gi|331062951|gb|EGI34865.1| radical SAM protein, family [Escherichia coli TA271]
 gi|332102310|gb|EGJ05656.1| Fe-S oxidoreductase [Shigella sp. D9]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|15803751|ref|NP_289785.1| hypothetical protein Z4575 [Escherichia coli O157:H7 EDL933]
 gi|15833344|ref|NP_312117.1| hypothetical protein ECs4090 [Escherichia coli O157:H7 str. Sakai]
 gi|16131101|ref|NP_417678.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|82545552|ref|YP_409499.1| hypothetical protein SBO_3171 [Shigella boydii Sb227]
 gi|89109974|ref|AP_003754.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           W3110]
 gi|157156653|ref|YP_001464689.1| radical SAM family protein [Escherichia coli E24377A]
 gi|157162695|ref|YP_001460013.1| radical SAM family protein [Escherichia coli HS]
 gi|168751617|ref|ZP_02776639.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4113]
 gi|168754193|ref|ZP_02779200.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4401]
 gi|168763748|ref|ZP_02788755.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4501]
 gi|168769067|ref|ZP_02794074.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4486]
 gi|168777266|ref|ZP_02802273.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4196]
 gi|168781355|ref|ZP_02806362.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4076]
 gi|168786097|ref|ZP_02811104.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC869]
 gi|168800925|ref|ZP_02825932.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC508]
 gi|170082745|ref|YP_001732065.1| Fe-S oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
 gi|188493228|ref|ZP_03000498.1| radical SAM protein, TIGR01212 family [Escherichia coli 53638]
 gi|193070333|ref|ZP_03051276.1| radical SAM protein, TIGR01212 family [Escherichia coli E110019]
 gi|194439156|ref|ZP_03071237.1| radical SAM protein, TIGR01212 family [Escherichia coli 101-1]
 gi|195939411|ref|ZP_03084793.1| putative radical SAM protein [Escherichia coli O157:H7 str. EC4024]
 gi|208808640|ref|ZP_03250977.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4206]
 gi|208811982|ref|ZP_03253311.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4045]
 gi|208820153|ref|ZP_03260473.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4042]
 gi|209396579|ref|YP_002272681.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4115]
 gi|217327697|ref|ZP_03443780.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. TW14588]
 gi|218706831|ref|YP_002414350.1| putative Fe-S oxidoreductase [Escherichia coli UMN026]
 gi|238902313|ref|YP_002928109.1| putative Fe-S oxidoreductase [Escherichia coli BW2952]
 gi|253771955|ref|YP_003034786.1| hypothetical protein ECBD_0531 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163153|ref|YP_003046261.1| putative Fe-S oxidoreductase [Escherichia coli B str. REL606]
 gi|254795160|ref|YP_003079997.1| putative Fe-S oxidoreductase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256024214|ref|ZP_05438079.1| putative radical SAM protein [Escherichia sp. 4_1_40B]
 gi|261228222|ref|ZP_05942503.1| putative radical SAM protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255078|ref|ZP_05947611.1| putative radical SAM protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284585|ref|YP_003501403.1| hypothetical protein G2583_3937 [Escherichia coli O55:H7 str.
           CB9615]
 gi|297518050|ref|ZP_06936436.1| putative Fe-S oxidoreductase [Escherichia coli OP50]
 gi|300897979|ref|ZP_07116355.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 198-1]
 gi|300918973|ref|ZP_07135528.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 115-1]
 gi|300926044|ref|ZP_07141866.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 182-1]
 gi|300948866|ref|ZP_07162931.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 116-1]
 gi|300955800|ref|ZP_07168142.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 175-1]
 gi|301025887|ref|ZP_07189374.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 196-1]
 gi|301326356|ref|ZP_07219720.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 78-1]
 gi|301644925|ref|ZP_07244894.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 146-1]
 gi|307139897|ref|ZP_07499253.1| putative Fe-S oxidoreductase [Escherichia coli H736]
 gi|312972513|ref|ZP_07786687.1| radical SAM superfamily protein [Escherichia coli 1827-70]
 gi|83288025|sp|P0ADW7|YHCC_ECO57 RecName: Full=Uncharacterized protein yhcC
 gi|83288026|sp|P0ADW6|YHCC_ECOLI RecName: Full=Uncharacterized protein yhcC
 gi|12517832|gb|AAG58345.1|AE005549_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|2367204|gb|AAC76243.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363563|dbj|BAB37513.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|81246963|gb|ABB67671.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|85676005|dbj|BAE77255.1| predicted Fe-S oxidoreductase [Escherichia coli str. K12 substr.
           W3110]
 gi|157068375|gb|ABV07630.1| radical SAM protein, TIGR01212 family [Escherichia coli HS]
 gi|157078683|gb|ABV18391.1| radical SAM protein, TIGR01212 family [Escherichia coli E24377A]
 gi|169890580|gb|ACB04287.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187767452|gb|EDU31296.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4196]
 gi|188014384|gb|EDU52506.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4113]
 gi|188488427|gb|EDU63530.1| radical SAM protein, TIGR01212 family [Escherichia coli 53638]
 gi|189001123|gb|EDU70109.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4076]
 gi|189358494|gb|EDU76913.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4401]
 gi|189361828|gb|EDU80247.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4486]
 gi|189366158|gb|EDU84574.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4501]
 gi|189374098|gb|EDU92514.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC869]
 gi|189376866|gb|EDU95282.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC508]
 gi|192956392|gb|EDV86852.1| radical SAM protein, TIGR01212 family [Escherichia coli E110019]
 gi|194421852|gb|EDX37858.1| radical SAM protein, TIGR01212 family [Escherichia coli 101-1]
 gi|208728441|gb|EDZ78042.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4206]
 gi|208733259|gb|EDZ81946.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4045]
 gi|208740276|gb|EDZ87958.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4042]
 gi|209157979|gb|ACI35412.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4115]
 gi|209757928|gb|ACI77276.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757930|gb|ACI77277.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757932|gb|ACI77278.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757934|gb|ACI77279.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757936|gb|ACI77280.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|217320064|gb|EEC28489.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. TW14588]
 gi|218433928|emb|CAR14845.1| putative Fe-S oxidoreductase [Escherichia coli UMN026]
 gi|238862383|gb|ACR64381.1| predicted Fe-S oxidoreductase [Escherichia coli BW2952]
 gi|242378754|emb|CAQ33544.1| predicted Fe-S oxidoreductase [Escherichia coli BL21(DE3)]
 gi|253322999|gb|ACT27601.1| conserved hypothetical protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975054|gb|ACT40725.1| predicted Fe-S oxidoreductase [Escherichia coli B str. REL606]
 gi|253979210|gb|ACT44880.1| predicted Fe-S oxidoreductase [Escherichia coli BL21(DE3)]
 gi|254594560|gb|ACT73921.1| predicted Fe-S oxidoreductase [Escherichia coli O157:H7 str.
           TW14359]
 gi|260447762|gb|ACX38184.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|284923233|emb|CBG36327.1| radical SAM superfamily protein [Escherichia coli 042]
 gi|290764458|gb|ADD58419.1| hypothetical protein G2583_3937 [Escherichia coli O55:H7 str.
           CB9615]
 gi|299879909|gb|EFI88120.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 196-1]
 gi|300317346|gb|EFJ67130.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 175-1]
 gi|300358327|gb|EFJ74197.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 198-1]
 gi|300413915|gb|EFJ97225.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 115-1]
 gi|300417902|gb|EFK01213.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 182-1]
 gi|300451671|gb|EFK15291.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 116-1]
 gi|300846920|gb|EFK74680.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 78-1]
 gi|301076776|gb|EFK91582.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 146-1]
 gi|310334890|gb|EFQ01095.1| radical SAM superfamily protein [Escherichia coli 1827-70]
 gi|315617018|gb|EFU97628.1| radical SAM superfamily protein [Escherichia coli 3431]
 gi|320181486|gb|EFW56404.1| hypothetical protein SGB_01356 [Shigella boydii ATCC 9905]
 gi|320186697|gb|EFW61421.1| hypothetical protein SGF_01146 [Shigella flexneri CDC 796-83]
 gi|320189564|gb|EFW64223.1| hypothetical protein ECoD_04571 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640282|gb|EFX09854.1| putative Fe-S oxidoreductase [Escherichia coli O157:H7 str. G5101]
 gi|320645579|gb|EFX14588.1| putative Fe-S oxidoreductase [Escherichia coli O157:H- str. 493-89]
 gi|320650889|gb|EFX19346.1| putative Fe-S oxidoreductase [Escherichia coli O157:H- str. H 2687]
 gi|320656270|gb|EFX24182.1| putative Fe-S oxidoreductase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320661960|gb|EFX29368.1| putative Fe-S oxidoreductase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666795|gb|EFX33774.1| putative Fe-S oxidoreductase [Escherichia coli O157:H7 str. LSU-61]
 gi|326337912|gb|EGD61746.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. 1125]
 gi|326347481|gb|EGD71206.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. 1044]
 gi|332090883|gb|EGI95974.1| radical SAM superfamily protein [Shigella boydii 3594-74]
 gi|332345168|gb|AEE58502.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|326203627|ref|ZP_08193491.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325986447|gb|EGD47279.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 338

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GV  I LGVQSL+   L+   R H+    I A  + ++    +    +  LP  T  +  
Sbjct: 115 GVRTIELGVQSLDYHVLKCTNRGHDIEAVINAAKMIKDRGFSLGIQTMIGLPGDTGVKAV 174

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              ++ +  A D + +Y   + + T   KM+ +G     +   AVD+        SA  L
Sbjct: 175 ATARKVVELAPDIVRIYPTLVIENTYLQKMYNEGRYQPLTVEEAVDI--------SAELL 226

Query: 249 HAYEISN 255
             YE +N
Sbjct: 227 DIYERNN 233


>gi|242399782|ref|YP_002995207.1| Histone acetyltransferase Elp3 like protein [Thermococcus sibiricus
           MM 739]
 gi|242266176|gb|ACS90858.1| Histone acetyltransferase Elp3 like protein [Thermococcus sibiricus
           MM 739]
          Length = 593

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 96/247 (38%), Gaps = 20/247 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P            K G  R+ LGVQ++       + R H   + + A  L +
Sbjct: 240 VGLTIETRPDWAMEKQIDRMLKLGTTRVELGVQTVFNFIYERVKRGHTVEDTLRATQLLK 299

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     Q       +  D L +Y   + K T+ Y+ +K+G
Sbjct: 300 DAGLKINYHMMPGLPGSNFERDLKAFQIIFEDERFRPDMLKVYPTLVTKDTILYRWYKEG 359

Query: 223 DLVLPSENVAVDL----YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI-- 276
                +   AV+L    Y +         +   +I            NL    + + +  
Sbjct: 360 KYRPYTTEEAVELLVEVYKMLPKWVRVMRIQR-DIPVQLVEAGVKHSNLGQLVFNELVRR 418

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN-----GHAVVEKEFLSSEQQADEFL 331
           GI P      +VG       IE   E  +K++R++     GH +    FLS E   ++ L
Sbjct: 419 GIRPREIRFREVGHQMQKFGIEPEVEH-IKLLREDYEASEGHEI----FLSFEDVKNDIL 473

Query: 332 MMGLRLR 338
           +  +RLR
Sbjct: 474 IGFIRLR 480


>gi|154337986|ref|XP_001565219.1| acetyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062266|emb|CAM36654.1| acetyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 618

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 12/121 (9%)

Query: 96  IAKNWTVSSN-----VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           +A+  T++ N     + IT+E  P  +  +  + +R  GV R+ LG+Q L++  L  + R
Sbjct: 230 LAEELTLNENARCRIIGITVETRPDYISAHELRRFRSLGVTRVQLGIQHLDDDILNIINR 289

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL------SYAVDHLSL 204
           +   ++ + AI    +   ++    +  LP  +  + +MEL   L      S+ VD   +
Sbjct: 290 DCPTAKTVVAIQRLLDAGFKVDAHWMPDLPGSSFEK-DMELFETLFSAENESFQVDQWKV 348

Query: 205 Y 205
           Y
Sbjct: 349 Y 349


>gi|331250023|ref|XP_003337624.1| hypothetical protein PGTG_19444 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309316614|gb|EFP93205.1| hypothetical protein PGTG_19444 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 538

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 18/246 (7%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +   A+
Sbjct: 205 IGITIETRPDYCLEPHLTSMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRATCESFQKAK 264

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q++   +   ++  D L +Y L + +GT  Y++ + 
Sbjct: 265 DAGFKVVSHMMPDLPNVGVERDLEQFKEYFENP-AFRSDGLKIYPLLVIRGTGVYELWRT 323

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGD 274
           G     + N  VD+     ++        Y +     +     G E  +L  L   R  D
Sbjct: 324 GRYKNYTPNALVDIVARILALIPPW-TRVYRVQRDIPMPLVSSGVENGNLRELALQRLKD 382

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
           +  +      R +VG H +   +       +++VR++  A    E FLS E  A + L+ 
Sbjct: 383 FGAVCRDIRHR-EVGIHEIHFKVRP---DQVELVRRDYVANGGWETFLSYEDPAKDILIG 438

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 439 LLRLRK 444


>gi|260775401|ref|ZP_05884298.1| hypothetical protein VIC_000775 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608582|gb|EEX34747.1| hypothetical protein VIC_000775 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 319

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 1/114 (0%)

Query: 122 FQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             GY + G    + LG+Q+    +L+ + R H+ +   +    AR +  ++   LI  LP
Sbjct: 130 LSGYVREGFEIWLELGLQTANNDTLKRINRGHDFNCYASIAKRARALGIKVCTHLIVGLP 189

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           K+T       +++ +    D + L+ L I +G+   K  K G L  PS    VD
Sbjct: 190 KETHQDNIDTMRKVIDVGTDGIKLHSLHIVEGSTMAKAWKAGKLNAPSLQQYVD 243


>gi|169624140|ref|XP_001805476.1| hypothetical protein SNOG_15322 [Phaeosphaeria nodorum SN15]
 gi|111056135|gb|EAT77255.1| hypothetical protein SNOG_15322 [Phaeosphaeria nodorum SN15]
          Length = 572

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 232 VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAKTFCLSK 291

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L + + Y        D L +Y   + +GT  Y++ 
Sbjct: 292 DAGFKVVSHMMPDLPNVGM---ERDLDQFVEYFANPDFRTDGLKIYPTLVIRGTGLYELW 348

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 349 RTGRYKNYTPNALIDI 364


>gi|331243335|ref|XP_003334311.1| elongator complex protein 3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313301|gb|EFP89892.1| elongator complex protein 3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 538

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 18/246 (7%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +   A+
Sbjct: 205 IGITIETRPDYCLEPHLTSMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRATCESFQKAK 264

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q++   +   ++  D L +Y L + +GT  Y++ + 
Sbjct: 265 DAGFKVVSHMMPDLPNVGVERDLEQFKEYFENP-AFRSDGLKIYPLLVIRGTGVYELWRT 323

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGD 274
           G     + N  VD+     ++        Y +     +     G E  +L  L   R  D
Sbjct: 324 GRYKNYTPNALVDIVARILALIPPW-TRVYRVQRDIPMPLVSSGVENGNLRELALQRLKD 382

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
           +  +      R +VG H +   +       +++VR++  A    E FLS E  A + L+ 
Sbjct: 383 FGAVCRDIRHR-EVGIHEIHFKVRP---DQVELVRRDYVANGGWETFLSYEDPAKDILIG 438

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 439 LLRLRK 444


>gi|168262658|ref|ZP_02684631.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205348512|gb|EDZ35143.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++L  + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +  ++    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQSECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|206578177|ref|YP_002239691.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Klebsiella pneumoniae
           342]
 gi|288936533|ref|YP_003440592.1| RNA modification enzyme, MiaB family [Klebsiella variicola At-22]
 gi|229890612|sp|B5XZQ0|MIAB_KLEP3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206567235|gb|ACI09011.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Klebsiella pneumoniae
           342]
 gi|288891242|gb|ADC59560.1| RNA modification enzyme, MiaB family [Klebsiella variicola At-22]
          Length = 474

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E+    LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEDKKQRLYILQERI 369


>gi|313623477|gb|EFR93679.1| radical SAM protein, family [Listeria innocua FSL J1-023]
          Length = 321

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        Q
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|293416640|ref|ZP_06659279.1| TIGR01212 family radical SAM protein [Escherichia coli B185]
 gi|291431996|gb|EFF04979.1| TIGR01212 family radical SAM protein [Escherichia coli B185]
          Length = 320

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 255


>gi|116873096|ref|YP_849877.1| hypothetical protein lwe1680 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741974|emb|CAK21098.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 321

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        Q
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|73748451|ref|YP_307690.1| ELP3 family histone acetyltransferase [Dehalococcoides sp. CBDB1]
 gi|73660167|emb|CAI82774.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. CBDB1]
          Length = 459

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P        Q     G  R+ LGVQ L++   + + R H  S+   A  L R
Sbjct: 129 VGLCIETRPDICGKAEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHRVSDVAEATCLLR 188

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               ++ +  +  LP  +  + ++ L R +     +  D L LY   + +GT+  +  K+
Sbjct: 189 EYGLKVHYHWMPGLPGSS-PEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKE 247

Query: 222 G 222
           G
Sbjct: 248 G 248


>gi|300938127|ref|ZP_07152901.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 21-1]
 gi|331684858|ref|ZP_08385450.1| radical SAM protein, family [Escherichia coli H299]
 gi|300456890|gb|EFK20383.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 21-1]
 gi|331078473|gb|EGI49679.1| radical SAM protein, family [Escherichia coli H299]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|209920686|ref|YP_002294770.1| hypothetical protein ECSE_3495 [Escherichia coli SE11]
 gi|293449544|ref|ZP_06663965.1| TIGR01212 family radical SAM protein [Escherichia coli B088]
 gi|331679290|ref|ZP_08379962.1| radical SAM protein, family [Escherichia coli H591]
 gi|209913945|dbj|BAG79019.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|291322634|gb|EFE62063.1| TIGR01212 family radical SAM protein [Escherichia coli B088]
 gi|323946935|gb|EGB42951.1| radical SAM protein [Escherichia coli H120]
 gi|331073355|gb|EGI44678.1| radical SAM protein, family [Escherichia coli H591]
          Length = 320

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 255


>gi|293412583|ref|ZP_06655306.1| TIGR01212 family radical SAM protein [Escherichia coli B354]
 gi|291469354|gb|EFF11845.1| TIGR01212 family radical SAM protein [Escherichia coli B354]
          Length = 320

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 255


>gi|117625503|ref|YP_858826.1| putative Fe-S oxidoreductase [Escherichia coli APEC O1]
 gi|170683121|ref|YP_001745483.1| radical SAM family protein [Escherichia coli SMS-3-5]
 gi|215488527|ref|YP_002330958.1| predicted Fe-S oxidoreductase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218560281|ref|YP_002393194.1| Fe-S oxidoreductase [Escherichia coli S88]
 gi|237706037|ref|ZP_04536518.1| radical SAM protein [Escherichia sp. 3_2_53FAA]
 gi|306816447|ref|ZP_07450579.1| putative Fe-S oxidoreductase [Escherichia coli NC101]
 gi|312968450|ref|ZP_07782659.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|115514627|gb|ABJ02702.1| putative Fe-S oxidoreductase [Escherichia coli APEC O1]
 gi|170520839|gb|ACB19017.1| radical SAM protein, TIGR01212 family [Escherichia coli SMS-3-5]
 gi|215266599|emb|CAS11038.1| predicted Fe-S oxidoreductase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218367050|emb|CAR04821.1| putative Fe-S oxidoreductase [Escherichia coli S88]
 gi|222034928|emb|CAP77671.1| Uncharacterized protein yhcC [Escherichia coli LF82]
 gi|226899077|gb|EEH85336.1| radical SAM protein [Escherichia sp. 3_2_53FAA]
 gi|281180253|dbj|BAI56583.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294491155|gb|ADE89911.1| radical SAM protein, TIGR01212 family [Escherichia coli IHE3034]
 gi|305850012|gb|EFM50471.1| putative Fe-S oxidoreductase [Escherichia coli NC101]
 gi|307625190|gb|ADN69494.1| putative Fe-S oxidoreductase [Escherichia coli UM146]
 gi|312286668|gb|EFR14579.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|312947768|gb|ADR28595.1| putative Fe-S oxidoreductase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315288990|gb|EFU48388.1| radical SAM protein family [Escherichia coli MS 110-3]
 gi|323189168|gb|EFZ74452.1| radical SAM superfamily protein [Escherichia coli RN587/1]
 gi|324008723|gb|EGB77942.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 57-2]
 gi|330909263|gb|EGH37777.1| putative Fe-S oxidoreductase [Escherichia coli AA86]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|16800838|ref|NP_471106.1| hypothetical protein lin1770 [Listeria innocua Clip11262]
 gi|16414257|emb|CAC97001.1| lin1770 [Listeria innocua Clip11262]
          Length = 321

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        Q
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|332299105|ref|YP_004441027.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
 gi|332182208|gb|AEE17896.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
          Length = 626

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 41/84 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS  E  L  + R  N  + I  I L         FDLIY LP  +++ +   + 
Sbjct: 335 LQIGLQSAHEHVLALVHRGFNKKDFIKKIGLLNKSGAVFGFDLIYGLPGDSLSGFRESID 394

Query: 193 RALSYAVDHLSLYQLTIEKGTLFY 216
            A+S   + L +++L++  GT  Y
Sbjct: 395 FAVSLYPNSLEIFRLSVLPGTDLY 418


>gi|315181103|gb|ADT88017.1| radical SAM protein, family/Predicted Fe-S oxidoreductase [Vibrio
           furnissii NCTC 11218]
          Length = 286

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LPK+        L+
Sbjct: 118 LELGLQTANDQTLKRINRGHDFACYAEITRRARALGIKVCTHLIVGLPKEGRDDNLATLE 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P+  E VA+
Sbjct: 178 QVLAVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPTLDEYVAI 220


>gi|290510411|ref|ZP_06549781.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Klebsiella sp. 1_1_55]
 gi|289777127|gb|EFD85125.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Klebsiella sp. 1_1_55]
          Length = 478

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 215 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 265

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 266 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTDDFEK 324

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E+    LY L + I
Sbjct: 325 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEDKKQRLYILQERI 373


>gi|170018539|ref|YP_001723493.1| putative radical SAM protein [Escherichia coli ATCC 8739]
 gi|254038376|ref|ZP_04872434.1| radical SAM protein [Escherichia sp. 1_1_43]
 gi|293406820|ref|ZP_06650746.1| radical SAM protein [Escherichia coli FVEC1412]
 gi|298382561|ref|ZP_06992158.1| yhcC protein [Escherichia coli FVEC1302]
 gi|331643909|ref|ZP_08345040.1| radical SAM protein, family [Escherichia coli H736]
 gi|331654815|ref|ZP_08355815.1| radical SAM protein, family [Escherichia coli M718]
 gi|169753467|gb|ACA76166.1| conserved hypothetical radical SAM protein [Escherichia coli ATCC
           8739]
 gi|226840000|gb|EEH72021.1| radical SAM protein [Escherichia sp. 1_1_43]
 gi|291426826|gb|EFE99858.1| radical SAM protein [Escherichia coli FVEC1412]
 gi|298277701|gb|EFI19217.1| yhcC protein [Escherichia coli FVEC1302]
 gi|315137797|dbj|BAJ44956.1| radical SAM protein [Escherichia coli DH1]
 gi|323936095|gb|EGB32389.1| radical SAM protein [Escherichia coli E1520]
 gi|323941689|gb|EGB37868.1| SAM protein [Escherichia coli E482]
 gi|323961134|gb|EGB56748.1| SAM protein [Escherichia coli H489]
 gi|323970226|gb|EGB65497.1| SAM protein [Escherichia coli TA007]
 gi|324119576|gb|EGC13458.1| SAM protein [Escherichia coli E1167]
 gi|331037380|gb|EGI09604.1| radical SAM protein, family [Escherichia coli H736]
 gi|331048197|gb|EGI20274.1| radical SAM protein, family [Escherichia coli M718]
          Length = 320

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 255


>gi|290998209|ref|XP_002681673.1| histone acetyltransferase [Naegleria gruberi]
 gi|284095298|gb|EFC48929.1| histone acetyltransferase [Naegleria gruberi]
          Length = 556

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H  +    +  LA+
Sbjct: 219 IGITIETRPDYCLKPHISNLLEYGCTRLEIGVQSIYEDIARDTNRGHTVASVKRSFTLAK 278

Query: 166 NIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +     +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 279 DQGYKIVAHMMPDLPNSDMERDILGFIEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTG 338

Query: 223 DLVLPSENVAVDL 235
                S +  VDL
Sbjct: 339 QYKNYSPDSLVDL 351


>gi|156089439|ref|XP_001612126.1| histone acetyltransferase, ELP3 family protein [Babesia bovis]
 gi|154799380|gb|EDO08558.1| histone acetyltransferase, ELP3 family protein [Babesia bovis]
          Length = 1110

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 3/118 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T+E  P  +     +  R+ G  R+ LG+Q  + + L+ + R H+   +I AI L +  
Sbjct: 641 LTLETRPDRINPAEIRLLREFGCTRVQLGIQHTDNKVLKHVNRGHDVEASIHAIRLLKEN 700

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             ++   L+  LP  +     +  +R L   S   D   +Y   +   T   + +K G
Sbjct: 701 CYKVDIHLMPDLPSSSPELDMVMFERVLSDESLQADQWKIYPCEVTPFTRIEEWYKSG 758


>gi|331649011|ref|ZP_08350099.1| radical SAM protein, family [Escherichia coli M605]
 gi|323951270|gb|EGB47145.1| SAM protein [Escherichia coli H252]
 gi|323957641|gb|EGB53355.1| SAM protein [Escherichia coli H263]
 gi|331042758|gb|EGI14900.1| radical SAM protein, family [Escherichia coli M605]
          Length = 320

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 255


>gi|78224354|ref|YP_386101.1| hypothetical protein Gmet_3163 [Geobacter metallireducens GS-15]
 gi|78195609|gb|ABB33376.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 310

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           PS V ++   GY +     + LG+QS  +++L  + R H+ +    A+  +R    R+  
Sbjct: 126 PSEV-LDLLAGYARRTYFWLELGLQSPLDRTLALINRGHDFAAFADAVVWSRERGIRVCA 184

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            +I  LP ++  +     +      V+ + L+QL + KGT+  +M++ G++     +  V
Sbjct: 185 HVILGLPGESREEMLATAEILNGLGVEGVKLHQLHVMKGTVLEEMYRRGEVRCLERDAYV 244

Query: 234 DL 235
           D+
Sbjct: 245 DI 246


>gi|154312748|ref|XP_001555701.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150849777|gb|EDN24970.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 581

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 237 VGITIETRPDYCLQPHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVASVAETFCLAK 296

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+    +   ++  D L +Y   + +GT  Y++ + 
Sbjct: 297 DAGFKVVSHMMPDLPNVGMERDLDQFREYFENP-AFRTDGLKIYPTLVIRGTGLYELWRT 355

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +D+
Sbjct: 356 GRYKNYTPNALIDI 369


>gi|289580552|ref|YP_003479018.1| histone acetyltransferase [Natrialba magadii ATCC 43099]
 gi|289530105|gb|ADD04456.1| histone acetyltransferase, ELP3 family [Natrialba magadii ATCC
           43099]
          Length = 556

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 71/192 (36%), Gaps = 8/192 (4%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNV 106
           QE F++  L  M        P     I F        E      + D IA+N T    N+
Sbjct: 176 QEWFVKRALEAMNDYDVDKEPEPAEGISFAEDP----EEYEFKYLEDVIAENETGDVRNI 231

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
             T E  P   +          G  ++ +GVQ+  E+  R + R H A  +I A    R+
Sbjct: 232 GTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGAQASIDANQRLRD 291

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              ++ F ++   P  +      + +R      +  D+L +Y   I +GT  Y     G+
Sbjct: 292 SAFKVGFHMMPGQPGMSKEMCLEDFRRIFEEEQWKPDYLKIYPTLIVRGTATYDWWHKGE 351

Query: 224 LVLPSENVAVDL 235
                 + A DL
Sbjct: 352 YDPLDNDEAADL 363


>gi|218782145|ref|YP_002433463.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763529|gb|ACL05995.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 450

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/253 (17%), Positives = 97/253 (38%), Gaps = 43/253 (16%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C    + RR +      +  FL E +W  +  G   + +++F     ++    
Sbjct: 209 CPGKCNFCYMGMYGRRVR---RKSVDRFLDETEWAVRKMG---LKNVYFMDLEFAI---- 258

Query: 88  NIALILD--------GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           N   +LD        G+  NW   + V        + ++    Q   +AG + I  GV++
Sbjct: 259 NKRFVLDFCQGLEDRGLILNWCCQTRV--------TDMDEEVAQAMAQAGCSLIHFGVEA 310

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++ L+  G+     +   A+ L ++   R +  + +  P +   + E  ++ AL+   
Sbjct: 311 GTDRILKQTGKGILVKDCYKAVRLCKSFGIRTALFMNFGFPGEHDYEMEATIKLALNLDP 370

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D+ + + +    GT              ++N  ++  N       AH    Y   +H   
Sbjct: 371 DYAAFHLIVPFPGTAL------------ADNCGLNPENF-----PAHQYPHYNFFDHDLE 413

Query: 260 GAESLHNLNYWRY 272
             + + +  YW++
Sbjct: 414 KLKRMLHQAYWKF 426


>gi|323491064|ref|ZP_08096256.1| putative Fe-S oxidoreductase [Vibrio brasiliensis LMG 20546]
 gi|323314728|gb|EGA67800.1| putative Fe-S oxidoreductase [Vibrio brasiliensis LMG 20546]
          Length = 315

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 2/115 (1%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV +    GY + G    + LG+Q+    +L+ + R H+          AR +  ++ 
Sbjct: 123 PDSV-LELLAGYVEQGYEIWLELGLQTANNHTLKRINRGHDFECYAEITRRARALGIKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
             LI  LPK+T       +Q+ L    D + L+ L I +G+   K  K G L  P
Sbjct: 182 THLIVGLPKETRQDNIATMQQVLEVGTDGIKLHGLHIVEGSTMAKAWKAGKLAAP 236


>gi|312220834|emb|CBY00775.1| similar to elongator complex protein 3 [Leptosphaeria maculans]
          Length = 625

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 285 VGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAKTFCLSK 344

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L + + Y        D L +Y   + +GT  Y++ 
Sbjct: 345 DAGFKVVSHMMPDLPNVGM---ERDLDQFVEYFSNPDFRTDGLKIYPTLVIRGTGLYELW 401

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 402 RTGRYKNYTPNALIDI 417


>gi|220928139|ref|YP_002505048.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998467|gb|ACL75068.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 336

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 58/147 (39%)

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           +I +   P  +         + GV  I LGVQSL+   L+   R H   E + A  + ++
Sbjct: 91  QIRLSTRPDYINPTILDLLERYGVKTIELGVQSLDYDVLKCTNRGHGIEEVLNAAMMIKD 150

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
               +    +  LP  T  +     ++ +  + + + +Y   + K T   K++ DG    
Sbjct: 151 RGFSLGIQTMIGLPGDTRAKAVATAKKVVELSPNIVRIYPTLVIKNTFLQKLYYDGRYQP 210

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEI 253
            +   AVD+      I   H ++   I
Sbjct: 211 LTIEEAVDISAELLDIYEKHRINVIRI 237


>gi|301022113|ref|ZP_07186039.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 69-1]
 gi|300397709|gb|EFJ81247.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 69-1]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGKAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|284161855|ref|YP_003400478.1| histone acetyltransferase, ELP3 family [Archaeoglobus profundus DSM
           5631]
 gi|284011852|gb|ADB57805.1| histone acetyltransferase, ELP3 family [Archaeoglobus profundus DSM
           5631]
          Length = 526

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT E  P      +     + G  ++ +GVQS+ +  L  + R H   + + A  L ++ 
Sbjct: 201 ITFETRPDYAGEEHIIEMLRFGGTKVEIGVQSVYDDVLETIRRGHTVEDIVRATQLLKDS 260

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             ++ + ++  LP     + ++++ R +     +  D+L +Y   + +GT  YK +K G 
Sbjct: 261 AFKVGYHVMPGLPNSNFER-DLKMFRIIFEDERFKPDYLKIYPTLVVEGTELYKWYKKGL 319

Query: 224 LVLPSENVAVDLYNLTQ 240
               S    V+L  L +
Sbjct: 320 YKPYSTEEVVELIALAK 336


>gi|261253842|ref|ZP_05946415.1| hypothetical protein VIA_003869 [Vibrio orientalis CIP 102891]
 gi|260937233|gb|EEX93222.1| hypothetical protein VIA_003869 [Vibrio orientalis CIP 102891]
          Length = 314

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P +V ++   GY + G    + LG+Q+   Q+L+ + R H+          AR +  ++ 
Sbjct: 123 PDAV-LDLLSGYVEQGYEIWLELGLQTANNQTLKRINRGHDFECYAEITKRARALGIKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
             LI  LPK+T       +++ L+   D + L+ L I +G+   K  K G L  P
Sbjct: 182 THLIVGLPKETREDNIATMEQVLAVGTDGIKLHGLHIVEGSTMAKAWKAGRLEAP 236


>gi|253702143|ref|YP_003023332.1| radical SAM protein [Geobacter sp. M21]
 gi|251776993|gb|ACT19574.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 474

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRN---HNASEAIAAIHLARNIFPRMSFDLIYA 178
           F  YRKAGV  +S+G++  E+Q +  LG+      A EA+  IH    I    SF  I  
Sbjct: 294 FWKYRKAGVAHVSIGIEGAEQQRVDALGKGISIDAAREALEIIH-EHGIVSEASF--ILG 350

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            P +T    +  LQRA     D+ + + L 
Sbjct: 351 FPDETHASVQATLQRAKLCNPDNANFFALA 380


>gi|145590387|ref|YP_001152389.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282155|gb|ABP49737.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 483

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P  V+        + GV R+ LGVQS+ +  L+ + R H  +E   A  L +
Sbjct: 140 VALAVETRPDYVDGAEADFLLRLGVTRMELGVQSIYDDVLQRVKRGHGVAEVARATALLK 199

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++ + L+  LP     + ++E+ + +     +  D + +Y   +  GT  Y   + 
Sbjct: 200 DSAYKVCYHLMPGLPGSDPDR-DLEMVKEVFSDPRFVPDCVKIYPTYVVPGTELYDEWRR 258

Query: 222 G 222
           G
Sbjct: 259 G 259


>gi|28897259|ref|NP_796864.1| hypothetical protein VP0485 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260366328|ref|ZP_05778780.1| radical SAM domain protein [Vibrio parahaemolyticus K5030]
 gi|260876226|ref|ZP_05888581.1| radical SAM domain protein [Vibrio parahaemolyticus AN-5034]
 gi|260897180|ref|ZP_05905676.1| radical SAM domain protein [Vibrio parahaemolyticus Peru-466]
 gi|260902193|ref|ZP_05910588.1| radical SAM domain protein [Vibrio parahaemolyticus AQ4037]
 gi|28805468|dbj|BAC58748.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087985|gb|EFO37680.1| radical SAM domain protein [Vibrio parahaemolyticus Peru-466]
 gi|308093025|gb|EFO42720.1| radical SAM domain protein [Vibrio parahaemolyticus AN-5034]
 gi|308108482|gb|EFO46022.1| radical SAM domain protein [Vibrio parahaemolyticus AQ4037]
 gi|308114730|gb|EFO52270.1| radical SAM domain protein [Vibrio parahaemolyticus K5030]
          Length = 319

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       LQ
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKETRDDNIETLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 202 KVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAI 244


>gi|39941138|ref|XP_360106.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145022138|gb|EDK06158.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 569

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 231 VGITIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAK 290

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 291 DAGFKVVSHMMPDLPNVGMERDVDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 350

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 351 RYQNYTPNGLIDL 363


>gi|312877235|ref|ZP_07737203.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795949|gb|EFR12310.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 218

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 2/117 (1%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++    +  +   V  I LG+QS+ +  L    R H A  +  A+ + +  
Sbjct: 88  IRISTRPDCIDEERLRLLKLYNVKTIELGIQSMFDDVLNACARGHTAQHSKNAMEMIKKF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +   ++  LPK T  + ++E  + L+ ++ D   +Y   + +GT   KM++ G+
Sbjct: 148 GFLLGVQVMVGLPKST-PEKDIETAKILTGFSPDIARIYPTLVIEGTYLAKMYQKGE 203


>gi|156052232|ref|XP_001592077.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154705301|gb|EDO05040.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 581

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 237 VGITIETRPDYCLQPHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAK 296

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+    +   ++  D L +Y   + +GT  Y++ + 
Sbjct: 297 DAGFKVVSHMMPDLPNVGMERDLDQFREYFENP-AFRTDGLKIYPTLVIRGTGLYELWRT 355

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +D+
Sbjct: 356 GRYKNYTPNALIDI 369


>gi|222087519|ref|YP_002546056.1| hypothetical protein Arad_4404 [Agrobacterium radiobacter K84]
 gi|221724967|gb|ACM28123.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 424

 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q  ++  L+ + R H+ ++AI  I   R + P MSF  D+I   P +T   +E  
Sbjct: 251 LHLSLQHGDDMILKRMKRRHSRADAIRFIEDVRRLRPEMSFGADMIAGFPTETGAMFENA 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +  A   A+ HL ++  +   GT   +M
Sbjct: 311 VSLAEEAAIAHLHVFPYSPRPGTPAARM 338


>gi|168217004|ref|ZP_02642629.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
 gi|182380985|gb|EDT78464.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
          Length = 357

 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 22/220 (10%)

Query: 19  LGVYVHWPFCVKKCPYCD------FNSHV---RRYKVGQENFIQSFL---TEMQWMRQLT 66
           + ++V    C   C +C+       N  +    +YK  QEN + S     T  +++  + 
Sbjct: 8   IPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYK--QENKVNSDFVRKTIEEYIETIG 65

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVE---VNNF 122
               I  + F GGT + I+      +L  +AK +     ++ I +   P  ++   +++ 
Sbjct: 66  EGDRILEVSFFGGTFTAIDINKQRELL-AVAKEYKDKKIIDYIRLSTRPDYIDEFILDHL 124

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           + Y+   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 125 KSYK---VDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           T  +     + ++    D   +Y     K T    M+ +G
Sbjct: 182 TFEKDVETTKESIKMKPDICRIYPALTVKNTPMEDMYLEG 221


>gi|218701980|ref|YP_002409609.1| putative Fe-S oxidoreductase [Escherichia coli IAI39]
 gi|218371966|emb|CAR19822.1| putative Fe-S oxidoreductase [Escherichia coli IAI39]
          Length = 309

 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRMTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|161616339|ref|YP_001590304.1| hypothetical protein SPAB_04148 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552021|ref|ZP_02345774.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|194443195|ref|YP_002042587.1| hypothetical protein SNSL254_A3591 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|198245440|ref|YP_002217300.1| hypothetical protein SeD_A3689 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205354230|ref|YP_002228031.1| hypothetical protein SG3219 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858577|ref|YP_002245228.1| hypothetical protein SEN3162 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|161365703|gb|ABX69471.1| hypothetical protein SPAB_04148 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401858|gb|ACF62080.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|197939956|gb|ACH77289.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205274011|emb|CAR39017.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323233|gb|EDZ11072.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|206710380|emb|CAR34738.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326625079|gb|EGE31424.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629352|gb|EGE35695.1| hypothetical protein SG9_3263 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 309

 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++L  + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + +D Y LT
Sbjct: 228 WEAGRL----NGIELDDYTLT 244


>gi|153838414|ref|ZP_01991081.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
 gi|149748177|gb|EDM59036.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
          Length = 317

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       LQ
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKETRDDNIETLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 202 KVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAI 244


>gi|187731284|ref|YP_001881875.1| radical SAM protein [Shigella boydii CDC 3083-94]
 gi|187428276|gb|ACD07550.1| radical SAM protein, TIGR01212 family [Shigella boydii CDC 3083-94]
          Length = 309

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           R +   VD + L+ L I KG++  K  + G L
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL 233


>gi|331674738|ref|ZP_08375497.1| radical SAM protein, family [Escherichia coli TA280]
 gi|331068177|gb|EGI39573.1| radical SAM protein, family [Escherichia coli TA280]
          Length = 320

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGHAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 255


>gi|163751959|ref|ZP_02159171.1| hypothetical protein KT99_01389 [Shewanella benthica KT99]
 gi|161328175|gb|EDP99341.1| hypothetical protein KT99_01389 [Shewanella benthica KT99]
          Length = 308

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 13/191 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-FFGGGTPSLIEPQNIA 90
           C YC+  S    ++ G E  IQ    +++  R+    RS   I +F   T +  E + + 
Sbjct: 45  CTYCNVASF--SFEHGTELSIQE---QLKLGRERAKGRSSKYIAYFQAYTSTYDEYRVLK 99

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLR 146
              D    +  +   V + +   P  V    ++    Y+  G+   + LG+QS  +++L+
Sbjct: 100 AKYDEAISDADI---VGLCVGTRPDCVSDEVIDLLLSYQNQGIEVWLELGLQSANDKTLK 156

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H  ++    +  AR    ++   LI  LP ++   +   L+  LS  VD L L+ 
Sbjct: 157 RINRGHTYNDYRDTVLRARAKGLKVCTHLILGLPGESHQDYLSSLEAVLSTGVDGLKLHP 216

Query: 207 LTIEKGTLFYK 217
           L I +G+   K
Sbjct: 217 LHIVEGSTMAK 227


>gi|114564114|ref|YP_751628.1| putative radical SAM protein [Shewanella frigidimarina NCIMB 400]
 gi|114335407|gb|ABI72789.1| conserved hypothetical radical SAM protein [Shewanella
           frigidimarina NCIMB 400]
          Length = 322

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 125 YRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           Y++ G+   + LG+Q+    +L+ + R H   E    +  AR    ++   LI  LP +T
Sbjct: 147 YQQRGIEVWLELGLQTANNHTLKRINRGHQLCEYRQTVKKARAKGIKVCTHLILGLPGET 206

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
              +   LQ  L   VD L L+ L I +G++  K
Sbjct: 207 SADYFNSLQTVLGIGVDGLKLHPLHIVEGSIMAK 240


>gi|257066164|ref|YP_003152420.1| Radical SAM domain-containing protein [Anaerococcus prevotii DSM
           20548]
 gi|256798044|gb|ACV28699.1| Radical SAM domain protein [Anaerococcus prevotii DSM 20548]
          Length = 359

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 21/201 (10%)

Query: 23  VHWPFCVKKCPY-CDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +  PF    CP+ C F + V+    + K+ ++  I+     + +  +    R+    FFG
Sbjct: 10  IFIPFL--GCPHDCAFCNQVKITNFKDKLDKDKLIEEIEKNLSYFPE---KRADELAFFG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           G    L E   IA +   +AK++     ++ I +   P  +  +     ++  V+ I LG
Sbjct: 65  GSFTGLDEDVMIAYL--DVAKSYKDKGIIDRIRLSTRPDYINNSILDILKEKSVDVIELG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA-LPKQTMTQWEMELQRAL 195
           +QSL+++ L +  R H   ++  A  L +       F L +  +P   M +++  ++ A+
Sbjct: 123 IQSLDQKVLDYNERGHKIEDSYKASELIK----EYGFSLGHQIMPGLFMDEYKKSIKTAI 178

Query: 196 SYA---VDHLSLYQLTIEKGT 213
             A    D + +Y   + K T
Sbjct: 179 DSANIGPDMVRIYPTLVIKDT 199


>gi|241597469|ref|XP_002404681.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215500449|gb|EEC09943.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 553

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 5/124 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  V ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  
Sbjct: 213 TKCVGITIETRPDYCLKRHLGDMLLYGCTRLEIGVQSVHEDVARDTNRGHTVRAVCESFR 272

Query: 163 LARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP    ++ + Q+ +EL    ++ +D L +Y   + +GT  Y++
Sbjct: 273 LAKDAGFKVVAHMMPNLPNVDFERDIDQF-VELFENPAFRMDGLKVYPTLVIRGTGLYEL 331

Query: 219 HKDG 222
            K G
Sbjct: 332 WKTG 335


>gi|20094488|ref|NP_614335.1| RNA polymerase II complex ELP3 subunit [Methanopyrus kandleri AV19]
 gi|19887590|gb|AAM02265.1| ELP3 component of the RNA polymerase II complex, consists of an
           N-terminal BioB/LipA-like domain and a C-terminal
           histone acetylase domain [Methanopyrus kandleri AV19]
          Length = 549

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V IT E  P   +  +     K G  R+ +GVQ++ +  L+ + R H   + + A  + +
Sbjct: 215 VGITFETRPDYCKEEHVDHMLKLGATRVEVGVQTIYDFILKRVDRGHTVKDTVEATRILK 274

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  LP     +    L+R      +  D L +Y   + + T  Y   K G
Sbjct: 275 DAGLKVCYHIMPGLPGSNPERDLRMLKRLFKDPRFKPDMLKIYPCMVFEDTPLYDAWKRG 334

Query: 223 DLVLPSENVAVDL 235
           +     E  AV +
Sbjct: 335 EYEPYDEETAVKV 347


>gi|85103762|ref|XP_961595.1| hypothetical protein NCU01229 [Neurospora crassa OR74A]
 gi|7635787|emb|CAB88553.1| probable histone acetyltransferase [Neurospora crassa]
 gi|28923142|gb|EAA32359.1| hypothetical protein NCU01229 [Neurospora crassa OR74A]
          Length = 571

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 231 VGITIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAK 290

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 291 DAGFKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 350

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 351 RYQNYTPNGLIDL 363


>gi|299823065|ref|ZP_07054951.1| radical SAM protein [Listeria grayi DSM 20601]
 gi|299816594|gb|EFI83832.1| radical SAM protein [Listeria grayi DSM 20601]
          Length = 318

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+QS  +++   + R H+ +  +  +   +    R+   +I  LPK+T        +
Sbjct: 153 IELGLQSAHDETGILINRAHDYACYLEGVQKLKARGIRVCTHIINGLPKETPEMMMETAR 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   K +++GDL   S+   V L
Sbjct: 213 KVVDSGVDGIKIHLLHLLKGTPMVKDYQNGDLTFLSKEAYVSL 255


>gi|315928519|gb|EFV07822.1| Oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 112

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
           SL +Y H PFC   C +C  N      +  +E ++     E+  +   L   R +  + F
Sbjct: 45  SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF 104

Query: 77  GGGTPSL 83
           GGGTP+ 
Sbjct: 105 GGGTPTF 111


>gi|268678902|ref|YP_003303333.1| radical SAM protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268616933|gb|ACZ11298.1| Radical SAM domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 564

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LGVQSL++ SL  + R H+A  ++ AI        ++   LI  LP ++   WE  ++
Sbjct: 141 VELGVQSLQDVSLERINRGHSAHASLEAIERLHVKGLKVYAHLILGLPDESFCMWEESVK 200

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
             +   +D +  + L I  GT
Sbjct: 201 GLVEAGIDGIKFHNLHIISGT 221


>gi|312897518|ref|ZP_07756938.1| radical SAM protein family [Megasphaera micronuciformis F0359]
 gi|310621370|gb|EFQ04910.1| radical SAM protein family [Megasphaera micronuciformis F0359]
          Length = 349

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 23/213 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + V++    C  +C +CD ++   + +V    +  Q   T   + R+      ++  F+G
Sbjct: 6   IPVFIPHLGCPHRCVFCDQHTVTGQAEVPTGADTAQKIAT---YTRKKGAAYEVA--FYG 60

Query: 78  GGTPS--------LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           G   +        L++P   AL      +N  VS+   I     P  ++       ++ G
Sbjct: 61  GSFTAVSATLQEELLQPAYEAL------QNGLVSA---IRCSTRPDCIDDEVLNRLKRYG 111

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V  + LGVQS++++ L+   R H + +   A+ L +     +   L+  LP +  T    
Sbjct: 112 VRTVELGVQSMDDRVLQAAKRGHTSEDVYRAVSLLKKSGFTIGLQLMPGLPGEDWTSLTA 171

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             +   +   D   +Y + +   T    M++ G
Sbjct: 172 TTEAVCNLEPDFTRIYPVVVIANTELEDMYRRG 204


>gi|115678728|ref|XP_001198340.1| PREDICTED: similar to elongator component, putative, partial
           [Strongylocentrotus purpuratus]
          Length = 333

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     K G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 130 IGITIETRPDYCLKRHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQMSK 189

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 190 DAGFKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 249

Query: 223 DLVLPSENVAVDL 235
                  +  VDL
Sbjct: 250 RYKSYPPSTLVDL 262


>gi|270307973|ref|YP_003330031.1| radical SAM superfamily [Dehalococcoides sp. VS]
 gi|270153865|gb|ACZ61703.1| radical SAM superfamily [Dehalococcoides sp. VS]
          Length = 459

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P        Q     G  R+ LGVQ L++   + + R H  ++   A  L R
Sbjct: 129 VGLCIETRPDICGETEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADVAEATRLLR 188

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               ++ +  +  LP  +  + ++ L R +     +  D L LY   + +GT+  +  K+
Sbjct: 189 EYGLKVHYHWMPGLPG-SAPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTVLEEWWKE 247

Query: 222 G 222
           G
Sbjct: 248 G 248


>gi|261330654|emb|CBH13639.1| histone acethyltransferase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 679

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 38/78 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P +V     +  R+ G  R+ LGVQ  ++  L  + R     EA+ AI L +
Sbjct: 284 IGVTLETRPDTVNEEMLRQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTRDEAVHAIKLLK 343

Query: 166 NIFPRMSFDLIYALPKQT 183
           +   ++   L+  LP  T
Sbjct: 344 DSCFKVDIHLMPDLPGST 361


>gi|171692605|ref|XP_001911227.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946251|emb|CAP73052.1| unnamed protein product [Podospora anserina S mat+]
          Length = 572

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P     ++     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 232 VGITIETRPDYCLASHLTDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLSK 291

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q++   +    +  D L +Y   + +GT  Y++ + 
Sbjct: 292 DAGFKVVSHMMPDLPNVGMERDLDQFKEYFENP-DFRTDGLKIYPTLVIRGTGLYELWRT 350

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +DL
Sbjct: 351 GRYKGYTPNGLIDL 364


>gi|89896776|ref|YP_520263.1| hypothetical protein DSY4030 [Desulfitobacterium hafniense Y51]
 gi|89336224|dbj|BAE85819.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 334

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 52/114 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS+ ++++ ++GR H   + +  +   R    R+   +IY LP +T+       Q
Sbjct: 164 VELGLQSIHDRTMEWVGRGHTFEDFLQGLDKLRRRNIRVCTHMIYGLPGETLEDMFGSAQ 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 V  + L+ L + KGT    +++     L S++  + L   T  I  A 
Sbjct: 224 TLAKLDVQGVKLHLLHVLKGTPLADIYEQSPFPLLSQDEYIHLICDTLEILPAQ 277


>gi|289617631|emb|CBI61354.1| unnamed protein product [Sordaria macrospora]
          Length = 571

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 231 VGITIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAK 290

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 291 DAGFKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 350

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 351 RYQNYTPNGLIDL 363


>gi|153840169|ref|ZP_01992836.1| Fe-S oxidoreductase [Vibrio parahaemolyticus AQ3810]
 gi|149746178|gb|EDM57296.1| Fe-S oxidoreductase [Vibrio parahaemolyticus AQ3810]
          Length = 191

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       LQ
Sbjct: 14  LELGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKETRDDNIETLQ 73

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 74  KVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAI 116


>gi|212695675|ref|ZP_03303803.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677348|gb|EEB36955.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 358

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 16/210 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + +++ +  C   C +C+    +  YK  + +EN I+     + +      P+ I+  FF
Sbjct: 8   IPIFIPFLGCPHDCAFCN-QVKITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIA--FF 64

Query: 77  GGG-----TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           GG      T  +I    IAL      K   +     I +   P  +  +     +K  V+
Sbjct: 65  GGSFTGLETDVMISYLEIAL---AYKKKGIID---RIRLSTRPDYINNSILDILKKYEVD 118

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+ + L    R H+  ++I A  L +    ++   ++  L K +        
Sbjct: 119 VIELGIQSLDNEILNANERGHSREDSIKASKLIKEYGFKLGHQIMPGLYKDSYDSAINTG 178

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++    D + +Y   + K T   K++K+
Sbjct: 179 LESIKMNPDMVRIYPTLVIKDTKLEKLYKE 208


>gi|72393213|ref|XP_847407.1| histone acethyltransferase [Trypanosoma brucei TREU927]
 gi|62175732|gb|AAX69862.1| histone acethyltransferase, putative [Trypanosoma brucei]
 gi|70803437|gb|AAZ13341.1| histone acethyltransferase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 679

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 38/78 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P +V     +  R+ G  R+ LGVQ  ++  L  + R     EA+ AI L +
Sbjct: 284 IGVTLETRPDTVNEEMLRQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTRDEAVHAIKLLK 343

Query: 166 NIFPRMSFDLIYALPKQT 183
           +   ++   L+  LP  T
Sbjct: 344 DSCFKVDIHLMPDLPGST 361


>gi|311277817|ref|YP_003940048.1| hypothetical protein Entcl_0486 [Enterobacter cloacae SCF1]
 gi|308747012|gb|ADO46764.1| conserved hypothetical protein [Enterobacter cloacae SCF1]
          Length = 316

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)

Query: 104 SNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIA 159
           S V + +   P  V    ++   GY   G    + LG+QS ++++LR + R H+ +    
Sbjct: 109 SIVGLCVGTRPDCVPEAVLDLLSGYNDRGYEVWLELGLQSAQDKTLRRINRGHDFACYQK 168

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              LAR    ++   LI  LP +        L++ +   VD + L+ L I  G++  K  
Sbjct: 169 TTRLARERGLKVCTHLIVGLPGEGEQACLQTLEQVVDTGVDGIKLHPLHIVTGSIMAKAW 228

Query: 220 KDGDL 224
           + G L
Sbjct: 229 QAGRL 233


>gi|257452428|ref|ZP_05617727.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 330

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 55/116 (47%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I +   P  ++ +  +  RK GV  I LG+QSL+E+ LR   R +   + +++I   ++ 
Sbjct: 74  IRLSTRPDYIQKDILEQLRKYGVKAIELGIQSLDEEVLRRSDRFYTEKQVLSSIQQMQSY 133

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +   ++  LP  ++ +    ++  ++   D   +Y   + + T+  K +  G+
Sbjct: 134 GFEVGIQIMVGLPGSSLEKEIKTIKTLIACQPDTARIYPTLVLEDTILEKQYHQGE 189


>gi|90407388|ref|ZP_01215573.1| hypothetical protein PCNPT3_04102 [Psychromonas sp. CNPT3]
 gi|90311539|gb|EAS39639.1| hypothetical protein PCNPT3_04102 [Psychromonas sp. CNPT3]
          Length = 300

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 4/126 (3%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           SS V + +   P  V    +N    Y   G    + LG+QS  +++L+ + R H+ +   
Sbjct: 109 SSIVGLCVGTRPDCVSDAVLNLLSSYLMRGYEVWLELGLQSAHDKTLKHINRGHDFASYE 168

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
                AR    ++   LI  LP +   +    LQR +   VD L L+ L I +G    K+
Sbjct: 169 KVCKKARQRGIKVCTHLIIGLPNEGCAENVDSLQRVIEIGVDGLKLHPLHIVRGATMAKV 228

Query: 219 HKDGDL 224
            + G +
Sbjct: 229 WQRGRI 234


>gi|300814494|ref|ZP_07094755.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511412|gb|EFK38651.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 351

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISS 73
           N + ++V    C   C +C+     ++   G    I S + E   ++++       ++  
Sbjct: 5   NIIPIFVPHLGCPLDCCFCN-----QKKITGVSTDISSDIVEKTILEYLSYFKRKDNVEV 59

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNR 132
            F+GG   ++   +NI   L  +A  +     V  I +   P  ++ +     +K GV+ 
Sbjct: 60  AFYGGSFTAI--DKNIQSELLSVAFKYKKKGLVNNIRLSTRPDCIDTDTLDNLKKFGVDI 117

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           I LGVQSL++  L    R H++     +  L ++   ++    +  LP  + ++
Sbjct: 118 IELGVQSLDDGVLILSNRGHDSKCVQKSSELIKDYGFKLGLQQMIGLPGDSFSK 171


>gi|115641347|ref|XP_001203551.1| PREDICTED: similar to elongation protein 3 homolog, partial
           [Strongylocentrotus purpuratus]
 gi|115658194|ref|XP_796915.2| PREDICTED: similar to elongation protein 3 homolog, partial
           [Strongylocentrotus purpuratus]
          Length = 407

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     K G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 146 IGITIETRPDYCLKRHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQMSK 205

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 206 DAGFKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 265

Query: 223 DLVLPSENVAVDL 235
                  +  VDL
Sbjct: 266 RYKSYPPSTLVDL 278


>gi|157960842|ref|YP_001500876.1| putative radical SAM protein [Shewanella pealeana ATCC 700345]
 gi|157845842|gb|ABV86341.1| conserved hypothetical radical SAM protein [Shewanella pealeana
           ATCC 700345]
          Length = 309

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 11/199 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    +K   E  IQ  L   Q   +L    S    +F   T +  E   +  
Sbjct: 45  CTYCNVASFSHEHKT--ELSIQEQLA--QGRERLPSKSSKYIAYFQAYTSTYDEYLVLKQ 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVNR-ISLGVQSLEEQSLRF 147
             D   ++   S  V + +   P  V     +   GY+  GV+  + LG+QS  + +L+ 
Sbjct: 101 KYDEAIQD---SDIVGLCVGTRPDCVPNEVLELLVGYQNDGVDVWLELGLQSANDATLKK 157

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +     +  AR +  ++   LI  LP +    +   L + L   VD + ++ L
Sbjct: 158 INRGHDFAAYEDTVIRARKLGIKVCTHLILGLPGEAHEDYLQTLDKVLRVGVDGMKIHPL 217

Query: 208 TIEKGTLFYKMHKDGDLVL 226
            I +G+   K  ++  + L
Sbjct: 218 HIVEGSTMAKAWRNNKMSL 236


>gi|313632955|gb|EFR99885.1| radical SAM protein, family [Listeria seeligeri FSL N1-067]
          Length = 321

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        Q
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVKKLQAHNIRICTHIINGLPKETPEMMMETTQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|289434948|ref|YP_003464820.1| radical SAM domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171192|emb|CBH27734.1| radical SAM domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|313637569|gb|EFS02979.1| radical SAM protein, family [Listeria seeligeri FSL S4-171]
          Length = 321

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        Q
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVKKLQAHNIRICTHIINGLPKETPEMMMETTQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|301123783|ref|XP_002909618.1| elongator complex protein 3 [Phytophthora infestans T30-4]
 gi|262100380|gb|EEY58432.1| elongator complex protein 3 [Phytophthora infestans T30-4]
          Length = 541

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 3/131 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  RI +GVQS+ E   R   R H  +       LA++ 
Sbjct: 213 ITIETRPDYCLKPHLHDMLRYGCTRIEIGVQSVYEDVARDTNRGHTVAAVSHCFQLAKDC 272

Query: 168 FPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   L+  LP   M +      E      +  D + LY   + +GT  Y++ K G  
Sbjct: 273 GFKIVAHLMPDLPNMGMERDLAGFREFFENPRFRSDGIKLYPTLVIRGTGLYELWKTGTY 332

Query: 225 VLPSENVAVDL 235
              S    VDL
Sbjct: 333 KNYSPEDLVDL 343


>gi|317058971|ref|ZP_07923456.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684647|gb|EFS21482.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 336

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 55/116 (47%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I +   P  ++ +  +  RK GV  I LG+QSL+E+ LR   R +   + +++I   ++ 
Sbjct: 80  IRLSTRPDYIQKDILEQLRKYGVKAIELGIQSLDEEVLRRSDRFYTEKQVLSSIQQMQSY 139

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +   ++  LP  ++ +    ++  ++   D   +Y   + + T+  K +  G+
Sbjct: 140 GFEVGIQIMVGLPGSSLEKEIKTIKTLIACQPDTARIYPTLVLEDTILEKQYHQGE 195


>gi|18310699|ref|NP_562633.1| radical SAM domain protein [Clostridium perfringens str. 13]
 gi|18145380|dbj|BAB81423.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 357

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 22/220 (10%)

Query: 19  LGVYVHWPFCVKKCPYCD------FNSHV---RRYKVGQENFIQSFL---TEMQWMRQLT 66
           + ++V    C   C +C+       N  +    +YK  QEN + S     T  +++  + 
Sbjct: 8   IPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYK--QENKVNSDFVRKTIEEYIETIG 65

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVE---VNNF 122
               I  + F GGT + I+      +L  +AK +     ++ I +   P  ++   +++ 
Sbjct: 66  EGDRILEVSFFGGTFTAIDINKQRELL-AVAKEYKDKKIIDYIRLSTRPDYIDEFILDHL 124

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           + Y+   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 125 KSYK---VDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           T  +     + ++    D   +Y     K T    M+ +G
Sbjct: 182 TFEKDIETTKESIKMKPDICRIYPALTVKNTPMEDMYLEG 221


>gi|325849067|ref|ZP_08170559.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480312|gb|EGC83375.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 358

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 16/210 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + +++ +  C   C +C+    +  YK  + +EN I+     + +      P+ I+  FF
Sbjct: 8   IPIFIPFLGCPHDCAFCN-QVKITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIA--FF 64

Query: 77  GGG-----TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           GG      T  +I    IAL      K   +     I +   P  +  +     +K  V+
Sbjct: 65  GGSFTGLETDVMISYLEIAL---AYKKKGIID---RIRLSTRPDYINNSILDILKKYEVD 118

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+QSL+ + L    R H+  ++I A  L +    ++   ++  L K +        
Sbjct: 119 VIELGIQSLDNEILNANERGHSREDSIKASKLIKEYGFKLGHQIMPGLYKDSYDSAINTG 178

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++    D + +Y   + K T   K++K+
Sbjct: 179 LESIKMNPDMVRIYPTLVIKDTKLEKLYKE 208


>gi|303235152|ref|ZP_07321772.1| radical SAM protein, TIGR01212 family [Finegoldia magna BVS033A4]
 gi|302493744|gb|EFL53530.1| radical SAM protein, TIGR01212 family [Finegoldia magna BVS033A4]
          Length = 311

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           I++   P  + + + +  ++    +     I LG+Q+   ++L+ + R H  ++ I A  
Sbjct: 114 ISVSTRPDCIAIEHLEILKQLQQEKHVDIIIELGLQTSNNKTLKIINRQHTVADFIRACL 173

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + +    R+   +I ALP   M       +      VD   ++ L I K T+  K +++G
Sbjct: 174 MIKKYGFRICTHVILALPWDDMDDVRETAKLLSVLKVDECKIHSLYIPKHTILAKWYEEG 233

Query: 223 DLVLPS 228
            + L S
Sbjct: 234 KVQLKS 239


>gi|255305713|ref|ZP_05349885.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile ATCC 43255]
          Length = 584

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S YEN    +  N +  Y     C   C YC  +S +   +    + I+S L      + 
Sbjct: 163 SPYENLNPKEYENRIVYYESSRGCPFNCQYC-LSSTIPGLRYFSLDRIKSDL------KA 215

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L   R +S I F   T +    + +A+ I+D + KN    +     + A     ++  F 
Sbjct: 216 LIDAR-VSQIKFIDRTFN--ANRKVAMEIMDFLMKNDNGYTTYHFEVTAYLIDDKMLEFL 272

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALP 180
              K G+ +  +GVQS  E++L  +GR  +    S  +  +   RNI   +  DLI  LP
Sbjct: 273 ADCKEGLFQFEIGVQSTNEKTLDAVGRRDDFKKLSHVVQTVASYRNIHQHL--DLIAGLP 330

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +    +E       +  ++HL L  L + KGT
Sbjct: 331 YEDYKSFENSFNDVFNLGIEHLQLGFLKMIKGT 363


>gi|297617465|ref|YP_003702624.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145302|gb|ADI02059.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 365

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 1/161 (0%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F+GG   SL   Q +   L  +           I +   P ++ V   +   + GV  + 
Sbjct: 62  FYGGSFTSL-PVQVMEGYLKAVQPYLATGKVASIRVSTRPDAISVEVLRLLIEHGVTTVE 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+ + L    R +   +   A  L R     +   L+  LPK T  +     +  
Sbjct: 121 LGVQSLDPEVLACAERGYTGRQVWEAAGLIRKHGLALGIQLMIGLPKDTREKDLATTRDV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +      + +Y   + KGT  ++M + G     S   AVD+
Sbjct: 181 IKMKPLMVRIYPTLVLKGTRLHQMWEQGLYSPLSMEEAVDI 221


>gi|219667392|ref|YP_002457827.1| hypothetical protein Dhaf_1335 [Desulfitobacterium hafniense DCB-2]
 gi|219537652|gb|ACL19391.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
          Length = 328

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/114 (23%), Positives = 52/114 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS+ ++++ ++GR H   + +  +   R    R+   +IY LP +T+       Q
Sbjct: 158 VELGLQSIHDRTMEWVGRGHTFEDFLQGLDKLRRRNIRVCTHMIYGLPGETLEDMFGSAQ 217

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 V  + L+ L + KGT    +++     L S++  + L   T  I  A 
Sbjct: 218 TLAKLDVQGVKLHLLHVLKGTPLADIYEQSPFPLLSQDEYIHLICDTLEILPAQ 271


>gi|332163060|ref|YP_004299637.1| hypothetical protein YE105_C3440 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667290|gb|ADZ43934.1| hypothetical protein YE105_C3440 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862732|emb|CBX72874.1| uncharacterized protein yhcC [Yersinia enterocolitica W22703]
          Length = 300

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 7/167 (4%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++ +  +A+   V   V    +  P +V +    GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAV-LGLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEEQAQCMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G++  K  + G L      +A++ Y LT
Sbjct: 202 KVVATGVDGIKLHPLHIVEGSIMAKAWRAGRL----PELALEDYVLT 244


>gi|302897527|ref|XP_003047642.1| histone acetyltransferase [Nectria haematococca mpVI 77-13-4]
 gi|256728573|gb|EEU41929.1| histone acetyltransferase [Nectria haematococca mpVI 77-13-4]
          Length = 567

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 228 VGITIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAK 287

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 288 DAGYKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 347

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 348 RYQNYTPNGLIDL 360


>gi|332292317|ref|YP_004430926.1| RNA modification enzyme, MiaB family [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170403|gb|AEE19658.1| RNA modification enzyme, MiaB family [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 483

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 37/269 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C     V  +  G+E     QS L E+Q + +       L G    S +++GG
Sbjct: 179 CDNMCTFC-----VVPFTRGRERSRDPQSILEEVQDLAEKGFKEITLLGQNVDSYLWYGG 233

Query: 79  GTPSLIEPQ---------NIALILDGIAKNWTVSSNVEITIE-ANPS--SVEVNNFQGYR 126
           G     +           N A ++D +AK       + I    +NP   +++V       
Sbjct: 234 GLKKDFDKASEMAKATAVNFAQLMDTVAK---AQPKMRIRFSTSNPQDMTLDVIEVMAKH 290

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTM 184
           K   N I L VQS  ++ L+ + R H  +E    I   +N+ P   +S D+I   P +T 
Sbjct: 291 KNVCNYIHLPVQSGSDRILQLMNRQHTVAEYKTLIDNIKNLIPHIGISQDMITGFPTETE 350

Query: 185 T--QWEMELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQS 241
              Q  ++L   + Y  D   ++  +   GT+   KM  D  L +    +  D+ +L ++
Sbjct: 351 EDHQGTLDLINYVKY--DFGFMFYYSERPGTMAERKMEDDIPLAIKKRRLQ-DVIDLQRA 407

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYW 270
           I+  + L   + +    +  ES  N + W
Sbjct: 408 ISRDNLLRYQDQTVEILIEKESKKNKDEW 436


>gi|302379508|ref|ZP_07267994.1| radical SAM protein, TIGR01212 family [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312685|gb|EFK94680.1| radical SAM protein, TIGR01212 family [Finegoldia magna
           ACS-171-V-Col3]
          Length = 311

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           I++   P  + + + +  ++    +     I LG+Q+   ++L+ + R H  ++ I A  
Sbjct: 114 ISVSTRPDCIAIEHLEILKQLQQEKHVDIIIELGLQTSNNKTLKIINRQHTVADFIRACL 173

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + +    R+   +I ALP   M       +      VD   ++ L I K T+  K +++G
Sbjct: 174 IIKKYGFRICTHVILALPWDDMDDVRETAKLLSVLKVDECKIHSLYIPKHTILAKWYEEG 233

Query: 223 DLVLPS 228
            + L S
Sbjct: 234 KVQLKS 239


>gi|210630955|ref|ZP_03296700.1| hypothetical protein COLSTE_00585 [Collinsella stercoris DSM 13279]
 gi|210160270|gb|EEA91241.1| hypothetical protein COLSTE_00585 [Collinsella stercoris DSM 13279]
          Length = 663

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 5/144 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P +V        R+ G  ++ +GVQSL+++ L   GR    +    A  L R
Sbjct: 300 VGLVIETRPDAVTPAALTTIRRLGCTKVQMGVQSLDQEVLNANGRGMGVARIQEAFELLR 359

Query: 166 ----NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                I      +L  + P++    +E  L R   +  D + LY   + +G      ++ 
Sbjct: 360 VFGFKIHAHAMANLFGSTPERDKRDYE-RLVRERPFQPDEIKLYPCALIEGAQLCACYER 418

Query: 222 GDLVLPSENVAVDLYNLTQSITSA 245
           G     SE+  +D+     + T A
Sbjct: 419 GTWRPYSEDELLDVLVSDVAATPA 442


>gi|147669231|ref|YP_001214049.1| ELP3 family histone acetyltransferase [Dehalococcoides sp. BAV1]
 gi|146270179|gb|ABQ17171.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. BAV1]
          Length = 459

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P        Q     G  R+ LGVQ L++   + + R H  ++   A  L R
Sbjct: 129 VGLCIETRPDICGKAEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADVAEATCLLR 188

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               ++ +  +  LP  +  + ++ L R +     +  D L LY   + +GT+  +  K+
Sbjct: 189 EYGLKVHYHWMPGLPGSS-PEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKE 247

Query: 222 G 222
           G
Sbjct: 248 G 248


>gi|126698292|ref|YP_001087189.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile 630]
 gi|115249729|emb|CAJ67546.1| putative radical SAM domain-containing protein [Clostridium
           difficile]
          Length = 584

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S YEN    +  N +  Y     C   C YC  +S +   +    + I+S L      + 
Sbjct: 163 SPYENLNPKEYENRIVYYESSRGCPFNCQYC-LSSTIPGLRYFSLDRIKSDL------KA 215

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L   R +S I F   T +    + +A+ I+D + KN    +     + A     ++  F 
Sbjct: 216 LIDAR-VSQIKFIDRTFN--ANRKVAMEIMDFLMKNDNGYTTYHFEVTAYLIDDKMLEFL 272

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALP 180
              K G+ +  +GVQS  E++L  +GR  +    S  +  +   RNI   +  DLI  LP
Sbjct: 273 ADCKEGLFQFEIGVQSTNEKTLDAVGRRDDFKKLSHVVQTVASYRNIHQHL--DLIAGLP 330

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +    +E       +  ++HL L  L + KGT
Sbjct: 331 YEDYKSFENSFNDVFNLGIEHLQLGFLKMIKGT 363


>gi|302780793|ref|XP_002972171.1| hypothetical protein SELMODRAFT_412711 [Selaginella moellendorffii]
 gi|300160470|gb|EFJ27088.1| hypothetical protein SELMODRAFT_412711 [Selaginella moellendorffii]
          Length = 469

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P   +  + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 227 IGLTIETRPDYCQSPHLRQMLSYGCRRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAK 286

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++   P   M + +ME  R      S+  D L +Y   + +GT  Y++ K 
Sbjct: 287 DAGFKVVAHMMPNFPNVDM-ERDMESFRDFFENPSFRADGLKIYPTLVIRGTGLYELWKT 345

Query: 222 G 222
           G
Sbjct: 346 G 346


>gi|255099828|ref|ZP_05328805.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-63q42]
          Length = 584

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S YEN    +  N +  Y     C   C YC  +S +   +    + I+S L      + 
Sbjct: 163 SPYENLNPKEYENRIVYYESSRGCPFNCQYC-LSSTIPGLRYFSLDRIKSDL------KA 215

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L   R +S I F   T +    + +A+ I+D + KN    +     + A     ++  F 
Sbjct: 216 LIDAR-VSQIKFIDRTFN--ANRKVAMEIMDFLMKNDNGYTTYHFEVTAYLIDDKMLEFL 272

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALP 180
              K G+ +  +GVQS  E++L  +GR  +    S  +  +   RNI   +  DLI  LP
Sbjct: 273 ADCKEGLFQFEIGVQSTNEKTLDAVGRRDDFKKLSHVVQTVASYRNIHQHL--DLIAGLP 330

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +    +E       +  ++HL L  L + KGT
Sbjct: 331 YEDYKSFENSFNDVFNLGIEHLQLGFLKMIKGT 363


>gi|294494915|ref|YP_003541408.1| histone acetyltransferase, ELP3 family [Methanohalophilus mahii DSM
           5219]
 gi|292665914|gb|ADE35763.1| histone acetyltransferase, ELP3 family [Methanohalophilus mahii DSM
           5219]
          Length = 543

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 9/144 (6%)

Query: 105 NVEITIEANP---SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           N+ IT E  P   S VEV+    +   G  ++ +GVQS+ +  L  + R H+ ++   A 
Sbjct: 213 NIGITYETRPDWTSPVEVDRLLNF---GATKVEIGVQSVYDFVLSRMRRGHSVADTAEAN 269

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKM 218
            + R+   ++ F ++  LP     +     ++  S   +  D L +Y   + +GT   KM
Sbjct: 270 RILRDSGLKVGFHMMPRLPGSDNERDMRGFKKLFSDSRFMPDFLKIYPTLVTEGTELEKM 329

Query: 219 HKDGDLVLPSENVAVDLYNLTQSI 242
            + G      +  AV+L    ++I
Sbjct: 330 WRAGKYDPLYDEEAVELLADIKAI 353


>gi|224438829|ref|ZP_03659666.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313145153|ref|ZP_07807346.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313130184|gb|EFR47801.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
          Length = 192

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 25/130 (19%)

Query: 234 DLYNLTQSITSAHGLHAYEISNH---SFLGAESL---------HNLNYWRYGDYIGIGPG 281
           D     + +    G   YE+SN+   S LG +S          HNL YW+  +YIG G G
Sbjct: 20  DFCFFARELLEKAGFSQYEVSNYAKDSKLGVDSKPNGDSKQCKHNLGYWQGREYIGCGAG 79

Query: 282 AHSRVKVGSHRVAISIEKHPE--SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
           A  R+   S+R    +  +P+  +++K  RK    +VE   LS      E +M+GLR   
Sbjct: 80  AVGRL---SNR---RLRAYPQLANYIKTPRKR---LVEA--LSQRDLCMENIMLGLRCAV 128

Query: 340 GISVKDWEML 349
           G+ +   E L
Sbjct: 129 GVKMSVLEEL 138


>gi|254974329|ref|ZP_05270801.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-66c26]
 gi|255091725|ref|ZP_05321203.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile CIP 107932]
 gi|255313453|ref|ZP_05355036.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-76w55]
 gi|255516141|ref|ZP_05383817.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-97b34]
 gi|255649237|ref|ZP_05396139.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-37x79]
 gi|260682410|ref|YP_003213695.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile CD196]
 gi|260686009|ref|YP_003217142.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile R20291]
 gi|306519339|ref|ZP_07405686.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-32g58]
 gi|260208573|emb|CBA61259.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile CD196]
 gi|260212025|emb|CBE02579.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile R20291]
          Length = 584

 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S YEN    +  N +  Y     C   C YC  +S +   +    + I+S L      + 
Sbjct: 163 SPYENLNPKEYENRIVYYESSRGCPFNCQYC-LSSTIPGLRYFSLDRIKSDL------KA 215

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L   R +S I F   T +    + +A+ I+D + KN    +     + A     ++  F 
Sbjct: 216 LIDAR-VSQIKFIDRTFN--ANRKVAMEIMDFLMKNDNGYTTYHFEVTAYLIDDKMLEFL 272

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALP 180
              K G+ +  +GVQS  E++L  +GR  +    S  +  +   RNI   +  DLI  LP
Sbjct: 273 ADCKEGLFQFEIGVQSTNEKTLDAVGRRDDFKKLSHVVQTVASYRNIHQHL--DLIAGLP 330

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +    +E       +  ++HL L  L + KGT
Sbjct: 331 YEDYKSFENSFNDVFNLGIEHLQLGFLKMIKGT 363


>gi|169342660|ref|ZP_02863701.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|169299166|gb|EDS81236.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
          Length = 357

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 10/177 (5%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-I 108
           NF++  + E  ++  +     I  + F GGT + I+      +L  +AK +     ++ I
Sbjct: 51  NFVRKTIEE--YIETIGEGDRILEVSFFGGTFTAIDINKQRELL-AVAKEYKDKKIIDYI 107

Query: 109 TIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            +   P  ++   +++ + Y+   V+ I LGVQSL+++ L   GR H   E + A  L +
Sbjct: 108 RLSTRPDYIDEFILDHLKSYK---VDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIK 164

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                +   ++  LP+ T  +     + ++    D   +Y     K T    M+ +G
Sbjct: 165 EYGFTLGHQIMVGLPEDTFEKDIETTKESIKMKPDICRIYPALTVKNTPMEDMYLEG 221


>gi|57234575|ref|YP_181354.1| ELP3 family histone acetyltransferase [Dehalococcoides ethenogenes
           195]
 gi|57225023|gb|AAW40080.1| histone acetyltransferase, ELP3 family [Dehalococcoides ethenogenes
           195]
          Length = 459

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 87/243 (35%), Gaps = 33/243 (13%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLT---- 66
           T  G   + V      C  KC YC  F +  + Y       +++   E Q  RQ+     
Sbjct: 7   TISGVTPVAVMTKPLPCPGKCVYCPTFEATPQSYTPESPAVLRAKSCEYQAYRQVALRLR 66

Query: 67  -------GPRSISSIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVE----------- 107
                      +  I  GG   +         I D   A N  V+S++E           
Sbjct: 67  IIQDMGHPTDKVELIIMGGTFLAADTAYQYGFIKDCYDALNGVVASSLEEAKAINETAQH 126

Query: 108 ----ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
               + IE  P        Q     G  R+ LGVQ L++   + + R H  ++   +  L
Sbjct: 127 RCVGLCIETRPDICGEAEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADVAESTRL 186

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMH 219
            R    ++ +  +  LP  +  + ++ L R +     +  D L LY   + +GT+  +  
Sbjct: 187 LREYGLKVHYHWMPGLPGSS-PEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEEWW 245

Query: 220 KDG 222
           K+G
Sbjct: 246 KEG 248


>gi|328769009|gb|EGF79054.1| hypothetical protein BATDEDRAFT_90184 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 555

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 3/120 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA+
Sbjct: 223 IGITIETRPDYCLKPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFQLAK 282

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L LY   + +GT  Y++ + G
Sbjct: 283 DTGYKVVVHMMPDLPNVGMERDLEQFKEYFENPAFRSDGLKLYPTLVIRGTGLYELWRTG 342


>gi|212636543|ref|YP_002313068.1| Fe-S oxidoreductase [Shewanella piezotolerans WP3]
 gi|212558027|gb|ACJ30481.1| Fe-S oxidoreductase, putative [Shewanella piezotolerans WP3]
          Length = 294

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 11/190 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    +K   E  IQ  LT  Q   +L+   S    +F   T +  E   +  
Sbjct: 33  CTYCNVASFSHEHKT--ELSIQEQLT--QGRERLSTKPSKYIAYFQAYTSTYDEYLVLKQ 88

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRF 147
             D   K   +   V + +   P  V    +     Y++ G++  + LG+Q+   ++L+ 
Sbjct: 89  KYDEAIKGTDI---VGLCVGTRPDCVPDEVIELLAQYQQLGLDVWLELGLQTANNKTLKR 145

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+       +  AR    ++   LI  LP +  T +   L + L   VD L L+ L
Sbjct: 146 INRGHDFDVYADTVKRARERGIKVCTHLILGLPGEGHTDYLETLNKVLDAGVDGLKLHPL 205

Query: 208 TIEKGTLFYK 217
            I +G+   K
Sbjct: 206 HIVEGSTMAK 215


>gi|170765775|ref|ZP_02900586.1| radical SAM protein, TIGR01212 family [Escherichia albertii
           TW07627]
 gi|170124921|gb|EDS93852.1| radical SAM protein, TIGR01212 family [Escherichia albertii
           TW07627]
          Length = 320

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 153 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARERGLKVCAHLIVGLPGEGHAECLQTLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           R +   VD + L+ L I KG++  K  + G L
Sbjct: 213 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL 244


>gi|15642368|ref|NP_232001.1| hypothetical protein VC2371 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121588209|ref|ZP_01677953.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727483|ref|ZP_01680601.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675264|ref|YP_001217874.1| hypothetical protein VC0395_A1950 [Vibrio cholerae O395]
 gi|153819126|ref|ZP_01971793.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822760|ref|ZP_01975427.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227082495|ref|YP_002811046.1| hypothetical protein VCM66_2294 [Vibrio cholerae M66-2]
 gi|229507563|ref|ZP_04397068.1| hypothetical protein VCF_002792 [Vibrio cholerae BX 330286]
 gi|229512241|ref|ZP_04401720.1| hypothetical protein VCE_003653 [Vibrio cholerae B33]
 gi|229519377|ref|ZP_04408820.1| hypothetical protein VCC_003407 [Vibrio cholerae RC9]
 gi|229607069|ref|YP_002877717.1| hypothetical protein VCD_001978 [Vibrio cholerae MJ-1236]
 gi|254849493|ref|ZP_05238843.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298500267|ref|ZP_07010072.1| radical SAM protein [Vibrio cholerae MAK 757]
 gi|9656941|gb|AAF95514.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547551|gb|EAX57654.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630151|gb|EAX62553.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126510316|gb|EAZ72910.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519705|gb|EAZ76928.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317147|gb|ABQ21686.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227010383|gb|ACP06595.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014266|gb|ACP10476.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229344066|gb|EEO09041.1| hypothetical protein VCC_003407 [Vibrio cholerae RC9]
 gi|229352206|gb|EEO17147.1| hypothetical protein VCE_003653 [Vibrio cholerae B33]
 gi|229355068|gb|EEO19989.1| hypothetical protein VCF_002792 [Vibrio cholerae BX 330286]
 gi|229369724|gb|ACQ60147.1| hypothetical protein VCD_001978 [Vibrio cholerae MJ-1236]
 gi|254845198|gb|EET23612.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297540960|gb|EFH77014.1| radical SAM protein [Vibrio cholerae MAK 757]
          Length = 316

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|331659498|ref|ZP_08360440.1| radical SAM protein, family [Escherichia coli TA206]
 gi|315297923|gb|EFU57193.1| radical SAM protein family [Escherichia coli MS 16-3]
 gi|331054080|gb|EGI26109.1| radical SAM protein, family [Escherichia coli TA206]
          Length = 309

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+   ++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHNKTLHRINRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|296104932|ref|YP_003615078.1| putative radical SAM protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059391|gb|ADF64129.1| putative radical SAM protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 327

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++L  + R H+ +       LAR    ++   LI  LP +        L+
Sbjct: 156 LELGLQSAHDKTLHRINRGHDFACYQRTTRLARERGLKVCTHLIVGLPGEGQQHGLETLE 215

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + +   VD + L+ L I +G++  K  + G L      +A+D Y +T
Sbjct: 216 KVVETGVDGIKLHPLHIVQGSIMAKAWQAGRL----NGIALDEYTVT 258


>gi|224499243|ref|ZP_03667592.1| hypothetical protein LmonF1_05932 [Listeria monocytogenes Finland
           1988]
          Length = 321

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|168214194|ref|ZP_02639819.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|182625853|ref|ZP_02953619.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
 gi|170714324|gb|EDT26506.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|177908887|gb|EDT71379.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
          Length = 357

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 22/220 (10%)

Query: 19  LGVYVHWPFCVKKCPYCD------FNSHV---RRYKVGQENFIQSFL---TEMQWMRQLT 66
           + ++V    C   C +C+       N  +    +YK  QEN + S     T  +++  + 
Sbjct: 8   IPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYK--QENKVNSDFVRKTIEEYIETIG 65

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVE---VNNF 122
               I  + F GGT + I+      +L  +AK +     ++ I +   P  ++   +++ 
Sbjct: 66  EGDRILEVSFFGGTFTAIDINKQRELL-AVAKEYKDKKIIDYIRLSTRPDYIDEFILDHL 124

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           + Y+   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 125 KSYK---VDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           T  +     + ++    D   +Y     K T    M+ +G
Sbjct: 182 TFEKDIETTRESIKMKPDICRIYPALTVKNTPMEDMYLEG 221


>gi|86131573|ref|ZP_01050171.1| tRNA-i(6)A37 modification enzyme MiaB [Dokdonia donghaensis MED134]
 gi|85818018|gb|EAQ39186.1| tRNA-i(6)A37 modification enzyme MiaB [Dokdonia donghaensis MED134]
          Length = 484

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 105/267 (39%), Gaps = 33/267 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C     V  +  G+E     QS L E+Q +         L G    S +++GG
Sbjct: 179 CDNMCTFC-----VVPFTRGRERSRDPQSILEEVQDLANRGFKEITLLGQNVDSYLWYGG 233

Query: 79  GTPSLIEPQ---------NIALILDGIAKNWTVSSNVEITIE-ANPS--SVEVNNFQGYR 126
           G     +           N A ++D +AK       + I    +NP   +++V       
Sbjct: 234 GLKKDFDKASEMAKATAVNFAQLMDMVAK---AQPKMRIRFSTSNPQDMTLDVIEVMASH 290

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTM 184
           K   N I L VQS  ++ L+ + R H  +E    I   +N+ P   +S D+I   P +T 
Sbjct: 291 KNICNYIHLPVQSGSDRILKLMNRQHTVAEYKTLIDNIKNLIPDIGISQDMITGFPTETE 350

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +  L        D+  ++  +   GTL   KM  D  L +    +  D+ +L + I+
Sbjct: 351 EDHQGTLDLIDYVKYDYGFMFYYSERPGTLAERKMEDDIPLEIKKRRLQ-DVIDLQREIS 409

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYW 270
             + L   + +    +  ES  N + W
Sbjct: 410 RKNLLRYQDQTIEVLIEKESKKNKDEW 436


>gi|320183045|gb|EFW57910.1| tRNA-i(6)A37 methylthiotransferase [Shigella flexneri CDC 796-83]
          Length = 474

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPSETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|221482322|gb|EEE20677.1| Radical SAM domain-containing protein, putative [Toxoplasma gondii
           GT1]
          Length = 984

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 20/177 (11%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +     +  R+ G  R+ LG+Q +E   L F+ R     +A+ AI L +
Sbjct: 393 IGLTLETRPDFINRFEIRKLRRFGCTRVQLGLQHVENDVLNFINRGCQRQDAVKAIRLLK 452

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQR------ALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP  T+   E +L+       +     D   LY   +   +   + +
Sbjct: 453 DAGYKVDIHIMPDLPSSTV---ERDLRMFFYLLGSSDLQADQWKLYPCEVTPFSEIERWY 509

Query: 220 KDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAY--------EISNHSFLGAESLHNL 267
            +G  V  +E +   +L +L   + +A  +H +        +I N S +   ++ NL
Sbjct: 510 SEGRFVPYAEKDGGKELVDLLLRVKAA--VHPWIRLNRVVRDIPNQSIIAGNNITNL 564


>gi|255746950|ref|ZP_05420895.1| hypothetical protein VCH_003349 [Vibrio cholera CIRS 101]
 gi|262161506|ref|ZP_06030616.1| hypothetical protein VIG_002758 [Vibrio cholerae INDRE 91/1]
 gi|262168358|ref|ZP_06036055.1| hypothetical protein VIJ_001541 [Vibrio cholerae RC27]
 gi|255735352|gb|EET90752.1| hypothetical protein VCH_003349 [Vibrio cholera CIRS 101]
 gi|262023250|gb|EEY41954.1| hypothetical protein VIJ_001541 [Vibrio cholerae RC27]
 gi|262028817|gb|EEY47471.1| hypothetical protein VIG_002758 [Vibrio cholerae INDRE 91/1]
          Length = 312

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 142 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 202 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 244


>gi|238789736|ref|ZP_04633518.1| hypothetical protein yfred0001_28850 [Yersinia frederiksenii ATCC
           33641]
 gi|238722095|gb|EEQ13753.1| hypothetical protein yfred0001_28850 [Yersinia frederiksenii ATCC
           33641]
          Length = 309

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++ +  +A+   V   V    +  P +V ++   GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDQAQGMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + ++  VD L L+ L I +G+   K  + G L
Sbjct: 202 KVVATGVDGLKLHPLHIVEGSTMAKAWRAGRL 233


>gi|319956422|ref|YP_004167685.1| hypothetical protein Nitsa_0668 [Nitratifractor salsuginis DSM
           16511]
 gi|319418826|gb|ADV45936.1| conserved hypothetical protein [Nitratifractor salsuginis DSM
           16511]
          Length = 325

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 45/93 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS+ +++LR + R H+A     AI  A++   ++   LI+ LP +         +
Sbjct: 169 IEYGIQSIYDETLRRINRGHDALNVEQAIKKAKDKGLKVCGHLIFGLPGEDKQMMLDSAK 228

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            A  + +D +  + L + K TL    +K G+  
Sbjct: 229 AAYDWGIDSVKYHPLYVVKQTLLANEYKRGEFT 261


>gi|284165974|ref|YP_003404253.1| histone acetyltransferase, ELP3 family [Haloterrigena turkmenica
           DSM 5511]
 gi|284015629|gb|ADB61580.1| histone acetyltransferase, ELP3 family [Haloterrigena turkmenica
           DSM 5511]
          Length = 553

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 4/148 (2%)

Query: 92  ILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           + D I +N T    N+  T E  P   +          G  ++ +GVQ+  E+  R + R
Sbjct: 213 VEDVITENETADVRNIGTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHR 272

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR---ALSYAVDHLSLYQL 207
            H   E++ A    R+   ++ F ++   P  +      + +R   A ++  D+L +Y  
Sbjct: 273 GHGVQESMEANQRLRDSAFKVGFHMMPGQPGMSKEMCLEDFRRIFEAEAWKPDYLKIYPT 332

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            I +GT  Y    +G+      + A +L
Sbjct: 333 LIVRGTATYDWWHNGEFDPLDNDEAAEL 360


>gi|16803701|ref|NP_465186.1| hypothetical protein lmo1661 [Listeria monocytogenes EGD-e]
 gi|224503673|ref|ZP_03671980.1| hypothetical protein LmonFR_14405 [Listeria monocytogenes FSL
           R2-561]
 gi|16411097|emb|CAC99739.1| lmo1661 [Listeria monocytogenes EGD-e]
          Length = 321

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|313608423|gb|EFR84365.1| radical SAM protein, family [Listeria monocytogenes FSL F2-208]
          Length = 321

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|156547185|ref|XP_001604089.1| PREDICTED: similar to CG15433-PA [Nasonia vitripennis]
          Length = 469

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L++
Sbjct: 139 IGITIETRPDYCLKKHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLSK 198

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 199 DAGFKVIAHMMPDLPNVDIERDIEQF-IEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 257

Query: 222 GDLVLPSENVAVDL 235
           G       +V VDL
Sbjct: 258 GRYKSYPPSVLVDL 271


>gi|322700274|gb|EFY92030.1| histone acetyltransferase [Metarhizium acridum CQMa 102]
          Length = 571

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 230 VGITIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAK 289

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 290 DAGFKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 349

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 350 RYQNYTPNGLIDL 362


>gi|255027474|ref|ZP_05299460.1| hypothetical protein LmonocytFSL_16003 [Listeria monocytogenes FSL
           J2-003]
 gi|284802053|ref|YP_003413918.1| hypothetical protein LM5578_1808 [Listeria monocytogenes 08-5578]
 gi|284995195|ref|YP_003416963.1| hypothetical protein LM5923_1760 [Listeria monocytogenes 08-5923]
 gi|315282618|ref|ZP_07870988.1| radical SAM protein, family [Listeria marthii FSL S4-120]
 gi|284057615|gb|ADB68556.1| hypothetical protein LM5578_1808 [Listeria monocytogenes 08-5578]
 gi|284060662|gb|ADB71601.1| hypothetical protein LM5923_1760 [Listeria monocytogenes 08-5923]
 gi|313613729|gb|EFR87503.1| radical SAM protein, family [Listeria marthii FSL S4-120]
          Length = 321

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|153840445|ref|ZP_01993112.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
 gi|149745893|gb|EDM57023.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
          Length = 262

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       LQ
Sbjct: 85  LELGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKETRDDNIETLQ 144

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 145 KVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAI 187


>gi|291085698|ref|ZP_06353781.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citrobacter youngae ATCC
           29220]
 gi|291070181|gb|EFE08290.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citrobacter youngae ATCC
           29220]
          Length = 490

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 18/172 (10%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
           + G T S  +   +   +DGI +  +T S  +E T +     VEV     YR     V+ 
Sbjct: 227 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDI----VEV-----YRDTPELVSF 277

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEME 190
           + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E  
Sbjct: 278 LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQT 337

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 338 MKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 385


>gi|255654758|ref|ZP_05400167.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-23m63]
 gi|296449504|ref|ZP_06891281.1| radical SAM domain protein [Clostridium difficile NAP08]
 gi|296878173|ref|ZP_06902188.1| radical SAM domain protein [Clostridium difficile NAP07]
 gi|296261568|gb|EFH08386.1| radical SAM domain protein [Clostridium difficile NAP08]
 gi|296430926|gb|EFH16758.1| radical SAM domain protein [Clostridium difficile NAP07]
          Length = 584

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 5/125 (4%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           I+D + KN    +     + A     ++  F    K G+ +  +GVQS  E++L  +GR 
Sbjct: 241 IMDFLMKNDNGYTTYHFEVTAYLIDDKMLEFLADCKEGLFQFEIGVQSTNEKTLDAVGRR 300

Query: 152 HN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            +    S  +  +   RNI   +  DLI  LP +    +E       +  ++HL L  L 
Sbjct: 301 DDFKKLSHVVQTVASYRNIHQHL--DLIAGLPYEDYKSFENSFNDVFNLGIEHLQLGFLK 358

Query: 209 IEKGT 213
           + KGT
Sbjct: 359 MIKGT 363


>gi|237842067|ref|XP_002370331.1| elongator complex protein 3, putative [Toxoplasma gondii ME49]
 gi|211967995|gb|EEB03191.1| elongator complex protein 3, putative [Toxoplasma gondii ME49]
 gi|221502781|gb|EEE28495.1| Radical SAM domain-containing protein, putative [Toxoplasma gondii
           VEG]
          Length = 999

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 20/177 (11%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +     +  R+ G  R+ LG+Q +E   L F+ R     +A+ AI L +
Sbjct: 408 IGLTLETRPDFINRFEIRKLRRFGCTRVQLGLQHVENDVLNFINRGCQRQDAVKAIRLLK 467

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQR------ALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP  T+   E +L+       +     D   LY   +   +   + +
Sbjct: 468 DAGYKVDIHIMPDLPSSTV---ERDLRMFFYLLGSSDLQADQWKLYPCEVTPFSEIERWY 524

Query: 220 KDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAY--------EISNHSFLGAESLHNL 267
            +G  V  +E +   +L +L   + +A  +H +        +I N S +   ++ NL
Sbjct: 525 SEGRFVPYAEKDGGKELVDLLLRVKAA--VHPWIRLNRVVRDIPNQSIIAGNNITNL 579


>gi|152972137|ref|YP_001337283.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956986|gb|ABR79016.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 310

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP ++       L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCTHLIVGLPGESQGHCLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I KG++  K  + G L    + + ++ Y +T
Sbjct: 202 QVVATGVDGIKLHPLHIVKGSIMAKAWQAGRL----DGIELEAYTVT 244


>gi|224368197|ref|YP_002602360.1| radical SAM domain family protein [Desulfobacterium autotrophicum
           HRM2]
 gi|223690913|gb|ACN14196.1| radical SAM domain family protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 359

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 79/200 (39%), Gaps = 10/200 (5%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC +CD    +  RR    +    Q   T   W+      RS+   FFGG    L  
Sbjct: 20  CPHKCAFCDQSIITSERRALPHETQIRQQVET---WLGYRGDRRSVELAFFGGNFLGLTP 76

Query: 86  PQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +   L+   I +   +   +  +     P ++   +     +  ++ + +GVQS+++Q 
Sbjct: 77  HETRTLL--QITQQLILEKKIHSVRCSTRPDTIHEQSLDMASQFTLDTVEIGVQSMDDQV 134

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLS 203
           L    R H A + I A  L  +        ++  LP  T  +  +E  R ++      + 
Sbjct: 135 LLKANRGHTAQDTIRAAKLLDDYKINKGMQMMVGLPGDTPDK-AIETARVIADLKPAFVR 193

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           +Y L + K +L +  +  G+
Sbjct: 194 IYPLLVLKNSLVHHWYARGE 213


>gi|254226156|ref|ZP_04919752.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621324|gb|EAZ49662.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|289432498|ref|YP_003462371.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. GT]
 gi|288946218|gb|ADC73915.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. GT]
          Length = 459

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P        Q     G  R+ LGVQ L++   + + R H  ++   A  L R
Sbjct: 129 VGLCIETRPDICGKAEIQRMIDFGTTRVELGVQMLDDDIYKMVERGHTVADVAEATCLLR 188

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               ++ +  +  LP  +  + ++ L R +     +  D L LY   + +GT+  +  K+
Sbjct: 189 EYGLKVHYHWMPGLPGSS-PEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKE 247

Query: 222 G 222
           G
Sbjct: 248 G 248


>gi|110800781|ref|YP_696404.1| radical SAM domain-containing protein [Clostridium perfringens ATCC
           13124]
 gi|168210650|ref|ZP_02636275.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
 gi|110675428|gb|ABG84415.1| radical SAM domain protein [Clostridium perfringens ATCC 13124]
 gi|170711265|gb|EDT23447.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 357

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 16/217 (7%)

Query: 19  LGVYVHWPFCVKKCPYCD------FNSHV---RRYKVGQENFIQSFL---TEMQWMRQLT 66
           + ++V    C   C +C+       N  +    +YK  QEN + S     T  +++  + 
Sbjct: 8   IPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYK--QENKVNSDFVRKTIEEYIETIG 65

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGY 125
               I  + F GGT + I+      +L  +AK +     ++ I +   P  ++       
Sbjct: 66  EGDRILEVSFFGGTFTAIDINKQRELL-AVAKEYKDKKIIDYIRLSTRPDYIDEFILDHL 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ T  
Sbjct: 125 KSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPEDTFE 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +     + ++    D   +Y     K T    M+ +G
Sbjct: 185 KDIETTRESIKMKPDICRIYPALTVKNTPMEDMYLEG 221


>gi|327484872|gb|AEA79279.1| Predicted Fe-S oxidoreductase [Vibrio cholerae LMA3894-4]
          Length = 312

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 142 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 202 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 244


>gi|116198545|ref|XP_001225084.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88178707|gb|EAQ86175.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 579

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L++
Sbjct: 232 VGITIETRPDYCLQPHLSSMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLSK 291

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q++ E   + ++  D L +Y   + +GT  Y++ + 
Sbjct: 292 DAGFKVVSHMMPDLPNVGMERDLDQFK-EYFESPAFRTDGLKIYPTLVIRGTGLYELWRT 350

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +DL
Sbjct: 351 GRYQNYTPNGLIDL 364


>gi|229528637|ref|ZP_04418027.1| hypothetical protein VCG_001723 [Vibrio cholerae 12129(1)]
 gi|229332411|gb|EEN97897.1| hypothetical protein VCG_001723 [Vibrio cholerae 12129(1)]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|153802020|ref|ZP_01956606.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122430|gb|EAY41173.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|154249044|ref|YP_001409869.1| putative radical SAM protein [Fervidobacterium nodosum Rt17-B1]
 gi|154152980|gb|ABS60212.1| conserved hypothetical radical SAM protein [Fervidobacterium
           nodosum Rt17-B1]
          Length = 293

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS    +L  + R H  +E I A++L +N    +   +I  LP   M    +E  
Sbjct: 131 LDIGLQSANYHTLVKVNRGHTLAEYIYAVNLIKNYGFEVVSHVILNLPGDNMLDV-IESA 189

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + LS   VD + ++ L I +GT+F +M+K G L
Sbjct: 190 KILSALKVDGVKIHSLYIVEGTIFGEMYKSGKL 222


>gi|51245098|ref|YP_064982.1| hypothetical protein DP1246 [Desulfotalea psychrophila LSv54]
 gi|50876135|emb|CAG35975.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 340

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 6/186 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGP-RSISSIFFGGGTPSLI 84
           C  +C +C+  S     +   +   ++  T  +W+ +  L G  R     F+GG    L 
Sbjct: 14  CPHQCLFCNQESITGCAEPKADYGEEAIATIEEWLARESLHGELREREVAFYGGSFTCLP 73

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           E +   L+   + + +     V+ I +   P  +  +  +      V ++ LGVQS+++ 
Sbjct: 74  EEEQARLL--ALVQPYIDRGLVDGIRLSTRPDCISKDIAEFLVAHRVKKVELGVQSMDDG 131

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            LR   R H+A +   AI + +    ++   L+  LP++T   +   L   +    D + 
Sbjct: 132 VLRAAKRGHSALDCRRAIAILQAAGLQVGVQLMAGLPRETTAIFLRGLDEIIGLRPDFVR 191

Query: 204 LYQLTI 209
           LY + +
Sbjct: 192 LYPVVV 197


>gi|322708228|gb|EFY99805.1| histone acetyltransferase [Metarhizium anisopliae ARSEF 23]
          Length = 576

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 235 VGITIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAK 294

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 295 DAGFKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 354

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 355 RYQNYTPNGLIDL 367


>gi|153216222|ref|ZP_01950326.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153828817|ref|ZP_01981484.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|124114409|gb|EAY33229.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|148875693|gb|EDL73828.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|123443917|ref|YP_001007888.1| hypothetical protein YE3734 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090878|emb|CAL13760.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 300

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 7/167 (4%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++ +  +A+   V   V    +  P +V ++   GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEEQAQCMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + +   VD + L+ L I +G++  K  + G L      +A++ Y LT
Sbjct: 202 KVVVTGVDGIKLHPLHIVEGSIMAKAWRAGRL----PELALEDYVLT 244


>gi|310790372|gb|EFQ25905.1| ELP3 family histone acetyltransferase [Glomerella graminicola
           M1.001]
          Length = 575

 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 233 VGITIETRPDYCWQPHLTDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAK 292

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+    +   ++  D L +Y   + +GT  Y++ + 
Sbjct: 293 DAGFKVVSHMMPDLPNVGMERDLDQFREYFENP-AFRTDGLKIYPTLVIRGTGLYELWRT 351

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +DL
Sbjct: 352 GRYQNYTPNGLIDL 365


>gi|262042776|ref|ZP_06015929.1| radical SAM protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039843|gb|EEW40961.1| radical SAM protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 335

 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP ++       L+
Sbjct: 167 LELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLE 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I KG++  K  + G L    + + ++ Y +T
Sbjct: 227 QVVATGVDGIKLHPLHIVKGSIMAKAWQAGRL----DGIELEAYTVT 269


>gi|329997593|ref|ZP_08302863.1| radical SAM protein family [Klebsiella sp. MS 92-3]
 gi|328538969|gb|EGF65021.1| radical SAM protein family [Klebsiella sp. MS 92-3]
          Length = 335

 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP ++       L+
Sbjct: 167 LELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLE 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I KG++  K  + G L    + + ++ Y +T
Sbjct: 227 QVVATGVDGIKLHPLHIVKGSIMAKAWQAGRL----DGIELEAYTVT 269


>gi|253699307|ref|YP_003020496.1| hypothetical protein GM21_0664 [Geobacter sp. M21]
 gi|251774157|gb|ACT16738.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 318

 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           V I++   P S++ +      +   +R   + LG+QS+++  L  + R H+ +E ++A+ 
Sbjct: 120 VGISVGTRPDSIDDDAVALLTELARDRYVCVELGLQSIDDAILTRINRGHSFAEYLSAVD 179

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                   +   LIY  P +  + +    +   S  V  + L+QL   +GT   +M++DG
Sbjct: 180 RLAGRGIDICTHLIYGFPGEKRSGFVKGARLISSLPVTSVKLHQLHAVEGTKLAQMYRDG 239


>gi|262192284|ref|ZP_06050440.1| hypothetical protein VIH_002672 [Vibrio cholerae CT 5369-93]
 gi|262031834|gb|EEY50416.1| hypothetical protein VIH_002672 [Vibrio cholerae CT 5369-93]
          Length = 312

 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 142 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 202 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSI 244


>gi|261216636|ref|ZP_05930917.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
 gi|260921725|gb|EEX88293.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
          Length = 328

 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNI 167
            +E +P  +          +G+ R SLGVQS + +  + + R   A   +  +  L +N 
Sbjct: 17  AVEIDPRRMTPEMAAALAYSGITRASLGVQSFDPKVQKAINRIQTAKTTLETVSSLRKNN 76

Query: 168 FPRMSFDLIYALPKQTMT 185
              ++FDLIY LP QT+ 
Sbjct: 77  IQAINFDLIYGLPHQTVA 94


>gi|254714943|ref|ZP_05176754.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
          Length = 333

 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNI 167
            +E +P  +          +G+ R SLGVQS + +  + + R   A   +  +  L +N 
Sbjct: 22  AVEIDPRRMTPEMAAALAYSGITRASLGVQSFDPKVQKAINRIQTAKTTLETVSSLRKNN 81

Query: 168 FPRMSFDLIYALPKQTMT 185
              ++FDLIY LP QT+ 
Sbjct: 82  IQAINFDLIYGLPHQTVA 99


>gi|229521206|ref|ZP_04410626.1| hypothetical protein VIF_001730 [Vibrio cholerae TM 11079-80]
 gi|229341738|gb|EEO06740.1| hypothetical protein VIF_001730 [Vibrio cholerae TM 11079-80]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSI 248


>gi|289765132|ref|ZP_06524510.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716687|gb|EFD80699.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 280

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 6/181 (3%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T E    ++     +   + GVNRIS+G+Q+   +  + L R ++    +  +   +  
Sbjct: 1   MTFETTLHNLSFEKLKVMEENGVNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKR 60

Query: 168 FPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLV 225
           F  +   D+IY    QT  +   +         D  S Y L I  G+   K   KD  + 
Sbjct: 61  FSGLVCIDIIYNYANQTNEEVLQDANLLAEVGADSASFYSLIIHDGSDISKEREKDKSVY 120

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES---LHNLNYWRYGDYIGIGPGA 282
           + +     +L+NL  S     G    E++  +  G +S   + N N  +    IG+G G 
Sbjct: 121 IYNLERDEELHNLFYSRCIEKGYKLLELTKITN-GRDSYKYIRNNNGLKNLLPIGVGAGG 179

Query: 283 H 283
           H
Sbjct: 180 H 180


>gi|238896720|ref|YP_002921465.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044]
 gi|238549047|dbj|BAH65398.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 335

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP ++       L+
Sbjct: 167 LELGLQTAHDKTLHRINRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLE 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I KG++  K  + G L    + + ++ Y +T
Sbjct: 227 QVVATGVDGIKLHPLHIVKGSIMAKAWQAGRL----DGIELEAYTVT 269


>gi|218658829|ref|ZP_03514759.1| coproporphyrinogen III oxidase [Rhizobium etli IE4771]
          Length = 244

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPR 170
           +NP +      +    +GVNR S+GVQS +    + + R  + ++ +AA+   R +    
Sbjct: 7   SNPRTFTPEMGEALEISGVNRASVGVQSFDPIVQKAINRVQSQAQVMAAVQNLRVHGVDS 66

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           ++FDL++ LP QT+         A++   D L+++
Sbjct: 67  INFDLMFGLPHQTVQSCAESAMAAVAMRPDRLAVF 101


>gi|229514006|ref|ZP_04403468.1| hypothetical protein VCB_001651 [Vibrio cholerae TMA 21]
 gi|229349187|gb|EEO14144.1| hypothetical protein VCB_001651 [Vibrio cholerae TMA 21]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSI 248


>gi|76802078|ref|YP_327086.1| protein acetyltransferase [Natronomonas pharaonis DSM 2160]
 gi|76557943|emb|CAI49527.1| probable protein acetyltransferase [Natronomonas pharaonis DSM
           2160]
          Length = 552

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 6/140 (4%)

Query: 85  EPQNIAL--ILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           +P+++    + D IA+N T +  N+  T E  P   +        + G  ++ +GVQ+  
Sbjct: 202 DPEDVDFRYLEDVIAENETANIRNIGTTFETKPDWCDPEQIDRMLRLGGTKVEVGVQTTY 261

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP---KQTMTQWEMELQRALSYA 198
           E+  R + R H    ++ A    R+   ++ F ++   P   K+   Q   E+     + 
Sbjct: 262 ERINREMHRGHGVQASLDANRRLRDAGFKVGFHMMPGQPGMSKEMCLQDFREIFENADWR 321

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D+L +Y   I + T+ Y M
Sbjct: 322 PDYLKIYPTLIVRDTVTYDM 341


>gi|148265681|ref|YP_001232387.1| putative radical SAM protein [Geobacter uraniireducens Rf4]
 gi|146399181|gb|ABQ27814.1| conserved hypothetical radical SAM protein [Geobacter
           uraniireducens Rf4]
          Length = 319

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 43/93 (46%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS+++  L+ + R H  SE +  ++        +   LIY  P +T   +     
Sbjct: 150 VELGLQSMDDAILKQINRGHTLSEYLNTVNRIAGRGIDICTHLIYGFPGETHAGFLKTAD 209

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              S  V+ L ++QL   +GT    ++ DG  +
Sbjct: 210 LIASLPVNSLKIHQLHAVRGTRLADLYHDGSFI 242


>gi|312137248|ref|YP_004004585.1| radical sam domain protein [Methanothermus fervidus DSM 2088]
 gi|311224967|gb|ADP77823.1| Radical SAM domain protein [Methanothermus fervidus DSM 2088]
          Length = 444

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/119 (18%), Positives = 56/119 (47%), Gaps = 1/119 (0%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           +++ TI +   ++  +  +  +  G+NRI  G +S  ++ L  + +     +   A+ +A
Sbjct: 243 DIDFTISSRVDTINRDTLKNLKTVGLNRIYYGAESGSQRVLNLMKKGITLKQIKDAVKVA 302

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT-LFYKMHKDG 222
           +N+  +     ++  P +T+ +    +  ++    D+     LT   GT ++YK+ + G
Sbjct: 303 KNLNLQTVTSFMFGYPGETLDEMNKTIDFSIKLDPDYCQYSILTPFPGTPIYYKLKRKG 361


>gi|224436404|ref|ZP_03657424.1| hypothetical protein HcinC1_00595 [Helicobacter cinaedi CCUG 18818]
          Length = 320

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 44/90 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+ +++L    R H+ + A       R    ++   LIY LP++T       L 
Sbjct: 165 LEYGIQSVYDKTLELTNRAHSIAGAKEMFEKTRAKGVKVCAHLIYGLPEETPEMMLHSLD 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             L + ++ + ++ L +  GT   K++K+G
Sbjct: 225 CVLEWGINGIKIHPLYVVNGTRLAKLYKEG 254


>gi|297581001|ref|ZP_06942926.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534827|gb|EFH73663.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 316

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSI 248


>gi|290893254|ref|ZP_06556241.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290557236|gb|EFD90763.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 321

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|313142922|ref|ZP_07805115.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313127953|gb|EFR45570.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 317

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 44/90 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+ +++L    R H+ + A       R    ++   LIY LP++T       L 
Sbjct: 162 LEYGIQSVYDKTLELTNRAHSIAGAKEMFEKTRAKGVKVCAHLIYGLPEETPEMMLHSLD 221

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             L + ++ + ++ L +  GT   K++K+G
Sbjct: 222 CVLEWGINGIKIHPLYVVNGTRLAKLYKEG 251


>gi|219116634|ref|XP_002179112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409879|gb|EEC49810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 544

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 9/127 (7%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V+  + ITIE  P      + +     G  RI +GVQS+ E   R   R H  +    + 
Sbjct: 208 VTKCIGITIETRPDYCLKPHLEEMLSYGCTRIEIGVQSIYESVARETNRGHTVAAVSHSF 267

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLF 215
            LA++   ++   ++  LP      +E +L+    Y        D + LY   + +GT  
Sbjct: 268 QLAKDCGFKVVTHMMPDLPNMG---YERDLEGFKEYFENPMFRSDGMKLYPTLVIRGTGL 324

Query: 216 YKMHKDG 222
           Y++ K G
Sbjct: 325 YELWKTG 331


>gi|74311197|ref|YP_309616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           sonnei Ss046]
 gi|82543105|ref|YP_407052.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           boydii Sb227]
 gi|123742024|sp|Q324N4|MIAB_SHIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123746029|sp|Q3Z4D1|MIAB_SHISS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|73854674|gb|AAZ87381.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81244516|gb|ABB65224.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|320174711|gb|EFW49843.1| tRNA-i(6)A37 methylthiotransferase [Shigella dysenteriae CDC
           74-1112]
 gi|323163924|gb|EFZ49733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella sonnei 53G]
 gi|332097757|gb|EGJ02731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 3594-74]
          Length = 474

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|47097506|ref|ZP_00235047.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|254829465|ref|ZP_05234152.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254898172|ref|ZP_05258096.1| hypothetical protein LmonJ_00115 [Listeria monocytogenes J0161]
 gi|254912335|ref|ZP_05262347.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936662|ref|ZP_05268359.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|47014121|gb|EAL05113.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258601880|gb|EEW15205.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609258|gb|EEW21866.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293590316|gb|EFF98650.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 321

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|261198351|ref|XP_002625577.1| histone acetyltransferase [Ajellomyces dermatitidis SLH14081]
 gi|239594729|gb|EEQ77310.1| histone acetyltransferase [Ajellomyces dermatitidis SLH14081]
          Length = 582

 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFRLSK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L +   Y        D L +Y   + +GT  Y++ 
Sbjct: 298 DAGFKVVSHMMPDLPNVGM---ERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELW 354

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 355 RTGRYKNYTPNALIDI 370


>gi|254832064|ref|ZP_05236719.1| radical SAM protein, family [Listeria monocytogenes 10403S]
          Length = 321

 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|115944396|ref|XP_001194728.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 413

 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +     K G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 210 IGITIETRPDYCLKRHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQMSK 269

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 270 DAGFKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 329

Query: 223 DLVLPSENVAVDL 235
                  +  VDL
Sbjct: 330 RYKSYPPSTLVDL 342


>gi|237730130|ref|ZP_04560611.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908736|gb|EEH94654.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 309

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    ++
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQAECLQTME 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG+   K  + G L      + +D Y +T
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSTMAKAWEAGRL----NGIELDDYTVT 244


>gi|294791928|ref|ZP_06757076.1| radical SAM protein family [Veillonella sp. 6_1_27]
 gi|294457158|gb|EFG25520.1| radical SAM protein family [Veillonella sp. 6_1_27]
          Length = 321

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYDTLEKINRGHDLAQFIDAVLRIKRYGFNITTHMIVNLPWDTMKD-TIEGA 207

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R LS   VD + L+ L I K TL  K +++G   L S
Sbjct: 208 RILSALGVDQVKLHALYIVKNTLMAKWYQEGQFTLIS 244


>gi|282850281|ref|ZP_06259660.1| putative radical SAM protein [Veillonella parvula ATCC 17745]
 gi|282579774|gb|EFB85178.1| putative radical SAM protein [Veillonella parvula ATCC 17745]
          Length = 321

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYDTLEKINRGHDLAQFIDAVLRIKRYGFNITTHMIVNLPWDTMKD-TIEGA 207

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R LS   VD + L+ L I K TL  K +++G   L S
Sbjct: 208 RILSALGVDQVKLHALYIVKNTLMAKWYQEGQFTLIS 244


>gi|239610148|gb|EEQ87135.1| histone acetyltransferase [Ajellomyces dermatitidis ER-3]
          Length = 582

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L +   Y        D L +Y   + +GT  Y++ 
Sbjct: 298 DAGFKVVSHMMPDLPNVGM---ERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELW 354

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 355 RTGRYKNYTPNALIDI 370


>gi|157146729|ref|YP_001454048.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Citrobacter
           koseri ATCC BAA-895]
 gi|157083934|gb|ABV13612.1| hypothetical protein CKO_02502 [Citrobacter koseri ATCC BAA-895]
          Length = 488

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 225 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 275

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 276 -LHLPVQSGADRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQ 334

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 335 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 383


>gi|187733108|ref|YP_001879330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           boydii CDC 3083-94]
 gi|229890659|sp|B2TU59|MIAB_SHIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187430100|gb|ACD09374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii CDC
           3083-94]
          Length = 474

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|229524363|ref|ZP_04413768.1| hypothetical protein VCA_001953 [Vibrio cholerae bv. albensis
           VL426]
 gi|229337944|gb|EEO02961.1| hypothetical protein VCA_001953 [Vibrio cholerae bv. albensis
           VL426]
          Length = 316

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLRVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|229890690|sp|A8AJE9|MIAB_CITK8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGADRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQ 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|327356377|gb|EGE85234.1| histone acetyltransferase [Ajellomyces dermatitidis ATCC 18188]
          Length = 582

 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP   M   E +L +   Y        D L +Y   + +GT  Y++ 
Sbjct: 298 DAGFKVVSHMMPDLPNVGM---ERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELW 354

Query: 220 KDGDLVLPSENVAVDL 235
           + G     + N  +D+
Sbjct: 355 RTGRYKNYTPNALIDI 370


>gi|240274071|gb|EER37589.1| histone acetyltransferase [Ajellomyces capsulatus H143]
 gi|325095547|gb|EGC48857.1| histone acetyltransferase [Ajellomyces capsulatus H88]
          Length = 583

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSK 297

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+    +    +  D L +Y   + +GT  Y++ + 
Sbjct: 298 DAGFKVISHMMPDLPNVGMERDLDQFREYFENP-DFRTDGLKIYPTLVIRGTGLYELWRT 356

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +D+
Sbjct: 357 GRYKNYTPNALIDI 370


>gi|326391529|ref|ZP_08213061.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325992410|gb|EGD50870.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 444

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 2/84 (2%)

Query: 102 VSSNVEITI--EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           +S N++IT    A    +E +  +  +KAG+++I LG++S   + LR L RN+   E I 
Sbjct: 266 ISKNLDITFGFSARVEHLEYDLLKTLKKAGLSKIFLGIESGSPRILRLLHRNYTPYEVIE 325

Query: 160 AIHLARNIFPRMSFDLIYALPKQT 183
            +    N+  +++   +  +P +T
Sbjct: 326 KVGYIENLGIKVTASFMVGIPFET 349


>gi|237707370|ref|ZP_04537851.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226898580|gb|EEH84839.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 486

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 223 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 273

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 274 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 332

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 333 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 381


>gi|225557816|gb|EEH06101.1| histone acetyltransferase [Ajellomyces capsulatus G186AR]
          Length = 583

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSK 297

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+    +    +  D L +Y   + +GT  Y++ + 
Sbjct: 298 DAGFKVISHMMPDLPNVGMERDLDQFREYFENP-DFRTDGLKIYPTLVIRGTGLYELWRT 356

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +D+
Sbjct: 357 GRYKNYTPNALIDI 370


>gi|153825912|ref|ZP_01978579.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149740410|gb|EDM54541.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 316

 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ
Sbjct: 146 LELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQ 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 206 QVLRVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSI 248


>gi|238019232|ref|ZP_04599658.1| hypothetical protein VEIDISOL_01096 [Veillonella dispar ATCC 17748]
 gi|237863931|gb|EEP65221.1| hypothetical protein VEIDISOL_01096 [Veillonella dispar ATCC 17748]
          Length = 310

 Score = 40.8 bits (94), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 138 IELGLQTVNYDTLEKINRGHDLAQFIDAVIRIKRYGFNVTTHMIVNLPWDTMKD-TIEGA 196

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R LS   VD + L+ L I K TL  K +++G   L S
Sbjct: 197 RILSALGVDQVKLHALYIVKNTLMAKWYQEGQFTLIS 233


>gi|217964189|ref|YP_002349867.1| radical SAM protein, family [Listeria monocytogenes HCC23]
 gi|217333459|gb|ACK39253.1| radical SAM protein, family [Listeria monocytogenes HCC23]
 gi|307571244|emb|CAR84423.1| radical SAM family protein [Listeria monocytogenes L99]
          Length = 321

 Score = 40.8 bits (94), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 154 LELGLQSAHDETGRLINRAHDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 214 KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|209881518|ref|XP_002142197.1| radical SAM domain-containing protein [Cryptosporidium muris RN66]
 gi|209557803|gb|EEA07848.1| radical SAM domain-containing protein [Cryptosporidium muris RN66]
          Length = 977

 Score = 40.8 bits (94), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 36/75 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  + V+     R+ G  R+ LG+Q  +   L+ + R     + I AI L +
Sbjct: 342 IGLTLETRPDYITVDEISHLRELGCTRVQLGIQHTDNMVLKLINRGCYMKQVIKAIRLLK 401

Query: 166 NIFPRMSFDLIYALP 180
           +   ++   L+  LP
Sbjct: 402 DTAYKVDIHLMPDLP 416


>gi|294793791|ref|ZP_06758928.1| radical SAM protein family [Veillonella sp. 3_1_44]
 gi|294455361|gb|EFG23733.1| radical SAM protein family [Veillonella sp. 3_1_44]
          Length = 321

 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYDTLEKINRGHDLAQFIDAVLRIKRYGFNITTHMIVNLPWDTMKD-TIEGA 207

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R LS   VD + L+ L I K TL  K +++G   L S
Sbjct: 208 RILSALGVDQVKLHALYIVKDTLMAKWYQEGQFTLIS 244


>gi|227484650|ref|ZP_03914966.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227237370|gb|EEI87385.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 356

 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 14/207 (6%)

Query: 23  VHWPF--CVKKCPYCDFNSHVRRYK-VGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +  PF  C   C +C+    +  YK +  EN  I+     + + +     + I+  F+GG
Sbjct: 8   IFIPFLGCPHDCAFCN-QVKITNYKDMADENSIIKQIEDYLTYFKDKKTAKEIA--FYGG 64

Query: 79  GTPSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNF--QGYRKAGVNRISL 135
               L     ++ L + GI K   +   + ++   +     +NNF     +   V+ I L
Sbjct: 65  SFTGLPYETMVSYLKIAGIYKKKGIIDRIRLSTRPD----YINNFILDTLKAYEVDTIEL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS +++ L    R H+A ++  A  L ++   ++   ++  L K  M +       + 
Sbjct: 121 GIQSFDDEVLAANERGHSALDSKRASKLIKDYGFKLGHQIMPGLYKDKMEKIIKTALESA 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               D   +Y   + K T   K +KDG
Sbjct: 181 KIKPDIARIYPTLVIKDTKLEKFYKDG 207


>gi|72392723|ref|XP_847162.1| acetyltransferase [Trypanosoma brucei TREU927]
 gi|62359207|gb|AAX79650.1| acetyltransferase, putative [Trypanosoma brucei]
 gi|70803192|gb|AAZ13096.1| acetyltransferase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 666

 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 32/56 (57%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + +TIE  P  + ++  + +R  GV R+ +G+Q L++  L  + R+   S+ I AI
Sbjct: 296 IGVTIETRPDYINLSELRRFRSLGVTRVQVGIQHLDDDILTIVNRDCPTSKTIVAI 351


>gi|46110316|ref|XP_382216.1| hypothetical protein FG02040.1 [Gibberella zeae PH-1]
          Length = 572

 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA+
Sbjct: 233 VGITIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDSNRGHTVAAVAETFCLAK 292

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 293 DAGYKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 352

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 353 RYQNYTPNGLIDL 365


>gi|332528141|ref|ZP_08404172.1| YhcC [Rubrivivax benzoatilyticus JA2]
 gi|332112712|gb|EGJ12505.1| YhcC [Rubrivivax benzoatilyticus JA2]
          Length = 303

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)

Query: 122 FQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             GYR+ G    + LG+QS  +++L  + R H  +    A+  AR     +   LI  LP
Sbjct: 129 LAGYRERGYEVWLELGLQSAHDETLARVNRGHGWAAYADAVARARAAGVPVCTHLILGLP 188

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            +T       L+R L    + L L+ L I +G+     HK G++  P
Sbjct: 189 GETDAHAFTTLERVLDAGAEGLKLHPLMITRGSRLAVAHKRGEIAPP 235


>gi|269103461|ref|ZP_06156158.1| hypothetical protein VDA_002887 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163359|gb|EEZ41855.1| hypothetical protein VDA_002887 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 309

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 8/136 (5%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V    ++   GYR+ G    + LG+Q+  +++L+ + R H+ +      
Sbjct: 111 VGLCVGTRPDCVPDAVLDLLAGYREQGYEIWLELGLQTANDKTLKRINRGHDFACYAEIT 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR +  ++   LI  LP  T       ++R +   VD + L+ L + +G+   +  K 
Sbjct: 171 RRARALGIKVCTHLIVGLPGDTKQDNLETIKRVVEVGVDGIKLHPLHLVEGSKLGQAWKA 230

Query: 222 GDLVLPSENVAVDLYN 237
           G +    E V++D Y+
Sbjct: 231 GRI----EEVSLDQYS 242


>gi|217077627|ref|YP_002335345.1| oxygen-independent coproporphyrinogen III oxidase [Thermosipho
           africanus TCF52B]
 gi|217037482|gb|ACJ76004.1| oxygen-independent coproporphyrinogen III oxidase [Thermosipho
           africanus TCF52B]
          Length = 296

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 3/154 (1%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +S   I F GGT + I  +    ++  + K +    +  I I   P  ++  N +  ++ 
Sbjct: 22  KSPEEIAFYGGTFTAIPLEKQKELIALVRKFY---PDTPIRISTRPDELDYENLKFLKQN 78

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
            V  + +G+QS+ +  L    R H+  + + A++L +     +S  L+  L    + +  
Sbjct: 79  NVKTVEIGIQSMFDDVLSAANRGHSRKDNLNAVNLLKEFGFEISAHLMIGLLNDNIKKDL 138

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + +Q  L+  V    ++   I K T   K++ +G
Sbjct: 139 LSIQELLNLGVKMFRIHPTIIFKNTELEKLYLEG 172


>gi|307596567|ref|YP_003902884.1| histone acetyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307551768|gb|ADN51833.1| histone acetyltransferase, ELP3 family [Vulcanisaeta distributa DSM
           14429]
          Length = 507

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P      +     + G  R+ +GVQS+ +  LR + R H   E   A    +
Sbjct: 148 VALELETRPDFARPRHIDLMLRLGFTRVEIGVQSIYDDILRRVKRGHGVKEVTEATQYLK 207

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYK 217
           +   ++ + ++  LP  T  + ++E+ + +    S+  D + +Y   + K T  Y+
Sbjct: 208 DAAYKVCYHIMPGLPGSTPDR-DLEMVKTIFDDPSFMPDCVKVYPTFVVKDTELYE 262


>gi|165976746|ref|YP_001652339.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165876847|gb|ABY69895.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 463

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 144 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 197

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 198 FDGGICTFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 248

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 249 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQ 307

Query: 190 ELQ 192
            ++
Sbjct: 308 TMK 310


>gi|220932036|ref|YP_002508944.1| radical SAM protein, TIGR01212 family [Halothermothrix orenii H
           168]
 gi|219993346|gb|ACL69949.1| radical SAM protein, TIGR01212 family [Halothermothrix orenii H
           168]
          Length = 318

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++   +L  + R H   E I AI  A+     +   LI  LP   M       +
Sbjct: 146 LELGLQTVNYHTLTRVNRGHTLGEVIDAILNAQKYNFEIGIHLILNLPGDNMVDVIENAK 205

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSE 229
              +  VD++ L+ L I +GT F + +K G+  ++P E
Sbjct: 206 IISALKVDNVKLHALYIREGTEFAEKYKKGEFDIIPLE 243


>gi|313893266|ref|ZP_07826841.1| radical SAM protein, TIGR01212 family [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442162|gb|EFR60579.1| radical SAM protein, TIGR01212 family [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 321

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYDTLEKINRGHDLAQFIDAVLRIKRYGFNVTTHMIVNLPWDTMKD-TIEGA 207

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           R LS   VD + L+ L I K TL  K +++G   L S
Sbjct: 208 RILSALGVDQVKLHALYIVKNTLMAKWYQEGQFTLIS 244


>gi|91209704|ref|YP_539690.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli UTI89]
 gi|117622870|ref|YP_851783.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           APEC O1]
 gi|218557592|ref|YP_002390505.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli S88]
 gi|122424608|sp|Q1REQ5|MIAB_ECOUT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890519|sp|B7MFS7|MIAB_ECO45 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890527|sp|A1A8S9|MIAB_ECOK1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91071278|gb|ABE06159.1| hypothetical protein UTI89_C0659 [Escherichia coli UTI89]
 gi|115511994|gb|ABJ00069.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           APEC O1]
 gi|218364361|emb|CAR02036.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           S88]
 gi|294489495|gb|ADE88251.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli IHE3034]
 gi|307627908|gb|ADN72212.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli UM146]
 gi|315287089|gb|EFU46503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           110-3]
 gi|323952768|gb|EGB48636.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H252]
 gi|323958414|gb|EGB54120.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H263]
          Length = 474

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|332281803|ref|ZP_08394216.1| MiaB protein [Shigella sp. D9]
 gi|332104155|gb|EGJ07501.1| MiaB protein [Shigella sp. D9]
          Length = 486

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 223 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 273

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 274 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 332

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 333 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 381


>gi|302791431|ref|XP_002977482.1| hypothetical protein SELMODRAFT_268069 [Selaginella moellendorffii]
 gi|302791437|ref|XP_002977485.1| hypothetical protein SELMODRAFT_443492 [Selaginella moellendorffii]
 gi|300154852|gb|EFJ21486.1| hypothetical protein SELMODRAFT_268069 [Selaginella moellendorffii]
 gi|300154855|gb|EFJ21489.1| hypothetical protein SELMODRAFT_443492 [Selaginella moellendorffii]
          Length = 557

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H          LA+
Sbjct: 227 IGLTIETRPDYCLSPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVGAVADCFCLAK 286

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP   M + +ME  R      S+  D L +Y   + +GT  Y++ K 
Sbjct: 287 DAGFKVVAHMMPNLPNVDM-ERDMESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKT 345

Query: 222 G 222
           G
Sbjct: 346 G 346


>gi|294056057|ref|YP_003549715.1| hypothetical protein Caka_2529 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615390|gb|ADE55545.1| conserved hypothetical protein [Coraliomargarita akajimensis DSM
           45221]
          Length = 314

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRNHNASEA 157
            V + V + I   P  ++    + +++        + +G++S  +Q+L+ + R HN  +A
Sbjct: 114 AVPNVVGLVIGTRPDCLDAEKLKYFQELAQQHYVILEIGIESCYDQTLKRINRGHNYQQA 173

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           + AIHL      ++   +I+ LP ++      E        ++ +  +QL + KGT
Sbjct: 174 VDAIHLTAAHDIKVGTHMIFGLPGESEDMLLDEAAMLSQLPLNTIKFHQLQLIKGT 229


>gi|191168679|ref|ZP_03030459.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B7A]
 gi|309795469|ref|ZP_07689886.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           145-7]
 gi|190901271|gb|EDV61040.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B7A]
 gi|308120844|gb|EFO58106.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           145-7]
          Length = 474

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|32034173|ref|ZP_00134395.1| COG0621: 2-methylthioadenine synthetase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208789|ref|YP_001054014.1| hypothetical protein APL_1325 [Actinobacillus pleuropneumoniae L20]
 gi|190150645|ref|YP_001969170.1| hypothetical protein APP7_1376 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263992|ref|ZP_07545593.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|229890417|sp|A3N1X3|MIAB_ACTP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890418|sp|B3GYA4|MIAB_ACTP7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|126097581|gb|ABN74409.1| hypothetical protein APL_1325 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915776|gb|ACE62028.1| hypothetical protein APP7_1376 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306870681|gb|EFN02424.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 475

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 156 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 209

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|302780773|ref|XP_002972161.1| hypothetical protein SELMODRAFT_96899 [Selaginella moellendorffii]
 gi|300160460|gb|EFJ27078.1| hypothetical protein SELMODRAFT_96899 [Selaginella moellendorffii]
          Length = 557

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H          LA+
Sbjct: 227 IGLTIETRPDYCLSPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVGAVADCFCLAK 286

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP   M + +ME  R      S+  D L +Y   + +GT  Y++ K 
Sbjct: 287 DAGFKVVAHMMPNLPNVDM-ERDMESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKT 345

Query: 222 G 222
           G
Sbjct: 346 G 346


>gi|307246244|ref|ZP_07528325.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307255228|ref|ZP_07537043.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307257391|ref|ZP_07539161.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307259662|ref|ZP_07541386.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306852853|gb|EFM85077.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306861777|gb|EFM93756.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306864241|gb|EFM96154.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306866307|gb|EFM98171.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 475

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 156 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 209

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|157372576|ref|YP_001480565.1| putative radical SAM protein [Serratia proteamaculans 568]
 gi|157324340|gb|ABV43437.1| conserved hypothetical radical SAM protein [Serratia proteamaculans
           568]
          Length = 312

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V I +   P  V    ++   GY + G    + LG+Q+  +++L+ + R H+ S      
Sbjct: 111 VGICVGTRPDCVPPAALDLLAGYLEQGYEVWLELGLQTAHDKTLKRINRGHDFSCYQHTA 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            LAR    ++   LI  LP +T       LQ+ +   VD + L+ L I  G+   +  + 
Sbjct: 171 RLARERGLKVCSHLIVGLPGETAADHLSTLQQVVDSGVDGIKLHPLHIVTGSTLARAWQA 230

Query: 222 GDL 224
           G L
Sbjct: 231 GRL 233


>gi|237807391|ref|YP_002891831.1| hypothetical protein Tola_0616 [Tolumonas auensis DSM 9187]
 gi|237499652|gb|ACQ92245.1| conserved hypothetical protein [Tolumonas auensis DSM 9187]
          Length = 308

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 102 VSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEA 157
           V+  V + +   P  V    ++    Y++ G+   + LG+QS    +L+ + R H+ S  
Sbjct: 107 VADMVGLCVGTRPDCVPDAVLDLLSSYQQQGLEIWLELGLQSAHAATLKRINRGHDYSAY 166

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             A+  AR    ++   LI  LP++   +    LQ+ ++   D + L+ L + +G+   K
Sbjct: 167 ADAVERARARNLKICTHLIVGLPEEGNDECLSTLQQVVATGTDGIKLHPLHVVEGSTMAK 226

Query: 218 MHKDGDL 224
             + G L
Sbjct: 227 AWRAGRL 233


>gi|15800374|ref|NP_286386.1| hypothetical protein Z0810 [Escherichia coli O157:H7 EDL933]
 gi|25305438|pir||F85566 hypothetical protein yleA [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|12513570|gb|AAG54994.1|AE005245_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 474

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|320178452|gb|EFW53420.1| tRNA-i(6)A37 methylthiotransferase [Shigella boydii ATCC 9905]
          Length = 474

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|307106895|gb|EFN55139.1| hypothetical protein CHLNCDRAFT_31217 [Chlorella variabilis]
          Length = 548

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      +       G  R+ +G+QS  E   R   R H  +      HLA+
Sbjct: 187 IGMTIETRPDFCLTPHLAQMLSYGCTRLEIGLQSTYEDVARDTNRGHTVAAVGECFHLAK 246

Query: 166 NIFPRMSFDLI-YALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFYKM 218
           +      F +I + +P      WE +++         ++  D L LY   + +GT  Y++
Sbjct: 247 D----AGFKVIAHMMPDLPNVGWERDIESFREFFENPAFRSDGLKLYPTLVIRGTGLYEL 302

Query: 219 HKDG 222
            K G
Sbjct: 303 WKRG 306


>gi|307248353|ref|ZP_07530376.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307250579|ref|ZP_07532521.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307252960|ref|ZP_07534848.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307261809|ref|ZP_07543475.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|229890699|sp|B0BQR0|MIAB_ACTPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|306855091|gb|EFM87271.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306857395|gb|EFM89509.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306859598|gb|EFM91623.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306868627|gb|EFN00438.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
          Length = 475

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 156 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 209

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|194766229|ref|XP_001965227.1| GF21222 [Drosophila ananassae]
 gi|190617837|gb|EDV33361.1| GF21222 [Drosophila ananassae]
          Length = 672

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVAHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|291223266|ref|XP_002731631.1| PREDICTED: elongation protein 3 homolog [Saccoglossus kowalevskii]
          Length = 549

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H+++
Sbjct: 218 IGITIETRPDYCLKKHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHMSK 277

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +    +  +E     ++  D + +Y   + +GT  Y++ K G
Sbjct: 278 DAGFKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGMKIYPTLVIRGTGLYELWKTG 337

Query: 223 DLVLPSENVAVDL 235
                  +  VDL
Sbjct: 338 RYKSYPPSTLVDL 350


>gi|55377799|ref|YP_135649.1| hypothetical protein rrnAC0974 [Haloarcula marismortui ATCC 43049]
 gi|55230524|gb|AAV45943.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 551

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 4/127 (3%)

Query: 94  DGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           D IA+N T    NV  T E  P   +          G  ++ +GVQ+  E+  R + R H
Sbjct: 213 DVIAENETADVRNVATTFETKPDWCDPEQIDRMLDLGATKVEVGVQTTFERINREMHRGH 272

Query: 153 NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTI 209
               +I A    R+   ++ F ++   P  +      + +R      +  D+L +Y   I
Sbjct: 273 GVQASIDANRRLRDSGFKVGFHMMPGQPGMSKEMCLEDFRRIFEQTDWRPDYLKIYPTLI 332

Query: 210 EKGTLFY 216
            +GT+ Y
Sbjct: 333 VEGTVTY 339


>gi|24112041|ref|NP_706551.1| hypothetical protein SF0621 [Shigella flexneri 2a str. 301]
 gi|30062152|ref|NP_836323.1| hypothetical protein S0643 [Shigella flexneri 2a str. 2457T]
 gi|110804691|ref|YP_688211.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           flexneri 5 str. 8401]
 gi|209917923|ref|YP_002292007.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli SE11]
 gi|300920521|ref|ZP_07136947.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           115-1]
 gi|81723658|sp|Q83LY3|MIAB_SHIFL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|122957570|sp|Q0T6S0|MIAB_SHIF8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890530|sp|B6HYN0|MIAB_ECOSE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|24050864|gb|AAN42258.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040397|gb|AAP16129.1| hypothetical protein S0643 [Shigella flexneri 2a str. 2457T]
 gi|110614239|gb|ABF02906.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|209911182|dbj|BAG76256.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|281600005|gb|ADA72989.1| protein yleA [Shigella flexneri 2002017]
 gi|300412460|gb|EFJ95770.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           115-1]
 gi|313649693|gb|EFS14117.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri 2a str.
           2457T]
 gi|320198212|gb|EFW72816.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli EC4100B]
 gi|324016069|gb|EGB85288.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           117-3]
 gi|332760967|gb|EGJ91255.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri
           4343-70]
 gi|332761234|gb|EGJ91520.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri
           2747-71]
 gi|332768235|gb|EGJ98420.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri
           2930-71]
 gi|333007424|gb|EGK26904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri VA-6]
 gi|333007943|gb|EGK27419.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-218]
 gi|333010077|gb|EGK29512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-272]
 gi|333020908|gb|EGK40168.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-227]
 gi|333021472|gb|EGK40722.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-304]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|332752372|gb|EGJ82762.1| radical SAM superfamily protein [Shigella flexneri 4343-70]
 gi|333000388|gb|EGK19971.1| radical SAM superfamily protein [Shigella flexneri K-218]
          Length = 309

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 43/85 (50%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
           R +  +VD + L+ L I KG++  K
Sbjct: 202 RVVETSVDGIKLHPLHIVKGSIMAK 226


>gi|15829953|ref|NP_308726.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. Sakai]
 gi|16128644|ref|NP_415194.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|26246637|ref|NP_752677.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli CFT073]
 gi|82775938|ref|YP_402285.1| hypothetical protein SDY_0597 [Shigella dysenteriae Sd197]
 gi|89107530|ref|AP_001310.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K-12 substr. W3110]
 gi|110640883|ref|YP_668611.1| MiaB protein [Escherichia coli 536]
 gi|157157673|ref|YP_001461833.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E24377A]
 gi|157160149|ref|YP_001457467.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli HS]
 gi|168752231|ref|ZP_02777253.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4113]
 gi|168758304|ref|ZP_02783311.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4401]
 gi|168764662|ref|ZP_02789669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4501]
 gi|168767108|ref|ZP_02792115.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4486]
 gi|168777598|ref|ZP_02802605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4196]
 gi|168779152|ref|ZP_02804159.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4076]
 gi|168786511|ref|ZP_02811518.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC869]
 gi|168802429|ref|ZP_02827436.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC508]
 gi|170020982|ref|YP_001725936.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli ATCC
           8739]
 gi|170080341|ref|YP_001729661.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170679912|ref|YP_001742780.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli SMS-3-5]
 gi|188492519|ref|ZP_02999789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 53638]
 gi|191173977|ref|ZP_03035495.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli F11]
 gi|193063365|ref|ZP_03044455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E22]
 gi|193069098|ref|ZP_03050056.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E110019]
 gi|194429753|ref|ZP_03062269.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B171]
 gi|194434466|ref|ZP_03066727.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1012]
 gi|194439882|ref|ZP_03071945.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 101-1]
 gi|195939398|ref|ZP_03084780.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808891|ref|ZP_03251228.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4206]
 gi|208814878|ref|ZP_03256057.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4045]
 gi|208823289|ref|ZP_03263607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4042]
 gi|209395752|ref|YP_002269297.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4115]
 gi|217324477|ref|ZP_03440561.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. TW14588]
 gi|218549762|ref|YP_002383553.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           fergusonii ATCC 35469]
 gi|218553203|ref|YP_002386116.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli IAI1]
 gi|218694100|ref|YP_002401767.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           55989]
 gi|218699025|ref|YP_002406654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli IAI39]
 gi|218703994|ref|YP_002411513.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli UMN026]
 gi|227884364|ref|ZP_04002169.1| 2-methylthioadenine synthase [Escherichia coli 83972]
 gi|238899938|ref|YP_002925734.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           BW2952]
 gi|253774355|ref|YP_003037186.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160740|ref|YP_003043848.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli B str. REL606]
 gi|254791824|ref|YP_003076661.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. TW14359]
 gi|256020613|ref|ZP_05434478.1| isopentenyl-adenosine A37 tRNA methylthiolase [Shigella sp. D9]
 gi|256023728|ref|ZP_05437593.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia sp.
           4_1_40B]
 gi|260842887|ref|YP_003220665.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O103:H2 str. 12009]
 gi|260853912|ref|YP_003227803.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O26:H11 str. 11368]
 gi|260866809|ref|YP_003233211.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O111:H- str. 11128]
 gi|261224129|ref|ZP_05938410.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257823|ref|ZP_05950356.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281610|ref|YP_003498428.1| hypothetical protein G2583_0824 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403922|ref|ZP_06647916.1| RNA modification enzyme [Escherichia coli FVEC1412]
 gi|293413956|ref|ZP_06656605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B185]
 gi|293418774|ref|ZP_06661209.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B088]
 gi|298379697|ref|ZP_06989302.1| Dimethylallyl adenosine tRNA methylthiotransferase miaB
           [Escherichia coli FVEC1302]
 gi|300817816|ref|ZP_07098030.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           107-1]
 gi|300823020|ref|ZP_07103154.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           119-7]
 gi|300901175|ref|ZP_07119279.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           198-1]
 gi|300907841|ref|ZP_07125457.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 84-1]
 gi|300931599|ref|ZP_07146911.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           187-1]
 gi|300937869|ref|ZP_07152662.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 21-1]
 gi|300951164|ref|ZP_07165027.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           116-1]
 gi|300959238|ref|ZP_07171313.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           175-1]
 gi|300989977|ref|ZP_07179053.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 45-1]
 gi|300996640|ref|ZP_07181498.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           200-1]
 gi|301025204|ref|ZP_07188775.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 69-1]
 gi|301028854|ref|ZP_07192030.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           196-1]
 gi|301049854|ref|ZP_07196792.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           185-1]
 gi|301302146|ref|ZP_07208279.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           124-1]
 gi|301643922|ref|ZP_07243949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           146-1]
 gi|307137277|ref|ZP_07496633.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli H736]
 gi|307312622|ref|ZP_07592254.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli W]
 gi|309786323|ref|ZP_07680949.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1617]
 gi|312970738|ref|ZP_07784919.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1827-70]
 gi|331641164|ref|ZP_08342299.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H736]
 gi|331651675|ref|ZP_08352694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M718]
 gi|331662028|ref|ZP_08362951.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA143]
 gi|331667016|ref|ZP_08367890.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA271]
 gi|331672195|ref|ZP_08372987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA280]
 gi|331676323|ref|ZP_08377035.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H591]
 gi|331682080|ref|ZP_08382704.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H299]
 gi|83288201|sp|P0AEI3|MIAB_ECO57 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83288202|sp|P0AEI2|MIAB_ECOL6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83288203|sp|P0AEI1|MIAB_ECOLI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123049384|sp|Q0TK19|MIAB_ECOL5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123742173|sp|Q32IR1|MIAB_SHIDS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890518|sp|A7ZJ54|MIAB_ECO24 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890520|sp|B7L9K8|MIAB_ECO55 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890521|sp|B5YQL3|MIAB_ECO5E RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890522|sp|B7NM12|MIAB_ECO7I RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890524|sp|B7M5I8|MIAB_ECO8A RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890525|sp|B1X656|MIAB_ECODH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890526|sp|A7ZXT0|MIAB_ECOHS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890528|sp|B1IYE7|MIAB_ECOLC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890529|sp|B7N9R6|MIAB_ECOLU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890531|sp|B1LLB3|MIAB_ECOSM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890532|sp|B7LKU3|MIAB_ESCF3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|26107036|gb|AAN79220.1|AE016757_124 Hypothetical protein yleA [Escherichia coli CFT073]
 gi|1778580|gb|AAB40863.1| HI0019 homolog [Escherichia coli]
 gi|1786882|gb|AAC73762.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|13360157|dbj|BAB34122.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|81240086|gb|ABB60796.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|85674736|dbj|BAE76357.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K12 substr. W3110]
 gi|110342475|gb|ABG68712.1| MiaB protein [Escherichia coli 536]
 gi|157065829|gb|ABV05084.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli HS]
 gi|157079703|gb|ABV19411.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E24377A]
 gi|169755910|gb|ACA78609.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli ATCC
           8739]
 gi|169888176|gb|ACB01883.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170517630|gb|ACB15808.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli SMS-3-5]
 gi|187767200|gb|EDU31044.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4196]
 gi|188013873|gb|EDU51995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4113]
 gi|188487718|gb|EDU62821.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 53638]
 gi|189002755|gb|EDU71741.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4076]
 gi|189354844|gb|EDU73263.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4401]
 gi|189363501|gb|EDU81920.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4486]
 gi|189365364|gb|EDU83780.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4501]
 gi|189373737|gb|EDU92153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC869]
 gi|189375569|gb|EDU93985.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC508]
 gi|190905753|gb|EDV65374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli F11]
 gi|192930949|gb|EDV83553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E22]
 gi|192957642|gb|EDV88087.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E110019]
 gi|194412234|gb|EDX28540.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B171]
 gi|194417317|gb|EDX33425.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1012]
 gi|194421176|gb|EDX37200.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 101-1]
 gi|208728692|gb|EDZ78293.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4206]
 gi|208731526|gb|EDZ80214.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4045]
 gi|208737482|gb|EDZ85166.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4042]
 gi|209157152|gb|ACI34585.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4115]
 gi|209776858|gb|ACI86741.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776860|gb|ACI86742.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776862|gb|ACI86743.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776864|gb|ACI86744.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776866|gb|ACI86745.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|217320698|gb|EEC29122.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. TW14588]
 gi|218350832|emb|CAU96528.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           55989]
 gi|218357303|emb|CAQ89938.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia
           fergusonii ATCC 35469]
 gi|218359971|emb|CAQ97515.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           IAI1]
 gi|218369011|emb|CAR16765.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           IAI39]
 gi|218431091|emb|CAR11967.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           UMN026]
 gi|227838450|gb|EEJ48916.1| 2-methylthioadenine synthase [Escherichia coli 83972]
 gi|238861566|gb|ACR63564.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           BW2952]
 gi|242376435|emb|CAQ31137.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB [Escherichia
           coli BL21(DE3)]
 gi|253325399|gb|ACT30001.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972641|gb|ACT38312.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli B
           str. REL606]
 gi|253976835|gb|ACT42505.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           BL21(DE3)]
 gi|254591224|gb|ACT70585.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. TW14359]
 gi|257752561|dbj|BAI24063.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O26:H11 str. 11368]
 gi|257758034|dbj|BAI29531.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O103:H2 str. 12009]
 gi|257763165|dbj|BAI34660.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O111:H- str. 11128]
 gi|260450172|gb|ACX40594.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli DH1]
 gi|284920461|emb|CBG33522.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           042]
 gi|290761483|gb|ADD55444.1| UPF0004 protein yleA [Escherichia coli O55:H7 str. CB9615]
 gi|291325302|gb|EFE64717.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B088]
 gi|291428508|gb|EFF01533.1| RNA modification enzyme [Escherichia coli FVEC1412]
 gi|291434014|gb|EFF06987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B185]
 gi|298279395|gb|EFI20903.1| Dimethylallyl adenosine tRNA methylthiotransferase miaB
           [Escherichia coli FVEC1302]
 gi|299878159|gb|EFI86370.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           196-1]
 gi|300298388|gb|EFJ54773.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           185-1]
 gi|300304469|gb|EFJ58989.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           200-1]
 gi|300314167|gb|EFJ63951.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           175-1]
 gi|300355389|gb|EFJ71259.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           198-1]
 gi|300396156|gb|EFJ79694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 69-1]
 gi|300400473|gb|EFJ84011.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 84-1]
 gi|300407252|gb|EFJ90790.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 45-1]
 gi|300449567|gb|EFK13187.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           116-1]
 gi|300457112|gb|EFK20605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 21-1]
 gi|300460623|gb|EFK24116.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           187-1]
 gi|300524369|gb|EFK45438.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           119-7]
 gi|300529513|gb|EFK50575.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           107-1]
 gi|300842698|gb|EFK70458.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           124-1]
 gi|301077692|gb|EFK92498.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           146-1]
 gi|306907324|gb|EFN37829.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli W]
 gi|307552525|gb|ADN45300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli ABU
           83972]
 gi|308925717|gb|EFP71198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1617]
 gi|309700899|emb|CBJ00196.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           ETEC H10407]
 gi|310337387|gb|EFQ02525.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1827-70]
 gi|315059915|gb|ADT74242.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli W]
 gi|315135327|dbj|BAJ42486.1| hypothetical protein ECDH1ME8569_0630 [Escherichia coli DH1]
 gi|315255031|gb|EFU34999.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 85-1]
 gi|315292085|gb|EFU51437.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           153-1]
 gi|315616417|gb|EFU97034.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 3431]
 gi|320193067|gb|EFW67707.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320643515|gb|EFX12685.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H- str. 493-89]
 gi|320648850|gb|EFX17477.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H- str. H 2687]
 gi|320660116|gb|EFX27646.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320664914|gb|EFX32049.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323153611|gb|EFZ39859.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli EPECa14]
 gi|323158884|gb|EFZ44895.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E128010]
 gi|323179860|gb|EFZ65417.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1180]
 gi|323184984|gb|EFZ70351.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1357]
 gi|323379521|gb|ADX51789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli KO11]
 gi|323938422|gb|EGB34676.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E1520]
 gi|323943075|gb|EGB39234.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E482]
 gi|323945136|gb|EGB41198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H120]
 gi|323963229|gb|EGB58797.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H489]
 gi|323967607|gb|EGB63023.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M863]
 gi|323972115|gb|EGB67329.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA007]
 gi|324006281|gb|EGB75500.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 57-2]
 gi|324010389|gb|EGB79608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 60-1]
 gi|324114782|gb|EGC08750.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia fergusonii
           B253]
 gi|324116735|gb|EGC10650.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E1167]
 gi|325498160|gb|EGC96019.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           fergusonii ECD227]
 gi|326341412|gb|EGD65204.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli O157:H7 str.
           1044]
 gi|326345808|gb|EGD69547.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli O157:H7 str.
           1125]
 gi|327254346|gb|EGE65968.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli STEC_7v]
 gi|331037962|gb|EGI10182.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H736]
 gi|331049953|gb|EGI22011.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M718]
 gi|331060450|gb|EGI32414.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA143]
 gi|331066240|gb|EGI38124.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA271]
 gi|331070662|gb|EGI42025.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA280]
 gi|331076381|gb|EGI47663.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H591]
 gi|331080759|gb|EGI51933.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H299]
 gi|332094333|gb|EGI99384.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 5216-82]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|332342008|gb|AEE55342.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli UMNK88]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|303250593|ref|ZP_07336790.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303253077|ref|ZP_07339227.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302648062|gb|EFL78268.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650581|gb|EFL80740.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
          Length = 455

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 136 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 189

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 190 FDGGICTFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 240

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 241 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQ 299

Query: 190 ELQ 192
            ++
Sbjct: 300 TMK 302


>gi|323976357|gb|EGB71447.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TW10509]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|320638111|gb|EFX07875.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. G5101]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKALIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|322513853|ref|ZP_08066934.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinobacillus ureae ATCC
           25976]
 gi|322120315|gb|EFX92257.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinobacillus ureae ATCC
           25976]
          Length = 475

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 156 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 209

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|320654434|gb|EFX22481.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|196009157|ref|XP_002114444.1| conserved hypothetical protein [Trichoplax adhaerens]
 gi|190583463|gb|EDV23534.1| conserved hypothetical protein [Trichoplax adhaerens]
          Length = 515

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +   A+
Sbjct: 202 IGITIETRPDYCLKKHLSSMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQQAK 261

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +    Q   E     ++  D L +Y   + +GT  Y++ K G
Sbjct: 262 DAGFKVVAHMMPDLPNVDIERDIQGFTEFFENPAFRADGLKIYPTLVIRGTGLYELWKTG 321

Query: 223 DLVLPSENVAVDL 235
                  +V +DL
Sbjct: 322 RYRSYPPDVLIDL 334


>gi|145222297|ref|YP_001132975.1| molybdenum cofactor biosynthesis protein A [Mycobacterium gilvum
           PYR-GCK]
 gi|315442731|ref|YP_004075610.1| GTP cyclohydrolase subunit MoaA [Mycobacterium sp. Spyr1]
 gi|145214783|gb|ABP44187.1| GTP cyclohydrolase subunit MoaA [Mycobacterium gilvum PYR-GCK]
 gi|315261034|gb|ADT97775.1| GTP cyclohydrolase subunit MoaA [Mycobacterium sp. Spyr1]
          Length = 353

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
            C  +C YC   +    +    +      LT +  +R       I+SI F GG P L+ P
Sbjct: 42  LCNLRCTYC-MPAEGLDWMPRDQKLTPDELTRL--LRIGVTRLGITSIRFTGGEP-LVVP 97

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                + D +A    +    EIT+  N   +      G R+AG+NRI++ + +++     
Sbjct: 98  H----LEDVLAATTALQPRPEITLTTNGIGL-AQRAAGLRRAGLNRINVSLDTVDPARFA 152

Query: 147 FLGRNHNASEAIAAIHLAR 165
            + R     + IA +H A+
Sbjct: 153 AITRRDRFDDVIAGLHAAK 171


>gi|145353824|ref|XP_001421200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581437|gb|ABO99493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 555

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)

Query: 97  AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE 156
           A   + +  V +TIE  P   +  + +     G  R+ +G+QS+ E   R   R H  + 
Sbjct: 210 ASEQSRTKCVGLTIETRPDYCQSPHLRQMLSYGCTRLEIGLQSIYEDVARDTNRGHTVAA 269

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKG 212
                 LA++   ++   ++  LP   M + ++E  R       +  D L LY   + +G
Sbjct: 270 VQKCFELAKDAGFKVIAHMMPDLPNVGM-ERDLESFREFFESPDFRTDGLKLYPTLVIRG 328

Query: 213 TLFYKMHKDG 222
           T  Y++ + G
Sbjct: 329 TGLYELWRTG 338


>gi|255030880|ref|ZP_05302831.1| hypothetical protein LmonL_20371 [Listeria monocytogenes LO28]
          Length = 172

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 5   LELGLQSAHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 64

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 65  KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 107


>gi|15790500|ref|NP_280324.1| hypothetical protein VNG1510C [Halobacterium sp. NRC-1]
 gi|169236236|ref|YP_001689436.1| protein acetyltransferase [Halobacterium salinarum R1]
 gi|10581002|gb|AAG19804.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727302|emb|CAP14088.1| putative protein acetyltransferase [Halobacterium salinarum R1]
          Length = 549

 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 3/134 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    ++ A    
Sbjct: 223 NIGTTFETKPDWCDPEQVDRMLDLGATKVEVGVQTTFERVNREMHRGHGVQASVDANRRL 282

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++   P  +      + +R      +  D+L +Y   + + T+ Y M ++
Sbjct: 283 RDAAFKVGFHMMPGQPGMSKEMVLEDFRRLFDDERWKPDYLKIYPTLVVRDTITYDMWRN 342

Query: 222 GDLVLPSENVAVDL 235
           GD        A DL
Sbjct: 343 GDFEPLHNEEAADL 356


>gi|283784432|ref|YP_003364297.1| isopentenyl-adenosine A37 tRNA methylthiolase [Citrobacter
           rodentium ICC168]
 gi|282947886|emb|CBG87448.1| isopentenyl-adenosine A37 tRNA methylthiolase [Citrobacter
           rodentium ICC168]
          Length = 474

 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQ 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L   I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQDRI 369


>gi|291278929|ref|YP_003495764.1| hypothetical protein DEFDS_0514 [Deferribacter desulfuricans SSM1]
 gi|290753631|dbj|BAI80008.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 301

 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+   +L  + R     E   A+ L ++    +   +I+ LP +        ++
Sbjct: 137 LEYGLQSIHNTTLEIINRGSTFEEFDFALKLTKSYGLPVCAHIIFGLPGENRDMMFETVK 196

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                 +D +  + L + KGT  +K   +GD+ L SEN  +D+  L  SI+
Sbjct: 197 YLADNKIDFIKFHHLHVVKGTKMHKEFLNGDIKLLSENEYIDI--LANSIS 245


>gi|46203010|ref|ZP_00052227.2| COG0621: 2-methylthioadenine synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 410

 Score = 40.4 bits (93), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q+ ++  L+ + R H+ ++AI      R++ P + F  DLI   P +T  Q+   
Sbjct: 243 VHLSLQAGDDLILKRMKRRHSRADAIRICRTLRDLRPGLVFGADLIAGFPTETEAQFARS 302

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHK-DGDLV 225
           L       + HL ++  +   GT   +M    GD+V
Sbjct: 303 LDLVAECGLTHLHVFPYSPRPGTPAARMPAVPGDIV 338


>gi|323170787|gb|EFZ56437.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli LT-68]
 gi|332096864|gb|EGJ01854.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           155-74]
          Length = 453

 Score = 40.4 bits (93), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 190 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 240

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 241 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 299

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 300 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 348


>gi|159041882|ref|YP_001541134.1| ELP3 family histone acetyltransferase [Caldivirga maquilingensis
           IC-167]
 gi|157920717|gb|ABW02144.1| histone acetyltransferase, ELP3 family [Caldivirga maquilingensis
           IC-167]
          Length = 510

 Score = 40.4 bits (93), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQS+ +  L  + R H  +E + +  + +
Sbjct: 153 VALTIETRPDFALEKQVNWMISFGATRVELGVQSIYDDVLSRVKRGHGVAEVVKSTRVLK 212

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  LP     +    +    S   +  D + +Y   +  GT  Y+M + G
Sbjct: 213 DSAYKVCYHVMPGLPGSDPDRDLAMIDELFSNPDFKPDCVKIYPTLVIPGTELYEMWRRG 272

Query: 223 DLVLPSENVAVDL 235
           +    SE+  + L
Sbjct: 273 EYSSYSEDTWLTL 285


>gi|213424401|ref|ZP_03357224.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
          Length = 218

 Score = 40.4 bits (93), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++LR + R H+ +   
Sbjct: 99  ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 158

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K
Sbjct: 159 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAK 217


>gi|332763335|gb|EGJ93575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-671]
          Length = 461

 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 198 YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 248

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 249 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 307

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 308 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 356


>gi|308477571|ref|XP_003100999.1| hypothetical protein CRE_16920 [Caenorhabditis remanei]
 gi|308264343|gb|EFP08296.1| hypothetical protein CRE_16920 [Caenorhabditis remanei]
          Length = 405

 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 6/119 (5%)

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E+  + +L     I  I   GG P++   ++I  I++GIA    +    ++ I  N   V
Sbjct: 126 EVLKLVKLFASHGIDKIRLTGGEPTI--RKDIVQIVEGIASTPGIK---DVGITTN-GLV 179

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                   + AG+ +I++ + SLE Q    + R     +   +I LAR  FP++  +++
Sbjct: 180 LPRFLPDLKNAGLTKINISIDSLERQKFAKMTRRDGFDKVWKSIELARRYFPKVKLNVV 238


>gi|238793686|ref|ZP_04637308.1| hypothetical protein yinte0001_630 [Yersinia intermedia ATCC 29909]
 gi|238726927|gb|EEQ18459.1| hypothetical protein yinte0001_630 [Yersinia intermedia ATCC 29909]
          Length = 307

 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++ +  +A+   V   V    +  P +V ++   GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +  +Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDKSQNMATLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + ++  VD L L+ L I +G+   K  + G L
Sbjct: 202 QVVATGVDGLKLHPLHIVEGSTMGKAWRAGRL 233


>gi|154271828|ref|XP_001536767.1| hypothetical protein HCAG_08549 [Ajellomyces capsulatus NAm1]
 gi|150409437|gb|EDN04887.1| hypothetical protein HCAG_08549 [Ajellomyces capsulatus NAm1]
          Length = 449

 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H          L++
Sbjct: 238 VGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSK 297

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+    +    +  D L +Y   + +GT  Y++ + 
Sbjct: 298 DAGFKVISHMMPDLPNVGMERDLDQFREYFENP-DFRTDGLKIYPTLVIRGTGLYELWRT 356

Query: 222 GDLVLPSENVAVDL 235
           G     + N  +D+
Sbjct: 357 GRYKNYTPNALIDI 370


>gi|167945507|ref|ZP_02532581.1| hypothetical protein Epers_02845 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 280

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 15/222 (6%)

Query: 29  VKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           +  C +C+   F+ + R+ K    +  +      + +R+ TG +   + +F   T +  +
Sbjct: 42  IGGCTFCNNVSFSPNGRQPK----SIAEQIAAGRRVVRKRTGAKKYLA-YFQAYTNTYGD 96

Query: 86  PQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQ 143
            Q +  + D  +A+   +  +V    +  P +V ++   GY+  G    + LG+QS  + 
Sbjct: 97  LQQLKSLYDSALAEPDVIGLSVGTRPDCVPPAV-LDLLAGYQAQGYEIWLELGLQSAFDT 155

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + R H  +E   +   AR    ++   LI  LP +  +     L++ L    D L 
Sbjct: 156 TLQRVNRGHGFAEYQESASAARARGLKLCTHLIAGLPGEQASHCHESLRQVLEVGTDGLK 215

Query: 204 LYQLTIEKGTLFYKMHKDGDLV-LPSEN---VAVDLYNLTQS 241
           L+ L + KGT      + G+   L  EN   +A DL  +  +
Sbjct: 216 LHPLHVVKGTQLANQWRRGEYTPLTLENYIQIAADLVEMAPA 257


>gi|167400644|ref|ZP_02306153.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167050012|gb|EDR61420.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 53/107 (49%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G+   K  + G L   +  +A++ Y LT
Sbjct: 202 KVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALALALEDYVLT 248


>gi|308811753|ref|XP_003083184.1| OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
 gi|116055063|emb|CAL57459.1| OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
          Length = 554

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 5/130 (3%)

Query: 97  AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE 156
           A   + +  V +TIE  P   +  + +     G  R+ +G+QS+ E   R   R H  + 
Sbjct: 213 ASEQSRTKCVGLTIETRPDYCQSPHLRQMLSYGCTRLEIGLQSIYEDVARDTNRGHTVAA 272

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKG 212
                 LA++   ++   ++  LP   M + ++E  R       +  D L LY   + +G
Sbjct: 273 VQKCFELAKDAGFKVIAHMMPDLPNVGM-ERDLESFREFFESPDFRTDGLKLYPTLVIRG 331

Query: 213 TLFYKMHKDG 222
           T  Y++ + G
Sbjct: 332 TGLYELWRTG 341


>gi|167745616|ref|ZP_02417743.1| hypothetical protein ANACAC_00308 [Anaerostipes caccae DSM 14662]
 gi|167654928|gb|EDR99057.1| hypothetical protein ANACAC_00308 [Anaerostipes caccae DSM 14662]
          Length = 313

 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 106 VEITIEANPSSVE------VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           V I+I   P  +       +N  Q  R A V  I  G+Q++   +L+ + R H  +E + 
Sbjct: 109 VGISISTRPDCIRKDYLEFLNEIQQERGAAVT-IEFGLQTVNYHTLKKMNRGHTLAEYLN 167

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKM 218
           A+ L       +   +I  LP  T+    +E  R +S   V  +  + L I K ++ Y+ 
Sbjct: 168 AVLLTAPFGFEICTHVILNLPGDTVED-AVETARVISALPVSVVKAHSLYIPKNSVLYEE 226

Query: 219 HKDGDLVLPSE 229
           ++DG + L ++
Sbjct: 227 YRDGKISLCTK 237


>gi|19920684|ref|NP_608834.1| elongator complex protein 3 [Drosophila melanogaster]
 gi|74870482|sp|Q9VQZ6|ELP3_DROME RecName: Full=Probable elongator complex protein 3
 gi|7295707|gb|AAF51012.1| elongator complex protein 3 [Drosophila melanogaster]
 gi|19528489|gb|AAL90359.1| RE35395p [Drosophila melanogaster]
 gi|220948416|gb|ACL86751.1| Elp3-PA [synthetic construct]
 gi|220957548|gb|ACL91317.1| Elp3-PA [synthetic construct]
          Length = 552

 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|195576529|ref|XP_002078128.1| GD23288 [Drosophila simulans]
 gi|194190137|gb|EDX03713.1| GD23288 [Drosophila simulans]
          Length = 552

 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|237736632|ref|ZP_04567113.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420494|gb|EEO35541.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 556

 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 16/193 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC    +  VR Y + +        T+    R +  P  I  + F   T +L  
Sbjct: 183 CPFNCSYCMSSIDKSVRYYSIER--------TKEDLKRFIDSP--IKLLKFVDRTFNL-S 231

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +   +I   + +N+         I AN    E  +F      G  +  +GVQ+++ Q++
Sbjct: 232 KEKYMVIWKFLLENYREGITFHFEINANIFDEETLDFLETVPKGYFQFEIGVQTIDVQAM 291

Query: 146 RFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + +GR +N       I  ++RNI   +  DLI  LP +T  ++        S   + + L
Sbjct: 292 KSIGRVNNLERLEHNIRRISRNI--HLHLDLIAGLPYETYEKFRYSFDYVHSMKPEMIQL 349

Query: 205 YQLTIEKGTLFYK 217
             L + KGT  Y+
Sbjct: 350 GFLKLLKGTKMYE 362


>gi|195342461|ref|XP_002037819.1| GM18474 [Drosophila sechellia]
 gi|194132669|gb|EDW54237.1| GM18474 [Drosophila sechellia]
          Length = 552

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|332999290|gb|EGK18876.1| radical SAM superfamily protein [Shigella flexneri K-272]
 gi|333014661|gb|EGK34007.1| radical SAM superfamily protein [Shigella flexneri K-227]
          Length = 309

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +        AR    ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQQARQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +  +VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETSVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|332306418|ref|YP_004434269.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173747|gb|AEE23001.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 477

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 36/198 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSIS------SIFFG-- 77
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++      + F G  
Sbjct: 157 CSKYCTFC-----VVPYTRGEEVSRPVDDVLLEVAQLAE-QGVREVNLLGQNVNAFRGPH 210

Query: 78  --GGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
             G   +  E   +   +DGI +  +T S  VE T   IEA  +  E+          V+
Sbjct: 211 HDGAICTFAELLEMVASIDGIDRIRYTTSHPVEFTDDIIEAYATIPEL----------VD 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE- 188
            + L VQS  ++ L  + R H A E  + I   R I P   MS D I   P ++ T +E 
Sbjct: 261 HLHLPVQSGSDRVLNLMKRGHTAIEYKSKIRKLRKIRPNLSMSSDFIIGFPGESDTDFEA 320

Query: 189 -MELQRALSYAVDHLSLY 205
            M+L +A+ + +    +Y
Sbjct: 321 TMDLIQAMDFDLSFSFIY 338


>gi|322492016|emb|CBZ27290.1| acetyltransferase-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 702

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 30/56 (53%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + IT+E  P  +     + +R  GV R+ LG+Q L++  L  + R+   ++ + AI
Sbjct: 324 IGITVETRPDYISARELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAI 379


>gi|195471266|ref|XP_002087926.1| GE18291 [Drosophila yakuba]
 gi|194174027|gb|EDW87638.1| GE18291 [Drosophila yakuba]
          Length = 554

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|56414201|ref|YP_151276.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197363125|ref|YP_002142762.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56128458|gb|AAV77964.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094602|emb|CAR60123.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 488

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 225 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 275

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 276 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 334

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 335 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 383


>gi|223986392|ref|ZP_03636398.1| hypothetical protein HOLDEFILI_03710 [Holdemania filiformis DSM
           12042]
 gi|223961634|gb|EEF66140.1| hypothetical protein HOLDEFILI_03710 [Holdemania filiformis DSM
           12042]
          Length = 484

 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I L VQS   + L+ +GR +   E +   H  ++  P  SF  D+I   P +T  Q+EM 
Sbjct: 298 IHLPVQSGSSEMLKIMGRRYTREEYLTLFHKIKDRIPGCSFTTDIIVGFPNETEEQFEMT 357

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           L        D    +  +  +GT   +M  +    +P+E  +  L  L + I
Sbjct: 358 LSLVDECQYDGAFTFIYSPREGTPAARMQDN----VPAEVKSRRLQQLNEKI 405


>gi|292657001|ref|YP_003536898.1| HAT (histone acetyltransferase) family protein [Haloferax volcanii
           DS2]
 gi|291371267|gb|ADE03494.1| Elp3 of HAT (histone acetyltransferase) family [Haloferax volcanii
           DS2]
          Length = 550

 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)

Query: 85  EPQNIAL--ILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           +P+++    I D IA+N T    N+  T E  P   +          G  ++ +GVQ+  
Sbjct: 202 DPEDVEFEYIEDVIAENETNDIRNIGTTFETKPDWCDPEQIDRMLDLGATKVEVGVQTTY 261

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ--RAL---- 195
           E+  R + R H    +I A    R+   ++ F   + +P Q     EM L+  R L    
Sbjct: 262 ERINREMHRGHGVQASIDANRRLRDSAFKVGF---HMMPGQPGMTKEMCLEDFRQLFENS 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
            +  D+L +Y   I + T+ Y M
Sbjct: 319 DWRPDYLKIYPTLIVRDTVTYDM 341


>gi|213161683|ref|ZP_03347393.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 383

 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|296327964|ref|ZP_06870499.1| radical SAM domain protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154920|gb|EFG95702.1| radical SAM domain protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 297

 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+   +++   R L   R++  IF   G  +LI P +I 
Sbjct: 31  RCSFCSMYKD-KKFIIKP---IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALIVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++ +L+
Sbjct: 86  IQVLDYIKEVFPECKRVSIYGTAIAIHQKSVE--DLKKLYEKGLTLVYLGVESGDDDALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + L++ I      DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---IVELSKKIM-STGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            ++S+  L + +GT  Y + ++G
Sbjct: 200 KYVSILNLRLYEGTELYNLMQEG 222


>gi|322499278|emb|CBZ34351.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 709

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + IT+E  P  +     + +R  GV R+ LG+Q L++  L  + R+   ++ + AI 
Sbjct: 326 IGITVETRPDYISARELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAIQ 382


>gi|310779300|ref|YP_003967633.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748623|gb|ADO83285.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
          Length = 342

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 45/100 (45%)

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           ++ GV  I LGVQSL+ + L   GR ++  +   A  + +     +   L+  LP  T  
Sbjct: 110 KEYGVTTIELGVQSLDPKVLELSGRGYSPEKVYEASLMIKESGINLGIQLMPGLPGSTDE 169

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           +  +  ++ +    D + +Y   +  GT   K++  G  V
Sbjct: 170 KDFISAKKVVGIGPDMVRIYPTLVINGTQMEKLYYKGSFV 209


>gi|16759622|ref|NP_455239.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142605|ref|NP_805947.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62179268|ref|YP_215685.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615109|ref|YP_001589074.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|25305454|pir||AC0584 MiaB protein (probable tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) miaB [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16501914|emb|CAD05141.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138236|gb|AAO69807.1| MiaB protein [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|62126901|gb|AAX64604.1| methylthiolation of isopentenylated A37 derivatives in rRNA
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364473|gb|ABX68241.1| hypothetical protein SPAB_02876 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|320084943|emb|CBY94732.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           tRNA-i(6)A37 methylthiotransferase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322713735|gb|EFZ05306.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 488

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 225 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 275

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 276 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 334

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 335 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 383


>gi|220910133|ref|YP_002485444.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
 gi|219866744|gb|ACL47083.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
          Length = 675

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 14/154 (9%)

Query: 17  NSLGVYVHWPFCVKKCPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             L V V  P   + CP+ C F S  + ++  +    Q F+ E++   +L    ++    
Sbjct: 189 TPLNVRVAVPNYSRGCPFRCRFCSQWKFWRKYRSRSPQHFVDEIE---RLVKDHNVGFFI 245

Query: 76  FGGGTPSLIEPQNIALILDGIAKN----WTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
                P++ +P+ +AL  + I +N    W +++ V   +       +      YRKAG+ 
Sbjct: 246 LADEEPTINKPRFVALCQELIDRNLGVHWGINTRVTDILR------DEKELPLYRKAGLV 299

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            +SLG ++  + +L    +    ++   A+ L R
Sbjct: 300 HVSLGTEAAAQLNLNLFRKETTIADNKRAVQLLR 333


>gi|197284962|ref|YP_002150834.1| hypothetical protein PMI1091 [Proteus mirabilis HI4320]
 gi|227355364|ref|ZP_03839765.1| radical SAM family protein [Proteus mirabilis ATCC 29906]
 gi|194682449|emb|CAR42355.1| conserved hypothetical protein [Proteus mirabilis HI4320]
 gi|227164588|gb|EEI49459.1| radical SAM family protein [Proteus mirabilis ATCC 29906]
          Length = 309

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)

Query: 106 VEITIEANPSSVEV---NNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V V   +  QGY + G    + LG+Q+   ++L+ + R H+     A  
Sbjct: 111 VGLCVGTRPDCVPVSVLDLLQGYCEQGYEVWLELGLQTAHNKTLKHINRGHDFQCYQATT 170

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             AR    ++   LI  LP++        L++ +   VD L L+ L I +G+   K  K 
Sbjct: 171 KEARRRGLKVCTHLIIGLPREDHQLNMQTLEQVVETGVDGLKLHPLHIVEGSTIAKAWKA 230

Query: 222 GDL 224
           G +
Sbjct: 231 GRI 233


>gi|146087474|ref|XP_001465835.1| acetyltransferase-like protein [Leishmania infantum JPCM5]
 gi|134069935|emb|CAM68264.1| acetyltransferase-like protein [Leishmania infantum JPCM5]
          Length = 709

 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + IT+E  P  +     + +R  GV R+ LG+Q L++  L  + R+   ++ + AI 
Sbjct: 326 IGITVETRPDYISARELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAIQ 382


>gi|261492918|ref|ZP_05989464.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261311459|gb|EEY12616.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 475

 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 16/123 (13%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGSDRVLTMMKRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|262274947|ref|ZP_06052758.1| hypothetical protein VHA_001930 [Grimontia hollisae CIP 101886]
 gi|262221510|gb|EEY72824.1| hypothetical protein VHA_001930 [Grimontia hollisae CIP 101886]
          Length = 309

 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 7/164 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVN 131
           +F   T +  E + + ++ +   K+  +   V + +   P  V    +    GY++ G  
Sbjct: 84  YFQAYTSTYAEVEKLRVMYEDALKHADI---VGLCVGTRPDCVPDAVLELLAGYQQQGYE 140

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q+  +++L+ + R H+ +   A    AR +   +   LI  LP  T       
Sbjct: 141 IWLELGLQTANDKTLQRINRGHDFACYDAITRKARALGLNVCTHLIVGLPGDTKADHITT 200

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           ++R +    D + L+ L I +G++  K  + G L   S    VD
Sbjct: 201 IERVIETGTDGIKLHPLHIVEGSVMAKAWRAGRLDAMSLEAYVD 244


>gi|294637486|ref|ZP_06715772.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Edwardsiella tarda ATCC
           23685]
 gi|291089318|gb|EFE21879.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Edwardsiella tarda ATCC
           23685]
          Length = 474

 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 20/174 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E +   I     + E+ +F         
Sbjct: 211 FDGGICTFAELLRLVAAIDGIDRIRFTTSHPIEFSDDIIAVYEDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  + R H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMKRTHTALEYKAIIRKLRKARPDIQISSDFIVGFPGETQQDFEQ 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +Q       D    +  +   GT    M  D    +P E     LY L + I+
Sbjct: 321 TMQLIADVDFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERIS 370


>gi|168238031|ref|ZP_02663089.1| radical SAM protein, TIGR01212 family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734099|ref|YP_002116279.1| radical SAM protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194709601|gb|ACF88822.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197289154|gb|EDY28523.1| radical SAM protein, TIGR01212 family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 309

 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V    V+    Y+  G    + LG+Q+  +++L  + R H+ +   
Sbjct: 108 ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQ 167

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 168 RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 227

Query: 219 HKDGDLVLPSENVAVDLYNLT 239
            + G L      + ++ Y LT
Sbjct: 228 WEAGRL----NGIELEDYTLT 244


>gi|254362260|ref|ZP_04978374.1| 2-methylthioadenine synthase [Mannheimia haemolytica PHL213]
 gi|261496732|ref|ZP_05993107.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153093835|gb|EDN74770.1| 2-methylthioadenine synthase [Mannheimia haemolytica PHL213]
 gi|261307571|gb|EEY08899.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 475

 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 16/123 (13%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGSDRVLTMMKRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|16764047|ref|NP_459662.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167550789|ref|ZP_02344545.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167990681|ref|ZP_02571781.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231688|ref|ZP_02656746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236659|ref|ZP_02661717.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168240521|ref|ZP_02665453.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168264394|ref|ZP_02686367.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465849|ref|ZP_02699731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168820202|ref|ZP_02832202.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194446753|ref|YP_002039914.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450672|ref|YP_002044705.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194471594|ref|ZP_03077578.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194734184|ref|YP_002113781.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197248340|ref|YP_002145647.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263845|ref|ZP_03163919.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|198245491|ref|YP_002214659.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200391054|ref|ZP_03217665.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204930519|ref|ZP_03221449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|213425074|ref|ZP_03357824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213583025|ref|ZP_03364851.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213647865|ref|ZP_03377918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213859100|ref|ZP_03385071.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|238911620|ref|ZP_04655457.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289825599|ref|ZP_06544785.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|81549773|sp|Q9RCI2|MIAB_SALTY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890639|sp|B5EZB2|MIAB_SALA4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890643|sp|B5FNB2|MIAB_SALDC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890646|sp|B4TB74|MIAB_SALHS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890647|sp|B4SYN0|MIAB_SALNS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890660|sp|B4TPZ0|MIAB_SALSV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890665|sp|Q8Z8G5|MIAB_SALTI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890668|sp|A9MUH8|MIAB_SALPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890674|sp|Q57RQ7|MIAB_SALCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|6523483|emb|CAB62263.1| MiaB protein [Salmonella typhimurium]
 gi|16419184|gb|AAL19621.1| methylthiolation of isopentenylated A37 derivatives in rRNA
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|194405416|gb|ACF65638.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194408976|gb|ACF69195.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194457958|gb|EDX46797.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194709686|gb|ACF88907.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195632043|gb|EDX50563.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197212043|gb|ACH49440.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197242100|gb|EDY24720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197290335|gb|EDY29691.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197940007|gb|ACH77340.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199603499|gb|EDZ02045.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204320453|gb|EDZ05656.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205324195|gb|EDZ12034.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205330871|gb|EDZ17635.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334151|gb|EDZ20915.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339926|gb|EDZ26690.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343227|gb|EDZ29991.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347114|gb|EDZ33745.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|261245942|emb|CBG23744.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992407|gb|ACY87292.1| rRNA modification protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157270|emb|CBW16758.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911702|dbj|BAJ35676.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321226251|gb|EFX51302.1| tRNA-i(6)A37 methylthiotransferase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322613204|gb|EFY10147.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621272|gb|EFY18129.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322623692|gb|EFY20530.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322628964|gb|EFY25743.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322631686|gb|EFY28440.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322637578|gb|EFY34280.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641918|gb|EFY38548.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322646762|gb|EFY43268.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651463|gb|EFY47843.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322653086|gb|EFY49420.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658807|gb|EFY55062.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322664924|gb|EFY61117.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322668926|gb|EFY65078.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322670568|gb|EFY66701.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322675309|gb|EFY71385.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682220|gb|EFY78245.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322684951|gb|EFY80948.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323128987|gb|ADX16417.1| rRNA modification protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323193991|gb|EFZ79193.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197917|gb|EFZ83039.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323202036|gb|EFZ87096.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323207169|gb|EFZ92122.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323210924|gb|EFZ95787.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323214304|gb|EFZ99055.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323219291|gb|EGA03782.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225498|gb|EGA09728.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323231057|gb|EGA15173.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234111|gb|EGA18200.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238194|gb|EGA22252.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323242572|gb|EGA26596.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248451|gb|EGA32385.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251334|gb|EGA35206.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259262|gb|EGA42905.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323262137|gb|EGA45699.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264851|gb|EGA48352.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323272312|gb|EGA55719.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326622414|gb|EGE28759.1| rRNA modification protein [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332987614|gb|AEF06597.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 474

 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|195159520|ref|XP_002020626.1| GL15175 [Drosophila persimilis]
 gi|194117576|gb|EDW39619.1| GL15175 [Drosophila persimilis]
          Length = 550

 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVAHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|159905562|ref|YP_001549224.1| radical SAM family protein [Methanococcus maripaludis C6]
 gi|159887055|gb|ABX01992.1| conserved hypothetical radical SAM protein [Methanococcus
           maripaludis C6]
          Length = 332

 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 9/155 (5%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           ++F  GT +   P+ +  + D      +    + I+I   P  +E   ++  + Y K G 
Sbjct: 110 VYFYPGTNTHGTPKRLKELWDFAL---SFEDVIGISIGTRPDCLENEKLDILENYVKQGY 166

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              I LG+Q++ +++L FL R H++++   A+   +     +   +I  LP ++     M
Sbjct: 167 EIWIDLGIQTMHDKTLDFLNRKHSSNDIRRALIECKKRGILVCGHIILGLPDESWNMM-M 225

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           E  + LS   +D L +Y L + + T   K++  G+
Sbjct: 226 ETSKILSDLEIDALKIYPLVVIENTELEKIYWKGE 260


>gi|240102334|ref|YP_002958642.1| Histone acetyltransferase-like protein [Thermococcus gammatolerans
           EJ3]
 gi|239909887|gb|ACS32778.1| Histone acetyltransferase-like protein [Thermococcus gammatolerans
           EJ3]
          Length = 589

 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 14/244 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +     K G  R+ LGVQ++         R H   E + A  L R
Sbjct: 237 VGLTIETRPDWAFERHIDRMLKLGTTRVELGVQTIFNFIHERTKRGHGVEEIVKATQLLR 296

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++++ ++  LP     + ++   R +     +  D L +Y   + K    Y+  K+
Sbjct: 297 DAGLKINYHIMPGLPGSNFER-DLYTFRTIFEDPRFRPDMLKIYPTLVTKDAPLYRWWKE 355

Query: 222 GDLVLPSENVAVDL----YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI- 276
           G         AV+L    Y L         +   +I     +      NL    + + I 
Sbjct: 356 GKYRPYRTEEAVELLVEAYKLFPKWVRVMRIQR-DIPVQLIVDGVKHSNLGQLVFNELIK 414

Query: 277 -GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            GI P      +VG       I+   E  +K++R++  A   +E FLS E   ++ L+  
Sbjct: 415 RGIRPREIRFREVGHMMEKFGIQPEVEH-IKLLREDYDAAGGREIFLSFEDVKNDILIGF 473

Query: 335 LRLR 338
           LRLR
Sbjct: 474 LRLR 477


>gi|229890667|sp|Q5PLT0|MIAB_SALPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890669|sp|B5BCD1|MIAB_SALPK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|194856087|ref|XP_001968673.1| GG25004 [Drosophila erecta]
 gi|190660540|gb|EDV57732.1| GG25004 [Drosophila erecta]
          Length = 552

 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|125986433|ref|XP_001356980.1| GA13723 [Drosophila pseudoobscura pseudoobscura]
 gi|54645306|gb|EAL34046.1| GA13723 [Drosophila pseudoobscura pseudoobscura]
          Length = 550

 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVAHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|33151471|ref|NP_872824.1| hypothetical protein HD0226 [Haemophilus ducreyi 35000HP]
 gi|81423890|sp|Q7VP74|MIAB_HAEDU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33147691|gb|AAP95213.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 475

 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 156 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 209

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  +  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 210 FDGGICTFAELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSF--------- 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R + P  ++S D I   P +T   +E 
Sbjct: 261 -LHLPIQSGADRVLTMMKRNHTALEYKAIIRKLRAVRPNIQISSDFIVGFPGETAEDFEQ 319

Query: 190 ELQ 192
            ++
Sbjct: 320 TMK 322


>gi|294139687|ref|YP_003555665.1| hypothetical protein SVI_0916 [Shewanella violacea DSS12]
 gi|293326156|dbj|BAJ00887.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 316

 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V + +   P  V    ++   GY+  G+   + LG+QS  +++L+ + R H  ++    +
Sbjct: 112 VGLCVGTRPDCVSDEVIDLLLGYQNQGIEVWLELGLQSANDKTLKRINRGHTFNDYRDTV 171

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             AR    ++   LI  LP +    +   L   L+  VD L L+ L I +G+   K
Sbjct: 172 LRARAKGIKVCTHLILGLPGENHQDYLSSLDAILNTGVDGLKLHPLHIVEGSTMAK 227


>gi|254229683|ref|ZP_04923093.1| radical SAM protein, family [Vibrio sp. Ex25]
 gi|262395234|ref|YP_003287088.1| hypothetical protein VEA_004465 [Vibrio sp. Ex25]
 gi|151937804|gb|EDN56652.1| radical SAM protein, family [Vibrio sp. Ex25]
 gi|262338828|gb|ACY52623.1| hypothetical protein VEA_004465 [Vibrio sp. Ex25]
          Length = 319

 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK++       LQ
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITKRARALGIKVCTHLIVGLPKESRDDNIETLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAV 233
           + L+   D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 202 KVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPELEEYVAI 244


>gi|315303475|ref|ZP_07874062.1| radical SAM protein, family [Listeria ivanovii FSL F6-596]
 gi|313628157|gb|EFR96703.1| radical SAM protein, family [Listeria ivanovii FSL F6-596]
          Length = 321

 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           + LG+QS  +++ + + R H+     E +  +  A NI  R+   +I  LPK+T      
Sbjct: 154 LELGLQSAHDETGQLINRAHDYDCYLEGVKKLQ-AHNI--RICTHIINGLPKETPEMMME 210

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             Q+ +   VD + ++ L + KGT   + +K GDL   + +  V+L
Sbjct: 211 TTQKVVDSGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNL 256


>gi|213616133|ref|ZP_03371959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 316

 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 125 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 175

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 176 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 234

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 235 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 283


>gi|327190190|gb|EGE57295.1| putative methylase protein (RNA modification enzyme), MiaB family
           [Rhizobium etli CNPAF512]
          Length = 599

 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q  ++  L+ + R H  ++A+  I  AR++ P MSF  D+I   P +T   ++  
Sbjct: 427 LHLSLQHGDDMILKRMKRRHLRADALRFIEDARSLRPEMSFGADMIAGFPTETEEMFDNA 486

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++ A    + HL ++  +   GT   +M
Sbjct: 487 VRLAEEAGIAHLHVFPYSPRPGTPAARM 514


>gi|297588171|ref|ZP_06946815.1| radical SAM protein [Finegoldia magna ATCC 53516]
 gi|297574860|gb|EFH93580.1| radical SAM protein [Finegoldia magna ATCC 53516]
          Length = 311

 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 45/96 (46%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q+   ++L+ + R H  ++ I A  + +    R+   +I ALP   M       +
Sbjct: 144 IELGLQTSNNKTLKIINRQHTVADFIRACLMIKEYGFRICTHVILALPWDDMDDVRETAK 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
                 +D   ++ L I K T+  K +++G + L S
Sbjct: 204 LLSVLEIDECKIHSLYIPKHTILAKWYEEGKVKLKS 239


>gi|225174473|ref|ZP_03728472.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
 gi|225170258|gb|EEG79053.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
          Length = 291

 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 21/214 (9%)

Query: 32  CPY--CDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CP+  C F S  R  R+++   + I+    ++   R   G  S+ +IF   G   +++  
Sbjct: 25  CPHNRCTFCSMYRQSRFRLRSVDEIKE---DLAMARDYYGD-SVRTIFLADGNTIVMKTD 80

Query: 88  NIALILDGI------AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           ++  IL  I       +  T   +     +  P+     ++   R+AG++RI  G++S +
Sbjct: 81  HLVEILRCIRQLFPAVERITSYGSARFITKKKPA-----DWVALREAGLSRIHSGMESGD 135

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT-QWEMELQRALSYA-V 199
           ++ LR   +  +A   + A  + ++    +S  +I     +T++ Q      R L+    
Sbjct: 136 DEVLRLQNKGVDAQGIVRAGQMIKDAGIELSEYIIVGAGGKTLSEQHAQNSARVLNRINP 195

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D + L  L   +GT  Y M K GD  L S + A+
Sbjct: 196 DFIRLRTLMPAQGTPLYDMFKKGDFKLLSPHEAL 229


>gi|146277061|ref|YP_001167220.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555302|gb|ABP69915.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides ATCC 17025]
          Length = 600

 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 8/186 (4%)

Query: 18  SLGVYVHWPFCVKKCPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            LGV V  P   + CP+ C F S  + ++  +    +  + E++   +L    ++     
Sbjct: 190 PLGVRVAIPNMARGCPFTCSFCSQWKFWRDYRVRDPKKVVDEIE---KLVNEHNVGFFIL 246

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
               P++   + I    + IA+         I         +    + YRKAG+  ISLG
Sbjct: 247 ADEEPTINRKKFIEFCEEMIARGLPDKVKWGINTRVTDIKRDKEQLKFYRKAGLVHISLG 306

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLAR--NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
            ++  +  L    +    +E   AI L R  +IF    F  I  L  +T    E   Q  
Sbjct: 307 TEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQF--IVGLENETKETLEETFQMV 364

Query: 195 LSYAVD 200
             +  D
Sbjct: 365 WDWQPD 370


>gi|310831381|ref|YP_003970024.1| putative ELP3 family histone acetyltransferase [Cafeteria
           roenbergensis virus BV-PW1]
 gi|309386565|gb|ADO67425.1| putative ELP3 family histone acetyltransferase [Cafeteria
           roenbergensis virus BV-PW1]
          Length = 704

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +        R  G  R+ LG+Q + +  L ++ R    S+++ AI L +
Sbjct: 306 IGLTLETRPDFITPKEITILRSYGCTRVQLGIQHINDDILNYINRGCKHSKSVRAIKLLK 365

Query: 166 NIFPRMSFDLIYALPKQTMTQWE 188
           N   ++   L+  LP      WE
Sbjct: 366 NAGFKVDIHLMPDLPSSNF--WE 386


>gi|254302802|ref|ZP_04970160.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322994|gb|EDK88244.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 297

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+   +++   R L   R++  IF   G  +L+ P +I 
Sbjct: 31  RCTFCSMYKD-KKFVIKP---IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALVVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++ +L+
Sbjct: 86  IQVLDYIREVFPECKRVSIYGTAIAIHQKSVE--DLKKLYEKGLTLVYLGVESGDDDALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + LA+ I      DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---VVELAKKIM-STGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            + S+  L + +GT  Y + ++G
Sbjct: 200 KYASILNLRLYEGTELYNLMQEG 222


>gi|13541329|ref|NP_111017.1| RNA polymerase II complex ELP3 subunit [Thermoplasma volcanium
           GSS1]
          Length = 515

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 106 VEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + +T+E  P      E+++   Y   G  ++ LGVQ++ ++ LR   R H   +   +  
Sbjct: 190 IGLTVETKPDWFFEKEIDDALNY---GTTKVELGVQNINDRILRINNRGHTVEDIARSTQ 246

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL------SYAVDHLSLYQLTIEKGTLFY 216
           LAR+   ++ +   + +P    +   ++ +  L       +  D L +Y   + KGT  Y
Sbjct: 247 LARDAGLKIVY---HIMPGMYGSSPSLDRESFLLMVNDERFKPDMLKIYPTLVTKGTALY 303

Query: 217 KMHKDG 222
            + K+G
Sbjct: 304 NLWKNG 309


>gi|90581601|ref|ZP_01237392.1| putative 2-methylthioadenine synthetase [Vibrio angustum S14]
 gi|90437184|gb|EAS62384.1| putative 2-methylthioadenine synthetase [Vibrio angustum S14]
          Length = 475

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 42/246 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C YC     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 157 CSKYCTYC-----VVPYTRGEEVSRPLDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGPM 210

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
             G   S  E   +   +DGI +  +T S  +E T   I+    + E+          VN
Sbjct: 211 HDGEVASFAELLRLVAAIDGIDRIRYTTSHPIEFTDDIIDVYKDTPEL----------VN 260

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWE- 188
            + L VQS  ++ L  + R H A E  + I   R + P   MS D I A P +T   +E 
Sbjct: 261 YLHLPVQSGSDRILTMMKRPHTAIEYKSKIRKLRKVRPDITMSSDFIVAFPGETDQDFED 320

Query: 189 -MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            M+L R + + + +  ++  +   GT       D    L  E     LY L Q + S   
Sbjct: 321 TMKLIREIDFDISYSFIF--SPRPGTPAADYPCD----LSEEVKKERLYALQQQLNSQAM 374

Query: 248 LHAYEI 253
            HA ++
Sbjct: 375 RHARQM 380


>gi|302336845|ref|YP_003802051.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634030|gb|ADK79457.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 533

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 133 ISLGVQSLEEQSLRFLGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           + +G+QS + + LR + R+    +    +  +H A  ++    FDLIY LP  ++  +  
Sbjct: 267 LQIGLQSADPKVLRNINRSIKQDDFRRKVLFLHEAEVVY---GFDLIYGLPGDSLEGFLA 323

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +  A S   +H+ ++ L +  GT+ +       LV  S++  +        + S+ G H
Sbjct: 324 SIDFAFSMVPNHIDIFPLAVLPGTVLFDNADSFGLVRDSDDPYL--------VRSSSGFH 375

Query: 250 AYEISNHS 257
           + +++  S
Sbjct: 376 SEDMAVAS 383


>gi|325290801|ref|YP_004266982.1| Conserved hypothetical protein CHP01212 [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966202|gb|ADY56981.1| Conserved hypothetical protein CHP01212 [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 312

 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%)

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P++    +F   T +  +P ++  + D   +   +   V + +   P  +         K
Sbjct: 85  PKAKYIAYFQSFTGTYADPDDLQKLYD---EALALKDVVGLAVSTRPDCINEEVLHVLEK 141

Query: 128 AGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
             +NR     I LG+QS+ + +L +L R H+ +  + A H  R    R+   +I  LP +
Sbjct: 142 --INRKTYLWIELGLQSIHDSTLAWLNRGHDYACFLEAFHKLRARGIRVCVHVILGLPCE 199

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             +Q     +      +  + L+ L + KGT
Sbjct: 200 DRSQMLATAREMSKLDIQGIKLHSLHVLKGT 230


>gi|332828280|gb|EGK00992.1| TIGR01212 family radical SAM protein [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 307

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEME 190
           I  G++S  + +L F+ R H  +E++ AIH   A+ I+      LI  LP ++  Q    
Sbjct: 144 IEYGLESTLDSTLEFINRGHTHAESVDAIHKTAAKGIY--TGAHLILGLPNESRDQILAH 201

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                   +  L L+QL + KGT+  K +++
Sbjct: 202 ADEVSKLPLTTLKLHQLQLIKGTVMAKQYRE 232


>gi|156973248|ref|YP_001444155.1| Fe-S oxidoreductase [Vibrio harveyi ATCC BAA-1116]
 gi|156524842|gb|ABU69928.1| hypothetical protein VIBHAR_00929 [Vibrio harveyi ATCC BAA-1116]
          Length = 314

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       L+
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITKRARALGIKVCTHLIVGLPKETRDDNVETLR 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAV 233
           + L    D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 202 KVLEVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEYVAI 244


>gi|262277592|ref|ZP_06055385.1| radical SAM domain protein [alpha proteobacterium HIMB114]
 gi|262224695|gb|EEY75154.1| radical SAM domain protein [alpha proteobacterium HIMB114]
          Length = 563

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           A+ +SVE+  F+  +KAG  R+++G++S   + L  + +   A E    + +A+      
Sbjct: 326 ASDASVEM--FEWMKKAGFRRLNIGIESFSTKVLHEMNKKCTAEENHECMKIAKQTGVGP 383

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVD---HLSLYQ-LTIEKGTLFYKMHKD 221
             ++I   P+ T+   E  +  A  Y +D   HL +   +   KGT +Y+   D
Sbjct: 384 YANIIVTTPESTLEDVEKTVNEAYQYTLDPFFHLGVTMGIKPLKGTDYYETFSD 437


>gi|14324713|dbj|BAB59640.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 531

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 106 VEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + +T+E  P      E+++   Y   G  ++ LGVQ++ ++ LR   R H   +   +  
Sbjct: 206 IGLTVETKPDWFFEKEIDDALNY---GTTKVELGVQNINDRILRINNRGHTVEDIARSTQ 262

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL------SYAVDHLSLYQLTIEKGTLFY 216
           LAR+   ++ +   + +P    +   ++ +  L       +  D L +Y   + KGT  Y
Sbjct: 263 LARDAGLKIVY---HIMPGMYGSSPSLDRESFLLMVNDERFKPDMLKIYPTLVTKGTALY 319

Query: 217 KMHKDG 222
            + K+G
Sbjct: 320 NLWKNG 325


>gi|237742337|ref|ZP_04572818.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|229429985|gb|EEO40197.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
          Length = 261

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 18/182 (9%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEI-- 108
           I+   +++   R L   R++  IF   G  +L+ P +I + +LD I + +     V I  
Sbjct: 12  IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALVVPTDILIQVLDYIREVFPECKRVSIYG 70

Query: 109 -TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             I  +  SVE  + +   + G+  + LGV+S ++++L+F+ +   A +    + L++ I
Sbjct: 71  TAIAIHQKSVE--DLKKLYEKGLTLVYLGVESGDDEALKFIKKGIKAEK---IVELSKKI 125

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYA-------VDHLSLYQLTIEKGTLFYKMHK 220
                 DL   L    + +++     A++ A         + S+  L + +GT  Y + +
Sbjct: 126 MS-TGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASILNLRLYEGTELYNLMQ 184

Query: 221 DG 222
           DG
Sbjct: 185 DG 186


>gi|215485694|ref|YP_002328125.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312965102|ref|ZP_07779339.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 2362-75]
 gi|331656683|ref|ZP_08357645.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA206]
 gi|215263766|emb|CAS08102.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|281177809|dbj|BAI54139.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|312290193|gb|EFR18076.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 2362-75]
 gi|315299188|gb|EFU58442.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 16-3]
 gi|331054931|gb|EGI26940.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA206]
          Length = 474

 Score = 39.7 bits (91), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|197117048|ref|YP_002137475.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197086408|gb|ACH37679.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
           TIGR01212 family [Geobacter bemidjiensis Bem]
          Length = 318

 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           V I++   P S++ +      +   +R   + LG+QS+++  L  + R H  +E ++ + 
Sbjct: 120 VGISVGTRPDSIDDDAVALLTELARDRYVCVELGLQSIDDAILTGINRGHTFAEYLSTVD 179

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                   +   LIY  P +  + +    +   S  V  + L+QL   +GT   +M++DG
Sbjct: 180 RLAGRGIDICTHLIYGFPGEKRSGFVKGARLISSLPVTAVKLHQLHAVEGTKLARMYRDG 239


>gi|116254271|ref|YP_770109.1| methylase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258919|emb|CAK10028.1| putative methylase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 424

 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q  ++  L+ + R H  ++A+  I  AR + P MSF  D+I   P +T   +E  
Sbjct: 251 LHLSLQHGDDMILKRMKRRHLRADALRFIEDARRLRPEMSFGADMIAGFPTETEEMFENA 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++ A    + HL ++  +   GT   +M
Sbjct: 311 VRLAEEAGIAHLHVFPYSPRPGTPAARM 338


>gi|311992346|gb|ADQ26746.1| flagellar stator protein [Aeromonas hydrophila]
          Length = 242

 Score = 39.7 bits (91), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECER 360
           ++W    R+ G   +E +   ++Q++DEF   GL +  +G+S+ D  ML   ++DIE ER
Sbjct: 76  QAWAVFARQQGLLALENQ---ADQESDEFTRQGLTMIVDGVSIDDIRMLLEADIDIEQER 132

Query: 361 N 361
           N
Sbjct: 133 N 133


>gi|238785116|ref|ZP_04629111.1| hypothetical protein yberc0001_380 [Yersinia bercovieri ATCC 43970]
 gi|238714008|gb|EEQ06025.1| hypothetical protein yberc0001_380 [Yersinia bercovieri ATCC 43970]
          Length = 300

 Score = 39.7 bits (91), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)

Query: 75  FFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E   +A++ +  +A+   V   V    +  P +V ++   GY + G    
Sbjct: 83  YFQAYTSTYAEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAV-LDLLSGYHQQGYEVW 141

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDQAQGMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++  VD L L+ L I +G+   K  + G L
Sbjct: 202 MVVATGVDGLKLHPLHIVEGSTMAKAWRAGRL 233


>gi|305664219|ref|YP_003860507.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
 gi|304378788|gb|ADM28627.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
          Length = 436

 Score = 39.7 bits (91), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)

Query: 111 EANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           E  P SVE +  +  R+   N RI +G QS   + L+ + R H + + + A+ +      
Sbjct: 266 EVRPDSVEEDFIREIRRFVDNKRIIVGAQSGSNRILKIIHRGHTSEDIVNAVQILTKYGF 325

Query: 170 RMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            +  DLI+  P +T    E  M+L   L        L+      GT F K+
Sbjct: 326 EVDIDLIFGFPFETKDDIEETMKLIEKLKEYRTRFHLHTFIPLPGTPFIKL 376


>gi|260597078|ref|YP_003209649.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cronobacter
           turicensis z3032]
 gi|260216255|emb|CBA29180.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Cronobacter turicensis z3032]
          Length = 474

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNMMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETQQDFEQ 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|229890673|sp|A9MKB7|MIAB_SALAR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETSDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|261330375|emb|CBH13359.1| acetyltransferase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 666

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 32/56 (57%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + +TIE  P  + ++  + +R  GV R+ +G+Q L++  L  + R+   ++ I AI
Sbjct: 296 IGVTIETRPDYINLSELRRFRSLGVTRVQVGIQHLDDDILTIVNRDCPTAKTIVAI 351


>gi|260587655|ref|ZP_05853568.1| radical SAM domain protein [Blautia hansenii DSM 20583]
 gi|331084055|ref|ZP_08333162.1| hypothetical protein HMPREF0992_02086 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541920|gb|EEX22489.1| radical SAM domain protein [Blautia hansenii DSM 20583]
 gi|330402417|gb|EGG81987.1| hypothetical protein HMPREF0992_02086 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 299

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/142 (19%), Positives = 65/142 (45%), Gaps = 8/142 (5%)

Query: 31  KCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           KC +C     +  ++K+     I++ L E++   +L     ++  F  G  P +++   +
Sbjct: 29  KCKFCTLYDDIPFQFKMSPMEDIEADLQEVKGQFRLWNDNKVTRTFLVGANPFVLKATRL 88

Query: 90  ALILDGIAKNWTVSSNV----EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             I   I K +  + N+     IT  A  +  E+       KAG + +++G+++ ++ +L
Sbjct: 89  LQIASLIQKYFPTNKNIGCFSRITDIALKTDEELLKLS---KAGYDGLTIGIETGDDDAL 145

Query: 146 RFLGRNHNASEAIAAIHLARNI 167
           +F+ + + A + I       N+
Sbjct: 146 KFMNKGYEAKDIITQCKRLDNV 167


>gi|167856488|ref|ZP_02479203.1| hypothetical protein HPS_09340 [Haemophilus parasuis 29755]
 gi|167852383|gb|EDS23682.1| hypothetical protein HPS_09340 [Haemophilus parasuis 29755]
          Length = 463

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 144 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 197

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  S  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 198 FDGGICSFAELLRLVASIDGIDRVRYTTSHPIEFTDDIIEVYKDTPELVSF--------- 248

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 249 -LHLPIQSGSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAQDFEQ 307

Query: 190 ELQ 192
            ++
Sbjct: 308 TMK 310


>gi|123492789|ref|XP_001326144.1| elongation protein 3 homolog [Trichomonas vaginalis G3]
 gi|121909054|gb|EAY13921.1| elongation protein 3 homolog, putative [Trichomonas vaginalis G3]
          Length = 537

 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 9/117 (7%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  R+ +G+Q++ E  L ++GR H   +   +    R
Sbjct: 208 VALTIETRPDYCFAEHIDDMLTYGTTRVEIGLQTVWEDVLWYVGRGHGGDDVARSFRDCR 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWE------MELQRALSYAVDHLSLYQLTIEKGTLFY 216
               +++  ++  LP    T +E      +EL     +  D L LY   + +GT+ Y
Sbjct: 268 RSGLKVTAHMMPNLPH---TDFERDIDGFVELFENPYWRPDGLKLYPTLVMRGTMLY 321


>gi|320170857|gb|EFW47756.1| elongator complex protein 3 [Capsaspora owczarzaki ATCC 30864]
          Length = 557

 Score = 39.7 bits (91), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H          L +
Sbjct: 226 IGITIETRPDYCLKPHISSMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCECFQLGK 285

Query: 166 NIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   +    +  +E     ++  D L LY   + +GT  Y++ K G
Sbjct: 286 DSGYKVVTHMMPDLPNVGLERDLEGFVEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 345

Query: 223 DLVLPSENVAVDL 235
                  +V VDL
Sbjct: 346 RYRSYPPSVLVDL 358


>gi|161504166|ref|YP_001571278.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160865513|gb|ABX22136.1| hypothetical protein SARI_02272 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 488

 Score = 39.7 bits (91), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 225 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 275

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 276 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETSDDFEK 334

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 335 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 383


>gi|257388239|ref|YP_003178012.1| histone acetyltransferase, ELP3 family [Halomicrobium mukohataei
           DSM 12286]
 gi|257170546|gb|ACV48305.1| histone acetyltransferase, ELP3 family [Halomicrobium mukohataei
           DSM 12286]
          Length = 576

 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/199 (19%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNV 106
           QE F++  L  M        P+    + F        +  +   + D I +N T    NV
Sbjct: 196 QEWFVKRALEAMNDFDAGAQPQPAEDVSFAEDP----DEYDFRYLEDVITENETADVRNV 251

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
             T E  P   +        + G  ++ +GVQ+  E+  R + R H    ++ A    R+
Sbjct: 252 ATTFETKPDWCDPEQIDRMLRLGGTKVEVGVQTTYERINREMHRGHGVQASVDANRRLRD 311

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              ++ F ++   P  +      + +R      +  D+L +Y   + +GT+ Y  ++  +
Sbjct: 312 SAFKVGFHMMPGQPGMSKEMCLEDFRRIFEDSKWRPDYLKIYPTLVVEGTVTYDWYRKDE 371

Query: 224 LVLPSENVAVDLYNLTQSI 242
                 + A +L    +S+
Sbjct: 372 FEPLDNDEAAELVAEIKSM 390


>gi|313228040|emb|CBY23190.1| unnamed protein product [Oikopleura dioica]
          Length = 552

 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  V ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H
Sbjct: 217 SKCVGITIETRPDYCLKKHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFH 276

Query: 163 LARN----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++++    I   M  DL     ++ + Q+ +E     ++  D L +Y   + +GT  Y++
Sbjct: 277 MSKDAGFKIVAHMMPDLPNVDLERDLEQF-VEFFENPAFRPDGLKIYPTLVIRGTGLYEL 335


>gi|297519636|ref|ZP_06938022.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli OP50]
          Length = 271

 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 8   YDGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 58

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 59  -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 117

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 118 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 166


>gi|288930449|ref|YP_003434509.1| radical SAM protein [Ferroglobus placidus DSM 10642]
 gi|288892697|gb|ADC64234.1| Radical SAM domain protein [Ferroglobus placidus DSM 10642]
          Length = 465

 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 21/205 (10%)

Query: 28  CVKKCPYCDFNSHV-RRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C   C YC  +    RRY+    EN ++    EM+W+      + I+   F   T +L  
Sbjct: 199 CPFSCLYCVSSKFFGRRYRSRSAENVVE----EMKWLEDEFNAKHIA---FSDDTFTLSK 251

Query: 84  --IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
             +E     +  +G+   W+ +S  +        +++    +  ++AG  R+  GV+S  
Sbjct: 252 KRVESICEKIKEEGVDLTWSCASRAD--------TIDRELVRIMKRAGCTRMYFGVESAS 303

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           E+ L F  +  +      AI + +          I   P ++  + +  L+ A+    D+
Sbjct: 304 ERILNFYRKKLDIKAVERAIRICKEEGIETVCSFIIGAPDESEEEMKRTLKLAMKLDPDY 363

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVL 226
                LT   GT  Y++ +  +L++
Sbjct: 364 AQFSILTPYPGTELYEIAEKENLLI 388


>gi|74055056|gb|AAZ95861.1| PomA [Aeromonas hydrophila]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECER 360
           ++W    R+ G   +E +   ++Q++DEF   GL +  +G+S+ D  ML   ++DIE ER
Sbjct: 79  QAWAVFARQQGLLALENQ---ADQESDEFTRQGLTMIVDGVSIDDIRMLLEADIDIEQER 135

Query: 361 N 361
           N
Sbjct: 136 N 136


>gi|13474043|ref|NP_105611.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Mesorhizobium loti MAFF303099]
 gi|14024795|dbj|BAB51397.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Mesorhizobium loti MAFF303099]
          Length = 511

 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 8/198 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++       + F  E+ W+ +  G   +  I      P++ +  
Sbjct: 203 CPHLCNYCGQRGFWTRWR---HRDPKKFAQEIAWLHREHG---VELINLADENPTVSKKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A +   IA+N  V   +  +  A+    + +    YRKAGV R  LG+++ +EQ+L+ 
Sbjct: 257 WRAFLDALIAEN--VPVLIVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQTLQL 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  + S    AI L R          +     +         ++ ++Y  D +    +
Sbjct: 315 IRKGGSTSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQLIAYDPDQIQALYV 374

Query: 208 TIEKGTLFYKMHKDGDLV 225
           T  + T F+++ +D  ++
Sbjct: 375 TPHRWTPFFRIARDRKVI 392


>gi|117619934|ref|YP_855926.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117561341|gb|ABK38289.1| chemotaxis protein MotA [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 243

 Score = 39.7 bits (91), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECER 360
           ++W    R+ G   +E +   ++Q++DEF   GL +  +G+S+ D  ML   ++DIE ER
Sbjct: 77  QAWAVFARQQGLLALENQ---ADQESDEFTRQGLTMIVDGVSIDDIRMLLEADIDIEQER 133

Query: 361 N 361
           N
Sbjct: 134 N 134


>gi|301059948|ref|ZP_07200831.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
 gi|300445957|gb|EFK09839.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
          Length = 309

 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           V ++I   P  V+   +     YRK  +  +  G+QS  +Q+L+ + R H+A+    A+H
Sbjct: 113 VGLSIGTRPDCVDREILEMISAYRKDYLVWMEYGLQSAHDQTLQTINRGHSAACFERAVH 172

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           ++ ++   +   +I  LP +  +      +   +  V  + ++ L + + T   + +K+G
Sbjct: 173 MSHDLGLNVCAHVILGLPGENRSMMLDTARFIAALPVQGVKIHSLYVIRKTPLAERYKNG 232

Query: 223 DLVLPSENVAVDL 235
           +    + +  VDL
Sbjct: 233 EFRCLTRDEYVDL 245


>gi|218688478|ref|YP_002396690.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli ED1a]
 gi|293408786|ref|ZP_06652625.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B354]
 gi|306812915|ref|ZP_07447108.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli NC101]
 gi|331645818|ref|ZP_08346921.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M605]
 gi|229890523|sp|B7MPH7|MIAB_ECO81 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|218426042|emb|CAR06859.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           ED1a]
 gi|222032414|emb|CAP75153.1| UPF0004 protein yleA [Escherichia coli LF82]
 gi|291471964|gb|EFF14447.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B354]
 gi|305853678|gb|EFM54117.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli NC101]
 gi|312945201|gb|ADR26028.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|320194162|gb|EFW68794.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli WV_060327]
 gi|323191295|gb|EFZ76559.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli RN587/1]
 gi|330910419|gb|EGH38929.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli AA86]
 gi|331044570|gb|EGI16697.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M605]
          Length = 474

 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|261211477|ref|ZP_05925765.1| hypothetical protein VCJ_001738 [Vibrio sp. RC341]
 gi|260839432|gb|EEX66058.1| hypothetical protein VCJ_001738 [Vibrio sp. RC341]
          Length = 312

 Score = 39.7 bits (91), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +Q+L+ + R H+ +        AR++  ++   LI  LP +  +     LQ
Sbjct: 142 LELGLQTAHDQTLKRINRGHDFACYAEITAKARSLGIKVCTHLIVGLPGEGRSDNLATLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 202 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLEQDEYVSI 244


>gi|297569110|ref|YP_003690454.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925025|gb|ADH85835.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 475

 Score = 39.7 bits (91), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R +K    +++      MQ +RQ  G R ++   F     +    +
Sbjct: 210 CPYSCSYCDRSVFRRSFKYNSADYVYR---HMQHLRQRWGVRHLN---FYDDQFTFHRGR 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + L    I +   ++ N  +  E     V+       +KAG   ISLG+++ +   L  
Sbjct: 264 VVELCRRLIEEPLNMTFNCAVRAE----HVDPELLALMKKAGCWMISLGIETGDPDLLAQ 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +N + +     IH       R+   L+  LP +T       ++   S  +D  +L + 
Sbjct: 320 HRQNADLNLLAKVIHDIHRAGIRVKGLLMLGLPGETEESVRRSMRYVFSLPIDDFNLAKF 379

Query: 208 TIEKGTLFY-KMHKDGDL 224
           T   G+  Y K+H+ G+ 
Sbjct: 380 TPFPGSPIYEKIHELGEF 397


>gi|219871156|ref|YP_002475531.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           parasuis SH0165]
 gi|219691360|gb|ACL32583.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Haemophilus parasuis SH0165]
          Length = 463

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 34/183 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI----------F 75
           C K C +C     V  Y  G+E    +   L E+  + +  G R ++ +           
Sbjct: 144 CNKYCSFC-----VVPYTRGEEVSRPVDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGET 197

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           F GG  S  E   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 198 FDGGICSFAELLRLVASIDGIDRVRYTTSHPIEFTDDIIEVYKDTPELVSF--------- 248

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L +QS  ++ L  + RNH A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 249 -LHLPIQSGSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAQDFEQ 307

Query: 190 ELQ 192
            ++
Sbjct: 308 TMK 310


>gi|300927231|ref|ZP_07142963.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           182-1]
 gi|301329194|ref|ZP_07222185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 78-1]
 gi|300416797|gb|EFK00108.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           182-1]
 gi|300844482|gb|EFK72242.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 78-1]
          Length = 474

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S      +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFANLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|156934828|ref|YP_001438744.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cronobacter
           sakazakii ATCC BAA-894]
 gi|229890546|sp|A7MQS5|MIAB_ENTS8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|156533082|gb|ABU77908.1| hypothetical protein ESA_02675 [Cronobacter sakazakii ATCC BAA-894]
          Length = 474

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNMMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETQQDFEQ 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIAEVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|229581815|ref|YP_002840214.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.N.15.51]
 gi|228012531|gb|ACP48292.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.N.15.51]
          Length = 473

 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 8/140 (5%)

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           PS  +P  + L  D   KN       V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 116 PSYDKPSFVYL-EDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---- 195
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK  + + ++E  + +    
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPKSDLDK-DLEAFKTIFSDP 233

Query: 196 SYAVDHLSLY-QLTIEKGTL 214
           ++  D L +Y  L +E   L
Sbjct: 234 NFRPDMLKIYPTLVVETAPL 253


>gi|78221328|ref|YP_383075.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78192583|gb|ABB30350.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 624

 Score = 39.7 bits (91), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 128 AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           AG+   + +G+QS +   L+ + R+ +  +    + L         FDLIY LP  ++  
Sbjct: 279 AGITCSLQIGLQSADPAILKGIRRHFDPDDFRKRVALLNESGAVFGFDLIYGLPGDSLAG 338

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGT 213
           +   L  AL+   +HL ++ L +  GT
Sbjct: 339 FRQSLDFALALYPNHLDIFPLAVLPGT 365


>gi|212224884|ref|YP_002308120.1| Hypothetical histone acetyltransferase Elp3 [Thermococcus
           onnurineus NA1]
 gi|212009841|gb|ACJ17223.1| Hypothetical histone acetyltransferase Elp3 [Thermococcus
           onnurineus NA1]
          Length = 592

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 14/244 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P            K G  R+ LGVQ++         R H   E + A  L R
Sbjct: 240 VGLTIETRPDWAFERQIDRMLKLGTTRVELGVQTIFNFIHERTKRGHGVEEIVKATQLLR 299

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++++ ++  LP     + ++   RA+     +  D L +Y   I      Y+  K+
Sbjct: 300 DAGLKINYHIMPGLPGSNFER-DLYTFRAIFEDARFRPDMLKVYPTLITADAPLYRWWKE 358

Query: 222 GDLVLPSENVAVDL----YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI- 276
           G         AV+L    Y L         +   +I     +      NL    + + I 
Sbjct: 359 GKYRPYRTEEAVELLVEAYKLFPKWVRVMRIQR-DIPAKLIVDGVKHSNLGQLVFNELIK 417

Query: 277 -GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            GI P      +VG       +E   E  ++++R++  A   KE FLS E   ++ L+  
Sbjct: 418 RGIRPREIRFREVGHMMQKFGVEPEMEH-IELLREDYDAAGGKEIFLSFEDTKNDILIGF 476

Query: 335 LRLR 338
           LRLR
Sbjct: 477 LRLR 480


>gi|145298368|ref|YP_001141209.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851140|gb|ABO89461.1| MotA/TolQ/ExbB proton channel [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECER 360
           + W    R+ G   +E +   ++Q++DEF   GL +  +G+S++D  ML   ++DIE ER
Sbjct: 79  QGWAVFARQQGLLALENQ---ADQESDEFTRQGLTMIVDGVSIEDIRMLLEADIDIEQER 135

Query: 361 N 361
           N
Sbjct: 136 N 136


>gi|77920081|ref|YP_357896.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77546164|gb|ABA89726.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 609

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           + +G+QS +   L  + R  +A   +E I  +H A  I+    FDLIY LP  T+  +  
Sbjct: 291 LQIGLQSADPAVLARVHRQFDAEDFTERILLLHEAGVIY---GFDLIYGLPGDTLQGFID 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGT 213
            L  AL    +HL ++ L +  GT
Sbjct: 348 SLDFALGLRPNHLDIFPLAVLPGT 371


>gi|15896051|ref|NP_349400.1| MoaA/NirJ family Fe-S oxidoreductase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025836|gb|AAK80740.1|AE007777_4 MoaA/NirJ family Fe-S oxidoreductase [Clostridium acetobutylicum
           ATCC 824]
 gi|325510205|gb|ADZ21841.1| MoaA/NirJ family Fe-S oxidoreductase [Clostridium acetobutylicum EA
           2018]
          Length = 394

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 23/212 (10%)

Query: 1   MKYLSAYENNMTGQGSNSLG---VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT 57
           ++Y+   +N   G  SN LG   V+     C  +C +C   S  + YK           T
Sbjct: 18  LRYVKEAKNQKNGATSN-LGPVVVFNCTKTCNLRCKHCYAGSDGKTYK-------DELST 69

Query: 58  EMQW--MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           E  +  +  L+  + +  I F GG P LI      LI       +   +N+  T+  N +
Sbjct: 70  EEAYSLIADLSDFK-VPVIIFSGGEP-LIRKDIFELI------EFAKKNNIRSTLSTNGT 121

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
            ++    +  +KAGV+ + + +  + E++  F G+     +AI  I   + +  ++   L
Sbjct: 122 LIDKETAKKIKKAGVSYVGISIDGIGEKNDDFRGKKGAYDKAIEGIRNCKEVGQKVG--L 179

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            + + +    + E   +      +D +  Y L
Sbjct: 180 RFTINQYNYGEIESIFKLIKKEEIDRVCFYHL 211


>gi|295097705|emb|CBK86795.1| radical SAM protein, TIGR01212 family [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 327

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +        L+
Sbjct: 156 LELGLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQQHGLETLE 215

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + +   VD + L+ L I KG++  K  + G L      + +D Y +T
Sbjct: 216 KVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----SGIELDDYTVT 258


>gi|164688567|ref|ZP_02212595.1| hypothetical protein CLOBAR_02212 [Clostridium bartlettii DSM
           16795]
 gi|164602980|gb|EDQ96445.1| hypothetical protein CLOBAR_02212 [Clostridium bartlettii DSM
           16795]
          Length = 355

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 3/184 (1%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F +  +   V  E   Q     ++   +     +   I F GG+ + IE +   
Sbjct: 15  CPHDCIFCNQKKITGVSTEVTAQDARNIIEECLETIDKDTNVEIAFFGGSFTAIEEECQN 74

Query: 91  LILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +L  +AK +     V EI +   P  +  +  +  +K   + I LGVQS++ + L    
Sbjct: 75  ELL-AVAKEYVDKGLVHEIRMSTRPDCISDSILERLKKYDASIIELGVQSMDAKVLIDSV 133

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    I +  L +    ++   ++  LP  T  +     ++ +S   D + +Y   +
Sbjct: 134 RGHDIESVIKSAKLIKEHDIKLGLQMMVGLPSDTEEKCIETARKFISLNPDCVRIYPTLV 193

Query: 210 EKGT 213
            K T
Sbjct: 194 VKDT 197


>gi|118579048|ref|YP_900298.1| putative radical SAM protein [Pelobacter propionicus DSM 2379]
 gi|118501758|gb|ABK98240.1| conserved hypothetical radical SAM protein [Pelobacter propionicus
           DSM 2379]
          Length = 331

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT---MTQWEM 189
           + LG+QS+ + SL ++ R H+ +  + A+   R+   R+   +I  LP ++   M     
Sbjct: 170 LELGLQSIHDTSLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAG 229

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           EL R     +  + L+ L + KGT   +MH  G++ L   +  V L
Sbjct: 230 ELNR---LGLAGVKLHLLHVMKGTRLAEMHARGEVPLMDRDEYVGL 272


>gi|255089789|ref|XP_002506816.1| histone acetyltransferase [Micromonas sp. RCC299]
 gi|226522089|gb|ACO68074.1| histone acetyltransferase [Micromonas sp. RCC299]
          Length = 541

 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 11/124 (8%)

Query: 106 VEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           V +TIE  P    S  +    GY   G  R+ +G+QS+ E   R   R H  +       
Sbjct: 208 VGLTIETRPDYCLSPHLRQMLGY---GCTRLEIGLQSVYEDVARDTNRGHTVAAVQKCFE 264

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP   M + ++E  R       +  D L LY   + +GT  Y++
Sbjct: 265 LAKDAGFKVVVHMMPDLPNVGM-ERDLESFREFFESPDFRTDGLKLYPTLVIRGTGLYEL 323

Query: 219 HKDG 222
            + G
Sbjct: 324 WRTG 327


>gi|229816649|ref|ZP_04446938.1| hypothetical protein COLINT_03698 [Collinsella intestinalis DSM
           13280]
 gi|229807777|gb|EEP43590.1| hypothetical protein COLINT_03698 [Collinsella intestinalis DSM
           13280]
          Length = 642

 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P ++  ++    R  G  ++ +G+QSL++  L    R    S+   A  L R
Sbjct: 295 VGLVVETRPDAITPDSLTIIRHLGCTKVQMGIQSLDQAVLDANDRGIEISQIERAFELLR 354

Query: 166 ----NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                I      +L+ + P++    + + L R L +  D + LY   + +G    +  + 
Sbjct: 355 VFGFKIHAHAMVNLLGSTPERDKDDY-LRLVRGLPFQPDEIKLYPCALIEGARLQERFEA 413

Query: 222 GDLVLPSENVAVDL 235
           G+    SE   +D+
Sbjct: 414 GEWAPYSEAELLDI 427


>gi|212696247|ref|ZP_03304375.1| hypothetical protein ANHYDRO_00783 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676876|gb|EEB36483.1| hypothetical protein ANHYDRO_00783 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 318

 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q+   ++L+ L R  + ++ I A ++  +   R+   +I +LP     Q  +E  
Sbjct: 146 IELGLQTANYKTLKILNRCEDLADFIKACNMINDYGFRICTHVILSLPWDD-NQDIVETA 204

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           R ++   V  + ++ L I K T   KM+K+ + V+PS+
Sbjct: 205 RIINVLKVREVKIHSLFIIKNTQLEKMYKNNEFVMPSK 242


>gi|325846595|ref|ZP_08169510.1| radical SAM protein, TIGR01212 family [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481353|gb|EGC84394.1| radical SAM protein, TIGR01212 family [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 318

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q+   ++L+ L R  + ++ I A ++      R+   +I +LP     Q  +E  
Sbjct: 146 IELGLQTANYKTLKILNRCEDLADFIRACNMINEYGFRICTHVILSLPWDD-DQDIVETA 204

Query: 193 RAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           R + +  V  + ++ L I K T   KM+K+ ++V+PS+
Sbjct: 205 RIINTLKVKEVKIHSLYIIKNTKLEKMYKNNEIVMPSK 242


>gi|149190329|ref|ZP_01868602.1| hypothetical protein VSAK1_13987 [Vibrio shilonii AK1]
 gi|148835818|gb|EDL52782.1| hypothetical protein VSAK1_13987 [Vibrio shilonii AK1]
          Length = 312

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV +    GY + G    + LG+Q+  + +L+ + R H+ +        AR +  ++ 
Sbjct: 123 PESV-LELLAGYVEQGYEIWLELGLQTAHDHTLKRINRGHDFAVYDEITRRARALGIKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI  LP ++     + L + L+   D + L+ L I +G+   K  + G L  P+    
Sbjct: 182 THLIVGLPNESKQDNLVTLDKVLATGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPTLEFY 241

Query: 233 VDL 235
           +D+
Sbjct: 242 LDV 244


>gi|34556884|ref|NP_906699.1| hypothetical protein WS0457 [Wolinella succinogenes DSM 1740]
 gi|34482599|emb|CAE09599.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 315

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)

Query: 106 VEITIEANPSSV--EVNNFQG-YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           V I+I     SV  E+ +F G Y +     I  G+QS+ +++L  + R H++SE    I 
Sbjct: 130 VGISIGTRIDSVNHEILDFLGEYAREKEVWIEYGIQSIHDRTLEGINRGHDSSEMEYWIK 189

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
             +N   ++   LIY LP ++       L + + +  + + ++ L +   T    ++K G
Sbjct: 190 ETQNRGIKVCVHLIYGLPGESEEMMLETLDKMIEWQAESIKIHPLYVMAHTALATLYKKG 249

Query: 223 D 223
           +
Sbjct: 250 E 250


>gi|257462243|ref|ZP_05626660.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|317059912|ref|ZP_07924397.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313685588|gb|EFS22423.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 348

 Score = 39.3 bits (90), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 56/127 (44%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I +   P  +     +  +K GV  I LG+QSL+E+ LR   R ++ ++ + +I   ++ 
Sbjct: 92  IRLSTRPDYIRKEILEQLKKYGVKAIELGIQSLDEEVLRKSDRAYSETQVLESIRQIQDY 151

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +   L+  LP   + +    ++  ++   D   +Y   +   T   K ++ G+    
Sbjct: 152 GFEVGIQLMVGLPASNLEKEIRTVKTLIACRPDTARIYPTLVLADTELEKQYRRGEYQAL 211

Query: 228 SENVAVD 234
           S   AV+
Sbjct: 212 SLEEAVE 218


>gi|289805405|ref|ZP_06536034.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 261

 Score = 39.3 bits (90), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 93  YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 143

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 144 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEK 202

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 203 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 251


>gi|218691501|ref|YP_002399713.1| putative Fe-S oxidoreductase [Escherichia coli ED1a]
 gi|218429065|emb|CAR09872.1| putative Fe-S oxidoreductase [Escherichia coli ED1a]
          Length = 309

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LA     ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLACERGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|308160323|gb|EFO62816.1| Histone acetyltransferase Elp3 [Giardia lamblia P15]
          Length = 588

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)

Query: 65  LTGPRS-----ISSIFFG------GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           L+ PRS     IS I+ G       G    I P++I+       K       V +TIE  
Sbjct: 175 LSTPRSYRDSFISGIYTGLTGHIPAGPRRTIVPESISYAARSSIKC------VALTIETR 228

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P   E  +     + G  R+ +GVQS+ +     + R H     I     +++   +M  
Sbjct: 229 PDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQSKDAGFKMIA 288

Query: 174 DLIYALPKQTMTQWEM----ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            ++  LP  T T  ++    EL ++ +Y  D L +Y   I +GT  Y+
Sbjct: 289 HMMPNLPF-TSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYE 335


>gi|167747917|ref|ZP_02420044.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
 gi|167652648|gb|EDR96777.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
          Length = 312

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 91/207 (43%), Gaps = 15/207 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+     +R+++     +Q  L + +  R+     SI  IF   G   + + + +  
Sbjct: 53  CIFCNMYKE-KRFRMRP---LQDVLADFREAREYYN--SIGKIFLADGDALICKNEYLNE 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IL  I +   +    ++T  A+P SV +      +  R+ G++ + +G++S   Q L+F+
Sbjct: 107 ILKYIREE--IPECRQVTCYASPKSVMIKTKEELRELRENGLDMVYMGLESGNAQVLKFM 164

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYAL-PKQTMTQWEMELQRALS-YAVDHLSLYQ 206
            +     E I +    +    R+S   I  L  K+   +  ++  +  S    D++ L  
Sbjct: 165 KKGATPDEMIQSASKIKQAGIRLSVTAISGLGGKKLWMEHAVDTGKVFSAMKPDYIGLLT 224

Query: 207 LTIEKGTLFYKMHKDG--DLVLPSENV 231
           L IE G    +  + G  +L+ P +N+
Sbjct: 225 LMIEPGLPLEEKIRSGEFELITPYDNL 251


>gi|78356044|ref|YP_387493.1| hypothetical protein Dde_0997 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218449|gb|ABB37798.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 368

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 18/180 (10%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFG------GGTPSLIEPQNIALILDGIAKNWTVSS 104
           ++QSF      + +L G  S    F G      G  P  ++ Q +  I   I +      
Sbjct: 93  YLQSFSNTYGPVEKLEGVLSQIEGFTGVVGAGIGTRPDCLDEQRLDRIARSIGR------ 146

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
            ++  + A  S ++     G  KAG    + LG+QS  + +LR + R H+ +  + A+H+
Sbjct: 147 -IDAALAA--SGIQPQGICG--KAGAEVWLELGLQSSSDATLRRINRGHDFACFVKAVHM 201

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           A     ++   LI  LP +T   +   +    +  V  +  + L + + T    M + G+
Sbjct: 202 AHERGLKVCAHLIAGLPGETGADFARTVADVAALPVAGVKFHGLYVAEHTAVAAMWRSGE 261


>gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 614

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           + +G+QS     +R + R+ +A    E IA +H A   +     DL+Y LP         
Sbjct: 268 VQIGLQSANPDVVRHVHRHFDAELFQEKIALLHFAEVTY---GIDLMYGLPGDDEAGMRH 324

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            L+  L    +H+ L+ L +  GT  Y  H 
Sbjct: 325 SLEFVLQLQPNHIDLFPLAVLPGTELYHQHS 355


>gi|325115777|emb|CBZ51332.1| putative elongator complex protein 3 [Neospora caninum Liverpool]
          Length = 974

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 20/177 (11%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +     +  R+ G  R+ LG+Q +E + L+++ R     +A+ AI L +
Sbjct: 379 IGLTLETRPDFINRFEIRKLRRFGCTRVQLGLQHVENEVLQYINRGCERHDAVKAIRLLK 438

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQR------ALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP  T    E +L+       +     D   LY   +   +   + +
Sbjct: 439 DSGYKVDIHIMPDLPSSTA---ERDLRMFFYLLGSSDLQADQWKLYPCEVTPFSEIERWY 495

Query: 220 KDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAY--------EISNHSFLGAESLHNL 267
            +G  V  +E +   +L +L   + +A  +H +        +I N S +   ++ NL
Sbjct: 496 SEGSFVPYAEKDGGRELVDLLLRVKAA--VHPWIRLNRVVRDIPNQSIIAGNNITNL 550


>gi|82778525|ref|YP_404874.1| hypothetical protein SDY_3392 [Shigella dysenteriae Sd197]
 gi|309785539|ref|ZP_07680170.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
 gi|81242673|gb|ABB63383.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308926659|gb|EFP72135.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
          Length = 309

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LA     ++   LI  LP +   +    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTQLACQRGLKVCSHLIVGLPGEGQAECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+ L I KG++  K  + G L      + ++ Y LT
Sbjct: 202 RVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL----NGIELEDYTLT 244


>gi|303231484|ref|ZP_07318214.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513827|gb|EFL55839.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 326

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYHTLDKINRGHDLAQFIDAVLRIKRYGFNVTTHMIVNLPWDTMED-TIEGA 207

Query: 193 RAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           + L S  VD + L+ L I K TL  K +++G + L S
Sbjct: 208 KILSSLGVDQVKLHALYIVKNTLMAKWYEEGQITLIS 244


>gi|205351955|ref|YP_002225756.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207856135|ref|YP_002242786.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|229890644|sp|B5QWC1|MIAB_SALEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890645|sp|B5R817|MIAB_SALG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|205271736|emb|CAR36570.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206707938|emb|CAR32227.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326626994|gb|EGE33337.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 474

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 20/173 (11%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T +  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETNDDFEK 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++       D    +  +   GT    M  D    +P E     LY L + I
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD----VPEEEKKQRLYILQERI 369


>gi|254700783|ref|ZP_05162611.1| RNA modification protein [Brucella suis bv. 5 str. 513]
 gi|261751292|ref|ZP_05995001.1| RNA modification protein [Brucella suis bv. 5 str. 513]
 gi|261741045|gb|EEY28971.1| RNA modification protein [Brucella suis bv. 5 str. 513]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|260760773|ref|ZP_05873116.1| RNA modification protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260671205|gb|EEX58026.1| RNA modification protein [Brucella abortus bv. 2 str. 86/8/59]
          Length = 380

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 202 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 261

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 262 MQLVRDVNYA 271


>gi|258544941|ref|ZP_05705175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
           ATCC 15826]
 gi|258519861|gb|EEV88720.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
           ATCC 15826]
          Length = 456

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
            F GGT  L         +DGI +  +T S  VE T          N  + YR+    V+
Sbjct: 213 LFDGGTADLALLIEYVAAIDGIDRVRFTTSHPVEFTD---------NLIEVYRRVPQLVS 263

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            + L VQS  ++ L  + R H A++    +   R I P +SF  D I   P +    +E 
Sbjct: 264 HLHLPVQSGSDKVLALMKRGHKAAQYKEKLARLREIRPNISFSSDFIVGFPGEEDADFEA 323

Query: 190 ELQ 192
            +Q
Sbjct: 324 TMQ 326


>gi|17988259|ref|NP_540893.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis bv. 1 str. 16M]
 gi|225853579|ref|YP_002733812.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis ATCC 23457]
 gi|256045757|ref|ZP_05448635.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112476|ref|ZP_05453397.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           bv. 3 str. Ether]
 gi|256262937|ref|ZP_05465469.1| RNA modification protein [Brucella melitensis bv. 2 str. 63/9]
 gi|260563053|ref|ZP_05833539.1| RNA modification protein [Brucella melitensis bv. 1 str. 16M]
 gi|265992174|ref|ZP_06104731.1| RNA modification protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993912|ref|ZP_06106469.1| RNA modification protein [Brucella melitensis bv. 3 str. Ether]
 gi|81851031|sp|Q8YEA2|MIAB_BRUME RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|17984028|gb|AAL53157.1| miab protein [Brucella melitensis bv. 1 str. 16M]
 gi|225641944|gb|ACO01858.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           ATCC 23457]
 gi|260153069|gb|EEW88161.1| RNA modification protein [Brucella melitensis bv. 1 str. 16M]
 gi|262764893|gb|EEZ10814.1| RNA modification protein [Brucella melitensis bv. 3 str. Ether]
 gi|263003240|gb|EEZ15533.1| RNA modification protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092811|gb|EEZ16986.1| RNA modification protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326410151|gb|ADZ67216.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis M28]
 gi|326539870|gb|ADZ88085.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           M5-90]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|62290991|ref|YP_222784.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82700900|ref|YP_415474.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis biovar Abortus 2308]
 gi|189025203|ref|YP_001935971.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           abortus S19]
 gi|237816493|ref|ZP_04595486.1| RNA modification enzyme, MiaB family [Brucella abortus str. 2308 A]
 gi|254690285|ref|ZP_05153539.1| hypothetical protein Babob68_08952 [Brucella abortus bv. 6 str.
           870]
 gi|254694773|ref|ZP_05156601.1| hypothetical protein Babob3T_08948 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254731314|ref|ZP_05189892.1| hypothetical protein Babob42_08980 [Brucella abortus bv. 4 str.
           292]
 gi|256258538|ref|ZP_05464074.1| hypothetical protein Babob9C_14557 [Brucella abortus bv. 9 str.
           C68]
 gi|260546254|ref|ZP_05821994.1| RNA modification protein [Brucella abortus NCTC 8038]
 gi|260755825|ref|ZP_05868173.1| RNA modification protein [Brucella abortus bv. 6 str. 870]
 gi|260759048|ref|ZP_05871396.1| RNA modification protein [Brucella abortus bv. 4 str. 292]
 gi|260884850|ref|ZP_05896464.1| RNA modification protein [Brucella abortus bv. 9 str. C68]
 gi|261215100|ref|ZP_05929381.1| RNA modification protein [Brucella abortus bv. 3 str. Tulya]
 gi|297247377|ref|ZP_06931095.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella abortus bv. 5
           str. B3196]
 gi|75496027|sp|Q57AB1|MIAB_BRUAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123740938|sp|Q2YQS8|MIAB_BRUA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890451|sp|B2S9E5|MIAB_BRUA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|62197123|gb|AAX75423.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82617001|emb|CAJ12110.1| Deoxyribonuclease/rho motif-related TRAM:Protein of unknown
           function UPF0004:tRNA-i(6)A37 modification enzyme
           MiaB:Elongator [Brucella melitensis biovar Abortus 2308]
 gi|189020775|gb|ACD73497.1| hypothetical protein BAbS19_I20150 [Brucella abortus S19]
 gi|237788560|gb|EEP62775.1| RNA modification enzyme, MiaB family [Brucella abortus str. 2308 A]
 gi|260096361|gb|EEW80237.1| RNA modification protein [Brucella abortus NCTC 8038]
 gi|260669366|gb|EEX56306.1| RNA modification protein [Brucella abortus bv. 4 str. 292]
 gi|260675933|gb|EEX62754.1| RNA modification protein [Brucella abortus bv. 6 str. 870]
 gi|260874378|gb|EEX81447.1| RNA modification protein [Brucella abortus bv. 9 str. C68]
 gi|260916707|gb|EEX83568.1| RNA modification protein [Brucella abortus bv. 3 str. Tulya]
 gi|297174546|gb|EFH33893.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella abortus bv. 5
           str. B3196]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|256060114|ref|ZP_05450296.1| RNA modification protein [Brucella neotomae 5K33]
 gi|261324091|ref|ZP_05963288.1| RNA modification protein [Brucella neotomae 5K33]
 gi|261300071|gb|EEY03568.1| RNA modification protein [Brucella neotomae 5K33]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|163844167|ref|YP_001628572.1| RNA modification protein [Brucella suis ATCC 23445]
 gi|229890454|sp|B0CK00|MIAB_BRUSI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|163674890|gb|ABY39001.1| RNA modification enzyme, MiaB family [Brucella suis ATCC 23445]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|23503001|ref|NP_699128.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella suis
           1330]
 gi|161620062|ref|YP_001593949.1| RNA modification protein [Brucella canis ATCC 23365]
 gi|225626520|ref|ZP_03784559.1| RNA modification enzyme, MiaB family protein [Brucella ceti str.
           Cudo]
 gi|254705152|ref|ZP_05166980.1| RNA modification protein [Brucella suis bv. 3 str. 686]
 gi|254707331|ref|ZP_05169159.1| RNA modification protein [Brucella pinnipedialis M163/99/10]
 gi|254709128|ref|ZP_05170939.1| RNA modification protein [Brucella pinnipedialis B2/94]
 gi|254713447|ref|ZP_05175258.1| RNA modification protein [Brucella ceti M644/93/1]
 gi|254716197|ref|ZP_05178008.1| RNA modification protein [Brucella ceti M13/05/1]
 gi|256030653|ref|ZP_05444267.1| RNA modification protein [Brucella pinnipedialis M292/94/1]
 gi|256158655|ref|ZP_05456538.1| RNA modification protein [Brucella ceti M490/95/1]
 gi|256254059|ref|ZP_05459595.1| RNA modification protein [Brucella ceti B1/94]
 gi|260169557|ref|ZP_05756368.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella sp.
           F5/99]
 gi|260567379|ref|ZP_05837849.1| RNA modification protein [Brucella suis bv. 4 str. 40]
 gi|261217971|ref|ZP_05932252.1| RNA modification protein [Brucella ceti M13/05/1]
 gi|261221200|ref|ZP_05935481.1| RNA modification protein [Brucella ceti B1/94]
 gi|261314813|ref|ZP_05954010.1| RNA modification protein [Brucella pinnipedialis M163/99/10]
 gi|261316628|ref|ZP_05955825.1| RNA modification protein [Brucella pinnipedialis B2/94]
 gi|261321179|ref|ZP_05960376.1| RNA modification protein [Brucella ceti M644/93/1]
 gi|261755857|ref|ZP_05999566.1| RNA modification protein [Brucella suis bv. 3 str. 686]
 gi|261759085|ref|ZP_06002794.1| RNA modification protein [Brucella sp. F5/99]
 gi|265987700|ref|ZP_06100257.1| RNA modification protein [Brucella pinnipedialis M292/94/1]
 gi|265997161|ref|ZP_06109718.1| RNA modification protein [Brucella ceti M490/95/1]
 gi|294851378|ref|ZP_06792051.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella sp. NVSL
           07-0026]
 gi|81751814|sp|Q8FXU4|MIAB_BRUSU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890452|sp|A9M9Y3|MIAB_BRUC2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|23349040|gb|AAN31043.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161336873|gb|ABX63178.1| RNA modification enzyme, MiaB family [Brucella canis ATCC 23365]
 gi|225618177|gb|EEH15220.1| RNA modification enzyme, MiaB family protein [Brucella ceti str.
           Cudo]
 gi|260156897|gb|EEW91977.1| RNA modification protein [Brucella suis bv. 4 str. 40]
 gi|260919784|gb|EEX86437.1| RNA modification protein [Brucella ceti B1/94]
 gi|260923060|gb|EEX89628.1| RNA modification protein [Brucella ceti M13/05/1]
 gi|261293869|gb|EEX97365.1| RNA modification protein [Brucella ceti M644/93/1]
 gi|261295851|gb|EEX99347.1| RNA modification protein [Brucella pinnipedialis B2/94]
 gi|261303839|gb|EEY07336.1| RNA modification protein [Brucella pinnipedialis M163/99/10]
 gi|261739069|gb|EEY27065.1| RNA modification protein [Brucella sp. F5/99]
 gi|261745610|gb|EEY33536.1| RNA modification protein [Brucella suis bv. 3 str. 686]
 gi|262551629|gb|EEZ07619.1| RNA modification protein [Brucella ceti M490/95/1]
 gi|264659897|gb|EEZ30158.1| RNA modification protein [Brucella pinnipedialis M292/94/1]
 gi|294819967|gb|EFG36966.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella sp. NVSL
           07-0026]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|322368924|ref|ZP_08043491.1| histone acetyltransferase, ELP3 family protein [Haladaptatus
           paucihalophilus DX253]
 gi|320551655|gb|EFW93302.1| histone acetyltransferase, ELP3 family protein [Haladaptatus
           paucihalophilus DX253]
          Length = 553

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 94  DGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           D IA+N T    N+  T E  P   +        + G  ++ +GVQ+  E+  R + R H
Sbjct: 215 DVIAENETGDIRNIGTTFETKPDWCDPEQINRMLELGGTKVEVGVQTTFERINREMHRGH 274

Query: 153 NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTI 209
            A  +I A    R+   ++ F ++   P  +      + +R      +  D+L +Y   +
Sbjct: 275 GAQASIEANQRLRDSAFKVGFHMMPGQPGMSKEMCVEDFRRIFEDEKWKPDYLKIYPTLV 334

Query: 210 EKGTLFY 216
            +GT  Y
Sbjct: 335 VRGTATY 341


>gi|313759752|gb|ADR79188.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
          Length = 144

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 5/127 (3%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFTQT 60

Query: 191 LQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAH 246
           +   L    D L+L+   ++       K+ K+ D+    E  A+  Y    LT++   A 
Sbjct: 61  IADILHMRPDRLALFSFASVPWIKPHQKVMKESDMPSMEEKFAIYSYARHTLTKAGYQAI 120

Query: 247 GLHAYEI 253
           GL  + +
Sbjct: 121 GLDHFSL 127


>gi|315428006|dbj|BAJ49595.1| elongator complex protein 3 [Candidatus Caldiarchaeum subterraneum]
          Length = 499

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+E  P   +        + GV R+ +GVQ+L+++ L  L R H+  + + A    ++ 
Sbjct: 177 ITVETKPDWAKREKAVQLVEYGVTRVEIGVQALDDKILTTLNRGHSVEDVVEATADLKDT 236

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGT--------LF 215
             ++ + ++  LP  T    ++ +   L     +  D L +Y   +  GT          
Sbjct: 237 AFKVCYHIMPNLPGST-PHKDLNMFTTLFDDDRFRPDQLKIYPTLVLPGTGLETMWRHGL 295

Query: 216 YKMHKDGDLV 225
           YK + D +LV
Sbjct: 296 YKPYSDDELV 305


>gi|195117986|ref|XP_002003521.1| GI22150 [Drosophila mojavensis]
 gi|193914096|gb|EDW12963.1| GI22150 [Drosophila mojavensis]
          Length = 563

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H  +       + +
Sbjct: 218 IGITIETRPDYCLKRHITDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVAAVCETFKMGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|241206754|ref|YP_002977850.1| MiaB-like tRNA modifying enzyme [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860644|gb|ACS58311.1| MiaB-like tRNA modifying enzyme [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 424

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q  ++  L+ + R H  ++A+  I  AR + P MSF  D+I   P +T   ++  
Sbjct: 251 LHLSLQHGDDMILKRMKRRHLRADALRFIEDARRLRPEMSFGADMIAGFPTETEEMFDNA 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++ A    + HL ++  ++  GT   +M
Sbjct: 311 VRLAEEANIAHLHVFPYSLRPGTPAARM 338


>gi|148559930|ref|YP_001259948.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella ovis
           ATCC 25840]
 gi|229890453|sp|A5VTA1|MIAB_BRUO2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|148371187|gb|ABQ61166.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella ovis ATCC 25840]
          Length = 467

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 289 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 348

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 349 MQLVRDVNYA 358


>gi|256845665|ref|ZP_05551123.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256719224|gb|EEU32779.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 297

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+   +++   R L   R++  IF   G  +L+ P +I 
Sbjct: 31  RCSFCSMYKD-KKFVIKP---IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALVVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++++L+
Sbjct: 86  IQVLDYIKEVFPECKRVSIYGTAIAIHQKSVE--DLKKLYEKGLTLVYLGVESGDDEALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + L++ I      DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---IVELSKKIM-STGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            + S+  L + +GT  Y + ++G
Sbjct: 200 KYASILNLRLYEGTELYNLMQEG 222


>gi|313759742|gb|ADR79183.1| coproporphyrinogen III oxidase [Chlamydophila abortus]
 gi|313759754|gb|ADR79189.1| coproporphyrinogen III oxidase [Chlamydophila abortus]
          Length = 144

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSYEESLYAYEKFRELGFESINIDLIYGLPKQTKVTFTQT 60

Query: 191 LQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAH 246
           +   L    D L+L+   ++       K  K+ D+    E  A+  Y    LT++   A 
Sbjct: 61  IADILHMRPDRLALFSFASVPWIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQAI 120

Query: 247 GLHAYEI 253
           GL  + +
Sbjct: 121 GLDHFSL 127


>gi|254166689|ref|ZP_04873543.1| radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|289596366|ref|YP_003483062.1| Radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|197624299|gb|EDY36860.1| radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|289534153|gb|ADD08500.1| Radical SAM domain protein [Aciduliprofundum boonei T469]
          Length = 459

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 17/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C  +    +   G  +     + E++ +R+  G + I    F   T +L  P+
Sbjct: 199 CPFNCAFCSSSLQFGKRWRGHSD--SRVIEELKILREEYGRKEIE---FLDDTFTLNRPR 253

Query: 88  NIALIL----DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            I +      +G+  +WT SS V+I         EV +   Y   G + +  G++S  ++
Sbjct: 254 AIRISKMIRKEGLDISWTASSRVDIFTN------EVADALKY--GGCHTVYFGIESGSQK 305

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L F+G+     +++AA+  AR          I   P++T    +  ++ +    VD+  
Sbjct: 306 TLDFIGKRITPEQSLAAVKKARAHKLHALGAFIIGFPEETKEDIKKTIKFSKKVGVDYAQ 365

Query: 204 LYQLTIEKGTLFYKMHKDGDLVL 226
               T   GT  +      +L+L
Sbjct: 366 FTVATPYPGTRLWNYAMARNLIL 388


>gi|158296831|ref|XP_317165.4| AGAP008300-PA [Anopheles gambiae str. PEST]
 gi|157014901|gb|EAA43860.4| AGAP008300-PA [Anopheles gambiae str. PEST]
          Length = 548

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 218 IGITIETRPDYCLKRHLSDLLSYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSK 277

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E      +  D L +Y   + +GT  Y++ K 
Sbjct: 278 DAGFKVVSHMMPDLPNVDIERDIEQF-IEFFENPDFRADGLKIYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDL 235
           G       +  VDL
Sbjct: 337 GRYKSYPPSTLVDL 350


>gi|332159332|ref|YP_004424611.1| methyltransferase [Pyrococcus sp. NA2]
 gi|331034795|gb|AEC52607.1| methyltransferase [Pyrococcus sp. NA2]
          Length = 465

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 17/201 (8%)

Query: 32  CPY-CDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           CP+ C F S   ++ K  + + +   + E+  +R   G + I    F   T +L   + I
Sbjct: 200 CPFNCVFCSSSLQFGKRWRGHSVDRVIEELSILRNEYGKKEIE---FLDDTFTLNRKRAI 256

Query: 90  ALIL----DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +    +G+   WT SS V        ++      +  ++ G + I  G++S  ++ L
Sbjct: 257 DIAMRIKREGLDITWTASSRV--------NTFNEKIAKAMKEGGCHTIYFGIESGSQRIL 308

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            F+G+     ++I A+  A+    R     I   P +T  + E  ++ A    VD     
Sbjct: 309 DFIGKGITPKQSIDAVKTAKKAGLRTLGSFIIGFPDETREEVETTIRFAKKVGVDFAQFT 368

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
             T   GT  +    + +L+L
Sbjct: 369 IATPYPGTRLWAYAVEHNLLL 389


>gi|254696401|ref|ZP_05158229.1| hypothetical protein Babob28_01463 [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE-- 188
           + L VQS  ++ L+ + R H A E +  I   RN+ P M+   D I   P +T   +E  
Sbjct: 210 LHLPVQSGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDT 269

Query: 189 MELQRALSYA 198
           M+L R ++YA
Sbjct: 270 MQLVRDVNYA 279


>gi|19173436|ref|NP_597239.1| similarity to HYPOTHETICAL PROTEIN YB36_METJA [Encephalitozoon
           cuniculi GB-M1]
 gi|19171025|emb|CAD26415.1| similarity to HYPOTHETICAL PROTEIN YB36_METJA [Encephalitozoon
           cuniculi GB-M1]
          Length = 613

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +       G  RI +GVQS+ E   R   R H       +  LA+
Sbjct: 257 VGITIETRPDFCVRPHLSKMLGYGCTRIEVGVQSVYEDVARDTNRGHTVESVCESFALAK 316

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +       +  D L +Y   + KGT  +++ K+ 
Sbjct: 317 DAGFKIVAHMMPNLPNVPMKRDLAQFREYFDNPGFRSDGLKIYPTLVIKGTGLFELWKNN 376

Query: 223 DLVLPSENVAVDL 235
                S +  +DL
Sbjct: 377 KYRNYSPDELIDL 389


>gi|168045175|ref|XP_001775054.1| RNA polymerase II elongator complex, subunit ELP3/histone
           acetyltransferase [Physcomitrella patens subsp. patens]
 gi|162673641|gb|EDQ60161.1| RNA polymerase II elongator complex, subunit ELP3/histone
           acetyltransferase [Physcomitrella patens subsp. patens]
          Length = 566

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 6/122 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 231 IGLTIETRPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVEDCFRLAK 290

Query: 166 NI-FPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHK 220
           +  F  +   ++  LP   M + +ME  R      ++  D L LY   + +GT  Y++ K
Sbjct: 291 DAGFKVIVAHMMPNLPNVDM-ERDMESFREFFENPAFRTDGLKLYPTLVIRGTGLYELWK 349

Query: 221 DG 222
            G
Sbjct: 350 TG 351


>gi|45359058|ref|NP_988615.1| radical SAM family protein [Methanococcus maripaludis S2]
 gi|45047933|emb|CAF31051.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 332

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 13/157 (8%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           ++F  GT +   P+ +  + D      +    + I+I   P  +E   ++  + Y K G 
Sbjct: 110 VYFYPGTNTHASPEYLKELWDFAL---SFDDVLGISIGTRPDCLEDEKLDILENYVKEGY 166

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              I LG+Q++ +++L FL R H++ +    +   +     +   +I  LP ++   W+M
Sbjct: 167 EIWIDLGIQTMHDKTLDFLNRKHSSDDVRRVLLECKKRGILVCGHIILGLPDES---WDM 223

Query: 190 ELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            ++ A       +D L +Y L + + T   +++  G+
Sbjct: 224 MMETAKILSDLEIDALKIYPLVVVENTKLEEIYWKGE 260


>gi|315425164|dbj|BAJ46834.1| RNA polymerase II complex ELP3 subunit [Candidatus Caldiarchaeum
           subterraneum]
 gi|315426672|dbj|BAJ48298.1| elongator complex protein 3 [Candidatus Caldiarchaeum subterraneum]
          Length = 499

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+E  P   +        + GV R+ +GVQ+L+++ L  L R H+  + + A    ++ 
Sbjct: 177 ITVETKPDWAKREKAVQLVEYGVTRVEIGVQALDDKILTTLNRGHSVEDVVEATADLKDT 236

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGT--------LF 215
             ++ + ++  LP  T    ++ +   L     +  D L +Y   +  GT          
Sbjct: 237 AFKVCYHIMPNLPGST-PHKDLNMFTTLFDDDRFRPDQLKIYPTLVLPGTGLETMWRHGL 295

Query: 216 YKMHKDGDLV 225
           YK + D +LV
Sbjct: 296 YKPYSDDELV 305


>gi|269137886|ref|YP_003294586.1| putative Fe-S oxidoreductase [Edwardsiella tarda EIB202]
 gi|267983546|gb|ACY83375.1| putative Fe-S oxidoreductase [Edwardsiella tarda EIB202]
 gi|304557939|gb|ADM40603.1| Predicted Fe-S oxidoreductase [Edwardsiella tarda FL6-60]
          Length = 316

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV ++    YR+ G    + LG+QS  +++LR + R H+ +        AR    ++ 
Sbjct: 138 PESV-LDLLAEYREQGYEVWLELGLQSANDKTLRRINRGHDFACYQRTTRAARARGLKVC 196

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             LI  LP ++       LQR +   V+ + L+ L I  G++  K  + G L
Sbjct: 197 SHLIVGLPGESHADCLDTLQRVVETGVEGIKLHPLHIVTGSVLAKAWQAGRL 248


>gi|169336950|ref|ZP_02863141.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
 gi|169296209|gb|EDS78342.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
          Length = 108

 Score = 39.3 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--- 72
           S++L +Y+H PFC+ KC YC+  S     +     ++   + E++ +  +   R  S   
Sbjct: 44  SDNLTLYIHIPFCMNKCGYCNLFSTTAFNQYKMNKYVDKLIKEIKAVENILDLRDKSIFG 103

Query: 73  SIFFG 77
           S+ FG
Sbjct: 104 SVIFG 108


>gi|313126156|ref|YP_004036426.1| histone acetyltransferase, elp3 family [Halogeometricum borinquense
           DSM 11551]
 gi|312292521|gb|ADQ66981.1| histone acetyltransferase, ELP3 family [Halogeometricum borinquense
           DSM 11551]
          Length = 586

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 12/177 (6%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL--ILDGIAKNWTVS-S 104
           QE F++  L  M      + P+      F        +P+++    + D IA+N T    
Sbjct: 207 QEWFVKRALEAMNDYDLDSDPQPAEDQSFKP------DPEDVEFRYLEDVIAENETADVR 260

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    ++ A    
Sbjct: 261 NIGTTFETKPDWCDPEQINRMLDLGATKVEVGVQTTYERINREMHRGHGVQASLDANRRL 320

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKM 218
           R+   ++ F ++   P  T      + ++      +  D+L +Y   + + T+ Y M
Sbjct: 321 RDSAFKVGFHMMPGQPGMTKEMCVEDFRQLFENSDWRPDYLKIYPTLVVRDTITYDM 377


>gi|108809738|ref|YP_653654.1| hypothetical protein YPA_3747 [Yersinia pestis Antiqua]
 gi|108781651|gb|ABG15709.1| hypothetical protein YPA_3747 [Yersinia pestis Antiqua]
          Length = 316

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 149 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLE 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G+   K  + G L   +  +A++ Y LT
Sbjct: 209 KVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALA--LALEDYVLT 253


>gi|195388168|ref|XP_002052755.1| GJ20018 [Drosophila virilis]
 gi|194149212|gb|EDW64910.1| GJ20018 [Drosophila virilis]
          Length = 556

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H         ++ +
Sbjct: 218 IGITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCETFNMGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|195035705|ref|XP_001989312.1| GH10129 [Drosophila grimshawi]
 gi|193905312|gb|EDW04179.1| GH10129 [Drosophila grimshawi]
          Length = 561

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H         ++ +
Sbjct: 218 IGITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCETFNMGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++++ + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVTHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           K G       ++ VDL
Sbjct: 335 KTGRYKSYPPSMLVDL 350


>gi|291557095|emb|CBL34212.1| Histone acetyltransferase [Eubacterium siraeum V10Sc8a]
          Length = 330

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 6/209 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++ V++    C   C +C+  +     +   E  ++S L E Q +  L    + + I F
Sbjct: 4   TNISVFIPHYGCTHICSFCNQKTISGHSEPVTEKELESIL-EGQ-LENLKDSGTKAQIAF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRI 133
            GG+ + I+   +  +L  +AK++T +   +   I     P  ++       +  G+  I
Sbjct: 62  FGGSFTAIDRDYMIRLLT-VAKHYTDAYPEQYDGIRCSTRPDCIDEEILGILKSYGMTAI 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG QS+ ++ L    R H A +   A  L +     +   ++  L K T        + 
Sbjct: 121 ELGAQSMNDEVLTANRRGHTAEDVRRASRLIKQSGFELGLQMMTGLYKDTEQYCIDTAKE 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            ++   D + +Y   I K T   ++H+ G
Sbjct: 181 FIALHCDTVRIYPTVILKNTELGRLHESG 209


>gi|270263223|ref|ZP_06191493.1| putative Fe-S oxidoreductase [Serratia odorifera 4Rx13]
 gi|270042911|gb|EFA16005.1| putative Fe-S oxidoreductase [Serratia odorifera 4Rx13]
          Length = 308

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQS 144
           ++L+ D   +    +  + I +   P  V    ++   GY + G    + LG+Q+  +++
Sbjct: 94  VSLLADMYRQALAQADMIGICVGTRPDCVPPAALDLLAGYLEQGYEVWLELGLQTAHDKT 153

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R HN S       LAR    ++   LI  LP +        L++ +   VD + L
Sbjct: 154 LKRINRGHNFSCYQHTARLARERGLKVCSHLIVGLPGENSADHLATLRQVVDSGVDGIKL 213

Query: 205 YQLTIEKGTLFYKMHKDGDL 224
           + L I  G+   +  + G +
Sbjct: 214 HPLHIVTGSTLARAWQAGRM 233


>gi|94986872|ref|YP_594805.1| coproporphyrinogen III oxidase-like protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731121|emb|CAJ54483.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 356

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 11/211 (5%)

Query: 21  VYVHWPFCVKKCPY-CDFNSHVRRYKVG--------QENFIQSFLTEMQWMRQLTGPRSI 71
           + +  PF  + CP+ C F +  ++  +G         +N    F    +     +  + +
Sbjct: 24  IPIFLPF--EGCPHRCIFCAQDKQTGLGYGGSKISLSDNLANLFTRLKKEKNTFSSEKLL 81

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             I F GGT +L+   ++ L L+ + +               P +V        + AG+N
Sbjct: 82  PEIAFYGGTFTLLPTASMQLCLNMVKQCLAEGLISGARCSTRPDAVSPAILTKLKAAGIN 141

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LGVQS    +L  + R +         +   +   R+   L+  +P  T   +  ++
Sbjct: 142 LIELGVQSFSNIALSLVRRGYTQHIIKEGCYNILSAGLRLGIQLLPGMPGSTAEVFLNDV 201

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +++L      L  Y   +  GT    + + G
Sbjct: 202 EQSLEQNPACLRFYPCLVVDGTQLADIWRKG 232


>gi|238756105|ref|ZP_04617426.1| hypothetical protein yruck0001_2600 [Yersinia ruckeri ATCC 29473]
 gi|238705644|gb|EEP98040.1| hypothetical protein yruck0001_2600 [Yersinia ruckeri ATCC 29473]
          Length = 299

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 101 TVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASE 156
           T +  V I +   P  V    ++    Y + G    + LG+Q+  +++L+ + R H+ + 
Sbjct: 106 TEADIVGICVGTRPDCVPDAVLDLLSSYHQQGYEVWLELGLQTANDKTLKRINRGHDFAS 165

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
                  AR    ++   LI  LP +   Q    LQ+     VD L L+ L I +G+   
Sbjct: 166 YQHTARRARARGLKVCCHLIVGLPGEDQAQGLQTLQQVADTGVDGLKLHPLHIVEGSTMA 225

Query: 217 KMHKDGDL 224
           K  + G L
Sbjct: 226 KAWRAGRL 233


>gi|221125926|ref|XP_002155361.1| PREDICTED: similar to GL15175, partial [Hydra magnipapillata]
          Length = 545

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 214 IGITIETRPDYCLKRHISSMLLYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFQLGK 273

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M    +  +E     ++  D L +Y   + +GT  Y++ K G
Sbjct: 274 DSGYKVIAHMMPDLPNVDMERDIEQFVEFFENPAFRADGLKIYPTLVIRGTGLYELWKTG 333

Query: 223 DLVLPSENVAVDL 235
                     VDL
Sbjct: 334 RYKSYPPGALVDL 346


>gi|270488044|ref|ZP_06205118.1| conserved domain protein [Yersinia pestis KIM D27]
 gi|270336548|gb|EFA47325.1| conserved domain protein [Yersinia pestis KIM D27]
          Length = 117

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 35/74 (47%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGG 78
           L   R +S + +GG
Sbjct: 99  LFTGRQVSQMHWGG 112


>gi|22124047|ref|NP_667470.1| hypothetical protein y0127 [Yersinia pestis KIM 10]
 gi|45443541|ref|NP_995080.1| hypothetical protein YP_3810 [Yersinia pestis biovar Microtus str.
           91001]
 gi|166212030|ref|ZP_02238065.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167469339|ref|ZP_02334043.1| Uncharacterized Fe-S oxidoreductase [Yersinia pestis FV-1]
 gi|170022782|ref|YP_001719287.1| putative radical SAM protein [Yersinia pseudotuberculosis YPIII]
 gi|186896984|ref|YP_001874096.1| putative radical SAM protein [Yersinia pseudotuberculosis PB1/+]
 gi|270488526|ref|ZP_06205600.1| radical SAM protein, TIGR01212 family [Yersinia pestis KIM D27]
 gi|21956793|gb|AAM83721.1|AE013613_1 hypothetical protein y0127 [Yersinia pestis KIM 10]
 gi|45438410|gb|AAS63957.1| Uncharacterized Fe-S oxidoreductases [Yersinia pestis biovar
           Microtus str. 91001]
 gi|166206776|gb|EDR51256.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|169749316|gb|ACA66834.1| conserved hypothetical radical SAM protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186700010|gb|ACC90639.1| conserved hypothetical radical SAM protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|262363384|gb|ACY60105.1| hypothetical protein YPD4_3201 [Yersinia pestis D106004]
 gi|262367238|gb|ACY63795.1| hypothetical protein YPD8_3125 [Yersinia pestis D182038]
 gi|270337030|gb|EFA47807.1| radical SAM protein, TIGR01212 family [Yersinia pestis KIM D27]
          Length = 329

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 164 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLE 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G+   K  + G L      +A++ Y LT
Sbjct: 224 KVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLT----ALALEDYVLT 266


>gi|108813598|ref|YP_649365.1| hypothetical protein YPN_3438 [Yersinia pestis Nepal516]
 gi|145597657|ref|YP_001161733.1| hypothetical protein YPDSF_0341 [Yersinia pestis Pestoides F]
 gi|108777246|gb|ABG19765.1| hypothetical protein YPN_3438 [Yersinia pestis Nepal516]
 gi|145209353|gb|ABP38760.1| hypothetical protein YPDSF_0341 [Yersinia pestis Pestoides F]
          Length = 314

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 149 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLE 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G+   K  + G L      +A++ Y LT
Sbjct: 209 KVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLT----ALALEDYVLT 251


>gi|312377999|gb|EFR24688.1| hypothetical protein AND_10547 [Anopheles darlingi]
          Length = 549

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 218 IGITIETRPDYCLKRHLSDLLAYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSK 277

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E      +  D L +Y   + +GT  Y++ K 
Sbjct: 278 DAGFKVVSHMMPDLPNVDIERDIEQF-IEFFENPDFRADGLKIYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDL 235
           G       +  VDL
Sbjct: 337 GRYKSYPPSTLVDL 350


>gi|237740087|ref|ZP_04570568.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422104|gb|EEO37151.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 297

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 91/203 (44%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+    ++   R L   R++  IF   G  +L+ P +I 
Sbjct: 31  RCTFCSMYKD-KKFVIKP---IEDIKADIDAFRALYKNRAVEKIFLADGD-ALVVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++++L+
Sbjct: 86  VQVLDYIKEVFPECKRVSIYGTAIAIHQKSVE--DLKKLYEKGLTLVYLGVESGDDEALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + L++ I   +  DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---VVELSKKIM-SVGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            + S+  L + +GT  Y + + G
Sbjct: 200 KYASILNLRLYEGTELYDLMQQG 222


>gi|218782637|ref|YP_002433955.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764021|gb|ACL06487.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 353

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 10/219 (4%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C+        R +    E+        + + R+  GP  IS  F+GG     I
Sbjct: 19  CPHQCVFCNQRAITGAARPFSA--EDARAEVERYLSFPRKSKGPTIIS--FYGGNFLG-I 73

Query: 85  EPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             + I  +LD +A  +     V+ I     P +V   +        V  + LGVQS++E+
Sbjct: 74  SRKRIRDLLD-LASQYVNQGRVDGIRFSTRPDTVSPLSLSLLEGYPVKTVELGVQSMDEE 132

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L    R H   E   A  L R         ++  LP     Q     +   + + D + 
Sbjct: 133 VLEASRRGHTVLEIRTAHELLREKGYETGLQMMIGLPGDDGAQSLASAREIAALSPDFVR 192

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +Y   + + +   +M + G     + + AVDL +   +I
Sbjct: 193 IYPTVVLENSPLAEMWRSGRYEALTLDRAVDLCSKAYAI 231


>gi|51597793|ref|YP_071984.1| hypothetical protein YPTB3501 [Yersinia pseudotuberculosis IP
           32953]
 gi|153949697|ref|YP_001399461.1| radical SAM family protein [Yersinia pseudotuberculosis IP 31758]
 gi|153997331|ref|ZP_02022431.1| hypothetical protein YPE_3778 [Yersinia pestis CA88-4125]
 gi|165928099|ref|ZP_02223931.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937398|ref|ZP_02225961.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011299|ref|ZP_02232197.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167420787|ref|ZP_02312540.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426995|ref|ZP_02318748.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218930568|ref|YP_002348443.1| hypothetical protein YPO3556 [Yersinia pestis CO92]
 gi|229837085|ref|ZP_04457250.1| predicted Fe-S oxidoreductase [Yersinia pestis Pestoides A]
 gi|229839212|ref|ZP_04459371.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229899776|ref|ZP_04514917.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229904092|ref|ZP_04519203.1| predicted Fe-S oxidoreductase [Yersinia pestis Nepal516]
 gi|294505321|ref|YP_003569383.1| hypothetical protein YPZ3_3212 [Yersinia pestis Z176003]
 gi|51591075|emb|CAH22739.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349179|emb|CAL22144.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288968|gb|EDM39048.1| hypothetical protein YPE_3778 [Yersinia pestis CA88-4125]
 gi|152961192|gb|ABS48653.1| radical SAM protein, TIGR01212 family [Yersinia pseudotuberculosis
           IP 31758]
 gi|165914503|gb|EDR33117.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919873|gb|EDR37174.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989683|gb|EDR41984.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166961593|gb|EDR57614.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167054035|gb|EDR63863.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229678210|gb|EEO74315.1| predicted Fe-S oxidoreductase [Yersinia pestis Nepal516]
 gi|229687268|gb|EEO79343.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695578|gb|EEO85625.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706028|gb|EEO92037.1| predicted Fe-S oxidoreductase [Yersinia pestis Pestoides A]
 gi|294355780|gb|ADE66121.1| hypothetical protein YPZ3_3212 [Yersinia pestis Z176003]
 gi|320017098|gb|ADW00670.1| putative Fe-S oxidoreductase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 307

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + ++  VD + L+ L I +G+   K  + G L      +A++ Y LT
Sbjct: 202 KVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLT----ALALEDYVLT 244


>gi|157113367|ref|XP_001657798.1| elongator component, putative [Aedes aegypti]
 gi|108877788|gb|EAT42013.1| elongator component, putative [Aedes aegypti]
          Length = 549

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 218 IGITIETRPDYCLKRHLSDLLAYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSK 277

Query: 166 N----IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +    +   M  DL     ++ + Q+ +E      +  D L +Y   + +GT  Y++ K 
Sbjct: 278 DAGFKVVSHMMPDLPNVDIERDIEQF-IEFFENPDFRADGLKIYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDL 235
           G       +  VDL
Sbjct: 337 GRYKSYPPSTLVDL 350


>gi|294785088|ref|ZP_06750376.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294486802|gb|EFG34164.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 297

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+   +++   R L   R++  IF   G  +L+ P +I 
Sbjct: 31  RCSFCSMYKD-KKFVIKP---IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALVVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++++L+
Sbjct: 86  IQVLDYIREVFPECKRVSIYGTAIAIHQKSVE--DLKKLYEKGLTLVYLGVESGDDEALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + L++ I      DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---IVELSKKIM-STGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            + S+  L + +GT  Y + ++G
Sbjct: 200 KYASILNLRLYEGTELYNLMQEG 222


>gi|325282226|ref|YP_004254768.1| hypothetical protein Odosp_3643 [Odoribacter splanchnicus DSM
           20712]
 gi|324314035|gb|ADY34588.1| Conserved hypothetical protein CHP01212 [Odoribacter splanchnicus
           DSM 20712]
          Length = 315

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 128 AGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           AG++R     +  GV+S  ++ LR + R H  +EA  AI        R+   LI+ LP +
Sbjct: 138 AGLSRRCYVCVEYGVESANDEVLRTVNRGHTFAEAEEAIRKTAERGIRIGAHLIFGLPGE 197

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           +         R     +  L L+QL I +GT
Sbjct: 198 SRESMLEGAVRVCDLPIQVLKLHQLQIVRGT 228


>gi|304440215|ref|ZP_07400105.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371264|gb|EFM24880.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 340

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/202 (19%), Positives = 87/202 (43%), Gaps = 14/202 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIF 75
           N + +++    C   C +C+ N  +    +  +  +++ + E + + R+     SI  + 
Sbjct: 4   NIIPIFIPHLGCPHDCVFCNQNK-IASTSIATKKTVKNTIDEYLDYFRK----DSIVEVA 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GG+ + I  ++    L  +A  +   + V  I +   P  ++ N  +  +  GV+ + 
Sbjct: 59  FYGGSFTAIPIEDQINFL-SVANEYKKKNLVSFIRLSTRPDYIDENILEILKSNGVDTVE 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS  +  L   GR H+      ++ + +     +    +  LP    +  E+E+Q A
Sbjct: 118 LGVQSSNQNVLNKSGRGHDFDCVKKSVKMLKKYGFNVGLQQMVGLP---YSNDELEMQTA 174

Query: 195 LSY---AVDHLSLYQLTIEKGT 213
           + +     D + +Y   + K T
Sbjct: 175 MDFMNLKPDFVRIYPTLVVKDT 196


>gi|238764255|ref|ZP_04625207.1| hypothetical protein ykris0001_25200 [Yersinia kristensenii ATCC
           33638]
 gi|238697536|gb|EEP90301.1| hypothetical protein ykris0001_25200 [Yersinia kristensenii ATCC
           33638]
          Length = 300

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 142 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGENQAQCMETLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +  +  VD + L+ L I +G++  K  + G L      +A++ Y LT
Sbjct: 202 KVAASGVDGIKLHPLHIVEGSIMAKAWRAGRL----PELALEEYVLT 244


>gi|254429447|ref|ZP_05043154.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
 gi|196195616|gb|EDX90575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
          Length = 445

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 32/223 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSIS----------SIF 75
           C K C +C     V  Y  G+E    +Q  L+E+Q +  + G R ++           + 
Sbjct: 157 CSKYCTFC-----VVPYTRGEEVSRPVQPVLSEIQHLADM-GVREVNLLGQNVNAYQGVG 210

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             G T  L +   +   +DGI +  +T S  VE       S   +  ++   +  V+ + 
Sbjct: 211 ADGDTLDLADLIRLIRDIDGIDRIRYTTSHPVEF------SDALIQVYEDVPEL-VSHLH 263

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE--ME 190
           L VQS  ++ L  + RNH   E  + +   + I P +SF  D I   P +T   +E  M+
Sbjct: 264 LPVQSGSDRILAMMKRNHMVLEYKSKLRKLKRIRPDISFSSDFIIGFPGETDRDFEDTMD 323

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           L   + + +    +Y  +   GT    +  D D+ +  + +A+
Sbjct: 324 LIHDIGFDMSFSFIY--SARPGTPAADLPDDVDMDVKKQRLAI 364


>gi|303228990|ref|ZP_07315800.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516404|gb|EFL58336.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 325

 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+Q++   +L  + R H+ ++ I A+   +     ++  +I  LP  TM    +E  
Sbjct: 149 IELGLQTVNYHTLEKINRGHDLAQFIDAVLRIKRYGFNVTTHMIVNLPWDTMED-TIEGA 207

Query: 193 RAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           + L S  VD + L+ L I K TL  K +++G + L S
Sbjct: 208 KILSSLGVDQVKLHALYIVKHTLMAKWYEEGQITLIS 244


>gi|297795799|ref|XP_002865784.1| hypothetical protein ARALYDRAFT_495092 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311619|gb|EFH42043.1| hypothetical protein ARALYDRAFT_495092 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 565

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +     
Sbjct: 229 SATKCIGMTIETRPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADC 288

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
             LA++   ++   ++  LP    ++ M  ++ E   + S+  D L +Y   + +GT  Y
Sbjct: 289 FCLAKDAGFKVVAHMMPDLPNVGVERDMESFK-EFFESPSFRADGLKIYPTLVIRGTGLY 347

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 348 ELWKTG 353


>gi|258514850|ref|YP_003191072.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257778555|gb|ACV62449.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 488

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/194 (19%), Positives = 80/194 (41%), Gaps = 5/194 (2%)

Query: 30  KKCPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           + C Y CD+ +    Y  G       ++ E  W++Q+     ++ I+F      + E ++
Sbjct: 207 RGCNYRCDYCAESLTYGRGVRFHSPDYVIE--WIKQVRKDYRVNGIYFHDNDFLIYENRS 264

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +    I+    +S  ++  I+   + ++ +  +  ++AG   + +GV++  ++ L  +
Sbjct: 265 REICERIISAG--LSGKIKWAIQTRVNRLKPDMIKLLKRAGCILVEVGVEAASQRELDLV 322

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            +         AI L RN    +   ++ AL  + +   E  +Q            + L 
Sbjct: 323 NKQTTVYANEQAIALCRNEGISIHAYMLTALEGEIIKDLEQRIQWVKRVKPSTFDWHPLK 382

Query: 209 IEKGTLFYKMHKDG 222
           I  GTL Y+   DG
Sbjct: 383 IHPGTLLYQKKGDG 396


>gi|255540377|ref|XP_002511253.1| Elongator complex protein, putative [Ricinus communis]
 gi|223550368|gb|EEF51855.1| Elongator complex protein, putative [Ricinus communis]
          Length = 563

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 232 IGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAK 291

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP     + +ME  R      S+  D L +Y   + +GT  Y++ K 
Sbjct: 292 DAGFKVVAHMMPDLP-NVGVERDMESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKT 350

Query: 222 G 222
           G
Sbjct: 351 G 351


>gi|260494305|ref|ZP_05814436.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|260198451|gb|EEW95967.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_33]
          Length = 297

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+   +++   R L   R++  IF   G  +L+ P +I 
Sbjct: 31  RCTFCSMYKD-KKFIIKP---IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALVVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++++L+
Sbjct: 86  IQVLDYIKEVFPECKRVSIYGTAIAIHQKSVE--DLRKLYEKGLTLVYLGVESGDDEALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + L++ I      DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---IVELSKKIM-STGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            + S+  L + +GT  Y + ++G
Sbjct: 200 KYASILNLRLYEGTELYNLMQEG 222


>gi|169831317|ref|YP_001717299.1| putative radical SAM protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638161|gb|ACA59667.1| conserved hypothetical radical SAM protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 307

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+  ++L  + R H A + + A+  AR     +   +I  LP +T     +E  
Sbjct: 144 LEYGLQSIHNRTLERINRGHTAGQFLDAVARARGRGIFVCAHVILGLPGETPED-TVETA 202

Query: 193 RALSYA-VDHLSLYQLTIEKGTLFYKMHKDG--DLVLPSENV--AVD-LYNLTQSIT 243
           RAL+ A VD + ++ L + +GT      + G  D++ P+E V  A D L +L   IT
Sbjct: 203 RALTQAGVDGVKVHHLQVIRGTPLEAEWRSGRVDVLSPAEYVRWAADFLEHLDAGIT 259


>gi|162421099|ref|YP_001605673.1| radical SAM family protein [Yersinia pestis Angola]
 gi|162353914|gb|ABX87862.1| radical SAM protein, TIGR01212 family [Yersinia pestis Angola]
          Length = 327

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 45/93 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L+ + R H+ +        AR    ++   LI  LP +   Q    L+
Sbjct: 164 LELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLE 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           + ++  VD + L+ L I +G+   K  + G L 
Sbjct: 224 KVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLT 256


>gi|311280443|ref|YP_003942674.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           SCF1]
 gi|308749638|gb|ADO49390.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           SCF1]
          Length = 474

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEIT---IEANPSSVEVNNFQGYRKAGVN 131
           + G T S  +   +   +DGI +  +T S  +E T   IE    + E+ +F         
Sbjct: 211 YDGTTGSFADLLRLVAAIDGIDRVRFTTSHPIEFTDDIIEVYRDTPELVSF--------- 261

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            + L VQS  ++ L  +GR H A E  A I   R   P  ++S D I   P +T   +E 
Sbjct: 262 -LHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTDDFER 320

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            ++       D    +  +   GT    M  D
Sbjct: 321 TMKLIADVNFDMSYSFIFSARPGTPAADMVDD 352


>gi|254507472|ref|ZP_05119606.1| radical SAM protein [Vibrio parahaemolyticus 16]
 gi|219549542|gb|EED26533.1| radical SAM protein [Vibrio parahaemolyticus 16]
          Length = 314

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L 
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESREDNISTLD 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAV 233
           + L    D + L+ L I +G+   K  K G L  P   E VA+
Sbjct: 202 KVLQVGTDGIKLHGLHIVEGSTMAKAWKAGRLQAPELDEYVAI 244


>gi|190893801|ref|YP_001980343.1| methylase (RNA modification enzyme), MiaB family [Rhizobium etli
           CIAT 652]
 gi|190699080|gb|ACE93165.1| putative methylase protein (RNA modification enzyme), MiaB family
           [Rhizobium etli CIAT 652]
          Length = 423

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q  ++  L+ + R H  ++A+  I  AR + P MSF  D+I   P +T   ++  
Sbjct: 251 LHLSLQHGDDMILKRMKRRHLRADALRFIAEARRLRPEMSFGADMIAGFPTETEEMFDNA 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++ A    + HL ++  +   GT   +M
Sbjct: 311 VRLAEEAGIAHLHVFPYSARPGTPAARM 338


>gi|320352216|ref|YP_004193555.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320120718|gb|ADW16264.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 335

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 47/116 (40%)

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           EI +   P  ++        + GV+ + LG QS +++ LR  GR H  +    A    R 
Sbjct: 93  EIRLSTRPDLIDSGRLDLLEEYGVSIVELGAQSCDDRVLRLAGRGHGGAAVEDAARQLRE 152

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               +   L+  LP  +       +   +S     + LY + + +G+   +++  G
Sbjct: 153 RGFGLGIQLMLGLPGDSFRILRQTVATVVSLRPAFVRLYPVLVVRGSGLERLYHRG 208


>gi|294461454|gb|ADE76288.1| unknown [Picea sitchensis]
          Length = 574

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +     
Sbjct: 238 SATKCIGLTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADC 297

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFY 216
             LA++   ++   ++  LP     + +ME  R      ++  D L +Y   + +GT  Y
Sbjct: 298 FCLAKDAGFKVVAHMMPDLP-NVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLY 356

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 357 ELWKTG 362


>gi|237744101|ref|ZP_04574582.1| oxygen-independent coproporphyrinogen III [Fusobacterium sp. 7_1]
 gi|229431330|gb|EEO41542.1| oxygen-independent coproporphyrinogen III [Fusobacterium sp. 7_1]
          Length = 297

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C      +++ +     I+   +++   R L   R++  IF   G  +L+ P +I 
Sbjct: 31  RCTFCSMYKD-KKFIIKP---IEDIKSDIDAFRALYKNRAVEKIFLADGD-ALVVPTDIL 85

Query: 91  L-ILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +LD I + +     V I    I  +  SVE  + +   + G+  + LGV+S ++++L+
Sbjct: 86  IQVLDYIKEVFPECKRVSIYGTAIAIHQKSVE--DLRKLYEKGLTLVYLGVESGDDEALK 143

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------V 199
           F+ +   A +    + L++ I      DL   L    + +++     A++ A        
Sbjct: 144 FIKKGIKAEK---IVELSKKIM-STGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            + S+  L + +GT  Y + ++G
Sbjct: 200 KYASILNLRLYEGTELYNLMQEG 222


>gi|239618120|ref|YP_002941442.1| hypothetical protein Kole_1752 [Kosmotoga olearia TBF 19.5.1]
 gi|239506951|gb|ACR80438.1| conserved hypothetical protein [Kosmotoga olearia TBF 19.5.1]
          Length = 305

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+Q+    +L+ L R H  +E I A+  A+     +   +I  LP  TMT   +E  
Sbjct: 141 IEFGLQTANFWTLKKLNRGHTLAEFIDAVIRAKKHGLEVVAHVIVNLPWDTMTDV-IETA 199

Query: 193 RALS-YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + LS  +VD + ++ L + +GT   KM+K G
Sbjct: 200 KILSALSVDGVKIHSLYVVEGTALGKMYKKG 230


>gi|313674926|ref|YP_004052922.1| hypothetical protein Ftrac_0812 [Marivirga tractuosa DSM 4126]
 gi|312941624|gb|ADR20814.1| hypothetical protein Ftrac_0812 [Marivirga tractuosa DSM 4126]
          Length = 1366

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           ++K   N   + V +LE + + +L    +    +  +++ +   PR+    +    KQ  
Sbjct: 259 FQKENQNVYDIDVPTLELKGINYLKAYEDNFLVVNQVNIPK---PRIKIQSVLKSNKQNT 315

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------ 238
            Q E  +  +L    D + +    I +G L   +  D      S+N+++DL+N+      
Sbjct: 316 EQAENSIGASLLALFDLIKIKDFKIHEGGLNLTLKGDNQQRFLSDNISIDLFNIELDSTQ 375

Query: 239 --TQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
              Q+I       + EI+++ +L  ++LH + +
Sbjct: 376 RDIQNIIHYFQHASVEINDYDYLLPDNLHTIKF 408


>gi|317472786|ref|ZP_07932097.1| TIGR01212 family radical SAM protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899705|gb|EFV21708.1| TIGR01212 family radical SAM protein [Anaerostipes sp. 3_2_56FAA]
          Length = 241

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 9/131 (6%)

Query: 106 VEITIEANPSSVE------VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           V I++   P  +       +N  Q  R A V  I  G+Q++   +L+ + R H  +E + 
Sbjct: 37  VGISLSTRPDCIRKDYLEFLNEIQQERGAAVT-IEFGLQTVNYHTLKKMNRGHTLAEYLN 95

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKM 218
           A+ L       +   +I  LP  T+    +E  R +S   V  +  + L I K ++ Y+ 
Sbjct: 96  AVLLTAPFGFEICTHVILNLPGDTVED-AVETARVISALPVSVVKAHSLYIPKNSVLYEE 154

Query: 219 HKDGDLVLPSE 229
           ++DG + L ++
Sbjct: 155 YRDGKISLCTK 165


>gi|307353916|ref|YP_003894967.1| histone acetyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307157149|gb|ADN36529.1| histone acetyltransferase, ELP3 family [Methanoplanus petrolearius
           DSM 11571]
          Length = 541

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 3/139 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +  T E  P      +       GV ++ LGVQ +E + L +  R H       A  L R
Sbjct: 220 IAATFETRPDWCMKEHIDDMLALGVTKVELGVQQIENRILEYNRRGHGVEATEEANRLLR 279

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ F ++  LP  T+   +       +   +  D L +Y   +  G+   ++ + G
Sbjct: 280 DAGLKVGFHVMPNLPSATIEDDKKMFDLLFTDERFCPDFLKIYPTLVTPGSEIEELWRSG 339

Query: 223 DLVLPSENVAVDLYNLTQS 241
              +  E+  +DL    +S
Sbjct: 340 QYDVYDEDDLIDLVAYGKS 358


>gi|170036115|ref|XP_001845911.1| elongator component [Culex quinquefasciatus]
 gi|167878602|gb|EDS41985.1| elongator component [Culex quinquefasciatus]
          Length = 446

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  +++
Sbjct: 116 IGITIETRPDYCLNRHLSDLLAYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSK 175

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E      +  D L +Y   + +GT  Y++ K 
Sbjct: 176 DAGFKVVSHMMPDLPNVDIERDVEQF-IEFFENPDFRADGLKIYPTLVIRGTGLYELWKT 234

Query: 222 GDLVLPSENVAVDL 235
           G       +  VDL
Sbjct: 235 GRYKSYPPSTLVDL 248


>gi|146313289|ref|YP_001178363.1| putative radical SAM protein [Enterobacter sp. 638]
 gi|145320165|gb|ABP62312.1| conserved hypothetical radical SAM protein [Enterobacter sp. 638]
          Length = 328

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +        L+
Sbjct: 156 LELGLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQQHGLETLE 215

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + +   VD + L+ L I KG+   K  + G L      + +D Y +T
Sbjct: 216 KVIETGVDGIKLHPLHIVKGSTMAKSWEAGRL----NGIELDEYTVT 258


>gi|315636581|ref|ZP_07891815.1| radical SAM superfamily protein [Arcobacter butzleri JV22]
 gi|315479090|gb|EFU69789.1| radical SAM superfamily protein [Arcobacter butzleri JV22]
          Length = 320

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 43/102 (42%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS  +++L  + R    S     I   ++   ++   LIY LP +T        +
Sbjct: 165 IEYGIQSFFDETLVKINRGDTVSNMKYWIKRTKDRGLKVCGHLIYGLPNETQEMMLETFK 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + L   VD +  + L + K TL     K G     SE + +D
Sbjct: 225 QTLELEVDSIKFHPLYVVKNTLLTNDFKKGRFTPISEELYID 266


>gi|253743952|gb|EET00225.1| Histone acetyltransferase Elp3 [Giardia intestinalis ATCC 50581]
          Length = 579

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)

Query: 65  LTGPRS-----ISSIFFG------GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           L+ PRS     IS I+ G       G    I P++I+       K       V +TIE  
Sbjct: 166 LSTPRSYRDSFISGIYTGLTGHIPAGPKRNIVPESISYAARSSIKC------VALTIETR 219

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P   E  +     + G  R+ +GVQS+ +     + R H     I     +++   +M  
Sbjct: 220 PDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQSKDAGFKMIA 279

Query: 174 DLIYALPKQTMTQWEM----ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            ++  LP  T T  ++    EL ++ +Y  D L +Y   I +GT  Y+
Sbjct: 280 HMMPNLPF-TSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYE 326


>gi|74318205|ref|YP_315945.1| hypothetical protein Tbd_2187 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057700|gb|AAZ98140.1| Conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 316

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  + +L  + R H  +E   A   AR +   +   LI  LP +  +   + L 
Sbjct: 146 LELGLQSSFDATLARVNRGHGFAEYRTATRAARALGIPVCCHLIVGLPGEDESHSHVSLD 205

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
           R L   VD L L+ L + K T
Sbjct: 206 RVLDIGVDGLKLHPLHVVKHT 226


>gi|52857642|gb|AAU89074.1| histone acetyltransferase Elp3 [Giardia intestinalis]
          Length = 454

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)

Query: 65  LTGPRS-----ISSIFFG------GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           L+ PRS     IS I+ G       G    I P++I+       K       V +TIE  
Sbjct: 41  LSTPRSYRDSFISGIYTGLTGHIPAGPKRNIVPESISYAARSSIKC------VALTIETR 94

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P   E  +     + G  R+ +GVQS+ +     + R H     I     +++   +M  
Sbjct: 95  PDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQSKDAGFKMIA 154

Query: 174 DLIYALPKQTMTQWEM----ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            ++  LP  T T  ++    EL ++ +Y  D L +Y   I +GT  Y+
Sbjct: 155 HMMPNLPF-TSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYE 201


>gi|255526258|ref|ZP_05393175.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296186252|ref|ZP_06854656.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255510038|gb|EET86361.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296049053|gb|EFG88483.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 289

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/237 (19%), Positives = 103/237 (43%), Gaps = 27/237 (11%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C      +++K+     ++    ++   R+L    ++  IF   G   +++ + + 
Sbjct: 29  KCSFCSMYKD-KKFKIRS---LEEVYKDLHEARKLYS--NVERIFLADGDSLVLKTEMLE 82

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IL  I + +     V  +  A P  +     N  +  +K G+  + +G++S +++ L+ 
Sbjct: 83  KILLKIKELYPECKRV--SAYAAPKDILRKSENELENLKKLGLKMLYMGIESGDDEILQK 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-------VD 200
           + +   + E I A    +N+  ++S  LI  +  +   +W+   + AL  A        D
Sbjct: 141 ICKGVTSGEIIEAGKKVKNVGIKLSVTLISGIGGK--YKWK---KNALGSAKIITSIDPD 195

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++ +  L +E GT  Y+    GD  +L  + + ++     +SI   + +     SNH
Sbjct: 196 YVGILTLLVEPGTKMYEEVNSGDFELLNPKEIMLETLEFIKSINVTNCIFR---SNH 249


>gi|269792733|ref|YP_003317637.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100368|gb|ACZ19355.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 433

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 2/101 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I+L VQS  ++ L+ +GR +   E ++ + L R+  P +    DLI   P +T   +E  
Sbjct: 256 INLPVQSGSDRVLKLMGRGYTRDEYLSMVALLRDNLPEVGITSDLIVGFPGETPEDFEKS 315

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           L        D +     ++  GT   +M    D+   +E +
Sbjct: 316 LSLLEEVRFDLVHTAAYSVRPGTRAERMEGHLDVSTKAERL 356


>gi|159117819|ref|XP_001709129.1| Histone acetyltransferase Elp3 [Giardia lamblia ATCC 50803]
 gi|157437244|gb|EDO81455.1| Histone acetyltransferase Elp3 [Giardia lamblia ATCC 50803]
          Length = 588

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)

Query: 65  LTGPRS-----ISSIFFG------GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           L+ PRS     IS I+ G       G    I P++I+       K       V +TIE  
Sbjct: 175 LSTPRSYRDSFISGIYTGLTGHIPAGPKRNIVPESISYAARSSIKC------VALTIETR 228

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P   E  +     + G  R+ +GVQS+ +     + R H     I     +++   +M  
Sbjct: 229 PDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQSKDAGFKMIA 288

Query: 174 DLIYALPKQTMTQWEM----ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            ++  LP  T T  ++    EL ++ +Y  D L +Y   I +GT  Y+
Sbjct: 289 HMMPNLPF-TSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYE 335


>gi|153834481|ref|ZP_01987148.1| radical SAM protein, family [Vibrio harveyi HY01]
 gi|148869117|gb|EDL68153.1| radical SAM protein, family [Vibrio harveyi HY01]
          Length = 314

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +   +   LI  LPK+T       L+
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITKRARALGINVCTHLIVGLPKETRDDNIETLR 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAV 233
           + L    D + L+ L I +G+   K  + G L  P   E VA+
Sbjct: 202 KVLEVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEYVAI 244


>gi|147678318|ref|YP_001212533.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI]
 gi|146274415|dbj|BAF60164.1| predicted Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI]
          Length = 324

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 16/135 (11%)

Query: 106 VEITIEANPSSVE------VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           V I++   P  V       ++ F+  +K  VN I LG+Q++   +L  + R H  +E I 
Sbjct: 114 VGISVSTRPDCVNDRYLDFLSWFKEEQKLDVN-IELGLQTVNYHTLEKVNRGHTLAEFID 172

Query: 160 AIHLARNIFPRMSFD----LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           A+   +    R  FD    LI  LP   M       +   +  ++++ L+ L + +GT+ 
Sbjct: 173 AVLRVK----RYGFDTCVHLILNLPWDNMDDVVENAKVLSALGIEYVKLHSLYVVRGTVL 228

Query: 216 YKMHKDGDL-VLPSE 229
             M++ G+  ++P E
Sbjct: 229 GDMYERGEFEIIPME 243


>gi|117621140|ref|YP_857210.1| radical SAM protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562547|gb|ABK39495.1| radical SAM protein, family [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 311

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 4/132 (3%)

Query: 101 TVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASE 156
           +VS  V + +   P  V    ++   GY+  G    + LG+QS  +++L+ + R H  + 
Sbjct: 106 SVSDMVGLCVGTRPDCVPDAVLDLLAGYQARGYEVWLELGLQSANDKTLQRINRGHGYAA 165

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
              A+  A     ++   LI  LP +        LQR +   V+ + L+ L + +G+   
Sbjct: 166 YADAVARAHQRGIKVCAHLIVGLPGEVAMDSLNTLQRIVETGVEGIKLHPLHVVEGSTLG 225

Query: 217 KMHKDGDLVLPS 228
           K  + G L +PS
Sbjct: 226 KAWQAGRLEVPS 237


>gi|224373544|ref|YP_002607916.1| radical SAM protein, family [Nautilia profundicola AmH]
 gi|223589646|gb|ACM93382.1| radical SAM protein, family [Nautilia profundicola AmH]
          Length = 313

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/102 (18%), Positives = 46/102 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS  +++L+ + R H+ +     +   +++   +   LI+ LP +T       ++
Sbjct: 160 VEYGIQSSNDETLKKINRGHDFANVKEVVKKTKDLNLNVCGHLIFGLPGETQEDMLKSVK 219

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             +   +D +  + L + + TL    +K G+     E   +D
Sbjct: 220 DTIELNIDSIKFHPLYVTENTLLALEYKKGNFTPIDEQTYID 261


>gi|16082300|ref|NP_394766.1| acetyltransferase [Thermoplasma acidophilum DSM 1728]
 gi|10640654|emb|CAC12432.1| probable Histone and other Protein Acetyltransferase (yeast HPA1)
           [Thermoplasma acidophilum]
          Length = 515

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 15/139 (10%)

Query: 106 VEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + +T+E  P      E++    Y   G  ++ LGVQ+++++ L    R H  ++   +  
Sbjct: 190 IGLTVETKPDWFFEREIDEALAY---GTTKVELGVQNIDDRILAINNRGHTVADIARSTQ 246

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFY 216
           LAR+   ++ +   + +P    + +E +L+          +  D L +Y   + +GT  Y
Sbjct: 247 LARDAGLKIVY---HIMPGMYGSSFEKDLKSFDLMINDERFKPDMLKIYPTLVTQGTGLY 303

Query: 217 KMHKDGDLVLPSENVAVDL 235
            + K+G     +    VDL
Sbjct: 304 NLWKNGKYRPYTTAETVDL 322


>gi|167751473|ref|ZP_02423600.1| hypothetical protein EUBSIR_02469 [Eubacterium siraeum DSM 15702]
 gi|167655281|gb|EDR99410.1| hypothetical protein EUBSIR_02469 [Eubacterium siraeum DSM 15702]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 6/209 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++ V++    C   C +C+  +     +   E  ++S L E Q +  L    + + I F
Sbjct: 4   TNISVFIPHYGCTHICSFCNQKTISGHSEPVTEKELESIL-EGQ-LENLKDSGTKAQIAF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRI 133
            GG+ + I+   +  +L  +AK +T +   +   I     P  ++       +  G+  I
Sbjct: 62  FGGSFTAIDRDYMIRLLT-VAKRYTDAYPEQYDGIRCSTRPDCIDEEILGILKSYGMTAI 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG QS+ ++ L    R H A +   A  L +     +   ++  L K T        + 
Sbjct: 121 ELGAQSMNDEVLTANRRGHTAQDVRRASRLIKQSGFELGLQMMTGLYKDTEQYCIDTAKE 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            ++   D + +Y   I K T   ++H+ G
Sbjct: 181 FIALHCDTVRIYPTVILKNTELGRLHESG 209


>gi|254173136|ref|ZP_04879809.1| elongator complex protein 3 [Thermococcus sp. AM4]
 gi|214032545|gb|EEB73374.1| elongator complex protein 3 [Thermococcus sp. AM4]
          Length = 590

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 94/244 (38%), Gaps = 14/244 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++         R H   E + A  L R
Sbjct: 238 VGLTIETRPDWAFERQIDRMLHFGTTRVELGVQTVFNFIHERTKRGHGVEEIVKATQLLR 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++++ ++  LP     + ++   R +     +  D L +Y   + K    Y+  K+
Sbjct: 298 DAGLKINYHIMPGLPGSNFER-DLYTFRTIFEDSRFRPDMLKVYPTLVTKDAPLYRWWKE 356

Query: 222 GDLVLPSENVAVDL----YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI- 276
           G         AVDL    Y L         +   +I     +      NL    + + I 
Sbjct: 357 GKYRPYRTEEAVDLLVEAYKLFPKWVRVMRIQR-DIPVQLIVDGVKHSNLGQLVFNELIK 415

Query: 277 -GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            GI P      +VG       I+   E  +K++R++  A   +E FLS E   ++ L+  
Sbjct: 416 RGIRPREIRFREVGHMMEKFGIQPEVEH-IKLLREDYEASGGREIFLSFEDTKNDILIGF 474

Query: 335 LRLR 338
           LRLR
Sbjct: 475 LRLR 478


>gi|159130340|gb|EDP55453.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
           fumigatus A1163]
          Length = 1374

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +AIA I    +  P     LI A P   M QW+ E+Q+A+      LS+Y L  +K  + 
Sbjct: 576 QAIALIVSRPSTDPERKPTLIVA-PVSLMQQWKREIQKAVKPGRHQLSVYVLHGDKRAVS 634

Query: 216 YKMHKDGDLVL 226
           Y+  KD D+VL
Sbjct: 635 YRDMKDYDVVL 645


>gi|70992713|ref|XP_751205.1| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus fumigatus
           Af293]
 gi|66848838|gb|EAL89167.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus
           fumigatus Af293]
          Length = 1376

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +AIA I    +  P     LI A P   M QW+ E+Q+A+      LS+Y L  +K  + 
Sbjct: 576 QAIALIVSRPSTDPERKPTLIVA-PVSLMQQWKREIQKAVKPGRHQLSVYVLHGDKRAVS 634

Query: 216 YKMHKDGDLVL 226
           Y+  KD D+VL
Sbjct: 635 YRDMKDYDVVL 645


>gi|302404972|ref|XP_003000323.1| elongator complex protein [Verticillium albo-atrum VaMs.102]
 gi|261360980|gb|EEY23408.1| elongator complex protein [Verticillium albo-atrum VaMs.102]
          Length = 573

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +        ++
Sbjct: 231 VGITIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCYSK 290

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +      ++  D L +Y   + +GT  Y++ + G
Sbjct: 291 DAGYKVVSHMMPDLPNCGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 350

Query: 223 DLVLPSENVAVDL 235
                + N  +DL
Sbjct: 351 RYQNYTPNELIDL 363


>gi|2623056|gb|AAC46004.1| anaerobic coproporphyrinogen III oxidase [Rhodobacter capsulatus]
          Length = 141

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFF 76
           S+ +Y+H PFC + C +C   +   +     + + ++ + E+  ++    P   +S + +
Sbjct: 50  SISLYMHVPFCRRLCWFCACRTQGTQTDAPVKTYAETLIKEVAMLKSHLAPGVKLSRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
           GGGT +L+   ++  I + + +   +  N E 
Sbjct: 110 GGGTATLLPADSMRKIAEAVFEAVPLGENGEF 141


>gi|15897406|ref|NP_342011.1| histone acethyltransferase, putative [Sulfolobus solfataricus P2]
 gi|227830614|ref|YP_002832394.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.S.2.15]
 gi|229579497|ref|YP_002837895.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.G.57.14]
 gi|284998141|ref|YP_003419908.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.D.8.5]
 gi|13813635|gb|AAK40801.1| Histone acethyltransferase, putative [Sulfolobus solfataricus P2]
 gi|227457062|gb|ACP35749.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.S.2.15]
 gi|228010211|gb|ACP45973.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.G.57.14]
 gi|284446036|gb|ADB87538.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.D.8.5]
          Length = 473

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           PS  +P  + L  D   KN       V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 116 PSYDKPSFVYL-EDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPK 216


>gi|307243410|ref|ZP_07525567.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306493220|gb|EFM65216.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 299

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 11/132 (8%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C    +   +K+     I+S + E     Q    RS   +F   G P +++ + + 
Sbjct: 29  KCKFCGMYRYTN-FKMESLEQIESDVIEAS---QHPFYRSTKRVFLLNGNPFVLKAERLL 84

Query: 91  LILDGIAKNWTVSSNVE-ITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            I + I K      NVE IT  A+   +E    +  +  ++AG+N + +GV+S  +++L 
Sbjct: 85  KIAEIIHKYL---KNVEVITTYASIKDIENKTDDELRQLKEAGINDLYIGVESGNQEALE 141

Query: 147 FLGRNHNASEAI 158
           F+ + +   EAI
Sbjct: 142 FINKGNTVDEAI 153


>gi|291530280|emb|CBK95865.1| Histone acetyltransferase [Eubacterium siraeum 70/3]
          Length = 330

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 6/209 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++ V++    C   C +C+  +     +   E  ++S L E Q +  L    + + I F
Sbjct: 4   TNISVFIPHYGCTHICSFCNQKTISGHSEPVTEKELESIL-EGQ-LENLKDSGTKAQIAF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNRI 133
            GG+ + I+   +  +L  +AK +T +   +   I     P  ++       +  G+  I
Sbjct: 62  FGGSFTAIDRDYMIRLLT-VAKRYTDAYPEQYDGIRCSTRPDCIDEEILGILKSYGMTAI 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG QS+ ++ L    R H A +   A  L +     +   ++  L K T        + 
Sbjct: 121 ELGAQSMNDEVLTANRRGHTAQDVRRASRLIKQSGFELGLQMMTGLYKDTEQYCIDTAKE 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            ++   D + +Y   I K T   ++H+ G
Sbjct: 181 FIALHCDTVRIYPTVILKNTELGRLHESG 209


>gi|70606824|ref|YP_255694.1| hypothetical protein Saci_1044 [Sulfolobus acidocaldarius DSM 639]
 gi|68567472|gb|AAY80401.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 456

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQ 138
           PS  +P  I L+ D   +N T S   V +T+E  P  S EV+  Q  R  GV ++ LGVQ
Sbjct: 107 PSNQKPGFI-LLEDAQLRNETASIRCVGLTVETKPDWSKEVHAKQMLR-LGVTKVELGVQ 164

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-- 196
           ++ +  L    R H   ++I A  + ++   ++ + ++  LP     +     +R  S  
Sbjct: 165 TVFDDLLTKSNRGHTVKDSIEATKILKDNGFKVVYHMMLGLPGSDPDKDLESFERIFSDP 224

Query: 197 -YAVDHLSLYQ-LTIEKGTL 214
            ++ D L +Y  L +E   L
Sbjct: 225 DFSPDMLKIYPTLVVETAPL 244


>gi|331091123|ref|ZP_08339965.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405345|gb|EGG84881.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 314

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQSLRFLGRNHNAS 155
           ++   VEI+I   P  V  +  Q  +           + LG+Q++   +L F+ R H  +
Sbjct: 107 SIPDIVEISISTRPDCVREDYLQFLKVIEKTYHISIHLELGLQTVNYHTLDFISRGHGLA 166

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTL 214
           E I A+   +     +   LI  LP  T+    +E  + +S   +D + L+ L I K T 
Sbjct: 167 EYIDAVRRIQKYGFSICTHLILNLPHDTLRD-TIETAKTMSALEIDIVKLHSLYIPKNTP 225

Query: 215 FYKMHKDGDLVLPSENVAVD 234
             + ++ G + L S+   ++
Sbjct: 226 LCEAYEHGTINLCSKEEYIE 245


>gi|290559091|gb|EFD92461.1| histone acetyltransferase, ELP3 family [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
 gi|326422585|gb|EGD71979.1| Histone acetyltransferase, ELP3 family [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 525

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V    E  P      + +     G+ R+ +GVQS+ ++ L    R H   + I +    +
Sbjct: 206 VAFAAETKPERCSNEDIERMLNFGITRVEMGVQSVYDEVLLRNNRGHTIHDVIDSTRRLK 265

Query: 166 NIFPRMSFDLIYALP-------KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           N   ++   ++  LP       K+T+ Q    +     +  D + LY   + +GT  Y+M
Sbjct: 266 NYGYKVDHHIMLNLPFSDFDKDKETINQ----IYTNEDFKPDAIKLYPTLVIRGTGLYEM 321

Query: 219 HKDGDL-VLPSENV 231
            K G     P E+V
Sbjct: 322 SKKGKYNPYPKEDV 335


>gi|78778066|ref|YP_394381.1| hypothetical protein Suden_1872 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498606|gb|ABB45146.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 319

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 2/110 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS+ +++L+ + R H+++     I  A+     +   LI+ LP +T        +
Sbjct: 164 IEFGIQSVYDETLKKINRGHDSANVKEWILKAKKSGLHVCGHLIFGLPDETQEMMLHTAK 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            A  + +D +  + L + K T        GD +  +E + +D   LT++I
Sbjct: 224 EAYLWGIDSVKYHPLYVVKKTALANDFTKGDFLPINEELYLD--TLTKAI 271


>gi|313759744|gb|ADR79184.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
 gi|313759746|gb|ADR79185.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
 gi|313759748|gb|ADR79186.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
          Length = 144

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFTQT 60

Query: 191 LQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAH 246
           +   L    D L+L+   ++       K  K+ D+    E  A+  Y    LT++   A 
Sbjct: 61  IADILHMRPDRLALFSFASVPWIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQAI 120

Query: 247 GLHAYEI 253
           GL  + +
Sbjct: 121 GLDHFSL 127


>gi|284173807|ref|ZP_06387776.1| histone acetyltransferase, ELP3 family protein [Sulfolobus
           solfataricus 98/2]
 gi|261602089|gb|ACX91692.1| histone acetyltransferase, ELP3 family [Sulfolobus solfataricus
           98/2]
          Length = 473

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 39/76 (51%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P   +  +     + G  ++ LGVQ++ +  L+F  R H   ++I +  + +
Sbjct: 141 VGMTIETKPDWAKEWHADQMLRLGATKVELGVQTVYDDILKFTNRGHTVKDSIESTRILK 200

Query: 166 NIFPRMSFDLIYALPK 181
           +   ++ + ++  LPK
Sbjct: 201 DSGFKVVYHIMLGLPK 216


>gi|227827892|ref|YP_002829672.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.14.25]
 gi|238620118|ref|YP_002914944.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.4]
 gi|227459688|gb|ACP38374.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.14.25]
 gi|238381188|gb|ACR42276.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.4]
 gi|323474979|gb|ADX85585.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           REY15A]
 gi|323477710|gb|ADX82948.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           HVE10/4]
          Length = 473

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           PS  +P  + L  D   KN       V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 116 PSYDKPSFVYL-EDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPK 216


>gi|320157397|ref|YP_004189776.1| putative Fe-S oxidoreductase [Vibrio vulnificus MO6-24/O]
 gi|319932709|gb|ADV87573.1| predicted Fe-S oxidoreductase [Vibrio vulnificus MO6-24/O]
          Length = 318

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 43/95 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L+
Sbjct: 142 LELGLQTASNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRNDNFTTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           + +    D + L+ L I +G+   K  + G L  P
Sbjct: 202 KVIEVGTDGIKLHGLHIVEGSTMAKAWRAGKLDAP 236


>gi|229585159|ref|YP_002843661.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.27]
 gi|228020209|gb|ACP55616.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.27]
          Length = 473

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           PS  +P  + L  D   KN       V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 116 PSYDKPSFVYL-EDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPK 216


>gi|158521512|ref|YP_001529382.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158510338|gb|ABW67305.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 341

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 10/226 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           TGQ    + V++    C  +C +CD ++   ++  +  ++        +Q+     G   
Sbjct: 3   TGQRPFIVPVFLPHAGCPHRCVFCDQDAITGQKASLTADDLHDHVHRYLQYRGDNRGHAQ 62

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I+  F+GG    L E +++  +L   +          I     P ++   N    +   V
Sbjct: 63  IA--FYGGNFLGL-ERESLTQMLHAASAFVDQGLVQAIRFSTRPDTITQKNLDLLKDYPV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + +GVQS++++ L    R H A ++ AA+ L +         L+  LP        + 
Sbjct: 120 TTVEVGVQSMDDRVLEKARRGHTAEQSTAALLLLKQAGYETGAQLMTGLPGD---DGRVS 176

Query: 191 LQRALSYAV---DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           ++ A   AV   D   +Y   +  G+   + ++ G+ +  + + AV
Sbjct: 177 IETAKKVAVLKPDFARIYPTLVITGSPLARHYRQGEYMPQTLDAAV 222


>gi|261342664|ref|ZP_05970522.1| radical SAM protein [Enterobacter cancerogenus ATCC 35316]
 gi|288315313|gb|EFC54251.1| radical SAM protein [Enterobacter cancerogenus ATCC 35316]
          Length = 327

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 44/92 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +        L+
Sbjct: 156 LELGLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQQHGLETLE 215

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + +   VD + L+ L I KG++  K  + G L
Sbjct: 216 KVVETGVDGIKLHPLHIVKGSIMAKAWEAGRL 247


>gi|283788147|ref|YP_003368012.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
 gi|282951601|emb|CBG91301.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
          Length = 305

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 7/107 (6%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  ++    L+
Sbjct: 142 LELGLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQSECLQTLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R +   VD + L+   I KG++  K  + G L      +A+D Y + 
Sbjct: 202 RVVETGVDGIKLH---IVKGSIMAKAWEAGRL----NGIALDEYTVA 241


>gi|121535189|ref|ZP_01667004.1| conserved hypothetical radical SAM protein [Thermosinus
           carboxydivorans Nor1]
 gi|121306180|gb|EAX47107.1| conserved hypothetical radical SAM protein [Thermosinus
           carboxydivorans Nor1]
          Length = 317

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 5/129 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           V I I   P  +     +   K    R     + LG+Q++   SL  + R H  +E I A
Sbjct: 110 VGIAIATRPDCINDAYLEAMAKVQAARGVDIAVELGLQTVNYHSLAKINRGHTLAEFIDA 169

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +   +     +   LI  LP   M       +   +  V  + L+ L I KGT   K ++
Sbjct: 170 VLRLKQYRFDVCAHLILNLPWDEMADVVENAKVLSALGVQQVKLHALYIVKGTPMAKWYE 229

Query: 221 DGDLVLPSE 229
            G+L L S+
Sbjct: 230 QGELTLVSK 238


>gi|195437773|ref|XP_002066814.1| GK24679 [Drosophila willistoni]
 gi|194162899|gb|EDW77800.1| GK24679 [Drosophila willistoni]
          Length = 550

 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L +
Sbjct: 218 IGITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGK 277

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMH 219
           +   ++   ++  LP      +E ++ + + Y        D L +Y   + +GT  Y++ 
Sbjct: 278 DAGYKIVAHMMPDLPN---VDFERDIDQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELW 334

Query: 220 KDGDLVLPSENVAVDL 235
           + G       ++ VDL
Sbjct: 335 RTGRYKSYPPSMLVDL 350


>gi|160902226|ref|YP_001567807.1| putative radical SAM protein [Petrotoga mobilis SJ95]
 gi|160359870|gb|ABX31484.1| conserved hypothetical radical SAM protein [Petrotoga mobilis SJ95]
          Length = 304

 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/93 (22%), Positives = 45/93 (48%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LGV+S    +L+++ R H+ +E I +++  +     +    I   P  T+   +   +
Sbjct: 140 VELGVESTNPNTLKYMNRGHSLAEVIDSVNRLKKAELEVILHYIIDFPCDTLEDVKEMAK 199

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            + +  VD + L+ L I + T    ++K G+ V
Sbjct: 200 VSSALKVDGVKLHSLYIVENTKLADLYKSGEFV 232


>gi|9758914|dbj|BAB09451.1| histone acetyltransferase [Arabidopsis thaliana]
 gi|15810049|gb|AAL06951.1| AT5g50320/MXI22_3 [Arabidopsis thaliana]
 gi|22137026|gb|AAM91358.1| At5g50320/MXI22_3 [Arabidopsis thaliana]
          Length = 559

 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +     
Sbjct: 223 SATKCIGMTIETRPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADC 282

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
             LA++   ++   ++  LP    ++ M  ++ E   + S+  D L +Y   + +GT  Y
Sbjct: 283 FCLAKDAGFKVVAHMMPDLPNVGVERDMESFK-EFFESPSFRADGLKIYPTLVIRGTGLY 341

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 342 ELWKTG 347


>gi|300814185|ref|ZP_07094466.1| oxygen-independent coproporphyrinogen-III oxidase 2 domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511703|gb|EFK38922.1| oxygen-independent coproporphyrinogen-III oxidase 2 domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 80

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGVN 131
           +I+ GGGTPS I  + +  I+D + K++  +   E T+E   +    ++  +  ++ GV+
Sbjct: 7   TIYIGGGTPSSIGWKRLEKIIDEVYKDYGFAD--EFTVECGRTDTFSSDLLRMLKEKGVD 64

Query: 132 RISLGVQSLEEQSLR 146
           RIS+  QS  ++ +R
Sbjct: 65  RISINPQSFNKEIIR 79


>gi|189462252|ref|ZP_03011037.1| hypothetical protein BACCOP_02938 [Bacteroides coprocola DSM
          17136]
 gi|189431054|gb|EDV00039.1| hypothetical protein BACCOP_02938 [Bacteroides coprocola DSM
          17136]
          Length = 48

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 20 GVYVHWPFCVKKCPYCDFNSHVRRYK 45
          G+Y+H PFC ++C YCDF S  +  K
Sbjct: 11 GIYLHIPFCKRRCIYCDFYSTTQNEK 36


>gi|21227624|ref|NP_633546.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
 gi|20906012|gb|AAM31218.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
          Length = 374

 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 111 EANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNI 167
           E  P  V   + +  RK   N  +SLG QS  ++ L+ + R H   ++I+A+   L  +I
Sbjct: 232 EVRPEFVTEESVELVRKYCANDSLSLGAQSGSDRILKEIRRGHTVEDSISAVECCLEHDI 291

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQ 192
            P  + D I+ LP +T    E  L+
Sbjct: 292 MP--AVDFIFGLPTETEEDQEKSLE 314


>gi|37678826|ref|NP_933435.1| Fe-S oxidoreductase [Vibrio vulnificus YJ016]
 gi|37197567|dbj|BAC93406.1| predicted Fe-S oxidoreductase [Vibrio vulnificus YJ016]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 43/95 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L+
Sbjct: 154 LELGLQTASNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFTTLE 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           + +    D + L+ L I +G+   K  + G L  P
Sbjct: 214 KVIEVGTDGIKLHGLHIVEGSTMAKAWRAGKLDAP 248


>gi|326510203|dbj|BAJ87318.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 238 IGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP     + +ME  R      ++  D L +Y   + +GT  Y++ K 
Sbjct: 298 DAGFKVVAHMMPDLP-NVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKT 356

Query: 222 G 222
           G
Sbjct: 357 G 357


>gi|223040541|ref|ZP_03610813.1| biotin synthase [Campylobacter rectus RM3267]
 gi|222878176|gb|EEF13285.1| biotin synthase [Campylobacter rectus RM3267]
          Length = 350

 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 18/181 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
            C K+C YC     N  ++RYK+  E  +            ++G +++       G    
Sbjct: 61  ICAKECFYCGLRSKNKDIKRYKMSAEEIVSR-----AKEAAMSGYKTV---VMQSGESGA 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   I  I+  I K      +V+IT+     S E   ++ Y+KAG +R  L +++ +  
Sbjct: 113 FKDDEICEIIREIKK-----FDVQITLSFGEKSFE--QYRAYKKAGADRYLLRIETADRA 165

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L  N +    I  +   RN+       L+  LP  +      +L     Y  D + 
Sbjct: 166 LYKALHPNMSLKNRIKCLENLRNLGYETGSGLLVGLPGSSAKILARDLMFLKKYDFDMIG 225

Query: 204 L 204
           +
Sbjct: 226 I 226


>gi|261343905|ref|ZP_05971550.1| radical SAM protein [Providencia rustigianii DSM 4541]
 gi|282568291|gb|EFB73826.1| radical SAM protein [Providencia rustigianii DSM 4541]
          Length = 300

 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 6/125 (4%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P SV ++    YR+ G    + LG+Q+  +++L  + R H           AR +  ++ 
Sbjct: 123 PESV-LSLLSHYRQQGYEIWLELGLQTAHDKTLHRINRGHGFEAYQQTTQKARALGLKVC 181

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI  LP +        L+R L    D + L+ L I +G++  K  + G L    + ++
Sbjct: 182 THLICGLPGEDAAMNMQTLERVLECGTDGIKLHPLHIVEGSVMAKSWRAGRL----QTIS 237

Query: 233 VDLYN 237
           +D Y 
Sbjct: 238 LDEYT 242


>gi|284519770|gb|ADB92637.1| putative histone acetyltransferase ELP3 [Hordeum vulgare]
 gi|326506608|dbj|BAJ91345.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326530091|dbj|BAK08325.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 238 IGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP     + +ME  R      ++  D L +Y   + +GT  Y++ K 
Sbjct: 298 DAGFKVVAHMMPDLP-NVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKT 356

Query: 222 G 222
           G
Sbjct: 357 G 357


>gi|271498887|ref|YP_003331912.1| hypothetical protein Dd586_0310 [Dickeya dadantii Ech586]
 gi|270342442|gb|ACZ75207.1| conserved hypothetical protein [Dickeya dadantii Ech586]
          Length = 314

 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 3/153 (1%)

Query: 75  FFGGGTPSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   T +  E Q +A +    +A+   V   V    +  P +V ++    Y + G    
Sbjct: 88  YFQAYTSTYAEVQVLASMYRQALAQADIVGLCVGTRPDCVPDTV-LDLLADYHEQGYEVW 146

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++LR + R H+ +     +  AR    ++   LI  LP +        LQ
Sbjct: 147 LELGLQSAHDRTLRRINRGHDFACYQQTVQRARARGLKVCSHLIVGLPGERDEHCLSTLQ 206

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           R +   V+ + L+ L I  G++  K  + G L 
Sbjct: 207 RVVEAGVEGIKLHPLHIVTGSVMAKAWQAGRLA 239


>gi|109716226|gb|ABG43095.1| histone acetyltransferase HAT2 [Triticum aestivum]
          Length = 569

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 238 IGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAK 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP     + +ME  R      ++  D L +Y   + +GT  Y++ K 
Sbjct: 298 DAGFKVVAHMMPDLP-NVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKT 356

Query: 222 G 222
           G
Sbjct: 357 G 357


>gi|18423134|ref|NP_568725.1| ELO3 (ELONGATA 3); histone acetyltransferase [Arabidopsis thaliana]
 gi|75305923|sp|Q93ZR1|ELP3_ARATH RecName: Full=Elongator complex protein 3; AltName: Full=Elongator
           component 3; AltName: Full=Protein ELONGATA 3
 gi|15810569|gb|AAL07172.1| putative histone acetyltransferase [Arabidopsis thaliana]
 gi|66841024|emb|CAI79647.1| elongator component [Arabidopsis thaliana]
 gi|332008542|gb|AED95925.1| Elongator complex protein 3 [Arabidopsis thaliana]
          Length = 565

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           + +  + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +     
Sbjct: 229 SATKCIGMTIETRPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADC 288

Query: 161 IHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
             LA++   ++   ++  LP    ++ M  ++ E   + S+  D L +Y   + +GT  Y
Sbjct: 289 FCLAKDAGFKVVAHMMPDLPNVGVERDMESFK-EFFESPSFRADGLKIYPTLVIRGTGLY 347

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 348 ELWKTG 353


>gi|158314912|ref|YP_001507420.1| radical SAM domain-containing protein [Frankia sp. EAN1pec]
 gi|158110317|gb|ABW12514.1| Radical SAM domain protein [Frankia sp. EAN1pec]
          Length = 487

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 15/138 (10%)

Query: 82  SLIEPQNIALILD-----GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           + I+P +   I D     GI K + + +  ++ +  +P       FQ +R+ G+  + LG
Sbjct: 237 AFIKPDHGNAIADQIERRGIRKRYYLETRADVLLR-HPEV-----FQRWRRLGLTYMFLG 290

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +++L+ + L    +  +  E I A+ LAR I   ++ +LI A P  +  Q+ +  Q ALS
Sbjct: 291 MEALDAEGLDLFHKRISPDENIKALELARKIGITVAVNLI-ADPAWSRDQFRLVRQWALS 349

Query: 197 YA-VDHLSLYQLTIEKGT 213
              + HL++  +T   GT
Sbjct: 350 VPEIVHLTV--MTPYPGT 365


>gi|315231475|ref|YP_004071911.1| histone acetyltransferase [Thermococcus barophilus MP]
 gi|315184503|gb|ADT84688.1| histone acetyltransferase [Thermococcus barophilus MP]
          Length = 589

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 14/244 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  R+ LGVQ++       + R H   + + A  L +
Sbjct: 237 VGLTIETRPDWSFERHIDRMLAFGTTRVELGVQTVFNFIYERVKRGHTVEDVVRATQLLK 296

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++++ ++  LP    ++ +  +++  + +  +  D L +Y   + + T+ YK +K+
Sbjct: 297 DAGLKVNYHMMPGLPGSNFERDLKAFQIIFEDS-RFKPDMLKIYPTLVTEDTILYKWYKE 355

Query: 222 GDLVLPSENVA----VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI- 276
           G     +   A    V++Y +         +   +I            NL    + + I 
Sbjct: 356 GKYRPYTTEEAVRLLVEVYKIIPKWVRVMRIQR-DIPVPLIAAGVKHSNLGQLVFNELIR 414

Query: 277 -GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            GI P      +VG       I+   E  +K++R++  A   +E FLS E   ++ L+  
Sbjct: 415 EGIRPREIRFREVGHVMQKFGIQPEVEH-IKLLREDYEASEGREIFLSFEDVKNDILIGF 473

Query: 335 LRLR 338
           LRLR
Sbjct: 474 LRLR 477


>gi|18978273|ref|NP_579630.1| oxygen-independent coproporphyrinogen III oxidase [Pyrococcus
           furiosus DSM 3638]
 gi|18894094|gb|AAL82025.1| oxygen-independent coproporphyrinogen III oxidase [Pyrococcus
           furiosus DSM 3638]
          Length = 640

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 16/245 (6%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++       +GR H   E I A  L R
Sbjct: 288 VGLTIETRPDWAFERQIDRMLAFGTTRVELGVQTIFNFIHERVGRGHGVEEIIKATQLLR 347

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++++ ++  LP     + ++ + + +     +  D L +Y   + +    Y  +K 
Sbjct: 348 DAGLKINYHIMPGLPGSNFER-DLYVFKTIFEDPRFRPDMLKIYPTLVTRDAPLYAWYKA 406

Query: 222 GDLVLPSENVAVDL----YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI- 276
           G     +   AV+L    Y +         +   +I +H  +      NL    + + + 
Sbjct: 407 GLYKPYTTEEAVELLVEAYKIFPKWVRVMRIQR-DIPSHLIVAGVKHSNLGQLVFEELVR 465

Query: 277 -GIGPGAHSRVKVGSHRVAISIEKHPE-SWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
            GI P      +VG H++     K PE   +K++R++  A    E FLS E   ++ L+ 
Sbjct: 466 RGIRPREIRFREVG-HQMQ-KFGKMPEIEHIKLLREDYEAGEGTEIFLSFEDVKNDILIG 523

Query: 334 GLRLR 338
            LRLR
Sbjct: 524 FLRLR 528


>gi|220903451|ref|YP_002478763.1| hypothetical protein Ddes_0165 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867750|gb|ACL48085.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 347

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 49/103 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS    +LR + R H+ + +  A+  A      +   L+  LP +    +   L 
Sbjct: 176 LELGLQSAHNATLRRINRGHDTACSETAVRQAAERGLAVCGHLMAGLPGEDEAAFLESLD 235

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            ALS  +  L L+ + + +GT   +++++G     + +  VDL
Sbjct: 236 WALSLPLSGLKLHNVYVPRGTSLARLYEEGGYHPLARDEYVDL 278


>gi|302791105|ref|XP_002977319.1| hypothetical protein SELMODRAFT_417268 [Selaginella moellendorffii]
 gi|300154689|gb|EFJ21323.1| hypothetical protein SELMODRAFT_417268 [Selaginella moellendorffii]
          Length = 185

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA+
Sbjct: 47  IGLTIETRPDYCLSPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAK 106

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  L    M + +ME  R      S+  D L +Y+  + +GT  Y++ K 
Sbjct: 107 DAGFKVVAHMMPNLRNVDM-ERDMESFREFFENHSFRADGLKIYRTLVIQGTGLYELWKT 165

Query: 222 G 222
           G
Sbjct: 166 G 166


>gi|269960266|ref|ZP_06174641.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835073|gb|EEZ89157.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 314

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 43/95 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       ++
Sbjct: 142 LELGLQTANNDTLKRINRGHDFECYAEITKRARALGIKVCTHLIVGLPKETRDDNIETMR 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           + L    D + L+ L I +G+   K  + G L  P
Sbjct: 202 KVLEVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAP 236


>gi|281411734|ref|YP_003345813.1| hypothetical protein Tnap_0295 [Thermotoga naphthophila RKU-10]
 gi|281372837|gb|ADA66399.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10]
          Length = 303

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
            S V++++   P  V    ++ F+ ++K     + LG+Q+   ++L+ + R H  +E + 
Sbjct: 106 DSIVQLSVSTRPDLVPERVLDLFEEFKKRVDVSVELGLQTANYRTLKKINRGHTLAEFVD 165

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKM 218
           A    +     +   +I  LP   M    +E  + LS   VD + L+ L + +GT   +M
Sbjct: 166 AAVRVKKRGIELVVHVILNLPWDDMEDV-VETAKILSALDVDGVKLHSLYVVEGTKLAEM 224

Query: 219 HKDGDLVLPSENVAVD 234
           +K G++ + S    +D
Sbjct: 225 YKKGEIKICSLEEYID 240


>gi|27364014|ref|NP_759542.1| hypothetical protein VV1_0552 [Vibrio vulnificus CMCP6]
 gi|27360131|gb|AAO09069.1| hypothetical protein VV1_0552 [Vibrio vulnificus CMCP6]
          Length = 318

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 43/95 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L+
Sbjct: 142 LELGLQTASNSTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFATLE 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           + +    D + L+ L I +G+   K  + G L  P
Sbjct: 202 KVIEVGADGIKLHGLHIVEGSTMAKAWRAGKLDAP 236


>gi|37521804|ref|NP_925181.1| hypothetical protein glr2235 [Gloeobacter violaceus PCC 7421]
 gi|35212802|dbj|BAC90176.1| glr2235 [Gloeobacter violaceus PCC 7421]
          Length = 326

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 44/98 (44%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS  +Q+L  + R H  +E + A+   R     +   LI+ LP  T       + 
Sbjct: 159 VEYGLQSAHDQTLARINRAHTVAEFVDAVRRTRGRGIEVCAHLIHGLPGDTPAMMLQSVD 218

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              S  V+ + ++ L I KG++    +  G++ L S  
Sbjct: 219 LLASLGVEGVKIHSLHIVKGSVMAGQYLRGEIPLMSRT 256


>gi|328955192|ref|YP_004372525.1| Histone acetyltransferase [Coriobacterium glomerans PW2]
 gi|328455516|gb|AEB06710.1| Histone acetyltransferase [Coriobacterium glomerans PW2]
          Length = 614

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P +V   + +  R+ G  ++ +G+QSL++  L   GR         A  L R
Sbjct: 287 VGLVIETRPDAVTAESLRLLRRLGCTKVQMGIQSLDQGILDANGRGITVDRIERACSLLR 346

Query: 166 ----NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                       +L+ A P++    +E  L    ++  D + LY   + +G      + D
Sbjct: 347 LFGFKTHVHFMVNLMGATPERDRRDYE-RLVGDPAFLPDEVKLYPCVLVQGARLASCYAD 405

Query: 222 G 222
           G
Sbjct: 406 G 406


>gi|227500107|ref|ZP_03930178.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217822|gb|EEI83119.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus tetradius
           ATCC 35098]
          Length = 359

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/209 (18%), Positives = 88/209 (42%), Gaps = 13/209 (6%)

Query: 19  LGVYVHWPFCVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +++ +  C   C +C+       + K+ +E  I      + +  Q    ++    FFG
Sbjct: 8   IPIFIPFLGCPHDCAFCNQLKITNFKDKLDREKIIAEIEKNLSYFPQ---AKATELAFFG 64

Query: 78  GGTPSLIEPQNIALILDG---IAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRI 133
           G    L E      ++ G   IAK +     ++ I +   P  +  +  +  +   V+ I
Sbjct: 65  GSFTGLDED-----VMKGYLSIAKEYKEKGIIDRIRLSTRPDYINNSILEILKAYQVDII 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+QSL+++ L    R H+  +++ A  L ++    +   ++  L + T  +      +
Sbjct: 120 ELGIQSLDQEILDANERGHSVDDSLMASELIKSFGFSLGHQVMPGLFRDTKDKSIQTAIK 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           + +   D + +Y   + K T   K+++ G
Sbjct: 180 SANMKPDMVRIYPTLVIKDTKLEKLYQAG 208


>gi|313899453|ref|ZP_07832963.1| radical SAM domain protein [Clostridium sp. HGF2]
 gi|312955741|gb|EFR37399.1| radical SAM domain protein [Clostridium sp. HGF2]
          Length = 557

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 1/107 (0%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G  R  +GVQS   ++L  +GR  N    I  I   +     M  DLI  LP + +  ++
Sbjct: 275 GRFRFEIGVQSFHTRTLHAVGRTQNNERLIEVIQRLKASGAVMHVDLIAGLPYEDLNLFQ 334

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +      S     L L  L + KGT      +    V   EN   D+
Sbjct: 335 VSFDTLFSLQASELQLGILKLLKGTKLRSQRESYHFVF-QENAPYDV 380


>gi|157738290|ref|YP_001490974.1| hypothetical protein Abu_2087 [Arcobacter butzleri RM4018]
 gi|157700144|gb|ABV68304.1| conserved hypothetical protein, radical SAM domain protein
           [Arcobacter butzleri RM4018]
          Length = 320

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 43/102 (42%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS  +++L  + R    S     I   ++   ++   LIY LP +T        +
Sbjct: 165 IEYGIQSFFDETLVKINRGDTVSNMKYWIKRTKDRGLKVCGHLIYGLPNETQEMMLETFK 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + L   VD +  + L + K TL     + G     SE + +D
Sbjct: 225 QTLELEVDSIKFHPLYVVKNTLLTNDFRKGRFTPISEELYID 266


>gi|303283528|ref|XP_003061055.1| histone acetyltransferase [Micromonas pusilla CCMP1545]
 gi|226457406|gb|EEH54705.1| histone acetyltransferase [Micromonas pusilla CCMP1545]
          Length = 525

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      + +     G  R+ +G+QS+ E   R   R H          LA+
Sbjct: 191 VGLTIETRPDYCLSPHLRQMLLYGCTRLEIGLQSIYEDVARDTNRGHTVEAVQKCFELAK 250

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP   M + ++E  R       +  D L LY   + +GT  Y++ + 
Sbjct: 251 DAGFKVVVHMMPDLPNVGM-ERDLESFREFFESPDFRTDGLKLYPTLVIRGTGLYELWRT 309

Query: 222 G 222
           G
Sbjct: 310 G 310


>gi|159045769|ref|YP_001534563.1| MiaB-like tRNA modifying enzyme [Dinoroseobacter shibae DFL 12]
 gi|157913529|gb|ABV94962.1| MiaB-like tRNA modifying enzyme [Dinoroseobacter shibae DFL 12]
          Length = 416

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q+ ++  L+ + R H   +AIA    AR + P M+F  D+I   P +T   +E  
Sbjct: 250 LHLSLQAGDDLILKRMKRRHLRDDAIAFCEEARRLRPEMTFGADIIAGFPTETEAMFENS 309

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           L+      +  L ++  +  KGT   +M
Sbjct: 310 LRLVTDCDLTWLHVFPYSPRKGTPAARM 337


>gi|291277136|ref|YP_003516908.1| hypothetical protein HMU09230 [Helicobacter mustelae 12198]
 gi|290964330|emb|CBG40180.1| conserved hypothetical protein [Helicobacter mustelae 12198]
          Length = 320

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 42/86 (48%)

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS+ ++SL+   R H ++         R+   ++   LIY LP++        L   L
Sbjct: 168 GIQSVFDESLKRTNRGHLSAGIPELFSRTRDHGIKVCAHLIYGLPQENEDMMLHSLDTVL 227

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
            + +D + ++ L + K T   KM+K+
Sbjct: 228 DWGIDGIKIHPLYVVKDTPLAKMYKN 253


>gi|298530185|ref|ZP_07017587.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509559|gb|EFI33463.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 486

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   + Y+     +I      M+++ Q    R I+  +    +  L   +
Sbjct: 217 CPYSCSYCDRSVFQKSYRFNSAEYIYE---HMRYLNQHFKVRHIN-FYDDQFSFKLKRLE 272

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +L  + +   +S N  +  E    S+     +  + AG   ISLG++S ++  L  
Sbjct: 273 RLTDML--VNRPLNMSFNCAVRSEHLTESL----LKRLKDAGCWMISLGIESGDQDMLHA 326

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L R  N  +    + L +    R+   L+  +P +T    E   Q   S  VD  +L + 
Sbjct: 327 LNRKVNLEKLAERVRLIKKYGIRVKGLLMIGMPGETEASVEKTRQFLFSLPVDDFNLTKF 386

Query: 208 TIEKGTLFYKMHKD-GDL 224
           T   G   Y+  ++ GD 
Sbjct: 387 TPFPGAPVYRTIREYGDF 404


>gi|20093484|ref|NP_613331.1| hypothetical protein MK0044 [Methanopyrus kandleri AV19]
 gi|19886313|gb|AAM01261.1| Uncharacterized Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 335

 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 114 PSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           P  V ++  +GY K G +  + +GVQS   ++LR   R H  +E I AI  A+    R+ 
Sbjct: 130 PDEV-LDILEGYVKEGYDVWLEIGVQSYHHRTLRRTRRGHGLAEVIDAITRAKERGIRIV 188

Query: 173 FDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKD 221
             +I+ LP +T  +  +E  R LS   V+ + LY L + + T   +M+ D
Sbjct: 189 NHIIFGLPGETRDEM-LETVRVLSVLGVEAVKLYPLVVLERTDLERMYYD 237


>gi|127511966|ref|YP_001093163.1| putative radical SAM protein [Shewanella loihica PV-4]
 gi|126637261|gb|ABO22904.1| conserved hypothetical radical SAM protein [Shewanella loihica
           PV-4]
          Length = 330

 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 8/157 (5%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAI 158
           S  V + +   P  V    +    GY+  G+   + LG+QS   ++L+ + R H   E  
Sbjct: 128 SDIVGLCVGTRPDCVSDEVIALLAGYQARGLEVWLELGLQSANLETLKRINRGHGFEEYR 187

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             +  AR    ++   LI  LP ++   +    +  L   VD L ++ L I +G+   K 
Sbjct: 188 DTVIRARKAGLKVCTHLILGLPGESHEDFLASHRAVLDAGVDGLKIHPLHIVEGSTMAKA 247

Query: 219 HKDGDLVLPSENVAV----DLYNLTQSITSAHGLHAY 251
            + G + L ++        +L  LT      H + AY
Sbjct: 248 WRAGRMSLLTQEAYAESVGELIRLTPKEVIFHRVTAY 284


>gi|78043108|ref|YP_359752.1| radical SAM family protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995223|gb|ABB14122.1| radical SAM protein, TIGR01212 family [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 316

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++  ++L  + R H  +E I A+   +     ++  LI  LP +T+       +
Sbjct: 144 VELGLQTVNYKNLIAINRGHTLAEFIDAVLRIKKFGLNVTTHLILNLPGETLVDVIENAK 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSE 229
              +  +D + L+ L I + T+   M+++G + ++P E
Sbjct: 204 IMSALKIDFVKLHTLFIPEKTVLGDMYREGKIEIIPLE 241


>gi|237838329|ref|XP_002368462.1| hypothetical protein TGME49_090680 [Toxoplasma gondii ME49]
 gi|211966126|gb|EEB01322.1| hypothetical protein TGME49_090680 [Toxoplasma gondii ME49]
          Length = 2830

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 160  AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR---ALSYAVDHLSLYQLTIEKG-TLF 215
            A HLA ++FP  S + +    K+     E  L     +LS+    L L Q++ E     F
Sbjct: 1049 APHLAASLFPAPSVENLEKHRKELAQVVEAALSSRGGSLSFLRMPLVLAQISGELVLAYF 1108

Query: 216  YKMHKDGDLVLPSENVAVDLYNLTQSITSAH-----GLHAYEISNHSFLGAESLHNLNYW 270
            Y +     L+  S N AV L+NL ++           +HA   S H +L  ++LH++   
Sbjct: 1109 YTL---ALLLRESRNCAVSLWNLLEACVEDPESFFLAMHAPTFSKHPWLNLQALHDILRE 1165

Query: 271  RYGD 274
            RYGD
Sbjct: 1166 RYGD 1169


>gi|95929100|ref|ZP_01311845.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684]
 gi|95135001|gb|EAT16655.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684]
          Length = 305

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 3/129 (2%)

Query: 101 TVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           +V   V + +   P  +    ++  Q Y +     + LGVQS  +++L FL R H+    
Sbjct: 108 SVKDVVGLAVGTRPDCLGDDVLDLLQEYHQRTYFWLELGVQSCHDKTLNFLRRGHDYGCF 167

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           + A + A+    R+   +I  LP ++  +            VD + ++ L + K T    
Sbjct: 168 VDAYNRAKQRGLRVCVHVILGLPGESHKEMMATADEMARLKVDGIKVHLLHVLKDTALGD 227

Query: 218 MHKDGDLVL 226
           +++ G   L
Sbjct: 228 LYEQGAFTL 236


>gi|189423866|ref|YP_001951043.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189420125|gb|ACD94523.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 489

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/145 (20%), Positives = 61/145 (42%), Gaps = 3/145 (2%)

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           +++ Q+   I+DGI +      ++ I   A   +++  N    ++AG+N ++LG++S   
Sbjct: 274 VLKEQHYMAIVDGIIER---GLDLNIWAYARVDTIKTANLARMKQAGINWLALGIESASP 330

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
                  +   A +    +   R    R+  + I+ LP  T    E  LQ A+    + +
Sbjct: 331 DVRDGADKRMQARDIKEVVRSIREQGIRIIGNFIFGLPDDTRETMEETLQLAMELNCEFI 390

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLP 227
           + Y      G+  Y +  +    LP
Sbjct: 391 NFYCAMAYPGSRLYDLAVEQGWELP 415


>gi|237737606|ref|ZP_04568087.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419486|gb|EEO34533.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 341

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 2/117 (1%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I +   P  +        +K GV  + LGVQSL+E+ L    R +  S    A    +  
Sbjct: 92  IRLSTRPDCINDEIVAQLKKYGVTSVELGVQSLDEEVLLATERYYPVSVVAEACKTIKKY 151

Query: 168 FPRMSFDLIYALPKQT-MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +   L+  LPK T  + +E  + +AL    D + +Y   + K T    M   G+
Sbjct: 152 GIELGIQLMIGLPKSTDESDYETAV-KALDMEPDMVRIYPTLVIKNTKMENMFLKGE 207


>gi|221505751|gb|EEE31396.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 2828

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 160  AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR---ALSYAVDHLSLYQLTIEKG-TLF 215
            A HLA ++FP  S + +    K+     E  L     +LS+    L L Q++ E     F
Sbjct: 1049 APHLAASLFPAPSVENLEKHRKELAQVVEAALSSRGGSLSFLRMPLVLAQISGELVLAYF 1108

Query: 216  YKMHKDGDLVLPSENVAVDLYNLTQSITSAH-----GLHAYEISNHSFLGAESLHNLNYW 270
            Y +     L+  S N AV L+NL ++           +HA   S H +L  ++LH++   
Sbjct: 1109 YTL---ALLLRESRNCAVSLWNLLEACVEDPESFFLAMHAPTFSKHPWLNLQALHDILRE 1165

Query: 271  RYGD 274
            RYGD
Sbjct: 1166 RYGD 1169


>gi|221484268|gb|EEE22564.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 2809

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 160  AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR---ALSYAVDHLSLYQLTIEKG-TLF 215
            A HLA ++FP  S + +    K+     E  L     +LS+    L L Q++ E     F
Sbjct: 1049 APHLAASLFPAPSVENLEKHRKELAQVVEAALSSRGGSLSFLRMPLVLAQISGELVLAYF 1108

Query: 216  YKMHKDGDLVLPSENVAVDLYNLTQSITSAH-----GLHAYEISNHSFLGAESLHNLNYW 270
            Y +     L+  S N AV L+NL ++           +HA   S H +L  ++LH++   
Sbjct: 1109 YTL---ALLLRESRNCAVSLWNLLEACVEDPESFFLAMHAPTFSKHPWLNLQALHDILRE 1165

Query: 271  RYGD 274
            RYGD
Sbjct: 1166 RYGD 1169


>gi|15643281|ref|NP_228325.1| hypothetical protein TM0515 [Thermotoga maritima MSB8]
 gi|4981028|gb|AAD35600.1|AE001728_1 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 303

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 103 SSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
            S V++++   P  V    ++ F+ ++K     + LG+Q+   ++L+ + R H  +E + 
Sbjct: 106 DSIVQLSVSTRPDLVPERVLDLFEEFKKRVDVSVELGLQTANYRTLKKINRGHTLAEFVD 165

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKM 218
           A    +     +   +I  LP   M    +E  + LS   VD + L+ L + +GT   +M
Sbjct: 166 AAVRVKKRGIELVVHVILNLPWDDMEDV-VETAKILSALDVDGVKLHSLYVVEGTKLAEM 224

Query: 219 HKDGDLVLPSENVAVD 234
           +K G++ + S    +D
Sbjct: 225 YKKGEVKICSLEEYID 240


>gi|322418157|ref|YP_004197380.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124544|gb|ADW12104.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 504

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 15/177 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C++KC +C       R    +    ++F+ E++ +R   G   +         P+  + +
Sbjct: 205 CMEKCSFCSQQLFWERSWRARSP--ENFVAELELLRDSYG---VEVAMLSDEIPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +  + YR+AGV  I +GV++ ++++L
Sbjct: 259 RWVRILDLMIER---KVGVKLLMETRVDDILRDADVMEKYREAGVEHIYVGVEAGDQETL 315

Query: 146 RFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +N    ++ AAI +  N  I    SF  +  +P  T       ++ A  Y  D
Sbjct: 316 DLFNKNTKVEQSKAAIDIINNADIVSETSF--VLGMPDDTPESIAKTIELAKHYNPD 370


>gi|310829265|ref|YP_003961622.1| putative radical SAM protein [Eubacterium limosum KIST612]
 gi|308740999|gb|ADO38659.1| putative radical SAM protein [Eubacterium limosum KIST612]
          Length = 356

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE---- 188
           I LG+Q+   ++L+ L R H+ S+ I A    +N   ++   +I  LP      W+    
Sbjct: 182 IELGLQTANYKTLKILNRGHSLSDYIEAAVAVKNHGLQLCTHVILDLP------WDDRDD 235

Query: 189 -MELQRALSYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSE 229
            +E    +S A  D +  + L +EKGT+  +M+  G++ L P E
Sbjct: 236 VVETAGVVSAAGSDFVKCHALYVEKGTVLAEMYLKGEISLFPKE 279


>gi|284115804|ref|ZP_06386693.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829554|gb|EFC33903.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 436

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 25/209 (11%)

Query: 28  CVKKCPYC--------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C KKC YC        + N  +          I   + E+  + Q      +  + FG  
Sbjct: 154 CNKKCAYCIVPTVRGSEVNRPIEDIIAEARYLIAKGVKEITLIGQTVNSWKLGGLKFGDL 213

Query: 80  TPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
              L E       LDG+ +  +T S   +IT +   +  +V             I L VQ
Sbjct: 214 LRVLGE-------LDGLERIRFTTSYPRDITKKMVEAMADVPKV-------CRHIHLPVQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ LR + R ++ S  I +++  R+  P +  S D+I   P +T   +E  +     
Sbjct: 260 SGSDKVLRLMNRTYSRSWYIDSVNRLRDAMPNIAVSSDIIVGFPGETEDDFEQTMSLVEE 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              D    ++ +   GT+  ++ + G+ V
Sbjct: 320 VGFDSSFSFKYSPRPGTVGEELWRSGERV 348


>gi|145544531|ref|XP_001457950.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425769|emb|CAK90553.1| unnamed protein product [Paramecium tetraurelia]
          Length = 546

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  + ITIE  P   + ++       G  RI +GVQS+ E   R   R H          
Sbjct: 216 SKCIGITIETRPDFCQKSHLSDMLLYGCTRIEVGVQSIYEDIARDTNRGHTVESVKKCFA 275

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKM 218
           ++++   ++   ++  LP   + + ++E  +       +  D L +Y   + +GT  Y++
Sbjct: 276 MSKDSGYKVVTHMMPDLPNMGV-ERDLESFKEFFENPDFRPDGLKIYPTLVIRGTGLYEL 334

Query: 219 HKDG 222
            K+G
Sbjct: 335 WKNG 338


>gi|307153815|ref|YP_003889199.1| LuxR family two component transcriptional regulator [Cyanothece sp.
           PCC 7822]
 gi|306984043|gb|ADN15924.1| two component transcriptional regulator, LuxR family [Cyanothece
           sp. PCC 7822]
          Length = 744

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 36/187 (19%), Positives = 77/187 (41%), Gaps = 14/187 (7%)

Query: 19  LGVYVHWPFCVKKCPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L V V  P   + CP+ C F S  + ++  +    ++F+ E+++   L    ++      
Sbjct: 191 LNVRVAVPNFARGCPFRCRFCSQWKFWRKYRSRTPKNFVDEIEY---LVKEHNVGFFILA 247

Query: 78  GGTPSLIEPQNIALILDGIAK----NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
              P++ +P+ +AL  + I +    +W +++ V   +       +      YR+AG+  +
Sbjct: 248 DEEPTITKPRFVALCKELIERKLNVHWGINTRVTDILR------DEKELPLYRQAGLVHV 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG ++  + +L    +     +   A+ L R          I  L  +T+   E   + 
Sbjct: 302 SLGTEAAAQLNLNVFRKETTIEDNKRAVRLLRENGIVAEVQYIMGLENETLETIEETYRM 361

Query: 194 ALSYAVD 200
           A  +  D
Sbjct: 362 ARDWKAD 368


>gi|170289794|ref|YP_001736610.1| magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173874|gb|ACB06927.1| Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 483

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 17/154 (11%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G    GV +    C   C +C  +S ++   + + + ++  + E++ +R+  G R I   
Sbjct: 191 GKLRYGVIMSSRGCPFNCIFC--SSSLQFGSIWRAHSVRRVVEELRLLREDFGIREIE-- 246

Query: 75  FFGGGTPSL--IEPQNIA--LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            F   T +L     + I   ++ +GI  +W+ SS V        ++++       R+AG 
Sbjct: 247 -FLDDTFTLNRKRAREICDEIVREGIDLSWSASSRV--------NTLDRETADSMRRAGA 297

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           + + LG++S  ++ L F+G+    ++A+ A+  A
Sbjct: 298 HTVYLGIESGTQRVLDFIGKGITVTQAVDAVKTA 331


>gi|225567962|ref|ZP_03776987.1| hypothetical protein CLOHYLEM_04035 [Clostridium hylemonae DSM
           15053]
 gi|225163250|gb|EEG75869.1| hypothetical protein CLOHYLEM_04035 [Clostridium hylemonae DSM
           15053]
          Length = 318

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 10/161 (6%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T + + P++    +   AK   +   VEI +   P  +        +K       
Sbjct: 84  YFQNYTNTFLPPESFRAYVTEAAK---IKDIVEIAVSTRPDCITEEYLDILQKVSREHQV 140

Query: 133 ---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++   +L  +GR H  +  I A+ + R+    +   +I  LP    +   +
Sbjct: 141 EITVELGLQTVNYHTLEKIGRGHTLAAFIDAVLMIRSYGFDICTHVILNLPWDDRSDC-L 199

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           E  R LS   V+ + ++ L + K T   + +++G + L S+
Sbjct: 200 ETARVLSALKVNAVKIHSLYVAKNTPLCEAYENGTITLCSK 240


>gi|182417259|ref|ZP_02948612.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237667395|ref|ZP_04527379.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182378905|gb|EDT76418.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237655743|gb|EEP53299.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 364

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 4/181 (2%)

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPS 115
           T  +++  +    ++  I F GGT + I+ +    +L  +A+ +     ++ I +   P 
Sbjct: 66  TVYEYLETIDHSNAVVEISFFGGTFTGIKEEKQKELLQ-VAREFKDKGFIDKIRLSTRPD 124

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
            +        ++  V+ I LGVQSL E+ L   GR H+  +   A  L +     +   +
Sbjct: 125 YINQYILSYLKEYRVDIIELGVQSLNEEILLKAGRGHDVEDVSKASKLIKEYGFILGHQI 184

Query: 176 IYALPKQTMTQWEMELQRA-LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +  LP     + ++E  +A +    D   +Y     +GT    M+K GD V  +   AV+
Sbjct: 185 MPGLPGDDF-KTDIETTKASIEMKPDICRIYPALTIRGTAMEIMYKRGDYVPYTLEEAVE 243

Query: 235 L 235
           +
Sbjct: 244 I 244


>gi|332983460|ref|YP_004464901.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332701138|gb|AEE98079.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
          Length = 586

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 6/142 (4%)

Query: 132 RISLGVQSLEEQSLRFLGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           +  +G+QS+ E SL+ +GR+   H  +  +A +    NI   +  DLI  LP +  + + 
Sbjct: 283 QFEIGIQSVNESSLKTVGRHTDLHRMAHVVAILARRGNI--HLHLDLIAGLPNEDFSSFG 340

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                A     D L L  L + KG+    M +              L+N + S  +   L
Sbjct: 341 RSFDYAYGLRPDVLQLGFLKLLKGSELRNMAEQFGYAYDDRPPYEVLFNDSISFDALCEL 400

Query: 249 HAYE-ISNHSFLGAESLHNLNY 269
           H  E + N  +     +H LNY
Sbjct: 401 HWVEDVLNKYYNSGRLVHTLNY 422


>gi|258620899|ref|ZP_05715933.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586287|gb|EEW11002.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 312

 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 49/103 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  + +L+ + R H+ +        AR +  ++   LI  LP +  ++    LQ
Sbjct: 142 LELGLQTAHDHTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRSENMSTLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 202 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLAVLEQDEYVSI 244


>gi|124088812|ref|XP_001347245.1| Histone acetyltransferase [Paramecium tetraurelia strain d4-2]
 gi|145473991|ref|XP_001423018.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057634|emb|CAH03619.1| Histone acetyltransferase, putative [Paramecium tetraurelia]
 gi|124390078|emb|CAK55620.1| unnamed protein product [Paramecium tetraurelia]
          Length = 551

 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           S  + ITIE  P   + ++       G  RI +GVQS+ E   R   R H          
Sbjct: 216 SKCIGITIETRPDFCQKSHLSDMLLYGCTRIEVGVQSIYEDIARDTNRGHTVESVKKCFA 275

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKM 218
           ++++   ++   ++  LP   + + ++E  +       +  D L +Y   + +GT  Y++
Sbjct: 276 MSKDSGYKVVTHMMPDLPNMGV-ERDLESFKEFFENPDFRPDGLKIYPTLVIRGTGLYEL 334

Query: 219 HKDG 222
            K+G
Sbjct: 335 WKNG 338


>gi|258623853|ref|ZP_05718807.1| Predicted Fe-S oxidoreductase [Vibrio mimicus VM603]
 gi|262166425|ref|ZP_06034162.1| hypothetical protein VMA_002881 [Vibrio mimicus VM223]
 gi|262170673|ref|ZP_06038351.1| hypothetical protein VII_001485 [Vibrio mimicus MB-451]
 gi|258583842|gb|EEW08637.1| Predicted Fe-S oxidoreductase [Vibrio mimicus VM603]
 gi|261891749|gb|EEY37735.1| hypothetical protein VII_001485 [Vibrio mimicus MB-451]
 gi|262026141|gb|EEY44809.1| hypothetical protein VMA_002881 [Vibrio mimicus VM223]
          Length = 312

 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 49/103 (47%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q+  + +L+ + R H+ +        AR +  ++   LI  LP +  ++    LQ
Sbjct: 142 LELGLQTAHDHTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRSENMSTLQ 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + L    D + L+ L I +G+   K  + G L +  ++  V +
Sbjct: 202 QVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLAVLEQDEYVSI 244


>gi|189426106|ref|YP_001953283.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422365|gb|ACD96763.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 518

 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 8/118 (6%)

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           W   S VE        +++       R+AG   + LGV+S     L+ LG+     + + 
Sbjct: 269 WNCQSRVE--------AIDCETLAWMRRAGCECVQLGVESGSSAMLKLLGKRITPEQVVE 320

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           A  L R    ++S  LI  +P+++    +  +        D L +  L    GT  ++
Sbjct: 321 AADLIRQSGMQLSVYLITGIPEESDADRQQTINLIKRIQPDDLQVAPLAYYPGTALFE 378


>gi|154334765|ref|XP_001563629.1| histone acethyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060651|emb|CAM37664.1| histone acetyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 760

 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 36/75 (48%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++        R+ G  R+ LGVQ  +++ L  + R     + + AI L +
Sbjct: 312 IGVTLETRPDTINPAMLVELRRFGCTRVQLGVQHTDDRILTLVNRQSTREDTVNAIKLLK 371

Query: 166 NIFPRMSFDLIYALP 180
           +   ++   L+  LP
Sbjct: 372 DSCFKVDIHLMPDLP 386


>gi|316976239|gb|EFV59566.1| probable elongator complex protein 3 [Trichinella spiralis]
          Length = 565

 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +G+QS+ E   R   R H       A   A+
Sbjct: 231 IGITIETRPDYCLQRHLSQMLSYGCTRLEIGLQSIYEHVARDTNRGHTVKAVCEAFRYAK 290

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+  EL     +  D L +Y   + +GT  Y++ K 
Sbjct: 291 DAGFKVVAHMMPNLPNVSYEEDLHQFR-ELFENPDFRPDGLKIYPTLVIRGTGIYELWKR 349

Query: 222 G 222
           G
Sbjct: 350 G 350


>gi|146185746|ref|XP_001032426.2| histone acetyltransferase, ELP3 family protein [Tetrahymena
           thermophila]
 gi|146143111|gb|EAR84763.2| histone acetyltransferase, ELP3 family protein [Tetrahymena
           thermophila SB210]
          Length = 582

 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  RI +GVQS+ E   R   R H          L++
Sbjct: 244 IGITIETRPDFCYQPHLSDMLLYGCTRIEVGVQSIYEDVARDTNRGHTIEAVKKCFRLSK 303

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   L+  LP   + + ++E  +       +  D L +Y   + +GT  Y++ K+
Sbjct: 304 DAGFKVVSHLMPDLPNMGI-ERDLESFKEFFENPDFRTDGLKIYPTLVIRGTGLYELWKN 362

Query: 222 G 222
           G
Sbjct: 363 G 363


>gi|224119572|ref|XP_002318107.1| histone acetyltransferase [Populus trichocarpa]
 gi|222858780|gb|EEE96327.1| histone acetyltransferase [Populus trichocarpa]
          Length = 563

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 5/124 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       
Sbjct: 229 TKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFC 288

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL----SYAVDHLSLYQLTIEKGTLFYKM 218
           LA++   ++   ++  LP     + ++E  R      S+  D L +Y   + +GT  Y++
Sbjct: 289 LAKDAGFKVVAHMMPDLP-NVGVERDLESFREFFESPSFRADGLKIYPTLVIRGTGLYEL 347

Query: 219 HKDG 222
            K G
Sbjct: 348 WKTG 351


>gi|319952447|ref|YP_004163714.1| tRNA-i(6)a37 thiotransferase enzyme miab [Cellulophaga algicola DSM
           14237]
 gi|319421107|gb|ADV48216.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cellulophaga algicola DSM
           14237]
          Length = 480

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 31/217 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C     V  +  G+E     QS L E+Q +         L G    S +++GG
Sbjct: 178 CDNMCTFC-----VVPFTRGRERSREPQSILKEIQDLHDSNFKEVTLLGQNVDSYLWYGG 232

Query: 79  GTPSLIEPQ---------NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKA 128
           G     E           N + +LD +AK +     + I    +NP  + ++  +   K 
Sbjct: 233 GLKKEFEKATDMQKATAVNFSSLLDTVAKKF---PKMRIRFSTSNPQDMTLDVIETVAKH 289

Query: 129 G--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTM 184
               N I L VQS   + L+ + R H   E I  I   R I P   +S D+I   P +T 
Sbjct: 290 KNICNHIHLPVQSGSNRILKEMNRLHTIEEYITLIDNIRRILPDCAISQDMISGFPTETE 349

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
              +  +        D   +Y  +   GT+  +  +D
Sbjct: 350 EDHQATIDVLKRVQYDFGYMYSYSERPGTMAARKLED 386


>gi|294793531|ref|ZP_06758668.1| radical SAM domain protein [Veillonella sp. 3_1_44]
 gi|294455101|gb|EFG23473.1| radical SAM domain protein [Veillonella sp. 3_1_44]
          Length = 394

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 9/171 (5%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I     P +V        +  GV  + LGVQS+ +  L    R H A E + A+   ++ 
Sbjct: 90  IRCSTRPDAVGDEAITLLQSYGVKTVELGVQSMNDGILVDAKRGHTAQEVVEAVTRLKHR 149

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAV---DHLSLYQLTIEKGTLFYKMHKDGDL 224
              +   L+  L  +T   W+  ++ A++ A    D + +Y + + + T   + ++ G+ 
Sbjct: 150 DMTVGVQLLPGLKGET---WQTIIETAIAVAALRPDFVRIYPVLVIENTELAEQYRAGEY 206

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
              S  +A+   +  +     HG+   E+        E L + N    G Y
Sbjct: 207 KPLSTELAIQYCSFLKDWFEQHGI---EVIRTGLQSTEELDSRNSLVAGPY 254


>gi|57641509|ref|YP_183987.1| histone acetyltransferase Elp3-like protein [Thermococcus
           kodakarensis KOD1]
 gi|57159833|dbj|BAD85763.1| histone acetyltransferase Elp3 homolog [Thermococcus kodakarensis
           KOD1]
          Length = 595

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 92/243 (37%), Gaps = 12/243 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P            K G  R+ LGVQ++         R H   E I A  L R
Sbjct: 243 VGLTIETRPDWAFERQIDRMLKLGTTRVELGVQTVFNFIHERTKRGHGVEEIIKATQLLR 302

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     ++      +  D L +Y   +      Y  +K G
Sbjct: 303 DAGLKINYHIMPGLPGSNFERDLYTFRKIFEDPRFRPDMLKIYPTLVTADAPLYAWYKAG 362

Query: 223 DLVLPSENVAVDL----YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI-- 276
                +   AV+L    Y L         +   +I     +      NL    + + I  
Sbjct: 363 KYRPYTTEEAVELLVEAYKLFPKWVRVMRIQR-DIPAKLIVAGVKHSNLGQLVFNELIKR 421

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           GI P      +VG       ++   E  +K++R++  A   +E FLS E   ++ L+  +
Sbjct: 422 GIRPREIRFREVGHMMQKFGVQPEVEH-IKLLREDYDAAGGREIFLSFEDVKNDILIGFI 480

Query: 336 RLR 338
           RLR
Sbjct: 481 RLR 483


>gi|110834795|ref|YP_693654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alcanivorax
           borkumensis SK2]
 gi|123345402|sp|Q0VN66|MIAB_ALCBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|110647906|emb|CAL17382.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 445

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 28/230 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSIS----------SIF 75
           C K C +C     V  Y  G+E    +Q  L E+Q +  + G R ++           + 
Sbjct: 157 CSKYCTFC-----VVPYTRGEEVSRPVQPVLKEIQHLADM-GVREVNLLGQNVNAYQGVG 210

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             G T  L +   +   +DGI +  +T S  VE       S   +  ++   +  V+ + 
Sbjct: 211 ADGDTLDLADLIRLIRDIDGIDRIRYTTSHPVEF------SEALIQVYEDVPEL-VSHLH 263

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L VQS  ++ L  + RNH   E  + +   + I P +SF  D I   P +T   +E  + 
Sbjct: 264 LPVQSGSDRILAMMKRNHMVLEYKSKLRKLKRIRPDISFSSDFIIGFPGETDRDFEDTMN 323

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                  D    +  +   GT    +  D D+ +  + +A+    + Q++
Sbjct: 324 LIHDIGFDMSFSFIYSARPGTPAADLPDDVDMEVKKQRLAILQQRINQNV 373


>gi|317485155|ref|ZP_07944037.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
 gi|316923690|gb|EFV44894.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
          Length = 472

 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C+  C YC +   N H+ R K+ QE+ ++  +T +Q M    G + ++      G   L
Sbjct: 95  YCINSCSYCPYHAKNKHIARKKLTQEDIVRE-VTALQDM----GHKRLA---IESGEDPL 146

Query: 84  IEPQNIALILDGIAKNWTVS-SNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
             P  I  IL+ I   ++V   N  I  +  N ++  V N++  + AG+    L  ++  
Sbjct: 147 NNP--IEYILESIRTIYSVKHRNGSIRRVNVNIAATTVENYRKLKDAGIGTYILFQETYH 204

Query: 142 EQSLRFL---GRNHN 153
           +QS   L   G  HN
Sbjct: 205 KQSYEKLHPAGPKHN 219


>gi|158319763|ref|YP_001512270.1| putative radical SAM protein [Alkaliphilus oremlandii OhILAs]
 gi|158139962|gb|ABW18274.1| conserved hypothetical radical SAM protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 318

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 14/181 (7%)

Query: 106 VEITIEANPSSVEVNNFQGY----RKAGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           VEI I   P  +     +       + G+N  I LG+QS+   SL+ + R H   E + A
Sbjct: 115 VEIAISTRPDCIREEYLEFLSDLRERTGLNISIELGLQSVNYHSLKKINRGHTLGEYLDA 174

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +   +     +   LI  LP   M       +   +  +D + L+ L I + T+  + +K
Sbjct: 175 VLSIKKYGFSICTHLILNLPWDNMDDVIENAKIMSALKMDQIKLHALYIMENTIMGEQYK 234

Query: 221 DGDLVLPS-----ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
            G++ + S     E V   L +L+  +     +     +N  F+      N+++W+  D 
Sbjct: 235 RGEIEIASVEEYKERVITFLEHLSPDVVVQRIIGRAPKANSLFVNW----NMSWWKIRDE 290

Query: 276 I 276
           I
Sbjct: 291 I 291


>gi|134045128|ref|YP_001096614.1| radical SAM family protein [Methanococcus maripaludis C5]
 gi|132662753|gb|ABO34399.1| conserved hypothetical radical SAM protein [Methanococcus
           maripaludis C5]
          Length = 332

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGV 130
           ++F  GT +   P+ +  + D      +    + I+I   P  +E   ++  + Y K G 
Sbjct: 110 VYFYPGTNTHGTPERLKELWDYAL---SFEDVIGISIGTRPDCLEDEKLDILENYVKQGY 166

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              I LG+Q++ +++L FL R H++++    +   +     +   +I  LP ++     M
Sbjct: 167 EIWIDLGIQTMHDKTLDFLNRKHSSNDIRRVLIECKKRGILVCGHIILGLPDESWNMM-M 225

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           E  + LS   +D L +Y L + + T   +++  G+
Sbjct: 226 ETSKMLSDLEIDALKIYPLVVIENTELEEIYWKGE 260


>gi|300707739|ref|XP_002996066.1| hypothetical protein NCER_100896 [Nosema ceranae BRL01]
 gi|239605330|gb|EEQ82395.1| hypothetical protein NCER_100896 [Nosema ceranae BRL01]
          Length = 559

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 9/119 (7%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P     ++       G  RI +GVQS+ E   R   R H       +  + +
Sbjct: 204 VGITIETRPDYCAKSHLDKMLAYGCTRIEIGVQSVYEDVARDTNRGHTVEAVCQSFCMTK 263

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKM 218
           +   ++   ++  LP      W+ +L +   Y        D L +Y   + +GT  Y++
Sbjct: 264 DAGYKIVSHMMPNLPN---VGWKRDLAQFREYFDNPRFRSDGLKIYPTLVIRGTGLYEL 319


>gi|167037376|ref|YP_001664954.1| radical SAM domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040044|ref|YP_001663029.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
 gi|256752913|ref|ZP_05493747.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914128|ref|ZP_07131444.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307724636|ref|YP_003904387.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|320115790|ref|YP_004185949.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166854284|gb|ABY92693.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|166856210|gb|ABY94618.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256748210|gb|EEU61280.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889063|gb|EFK84209.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307581697|gb|ADN55096.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
 gi|319928881|gb|ADV79566.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 562

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 111 EANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           E NP  V+   +   +G  K    +  +GVQ+  + SL+ + R     +A+  I L R  
Sbjct: 252 EVNPELVDKEFIEELKGLEKRI--QFEVGVQTTNKNSLKKISRITAVEKALRGIKLLREA 309

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             ++  DLI  LP+ +   +        +   D + L  L + KGT
Sbjct: 310 GIKLHVDLIAGLPEDSFETFSKAFDDVYNLKPDEIQLGFLKVLKGT 355


>gi|282882431|ref|ZP_06291058.1| radical SAM protein, family [Peptoniphilus lacrimalis 315-B]
 gi|300813773|ref|ZP_07094083.1| radical SAM protein, TIGR01212 family [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|281297751|gb|EFA90220.1| radical SAM protein, family [Peptoniphilus lacrimalis 315-B]
 gi|300512116|gb|EFK39306.1| radical SAM protein, TIGR01212 family [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 299

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+Q++   +L+ + R H  ++ I  +  A+    R+   ++  LP      W+ +L 
Sbjct: 138 LEIGLQTVNYHTLKIINRGHGLADFIDGVLRAKKHGLRVCVHVLIGLP------WDDDLD 191

Query: 193 -----RALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                + LS  +VD + ++ L I K TL  K+++DG +
Sbjct: 192 VYECAKILSALSVDEVKIHALYIVKNTLMGKLYEDGKI 229


>gi|322418301|ref|YP_004197524.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. M18]
 gi|320124688|gb|ADW12248.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. M18]
          Length = 473

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 48/254 (18%), Positives = 107/254 (42%), Gaps = 36/254 (14%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C YC     F+    R +  Q  +      E++W+++      +  I F   T + 
Sbjct: 206 CPSRCIYCLWPQTFSGRTLRKRSPQNVY-----EEVRWIKENLP--QVKDISFDDDTFTA 258

Query: 84  IEPQNIAL--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
            +   IA+  ++  +  +W +++          ++ +    +  R AG++ + +G +S  
Sbjct: 259 DKQHAIAIARLIKPLNVSWVINAR---------ANADYETLKELRDAGMHHVVVGYESGN 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD- 200
           EQ L+ + +    ++AI      + +   +    +  LP +T       ++  ++YA+D 
Sbjct: 310 EQILKNIKKGVTKTQAIEFTRNCKKLGITVHGAFVLGLPGETRET----IKETIAYAIDL 365

Query: 201 HLSLYQLTIE---KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            L+  Q+++     GT FY+M K+   +  + +  +D     + + +   L   EI    
Sbjct: 366 DLTSIQVSLASPYPGTEFYQMAKENGWI--ASDSFLDATGHQKCVINYPDLSNQEI---- 419

Query: 258 FLGAESLHNLNYWR 271
           F   E  +N  Y+R
Sbjct: 420 FDAVEQFYNKFYFR 433


>gi|294791673|ref|ZP_06756821.1| radical SAM domain protein [Veillonella sp. 6_1_27]
 gi|294456903|gb|EFG25265.1| radical SAM domain protein [Veillonella sp. 6_1_27]
          Length = 391

 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 9/171 (5%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I     P +V        +  GV  + LGVQS+ +  L    R H A E + A+   ++ 
Sbjct: 90  IRCSTRPDAVGDEAITLLQSYGVKTVELGVQSMNDGILVDAKRGHTAQEVVEAVTRLKHR 149

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAV---DHLSLYQLTIEKGTLFYKMHKDGDL 224
              +   L+  L  +T   W+  ++ A++ A    D + +Y + + + T     ++ G+ 
Sbjct: 150 DMTVGVQLLPGLKGET---WQTIIETAIAVAALRPDFVRIYPVLVIENTELADQYRAGEY 206

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
              S  +A+   +  +     HG+   E+        E L + N    G Y
Sbjct: 207 EPLSTELAIQYCSFLKDWFEQHGI---EVIRTGLQSTEELDSGNSLVAGPY 254


>gi|212640263|ref|YP_002316783.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
 gi|212561743|gb|ACJ34798.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
          Length = 501

 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/162 (19%), Positives = 70/162 (43%), Gaps = 17/162 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD     + +K  +   ++    ++++  ++     +  I F  GT +L   +
Sbjct: 201 CPFSCTFCD-----QGHKAYRSLTMERIKEDLEFFAKI----KVKHIDFLDGTFNLNPKR 251

Query: 88  NIALI--LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            I L+  L  +  +W+  +      E  P ++ V+      KA    + LG+QS+  Q+L
Sbjct: 252 TIELLNYLINLNTDWSFHA------EIKPENLTVDEINLMAKAKFQTVELGLQSIHPQTL 305

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           +++ R +  S     I+    +   +  + I  LP +++  W
Sbjct: 306 KYIKRRNRFSVIEKNINHLLEVGISIVINTIIGLPGESLKDW 347


>gi|322815520|gb|EFZ24162.1| acetyltransferase, putative [Trypanosoma cruzi]
          Length = 669

 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + +T+E  P  +  +  + +R  GV R+ LGVQ L++  L  + R    ++ I  I
Sbjct: 299 IGVTVETRPDYINASELRRFRCLGVTRVQLGVQHLDDDILTIVNRECPTAKTILGI 354


>gi|152991288|ref|YP_001357010.1| hypothetical protein NIS_1546 [Nitratiruptor sp. SB155-2]
 gi|151423149|dbj|BAF70653.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 315

 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/81 (20%), Positives = 44/81 (54%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS+ +++L+ + R H+A+     I  ++    ++   +I+ LP +T       ++
Sbjct: 160 IEYGIQSIFDETLQKINRGHDAANVEEWIRKSKEKGLKVCGHVIFGLPDETPDMMLQTVK 219

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
           +++ + +D + ++ L + K T
Sbjct: 220 KSIEWGIDSIKIHPLYVVKNT 240


>gi|71652696|ref|XP_814999.1| acetyltransferase [Trypanosoma cruzi strain CL Brener]
 gi|70880021|gb|EAN93148.1| acetyltransferase, putative [Trypanosoma cruzi]
          Length = 669

 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + +T+E  P  +  +  + +R  GV R+ LGVQ L++  L  + R    ++ I  I
Sbjct: 299 IGVTVETRPDYINASELRRFRCLGVTRVQLGVQHLDDDILTIVNRECPTAKTILGI 354


>gi|288556902|ref|YP_003428837.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           pseudofirmus OF4]
 gi|288548062|gb|ADC51945.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           pseudofirmus OF4]
          Length = 541

 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 2/105 (1%)

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
           V  I L VQ      L+ + R +   + +   H  +   P+ SF  DLI   P +T  Q+
Sbjct: 353 VEHIHLPVQHGNSDILKLMARKYTREQYVELAHKIKMAIPKASFTTDLIVGFPNETEEQF 412

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           E  L        D    Y  +  +GT   KM  +  + +  E +A
Sbjct: 413 EDTLSLVREIEFDSAFTYIYSPREGTPAAKMKDNVPMEVKKERLA 457


>gi|269797767|ref|YP_003311667.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269094396|gb|ACZ24387.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 399

 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 9/171 (5%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I     P +V        +  GV  + LGVQS+ +  L    R H A E + A+   ++ 
Sbjct: 95  IRCSTRPDAVGDEAITLLQSYGVKTVELGVQSMNDGILVDAKRGHTAQEVVEAVTRLKHR 154

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAV---DHLSLYQLTIEKGTLFYKMHKDGDL 224
              +   L+  L  +T   W+  ++ A++ A    D + +Y + + + T   + ++ G+ 
Sbjct: 155 DMTVGVQLLPGLKGET---WQTIIETAIAVAALRPDFVRIYPVLVIENTELAEQYRAGEY 211

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
              S  +A+   +  +     HG+   E+        E L + N    G Y
Sbjct: 212 KPLSTELAIQYCSFLKDWFEQHGI---EVIRTGLQSTEELDSGNSLVAGPY 259


>gi|325959709|ref|YP_004291175.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325331141|gb|ADZ10203.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 476

 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 44/100 (44%)

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+N I  GV+S  ++ L  + +  N  +A  A+  A+N    +    I   P +T  
Sbjct: 292 KNAGMNTIYYGVESGSQRILNLMKKGINLKQAENAVKNAKNAGLEVLTSYIIGYPGETQN 351

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                ++ ++    D+     LT   GT  Y   KD DL+
Sbjct: 352 DMNETIKFSIKLEPDYCQYSILTPFPGTPIYHDLKDKDLI 391


>gi|125973447|ref|YP_001037357.1| radical SAM family protein [Clostridium thermocellum ATCC 27405]
 gi|256005343|ref|ZP_05430308.1| Radical SAM domain protein [Clostridium thermocellum DSM 2360]
 gi|281417647|ref|ZP_06248667.1| Radical SAM domain protein [Clostridium thermocellum JW20]
 gi|125713672|gb|ABN52164.1| Radical SAM [Clostridium thermocellum ATCC 27405]
 gi|255990662|gb|EEU00779.1| Radical SAM domain protein [Clostridium thermocellum DSM 2360]
 gi|281409049|gb|EFB39307.1| Radical SAM domain protein [Clostridium thermocellum JW20]
 gi|316940316|gb|ADU74350.1| Radical SAM domain protein [Clostridium thermocellum DSM 1313]
          Length = 338

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 7/219 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFF 76
           + +++    C   C YC+     ++Y  GQ++ +  +  ++ ++         +   I F
Sbjct: 8   IPIFIPHKGCPFDCIYCN-----QKYISGQKDDMTEEKMISIIESHIDSACEDTYIEIGF 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + IE +     L+   +         I +   P  +         K  V  I LG
Sbjct: 63  YGGSFTGIEREEQYRYLETANRYIKEGKVKSIRLSTRPDYINEEILDYLEKYSVKTIELG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+ + L    R H+  +   A  L +     +    +  LP  +  +     +  + 
Sbjct: 123 VQSLDREVLEKSCRGHSVEDVYNASALIKKRGFVLGIQTMIGLPGDSRKKALHTAEEVVK 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
              D L +Y   + +GT   KM+  G+        AV+L
Sbjct: 183 IKPDILRIYPTLVVRGTYLEKMYIKGEYTPLELEEAVEL 221


>gi|51891491|ref|YP_074182.1| biotin synthase [Symbiobacterium thermophilum IAM 14863]
 gi|51855180|dbj|BAD39338.1| putative biotin synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 350

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 40/204 (19%), Positives = 79/204 (38%), Gaps = 27/204 (13%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
            + G G +  G+      C   C YC     N HVRRY++  E  + +   +  W     
Sbjct: 48  RVMGDGVHLRGLIEFSNICRMDCCYCGIRRSNRHVRRYRMTPEEIVAA--AQGAWR---- 101

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                 S+    G    ++P+ +A    G+ +    ++ + +T+     + E   +  +R
Sbjct: 102 --LGYGSVVLQSGEGDALDPEELA----GVVRQIKATTPLAVTLSVGERTRE--EYALWR 153

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           +AG +R  L  ++ + +    L       + I  +   R +  ++    +  LP QT+  
Sbjct: 154 EAGADRFLLRHETADPELFARLRPGRRLEQRIQCLLWLRELGYQVGSGFMVGLPGQTVG- 212

Query: 187 WEMELQRALSYAVDHLSLYQLTIE 210
                    + A D L L +L +E
Sbjct: 213 ---------TLADDILLLKRLNVE 227


>gi|150015191|ref|YP_001307445.1| biotin synthase [Clostridium beijerinckii NCIMB 8052]
 gi|149901656|gb|ABR32489.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 348

 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 25/176 (14%)

Query: 19  LGVYVHW-------PFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           LG YVH          C + C YC     N ++ RY++ +E  +      + +       
Sbjct: 44  LGEYVHLRGLIEFTNICKRNCLYCGLRRDNKNLERYRLTEEEILDFAKKAVSY------- 96

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               ++   GG       + +  I+  I K      NV +T+     + E   ++ +++A
Sbjct: 97  -GYKTLVLQGGEDDYFTKERMTNIVKEIKK-----LNVALTLSLGEKTYE--EYKAFKEA 148

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           G +R  + +++ +++    +  N +  E +  +   R++   +   ++  LP QT+
Sbjct: 149 GADRYLIRIETTDKKLYEDMDPNMSFEERLNCLKNLRDLGYEVGSGILVGLPNQTL 204


>gi|169334638|ref|ZP_02861831.1| hypothetical protein ANASTE_01041 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257376|gb|EDS71342.1| hypothetical protein ANASTE_01041 [Anaerofustis stercorihominis DSM
           17244]
          Length = 315

 Score = 36.6 bits (83), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQSLRFLGRNHNAS 155
           V + V I+I   P  ++  ++  + K   N       I LG+QS+  ++L+ L R H  +
Sbjct: 107 VDNAVAISISTRPDCID-GDYLDFLKEVENMYHLDIIIELGLQSVNNETLKKLNRGHTLA 165

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQLTIEKGTL 214
           + + A  L ++    +   +I ++P        +E  + LS    + + ++ L IEK T+
Sbjct: 166 DYLKAALLIKSYDFEICTHIIASIPYDRDEDL-VEAAKILSILNTNSVKIHSLYIEKNTI 224

Query: 215 FYKMHKDGDL 224
             KM+++G +
Sbjct: 225 LGKMYEEGKI 234


>gi|169350333|ref|ZP_02867271.1| hypothetical protein CLOSPI_01094 [Clostridium spiroforme DSM 1552]
 gi|169293116|gb|EDS75249.1| hypothetical protein CLOSPI_01094 [Clostridium spiroforme DSM 1552]
          Length = 313

 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 26/134 (19%), Positives = 62/134 (46%), Gaps = 5/134 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           V I+I   P  +E ++   Y  +   R    I LG+Q++ +++ + + R H+  E I  +
Sbjct: 121 VAISIATRPDCLE-DDILKYLDSVNKRCDLWIELGLQTIHDKTAKLINRGHSYLEFINGL 179

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +  R +   +   +I  LP +T       ++      +  L ++ L + K T   +++++
Sbjct: 180 NKLRQLNINVCVHIINGLPFETHEMMLTTVKEIGKLDIQALKIHMLYVIKNTKLNQIYQN 239

Query: 222 GDLVLPSENVAVDL 235
            +  + + +  +DL
Sbjct: 240 NEFTMLTRDEYIDL 253


>gi|326389821|ref|ZP_08211385.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325994089|gb|EGD52517.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 562

 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 111 EANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           E NP  V+   +   +G  K    +  +GVQ+  + SL+ + R     +A+  I L R  
Sbjct: 252 EVNPELVDEEFIEELKGLEKRI--QFEVGVQTTNKNSLKKISRITAVEKALRGIKLLREA 309

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             ++  DLI  LP+ +   +        +   D + L  L + KGT
Sbjct: 310 GIKLHVDLIAGLPEDSFGTFSKAFDDVYNLKPDEIQLGFLKVLKGT 355


>gi|296271992|ref|YP_003654623.1| hypothetical protein Arnit_0452 [Arcobacter nitrofigilis DSM 7299]
 gi|296096167|gb|ADG92117.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
          Length = 333

 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 45/102 (44%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS  +++L  + R   ++     I  ++     +   LIY LP +T       L+
Sbjct: 178 IEYGIQSFYDETLEKINRGDTSANIKKWIKKSKEKGLNVCGHLIYGLPNETQEMMFETLR 237

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + +   +D +  + L + K TL    +K G     SE + +D
Sbjct: 238 QTIELDIDSIKFHPLYVVKNTLLTNEYKKGRFTPISEELYID 279


>gi|308271415|emb|CBX28023.1| hypothetical protein N47_G33470 [uncultured Desulfobacterium sp.]
          Length = 372

 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 11/167 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRSISS 73
           + V+V    C  +C +C+ N+     K        +N I++FL      R     R+   
Sbjct: 32  IPVFVPHAGCPHQCIFCNQNTVTGEKKSIPSQKELDNIIETFL------RYKGDNRNRVQ 85

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I F GG    I+   I  +L    K  T      I     P +++ +         V  I
Sbjct: 86  IAFYGGNFLGIDDGKIKQLLVAATKYVTDGLVDSIRFSTRPDTIDDHKLGCIESFPVRTI 145

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            LGVQS+ +  L    R H  S+ I A+ L +         ++  LP
Sbjct: 146 ELGVQSMVDSVLLLSKRGHTNSDTINAVGLLKKRNFETGLQMMIGLP 192


>gi|94986835|ref|YP_594768.1| Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731084|emb|CAJ54447.1| predicted Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00]
          Length = 298

 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 48/103 (46%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  GVQSL +++L  + R H++  +  AI  A N   ++   +++ LP +T T     + 
Sbjct: 141 VEFGVQSLHDETLIKIKRGHSSKCSEQAIIQAANAGLQVCAHVMFGLPGETPTHMLQTID 200

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           R  S  +  +  + + + K T+  K    G+    +E    DL
Sbjct: 201 RLNSLPIHGIKFHNVYVCKNTILEKEFNAGNYYPLTEADYSDL 243


>gi|307265878|ref|ZP_07547428.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919153|gb|EFN49377.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 562

 Score = 36.6 bits (83), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)

Query: 111 EANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           E NP  V+   +   +G  K    +  +GVQ+  + SL+ + R     +A+  I L R  
Sbjct: 252 EVNPELVDEEFIEELKGLEKRI--QFEVGVQTTNKNSLKKISRITAVEKALRGIKLLREA 309

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             ++  DLI  LP+ +   +        +   D + L  L + KGT
Sbjct: 310 GIKLHVDLIAGLPEDSFGTFSKAFDDVYNLKPDEIQLGFLKVLKGT 355


>gi|304314970|ref|YP_003850117.1| histone acetyltransferase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588429|gb|ADL58804.1| predicted histone acetyltransferase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 348

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 10/136 (7%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +T E  P      +       GV R+ LGVQ++     + + R H+  + I +  + R
Sbjct: 16  VGMTFETRPDYCREEDVDRMLNLGVTRVELGVQTIYNYIYQRIRRGHSIGDVIESNRILR 75

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +   +++  L+  L     + ++ +L+      +  S+  D L +Y   + +G+  Y + 
Sbjct: 76  DSGIKVAMHLMPGL----FSDFDRDLRIFRRIFQDPSFRPDMLKIYPCLVTRGSELYSLW 131

Query: 220 KDGDLVLPSENVAVDL 235
           ++G     S   AVDL
Sbjct: 132 ENGLYKPYSTEEAVDL 147


>gi|302840225|ref|XP_002951668.1| hypothetical protein VOLCADRAFT_61745 [Volvox carteri f.
           nagariensis]
 gi|300262916|gb|EFJ47119.1| hypothetical protein VOLCADRAFT_61745 [Volvox carteri f.
           nagariensis]
          Length = 600

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 9/126 (7%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  + +TIE  P     ++       G  R+ +G+QS+ E   R   R H          
Sbjct: 202 TKCIGLTIETRPDYCARSHLTDMLSYGCTRLEIGLQSIYEDVARDTNRGHTVEAVKQCFV 261

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQ------RALSYAVDHLSLYQLTIEKGTLFY 216
            A++   ++   +++ +P      WE +++          +  D L LY   + +GT  Y
Sbjct: 262 GAKDAGFKV---VVHMMPDLPGVGWERDIECFREFFENPDFRTDGLKLYPTLVIRGTGLY 318

Query: 217 KMHKDG 222
           ++ K G
Sbjct: 319 ELWKRG 324


>gi|293374331|ref|ZP_06620658.1| radical SAM protein, TIGR01212 family [Turicibacter sanguinis
           PC909]
 gi|325841263|ref|ZP_08167364.1| radical SAM protein, TIGR01212 family [Turicibacter sp. HGF1]
 gi|292646994|gb|EFF64977.1| radical SAM protein, TIGR01212 family [Turicibacter sanguinis
           PC909]
 gi|325489944|gb|EGC92291.1| radical SAM protein, TIGR01212 family [Turicibacter sp. HGF1]
          Length = 317

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++ +Q+ + + R H+    +  +   R     +   +I  LP +T    EM L+
Sbjct: 153 VELGLQTMHDQTGKLINRGHDFKTLVEGVEKLRKHNIDVIIHIINGLPGETR---EMMLE 209

Query: 193 RALSYA---VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            A + A   V  + ++ L +  GT  +KM   G L L  ++  +DL
Sbjct: 210 TAKAVAKLDVQGIKIHLLHVIDGTPMHKMLDKGMLQLMDKDEYIDL 255


>gi|330828821|ref|YP_004391773.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
 gi|328803957|gb|AEB49156.1| MotA/TolQ/ExbB proton channel [Aeromonas veronii B565]
          Length = 245

 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL-RLREGISVKDWEMLAGRNLDIECER 360
           +SW    R+ G   +E +   +E + D F   GL  + +G+S +D  ML   ++DIE ER
Sbjct: 79  QSWAVFARQQGLLALENQ---AEHEEDNFTRQGLGMIVDGVSTEDIRMLLEADIDIEQER 135

Query: 361 N 361
           N
Sbjct: 136 N 136


>gi|227499595|ref|ZP_03929702.1| conserved hypothetical radical SAM protein [Anaerococcus tetradius
           ATCC 35098]
 gi|227218354|gb|EEI83608.1| conserved hypothetical radical SAM protein [Anaerococcus tetradius
           ATCC 35098]
          Length = 323

 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 126 RKAGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           +K G++    LG+Q+   ++L  L R  + ++ IAA  L +    R+   +I +LP   +
Sbjct: 137 QKTGIDITFELGLQTANYKTLDVLNRGESLADFIAACILLKEYKIRICTHVILSLPWDNL 196

Query: 185 TQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
               +E  R ++   V+ + ++ L + K T   KM+++G++ + S+
Sbjct: 197 RDV-IETARIITALGVNEIKIHSLFVVKNTKLSKMYENGEVSMISK 241


>gi|188995048|ref|YP_001929300.1| hypothetical protein PGN_1184 [Porphyromonas gingivalis ATCC 33277]
 gi|188594728|dbj|BAG33703.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 310

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  GV+S  + +LR + R H  S+++AAI         +   LI  LP ++         
Sbjct: 147 VEYGVESTLDATLRRVNRGHLWSDSMAAIERTAKTGLPIGVHLILGLPGESREDILRHAD 206

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDL 235
           +  +  V  L L+QL I +GT   K + +   D    SE   +DL
Sbjct: 207 KISALPVTTLKLHQLQIIRGTAMAKEYAESPSDFHFYSEEEYIDL 251


>gi|116250210|ref|YP_766048.1| vitamin B12 binding methyltransferase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115254858|emb|CAK05932.1| putative vitamin B12 binding methyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 509

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR--NIFPRMSFDLIYALPKQ 182
           YRKAGV R  +G+++ +E +L  + +    +    AI L R  +I    ++  +    ++
Sbjct: 292 YRKAGVVRWLIGMENTDEATLTLIKKGGAKATDREAIRLLRQHDILSMATW--VVGFEEE 349

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           T++      ++ LSY  D +    +T  + T F+++ +D  ++
Sbjct: 350 TLSHLLRGFRQLLSYDPDQIQALYVTPHRWTPFFRIARDRQVI 392


>gi|254442954|ref|ZP_05056430.1| radical SAM protein, TIGR01212 family [Verrucomicrobiae bacterium
           DG1235]
 gi|198257262|gb|EDY81570.1| radical SAM protein, TIGR01212 family [Verrucomicrobiae bacterium
           DG1235]
          Length = 321

 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 3/119 (2%)

Query: 106 VEITIEANPSSVEVNNFQGY-RKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAAIH 162
           V +TI   P  ++    +   R+ G   +S+  G++S+ +  L  + R     E +AA+ 
Sbjct: 133 VGLTIGTRPDCIDREKLEMLKRRFGHLYVSIEYGLESMRDDVLAGINRGTTHEEFVAAVE 192

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           L       +    I+ LP +    W           + H+ L+ L + KG++  K ++D
Sbjct: 193 LTAEYGFEVCAHTIFGLPGEAEGDWLAVADELNRLPIRHVKLHHLHVVKGSILAKRYRD 251


>gi|139438003|ref|ZP_01771556.1| Hypothetical protein COLAER_00543 [Collinsella aerofaciens ATCC
           25986]
 gi|133776200|gb|EBA40020.1| Hypothetical protein COLAER_00543 [Collinsella aerofaciens ATCC
           25986]
          Length = 635

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P +V        R+ G  +I +G+QSL +  L    R  + ++   A  LAR
Sbjct: 304 VGLVIETRPDAVTPQALTLIRRLGCTKIQMGIQSLNQHLLDINERRVSVAQIERAFSLAR 363

Query: 166 ----NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                I      +L+ A P+     +E  +  + ++  D + +Y   + +G+     ++ 
Sbjct: 364 LFGFKIHAHFMLNLLGATPEGDKRDYECFMTES-AFMPDEVKVYPCALIEGSRLVGCYER 422

Query: 222 GDLVLPSENVAVDLYNLTQSITSA 245
           G+    +E   +D+      +T A
Sbjct: 423 GEWRPYTEEELLDVLADDIVVTPA 446


>gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 341

 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 24/116 (20%), Positives = 48/116 (41%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I I   P  ++       +   V  + LG+QS+ +  L    R H A +++ AI L ++ 
Sbjct: 88  IRISTRPDCIDKEILGFLKDYNVKTVELGIQSMFDDVLEASKRGHTAKDSVKAIELIKSF 147

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +   L+  LP  T  +     +    Y  +   +Y   + + T   +M++ G+
Sbjct: 148 DFLLGVQLMVGLPNSTPEKDIKSAEILCRYQPNIARIYPTLVIEDTYLAEMYQKGE 203


>gi|34540822|ref|NP_905301.1| radical SAM family protein [Porphyromonas gingivalis W83]
 gi|34397136|gb|AAQ66200.1| radical SAM protein, TIGR01212 family [Porphyromonas gingivalis
           W83]
          Length = 311

 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  GV+S  + +LR + R H  S+++AAI         +   LI  LP ++         
Sbjct: 148 VEYGVESTLDATLRRVNRGHLWSDSMAAIERTAKTGLPIGVHLILGLPGESREDILRHAD 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDL 235
           +  +  V  L L+QL I +GT   K + +   D    SE   +DL
Sbjct: 208 KISALPVTTLKLHQLQIIRGTAMAKEYAESPSDFHFYSEEEYIDL 252


>gi|313759750|gb|ADR79187.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
          Length = 144

 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R + F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFTQT 60

Query: 191 LQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAH 246
           +   L    + L+L+   ++       K  K+ D+    E  A+  Y    LT++   A 
Sbjct: 61  IADILHMRPNRLALFSFASVPWIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQAI 120

Query: 247 GLHAYEI 253
           GL  + +
Sbjct: 121 GLDHFSL 127


>gi|325971936|ref|YP_004248127.1| radical SAM protein [Spirochaeta sp. Buddy]
 gi|324027174|gb|ADY13933.1| Radical SAM domain protein [Spirochaeta sp. Buddy]
          Length = 548

 Score = 36.2 bits (82), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 37/82 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +   L+   RN N S+    I L          DLI  LP  ++  +   L 
Sbjct: 278 LQIGLQSSDSAVLKAANRNFNPSQFAKKIQLLNQRGIPFGLDLIIGLPHDSLAAFTKSLD 337

Query: 193 RALSYAVDHLSLYQLTIEKGTL 214
            A+     +L ++ L++  GTL
Sbjct: 338 YAMLLKPSNLDIFPLSLLPGTL 359


>gi|302390015|ref|YP_003825836.1| cobalamin B12-binding domain protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200643|gb|ADL08213.1| cobalamin B12-binding domain protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 563

 Score = 36.2 bits (82), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 8/125 (6%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQSLEEQSLRFL 148
           ILD I +   +  N     E NP  V     +G    G+    R  +G+Q+   +SL+ +
Sbjct: 237 ILDIIRR---LGGNTVFHCEINPELVNDRFLKGLE--GIEDRLRFEVGIQTTNPESLKEI 291

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            RN +   A+  I   +    ++  DLI  LP      +            D + L  L 
Sbjct: 292 SRNPDVERALRGIERLKAAGVKLHVDLIAGLPYDDFESFSRAFDDVYRLEPDEIQLGFLK 351

Query: 209 IEKGT 213
           + KGT
Sbjct: 352 LLKGT 356


>gi|290559169|gb|EFD92528.1| histone acetyltransferase, ELP3 family [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 525

 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP-------K 181
           G+ R+ +GVQS+ ++ L    R H  S+ I A    +N   ++ + ++  L        +
Sbjct: 229 GITRVEMGVQSIYDEVLLKNNRGHTISDVIDASRRLKNYGYKVDYHIMLNLAFSDKDKDR 288

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVA 232
           +T+ Q    +    ++  D + LY   + +GT  Y+M K G+    P E+V 
Sbjct: 289 ETINQ----IYNNDNFKPDAIKLYPTLVIRGTGLYEMWKRGNYKPYPIEDVV 336


>gi|149923611|ref|ZP_01912009.1| hypothetical protein PPSIR1_38941 [Plesiocystis pacifica SIR-1]
 gi|149815525|gb|EDM75060.1| hypothetical protein PPSIR1_38941 [Plesiocystis pacifica SIR-1]
          Length = 606

 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 21/109 (19%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD 174
           +++ +      ++AG++ I  G++SL    LR + +   AS+ IA +  AR +  ++ ++
Sbjct: 335 ANITLRKAMALKRAGIDHIQPGIESLSTALLRRMDKGIKASQNIALMRYARAVGLQLVWN 394

Query: 175 LIYALPKQTMTQWE--MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           L+   P      +E  +EL   L++      ++Q++ ++ + ++   ++
Sbjct: 395 LLVRFPGDREEDYEGMIELIPLLAHLRPSAGVHQVSFDRFSPYFSKARE 443


>gi|308802780|ref|XP_003078703.1| ribosomal L9-like protein (ISS) [Ostreococcus tauri]
 gi|116057156|emb|CAL51583.1| ribosomal L9-like protein (ISS) [Ostreococcus tauri]
          Length = 192

 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR----FLGRN-HNASEAIAA 160
           V I IE N + VE+ NF G ++  V ++  GV++  ++S++      G +  N S++ A 
Sbjct: 102 VNIAIEDNGTRVEIRNFLGEKRTRVCQMLEGVKAYRDESVKDCIVMEGNDIDNVSQSAAL 161

Query: 161 IH---LARNIFPRMSFDLIYALPKQTM 184
           IH   L +N   R   D IY   K T+
Sbjct: 162 IHMSCLVKNKDIRKFLDGIYVSEKGTI 188


>gi|198436737|ref|XP_002131669.1| PREDICTED: similar to elongation protein 3 homolog [Ciona
           intestinalis]
          Length = 548

 Score = 36.2 bits (82), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  +A+
Sbjct: 216 IGITIETRPDYCLKKHQSEMLTYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFQIAK 275

Query: 166 NIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +   ++   ++  LP    ++ + Q+ +E     ++  D L +Y   + +GT  Y++ K 
Sbjct: 276 DCGFKVVTHMMPNLPNVRLERDIEQF-VEFFENPAFRPDGLKIYPTLVIRGTGLYELWKT 334

Query: 222 G 222
           G
Sbjct: 335 G 335


>gi|317051787|ref|YP_004112903.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
 gi|316946871|gb|ADU66347.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
          Length = 426

 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEME 190
           + + +QS +++ L  + R++  SEA+  +   ++I P  ++  D+I   P ++   +E  
Sbjct: 248 LHISLQSADDRILALMNRHYRWSEALKVMEQVKSIDPFLKIGTDIIAGFPGESPATFESI 307

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
            QR  S  +D+L ++  +   GT
Sbjct: 308 CQRIESSPLDYLHIFPFSGRPGT 330


>gi|307243935|ref|ZP_07526060.1| radical SAM protein, TIGR01212 family [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492757|gb|EFM64785.1| radical SAM protein, TIGR01212 family [Peptostreptococcus stomatis
           DSM 17678]
          Length = 317

 Score = 36.2 bits (82), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 47/103 (45%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++ +Q+   + R H     +  ++  R+    +   +I  LP +T       ++
Sbjct: 154 VELGLQTVHDQTSNIINRGHGLDVFVDCVNRLRSREIEVVAHVINGLPGETYDMMMETIR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           R     +  + ++ L + KGT    M   G+L L S+   VDL
Sbjct: 214 RVSHMDIQGVKIHLLHVIKGTPMVNMLNKGELKLLSKEEYVDL 256


Searching..................................................done


Results from round 2




>gi|254780628|ref|YP_003065041.1| coproporphyrinogen III oxidase [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040305|gb|ACT57101.1| coproporphyrinogen III oxidase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 395

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 395/395 (100%), Positives = 395/395 (100%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ
Sbjct: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN
Sbjct: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP
Sbjct: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ
Sbjct: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH
Sbjct: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER
Sbjct: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV
Sbjct: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395


>gi|315121829|ref|YP_004062318.1| coproporphyrinogen III oxidase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495231|gb|ADR51830.1| coproporphyrinogen III oxidase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 395

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 302/395 (76%), Positives = 351/395 (88%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           MKY  +Y +++    SN+LG+YVHWPFC KKCPYCDFNSHVRR  + Q +FI+S L EM+
Sbjct: 1   MKYSQSYGDDVVHPDSNTLGIYVHWPFCTKKCPYCDFNSHVRRRAIDQGHFIRSLLVEME 60

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           WMRQL+GPR ISS+FFGGGTPSLI+PQNI+++LD IAKNWT+ SNVEITIEANPSS E  
Sbjct: 61  WMRQLSGPRLISSVFFGGGTPSLIDPQNISILLDNIAKNWTLPSNVEITIEANPSSTEAG 120

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +F GYRKAGVNR+SLGVQSLEE++LRFLGRNHN SEA+ AIHLAR+IFPRMSFDLIYALP
Sbjct: 121 HFLGYRKAGVNRVSLGVQSLEERALRFLGRNHNVSEAVTAIHLARDIFPRMSFDLIYALP 180

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++ QWEMELQ+ALSYAVDHLSLYQLTIEKGTLFYK+HKDGDLVLP E+++ DLYNLTQ
Sbjct: 181 GQSIKQWEMELQKALSYAVDHLSLYQLTIEKGTLFYKLHKDGDLVLPDESLSADLYNLTQ 240

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            IT  +GL++YEISNH+ LG+ESLHNL YWRYGDY+GIGPGAHSRVKV S R+A+SIEKH
Sbjct: 241 IITREYGLYSYEISNHARLGSESLHNLTYWRYGDYVGIGPGAHSRVKVDSQRIAMSIEKH 300

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           PE+W+KMV KNGHA+VEKEFLSSEQQADEFLMMG+RLREGI VKDWE LAGR+LDIECER
Sbjct: 301 PENWVKMVEKNGHAIVEKEFLSSEQQADEFLMMGMRLREGIEVKDWERLAGRSLDIECER 360

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            LQ QGFIER+  SRLRCTQ GM MLD+++A+L+ 
Sbjct: 361 RLQEQGFIERINSSRLRCTQLGMVMLDAIVADLSA 395


>gi|150395235|ref|YP_001325702.1| coproporphyrinogen III oxidase [Sinorhizobium medicae WSM419]
 gi|150026750|gb|ABR58867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sinorhizobium medicae WSM419]
          Length = 381

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 228/379 (60%), Positives = 286/379 (75%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               GVYVHWPFC  KCPYCDFNSHVR   V Q  F+ +FL EM  +R L+GPR+++SIF
Sbjct: 2   DPGFGVYVHWPFCAAKCPYCDFNSHVRHTPVEQPRFVAAFLKEMAAVRDLSGPRTVTSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL++PQ +  ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 62  MGGGTPSLMDPQTVEAILDGIARHWHVPDGIEITMEANPSSVEATRFRGYRAAGVNRVSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ L+FLGR HN  +A+ AI LAR IFPRMSFDLIYA P QT+ +WE EL+ A+
Sbjct: 122 GVQALNDRDLKFLGRLHNVEDALKAIRLAREIFPRMSFDLIYARPNQTVEEWERELKEAV 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ AYE+SN
Sbjct: 182 SYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITADIGMPAYEVSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYGDY GIGPGAH R++VGS ++A + E++PE+WL+ V ++G  +
Sbjct: 242 HARPGAESRHNLTYWRYGDYAGIGPGAHGRLQVGSGKIATATERNPEAWLQNVEEHGDGM 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE+EFL  E QADE L+MGLRLREG+ +  W+ L+GRN D   E  L   GFIER+  SR
Sbjct: 302 VEREFLDFEAQADELLLMGLRLREGVDLARWQSLSGRNPDPAREEFLIEHGFIERIGNSR 361

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LRCT  GM +LD+V+A+LA
Sbjct: 362 LRCTPSGMLILDAVVADLA 380


>gi|15964126|ref|NP_384479.1| coproporphyrinogen III oxidase [Sinorhizobium meliloti 1021]
 gi|307301271|ref|ZP_07581033.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
 gi|307317942|ref|ZP_07597379.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti AK83]
 gi|15073302|emb|CAC41810.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sinorhizobium meliloti 1021]
 gi|306896344|gb|EFN27093.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti AK83]
 gi|306903727|gb|EFN34314.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
          Length = 393

 Score =  442 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 228/391 (58%), Positives = 286/391 (73%), Gaps = 4/391 (1%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LSA  + M        GVYVHWPFC  KCPYCDFNSHVR   V Q  F+ +FL EM  +R
Sbjct: 6   LSAIGDGM----DPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQPRFVAAFLKEMAAVR 61

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L+GPR+++SIF GGGTPSL++P+ +  ILDGIA+ W V   +EIT+EANPSSVE   F+
Sbjct: 62  ALSGPRTVTSIFMGGGTPSLMDPRTVEAILDGIARQWHVPDGIEITMEANPSSVEATRFR 121

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           GYR AGVNR+SLGVQ+L ++ L+FLGR H+   A+ AI LAR IFPRMSFDLIYA P QT
Sbjct: 122 GYRAAGVNRVSLGVQALNDRDLKFLGRLHDVENALKAIRLAREIFPRMSFDLIYARPNQT 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +WE EL+ A+SYAVDHLSLYQLTIE+GT FY +HK G LV+P    +  LY  TQ IT
Sbjct: 182 VEEWERELKEAVSYAVDHLSLYQLTIEEGTPFYGLHKAGKLVVPDGEQSAVLYEATQEIT 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +  G+ AYE+SNH+  GAES HNL YWRYGDY GIGPGAH R+ +GS ++A + E++PE+
Sbjct: 242 ADIGMPAYEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLAIGSGKIATATERNPEA 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           WL+ V + G  +VE+E L  E QADE L+MGLRLREG+ +  W+ L+GR+ D   E  L 
Sbjct: 302 WLQRVEECGEGLVERELLDFEAQADELLLMGLRLREGVDLARWQTLSGRDPDPAREEFLI 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             GFIER+  SRLRCT  GM +LD+V+A+LA
Sbjct: 362 EHGFIERIGNSRLRCTPAGMLILDAVVADLA 392


>gi|209547615|ref|YP_002279532.1| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533371|gb|ACI53306.1| oxygen-independent coproporphyrinogen III oxidase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 401

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 225/384 (58%), Positives = 292/384 (76%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL EM  +R L+GP++
Sbjct: 17  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFASAFLKEMAAVRALSGPKT 76

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V + +EIT+EANPSSVE   F+GYR AGV
Sbjct: 77  VTSIFLGGGTPSLMKPETVSAILDGIARHWHVPAGIEITMEANPSSVEAERFRGYRAAGV 136

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L+++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P QT+ QWE E
Sbjct: 137 NRVSLGVQALDDRDLKFLGRLHDVADALKAIRLARDIFPRMSFDLIYARPDQTVEQWERE 196

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 197 LKQAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITAREGMPA 256

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PESWL MV +
Sbjct: 257 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGPEKIATATERKPESWLDMVER 316

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR+LD + E  L    FIER
Sbjct: 317 DGHGILDEERLGYEEQSDELLLMGLRLREGVDLARWQQLSGRDLDPKREEFLLEHKFIER 376

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LDSV+A+LA
Sbjct: 377 IGNSRLRCTPSGMLILDSVVADLA 400


>gi|222147319|ref|YP_002548276.1| coproporphyrinogen III oxidase [Agrobacterium vitis S4]
 gi|221734309|gb|ACM35272.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           vitis S4]
          Length = 393

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 222/384 (57%), Positives = 285/384 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    G+Y+HWPFC  KCPYCDFNSHVR  K+ Q  F Q+FL EM+ MR ++GP++
Sbjct: 9   LPDTGEPGFGIYIHWPFCAAKCPYCDFNSHVRHQKIDQPRFTQAFLKEMETMRAMSGPKT 68

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P  +  IL+GIA+ WTV   +EIT+EANP+SVE   F+GYR AGV
Sbjct: 69  VTSIFLGGGTPSLMDPATVGAILEGIARYWTVPRGIEITMEANPTSVEAERFRGYRSAGV 128

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L +  L+FLGR H+  +A+ A+ LAR IFPRMSFDLIYA P QT+  W+ E
Sbjct: 129 NRVSLGVQALNDADLKFLGRMHSVEDALKAVRLAREIFPRMSFDLIYARPNQTIADWDAE 188

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT F+ +HK G ++ P E  A  LY  TQ IT   GL A
Sbjct: 189 LKLAISYAVDHLSLYQLTIEEGTPFFGLHKAGKIITPDEEHAAQLYEATQEITEREGLPA 248

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + EKHPE+WL  V +
Sbjct: 249 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGHEKLATATEKHPETWLSAVEQ 308

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           NGH +V ++ L SE+QADE L+MGLRLREG+ +  W+ L+GR+ D   E+ L   GFIER
Sbjct: 309 NGHGMVIQDALGSEEQADELLLMGLRLREGVDLARWQQLSGRDPDPVREQFLLEHGFIER 368

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT +GM +LD+V+A+LA
Sbjct: 369 LGNSRLRCTPKGMLVLDAVVADLA 392


>gi|241202758|ref|YP_002973854.1| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856648|gb|ACS54315.1| oxygen-independent coproporphyrinogen III oxidase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 400

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 223/384 (58%), Positives = 290/384 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FLTEM  +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFTSAFLTEMAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPEAVSAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLARDIFPRMSFDLIYARPDQTVEEWEKE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKEAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGPEKLATATERKPETWLDMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR+LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGFEEQSDELLLMGLRLREGVDLARWQQLSGRDLDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LDSV+A+LA
Sbjct: 376 IGNSRLRCTPSGMLILDSVVADLA 399


>gi|222084654|ref|YP_002543183.1| coproporphyrinogen III oxidase protein [Agrobacterium radiobacter
           K84]
 gi|221722102|gb|ACM25258.1| coproporphyrinogen III oxidase protein [Agrobacterium radiobacter
           K84]
          Length = 392

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 222/384 (57%), Positives = 286/384 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL EM  MR + GP++
Sbjct: 8   LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFTAAFLKEMASMRAIGGPKT 67

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIAK+W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 68  VTSIFLGGGTPSLMKPETVGAVLDGIAKHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 127

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+GVQ+L ++ L+FLGR HN ++A+ AI LAR+IFPRMSFDLIYA P QT+ +WE E
Sbjct: 128 NRVSMGVQALNDRDLKFLGRLHNVADALKAIKLARDIFPRMSFDLIYARPNQTVEEWERE 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P  + +  LY  TQ IT   G+ A
Sbjct: 188 LKEAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGDQSALLYEATQEITEREGMPA 247

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+ +G  ++A + E+ PE+WL++V +
Sbjct: 248 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTLGPKKLATATERKPEAWLELVER 307

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH + ++E L  ++QADE L+MGLRL+EGI +  W+ L+GR  D   E  L   GFIER
Sbjct: 308 DGHGIADQEMLGDDEQADELLLMGLRLKEGIDLVRWQQLSGREPDQAREEFLLEHGFIER 367

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LDSV+A+LA
Sbjct: 368 LGNSRLRCTPAGMLILDSVVADLA 391


>gi|325291759|ref|YP_004277623.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
 gi|325059612|gb|ADY63303.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
          Length = 399

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 222/384 (57%), Positives = 286/384 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    G+Y+HWPFC  KCPYCDFNSHVR   V QE F  +FL+EM  MR L+GPR 
Sbjct: 15  LPDTGDPGFGIYLHWPFCAAKCPYCDFNSHVRHRPVDQERFTAAFLSEMAKMRALSGPRV 74

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++PQ +  +LDG+++ W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 75  VTSIFMGGGTPSLMDPQTVGALLDGVSRFWHVPDGIEITMEANPSSVEAERFRGYRAAGV 134

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +W+ E
Sbjct: 135 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPNQTVAEWDAE 194

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT  +G+ A
Sbjct: 195 LKEAVSYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEHSAVLYEATQEITERYGMPA 254

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G+ ++A   E+HPE+WL+ V +
Sbjct: 255 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTNGASKLATVTERHPETWLETVER 314

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH +V++E L  ++QADE L+MGLRLREGI +  W  L+GR LD E E  L + GF+ER
Sbjct: 315 EGHGMVDQELLGVDEQADELLLMGLRLREGIDLARWSDLSGRELDPEKEEFLLQHGFVER 374

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LD+V+A+LA
Sbjct: 375 IGNSRLRCTPSGMLILDAVVADLA 398


>gi|159184259|ref|NP_353357.2| coproporphyrinogen III oxidase [Agrobacterium tumefaciens str. C58]
 gi|159139586|gb|AAK86142.2| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           tumefaciens str. C58]
          Length = 399

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 223/384 (58%), Positives = 288/384 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    G+Y+HWPFC  KCPYCDFNSHVR   V QE F  +FL EM+ MR L+GPR 
Sbjct: 15  LPDTGDPGFGIYLHWPFCAAKCPYCDFNSHVRHRPVDQERFTAAFLREMEHMRTLSGPRV 74

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++PQ +  +LDGI++ W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 75  VTSIFMGGGTPSLMDPQTVGALLDGISRFWHVPDGIEITMEANPSSVEAERFRGYRAAGV 134

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +W+ E
Sbjct: 135 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPNQTVAEWDAE 194

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT  +G+ A
Sbjct: 195 LKEAVSYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEHSAVLYEATQEITERYGMPA 254

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G+ ++A + E+HPE+WL+ V +
Sbjct: 255 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGASKLATATERHPETWLETVER 314

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH +V++E L  ++QADE L+MGLRLREGI +  W  L+GR+LD E E  L + GF+ER
Sbjct: 315 EGHGMVDQELLGVDEQADELLLMGLRLREGIDLARWSDLSGRDLDPEKEEFLLQHGFVER 374

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LD+V+A+LA
Sbjct: 375 LGNSRLRCTPSGMLILDAVVADLA 398


>gi|190890029|ref|YP_001976571.1| oxygen-independent coprophorphyrinogen III oxidase [Rhizobium etli
           CIAT 652]
 gi|190695308|gb|ACE89393.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
          Length = 400

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 222/384 (57%), Positives = 287/384 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKETAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVAAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPDQTVEEWESE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKQAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSAVLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGREKIATATERKPEAWLDMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGHEEQSDELLLMGLRLREGVDLARWQQLSGRELDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LDSV+A+LA
Sbjct: 376 IGNSRLRCTPSGMLILDSVVADLA 399


>gi|116250146|ref|YP_765984.1| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254794|emb|CAK05868.1| putative oxygen-independent coprophorphyrinogen III oxidase
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 400

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 223/384 (58%), Positives = 291/384 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FLTEM  +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFTSAFLTEMAAVRSMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVSAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P+QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLARDIFPRMSFDLIYARPEQTVEEWEKE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT FY +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKEAISYAVDHLSLYQLTIEEGTPFYGLHKAGKLIVPDGEQSALLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGPEKLATATERKPETWLDMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR+LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGFEEQSDELLLMGLRLREGVDLARWQQLSGRDLDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LDSV+A+LA
Sbjct: 376 IGNSRLRCTPSGMLILDSVVADLA 399


>gi|227820594|ref|YP_002824564.1| coproporphyrinogen III oxidase [Sinorhizobium fredii NGR234]
 gi|227339593|gb|ACP23811.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sinorhizobium fredii NGR234]
          Length = 382

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 224/379 (59%), Positives = 284/379 (74%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               GVYVHWPFC  KCPYCDFNSHVR   V Q  F+ +FL EM  +  L+GPR+++SIF
Sbjct: 2   DPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQPRFVAAFLQEMASVGALSGPRTVTSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EP  +A ILDGIA++W V   +EIT+EANPSSVE   F GYR AGVNR+SL
Sbjct: 62  MGGGTPSLMEPATVAAILDGIARHWHVPDGIEITMEANPSSVEATRFHGYRAAGVNRVSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ L+FLGR HN  +A+ A+ LAR IFPRMSFDLIYA PKQT+ +WE EL+ A+
Sbjct: 122 GVQALNDRDLKFLGRLHNVEDALKAVRLAREIFPRMSFDLIYARPKQTVEEWERELKEAV 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           SYAVDHLSLYQLTIE+GT F+ +HK G L++P    +  LY  TQ IT+A G+ AYE+SN
Sbjct: 182 SYAVDHLSLYQLTIEEGTPFFGLHKAGKLIVPDGEQSAVLYEATQEITAAIGMPAYEVSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYGDY GIGPGAH R+  GS ++A + E++PE+WL++V + G  +
Sbjct: 242 HARRGAESRHNLTYWRYGDYAGIGPGAHGRLTAGSGKIATATERNPEAWLRLVEERGDGI 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            E+E L  E QADE L+MGLRLREG+ +  W+ L+GR+ D E E+ L   GF+ER+  SR
Sbjct: 302 TEQEPLDREAQADELLLMGLRLREGVDLARWQGLSGRDPDPEREQFLIEHGFVERLGNSR 361

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LRCT  GM +LD+V+A+LA
Sbjct: 362 LRCTPAGMLILDAVVADLA 380


>gi|86356017|ref|YP_467909.1| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|86280119|gb|ABC89182.1| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 400

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 221/384 (57%), Positives = 289/384 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL EM  +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKEMAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ ++ ILDGIA++W V + +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVSAILDGIARHWHVPAGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR IFPRMSFDLIYA P QT+ +WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIRLAREIFPRMSFDLIYARPDQTVDEWEKE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+SYAVDHLSLYQLTIE+GT F+ +HK G L++P    +  LY  TQ IT+  G+ A
Sbjct: 196 LKEAISYAVDHLSLYQLTIEEGTPFFGLHKSGKLIVPDGEQSALLYEATQEITAREGMPA 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAES HNL YWRYGDY GIGPGAH R+  G  ++A + E+ PE+WL+MV +
Sbjct: 256 YEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTRGHEKLATATERKPEAWLEMVER 315

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH ++++E L  E+Q+DE L+MGLRLREG+ +  W+ L+GR LD + E  L    FIER
Sbjct: 316 DGHGILDEERLGFEEQSDELLLMGLRLREGVDLARWQQLSGRELDPKREEFLLEHKFIER 375

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  SRLRCT  GM +LDSV+A+LA
Sbjct: 376 IGNSRLRCTSAGMLILDSVVADLA 399


>gi|254501285|ref|ZP_05113436.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Labrenzia alexandrii DFL-11]
 gi|222437356|gb|EEE44035.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Labrenzia alexandrii DFL-11]
          Length = 394

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 201/386 (52%), Positives = 272/386 (70%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            +T       G+YVHWPFC  KCPYCDFNSHVR  +V Q  F  +F  E+    ++T  +
Sbjct: 9   ALTQASDAGFGIYVHWPFCAAKCPYCDFNSHVRHQQVDQARFAAAFERELNHFAEMTQGK 68

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+F GGGTPSL+EP  +  +L  I+  W++ SNVEI++EANP+SVE   F+GYR AG
Sbjct: 69  VVQSVFLGGGTPSLMEPATVERVLTAISDRWSMDSNVEISLEANPTSVEAERFKGYRAAG 128

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+SLGVQSL +  L+ LGR H+A+ A  AI  AR  FPR+SFDLIYA P QT+ QWE 
Sbjct: 129 VNRVSLGVQSLHDADLKLLGRLHDAATARRAIETARATFPRLSFDLIYARPNQTLAQWEA 188

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL+ A++ A DHLSLYQLTIE+GT FY ++  G L +P +++  + Y LTQ +T A GL 
Sbjct: 189 ELKDAIALAADHLSLYQLTIEEGTPFYTLYHGGKLTMPDQDLGAEFYELTQKVTEAEGLP 248

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           AYE+SNH+  GAE  HNL YWRYGDY+G+GPGAH R+ VG +R+A S+E+HPE+WL+ V 
Sbjct: 249 AYEVSNHAKPGAECRHNLVYWRYGDYVGVGPGAHGRLSVGVNRMATSVERHPETWLEAVE 308

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           +NGH ++E   L+ E+Q DEFL+MGLRL EGI +K +E  A R++D +   +L   G +E
Sbjct: 309 QNGHGMIEFSGLNEEEQGDEFLLMGLRLTEGIDLKRYEAFAHRSVDPKRLNDLLEHGMVE 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
            +  +R+R T+ G  +LD+V+A+LA 
Sbjct: 369 ELGENRVRATREGFFVLDAVVADLAA 394


>gi|307943383|ref|ZP_07658727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseibium sp. TrichSKD4]
 gi|307773013|gb|EFO32230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseibium sp. TrichSKD4]
          Length = 388

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 201/382 (52%), Positives = 267/382 (69%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
                 G+Y+HWPFC  KCPYCDFNSHVR   V Q+ F  +F  E+     LT  +++ S
Sbjct: 7   APDGGFGIYIHWPFCAAKCPYCDFNSHVRHQAVDQDRFAAAFERELTHFADLTKGKTVQS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL++PQ +  IL  ++  W++   VEI++EANPSSVE   F+GYR AGVNR+
Sbjct: 67  IFFGGGTPSLMKPQTVERILSKVSGLWSIDDEVEISLEANPSSVESERFRGYRAAGVNRV 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQSL ++ L+ LGR H+   A+ AI  AR+ FPR+SFDLIYA P Q++  W  ELQ+
Sbjct: 127 SLGVQSLHDRDLKLLGRLHDVKTALKAIETARSTFPRLSFDLIYARPDQSLEDWRAELQQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL  A DHLSLYQLTIE GT FY ++  G LV+P  +V  + Y LTQ IT+AHGL AYE+
Sbjct: 187 ALDLAADHLSLYQLTIEPGTPFYTLYHAGKLVVPEPDVGAEFYALTQDITTAHGLPAYEV 246

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+  GAE  HN  YWRYGDY+G+GPGAH R+ VG+ ++A +IE+HPE+WL+ V  +GH
Sbjct: 247 SNHARPGAECRHNQVYWRYGDYVGVGPGAHGRITVGASKLATAIERHPETWLENVETHGH 306

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
             VE + LS E+Q DEFL+MGLRL EGI ++ +E +A R +D      L   G +E++  
Sbjct: 307 GKVEDQGLSEEEQGDEFLLMGLRLTEGIDLQRYEKIACRAIDPRRLSALIEHGMVEKIDE 366

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +R+R T+ G  +LD+V+A+LA 
Sbjct: 367 TRVRATRDGFMVLDAVVADLAA 388


>gi|163757814|ref|ZP_02164903.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
 gi|162285316|gb|EDQ35598.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
          Length = 414

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 212/391 (54%), Positives = 281/391 (71%), Gaps = 1/391 (0%)

Query: 5   SAYENNMT-GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +A+++ +    G     VY+HWPFC  KCPYCDFNSHVR   + Q+ +I +F  E+  MR
Sbjct: 23  NAFKDGLAPDTGKPGFAVYLHWPFCAAKCPYCDFNSHVRHEGIDQQAYIDAFRAEIAAMR 82

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +L+GP+ ++SIFFGGGTPSL+ P+ +A ILD + + W V   +EIT+EANPSSVE   F+
Sbjct: 83  KLSGPQVVTSIFFGGGTPSLMHPETVAAILDAVHETWVVPEGIEITLEANPSSVEAGRFR 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           GYR AGVNR+S+GVQ+L ++ L+ LGR H+ +EA+ AI LAR+IFPRMSFDLIYA P QT
Sbjct: 143 GYRAAGVNRVSMGVQALNDRDLKRLGRLHDRAEALRAIGLARDIFPRMSFDLIYARPDQT 202

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              WE EL+ A+S A DHLSLYQLTIE+GT FY +HK G L++P  +++ +LY LTQS+ 
Sbjct: 203 PHAWEAELKEAISLAADHLSLYQLTIEEGTPFYGLHKAGKLIVPDGDLSAELYELTQSVC 262

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            AHGL AYE+SNH+  GAES HNL YWRYGDY GIGPGAH R+   + ++A + E+ PE+
Sbjct: 263 EAHGLPAYEVSNHARPGAESRHNLTYWRYGDYAGIGPGAHGRLTTSAGKIATATERTPET 322

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           WL  V   GH + E E L + +QADE L+MGLRLREG+ +  W+ L+G  LD E    L 
Sbjct: 323 WLTSVADRGHGMSESEVLGTSEQADELLLMGLRLREGVDLGRWQALSGHRLDAERVEFLI 382

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             G IE +   R+RCT +GM +LD+V+A+LA
Sbjct: 383 DHGMIETMGKDRIRCTPQGMLVLDAVVADLA 413


>gi|118593719|ref|ZP_01551094.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
 gi|118433729|gb|EAV40391.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
          Length = 384

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 201/383 (52%), Positives = 261/383 (68%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G      G+Y+HWPFC  KCPYCDFNSHVR   V Q  F  +F  E+     LT  + + 
Sbjct: 2   GAAEGGFGIYIHWPFCAAKCPYCDFNSHVRHQPVDQARFAAAFERELSHFADLTKNKKVQ 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL+EP  +  IL  ++  W++  NVEI++EANPSSVE   F+GYR AGVNR
Sbjct: 62  SVFLGGGTPSLMEPATVDRILKAVSDRWSMDENVEISLEANPSSVEAERFRGYRSAGVNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLGVQSL +  LR LGR H+A  A  AI  AR  FPR+SFDLIYA P QT+  WE EL 
Sbjct: 122 VSLGVQSLIDTDLRLLGRLHDARTARTAIETARATFPRLSFDLIYARPGQTLAGWEQELN 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++ A DHLSLYQLTIE+GT F+ +   G L +P  ++  + Y LTQ++T+A GL AYE
Sbjct: 182 EAIALAADHLSLYQLTIEEGTPFHTLFHAGKLKVPDPDLGAEFYELTQNVTAAAGLPAYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SNH+  GAE  HNL YWRYGDY+G+GPGAH R+ VG+ R+A S E+HPE+WL+ V  +G
Sbjct: 242 VSNHARPGAECRHNLVYWRYGDYVGVGPGAHGRITVGASRLATSTERHPETWLENVESHG 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
            A+VE   LS E+Q DEFL+MGLRL EGI +K +E  A R++D      L   G +E + 
Sbjct: 302 QALVENAGLSEEEQGDEFLLMGLRLTEGIDLKRYERYASRSVDPARLAALIEHGMVEEIG 361

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +R+R T+ G  +LD+V+A+LA 
Sbjct: 362 ENRIRATREGFFVLDAVVADLAA 384


>gi|239831022|ref|ZP_04679351.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
 gi|239823289|gb|EEQ94857.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
          Length = 409

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 211/384 (54%), Positives = 273/384 (71%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              G ++ GVY+HWPFC+ KCPYCDFNSHVR   V Q  F ++FL EM+ +R+ TGPR+I
Sbjct: 26  RANGEDAFGVYLHWPFCLAKCPYCDFNSHVRHKPVDQARFSEAFLREMECLRERTGPRTI 85

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +SIF GGGTPSL++P+ +  +LDGIA +W+V+ ++E+T+EANP+SVE + F+GYR AGVN
Sbjct: 86  TSIFLGGGTPSLMQPETVGALLDGIASHWSVAPDIEVTLEANPTSVEADRFRGYRAAGVN 145

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+Q+L +  LR LGR H+  EA AAI LAR IFPR+SFDLIYA P QT+  W  EL
Sbjct: 146 RVSLGIQALNDPDLRRLGRMHSVEEAKAAIRLAREIFPRLSFDLIYARPNQTIEAWREEL 205

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+  A DHLSLYQLTIE+GT FY + K G L  P  + A  LY  TQ +T+ HGL AY
Sbjct: 206 KEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPDPDHAAALYEETQRVTAEHGLPAY 265

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISNH+  G ES HNL YWRYG Y+GIGPGAH R      R     EKHPE+WL  V +N
Sbjct: 266 EISNHAVPGRESQHNLVYWRYGQYVGIGPGAHGRFVENDVRTVTMTEKHPETWLDKVERN 325

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           GH ++E+E+L  EQ+ DEFLMMGLRLREGI +  +E L+G  +D +    L  +G IE +
Sbjct: 326 GHGIIEEEYLDGEQEGDEFLMMGLRLREGIDLARYERLSGHAVDEKRLAKLIAEGMIEPM 385

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             S +R T  G  +LD+++A+LA 
Sbjct: 386 DGSFIRATPDGALVLDALVADLAA 409


>gi|217978308|ref|YP_002362455.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
 gi|217503684|gb|ACK51093.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
          Length = 389

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 188/388 (48%), Positives = 255/388 (65%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
            +++        GVYVHWPFC+ KCPYCDFNSHVR   V +  F  + + E+    + T 
Sbjct: 2   ADDLQNGADPGFGVYVHWPFCLSKCPYCDFNSHVRHEPVDEARFGSALIREIAHRAETTR 61

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R ++SIFFGGGTPSL+    +A +++ I ++WT++   EIT+EANP+SVE   F G+R 
Sbjct: 62  GRRVASIFFGGGTPSLMSASTVARVIEAIDRHWTLAPGAEITLEANPTSVEATKFAGFRA 121

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AGVNR+S+GVQ+L +  L+ LGR H++ EA+AA+ +AR  F R SFDLIYA   Q++ QW
Sbjct: 122 AGVNRVSIGVQALNDADLKALGRTHSSVEALAALEIARKTFERFSFDLIYARAGQSVAQW 181

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             EL  AL+ A DHLSLYQLTIE GT+F +M   G LV+P  ++  D ++ TQ I +  G
Sbjct: 182 RSELASALALARDHLSLYQLTIEPGTMFERMRDAGKLVVPGPDLGRDFWDATQEIMNGAG 241

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L AYEISNH+  GAES HNL YWR GDY G+GPGAH R+   + R A + E+ P+ WL  
Sbjct: 242 LPAYEISNHARPGAESRHNLIYWRTGDYAGVGPGAHGRITGQNKRRAQATERDPQKWLSA 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           V   GH ++E + LS E+Q DEFL+MGLRL EGI    +E ++GR LD    ++L   G 
Sbjct: 302 VESAGHGLIEDDVLSREEQGDEFLLMGLRLAEGIEPGRFEAMSGRGLDPRRVQSLIADGM 361

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +E     RLR +  G  +LD+V+A+LA 
Sbjct: 362 VEYTSGGRLRVSAEGFPLLDAVVADLAA 389


>gi|328541649|ref|YP_004301758.1| Coproporphyrinogen III oxidase, anaerobic [polymorphum gilvum
           SL003B-26A1]
 gi|326411401|gb|ADZ68464.1| Coproporphyrinogen III oxidase, anaerobic [Polymorphum gilvum
           SL003B-26A1]
          Length = 385

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 199/385 (51%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT        +YVHWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+    + T  R 
Sbjct: 1   MTLSTDAGFAIYVHWPFCTAKCPYCDFNSHVRHAGVDQARFVAAFERELAHFAEWTRGRR 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + SIFFGGGTPSL+ P  +  IL+ IA +W + ++VEI++EANPSSVE   F+GYR AGV
Sbjct: 61  VQSIFFGGGTPSLMAPCTVERILEAIAGHWALDADVEISLEANPSSVEAERFRGYRTAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L +  L+ LGR H+   A+AAI  AR  FPR+SFDLIYA P QT+  W+ E
Sbjct: 121 NRVSLGVQALNDPDLKMLGRLHDVQTALAAIDTARATFPRLSFDLIYARPGQTVAGWQAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+RA+  A DHLSLYQLTIE+GT F+ + + G L +P  ++  + Y LTQ++T AHGL A
Sbjct: 181 LERAIGLAADHLSLYQLTIEEGTPFFALRQAGKLTVPDPDLGAEFYELTQAVTEAHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAE  HNL YWRYGDY+G+GPGAH R+ +G+ + A +IE+HPE+WL  V  
Sbjct: 241 YEVSNHARPGAECRHNLVYWRYGDYVGVGPGAHGRLSLGASKRATAIERHPETWLANVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH +VE   L+ E+Q DE+L+MGLRL EG+ +  +E LAGR +D      L + G +E+
Sbjct: 301 HGHGMVENLPLTEEEQGDEYLLMGLRLVEGVDLSRYEALAGRQIDPRRLDALLQHGMVEK 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +   +LR T+ G  +LD+V+A+LA 
Sbjct: 361 IGNHKLRATRDGFFVLDAVVADLAA 385


>gi|90420652|ref|ZP_01228558.1| oxygen-independent coproporphyrinogen III oxidase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90334943|gb|EAS48704.1| oxygen-independent coproporphyrinogen III oxidase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 398

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 212/379 (55%), Positives = 264/379 (69%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVHWPFC  KCPYCDFNSHVR   V QE +  +F  E+  M + +   +++SIF
Sbjct: 20  APGFGVYVHWPFCAAKCPYCDFNSHVRHKPVDQERYAAAFERELAEMARRSAGETVTSIF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EP  +  ILD +A NWT++   EIT+EANPSSVE   F+GYR+AGVNR+SL
Sbjct: 80  LGGGTPSLMEPATVRRILDAVAANWTIADGAEITLEANPSSVEAERFRGYREAGVNRVSL 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ LR LGR H+  +A+ AI LAR IFPR+SFDLIYA P QT+  WE EL +A+
Sbjct: 140 GVQALNDRDLRLLGRLHSVDQALHAIGLAREIFPRLSFDLIYARPDQTVAAWESELNQAI 199

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT FY +HK G L++P  +++ DLY  TQ IT+  GL AYEISN
Sbjct: 200 DLAADHLSLYQLTIEEGTPFYALHKAGKLIVPDGDLSADLYESTQRITAERGLPAYEISN 259

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG Y G+GPGAH R+     R AIS E  PE+WLKMV       
Sbjct: 260 HAVPGAESRHNLTYWRYGLYAGVGPGAHGRLMGPGGRHAISNEPLPETWLKMVESWDSGA 319

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           V  + LS  +QADE L+MGLRL EGI +K W  L GR+LD   E +L   G +ER+   R
Sbjct: 320 VVDDLLSPTEQADELLLMGLRLTEGIDLKRWRKLTGRDLDPVSEADLMAHGMVERLGPDR 379

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T  GM +LD+V+A+LA
Sbjct: 380 LRATPAGMLVLDAVVADLA 398


>gi|110636337|ref|YP_676545.1| coproporphyrinogen III oxidase [Mesorhizobium sp. BNC1]
 gi|110287321|gb|ABG65380.1| coproporphyrinogen III oxidase, anaerobic [Chelativorans sp. BNC1]
          Length = 387

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 213/376 (56%), Positives = 267/376 (71%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVYVHWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MR  TGPRS+SSIF GG
Sbjct: 11  FGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFKRELAAMRARTGPRSVSSIFLGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P+ +  I+D +A +W V   VEIT+EANPSSVE + F+GYR AGVNR+S+G+Q
Sbjct: 71  GTPSLMDPKTVGAIIDAVAASWHVPMGVEITLEANPSSVEADRFRGYRSAGVNRVSMGIQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L ++ LRFLGR HN  EA+ AI LAR++FPRMSFDLIYA P QT+  W  EL+ A+ YA
Sbjct: 131 ALNDRDLRFLGRLHNVEEALGAIRLARDLFPRMSFDLIYARPGQTVDAWRAELEEAVGYA 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLTIE+GT FY +   G L +P  ++A DLY +TQ IT+A GL AYEISNH+ 
Sbjct: 191 ADHLSLYQLTIEEGTPFYALRAAGKLTVPDMDLAADLYQVTQEITAARGLPAYEISNHAK 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y+G+GPGAH R      RV    E++PE+W  +V   G  V   
Sbjct: 251 PGAESRHNLIYWRYGEYVGVGPGAHGRFIEDGRRVVTMTERNPETWAALVEARGSGVTGG 310

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+  ++ADEFL+MGLRL EGI +  +E LAG  L  +    L+ +G IE V  SRLR 
Sbjct: 311 EMLTRSEEADEFLLMGLRLVEGIDLDRYEKLAGFPLSPQRVAILREEGLIEPVGNSRLRA 370

Query: 379 TQRGMTMLDSVIANLA 394
           T  GM +LD+++A+LA
Sbjct: 371 TPAGMVVLDALVADLA 386


>gi|153007530|ref|YP_001368745.1| coproporphyrinogen III oxidase [Ochrobactrum anthropi ATCC 49188]
 gi|151559418|gb|ABS12916.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ochrobactrum anthropi ATCC 49188]
          Length = 409

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 210/384 (54%), Positives = 272/384 (70%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              G N+ GVY+HWPFC+ KCPYCDFNSHVR   V Q  F ++FL EM+ +R+ TGPR+I
Sbjct: 26  RANGENAFGVYLHWPFCLAKCPYCDFNSHVRHKPVDQARFSEAFLREMETLRERTGPRTI 85

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +SIF GGGTPSL++P+ +  +L+GIA +W+V+ ++E+T+EANP+SVE + F+GYR AGVN
Sbjct: 86  TSIFLGGGTPSLMQPETVGALLNGIASHWSVAPDIEVTLEANPTSVEADRFRGYRAAGVN 145

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+Q+L +  LR LGR H+  EA AAI LAR IFPR+SFDLIYA P QT+  W  EL
Sbjct: 146 RVSLGIQALNDPDLRRLGRMHSVEEAKAAIRLAREIFPRLSFDLIYARPNQTIEAWREEL 205

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+  A DHLSLYQLTIE+GT FY + K G L  P  + A  LY  TQ +T+ HGL AY
Sbjct: 206 KEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDHAAALYEETQRVTAEHGLPAY 265

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISNH+  G ES HNL YWRYG Y+GIGPGAH R      R     EKHPE+WL  V +N
Sbjct: 266 EISNHAVPGRESQHNLVYWRYGQYVGIGPGAHGRFVENDIRTVTMTEKHPETWLDKVERN 325

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +E L+G  +D +    L  +G IE +
Sbjct: 326 GHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYERLSGHAVDEKRLAKLIAEGMIEPM 385

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             S +R T  G  +LD+++A+LA 
Sbjct: 386 SGSIIRATPDGALVLDALVADLAA 409


>gi|304392748|ref|ZP_07374688.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ahrensia sp. R2A130]
 gi|303295378|gb|EFL89738.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ahrensia sp. R2A130]
          Length = 394

 Score =  421 bits (1083), Expect = e-116,   Method: Composition-based stats.
 Identities = 206/392 (52%), Positives = 262/392 (66%), Gaps = 4/392 (1%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E +    G+   G+YVHWPFC  KCPYCDFNSHVR   V QE F   F  E+  M  L  
Sbjct: 3   EISNQDDGTPGFGIYVHWPFCAAKCPYCDFNSHVRHRTVDQEAFAAGFEREIAHMAALQP 62

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R ++S+FFGGGTPSL+EP  +  IL+ I  +W V   +EIT+EANP+SVE + F GYR 
Sbjct: 63  NRPVTSVFFGGGTPSLMEPATVGTILEAIHSHWRVEDGIEITLEANPTSVEADRFSGYRA 122

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AGVNR+SLGVQSL ++ L+FLGR H+A EAIAAI +AR++FPR+SFD+IYA P Q +  W
Sbjct: 123 AGVNRVSLGVQSLRDEQLKFLGRMHSADEAIAAIGIARDLFPRLSFDMIYARPDQKLDDW 182

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           ++EL++A+S A DHLSLYQLTIE  T FY +HK G   +P    A  LY LTQ IT A G
Sbjct: 183 KVELEQAISLAADHLSLYQLTIEPDTPFYDLHKKGRFAIPDHEQAAQLYELTQDITEAAG 242

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L AYEISNH+  G ES HNL YWR G + GIGPGAH R+ +   R A++ ++HPESWL  
Sbjct: 243 LPAYEISNHAIPGHESRHNLTYWRSGTWAGIGPGAHGRLDMNDGRHALATKRHPESWLDD 302

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           V+ NGHA+VE E LS    ADE L+MG+RLREG+ +  +    G  +D    ++L+  G 
Sbjct: 303 VQDNGHALVEDETLSDADLADEMLLMGMRLREGVDLNRYTQTTGIAIDPIRLQDLKGHGM 362

Query: 368 IERVQFS----RLRCTQRGMTMLDSVIANLAV 395
           +E         RLR T  G  +LD+VIA+LA 
Sbjct: 363 VESWTDEQGRPRLRATPAGWLVLDAVIADLAA 394


>gi|323137232|ref|ZP_08072311.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
 gi|322397590|gb|EFY00113.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
          Length = 388

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 184/385 (47%), Positives = 256/385 (66%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +        GVYVHWPFC+ KCPYCDFNSHVRR  V ++ F+++F  E+     L   R 
Sbjct: 4   IRNAFDPGFGVYVHWPFCLSKCPYCDFNSHVRRGDVDEDRFVEAFAVELAHRASLAPGRE 63

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL+ P  +  IL  IA +WT++ +VEIT+EANP+SVE + F+G++ AG+
Sbjct: 64  VRSVFFGGGTPSLMSPSTVEAILSQIASHWTMARDVEITLEANPTSVEASRFKGFKAAGI 123

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  L+ LGR H+ +EA+ A+ +A ++F R SFDLIY    QT   W  E
Sbjct: 124 NRVSLGIQALNDIDLKGLGRQHSVAEALMALDIANSVFDRTSFDLIYGRTGQTPAAWRKE 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  AL+ A +H+SLYQLTIE  TLF +M   G + +P  +    L+++TQ +T+ HGL +
Sbjct: 184 LDLALARAPEHVSLYQLTIEPDTLFERMVNTGKMTVPDVDTQRALWDVTQEVTARHGLPS 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  GAE  HNL YWRYG+Y G+GPGAH R+     R A + E+HPE WL  V  
Sbjct: 244 YEVSNHARPGAECRHNLVYWRYGEYAGVGPGAHGRIVTTRGRRAQATERHPEMWLTCVET 303

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH +VE E L++EQ+ DEFL+MGLRLREGI  + + +L G+ L       L   G +E 
Sbjct: 304 EGHGLVEDELLNAEQEGDEFLLMGLRLREGIDPQRYFLLTGKKLSQSRISELIGDGLVEV 363

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            + +RLR +  G  +LD+V+A+LA 
Sbjct: 364 TRENRLRVSSEGFPVLDAVVADLAA 388


>gi|148560210|ref|YP_001258208.1| coproporphyrinogen III oxidase [Brucella ovis ATCC 25840]
 gi|161618164|ref|YP_001592051.1| coproporphyrinogen III oxidase [Brucella canis ATCC 23365]
 gi|163842445|ref|YP_001626849.1| coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|254700981|ref|ZP_05162809.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|254707135|ref|ZP_05168963.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|254709322|ref|ZP_05171133.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|260567187|ref|ZP_05837657.1| coproporphyrinogen III oxidase [Brucella suis bv. 4 str. 40]
 gi|261314611|ref|ZP_05953808.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261316833|ref|ZP_05956030.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261751502|ref|ZP_05995211.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261756066|ref|ZP_05999775.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|265987903|ref|ZP_06100460.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|294851575|ref|ZP_06792248.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|306844443|ref|ZP_07477033.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO1]
 gi|148371467|gb|ABQ61446.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella ovis ATCC 25840]
 gi|161334975|gb|ABX61280.1| oxygen-independent coproporphyrinogen III oxidase [Brucella canis
           ATCC 23365]
 gi|163673168|gb|ABY37279.1| Coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|260156705|gb|EEW91785.1| coproporphyrinogen III oxidase [Brucella suis bv. 4 str. 40]
 gi|261296056|gb|EEX99552.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261303637|gb|EEY07134.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261741255|gb|EEY29181.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261745819|gb|EEY33745.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|264660100|gb|EEZ30361.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|294820164|gb|EFG37163.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|306275256|gb|EFM57006.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO1]
          Length = 404

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|225626714|ref|ZP_03784753.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
 gi|256158874|ref|ZP_05456728.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|256254251|ref|ZP_05459787.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|260169749|ref|ZP_05756560.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|261221402|ref|ZP_05935683.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261759290|ref|ZP_06002999.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|265997364|ref|ZP_06109921.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|225618371|gb|EEH15414.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
 gi|260919986|gb|EEX86639.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261739274|gb|EEY27270.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|262551832|gb|EEZ07822.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
          Length = 404

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL  
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPV 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|62289151|ref|YP_220944.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|189023427|ref|YP_001934195.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|237814644|ref|ZP_04593642.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|254690478|ref|ZP_05153732.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254696598|ref|ZP_05158426.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731511|ref|ZP_05190089.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260546450|ref|ZP_05822190.1| coproporphyrinogen III oxidase [Brucella abortus NCTC 8038]
 gi|260756032|ref|ZP_05868380.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260759256|ref|ZP_05871604.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260760979|ref|ZP_05873322.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260885052|ref|ZP_05896666.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|297247567|ref|ZP_06931285.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|62195283|gb|AAX73583.1| oxygen-independent coproporphyrinogen III oxidase, hypothetical
           [Brucella abortus bv. 1 str. 9-941]
 gi|189018999|gb|ACD71721.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|237789481|gb|EEP63691.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|260096557|gb|EEW80433.1| coproporphyrinogen III oxidase [Brucella abortus NCTC 8038]
 gi|260669574|gb|EEX56514.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260671411|gb|EEX58232.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676140|gb|EEX62961.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260874580|gb|EEX81649.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|297174736|gb|EFH34083.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 404

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIY  P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYVRPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|254705352|ref|ZP_05167180.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|256030845|ref|ZP_05444459.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
          Length = 397

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 13  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 73  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 133 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 193 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 253 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 313 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 373 MGGSLIRATPDGALVLDALVADLAA 397


>gi|17988054|ref|NP_540688.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|225851708|ref|YP_002731941.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256045966|ref|ZP_05448838.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112679|ref|ZP_05453600.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|256264780|ref|ZP_05467312.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|260563249|ref|ZP_05833735.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|265992378|ref|ZP_06104935.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994121|ref|ZP_06106678.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|17983802|gb|AAL52952.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella
           melitensis bv. 1 str. 16M]
 gi|225640073|gb|ACN99986.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|260153265|gb|EEW88357.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|262765102|gb|EEZ11023.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003444|gb|EEZ15737.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263095189|gb|EEZ18858.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326408199|gb|ADZ65264.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
 gi|326537914|gb|ADZ86129.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis M5-90]
          Length = 404

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEMTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|254718390|ref|ZP_05180201.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|265983354|ref|ZP_06096089.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306839623|ref|ZP_07472427.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. NF 2653]
 gi|264661946|gb|EEZ32207.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306405321|gb|EFM61596.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. NF 2653]
          Length = 404

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+ YR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRSYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQCVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|256060315|ref|ZP_05450488.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261324290|ref|ZP_05963487.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261300270|gb|EEY03767.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
          Length = 404

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKLVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|256258734|ref|ZP_05464270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
          Length = 397

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 13  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 73  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIY  P QT+  W  E
Sbjct: 133 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYVRPDQTIEAWREE 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 193 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 253 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 313 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 373 MGGSLIRATPDGALVLDALVADLAA 397


>gi|299133259|ref|ZP_07026454.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
 gi|298593396|gb|EFI53596.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
          Length = 385

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 201/385 (52%), Positives = 265/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M     N+ GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E+      T  R+
Sbjct: 1   MPADAQNAFGVYVHWPFCLSKCPYCDFNSHVRHTAIDEERFARAFAREIATTAARTPGRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++PQ +  +LD I ++W V   VE+T+EANP+SVE   F GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMKPQTVGAVLDAIGQHWNVDKGVEVTLEANPTSVEATRFAGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EA+ A+ +AR  F R SFDLIYA P Q+   W  E
Sbjct: 121 NRVSLGVQALDDASLKALGRMHSAREALDAVAIARRSFDRYSFDLIYARPDQSADAWTRE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+S A +HLSLYQLTIE+GT F+ +H+ G L  P E++A  LY++TQ + +AHGL +
Sbjct: 181 LKVAISEAAEHLSLYQLTIEEGTPFFGLHRAGKLKTPDEDLARQLYDVTQEVCAAHGLPS 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R A + +K PE+WL  V +
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIGGIRHATATDKRPEAWLTRVEE 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +GH +  ++ L SEQ+ADEFL+MGLRL EGI  K +  LAGR LD      L+  G I  
Sbjct: 301 DGHGIATEDLLDSEQRADEFLLMGLRLAEGIDPKRYAALAGRPLDPHRIAALKEDGAIVM 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +  RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DESGRLRVTQDGFPLLDAVVADLAA 385


>gi|13473883|ref|NP_105451.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14024634|dbj|BAB51237.1| oxygen-independent coproporphyrinogen III oxidase; HemN
           [Mesorhizobium loti MAFF303099]
          Length = 392

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 212/384 (55%), Positives = 266/384 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M    S   GVY+HWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MR+ TGPR 
Sbjct: 8   MPLDRSPGFGVYIHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMRERTGPRE 67

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A +LD +AKNWTV   +E+T+EANPSSVE   F+GYR AGV
Sbjct: 68  VTSIFLGGGTPSLMKPETVARVLDAVAKNWTVPDGIEVTLEANPSSVEAERFRGYRAAGV 127

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ LRFLGR HN  EA+ AI LAR IFPR+SFDLIYA P QT   W  E
Sbjct: 128 NRVSLGVQALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQTPEAWAAE 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+ +A DHLSLYQLTIE+GT F+ +H     ++P  + A DLY LTQ  TSAHGL A
Sbjct: 188 LEQAIGHAADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQETTSAHGLPA 247

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAES HNL YWRYG+Y+G+GPGAH R      R     E+ PE+W  +V  
Sbjct: 248 YEISNHARPGAESRHNLTYWRYGEYVGVGPGAHGRFVEHGRRTVTIAERMPETWANLVEA 307

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH V   E L+  ++ADEFL+MGLRL EGI +  +E  +GR L       LQ +G +  
Sbjct: 308 KGHGVTGGEILTRSEEADEFLLMGLRLAEGIDLARYEAFSGRGLSSARLSVLQGEGLVAP 367

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  +RLR T  GM +LD+V+A+LA
Sbjct: 368 IGNARLRATPAGMIVLDAVVADLA 391


>gi|23501087|ref|NP_697214.1| coproporphyrinogen III oxidase [Brucella suis 1330]
 gi|256368640|ref|YP_003106146.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|23346956|gb|AAN29129.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Brucella suis 1330]
 gi|255998798|gb|ACU47197.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
          Length = 385

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 206/385 (53%), Positives = 268/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 1   MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 121 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 181 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 241 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 301 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 361 MGGSLIRATPDGALVLDALVADLAA 385


>gi|316931693|ref|YP_004106675.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
 gi|315599407|gb|ADU41942.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
          Length = 385

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 204/385 (52%), Positives = 262/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +E F + F  E+    +  GPR 
Sbjct: 1   MRASPDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARGFAREIATTAERIGPRQ 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +A ILD IA++W V    E+++EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVAAILDAIARHWHVEPGAEVSLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EAI A+ +A++ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKALGRLHSAEEAINAVAIAKSAFDRYSFDLIYARPGQTAAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A +HLSLYQLTIE  T FY +HK G L  P E  A  LY++TQS+ +  GL A
Sbjct: 181 LRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEARALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G+ R A + EK PESWL  V  
Sbjct: 241 YEISNHARPGAECRHNLIYWRGQEYAGIGPGAHGRLDIGAVRYATATEKRPESWLMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  E L+SE++ADEFL+MGLRL EGI  + ++ L+GR LD      L+ +G I  
Sbjct: 301 TGHGLIADERLTSEERADEFLLMGLRLAEGIDPQRYQALSGRPLDPSRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQEGFPVLDAVVADLAA 385


>gi|254472504|ref|ZP_05085904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudovibrio sp. JE062]
 gi|211958787|gb|EEA93987.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudovibrio sp. JE062]
          Length = 387

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 196/385 (50%), Positives = 270/385 (70%), Gaps = 1/385 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT   +   G+YVHWPFC+ KCPYCDFNSHVR   V QE++ ++  TE+    Q+   R+
Sbjct: 1   MTVSPAGGFGIYVHWPFCLAKCPYCDFNSHVRHQPVSQEHYAKALATELARYAQMVPGRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + SIFFGGGTPSL+EP+ +  IL+ IA+ W +  + EI++EANP+SVE   F GYR AGV
Sbjct: 61  VDSIFFGGGTPSLMEPKTVETILNEIARLWHLPDSAEISMEANPTSVEATRFAGYRSAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+Q+L+++ L+ LGR H+ SEAI A+ +AR  FPR+SFDLIYA P QT+  WE E
Sbjct: 121 NRLSVGIQALDDKELKILGRQHSVSEAIQAVEIARKTFPRISFDLIYARPNQTLKAWEQE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+  A DHLS+YQLTIE GT+F +++  G L +   ++A D+++LTQ +T+A G  A
Sbjct: 181 LNRAIDLAADHLSMYQLTIESGTMFQRLYAAGKLEMLDPDLAADMFDLTQEVTAARGFPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVR 309
           YE+SNH+   A+ LHNL YWRYGDY+G+GPGAH R+ +    ++A S EKHPE+WL +V 
Sbjct: 241 YEVSNHAAPDAQCLHNLIYWRYGDYVGVGPGAHGRLTLEDGAKLATSTEKHPETWLGLVE 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
             GH  + ++ L  ++Q DE L+MG+RL EGI V  +E L+GR    +   NLQ  G +E
Sbjct: 301 TKGHGAISEDRLVRDEQGDELLLMGMRLHEGIDVPRYEQLSGRQFSPQRLLNLQENGMVE 360

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            V  +RLR TQ G  +L++VIA LA
Sbjct: 361 WVSNTRLRATQTGFPLLNAVIAELA 385


>gi|261218176|ref|ZP_05932457.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
 gi|261320976|ref|ZP_05960173.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|260923265|gb|EEX89833.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
 gi|261293666|gb|EEX97162.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
          Length = 404

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TG R+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGLRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 259

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 260 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 319

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 320 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 380 MGGSLIRATPDGALVLDALVADLAA 404


>gi|82699090|ref|YP_413664.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|82615191|emb|CAJ10132.1| Putative oxygen-independent coproporphyrinogen III
           oxidase:Elongator protein 3/MiaB/NifB:Radical SAM
           [Brucella melitensis biovar Abortus 2308]
          Length = 385

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 1   MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIY  P QT+  W  E
Sbjct: 121 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYVRPDQTIEAWREE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 181 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 241 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 301 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 361 MGGSLIRATPDGALVLDALVADLAA 385


>gi|114705080|ref|ZP_01437988.1| coproporphyrinogen III oxidase [Fulvimarina pelagi HTCC2506]
 gi|114539865|gb|EAU42985.1| coproporphyrinogen III oxidase [Fulvimarina pelagi HTCC2506]
          Length = 400

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 211/379 (55%), Positives = 269/379 (70%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               GVYVHWPFC  KCPYCDFNSHVR   V Q  +  +F  E+  M + +    ++SIF
Sbjct: 22  DPGFGVYVHWPFCAAKCPYCDFNSHVRMKPVDQARYAAAFERELAEMGRRSKGERVTSIF 81

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EP  + +IL+ I+  WTV+ + EIT+EANPSSVE N F+GYR AGVNR+SL
Sbjct: 82  LGGGTPSLMEPATVGIILNAISNIWTVAPDAEITLEANPSSVEANRFRGYRSAGVNRVSL 141

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ LR LGR H+  EA+ AI LAR IFPR+SFDLIYA P QT+  WE EL RA+
Sbjct: 142 GVQALNDRDLRRLGRLHDVEEALRAIGLAREIFPRLSFDLIYARPDQTVAGWEAELARAI 201

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F+ +HK G L++P  +++ DLY  TQ++T+A GL AYEISN
Sbjct: 202 DLAADHLSLYQLTIEEGTAFHALHKAGKLIVPDGDLSADLYEATQALTAAKGLPAYEISN 261

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG Y G+GPGAH R+    +R A + E  PE+WL+MV    H +
Sbjct: 262 HAVPGAESRHNLTYWRYGHYAGVGPGAHGRLSWDGYRYATANEALPETWLQMVEDWDHGM 321

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           V +E LS  +QADE L+MGLRL EG+ +K W  L+GR +D   ER+L   G +ER+   R
Sbjct: 322 VVEEALSIAEQADELLLMGLRLAEGVDLKRWRELSGRVIDPRSERDLVENGMVERLGPER 381

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LRCT  GM +LD+V+A+LA
Sbjct: 382 LRCTPAGMMVLDAVVADLA 400


>gi|192288761|ref|YP_001989366.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris TIE-1]
 gi|192282510|gb|ACE98890.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 385

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 204/385 (52%), Positives = 264/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E+    +  GPR 
Sbjct: 1   MQASSDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAFAREIATTAERIGPRQ 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +A ILD IA++W V    E+T+EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVAAILDAIARHWHVEPGAEVTLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EA+ A+ +A++ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKALGRMHSAEEALNAVAIAKSAFDRYSFDLIYARPGQTAAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A +HLSLYQLTIE  T FY +HK G L  P E  A  LY++TQS+ +  GL A
Sbjct: 181 LRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEARALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G+ R A + EK PESWL  V  
Sbjct: 241 YEISNHARPGAECRHNLIYWRGHEYAGIGPGAHGRLDIGNARYATATEKRPESWLMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  E L+SE++ADEFL+MGLRL EGI  + +++L+GR LD      L+ +G I  
Sbjct: 301 TGHGLIADEHLTSEERADEFLLMGLRLAEGIDPQRYQLLSGRPLDPSRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQEGFPVLDAVVADLAA 385


>gi|39933404|ref|NP_945680.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris CGA009]
 gi|39647250|emb|CAE25771.1| possible oxygen-independent coproporphyrinogen III oxidase (hemN)
           [Rhodopseudomonas palustris CGA009]
          Length = 385

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 204/385 (52%), Positives = 264/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E+    +  GPR 
Sbjct: 1   MQASSDPAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAFAREIATTAERIGPRQ 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +A ILD IA++W V    E+T+EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVAAILDAIARHWQVEPGAEVTLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H+A EA+ A+ +A++ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKALGRLHSAEEALNAVAIAKSAFDRYSFDLIYARPGQTAAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A +HLSLYQLTIE  T FY +HK G L  P E  A  LY++TQS+ +  GL A
Sbjct: 181 LRYAIGEAAEHLSLYQLTIEPDTPFYSLHKAGKLPTPDEAEARALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G+ R A + EK PESWL  V  
Sbjct: 241 YEISNHARPGAECRHNLIYWRGHEYAGIGPGAHGRLDIGNARYATATEKRPESWLMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  E L+SE++ADEFL+MGLRL EGI  + +++L+GR LD      L+ +G I  
Sbjct: 301 TGHGLIADEHLTSEERADEFLLMGLRLAEGIDPQRYQLLSGRPLDPSRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQEGFPVLDAVVADLAA 385


>gi|254713257|ref|ZP_05175068.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|254716390|ref|ZP_05178201.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
          Length = 397

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TG R+
Sbjct: 13  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGLRT 72

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 73  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 133 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 193 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 252

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 253 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 312

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 313 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 373 MGGSLIRATPDGALVLDALVADLAA 397


>gi|260463465|ref|ZP_05811665.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259030790|gb|EEW32066.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 385

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 211/384 (54%), Positives = 268/384 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M    +   GVY+HWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MRQ TGPR 
Sbjct: 1   MLLDRAPGFGVYIHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMRQRTGPRE 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIFFGGGTPSL++P+ +A +LD +A+NWTV   +E+T+EANPSSVE   F+GYR AGV
Sbjct: 61  VTSIFFGGGTPSLMKPETVARVLDAVARNWTVPDGIEVTLEANPSSVEAERFRGYRTAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ LRFLGR HN  EA+ AI LAR IFPR+SFDLIYA P QT   W  E
Sbjct: 121 NRVSLGVQALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQTPEAWASE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+ +A DHLSLYQLTIE+GT F+ +H     ++P  + A DLY LTQ IT+AHGL A
Sbjct: 181 LEQAIGHAADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQEITTAHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAES HNL YWRYG+Y+G+GPGAH R      R     E+ PE+W  +V  
Sbjct: 241 YEISNHARPGAESRHNLTYWRYGEYVGVGPGAHGRFVEHGRRTVTIAERMPETWANLVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH +   E L+  ++ADEFL+MGLRL EGI +  +E  +GR L       LQ +G +  
Sbjct: 301 KGHGITGGEILTRSEEADEFLLMGLRLAEGIDLSRYEAFSGRGLSSARLSVLQGEGLVAP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +  +RLR T  GM +LD+V+A+LA
Sbjct: 361 IGNTRLRATPAGMIVLDAVVADLA 384


>gi|319780508|ref|YP_004139984.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166396|gb|ADV09934.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 211/386 (54%), Positives = 269/386 (69%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            +M    +   GVYVHWPFC  KCPYCDFNSHVR   V QE F  +F  E+  MR+ TGP
Sbjct: 1   MSMLLDRTPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFEAELATMRERTGP 60

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++S+F GGGTPSL++P+ +A +LD +AKNWTV + +E+T+EANPSSVE   F+GYR A
Sbjct: 61  REVTSVFLGGGTPSLMKPETVARVLDAVAKNWTVPAGIEVTLEANPSSVEAERFRGYRAA 120

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GVNR+SLGVQ+L ++ LRFLGR HN  EA+ AI LAR IFPR+SFDLIYA P QT   W 
Sbjct: 121 GVNRVSLGVQALNDKDLRFLGRLHNVEEALHAIGLAREIFPRLSFDLIYARPGQTPEAWA 180

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            EL++A+ +A DHLSLYQLTIE+GT F+ +H     ++P  + A DLY LTQ IT+AHGL
Sbjct: 181 SELEQAIGHAADHLSLYQLTIEEGTPFHALHAAKKFIIPDNDHAADLYALTQEITTAHGL 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            AYEISNH+  GAES HNL YWRYG+Y+G+GPGAH R      R     E+ PE+W  +V
Sbjct: 241 PAYEISNHARPGAESRHNLTYWRYGEYVGVGPGAHGRFVENGRRTVTIAERMPETWANLV 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
              GH V   E L+  ++ADEFL+MGLRL EGI +  +E  +GR L       LQ +G +
Sbjct: 301 EAKGHGVTGGEILTRSEEADEFLLMGLRLAEGIDLARYEAFSGRGLSSARLSMLQGEGLV 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
             +  +RLR T  GM +LD+V+A+LA
Sbjct: 361 APIGNARLRATAAGMIVLDAVVADLA 386


>gi|306842540|ref|ZP_07475191.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO2]
 gi|306287396|gb|EFM58876.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brucella sp. BO2]
          Length = 385

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TG R+
Sbjct: 1   MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGLRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 121 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P  ++A  LY  TQ +T+ HGL A
Sbjct: 181 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTPEPDLAAALYEETQRVTAEHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWRYG Y GIGPGAH R      R     EKHPE+WL  V +
Sbjct: 241 YEISNHAVPGRESQHNLVYWRYGQYAGIGPGAHGRFVENDVRTVTMTEKHPETWLDHVER 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++E+E+L   Q+ DEFLMMGLRLREGI +  +  L+G  +D +    L  +G IE 
Sbjct: 301 RGHGIIEEEYLDGGQEGDEFLMMGLRLREGIDLARYARLSGHAIDDKRLAKLIAEGMIEP 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  S +R T  G  +LD+++A+LA 
Sbjct: 361 MGGSLIRATPDGALVLDALVADLAA 385


>gi|319407922|emb|CBI81576.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           schoenbuchensis R1]
          Length = 399

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 208/397 (52%), Positives = 266/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFCV KCPYCDFNSHVR+  V Q+ F+ +F  EM    +  GPR I+SIF
Sbjct: 2   AEPFGIYIHWPFCVAKCPYCDFNSHVRKNGVDQQRFVAAFKREMTTQYRTIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AKNWT+    EIT+EANPSSVE   F+GYR AG+NR+SL
Sbjct: 62  IGGGTPSLMTPQTVDALLQTVAKNWTIDDKTEITLEANPSSVEAERFRGYRAAGINRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++LR LGR H+  +A+ AI LAR IF R+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GVQALNDKALRQLGRLHDVKQALHAITLAREIFTRLSFDLIYARPEQTLKQWKYELSQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT+F K++  G L+LP   +A DLYNLTQ IT+ HGL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTVFKKLYAAGKLILPVSQLAADLYNLTQEITTMHGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------------------KVGSHRVAISI 297
           H+  GAES HNL YWRY +Y G GPGAH R                        R     
Sbjct: 242 HAMPGAESRHNLLYWRYNEYAGFGPGAHGRFIQRPMKNFSTFSKIPLSKTEKLERYVTMN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE WL++V   GH  +E E L+ +QQA+E L+MGLRL EG+ +  +E L+ ++L   
Sbjct: 302 EKHPERWLELVETTGHGCIETEQLTRKQQANEMLLMGLRLSEGLDLTRYETLSLKSLSPV 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              NLQ+QG IE V   RL+ T +G  +LD +I  LA
Sbjct: 362 KLANLQQQGLIEMVDNQRLKATTKGFIVLDYIINQLA 398


>gi|148251802|ref|YP_001236387.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. BTAi1]
 gi|146403975|gb|ABQ32481.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW)
           [Bradyrhizobium sp. BTAi1]
          Length = 385

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 202/385 (52%), Positives = 264/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT   + + GVYVHWPFC+ KCPYCDFNSHVR   + Q+ F ++F  E++      G R+
Sbjct: 1   MTSAENEAFGVYVHWPFCLSKCPYCDFNSHVRHTAIDQDRFARAFAREIETTAARIGART 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++PQ +  ILD I K+W V+S+VE+++EANP+SVE   F GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPQTVGAILDAIGKHWHVASDVEVSLEANPTSVEATRFAGYRTAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ++++ SL+ LGR H A EA+ A+ +AR  F R SFDLIYA P QT   W  E
Sbjct: 121 NRVSLGVQAMDDASLKMLGRLHTAEEAMKAVAIARQAFTRYSFDLIYARPDQTPAMWTEE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+  A +HLSLYQLTIE+GT F+ +H  G L  P E +A  LY++TQ + + HGL A
Sbjct: 181 LTRAIGEAAEHLSLYQLTIEEGTPFFGLHAAGKLKTPDEGLARTLYDVTQEVCARHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ +K PE+WL  V  
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGIRHAIATDKRPEAWLMRVES 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           NGH V+  + L+ E++ADEFL+MGLRL EGI  K +  ++GR LD      L+ +G I  
Sbjct: 301 NGHGVMTDDELNREERADEFLLMGLRLAEGIDPKRYAAISGRPLDPRRIALLREEGAIIV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DGDGRLRVTQDGFPVLDAVVADLAA 385


>gi|296447431|ref|ZP_06889356.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
 gi|296255051|gb|EFH02153.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
          Length = 389

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 184/385 (47%), Positives = 253/385 (65%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +        GVYVHWPFC+ KCPYCDFNSHVR+ +V ++ F+ +F TE++    L   R 
Sbjct: 5   IRNAFDPGFGVYVHWPFCLSKCPYCDFNSHVRKGEVDEDRFVDAFRTELRHRAALAPGRE 64

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             S+FFGGGTPSL+    +  IL  I   W ++ +VE+T+EANP+SVE + F+ ++ AGV
Sbjct: 65  TRSVFFGGGTPSLMSASTVEAILREIGDCWPLAPDVEVTLEANPTSVEASRFRSFKAAGV 124

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L +  LR LGR H  +EA+AA+ +A  +F R SFDLIYA P+QT   W  E
Sbjct: 125 NRVSLGVQALNDIELRALGRQHTVAEALAALDVANKVFERTSFDLIYARPQQTPAAWRKE 184

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ AL+   +H+SLYQLTIE  T+F +M++ G L +P  +    L+++TQ +T+  GL A
Sbjct: 185 LELALARVTEHVSLYQLTIEPETMFERMYEAGKLEVPDTDTQRALWDVTQEMTARAGLPA 244

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  G E  HNL YWRYG+Y G+GPGAH R+     R A + E+HPE WL +V  
Sbjct: 245 YEVSNHARPGGECRHNLVYWRYGEYAGVGPGAHGRLITPRGRRAQATERHPEMWLTVVES 304

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH +VE E LS+EQ+ DEFL+MGLRLREGI    +  L G+ L       L   G +E 
Sbjct: 305 EGHGLVEDELLSAEQEGDEFLLMGLRLREGIDPGRFFALTGKKLSQSRVSELVGDGLVEL 364

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            + +RLR +  G  +LD+V+A+LA 
Sbjct: 365 TRDNRLRVSSEGFPVLDAVVADLAA 389


>gi|240137079|ref|YP_002961548.1| putative oxidase [Methylobacterium extorquens AM1]
 gi|240007045|gb|ACS38271.1| putative oxidase [Methylobacterium extorquens AM1]
          Length = 392

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 193/379 (50%), Positives = 249/379 (65%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+     L   R+++SIF
Sbjct: 13  DAGFGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAALAPGRTVTSIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 73  LGGGTPSLMAPDTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSL 132

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+
Sbjct: 133 GVQALDDGDLKRLGRLHSVAEALDAVRTASAHFERFSFDLIYARPEQTPEAWAAELRRAI 192

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            YA +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I    GL AYEISN
Sbjct: 193 DYAAEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICGRAGLPAYEISN 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V ++GH +
Sbjct: 253 HARPGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEDWLARVERDGHGI 312

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R
Sbjct: 313 VETETLSAEDQGDEFLMMGLRLTEGIDSARYASLKGRPLHAGRLDALARDGLVARRPDGR 372

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG  +L++V+A LA
Sbjct: 373 IAATARGAPVLNAVVAELA 391


>gi|163849853|ref|YP_001637896.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           extorquens PA1]
 gi|163661458|gb|ABY28825.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           extorquens PA1]
          Length = 405

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 192/379 (50%), Positives = 248/379 (65%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+     L   R+++SIF
Sbjct: 26  DAGFGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAALAPGRTVTSIF 85

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 86  LGGGTPSLMAPDTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+
Sbjct: 146 GVQALDDGDLKRLGRLHSVAEALDAVRTASAHFERFSFDLIYARPEQTPEAWAAELRRAI 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            YA +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I    GL AYEISN
Sbjct: 206 DYAAEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICGLAGLPAYEISN 265

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE W   V ++GH +
Sbjct: 266 HARPGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEEWRARVERDGHGI 325

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R
Sbjct: 326 VETETLSAEDQGDEFLMMGLRLTEGIDPARYATLKGRPLHAGRLDALVRDGLVARRPDGR 385

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG  +L++V+A LA
Sbjct: 386 IAATARGAPVLNAVVAELA 404


>gi|158425915|ref|YP_001527207.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Azorhizobium caulinodans ORS 571]
 gi|158332804|dbj|BAF90289.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Azorhizobium caulinodans ORS 571]
          Length = 385

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 197/385 (51%), Positives = 259/385 (67%), Gaps = 2/385 (0%)

Query: 11  MTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           MT Q  +   GVYVHWPFC+ KCPYCDFNSHVR+    Q  ++ +F  E+  MR LTGPR
Sbjct: 1   MTAQDTAGGFGVYVHWPFCLAKCPYCDFNSHVRQAPPDQARYVAAFRREIAHMRALTGPR 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  S+FFGGGTPSL+ P+ +  ILD I + WT++ + EIT+EANP+SVE   F+GYR AG
Sbjct: 61  TAGSVFFGGGTPSLMAPETVGAILDAIREAWTLAPDAEITLEANPTSVEAGRFRGYRAAG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+SLGVQ+L++  L+ LGR H   EA+ A+ +AR+IF R+SFDLIYA P Q    W  
Sbjct: 121 VNRVSLGVQALDDGELKKLGRMHTVDEALGAVGIARSIFERVSFDLIYARPGQNPQDWAR 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL RA+    +HLSLYQLTIE GT F K++  G L++P +  A  L+++TQ +T+A GL 
Sbjct: 181 ELSRAIDEGCEHLSLYQLTIEPGTAFEKLYSAGKLLIPDDEHARALWDVTQEVTAASGLP 240

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           AYEISNH+  GAE+ HNL YWRYG Y G+GPGAH RV     R A   E+HPE WLK V 
Sbjct: 241 AYEISNHARPGAEARHNLVYWRYGLYAGVGPGAHGRVGQKGERRATYTERHPEGWLKAVE 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            NGH +V +E L++ +QADE L+MGLRL EG+ +     L G  +D      L  +G + 
Sbjct: 301 ANGHGIVSEEVLTAAEQADEMLLMGLRLAEGVDLARHAALGGTPIDPARIAMLADEGLV- 359

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           R+  +RL+    G  +L++VI  LA
Sbjct: 360 RLDGTRLKVLPPGFPVLNAVIGTLA 384


>gi|218528484|ref|YP_002419300.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           chloromethanicum CM4]
 gi|218520787|gb|ACK81372.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           chloromethanicum CM4]
          Length = 398

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 193/379 (50%), Positives = 248/379 (65%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+    +L   R+++SIF
Sbjct: 19  DAGFGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAELAPGRTVTSIF 78

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 79  LGGGTPSLMAPDTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSL 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+
Sbjct: 139 GVQALDDGDLKRLGRLHSVAEALDAVRTAAAHFERFSFDLIYARPEQTPEAWAAELRRAI 198

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            YA +HLSLYQLTIE GT F+ + + G LV P ++    LY++TQ I    GL AYEISN
Sbjct: 199 DYAAEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDATRALYDVTQEICGLAGLPAYEISN 258

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V ++G  V
Sbjct: 259 HARPGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEEWLARVERDGDGV 318

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R
Sbjct: 319 VETETLSAEDQGDEFLMMGLRLTEGIDPARYATLKGRPLHAGRLDALVRDGLVARRPDGR 378

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG  +L++V+A LA
Sbjct: 379 IAATARGAPVLNAVVAELA 397


>gi|115522383|ref|YP_779294.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisA53]
 gi|115516330|gb|ABJ04314.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris BisA53]
          Length = 386

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 199/382 (52%), Positives = 263/382 (68%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
              N+ GVYVHWPFC+ KCPYCDFNSHVR   + +E ++ +F+ E++     TG R ++S
Sbjct: 5   DADNAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERYLSAFVREIETTAARTGAREVTS 64

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL++P  +  ILD I ++W V+ +VE+++EANP+SVE + F+GYR AGVNR+
Sbjct: 65  IFLGGGTPSLMQPSTVGGILDAIGRHWRVAGDVEVSMEANPTSVEASRFRGYRAAGVNRV 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQ+L++ SL+ LGR H A EA+ A+ +AR IF R SFDLIYA P+QT   W  EL+ 
Sbjct: 125 SLGVQALDDVSLKSLGRMHTAQEAMEAVGIARQIFDRYSFDLIYARPEQTPAMWADELRL 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++ A +HLSLYQLTIE  T F+ +H  G L  P E+    LY++TQ + +  GL AYEI
Sbjct: 185 AIAQAAEHLSLYQLTIEPETPFFGLHAAGKLRTPDEDTGRALYDVTQEVCAQAGLPAYEI 244

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R AI+ EK PE+WL  V   GH
Sbjct: 245 SNHARPGAECRHNLVYWRGQEYAGIGPGAHGRIDLGGRRHAIATEKRPEAWLMRVEACGH 304

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            VV  + L+SE++ADEFL+MGLRL EGI  + ++ LAGR LD      L  +G I     
Sbjct: 305 GVVTDDSLNSEERADEFLLMGLRLAEGIDPRRYQALAGRALDPARIATLLDEGAIVVDAD 364

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RLR TQ G  +LD+V+A+LA 
Sbjct: 365 GRLRVTQSGFPVLDAVVADLAA 386


>gi|85714063|ref|ZP_01045052.1| coproporphyrinogen III oxidase [Nitrobacter sp. Nb-311A]
 gi|85699189|gb|EAQ37057.1| coproporphyrinogen III oxidase [Nitrobacter sp. Nb-311A]
          Length = 386

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 205/383 (53%), Positives = 268/383 (69%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
              + + GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F  E++     +  R++S
Sbjct: 4   ADPATAFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEERFARAFAREIETTAARSRGRTVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL++PQ +  ILD I K+W V  +VE+T+EANP+SVE   F+GYR AGVNR
Sbjct: 64  SIFLGGGTPSLMQPQTVGAILDAIGKHWGVGGDVEVTLEANPTSVEATRFRGYRAAGVNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLGVQ+L++ SL+ LGR H A EA+ A+ +AR++F R SFDLIYA P QT   W  ELQ
Sbjct: 124 VSLGVQALDDPSLKALGRLHTAREALDAVAIARSVFGRYSFDLIYARPDQTPVMWAEELQ 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RA+S AV+HLSLYQLTIE+GT F+ +H  G L  P+E +A  LY++TQ I + HGL AYE
Sbjct: 184 RAISEAVEHLSLYQLTIEEGTPFFGLHTAGKLKTPNEAIARALYDVTQEICTRHGLPAYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V   G
Sbjct: 244 VSNHARPGAECRHNLVYWRGEEYAGIGPGAHGRLDIDGIRHAIATEKRPEAWLMRVEATG 303

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             VV  + L+SE++ADEFL+MGLRLREGI  + +  L+GR+LD      L+ +G I    
Sbjct: 304 DGVVADDLLNSEERADEFLLMGLRLREGIDPQRYAALSGRSLDPRRIAILRDEGAITIST 363

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             RLR TQ G  +LD+V+A+LA 
Sbjct: 364 DGRLRVTQDGFPVLDAVVADLAA 386


>gi|188579739|ref|YP_001923184.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           populi BJ001]
 gi|179343237|gb|ACB78649.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           populi BJ001]
          Length = 392

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 193/379 (50%), Positives = 246/379 (64%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               GVY+HWPFC  KCPYCDFNSHVR   V Q  F+++F  E+     L   R ++SIF
Sbjct: 13  DAGFGVYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLEAFRREIAHAAALAPGRMVTSIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P+ +A +LD +A  W V+ + E+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 73  LGGGTPSLMAPETVAGLLDAVAGAWAVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSL 132

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+  EA++A+  A   F R SFDLIYA P QT   W  EL+RA+
Sbjct: 133 GVQALDDGDLKRLGRLHSVEEALSAVRTAAAHFERFSFDLIYARPDQTAQAWAAELRRAI 192

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +YA +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I  A GL AYEISN
Sbjct: 193 AYAAEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICEAAGLPAYEISN 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HNL YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V + GH +
Sbjct: 253 HARPGAQSRHNLLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEGWLARVEREGHGI 312

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E LS E Q DEFLMMGLRL EGI    +  L GR LD      L   G + R    R
Sbjct: 313 TGTESLSPEDQGDEFLMMGLRLSEGIDPDRYAALKGRPLDATRLEALVTDGLVARRPNGR 372

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG  +L++V+A LA
Sbjct: 373 IAATARGAPVLNAVVAELA 391


>gi|91974877|ref|YP_567536.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB5]
 gi|91681333|gb|ABE37635.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB5]
          Length = 385

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 200/385 (51%), Positives = 261/385 (67%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M      + GVYVHWPFC+ KCPYCDFNSHVR   + +  F ++F  E+       GPR 
Sbjct: 1   MGADPDKAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEARFARAFAREIAATAARIGPRD 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++P  +  ILD I K+W V+ + E+++EANP+SVE   F+GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPSTVGAILDAIGKHWRVTPDAEVSLEANPTSVEATRFRGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++ SL+ LGR H A EA+ A+ +AR+ F R SFDLIYA P QT   WE E
Sbjct: 121 NRVSLGVQALDDASLKTLGRLHTAQEAMDAVAIARSAFDRYSFDLIYARPGQTPAMWEAE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+RA+  A +HLSLYQLTIE  T F+ +H+ G L  P E+ +  LY++TQS+ +  GL A
Sbjct: 181 LRRAIGEAAEHLSLYQLTIEAETPFFALHRAGKLQTPDESASRALYDVTQSVCAELGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +G  R AI+ EK PESW+  V  
Sbjct: 241 YEISNHARPGAECKHNLVYWRGQEYAGIGPGAHGRLDIGGTRYAIATEKRPESWMMRVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            G  V+  + L+SE++ADEFL+MGLRL EGI  + ++ LAGR+LD      L  +G I  
Sbjct: 301 TGTGVITDDRLNSEERADEFLLMGLRLAEGIDPRRYQALAGRSLDPSRIALLCAEGAIVV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DADGRLRVTQAGFPVLDAVVADLAA 385


>gi|254559087|ref|YP_003066182.1| oxidase [Methylobacterium extorquens DM4]
 gi|254266365|emb|CAX22129.1| putative oxidase [Methylobacterium extorquens DM4]
          Length = 392

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 192/379 (50%), Positives = 248/379 (65%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHVR   V Q  F+ +F  E+     L   R+++SIF
Sbjct: 13  DAGFGIYLHWPFCAAKCPYCDFNSHVRHAGVDQPRFLAAFRREIAHAAALAPGRTVTSIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +A +LD +A  W+V+ + E+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 73  LGGGTPSLMAPNTVAGLLDAVAGAWSVAPDAEVTLEANPTSVEATRFRGYRAAGVNRVSL 132

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+ +EA+ A+  A   F R SFDLIYA P+QT   W  EL+RA+
Sbjct: 133 GVQALDDGDLKRLGRLHSVAEALDAVRTASAHFERFSFDLIYARPEQTPEAWAAELRRAI 192

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            YA +HLSLYQLTIE GT F+ + + G LV P ++ +  LY++TQ I    GL AYEISN
Sbjct: 193 DYAAEHLSLYQLTIEPGTPFFGLAQAGRLVPPDDDASRALYDVTQEICGLAGLPAYEISN 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GA+S HN  YWRYG+Y GIGPGAH R+ +   R     EK PE WL  V ++GH +
Sbjct: 253 HARPGAQSRHNQLYWRYGEYAGIGPGAHGRLVLPQGRTGTLTEKAPEDWLARVERDGHGI 312

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE E LS+E Q DEFLMMGLRL EGI    +  L GR L       L R G + R    R
Sbjct: 313 VETETLSAEDQGDEFLMMGLRLTEGIDPARYATLKGRPLHAGRLDALVRDGLVARRPDGR 372

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG  +L++V+A LA
Sbjct: 373 IAATARGAPVLNAVVAELA 391


>gi|146337343|ref|YP_001202391.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. ORS278]
 gi|146190149|emb|CAL74141.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW)
           [Bradyrhizobium sp. ORS278]
          Length = 385

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 203/385 (52%), Positives = 263/385 (68%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M+   S + GVYVHWPFC+ KCPYCDFNSHVR   + Q+ F ++F  E+      TGPR+
Sbjct: 1   MSSAESEAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDQDRFARAFAQEIANTAARTGPRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL++PQ +  ILD I K+W V+ +VE+++EANP+SVE   F GYR AGV
Sbjct: 61  VSSIFLGGGTPSLMQPQTVGAILDAIGKHWHVAPDVEVSLEANPTSVEATRFAGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ++++ SL+ LGR H A EA+ A+ +AR  F R SFDLIYA P QT   W  E
Sbjct: 121 NRVSLGVQAMDDASLKMLGRLHTAEEAMKAVAIARGAFERYSFDLIYARPDQTAAMWTEE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+  A +HLSLYQLTIE+GT F+ +H  G L    E +A  LY++TQ I + HGL A
Sbjct: 181 LTRAIGEAAEHLSLYQLTIEEGTPFFGLHAAGKLKTLDEGLARTLYDVTQEICARHGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R A + +K PE+WL  V  
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIEGIRHATATDKRPEAWLMRVET 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           NGH V+  + L+SE++ADEFL+MGLRL EGI  + +  +AGR LD      L+ +G I  
Sbjct: 301 NGHGVMTDDLLNSEERADEFLLMGLRLSEGIDPRRYAAIAGRTLDPRRIALLREEGAIAV 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 EPDGRLRVTQDGFPVLDAVVADLAA 385


>gi|86747549|ref|YP_484045.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris HaA2]
 gi|86570577|gb|ABD05134.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris HaA2]
          Length = 390

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 203/378 (53%), Positives = 265/378 (70%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + GVYVHWPFC+ KCPYCDFNSHVR   + ++ F ++F  E++   Q  GPR ++SIF G
Sbjct: 13  AFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEDRFARAFAREIEATAQRIGPRDVTSIFLG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++PQ +  ILD I K W V+ +VE+++EANP+SVE   F+GYR AGVNR+SLGV
Sbjct: 73  GGTPSLMQPQTVGAILDAIGKYWRVAPDVEVSLEANPTSVEATRFRGYRAAGVNRVSLGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L++ SL+ LGR H A EA+ A+ +AR  F R SFDLIYA P QT   WE EL+RA+  
Sbjct: 133 QALDDASLKTLGRLHTAQEAMEAVAIARAAFDRYSFDLIYARPGQTPAMWEAELRRAIGE 192

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A +HLSLYQLTIE  T F+ +H+ G L  P E+ +  LY++TQS+ +  GL AYEISNH+
Sbjct: 193 AAEHLSLYQLTIEAETPFFALHRAGKLQTPDESASRALYDVTQSVCAELGLPAYEISNHA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAE  HNL YWR  +Y GIGPGAH R+ +G  R AI+ EK PESWL  V  +G  VV 
Sbjct: 253 RPGAECKHNLVYWRGQEYAGIGPGAHGRLDIGGTRYAIATEKRPESWLMRVEASGTGVVT 312

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            + L+SE++ADEFL+MGLRL EGI  + ++ LAGR+LD      L+ +G I      RLR
Sbjct: 313 DDRLNSEERADEFLLMGLRLAEGIDPRRYQALAGRSLDPSRIAILREEGAIAVDADGRLR 372

Query: 378 CTQRGMTMLDSVIANLAV 395
            TQ G  +LD+V+A+LA 
Sbjct: 373 VTQAGFPVLDAVVADLAA 390


>gi|182680298|ref|YP_001834444.1| oxygen-independent coproporphyrinogen III oxidase [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182636181|gb|ACB96955.1| oxygen-independent coproporphyrinogen III oxidase [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 402

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 186/384 (48%), Positives = 253/384 (65%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              G  + G+Y+HWPFC+ KCPYCDFNSHVR   + +  F+     E+     LT  R +
Sbjct: 19  ASAGEPAFGIYLHWPFCLSKCPYCDFNSHVRAEPIDEPRFLSGLKRELAHRASLTPGRQV 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           SSIFFGGGTPSL++   +A ++D IA +W ++  VEIT+EANP+SVE   F  YR AGVN
Sbjct: 79  SSIFFGGGTPSLMQGSTVAALIDAIAGHWPLAPQVEITLEANPTSVEAERFAAYRAAGVN 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQ+L++ +L+ LGR H+A+EA+ A+  A ++F R SFDLIY  P QT+  W  EL
Sbjct: 139 RVSLGVQALDDAALQSLGRKHSAAEALRAVKTAASLFERYSFDLIYGRPGQTLADWRREL 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL YA DHLSLYQLTIE  T F ++   G   LP  ++  DL++LTQ + +  GL AY
Sbjct: 199 GDALHYARDHLSLYQLTIEPETPFAQLAASGRFTLPEADLGRDLWDLTQEVMNKAGLPAY 258

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SNH+  GAES HNL YWRYG+Y G+GPGAH R+     R A +  + P+ WLK V + 
Sbjct: 259 EVSNHARPGAESRHNLLYWRYGEYAGVGPGAHGRLLTPHGRRAQATLRQPDLWLKTVEER 318

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           G  + E   L+ E+QADEFL+MGLRL EGI+ +++  +AGR+ D    + L  +G +E  
Sbjct: 319 GEGLTEDMPLTREEQADEFLLMGLRLTEGIAPENFRAVAGRDFDPRRLQTLLSEGMLEYT 378

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R +  G  +LD+VIA+LA 
Sbjct: 379 PHGRVRVSAEGFPVLDAVIADLAA 402


>gi|209883565|ref|YP_002287422.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oligotropha carboxidovorans OM5]
 gi|209871761|gb|ACI91557.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oligotropha carboxidovorans OM5]
          Length = 385

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 205/385 (53%), Positives = 267/385 (69%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M     N+ GVYVHWPFC+ KCPYCDFNSHVR   + +E F ++F+ E+         R+
Sbjct: 1   MRADAHNAFGVYVHWPFCLSKCPYCDFNSHVRHAAIDEERFARAFVREIATTAARAPDRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++PQ +A ILD IA++W+V  +VE+T+EANP+SVE   F GYR AGV
Sbjct: 61  VTSIFLGGGTPSLMKPQTVATILDAIAQHWSVDKSVEVTLEANPTSVEATRFAGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L++QSL+ LGR H A EA+ A+ +AR  F R SFDLIYA P Q +  W  E
Sbjct: 121 NRVSLGVQALDDQSLKALGRLHTAREALDAVAIARRAFKRYSFDLIYARPDQGVQAWAGE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA++ A +HLSLYQLTIE+GT F+ +H+ G L  P+E++A  LY++TQ I +A+ L A
Sbjct: 181 LHRAIAEAAEHLSLYQLTIEEGTPFFGLHRAGKLKTPNEDLARALYDVTQEICAANNLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE WL  V +
Sbjct: 241 YEISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGIRHAIATEKRPEVWLSRVEE 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            GH ++  + L SEQ+ADEFL+MGLRL EGI  + +E LAGR LD      L+  G I  
Sbjct: 301 EGHGLITDDLLDSEQRADEFLLMGLRLAEGIDPQRYETLAGRPLDPHRIAALKNDGAIVM 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               RLR TQ G  +LD+V+A+LA 
Sbjct: 361 DINGRLRVTQAGFPLLDAVVADLAA 385


>gi|92115781|ref|YP_575510.1| coproporphyrinogen III oxidase [Nitrobacter hamburgensis X14]
 gi|91798675|gb|ABE61050.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrobacter hamburgensis X14]
          Length = 386

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 204/384 (53%), Positives = 267/384 (69%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +   + + GVYVHWPFC+ KCPYCDFNSHVR   + +E F+++F  E++     +  R +
Sbjct: 3   SADPTTAFGVYVHWPFCLSKCPYCDFNSHVRHAPIDEERFVRAFTREIETTAARSPGREV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           SSIF GGGTPSL++PQ +  IL+ I KNW V+ N EIT+EANP+SVE   F+GYR AGVN
Sbjct: 63  SSIFLGGGTPSLMQPQTVGAILEAIGKNWRVADNAEITLEANPTSVEATRFRGYRAAGVN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQ+L++ SL+ LGR H A EA+ A+ +AR++F R SFDLIYA P QT   W  EL
Sbjct: 123 RVSLGVQALDDASLKALGRLHTAREALDAVAIARSVFDRYSFDLIYARPDQTPAMWSEEL 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           QRA+S A +HLSLYQLTIE+GT F+ +H  G L  P E ++  LY++TQ I + HGL AY
Sbjct: 183 QRAISEAAEHLSLYQLTIEQGTPFFGLHAAGKLKTPDEAISRALYDVTQEICARHGLPAY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V   
Sbjct: 243 EISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGDRHAIATEKRPEAWLMRVEAI 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           G+ +V  + L+SE++ADEFL+MGLRLREGI  + +  L+GR LD      L+ +G I   
Sbjct: 303 GNGIVADDLLNSEERADEFLLMGLRLREGIDPQRYAALSGRLLDPRRIAILREEGAIAIS 362

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              RLR TQ G  +LD+V+A+LA 
Sbjct: 363 PDGRLRVTQDGFPVLDAVVADLAA 386


>gi|75674390|ref|YP_316811.1| coproporphyrinogen III oxidase [Nitrobacter winogradskyi Nb-255]
 gi|74419260|gb|ABA03459.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrobacter winogradskyi Nb-255]
          Length = 386

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 204/384 (53%), Positives = 268/384 (69%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
               + + GVY+HWPFC+ KCPYCDFNSHVR   + +E F ++F  E++     +  R++
Sbjct: 3   PADPAAAFGVYIHWPFCLSKCPYCDFNSHVRHAPIDEERFTRAFAREIETTAARSRGRTV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           SSIF GGGTPSL+ PQ +  ILD I K+W+V+ +VE+T+EANP+SVE   F+GYR AGVN
Sbjct: 63  SSIFLGGGTPSLMRPQTVGAILDAIGKHWSVADDVEVTLEANPTSVEATRFRGYRAAGVN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQ+L++ SL+ LGR H A EA  A+ +AR++F R SFDLIYA P QT   W  EL
Sbjct: 123 RVSLGVQALDDSSLKALGRLHTAREAQDAVAIARSVFDRYSFDLIYARPDQTPAMWAGEL 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           QRA+S A +HLSLYQLTIE GT F+ +H  G L  P E +A DLY++TQ + + HGL AY
Sbjct: 183 QRAISEAAEHLSLYQLTIEAGTPFFDLHAAGKLKTPDEAMARDLYDVTQDVCARHGLPAY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V  N
Sbjct: 243 EISNHARPGAECRHNLVYWRGQEYAGIGPGAHGRLDIDGVRHAIATEKRPEAWLMRVEAN 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           G+ +V  + L+SE++ADEFL+MGLRLREGI  + +  L+GR+LD      L+ +G I   
Sbjct: 303 GNGIVADDPLNSEERADEFLLMGLRLREGIDPRRYAALSGRSLDPRRIAILRDEGAIMIS 362

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              RLR TQ G  +LD+V+A+LA 
Sbjct: 363 TDGRLRVTQDGFPVLDAVVADLAA 386


>gi|319406449|emb|CBI80089.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella sp.
           1-1C]
          Length = 399

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 202/397 (50%), Positives = 261/397 (65%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC+ KCPYCDFNS+VR   V Q  F  +F  E+    +  GPR I+SIF
Sbjct: 2   TKPFGIYIHWPFCMSKCPYCDFNSYVRTNGVDQPRFANAFEREITTQAKKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AKNWT+    EIT+EANPSSVE + F+GY+ AGVNR+SL
Sbjct: 62  IGGGTPSLMAPQTVDRLLQAVAKNWTIDDKAEITLEANPSSVEADRFRGYQLAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++L+ LGR H+  +A  AI+LAR IFPR+SFDLIYA PKQT+ QWE EL +A+
Sbjct: 122 GVQALNDKALQQLGRLHSVKQAFHAINLAREIFPRLSFDLIYARPKQTLKQWETELLQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A DHLSLYQLTIE GT F K+H  G L+LP    A +LY LTQ IT+ +GL AYEISN
Sbjct: 182 NLAADHLSLYQLTIEDGTTFKKLHAAGKLILPPSEQAANLYTLTQEITTMYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------------------KVGSHRVAISI 297
           H+  GAES HNL YWRY +Y G GPGAH R                       +R     
Sbjct: 242 HAIPGAESRHNLLYWRYHEYAGFGPGAHGRFIKQSLKNSSFFPETFPSKIENHNRYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE+WL++V   GH  +E E LS EQQA+E L+MG+RL EG+ +  ++ L+ ++L  +
Sbjct: 302 EKHPENWLELVENTGHGCIETELLSQEQQANEMLLMGMRLAEGLDLARYKTLSCQSLPRK 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               LQ+QG IE      L+ T+ G   LD +I  LA
Sbjct: 362 KLIRLQKQGLIEITDNQHLKATKTGRIFLDHIIYQLA 398


>gi|121602251|ref|YP_989584.1| coproporphyrinogen III oxidase [Bartonella bacilliformis KC583]
 gi|120614428|gb|ABM45029.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bartonella bacilliformis KC583]
          Length = 392

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 210/389 (53%), Positives = 267/389 (68%), Gaps = 11/389 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+HWPFC  KCPYCDFNSHVR   V Q++F+++F  EM       GPR I+SIF 
Sbjct: 3   EPFGIYIHWPFCTAKCPYCDFNSHVRVKGVNQQHFVKAFEREMTTQYHEIGPRHITSIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P  +  +L  +AKNWT+   +EIT+EANPSSVE   F GYR AGVNR+SLG
Sbjct: 63  GGGTPSLMTPHTVDALLQSVAKNWTIDDKIEITLEANPSSVEAERFHGYRTAGVNRLSLG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ+L +++L+ LGR H+  +A+ AI+LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+ 
Sbjct: 123 VQALNDKALQQLGRLHDVKQALHAINLARKIFPRLSFDLIYARPEQTLKQWKDELLQAID 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A DHLSLYQLTIEKGT F ++H +G L+LP   +A DLYNLTQ IT+ HGL AYEISNH
Sbjct: 183 LAADHLSLYQLTIEKGTAFKRLHAEGKLILPEPELAADLYNLTQEITALHGLPAYEISNH 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-----------HRVAISIEKHPESWL 305
           +  GAES HNL YWRY +Y G GPGAH R    S            R     EKHPE WL
Sbjct: 243 AISGAESRHNLLYWRYHEYAGFGPGAHGRFTKHSLALSERPSSQQTRHVTINEKHPERWL 302

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           K+V   GH  +E E L+ EQQADE L+MGLRL EG  +  +E L+ +++  E   NLQ+Q
Sbjct: 303 KLVDTKGHGCIETEELTGEQQADEMLLMGLRLSEGFDLTRYETLSTKSVSSEKLTNLQQQ 362

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G +E +   RL+ T+ G  +LD +I+ LA
Sbjct: 363 GLVEMIDNQRLKVTKTGRILLDHIISQLA 391


>gi|319898242|ref|YP_004158335.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           clarridgeiae 73]
 gi|319402206|emb|CBI75737.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           clarridgeiae 73]
          Length = 399

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 208/397 (52%), Positives = 266/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFCV KCPYCDFNS+VR   V Q  F  +F  EM       GPR I+SIF
Sbjct: 2   TKPFGIYIHWPFCVSKCPYCDFNSYVRINGVDQPRFAAAFEREMTTQAHEIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  IAKNWT+    EIT+EANPSSVE + F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMTPQTVDRLLQAIAKNWTIDDKTEITLEANPSSVEADRFRGYRLAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++L+ LGR HN  +A+ AI+LAR IFPR+SFDLIYA PKQT+ QWE EL +A+
Sbjct: 122 GVQALNDKALQQLGRLHNVKQALYAINLAREIFPRLSFDLIYARPKQTLKQWESELLQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A DHLSLYQLTIE GT F K+H  G L+LP+   A +LY LTQ IT+ +GL AYEISN
Sbjct: 182 NLAADHLSLYQLTIEDGTNFKKLHAAGKLILPTSERAANLYTLTQEITTMYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------------------KVGSHRVAISI 297
           H+  GAES HNL YWRY +Y G GPGAH R                       +R     
Sbjct: 242 HAIPGAESCHNLLYWRYHEYAGFGPGAHGRFIKQQLKNSSFLSETLLSKTENHNRYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EK+PE+WLK+V   GH  ++ E L+ EQQA+E L+MGLRL EG+++K +E L+G++L  +
Sbjct: 302 EKYPENWLKLVETIGHGCIDTEQLTQEQQANEMLLMGLRLSEGLNLKRYETLSGQSLSPK 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ++G IE      L+ T  G  +LD +I  LA
Sbjct: 362 KLISLQQKGLIEMTSNQHLKATATGRILLDHIICQLA 398


>gi|298293790|ref|YP_003695729.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
 gi|296930301|gb|ADH91110.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
          Length = 381

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 192/380 (50%), Positives = 249/380 (65%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               GVYVHWPFC  KCPYCDFNSHVR     Q  F+++F  E+   R+  G R   S+F
Sbjct: 2   DPGFGVYVHWPFCKAKCPYCDFNSHVRHSPPDQARFLKAFRAEIAHTRERIGQRRTQSVF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +  ILD I + W + +  E+T+EANP+SVE   F+GYR AGVNR+SL
Sbjct: 62  FGGGTPSLMEPATVGAILDAINEAWPLDARAEVTLEANPTSVEAGRFRGYRAAGVNRVSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++ SL+ LGR H A EA+ A+ +AR  F R+SFDLIYA P Q    W  EL+RA+
Sbjct: 122 GVQALDDASLKALGRMHTAQEALGAVAVARAAFERVSFDLIYARPDQKPEAWAAELKRAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +HLSLYQLTIE GT F  +H+ G L++P + VA  L+++TQ  T   GL +YE+SN
Sbjct: 182 EEGCEHLSLYQLTIEDGTPFAALHRAGKLIVPEDEVARALWDVTQETTREAGLPSYEVSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG+Y G+GPGAH R+     RVA S E+ PE W+  V   GH V
Sbjct: 242 HARPGAESRHNLLYWRYGEYAGLGPGAHGRLDTPEGRVATSTERGPEDWVARVEHAGHGV 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           +  E L+  +QADE+L+MGLRL EGI    +  LAG +LD      L     IE +   R
Sbjct: 302 IVDERLTRAEQADEYLLMGLRLAEGIDRARFARLAGHDLDAGRVATLIEDAMIEELPGER 361

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T  G+ +LD+++A+LA 
Sbjct: 362 LRATALGLPVLDAIVADLAA 381


>gi|90421847|ref|YP_530217.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB18]
 gi|90103861|gb|ABD85898.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris BisB18]
          Length = 386

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 200/386 (51%), Positives = 266/386 (68%), Gaps = 1/386 (0%)

Query: 11  MTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           MT    +   GVY+HWPFC+ KCPYCDFNSHVR   + QE ++++F+ E++   + T  R
Sbjct: 1   MTRADRDPAFGVYIHWPFCLSKCPYCDFNSHVRHVAIDQERYLRAFVREIETTAERTPGR 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++SIF GGGTPSL++P  +  IL+ I K+W V+++VEI++EANP+SVE   F+GYR AG
Sbjct: 61  EVTSIFLGGGTPSLMQPATVGGILEAIGKHWNVAADVEISMEANPTSVEATRFRGYRAAG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+SLGVQ+L++ SL+ LGR H A EA+ A+ +AR+IF R SFDLIYA P QT   W+ 
Sbjct: 121 VNRVSLGVQALDDLSLKTLGRLHTAQEAMEAVAIARSIFERYSFDLIYARPGQTPAMWQA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ELQ+A+  A +HLSLYQLTIE  T F+ +H  G L  P E  A  LY++TQ + +AHGL 
Sbjct: 181 ELQKAIGEAAEHLSLYQLTIEADTPFFGLHAAGKLQTPDEATARALYDVTQEVCAAHGLP 240

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +YEISNH+  GAE  HNL YWR  +Y GIGPGAH R+ +   R AI+ EK PE+WL  V 
Sbjct: 241 SYEISNHARAGAECRHNLLYWRGQEYAGIGPGAHGRLDINGIRHAIATEKRPEAWLMRVE 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
             GH VV  + L+SE++ADEFL+MGLRL EGI    ++ L+GR LD      L+ +G I 
Sbjct: 301 ACGHGVVVDDRLNSEERADEFLLMGLRLAEGIDPTRYQALSGRALDPARIAVLREEGAIV 360

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                RLR T  G  +LD+V+A+LA 
Sbjct: 361 VDPNGRLRVTLSGFPLLDAVVADLAA 386


>gi|84501189|ref|ZP_00999394.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
 gi|84390480|gb|EAQ02968.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
          Length = 384

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 180/380 (47%), Positives = 247/380 (65%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV R  + Q+ ++ ++L+E+         R +SS+F
Sbjct: 7   AGGFGIYIHWPFCEAKCPYCDFNSHVSR-SIDQDRWLSAYLSELDRQAAEVPGRVVSSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  +  +LD IA+ W  +++ EIT+EANP SVE + F+ Y  AGV+R+S+
Sbjct: 66  FGGGTPSLMDPHVVGAVLDRIARLWPQANDPEITLEANPGSVESSRFRAYHSAGVSRVSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G Q++ +  LR LGR H  +EA+ A  +AR+ F R+SFDLIYA   QT   W+ EL++AL
Sbjct: 126 GFQAMNDGDLRRLGRLHTVAEALRAFDIARSCFERVSFDLIYARQDQTPEDWQKELEQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             AVDHLSLYQLTIE+GT F   ++ G L  LP E+ A  +Y +TQ++T+A G   YE+S
Sbjct: 186 ELAVDHLSLYQLTIEEGTAFGDRYRIGKLRGLPDEDAAATMYEITQAVTAAAGFEPYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HN  YWRYGDY+GIGPGAH R+ +G  R A    + P+ WLK   + G+ 
Sbjct: 246 NHARPGAESRHNSLYWRYGDYVGIGPGAHGRLTLGGKRNATEAIRMPDGWLKAAEQ-GNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  LS   QA EFL+MGLRL EG+ +  +  LAGR L      +L   G IE     
Sbjct: 305 DKRRTPLSPSDQATEFLLMGLRLTEGVDMMRYTRLAGRPLSQSSVLDLSEMGMIE-TDGQ 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR + +G  +L++VIA L 
Sbjct: 364 RLRVSPQGRLVLNAVIARLL 383


>gi|300024894|ref|YP_003757505.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526715|gb|ADJ25184.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 474

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 193/427 (45%), Positives = 255/427 (59%), Gaps = 39/427 (9%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
             +++     + S GVYVHWPFC +KCPYCDFNSHVR     +  F+ +++ E+     L
Sbjct: 39  DLQSSGLRDDAPSFGVYVHWPFCAQKCPYCDFNSHVRFGGWDEARFLAAYVREIDATADL 98

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G R++SSIFFGGGTPSL++P   A ILD IAK WT++ + EIT+EANP+SVE   F+G+
Sbjct: 99  IGARTVSSIFFGGGTPSLMQPATTAAILDHIAKRWTIAPDAEITLEANPNSVEAARFRGF 158

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           R+AGVNR+S+GVQSL +  LR LGR H+ +EA AA+ +A + F R SFDLIYA PKQT  
Sbjct: 159 REAGVNRVSIGVQSLRDDELRKLGRIHSVAEAKAALDVAHSTFDRFSFDLIYARPKQTPD 218

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W  EL  AL  A DHLSLYQLTIE  T +  +H  G LV+P ++ A  LY +T  +T+A
Sbjct: 219 AWRAELSEALDLAGDHLSLYQLTIEPDTAYAALHAKGKLVIPDDDAARALYEITDELTAA 278

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            GL AYE+SN++  G+ES HNL YWRYG+Y GIG GAH R+ V   R A   E++PE+W 
Sbjct: 279 RGLAAYEVSNYARPGSESRHNLLYWRYGEYAGIGAGAHGRIIVKGQRTATVTERNPEAWA 338

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           + V  +G  VVE   L+ E+QADE L+MGLRL EG+ +     L G          L   
Sbjct: 339 ERVEASGTGVVESTVLTLEEQADEMLLMGLRLSEGVDLDQLAALGGVRPAAHVVGGLIAM 398

Query: 366 GFIERVQ---------------------------------------FSRLRCTQRGMTML 386
           G +E V                                         SR+R T+ G  +L
Sbjct: 399 GLLEVVAASSAGRSGVVLAQDDDRDIIRGCAGPGLAPETFAAHVTSPSRIRVTRAGRLVL 458

Query: 387 DSVIANL 393
           ++V+A L
Sbjct: 459 NAVVAEL 465


>gi|49474877|ref|YP_032918.1| coproporphyrinogen III oxidase [Bartonella henselae str. Houston-1]
 gi|49237682|emb|CAF26869.1| Oxygen-independent coproporphyrinogen III oxidase [Bartonella
           henselae str. Houston-1]
          Length = 399

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 204/397 (51%), Positives = 264/397 (66%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+ +F  E++      GPR I SIF
Sbjct: 2   NEPFGIYIHWPFCAAKCPYCDFNSHVRLHGVDQPRFVTAFEREIETQYHKIGPRCIKSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +A+ W +    EIT+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMTPQTVDALLQILARTWNIDDKAEITMEANPSSVEAERFRGYRVAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++LR LGR H+  +A+ AI LAR IFPR+SFDLIYA P QT+ QW+ EL +A+
Sbjct: 122 GVQALNDKALRQLGRLHDVKQALHAIALARKIFPRLSFDLIYARPGQTLEQWKCELFQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F ++H  G L LP   +A DLY LTQ IT+ HGL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTAFKRLHAAGRLFLPESELAADLYQLTQEITALHGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG------------------SHRVAISI 297
           H+  GAES+HNL YWRY +Y G GPGAH R                        R     
Sbjct: 242 HAISGAESVHNLLYWRYHEYAGFGPGAHGRFIEHSQNHSSASSKADPSQIENRERSVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EK+PE WL++V K GH  +E E L++EQQA+E L+MGLRL EG+ +  ++ L+ +NL +E
Sbjct: 302 EKYPEHWLELVEKTGHGCIETEQLTTEQQANEMLLMGLRLCEGLDLIRYKSLSSKNLPME 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ+QG +E V+  RL+ T +G  +LD +I  LA
Sbjct: 362 KLIDLQQQGLVEMVENQRLKATNKGRILLDYIINQLA 398


>gi|240849728|ref|YP_002971116.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
 gi|240266851|gb|ACS50439.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
          Length = 399

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 210/397 (52%), Positives = 266/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+ +F  E++      GPR I+SIF
Sbjct: 2   NEPFGIYIHWPFCAAKCPYCDFNSHVRIHGVDQPRFVTAFKREIETQYHKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EPQ +  +L  +AK W V+ NVEIT+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMEPQTVDALLQALAKKWVVNDNVEITLEANPSSVEAERFRGYRAAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +++LR LGR HN  +A+ AI LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GIQALNDKALRKLGRLHNVEQALCAIDLARQIFPRLSFDLIYARPEQTLEQWKSELVQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F ++H  G L+LP   +A DLYNLTQ IT+ HGL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTAFKRLHDAGRLILPPSELAADLYNLTQEITALHGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG------------------SHRVAISI 297
           H+  GAES HNL YWRY  Y G GPGAH R                        R     
Sbjct: 242 HAIPGAESAHNLLYWRYHQYAGFGPGAHGRFIEHAPNHSSACSKTLSSHLENRERYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE WL +V K GH  +E E L++EQQA+E L+MGLRL EG+ +  +E L+ + + +E
Sbjct: 302 EKHPEQWLNLVEKTGHGCIETEHLTTEQQANEMLLMGLRLSEGLELIRYETLSPKRIPME 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ Q  IE V   RL+ T +G  +LD +I+ LA
Sbjct: 362 KLIDLQHQELIEMVDNQRLKATTKGRIVLDHIISQLA 398


>gi|170738391|ref|YP_001767046.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
 gi|168192665|gb|ACA14612.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
          Length = 398

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 187/377 (49%), Positives = 249/377 (66%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+HWPFC  KCPYCDFNSHVR     +  +  +F  E+     L   R+++S+F GG
Sbjct: 22  FGVYLHWPFCAAKCPYCDFNSHVRHAPPDEAAWRAAFAREIAHAAALAPGRTVTSVFLGG 81

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +  +LD +A  WTV+   EIT+EANP+SVE + F+GYR AGVNR+SLGVQ
Sbjct: 82  GTPSLMQPATVGALLDAVAAAWTVAPGAEITLEANPTSVEADRFRGYRLAGVNRVSLGVQ 141

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ +LR LGR H+A+EA+AA+  A   F R SFDLIYA P QT   W  EL++A++ A
Sbjct: 142 ALDDGALRRLGRLHSAAEALAAVETASRHFARFSFDLIYARPDQTPAAWAAELRQAIARA 201

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE+GT F+ +   G LV P E+ A  L+++TQ +  A GL AYEISNH+ 
Sbjct: 202 AEHLSLYQLTIEEGTPFHGLAAAGRLVPPDEDTARALFDVTQEVCGAAGLPAYEISNHAR 261

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y GIGPGAH R+ +   R     E+ PE+WL  V + GH +V  
Sbjct: 262 PGAESRHNLLYWRYGEYAGIGPGAHGRLVLPGGRTGTVTERAPEAWLARVAREGHGIVRT 321

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+  ++ DEFL+MGLRL EGI    +  LAGR LD      L  +  +   Q  R+  
Sbjct: 322 EALTQAEEGDEFLVMGLRLAEGIDPARFARLAGRPLDRRRLDGLLAEDLVRVTQAGRIAA 381

Query: 379 TQRGMTMLDSVIANLAV 395
           T +G  +L++V+A LA 
Sbjct: 382 TPKGAPVLNAVVAELAA 398


>gi|319404961|emb|CBI78563.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella sp.
           AR 15-3]
          Length = 398

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 206/396 (52%), Positives = 261/396 (65%), Gaps = 18/396 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+HWPFC+ KCPYCDFNS+VR   V Q  F  +F  E+       GPR I+SIF 
Sbjct: 2   KPFGIYIHWPFCMSKCPYCDFNSYVRINGVDQSRFANAFEREITTQAHEIGPRRITSIFI 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ PQ +  +L  +AKNWT+   VEIT+EANPSSVE N F+GY  AGVNR+SLG
Sbjct: 62  GGGTPSLMTPQTVDRLLQAVAKNWTIDDKVEITLEANPSSVEANRFRGYHLAGVNRLSLG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ+L +++L+ LGR HNA +A+ AI+LAR IFPR+SFDLIYA PKQT+ QW+ EL +A++
Sbjct: 122 VQALNDKALQQLGRLHNAKQALHAINLARKIFPRLSFDLIYARPKQTLKQWKSELLQAIN 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A DHLSLYQLTIE GT F K+H  G L+LP+   A +LY LTQ IT+ HGL AYEISNH
Sbjct: 182 LATDHLSLYQLTIEDGTTFKKLHAAGKLILPASEQAANLYTLTQEITTMHGLPAYEISNH 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRV------------------KVGSHRVAISIE 298
           +  GAES HNL YWRY +Y G GPGAH R                       +R     E
Sbjct: 242 AIPGAESCHNLLYWRYHEYAGFGPGAHGRFIKQSLKNSSLFSEKLPSKTENHNRYVTINE 301

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHPE+WL++V   GH  +  E LS EQQA+E L+MGLRL EG+ +  +E L  ++L  + 
Sbjct: 302 KHPENWLELVETTGHGCINTEHLSREQQANEMLLMGLRLTEGLDLIRYETLNRQSLSSKK 361

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +LQ+QG +E      L+ T +G   LD +I  LA
Sbjct: 362 LIHLQQQGLVEITDNKHLKATIKGRIFLDHIIYQLA 397


>gi|319403535|emb|CBI77116.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           rochalimae ATCC BAA-1498]
          Length = 399

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 204/397 (51%), Positives = 261/397 (65%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNS+VR   V Q  F  +F  E+    +  GPR I+SIF
Sbjct: 2   TKPFGIYIHWPFCTSKCPYCDFNSYVRINGVDQPRFANAFEREITTQAKEIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AKNWT+    EIT+EANPSSVE N F+GY+ AGVNR+SL
Sbjct: 62  IGGGTPSLMAPQTVDRLLQAVAKNWTIDDKAEITLEANPSSVEANRFRGYQLAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++L+ LGR HN  +A+ AI+LAR IFPR+SFDLIYA PKQT+ QWE EL +A+
Sbjct: 122 GVQALNDKALQQLGRLHNVKQALHAINLAREIFPRLSFDLIYARPKQTLKQWETELLQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A DHLSLYQLTIE GT F K+H  G L+LP+   A +LY LTQ IT+ +GL AYEISN
Sbjct: 182 NLAADHLSLYQLTIEDGTTFKKLHAAGKLILPASEQAANLYTLTQEITTMYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV------------------KVGSHRVAISI 297
           H+  GAES HNL YWRY +Y G GPGAH R                        R     
Sbjct: 242 HAIPGAESCHNLLYWRYHEYAGFGPGAHGRFIKQSLKNSSFFSETFPSKIENHSRYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE+WL++V   GH  ++ E LS EQQA+E L+MG+RL EG+ +  +E L+ ++L  +
Sbjct: 302 EKHPENWLELVETKGHGCIDTEHLSQEQQANEMLLMGMRLSEGLDLARYETLSCQSLSRK 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               LQ+QG IE      L+ T  G  +LD +I  LA
Sbjct: 362 KLIRLQQQGLIEITDKQHLKATTTGRILLDHIIGQLA 398


>gi|49473731|ref|YP_031773.1| coproporphyrinogen III oxidase [Bartonella quintana str. Toulouse]
 gi|49239234|emb|CAF25554.1| Oxygen-independent coproporphyrinogen III oxidase [Bartonella
           quintana str. Toulouse]
          Length = 399

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 206/397 (51%), Positives = 264/397 (66%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+++F  E++      GPR I+SIF
Sbjct: 2   NEPFGIYIHWPFCAAKCPYCDFNSHVRVHGVDQPRFVKAFKREIETQYHKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ +  +L  +AK WTV    EIT+EANPSSVE N F GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMTPQTVDALLQALAKTWTVDDKAEITLEANPSSVEANRFYGYRAAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +++LR LGR H+  +A+ AI LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GVQALNDKALRQLGRLHDVKQALHAIVLAREIFPRLSFDLIYARPEQTLEQWKCELFQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F ++H  G L+LP   +A +LY+LTQ +T+ HGL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTAFKRLHAAGRLILPESELAANLYHLTQEMTALHGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------------------GSHRVAISI 297
           H+  GAES HNL YWRY +Y G GPGAH R                        R     
Sbjct: 242 HAIPGAESAHNLLYWRYHEYAGFGPGAHGRFIERSTNHFSPFLKSSSSQIKNRERSVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           EKHPE WL++V   GH  VE E L+  QQA+E L+MGLRL EG+ +  +E L  ++L IE
Sbjct: 302 EKHPEYWLELVETKGHGCVETEQLTPLQQANEMLLMGLRLCEGLDLTRYETLTSKSLPIE 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              NL+ QG +E +   RL+ T +G  +LD +I+ LA
Sbjct: 362 KLINLKHQGLVETIGHQRLKATAKGRILLDHIISQLA 398


>gi|149204372|ref|ZP_01881339.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
 gi|149142257|gb|EDM30304.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
          Length = 395

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 180/377 (47%), Positives = 249/377 (66%), Gaps = 4/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q  +  ++LTE+     L   R ++++FFGG
Sbjct: 20  FGLYLHWPFCEAKCPYCDFNSHVAR-HIDQSRWCAAYLTEIDRYAALLPGRVLNTVFFGG 78

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A I++ I  +W ++++ EIT+EANP SVE   F+ + +AG++RIS+G+Q
Sbjct: 79  GTPSLMAPETVAAIIERIKHHWPMANDPEITLEANPGSVEAGRFRAFAQAGISRISMGIQ 138

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+A+EA  A  +AR  F R+SFDLIYA   QT+  W+ EL+ ALS A
Sbjct: 139 ALNDTDLKRLGRIHSAAEARQAFDIARENFERVSFDLIYARQDQTLDSWKTELRSALSMA 198

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F   +  G L  LP +++A ++Y  TQ I ++ GL AYE+SNH+
Sbjct: 199 VDHLSLYQLTIESGTAFGDRYAAGKLRGLPEDDIAAEMYETTQEICASAGLPAYEVSNHA 258

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HNL YWRYGDYIGIGPGAH R+     + A    + P  WL+ V  +G  +  
Sbjct: 259 RAGAESRHNLIYWRYGDYIGIGPGAHGRITHNGQKYATEAHRAPGKWLESVENSG-VIET 317

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E LS   QA E+L+MGLR+ +GI    +E LAG+ LD     +L   G IE    +RLR
Sbjct: 318 RERLSGPDQAVEYLLMGLRITDGIDPARFERLAGKPLDPAAVDHLVSIGMIE-THDTRLR 376

Query: 378 CTQRGMTMLDSVIANLA 394
            T+ G  +L++VI +L 
Sbjct: 377 ATRSGRAVLNAVIRDLL 393


>gi|170749348|ref|YP_001755608.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655870|gb|ACB24925.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 391

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 193/380 (50%), Positives = 252/380 (66%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHVRR  V +  F+ +F  E+      T  R+++SIF
Sbjct: 12  DAGFGIYLHWPFCAAKCPYCDFNSHVRRAGVDEPRFLAAFRAEIAHNAARTPGRTVTSIF 71

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL++P  +A +LD +A +W V+ + E+T+EANPSSVE   F GYR AGVNR+SL
Sbjct: 72  LGGGTPSLMQPATVAGLLDAVAAHWAVAPDAEVTLEANPSSVEAGRFHGYRAAGVNRVSL 131

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L++ SLR LGR H+ ++A+ AI LA++ F R SFDLIYA P QT   W  EL  AL
Sbjct: 132 GIQALDDASLRTLGRLHDTAQALDAIALAQSAFARTSFDLIYARPGQTPALWRAELAEAL 191

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A +HLSLYQLTIE GT F+ +   G LV P + V   LY++TQ + +  GL AYEISN
Sbjct: 192 ARAAEHLSLYQLTIEPGTPFHGLAAAGKLVTPDDEVGRALYDVTQDLCARAGLPAYEISN 251

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  GAES HNL YWRYG+Y GIGPGAH R+     R+    E+ PE+WL  V   GH +
Sbjct: 252 HARPGAESRHNLLYWRYGEYAGIGPGAHGRLVTPGGRLGTVTERSPEAWLARVEAEGHGI 311

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE E L++  QADEFL+MGLRLREGI    +  L GR L+      L   G +ER+   R
Sbjct: 312 VETEILTAADQADEFLVMGLRLREGIDPDTYAALKGRPLNGNRIGMLIGDGLLERLPGGR 371

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  +L++++A LA 
Sbjct: 372 IAATARGAPVLNALVAELAA 391


>gi|163867355|ref|YP_001608549.1| coproporphyrinogen III oxidase [Bartonella tribocorum CIP 105476]
 gi|161016996|emb|CAK00554.1| oxygen-independent coproporphyrinogen III oxidase [Bartonella
           tribocorum CIP 105476]
          Length = 399

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 203/397 (51%), Positives = 268/397 (67%), Gaps = 18/397 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR + V Q  F+ +F  E++      GPR I+SIF
Sbjct: 2   NEPFGIYIHWPFCTAKCPYCDFNSHVRIHGVDQPRFVSAFEREIETQYHKIGPRHITSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+EPQ +  +L  +A+ W +   VEIT+EANPSSVE   F+GYR AGVNR+SL
Sbjct: 62  IGGGTPSLMEPQTVDALLQALARKWILDDKVEITLEANPSSVEAERFRGYRAAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +++LR LGR HN  +A+ AI LAR IFPR+SFDLIYA P+QT+ QW+ EL +A+
Sbjct: 122 GIQALNDKALRKLGRLHNVEQALYAIDLARQIFPRLSFDLIYARPEQTLEQWKSELIQAI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A DHLSLYQLTIE+GT F ++H  G L+LP      DLY+LTQ IT+ +GL AYEISN
Sbjct: 182 DLAADHLSLYQLTIEEGTAFKRLHDAGRLILPPSEQTADLYHLTQEITALYGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAIS----------------I 297
           H+  GAES HNL YWRY  Y G GPGAH R    + ++  A S                 
Sbjct: 242 HAMPGAESAHNLLYWRYHQYAGFGPGAHGRFIENIPNYSSAFSKTSLSHFENHERYVTIN 301

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           E+HPE WL++V K GH  +E E L++EQQA+E L+MGLRL EG+ +  +E L+ + + +E
Sbjct: 302 ERHPEQWLELVEKTGHGCIETERLTTEQQANEMLLMGLRLCEGLELTRYETLSSKRIPME 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +LQ+Q  +E V   RL+ T +G  +LD +I+ LA
Sbjct: 362 KLIDLQQQELVEMVNNQRLKATTKGRIVLDHIISQLA 398


>gi|302877639|ref|YP_003846203.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
 gi|302580428|gb|ADL54439.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
          Length = 394

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 139/395 (35%), Positives = 220/395 (55%), Gaps = 10/395 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S    ++       L +Y+H P+CVKKCPYCDFNSH  R    ++ ++ + + +++   
Sbjct: 4   VSLISKSVAFTALPPLSLYIHVPWCVKKCPYCDFNSHEARGGFSEKEYVDALIRDLEMAL 63

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R + ++FFGGGTPSL+  + I  IL  +     +S + EIT+EANP +VE   F 
Sbjct: 64  PQIWGRKVYTVFFGGGTPSLLSGEAITEILRQVRMLLPLSGDAEITLEANPGTVEAAKFA 123

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
            +R AGVNR+S+G+QS  +  L+ LGR H A EA AAI +A+  F  ++ DL+YALPKQT
Sbjct: 124 AFRDAGVNRLSMGIQSFNDTHLQALGRIHTADEAKAAIDIAQLHFDNINLDLMYALPKQT 183

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   ++Q AL++   HLS Y LT+E  TLFY+        LP ++ + D+    +++ 
Sbjct: 184 LDQALQDVQTALTFKPQHLSAYHLTLEPNTLFYRNPP----SLPDDDASADMQQAIEALL 239

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           + +G   YE S  +     S HNLNYW++GDY+GIG GAHS++      V  +  K P++
Sbjct: 240 AENGYQHYETSAFAQPNRRSRHNLNYWKFGDYLGIGAGAHSKLSFPDKIVREARYKQPQA 299

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL- 362
           +++ V   G  V  +  +S ++   EF+M  LRL EG     +      +L I  +R L 
Sbjct: 300 YMQQV-ALGAPVQTEHEVSRDEIPFEFMMNALRLNEGFDAALFCERTSLSL-ISIQRELL 357

Query: 363 --QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +++G + R    R+  T +G   L+ ++     
Sbjct: 358 DAEKRGLLSR-DIQRIAPTLQGQRFLNDLLEIFLA 391


>gi|259417573|ref|ZP_05741492.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter sp. TrichCH4B]
 gi|259346479|gb|EEW58293.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter sp. TrichCH4B]
          Length = 384

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 183/380 (48%), Positives = 249/380 (65%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  ++ ++ +E++ M +L   R ++SIF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVVS-QIDQSAWVTAYQSELRRMGELLPDRLLNSIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A +++   +NWT ++++EI++EANP SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVAAVIEAARENWTFANDIEISLEANPGSVEAGRFAGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H   EA  A  +ARN F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 125 GIQALNDDDLRRLGRIHTVDEARTAFDVARNCFDRVSFDLIYARQGQTLEAWKAELSEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP+++ A D+Y  TQ I  A+GL  YEIS
Sbjct: 185 SMAIDHLSLYQLTIEDGTAFGDRYARGKLRDLPTDDNAADMYLATQDICDAYGLPGYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HN  YWRYGDY+G+GPGAH R+ +   R A    + P +WL  V+K G  
Sbjct: 245 NHARPGAESRHNQIYWRYGDYVGVGPGAHGRITLNGQRYATEAPRAPGAWLDAVKK-GQG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           ++  E L  E Q  E +MMG+RL EG+ ++  E LAG+ L ++  + L   G I  V  +
Sbjct: 304 LLPFEILKPEDQVVEHMMMGMRLFEGLDLERHEALAGKPLSVKRIQELTDWGMIV-VDGA 362

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T +G  +L++V+  L 
Sbjct: 363 RLRATSQGRAVLNAVLRELL 382


>gi|126738499|ref|ZP_01754204.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
 gi|126720298|gb|EBA17004.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
          Length = 384

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 181/381 (47%), Positives = 250/381 (65%), Gaps = 4/381 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   K+ QE + +++L E++        R ++SIF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVS-AKIDQEIWAKAYLAELERNAPALDGRVLNSIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  +++  AK W  ++++EI++EANP SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVTTVIEAAAKIWPFANDIEISLEANPGSVEAGRFAGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L ++ LR LGR H+ +EA AA  +ARN F R+SFDLIYA   Q +  W+ EL  AL
Sbjct: 125 GIQALNDEDLRRLGRIHSVAEARAAFDIARNCFDRVSFDLIYARQGQDLRHWQAELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE+GT F   +  G L  LP+++ A D+Y  TQ I  AHG+ AYE+S
Sbjct: 185 SMAIDHLSLYQLTIEEGTAFGDRYARGKLRDLPTDDTAADMYQATQDICDAHGMPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY+GIGPGAH RV +   + A    K P  WL  +RK G  
Sbjct: 245 NHAREGAESRHNLIYWRYGDYLGIGPGAHGRVTLAGRKYATETHKAPGKWLDQIRK-GSG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +E L+   Q+ E++MM +RL EG+ +  ++ L+G  L  E  ++L   G +  +   
Sbjct: 304 ESLREELTFVDQSIEYMMMSMRLSEGMDIPRYQQLSGSELPAERVQDLVNLGMVT-ISDQ 362

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+R T +G ++L++V+  L V
Sbjct: 363 RIRATAQGRSVLNAVLRELLV 383


>gi|71909464|ref|YP_287051.1| coproporphyrinogen III oxidase [Dechloromonas aromatica RCB]
 gi|71849085|gb|AAZ48581.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Dechloromonas aromatica RCB]
          Length = 399

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 136/391 (34%), Positives = 212/391 (54%), Gaps = 8/391 (2%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           +  +++  + S  L +YVH P+CV+KCPYCDFNSH     + +  ++ + + ++Q    L
Sbjct: 15  SVSSSLEFRVSPPLALYVHVPWCVQKCPYCDFNSHEANGTIPEREYVDALIADLQSALPL 74

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + S+FFGGGTPSL+ P  +  ++        ++ + EIT+EANP +VE   F G+
Sbjct: 75  IWGRPVVSVFFGGGTPSLLSPAAVDELIATFRALAMLAPDAEITLEANPGTVEAEKFAGF 134

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           R AGVNR+SLG+QS  ++ L+ LGR H A EA  A  LA   F   + DL+Y LP QT  
Sbjct: 135 RSAGVNRLSLGIQSFNDEHLQALGRIHGAEEAKRAAQLAGEHFDSFNLDLMYGLPGQTHE 194

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +++ ALS++  HLS YQLT+E  T F          LP  ++  D+    ++  +A
Sbjct: 195 QALSDVETALSFSPSHLSCYQLTLEPNTRFAAFPP----ELPESDICADMQESIEARLAA 250

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +  G +  HNLNYW +GDY+GIG GAHS++ +    +     KHP+++L
Sbjct: 251 AGFSNYETSAFAQRGKQCKHNLNYWYFGDYLGIGAGAHSKLTLHDRVLRQMRWKHPKAYL 310

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
           + +R  GHAV E   +       EF+M  LRL +G     +E    ++L+      +  +
Sbjct: 311 ENIRS-GHAVQEDNQVEVASLPFEFMMNALRLADGFHPSLFEARTAQSLNRVLPQMKAAE 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             G +  V   ++  T +G   L+ ++    
Sbjct: 370 SDGLL-IVGPEKIAPTAKGRRFLNVLLERFL 399


>gi|27375783|ref|NP_767312.1| coproporphyrinogen III oxidase [Bradyrhizobium japonicum USDA 110]
 gi|27348921|dbj|BAC45937.1| oxygen-independent coproporphyrinogen III oxidase [Bradyrhizobium
           japonicum USDA 110]
          Length = 373

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 193/372 (51%), Positives = 251/372 (67%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           HWPFC+ KCPYCDFNSHVR   + +  F  +F  E++   Q    R ++SIF GGGTPSL
Sbjct: 2   HWPFCLSKCPYCDFNSHVRHAAIDEARFASAFAREIETTAQRAPGREVTSIFLGGGTPSL 61

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++P  +  +LD I K+W V+ +VE+T+EANP+SVE   F GYR AGVNR+SLGVQ+L++ 
Sbjct: 62  MQPATVGAVLDSIGKHWQVARDVEVTLEANPTSVEATRFAGYRAAGVNRVSLGVQALDDA 121

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           SL+ LGR H+A EA+ A+ +AR  F R SFDLIYA P QT   W  EL+ A++ A +HLS
Sbjct: 122 SLKALGRMHSAREALDAVAIARRSFERYSFDLIYARPDQTPAMWADELRLAIAEAAEHLS 181

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLTIE+GT F+ +H+ G L  P E VA  LY++TQ      GL AYEISNH+  GAE 
Sbjct: 182 LYQLTIEEGTPFFGLHQAGKLKTPDEAVARALYDVTQETCDKLGLPAYEISNHARRGAEC 241

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
            HNL YWR  +Y GIGPGAH R+ +   R A + EK PE+WL  V  NGH VV  + L+S
Sbjct: 242 RHNLVYWRGDEYAGIGPGAHGRLDIDGIRHATATEKRPEAWLLRVETNGHGVVTDDLLNS 301

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
           E++ADEFL+MGLRL EGI  + +  L+GR LD +    L+ +G I      RLR T  G 
Sbjct: 302 EERADEFLLMGLRLAEGIDPERYTALSGRALDPKRIALLREEGAITVDATGRLRVTSSGF 361

Query: 384 TMLDSVIANLAV 395
            +LD+V+A+LA 
Sbjct: 362 PVLDAVVADLAA 373


>gi|209966228|ref|YP_002299143.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Rhodospirillum centenum SW]
 gi|209959694|gb|ACJ00331.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Rhodospirillum centenum SW]
          Length = 387

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 183/389 (47%), Positives = 246/389 (63%), Gaps = 6/389 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M+        +YVHWPFC  KCPYCDFNSHV R  + QE +  + L E+     L   R 
Sbjct: 1   MSVPSDPGFALYVHWPFCASKCPYCDFNSHV-REGIDQERWRAALLRELDHFAALAPGRR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++S+FFGGGTPSL+ P  +  +L     +W + +  E+T+EANP+SVE   F+ +R AGV
Sbjct: 60  LTSVFFGGGTPSLMAPATVEALLRRADGHWGLPAGTEVTLEANPTSVEAGRFRDFRAAGV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L++  LR LGR H+A+EA+ AI LAR  F R SFDLIYA P QT+  W+ E
Sbjct: 120 NRVSLGIQALDDADLRRLGRRHSAAEALGAIRLARAAFDRFSFDLIYARPGQTVAAWKQE 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RAL  AV HLSLYQLTIE+GT F+ +H+ G+LVLP E+   +LY  TQ++  A GL A
Sbjct: 180 LARALDEAVGHLSLYQLTIEEGTQFHTLHERGELVLPDEDTQGELYEETQALLEAAGLPA 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  G ES HNL YWRYGDY+G+GPGAH R+ +   +V     + P+ WL+ V +
Sbjct: 240 YEVSNHARPGEESRHNLTYWRYGDYVGVGPGAHGRLTLTQGKVGTRTHRAPDIWLERVER 299

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQG 366
           +G A    E +  +++  E LMMGLRLREG+ +      +GR     LD +    L+R G
Sbjct: 300 DGTAAKPFEPIGPQERLVELLMMGLRLREGVPLDRIAAESGRPAAQALDPDRLDGLRRHG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +E     RLR T  G T L+ V+  L  
Sbjct: 360 LLETAD-GRLRATAEGRTRLNGVLRALLA 387


>gi|220920080|ref|YP_002495381.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
 gi|219944686|gb|ACL55078.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
          Length = 387

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 189/377 (50%), Positives = 254/377 (67%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+HWPFC  KCPYCDFNSHVR     +  +  +F  E+  +  LT  R+++SIFFGG
Sbjct: 11  FGVYLHWPFCAAKCPYCDFNSHVRHAPPDEAVWRAAFAREIAHVSALTPGRTVTSIFFGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +  +LD +A  W++S + EIT+EANP+SVE   F+GYR AGVNR+SLGVQ
Sbjct: 71  GTPSLMQPATVGALLDAVAGAWSLSPDAEITLEANPTSVEAERFRGYRLAGVNRVSLGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL+ LGR H+A+EA+AA+  A   F R SFDLIYA P QT   W  EL+ A++ A
Sbjct: 131 ALDDASLKRLGRLHSAAEALAAVATAARHFERYSFDLIYARPDQTQAAWAAELREAIARA 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE+GT F+ +   G LV P E+ A  L+++TQ + +A GL AYEISNH+ 
Sbjct: 191 AEHLSLYQLTIEEGTPFHGLAAAGKLVTPDEDAARALFDVTQEVCAAAGLPAYEISNHAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWRYG+Y GIGPGAH R+ +   R     E+ PE+WL  V ++GH +V  
Sbjct: 251 PGAESRHNLLYWRYGEYAGIGPGAHGRLVLPEGRTGTVTERVPEAWLARVARDGHGIVTM 310

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L   ++ADEFL+MGLRL EGI    +  LAGR +D      L ++G I      R+  
Sbjct: 311 EPLKPAEEADEFLLMGLRLAEGIDPARFAALAGRPIDRGRLDALVQEGLIALTGSGRIAA 370

Query: 379 TQRGMTMLDSVIANLAV 395
           T +G  +L++++A LA 
Sbjct: 371 TPKGAPVLNALVAELAA 387


>gi|148550176|ref|YP_001270278.1| coproporphyrinogen III oxidase [Pseudomonas putida F1]
 gi|148514234|gb|ABQ81094.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas putida F1]
          Length = 391

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 209/380 (55%), Gaps = 10/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L GI +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSANALGRLLRGIEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLEALGRIHNGDEAVRAADMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMAEHGYRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+      + P+ +L + +      
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKPFK--- 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-RNLQRQGFIERVQFS 374
             ++ L  ++   EFLM  LRL +G+  + +    G  L    E R    Q  + +V+  
Sbjct: 311 AGEKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLSQLQEARPAAEQKGLLQVEPD 370

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T RG   L+ ++    
Sbjct: 371 RLVATPRGQLFLNDLLQYFL 390


>gi|99082710|ref|YP_614864.1| coproporphyrinogen III oxidase [Ruegeria sp. TM1040]
 gi|99038990|gb|ABF65602.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Ruegeria sp. TM1040]
          Length = 384

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 181/380 (47%), Positives = 249/380 (65%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  ++ ++  E++ M +L   R ++SIF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVVS-QIDQSAWVTAYQAELRRMGELLPDRLLNSIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A +++   +NWT ++++EI++EANP SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVAAVIEAARENWTFANDIEISLEANPGSVEAGRFAGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L ++ LR LGR H+  EA  A  +ARN F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 125 GIQALNDEDLRRLGRIHSVEEARKAFDVARNCFDRVSFDLIYARQGQTLNAWKAELSEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP+++ A D+Y  TQ I   +GL  YEIS
Sbjct: 185 SMAIDHLSLYQLTIEDGTAFGDRYARGKLRDLPTDDHAADMYLATQEICELYGLPGYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY+GIGPGAH R+ +   R A    + P +WL  V + G+ 
Sbjct: 245 NHARPGAESRHNLIYWRYGDYVGIGPGAHGRITLNGTRFATEAPRAPGAWLSAVEQ-GNG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           ++  + L+SE Q +E +MMGLRL EG+ +     LA + L     + L   G ++ +  S
Sbjct: 304 LLPFDALNSEDQVNEHMMMGLRLFEGVDLDRHTALAQKPLSPSKIQELCNLGMLD-LDGS 362

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T +G  +L++V+  L 
Sbjct: 363 RLRATSQGRAVLNAVLRELL 382


>gi|89052695|ref|YP_508146.1| coproporphyrinogen III oxidase [Jannaschia sp. CCS1]
 gi|88862244|gb|ABD53121.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Jannaschia sp. CCS1]
          Length = 385

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 179/381 (46%), Positives = 248/381 (65%), Gaps = 3/381 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  +++++L+E+  +      R++ S+F
Sbjct: 7   AGGFGLYVHWPFCEAKCPYCDFNSHVS-ARIDQGAWLKAYLSELDRVAAELPNRTLGSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P ++A I++ + + W VS+++E+T+EANPSSVE   F GY+ AGVNR+S+
Sbjct: 66  FGGGTPSLMAPDSVASIIEAVRRLWPVSNDLEVTLEANPSSVEAGRFAGYKDAGVNRVSV 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L++  L+ LGR H+  EA AAI +AR  F RMSFDLIYA   Q++  W  EL +AL
Sbjct: 126 GVQALDDVDLKRLGRLHSVKEAYAAIDVARAHFERMSFDLIYARQDQSLAAWRTELTQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLSLYQLTIE GT F   H  G L  LP E+++ D+Y+LTQ +  A GL AYE+S
Sbjct: 186 NLAADHLSLYQLTIEPGTAFGTRHAKGGLRGLPEEDLSADMYDLTQDLCGAAGLPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+   A+S HNL YW  GDY GIGPGAH RV +   R        P++WL  V K+G  
Sbjct: 246 NHAADFAQSRHNLVYWHAGDYAGIGPGAHGRVTLAGRRYGTETYLQPQAWLDAVGKSGSG 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             ++  LS+ +QA+E+LMM LRL EG     +E L G+ LD    R+L   G IE     
Sbjct: 306 ESDRTALSAREQAEEYLMMSLRLTEGSDPARYEALNGQPLDPVKIRDLVDLGLIEST-PE 364

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R++ T  G  +L+ ++ +L  
Sbjct: 365 RIKATACGRPVLNGILRDLLA 385


>gi|94309795|ref|YP_583005.1| coproporphyrinogen III oxidase [Cupriavidus metallidurans CH34]
 gi|93353647|gb|ABF07736.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           [Cupriavidus metallidurans CH34]
          Length = 419

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 215/382 (56%), Gaps = 13/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQLTGPR 69
           GS  L +YVH P+CV+KCPYCDFNSH        +++ ++ ++ +   +++    L   R
Sbjct: 37  GSPPLSLYVHIPWCVRKCPYCDFNSHAAPGKPDSHEIPEDAYLDALRADLEQSLPLVWGR 96

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  YR +G
Sbjct: 97  PVHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEANPGTFEAERFASYRASG 156

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+S+G+QS  +  L+ LGR H   EA AAI +A   F  ++ DL+YALP QT+ +   
Sbjct: 157 INRLSIGIQSFNDAHLKALGRIHGEREARAAIDIALKHFDNVNLDLMYALPGQTLDECAR 216

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L  ALSY   HLSLY LT+E  TLF K        LP E+ A ++ ++ ++ T+  G  
Sbjct: 217 DLDAALSYGTTHLSLYHLTLEPNTLFAKFPP----ALPDEDTAYEMQDIVEARTAQAGYR 272

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE S ++    E+ HNLNYWR+GDY+GIG GAH ++   +  +     KHP ++++   
Sbjct: 273 HYETSAYAKPHREARHNLNYWRFGDYLGIGAGAHGKLSFPNRILRQMRHKHPATYMEQAL 332

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGF 367
             G+AV E   + +++   EF++  LRL +G+    +    G  L +  +     +++G 
Sbjct: 333 A-GNAVQEAREVGADELPFEFMLNALRLTDGVPASSFHDYTGLPLHMIGKQLAAAEKKGL 391

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           ++    + ++ T+ G   L+ +
Sbjct: 392 LD-ADPTVIKPTELGRRFLNDL 412


>gi|83950769|ref|ZP_00959502.1| coproporphyrinogen III oxidase [Roseovarius nubinhibens ISM]
 gi|83838668|gb|EAP77964.1| coproporphyrinogen III oxidase [Roseovarius nubinhibens ISM]
          Length = 385

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 186/377 (49%), Positives = 253/377 (67%), Gaps = 4/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+YVHWPFC  KCPYCDFNSHV    + Q+ +++S+L E++    L   R ++SIFFGG
Sbjct: 10  FGIYVHWPFCQSKCPYCDFNSHVT-ASIDQDAWLESYLAEIKRYSDLLPGRVVNSIFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +  ++D I K WT++++VEIT+EANP SVE   F GYR+AGVNRIS+G+Q
Sbjct: 69  GTPSLMQPHVVGGVIDAIGKGWTLANDVEITLEANPGSVEAGRFLGYREAGVNRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR H+ SEA+ A  +AR+ F R+SFDLIYA   QT+  WE EL RAL+YA
Sbjct: 129 ALNDPDLRRLGRLHSVSEALQAFDVARSTFSRVSFDLIYARQDQTLADWEAELTRALTYA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE+GT F   +  G L  LP+++ A D+Y+LTQ+I + HG+ AYEISNH+
Sbjct: 189 VDHLSLYQLTIEQGTAFGDRYNRGLLKGLPADDSAADMYDLTQTICADHGMPAYEISNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDY+GIGPGAH R+ VG  + A    + P  WL  V+       +
Sbjct: 249 GPGAQSRHNLIYWRYGDYVGIGPGAHGRITVGGRKFATEAHRAPGKWLAEVKNGSGDSAK 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E +   +Q  E+L+M LRL EG+    +  LA R+   +    L+  G I       LR
Sbjct: 309 NEVIGP-EQGLEYLLMCLRLTEGLDRDRYRTLAQRDFAPDTLAELRDMGMIV-ADDQNLR 366

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G  +L++++A LA
Sbjct: 367 LTEKGRPVLNAILAELA 383


>gi|83953081|ref|ZP_00961803.1| coproporphyrinogen III oxidase [Sulfitobacter sp. NAS-14.1]
 gi|83842049|gb|EAP81217.1| coproporphyrinogen III oxidase [Sulfitobacter sp. NAS-14.1]
          Length = 385

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 171/377 (45%), Positives = 246/377 (65%), Gaps = 4/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q  +  ++L E++     T  R ++++FFGG
Sbjct: 10  FGLYIHWPFCEAKCPYCDFNSHVSR-TIDQRAWRDAYLAELERGAAETQGRVLNAVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A ++  I + W  ++++EIT+EANP SVE + F  +R+AGVNRIS+G+Q
Sbjct: 69  GTPSLMDPDVVADVIAAIRRLWPTANDLEITLEANPGSVEADRFAAFRQAGVNRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L    L+ LGR H   E +AA  +ARN F R+SFDLIY    Q++  W+ EL++ALS A
Sbjct: 129 ALNVADLKRLGRIHTVDEGLAAFDIARNTFERVSFDLIYGRQNQSLPDWKAELKQALSLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LPS+++  D+Y  TQ I    G+ +YE+SNH+
Sbjct: 189 IDHMSLYQLTIEQGTAFGDRYAVGKLRGLPSDDLGADMYAATQDICGEMGMPSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDY+GIGPGAH R+    +R A     +P+ WL     +G     
Sbjct: 249 RDGAQSRHNLIYWRYGDYLGIGPGAHGRLTQNGNRFATECFSNPKRWLDA-AASGATEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L++E Q  EFLMMGLRL+EG+ ++ +E L+G  L  +    +Q  G I R    +L 
Sbjct: 308 RELLTTEDQGSEFLMMGLRLKEGVDLRRYEALSGAPLSTKKITQMQDIGMISR-DKDQLY 366

Query: 378 CTQRGMTMLDSVIANLA 394
            T +G  +L++++A L 
Sbjct: 367 VTDQGFMVLNAILAELL 383


>gi|83942032|ref|ZP_00954494.1| coproporphyrinogen III oxidase [Sulfitobacter sp. EE-36]
 gi|83847852|gb|EAP85727.1| coproporphyrinogen III oxidase [Sulfitobacter sp. EE-36]
          Length = 385

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 171/377 (45%), Positives = 243/377 (64%), Gaps = 4/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q  +  ++L E++     T  R ++++FFGG
Sbjct: 10  FGLYIHWPFCEAKCPYCDFNSHVSR-TIDQRAWRDAYLAELERGAAETQGRVLNAVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A ++  I + W  ++++EIT+EANP SVE   F  +R+AGVNRIS+G+Q
Sbjct: 69  GTPSLMDPDVVADVIAAIRRLWPTANDLEITLEANPGSVEAVRFAAFRQAGVNRISMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H   E +AA  +ARN F R+SFDLIY    Q +  W  EL++ALS A
Sbjct: 129 ALNDADLKRLGRIHTVDEGLAAFDIARNTFERVSFDLIYGRQNQGLADWRTELKQALSLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LPS+++  D+Y  TQ I    G+ +YE+SNH+
Sbjct: 189 IDHMSLYQLTIEQGTAFGDRYAVGKLRGLPSDDLGADMYAATQDICGEMGMPSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDY+GIGPGAH R+    +R A     +P+ WL  V         
Sbjct: 249 RDGAQSRHNLIYWRYGDYLGIGPGAHGRLTQNGNRFATECFSNPKRWLDAVASGATEKP- 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L++E Q  EFLMMGLRL+EG+ ++ +E L+G  L  +    +Q  G I R    +L 
Sbjct: 308 RELLTTEDQGSEFLMMGLRLKEGVDLRRYEALSGAPLSTKKITQMQDIGMISR-DKDQLY 366

Query: 378 CTQRGMTMLDSVIANLA 394
            T +G  +L++++A L 
Sbjct: 367 VTDQGFMVLNAILAELL 383


>gi|253997757|ref|YP_003049820.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           SIP3-4]
 gi|253984436|gb|ACT49293.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           SIP3-4]
          Length = 405

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/392 (35%), Positives = 206/392 (52%), Gaps = 15/392 (3%)

Query: 8   ENNMTGQ-------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           EN + GQ           L +Y+H P+CV+KCPYCDFNSH  R  + +  ++ + + +++
Sbjct: 14  ENPLVGQLTSSGLRNPPPLSLYIHIPWCVRKCPYCDFNSHESRNPIPESAYVDALIADLE 73

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L   R + SIFFGGGTPSL   ++I  IL  +     +    EIT+EANP + E  
Sbjct: 74  QATPLVWGRKVRSIFFGGGTPSLFSAESIDRILSHVRMLTPLEYEAEITLEANPGTFEAE 133

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F GYR AGVNRIS+G+QS   + L+ LGR HN+ EA  A   A  IF  ++ DL+YALP
Sbjct: 134 RFAGYRDAGVNRISIGIQSFNPRHLQALGRIHNSEEAQYAAEHAIKIFGNVNLDLMYALP 193

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT+ +   ++  A++    H+S Y LT+E  T FY         LP ++ +  +    +
Sbjct: 194 EQTLEEALQDMHTAIALGPTHISAYHLTLEPNTPFYYKPP----ALPDDDTSATMQEAIE 249

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + + HG   YE S     G    HNLNYW +GDY+GIG GAHS++      +  S  K 
Sbjct: 250 HLLADHGYGHYETSAFGKAGKRCRHNLNYWVFGDYLGIGAGAHSKLSFHDRILRQSRIKQ 309

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IEC 358
           P +++K V +  H V E+  L       EF+M  LRL EG   K +  + G+ L      
Sbjct: 310 PNAYMKAVAEMSH-VEEERLLDRADLGFEFMMNALRLTEGFDPKLFTTMTGQALSTVDPA 368

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +  +++G I R     +  T  G   L+ ++
Sbjct: 369 LQQAEQRGLITRT-PELIAPTALGQRFLNELL 399


>gi|300690922|ref|YP_003751917.1| coproporphyrinogen dehydrogenase [Ralstonia solanacearum PSI07]
 gi|299077982|emb|CBJ50623.1| Coproporphyrinogen dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 424

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 215/387 (55%), Gaps = 12/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH      + +E F+ +   +++    +   R + +
Sbjct: 40  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEPGIPEERFLAAIRQDLEAALPMVWGRRVHT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+    +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 100 IFIGGGTPSLLSAHGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  LR LGR H+A+EA AAI LAR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 160 SIGIQSFNDAHLRALGRIHSAAEARAAIDLARAHFDNINLDLMFALPGQTLAECEADVEA 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +  G   YE+
Sbjct: 220 ALSFDTSHVSLYHLTLEPNTYFAKHPP----ALPDDDTAFAMQDWIHARLAGAGYEHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     KHPE++L+     G 
Sbjct: 276 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVIREMRHKHPETYLRQAETAGG 335

Query: 314 A--VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
           A  V E+  + +     EF++  LRL +G  V  ++   G  L    ER L   +++G +
Sbjct: 336 AAMVQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLRS-IERELDAAEQRGLL 394

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     +R T+ G   L+ + A    
Sbjct: 395 AR-DHVAIRPTELGQRFLNDLQALFLA 420


>gi|225075212|ref|ZP_03718411.1| hypothetical protein NEIFLAOT_00212 [Neisseria flavescens
           NRL30031/H210]
 gi|224953387|gb|EEG34596.1| hypothetical protein NEIFLAOT_00212 [Neisseria flavescens
           NRL30031/H210]
          Length = 391

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 128/375 (34%), Positives = 205/375 (54%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I +  T++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALFTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F          LP +  A+D+ +             YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEGADFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KPGMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLAAMQSNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ ++++    EF+M  LRL +G+     +   G      +      +++G +E    + 
Sbjct: 314 RKTVAAKDLPFEFMMNALRLTDGVPAAMLQERTGVPTAKIMAQIETARQKGLLE-SDPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T++G   L+ ++
Sbjct: 373 FRPTEQGRLFLNDLL 387


>gi|85706898|ref|ZP_01037988.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
 gi|85668509|gb|EAQ23380.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
          Length = 396

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 181/379 (47%), Positives = 244/379 (64%), Gaps = 8/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+YVHWPFC  KCPYCDFNSHV R ++ Q  +  ++L E+     L   R ++++FFGG
Sbjct: 20  FGLYVHWPFCEAKCPYCDFNSHVAR-EIDQTRWCTAYLAEIDRYAALVPGRVLNTVFFGG 78

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ IA +++ I  +W +++  EIT+EANP SVE   F+ + +AGV RIS+GVQ
Sbjct: 79  GTPSLMAPETIAALIERIKASWPMANAPEITLEANPGSVEAGRFRAFAEAGVTRISMGVQ 138

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+ +EA  A  +AR  F R+SFDLIYA   QT+  W+ EL+ AL+ A
Sbjct: 139 ALNDIDLKRLGRIHSVAEARQAFDIARENFDRVSFDLIYARQDQTLEAWKAELREALAMA 198

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F   +  G L  LP +  A D+Y  TQ I  A GL AYE+SNH+
Sbjct: 199 VDHLSLYQLTIETGTAFGDRYAAGKLRGLPEDETAADMYEATQEICDAAGLPAYEVSNHA 258

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G+ES HNL YWRYGDYIGIGPGAH R+     + A    + P  WL  V     A  E
Sbjct: 259 RPGSESRHNLIYWRYGDYIGIGPGAHGRITRNGQKHATEAHRAPGRWLDSVET---ASSE 315

Query: 318 KEF--LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           ++   LS + QA E+L+MGLR+ +GI    +E LAG+ L      +LQ+ G IE +  +R
Sbjct: 316 RKPVRLSGQDQAVEYLLMGLRISDGIDPGRFEKLAGQPLSPTVVDHLQQIGMIESL-GTR 374

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G  +L++VI +L 
Sbjct: 375 LRATRAGRAVLNAVIRDLL 393


>gi|254464716|ref|ZP_05078127.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacterales bacterium Y4I]
 gi|206685624|gb|EDZ46106.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacterales bacterium Y4I]
          Length = 384

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 176/380 (46%), Positives = 248/380 (65%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   K+ Q  +++++L+E+  + +    R +++IF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVS-AKIDQTLWVRAYLSELDRLSEHFSGRVLNTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A ++    + W  ++++EI++EANP SVE   F GYR AGVNR+S+
Sbjct: 65  FGGGTPSLMHPDTVAAVIARAREIWPFANDMEISLEANPGSVEAGRFAGYRDAGVNRVSM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L ++ LR LGR H+ +EA AA  +AR  F R+SFDLIY    QT+  W+ EL+ AL
Sbjct: 125 GIQALNDEDLRKLGRIHSVAEARAAFDIARECFDRVSFDLIYVRQGQTLEAWKAELKEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ +T+AHG+  YEIS
Sbjct: 185 SMAIDHLSLYQLTIEDGTAFGDRYARGKLRGLPEDDTAADMYLATQDLTAAHGMACYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY GIGPGAH R+ +G  R A      P +WL+  +  G+ 
Sbjct: 245 NHARPGAESRHNLIYWRYGDYAGIGPGAHGRLTLGGVRYATETHLAPGAWLQAAKA-GNG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L+ E  A E+LMMG+RL EG+ +  +  L+GR+L      +L   G +  +   
Sbjct: 304 ESLRVPLTREDAAAEYLMMGMRLSEGLDMVRFSQLSGRHLPESKLNDLVDLGMVT-ISEK 362

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T +G  +L++V+ +L 
Sbjct: 363 RLRATAQGRAVLNAVLRDLL 382


>gi|313199821|ref|YP_004038479.1| oxygen-independent coproporphyrinogen iii oxidase [Methylovorus sp.
           MP688]
 gi|312439137|gb|ADQ83243.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           MP688]
          Length = 405

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/392 (35%), Positives = 207/392 (52%), Gaps = 15/392 (3%)

Query: 8   ENNMTGQ-------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           EN + GQ           L +Y+H P+CV+KCPYCDFNSH  R  + +  ++ + + +++
Sbjct: 14  ENPLVGQLTSSGLRNPPPLSLYIHIPWCVRKCPYCDFNSHESRNPIPESTYVDALIADLE 73

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L   R + SIFFGGGTPSL   ++I  IL  +     +    EIT+EANP + E  
Sbjct: 74  QATPLVWGRKVRSIFFGGGTPSLFSAESIDRILSHVRMLTPLEYEAEITLEANPGTFEAE 133

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F GYR AGVNRIS+G+QS   + L+ LGR HN+ EA  A   A  IF  ++ DL+YALP
Sbjct: 134 RFAGYRDAGVNRISIGIQSFNPRHLQALGRIHNSEEAQYAAEHAIKIFGNVNLDLMYALP 193

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT+ +   +++ A++    H+S Y LT+E  T FY         LP ++ +  +    +
Sbjct: 194 EQTLEEALQDMRTAIALGPTHISAYHLTLEPNTPFYYKPP----ALPDDDTSATMQEAIE 249

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + + HG   YE S     G    HNLNYW +GDY+GIG GAHS++      +  S  K 
Sbjct: 250 HLLAEHGYSHYETSAFGKAGKRCRHNLNYWVFGDYLGIGAGAHSKLSFHDRILRQSRIKQ 309

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IEC 358
           P +++K V + GH + E+  L       EF+M  LRL EG     +  + G+ L      
Sbjct: 310 PNAYMKAVAETGH-IEEERLLDRSDLGFEFMMNALRLTEGFDPMLFTTMTGQALSTVEPA 368

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +  +++G I R     +  T  G   L+ ++
Sbjct: 369 LQQAEQRGLITRT-PELIAPTALGQRFLNELL 399


>gi|254475038|ref|ZP_05088424.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruegeria sp. R11]
 gi|214029281|gb|EEB70116.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruegeria sp. R11]
          Length = 384

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 180/381 (47%), Positives = 248/381 (65%), Gaps = 4/381 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV   ++ Q  + +++  E+         R +++IF
Sbjct: 6   NGGFGLYVHWPFCQAKCPYCDFNSHVT-ARIDQSKWAEAYRRELLRAAPQLSGRVLNTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A ++D   + W  S+++EI++EANP+SVE   F GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMHPDTVATVIDTAREIWPFSNDIEISLEANPTSVEAGRFVGYRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +  LR LGR H+ SEA AA  +ARN F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 125 GVQALNDDDLRRLGRMHSVSEARAAFDVARNCFDRVSFDLIYARQGQTIETWKAELNDAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   ++ G L  LPS++ A D+Y  TQ I  AHGL AYE+S
Sbjct: 185 SMAIDHLSLYQLTIEAGTAFGDRYERGTLRDLPSDDNAADMYLATQEICEAHGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY+G+GPGAH R+ +G  R A      P +W++ V  +G  
Sbjct: 245 NHARPGAESRHNLIYWRYGDYLGVGPGAHGRLTLGGDRYATETYLQPGAWMEAV-TSGSG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             ++  LS +  + EFLMMG+RL EG+ +  +  ++G++L  +   +L   G +E  +  
Sbjct: 304 EAQRTLLSKDDASAEFLMMGMRLVEGLDMGRYRNISGKDLPADRITHLVDIGMVE-TRGD 362

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           RL  T  G  +L++++  L V
Sbjct: 363 RLIATDDGRAVLNAILRELLV 383


>gi|260431970|ref|ZP_05785941.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415798|gb|EEX09057.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 384

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 181/380 (47%), Positives = 245/380 (64%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV R  + Q+ ++ ++L+E++     T  R +++IF
Sbjct: 7   NGGFGLYVHWPFCEAKCPYCDFNSHVSRN-IDQQQWLDAYLSELKRSAAETPDRVLNTIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A ++D     W  ++++EIT+EANP SVE   F  YR AGVNRIS+
Sbjct: 66  FGGGTPSLMAPETVAAVIDTARSLWRPANDMEITLEANPGSVEAGRFAAYRDAGVNRISM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++ ++ LR LGR H  +EA AA  +AR  F R+SFDLIYA   QT+  W  EL  AL
Sbjct: 126 GIQAMNDEDLRRLGRIHTVAEARAAFDIARTCFDRVSFDLIYARQYQTLEDWRAELTEAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S A+DHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ I  AHG+ AYE+S
Sbjct: 186 SMAIDHLSLYQLTIEAGTAFGDRYSVGKLRGLPEDDNAADMYLATQEICEAHGMPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDY+GIGPGAH R+ V   R+A      P +WL  V + G+ 
Sbjct: 246 NHAVPGAESRHNLIYWRYGDYVGIGPGAHGRITVNGQRIATETHLAPRAWLDAVAQ-GNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L+ ++Q+ E+LMM +RL EG+ +  +  LAGR+L       LQ  G I + +  
Sbjct: 305 EKLRVPLAPDEQSSEYLMMCIRLAEGLDIDRFHALAGRSLPQRKLDYLQEIGMITQQEN- 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T  G  +L++VI  L 
Sbjct: 364 RLAATADGRAVLNAVIRELL 383


>gi|56694934|ref|YP_165279.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
 gi|56676671|gb|AAV93337.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 180/380 (47%), Positives = 253/380 (66%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+YVHWPFC  KCPYCDFNSHV R ++ Q+ +++++++E++        R +++IF
Sbjct: 7   HGGFGLYVHWPFCQAKCPYCDFNSHVAR-EIDQKAWVRAYVSELERCAAELPGRVLNTIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A +++ + + W  S+++EIT+EANP SVE   F  YR  GVNRIS+
Sbjct: 66  FGGGTPSLMMPETVAAVIETVRRLWPTSNDMEITLEANPGSVEAGRFAAYRDGGVNRISM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ L  LGR H+ +EA AA  +AR  F R+SFDLIYA   QT   W  EL  AL
Sbjct: 126 GVQALNDRDLHRLGRIHSVAEARAAFDIARRCFERVSFDLIYARQDQTPEAWRAELNEAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + AVDHLSLYQLTIE GT F   +  G L  LP+++ A D+Y +TQ + + HGL AYE+S
Sbjct: 186 AMAVDHLSLYQLTIEDGTAFGDRYARGKLRGLPADDDAADMYLITQEVCATHGLPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  G+ES HNL YWRYGDY+GIGPGAH R+ V   R A     +P +WL  V K G  
Sbjct: 246 NHARPGSESRHNLIYWRYGDYVGIGPGAHGRITVDGQRFATESPLNPGAWLGAVAK-GSG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            + +  LS + QADE+LMMGLR+ EG+ +  +E L+ + L+     +L   G IE ++ +
Sbjct: 305 ELSRVALSLQDQADEYLMMGLRIAEGLDIHRYEALSPQPLNRNRLAHLTELGMIE-IEGT 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL+ T +G  +L++VI +L 
Sbjct: 364 RLKATAQGRAVLNAVILDLM 383


>gi|145589265|ref|YP_001155862.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047671|gb|ABP34298.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 392

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 130/389 (33%), Positives = 218/389 (56%), Gaps = 13/389 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV------GQENFIQSFLTEMQWM 62
           N +T      L +Y+H+P+C KKCPYCDFNSH  +          +  +I++ + +++  
Sbjct: 3   NPVTLSALPPLALYIHFPWCEKKCPYCDFNSHQIKDAKSSTNGFDEPRYIKALIADLETE 62

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                 R + S+F GGGTPSL+ P+ +  +L  +     +  + EIT+EANP SVE   F
Sbjct: 63  LPNIWGRQVHSVFIGGGTPSLLSPEGMDQLLSAVRARINLEPDAEITMEANPGSVEAEKF 122

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
             + K+G+NR+SLG+QS +++ L+ LGR HN +EA  A+ +A + F  ++ DL+Y LP Q
Sbjct: 123 AAFAKSGINRVSLGIQSFQDEQLKALGRIHNGAEAKRAVQIALDHFKSVNIDLMYGLPNQ 182

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +   + +++ ALS+   HLSLY LT+E  T F          LP+E V   +++    +
Sbjct: 183 NLDSAKTDIETALSFNTPHLSLYNLTLEPNTYFANFPP----KLPNEEVIDAMFDQNVDL 238

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            S  G   YEIS ++    E  HNLNYWR+GDYIGIG GAH ++   +       E+HPE
Sbjct: 239 LSKAGYRRYEISAYAKKDQECKHNLNYWRFGDYIGIGAGAHGKISYPNKITRQVRERHPE 298

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECER 360
           ++++++   G+A++E   + ++    EF++  LRL +G+    +    G  L    +   
Sbjct: 299 TYMQLMESKGNALIESREIEAKDLPFEFMLNTLRLSDGVDTNTYSERTGLPLSTISKGLN 358

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              ++G ++    S+L+ T +G+  L+++
Sbjct: 359 EACKKGLLDE-NPSKLKATDQGLRYLNNL 386


>gi|261380182|ref|ZP_05984755.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
 gi|284797029|gb|EFC52376.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
          Length = 391

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 133/375 (35%), Positives = 207/375 (55%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I + LT++Q        R I +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQLELPNIWGRPIETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F          LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALESAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KPGMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLAAMQGNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
            + ++SE    EF+M  LRL +G+     +   G      +      +++G +E    + 
Sbjct: 314 HKTVASEDLPFEFMMNALRLTDGVPAAMLQERTGVPTAKIMAQIETARQKGLLE-SDPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T++G   L+ ++
Sbjct: 373 FRPTEQGRLFLNDLL 387


>gi|146278694|ref|YP_001168853.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556935|gb|ABP71548.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 385

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 188/380 (49%), Positives = 251/380 (66%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQSRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP+ +A IL+ +   W +++++E+T+EANP SVE   F+G+R AGVNRIS+
Sbjct: 65  FGGGTPSLMEPELVAAILETVRATWPLANDLEVTLEANPGSVEAGRFRGFRDAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q++  W  EL  AL
Sbjct: 125 GIQALNDADLRQLGRLHTVAEARAAFDVARTTFDRVSFDLIYARQDQSLADWRQELSEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLTIE GT F +  K G L  LP E ++ D+Y LTQ +  A GL AYEIS
Sbjct: 185 AMAADHLSMYQLTIEDGTAFGERFKRGKLRGLPEEELSADMYALTQDLCDAAGLPAYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G GPGAH RV + + R A    K P  WL+ V ++G+ 
Sbjct: 245 NHAQPGAESRHNLIYWRGGDYAGAGPGAHGRVSLATGRWATEAPKAPGGWLERVERDGNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            + +  L  +  A E+LMM LRLREG+  +    LAGR LD     +LQ  G IE    +
Sbjct: 305 ELPRVRLDRDDHALEYLMMALRLREGLDSERHAALAGRPLDERRVTDLQEMGMIE-TDGA 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T RG  +L+SVIA+LA
Sbjct: 364 RLRATTRGRMVLNSVIASLA 383


>gi|194289071|ref|YP_002004978.1| coproporphyrinogen iii oxidase [Cupriavidus taiwanensis LMG 19424]
 gi|193222906|emb|CAQ68911.1| Oxygen-independent coproporphyrinogen III
           oxidase(Coproporphyrinogenase)(Coprogen oxidase)
           [Cupriavidus taiwanensis LMG 19424]
          Length = 410

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 216/381 (56%), Gaps = 12/381 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           GS  L +YVH P+CV+KCPYCDFNSH       +++ ++ ++ +   +++    L   R 
Sbjct: 29  GSPPLSLYVHVPWCVRKCPYCDFNSHAAPGADNHEIPEDLYLDALRADLEQSLPLVWGRP 88

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  YR +G+
Sbjct: 89  VHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEANPGTFEAEKFASYRASGI 148

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+QS  ++ L+ LGR H  +EA  AI +A+  F  ++ DL+YALP QT+ + + +
Sbjct: 149 NRLSIGIQSFNDRHLQALGRIHGGTEARRAIDIAQASFDNINLDLMYALPGQTLQECQAD 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ AL Y   HLSLY LT+E  TLF K        LP ++ A ++ +  ++ T+A G   
Sbjct: 209 VETALGYGTTHLSLYHLTLEPNTLFAKFPP----ALPDDDTAYEMQDWIEARTAAAGYRH 264

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE S ++    E+ HNLNYWR+GDY+GIG GAH ++      +     KHP +++     
Sbjct: 265 YETSAYARPHREARHNLNYWRFGDYLGIGAGAHGKLSFPQRVLRQMRHKHPATYMAQAMA 324

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFI 368
            G+AV E   + +++   EF++  LRL +G+    ++   G  L    +     +++G +
Sbjct: 325 -GNAVQEARDVGADELPFEFMLNALRLTDGVPASSFQDYTGLPLHTISKQLAEAEKKGLL 383

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
           E    + +R T+ G   L+ +
Sbjct: 384 E-ADLTTIRPTELGRRFLNDL 403


>gi|149912894|ref|ZP_01901428.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
 gi|149813300|gb|EDM73126.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
          Length = 385

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 177/378 (46%), Positives = 245/378 (64%), Gaps = 4/378 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNS V R  + Q  +++++L E+     +   R ++S+F GG
Sbjct: 10  FGLYLHWPFCEAKCPYCDFNSQVSR-DIDQSRWLRAYLHEIDRYAGMLPGRVLNSVFLGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A IL+ + ++W  ++++E+T+EANP SVE   F+GY +AGV+R+S+G+Q
Sbjct: 69  GTPSLMDPDVVAAILERVRQSWPQANDLEVTLEANPGSVEARRFRGYAEAGVSRVSMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L ++ LR LGR H+ +EA  A  +AR  F R+SFDLIYA   QT+  W  EL  AL  A
Sbjct: 129 ALNDEDLRRLGRIHSLAEARQAHDIARKNFDRVSFDLIYARQDQTVEAWRAELGEALEMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE+GT F   +  G L  LP+E+ A D+Y  TQ I +  G+ AYE+SNH+
Sbjct: 189 VDHLSLYQLTIEQGTAFADRYARGGLKGLPAEDAAADMYEATQEICAGAGMDAYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GAES HNL YWRYGDY+GIGPGAH RV +   R A     +P+ WL  V         
Sbjct: 249 KPGAESRHNLIYWRYGDYVGIGPGAHGRVTLDGQRHATEAWSNPDRWLSAVDAGQSE-KS 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E +  + QA E+LMMGLR+REGI V  +E +AG  L  E    L+  G IE     R+ 
Sbjct: 308 CEAIDPKDQAAEYLMMGLRIREGIDVVRYEAMAGEALSEEKLIELRELGMIE-SNGQRVW 366

Query: 378 CTQRGMTMLDSVIANLAV 395
            T++G  +L++V+ +L V
Sbjct: 367 VTEQGRPVLNAVLRDLLV 384


>gi|73542165|ref|YP_296685.1| coproporphyrinogen III oxidase [Ralstonia eutropha JMP134]
 gi|72119578|gb|AAZ61841.1| coproporphyrinogen III oxidase, anaerobic [Ralstonia eutropha
           JMP134]
          Length = 413

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 134/382 (35%), Positives = 215/382 (56%), Gaps = 13/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           GS  L +YVH P+CV+KCPYCDFNSH        + + ++ ++ +   +++    L   R
Sbjct: 31  GSPPLSLYVHVPWCVRKCPYCDFNSHAVPGKDGSHDIPEDAYLDALRADLEQSLPLVWGR 90

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  YR +G
Sbjct: 91  PVHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEANPGTFEAERFASYRASG 150

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+S+G+QS  +  L+ LGR H   EA AAI +A+  F  ++ DL+YALP QT+ Q   
Sbjct: 151 VNRLSIGIQSFNDSHLQALGRIHGEREARAAIDIAQRSFDNVNLDLMYALPGQTLEQCRS 210

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ ALSY   HLSLY LT+E  TLF K        LP +++A ++ +L ++ T+  G  
Sbjct: 211 DLESALSYGTTHLSLYHLTLEPNTLFAKFPP----ALPDDDLAYEMQDLIEARTTEAGYR 266

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE S ++    E+ HNLNYWR+GDY+GIG GAH ++   +  +     KHP +++    
Sbjct: 267 HYETSAYARAHREARHNLNYWRFGDYLGIGAGAHGKLSFPNRILRQMRHKHPATYMAQAM 326

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGF 367
             G+AV E   + +++   EF++  LRL +G+    +  + G  L          +++G 
Sbjct: 327 A-GNAVQEAREVGADELPFEFMLNALRLTDGVPASSFHDMTGLPLHAISRQLAAAEKKGL 385

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           ++    + +R T+ G   L+ +
Sbjct: 386 LD-ADPTVIRPTELGRRFLNDL 406


>gi|254487813|ref|ZP_05101018.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. GAI101]
 gi|214044682|gb|EEB85320.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. GAI101]
          Length = 385

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 175/377 (46%), Positives = 250/377 (66%), Gaps = 4/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R  + Q+ +  ++L E++     T  R ++++FFGG
Sbjct: 10  FGLYIHWPFCEAKCPYCDFNSHVSR-TIDQQAWRDAYLLELERGAAETKGRVLNAVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P+ +A ++  I + W V++++EIT+EANP SVE   F+G+R AGVNR+S+G+Q
Sbjct: 69  GTPSLMDPEIVADVIAAIYRLWPVANDLEITLEANPGSVEAGRFKGFRDAGVNRVSMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  LR LGR HN +EA+AA  +AR+ F R+SFDLIY    QT+++W+ EL++ALS A
Sbjct: 129 ALNDTDLRKLGRIHNTTEALAAFDIARSTFDRVSFDLIYGRQNQTLSEWKTELKQALSLA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LP +++  D+Y  TQ I    G+ +YE+SNH+
Sbjct: 189 IDHISLYQLTIEQGTAFGDRYAVGKLRGLPDDDLGADMYAATQEICDQMGMPSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
              A+S HNL YWRYGDY+GIGPGAH R+  G  R A     +P+ WL      G     
Sbjct: 249 RDSAQSRHNLIYWRYGDYLGIGPGAHGRLTKGGDRFATECFSNPKRWLDAAVS-GSTEKP 307

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L+   QA EFLMMGLRL+EG+ +K +E LAG  L  +    +Q  G I  +   RL 
Sbjct: 308 REQLAKSDQASEFLMMGLRLKEGVDLKRYEALAGSPLSAKKIIRMQDIGMIS-ISGDRLT 366

Query: 378 CTQRGMTMLDSVIANLA 394
            T +G  +L++++  L 
Sbjct: 367 VTNQGFMVLNAILEELL 383


>gi|262273746|ref|ZP_06051559.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
 gi|262222161|gb|EEY73473.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
          Length = 384

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 144/384 (37%), Positives = 211/384 (54%), Gaps = 15/384 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSISSI 74
            L +YVH P+CV+KCPYCDFNSH  +  V + ++I + L +++           R +SSI
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHTLKGDVPERDYIDALLDDLRKDLNRFHGVSGRELSSI 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+ P+ IA +L GI      + ++EIT+EANP +VE + F  YRKAGVNRIS
Sbjct: 66  FIGGGTPSLVSPEEIARLLQGIEAQIPFADDIEITMEANPGTVEADKFVAYRKAGVNRIS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           +GVQS + Q L  LGR H A EAI A  LA        + DL++ LP QT+     +L++
Sbjct: 126 IGVQSFDNQKLARLGRIHGADEAIRAARLAHEADLNSFNLDLMHGLPDQTLEGALDDLRQ 185

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    HLS YQLTIE  T +Y         LP ++   D++    ++ +  G   YE 
Sbjct: 186 AIALNPPHLSWYQLTIEPNTQYYSKPP----TLPDDDDLWDIFEQGHALLTEAGYVQYET 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S +S  G +  HNLNYWR+GDY+GIG GAH +V +  + V  +++ KHP  +L       
Sbjct: 242 SGYSKPGFQCRHNLNYWRFGDYLGIGCGAHGKVTLEDNTVKRTVKVKHPRGYLDPDNA-- 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIER 370
             + E   + + +   EF M   RL E     D+    G +LD      R+   +G +  
Sbjct: 300 -YLSEIITVEASELPFEFFMNRFRLVEPCPKADYPARTGLSLDTVEAPLRHAIIEGLLTE 358

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            Q +  + T++G   L+ ++AN  
Sbjct: 359 TQ-THWQVTEKGRLFLNDLLANFI 381


>gi|148553493|ref|YP_001261075.1| coproporphyrinogen III oxidase [Sphingomonas wittichii RW1]
 gi|148498683|gb|ABQ66937.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingomonas wittichii RW1]
          Length = 397

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 175/395 (44%), Positives = 239/395 (60%), Gaps = 10/395 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+ +    + +    L +Y+HWPFCV KCPYCDFNSHV R  V Q+ +  + L ++    
Sbjct: 7   LATHPPAPSLEREGGLALYIHWPFCVSKCPYCDFNSHV-RESVDQQAWRDALLRDLAHEA 65

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R + SIFFGGGTPSL+ P  +A ++D   ++W  + ++EIT+EANPSSVE   F 
Sbjct: 66  AALPGRRLGSIFFGGGTPSLMPPATVAALIDAATRHWPAADDIEITLEANPSSVEAARFA 125

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              +AG+NR+SLG+Q+L++  L +LGR H  +E +AA+  A+  F R+SFDLIYA P QT
Sbjct: 126 DLARAGINRVSLGLQALDDAVLGWLGRAHGVTEGLAALDTAQTSFGRVSFDLIYARPGQT 185

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W  EL RALS+  +HLSLYQLTIE GT F      G+ V    +   +L+  T++ T
Sbjct: 186 PEAWAAELGRALSFGTEHLSLYQLTIEPGTQFATRVAKGEFVPLDPDAGAELFEQTRAAT 245

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +A GL AYEISNH+  GAES HNL YWRYG+Y GIGPGAH R        A    K PE+
Sbjct: 246 AAAGLPAYEISNHARPGAESRHNLTYWRYGNYAGIGPGAHGR----RDGRATVRRKKPEN 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECE 359
           WL  V  NGH +  ++ L SE +A E L+MGLRL EG+ +     ++G      +D    
Sbjct: 302 WLARVEANGHGIEREDDLPSEARAQEALLMGLRLAEGVDLARIAAMSGLPVGRLVDAIAI 361

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L RQG + R    RL  +  GM +LD+++A + 
Sbjct: 362 DRLARQGLLAR-DGDRLTVSDAGMLLLDAILAEIV 395


>gi|221640721|ref|YP_002526983.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides KD131]
 gi|221161502|gb|ACM02482.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides KD131]
          Length = 385

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 182/380 (47%), Positives = 244/380 (64%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVEV  F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRTTWPLANDLEVTLEANPGSVEVGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVARATFDRVSFDLIYARQDQPLDHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F +  K G L  LP E ++ D+Y LTQ +    GL AYE+S
Sbjct: 185 AMAADHLSMYQLTVEDGTAFGERFKRGKLRGLPEEELSADMYALTQHLCERAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    K P +WL+ V ++G+ 
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPKAPGAWLERVERDGNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L  E  A E+LMM LRLREG+       LAGR LD     +L+  G IE +   
Sbjct: 305 ESPRVRLDPEDHALEYLMMSLRLREGLDRARHAALAGRPLDERRVADLREMGMIE-IDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RICATTEGRMVLNSVITALA 383


>gi|113866971|ref|YP_725460.1| coproporphyrinogen III oxidase [Ralstonia eutropha H16]
 gi|113525747|emb|CAJ92092.1| Coproporphyrinogen III oxidase, Fe-S oxidoreductase [Ralstonia
           eutropha H16]
          Length = 410

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 215/381 (56%), Gaps = 12/381 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           GS  L +YVH P+CV+KCPYCDFNSH       +++ ++ ++ +   +++    L   R 
Sbjct: 29  GSPPLSLYVHIPWCVRKCPYCDFNSHAAPGADNHEIPEDIYLDALRADLEQSLPLVWGRP 88

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+    +  +L  I     + ++ EIT+EA P + E + F  YR +G+
Sbjct: 89  VHTVFIGGGTPSLLSAAGMDRLLSDIRALLPLDADAEITMEAKPGTFEADKFASYRASGI 148

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+QS  ++ L+ LGR H  +EA  AI +A+  F  ++ DL+YALP QT+ +   +
Sbjct: 149 NRLSIGIQSFNDRHLQALGRIHGGAEARKAIDIAQASFDNINLDLMYALPGQTLDECRQD 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ ALSY   HLSLY LT+E  TLF K        LP ++ A ++ +  ++ T+  G   
Sbjct: 209 VEAALSYGTTHLSLYHLTLEPNTLFAKFPP----ALPDDDSAYEMQDWIEARTAQAGYRH 264

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE S ++    E+ HNLNYWR+GDY+GIG GAH ++      +     KHP ++++    
Sbjct: 265 YETSAYAKPHREARHNLNYWRFGDYLGIGAGAHGKLSFPHRILRQMRHKHPATYMERALA 324

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFI 368
            G+AV E   + +++   EF++  LRL +G+    +    G  L    +     +++G +
Sbjct: 325 -GNAVQEARDVGADELPFEFMLNALRLTDGVPASSFHDYTGLPLHTISKQLAEAEKKGLL 383

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
           E    + +R T+ G   L+ +
Sbjct: 384 E-ADLTTIRATELGRRFLNDL 403


>gi|291612876|ref|YP_003523033.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
 gi|291582988|gb|ADE10646.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
          Length = 399

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 220/385 (57%), Gaps = 8/385 (2%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
              +  Q    L +Y+H P+CV+KCPYCDFNSH  R  + ++ ++ + + +++    L  
Sbjct: 13  AQAVNFQALPPLSLYIHIPWCVRKCPYCDFNSHAARGAIPEKQYVAALVRDLEMALPLIW 72

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R + ++FFGGGTPSL+  + +A IL  +     +  N EIT+EANP +VE + F  +R+
Sbjct: 73  GRKVYTVFFGGGTPSLLSGEVLAEILRQVRMLLPLDINAEITLEANPGTVEADKFARFRE 132

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AGVNR+SLG+QS  +  L+ LGR H+++EA +AI +A+  F  ++ DL+YALP+QT+ + 
Sbjct: 133 AGVNRLSLGIQSFNDTHLQALGRIHSSAEARSAIGIAQQHFDNINLDLMYALPQQTLEEA 192

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             ++Q AL Y   HLS Y LT+E  TLF          LP ++ + D+    +++ + HG
Sbjct: 193 LQDVQTALQYRPQHLSCYHLTLEPNTLFAHQPP----PLPDDDASSDMQLAIEALLATHG 248

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE S  +  G  S HNLNYW++GDY+GIG GAHS++      +  +  K P+++++ 
Sbjct: 249 YQHYETSAFAQPGRRSRHNLNYWQFGDYLGIGAGAHSKLSFHDKVLRQARYKQPQAYMEA 308

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQ 365
           V + G  V ++  ++  + A EF+M  LRL EG     ++      L          +++
Sbjct: 309 VAR-GEPVQDEHEVAHAELAFEFMMNALRLNEGFDSTLFQERTSLPLLSIRRELDAAEKR 367

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVI 390
           G + +    ++  T+ G   L+ ++
Sbjct: 368 GLLFQ-DHKKIAPTEAGRRFLNDLL 391


>gi|288956858|ref|YP_003447199.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
 gi|288909166|dbj|BAI70655.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
          Length = 394

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 193/390 (49%), Positives = 255/390 (65%), Gaps = 6/390 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           ++ GQ      VYVHWPFC  KCPYCDFNSHV R +V  + +    L E+     LT  R
Sbjct: 7   SVPGQDGPGFAVYVHWPFCKSKCPYCDFNSHV-RERVDHDRWRAGLLRELDHYADLTAGR 65

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +++SIFFGGGTPSL+EP  +  I+D +A+ W V+  +E+T+EANP+SVE + F+ +R AG
Sbjct: 66  TVTSIFFGGGTPSLMEPATVGAIIDRVAQRWPVAERLEVTLEANPTSVEADKFRAFRGAG 125

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+SLG+Q+L++ SL+FLGR H+A+EA  AI LA  IF R SFDLIYA P QT+  W+ 
Sbjct: 126 INRVSLGIQALDDTSLKFLGRQHSAAEATGAITLAARIFDRFSFDLIYARPGQTVAAWQA 185

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL RAL +AV HLS+YQLTIE+GT F+ +H  GDLVLP E++A DLY  TQS  +A GL 
Sbjct: 186 ELARALDHAVGHLSVYQLTIEEGTAFHPLHARGDLVLPDEDLAGDLYEATQSQLAAAGLP 245

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           AYEISNH+ LG ES HNL YWRYGDY+GIGPGAH R+ +   + A    + PE WL+ V 
Sbjct: 246 AYEISNHARLGEESRHNLTYWRYGDYVGIGPGAHGRLTLDGEKFATRAHRAPEIWLERVE 305

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQ 365
           ++GHA    + +  + +  E LMMGLRL EG+ +       GR L    D      L   
Sbjct: 306 RDGHAAAPPDPIDRDARGTELLMMGLRLTEGVRLSRLVEETGRTLDEFVDPAALSRLIDG 365

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           GF+ R    RL  T  G+  L++V+  +  
Sbjct: 366 GFLSR-DAKRLVATSEGLQRLNAVLGAILA 394


>gi|325127827|gb|EGC50735.1| hypothetical protein NMXN1568_1476 [Neisseria meningitidis N1568]
 gi|325131882|gb|EGC54582.1| hypothetical protein NMBM6190_1409 [Neisseria meningitidis M6190]
 gi|325137932|gb|EGC60507.1| hypothetical protein NMBES14902_1559 [Neisseria meningitidis
           ES14902]
 gi|325139886|gb|EGC62417.1| hypothetical protein NMBCU385_1468 [Neisseria meningitidis CU385]
 gi|325197885|gb|ADY93341.1| hypothetical protein NMBG2136_0612 [Neisseria meningitidis G2136]
 gi|325200649|gb|ADY96104.1| hypothetical protein NMBH4476_1524 [Neisseria meningitidis H44/76]
          Length = 399

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEG 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQSQPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|229512517|ref|ZP_04401988.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae TMA 21]
 gi|229350410|gb|EEO15359.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae TMA 21]
          Length = 391

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+      ++EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIVFKPDIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|241758876|ref|ZP_04756989.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
 gi|241321084|gb|EER57297.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
          Length = 391

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 208/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++          L +Y+H P+C+KKCPYCDFNSH  +  + +E +I + LT++Q     
Sbjct: 5   AFQRPGQLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAKSIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++  V H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALNDVQTAIATGVSHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGELEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKANMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRSRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
             ++ N H  VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 AAMQSNPHEAVERKTVAAEDLPFEFMMNALRLTDGVPASTLQERTGVPTAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +    T++G   L+ ++
Sbjct: 362 QKGLLE-SDPTVFCPTEQGRLFLNDLL 387


>gi|325133820|gb|EGC56476.1| hypothetical protein NMBM13399_1544 [Neisseria meningitidis M13399]
          Length = 399

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEG 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQSQPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|218767786|ref|YP_002342298.1| coproporphyrinogen III oxidase [Neisseria meningitidis Z2491]
 gi|121051794|emb|CAM08100.1| putative porphyrin oxidoreductase [Neisseria meningitidis Z2491]
          Length = 399

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPTAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|325129805|gb|EGC52613.1| hypothetical protein NMBOX9930304_1399 [Neisseria meningitidis
           OX99.30304]
 gi|325202539|gb|ADY97993.1| hypothetical protein NMBM01240149_1428 [Neisseria meningitidis
           M01-240149]
 gi|325207711|gb|ADZ03163.1| hypothetical protein NMBNZ0533_0711 [Neisseria meningitidis
           NZ-05/33]
          Length = 399

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|15676563|ref|NP_273707.1| coproporphyrinogen III oxidase [Neisseria meningitidis MC58]
 gi|7225891|gb|AAF41083.1| oxygen-independent coprophorphyrinogen III oxidase family protein
           [Neisseria meningitidis MC58]
 gi|316983631|gb|EFV62612.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Neisseria meningitidis H44/76]
          Length = 391

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQSQPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPAVFRPTEKGRLFLNDLL 387


>gi|260441106|ref|ZP_05794922.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|291044438|ref|ZP_06570147.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|291011332|gb|EFE03328.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
          Length = 391

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|91787237|ref|YP_548189.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas sp. JS666]
 gi|91696462|gb|ABE43291.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas sp. JS666]
          Length = 394

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 220/380 (57%), Gaps = 8/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+C+KKCPYCDFNSH    ++ ++ ++ + + +++    L   R++ SIF G
Sbjct: 20  PLSLYVHLPWCLKKCPYCDFNSHEVSGEMPEQRYLDALIADLEAALPLVWGRTVHSIFIG 79

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I  +L  I     + ++ EIT+EANP + E + F+ +R AGV R+S+GV
Sbjct: 80  GGTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFKAFRSAGVTRLSVGV 139

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ L+ LGR H+ ++AIAA+  A   F   + D++YALP QT+     ++++AL+ 
Sbjct: 140 QSFDDRHLKALGRVHDRAQAIAAVEEAAQAFDTFNLDIMYALPGQTLDNLAQDMRQALAL 199

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S+Y LTIE  T F K        +P E++A  + +    +T   GL  YE+S ++
Sbjct: 200 QPPHISIYHLTIEPNTYFAKFPP----AIPEEDMAYAMLDKITEMTEGAGLQRYEVSAYA 255

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNLNYW++GDY+GIG GAH ++      V     + P+ +++     G AV +
Sbjct: 256 RAGHQCFHNLNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRYRDPKLYMEKALA-GDAVTQ 314

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
           +  +S  +   EF++  LRLREG  ++D+    G  L    +     +R+G +ER  F R
Sbjct: 315 ETEVSRTELPFEFMLNALRLREGFKLQDFCDKTGLPLTAIQQGLEEGERKGLLER-DFVR 373

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           ++ T+RG   L+ + +    
Sbjct: 374 VKPTERGFDFLNDLQSLFLA 393


>gi|319638392|ref|ZP_07993154.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
 gi|317400141|gb|EFV80800.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
          Length = 391

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 130/375 (34%), Positives = 206/375 (54%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +E +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHTPWCIKKCPYCDFNSHSLKNGLPEEAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFEKVNIDLMYALPNQTVQTALNDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E  T F          LP +  A+D+ +       + G   YE S  +
Sbjct: 197 GVSHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALESAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L  ++ N H  VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLAAMQSNPHEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSR 375
           ++ +++E    EF+M  LRL +G+     +   G             +++G +E    + 
Sbjct: 314 RKTVAAEDLPFEFMMNVLRLTDGVPAATLQERTGVPTAKIMTQIETARQKGLLE-SDPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T++G   L+ ++
Sbjct: 373 FRPTEQGRLFLNDLL 387


>gi|224824835|ref|ZP_03697942.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
 gi|224603328|gb|EEG09504.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
          Length = 396

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 213/380 (56%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CV+KCPYCDFNSH  +    ++ ++ + L +++        R + +IF G
Sbjct: 19  PLSLYIHFPWCVRKCPYCDFNSHEVKNGFDEDAYVAALLADLESALPAVWGRPVHTIFMG 78

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L GI     +  + EIT+EANP + E + F+G+R+AG+NR+S+G+
Sbjct: 79  GGTPSLFSARAMDTLLAGIRARVRLYPDAEITMEANPGTFESDKFKGFREAGINRLSIGI 138

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +   L+ LGR H+  +A  A+ +A   F  ++ DL+YALP QT+ Q   ++  ALS+
Sbjct: 139 QSFDPAHLKALGRIHHGDDARRAVDIALTHFDNVNLDLMYALPGQTLEQALTDMGTALSF 198

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LTIE  TLF +        LP + ++ D+    ++  +  G   YE S  +
Sbjct: 199 GVTHVSAYHLTIEPNTLFAR---YLPPKLPDDELSADMQEALEARLTEAGFGHYETSAFA 255

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNLNYW++GDY+GIG GAH+++      V     K P ++LK V + G     
Sbjct: 256 RPGRECRHNLNYWQFGDYLGIGAGAHAKISAHDGIVREMRYKQPAAYLKAVAE-GRPTQS 314

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
           +E ++   +  EF+M  LRL +G  ++ +    G  L    +R L   + QG IER   +
Sbjct: 315 RERIARADRPFEFMMNLLRLTDGFELRLFAERTGLPL-THIQRELAEAEAQGLIER-DLT 372

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L+ T +G   L+ ++    
Sbjct: 373 TLKPTLKGQRFLNDLLTLFL 392


>gi|70733131|ref|YP_262904.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf-5]
 gi|68347430|gb|AAY95036.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 400

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 136/382 (35%), Positives = 214/382 (56%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++         R +SSIFFG
Sbjct: 27  PLALYIHIPWCVRKCPYCDFNSHAASPTLPEEEYVDALLADLDQDLHAVHGRELSSIFFG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   Q +  +L G+ +    + ++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 87  GGTPSLFSAQALGRLLKGVEQRIRFAPDIEITLEANPGTFEQEKFTAYRALGINRLSIGI 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +EQ L+ LGR HN  EAI A  +AR   F   + DL++ LP Q++     +L++A++
Sbjct: 147 QSFQEQKLKALGRIHNGDEAIRAAGMARQAGFDNFNLDLMHGLPDQSLDDALGDLRQAIA 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+        VLP ++   D+    Q++ + HG   YE+S +
Sbjct: 207 MKPTHLSWYQLTLEPNTVFWNQPP----VLPEDDTLWDIQEAGQALLAEHGYAQYEVSAY 262

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L   ++     
Sbjct: 263 AQPGRAARHNLNYWSFGDFIGIGAGAHGKLSHPDGRILRTWKTRLPKDYLNPAKQFK--- 319

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             ++ L +E+   EFLM  LRL +G+    +    G +L    E  R  ++ G + +V+ 
Sbjct: 320 AGEKALGNEELPFEFLMNALRLTDGVDAALFAQRTGLDLVSLAEGRRQAEQSGLL-QVEP 378

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           SRL  T RG   L+ ++    +
Sbjct: 379 SRLAATARGQLFLNDLLQYFLI 400


>gi|319410037|emb|CBY90371.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria meningitidis WUE 2594]
          Length = 391

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPTAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPAVFRPTEKGRLFLNDLL 387


>gi|254804543|ref|YP_003082764.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha14]
 gi|254668085|emb|CBA04593.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha14]
 gi|254670338|emb|CBA05750.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha153]
 gi|308388850|gb|ADO31170.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha710]
          Length = 391

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPAVFRPTEKGRLFLNDLL 387


>gi|121634461|ref|YP_974706.1| coproporphyrinogen III oxidase [Neisseria meningitidis FAM18]
 gi|120866167|emb|CAM09907.1| putative porphyrin oxidoreductase [Neisseria meningitidis FAM18]
 gi|325135743|gb|EGC58355.1| hypothetical protein NMBM0579_1451 [Neisseria meningitidis M0579]
          Length = 399

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS     L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNNDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEG 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQSQPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|255066001|ref|ZP_05317856.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria sicca ATCC 29256]
 gi|255049912|gb|EET45376.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria sicca ATCC 29256]
          Length = 391

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/375 (33%), Positives = 203/375 (54%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F  M       L  +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHMPPK---GLLQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++    A VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSAAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ +++E    EF+M  LRL +G+     +   G      +      +++G +     + 
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLA-TDPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T+RG   L+ ++
Sbjct: 373 FRPTERGRLFLNDLL 387


>gi|159046000|ref|YP_001534794.1| coproporphyrinogen III oxidase [Dinoroseobacter shibae DFL 12]
 gi|157913760|gb|ABV95193.1| oxygen-independent coproporphyrinogen III oxidase [Dinoroseobacter
           shibae DFL 12]
          Length = 387

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 178/385 (46%), Positives = 244/385 (63%), Gaps = 3/385 (0%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M        G+Y+HWPFC  KCPYCDFNSHV R +V Q  +  +FL+E+      T  R 
Sbjct: 1   MEDWQHGGFGLYLHWPFCAAKCPYCDFNSHV-RARVDQAAWENAFLSEIGRAGIETEGRR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPSL+EP  +A I+D I + W  S+++EIT+EANP+SVE   F+ YR AGV
Sbjct: 60  LDTVFFGGGTPSLMEPDLVASIIDRIRRTWPTSNSLEITLEANPTSVEAGRFRAYRDAGV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+G+Q+L +  L+ LGR H+  EA +A  +A+  F R+SFDLIYA   QT+  W  E
Sbjct: 120 NRVSMGIQALNDADLKALGRLHSVKEAQSAFEVAQAHFERVSFDLIYARQGQTLEAWIAE 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLH 249
           L+ ALS A+DHLSLYQLT+E GT F      G L  LP  ++  D++  TQ + S  G+ 
Sbjct: 180 LRAALSMAIDHLSLYQLTVEPGTAFGDRAARGMLRGLPDGDLGADMFEATQDLCSDAGMP 239

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           AYE+SNH+  G ES HNL YWRYGDY+GIGPGAH R+ +   + A S   HPE+WL  V+
Sbjct: 240 AYEVSNHAAEGCESRHNLIYWRYGDYVGIGPGAHGRLTLSGQKWATSTPLHPEAWLAQVQ 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
            +GH    ++ L+  + ++E L+MGLRL EG+S+     +AG  L       LQ    I 
Sbjct: 300 DSGHGETPRQLLTPNEISEELLLMGLRLSEGVSLNRITAIAGAPLPERKLSELQEAQLI- 358

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           RV   RLR T +G  +L++++  L 
Sbjct: 359 RVDGDRLRTTLQGRMVLNAILRELL 383


>gi|325143947|gb|EGC66257.1| hypothetical protein NMBM01240013_1555 [Neisseria meningitidis
           M01-240013]
 gi|325206490|gb|ADZ01943.1| hypothetical protein NMBM04240196_1502 [Neisseria meningitidis
           M04-240196]
          Length = 399

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + ++FFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETVFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKINIDLMYALPNQTVR 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +   S    
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHSALEN 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 GGFIHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|59800687|ref|YP_207399.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA 1090]
 gi|293399618|ref|ZP_06643771.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
 gi|59717582|gb|AAW88987.1| putative porphyrin oxidoreductase [Neisseria gonorrhoeae FA 1090]
 gi|291610187|gb|EFF39309.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
          Length = 391

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQSQPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|330815845|ref|YP_004359550.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia gladioli BSR3]
 gi|327368238|gb|AEA59594.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia gladioli BSR3]
          Length = 409

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 133/381 (34%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +E ++ +   +++        R + +IF 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPEEAYLDALRADLEQALPFVWGRQVHTIFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A + F   + DL++ALPKQT+ Q + +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAASTFDNFNLDLMFALPKQTLAQCQADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K        +P ++ + D+    Q  T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIQERTAQAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 ARPNRQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATYMEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  L          +R+G I R  + 
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLAEGFPVASYAERTGLPLSTIEPALAEAERRGLIAR-DYE 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  T  G   L+  +  L +
Sbjct: 382 RIAPTPLGQRFLND-LQELFL 401


>gi|293605629|ref|ZP_06688009.1| coproporphyrinogen III oxidase [Achromobacter piechaudii ATCC
           43553]
 gi|292816009|gb|EFF75110.1| coproporphyrinogen III oxidase [Achromobacter piechaudii ATCC
           43553]
          Length = 406

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/375 (33%), Positives = 216/375 (57%), Gaps = 7/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +  ++ +  ++++        R + S+F G
Sbjct: 31  PLSIYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRSDLEQALPSIWGRQVVSVFIG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     +  + EIT+EANP + E + F+ Y  +GV R SLG+
Sbjct: 91  GGTPSLLSSAGLDELLAMLRACLNLWPDAEITMEANPGTAEASRFRDYAASGVTRFSLGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR H+A++A AAI +A++   R++ D+++ALP QT+     +L++A+S+
Sbjct: 151 QSFDDAQLKKLGRIHDAAQARAAIDMAQHAVSRVNLDMMFALPGQTLEACVADLRQAISF 210

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K        LP ++ +  + +  ++  +A GL  YE+S ++
Sbjct: 211 GTEHLSLYHLTMEPNTVFAKFPP---AELPDDDTSAAMQDAVEAELAAAGLSRYEVSAYA 267

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAVV 316
             GA   HNLNYW +GDY+GIGPGAH ++      V  +  + P+SW++  + ++G  + 
Sbjct: 268 RAGARCRHNLNYWEFGDYLGIGPGAHGKLSFHDRIVREARLRSPDSWMQAAMARDGSHLA 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
           E   +  ++   EF++  LRL++G+    +    G +L           ++G ++    +
Sbjct: 328 ESRQVGPDELPFEFMLNALRLKDGVPATAFNERTGLSLAAIAHQLEAASKRGLLD-ADPT 386

Query: 375 RLRCTQRGMTMLDSV 389
           RL+ T  G   L+ +
Sbjct: 387 RLKATPLGWRFLNDL 401


>gi|258625603|ref|ZP_05720485.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM603]
 gi|258582105|gb|EEW06972.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM603]
          Length = 394

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHKKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +++          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|262403919|ref|ZP_06080476.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC586]
 gi|262349881|gb|EEY99017.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC586]
          Length = 391

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 210/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKDDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +++          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|258620718|ref|ZP_05715753.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM573]
 gi|258586916|gb|EEW11630.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           mimicus VM573]
          Length = 394

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLTSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHKKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +++          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|240080124|ref|ZP_04724667.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268596276|ref|ZP_06130443.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268550064|gb|EEZ45083.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
          Length = 391

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQSQPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|194097947|ref|YP_002000993.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
 gi|239998420|ref|ZP_04718344.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|240015984|ref|ZP_04722524.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA6140]
 gi|268594282|ref|ZP_06128449.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|193933237|gb|ACF29061.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
 gi|268547671|gb|EEZ43089.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|317163706|gb|ADV07247.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 391

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQSQPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|229530297|ref|ZP_04419685.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae 12129(1)]
 gi|229332070|gb|EEN97558.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae 12129(1)]
 gi|327483309|gb|AEA77716.1| Radical SAM family enzyme, oxygen-independent [Vibrio cholerae
           LMA3894-4]
          Length = 391

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIVFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|240112338|ref|ZP_04726828.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|240117362|ref|ZP_04731424.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|240122917|ref|ZP_04735873.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
 gi|254493139|ref|ZP_05106310.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 1291]
 gi|268598397|ref|ZP_06132564.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|268603058|ref|ZP_06137225.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|268681537|ref|ZP_06148399.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
 gi|226512179|gb|EEH61524.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 1291]
 gi|268582528|gb|EEZ47204.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|268587189|gb|EEZ51865.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|268621821|gb|EEZ54221.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
          Length = 391

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            GL  YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGLIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQSQPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|77461548|ref|YP_351055.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf0-1]
 gi|77385551|gb|ABA77064.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 401

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 130/377 (34%), Positives = 216/377 (57%), Gaps = 12/377 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R +SSIFFGGGTP
Sbjct: 32  YIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDAMLADLDQDLHAVYGRELSSIFFGGGTP 91

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SL   + +  +L+G+ +    + ++EIT+EANP + E   F  YRK G+NR+S+G+QS +
Sbjct: 92  SLFSAEALGRLLEGVKQRIPFADDIEITLEANPGTFEQEKFVAYRKLGINRLSIGIQSFQ 151

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A+     
Sbjct: 152 QEKLKALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLDDALSDLRQAIELKPT 211

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S YQLT+E  T+F+        VLP ++   D+    Q++ + HG   YE+S ++  G
Sbjct: 212 HISWYQLTLEPNTVFWNQPP----VLPEDDTLWDIQEAGQALLAEHGYAQYEVSAYAQPG 267

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKE 319
             + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +        ++
Sbjct: 268 RPARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYLNPAKSFQ---AGEK 324

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQFSRLR 377
            L++++   EFLM  LRL  G+  + +    G +LD   E  R  ++ G + +V+ SRL 
Sbjct: 325 ALTNDEMPFEFLMNALRLTAGVESRLYPERTGLSLDTLAEGRREAEQSGLL-QVEPSRLA 383

Query: 378 CTQRGMTMLDSVIANLA 394
            T+RG   L+ ++    
Sbjct: 384 TTERGQLFLNDLLQQFL 400


>gi|34496382|ref|NP_900597.1| coproporphyrinogen III oxidase [Chromobacterium violaceum ATCC
           12472]
 gi|34102235|gb|AAQ58601.1| probable porphyrin oxidoreductase [Chromobacterium violaceum ATCC
           12472]
          Length = 396

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 137/379 (36%), Positives = 209/379 (55%), Gaps = 7/379 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH+P+C++KCPYCDFNSH  +    +  ++ + L ++++       R ++SIF G
Sbjct: 18  PLALYVHFPWCIRKCPYCDFNSHEPKNGFDEMAYVDALLRDLEYSLPEVWGRPLTSIFMG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ +  +L G+     +  + EIT+EANP + E+  F+GYR+AG+NR+S+G+
Sbjct: 78  GGTPSLFSPQAMDALLAGVRARMKLHPDAEITMEANPGTFEIERFRGYREAGINRLSIGI 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   + L+ LGR H+  EA  A+ +A   F  ++ DL+YALP QT+ +   +L  ALSY
Sbjct: 138 QSFNPKHLKALGRIHDGDEAKRAVEIALTHFDNVNLDLMYALPGQTLDEALSDLNTALSY 197

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + HLS Y LTIE  TLF          LP + V+ D+    +S   A G   YE S  +
Sbjct: 198 GITHLSAYHLTIEPNTLFAAQ---TPQNLPDDEVSADMQEAIESCLEAAGFDHYETSAFA 254

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HNLNYW++GDY+GIG GAH ++   +  V     K P ++LK V   G  +  
Sbjct: 255 KPGRHSRHNLNYWQFGDYVGIGAGAHGKISSHAGIVRQMRHKQPAAYLKAVAA-GAPLQS 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSR 375
            + ++      EF+M  LRL  G   + ++   G  L +   +    Q QG ++    + 
Sbjct: 314 SQKVARADLPFEFMMNLLRLTSGFESRLFQERTGLPLALIRRQLDAAQAQGLLD-TDGAI 372

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T +G   L+ ++    
Sbjct: 373 LRPTLKGQRFLNDLLTLFL 391


>gi|309378944|emb|CBX22397.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 391

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + ++FFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETVFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEN 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPAMQCCHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQSQPSVAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTKQGRLFLNDLL 387


>gi|240127626|ref|ZP_04740287.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268686006|ref|ZP_06152868.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626290|gb|EEZ58690.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP +VE+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTVEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQNRPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|254226316|ref|ZP_04919907.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V51]
 gi|125621178|gb|EAZ49521.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V51]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAECIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWAISEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|163856586|ref|YP_001630884.1| coproporphyrinogen III oxidase [Bordetella petrii DSM 12804]
 gi|163260314|emb|CAP42616.1| putative porphyrin oxidoreductase [Bordetella petrii]
          Length = 405

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 132/376 (35%), Positives = 219/376 (58%), Gaps = 10/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +   +++        R + S+F G
Sbjct: 31  PLSVYVHVPWCVRKCPYCDFNSHAAPAELPERAYLDALRADLEQALPSVWGRQVVSVFLG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     V  + EIT+EANP + E   F+ Y  +GVNR+SLG+
Sbjct: 91  GGTPSLLSAAGLDELLAMLRACLNVLPDAEITMEANPGTAEAGRFRDYAASGVNRLSLGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR H+AS+A AAI +A+    R++ DL++ALP Q MT    ++++ALS+
Sbjct: 151 QSFDDAQLKKLGRIHDASQARAAIEMAQRAVDRVNLDLMFALPGQDMTACLDDVRQALSF 210

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K        LP ++ +  + +  ++   A GL  YE+S ++
Sbjct: 211 GTEHLSLYHLTLEPNTVFAKYPP----ELPDDDASAAMQDAVEAALQAAGLLRYEVSAYA 266

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVV 316
             GA   HNLNYW +GDY+G+GPGAH ++      V  +  ++P+SW+   + ++G  + 
Sbjct: 267 RPGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIVREARLRNPDSWMAAAIARDGSHIA 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           E   +  ++   EF++  LRL++G++   ++   G +L     + LQ   ++G ++    
Sbjct: 327 EARTVGPDELPFEFMLNALRLKDGVAASSFQERTGLSL-AAIAQPLQAATKRGLLDP-DP 384

Query: 374 SRLRCTQRGMTMLDSV 389
           +RLR T  G   L+ +
Sbjct: 385 TRLRATPLGWRFLNDL 400


>gi|161869602|ref|YP_001598769.1| coproporphyrinogen III oxidase [Neisseria meningitidis 053442]
 gi|161595155|gb|ABX72815.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis 053442]
          Length = 399

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKINIDLMYALPNQTVR 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|294671109|ref|ZP_06735964.1| hypothetical protein NEIELOOT_02817 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307217|gb|EFE48460.1| hypothetical protein NEIELOOT_02817 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/375 (33%), Positives = 203/375 (54%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALNDVQTAITT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F          LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSVAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ +++E    EF+M  LRL +G+     +   G      +      +++G +E    + 
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGIPAAKIMAQIETARQKGLLE-TNPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T++G   L+ ++
Sbjct: 373 FRPTEQGRLFLNDLL 387


>gi|121728584|ref|ZP_01681605.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V52]
 gi|153819142|ref|ZP_01971809.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae NCTC 8457]
 gi|227080665|ref|YP_002809216.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae M66-2]
 gi|229507093|ref|ZP_04396599.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae BX 330286]
 gi|298501014|ref|ZP_07010815.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
 gi|121629140|gb|EAX61583.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae V52]
 gi|126510287|gb|EAZ72881.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae NCTC 8457]
 gi|227008553|gb|ACP04765.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae M66-2]
 gi|229355838|gb|EEO20758.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae BX 330286]
 gi|297540262|gb|EFH76322.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAKLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|229593141|ref|YP_002875260.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25]
 gi|229365007|emb|CAY53156.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 379

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 137/381 (35%), Positives = 212/381 (55%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++         R +SSIFFG
Sbjct: 6   PLALYIHIPWCVRKCPYCDFNSHTASKVLPEEEYVDALLADLDQDLHAVYGRELSSIFFG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+      +S++EIT+EANP + E   F  YRK G+NR+S+G+
Sbjct: 66  GGTPSLFSAAALGRLLKGVEARIPFASDIEITLEANPGTFEQEKFVAYRKLGINRLSIGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++Q L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A++
Sbjct: 126 QSFQQQKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLEDALSDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP ++   D+    Q++ + HG   YE+S +
Sbjct: 186 LKPTHLSWYQLTLEPNTVFWNQPP----ALPEDDTLWDIQEAGQALLAEHGYAQYEVSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +      
Sbjct: 242 AQPGRPARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRAPKDYLNPAKSFQAGA 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
            E   L++E+   EFLM  LRL EG+  K +    G  L    E  R  ++ G + +V+ 
Sbjct: 302 KE---LTNEELPFEFLMNALRLTEGVEAKLYAERTGLALSSLDEGRREAEQSGLM-QVEP 357

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           SRL  T RG   L+ ++    
Sbjct: 358 SRLAATDRGQLFLNDLLQKFL 378


>gi|298368352|ref|ZP_06979670.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282355|gb|EFI23842.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/375 (33%), Positives = 203/375 (54%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDGMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F          LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPK---CLPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ +++E    EF+M  LRL +G+     +   G      +      +++G + +   + 
Sbjct: 314 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLL-KTNPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T+RG   L+ ++
Sbjct: 373 FRPTERGRLFLNDLL 387


>gi|261392962|emb|CAX50547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria meningitidis 8013]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQSQPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGIPAAQIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T+RG   L+ ++
Sbjct: 362 QKGLLE-TDPAVFRPTERGRLFLNDLL 387


>gi|240013545|ref|ZP_04720458.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI18]
 gi|240115078|ref|ZP_04729140.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|240120617|ref|ZP_04733579.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID24-1]
 gi|240125171|ref|ZP_04738057.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
 gi|268600752|ref|ZP_06134919.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|268683766|ref|ZP_06150628.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
 gi|268584883|gb|EEZ49559.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|268624050|gb|EEZ56450.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
          Length = 391

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+Y+LP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYSLPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATDATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGTLEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G             +
Sbjct: 302 ALMQNRPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMVQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEKGRLFLNDLL 387


>gi|254461596|ref|ZP_05075012.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacterales bacterium HTCC2083]
 gi|206678185|gb|EDZ42672.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 384

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 174/380 (45%), Positives = 241/380 (63%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV R ++ +  ++ ++L E+         R ++++F
Sbjct: 7   NGGFGIYVHWPFCEAKCPYCDFNSHVSR-EIDEARWLNAYLCELDRAAVELSGRVVNAVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I++ I K+W V ++ EIT+EANP SVE   F+GY   GV RIS+
Sbjct: 66  FGGGTPSLMHPDTVAAIIERIRKHWPVPNDPEITLEANPGSVEAGRFRGYADGGVTRISM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L ++ L+ LGR H   EA  A ++AR+ F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 126 GVQALNDRDLKRLGRIHTVDEAKKAFNIARSTFERVSFDLIYARQDQTLENWKKELNEAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A+DHLSLYQLTIEKGT F   ++ G L  LP E++A D+Y+ T  +    GL  YE+S
Sbjct: 186 CLAIDHLSLYQLTIEKGTAFSARYEKGGLTGLPVEDLAADMYDATNELCERAGLFGYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  GAES HN+ YWRYGDY+GIGPGAH R+ V   + A    + P +WL+   + G  
Sbjct: 246 NYAKPGAESRHNMIYWRYGDYLGIGPGAHGRLTVDGTKYATEHFRMPSAWLEN-SERGKG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              ++ LS+  QA+E+L+MGLR+ EGI     E LAG  +D     +L     I +   +
Sbjct: 305 EKIRDGLSNTDQANEYLIMGLRITEGIDRARLENLAGVPVDQSSLDHLNDLNLITQ-DGA 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            LR T +G  +L+SVI  L 
Sbjct: 364 NLRTTPQGRLLLNSVIGELV 383


>gi|187929361|ref|YP_001899848.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12J]
 gi|309781784|ref|ZP_07676517.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
 gi|187726251|gb|ACD27416.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12J]
 gi|308919425|gb|EFP65089.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
          Length = 422

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/387 (36%), Positives = 220/387 (56%), Gaps = 13/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +E F+ +   +++    +   R + +
Sbjct: 38  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEQGIPEERFLAAVRQDLEAALPMVWGRHVHT 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 98  IFIGGGTPSLLSAQGLDRLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 158 SIGIQSFNDAYLQALGRIHSAAEARAAIDMARAHFDNINLDLMFALPGQTLAECEADVEA 217

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+  +H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 218 ALSFDTNHVSLYHLTLEPNTYFAKYPP----ALPDDDAAFAMQDWIHARLAAAGYEHYEV 273

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     KHP+++L+     G 
Sbjct: 274 SAYAKAGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVIREMRHKHPDTYLRQAETAGG 333

Query: 314 AVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
           A V  E+  + +     EF++  LRL +G  V  ++   G  L    ER L   +++G +
Sbjct: 334 AAVMQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLRS-IERQLDAAEQRGLL 392

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     +R T+ G   L+  +  L +
Sbjct: 393 TR-DHVAIRPTELGQRFLND-LQELFL 417


>gi|296315022|ref|ZP_06864963.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria polysaccharea ATCC 43768]
 gi|296838225|gb|EFH22163.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria polysaccharea ATCC 43768]
          Length = 391

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 207/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T+RG   L+ ++
Sbjct: 362 QKGLLE-TNPAVFRPTERGRLFLNDLL 387


>gi|326318284|ref|YP_004235956.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375120|gb|ADX47389.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 416

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/386 (35%), Positives = 217/386 (56%), Gaps = 12/386 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSI 71
               L +YVH P+C+KKCPYCDFNSH  R   G   ++ ++ + + +++    L   R++
Sbjct: 36  APPPLSLYVHLPWCLKKCPYCDFNSHEARGGAGALQEQRYLDALMADLEAALPLVWGRTV 95

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+F GGGTPSL  P+ I  ++ G+     + ++ EIT+EANP + E + F+ YR AGV 
Sbjct: 96  HSVFIGGGTPSLFSPEAIDRLISGVRARLRLEADAEITLEANPGTFEKDRFRAYRTAGVT 155

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S+GVQS +++ L+ LGR H+ ++A+AA+  A   F   + D++YALP Q++   E ++
Sbjct: 156 RLSVGVQSFDDRFLQALGRVHDRAQALAAVQEAAQAFDTFNLDIMYALPGQSLEDLEQDV 215

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             ALS    HLS+Y LTIE  T F K       V+P +++A  + +    +T   GL  Y
Sbjct: 216 ALALSLQPPHLSIYHLTIEPNTYFAKFPP----VVPEDDLAYAMLDRITEMTETAGLRRY 271

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EIS ++  G + +HN NYW++GDY+GIG GAH ++      V     + P+ +++     
Sbjct: 272 EISAYARPGHQCVHNTNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRFRDPQRYMEQALA- 330

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
           G+AV +   +       EF++  LRLREG +++D+    G  L           R+G I 
Sbjct: 331 GNAVAQDHEVRRADLPFEFMLNALRLREGFALQDFADRTGLPLSAIAGALDEAGRKGLIV 390

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
           R   +R+R T+RG   L   +  L +
Sbjct: 391 R-DAARVRPTERGFDFLSD-LQELFL 414


>gi|261364291|ref|ZP_05977174.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
 gi|288567538|gb|EFC89098.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
          Length = 391

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/375 (33%), Positives = 203/375 (54%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI+ A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLMRLGRVHNGKEALTAINTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIAT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F          LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPIEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ +++     EF+M  LRL +G+     +   G      +      +++G +E    + 
Sbjct: 314 RKTVAAADLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLE-TDPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
            R T+RG   L+ ++
Sbjct: 373 FRPTERGRLFLNDLL 387


>gi|262164092|ref|ZP_06031831.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
 gi|262027620|gb|EEY46286.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
          Length = 394

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G A+      ++EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGFAERIAFKPDIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHKKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +++          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEVIRPTLDWALNEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|58040027|ref|YP_191991.1| coproporphyrinogen III oxidase [Gluconobacter oxydans 621H]
 gi|58002441|gb|AAW61335.1| HemN [Gluconobacter oxydans 621H]
          Length = 392

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/391 (45%), Positives = 236/391 (60%), Gaps = 10/391 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--- 68
           T      L +Y+HWPFC+ KCPYCDFNSHV R  + Q+ F +    E+            
Sbjct: 3   TTSQPGPLSLYIHWPFCLAKCPYCDFNSHV-REVIPQQRFAEVLRRELAHDAARLTRDGV 61

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R + SIFFGGGTPSL+ P+ +A +++   + +    ++EIT+EANP+SVE   F  +R+
Sbjct: 62  KRPLRSIFFGGGTPSLMAPETVAALIEDAHRLFDAEDDLEITLEANPTSVEAGKFAAFRQ 121

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AGVNR+SLGVQSL + +LR LGR H+A++AI A+  AR +FPR+SFDLIYA P Q+   W
Sbjct: 122 AGVNRVSLGVQSLRDDALRKLGREHSATQAIRALETARTLFPRISFDLIYARPGQSDADW 181

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             EL  AL    DHLSLYQLTIE GT F  MH+ G+L LP E+ A  LY+LT  I + HG
Sbjct: 182 TDELTTALDLVADHLSLYQLTIEPGTKFEAMHRRGELTLPDEDTAARLYDLTGEIAARHG 241

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L  YE+SN++  GAES HNL YWRY DYIGIGPGAH R+ +     A    + PE W + 
Sbjct: 242 LLPYEVSNYARPGAESRHNLTYWRYADYIGIGPGAHGRLTLDGELYATRRHRAPEPWAER 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQ 363
           + K G    E+  LS E++  E L+MGLRL EGI    +    GR L    D        
Sbjct: 302 IEKTGSGSTEETLLSPEEKGREALLMGLRLSEGIDAARFAARTGRALMDCVDPALLEACI 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            + ++ER     LR T  G   L++++A L 
Sbjct: 362 EENYLER-DNGILRATGEGRLRLEAILARLV 391


>gi|15640482|ref|NP_230109.1| coproporphyrinogen III oxidase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|153823174|ref|ZP_01975841.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae B33]
 gi|229509071|ref|ZP_04398559.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae B33]
 gi|229519739|ref|ZP_04409182.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae RC9]
 gi|229606251|ref|YP_002876899.1| coproporphyrinogen III oxidase [Vibrio cholerae MJ-1236]
 gi|254850686|ref|ZP_05240036.1| coproporphyrinogen III oxidase [Vibrio cholerae MO10]
 gi|9654880|gb|AAF93628.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|126519300|gb|EAZ76523.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae B33]
 gi|229344428|gb|EEO09403.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae RC9]
 gi|229353996|gb|EEO18930.1| similar to coproporphyrinogen III oxidase oxygen-independent
           [Vibrio cholerae B33]
 gi|229368906|gb|ACQ59329.1| coproporphyrinogen III oxidase oxygen-independent-like radical SAM
           family enzyme [Vibrio cholerae MJ-1236]
 gi|254846391|gb|EET24805.1| coproporphyrinogen III oxidase [Vibrio cholerae MO10]
          Length = 391

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/389 (36%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
             SL +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPSLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|332559698|ref|ZP_08414020.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
 gi|332277410|gb|EGJ22725.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
          Length = 385

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 180/380 (47%), Positives = 242/380 (63%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVE   F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRTTWPLANDLEVTLEANPGSVEAGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVARATFDRVSFDLIYARQDQPLEHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F    K G L  LP E ++ D+Y LTQ +  A GL AYE+S
Sbjct: 185 TMAADHLSMYQLTVEDGTAFGDRFKRGKLRGLPEEELSADMYTLTQDLCEAAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    + P +WL+ V ++G  
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPRAPAAWLERVERDGTG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L +E  A E+LMM LRLREG+       LAGR LD     +L+  G I+     
Sbjct: 305 EGPRVRLDAEDHALEYLMMSLRLREGLDRGRHAALAGRPLDERRIADLREMGMID-TDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RIFATTEGRMVLNSVITALA 383


>gi|325141883|gb|EGC64325.1| hypothetical protein NMB9615945_1490 [Neisseria meningitidis
           961-5945]
          Length = 399

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N           +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 13  SFPNRTRLTALPPPSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 72

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 73  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 132

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 133 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 192

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +       +
Sbjct: 193 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALES 249

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 250 AGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 310 ALMQNRPSEAVERKTVAAEDLPFEFMMNALRLTDGVPTAMLQERTGVPSAKIMAQIETAR 369

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 370 QKGLLE-TDPAVFRPTEKGRLFLNDLL 395


>gi|261210032|ref|ZP_05924330.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
 gi|260840797|gb|EEX67339.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
          Length = 391

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKDDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+  T    +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERITFKPGIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     +  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLNDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFTDGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +++          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|229525146|ref|ZP_04414551.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae bv. albensis VL426]
 gi|229338727|gb|EEO03744.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae bv. albensis VL426]
          Length = 391

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+AK       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAKRIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S LG +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKLGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLATLN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALNEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|153828432|ref|ZP_01981099.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae 623-39]
 gi|148876141|gb|EDL74276.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae 623-39]
          Length = 391

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALNEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSEDDL-HWQITEKGKLFLNDLLEAFMA 387


>gi|254291166|ref|ZP_04961962.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae AM-19226]
 gi|150422860|gb|EDN14811.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae AM-19226]
          Length = 391

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLTRLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|261401086|ref|ZP_05987211.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria lactamica ATCC 23970]
 gi|269208978|gb|EEZ75433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria lactamica ATCC 23970]
          Length = 391

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + ++FFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETVFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEN 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +       HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPAMRCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEQGRLFLNDLL 387


>gi|194367045|ref|YP_002029655.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia
           R551-3]
 gi|194349849|gb|ACF52972.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           maltophilia R551-3]
          Length = 408

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/395 (34%), Positives = 217/395 (54%), Gaps = 10/395 (2%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA  ++        L +YVH P+CV+KCPYCDFNSH  + ++  + +I + L ++     
Sbjct: 17  SADHDSPPRLVPPPLSLYVHLPWCVRKCPYCDFNSHQAKGELPFDAYIDALLRDLDQDLP 76

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R + S+FFGGGTPSL  P+ I   L   +     + N EIT+E NP + E   F  
Sbjct: 77  LVWGRVVHSVFFGGGTPSLFPPEAIDRFLQQASARLRFAPNAEITLETNPGTAEHGRFDR 136

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQT 183
           YR AGVNR+S G+QS ++  L+ LGR H++ EA  A+ +A++      + DL+YALP+QT
Sbjct: 137 YRAAGVNRLSFGIQSFDDAMLKRLGRIHDSGEAERAVKMAQDAGYDNFNIDLMYALPEQT 196

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +   E +L+RA +    H+S YQLT+E  T+F+         +P E+ A D+    Q++ 
Sbjct: 197 LAGAEADLERAFALQPAHISHYQLTLEPNTVFFARPPQ---GIPDEDNAWDMQEHCQALL 253

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHP 301
           +  G   YE+S ++  G +S HNLNYWR+GDY+GIG GAH ++  G   H +     KHP
Sbjct: 254 AQAGFGQYEVSAYARPGRQSAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKLKHP 313

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECE 359
           +++L             E ++ E+   E+++  LRL EG  ++D+E   G  R++     
Sbjct: 314 QAYLDSAGTPAS-FGGDEVIAPERLPFEYMLNLLRLHEGFGLRDFESRTGLPRSVLDAPL 372

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               ++G+++      ++ T+ G    + V++   
Sbjct: 373 AEAVQRGWLDVTD-GHVQPTELGRRFTNDVVSLFL 406


>gi|147675539|ref|YP_001215981.1| coproporphyrinogen III oxidase [Vibrio cholerae O395]
 gi|146317422|gb|ABQ21961.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae O395]
 gi|227012308|gb|ACP08518.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           cholerae O395]
          Length = 391

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALNEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSEDDL-HWQITEKGKLFLNDLLEAFMA 387


>gi|153826545|ref|ZP_01979212.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-2]
 gi|149739637|gb|EDM53851.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-2]
          Length = 391

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKSGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWAISEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|153216271|ref|ZP_01950364.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 1587]
 gi|124114360|gb|EAY33180.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 1587]
          Length = 391

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGEPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GY  AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYSTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|307294008|ref|ZP_07573852.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
 gi|306880159|gb|EFN11376.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
          Length = 396

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/384 (46%), Positives = 245/384 (63%), Gaps = 10/384 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +YVHWPFCV KCPYCDFNSHV R  +  + +  + L ++     L G R +SSIF
Sbjct: 18  ADPLALYVHWPFCVSKCPYCDFNSHV-RADIDADAWRDALLKDLAHEAGLNGGRPLSSIF 76

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +  ++D  A++W  + ++EIT+EANPSSVE   F     AGVNR+SL
Sbjct: 77  FGGGTPSLMPPRIVEALIDAAARHWRPTPDIEITLEANPSSVEAARFADLAAAGVNRVSL 136

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+LE+++L FLGR H+  E +AA+ +A+++F R++FDLIYA P Q+   WE EL R L
Sbjct: 137 GLQALEDEALHFLGRAHDVREGLAALDVAQSVFGRVNFDLIYARPGQSEADWEAELARGL 196

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+  DHLSLYQLTIE GT F  +   G L+    + A  LY  TQ++T+A G+ AYEISN
Sbjct: 197 SFGTDHLSLYQLTIEPGTRFATLAAQGKLIPADPDHAATLYERTQAMTAAAGIPAYEISN 256

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G ES HNL YWRYGDY+G+GPGAH R       +A    K PE+W+  V +NGH +
Sbjct: 257 HARPGQESRHNLTYWRYGDYLGVGPGAHGR----RGGLATMRHKKPENWMNAVARNGHGL 312

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERV 371
             +E LS E +A E L+MGLRL EG+ +     L+G  +D     +    L   G + R 
Sbjct: 313 QSEEPLSPEDRAREALLMGLRLGEGVDLDRIARLSGLAVDALVDGKAVARLAGHGLV-RQ 371

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           Q  RL     GM +LD+++  +  
Sbjct: 372 QDQRLYVESAGMLLLDAILPEIVA 395


>gi|77464802|ref|YP_354306.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides 2.4.1]
 gi|77389220|gb|ABA80405.1| putative Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Rhodobacter sphaeroides 2.4.1]
          Length = 385

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 180/380 (47%), Positives = 242/380 (63%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGAETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVE   F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRATWPLANDLEVTLEANPGSVEAGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +AR  F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVARTTFDRVSFDLIYARQDQPLEHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F    K G L  LP E ++ D+Y LTQ +  A GL AYE+S
Sbjct: 185 TMAADHLSMYQLTVEDGTAFGDRFKRGKLRGLPEEELSADMYALTQDLCEAAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    + P +WL+ V ++G  
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPRAPAAWLERVERDGTG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L +E  A E+LMM LRLREG+       LAGR LD     +L+  G I+     
Sbjct: 305 EGPRVRLDAEDHALEYLMMSLRLREGLDRGRHAALAGRPLDERRVADLREMGMID-TDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RIFATTEGRMVLNSVITALA 383


>gi|126463645|ref|YP_001044759.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17029]
 gi|126105309|gb|ABN77987.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 385

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 179/380 (47%), Positives = 241/380 (63%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV    + Q  + +++L+E++ +   T  R ++S+F
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVA-ATIDQGRWQRAYLSEIRRLGTETEGRVLNSVF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +A IL+ +   W +++++E+T+EANP SVE   F+GYR AGVNRIS+
Sbjct: 65  FGGGTPSLMEPDLVAAILETVRTTWPLANDLEVTLEANPGSVEAGRFRGYRAAGVNRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA AA  +A   F R+SFDLIYA   Q +  W  EL  AL
Sbjct: 125 GIQALNDADLRKLGRLHTVAEARAAFDVAHTTFDRVSFDLIYARQDQPLEHWRSELTEAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DHLS+YQLT+E GT F    K G L  LP E ++ D+Y LTQ +  A GL AYE+S
Sbjct: 185 TMAADHLSMYQLTVEDGTAFGDRFKRGKLRGLPEEELSADMYALTQDLCEAAGLPAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GDY G+GPGAH R+   + R A    + P +WL+ V ++G  
Sbjct: 245 NHARPGAESRHNLIYWRGGDYAGVGPGAHGRLTFPTGRWATEAPRAPGAWLERVERDGTG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L +E  A E+LMM LRLREG+       LAGR LD     +L+  G I+     
Sbjct: 305 EGPRVRLDAEDHALEYLMMSLRLREGLDRGRHAALAGRPLDERRVADLREMGMID-TDDE 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G  +L+SVI  LA
Sbjct: 364 RIFATTEGRMVLNSVITALA 383


>gi|293394479|ref|ZP_06638775.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291422944|gb|EFE96177.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 383

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/383 (36%), Positives = 217/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     +T  RSI +IF G
Sbjct: 10  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDADLPMTSGRSIGTIFIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 70  GGTPSLLSAEAMQSLLDGVRARIRVNDDAEITMEANPGTVEADRFSGYQRAGVNRISIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 130 QSFSAEKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++    ++ SA G   YE S +
Sbjct: 190 LNPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFQQGHALLSAAGYQQYETSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +++     G  +
Sbjct: 246 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRIVRTAKTKHPRGFMQ-----GKYL 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  +++E +  EF M   RL E     ++    G +   +  + +  L +   +E  Q
Sbjct: 301 DKQHEVATEDRPFEFFMNRFRLLEAAPRAEFSAYTGLDESTIRPQLDAALAKGYLVETAQ 360

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T+RG   L+S++  L +
Sbjct: 361 --HWQITERGKLFLNSLL-ELFL 380


>gi|37525144|ref|NP_928488.1| coproporphyrinogen III oxidase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784570|emb|CAE13470.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 376

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 217/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L +++    +   R +++IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLKTDLPMVNGREVTTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  +LDG+     VS   EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSQAMQQLLDGVRALLPVSPQAEITMEANPGTVEADRFSGYQQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A HLA ++  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSPDKLVRLGRIHGPDEAKRAAHLAASLGLRSFNLDLMHGLPNQSLDEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F         VLP ++   D+++    + +A G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTSFGSRPP----VLPDDDALWDIFSQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTVKTKHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  + +E +  EF M   RL E +  +D+    G    ++  + ++ L   G++    
Sbjct: 297 DKQHQVENEDRPFEFFMNRFRLLEAMPKQDFSDFTGLSETSIRTQIKQALAA-GYLSETA 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + TQ+G   L+S++  L +
Sbjct: 356 -THWQITQKGKLFLNSLL-ELFL 376


>gi|172059922|ref|YP_001807574.1| coproporphyrinogen III oxidase [Burkholderia ambifaria MC40-6]
 gi|171992439|gb|ACB63358.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MC40-6]
          Length = 404

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPDHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQATA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|154254013|ref|YP_001414837.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parvibaculum lavamentivorans DS-1]
 gi|154157963|gb|ABS65180.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parvibaculum lavamentivorans DS-1]
          Length = 385

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 192/372 (51%), Positives = 248/372 (66%), Gaps = 2/372 (0%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +G      GVYVHWPFC  KCPYCDFNSHV    V Q  + ++   E+Q+MR LTGPRS+
Sbjct: 4   SGADEPGFGVYVHWPFCQSKCPYCDFNSHVVAN-VDQARWAKALTRELQYMRGLTGPRSV 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIFFGGGTPSL EP  +  +L  IA  WTV    EIT+EANP+SVE   F+GYRKAGVN
Sbjct: 63  RSIFFGGGTPSLTEPATVEAVLTQIAALWTVEQGAEITLEANPTSVEAARFRGYRKAGVN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQSL+++ L+FLGR H A EA+ AI LAR  FPR+SFDLIYA P QT  +W  EL
Sbjct: 123 RLSLGVQSLDDRELKFLGRLHTADEALRAIALARETFPRLSFDLIYARPGQTKEKWTAEL 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + AL++AVDHLSLYQLTIE+ T F ++++ G   LP E+ A +LY LT  I +  GL AY
Sbjct: 183 RAALAHAVDHLSLYQLTIEEETAFARLYEKGAFKLPGEDEAAELYALTGEIAAEAGLSAY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN++  GAE+ HNL YWRYGDY G+GPGAH R+     R+A    + P +W++ V ++
Sbjct: 243 EVSNYARPGAEARHNLVYWRYGDYAGVGPGAHGRISTEGKRLATRTLRMPGAWIENVERD 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           GH +   E +    Q DE ++MGLRL EG+S+  +  LAG+ +      NL   G + R 
Sbjct: 303 GHGLEASEEIPGAAQGDEMMLMGLRLEEGVSLARYAALAGKEIAAPRIGNLIADGLLMR- 361

Query: 372 QFSRLRCTQRGM 383
               +R T +G 
Sbjct: 362 NGDIIRTTPQGR 373


>gi|107022074|ref|YP_620401.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia AU 1054]
 gi|116689018|ref|YP_834641.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia HI2424]
 gi|170732307|ref|YP_001764254.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia MC0-3]
 gi|105892263|gb|ABF75428.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia cenocepacia AU 1054]
 gi|116647107|gb|ABK07748.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia cenocepacia HI2424]
 gi|169815549|gb|ACA90132.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia MC0-3]
          Length = 404

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 216/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   + +++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|297580594|ref|ZP_06942520.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535010|gb|EFH73845.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 206/389 (52%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPSYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSELLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWAISEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|325203752|gb|ADY99205.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Neisseria meningitidis M01-240355]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIDTALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEN 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +       HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPAMRCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T+RG   L+ ++
Sbjct: 362 QKGLLE-TNPAVFRPTERGRLFLNDLL 387


>gi|329120740|ref|ZP_08249402.1| coproporphyrinogen dehydrogenase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327460537|gb|EGF06873.1| coproporphyrinogen dehydrogenase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 124/375 (33%), Positives = 202/375 (53%), Gaps = 6/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q        R + +IFFG
Sbjct: 17  PLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG++ AG+ R+S+GV
Sbjct: 77  GGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+     ++Q A++ 
Sbjct: 137 QSFNDDMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQTALNDVQTAITT 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F          LP +  A+D+ +         G   YE S  +
Sbjct: 197 GATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEGAGFIHYETSAFA 253

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 254 KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 313

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ ++++    EF+M  LRL +G+     +   G      +      +++G +E    + 
Sbjct: 314 RKTVAADDLPFEFMMNALRLTDGVPAAMLQERTGVPAAKIMAQIETARQKGLLE-TNPTV 372

Query: 376 LRCTQRGMTMLDSVI 390
              T++G   L+ ++
Sbjct: 373 FCPTEQGRLFLNDLL 387


>gi|304388086|ref|ZP_07370215.1| possible coproporphyrinogen dehydrogenase [Neisseria meningitidis
           ATCC 13091]
 gi|304337943|gb|EFM04083.1| possible coproporphyrinogen dehydrogenase [Neisseria meningitidis
           ATCC 13091]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 127/387 (32%), Positives = 205/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + ++FFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETVFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEN 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +       HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPAMRCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T+RG   L+ ++
Sbjct: 362 QKGLLE-TNPAVFRPTERGRLFLNDLL 387


>gi|121603727|ref|YP_981056.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas naphthalenivorans CJ2]
 gi|120592696|gb|ABM36135.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaromonas naphthalenivorans CJ2]
          Length = 396

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 134/380 (35%), Positives = 214/380 (56%), Gaps = 8/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+C+KKCPYCDFNSH    ++ ++ +I + + +++    L   R++ SIF G
Sbjct: 22  PLSLYVHLPWCIKKCPYCDFNSHEAPGELPEQRYIDALVADLEASLPLVWGRTVHSIFIG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  PQ I  +L  I     + ++ EIT+EANP + E + F+ +  AGVNR+S+GV
Sbjct: 82  GGTPSLFSPQAIDRLLGDIRARLRLEADCEITLEANPGTFEKDRFRAFCSAGVNRLSIGV 141

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR H+ ++AIAA+  A   F   + D++YALP QT+     ++++AL+ 
Sbjct: 142 QSFDDVHLKALGRVHDRAQAIAAVEEAAQAFDTFNLDIMYALPGQTLENQAQDMRQALAM 201

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S+Y LTIE  T F K       ++P E+ A  + +    +T   GL  YE+S ++
Sbjct: 202 QPPHISIYHLTIEPNTYFAKFPP----LIPEEDTAYAMLDQITEMTEGAGLQRYEVSAYA 257

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNLNYW++GDY+GIG GAHS++      V     + P  ++      G+AV +
Sbjct: 258 RPGHRCFHNLNYWQFGDYLGIGAGAHSKLSFAHRVVRQVRAREPRLYMDKALA-GNAVAQ 316

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
           +  +S      EF++  LRL++G  ++D+    G       +     +R+G IER  F  
Sbjct: 317 ETEVSRADLPFEFMLNALRLKDGFKLQDFAEKTGLPFTAIQKGLEEAERKGLIER-DFVH 375

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            + T+RG   L+ + +    
Sbjct: 376 AKPTERGFDFLNDLQSLFLA 395


>gi|253995544|ref|YP_003047608.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           mobilis JLW8]
 gi|253982223|gb|ACT47081.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           mobilis JLW8]
          Length = 385

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 216/382 (56%), Gaps = 11/382 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRS 70
                L +Y+H P+CV+KCPYCDFNSH  RYK   + +  ++++ + +++        R 
Sbjct: 5   SNPPPLALYIHIPWCVQKCPYCDFNSHESRYKNGELPEAAYVEALIKDLELSTPKVWGRK 64

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SIFFGGGTPSL  P+ I  IL  +     +  + EIT+EANP +V++ NF GY++AGV
Sbjct: 65  IKSIFFGGGTPSLFSPEAIDTILSQVRALTPLEYDAEITLEANPGTVDIANFAGYKQAGV 124

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+QS     L+ LGR H+  +AI A  LA   F R++ D++Y LP+Q++     +
Sbjct: 125 NRLSLGIQSFNAGYLKALGRIHDDKQAIKAAELALATFDRVNLDVMYGLPQQSLADALAD 184

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++A+    DHLS Y LT+E  T FY         LP ++ + ++    ++  + HG   
Sbjct: 185 AKQAVQLNPDHLSFYHLTLEPNTPFY----HTPPNLPDDDTSAEMQIEIENFLAQHGYEH 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE S  +  G+++ HNLNYW++GDY+GIG GAHS++         +  KHP+++++    
Sbjct: 241 YETSAFAKTGSQARHNLNYWQFGDYLGIGAGAHSKLSYHDKITRETRPKHPKAYMEKALA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFI 368
            G+AV  +  +S +    EF+M  LRL +G+ +  ++   G NL       +  Q++  +
Sbjct: 301 -GNAVERESIVSQDALGFEFMMNALRLIDGVPLTLFQQHTGLNLMTLQPAIKAAQQKKLL 359

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +   ++ T  G   L+ ++
Sbjct: 360 T-TENGYIKPTLLGQRYLNELL 380


>gi|262191066|ref|ZP_06049273.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           CT 5369-93]
 gi|262033042|gb|EEY51573.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           CT 5369-93]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 206/389 (52%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPSYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWAISEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSE-DDQHWQITEKGKLFLNDLLEAFMA 387


>gi|170698510|ref|ZP_02889581.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
 gi|170136594|gb|EDT04851.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
          Length = 404

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSASGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|229519841|ref|ZP_04409275.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae TM 11079-80]
 gi|229343129|gb|EEO08113.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholerae TM 11079-80]
          Length = 391

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 142/389 (36%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
           S  L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   SPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKISLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+ +  G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTVTTGLTIDVIRPTLDWALNEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSEDDL-HWQITEKGKLFLNDLLEAFMA 387


>gi|163745106|ref|ZP_02152466.1| coproporphyrinogen III oxidase [Oceanibulbus indolifex HEL-45]
 gi|161381924|gb|EDQ06333.1| coproporphyrinogen III oxidase [Oceanibulbus indolifex HEL-45]
          Length = 388

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 178/377 (47%), Positives = 253/377 (67%), Gaps = 4/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV R ++ Q  +  ++L E+Q     T  R ++++FFGG
Sbjct: 14  FGLYIHWPFCEAKCPYCDFNSHVSR-QIDQSAWRDAYLAELQRAADETPGRILNAVFFGG 72

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P  +A I+  I ++W  ++++EIT+EANP SVE   F  YR+AGV+R+S+G+Q
Sbjct: 73  GTPSLMDPDVVADIIAAIRRHWPTANDLEITLEANPGSVEAGRFAAYRQAGVSRVSMGIQ 132

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+A EA+ A  +ARN F R+SFDLIY    QT  QWE EL++ALS A
Sbjct: 133 ALNDADLKRLGRLHSADEAMTAFDIARNTFERVSFDLIYGRQDQTAAQWEAELKQALSLA 192

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +DH+SLYQLTIE+GT F   +  G L  LP E++  D++ +TQ I +  G+ AYE+SNH+
Sbjct: 193 IDHISLYQLTIEQGTAFGDRYARGKLGGLPDEDLGADMFMMTQEICNEMGMPAYEVSNHA 252

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             GA+S HNL YWRYGDYIGIGPGAH R+ +   ++A     +P+ WL  V KN  A   
Sbjct: 253 RDGAQSRHNLIYWRYGDYIGIGPGAHGRLTLNGQKLATVAYSNPQRWLDGVAKNE-AEKP 311

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +  +S  +QA EFL+MGLRL+EG+ +  +  ++G  +D     +LQ  G  ER Q  RL 
Sbjct: 312 RVAISRGEQATEFLLMGLRLKEGVDLARYAAISGHAIDENAVAHLQDIGMAER-QGDRLI 370

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ +L++VI  L 
Sbjct: 371 VSDQGVIVLNAVIETLL 387


>gi|319786146|ref|YP_004145621.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464658|gb|ADV26390.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 384

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/389 (35%), Positives = 221/389 (56%), Gaps = 10/389 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  R ++  ++++ + + +++    L   R+
Sbjct: 1   MPDLIPPPLSLYVHLPWCVRKCPYCDFNSHGARGELPFDDYVAALVRDLEHDLPLVWGRT 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL     I  IL   +     + + EIT+EANP + E + F+GYR AGV
Sbjct: 61  VHSVFFGGGTPSLFPAAAIEAILSAASARLRFAPDAEITLEANPGTAEHDRFEGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+QS ++  L+ LGR H++ EA AA+ LA++  F  ++ DL+YALP Q +   E 
Sbjct: 121 NRISFGIQSFDDGCLQRLGRIHDSREAEAAVKLAQDAGFDNLNLDLMYALPGQDLAMAER 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    H+S YQLT+E  T+FY         +P +++A D+    Q++ +  G  
Sbjct: 181 DLERAFALQPAHISHYQLTLEPNTVFYARPPQ---GIPDDDLAWDIQEHCQALLAGAGYG 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VAISIEKHPESWLKM 307
            YE S ++  G +  HNLNYWRYGDY+GIG GAH ++ +G+ +  +     KHP +W+  
Sbjct: 238 HYETSAYARPGRQCAHNLNYWRYGDYLGIGAGAHGKITLGAEQAILRRWKHKHPATWMAA 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQ 365
              +  A+   + ++  Q+  E+++  LRL EG ++ D+E+  G             +  
Sbjct: 298 AGTDQ-AIGGNDRIAPAQRPFEYMLNALRLHEGFALADFEVRTGLPRARIAAALEQARAN 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++ +V   R+  T  G    + VI+   
Sbjct: 357 GWL-QVDDVRVAPTALGRRFANDVISLFL 384


>gi|190575705|ref|YP_001973550.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia K279a]
 gi|190013627|emb|CAQ47262.1| putative coproporphyrinogen III oxidase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 408

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 135/395 (34%), Positives = 217/395 (54%), Gaps = 10/395 (2%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA  +N        L +YVH P+CV+KCPYCDFNSH  + ++  + +I + L ++     
Sbjct: 17  SADHDNPPRLVPPPLSLYVHLPWCVRKCPYCDFNSHQAKGELPFDAYIDALLRDLDQDLP 76

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R + S+FFGGGTPSL  P+ I   L   +     + N EIT+E NP + E   F  
Sbjct: 77  LVWGRVVHSVFFGGGTPSLFPPEAIDRFLQQASARLRFAPNAEITLETNPGTAEHGRFDR 136

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQT 183
           YR AGVNR+S G+QS ++  L+ LGR H++ EA  A+ +A++      + DL+YALP+QT
Sbjct: 137 YRAAGVNRLSFGIQSFDDAMLKRLGRIHDSGEAERAVKMAQDAGYDNFNIDLMYALPEQT 196

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +   E +L+RA +    H+S YQLT+E  T+F+         +P E+ A D+    Q++ 
Sbjct: 197 LAGAEADLERAFALQPAHISHYQLTLEPNTVFFARPPQ---GIPDEDNAWDMQEHCQALL 253

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHP 301
           +  G   YE+S ++  G +S HNLNYWR+GDY+GIG GAH ++  G   H +     KHP
Sbjct: 254 AQAGFGQYEVSAYARPGRQSAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKLKHP 313

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECE 359
           +++L             + ++ E+   E+++  LRL EG  ++D+E   G  R++     
Sbjct: 314 QAYLDSAGTPAS-FGGNDVIAPERLPFEYMLNLLRLHEGFGLRDFESRTGLPRSVLDAPL 372

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               ++G+++      ++ T+ G    + V++   
Sbjct: 373 AEAVQRGWLDVTD-GHVQPTELGRRFTNDVVSLFL 406


>gi|270263063|ref|ZP_06191333.1| hypothetical protein SOD_d00780 [Serratia odorifera 4Rx13]
 gi|270042751|gb|EFA15845.1| hypothetical protein SOD_d00780 [Serratia odorifera 4Rx13]
          Length = 379

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 138/383 (36%), Positives = 216/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     L G R IS+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDADLPLAGGREISTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQSLLDGVRARIRVADDAEITMEANPGTVEADRFSGYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSAEKLTRLGRIHGPEEAKRAAHLATGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFERGHQLLSAAGYRQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTAKTKHPRGFMQ-----GKYM 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  +++  +  EF M   RL E     D+    G +   +  + +  L++ G++E   
Sbjct: 297 DKQHEVTTADRPFEFFMNRFRLLEAAPRADFAHYTGLDESVIRPQLDEALEK-GYLEETA 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 356 -EYWQITEKGKLFLNSLL-ELFL 376


>gi|261377934|ref|ZP_05982507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria cinerea ATCC 14685]
 gi|269145794|gb|EEZ72212.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria cinerea ATCC 14685]
          Length = 391

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 204/387 (52%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           ++AG+ R+S+G QS     L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KEAGITRLSIGAQSFNNDMLARLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVQ 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHVSAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEG 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+         G      +      +
Sbjct: 302 ALMQSQPSEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLHERTGVPAAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T++G   L+ ++
Sbjct: 362 QKGLLE-TDPTVFRPTEQGQLFLNDLL 387


>gi|241762328|ref|ZP_04760408.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241373122|gb|EER62761.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 393

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 175/386 (45%), Positives = 245/386 (63%), Gaps = 10/386 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +    L +Y+HWPFC+ KCPYCDFNSHV R  +    +  + L++M     LT  R +SS
Sbjct: 14  KQDMPLALYIHWPFCLAKCPYCDFNSHV-RPDIDAALWQDALLSDMAHEAALTQGRRLSS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+ P+ +A ++D   + W  + ++EIT+EANPSSVE + FQ    AGVNR+
Sbjct: 73  IFFGGGTPSLMPPETVAALIDAATRYWQPTPDIEITLEANPSSVEADRFQSLALAGVNRL 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG+Q+L++ SL FLGR HN  EA++A+ +A+  F R+SFDLIY  P Q++  WE EL++
Sbjct: 133 SLGIQALDDTSLHFLGRIHNVQEALSALDIAQKNFSRVSFDLIYGRPNQSLKDWEEELKQ 192

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++  DHLSLYQLTIE+GT F+ + + G       + A DL++LT+ +T A G+ AYEI
Sbjct: 193 ALAFGSDHLSLYQLTIEEGTRFHSLVRQGQFTPMDGDKAADLFDLTRDMTKAAGIPAYEI 252

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+   +ES HNL YWRYGDYIGIG GAH R             K PE+WL  V+K   
Sbjct: 253 SNHARKNSESRHNLTYWRYGDYIGIGAGAHGR----RLNNVTIRHKKPENWLSAVQKQQQ 308

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIE 369
            + E+  LS + QA E ++MGLRL EGI  K+ +   G +    LDI   +    QG + 
Sbjct: 309 GIQEETPLSPKDQAIEAVLMGLRLTEGIDPKNIQKRTGLDISEFLDIAAIQYYSDQGLLT 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                 LR T++G  + D++I  +++
Sbjct: 369 -FNNGLLRITEQGALLTDALIREISL 393


>gi|115350909|ref|YP_772748.1| coproporphyrinogen III oxidase [Burkholderia ambifaria AMMD]
 gi|115280897|gb|ABI86414.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia ambifaria AMMD]
          Length = 404

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|170693636|ref|ZP_02884794.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
 gi|170141418|gb|EDT09588.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
          Length = 409

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 214/380 (56%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     + +++ +   +++    L   R + ++F 
Sbjct: 32  PLSLYVHFPWCVRKCPYCDFNSHEWKGDTFPENDYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A + F   + DL++ALP+QT+ + + ++  ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSTQARRAVEVAASTFDNFNLDLMFALPQQTLAECQADIDTALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +  Q  TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIQERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 268 AKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPATFIEQAKA-GAAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G  +       +  +R+  I R    
Sbjct: 327 EEHEVGPRDLPFEFMLNALRLVEGFPVHRFIERTGLPMTSIEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           ++  T  G   L+ + A   
Sbjct: 386 KIAPTPLGQAFLNDLQALFL 405


>gi|325524720|gb|EGD02707.1| coproporphyrinogen III oxidase [Burkholderia sp. TJI49]
          Length = 404

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTLDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPISTIEPALKEAERRGLIAR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|226940859|ref|YP_002795933.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
 gi|226715786|gb|ACO74924.1| Probable porphyrin oxidoreductase [Laribacter hongkongensis HLHK9]
          Length = 406

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/379 (35%), Positives = 203/379 (53%), Gaps = 7/379 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+C+KKCPYCDFNSH  R  V +  +I + L ++     L   RS+ ++F G
Sbjct: 20  PLSLYVHVPWCLKKCPYCDFNSHGVRGPVDEAGYIDALLADLDQSLPLVWGRSLKTVFIG 79

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +    +L G+     +    EIT+EANP + E   F+ YR AG+NR+S+G+
Sbjct: 80  GGTPSLLSAEAFDRLLSGVRARLKLDPQAEITLEANPGTAEAGRFREYRAAGINRLSIGI 139

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ L  LGR H+  EA  A  LA + F   + DL+YALP QT+ + + ++  A+++
Sbjct: 140 QSFDDRFLHALGRVHDGKEAHLAADLAADTFDTFNLDLMYALPGQTLAEAQADVTAAVAH 199

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y LT+E  TLF          LP ++ + D+    ++  +  G   YE S  +
Sbjct: 200 RPTHLSCYHLTLEPNTLFAAAPP---AGLPDDDTSADMQEAIEARLAEAGFCHYETSAFA 256

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNLNYW +GDY+GIG GAH ++      V     K P+++L+ V + G AV  
Sbjct: 257 RPGFESRHNLNYWTFGDYLGIGAGAHGKISFADRIVRQMKHKQPQAYLEAVAR-GQAVQN 315

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSR 375
           +  ++   +  EF+M  LRL  G+    +    G  L           RQG ++    +R
Sbjct: 316 EHEIAVVDRPFEFMMNALRLTGGVPTPLFSERTGVPLARISRELAEAVRQGLLD-ADPAR 374

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T +G   L+ ++    
Sbjct: 375 LAPTPQGQRFLNDLLTLFL 393


>gi|221201199|ref|ZP_03574239.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2M]
 gi|221206347|ref|ZP_03579360.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2]
 gi|221213627|ref|ZP_03586601.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD1]
 gi|221166416|gb|EED98888.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD1]
 gi|221173656|gb|EEE06090.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2]
 gi|221179049|gb|EEE11456.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia multivorans CGD2M]
          Length = 404

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/381 (33%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT  +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTFDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +       HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHRCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFMEQALA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALQEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  T  G   L+  +  L +
Sbjct: 382 RIAPTPLGQRFLND-LQELFL 401


>gi|94496908|ref|ZP_01303482.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingomonas sp. SKA58]
 gi|94423584|gb|EAT08611.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingomonas sp. SKA58]
          Length = 393

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/383 (45%), Positives = 235/383 (61%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+HWPFCV KCPYCDFNSHV R  +  + +  + L +M     LTG R ++SIF
Sbjct: 15  TEPLALYIHWPFCVSKCPYCDFNSHV-REGIDVDAWRGALLADMAHEAALTGGRPLTSIF 73

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A ++    + W ++ + EIT+EANP+SVE   F     AGVNR+SL
Sbjct: 74  FGGGTPSLMPPALVADLIAAADRQWGLAPDSEITLEANPNSVEAARFADLAAAGVNRVSL 133

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L+  +L FLGR H+  E +AA+  A+ +F R+SFDLIYA P Q+   WE EL RAL
Sbjct: 134 GLQALDNDALHFLGRAHDVDEGLAALATAQRVFDRVSFDLIYARPGQSEADWEAELARAL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +   HLSLYQLTIE GT F  +   G L     +    LY LTQS+T A G+ AYEISN
Sbjct: 194 GFGTGHLSLYQLTIEPGTRFATLVAQGKLTPADPDHGATLYELTQSMTVAAGIPAYEISN 253

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G ES HNL YWRYGDY GIGPGAH R        A    K PE+W+  V +NGH  
Sbjct: 254 HARPGQESRHNLTYWRYGDYAGIGPGAHGR----RTGQATVRHKKPENWMNAVARNGHGA 309

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIERV 371
             +E L+ E +A E L+MGLRLREG+ ++     +G  +    D      L   G ++R 
Sbjct: 310 QGEEPLADEDRAREALLMGLRLREGVDLRRIASESGITISQLVDDLAVARLMEIGLMDR- 368

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           Q S ++ T  GM +LD+++  + 
Sbjct: 369 QESHIQVTPAGMLLLDAILPEIV 391


>gi|297537274|ref|YP_003673043.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
 gi|297256621|gb|ADI28466.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
          Length = 382

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/375 (34%), Positives = 209/375 (55%), Gaps = 11/375 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSI 71
               L +Y+H P+CVKKCPYCDFNSH  R+K   + +  ++ + + +++        R I
Sbjct: 3   NPPPLSLYIHIPWCVKKCPYCDFNSHESRHKDGAIPESAYVDALIADLELATPKVWGRKI 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTPSL   + I  IL  +     +  + EIT+EANP +V+  NF GY++AGVN
Sbjct: 63  KSVFFGGGTPSLFSAEAIDRILSHVRMLTPLEFDAEITLEANPGTVDAANFVGYKQAGVN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+QS +   L+ LGR H++ +A AA+ LA   F +++ D++Y LP Q++     + 
Sbjct: 123 RLSLGIQSFKSDYLKALGRIHDSEQAFAAVELAMKTFDQVNCDIMYGLPNQSLEDAMQDA 182

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q A+     HLS Y LT+E  T FY+        LP ++ + D+    +++ + +G   Y
Sbjct: 183 QTAVRLNPTHLSFYHLTLEPNTPFYRTPP----SLPDDDTSSDMQIAIETLLAENGYEHY 238

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E S  +  G ++ HNLNYW++GDY+GIG GAHS++            KHP+++++   + 
Sbjct: 239 ETSAFAKKGKQAKHNLNYWQFGDYLGIGAGAHSKLSYHDKITREVRPKHPKAYMEQALQ- 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
           G AV  +  +   +   EF+M  LRL +G+ V  ++   G N+       +  Q +G + 
Sbjct: 298 GKAVEREWLIPQNELGFEFMMNALRLIDGVPVDLFQQRTGLNIRTLQAAIKTAQSKGLL- 356

Query: 370 RVQFSRLRCTQRGMT 384
            ++   ++ T  G  
Sbjct: 357 IIEAGNIQPTLLGQR 371


>gi|213424104|ref|ZP_03356997.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 573

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 201 PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 260

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 261 GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 320

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 321 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 380

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 381 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 436

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 437 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 491

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 492 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 550

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 551 QYWQITRHGKLFLNSLL-ELFL 571


>gi|325275641|ref|ZP_08141540.1| HemN family oxidoreductase [Pseudomonas sp. TJI-51]
 gi|324099228|gb|EGB97175.1| HemN family oxidoreductase [Pseudomonas sp. TJI-51]
          Length = 391

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 212/381 (55%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + LT++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVAALLTDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    ++++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSAGALGRLLRGVEQRIPFAADIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLQALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLEDALGDLRQAMD 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMAEHGFRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+      + P+ +L + +      
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKPYK--- 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L+   E  R  +++G + +V+ 
Sbjct: 311 AGEKLLPVDELPFEFLMNALRLTDGVEAQLFTQRTGLPLEQLREARRAAEQKGLL-QVES 369

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG   L+ ++    
Sbjct: 370 DRLVATPRGQLFLNDLLQYFL 390


>gi|167036140|ref|YP_001671371.1| coproporphyrinogen III oxidase [Pseudomonas putida GB-1]
 gi|166862628|gb|ABZ01036.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida GB-1]
          Length = 391

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 209/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSANALGRLLRGVEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLEALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMTEHGYRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+      + P+ +L + +      
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKPFK--- 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L+   E  R  +++G + +V+ 
Sbjct: 311 AGEKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLEQLREARRAAEQKGLL-QVEP 369

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG   L+ ++    
Sbjct: 370 DRLVATPRGQLFLNDLLQYFL 390


>gi|154246478|ref|YP_001417436.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Xanthobacter autotrophicus Py2]
 gi|154160563|gb|ABS67779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Xanthobacter autotrophicus Py2]
          Length = 399

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 191/389 (49%), Positives = 257/389 (66%), Gaps = 8/389 (2%)

Query: 12  TGQGSNS------LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            G+G++        GVYVHWPFC  KCPYCDFNSHVR     +  FI +F  E+  MR L
Sbjct: 12  AGEGASPVPDPAGFGVYVHWPFCKAKCPYCDFNSHVRHAPPDEARFIAAFRREIAHMRAL 71

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +GP+   ++FFGGGTPSL+ P  +A IL+ I   W ++++ E+T+EANP+SVE   F GY
Sbjct: 72  SGPKQAQTVFFGGGTPSLMAPATVAAILEAINAAWPLTADAEVTLEANPTSVEAERFAGY 131

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
             AGVNR+SLGVQ+L +  L+ LGR H+ +EA+AA+ +AR  F R+SFDLIYA P+QT  
Sbjct: 132 GAAGVNRVSLGVQALHDADLQGLGRMHSVAEALAAVAIARRAFRRVSFDLIYARPRQTPE 191

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W  EL+RAL+   +HLSLYQLTIE GT F +++  G L+LP ++++  L+++TQ +T+ 
Sbjct: 192 GWAAELRRALAEGCEHLSLYQLTIEPGTPFERLYGAGKLILPDDDISRALWDVTQEVTAQ 251

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            GL AYE+SNH+  GAE+ HN  YWRYG Y GIG GAH R+ V   R A+  E+ PE WL
Sbjct: 252 AGLPAYEVSNHARPGAEARHNQIYWRYGTYAGIGAGAHGRLVVDGTRRALFTERAPEDWL 311

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             V  +GH +V  E LS+ +QADE L+MGLRL+EG+ +     L GR +D      L   
Sbjct: 312 ARVEAHGHGIVSDEALSAAEQADEMLLMGLRLKEGVDLARHARLGGR-VDEARIAALAAA 370

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           GF+ R    RL  T  G  +L++VIA LA
Sbjct: 371 GFVTRT-GDRLAVTPAGFPVLNAVIAQLA 398


>gi|121590701|ref|ZP_01678033.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 2740-80]
 gi|121547432|gb|EAX57541.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae 2740-80]
          Length = 391

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + IA +L G+AK       +EIT+EANP ++E   F GYR AGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAKRIAFKPEIEITMEANPGTIEAQRFAGYRTAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +
Sbjct: 124 RISIGVQSFEPEKLARLGRIHGQQEAVRAALLAHQIGLNSFNLDLMHGLPDQTPEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   
Sbjct: 184 LDQAIALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S LG +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  + 
Sbjct: 240 YEISGYSKLGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALN 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
               A ++ E L + + +  EF M   RL E     D+    G  +D+          +G
Sbjct: 300 NLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        + T++G   L+ ++     
Sbjct: 360 YLSEDDL-HWQITEKGKLFLNDLLEAFMA 387


>gi|146284286|ref|YP_001174439.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri A1501]
 gi|145572491|gb|ABP81597.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas stutzeri A1501]
          Length = 392

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/398 (34%), Positives = 220/398 (55%), Gaps = 15/398 (3%)

Query: 4   LSAYENNMTGQGS---NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++A     TGQG      L  YVH P+CV+KCPYCDFNSH     + +E ++ + L +++
Sbjct: 2   IAASPAPATGQGRFELPPLAAYVHIPWCVRKCPYCDFNSHTAGPALPEEAYVAALLADLR 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              +    R +SSIFFGGGTPSL   + +A I++G+      +  +EIT+EANP + E  
Sbjct: 62  ADLEHVQGRRLSSIFFGGGTPSLFSARALAAIVEGLEHLVGFADGIEITLEANPGTFEQA 121

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
            F+ YR+ G+NR+S+GVQS +   L+ LGR H+  EAI A  +AR   F   + DL++ L
Sbjct: 122 KFRDYRQLGINRLSIGVQSFQAAKLKALGRIHDGDEAIRAADMARAAGFENFNLDLMHGL 181

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++     +L+ A++    HLS YQLT+E  TLF+         LP +++  D+    
Sbjct: 182 PDQSLEDALSDLRTAIAQQPTHLSWYQLTLEPNTLFWSQPP----QLPEDDILWDIQEAG 237

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE- 298
           Q++   HG   YE S ++  G ++ HNLNYW +GD++GIG GAH+++     R+  S + 
Sbjct: 238 QALLGEHGYRQYETSAYAQPGRQARHNLNYWTFGDFLGIGAGAHAKLSHADGRILRSWKT 297

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           + P+ +L   +        ++ L++++   EFLM  LRL +G+    +    G  LD   
Sbjct: 298 RLPKDYLDPAKAFR---AGEKQLTADELPFEFLMNVLRLTDGVPAVLFTQRTGLALDAIA 354

Query: 359 E--RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  R+ + +G +      RL  T +G   L+ ++ +  
Sbjct: 355 KPRRDAEARGLLSN-DPDRLVATPKGQLFLNDLLQSFL 391


>gi|254246046|ref|ZP_04939367.1| Coproporphyrinogen III oxidase [Burkholderia cenocepacia PC184]
 gi|124870822|gb|EAY62538.1| Coproporphyrinogen III oxidase [Burkholderia cenocepacia PC184]
          Length = 404

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 216/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   + +++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAVKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|315181251|gb|ADT88165.1| hypothetical oxygen-independent coproporphyrinogen III oxidase
           [Vibrio furnissii NCTC 11218]
          Length = 390

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 205/389 (52%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  +  + +  +I + L +    ++  +    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKADIPETEYIDALLEDLDTDIERYQLAGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L GI        ++EIT+EANP ++E   F GYR+ GV 
Sbjct: 64  HSIFIGGGTPSLISPDGIGRLLRGIEARIAFKPDIEITMEANPGTIEAERFAGYRQVGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT+ Q   +
Sbjct: 124 RISIGVQSFEPEKLTRLGRIHGRDEAVKAAQLAHQIGLNSFNLDLMHGLPDQTLEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A  HLS YQLTIE  TLFY         LP ++   D++ L     +A G   
Sbjct: 184 LESAIELAPPHLSWYQLTIEPNTLFYFKPP----TLPDDDALWDIFELGHQKLTAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
                 ++ E L ++  +  EF M   RL E     D+    G  + +          Q 
Sbjct: 300 NLAKPYLDSEQLVADVDRPFEFFMNRFRLIEPCPKADFSATTGLPISVIQPTLDRAIEQE 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           F+   + +  + T++G   L+ ++     
Sbjct: 360 FLSETE-THWQITEKGKLFLNDLLEAFMA 387


>gi|323527038|ref|YP_004229191.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
 gi|323384040|gb|ADX56131.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
          Length = 409

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/380 (34%), Positives = 216/380 (56%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   + +++ +   +++    L   R + ++F 
Sbjct: 32  PLSLYVHFPWCVRKCPYCDFNSHEWKGETFPENDYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A + F   + DL++ALP+QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSTQARRAVEVAASTFDNFNLDLMFALPRQTLAECQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYGRYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYW +GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 268 AKPHRQSKHNLNYWGFGDYLGIGAGAHTKLSFPNRVLRQARYKHPATFIEQAKA-GAAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +S+     EF++  LRL EG  V  +    G  +       +  +R+  I R    
Sbjct: 327 EEHEVSARDLPFEFMLNALRLVEGFPVHRFIERTGLPMTSVEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           ++  T  G   L+ + A   
Sbjct: 386 KIAPTPLGQAFLNDLQALFL 405


>gi|186475431|ref|YP_001856901.1| coproporphyrinogen III oxidase [Burkholderia phymatum STM815]
 gi|184191890|gb|ACC69855.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phymatum STM815]
          Length = 404

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 217/380 (57%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     ++ ++ +  ++++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHESKGGTFPEDEYLDALRSDLERSLPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLMSAKGLDRLLSDVRALLPLDADAEITLEANPGTFEAEKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A N F   + DL++ALPKQT+ + + +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDSTQARHAVEVAANTFGNFNLDLMFALPKQTLAECQADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K        LP ++ + D+ +     T   G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----PLPDDDSSADMQDWIHERTREAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +     KHP ++++  R  G+AV 
Sbjct: 264 AKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQMRYKHPATFIEEARS-GNAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F 
Sbjct: 323 EEHEVGARDLPFEFMLNALRLVEGFPVHRFIERTGLPITSIEPALQEAERRGLITR-DFE 381

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           ++  T  G   L+ + A   
Sbjct: 382 KIAPTPLGQAFLNDLQALFL 401


>gi|260753400|ref|YP_003226293.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552763|gb|ACV75709.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 393

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 175/386 (45%), Positives = 247/386 (63%), Gaps = 10/386 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +    L +Y+HWPFC+ KCPYCDFNSHV R  +    +  + L++M     LT  R +SS
Sbjct: 14  KQDMPLALYIHWPFCLAKCPYCDFNSHV-RPDIDAALWQDALLSDMAHEAALTQGRRLSS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+ P+ +A ++D   + W  +S++EIT+EANPSSVE + FQ    AGVNR+
Sbjct: 73  IFFGGGTPSLMSPETVAALIDAATRYWQPTSDIEITLEANPSSVEADRFQSLALAGVNRL 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG+Q+L++ SL FLGR HN  EA++A+ +A+  F R+SFDLIY  P Q++  WE EL++
Sbjct: 133 SLGIQALDDTSLHFLGRIHNVQEALSALDIAQKNFSRVSFDLIYGRPNQSLKDWEEELKQ 192

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++  DHLSLYQLTIE+GT F+ + + G       + A DL++LT+ +T A G+ AYEI
Sbjct: 193 ALAFGSDHLSLYQLTIEEGTRFHSLVRQGQFTPMDGDKAADLFDLTRDMTKAAGIPAYEI 252

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+   +ES HNL YWRYGDYIGIG GAH R             K PE+WL  V+K   
Sbjct: 253 SNHARKNSESRHNLTYWRYGDYIGIGAGAHGR----RLNNVTIRHKKPENWLSAVQKQQQ 308

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIE 369
            + E+  LS + QA E ++MGLRL EGI  ++ +   G +    LDI   +    QG + 
Sbjct: 309 GIQEETPLSPKDQAIEAVLMGLRLTEGIHPENIQKRTGLDISEFLDIAAIQYYSDQGLLT 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                 LR T++G+ + D++I  +++
Sbjct: 369 -FNNGLLRITEQGVLLTDALIREISL 393


>gi|50122553|ref|YP_051720.1| coproporphyrinogen III oxidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613079|emb|CAG76530.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pectobacterium atrosepticum SCRI1043]
          Length = 379

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 216/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L G R++ SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLAGGRALHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPEEAKRAAQLATGLKLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGHILRTVKVRHPRGYMQ-----GTYM 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  ++++ +  EF M   RL E     D+    G    ++  + ++ L  QG++    
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPRADFTAYTGLEEHSIRPQLDQAL-AQGYLTETA 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + T+ G   L+S++  L +
Sbjct: 356 -THWQITEHGKLFLNSLL-ELFL 376


>gi|227325981|ref|ZP_03830005.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 379

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 137/384 (35%), Positives = 215/384 (55%), Gaps = 19/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDDRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERV 371
            ++  ++++ +  EF M   RL E    +D+    G  LD  C R        QG++   
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPREDFTAYTG--LDEHCIRPQLDLALAQGYLTET 354

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             +  + T+ G   L+S++  L +
Sbjct: 355 A-THWQITEHGKLFLNSLL-ELFL 376


>gi|167563699|ref|ZP_02356615.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis EO147]
 gi|167570849|ref|ZP_02363723.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis C6786]
          Length = 405

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/381 (33%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEQALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS +E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFDESHLKALGRIHDAAQARAAVEIAARTFDNFNLDLMFALPNQTLDECRTDLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 SFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQAGYERYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV
Sbjct: 264 YAKPHRQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GAAV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL EG+    +    G +L          +R+G I     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVEGVPTHSFAERTGMSLAAIGPALAEAERRGLIVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|161525575|ref|YP_001580587.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|189349697|ref|YP_001945325.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|160343004|gb|ABX16090.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
 gi|189333719|dbj|BAG42789.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
          Length = 404

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 128/381 (33%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS +E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT  +   +++ ALS
Sbjct: 148 IQSFDEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTFDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +       HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHRCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEHALA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFVERTGLPISTIEPALQEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  T  G   L+  +  L +
Sbjct: 382 RIAPTPLGQRFLND-LQELFL 401


>gi|326387917|ref|ZP_08209523.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207963|gb|EGD58774.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 384

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 183/384 (47%), Positives = 251/384 (65%), Gaps = 14/384 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFC+ KCPYCDFNSHV R +V    + ++ L +M     LTG R++ SIFF
Sbjct: 2   EPLALYIHWPFCLAKCPYCDFNSHV-RDRVDVAAWQEALLADMAHEASLTGGRTLGSIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ PQ +  +L   A++W+ + N+EIT+EANPSSVE   F     AGVNR+SLG
Sbjct: 61  GGGTPSLMPPQLVETLLSAAARHWSFAPNIEITLEANPSSVEAARFAALAGAGVNRVSLG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L++++LRFLGR H+A E +AA+ +A+  F R+SFDLIYA P QT  QW+ EL RAL 
Sbjct: 121 LQALDDETLRFLGRLHDAREGLAALEVAQRHFARVSFDLIYARPGQTPEQWQAELDRALG 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLSLYQLTIE GT F  + ++G L    ++ A DL+ LT+ +T+A G+ AYEISNH
Sbjct: 181 FGTGHLSLYQLTIEPGTRFATLVREGKLEPLDDDAAADLFTLTRDMTAAAGIPAYEISNH 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHA 314
           +  G ES HNL YWRYGDY+GIGPGAH R      R+A +  +H  PE+WL  + ++GH 
Sbjct: 241 ARPGEESRHNLTYWRYGDYVGIGPGAHGR------RLAQATVRHRKPENWLAAIDRDGHG 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           + E+  L+  +QA E L+MGLRL EGI +       G      +D +  R  +  G +  
Sbjct: 295 IAEQRPLALGEQASEALLMGLRLGEGIDLAALSKRFGLPQEALIDPDKARFYRDLGLVSE 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +   RL  T RGM +LD+++  L 
Sbjct: 355 I-HGRLVVTPRGMPLLDALLGELV 377


>gi|256752138|ref|ZP_05493004.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748952|gb|EEU61990.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 375

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 207/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L  M+     T   ++ S++ 
Sbjct: 2   REIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALL--MEIESNSTKDYNVVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+ +G+NR+S+G
Sbjct: 59  GGGTPNLLPPSYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKGSGINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L+++GR H   E      L +  F  ++ DL+YALP QT  +W+  L+  + 
Sbjct: 119 LQAFQNRLLKYIGRIHTVEEFFGNYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN 
Sbjct: 179 LQPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HN+ YW   +Y+G G GAHS +    +    S  ++ + ++K + +   AV 
Sbjct: 239 ALPTFECRHNILYWECKNYLGFGAGAHSYMADVRY----SNIENIKDYIKSILERKSAVK 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           EK  L+ + +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q   ++G IE +  
Sbjct: 295 EKIKLTKQDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEIYKKVIQKYLKEGLIE-IDN 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             ++ T+RG+ + + +     
Sbjct: 354 ECVKLTERGIDVSNVIFEEFL 374


>gi|206561361|ref|YP_002232126.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia J2315]
 gi|198037403|emb|CAR53338.1| putative coproporphyrinogen III oxidase family protein
           [Burkholderia cenocepacia J2315]
          Length = 404

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 215/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GAAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|170719551|ref|YP_001747239.1| coproporphyrinogen III oxidase [Pseudomonas putida W619]
 gi|169757554|gb|ACA70870.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida W619]
          Length = 395

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/381 (34%), Positives = 206/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + LT++         R ISSIFFG
Sbjct: 22  PLALYIHIPWCVRKCPYCDFNSHAAGPDLPEEAYVDALLTDLDQELPAVQGRPISSIFFG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +      ++EIT+EANP + E   F+ YR+ G+NR+S+GV
Sbjct: 82  GGTPSLFSANALGRLLRGVEQRIPFEPDIEITLEANPGTFEQEKFKAYRQTGINRLSIGV 141

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 142 QSFQPAKLQALGRIHNGDEAIRAAGMARAAGFDNFNMDLMHGLPDQSLNDALGDLRQAID 201

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ +AHG   YE+S +
Sbjct: 202 LGPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMAAHGYKQYEVSAY 257

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH +      R+      + P+ +L + +      
Sbjct: 258 AQPGRAAKHNLNYWCFGDFIGIGAGAHGKQTFADGRILRTWKTRLPKDYLNLAKPFK--- 314

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L    E  R  +++G + +V+ 
Sbjct: 315 AGEKLLPVDELPFEFLMNALRLTDGVEAELFSQRTGLPLVQLAEARRAAEQKGLL-QVEP 373

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG   L+ ++    
Sbjct: 374 DRLVATPRGQLFLNDLLQYFL 394


>gi|126438587|ref|YP_001059968.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 668]
 gi|167720745|ref|ZP_02403981.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei DM98]
 gi|217420410|ref|ZP_03451915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 576]
 gi|237813384|ref|YP_002897835.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei MSHR346]
 gi|254181026|ref|ZP_04887624.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1655]
 gi|254298854|ref|ZP_04966304.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 406e]
 gi|126218080|gb|ABN81586.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 668]
 gi|157808917|gb|EDO86087.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 406e]
 gi|184211565|gb|EDU08608.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1655]
 gi|217395822|gb|EEC35839.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 576]
 gi|237505440|gb|ACQ97758.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei MSHR346]
          Length = 405

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 AFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G  V
Sbjct: 264 YAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTPV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +E   G +L          +++G +     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|26991777|ref|NP_747202.1| coproporphyrinogen III oxidase [Pseudomonas putida KT2440]
 gi|24986887|gb|AAN70666.1|AE016710_11 oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas putida KT2440]
          Length = 391

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 208/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 18  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 78  GGTPSLFSASALGRLLRGVEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 137

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 138 QSFQPAKLEALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ + HG   YE+S +
Sbjct: 198 LGPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMAEHGYRQYEVSAY 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+      + P+ +L + +      
Sbjct: 254 AQAGRAARHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAK---PFR 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L    E  R  +++G + +V+ 
Sbjct: 311 AGEKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLAQLQEARRAAEQKGLL-QVEP 369

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG   L+ ++    
Sbjct: 370 DRLVATPRGQLFLNDLLQYFL 390


>gi|167037805|ref|YP_001665383.1| coproporphyrinogen III oxidase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|167040705|ref|YP_001663690.1| coproporphyrinogen III oxidase [Thermoanaerobacter sp. X514]
 gi|300914746|ref|ZP_07132062.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X561]
 gi|307724020|ref|YP_003903771.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X513]
 gi|320116224|ref|YP_004186383.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166854945|gb|ABY93354.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X514]
 gi|166856639|gb|ABY95047.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300889681|gb|EFK84827.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X561]
 gi|307581081|gb|ADN54480.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter sp. X513]
 gi|319929315|gb|ADV80000.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 375

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 206/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L  M+     T   ++ S++ 
Sbjct: 2   REIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALL--MEIESNSTKDYNVVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+  G+NR+S+G
Sbjct: 59  GGGTPNLLPPSYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKDNGINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L+++GR H   E      L +  F  ++ DL+YALP QT  +W+  L+  + 
Sbjct: 119 LQAFQNRLLKYIGRIHTVEEFFGNYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN 
Sbjct: 179 LQPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HN+ YW   +Y+G G GAHS +    +    S  ++ + ++K + +   AV 
Sbjct: 239 ALPTFECRHNILYWECKNYLGFGAGAHSYMADVRY----SNIENIKDYIKSILERKSAVK 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           EK  L+ + +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q   ++G IE +  
Sbjct: 295 EKIKLTKQDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEIYKKVIQKYLKEGLIE-IDN 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             ++ T+RG+ + + +     
Sbjct: 354 ECVKLTERGIDVSNVIFEEFL 374


>gi|296269131|ref|YP_003651763.1| oxygen-independent coproporphyrinogen III oxidase [Thermobispora
           bispora DSM 43833]
 gi|296091918|gb|ADG87870.1| oxygen-independent coproporphyrinogen III oxidase [Thermobispora
           bispora DSM 43833]
          Length = 403

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/396 (33%), Positives = 189/396 (47%), Gaps = 18/396 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
            + + G GS   G YVH PFC  +C YCDFN++             +  + + E++  R+
Sbjct: 16  ASALDGLGSRPFGFYVHVPFCATRCGYCDFNTYTAAELGPGASPAGYADTVIQEVRLARR 75

Query: 65  LTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G     + ++FFGGGTP+L+   ++  IL  IA  + ++   E+T EANP SV     
Sbjct: 76  VLGDAAPRVETVFFGGGTPTLLPAADLVRILRAIAGEFGLAPGAEVTTEANPESVSPAYL 135

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R  G  R+S G+QS  E  LR L R H    A+ A+  A    F  ++ DLIY  P 
Sbjct: 136 EELRAGGFTRVSFGMQSAREHVLRVLDRRHTPGRAVQAVREAHAAGFAHVNLDLIYNTPG 195

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W   L+ AL+   DH+S Y L +E GT      + G+L +P E+VA D Y + + 
Sbjct: 196 ESDDDWRATLETALAAGPDHVSAYSLIVEDGTRLAARVRRGELPMPDEDVAADRYLIAEE 255

Query: 242 ITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + SA G   YEISN +   A    HNL YW  GD+ G GPGAH  V            KH
Sbjct: 256 LLSAAGFRWYEISNWARTEAGRCRHNLLYWTSGDWWGAGPGAHGHVGGTR----WWNVKH 311

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +   +         +E L+ E++A E +M+ LRL  G+ +              C R
Sbjct: 312 PARYAARLAAGKSPAQAREVLTPEERATERIMLELRLATGLPLDAI----PPGARPACAR 367

Query: 361 NLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
            L   G +E   F   R   T RG  + DSV  +L 
Sbjct: 368 AL-ADGLLEVEPFKAGRAVLTLRGRLLADSVARDLV 402


>gi|114769779|ref|ZP_01447389.1| coproporphyrinogen III oxidase [alpha proteobacterium HTCC2255]
 gi|114549484|gb|EAU52366.1| coproporphyrinogen III oxidase [alpha proteobacterium HTCC2255]
          Length = 384

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/381 (46%), Positives = 262/381 (68%), Gaps = 3/381 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR+  V Q  ++ +   E++     T  R++++IF
Sbjct: 6   NGGFGIYIHWPFCAAKCPYCDFNSHVRK-SVDQSRWLSAICLELKNSAIRTRGRTVNTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP+ +A I+  IAK W ++ ++EI++EANP+SVE   F  +RKAG+NRIS+
Sbjct: 65  FGGGTPSLMEPETVAGIIKEIAKLWVLALDIEISLEANPTSVEAQKFSDFRKAGINRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL    L+ LGR H+ +EA  A  +A++ F R+SFDLIYA   Q+   WE+EL+ A 
Sbjct: 125 GIQSLRNDDLKALGRMHSVNEARKAFDIAKDNFKRVSFDLIYARQDQSKVDWEIELKEAS 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S AVDHLSLYQLTIE GT F  +++ G L  +P++++A D+Y++TQ +T  + + AYEIS
Sbjct: 185 SMAVDHLSLYQLTIEDGTRFGDLYERGSLKGMPNDSLAADMYDITQEVTLQNDMPAYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDYIG+GPGAH R+    +++A +  ++PE+WL+ V  NG +
Sbjct: 245 NHAIEGAESRHNLIYWRYGDYIGVGPGAHGRISENGNKIATTTIENPENWLRGVELNGTS 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            ++ E ++   QA E+LMM LRL EG+ ++ ++ ++G  LD +        G I+ +  +
Sbjct: 305 TIDDEVINHIDQASEYLMMSLRLIEGVDMERYKKISGVALDNKLIDKNIENGLIKVINNN 364

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            L  TQRG  +L+++I +L +
Sbjct: 365 -LIATQRGRIILNTLIKDLLI 384


>gi|307730702|ref|YP_003907926.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
 gi|307585237|gb|ADN58635.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
          Length = 409

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 214/380 (56%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   + +++ +   +++    L   R + ++F 
Sbjct: 32  PLSLYVHFPWCVRKCPYCDFNSHEWKGETFPENDYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++ +A  A+ +A   F   + DL++ALP+QT+ + E +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSKQARQAVEVAATTFDNFNLDLMFALPQQTLAECEADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FEPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 268 AKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPATFIEQAKA-GAAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +S+     EF++  LRL EG  V  +    G  +       +  +R+  I R    
Sbjct: 327 EEHEVSARDLPFEFMLNALRLMEGFPVHRFIERTGLPMTSIEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           ++  T  G   L+ + A   
Sbjct: 386 KIAPTPLGQAFLNDLQALFL 405


>gi|313501077|gb|ADR62443.1| Coproporphyrinogen III oxidase [Pseudomonas putida BIRD-1]
          Length = 388

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 208/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L ++         R ISSIFFG
Sbjct: 15  PLALYIHIPWCVRKCPYCDFNSHAAGPELPEDAYVTALLDDLDQELAAVQGRPISSIFFG 74

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E + F+ YR+ G+NR+S+GV
Sbjct: 75  GGTPSLFSASALGRLLRGVEQRIPFAPDIEITLEANPGTFEQDKFKAYRQTGINRLSIGV 134

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 135 QSFQPAKLEALGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAID 194

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ + HG   YE+S +
Sbjct: 195 LGPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMAEHGYRQYEVSAY 250

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYWR+GD+IGIG GAH ++     R+      + P+ +L + +      
Sbjct: 251 AQAGRAAQHNLNYWRFGDFIGIGAGAHGKLTFADGRILRTWKTRLPKDYLNLAKPFR--- 307

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
             ++ L  ++   EFLM  LRL +G+  + +    G  L    E  R  +++G + +V+ 
Sbjct: 308 AGEKLLPVDELPFEFLMNALRLTDGVEAELFTQRTGLPLSQLQEARRAAEQKGLL-QVEP 366

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG   L+ ++    
Sbjct: 367 DRLVATPRGQLFLNDLLQYFL 387


>gi|254252977|ref|ZP_04946295.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
 gi|124895586|gb|EAY69466.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
          Length = 404

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 127/381 (33%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   + +++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPESDYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT  +   +++ ALS
Sbjct: 148 IQSFNEAHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQTFDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        +P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----AVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNRQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPAAFIEHAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL +G  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVDGFPVHSFIERTGLPMSTIEPALQEAERRGLIVR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  T  G   L+  +  L +
Sbjct: 382 RIAPTPLGQRFLND-LQELFL 401


>gi|171463500|ref|YP_001797613.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193038|gb|ACB43999.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 393

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/391 (34%), Positives = 216/391 (55%), Gaps = 10/391 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQ 60
           L++  N +T      L +Y+H+P+C KKCPYCDFNSH  +       +  +I++ + +++
Sbjct: 2   LNSNSNKVTLSALPPLALYIHFPWCEKKCPYCDFNSHQIKKDKSGFDEARYIKALIADLE 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                T  R + SIF GGGTPSL+  + +  +L  I     +    EIT+EANP SVE  
Sbjct: 62  TELPNTWGRQVHSIFIGGGTPSLLSAEGMDQLLCAIRARINLEPAAEITMEANPGSVEAE 121

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            F G+ +AG+NR+SLG+QS +++ L+ LGR HN  EA  AI +A   F  ++ DL+Y LP
Sbjct: 122 KFAGFAEAGINRVSLGIQSFQDEQLKALGRIHNGEEAKCAIQIALRHFKSVNLDLMYGLP 181

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+   + +++ ALS+   HLS Y LT+E  T F          LPSE+    +     
Sbjct: 182 NQTLELAKADIETALSFKTHHLSFYNLTLEPNTYFASFPP----KLPSEDEIDAIQEQNL 237

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G   YE+S ++    E  HNLNYWR+GDYIGIG GAH +V           E+ 
Sbjct: 238 DLLTKAGYQHYEVSAYAHKNQECKHNLNYWRFGDYIGIGAGAHGKVSYPDRITRQVRERQ 297

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--EC 358
           PE+++  +   G+A++E   ++++    EF++  LRL++G+    +    G  L++  + 
Sbjct: 298 PEAYMTAMESKGNALIENREIAAKDLPFEFMLNALRLKDGVDTSTFSERTGLPLNVISKG 357

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                ++G ++    +RL+ T  G+  L+++
Sbjct: 358 LGEASKKGLLDE-NPNRLKATAMGIRYLNNL 387


>gi|167903811|ref|ZP_02491016.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei NCTC
           13177]
          Length = 405

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 AFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G  V
Sbjct: 264 YAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTPV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +E   G +L          +++G +     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|327482669|gb|AEA85979.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri DSM 4166]
          Length = 392

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/398 (34%), Positives = 222/398 (55%), Gaps = 15/398 (3%)

Query: 4   LSAYENNMTGQGS---NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++A     TGQG      L  YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++
Sbjct: 2   IAASPAPATGQGRFELPPLAAYVHIPWCVRKCPYCDFNSHTAGPELPEEAYVAALLADLR 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              +    R +SSIFFGGGTPSL   + +A I++G+      + ++EIT+EANP + E  
Sbjct: 62  ADLEHVQGRRLSSIFFGGGTPSLFSARALAAIVEGLEHLVGFADDIEITLEANPGTFEQA 121

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
            F+ YR+ G++R+S+GVQS +   L+ LGR H+  EAI A  +AR   F   + DL++ L
Sbjct: 122 KFRDYRQLGIDRLSIGVQSFQAAKLKALGRIHDGDEAIRAADMARAAGFENFNLDLMHGL 181

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++     +L+ A++    HLS YQLT+E  TLF+         LP +++  D+    
Sbjct: 182 PDQSLEDALSDLRTAIAQQPTHLSWYQLTLEPNTLFWSQPP----QLPEDDILWDIQEAG 237

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE- 298
           Q++   HG   YE S ++  G ++ HNLNYW +GD++GIG GAH+++     R+  S + 
Sbjct: 238 QALLGEHGYRQYETSAYAQPGRQARHNLNYWTFGDFLGIGAGAHAKLSHADGRILRSWKT 297

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           + P+ +L            ++ L++++   EFLM  LRL +G+    +    G  LD   
Sbjct: 298 RLPKDYLD---PGKAFRAGEKQLTADELPFEFLMNVLRLTDGVPAVLFTQRTGLALDAIA 354

Query: 359 E--RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  RN + +G +     +RL  T +G   L+ ++ +  
Sbjct: 355 KPRRNAEARGLLSN-DPARLVATPKGQLFLNDLLQSFL 391


>gi|167586473|ref|ZP_02378861.1| coproporphyrinogen III oxidase [Burkholderia ubonensis Bu]
          Length = 404

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 215/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEHALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+A++A AA+ +A N F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNETHLKALGRIHDAAQARAAVEVAANTFDNFNLDLMFALPNQTLDECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYERYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPHHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLIAR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|227112388|ref|ZP_03826044.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 380

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/376 (35%), Positives = 213/376 (56%), Gaps = 16/376 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPDEAKRAAHLANGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  ++++++  EF M   RL E     D+    G    ++  + ++ L  QG++    
Sbjct: 297 DKQHDVANDERPFEFFMNRFRLLEAAPRADFTAYTGLEEHSIRPQLDQAL-AQGYLTETA 355

Query: 373 FSRLRCTQRGMTMLDS 388
            +  + T+ G   L+S
Sbjct: 356 -THWQITEHGKLFLNS 370


>gi|253689817|ref|YP_003019007.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756395|gb|ACT14471.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 380

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 134/377 (35%), Positives = 210/377 (55%), Gaps = 18/377 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + E+T+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEVTMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDPQKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERV 371
            ++  ++++ +  EF M   RL E     D+    G  L+  C R        QG++   
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPRADFTAYTG--LEEHCIRPQLDQALAQGYLTET 354

Query: 372 QFSRLRCTQRGMTMLDS 388
             +  + T+ G   L+S
Sbjct: 355 A-THWQITEHGKLFLNS 370


>gi|261822849|ref|YP_003260955.1| coproporphyrinogen III oxidase [Pectobacterium wasabiae WPP163]
 gi|261606862|gb|ACX89348.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           wasabiae WPP163]
          Length = 379

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 215/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLDADLPLASGRELHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQALLDGVRARIPLTPDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFDAQKLTRLGRIHGPDEAKRAAQLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D+Y    ++ SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----TLPDDDALWDIYEQGHALLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTVKVRHPRGYMQ-----GTYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  ++++ +  EF M   RL E     D+    G    ++  + ++ L  QG++    
Sbjct: 297 DKQHDVANDDRPFEFFMNRFRLLEAAPRADFTAYTGLEEHSIRSQLDQAL-AQGYLTETT 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + T+ G   L+S++  L +
Sbjct: 356 -THWQITEHGKLFLNSLL-ELFL 376


>gi|89067429|ref|ZP_01154942.1| coproporphyrinogen III oxidase [Oceanicola granulosus HTCC2516]
 gi|89046998|gb|EAR53052.1| coproporphyrinogen III oxidase [Oceanicola granulosus HTCC2516]
          Length = 369

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 182/372 (48%), Positives = 244/372 (65%), Gaps = 6/372 (1%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           HWPFC  KCPYCDFNSHV    + Q  + ++  +E+   R+ TGPR + S+FFGGGTPSL
Sbjct: 2   HWPFCQAKCPYCDFNSHVVSG-IDQTRWARALASEIARYREETGPRLLRSVFFGGGTPSL 60

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + P+ +  +L  + + W + ++ E+T+EANP+SVE   F+GYR AGVNR+SLGVQ+L + 
Sbjct: 61  MLPETVDTVLQAVRRAWPMVNDPEVTLEANPTSVEAGRFRGYRDAGVNRVSLGVQALNDA 120

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            LR LGR H+  EA AA  LAR++FPR+SFDLIYA   Q +  W  EL++AL+ AVDHLS
Sbjct: 121 DLRRLGRLHDMREARAAFELARDVFPRVSFDLIYARQDQELAAWRAELEQALTMAVDHLS 180

Query: 204 LYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           LYQLTIE+GT F   ++ G L  LP+E+ AVDL+ +TQ + +A G+  YE+SNH+   AE
Sbjct: 181 LYQLTIEEGTAFGDRYRAGKLAGLPNEDRAVDLWEVTQEVCAAAGMENYEVSNHARPEAE 240

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLS 322
           S HNL YWRYGDY+G+GPGAH R+ V   R+A    + P +WL  V   GH  V +E L 
Sbjct: 241 SRHNLVYWRYGDYVGVGPGAHGRITVDGRRIATEALRAPGAWLAQVEATGHGDVAREALD 300

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
           +E Q  E L+MG+RLREG+ +   E L     D+   R L   GF+E     RLR T  G
Sbjct: 301 AEAQLAEVLLMGMRLREGVDLARVEAL---GFDVAAARGLVDGGFVELT-GGRLRLTPAG 356

Query: 383 MTMLDSVIANLA 394
             +L+ V+  L 
Sbjct: 357 WPVLNGVLRELL 368


>gi|300723971|ref|YP_003713285.1| putative oxidase [Xenorhabdus nematophila ATCC 19061]
 gi|297630502|emb|CBJ91167.1| putative oxidase [Xenorhabdus nematophila ATCC 19061]
          Length = 376

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 211/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L +++    + G R +S IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLRADLPMIGDREVSMIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+  +  +S   EIT+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEGMQRLLDGVRDSLRLSPQAEITMEANPGTVEADRFNAYQQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP QT+ +   +L++A+ 
Sbjct: 126 QSFGSDKLIRLGRIHGPEEAKRAAKLADGLGLRSFNLDLMHGLPNQTLNEALNDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F         VLP ++   D+++    + +  G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTRFGSRPP----VLPDDDALWDIFSQGHQLLTEAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKISFEDGRILRTVKTKHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            +K  +  + +  EF M   RL E +  +D+    G     +  + +  L + G+I    
Sbjct: 297 DQKNQVDHDDRPFEFFMNRFRLLESMPRQDFSDFTGLPGSAIRPQLDEALAK-GYITEND 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + T+ G   L+S++  L +
Sbjct: 356 -THWQITKHGKLFLNSLL-ELFL 376


>gi|260767471|ref|ZP_05876408.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
 gi|260617583|gb|EEX42765.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
          Length = 390

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 205/389 (52%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  +  + +  +I + L +    ++  +    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKADIPETEYIDALLEDLDTDIERYQLTDDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L GI        ++EIT+EANP ++E   F GYR+ GV 
Sbjct: 64  HSIFIGGGTPSLISPDGIGRLLRGIEARIAFKPDIEITMEANPGTIEAERFAGYRQVGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT+ Q   +
Sbjct: 124 RISIGVQSFEPEKLTRLGRIHGRDEAVKAAQLAHQIGLNSFNLDLMHGLPDQTLEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  A  HLS YQLTIE  TLFY         LP ++   D++ L     +A G   
Sbjct: 184 LESAIELAPPHLSWYQLTIEPNTLFYFKPP----TLPDDDALWDIFELGHQKLTAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
                 ++ E L ++  +  EF M   RL E     D+    G  + +          Q 
Sbjct: 300 NLAKPYLDSEQLVADVDRPFEFFMNRFRLIEPCPKADFSATTGLPISVIQPTLDWAIEQE 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           F+   + +  + T++G   L+ ++     
Sbjct: 360 FLSETE-THWQITEKGKLFLNDLLEAFMA 387


>gi|53720178|ref|YP_109164.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei K96243]
 gi|53726004|ref|YP_103674.1| coproporphyrinogen III oxidase [Burkholderia mallei ATCC 23344]
 gi|67643941|ref|ZP_00442684.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|121598921|ref|YP_992154.1| coproporphyrinogen III oxidase [Burkholderia mallei SAVP1]
 gi|124383729|ref|YP_001028599.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10229]
 gi|126448733|ref|YP_001081502.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10247]
 gi|166998296|ref|ZP_02264156.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
 gi|167739727|ref|ZP_02412501.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 14]
 gi|167816930|ref|ZP_02448610.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 91]
 gi|167912077|ref|ZP_02499168.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 112]
 gi|254175530|ref|ZP_04882190.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei ATCC 10399]
 gi|254196044|ref|ZP_04902469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei S13]
 gi|254202372|ref|ZP_04908735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei FMH]
 gi|254207706|ref|ZP_04914056.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei JHU]
 gi|254356394|ref|ZP_04972670.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei 2002721280]
 gi|52210592|emb|CAH36575.1| putative coproporphyrinogen III oxidase family protein
           [Burkholderia pseudomallei K96243]
 gi|52429427|gb|AAU50020.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Burkholderia mallei ATCC 23344]
 gi|121227731|gb|ABM50249.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei SAVP1]
 gi|124291749|gb|ABN01018.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126241603|gb|ABO04696.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147746619|gb|EDK53696.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei FMH]
 gi|147751600|gb|EDK58667.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei JHU]
 gi|148025391|gb|EDK83545.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei 2002721280]
 gi|160696574|gb|EDP86544.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia mallei ATCC 10399]
 gi|169652788|gb|EDS85481.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei S13]
 gi|238525410|gb|EEP88838.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|243065371|gb|EES47557.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
          Length = 405

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 AFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++     S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G  V
Sbjct: 264 YAKPHRRSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTPV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +E   G +L          +++G +     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|46907704|ref|YP_014093.1| coproporphyrinogen III oxidase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093483|ref|ZP_00231246.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 4b H7858]
 gi|254824465|ref|ZP_05229466.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-194]
 gi|254932661|ref|ZP_05266020.1| coproporphyrinogen III oxidase [Listeria monocytogenes HPB2262]
 gi|254991904|ref|ZP_05274094.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J2-064]
 gi|46880973|gb|AAT04270.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018159|gb|EAL08929.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 4b H7858]
 gi|293584220|gb|EFF96252.1| coproporphyrinogen III oxidase [Listeria monocytogenes HPB2262]
 gi|293593702|gb|EFG01463.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-194]
 gi|332311918|gb|EGJ25013.1| Oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes str. Scott A]
          Length = 385

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 197/389 (50%), Gaps = 10/389 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N       S  VY+H PFC   C YCDFN      +   + ++   + EM+         
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIA 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  G
Sbjct: 62  PVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           VNRIS+GVQS   + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++
Sbjct: 122 VNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQ 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG 
Sbjct: 182 DTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGR 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +
Sbjct: 242 KQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPL 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
           +KN     +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +
Sbjct: 298 QKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAK 357

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++E  + + +  T+ G  + ++V     
Sbjct: 358 GWLENNEEN-VALTRSGRFLGNNVFQEFL 385


>gi|157372269|ref|YP_001480258.1| coproporphyrinogen III oxidase [Serratia proteamaculans 568]
 gi|157324033|gb|ABV43130.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Serratia proteamaculans 568]
          Length = 379

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 135/383 (35%), Positives = 211/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     L   R +S+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDADLPLVAGREVSTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V    EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQSLLDGVRARIHVVDGAEITMEANPGTVEADRFSGYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSAEKLTRLGRIHGPEEAKRAAHLATGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFERGHELLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTAKTKHPRGFMQ-----GKYM 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  +++  +  EF M   RL E     ++    G +   +    +  L + G++E   
Sbjct: 297 DKQHEVTTADRPFEFFMNRFRLLEAAPRAEFVNYTGLDESTIRAPLDEALAK-GYLEET- 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 355 PEYWQITEKGKLFLNSLL-ELFL 376


>gi|149192345|ref|ZP_01870550.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148833823|gb|EDL50855.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 389

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/387 (36%), Positives = 211/387 (54%), Gaps = 18/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++  + Q+ +I + L +    ++     +  R +
Sbjct: 9   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPQQAYITALLEDLDTDIRQYGLASDSRPL 68

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P+ I  +LDG+ +      ++EIT+EANP ++E   F+ YR  GV 
Sbjct: 69  HSIFIGGGTPSLIAPEYIKQLLDGVRERIPFRDDIEITMEANPGTIEAARFEQYRVVGVT 128

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS ++  L  LGR H  SEA+ A  LA  I     + DL++ LP+Q++     +
Sbjct: 129 RISIGVQSFQQTKLERLGRIHGESEAVNAAKLAHEIGLNSFNLDLMHGLPEQSIDDALSD 188

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+  A  HLS YQLTIE  TLFY         LP ++   D++     +    G   
Sbjct: 189 LKQAIELAPPHLSWYQLTIEPNTLFYSKPP----TLPDDDDLWDIFEQGHQMLVEAGYQQ 244

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L M++
Sbjct: 245 YEISGYSKPDFQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKVKHPRGYLNMLK 304

Query: 310 KNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
                 ++ E  +  + +  EF +   RL E      + +  G NLDI  E  +    QG
Sbjct: 305 ----PYLDSETNVDMKDRPFEFFINRFRLLEPCPKVQFTLRTGLNLDIIQEPIKRCLEQG 360

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
           +IE  +      T++G   L+ V+   
Sbjct: 361 YIEETE-EHWIVTEKGKLFLNDVLEQF 386


>gi|271501909|ref|YP_003334935.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
 gi|270345464|gb|ACZ78229.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
          Length = 379

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     +   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLPMAVARPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+    ++  + EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLSLVPDAEITMEANPGTVEADRFSGYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A++
Sbjct: 126 QSFSPDKLTRLGRIHGPEEAKRAAVLAAGLGLRSFNLDLMHGLPEQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         +LP ++   D++     + S  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----MLPDDDALWDIFEQGHRLLSNAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYQCRHNLNYWRFGDYLGIGCGAHGKITFTDGEIVRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
            ++  ++   +  EF M   RL E     D+    G +  +  E+      QG++   + 
Sbjct: 297 QQRSEVALADRPFEFFMNRFRLLEPAPRADFTAYTGLSESVIREQLDAALTQGYLTETE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QHWQVTEHGKLFLNSLL-ELFL 376


>gi|322834243|ref|YP_004214270.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
 gi|321169444|gb|ADW75143.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
          Length = 378

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 218/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     L G RS+ +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLHLVGGRSVGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     + +N EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSSEAMQNLLDGVRARLPLDANAEITMEANPGTVEADRFSGYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H   EA  A HLA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFDAQKLERLGRIHGPDEATRAAHLATGLNLRSFNLDLMHGLPDQTLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T++          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTMYASRPP----TLPDDDALWDIFEQGDQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTQPDGQILRTVKTKHPRGYMQ-----GRYM 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  + +E    EF M   RL E    +++ +  G +   +  + +  + ++  +E   
Sbjct: 297 DKQHPVETEDLPFEFFMNRFRLLEAAPREEFGLYTGLDESVIRAQLDEAITKEYLVETA- 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + T +G   L+S++  L +
Sbjct: 356 -THWQITGKGKLFLNSLL-ELFL 376


>gi|289668017|ref|ZP_06489092.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 385

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 215/390 (55%), Gaps = 11/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E+++ +   ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEDYVDALTRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  P+ I   L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+TQ E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLTQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQRLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+++L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQTYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQ 365
                  +   E +  E+   E+++  LRL EG  + D+E   G    +          Q
Sbjct: 298 AGTAAS-IGGDEIVPRERLPFEYMLNLLRLHEGFRLSDFEASTGLAASVIAVPLARALAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++ R Q  R+  T+ G    + V+  L +
Sbjct: 357 GWMTR-QGERVVPTELGRRFTNDVV-ELFL 384


>gi|76808674|ref|YP_334428.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1710b]
 gi|126453675|ref|YP_001067260.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1106a]
 gi|167825333|ref|ZP_02456804.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 9]
 gi|167846835|ref|ZP_02472343.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei B7210]
 gi|167895427|ref|ZP_02482829.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 7894]
 gi|167920051|ref|ZP_02507142.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei BCC215]
 gi|226193887|ref|ZP_03789489.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pakistan 9]
 gi|242315904|ref|ZP_04814920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1106b]
 gi|254191872|ref|ZP_04898375.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254258471|ref|ZP_04949525.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1710a]
 gi|76578127|gb|ABA47602.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1710b]
 gi|126227317|gb|ABN90857.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1106a]
 gi|157939543|gb|EDO95213.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|225934192|gb|EEH30177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei Pakistan 9]
 gi|242139143|gb|EES25545.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1106b]
 gi|254217160|gb|EET06544.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 1710a]
          Length = 405

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 AFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G  V
Sbjct: 264 YTKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTPV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +E   G +L          +++G +     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRGLLVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|289662150|ref|ZP_06483731.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 385

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 140/390 (35%), Positives = 215/390 (55%), Gaps = 11/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E+++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEDYVDALIRDLDADLPLAWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  P+ I   L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQRLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+++L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQTYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQ 365
                  +   E +  E+   E+++  LRL EG  + D+E   G    +          Q
Sbjct: 298 AGTAAS-IGGDEIVPRERLPFEYMLNLLRLHEGFRLSDFEASTGLAASVIAVPLARALAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++ R Q  R+  T+ G    + V+  L +
Sbjct: 357 GWMTR-QGERVVPTELGRRFTNDVV-ELFL 384


>gi|299066244|emb|CBJ37428.1| Coproporphyrinogen dehydrogenase [Ralstonia solanacearum CMR15]
          Length = 424

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 218/387 (56%), Gaps = 12/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + ++ F+ +   +++    +   R + +
Sbjct: 40  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPDQGIPEDRFLAAIRQDLEAALPMVWGRRVHT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  + +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 100 IFIGGGTPSLLSARGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 160 SIGIQSFNDAHLQALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 220 ALSFGTSHVSLYHLTLEPNTYFAKHPP----ALPDDDTAFAMQDWIHARLAAAGYEHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     KHPE++L+     G 
Sbjct: 276 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVIREMRHKHPETYLRQSETAGG 335

Query: 314 A--VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
           A  V E+  + +     EF++  LRL EG  V  ++   G  L    ER L   +R+G +
Sbjct: 336 ATVVQEQREVDAADLPFEFMLNTLRLTEGFPVTLFQERTGLPLR-GIERELDAAERRGLL 394

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     +R T+ G   L+ + A    
Sbjct: 395 VR-DHVAIRPTELGQRFLNDLQALFLA 420


>gi|294679005|ref|YP_003579620.1| oxygen-independent coproporphyrinogen-III oxidase [Rhodobacter
           capsulatus SB 1003]
 gi|294477825|gb|ADE87213.1| oxygen-independent coproporphyrinogen-III oxidase-3 [Rhodobacter
           capsulatus SB 1003]
          Length = 385

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 175/380 (46%), Positives = 246/380 (64%), Gaps = 3/380 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHV    +  + +++++L E+  +   T  R ++++F
Sbjct: 7   HGGFGLYLHWPFCAAKCPYCDFNSHVAAA-IDHDRWLRAYLAEIDRIGAETQGRVLNTVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A ++D I   W  ++++EIT+EANP+S++   F+ + + GV R+S+
Sbjct: 66  FGGGTPSLMAPETVAAVIDRIRATWPTANDLEITLEANPTSIDAGKFRAFAQGGVTRLSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++++ SLR LGR H+A+E  AA  +AR  FPR+SFDLIYA   Q +  W  EL+ AL
Sbjct: 126 GMQAMDDDSLRRLGRMHSAAEGRAAFDIARAHFPRVSFDLIYARQGQGLDDWARELRGAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S AVDH SLYQLTIE GT F ++   G L  LP +++A D+Y  TQ I  A GL AYE+S
Sbjct: 186 SMAVDHFSLYQLTIEDGTAFGRLFAAGKLRDLPEDDLAADMYLKTQEICDAAGLPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAE  HNL YWRYGDY GIGPGAH R+ +G  R A    K P  WL  V + G+ 
Sbjct: 246 NHARPGAECRHNLVYWRYGDYAGIGPGAHGRLTLGGVRHATEAPKAPADWLDRVERLGNG 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            + +E L  ++QA EFL+ GLRL EGI    +E L+G+ L      +L+  G I R    
Sbjct: 306 EMPREPLERQEQATEFLLFGLRLAEGIDPTRYERLSGQALPALALADLEAMGMIAR-DAG 364

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+R T +G  +L++VI  L 
Sbjct: 365 RIRATAQGRAVLNAVIRALM 384


>gi|188990326|ref|YP_001902336.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732086|emb|CAP50278.1| putative coproporphyrinogen dehydrogenase [Xanthomonas campestris
           pv. campestris]
          Length = 385

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/390 (36%), Positives = 217/390 (55%), Gaps = 11/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  ++++ + + ++     L   R 
Sbjct: 1   MPDLIPPPLALYVHLPWCVRKCPYCDFNSHAAKGALPFDDYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  P+ I   L   A     + N+EIT+E NP + E   F GYR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFDGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQS ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQSFDDAALQRLGRIHDSAEAERAIKLAQDAGCDNFNIDLMYALPEQTLAQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +A G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPQ---GIPDDDDAWDMQEHCQRLLAAAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G+ +  +     KHP+S+L  
Sbjct: 238 QYEVSAYARPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEQQVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQ 365
                 A+   E + + +   E+++  LRL EG  + D+E   G    +          Q
Sbjct: 298 AGSTA-AIGGDEHVPAARLPFEYMLNLLRLHEGFRLSDFEACTGLPAQVLQAPLARAMAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++   Q  R+  T+ G    + V+  L +
Sbjct: 357 GWLVE-QHGRIVPTELGRRFTNDVV-ELFL 384


>gi|171315532|ref|ZP_02904768.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
 gi|171099369|gb|EDT44107.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
          Length = 404

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP Q++ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAKTFDNFNLDLMFALPNQSLDECRTDIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  T+F K        +P ++ + D+       T+  G   YE+S +
Sbjct: 208 FAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFVERTGLPIGTIEPALKEAERRGLITR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|325265917|ref|ZP_08132603.1| putative coproporphyrinogen dehydrogenase [Kingella denitrificans
           ATCC 33394]
 gi|324982555|gb|EGC18181.1| putative coproporphyrinogen dehydrogenase [Kingella denitrificans
           ATCC 33394]
          Length = 405

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 136/381 (35%), Positives = 212/381 (55%), Gaps = 8/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+C++KCPYCDFNSH  +  + ++ ++Q+ LT++Q        R I +IF G
Sbjct: 11  PLSLYVHIPWCLQKCPYCDFNSHTIKTTLDEDAYVQALLTDLQHELPHFWGRGIETIFIG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+     I  +L GI     ++   EIT+EANP + + + FQG+R AG+NR+S+GV
Sbjct: 71  GGTPSVFSVSAIDRLLSGIRALVKLNPEAEITLEANPGTFDHDKFQGFRSAGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ L  LGR H+A EA  AI  A  IF R++ DL+YALP+Q       ++Q ALS+
Sbjct: 131 QSFDDRKLAALGRIHSADEARTAIEKACRIFERVNIDLMYALPQQNAADALADVQAALSF 190

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S YQLT+E  T F          LP ++ A D+ +   S     G   YE S  +
Sbjct: 191 GVQHISAYQLTLEPNTPFGHTPPK---GLPEDDTAQDIEDTVHSALQHAGFERYETSAFA 247

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               + + HNLNYW++GDYIGIG GAH ++           ++HPE++L  ++ N  A +
Sbjct: 248 RTPESRARHNLNYWQFGDYIGIGAGAHGKISHHDRIERTVRKRHPEAYLAAMQGNVQAAI 307

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           + + ++      EF+M  LRL  G+    +    G +L          +++G ++    +
Sbjct: 308 DHKTVAPNDLPFEFMMNALRLTGGVPAALFAERTGISLAQIEPVLAKARQKGLLDH-APN 366

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T+ G   L+ ++  L +
Sbjct: 367 VLRPTELGRRFLNDLL-ELFL 386


>gi|239995547|ref|ZP_04716071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas macleodii ATCC 27126]
          Length = 379

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 210/382 (54%), Gaps = 14/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+H P+CV+KCPYCDFNSH  +  + ++ ++   L ++    +    R + +IF
Sbjct: 3   NPPLSLYIHIPWCVQKCPYCDFNSHGLKSDLPEKEYVAHLLDDLAIDAKRIADRPVETIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL   + +A IL G+ +   +S   EIT+EANP +VE   F G+ +AG+NRIS+
Sbjct: 63  IGGGTPSLFSSEAMADILKGVKQRVNLSDTAEITMEANPGTVEAGKFAGFYQAGINRISV 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS + + L+ LGR HN S+A  A+  A +   P  + DL++ LP+Q++     +L++ 
Sbjct: 123 GIQSFQPKHLKVLGRIHNESQAENAVKQAHSAGLPTFNLDLMHGLPEQSVENAMGDLKQG 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +     HLS YQLTIE  T FY         LP +++  ++     S+    G H YEIS
Sbjct: 183 IELDPYHLSWYQLTIEPNTPFYSKPP----ELPDDDILWEIQEKGHSLLERAGYHQYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI--EKHPESWLKMVRKNG 312
            ++  G +  HNLNYWR+GDY+GIG GAH ++   ++         KHP  +++M   + 
Sbjct: 239 GYAKAGHQCRHNLNYWRFGDYLGIGCGAHGKITDAANGTIHRTVKVKHPRGYMEM---SR 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIE 369
             +  +  +S++    EF M   RL E   + D+    G  L  + +R L     QG + 
Sbjct: 296 PYLDTQTLVSADDLPFEFFMNRFRLVEPCPMSDFSDFTGTELTDDVKRALSDAHHQGLLS 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIA 391
            +  S  + T +G   L+S+++
Sbjct: 356 -ISDSHWQVTAKGRRYLNSLLS 376


>gi|163732968|ref|ZP_02140412.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
 gi|161393503|gb|EDQ17828.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
          Length = 385

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 176/380 (46%), Positives = 242/380 (63%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWP+C  KCPYCDFNSHV R ++ Q  +  ++L E++     T  R + S+F
Sbjct: 7   NGGFGLYIHWPYCEAKCPYCDFNSHVVR-QIDQAAWRDAYLVELRRAAAETRGRVLRSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  +A ++  I   W V++++EIT+EANPSSVE   F  +R+ G+ RIS+
Sbjct: 66  FGGGTPSLMDPDTVADVIREIRALWPVANDLEITLEANPSSVEAGRFAAFREGGITRISM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H   EA  A  +AR+ F R+SFDLIYA   Q++  WE EL++AL
Sbjct: 126 GIQALNDDDLRRLGRIHTVKEAQTAFDIARSTFERVSFDLIYARQGQSLQAWEQELKQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             AVDHLSLYQLTIE+GT F   +  G L  LP E+++ DLY LTQ +  + G+  YE+S
Sbjct: 186 DMAVDHLSLYQLTIEQGTAFGDRYNAGKLRDLPDEDLSADLYTLTQDLCGSAGMPGYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GA+S HNL YWRYGDY+GIGPGAH R+     R A     +P  WL  V     A
Sbjct: 246 NHARDGAQSRHNLIYWRYGDYLGIGPGAHGRLTANRQRWATECHSNPNRWLNSV-TGKDA 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L+S+ QA EFL+MGLRL+EGI    +E L+G+ LD     +L   G I   +  
Sbjct: 305 EKPRAALTSQDQASEFLLMGLRLKEGIDKNRYETLSGKPLDANAISDLVNLGMISDSEN- 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL    +G  +L++VI+ L 
Sbjct: 364 RLVVLDQGFIVLNAVISRLL 383


>gi|134095309|ref|YP_001100384.1| coproporphyrinogen III oxidase [Herminiimonas arsenicoxydans]
 gi|133739212|emb|CAL62261.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Herminiimonas arsenicoxydans]
          Length = 414

 Score =  375 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 133/389 (34%), Positives = 219/389 (56%), Gaps = 10/389 (2%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL     N+T      L +YVH+P+CVKKCPYCDFNSH       ++ ++ +   +++  
Sbjct: 27  YLQPGALNLTALP--PLSLYVHFPWCVKKCPYCDFNSHEATGGFPEDEYLSALRADLEQA 84

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L   R I +IF GGGTPSL+  + +  +L  I     +   VEIT+EANP + E   F
Sbjct: 85  LPLIWGRKIYTIFIGGGTPSLLSAKGLDRLLSDIRTLLPLDGAVEITMEANPGTFEAEKF 144

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           + YR +GVNR+S+G+QS   + L+ LGR H+  EA  A+ +A   F   + DL+YALP Q
Sbjct: 145 KSYRSSGVNRLSIGIQSFNARHLQALGRIHDGDEARRAVDIAMANFENFNLDLMYALPSQ 204

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+ +   ++Q A+++A  HLSLY LT+E  T+F K       V+P ++ + D+ ++    
Sbjct: 205 TLEEARQDVQTAIAFAPPHLSLYHLTMEPNTVFAKYPP----VVPDDDASADMQDMIAEE 260

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           T+A G   YE+S ++    ++ HNLNYW++GDY+GIG GAH+++      +  +  K P+
Sbjct: 261 TTAAGYQHYEVSAYAQPKRQARHNLNYWQFGDYLGIGAGAHTKLSFPHRVIRQARYKQPK 320

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECER 360
           S+++ +R  G+ + E+  +S  +   EF++  +RL  G+ V  +    G  L+      R
Sbjct: 321 SYMEQMRL-GNPIQEETEISRSELGFEFMLNAMRLTNGVEVNLFADRTGMPLNAIERALR 379

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             + +G + R     ++ T+ G   L+ +
Sbjct: 380 AAEDKGLLYR-DHKTIKPTELGQRFLNDL 407


>gi|313668861|ref|YP_004049145.1| porphyrin oxidoreductase [Neisseria lactamica ST-640]
 gi|313006323|emb|CBN87786.1| putative porphyrin oxidoreductase [Neisseria lactamica 020-06]
          Length = 391

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 206/387 (53%), Gaps = 6/387 (1%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ N         L +Y+H P+C+KKCPYCDFNSH  +  + +  +I + LT++Q     
Sbjct: 5   SFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNGLPEAAYIDALLTDLQLELPN 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + +IFFGGGTPSL + ++I  +L G+     +    EIT+EANP + E+  FQG+
Sbjct: 65  IWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQPEAEITLEANPGTFEIEKFQGF 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           + AG+ R+S+GVQS  +  L  LGR HN  EA+ AI  A  +F +++ DL+YALP QT+ 
Sbjct: 125 KDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAIATALKLFDKVNIDLMYALPNQTVR 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               ++Q A++    H+S Y LT+E  T F          LP +  A+D+ +        
Sbjct: 185 TALDDVQTAIATGATHISAYHLTMEPNTPFGHTPPK---GLPQDEAALDIEDAVHGALEN 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE S  +    +  HNLNYW++GDY+GIG GAH ++            +HP  +L
Sbjct: 242 AGFIHYETSAFAQNNKQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYL 301

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQ 363
            +++      VE++ +++E    EF+M  LRL +G+     +   G      +      +
Sbjct: 302 ALMQNRPGEAVERKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETAR 361

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++G +E    +  R T+RG   L+ ++
Sbjct: 362 QKGLLE-TNPAVFRPTERGRLFLNDLL 387


>gi|120612224|ref|YP_971902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax citrulli AAC00-1]
 gi|120590688|gb|ABM34128.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax citrulli AAC00-1]
          Length = 390

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/386 (35%), Positives = 219/386 (56%), Gaps = 12/386 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSI 71
               L +YVH P+C+KKCPYCDFNSH  R   G   ++ ++ + + +++    L   R++
Sbjct: 10  APPPLSLYVHLPWCLKKCPYCDFNSHEARGGAGALQEQRYLDALMADLEAALPLVWGRTV 69

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+F GGGTPSL  PQ I  ++ G+     + ++ EIT+EANP + E + F+ YR AGV 
Sbjct: 70  HSVFIGGGTPSLFSPQAIDQLIGGVRARLRLEADAEITLEANPGTFEKDRFRAYRAAGVT 129

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S+GVQS +++ L+ LGR H+ ++A+AA+  A   F   + D++YALP Q++   E ++
Sbjct: 130 RLSVGVQSFDDRFLQALGRVHDRAQALAAVQEAAQAFDTFNLDIMYALPGQSLEDLERDV 189

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             ALS    HLS+Y LTIE  T F +       V+P +++A  + +   ++T A GL  Y
Sbjct: 190 ALALSLQPPHLSIYHLTIEPNTYFARFPP----VVPEDDLAYAMLDRITAMTEAAGLRRY 245

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EIS +S  G + +HN NYW++GDY+GIG GAH ++      V     + P+ +++     
Sbjct: 246 EISAYSRPGHQCVHNTNYWQFGDYLGIGAGAHGKLSFAHRVVRQVRFRDPQRYMEQALA- 304

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
           G+AV +   +       EF++  LRLREG +++D+    G  L           R+G I 
Sbjct: 305 GNAVAQDHEVRRADLPFEFMLNALRLREGFALQDFMDRTGLPLSAIAGALDEAGRKGLIV 364

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
           R   +R+R T+RG   L   +  L +
Sbjct: 365 R-DAARVRPTERGFDFLSD-LQELFL 388


>gi|17546880|ref|NP_520282.1| coproporphyrinogen III oxidase [Ralstonia solanacearum GMI1000]
 gi|17429180|emb|CAD15868.1| putative cog0635, coproporphyrinogen III oxidase and related fe-s
           oxidoreductases oxidoreductase protein [Ralstonia
           solanacearum GMI1000]
          Length = 424

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/387 (35%), Positives = 217/387 (56%), Gaps = 12/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH      + ++ F+ +   +++    +   R + +
Sbjct: 40  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEAGIPEDRFLAAIRQDLEAALPMVWGRRVHT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  + +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 100 IFIGGGTPSLLSARGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 160 SIGIQSFNDTHLQALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 220 ALSFGTSHVSLYHLTLEPNTYFAKHPP----ALPDDDTAFAMQDWIHARLAAAGYEHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     KHPE++L+     G 
Sbjct: 276 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVIRDMRHKHPETYLRQAETAGG 335

Query: 314 A--VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
           A  V E+  + +     EF++  LRL +G  V  ++   G  L    ER L   +R+G +
Sbjct: 336 ATVVQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLR-GIERELDAAERRGLL 394

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
                + +R T+ G   L+ + A    
Sbjct: 395 VH-DHATIRPTELGQRFLNDLQALFLA 420


>gi|325922289|ref|ZP_08184070.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas gardneri
           ATCC 19865]
 gi|325547242|gb|EGD18315.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas gardneri
           ATCC 19865]
          Length = 385

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/390 (35%), Positives = 213/390 (54%), Gaps = 11/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M+      L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MSDLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDNDLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  PQ I   L   A     + N+EIT+E NP + E   F GY  AGV
Sbjct: 61  VHSVFFGGGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFDGYLAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLAQAER 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    H+S YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPTHMSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQRLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+S+L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEQHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQ 365
              N  ++   E +   +   E+++  LRL EG  + D+E   G               Q
Sbjct: 298 -AGNAASIGGDEVVPRARLPFEYMLNVLRLHEGFRLSDFEASTGLEASEIAAPLARAVAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++   Q  R+  T+ G    + V+  L +
Sbjct: 357 GWMTE-QDGRVIPTELGRRFTNDVV-ELFL 384


>gi|58580763|ref|YP_199779.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84622694|ref|YP_450066.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578266|ref|YP_001915195.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58425357|gb|AAW74394.1| oxidoreductase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84366634|dbj|BAE67792.1| oxidoreductase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188522718|gb|ACD60663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 385

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/391 (35%), Positives = 217/391 (55%), Gaps = 13/391 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  P  I   L   +     + N+E+T+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPDAIDRFLQAASARLRFAPNLEMTLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H++++A  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSADAERAIKLAQDAGYDNFNIDLMYALPEQTLLQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQRLLANAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+S+L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQR 364
                  +   E +  E+   E+++  LRL EG  + D+E   G     +++   R L  
Sbjct: 298 AGTAAS-IGGDEIVPRERLPFEYMLNLLRLHEGFRLSDFEASTGLAASVIEVPLARAL-A 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG++ R Q  R+  T+ G    + V+  L +
Sbjct: 356 QGWMTR-QDGRVVPTELGRRFTNDVV-ELFL 384


>gi|209519148|ref|ZP_03267953.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
 gi|209500448|gb|EEA00499.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
          Length = 409

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/380 (34%), Positives = 212/380 (55%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   + +++++   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGETFPEGDYLEALRADLEMALPLIWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E + F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDSMLSDIRALLPLDADAEITLEANPGTFEADKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+A++A  A+ +A   F   + DL++ALP QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDAAQARHAVEVAATTFDNFNLDLMFALPGQTLAECQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     T+  G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHQRTAEAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  V  +  KHP ++++  R     V 
Sbjct: 268 ARPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRIVRQARYKHPTTFIEQARAGAS-VQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G ++          +R+  I R    
Sbjct: 327 EEHEVGPRDLPFEFMLNALRLVEGFPVHRFIERTGLSITTIEAALEEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G   L+ + A   
Sbjct: 386 RIAPTPLGQAFLNDLQALFL 405


>gi|54310246|ref|YP_131266.1| coproporphyrinogen III oxidase [Photobacterium profundum SS9]
 gi|46914687|emb|CAG21464.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Photobacterium profundum SS9]
          Length = 384

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/389 (35%), Positives = 211/389 (54%), Gaps = 20/389 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ----LTGPRSI 71
              L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + L ++           G R +
Sbjct: 4   PPPLSLYVHIPWCVQKCPYCDFNSHALKAEIPELDYIDALLEDLDIDLAKYQLEAGVRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L GI      S ++EIT+EANP +VE   F  Y++ G+N
Sbjct: 64  HSIFIGGGTPSLISPPEIGRLLKGIETRIPFSHDIEITMEANPGTVEAGRFVAYQEVGIN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS +++ L  LGR H + EA  A  LA +      + DL++ LP Q++     +
Sbjct: 124 RISIGVQSFQDEKLTRLGRIHGSDEARKAAKLATDAGLNSFNIDLMHGLPDQSIDDAMYD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+S    HLS YQLTIE  T+FY         LP ++   D++     I +A G   
Sbjct: 184 LKQAISLNPPHLSWYQLTIEPNTMFYSKPP----TLPDDDDLWDIFEQGHQILAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH +V      +  +++ KHP  +L   +
Sbjct: 240 YEISGYSKPGLQCRHNLNYWRFGDYLGIGCGAHGKVSFADGNITRTVKVKHPRGYLNPAK 299

Query: 310 KNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQ 365
                 ++KE  + + ++  EF M   RL E    +D+    G +LD      +  L+++
Sbjct: 300 ----PYLDKETQVDAAERPFEFFMNRFRLLEACPKQDYCDRTGLSLDTIDTNIQWALEQK 355

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             I+       + T+ G   L+ ++A   
Sbjct: 356 YLIDT--GDTWQITEHGKLFLNDLLAAFV 382


>gi|134295023|ref|YP_001118758.1| coproporphyrinogen III oxidase [Burkholderia vietnamiensis G4]
 gi|134138180|gb|ABO53923.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia vietnamiensis G4]
          Length = 404

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + ++F 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNEGHLKALGRIHDTAQARAAVEIAAQTFDNFNLDLMFALPNQTLAECRADIETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K       V+P ++ + D+       T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHERTAEAGYGRYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G  +          +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMGTIEPALNEAERRGLITR-DFT 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|260576114|ref|ZP_05844107.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
 gi|259021594|gb|EEW24897.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
          Length = 385

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 173/381 (45%), Positives = 243/381 (63%), Gaps = 3/381 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHV   ++ Q+ + +++L+E+  +   T  R ++S++
Sbjct: 6   NGGFGLYLHWPFCQSKCPYCDFNSHVST-RIDQDRWQRAYLSEISRVGAETQGRLLNSVY 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ ++ IL  +   WT++++ EIT+EANP SVE   F+GYR AGVNR+S+
Sbjct: 65  FGGGTPSLMRPELVSAILARVRATWTLANDCEITLEANPGSVEAGRFRGYRDAGVNRVSM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H+ +EA AA  +AR  F R+SFDLIYA   QT+  W+ EL  AL
Sbjct: 125 GIQALADGDLRALGRAHSVAEARAAFDVARTTFDRVSFDLIYARQNQTLKNWQKELSDAL 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + A DH+SLYQLT+E GT F      G L  LP E ++ D Y  TQ I  A G+ AYE+S
Sbjct: 185 TMAADHISLYQLTVEDGTAFGDRLAHGKLRGLPGEELSADFYAATQEICGAAGMDAYEVS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  G+ES HNL YWR GDY+GIGPGAH R+     R A    + P +WL  V   G+ 
Sbjct: 245 NHAKTGSESRHNLIYWRAGDYVGIGPGAHGRLSQNDDRWATEGLRAPGAWLSKVESEGNG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +E L    +A E+LMM LRLREG+S+  +   AG  +  +   +L   G I  V  +
Sbjct: 305 EALREILRPADRAAEYLMMSLRLREGMSLPRYSSFAGDRISPQKLADLVEIGMIS-VATN 363

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++R T  G  +L+++IA L+ 
Sbjct: 364 QIRATDAGRMVLNTLIAELSA 384


>gi|241767031|ref|ZP_04764816.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
 gi|241362434|gb|EER58378.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
          Length = 418

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/384 (35%), Positives = 218/384 (56%), Gaps = 13/384 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR-----YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +YVH P+C+KKCPYCDFNSH  R      ++ +  ++ + + +++    L   RS+ 
Sbjct: 39  PLALYVHLPWCLKKCPYCDFNSHEWRSAGGAQELPEARYLDALVADLEAALPLVWGRSVH 98

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL  PQ+I  ++  I     ++++ EIT+EANP + E + F+ +R AGV R
Sbjct: 99  SIFIGGGTPSLFSPQSIDRLIGDIRARLPLAADCEITLEANPGTFEKDRFRAFRAAGVTR 158

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+GVQS  ++ L+ LGR H+ ++A+AA+  A + F   + D++YALP QT+ + E ++ 
Sbjct: 159 LSVGVQSFNDRHLQALGRVHDRAQALAAVQEAASAFDTFNLDIMYALPGQTLQELEQDMA 218

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL+ A  HLS+Y LTIE  T F K        +P ++ A  + +    +T   GL  YE
Sbjct: 219 TALALAPPHLSVYHLTIEPNTYFAKYPP----AIPEDDQAYAMLDRITEMTGQAGLARYE 274

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS ++  G    HN NYW++GDY+G+G GAHS++      V  +  + P  ++      G
Sbjct: 275 ISAYARPGHACFHNTNYWQFGDYLGLGAGAHSKLSFAHRVVRQARFRDPRLYMDNALA-G 333

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIER 370
            AV   E +       EF++  LRLREG +++D+    G++L          +R+G I R
Sbjct: 334 RAVALDEDVRRADLPFEFMLNALRLREGFALQDFVERTGQSLTAIAGALDEAERKGLITR 393

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               R+R T+RG+  L+ + A   
Sbjct: 394 -DLGRVRPTERGVDFLNDLQALFL 416


>gi|332284448|ref|YP_004416359.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
 gi|330428401|gb|AEC19735.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
          Length = 416

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 213/380 (56%), Gaps = 8/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +++++ +   +++    L   R + SIF G
Sbjct: 41  PLSLYVHVPWCVRKCPYCDFNSHELGAELPEQDYLTALQADLEQALPLIWGRQVVSIFIG 100

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  +L        +  + EIT+EANP +VE   F  Y  +GVNRISLG+
Sbjct: 101 GGTPSLLSGQALDQMLAMFRACLNLLPDAEITLEANPGTVEAGRFADYAASGVNRISLGI 160

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS + ++L  LGR H+A +A AA+ +A+ +  R++ D++YALP Q++     +L +A+S+
Sbjct: 161 QSFDNRALEALGRIHDAEQARAAVEIAQKVVDRVNLDIMYALPGQSIDDCAQDLHQAMSF 220

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLSLY LT+E  T+F K        +P ++ +  + +L    T+A G   YE+S ++
Sbjct: 221 QTGHLSLYHLTLEPNTVFAKYPP----TVPDDDTSAAMQDLIADATAAGGWERYEVSAYA 276

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRKNGHAVV 316
             G    HNLNYW +GDY+GIGPGAH ++      V  +  K+P SW+ K + ++G  + 
Sbjct: 277 RSGQRCRHNLNYWEFGDYLGIGPGAHGKLSFHDKIVRQAKLKNPSSWMKKAMLRDGSHLA 336

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E   +  +    EF++  LRL+ G+    +    G+++            +G +E     
Sbjct: 337 EDRQVDWKDLGFEFMLNVLRLKHGVPRSSYIERTGQSILAIAPALERAVARGLLEPG-HE 395

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL+ T+ G   L+ + A   
Sbjct: 396 RLQATEHGWQFLNDLQAEFL 415


>gi|28899396|ref|NP_799001.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366267|ref|ZP_05778726.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus K5030]
 gi|260878916|ref|ZP_05891271.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AN-5034]
 gi|260898283|ref|ZP_05906779.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus Peru-466]
 gi|260902388|ref|ZP_05910783.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ4037]
 gi|28807632|dbj|BAC60885.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085845|gb|EFO35540.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus Peru-466]
 gi|308090492|gb|EFO40187.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AN-5034]
 gi|308107145|gb|EFO44685.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ4037]
 gi|308113531|gb|EFO51071.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus K5030]
          Length = 392

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    +   R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYISALLEDLDTDIDKYRLNDAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI        ++EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPDIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQEKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E L + E +  EF M   RL E    +D+    G  L    +        G
Sbjct: 300 NMVKPYLHTEQLVADEDRPFEFFMNRFRLMEACPKQDYVDTTGLPLSTIQDTIDWALEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   + +  + T++G   L+ ++     
Sbjct: 360 YLSETE-THWQITEKGKLFLNDLLEAFMA 387


>gi|121611071|ref|YP_998878.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verminephrobacter eiseniae EF01-2]
 gi|121555711|gb|ABM59860.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verminephrobacter eiseniae EF01-2]
          Length = 416

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/382 (35%), Positives = 211/382 (55%), Gaps = 16/382 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR--------YKVGQENFIQSFLTEMQWMRQLTGPR 69
            L +YVH P+C++KCPYCDFNSH  R          + ++ ++ + + +++    L   R
Sbjct: 31  PLSLYVHLPWCLRKCPYCDFNSHALRAGNAGSAAEPLPEQRYLAALMADLEAALPLVWGR 90

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+F GGGTPSL  P  I  ++  I     +    EIT+EANP S E   F+ +R AG
Sbjct: 91  MVRSVFIGGGTPSLFSPAAIDQLIGAIRARLPLVPACEITLEANPGSFEKERFRAFRAAG 150

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V R+S+GVQS  ++ L  LGR H+ ++A+AA+  A   F   + D++YALP QT+ + E 
Sbjct: 151 VTRLSVGVQSFADRHLAALGRVHDRAQALAAVQEAAQAFETFNLDIMYALPGQTLQELEQ 210

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++AL+    H+S+YQLTIE  T F K        LP +++A  + +    +T   GL 
Sbjct: 211 DLRQALALEPPHISVYQLTIEPNTRFAKFPP----ALPEDDLAYAMLDRITQLTGQAGLA 266

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEIS ++  G +  HN NYW++GDY+GIG GAHS++      V     + P  +++   
Sbjct: 267 RYEISAYARPGQQCAHNTNYWQFGDYLGIGAGAHSKLSFAHRVVRQVRLREPGRYMEQAL 326

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGF 367
             G A+ + E +       EF++  LRL +G + +D+    G  L    E   + +RQG 
Sbjct: 327 A-GRALAQDEEVRRADLPFEFMLNALRLCDGFAPQDFMARTGLPLSAIAEGLASAERQGL 385

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           IER    R+R T RG+  L+ +
Sbjct: 386 IER-SMERIRATPRGLDFLNDL 406


>gi|148980494|ref|ZP_01816091.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
 gi|145961219|gb|EDK26533.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
          Length = 395

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/389 (35%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++    +       PR +
Sbjct: 8   PPALSLYVHIPWCVQKCPYCDFNSHALKTEIPEKEYIDALLEDLDTDIEKYQLNGMPRPL 67

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIFFGGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAG+ 
Sbjct: 68  HSIFFGGGTPSLFSPEGIGRLLQGIEQRIPFKPEIEITMEANPGTIEAERFAGYQKAGIT 127

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +
Sbjct: 128 RISVGVQSFEQEKLERLGRIHGQDEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALAD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  T+FY         LP ++   D++ L     +  G   
Sbjct: 188 LDKAIELDPPHLSWYQLTIEPNTMFY----YKTPTLPDDDDLWDIFELGHKKLADAGYVQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 244 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQ 303

Query: 310 KNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
                 +  EF +++E +  EF M   RL E    +D+    G   D         +  G
Sbjct: 304 NMVKPYISDEFEVANEDRPFEFFMNRFRLMEACPKQDFIDTTGLGFDAVQPTIEWAKELG 363

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     +  + T++G   L+ ++     
Sbjct: 364 YLNETD-THWQITEKGKLFLNDLLEAFMA 391


>gi|167580994|ref|ZP_02373868.1| coproporphyrinogen III oxidase [Burkholderia thailandensis TXDOH]
          Length = 405

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 127/381 (33%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 TFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV
Sbjct: 264 YAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GAAV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +    G +L          Q++G I     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSLASIGPALAQAQQRGLIVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|238026482|ref|YP_002910713.1| coproporphyrinogen III oxidase [Burkholderia glumae BGR1]
 gi|237875676|gb|ACR28009.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia glumae BGR1]
          Length = 406

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +Y+H+P+CV+KCPYCDFNSH  + +   ++ ++ +   +++        R + ++F 
Sbjct: 28  PLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQEYLDALRADLEQALPFVWGRQVHTVFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A AA+ +A + F   + DL++ALP Q++ +   +++ AL+
Sbjct: 148 IQSFNEAHLKALGRIHDSAQARAAVEIAASRFDNFNLDLMFALPNQSLDECRADIETALA 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  T+F K        +P ++ + D+ +     T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTMFAKFPP----AVPDDDASADMQDWIHERTAEAGYGHYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G  V 
Sbjct: 264 AQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTPVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G             +R+G I+R  F 
Sbjct: 323 EEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPFSTIEPALAEAERRGLIQR-DFE 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  T  G   L+  +  L +
Sbjct: 382 RIAPTPLGQRFLND-LQELFL 401


>gi|241663554|ref|YP_002981914.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12D]
 gi|240865581|gb|ACS63242.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12D]
          Length = 422

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/387 (36%), Positives = 220/387 (56%), Gaps = 13/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +E F+ +   +++    +   R + +
Sbjct: 38  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPEQGIPEERFLAAVRQDLEAALPMVWGRHVHT 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 98  IFIGGGTPSLLSAQGLDRLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  L+ LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 158 SIGIQSFNDAHLQALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 217

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+  +H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 218 ALSFDTNHVSLYHLTLEPNTYFAKYPP----ALPDDDAAFAMQDWIHARLAAAGYEHYEV 273

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     KHP+++L+     G 
Sbjct: 274 SAYAKAGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVIREMRHKHPDTYLRQAETAGG 333

Query: 314 AVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
           A V  E+  + +     EF++  LRL +G  V  ++   G  L    ER L   +++G +
Sbjct: 334 AAVMQEQREVDAADLPFEFMLNALRLTDGFPVTLFQERTGLPLRS-IERQLDVAEQRGLL 392

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     +R T+ G   L+  +  L +
Sbjct: 393 TR-DHVAIRLTELGQRFLND-LQELFL 417


>gi|90412034|ref|ZP_01220041.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
 gi|90327012|gb|EAS43391.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
          Length = 384

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/389 (35%), Positives = 209/389 (53%), Gaps = 20/389 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ----LTGPRSI 71
              L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + L ++           G R +
Sbjct: 4   PPPLSLYVHIPWCVQKCPYCDFNSHALKAEIPELDYIDALLEDLDIDLAKYQLEAGVRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L GI      S ++EIT+EANP +VE   F  Y++ G+N
Sbjct: 64  HSIFIGGGTPSLISPPEIGRLLKGIEARIPFSHDIEITMEANPGTVEAGRFVAYQEVGIN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS +++ L  LGR H + EA  A  LA        + DL++ LP Q++     +
Sbjct: 124 RISIGVQSFQDEKLTRLGRIHGSDEARKAAKLATEAGLNSFNIDLMHGLPDQSIDDAMYD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A++    HLS YQLTIE  T+FY         LP ++   D++     I +  G   
Sbjct: 184 LKQAIALNPPHLSWYQLTIEPNTMFYSKPP----TLPDDDDLWDIFEQGHQILADAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH +V      +  +++ KHP  +L   +
Sbjct: 240 YEISGYSKPGLQCRHNLNYWRFGDYLGIGCGAHGKVSFADGNITRTVKVKHPRGYLNPTK 299

Query: 310 KNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQ 365
                 ++KE  + + ++  EF M   RL E    +D+    G +LD      +  L+++
Sbjct: 300 ----PYLDKETQVDAAERPFEFFMNRFRLLEACPKQDYMDRTGLSLDTIDTNIQWALEQK 355

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             I+       + T+ G   L+ ++A   
Sbjct: 356 YLIDT--GDTWQITEHGKLFLNDLLAAFV 382


>gi|300311451|ref|YP_003775543.1| anaerobic coproporphyrinogen III oxidase oxidoreductase
           [Herbaspirillum seropedicae SmR1]
 gi|300074236|gb|ADJ63635.1| anaerobic coproporphyrinogen III oxidase oxidoreductase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 414

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 213/374 (56%), Gaps = 8/374 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH+P+CV+KCPYCDFNSH  +    ++ ++ +   +++    L   R I SIF G
Sbjct: 40  PLSLYVHFPWCVRKCPYCDFNSHEVKDGFPEQEYLDALRLDLEQALPLIWGRKIYSIFIG 99

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     + +++EIT+EANP + E + F+ YR +G+NR+S+G+
Sbjct: 100 GGTPSLLSAAGLDRLLSDLRTLLPLDADIEITMEANPGTFEADKFRSYRDSGINRLSIGI 159

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS     L+ LGR H+  +A  A+ +A   F   + DL+YALP+QT+ Q   ++Q A+ +
Sbjct: 160 QSFNSAHLQALGRIHDGGQAHQAVEIAHANFDNFNLDLMYALPQQTLEQARTDIQTAIDF 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  HLSLY LT+E  TLF K        +P E+ + D+ ++   +T+  G   YE+S ++
Sbjct: 220 APPHLSLYHLTLEPNTLFAKFPP----AVPDEDTSADMQDMIGELTTQAGYGNYEVSAYA 275

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + HNLNYW++GDY+GIG GAHS++      V     KHP+++L+ ++   H + E
Sbjct: 276 QPGRRARHNLNYWQFGDYLGIGAGAHSKLSFPHRIVRQMRYKHPQAYLQHIKAGTH-IQE 334

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
           +  +  +    EF++  LRL EG     +    G  L+   +     +R+G + R   + 
Sbjct: 335 EAEIGRDALGFEFMLNALRLTEGFPPNLFAERTGLALNQIGKQLDLAERKGMLYR-DHAL 393

Query: 376 LRCTQRGMTMLDSV 389
           +R T  G   L+ +
Sbjct: 394 IRPTPLGRRFLNDL 407


>gi|56550908|ref|YP_161747.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56542482|gb|AAV88636.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 393

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/386 (45%), Positives = 246/386 (63%), Gaps = 10/386 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +    L +Y+HWPFC+ KCPYCDFNSHV R  +    +  + L++M     LT  R +SS
Sbjct: 14  KQDMPLALYIHWPFCLAKCPYCDFNSHV-RPDIDAALWQDALLSDMAHEAALTQGRRLSS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+ P+ +A ++D   + W  +S++EIT+EANPSSVE + FQ    AGVNR+
Sbjct: 73  IFFGGGTPSLMSPETVAALIDAATRYWQPTSDIEITLEANPSSVEADRFQSLALAGVNRL 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG+Q+L++ SL FLGR HN  EA++A+ +A+  F R+SFDLIY  P Q++  WE EL++
Sbjct: 133 SLGIQALDDTSLHFLGRIHNVQEALSALDIAQKNFSRVSFDLIYGRPNQSLKDWEEELKQ 192

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL++  DHLSLYQLTIE+GT F+ + + G       + A DL++LT+ +T A G+ AYEI
Sbjct: 193 ALAFGSDHLSLYQLTIEEGTRFHSLVRQGQFTPMDGDKAADLFDLTRDMTKAAGIPAYEI 252

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+   +ES HNL YWRYGDYIGIG GAH R             K PE+WL  V+K   
Sbjct: 253 SNHARKNSESRHNLTYWRYGDYIGIGAGAHGR----RLNNVTIRHKKPENWLSAVQKQQQ 308

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIE 369
            + E+  LS + QA E ++MGLRL EGI  ++ +   G +    LD+   +    QG + 
Sbjct: 309 GIQEETPLSPKDQAIEAVLMGLRLTEGIHSENIQKRTGLDISEFLDLAAIQYYSDQGLLT 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                 LR T +G+ + D++I  +++
Sbjct: 369 -FNNGLLRITAQGVLLTDALIREISL 393


>gi|114564030|ref|YP_751544.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella frigidimarina NCIMB 400]
 gi|114335323|gb|ABI72705.1| coproporphyrinogen III oxidase, anaerobic [Shewanella frigidimarina
           NCIMB 400]
          Length = 379

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 127/382 (33%), Positives = 201/382 (52%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++        R + +IF G
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQQYVDALLDDLKQDLAYVQGRKVHTIFIG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  IL+G         N+EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 67  GGTPSLFDASQIQRILEGAQALIPFEDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L  LGR HN  EA  A   A+   +   + DL++ LP Q+  +   ++  A +
Sbjct: 127 QSFSKEKLNLLGRIHNEDEAKVAAEKAKQADYLSFNLDLMHGLPNQSFDEAMHDIDTATA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 187 LAPPHLSWYQLTIEPNTLFHSKPP----QLPDDENLWQIYEQGQQRLAALGYEQYEISAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH ++ +      V     KHP+ +L         
Sbjct: 243 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKITLPDSNRIVRTVKIKHPKGYLAA----DKY 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   +  E +  E+LM  LRL   I   ++E   G++ ++     +    +G +   +
Sbjct: 299 TFETTDVVEEDRPLEYLMNRLRLMTPIPKTEFEQRTGQSAEVVKLGMQKSIERGLLTETK 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +  + T +G   ++ +++   
Sbjct: 359 -THWQLTSKGHMFVNDLLSQFI 379


>gi|295677346|ref|YP_003605870.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
 gi|295437189|gb|ADG16359.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
          Length = 409

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 213/380 (56%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     + +++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGASFPESDYLDALRADLEMALPLIWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  I     + ++ EIT+EANP + E + F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDIRALLPLDADAEITLEANPGTFEADKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+A++A  A+ +A   F   + DL++ALPKQT+ + + +++ ALS
Sbjct: 152 IQSFNETQLKALGRIHDAAQARHAVEVAATTFDNFNLDLMFALPKQTLAECQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     T+A G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHQRTAAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  V  +  KHP ++++  R     V 
Sbjct: 268 ARPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRIVRQARYKHPTTFIEQARAGAS-VQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL EG  V  +    G ++       +  +R+  I R    
Sbjct: 327 EEHEVGPRDLPFEFMLNALRLVEGFPVHRFIERTGLSITTIEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T  G   L+ + A   
Sbjct: 386 RIAPTPLGQAFLNDLQALFL 405


>gi|77361524|ref|YP_341099.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76876435|emb|CAI87657.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 378

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 201/383 (52%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH ++ ++ +  ++Q  + +++    L   R I SIF G
Sbjct: 5   PLSLYVHVPWCVQKCPYCDFNSHGQKGEIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +L  +     +  N EIT+EANP +VE   F+ Y KAG+NRIS+GV
Sbjct: 65  GGTPSLLTGAAYTRLLSEVKSLIGLEDNCEITLEANPGTVETGRFKDYVKAGINRISIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS++   L+ LGR H + EA  A   A+       + DL++ LP QT+     +L++ ++
Sbjct: 125 QSMQNDKLKALGRIHGSDEANYAAEQAKEAGLNSFNLDLMHGLPGQTLDDALGDLKQIIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T F          LP +    D+    Q + +  G   YEIS +
Sbjct: 185 LNPPHISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGQELLAQAGYLQYEISGY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDYIGIG GAH +V   +  +    E  KHP  ++ +++     
Sbjct: 241 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTDANTGIITRTEKVKHPRGYMDLIK---PY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           + +   +  +  A EF M   RL E   + D+  L  + L  +    +   + G + +  
Sbjct: 298 LFKSWQVEQDDLAFEFFMNRFRLVEPCPINDFNALTQQPLQSQQHALQQAIKTGLLIQTD 357

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S  + T +G   L+ ++  L V
Sbjct: 358 -SHWQVTLKGQRFLNDLL-ELFV 378


>gi|330812372|ref|YP_004356834.1| coproporphyrinogen dehydrogenase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380480|gb|AEA71830.1| putative coproporphyrinogen dehydrogenase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 399

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/377 (34%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++         R +SSIFFGGGTP
Sbjct: 30  YVHIPWCVRKCPYCDFNSHTASPQLPEEEYVDALLADLDQDLHAVHGRPLSSIFFGGGTP 89

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SL   Q +  +L G+      + ++EIT+EANP + E   F  YR  G+NR+S+G+QS +
Sbjct: 90  SLFSAQALGRLLKGVEARIPFAQDIEITLEANPGTFEQEKFVAYRALGINRLSIGIQSFQ 149

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A++    
Sbjct: 150 QAKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLEDALSDLRQAIALKPT 209

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS YQLT+E  T+F+         LP ++   D+    Q++ + HG   YE+S ++  G
Sbjct: 210 HLSWYQLTLEPNTVFWNQPP----TLPEDDTLWDIQEAGQALLAEHGYAQYEVSAYAQPG 265

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKE 319
             + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +        ++
Sbjct: 266 RAARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYLNPAKSFQ---AGEK 322

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQFSRLR 377
            L++E+   EFLM  LRL  G+  + +    G  L    E  R  ++ G + +V+ +RL 
Sbjct: 323 TLANEELPFEFLMNALRLTAGVEARLYPERTGLPLQSLAEGRREAEQSGLL-QVEPTRLA 381

Query: 378 CTQRGMTMLDSVIANLA 394
            T+RG   L+ ++    
Sbjct: 382 ATERGQLFLNDLLQTFL 398


>gi|269960450|ref|ZP_06174823.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           harveyi 1DA3]
 gi|269834877|gb|EEZ88963.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           harveyi 1DA3]
          Length = 390

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 142/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    ++  R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQRKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++  G  R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFGDGRIVRTTKVKHPRGYLMAYQ 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 ++ E L + E +  EF M   RL E    +D+    G  L    +        G
Sbjct: 300 NMVKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDYIDTTGLPLSSIQDTIDWALEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   +    + T++G   L+ ++     
Sbjct: 360 YLSETEA-HWQITEKGKLFLNDLLEAFMA 387


>gi|315303221|ref|ZP_07873871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria ivanovii FSL F6-596]
 gi|313628403|gb|EFR96886.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria ivanovii FSL F6-596]
          Length = 388

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 16  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTVAKGPIAPVDTVFVGGG 74

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 75  TPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 134

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 135 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 194

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 195 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAK 254

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N     ++
Sbjct: 255 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENILPTFQQ 310

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +G++E  + + 
Sbjct: 311 KELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAKGWLENNEEN- 369

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 370 VALTRNGRFLGNNVFQEFL 388


>gi|224501584|ref|ZP_03669891.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL R2-561]
          Length = 385

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 196/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTVAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LPS++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPSQDAEANMYDLLLNEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENILPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRSGRFLGNNVFQEFL 385


>gi|296284091|ref|ZP_06862089.1| coproporphyrinogen III oxidase [Citromicrobium bathyomarinum JL354]
          Length = 387

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/384 (46%), Positives = 238/384 (61%), Gaps = 10/384 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            ++ L +Y+HWPFC+KKCPYCDFNSHV R  V  + +    L ++     LT  R + SI
Sbjct: 3   AADDLALYIHWPFCLKKCPYCDFNSHV-RDDVDADAWQAGLLADLAHEHALTQGRRVGSI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P     +++   + W ++ + EIT+EANP+S E   F  +R AGVNR+S
Sbjct: 62  FFGGGTPSLMPPALAGSLIEQAQRLWGLAPDAEITLEANPTSYEAGKFADFRAAGVNRVS 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL E++L FLGR H+A+EA+AA+  A+ +F R++FDLIYA P Q+   WE EL RA
Sbjct: 122 LGVQSLHEEALAFLGREHSAAEAMAAVESAQGLFGRVTFDLIYARPGQSAEAWEAELARA 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L++  +HLSLYQLTIE GT F      G L     + A DL+  TQ    A GL AYEIS
Sbjct: 182 LAFGTEHLSLYQLTIEPGTGFAGAVARGRLTPMDPDEAADLFVQTQEQMRAAGLPAYEIS 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GA+S HNL YWRY DY+GIGPGAH R       +A    K PE++L+ V +NGH 
Sbjct: 242 NHARPGAQSHHNLTYWRYRDYVGIGPGAHGR----RGGMATIRHKKPEAFLRRVGENGHG 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIER 370
           + E+  L  E+Q  E L+MGLRL EG+ +       G   D   + +        GF+E 
Sbjct: 298 ISEERALGREEQLSEALLMGLRLAEGLDLAALATRFGTTPDALVDADRAAFYADLGFVE- 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +   RL  T +GM +LD+++A L 
Sbjct: 357 LDGDRLTITPQGMPLLDALLAELV 380


>gi|126730099|ref|ZP_01745911.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
 gi|126709479|gb|EBA08533.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
          Length = 385

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 179/377 (47%), Positives = 239/377 (63%), Gaps = 3/377 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+YVHWPFC  KCPYCDFNSHV R ++ Q  +  +  +E++ +   T  R + SIFFGG
Sbjct: 10  FGLYVHWPFCEAKCPYCDFNSHVVR-EIDQTRWAAALASEVRRVAAETSGRVLGSIFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +A ++D     WT  +N+EIT+EANP SVE   F+GY +AGVNR+SLGVQ
Sbjct: 69  GTPSLMAPETVAAVIDAARDGWTFGNNIEITLEANPRSVEAARFEGYARAGVNRVSLGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL E  LR LGR H+ +EA AA  +AR +F R+SFDLIYA   QT+  WE EL  AL  A
Sbjct: 129 SLREPDLRKLGRLHDVTEARAAFAIARQVFDRVSFDLIYARQGQTLAGWEEELGEALDMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F+   + G L  LPS+++  D+Y LTQ + +  G+ AYE+SNH+
Sbjct: 189 VDHLSLYQLTIEPGTAFWDRSQAGKLRGLPSDDLGADMYELTQEMCARAGMPAYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
              AES HNL YWRYGD++G+GPGAH R  +   R+     + P  WL  V +       
Sbjct: 249 GADAESRHNLVYWRYGDWVGVGPGAHGRFDLNRQRMESVAWRMPGRWLTAVEEVKSGDEL 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +  +    QA E+LMMGLRL EG+ +     ++     ++  ++LQ    +E V   RL 
Sbjct: 309 RSSVDGNDQAIEYLMMGLRLSEGLDLARLHQMSRNVATLKQIKDLQEMQLLE-VYSGRLV 367

Query: 378 CTQRGMTMLDSVIANLA 394
            T RG  +L+SVI +L 
Sbjct: 368 ATPRGRLVLNSVIESLL 384


>gi|330505400|ref|YP_004382269.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
 gi|328919686|gb|AEB60517.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
          Length = 384

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/377 (34%), Positives = 214/377 (56%), Gaps = 12/377 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++    Q    R ++SIFFG
Sbjct: 11  PLALYIHIPWCVRKCPYCDFNSHAAGPTLPEEEYVDALLADLDIDLQHVHGRPLTSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    + ++EIT+EANP + E   F+GYR  G+NR+S+GV
Sbjct: 71  GGTPSLFSDRALGRLLEGVEQRVGFAPDIEITLEANPGTFEQAKFKGYRSLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR H+ SEA+ A  +AR   F   + DL++ LP+Q++     +L+ A+S
Sbjct: 131 QSFQEAKLKALGRIHDGSEAVRAADMARAAGFDNFNLDLMHGLPEQSIEDALFDLRTAIS 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+         LP +++  D+    Q++ +A G   YE+S +
Sbjct: 191 QGPTHLSWYQLTMEPNTVFWSQPP----TLPEDDLLWDIQEAGQALLAAEGYAQYEVSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G ++ HNLNYW +GD++GIG GAH+++   + R+      + P+ +L   +      
Sbjct: 247 ARPGKQARHNLNYWTFGDFLGIGAGAHAKLSAPAGRIQRTWKTRLPKDYLDPAK---VFQ 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
             +  L + +   E+LM  LRL  G   + +    G  L    +  R  +RQG + +   
Sbjct: 304 AGERVLEASELPFEYLMNVLRLTGGAPAELFSQRTGLPLQQLEQARREAERQGLL-QADP 362

Query: 374 SRLRCTQRGMTMLDSVI 390
           +RL  T +G   L+ ++
Sbjct: 363 TRLVATAKGQLFLNDLL 379


>gi|220936123|ref|YP_002515022.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219997433|gb|ACL74035.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 387

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/383 (33%), Positives = 201/383 (52%), Gaps = 11/383 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  R  V +  ++ + L +++        R + S+F G
Sbjct: 5   PLSLYIHLPWCVRKCPYCDFNSHEAREAVPEAAYVDALLADLESELPRVWGRRLESVFLG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ +  +   +        ++E+T+EANP + +   F+GYR+AGVNR+S+GV
Sbjct: 65  GGTPSLFSPEALDHLFSELRARLPWRPDMEVTLEANPGTTDAGRFRGYREAGVNRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  LR LGR H A EA  A   AR+  F  ++ DL++ LP QT+     +L   L+
Sbjct: 125 QSFDDDQLRQLGRIHGAREARVAFEAARSAGFENINIDLMFGLPGQTVAGALKDLAEGLA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HLS YQLT+E  T F         VLP E+   D++   Q   +  G   YE+S +
Sbjct: 185 LGPEHLSWYQLTLEPNTRFAAQPP----VLPEEDTLWDMHTAGQEHLAEAGYTQYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHA 314
           +  G    HNLNYW +GDY+GIG GAH ++ + +    +   KH  P  +++  R  G A
Sbjct: 241 ARAGRPCRHNLNYWEFGDYLGIGAGAHGKISLPAEGRILRRWKHRQPRQYMEAARS-GEA 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
              +  L+ E+   EF++  +RL +G+ +  +    G   +           +G +    
Sbjct: 300 ASGEHTLTREETVFEFMLNAMRLNQGVPLALFTERTGLAPEALEPMRGEAVARGLLT-DD 358

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             RL  T+ G   L+ + A   V
Sbjct: 359 PERLEPTELGRRFLNDLQALFLV 381


>gi|16803516|ref|NP_465001.1| coproporphyrinogen III oxidase [Listeria monocytogenes EGD-e]
 gi|224500505|ref|ZP_03668854.1| coproporphyrinogen III oxidase [Listeria monocytogenes Finland
           1988]
 gi|254827764|ref|ZP_05232451.1| hemN [Listeria monocytogenes FSL N3-165]
 gi|284801863|ref|YP_003413728.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5578]
 gi|284995005|ref|YP_003416773.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5923]
 gi|16410905|emb|CAC99554.1| hemN [Listeria monocytogenes EGD-e]
 gi|258600144|gb|EEW13469.1| hemN [Listeria monocytogenes FSL N3-165]
 gi|284057425|gb|ADB68366.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5578]
 gi|284060472|gb|ADB71411.1| coproporphyrinogen III oxidase [Listeria monocytogenes 08-5923]
          Length = 385

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTVAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENILPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRSGRFLGNNVFQEFL 385


>gi|308050659|ref|YP_003914225.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
 gi|307632849|gb|ADN77151.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
          Length = 379

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/382 (36%), Positives = 217/382 (56%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C +KCPYCDFNSH R+  + ++ +I + L ++     L   R ++SIF G
Sbjct: 5   PLSLYIHIPWCEQKCPYCDFNSHARKGAIPEQEYIAALLADLDRDLALAQGRMLTSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSLI P  IA +L G+A+    +   E+T+EANP ++E + F+ YR+AGVNR+S+GV
Sbjct: 65  GGTPSLISPAGIASLLSGVAERLPFAPQCEVTMEANPGTLEADRFRPYREAGVNRLSVGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H A EA  A + AR   F R + DL++ LP Q++T    +L++A++
Sbjct: 125 QSFQQDKLLILGRIHGAEEARRAANEARKAGFERFNLDLMHTLPGQSVTDALYDLEQAIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F          LP ++    ++   +++  A G   YEIS  
Sbjct: 185 LKPPHLSWYQLTIEPNTQFASKPP----ELPDDDTQWAIFEQGKAMLEAAGYRQYEISAW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ KHP+ +L+        +
Sbjct: 241 AQPGYQCEHNLNYWRFGDYLGIGCGAHGKITQPDGTLLRTVKVKHPKGYLE---PGRDPM 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
            E+  +  E QA E+ M  LRL E + + +         D +  + L    ++G IER  
Sbjct: 298 AEQYSVEREDQALEYYMNRLRLMEPMPLSELSERTQLTPD-DVAKPLNWALQRGLIER-D 355

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             +++ T++G   L+ ++A   
Sbjct: 356 NQQMQLTEQGHRFLNELLAQFL 377


>gi|78049073|ref|YP_365248.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325927892|ref|ZP_08189116.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas perforans
           91-118]
 gi|78037503|emb|CAJ25248.1| putative oxygen-independent coproporhyriogen III oxigenase
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|325541732|gb|EGD13250.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas perforans
           91-118]
          Length = 385

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/391 (36%), Positives = 215/391 (54%), Gaps = 12/391 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDLALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQRLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+S+L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAQEHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQR 364
                  +   E +  E+   E+++  LRL EG  + D+E   G     +D    R    
Sbjct: 298 AGTAAS-IGGDEIVPGERLPFEYMLNLLRLHEGFRLSDFEASTGLAACVIDAPLARA-VA 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG++ R Q  R+  T+ G    + V+    V
Sbjct: 356 QGWMRR-QDGRVVPTELGRRFTNDVVELFLV 385


>gi|78065575|ref|YP_368344.1| coproporphyrinogen III oxidase [Burkholderia sp. 383]
 gi|77966320|gb|ABB07700.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia sp. 383]
          Length = 404

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/381 (34%), Positives = 215/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  + +   +  ++ +   +++    L   R + +IF 
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKGERFPETEYLDALRADLEQALPLVWGRQVHTIFI 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 88  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 147

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H+ ++A AA+ +A   F   + DL++ALP QT+ +   +++ ALS
Sbjct: 148 IQSFNETHLKALGRIHDTTQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDVETALS 207

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           YA  HLSLY LT+E  TLF K       V+P ++ + D+     + T+  G   YE+S +
Sbjct: 208 YAPPHLSLYHLTLEPNTLFAKFPP----VVPDDDASADMQEWIHARTAEAGYGHYEVSAY 263

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G AV 
Sbjct: 264 AKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMA-GTAVQ 322

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V ++    G  +       +  +R+G I R  F+
Sbjct: 323 EEREVGARDLPFEFMLNTLRLVEGFPVHNFAERTGLPMSTIEPALQEAERRGLIAR-DFA 381

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 382 QIAPTPLGQRFLND-LQELFL 401


>gi|311106530|ref|YP_003979383.1| oxygen-independent coproporphyrinogen III oxidase 2 [Achromobacter
           xylosoxidans A8]
 gi|310761219|gb|ADP16668.1| oxygen-independent coproporphyrinogen III oxidase 2 [Achromobacter
           xylosoxidans A8]
          Length = 406

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 122/375 (32%), Positives = 217/375 (57%), Gaps = 7/375 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +  ++++        R + S+F G
Sbjct: 31  PLSVYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRSDLEQALPSIWGRQVVSVFIG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +L  +     +  + EIT+EANP + E   F+ Y  +GV R SLG+
Sbjct: 91  GGTPSLLSSEGLDELLAMLRACLNLWPDAEITMEANPGTAEAGRFRDYAASGVTRFSLGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR H++++A AAI +A+    R++ D+++ALP QT+     +L++A+++
Sbjct: 151 QSFDDAQLKKLGRIHDSAQARAAIEMAQRAVSRVNLDMMFALPGQTLEACVADLRQAVAF 210

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K   +    LP ++ +  + +  ++  +A GL  YE+S ++
Sbjct: 211 GTEHLSLYHLTMEPNTVFAKFPPE---DLPDDDTSAAMQDAVEAELAAAGLARYEVSAYA 267

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAVV 316
             GA   HNLNYW +GDY+G+GPGAH ++      +  +  + P+SW++  + ++G  + 
Sbjct: 268 KPGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRILREARLRSPDSWMQAAMARDGSHIA 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
           E   +  ++   EF++  LRL++G++   +    G +L           ++G ++    +
Sbjct: 328 ESRQVGPDELPFEFMLNALRLKDGVAATAFNERTGLSLAAIAHQLEAASKRGLLD-ADPT 386

Query: 375 RLRCTQRGMTMLDSV 389
           RLR T  G   L+ +
Sbjct: 387 RLRATPLGWRFLNDL 401


>gi|257092564|ref|YP_003166205.1| coproporphyrinogen III oxidase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045088|gb|ACV34276.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 417

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 139/402 (34%), Positives = 211/402 (52%), Gaps = 17/402 (4%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---------RRYKVGQENFIQSF 55
           SA  N +  +    L +YVH P+CV+KCPYCDFNSH          R+  + + +++ + 
Sbjct: 19  SAAGNPVEFRNPPPLALYVHVPWCVQKCPYCDFNSHALPVGSSIGQRQTAIPESDYLAAL 78

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           + +++    L   R + S+F GGGTPSL+  + +  +L  +     +  N EIT+EANP 
Sbjct: 79  IADLESALPLVWGRRVDSVFIGGGTPSLLSGEGVDELLAAVRSRLPLLPNAEITLEANPG 138

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
           +VE   F  +R AGVNR+SLG+QS   + L  LGR H+  +A  AI +A + F   + DL
Sbjct: 139 TVEAGKFAAFRAAGVNRLSLGIQSFNSRHLTALGRIHDDRDARLAIGIAASHFDNFNLDL 198

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +Y LP QT+ +   ++  AL+ A  HLS YQLTIE  T F          LP  +   D+
Sbjct: 199 MYGLPGQTLAEALADVDAALACAPPHLSCYQLTIEANTAFAARPP----ALPDPDTCADM 254

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
            +  ++  +A G   YEIS  +  G E  HNLNYW++GDY+GIG GAH ++ +       
Sbjct: 255 QDAIETKLAAAGYRHYEISAFARAGQECRHNLNYWQFGDYLGIGAGAHGKLTLHDRVQRQ 314

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL- 354
              K PE +L  V   G  V ++  ++  +   EF+M  LRL EG +   +EM     L 
Sbjct: 315 MRWKRPEQYLAKVAA-GTPVQQEFTVAPAELPCEFMMNALRLVEGFAAPLFEMRTALPLI 373

Query: 355 -DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                 R  +R G ++R Q  R+  ++RG   L+ ++     
Sbjct: 374 SIESQLRQAERDGLLQR-QGQRIAPSERGRRFLNQLVQRFLA 414


>gi|326389867|ref|ZP_08211431.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325994135|gb|EGD52563.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 375

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 207/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L  M+     T   ++ S++ 
Sbjct: 2   REIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALL--MEIESNSTKDYNVVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+  G+NR+S+G
Sbjct: 59  GGGTPNLLPPFYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKDNGINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L+++GR H   +      L +  F  ++ DL+YALP QT  +W+  L+  + 
Sbjct: 119 LQAFQNRLLKYIGRIHTIEDFFGNYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN 
Sbjct: 179 LQPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HN+ YW   +Y+G G GAHS ++   +    S  ++ + ++K + +   AV 
Sbjct: 239 ALPTFECRHNILYWECKNYLGFGAGAHSYMEGVRY----SNIENIKDYIKSILERKSAVK 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
           EK  L+ E +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q+   +G IE +  
Sbjct: 295 EKIKLAKEDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEFYKKVIQKYLNEGLIE-IDN 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             ++ T+RG+ + + +     
Sbjct: 354 ECVKLTERGIDVSNVIFEEFL 374


>gi|310817158|ref|YP_003965122.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
 gi|308755893|gb|ADO43822.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
          Length = 390

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/381 (46%), Positives = 238/381 (62%), Gaps = 4/381 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC+ KCPYCDFNSHV +  + Q  +  ++  E+  +   T  R ++S+F
Sbjct: 12  DGGFGLYIHWPFCMAKCPYCDFNSHVAQ-HIDQSRWAAAYEVEIDRIAAETEGRVLNSVF 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +  +L  +   W+++++VEIT+EANP+SVE   F GYR AGVNRIS+
Sbjct: 71  FGGGTPSLMLPETVDRVLSRVRARWSLANDVEITLEANPTSVEAGRFHGYRDAGVNRISM 130

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL E+ L+ LGR H+ +EA AA  +AR++F R+SFDLIYA   QT   W  EL  AL
Sbjct: 131 GVQSLNERDLKALGRMHSVTEARAAFDIARDVFDRVSFDLIYARQHQTPEDWRAELSEAL 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S AVDHLSLYQLTIE  T F   +  G L  LP E+ A +++++TQ +    G  AYEIS
Sbjct: 191 SMAVDHLSLYQLTIEPNTAFGARYDRGLLRGLPDEDNADEMWDITQEVADRLGFPAYEIS 250

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HN  YWRYGDY GIGPGAH R+ +   R A      P  WL+ V K G +
Sbjct: 251 NHARAGAESRHNSVYWRYGDYAGIGPGAHGRLTLNGQRYATETPLAPGRWLEDVEKTGKS 310

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L+   Q +EF+MMGLRL EGIS      L G  L    +R +   G +E+V   
Sbjct: 311 ETVRAALTPTDQLEEFVMMGLRLSEGISKARLYRLGGARLQANIDR-VIEIGMLEQV-GD 368

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T  G  +L++++  +  
Sbjct: 369 SLRTTTAGRPVLNAILREVLA 389


>gi|290894236|ref|ZP_06557205.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J2-071]
 gi|290556233|gb|EFD89778.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J2-071]
          Length = 385

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 196/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LPS++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPSQDAEANMYDLLLNEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ ++KN     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQKNILPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDTTFANAIQKTTSKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRNGRFLGNNVFQEFL 385


>gi|298485015|ref|ZP_07003112.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298160425|gb|EFI01449.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 404

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L  V+      
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSNPDGRIMRTWKTRLPKDYLNPVK---PFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|91784890|ref|YP_560096.1| coproporphyrinogen III oxidase [Burkholderia xenovorans LB400]
 gi|91688844|gb|ABE32044.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia xenovorans LB400]
          Length = 409

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 128/381 (33%), Positives = 215/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     +  ++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGDTFPETEYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E + F  +R +GV+R+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEADKFAQFRASGVSRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A   F   + DL++ALP QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSAQARHAVEVASTTFDNFNLDLMFALPGQTLAECQADVEMALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 268 ARPHRQSRHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPTTFIEQAKA-GTAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G ++       +  +R+  I R    
Sbjct: 327 EEHEVGTRDLPFEFMLNALRLVEGFPVHRFIERTGMSMTSIEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 386 KIAPTPLGQAFLND-LQELFL 405


>gi|56476730|ref|YP_158319.1| coproporphyrinogen III oxidase [Aromatoleum aromaticum EbN1]
 gi|56312773|emb|CAI07418.1| Oxygen-independent coprophorphyrinogen III oxidase [Aromatoleum
           aromaticum EbN1]
          Length = 407

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/385 (35%), Positives = 202/385 (52%), Gaps = 11/385 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSI 71
            S  L +YVH+P+CVKKCPYCDFNSH  R    ++ ++ +I + L +++        R +
Sbjct: 27  ASPPLALYVHYPWCVKKCPYCDFNSHASRGGPGEIPEQAYIDALLADIETALPQVWGRRV 86

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+F GGGTPSL+    +  +L G+     +    EIT+EANP +VE   F+ Y  AGVN
Sbjct: 87  LSVFIGGGTPSLMSAAALDRLLTGVRMLLQLDPLAEITLEANPGTVEAGRFRDYCAAGVN 146

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+QS ++  L  LGR H+  EA  AI  A   F R++ DL+YALP+QT  Q   +L
Sbjct: 147 RLSLGIQSFDDAQLVRLGRIHDGREARVAIDTALANFDRVNLDLMYALPEQTPEQALADL 206

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL+    HLS YQLT+E  T F+         LP  + A D+ +  ++     G   Y
Sbjct: 207 DTALATGATHLSCYQLTLEPNTPFHHAPP----PLPDTDTAADMQDAIEARLGGAGFRHY 262

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E S  +  G E  HNLNYW +GDY+GIG GAH ++      V     KHP  +L   +  
Sbjct: 263 ETSAFARPGEECRHNLNYWTFGDYLGIGAGAHGKLSSFEGIVREMRHKHPGRYLDAAKSR 322

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
              V E+  +   +   EF+M  LRL  G+  + +    G  L +  +  +  + QG +E
Sbjct: 323 EF-VQERRTIGVTELPFEFMMNALRLSGGVPRRLFAERTGLPLAVIEDELKAAREQGLVE 381

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
                 +R T+RG   L+ ++    
Sbjct: 382 VT-PELIRPTERGRHFLNDLLTLFL 405


>gi|83720503|ref|YP_442123.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|257138311|ref|ZP_05586573.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|83654328|gb|ABC38391.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Burkholderia thailandensis E264]
          Length = 405

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+      YE+S 
Sbjct: 208 TFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQASYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYW +GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV
Sbjct: 264 YAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GAAV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +    G +L          Q++G I     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSLASIGPALAQAQQRGLIVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|254829765|ref|ZP_05234420.1| coproporphyrinogen III oxidase [Listeria monocytogenes 10403S]
          Length = 385

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICFYCDFNKVFLEGQ-PVDEYVDLLIKEMELTVAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENILPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRSGRFLGNNVFQEFL 385


>gi|323493574|ref|ZP_08098695.1| HemN family oxidoreductase [Vibrio brasiliensis LMG 20546]
 gi|323312097|gb|EGA65240.1| HemN family oxidoreductase [Vibrio brasiliensis LMG 20546]
          Length = 390

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/394 (35%), Positives = 206/394 (52%), Gaps = 14/394 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--- 67
           M      +L +YVH P+CV+KCPYCDFNSH  +  + ++ +I + L +++   +      
Sbjct: 1   MNTLIPPALSLYVHIPWCVQKCPYCDFNSHALKADIPEQEYIAALLQDLETDIERYQLNN 60

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            PR + SIF GGGTPSLI  + IA +L GI       S++EIT+EANP ++E   F GY+
Sbjct: 61  SPRPLHSIFIGGGTPSLISAEGIATLLQGIEARIPFKSDIEITMEANPGTIEAERFAGYQ 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMT 185
           KAGV RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ 
Sbjct: 121 KAGVTRISVGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSVE 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +L +A+     HLS YQLTIE  T+FY         LP ++   D++       + 
Sbjct: 181 QALADLDKAIELDPPHLSWYQLTIEPNTMFY----YKQPTLPDDDDLWDIFEQGHKKLAD 236

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESW 304
            G   YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +
Sbjct: 237 AGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGY 296

Query: 305 LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           L          +  E  +    +  EF M   RL E    +D+    G       E    
Sbjct: 297 LAAFDNMVKPYLSDETEVDDTDRPFEFFMNRFRLIEACPKQDFLDTTGLGFTAIQETIDW 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              +G+I+    S  + T++G   L+ ++    V
Sbjct: 357 AIEKGYIDESD-SHWQITKKGKLFLNDLLEAFMV 389


>gi|307266438|ref|ZP_07547974.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918546|gb|EFN48784.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 375

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 206/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDFNS+   Y    +++I++ L  M+     T   ++ S++ 
Sbjct: 2   REIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFDDYIRALL--MEIESNSTKDYNVVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  I  IL  + KN+ +    EITIE NP  +     + Y+  G+NR+S+G
Sbjct: 59  GGGTPNLLPPSYIEKILKSVFKNYKILDGCEITIEMNPGLITEEKLKIYKDNGINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L+++GR H   +      L +  F  ++ DL+YALP QT  +W+  L+  + 
Sbjct: 119 LQAFQNRLLKYIGRIHTIEDFFENYELVKKFFGNINIDLMYALPTQTFKEWQETLKEVVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +E  T FY++++ G L +  E   + +Y+         G H YEISN 
Sbjct: 179 LQPTHVSTYSLILEPNTSFYRLYEKGQLPIVDEEEELKMYHWGIEFLKEKGYHHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HN+ YW   +Y+G G GAHS ++   +    S  ++ + ++K + +   AV 
Sbjct: 239 ALPTFECRHNILYWECKNYLGFGAGAHSYMEDVRY----SNIENIKDYIKSILERKSAVK 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
           EK  L+ E +  EF+ +G+R+ +G+  KD++   G +L    ++ +Q+   +G IE +  
Sbjct: 295 EKIKLAKEDRMAEFMFLGMRMTKGVCDKDFKKRFGISLFEFYKKVIQKYLNEGLIE-IDN 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
              + T+RG+ + + +     
Sbjct: 354 ECAKLTERGIDVSNVIFEEFL 374


>gi|237798168|ref|ZP_04586629.1| HemN family oxidoreductase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021020|gb|EGI01077.1| HemN family oxidoreductase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 404

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYDRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHE-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           SRL  T +G   L+ ++    +
Sbjct: 383 SRLIATPQGQLFLNDLLQYFLI 404


>gi|254522825|ref|ZP_05134880.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas sp. SKA14]
 gi|219720416|gb|EED38941.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas sp. SKA14]
          Length = 408

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/384 (34%), Positives = 214/384 (55%), Gaps = 10/384 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH P+CV+KCPYCDFNSH  + ++  + +I + L ++     L   R + S+F
Sbjct: 28  PPPLSLYVHLPWCVRKCPYCDFNSHQAKGELPFDAYIDALLRDLDQDLPLVWGRVVHSVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL  P+ I   L   +     + N EIT+E NP + E   F  YR AGVNR+S 
Sbjct: 88  FGGGTPSLFPPEAIDRFLQQASARLRFAPNAEITLETNPGTAEHGRFDRYRAAGVNRLSF 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS ++  L+ LGR H++ EA  A+ +A++      + DL+YALP+QT+   E +L+RA
Sbjct: 148 GIQSFDDAMLKRLGRIHDSGEAERAVKMAQDAGYDNFNIDLMYALPEQTLAGAEADLERA 207

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +    H+S YQLT+E  T+F+         +P E+ A D+    Q++ +  G   YE+S
Sbjct: 208 FALQPAHISHYQLTLEPNTVFFARPPQ---GIPDEDNAWDMQEHCQALLAQAGFGQYEVS 264

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNG 312
            ++  G +S HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+++L+      
Sbjct: 265 AYARPGRQSAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKLKHPQAYLESAGTPA 324

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIER 370
                 + ++  +   E+++  LRL EG S++D+E   G  R++      +  ++G++  
Sbjct: 325 S-FGGDDVIAPGRLPFEYMLNLLRLHEGFSLRDFESRTGLPRSVLDAPLADAVQRGWLHM 383

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
                ++ T+ G    + V++   
Sbjct: 384 AD-GHVQPTELGRRFTNDVVSLFL 406


>gi|156975839|ref|YP_001446746.1| coproporphyrinogen III oxidase [Vibrio harveyi ATCC BAA-1116]
 gi|156527433|gb|ABU72519.1| hypothetical protein VIBHAR_03584 [Vibrio harveyi ATCC BAA-1116]
          Length = 390

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    ++  R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLMAYQ 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 ++ E L + E +  EF M   RL E    +D+    G  L    E        G
Sbjct: 300 NMVKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDYIDTTGLPLSSIQETIDWALEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   + +  + T++G   L+ ++     
Sbjct: 360 YLSETE-THWQITEKGKLFLNDLLEAFMA 387


>gi|330972625|gb|EGH72691.1| HemN family oxidoreductase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 404

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 211/382 (55%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARRAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQEAGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|167619071|ref|ZP_02387702.1| coproporphyrinogen III oxidase [Burkholderia thailandensis Bt4]
          Length = 405

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPEHDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 TFAPPHLSLYHLTLEPNTYFAKFPP----AVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYW +GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV
Sbjct: 264 YAKPHRQSKHNLNYWCFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GAAV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +    G +L          Q++G I     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPTHSFAERTGMSLASIGPALAQAQQRGLIVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|217964378|ref|YP_002350056.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes HCC23]
 gi|217333648|gb|ACK39442.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria monocytogenes HCC23]
 gi|307571057|emb|CAR84236.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes L99]
          Length = 385

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ ++KN     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQKNILPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDTTFANAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRNGRFLGNNVFQEFL 385


>gi|304410077|ref|ZP_07391696.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|307302211|ref|ZP_07581969.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
 gi|304351486|gb|EFM15885.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|306914249|gb|EFN44670.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
          Length = 388

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 204/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF G
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 76  GGTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 135

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 136 QSFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 196 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQKLAALGYEQYEISAY 251

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L       + 
Sbjct: 252 AKPGYQCKHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNY 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E     +++G +    
Sbjct: 308 TFESIEVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTEGMEKAKQRGLLTE-S 366

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 367 AEHWQLTSKGHMFVNDLLTQFC 388


>gi|104779591|ref|YP_606089.1| coproporphyrinogen III oxidase [Pseudomonas entomophila L48]
 gi|95108578|emb|CAK13272.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas entomophila L48]
          Length = 386

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 207/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ +I + L ++         R IS+IFFG
Sbjct: 13  PLSLYIHIPWCVRKCPYCDFNSHQAGPSLPEDEYIDALLADLDQEMPAVQGRPISTIFFG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    + ++EIT+EANP + E   F+ YR+ G+NR+S+GV
Sbjct: 73  GGTPSLFSADALDRLLRGVEQRIPFAPDIEITLEANPGTFEQEKFKAYRQTGINRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  LGR HN  E   AA       F   + DL++ LP Q++     +L++A+ 
Sbjct: 133 QSFQPAKLERLGRIHNGDEAVRAAGMARAAGFDNFNMDLMHGLPDQSLDDALGDLRQAIE 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++ + HG   YE+S +
Sbjct: 193 LAPTHLSWYQLTVEPNTVFWNQPP----ELPEDDILWDIQEAGQALMAEHGYRQYEVSAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +     + HNLNYWR+GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 249 AQADRAARHNLNYWRFGDFIGIGAGAHGKLSFPDGRILRTWKTRLPKDYL---NPSKPYK 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             ++ L +++   EFLM  LRL +G+  + + +  G  L    E  R  +++G + RV+ 
Sbjct: 306 AGEKLLPADELPFEFLMNALRLTDGVEAELFSLRTGLPLAQLTEARREAEQKGLL-RVEP 364

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG   L+ ++    
Sbjct: 365 DRLAATPRGQLFLNDLLQYFL 385


>gi|254852100|ref|ZP_05241448.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL R2-503]
 gi|300765619|ref|ZP_07075598.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes FSL N1-017]
 gi|258605402|gb|EEW18010.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL R2-503]
 gi|300513720|gb|EFK40788.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           monocytogenes FSL N1-017]
          Length = 385

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 196/389 (50%), Gaps = 10/389 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N       S  VY+H PFC   C YCDFN      +   + ++   + EM+         
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIA 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +   
Sbjct: 62  PVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHS 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           VNRIS+GVQS   + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++
Sbjct: 122 VNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQ 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG 
Sbjct: 182 DTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGR 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +
Sbjct: 242 KQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPL 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
           +KN     +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +
Sbjct: 298 QKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAK 357

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++E  + + +  T+ G  + ++V     
Sbjct: 358 GWLENNEEN-VALTRSGRFLGNNVFQEFL 385


>gi|123443632|ref|YP_001007604.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090593|emb|CAL13462.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDVPLVSGREISTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSAEKLTRLGRIHGPDEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F          LP ++   D++     + S  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSTAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  + +  +  EF M   RL E     D+    G     +  + +  L ++  IE  +
Sbjct: 297 DKQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T++G   L+S++  L +
Sbjct: 357 Y--WQITEKGKLFLNSLL-ELFL 376


>gi|290476324|ref|YP_003469228.1| putative oxidase [Xenorhabdus bovienii SS-2004]
 gi|289175661|emb|CBJ82464.1| putative oxidase [Xenorhabdus bovienii SS-2004]
          Length = 376

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 137/383 (35%), Positives = 215/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L +++    +   R +S+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLRADLPMIEDREVSTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+  +  +SS  EIT+EANP +VE   F  Y+KAGVNRIS+GV
Sbjct: 66  GGTPSLLSAEGMQRLLDGVRASLPLSSQAEITMEANPGTVEAGRFSAYQKAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A HLA ++  R  + DL++ LP QT+ +   +L++A+ 
Sbjct: 126 QSFGSDKLIRLGRIHGPDEAKRAAHLAADLGLRSFNLDLMHGLPNQTLNEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F         VLP ++   D+++    + +A G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTSFGSRPP----VLPDDDALWDIFSQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  +
Sbjct: 242 AKAGYQCQHNLNYWRFGDYLGIGCGAHGKISFEDGRILRTVKTKHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  L +E +  EF M   RL E +   D+    G     +  + +  L + G+I    
Sbjct: 297 DQQNQLDNEDRPFEFFMNRFRLLEAMPRHDFSDFTGLPESAIRPQLDEALAK-GYITE-N 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + T+ G   L+S++  L +
Sbjct: 355 ATHWQITKHGKLFLNSLL-ELFL 376


>gi|113969531|ref|YP_733324.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-4]
 gi|113884215|gb|ABI38267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-4]
          Length = 385

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 204/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF G
Sbjct: 13  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQKAYVDALLADLRQDLHLVQGRKLHTIFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S ++EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 73  GGTPSLFDANQIKRILDGANALIPFSDDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 133 QSFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 193 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEDLWQIYEQGQQKLAALGYEQYEISAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L   + N   
Sbjct: 249 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLAADKYN--- 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E+  ++ E +A E+LM  LRL   I  +++E   G + D   E     +++G +    
Sbjct: 306 -FEQTEVAEEDRALEYLMNRLRLMTPIPKQEFENRTGLHRDTLKEGMEKAKQRGLLTE-S 363

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 364 AEHWQLTSKGHMFVNDLLTQFC 385


>gi|16800581|ref|NP_470849.1| coproporphyrinogen III oxidase [Listeria innocua Clip11262]
 gi|16413986|emb|CAC96744.1| hemN [Listeria innocua Clip11262]
          Length = 385

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 196/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMEMTAAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I +   + + +E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIREILPLKNEIEFSFEANPGDLSISKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKVGFENVSIDLIFSLPGQTEADFKDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLTEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENKLPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQDLDTTFAHAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRSGRFLGNNVFQEFL 385


>gi|325918112|ref|ZP_08180267.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325535658|gb|EGD07499.1| coproporphyrinogen III oxidase, anaerobic [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 385

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/390 (34%), Positives = 215/390 (55%), Gaps = 11/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPDLIPPPLSLYVHLPWCVRKCPYCDFNSHAVKGVLPFEEYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL   + I  +L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPAEAIDRLLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H++++A  AI LA++     ++ DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSADAERAIKLAQDAGYDNVNIDLMYALPEQTLLQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    H+S YQLT+E  T+F+         +P ++ A D+    Q++ +  G  
Sbjct: 181 DLERAFALQPTHMSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQALLAEAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+++L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAQQHVLRRWKHKHPQTYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR--NLDIECERNLQRQ 365
                  +   E +  E+   E+++  LRL EG  + D+E   G   +           Q
Sbjct: 298 AGSAAS-IGGDEIVPLERLPFEYMLNLLRLHEGFRLSDFEASTGLAASAIAAPVARAVAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++   Q  R+  T+ G    + V+  L +
Sbjct: 357 GWLIE-QHGRVVPTELGRRFTNDVV-ELFL 384


>gi|329113970|ref|ZP_08242737.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Acetobacter pomorum DM001]
 gi|326696717|gb|EGE48391.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Acetobacter pomorum DM001]
          Length = 384

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 170/384 (44%), Positives = 254/384 (66%), Gaps = 6/384 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            ++L +Y+HWPFC+ KCPYCDFNSHV R ++ Q  F Q+  TE+       G R ++SIF
Sbjct: 3   QDALALYIHWPFCLAKCPYCDFNSHV-RAEIPQARFAQALRTELAHEANRLGRRRLTSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ PQ +A ++D     +  + N+EIT+EANP+SVE    + +R++G+NR+SL
Sbjct: 62  FGGGTPSLMAPQTVASLIDDATSLFDAAPNLEITLEANPTSVEAERLKDFRQSGINRVSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +++L FLGR H+A++A+AA+ LAR++FPR++FDLIYA P Q++  W+ EL+ AL
Sbjct: 122 GIQALNDKALHFLGRQHSATQALAALELARSLFPRITFDLIYARPNQSVAAWKTELETAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               DH+SLYQLTIE GT F  +++ G   LP E  A +LY  T +IT AHGL+AYE+SN
Sbjct: 182 QLVADHVSLYQLTIEPGTKFEALYRQGSFSLPDEETAAELYETTTAITHAHGLNAYEVSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G+ES HNL YW YGDY+G+GPGAH R+ +     A    + PE W ++V + G   
Sbjct: 242 YAKPGSESRHNLTYWHYGDYLGLGPGAHGRITLDGQLYATRRHRAPEPWAELVERTGSGQ 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERV 371
             +E L  +++A E L+MGLRL+EG+++K +E   G      LD         +G++ + 
Sbjct: 302 TSQEPLVPQERAREMLLMGLRLQEGVALKHFEARTGLHLSETLDPVILAAAVEEGYLVQT 361

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + L  T+ G   L++++  L +
Sbjct: 362 -PTHLHATEEGRLRLEALLHALVL 384


>gi|153835258|ref|ZP_01987925.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           harveyi HY01]
 gi|148868233|gb|EDL67373.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           harveyi HY01]
          Length = 390

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    ++  R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLMAYQ 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 ++ E L + E +  EF M   RL E    +D+    G  L    E        G
Sbjct: 300 NMVKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDYIDTTGLPLSSIQETIDWALEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   +    + T++G   L+ ++     
Sbjct: 360 YLSETEA-HWQITEKGKLFLNDLLEAFMA 387


>gi|269965739|ref|ZP_06179836.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           alginolyticus 40B]
 gi|269829607|gb|EEZ83844.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           alginolyticus 40B]
          Length = 392

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    ++  R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++ L     +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFELGHQKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E  ++ E +  EF M   RL E    +D+    G  L    E        G
Sbjct: 300 NMVKPYLHTEHVVADEDRPFEFFMNRFRLIEACPKQDYVDTTGLPLSTIQETINWAIEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     +  + T++G   L+ ++     
Sbjct: 360 YLSET-PTHWQITEKGKLFLNDLLEAFMA 387


>gi|162148169|ref|YP_001602630.1| coproporphyrinogen III oxidase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786746|emb|CAP56329.1| putative oxygen-independent coproporphyrinogen III oxidase-like
           protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 393

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 177/392 (45%), Positives = 238/392 (60%), Gaps = 11/392 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ---LTGPRS 70
             +  L +Y+HWPFC+ KCPYCDFNSHV R  + Q  F  +   E+          GPR 
Sbjct: 3   SDAAPLALYIHWPFCLAKCPYCDFNSHV-RDVIPQARFAAALRRELAQDAARLNADGPRR 61

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + SIFFGGGTPSL++P  +A ++      +T   ++EIT+EANP+SVE    + +R AG+
Sbjct: 62  LGSIFFGGGTPSLMDPATVAALIADATTLFTPLPDLEITLEANPTSVEAGRLRAFRDAGI 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+QSL++ +LR LGR H+A++AI A+ LAR +F R+SFDLIYA P Q++  W  E
Sbjct: 122 NRVSLGIQSLDDDALRLLGREHSATQAIDALDLARGLFDRISFDLIYARPGQSLPAWRAE 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RALS   DHLSLYQLTIE GT F  +H+ G L LP E+ A  LY  T  +   HGL  
Sbjct: 182 LDRALSLVSDHLSLYQLTIEPGTRFEGLHRQGLLALPDEDDAARLYEETAIVAGRHGLMG 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN++  GAES HNL YWRYGDY+GIGPGAHSR+ +     A    + PE W + V +
Sbjct: 242 YEVSNYARPGAESRHNLTYWRYGDYLGIGPGAHSRLTLDGTLHATRRHRAPEPWAERVER 301

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR----NLDIECERNLQRQG 366
            G  V++ E LS+  +A E L+MGLRL EGI    +    G      LD         +G
Sbjct: 302 QGSGVMQDETLSARDRAREMLLMGLRLSEGIPEDRFARRTGMAMADALDPAILAAALEEG 361

Query: 367 FI---ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   E      LR T  G   L++++  L +
Sbjct: 362 YLLRDETTDGPVLRATPSGRLRLEALLGALVL 393


>gi|303258093|ref|ZP_07344101.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
 gi|302859112|gb|EFL82195.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
          Length = 379

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 134/379 (35%), Positives = 208/379 (54%), Gaps = 6/379 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+HWP+C+KKCPYCDFNSH  R    +  +  + +  ++          + SIFFG
Sbjct: 5   PLSLYIHWPWCLKKCPYCDFNSHGLRGPAPEALYEAAIIEGLKEQGARVQRGKLKSIFFG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ I  I++    N     N+EIT+EANP + E   F+ +R+AGVNR+S+G+
Sbjct: 65  GGTPSLMAPETIGRIIEAADNNIPFHENIEITLEANPGTFEEQKFKDFREAGVNRLSIGI 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  LR LGR HN+ EA  A   A  IF   + DL++ LP QT+ + + EL+ A S+
Sbjct: 125 QSFDDAKLRALGRVHNSQEARRAAESAGKIFENFNLDLMFGLPGQTIQELDEELETAFSF 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLT+E  T F K        +P ++V  D+ +L +  T+A G   YE+S ++
Sbjct: 185 GSTHLSCYQLTLEPNTYFAKFPPK---GIPDDDVLSDMSDLVRDKTAARGFDHYEVSAYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNLNYW +GDY  +GPGAH ++ +          + P  WL   +++   + E
Sbjct: 242 KGGYRCRHNLNYWEFGDYFAVGPGAHGKITIQGRPERFYNYRDPARWLLSFKEHQTQIAE 301

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
           ++ +  E    EF++  LRLREG+    +    G + D+       L+ +G +      R
Sbjct: 302 RKLIDPEDLPFEFMLNALRLREGVPFDFYTERTGLDFDVIESIWTELREKGLV-CDHLKR 360

Query: 376 LRCTQRGMTMLDSVIANLA 394
           ++ T++G   L+ V+    
Sbjct: 361 IKTTEKGWLFLNEVLEAFL 379


>gi|47095429|ref|ZP_00233039.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 1/2a F6854]
 gi|254898358|ref|ZP_05258282.1| coproporphyrinogen III oxidase [Listeria monocytogenes J0161]
 gi|254912150|ref|ZP_05262162.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936478|ref|ZP_05268175.1| hemN [Listeria monocytogenes F6900]
 gi|47016250|gb|EAL07173.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258609071|gb|EEW21679.1| hemN [Listeria monocytogenes F6900]
 gi|293590122|gb|EFF98456.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 385

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 195/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTVAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ ++KN     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQKNILPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDATFANAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRNGRFLGNNVFQEFL 385


>gi|134280350|ref|ZP_01767061.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 305]
 gi|134248357|gb|EBA48440.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Burkholderia pseudomallei 305]
          Length = 405

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLDALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA+ +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFNEAHLKALGRIHDAAQARAAVEIAARTFENFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 AFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDASADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G  V
Sbjct: 264 YAKPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GTPV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL +G+    +E   G +L          +++  +     
Sbjct: 323 QEEREVGPRDLPFEFMLNALRLVDGVPAYSFEARTGMSLAAIGPALAQAEQRDLLVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|332162816|ref|YP_004299393.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667046|gb|ADZ43690.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 376

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 213/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDVPLVSGREISTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSAEKLTRLGRIHGPDEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F          LP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  + +  +  EF M   RL E     D+    G     +  + +  L ++  IE  +
Sbjct: 297 DKQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T++G   L+S++  L +
Sbjct: 357 Y--WQITEKGKLFLNSLL-ELFL 376


>gi|313623722|gb|EFR93868.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria innocua FSL J1-023]
          Length = 399

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/397 (27%), Positives = 203/397 (51%), Gaps = 12/397 (3%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           + +     N++ + S+   VY+H PFC   C YCDFN      +   + ++   + EM+ 
Sbjct: 11  ELIKMINTNLSSKESS--AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMEM 67

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                    + ++F GGGTP+ +    IA +   I +   + + +E + EANP  + ++ 
Sbjct: 68  TAAKGPIAPVDTVFVGGGTPTTLNEAQIARLCTAIQEILPLKNEIEFSFEANPGDLSISK 127

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALP 180
            Q  +  GVNRIS+GVQS   + L+ +GR H   +   ++  + +  F  +S DLI++LP
Sbjct: 128 LQAMQNYGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKVGFENVSIDLIFSLP 187

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   ++  L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  
Sbjct: 188 GQTEADFKDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLL 247

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +    HG   YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K 
Sbjct: 248 TEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK- 306

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              +++ ++ N     +++ L+ +++ +E + +GLR  +G++   ++   G++LD     
Sbjct: 307 ---YMEPLQDNKLPTFQQKELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQDLDTTFAH 363

Query: 361 NLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +Q+   +G++E  + + +  T+ G  + ++V     
Sbjct: 364 AIQKTAAKGWLENNEEN-VALTRSGRFLGNNVFQEFL 399


>gi|253990758|ref|YP_003042114.1| coproporphyrinogen III oxidase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211639089|emb|CAR67701.1| Hypothetical protein yggW [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782208|emb|CAQ85372.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 376

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 215/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++   L +++    +   R +++IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVDHLLADLKTDLPMVKGREVTTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  +LDG+     VS+  EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSQGMQQLLDGVRTLLPVSTQAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPDKLVRLGRIHGPDEAKRAARLAASLGLRSFNLDLMHGLPNQSLNEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F         VLP ++   D+++    + +A G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTRFGSRPP----VLPDDDALWDIFSQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTVKTKHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  + +E +  EF M   RL E +  +D+    G    ++    ++ L      E   
Sbjct: 297 DKQNQVENEDRPFEFFMNRFRLLEAMPKQDFSNFTGLSEASIRNPIDQALAANYLSETA- 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + TQ+G   L+S++  L +
Sbjct: 356 -THWQITQKGKLFLNSLL-ELFL 376


>gi|217972512|ref|YP_002357263.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS223]
 gi|217497647|gb|ACK45840.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS223]
          Length = 388

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 204/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF G
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 76  GGTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 135

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 136 QSFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 196 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQKLAALGYEQYEISAY 251

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L       + 
Sbjct: 252 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNY 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E     +++G +    
Sbjct: 308 TFESIDVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTEGMEKAKQRGLLTE-S 366

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 367 TEHWQLTSKGHMFVNDLLTQFC 388


>gi|51891621|ref|YP_074312.1| coproporphyrinogen III oxidase [Symbiobacterium thermophilum IAM
           14863]
 gi|51855310|dbj|BAD39468.1| coproporphyrinogen III oxidase [Symbiobacterium thermophilum IAM
           14863]
          Length = 416

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 128/416 (30%), Positives = 203/416 (48%), Gaps = 40/416 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIF 75
            +G+YVH PFC+ KC YCDFNSH    +  Q +++ + L EM+    R       +S+++
Sbjct: 2   PIGLYVHIPFCLHKCGYCDFNSHAGSDRAEQAHYVDALLREMELWATRPEVAGEQVSTVY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN--NFQGYRKAGVNRI 133
            GGGTP+L+E   +A +L G+ +++ ++ + E+T+E NP +V+V         +AG  R+
Sbjct: 62  VGGGTPTLLEGAELARVLRGVREHFRLAPDAEVTVEGNPGTVDVEGEKLHLAVQAGATRL 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +   L  LGR H+A +  AA+  AR   F  ++ DL+Y LP QT   +   + 
Sbjct: 122 SLGVQARQRHLLERLGRIHDALQVEAAVKAARRAGFANLNLDLMYGLPGQTPADFRETVS 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL     H+S Y L IE+GT FY  +  G L LP E     ++   +++  A G   YE
Sbjct: 182 WALGLGPTHISAYSLIIEEGTPFYHAYLAGRLHLPPEEAEEQMFLEGKALLEAAGFEHYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-------------------------- 286
           +SN +  G    HNL YWR   Y+G+G GAHS +                          
Sbjct: 242 VSNWARPGFRCRHNLIYWRNEHYLGLGCGAHSFLRLAAPLSNLGPPRPGLTASRVQGGSP 301

Query: 287 -----KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                 +   +      KHP ++   + +    V   E +    +  E + MGLRL EG+
Sbjct: 302 VETAPGLPGQQYRFWNLKHPGAYRAALERGVLPVEAGEVVDRRAEMAETMFMGLRLLEGV 361

Query: 342 SVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           S + +E   G ++          L+R+G +E  + + LR T RG+ + + V     
Sbjct: 362 SGERFEARFGVSIADVYGPDVDRLRREGLLEWAEGA-LRLTPRGLRLGNRVWEAFV 416


>gi|226224077|ref|YP_002758184.1| coproporphyrinogen III oxidase [Listeria monocytogenes Clip81459]
 gi|225876539|emb|CAS05248.1| Putative coproporphyrinogen III oxidase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 385

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 196/389 (50%), Gaps = 10/389 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N       S  VY+H PFC   C YCDFN      +   + ++   + EM+         
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIA 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +   
Sbjct: 62  PVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHR 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           VNRIS+GVQS   + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++
Sbjct: 122 VNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQ 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG 
Sbjct: 182 DTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGR 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +
Sbjct: 242 KQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPL 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
           +KN     +++ L+ +++ +E + +GLR  +G+  K ++   G++LD      +Q+   +
Sbjct: 298 QKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAK 357

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++E  + + +  T+ G  + ++V     
Sbjct: 358 GWLENNEEN-VALTRSGRFLGNNVFQEFL 385


>gi|330446893|ref|ZP_08310544.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491084|dbj|GAA05041.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 387

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 133/387 (34%), Positives = 209/387 (54%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSI 71
              L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + + +++      + + G R +
Sbjct: 4   PPPLSLYVHIPWCVQKCPYCDFNSHALKTELPELDYIDALIDDLETDLSAYQLVNGVRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L  I +    S ++EIT+EANP +VE   F  YR+AGVN
Sbjct: 64  HSIFIGGGTPSLISPSEIGRLLKAIEQRIPFSDDIEITMEANPGTVEAGRFDAYRQAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+G+QS + + L  LGR H   EAI A  LA+       + DL++ LP Q++     +
Sbjct: 124 RISIGIQSFQNEKLERLGRIHGCDEAIRAAGLAKQAGLNSFNVDLMHGLPDQSVEDAISD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A++    HLS YQLTIE  TL+Y         LP ++   D++     + +  G   
Sbjct: 184 LKQAIALDPPHLSWYQLTIEPNTLYYSKPP----TLPDDDDLWDIFEQGHQLLTEAGYQQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +L+   
Sbjct: 240 YEISGYSKPGKQCQHNLNYWRFGDYLGIGCGAHGKISFEDGRIIRTVKVKHPRGYLQA-- 297

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
            +   + ++  ++  ++  EF M   RL E    +D+    G  L            Q +
Sbjct: 298 -DKPYLTQETNVADCERPFEFFMNRFRLLEACPKQDYPTRTGLPLSSIEPAIDWAISQNY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++       + T+ G   L+ ++A   
Sbjct: 357 LQDT-GEHWQITEHGKLFLNDLLAAFV 382


>gi|153001559|ref|YP_001367240.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS185]
 gi|151366177|gb|ABS09177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS185]
          Length = 388

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 204/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF G
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AG+ R+S+GV
Sbjct: 76  GGTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGV 135

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 136 QSFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 196 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQKLAALGYEQYEISAY 251

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L       + 
Sbjct: 252 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNY 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E     +++G +    
Sbjct: 308 TFESIEVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTEGMEKAKQRGLLTE-S 366

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 367 AEHWQLTSKGHMFVNDLLTQFC 388


>gi|91228693|ref|ZP_01262607.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
 gi|91187764|gb|EAS74082.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
          Length = 392

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    ++  R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAQLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++ L     +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFELGHQKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E  ++ E +  EF M   RL E    +D+    G  L    E        G
Sbjct: 300 NMVKPYLHTEHVVADEDRPFEFFMNRFRLIEACPKQDYVDTTGLPLSTIQETIDWAIEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     +  + T++G   L+ ++     
Sbjct: 360 YLSETA-THWQITEKGKLFLNDLLEAFMA 387


>gi|83746456|ref|ZP_00943507.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
 gi|83726787|gb|EAP73914.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
          Length = 425

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 217/387 (56%), Gaps = 12/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +E F+ +   +++    +   R + +
Sbjct: 41  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPDQGIPEERFLAAVRQDLEAALPMVWGRRVHT 100

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 101 IFIGGGTPSLLSAQGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 160

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  LR LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 161 SIGIQSFNDAHLRALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 220

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 221 ALSFETSHVSLYHLTLEPNTYFAKYPP----ALPDDDTAFGMQDWIHARLAAAGYEHYEV 276

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     +HPE++L+     G 
Sbjct: 277 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVLREMRHRHPETYLRQAETAGG 336

Query: 314 AVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
           A V  E+  + +     EF++  LRL  G  V  ++   G  L    ER L   +++G +
Sbjct: 337 AAVLQEQREVDAADLPFEFMLNALRLTGGFPVTLFQERTGLPLR-AIERELDAAEQRGLL 395

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     +R T+ G   L+ + A    
Sbjct: 396 AR-DHVAIRPTELGQRFLNDLQALFLA 421


>gi|296160049|ref|ZP_06842869.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
 gi|295889795|gb|EFG69593.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
          Length = 409

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 214/381 (56%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     +  ++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGDTFPENEYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A   F   + DL++ALP QT+ + + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSAQARHAVEVASTTFDNFNLDLMFALPGQTLAECQTDVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP ++ + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDDDASADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV 
Sbjct: 268 AQPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPTTFIEQAKA-GTAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G ++       +  +R+  I R    
Sbjct: 327 EEHEVGTRDLPFEFMLNALRLVEGFPVHRFIERTGMSMTSIEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 386 KIAPTPLGQAFLND-LQELFL 405


>gi|114046764|ref|YP_737314.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-7]
 gi|113888206|gb|ABI42257.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. MR-7]
          Length = 385

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 204/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF G
Sbjct: 13  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQAYVDALLADLRQDLHLVQGRKLHTIFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S ++EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 73  GGTPSLFDANQIKRILDGANALIPFSDDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 133 QSFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 193 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEDLWQIYEQGQQKLAALGYEQYEISAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L     N H 
Sbjct: 249 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLAA--DNYH- 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E+  ++ E +A E+LM  LRL   I  +++E   G + D   E     +++G +    
Sbjct: 306 -FEQTEVAEEDRALEYLMNRLRLMTPIPKQEFEDRTGLHRDTLKEGMEKAKQRGLLTE-S 363

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 364 AEHWQLTSKGHMFVNDLLTQFC 385


>gi|313618877|gb|EFR90746.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria innocua FSL S4-378]
          Length = 385

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 196/379 (51%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMEMTAAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I +   + + +E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIQEILPLKNEIEFSFEANPGDLSISKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKVGFENVSIDLIFSLPGQTEADFKDTLKQALDLD 191

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN + 
Sbjct: 192 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLTEMEKHGRKQYEISNFAK 251

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +++N     ++
Sbjct: 252 EGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQENKLPTFQQ 307

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+   +G++E  + + 
Sbjct: 308 KELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQDLDTTFAHAIQKTTAKGWLENNEEN- 366

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 367 VALTRSGRFLGNNVFQEFL 385


>gi|294667392|ref|ZP_06732610.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602833|gb|EFF46266.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 385

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 143/391 (36%), Positives = 215/391 (54%), Gaps = 12/391 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEEYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPAHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQGLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+S+L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQR 364
                  +   E +  E+   E+++  LRL EG  + D+E   G     ++    R    
Sbjct: 298 AGTAAS-IGGDEIVPGERLPFEYMLNLLRLHEGFRLSDFEASTGLAACAIEAPLARA-VA 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG++ R Q  R+  T+ G    + V+    V
Sbjct: 356 QGWM-RQQDGRVVPTELGRRFTNDVVELFLV 385


>gi|161170275|gb|ABX59245.1| coproporphyrinogen III oxidase-related FeS oxidoreductase
           [uncultured marine bacterium EB000_55B11]
          Length = 384

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 174/381 (45%), Positives = 260/381 (68%), Gaps = 3/381 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC  KCPYCDFNSHVR+  V Q  ++ +   E++     T  R++++IF
Sbjct: 6   NGGFGIYIHWPFCAAKCPYCDFNSHVRK-SVDQSRWLSAXRLELKNXAIRTKGRTVNTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP+ +A I+  IAK W ++ ++EI++EANP+SVE   F  +RKAG+NRIS+
Sbjct: 65  FGGGTPSLMEPEXVAGIIKEIAKLWVLALDIEISLEANPTSVEAQKFSDFRKAGINRISM 124

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL    L+ LGR H+ +EA  A  +A++ F R+SFDLIYA   Q+   WE+ L+ A 
Sbjct: 125 GIQSLRNDDLKALGRMHSVNEARKAFDIAKDNFERVSFDLIYARQDQSKVDWEIXLKEAS 184

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S AVDHLSLYQLTIE GT F  +++ G L  +P++++A D+Y++TQ +T  + + AYEIS
Sbjct: 185 SMAVDHLSLYQLTIEDGTRFGDLYERGSLKGMPNDSLAADMYDITQEVTLQNDMPAYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWRYGDYIG+GPGAH R+    +++A +  ++PE+WL+ V  NG +
Sbjct: 245 NHAIEGAESRHNLIYWRYGDYIGVGPGAHGRISENGNKIATTTIENPENWLRGVELNGTS 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
            ++ E ++   QA E+LMM LRL EG+ ++ ++ ++G  LD +        G I+ +  +
Sbjct: 305 TIDDEVINHIDQASEYLMMSLRLIEGVDMERYKKISGVALDNKLIDKNIENGLIKVINNN 364

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            L  TQ G  +L+++I +L +
Sbjct: 365 -LIATQXGRIILNTLIKDLLI 384


>gi|51597528|ref|YP_071719.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|149367045|ref|ZP_01889078.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis CA88-4125]
 gi|153949486|ref|YP_001399809.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|162420837|ref|YP_001604773.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|165937288|ref|ZP_02225852.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010233|ref|ZP_02231131.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212704|ref|ZP_02238739.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167426718|ref|ZP_02318471.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468165|ref|ZP_02332869.1| coproporphyrinogen III oxidase [Yersinia pestis FV-1]
 gi|170023075|ref|YP_001719580.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|218928118|ref|YP_002345993.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229837639|ref|ZP_04457801.1| predicted oxidoreductase [Yersinia pestis Pestoides A]
 gi|229840865|ref|ZP_04461024.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842574|ref|ZP_04462729.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903766|ref|ZP_04518879.1| predicted oxidoreductase [Yersinia pestis Nepal516]
 gi|270487544|ref|ZP_06204618.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis KIM D27]
 gi|294502891|ref|YP_003566953.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|51590810|emb|CAH22456.1| Putative conserved coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|115346729|emb|CAL19612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis CO92]
 gi|149290659|gb|EDM40735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis CA88-4125]
 gi|152960981|gb|ABS48442.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pseudotuberculosis IP 31758]
 gi|162353652|gb|ABX87600.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis Angola]
 gi|165914762|gb|EDR33375.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165990719|gb|EDR43020.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205996|gb|EDR50476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167054321|gb|EDR64140.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169749609|gb|ACA67127.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis YPIII]
 gi|229679536|gb|EEO75639.1| predicted oxidoreductase [Yersinia pestis Nepal516]
 gi|229690884|gb|EEO82938.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697231|gb|EEO87278.1| predicted oxidoreductase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704327|gb|EEO91338.1| predicted oxidoreductase [Yersinia pestis Pestoides A]
 gi|262360926|gb|ACY57647.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|270336048|gb|EFA46825.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis KIM D27]
 gi|294353350|gb|ADE63691.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|320013972|gb|ADV97543.1| putative oxidoreductase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 376

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 136/383 (35%), Positives = 216/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHVLADLDADVPLVSGREISTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V+S+ EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPVASDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSAQKLTRLGRIHGPDEARRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F         +LP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLLSAAGYLQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFNDGRILRTIKTKHPRGFMQ-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  +++  +  EF M   RL E     D+    G     +  + +  + ++  IE  +
Sbjct: 297 DKQYEVAAVDRPFEFFMNRFRLLEAAPRADFYHFTGLTESTIRPQLDEAIAKEYLIETTE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T++G   L+S++  L +
Sbjct: 357 Y--WQITEKGKLFLNSLL-ELFL 376


>gi|166713275|ref|ZP_02244482.1| coproporphyrinogen III oxidase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 385

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 140/391 (35%), Positives = 219/391 (56%), Gaps = 13/391 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGVLPFEEYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  P+ I   L   +     + N+E+T+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPEAIDRFLQAASARLRFAPNLEMTLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H++++A  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSADAERAIKLAQDAGYDNFNIDLMYALPEQTLLQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQRLLANAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+S+L  
Sbjct: 238 QYEVSAYARPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQR 364
                  +   E +  E+   E+++  LRL EG  + D+E   G     +++   R L  
Sbjct: 298 AGTAAS-IGGDEIVPRERLPFEYMLNLLRLHEGFRLNDFEASTGLAASVIEVPLARAL-A 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG++ R Q +R+  T+ G    + V+  L +
Sbjct: 356 QGWMSR-QDARVVPTELGRRFTNDVV-ELFL 384


>gi|251788392|ref|YP_003003113.1| coproporphyrinogen III oxidase [Dickeya zeae Ech1591]
 gi|247537013|gb|ACT05634.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya zeae
           Ech1591]
          Length = 379

 Score =  371 bits (953), Expect = e-101,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     L   R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLPLASGRPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++   EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPLAPEAEITMEANPGTVEADRFSGYQQAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A++
Sbjct: 126 QSFSPDKLTRLGRIHGPEEAKRAAALAAALGLRSFNLDLMHGLPEQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + S  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHRLLSDAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      +  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYQCRHNLNYWRFGDYLGIGCGAHGKLTFADGNIVRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
            ++  +   ++  EF M   RL E     D+    G        +      QG++     
Sbjct: 297 QQRSEVEKAERPFEFFMNRFRLLEPAPRADFTAYTGLPESTVRAQIDAALAQGYLTETA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QHWQVTEHGKLFLNSLL-ELFL 376


>gi|319427159|gb|ADV55233.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           putrefaciens 200]
          Length = 387

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 205/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R + +IF G
Sbjct: 15  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLAQGRQVHTIFIG 74

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + I  IL+G       S N+EIT+EANP ++E ++F  YR AG+ R+S+GV
Sbjct: 75  GGTPSLFDAKQIKRILEGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGV 134

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A    +   + DL++ LP Q+  +   ++  A +
Sbjct: 135 QSFAKDKLNLLGRIHDQNEAKIAAQKASQAKYLSFNLDLMHGLPNQSFDEAMADIDTAAA 194

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 195 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQRLAALGYEQYEISAY 250

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L     +   
Sbjct: 251 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEQNRIIRTVKIKHPKGYL----SSNQY 306

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
            VE   ++ E +A E+LM  LRL   I  +++E   G + +   E     +++G +    
Sbjct: 307 TVELTEVAEEDRALEYLMNRLRLMTPIPKQEFEQRTGLHRETLSEGMEKAKQRGLLTE-S 365

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 366 AEYWQLTPKGHMFVNDLLTQFC 387


>gi|330899343|gb|EGH30762.1| HemN family oxidoreductase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 404

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|186896652|ref|YP_001873764.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|186699678|gb|ACC90307.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis PB1/+]
          Length = 376

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/383 (35%), Positives = 216/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHVLADLDADVPLVSGREISTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V+S+ EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPVASDTEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSAQKLTRLGRIHGPDEARRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F         +LP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLLSAAGYLQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFNDGRILRTIKTKHPRGFMQ-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  +++  +  EF M   RL E     D+    G     +  + +  + ++  IE  +
Sbjct: 297 DKQYEVAAVDRPFEFFMNRFRLLEAAPRADFYHFTGLTESTIRPQLDEAIAKEYLIETTE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T++G   L+S++  L +
Sbjct: 357 Y--WQITEKGKLFLNSLL-ELFL 376


>gi|146309173|ref|YP_001189638.1| coproporphyrinogen III oxidase [Pseudomonas mendocina ymp]
 gi|145577374|gb|ABP86906.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas mendocina
           ymp]
          Length = 386

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 129/380 (33%), Positives = 216/380 (56%), Gaps = 10/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++    +    R ++SIFFG
Sbjct: 13  PLALYIHIPWCVRKCPYCDFNSHAAGPTLPEEEYVDALLADLDANLRHVHGRPLTSIFFG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    + ++EIT+EANP + E   F+GYR  G+NR+S+GV
Sbjct: 73  GGTPSLFSDRALGRLLEGVERRVAFAPDIEITLEANPGTFEQAKFKGYRALGINRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR H+ +EA+ A  +AR   F   + DL++ LP+Q++     +L+ A+S
Sbjct: 133 QSFQEAKLKALGRIHDGNEAVRAADMARAAGFDNFNLDLMHGLPEQSIEDALFDLRTAIS 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+        VLP +++  D+    Q++ +A G   YE+S +
Sbjct: 193 QGPTHLSWYQLTMEPNTVFWSQPP----VLPEDDLLWDIQEAGQALLAAEGYAQYEVSAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G ++ HNLNYW +GD++GIG GAH+++     R+  S + + P+ +L   +      
Sbjct: 249 AQTGKQARHNLNYWTFGDFLGIGAGAHAKLSAPDGRILRSWKTRLPKDYLDPAK---VFQ 305

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG-FIERVQFS 374
             +  L +++   EFLM  LRL +G+  + +    G  L        + +G  + R +  
Sbjct: 306 AGERVLGADELPFEFLMNVLRLTDGVPARLFSERTGLPLASLDAARAEAEGRKLLRAEPE 365

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T  G   L+ ++ +  
Sbjct: 366 RLCATAEGQLFLNDLLQHFL 385


>gi|294634377|ref|ZP_06712914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Edwardsiella tarda ATCC 23685]
 gi|291092185|gb|EFE24746.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Edwardsiella tarda ATCC 23685]
          Length = 376

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 214/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++ Q+ ++   L ++         R++S++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPQQAYVDHLLADLDQELPRVAGRTLSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +LDG+     ++++ EIT+EANP +VE   F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLFSGEALQRLLDGVRARLPLAADAEITMEANPGTVEAERFSAYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EAIAA  LA ++  R  + DL++ LP+Q+  +   +L++A++
Sbjct: 126 QSFSADKLQRLGRIHGPQEAIAAAQLASSLGLRSFNLDLMHGLPQQSQQEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   +++     +  A+G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----RLPDDDALWEIFEQGDRLLRANGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G+ +
Sbjct: 242 ALAGRQCQHNLNYWRFGDYLGIGCGAHGKLTFVDGRIERRAKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            +++ ++   +  EF M   RL E     D+    G +   +  + E  L  QG+I    
Sbjct: 297 DQQQQVTLADRPFEFFMNRFRLLEPAPRADFTAYTGVDEATIRPQLEAAL-AQGYISE-S 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S  + T  G   L+S++  L +
Sbjct: 355 PSHWQITPHGKLFLNSLL-ELFL 376


>gi|116872907|ref|YP_849688.1| coproporphyrinogen III oxidase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741785|emb|CAK20909.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 385

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 198/389 (50%), Gaps = 10/389 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           NM    + S  VY+H PFC   C YCDFN      +   + ++   + EM+         
Sbjct: 3   NMNQSSNESSAVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIA 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  G
Sbjct: 62  PVDTVFVGGGTPTTLNEAQIARLCTAIQDILPLKKDIEFSFEANPGDLSLSKVQTMQDHG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           VNRIS+GVQS   + L+ +GR H   +   ++  + +  F  +S DLI++LP Q    ++
Sbjct: 122 VNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQKEADFK 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++A+   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    +  
Sbjct: 182 DTLKQAIDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKNNR 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G +S HN+ YW    Y G G GAH  +    +     I+K    +++ +
Sbjct: 242 KQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYIGDTRYSNFGPIKK----YMEPL 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
           ++N     +++ L+ +++ +E + +GLR  +G++   ++   G+NLD    + +++   +
Sbjct: 298 QENQLPTFQQKELTLKEKMEEEMFLGLRKVDGVNKIHFKQKFGQNLDTTFAKAIEKTTAK 357

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++E  Q + +  T+ G  + ++V     
Sbjct: 358 GWLENNQEN-VALTRSGRFLGNNVFQEFL 385


>gi|318604343|emb|CBY25841.1| radical SAM family enzyme, similar to coproporphyrinogen III
           oxidase, oxygen-independent,clustered with
           nucleoside-triphosphatase RdgB [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 376

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 213/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDVPLVSGREISTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSAEKLTRLGRIHGPYEAKRAAELATSLELRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F          LP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  + +  +  EF M   RL E     D+    G     +  + +  L ++  IE  +
Sbjct: 297 DKQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T++G   L+S++  L +
Sbjct: 357 Y--WQITEKGKLFLNSLL-ELFL 376


>gi|330961992|gb|EGH62252.1| HemN family oxidoreductase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 404

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 210/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     + L+L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGLLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHE-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 ARLVATPQGQLFLNDLLQYFLI 404


>gi|160876295|ref|YP_001555611.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS195]
 gi|160861817|gb|ABX50351.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS195]
 gi|315268484|gb|ADT95337.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS678]
          Length = 388

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 203/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q  ++ + L +++    L   R I +IF G
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQAAYVDALLEDLRQDLHLVQGRQIHTIFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 76  GGTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 135

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 136 QSFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 196 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQKLAALGYEQYEISAY 251

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L       + 
Sbjct: 252 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLSA----SNY 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E     +++G +    
Sbjct: 308 TFESIDVAEEDRALEYLMNRLRLMTPIPKQEFELRTGQHRDTLTEGMEKAKQRGLLTE-S 366

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 367 AEHWQLTSKGHMFVNDLLTQFC 388


>gi|330951370|gb|EGH51630.1| HemN family oxidoreductase [Pseudomonas syringae Cit 7]
 gi|330984663|gb|EGH82766.1| HemN family oxidoreductase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 404

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|66043738|ref|YP_233579.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254445|gb|AAY35541.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas syringae pv. syringae B728a]
          Length = 404

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 211/382 (55%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARRAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIVRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|319761727|ref|YP_004125664.1| oxygen-independent coproporphyrinogen iii oxidase [Alicycliphilus
           denitrificans BC]
 gi|317116288|gb|ADU98776.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans BC]
          Length = 411

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 11/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +YVH P+C++KCPYCDFNSH        + +  +  + + +++    L   R++ SI
Sbjct: 34  PLSLYVHLPWCLRKCPYCDFNSHQAPGGSEALPEARYTAALVADLEAALPLVWGRTVHSI 93

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL  P+ +  +L  I     + +  E+T+EANP + E   F+ YR AGV R+S
Sbjct: 94  FIGGGTPSLFSPEAMDRLLGDIRARLPLDAGCEVTLEANPGTFEKERFRAYRGAGVTRLS 153

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQS  ++ L+ LGR H+ ++A+AA+  A   F   + D++YALP QT  + E ++++A
Sbjct: 154 IGVQSFNDRHLQALGRVHDRAQALAAVEEAAQAFETFNLDIMYALPGQTPAEQEQDMRQA 213

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ A  H+S+Y LTIE  T F K        LP ++ A  + +    +T+A GL  YE+S
Sbjct: 214 LALAPPHISIYHLTIEPNTYFAKYPP----RLPEDDQAYAMLDRITELTAAAGLSRYEVS 269

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++  G +  HN NYW++GDY+GIG GAHS++      V     + P+ ++      G A
Sbjct: 270 AYAREGHQCQHNRNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRLRDPQLYMTGALA-GRA 328

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQ 372
           + + E +       EF++  LRLREG +++D+    G+ L       +  + +G I R  
Sbjct: 329 IAQDEDVRRADLPFEFMLNALRLREGFALQDFTERTGQPLTAIAQGLQQAEARGLIAR-D 387

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              +R T+RG   L  + A   
Sbjct: 388 MGHVRPTERGFDFLSDLQALFL 409


>gi|22127208|ref|NP_670631.1| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|45443234|ref|NP_994773.1| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806316|ref|YP_650232.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108813303|ref|YP_649070.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145597876|ref|YP_001161952.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|165924952|ref|ZP_02220784.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|167399879|ref|ZP_02305397.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422016|ref|ZP_02313769.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|21960275|gb|AAM86882.1|AE013934_5 putative oxidase [Yersinia pestis KIM 10]
 gi|45438102|gb|AAS63650.1| putative oxidase [Yersinia pestis biovar Microtus str. 91001]
 gi|108776951|gb|ABG19470.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108778229|gb|ABG12287.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|145209572|gb|ABP38979.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|165923152|gb|EDR40303.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166960153|gb|EDR56174.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167050587|gb|EDR61995.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
          Length = 380

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/383 (35%), Positives = 216/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF G
Sbjct: 10  PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVEHVLADLDADVPLVSGREISTIFIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V+S+ EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 70  GGTPSLLSAEAMQQLLDGVRARLPVASDAEITMEANPGAVEADRFSGYQRAGINRISIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++
Sbjct: 130 QSFSAQKLTRLGRIHGPDEARRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  T F         +LP ++   D++     + SA G   YE S +
Sbjct: 190 LNPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWDIFQQGHQLLSAAGYLQYETSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 246 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFNDGRILRTIKTKHPRGFMQ-----GKYL 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  +++  +  EF M   RL E     D+    G     +  + +  + ++  IE  +
Sbjct: 301 DKQYEVAAVDRPFEFFMNRFRLLEAAPRADFYHFTGLTESTIRPQLDEAIAKEYLIETTE 360

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T++G   L+S++  L +
Sbjct: 361 Y--WQITEKGKLFLNSLL-ELFL 380


>gi|117919637|ref|YP_868829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. ANA-3]
 gi|117611969|gb|ABK47423.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. ANA-3]
          Length = 385

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 204/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF G
Sbjct: 13  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQKAYVDTLLADLRQDLHLVQGRKLHTIFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S ++EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 73  GGTPSLFDANQIKRILDGANALIPFSDDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 133 QSFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 193 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEDLWQIYEQGQQKLAALGYEQYEISAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L     N H 
Sbjct: 249 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLAA--DNYH- 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
             E+  ++ E +A E+LM  LRL   I  +++E   G + D   E     +++G +    
Sbjct: 306 -FEQTEVAEEDRALEYLMNRLRLMTPIPKQEFEDRTGLHRDSLKEGMEKAKQRGLLTE-S 363

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 364 AEHWQLTSKGHMFVNDLLTQFC 385


>gi|24374870|ref|NP_718913.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella oneidensis MR-1]
 gi|24349568|gb|AAN56357.1|AE015773_2 oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella oneidensis MR-1]
          Length = 385

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 203/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++    L   R + +IF G
Sbjct: 13  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQAYVDALLADLRQDLHLVQGRKLHTIFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILD        S  +EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 73  GGTPSLFDANQIKRILDDANALIPFSDGIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   AR   +   + DL++ LP Q+  +   ++  A S
Sbjct: 133 QSFSKDKLNLLGRIHDQNEAQTAAQKARQADYLSFNLDLMHGLPNQSFEEAMADIDTAAS 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 193 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEDLWQIYEQGQQKLAALGYEQYEISAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L       + 
Sbjct: 249 AKPGYQCQHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTVKIKHPKGYLTA----DNY 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
             E+  ++ E +A E+LM  LRL   I  +++E   G   D+  +     +++G +    
Sbjct: 305 TFEQTEVAQEDRALEYLMNRLRLMTPIPKQEFEDRTGLPRDVLKDGMEKAKQRGLLTE-S 363

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 364 AEHWQLTNKGHMFVNDLLTQFC 385


>gi|293391741|ref|ZP_06636075.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952275|gb|EFE02394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 389

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/385 (35%), Positives = 213/385 (55%), Gaps = 18/385 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + +++++Q  L ++       ++    R + S
Sbjct: 13  PLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEQDYVQHLLADLTADLARYQESVQQRPLHS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL     IA +L  I +    + N+EIT+E NP +VE   F+GY +AGVNRI
Sbjct: 73  IFIGGGTPSLFSSDTIAYLLAQIEQRIPFAPNIEITLETNPGTVEAARFRGYVQAGVNRI 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  ++ L+ LGR HNA EA +A+  A  +     + DL++ LP QT+ +   +L+
Sbjct: 133 SMGIQSFSDEKLQKLGRIHNAEEAKSAVGFAGVSHLRSFNLDLMHGLPNQTLNEALDDLR 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++ A  HLS YQLTIE  T+F         +LP ++   D++     + +A G   YE
Sbjct: 193 QAIALAPPHLSWYQLTIEPNTMFAYRPP----MLPDDDELWDIFEQGHQLLTAAGYQQYE 248

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++     
Sbjct: 249 TSAYAKAGFQCQHNLNYWRFGDYLAIGCGAHGKLSFPNGNILRYSKTKHPKGYMR----- 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
           G  + E+  +S+E +  EF M   RL E +   D+E L G  L          Q Q FI 
Sbjct: 304 GEYLYEERLVSAEDRPFEFFMNRFRLLEPVPKSDFEQLTGLPLSAVENAIVWAQEQKFIT 363

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
               +  + T+ G   L+ ++    
Sbjct: 364 ETDRT-WQITEHGKLFLNELLERFL 387


>gi|21244125|ref|NP_643707.1| coproporphyrinogen III oxidase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109754|gb|AAM38243.1| oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 385

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/391 (36%), Positives = 216/391 (55%), Gaps = 12/391 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEAYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPAHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQGLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G  +H +     KHP+S+L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEAHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQR 364
                  +   E +  E+   E+++  LRL EG  + D+E   G     ++    R    
Sbjct: 298 AGTAAS-IGGDEIVPGERLPFEYMLNLLRLHEGFRLSDFEASTGLAACAIEAPLARA-VA 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G++ R Q  R+  T+ G    + V+    V
Sbjct: 356 KGWM-RQQDGRVVPTELGRRFTNDVVELFLV 385


>gi|312795399|ref|YP_004028321.1| Oxygen-independent coproporphyrinogen-III oxidase [Burkholderia
           rhizoxinica HKI 454]
 gi|312167174|emb|CBW74177.1| Oxygen-independent coproporphyrinogen-III oxidase (EC 1.3.99.22)
           [Burkholderia rhizoxinica HKI 454]
          Length = 426

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 127/384 (33%), Positives = 205/384 (53%), Gaps = 13/384 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +YVH+P+CV KCPYCDFNSH         +  +  ++ +   +++    L   R + 
Sbjct: 45  PLSLYVHFPWCVHKCPYCDFNSHAFTRGPNDAQFPETEYLDALRADLEAALPLIWGRPVH 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPSL+  Q I  +L  +     + ++ EIT+EANP + E   F  +R +G+NR
Sbjct: 105 TVFIGGGTPSLLSAQAIDRLLSDLRALLPLDADAEITLEANPGTFEAAKFASFRSSGINR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+G+QS  +  L+ LGR H+A++A  A+ +A + F   + DL++ALP Q + Q + +++
Sbjct: 165 LSIGIQSFNDAHLQALGRIHDAAQARRAVEIAHSSFDNFNLDLMFALPGQRLAQCQADVE 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ALS+A  HLSLY LT+E  T F+K        LP ++ + D+     + T   G + YE
Sbjct: 225 TALSFAPPHLSLYHLTLEPNTYFHKYPP----ALPDDDTSADMQEWIHARTHEAGYNRYE 280

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +S ++    +S HNLNYW++GDY+GIG GAHS++      V     KHP ++L      G
Sbjct: 281 VSAYARTHRQSRHNLNYWQFGDYLGIGAGAHSKLSFPERIVRQMRYKHPATYLAQTAA-G 339

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIER 370
             + E+  +       EF++  LRL +G  V  +    G  +          +R+G I R
Sbjct: 340 APIQEQHEVGVRDLPFEFMLNALRLTQGFPVHRFIERTGLTMTSIEPALAQAERRGLIRR 399

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
              + +  T  G   L+ + A   
Sbjct: 400 -DHASIAPTPLGQRFLNDLQALFL 422


>gi|330886249|gb|EGH20150.1| HemN family oxidoreductase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 404

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFNNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGAKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|297199599|ref|ZP_06916996.1| coproporphyrinogen III oxidase [Streptomyces sviceus ATCC 29083]
 gi|197713473|gb|EDY57507.1| coproporphyrinogen III oxidase [Streptomyces sviceus ATCC 29083]
          Length = 420

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 118/400 (29%), Positives = 196/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++
Sbjct: 29  ASALAGSADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYAETLIDEIR 88

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++++ E+T EANP SV+
Sbjct: 89  LARKVLGDDPRPVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAADAEVTTEANPESVD 148

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 149 PEYLAALREGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFAHVNLDLIY 208

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y 
Sbjct: 209 GTPGESDDDWRASLEAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDEHADRYL 268

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +  S+ +  G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 269 IADSMLAEAGFDWYEVSNWATSEAARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 324

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +         +E L  E +  E +++ LRLREG+ +            +
Sbjct: 325 NVKHPGAYAAALASGRSPGAGRELLPEEDRRVERILLELRLREGVPLSLLREEG-----L 379

Query: 357 ECERNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
              R    +G +E    +  R   T RG  + D+V+ +L 
Sbjct: 380 AASRRALGEGLLEGGPYEEGRAVLTLRGRLLADAVVRDLV 419


>gi|328474074|gb|EGF44879.1| HemN family oxidoreductase [Vibrio parahaemolyticus 10329]
          Length = 392

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 206/389 (52%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    +   R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYISALLEDLDTDIDKYRLNDAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI        ++EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPDIEITMEANPGTIEAERFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A  L   I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQEKLERLGRIHGQDEAVNAAKLTHQIGLNSFNLDLMHGLPDQSIKQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++       +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFEQGHEKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E L + E +  EF M   RL E    +D+    G  L    +        G
Sbjct: 300 NMVKPYLHTEQLVADEDRPFEFFMNRFRLMEACPKQDYVDTTGLPLSTIQDTIDWALEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   + +  + T++G   L+ ++     
Sbjct: 360 YLSETE-THWQITEKGKLFLNDLLEAFMA 387


>gi|110677822|ref|YP_680829.1| coproporphyrinogen III oxidase [Roseobacter denitrificans OCh 114]
 gi|109453938|gb|ABG30143.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Roseobacter denitrificans OCh 114]
          Length = 385

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 179/380 (47%), Positives = 246/380 (64%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWP+C  KCPYCDFNSHV R ++ Q  +  ++LTE++   + T  R + S+F
Sbjct: 7   HGGFGLYIHWPYCEAKCPYCDFNSHVVR-RIDQTAWRDAYLTELRRTARETQGRVLRSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  +A+++  + K W V++++EIT+EANPSSVE   F  +R+ GV RIS+
Sbjct: 66  FGGGTPSLMDPDTVAVVISEVRKLWPVANDLEITLEANPSSVEAGRFAAFRQGGVTRISM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  LR LGR H  +EA  A  +AR+ F R+SFDLIYA   Q++  WE EL++AL
Sbjct: 126 GIQALNDDDLRRLGRIHTVTEAQTAFDIARSEFDRVSFDLIYARQGQSLHAWEQELKQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             AVDHLSLYQLTIE+GT F   +  G L  LP E+++ DLY LTQ +  A G+  YE+S
Sbjct: 186 EMAVDHLSLYQLTIEQGTAFGDRYNAGKLRGLPDEDLSADLYTLTQDLCGAAGMPGYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GA S HNL YWRYGDY+GIGPGAH R+ V   R A     +P  WL  V  + H 
Sbjct: 246 NHARDGAHSRHNLIYWRYGDYLGIGPGAHGRLTVNGQRYATECYSNPAKWLAAV-GDEHT 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L+ + QA EFL+MGLRL+EGI    +E LAG+ LD      L   G +   +  
Sbjct: 305 EKPRGPLTYQDQASEFLLMGLRLKEGIDTHRYETLAGKALDSHAVSELADLGMVSTTE-D 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  + +G  +L++VIA L 
Sbjct: 364 RITVSDQGFIILNAVIARLL 383


>gi|209542808|ref|YP_002275037.1| coproporphyrinogen III oxidase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530485|gb|ACI50422.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 393

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 177/392 (45%), Positives = 239/392 (60%), Gaps = 11/392 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ---LTGPRS 70
             +  L +Y+HWPFC+ KCPYCDFNSHV R  + Q  F  +   E+          GPR 
Sbjct: 3   SDAAPLALYIHWPFCLAKCPYCDFNSHV-RDVIPQARFAAALRRELAQDAARLNADGPRR 61

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + SIFFGGGTPSL++P  +A ++      +T   ++EIT+EANP+SVE    + +R AG+
Sbjct: 62  LGSIFFGGGTPSLMDPATVAALIADATTLFTPLPDLEITLEANPTSVEAGRLRAFRDAGI 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+QSL++ +LR LGR H+A++AI A+ LAR +F R+SFDLIYA P Q++  W  E
Sbjct: 122 NRVSLGIQSLDDDALRLLGREHSATQAIDALDLARGLFDRISFDLIYARPGQSLPAWRAE 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RALS   DHLSLYQLTIE GT F  +H+ G L LP E+ A  LY  T  +   HGL  
Sbjct: 182 LDRALSLVSDHLSLYQLTIEPGTRFEGLHRQGLLALPDEDDAARLYEETAIVAGRHGLMG 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN++  GAES HNL YWRYGDY+GIGPGAHSR+ +     A    + PE W + V +
Sbjct: 242 YEVSNYARPGAESRHNLTYWRYGDYLGIGPGAHSRLTLDGTLHATRRHRAPEPWAERVER 301

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR----NLDIECERNLQRQG 366
            G  V++ E LS+  +A E L+MGLRL EGI+   +    G      LD         +G
Sbjct: 302 QGSGVMQDETLSARDRAREMLLMGLRLSEGITEDRFARRTGMAMADALDPAILAAALEEG 361

Query: 367 FI---ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   E      LR T  G   L++++  L +
Sbjct: 362 YLLRDETTDGPVLRATPSGRLRLEALLGALVL 393


>gi|289625042|ref|ZP_06457996.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647869|ref|ZP_06479212.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330865789|gb|EGH00498.1| HemN family oxidoreductase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 404

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQHLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|86146419|ref|ZP_01064743.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|85835898|gb|EAQ54032.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
          Length = 395

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/389 (35%), Positives = 210/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L +    ++  +    PR +
Sbjct: 8   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEKEYIDALLEDLDTDIEKYQLNDAPRPL 67

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAGV+
Sbjct: 68  HSIFIGGGTPSLFSPEGIGRLLQGIKQRIPFKPEIEITMEANPGTIEAERFAGYQKAGVS 127

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +
Sbjct: 128 RISVGVQSFEQEKLERLGRIHGQDEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALAD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  T+FY         LP ++   D+++L     +  G   
Sbjct: 188 LDKAIELDPPHLSWYQLTIEPNTMFY----YKTPKLPDDDDLWDIFDLGHKKLADAGYVQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 244 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQ 303

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E  + +E +  EF M   RL E    +D+    G   D   E     +  G
Sbjct: 304 NLVKPYLSDELEVPNEDRPFEFFMNRFRLMEACPKQDFIDTTGLGFDSIQETIEWAKELG 363

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     S  + T++G   L+ ++     
Sbjct: 364 YLNET-NSHWQITEKGKLFLNDLLEAFMA 391


>gi|71735003|ref|YP_272765.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555556|gb|AAZ34767.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 404

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAHS++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHSKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGAKLLPLDELPFEFLMNALRLTNGVDAALFRKRTGLSLDSLTEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|315127649|ref|YP_004069652.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas sp. SM9913]
 gi|315016163|gb|ADT69501.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas sp. SM9913]
          Length = 378

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 198/383 (51%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH ++  + +  ++Q  + +++    L   R I SIF G
Sbjct: 5   PLSLYVHVPWCVQKCPYCDFNSHGQKGDIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +L  +     +S N EIT+EANP +VE   F+ Y KAG+NRIS+GV
Sbjct: 65  GGTPSLLTGAAYTRLLKEVDSLIGLSDNCEITLEANPGTVETGRFKDYVKAGINRISIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS++   L+ LGR H A EA  A   A        + DL++ LP Q++     +L++ ++
Sbjct: 125 QSMQNDKLKALGRIHGADEASYAAQQASEAGLNSFNLDLMHGLPGQSLDDALSDLKQIIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T F          LP +    D+    Q++ +  G   YEIS +
Sbjct: 185 LNPPHISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGQALLAQAGYQQYEISGY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH +V      V    E  KHP  ++ +++     
Sbjct: 241 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTDAKTGVITRTEKVKHPRGYMDIIK---PY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           + +   +  +  A EF M   RL E   + D+  L  + L  +          G + +  
Sbjct: 298 LYKSWQVEQDDLAFEFFMNRFRLIEPCPINDFNALTQQPLQSQQHALDKAINAGLLTKTD 357

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S    T +G   L+ ++A L V
Sbjct: 358 -SHWHVTLQGQRFLNDLLA-LFV 378


>gi|312963629|ref|ZP_07778110.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas fluorescens WH6]
 gi|311282138|gb|EFQ60738.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas fluorescens WH6]
          Length = 400

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 135/381 (35%), Positives = 212/381 (55%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +E ++ + L ++         R +SSIFFG
Sbjct: 27  PLALYIHIPWCVRKCPYCDFNSHTASQVLPEEEYVDALLDDLDQDLHAVYGRELSSIFFG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+      + ++EIT+EANP + E   F  YRK G+NR+S+GV
Sbjct: 87  GGTPSLFSAAALGRLLKGVEARIPFAGDIEITLEANPGTFEQEKFVAYRKLGINRLSIGV 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR HN  EA+ A  +AR   F   + DL++ LP Q++     +L++A++
Sbjct: 147 QSFQQEKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPNQSLDDALSDLRQAIA 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T+F+        VLP ++   D+    Q++ + HG   YE+S +
Sbjct: 207 LKPTHLSWYQLTLEPNTVFWNQPP----VLPEDDTLWDIQEAGQALLAEHGYRQYEVSAY 262

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L   +      
Sbjct: 263 AQPGRPARHNLNYWSFGDFIGIGAGAHGKLSHPDGRIVRTWKTRAPKDYLNPAKPFQAGA 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQF 373
            E   L++E+   EFLM  LRL EG+  + +    G +     E  R  ++ G + +V+ 
Sbjct: 323 KE---LTNEELPFEFLMNALRLTEGVEARLYAERTGLDQASLAEGRREAEQSGLM-QVEP 378

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           SRL  T RG   L+ ++    
Sbjct: 379 SRLAATDRGQLFLNDLLQTFL 399


>gi|168264450|ref|ZP_02686423.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168819866|ref|ZP_02831866.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205343497|gb|EDZ30261.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205347072|gb|EDZ33703.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|322613501|gb|EFY10442.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621093|gb|EFY17951.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624157|gb|EFY20991.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628104|gb|EFY24893.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633223|gb|EFY29965.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636199|gb|EFY32907.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639537|gb|EFY36225.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647530|gb|EFY44019.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648714|gb|EFY45161.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653769|gb|EFY50095.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657875|gb|EFY54143.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663978|gb|EFY60177.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669011|gb|EFY65162.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672995|gb|EFY69102.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678014|gb|EFY74077.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681190|gb|EFY77223.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687880|gb|EFY83847.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194924|gb|EFZ80111.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199628|gb|EFZ84718.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202625|gb|EFZ87665.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207888|gb|EFZ92834.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212560|gb|EFZ97377.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214957|gb|EFZ99705.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222687|gb|EGA07052.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225430|gb|EGA09662.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230555|gb|EGA14673.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235094|gb|EGA19180.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239133|gb|EGA23183.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244509|gb|EGA28515.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247124|gb|EGA31090.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253393|gb|EGA37222.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256300|gb|EGA40036.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262524|gb|EGA46080.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267380|gb|EGA50864.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269216|gb|EGA52671.1| HemN family oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 378

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|194443015|ref|YP_002042363.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194401678|gb|ACF61900.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 378

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLRDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVETDRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVAYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|294627119|ref|ZP_06705707.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598552|gb|EFF42701.1| coproporphyrinogen III oxidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 385

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 142/390 (36%), Positives = 213/390 (54%), Gaps = 10/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +  +  E ++ + + ++     L   R 
Sbjct: 1   MPQLIPPPLSLYVHLPWCVRKCPYCDFNSHAAKGALPFEEYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  PQ I   L   A     + N+EIT+E NP + E   F+ YR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPQAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFEHYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQTFDDVALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLMQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +  G  
Sbjct: 181 DLERAFALQPAHLSHYQLTLEPNTVFFARPPK---GIPDDDAAWDIQEHCQGLLADAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G   H +     KHP+S+L  
Sbjct: 238 QYEVSAYAKPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEEHVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQ 365
                  +   E +  E+ + E+++  LRL EG  + D+E   G               Q
Sbjct: 298 AGTAAS-IGGDEIVPGERLSFEYMLNLLRLHEGFRLSDFEASTGLAACAIKAPLARAVAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++ R Q  R+  T+ G    + V+    V
Sbjct: 357 GWM-RQQDGRVVPTELGRRFTNDVVELFLV 385


>gi|330941610|gb|EGH44393.1| HemN family oxidoreductase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 404

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 207/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDMPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALRRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q + + H    YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----ALPEDDILWDIQETGQQLLATHSYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|126175233|ref|YP_001051382.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS155]
 gi|125998438|gb|ABN62513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella baltica OS155]
          Length = 388

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 135/382 (35%), Positives = 208/382 (54%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF G
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIG 75

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  ILDG       S N+EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 76  GGTPSLFDALQIKRILDGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 135

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A        + DL++ LP Q+  +   ++  A +
Sbjct: 136 QSFSKDKLNLLGRIHDQNEAQVAAQKASQAGYLSFNLDLMHGLPNQSFAEAMADIDTAAA 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 196 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQKLAALGYEQYEISAY 251

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +R+  +I+ KHP+ +L       + 
Sbjct: 252 AKPGYQCKHNLNYWQFGDYLGIGCGAHGKVTLPEENRIIRTIKIKHPKGYLSA----SNY 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQ 372
             E   ++ E +A E+LM  LRL   I  +++E+  G++ D   E     +++G +    
Sbjct: 308 TFESIDVAEEDRALEYLMNRLRLMTAIPKQEFELRTGQHRDTLTEGMEKAKQRGLLTE-S 366

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 367 AEHWQLTSKGHMFVNDLLTQFC 388


>gi|254230231|ref|ZP_04923623.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           sp. Ex25]
 gi|262393223|ref|YP_003285077.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
 gi|151937263|gb|EDN56129.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           sp. Ex25]
 gi|262336817|gb|ACY50612.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
          Length = 392

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/389 (36%), Positives = 207/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ +E +I + L +    ++  R    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKTEIPEEEYISALLEDLDTDIEKYRLNEAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI         +EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAGRFVGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A  HLS YQLTIE  T+FY         LP ++   D++ L     +A G   
Sbjct: 184 LDKAIELAPPHLSWYQLTIEPNTMFYYKPP----TLPDDDDLWDIFELGHQKLAAAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQ 299

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E  ++ E +  EF M   RL E    +D+    G  L    E        G
Sbjct: 300 NMVKPYLHTEHVVADEDRPFEFFMNRFRLMEACPKQDYVDTTGLPLSTIQETIDWALEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     +  + T++G   L+ ++     
Sbjct: 360 YLSETA-THWQITEKGKLFLNDLLEAFMA 387


>gi|16761879|ref|NP_457496.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143366|ref|NP_806708.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415042|ref|YP_152117.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363971|ref|YP_002143608.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|213051776|ref|ZP_03344654.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213580617|ref|ZP_03362443.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213609097|ref|ZP_03368923.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213648210|ref|ZP_03378263.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213850156|ref|ZP_03381054.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289825936|ref|ZP_06545095.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25284568|pir||AH0878 probable oxygen-independent coproporphyrinogen III oxidase
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16504181|emb|CAD02928.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29139000|gb|AAO70568.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|56129299|gb|AAV78805.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197095448|emb|CAR61007.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
          Length = 378

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|323498666|ref|ZP_08103657.1| HemN family oxidoreductase [Vibrio sinaloensis DSM 21326]
 gi|323316266|gb|EGA69286.1| HemN family oxidoreductase [Vibrio sinaloensis DSM 21326]
          Length = 391

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/394 (36%), Positives = 210/394 (53%), Gaps = 14/394 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--- 67
           M+     +L +YVH P+CV+KCPYCDFNSH  +  + ++ +I + L +++   +      
Sbjct: 1   MSQLIPPALSLYVHIPWCVQKCPYCDFNSHALKADIPEKEYIAALLQDLEADIKRYQLES 60

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            PR + SIF GGGTPSLI  Q IA +L GI         +EIT+EANP ++E   F GY+
Sbjct: 61  NPRLLHSIFIGGGTPSLISAQGIADLLSGIEARLPFKPGIEITMEANPGTIEAERFAGYQ 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMT 185
           KAGV RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP QT+ 
Sbjct: 121 KAGVTRISVGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPNQTVD 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +L++A++    HLS YQLTIE  T+FY         LP ++   D++ L     + 
Sbjct: 181 QALNDLEKAIALDPPHLSWYQLTIEPNTMFY----YKQPTLPDDDDLWDIFELGHKKLAD 236

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESW 304
            G   YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +
Sbjct: 237 AGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKISFADGRIVRTTKIKHPKGY 296

Query: 305 LKMVRKNGHAVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           L          +  +E ++ + +  EF M   RL E    +D+    G   D   E    
Sbjct: 297 LAAYDNMVKPYLNSEEQVAEQDRPFEFFMNRFRLIEACPKQDFLDTTGLGFDAIQETIDW 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               G+I     S  + T++G   L+ ++     
Sbjct: 357 AIEMGYIAESD-SHWQITEKGKLFLNDLLEAFMA 389


>gi|187925063|ref|YP_001896705.1| coproporphyrinogen III oxidase [Burkholderia phytofirmans PsJN]
 gi|187716257|gb|ACD17481.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phytofirmans PsJN]
          Length = 409

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 212/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH+P+CV+KCPYCDFNSH  +     +  ++ +   +++    L   R + ++F 
Sbjct: 32  PLALYVHFPWCVRKCPYCDFNSHEWKGDTFPENEYLDALRADLEMALPLVWGRQVHTVFI 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+G
Sbjct: 92  GGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  E  L+ LGR H++++A  A+ +A   F   + DL++ALP QT+ Q + +++ ALS
Sbjct: 152 IQSFNEAHLKALGRIHDSAQARHAVEVAATTFDNFNLDLMFALPGQTLAQCQADVETALS 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLSLY LT+E  TLF K        LP  + + D+ +     TSA G   YE+S +
Sbjct: 212 FAPPHLSLYHLTLEPNTLFAKFPP----ALPDADSSADMQDWIHERTSAAGYERYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    +S HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++     G AV 
Sbjct: 268 ARPHRQSKHNLNYWRFGDYLGIGAGAHTKLSFPNRVLRQARYKHPTTFIERALA-GTAVQ 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           E+  + +     EF++  LRL EG  V  +    G ++       +  +R+  I R    
Sbjct: 327 EEREVGTRDLPFEFMLNALRLVEGFPVHRFIERTGMSMTSIEPALQEAERRKLITR-DHE 385

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G   L+  +  L +
Sbjct: 386 KIAPTPLGQAFLND-LQELFL 405


>gi|16766405|ref|NP_462020.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197265423|ref|ZP_03165497.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|16421657|gb|AAL21979.1| putative oxidase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|197243678|gb|EDY26298.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|312914126|dbj|BAJ38100.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225777|gb|EFX50831.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
          Length = 378

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAKRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|167990369|ref|ZP_02571469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205331198|gb|EDZ17962.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261248235|emb|CBG26072.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267995269|gb|ACY90154.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159659|emb|CBW19178.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|323131460|gb|ADX18890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|332989971|gb|AEF08954.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 378

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAKRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNCFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|329296968|ref|ZP_08254304.1| HemN family oxidoreductase [Plautia stali symbiont]
          Length = 376

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/380 (35%), Positives = 211/380 (55%), Gaps = 18/380 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L ++     L+  R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHGEYVQHLLNDLDQDLPLSAGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  ++DG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQQLMDGVRARLPLAMDAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLTRLGRIHGPDEARRAAQLAAGLGLRSFNLDLMHGLPDQSLEEAPDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GA+ ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAYGKLTQPDGRIVRTVKTRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERV 371
            ++  +  E +  EF M   RL E     D++   G  LD    R         G+++  
Sbjct: 297 DKQHDVPDEDKPFEFFMNRFRLLEAAPRADFQRYTG--LDEAVIRPQIDAAIAAGYVQE- 353

Query: 372 QFSRLRCTQRGMTMLDSVIA 391
           Q    + T++G   L+S++ 
Sbjct: 354 QPEHWQITEKGKLFLNSLLE 373


>gi|168236172|ref|ZP_02661230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737657|ref|YP_002116052.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194713159|gb|ACF92380.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290675|gb|EDY30029.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 378

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 212/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + ++LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQMLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFIDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|330826507|ref|YP_004389810.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
 gi|329311879|gb|AEB86294.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
          Length = 410

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/382 (35%), Positives = 214/382 (56%), Gaps = 10/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C++KCPYCDFNSH       + +  +  + + +++    L   R++ +IF
Sbjct: 34  PLSLYVHLPWCLRKCPYCDFNSHHAPGGEPLPEARYTAALVADLEAALPLVWGRTVQTIF 93

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  PQ+I  +L  I     + ++ E+T+EANP + E   F+ YR AGV R+S+
Sbjct: 94  IGGGTPSLFAPQSIDRLLSDIRARLRLEADCEVTLEANPGTFEKERFRAYRDAGVTRLSI 153

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  ++ L+ LGR H+ ++A+AA+  A   F   + D++YALP QT  + E ++++AL
Sbjct: 154 GVQSFNDRHLQALGRVHDRAQALAAVEEAAQAFETFNLDIMYALPGQTPAEQEQDMRQAL 213

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A  H+S+Y LTIE  T F K        LP ++ A  + +    +T+A GL  YE+S 
Sbjct: 214 ALAPPHISIYHLTIEPNTYFAKYPP----RLPEDDQAYAMLDRITELTAAAGLSRYEVSA 269

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G + LHN NYW++GDY+GIG GAHS++      V     + P+ ++      G A+
Sbjct: 270 YAREGHQCLHNRNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRLRDPQLYMAGALS-GRAI 328

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            + E +       EF++  LRLREG +++D+    G+ L       +  + +G I R   
Sbjct: 329 AQDEDVRRADLPFEFMLNALRLREGFALQDFTERTGQPLTAIAQGLQQAEARGLIAR-DM 387

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T+RG   L  + A    
Sbjct: 388 GHVRPTERGFDFLSDLQALFLA 409


>gi|254508606|ref|ZP_05120722.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
 gi|219548457|gb|EED25466.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
          Length = 391

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/394 (35%), Positives = 213/394 (54%), Gaps = 14/394 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--- 67
           M+     +L +YVH P+CV+KCPYCDFNSH ++  + ++ +I + L +++   +      
Sbjct: 1   MSQLIPPALSLYVHIPWCVQKCPYCDFNSHAQKAVIPEKEYIAALLQDLEADIERYQLES 60

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            PR + SIF GGGTPSLI  Q IA +L GI        ++EIT+EANP ++E   F GY+
Sbjct: 61  NPRLLHSIFIGGGTPSLISAQGIAELLSGIEARLPFKPDIEITMEANPGTIEAERFAGYQ 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMT 185
           KAGV RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ 
Sbjct: 121 KAGVTRISVGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSVD 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +L++A++    HLS YQLTIE  TLFY         LP ++   D++ L     + 
Sbjct: 181 QALADLEKAIALDPPHLSWYQLTIEPNTLFY----YKQPTLPDDDDLWDIFELGHQKLAD 236

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESW 304
            G   YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP+ +
Sbjct: 237 AGYVQYEISGYSKPGFQCQHNLNYWRFGDYLGIGCGAHGKISFRDGRIVRTTKIKHPKGY 296

Query: 305 LKMVRKNGHAVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           L          +  +E ++++ +  EF M   RL E    +D+    G   +        
Sbjct: 297 LDAYDNMVKPYLNSEEEVAADDRPFEFFMNRFRLLEACPKQDFLDTTGLGFEAIQATMNW 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               G+I+    +  + T++G   L+ ++     
Sbjct: 357 AIEMGYIDESD-THWQITEKGKLFLNDLLEAFMA 389


>gi|161616068|ref|YP_001590033.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168242907|ref|ZP_02667839.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|194450201|ref|YP_002047092.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205354027|ref|YP_002227828.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858365|ref|YP_002245016.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238909902|ref|ZP_04653739.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|161365432|gb|ABX69200.1| hypothetical protein SPAB_03869 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408505|gb|ACF68724.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|205273808|emb|CAR38803.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205338001|gb|EDZ24765.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|206710168|emb|CAR34524.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|326629140|gb|EGE35483.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 378

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|327395109|dbj|BAK12531.1| oxygen-independent coproporphyrinogen III oxidase- like protein
           YggW [Pantoea ananatis AJ13355]
          Length = 379

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L   R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEHDLPLIQGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+ +  T++++ E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRERLTLTADAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA+ +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLERLGRIHGPEEAKRAAALAQGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----TLPDDDALWDIFEQGHQLLTAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKVRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQF 373
            ++  ++ E +  EF M   RL E     D+    G    L           G+I     
Sbjct: 297 DKQYDVADEDKPFEFFMNRFRLLEAAPRADFSRYTGLHETLIRPQLDEAIAAGYITE-SP 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T++G   L+S++  L +
Sbjct: 356 EHWQITEKGKLFLNSLL-ELFL 376


>gi|242238222|ref|YP_002986403.1| coproporphyrinogen III oxidase [Dickeya dadantii Ech703]
 gi|242130279|gb|ACS84581.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech703]
          Length = 378

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  +  V  + ++   L ++     L G R + SIF G
Sbjct: 6   PLSLYIHIPWCIQKCPYCDFNSHALKGDVPHDEYVSHLLADLDADLPLAGHRPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     +  + EIT+EANP +VE + F GY++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQRLLDGVRARLPLEDDAEITMEANPGTVEADRFNGYQQAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A  LA  +     + DL++ LP+Q++ +   +L++A+ 
Sbjct: 126 QSFSAEKLTRLGRIHGPEEAKRAAQLAAGLGLGSFNLDLMHGLPEQSLDEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  TLF          LP ++   D++     + SA G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTLFGSRPP----RLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYRCRHNLNYWRFGDYLGIGCGAHGKLSFADGRILRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
            +   ++   +  E+ M   RL E     D+  L G        +  +  RQG++     
Sbjct: 297 HQSNEVAMADRPFEYFMNRFRLLEAAPRDDFTALTGLPESAVRRQIDDALRQGYLTE-SA 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + TQ G   L+S++  L +
Sbjct: 356 DHWQITQHGKLFLNSLL-ELFL 376


>gi|307132435|ref|YP_003884451.1| putative oxidoreductase [Dickeya dadantii 3937]
 gi|306529964|gb|ADM99894.1| predicted oxidoreductase [Dickeya dadantii 3937]
          Length = 379

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++     L G R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADLPLAGGRPLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+    ++ +  EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEAMQQLLDGVRARLSLPAEAEITMEANPGTVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A++
Sbjct: 126 QSFSPDKLTRLGRIHGPEEAKRAARLAAGLGLRSFNLDLMHGLPEQSLDEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + S  G   YE S +
Sbjct: 186 LNSPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHRLLSDAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G+ +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFADGRILRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            ++  ++   +  EF M   RL E     D+    G               QG++     
Sbjct: 297 QQRSEVALADRPFEFFMNRFRLLEPAPRVDFTAYTGLPESAIRPHIDAALAQGYLTET-G 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QHWQVTEHGKLFLNSLL-ELFL 376


>gi|332994273|gb|AEF04328.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas sp. SN2]
          Length = 379

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 215/383 (56%), Gaps = 16/383 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +YVH P+CV+KCPYCDFNSH  +  + ++ ++   L ++    +  G R++ +IF
Sbjct: 3   NPPLSLYVHIPWCVQKCPYCDFNSHGLKSALPEKEYVAHLLDDLAIDAKRIGDRTVETIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL   + I+ ++ GI +   ++ N EIT+EANP +VE   F G+ +AG+NRIS+
Sbjct: 63  IGGGTPSLFSAEAISDLVKGIRERVNLADNAEITMEANPGTVESGRFAGFYQAGINRISV 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +   L+ LGR H+ ++AI AI+ A +   P  + DL++ LP+Q++     ++ +A
Sbjct: 123 GIQSFQPAHLKVLGRIHDDTQAIEAINQAHSAGLPTFNLDLMHGLPEQSVENAMSDVDKA 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ +  HLS YQLTIE  T FY         LP +++  D+     +   A G   YEIS
Sbjct: 183 LALSPYHLSWYQLTIEPNTPFYSRPP----ELPDDDILWDIQEQGHARLKAAGYEQYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNG 312
            ++  G +  HNLNYWR+GDY+GIG GAH ++              KHP  ++++ R   
Sbjct: 239 AYAKAGHQCQHNLNYWRFGDYLGIGCGAHGKITDIATGTITRTVKIKHPRGYMEISR--- 295

Query: 313 HAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
              ++ E  + +E    EF M   RL E   ++D+  L G  L  E +  L   Q +G +
Sbjct: 296 -PYLDTETQVPAEDLPFEFFMNRFRLVEPCPIEDYPALTGVELTKEYQDALDDAQAKGLL 354

Query: 369 ERVQFSRLRCTQRGMTMLDSVIA 391
           +    +  + T +G   L+++++
Sbjct: 355 DITD-THWQVTAKGRRYLNTLLS 376


>gi|327534928|gb|AEA93762.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis OG1RF]
          Length = 394

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 17  SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 75

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ K  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 76  TPTSLSAKQLDVLLKGVRKQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 135

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 136 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 196 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 256 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 311

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 312 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 370

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 371 LRLTKKGLFVGNNVFEAFLL 390


>gi|167552004|ref|ZP_02345757.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205323333|gb|EDZ11172.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 378

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRTRLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--LDIECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEVVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|168463709|ref|ZP_02697626.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195633771|gb|EDX52185.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 378

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVHARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|120598141|ref|YP_962715.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. W3-18-1]
 gi|120558234|gb|ABM24161.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella sp. W3-18-1]
          Length = 387

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 205/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R + +IF G
Sbjct: 15  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQVHTIFIG 74

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + I  IL+G       S N+EIT+EANP ++E ++F  YR AG+ R+S+GV
Sbjct: 75  GGTPSLFDAKQIKRILEGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGV 134

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A    +   + DL++ LP Q+  +   ++  A +
Sbjct: 135 QSFAKDKLNLLGRIHDQNEAKIAAQKASQAKYLSFNLDLMHGLPNQSFDEAMADIDTAAA 194

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 195 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQRLAALGYEQYEISAY 250

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +     KHP+ +L     +   
Sbjct: 251 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEQNRIIRTVKIKHPKGYL----SSNQY 306

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
            VE   ++ E +A E+LM  LRL   I  +++E   G + +   E     +++G +    
Sbjct: 307 TVELTEVAEEDRALEYLMNRLRLMTPIPKQEFEQRTGLHRETLSEGMEKAKQRGLLTE-S 365

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 366 AEYWQLTHKGHMFVNDLLTQFC 387


>gi|320321989|gb|EFW78085.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330906|gb|EFW86880.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330872130|gb|EGH06279.1| HemN family oxidoreductase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 404

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAHS++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHSKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGAKLLPLDELPFEFLMNALRLTNGVDAALFRKRTGLSLDSLTEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|295097494|emb|CBK86584.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 382

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 209/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVSYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAVDAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA  +  R  +FDL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEPKLKRLGRIHGPEEAKRAANLATGLGLRSFNFDLMHGLPDQSLEEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
             +  + +  +  EF M   RL E     ++ +  G     +  + +  L  QG++    
Sbjct: 297 ERQHDVEAADKPFEFFMNRFRLLEAAPRAEFALYTGLPESVIRPQIDEAL-AQGYLTECD 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S  + T+ G   L+S++  L +
Sbjct: 356 ES-WQITEHGKLFLNSLL-ELFL 376


>gi|90580279|ref|ZP_01236086.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
 gi|90438581|gb|EAS63765.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
          Length = 387

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/387 (34%), Positives = 208/387 (53%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSI 71
              L +YVH P+CV+KCPYCDFNSH  +  + + ++I + + +++      + + G R +
Sbjct: 4   PPPLSLYVHIPWCVQKCPYCDFNSHALKTDLPELDYIDALIDDLETDLSAYQLINGARPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L  I +    S ++EIT+EANP +VE   F+ Y +AGVN
Sbjct: 64  HSIFIGGGTPSLISPSEIGRLLKAIEQRIPFSDDIEITMEANPGTVEAGRFEAYSQAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+G+QS + + L  LGR H A EAI A  LA+       + DL++ LP Q++     +
Sbjct: 124 RISIGIQSFQNEKLERLGRIHGADEAIRAAGLAKKAGLNSFNVDLMHGLPDQSVNDAISD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A++    HLS YQLTIE  TL+Y         LP ++   D++     +    G   
Sbjct: 184 LKQAIALDPPHLSWYQLTIEPNTLYYSKPP----TLPDDDDLWDIFEQGHQLLKEAGYQQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +L+   
Sbjct: 240 YEISGYSKQGKQCQHNLNYWRFGDYLGIGCGAHGKISFADGQIIRTVKVKHPRGYLQA-- 297

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
            +   + ++  ++  ++  EF M   RL E    +D+    G  L            Q +
Sbjct: 298 -DKPYLTQENKVADGERPFEFFMNRFRLLESCPKQDFVARTGLALTTIEPTIDWAIAQNY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++       + T+ G   L+ ++A   
Sbjct: 357 LQDT-GDHWQITEHGKLFLNDLLAAFV 382


>gi|157148505|ref|YP_001455824.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157085710|gb|ABV15388.1| hypothetical protein CKO_04331 [Citrobacter koseri ATCC BAA-895]
          Length = 378

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDTNVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPEEAKRAANLASGLGLRSFNLDLMHGLPDQTLEEALGDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 ARPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G    +  E+      QG++   + 
Sbjct: 297 ESQRDVEQADKPFEFFMNRFRLLEAAPRAEFTQYTGLAEAVIREQLDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + TQ G   L+S++  L +
Sbjct: 356 QHWQITQHGKLFLNSLL-ELFL 376


>gi|320087536|emb|CBY97301.1| putative oxidase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 382

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 10  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 70  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 130 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 190 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 246 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 301 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 359

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 360 QYWQITRHGKLFLNSLL-ELFL 380


>gi|218710635|ref|YP_002418256.1| coproporphyrinogen III oxidase [Vibrio splendidus LGP32]
 gi|218323654|emb|CAV19953.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           [Vibrio splendidus LGP32]
          Length = 395

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/389 (35%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L +    ++  +    PR +
Sbjct: 8   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEKEYIDALLEDLDTDIEKYQLNGAPRPL 67

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAG+ 
Sbjct: 68  HSIFIGGGTPSLFSPEGIGRLLQGIEQRIPFKPEIEITMEANPGTIEAERFAGYQKAGIT 127

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +
Sbjct: 128 RISVGVQSFEQEKLERLGRIHGQDEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALAD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L RA+     HLS YQLTIE  T+FY         LP ++   D+++L     +  G   
Sbjct: 188 LDRAIELNPPHLSWYQLTIEPNTMFY----YKTPKLPDDDDLWDIFDLGHKKLADAGYVQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 244 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQ 303

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E  + +E +  EF M   RL E    +D+    G   D         +  G
Sbjct: 304 NLVKPYLSDELEVPNEDRPFEFFMNRFRLMEACPKQDFIDTTGLEFDSIQPTIEWAKDLG 363

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     S  + T++G   L+ ++     
Sbjct: 364 YLNETD-SHWQITEKGKLFLNDLLEAFMA 391


>gi|198243140|ref|YP_002217079.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197937656|gb|ACH74989.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
          Length = 378

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EAI A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAIRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G   
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYQ 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL +     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLKRAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|289434758|ref|YP_003464630.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289171002|emb|CBH27544.1| oxygen-independent coproporphyrinogen III oxidase [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
          Length = 384

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 193/379 (50%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EMQ          I ++F GGG
Sbjct: 12  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMQITAANKQMEPIDTVFVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I + + +   VE + EANP  + V   Q  +  GVNRIS+GVQS
Sbjct: 71  TPTTLNEAQIAKLCTAIQEIFPMKEEVEFSFEANPGDLSVAKVQTMKDYGVNRISMGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR H   +   ++  +    F  +S DLI++LP QT   ++  L +AL+  
Sbjct: 131 FNNDLLKKIGRIHTVKDVYQSVENMRTVGFENVSIDLIFSLPGQTEADFQDTLNQALALD 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L       HG   YEISN + 
Sbjct: 191 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLVEMEKHGRKQYEISNFAK 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW    Y G G GAH  +    +     I+K    +++ +++N   V ++
Sbjct: 251 EGFESKHNITYWSNEHYYGFGAGAHGYIGNTRYSNFGPIKK----YMEPLQENKLPVFQQ 306

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR   G+S   ++   G++LD   +  +Q+   +G++E  + + 
Sbjct: 307 KELTLKEKMEEEMFLGLRKVSGVSKARFQRKFGQDLDATFQNAIQKTMAKGWLENNEEN- 365

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 366 VALTRNGRFLGNNVFQEFL 384


>gi|302186237|ref|ZP_07262910.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           642]
          Length = 404

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLKGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L +A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLHQAIT 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +AHG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQEAGQQLLAAHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|261868181|ref|YP_003256103.1| coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413513|gb|ACX82884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 389

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/385 (35%), Positives = 213/385 (55%), Gaps = 18/385 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + +++++Q  L ++       ++    R + S
Sbjct: 13  PLSLYVHIPWCVQKCPYCDFNSHAQKGVIPEQDYVQHLLADLTADLARYQESVQQRPLHS 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL  P  IA +L  I ++   + N+EIT+EANP + E   F+GY +AGVNRI
Sbjct: 73  IFIGGGTPSLFSPDTIAYLLAQIEQHIPFAPNIEITLEANPGTAEAARFRGYVQAGVNRI 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  ++ L+ LGR HNA EA +A+  A  +     + DL++ LP QT+ +   +L+
Sbjct: 133 SMGIQSFSDEKLQKLGRIHNAEEAKSAVGFAGVSHLRSFNLDLMHGLPNQTLNEALDDLR 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+F          LP ++   D++     + +A G   YE
Sbjct: 193 QAIVLAPPHLSWYQLTIEPNTMFAYRPP----TLPDDDELWDIFEQGHQLLTAAGYQQYE 248

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++     
Sbjct: 249 TSAYAKAGFQCQHNLNYWRFGDYLAIGCGAHGKLSFPNGNILRYSKTKHPKGYMR----- 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
           G  + E++ +S + +  EF M   RL E +   D+E L G  L          Q Q FI 
Sbjct: 304 GEYLYEEQQVSVKDRPFEFFMNRFRLLEPVPKSDFEQLTGLPLSAVENAIVWAQEQKFIT 363

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
               +  + T+ G   L+ ++    
Sbjct: 364 ETDRT-WQITEHGKLFLNELLERFL 387


>gi|320155273|ref|YP_004187652.1| radical SAM family enzyme, coproporphyrinogen III oxidase
           oxygen-independent-like protein clustered with
           nucleoside-triphosphatase RdgB [Vibrio vulnificus
           MO6-24/O]
 gi|319930585|gb|ADV85449.1| radical SAM family enzyme, coproporphyrinogen III oxidase
           oxygen-independent clustered with
           nucleoside-triphosphatase RdgB [Vibrio vulnificus
           MO6-24/O]
          Length = 389

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L     +++  +    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKEQIPEQMYINALLEDLDRDIEKYQLHRAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI K    + ++EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIRDLLQGIEKRIPFTPSIEITMEANPGTIEAERFAGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   
Sbjct: 184 LDKAIELNPPHLSWYQLTIEPNTMFYYKPP----ALPDDDQLWDIFEQGHQKLTQAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKIKHPKGYLAAHQ 299

Query: 310 KNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQG 366
                 ++ E L  E  +  EF M   RL E    +D+    G  L       +     G
Sbjct: 300 NMVKPYLDSEQLVEEIDRPFEFFMNRFRLMEACPKQDFIDTTGLPLSFIETTIQWAVEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   + S  + T++G   L+ ++     
Sbjct: 360 YLNDNETS-WQITEKGKLFLNDLLEAFMA 387


>gi|323480535|gb|ADX79974.1| oxygen-independent coproporphyrinogen III oxidase 1 [Enterococcus
           faecalis 62]
          Length = 394

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 17  SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 75

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 76  TPTSLSAKQLDVLLKGVREQLTFDDQNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 135

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 136 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 196 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 256 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 311

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 312 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 370

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 371 LRLTKKGLFVGNNVFEAFLL 390


>gi|21232683|ref|NP_638600.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767295|ref|YP_242057.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21114492|gb|AAM42524.1| oxidoreductase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572627|gb|AAY48037.1| oxidoreductase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 385

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/390 (35%), Positives = 215/390 (55%), Gaps = 11/390 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +YVH P+CV+KCPYCDFNSH  +     ++++ + + ++     L   R 
Sbjct: 1   MPDLIPPPLALYVHLPWCVRKCPYCDFNSHAAKGAPPFDDYVDALIRDLDADLPLVWGRV 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL  P+ I   L   A     + N+EIT+E NP + E   F GYR AGV
Sbjct: 61  VHSVFFGGGTPSLFPPEAIDRFLQAAAARLRFAPNLEITLETNPGTAEHGRFDGYRAAGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NR+S GVQS ++ +L+ LGR H+++EA  AI LA++      + DL+YALP+QT+ Q E 
Sbjct: 121 NRLSFGVQSFDDAALQRLGRIHDSAEAERAIKLAQDAGYDNFNIDLMYALPEQTLAQAEH 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA +    HLS YQLT+E  T+F+         +P ++ A D+    Q + +A G  
Sbjct: 181 DLERAFALQPTHLSHYQLTLEPNTVFFARPPQ---GIPDDDDAWDMQEHCQRLLAAAGYA 237

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VAISIEKHPESWLKM 307
            YE+S ++  G +  HNLNYWR+GDY+GIG GAH ++  G+ +  +     KHP+S+L  
Sbjct: 238 QYEVSAYARPGRQCAHNLNYWRFGDYLGIGAGAHGKISSGAEQQVLRRWKHKHPQSYLAS 297

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQ 365
                    + E + + +   E+++  LRL EG  + D+E   G    +          Q
Sbjct: 298 AGSAAAIGGD-EHVPAARLPFEYMLNLLRLHEGFRLSDFEACTGLPAQVLQAPLARAMAQ 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G++   Q  R+  T+ G    + V+  L +
Sbjct: 357 GWLVE-QHGRIVPTELGRRFTNDVV-ELFL 384


>gi|87200079|ref|YP_497336.1| coproporphyrinogen III oxidase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135760|gb|ABD26502.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 384

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 178/381 (46%), Positives = 244/381 (64%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVHWPFC+ KCPYCDFNSHV R +     +  + L +M+   +LT  R +SSIFFG
Sbjct: 3   PLALYVHWPFCLAKCPYCDFNSHV-RARTDIAAWQAALLADMRHEARLTPGRPLSSIFFG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P  +  +L    + W  +  +EIT+EANPSSVE  NF     AG+NR+SLG+
Sbjct: 62  GGTPSLMPPALVEALLAEAERLWGFAPGIEITLEANPSSVEAANFAALSSAGINRVSLGL 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+L++ +L+FLGR H+ SE++AA+ LA+  F R+SFDLIYA P QT  QWE EL+RAL +
Sbjct: 122 QALDDNTLKFLGRLHDVSESLAALDLAQTHFGRVSFDLIYARPGQTPAQWEAELKRALGF 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLSLYQLTIE GT F  + ++G L    ++ A DL+ LT+ +TSA  L AYE SNH+
Sbjct: 182 GTGHLSLYQLTIEPGTRFATLVREGKLAPLDDDEAADLFALTRELTSAASLPAYETSNHA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YWRY DYIGIGPGAH R        A    K PE++L+ V ++G  +VE
Sbjct: 242 RPGEESRHNLTYWRYQDYIGIGPGAHGR----RLGAATVRHKKPENFLRAVSEHGQGIVE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERVQF 373
           +  L+  +QA E ++MGLRL EGIS        G   D   +R       R G++   + 
Sbjct: 298 ERQLTPSEQAIEAVLMGLRLAEGISPPALAARFGFAEDEMIDRRNRESFARMGYLNDTE- 356

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           + L+ T++G  +L++++A+L 
Sbjct: 357 TCLKVTEQGAPVLEALLADLV 377


>gi|257483582|ref|ZP_05637623.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331009659|gb|EGH89715.1| HemN family oxidoreductase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 404

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQVKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +E  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQESKLKALGRIHNGGEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPIHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 TRLIATPQGQLFLNDLLQYFLI 404


>gi|313637790|gb|EFS03140.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria seeligeri FSL S4-171]
          Length = 384

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 193/379 (50%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EMQ          I ++F GGG
Sbjct: 12  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMQITAANKQMEPIDTVFVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I + + +   VE + EANP  + V   Q  +  GVNRIS+GVQS
Sbjct: 71  TPTTLNEAQIAKLCTAIQEIFPMKEEVEFSFEANPGDLSVAKVQTMKDYGVNRISMGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR H   +   ++  +    F  +S DLI++LP QT   ++  L +AL+  
Sbjct: 131 FNNDLLKKIGRIHTVKDVYQSVENMRTVGFENVSIDLIFSLPGQTEADFQDTLNQALALD 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LP ++   ++Y+L       HG   YEISN + 
Sbjct: 191 LPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLVEMEKHGRKQYEISNFAK 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW    Y G G GAH  +    +     I+K    +++ +++N   V ++
Sbjct: 251 EGFESKHNITYWSNEHYYGFGAGAHGYIGNTRYSNFGPIKK----YMEPLQENKLPVFQQ 306

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L+ +++ +E + +GLR   G+S   ++   G++LD   +  +Q+   +G++E  + + 
Sbjct: 307 KELTLKEKMEEEMFLGLRKVSGVSKARFQRKFGQDLDATFQNAIQKTMAKGWLENNEEN- 365

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 366 VALTRNGRFLGNNVFQEFL 384


>gi|317403014|gb|EFV83552.1| porphyrin oxidoreductase [Achromobacter xylosoxidans C54]
          Length = 407

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 127/376 (33%), Positives = 213/376 (56%), Gaps = 8/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L VYVH P+CV+KCPYCDFNSH     ++ +  ++ +  ++++        R + S+F 
Sbjct: 31  PLSVYVHVPWCVRKCPYCDFNSHAAPGGEIPERAYLDALRSDLEQALPSIWGRQVVSVFI 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     V  + EIT+EANP + E   F+ Y  +GV R SLG
Sbjct: 91  GGGTPSLLSAAGLDELLAMLRACLNVWPDAEITMEANPGTAEAGRFRDYAASGVTRFSLG 150

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS ++  L+ LGR H++++A AAI +A+   PR++ D+++ALP QT+     +L++A+ 
Sbjct: 151 IQSFDDAQLKKLGRIHDSAQARAAIEMAQRAAPRVNLDMMFALPGQTLAACVDDLRQAIG 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +HLSLY LT+E  T+F K   +    LP ++ +  + +  ++  +A GL  YE+S +
Sbjct: 211 FGTEHLSLYHLTMEPNTVFAKFPPE---DLPDDDTSAAMQDAVEAELAAAGLARYEVSAY 267

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-NGHAV 315
           +  GA   HNLNYW +GDY+G+GPGAH ++      V  +  + PESWL+     +G  +
Sbjct: 268 ARPGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIVREARLRSPESWLRAAAARDGSHL 327

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            E   +  ++   EF++  LRL++G++   +    G +L            +G ++    
Sbjct: 328 AESRQVGPDELPFEFMLNALRLKDGVAATLFNERTGLSLAAIAHQLEAASAKGLLD-ADP 386

Query: 374 SRLRCTQRGMTMLDSV 389
           +RLR T  G   L+ +
Sbjct: 387 TRLRATPLGWRFLNDL 402


>gi|294629289|ref|ZP_06707849.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           e14]
 gi|292832622|gb|EFF90971.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           e14]
          Length = 413

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 123/400 (30%), Positives = 193/400 (48%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++
Sbjct: 22  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLADEVR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP +V+
Sbjct: 82  LARKVLGDDPREVRTVFVGGGTPTLLAAADLVRMLHAIRDEFGLAPDAEITTEANPETVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R+ G NRIS G+QS     LR L R H      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLAALREGGFNRISFGMQSARPHVLRILDRTHTPGRPEACVAEARAAGFEHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 202 GTPGESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + + + S  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IAEEVLSGAGFEWYEVSNWATSAAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E LS E +  E +++ LRLREG  +            +
Sbjct: 318 NVKHPGAYAGALAEGRSPGAGREVLSGEDRRVERILLELRLREGAPLSLLREEG-----L 372

Query: 357 ECERNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
              R    +G +E    +  R   T RG  + D+V+ +L 
Sbjct: 373 AAARRALSEGLLEAGPYEAGRAVLTLRGRLLADAVVRDLV 412


>gi|29375873|ref|NP_815027.1| coproporphyrinogen III oxidase [Enterococcus faecalis V583]
 gi|229546018|ref|ZP_04434743.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX1322]
 gi|256852946|ref|ZP_05558316.1| coproporphyrinogen III oxidase [Enterococcus faecalis T8]
 gi|294781172|ref|ZP_06746521.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis PC1.1]
 gi|29343335|gb|AAO81097.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Enterococcus faecalis V583]
 gi|229308861|gb|EEN74848.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX1322]
 gi|256711405|gb|EEU26443.1| coproporphyrinogen III oxidase [Enterococcus faecalis T8]
 gi|294451739|gb|EFG20192.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis PC1.1]
          Length = 394

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 17  SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 75

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 76  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 135

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 136 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 196 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 256 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 311

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 312 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 370

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 371 LRLTKKGLFVGNNVFEAFLL 390


>gi|296104619|ref|YP_003614765.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059078|gb|ADF63816.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 382

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 210/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVPYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQSLLDGVRARLNLAADAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPEEAKRAAKLATELGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
             +  + +  +  EF M   RL E    K++ +  G     +  + +  L  QG++   +
Sbjct: 297 ERQHDVEAVDKPFEFFMNRFRLLEAAPRKEFALYTGLPETVIRPQIDEAL-AQGYLTECE 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T+ G   L+S++  L +
Sbjct: 356 -EYWQITEHGKLFLNSLL-ELFL 376


>gi|183596318|ref|ZP_02958346.1| hypothetical protein PROSTU_00053 [Providencia stuartii ATCC 25827]
 gi|188023922|gb|EDU61962.1| hypothetical protein PROSTU_00053 [Providencia stuartii ATCC 25827]
          Length = 379

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 213/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  + Q  +++  L +++   +  G R+I ++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHTLKGDIPQREYVEHLLHDLEIDAKFIGDRAIKTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +++  ++DG+ +   +    EIT+EANP +VE + F GY+KAG+NRIS+GV
Sbjct: 66  GGTPSLLSAESMQALMDGVRQRVHLDPQAEITMEANPGTVEADRFSGYQKAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H A EA  A  LA  +  R  + DL++ LP QT  +   +L++A++
Sbjct: 126 QSFGDDKLITLGRIHGAEEAKRAAKLATQLNLRSFNLDLMHGLPSQTRDEGLSDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F          LP ++   ++Y+    + +A G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTQFGSRPP----TLPDDDTLWEIYSEGHKLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  +
Sbjct: 242 AKPGFQCEHNLNYWRFGDYLGIGCGAHGKISFTDGRIMRTIKTKHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            +   + ++ +  E+ M   RL E +  K++    G    +          +G+I   + 
Sbjct: 297 QKSYDVDAQDRPFEYFMNRFRLLEPMPRKEFSDYTGLPESVVRDSLNEALNKGYITENEH 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 357 E-WQITKHGKLFLNSLL-ELFL 376


>gi|37681064|ref|NP_935673.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
 gi|37199814|dbj|BAC95644.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
          Length = 389

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L     +++  +    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHTLKEQIPEQMYINALLEDLDRDIEKYQLHRAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI K    + ++EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIRDLLQGIEKRIPFTPSIEITMEANPGTIEAERFAGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   
Sbjct: 184 LDKAIELNPPHLSWYQLTIEPNTMFYYKPP----ALPDDDQLWDIFERGHQKLTQAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKIKHPKGYLAAHQ 299

Query: 310 KNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQG 366
                 ++ E L  E  +  EF M   RL E    +D+    G  L       +     G
Sbjct: 300 NMVKPYLDSEQLVEEIDRPFEFFMNRFRLMEACPKQDFIDTTGLPLSFIETTIQWAVEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   + S  + T++G   L+ ++     
Sbjct: 360 YLNDNETS-WQITEKGKLFLNDLLEAFMA 387


>gi|204928090|ref|ZP_03219290.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204322412|gb|EDZ07609.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 378

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++        +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQR-----RYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|229550209|ref|ZP_04438934.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis ATCC 29200]
 gi|300859895|ref|ZP_07105983.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TUSoD Ef11]
 gi|307277568|ref|ZP_07558660.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2134]
 gi|312952302|ref|ZP_07771177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0102]
 gi|229304647|gb|EEN70643.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis ATCC 29200]
 gi|300850713|gb|EFK78462.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TUSoD Ef11]
 gi|306505833|gb|EFM75011.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2134]
 gi|310629686|gb|EFQ12969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0102]
 gi|315147785|gb|EFT91801.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4244]
          Length = 394

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 17  SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 75

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 76  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 135

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 136 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 196 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 256 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 311

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 312 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIE-EADI 370

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 371 LRLTKKGLFVGNNVFEAFLL 390


>gi|89074113|ref|ZP_01160612.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
 gi|89050049|gb|EAR55575.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
          Length = 387

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/387 (34%), Positives = 211/387 (54%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSI 71
              L +YVH P+CV+KCPYCDFNSH  +  + + ++I + + +++      + + G R +
Sbjct: 4   PPPLSLYVHIPWCVQKCPYCDFNSHALKTDLPELDYIDALIDDLETDLSAYQLINGARPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P  I  +L  I +    S ++EIT+EANP +VE   F+ YR+AGVN
Sbjct: 64  HSIFIGGGTPSLISPSEIGRLLKAIEQRILFSDDIEITMEANPGTVEAGRFEAYRQAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+G+QS + + L  LGR H A EAI A  LA+       + DL++ LP Q+++    +
Sbjct: 124 RISIGIQSFQNEKLDRLGRIHGADEAIRAAGLAKKAGLNSFNVDLMHGLPDQSVSDAISD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A++    HLS YQLTIE  TL+Y         LP ++   D++     + +  G   
Sbjct: 184 LKQAIALDPPHLSWYQLTIEPNTLYYSKPP----TLPDDDDLWDIFEQGHQLLTEAGYQQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +L+   
Sbjct: 240 YEISGYSKTGKQCQHNLNYWRFGDYLGIGCGAHGKISFADGQIIRTVKVKHPRGYLQA-- 297

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
            +   + ++  ++  ++  EF M   RL E    +D+    G  L            Q +
Sbjct: 298 -DKPYLTQENQVADGERPFEFFMNRFRLLESCPKQDFVARTGLALTTIEPTIDWAITQNY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++       + T+ G   L+ ++A   
Sbjct: 357 LQDT-GDHWQITEHGKLFLNDLLAAFV 382


>gi|89091919|ref|ZP_01164874.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
 gi|89083654|gb|EAR62871.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
          Length = 380

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 138/382 (36%), Positives = 215/382 (56%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH +R ++ ++ +I+  L +++        R+I SIF G
Sbjct: 7   PLSLYIHVPWCIRKCPYCDFNSHAQRGELPEQAYIECLLEDLRSELHFAQGRTIQSIFIG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +  +   +L GI     +  + EIT+EANP + E   F GY+ AG+NR+S+G+
Sbjct: 67  GGTPSLFQADSFKRLLLGINAIIPIERDAEITLEANPGTFEQEKFIGYKDAGINRLSIGI 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS     L+ LGR H++ EA+ A  LAR IFPR++ DL++ LP Q+ T    +LQ+A+  
Sbjct: 127 QSFNNNHLQALGRIHSSDEAVRAATLAREIFPRLNLDLMHGLPSQSETDAIADLQQAIDL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DHLS YQLTIE  T FY         LP +     +    Q + + H L  YEIS ++
Sbjct: 187 DPDHLSWYQLTIEPNTEFYSK----SPSLPVDETLWGIQEQGQQLLADHLLAQYEISAYA 242

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
                +S HNLNYW +GDYIGIG GAH ++ +      +    +K P+++++   +    
Sbjct: 243 KGEQFKSRHNLNYWSFGDYIGIGAGAHGKITLPDEDRIIRRWKQKQPKAYMQSTTR---- 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
           +   + ++ E++A EF+M  LRL  G+ V+ +    G  L        N + +G +E+  
Sbjct: 299 LTGDQPITREERAFEFMMNALRLYHGVPVELFAERTGLPLTDVSALLDNARGKGLLEKGT 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             RL  TQ G   L+ +++   
Sbjct: 359 -DRLAPTQHGRLFLNDLLSLFL 379


>gi|319795586|ref|YP_004157226.1| oxygen-independent coproporphyrinogen iii oxidase [Variovorax
           paradoxus EPS]
 gi|315598049|gb|ADU39115.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus EPS]
          Length = 420

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/381 (35%), Positives = 210/381 (55%), Gaps = 15/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR-------YKVGQENFIQSFLTEMQWMRQLTGPRS 70
            L +Y+H P+C++KCPYCDFNSH  R         + +  +I + + ++     L   R+
Sbjct: 37  PLSLYIHLPWCLRKCPYCDFNSHEWRATSAADAEGIPEAAYIDALVADLDAALPLIWGRT 96

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +IF GGGTPSL  PQ I  +L  +     ++ + EIT+EANP + E N F+ YR AGV
Sbjct: 97  VHTIFIGGGTPSLFSPQAIDRLLGDVRARLKLAPDCEITLEANPGTFERNRFRAYRSAGV 156

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            R+S+GVQS  ++ L  LGR H+ ++AIAA+  A + F   + DL+YALP QT+   E +
Sbjct: 157 TRLSVGVQSFNDEHLTALGRVHDRAQAIAAVEEAASAFDTFNLDLMYALPGQTLEHLEAD 216

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+ A  H+S+Y LTIE  T F K        LP +++A  + +     T   G+  
Sbjct: 217 LSQALALAPPHISVYHLTIEPNTWFAKFPP----TLPEDDIAYAMLDRITERTGEQGMSR 272

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+S ++  G +  HNLNYW++GDY+GIG GAHS++      V     + P  +++  R 
Sbjct: 273 YEVSAYAREGHQCAHNLNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRYREPRLYMENARA 332

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFI 368
            G AV + + +S      EF++  LRL+ G ++  +    G  +          +R+G +
Sbjct: 333 -GAAVSQSDEVSLADLPFEFMLNALRLKAGFTLPQFSERTGLAMTSIQRGLEEAERKGLV 391

Query: 369 ERVQFSRLRCTQRGMTMLDSV 389
            R    R+  T+RG+  L  +
Sbjct: 392 AR-DLFRVWPTERGLDFLSDL 411


>gi|84394059|ref|ZP_00992795.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
 gi|84375301|gb|EAP92212.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
          Length = 395

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/389 (35%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L ++    +       PR +
Sbjct: 8   PPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEKEYIDALLEDLDTDIEKYQLNGMPRPL 67

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSL  P+ I  +L GI +       +EIT+EANP ++E   F GY+KAG+ 
Sbjct: 68  HSIFIGGGTPSLFSPEGIGRLLQGIEQRIPFKPEIEITMEANPGTIEAERFAGYQKAGIT 127

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E++ L  LGR H   EA+ A HLA  I     + DL++ LP Q++ Q   +
Sbjct: 128 RISVGVQSFEQEKLERLGRIHGQVEAVNAAHLAHKIGLNSFNLDLMHGLPDQSIDQALAD 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  T+FY         LP ++   D+++L     +  G   
Sbjct: 188 LDKAIELDPPHLSWYQLTIEPNTMFY----YKTPKLPDDDDLWDIFDLGHKKLADAGYVQ 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +L   +
Sbjct: 244 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIVRTTKVKHPRGYLAAYQ 303

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
                 +  E  + +E +  EF M   RL E    +D+    G   D   E     +  G
Sbjct: 304 NLVKPYLSDELEVPNEDRPFEFFMNRFRLMEACPKQDFIDTTGLGFDSIQETIEWAKELG 363

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++     +  + T++G   L+ ++     
Sbjct: 364 YLNETD-THWQITEKGKLFLNDLLEAFMA 391


>gi|168234345|ref|ZP_02659403.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194468958|ref|ZP_03074942.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194455322|gb|EDX44161.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205331708|gb|EDZ18472.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 378

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVVWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++N EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAANAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|295112842|emb|CBL31479.1| coproporphyrinogen III oxidase, anaerobic [Enterococcus sp. 7L76]
          Length = 394

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E++  + L   + + +I+ GGG
Sbjct: 17  SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIRLTQALYPEQEMKTIYIGGG 75

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 76  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 135

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 136 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 195

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 196 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 255

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 256 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 311

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 312 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 370

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 371 LRLTKKGLFVGNNVFEAFLL 390


>gi|258543385|ref|YP_003188818.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634463|dbj|BAI00439.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637521|dbj|BAI03490.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640573|dbj|BAI06535.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643630|dbj|BAI09585.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646685|dbj|BAI12633.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649738|dbj|BAI15679.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652726|dbj|BAI18660.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655782|dbj|BAI21709.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 384

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 169/384 (44%), Positives = 251/384 (65%), Gaps = 6/384 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            ++L +Y+HWPFC+ KCPYCDFNSHV R ++ Q  F Q+  TE+ +     G R ++SIF
Sbjct: 3   QDALALYIHWPFCLAKCPYCDFNSHV-RAEIPQARFAQALRTELAYEANRLGHRRLTSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ PQ +A ++D     +  + N+EIT+EANP+SVE    + +R+AG+NR+SL
Sbjct: 62  FGGGTPSLMAPQTVANLIDDATSLFDAAPNLEITLEANPTSVEAERLKDFRQAGINRVSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +++L FLGR H+A++A+AA+ LAR++FPR++FDLIYA P Q++  W+ EL+ AL
Sbjct: 122 GIQALNDEALHFLGRQHSATQALAALELARSLFPRITFDLIYARPNQSVAAWKTELETAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               DH+SLYQLTIE GT F  +++ G   LP E  A  LY  T +IT AHGL+AYE+SN
Sbjct: 182 QLVADHVSLYQLTIEPGTKFEALYRQGSFSLPDEETAAALYETTTAITHAHGLNAYEVSN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G+ S HNL YW YGDY+G+GPGAH R+ +     A    + PE W ++V + G   
Sbjct: 242 YAKPGSASRHNLTYWHYGDYLGLGPGAHGRITLDDQLYATRRHRAPEPWAELVERTGSGQ 301

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERV 371
             +E L  +++A E L+MGLRL+EGI++  ++   G      LD         +G++   
Sbjct: 302 TSQEQLVPQERAREMLLMGLRLQEGIALSHFQARTGLQLTETLDPVILAAAVEEGYLVHT 361

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + L  T+ G   L++++  L +
Sbjct: 362 -PTHLYATEEGRLRLEALLHALVL 384


>gi|146293787|ref|YP_001184211.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella putrefaciens CN-32]
 gi|145565477|gb|ABP76412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella putrefaciens CN-32]
          Length = 387

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ QE ++ + L +++    L   R I +IF G
Sbjct: 15  PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQEAYVDALLEDLRQDLHLVQGRQIHTIFIG 74

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + I  IL+G       S N+EIT+EANP ++E ++F  YR AG+ R+S+GV
Sbjct: 75  GGTPSLFDAKQIKRILEGANALIPFSDNIEITMEANPGTLEHDDFSAYRAAGITRLSIGV 134

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA  A   A    +   + DL++ LP Q+  +  ++++ A +
Sbjct: 135 QSFAKDKLNLLGRIHDQNEAKIAAQKASQAKYLSFNLDLMHGLPNQSFDEAMLDIETAAA 194

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 195 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWHIYEQGQQRLAALGYEQYEISAY 250

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V +   +  +  +  KHP+ +L     +   
Sbjct: 251 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKVTLPEQNRIIRTAKIKHPKGYL----SSNQY 306

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
            VE   ++ E +A E+LM  LRL   I  +++E   G + +   E     +++G +    
Sbjct: 307 TVELTEVAEEDRALEYLMNRLRLMTPIPKQEFEQRTGLHRETLSEGMEKAKQRGLLTE-S 365

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 366 AEYWQLTHKGHMFVNDLLTQFC 387


>gi|289578104|ref|YP_003476731.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter italicus Ab9]
 gi|289527817|gb|ADD02169.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter italicus Ab9]
          Length = 375

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 118/381 (30%), Positives = 209/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDFNS+   Y    E++I++ L  M+     T   ++ S++ 
Sbjct: 2   KEIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFEDYIRALL--MEIESNSTKDYNVVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  I +IL  + K + +  + EITIE NP  +     + Y+  G+NR+S+G
Sbjct: 59  GGGTPNLLPPYYIEVILKSVFKYYKLVDDCEITIEMNPGLITEEKLEIYKANGINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L+++GR H   E +    L +  F  ++ DL+YALP QT  +W+  L+  + 
Sbjct: 119 LQAFQNRLLKYIGRIHTIEEFLENYELVKKFFDNINIDLMYALPTQTFKEWQETLKEIVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +E  T FYK+++ G L +  E   +++Y+         G H YEISN 
Sbjct: 179 LQPTHISTYSLILEPNTSFYKLYEKGQLPIVDEEKELNMYHWGIEFLKEKGYHHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HN+ YW+  +Y+G G GAHS ++   +    S     + ++K + +   AV 
Sbjct: 239 ALPTFECRHNILYWQCKNYLGFGAGAHSYMEDVRYSNIEST----KDYIKGILERKSAVK 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           EK  L+ + +  EF+ +GLR+ +G+  KD++ +   +L    ++ +Q   ++G I +V  
Sbjct: 295 EKIKLTKQDKMAEFMFLGLRMTKGVCDKDFKKIFDVSLFEIYKKVIQKYLKEGLI-KVDN 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             ++ T+RG+ + + +     
Sbjct: 354 ECVKLTERGIDVSNVIFEEFL 374


>gi|212709351|ref|ZP_03317479.1| hypothetical protein PROVALCAL_00387 [Providencia alcalifaciens DSM
           30120]
 gi|212688263|gb|EEB47791.1| hypothetical protein PROVALCAL_00387 [Providencia alcalifaciens DSM
           30120]
          Length = 379

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 128/382 (33%), Positives = 214/382 (56%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + ++ Q  +++  L ++    +L G R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHTLKGEIPQTEYVEHLLNDLDKDAELIGSRPVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +++ +++DG+ +   +  N E+T+EANP +VE + F GY+ +G+NRIS+GV
Sbjct: 66  GGTPSLLSAESMQMLMDGVRQRVNLDPNAEVTMEANPGTVEADRFSGYQTSGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H  +EA  A  LA N+  R  + DL++ LP QT  +   +L++A+ 
Sbjct: 126 QSFGDDKLIMLGRIHGPNEAKRAAQLATNLHLRSFNLDLMHGLPSQTRDEGLSDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F          LP ++   D+Y     + +A G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTQFGSRPP----RLPDDDTLWDIYTEGHKLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +++     G  +
Sbjct: 242 AKAGYQCEHNLNYWRFGDYLGIGCGAHGKITSTDGQILRTVKTKHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQF 373
             +  + +E +  E+ M   RL E ++ +++    G   ++          +G+I     
Sbjct: 297 DNRYNVENEDRPFEYFMNRFRLLEAMTRREFTEYTGLAESVVRPAIDEALAKGYISETAD 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 357 E-WQITEHGKLFLNSLL-ELFL 376


>gi|300703569|ref|YP_003745171.1| coproporphyrinogen dehydrogenase [Ralstonia solanacearum CFBP2957]
 gi|299071232|emb|CBJ42550.1| Coproporphyrinogen dehydrogenase [Ralstonia solanacearum CFBP2957]
          Length = 425

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 138/387 (35%), Positives = 214/387 (55%), Gaps = 12/387 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            S  L +YVH P+CV+KCPYCDFNSH    + + +  F+ +   +++    +   R + +
Sbjct: 41  ASPPLSLYVHVPWCVRKCPYCDFNSHAEPDQGIPEARFLAAVRQDLEAALPMVWGRRVHT 100

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+  Q +  +L  I     V ++ EIT+EANP + E   F+ YR +GVNR+
Sbjct: 101 IFIGGGTPSLLSAQGLDTLLSDIRMLLPVDADAEITMEANPGTFEAERFRSYRASGVNRL 160

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  +  LR LGR H+A+EA AAI +AR  F  ++ DL++ALP QT+ + E +++ 
Sbjct: 161 SIGIQSFNDAHLRALGRIHSAAEARAAIDIARAHFDNINLDLMFALPGQTLAECEADVEA 220

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+   H+SLY LT+E  T F K        LP ++ A  + +   +  +A G   YE+
Sbjct: 221 ALSFETSHVSLYHLTLEPNTYFAKYPP----ALPDDDTAFGMQDWIHARLAAAGYEHYEV 276

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR--KN 311
           S ++  G    HNLNYW++GDY+GIGPGAH ++      +     +HPE++L+       
Sbjct: 277 SAYARPGKRCKHNLNYWQFGDYLGIGPGAHGKLSFPHRVLREMRHRHPETYLRQAETASG 336

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
              V E+  + +     EF++  LRL  G  V  ++   G  L    ER L   +++G +
Sbjct: 337 AAVVQEQREVDAADLPFEFMLNALRLTGGFPVTLFQERTGLPLR-AIERELDAAEQRGLL 395

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     +R T+ G   L+ + A    
Sbjct: 396 AR-DHVAIRPTELGQRFLNDLQALFLA 421


>gi|317493547|ref|ZP_07951968.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918490|gb|EFV39828.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 376

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 209/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++  +    ++   L ++      T  R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPSTEYVDHLLADLDADVAFTSGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  ++DG+     ++ N E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAEGMQRLMDGVRARLPLAPNAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H   EA  A HLA+ +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSAEKLTRLGRIHGPEEAKRAAHLAQGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----KLPDDDALWDIFQRGDELLRAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGYQCHHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTAKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  + ++ +  EF M   RL E     ++++  G     +  + +  L +   +E  +
Sbjct: 297 DKQHEVGNDDRPFEFFMNRFRLLEPTPRAEFQLYTGLGEAVIRAQLDEALSQNYIVETDE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
           +   + T+ G   L+S++  L +
Sbjct: 357 Y--WQITEHGKLFLNSLL-ELFL 376


>gi|330873955|gb|EGH08104.1| HemN family oxidoreductase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 404

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGAKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHE-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 ARLIATPQGQLFLNDLLQYFLI 404


>gi|320539541|ref|ZP_08039208.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Serratia symbiotica str. Tucson]
 gi|320030394|gb|EFW12406.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Serratia symbiotica str. Tucson]
          Length = 392

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 208/383 (54%), Gaps = 16/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   + ++     L G R IS++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLMADLNADLPLAGDREISTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     V+ + EIT+EANP +VE + F GY+ AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMQSLLDGVRSRIRVADDAEITMEANPGTVEADRFSGYQHAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H A EA  + HLA  +  R  + DL++ LP Q++     +L++A++
Sbjct: 126 QSFNAEMLIRLGRIHGAEEAKRSAHLATGLGLRSFNLDLMHGLPDQSLEDALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + S  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFSSRPP----VLPDDDALWDIFEQGHQLLSDAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  KHP  +++     G   
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKLTFSDGRILRTAKTKHPRGFMQ-----GKYR 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  +    +  EF M   RL E     D+    G     +  + E  L + G+++   
Sbjct: 297 DKQHEVVLADRPFEFFMNRFRLLEAAPRADFVNYTGLAESAIRAQLEEALMK-GYLKET- 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L++++    V
Sbjct: 355 PEYWQITEQGKLFLNALLELFLV 377


>gi|291618776|ref|YP_003521518.1| YggW [Pantoea ananatis LMG 20103]
 gi|291153806|gb|ADD78390.1| YggW [Pantoea ananatis LMG 20103]
          Length = 379

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L   R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEHDLPLIQGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+ +  T++++ E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRERLTLTADAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA+ +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLERLGRIHGPEEAKRAAVLAQGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----TLPDDDALWDIFEQGHQLLTAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKVRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQF 373
            ++  ++ E +  EF M   RL E     D+    G    L           G+I     
Sbjct: 297 DKQYDVADEDKPFEFFMNRFRLLEAAPRADFSRYTGLHETLIRPQLDEAIAAGYITE-SP 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T++G   L+S++  L +
Sbjct: 356 KHWQITEKGKLFLNSLL-ELFL 376


>gi|200388353|ref|ZP_03214965.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199605451|gb|EDZ03996.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 378

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G   
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDSRILRTTKTRHPRGYMQ-----GRYQ 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + TQ G   L+S++  L +
Sbjct: 356 QYWQITQHGKLFLNSLL-ELFL 376


>gi|311278128|ref|YP_003940359.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
 gi|308747323|gb|ADO47075.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
          Length = 377

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 130/384 (33%), Positives = 206/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + SIF
Sbjct: 3   KPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLADLDNETAYAQGRDVKSIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+
Sbjct: 63  IGGGTPSLLSGAAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVDYQRAGVNRISI 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  E  L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A
Sbjct: 123 GVQSFSEPKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQA 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S
Sbjct: 183 IALNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGH 313
            ++  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G 
Sbjct: 239 AYAKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTTKTRHPRGYMQ-----GR 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERV 371
            +  +  +    +  EF M   RL E     ++    G    +          QG++   
Sbjct: 294 YLENQRDVDDADKPFEFFMNRFRLLEPAPRAEFARYTGLCESVIRGQLDEAIAQGYLTE- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
                + T+ G   L+S++  L +
Sbjct: 353 DAQCWQITEHGKLFLNSLL-ELFL 375


>gi|315645951|ref|ZP_07899072.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           vortex V453]
 gi|315278712|gb|EFU42026.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           vortex V453]
          Length = 388

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 201/380 (52%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  KC YCDFNS+V + +   + ++ +   EM+   +   P  I SIF GGG
Sbjct: 10  AVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLHALDKEMELTVKANPPGIIKSIFVGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP++++P  +A  L  + +++   + ++E ++EANP + ++      R+ GVNRIS GVQ
Sbjct: 69  TPTVLKPNEMAYFLQSVRRHFPEWTEDIEFSMEANPGTTDLEKLSVMREGGVNRISFGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +   L  +GR H+  +   ++  AR   F  MS DL++ LP QT+      + +AL+ 
Sbjct: 129 AFQNSLLTGIGRIHDTDDVYRSLDNARQAGFDNMSIDLMFGLPNQTLEMLAESVDKALAL 188

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S+Y L +E+ TLF+ M++   L LP E   +++Y L      A G   YEISN +
Sbjct: 189 GLPHYSIYSLKVEENTLFHTMYQRNQLPLPDEEDELNMYLLLMERMKAAGYKQYEISNFA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN+ YWR  DY G+G GAH  V    H     +  + E+        G   +E
Sbjct: 249 KPGFESRHNMTYWRNEDYYGLGAGAHGYVGRQRHVNIKGVNPYNEA-----ANKGLPRLE 303

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
              +S E+  ++FLM+GLR+ +G+S   ++   G  ++ E  R L +    G ++  +  
Sbjct: 304 SFEVSREEAMEDFLMVGLRVLDGVSRTRFQQQFGVPMEQEFARPLDKMVGAGLLDSTEDG 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             + + +G+   + V A   
Sbjct: 364 Y-KLSSKGILFGNDVFAEFI 382


>gi|152980187|ref|YP_001353024.1| coproporphyrinogen III oxidase [Janthinobacterium sp. Marseille]
 gi|151280264|gb|ABR88674.1| oxygen-independent coproporphyrinogen III oxidase
           [Janthinobacterium sp. Marseille]
          Length = 414

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 129/388 (33%), Positives = 216/388 (55%), Gaps = 8/388 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            ++      L +YVH+P+CVKKCPYCDFNSH       ++ ++ +   +++    L   R
Sbjct: 32  ALSLTALPPLSLYVHFPWCVKKCPYCDFNSHEATGGFPEDEYLSALRADLEMALPLIWGR 91

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I +IF GGGTPSL+    +  +L  I     +   VEIT+EANP + E   F+ YR +G
Sbjct: 92  KIYTIFIGGGTPSLLSAAGLDRLLSDIRTLLPLDGAVEITMEANPGTFEAEKFKSYRASG 151

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+S+G+QS   + L  LGR HN  EA  A+ +A + F   + DL+YALP QT+ +  +
Sbjct: 152 INRLSIGIQSFNSRHLDALGRIHNGDEAQRAVDIAASNFDNFNLDLMYALPSQTLDEARL 211

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++Q A++YA  HLSLY LT+E  T+F K       V+P ++ + D+ ++ +  T A G  
Sbjct: 212 DVQTAIAYAPPHLSLYHLTMEPNTVFAKYPP----VVPDDDASADMQDMIEQETGAAGYQ 267

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+S ++    ++ HNLNYW++GDY+GIG GAH+++      +  +  K P+S+++ +R
Sbjct: 268 HYEVSAYAQPKRQARHNLNYWQFGDYLGIGAGAHTKLSFPHRVIRQARYKQPKSYMEQMR 327

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGF 367
             G+ + E++ ++  +   EF++  +RL EG+ V  +    G  L+         + +G 
Sbjct: 328 L-GNPIQEEKEITRSELGFEFMLNAMRLVEGVEVNMFAERTGMPLNAVERALNEAEAKGL 386

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           + R     ++ T  G   L+ +      
Sbjct: 387 LYR-DHKTIKPTVLGQRFLNDLQEMFLA 413


>gi|119382770|ref|YP_913826.1| coproporphyrinogen III oxidase [Paracoccus denitrificans PD1222]
 gi|119372537|gb|ABL68130.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Paracoccus denitrificans PD1222]
          Length = 394

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 170/380 (44%), Positives = 234/380 (61%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVHWPFC  KCPYCDFNSHV    + Q  ++ ++  E+  + + T  R ++SIF
Sbjct: 17  AGGFGLYVHWPFCAAKCPYCDFNSHVAAA-IEQGRWLAAYRAEIARLGRETPGRVLNSIF 75

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A +++     W  ++++EIT+EANP+SVE   F+ Y  AGVNR+S+
Sbjct: 76  FGGGTPSLMAPETVAGVIEAARAAWPFANDIEITLEANPTSVETGRFRAYADAGVNRVSM 135

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L +  LR LGR H+A EA AA  +AR+ F R+SFDLIYA   Q    W  EL  AL
Sbjct: 136 GVQALNDDDLRRLGRMHSAGEARAAFDIARDCFTRVSFDLIYARQDQDRAHWRRELGEAL 195

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             AVDHLS YQLTIE GT F   H  G L  LP ++++ D+Y  TQ I +A G+  YEIS
Sbjct: 196 GMAVDHLSAYQLTIEPGTAFGARHAKGGLKGLPDDDLSADMYLDTQEICAAAGMPTYEIS 255

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAES HNL YWR GD+  +GPGAH R+ + S R A      P +WL+ V   G+ 
Sbjct: 256 NHARPGAESRHNLIYWRQGDWAAVGPGAHGRLTLPSGRWATEAHLAPGAWLEAVEARGNG 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             ++E L    +A E+L+M +RL EG+ V  +    G  L  +   NL   G I  ++  
Sbjct: 316 DSQREMLGLSDRALEYLLMSMRLVEGLDVPRYLAH-GAELPQDRLMNLAELGLIS-LRGD 373

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T  G  +L++++  LA
Sbjct: 374 RLAATAAGRPVLNAILRELA 393


>gi|27364890|ref|NP_760418.1| HemN family oxidoreductase [Vibrio vulnificus CMCP6]
 gi|27361035|gb|AAO09945.1| coproporphyrinogen III oxidase-related protein [Vibrio vulnificus
           CMCP6]
          Length = 389

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 140/389 (35%), Positives = 209/389 (53%), Gaps = 14/389 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
             +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L     +++  +    PR +
Sbjct: 4   PPALSLYVHIPWCVQKCPYCDFNSHALKEQIPEQMYINALLEDLDRDIEKYQLHRAPRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI  + I  +L GI K    + ++EIT+EANP ++E   F GYRKAGV 
Sbjct: 64  HSIFIGGGTPSLISAEGIRDLLQGIEKRIPFTPSIEITMEANPGTIEAERFAGYRKAGVT 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP Q++ Q   +
Sbjct: 124 RISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  T+FY         LP ++   D++       +  G   
Sbjct: 184 LDKAIELNPPHLSWYQLTIEPNTMFYYKPP----ALPDDDQLWDIFERGHQKLTQAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +L   +
Sbjct: 240 YEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKIKHPKGYLAAHQ 299

Query: 310 KNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQG 366
                 ++ E L  E  +  EF M   RL E    +D+    G  L       +     G
Sbjct: 300 NMVKPYLDSEQLVEEIDRPFEFFMNRFRLMEACPKQDFIDTTGLPLSFIETTIQWAVEMG 359

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   + S  + T++G   L+ ++     
Sbjct: 360 YLNDNETS-WQITEKGKLFLNDLLEAFMA 387


>gi|238918242|ref|YP_002931756.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238867810|gb|ACR67521.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 215/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++ Q+ ++   L ++         R+IS++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPQQAYVDHLLADLDQELPRVAGRTISTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++++ EIT+EANP +VE   F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGEALQHLLDGVRARLPLAADAEITMEANPGTVEAERFSAYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EAIAA  LAR +  R  + DL++ LP+Q+  +   +L++A++
Sbjct: 126 QSFSADKLQRLGRIHGPQEAIAAARLARTLGLRSFNLDLMHGLPQQSREEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   +++     +    G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----RLPDDDALWEIFEQGDRLLRESGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G+ +
Sbjct: 242 ALPGRQCQHNLNYWRFGDYLGIGCGAHGKLTFADGRIERHAKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            +++ ++  ++  EF M   RL E     D+    G +   +  + E  L  QG+I R  
Sbjct: 297 DQRQQVAMAERPFEFFMNRFRLLEPAPRADFSAYTGVDQATIRPQLEAALT-QGYI-RET 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S  + T  G   L+S++  L +
Sbjct: 355 PSHWQVTPHGKLFLNSLL-ELFL 376


>gi|197249679|ref|YP_002148018.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197213382|gb|ACH50779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 378

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDADVVWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+     +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEGALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 QYWQITRHGKLFLNSLL-ELFL 376


>gi|268593076|ref|ZP_06127297.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rettgeri DSM 1131]
 gi|291311345|gb|EFE51798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rettgeri DSM 1131]
          Length = 379

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + ++ Q+ ++   L ++    +L   RS+ +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHTLKGEIPQQEYVAHLLADLDIDAKLVAGRSVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +++  ++DG+ +   +  + E+T+EANP +VE   F GY+ AG+NRIS+GV
Sbjct: 66  GGTPSLLSAESMQALMDGVRQRVDLDPHAEVTMEANPGTVEAGRFAGYQAAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H A EA  A  LA N+  R  + DL++ LP QT  +   +L++A+ 
Sbjct: 126 QSFGNDKLITLGRIHGADEAKRAAQLATNLNLRSFNLDLMHGLPAQTQVEGLSDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F         VLP ++   D+Y     + SA G   YE S +
Sbjct: 186 LAPPHLSWYQLTIEPNTQFGSRPP----VLPDDDTLWDIYTEGHKLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     ++  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKISFEDGQILRTVKTKHPRGYME-----GRYM 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            +   + +  +  E+ M   RL E +   ++    G               +G+I     
Sbjct: 297 HQSYDVDASDRPFEYFMNRFRLLEAMPRAEFTQYTGLPESTVRAAIDEALAKGYITET-V 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           ++ + T+ G   L+S++  L +
Sbjct: 356 NKWQITEHGKLFLNSLL-ELFL 376


>gi|56461080|ref|YP_156361.1| hypothetical protein IL1980 [Idiomarina loihiensis L2TR]
 gi|56180090|gb|AAV82812.1| Uncharacterized Fe-S oxidoreductase [Idiomarina loihiensis L2TR]
          Length = 383

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 208/382 (54%), Gaps = 13/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     V + +++   L +++        R I SIF G
Sbjct: 9   PLSLYIHIPWCIQKCPYCDFNSHKLTGDVPEASYVGRLLEDLRADIDWVQGREIQSIFIG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++  + I  ++DG+     +S + E+T+EANP + E   F  +  AG+NR+S+GV
Sbjct: 69  GGTPSVLSAKAIQQLMDGVRSIVALSPDCEVTMEANPGTFETEKFSAFVAAGINRLSIGV 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL+E  L+ LGR HN  +AI A   A  +     + DL++ LP QT+     +L++ ++
Sbjct: 129 QSLQEHQLQRLGRIHNPQQAINAAAHASELPLSSFNLDLMHGLPDQTVEMALDDLRQIIA 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLF          LP ++   ++Y     +  A G   YE+S +
Sbjct: 189 LNPPHISWYQLTIEPNTLFASQPP----ELPDDDTLWEIYQQGHKLLEAAGYSQYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +S HN NYW+YGDY+GIG GAHS+V +      +  E  KHP+ +L + +   + 
Sbjct: 245 AKPGHQSRHNRNYWQYGDYLGIGCGAHSKVTLPQQNKILRCEKVKHPKGYLDLTKPLRYQ 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           + E   ++ E +  EF M   RL E +S  ++E     + ++   + L     +E V   
Sbjct: 305 LKE---VAVEDRLFEFFMNQFRLLEPVSKSNFEQTTALSAEV-ASKQLTEAKTLELVTED 360

Query: 375 RL--RCTQRGMTMLDSVIANLA 394
            L  + TQRG   L+SV+  L 
Sbjct: 361 ELNWQLTQRGHRFLNSVLDTLL 382


>gi|28872166|ref|NP_794785.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28855420|gb|AAO58480.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 404

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 208/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTSEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHE-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 ARLIATPQGQLFLNDLLQYFLI 404


>gi|331648710|ref|ZP_08349798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
 gi|330908990|gb|EGH37504.1| radical SAM family enzyme [Escherichia coli AA86]
 gi|331042457|gb|EGI14599.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
          Length = 378

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEEVIRPQLEEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|317049431|ref|YP_004117079.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
 gi|316951048|gb|ADU70523.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
          Length = 379

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 134/384 (34%), Positives = 213/384 (55%), Gaps = 18/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    LT  R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHIEYVQHLLHDLEQDLPLTSGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+     ++++ EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSNAMQMLMDGVRARLPLAADAEITMEANPGTVEADRFSGYQQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLERLGRIHGPEEAQRAAHLAAGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LHPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  ++K     G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKTRHPRGFMK-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERV 371
            ++  ++   +  EF M   RL E     D+    G  L+    R         G++   
Sbjct: 297 DKQHDVADADKPFEFFMNRFRLLEAAPRADFCRYTG--LEEAVIRPQIDAAIAAGYVLET 354

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +    + T++G   L+S++    V
Sbjct: 355 E-QHWQITEKGKLFLNSLLELFLV 377


>gi|320195074|gb|EFW69703.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327]
          Length = 378

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFNEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|146313000|ref|YP_001178074.1| coproporphyrinogen III oxidase [Enterobacter sp. 638]
 gi|145319876|gb|ABP62023.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter sp. 638]
          Length = 380

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVSYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H ++EA  A HLA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEPKLKRLGRIHGSAEAKRAAHLATGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----KLPDDDALWDIFEQGHQMLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  +  E +  EF M   RL E     ++    G +  +          QG++     
Sbjct: 297 ERQHDVEVEDKPFEFFMNRFRLLEPAPRAEFARYTGLSESVIRPQINEALAQGYLTECDA 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 357 -FWQITEHGKLFLNSLL-ELFL 376


>gi|297544377|ref|YP_003676679.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296842152|gb|ADH60668.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 375

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 208/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDFNS+   Y    E++I++ L E++     T   ++ S++ 
Sbjct: 2   KEIGLYIHIPFCKRKCYYCDFNSYAG-YDYLFEDYIRALLMEIE--SNSTKDYNVVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  I +IL  + K + +  + EITIE NP  +     + Y+  G+NR+S+G
Sbjct: 59  GGGTPNLLPPYYIEVILKSVFKYYKLVDDCEITIEMNPGLITEEKLEIYKVNGINRVSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L+++GR H   E +    L +  F  ++ DL+YALP QT  +W+  L+  + 
Sbjct: 119 LQAFQNRLLKYIGRIHTIEEFLENYELVKKFFDNINIDLMYALPTQTFKEWQETLKEVVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L +E  T FYK+++ G L +  E   + +Y+         G H YEISN 
Sbjct: 179 LQPTHISTYSLILEPNTSFYKLYEKGQLPVVDEEKELSMYHWGIEFLKEKGYHHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HN+ YW+  +Y+G G GAHS ++   +          + ++K + +   AV 
Sbjct: 239 ALPTFECRHNILYWQCKNYLGFGAGAHSYMEDVRYSNIEGT----KDYIKGILERKSAVK 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQF 373
           EK  L+ + +  EF+ +GLR+ +G+  KD++ +   +L    ++ +Q   ++G I +V  
Sbjct: 295 EKIKLTKQDRMAEFMFLGLRMTKGVCDKDFKKIFDVSLFEIYKKVIQKYLKEGLI-KVDN 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             ++ T+RG+ + + +     
Sbjct: 354 ECVKLTERGIDVSNVIFEEFL 374


>gi|269838405|ref|YP_003320633.1| oxygen-independent coproporphyrinogen III oxidase [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787668|gb|ACZ39811.1| oxygen-independent coproporphyrinogen III oxidase [Sphaerobacter
           thermophilus DSM 20745]
          Length = 393

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 139/386 (36%), Positives = 208/386 (53%), Gaps = 12/386 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               LGVY+H PFC + CPYCDFN++ R+  +  E ++++ + EM       GPR   SI
Sbjct: 7   ADAPLGVYIHIPFCTRICPYCDFNTYARQEHLIPE-YVEALIGEMDLTLAAIGPRPAQSI 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P+ +A ++D + + + +  + E+++EANP +++     G+ +AGVNRIS
Sbjct: 66  FFGGGTPSLLPPELVARLIDAVRERFPLPDDAEVSLEANPETIDAATLDGFLQAGVNRIS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ + + L+ LGR H       A+  AR       S D I+  P QTM +WE +L  
Sbjct: 126 LGVQTQQARGLKVLGRAHKPDVPERALAAARAAGVDNFSVDFIFGWPNQTMAEWEDDLDS 185

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L +  DHLSLY L +E GT + +  + G L +P E+   D+Y       +A G H YEI
Sbjct: 186 ILRWQPDHLSLYSLIVEPGTPYERAVQRGILTVPDEDTTADMYERALDRLAAAGWHHYEI 245

Query: 254 SNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN +      S HNL YWR G Y+G+G GAH+ +      V  S  + P  ++  VR+  
Sbjct: 246 SNWARTPEHRSRHNLLYWRNGHYLGLGAGAHAHLDN----VRSSNIRLPAKYIAAVREGR 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECERNLQRQ---GFI 368
             + E+E L       E +M+GLRL  EG+S   +    GR L+    R L      G +
Sbjct: 302 LPIDEREELDETTAMAETMMLGLRLPEEGVSAAAFAARHGRELEEIYGRELTDLTDAGLL 361

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
                + +R T+RG+ + + V A   
Sbjct: 362 -YWDGAHVRLTRRGLLLANEVAARFL 386


>gi|85374027|ref|YP_458089.1| coproporphyrinogen III oxidase [Erythrobacter litoralis HTCC2594]
 gi|84787110|gb|ABC63292.1| coproporphyrinogen III oxidase [Erythrobacter litoralis HTCC2594]
          Length = 383

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 179/379 (47%), Positives = 236/379 (62%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+HWPFC KKCPYCDFNSHV R  V    + ++ L +M++     G  +++SIFFGGG
Sbjct: 4   ALYIHWPFCAKKCPYCDFNSHV-RASVDHALWERAMLADMRYEAGKAGGEALTSIFFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P  +A +L    + W  + ++EIT+EANPSSVE  NF     AGVNR+SLGVQS
Sbjct: 63  TPSLMPPALVASLLQQAERLWGFAPDIEITLEANPSSVETANFHALAAAGVNRVSLGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L++ +LRFLGR H   EA+ A+  A+  F R+SFDLIYALP QT + W   L+RALS+  
Sbjct: 123 LDDAALRFLGRLHGVEEALTALETAQKAFQRVSFDLIYALPDQTESDWRAGLERALSFGT 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLSLYQLTIE GT F    + G     +++ A DLY +TQ++T++ GL AYEISNH+  
Sbjct: 183 SHLSLYQLTIEPGTRFATDVRRGVFDPLADDPAADLYTVTQAVTASAGLPAYEISNHARP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HNL YWRY DY GIGPGAH R        A    K PE+WL  V + G    E+ 
Sbjct: 243 GEESRHNLTYWRYHDYCGIGPGAHGR----RGGFATLRHKKPENWLAAVDECGSGAQEER 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFSR 375
            LS  +QA E L+MGLRL  G+ ++      G      +D +  +   + G IE V   R
Sbjct: 299 RLSPAEQASEALVMGLRLAAGVDLETLSARFGIGEVSLIDPDKRQLYSQLGLIEHV-NER 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T +GM +LD+++  L 
Sbjct: 358 LRVTAKGMPLLDALLGELV 376


>gi|213971467|ref|ZP_03399579.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
 gi|301383506|ref|ZP_07231924.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061939|ref|ZP_07253480.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           K40]
 gi|302134686|ref|ZP_07260676.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213923749|gb|EEB57332.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
          Length = 404

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD      R  +++G +   Q 
Sbjct: 324 AGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAGARRQAEQKGLLHEDQA 383

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RL  T +G   L+ ++    +
Sbjct: 384 -RLIATPQGQLFLNDLLQYFLI 404


>gi|224584897|ref|YP_002638696.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469425|gb|ACN47255.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 378

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVVWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 297 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+ ++  L +
Sbjct: 356 QYWQITRHGKLFLNYLL-ELFL 376


>gi|300925049|ref|ZP_07140967.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 182-1]
 gi|301027720|ref|ZP_07191030.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 196-1]
 gi|299879156|gb|EFI87367.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 196-1]
 gi|300418795|gb|EFK02106.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 182-1]
          Length = 378

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|332970354|gb|EGK09346.1| oxygen-independent coproporphyrinogen III oxidase [Kingella kingae
           ATCC 23330]
          Length = 386

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 215/380 (56%), Gaps = 7/380 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  +  + +  +IQ+ LT++Q        R I +IF G
Sbjct: 11  PLSLYIHIPWCIQKCPYCDFNSHKIKTTLDENAYIQALLTDLQSELPYFWGRPIDTIFIG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+   + I  +L GI     ++   EIT+EANPS+ E++ FQG++ AG+NR+S+GV
Sbjct: 71  GGTPSVFSAKAIDQLLSGIRALVKLNPETEITLEANPSTFEIDKFQGFKDAGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR HNA EA  AI +A  IF R++ DL+YALP QT+     +++ A+++
Sbjct: 131 QSFDDAKLKTLGRIHNAHEAKNAIEVATQIFERVNIDLMYALPHQTVQAACDDIRTAIAF 190

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLT+E  T F          LP ++ A D+ +   +  +  G   YE S  +
Sbjct: 191 GTTHISAYQLTLEPNTPFGHTPPQ---GLPEDDNAQDIEDAIHAELAQAGFVQYETSAFA 247

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                ++ HN+NYW++GDYIGIG GAH ++         + ++HP  +L  ++ N H  +
Sbjct: 248 KSPNQQARHNVNYWQFGDYIGIGAGAHGKLSHHDRIERTTRKRHPSDYLLAMQTNPHDAI 307

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E++ ++ +    EF+M  LRL +G+    +    G ++    +  +  Q++G ++     
Sbjct: 308 ERKMVAPQDLPFEFMMNALRLVDGVPSAYFGERTGVSVAKISQQIKIAQQRGLLDSNPM- 366

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             R T  G   L+ +I    
Sbjct: 367 FFRPTDLGRRFLNDLIEIFL 386


>gi|296114823|ref|ZP_06833472.1| coproporphyrinogen III oxidase [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978637|gb|EFG85366.1| coproporphyrinogen III oxidase [Gluconacetobacter hansenii ATCC
           23769]
          Length = 407

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 173/394 (43%), Positives = 234/394 (59%), Gaps = 11/394 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
              G  +L +YVHWPFC+ KCPYCDFNSHV R  + Q  F  +   E+       G    
Sbjct: 15  APNGGEALALYVHWPFCLSKCPYCDFNSHV-RDVIPQARFGNALRRELAHEAARIGTARD 73

Query: 71  ----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               + SIFFGGGTPSL+EP  +A ++      + +S ++EIT+EANP+SVE    + +R
Sbjct: 74  TRPVLGSIFFGGGTPSLMEPATVAALIGDAGHLFRLSPDIEITLEANPTSVETARLRAFR 133

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             GVNRIS+G+QSL+ ++LRFLGR H   +AIAA+  AR +F R+SFDLIYA P+Q++  
Sbjct: 134 DGGVNRISVGLQSLDPEALRFLGREHTVPQAIAALEQARALFGRISFDLIYARPEQSLAS 193

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  EL  AL  A DHLSLYQLTIE GT F  +++     LP +++A  LY  T  + + H
Sbjct: 194 WRGELDAALDLASDHLSLYQLTIEPGTRFESLYRQNRFHLPDDDLAARLYEETARVAARH 253

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YE+SN++  GAES HNL YWRYGDY+GIGPGAH RV       A    + PE W +
Sbjct: 254 GLLGYEVSNYARPGAESRHNLTYWRYGDYLGIGPGAHGRVTRDGVTYATRRHRAPEPWAE 313

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNL 362
            V + G     ++ LS  ++A E L+MGLRL EGI+   +    G +L    D    +  
Sbjct: 314 RVERTGTGTTHEDALSPREKAREMLLMGLRLDEGIAAGRFARRTGMSLGDATDPGILQAA 373

Query: 363 QRQGFIERVQFS-RLRCTQRGMTMLDSVIANLAV 395
             + ++       RLR T  G   L+S++A L V
Sbjct: 374 LEEDYLRWDAGGARLRATAEGRLRLESLLAALVV 407


>gi|253574644|ref|ZP_04851984.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251845690|gb|EES73698.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 412

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 126/389 (32%), Positives = 202/389 (51%), Gaps = 12/389 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +G       VY+H PFC  KC YCDFNS+V + +   + ++++   EM+   Q T P  I
Sbjct: 25  SGPSGAPHAVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLRALDREMELTVQQTPPGEI 83

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            SIF GGGTP+++ PQ +   L  + +++   +S++E T+EANP + + +     +  GV
Sbjct: 84  RSIFVGGGTPTVLTPQEMEFFLASVRRHFPYWASDIEFTMEANPGTTDRDKLTVMKDGGV 143

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ+ + + L  +GR HN  +   ++  AR +    +S DL++ LP QT+   + 
Sbjct: 144 NRVSFGVQAFQNELLSGIGRIHNTDDVYRSLENARAVGLDNLSIDLMFGLPNQTVEMLDY 203

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            + RAL   + H S+Y L +E+ TLF+ ++    L LPSE   +++Y L        G  
Sbjct: 204 SVSRALELGLPHYSIYSLKVEENTLFHTLYHKNQLPLPSEEEELNMYLLLMERMEQAGYK 263

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G  S HN+ YW+  DY G+G GAH  V    H     +  + E+      
Sbjct: 264 QYEISNFAKPGFASRHNITYWKNEDYYGLGAGAHGYVGRTRHVNIKGVNPYVEA-----A 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           K G   +E+  +S E+  ++F+M+GLR+  GI   D+    G  LD    R L +    G
Sbjct: 319 KTGLPRLEQFGVSREEAMEDFVMVGLRMLNGIRKADFRRQFGEELDDVFARQLTKMLSAG 378

Query: 367 FIER-VQFSRLRCTQRGMTMLDSVIANLA 394
            +E        R +++G+   + V A   
Sbjct: 379 LLEPHSDGEGYRLSKQGVLFGNEVFAEFI 407


>gi|332305441|ref|YP_004433292.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172770|gb|AEE22024.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 407

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 211/386 (54%), Gaps = 17/386 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            + +Y+H P+CV+KCPYCDFNSH ++   + +  ++   L ++    QL G R++ SIF 
Sbjct: 30  PVSLYIHIPWCVQKCPYCDFNSHGQKQATLPEAEYVSHLLDDLAHDAQLIGDRAVHSIFI 89

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P+ I  +L G+ +   ++++ EIT+EANP +VE   F+G+ KAGVNRIS+G
Sbjct: 90  GGGTPSLFSPEAIGRLLSGVRQRVNLAADAEITLEANPGTVESERFKGFAKAGVNRISIG 149

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +++ L  LGR H+  +A+ A   AR+      + DL++ LP+Q++     +L++ +
Sbjct: 150 VQSFQQEKLERLGRIHDEQQALNAASYARDAGLNSFNLDLMHGLPEQSIEDALFDLRQGI 209

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLS YQLTIE  T F+         LP +++  D+      +  A G   YEIS 
Sbjct: 210 DQQPPHLSWYQLTIEPNTQFHSKPP----TLPEDDILWDIQEQGHDMLIAAGYEQYEISG 265

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAISIEKHPESWLKMVRKNGH 313
           +S  G +  HNLNYWR+GDY+GIG GAH ++  K     +     KHP+ ++ + R   H
Sbjct: 266 YSLAGQQCRHNLNYWRFGDYLGIGCGAHGKITMKDTGQILRTVKVKHPKGYMDLTRPYLH 325

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-----ERNLQRQGFI 368
              ++  +  E+   EF M  LRL E    +D+    G  L+ +           ++G +
Sbjct: 326 ---QQHNVQDEELPFEFFMNRLRLLEPCPKQDFTDFTGLKLEEQTTLATNIATAVKKGLL 382

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
                +  + T  G   L+S++  L 
Sbjct: 383 AETD-THWQVTPFGRRYLNSLLEMLV 407


>gi|332535501|ref|ZP_08411279.1| radical SAM family enzyme [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035078|gb|EGI71594.1| radical SAM family enzyme [Pseudoalteromonas haloplanktis ANT/505]
          Length = 378

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 199/383 (51%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH ++ ++ +  ++Q  + +++    L   R I SIF G
Sbjct: 5   PLSLYVHVPWCVQKCPYCDFNSHGQKGEIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +L+ +     +  + EIT+EANP +VE   F+ Y KAG+NRIS+GV
Sbjct: 65  GGTPSLLTGAAYTRLLNEVDNLIGLEEHCEITLEANPGTVETGRFKDYVKAGINRISIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS++   L+ LGR H + EA  A   A+       + DL++ LP QT+     +L++ ++
Sbjct: 125 QSMQNDKLKALGRIHGSDEANYAAQQAKEAGLNSFNLDLMHGLPGQTLDDALSDLKQIIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T F          LP +    D+      + +  G   YEIS +
Sbjct: 185 LDPPHISWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGVELLAQAGYVQYEISGY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH +V   +  +    E  KHP  ++ +++     
Sbjct: 241 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTDANTGLITRTEKVKHPRGYMDLIK---PY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           + +   +  +  A EF M   RL E   + D+  L    L  +         +G + +  
Sbjct: 298 MYKSWHVEQDDLAFEFFMNRFRLVEPCPINDFNKLTTLPLQSQQSALNQAINKGLLTQTD 357

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S  + T +G   L+ ++  L V
Sbjct: 358 -SHWQVTLKGHRFLNDLL-ELFV 378


>gi|261250158|ref|ZP_05942734.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           orientalis CIP 102891]
 gi|260939274|gb|EEX95260.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           orientalis CIP 102891]
          Length = 391

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 139/394 (35%), Positives = 211/394 (53%), Gaps = 14/394 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--- 67
           M+     +L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L +++   +      
Sbjct: 1   MSRLIPPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEQEYIAALLQDLEADIERYQLND 60

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            PR + SIF GGGTPSLI  + IA +L GI        ++EIT+EANP ++E   F GY+
Sbjct: 61  NPRLLHSIFIGGGTPSLISAEGIANLLAGIEARLPFKPDIEITMEANPGTIEAERFAGYQ 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMT 185
           KAGV RIS+GVQS E+  L  LGR H   EA+ A  LA  I     + DL++ LP Q++ 
Sbjct: 121 KAGVTRISVGVQSFEQTKLERLGRIHGQDEAVKAAKLAHQIGLKSFNLDLMHGLPDQSVD 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q   +L++A+     HLS YQLTIE  T+FY         LP ++   D++ L     + 
Sbjct: 181 QALADLEKAIELDPPHLSWYQLTIEPNTMFY----YKQPTLPDDDDLWDIFELGHKKLAE 236

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESW 304
            G   YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP+ +
Sbjct: 237 AGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFSDGRIVRTTKIKHPKGY 296

Query: 305 LKMVRKNGHAVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           L          +  +E ++ + +  EF M   RL E    +D+    G   +   E    
Sbjct: 297 LAAYDNMVKPYLNSEEHVADQDRPFEFFMNRFRLIEACPKQDFLDTTGLGFEAVQETIDW 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               G+I+    S  + T++G   L+ ++     
Sbjct: 357 TIEMGYIDESD-SHWQITEKGKLFLNDLLEAFMA 389


>gi|156932603|ref|YP_001436519.1| coproporphyrinogen III oxidase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530857|gb|ABU75683.1| hypothetical protein ESA_00385 [Cronobacter sakazakii ATCC BAA-894]
          Length = 378

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 209/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLRDLDNDAPWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+    T++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLTLAPDAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L+ A++
Sbjct: 126 QSFSEPKLARLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLREAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYAQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V +   R+   +  +HP  ++      G+ +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTLADGRILRTAKTRHPRGYM-----TGNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  + ++ +  EF M   RL E     ++    G +   +  + +  +     +E  +
Sbjct: 297 DKQHEVEAQDKPFEFFMNRFRLLEPAPRAEFARYTGLSEAAIRTQIDEAIALNYLVETPE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T+ G   L+S++  L +
Sbjct: 357 S--WQITEHGKLFLNSLL-ELFL 376


>gi|311069151|ref|YP_003974074.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
 gi|310869668|gb|ADP33143.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
          Length = 379

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 185/380 (48%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ S   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNSLEKEMINTVAKTGQPKLDTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  ++D + +     S   E  +EANP  +     +  + AGVNR+S GVQ
Sbjct: 62  TPTSLSEAQLEKLMDIVHRVLKPSSPLPEFAVEANPDDLSAEKLKVLKDAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L+ +GR H   +   +   AR   F  +S DL++ LP QT+   +  LQ ALS 
Sbjct: 122 TFEDDLLKKIGRVHKKKDVFTSFERARALGFENISLDLMFGLPGQTLEHLDQSLQTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP+++   ++Y L     S   +H YEISN +
Sbjct: 182 NAEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQDQEAEMYELVMRQMSDANIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  +       A  +    + ++ ++ + G    +
Sbjct: 242 KPGLESKHNLTYWSNEDYFGFGAGAHGYINGVRTVNAGPV----KHYIDLINEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              ++ E+Q +E L +GLR   G+S K +    G +LD       R L  +G I   + S
Sbjct: 298 THEVTKEEQIEEELFLGLRKTAGVSKKRFFEKYGCSLDELFAHVLRGLSDKGLIHNTESS 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T  G  + + V     
Sbjct: 358 -VSLTHNGKLLGNEVFGAFL 376


>gi|283835284|ref|ZP_06355025.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citrobacter youngae ATCC 29220]
 gi|291068442|gb|EFE06551.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citrobacter youngae ATCC 29220]
          Length = 378

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 135/382 (35%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDSEVAHAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE N F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLKLAADAEITMEANPGTVEANRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A HLA  +  R  + DL++ LP QT+ +   +LQ+A++
Sbjct: 126 QSFSSAKLERLGRIHGPEEAKRAAHLASGLGLRSFNLDLMHGLPDQTLDEALGDLQQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  ++   +  EF M   RL E     ++    G   D+  ++      QG++     
Sbjct: 297 ESQRDVAEADKPFEFFMNRFRLLEAAPRAEFTQYTGLAEDVIRQQIDEAIAQGYLSECD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + TQ G   L+S++  L +
Sbjct: 356 EYWQITQHGKLFLNSLL-ELFL 376


>gi|170681312|ref|YP_001745116.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170519030|gb|ACB17208.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli SMS-3-5]
          Length = 378

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQSREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFLDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVDAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLEEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|237729886|ref|ZP_04560367.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
 gi|226908492|gb|EEH94410.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
          Length = 382

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 10  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDTEVAHARGREVKTIFIG 69

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 70  GGTPSLLSGPAMQTLLDGVRARLNLAEDAEITMEANPGTVEADRFVDYQRAGVNRISIGV 129

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A HLA  +  R  + DL++ LP QT+ +   +LQ+A++
Sbjct: 130 QSFSSAKLERLGRIHGPEEAKRAAHLASGLGLRSFNLDLMHGLPDQTLEEALGDLQQAIA 189

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 190 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 245

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G  +
Sbjct: 246 ARPGYQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTTKTRHPRGYMQ-----GRYL 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  ++   +  EF M   RL E     ++    G   D+   +      QG++     
Sbjct: 301 ESQRDVAEADKPFEFFMNRFRLLEAAPRAEFTQYTGLTEDVIRRQIDEAISQGYLSECD- 359

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + TQ G   L+S++  L +
Sbjct: 360 EYWQITQHGKLFLNSLL-ELFL 380


>gi|15603534|ref|NP_246608.1| coproporphyrinogen III oxidase [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12722075|gb|AAK03753.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 384

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL----TGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++   RQ        RS+ S
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHAQKGHIPEQDYIAHLLQDLHQDRQRFQDSIQDRSLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L G+A+      ++EIT+EANP + E   F+GY +AGV RI
Sbjct: 68  IFIGGGTPSLFSAEGIHTLLSGVAQCLPFQPDIEITLEANPGTAEAERFKGYVQAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L  LGR HNA EA +A+  A+       + DL++ LP QT+ +   +LQ
Sbjct: 128 SMGIQSFNDDKLVRLGRIHNAQEAKSAVGFAKLSGLKSFNLDLMHGLPNQTLEEALSDLQ 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T+F         VLP ++   D++     + +  G   YE
Sbjct: 188 QAIALEPPHLSWYQLTIEPNTMFAYRPP----VLPDDDALWDIFEQGHQLLTEAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++     
Sbjct: 244 TSAYAKPAFQCRHNLNYWRFGDYLAIGCGAHGKITQPNGEIKRYSKTKHPKGYMR----- 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFI 368
           G  + E++ +++E  A EF M   RL E +   D+  L G    ++  + +  L ++  +
Sbjct: 299 GDYLYEEKTVATEDLAFEFFMNRFRLLEAVPKTDFTRLTGLCEESIQPQIQWALAKKYLV 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E       + T++G   L+ ++A   
Sbjct: 359 ETEVA--WQVTEQGKLFLNELLAEFL 382


>gi|152971907|ref|YP_001337016.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956756|gb|ABR78786.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 378

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPNQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G               QG+++  + 
Sbjct: 297 ERQHDVEEADKPFEFFMNRFRLLEAAPRAEFSRYTGLEEAAIRPQLDAAIAQGYLQEDEQ 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + T+ G   L+S++  L +
Sbjct: 357 N-WQITEHGKLFLNSLL-ELFL 376


>gi|218701665|ref|YP_002409294.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|301027294|ref|ZP_07190640.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 69-1]
 gi|312964782|ref|ZP_07779022.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 2362-75]
 gi|218371651|emb|CAR19490.1| putative oxidoreductase [Escherichia coli IAI39]
 gi|300395100|gb|EFJ78638.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 69-1]
 gi|312290338|gb|EFR18218.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 2362-75]
          Length = 378

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|269127462|ref|YP_003300832.1| oxygen-independent coproporphyrinogen III oxidase [Thermomonospora
           curvata DSM 43183]
 gi|268312420|gb|ACY98794.1| oxygen-independent coproporphyrinogen III oxidase [Thermomonospora
           curvata DSM 43183]
          Length = 403

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 127/396 (32%), Positives = 192/396 (48%), Gaps = 22/396 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
           E+ + G G+     YVH PFCV +C YCDFN++          ++++  + + E++  R+
Sbjct: 19  ESALDGLGARPFACYVHVPFCVTRCGYCDFNTYTAAELGPGASRDSYADAAIAELRLARR 78

Query: 65  LTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G     + ++FFGGGTP+L+ P  +  IL  I   + ++   E+T EANP SV+    
Sbjct: 79  VLGQTDLPVRTVFFGGGTPTLLPPGELGRILAAIDAEFGLAPGAEVTTEANPESVDEGYL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R AG  RIS G+QS     L  L R H        +  AR   F +++ DLIY  P 
Sbjct: 139 EQLRAAGFTRISYGMQSARPHVLAALDRVHTPGRIPQVVRWARKAGFEQVNLDLIYGTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W   L  AL    DH+S Y L +E+GT      + G+L  P ++   D Y + + 
Sbjct: 199 ESAADWRASLLAALETEPDHISAYALIVEEGTRLAARVRRGELAAPDDDAMADRYLMAEE 258

Query: 242 ITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + SAHGLH YEISN +    A   HNL YW   D+ GIGPGAHS V            KH
Sbjct: 259 LLSAHGLHWYEISNWARGPHAACRHNLLYWTGADWWGIGPGAHSHVGGTR----WWNVKH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P ++   +         +E L++ ++  E +M+ LRL EG   +         L+    R
Sbjct: 315 PAAYAARLAGGRSPAHAREVLTAAERRLERIMLELRLAEGCPAEL--------LEDAAVR 366

Query: 361 NLQRQGFIERVQF---SRLRCTQRGMTMLDSVIANL 393
                G +E   +    R   T RG  + D+V+ +L
Sbjct: 367 RAIADGLVEEEPYFGRGRAVLTLRGRLLADAVVRDL 402


>gi|161506344|ref|YP_001573456.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160867691|gb|ABX24314.1| hypothetical protein SARI_04541 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 378

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT  +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTQEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +  G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTTAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFLDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  ++   +  EF M   RL E     ++    G + D   ++      QG++   + 
Sbjct: 297 ESQRDVAQADKPFEFFMNRFRLLERAPRAEFVEYTGLSEDTIRQQMDEAIAQGYLIENKD 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           S  + TQ G   L+S++  L +
Sbjct: 357 S-WQITQHGKLFLNSLL-ELFL 376


>gi|110643104|ref|YP_670834.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|191171779|ref|ZP_03033325.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli F11]
 gi|110344696|gb|ABG70933.1| hypothetical protein YggW [Escherichia coli 536]
 gi|190907814|gb|EDV67407.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli F11]
 gi|324011794|gb|EGB81013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 60-1]
          Length = 378

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|221310474|ref|ZP_03592321.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221314798|ref|ZP_03596603.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221319720|ref|ZP_03601014.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. JH642]
          Length = 377

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T +G  + + V     
Sbjct: 357 AVYLTHQGKLLGNEVFGAFF 376


>gi|315169986|gb|EFU14003.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1342]
          Length = 382

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 196/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A +    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAEDVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|288933575|ref|YP_003437634.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
 gi|288888304|gb|ADC56622.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
          Length = 378

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYIE-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G               QG+++  + 
Sbjct: 297 ERQHDVEEADKPFEFFMNRFRLLEAAPRAEFRRYTGLEEAAIRPQLDAAIAQGYLQEDEQ 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + T+ G   L+S++  L +
Sbjct: 357 N-WQITEHGKLFLNSLL-ELFL 376


>gi|91212337|ref|YP_542323.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117625182|ref|YP_854170.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218559946|ref|YP_002392859.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|237706392|ref|ZP_04536873.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|91073911|gb|ABE08792.1| hypothetical protein YggW [Escherichia coli UTI89]
 gi|115514306|gb|ABJ02381.1| putative coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218366715|emb|CAR04472.1| putative oxidoreductase [Escherichia coli S88]
 gi|226899432|gb|EEH85691.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|294493400|gb|ADE92156.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli IHE3034]
 gi|307625471|gb|ADN69775.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315289497|gb|EFU48892.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 110-3]
 gi|323951607|gb|EGB47482.1| radical SAM superfamily protein [Escherichia coli H252]
 gi|323957321|gb|EGB53043.1| radical SAM superfamily protein [Escherichia coli H263]
          Length = 378

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           S  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 SKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLEEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|331664538|ref|ZP_08365444.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
 gi|331058469|gb|EGI30450.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
          Length = 378

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + ++LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQMLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|256618883|ref|ZP_05475729.1| coproporphyrinogen III oxidase [Enterococcus faecalis ATCC 4200]
 gi|256598410|gb|EEU17586.1| coproporphyrinogen III oxidase [Enterococcus faecalis ATCC 4200]
          Length = 382

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 198/380 (52%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T  +    G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEVMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|297194439|ref|ZP_06911837.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718752|gb|EDY62660.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 413

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 198/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G  +  L  Y+H P+C  +C YCDFN++      G       ++N+ Q+   E++
Sbjct: 22  ASALHGAEARPLAFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYAQTLADEVR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +LD + + + ++ + EIT EANP SV+
Sbjct: 82  LARKVLGDDPRPVRTVFVGGGTPTLLAAGDLVRMLDVVRQEFGLADDAEITTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLAALREGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 202 GTPGESDDDWRASLEAAVGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +   +  A G   YE+SN +       LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IADEVLGAAGFDWYEVSNWATSPEGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E L+ E +  E +++ LRLREG+ +      AG     
Sbjct: 318 NVKHPGAYAAALAQGRSPGAGREILADEDRRVERILLELRLREGVPLSLLRE-AGL---A 373

Query: 357 ECERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
              R+L   G +E    +  R   T RG  + D V+ +L 
Sbjct: 374 AAARSL-ADGLLEPAPYEAGRAVLTLRGRLLADGVVRDLV 412


>gi|62181614|ref|YP_218031.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62129247|gb|AAX66950.1| putative oxidase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322716097|gb|EFZ07668.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 391

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 19  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVVWAQGREVKTIFIG 78

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 79  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 138

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 139 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 198

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 199 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 254

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 255 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPGGRILRTTKTRHPRGYMQ-----GRYL 309

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             +  +S + +  EF M   RL E     ++    G    +  +       QG++   + 
Sbjct: 310 ESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE- 368

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+ ++  L +
Sbjct: 369 QYWQITRHGKLFLNYLL-ELFL 389


>gi|291484998|dbj|BAI86073.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 379

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR+I F  +S DL++ LP QT+   E  +  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERARDIGFENISLDLMFGLPGQTLKHLEHSINTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEMVMSQMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T +G  + + V     
Sbjct: 357 AVYLTHQGKLLGNEVFGAFL 376


>gi|229081579|ref|ZP_04214076.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-2]
 gi|229180594|ref|ZP_04307936.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 172560W]
 gi|229192528|ref|ZP_04319490.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 10876]
 gi|228590952|gb|EEK48809.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 10876]
 gi|228603018|gb|EEK60497.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 172560W]
 gi|228701735|gb|EEL54224.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-2]
          Length = 379

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     SI +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSIKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|239817290|ref|YP_002946200.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
 gi|239803867|gb|ACS20934.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
          Length = 419

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 134/386 (34%), Positives = 213/386 (55%), Gaps = 15/386 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR-------YKVGQENFIQSFLTEMQWMRQLTGPRS 70
            L +Y+H P+C++KCPYCDFNSH  R         + +  ++ + + ++     L   R+
Sbjct: 37  PLSLYIHLPWCLRKCPYCDFNSHEWRATNEAEAEGIPESAYLDALIADLDAALPLIWGRT 96

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +IF GGGTPSL  PQ I  +L  +     ++   EIT+EANP + E N F+ YR AGV
Sbjct: 97  VHTIFIGGGTPSLFSPQAIDRLLGDVRARLKLAPECEITLEANPGTFERNRFRAYRSAGV 156

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            R+S+GVQS  ++ L+ LGR H+ ++AIAA+  A + F   + DL+YALP QT+   + +
Sbjct: 157 TRLSVGVQSFNDEHLKALGRVHDRAQAIAAVEEAASAFDTFNLDLMYALPGQTLEGLDAD 216

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+ A  H+S+Y LTIE  T F K        LP +++A  + +     T+A G+  
Sbjct: 217 LTQALALAPPHISVYHLTIEPNTRFAKFPP----ALPEDDLAYAMLDRITERTAASGMSR 272

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+S ++  G    HNLNYW++GDY+GIG GAHS++      V     + P  ++   R 
Sbjct: 273 YEVSAYARSGHACAHNLNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRFREPRLYMNNARA 332

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFI 368
            G AV + + ++      EF++  LRL+EG ++  +    G  +    +     +R+G I
Sbjct: 333 -GAAVAQSDEVALADLPFEFMLNALRLKEGFTLPQFSERTGLAMTSIQKGLEEAERKGLI 391

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
            R    R+  T+RG+  L  + +   
Sbjct: 392 AR-DLHRVWPTERGLDFLSDLQSLFL 416


>gi|254392599|ref|ZP_05007776.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197706263|gb|EDY52075.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 416

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     L  Y+H P+C  +C YCDFN++      G       ++N+  +   E++  
Sbjct: 27  ALDGAADRPLAFYLHVPYCATRCGYCDFNTYTASELRGSGGVLASRDNYAATVAEEVRHA 86

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R + G  PR + ++F GGGTP+L+  +++  +++ + K + ++ + EIT EANP SV   
Sbjct: 87  RTVLGDDPRPVRTVFVGGGTPTLLPARDLVAMVETVRKEFGLAEDAEITTEANPESVGPE 146

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R  G NRIS G+QS     L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 147 YLEELRAGGFNRISFGMQSARRHVLKVLDRTHTPGRPEACVAEARAAGFGHVNLDLIYGT 206

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 207 PGESDEDWRASLTAAVGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 266

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           +S+ +  G   YE+SN +       LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 267 ESVLAEAGYSWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 322

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   + +       +E LS E +  E +++ LRL +G+ +        R   +E 
Sbjct: 323 KHPGAYAAALAEGRSPGAGRELLSDEDRRVERVLLELRLVDGVPLSLL-----RPAGLEA 377

Query: 359 ERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
            R     G +E       R   T RG  + D+V+ +L 
Sbjct: 378 ARRALADGLLEASAYDGGRAVLTLRGRLLADAVVRDLV 415


>gi|323978750|gb|EGB73831.1| radical SAM superfamily protein [Escherichia coli TW10509]
          Length = 378

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVETADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|255767587|ref|NP_390428.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|251757469|sp|P54304|HEMN_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 1;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|225185215|emb|CAB14492.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 379

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T +G  + + V     
Sbjct: 357 AVYLTHQGKLLGNEVFGAFL 376


>gi|321312034|ref|YP_004204321.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
 gi|320018308|gb|ADV93294.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
          Length = 379

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEMVMSQMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T +G  + + V     
Sbjct: 357 AVYLTHQGKLLGNEVFGAFL 376


>gi|114326692|ref|YP_743849.1| coproporphyrinogen III oxidase [Granulibacter bethesdensis CGDNIH1]
 gi|114314866|gb|ABI60926.1| oxygen-independent coproporphyrinogen-III oxidase [Granulibacter
           bethesdensis CGDNIH1]
          Length = 394

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 166/384 (43%), Positives = 244/384 (63%), Gaps = 6/384 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+HWPFC+ KCPYCDFNSHV R ++ Q  F  +   E+ W     G R ++S+F
Sbjct: 13  TEPLALYIHWPFCLSKCPYCDFNSHV-RDEIPQARFAAALRAELAWEASRLGRRPLASVF 71

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +A +++   + +    ++EIT+EANP+SVE   F+ +R+AGVNR+SL
Sbjct: 72  FGGGTPSLMAPETVAALIEEATRYFPPCDDLEITLEANPTSVEAGRFRAFRQAGVNRVSL 131

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL +++L+ LGR H+A +A+AA+ LA  IFPR+SFDLIYA P QT+  W  EL++AL
Sbjct: 132 GIQSLHDEALKGLGRQHDAGQAMAALELAHTIFPRLSFDLIYARPGQTVAAWRQELRQAL 191

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A DHLSLYQLTIE GT +    + G+++LPS+  A +LY +T    +  G+ AYE+SN
Sbjct: 192 SLAGDHLSLYQLTIEPGTAYEASFRRGEIILPSDEQAAELYEVTGEEAAQFGMTAYEVSN 251

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  GAES HNL YWRY DY GIGPGAH RV       A    + PE W ++V + GH  
Sbjct: 252 YARSGAESRHNLAYWRYADYAGIGPGAHGRVSHSGSLFATRRHRAPEPWAELVERQGHGS 311

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL----QRQGFIERV 371
             +E +  +++A E L+MGLR+ +GI    +    G  L+   ++ +        ++ R 
Sbjct: 312 TLEEEVEPQERAREMLLMGLRITDGIDEARFRQRTGLTLEQAVDQEILSLALDNAYLSR- 370

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   LR    G   L++++  L +
Sbjct: 371 EHGNLRALPEGRVRLNALLQALVL 394


>gi|15833085|ref|NP_311858.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168747553|ref|ZP_02772575.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4113]
 gi|168753907|ref|ZP_02778914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168760097|ref|ZP_02785104.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168766962|ref|ZP_02791969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168773406|ref|ZP_02798413.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4196]
 gi|168781814|ref|ZP_02806821.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4076]
 gi|168785813|ref|ZP_02810820.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC869]
 gi|168797530|ref|ZP_02822537.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC508]
 gi|195937093|ref|ZP_03082475.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808361|ref|ZP_03250698.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814432|ref|ZP_03255761.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820028|ref|ZP_03260348.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209398861|ref|YP_002272435.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217327366|ref|ZP_03443449.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254794907|ref|YP_003079744.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261226267|ref|ZP_05940548.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256475|ref|ZP_05949008.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK966]
 gi|291284276|ref|YP_003501094.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O55:H7 str. CB9615]
 gi|13363303|dbj|BAB37254.1| putative oxidase [Escherichia coli O157:H7 str. Sakai]
 gi|187770940|gb|EDU34784.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188017808|gb|EDU55930.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189000657|gb|EDU69643.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189358465|gb|EDU76884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363639|gb|EDU82058.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369451|gb|EDU87867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4501]
 gi|189374207|gb|EDU92623.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC869]
 gi|189379632|gb|EDU98048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC508]
 gi|208728162|gb|EDZ77763.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735709|gb|EDZ84396.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740151|gb|EDZ87833.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209160261|gb|ACI37694.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EC4115]
 gi|209760008|gb|ACI78316.1| putative oxidase [Escherichia coli]
 gi|209760010|gb|ACI78317.1| putative oxidase [Escherichia coli]
 gi|209760012|gb|ACI78318.1| putative oxidase [Escherichia coli]
 gi|209760014|gb|ACI78319.1| putative oxidase [Escherichia coli]
 gi|209760016|gb|ACI78320.1| putative oxidase [Escherichia coli]
 gi|217319733|gb|EEC28158.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254594307|gb|ACT73668.1| predicted oxidoreductase [Escherichia coli O157:H7 str. TW14359]
 gi|290764149|gb|ADD58110.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli O55:H7 str. CB9615]
 gi|320189304|gb|EFW63963.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640601|gb|EFX10140.1| HemN family oxidoreductase [Escherichia coli O157:H7 str. G5101]
 gi|320645848|gb|EFX14833.1| HemN family oxidoreductase [Escherichia coli O157:H- str. 493-89]
 gi|320651148|gb|EFX19588.1| HemN family oxidoreductase [Escherichia coli O157:H- str. H 2687]
 gi|320656644|gb|EFX24540.1| HemN family oxidoreductase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662163|gb|EFX29564.1| HemN family oxidoreductase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667238|gb|EFX34201.1| HemN family oxidoreductase [Escherichia coli O157:H7 str. LSU-61]
 gi|326338957|gb|EGD62772.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044]
 gi|326343161|gb|EGD66929.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125]
          Length = 378

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGSAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|82545422|ref|YP_409369.1| coproporphyrinogen III oxidase [Shigella boydii Sb227]
 gi|187733274|ref|YP_001881728.1| coproporphyrinogen III oxidase [Shigella boydii CDC 3083-94]
 gi|191167957|ref|ZP_03029760.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B7A]
 gi|309794044|ref|ZP_07688469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 145-7]
 gi|81246833|gb|ABB67541.1| putative oxidase [Shigella boydii Sb227]
 gi|187430266|gb|ACD09540.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shigella boydii CDC 3083-94]
 gi|190902042|gb|EDV61788.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B7A]
 gi|308122451|gb|EFO59713.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 145-7]
 gi|320174049|gb|EFW49219.1| coproporphyrinogen III oxidase [Shigella dysenteriae CDC 74-1112]
 gi|320184302|gb|EFW59114.1| coproporphyrinogen III oxidase [Shigella flexneri CDC 796-83]
 gi|332091339|gb|EGI96427.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella boydii 3594-74]
          Length = 378

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|325981769|ref|YP_004294171.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosomonas sp.
           AL212]
 gi|325531288|gb|ADZ26009.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosomonas sp.
           AL212]
          Length = 404

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 127/378 (33%), Positives = 205/378 (54%), Gaps = 10/378 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +YVH+P+C+KKCPYCDFNSH       +V +E ++ + + +++   Q    R ++S+
Sbjct: 14  PLSLYVHFPWCLKKCPYCDFNSHELRTDESRVPEEEYVATLIRDLESALQDVWGRRLNSV 73

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL     +  +L  +     +    E+T+EANP + E   F  +RKAG+NR+S
Sbjct: 74  FLGGGTPSLFSAGAMDAVLTAVRTLLPLEHFAEVTLEANPGTFEAQKFADFRKAGINRLS 133

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS   Q L+ LGR H+  EA  A+ +A   F  ++ DL+YALP QT+   + +++ A
Sbjct: 134 IGIQSFNPQHLKALGRVHDDQEAHRAVDIALKYFDNINLDLMYALPGQTLEHAQADIEAA 193

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  V H+S Y LT+E  TLFY+        LP +  A  + ++ +  TS H    YE S
Sbjct: 194 CACGVTHISAYHLTLEPNTLFYRFPP----KLPDDEAAAAMQDMIEQTTSDHQYRNYETS 249

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
             +  G ES HN+NYW +GDY+GIG GAHS++      V     K P+ +L   R  G  
Sbjct: 250 AFARAGKESRHNVNYWLFGDYVGIGAGAHSKISFADKIVRQMRYKQPKEYLAKARMGGSL 309

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
           +  ++ L+   ++ EF+M  LRL  G     ++   G  + +  +     +++G +    
Sbjct: 310 IQVQQELTVADRSFEFMMNALRLTGGFDTPLFQERTGLPIAVVQQQLDEAEQRGLLVHDH 369

Query: 373 FSRLRCTQRGMTMLDSVI 390
             R++ T  G   L+ ++
Sbjct: 370 L-RIKPTVLGRRFLNDLL 386


>gi|331684582|ref|ZP_08385174.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
 gi|331078197|gb|EGI49403.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
          Length = 378

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|261342372|ref|ZP_05970230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315007|gb|EFC53945.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterobacter cancerogenus ATCC 35316]
          Length = 380

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 207/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++   L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVAHLLADLDADVPYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  EQ L  LGR H   EA  A HLA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEQKLTRLGRIHGPDEAKRAAHLATGLGLRSFNLDLMHGLPDQSLDEALDDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
             +  + +  +  EF M   RL E     ++    G     +  + +  L  QG++    
Sbjct: 297 ERQHDVEAADKPFEFFMNRFRLLEAAPRTEFSRYTGLAESVIRPQIDEAL-AQGYLTECD 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T+ G   L+S++  L +
Sbjct: 356 -EYWQITEHGKLFLNSLL-ELFL 376


>gi|187478425|ref|YP_786449.1| coproporphyrinogen III oxidase [Bordetella avium 197N]
 gi|115423011|emb|CAJ49541.1| putative oxygen-independent coprophorphyrinogen III oxidasee
           [Bordetella avium 197N]
          Length = 405

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 125/376 (33%), Positives = 211/376 (56%), Gaps = 9/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L VYVH P+CV+KCPYCDFNSH      + +  ++ +   +++    L   R + S+F 
Sbjct: 30  PLSVYVHVPWCVRKCPYCDFNSHAMPGQDIPERAYLDALRADLEQAVPLVWGRQVISVFI 89

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  +     +  + EIT+EANP + E + F  Y  +GV R SLG
Sbjct: 90  GGGTPSLLSAAGLDELLAMLRACLNLLPDAEITMEANPGTAEASRFLDYAASGVTRFSLG 149

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS ++  L  LGR H++++A AAI +A+    R++ D+++ALP Q +     +L+ ALS
Sbjct: 150 IQSFDDAQLHKLGRIHDSAQARAAIEMAQRAVSRVNLDVMFALPGQDINACVADLREALS 209

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +HLSLY LT+E  T+F K        LP ++ +  + +  ++  +  GL  YE+S +
Sbjct: 210 FGTEHLSLYHLTLEPNTVFAKYPP----ELPDDDDSAAMQDAVEATLADAGLARYEVSAY 265

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAV 315
           +  GA   HN+NYW +GDY+G+GPGAH ++      V  +  ++PESW++  + ++G  V
Sbjct: 266 ARQGARCKHNVNYWEFGDYLGLGPGAHGKLSFHDRIVREARHRNPESWMQRAMARDGSHV 325

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            E   +  ++   EF++  LRL++G++   +    G +L           ++G ++    
Sbjct: 326 AENRQVGPDELPFEFMLNALRLKDGVAASSFSERTGLSLAAIAHQLDAASQRGLLD-ADP 384

Query: 374 SRLRCTQRGMTMLDSV 389
           +RLR T  G   L+ +
Sbjct: 385 TRLRATALGWRFLNDL 400


>gi|262042607|ref|ZP_06015763.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040041|gb|EEW41156.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 378

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAHYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G               QG+++  + 
Sbjct: 297 ERQHDVEEADKPFEFFMNRFRLLEAAPRAEFSRYTGLEEAAIRPQLDAAIAQGYLQEDEQ 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + T+ G   L+S++  L +
Sbjct: 357 N-WQITEHGKLFLNSLL-ELFL 376


>gi|306812141|ref|ZP_07446339.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|305854179|gb|EFM54617.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
          Length = 378

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIK 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|326779437|ref|ZP_08238702.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces cf.
           griseus XylebKG-1]
 gi|326659770|gb|EGE44616.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces cf.
           griseus XylebKG-1]
          Length = 413

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 194/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  
Sbjct: 24  ALEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLIEEVRQA 83

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV+  
Sbjct: 84  RKVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLADDAEITTEANPESVDPA 143

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NR+S G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 144 YLTALREGGFNRVSFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGT 203

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y + 
Sbjct: 204 PGESDDDWRATLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEIPMTDDDAHADRYLIA 263

Query: 240 QSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 264 DEAFAAAGFHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 319

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + + +       +E L+ E +  E +++ LRLREG  +        +   +  
Sbjct: 320 KHPGAYAQALAEGRSPGAGREILAEEDRRVERILLELRLREGCPLDLL-----KPDGLAA 374

Query: 359 ERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLA 394
            R     G +  E     R   T RG  + D+V+ +L 
Sbjct: 375 SRRALADGLLAPEPYDRGRAVLTLRGRLLADAVVRDLV 412


>gi|239979389|ref|ZP_04701913.1| coproporphyrinogen III oxidase [Streptomyces albus J1074]
 gi|291451264|ref|ZP_06590654.1| coproporphyrinogen III oxidase [Streptomyces albus J1074]
 gi|291354213|gb|EFE81115.1| coproporphyrinogen III oxidase [Streptomyces albus J1074]
          Length = 413

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 117/400 (29%), Positives = 191/400 (47%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-------VGQENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++              ++N+  +   E++
Sbjct: 22  ASALDGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRSSGGVLASRDNYADTLADEVR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+  +++  +LD +   + ++ + EIT EANP SV+
Sbjct: 82  LARKVLGDDPREVRTVFVGGGTPTLLAARDLVRMLDAVRSEFGLAPDAEITTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R+ G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLAELREGGFNRISFGMQSARQHVLKVLDRRHTPGRPEACVAEARAAGFDHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  A+    DH+S Y L +E+GT   +  + G++    ++   D Y 
Sbjct: 202 GTPGESDDDWRASLSAAVGAGPDHVSAYALIVEEGTGLARRIRRGEVAPTDDDEHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +  ++ +  G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IADTMLAEAGYHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +  +      +E L+ E +  E +++ LRL +G  +            +
Sbjct: 318 NVKHPGAYAAALADSRSPGAGRELLTPEDRRVERILLELRLADGCPLALLN-----PAGL 372

Query: 357 ECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              R     G +    F   R   T RG  + D+V+ +L 
Sbjct: 373 AAARQALTDGLLAETPFAEGRAVLTLRGRLLADAVVRDLV 412


>gi|218691079|ref|YP_002399291.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|331659090|ref|ZP_08360032.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
 gi|218428643|emb|CAR09427.1| putative oxidoreductase [Escherichia coli ED1a]
 gi|315295644|gb|EFU54967.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 16-3]
 gi|331053672|gb|EGI25701.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
          Length = 378

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLEEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|227518567|ref|ZP_03948616.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX0104]
 gi|227553094|ref|ZP_03983143.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis HH22]
 gi|255976024|ref|ZP_05426610.1| coproporphyrinogen III oxidase [Enterococcus faecalis T2]
 gi|256958791|ref|ZP_05562962.1| coproporphyrinogen III oxidase [Enterococcus faecalis DS5]
 gi|257078822|ref|ZP_05573183.1| coproporphyrinogen III oxidase [Enterococcus faecalis JH1]
 gi|257419124|ref|ZP_05596118.1| coproporphyrinogen III oxidase [Enterococcus faecalis T11]
 gi|307271214|ref|ZP_07552497.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4248]
 gi|307279122|ref|ZP_07560180.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0860]
 gi|307291287|ref|ZP_07571171.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0411]
 gi|312899410|ref|ZP_07758741.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0470]
 gi|227073986|gb|EEI11949.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis TX0104]
 gi|227177780|gb|EEI58752.1| coproporphyrinogen dehydrogenase [Enterococcus faecalis HH22]
 gi|255968896|gb|EET99518.1| coproporphyrinogen III oxidase [Enterococcus faecalis T2]
 gi|256949287|gb|EEU65919.1| coproporphyrinogen III oxidase [Enterococcus faecalis DS5]
 gi|256986852|gb|EEU74154.1| coproporphyrinogen III oxidase [Enterococcus faecalis JH1]
 gi|257160952|gb|EEU90912.1| coproporphyrinogen III oxidase [Enterococcus faecalis T11]
 gi|306497518|gb|EFM67051.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0411]
 gi|306504247|gb|EFM73459.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0860]
 gi|306512712|gb|EFM81361.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4248]
 gi|311293454|gb|EFQ72010.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0470]
 gi|315030964|gb|EFT42896.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX4000]
 gi|315033700|gb|EFT45632.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0017]
 gi|315036785|gb|EFT48717.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0027]
 gi|315575638|gb|EFU87829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0309B]
 gi|315579919|gb|EFU92110.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0309A]
          Length = 382

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|152984897|ref|YP_001345880.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PA7]
 gi|150960055|gb|ABR82080.1| probable oxidase [Pseudomonas aeruginosa PA7]
          Length = 384

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 208/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQAKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+  EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGDEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++   HG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDEHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--LDIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+      +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAALADACAAARDAGLLAE-DP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RLR ++RG   L+ ++ +  
Sbjct: 363 QRLRPSERGQLFLNDLLQHFL 383


>gi|221065459|ref|ZP_03541564.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
 gi|220710482|gb|EED65850.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
          Length = 409

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 127/376 (33%), Positives = 215/376 (57%), Gaps = 10/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+KKCPYCDFNSH   +   + ++ +I + + +++    L   R++ S+F
Sbjct: 35  PLSLYVHLPWCLKKCPYCDFNSHAWAKGDALPEDRYIDALMADLESALPLIWGRTVHSVF 94

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++I  ++ G+     +  + EIT+EANP + E + F+ +R AGVNR+S+
Sbjct: 95  MGGGTPSLFSPESIDKLIAGLRARLRMEPDCEITMEANPGTFEKDRFKAFRAAGVNRLSI 154

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ L+ +GR H+A++A AA+  A + F   + DL+YALP Q++   + ++  AL
Sbjct: 155 GVQSFDDRYLQAVGRVHDAAQAQAAVREAADNFETFNIDLMYALPGQSLADLQRDVDTAL 214

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++A  HLS+Y LTIE  T F K       ++P ++ A ++ +L  + T   G+  YE+S 
Sbjct: 215 AFAPPHLSIYHLTIEPNTYFAKYPP----LVPEDDTAYEMLDLITASTQGAGMQRYEVSA 270

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G +  HN NYW++GDY+GIG GAHS++      V     + P  ++ M    G  +
Sbjct: 271 YAKEGHQCFHNSNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRFRDPARYMDMALA-GTPL 329

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            +   +   +   E+++  LRLR G +++++    G  +          Q +G I R   
Sbjct: 330 AQDNEVKRAELPFEYMLNALRLRGGFALQEFMERTGLPMSAIAKGLDQAQAKGLITR-DL 388

Query: 374 SRLRCTQRGMTMLDSV 389
            R+  T+RG   L  +
Sbjct: 389 GRVVPTERGFDFLSDL 404


>gi|158320265|ref|YP_001512772.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus oremlandii OhILAs]
 gi|158140464|gb|ABW18776.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus oremlandii OhILAs]
          Length = 379

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 216/383 (56%), Gaps = 10/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NS+ +Y+H PFC KKC YCDFNS+  +  +  + +I++   EMQ   ++    S++++FF
Sbjct: 2   NSIALYIHIPFCEKKCHYCDFNSYSGKNHL-VDGYIKALKKEMQQYGEIIKGHSVATVFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + +A I++ + + +T+    EI++EANP ++  +  + Y K+G+NR+S+G
Sbjct: 61  GGGTPSILTGEQMAEIMETLRRYYTLEEQAEISMEANPGTLNFHKLKAYYKSGINRLSMG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ LGR H+  E +  +  AR   F  ++ DL+++LP QT   W+  L++ +
Sbjct: 121 LQSCQNHLLKTLGRIHSFEEYVKNLEDARKAGFTNINTDLMFSLPGQTERDWQESLEKIV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  + H+S Y L +E+GT F+   ++  ++LP E V +++Y+ T     + G H YEISN
Sbjct: 181 SLGIPHISAYSLIVEEGTPFFSWVENKKIILPDEEVDMNMYHYTIEYLKSRGYHHYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN+ YW    YIG+G GAHS            I+K    ++ ++ +    V
Sbjct: 241 YAKNGFECKHNITYWHNEHYIGLGAGAHSYFDQKRFNNFADIDK----YIHLLGEGSSPV 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            E+  +S   +  E + +GLR+ EGIS+  +          +  +    L++QG I+  +
Sbjct: 297 EEEILVSKNDEIAETMFLGLRMMEGISIDGFFKRFHTTPLAIYEDTLEKLRKQGLIQWDE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +  T +G+ + + V   + +
Sbjct: 357 KG-IWLTSKGIDLSNVVFEKMLL 378


>gi|254162865|ref|YP_003045973.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|297520257|ref|ZP_06938643.1| coproporphyrinogen III oxidase [Escherichia coli OP50]
 gi|242378481|emb|CAQ33265.1| predicted oxidoreductase [Escherichia coli BL21(DE3)]
 gi|253974766|gb|ACT40437.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|253978932|gb|ACT44602.1| coproporphyrinogen III oxidase [Escherichia coli BL21(DE3)]
 gi|323971758|gb|EGB66985.1| radical SAM superfamily protein [Escherichia coli TA007]
 gi|324005511|gb|EGB74730.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 57-2]
          Length = 378

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|331674434|ref|ZP_08375194.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
 gi|331068528|gb|EGI39923.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
          Length = 378

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 MNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEATDKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|228941484|ref|ZP_04104034.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228974414|ref|ZP_04134982.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228981009|ref|ZP_04141311.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis Bt407]
 gi|228778669|gb|EEM26934.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis Bt407]
 gi|228785250|gb|EEM33261.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228818134|gb|EEM64209.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326942100|gb|AEA17996.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 379

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-ENG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|218706470|ref|YP_002413989.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293406462|ref|ZP_06650388.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298382199|ref|ZP_06991796.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300900228|ref|ZP_07118412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 198-1]
 gi|218433567|emb|CAR14470.1| putative oxidoreductase [Escherichia coli UMN026]
 gi|291426468|gb|EFE99500.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298277339|gb|EFI18855.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300356244|gb|EFJ72114.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 198-1]
          Length = 378

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP+Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPEQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|255972986|ref|ZP_05423572.1| coproporphyrinogen III oxidase [Enterococcus faecalis T1]
 gi|256762300|ref|ZP_05502880.1| coproporphyrinogen III oxidase [Enterococcus faecalis T3]
 gi|256965300|ref|ZP_05569471.1| coproporphyrinogen III oxidase [Enterococcus faecalis HIP11704]
 gi|257086650|ref|ZP_05581011.1| coproporphyrinogen III oxidase [Enterococcus faecalis D6]
 gi|257415922|ref|ZP_05592916.1| coproporphyrinogen III oxidase [Enterococcus faecalis AR01/DG]
 gi|257422809|ref|ZP_05599799.1| coproporphyrinogen III oxidase [Enterococcus faecalis X98]
 gi|307273405|ref|ZP_07554650.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0855]
 gi|255964004|gb|EET96480.1| coproporphyrinogen III oxidase [Enterococcus faecalis T1]
 gi|256683551|gb|EEU23246.1| coproporphyrinogen III oxidase [Enterococcus faecalis T3]
 gi|256955796|gb|EEU72428.1| coproporphyrinogen III oxidase [Enterococcus faecalis HIP11704]
 gi|256994680|gb|EEU81982.1| coproporphyrinogen III oxidase [Enterococcus faecalis D6]
 gi|257157750|gb|EEU87710.1| coproporphyrinogen III oxidase [Enterococcus faecalis ARO1/DG]
 gi|257164633|gb|EEU94593.1| coproporphyrinogen III oxidase [Enterococcus faecalis X98]
 gi|306509932|gb|EFM78957.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0855]
 gi|315027456|gb|EFT39388.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2137]
 gi|315150712|gb|EFT94728.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0012]
 gi|315153265|gb|EFT97281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0031]
 gi|315155957|gb|EFT99973.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0043]
 gi|315157875|gb|EFU01892.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0312]
          Length = 382

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|327412906|emb|CAX67920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella bongori]
          Length = 378

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAGAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGRAMQTLLDGVRARLNLAVDAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA        + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKKLGRIHGPKEAKRAANLASGLALRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKSGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G   ++  ++      QG++   + 
Sbjct: 297 ESQREVEDADKPFEFFMNRFRLLEAAPRVEFSQYTGLGEEVIRQQMDEAIAQGYVTESED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + TQRG   L+S++  L +
Sbjct: 357 N-WQITQRGKLFLNSLL-ELFL 376


>gi|294812565|ref|ZP_06771208.1| Coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|326440982|ref|ZP_08215716.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294325164|gb|EFG06807.1| Coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 410

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     L  Y+H P+C  +C YCDFN++      G       ++N+  +   E++  
Sbjct: 21  ALDGAADRPLAFYLHVPYCATRCGYCDFNTYTASELRGSGGVLASRDNYAATVAEEVRHA 80

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R + G  PR + ++F GGGTP+L+  +++  +++ + K + ++ + EIT EANP SV   
Sbjct: 81  RTVLGDDPRPVRTVFVGGGTPTLLPARDLVAMVETVRKEFGLAEDAEITTEANPESVGPE 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R  G NRIS G+QS     L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 141 YLEELRAGGFNRISFGMQSARRHVLKVLDRTHTPGRPEACVAEARAAGFGHVNLDLIYGT 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 201 PGESDEDWRASLTAAVGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 260

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           +S+ +  G   YE+SN +       LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 261 ESVLAEAGYSWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 316

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   + +       +E LS E +  E +++ LRL +G+ +        R   +E 
Sbjct: 317 KHPGAYAAALAEGRSPGAGRELLSDEDRRVERVLLELRLVDGVPLSLL-----RPAGLEA 371

Query: 359 ERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
            R     G +E       R   T RG  + D+V+ +L 
Sbjct: 372 ARRALADGLLEASAYDGGRAVLTLRGRLLADAVVRDLV 409


>gi|315145614|gb|EFT89630.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX2141]
 gi|315160301|gb|EFU04318.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0645]
 gi|315166723|gb|EFU10740.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1341]
          Length = 382

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E++  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIRLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|215488253|ref|YP_002330684.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215266325|emb|CAS10756.1| predicted oxidoreductase [Escherichia coli O127:H6 str. E2348/69]
          Length = 378

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEAFGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|228954603|ref|ZP_04116627.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228805049|gb|EEM51644.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 379

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     SI +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKIPFDSIKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNIEMDQVFAKQLQSNQEQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|222034650|emb|CAP77392.1| Oxygen-independent coproporphyrinogen III oxidase-like [Escherichia
           coli LF82]
 gi|312947486|gb|ADR28313.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 378

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLTADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G +  +          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEAVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|323188651|gb|EFZ73936.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli RN587/1]
          Length = 378

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA ++  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASSLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|218889127|ref|YP_002437991.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa LESB58]
 gi|218769350|emb|CAW25110.1| probable oxidase [Pseudomonas aeruginosa LESB58]
          Length = 384

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 210/381 (55%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++   HG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDEHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RLR ++RG   L+ ++ +  
Sbjct: 363 QRLRPSERGQLFLNDLLQHFL 383


>gi|254237379|ref|ZP_04930702.1| hypothetical protein PACG_03453 [Pseudomonas aeruginosa C3719]
 gi|126169310|gb|EAZ54821.1| hypothetical protein PACG_03453 [Pseudomonas aeruginosa C3719]
          Length = 384

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 127/381 (33%), Positives = 211/381 (55%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGTELPEEAYVDALLADLEQDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++  AHG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDAHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RLR ++RG   L+ ++ +  
Sbjct: 363 QRLRPSERGQLFLNDLLQHFL 383


>gi|194436912|ref|ZP_03069012.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 101-1]
 gi|256024536|ref|ZP_05438401.1| coproporphyrinogen III oxidase [Escherichia sp. 4_1_40B]
 gi|194424394|gb|EDX40381.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 101-1]
 gi|323960752|gb|EGB56373.1| radical SAM superfamily protein [Escherichia coli H489]
          Length = 378

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L+G+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLNGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|163797075|ref|ZP_02191030.1| putative oxygen-independent coproporphyrinogen III oxidase [alpha
           proteobacterium BAL199]
 gi|159177591|gb|EDP62144.1| putative oxygen-independent coproporphyrinogen III oxidase [alpha
           proteobacterium BAL199]
          Length = 400

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 174/388 (44%), Positives = 238/388 (61%), Gaps = 6/388 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +T      +GVYVHWPFC  KCPYCDFNSHV    V  + +  + + E++      G R 
Sbjct: 8   LTTTLDEPMGVYVHWPFCRSKCPYCDFNSHVS-DTVDHDRWRTALVRELETQAARVGRRR 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+FFGGGTPSL+EP+ +A +LD +  ++ +++++E+T+EANP+SVE     G+R AGV
Sbjct: 67  VESVFFGGGTPSLMEPETVAAVLDTVRSSFRIANDLEVTLEANPTSVEAGRLDGFRDAGV 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L+++ LRFLGR H ASEA+AA+  AR  F R+SFDLIYA P Q+   W+ E
Sbjct: 127 NRVSLGVQALDDEVLRFLGRTHAASEALAAVAAARERFDRVSFDLIYARPGQSPQSWKRE 186

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  AL +A  HLSLYQLTIE  T F+ +H  G   LP E+ A  L+++TQ    A GL A
Sbjct: 187 LSEALKHAAGHLSLYQLTIEPTTPFHSLHARGAFRLPDEDTAATLWDVTQETLDAAGLSA 246

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SNH+  G E  HN+ YW Y DY+G+GPGAH R+     + A    + P  WL  V +
Sbjct: 247 YEVSNHARPGDECRHNVVYWTYRDYLGVGPGAHGRLSEAGGKTATRTHRAPSIWLDRVER 306

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQG 366
           +GHA+V+ + L  ++   E  + GLRL  G+S + W  L  R      DI     L   G
Sbjct: 307 DGHALVDDQMLDPDEVLVEATLTGLRLASGLSRERWHALFDRPPEDLFDIRTIGLLTDGG 366

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
           F+E  +   LR T  G   LD+V   L 
Sbjct: 367 FLELDEVG-LRATATGRARLDAVTDRLL 393


>gi|300995464|ref|ZP_07181112.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 200-1]
 gi|300304826|gb|EFJ59346.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 200-1]
          Length = 378

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|284007797|emb|CBA73657.1| oxygen-independent coproporphyrinogen III oxidase [Arsenophonus
           nasoniae]
          Length = 370

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 136/381 (35%), Positives = 223/381 (58%), Gaps = 16/381 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +YVH P+CV+KCPYCDFNSH  + ++ Q+ ++   LT++Q        R ++SIF GG
Sbjct: 1   MSLYVHIPWCVQKCPYCDFNSHALKGELPQQEYVTHLLTDLQADLAQIKGRQVNSIFIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++ + +  +LDGI +   ++S+ EIT+EANP +VE + F  Y++AG+NRIS+GVQ
Sbjct: 61  GTPSLLDAKAMQSLLDGIRQRLLLASDAEITMEANPGTVEADRFSQYQQAGINRISIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           S     L  LGR H   EAI A  LA  +  R  + DL++ LP QT+ Q   +LQ+A+  
Sbjct: 121 SFAADKLTKLGRIHGPEEAIQAASLASALNLRSFNLDLMHGLPDQTLEQALSDLQQAIDL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  H+S YQLTIE  T F         +LP+++   D+++    + +  G   YEIS ++
Sbjct: 181 SPPHISWYQLTIEPNTHFGS----CPPILPNDDALWDIFSQGHQLLNKAGYQQYEISGYA 236

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  ++      G  + 
Sbjct: 237 KPGYQCQHNLNYWRFGDYLGIGCGAHGKISFADGRILRTMKTKHPRGYM-----TGQYLY 291

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQF 373
           +++ ++   +  EF M   RL EG++ +++    G     +  + ++ L+ QG+I   + 
Sbjct: 292 QQQGVNQSDRPFEFFMNRFRLLEGVARQEFIDYTGLAENVIRHQLDKALE-QGYITETK- 349

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           S  + T++G   L+S++    
Sbjct: 350 SHWQITEQGKLFLNSLLTLFL 370


>gi|107099371|ref|ZP_01363289.1| hypothetical protein PaerPA_01000383 [Pseudomonas aeruginosa PACS2]
          Length = 384

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 209/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEHDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L +AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLSQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++   HG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDEHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RLR ++RG   L+ ++ +  
Sbjct: 363 QRLRPSERGQLFLNDLLQHFL 383


>gi|304396762|ref|ZP_07378642.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
 gi|304355558|gb|EFM19925.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
          Length = 379

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 129/383 (33%), Positives = 215/383 (56%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L G R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEIDLPLIGDREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+    T+S + E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRARLTLSPDAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L+ LGR H   EA+ A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLQRLGRIHGPEEAVRAAELAESLSLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGDQLLQAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G+  
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKTRHPRGFMQ-----GNYR 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  ++   +  E+ M   RL E     ++    G +   +  + +  +     IE  +
Sbjct: 297 EKQYDVADSDKPFEYFMNRFRLLEAAPRDEFSRYTGLSEQVIRPQMDAAIAAGYVIETAE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             + + T++G   L+S++  L +
Sbjct: 357 --QWQITEKGKLFLNSLL-ELFL 376


>gi|257082735|ref|ZP_05577096.1| coproporphyrinogen III oxidase [Enterococcus faecalis E1Sol]
 gi|256990765|gb|EEU78067.1| coproporphyrinogen III oxidase [Enterococcus faecalis E1Sol]
          Length = 382

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGKTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|239931354|ref|ZP_04688307.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
 gi|291439726|ref|ZP_06579116.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
 gi|291342621|gb|EFE69577.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
          Length = 413

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++   E++
Sbjct: 22  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYAETLTDEIR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++++ E+T EANP SV+
Sbjct: 82  LARKVLGDDPREVRTVFVGGGTPTLLAADDLVRMLGAIREEFGLAADAEVTTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLATLRAGGFNRISFGMQSARQHVLKVLDRIHTPGRPEACVAEARAAGFEHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  AL    DH+S Y L +E+GT   +  + G++    ++V  D Y 
Sbjct: 202 GTPGESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPTTDDDVHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + +   SA G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IAEETLSAAGFAWYEVSNWATSQAARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E LS E +  E +++ LRL EG+ +        R   +
Sbjct: 318 NVKHPGAYAAALAQGRSPGAGRELLSEEDRRVERILLELRLEEGVPLSLL-----RPEGL 372

Query: 357 ECERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
              R     G +     +  R   T RG  + D+V+ +L 
Sbjct: 373 GAARRALADGLLRPGPYEEGRAALTLRGRLLADAVVRDLV 412


>gi|182438782|ref|YP_001826501.1| coproporphyrinogen III oxidase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467298|dbj|BAG21818.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 410

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 193/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  
Sbjct: 21  ALEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLIEEVRQA 80

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV+  
Sbjct: 81  RKVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLADDAEITTEANPESVDPA 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 141 YLTALREGGFNRVSFGMQSARQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGT 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y + 
Sbjct: 201 PGESDDDWRATLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEIPMTDDDAHADRYLIA 260

Query: 240 QSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 261 DEAFAAAGFHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 316

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + + +       +E L+ E +  E +++ LRLREG  +        +   +  
Sbjct: 317 KHPGAYAQALAEGRSPGAGREILAEEDRRVERILLELRLREGCPLDLL-----KPDGLAA 371

Query: 359 ERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLA 394
            R     G +  E     R   T RG  + D+V+ +L 
Sbjct: 372 SRRALADGLLAPEPYDRGRAVLTLRGRLLADAVVRDLV 409


>gi|256962102|ref|ZP_05566273.1| coproporphyrinogen III oxidase [Enterococcus faecalis Merz96]
 gi|293383126|ref|ZP_06629043.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis R712]
 gi|293387721|ref|ZP_06632266.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis S613]
 gi|312907286|ref|ZP_07766277.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 512]
 gi|312909904|ref|ZP_07768752.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 516]
 gi|256952598|gb|EEU69230.1| coproporphyrinogen III oxidase [Enterococcus faecalis Merz96]
 gi|291079465|gb|EFE16829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis R712]
 gi|291082910|gb|EFE19873.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis S613]
 gi|310626314|gb|EFQ09597.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 512]
 gi|311289862|gb|EFQ68418.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis DAPTO 516]
          Length = 382

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENHLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|309811036|ref|ZP_07704834.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dermacoccus sp. Ellin185]
 gi|308435000|gb|EFP58834.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dermacoccus sp. Ellin185]
          Length = 410

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 116/390 (29%), Positives = 187/390 (47%), Gaps = 22/390 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY----KVGQENFIQSFLTEMQWMRQLTGPRS---- 70
            G+YVH PFCV +C YCDFN++              +  + L E+    +  G       
Sbjct: 29  FGLYVHVPFCVTRCGYCDFNTYTLTELGEPGASVSTYADAALRELDLAARELGEAPSGVP 88

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++F GGGTP+++   ++  IL    + + ++   E+T EANP SV+    +     G
Sbjct: 89  VIETVFIGGGTPTMLPADDLVRILAKARELFGLAEGCEVTTEANPDSVDETYLRTLADGG 148

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S+G+QS     L  L R HN +    A+  A+++  ++S DLIY  P +++  W  
Sbjct: 149 FTRVSIGMQSAVPHVLATLERTHNPANVERAVRAAKDVGLQVSIDLIYGAPGESLDDWRT 208

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  A++   DH+S Y L +E+GT      + G+L LP ++   D Y L  ++ +  G  
Sbjct: 209 SLDAAIALEPDHISAYALVVEEGTKMGAQVRRGELPLPDDDDEADKYELADALLADAGYD 268

Query: 250 AYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            YE+SN +     +  HNL YWR   + G+GPGAHS V      V     KHP ++ + V
Sbjct: 269 WYEVSNWARSPQTQCRHNLAYWRDEPWWGVGPGAHSHVGG----VRWWNVKHPRAYAQRV 324

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
                  +  E L   Q+ +E +++ +RL EG+ +   +    R         L   G I
Sbjct: 325 NAGLSPALAGELLEERQRYEERVLLQVRLAEGLPLDMLDDDGRR-----AVAGLVASGLI 379

Query: 369 E---RVQFSRLRCTQRGMTMLDSVIANLAV 395
           +    V+  R+R T RG  + D+V+  L  
Sbjct: 380 DGPSAVRDKRVRLTLRGRLLTDTVVRALLA 409


>gi|237654672|ref|YP_002890986.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T]
 gi|237625919|gb|ACR02609.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp.
           MZ1T]
          Length = 407

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 135/384 (35%), Positives = 204/384 (53%), Gaps = 9/384 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +    L +YVH+P+CVKKCPYCDFNSH  R   + ++ ++ + L ++Q        R + 
Sbjct: 28  EAPPPLSLYVHFPWCVKKCPYCDFNSHAPREGGIPEQAWLGAVLADLQHALPQVWGRRVH 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL+    +  +L GI     +    EIT+EANP +VE   F+ YR AGVNR
Sbjct: 88  SVFIGGGTPSLMSATTLDGLLTGIRMLLPLDPLAEITLEANPGTVEAGRFRDYRAAGVNR 147

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLG+QS ++  L  +GR H   EA  AI  AR  F R++ DL+YALP QT+     +L+
Sbjct: 148 LSLGIQSFDDAMLAKIGRIHGGEEARRAIEAARTHFERVNLDLMYALPGQTLDMALADLE 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+ + V HLS Y LT+E  T F          LP ++ A D+    ++  +A G   YE
Sbjct: 208 TAIGFGVQHLSCYHLTLEPNTPFA----HDPPPLPDDDTAADMQEAIEARLAAAGFTHYE 263

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            S  +    +S HNLNYW +GDY+G+GPGAH ++            KHP  +L+   ++ 
Sbjct: 264 TSAFARPHEQSRHNLNYWTFGDYLGLGPGAHGKLSSHEGIRREMRHKHPGRYLEGAARSD 323

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIER 370
             + E   +S  +   EF+M  LRL EG+  K +    G  ++         + +G ++ 
Sbjct: 324 F-IQEAREVSVAELPFEFMMNALRLTEGVPAKLFAARTGVPIEAITDELARARERGLLDT 382

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               +LR T +G   L+ ++    
Sbjct: 383 AD-GKLRPTLQGRRFLNELLQGFL 405


>gi|206578289|ref|YP_002236593.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Klebsiella pneumoniae 342]
 gi|206567347|gb|ACI09123.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Klebsiella pneumoniae 342]
          Length = 378

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AQPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G               QG+++  + 
Sbjct: 297 ERQHDVEEADKPFEFFMNRFRLLEAAPRAEFSRYTGLEEAAIRPQLDAAIAQGYLQEDEQ 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + T+ G   L+S++  L +
Sbjct: 357 N-WQITEHGKLFLNSLL-ELFL 376


>gi|254479248|ref|ZP_05092592.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034817|gb|EEB75547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydibrachium pacificum DSM 12653]
          Length = 375

 Score =  365 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 205/381 (53%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDFNS+V  Y+   E ++++ + E+++  +      I S++ 
Sbjct: 2   REIGIYIHIPFCKKKCYYCDFNSYVG-YEHLMEEYVKALIEEIKYYSE--EDLKIVSVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P  I ++L  I +++ V  + EITIE NP  +  +  + Y+  G+NRIS+G
Sbjct: 59  GGGTPNFLPPSYIEMVLSEIHRHYNVLGDAEITIEVNPGLLTEDKLKIYKVNGINRISIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L ++GR H   + +    L R  F  ++ DLIYALP QT  +W+  L + + 
Sbjct: 119 LQAFQNRLLEYIGRIHTVEDFLENYALIRKYFDNVNVDLIYALPTQTFEEWQETLIKVVE 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L +E+ T F +++++G L +  E   + +Y+       + G   YEISN 
Sbjct: 179 LKPEHISTYSLILEENTPFGRLYREGKLPVIDEEEELKMYHWGIEFLKSKGYCHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +  HN+ YW   +Y+G G GAHS  K         +    E ++  +   G A  
Sbjct: 239 ALPGYQCKHNILYWELKEYLGFGAGAHSYFKGRRWNNFERV----EEYIGAILGKGDARE 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQF 373
           +   LS E +  EF+ +GLR+R+G+  +++    G ++    E      ++ G IE+   
Sbjct: 295 KVIELSPEDEISEFMFLGLRMRKGVCEEEFRKRFGISMFERYEEIFIKYEKMGLIEK-DK 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             +R T++G+ + + +  +  
Sbjct: 354 DCVRLTEKGIDVSNVIFEDFL 374


>gi|315174393|gb|EFU18410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1346]
          Length = 382

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQLLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|281179964|dbj|BAI56294.1| putative oxidase [Escherichia coli SE15]
          Length = 378

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + +           QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEEFIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|295399233|ref|ZP_06809215.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978699|gb|EFG54295.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 383

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 127/380 (33%), Positives = 200/380 (52%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC + C YCDFN      +   + ++Q+   EM+   +      + ++F GGG
Sbjct: 7   SAYFHIPFCAQICYYCDFNKVFFHGQ-PVDEYLQAMEKEMKRTMEAFPADRLDTLFVGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++E + +   L  I K++  S+  VE T EANP+ +     Q  ++AGVNR+S GVQ
Sbjct: 66  TPTVLEMKQLDFFLQSIYKHFRFSAAEVEFTFEANPNELSKEKLQLLKEAGVNRLSFGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++  L+ +GR H   + I  I LA+ I F  +S DL+Y LP+QT+ Q+  +L+ A S 
Sbjct: 126 TFDDALLKAIGRTHRYEDVIKTIALAKEIGFENISIDLMYGLPRQTVAQFLTDLEIAFSL 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y L IE  T+FY + + G L+LPSE     +Y         H  H YEISN++
Sbjct: 186 DVQHISAYSLIIEPKTVFYNLMRKGKLLLPSEEEEAKMYEEAMRQMEMHDYHQYEISNYA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +S HNL YW   +Y GIG GAHS V          I+K    ++  V + G   +E
Sbjct: 246 RPGFQSRHNLTYWNNEEYYGIGAGAHSYVGGVRRANVRPIKK----YIAKVEETGFPYLE 301

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
              ++  +Q +E + +GLR  EG+S + +    G ++     + + R+   G +E  + +
Sbjct: 302 VHHVTKSEQMEEEMFLGLRKTEGVSKQRFFEKFGMSIPDVFGQAVAREKQKGLLEETE-T 360

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R TQRG  + + V     
Sbjct: 361 HIRLTQRGKLLGNEVFQAFI 380


>gi|28198630|ref|NP_778944.1| coproporphyrinogen III oxidase [Xylella fastidiosa Temecula1]
 gi|182681313|ref|YP_001829473.1| coproporphyrinogen III oxidase [Xylella fastidiosa M23]
 gi|28056714|gb|AAO28593.1| coproporphyrinogen III oxidase [Xylella fastidiosa Temecula1]
 gi|182631423|gb|ACB92199.1| oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa M23]
 gi|307579764|gb|ADN63733.1| coproporphyrinogen III oxidase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 383

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 136/380 (35%), Positives = 218/380 (57%), Gaps = 10/380 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F
Sbjct: 4   PPPLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I   L  +A    ++ + EIT+E NP + E   F  Y  AG+NR+S 
Sbjct: 64  LGGGTPSLFPPEAIDRFLQIVAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSF 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA
Sbjct: 124 GIQSFNDAALRRLGRIHDSLQAEQAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + A  HLS YQLT+E  T+FY         +P ++ A ++   TQ + +  G   YE+S
Sbjct: 184 FALAPTHLSYYQLTLEPNTVFYARPPQ---GIPDDDAAWEMQEHTQRLLAEAGYQHYEVS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNG 312
            ++  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L       
Sbjct: 241 AYAREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDN-AGTV 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
            A+   E + + +   E+++  LRLREG  ++D+ +  G  ++      R    +G++ R
Sbjct: 300 SAIGGDEIVPTARLPFEYMLNLLRLREGFRLQDFAVRTGLTVESIHAALREAVARGWL-R 358

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            +   +  T+ G+   + VI
Sbjct: 359 CELEHVIPTELGLRFANDVI 378


>gi|30022396|ref|NP_834027.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 14579]
 gi|218235720|ref|YP_002369126.1| coproporphyrinogen III oxidase [Bacillus cereus B4264]
 gi|228960585|ref|ZP_04122233.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229129597|ref|ZP_04258566.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-Cer4]
 gi|229152519|ref|ZP_04280710.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1550]
 gi|296504811|ref|YP_003666511.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
 gi|29897954|gb|AAP11228.1| Coproporphyrinogen oxidase, anaerobic [Bacillus cereus ATCC 14579]
 gi|218163677|gb|ACK63669.1| coproporphyrinogen dehydrogenase [Bacillus cereus B4264]
 gi|228630950|gb|EEK87588.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1550]
 gi|228653865|gb|EEL09734.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-Cer4]
 gi|228799098|gb|EEM46067.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|296325863|gb|ADH08791.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
          Length = 379

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|322516608|ref|ZP_08069522.1| coproporphyrinogen dehydrogenase [Streptococcus vestibularis ATCC
           49124]
 gi|322124878|gb|EFX96302.1| coproporphyrinogen dehydrogenase [Streptococcus vestibularis ATCC
           49124]
          Length = 378

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 209/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++ + + E +    L   + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLSALIREWE----LLNIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + + 
Sbjct: 294 RLHEEHLTKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|239941056|ref|ZP_04692993.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|239987535|ref|ZP_04708199.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           11379]
 gi|291444496|ref|ZP_06583886.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|291347443|gb|EFE74347.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
          Length = 413

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  
Sbjct: 24  ALEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAVHLIEEVRRA 83

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+  
Sbjct: 84  RKVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIRDEFGLADDAEITTEANPESVDPA 143

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R+ G NR+S G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 144 YLEALREGGFNRVSFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIYGT 203

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y + 
Sbjct: 204 PGESDDDWRATLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEIPMTDDDAHADRYLIA 263

Query: 240 QSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A G H YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 264 DEAFAAAGFHWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 319

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + + +     V +E L+ E +  E +++ LRLREG  +        +   +  
Sbjct: 320 KHPGAYAQALAEGRSPGVGREILAEEDRRVERILLELRLREGCPLDLL-----KPDGLAA 374

Query: 359 ERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLA 394
            R     G +  E     R   T RG  + D+V+ +L 
Sbjct: 375 SRRALTDGLLDPEPYDKGRAVLTLRGRLLADAVVRDLV 412


>gi|331654467|ref|ZP_08355467.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
 gi|331047849|gb|EGI19926.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
          Length = 378

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 133/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGSAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           + LG +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKLGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|293416216|ref|ZP_06658856.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291432405|gb|EFF05387.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 378

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQSREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSTYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|290511358|ref|ZP_06550727.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
 gi|289776351|gb|EFD84350.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
          Length = 378

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q   Q    R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAQYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AKPDFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G               QG+++  + 
Sbjct: 297 ERQHDVEEADKPFEFFMNRFRLLEAAPRAEFSRYTGLEEAAIRPQLDAAIAQGYLQEDEQ 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + T+ G   L+S++  L +
Sbjct: 357 N-WQITEHGKLFLNSLL-ELFL 376


>gi|227888510|ref|ZP_04006315.1| coproporphyrinogen oxidase [Escherichia coli 83972]
 gi|227834779|gb|EEJ45245.1| coproporphyrinogen oxidase [Escherichia coli 83972]
 gi|307554937|gb|ADN47712.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli ABU 83972]
          Length = 378

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G +  +          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEAVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|299529925|ref|ZP_07043353.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Comamonas testosteroni S44]
 gi|298722097|gb|EFI63026.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Comamonas testosteroni S44]
          Length = 409

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 131/376 (34%), Positives = 215/376 (57%), Gaps = 10/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+KKCPYCDFNSH   +   + ++ +I + + +++    L   R++ S+F
Sbjct: 35  PLSLYVHLPWCLKKCPYCDFNSHAWAKGDALPEDRYIDALMADLESALPLIWGRTVHSVF 94

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++I  ++ G+     +  + EIT+EANP + E + F+ +R AGVNR+S+
Sbjct: 95  MGGGTPSLFSPESIDKLIAGLRARLRMEPDCEITMEANPGTFEKDRFKAFRAAGVNRLSI 154

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ L+ +GR H+A++A AA+  A + F   + DL+YALP Q+M   + ++  AL
Sbjct: 155 GVQSFDDRYLQAVGRVHDAAQAQAAVREAADNFETFNIDLMYALPGQSMVDLQRDVDTAL 214

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+A  HLS+Y LTIE  T F K       V+P ++ A ++ +L  + T A G+  YE+S 
Sbjct: 215 SFAPPHLSIYHLTIEPNTYFAKYPP----VVPEDDTAYEMLDLITASTRAAGMQRYEVSA 270

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G +  HN NYW++GDY+GIG GAHS++      V     + P  ++ M    G  +
Sbjct: 271 YAKDGHQCFHNSNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRFRDPARYIDMALA-GTPL 329

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            +   +       E+++  LRLR G +++++    G  +          Q +G I R   
Sbjct: 330 AQDNEVKRADLPFEYMLNALRLRGGFALQEFMERTGLPMSAIAKGLDQAQAKGLISR-DL 388

Query: 374 SRLRCTQRGMTMLDSV 389
            R+  T+RG   L  +
Sbjct: 389 GRVVPTERGFDFLSDL 404


>gi|260775572|ref|ZP_05884469.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608753|gb|EEX34918.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 392

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 142/394 (36%), Positives = 214/394 (54%), Gaps = 14/394 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE----MQWMRQLT 66
           M+     +L +YVH P+CV+KCPYCDFNSH  +  + ++ +I + L +    ++  +   
Sbjct: 1   MSQLIPPALSLYVHIPWCVQKCPYCDFNSHALKADIPEQEYIAALLEDLDTDIERYQLKA 60

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            PR++ SIF GGGTPSLI  Q I+ +L GI K       +EIT+EANP ++E   F GYR
Sbjct: 61  NPRALHSIFIGGGTPSLISAQGISDLLAGIEKRIAFKDEIEITMEANPGTIEAERFAGYR 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMT 185
           KAGV RIS+GVQS E+Q L  LGR H   EA+ A  LA  I     + DL++ LP QT+ 
Sbjct: 121 KAGVTRISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHKIGLNSFNLDLMHGLPDQTVE 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q  M+L++A+     HLS YQLTIE  T+F+        VLP ++   D++ L     + 
Sbjct: 181 QALMDLEKAIELNPPHLSWYQLTIEPNTMFHYKPP----VLPDDDDLWDIFELGHQKLAE 236

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESW 304
            G   YEIS +S    +  HNLNYWR+GDY+GIG G+H ++     R+  + + KHP  +
Sbjct: 237 AGYVQYEISGYSKPEYQCQHNLNYWRFGDYLGIGCGSHGKLSFADGRIIRTTKVKHPRGY 296

Query: 305 LKMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERN 361
           L   +      ++ E  ++SE +  EF M   RL E    +D+    G + +   E    
Sbjct: 297 LAAYQNMVKPYLDSEADVASEDRPFEFFMNRFRLMEACPKQDFLDTTGLSFESIQETIDW 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +   ++     +  + T++G   L+ ++     
Sbjct: 357 AKEMQYLSESD-THWQITEKGKLFLNDLLEAFMA 389


>gi|152967355|ref|YP_001363139.1| coproporphyrinogen III oxidase [Kineococcus radiotolerans SRS30216]
 gi|151361872|gb|ABS04875.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Kineococcus radiotolerans SRS30216]
          Length = 401

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 121/392 (30%), Positives = 186/392 (47%), Gaps = 17/392 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQL 65
             + G    S GVY+H PFC  +C YCDFN++      G   Q  + Q+   E+    ++
Sbjct: 20  TALAGAAQRSFGVYLHVPFCAVRCGYCDFNTYTATELGGGGSQAAYAQTAAREVTLAAEV 79

Query: 66  TGP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            G   R   ++FFGGGTP+L+   ++A +L  + ++  ++   E+T EANP SV      
Sbjct: 80  LGDAARPAQTVFFGGGTPTLLPAADLASMLRAVREDLGIAPGAEVTTEANPDSVTPEGLA 139

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              +AG  R+S G+QS     L  L R H+ +   +A+  AR     +S DLIY  P ++
Sbjct: 140 QLAEAGFTRVSFGMQSAVPHVLAVLERTHDPARVPSAVRWAREAGLEVSLDLIYGTPGES 199

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L  AL+   DH+S Y L +E+GT      + G++  PS++   D Y +     
Sbjct: 200 HDDLRASLDAALACEPDHVSAYALIVEQGTKLAGQMRRGEVPEPSDDDEADKYEIVDDTL 259

Query: 244 SAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +A G   YE+SN +   G    HNL YWR GD+ GIGPGAHS V      V     KHP 
Sbjct: 260 TAAGFSWYEVSNWAREPGNACEHNLAYWRGGDWWGIGPGAHSHVGG----VRWWNVKHPT 315

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           ++   + +       +E L ++ +  E +++  RL EG     W +             L
Sbjct: 316 AYAGRLGRGESPAHAREVLGADDRRVEDVLLRSRLAEGFDPAWWGVR-------PQTAQL 368

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              G +E     R+  T+RG  + D+V+  L 
Sbjct: 369 LLDGLLEPAPQGRVALTRRGRLLADAVVRRLL 400


>gi|15595583|ref|NP_249077.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAO1]
 gi|9946239|gb|AAG03775.1|AE004476_5 probable oxidase [Pseudomonas aeruginosa PAO1]
          Length = 384

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 209/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++   HG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDEHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             LR ++RG   L+ ++ +  
Sbjct: 363 QHLRPSERGQLFLNDLLQHFL 383


>gi|332289357|ref|YP_004420209.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
 gi|330432253|gb|AEC17312.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
          Length = 378

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 138/382 (36%), Positives = 210/382 (54%), Gaps = 16/382 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++  + Q+ +IQ  L ++         R + SIF G
Sbjct: 5   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPQQQYIQHLLADLDQQLDFVQQRQLHSIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   ++IA +L  IA+    S N+EIT+EANP + E   F GYR+AGV R+S+GV
Sbjct: 65  GGTPSLFSAESIAFLLAQIAQRIPFSQNIEITLEANPGTAEAERFLGYRQAGVTRLSMGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +Q L+ LGR HN++EA  A+  A+   F R + DL++ LP Q++     +L +A++
Sbjct: 125 QSFHDQQLQLLGRIHNSNEAKKAVDFAKAAGFERFNLDLMHGLPNQSVDSALSDLAQAIA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF          LP ++    ++        A G   YE S +
Sbjct: 185 LAPPHLSWYQLTIEPNTLFASKPP----RLPDDDDLWQIFEAGHQKLLAAGYQQYETSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+ IG GAH +V     ++   S  KHP+ +L+     G   
Sbjct: 241 AKPGFQCEHNLNYWRFGDYLAIGCGAHGKVSFSDGQILRYSQTKHPKGYLQ-----GQYR 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQ 372
            ++ ++  + +  EF M   RL E +   D+E   G  L   + + +  L++   +ER +
Sbjct: 296 YQQHYVEWQDRPFEFFMNRFRLLEAVPKADFERFTGLGLNVIEKQIDEALKQDYIVERTE 355

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T+ G   L+ ++    
Sbjct: 356 S--WQITEHGKLFLNDLLTLFL 375


>gi|319942265|ref|ZP_08016580.1| coproporphyrinogen oxidase [Sutterella wadsworthensis 3_1_45B]
 gi|319804138|gb|EFW01038.1| coproporphyrinogen oxidase [Sutterella wadsworthensis 3_1_45B]
          Length = 401

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 140/391 (35%), Positives = 208/391 (53%), Gaps = 18/391 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEMQW---MRQLTGPR 69
            L +Y+HWP+CV+KCPYCDFNSH            +  +    L +++           R
Sbjct: 15  PLSIYLHWPWCVRKCPYCDFNSHRLPASTADRLAFESAYAAGVLQDLEAWCRQAPEIADR 74

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I SIF GGGTPSL+  + +  +L GI   + ++ + EIT+EANP + E   F+ +R AG
Sbjct: 75  PIVSIFVGGGTPSLMSGETVERLLTGIRSRFRLTEDCEITMEANPGTAESEKFKAFRAAG 134

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           VNR+S+GVQS  ++ LR LGR H A +A AAI +AR  F   + DL+YALP +++   +M
Sbjct: 135 VNRLSIGVQSFSDEKLRRLGRIHTADDARAAIDMARRSFENFNLDLMYALPGESIADLQM 194

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL  ALS    HLS YQLTIE GT F K   +    LP  +   ++ ++ ++I +  G  
Sbjct: 195 ELAEALSSGATHLSCYQLTIEPGTAFEKRLPE---DLPDLDETAEMGDVVEAILAQAGYT 251

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV----GSHRVAISIEKHPESWL 305
            YE+S ++  G +  HNLNYW +GDY+  GPGAH ++ V    G   +  +   +P  WL
Sbjct: 252 RYEVSGYAQPGRQCRHNLNYWMFGDYLAAGPGAHGKLSVVNAEGFSILREARRVNPRKWL 311

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQ 363
           + +   G    E  F+  E +  EF++  LRL  G+    +   +G  L+        L+
Sbjct: 312 EALEATGSGAEESHFVPPEDRPFEFMLNALRLLNGVPASLYAERSGLPLESILPQLERLR 371

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           R G +      R+  T+RG+  L  V     
Sbjct: 372 RDGLLS-ADPDRIAPTRRGLDFLSDVQEAFL 401


>gi|296386884|ref|ZP_06876383.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAb1]
          Length = 384

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 209/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++        R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLHHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++  AHG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDAHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             LR ++RG   L+ ++ +  
Sbjct: 363 QHLRPSERGQLFLNDLLQHFL 383


>gi|206969798|ref|ZP_03230752.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH1134]
 gi|206735486|gb|EDZ52654.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH1134]
          Length = 379

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     SI +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSIKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + +     ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETEFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVFAKQLQSNQEQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|257085436|ref|ZP_05579797.1| coproporphyrinogen III oxidase [Enterococcus faecalis Fly1]
 gi|256993466|gb|EEU80768.1| coproporphyrinogen III oxidase [Enterococcus faecalis Fly1]
          Length = 382

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 196/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQKMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q     GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMNNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFHEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|227503125|ref|ZP_03933174.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49725]
 gi|227076186|gb|EEI14149.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49725]
          Length = 379

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 184/385 (47%), Gaps = 16/385 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSI 71
           +   G+Y+H PFC  +C YCDFN++         +    ++ +   E++      G R+ 
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDKELEMAAGRVG-RTA 60

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSL+  Q ++ ILD +   + +S + E+T E+NP S     F     AG N
Sbjct: 61  DTVFIGGGTPSLLGGQGLSRILDTVRSTFGLSPDAEVTTESNPESTSPEYFAALADAGFN 120

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RISLG+QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       
Sbjct: 121 RISLGMQSASHSVLQVLERAHTPGRAFDAAREAREAGFQHVNLDMIYGTPTETDDNVRET 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S     G   
Sbjct: 181 LDRVLETGVDHVSAYSLIVEDGTRMARKVNKGLLPAPDEDVLARRYEMISSTLEDAGFEW 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN S  G E  HN  YW  G++ G GPGAHS +            KHP  +++ +  
Sbjct: 241 YEVSNWSLPGGECEHNRIYWVDGNWWGAGPGAHSHLGDERFFNV----KHPNRYIQTLGN 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               + + E L+S  +  E +M+GLRLREGI        A         +    +G +ER
Sbjct: 297 GELPIKDSETLTSPDRHMEKVMLGLRLREGIPEAWLGSHA-----APALKGFIDRGLLER 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+R T+ G  + D ++++L +
Sbjct: 352 A-GQRVRVTKPGRLLADGIVSDLLI 375


>gi|324115030|gb|EGC08995.1| radical SAM superfamily protein [Escherichia fergusonii B253]
          Length = 378

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
                + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESLRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|300928102|ref|ZP_07143647.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 187-1]
 gi|300463868|gb|EFK27361.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 187-1]
          Length = 378

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 208/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE N F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEANRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|138896080|ref|YP_001126533.1| coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248974|ref|ZP_03147674.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           G11MC16]
 gi|134267593|gb|ABO67788.1| Coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211850|gb|EDY06609.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           G11MC16]
          Length = 379

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 130/380 (34%), Positives = 194/380 (51%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC   C YCDFN      +   ++++Q+   EM+W     G   + ++F GGG
Sbjct: 4   SAYFHIPFCAHICHYCDFNKVFAAGQ-PIDDYLQAMDKEMEWTAAEFGS-QLKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++EP  +  +L+ I K++       E T+EANP  +        R AGVNR+S+GVQ
Sbjct: 62  TPTVLEPVQLGRLLESIHKHFQFHPQTAEFTVEANPDGLTKEKLAILRDAGVNRLSIGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ +GR H   +A  A+ +AR   F  +S DL+Y LP QT+ Q+  +L+ A S 
Sbjct: 122 AFDDELLQAIGRTHRRGDAERAVAMAREAGFENISLDLMYGLPGQTLEQFLADLETAFSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y L IE  T+FY   ++G L LP E     +Y      T AHG   YEISN++
Sbjct: 182 HVPHLSAYSLIIEPKTIFYNEWRNGRLRLPGEEAEAVMYEAAMERTVAHGYQQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F G ES HNL YW   +Y GIG GAHS +          I      +++ V +      +
Sbjct: 242 FPGFESQHNLVYWNNEEYYGIGAGAHSYIDGVRRANIGPI----RHYIEKVERGEWPHRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              L+  +Q +E + +GLR  EG+S   +    GR +     E  R     G +E    +
Sbjct: 298 VHRLTFREQMEEEMFLGLRKTEGVSKARFRQKFGREMSDMFGEAIRREIENGRLEETA-T 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R T+RG  + + V A   
Sbjct: 357 HVRLTKRGKLLGNEVFAAFL 376


>gi|264679918|ref|YP_003279827.1| oxygen-independent coproporphyrinogen [Comamonas testosteroni
           CNB-2]
 gi|262210433|gb|ACY34531.1| putative oxygen-independent coproporphyrinogen [Comamonas
           testosteroni CNB-2]
          Length = 409

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 215/376 (57%), Gaps = 10/376 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+KKCPYCDFNSH   +   + ++ +I + + +++    L   R++ S+F
Sbjct: 35  PLSLYVHLPWCLKKCPYCDFNSHAWAKGDALPEDRYIDALMADLESALPLIWGRTVHSVF 94

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+++  ++ G+     +  + EIT+EANP + E + F+ +R AGVNR+S+
Sbjct: 95  MGGGTPSLFSPESMDKLIAGLRARLRMEPDCEITMEANPGTFEKDRFKAFRAAGVNRLSI 154

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ L+ +GR H+A++A AA+  A + F   + DL+YALP Q+M   + ++  AL
Sbjct: 155 GVQSFDDRYLQAVGRVHDAAQAQAAVREAADNFETFNIDLMYALPGQSMVDLQRDVDTAL 214

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+A  HLS+Y LTIE  T F K       V+P ++ A ++ +L  + T A G+  YE+S 
Sbjct: 215 SFAPPHLSIYHLTIEPNTYFAKYPP----VVPEDDTAYEMLDLITASTRAAGMQRYEVSA 270

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G +  HN NYW++GDY+GIG GAHS++      V     + P  ++ M    G  +
Sbjct: 271 YAKDGHQCFHNSNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRFRDPARYMDMALA-GTPL 329

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            +   +       E+++  LRLR G +++++    G  +          Q +G I R   
Sbjct: 330 AQDNEVKRADLPFEYMLNALRLRGGFALQEFMERTGLPMSAIAKGLDQAQAKGLISR-DL 388

Query: 374 SRLRCTQRGMTMLDSV 389
            R+  T+RG   L  +
Sbjct: 389 GRVVPTERGFDFLSDL 404


>gi|254243485|ref|ZP_04936807.1| hypothetical protein PA2G_04301 [Pseudomonas aeruginosa 2192]
 gi|126196863|gb|EAZ60926.1| hypothetical protein PA2G_04301 [Pseudomonas aeruginosa 2192]
          Length = 384

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 209/381 (54%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRMSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++   HG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDEHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDGLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             LR ++RG   L+ ++ +  
Sbjct: 363 QHLRPSERGQLFLNDLLQHFL 383


>gi|229019542|ref|ZP_04176358.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1273]
 gi|229025783|ref|ZP_04182182.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1272]
 gi|228735491|gb|EEL86087.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1272]
 gi|228741708|gb|EEL91892.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1273]
          Length = 379

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYKQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKIEFQKKFNMEMDQVFAKQLQSNQEQGLLEERD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|271963813|ref|YP_003338009.1| coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
 gi|270506988|gb|ACZ85266.1| Coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
          Length = 403

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 122/395 (30%), Positives = 190/395 (48%), Gaps = 20/395 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
           ++ + G G    G YVH PFCV +C YCDFN++           +++  + + E++  R 
Sbjct: 19  DSALHGLGGRPFGFYVHVPFCVTRCGYCDFNTYTASELGPGASHKDYADTAIDEVRRARA 78

Query: 65  LTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             G     + ++FFGGGTP+L+   ++  IL  I + + ++   E+T EANP SV+    
Sbjct: 79  NLGGADLPVETVFFGGGTPTLLPAGDLVRILGAIEEEFGLAPGAEVTTEANPESVDPAYL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R  G  R+S G+QS  E  L  L R H       A+  AR   F  ++ DLIY+ P 
Sbjct: 139 SELRGGGFTRMSFGMQSAREHVLEVLERRHTPGRPAHAVREAREAGFDHVNLDLIYSTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++   W   L  A+    DH+S Y L +E GT      + G+L +P ++VA D Y +  +
Sbjct: 199 ESDDDWRASLAAAIEAGPDHVSAYSLIVEDGTRLAARIRRGELPMPDDDVAADRYLIADA 258

Query: 242 ITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + +  G   YE+SN +        HNL YW  GD+ G+GPGAHS V            KH
Sbjct: 259 MLAEAGFEWYEVSNWATSEAGRCRHNLLYWTGGDWWGVGPGAHSHVGGTR----WWNVKH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P ++ + +         +E L++E +A E LM+ LRL +G  +K+ E             
Sbjct: 315 PAAYARRLASGVSPAHAREVLTAEDRAVERLMLELRLVQGFPLKEIER-------PPVVA 367

Query: 361 NLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
                G +E   F   R   T RG  + D+++ +L
Sbjct: 368 RALADGLLEMEPFKAGRAVLTLRGRLLADALVRDL 402


>gi|154502610|ref|ZP_02039670.1| hypothetical protein RUMGNA_00423 [Ruminococcus gnavus ATCC 29149]
 gi|153796802|gb|EDN79222.1| hypothetical protein RUMGNA_00423 [Ruminococcus gnavus ATCC 29149]
          Length = 385

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 126/387 (32%), Positives = 208/387 (53%), Gaps = 16/387 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFCV+KC YCDF S        +  ++ +   E+Q  R++     +SS+F GG
Sbjct: 5   LELYIHIPFCVQKCAYCDFLS-APANDAAKAEYVDALKKEIQRYREVASSYQVSSVFVGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + +  I   + + +T+  + EITIEANP +V     +G+++AG+NRIS G+Q
Sbjct: 64  GTPSILSCEQMGEIFKMLRQVFTIDRDAEITIEANPGTVTEEKLEGWKQAGINRISFGLQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+  + L+ LGR H   E   +  +AR   F  ++ DLI A+P QT+  WE  L+     
Sbjct: 124 SVNNEELKMLGRIHTYEEFRESYDMARQAGFDNINIDLISAIPGQTVKSWEHTLRTVAEL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMH------KDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             +H+S Y L IE+GT FY+ +      ++    LP E+    +Y  T+ I   +G H Y
Sbjct: 184 HPEHISAYSLIIEEGTRFYQWYGKGQTDQEKYPPLPDEDAERQMYERTEGILEEYGFHRY 243

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G E  HNL YW   +Y+GIG GA S +    + +   +     S+++ +   
Sbjct: 244 EISNYAREGKECRHNLGYWSRVEYLGIGLGASSFISNTRYHLCTDMI----SYIERIGSG 299

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
                E E L+ E   +EF+ +GLR  +GIS   +E   G  ++    +    L+++  +
Sbjct: 300 EDLREEIEVLTKEDAMEEFMFLGLRRMQGISGTQFENCFGNTIEEIYGDVIEKLEQEKML 359

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E V+  ++R T+RG+ + + V     +
Sbjct: 360 E-VKEDKIRLTKRGIDVSNYVFCEFLL 385


>gi|218550202|ref|YP_002383993.1| coproporphyrinogen III oxidase [Escherichia fergusonii ATCC 35469]
 gi|218357743|emb|CAQ90387.1| putative oxidoreductase [Escherichia fergusonii ATCC 35469]
 gi|323966472|gb|EGB61905.1| radical SAM superfamily protein [Escherichia coli M863]
 gi|327251723|gb|EGE63409.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli STEC_7v]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
                + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESLRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|312862665|ref|ZP_07722905.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus vestibularis F0396]
 gi|311101525|gb|EFQ59728.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus vestibularis F0396]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 208/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++ + + E +    L   + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLSALIREWE----LLNIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++         G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKKGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + + 
Sbjct: 294 RLHEEHLTKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|218555514|ref|YP_002388427.1| coproporphyrinogen III oxidase [Escherichia coli IAI1]
 gi|218696553|ref|YP_002404220.1| coproporphyrinogen III oxidase [Escherichia coli 55989]
 gi|293449285|ref|ZP_06663706.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|300824810|ref|ZP_07104914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 119-7]
 gi|331669701|ref|ZP_08370547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA271]
 gi|331678949|ref|ZP_08379623.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H591]
 gi|218353285|emb|CAU99248.1| putative oxidoreductase [Escherichia coli 55989]
 gi|218362282|emb|CAQ99903.1| putative oxidoreductase [Escherichia coli IAI1]
 gi|291322375|gb|EFE61804.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|300522717|gb|EFK43786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 119-7]
 gi|323946547|gb|EGB42570.1| radical SAM superfamily protein [Escherichia coli H120]
 gi|331063369|gb|EGI35282.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli TA271]
 gi|331073779|gb|EGI45100.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H591]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|332999702|gb|EGK19287.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri VA-6]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRSRLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|194431586|ref|ZP_03063877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shigella dysenteriae 1012]
 gi|194419942|gb|EDX36020.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shigella dysenteriae 1012]
 gi|320181040|gb|EFW55961.1| coproporphyrinogen III oxidase [Shigella boydii ATCC 9905]
 gi|332086884|gb|EGI92020.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella boydii 5216-82]
 gi|332087624|gb|EGI92751.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella dysenteriae 155-74]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|325963351|ref|YP_004241257.1| coproporphyrinogen III oxidase anaerobic [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469438|gb|ADX73123.1| coproporphyrinogen III oxidase, anaerobic [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 393

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 122/398 (30%), Positives = 186/398 (46%), Gaps = 20/398 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
                G    + G+YVH PFC  +C YCDFN++      G   Q+ +  +  +E+    +
Sbjct: 3   AQAADGAADRAFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYAGTAASEVALAAK 62

Query: 65  LTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +        R +S++FFGGGTP+L+   ++ALIL      W +    E+T EANP SV  
Sbjct: 63  VLAGSGLPARKLSTVFFGGGTPTLLPADDLALILRRAIDEWGIEDGAEVTTEANPDSVTP 122

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            +    ++AG  R+S G+QS     L+ L R H  S     +  AR     +S DLIY  
Sbjct: 123 ESLAVLKEAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPQVVQWAREAGLAVSLDLIYGT 182

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +++  W   L+ ALSY  DH+S Y L +E GT      + G++    ++   D Y L 
Sbjct: 183 PGESLADWRHSLETALSYRPDHISAYALIVEDGTKLAAQMRRGEVPGIDDDDHADKYELA 242

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             + +  GL  YE+SN +   G    HNL YWR  D+ GIGPGAHS V      V     
Sbjct: 243 DQLITEAGLGWYEVSNWARTPGQACRHNLAYWRGDDWWGIGPGAHSHVGG----VRWWNV 298

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   + +       +E L +E +  E +M+  RL+ G+ +        R +    
Sbjct: 299 KHPTAYAGRLAQGLSPAAGRETLDAETRNIERVMLEARLKSGLQLSTLAAAGRREV---- 354

Query: 359 ERNLQRQGFIERVQ--FSRLRCTQRGMTMLDSVIANLA 394
              L   G +E        L  T +G  + D+V+  + 
Sbjct: 355 -AGLIADGLVEPAAALNGTLVLTLKGRLLADAVVRRVL 391


>gi|238896486|ref|YP_002921224.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548806|dbj|BAH65157.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 379

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 208/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAHYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGLAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+   +  +HP  +++     G  +
Sbjct: 242 AKPGFQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTAKTRHPRGYME-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
             +  +    +  EF M   RL E     ++ +  G +   +  + +  +     +E  Q
Sbjct: 297 ERQHDVEEADKPFEFFMNRFRLLEAAPRAEFSLYTGLDEQVIRQQIDAAIAEGYLLEDAQ 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T+ G   L+S++  L +
Sbjct: 357 N--WQITEHGKLFLNSLL-ELFL 376


>gi|127512064|ref|YP_001093261.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella loihica PV-4]
 gi|126637359|gb|ABO23002.1| coproporphyrinogen III oxidase, anaerobic [Shewanella loihica PV-4]
          Length = 379

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 209/382 (54%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++   L +++        RS+ SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQHGELPQQEYVDDLLNDLKNDAAYVQGRSLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  +LDG+      + ++EIT+EANP ++E ++F  Y  AGV R+S+GV
Sbjct: 66  GGTPSLFDASQIERLLDGVRAQIPFAPDIEITMEANPGTLEHDDFSAYCAAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+  EA +AA   A+  +   + DL++ LP Q+  +   ++ +A +
Sbjct: 126 QSFSSDKLNLLGRIHDKHEAEVAATKAAQAGYQSFNLDLMHGLPNQSFEEAMRDIDKAAA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFHSKPP----QLPDDEALWQIYEQGQQRLAALGYEQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-SHRVAISIE-KHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH ++ +    R+  +++ KHP+ +L       + 
Sbjct: 242 AKPGYQCRHNLNYWQFGDYLGIGCGAHGKITMAEDQRIYRTVKIKHPKGYL---GAGDYL 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL--QRQGFIERVQ 372
             + E L +E +A E+LM  LRL   I  +++E   G + ++  E       +G +  +Q
Sbjct: 299 FDKSEVL-AEDRALEYLMNRLRLMSPIPKREFESRTGLSAEVLNEGMARGAAKGLV-IIQ 356

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ ++    
Sbjct: 357 DEHWQLTAKGQMFVNELLGLFC 378


>gi|83589446|ref|YP_429455.1| coproporphyrinogen III oxidase, anaerobic [Moorella thermoacetica
           ATCC 39073]
 gi|83572360|gb|ABC18912.1| coproporphyrinogen III oxidase, anaerobic [Moorella thermoacetica
           ATCC 39073]
          Length = 388

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 191/379 (50%), Gaps = 9/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFCV+KC YCDF S+  +       + +    EM+       P   +++F GGG
Sbjct: 15  HIYIHIPFCVRKCNYCDFISYPEQSPEVMAVYCRLLEEEMKLAAGTWQPGPAATVFLGGG 74

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++    +  IL  +   +      E+++EANP ++ +   +  R AGVNR+SLGVQS
Sbjct: 75  TPTILPADLLERILVAVEGYFNRQPEAEVSVEANPGTITLEKLRVLRSAGVNRLSLGVQS 134

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H   +   A HLAR   F  ++ DLI+ LP QT+  W+  L+ AL+  
Sbjct: 135 FDDRLLKAMGRIHRRRDIYQAYHLARRAGFANINLDLIFGLPGQTLENWQATLREALALQ 194

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HL+ Y L +E+ T + ++   G+L LP E + + +Y   +   +A G   YEISN + 
Sbjct: 195 PEHLAAYSLQVEEDTPWGRLAAAGNLNLPGEELELAMYQEAREKLAAAGYQQYEISNFAR 254

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A S  +    +      K+ E +   +        E 
Sbjct: 255 PGYRCRHNVTYWLNHPYLGLGAAAASSWRGERWQNY----KNLEQYGAALSAGRLPRAEI 310

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFSR 375
           E  +  QQ  E + M LRL  G++++ +    G++           L R G IE VQ   
Sbjct: 311 EVTTPRQQMAETMFMSLRLLAGVNLQAFRQRFGKDAREVYAGEMERLLRAGLIE-VQGHH 369

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T+RG+ + + V A   
Sbjct: 370 LKLTERGLPLANEVFAAFV 388


>gi|312110165|ref|YP_003988481.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y4.1MC1]
 gi|311215266|gb|ADP73870.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y4.1MC1]
          Length = 380

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 127/380 (33%), Positives = 200/380 (52%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC + C YCDFN      +   + ++Q+   EM+   +      + ++F GGG
Sbjct: 4   SAYFHIPFCAQICYYCDFNKVFFHGQ-PVDEYLQAMEKEMKRTMEAFPADRLDTLFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++E + +   L  I K++  S+  VE T EANP+ +     Q  ++AGVNR+S GVQ
Sbjct: 63  TPTVLEMKQLDFFLQSIYKHFRFSAAEVEFTFEANPNELSKEKLQLLKEAGVNRLSFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++  L+ +GR H   + I  I LA+ I F  +S DL+Y LP+QT+ Q+  +L+ A S 
Sbjct: 123 TFDDALLKAIGRTHRYEDVIKTIALAKEIGFENISIDLMYGLPRQTVAQFLTDLEIAFSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y L IE  T+FY + + G L+LPSE     +Y         H  H YEISN++
Sbjct: 183 DVQHISAYSLIIEPKTVFYNLMRKGKLLLPSEEEEAKMYEEAMRQMEMHDYHQYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +S HNL YW   +Y GIG GAHS V          I+K    ++  V + G   +E
Sbjct: 243 RPGFQSRHNLTYWNNEEYYGIGAGAHSYVGGVRRANVRPIKK----YIAKVEETGFPYLE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
              ++  +Q +E + +GLR  EG+S + +    G ++     + + R+   G +E  + +
Sbjct: 299 AHHVTKSEQMEEEMFLGLRKTEGVSKQRFFEKFGMSIPDVFGQAVAREKQKGLLEETE-T 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R TQRG  + + V     
Sbjct: 358 HIRLTQRGKLLGNEVFQAFI 377


>gi|325498512|gb|EGC96371.1| coproporphyrinogen III oxidase [Escherichia fergusonii ECD227]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
                + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESLRDVEATDKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|16130856|ref|NP_417430.1| predicted oxidoreductase, HemN family [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109732|ref|AP_003512.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. W3110]
 gi|170082507|ref|YP_001731827.1| oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
 gi|188492406|ref|ZP_02999676.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 53638]
 gi|238902077|ref|YP_002927873.1| putative oxidoreductase [Escherichia coli BW2952]
 gi|253772207|ref|YP_003035038.1| coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300947686|ref|ZP_07161855.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 116-1]
 gi|300954198|ref|ZP_07166663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 175-1]
 gi|301643691|ref|ZP_07243730.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 146-1]
 gi|307139640|ref|ZP_07498996.1| coproporphyrinogen III oxidase [Escherichia coli H736]
 gi|331643648|ref|ZP_08344779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H736]
 gi|1723868|sp|P52062|YGGW_ECOLI RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein YggW
 gi|882484|gb|AAA69122.1| ORF_o378 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789325|gb|AAC75992.1| predicted oxidoreductase, HemN family [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675765|dbj|BAE77018.1| predicted oxidoreductase [Escherichia coli str. K12 substr. W3110]
 gi|169890342|gb|ACB04049.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
 gi|188487605|gb|EDU62708.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 53638]
 gi|238862748|gb|ACR64746.1| predicted oxidoreductase [Escherichia coli BW2952]
 gi|253323251|gb|ACT27853.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260448002|gb|ACX38424.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           DH1]
 gi|284922898|emb|CBG35987.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli 042]
 gi|300318782|gb|EFJ68566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 175-1]
 gi|300452732|gb|EFK16352.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 116-1]
 gi|301077893|gb|EFK92699.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 146-1]
 gi|309703310|emb|CBJ02646.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli ETEC H10407]
 gi|315137552|dbj|BAJ44711.1| coproporphyrinogen III oxidase [Escherichia coli DH1]
 gi|315614883|gb|EFU95521.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 3431]
 gi|323936042|gb|EGB32337.1| radical SAM superfamily protein [Escherichia coli E1520]
 gi|331037119|gb|EGI09343.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli H736]
          Length = 378

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEATDKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|302528865|ref|ZP_07281207.1| coproporphyrinogen III oxidase [Streptomyces sp. AA4]
 gi|302437760|gb|EFL09576.1| coproporphyrinogen III oxidase [Streptomyces sp. AA4]
          Length = 423

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 125/396 (31%), Positives = 193/396 (48%), Gaps = 18/396 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQ 64
           E  + G G+   GVYVH PFC  +C YCDFN++         +   ++ +   E++   +
Sbjct: 36  ETALAGLGTRPFGVYVHVPFCATRCGYCDFNTYTAGELGSAASPRSWLDALRRELELGAE 95

Query: 65  LTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           + G      ++F GGGTPSL+    +A +LDG+   + ++   E+T E+NP S     F 
Sbjct: 96  ILGSAPPAETVFVGGGTPSLLGADGLAEVLDGVRSAFGLAPGAEVTTESNPESTSPEFFA 155

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
           G R AG  R+SLG+QS     L+ L R H     + A   AR   F  ++ DLIY  P +
Sbjct: 156 GIRDAGYTRVSLGMQSAARHVLKVLDRVHTPGRPVDAAREARAAGFEHVNLDLIYGTPGE 215

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +      L   LS  VDH+S Y L +E GT   +  + G+L  P ++     Y L  S+
Sbjct: 216 RVEDLRASLDAVLSAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDTLASYYELIDSV 275

Query: 243 TSAHGLHAYEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            ++ GL  YE+SN  S   A   HNL YW+ GD+ G GPGAHS V      V     KHP
Sbjct: 276 LASAGLTWYEVSNWVSDEAARCRHNLGYWQGGDWWGAGPGAHSHVGG----VRWWNVKHP 331

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +  ++ +      ++E L+ E +  E +M+ LR+ +G+++   +    +       R 
Sbjct: 332 AKYSSLLAEGQSPEADREVLTPEDRHLERIMLELRISDGLALSALDEAGLKE-----ARA 386

Query: 362 LQRQGFIERVQF---SRLRCTQRGMTMLDSVIANLA 394
              +G +E+       R   T RG  + D+V+  LA
Sbjct: 387 AAAEGLLEQSDLDSQGRAVLTDRGRLLADAVVRRLA 422


>gi|229169065|ref|ZP_04296781.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH621]
 gi|228614474|gb|EEK71583.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH621]
          Length = 379

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 116/381 (30%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++Q    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLQYLEKEIINTVQKVPFESMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRRHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFTKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E     
Sbjct: 299 VHPVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLENRD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T++G  + + V  +  +
Sbjct: 358 HVCLTRKGKLLGNEVFQSFLI 378


>gi|256821438|ref|YP_003145401.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
 gi|256794977|gb|ACV25633.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
          Length = 410

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 125/395 (31%), Positives = 203/395 (51%), Gaps = 19/395 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR-----YKVGQENFIQSFLTEMQWMRQL 65
           M+   +  L +Y+H P+C++KCPYCDFNSH  +       + ++ +I   L +++    L
Sbjct: 1   MSLLTNPPLSLYIHIPWCIRKCPYCDFNSHGIKQLGGLDDIPEQEYIDRLLVDLEQELPL 60

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R + SIF GGGTPSL   + +  ++ G+        ++EIT+EANP + E   F G+
Sbjct: 61  VWGRRLHSIFIGGGTPSLFSAEGMDRLISGVRARIPFEGDIEITMEANPGTFEAERFAGF 120

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R+AGVNR+S+GVQS + + L  LGR HN  +AIAA   A    F   + DL++ LP QT+
Sbjct: 121 RQAGVNRLSIGVQSFDARHLELLGRVHNPEQAIAAAEFAHQAGFSSFNLDLMHGLPDQTI 180

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            Q   +LQ A+     H+S YQLTIE  TLFY+        LP ++    +    Q++  
Sbjct: 181 EQALSDLQTAIDLKPQHISWYQLTIEPNTLFYQQPP----TLPIDDTLWTIQEQGQALLQ 236

Query: 245 AHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHP 301
            H    YE+S ++      S HNLNYW++GDY+GIG GAH ++           +  +HP
Sbjct: 237 QHSYGQYEVSAYAREPKFRSQHNLNYWQFGDYLGIGAGAHGKITRLDLEQIQRTTKSRHP 296

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECE 359
           + +L+    +   +   + + + +   EF++  LRL +G+    ++   G  L       
Sbjct: 297 KDYLQKSVAD---IRTSQPIPAPELPFEFMLNALRLLDGVPTTYFQQRTGLLLSDIQPAI 353

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                 G +   +  R+  T++G   L+ ++    
Sbjct: 354 NEAIADGLLHNSK-DRIEPTEKGSLFLNELLQRFI 387


>gi|300718250|ref|YP_003743053.1| coproporphyrinogen III oxidase [Erwinia billingiae Eb661]
 gi|299064086|emb|CAX61206.1| coproporphyrinogen III oxidase [Erwinia billingiae Eb661]
          Length = 382

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 134/376 (35%), Positives = 211/376 (56%), Gaps = 16/376 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  V  + ++Q  L ++     LT  R +S+IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGDVPHQEYVQHLLADLDADLHLTSGREVSTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     +S+  EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLSATAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSAQKLERLGRIHGPEEAKRAAQLATDLNLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPP----KLPDDDALWDIFEQGDRLLTAAGYVQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  ++      G  +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQNDGRIIRTTKTRHPRGFMA-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
             ++ +S   +  EF M   RL E     ++ +  G +   +  + +R L  +G++    
Sbjct: 297 DRQQEVSDSDKPFEFFMNRFRLLEAAPRAEYPLYTGLDECSIRPQIDRAL-SEGYLTETA 355

Query: 373 FSRLRCTQRGMTMLDS 388
            S  + T++G   L+S
Sbjct: 356 ES-WQVTEKGKLFLNS 370


>gi|325576990|ref|ZP_08147561.1| coproporphyrinogen dehydrogenase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160948|gb|EGC73067.1| coproporphyrinogen dehydrogenase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 382

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 133/385 (34%), Positives = 210/385 (54%), Gaps = 18/385 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + ++ ++Q  + +++      +     R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEQEYVQHLIADLEADLEKYQASIQNRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++I L+L  I +    S N+EIT+EANP +VE   F+GY  AGV RI
Sbjct: 66  IFIGGGTPSLFSAESIKLLLAEIQRRIPFSENIEITMEANPGTVEAERFKGYVDAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A+ LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVSLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELAPPHLSWYQLTIEPNTMFAYRPP----TLPDDDELWDIFEQGHQLLTEAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++     ++   S  KHP+ +L+     
Sbjct: 242 TSAYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLTFSDGKILRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +A EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVEKNDRAFEFFMNRFRLLEAVPKQEFEHYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
                  + T+ G   L+ ++A   
Sbjct: 357 ET-LDSWQITEHGKLFLNELLALFF 380


>gi|228476821|ref|ZP_04061466.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus salivarius SK126]
 gi|228251395|gb|EEK10540.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus salivarius SK126]
          Length = 378

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 210/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +    L   + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIREWE----LLDIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESIDSLKAAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + + 
Sbjct: 294 RLHEEHLTKSEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|62391133|ref|YP_226535.1| coproporphyrinogen III oxidase [Corynebacterium glutamicum ATCC
           13032]
 gi|161486712|ref|NP_601492.2| coproporphyrinogen III oxidase [Corynebacterium glutamicum ATCC
           13032]
 gi|41326472|emb|CAF20634.1| PUTATIVE ANAEROBIC COPROPORPHYRINOGEN III OXIDASE [Corynebacterium
           glutamicum ATCC 13032]
          Length = 380

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 182/382 (47%), Gaps = 14/382 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
            GVY+H PFC  +C YCDFN++         G + ++ S   E++  +  L  PR   +I
Sbjct: 4   FGVYIHVPFCSTRCGYCDFNTYTAGELGSTAGPDTYLDSLEVELEMAVASLDNPRQAETI 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI    +A +L  +   + ++   E+T E+NP S     F G R+AG NRIS
Sbjct: 64  FIGGGTPSLIGADGLARVLGAVRNTFGIADGAEVTTESNPESTSPEFFDGLREAGYNRIS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS     L+ L R H     +AA   AR   F  ++ D+IY  P +T       L  
Sbjct: 124 LGMQSASSSVLKVLDRTHTPGRPVAAAKEAREAGFEHVNLDMIYGTPTETDDDVRKTLDA 183

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L   VDH+S Y L +E GT   +  + G+L  P E+V  D + L  +   + G   YE+
Sbjct: 184 VLEANVDHVSAYSLIVEDGTAMARKVRKGELPAPDEDVYADRFELIDARLRSAGFDWYEV 243

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN+ YW  GD+ G GPGAHS +            KHP  +   +     
Sbjct: 244 SNWAKPGGECKHNMGYWVDGDWWGAGPGAHSHIGDRRFYNI----KHPARYSAQIAAGEL 299

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            + E E L++E    E +M+GLRL++G+ +  +                   G +     
Sbjct: 300 PIKETERLTAEDHHTERVMLGLRLKQGVPLNLFA-----PAARPVIDRHIAGGLLHVNAL 354

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             L  T  G  + D +IA++ +
Sbjct: 355 GNLAVTDAGRLLADGIIADILL 376


>gi|71900256|ref|ZP_00682393.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
 gi|71729969|gb|EAO32063.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
          Length = 383

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 136/380 (35%), Positives = 218/380 (57%), Gaps = 10/380 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F
Sbjct: 4   PPPLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I   L  +A    ++ + EIT+E NP + E   F  Y  AG+NR+S 
Sbjct: 64  LGGGTPSLFPPEAIDRFLQIVAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSF 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA
Sbjct: 124 GIQSFNDAALRRLGRIHDSLQAEHAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + A  HLS YQLT+E  T+FY         +P ++ A ++   TQ + +  G   YE+S
Sbjct: 184 FALAPTHLSYYQLTLEPNTVFYARPPQ---GIPDDDAAWEMQEHTQRLLAEAGYQHYEVS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNG 312
            ++  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L       
Sbjct: 241 AYAREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDN-AGTV 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
            A+   E + + +   E+++  LRLREG  ++D+ +  G  ++      R    +G++ R
Sbjct: 300 SAIGGDEIVPTARLPFEYMLNLLRLREGFRLQDFAVRTGLTVESIHAALREAVARGWL-R 358

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            +   +  T+ G+   + VI
Sbjct: 359 CELEHVIPTELGLRFANDVI 378


>gi|302534347|ref|ZP_07286689.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
 gi|302443242|gb|EFL15058.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
          Length = 416

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 194/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G G   LG Y+H P+C  +C YCDFN++      G       +EN+  + + E++  
Sbjct: 27  ALEGAGERPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRENYADTLIDEVRLA 86

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR++ ++F GGGTP+L+   ++  +L  I   + ++ + E+T EANP SV   
Sbjct: 87  RKVLGDDPRAVRTVFVGGGTPTLLPAGDLVRMLAAIRDEFGLAEDAEVTTEANPESVNPE 146

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R  G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 147 YLAELRAGGFNRISFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFEHVNLDLIYGT 206

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 207 PGESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 266

Query: 240 QSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             + +  G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 267 DQVMAEAGYSWYEVSNWATTEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 322

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   + +       +E LS+E +  E +++ LRL +G+ +            +  
Sbjct: 323 KHPGAYAAALAEGRSPGAGRELLSAEDRRVERILLELRLVDGVLLSLLA-----PAGLAA 377

Query: 359 ERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
            R     G ++    +  R   T RG  + D+V+ +L 
Sbjct: 378 SRRALADGLLDPAPYEAGRAVLTLRGRLLADAVVRDLV 415


>gi|24114210|ref|NP_708720.1| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 301]
 gi|30064271|ref|NP_838442.1| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 2457T]
 gi|74313512|ref|YP_311931.1| coproporphyrinogen III oxidase [Shigella sonnei Ss046]
 gi|300921297|ref|ZP_07137666.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 115-1]
 gi|24053357|gb|AAN44427.1| putative oxidase [Shigella flexneri 2a str. 301]
 gi|30042528|gb|AAP18252.1| putative oxidase [Shigella flexneri 2a str. 2457T]
 gi|73856989|gb|AAZ89696.1| putative oxidase [Shigella sonnei Ss046]
 gi|281602291|gb|ADA75275.1| putative Coproporphyrinogen III oxidase-like Fe-S oxidoreductase
           [Shigella flexneri 2002017]
 gi|300411759|gb|EFJ95069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 115-1]
 gi|313648005|gb|EFS12451.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri 2a str. 2457T]
 gi|323167993|gb|EFZ53682.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella sonnei 53G]
 gi|332752998|gb|EGJ83382.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri 4343-70]
 gi|332753799|gb|EGJ84178.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-671]
 gi|332754707|gb|EGJ85073.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri 2747-71]
 gi|332765372|gb|EGJ95590.1| radical SAM superfamily protein [Shigella flexneri 2930-71]
 gi|333000286|gb|EGK19869.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-218]
 gi|333000457|gb|EGK20038.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-272]
 gi|333015144|gb|EGK34487.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-304]
 gi|333015295|gb|EGK34637.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella flexneri K-227]
          Length = 378

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|124267888|ref|YP_001021892.1| putative anaerobic coproporphyrinogen III oxidase oxidoreductase
           protein [Methylibium petroleiphilum PM1]
 gi|124260663|gb|ABM95657.1| putative anaerobic coproporphyrinogen III oxidase oxidoreductase
           protein [Methylibium petroleiphilum PM1]
          Length = 417

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 130/397 (32%), Positives = 209/397 (52%), Gaps = 25/397 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR------------------YKVGQENFIQSFLTEM 59
            L +YVH P+C+KKCPYCDFNSH                         +  ++ +   ++
Sbjct: 25  PLALYVHLPWCLKKCPYCDFNSHELTTAPMLRPDRPGAGTGRALDAGVESRYLDALRADL 84

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +    L   R + S+F GGGTPSL  P  I  +L  +     +    EIT+EANP + E 
Sbjct: 85  EGALPLVWGRRVVSVFIGGGTPSLFSPDAIGQLLADVRARLPLEPGCEITLEANPGTFER 144

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
             F+ +R AGV R+S+GVQS ++  L+ LGR H+ ++A+AA+  AR+ F   + DL+YAL
Sbjct: 145 ERFRAFRAAGVTRLSIGVQSFDDAKLKALGRVHDRAQALAAVEEARSAFDTFNLDLMYAL 204

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++   E ++++AL++   HLS+Y LT+E  T F          LP ++ A  + +  
Sbjct: 205 PGQSLADCEADVRQALTFEPPHLSVYHLTLEPNTQFASRPP---AGLPDDDTAFGMLDRI 261

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
             +T+A GL  YE+S ++  G    HNLNYW++GDY+GIG GAHS++      +  +  +
Sbjct: 262 TELTTAAGLGRYEVSAYARPGHRCQHNLNYWQFGDYLGIGAGAHSKLSFAHRVLRQTRWR 321

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--E 357
            P ++L+   + G AV  +  ++ ++   EF++  LRLREG  +  +    G  +     
Sbjct: 322 EPAAYLRQAVE-GAAVSNEHEVARQELPFEFMLNALRLREGFELARFAERTGLAVTAIQR 380

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                + +G IER    R+  T+RG   L  + +   
Sbjct: 381 GLEAAEAKGLIER-DLQRVWPTERGFDFLSDLQSLFL 416


>gi|323669736|emb|CBJ94860.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella bongori]
          Length = 378

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 210/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAGAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGRAMQTLLDGVRARLNLAVDAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A +LA        + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKKLGRIHGPKEAKRAANLASGLALRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKSGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  +    +  EF M   RL E     ++    G   ++  ++      QG++   + 
Sbjct: 297 ESQREVEDADKPFEFFMNRFRLLEAAPRAEFSQYTGLGEEVIRQQMDEAIAQGYVTESED 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + TQ G   L+S++  L +
Sbjct: 357 N-WQITQCGKLFLNSLL-ELFL 376


>gi|229031966|ref|ZP_04187952.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1271]
 gi|228729356|gb|EEL80347.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH1271]
          Length = 378

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTRKDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEARMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 298 VHAVTEKERMEEELFLGLRKTKGVSKIGFQKKFNLEIDQVFAKQLQSNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|103485753|ref|YP_615314.1| coproporphyrinogen III oxidase [Sphingopyxis alaskensis RB2256]
 gi|98975830|gb|ABF51981.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sphingopyxis alaskensis RB2256]
          Length = 381

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 172/382 (45%), Positives = 235/382 (61%), Gaps = 10/382 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +YVHWPFCV KCPYCDFNSHV R  V QE +  + L +++    +   R ++SIFF
Sbjct: 3   EPLALYVHWPFCVSKCPYCDFNSHV-RDSVEQEVWRAALLADLRHEAAVLPGRRVASIFF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +A ++   A  W ++ + EIT+EANP+S EV  F     AGVNR+S+G
Sbjct: 62  GGGTPSLMPAATVAAVIAEAAALWGLTDDCEITLEANPNSAEVAAFADLAAAGVNRVSIG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS + Q+L FLGR H+  EA  AI +A+  F R+SFDLIYA P QT+  WE EL  AL 
Sbjct: 122 VQSFDAQALAFLGRAHSEDEARRAIAMAQEHFARVSFDLIYARPGQTLAAWEGELADALG 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLSLYQLTIE GT F+ +   G+L +P  + A DL++ TQ++T A GL  YE+SNH
Sbjct: 182 FGTGHLSLYQLTIEPGTRFWALAAKGELTIPDGDAAADLFDATQAMTRAAGLPRYEVSNH 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YWRY DY G+GPGAH R      R A    + PE+++  V +NGH + 
Sbjct: 242 ARPGEESRHNLAYWRYADYAGVGPGAHGR----RLRQATERHRKPENFIAAVTRNGHGLK 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
            +  LS  ++A E ++MGLRL EG+ +   E  +G      +D +    L  QG +    
Sbjct: 298 VETDLSGRERATEAMLMGLRLTEGVDLARVEARSGLPRADFVDADAVARLAGQGLLV-AD 356

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             RL  T  G+ +LDS+++ + 
Sbjct: 357 GDRLAVTGAGILLLDSILSEVV 378


>gi|206976009|ref|ZP_03236919.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           H3081.97]
 gi|217961807|ref|YP_002340377.1| coproporphyrinogen III oxidase [Bacillus cereus AH187]
 gi|222097762|ref|YP_002531819.1| coproporphyrinogen iii oxidase [Bacillus cereus Q1]
 gi|229141055|ref|ZP_04269597.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST26]
 gi|206745761|gb|EDZ57158.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           H3081.97]
 gi|217065239|gb|ACJ79489.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH187]
 gi|221241820|gb|ACM14530.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           Q1]
 gi|228642333|gb|EEK98622.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST26]
 gi|324328221|gb|ADY23481.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 378

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLNIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|306836636|ref|ZP_07469602.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49726]
 gi|304567466|gb|EFM43065.1| coproporphyrinogen dehydrogenase [Corynebacterium accolens ATCC
           49726]
          Length = 379

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 123/385 (31%), Positives = 182/385 (47%), Gaps = 16/385 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSI 71
           +   G+Y+H PFC  +C YCDFN++         +    ++ +   E++      G R+ 
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDKELEMAAGRVG-RTA 60

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSL+  Q ++ ILD +   + +S + E+T E+NP S     F     AG N
Sbjct: 61  DTVFIGGGTPSLLGGQGLSRILDTVRSTFGLSPDAEVTTESNPESTSPEYFAALADAGFN 120

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RISLG+QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       
Sbjct: 121 RISLGMQSASHSVLQVLERAHTPGRAFDAAREAREAGFQHVNLDMIYGTPTETDDNVRET 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S     G   
Sbjct: 181 LDRVLETGVDHVSAYSLIVEDGTRMARKVNKGLLPAPDEDVLARRYEMISSTLEEAGFEW 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN S  G E  HN  YW  G++ G GPGAHS +            KHP  +++ +  
Sbjct: 241 YEVSNWSLPGGECEHNRIYWVDGNWWGAGPGAHSHLGDERFYNV----KHPNRYIQTLGN 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               + + E L+   +  E +M+GLRLREGI        A              +G +ER
Sbjct: 297 GELPIKDSETLTGADRHMEKVMLGLRLREGIPESWLGSHA-----APALEGFIDRGLLER 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+R T+ G  + D ++++L +
Sbjct: 352 A-GQRVRVTKPGRLLADGIVSDLLI 375


>gi|82523718|emb|CAI78499.1| coproporphyrinoben III oxidase and related Fe-S oxidoreductase
           [uncultured beta proteobacterium]
          Length = 391

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 140/383 (36%), Positives = 208/383 (54%), Gaps = 11/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S  L +Y+H P+CVKKCPYCDFNSH  +  + +  +I + L +++        R I ++F
Sbjct: 16  SPPLSLYIHLPWCVKKCPYCDFNSHASQV-IPEAAYIDALLLDLERALPDIWGRRIHTVF 74

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL     I  IL G+     +  N EIT+EANP +VE   F G+R+AGV R+SL
Sbjct: 75  FGGGTPSLFSAAGIDRILTGVRTLTQLLPNAEITLEANPGTVEAEKFAGFREAGVTRVSL 134

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   Q L+ LGR H+ SEA  A  LA   F   + DL++ALP QT+ +   ++  AL
Sbjct: 135 GIQSFNSQHLKALGRIHDDSEARRAAELAATHFDTFNLDLMFALPGQTLDEALTDIDTAL 194

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLS Y LT+E  T F          LP ++VA D++   ++  +  G+  YE S 
Sbjct: 195 AFRPPHLSAYHLTLEPNTPFG---HTAPPNLPDDDVAADMHQAIEARLTEAGMQHYETSA 251

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++     S HNLNYW++GDY+GIG GAHS++      +     KHP+ ++  V +  H +
Sbjct: 252 YARPQHASRHNLNYWQFGDYLGIGAGAHSKLSFHDRILRQMRTKHPQQYMDAVAQGTH-I 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQ 372
            +   L+      EF+M  LRL EG+    +E   G  L I C   L++   +G +    
Sbjct: 311 ADARTLTRSDLPFEFMMNALRLNEGVPSALFEERTGLPL-IVCTAGLEQARAKGLLAHDA 369

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              L+ T  G   L+ ++  L +
Sbjct: 370 MQ-LKPTLLGQRYLNDLL-ELFL 390


>gi|71274726|ref|ZP_00651014.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Dixon]
 gi|71899593|ref|ZP_00681748.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
 gi|170730032|ref|YP_001775465.1| coproporphyrinogen III oxidase [Xylella fastidiosa M12]
 gi|71164458|gb|EAO14172.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Dixon]
 gi|71730635|gb|EAO32711.1| Putative oxygen-independent coproporphyrinogen III oxidase [Xylella
           fastidiosa Ann-1]
 gi|167964825|gb|ACA11835.1| coproporphyrinogen III oxidase [Xylella fastidiosa M12]
          Length = 383

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 136/380 (35%), Positives = 217/380 (57%), Gaps = 10/380 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F
Sbjct: 4   PPPLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I   L   A    ++ + EIT+E NP + E   F  Y  AG+NR+S 
Sbjct: 64  LGGGTPSLFPPEAIDRFLQIAAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSF 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA
Sbjct: 124 GIQSFNDAALRRLGRIHDSLQAEHAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + A  HLS YQLT+E  T+FY         +P ++ A ++   TQ + +  G   YE+S
Sbjct: 184 FALAPTHLSYYQLTLEPNTVFYARPPQ---GIPDDDAAWEMQEHTQRLLAEAGYQHYEVS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNG 312
            ++  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L       
Sbjct: 241 AYAREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDN-AGTV 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
            A+   E + + +   E+++  LRLREG  ++D+ +  G  ++      R    +G++ R
Sbjct: 300 SAIGGDEIVPTARLPFEYMLNLLRLREGFRLQDFALRTGLTVESIHAALREAVARGWL-R 358

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            +   +  T+ G+   + VI
Sbjct: 359 CELEHVIPTELGLRFANDVI 378


>gi|283788523|ref|YP_003368388.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           rodentium ICC168]
 gi|282951977|emb|CBG91704.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citrobacter rodentium ICC168]
          Length = 378

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 128/382 (33%), Positives = 212/382 (55%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLAADVSFAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+    T++++ EIT+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLTLAADAEITMEANPGTVEADRFVDYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP+QT+ +   +L++A++
Sbjct: 126 QSFSEAKLKRLGRIHGPEEARRAARLASGLGLRSFNLDLMHGLPEQTLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         +LP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----LLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFPDGRILRTTKTRHPRGYMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             +  ++   +  EF M   RL E    +++    G +     ++  +   QG++   + 
Sbjct: 297 ESQRDVAQADKPFEFFMNRFRLLEAAPRREFSDYTGLSETAIRQQIDDAIAQGYLTESE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+ ++    V
Sbjct: 356 ECWQITRHGKLFLNWLLELFLV 377


>gi|157162416|ref|YP_001459734.1| coproporphyrinogen III oxidase [Escherichia coli HS]
 gi|170018804|ref|YP_001723758.1| coproporphyrinogen III oxidase [Escherichia coli ATCC 8739]
 gi|254038005|ref|ZP_04872063.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|300906481|ref|ZP_07124176.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 84-1]
 gi|301306564|ref|ZP_07212626.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 124-1]
 gi|301328109|ref|ZP_07221250.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 78-1]
 gi|312972803|ref|ZP_07786976.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1827-70]
 gi|157068096|gb|ABV07351.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli HS]
 gi|169753732|gb|ACA76431.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ATCC 8739]
 gi|226839629|gb|EEH71650.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|300401724|gb|EFJ85262.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 84-1]
 gi|300838182|gb|EFK65942.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 124-1]
 gi|300845413|gb|EFK73173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 78-1]
 gi|310332745|gb|EFP99958.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1827-70]
 gi|315256847|gb|EFU36815.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 85-1]
 gi|320202619|gb|EFW77189.1| coproporphyrinogen III oxidase [Escherichia coli EC4100B]
 gi|323941959|gb|EGB38138.1| radical SAM superfamily protein [Escherichia coli E482]
 gi|332344855|gb|AEE58189.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Escherichia coli UMNK88]
          Length = 378

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|301631758|ref|XP_002944962.1| PREDICTED: oxygen-independent coproporphyrinogen-III oxidase-like
           protein HI_0463-like [Xenopus (Silurana) tropicalis]
          Length = 398

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 131/375 (34%), Positives = 208/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH P+C++KCPYCDFNSH  +   + ++ +I + + +++    L   R++ SIF 
Sbjct: 23  PLSLYVHLPWCLRKCPYCDFNSHAMQAGTLPEQRYIDALVADLEAALPLVWGRTVHSIFI 82

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P +I  +L  +     + ++ E T+EANP + E   F+ +R AGV R+S+G
Sbjct: 83  GGGTPSLFSPDSIDRLLSDLRARLRIEADCETTLEANPGTFEKERFRAFRAAGVTRLSIG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS ++  L+ LGR HN ++A+AA+  A   F   + D++YALP Q+M   E +L+ AL+
Sbjct: 143 VQSFDDGHLQALGRVHNRAQALAAVQEAAQAFETFTLDIMYALPGQSMADLERDLETALA 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLS+Y LTIE  T F K        LP  + A  + +    +T A GL  YE+S +
Sbjct: 203 FAPPHLSVYHLTIEPNTWFAKHPP----ALPEGDEAYAMLDRITEMTGAAGLTRYEVSAY 258

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G + +HN NYW++GDY+GIG GAHS++      V     + P  ++        AV 
Sbjct: 259 ARKGHQCVHNGNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRYREPRRYMDKALAGC-AVA 317

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
           + E +       E+++  LRLR+G +++ +    G  +          +R+G I R    
Sbjct: 318 QDEDVRRADLPFEYMLNALRLRQGFALQHFCERTGLPVTAIARGLEQAERKGLIVR-DMG 376

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+RG   L  +
Sbjct: 377 HVRPTERGFDFLSDL 391


>gi|116054116|ref|YP_788559.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115589337|gb|ABJ15352.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 384

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 210/381 (55%), Gaps = 12/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFG
Sbjct: 11  PLALYVHIPWCVRKCPYCDFNSHAAGTELPEEAYVDALLADLEQDLRHVHGRRLGSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + +  +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GV
Sbjct: 71  GGTPSLFSAKALGRLLEGVERRVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+
Sbjct: 131 QSFQADKLQALGRIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+         LP +++  D+    Q++  AHG   YE S +
Sbjct: 191 LAPTHLSWYQLTMEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDAHGYRQYETSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +     + HNLNYW +GD++GIG GAH+++     R+  + + + P+ +L   +      
Sbjct: 247 ARDDLRARHNLNYWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
             +  L +     EF+M  LRL +G+    +    G+ L    +     +  G +     
Sbjct: 304 AGERPLEAADLPFEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDP 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RLR ++RG   L+ ++ +  
Sbjct: 363 QRLRPSERGQLFLNDLLQHFL 383


>gi|227833636|ref|YP_002835343.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454652|gb|ACP33405.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 382

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 120/382 (31%), Positives = 181/382 (47%), Gaps = 14/382 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  G+Y+H PFC  +C YCDFN++      G    +++ +   E++    +   R   ++
Sbjct: 2   DPFGLYIHVPFCASRCGYCDFNTYTPGELGGDLTSDYLVALEKELEM-AAVQVDREAETV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+  + +  +L  +   + ++   E+T E+NP S     F G   AG  R+S
Sbjct: 61  FIGGGTPSLLGAEGLGRVLSKVRDTFGLAPGAEVTTESNPESTSPEYFAGLLDAGFTRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS     L  L R H    A  A   A    F  ++ D+IY  P +      + L+R
Sbjct: 121 LGMQSASPGVLAVLERAHTPGRAFDAAREAIAAGFEHVNLDMIYGTPTEEDADVALTLER 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   A G   YE+
Sbjct: 181 ALETGVDHISAYSLIVEDGTRMARKVSKGLLPAPDEDVLARRYEMISSTLEAEGFEWYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN  YW  G++ G GPGAHS +            K+P +++K V +   
Sbjct: 241 SNWAKPGGECQHNRIYWVDGNWWGAGPGAHSHLGNERFYNV----KNPRTYIKAVGEGEL 296

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            + E+E L+   +  E +M+GLRLREG+                       +G +ER   
Sbjct: 297 PIKEREQLTEADRHTERIMLGLRLREGMPASWLA-----PAAEPVAARSIERGLLERA-G 350

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RLR T+ G  + D +I +L V
Sbjct: 351 DRLRVTKAGRLLADGIITDLLV 372


>gi|114762201|ref|ZP_01441669.1| coproporphyrinogen III oxidase [Pelagibaca bermudensis HTCC2601]
 gi|114545225|gb|EAU48228.1| coproporphyrinogen III oxidase [Roseovarius sp. HTCC2601]
          Length = 383

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 175/380 (46%), Positives = 235/380 (61%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+YVHWPFC  KCPYCDFNSHV    V Q  +  + ++E+    + T  R + SI+
Sbjct: 7   DGGFGLYVHWPFCEAKCPYCDFNSHVVS-HVDQTRWAAALVSELARYGRQTEGRVLRSIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P+ +  +LD    +W  ++++EIT+EANP SVE+N F+G+  AGVNR+SL
Sbjct: 66  FGGGTPSLMAPETVRAVLDASRDHWAWANDIEITLEANPRSVEINKFEGFAMAGVNRVSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L    LR LGR H+  +A+ A+ +A++ F R++FDLIY    Q+++ WE+EL+ AL
Sbjct: 126 GVQALRPDDLRRLGRLHDVDDAVRALEIAKSTFNRVNFDLIYGRQGQSLSDWEVELREAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A DHLSLYQLTIE+GT F+   + G L  LPSE++  DLY  TQ I  A G  AYE+S
Sbjct: 186 DLAADHLSLYQLTIEEGTAFWDRAQAGKLRDLPSEDLGADLYLATQEICEAAGKPAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NHS  G ES HNL YWR GDY+GIGPGAH RV V   R A    + P  W+K     G A
Sbjct: 246 NHSGEGDESRHNLVYWRGGDYVGIGPGAHGRVTVNGQRSATVARRAPGDWIKAAEA-GSA 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
             E E L  +    E+LMMGLRL EG+ ++   M+  +         L   G I R +  
Sbjct: 305 DQEVESLMLQDVWAEYLMMGLRLSEGLDLERARMIDPKRTAALSLDPLVELGLIWRNEA- 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R   TQ+G  +L+++ A L 
Sbjct: 364 RFGATQQGRMLLNTLTAELL 383


>gi|55823155|ref|YP_141596.1| coproporphyrinogen III oxidase [Streptococcus thermophilus
           CNRZ1066]
 gi|55739140|gb|AAV62781.1| coproporphyrinogen III oxidase [Streptococcus thermophilus
           CNRZ1066]
          Length = 378

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 211/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +    L+  + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIHEWE----LSDIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +  + LQ  G + + 
Sbjct: 294 RLNEEHLTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFSDTYGDIVKKLQEDGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|228910154|ref|ZP_04073973.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 200]
 gi|228849437|gb|EEM94272.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 200]
          Length = 381

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 115/382 (30%), Positives = 182/382 (47%), Gaps = 11/382 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LPSE+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPSEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   + 
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLN 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ-F 373
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESDGG 358

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V  +  +
Sbjct: 359 GYVRLTRKGKLLGNEVFQSFLI 380


>gi|307288258|ref|ZP_07568256.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0109]
 gi|306500774|gb|EFM70094.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0109]
 gi|315164176|gb|EFU08193.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX1302]
          Length = 382

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDTLTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMDKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQHKFQEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|256019243|ref|ZP_05433108.1| coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|332280351|ref|ZP_08392764.1| coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|332102703|gb|EGJ06049.1| coproporphyrinogen III oxidase [Shigella sp. D9]
          Length = 378

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 205/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|229163262|ref|ZP_04291217.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus R309803]
 gi|228620325|gb|EEK77196.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus R309803]
          Length = 378

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEQEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 298 VHAVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNVEMDQVFSKQLQSNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|294012807|ref|YP_003546267.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
 gi|292676137|dbj|BAI97655.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
          Length = 391

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 174/388 (44%), Positives = 241/388 (62%), Gaps = 10/388 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
                  L +YVHWPFCV KCPYCDFNSHV R ++  + +  + L+++     L+G R +
Sbjct: 9   AAAPDEPLALYVHWPFCVSKCPYCDFNSHV-RAEIDNDAWRAALLSDLAHEAALSGGRPL 67

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           SSIFFGGGTPSL+ P  +  ++D   + W  ++++EIT+EANPSSVE   F     AGVN
Sbjct: 68  SSIFFGGGTPSLMPPDIVEALIDAATRRWRPTNDIEITLEANPSSVEAARFADLAAAGVN 127

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+Q+LE+++L FLGR H+  E +AA+ +A++ F R++FDLIYA P Q++T WE EL
Sbjct: 128 RVSLGLQALEDEALHFLGRAHDVREGLAALDVAQSAFGRVNFDLIYARPDQSLTDWESEL 187

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            R LS+   HLSLYQLTIE GT F  +   G L     + A DLY  TQ++T+A GL AY
Sbjct: 188 ARGLSFGTGHLSLYQLTIEPGTRFATLAAQGRLKPADPDHAADLYEATQAMTAAAGLPAY 247

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISNH+  G ES HNL YWRYGDY+G+GPGAH R       +A    + PE+W+  V +N
Sbjct: 248 EISNHARPGQESRHNLTYWRYGDYVGVGPGAHGR----RDGLATLRHRKPENWMNAVARN 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGF 367
           GH +  +E L    +A E L+MGLRL EG+ ++    L+       +D E    L   G 
Sbjct: 304 GHGLQGEEPLDGRDRAREALLMGLRLAEGVELERIARLSSLPVEDLVDAEAVARLAGHGL 363

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           + R +   L     GM +LD+++  +  
Sbjct: 364 V-RQEGRGLCVEPAGMLLLDAILPEIVA 390


>gi|228948030|ref|ZP_04110315.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228811616|gb|EEM57952.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 378

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AVYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|229174992|ref|ZP_04302511.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus MM3]
 gi|228608453|gb|EEK65756.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus MM3]
          Length = 379

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYSQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      ++    + LQ+   QG +E     
Sbjct: 299 VHAVTEKERMEEELFLGLRKTQGVSKILFQKKFNMEMNQVFAKQLQKNQEQGLLEEKD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|15803494|ref|NP_289527.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933]
 gi|12517501|gb|AAG58086.1|AE005525_12 putative oxidase [Escherichia coli O157:H7 str. EDL933]
          Length = 378

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLXLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGSAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEPAPRVEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|149909461|ref|ZP_01898116.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
 gi|149807571|gb|EDM67520.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
          Length = 395

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 142/383 (37%), Positives = 209/383 (54%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH ++ K+ ++ +I   L +++        RS+ SIF G
Sbjct: 22  PLSLYVHIPWCVQKCPYCDFNSHTQKGKIPEDEYIADLLADLRSELPRVFQRSLHSIFIG 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSLI  + I  ILDGI      S N+EIT+EANP +VE N F GY  AGVNRIS+GV
Sbjct: 82  GGTPSLISAEGIGKILDGIEAMIPFSDNIEITMEANPGTVEANRFHGYVAAGVNRISIGV 141

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL+ + L  LGR H+  EAI A ++A        + DL++ LP Q +     +L +A+ 
Sbjct: 142 QSLQAEKLNLLGRIHDPDEAIRAANIASESALNSFNLDLMHGLPHQDLNDALYDLNKAVE 201

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE+ T F+         LP E++  D++    ++ S  G   YEIS +
Sbjct: 202 LAPQHLSWYQLTIEQNTQFHSKPP----TLPDEDILWDIFEQGHALLSEAGYEQYEISGY 257

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDYIGIG GAH ++           S  KHP  ++     +   
Sbjct: 258 AKAGNQCQHNLNYWRFGDYIGIGCGAHGKLTDPETGKIYRRSKVKHPRGYMDA---DKAF 314

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQ 372
           +  +  +  ++   EF M   RL E    +D+    G  L    ++     ++G +   +
Sbjct: 315 LDNEHVVVQDELPFEFFMNRFRLTEATPKQDFCDFTGLPLTTVSKQIDAAIKKGLLTETE 374

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +  + T+ G   L+S+  +L +
Sbjct: 375 -THWQVTKLGHRYLNSLF-DLFI 395


>gi|258544888|ref|ZP_05705122.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
 gi|258519808|gb|EEV88667.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
          Length = 376

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 143/379 (37%), Positives = 203/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H P+CV+KCPYCDFNSH  R  + +  +++  L ++        PR I SIF GGG
Sbjct: 6   SLYIHIPWCVRKCPYCDFNSHALRGAIDEAGYVRHLLADL---AHDLDPRPIESIFIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL     IA +LDGI +   +    EIT+EANP + E   F  YR AGVNR+S+GVQS
Sbjct: 63  TPSLFSAAAIAALLDGINRQSPLPDTCEITLEANPGTFEQAKFADYRAAGVNRLSIGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L  LGR HN  EAI A+ +A    F R++ DL++ALP Q +     +L++A + A
Sbjct: 123 FDAAQLHALGRIHNRDEAIRAVAIAEKAGFQRINLDLMFALPGQDVAGALADLRQATALA 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S YQLT+E  T FY         LP  +  +D+Y    +  SAHG   YE S    
Sbjct: 183 PEHISWYQLTLEPNTAFYANPP----ALPDSDTQIDIYEAGSAHLSAHGYRQYETSAW-R 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA   HNLNYW+YGDY+GIG GAH +          S  + P ++ K      +   ++
Sbjct: 238 AGAPCRHNLNYWQYGDYLGIGAGAHGKQTRDGVISRSSKYRAPGAYQKAAGNGENPYRDQ 297

Query: 319 EF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSR 375
            F +  ++Q  E +M  LRL++GI        +   LD        L  QG I+     R
Sbjct: 298 RFTVPRDEQPFEIMMNALRLKDGIPTAYLHERSALTLDDLRPTLARLIAQGLIDPAIEQR 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T+RG  +L++V+    
Sbjct: 358 LKTTERGFALLNNVLDAFL 376


>gi|308188047|ref|YP_003932178.1| oxidase [Pantoea vagans C9-1]
 gi|308058557|gb|ADO10729.1| putative oxidase [Pantoea vagans C9-1]
          Length = 379

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V    ++Q  L +++    L   R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKDEVPHVEYVQHLLRDLEIDLPLINGREVRTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + +++DG+    T++ + E+T+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSSAMQMLMDGVRARLTLAPDAEVTMEANPGTVEADRFSAYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   Q L+ LGR H   EA+ A  LA ++  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPQKLQRLGRIHGPEEAVRAAELAESLSLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGDRLLQAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++     R+  +++ +HP  +++     G+  
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGRIVRTVKTRHPRGFMQ-----GNYR 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            ++  +    +  E+ M   RL E     ++    G +  +           G++     
Sbjct: 297 EKQYEVVDSDKPFEYFMNRFRLLEAAPRDEFSRYTGLSEQVIRPQMDAAIAAGYVTETAE 356

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T++G   L+S++  L +
Sbjct: 357 Q-WQITEKGKLFLNSLL-ELFL 376


>gi|83648998|ref|YP_437433.1| coproporphyrinogen III oxidase-like protein [Hahella chejuensis
           KCTC 2396]
 gi|83637041|gb|ABC33008.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Hahella chejuensis KCTC 2396]
          Length = 388

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 140/391 (35%), Positives = 217/391 (55%), Gaps = 18/391 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTG 67
            G  +  L +YVH P+CV+KCPYCDFNSH  R ++ +  ++Q+ L+++      + Q+ G
Sbjct: 7   PGLHTPPLALYVHIPWCVRKCPYCDFNSHTARSELPEREYLQALLSDLDTEMFRLEQIGG 66

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R++ SIFFGGGTPSL+ P  IA ++DG  +      ++EIT+EANP +V+   F+   +
Sbjct: 67  KRALGSIFFGGGTPSLLSPDIIASVIDGARQRLGFHDDIEITLEANPGTVDEAKFKDLFQ 126

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNR+SLGVQS + + L  LGR HN  +AI A+  AR   F   + DL++ LP Q++  
Sbjct: 127 GGVNRLSLGVQSFQPELLTTLGRIHNGEDAIRAVDKARQAGFDNFNLDLMHGLPGQSLQH 186

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +L  A+S    HLS YQLTIE  T FY+        LP ++   +++       +  
Sbjct: 187 AMEDLDTAISLGPTHLSWYQLTIEPNTEFYRHPP----QLPEDDTLWEIHENGCERLAQA 242

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWL 305
           G + YEIS  +  G ES HNLNYWR+GDY+ IG GAH ++   S   +     + P+ +L
Sbjct: 243 GYNQYEISAFAQTGKESRHNLNYWRFGDYLAIGAGAHGKLTGSSGDVIRYWKTRLPQHYL 302

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA--GRNLDIECERNLQ 363
             +    +    +E   + +   +FLM  LRLREG+  +        G +L        +
Sbjct: 303 SRID---NYTAGEEITPAHEAGVDFLMNALRLREGVEEELLVRRTGVGVSLLEPQLSEAR 359

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++G++   Q  RL+CT+ G   L++V+ +  
Sbjct: 360 QKGWL---QADRLQCTELGYRHLNAVLTHFM 387


>gi|55821243|ref|YP_139685.1| coproporphyrinogen III oxidase [Streptococcus thermophilus LMG
           18311]
 gi|55737228|gb|AAV60870.1| coproporphyrinogen III oxidase [Streptococcus thermophilus LMG
           18311]
          Length = 378

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 210/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +    L+  + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIREWE----LSDIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + + 
Sbjct: 294 RLNEEHLTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGMSFSDTYGDIVEKLQADGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|322372731|ref|ZP_08047267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C150]
 gi|321277773|gb|EFX54842.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C150]
          Length = 378

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 123/384 (32%), Positives = 209/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +    L   + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIREWE----LLDIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I  L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESIDSLKAAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 IELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + + 
Sbjct: 294 RLHEEHLTKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVEKLQADGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + D+V     +
Sbjct: 353 DPDVIRMTKRGLFLGDNVAEQFIL 376


>gi|152976747|ref|YP_001376264.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152025499|gb|ABS23269.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cytotoxicus NVH 391-98]
          Length = 378

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 177/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q    + + +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIVNTVQKAPFKQMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMKQTKKLLDIINRRLRPFAPNCEVTFEANPGDLPKEKLNLLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L+ +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLKKIGRKHTREDAFVAIREAQEVGFTNINIDLIYALPGQTIEDVKETLNIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E     +Y +       HG H YEISN +
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEAKMYEMVMDEMEKHGYHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAHS +     +         + +   + + G   ++
Sbjct: 242 KEGHESRHNLTYWNNEAYYGFGAGAHSYINGERIQNVGP----LKQYFAKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+  K ++   G  ++      L      G +E     
Sbjct: 298 VHQVTEKERMEEELFLGLRKTKGVLKKAFQQKFGVKMEDVFANQLAHNKAHGLLEEKD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T+ G  + + V  +  V
Sbjct: 357 HVCLTRTGKLLGNEVFQSFLV 377


>gi|229111790|ref|ZP_04241337.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-15]
 gi|229148164|ref|ZP_04276470.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST24]
 gi|228635304|gb|EEK91828.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST24]
 gi|228671664|gb|EEL26961.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-15]
          Length = 379

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKNLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFHNKFNIEMDQVFAKQLQSNQEQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|197284233|ref|YP_002150105.1| coproporphyrinogen III oxidase [Proteus mirabilis HI4320]
 gi|227357864|ref|ZP_03842212.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
 gi|194681720|emb|CAR40866.1| putative oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis HI4320]
 gi|227161974|gb|EEI46992.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 216/382 (56%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++       G R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHTLKGEVPHQEYVQHLLNDLDADLTHVGSREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +++A +L G+ +   V+ + EIT+EANP +VE   F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLSAESMADLLYGVKERIAVAPDAEITMEANPGTVEAERFAGFQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+A EA  A  LA+ +  R  + DL++ LP Q+++Q   +LQ+A++
Sbjct: 126 QSFGNDKLIRLGRIHDADEAKNAARLAKELGLRSFNLDLMHGLPDQSLSQALSDLQQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F          LP +++  D+++    + +A G   YE S +
Sbjct: 186 LSPPHLSWYQLTIEPNTQFGSRPP----KLPDDDMLWDIFSEGDKLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
              G +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP+ ++      G  +
Sbjct: 242 CKPGFQCQHNLNYWRFGDYLGIGCGAHGKISFADGRIMRTVKTKHPKGFMA-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
            ++ ++ ++ +  EF M   RL E    +D+    G   +    +       G+I   + 
Sbjct: 297 HQQNWVDNDDRPFEFFMNRFRLLEAFPRQDFSDYTGLAQETIRRQIDEALALGYISETE- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +  + T  G   L+S++  L +
Sbjct: 356 THWQITPHGKLFLNSLL-ELFL 376


>gi|257089709|ref|ZP_05584070.1| coproporphyrinogen III oxidase [Enterococcus faecalis CH188]
 gi|256998521|gb|EEU85041.1| coproporphyrinogen III oxidase [Enterococcus faecalis CH188]
 gi|315578402|gb|EFU90593.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0630]
          Length = 382

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 197/380 (51%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+  +   L RAL+  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLESFRDALTRALALD 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G L LP E +   +++ T       G H YE+SN + 
Sbjct: 184 LPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFAL 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +LK +R+N   +VE 
Sbjct: 244 TGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVET 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L+   Q +E L +GLR + GIS + ++      ++    E  + L ++  +   +   
Sbjct: 300 EELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADI 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+ + ++V     +
Sbjct: 359 LRLTKKGLFVGNNVFEAFLL 378


>gi|229013537|ref|ZP_04170671.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides DSM 2048]
 gi|228747774|gb|EEL97643.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides DSM 2048]
          Length = 379

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 116/381 (30%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++Q    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLQYLEKEIINTVQKVPFESMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   + L  +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 123 TFRNELLEKIGRRHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFTKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E     
Sbjct: 299 VHPVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLENRD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T++G  + + V  +  +
Sbjct: 358 HVCLTRKGKLLGNEVFQSFLI 378


>gi|194017672|ref|ZP_03056282.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus pumilus ATCC 7061]
 gi|194010572|gb|EDW20144.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus pumilus ATCC 7061]
          Length = 379

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 188/380 (49%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   + ++ +   EMQ   +  G + + +IF GGG
Sbjct: 3   AAYIHIPFCEHICHYCDFNKFFIKTQ-PVDEYLAALEKEMQHTIEQKGEQELKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  ++  I +    S N VE  +EANP  + +      ++AGVNR+S GVQ
Sbjct: 62  TPTSLTVSQLDQLMTSIHRVLKPSKNLVEFAVEANPDELSLEKLHVLKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L+ +GR H   + + +   AR   F  +S DL++ LP Q        L+ A S 
Sbjct: 122 TFEDDLLKKIGRVHQKKDVLTSFERARAVGFDNISLDLMFGLPHQEKHHVMNSLETAFSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y L       HGLH YEISN++
Sbjct: 182 GAEHYSVYSLIVEPKTVFYNLMQKGKLHLPPQEREAEMYELVMDEMERHGLHQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  V    +  A  +    + +L+++ + G    E
Sbjct: 242 KPGFESQHNLTYWSNEDYFGFGAGAHGYVDGIRNVNAGPV----KHYLELIEQTGFPYKE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
              ++  +Q +E + +GLR  EG+   D++   G +   L       L+ +G I +    
Sbjct: 298 THQVTKAEQIEEEMFLGLRKIEGVKSADFQAKYGASPEALFPSVLEELEEKGLIVKDDIG 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R T++G  + + V     
Sbjct: 358 -IRLTRKGKLLGNEVFQAFL 376


>gi|228923070|ref|ZP_04086362.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228836568|gb|EEM81917.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 379

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A   
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFML 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + +     ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETRFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + L   Q QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTSFRNKFNVEMDQVFAKQLQSNQEQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|26249376|ref|NP_755416.1| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|300980107|ref|ZP_07174850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 45-1]
 gi|301049250|ref|ZP_07196223.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 185-1]
 gi|26109784|gb|AAN81989.1|AE016766_77 Hypothetical protein yggW [Escherichia coli CFT073]
 gi|300298946|gb|EFJ55331.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 185-1]
 gi|300409364|gb|EFJ92902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 45-1]
 gi|315293931|gb|EFU53283.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 153-1]
          Length = 378

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLNNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDGI     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGIRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A +LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAANLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFLDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|261405583|ref|YP_003241824.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. Y412MC10]
 gi|261282046|gb|ACX64017.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. Y412MC10]
          Length = 388

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 122/389 (31%), Positives = 200/389 (51%), Gaps = 12/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT     +  VY+H PFC  KC YCDFNS+V + +   + ++++   EM+   Q   P  
Sbjct: 1   MTANDQRTEAVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLRALDKEMELTVQANPPGR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAG 129
           I SIF GGGTP++++P  +   L  + +++   S ++E ++EANP + ++      R+ G
Sbjct: 60  IKSIFVGGGTPTVLKPNEMEYFLQSVKRHFPEWSDSIEFSMEANPGTTDLEKLSVMRQGG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNRIS GVQ+ +   L  +GR H+  +   ++  AR   F  MS DL++ LP QT+    
Sbjct: 120 VNRISFGVQAFQNTLLTGIGRIHDTDDVYRSLDNARRAGFDNMSIDLMFGLPNQTLDMLA 179

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             + +AL   + H S+Y L +E+ TLF+ M++   L LP E   +++Y L      A G 
Sbjct: 180 ESVDKALELELPHYSIYSLKVEENTLFHTMYQRNQLPLPDEEDELNMYLLLMERMKAAGY 239

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G ES HN+ YWR  DY G+G GAH  V    H     +  + E+     
Sbjct: 240 KQYEISNFAKPGFESRHNMTYWRNEDYYGLGAGAHGYVGRQRHVNIKGVNPYNEA----- 294

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--- 365
              G   +E   +S E+  ++FLM+GLR+ +G+S   +    G +++      L +    
Sbjct: 295 ANKGLPRLESFEISKEEAMEDFLMVGLRVLDGVSRSRFREQFGISMEDVFAGPLNKMVGA 354

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G ++  +    + + +G+   + V     
Sbjct: 355 GLLDATEEGY-KLSSKGILFGNDVFGEFI 382


>gi|327440964|dbj|BAK17329.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046]
          Length = 381

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 12/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFG 77
           GVY+H PFC + C YCDFN    + +   + +I++   EM+           +I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKVFFKNQ-PVDEYIEALGREMEMTVAQMPEAFTNIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  Q I  +L  I K+  +SS  E + EANP  + ++  Q     GVNR+S+GV
Sbjct: 63  GGTPTALSAQQIEKLLGLITKHIPMSSVKEFSSEANPDELTIDKLQALYNGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  +GR H+       I  A+N  F  +S DL+Y LP QTM QW+  L++AL+
Sbjct: 123 QSFDQSLLEKIGRTHSNEHVYETIQNAKNVGFENISIDLMYGLPGQTMEQWQETLEKALA 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L LP+E++  D+Y++      AHGL  YEISN 
Sbjct: 183 LKLPHYSAYSLIVEPKTIFYIQYAKGKLHLPTEDLETDMYSVLMDTMEAHGLKQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YW   +Y G G GAH  ++   +     I+K    +++ V      ++
Sbjct: 243 ANEGYESTHNKIYWDNDEYAGFGAGAHGYLEGIRYSNVAPIKK----YIETVMAGERPLL 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQF 373
            +  ++++++ +E + +GLR   G++ +++E   G+    +  E    LQ++  IE    
Sbjct: 299 HEHEVTADEKLEEQMFLGLRKSAGVTHEEFETKFGQPMLSIYKEIIDQLQQEQLIELDSE 358

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V     V
Sbjct: 359 G-IRLTRKGRFIGNEVFQRFLV 379


>gi|109899593|ref|YP_662848.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas atlantica T6c]
 gi|109701874|gb|ABG41794.1| coproporphyrinogen III oxidase, anaerobic [Pseudoalteromonas
           atlantica T6c]
          Length = 396

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 134/386 (34%), Positives = 212/386 (54%), Gaps = 17/386 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            + +Y+H P+CV+KCPYCDFNSH ++   + +  ++   L ++     L G R + SIF 
Sbjct: 19  PVALYIHIPWCVQKCPYCDFNSHGQKQDSLPEAEYVSHLLDDLAQDANLIGDRPVHSIFI 78

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P  I  +L G+ +   ++ + EIT+EANP +VE   F G+ +AGVNRIS+G
Sbjct: 79  GGGTPSLFSPDAIGRLLTGVRERVNLAVDAEITLEANPGTVESERFNGFAQAGVNRISIG 138

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +++ L  LGR H+  +A+ A   ARN      + DL++ LP+Q++     +L++ +
Sbjct: 139 VQSFQQEKLERLGRIHDEQQALNAAGYARNAGLNSFNLDLMHGLPEQSIDDALFDLRQGI 198

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    HLS YQLTIE  T F+         LP +++  D+      I +A G   YEIS 
Sbjct: 199 AQQPPHLSWYQLTIEPNTQFHSKPP----TLPEDDILWDIQEQGHDILTAAGYEQYEISG 254

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIE-KHPESWLKMVRKNGH 313
           +S  G +  HNLNYWR+GDY+GIG GAH ++ +  S ++  +++ KHP+ ++ + R   H
Sbjct: 255 YSLAGQQCQHNLNYWRFGDYLGIGCGAHGKITLKDSGQILRTVKVKHPKGYMDLTRSYMH 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECERNLQRQGFI 368
              ++  +  E+   EF M  LRL E    +D+    G   D      E   +   +G +
Sbjct: 315 ---QQHTVQDEELPFEFFMNRLRLLEPCPKQDFSAFTGLVFDEQTDLKENLASAVNKGLL 371

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
                +  + T  G   L+S++  L 
Sbjct: 372 AESD-THWQVTPLGRRYLNSLLEMLV 396


>gi|160897476|ref|YP_001563058.1| oxygen-independent coproporphyrinogen III oxidase [Delftia
           acidovorans SPH-1]
 gi|160363060|gb|ABX34673.1| oxygen-independent coproporphyrinogen III oxidase [Delftia
           acidovorans SPH-1]
          Length = 414

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 212/383 (55%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +YVH P+C++KCPYCDFNSH       ++ ++ +I + + +++    L   R++ SI
Sbjct: 37  PLSLYVHLPWCIRKCPYCDFNSHEHGRDGPELPEDRYIDALVADLESALPLIWGRTVHSI 96

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL  P++I  +L  I     + ++ EIT+EANP + E + F+ +R AGV R+S
Sbjct: 97  FIGGGTPSLFAPESIDRLLAAIRARLRMEADCEITMEANPGTFETDRFRAFRAAGVTRLS 156

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQS +++ L+ +GR H+ ++A AA+  A + F   + DL+YALP QT      +L  A
Sbjct: 157 IGVQSFDDRLLQAVGRVHDGAQARAAVREAADSFETFNIDLMYALPGQTELDLARDLDVA 216

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S+A  HLS+Y LTIE  T F K        +P +++A D+ +   + T+A G+  YEIS
Sbjct: 217 MSFAPPHLSVYHLTIEPNTYFAKFPP----AIPEDDLAYDMLDRITARTAAAGMQRYEIS 272

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            ++  G +  HN NYW++GDY+GIG GAHS++      V     + P  ++         
Sbjct: 273 AYAREGHQCWHNRNYWQFGDYLGIGAGAHSKLSFAHRIVRQVRFRDPARYMDQALAGAPL 332

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQ 372
             + E +       E+++  LRLREG +++D+    G  L          Q +G I R  
Sbjct: 333 AQDGE-VRRADLPFEYMLNALRLREGFALQDFMERTGLPLSSIAKGLDAAQAKGLITR-D 390

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  T+RG   L   +  L +
Sbjct: 391 LGRVVPTERGFDFLSD-LQELFL 412


>gi|229104948|ref|ZP_04235604.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-28]
 gi|228678442|gb|EEL32663.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-28]
          Length = 379

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFTNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFTKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 299 VHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQGNQEQGLLEERD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|251794011|ref|YP_003008743.1| coproporphyrinogen III oxidase [Aggregatibacter aphrophilus NJ8700]
 gi|247535410|gb|ACS98656.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aggregatibacter aphrophilus NJ8700]
          Length = 384

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 209/385 (54%), Gaps = 18/385 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++++  + ++       ++    R + S
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHAQKGAIPEQDYVRHLIADLMADLAHYQESVQQRPLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL     IA +L  I +    + N+EIT+EANP +VE   F GY +AGVNRI
Sbjct: 68  IFIGGGTPSLFSADTIAYLLQQIEQRIPFAPNIEITLEANPGTVEAERFLGYAQAGVNRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  ++ L+ LGR HNA+EA +A+ LA  +     + DL++ LP QT+ +   +L+
Sbjct: 128 SMGIQSFSDEKLQKLGRIHNAAEAKSAVKLASVSPLRSFNLDLMHGLPNQTLNEALDDLR 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+F          LP ++   D++     + +A G   YE
Sbjct: 188 QAIELAPPHLSWYQLTIEPNTMFAYRPP----KLPDDDELWDIFEQGHQLLTAAGYQQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++     
Sbjct: 244 TSAYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLSFQNGNILRYSKTKHPKGYMR----- 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
           G    E+  +S + +  EF M   RL E +   ++E   G  L            Q +I 
Sbjct: 299 GEYRYEEREVSVQDRPFEFFMNRFRLLEAVPKIEFEQFTGLPLSTVSNTMDWALGQKYIV 358

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
               +  + T+ G   L+ ++    
Sbjct: 359 ETDRT-WQITEHGKLFLNELLEQFL 382


>gi|295695857|ref|YP_003589095.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus tusciae
           DSM 2912]
 gi|295411459|gb|ADG05951.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus tusciae
           DSM 2912]
          Length = 387

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 208/380 (54%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC +KC YCDFN++V + +V  E F+Q+ + E++ + +L     + +++ GGG
Sbjct: 8   ALYLHVPFCARKCYYCDFNTYVAKPEVW-ERFVQALVREIRALGRLYPDTVLETVYAGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +    I + +  ++ ++S+ EI++EANP +V+    Q  R+ GVNR+S+G QS
Sbjct: 67  TPSLLSCRQWQQIFEALRGSFHLASDAEISLEANPGTVDCEKLQVLRELGVNRLSIGAQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LR LGR+H     + ++ LAR+     ++ DL++ +P QTM  W   L  A+   
Sbjct: 127 FNRELLRKLGRSHGPEAIVHSVELARSVGGFSLNLDLMFGIPGQTMEDWRQSLAAAVELG 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y L +E+GT + + +  G L LPSE++   +Y          G   YEISN + 
Sbjct: 187 PDHLSAYGLKVEEGTPYSRWYDQGVLDLPSEDLEAKMYTALMEFMDKTGYEQYEISNFAR 246

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA   HNL YW    Y+ +GPGAH  V    + V  ++      ++++  +    V E+
Sbjct: 247 PGARCRHNLVYWNNEPYLAVGPGAHGYVDGVRYVVVRNVP----VYMELAWEGSSTVEER 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             +S E++ ++ +++GLRL EG+    +    GR+L       ++   R G + + + SR
Sbjct: 303 HEVSDEEEMEDTMILGLRLLEGVGDDRFAQRHGRSLFDVFSEPVERYLRSGLLVQ-EGSR 361

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +R  +  + + + V+ +   
Sbjct: 362 VRLAREALWISNEVLQSFLA 381


>gi|329924073|ref|ZP_08279336.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. HGF5]
 gi|328940912|gb|EGG37220.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. HGF5]
          Length = 388

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 122/389 (31%), Positives = 199/389 (51%), Gaps = 12/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT     +  VY+H PFC  KC YCDFNS+V + +   + ++++   EM+   Q   P  
Sbjct: 1   MTANDQRTEAVYIHIPFCTNKCFYCDFNSYVLKDQPVMD-YLRALDKEMELTVQANPPGR 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAG 129
           I SIF GGGTP++++P  +   L  + +++   S ++E ++EANP + ++      R+ G
Sbjct: 60  IKSIFVGGGTPTVLKPNEMEYFLQSVKRHFPEWSDSIEFSMEANPGTTDLEKLSVMRQGG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNRIS GVQ+ +   L  +GR H+  +   ++  AR   F  MS DL++ LP QT+    
Sbjct: 120 VNRISFGVQAFQNTLLTGIGRIHDTDDVYRSLDNARRAGFDNMSIDLMFGLPNQTLDMLA 179

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             + +AL   + H S+Y L +E+ TLF+ M++   L LP E   +++Y L      A G 
Sbjct: 180 ESVDKALELELPHYSIYSLKVEENTLFHTMYQRNQLPLPDEEDELNMYLLLMERMKAAGY 239

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G ES HN+ YWR  DY G+G GAH  V    H     +  + E+     
Sbjct: 240 KQYEISNFAKPGFESRHNMTYWRNEDYYGLGAGAHGYVGRQRHVNIKGVNPYNEA----- 294

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--- 365
              G   +E   +S E+  ++FLM+GLR+ +G+S   +    G  ++      L +    
Sbjct: 295 ANKGLPRLESFEISREEAMEDFLMVGLRVLDGVSRSRFREQFGITMEEVFAGPLNKMVGA 354

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G ++  +    + + +G+   + V     
Sbjct: 355 GLLDATEDGY-KLSSKGILFGNDVFGEFI 382


>gi|116627982|ref|YP_820601.1| coproporphyrinogen III oxidase [Streptococcus thermophilus LMD-9]
 gi|116101259|gb|ABJ66405.1| coproporphyrinogen III oxidase, anaerobic [Streptococcus
           thermophilus LMD-9]
          Length = 378

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 211/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +    L+  + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIREWE----LSDIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSHLQKNLNLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I+ L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESINSLKSAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + + 
Sbjct: 294 RLNEEHLTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGMSFADTYGDIVEKLQADGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|212636428|ref|YP_002312953.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
 gi|212557912|gb|ACJ30366.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
          Length = 378

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 201/382 (52%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q  ++ + + +++        R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQHGELPQTEYVDALIADLKQDLHYVQGRQLHTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  +L  + K      N+EIT+EANP ++E ++F+ Y++AGV R+S+GV
Sbjct: 66  GGTPSLFDAAQIKRLLTEVDKLIKFKDNIEITMEANPGTLEHDDFEAYQRAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+ +EA  A   A+ + +   + DL++ LP Q+  +   +++ A  
Sbjct: 126 QSFSSDKLNLLGRIHDKTEAQVAAKKAKTSGYNSFNLDLMHGLPNQSFDEALADIETAAE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF+         LP +     +Y   Q   +  G   YEIS +
Sbjct: 186 LAPPHLSWYQLTIEPNTLFHSKPP----QLPDDEKLWRIYEQGQKRLAELGYVQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           S  G +  HNLNYW++GDY+GIG GAH ++    H   +     KHP+ +L         
Sbjct: 242 SKEGFQCQHNLNYWQFGDYLGIGCGAHGKITQLKHNKILRTVKIKHPKGYLAASD----Y 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQ 372
             +   +  E +  E+LM  LRL   I  +++E   G  R++  +       +G + + Q
Sbjct: 298 TSDTTIVEEEDRPLEYLMNRLRLMTPIPKEEFEQRTGLERSVISQGIEQACAKGLMTQSQ 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T RG   ++ +++   
Sbjct: 358 -EHWQLTPRGHMFVNDLLSQFL 378


>gi|196039180|ref|ZP_03106486.1| coproporphyrinogen dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196029807|gb|EDX68408.1| coproporphyrinogen dehydrogenase [Bacillus cereus NVH0597-99]
          Length = 378

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      ++    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMNQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|317125272|ref|YP_004099384.1| coproporphyrinogen III oxidase anaerobic [Intrasporangium calvum
           DSM 43043]
 gi|315589360|gb|ADU48657.1| coproporphyrinogen III oxidase, anaerobic [Intrasporangium calvum
           DSM 43043]
          Length = 414

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 24/402 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEM 59
           + + G  +  LG+YVH PFC  +C YCDFN++       ++          +  + L E+
Sbjct: 21  SALAGLATTDLGIYVHVPFCSVRCGYCDFNTYTLTELGPRDGSAAAIGLDTYADAALAEL 80

Query: 60  QWMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
              R++ G     +S++F GGGTP+++   ++  +L GI + + ++   E+T EANP SV
Sbjct: 81  DLARRVLGDAALPVSTVFVGGGTPTMLRSADLVRVLSGIRERFGLTPGAEVTTEANPDSV 140

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
              +       G  R+SLG+QS     L  L R H+      A+   R +  ++S DLIY
Sbjct: 141 TPESLAELAVGGFTRVSLGMQSAVPHVLATLERTHDPDNVARAVEAVRAVGMQVSLDLIY 200

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +++  W   L+ A++   DH+S Y L +E GT      + G + +P ++   D Y 
Sbjct: 201 GTPGESLADWRRSLEAAVAMGPDHVSAYALVVEDGTKLAGQVRRGQVPMPEDDDEADKYE 260

Query: 238 LTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           L   + +  G   YE+SN +   GA   HNL YW   ++ G+GPGAHS V      V   
Sbjct: 261 LADELLTRAGYQWYEVSNWARSDGARCRHNLAYWSGANWWGVGPGAHSHVGG----VRWW 316

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +   G   + +E LS +Q+ DE +++G R+ +G+ +      +GR    
Sbjct: 317 NAKHPAAYAARLVAGGSPALAREILSGDQRYDETVLLGTRIVDGLPLDVLRG-SGR---- 371

Query: 357 ECERNLQRQGFIE---RVQFSRLRCTQRGMTMLDSVIANLAV 395
                L   G ++    V   R+  T+RG  + D+V+  L  
Sbjct: 372 AAVAGLIADGLVDGPAAVGDGRVVLTRRGRLLADTVVHRLIA 413


>gi|312278573|gb|ADQ63230.1| Coproporphyrinogen III oxidase, anaerobic [Streptococcus
           thermophilus ND03]
          Length = 378

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 211/384 (54%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +    L+  + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIREWE----LSDIKELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + KN  +S   E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAEQLDYLLSHLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ LR +GR+HN ++   +I+ L    F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKHLRQIGRSHNQAQIYESINSLKSAGFHNISIDLIYALPGQTMDQVKENVRKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + HLSLY L +E  T+F    + G L LP+E++  ++++        +G   YEIS
Sbjct: 178 LELDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   V    +R    I    + +LK + ++GHA
Sbjct: 238 NFTKPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPI----QHYLKAIAEDGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +  +E   +GLR + G+S+K +E   G +      +    LQ  G + + 
Sbjct: 294 RLNEEHLTKVEMMEEEFFLGLRKKSGVSIKRFEEKFGMSFADTYGDIVEKLQADGLLVK- 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + DSV     +
Sbjct: 353 DPEVVRMTKRGLFLGDSVAEQFIL 376


>gi|229051294|ref|ZP_04194812.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH676]
 gi|228722052|gb|EEL73479.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH676]
          Length = 379

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKNLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       +D    + LQ    QG +E  +  
Sbjct: 299 VHKVTEKERMEEELFLGLRKTKGVSKTAFHNKFNIEMDQVFAKQLQSNQVQGLLEE-EDG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 HVRLTRKGKLLGNEVFQSFLI 378


>gi|229117814|ref|ZP_04247178.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-3]
 gi|228665611|gb|EEL21089.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock1-3]
          Length = 379

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYSQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 299 VHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNIEMDQVFAKQLQGNQEQGLLEERD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|259046703|ref|ZP_05737104.1| coproporphyrinogen dehydrogenase [Granulicatella adiacens ATCC
           49175]
 gi|259036599|gb|EEW37854.1| coproporphyrinogen dehydrogenase [Granulicatella adiacens ATCC
           49175]
          Length = 385

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 194/382 (50%), Gaps = 10/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
               Y+H PFC   C YCDFN  V       + +I+  + EM+   +      + +++ G
Sbjct: 3   PKAAYIHIPFCSHICYYCDFNK-VFIEGQPVDEYIELLIREMELTGKKYKIEPLETLYVG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS + PQ +  +LDGI +   +    E ++E NP           +K GVNR+S+GV
Sbjct: 62  GGTPSSLNPQQMERLLDGIHQYLPLQKGAEFSMELNPDDGTHELLTVMKKGGVNRLSMGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+     L+ +GR H    AI  I  AR   F  MS DLI+ LPKQT+  +E  L+ A+ 
Sbjct: 122 QTFNNDLLKAIGRKHTKETAIRTIENARQVGFENMSIDLIFRLPKQTIADFEESLKMAMD 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S+Y L +E+ T+FY + + G L LP+++   D++ L        G H YEISN+
Sbjct: 182 LDLPHYSIYSLILEQKTVFYNLMRQGKLPLPTQDEEADMFELAMKTMKDFGRHHYEISNY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G ES HNL+YW+  +Y   G GAH  V    ++    I    + +L+ +R+    + 
Sbjct: 242 SIPGYESRHNLHYWKADEYFAFGAGAHGYVNGVRYQNNGPI----QHYLEPLREGKLPIF 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
            +  LS +Q  +EF+ +GLR   G+S K++    G ++D    E  + L  +G +     
Sbjct: 298 SETQLSKKQLIEEFMFLGLRKFSGVSKKEFMERFGNSMDEIYREVIQELIEEGLLTTTSD 357

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +  T RG  + ++V  +  +
Sbjct: 358 GYV-LTHRGKFLGNNVFQSFLI 378


>gi|322383628|ref|ZP_08057379.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321151840|gb|EFX44783.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 383

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 121/388 (31%), Positives = 201/388 (51%), Gaps = 11/388 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M         VY+H PFC  KC YCDFNS V + +    +++ +   EM+       P +
Sbjct: 1   MAQTHPAPKAVYIHIPFCTNKCYYCDFNSFVLKGQ-PVHDYLDAMEREMERTVLEYPPGT 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I ++F GGGTP+++ P  +   L+ +   + +    E ++EANP + ++   Q     GV
Sbjct: 60  IETVFVGGGTPTVLLPDQMERFLEMVHTYFPIDEQTEFSMEANPGTTDLEKLQVMHSGGV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQS     L  +GR HN  +   +I  A    F  +S DL++ LP QT+   E 
Sbjct: 120 NRLSFGVQSFNNGLLTKIGRIHNTDDVYRSIENAHKAGFANISIDLMFGLPDQTVEMMED 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++AL   + H S+Y L +E+ TLF+ ++    L LPSEN  + ++ L     +  G  
Sbjct: 180 TLKKALELHLHHYSIYSLKVEENTLFHTLYHKDQLPLPSENEELAMFQLIMDKLTEEGFI 239

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G ES HN  YW    Y GIG GAH  V    H     ++ + ++      
Sbjct: 240 HYEISNFAKSGYESRHNKMYWHNQSYYGIGAGAHGYVNRMRHINIKGVQPYIDA-----T 294

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQG 366
           ++G  ++ +E +  ++  ++F+M+GLRL EG+S  D+    G +L+    +  R L+++G
Sbjct: 295 RSGRPILSQEIVPEQEAMEDFMMVGLRLLEGVSRDDFYNQFGTDLEGRFGQTIRQLEQKG 354

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +E+ +    R +++G+ + + V A   
Sbjct: 355 LLEQSEKGY-RLSKQGLFLGNEVFAAFI 381


>gi|163942073|ref|YP_001646957.1| coproporphyrinogen III oxidase [Bacillus weihenstephanensis KBAB4]
 gi|229135142|ref|ZP_04263943.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST196]
 gi|163864270|gb|ABY45329.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus weihenstephanensis KBAB4]
 gi|228648319|gb|EEL04353.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BDRD-ST196]
          Length = 379

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++Q    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLQYLEKEIINTVQKVPFESMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ DLIYALP Q++   +  L  A + 
Sbjct: 123 TFRDELLEKIGRRHTREDAFVAIREAQEVGFTNINVDLIYALPGQSIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEIVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFTKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E     
Sbjct: 299 VHPVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLENRD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T++G  + + V  +  +
Sbjct: 358 HVCLTRKGKLLGNEVFQSFLI 378


>gi|218899485|ref|YP_002447896.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           G9842]
 gi|228967386|ref|ZP_04128420.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218542424|gb|ACK94818.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           G9842]
 gi|228792312|gb|EEM39880.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 379

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQRVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|317122992|ref|YP_004102995.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           marianensis DSM 12885]
 gi|315592972|gb|ADU52268.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           marianensis DSM 12885]
          Length = 431

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 203/380 (53%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGG 78
            +YVH P+C ++C YCDFN+++     G+  ++ +   E+  +    G  R + S++ GG
Sbjct: 54  ALYVHVPYCRQRCYYCDFNTYLL-DPEGKARYLAALQRELALLATDPGLTRPLVSVYVGG 112

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++EP  +  +L  + +++ ++ + EIT+E NP +++       R  GV R+SLG+Q
Sbjct: 113 GTPSILEPAELERLLGAVHRHFCLAPDAEITVECNPGTLDEGRLAALRDGGVTRLSLGLQ 172

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++++ LR +GR+H  ++  A     R   F  ++ DLI+ LP QT+ QWE  L+  +  
Sbjct: 173 AVQDELLRAMGRDHTWADFCATYRRVRQAGFDNVNIDLIFGLPGQTLDQWEASLRAVVDL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +  GT F++  + G+LVLP E+    +++L      A G   YEISN +
Sbjct: 233 DPEHVSCYGLELHPGTPFHRWWEAGELVLPGEDAERAMFDLAYERLGAAGFVRYEISNFA 292

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN  YW  G Y+G GPGA S  +    R  +    HP ++   + ++   V  
Sbjct: 293 RPGRESVHNRVYWLNGSYLGAGPGAWSCWRGERRRNRL----HPAAYAAELAEDRLPVDV 348

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           +E +   +  +E +++GLRL EG+    +    G             L  +G++ R +  
Sbjct: 349 REPVDRRRAMEETMILGLRLAEGVDEARFARRFGLTPAEAFPAAVARLLDEGWLVR-EGG 407

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR +   + + +SV+A   
Sbjct: 408 RLRLSPGAVPVANSVLAYFV 427


>gi|315443734|ref|YP_004076613.1| coproporphyrinogen III oxidase anaerobic [Mycobacterium sp. Spyr1]
 gi|315262037|gb|ADT98778.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. Spyr1]
          Length = 398

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 177/389 (45%), Gaps = 16/389 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTG 67
           T       GVY+H PFC  +C YCDFN++            + ++ +   E+Q      G
Sbjct: 19  TAPADRPFGVYIHVPFCATRCGYCDFNTYTPAELGAGGATPDGWLTALRAELQMAAAHLG 78

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P  +S++F GGGTPSL+    +A +LD +  ++T++ + EIT E+NP S     F G R
Sbjct: 79  EPPPVSTVFVGGGTPSLLGAAGLARVLDAVRADFTLTPDAEITTESNPESTSPRFFAGLR 138

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
            AG  R+SLG+QS     LR L R H+   A+ A   AR   F  ++ DLIY  P +T  
Sbjct: 139 AAGYTRVSLGMQSTAPHVLRALDRVHSPGRAVDAAREARAEGFDHVNLDLIYGTPGETDD 198

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                   A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L     + 
Sbjct: 199 DLLRSADAAVEAGVDHVSGYALIVEDGTALARRVRRGEIARPDDDVHARRYELLDRRLTD 258

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN S    E  HNL YW  G + G GPGAH  V            KHP ++ 
Sbjct: 259 AGFTWYEVSNWSRPDGECRHNLGYWDGGQWWGAGPGAHGYVDATR----WWNVKHPNAYA 314

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             +      V + E + +E    E +M+  RLR G+             + E        
Sbjct: 315 ATLETGALPVADLEAIDAETSHVEEVMLKTRLRTGLPAATLSAR-----ERERAAVAVAD 369

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G + R        T RG  + D+V+ +L 
Sbjct: 370 GLL-RADGQSFVLTDRGRLLADAVVRDLL 397


>gi|229198445|ref|ZP_04325149.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1293]
 gi|228584948|gb|EEK43062.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus m1293]
          Length = 378

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLNIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDEIGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|296333292|ref|ZP_06875745.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305675203|ref|YP_003866875.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296149490|gb|EFG90386.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413447|gb|ADM38566.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 379

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 191/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGKPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS + E  +EANP  +        +++GVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMIIRVLKPSSTLSEFAVEANPDDLSAEKLNILKESGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +  A+   AR I F  +S DL++ LP QT+   +  L  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFASFERAREIGFDNISLDLMFGLPGQTLKHVDHSLNTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +      A+G+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEMVMRRMEANGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGLESKHNLTYWSNEEYFGFGAGAHGYISGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDELFPNVLKDLTEKGLIHNSE-S 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T +G  + + V     
Sbjct: 357 AVCLTHQGKLLGNEVFGAFL 376


>gi|49187212|ref|YP_030464.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Sterne]
 gi|49181139|gb|AAT56515.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. Sterne]
          Length = 379

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEESD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|192362341|ref|YP_001980647.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cellvibrio japonicus Ueda107]
 gi|190688506|gb|ACE86184.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cellvibrio japonicus Ueda107]
          Length = 393

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 137/392 (34%), Positives = 209/392 (53%), Gaps = 20/392 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + + ++I +   ++   + L   R I+SIFFG
Sbjct: 7   PLALYIHVPWCIRKCPYCDFNSHQANNDIPEADYIAALRQDLACDQSLAQGRKITSIFFG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q I  IL    +      ++EIT+EANP + E   F G+R AGVNR+S+G+
Sbjct: 67  GGTPSLLSAQAIGQILVDAEQLIGFEPHIEITLEANPGTFEQEKFSGFRAAGVNRLSIGI 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +Q L  LGR H   EA+ A+++AR   F  ++ DL++ LP Q++   + +LQ+A+ 
Sbjct: 127 QSFNDQQLHLLGRVHGRDEALRAVNVARKAGFDNINLDLMHGLPGQSVGDAQADLQQAIE 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HLS YQLTIE+ T FY        VLP E +  D+ +  Q + +A G   YEIS +
Sbjct: 187 LEPEHLSWYQLTIEQNTAFYSAPP----VLPEEEILADIQDAGQLLLAAAGYEHYEISAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV--AISIEKHPESWLKM------- 307
           +     S HNLNYW +GDY+GIG GAH +V +   +    +   + P+ +L         
Sbjct: 243 ARAKQFSRHNLNYWEFGDYLGIGAGAHGKVTLPEQQNILRLWKTRLPKHYLDAATSARIS 302

Query: 308 --VRKNGHAVVEK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNL 362
             ++ + +      + L  E    EF+M  LRL  G+  + +    G +      C   L
Sbjct: 303 TNLQGHQNPFGGGSDLLGEESLPLEFMMNALRLHRGVPEQYFAQRTGLDFSAIASCWDEL 362

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            R+  +E    + LR T  G   L+ V+    
Sbjct: 363 ARKKLVELADGA-LRPTPLGRRFLNRVLQAFM 393


>gi|229098788|ref|ZP_04229726.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-29]
 gi|228684632|gb|EEL38572.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-29]
          Length = 379

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFTNINIDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 299 VHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNIEMDQVFAKQLQGNQEQGLLEERD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|333027163|ref|ZP_08455227.1| putative coproporphyrinogen III oxidase [Streptomyces sp. Tu6071]
 gi|332747015|gb|EGJ77456.1| putative coproporphyrinogen III oxidase [Streptomyces sp. Tu6071]
          Length = 410

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 196/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
              + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++
Sbjct: 19  AQALDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIR 78

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+
Sbjct: 79  LARRVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVD 138

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY
Sbjct: 139 PAYLETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIY 198

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y 
Sbjct: 199 GTPGESDADWRASLEAAVGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYL 258

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +   + +  G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 259 IADELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 314

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E L  E +  E +++ LRL EG  + D  + AGR    
Sbjct: 315 NVKHPGAYAAALAEGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRE--- 370

Query: 357 ECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              R+L   G ++   +       T RG  + D+V+ +L 
Sbjct: 371 AAARHL-GDGLLDPGAYAKGAAVLTLRGRLLADAVVRDLV 409


>gi|251796214|ref|YP_003010945.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. JDR-2]
 gi|247543840|gb|ACT00859.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           sp. JDR-2]
          Length = 392

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 118/385 (30%), Positives = 194/385 (50%), Gaps = 14/385 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
              +Y+H PFC  KC YCDF S+V + +   + ++ +   EM        P  I ++F G
Sbjct: 6   PKALYIHIPFCTNKCHYCDFTSYVLKGQ-PVDEYLDALEREMALTVAQMPPERIDTVFVG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  +   L  + K + ++ +VE T+EANP + +          GVNRIS GV
Sbjct: 65  GGTPTVLTPPQMERFLTSVKKYFPLADDVEFTMEANPGTTDPEKLAAMFAGGVNRISFGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L  +GR HN  +   ++  AR   F  +S DL++ LPKQT+   E  + +AL+
Sbjct: 125 QSFDNGLLERIGRIHNVDDVYRSLENARAAGFTNLSIDLMFGLPKQTVEMLEDSVNKALA 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H SLY L +E+ TLF+K+++  +L LP E+   ++Y L        G   YEISN 
Sbjct: 185 LDLPHYSLYSLKVEENTLFHKLYQRDELPLPPEDEEFNMYTLLMDRLKQAGYVHYEISNF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YWR   Y G+G GAH   +   H     ++   +       K     +
Sbjct: 245 AKPGYESRHNSTYWRNEPYYGLGAGAHGYARGLRHVNVKGVQPFID-----YTKTKLPRL 299

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDIE---CERNLQRQGFIERV- 371
           E+  +   +  ++F+M+GLRL +G+   D+     G+ L+ +       L + G +E+V 
Sbjct: 300 EENVVPEYEAMEDFMMVGLRLLKGVRTSDYAAQFEGQKLEDKFGPIIEKLLKDGLLEKVL 359

Query: 372 -QFSRL-RCTQRGMTMLDSVIANLA 394
            +   + + T +G+   + V  +  
Sbjct: 360 EEGDTIYKLTDKGVLFGNDVFGSFI 384


>gi|228999110|ref|ZP_04158692.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock3-17]
 gi|228760727|gb|EEM09691.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock3-17]
          Length = 378

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 9/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     ++ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFENMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +           GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L+ +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E     +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEARMYEMVMDEMENHGYKQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KEGYESRHNLTYWNNEQYYGFGAGAHSYVNGERIQNVGP----LKQYFSKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQFSR 375
              ++ +++ +E L +GLR  +G+S   ++   G  +D    + L   ++  + + + + 
Sbjct: 298 VHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMDEIFAKQLLSNKEYGLLQDKGNH 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T++G  + + V  +  +
Sbjct: 358 VCLTRQGKLLGNEVFQSFLI 377


>gi|91794038|ref|YP_563689.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella denitrificans OS217]
 gi|91716040|gb|ABE55966.1| coproporphyrinogen III oxidase, anaerobic [Shewanella denitrificans
           OS217]
          Length = 400

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 131/401 (32%), Positives = 208/401 (51%), Gaps = 31/401 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQHGELPQQAYVDALLADLAQDMDYVQGRQLHTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL + + I  +L G+        ++EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 66  GGTPSLFDAKQIERLLLGVQALIPFERDIEITMEANPGTLEHDDFSAYRAAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H+ +EA+ A   A+   +   + DL++ LP Q+ ++   ++  A+S
Sbjct: 126 QSFAKDKLNLLGRIHDQNEAVVAAQKAKEADYLSFNLDLMHGLPNQSFSEAMHDIDTAVS 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 186 LAPPHLSWYQLTIEPNTLFHSKPP----QLPDDEDLWQIYQQGQQKLAALGYEQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMVR----- 309
           +  G +  HNLNYW++GDY+GIG GAH ++     +  +     KHP+ +L         
Sbjct: 242 AKPGFQCRHNLNYWQFGDYLGIGCGAHGKITLMDETSVIRTVKIKHPKGYLASAETALSA 301

Query: 310 -------------KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---N 353
                         N  A      LS E    E+LM  LRL   I   ++E   G+   +
Sbjct: 302 NKSHEASPSTANKANHFAASVTPILS-EDMGLEYLMNRLRLMTPIPKTEFEQRTGQAHSS 360

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           LDI   +  + +G I + + +  + T +G   ++ +++   
Sbjct: 361 LDIGMAKA-ESRGLITQDE-THWQLTSKGHMFVNDILSQFL 399


>gi|229062015|ref|ZP_04199341.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH603]
 gi|228717324|gb|EEL68997.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus AH603]
          Length = 379

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++Q    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLQYLEKEIINTVQKVPFESMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKQLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRRHTREDAFLAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       +G + YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKNGYNQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFTKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S  +++      +D    + L   Q QG +E     
Sbjct: 299 VHAVTEKEKMEEELFLGLRKTKGVSKLEFQKKFNVEMDHVFAKQLQSNQEQGLLENRD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T++G  + + V  +  +
Sbjct: 358 HVCLTRKGKLLGNEVFQSFLI 378


>gi|78484462|ref|YP_390387.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thiomicrospira crunogena XCL-2]
 gi|78362748|gb|ABB40713.1| coproporphyrinogen III oxidase, anaerobic [Thiomicrospira crunogena
           XCL-2]
          Length = 382

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 216/378 (57%), Gaps = 13/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH+P+C++KCPYCDFNSH       ++ +IQ+ + +++        R I SIFFG
Sbjct: 8   PLSLYVHYPWCIQKCPYCDFNSHTLGEDQ-EQRYIQALIRQLEQTLPDIWGRPIQSIFFG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    + + L           ++EIT+EANP +V+   F G+R+AG+NR+S+G+
Sbjct: 67  GGTPSLMSEAGLDMFLSQARALLGFQPDIEITLEANPGTVDFEKFSGFRQAGINRLSMGI 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ LR LGR H++ EA  A+  AR+  F   + DL++ALP QT+ Q   +++ AL+
Sbjct: 127 QSFDDEKLRDLGRIHSSDEAYKAVEAARSAGFDNFNLDLMFALPSQTLKQAIHDVETALA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T FYK       VLP E++A ++    Q++ S  G H YE+S +
Sbjct: 187 LEPTHISHYQLTLEPNTPFYKNPP----VLPEEDLAWEMQLACQTVLSETGYHHYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +       HNLNYW++GDYIG+G GAH ++            +   P  ++ M+      
Sbjct: 243 AKKNQACRHNLNYWQFGDYIGLGAGAHGKITQPPLGEIWRTQMPASPGGYMNMIESGD-- 300

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
           +  +  LS +    EF++  LRL++G  +  + +  G  L +     +++  +G+ E+ Q
Sbjct: 301 MGRRHILSDDDALFEFMLNALRLQDGFPLALFTVRTGLPLQVIDPQLKSMISKGWAEQDQ 360

Query: 373 FSRLRCTQRGMTMLDSVI 390
            + L+ TQ G T L+ V+
Sbjct: 361 DN-LQLTQTGKTYLNEVL 377


>gi|154686810|ref|YP_001421971.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42]
 gi|154352661|gb|ABS74740.1| HemN [Bacillus amyloliquefaciens FZB42]
          Length = 379

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 189/380 (49%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ S   EM    + TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNSLEKEMINTIERTGRPDLRTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ + P  +  ++D I +    S   +E   EANP  +     +  + AGVNR+S GVQ
Sbjct: 62  TPTSLSPVQLEKLMDSIHRVLKPSDGLIEFAAEANPDDLSPEKLKIMKNAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E++ L+ +GR H   +   +   AR   F  +S DL++ LP QT+   +  ++ ALS 
Sbjct: 122 TFEDELLQKIGRVHKQKDVFTSFERARALGFDNISLDLMFGLPGQTLADLDNSVKTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP++    ++Y       S  G+  YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQEQEAEMYETVMRQMSEAGIRQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GAH  +       A  +    + +++++ + G    +
Sbjct: 242 KPGYESQHNLTYWSNEEYFGFGAGAHGYISGTRTVNAGPV----KHYMQLIEEKGLPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              ++ E+Q +E + +GLR   G+  + +    GR++D    +  ++L  +G I   + S
Sbjct: 298 THEVTREEQIEEEMFLGLRKMSGVQKQAFLDKFGRSVDELFPDVLKDLTEKGLICDTEES 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T  G  + + V     
Sbjct: 358 -VALTHEGKLLGNEVFGAFL 376


>gi|260599284|ref|YP_003211855.1| hemN family oxidoreductase [Cronobacter turicensis z3032]
 gi|260218461|emb|CBA33599.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein yggW
           [Cronobacter turicensis z3032]
          Length = 378

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 209/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDNDAPWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++S+ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLALASDAEITMEANPGTVEADRFVEYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L  LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLARLGRVHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYEQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++ +    +   +  +HP  ++      G+ +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYLGIGCGAHGKITLADGCILRTAKTRHPRGYM-----TGNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  + ++ +  EF M   RL E     ++    G +   +  + +  +      E  +
Sbjct: 297 DKQHEVETQDKPFEFFMNRFRLLEPAPRAEFARYTGLSEAAIRPQIDEAIALNYLAETPE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T+ G   L+S++  L +
Sbjct: 357 S--WQITEHGKLFLNSLL-ELFL 376


>gi|228935637|ref|ZP_04098451.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228823997|gb|EEM69815.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 378

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 179/379 (47%), Gaps = 11/379 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGGTP
Sbjct: 5   YIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGGTP 63

Query: 82  SLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           + +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ+ 
Sbjct: 64  TALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQTF 123

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A +  V
Sbjct: 124 RDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTLGV 183

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S  
Sbjct: 184 QHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFSKG 243

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++  
Sbjct: 244 DNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLDVH 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRL 376
            ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E      +
Sbjct: 300 VVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEESD-GYV 358

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R T++G  + + V  +  +
Sbjct: 359 RLTRKGKLLGNEVFQSFLI 377


>gi|30264388|ref|NP_846765.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Ames]
 gi|47529839|ref|YP_021188.1| coproporphyrinogen III oxidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65321690|ref|ZP_00394649.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Bacillus anthracis str. A2012]
 gi|165872067|ref|ZP_02216707.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0488]
 gi|167634489|ref|ZP_02392809.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0442]
 gi|167638632|ref|ZP_02396908.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0193]
 gi|170687374|ref|ZP_02878591.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0465]
 gi|170707476|ref|ZP_02897930.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0389]
 gi|177653225|ref|ZP_02935477.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0174]
 gi|190566838|ref|ZP_03019754.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis Tsiankovskii-I]
 gi|196034544|ref|ZP_03101953.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           W]
 gi|227817093|ref|YP_002817102.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. CDC 684]
 gi|228916949|ref|ZP_04080510.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228929361|ref|ZP_04092384.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229123856|ref|ZP_04253049.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 95/8201]
 gi|229600096|ref|YP_002868606.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0248]
 gi|254684074|ref|ZP_05147934.1| coproporphyrinogen III oxidase [Bacillus anthracis str. CNEVA-9066]
 gi|254721908|ref|ZP_05183697.1| coproporphyrinogen III oxidase [Bacillus anthracis str. A1055]
 gi|254736422|ref|ZP_05194128.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741460|ref|ZP_05199147.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Kruger B]
 gi|254750898|ref|ZP_05202937.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Vollum]
 gi|254757774|ref|ZP_05209801.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Australia
           94]
 gi|301055809|ref|YP_003794020.1| coproporphyrinogen III oxidase [Bacillus anthracis CI]
 gi|30259046|gb|AAP28251.1| coproporphyrinogen dehydrogenase [Bacillus anthracis str. Ames]
 gi|47504987|gb|AAT33663.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|164712198|gb|EDR17735.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0488]
 gi|167513480|gb|EDR88850.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0193]
 gi|167529941|gb|EDR92676.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0442]
 gi|170127720|gb|EDS96593.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0389]
 gi|170668569|gb|EDT19315.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0465]
 gi|172081507|gb|EDT66579.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0174]
 gi|190561829|gb|EDV15798.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis Tsiankovskii-I]
 gi|195993086|gb|EDX57045.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           W]
 gi|227005310|gb|ACP15053.1| coproporphyrinogen dehydrogenase [Bacillus anthracis str. CDC 684]
 gi|228659570|gb|EEL15217.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus 95/8201]
 gi|228830267|gb|EEM75881.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228842670|gb|EEM87757.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229264504|gb|ACQ46141.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           anthracis str. A0248]
 gi|300377978|gb|ADK06882.1| coproporphyrinogen III oxidase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 378

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|145223274|ref|YP_001133952.1| coproporphyrinogen III oxidase [Mycobacterium gilvum PYR-GCK]
 gi|145215760|gb|ABP45164.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium gilvum
           PYR-GCK]
          Length = 398

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 177/389 (45%), Gaps = 16/389 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTG 67
           T       GVY+H PFC  +C YCDFN++            + ++ +   E+Q      G
Sbjct: 19  TAPADRPFGVYIHVPFCATRCGYCDFNTYTPAELGAGGATPDGWLTALRAELQMAAAHLG 78

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P  +S++F GGGTPSL+    +A +LD +  ++T++ + EIT E+NP S     F G R
Sbjct: 79  EPPPVSTVFVGGGTPSLLGAAGLARVLDAVRADFTLTPDAEITTESNPESTSPRFFAGLR 138

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
            AG  R+SLG+QS     LR L R H+   A+ A   AR   F  ++ DLIY  P +T  
Sbjct: 139 AAGYTRVSLGMQSTAPHVLRALDRVHSPGRAVDAAREARAEGFDHVNLDLIYGTPGETDD 198

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                   A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L     + 
Sbjct: 199 DLLRSADAAVEAGVDHVSGYALIVEDGTALARRVRRGEIARPDDDVHARRYELLDCRLTD 258

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN S    E  HNL YW  G + G GPGAH  V            KHP ++ 
Sbjct: 259 AGFTWYEVSNWSRPDGECRHNLGYWDGGQWWGAGPGAHGYVDATR----WWNVKHPNAYA 314

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             +      V + E + +E    E +M+  RLR G+             + E        
Sbjct: 315 ATLETGALPVADLEAIDAETSHVEEVMLKTRLRTGLPAATLSAR-----ERERAAVAVAD 369

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G + R        T RG  + D+V+ +L 
Sbjct: 370 GLL-RADGQSFVLTDRGRLLADAVVRDLL 397


>gi|212638675|ref|YP_002315195.1| coproporphyrinogen III oxidase [Anoxybacillus flavithermus WK1]
 gi|212560155|gb|ACJ33210.1| Coproporphyrinogen III oxidase [Anoxybacillus flavithermus WK1]
          Length = 383

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 113/379 (29%), Positives = 188/379 (49%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V  ++   + ++ + + EM+   +      + ++F GGG
Sbjct: 7   AAYIHIPFCTHICHYCDFNK-VFLHQQPVDAYLDALMIEMERTFERFPTSQLQTVFIGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I +   ++SNVE T+EANP  V        ++ GVNR+S GVQ+
Sbjct: 66  TPTSLTAKQLDRLLSAIHRTVPLASNVEFTVEANPDGVSDGQLYVLKQWGVNRLSFGVQT 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + LR +GR H    AI  I  A    F  ++ DL+Y LP QT+ Q +  L    S  
Sbjct: 126 FDNELLRHIGRTHTKETAIETIERANELGFHNINIDLMYGLPTQTIDQLKETLHITFSLP 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L IE  T+FY + K   L LPS+     +Y +        G   YE+SN++ 
Sbjct: 186 IQHVSAYSLIIEPKTVFYNLMKKQALRLPSQEEEAQMYEIIMEQMEQRGYKQYELSNYAQ 245

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN+ YW    Y G G GAHS +    +  A  I+K    +++++ +     +  
Sbjct: 246 NGFNSRHNMTYWNNEYYYGFGAGAHSYMNGVRYVNAGPIKK----YIQLIERGQFPYINT 301

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             +S E+Q +E + +GLR  EG++  ++    G+ +    +  +    R G +E  + + 
Sbjct: 302 HVVSKEEQMEEHMFLGLRKSEGVNKDEFFRRYGKTVHDVFDEAIALQKRNGLLEETEEA- 360

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG  + + V  +  
Sbjct: 361 IVLTHRGKLLGNEVFQSFL 379


>gi|167837504|ref|ZP_02464387.1| coproporphyrinogen III oxidase [Burkholderia thailandensis MSMB43]
          Length = 405

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 128/381 (33%), Positives = 210/381 (55%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH+P+CV+KCPYCDFNSH  +    + + +++ +   +++    L   R + ++F
Sbjct: 28  PLALYVHFPWCVRKCPYCDFNSHEWKDGGALPERDYLGALRADLEHALPLVWGRQVHTVF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +L  +     + ++ EIT+EANP + E   F  +R +GVNR+S+
Sbjct: 88  IGGGTPSLLSAAGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSI 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  E  L+ LGR H+A++A AA  +A   F   + DL++ALP QT+ +   +L+ AL
Sbjct: 148 GIQSFSEAHLKALGRIHDATQARAAAEIAARTFDNFNLDLMFALPNQTLDECRADLETAL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+A  HLSLY LT+E  T F K        +P ++ + D+ +     T+  G   YE+S 
Sbjct: 208 SFAPPHLSLYHLTLEPNTYFAKFPP----TVPDDDTSADMQDWLHERTAQAGYARYEVSA 263

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    +  HNLNYWR+GDY+GIG GAH+++   +  +  +  KHP ++++  +  G AV
Sbjct: 264 YAKPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKA-GAAV 322

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            E+  +       EF++  LRL EG+    +    G +L          +R+G I     
Sbjct: 323 QEEREVGPHDLPFEFMLNALRLVEGVPTHSFAERTGMSLASIGPALAQAERRGLIVH-DH 381

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T  G   L+ + A   
Sbjct: 382 TRIAPTPLGQRFLNDLQALFL 402


>gi|328554285|gb|AEB24777.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208]
 gi|328912682|gb|AEB64278.1| Oxygen-independent coproporphyrinogen-III oxidase 1 [Bacillus
           amyloliquefaciens LL3]
          Length = 379

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ S   EM    + TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNSLEKEMINTIERTGRPDLRTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ + P  +  ++D + +    S   +E  +EANP  +     +  + AGVNR+S GVQ
Sbjct: 62  TPTSLSPVQLDKLMDSVHRVLKPSDGLIEFAVEANPDDLSSEKLRILKNAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L+ +GR H   +   +   AR   F  +S DL++ LP QT+   +  ++ ALS 
Sbjct: 122 TFEDALLQKIGRVHKQKDVFTSFERARALGFDNISLDLMFGLPNQTLDDLDNSVKTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP++    ++Y       S   +  YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQEKEAEMYETVMRQMSEASIRQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GAH  +       A  +    + +++++ + G    +
Sbjct: 242 KPGYESQHNLTYWSNEEYFGFGAGAHGYISGTRTVNAGPV----KHYMQLIEEKGLPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              ++ E+Q +E + +GLR   G+  K +    GR++D    +  +NL  +G I   + S
Sbjct: 298 THEVTREEQIEEEMFLGLRKMSGVQKKAFLDKFGRSVDELFPDVLKNLADKGLICDTEKS 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T  G  + + V     
Sbjct: 358 -VALTHEGKLLGNEVFGAFL 376


>gi|300780712|ref|ZP_07090566.1| coproporphyrinogen III oxidase [Corynebacterium genitalium ATCC
           33030]
 gi|300532419|gb|EFK53480.1| coproporphyrinogen III oxidase [Corynebacterium genitalium ATCC
           33030]
          Length = 410

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 181/383 (47%), Gaps = 14/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQW-MRQLTGPRSISS 73
           S+  GVYVH PFC  +C YCDFN++     +     ++ +   E++           + +
Sbjct: 37  SSGFGVYVHVPFCATRCGYCDFNTYTPSETETSYAAYLDALERELEMGAASTDLTGGVDT 96

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+    +  ILD I + + +  + E+T E+NP S     F+G ++AG  R+
Sbjct: 97  VFIGGGTPSLLGADGLGRILDTIKRTFGLKPDAEVTTESNPESTSPEYFEGLKRAGFTRV 156

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+QS     L+ L R H    A+AA   A+   F  ++ DLIY  P +T    +  L 
Sbjct: 157 SLGMQSASTPVLKILDRQHTPGRAVAAAKEAQRAGFEHVNLDLIYGTPTETEDDVKKSLD 216

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L   +DH+S Y L +E GT   +    G L  P E+   D Y L  S     G   YE
Sbjct: 217 HVLDAGMDHVSAYSLIVEDGTAMARKINKGQLPAPDEDTYADRYELIASTLEEAGFGWYE 276

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN +  G E  HNL YWR G++ G GPGAH  V     R      K PE++ + +    
Sbjct: 277 VSNWAKPGGECQHNLIYWRGGNWWGAGPGAHGYVG----RTRFMNVKRPETYNQKLATGQ 332

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +  +E ++  +   E +M+GLRL+EGI     +            R  +  G +    
Sbjct: 333 LPIASEETITDAEHHFEQIMLGLRLKEGIPRSWIQ-----PGAEAVLRKHRDAGLL--TT 385

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  T  G  + D ++ ++  
Sbjct: 386 GERIAVTDEGRLLADGIVTDILA 408


>gi|157960949|ref|YP_001500983.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella pealeana ATCC 700345]
 gi|157845949|gb|ABV86448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella pealeana ATCC 700345]
          Length = 378

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 199/382 (52%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q  +I + + +++        R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQHGELPQTEYIDALIKDLKQDLHYVQGRRLDTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  +L  + K    S N+EIT+EANP ++E ++F+ Y KAGV R+S+GV
Sbjct: 66  GGTPSLFDAAQIGRLLAEVDKLVPFSDNIEITMEANPGTLEHDDFEAYCKAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR HN  EA IAA     + +   + DL++ LP Q+  +   +++ A  
Sbjct: 126 QSFSSDKLNLLGRIHNKDEAHIAAQKAKVSGYQSFNLDLMHGLPNQSFDEALSDIETAAE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 186 LAPPHLSWYQLTIEPNTLFHSKPP----QLPDDENLWQIYEQGQKRLAALGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH ++     +  V     KHP+ +L       + 
Sbjct: 242 AKEGFQCRHNLNYWQFGDYLGIGCGAHGKITLLDDNKIVRTVKIKHPKGYLAA----DNY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
             E   +  E +A E+LM  LRL   I   ++E   G   D   +  +    +G +    
Sbjct: 298 TDETTEVVEEDRALEYLMNRLRLMSPIPKVEFEQRTGLTRDTISDGVKQGCAKGLMTESD 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ +++   
Sbjct: 358 -EHWQLTSKGHMFVNELLSQFL 378


>gi|148260690|ref|YP_001234817.1| coproporphyrinogen III oxidase [Acidiphilium cryptum JF-5]
 gi|146402371|gb|ABQ30898.1| coproporphyrinogen III oxidase, anaerobic [Acidiphilium cryptum
           JF-5]
          Length = 382

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 174/382 (45%), Positives = 239/382 (62%), Gaps = 6/382 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFC  KCPYCDFNSHV R ++ +   + + L E+ +     GPR ++SIFF
Sbjct: 2   TPLALYIHWPFCKAKCPYCDFNSHV-RERIPERRIVAALLAELDFEAARLGPRRLTSIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ ++ ++    + +  + ++EIT+EANP+S+E   F+ YR+AGVNR+S+G
Sbjct: 61  GGGTPSLMAPEGVSALIARACRLFAPAPDLEITLEANPTSIEAGRFRAYREAGVNRVSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL + +LRFLGR H A+EA+AA+ L R IFPR+SFDLIYA P QT+  W  EL  AL+
Sbjct: 121 VQSLNDDALRFLGREHGAAEAMAAVELGRAIFPRLSFDLIYARPGQTLAAWRAELGAALA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +DHLSLYQLTIE GT F   H  GD  LP ++ A  LY+ T    +  GL  YEISN+
Sbjct: 181 VGLDHLSLYQLTIEPGTRFATAHARGDFALPEDDDAAALYDATAEEAARFGLGPYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YWRY DY GIG GAH R+ +G   +A    + PE W   V   GH   
Sbjct: 241 AKPGEESRHNLAYWRYRDYAGIGAGAHGRISLGGTLLATRRHRAPEEWAARVEAAGHGST 300

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
           E+  + ++++A E L+MGLRL EGI    +    GR+    LD +        G+++   
Sbjct: 301 EEIEIGADERAREALLMGLRLAEGIDRDAYAARTGRDLMDMLDPDVTAQAIEAGYLDVT- 359

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +R+  T  G   LDS++A L 
Sbjct: 360 PARVSATYEGRKRLDSLLAALL 381


>gi|119900254|ref|YP_935467.1| coproporphyrinogen III oxidase [Azoarcus sp. BH72]
 gi|119672667|emb|CAL96581.1| coproporphyrinogen oxidase [Azoarcus sp. BH72]
          Length = 407

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/385 (35%), Positives = 204/385 (52%), Gaps = 10/385 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSI 71
                L +YVH+P+CV+KCPYCDFNSH  R +  + +E +  + + +++        R +
Sbjct: 27  SAPPPLALYVHFPWCVRKCPYCDFNSHAPRGETAIPEEAWAAAVVADLEAALPQVWGRRV 86

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSL+    +  +L  I     +    EIT+EANP +VE   F+ +R AGVN
Sbjct: 87  HSIFIGGGTPSLMSAPVLDRLLTDIRMRLPLDPMAEITLEANPGTVEAARFRDFRAAGVN 146

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQS ++  L  LGR H + EA  AI  A   F R++ DL+YALP+Q +     +L
Sbjct: 147 RLSLGVQSFDDAMLLRLGRIHGSDEAKRAIEGALAHFERVNIDLMYALPQQGLDAALADL 206

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL + V HLS Y LT+E  T F          LP ++ A D+ +  ++  +A G   Y
Sbjct: 207 DTALGFGVTHLSCYHLTLEPNTPFA----HDPPPLPDDDSAADMQDAIEARLAAAGFRHY 262

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E S  +  G E  HNLNYW++GDY+GIGPGAH ++      V     KHP+ +L+   + 
Sbjct: 263 ETSAFARPGQECRHNLNYWQFGDYLGIGPGAHGKLSNHEGIVREMRHKHPQRYLEGAARG 322

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
              V E+  ++  +   EF+M  LRL  G  +  +    G  L       R  ++ G +E
Sbjct: 323 DF-VQERRSVTVAELPFEFMMNALRLTGGFPLALFAARTGLPLAAVEARLRAARQDGLLE 381

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            +    +R T+RG   L+ ++    
Sbjct: 382 -IDADSVRPTERGRHFLNDLLQRFL 405


>gi|209920414|ref|YP_002294498.1| coproporphyrinogen III oxidase [Escherichia coli SE11]
 gi|300815575|ref|ZP_07095799.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 107-1]
 gi|209913673|dbj|BAG78747.1| putative oxidase [Escherichia coli SE11]
 gi|300531504|gb|EFK52566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 107-1]
 gi|324017228|gb|EGB86447.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 117-3]
          Length = 378

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|47569313|ref|ZP_00239997.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
 gi|47553984|gb|EAL12351.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
          Length = 379

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q +G +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQHNQEKGLLEESD-E 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|170766060|ref|ZP_02900871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia albertii TW07627]
 gi|170125206|gb|EDS94137.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia albertii TW07627]
          Length = 378

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 207/382 (54%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLTLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH ++     R+  I+  +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKITFSDGRILRITKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G +  +          QG++     
Sbjct: 297 ESQRDVETADKPFEFFMNRFRLLEPAPRVEFSQYTGLSEAVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|117619818|ref|YP_855387.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561225|gb|ABK38173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 381

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 135/382 (35%), Positives = 211/382 (55%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++    ++ + L +++        R +SSIF G
Sbjct: 6   PLSLYIHVPWCVQKCPYCDFNSHAQKGELPHLEYVAALLEDLEQDLHWAQGRPLSSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++++ EIT+EANP +VE + F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLSVEAMQALLDGVRARIELTADCEITMEANPGTVEADKFAGFQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H  +EA  A  LA  I  P  + DL++ LP Q++     +LQ+A+ 
Sbjct: 126 QSFQQEKLTRLGRIHGPAEARKAAELAHAIKLPTFNLDLMHGLPDQSLADALSDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F          LP ++   D+Y    ++ +AHG   YEIS +
Sbjct: 186 CAPPHLSWYQLTIEPNTAFASKPP----TLPEDDTLWDIYEQGHAMLTAHGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH +V        +  +  KHP+ +L     +   
Sbjct: 242 AKAGYQCRHNLNYWRFGDYLGIGCGAHGKVTDLANPQILRTAKVKHPKGYLD---PSRPY 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           + E+  ++++    E+ M   RL E     ++E   G  L+         Q +  IE + 
Sbjct: 299 LDEQWQVTADDLPLEYFMNRFRLFEPAPKAEFEAYTGLGLERVETMLTIAQSKELIEDL- 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T  G   L+ V+  L 
Sbjct: 358 GDSWQLTPLGHRYLN-VLLQLF 378


>gi|228993060|ref|ZP_04152983.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           pseudomycoides DSM 12442]
 gi|228766708|gb|EEM15348.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           pseudomycoides DSM 12442]
          Length = 378

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 9/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     ++ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFENMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +           GVNRIS GVQ
Sbjct: 62  TPTALNVEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L+ +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E     +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTIFYNLMNKGKLRLPGEEHEARMYEIVMDEMENHGYKQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KEGYESRHNLTYWNNEQYYGFGAGAHSYVNGERIQNVGP----LKQYFSKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQFSR 375
              ++ +++ +E L +GLR  +G+S   ++   G  +D    + L   ++  + + + + 
Sbjct: 298 VHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMDEIFAKQLLSNKEYGLLQDKGNH 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T++G  + + V  +  +
Sbjct: 358 VCLTRQGKLLGNEVFQSFLI 377


>gi|218905454|ref|YP_002453288.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH820]
 gi|218536984|gb|ACK89382.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           AH820]
          Length = 378

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVSFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|329934630|ref|ZP_08284671.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
 gi|329305452|gb|EGG49308.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
          Length = 410

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 119/391 (30%), Positives = 195/391 (49%), Gaps = 22/391 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMRQLTG-- 67
             LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  R++ G  
Sbjct: 28  RPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLIDEVRLARKVLGDD 87

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           PR + ++F GGGTP+L++  ++  +L  + + + ++++ EIT EANP SV+       R+
Sbjct: 88  PREVRTVFVGGGTPTLLDAADLVRMLGAVREEFGLAADAEITTEANPESVDPAYLAALRE 147

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G NRIS G+QS  +  L+ L R H        +  AR   F  ++ DLIY  P ++   
Sbjct: 148 GGFNRISFGMQSARQHVLKVLDRTHTPGRPERCVAEARAAGFEHVNLDLIYGTPGESDED 207

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL    DH+S Y L +E+GT      + G++ +  ++V  D Y + + + S+ 
Sbjct: 208 WRASLDAALGAGPDHVSAYALIVEEGTRLAARIRRGEVPMTDDDVHADRYLIAEEVLSSA 267

Query: 247 GLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V     KHP ++ 
Sbjct: 268 GYDWYEVSNWATSDKARCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNVKHPGAYA 323

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             + +       +E L+ E +  E +++ LRLREG+ +        R   +   R     
Sbjct: 324 GALAEGRSPGAGREILTEEDRRVERILLELRLREGVPLDLL-----RTEGLAASRRALAD 378

Query: 366 GFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
           G ++    +  R   T RG  + D+V+ +L 
Sbjct: 379 GLLDPGPYEAGRAALTLRGRLLADAVVRDLV 409


>gi|20807433|ref|NP_622604.1| coproporphyrinogen III oxidase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515956|gb|AAM24208.1| Coproporphyrinogen III oxidase and related FeS oxidoreductases
           [Thermoanaerobacter tengcongensis MB4]
          Length = 375

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/381 (31%), Positives = 208/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDFNS+   Y+   E+++++ L E++          + S++ 
Sbjct: 2   REIGIYIHIPFCKKKCYYCDFNSYAG-YEHLMEDYLKALLEEVKTYSD--RSFRVISVYI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ + P ++  +L  + K++ VS + EITIE NP  +  +  + Y+  G+NRIS+G
Sbjct: 59  GGGTPNFLPPSHVERVLSEVHKDYNVSRDAEITIEVNPGLLTEDKLKIYKINGINRISMG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+ + + L ++GR H A + +    L R  F  ++ DLIYALP Q+  +W+  L + + 
Sbjct: 119 LQAFQNRLLEYIGRIHTAEDFLENYALVRKYFDNVNVDLIYALPTQSFEEWQETLTKVVE 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S Y L +E+ TLF +++K+  L +  E   + +Y+       + G   YEISN 
Sbjct: 179 LKPEHISTYSLILEENTLFGRLYKENRLPVVGEEEELKMYHWGIEFLKSKGYCHYEISNF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           + LG +  HN+ YW   +Y+G G GAHS  +         IEK+ E+ LK       A  
Sbjct: 239 ALLGYQCRHNILYWECREYLGFGAGAHSYFEGTRWNNVERIEKYIEAILKR----KDARE 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQF 373
           E   LS E +  EF+ +GLR+R+G+  +++    G ++    E      ++ G IE+   
Sbjct: 295 EIINLSFEDKMSEFMFLGLRMRKGVCEEEFRKRFGISMFERYEEIFIKYEKMGLIEK-DK 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             +R T++G+ + + +  +  
Sbjct: 354 DCVRLTEKGIDVSNVIFEDFL 374


>gi|228987568|ref|ZP_04147686.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228772166|gb|EEM20614.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 378

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q +G +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQHNQEKGLLEESD-E 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|116670786|ref|YP_831719.1| coproporphyrinogen III oxidase [Arthrobacter sp. FB24]
 gi|116610895|gb|ABK03619.1| coproporphyrinogen III oxidase, anaerobic [Arthrobacter sp. FB24]
          Length = 409

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 122/394 (30%), Positives = 185/394 (46%), Gaps = 22/394 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGP- 68
           G      G+YVH PFC  +C YCDFN++      G   Q+ +  + + E+++  +     
Sbjct: 24  GAAQRRFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYASTAIAEVEFAAKALQGS 83

Query: 69  ----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R + ++FFGGGTP+L+  +++A IL      W +    E+T EANP SV   + Q 
Sbjct: 84  GLPERRLGTVFFGGGTPTLLPAEDLARILTAAVSQWGLEPGAEVTTEANPDSVTPESLQL 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AG  R+S G+QS     L+ L R H  S     +  AR+    +S DLIY  P +++
Sbjct: 144 LADAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPQVVQWARDAGLAVSLDLIYGTPGESL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L+ ALSY  DH+S Y L +E GT      + G++    ++     Y L   + +
Sbjct: 204 EDWRYSLETALSYGPDHISAYALIVEDGTKLAAQIRRGEVPGIDDDDHAAKYELADELIT 263

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GL  YE+SN S    +   HNL YWR  D+ GIGPGAHS V      V     KHP +
Sbjct: 264 AAGLGWYEVSNWSRTPEQACRHNLAYWRGDDWWGIGPGAHSHVGG----VRWWNVKHPTA 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNL 362
           +   +         +E L +E +  E +M+  RL  G+ V       G  +   +    L
Sbjct: 320 YAGRLAGGVSPAAGRETLDAETRNVERVMLEARLSTGLEVS------GLGVSGRQAVAGL 373

Query: 363 QRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              G ++       RL  T +G  + D+V+  + 
Sbjct: 374 IADGLVDPAAAFRGRLVLTLKGRLLADAVVRRIL 407


>gi|42783444|ref|NP_980691.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 10987]
 gi|42739373|gb|AAS43299.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           ATCC 10987]
          Length = 378

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         +  VNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGEVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGNNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-G 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|313902209|ref|ZP_07835617.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467544|gb|EFR63050.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 482

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 202/380 (53%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGG 78
            +Y+H P+C ++C YCDFN+++     G+  ++ +   E+  +    G  R + S+F GG
Sbjct: 103 ALYIHVPYCRQRCYYCDFNTYLL-DPEGKRRYLAALERELDLLAADPGLTRPLVSVFVGG 161

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  +  +L+ + + + ++   EIT+E NP +++    +  R  GV R+SLG+Q
Sbjct: 162 GTPSLLEPAELERLLEAVHRRFALAPGAEITVECNPGTLDEGRLRALRGGGVTRLSLGLQ 221

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++++ L+ +GR+H  ++  A     R   F  ++ DLI+ LP QT+ QWE  L+  ++ 
Sbjct: 222 AVQDELLQAIGRDHTWADFQATYERVRRAGFDNVNVDLIFGLPGQTLAQWEESLRAVVAL 281

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +  GT F++  + G L LP E+    +++    +  A G   YEISN +
Sbjct: 282 EPEHVSCYGLELHPGTPFHRRWEAGLLDLPGEDAERAMFDRAYEVLGAAGFVRYEISNFA 341

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN  YW  G Y+G GPGA S  +    R  +    HP ++   + +   AV  
Sbjct: 342 RPGRESVHNRVYWLNGSYLGAGPGAWSCWQGERRRNRL----HPLAYAASLEQGEPAVDL 397

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           +E +   Q  +E +++GLRL EG+    +    G        E    L   G++ R +  
Sbjct: 398 REPVGRRQAMEETMILGLRLAEGVEEARFARRFGLTPAEAFPEAVARLLAGGWLLR-EAG 456

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            LR + + + + +SV+A   
Sbjct: 457 YLRLSLQAVPVANSVLAEFV 476


>gi|285017588|ref|YP_003375299.1| coproporphyrinogen III oxidase [Xanthomonas albilineans GPE PC73]
 gi|283472806|emb|CBA15311.1| putative coproporphyrinogen III oxidase protein [Xanthomonas
           albilineans]
          Length = 381

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 128/381 (33%), Positives = 217/381 (56%), Gaps = 10/381 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + + ++     L   R + S+F
Sbjct: 2   PPPLSLYVHLPWCVRKCPYCDFNSHAAKGALPFDAYVDALIRDLDQDLPLVWGRVVHSVF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL  P+ IA  L+  +     +  +EIT+E NP + E   F  Y  AGVNR+S 
Sbjct: 62  FGGGTPSLFPPEAIARFLEAASARLRFAPGLEITLETNPGTAEHGRFDRYLAAGVNRLSF 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS ++ +L+ LGR H+++EA  A+ LA++  F  ++ DL+YALP+QT+ + E ++ RA
Sbjct: 122 GIQSFDDAALQRLGRIHDSAEAERAVKLAQDAGFTNLNLDLMYALPQQTLAEAERDVTRA 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    H+S YQLT+E  TLF          +P ++ A ++    Q++ +A G   YE+S
Sbjct: 182 MALQPTHISHYQLTLEPNTLFAARPPQ---GIPEDDDAWNMQEHCQALLAAAGYAQYEVS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV--AISIEKHPESWLKMVRKNG 312
            ++  G   +HNLNYW +GDY+GIG GAH ++  G+ +        KHP++++       
Sbjct: 239 AYAREGERCVHNLNYWTFGDYLGIGAGAHGKISSGAEQRILRRWKHKHPQAFMAAAGTPA 298

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
            A+   +++  +Q+  E+++  LRL  G +++D+    G    I     ++ Q   ++ +
Sbjct: 299 -AIGGDDWIEPKQRPFEYMLNALRLNHGFALRDFTARTGLAPAIIAPALQHAQACQWL-Q 356

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
           V   ++  T+ G    + VIA
Sbjct: 357 VNDDKVMPTELGRRFTNDVIA 377


>gi|318076113|ref|ZP_07983445.1| coproporphyrinogen III oxidase [Streptomyces sp. SA3_actF]
          Length = 413

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 196/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
              + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++
Sbjct: 22  AQALDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+
Sbjct: 82  LARRVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y 
Sbjct: 202 GTPGESDADWHASLEAAIGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +   + +  G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IADELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E L  E +  E +++ LRL EG  + D  + AGR    
Sbjct: 318 NVKHPGAYAAALAEGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRE--- 373

Query: 357 ECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              R+L   G ++   +       T RG  + D+V+ +L 
Sbjct: 374 AAARHL-GDGLLDPGAYAKGAAVLTLRGRLLADAVVRDLV 412


>gi|197334831|ref|YP_002155180.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           fischeri MJ11]
 gi|197316321|gb|ACH65768.1| putative oxygen-independent coproporphyrinogen III oxidase [Vibrio
           fischeri MJ11]
          Length = 386

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 134/387 (34%), Positives = 207/387 (53%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PRSI 71
              L +Y+H P+C++KCPYCDFNSH  + ++ +  +I + + ++            PR +
Sbjct: 4   PPPLSLYIHIPWCIQKCPYCDFNSHALKAEIPEAQYISALIDDLDTDLARYDMQSEPRKL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI    I  +L  + K    + ++EIT+EANP +VE   F  YR+AGVN
Sbjct: 64  HSIFIGGGTPSLITGPEIKRLLSEVEKRLPFADDIEITMEANPGTVEAGRFVEYRQAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS +++ L  LGR H   EAI A HLA        + DL++ LP Q++     +
Sbjct: 124 RISIGVQSFQQEKLEKLGRIHGKDEAIRAAHLAHEAQLNSFNLDLMHGLPNQSIEDALSD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ+A+     HLS YQLTIE  T+FY         LP ++   D++     + +  G   
Sbjct: 184 LQQAIDLNPPHLSWYQLTIEPNTVFYYKPP----TLPDDDDLWDIFEQGHQMLAKAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S +G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L + +
Sbjct: 240 YEISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKIKHPRGFLDLTK 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
              + + E+E +    +  EF M   RL E    +D+    G   D   E     + + +
Sbjct: 300 --PYLIDEQEVMDH-DRPFEFFMNRFRLLEACPKQDFIDKTGLGFDTIQETIDWAKEKKY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           +E  + +  + T+ G   L+ ++    
Sbjct: 357 LEETE-THWQITEHGKLFLNDMLEAFM 382


>gi|326403884|ref|YP_004283966.1| putative coproporphyrinogen III oxidase [Acidiphilium multivorum
           AIU301]
 gi|325050746|dbj|BAJ81084.1| putative coproporphyrinogen III oxidase [Acidiphilium multivorum
           AIU301]
          Length = 382

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 174/382 (45%), Positives = 240/382 (62%), Gaps = 6/382 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+HWPFC  KCPYCDFNSHV R ++ +   + + L E+ +     GPR ++SIFF
Sbjct: 2   TPLALYIHWPFCKAKCPYCDFNSHV-RERIPERRIVAALLAELDFEAARLGPRRLTSIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P++++ ++    + +  + ++EIT+EANP+S+E   F+ YR+AGVNR+S+G
Sbjct: 61  GGGTPSLMAPESVSALIARSCRLFAPAPDLEITLEANPTSIEAGRFRAYREAGVNRVSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL + +LRFLGR H A+EA+AA+ L R IFPR+SFDLIYA P QT+  W  EL  AL+
Sbjct: 121 VQSLNDDALRFLGREHGAAEAMAAVELGRAIFPRLSFDLIYARPGQTLAAWRAELGAALA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +DHLSLYQLTIE GT F   H  GD  LP ++ A  LY+ T    +  GL  YEISN+
Sbjct: 181 VGLDHLSLYQLTIEPGTRFATAHARGDFALPEDDDAAALYDATAEEAARFGLGPYEISNY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YWRY DY GIG GAH R+ +G   +A    + PE W   V   GH   
Sbjct: 241 AKPGEESRHNLAYWRYRDYAGIGAGAHGRISLGETLLATRRHRAPEEWAARVEAAGHGST 300

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQ 372
           E+  + ++++A E L+MGLRL EGI    +    GR+    LD +        G+++   
Sbjct: 301 EEIEIGADERAREALLMGLRLAEGIDRDAYAARTGRDLMDMLDPDVTAQAIEAGYLDVT- 359

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +R+  T  G   LDS++A L 
Sbjct: 360 PARVSATYEGRKRLDSLLAALL 381


>gi|126724521|ref|ZP_01740364.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2150]
 gi|126705685|gb|EBA04775.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2150]
          Length = 384

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 177/385 (45%), Positives = 239/385 (62%), Gaps = 13/385 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               GVYVHWPFC  KCPYCDFNSHV    V Q+ +  +FL+E++        R +SSI+
Sbjct: 7   HGGFGVYVHWPFCQSKCPYCDFNSHVSAN-VDQKRWFSAFLSEIERTVVGLEGRQLSSIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP  +  ILD +   + +++++EIT+EANP+SVE   FQ Y  AGVNR+S+
Sbjct: 66  FGGGTPSLMEPWLVEGILDALKSKFLIANDIEITLEANPTSVEAGRFQAYHDAGVNRVSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L    L+ LGR H+ +E   A   AR+IF R+SFDLIYA   QT+ QW  EL++AL
Sbjct: 126 GIQALNVPDLKRLGRLHSVNEGQDAFDTARHIFDRVSFDLIYARQDQTLDQWRSELKQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + +VDHLSLYQLTIE GT F      G L  LPSE++  D+Y LTQ +  A G+ AYE S
Sbjct: 186 AMSVDHLSLYQLTIEPGTAFGDRFSKGGLAGLPSEDLGADMYELTQELCEAAGMPAYETS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+ +G+ES HNL YW  GDY+G+GPGAH R+    HR+A      P  WL  V  +G  
Sbjct: 246 NHAAVGSESRHNLVYWNSGDYLGLGPGAHGRITQYGHRIATETHLAPGKWLDAVENSGS- 304

Query: 315 VVEKEFLSSE----QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               E LS +    +  +E LMMGLRLR GI    +E +   N  +E  + L+  G +E 
Sbjct: 305 ---GESLSRKQDGFEAQEEALMMGLRLRSGIDEVRFEQV--LNTKVEKIQGLKEIGMLE- 358

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                LR T++G  +L++++  L  
Sbjct: 359 TANGFLRTTEQGRPVLNAILRELLA 383


>gi|91774396|ref|YP_544152.1| coproporphyrinogen III oxidase, anaerobic [Methylobacillus
           flagellatus KT]
 gi|91708383|gb|ABE48311.1| coproporphyrinogen III oxidase, anaerobic [Methylobacillus
           flagellatus KT]
          Length = 384

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 132/381 (34%), Positives = 209/381 (54%), Gaps = 8/381 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
                  L +Y+H P+CV+KCPYCDFNSH  R ++ +  ++ + + +++        R +
Sbjct: 5   APTQPPPLSLYIHIPWCVRKCPYCDFNSHESRTEIPEAAYVDALIADLEQSVPRIWGRRV 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIFFGGGTPSL  P+ I  IL  +     +S + E+T+EANP +V+  +F+GYR AGVN
Sbjct: 65  HSIFFGGGTPSLFSPKAIDRILSNVRALVPLSVDCEVTLEANPGTVDAAHFRGYRAAGVN 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+QS +   L+ LGR H+ ++A+AA  LA   F  ++ D++YALP Q +     + 
Sbjct: 125 RLSLGIQSFDSTYLQKLGRIHDEAQAMAAADLALQTFDSVNLDVMYALPGQHLEHALADA 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           QRA S    HLS Y LT+E  T F++        LP ++ +  +    + +   HG   Y
Sbjct: 185 QRACSLQPAHLSFYHLTLEPNTPFHRTPP----ALPDDDTSAAMQEAIEDLLGRHGYEHY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E S  +  G +  HN NYW +GDY+GIG GAHS++         S  KHP+ +L+     
Sbjct: 241 ETSAFAQHGKQCRHNRNYWLFGDYLGIGAGAHSKLSFHDRITRESRHKHPKRYLEH-ASR 299

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
           G+AV  +  ++  +   EF+M  LRL  G +   +E+  G  L+      ++  ++G ++
Sbjct: 300 GNAVEHQWQIARHELPFEFMMNALRLTGGFAPALFELRTGLPLESIAHTLQHAVQKGLLD 359

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
             Q  R+  T  G   L+ ++
Sbjct: 360 VGQ-ERIAPTLLGQRFLNELL 379


>gi|318061217|ref|ZP_07979938.1| coproporphyrinogen III oxidase [Streptomyces sp. SA3_actG]
          Length = 410

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 196/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
              + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++
Sbjct: 19  AQALDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIR 78

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+
Sbjct: 79  LARRVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVD 138

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY
Sbjct: 139 PAYLETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIY 198

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y 
Sbjct: 199 GTPGESDADWHASLEAAIGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYL 258

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +   + +  G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 259 IADELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 314

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E L  E +  E +++ LRL EG  + D  + AGR    
Sbjct: 315 NVKHPGAYAAALAEGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRE--- 370

Query: 357 ECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              R+L   G ++   +       T RG  + D+V+ +L 
Sbjct: 371 AAARHL-GDGLLDPGAYAKGAAVLTLRGRLLADAVVRDLV 409


>gi|52141187|ref|YP_085643.1| coproporphyrinogen III oxidase [Bacillus cereus E33L]
 gi|118479485|ref|YP_896636.1| coproporphyrinogen III oxidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|51974656|gb|AAU16206.1| coproporphyrinogen oxidase (oxygen-independent coproporphyrinogen
           III oxidase) [Bacillus cereus E33L]
 gi|118418710|gb|ABK87129.1| coproporphyrinogen III oxidase, anaerobic [Bacillus thuringiensis
           str. Al Hakam]
          Length = 379

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 178/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   + L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRNELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEE-SNG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|89900421|ref|YP_522892.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodoferax ferrireducens T118]
 gi|89345158|gb|ABD69361.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodoferax ferrireducens T118]
          Length = 394

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 138/380 (36%), Positives = 219/380 (57%), Gaps = 9/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH P+C+KKCPYCDFNSH +R  ++ ++ ++ + + +++    LT  R++ SIF 
Sbjct: 17  PLSLYVHLPWCLKKCPYCDFNSHEMRAAELPEQRYLAALMADLEAALPLTWGRTVHSIFI 76

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P+ I  +L GI     + +  EIT+EANP S E + F+ +R AGV R+S+G
Sbjct: 77  GGGTPSLFSPEAIDHLLSGIRARLRLEAGCEITLEANPGSFEKDRFRAFRGAGVTRLSVG 136

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS  +  L+ LGR H++++A+AA+  A   F   + DL+YALP QT+   + ++ RAL+
Sbjct: 137 VQSFNDSFLKTLGRVHDSAQALAAVEEAAQAFDTFNLDLMYALPGQTLADVKQDMARALT 196

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  H+S+YQLTIE  T F K        LP ++ A D+ +L   +T + GL  YE+S +
Sbjct: 197 FSPPHISIYQLTIEPNTFFAKYPP----PLPEDDTAYDMLDLITDMTGSAGLQRYEVSAY 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G    HNLNYW++GDY+G+G GAHS++      V     + P  +++     GH + 
Sbjct: 253 AAPGHRCFHNLNYWQFGDYLGLGAGAHSKLSFAHRVVRQVRFREPGRYMEQALA-GHCLA 311

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS 374
           + E +S      EF++  LRL++G +++ +    G  +          Q QG I R   +
Sbjct: 312 QDEEVSRADLPFEFMLNALRLKDGFALQLFSERTGLAITTIQAALEQAQAQGLIVR-DLA 370

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  T RG   L  + +   
Sbjct: 371 RVTPTVRGFDFLSDLQSLFL 390


>gi|329901885|ref|ZP_08272972.1| Radical SAM family enzyme, coproporphyrinogen III oxidase-like
           protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327548977|gb|EGF33594.1| Radical SAM family enzyme, coproporphyrinogen III oxidase-like
           protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 418

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 130/378 (34%), Positives = 213/378 (56%), Gaps = 12/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            L +Y+H+P+CVKKCPYCDFNSH      +    +E ++ +   +++    L   R I +
Sbjct: 40  PLALYIHFPWCVKKCPYCDFNSHEVAGQSQSGFPEEAYLDAVRADLESALPLIWGRKIYT 99

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL+    +  ++  +     +    EIT+EANP + EV  F+ YR +G+NR+
Sbjct: 100 IFIGGGTPSLMSAAGLDRLMSDVRTLLPLDGAAEITMEANPGTFEVEKFRSYRASGINRL 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS   + LR LGR H+  EA  A+ +A + F   + DL+YALP QT+ +   +++ 
Sbjct: 160 SIGIQSFNGEHLRALGRIHDHDEARRAVDIAHSTFDNFNLDLMYALPSQTLAEATQDIRT 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL YA  HLSLY LT+E  T+F K        LP ++++ D+ ++  + T A G   YE+
Sbjct: 220 ALGYAPPHLSLYHLTMEPNTVFAKFPP----ALPDDDLSADMQDMIAAETGAAGYGHYEV 275

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S ++  G +S HNLNYW++GDY+G+G GAHS++      +  +  K P+S+++ + + G 
Sbjct: 276 SAYAQPGRQSRHNLNYWQFGDYLGVGAGAHSKLSFPHRIIRQARFKQPKSYMENMAR-GS 334

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERV 371
           A+ E+  ++  +   EF++  LRL  G  V  +    G  L+      +  + +G + R 
Sbjct: 335 AIQEENEIARGELGFEFMLNTLRLTSGFQVNLFAERTGLGLNAVESALQAAEAKGLLFR- 393

Query: 372 QFSRLRCTQRGMTMLDSV 389
               +R T  G   L+ +
Sbjct: 394 DHKTIRPTLLGQRFLNDL 411


>gi|193063528|ref|ZP_03044617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E22]
 gi|193067238|ref|ZP_03048206.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E110019]
 gi|194426329|ref|ZP_03058884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B171]
 gi|260845625|ref|YP_003223403.1| putative oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|307310424|ref|ZP_07590072.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|192930805|gb|EDV83410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E22]
 gi|192959195|gb|EDV89630.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E110019]
 gi|194415637|gb|EDX31904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli B171]
 gi|195183148|dbj|BAG66693.1| putative oxidase [Escherichia coli O111:H-]
 gi|257760772|dbj|BAI32269.1| predicted oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|306909319|gb|EFN39814.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|315062261|gb|ADT76588.1| predicted oxidoreductase [Escherichia coli W]
 gi|323162599|gb|EFZ48446.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli E128010]
 gi|323173831|gb|EFZ59460.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli LT-68]
 gi|323183526|gb|EFZ68923.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1357]
 gi|323377155|gb|ADX49423.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           KO11]
 gi|324119750|gb|EGC13630.1| radical SAM superfamily protein [Escherichia coli E1167]
          Length = 378

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 205/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|308174338|ref|YP_003921043.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens DSM 7]
 gi|307607202|emb|CBI43573.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens DSM 7]
          Length = 379

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ S   EM    + TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNSLEKEMINTIERTGRPDLRTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ + P  +  ++D I +    S   +E   EANP  +     +  + AGVNR+S GVQ
Sbjct: 62  TPTSLSPDQLEKLMDSIHRVLKPSDGLIEFAAEANPDDLSPEKLKIMKNAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E++ L+ +GR H   +   +   AR   F  +S DL++ LP QT+   +  ++ ALS 
Sbjct: 122 TFEDELLQKIGRVHKQKDVFTSFERARALGFDNISLDLMFGLPGQTLADLDNSVKTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP++    ++Y       S  G+  YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPAQEQEAEMYETVMRQMSEAGIRQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +       A  +    + +++++ + G    +
Sbjct: 242 KPGYESQHNLTYWSNEAYFGFGAGAHGYISGTRTVNAGPV----KHYIQLIEEKGLPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              ++ E+Q +E + +GLR   G+  + +    GR++D    +  ++L  +G I   + S
Sbjct: 298 THEVTREEQIEEEMFLGLRKMSGVQKQAFLDKFGRSVDELFPDVLKDLTEKGLICDTEES 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T  G  + + V     
Sbjct: 358 -VALTHEGKLLGNEVFGAFL 376


>gi|59711031|ref|YP_203807.1| coproporphyrinogen III oxidase [Vibrio fischeri ES114]
 gi|59479132|gb|AAW84919.1| predicted oxidoreductase [Vibrio fischeri ES114]
          Length = 386

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 132/387 (34%), Positives = 207/387 (53%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PRSI 71
              L +Y+H P+C++KCPYCDFNSH  + ++ +  +I + + ++            PR +
Sbjct: 4   PPPLSLYIHIPWCIQKCPYCDFNSHALKAEIPEAQYISALIDDLDTDLARYDMQSEPRKL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI    I  +L  + K    + ++EIT+EANP +VE   F  YR+AGVN
Sbjct: 64  HSIFIGGGTPSLITAPEIKRLLSEVEKRLPFAGDIEITMEANPGTVEAGRFVKYRQAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS +++ L  LGR H   EAI A HLA        + DL++ LP Q++     +
Sbjct: 124 RISIGVQSFQQEKLEKLGRIHGKDEAIRAAHLAHEAQLNSFNLDLMHGLPNQSIEDALSD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ+A+     HLS YQLTIE  T+FY         LP ++   D++     + +  G   
Sbjct: 184 LQQAIDLNPPHLSWYQLTIEPNTVFYYKPP----TLPDDDDLWDIFEQGHQMLAKAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S +G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L + +
Sbjct: 240 YEISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKIKHPRGFLDLTK 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
              + + E+E +    +  EF M   RL E    +++    G   D   E     + + +
Sbjct: 300 --PYLIDEQEVMDH-DRPFEFFMNRFRLLEACPKQEFLDTTGLGFDTIQETIDWAKEKKY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++  + +  + T+ G   L+ ++    
Sbjct: 357 LDETE-THWQITEHGKLFLNDLLEAFM 382


>gi|15838108|ref|NP_298796.1| coproporphyrinogen III oxidase [Xylella fastidiosa 9a5c]
 gi|9106539|gb|AAF84316.1|AE003980_8 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 383

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 216/380 (56%), Gaps = 10/380 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH P+CV+KCPYCDFNSH  +  +  + ++ + L ++++   L   R + S+F
Sbjct: 4   PPPLSLYVHLPWCVRKCPYCDFNSHQAKGALPFDAYVNALLRDLEYDLPLVWGRVVHSVF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I   L   A    ++ + EIT+E NP + E   F  Y  AG+NR+S 
Sbjct: 64  LGGGTPSLFPPEAIDRFLQIAAARLRLAPDAEITLETNPGTAEYGRFDRYLAAGINRLSF 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  + +LR LGR H++ +A  A+ LA++  F  ++ DL+YALP+QT+ + E +LQRA
Sbjct: 124 GIQSFNDVALRRLGRIHDSLQAEHAVKLAQDAGFTNINLDLMYALPEQTLLEAEHDLQRA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + A  HLS YQLT+E  T+FY         +P ++ A ++   TQ + +  G   YE+S
Sbjct: 184 FALAPTHLSYYQLTLEPNTVFYARPPQ---GIPDDDAAWEMQEHTQRLLAEAGYQHYEVS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNG 312
            ++  G + LHNLNYWR+GDY+GIG GAH ++  G   H +     KHP ++L       
Sbjct: 241 AYAREGWQCLHNLNYWRFGDYLGIGAGAHGKITSGVSQHVLRRWKCKHPYTYLDN-AGTV 299

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
            A+   E + + +   E+++  LRLR G  ++D+ +  G  ++           +G++ R
Sbjct: 300 SAIGGDEIVPTARLPFEYMLNLLRLRAGFRLQDFAVRTGLTVESIHAALSEAVARGWL-R 358

Query: 371 VQFSRLRCTQRGMTMLDSVI 390
            +  R+  T+ G+   + VI
Sbjct: 359 CELERVIPTELGLRFANDVI 378


>gi|304413276|ref|ZP_07394749.1| coproporphyrinogen III oxidase [Candidatus Regiella insecticola
           LSR1]
 gi|304284119|gb|EFL92512.1| coproporphyrinogen III oxidase [Candidatus Regiella insecticola
           LSR1]
          Length = 376

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 212/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C++KCPYCDFNSH  +  +  + +++  L ++     L   R I+SIF G
Sbjct: 6   PMSLYIHIPWCIQKCPYCDFNSHALKGDIPHQKYVEHLLADLDADLPLIDGRKINSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + ++ +L+G+     ++ + EIT+EANP +VE   F+ Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAEAMSQLLEGVNARLKLAEHAEITMEANPGAVEAERFRHYQQAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H + EA  A  LA  + F  ++ DL++ LP Q+  +   +L +A++
Sbjct: 126 QSFSASKLKKLGRVHGSDEAKQAAILANLLQFRSVNLDLMHGLPDQSHREALDDLHQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  H+S YQLTIE  T F          LP E+V   ++   Q I  + G   YE S +
Sbjct: 186 LAPAHISWYQLTIEPNTAFSSRPH----TLPDEDVLWAIFQQGQQILQSAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH ++   +  +  +++ KHP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKITRSNGEILRTVKTKHPRGFMQ-----GKYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            ++  +    +  EF M   RL E     D+  L G    ++    ++ L +   +E  Q
Sbjct: 297 DQQYNVVVADRPFEFFMNRFRLFEAAPRADFYHLTGLAESSIRSPLDQALAKGYLLETKQ 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 357 --HWQITEKGKLFLNSLL-ELFL 376


>gi|291302905|ref|YP_003514183.1| oxygen-independent coproporphyrinogen III oxidase [Stackebrandtia
           nassauensis DSM 44728]
 gi|290572125|gb|ADD45090.1| oxygen-independent coproporphyrinogen III oxidase [Stackebrandtia
           nassauensis DSM 44728]
          Length = 406

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 131/396 (33%), Positives = 202/396 (51%), Gaps = 18/396 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQ 64
           ++ +    S+  G+YVH PFC  +C YCDFN++        V +E+F +    E+    +
Sbjct: 19  DSALKSARSHDFGIYVHIPFCASRCGYCDFNTYTAAELGSGVSRESFPRLLEAEIDLAAR 78

Query: 65  LTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G  PR IS+IFFGGGTPSL+    +  I+  +   + ++ + EIT EANP SV+   F
Sbjct: 79  VLGDVPRPISTIFFGGGTPSLLPASELTGIVAKLESTFGLTPDAEITTEANPESVDPEYF 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R  G  R+SLG+QS   + L  L R H    A+ A   AR   F  ++ DLIY  P 
Sbjct: 139 RQLRAGGFTRVSLGMQSTARRVLAVLERGHTPGRALDAAREAREAGFEHVNLDLIYGTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T   +E  L+ A+    DH+S Y L +E GT      + GD+  PS++ A D Y   + 
Sbjct: 199 ETAEDFEASLRAAVDTGADHVSAYSLIVEDGTRLAGQVRRGDIPAPSDDEAADRYLAAER 258

Query: 242 ITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +    G   YE+SN +    A   HNL YWR GD+ G+GPGAHS V      V     KH
Sbjct: 259 VLGEAGFEWYEVSNWARSEAARCRHNLLYWRGGDWWGLGPGAHSHVGG----VRWWNVKH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  + + +         +E L+  Q+  E +++G+RL +G+++   +    RN      R
Sbjct: 315 PARYGQRLTDGLSPAQGRELLTPPQRHMEDVLLGVRLADGLALCALDADGQRN-----AR 369

Query: 361 NLQRQGFIER--VQFSRLRCTQRGMTMLDSVIANLA 394
               +G ++   +   R+R T RG  + D+V+ +L 
Sbjct: 370 KAAAEGLLDPAALAADRVRLTLRGRLLADAVVRDLV 405


>gi|229086888|ref|ZP_04219047.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-44]
 gi|228696398|gb|EEL49224.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-44]
          Length = 379

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +     +++    E+    Q     ++ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVVQYLEYLEKEIINTVQKVPFENMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDLIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG H YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYHQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KEGYESRHNLTYWNNEQYYGFGAGAHSYVNGERIQNVGP----LKQYFSKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++S+++ +E L +GLR  +G+S   ++   G  +D    + L   +  G + + +  
Sbjct: 299 VHEVTSKERMEEELFLGLRKTKGVSKLGFQKKFGVEMDEIFAKQLLQGKEHGLL-QNKDD 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T++G  + + V  +  +
Sbjct: 358 YVCLTRQGKLLGNEVFQSFLI 378


>gi|299822877|ref|ZP_07054763.1| coproporphyrinogen dehydrogenase [Listeria grayi DSM 20601]
 gi|299816406|gb|EFI83644.1| coproporphyrinogen dehydrogenase [Listeria grayi DSM 20601]
          Length = 375

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 186/379 (49%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+ +        I ++F GGG
Sbjct: 3   SVYIHIPFCEHICYYCDFNKVFLEGQ-PVDRYVDLLIREMEMVTGKQELEPIDTVFVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +A +   I +   +  N E + EANP  + +   Q  +  GVNRIS+GVQS
Sbjct: 62  TPTTLNEKQLARLCTAIHRLLPLRENAEFSFEANPGDLSLEKIQVLKDHGVNRISMGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ +GR H   +   ++   R I    +S DLI++LP QT   ++  L +AL   
Sbjct: 122 FNNELLKKIGRIHTTKDVYQSVDNLRKIGLDNVSIDLIFSLPTQTFADFKDTLTQALDLD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L+LP + +  ++Y+   +    HG   YEISN + 
Sbjct: 182 LPHYSAYSLIIEPKTIFYNLMQKGQLILPKQEIEANMYDTLMNEMEKHGRRQYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW    Y G G GAH  +    +     I+K    +++ +      V + 
Sbjct: 242 PGFESRHNIVYWSNEHYYGFGAGAHGYLGEQRYSNFGPIKK----YMEPLENGELPVFQS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
             L  +++ +E + +GLR  +G+S   +    G+NL+      +++   +G +   +  R
Sbjct: 298 RVLPLQEKMEEEMFLGLRKVDGVSKAHFLQKFGQNLNDVFPHAIEKTLAEGLLYENE-ER 356

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T+ G  + ++V     
Sbjct: 357 IALTRDGRFLGNNVFQEFI 375


>gi|120553465|ref|YP_957816.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Marinobacter aquaeolei VT8]
 gi|120323314|gb|ABM17629.1| coproporphyrinogen III oxidase, anaerobic [Marinobacter aquaeolei
           VT8]
          Length = 382

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 132/381 (34%), Positives = 205/381 (53%), Gaps = 14/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + ++ +  ++ + L ++     L   R I ++F G
Sbjct: 12  PLSLYIHVPWCVRKCPYCDFNSHAVKGEIPEHAYLNALLEDLDQDLGLVRERPIETVFIG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       + + + +  T S   EIT+EANP ++E   F+ +R+AG+NR+S+GV
Sbjct: 72  GGTPSLMSGAFYHRLFERLRERLTFSPEAEITLEANPGTLETGRFESFREAGINRLSIGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+ + A +AI  AR   F   + DL++ LP QT +Q   +LQ ALS
Sbjct: 132 QSFDPAQLKTLGRIHDRASAHSAIEAARKAGFDNFNVDLMHGLPDQTPSQALDDLQAALS 191

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y   HLS YQLTIE  T F+         LP ++   ++Y L   +    G+  YE+S  
Sbjct: 192 YQPRHLSWYQLTIEPNTEFFSRPP----ALPDDDRLWEIYQLGGDLLRQAGMDDYEVSAW 247

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           S  GA+S HNLNYW +GDY+ +G G H +V +   R+      + P+++L  +   G   
Sbjct: 248 SLPGAQSRHNLNYWTFGDYLALGAGGHGKVSLADGRILRYWKTRQPDAYLNRI---GSRT 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              E +  E +  EF+M  LRL+ G   + +    G  L         L+ +  I     
Sbjct: 305 AGSEAIEPEDRPLEFMMNALRLKSGTDERLYGEHTGLPLSSIAVKLEQLRNENLIV---P 361

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL+ T +G   L+S++ +  
Sbjct: 362 DRLQATAKGQRYLNSLLEHFL 382


>gi|255323729|ref|ZP_05364857.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium tuberculostearicum SK141]
 gi|255299219|gb|EET78508.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium tuberculostearicum SK141]
          Length = 379

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 16/385 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSI 71
           +   G+Y+H PFC  +C YCDFN++         +    ++ +   E++      G R  
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDRELELAAARVG-RPA 60

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSL+  Q ++ IL+ +   + +    E+T E+NP S     F     AG  
Sbjct: 61  ETVFIGGGTPSLLGGQGLSRILNTVRSTFGLKPGAEVTTESNPESTSPEYFAQLADAGYT 120

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RISLG+QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       
Sbjct: 121 RISLGMQSASPGVLQVLERAHTPGRAFDAAREARAAGFEHVNLDMIYGTPTETDDNVRET 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   + G   
Sbjct: 181 LDRVLETGVDHVSAYSLIVEDGTRMARKVNKGILPAPDEDVLARRYEMISSTLESEGFEW 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN S  G E  HN  YW  G++ G GPGAHS +            KHP  ++  + +
Sbjct: 241 YEVSNWSKPGGECEHNRIYWVDGNWWGAGPGAHSHLGNERFFNV----KHPSRYIDTLGR 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               + E E L+   +  E +M+GLRLREGI     +  A              +G +ER
Sbjct: 297 GELPIKETETLTEADRHMEKIMLGLRLREGIPEAWLDTHA-----APALERFIGRGLLER 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+R T+ G  + D +I +L V
Sbjct: 352 -AGDRVRITKPGRLLADGIITDLLV 375


>gi|52425801|ref|YP_088938.1| coproporphyrinogen III oxidase [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307853|gb|AAU38353.1| HemN protein [Mannheimia succiniciproducens MBEL55E]
          Length = 385

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 134/386 (34%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----RQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + + ++I+  +T++Q      +     R + S
Sbjct: 8   PLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEIDYIRHLVTDLQADLLRFKDSVQNRPLHS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++I  +L  I K    S ++EIT+EANP +VE   FQGY KAGV RI
Sbjct: 68  IFIGGGTPSLFSAESITCLLTEIKKLIDFSPHIEITMEANPGTVEAERFQGYVKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  ++ L+ LGR HNA EA +A+ +A+       + DL++ LP QT  Q   +L+
Sbjct: 128 SMGIQSFNDEKLKALGRIHNAREAKSAVEIAKISGLKSFNLDLMHGLPNQTPEQALDDLR 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T+F         VLP ++   D++     + +  G   YE
Sbjct: 188 QAIALNPPHLSWYQLTIEPNTMFAYRPP----VLPDDDELWDIFERGHRLLTEAGYRQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VAISIEKHPESWLKMVRKN 311
            S ++    +  HNLNYWR+GDY+ +G GAH ++   +   +  S  KHP+ +L+     
Sbjct: 244 TSAYAKPDFQCQHNLNYWRFGDYLAVGCGAHGKMSFVNGDIIRYSKTKHPKGYLR----- 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFI 368
           G  + E+  ++   +  EF M   RL E +   ++    G     +  + +  L++   I
Sbjct: 299 GEYLYEERLINEADRPFEFFMNRFRLLEPVPKTEFVQFTGLPESAVKKQIDWALEKNYII 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E    S  + T+RG   L+ ++    
Sbjct: 359 ET--ESTWQITERGKLFLNELLEVFL 382


>gi|229075991|ref|ZP_04208964.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-18]
 gi|228707103|gb|EEL59303.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock4-18]
          Length = 379

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYSQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q QG +E     
Sbjct: 299 VHEVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQGNQEQGLLEERD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|209694130|ref|YP_002262058.1| coproporphyrinogen III oxidase [Aliivibrio salmonicida LFI1238]
 gi|208008081|emb|CAQ78222.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Aliivibrio salmonicida LFI1238]
          Length = 386

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 209/387 (54%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSI 71
              L +Y+H P+C++KCPYCDFNSH  +  + +  +I + + ++            PR +
Sbjct: 4   PPPLSLYIHIPWCIQKCPYCDFNSHALKTTIPEAQYISALIDDLDTDLARYNMQNEPRKL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI    I  +L  + K    + ++EIT+EANP +VE   F  YR+AGVN
Sbjct: 64  HSIFIGGGTPSLITAPEIKRLLIEVEKRLPFADDIEITMEANPGTVEAGRFIEYREAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+GVQS +++ L  LGR H   EA+ A  LA        + DL++ LP Q++     +
Sbjct: 124 RISIGVQSFQQEKLEKLGRIHGKDEALRAARLAHEAGLNSFNLDLMHGLPNQSIDDALSD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+     HLS YQLTIE  T+FY         LP ++   D++     I +  G   
Sbjct: 184 LKQAIELNPPHLSWYQLTIEPNTVFYYKPP----TLPDDDDLWDIFEQGHQILADAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S +G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L +++
Sbjct: 240 YEISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGRIIRTTKIKHPRGFLDLMK 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
                +++++ ++   ++ EF M   RL E    +D+    G  L+   E     + + +
Sbjct: 300 ---PYLIDEQEVADHDRSFEFFMNRFRLLEACPKQDFIDKTGLGLESIQETMDWAKEKKY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           +E  + +  + T+ G   L+ ++    
Sbjct: 357 LEETE-THWQITEHGKLFLNDLLEAFV 382


>gi|50955096|ref|YP_062384.1| coproporphyrinogen III oxidase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951578|gb|AAT89279.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 413

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 126/398 (31%), Positives = 192/398 (48%), Gaps = 15/398 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQL 65
           +N   G      GVY+H PFC  +C YCDFN++       V Q ++    + E+++  + 
Sbjct: 19  DNAGGGSADRDFGVYLHVPFCRVRCGYCDFNTYTATEVRGVSQTDYADHAVAEVRFAARA 78

Query: 66  TGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            G      R +S++FFGGGTP+L+ P+ +  +L  + + W      E+T EANP SV+  
Sbjct: 79  LGRSGLPARPVSTVFFGGGTPTLLPPEALGRMLGAVREQWGFVPQAEVTTEANPDSVDAA 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +      AG  R+S G+QS   + L  L R H+       +  AR+   ++S DLIY  P
Sbjct: 139 DLLRLAAAGFTRVSFGMQSAVPRVLATLERTHDPERIPLVVQWARDAGLQVSLDLIYGTP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T+  WE  L  ALS   DHLS Y L +E GT   +    G L  P +++  D+Y    
Sbjct: 199 GETLGDWERSLDTALSCVPDHLSAYSLIVEPGTKLARQIAAGQLPEPDDDLQADMYERAD 258

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +  +  G   YE+SN +   G  S HNL YW   D+ GIGPGAHS +      V     K
Sbjct: 259 TRLAGAGYDWYEVSNWAKDDGHRSRHNLAYWLGHDWWGIGPGAHSHIGGDGGGVRWWNVK 318

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + V         +E L +E Q  E +++ +R+REGI+  + E   GR       
Sbjct: 319 HPAAYAQRVLAGQSPAAGRETLGAETQRVERVLLRMRIREGIASAELE-PTGRR----AV 373

Query: 360 RNLQRQGFIERVQ--FSRLRCTQRGMTMLDSVIANLAV 395
             L   G ++        +  + RG  + D+V+  L  
Sbjct: 374 AGLIADGLVDAKAALAGTVTLSLRGRLLADAVVRRLLA 411


>gi|269101810|ref|ZP_06154507.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161708|gb|EEZ40204.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 386

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 138/387 (35%), Positives = 209/387 (54%), Gaps = 16/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSI 71
              L +YVH P+CV+KCPYCDFNSH  + ++ + ++I + L ++           G R +
Sbjct: 4   PPPLSLYVHIPWCVQKCPYCDFNSHALKAEIPELDYIDALLDDLSTDLLAYHLEHGERKL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSLI P+ IA +L GI      S ++EIT+EANP +VE   FQ Y++AGVN
Sbjct: 64  HSIFIGGGTPSLISPEEIARLLQGIEARIPFSDDIEITMEANPGTVEAGRFQAYQQAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS+G+QS +++ L+ LGR H A EAI A  LA        + DL++ LP Q++     +
Sbjct: 124 RISIGIQSFQDEKLKRLGRIHGAQEAITAAKLAAEAGLNSFNIDLMHGLPDQSINDALAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+     HLS YQLTIE  TLFY         LP ++   D++     + +  G   
Sbjct: 184 LAQAIGLNPPHLSWYQLTIEPNTLFYSQPP----TLPDDDDLWDIFEQGHKMLTYAGYVQ 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVR 309
           YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++     R+  +I+ KHP  +L    
Sbjct: 240 YEISGYSKPGKQCQHNLNYWRFGDYLGIGCGSHGKISFDDGRIVRTIKVKHPRGYL---N 296

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGF 367
                + ++  ++++++  EF M   RL E    +D+    G  L            Q +
Sbjct: 297 PEKAYLDQETIVANDERPFEFFMNRFRLLEACPKQDFVARTGLPLTHIQGAIDWALAQNY 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           +     +  + T+ G   L+ ++A   
Sbjct: 357 LTESD-THWQITEHGKLFLNDLLAAFV 382


>gi|196044778|ref|ZP_03112012.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           03BB108]
 gi|225866298|ref|YP_002751676.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           03BB102]
 gi|229186557|ref|ZP_04313718.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BGSC 6E1]
 gi|196024266|gb|EDX62939.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus cereus
           03BB108]
 gi|225787428|gb|ACO27645.1| coproporphyrinogen dehydrogenase [Bacillus cereus 03BB102]
 gi|228596816|gb|EEK54475.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus BGSC 6E1]
          Length = 378

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 178/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   + L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRNELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMERHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEE-SNG 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|320010886|gb|ADW05736.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           flavogriseus ATCC 33331]
          Length = 413

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 189/398 (47%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G  S  LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  
Sbjct: 24  ALEGAASRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLVEEVRQA 83

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV+  
Sbjct: 84  RKVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLAEDAEITTEANPESVDPA 143

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 144 YLAALREGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGT 203

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 204 PGESDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 263

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A G   YE+SN S       LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 264 DEAMAAAGFSWYEVSNWSRTPEGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 319

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + + +       +E L  E +  E +++ LRL EG  +               
Sbjct: 320 KHPGAYAQALAEGRSPGAGREVLGDEDRRVERILLELRLVEGCPLSLLAPAGLAAAARAV 379

Query: 359 ERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
                  G +E   +   R   T RG  + D+V+ +L 
Sbjct: 380 T-----DGLLEPGPYGEGRAVLTLRGRLLADAVVRDLV 412


>gi|157693050|ref|YP_001487512.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032]
 gi|157681808|gb|ABV62952.1| coproporphyrinogen dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 379

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 189/380 (49%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   + ++ +   EMQ   +  G + + +IF GGG
Sbjct: 3   AAYIHIPFCEHICHYCDFNKFFIKTQ-PVDEYLAALEKEMQHTIEQKGEQELKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  +++ I +    S N VE  +EANP  + +      ++AGVNR+S GVQ
Sbjct: 62  TPTSLTVSQLDQLMNSIHRVLKPSKNLVEFAVEANPDELSLEKLHVLKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L+ +GR H   + + +   AR+  F  +S DL++ LP Q        L+ A S 
Sbjct: 122 TFEDDLLKKIGRVHQKKDVLTSFERARDVGFDNISLDLMFGLPHQEKHHVMNSLETAFSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y L       HGLH YEISN++
Sbjct: 182 GAEHYSVYSLIVEPKTVFYNLMQKGKLHLPPQEREAEMYELVMDEMERHGLHQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  V    +  A  +    + +L+++ + G    E
Sbjct: 242 KPGFESQHNLTYWSNEDYFGFGAGAHGYVDGIRNVNAGPV----KHYLELIEQTGFPHKE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFS 374
              ++  +Q +E + +GLR  EG+    ++   G +   L       L+ +G I +    
Sbjct: 298 THQVTKAEQIEEEMFLGLRKIEGVKSAGFQAKYGASPEALFPSVLEELEEKGLIVKDDIG 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R T++G  + + V     
Sbjct: 358 -IRLTRKGKLLGNEVFQAFL 376


>gi|330963814|gb|EGH64074.1| HemN family oxidoreductase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 404

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+K PYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKSPYCDFNSHTASPVLPEQEYVDALLADLDLDLSHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSANALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALDDLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + +  G   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATQGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +    
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHSDGRIIRTWKTRLPKDYL---NPDKPFQ 323

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
              + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G +     
Sbjct: 324 AGAKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHE-DP 382

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           +RL  T +G   L+ ++    +
Sbjct: 383 ARLIATPQGQLFLNDLLQYFLI 404


>gi|255261580|ref|ZP_05340922.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thalassiobium sp. R2A62]
 gi|255103915|gb|EET46589.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thalassiobium sp. R2A62]
          Length = 386

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 174/377 (46%), Positives = 237/377 (62%), Gaps = 5/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNS V + ++ Q  +  +++ E++    LT  R ++S+FFGG
Sbjct: 10  FGLYIHWPFCQAKCPYCDFNSFVSK-EIDQTKWRDAYIVELRRTAALTPNRVLNSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++PQ +  IL  + KNWT+++++EIT+EANP+SVE   F  +R AG+NR+S+G+Q
Sbjct: 69  GTPSLMDPQIVDDILQEVQKNWTIANDIEITLEANPTSVEAGRFADFRAAGINRVSMGIQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL +Q LR LGR H+ SE IAA   ARN F R+SFDLIYA   QT+  W  EL +AL  A
Sbjct: 129 SLNDQDLRKLGRTHSVSEGIAAFETARNEFERVSFDLIYARQGQTLQDWNAELGQALEMA 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VDHLSLYQLTIE GT F      G L  LP+++ A D+Y  TQ +TS HG+ +YE+SNH+
Sbjct: 189 VDHLSLYQLTIEDGTAFGDRFAAGKLRDLPNDDNAADMYFATQELTSKHGMKSYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +G+ES HNL YW  GDYIGIGPGAH R+     R A   E  P +WL  V KNG     
Sbjct: 249 KVGSESRHNLIYWNGGDYIGIGPGAHGRLTNNGIRYATETELSPVAWLSKVAKNGSGQTI 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           ++ ++ + +  E   MGLRL  G+ +    +    N     E +   +  I  V    L 
Sbjct: 309 QDAMTRQDELTERFTMGLRLATGVDLGRLGL---ENHQKSFENSWLAEDQIIEVAQESLI 365

Query: 378 CTQRGMTMLDSVIANLA 394
            T +G  +L++VI  L 
Sbjct: 366 VTAKGRPVLNAVIVELL 382


>gi|126734413|ref|ZP_01750160.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. CCS2]
 gi|126717279|gb|EBA14143.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Roseobacter sp. CCS2]
          Length = 385

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 172/380 (45%), Positives = 239/380 (62%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHV   ++ Q+ +  ++L+E++ + + T  R + S+F
Sbjct: 7   HGGFGLYIHWPFCQAKCPYCDFNSHVV-AQIDQKAWQAAYLSEIERIGEETKGRVLRSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  +  IL  +   W +++++EIT+EANP+SVE   F GYR AGVNR+S+
Sbjct: 66  FGGGTPSLMDPAVVDAILTKVRATWPLANDIEITLEANPTSVEAGRFAGYRDAGVNRVSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  L+ LGR H A EA+ A  +ARN F R+SFDLIYA   Q++  W  EL +AL
Sbjct: 126 GIQALNDADLKALGRLHTAREAMQAFDVARNAFDRVSFDLIYARQGQSLKDWTSELGQAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + AVDHLSLYQLTIE GT F   +  G L  LP ++ A D+Y  TQ +    GL +YE+S
Sbjct: 186 NLAVDHLSLYQLTIEDGTAFGDRYAAGKLRDLPDDDAAADMYMATQEVCGEAGLFSYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+    ES+HN  YW+YGDY GIGPGAH R+ +G  R A      P  WL  V K G+ 
Sbjct: 246 NHARPECESVHNKIYWKYGDYAGIGPGAHGRLTLGGTRYATEASLAPTIWLSQVLKTGNG 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
               E L  + Q  EFL+MG+RLREG+ +  +       +      NLQ  GF+++ Q  
Sbjct: 306 DGNLEALDRQDQFVEFLLMGMRLREGVQLSRFSD-CVTYIFQNNINNLQESGFVQK-QDD 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            LR T +G  +L++V+  L 
Sbjct: 364 VLRVTDQGYPVLNAVLRELL 383


>gi|240949314|ref|ZP_04753657.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
 gi|240296265|gb|EER46914.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
          Length = 385

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 138/390 (35%), Positives = 210/390 (53%), Gaps = 23/390 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEKAYIQHLLADLSQDLTAYKTAIGERKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L  I K       +EIT+EANP + E   F GY + GVNRI
Sbjct: 67  IFIGGGTPSLFSAEGIQYLLAEIQKRIAFEDQIEITLEANPGTAEAERFLGYVQGGVNRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR HN  EAI A+  A+N         + DL++ LP Q+++Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHNREEAIQAVEFAKNAASLGLRSFNLDLMHGLPNQSVSQALS 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A++    HLS YQLTIE  T+FY         LP ++   D++     + ++ G  
Sbjct: 187 DLKQAIALNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTSAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCQHNLNYWRFGDYLAIGCGAHGKITYPTGEIYRFSKTKHPKGYMQ-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQ 365
              G     +E ++ E +  EF M   RL E     D+E L G   ++++    + L++ 
Sbjct: 301 ---GEYRYSQELIALEDRPFEFFMNRFRLLEATPKTDFEQLTGLTLKSIEPIITQALEKN 357

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             IE  Q    + TQ G   L+ ++    V
Sbjct: 358 YIIETEQ--HWQITQHGKLFLNELLEGFLV 385


>gi|254482747|ref|ZP_05095985.1| putative oxygen-independent coproporphyrinogen III oxidase [marine
           gamma proteobacterium HTCC2148]
 gi|214037106|gb|EEB77775.1| putative oxygen-independent coproporphyrinogen III oxidase [marine
           gamma proteobacterium HTCC2148]
          Length = 378

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 132/381 (34%), Positives = 201/381 (52%), Gaps = 14/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C +KCPYCDFNSH     V ++ +I + L ++     +   R I ++F G
Sbjct: 5   PLSLYIHLPWCERKCPYCDFNSH-ESSHVPEQAYITALLQDLDADLAMAAGREIQTLFIG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   + I+ +L GI     ++ + E T+EANP S E + F G+R+AG+NR+SLGV
Sbjct: 64  GGTPSLFSAEAISRLLAGIGDRLELAPDAEATMEANPGSAEADKFLGFRQAGINRLSLGV 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H++ +A AAI  A    F   + DL++ LP QT      +L+ A+S
Sbjct: 124 QSFQDDKLGALGRVHDSKQARAAIEYASAAGFDSFNIDLMHGLPGQTEADAIYDLETAIS 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLS YQLTIE  T+F K        LP E+   D+ +  + +    G   YE+S +
Sbjct: 184 FHPPHLSWYQLTIEPNTVFNKRPP----TLPVEDALADIQDRGELLLENQGYAQYEVSAY 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI-SIEKHPESWLKMVRKNGHAV 315
           S    +  HNLNYW +GDY+ +G GAH ++      +   +  + P+ +L+         
Sbjct: 240 SRPELQCQHNLNYWSFGDYLALGAGAHGKITTADGSIRRYAKTRAPQDYLQ----GERYT 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
             K  L+  +   EF+M  LRL  G S + +E + G + D      ++L  +  +     
Sbjct: 296 ASKRVLNQGELIGEFMMFALRLNNGFSTQRFEQVTGLSADQLRPKVQSLADRELLS-TDG 354

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             +R T  G   LDSVIA   
Sbjct: 355 DNIRATPLGRRFLDSVIAEFL 375


>gi|302551342|ref|ZP_07303684.1| coproporphyrinogen III oxidase [Streptomyces viridochromogenes DSM
           40736]
 gi|302468960|gb|EFL32053.1| coproporphyrinogen III oxidase [Streptomyces viridochromogenes DSM
           40736]
          Length = 429

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 196/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++
Sbjct: 38  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYAETLVEEVR 97

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L++  ++  +L  I   + ++ + E+T EANP SV 
Sbjct: 98  LARKVLGDDPRPVRTVFVGGGTPTLLDAGDLVRMLGAIRDEFGLAPDAEVTTEANPESVG 157

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R+ G NRIS G+QS  +  L+ L R H        +  AR   F  ++ DLIY
Sbjct: 158 PAYLAALREGGFNRISFGMQSARQHVLKVLDRTHTPGRPERCVAEARAAGFEHVNLDLIY 217

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 218 GTPGESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 277

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + + + SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 278 IAEEMLSAAGFEWYEVSNWATSQAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 333

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +         +E LS E +  E +++ LRLREG+ +            +
Sbjct: 334 NVKHPGAYAAALAAGRSPGAGREVLSEEDRRVERILLELRLREGVPLSLLREEG-----L 388

Query: 357 ECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              R    +G +E   +   R   T RG  + D V+ +L 
Sbjct: 389 AASRRALSEGLLETGPYAEGRAVLTLRGRLLADGVVRDLV 428


>gi|257884364|ref|ZP_05664017.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,501]
 gi|294616506|ref|ZP_06696287.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1636]
 gi|257820202|gb|EEV47350.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,501]
 gi|291590654|gb|EFF22382.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1636]
          Length = 388

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 192/386 (49%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     S+ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTASLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEDRVYLTPRGTFLGNNVFERFL 385


>gi|49481357|ref|YP_038372.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332913|gb|AAT63559.1| coproporphyrinogen oxidase (oxygen-independent coproporphyrinogen
           III oxidase) [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 379

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 123 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 183 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMYEMERHGYTQYEISNFS 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 243 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   +       ++    + L   Q QG +E     
Sbjct: 299 VHVVTEKEKMEEELFLGLRKTKGVSKMAFRNKFNVEMNQVFAKQLQNNQEQGLLEESD-G 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 358 YVRLTRKGKLLGNEVFQSFLI 378


>gi|229093387|ref|ZP_04224492.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-42]
 gi|228689981|gb|EEL43784.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus Rock3-42]
          Length = 378

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRLFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KGDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      ++    + L   Q QG +E     
Sbjct: 298 VHVVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMNQVFAKQLQNNQEQGLLEE-SNG 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|315634900|ref|ZP_07890182.1| coproporphyrinogen dehydrogenase [Aggregatibacter segnis ATCC
           33393]
 gi|315476452|gb|EFU67202.1| coproporphyrinogen dehydrogenase [Aggregatibacter segnis ATCC
           33393]
          Length = 389

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 135/383 (35%), Positives = 215/383 (56%), Gaps = 18/383 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISSIF 75
            +Y+H P+CV+KCPYCDFNSH ++  + ++ +++  L ++       ++    RS+ SIF
Sbjct: 15  SLYIHIPWCVQKCPYCDFNSHAQKGSIPEQEYVRHLLADLTADLSRYQESVQQRSLHSIF 74

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL   +NIA +L  I +    + ++EIT+EANP + E   F GY +AGVNRIS+
Sbjct: 75  IGGGTPSLFSAENIAFLLHQIEQRIPFAPHIEITLEANPGTAEAERFLGYVQAGVNRISM 134

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRA 194
           G+QS  ++ L+ LGR HNA+EA +A+  AR    R+ + DL++ LP QT+ +   +L++A
Sbjct: 135 GIQSFSDEKLQKLGRIHNAAEAKSAVGFARVSSLRIFNLDLMHGLPNQTLNEALDDLRQA 194

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A  HLS YQLTIE  T+F          LP ++   D++     + +A G   YE S
Sbjct: 195 IELAPPHLSWYQLTIEPNTMFAYRPP----KLPDDDELWDIFEQGHQLLTAAGYQQYETS 250

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGH 313
            ++  G +  HNLNYWR+GDY+ IG GAH ++   S ++   S  KHP+ +++     G 
Sbjct: 251 AYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLSFPSGKILRYSKTKHPKGYMR-----GE 305

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
            + E+  +S+E +  EF M   RL E +   ++E   G +L    +       Q FI   
Sbjct: 306 YLYEERDVSAEDRPFEFFMNRFRLLEAVPKSEFEQFTGLSLSAVDKTMTWALDQKFITET 365

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             +  + T+ G   L+ ++    
Sbjct: 366 DRT-WQVTEHGKLFLNELLEAFL 387


>gi|293568111|ref|ZP_06679448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1071]
 gi|291589193|gb|EFF21004.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1071]
          Length = 388

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 117/386 (30%), Positives = 191/386 (49%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG    ++V     
Sbjct: 361 VN-EEDRVYLTPRGTFFGNNVFERFL 385


>gi|311031612|ref|ZP_07709702.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13]
          Length = 379

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 115/379 (30%), Positives = 198/379 (52%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   + +++    EM+        + + +IF GGG
Sbjct: 4   SAYIHIPFCEHICHYCDFNKVFLKNQ-PVDAYLEFMDVEMKNTIDRFPTQHLETIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + ++ +L+ I +N+ V  ++E T EANP  + +   +  ++ GVNR+S GVQS
Sbjct: 63  TPTALNQKQLSYLLESIQRNFDVVPDIEYTFEANPGDLSLEKLRLLKEGGVNRLSFGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ +GR+H  ++   +I  AR   F  +S DLIY+LP QT+  ++  L  A S  
Sbjct: 123 FNDDLLKRIGRSHRKTDVFKSIEHAREAGFDNISVDLIYSLPDQTVEDFQDTLHTAFSLG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H S Y L IE  T+FY +   G L LP++     +Y++  +    HG H YEISN + 
Sbjct: 183 LEHYSAYSLIIEPKTVFYNLMSKGKLPLPTQEEETSMYDVLLNEMEKHGYHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y GIG GAHS  +         ++K    ++  + + G    E+
Sbjct: 243 EGYESKHNLTYWDNESYYGIGAGAHSYTEGVRRANHGPLKK----YMDSISETGFPYKEE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             ++ E++ +E + +GLR  +G+S+  +E      +    +  ++   ++G +E+ Q   
Sbjct: 299 HVVTREERIEEEMFLGLRKTQGVSITRFERKFDAEMLNILKGPIEENIQKGLLEQ-QGDF 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +R T++G  + + V     
Sbjct: 358 IRLTKKGKFLGNEVFQAFI 376


>gi|239827778|ref|YP_002950402.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
 gi|239808071|gb|ACS25136.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           WCH70]
          Length = 382

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 199/381 (52%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC + C YCDFN      +   + ++++   EM+W  +      + ++F GGG
Sbjct: 4   SAYFHIPFCAQICYYCDFNKVFFHGQ-PVDEYLEAMENEMKWTVEAFPTDRLDTLFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++E + +   L  I K++  S   VE T EANP+ +     Q  ++AGVNR+S GVQ
Sbjct: 63  TPTVLEMKQLDFFLQSIYKHFRFSIHEVEFTFEANPNELSKEKLQLLKEAGVNRLSFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++  L+ +GR H   + +  I LA+ I F  +S DL+Y LP+QT+ Q++ +L+ A S 
Sbjct: 123 TFDDSLLKAIGRTHRYEDVMKTIALAKEIGFENISIDLMYGLPQQTLAQFQADLEIAFSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IE  T+FY + + G L LP+E     +Y         HG H YEISN++
Sbjct: 183 DIQHISAYSLIIEPKTIFYNLMRKGKLPLPTEEEEAQMYEEAMRQMEIHGYHQYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y GIG GAHS V          I K    +++ V++ G   +E
Sbjct: 243 RPFFESRHNLTYWNNEEYYGIGAGAHSYVGGVRRANIKPINK----YIETVQETGFPYLE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
              ++  +Q +E + +GLR  EG+S + +    G ++     R +  +   G +E  Q +
Sbjct: 299 VHHVTVSEQMEEEMFLGLRKTEGVSKQRFLEKFGMSVHDVFGRAIAAEKQKGLLEETQ-T 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T RG  + + V      
Sbjct: 358 HIRLTHRGKLLGNEVFQAFIA 378


>gi|120404813|ref|YP_954642.1| coproporphyrinogen III oxidase [Mycobacterium vanbaalenii PYR-1]
 gi|119957631|gb|ABM14636.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium
           vanbaalenii PYR-1]
          Length = 394

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 120/387 (31%), Positives = 180/387 (46%), Gaps = 14/387 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG-P 68
             + S   G+YVH PFC  +C YCDFN++      G   + ++ +  TE++      G P
Sbjct: 17  RRRPSQPFGIYVHVPFCAVRCGYCDFNTYTPAELGGANPDGWLSALRTELRLAAAHLGEP 76

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++F GGGTPSL+    +  +LD I +++T++   E+T E+NP S     F G R+A
Sbjct: 77  PDVQTVFVGGGTPSLLGAAGLTAVLDAIREDFTLAPGAEVTTESNPESTSPRFFDGLRRA 136

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS     L  L R H+   A+ A   AR   F  ++ DLIY  P +T    
Sbjct: 137 GYTRVSLGMQSTAPHVLAALDRVHSPGRALDAAREAREAGFDHVNLDLIYGTPGETDDDL 196

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L     +  G
Sbjct: 197 VRSASSAVEAGVDHVSAYALIVEDGTALARRVRRGEMPAPDDDVLARRYELLDRRLADAG 256

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN S  G +  HN+ YW  G++ G GPGAH  V      V     KHP ++   
Sbjct: 257 FDWYEVSNWSRPGGQCRHNIGYWDGGEWWGAGPGAHGYVDS----VRWWNVKHPNAYAAA 312

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
             K    V + E L       E +M+ +RLR G+             +          G 
Sbjct: 313 SDKGELPVADFEALDEPTAHIEDVMLRVRLRTGLPAAALSA-----PERRRAERAVADGL 367

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           + R     L  T RG  + D+V+ +L 
Sbjct: 368 L-RTDGDALVLTDRGRLLADAVVRDLL 393


>gi|315641132|ref|ZP_07896211.1| coproporphyrinogen dehydrogenase [Enterococcus italicus DSM 15952]
 gi|315483140|gb|EFU73657.1| coproporphyrinogen dehydrogenase [Enterococcus italicus DSM 15952]
          Length = 385

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 196/380 (51%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C YCDFN      +   + ++   L E++W        S  +I+ GGG
Sbjct: 8   SMYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDRLLDEIEW-GTKNKTTSFPTIYIGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L GI +  +++   E TIEANP  +        +  GVNR+S+GVQS
Sbjct: 66  TPTSLTATQLDKLLAGITERVSLADTKEFTIEANPGDLTEEKLAIIQNYGVNRVSMGVQS 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H+A +    +HL     F  +S DLIYALP QT+  +   L +AL++ 
Sbjct: 126 FDDRLLKKIGRKHSAQDVTETLHLLEAKGFSNVSIDLIYALPGQTLDNFRQTLTQALTFD 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L +E  T+F    + G++VLPS+ V + ++  T    +  G   YEISN + 
Sbjct: 186 LPHYSLYSLILENKTMFMNWMRKGNMVLPSQEVELQMFEETIDAMTKAGKFQYEISNFAT 245

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GA   V    +R    I    + +LK +R+    + + 
Sbjct: 246 PGYESQHNLMYWDNEEYYGFGAGASGYVDQKRYRNFGPI----QHYLKPLREGTLPIYQS 301

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
           E +  ++Q +E L +GLR   G+S K +E   G++ D    +   +L  +G++       
Sbjct: 302 ESVLRKEQIEEELFLGLRKLAGVSKKAFEKKFGQSFDGIYGDVVTSLVAKGWL-LTDDQH 360

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T++GM + + V     +
Sbjct: 361 VALTKQGMYVGNDVFEQFLL 380


>gi|324998261|ref|ZP_08119373.1| coproporphyrinogen III oxidase, anaerobic [Pseudonocardia sp. P1]
          Length = 395

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 124/388 (31%), Positives = 182/388 (46%), Gaps = 16/388 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGPRS 70
            +   G+YVH PFC  +C YCDFN++      G     E ++++   E+    +  G R+
Sbjct: 9   AAPPFGIYVHVPFCATRCGYCDFNTYTASELAGDASSPEGWLEAARREIALAARTVGDRT 68

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+    ++ ++  I   + V+   E+T E+NP S     F G R  G 
Sbjct: 69  VETVFVGGGTPSLLGADRLSAVMAAIRSEFRVAPGCEVTTESNPESTSPEFFAGIRDGGY 128

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
            R+SLG+QS     L  L R H    A+ A   AR   F  ++ DLIYA P +T      
Sbjct: 129 TRVSLGMQSAARHVLAVLDRTHTPGRAVDAAREARAAGFGHVNLDLIYATPGETDDDLRR 188

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                L   VDH+S Y L +E GT   +  + G+L  P ++VA   Y L  +     GL 
Sbjct: 189 SADAVLEAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDVAATRYELLDARLRDAGLR 248

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN S  GAE  HNL YWR GD+ G+GPGAHS +            KHP  W  ++ 
Sbjct: 249 WYEVSNWSLPGAECRHNLGYWRDGDWWGVGPGAHSHLAGTR----WWNVKHPARWAGLLA 304

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                   +E L+  ++  E +M+ LRL EG+ +   +              L     +E
Sbjct: 305 DGAVPEAGREELTPAERHTESVMLRLRLAEGMPLGLLDDGGRAAASRAAGEGL-----LE 359

Query: 370 RV--QFSRLRCTQRGMTMLDSVIANLAV 395
                  R   T RG  + D V+ +L +
Sbjct: 360 PAAHDAGRAVLTDRGRLLADRVVTDLLL 387


>gi|323702396|ref|ZP_08114061.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532702|gb|EGB22576.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 378

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 215/383 (56%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIF 75
           ++G+Y+H PFC++KC YCDF S++ + +     +I++   E+    QL  P  ++I+SIF
Sbjct: 2   AIGLYIHVPFCIRKCLYCDFTSYLLKQEQ-VALYIKALKGEIILYGQLLAPEHKTIASIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A ILD +A+ +T+    EIT EANP +V +N+ +  ++ G NR+SL
Sbjct: 61  VGGGTPTCLMSRQLADILDQVARYFTIQPGAEITTEANPGTVSLNSLKELKRVGFNRLSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  ++ L  +GR HN  +A  A+  AR   F  ++ DLI+ LP+QT  QW   L + 
Sbjct: 121 GVQSTHQELLNLIGRIHNLDQARQAVDFARQAGFNNLNLDLIFGLPRQTAAQWRQSLSQV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L++  +HLS Y L +E+ T   +  + GDL    E + + +Y  T  + +  G   YEIS
Sbjct: 181 LAWQPEHLSCYGLQLEESTPLARAVERGDLPACPEELELAMYLTTIEVLAEAGYRHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YW    Y+G+GP AHS +         +   H + + ++V +    
Sbjct: 241 NFAKPGYECRHNLIYWHNQQYLGLGPAAHSYINNAR----WANVDHIDKYARLVAQGMQP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
           V E   L+  +Q +E   +GLRL +G+ +K +    GR L     +  ++LQ QG +E +
Sbjct: 297 VEECHRLTPREQMEETAFLGLRLMKGLELKSFAQRFGRELTEVFGDRIKDLQAQGLVE-L 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +   LR T++G+ + + V A   
Sbjct: 356 KDGFLRLTKKGLPVANRVFAAFV 378


>gi|299535785|ref|ZP_07049106.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
 gi|298728985|gb|EFI69539.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
          Length = 381

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 121/382 (31%), Positives = 196/382 (51%), Gaps = 12/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFG 77
           GVY+H PFC + C YCDFN    + +   + +I++   EM     +     R+I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKFYFKNQ-PVDEYIEALGKEMALTTEKHSEKFRNIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P+ +  +L  I     ++S  E T EANP  +     Q     GVNR+S+GV
Sbjct: 63  GGTPTALSPEQLDKLLTSIHTYIPMNSVTEFTSEANPDELSAAKLQVLFDGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ +GR H+       I LAR I F  +S DL+Y LP QTM QW+  L +A +
Sbjct: 123 QSFDQGLLQKIGRTHSNDHVYETIALARKIGFRNISIDLMYGLPGQTMAQWKDSLAKAFT 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L LP+E++  D+Y++     + HGL  YEISN 
Sbjct: 183 LDLPHFSAYSLIVEPKTIFYNQYAKGKLYLPTEDLEADMYDVLMQQMALHGLQQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW   +Y+G G GAH  +    +     ++K    +++ +  N   +V
Sbjct: 243 AKPGYRSEHNKIYWDNDEYVGFGAGAHGYLAGIRYSNHGPLKK----YMEAIEANELPIV 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQF 373
               +S  ++ +E + +GLR  EG+    +E      +        ++L  +G +E+ + 
Sbjct: 299 HAHEVSQVEKREEQMFLGLRKTEGVMHSIYEEKFKTPMSAHYDVVIKDLVSKGLLEQDEL 358

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V     +
Sbjct: 359 G-VRLTRKGRFVGNEVFQQFLL 379


>gi|229006658|ref|ZP_04164292.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock1-4]
 gi|228754519|gb|EEM03930.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           mycoides Rock1-4]
          Length = 378

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 9/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     ++ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFENMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +           GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L+ +GR H   +A  AI  A+   F  ++ DLIYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E     +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEARMYEMVMDEMENHGYKQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KEGYESGHNLTYWNNEQYYGFGAGAHSYVNGERIQNVGP----LKQYFSKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQFSR 375
              ++ +++ +E L +GLR  +G+S   ++   G  +D    + L   ++  + + + + 
Sbjct: 298 VHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMDEIFAKQLLSNKEYGLLQDKGNH 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T++G  + + V  +  +
Sbjct: 358 VCLTRQGKLLGNEVFQSFLI 377


>gi|229157931|ref|ZP_04286004.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 4342]
 gi|228625539|gb|EEK82293.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus ATCC 4342]
          Length = 378

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++ L  +GR H   +A  AI  A+   F  ++ D+IYALP QT+   +  L  A + 
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y L +E  T+FY +   G L LP E+    +Y +       HG   YEISN S
Sbjct: 182 GVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ES HNL YW   +Y G G GAHS V     +         + +   + + G   ++
Sbjct: 242 KDDNESRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
              ++ +++ +E L +GLR  +G+S   ++      +D    + L   Q +G +E     
Sbjct: 298 VHGVTEKEKMEEELFLGLRKTKGVSKIAFQKKFNMEMDQVFAKQLQHNQEKGLLEESD-E 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T++G  + + V  +  +
Sbjct: 357 YVRLTRKGKLLGNEVFQSFLI 377


>gi|15604050|ref|NP_220565.1| coproporphyrinogen III oxidase [Rickettsia prowazekii str. Madrid
           E]
 gi|3860741|emb|CAA14642.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE (hemN)
           [Rickettsia prowazekii]
 gi|292571770|gb|ADE29685.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia prowazekii Rp22]
          Length = 399

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 159/384 (41%), Positives = 238/384 (61%), Gaps = 8/384 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSH+    +    +++S+  E+++ + +   + I SIF
Sbjct: 18  ANDLSIYIHWPFCLSKCPYCDFNSHIVS-TIDYNQWLKSYEKEIEYFKFIIQNKYIKSIF 76

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  + +I++ I     + +  EIT+E NP+S E    + ++ AG+NR+S+
Sbjct: 77  FGGGTPSLMQPLIVEVIINKINNLGIIDNKTEITLETNPTSFETEKLKAFKSAGINRVSI 136

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H++ +AI  I  A  I PR+SFDLIYA   QT+  WE EL++A+
Sbjct: 137 GVQSLKEDDLKKLGRTHDSMQAIKTIEAANTIVPRVSFDLIYARNGQTLKDWEKELKQAM 196

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H++LYQLTIEKGT FYK+ K+G+L+LP+ + A ++Y  T     +     YEISN
Sbjct: 197 YLATSHIALYQLTIEKGTPFYKLFKNGNLILPTSDEAAEMYEWTNHYLESKKYFRYEISN 256

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ LG E LHNL YW Y  Y+GIGPGAHSR+   S+ V AI +  +P  WL  V      
Sbjct: 257 YARLGHECLHNLTYWNYNSYLGIGPGAHSRIIENSNSVLAIMMLHNPAQWLDAVSTKNVG 316

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L++++  +E LMMGLRLR+GI +   E          LDI   ++ Q QG I+ 
Sbjct: 317 IQTHSKLTNKEIIEEILMMGLRLRKGIKISKLEQRLSTALENILDINNLQHYQNQGLIKL 376

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +   +  T +G+ + + ++  L 
Sbjct: 377 DE--HIYLTDKGLMLHNYIVPRLI 398


>gi|294618180|ref|ZP_06697769.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1679]
 gi|291595555|gb|EFF26859.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1679]
          Length = 388

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEDRVYLTPRGTFLGNNVFERFL 385


>gi|289167566|ref|YP_003445835.1| Coproporphyrinogen III oxidase, oxygen-independent
           coproporphyrinogen III oxidase [Streptococcus mitis B6]
 gi|288907133|emb|CBJ21967.1| Coproporphyrinogen III oxidase, oxygen-independent
           coproporphyrinogen III oxidase [Streptococcus mitis B6]
          Length = 376

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSASQLEVLLKGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR  D    E  ++L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRPFDGLYGEIVKDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|330993132|ref|ZP_08317070.1| Radical S-adenosyl methionine domain-containing protein 1
           [Gluconacetobacter sp. SXCC-1]
 gi|329759902|gb|EGG76408.1| Radical S-adenosyl methionine domain-containing protein 1
           [Gluconacetobacter sp. SXCC-1]
          Length = 396

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 173/390 (44%), Positives = 230/390 (58%), Gaps = 11/390 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----- 70
           +  L +YVHWPFC+ KCPYCDFNSHV R  + +  F  +   E+ +     G        
Sbjct: 8   AEPLALYVHWPFCLSKCPYCDFNSHV-RDVIPRARFGAALRRELAFEAARMGDSPAERPR 66

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SIFFGGGTPSL+ P+ +A ++      + ++   EIT+EANP+SVE    + +R AGV
Sbjct: 67  IGSIFFGGGTPSLMAPETVAGLIADARTLFGLTDTAEITLEANPTSVETGLLRAFRDAGV 126

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NRIS+GVQSL+ ++LRFLGR H+A +AIAA+  AR +F R+SFDLIYA P Q    W  E
Sbjct: 127 NRISVGVQSLDAEALRFLGREHDAGQAIAALETARGLFDRISFDLIYARPGQDARAWRAE 186

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ AL+   DHLSLYQLTIE GT F  +++ G   LP  + A  LY LT  + + HGL  
Sbjct: 187 LEAALALVSDHLSLYQLTIEPGTRFEGLYRQGRFRLPDGDDAAQLYELTAEVAARHGLLG 246

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  GAES HNL YWRYGDY+GIGPGAH R+       A    + PE W + V +
Sbjct: 247 YEISNYARPGAESRHNLTYWRYGDYMGIGPGAHGRLTCNGVTSATRRHRAPEPWAERVER 306

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQG 366
            G      E L +  +A E L+MGLRL EGI+   +    G  +    D    R    +G
Sbjct: 307 TGTGAHPDEPLDNRDRAREMLLMGLRLAEGIATPRFARRTGMTITEATDPATMRAAVEEG 366

Query: 367 FIE-RVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++        LR T  G   L+S++A L +
Sbjct: 367 YLVHDTTRQTLRATAEGRLRLESLLAALVL 396


>gi|30248297|ref|NP_840367.1| coproporphyrinogen III oxidase [Nitrosomonas europaea ATCC 19718]
 gi|30138183|emb|CAD84189.1| Coproporphyrinogen III oxidase and related FeS oxidoreductases
           [Nitrosomonas europaea ATCC 19718]
          Length = 399

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 129/385 (33%), Positives = 203/385 (52%), Gaps = 13/385 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            LG+Y+H P+CV+KCPYCDFNSH       + +  ++ +   +++    L   R ++S+F
Sbjct: 19  PLGLYIHLPWCVRKCPYCDFNSHAINSGGDLPESEYVTALKRDLELALPLIWGRPVTSVF 78

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL     I  IL  +     ++  VEIT+EANP ++E   F  +  AG+NR+S+
Sbjct: 79  FGGGTPSLFSATAIDAILSHVRMLLPLAPGVEITLEANPGTLEAQKFTDFHSAGINRLSI 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   + L+ LGR H+ +EA+ A  LA   F  ++ DL+YALP QT  +   +++ A 
Sbjct: 139 GIQSFNSRHLQALGRIHDGAEALRAAELALQHFSNVNLDLMYALPGQTRDEALQDIETAC 198

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  V H+S Y LTIE  T FY+        LP E+ + D+  + + I +  G   YE S 
Sbjct: 199 NRGVAHISAYHLTIEPNTPFYRYPP----QLPDEDTSADMQVMIEHILAERGYRHYETSA 254

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN---- 311
            +  G   LHN+NYW+YGDY+GIG GAHS++      +     KHP  +L+         
Sbjct: 255 FAQPGKPCLHNMNYWQYGDYLGIGAGAHSKISFRDRIIRQMRHKHPRQYLEQAMAGNACL 314

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
            + +  ++ +  + +  EF+M  LRL EG     +    G  +    +     +++G IE
Sbjct: 315 ENLLATEQEVGPQDRIFEFMMNALRLTEGFDPGLFHTRTGLTIASIQKSLAEAEQRGLIE 374

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             Q   +R T  G   L+ ++    
Sbjct: 375 -WQHDCIRPTPEGRRFLNDLLEIFL 398


>gi|157155940|ref|YP_001464308.1| coproporphyrinogen III oxidase [Escherichia coli E24377A]
 gi|157077970|gb|ABV17678.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli E24377A]
          Length = 378

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 205/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVETDRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKHAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|240169937|ref|ZP_04748596.1| coproporphyrinogen III oxidase [Mycobacterium kansasii ATCC 12478]
          Length = 378

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 189/387 (48%), Gaps = 13/387 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           M        G+YVH PFCV +C YCDFN++      G   + ++ +  TE++        
Sbjct: 1   MLRSPGQPFGLYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLLALGTELELAAARLDA 60

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            +++++F GGGTPSL+  + +  +L  +   + ++ + EIT EANP S     F   R A
Sbjct: 61  PTLNTVFVGGGTPSLLGGERLTRLLGMVRDCFALAPDAEITTEANPESTWPEFFDAIRAA 120

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A +  F  ++ DLIY  P ++    
Sbjct: 121 GYTRVSLGMQSVAPRVLATLDRVHSPGRASAAAREAMDAGFEHVNLDLIYGTPGESDDDL 180

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P  +V    Y L  +  +A G
Sbjct: 181 LRSVAAAIDAGVDHVSAYALVVEDGTALARRVRRGELSAPDGDVLAHRYELADARLTAAG 240

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L  YE+SN +  G E  HNL YW  G + G GPGAH  V            KHP ++ ++
Sbjct: 241 LRWYEVSNWARPGGECRHNLGYWDGGQWWGAGPGAHGYVGATR----WWNVKHPNAYAEL 296

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           V      V   E L ++    E +++ +RLR+G+ +   +     + + E  + +   G 
Sbjct: 297 VAGATLPVAGFEQLGADALHTEDVLLKIRLRQGLPMSRLD-----SAERERAKVVLADGL 351

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           +   +  RL  T RG  + D+V+  L 
Sbjct: 352 LA-TEGDRLVLTDRGRLLADAVVRTLL 377


>gi|85712854|ref|ZP_01043896.1| Uncharacterized Fe-S oxidoreductase [Idiomarina baltica OS145]
 gi|85693318|gb|EAQ31274.1| Uncharacterized Fe-S oxidoreductase [Idiomarina baltica OS145]
          Length = 383

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 203/382 (53%), Gaps = 13/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  + ++ +I   L ++         R+I SIF G
Sbjct: 7   PLSLYIHIPWCVEKCPYCDFNSHKIQGSIPEQAYISRLLDDLSADLGGVQGRAIQSIFIG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+I  + I  +LDG+ K  T++S+ EIT+EANP + EV  F G+  AGVNR+S+G+
Sbjct: 67  GGTPSVITAEGIQRLLDGVRKRLTLASDCEITLEANPGTFEVERFAGFINAGVNRLSIGI 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL  + LR LGR H+  +A  A   A  +     + DL++ LP Q+      +L+  ++
Sbjct: 127 QSLNAEHLRTLGRIHDPLQARTAAEHASQLPLKSFNLDLMHGLPGQSAHDALSDLEGVIA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T+F          LP ++    +Y          G   YE+S +
Sbjct: 187 LNPPHISWYQLTIEPNTMFASRPP----QLPDDDTLWAIYQRGHERLLKAGYQQYEVSAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
              G +SLHN NYW +GDY+GIG GAHS++ +         E  KHP+ +L + R   + 
Sbjct: 243 CKPGHQSLHNTNYWEFGDYLGIGCGAHSKITLPEQHKIRRCEKVKHPQGYLDLTRALRY- 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
              +  +  E+++ EF M   RL + +S + +    G  ++         +R+G++E   
Sbjct: 302 --REWDVDPEERSFEFFMNQFRLFQPVSKQQFTDFTGLPIEHGDRALDEAKRKGWVE-SD 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + +Q G   L+ V+  L 
Sbjct: 359 GDHWQLSQLGHRFLNDVLTTLL 380


>gi|319651617|ref|ZP_08005744.1| coproporphyrinogen III oxidase [Bacillus sp. 2_A_57_CT2]
 gi|317396684|gb|EFV77395.1| coproporphyrinogen III oxidase [Bacillus sp. 2_A_57_CT2]
          Length = 377

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +     ++ S   EM    +      + SIF GGG
Sbjct: 4   AAYIHIPFCEHICHYCDFNKVFLKNQ-PVGEYLDSLDKEMNLALKEVPASRLDSIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +   I       S  E T EANP  +     Q    AGVNR+S GVQ+
Sbjct: 63  TPTALNGKQLEKLCGTIKGQLPYDSFTEYTFEANPGDLSEEKLQILHDAGVNRLSFGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ +GR+H A +   +I  A+   F  +S DLIY+LP QT+  ++  L+ + +  
Sbjct: 123 FNDELLKRIGRSHRARDVFQSIEAAKKVGFDNISIDLIYSLPGQTLQDFKDTLETSFTLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L  P E+V  ++Y L       HG   YEISN + 
Sbjct: 183 IAHYSGYSLIIEPKTVFYNLMRKGKLPTPGEDVEAEMYELLMEQMGKHGFAQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW    Y G G GAH  VK         ++K    +++ +      ++E+
Sbjct: 243 PGYESRHNITYWDNEWYFGFGAGAHGYVKGLRRSNHGPLKK----YMEPIENGRLPILEE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFS 374
             +  E+Q +E + +GLR  EG+S+  ++   G++      ++ +++ +++  +   +  
Sbjct: 299 HKVPLEEQMEEEMFLGLRKTEGVSISRFKEKFGKDPLELFKVQIKQHAEKE--LIIAEED 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            ++ T+RG  + + V  +  
Sbjct: 357 HIKLTRRGRFLGNEVFQSFI 376


>gi|293552732|ref|ZP_06673396.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1039]
 gi|291603112|gb|EFF33300.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1039]
          Length = 388

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 117/386 (30%), Positives = 191/386 (49%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+   + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFNNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEDRVYLTPRGTFLGNNVFERFL 385


>gi|260857088|ref|YP_003230979.1| putative oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|260869642|ref|YP_003236044.1| putative oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|257755737|dbj|BAI27239.1| predicted oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|257765998|dbj|BAI37493.1| predicted oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|323154664|gb|EFZ40863.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli EPECa14]
          Length = 378

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 205/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEDKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKSSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|325569967|ref|ZP_08145926.1| coproporphyrinogen dehydrogenase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156934|gb|EGC69103.1| coproporphyrinogen dehydrogenase [Enterococcus casseliflavus ATCC
           12755]
          Length = 415

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 111/391 (28%), Positives = 193/391 (49%), Gaps = 10/391 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N+ + + + ++  Y+H PFC   C YCDFN      +   + +I++ L E++        
Sbjct: 27  NDPSTKSAQNISAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIEALLKEIELTLLRQPL 85

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               +I+ GGGTP+ +    +  +L G+ +     +  E T+EANP  +        +  
Sbjct: 86  NEAKTIYIGGGTPTSLSANQLDRLLSGVHELLPTHTTEEFTVEANPGDLSEEKMLVLKNH 145

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            VNR+S+GVQ+ + + L+ +GR H A +  + I L     F  ++ DLIYALP Q++  +
Sbjct: 146 QVNRLSMGVQTFDNRLLKKIGRKHTAEDVYSTIQLLEKHDFQNVTIDLIYALPGQSIESF 205

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L RA+   + H ++Y L +E  T+F    + G + LPS+     +++   +  +  G
Sbjct: 206 RDTLTRAIDLGLPHYAMYSLILENKTMFMNWVRQGRMALPSQEAETQMFDEAIAAMTKAG 265

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L+ YEISN +  G ESLHNL YW    Y G G GA   +    ++    I    + +LK 
Sbjct: 266 LNQYEISNFARTGYESLHNLVYWNNEHYFGFGAGASGYLGQTRYKNKGPI----QHYLKP 321

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQR 364
           +++N   + E E L++  Q +E L +GLR + GIS   +    G++           L +
Sbjct: 322 LQENQLPIHEIEELTTSNQMEEELFLGLRKKVGISKIQFAEKFGKSFQEIYGSTSEQLIQ 381

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G++   Q  R+  T+ GM + + V     +
Sbjct: 382 KGWLA-SQGDRVFLTKAGMFIGNEVFEAFLL 411


>gi|326333955|ref|ZP_08200185.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nocardioidaceae bacterium Broad-1]
 gi|325948234|gb|EGD40344.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nocardioidaceae bacterium Broad-1]
          Length = 403

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 120/394 (30%), Positives = 197/394 (50%), Gaps = 17/394 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQ 64
            ++++  G   LG YVH PFC  +C YCDFN++        V ++ +      E++  R+
Sbjct: 19  ADSLSTLGEKGLGFYVHVPFCTVRCGYCDFNTYTAVELGEGVSRQTYADQATEEVRLARR 78

Query: 65  LTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G R   + ++FFGGGTP+L+  +++  IL  I   + ++ +VE+T EANP SV+++  
Sbjct: 79  VLGERDKHVDTVFFGGGTPTLLPAKDLTGILRAIKDEFGLADDVEVTTEANPDSVDLDYL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R+ G  R+S G+QS     L  L R H+       +  AR   F ++S DLIY  P 
Sbjct: 139 RALREGGFTRLSFGMQSAVPHVLHTLDRTHDPERVPLVVEWAREAGFEQVSLDLIYGTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +++  W   L  AL+   DH+S Y L +E GT   +  + G+L +P E+   D Y L  +
Sbjct: 199 ESIDDWRTSLDTALASNPDHISAYSLIVEDGTALARRVRRGELEMPDEDDLADKYELADA 258

Query: 242 ITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
               HGL  YE+SN +   ++   HN+ YW+ GD+ G+GPGAHS V            KH
Sbjct: 259 TLRKHGLTWYEVSNWATEESQRCRHNMLYWQGGDWWGVGPGAHSHVGGTR----WWNVKH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P+++   +         +E L+ E +  E +++ LRL +G+     +      L  +  R
Sbjct: 315 PKAYADRIGAKQSPAHAREVLAEEDRRVERVLLELRLADGLPSDALDDGGRAALPEQVRR 374

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L        V    +  T  G  + D+V+ +L 
Sbjct: 375 GLV------TVDGDTIVLTDSGRLLADAVVRDLL 402


>gi|15613906|ref|NP_242209.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
 gi|10173959|dbj|BAB05062.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
          Length = 385

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 118/382 (30%), Positives = 184/382 (48%), Gaps = 10/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
               Y+H PFC   C YCDFN    + +     ++Q+  TEM  +      +S+ +++ G
Sbjct: 2   PKAAYIHIPFCEHICYYCDFNKFYLKNQ-PVNEYLQALETEMAMVVAEQPTKSLQTLYVG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +A +L  I +   +S   E T E NP S++       R  GV+R+S+GV
Sbjct: 61  GGTPTALTADQLAQLLASIKRTLPLSDLEEFTFEVNPDSIDEEKLDVLRSYGVDRLSIGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +   L+ +GR H+      A+  +R   F  +S DL+  LPKQT   +   L+ A +
Sbjct: 121 QAFQPLLLKEIGRTHDQKSVEQAVEKSRQAGFANLSLDLMLGLPKQTPEMFAETLKEAFA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+HLS Y L +E  T+FY   + G L LP E+  V +Y      T  HG   YEISN 
Sbjct: 181 LEVEHLSCYSLKVEAKTVFYNRQRQGRLTLPPEDDEVKMYRQLCYETEKHGFKQYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL YW   +Y G G GAH  V    +     + K    +L+ + +    V 
Sbjct: 241 AKKGYESRHNLVYWNNDEYYGFGAGAHGYVGGVRYMNHGPLPK----YLQAMEEGRRPVF 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQF 373
           E   +S  +Q +E + +GLR R G+  + +    G ++    E+    L  +  +ER   
Sbjct: 297 ESHHVSRVEQMEEQMFLGLRKRSGVEERVFVERFGVSMFSLYEKQIAQLVARCLLERTD- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            R+R T  G+ + + V      
Sbjct: 356 DRVRLTDEGLLLGNEVFEQFLA 377


>gi|269137629|ref|YP_003294329.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|267983289|gb|ACY83118.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|304557694|gb|ADM40358.1| Coproporphyrinogen III oxidase, oxygen-independent [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 212/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++ Q+ ++   L ++         R +S++F G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGEIPQQAYVDHLLADLDQELPRVAGRPLSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++++ EIT+EANP +VE   F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGEALQRLLDGVRARLPLAADAEITLEANPGTVEAERFSAYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EAIAA  LA  +  R  + DL++ LP+Q+  +   +L++A++
Sbjct: 126 QSFSADKLQRLGRIHGPQEAIAAARLATALGLRSFNLDLMHGLPQQSQEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP ++   +++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----RLPDDDALWEIFEQGDRLLRASGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG  AH ++     R+   +  +HP  +++     G+ +
Sbjct: 242 ALPGRQCQHNLNYWRFGDYLGIGCSAHGKLTFADGRIERRAKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            +++ ++  ++  EF M   RL E     D+    G +   +  + E  L  QG+I    
Sbjct: 297 DQRQQVAMAERPFEFFMNRFRLLEPAPRADFSAYTGVDEATIRPQLEAAL-AQGYISET- 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S  + T  G   L+S++  L +
Sbjct: 355 PSHWQVTPHGKLFLNSLL-ELFL 376


>gi|306829774|ref|ZP_07462963.1| coproporphyrinogen dehydrogenase [Streptococcus mitis ATCC 6249]
 gi|304428125|gb|EFM31216.1| coproporphyrinogen dehydrogenase [Streptococcus mitis ATCC 6249]
          Length = 376

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 125/384 (32%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMAQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIITELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLNAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    E  R L +QG + ++
Sbjct: 293 RITEEHLSQTEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRELVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|270292462|ref|ZP_06198673.1| coproporphyrinogen dehydrogenase [Streptococcus sp. M143]
 gi|270278441|gb|EFA24287.1| coproporphyrinogen dehydrogenase [Streptococcus sp. M143]
          Length = 376

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKHSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMDQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLNAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + D+V     +
Sbjct: 352 DGDHVRMTKRGLFLGDTVAERFIL 375


>gi|307701946|ref|ZP_07638955.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus mitis NCTC 12261]
 gi|307616761|gb|EFN95949.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus mitis NCTC 12261]
          Length = 376

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E Q        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFQSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSASQLEVLLKGLTKNLDLSFLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLNAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIVRELVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|171057394|ref|YP_001789743.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
 gi|170774839|gb|ACB32978.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
          Length = 457

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/408 (33%), Positives = 210/408 (51%), Gaps = 34/408 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-------------------------RRYKVGQE 49
               L +Y+H P+C++KCPYCDFNSH                           R  + + 
Sbjct: 56  APPPLSLYIHLPWCLRKCPYCDFNSHEWAPETPAASSPRGGASGLGRPGAGQARGGIPEA 115

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            ++ +   +++    L   R I SIF GGGTPSL  P+ I  +L  +     +  + EIT
Sbjct: 116 RYLDALRADLEAALPLIWGRQILSIFIGGGTPSLFSPEGINRLLSDVRALLPLMPDCEIT 175

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +EANP + E   F+ +R AGVNR+S+GVQS  +  LR LGR H+  +A+AA   A + F 
Sbjct: 176 LEANPGTFERERFRAFRGAGVNRLSIGVQSFNDDHLRALGRVHDRGQALAAAEEAADAFD 235

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
             + DL+YALP Q++ Q   +L+ AL+    HLS+Y LTIE  TLF           P +
Sbjct: 236 TFNLDLMYALPGQSLAQAGEDLRTALALQPPHLSVYHLTIEPNTLFAVRPPVT----PDD 291

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
           + A ++ +    +T A GL  YE+S  +  G    HNLNYW++GDY+GIG GAHS++   
Sbjct: 292 DAASEMLDQIVDLTGATGLERYEVSAFAKPGHRCAHNLNYWQFGDYLGIGAGAHSKLSFP 351

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
              +     + P +++      G AV  +E +  +    EF++  LRLREG +++ +   
Sbjct: 352 HRVLRQVRWREPAAYMTQALA-GQAVSNEEEVGRKALPFEFMLNALRLREGFALELFRER 410

Query: 350 AGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G  L       +  +++G I R  F+++R + RG   L+  +  L +
Sbjct: 411 TGLPLSSIEAALQQAEQRGLITR-DFAQMRPSARGFDFLND-LQELFL 456


>gi|119963409|ref|YP_947979.1| coproporphyrinogen III oxidase [Arthrobacter aurescens TC1]
 gi|119950268|gb|ABM09179.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Arthrobacter aurescens TC1]
          Length = 409

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 124/395 (31%), Positives = 187/395 (47%), Gaps = 20/395 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQ-----WM 62
           + G      G+YVH PFC  +C YCDFN++      G   Q+ +  + ++E+        
Sbjct: 22  LAGVEHRKFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYASTAVSELDFASLALD 81

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                 R +S++FFGGGTP+L+  +++A IL     +W +    E+T EANP SV   + 
Sbjct: 82  ASGLPRRPLSTVFFGGGTPTLLPAEDLARILRAAVGHWGLEPGAEVTTEANPDSVTPESL 141

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +    AG  R+S G+QS     L+ L R H  S     +  AR     +S DLIY  P +
Sbjct: 142 RVLADAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPLVVQWAREAGLAVSLDLIYGTPGE 201

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +M  W++ L+ ALSY  DH+S Y L +E GT      + G++    ++     Y L   +
Sbjct: 202 SMADWQLSLETALSYQPDHISAYALIVEDGTKLAAQIRRGEVPGIDDDDHASKYELADKM 261

Query: 243 TSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            S  GL+ YE+SN S    +   HNL YWR  D+ GIGPGAHS V      V     KHP
Sbjct: 262 ISEAGLNWYEVSNWSRTPEQACRHNLAYWRGDDWWGIGPGAHSHVGG----VRWWNVKHP 317

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            ++   +         +E L  E +  E +M+  RL  G+SV   +      +       
Sbjct: 318 TAYASRLGSGTSPAAGRETLDVETREVERIMLEARLGTGLSVDALDA-----IGRHAMAG 372

Query: 362 LQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
           L     ++ VQ    RL  T +G  + D+V+  + 
Sbjct: 373 LIADELVDPVQAFKGRLVLTLKGRLLADAVVRRIL 407


>gi|284030344|ref|YP_003380275.1| oxygen-independent coproporphyrinogen III oxidase [Kribbella
           flavida DSM 17836]
 gi|283809637|gb|ADB31476.1| oxygen-independent coproporphyrinogen III oxidase [Kribbella
           flavida DSM 17836]
          Length = 401

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 119/392 (30%), Positives = 198/392 (50%), Gaps = 19/392 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT 66
            +   G+   G Y+H P+C  +C YCDFN++      G   Q ++ ++ + E++  R++ 
Sbjct: 21  AVAEAGARPFGFYLHVPYCAFRCGYCDFNTYTATELGGGASQASYAETAVQEVRLARRVL 80

Query: 67  GP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R + ++FFGGGTP+L+  +++  +L  +   + ++++ E+T EANP SV+    + 
Sbjct: 81  PGLERPVDTVFFGGGTPTLLPARDLGRMLAAVRDEFGLAADAEVTTEANPESVDQRYLEE 140

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
             +AG  R+S G+QS     L+ L R H    A+ A+  A    F  ++ DLIY  P +T
Sbjct: 141 LLEAGFTRVSFGMQSASSHVLQILDRRHTPGRALEAVKEATAAGFEHVNLDLIYGTPGET 200

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L+ ALS A DH+S Y L +E GT   +  + G+L +P ++   D Y L   + 
Sbjct: 201 LEDWRTSLESALSAAPDHVSAYALIVEDGTQLARRVRRGELPMPDDDDLADKYVLADDLL 260

Query: 244 SAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +  GL  YE+SN +    A   HN  YWR   + G+GPGAHS V      V     KHP 
Sbjct: 261 TRAGLSWYEVSNWARTEDARCRHNELYWRGDTWWGVGPGAHSHVGG----VRWWNVKHPS 316

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           ++   +         +E L  E +  E +++ +RLR G+ +   +  AGR+         
Sbjct: 317 AYADRMAAGESPAYAREILDEETRRVERVLLEIRLRAGLPLDVLDA-AGRSAVPGL---- 371

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              G ++     RL  T+RG  + D+V+ +L 
Sbjct: 372 --DGLVDERD-GRLVLTRRGRLLADAVVRDLL 400


>gi|237748599|ref|ZP_04579079.1| coproporphyrinogen oxidase [Oxalobacter formigenes OXCC13]
 gi|229379961|gb|EEO30052.1| coproporphyrinogen oxidase [Oxalobacter formigenes OXCC13]
          Length = 401

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 129/374 (34%), Positives = 206/374 (55%), Gaps = 8/374 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CV+KCPYCDF SH +   + +  ++    ++++    L   R +SSIF G
Sbjct: 27  PLSLYIHFPWCVRKCPYCDFYSHEKGSNLPEAEYLDVLRSDLEASLPLVWGRPVSSIFIG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    I  +L  I     V  + EI++EANP + E   F+ YR++G+NR+S+G+
Sbjct: 87  GGTPSLMSADGIDRLLSSIRALLPVLPDAEISMEANPGTFESGKFKSYRESGINRLSIGI 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   + L  LGR H++ EA  AI +A   F  ++ DL+ ALP+QT+ + E ++  ALS+
Sbjct: 147 QSFNARHLHQLGRIHDSDEAKDAIAIAMKYFDNVNLDLMIALPEQTLEELEQDISTALSF 206

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLSLYQLTIE  T F K       VLP+E+V   + N  + +T+  G   YE+S ++
Sbjct: 207 QTQHLSLYQLTIEPNTYFAKRPP----VLPNEDVIERMQNRVEEMTALAGFEHYEVSAYA 262

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HN NYW +GDY+GIG  AHS++ V    +     ++P+ +++   +    V E
Sbjct: 263 KPGHQCWHNKNYWLFGDYLGIGAAAHSKLTVNDEIIRQMRHRNPKLYMEG-DEIKSRVEE 321

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--RNLQRQGFIERVQFSR 375
           +  + S     EF++  LR   G     +    G  L    E     +++G +  +  S 
Sbjct: 322 QFTVQSSDVGFEFMLNALRFTGGFPASLFCERTGLPLSFILEPLEKARKKGLLT-MDSSF 380

Query: 376 LRCTQRGMTMLDSV 389
           +R T+ G   L+ +
Sbjct: 381 IRPTELGKRFLNDL 394


>gi|85708629|ref|ZP_01039695.1| coproporphyrinogen III oxidase [Erythrobacter sp. NAP1]
 gi|85690163|gb|EAQ30166.1| coproporphyrinogen III oxidase [Erythrobacter sp. NAP1]
          Length = 383

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 175/380 (46%), Positives = 238/380 (62%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+HWPFC KKCPYCDFNSHV R  V  + + ++ + +++   +  G   ++SIFFGGG
Sbjct: 4   ALYIHWPFCAKKCPYCDFNSHV-RESVDIDLWERALIADLRAEAREGGYEKLTSIFFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P+ ++ +L+   K W  +  +EIT+EANPSSVE  NF     AG+NR+SLGVQS
Sbjct: 63  TPSLMPPKLVSALLNEAEKLWGFAPEIEITLEANPSSVEAANFAALASAGINRVSLGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L++++LR+LGR H A EAI A+ +A+  F R+SFDLIYALP QT  QWE +L RALS+  
Sbjct: 123 LDDKTLRWLGRLHGAQEAIGALDVAQAHFARVSFDLIYALPDQTAEQWEAQLTRALSFGT 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLYQLTIE GT F    + G       + A +L+ LTQS+TSA GL AYE SNH+  
Sbjct: 183 SHMSLYQLTIEPGTRFETDVRLGRFAPLDNDEAAELFALTQSLTSAAGLPAYETSNHAHP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HNL YWRY DY G+GPGAH R        A    K PE++LK V +  H + E+ 
Sbjct: 243 DDESRHNLTYWRYQDYAGVGPGAHGR----RGGFATVRHKKPENFLKAVNERAHGISEQR 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLA----GRNLDIECERNLQRQGFIERVQFSR 375
            L  ++ A E LMMGLRL EG+ +   E       G  +D    ++L+  G I + +  R
Sbjct: 299 LLDPKEAASEALMMGLRLVEGVDLSALEARFRQDRGEMVDAGKLKHLKDIGLIWQ-EDER 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T  G  +LD+V+ +L  
Sbjct: 358 IGLTDAGRPVLDAVLGDLLA 377


>gi|53802786|ref|YP_115466.1| oxygen-independent coproporphyrinogen III oxidase [Methylococcus
           capsulatus str. Bath]
 gi|53756547|gb|AAU90838.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Methylococcus capsulatus str. Bath]
          Length = 380

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/386 (34%), Positives = 207/386 (53%), Gaps = 17/386 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               LG+YVH P+CV+KCPYCDFNSH     + + ++I + L ++         R + S+
Sbjct: 3   KPPPLGLYVHVPWCVRKCPYCDFNSHRLEGGLPERDYIAALLNDLARDADRVTGRCVESV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+ P+ + L+L+G+     ++S+ EIT+EANP + E   F+G+R+AGVNR+S
Sbjct: 63  FIGGGTPSLLSPEAVDLLLEGVRSRIALASDAEITLEANPGTAETAKFKGFREAGVNRLS 122

Query: 135 LGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS ++  L  LGR H+  +   AA       F   + DL++ LP QT+ Q + +++ 
Sbjct: 123 IGVQSFDDAKLTALGRIHDGRAAVEAAAMAREAGFTNFNLDLMFGLPGQTIAQAKRDVET 182

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLT+E  TLF++        LP  +   D+    Q++ +  G   YEI
Sbjct: 183 AIAQRPTHVSYYQLTLEPNTLFHRSPP----ALPEADAVWDIQRAGQALLADAGYGHYEI 238

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKN 311
           S ++  G    HN+NYWR+GDY+G+G GAH +V          +   +HP  +L+     
Sbjct: 239 SAYARDGFRCRHNVNYWRFGDYLGVGAGAHGKVTDPASGRITRLWKTRHPARYLETQGLG 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFI 368
           G     +  +       EFLM  LRLREG  +  +    G     L+      LQ +G +
Sbjct: 299 G-----EHVVDDASLPFEFLMNQLRLREGFELASFTERTGLTACALEPALSECLQ-EGHL 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           ER     +RC+ RG   LD V+    
Sbjct: 353 ER-HGGVIRCSDRGWNFLDEVLQRFL 377


>gi|237785908|ref|YP_002906613.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758820|gb|ACR18070.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 390

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 128/395 (32%), Positives = 191/395 (48%), Gaps = 19/395 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-------FIQSFLTEMQWMR 63
           M  +  +S GVY+H PFCV +C YCDFN++  R    Q++       ++ +   E+    
Sbjct: 1   MPPEKKDSFGVYIHVPFCVTRCGYCDFNTYTPRELGVQDDAPSPVLQYLDAVERELSRAA 60

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +        ++F GGGTPSL+  + +   L+ +  +  +S   E+T EANP S     F 
Sbjct: 61  ERYHLPPADTVFVGGGTPSLVGAEGLTRALNAVRSSMGLSPGAEVTTEANPESTSPEFFS 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
           G R+AG  R+SLG+QS  E+ LR L R H     +AA   AR   F  ++ DLIY  P +
Sbjct: 121 GLREAGFTRVSLGMQSASEKVLRVLDRRHTPGRPVAAAQEARRAGFEHVNLDLIYGTPGE 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                +  +   LS  VDH+S Y L IE+GT  ++  + G+L+   E+     Y++    
Sbjct: 181 VDDDVKRSVDAVLSADVDHVSAYSLIIERGTAMFRKVRHGELIETDEDTLARRYDIIDDA 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            S  G   YE+SN S  G E  HNL YWR GD+ G GPGAH  +            KHP 
Sbjct: 241 LSGQGFSWYEVSNWSRQGGECRHNLVYWRDGDWWGAGPGAHGHIGNQRFVNV----KHPA 296

Query: 303 SWLKMV--RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            +  M+   ++  A+   E LS  ++ +E +M+ LRL EGI                C +
Sbjct: 297 RYSAMISGSEDALALKGVEDLSPSERHEERVMLALRLAEGIEESQLPEST-----TSCVQ 351

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                G + R    R+  T RG  + D +I ++ V
Sbjct: 352 RFIDDGLLWRPSSGRVAVTNRGRLLADGIITDILV 386


>gi|296130055|ref|YP_003637305.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           flavigena DSM 20109]
 gi|296021870|gb|ADG75106.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           flavigena DSM 20109]
          Length = 412

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 128/402 (31%), Positives = 191/402 (47%), Gaps = 24/402 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ------- 60
            +   G    + GVY+H PFC  +C YCDFN++      G  +      T +        
Sbjct: 19  ASAAHGADGRAFGVYLHVPFCAVRCGYCDFNTYTATELGGGASLASYARTALGEVALADR 78

Query: 61  -WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              R     R +S++F GGGTP+L+   ++  +LDG+   W +++  E+T EANP SV  
Sbjct: 79  VLRRAGVPARPVSTVFVGGGTPTLLPVDDLVRLLDGVRTTWGIAAGAEVTTEANPDSVTP 138

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                   AGV R+S G+QS     LR L R H+ +     +  AR+   R+S DLIY  
Sbjct: 139 EGLARLAAAGVTRVSFGMQSAVPHVLRTLDRTHDPARVPDVVRWARDAGLRVSLDLIYGT 198

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +++  W + ++ AL   VDH+S Y L +E GT      + G+L LP E+     Y L 
Sbjct: 199 PGESLDDWRLSVETALMTGVDHVSAYALVVEPGTRMAVQVRRGELTLPDEDDQATKYELA 258

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             + SA GLH YE+SN +      S HNL YWR  D+ G+GPGAHS V      V     
Sbjct: 259 DDLLSAAGLHWYEVSNWARTPDDASRHNLGYWRGDDWWGVGPGAHSHVGG----VRWWNV 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   +         +E ++    A E +M+G+R+ EG+ + D    AG       
Sbjct: 315 KHPRAYADRLAAGRSPAAGREVVTGGTAALERVMLGVRIAEGLPLADV--PAGSR---PA 369

Query: 359 ERNLQRQGFIE------RVQFSRLRCTQRGMTMLDSVIANLA 394
              L   G ++           R+  T+RG  + D+V+  L 
Sbjct: 370 VAGLVADGLVDGPAALGADGPRRVVLTRRGRLLADAVVRALV 411


>gi|52081099|ref|YP_079890.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52786477|ref|YP_092306.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|319644944|ref|ZP_07999177.1| HemN protein [Bacillus sp. BT1B_CT2]
 gi|52004310|gb|AAU24252.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52348979|gb|AAU41613.1| HemN [Bacillus licheniformis ATCC 14580]
 gi|317392753|gb|EFV73547.1| HemN protein [Bacillus sp. BT1B_CT2]
          Length = 379

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 114/380 (30%), Positives = 188/380 (49%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   + +++S   EM    + TG   + +IF GGG
Sbjct: 3   AAYIHIPFCEHICHYCDFNKFFIQSQ-PVDEYLRSLEKEMANSMEATGHPELKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +    +  +LD I +    S +  E  +EANP  +        + AGV+R+S GVQ
Sbjct: 62  TPTSLSAAQLERLLDSIHRVLKPSESLAEFAVEANPDDLSAEKLDVLKAAGVDRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E++ L+ +GR H   + + +   AR   F  +S DL++ LP QT+      L  AL+ 
Sbjct: 122 TFEDELLKKIGRVHEQKDVLVSFERARKAGFDNISLDLMFGLPGQTIGHLASSLDTALAL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + K G L LP ++   ++Y L        G+  YEISN++
Sbjct: 182 GAEHYSVYSLIVEPKTVFYNLMKKGRLHLPPQDQEAEMYELVMRKMEEAGIGQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   DY G G GAH  +       A  +    + ++ ++ ++G    E
Sbjct: 242 KKGYESKHNLTYWNNEDYFGFGAGAHGYINGERTVNAGPV----KHYIDLIEQSGFPYKE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
           K  ++  +Q +E + +GLR  EG++ + +    GR++D    +   +L+  G I     +
Sbjct: 298 KHMVTKNEQIEEEMFLGLRKTEGVNKERFFETYGRSVDDLFPKVLHSLEETGLIVNTNKN 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T  G  + + V     
Sbjct: 358 -VFLTHNGKLLGNEVFQAFL 376


>gi|307709061|ref|ZP_07645520.1| coproporphyrinogen III oxidase [Streptococcus mitis SK564]
 gi|307620007|gb|EFN99124.1| coproporphyrinogen III oxidase [Streptococcus mitis SK564]
          Length = 376

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 206/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + +++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDIYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L G+ KN  +S+  E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSASQLEVLLKGLTKNLDLSALEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLVKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAALERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  ++L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMVRFEEKFGRSFDGLYGEIVKDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +  R+R T+RG+ + D+V     +
Sbjct: 352 EGDRVRMTKRGLFLGDTVAERFIL 375


>gi|260429507|ref|ZP_05783484.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citreicella sp. SE45]
 gi|260420130|gb|EEX13383.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Citreicella sp. SE45]
          Length = 383

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 164/380 (43%), Positives = 227/380 (59%), Gaps = 4/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+YVHWPFC  KCPYCDFNSHV    V Q  + ++ + E+     LT  R + SI+
Sbjct: 7   DGGFGLYVHWPFCEAKCPYCDFNSHVT-AHVDQTRWAEALVRELARYGALTEGRMLRSIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P+ +  +L     +W  ++++EIT+EANP SVE+  F+G+   GVNR+SL
Sbjct: 66  FGGGTPSLMQPETVGAVLRASRDHWAWANDIEITLEANPRSVEIRKFEGFAGVGVNRVSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+L    LR LGR H   EA++A+ +AR+ F R+SFDLIY    Q++  WE EL+ AL
Sbjct: 126 GVQALRPDDLRRLGRLHGVDEALSALDIARSTFSRVSFDLIYGRQGQSLAAWETELREAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             A DHLSLYQLTIE+GT F++  + G L  LP+E++  D+Y  TQ I  A G  AYE+S
Sbjct: 186 DLAGDHLSLYQLTIEEGTAFWERAQAGGLKGLPNEDLGADMYLATQDICGAAGFEAYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+   A S HNL YWR GDY+GIGPGAH RV +   R A    + P  W+      G  
Sbjct: 246 NHAQRDAMSRHNLVYWRGGDYVGIGPGAHGRVTLNGVRHASVARRLPGPWIAAAEA-GSG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
                 L+ E    E++MMG+RL EG+ ++    + G   +       Q  G I R   +
Sbjct: 305 DESLLPLTGEDVWAEYIMMGMRLSEGLDLERAREIGGTRFEEMPLEKFQDLGLIWR-DAT 363

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R   T +G  +L+++ + L 
Sbjct: 364 RFGATLQGRMVLNTLTSELL 383


>gi|149376951|ref|ZP_01894705.1| coproporphyrinogen III oxidase [Marinobacter algicola DG893]
 gi|149358728|gb|EDM47198.1| coproporphyrinogen III oxidase [Marinobacter algicola DG893]
          Length = 386

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 127/390 (32%), Positives = 199/390 (51%), Gaps = 14/390 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           ++        L +YVH P+CVKKCPYCDFNSH     + +  ++ + + ++         
Sbjct: 7   DDTAVSALPPLSLYVHVPWCVKKCPYCDFNSHALTGDIPENGYLDAIMEDLSGDLAFIQG 66

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R I ++F GGGTPSL+ P     + D +  + + + + EIT+EANP +VE   F G+R A
Sbjct: 67  RPIQTVFIGGGTPSLMSPDFYNTLFDRLRTHLSFTDDAEITLEANPGTVEQARFNGFRGA 126

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+SLG+QS     L+ LGR H+   A  AI  ARN  F   + DL++ LP QT    
Sbjct: 127 GINRLSLGIQSFNPLRLKALGRIHDDKSAHRAIEAARNAGFDNFNLDLMHGLPDQTPADA 186

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +LQ A+S+   HLS YQLT+E  T FY         LP ++   ++Y+         G
Sbjct: 187 LDDLQAAMSWQPPHLSWYQLTLEPNTEFYSRPP----QLPDDDHLWEIYSQGADYLHQQG 242

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLK 306
              YE+S  S  G  S HNLNYW +GDY+ +G GAH ++   +  +      + P++++ 
Sbjct: 243 FTDYEVSAWSRPGMASRHNLNYWMFGDYLALGAGAHGKITFRNGDIRRFWKTRQPDAYMN 302

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQR 364
            +   G      + +  E++  EFLM  LRL  G+    +    G  L     +   L++
Sbjct: 303 RI---GSRTAGSQMVELEERPLEFLMNALRLTSGVPENLFTERTGLPLSRVAVKLEELRK 359

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  +E     R++ T+ G   L+S++    
Sbjct: 360 ENMLE---PGRIQTTELGQRYLNSLLERFL 386


>gi|69249348|ref|ZP_00604944.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium DO]
 gi|257882925|ref|ZP_05662578.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,502]
 gi|257889296|ref|ZP_05668949.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,410]
 gi|258615970|ref|ZP_05713740.1| coproporphyrinogen III oxidase [Enterococcus faecium DO]
 gi|260560093|ref|ZP_05832271.1| coproporphyrinogen III oxidase [Enterococcus faecium C68]
 gi|261207419|ref|ZP_05922105.1| coproporphyrinogen III oxidase [Enterococcus faecium TC 6]
 gi|289566481|ref|ZP_06446906.1| oxygen-independent coproporphyrinogen III oxidase [Enterococcus
           faecium D344SRF]
 gi|293560178|ref|ZP_06676680.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1162]
 gi|294621558|ref|ZP_06700724.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium U0317]
 gi|314939967|ref|ZP_07847167.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a04]
 gi|314942576|ref|ZP_07849410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133C]
 gi|314947475|ref|ZP_07850890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0082]
 gi|314952498|ref|ZP_07855499.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133A]
 gi|314992405|ref|ZP_07857831.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133B]
 gi|314996245|ref|ZP_07861304.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a01]
 gi|68194198|gb|EAN08726.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium DO]
 gi|257818583|gb|EEV45911.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,502]
 gi|257825656|gb|EEV52282.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,410]
 gi|260073928|gb|EEW62252.1| coproporphyrinogen III oxidase [Enterococcus faecium C68]
 gi|260078310|gb|EEW66015.1| coproporphyrinogen III oxidase [Enterococcus faecium TC 6]
 gi|289161746|gb|EFD09621.1| oxygen-independent coproporphyrinogen III oxidase [Enterococcus
           faecium D344SRF]
 gi|291598863|gb|EFF29914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium U0317]
 gi|291605850|gb|EFF35282.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E1162]
 gi|313589567|gb|EFR68412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a01]
 gi|313593040|gb|EFR71885.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133B]
 gi|313595404|gb|EFR74249.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133A]
 gi|313598680|gb|EFR77525.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133C]
 gi|313640801|gb|EFS05381.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0133a04]
 gi|313646025|gb|EFS10605.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium TX0082]
          Length = 388

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMKIMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYLDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEDRVYLTPRGTFLGNNVFERFL 385


>gi|114330337|ref|YP_746559.1| coproporphyrinogen III oxidase [Nitrosomonas eutropha C91]
 gi|114307351|gb|ABI58594.1| coproporphyrinogen III oxidase, anaerobic [Nitrosomonas eutropha
           C91]
          Length = 411

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 200/385 (51%), Gaps = 13/385 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            LG+Y+H P+CV+KCPYCDFNSH       + +  ++ +   +++        R ++S+F
Sbjct: 23  PLGLYIHLPWCVRKCPYCDFNSHAIDPNSALPEAEYVAALKRDLELSLPQIWGRPVTSVF 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL    +I  IL       + +   EIT+EANP ++E   F  +R AG+NR+S+
Sbjct: 83  LGGGTPSLFSGASIDAILSYARMLLSFAPETEITLEANPGTLEAQKFADFRSAGINRLSI 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS     L+ LGR HN +EA  A+  A   F  ++ DL+YALP QT  +   +++ A 
Sbjct: 143 GIQSFNPGHLQALGRIHNDAEASRAVEQALQHFSNINLDLMYALPNQTQDEALQDIEAAC 202

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            + V H+S Y LT+E  TLFY+        LP E+ + D+  + + + +  G   YE S 
Sbjct: 203 GWGVPHISAYHLTLEPNTLFYRQPP----KLPDEDTSADMQIMIERVLAEKGYQHYETSA 258

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN---- 311
            +  G   +HN+NYW+YGDY+GIG GAHS++      +     KHP  +L+         
Sbjct: 259 FAQPGRMCVHNMNYWQYGDYLGIGAGAHSKISFREKIIRQMRHKHPRHYLEQAAARNTNL 318

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
            + +  ++ +  + +  EF+M  LRL +G     +    G  +    +     +++G IE
Sbjct: 319 ENMLATEQEVGPQDRIFEFMMNALRLTDGFDPGLFHTRTGLTVASIQQQLTTAEQRGLIE 378

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             Q   +R T  G   L+ ++    
Sbjct: 379 -WQHDCIRPTADGRRFLNDLLEIFL 402


>gi|119716130|ref|YP_923095.1| coproporphyrinogen III oxidase [Nocardioides sp. JS614]
 gi|119536791|gb|ABL81408.1| coproporphyrinogen III oxidase, anaerobic [Nocardioides sp. JS614]
          Length = 426

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 125/403 (31%), Positives = 206/403 (51%), Gaps = 22/403 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--------QENFIQSFLTEM 59
            + +   G    G YVH PFC  +C YCDFN++               +  + ++ + E+
Sbjct: 29  ASALARVGERGFGFYVHVPFCTVRCGYCDFNTYTAEELGPAGGAPGASRATYAEAAIAEV 88

Query: 60  QWMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +  RQ+ G     ++++FFGGGTP+L+ P ++  +L  I   + ++ +VE+T EANP SV
Sbjct: 89  RRARQVLGDTDLPVNTVFFGGGTPTLLGPADLGAVLAAIGAEFGLADDVEVTTEANPDSV 148

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
            + + +  R AG  R+S G+QS  +  LR L R H+     A +  AR   F ++S DLI
Sbjct: 149 ALWDLEELRAAGFTRLSFGMQSAVDHVLRVLDRTHDPLRVPAVVDWARQAGFEQISLDLI 208

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P +++  W++ ++ AL+   +H+S Y L +E+GT   +  K G+L +P E+   D Y
Sbjct: 209 YGTPGESVADWDVSVEAALACGPEHVSAYSLIVEEGTALARRVKRGELPMPDEDDLADKY 268

Query: 237 NLTQSITSAHGLHAYEISNHSF-----LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
            L     +A GL  YE+SN +        +   HNL YW  GD+ G+GPGAHS V     
Sbjct: 269 LLVDDRLAAAGLEWYEVSNWARGRDDNTASRCRHNLLYWTGGDWWGVGPGAHSHVGG--- 325

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            V     KHP ++ + +         +E L  E +  E +++ LRLR+G+ V+  +    
Sbjct: 326 -VRWWNVKHPAAYAERIAAGRSPAHAREVLDEESRRVERVLLELRLRDGLPVEVLDESGR 384

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +     R+L  +  +      RL  T+RG  + D+V+ +L 
Sbjct: 385 AAVPDLVARDLITE--LATDDGHRLVPTRRGRLLADAVVRDLL 425


>gi|172056816|ref|YP_001813276.1| coproporphyrinogen III oxidase [Exiguobacterium sibiricum 255-15]
 gi|171989337|gb|ACB60259.1| oxygen-independent coproporphyrinogen III oxidase [Exiguobacterium
           sibiricum 255-15]
          Length = 381

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 189/383 (49%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
                YVH PFC   C YCDFN    + +     ++ +   E++   Q      + +IF 
Sbjct: 2   TPRAAYVHIPFCEHICYYCDFNKVFLKNQ-PVAEYLDALEREIELTLQHYPTDRLETIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ +    +  ++D I+K+      + +E T+E+NP  V        +  GVNR+S
Sbjct: 61  GGGTPTALNEAQMQRLMDIISKHLLPLTDATLEYTVESNPDGVSPEKLDIMKAGGVNRVS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
            GVQS ++  L  +GR H  ++    +  A   F  +S DL++ LP QT+ Q   +++RA
Sbjct: 121 FGVQSFDDGLLERIGRTHREAKVAETLDHAAKRFDNISVDLMFGLPNQTLEQVRYDVKRA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   + H+S Y L +E  T+F    + G L LP++++  D+Y L      A GLH YEIS
Sbjct: 181 LHLPITHISSYSLILEPHTVFAIQERKGKLPLPTQDLEADMYRLMIETIEAGGLHQYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HN  YW   +Y G G G+HS +          I  +       ++  G  
Sbjct: 241 NFSLPGRESRHNRVYWENDEYYGFGAGSHSYINKTRRANIAPIPHY-------IKAEGLP 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
           V  +  L+  ++ +E + +GLR++EG+S + +E   G +LD    +    L  +G +ER 
Sbjct: 294 VRNETPLTEVERMEEEMFLGLRMKEGVSERHFEEKYGHSLDRVFGQTIAKLLPRGLVERT 353

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             + LR T  G+ + + V A   
Sbjct: 354 A-THLRLTDAGVPLANEVFAEFI 375


>gi|297571551|ref|YP_003697325.1| oxygen-independent coproporphyrinogen III oxidase [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296931898|gb|ADH92706.1| oxygen-independent coproporphyrinogen III oxidase [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 394

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 184/386 (47%), Gaps = 20/386 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLT---GPR 69
           ++  G YVH PFC  +C YCDFN++            ++ +S   E++         G  
Sbjct: 20  TSGFGAYVHIPFCRVRCGYCDFNTYTNTDFGPGAKVSDYQESVAREIELSSHQLIAGGDP 79

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S++SIFFGGGTP+++    +  IL  + + + V +  EIT EANP SV  +  +  +  G
Sbjct: 80  SLTSIFFGGGTPTMLNATQLVAILRKLRETFGVVNGAEITTEANPESVNRDALETLKNGG 139

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S G+QS     L  L R H   +       AR +    S DLIY  P +++  W+ 
Sbjct: 140 FTRVSFGMQSAVSHVLDTLERQHTPGQVREVTRWARQVGLDYSVDLIYGAPGESLDDWQR 199

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  A++    H+S Y LTIE GT   +  + G+L     +     Y + +   +  G  
Sbjct: 200 SLDAAIALEPGHISAYGLTIEPGTAMGRKVRKGELPETDPDEMATKYEMAEVALNEAGYF 259

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN +  G ES HNL YWR  ++ G GPGAHS +            KHP ++ K + 
Sbjct: 260 WYEVSNWAKPGKESRHNLAYWRNTNWWGYGPGAHSHINGSR----FWNVKHPGAYAKHLA 315

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  E E L+  ++ +E +M+G+R+ EGI+V D        ++      L   G IE
Sbjct: 316 AGMIPAAEIEHLTDAERREEAIMLGVRVAEGIAVPD--------VEPHVVAGLISDGLIE 367

Query: 370 RVQF--SRLRCTQRGMTMLDSVIANL 393
             +    R+  T RG  + D+VI  L
Sbjct: 368 PGEALRGRIVLTLRGRLLADTVIRAL 393


>gi|74316497|ref|YP_314237.1| coproporphyrinogen III oxidase [Thiobacillus denitrificans ATCC
           25259]
 gi|74055992|gb|AAZ96432.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thiobacillus denitrificans ATCC 25259]
          Length = 392

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 204/382 (53%), Gaps = 9/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +Y+H P+CVKKCPYCDFNSH     + +  ++ +   +++        R I ++F
Sbjct: 16  PPPLSLYIHLPWCVKKCPYCDFNSHAA-EGIPEAAYVDALRADLEHALPDIWGRKIHTVF 74

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL   + I  IL  +     +    EIT+EANP ++E   F G+R+AG+ R+SL
Sbjct: 75  FGGGTPSLFSAEGIDRILATVRTLTPLVPGAEITLEANPGTIEAAKFAGFREAGITRVSL 134

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS + + L+ LGR H+ +EA  A  LA   F   + DL+YALP QT+ +   ++  AL
Sbjct: 135 GIQSFDPRHLKALGRIHDGTEARRAAELAATHFDTFNLDLMYALPGQTLAEALADVDAAL 194

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLS Y LT+E  T F          LP +++A D+     +     G+  YE S 
Sbjct: 195 AFQPPHLSAYHLTLEPNTPFG---HAAPPNLPDDDLAADMQLAIGARLIDAGMQHYETSA 251

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G    HNLNYW++GDY+GIG GAHS++      V     KHP+ ++  V    H V
Sbjct: 252 YAKPGHAGRHNLNYWQFGDYLGIGAGAHSKLSFHDRIVRQMRTKHPQQYMTAVHGGAH-V 310

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
            +   L+      EF+M  LRL EG+  + +E+  G  L++        + +G +  V+ 
Sbjct: 311 ADTRALTRNDLPFEFMMNALRLTEGVPAELFELRTGLPLNVCAAALAQARAKGLLG-VEL 369

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            RL  T +G   L+ ++  L +
Sbjct: 370 GRLEPTLQGQRFLNDLL-ELFL 390


>gi|322375510|ref|ZP_08050023.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C300]
 gi|321279773|gb|EFX56813.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. C300]
          Length = 376

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 127/384 (33%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E          + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFHSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + L+LDG++KN  +S   E+TIEANP  ++ +     +++ VNR+SL
Sbjct: 58  IGGGTPTALSAPQLELLLDGLSKNLDLSVLEELTIEANPGDLDADKIAVLKQSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNKMLKKIGRSHLEKDIYDNIDRLKLAGFDNISIDLIYALPGQTMAQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    +R    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYRNHGPI----RHYLNAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG + ++
Sbjct: 293 RITEEHLSQREQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|307547057|ref|YP_003899536.1| coproporphyrinogen III oxidase [Halomonas elongata DSM 2581]
 gi|307219081|emb|CBV44351.1| coproporphyrinogen III oxidase [Halomonas elongata DSM 2581]
          Length = 391

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 138/383 (36%), Positives = 217/383 (56%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+CV+KCPYCDFNSH   R  ++ +E ++ + + ++     L   R I S+F
Sbjct: 7   PLALYVHVPWCVRKCPYCDFNSHGVGRGAELPEEEYLAALIEDLDADLPLAAGREIVSVF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+       +L+ +     ++S++EIT+EANP ++E   F GYR+AG+NR+SL
Sbjct: 67  IGGGTPSLMSASFYLRLLEALQARLPLASDIEITLEANPGTLERGRFAGYREAGINRLSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS ++  L  LGR H+  +A AAI  AR+  F  ++ DL++ LP Q++     +L RA
Sbjct: 127 GVQSFQDDQLAALGRIHSGGDAGAAIAEARHAGFDNLNIDLMHGLPGQSVELALADLDRA 186

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ + +HLS YQLT+E  T F+         LP E V  D+ ++      A GL  YEIS
Sbjct: 187 LALSPEHLSWYQLTLEPNTEFHSRPP----TLPEEEVLWDIQDMGHERLEAEGLERYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRK 310
            ++  G  + HNLNYWR+GDY+GIG GAH ++      G         + PE++L+    
Sbjct: 243 AYARPGLGARHNLNYWRFGDYLGIGAGAHGKLSARAGDGLTIERRWKARQPEAYLRRRHD 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFI 368
               V  +  +++++   EF M  LRL +G+S+  W   +G   ++   R    + +G +
Sbjct: 303 PRGFVAGRAAVTADELPLEFAMNALRLVDGVSMATWSAHSGYPQEVMTSRLTRAREKGLL 362

Query: 369 ERVQFSRLRCTQRGMTMLDSVIA 391
                 RL+ + RG+  L+ ++A
Sbjct: 363 VE-DPERLQASPRGLLFLNELLA 384


>gi|227548786|ref|ZP_03978835.1| coproporphyrinogen dehydrogenase [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227079116|gb|EEI17079.1| coproporphyrinogen dehydrogenase [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 367

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 119/379 (31%), Positives = 188/379 (49%), Gaps = 17/379 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            G+Y+H PFC  +C YCDFN++     +   E ++++  TE+             ++F G
Sbjct: 2   FGLYIHVPFCATRCGYCDFNTYTPTEVETSHETYLRALETELAKA----DTSPADTVFIG 57

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  I++ +  +  +    E+T E+NP S     F+G  +AG  R+SLG+
Sbjct: 58  GGTPSLLGAAGLGRIMEMVHTHVGLKPGAEVTTESNPESTSPEYFEGLLEAGFTRVSLGM 117

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ L R H    A+AA+  A +  F  ++ D+IY  P +T       L   LS
Sbjct: 118 QSASTPVLKVLDRMHTPGRAVAAVKEALDAGFEHVNLDMIYGTPTETDDDVRATLDAVLS 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VDH+S Y L +E GT   +  + G+L  PSE+V  D Y +  S     G   YE+SN 
Sbjct: 178 TGVDHVSAYSLIVEDGTAMARKVRRGELPAPSEDVYADRYEIISSTLEDAGFGWYEVSNW 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +  HNL YWR G + G GPGAHS +            K PE + +++      + 
Sbjct: 238 AREGGQCRHNLLYWRGGQWWGAGPGAHSFIGSTRFHNV----KRPERYSELLAGGSLPIA 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           ++E L++++Q  E +M+GLRL+EGI  +  +  A   +D        R G +      R+
Sbjct: 294 DQESLTAQEQHFEAIMLGLRLKEGIPREWIDESAWGVVDKHA-----RAGLLSV--GERV 346

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T  G  + D +I ++  
Sbjct: 347 AVTDAGRLLADGIITDILA 365


>gi|29832109|ref|NP_826743.1| coproporphyrinogen III oxidase [Streptomyces avermitilis MA-4680]
 gi|29609227|dbj|BAC73278.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces avermitilis MA-4680]
          Length = 410

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 189/398 (47%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++  
Sbjct: 21  ALAGAAERPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYAETLIDEVRLA 80

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+  
Sbjct: 81  RKVLGDDPRPVRTVFVGGGTPTLLAADDLVRMLGAVRDEFGLADDAEVTTEANPESVDPA 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R  G NR+S G+QS  +  L+ L R H        +  AR   F  ++ DLIY  
Sbjct: 141 YLATLRAGGFNRVSFGMQSARQHVLKVLDRTHTPGRPERCVAEARAAGFDHVNLDLIYGT 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 201 PGETDDDWRASLDAALGAGPDHISAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 260

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             I S+ G   YE+SN +       LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 261 DEILSSAGFDWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 316

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   +         +E LS E +  E +++ LRLREG  +        R   +  
Sbjct: 317 KHPGAYAGALAAGKSPGAGRELLSEEDRRVERVLLELRLREGCPLSLL-----RPDGLAA 371

Query: 359 ERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
            R     G +E           T RG  + D+V+ +L 
Sbjct: 372 SRRALSDGLLEPGPYDAGHAVLTLRGRLLADAVVRDLV 409


>gi|315613436|ref|ZP_07888344.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis ATCC
           49296]
 gi|315314432|gb|EFU62476.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis ATCC
           49296]
          Length = 376

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 126/384 (32%), Positives = 206/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     +++ VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDTDKIAVLKRSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMAQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLNAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG + ++
Sbjct: 293 RITEEHLSQREQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|171779991|ref|ZP_02920895.1| hypothetical protein STRINF_01778 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281339|gb|EDT46774.1| hypothetical protein STRINF_01778 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 376

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   + ++Q+ + E +        + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDEYLQALIREFESY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + K+  +S   E TIEANP  +  +  +  + + VNR+SL
Sbjct: 58  IGGGTPTSITAEQLEYLLTNLTKHLDLSVLEEFTIEANPGDLTEDKIEVLKHSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I +L    F  +S DLIYALP QTM   +  + +A
Sbjct: 118 GVQTFNDKHLKQIGRSHNEAQIYSTISNLKEAGFHNISIDLIYALPGQTMEDVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP E++  +++    S   A+G   YEIS
Sbjct: 178 IALDIPHLSLYSLILEHHTVFMNKMRRGKLQLPKEDLEAEMFEYIISELEANGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNAEYFGVGAGASGYLNGVRYRNRGPI----QHYLKAVAQ-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ ++  +E L +GLR + G+S+  +E   G + +    +  R L +QG +   
Sbjct: 293 RLSEEKLTKDEMMEEELFLGLRKKTGVSIARFEEKFGLSFEERYGQIVRELCQQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V+    +
Sbjct: 352 DDKVVRMTKKGLFLGDTVVERFIL 375


>gi|260590052|ref|ZP_05855965.1| putative oxygen-independent coproporphyrinogen III oxidase [Blautia
           hansenii DSM 20583]
 gi|260539564|gb|EEX20133.1| putative oxygen-independent coproporphyrinogen III oxidase [Blautia
           hansenii DSM 20583]
          Length = 381

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 135/383 (35%), Positives = 221/383 (57%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              LG+Y+H PFCVKKC YCDF S     +  Q+ ++ + L+E++  R+      +S+IF
Sbjct: 2   KKDLGLYIHIPFCVKKCEYCDFLSWNAGEEERQQ-YVAALLSEIESYREFAKGYRVSTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++ P+ +  IL  I + + +    EIT+E NP +V+    Q Y++ GVNR+S+
Sbjct: 61  IGGGTPSVLLPKQMEDILQKIYEIFELERRPEITVEVNPGTVDEEKLQCYKENGVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS++++ LR LGR H   E + +  LAR   F  +S DLI ++P QT+ +W+ EL+ A
Sbjct: 121 GLQSVKDEKLRLLGRIHTYQEFVESYELARKAGFDNISIDLISSVPGQTLQEWKEELETA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +   +H+S+YQL IE+GT FY+ + +   +LP E  + ++Y  T       G   YEIS
Sbjct: 181 AAQNPEHISVYQLIIEEGTPFYEKYAEHPELLPDEETSREIYLWTGKFLKEAGYGQYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G ES HNL YW  GDY+G+G GA S V      + +S  K   ++L+   K    
Sbjct: 241 NYAKPGKESRHNLKYWERGDYLGLGLGAASMV----RNIRMSNTKDMRTYLERCDKPKTM 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERV 371
             + +FL   +Q +EF+ +GLR   G+S K+++ + GR +D+  E+ L +    G +   
Sbjct: 297 REDVQFLEEPRQMEEFMFLGLRKTRGVSKKEFKRIFGREMDMVYEKALHKCLENGMLLEH 356

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +  R+  ++ G  + + V++   
Sbjct: 357 K-DRIFLSEEGTLLSNMVLSEFL 378


>gi|254519882|ref|ZP_05131938.1| coproporphyrinogen III oxidase [Clostridium sp. 7_2_43FAA]
 gi|226913631|gb|EEH98832.1| coproporphyrinogen III oxidase [Clostridium sp. 7_2_43FAA]
          Length = 377

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 212/384 (55%), Gaps = 16/384 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC +KC YCDF S+     + +++++ +   E+    +      I SIF 
Sbjct: 5   KEIALYIHIPFCKQKCFYCDFPSYASLDHL-KDDYVDALCKEID---EKVIDYKIKSIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +E   I  +L  I+K   ++ N+E T+E NP ++E    +     GVNRIS+G
Sbjct: 61  GGGTPSYLEINQIYKLLKTISKL-NLTENMEFTMECNPGALEKEKLETMLSGGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+++   L+ +GR H+  +     +LAR   F  ++ DL++ LP Q + +W+  L+   
Sbjct: 120 LQAVQNSLLKDIGRIHSFKQFEENFNLARKVGFKNINVDLMFGLPNQKVDEWKESLETIA 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L IE+GT+FYK+ +   L+LPSE+   ++Y+ T+ I   HG + YEISN
Sbjct: 180 KLNPEHISAYSLIIEEGTVFYKLWERNKLILPSEDDEREMYSTTKEILKEHGYNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +S  G E  HN  YWR  DY+G+G  + S +        I   +  +S+++ V  N   +
Sbjct: 240 YSKPGYECYHNKVYWRCDDYLGVGSASSSFIDGKR----IKNIEDVKSYIEKVNSNESVI 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIERV 371
            E    S E   +EF+ MGLR+  G+S+ +++   G +++       E+N+ ++  +  +
Sbjct: 296 EEVIENSKEDNMEEFIFMGLRMNVGVSINEFKGRFGIHINSIYKDVIEKNINKKLLV--L 353

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   LR T +G+ + + V+++  +
Sbjct: 354 ENDILRLTDKGIELSNLVMSDFIL 377


>gi|306831739|ref|ZP_07464896.1| coproporphyrinogen dehydrogenase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426164|gb|EFM29279.1| coproporphyrinogen dehydrogenase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 403

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++Q+ + E +        + + +++
Sbjct: 30  TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLQALIREFESY----DIKQLRTLY 84

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SL
Sbjct: 85  IGGGTPTSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN S+  + I HL    F  +S DLIYALP QTM   +  + +A
Sbjct: 145 GVQTFNDKQLKRIGRSHNESQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKA 204

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEIS
Sbjct: 205 IALDIPHLSLYSLILENHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEIS 264

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 265 NFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNA 319

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ ++  +E L +GLR + G+S+  +E   G + +    +    L +QG +   
Sbjct: 320 RLSEEVLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFEERYGQIVTELCQQGLLVP- 378

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 379 DDKVVRMTKKGLFLGDTVAERFIL 402


>gi|306824955|ref|ZP_07458298.1| coproporphyrinogen dehydrogenase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432782|gb|EFM35755.1| coproporphyrinogen dehydrogenase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 376

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 206/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     +++ VNR+SL
Sbjct: 58  IGGGTPTALSASQLEVLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKQSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMAQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLSAVEA-GDA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR+ +    E  R+L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFEGLYGEIIRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|331266093|ref|YP_004325723.1| coproporphyrinogen III oxidase,oxygen-independent
           coproporphyrinogen III oxidase,putative [Streptococcus
           oralis Uo5]
 gi|326682765|emb|CBZ00382.1| coproporphyrinogen III oxidase,oxygen-independent
           coproporphyrinogen III oxidase,putative [Streptococcus
           oralis Uo5]
          Length = 376

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++V+     +++ VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDVDKIAVLKQSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMAQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIITELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLNAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S+  +E   GR+ D    +  R+L +QG + ++
Sbjct: 293 RITEEHLSQREQMEEEMFLGLRKKSGVSMARFEEKFGRSFDELYGKIIRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|282861821|ref|ZP_06270885.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           ACTE]
 gi|282563637|gb|EFB69175.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           ACTE]
          Length = 413

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 121/398 (30%), Positives = 189/398 (47%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+    + E++  
Sbjct: 24  ALEGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGALASRDNYAAHLVEEVRQA 83

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++ + EIT EANP SV   
Sbjct: 84  RKVLGDDPRPVRTVFVGGGTPTLLPAADLVRMLAAIREEFGLADDAEITTEANPESVGPA 143

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q  R+ G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 144 YLQALREGGFNRISFGMQSARQHVLKILDRTHTPGRPEACVAEARAAGFEHVNLDLIYGT 203

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 204 PGESDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 263

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A G   YE+SN S       LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 264 DEAMAAAGFSWYEVSNWSRTPEGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 319

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + + +       +E L  E +  E +++ LRL EG  +            +  
Sbjct: 320 KHPGAYAQALAEGRSPGAGREVLGDEDRRVERILLELRLVEGCPLSL-----LAPAGLAA 374

Query: 359 ERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
                  G +E   F   R   T RG  + D+V+ +L 
Sbjct: 375 AGRAVADGLLEPGPFGEGRAVLTLRGRLLADAVVRDLV 412


>gi|288905645|ref|YP_003430867.1| coproporphyrinogen III oxidase [Streptococcus gallolyticus UCN34]
 gi|288732371|emb|CBI13943.1| putative coproporphyrinogen III oxidase [Streptococcus gallolyticus
           UCN34]
          Length = 376

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++Q+ + E +        + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLQALIREFESY----DIKQLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I HL    F  +S DLIYALP QTM   +  + +A
Sbjct: 118 GVQTFNDKQLKRIGRSHNEAQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEIS
Sbjct: 178 IALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ ++  +E L +GLR + G+S+  +E   G + +    +    L +QG +   
Sbjct: 293 RLSEEVLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFEERYGQIVIELCQQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DDKVVRMTKKGLFLGDTVAERFIL 375


>gi|331084368|ref|ZP_08333472.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330401632|gb|EGG81213.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 381

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/383 (35%), Positives = 221/383 (57%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              LG+Y+H PFCVKKC YCDF S     +  Q+ ++ + L+E++  R+      +S+IF
Sbjct: 2   KKDLGLYIHIPFCVKKCEYCDFLSWNAEEEERQQ-YVAALLSEIESYREFAKGYRVSTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++ P+ +  IL  I + + +    EITIE NP +V+    Q Y++ GVNR+S+
Sbjct: 61  IGGGTPSVLLPKQMEDILQKIYEIFELERRAEITIEVNPGTVDEEKLQCYKENGVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS++++ LR LGR H   E + +  LAR   F  +S DLI ++P QT+ +W+ EL+ A
Sbjct: 121 GLQSVKDEKLRLLGRIHTYQEFVESYELARKAGFDNISIDLISSVPGQTLQEWKEELETA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +   +H+S+YQL IE+GT FY+ + +   +LP E  + ++Y  T       G   YEIS
Sbjct: 181 AAQNPEHISVYQLIIEEGTPFYEKYAEHPELLPDEETSREIYLWTGKFLKEAGYEQYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G ES HNL YW  GDY+G+G GA S V      + +S  K   ++L+   K    
Sbjct: 241 NYAKPGKESRHNLKYWERGDYLGLGLGAASMV----RNIRMSNTKDMRTYLERCDKPKTM 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERV 371
             + +FL   +Q +EF+ +GLR   G+S K+++ + GR +D+  E+ L +    G +   
Sbjct: 297 REDVQFLEEPRQMEEFMFLGLRKTRGVSKKEFKRIFGREMDMVYEKALHKCLENGMLLEH 356

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +  R+  ++ G  + + V++   
Sbjct: 357 K-DRIFLSEEGTLLSNMVLSEFL 378


>gi|291550851|emb|CBL27113.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus torques L2-14]
          Length = 385

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 133/389 (34%), Positives = 216/389 (55%), Gaps = 15/389 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +L +Y+H PFCV+KC YCDF S     +  Q  ++ + + E+Q  ++L+G   + +I
Sbjct: 2   KKRNLELYLHIPFCVRKCNYCDFFS-ASGTEEEQAAYVSAMVQEIQSYQELSGEYEVQTI 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+ P+ I  I + I   ++V+ N EIT+E NP +V++      + AGVNR+S
Sbjct: 61  FLGGGTPSLLTPEQIEQIFNAIYHTFSVNENAEITMEMNPGTVDIEKLHAMKAAGVNRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS + + L+ LGR H   E +    L     F   + DL+ ALP QT+  +E  L +
Sbjct: 121 IGLQSAQNEELKMLGRIHTFEEFLETWKLIEQAGFKNRNIDLMSALPGQTIESYEDTLSK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-----LPSENVAVDLYNLTQSITSAHGL 248
            L+   +H+S Y L +E+GT+FY  ++ G L      LPSE     +  LT    +  G+
Sbjct: 181 VLALEPEHISAYSLILEEGTVFYDWYEKGKLDRGAWKLPSEEEEYAMGELTILRLAEAGM 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           + YEISN++  G E  HNL YW   +Y+GIG G+ S +K           +  +++++ +
Sbjct: 241 YRYEISNYAKPGKECRHNLGYWDRVEYLGIGAGSSSLIKGER----FDHIRDRKAYIEKI 296

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQ 365
           R     ++++E LS E Q +EF+ +GLR  EG+S  D++   G+N+D    +    L+ +
Sbjct: 297 RNGESILIDREILSVESQMEEFMYLGLRKVEGVSRTDFQNCFGKNVDDVYGKILDKLEEE 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +E     R+R T RGM + + V+A   
Sbjct: 357 QLLE-FSGDRIRLTHRGMDVSNCVLAEFL 384


>gi|297160564|gb|ADI10276.1| coproporphyrinogen III oxidase [Streptomyces bingchenggensis BCW-1]
          Length = 410

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/399 (30%), Positives = 194/399 (48%), Gaps = 22/399 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQW 61
           + + G  +  LG Y+H P+C  +C YCDFN++      G       ++N+    + E++ 
Sbjct: 20  SAVAGAANRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYADMVVEEVRL 79

Query: 62  MRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++   E+T EANP SV+ 
Sbjct: 80  ARKVLGDDPRPVETVFVGGGTPTLLAAADLGRMLGAIRDEFGLAEGAEVTTEANPESVDP 139

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +  R AG NR+S G+QS  +  LR L R H      A +  AR   F  ++ DLIY 
Sbjct: 140 RYLEQLRAAGFNRVSFGMQSARQHVLRVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYG 199

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y +
Sbjct: 200 TPGESDEDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLI 259

Query: 239 TQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            + + SA G   YE+SN +   A    HN  YWR  D+ G GPGAHS V      V    
Sbjct: 260 AEEMLSAAGFRWYEVSNWATSDAGRCRHNELYWRGADWWGAGPGAHSHVGG----VRWWN 315

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KHP ++ + + +       +E L+ E++  E +++ LRL EG  +              
Sbjct: 316 VKHPGAYAQALSEGRSPGAGREVLTGEERRVERILLELRLAEGCPLDLLAPAGAAAAARA 375

Query: 358 CERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
                   G +E   +   R   T RG  + D+V+ +L 
Sbjct: 376 VA-----DGLLEPEPYGAGRAVLTLRGRLLADAVVRDLV 409


>gi|258592996|emb|CBE69307.1| putative oxygen-independent coproporphyrinogen III oxidase (yggW)
           [NC10 bacterium 'Dutch sediment']
          Length = 397

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 128/394 (32%), Positives = 211/394 (53%), Gaps = 11/394 (2%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-- 63
           + ++ +  Q S S G+Y+H P+C+ +C YCDFNS+ R   V  E ++++   E+      
Sbjct: 10  SVDSTLNTQHSTSFGLYIHIPYCLSRCQYCDFNSY-RFDDVQIEQYLEALAQEIAHRASS 68

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            +   R + S+FFGGGTPS++    +  ILD     +T     E+++EANP +V++   +
Sbjct: 69  DVIRHRPVCSVFFGGGTPSILHASQLIGILDQCRAAFTFEVGAEVSLEANPGTVDLPKLR 128

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ GV R+S+GVQ+++++ L+ +GR H A EA  A  +AR   F  ++ D+++ LP Q
Sbjct: 129 TLREGGVTRLSIGVQAVQDRLLQRIGRAHTAHEAERAYRMAREAGFGDINLDVMFGLPGQ 188

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            M  W   L   +    +H+S Y L +E+GT  Y+ H+ G++ LP E     +Y +    
Sbjct: 189 NMDDWSETLDWVIGVEPEHVSAYGLILEEGTPLYQEHRKGEIGLPDEETETMMYQMAVDR 248

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
               G   YEISN +  G    HNL YW++ +Y+GIG GAHS V           E  P 
Sbjct: 249 LCNDGFEHYEISNFARPGFRCRHNLVYWQHQEYVGIGAGAHSFVAGRRFYN----ELLPA 304

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-- 360
            ++  + +   AV   E LS+E    E LM+GLRLR G+ V+ ++ + G       +R  
Sbjct: 305 RYVSAIAERETAVACGEELSAEMLRSERLMLGLRLRSGLDVQTFKDVLGVEELAASDRVT 364

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L   GF+  ++  R++  +RG+ + + +I  L 
Sbjct: 365 RLLDDGFL-CLKDGRVQIAERGLLVANELIVQLL 397


>gi|257875548|ref|ZP_05655201.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC20]
 gi|257809714|gb|EEV38534.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC20]
          Length = 396

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 10/391 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N+ + + + ++  Y+H PFC   C YCDFN      +   + +I++ L E++        
Sbjct: 8   NDPSTKSAQNISAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIEALLKEIELTLLRQPI 66

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               +I+ GGGTP+ +    +  +L G+ +     +  E T+EANP  +        +  
Sbjct: 67  NEAETIYIGGGTPTSLSANQLDRLLSGVHELLPTHTTKEFTVEANPGDLSEEKMLVLKNH 126

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            V R+S+GVQ+ + + L+ +GR H A +  + I L     F  ++ DLIYALP Q++  +
Sbjct: 127 QVTRLSMGVQTFDNRLLKKIGRKHTAEDVYSTIQLLEKHDFQNVTIDLIYALPGQSIESF 186

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L RA+   + H ++Y L +E  T+F    + G + LPS+     +++   +  +  G
Sbjct: 187 RDTLTRAIDLGLPHYAMYSLILENKTMFMNWVRQGRMALPSQEAETQMFDEAIAAMTKAG 246

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L+ YEISN +  G ESLHNL YW    Y G G GA   +    ++    I    + +LK 
Sbjct: 247 LNQYEISNFARPGYESLHNLVYWNNEHYFGFGAGASGYLGQTRYKNKGPI----QHYLKP 302

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQR 364
           +++N   + E E L++  Q +E L +GLR + GIS   +    G++           L  
Sbjct: 303 LQENQLPIHETEELTTSNQMEEELFLGLRKKAGISKIRFAEKFGKSFQEIYGSTSEQLIL 362

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G++   Q  R+  T+ GM + + V     +
Sbjct: 363 KGWLA-SQGDRVFLTKAGMFIGNEVFEAFLL 392


>gi|302545465|ref|ZP_07297807.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302463083|gb|EFL26176.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces himastatinicus ATCC 53653]
          Length = 413

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 117/398 (29%), Positives = 194/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+ +    E++  
Sbjct: 24  ALAGAAGRPLGFYLHVPYCATRCGYCDFNTYTAAELRGSGGALASRDNYAEQVAEEVRLA 83

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++   EIT EANP SV+  
Sbjct: 84  RKVLGDDPRPVETVFVGGGTPTLLAAADLGRMLGAIRDEFGLADGAEITTEANPESVDPR 143

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R+AG NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 144 YLEELREAGFNRMSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIYGT 203

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++   D Y + 
Sbjct: 204 PGESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDAHADRYLIA 263

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           + + SA G   YE+SN +        HN  YWR  D+ G GPGAHS +      V     
Sbjct: 264 EEMLSAAGFAWYEVSNWATSPEGRCRHNELYWRGADWWGAGPGAHSHLGG----VRWWNV 319

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + + +       +E LS E++  E +++ LRL EG  ++       R      
Sbjct: 320 KHPGAYAQALGEGRSPGAGRELLSDEERRVERILLELRLSEGCPLELL-----RPAGAAA 374

Query: 359 ERNLQRQGFIERVQFSRLR--CTQRGMTMLDSVIANLA 394
                  G +E   + + R   T +G  + D+V+ ++ 
Sbjct: 375 AARALEDGLLEPEPYGQGRAVLTLKGRLLADAVVRDVV 412


>gi|33597533|ref|NP_885176.1| coproporphyrinogen III oxidase [Bordetella parapertussis 12822]
 gi|33601931|ref|NP_889491.1| coproporphyrinogen III oxidase [Bordetella bronchiseptica RB50]
 gi|33573961|emb|CAE38279.1| putative porphyrin oxidoreductase [Bordetella parapertussis]
 gi|33576369|emb|CAE33447.1| putative porphyrin oxidoreductase [Bordetella bronchiseptica RB50]
          Length = 406

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 127/375 (33%), Positives = 213/375 (56%), Gaps = 8/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +   +++        R + S+F G
Sbjct: 32  PLSVYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRADLEQAVPEVWGRQVISVFIG 91

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     +  + EIT+EANP + E   F+ Y  +GV R+SLG+
Sbjct: 92  GGTPSLLSAAGLDELLAMLRACLNLLPDAEITMEANPGTAEAGRFRDYAASGVTRLSLGI 151

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L  LGR H+A++A AAI +A+    R++ DL++ALP Q + Q   +L++AL++
Sbjct: 152 QSFDDAQLSRLGRIHDAAQARAAIAMAQQAVERVNLDLMFALPGQELEQCRADLRQALAF 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K        LP ++ +  + ++ +   +  GL  YE+S ++
Sbjct: 212 GTEHLSLYHLTLEPNTVFAKYPP----ELPDDDASAAMQDMVEETLAQAGLARYEVSAYA 267

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAVV 316
             GA   HNLNYW +GDY+G+GPGAH ++         +  ++P+SW++  + ++G  V 
Sbjct: 268 RRGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIERQARLRNPDSWMQRAMARDGSHVA 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
           E   + + +   EF++  LRL+EG++   +    G +L           R+G ++    +
Sbjct: 328 ESRVVGAGELPFEFMLNALRLKEGVAASSFGERTGLSLAAIAHQLEAATRRGLLD-ADPT 386

Query: 375 RLRCTQRGMTMLDSV 389
           RLR T  G   L+ +
Sbjct: 387 RLRATALGWRFLNDL 401


>gi|152979528|ref|YP_001345157.1| coproporphyrinogen III oxidase [Actinobacillus succinogenes 130Z]
 gi|150841251|gb|ABR75222.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinobacillus succinogenes 130Z]
          Length = 391

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 131/388 (33%), Positives = 208/388 (53%), Gaps = 21/388 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++ ++ + ++++  LT+++            R++ S
Sbjct: 11  PLSLYVHIPWCVQKCPYCDFNSHGQKGEIPERDYVRHLLTDLRQDLTRYAASVNGRALQS 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   +NI  +L GI      + N+EIT+EANP + E   F+GY  AGVNRI
Sbjct: 71  IFIGGGTPSLFSAENIGELLHGIRAQIAFADNIEITLEANPGTAEAERFRGYVNAGVNRI 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS  ++ L+ LGR HN++EA +A+     L        + DL++ LP QT+ Q   
Sbjct: 131 SMGIQSFSDEKLKILGRIHNSAEAKSAVGFAQDLLGRGLKSFNLDLMHGLPNQTVQQALD 190

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+RA+     HLS YQLTIE  TLF          LP +++  D++     + +A G  
Sbjct: 191 DLRRAIVLNPPHLSWYQLTIEPNTLFAYRPP----ALPDDDLLWDIFEQGHQLLTAAGYQ 246

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++     R+   S  KHP+ +L+  
Sbjct: 247 QYETSAYAKPGFQCRHNLNYWRFGDYLAIGCGAHGKLGFTDGRIVRYSKTKHPKGYLR-- 304

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQG 366
              G  +  ++ +    +A EF M   RL E +   + +   G +     +       Q 
Sbjct: 305 ---GEYLFNEKNVPESDRAFEFFMNRFRLLEPVPKAELKQFTGLSQSAVKDDIEWAVAQK 361

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     +  + ++ G   L+ ++    
Sbjct: 362 YLTETDRT-WQISEHGKLFLNELLQRFL 388


>gi|308069970|ref|YP_003871575.1| Oxygen-independent coproporphyrinogen III oxidase 1
           (coproporphyrinogenase) [Paenibacillus polymyxa E681]
 gi|305859249|gb|ADM71037.1| Oxygen-independent coproporphyrinogen III oxidase 1
           (Coproporphyrinogenase) [Paenibacillus polymyxa E681]
          Length = 395

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 198/385 (51%), Gaps = 12/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            S    VY+H PFC  KC YCDFNS+V + +   E ++ +   EM+   +L  P  I +I
Sbjct: 11  SSAPQAVYLHIPFCTNKCFYCDFNSYVLKDQPVME-YLYALEREMEHTVKLHPPGEIKTI 69

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           F GGGTP+ + P+ +   L  +   +   + ++E ++EANP + +       ++ GVNR+
Sbjct: 70  FVGGGTPTTLNPKEMEYFLKSVRTYFPNWAEDIEFSMEANPGTTDFEKLSVMKEGGVNRL 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+ + + L  +GR H+  +   ++  AR +    +S DL++ LP QT+      + 
Sbjct: 130 SFGVQAFQNELLTGIGRIHSTDDVYRSLENARKVGLDNLSIDLMFGLPNQTVDMLHESVS 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RAL   + H S+Y L +E+ TLF+ +++   L LP E+  +++Y L        G   YE
Sbjct: 190 RALELELPHYSIYSLKVEENTLFHTLYQKNQLPLPHEDDELEMYLLLMRRMKEAGYEQYE 249

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G  S HN+ YWR  DY G+G GAH  V    H     I  + E+      +NG
Sbjct: 250 ISNFAKPGFGSKHNMTYWRNEDYYGLGAGAHGYVGRERHMNIKGINPYVEA-----SRNG 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIE 369
              ++   + + +  ++FLM+GLR+ EG+S   +E   G+ L+      L      G IE
Sbjct: 305 LPRLDSFEVPAAEAMEDFLMVGLRMLEGVSKSRFEAQFGQALEDTFTAPLGKMLNAGLIE 364

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            ++    R ++RG+   + V A   
Sbjct: 365 SIEDGY-RLSERGILFGNDVFAEFI 388


>gi|256832777|ref|YP_003161504.1| oxygen-independent coproporphyrinogen III oxidase [Jonesia
           denitrificans DSM 20603]
 gi|256686308|gb|ACV09201.1| oxygen-independent coproporphyrinogen III oxidase [Jonesia
           denitrificans DSM 20603]
          Length = 423

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 129/405 (31%), Positives = 198/405 (48%), Gaps = 28/405 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT-- 66
           +     + GVY+H PFC  +C YCDFN++      G   Q N+ Q+   E+   RQ+   
Sbjct: 23  SDPSDRAFGVYIHVPFCSVRCGYCDFNTYTASELGGGASQRNYAQTAAQEILLARQVMDR 82

Query: 67  ---GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
               PR  S+IFFGGGTP+L+  Q++  ++  + + W ++   E+T EANP SV  ++ +
Sbjct: 83  AGYPPRPASTIFFGGGTPTLLPAQDLVSLVSTVRQTWGLADGAEVTTEANPDSVTPHSME 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
                G  R+SLG+QS+    L  L R HN +   +A+  A      +S DLIY  P ++
Sbjct: 143 ILANGGFTRVSLGMQSVVPHVLATLERTHNPANVASAVRWAHEAGLEVSVDLIYGTPGES 202

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           M  W   L  A++    H+S Y LT+E+GT      + GD+ LPS +   D Y +  ++ 
Sbjct: 203 MDDWRRSLDAAIATGAGHVSAYALTVEQGTRMAVQVRRGDIELPSLDDQADKYEVADTVL 262

Query: 244 SAHGLHAYEISNHSFLGAE-----SLHNLNYWRYGDYIGIGPGAHSRV--------KVGS 290
           S  G   YEISN +   A+       HNL YWR  D+ GIGPGAHS +           S
Sbjct: 263 SDAGYQWYEISNWARPRADGELAVCRHNLAYWRGHDWWGIGPGAHSFMAGDPNAHDDAPS 322

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             V     KHP  +   +         +E L+ +    E +M+G+RLREG+ V+      
Sbjct: 323 AGVRWWNVKHPIRYAHALENGQSPAAGRELLTGDDAHLERVMLGIRLREGMPVQWVAEE- 381

Query: 351 GRNLDIECERNLQRQGFIERVQ--FSRLRCTQRGMTMLDSVIANL 393
                 E   +L  +  I+       R++ T+ G  M D+++ +L
Sbjct: 382 ----RREVLASLIARELIDARAVFAGRVQLTRSGRLMADAIVRDL 422


>gi|257453736|ref|ZP_05619017.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enhydrobacter aerosaccus SK60]
 gi|257448828|gb|EEV23790.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enhydrobacter aerosaccus SK60]
          Length = 382

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/382 (35%), Positives = 204/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CVKKCPYCDFNSH  R  +    ++ + L +++        R IS+IF G
Sbjct: 8   PLSLYIHIPWCVKKCPYCDFNSHESRTPIDFVGYVDALLDDLKSQLSFVQGRKISTIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+       +  GI    T++ + EIT+EANP++VE   F  Y   G+NR+SLGV
Sbjct: 68  GGTPSLLPIAQYQQLFAGINAQLTLTEDCEITMEANPATVEHAPFHEYLAVGINRLSLGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR HN  +A+ AI  A+   F +++ DL++ LP QT+T    +LQ+A+ 
Sbjct: 128 QSFQAQKLAALGRIHNPQQALFAIQNAQQAGFKKLNVDLMHGLPNQTLTDALSDLQQAID 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H+S YQLTIE  T+FY+       +LP + + VD++     +  A+G   YE+S  
Sbjct: 188 LGVSHISWYQLTIEPNTVFYR----NTPILPDDEILVDIFEQGAELLQANGFVQYEVSAW 243

Query: 257 SFLG--AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           S       S HNLNYW++GDY+ IG GAH +V         S  + P+ +   V +   A
Sbjct: 244 SRQADFQPSQHNLNYWQFGDYLAIGAGAHGKVTRPDGIYRFSKSRLPKDY--RVNQ---A 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
            +  + +       EF+M GLRL+ G+  + W    G    +       L  +G +E + 
Sbjct: 299 AIGWQAIEPSDLPFEFMMNGLRLKNGVPKQFWTQRTGLAWSVIEPQLIQLHNRGLVE-LS 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              + CT +G   L+ V+    
Sbjct: 358 GDHIHCTAQGFLFLNQVLQEFL 379


>gi|325978675|ref|YP_004288391.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178603|emb|CBZ48647.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 403

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++Q+ + E +        + + +++
Sbjct: 30  TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLQALIREFESY----DIKQLRTLY 84

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SL
Sbjct: 85  IGGGTPTSITAQQLDYLLTNLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I HL    F  +S DLIYALP QTM   +  + +A
Sbjct: 145 GVQTFNDKQLKRIGRSHNEAQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKA 204

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEIS
Sbjct: 205 IALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEIS 264

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 265 NFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNA 319

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ ++  +E L +GLR + G+S+  +E   G + +    +    L +QG +   
Sbjct: 320 RLSEEVLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFEERYGQIVIELCQQGLLVP- 378

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 379 DDKVVRMTKKGLFLGDTVAERFIL 402


>gi|110806863|ref|YP_690383.1| coproporphyrinogen III oxidase [Shigella flexneri 5 str. 8401]
 gi|110616411|gb|ABF05078.1| putative oxidase [Shigella flexneri 5 str. 8401]
          Length = 378

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 206/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAAAAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T+ G   L+S++  L +
Sbjct: 356 DYWQITEHGKLFLNSLL-ELFL 376


>gi|257898259|ref|ZP_05677912.1| coproporphyrinogen III oxidase [Enterococcus faecium Com15]
 gi|257836171|gb|EEV61245.1| coproporphyrinogen III oxidase [Enterococcus faecium Com15]
          Length = 388

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 189/386 (48%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +        E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQDGKEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETKMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGNIRYRNKGPI----QHYLRPLRVN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +    L+ +G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGIAKKHFYDRYQQTIESVYGDVLMKLEEEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEDRIYLTPRGTFLGNNVFERFL 385


>gi|157374365|ref|YP_001472965.1| coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
 gi|157316739|gb|ABV35837.1| Coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 378

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 16/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH +  ++ Q+ +I + + +++   Q    R + SIF G
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHGQHGELPQQAYIDALIADLKNDIQYVQGRKLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   IA +L  ++     S  +EI++EANP ++E ++F+ Y +AGV R+S+GV
Sbjct: 66  GGTPSLFDAAQIARLLTQVSLLIPFSEQIEISMEANPGTLEHDDFKAYYQAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+  EA  A  +A        + DL++ LP Q+  +   ++  A +
Sbjct: 126 QSFSSDKLNLLGRIHDKDEAKVAARMASEAGYDSFNLDLMHGLPNQSFDEAMADIDTAAA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE+ TLF+         LP +     +Y   Q   ++ G   YEIS +
Sbjct: 186 LNPPHLSWYQLTIEQNTLFHSKPP----QLPDDEALWKIYEQGQKKLASLGYEQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G    HN+NYW++GDY+GIG GAH +V +   +  +     KHP+ +L       H 
Sbjct: 242 AKPGYRCQHNINYWQFGDYLGIGCGAHGKVTLLESNKIIRTVKIKHPKGYLAA----EHY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERV 371
             +   +  +++A E+LM   RL   I   ++E   G +   ++    +   +   IE  
Sbjct: 298 TFDLTEVPEDERALEYLMNRFRLISPIPKSEFEQRTGLSRTVIEEGIAKAKAKSLLIENE 357

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           ++  L  T +G   ++ +++   
Sbjct: 358 EYWEL--TSKGQLFVNELLSQFC 378


>gi|257887147|ref|ZP_05666800.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,141,733]
 gi|293571903|ref|ZP_06682919.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E980]
 gi|257823201|gb|EEV50133.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,141,733]
 gi|291608157|gb|EFF37463.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium E980]
          Length = 388

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 189/386 (48%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +        E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQDGKEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMKFLKAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETKMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGNIRYRNKGPI----QHYLRPLRVN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +    L+ +G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGIAKKHFYDRYQQTIESVYGDVLMKLEEEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEERIYLTPRGTFLGNNVFERFL 385


>gi|257894311|ref|ZP_05673964.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,408]
 gi|257830690|gb|EEV57297.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,231,408]
          Length = 383

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 192/384 (50%), Gaps = 10/384 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIAN 392
              +  R+  T RG  + ++V   
Sbjct: 361 VN-EEDRVYLTPRGTFLGNNVFER 383


>gi|300940763|ref|ZP_07155309.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 21-1]
 gi|300454463|gb|EFK17956.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Escherichia coli MS 21-1]
          Length = 378

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 128/370 (34%), Positives = 202/370 (54%), Gaps = 14/370 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDNDVAYAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G + ++          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSQYTGLSEEVIRSQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGM 383
              + T+ G 
Sbjct: 356 DYWQITEHGK 365


>gi|254491774|ref|ZP_05104953.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Methylophaga thiooxidans DMS010]
 gi|224463252|gb|EEF79522.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Methylophaga thiooxydans DMS010]
          Length = 390

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 121/383 (31%), Positives = 215/383 (56%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    ++ ++ ++ + L +++    L   R++ +IF G
Sbjct: 13  PLSLYIHVPWCVRKCPYCDFNSHHSPQEIPEKAYVDALLRDLEQEVPLIWGRTVQTIFIG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +    +  G+     +  + EIT+EANP ++E   F+ YR  G+NR+S+G+
Sbjct: 73  GGTPSLFSAEAYDRLFSGLRALLPLHHDAEITLEANPGTLEAGRFKEYRALGINRLSIGI 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +++L  LGR HN+ +AI A+  A    +   + DL++ LP Q   +   +++ A++
Sbjct: 133 QSFNDEALTKLGRIHNSKQAIKAVEAAHAADYDNFNLDLMFGLPGQDENKAAADVETAIA 192

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  TLFY         LP ++   D     Q+  +  G   YE S +
Sbjct: 193 LQPAHISYYQLTIEPNTLFYAQPP----TLPDDDPIYDWQLQNQTRLAKAGYMQYETSAY 248

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISI-EKHPESWLKMVRKNGHA 314
           +  G +  HN+NYW++GDYIGIG GAH ++   +  ++A  + +K P++++    K+   
Sbjct: 249 AQQGRQCRHNVNYWQFGDYIGIGAGAHGKISSAAPQQIARRVKQKQPQAFIDTAGKDTS- 307

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           ++E+  ++ ++   EF++  +RL +G++   ++   G  +       +  +  G +E   
Sbjct: 308 LLEQSLVAEDEVGFEFMLNAMRLLDGVATPLFQQHTGVPISTIRGAMQRAEALGLVEH-S 366

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            SR+R T++G   L+S+I  L +
Sbjct: 367 ISRIRPTEKGQRYLNSLI-ELFL 388


>gi|296532220|ref|ZP_06894969.1| possible coproporphyrinogen dehydrogenase [Roseomonas cervicalis
           ATCC 49957]
 gi|296267450|gb|EFH13326.1| possible coproporphyrinogen dehydrogenase [Roseomonas cervicalis
           ATCC 49957]
          Length = 439

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 171/387 (44%), Positives = 228/387 (58%), Gaps = 6/387 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSI 71
           G     + +YVHWPFC+ KCPYCDFNSHV R +V    +  +   E+    +  G  R +
Sbjct: 53  GAMPEPIALYVHWPFCLAKCPYCDFNSHV-RERVDAARYGAALRRELAHEAERLGEKRPL 111

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +SIFFGGGTPSL+ P+ +A ++    + +    ++EIT+EANP+SVE+      R+AGVN
Sbjct: 112 ASIFFGGGTPSLMPPEVVADVIAEARRLFEPLPDIEITLEANPTSVEIAKLAALREAGVN 171

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R SLG+QSL++++L FLGR H+A +A+AA+  AR +FPR+SFDLIYA P Q + +W  EL
Sbjct: 172 RASLGIQSLQDKALGFLGRQHDAKQAVAALEAARALFPRISFDLIYARPGQGLEEWRAEL 231

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+ A DHLSLYQLTIE GT F   +  G   LP    A  LY  T       GL  Y
Sbjct: 232 RQALALAADHLSLYQLTIEPGTRFATEYARGAFALPEGEEAAALYYATGEEAGRFGLLPY 291

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN++  GAES HNL YWRYGDY+GIG GAH RV      VA    + PE WL  V   
Sbjct: 292 EVSNYARPGAESRHNLAYWRYGDYLGIGAGAHQRVTRDGTVVAARRHRAPEEWLSRVEAE 351

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGF 367
           GHAV  +E L+   +A E L+MGLRL EG+S    +   G  L    D         + +
Sbjct: 352 GHAVTREEHLAPLDRAREALLMGLRLSEGVSPARLQARTGLTLAEAVDPAMLTACLEEDY 411

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           +       L  T  G   LD+++  L 
Sbjct: 412 LRWTPEGNLATTWEGRLRLDALLPVLL 438


>gi|51473375|ref|YP_067132.1| coproporphyrinogen III oxidase [Rickettsia typhi str. Wilmington]
 gi|51459687|gb|AAU03650.1| Coprogen oxidase [Rickettsia typhi str. Wilmington]
          Length = 391

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 162/384 (42%), Positives = 240/384 (62%), Gaps = 8/384 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +I+S+  E+++ + +   + I SIF
Sbjct: 10  TNDLSIYIHWPFCLSKCPYCDFNSHVVS-TIDYNQWIKSYEKEIEYFKFIIQNKYIKSIF 68

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  + +I++ I     + +  EIT+E NP+S E    + ++ AG+NRIS+
Sbjct: 69  FGGGTPSLMHPLIVEVIINKINNLGIIDNKTEITLETNPTSFEAEKLKAFKSAGINRISI 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H++ +AI  I  A  I PR+SFDLIYA   QT+  WE EL++A+
Sbjct: 129 GVQSLKEDDLKTLGRTHDSMQAIKTIEAANTIVPRVSFDLIYARNGQTLKDWEEELKQAM 188

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A  H++LYQLTIEKGT FYK+ K+G+L+LPS + A ++Y  T     +     YEISN
Sbjct: 189 SLATSHIALYQLTIEKGTPFYKLFKNGNLILPSVDEAAEMYEWTNHYLESKKYFRYEISN 248

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ LG E LHNL YW Y  Y+GIGPGAHSR ++  +  +AI +  +P  WL  VR     
Sbjct: 249 YAVLGHECLHNLTYWNYNSYLGIGPGAHSRIIENANSVLAIMMLHNPAKWLDAVRIKNVG 308

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L++++  +E LMMGLRLR+GI++   E          LD+   ++ Q QG I+ 
Sbjct: 309 IQTHAKLTNQEIIEEILMMGLRLRKGINIPTLEQKLSAKLENILDMNNLQHYQNQGLIKL 368

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +   +  T +G+ + + ++  L 
Sbjct: 369 DE--HIYLTDKGLMLHNYIVPRLI 390


>gi|310643082|ref|YP_003947840.1| oxygen-independent coproporphyrinogen iii oxidase [Paenibacillus
           polymyxa SC2]
 gi|309248032|gb|ADO57599.1| Oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           polymyxa SC2]
          Length = 395

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 198/385 (51%), Gaps = 12/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            S    VY+H PFC  KC YCDFNS+V + +   E ++ +   EM+   +L  P  I +I
Sbjct: 11  SSAPQAVYLHIPFCTNKCFYCDFNSYVLKDQPVME-YLYALEREMEHTVKLHPPGEIKTI 69

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           F GGGTP+ + P+ +   L  +   +   + ++E ++EANP + +       ++ GVNR+
Sbjct: 70  FVGGGTPTTLNPKEMEYFLRSVRTYFPNWAEDIEFSMEANPGTTDFEKLSVMKEGGVNRL 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+ +   L  +GR H+  +   ++  AR      +S DL++ LP QT+   +  + 
Sbjct: 130 SFGVQAFQNDLLTGIGRIHSTDDVYRSLENARKAGLDNLSIDLMFGLPNQTVDMLDESVS 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RAL   + H S+Y L +E+ TLF+ +++   L LP E+  +++Y L        G   YE
Sbjct: 190 RALELDLPHYSIYSLKVEENTLFHTLYQKNQLPLPHEDDELEMYLLLMRRMKEAGYEQYE 249

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G  S HN+ YWR  DY G+G GAH  V    H     I  + E+      +NG
Sbjct: 250 ISNFAKPGLGSKHNMTYWRNEDYYGLGAGAHGYVGRERHMNIKGINPYVEA-----TRNG 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIE 369
              ++   + + +  ++FLM+GLR+ EG+S   +E   G+ L+       R +   G IE
Sbjct: 305 LPRLDSFEVPTAEAMEDFLMVGLRMLEGVSKSRFEAQFGQTLEDTFTVPLRKMLNAGLIE 364

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            ++    R ++RG+   + V A   
Sbjct: 365 SIEDGY-RLSERGILFGNDVFAEFI 388


>gi|257865921|ref|ZP_05645574.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC30]
 gi|257872254|ref|ZP_05651907.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC10]
 gi|257799855|gb|EEV28907.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC30]
 gi|257806418|gb|EEV35240.1| coproporphyrinogen III oxidase [Enterococcus casseliflavus EC10]
          Length = 396

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 110/391 (28%), Positives = 192/391 (49%), Gaps = 10/391 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N+ + + + ++  Y+H PFC   C YCDFN      +   + +I++ L E++        
Sbjct: 8   NDPSTKSAQNISAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIEALLKEIELSLLRQPI 66

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               +I+ GGGTP+ +    +  +L G+ +     +  E T+EANP  +        +  
Sbjct: 67  NEAETIYIGGGTPTSLSANQLDRLLSGVHELLPTHTTKEFTVEANPGDLSEEKMLVLKNH 126

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
            V R+S+GVQ+ + + L+ +GR H A +  + I L     F  ++ DLIYALP Q++  +
Sbjct: 127 QVTRLSMGVQTFDNRLLKKIGRKHTAEDVYSTIQLLEKHDFQNVTIDLIYALPGQSIESF 186

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L RA+   + H ++Y L +E  T+F    + G + LPS+     +++   +  +  G
Sbjct: 187 RDTLTRAIDLGLPHYAMYSLILENKTMFMNWVRQGRMALPSQEAETQMFDEAIAAMTKAG 246

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L+ YEISN +  G ESLHNL YW    Y G G GA   +    ++    I    + +LK 
Sbjct: 247 LNQYEISNFARPGYESLHNLVYWNNEHYFGFGAGASGYIGQTRYKNKGPI----QHYLKP 302

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQR 364
           +++N   + E E L++  Q +E L +GLR + GIS   +    G++           L +
Sbjct: 303 LQENQLPIHETEELTTSNQMEEELFLGLRKKAGISKIRFAEKFGKSFQEIYGSTSEQLIQ 362

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G++   Q  R+  T+ GM + + V     +
Sbjct: 363 KGWLA-SQGDRVFLTKAGMFIGNEVSEAFLL 392


>gi|33592684|ref|NP_880328.1| coproporphyrinogen III oxidase [Bordetella pertussis Tohama I]
 gi|33572330|emb|CAE41884.1| putative porphyrin oxidoreductase [Bordetella pertussis Tohama I]
 gi|332382099|gb|AEE66946.1| coproporphyrinogen III oxidase [Bordetella pertussis CS]
          Length = 406

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 127/375 (33%), Positives = 213/375 (56%), Gaps = 8/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L VYVH P+CV+KCPYCDFNSH    ++ +  ++ +   +++        R + S+F G
Sbjct: 32  PLSVYVHVPWCVRKCPYCDFNSHAAPGEIPERAYLDALRADLEQAVPEVWGRQVISVFIG 91

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +L  +     +  + EIT+EANP + E   F+ Y  +GV R+SLG+
Sbjct: 92  GGTPSLLSAAGLDELLAMLRACLNLLPDAEITMEANPGTAEAGRFRDYAASGVTRLSLGI 151

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L  LGR H+A++A AAI +A+    R++ DL++ALP Q + Q   +L++AL++
Sbjct: 152 QSFDDAQLSRLGRIHDAAQARAAIAMAQQTVERVNLDLMFALPGQELEQCRADLRQALAF 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY LT+E  T+F K        LP ++ +  + ++ +   +  GL  YE+S ++
Sbjct: 212 GTEHLSLYHLTLEPNTVFAKYPP----ELPDDDASAAMQDMVEETLAQAGLARYEVSAYA 267

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAVV 316
             GA   HNLNYW +GDY+G+GPGAH ++         +  ++P+SW++  + ++G  V 
Sbjct: 268 RRGARCRHNLNYWEFGDYLGLGPGAHGKLSFHDRIERQARLRNPDSWMQRAMARDGSHVA 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
           E   + + +   EF++  LRL+EG++   +    G +L           R+G ++    +
Sbjct: 328 ESRVVGAGELPFEFMLNALRLKEGVAAPSFGERTGLSLAAIAHQLEAATRRGLLD-ADPT 386

Query: 375 RLRCTQRGMTMLDSV 389
           RLR T  G   L+ +
Sbjct: 387 RLRATALGWRFLNDL 401


>gi|329896511|ref|ZP_08271569.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
 gi|328921728|gb|EGG29101.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
          Length = 380

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 153/380 (40%), Positives = 219/380 (57%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H+P+C +KCPYCDFNSHV    + +   + + + +     ++ G R I S+F GGG
Sbjct: 8   GLYIHFPWCERKCPYCDFNSHVSGQALPEAEMVTALINDYTSDLEIYGARPIDSLFIGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSLI  Q+IA +LDGI +   +S   EIT+EANP S E   F GYR AGVNR+S+G+QS
Sbjct: 68  TPSLISAQSIARLLDGIDRLTPLSDTTEITMEANPGSSEQEKFAGYRAAGVNRLSIGIQS 127

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LR LGR H+  EA  AI  A+   F R++ DL+Y LP QT+ Q   ++++ LSY 
Sbjct: 128 FNSEHLRRLGRIHSRDEADHAIKAAQAAGFERINIDLMYGLPDQTLKQALHDVEQGLSYN 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS YQLTIE  T+FYK        LP ++   D+ +  +   +  GL  YE+S  + 
Sbjct: 188 TGHLSWYQLTIEPNTVFYKQRP----PLPDDDAIADIADEGEHFMTQSGLKRYEVSAFAG 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HN+NYWR+GDY GIG GAH ++    H +  + ++ P+S+L+   +     VE 
Sbjct: 244 TGQECRHNVNYWRFGDYFGIGAGAHGKISFNDHIIRTAKQRMPDSYLQASDRASRLAVES 303

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE----RNLQRQGFIERVQFS 374
             L   Q   EF++  LRLREG+ +  ++   G  L  EC     R LQ QG +      
Sbjct: 304 -ALDQAQLISEFMLNALRLREGVEIALFQRSTG--LAPECMHHTWRRLQAQGLMVEGD-D 359

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL+ T+ G   L++VI +  
Sbjct: 360 RLQTTELGWRFLNTVIESFM 379


>gi|170725687|ref|YP_001759713.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
 gi|169811034|gb|ACA85618.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
          Length = 378

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 120/382 (31%), Positives = 201/382 (52%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + ++++    Q    R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQEYVDALISDLAHDLQYVQGRKLHSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I  +L  +++      ++EIT+EANP ++E ++F+ Y +AGV R+S+GV
Sbjct: 66  GGTPSLFHASQIEKLLTHVSQVIPFQDDIEITMEANPGTLEHDDFEAYYQAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+  EA  A   A +      + DL++ LP Q+  +   ++  A +
Sbjct: 126 QSFSSDKLNLLGRIHDEDEAKVAAQKALSAGYKSFNLDLMHGLPNQSFAEAMADIDTAAA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE+ TLF+         LP +    ++Y   Q   +A G   YEIS +
Sbjct: 186 LSPPHLSWYQLTIEQNTLFHSRPP----QLPDDEALWEIYEQGQKKLAALGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HN+NYW++GDY+GIG GAH ++ +   +  +     KHP+ +L         
Sbjct: 242 AKPGFQCRHNINYWQFGDYLGIGCGAHGKITILNENKIIRTVKIKHPKGYLAT----DSY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQ 372
             E   ++ E +A E+LM   RL   I  +++E   G + ++     +  + +  +    
Sbjct: 298 NFETTEVAKEDRALEYLMNRFRLMSPIPKREFEQRTGLSREVLTSGIQRAKEKQLLTEND 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
                 T RG   ++ +++   
Sbjct: 358 -EYWELTSRGKLFVNELLSQFC 378


>gi|119775616|ref|YP_928356.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           amazonensis SB2B]
 gi|119768116|gb|ABM00687.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella amazonensis SB2B]
          Length = 379

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 137/382 (35%), Positives = 199/382 (52%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH ++  + QE ++ + L ++         R++ SIF G
Sbjct: 7   PLSLYVHIPWCVQKCPYCDFNSHGKQGDLPQEAYVDALLADLDADLNYVQGRTLYSIFIG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  +LDGI        ++EIT+EANP ++E ++F  YR AGV R+S+GV
Sbjct: 67  GGTPSLFDASAIGRLLDGIKARIPFCDDIEITMEANPGTLEHDDFSAYRGAGVTRLSVGV 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L  LGR H   EA  A  LA        + DL++ LP Q+  +   ++  A S
Sbjct: 127 QSFSKDKLNLLGRIHGRDEATRAAELATAAGYQSFNLDLMHGLPNQSFDEAMADIDTAAS 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF+         LP +     +Y   Q   +A G   YEIS +
Sbjct: 187 LNPPHLSWYQLTIEPNTLFHSRPP----QLPDDEALWHIYEQGQKKLAALGYEQYEISAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V + +    I     KHP+ +L         
Sbjct: 243 AKPGFQCRHNLNYWQFGDYLGIGCGAHGKVTIPTENCIIRTVKIKHPKGYLAASD----Y 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--LDIECERNLQRQGFIERVQ 372
           + E   +  E +  EFLM  LRL   I+ +++E   G N  L  E       +G I    
Sbjct: 299 LSELTQVQEEDRPLEFLMNRLRLMTPIAKREFESRTGLNASLLDEGMAQASEKGLIVLGD 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            S    T +G   ++ ++++  
Sbjct: 359 ES-WTLTPKGHMFVNDLLSHFL 379


>gi|309798492|ref|ZP_07692776.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus infantis SK1302]
 gi|308117884|gb|EFO55276.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus infantis SK1302]
          Length = 376

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   E++++  L E          + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVESYLEHLLQEFHSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSASQLEVLLEGLTKNLDLSMLEELTIEANPGDLDADKIAVLQNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHTEKDIYENIDRLKLAGFDNISIDLIYALPGQTMDQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 VALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +LK V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGIRYKNHGPI----RHYLKAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S+  +E   GR+      +  ++L +QG + ++
Sbjct: 293 RINEEHLSPREQMEEEMFLGLRKKSGVSMARFEEKFGRSFQELYGDIVKDLIQQGLM-QL 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + D+V     +
Sbjct: 352 DGDHVRMTKRGLFLGDTVAERFIL 375


>gi|227551717|ref|ZP_03981766.1| Coproporphyrinogen dehydrogenase [Enterococcus faecium TX1330]
 gi|257895684|ref|ZP_05675337.1| coproporphyrinogen III oxidase [Enterococcus faecium Com12]
 gi|293377706|ref|ZP_06623895.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium PC4.1]
 gi|227179158|gb|EEI60130.1| Coproporphyrinogen dehydrogenase [Enterococcus faecium TX1330]
 gi|257832249|gb|EEV58670.1| coproporphyrinogen III oxidase [Enterococcus faecium Com12]
 gi|292643706|gb|EFF61827.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecium PC4.1]
          Length = 388

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 189/386 (48%), Gaps = 10/386 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +        E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQDGKEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMKFLKAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLKLPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGNIRYRNKGPI----QHYLRPLRIN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +    L+ +G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGIAKKHFYDRYQQTIESVYGDVLMKLEEEGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  R+  T RG  + ++V     
Sbjct: 361 VN-EEERIYLTPRGTFLGNNVFERFL 385


>gi|325677129|ref|ZP_08156798.1| coproporphyrinogen dehydrogenase [Rhodococcus equi ATCC 33707]
 gi|325552114|gb|EGD21807.1| coproporphyrinogen dehydrogenase [Rhodococcus equi ATCC 33707]
          Length = 395

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 126/391 (32%), Positives = 191/391 (48%), Gaps = 15/391 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL 65
           + + G G+   G+YVH PFC  +C YCDFN++           ++++++   E+    ++
Sbjct: 14  SALEGVGTRPFGIYVHVPFCATRCGYCDFNTYTAGELGTSASPQSWLEALKRELASAAEI 73

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           TG   + ++F GGGTPSL+    +A +L  +  ++ ++   E+T E+NP S     F   
Sbjct: 74  TGAPKVDTVFVGGGTPSLLGGDGLAEVLGAVQASFGLADGAEVTTESNPESTSPEFFTRL 133

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           R+AG  RISLG+QS  E  LR L R H       AA       F  ++ DLIY  P +T 
Sbjct: 134 REAGFTRISLGMQSAAEHVLRVLDRTHTPGRAVAAAREARAAGFDHVNLDLIYGTPGETD 193

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  L   L   VDH+S Y L +E GT   +  + G+L  P ++V    Y    +  +
Sbjct: 194 RDLDASLDAVLGAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDARLA 253

Query: 245 AHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
             GLH YE+SN +   A    HNL YW  GD+ G GPGAHS V      V     KHP  
Sbjct: 254 DAGLHWYEVSNWAANDASRCRHNLGYWDGGDWWGAGPGAHSHVGG----VRWWNVKHPAR 309

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +      V   E L++E    E +M+ +RLR G+ + D     G +     ER + 
Sbjct: 310 YADRLSAGELPVGGSETLTAEDAHVERVMLTVRLRTGLPLSDL----GDSERGAAER-VV 364

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             G   RV+ + L  T RG  + D+V+ ++ 
Sbjct: 365 ADGL-ARVEGAHLVLTDRGRLLADAVVRDIL 394


>gi|221133358|ref|ZP_03559663.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola sp.
           HTCC2999]
          Length = 382

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 207/382 (54%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  +  + ++ ++   L +++    L   RSI +IF G
Sbjct: 9   PLSLYIHVPWCVQKCPYCDFNSHTLKGGIPEKEYVAHLLDDLRADAHLAQGRSIRTIFIG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P+ + ++L+G+ +   V+ + EIT+EANP +VE   F G+   GVNR+S+GV
Sbjct: 69  GGTPSLLSPEALTILLNGVKQIIPVTLDAEITLEANPGTVEAGKFAGFVAGGVNRLSIGV 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR H+  +A  AI  A +      + D+++ LP+QT+     +L++A+ 
Sbjct: 129 QSFHPRQLKALGRIHDDQQAHHAIAQAHDAGLHSFNIDIMHGLPEQTVVHGLDDLRQAIH 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   H+S YQLTIE  T F+         LP ++   D+    + + +  G   YEIS +
Sbjct: 189 HQSKHISWYQLTIEPNTSFHSKPP----QLPDDDTLWDIQEQGEVLLAEAGFEQYEISGY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +  HNLNYWR+GDY+GIG GAHS++            KHP+ ++ +       V 
Sbjct: 245 AQSGFQCQHNLNYWRFGDYLGIGCGAHSKITTSHGIQRTEKIKHPKGYMNI---GQSYVF 301

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
           ++  +  +    EF M  LRL E   V ++EML G  L    I      Q +G +     
Sbjct: 302 KQWLVDKDDYPFEFFMNRLRLVEACGVDEYEMLTGMKLPASTISLMAQAQDKGTMIITAK 361

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T  G   L++++  L  
Sbjct: 362 D-WQVTALGRRYLNTLLEQLIA 382


>gi|323490049|ref|ZP_08095270.1| coproporphyrinogen III oxidase [Planococcus donghaensis MPA1U2]
 gi|323396345|gb|EGA89170.1| coproporphyrinogen III oxidase [Planococcus donghaensis MPA1U2]
          Length = 379

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 121/381 (31%), Positives = 198/381 (51%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGG 78
           G+Y+H PFC + C YCDFN    + +   + +I S   E+   +Q     + + +IF GG
Sbjct: 4   GLYIHIPFCHQICFYCDFNKVYFKDQ-PVDAYIDSLGKELALWKQQGALDKPLETIFLGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  +  +L  I +   ++ N+E T EANP  +  +  Q     GVNR+S+GVQ
Sbjct: 63  GTPTSLTPAQLEKLLAYIHRYVPMAENLEWTSEANPDELTKDKMQVLFDGGVNRLSMGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +E  L+ LGR H+ S+   A+  AR   F  +SFDL+Y LP Q+M QW+  L+RA ++
Sbjct: 123 SFDEDLLKRLGRTHSNSDVKRAVDSARQVGFENLSFDLMYGLPGQSMQQWDDTLERAFAF 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L IE  T+FY +   G L   +E++  D+Y    +     GL  YEISN +
Sbjct: 183 DMPHFSAYSLIIEPKTVFYNLMTKGKLNTVTEDLEADMYEKLMNEMDKRGLKQYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +YIG+G GAH  V    +  A  ++K    ++  + +    ++ 
Sbjct: 243 RPGHESHHNLLYWDNVEYIGVGAGAHGYVDGVRYSNAGPLKK----YMSPLDEGERPILS 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
              +   ++ +E + +GLR   G+S+  ++    + +       L +   QG +E +   
Sbjct: 299 THIVPPHEKMEEEMFLGLRKTAGVSLHHFQTKFQKPMQDVYGTILDKEIAQGNLE-IANG 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            L+ T++G  + + V     +
Sbjct: 358 FLKLTRKGRFVGNEVFQQFLL 378


>gi|50083685|ref|YP_045195.1| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter sp. ADP1]
 gi|49529661|emb|CAG67373.1| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter sp. ADP1]
          Length = 385

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 135/390 (34%), Positives = 207/390 (53%), Gaps = 14/390 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLT 66
           +       L +Y+H P+CV+KCPYCDFNSH           ++ ++Q+ + + +   +  
Sbjct: 4   LLNPAEIPLSLYIHMPWCVRKCPYCDFNSHAVPNGALSLELEQQYLQALVADFETQVKFV 63

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R I S+F GGGTPSLI  Q    + + I        + EIT+EANP +VE + F  Y 
Sbjct: 64  QGRKIHSVFIGGGTPSLISAQGYQWLFEKIRALVDFEQDCEITLEANPGTVEHDPFADYL 123

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +AG+NR+SLGVQS ++  L  LGR H++  AI AI LA+   F R++ DL++ L +QT+ 
Sbjct: 124 EAGINRLSLGVQSFDQDHLERLGRIHSSENAIEAIKLAKQAGFERVNADLMHGLSQQTLE 183

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           Q  ++L+ A+     H+S YQLTIE  T+F++       VLP + +   +    +    A
Sbjct: 184 QALLDLKLAVDNGATHISWYQLTIEPNTVFFR----TQPVLPQDEILEQIQRQGEQYLKA 239

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L
Sbjct: 240 QGFSNYEVSAWRKE-KPSAHNLNYWQFGDYLAIGAGAHGKVTQPDGVYRFQKTRLPKDYL 298

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQR 364
             V       V+ + + +++   EF+M  LRL EG++   +E   G +L DIE   N  R
Sbjct: 299 AKVPAEH---VQWKRIEADELPFEFMMNALRLNEGVATNLYEQRTGLSLVDIEPALNALR 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           Q  +      R+ CT++G   L+SV+    
Sbjct: 356 QKKLLVNDPERIACTEQGHLFLNSVLEEFL 385


>gi|220912730|ref|YP_002488039.1| coproporphyrinogen III oxidase [Arthrobacter chlorophenolicus A6]
 gi|219859608|gb|ACL39950.1| oxygen-independent coproporphyrinogen III oxidase [Arthrobacter
           chlorophenolicus A6]
          Length = 409

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 122/397 (30%), Positives = 192/397 (48%), Gaps = 20/397 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQL 65
               G G  + G+YVH PFC  +C YCDFN++      G   Q+ +  +  +E+ +   +
Sbjct: 20  QAAVGAGDRAFGLYVHIPFCAVRCGYCDFNTYTATELGGGASQDAYAGTAASEVAFAADV 79

Query: 66  TGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                   R +S++FFGGGTP+L+  +++ALIL      W +    E+T EANP SV   
Sbjct: 80  LKDSGVPDRKLSTVFFGGGTPTLLPAEDLALILRTAIGQWGIEEGAEVTTEANPDSVTPE 139

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +    R AG  R+S G+QS     L+ L R H  S     +  AR+    +S DLIY  P
Sbjct: 140 SLAVLRDAGFTRVSFGMQSAVPHVLKVLDRTHTPSRVPLVVQWARDAGLAVSLDLIYGTP 199

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +++  W+  L+ ALSY  DH+S Y L +E GT      + G++    ++   D Y L  
Sbjct: 200 GESLADWQYSLETALSYEPDHISAYALIVEDGTKLAAQIRRGEVPGIDDDDHADKYELAD 259

Query: 241 SITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + ++ GL  YE+SN +    +   HNL YWR  D+ GIGPGAHS V      V     K
Sbjct: 260 RLITSAGLEWYEVSNWARTPEQACRHNLAYWRGDDWWGIGPGAHSHVGG----VRWWNVK 315

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++   + +       +E L +E +  E +M+  RL+ G+ V   + +    +     
Sbjct: 316 HPAAYAGRLAQGTSPAAGRETLDAETRNVERVMLEARLQSGLEVASLDTVGRHQI----- 370

Query: 360 RNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
             L  +G ++        L  T +G  + D+V+  + 
Sbjct: 371 AGLIAEGLVDPGAAFRGTLVLTLKGRLLADAVVRRIL 407


>gi|322376217|ref|ZP_08050710.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. M334]
 gi|321282024|gb|EFX59031.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus sp. M334]
          Length = 376

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 123/384 (32%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S+  E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSALEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKSGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR  D    E  R+L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRTFDGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +  R+R T+RG+ + D+V     +
Sbjct: 352 EGDRVRMTKRGLFLGDTVAERFIL 375


>gi|126652838|ref|ZP_01724983.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
 gi|126590374|gb|EAZ84494.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
          Length = 381

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFG 77
           GVY+H PFC + C YCDFN    + +   + +I++   EM+   +      R I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKFYFKNQ-PVDEYIEALGKEMELATKKNPESFRHIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + PQ +  +L  I     ++S  E T EANP  + V   Q   + GVNR+S+GV
Sbjct: 63  GGTPTALSPQQLDKLLTLIRTYIPMNSVTEFTSEANPDELSVEKLQVLFEGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L+ +GR H+       I +A+ I F  +S DL+Y LP QTM QW+  L++AL+
Sbjct: 123 QSFDQELLQKIGRTHSNEHVYETIAMAKEIGFQNISIDLMYGLPGQTMVQWKDSLEKALA 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L+LP+E++  D+Y++       HGL  YEISN 
Sbjct: 183 LDLPHFSAYSLIVEPKTIFYNQYAKGKLLLPTEDLEADMYDVLMQQMELHGLQQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW   +Y G G GAH  +    +     ++K    +++ V      +V
Sbjct: 243 AKPGYHSEHNKIYWDNDEYAGFGAGAHGYLAGVRYSNHGPLKK----YMETVFAGELPIV 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
            +  +S  ++ +E + +GLR  EG+  K +       +        + L  +G +E    
Sbjct: 299 HEHEVSQAEKREEQMFLGLRKTEGVKHKIYVEKLKVPIVAHYDSVLKELVSKGLLEHDDV 358

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V     +
Sbjct: 359 G-VRLTRKGRFVGNEVFQQFLL 379


>gi|223041937|ref|ZP_03612122.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus minor 202]
 gi|223017291|gb|EEF15718.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus minor 202]
          Length = 385

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 134/390 (34%), Positives = 208/390 (53%), Gaps = 23/390 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L ++       ++  G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEKEYIQHLLADLSQDLTAYQKAIGERKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L  + K       +EIT+EANP + E   F GY + GVNRI
Sbjct: 67  IFIGGGTPSLFSAEGIQYLLAEVQKRIAFEDQIEITLEANPGTAEAERFLGYVQGGVNRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR HN  EAI A+  A+N         + DL++ LP Q+++Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHNREEAIQAVEFAKNAASLGLRSFNLDLMHGLPNQSVSQALS 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A+     HLS YQLTIE  T+FY         LP ++   D++     + ++ G  
Sbjct: 187 DLKQAIVLNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTSAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKDYQCQHNLNYWRFGDYLAIGCGAHGKITYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQ 365
              G     +E ++ E +  EF M   RL E     D+E L G   ++++    + +++ 
Sbjct: 301 ---GEYRYSQELIALEDRPFEFFMNRFRLLEATPKTDFEQLTGLTIKSIEPIISQAIEKN 357

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              E  Q    + TQ G   L+ ++    V
Sbjct: 358 YLTETTQ--HWQITQHGKLFLNELLEGFLV 385


>gi|307330489|ref|ZP_07609631.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           violaceusniger Tu 4113]
 gi|306883824|gb|EFN14868.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           violaceusniger Tu 4113]
          Length = 400

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 121/400 (30%), Positives = 199/400 (49%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
              + G     LG Y+H P+C  +C YCDFN++      G       ++N+ +  + E++
Sbjct: 9   ATALAGAERRPLGFYLHVPYCATRCGYCDFNTYTASELRGSGGVLASRDNYAEQVVEEVR 68

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I + + +++ VE+T EANP SV+
Sbjct: 69  LARKVLGDDPRPVETVFVGGGTPTLLAAADLGRMLGAIREEFGLAAGVEVTTEANPESVD 128

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R+AG NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 129 PRYLAELREAGFNRISFGMQSARQPVLKVLDRTHTPGRPEACVAEARAAGFDHVNLDLIY 188

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 189 GTPGESDADWRASLEAALGAGPDHVSAYALIVEEGTRLARRIRRGEVPMTDDDVHADRYL 248

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + + I SA G   YE+SN +        HN  YWR  D+ G GPGAHS V      V   
Sbjct: 249 IAEEILSAAGFTWYEVSNWATSPAGRCRHNELYWRGADWWGAGPGAHSHVGG----VRWW 304

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++ + + +       +E L++E++  E +++ LRL EG  ++       R    
Sbjct: 305 NVKHPGAYAQALGEGRSPGAGRELLTAEERRVERILLELRLAEGCPLELL-----RPAGA 359

Query: 357 ECERNLQRQGFIERVQFSRLR--CTQRGMTMLDSVIANLA 394
                    G ++   + R +   T RG  + D+V+ +L 
Sbjct: 360 AAAARALEDGLLDPEPYGRGQAVLTLRGRLLADAVVRDLV 399


>gi|167623100|ref|YP_001673394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella halifaxensis HAW-EB4]
 gi|167353122|gb|ABZ75735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Shewanella halifaxensis HAW-EB4]
          Length = 378

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 198/382 (51%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q  ++ + + +++        R++ +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQHGELPQTEYVDALIKDLKQDLHYVQGRALHTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +  +IA +L  +      S N+EIT+EANP ++E ++F+ Y KAG+ R+S+GV
Sbjct: 66  GGTPSLFDAAHIARLLTEVDTLIPFSDNIEITMEANPGTLEHDDFEAYCKAGITRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR HN  EA  A   A+ + +   + DL++ LP Q+  +   +++ A  
Sbjct: 126 QSFSTDKLNLLGRIHNQDEAQVAAQKAKVSGYQSFNLDLMHGLPNQSFDEALADIETAAE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T    ++      LP +     +Y   Q   +  G   YEIS +
Sbjct: 186 LAPPHLSWYQLTIEPNT----LYHSKPPQLPDDENLWQIYEQGQKRLAELGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK--VGSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYW++GDY+GIG GAH +V     +  +     KHP+ +L         
Sbjct: 242 AKEGYQCRHNLNYWQFGDYLGIGCGAHGKVTLLNENKIIRTVKIKHPKGYLAA----DIY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
             E   ++ E +A E+LM  LRL   I   ++E       D   +  +    +G +    
Sbjct: 298 TYETTEVAEEDRALEYLMNRLRLMSPIPKLEFEQRTSLPRDTISDGIKQACAKGLMTESD 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T +G   ++ +++   
Sbjct: 358 -EHWQLTSKGHLFVNELLSQFL 378


>gi|256787818|ref|ZP_05526249.1| coproporphyrinogen III oxidase [Streptomyces lividans TK24]
          Length = 410

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 195/400 (48%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++
Sbjct: 19  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLVDEVR 78

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+
Sbjct: 79  LARKVLGDDPREVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAPDAEITTEANPESVD 138

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 139 PAYLATLRAGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIY 198

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 199 GTPGESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 258

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + +   SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 259 IAEEALSAAGYDWYEVSNWATSDAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 314

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +         +E L+ E +  E +++ LRLREG+ +        R   +
Sbjct: 315 NVKHPGAYAGALAAGKSPGAGREILTDEDRRVERILLELRLREGVPLSLL-----REAGL 369

Query: 357 ECERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
              R    +G ++    +      T RG  + D+V+ +L 
Sbjct: 370 AASRRALSEGLLQEGPYEAGSAVLTLRGRLLADAVVRDLV 409


>gi|83594968|ref|YP_428720.1| coproporphyrinogen III oxidase [Rhodospirillum rubrum ATCC 11170]
 gi|83577882|gb|ABC24433.1| coproporphyrinogen III oxidase, anaerobic [Rhodospirillum rubrum
           ATCC 11170]
          Length = 414

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 172/379 (45%), Positives = 231/379 (60%), Gaps = 9/379 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SI 71
           QG    GVYVHWPFC+ KCPYCDFNSHV    + Q  + Q  L +++       PR   +
Sbjct: 19  QGDEGFGVYVHWPFCLSKCPYCDFNSHVAAAPLDQAAWRQGLLRDLETQAGALPPRQRRL 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S+FFGGGTPSL++P  +  ++D     W V+ ++EIT+EANP +VE   F  +R+AGV 
Sbjct: 79  TSVFFGGGTPSLMDPATVGAVIDKALALWPVADDLEITLEANPGTVERGRFADFRQAGVT 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLGVQSLE+++LRFLGR H+A+ A+AA+  AR +F R SFDLIYA P QT+  WE EL
Sbjct: 139 RLSLGVQSLEDEALRFLGRRHDAAGALAALETARALFERFSFDLIYARPGQTLDAWEDEL 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            RA++    HLS+YQLTIE GT F+  H  G  VLP E++   L+ LT+   +  GL AY
Sbjct: 199 ARAVALGPSHLSVYQLTIEAGTRFFAEHARGAFVLPDEDLGAALFELTRQRLTEAGLPAY 258

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS---IEKHPESWLKMV 308
           E+SNH+  G ES HNL YWR G+Y+G+GPGAH R+   +   A       + PE WL+ V
Sbjct: 259 EVSNHARPGEESRHNLIYWRGGEYLGVGPGAHGRLTSATDEGAFQATVAHRAPEVWLRHV 318

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQR 364
            + GH +     +   Q+A+E +MMGLRL EG+  +    L G      LD         
Sbjct: 319 SQQGHGLKSTTAIDRRQRAEEMVMMGLRLEEGLVEERLLRLTGLGFAEVLDAGGLAMASE 378

Query: 365 QGFIERVQFSRLRCTQRGM 383
           +G + R     LR T  GM
Sbjct: 379 EGLLHRPAPGVLRATGAGM 397


>gi|332981294|ref|YP_004462735.1| oxygen-independent coproporphyrinogen III oxidase [Mahella
           australiensis 50-1 BON]
 gi|332698972|gb|AEE95913.1| oxygen-independent coproporphyrinogen III oxidase [Mahella
           australiensis 50-1 BON]
          Length = 379

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 124/383 (32%), Positives = 209/383 (54%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++S+G+Y+H PFC KKC YCDF S+       Q  +  + + EM     + G + IS++F
Sbjct: 2   ADSIGLYIHVPFCAKKCLYCDFTSYAGVLD-KQYVYKDAIIKEMGMRANIIGNKHISTLF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS+++   I  I+D + KN+ V  N E+TIE NP +V V N   Y+  G+NR+S+
Sbjct: 61  IGGGTPSIVDTTVINAIIDEVYKNFHVDQNAEVTIEINPGTVSVKNLTDYKSIGINRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ +++ L+ +GR H ++E + + + AR   F  ++ DL++ LP+QT+ QW   LQ  
Sbjct: 121 GLQAWQDELLKAIGRIHTSAEFVNSYNEAREVGFDNINVDLMFGLPQQTIGQWIRTLQAV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   +H+S Y L IE+GT  +KM   GD+    EN    +Y    ++  + G   YE+S
Sbjct: 181 VSLGPEHISCYDLQIEEGTPMHKMVVGGDIKPLDENTDRLMYKTATALLRSEGYERYEVS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G    HNLNYW  G Y+G+G  AHS +      +  +     +S++  +  +   
Sbjct: 241 NFAKPGFRCRHNLNYWHNGPYVGLGCAAHSHLD----HIRWANVSGLQSYIDTILDDNIP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
           +  +E++  + +  E +M+GLR  EG+  K +E   G  L          L   G +   
Sbjct: 297 IAFEEYIDRDTEMFETMMLGLRTSEGVDKKLFEERFGIRLYQRYGHVIDKLSAMGLMHND 356

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           + S ++ + +G+ +L+SV+    
Sbjct: 357 E-SAVKVSDKGVDVLNSVLVEFL 378


>gi|21221018|ref|NP_626797.1| coproporphyrinogen III oxidase [Streptomyces coelicolor A3(2)]
 gi|6714773|emb|CAB66237.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces coelicolor A3(2)]
          Length = 435

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 195/400 (48%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++
Sbjct: 44  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLVDEVR 103

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+
Sbjct: 104 LARKVLGDDPREVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAPDAEITTEANPESVD 163

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 164 PAYLATLRAGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIY 223

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 224 GTPGESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 283

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + +   SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 284 IAEEALSAAGYDWYEVSNWATSDAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 339

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +         +E L+ E +  E +++ LRLREG+ +        R   +
Sbjct: 340 NVKHPGAYAGALAAGKSPGAGREILTDEDRRVERILLELRLREGVPLSLL-----REAGL 394

Query: 357 ECERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
              R    +G ++    +      T RG  + D+V+ +L 
Sbjct: 395 AASRRALSEGLLQEGPYEAGSAVLTLRGRLLADAVVRDLV 434


>gi|292490865|ref|YP_003526304.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           halophilus Nc4]
 gi|291579460|gb|ADE13917.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           halophilus Nc4]
          Length = 385

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 131/370 (35%), Positives = 205/370 (55%), Gaps = 11/370 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH    +  +  +I + + +++        R I SIF G
Sbjct: 9   PLALYIHLPWCVRKCPYCDFNSHPLPEEFPETAYIDALIRDLEQDLPRIWGRRIHSIFMG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+++  +L  +    + +  +EIT+EANP +VE   F  +R  G+NR+SLG+
Sbjct: 69  GGTPSLFSPESLDRLLSALRARLSWAPQMEITLEANPGTVEQGRFTEFRSLGINRLSLGI 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +++L+ LGR H++ EA  AI +A    F  ++ DL++ LP QT TQ   ++  A+S
Sbjct: 129 QSFNDEALKNLGRIHSSQEACQAIAMAHTAGFDNINLDLMFGLPGQTETQALADITTAIS 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  H+S YQLTIE  T FY+        LPSE          Q+  +  G   YE+S  
Sbjct: 189 FAPSHISHYQLTIEPHTYFYRYPP----SLPSEEGIDTWQEACQAQLTHGGYGRYEVSAF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++     +    I   KHP ++L         
Sbjct: 245 AKKGRQCQHNLNYWRFGDYLGIGAGAHGKISDAMENRITRIWKIKHPSAYLTK-AGTAEG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV--Q 372
           +  +  LS ++ A EF++  LRL  G   + ++   G  + +  E+ L +   +E +   
Sbjct: 304 IGGETILSPQEAAFEFMLNALRLTGGFPSRLFQERVGLPISV-VEKALHQAETLELIEWD 362

Query: 373 FSRLRCTQRG 382
           F ++R T++G
Sbjct: 363 FQQIRPTEKG 372


>gi|295838954|ref|ZP_06825887.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           SPB74]
 gi|197695509|gb|EDY42442.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces sp.
           SPB74]
          Length = 413

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 118/398 (29%), Positives = 187/398 (46%), Gaps = 18/398 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
              + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++
Sbjct: 22  AQALDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+
Sbjct: 82  LAREVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R+ G NRIS G+QS     LR L RNH      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLETLREGGFNRISFGMQSARPHVLRVLDRNHTPGRPEACVAEARAAGFEHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y 
Sbjct: 202 GTPGESDADWRASLEAAIGAGPDHVSAYALIVEEGTGLARRVRRGEIPMTDDDEHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +   + +  G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IADELLAKAGFDWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   + +       +E L  E +  E +++ LRLREG  +             
Sbjct: 318 NVKHPGAYAAALAEGRSPGAGRELLGEEDRRVEHILLELRLREGCPLDLLLPAGREAAAR 377

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                L      E  +      T RG  + D+V+ +L 
Sbjct: 378 HRAAGLLDP---EAYEKGAAVLTLRGRLLADAVVRDLV 412


>gi|312114384|ref|YP_004011980.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311219513|gb|ADP70881.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 386

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 174/372 (46%), Positives = 234/372 (62%), Gaps = 3/372 (0%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           HWPFC KKCPYCDFNSH  R  + +  ++ + L E++     T  + ++S+FFGGGTPSL
Sbjct: 2   HWPFCEKKCPYCDFNSHAAR-SIDEARWLAAILRELETYACETARQPVASVFFGGGTPSL 60

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++ ++   +LD IA  W +S   EIT+EANPSSVE   F GYR AGVNRISLG+QSL + 
Sbjct: 61  MQARSAGAVLDRIAALWPISETCEITLEANPSSVEAGRFAGYRAAGVNRISLGIQSLHDD 120

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ LGR H+A+EA AA+ +A   F RMSFDLIYA P QT+  W  EL  ALS A  HLS
Sbjct: 121 ALKALGRIHDAAEARAALDIAARTFDRMSFDLIYARPGQTLDAWHAELTEALSLARGHLS 180

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLTIE  T F+ + + G L LP   +A + Y LTQ +  A GL AYE+SNH+  G ES
Sbjct: 181 LYQLTIEPETAFFALQRRGRLRLPEAELAAEFYTLTQKLCQATGLPAYEVSNHAAPGEES 240

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VAISIEKHPESWLKMVRKNGHAVVEKEFLS 322
            HNL YWRYGDY+G+GPGAH R +  + R +A +  K P +W + V   GH   E+  L 
Sbjct: 241 RHNLAYWRYGDYVGVGPGAHGRYRGAAGRKIATAALKSPLAWAEKVEALGHGREERVELG 300

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
           +  +A+E ++MGLR+ EG+ V+  E   G          L+ +  IE     R+  T  G
Sbjct: 301 AHDEAEEAVLMGLRISEGLDVRRLEARTGFRPAASVVTMLESERLIE-GADGRISTTGAG 359

Query: 383 MTMLDSVIANLA 394
             +L++V+  +A
Sbjct: 360 RLVLNAVVEAVA 371


>gi|283458054|ref|YP_003362665.1| coproporphyrinogen III oxidase [Rothia mucilaginosa DY-18]
 gi|283134080|dbj|BAI64845.1| coproporphyrinogen III oxidase [Rothia mucilaginosa DY-18]
          Length = 428

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 120/405 (29%), Positives = 196/405 (48%), Gaps = 22/405 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQ 64
             +  G  +    +YVH PFC  +C YCDFN++        +G   +    + E+ +  +
Sbjct: 18  ATSAAGCETRDFSLYVHIPFCSVRCGYCDFNTYATEDFGNGIGLGTYADDAIAEILFAAR 77

Query: 65  LT-----GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                    R + ++FFGGGTP+ +  +++  IL      + +    E+T EANP SV  
Sbjct: 78  TLETSGVAKRPMRTVFFGGGTPTKLPARDLVRILQAAIDVFGLVEGAEVTTEANPDSVTR 137

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            + Q  +  G  R+S G+QS+  + L+ L R H  S     +  A+ +  ++S DLIY  
Sbjct: 138 EDLQTLKDGGFTRVSFGMQSVVPEVLQVLDRTHTPSNVPKVVAWAKEVGLQVSVDLIYGS 197

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +++ QWE  ++ A+SY  DH+S Y L +E GT      + G+  +P E++  D+Y L 
Sbjct: 198 PGESLQQWERSVRAAISYEPDHISAYSLIVEDGTKLAAQIRRGEYTMPDEDLMADMYLLA 257

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           + + +  G + YE+SN+S      S HNL YWR  D+ GIGPGAHS V            
Sbjct: 258 EELLTEAGYNWYEVSNYSRSEDTRSDHNLAYWRNQDWWGIGPGAHSHVNGTR----WWNV 313

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP  + + VR        +E L +  +A E +M+ +R+REG+++++   +         
Sbjct: 314 KHPVPYAQKVRAGESPAAAREVLDTATRAFETIMLMIRVREGLAMRELLAVHDEAQLGAS 373

Query: 359 ERNLQRQGFIERVQFS---------RLRCTQRGMTMLDSVIANLA 394
            R L  Q  IE    +          +R T +G  + D+V   L 
Sbjct: 374 LRWLVSQALIEPDALNSQADPDPEAHVRLTLKGRLLGDAVTRELL 418


>gi|257869207|ref|ZP_05648860.1| coproporphyrinogen III oxidase [Enterococcus gallinarum EG2]
 gi|257803371|gb|EEV32193.1| coproporphyrinogen III oxidase [Enterococcus gallinarum EG2]
          Length = 388

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 183/380 (48%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +I+  L E+          +  +I+ GGG
Sbjct: 14  SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIECLLKEIALTVSKQPITTCETIYIGGG 72

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    + L++ GI +     +  E T+EANP  +  +     +  G++R+S+GVQ+
Sbjct: 73  TPTSLSAAQLDLLITGIHELLPTQTTKEFTVEANPGDLTEDKLLVLKNLGIDRLSMGVQT 132

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ +GR H A +    I L     F  ++ DLIYALP QTM  +   L RA+   
Sbjct: 133 FDNRLLKKIGRKHTAEDVYQTIRLLDKHDFQNITIDLIYALPGQTMESFRDTLTRAIDLG 192

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H ++Y L +E  T+F    + G + LPS+     ++    +  +  GL  YEISN S 
Sbjct: 193 LPHYAMYSLILENKTMFMNWVRQGKMELPSQESETQMFEEAITAMAKAGLSQYEISNFSR 252

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GA   +    ++    I    + +L+ +R++   + E 
Sbjct: 253 PGYESKHNLVYWNNEHYYGFGAGASGYIGQTRYKNFGPI----QHYLRPLREDQLPIHET 308

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E L++  Q +E + +GLR ++G+S   +      + D         L + G++   +  R
Sbjct: 309 ESLTTSNQMEEEMFLGLRKKQGVSKTAFSNKFACSFDSIYGNVVEELSKNGWLV-SEGDR 367

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+ GM + + V     +
Sbjct: 368 VYLTKSGMFIGNDVFEKFLL 387


>gi|87121162|ref|ZP_01077053.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Marinomonas sp. MED121]
 gi|86163654|gb|EAQ64928.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Marinomonas sp. MED121]
          Length = 388

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 132/389 (33%), Positives = 210/389 (53%), Gaps = 19/389 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR-----YKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +YVH P+CVKKCPYCDFNSH         K+ +  ++     +++        R I 
Sbjct: 7   PLSLYVHLPWCVKKCPYCDFNSHQADRFEEEGKLPEAAYLAQLFADLEIDLAYVQGRQIQ 66

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL+       ++ G+ +     SN EIT+EANP + E   F  +RKAG+NR
Sbjct: 67  SMFIGGGTPSLMSADFYYQLMAGLKQKLDFVSNAEITMEANPGTFEQEKFAHFRKAGINR 126

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS +   L+ LGR HN  EA+AA+  +R   F  ++ DL++ LP Q++ Q   +L
Sbjct: 127 LSIGIQSFQPNLLKTLGRIHNREEAMAAVDKSRLAGFDNINIDLMHGLPDQSLEQAMEDL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+  A +HLS YQLTIE  T FY+        LP +N    + ++ Q++   HG   Y
Sbjct: 187 EIAIKLAPEHLSWYQLTIEPNTEFYRRPP----ELPEDNTLWHIQDMGQALLKKHGYAQY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRK 310
           E+S +S +  ++ HNLNYWR+GDY+GIG GAH ++ +   ++      +HP  +L  +  
Sbjct: 243 EVSANSQINKQAKHNLNYWRFGDYLGIGAGAHGKITLADGQIFRTRKTRHPNHYLGNL-- 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGF 367
              A+  KE +  +    EFLM  LRL E   + ++++           + L++   +G 
Sbjct: 301 -PPALCIKESVEKDDMPFEFLMNRLRLFEAFDLDEYQIFCQHKPPESLLKQLEKAVEKGL 359

Query: 368 IERVQ--FSRLRCTQRGMTMLDSVIANLA 394
           +E       R+  T++G   L+ ++    
Sbjct: 360 LEADDWQNKRICTTEKGKLFLNELLEMFL 388


>gi|312140297|ref|YP_004007633.1| oxygen-independent coproporphyrinogen-iii oxidase hemn [Rhodococcus
           equi 103S]
 gi|311889636|emb|CBH48953.1| oxygen-independent coproporphyrinogen-III oxidase HemN [Rhodococcus
           equi 103S]
          Length = 395

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 126/391 (32%), Positives = 191/391 (48%), Gaps = 15/391 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL 65
           + + G G+   G+YVH PFC  +C YCDFN++           ++++++   E+    ++
Sbjct: 14  SALEGVGTRPFGIYVHVPFCATRCGYCDFNTYTAGELGTSASPQSWLEALKRELASAAEI 73

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           TG   + ++F GGGTPSL+    +A +L  +  ++ ++   E+T E+NP S     F   
Sbjct: 74  TGAPKVDTVFVGGGTPSLLGGDGLAEVLGAVQASFGLADGAEVTTESNPESTSPEFFTRL 133

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           R+AG  RISLG+QS  E  LR L R H       AA       F  ++ DLIY  P +T 
Sbjct: 134 REAGFTRISLGMQSAAEHVLRVLDRTHTPGRAVAAAREARAAGFDHVNLDLIYGTPGETD 193

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  L   L   VDH+S Y L +E GT   +  + G+L  P ++V    Y    +  +
Sbjct: 194 RDLDASLDAVLGAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDARLA 253

Query: 245 AHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
             GLH YE+SN +   A    HNL YW  GD+ G GPGAHS V      V     KHP  
Sbjct: 254 DAGLHWYEVSNWAANDASRCRHNLGYWDGGDWWGAGPGAHSHVGG----VRWWNVKHPAR 309

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +      V   E L++E    E +M+ +RLR G+ + D     G +     ER + 
Sbjct: 310 YADRLWAGELPVGGSETLTAEDAHVERVMLTVRLRTGLPLSDL----GDSERGAAER-VV 364

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             G   RV+ + L  T RG  + D+V+ ++ 
Sbjct: 365 ADGL-ARVEGAHLVLTDRGRLLADAVVRDIL 394


>gi|307706871|ref|ZP_07643673.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           mitis SK321]
 gi|307617744|gb|EFN96909.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           mitis SK321]
          Length = 376

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 206/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E Q        + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFQSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKSGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG + ++
Sbjct: 293 RITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIVRDLVQQGLV-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +  R+R T+RG+ + D+V     +
Sbjct: 352 EGERVRMTKRGLFLGDTVAERFIL 375


>gi|332529687|ref|ZP_08405641.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hylemonella gracilis ATCC 19624]
 gi|332040708|gb|EGI77080.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hylemonella gracilis ATCC 19624]
          Length = 397

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 140/382 (36%), Positives = 214/382 (56%), Gaps = 10/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +YVH P+C+KKCPYCDFNSH +   +V ++ ++ + + +++    L   R + SIF 
Sbjct: 20  PLSLYVHLPWCLKKCPYCDFNSHELNPREVPEQRYLDALIADLEASLPLIWGRPVQSIFI 79

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P  I  +L  I     ++++ EIT+EANP + E + F  +R AGV R+S+G
Sbjct: 80  GGGTPSLFSPTGINRLLSDIRARLRLAADCEITLEANPGTFEKDRFAAFRAAGVTRLSVG 139

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS  +  L+ LGR H+ ++A+AA+  A   F   + DL+YALP Q++TQ + +L  ALS
Sbjct: 140 VQSFNDAHLKALGRVHDRAQALAALEEAARSFETWNLDLMYALPGQSLTQLDADLDAALS 199

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +A  HLS+Y LTIE  T F K         P E+ A  + +     T A GL  YE+S +
Sbjct: 200 FAPPHLSVYHLTIEPNTYFAKFPPQT----PDEDTAYAMLDRITERTGASGLGRYEVSAY 255

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV--RKNGHA 314
           +  G    HNLNYW++GDY+GIG GAH ++      +     + P  +++       G A
Sbjct: 256 AQPGHGCRHNLNYWQFGDYLGIGAGAHGKLSFAHRVIRQVRAREPRLYMERALSADPGSA 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
           VV+ E +S      EF++  LRLREG +++D+    G  L    +     +R+G++ R  
Sbjct: 316 VVQDEEVSRADLPFEFMLNALRLREGFALQDFADRTGLALTAIQKPLEEAERKGWLTR-D 374

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +R   T++G   L  + A   
Sbjct: 375 LNRAWPTEQGFDFLSDLQALFL 396


>gi|163749430|ref|ZP_02156678.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella benthica KT99]
 gi|161330839|gb|EDQ01766.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella benthica KT99]
          Length = 378

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 124/383 (32%), Positives = 199/383 (51%), Gaps = 16/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ +I + L +++        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQEYIDALLADLKNDLHYVQGREIHTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  +L G+ +    S  +EIT+EANP ++E ++F+ Y KAGV R+S+GV
Sbjct: 66  GGTPSLFDAAQIERLLTGVNEMIPFSEQIEITMEANPGTLEHDDFEAYSKAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A   A++   R  + DL++ LP Q+  +   ++  A  
Sbjct: 126 QSFSTDKLNLLGRIHGKDEAKVAAQKAQSSGYRSFNLDLMHGLPNQSFEEAMADIDTAAK 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE+ TLF+         LP +     +Y   Q   +  G   YEIS +
Sbjct: 186 LSPPHLSWYQLTIEQNTLFHSKPP----QLPDDEALWHIYEQGQKKLAELGYEQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HN+NYW++GDY+GIG GAH +V +   +  +     KHP+ +L         
Sbjct: 242 AKPGFQCQHNINYWQFGDYLGIGCGAHGKVTLLEQKQILRTVKIKHPKGYLAA----DEY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERV 371
             +   ++ +++  E+LM   RL   I   ++E   G +   +    E+   +   IE  
Sbjct: 298 TFDTIEVTEDERPLEYLMNRFRLMSAIPKAEFEQRTGLSHRVIAQGIEKAKNKTLLIE-- 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             +    T +G   ++ +++   
Sbjct: 356 NETHWELTAKGKMFVNELLSQFC 378


>gi|226360384|ref|YP_002778162.1| coproporphyrinogen III oxidase [Rhodococcus opacus B4]
 gi|226238869|dbj|BAH49217.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodococcus opacus B4]
          Length = 402

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 124/390 (31%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL 65
             + G GS   G+YVH PFC  +C YCDFN+++          +++++    E+    Q+
Sbjct: 22  RALAGVGSRPFGIYVHVPFCATRCGYCDFNTYMAGELGTSASPQSWMEGLRRELDLAAQM 81

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           TG  ++ ++F GGGTPSL+    +A +L  +  ++ +S   E+T E+NP S     F+  
Sbjct: 82  TGAPAVDTVFVGGGTPSLLGGDGLADVLGAVRSSFGLSDGAEVTTESNPESTSPEFFERL 141

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
              G  RISLG+QS  +  L+ L R H    A+AA   AR   F  ++ DLIY  P +  
Sbjct: 142 LAGGFTRISLGMQSAAQHVLKVLDRTHTPGRAVAAALEARAAGFGHVNLDLIYGTPGERD 201

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              ++ L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    +  +
Sbjct: 202 EDLDLSLDAVLSAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDARLA 261

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             GL  YE+SN +  GA   HNL YW  GD+ G GPGAHS V      V     KHP  +
Sbjct: 262 EAGLTWYEVSNWAREGAACRHNLGYWDGGDWWGAGPGAHSHVGG----VRWWNVKHPARY 317

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +      V   E L+ E    E +M+  RLR G+ V + +     +++      +  
Sbjct: 318 ADQLAAGSLPVGGSEQLTGEDVHVERVMLTARLRTGLPVAELD-----DVEKSAAEAVIA 372

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            G + R     L  T+RG  + D+V+ ++ 
Sbjct: 373 DGLLVRA-GEHLVLTERGRLLADAVVRSVL 401


>gi|289771705|ref|ZP_06531083.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           lividans TK24]
 gi|289701904|gb|EFD69333.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           lividans TK24]
          Length = 413

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 195/400 (48%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++
Sbjct: 22  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTLVDEVR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + EIT EANP SV+
Sbjct: 82  LARKVLGDDPREVRTVFVGGGTPTLLAAGDLVRMLGAIRDEFGLAPDAEITTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLATLRAGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFDHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 202 GTPGESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + +   SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IAEEALSAAGYDWYEVSNWATSDAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +         +E L+ E +  E +++ LRLREG+ +        R   +
Sbjct: 318 NVKHPGAYAGALAAGKSPGAGREILTDEDRRVERILLELRLREGVPLSLL-----REAGL 372

Query: 357 ECERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
              R    +G ++    +      T RG  + D+V+ +L 
Sbjct: 373 AASRRALSEGLLQEGPYEAGSAVLTLRGRLLADAVVRDLV 412


>gi|269794655|ref|YP_003314110.1| coproporphyrinogen III oxidase, anaerobic [Sanguibacter keddieii
           DSM 10542]
 gi|269096840|gb|ACZ21276.1| coproporphyrinogen III oxidase, anaerobic [Sanguibacter keddieii
           DSM 10542]
          Length = 418

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 121/399 (30%), Positives = 194/399 (48%), Gaps = 22/399 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQL--- 65
           +G      GVY+H PFC  +C YCDFN++      G   Q  +  + ++E++   +L   
Sbjct: 23  SGAADRRFGVYMHVPFCTVRCGYCDFNTYTASELGGGASQSAYATTAVSEIEMAGRLMDA 82

Query: 66  --TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R +S++F GGGTP+L+  +++A +L  +   W ++ +VE+T EANP SV   +  
Sbjct: 83  AGLPRREVSTVFVGGGTPTLLPARDLATMLAAVRSTWGLADDVEVTTEANPDSVTPESLA 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
               AG  R+S G+QS     L  L R H+       +  AR++   +S DLIY  P +T
Sbjct: 143 VLADAGFTRVSFGMQSAVPSVLATLERTHDPRRIPDVVRWARDVGLDVSLDLIYGTPGET 202

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   ++ AL+  VDH+S Y L +E+GT      + G L LP+E+     Y L   + 
Sbjct: 203 LDDWRTSVESALATGVDHVSAYALVVEQGTKMAAQVRRGQLTLPNEDDQAAKYELADDLL 262

Query: 244 SAHGLHAYEISNHSFLG----AESLHNLNYWRYGDYIGIGPGAHSRVKV---GSHRVAIS 296
           +  GL  YE+SN +           HNL YWR  D+ G+GPGAHS +     G+  +   
Sbjct: 263 TEAGLGWYEVSNWARTVDGVQRACRHNLAYWRGDDWWGVGPGAHSYLGSDVPGTRGLRWW 322

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP  +   + +       +E +  +    E +M+G+RLREG +  D    A +    
Sbjct: 323 NVKHPVRYANRLAEGLSPSAGQETIGDDSAQLERVMLGVRLREGFATADLSPRARK---- 378

Query: 357 ECERNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANL 393
                    G ++       R+  T+RG  + D+V+ +L
Sbjct: 379 -AVAQHVADGLVDGRAAIAGRVVLTRRGRLLADTVVRDL 416


>gi|293365721|ref|ZP_06612430.1| coproporphyrinogen dehydrogenase [Streptococcus oralis ATCC 35037]
 gi|307703664|ref|ZP_07640606.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus oralis ATCC 35037]
 gi|291316089|gb|EFE56533.1| coproporphyrinogen dehydrogenase [Streptococcus oralis ATCC 35037]
 gi|307623071|gb|EFO02066.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus oralis ATCC 35037]
          Length = 376

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 126/384 (32%), Positives = 203/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E          + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFHSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + L+LDG+ KN   S   E+TIEANP  ++ +     +++ VNR+SL
Sbjct: 58  IGGGTPTALSAPQLELLLDGLTKNLDSSVLEELTIEANPGDLDADKIAVLKQSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMAQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E +  +++    S     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIISELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLNAVEA-GDA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + +E L+ ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +QG + ++
Sbjct: 293 RITEENLTQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIIRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + D+V     +
Sbjct: 352 DGDRVRMTKRGLFLGDTVAERFIL 375


>gi|254281851|ref|ZP_04956819.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR51-B]
 gi|219678054|gb|EED34403.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR51-B]
          Length = 383

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 138/383 (36%), Positives = 207/383 (54%), Gaps = 10/383 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               L +YVH P+C +KCPYCDFNSH       +  ++ + L +++   Q    R I+SI
Sbjct: 6   DPPPLALYVHIPWCERKCPYCDFNSHEGFKPDLEPVYVAALLADIEAQEQWIDSRPIASI 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL     I  +LDG+A+   + +  EIT+E NP S E + + GYR AGVNR+S
Sbjct: 66  FIGGGTPSLFSADAIGKLLDGVARVAHLPAGTEITLETNPGSAEASRYIGYRAAGVNRLS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS +++ L  LGR H AS A  A  LAR+  F R + DL++ LP Q++     +L +
Sbjct: 126 IGVQSFDDKQLTRLGRIHTASNARLATELARSAGFDRFNIDLMHGLPNQSVESALDDLNQ 185

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+   DHLS YQLTIE+ T F+K       +LP E    D+    +++    G   YE+
Sbjct: 186 ALACGGDHLSWYQLTIERNTEFFKRPP----ILPQEKALGDIQERGEALLLGQGFEQYEV 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S  +  G +  HNLNYW++GDY+G+G GAH ++   +  +     + P  +L+ ++    
Sbjct: 242 SAFARPGQQCHHNLNYWQFGDYLGVGAGAHGKITDSTGILRTQRTRLPRDYLQSIKDQAP 301

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
              ++  +++   A EF+M  LRLR+G S        G       E  R+L+ +G I  +
Sbjct: 302 P--KQTRVAASDLAGEFMMNALRLRQGFSTDLLLQRTGLGTGSVNETLRSLESKGLIA-I 358

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             S +  T  G   LD V+    
Sbjct: 359 GDSNISATALGWRFLDDVVGEFF 381


>gi|302331204|gb|ADL21398.1| Coproporphyrinogen III oxidase [Corynebacterium pseudotuberculosis
           1002]
          Length = 384

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 122/390 (31%), Positives = 192/390 (49%), Gaps = 18/390 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL----T 66
           Q S   GVY+H PFC  +C YCDFN++           E+++ +   E+    Q+     
Sbjct: 3   QKSTPFGVYIHVPFCSSRCGYCDFNTYTPGELGSSASPESYLNALEIELDLAAQIRASSG 62

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  S++F GGGTPS++    +  +L  +  +  ++   E+T E+NP S     F    
Sbjct: 63  DTREASTVFVGGGTPSMLGAAGLDRVLLAVRSSTGIAPGAEVTTESNPESTSPEFFHSLL 122

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
           ++G  R+SLG+QS     L+ L R H    A AA   A    F  ++ D+IY  P +T  
Sbjct: 123 ESGFTRVSLGMQSASSSVLKVLERKHTPGRAFAAAKEALAAGFNHVNLDMIYGTPTETNE 182

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                L R +   VDH+S Y L +E GT   +  + G+L  P E+   D Y +       
Sbjct: 183 DVRETLSRVVDTGVDHVSAYSLIVEDGTAMARKVRRGELPPPDEDTYADRYWMIDQALRQ 242

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G E  HN+ YWR GD+ G GPGAHS +            KHP S+ 
Sbjct: 243 EGFSWYEVSNWAREGGECQHNMGYWRDGDWWGAGPGAHSHIAQRRFHNI----KHPASYS 298

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           K +      V E+E LS  ++ +E +M+GLRL+EG+S+ ++        +++      +Q
Sbjct: 299 KALLAGELPVKEEETLSDVERHEEKVMLGLRLKEGVSIAEFSA-----GELDVIEPRVKQ 353

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G +  +   R+R T++   + D +IA++ V
Sbjct: 354 GLLH-MNAGRVRLTEKSRLLADGIIADILV 382


>gi|82701203|ref|YP_410769.1| coproporphyrinogen III oxidase [Nitrosospira multiformis ATCC
           25196]
 gi|82409268|gb|ABB73377.1| coproporphyrinogen III oxidase, anaerobic [Nitrosospira multiformis
           ATCC 25196]
          Length = 408

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 127/385 (32%), Positives = 205/385 (53%), Gaps = 13/385 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +Y+H P+C+KKCPYCDFNS+  R + G   +  ++ + + +++        R + SI
Sbjct: 23  PLSLYIHIPWCMKKCPYCDFNSYEVRDRSGGMPEAEYVAALIRDLEASLPQIWGRKVISI 82

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL  P +I  IL  +     +    EIT+EANP + E   F  ++ AG+NR+S
Sbjct: 83  FFGGGTPSLFSPHSIDGILAAVRALLPLEHLAEITLEANPGTFEAQRFADFQAAGINRLS 142

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS   + L  LGR H+  +A  AI +A+  F  ++ DL+Y LP QT+ +   +++ A
Sbjct: 143 IGIQSFNARHLASLGRIHDGKDARRAIEIAQKNFDNINLDLMYGLPNQTLEEAREDIETA 202

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +++ V H+S Y L +E  TLF++        LP + +  D+  + +   +  G   YE S
Sbjct: 203 IAHGVQHISAYHLALEPNTLFHRYPP----SLPDDELTADMQAMIEQTLAREGYANYETS 258

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-KMVRK--N 311
             +  G ES HN+NYW +GDY+GIG GAHS++      V     + P+ +L K V +  +
Sbjct: 259 AFARPGRESRHNMNYWLFGDYLGIGAGAHSKISFRDRIVRQMRYRQPKEYLIKSVPEMAS 318

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
              V+E+  +    +A EF+M  LRL +G + + +    G  L          +R+  I 
Sbjct: 319 EPPVMEQHEVGRNDRAFEFVMNALRLTDGFAPQMFIERTGLALTHIQRQLDEAERRQLIT 378

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           R  F R+  T  G   L+ ++    
Sbjct: 379 R-DFQRIAPTFAGRRFLNDLLQIFL 402


>gi|241563370|ref|XP_002401676.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
 gi|215501868|gb|EEC11362.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
          Length = 402

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 159/385 (41%), Positives = 236/385 (61%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 21  ANDLSIYIHWPFCLSKCPYCDFNSHVAGN-IDHNQWLKSYETEIEYFKAIIQNKYIKSIF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EITIE NP+S E   F+ ++ AG+NR+S+
Sbjct: 80  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITIETNPTSFETEKFKAFKSAGINRVSI 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  +  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 140 GVQSLKEDDLKKLGRTHDALQAIKTVEAANTIFPRVSFDLIYARSGQKLKDWQEELKQAM 199

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 200 QFANGHISLYQLTIEKGTPFYKLFKEGNLILPHSDEAAEMYEWTNHYLESKKYFRYEISN 259

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +  E LHNL YW Y +Y+GIGPGAHSR+   S  V AI +   PE WL  V      
Sbjct: 260 YAQVEHECLHNLAYWNYNNYLGIGPGAHSRIIDASSSVLAIMMWHKPEKWLDSVNTKNVG 319

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q Q  I+ 
Sbjct: 320 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQSQDLIKL 379

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 380 DKN--IYLTDKGLMLHSYIVPRLII 402


>gi|169829251|ref|YP_001699409.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41]
 gi|168993739|gb|ACA41279.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Lysinibacillus
           sphaericus C3-41]
          Length = 381

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 193/382 (50%), Gaps = 12/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFG 77
           GVY+H PFC + C YCDFN    + +   + +I++   EM    Q    G R I +IF G
Sbjct: 4   GVYIHIPFCHQICNYCDFNKFYFKNQ-PVDEYIEALGKEMALATQKNPEGFRHIETIFLG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + PQ +  +L  I     ++S  E T EANP  +     Q     GVNR+S+GV
Sbjct: 63  GGTPTALSPQQLDKLLTLIHTYIPMNSVTEFTSEANPDELSAEKLQVLFDGGVNRLSMGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L+ +GR H+         LA+ I F  +S DL+Y LP QTM QW+  L++AL 
Sbjct: 123 QSFNQELLQKIGRTHSNEHVYKTTALAKKIGFQNISIDLMYGLPGQTMAQWKDSLEKALV 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H S Y L +E  T+FY  +  G L+LP+E++  D+Y++       HGL  YEISN 
Sbjct: 183 LDLPHFSAYSLIVEPKTIFYNQYAKGKLLLPTEDLEADMYDVLMQQMELHGLQQYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW   +Y G G GAH  +    +     ++K    +++ V      +V
Sbjct: 243 AKPGYHSEHNKIYWDNDEYAGFGAGAHGYLAGVRYSNHGPLKK----YMETVLAGELPIV 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
            +  +S  ++ +E + +GLR  +G+  + +E      +        + L  +G +E    
Sbjct: 299 HEHEVSQAEKREEQMFLGLRKTDGVKHRIYEEKLKTPIVAHYDSVLKELVSKGLLEHDDI 358

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +R T++G  + + V     +
Sbjct: 359 G-VRLTRKGRFVGNEVFQQFLL 379


>gi|306833861|ref|ZP_07466986.1| coproporphyrinogen dehydrogenase [Streptococcus bovis ATCC 700338]
 gi|304424055|gb|EFM27196.1| coproporphyrinogen dehydrogenase [Streptococcus bovis ATCC 700338]
          Length = 376

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++Q+ + E +          + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLQALIREFESY----DIEQLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  Q +  +L  + K+  +S   E TIEANP  +  +  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSITAQQLDYLLTDLTKHLDLSVLEEFTIEANPGDLTDDKIEVLKKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN S+  + I HL    F  +S DLIYALP QTM   +  + +A
Sbjct: 118 GVQTFNDKQLKRIGRSHNESQIYSTIDHLKTAGFDNISIDLIYALPGQTMEDVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP E++  +++    +   A+G   YEIS
Sbjct: 178 IALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPQEDLEAEMFEYIIAELEANGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ ++  +E L +GLR + G+S+  +E   G + +    +    L + G +   
Sbjct: 293 RLSEEVLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFEERYGQIVTELCQHGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DDEVVRMTKKGLFLGDTVAERFIL 375


>gi|82778273|ref|YP_404622.1| coproporphyrinogen III oxidase [Shigella dysenteriae Sd197]
 gi|309785217|ref|ZP_07679848.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella dysenteriae 1617]
 gi|81242421|gb|ABB63131.1| putative oxidase [Shigella dysenteriae Sd197]
 gi|308926337|gb|EFP71813.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Shigella dysenteriae 1617]
          Length = 378

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 129/370 (34%), Positives = 200/370 (54%), Gaps = 14/370 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAHAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E+ L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+ 
Sbjct: 126 QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF         VLP ++   D++     + +A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +
Sbjct: 242 AKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +  + +  +  EF M   RL E     ++    G   D+          QG++     
Sbjct: 297 ESQRDVEAADKPFEFFMNRFRLLEAAPRVEFSAYTGLCEDVIRPQLDEAIAQGYLTECA- 355

Query: 374 SRLRCTQRGM 383
              + T+ G 
Sbjct: 356 DYWQITEHGK 365


>gi|302869302|ref|YP_003837939.1| oxygen-independent coproporphyrinogen III oxidase [Micromonospora
           aurantiaca ATCC 27029]
 gi|302572161|gb|ADL48363.1| oxygen-independent coproporphyrinogen III oxidase [Micromonospora
           aurantiaca ATCC 27029]
          Length = 409

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 129/399 (32%), Positives = 199/399 (49%), Gaps = 23/399 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
                  G+   GVYVH PFC  +C YCDFN++      G   +E +  S L E+    +
Sbjct: 21  ATARRAVGARGFGVYVHVPFCASRCGYCDFNTYTASELGGGASRETYADSVLAELALAAR 80

Query: 65  LTG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           + G   P  + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   +
Sbjct: 81  VLGDSPPPRVDTVFVGGGTPTLLPADDLARILDGIDRVWGLAADAEVTTEANPESVSPES 140

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALP 180
            +  R AG  RISLG+QS     L  L R H+A  A  AA+      F  ++ DLIY  P
Sbjct: 141 LKTLRAAGYTRISLGMQSAAPGVLAVLDRRHSAGRATAAALEARDAGFEHVNLDLIYGTP 200

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T   +   L + +   VDH+S Y L +E GT      + G+L  PS++VA D Y   +
Sbjct: 201 GETADDFAASLAQVVDAGVDHVSAYALIVEDGTRLAARMRRGELPYPSDDVAADRYLAAE 260

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +     G   YE+SN +    A   HNL YW   D+ G+GPGAHS V      V     K
Sbjct: 261 AALGEAGFSWYEVSNWARSAAAACRHNLLYWTGADWWGLGPGAHSHVGG----VRWWNVK 316

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--LAGRNLDIE 357
           HP ++   + +     + +E L+ ++Q  E +M+ +RL  G+ +   +    AG      
Sbjct: 317 HPSAYAARLAEGASPALAREQLTPDEQHMEDVMLRVRLASGLPLDVLDEPGRAG------ 370

Query: 358 CERNLQRQGFIERVQFSR--LRCTQRGMTMLDSVIANLA 394
                +  G ++   ++R  +  T RG  + D+V+ +L 
Sbjct: 371 -AERARDAGLLDAGAYARGLVVLTLRGRLLADAVVRDLL 408


>gi|38234293|ref|NP_940060.1| coproporphyrinogen III oxidase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38200556|emb|CAE50251.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium diphtheriae]
          Length = 377

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 194/387 (50%), Gaps = 20/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSIS 72
           S+S GVYVH PFC  +C YCDFN++      G    E+++ +   E++        R  +
Sbjct: 2   SDSFGVYVHVPFCSSRCGYCDFNTYTPGELGGTASPESYLDALEKELELAAASGTTRPAT 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTPS++    +  +L  +     ++   E+T E+NP +     F     AG NR
Sbjct: 62  TVFIGGGTPSMLGASGLTRVLSAVRNTIGIAPGAEVTTESNPETTSPEFFSELLDAGYNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLG+QS     LR L R H    A  A   A N  F  ++ D+IY  P +T     + L
Sbjct: 122 ISLGMQSASSSVLRVLERKHTPGRAFDAALEAMNAGFLHVNLDMIYGTPTETDDDVRLTL 181

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +RAL   VDH+S Y L +E GT   +    G L  P+E+V  D Y L  +   A G   Y
Sbjct: 182 ERALDTGVDHISAYSLIVEDGTAMARKVHKGQLPPPNEDVYADRYGLIDTALRAQGFDWY 241

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G E  HNL YW  GD+ G GPGAHS +            KHP ++ + +   
Sbjct: 242 EVSNWAKPGGECQHNLGYWLDGDWWGAGPGAHSHIASRRFFNV----KHPSTYAQHLADG 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--GF-I 368
              + E+E L S ++ +E +M+GLRLR+G+ +  +          E ER +  +  G  +
Sbjct: 298 QLPIKEEELLDSTERHEESVMLGLRLRQGLELSRFT---------EAERAVIEKYVGLKL 348

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +   R+  T +G  ++D +IA++ V
Sbjct: 349 LHIYDGRVASTLQGRLLIDGIIADILV 375


>gi|300858954|ref|YP_003783937.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686408|gb|ADK29330.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206654|gb|ADL10996.1| Oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis C231]
 gi|308276897|gb|ADO26796.1| oxygen-independent Coproporphyrinogen III oxidase [Corynebacterium
           pseudotuberculosis I19]
          Length = 384

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 122/390 (31%), Positives = 193/390 (49%), Gaps = 18/390 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL----T 66
           Q S   GVY+H PFC  +C YCDFN++           E+++ +   E+    Q+     
Sbjct: 3   QKSTPFGVYIHVPFCSSRCGYCDFNTYTPGELGSSASPESYLNALEIELDLAAQIRASSG 62

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R  S++F GGGTPS++    +  +L  +  +  ++   E+T E+NP S     F    
Sbjct: 63  DTREASTVFVGGGTPSMLGAAGLDRVLLAVRSSTGIAPGAEVTTESNPESTSPEFFHSLL 122

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
           ++G  R+SLG+QS     L+ L R H    A AA   A    F  ++ D+IY  P +T  
Sbjct: 123 ESGFTRVSLGMQSASSSVLKVLERKHTPGRAFAAAKEALAAGFNHVNLDMIYGTPTETNE 182

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                L R +   VDH+S Y L +E GT   +  + G+L  P E+   D Y +       
Sbjct: 183 DVRETLSRVVDTGVDHVSAYSLIVEDGTAMARKVRRGELPPPDEDTYADRYWMIDQALRQ 242

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G E  HN+ YWR GD+ G GPGAHS +            KHP S+ 
Sbjct: 243 EGFSWYEVSNWAREGGECQHNMGYWRDGDWWGAGPGAHSHIAQRRFHNI----KHPASYS 298

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           K +      V E+E LS  ++ +E +M+GLRL+EG+S+ ++        +++   +  +Q
Sbjct: 299 KALLAGELPVKEEETLSDVERHEEKVMLGLRLKEGVSIAEFSA-----GELDVIESRVKQ 353

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G +  +   R+R T++   + D +IA++ V
Sbjct: 354 GLLH-MNAGRVRLTEKSRLLADGIIADILV 382


>gi|134300339|ref|YP_001113835.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfotomaculum reducens MI-1]
 gi|134053039|gb|ABO51010.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfotomaculum reducens MI-1]
          Length = 378

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 213/382 (55%), Gaps = 10/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIF 75
           S+GVY+H PFCV+KC YCDF S+    +     +++    E+ +  +  L   ++I++IF
Sbjct: 2   SIGVYIHVPFCVRKCLYCDFTSYPVNREQ-VSLYLRGLEKEIAYYSESLLLKEKTINTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A IL+ + +++ ++++ EIT EANP +V  +  +  R AG NR+SL
Sbjct: 61  VGGGTPTSLMSGQLASILERLDRSFYIANDAEITTEANPGTVNFSYLKDLRAAGFNRLSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  ++ L  +GR HN  +A AA+  AR   F  ++ DLI+ LPKQT+ QW+  L   
Sbjct: 121 GVQSTHQELLNEIGRIHNFEQAKAAVWQARQASFHNINLDLIFGLPKQTVKQWQQSLTEI 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    H+S Y L +E+GT      + G L    E   +++Y L   I  + G   YEIS
Sbjct: 181 INLEPQHISCYGLQLEEGTPLTCSIEQGKLEPCQEEDELEMYQLAIRILGSMGYEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +  HNL YW  G+Y+G+GP AHS +     +V      + E +  ++++    
Sbjct: 241 NFARPGYQCRHNLLYWHNGEYLGLGPAAHSHLN----QVRWGNVGNIEQYASLLKRGDIP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQ 372
             EK  LS  +Q +E + +GLR+ +G+ ++++ M  G  +    ++ + R  Q  + +++
Sbjct: 297 REEKTILSVREQMEETVFLGLRMLKGLKLENFRMRFGLPITKVFKKEISRMEQLGLVKLE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              L+ T++G+ + + V A   
Sbjct: 357 DGYLKLTEKGLPLANQVFAEFV 378


>gi|294139808|ref|YP_003555786.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           violacea DSS12]
 gi|293326277|dbj|BAJ01008.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella violacea DSS12]
          Length = 378

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 120/382 (31%), Positives = 198/382 (51%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH +  ++ Q+ ++ + L +++        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQNGELPQQEYVDALLADLRNDLHYVQEREIHTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +   I  +L G+ +    S  +EIT+EANP ++E ++F+ Y  AGV R+S+GV
Sbjct: 66  GGTPSLFDAAQIERLLTGVNQMIPFSEQIEITMEANPGTLEHDDFEAYSNAGVTRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H   EA  A   A++   R  + DL++ LP Q+  +   ++  A  
Sbjct: 126 QSFSTDKLNLLGRIHGKDEAEVAARKAQSSGYRSFNLDLMHGLPNQSFEEAMADIDTAAE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE+ TLF+         LP +     +Y   Q   +  G   YEIS +
Sbjct: 186 LAPPHLSWYQLTIEQNTLFHSKPP----QLPDDEALWHIYEQGQKKLADLGYEQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           +  G +  HN+NYW++GDY+GIG GAH +V +      +     KHP+ +L         
Sbjct: 242 AKPGFQCQHNINYWQFGDYLGIGCGAHGKVTLLEQNQILRTVKIKHPKGYLAA----DEY 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--LDIECERNLQRQGFIERVQ 372
             +   ++ +++  E+LM   RL   I   ++E   G +  +  +     +++  +   +
Sbjct: 298 TFDTVEVTEDERPLEYLMNRFRLMSAIPKTEFEQRTGLSHRVIAQGIEKAKQKTLLTENE 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +    T +G   ++ +++   
Sbjct: 358 -THWELTAKGKMFVNELLSQFC 378


>gi|194397558|ref|YP_002038057.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae G54]
 gi|194357225|gb|ACF55673.1| Oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae G54]
          Length = 376

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IELDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + ++ LS ++Q +E + +GLR + G+S+  +E   G++      E  R+L +QG + ++
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T+RG+ + D+V     +
Sbjct: 352 EGDHVRMTKRGLFLGDTVAERFIL 375


>gi|296137100|ref|YP_003644342.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
 gi|295797222|gb|ADG32012.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
          Length = 429

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 135/383 (35%), Positives = 212/383 (55%), Gaps = 13/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+KKCPYCDFNSH  R    + ++ ++ +   ++     L   R + S+F
Sbjct: 46  PLSLYVHLPWCLKKCPYCDFNSHEWRAGGSIPEQAYLAALRADLDAALPLVWGRRVISVF 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I  ++  +     + ++ EIT+EANP + E + F  + +AGVNR+S+
Sbjct: 106 IGGGTPSLFSPEAIDQLITDVRARLPLVADAEITLEANPGTFERDRFAAFAQAGVNRLSI 165

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS ++  LR LGR H+A +A  A+  A   F   + DL++ALP+Q M   + ++  AL
Sbjct: 166 GVQSFDDDRLRALGRVHDARQAHDAVAEAARHFASFNLDLMFALPQQDMPGCKADVHEAL 225

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLSLYQLT+E  TLF +        LP +++  D+ +    +  A GL  YE+S 
Sbjct: 226 AHQPPHLSLYQLTLEPNTLFARHPP----PLPDDDLTADMQHAVADLAEAAGLQRYEVSA 281

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G    HNLNYW++GDY+GIG GAHS++      V  +  +HP+ +++   + G AV
Sbjct: 282 YAAPGHRCRHNLNYWQFGDYVGIGAGAHSKLTFAHRIVRQTRWRHPQRYMEQAAQ-GLAV 340

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
             +  +S      EF++  LRLREG+    +    G       E+ L   Q +G +    
Sbjct: 341 ETEVEVSRSDLPFEFMLNALRLREGVRADLFAERTGLPPS-AIEKPLQTAQSKGLL-IDD 398

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              LR T  G  ML++ +  L +
Sbjct: 399 ADVLRTTPLGFDMLNNAL-ELFL 420


>gi|312127398|ref|YP_003992272.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777417|gb|ADQ06903.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 376

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/381 (34%), Positives = 211/381 (55%), Gaps = 9/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC +KC YCDF S+          +  +  +E+ + ++      I +I+ 
Sbjct: 2   RNIGLYIHVPFCKRKCYYCDFVSYENVNDDVIFAYFSALESELIYYKE-NYEIEIDTIYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I  + I  +L+ I  N+ + SN EITIEANP S+     Q Y  AGVNR+S+G
Sbjct: 61  GGGTPSSISAKYILELLEFIYSNFKIKSNCEITIEANPESITQEKLQSYSLAGVNRLSVG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  LR +GR H++  A+  + +    F   S D+I  LP QT   +   L   L 
Sbjct: 121 IQSLNDVELRAIGRVHDSEVALKILSVVPLYFVNFSVDVITGLPYQTFKSFMQTLNTLLE 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  H+S+Y L IE+GT  ++ +++   +LPSE+    ++   + I S  GL+ YEISN 
Sbjct: 181 FSPPHVSIYSLKIEEGTPLFERYEEYKSLLPSEDEERRMFWWARRILSEVGLYHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW   +YIG+G  AHS  +   +    +I +    + K +++NG AV 
Sbjct: 241 AKKGFECKHNLKYWNVEEYIGVGCAAHSFFEGYRYYNTSNINE----YAKKIKENGLAVE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
            +EF+S+E+   EF+++GLR  EG S+ ++    G   + +       L++ G IE V  
Sbjct: 297 GEEFISNEESEKEFIILGLRKIEGFSLDEFRERFGVEFERKYNSQIEKLKKYGLIE-VNN 355

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           SRL+ T+RG+ + + V     
Sbjct: 356 SRLKLTERGIDLANLVWREFV 376


>gi|301155284|emb|CBW14750.1| predicted oxidoreductase [Haemophilus parainfluenzae T3T1]
          Length = 382

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 131/374 (35%), Positives = 204/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + ++ ++Q  + +++      +     R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHAQKGAIPEQEYVQHLIADLEAGLDKYQASIQNRPLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++I L+L  I +    S N+EIT+EANP +VE   F+GY  AGV RI
Sbjct: 66  IFIGGGTPSLFSAESIKLLLAEIQRRIPFSENIEITMEANPGTVEAERFKGYVDAGVTRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A+ LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVSLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  A  HLS YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELAPPHLSWYQLTIEPNTMFAYRPP----KLPDDDELWDIFEQGHQLLTEAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++      +   S  KHP+ +L+     
Sbjct: 242 TSAYAKPGFQCQHNLNYWRFGDYLAIGCGAHGKLTFPDGDILRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +A EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVEKNDRAFEFFMNRFRLLEAVPKQEFEHYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
                  + T+ G 
Sbjct: 357 ET-PDYWQITEHGK 369


>gi|91205960|ref|YP_538315.1| coproporphyrinogen III oxidase [Rickettsia bellii RML369-C]
 gi|157826679|ref|YP_001495743.1| coproporphyrinogen III oxidase [Rickettsia bellii OSU 85-389]
 gi|91069504|gb|ABE05226.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia bellii RML369-C]
 gi|157801983|gb|ABV78706.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia bellii OSU 85-389]
          Length = 388

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 159/389 (40%), Positives = 235/389 (60%), Gaps = 8/389 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M    +N L +Y+HWPFC+ KCPYCDFNSH+    +  +N+++S+  E+++ + +   + 
Sbjct: 1   MKEVKANDLSIYIHWPFCLSKCPYCDFNSHIA-NSIDDDNWLKSYEKEIEYFKDIIQNKY 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SIFFGGGTPSL+ P+ +  I++ I+    +    EIT+EANP+S E   F+ ++ AG+
Sbjct: 60  IRSIFFGGGTPSLMNPKIVEGIINKISGFARIDKQTEITLEANPTSFETEKFKAFKLAGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+S+GVQSL E  L+ LGR H++ +AI  I  A  IFPR+SFDLIYA   Q +  W+ E
Sbjct: 120 NRVSIGVQSLRENDLKKLGRTHDSLQAIKTIESASKIFPRVSFDLIYARSGQELKDWQQE 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+     H+SLYQLTIEKGT FYK+  DG+L+LP+ ++A ++Y  T     +     
Sbjct: 180 LKQAMELVTGHISLYQLTIEKGTPFYKLFHDGNLILPNSDLAAEMYEWTNDYLESQKYFR 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVR 309
           YEISN++  G E +HNL YW Y DY+GIGPGAHSR ++  S   AI +   PE WL+ V 
Sbjct: 240 YEISNYAKKGQECVHNLTYWNYNDYLGIGPGAHSRIIENPSSVSAIMMWHKPEKWLEAVN 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQ 365
              + V     L+ ++  +E LMMGLRL++GI++   E          LDI    + Q  
Sbjct: 300 NKNNGVQTNVKLTKQEIIEEILMMGLRLKDGINISALEQKIDAKLENILDISSLNHYQEL 359

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             I       +  T +G+ +   ++  L 
Sbjct: 360 DLIRLDDN--IYLTYKGLMLHSYIVPRLL 386


>gi|312866178|ref|ZP_07726399.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus downei F0415]
 gi|311098582|gb|EFQ56805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus downei F0415]
          Length = 377

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 213/384 (55%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++Q+ L E ++       +++ +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLQALLEEFRFY----DIKNLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L G+ ++  +S+  E TIEANP  +  +  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTALSASQLEVLLLGLQESLDLSALEEFTIEANPGDLTADKVEVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+HN ++   ++  L +  F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKELKRIGRSHNEAQIYQSVSALKQAGFDNISIDLIYALPGQTMDQVKTNVKKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  + HLSLY L +E  T+F    + G L LP+E+V  D++         HG   YEIS
Sbjct: 178 LALDIPHLSLYSLILENHTVFMNKMRRGRLHLPNEDVESDMFTYIIDELEKHGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + GHA
Sbjct: 238 NFTKPGYESRHNLVYWDNVEYYGLGAGASGYLDGVRYRNRGPI----QHYLKAVAQAGHA 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+  +Q +E + +GLR + GIS+  ++     +      +   +L   G + + 
Sbjct: 294 RLHEEKLTKSEQMEEEIFLGLRKKSGISINRFQEKFQEDFQQRYGQIVADLLADGLL-QT 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           Q  ++R T+RG+ + D+V     +
Sbjct: 353 QGDQIRMTKRGLFLGDTVAEKFFI 376


>gi|304316640|ref|YP_003851785.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778142|gb|ADL68701.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 376

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 111/377 (29%), Positives = 208/377 (55%), Gaps = 8/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC +KC YCDFNS+    K   E F  + + E++  +        +SI+ GGG
Sbjct: 5   GIYIHIPFCKRKCYYCDFNSYANMEKS-LEPFKDAIMREIRNRKDELKD-IFTSIYIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++ P  I  ILD I K + +S++ EI+IE NP  ++    + Y++ G+NRIS+G+Q+
Sbjct: 63  TPNVLPPFYIENILDEIYKYYDISNDAEISIELNPGLIDDEKLKTYKRIGINRISIGLQA 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +++ L+ +GR H   + I    +A   F  ++ D++YALP Q    ++  L   +S   
Sbjct: 123 WQDKLLKKIGRIHTIHDFIENYDMATKYFDNINIDIMYALPDQIFDDFKETLSNVVSLKP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +E+GT+FYK++++  +    +   + +Y+        +G   YEISN++  
Sbjct: 183 THISCYGLILEEGTVFYKLYEENKIKPADDEFEMMMYHYGIEFLQKNGYKHYEISNYAIP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HN  YW+   YIG GPGA+S V            K  + +++M+ + G+A+ + +
Sbjct: 243 GYECRHNTLYWKDLQYIGFGPGAYSFVDNRRCGNV----KDIKKYIEMINRTGYAIEDID 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ-GF-IERVQFSRLR 377
            L  + +  E++ +GLR+ +G+  +D++   G+++    +  + +  G  +   +   ++
Sbjct: 299 VLDEKDKMSEYMFLGLRMMDGVYDRDFKTRFGKSMFSIFKNAIDKNIGLNLLIREGDNIK 358

Query: 378 CTQRGMTMLDSVIANLA 394
            TQ+G+ + ++V  +  
Sbjct: 359 LTQKGIDVSNNVFEDFL 375


>gi|294789570|ref|ZP_06754805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Simonsiella muelleri ATCC 29453]
 gi|294482507|gb|EFG30199.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Simonsiella muelleri ATCC 29453]
          Length = 387

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 214/380 (56%), Gaps = 7/380 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  +  + ++ +I + L ++Q        R I +IF G
Sbjct: 12  PLSLYIHIPWCIQKCPYCDFNSHKIKTTLDEQTYINALLVDLQSELPYFWGRQIQTIFIG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+ +  +I  +L G+     ++   EIT+EANPS+ E N FQG++ AG+NR+S+GV
Sbjct: 72  GGTPSVFQADSINQLLSGLRALVKLNPEAEITLEANPSTFERNKFQGFKDAGINRLSIGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS ++  L+ LGR HNA+EA AAI  A  IF R++ DL+YALP+QT+     +++ A+  
Sbjct: 132 QSFDDTQLKTLGRIHNATEAQAAIETACQIFERVNIDLMYALPRQTVQAALHDVRTAIGL 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S YQLT+E  T F          LP ++ A D+ +   +  +  G   YE S  S
Sbjct: 192 GVSHISAYQLTLEPNTPFGHTPPQ---GLPEDDAAQDIEDAIHNELANVGFTQYETSAFS 248

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                 + HN+NYW++GDY+GIG GAH ++    H    + ++HP  +L  ++ N +  +
Sbjct: 249 KHPNQRARHNINYWQFGDYVGIGAGAHGKLSHHKHIERTTRKRHPNDYLAAMQHNPNDAI 308

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E++ +       EF+M  LRL +G+    +    G ++    +  +  Q++  ++     
Sbjct: 309 ERKIIQPTDLPFEFMMNALRLVDGVPTTYFTERTGVSIAKISQQIQIAQQKNLLDSNPM- 367

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            LR T+ G   L+ +I    
Sbjct: 368 FLRPTELGRRFLNDLIEIFL 387


>gi|332187820|ref|ZP_08389554.1| radical SAM superfamily protein [Sphingomonas sp. S17]
 gi|332012170|gb|EGI54241.1| radical SAM superfamily protein [Sphingomonas sp. S17]
          Length = 387

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 184/379 (48%), Positives = 241/379 (63%), Gaps = 8/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVHWPFCV KCPYCDFNSHV R  V Q  +  + L ++     +   R ++SIFFGG
Sbjct: 12  LALYVHWPFCVSKCPYCDFNSHV-RESVDQAAWADALLADLAHEAAMLPGRQLTSIFFGG 70

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A ILD   ++W  +  +EIT+EANPSSVE   F     AGVNR SLGVQ
Sbjct: 71  GTPSLMPPATVAAILDAAERHWGFAEGIEITLEANPSSVEAARFADLAAAGVNRASLGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++++LRFLGR H   EA+ A+  A+  F R+SFDLIYA P Q +  WE EL RA+ Y 
Sbjct: 131 ALDDEALRFLGRAHGVDEALRALQTAQEQFGRVSFDLIYARPGQPLADWEAELTRAIGYG 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLSLYQLTIE GT F      G L +P  + A DL+  T++IT+A GL AYE SNH+ 
Sbjct: 191 TEHLSLYQLTIEPGTRFATEAAAGRLTIPDGDAAADLFETTRAITAAAGLPAYETSNHAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +GAES HNL YWRYGDY GIGPGAH R       VA +  K PE+W+  V +NGH +  +
Sbjct: 251 IGAESRHNLTYWRYGDYAGIGPGAHGR----REGVATARRKKPENWMAAVDRNGHGIELE 306

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNL-DIECERNLQRQGFIERVQFSRL 376
           E L+   +A E L+MGLRL EG+ ++    LA GR + D      L +QG + R    RL
Sbjct: 307 EALAPVARATEALVMGLRLTEGVDLRYVTALAKGREMVDAAQVERLAQQGLVRR-DGERL 365

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T+ G  +LD+++  + +
Sbjct: 366 IVTEAGALLLDAILREVVL 384


>gi|315504223|ref|YP_004083110.1| oxygen-independent coproporphyrinogen iii oxidase [Micromonospora
           sp. L5]
 gi|315410842|gb|ADU08959.1| oxygen-independent coproporphyrinogen III oxidase [Micromonospora
           sp. L5]
          Length = 414

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 129/399 (32%), Positives = 199/399 (49%), Gaps = 23/399 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
                  G+   GVYVH PFC  +C YCDFN++      G   +E +  S L E+    +
Sbjct: 26  ATARRAVGARGFGVYVHVPFCASRCGYCDFNTYTASELGGGASRETYADSVLAELALAAR 85

Query: 65  LTG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           + G   P  + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   +
Sbjct: 86  VLGDSPPPRVDTVFVGGGTPTLLPADDLARILDGIDRVWGLAADAEVTTEANPESVSPES 145

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALP 180
            +  R AG  RISLG+QS     L  L R H+A  A  AA+      F  ++ DLIY  P
Sbjct: 146 LKTLRAAGYTRISLGMQSAAPGVLAVLDRRHSAGRATAAALEARDAGFEHVNLDLIYGTP 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T   +   L + +   VDH+S Y L +E GT      + G+L  PS++VA D Y   +
Sbjct: 206 GETADDFAASLAQVVDAGVDHVSAYALIVEDGTRLAGRMRRGELPYPSDDVAADRYLAAE 265

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +     G   YE+SN +    A   HNL YW   D+ G+GPGAHS V      V     K
Sbjct: 266 AALGEAGFSWYEVSNWARSAAAACRHNLLYWTGADWWGLGPGAHSHVGG----VRWWNVK 321

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--LAGRNLDIE 357
           HP ++   + +     + +E L+ ++Q  E +M+ +RL  G+ +   +    AG      
Sbjct: 322 HPSAYAARLAEGASPALAREQLTPDEQHMEDVMLRVRLASGLPLDVLDEPGRAG------ 375

Query: 358 CERNLQRQGFIERVQFSR--LRCTQRGMTMLDSVIANLA 394
                +  G ++   ++R  +  T RG  + D+V+ +L 
Sbjct: 376 -AERARDAGLLDAGAYARGLVVLTLRGRLLADAVVRDLL 413


>gi|15892142|ref|NP_359856.1| coproporphyrinogen III oxidase [Rickettsia conorii str. Malish 7]
 gi|15619271|gb|AAL02757.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia conorii str. Malish 7]
          Length = 400

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 157/385 (40%), Positives = 231/385 (60%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFCV KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCVSKCPYCDFNSHVAS-TIDHNQWLKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++  G+NRIS+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISTLAIIDNQTEITLETNPTSFETEKFKAFKAVGINRISI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR ++  S   AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q    I  
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQALDLIRL 377

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 378 DEN--IYLTDKGLMLYSYIVPRLII 400


>gi|237745874|ref|ZP_04576354.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
 gi|229377225|gb|EEO27316.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
          Length = 402

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 130/375 (34%), Positives = 207/375 (55%), Gaps = 9/375 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDF SH +   + +  +++    +++    L   R ISSIF G
Sbjct: 27  PLSLYIHIPWCIRKCPYCDFYSHEKTSVLPENEYLKVLRRDLELSLPLIENRKISSIFIG 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I  +L  + +   V  + EI++EANP + E   FQ YR++G+NR+S+GV
Sbjct: 87  GGTPSLFSAGGIDKLLSFVRELLPVLPDAEISLEANPGTFEAGKFQSYRRSGINRLSIGV 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  ++ L  LGR H+A EA AA+  A + F   + DL+Y LP QT+ Q + ++  ALSY
Sbjct: 147 QSFTQERLHELGRIHDADEARAAVETAGHYFDNFNLDLMYGLPFQTLDQLKDDVSIALSY 206

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLTIE  T ++K       VLP E+   ++    ++ T+A G   YE+S ++
Sbjct: 207 KPAHLSFYQLTIEPNTYYFKHPP----VLPDEDAIDEMQTWIETSTAATGYEHYEVSAYA 262

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G + LHN NYW +GDY+GIG  AHS++ +   R+   +  ++P  +++ +++ G  + 
Sbjct: 263 RSGRQCLHNRNYWLFGDYLGIGAAAHSKITLPDQRIIRQMRLRNPHLYMQGIKQ-GIPLE 321

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
           E+  +       EF++  LRL +G S   +    G  L +  E        G +      
Sbjct: 322 EQFEVPVSDLGFEFMLNALRLTDGFSPALFRERTGLPLSVIDEGLARAAHLGLLHISPL- 380

Query: 375 RLRCTQRGMTMLDSV 389
            +R T+ G   L+ +
Sbjct: 381 HIRPTELGKRFLNDL 395


>gi|294341382|emb|CAZ89799.1| putative Coproporphyrinogen III oxidase [Thiomonas sp. 3As]
          Length = 400

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 136/382 (35%), Positives = 214/382 (56%), Gaps = 11/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+C+K+CPYCDFNSH  R    + ++ ++ +   ++     L   R + S+F
Sbjct: 17  PLSLYVHLPWCLKQCPYCDFNSHEWRAGGSIPEQAYLAALRADLDAALPLVWGRRVISVF 76

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P+ I  ++  +     + ++ EIT+EANP + E + F  + +AGVNR+S+
Sbjct: 77  IGGGTPSLFSPEAIDQLITDVRARLPLVADAEITLEANPGTFERDRFAAFAQAGVNRLSI 136

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS ++  LR LGR H+A +A  A+  A   F   + DL++ALP+Q M   + ++  AL
Sbjct: 137 GVQSFDDDRLRALGRVHDARQAHDAVAEAARHFASFNLDLMFALPQQDMAGCKADVHEAL 196

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++   HLSLYQLT+E  TLF +        LP +++A D+ +    +  A GL  YE+S 
Sbjct: 197 AHQPPHLSLYQLTLEPNTLFARQPP----KLPDDDLAADMQHAVADLAEAAGLQRYEVSA 252

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G    HNLNYW++GDYIGIG GAHS++      V  +  +HP+ +++   + G AV
Sbjct: 253 YAAPGHRCRHNLNYWQFGDYIGIGAGAHSKLTFAHRVVRQTRWRHPQRYMEQAAQ-GLAV 311

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ--RQGFIERVQF 373
             +  +S      EF++  LRLREG+ V+ +    G       E+ LQ  +   +     
Sbjct: 312 ETEVEVSRSDLPFEFMLNALRLREGVRVELFAQRTGLPPS-AIEKPLQTAQSKALLVDDA 370

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             LR T  G  ML++ +  L +
Sbjct: 371 DVLRTTPLGFDMLNNAL-ELFL 391


>gi|221633414|ref|YP_002522639.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermomicrobium roseum DSM 5159]
 gi|221156673|gb|ACM05800.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermomicrobium roseum DSM 5159]
          Length = 404

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 137/383 (35%), Positives = 197/383 (51%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             G+YVH PFC + CPYCDFN + R+  +    ++ +   E+  +    G   + +I+ G
Sbjct: 21  PWGLYVHIPFCRRVCPYCDFNVYARQEPL-IPRYLAAVRRELALLADRWGRGPVRTIYLG 79

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P  +A +LD IA  + +    E+T+EANP +V+     GYR AGVNR+SLGV
Sbjct: 80  GGTPSLLTPHQVAELLDAIAAIFVLVDQPEVTLEANPETVDTEKLAGYRAAGVNRLSLGV 139

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+L  Q L+ LGR H     +AA   AR   F  ++ DLIY  P QT  QWE +L   LS
Sbjct: 140 QTLVPQGLKVLGRAHRPETPVAAYRAARATGFRNVNLDLIYGWPGQTRDQWEQDLATVLS 199

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +HLSLY LTIE GT + +  + G L    ++V  +L  L       HG   YE+SN 
Sbjct: 200 WQPEHLSLYALTIEPGTPYERAVRRGILRPLDDDVVAELAELAMEQLEKHGYLHYELSNW 259

Query: 257 SFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +  G   S+HN  YWR G Y+G+G GAH  +      +    E+ P  ++  V      +
Sbjct: 260 ARAGCSRSIHNTIYWRNGFYLGVGAGAHGYLGG----IRTVNERLPARYIARVEAGDLPI 315

Query: 316 VEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERV 371
            + E +    +  E +M+GLRL  +GIS        G  L          L + G IE  
Sbjct: 316 ADMESIDPRTELVETMMLGLRLVADGISAAAVRARHGVELSEAYGPELDELVQYGLIE-W 374

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              RLR ++RG+ + + V     
Sbjct: 375 DGERLRLSRRGILLANEVAVRFL 397


>gi|15901263|ref|NP_345867.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae TIGR4]
 gi|15903309|ref|NP_358859.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae R6]
 gi|111658602|ref|ZP_01409259.1| hypothetical protein SpneT_02000277 [Streptococcus pneumoniae
           TIGR4]
 gi|116517056|ref|YP_816707.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae D39]
 gi|148985636|ref|ZP_01818790.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|148993031|ref|ZP_01822625.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|148997537|ref|ZP_01825142.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|149002799|ref|ZP_01827725.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|149007321|ref|ZP_01830979.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|149011651|ref|ZP_01832847.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|168489574|ref|ZP_02713773.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae SP195]
 gi|168491313|ref|ZP_02715456.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC0288-04]
 gi|168493313|ref|ZP_02717456.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC3059-06]
 gi|168575868|ref|ZP_02721783.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae MLV-016]
 gi|169832786|ref|YP_001694844.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182684367|ref|YP_001836114.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CGSP14]
 gi|221232149|ref|YP_002511302.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854856|ref|YP_002736368.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae JJA]
 gi|225859174|ref|YP_002740684.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae 70585]
 gi|225860811|ref|YP_002742320.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|237650006|ref|ZP_04524258.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CCRI 1974]
 gi|237822444|ref|ZP_04598289.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|298229578|ref|ZP_06963259.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255450|ref|ZP_06979036.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502640|ref|YP_003724580.1| coproporphyrinogen dehydrogenase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|303254564|ref|ZP_07340668.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS455]
 gi|303259005|ref|ZP_07344984.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae SP-BS293]
 gi|303261689|ref|ZP_07347636.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264358|ref|ZP_07350278.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS397]
 gi|303265843|ref|ZP_07351740.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS457]
 gi|303268176|ref|ZP_07353975.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS458]
 gi|307068062|ref|YP_003877028.1| coproporphyrinogen III oxidase-like Fe-S oxidoreductases
           [Streptococcus pneumoniae AP200]
 gi|307127022|ref|YP_003879053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae 670-6B]
 gi|14972898|gb|AAK75507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae TIGR4]
 gi|15458906|gb|AAL00070.1| Coproporphyrinogen III oxidase [Streptococcus pneumoniae R6]
 gi|116077632|gb|ABJ55352.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae D39]
 gi|147756592|gb|EDK63633.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP11-BS70]
 gi|147759093|gb|EDK66087.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP14-BS69]
 gi|147761125|gb|EDK68093.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP18-BS74]
 gi|147764082|gb|EDK71014.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP19-BS75]
 gi|147922117|gb|EDK73239.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP3-BS71]
 gi|147928232|gb|EDK79249.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP9-BS68]
 gi|168995288|gb|ACA35900.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae Hungary19A-6]
 gi|182629701|gb|ACB90649.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae CGSP14]
 gi|183571920|gb|EDT92448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae SP195]
 gi|183574460|gb|EDT94988.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC0288-04]
 gi|183576670|gb|EDT97198.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC3059-06]
 gi|183578187|gb|EDT98715.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae MLV-016]
 gi|220674610|emb|CAR69173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae ATCC 700669]
 gi|225720284|gb|ACO16138.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae 70585]
 gi|225722950|gb|ACO18803.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae JJA]
 gi|225727090|gb|ACO22941.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238235|gb|ADI69366.1| coproporphyrinogen dehydrogenase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301794449|emb|CBW36883.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae INV104]
 gi|301800274|emb|CBW32894.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae OXC141]
 gi|301802150|emb|CBW34887.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae INV200]
 gi|302598532|gb|EFL65574.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS455]
 gi|302637269|gb|EFL67757.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639948|gb|EFL70404.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae SP-BS293]
 gi|302642255|gb|EFL72603.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS458]
 gi|302644578|gb|EFL74828.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS457]
 gi|302646170|gb|EFL76397.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae BS397]
 gi|306409599|gb|ADM85026.1| Coproporphyrinogen III oxidase-like Fe-S oxidoreductases
           [Streptococcus pneumoniae AP200]
 gi|306484084|gb|ADM90953.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae 670-6B]
 gi|327389595|gb|EGE87940.1| radical SAM superfamily protein [Streptococcus pneumoniae GA04375]
 gi|332073716|gb|EGI84195.1| radical SAM superfamily protein [Streptococcus pneumoniae GA17570]
 gi|332074732|gb|EGI85206.1| radical SAM superfamily protein [Streptococcus pneumoniae GA17545]
 gi|332074990|gb|EGI85462.1| radical SAM superfamily protein [Streptococcus pneumoniae GA41301]
 gi|332200851|gb|EGJ14923.1| radical SAM superfamily protein [Streptococcus pneumoniae GA41317]
 gi|332203239|gb|EGJ17307.1| radical SAM superfamily protein [Streptococcus pneumoniae GA47901]
          Length = 376

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + ++ LS ++Q +E + +GLR + G+S+  +E   G++      E  R+L +QG + ++
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T+RG+ + D+V     +
Sbjct: 352 EGDHVRMTKRGLFLGDTVAERFIL 375


>gi|300113391|ref|YP_003759966.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           watsonii C-113]
 gi|299539328|gb|ADJ27645.1| oxygen-independent coproporphyrinogen III oxidase [Nitrosococcus
           watsonii C-113]
          Length = 385

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 127/370 (34%), Positives = 199/370 (53%), Gaps = 9/370 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CV+KCPYCDFNSH    ++ +  +I + + +++        R I SIF G
Sbjct: 9   PLALYIHFPWCVRKCPYCDFNSHALPKELPETAYIDALVRDLEQDLPRVWGRRIHSIFMG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +++  +L  +      S  +EIT+EANP +VE   F  +   G+NR+SLGV
Sbjct: 69  GGTPSLFSAESLDRLLSAVRARLPWSPQIEITLEANPGTVEQGRFTEFHHIGINRLSLGV 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +++L+ LGR H++ E+  A+  A    F  ++ DL++ LP QT TQ   ++  A+S
Sbjct: 129 QSFNDKALKHLGRIHSSQESCQAVAAAHTAGFDNINLDLMFGLPGQTETQALADVAMAVS 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  H+S YQLT+E  T FY+        LP E          Q+  +  G H YE+S  
Sbjct: 189 LAPHHISYYQLTLEPHTYFYRYPP----SLPHEEAINTWQTDCQAHLAQAGYHRYEVSAF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +    +  HNLNYWR+GDY+GIG GAH ++     +    +   KHP S+L         
Sbjct: 245 AKSDQQCQHNLNYWRFGDYLGIGAGAHGKISDAMENRITRLWKIKHPTSYLAK-AGTPEG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF-IERVQF 373
           +  +   S ++ A EF++  LRL+EG   + ++  AG  L +  +   Q +   +    F
Sbjct: 304 IGGETNPSPQEAAFEFMLNALRLKEGFPSRLFQERAGLPLSVVEKTLYQAEALELIEWDF 363

Query: 374 SRLRCTQRGM 383
             +R T++G 
Sbjct: 364 RHIRPTEKGF 373


>gi|225857044|ref|YP_002738555.1| coproporphyrinogen III oxidase [Streptococcus pneumoniae P1031]
 gi|225725889|gb|ACO21741.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae P1031]
          Length = 376

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNYGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + ++ LS ++Q +E + +GLR + G+S+  +E   G++      E  R+L +QG + ++
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T+RG+ + D+V     +
Sbjct: 352 EGDHVRMTKRGLFLGDTVAERFIL 375


>gi|322387515|ref|ZP_08061124.1| coproporphyrinogen dehydrogenase [Streptococcus infantis ATCC
           700779]
 gi|321141382|gb|EFX36878.1| coproporphyrinogen dehydrogenase [Streptococcus infantis ATCC
           700779]
          Length = 376

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E          + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLQEFHSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLDGLTKNLDLSVLEELTIEANPGDLDEDKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKDNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E V  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEEVEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   +    ++    I      +LK V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYINGVRYKNHGPI----RHYLKAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +Q +E + +GLR + G+S   +E   G + +    +  R+L  QG + ++
Sbjct: 293 RIHEEHLSLREQMEEEMFLGLRKKTGVSKARFEEKFGTSFENIYGQVVRDLCHQGLL-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +  ++R T++G+ + D+V     +
Sbjct: 352 EDQQIRMTKKGLFLGDTVAERFIL 375


>gi|290960531|ref|YP_003491713.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           scabiei 87.22]
 gi|260650057|emb|CBG73173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces scabiei 87.22]
          Length = 410

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G     LG Y+H P+C  +C YCDFN++      G       ++N+  + + E++  
Sbjct: 21  ALAGAAGRPLGFYLHVPYCATRCGYCDFNTYTATELRGTGGVLASRDNYADTVVDEIRLA 80

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PRS+ ++F GGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+  
Sbjct: 81  RKVLGDDPRSVRTVFVGGGTPTLLAADDLVRMLGAVRDEFGLADDAEVTTEANPESVDPA 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R  G NR+S G+QS  +  L+ L R H        +  AR   F  ++ DLIY  
Sbjct: 141 YLETLRAGGFNRVSFGMQSARQHVLKILDRTHTPGRPERCVAEARAAGFDHVNLDLIYGT 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L  AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 201 PGESDDDWRASLDAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 260

Query: 240 QSITSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           + + SA G   YE+SN +   A   LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 261 EEMLSAAGFDWYEVSNWATSAAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 316

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   +         +E LS E +  E +++ LRLREG  +   +           
Sbjct: 317 KHPGAYAGALAAGRSPGAGRELLSDEDRRVERILLELRLREGCPLSLLKEDGRAAAGRAL 376

Query: 359 ERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
                  G +E    +  R   T RG  + D+V+ +L 
Sbjct: 377 A-----DGLLETGPYEEGRAVLTLRGRLLADAVVRDLV 409


>gi|168483965|ref|ZP_02708917.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1873-00]
 gi|172042779|gb|EDT50825.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1873-00]
 gi|332201860|gb|EGJ15930.1| radical SAM superfamily protein [Streptococcus pneumoniae GA47368]
          Length = 376

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + ++ LS ++Q +E + +GLR + G+S+  +E   G++      E  R+L +QG + ++
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGVSMARFEKKFGQSFAGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T+RG+ + D+V     +
Sbjct: 352 EGDHVRMTKRGLFLGDTVAERFIL 375


>gi|312793767|ref|YP_004026690.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180907|gb|ADQ41077.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 375

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 205/381 (53%), Gaps = 10/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC KKC YCDF S+          +  +   E+ + ++      I +I+ 
Sbjct: 2   RNIGLYIHVPFCKKKCYYCDFVSYENVDDDMVFAYFSALENELIFYKE-NYEIEIDTIYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + I  +L+ I  N+ V S  EI+IEANP S+     + YR+AG+NR+S+G
Sbjct: 61  GGGTPSFVPAKYILKLLEFIYSNFKVKSTCEISIEANPESITKEKLKCYREAGINRLSVG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  LR +GR H++  A+  +      F   S D+I  LP QT   +   L   L 
Sbjct: 121 IQSLNDAELRAIGRIHDSEVALKILSRVPLYFENFSVDVIIGLPYQTFESFSQTLNTLLK 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  HLS+Y L IE+GT  ++ +++   +LPSE+    ++   +   S  GL+ YEISN 
Sbjct: 181 FSPPHLSIYSLKIEEGTPLFERYEEYKSLLPSEDEERRMFWWARDRLSEVGLYHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW   +YIG+G  AHS  +   +    +I    + +   +++NG AV 
Sbjct: 241 AKKGFECKHNLKYWNCDEYIGVGCAAHSFFEDCRYYNTSNI----KEYTNKIKENGLAVE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
            KE +SSE+   EF+++GLR  EG S+ ++    G   + +       L++ G I+    
Sbjct: 297 GKELISSEESEKEFIILGLRKIEGFSLDEFRERFGIEFERKYKSQIEKLKKYGLIDI--N 354

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            R++ T+RG+ + + V     
Sbjct: 355 GRIKLTERGIDLANLVWQEFV 375


>gi|111221442|ref|YP_712236.1| coproporphyrinogen III oxidase [Frankia alni ACN14a]
 gi|111148974|emb|CAJ60654.1| putative oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Frankia alni
           ACN14a]
          Length = 411

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 128/398 (32%), Positives = 197/398 (49%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-------KVGQENFIQSFLTEMQWM 62
            +      +LG YVH P+C  +C YCDFN++            VG   F+     E++  
Sbjct: 21  ALAELTERALGAYVHVPYCAARCGYCDFNTYTAADLGGALVSSVGLTTFVDIATKEIRLA 80

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R + G     IS++F GGGTP+L+   ++A +L  +   + ++++ E+T EANP SV+  
Sbjct: 81  RAVLGDADLPISTVFIGGGTPTLLSAGDLARLLHALDAEFGLAADAEVTTEANPESVDPA 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R AG  R+S G+QS     L  L R H        +  AR   F ++S DLIY  
Sbjct: 141 QLEQLRAAGYTRVSFGMQSDRPHVLAALDRRHTPGRVSEVMRWARKAGFEQVSLDLIYGA 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L+ A+    DH+S Y LT+E+GT   +  + G+L+ P +++  D Y L 
Sbjct: 201 PGESEADWAASLRAAVQLGPDHVSAYALTVEEGTKLSRRVRRGELLEPDDDLLADRYLLA 260

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             I +A GL  YE+SN S    A   HNL YWR   + G GPGAHS V      V     
Sbjct: 261 DEILTAAGLTNYEVSNWSRGPAARCRHNLGYWRGDHWWGFGPGAHSHVGG----VRWWNV 316

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +HP  +   +         +E L +  +  E +M+G+RL EG+ V + +  AG       
Sbjct: 317 RHPAEYAARLGAQRSPASAREELDASTRRVERVMLGVRLAEGLGVAELDE-AGL----AA 371

Query: 359 ERNLQRQGFIER--VQFSRLRCTQRGMTMLDSVIANLA 394
             +L R G +E   ++  R+R T+RG  + D+V+  L 
Sbjct: 372 CADLARSGLVEPGALESGRVRLTRRGRLLTDTVVRALL 409


>gi|67459492|ref|YP_247116.1| coproporphyrinogen III oxidase [Rickettsia felis URRWXCal2]
 gi|67005025|gb|AAY61951.1| Probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia felis URRWXCal2]
          Length = 386

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 159/385 (41%), Positives = 240/385 (62%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +++L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 5   ADNLSIYIHWPFCLSKCPYCDFNSHVVS-TIDHHQWLKSYETEIEYFKDIIQNKYIKSIF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 64  FGGGTPSLMNPVVVAGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKSAGINRVSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  I  A +IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 124 GVQSLKEDDLKKLGRTHDALQAIKTIEAANSIFPRVSFDLIYARSGQKLKDWQEELKQAM 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 184 RLANGHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESQKYLRYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++    E LHNL YW Y +Y+GIGPGAHSR+   +  V AI +   PE WL  V+     
Sbjct: 244 YALANQECLHNLTYWNYNNYLGIGPGAHSRIIEPASSVSAIMMWHKPEKWLDSVKTKNVG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L++++  +E LMMGLRL+ GI++ + E          LD+   +N Q Q  I+ 
Sbjct: 304 IQTNAKLTNQEIIEEILMMGLRLKSGINIAELEQKINTKLVDILDMNNLQNYQNQDLIKL 363

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 364 DKN--ISLTDKGLMLHSYIVPRLII 386


>gi|322391745|ref|ZP_08065210.1| coproporphyrinogen dehydrogenase [Streptococcus peroris ATCC
           700780]
 gi|321145225|gb|EFX40621.1| coproporphyrinogen dehydrogenase [Streptococcus peroris ATCC
           700780]
          Length = 376

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 202/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E          + + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLQEFHSY----DIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  +LDG+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLETLLDGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  +++A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMDQVKDNVEKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E +  +++          G   YEIS
Sbjct: 178 ITLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIEELERSGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            V +E LS  +Q +E + +GLR + G+S+  +E   G + +    +  RNL  QG + +V
Sbjct: 293 RVTEEHLSQREQMEEEMFLGLRKKSGVSITRFEEKFGTSFEDLYGQVVRNLCHQGLL-QV 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +  ++R T++G+ + D+V     +
Sbjct: 352 EGQQIRMTKKGLFLGDTVAEQFIL 375


>gi|259909618|ref|YP_002649974.1| coproporphyrinogen III oxidase [Erwinia pyrifoliae Ep1/96]
 gi|224965240|emb|CAX56772.1| coproporphyrinogen III oxidase [Erwinia pyrifoliae Ep1/96]
 gi|283479696|emb|CAY75612.1| putative oxidase [Erwinia pyrifoliae DSM 12163]
          Length = 378

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 213/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  E ++Q  L ++     LT  R +S++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHEEYVQHLLNDLDIDLPLTSGRDVSTVFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+    T++ N EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLTLAHNAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFNPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLAEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPP----RLPDEDDLWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++       +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGTIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  ++  ++  EF M   RL E     ++    G     +  + +  L + G++    
Sbjct: 297 DKRVEVADAEKPFEFFMNRFRLLEAAPRAEFTRYTGLPEHSIRAQIDTALVK-GYLTETA 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 356 -EHWQVTEKGKLFLNSLL-ELFL 376


>gi|149019365|ref|ZP_01834727.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP23-BS72]
 gi|147931235|gb|EDK82214.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP23-BS72]
          Length = 376

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + ++ LS ++Q +E + +GLR + GIS+  +E   G++      E  R+L +QG + ++
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGISMARFEEKFGQSFAGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T+RG+ + D+V     +
Sbjct: 352 EGDHVRMTKRGLFLGDTVAERFIL 375


>gi|221323998|ref|ZP_03605292.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. SMY]
          Length = 366

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 11/368 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRG 382
            +  T +G
Sbjct: 357 AVYLTHQG 364


>gi|304403919|ref|ZP_07385581.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           curdlanolyticus YK9]
 gi|304346897|gb|EFM12729.1| oxygen-independent coproporphyrinogen III oxidase [Paenibacillus
           curdlanolyticus YK9]
          Length = 389

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 117/382 (30%), Positives = 193/382 (50%), Gaps = 11/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
              +Y+H PFC  KC YCDFNS V + +   + ++ +   EM+   +   P  I ++F G
Sbjct: 6   PRALYIHIPFCTNKCHYCDFNSFVLKGQ-PVDAYLDALEHEMRLTVEAMPPVVIDTVFVG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++ P  +   L  + +++ ++++VE T+EANP + + +        GVNRIS GV
Sbjct: 65  GGTPTVLTPPQMERFLASVRRHFPLAADVEFTMEANPGTTDSDKLAAMYAGGVNRISFGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  +GR HN  +   +I  A+   F  +S DL++ LPKQT+      + +AL 
Sbjct: 125 QSFNNDLLAGIGRIHNIDDVYRSIDNAKKAGFTNLSIDLMFGLPKQTVELLTDSVDKALQ 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H SLY L +E+ TLF+K+++  +L LP+E   + ++ +  +     G   YEISN 
Sbjct: 185 LGLTHYSLYSLKVEENTLFHKLYERNELPLPTEEEELAMFMVVMNKLKEAGYRHYEISNF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YWR   Y G+G GAH   +   H     ++   ++ L  +       +
Sbjct: 245 AIPGLESRHNSTYWRNEPYYGLGAGAHGYARGERHLNIKGVQPFIDAALARL-----PRL 299

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERVQ 372
           E   +S  +  ++F+M+GLRL EG+    +E          +       L R+G +E   
Sbjct: 300 ETTPISEAEAMEDFMMVGLRLLEGVRGAAFEAQFPSHTMEGVFGGILERLVREGLLETTP 359

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               R T+RG+ + + V     
Sbjct: 360 ERGYRLTERGIPLGNEVFGAFV 381


>gi|304309823|ref|YP_003809421.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
 gi|301795556|emb|CBL43754.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
          Length = 396

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 139/383 (36%), Positives = 204/383 (53%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH +   V + ++I   L ++         R + SIF G
Sbjct: 13  PLSLYVHIPWCVRKCPYCDFNSH-QAIDVNEPHYIDCLLDDLDRDLHWVQERPLHSIFIG 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   ++I  ++ GI +   +  ++EIT+EANP + E   F GYR+ GVNR+S+GV
Sbjct: 72  GGTPSLFSAESITRLIKGIQQRIALEPSIEITLEANPGTAEQARFYGYREGGVNRLSIGV 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR HN   A AAI LAR+  F   + DL++ LP Q++     +LQ AL 
Sbjct: 132 QSFNTDHLQRLGRIHNGDNAKAAIQLARDAGFENFNIDLMHGLPGQSLNHALDDLQTALQ 191

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   HLS YQLTIE  T+FY         LP ++   D+     ++   +G++ YE+S +
Sbjct: 192 FQPPHLSWYQLTIEPNTVFYNAPP----KLPEDDTLWDIQQAGIALLEQYGMNHYEVSAY 247

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVR-KNGH 313
           +  G  S HNLNYW++GDY+GIG GAH ++ V      +   K   P  ++  +      
Sbjct: 248 AKAGRRSRHNLNYWQFGDYLGIGAGAHGKITVRDRGEILRYRKTRLPRDYMAGIDPAKAS 307

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERV 371
            +   E + + +   EF M  LRLREG+  K +E   G +L             G +E  
Sbjct: 308 YLAATEAVPAPELPFEFFMNALRLREGVPTKLFEQRTGLDLREIAPTLEKALALGLLE-S 366

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             S+L  T +G   L+ + A   
Sbjct: 367 SPSQLAPTPQGWLFLNDLTALFL 389


>gi|125973840|ref|YP_001037750.1| coproporphyrinogen III oxidase, anaerobic [Clostridium thermocellum
           ATCC 27405]
 gi|256004292|ref|ZP_05429274.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum DSM 2360]
 gi|281418000|ref|ZP_06249020.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum JW20]
 gi|125714065|gb|ABN52557.1| coproporphyrinogen III oxidase, anaerobic [Clostridium thermocellum
           ATCC 27405]
 gi|255991726|gb|EEU01826.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum DSM 2360]
 gi|281409402|gb|EFB39660.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum JW20]
 gi|316939964|gb|ADU73998.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           thermocellum DSM 1313]
          Length = 380

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 119/382 (31%), Positives = 186/382 (48%), Gaps = 10/382 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             LG+Y+H PFC  KC YCDFNS   R       +  +   E+     +     I ++FF
Sbjct: 5   KELGLYIHVPFCKAKCFYCDFNSFACRDD-FVPAYFNALKKEISAYSDIIKGYRIKTVFF 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +   NI  I+  + + + +    E+TIEANP +++      YR AG+NR+S+G
Sbjct: 64  GGGTPSYVGAHNIYEIVSLLKQKFDMDGCFELTIEANPGTLDEEKLLVYRDAGINRLSIG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ +   L  LGR H   E     HLA    F  ++ DLI+A+P Q+   W   + +  
Sbjct: 124 LQAWQNHLLESLGRIHTVEEFEENYHLAVKTGFDNINVDLIFAIPGQSFEDWAETINKVA 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                H+S Y L IE+ T+F      G+L    + +   +Y          G   YEISN
Sbjct: 184 ELNPRHISCYSLIIEEDTVFGAKFSKGELSSVEDELDRKMYWYAVEKLRTVGYKHYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S  G E  HNL YW+  +YIG G GAHS           +I    E ++K++      V
Sbjct: 244 FSKEGFECAHNLIYWKEQEYIGFGAGAHSYFNGQRFNNTYNI----EEYVKIINSGRLPV 299

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
             K  +  + +  EF+M+GLRL EG+S++++    G N+     E  +NL ++G +  V+
Sbjct: 300 ENKIAIGRKDEISEFMMLGLRLVEGVSIREFYERFGENVLEVFKEQIKNLSKRGLVA-VE 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              ++ T+ G+ + +       
Sbjct: 359 NGFIKLTRLGLDLANQAFMEFV 380


>gi|85060010|ref|YP_455712.1| coproporphyrinogen III oxidase [Sodalis glossinidius str.
           'morsitans']
 gi|84780530|dbj|BAE75307.1| putative coproporphyrinogen III oxidase [Sodalis glossinidius str.
           'morsitans']
          Length = 376

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 133/379 (35%), Positives = 210/379 (55%), Gaps = 16/379 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++   L ++     LT  R+++++F G
Sbjct: 6   PLSLYLHIPWCVQKCPYCDFNSHALKGEVPHQEYVDHLLADLDHDLPLTSGRTVNTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+ +   ++S+ EIT+EANP +VE + F GY+ AG+NRIS+GV
Sbjct: 66  GGTPSLLSARAMQSLLDGVRQRLPLASDAEITMEANPGTVEADRFAGYQLAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L  LGR H A EA  A  LA +   R  + DL++ LP Q++     +L  A++
Sbjct: 126 QSFAAEKLALLGRIHGAEEARRAARLAASPGLRSFNLDLMHGLPDQSLAGALDDLTEAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  TLF          LP ++   D+Y    ++  A G   YE S +
Sbjct: 186 LAPPHLSWYQLTIEPNTLFGSRPP----ALPDDDALWDIYQRGDTLLKAAGYRQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +  G +  HNLNYWR+GDY+GIG GAH ++      V  +++ +HP  +++     G+ +
Sbjct: 242 ARPGFQCRHNLNYWRFGDYLGIGCGAHGKLTQPDGTVLRTVKTRHPRGYMQ-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQ 372
            ++  ++  +   E+ M   RL E     ++    G   D      ER L    +I    
Sbjct: 297 AKRYPVAPAELPFEYFMNRFRLLEAAPRAEFTAFTGLTEDAGRPALERALAGD-YITE-S 354

Query: 373 FSRLRCTQRGMTMLDSVIA 391
            S  + T++G   L+S++ 
Sbjct: 355 ASHWQVTEKGKLFLNSLLE 373


>gi|229586416|ref|YP_002844917.1| coproporphyrinogen III oxidase [Rickettsia africae ESF-5]
 gi|228021466|gb|ACP53174.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia africae ESF-5]
          Length = 400

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 157/385 (40%), Positives = 232/385 (60%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHNQWLKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NRIS+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRISI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR ++  S   AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q    I  
Sbjct: 318 IQTNTNLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQALDLIRL 377

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 378 DEN--IYLTDKGLMLYSYIVPRLII 400


>gi|144897366|emb|CAM74230.1| oxygen-independent coproporphyrinogen III oxidase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 385

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 177/388 (45%), Positives = 245/388 (63%), Gaps = 10/388 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    S   GVYVHWPFC+ KCPYCDFNSH     + Q+ + ++ L E++          
Sbjct: 2   LPVTPSPGFGVYVHWPFCLSKCPYCDFNSHAA-DTIDQDRWRRALLAELEHFAARKPEAE 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIFFGGGTPSL++P  IA ++D I + W     +EIT+EANPS+VE   F+ +R AG+
Sbjct: 61  VTSIFFGGGTPSLMDPATIAALIDRIHQLWPCDPLIEITLEANPSTVEAQRFRDFRAAGI 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L +  L FLGR H+A+EA+AA+ +A   F R SFDLIYA P QTM  W+ E
Sbjct: 121 NRLSLGVQALNDADLHFLGRRHDAAEALAALDVAAATFERFSFDLIYARPGQTMAAWQTE 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +AL+    HLS YQLTIE+GT FY +H  G+  LP E++A DL+ LT+S+ +  GL A
Sbjct: 181 LTQALALTGGHLSAYQLTIEEGTAFYPIHARGEFQLPDEDLAADLFALTRSMAAEAGLPA 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISNH+  G ES HNL YWR GDY+GIGPGAH R+       A    + P+ WL+ V  
Sbjct: 241 YEISNHARPGQESRHNLTYWRGGDYVGIGPGAHGRLN----HRATRQHRAPDVWLRRVEA 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQG 366
           +GHA   +E L +  +A+E +MMGLRL EGI    +    G +L    D++   +L++ G
Sbjct: 297 HGHACQGEEALDARTRAEELVMMGLRLNEGIHADHFRDQCGLDLWQVIDVQAHAHLEQDG 356

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            + R     +  T+ G+ +L+S+   L 
Sbjct: 357 LLRRTAHG-IAATEAGLLVLNSLTGALL 383


>gi|325262639|ref|ZP_08129376.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. D5]
 gi|324032471|gb|EGB93749.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. D5]
          Length = 395

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 129/398 (32%), Positives = 208/398 (52%), Gaps = 24/398 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
              L +Y+H PFCV+KC YCDF S     +  ++ ++ + L E+Q  ++    P  ++++
Sbjct: 2   EKELELYLHIPFCVRKCAYCDFLS-APADEAARQEYVDALLMEIQGYKETYYVPYRVTTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+  + I  I   + +++ ++   EITIE NP ++     + ++ AG+NR+S
Sbjct: 61  FIGGGTPSLLTAKQITEIFAALHQSFRLADTAEITIEVNPGTITEEKLRSWKAAGINRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS + + L+ LGR H   E +    LAR   F  ++ DLI A+P QT   WE  L R
Sbjct: 121 IGLQSADNEELKMLGRIHTWEEFMETYTLAREKGFENINIDLISAIPGQTEASWENTLTR 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGD---------------LVLPSENVAVDLYNL 238
           A     +H+S Y L +E+GT FY+ + + D                 LP E+    +Y +
Sbjct: 181 AARLDPEHISAYSLIVEEGTPFYERYGEPDGQRAVDVIDTENPELPSLPDEDTERAIYEM 240

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           T  I   +G H YEISN++  G E  HNL YW   +Y+GIG GA S VK   +       
Sbjct: 241 TAGILLHYGYHRYEISNYAKKGYECRHNLGYWERKEYLGIGLGASSFVKGSRYHNT---- 296

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +   S+LK V+       + E LS+  + +EF+ +GLR  +GIS+  +E L  +++    
Sbjct: 297 EDISSYLKKVQGREEIKEDVEQLSTADEIEEFMFLGLRETKGISISRFEQLYKQSIFDVY 356

Query: 359 ERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              L++  +G +  V    +R T RG+ + + V     
Sbjct: 357 GTELEKLTEGELLTVDGDHIRLTGRGIDVSNLVFIEFM 394


>gi|317128297|ref|YP_004094579.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473245|gb|ADU29848.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           cellulosilyticus DSM 2522]
          Length = 380

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 200/380 (52%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VYVH PFC + C YCDFN    + +   + ++     E++   ++    +ISSI+ GGG
Sbjct: 5   AVYVHVPFCEQICHYCDFNKFFLKNQ-PVDEYLSLCDQEIKNTVKVHPNHAISSIYVGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    ++ +L  I +N+    NVE T+E NP SV+    +  R+ GVNR+S+G Q+
Sbjct: 64  TPTSLTTLQLSKLLSSIKENFYTDRNVEWTVEVNPGSVDQEKLEMMREYGVNRLSIGAQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L+ +GR+H   +    I LAR   F  +S D+++ LPKQT  Q+E  L       
Sbjct: 124 FHEDLLKKIGRDHQREDVFHTIELARKVGFHNLSIDIMFGLPKQTEEQFEETLNILTRLP 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E+ T+FY++   G L LP E++   +Y L +     +  + YEISN + 
Sbjct: 184 IEHISAYSLKVEERTVFYQLWNKGKLSLPGEDIEAKMYELLREKMKNNNFNQYEISNFAK 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW+   Y GIG GAHS V          + K    +++ V++ G    E+
Sbjct: 244 NGYESSHNLTYWKNEPYFGIGAGAHSYVAQVRRINHGPLPK----YMEAVKETGFPYREE 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
             +S ++Q +E + MGLR   G+  +D++     N++       ++L  +G I +     
Sbjct: 300 HPVSRKEQMEEEMFMGLRKLAGVRHQDFQEKYHLNIEQAFPGVIQDLIDRGLI-QDNGVV 358

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           ++ T+ G+ + + V     +
Sbjct: 359 IKLTESGLLLGNEVFERFLL 378


>gi|119470551|ref|ZP_01613254.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonadales bacterium TW-7]
 gi|119446252|gb|EAW27529.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonadales bacterium TW-7]
          Length = 369

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 127/377 (33%), Positives = 194/377 (51%), Gaps = 14/377 (3%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           H P+CV+KCPYCDFNSH ++  + +  ++Q  + +++    L   R I SIF GGGTPSL
Sbjct: 2   HVPWCVQKCPYCDFNSHGQKGDIPEAEYVQHLIDDLKADLHLVQGRKIHSIFIGGGTPSL 61

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +       +L  +     ++ N EIT+EANP +VE   F+ Y KAG+NRIS+G+QSL+  
Sbjct: 62  LTGDAYTRLLSEVDSLIGLTDNCEITLEANPGTVETGRFKEYVKAGINRISIGIQSLQSD 121

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            L+ LGR H A+EA  A   A+       + DL++ LP QT+     +L++ ++    H+
Sbjct: 122 KLKALGRIHGANEATYAAEQAKEAGLNSFNLDLMHGLPGQTLDDALSDLKQIIALDPPHI 181

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           S YQLTIE  T F          LP +    D+    Q++ +  G   YEIS ++  G +
Sbjct: 182 SWYQLTIEPNTQFASKPP----TLPQDETLWDIQEQGQALLAKAGYIQYEISGYAKPGYQ 237

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHAVVEKEF 320
             HNLNYWR+GDY+GIG GAH +V      +    E  KHP  ++ MV+     + +   
Sbjct: 238 CQHNLNYWRFGDYLGIGCGAHGKVTNAKTGIITRTEKVKHPRGYMDMVK---PYLYKSWH 294

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRC 378
           +  +  A EF M   RL E   ++D+  L  + L             G +        + 
Sbjct: 295 VEQDDLAFEFFMNRFRLVEPCPIEDYSALTNQPLQSQQAALNKAINTGLLIEKD-GHWQV 353

Query: 379 TQRGMTMLDSVIANLAV 395
           + +G   L+ ++  L V
Sbjct: 354 SLKGHRFLNDLL-ELFV 369


>gi|257055326|ref|YP_003133158.1| coproporphyrinogen III oxidase, anaerobic [Saccharomonospora
           viridis DSM 43017]
 gi|256585198|gb|ACU96331.1| coproporphyrinogen III oxidase, anaerobic [Saccharomonospora
           viridis DSM 43017]
          Length = 422

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 123/393 (31%), Positives = 185/393 (47%), Gaps = 17/393 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQW-MRQL 65
            ++  G+   GVYVH PFC  +C YCDFN++            ++      E+   +  L
Sbjct: 38  ALSELGTRPFGVYVHVPFCATRCGYCDFNTYTAGELGTAASPASWFDGLRRELDLAVTTL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
             P    ++F GGGTPSL+    +A +LD +   + ++S+VE+T E+NP S     F G 
Sbjct: 98  GDPPPADTVFVGGGTPSLLGADGLARVLDAVRDTFGLASDVEVTTESNPESTSPEFFAGL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTM 184
           R+AG  R+SLG+QS     LR L R H       AA       F  ++ DLIY  P +  
Sbjct: 158 REAGYTRVSLGMQSTAPHVLRVLDRVHTPGRPTQAAAEARAAGFEHVNLDLIYGTPGERT 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                 ++  L   VDH+S Y L +E+GT   +  + G++  P ++V    Y L  S+ +
Sbjct: 218 ADLRASVEAVLEAGVDHVSAYALIVEEGTALARRVRKGEIPAPDDDVLAADYELIDSMLT 277

Query: 245 AHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
             GL  YE+SN +    A   HNL YWR GD+ G GPGAHS V      V     KHP  
Sbjct: 278 DAGLRWYEVSNWAASPDARCRHNLGYWRGGDWWGAGPGAHSHVGG----VRWWNVKHPAR 333

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +  ++      V  +E L+  ++  E +M+ LRL EG+ +   +    R       +   
Sbjct: 334 YAAVLADGKLPVAGQEELTDSERYLERVMLELRLAEGLPLDVLDDDGLRE-----AKRAV 388

Query: 364 RQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
             G ++R          T RG  + D+V+  L 
Sbjct: 389 EDGLLDRDAAARGHAVLTDRGRLLADAVVRRLV 421


>gi|169343519|ref|ZP_02864518.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens C str. JGS1495]
 gi|169298079|gb|EDS80169.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens C str. JGS1495]
          Length = 377

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 207/381 (54%), Gaps = 11/381 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF GG
Sbjct: 4   ISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIISLREKHNNLEINTIFIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G+Q
Sbjct: 63  GTPSVLEADELECLLKEVAKL-NMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMGLQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +S 
Sbjct: 122 AKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINIDLMFGLPNQRLNEWEETLREIISL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN++
Sbjct: 182 EPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISNYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YW   ++IG+G  A S +     +   S+    E ++  + + G AV E
Sbjct: 242 KEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSV----EEYINSINEKGEAVEE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
               S     +EF+ MGLR   GI   +++     N++    E       +G + R +  
Sbjct: 298 IITNSKNDNMEEFMFMGLRKINGIDENEFKKRFSMNINDVYGEILNKYIDEGLLIR-ESG 356

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  +++G+ + + ++A+  +
Sbjct: 357 RIFLSEKGIEISNIIMADFLL 377


>gi|297626073|ref|YP_003687836.1| Coproporphyrinogen oxidase / Oxygen-independent coproporphyrinogen
           III oxidase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921838|emb|CBL56398.1| Coproporphyrinogen oxidase / Oxygen-independent coproporphyrinogen
           III oxidase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 399

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 125/390 (32%), Positives = 199/390 (51%), Gaps = 14/390 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLT 66
             +    +  L VYVH PFC  +C YCDFN++      G   ++++ +   E+    +  
Sbjct: 19  EELRAPTTRPLSVYVHIPFCAVRCGYCDFNTYTPSQLAGMNMDDYLAAVHAEIAAAARAL 78

Query: 67  G-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           G  R++S++FFGGGTP++  P  +  +L  +   + +    E+T EANP +++    +  
Sbjct: 79  GTGRAVSTVFFGGGTPTMATPAQLGEVLADLRDTFGLVPGAEVTTEANPETLDRARLETL 138

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
             +G NR+SLG+QS +EQ L  L R+H    A+     A    FP +S DLIY  P +++
Sbjct: 139 LGSGFNRLSLGMQSADEQVLARLDRHHTPGRALQVARWAHEVGFPDVSLDLIYGTPGESL 198

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L  AL  A +HLS Y L +E+GT   +  + G+L +P E+   D Y L + + S
Sbjct: 199 DSWRATLDAALGVAPEHLSAYSLIVEEGTALARRIRHGELAMPDEDAEADEYLLAERMLS 258

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             GL  YEISN +  G E+ HNL YWR  D+ G GPGAHS V    H V     +HP  +
Sbjct: 259 TAGLANYEISNWALPGHEARHNLAYWRSDDWWGFGPGAHSHV----HGVRWWNVRHPRRY 314

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
             ++ +      + E + +  + +E +++ LR+ +G+ V +   L G          L R
Sbjct: 315 AALLGEGARPREDFEVIDAPTRHEERVLLELRIADGLPVGE---LTGTE-RARLAEPLSR 370

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            G +  V   R+  T +G  + D+V  +L 
Sbjct: 371 -GLVTVV-GDRVHLTLQGRLLADAVTRDLL 398


>gi|297584659|ref|YP_003700439.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           selenitireducens MLS10]
 gi|297143116|gb|ADH99873.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           selenitireducens MLS10]
          Length = 382

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 120/381 (31%), Positives = 196/381 (51%), Gaps = 11/381 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGG 78
            +Y+H PFC + C YCDFN    + +   + +++  +TEM     +      + S++ GG
Sbjct: 4   AIYIHIPFCEQICHYCDFNKFYLKSQ-PVDEYVEDLITEMGIYADEHDEKEPVQSVYIGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +A ++  + + + +S + E T+EANP S + +  +G   AGVNR+S+GVQ
Sbjct: 63  GTPTSMSEKQLAKVIHDVRELFPLSESCEFTVEANPGSCDASMMKGLYNAGVNRLSIGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +E  L  + R+H   +A   + +AR      +S DL++ LP QTM QW+  L+ ALS 
Sbjct: 123 TFDETLLSAINRDHEPGDAQKTVDMAREAGITNLSIDLMFGLPGQTMEQWKQTLKAALSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IE  T+FY+M K   L LP E++  D++    +     G   YEISN +
Sbjct: 183 PITHISAYSLKIEPKTVFYQMQKKRQLRLPDEDLEADMFEELVANAKRTGFQHYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW   +Y G G GAH  +    +     + K    ++K V        E
Sbjct: 243 KPGFESRHNLVYWDNCEYYGFGAGAHGYLNGKRYANHGPLPK----YMKAVSAGERPKRE 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFS 374
           +  +SS+ Q +EF+ MGLR   G+S+ D+E      ++         L+  G I  V+  
Sbjct: 299 EHQVSSDAQKEEFMFMGLRKMAGVSLDDFEARYHTTMEETFPGVLEALKGDGLIT-VKDR 357

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           ++  T  G  + + V     +
Sbjct: 358 QVSLTGDGQLLANHVFEKFLL 378


>gi|310766476|gb|ADP11426.1| coproporphyrinogen III oxidase [Erwinia sp. Ejp617]
          Length = 378

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 211/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  E ++Q  L ++     LT  R + +IF G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHEEYVQHLLNDLNIDLPLTSGREVGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     +S + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLSPDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAALGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPP----RLPDEDDLWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++       +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGTIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  ++  ++  EF M   RL E     ++    G     +  + +  L + G++    
Sbjct: 297 DKRVEVADAEKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSIRAQIDTALAK-GYLTETA 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 356 -EHWQVTEKGKLFLNSLL-ELFL 376


>gi|149184522|ref|ZP_01862840.1| coproporphyrinogen III oxidase [Erythrobacter sp. SD-21]
 gi|148831842|gb|EDL50275.1| coproporphyrinogen III oxidase [Erythrobacter sp. SD-21]
          Length = 384

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 164/379 (43%), Positives = 219/379 (57%), Gaps = 9/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGG 78
            +Y+HWPFC+ KCPYCDFNSHV R +     +  + L +M+           + SIFFGG
Sbjct: 4   SLYIHWPFCLAKCPYCDFNSHV-RERTDMAEWEAALLADMRAEFAATKSEEPLISIFFGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +A +L    + W  S ++EIT+E NPSSVE  NF      G+NR+SLGVQ
Sbjct: 63  GTPSLMPPALVASLLREAERLWGFSPDIEITLEGNPSSVEAANFADLANVGINRVSLGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL    L+FLGR H   EA+ A   A+ +F R+S DLIYA P QT  +W  EL  AL+  
Sbjct: 123 SLRGDVLKFLGRLHGVEEALKATETAQRLFDRVSIDLIYARPDQTEDEWRQELSEALALG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLYQLTIE  T F    + G     +++ A DL+ LT+ +T+A G+ AYEISNH+ 
Sbjct: 183 TSHLSLYQLTIEPSTRFATDVRRGVFDPLADDPAADLFALTREMTAAAGVPAYEISNHAR 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YWRY DY GIGPGAH R       VA +  K PE++L  V   G  + E 
Sbjct: 243 PGEESRHNLTYWRYRDYHGIGPGAHGR----RGGVATTRHKKPENFLAAVTAQGDGIAEH 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFSR 375
             L   +QA E ++MGLRL EG+ ++D +   G     L    +  L     + R++  R
Sbjct: 299 RVLGLREQASEAMLMGLRLTEGVDLQDLKGRFGVERAQLVEPAKLALYGDLGLVRMEGER 358

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T  GM +LD+++  + 
Sbjct: 359 LFVTDAGMPLLDALLGEIV 377


>gi|83313599|ref|YP_423863.1| coproporphyrinogen III oxidase [Magnetospirillum magneticum AMB-1]
 gi|82948440|dbj|BAE53304.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Magnetospirillum magneticum AMB-1]
          Length = 375

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 166/381 (43%), Positives = 229/381 (60%), Gaps = 7/381 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                G+Y+HWPFC+ KCPYCDFNSH     +    +  + L E+      T  R  +S+
Sbjct: 2   SPPGFGIYIHWPFCLSKCPYCDFNSHAS-LAMDHGRWRAALLAELDHFAAQTSDRIPTSV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+EP+    ++D +   W  + ++E+T+EANP+SVE + F+ +R+AG+NR+S
Sbjct: 61  FFGGGTPSLMEPETAGALVDAVKSRWAAAPDLEVTLEANPTSVEADRFRAFREAGINRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+L+ ++L FLGR H+  EA+AA+ LA+  FPRMSFDLIY+ P QT  QW  EL RA
Sbjct: 121 LGIQALDSKALAFLGRRHSVDEALAALRLAQATFPRMSFDLIYSRPGQTEAQWRTELARA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L  A +HLSLYQLTIE GT F   H  G+  LP E+ A   +  TQ +    GL AYEIS
Sbjct: 181 LDLAGEHLSLYQLTIEDGTAFAPAHGRGEFALPDEDEATAQFETTQEMCEKAGLPAYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  GAE  HNL YW+ G+++GIGPGAH R        A++  + P +WL  V  NGHA
Sbjct: 241 NHARPGAECRHNLTYWQGGEWLGIGPGAHGRFDG----FALAQARSPGTWLAQVDANGHA 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
              +  L   ++  E ++MGLRLR G+       +    LD E    +   GF+      
Sbjct: 297 TETRYALDPAERRSELVLMGLRLRNGLGPALLAEV-RPALDPEALARMIEGGFLVEDTLG 355

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T RG  +L++V+  L  
Sbjct: 356 -LRTTDRGRLVLNAVLGELLA 375


>gi|168215663|ref|ZP_02641288.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens NCTC 8239]
 gi|182382175|gb|EDT79654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens NCTC 8239]
          Length = 377

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 117/383 (30%), Positives = 208/383 (54%), Gaps = 11/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAKL-NMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+    E ++  + + G AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSV----EEYINSINEKGEAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E    S     +EF+ MGLR   GI   +++     N++    E       +G + R +
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKNRFSMNINDVYGEILNKYIDEGLLIR-E 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  +++G+ + + ++A+  +
Sbjct: 355 SGRIFLSEKGIEISNVIMADFLL 377


>gi|239948170|ref|ZP_04699923.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922446|gb|EER22470.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 400

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 158/385 (41%), Positives = 235/385 (61%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+  CPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSXCPYCDFNSHVAGN-IDHNQWLKSYETEIEYFKAIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EITIE NP+S E   F+ ++ AG+NR+S+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITIETNPTSFETEKFKAFKSAGINRVSI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  +  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDALQAIKTVEAANTIFPRVSFDLIYARSGQKLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QFANGHISLYQLTIEKGTPFYKLFKEGNLILPHSDEAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +  E LHNL YW Y +Y+GIGPGAHSR+   S  V AI +   PE WL  V      
Sbjct: 258 YAQVEHECLHNLAYWNYNNYLGIGPGAHSRIIDASSSVLAIMMWHKPEKWLDSVNTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q Q  I+ 
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQSQDLIKL 377

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 378 DKN--IYLTDKGLMLHSYIVPRLII 400


>gi|260913236|ref|ZP_05919718.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260632823|gb|EEX50992.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 384

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 213/386 (55%), Gaps = 20/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ +IQ  L ++Q      +     R++ S
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHAQKGQIPEQEYIQHLLQDLQQDLQHYKHSVQDRTLYS 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L G+ +     S++EIT+EANP + E   F+GY KAGV RI
Sbjct: 68  IFIGGGTPSLFSAEGIQQLLSGVEQLIPFKSDIEITLEANPGTAEAERFKGYVKAGVTRI 127

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA EA +A++ A+       + DL++ LP QT+T+   +L+
Sbjct: 128 SMGIQSFNDDKLKRLGRIHNAQEAKSAVNFAKVSGLKSFNLDLMHGLPNQTLTEALDDLK 187

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS YQLTIE  T+F         VLP ++   D++     + +  G   YE
Sbjct: 188 QAIKLDPPHLSWYQLTIEPNTMFAYRPP----VLPDDDELWDIFEQGHQLLTDAGYVQYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++     
Sbjct: 244 TSAYAKPDFQCQHNLNYWRFGDYLAIGCGAHGKMSFENGDILRYSKTKHPKGYMR----- 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFI 368
           G  + E++ + +E +  EF M   RL E +   ++    G   +N+  + +  L +   +
Sbjct: 299 GEYLYEEKHVVAEDRPFEFFMNRFRLLEAVPKAEFIQFTGLREKNIREQIQWALGKNYIV 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E       + T++G   L+ ++    
Sbjct: 359 ET--HHTWQVTKKGKFFLNELLEEFL 382


>gi|157828095|ref|YP_001494337.1| coproporphyrinogen III oxidase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932797|ref|YP_001649586.1| coproporphyrinogen III oxidase [Rickettsia rickettsii str. Iowa]
 gi|157800576|gb|ABV75829.1| coproporphyrinogen III oxidase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907884|gb|ABY72180.1| oxygen-independent coproporphyrinogen-III oxidase [Rickettsia
           rickettsii str. Iowa]
          Length = 400

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 156/385 (40%), Positives = 232/385 (60%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSKCPYCDFNSHVASI-IDHNPWLKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 78  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRVSI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR ++  S   AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSLVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q    I  
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTTLENILDMNNLKHYQALDLIRL 377

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 378 DEN--IYLTDKGLMLYSYIVPRLII 400


>gi|6468470|emb|CAB61616.1| hemN [Bacillus subtilis subsp. subtilis str. 168]
          Length = 366

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 117/368 (31%), Positives = 188/368 (51%), Gaps = 11/368 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  +EANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E     ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSSNTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRG 382
            +  T +G
Sbjct: 357 AVYLTHQG 364


>gi|25028747|ref|NP_738801.1| coproporphyrinogen III oxidase [Corynebacterium efficiens YS-314]
 gi|23494033|dbj|BAC19001.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium efficiens YS-314]
          Length = 401

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 125/392 (31%), Positives = 186/392 (47%), Gaps = 25/392 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWM-----------RQ 64
            GVYVH PFC  +C YCDFN++         G + ++ +   E++               
Sbjct: 11  FGVYVHVPFCSTRCGYCDFNTYTAGELGSTAGPDTYLDALEVELEMAVARLAAAHEADSD 70

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             GPR   ++F GGGTPSLI    ++ +L GI   + ++   EIT E+NP S     F  
Sbjct: 71  QPGPRPAETVFIGGGTPSLIGADGLSRVLSGIRNTFGLAPGAEITTESNPESTSPEFFDA 130

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQT 183
            R++G NRISLG+QS     LR L R H       AA       F  ++ D+IY  P +T
Sbjct: 131 LRESGYNRISLGMQSASSSVLRVLDRRHTPGRPVAAAKEARAAGFDHVNLDMIYGTPTET 190

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D Y +     
Sbjct: 191 DEDVRKTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVYADRYEMIDQRL 250

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS +            KHP  
Sbjct: 251 RANGFDWYEVSNWAKPGGECRHNMGYWVDGDWWGAGPGAHSHIGDHRFYNV----KHPAR 306

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +      +++ E L+++    E +M+GLRL++G+    +   A R +D   +R   
Sbjct: 307 YSAQIAGGELPIMDTELLTADDHHTERVMLGLRLKQGLPAGIFSPSAHRVIDRHIDR--- 363

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             G + RV    +  T  G  + D +IA++ +
Sbjct: 364 --GLLHRV-GGNIAVTDAGRLLADGIIADILL 392


>gi|269956986|ref|YP_003326775.1| oxygen-independent coproporphyrinogen III oxidase [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305667|gb|ACZ31217.1| oxygen-independent coproporphyrinogen III oxidase [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 448

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 129/419 (30%), Positives = 191/419 (45%), Gaps = 42/419 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGP 68
           T       GVYVH PFC  +C YCDFN++      G   Q ++  + L E+    ++ G 
Sbjct: 33  TTSARGRFGVYVHVPFCSVRCGYCDFNTYTASELGGGASQHSYATTALREVALAAKVLGT 92

Query: 69  -----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R +S++FFGGGTP+++   ++  IL G+   W ++ + E+T EANP SV   +  
Sbjct: 93  SGIRQRPVSTVFFGGGTPTMLPASHLVRILAGVRDAWGLAKDAEVTTEANPDSVTPESLA 152

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             R  G  R+S G+QS     L  L R H+       +  AR+    +S DLIY  P ++
Sbjct: 153 ELRAGGFTRVSFGMQSAVPSVLATLERTHDPRRIPDVVRWARDAGLDVSLDLIYGTPGES 212

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L+ A++  VDH+S Y L +E GT      + G L  P E+     Y L  ++ 
Sbjct: 213 LDDWRTSLETAIATGVDHVSAYALVVEPGTKMGAQVRRGLLPTPDEDDQATKYELADALL 272

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----------------- 286
           +  GL  YE+SN S LG E  HNL YWR  D+ GIGPGAHS +                 
Sbjct: 273 TEAGLGWYEVSNWSRLGHECRHNLAYWRGDDWWGIGPGAHSYIAAPPADSPVVEPPPVVE 332

Query: 287 -----KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
                      V     KHP  +  ++         +E L+ +    E +M+ +RLREG+
Sbjct: 333 PVETTPAPPAGVRWWNVKHPRRYAALLEAGTTPAAARELLTHDDGQLERVMLQIRLREGL 392

Query: 342 SVKDWEMLAGRNLDIECERNLQRQGFIE-RVQFS------RLRCTQRGMTMLDSVIANL 393
            +      A R +       L  QG ++ R          R   T RG  + D+V+  L
Sbjct: 393 PLDALTPSARRAVGT-----LVGQGLLDGRAALGSDGTQRRALLTLRGRLLADAVVRAL 446


>gi|309972380|gb|ADO95581.1| Putative oxidase [Haemophilus influenzae R2846]
          Length = 383

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +      YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMADYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +S   +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|255327132|ref|ZP_05368207.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           mucilaginosa ATCC 25296]
 gi|255295750|gb|EET75092.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           mucilaginosa ATCC 25296]
          Length = 428

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 120/405 (29%), Positives = 194/405 (47%), Gaps = 22/405 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQ 64
             +  G  +    +YVH PFC  +C YCDFN++        +G   +    + E+ +  +
Sbjct: 18  ATSAAGCETRDFSLYVHIPFCSVRCGYCDFNTYATEDFGDGIGLGTYAADAIAEILFAAR 77

Query: 65  LT-----GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                    R + ++FFGGGTP+ +  +++  IL      + +    E+T EANP SV  
Sbjct: 78  TLEASGVAKRPMHTVFFGGGTPTKLPARDLVRILQAAIDVFGLVEGAEVTTEANPDSVTR 137

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            + Q  +  G  R+S G+QS+  + L+ L R H  S     +  A+ +  ++S DLIY  
Sbjct: 138 EDLQTLKDGGFTRVSFGMQSVVPEVLQVLDRTHTPSNVPKVVAWAKEVGLQVSVDLIYGS 197

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++  QWE  ++ A+SY  DH+S Y L +E GT      + G+  +P E++  D+Y L 
Sbjct: 198 PGESQQQWEQSVRAAISYEPDHISAYSLIVEDGTKLAAQIRRGEYTMPDEDLMADMYLLA 257

Query: 240 QSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           + + +  G + YE+SN+S      S HNL YWR  D+ GIGPGAHS V            
Sbjct: 258 EELLTEAGYNWYEVSNYSRSEDTRSDHNLAYWRNQDWWGIGPGAHSHVNGTR----WWNV 313

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP  + + VR        +E L +  +A E +M+ +R+REG+++++   +         
Sbjct: 314 KHPVPYAQKVRAGESPAAAREVLDTATRAFETIMLMIRVREGLAMRELLAVHDEAQLGAS 373

Query: 359 ERNLQRQGFIERVQ---------FSRLRCTQRGMTMLDSVIANLA 394
            R L     IE             S +R T +G  + D+V   L 
Sbjct: 374 LRWLISHALIEPDALNSQAEPDPESHVRLTLKGRLLGDAVTRELL 418


>gi|259507808|ref|ZP_05750708.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           efficiens YS-314]
 gi|259164601|gb|EEW49155.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           efficiens YS-314]
          Length = 398

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 125/392 (31%), Positives = 186/392 (47%), Gaps = 25/392 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWM-----------RQ 64
            GVYVH PFC  +C YCDFN++         G + ++ +   E++               
Sbjct: 8   FGVYVHVPFCSTRCGYCDFNTYTAGELGSTAGPDTYLDALEVELEMAVARLAAAHEADSD 67

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             GPR   ++F GGGTPSLI    ++ +L GI   + ++   EIT E+NP S     F  
Sbjct: 68  QPGPRPAETVFIGGGTPSLIGADGLSRVLSGIRNTFGLAPGAEITTESNPESTSPEFFDA 127

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQT 183
            R++G NRISLG+QS     LR L R H       AA       F  ++ D+IY  P +T
Sbjct: 128 LRESGYNRISLGMQSASSSVLRVLDRRHTPGRPVAAAKEARAAGFDHVNLDMIYGTPTET 187

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D Y +     
Sbjct: 188 DEDVRKTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVYADRYEMIDQRL 247

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS +            KHP  
Sbjct: 248 RANGFDWYEVSNWAKPGGECRHNMGYWVDGDWWGAGPGAHSHIGDHRFYNV----KHPAR 303

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +      +++ E L+++    E +M+GLRL++G+    +   A R +D   +R   
Sbjct: 304 YSAQIAGGELPIMDTELLTADDHHTERVMLGLRLKQGLPAGIFSPSAHRVIDRHIDR--- 360

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             G + RV    +  T  G  + D +IA++ +
Sbjct: 361 --GLLHRV-GGNIAVTDAGRLLADGIIADILL 389


>gi|77165903|ref|YP_344428.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrosococcus oceani ATCC 19707]
 gi|254433846|ref|ZP_05047354.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrosococcus oceani AFC27]
 gi|76884217|gb|ABA58898.1| coproporphyrinogen III oxidase, anaerobic [Nitrosococcus oceani
           ATCC 19707]
 gi|207090179|gb|EDZ67450.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nitrosococcus oceani AFC27]
          Length = 385

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 130/370 (35%), Positives = 196/370 (52%), Gaps = 9/370 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CV+KCPYCDFNSH    K  +  +I + + +++        R I SIF G
Sbjct: 9   PLALYIHFPWCVRKCPYCDFNSHSLPEKFPETAYIDALVRDLEQDLPRVWGRRIHSIFMG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +++  +L  I      S  +EIT+EANP +VE   F  +   G+NR+SLGV
Sbjct: 69  GGTPSLFSAESLDRLLSAIRARLPWSPQIEITLEANPGTVEQGRFTEFHHIGINRLSLGV 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +++L+ LGR H++ E+  AI  A    F  ++ DL++ LP QT TQ   ++  A+S
Sbjct: 129 QSFNDEALKHLGRIHSSQESCQAIAAAHTAGFNNINLDLMFGLPGQTETQALADVAMAIS 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  H+S YQLT+E  T FY+        LP E          Q   +  G H YE+S  
Sbjct: 189 LAPHHISYYQLTLEPNTYFYRYPP----SLPHEEAINSWQTDCQVRLAQAGYHRYEVSAF 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +    +  HNLNYWR+GDY+GIG GAH ++     +H   I   KHP S+L         
Sbjct: 245 AKSDRQCQHNLNYWRFGDYLGIGAGAHGKISDAMENHITRIWKIKHPTSYLAK-AGTPEG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF-IERVQF 373
           +  +   S ++ A EF++  LRL  GI  + ++   G  + +  +   Q +   +    F
Sbjct: 304 IGGETNPSPQEAAFEFMLNALRLNGGIPSRLFQERVGLPISVVEKTLHQAEALKLIEWDF 363

Query: 374 SRLRCTQRGM 383
             +R T++G 
Sbjct: 364 RHIRPTEKGF 373


>gi|1303805|dbj|BAA12461.1| YqeR [Bacillus subtilis]
          Length = 366

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 11/368 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN +  + +   + ++ +   EM      TG   + +IF GGG
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQ-PVDEYLNALEQEMINTIAKTGQPDLKTIFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  + +  ++D I +    SS++ E  ++ANP  +     +  ++AGVNR+S GVQ
Sbjct: 62  TPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVDANPDDLSAEKLKILKEAGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + E+  L  +GR H   +   +   AR I F  +S DL++ LP QT+   E  +  ALS 
Sbjct: 122 TFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLEHSINTALSL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y L +E  T+FY + + G L LP +    ++Y +  S   AHG+H YEISN +
Sbjct: 182 DAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGIHQYEISNFA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HNL YW    Y G G GAH  +          +    + ++ ++ + G    +
Sbjct: 242 KAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPV----KHYIDLIAEKGFPYRD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFS 374
              +++E+Q +E + +GLR   G+S K +    GR+LD       ++L  +G I   + S
Sbjct: 298 THEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSLDGLFPSVLKDLAEKGLIHNSE-S 356

Query: 375 RLRCTQRG 382
            +  T +G
Sbjct: 357 AVYLTHQG 364


>gi|145630358|ref|ZP_01786139.1| coproporphyrinogen III oxidase [Haemophilus influenzae R3021]
 gi|144984093|gb|EDJ91530.1| coproporphyrinogen III oxidase [Haemophilus influenzae R3021]
          Length = 383

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 132/374 (35%), Positives = 207/374 (55%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +A G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +S   +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|163840672|ref|YP_001625077.1| coproporphyrinogen III oxidase [Renibacterium salmoninarum ATCC
           33209]
 gi|162954148|gb|ABY23663.1| oxygen-independent coproporphyrinogen-III oxidase [Renibacterium
           salmoninarum ATCC 33209]
          Length = 409

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 125/401 (31%), Positives = 192/401 (47%), Gaps = 26/401 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQ 64
           E  + G      G+Y H PFC  +C YCDFN++          Q  +  + ++E+++  +
Sbjct: 19  EQVLAGVAERGFGLYAHIPFCAVRCGYCDFNTYTAIELGGGASQAAYSGTAISEIEFAAR 78

Query: 65  LTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                    R +S++FFGGGTP+L+   ++A +L      W +    E+T EANP SV  
Sbjct: 79  AMDKSGLPARKLSTVFFGGGTPTLLPAADLAAMLRAAVGRWGLMPGAEVTTEANPDSVTR 138

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            + Q   +AG  R+S G+QS   + L+ L R H       A+  AR    ++S DLIY  
Sbjct: 139 ESLQELAQAGFTRVSFGMQSAVPKVLKVLDRTHRPERVSQAVAWAREAGLKVSIDLIYGT 198

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +++  W   ++ ALSY  DH+S Y L IE GT      + G++ +  ++   D Y L 
Sbjct: 199 PGESLEDWRSSVEAALSYQPDHISAYALIIEDGTKLAAQIRRGEVPMIDDDDHADKYALA 258

Query: 240 QSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             +  A GLH YE+SN +    +   HNL YWR  D+ GIGPGAHS +      V     
Sbjct: 259 DELLVAAGLHWYEVSNWARTPEDACQHNLAYWRGDDWWGIGPGAHSHIGG----VRWWNV 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++ + ++        +E L S  +  E +M+  RL +G+SV        R +    
Sbjct: 315 KHPIAYAQRLQTEVSPAAGREILDSSTRELERIMLATRLADGVSVSSLAESGRRAVAGLI 374

Query: 359 ERNLQRQGFIERVQF-----SRLRCTQRGMTMLDSVIANLA 394
            R        ERV+        LR T +G  M D+V+  + 
Sbjct: 375 AR--------ERVEPAAAFAGVLRLTLQGRFMADAVVREIL 407


>gi|262172431|ref|ZP_06040109.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
 gi|261893507|gb|EEY39493.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
          Length = 378

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 134/375 (35%), Positives = 200/375 (53%), Gaps = 14/375 (3%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           +KCPYCDFNSH ++  + ++ ++ + L     +++  +    PR + SIF GGGTPSLI 
Sbjct: 2   QKCPYCDFNSHAQKGDIPEQEYLDALLEDLDRDIERYQLKGDPRLLHSIFIGGGTPSLIS 61

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA +L G+A+  T   ++EIT+EANP ++E   F GYR AGV RIS+GVQS + + L
Sbjct: 62  AEGIARLLQGVAERITFKPDIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFDPEKL 121

Query: 146 RFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A++    HLS 
Sbjct: 122 VRLGRIHGQQEAVRAAQLAHQIGLTSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLSW 181

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS +S  G +  
Sbjct: 182 YQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHKKLSDAGYVQYEISGYSKPGYQCQ 237

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFL-S 322
           HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     A ++ E L +
Sbjct: 238 HNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSEQLVA 297

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQ 380
            + +  EF M   RL E     D+    G  +++          +G++        + T+
Sbjct: 298 DQDKPFEFFMNRFRLIEPCPKADFTATTGLAIEVIRPTLDWALSEGYLSE-DDQHWQITE 356

Query: 381 RGMTMLDSVIANLAV 395
           +G   L+ ++     
Sbjct: 357 KGKLFLNDLLEAFMA 371


>gi|145638622|ref|ZP_01794231.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittII]
 gi|145272217|gb|EDK12125.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittII]
 gi|309750121|gb|ADO80105.1| Putative oxidase [Haemophilus influenzae R2866]
          Length = 383

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 132/374 (35%), Positives = 207/374 (55%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHTQKGDIPEQDYIYHLLQDLQADLQRFKDAIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +A G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +S   +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|325068573|ref|ZP_08127246.1| coproporphyrinogen III oxidase [Actinomyces oris K20]
          Length = 415

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 113/402 (28%), Positives = 183/402 (45%), Gaps = 27/402 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGP--- 68
                 VY+H P+C  +C YCDFN++           E+F+ +   E++  R+       
Sbjct: 16  SERPFSVYLHVPYCRVRCGYCDFNTYTNLTMGQGASAEDFVGTLAGELRAARRAMDEAGL 75

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R++ ++F GGGTP+++   ++  +L+ + + + ++++ E+T EANP SV+        
Sbjct: 76  PVRAVQTVFVGGGTPTMLPAADLVSMLELVRECFGLAADAEVTTEANPDSVDEAGLAALA 135

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           + G  R+S G+QS     L+ L R H  +     +  AR    R S DLIY  P ++   
Sbjct: 136 EGGFTRVSFGMQSAVPHVLKVLERTHEPARVPRVVEWARRAGLRTSLDLIYGAPGESAED 195

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+  L        DH+S Y L IE+GT  +   + G+L +P ++     Y +  +     
Sbjct: 196 WQRSLDAVTRIGPDHVSAYALVIEEGTRMWGQVRRGELPMPEDDDEATKYEMADAALGQA 255

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G+E  HN  YW   D+ G GPGAHS +      V +   KHP +W  
Sbjct: 256 GYEWYEISNWARPGSECRHNQAYWLDWDWWGAGPGAHSHLGD----VRLWNTKHPVAWAG 311

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----- 361
            +      V   E + ++ +  E +M+G+RLREGI +       G       +R+     
Sbjct: 312 QIATGHLPVAGHEVIDADSRELERIMLGIRLREGIELASLGNRPGGPSAERPDRDRVTPP 371

Query: 362 --------LQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
                   L   G ++       R   T RG  M D+V   L
Sbjct: 372 HLVPVVAGLVADGLLDTAAALRGRAVLTLRGRLMADTVTRAL 413


>gi|145634540|ref|ZP_01790249.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittAA]
 gi|145268085|gb|EDK08080.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittAA]
          Length = 383

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|326381607|ref|ZP_08203301.1| coproporphyrinogen III oxidase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199854|gb|EGD57034.1| coproporphyrinogen III oxidase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 407

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 119/397 (29%), Positives = 185/397 (46%), Gaps = 23/397 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTG- 67
           T   +  L +Y+H PFC  +C YCDFN++           +++++    E+     L   
Sbjct: 20  TADAARPLSLYLHVPFCATRCGYCDFNTYTAGELGSSSSPQSWMEGVRAELDQAAALLAR 79

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R +S++F GGGTPSL+  Q +A +LD +  ++ ++   E+T E+NP S     F   R 
Sbjct: 80  GREVSTVFVGGGTPSLLGGQGLARLLDAVRDSFDLAPGAEVTTESNPESTSPEFFGALRD 139

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  RISLG+QS     L  L R H    A+ A   A    F  ++ D+IY  P +  T 
Sbjct: 140 AGFTRISLGMQSAAPHVLAVLERTHTPGRALDAAREASAAGFEHVNLDMIYGTPGERDTD 199

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               L   LS  VDH+S Y L +E GT F +  + G++ +P ++V    Y +  +  S  
Sbjct: 200 LRETLDAVLSVPVDHVSAYALIVEDGTRFARKVRRGEVPMPDDDVLAARYEMIDARLSEA 259

Query: 247 GLHAYEISNHSFLGAE--------SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           G+  YE+SN +   A+          HN  YWR  D+ G+GPGAHS V      V    +
Sbjct: 260 GMTWYEVSNWARAQADSLPAPQSVCRHNEAYWRSDDWWGVGPGAHSHVNG----VRWWNQ 315

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   +      +  +E LS      E +M+ LR+R+G+     +    +  D   
Sbjct: 316 KHPATYSASLADGALPIGGQEILSEADIHTESVMLRLRMRDGLPANLLDSGERQRADAAV 375

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            R     G +  V       T  G  + D V+ ++ V
Sbjct: 376 AR-----GLLT-VAGEAYVLTDAGRLLADGVVRDMLV 406


>gi|312883843|ref|ZP_07743560.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368301|gb|EFP95836.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 389

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 141/385 (36%), Positives = 207/385 (53%), Gaps = 14/385 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSI 74
           L +YVH P+CV+KCPYCDFNSH  + ++ ++ +I + L +++      R    PR + SI
Sbjct: 7   LSLYVHIPWCVQKCPYCDFNSHTLKAEIPEDEYIAALLQDLRDDLLRYRLNDSPRVLHSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI P+ IA +L+GI +  +   ++EIT+EANP ++E   F GY+KAGV RIS
Sbjct: 67  FIGGGTPSLISPRGIAALLNGIEQQISFQPDIEITMEANPGTIEAERFAGYQKAGVTRIS 126

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS E   L  LGR H   EAI A  LA  I     + DL++ LP QT+ Q   +L +
Sbjct: 127 IGVQSFEAAKLSRLGRIHGQEEAINAARLAHKIGLKSFNLDLMHGLPDQTIEQALADLDQ 186

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+  +  HLS YQLTIE  TLFY         LP ++   D++ +     +  G   YE 
Sbjct: 187 AIELSPPHLSWYQLTIEPNTLFY----YKQPQLPDDDDLWDIFEIGHQKLTEAGYVQYET 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNG 312
           S +S    +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP+ +L       
Sbjct: 243 SGYSKPEYQCQHNLNYWRFGDYLGIGCGAHGKLSFSDGRIIRTTKIKHPKGYLAAFDNMV 302

Query: 313 HAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
              +  E  +   ++  EF M   RL E     D+    G +L+             +I 
Sbjct: 303 KPYLSSEHNVEDAERPFEFFMNRFRLTEACPKNDFISTTGLSLNAIQPVMDWAIGLEYIT 362

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             + +  + TQ+G   L+ ++A   
Sbjct: 363 ETE-THWQVTQKGKLFLNDLLAAFM 386


>gi|223932512|ref|ZP_03624513.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis 89/1591]
 gi|302024145|ref|ZP_07249356.1| coproporphyrinogen III oxidase [Streptococcus suis 05HAS68]
 gi|330833092|ref|YP_004401917.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis ST3]
 gi|223898783|gb|EEF65143.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis 89/1591]
 gi|329307315|gb|AEB81731.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis ST3]
          Length = 375

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 206/384 (53%), Gaps = 14/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  Y+H PFC + C YCDF+    + +   + ++ + + E+++        ++ ++
Sbjct: 2   KKRPTSAYIHIPFCTQICYYCDFSKVFIKNQ-PVDEYLAALMEEVKFY----DLPALRTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +    +  +L  +     +S   E TIEANP  +  +     +K+  NR+S
Sbjct: 57  YIGGGTPSALSADQLDYLLTNLEDLLDLSQLEEFTIEANPGDLTADKIAVLKKSKCNRVS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ +++ L+ +GR+HN ++    I  L    F  +S DLIYALP QTM Q    + +
Sbjct: 117 LGVQTFDDRMLKKIGRSHNQAQIYETIATLKEAGFYNISIDLIYALPGQTMEQVVDNVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H+SLY L +E  T+F    + G+L LP+E+V  D+++        +G   YEI
Sbjct: 177 ALELDIPHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDMFDYILQELEKNGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK +R+ GH
Sbjct: 237 SNFTKPGFESRHNLMYWDNSEYYGLGAGASGYIDGMRYRNRGPI----QHYLKSIREKGH 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           + + +EFLS  +Q +E + +GLR + G+S++ +E   G + +    +  R+L+ +G ++ 
Sbjct: 293 SRLHEEFLSQTEQMEEEMFLGLRKKTGVSIERFEEKFGISFEDRYGQVVRDLKNEGLLQE 352

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +   LR T++G+ + D+V     
Sbjct: 353 -EDRWLRMTKKGLFLGDTVAERFI 375


>gi|289642697|ref|ZP_06474837.1| oxygen-independent coproporphyrinogen III oxidase [Frankia symbiont
           of Datisca glomerata]
 gi|289507527|gb|EFD28486.1| oxygen-independent coproporphyrinogen III oxidase [Frankia symbiont
           of Datisca glomerata]
          Length = 475

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 124/389 (31%), Positives = 190/389 (48%), Gaps = 18/389 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGP--R 69
           GS   GVYVH P+C   C YCDFN++        V    F+++   E +  R + GP   
Sbjct: 94  GSRPFGVYVHVPYCATHCGYCDFNTYTATELGPGVAIGTFVETLAAEFRLARSVLGPADV 153

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++S++F GGGTP+L+  +++  +L  I   + +++  E+T EANP SV+    +    AG
Sbjct: 154 AVSTVFVGGGTPTLLPAEDLERLLRMIDAEFGLAAGAEVTTEANPESVDAGALERLAAAG 213

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             RIS G+QS     L  L R H        +  AR   F  ++ DLIY  P ++   W+
Sbjct: 214 YTRISFGMQSARPHVLAALDRRHTPGRVPDVVSWARKAGFAHINLDLIYGTPGESARDWQ 273

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L   ++   DH+S Y LT+E GT   +  + G+L+ P +++  D Y   +   +A GL
Sbjct: 274 ASLDAVVALDPDHVSAYALTVEDGTRLARRIRRGELLPPDDDLMADRYQQAEETLTAAGL 333

Query: 249 HAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             YEISN +    A S HNL YWR  D+ G GPGAHS +      V     +HP S+   
Sbjct: 334 SWYEISNWARGPAAHSRHNLGYWRGADWWGFGPGAHSHIGG----VRWWNVRHPASYSAR 389

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +          E L +     E +M+ +RL EG++ ++    AGR+        L   G 
Sbjct: 390 LAAGASPAAAHEELDAAAARMERIMLEVRLAEGLAAEELT-PAGRS----QAARLAADGL 444

Query: 368 IER--VQFSRLRCTQRGMTMLDSVIANLA 394
           ++   +   R+  T RG  + D+VI  L 
Sbjct: 445 VDPPALAAGRVLLTLRGRLLADTVIHALL 473


>gi|198284083|ref|YP_002220404.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667160|ref|YP_002426738.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248604|gb|ACH84197.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519373|gb|ACK79959.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 385

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 134/389 (34%), Positives = 202/389 (51%), Gaps = 8/389 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            N T +  +S  +YVH P+C  KCPYCDFNSH    ++  E ++ + + ++         
Sbjct: 1   MNPTLKPPSSYSLYVHLPWCKAKCPYCDFNSHAA-DRIPAERYLDALIADLDRELPRIWG 59

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           RS+ ++F GGGTPSL  P+ I  ++  I       S +EIT+EANP ++E   F+ +R+ 
Sbjct: 60  RSVRTVFIGGGTPSLFPPEIIDRLISTIRARLRPHSRMEITLEANPGAIEAAYFRAFREV 119

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+ R+SLG+QS  + SL+ LGR H+A+ A  A+ LA    F   + DLI+ALP Q +   
Sbjct: 120 GITRLSLGIQSFNDDSLQRLGRIHDAAAAHRAVELAIAAEFESYNLDLIFALPGQDLAAA 179

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L+ AL YA  HLSLYQLT+E GT F          LP  + A D+ ++ +      G
Sbjct: 180 RADLRTALEYAPPHLSLYQLTLEAGTPFS---THPPADLPDSDQAADMEDILRRQLQEAG 236

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           +  YEIS H+  G    HN NYW YGDYIGIG GAH ++ +            PES++  
Sbjct: 237 MERYEISAHARPGHRCQHNRNYWLYGDYIGIGAGAHGKITLPEGIWRSRKPSRPESYMDD 296

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQ 365
                  + ++E +    +  EF++  LRL +G  V  +    G +L I     R  +R 
Sbjct: 297 ALSVLDILGDREPILPADRPFEFMLNALRLTDGFPVALFPERTGLSLQIIQPQLRQAERD 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G +  ++   LR T  G+   + +     
Sbjct: 357 GLV-IMEDGILRPTALGLNFYNDLCVRFV 384


>gi|323704204|ref|ZP_08115783.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536270|gb|EGB26042.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 378

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 122/378 (32%), Positives = 210/378 (55%), Gaps = 10/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC +KC YCDFNS+          F ++ + E++  ++       +S++ GGG
Sbjct: 7   GIYVHIPFCKRKCYYCDFNSYANMEDSFFS-FKEAIIKEIKTRKEELKD-IYTSVYIGGG 64

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++ P  I  IL  I +N+++S++ EITIE NP  ++    + Y+KAGVNRIS+G+QS
Sbjct: 65  TPNVLPPIYIEEILSEIYENYSLSNDAEITIELNPGLIDEEKLKSYKKAGVNRISIGLQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +   L+ +GR H  S+ I    LA   F  ++ D++YALP QT   ++  L   ++   
Sbjct: 125 WQNNLLKAIGRIHTVSDFIENYGLASKYFDNINIDIMYALPNQTFENFKETLTNVIALKP 184

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +EKGT  Y M++  ++ L  +   + +++    +  A+G   YEISN++  
Sbjct: 185 SHISCYGLILEKGTPLYDMYERNEIKLADDEFELMMFHYGAELLEANGYRHYEISNYALP 244

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HN  YW    Y+G GPGA+S V         +++K    ++ M+  +GHAV + +
Sbjct: 245 GFECRHNKLYWMDLHYLGFGPGAYSFVGNKRFGNIKNVKK----YIDMIYNDGHAVDDVD 300

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRL 376
            LS E +  EF+ +GLR+ +G++ KD++   G ++    +  +      G + + +   L
Sbjct: 301 ELSLEDRMSEFMFLGLRMMDGVNDKDFKERFGESMFYVFKDAIYKNMELGLLIK-EEDAL 359

Query: 377 RCTQRGMTMLDSVIANLA 394
           + TQ G+ + ++V  +  
Sbjct: 360 KLTQNGVDVSNNVFEDFL 377


>gi|319943446|ref|ZP_08017728.1| coproporphyrinogen dehydrogenase [Lautropia mirabilis ATCC 51599]
 gi|319743261|gb|EFV95666.1| coproporphyrinogen dehydrogenase [Lautropia mirabilis ATCC 51599]
          Length = 423

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 126/380 (33%), Positives = 199/380 (52%), Gaps = 10/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L VYVH P+C++KCPYCDFNSH +    V +  ++ +   ++     L   R + ++F 
Sbjct: 23  PLSVYVHIPWCLRKCPYCDFNSHNLPADGVDENAYLTALEADLDASLPLVWGRRVVTVFI 82

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL     I  +L  +     + ++ E+T+EANP + E   F  YR AGVNR+SLG
Sbjct: 83  GGGTPSLFSGAAIDRLLSSLRARLPLIADAEVTMEANPGTFERARFADYRAAGVNRLSLG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  +  L+ LGR H+ ++A AA   A  +F   + DL+YALP+QT+ +   +L +AL+
Sbjct: 143 IQSFSDAKLKALGRVHDRAQACAAAEAAAELFETFNLDLMYALPEQTLPELRADLTQALA 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  HLS Y LT+E  TLF +        +P E+ A  + +L   +        YE+S  
Sbjct: 203 FSPPHLSCYHLTLEPNTLFARFPP----PVPDEDQAAAMQDLLGEMLGD-SYRNYEVSAW 257

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ++ HNLNYW +GDY+GIG GAH ++      V  +  KHP  +++     G+A  
Sbjct: 258 ARPGHQAQHNLNYWMFGDYLGIGAGAHGKLSFPDRIVRQAKYKHPRRYMETALA-GNACE 316

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
             E +       EF++  LRL EG+    ++   G    +     R    +G +     +
Sbjct: 317 IDEVVQPTDLPFEFMLNALRLTEGVDTALFQERTGLLPAVIRVKLRQAVERGLMV-DDPA 375

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL+ T  G   L+ ++    
Sbjct: 376 RLQPTPLGRAFLNDLLEIFL 395


>gi|319775609|ref|YP_004138097.1| Fe-S oxidoreductase [Haemophilus influenzae F3047]
 gi|329122343|ref|ZP_08250930.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           aegyptius ATCC 11116]
 gi|317450200|emb|CBY86416.1| predicted Fe-S oxidoreductase [Haemophilus influenzae F3047]
 gi|327473625|gb|EGF19044.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           aegyptius ATCC 11116]
          Length = 383

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDAIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|226311614|ref|YP_002771508.1| oxygen-independent coproporphyrinogen III oxidase [Brevibacillus
           brevis NBRC 100599]
 gi|226094562|dbj|BAH43004.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brevibacillus brevis NBRC 100599]
          Length = 379

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 189/381 (49%), Gaps = 12/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  KC YCDFNS V        +++ +  +EM+          + +IF GGG
Sbjct: 4   SVYIHIPFCTNKCYYCDFNSFVTNNPQLIWDYLDALKSEMEITFSQQLIEQVKTIFVGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+ ++   +   L+ + K      + ++E ++EANP + +V   +  R+ GVNR+S GV
Sbjct: 64  TPTFLDHAQMRAFLEMVQKQLGKYWTDDIEFSMEANPGTTDVEKLRIMRELGVNRLSFGV 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L+ LGR H+      +I  A+   F   S DL++ LP QT+  +   L +A  
Sbjct: 124 QSFDDALLKRLGRIHDQEAVYRSIDNAKKVGFDNFSIDLMFGLPDQTLDIFRQTLDKAFG 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H S Y L +E+ TLF+ +++   L LPSE   +++Y +       HG   YEISN 
Sbjct: 184 LGTTHFSAYSLKVEENTLFHTLYQKDQLPLPSEETELEMYMVLIEEMERHGYKQYEISNF 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN  YW   +Y G+G GAH  V    H  A         +L+  ++ G   V
Sbjct: 244 AKPGFESKHNKTYWLNREYYGLGAGAHGYVCGHRHVNAGP----LAIYLQKCKE-GLPRV 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
           E+  +  E   +E +++GLRLREG+ +  +    G  +             +G +E  + 
Sbjct: 299 EQFEVPREDAMEEQMILGLRLREGVDLSAFASRFGATVHDVFGTIIEEEVAKGMLEE-KG 357

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             L+ T++G+ + + V A   
Sbjct: 358 GFLKLTKQGLPLGNEVFARFL 378


>gi|18311018|ref|NP_562952.1| coproporphyrinogen III oxidase [Clostridium perfringens str. 13]
 gi|168208738|ref|ZP_02634363.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens B str. ATCC 3626]
 gi|168212927|ref|ZP_02638552.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens CPE str. F4969]
 gi|18145700|dbj|BAB81742.1| probable coproporphyrinogen III oxidase [Clostridium perfringens
           str. 13]
 gi|170712995|gb|EDT25177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens B str. ATCC 3626]
 gi|170715484|gb|EDT27666.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens CPE str. F4969]
          Length = 377

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 117/383 (30%), Positives = 208/383 (54%), Gaps = 11/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAKL-NMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+EK    ++  + +   AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSVEK----YINSINEKREAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E    S     +EF+ MGLR   GI   +++     N++    E       +G + R +
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKNRFSMNINDVYGEILNKYIDEGLLIR-E 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  +++G+ + + ++A+  +
Sbjct: 355 SGRIFLSEKGIEISNIIMADFLL 377


>gi|301169184|emb|CBW28781.1| predicted oxidoreductase [Haemophilus influenzae 10810]
          Length = 383

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 131/374 (35%), Positives = 206/374 (55%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +A G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|229844377|ref|ZP_04464517.1| coproporphyrinogen III oxidase [Haemophilus influenzae 6P18H1]
 gi|229812626|gb|EEP48315.1| coproporphyrinogen III oxidase [Haemophilus influenzae 6P18H1]
          Length = 383

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|302389468|ref|YP_003825289.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200096|gb|ADL07666.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermosediminibacter oceani DSM 16646]
          Length = 374

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 127/381 (33%), Positives = 207/381 (54%), Gaps = 11/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +YVH PFCVKKC YCDFNS+     +    ++ S   E+ +   +   R ++SI+ 
Sbjct: 2   KELALYVHIPFCVKKCAYCDFNSYAETESIPL--YVDSLKREISFYSGI--NRIVTSIYI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++   ++  I++ I   + +S+++E T+EANP ++        R AGVNR+S+G
Sbjct: 58  GGGTPTVLSEGDLTSIIETIYGAFNISASLEFTVEANPETLSRRKLAVLRDAGVNRLSMG 117

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ +++ L+ +GR H A        +AR   F  ++ DLI+ LP Q++  +   L R  
Sbjct: 118 LQAFQDELLKIMGRIHTAKGFEEKFIIAREEGFDNINVDLIFGLPNQSVDDFRYSLGRLA 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             + +H+S Y LT+E+GT FY++ K+G L LPSE+    +Y+  + I    G   YEISN
Sbjct: 178 DLSPEHVSCYGLTVEEGTEFYRLQKEGRLPLPSEDEERKMYHTAREILKERGYSHYEISN 237

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNL YW YG+Y+G+G GAHS +       A  I      + + VR  G  V
Sbjct: 238 FAKPGRECRHNLVYWTYGEYLGLGAGAHSFMDGVRFYNAYGI----RDYAERVRSRGKGV 293

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
             +E LS E+Q  EF+++GLRL +G+   ++    G++ D        L ++  +     
Sbjct: 294 EGEESLSLEEQQSEFMILGLRLIKGVRKAEFYKRFGKDPDSVYGSVLELLKKKELVTEDG 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             +R T+RG+ + +       
Sbjct: 354 EYIRLTERGLDLANEAFVEFL 374


>gi|168486104|ref|ZP_02710612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1087-00]
 gi|183570777|gb|EDT91305.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pneumoniae CDC1087-00]
          Length = 376

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +    E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLYVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
            + ++ LS ++Q +E + +GLR + G+S+  +E   G++      E  R+L +QG + ++
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSFAGLYGEIVRDLVQQGLM-QI 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T+RG+ + D+V     +
Sbjct: 352 EGDHVRMTKRGLFLGDTVAERFIL 375


>gi|114571550|ref|YP_758230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Maricaulis maris MCS10]
 gi|114342012|gb|ABI67292.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Maricaulis maris MCS10]
          Length = 389

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 149/393 (37%), Positives = 214/393 (54%), Gaps = 14/393 (3%)

Query: 11  MTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           MTG G     N+LG+Y+HWP+C + CPYCDFN +  R K   E  + + L +M   R  T
Sbjct: 1   MTGTGDRQLGNALGLYLHWPYCARICPYCDFNVY--RPKGDDEALLSAILADMADWRDKT 58

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G R ++S+ FGGGTPSL++P  IA ++D     W      EI +EANP   +   F    
Sbjct: 59  GGRRLASLHFGGGTPSLMKPDWIARVIDAADSLWGFEDGAEIGLEANP--ADRARFAAIG 116

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           K GV R+SLGVQS +++ L  LGR+H+ ++A  AI  A + F R+S D+IYA   QT   
Sbjct: 117 KVGVARLSLGVQSFDDRVLAALGRDHDGAQARQAIEAALSAFERVSVDMIYAQSGQTNDA 176

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ EL  AL+    H+S YQLTIE GT F K  + G+ +    + A  LY  TQ++ ++ 
Sbjct: 177 WKRELGEALTSGAGHVSAYQLTIEPGTAFGKRSERGETLAVDGDGAAVLYEATQTLCASQ 236

Query: 247 GLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPES 303
           G  AYE+SNH+     +S+HN  YW  GD+IG+GPGAH R+       RVA +  + P  
Sbjct: 237 GFPAYEVSNHARSPADQSVHNRIYWEGGDWIGVGPGAHGRLGQSTLDGRVATTACRRPID 296

Query: 304 WLKMVRKNGHAV--VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           ++  V   G  V     E L+      E   +GLR+ +G+ +       G  L+ E    
Sbjct: 297 YITAVNTTGSGVGADGTERLAPGDDLVERAFLGLRVTDGLDLDHLHRTTGVALNAEAIDR 356

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +   GF++R    RLR T++G  + D V   + 
Sbjct: 357 MIGDGFLQRA-GVRLRLTEQGRLLADRVTREIL 388


>gi|222529543|ref|YP_002573425.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456390|gb|ACM60652.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 376

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 209/381 (54%), Gaps = 9/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC +KC YCDF S+          +  +   E+ + ++      I +I+ 
Sbjct: 2   RNIGLYIHVPFCKRKCYYCDFVSYENVNDDVIFAYFSALENELIYYKE-NYDIEIDTIYL 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I    I  +L+ I  N+ + SN EITIEANP S+     Q Y  AGVNR+S+G
Sbjct: 61  GGGTPSSISANYILKLLEFICSNFKIKSNCEITIEANPESITHKKLQSYSLAGVNRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  LR +GR H++  A+  +      F   S D+I  LP QT   +   L   L 
Sbjct: 121 IQSLNDVELRAIGRVHDSEVALKILSRVPLYFENFSVDVITGLPYQTFKSFMQTLNTLLE 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  H+S+Y L IE+GT  ++ +++   +LPSE+    ++   + I S  G++ YEISN 
Sbjct: 181 FSPPHVSIYSLKIEEGTFLFERYEEYKSLLPSEDEERRMFWWAKRILSEIGIYHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW   +YIG+G  AHS      +    +I +    ++K +++NG A+ 
Sbjct: 241 AKKGFECKHNLKYWNVEEYIGVGCAAHSFFNGCRYYNTSNINE----YVKKIKENGLAIE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
           EKE +S E++  EF+++GLR  EG+S++++    G   + +       L++ G IE V  
Sbjct: 297 EKEIISCEEREKEFIILGLRKIEGLSLEEFRKRFGVEFERKYNSQIEKLKKYGLIE-VSN 355

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           + LR T+RG+ + + V     
Sbjct: 356 NYLRLTERGIDLANLVWMEFV 376


>gi|257878503|ref|ZP_05658156.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,230,933]
 gi|257812731|gb|EEV41489.1| coproporphyrinogen III oxidase [Enterococcus faecium 1,230,933]
          Length = 381

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 10/377 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               N +  Y+H PFC   C YCDFN      +   + +++  L EM+ M +     ++ 
Sbjct: 6   NPAENKVSAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVEMLLNEMRLMLESHPTANLE 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +  + +  +L G  +     +  E T+EANP  +     Q  +  GVNR
Sbjct: 65  TLYVGGGTPTSLSAKQLDRLLSGAREILPFQNGNEFTVEANPGDLTREKLQVMKNYGVNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ+ + + L+ +GR H A +    +  L    F  +S DLIYALP QT+  +   L
Sbjct: 125 LSMGVQTFDNRLLKKIGRKHTAEDVYQTMQFLEAENFTNVSIDLIYALPGQTLEGYRDTL 184

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL+  + H SLY L +E  T+F    + G L LP +     ++  T      HG H Y
Sbjct: 185 EKALALDLPHYSLYSLILENKTMFMNWVRQGRLELPDQETETRMFEETIEAMEKHGRHQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN    G ES HNL YW    Y G G GA   +    +R    I    + +L+ +R N
Sbjct: 245 EISNFGLSGHESQHNLMYWNNDHYFGFGAGASGYLGDIRYRNKGPI----QHYLRPLRAN 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              V+E+E L+ + Q +E + +GLR + GI+ K +     + ++    +  R L+++G +
Sbjct: 301 ERPVLEEEKLTRKNQIEEEMFLGLRKKTGITKKHFYDRYQKTIESVYGDVLRELEQEGLL 360

Query: 369 ERVQFSRLRCTQRGMTM 385
              +  R+  T RG   
Sbjct: 361 VN-EEDRVYLTPRGTFF 376


>gi|254452932|ref|ZP_05066369.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 238]
 gi|198267338|gb|EDY91608.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 238]
          Length = 382

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 166/379 (43%), Positives = 233/379 (61%), Gaps = 11/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+HWPFC  KCPYCDFNSHV    V Q  +  +F  E+  +  +TG R ++S+FFGG
Sbjct: 10  FGLYIHWPFCQAKCPYCDFNSHVV-ASVDQTRWAAAFEKEIDRIADMTGDRVLNSVFFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++   +  IL  I K W +++++E+T+EANP+S+E   F GY  AGVNR+S+GVQ
Sbjct: 69  GTPSMMDVSTVDRILTRIQKRWRLANDLEVTLEANPTSIEAQRFAGYYAAGVNRVSVGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L +  L+ LGR H+A EA+AA+ +AR  F R+SFDLIYA   Q++ QW+ EL RAL + 
Sbjct: 129 ALNDADLKALGRLHSADEAMAAVEIARTTFDRVSFDLIYARQDQSVGQWQAELTRALEFE 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            DHLSLYQLT+E GT F    K G L  LP+E++  DL+++TQ      GL AYE+SNH+
Sbjct: 189 PDHLSLYQLTVEDGTAFGDRFKRGLLRGLPNEDLGADLWDVTQDACEKAGLPAYEVSNHA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +G ES HNL YW+ GD+ GIGPGAH R+ +   R      K P  W+  V      +  
Sbjct: 249 KIGQESRHNLIYWQSGDWAGIGPGAHGRLTLDGVRRETVCVKSPGMWIAQVESGALDLDT 308

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV-KDW-EMLAGRNLDIECERNLQRQGFIERVQFSR 375
              L +    +E ++MGLR+ EGI +  DW      +         L   G +ER    R
Sbjct: 309 GSALGASDILEERVLMGLRMVEGIEMSADWMTDKFNK------INELVVIGHLERTTN-R 361

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T +G  +L++VI++L 
Sbjct: 362 LTVTAQGRPVLNAVISHLL 380


>gi|289209632|ref|YP_003461698.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
 gi|288945263|gb|ADC72962.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
          Length = 400

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 211/382 (55%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  R +V  + ++++ + +++        R + S+F G
Sbjct: 9   PLALYVHLPWCVRKCPYCDFNSHEPRGEVPFDAYVEALMRDLESQLPDVWGRRVDSVFIG 68

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ +A +L G+     +  + EIT+EANP + +   F GYR+AGVNR+SLG+
Sbjct: 69  GGTPSLFPPEALADLLSGLRARLPLRPDAEITLEANPGTADRAYFHGYREAGVNRLSLGI 128

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H  +EA AA+  AR   F  ++ DL++ LP+Q++     +L+ A+ 
Sbjct: 129 QSFDDVMLERLGRIHGGAEAHAAVEHARAAGFDNINLDLMFGLPQQSVEAGLADLRAAIE 188

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S YQLT+E  T F         VLP ++   +L+   Q   +A G   YE+S +
Sbjct: 189 QEPEHISWYQLTLEPNTYFAARPP----VLPPDSTIEELFTQGQCALAAAGYTRYEVSAY 244

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHA 314
           +  G E  HN NYW +GDY+GIG GAH ++ + S    +  +  + P ++L+   ++   
Sbjct: 245 ATRGRECRHNRNYWTFGDYLGIGAGAHGKLTLPSQGRVLRRTKPRQPAAYLETPDQHR-- 302

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQ 372
               + +   +   EF++  LRL EG+    +E   G +L         L+ +G +    
Sbjct: 303 ---DQAVPEAELPFEFMLNALRLVEGVPAHCFEERCGLDLTTLEPALGELRAEGLLV-SD 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             RL+ T+RG+  L+ ++    
Sbjct: 359 PQRLQPTERGLAFLNDILERFL 380


>gi|169634496|ref|YP_001708232.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii SDF]
 gi|169153288|emb|CAP02394.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii]
          Length = 384

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 132/393 (33%), Positives = 211/393 (53%), Gaps = 16/393 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   RSI S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F G
Sbjct: 61  LAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+     H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKTAVEQGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           +L  V      + + E   +++   EF+M  LRL +G+  + +E   G +L+   +   +
Sbjct: 296 YLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELYEQRTGLSLNDLNDVLTS 352

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ +  +      RL CT++G   L+SV+    
Sbjct: 353 LRSRKLLVE-DSGRLACTEQGHIFLNSVLEEFL 384


>gi|302519006|ref|ZP_07271348.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB78]
 gi|302427901|gb|EFK99716.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB78]
          Length = 413

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 122/400 (30%), Positives = 195/400 (48%), Gaps = 22/400 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
              + G     LG Y+H P+C  +C YCDFN++      G       ++N+  +   E++
Sbjct: 22  AQALDGAAGRPLGFYLHVPYCASRCGYCDFNTYTASELRGTGGVLASRDNYADTLAQEIR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR   ++FFGGGTP+L+   ++  +L  +   + ++ + E+T EANP SV+
Sbjct: 82  LARRVLGEDPRPARTVFFGGGTPTLLPAADLVRMLAAVRDEFGLAPDAEVTTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  R+ G NRIS G+QS +   LR L RNH      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLETLREGGFNRISFGMQSAKPHVLRVLDRNHTPGRPEACVAEARAAGFAHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L+ A+    DH+S Y L +E+GT   +  + G++ +  ++   D Y 
Sbjct: 202 GTPGESDADWRASLEAAIGAGPDHVSAYALIVEEGTGLARRIRRGEIPMTDDDEHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +   + +  G   YE+SN +    A  LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IADELLAKAGFSWYEVSNWATSEPARCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP ++   +         +E L  E +  E +++ LRL EG  + D  + AGR    
Sbjct: 318 NVKHPGAYAAALAGGRSPGAGRELLGEEDRRVERILLELRLSEGCPL-DLLLPAGRG--- 373

Query: 357 ECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
              R+L   G ++   +       T RG  + D+V+ +L 
Sbjct: 374 AAARHL-GDGLLDPGAYAKGAAVLTLRGRLLADAVVRDLV 412


>gi|332527982|ref|ZP_08404016.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rubrivivax benzoatilyticus JA2]
 gi|332112556|gb|EGJ12349.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rubrivivax benzoatilyticus JA2]
          Length = 405

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 134/396 (33%), Positives = 212/396 (53%), Gaps = 15/396 (3%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH----VRRYKVGQENFIQSFL 56
           +++L      +       L +Y+H P+C++KCPYCDFNSH     R     Q  ++ + +
Sbjct: 10  LRWLKP--GAVRLDALPPLSLYLHVPWCLRKCPYCDFNSHELGGGRPDAALQSRYVAALI 67

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            +++    L   R + S+F GGGTPSL+EP  +  +L  +     +    EIT+EANP +
Sbjct: 68  ADLEAALPLVWGRPVISVFIGGGTPSLLEPAMVDRLLAAVRARLPLEPGCEITLEANPGT 127

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
            E   F  +R AGV R+S+GVQS ++ +L  +GR H+ ++A AA+  A   F   + DL+
Sbjct: 128 FERERFAAFRAAGVTRLSVGVQSFDDAALAAIGRVHDGAQARAALEEAARAFDTFNLDLM 187

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           YALP Q +     +L  ALS+A  HLS+Y L++E  T F     +    LP +++A D+ 
Sbjct: 188 YALPGQDLAALARDLDTALSFAPPHLSIYHLSLEPNTRFATRPPE---GLPDDDLASDML 244

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           +L    T+A GL  YE+S  +  G   +HN NYW +GDY+G+G GAH ++      V   
Sbjct: 245 DLIAERTAASGLARYEVSAFARPGHRCVHNQNYWHFGDYLGLGAGAHGKLSFAERVVRQV 304

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--- 353
             + P+++++     GHAV  +  + + +   EF++  LRLREG     +    G +   
Sbjct: 305 RWREPQAYVEQALA-GHAVSNEHEVGAAELPFEFMLNALRLREGFEPGLFAERTGLSPTA 363

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           L+    + L R G +ER Q +RL  T RG   L  +
Sbjct: 364 LEPGLTQALAR-GLLER-QGTRLVPTVRGFDFLSDL 397


>gi|212212915|ref|YP_002303851.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuG_Q212]
 gi|212011325|gb|ACJ18706.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuG_Q212]
          Length = 375

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 130/384 (33%), Positives = 202/384 (52%), Gaps = 21/384 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        + + I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLFEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK        LP+++   ++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYKHPP----ALPTDDYIWEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++         + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDA---QKPFIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDIECERNLQRQGFIE 369
            ++ L+  +   EF+M  LRL++ I +  +    G +       L+   ERNL +     
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPLTLFTERTGLSPSVLVPWLETAKERNLLQ----- 352

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
                 L  T  G   L+ ++ +L
Sbjct: 353 -CDNKYLTVTPLGHRFLNELLISL 375


>gi|330469604|ref|YP_004407347.1| oxygen-independent coproporphyrinogen III oxidase [Verrucosispora
           maris AB-18-032]
 gi|328812575|gb|AEB46747.1| oxygen-independent coproporphyrinogen III oxidase [Verrucosispora
           maris AB-18-032]
          Length = 409

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 123/388 (31%), Positives = 192/388 (49%), Gaps = 15/388 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG---P 68
           G    GVYVH PFC  +C YCDFN++  +   G   ++ +  + L E+    ++ G   P
Sbjct: 28  GDQGFGVYVHVPFCASRCGYCDFNTYTAQELGGGASRDGYADTVLAELALAARVLGDRPP 87

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R + ++F GGGTP+L+   ++A ILD I + W ++++ E+T EANP SV   + +  R A
Sbjct: 88  RRVETVFVGGGTPTLLPADDLARILDAIDRTWGLAADAEVTTEANPESVTPASLKELRAA 147

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           G  RISLG+QS+    L  L R H+A  A  AA+      F  ++ DLIY  P +    +
Sbjct: 148 GYTRISLGMQSVAPGVLAVLDRRHSAGRATAAALEARDAGFDHVNLDLIYGTPGEQPEDF 207

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L + ++   DH+S Y L +E GT      + G+L  P ++VA D Y   ++   A G
Sbjct: 208 AASLDQVVAAGADHVSAYALIVEDGTRLAARMRRGELPYPDDDVAADRYLAAEAALDAAG 267

Query: 248 LHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
              YE+SN +        HNL YW  GD+ G+GPGAHS V      V     KHP ++ +
Sbjct: 268 FSWYEVSNWARTPSGRCRHNLLYWTGGDWWGLGPGAHSHVGG----VRWWNVKHPTAYAQ 323

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +       + +E L++++   E +M+ LRL +G+ +   +              L    
Sbjct: 324 RLAAGRSPGLAREVLTADEARMEEVMLRLRLADGLPLDVLDDAGRAAAARAVADGLLAAP 383

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
                   R   T RG  + D+V+ +L 
Sbjct: 384 ---AHAAGRGVLTLRGRLLADAVVRDLL 408


>gi|298243929|ref|ZP_06967736.1| oxygen-independent coproporphyrinogen III oxidase [Ktedonobacter
           racemifer DSM 44963]
 gi|297556983|gb|EFH90847.1| oxygen-independent coproporphyrinogen III oxidase [Ktedonobacter
           racemifer DSM 44963]
          Length = 414

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 194/386 (50%), Gaps = 17/386 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-----QLTGPRSISSI 74
            +Y+H PFC  +C YCDFN++     + +E ++++ L E++            PR   +I
Sbjct: 33  SLYLHIPFCHTRCYYCDFNTYAGILPL-REPYVRALLHEIELAGLQARHPDGTPRRSRTI 91

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+    I  +LD   + + + S  EIT+EANP ++      G R+AG+NR+S
Sbjct: 92  FFGGGTPSLLTVAQITRLLDTCRQAFALDSEAEITLEANPGTLSQEQLVGIREAGINRLS 151

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS +   L+ LGR HN  E   A+  AR   F  ++ D ++ LP QTM  W   L R
Sbjct: 152 MGAQSYDAALLQKLGRIHNPDEITQAVQFARAAGFTSINLDFMFGLPDQTMQHWRETLDR 211

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL    +H SLY L IE+GT F++   +  +    E++  D+Y        A G   YEI
Sbjct: 212 ALDLHPEHFSLYSLIIEEGTPFHQWVAEKRITPGDEDLCADMYEYADERLRAAGYINYEI 271

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G  S HNL YW+   YIG+G GA S      +    + E+ P++++K ++ +  
Sbjct: 272 SNWALPGHHSRHNLTYWQNLPYIGMGAGASSFFGKKRY----TDERDPQAYIKRLKSDEI 327

Query: 314 AVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFI 368
            V+  E E +   Q   E   +GLR   G+ +  +E    +         L      G +
Sbjct: 328 PVIESESEEVDQAQAMSETAFLGLRTAMGLHLPTFERRFAQPFAQFVGDRLHIVDEAGLL 387

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E+V    LR +QRG  + + V   L 
Sbjct: 388 EQV-GDWLRLSQRGRLLGNEVFLRLL 412


>gi|289422296|ref|ZP_06424147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus anaerobius 653-L]
 gi|289157301|gb|EFD05915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus anaerobius 653-L]
          Length = 378

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 204/380 (53%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF S+V R +    +++ S   EM     +     I SIF GGG
Sbjct: 6   AIYIHIPFCAKKCYYCDFTSYVGRDEE-INSYLDSLEKEMDLY--MDKKEDIYSIFIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P  +  +   I K   + S  E TIE+NP ++  +  +  +K GVNR+S+G+Q+
Sbjct: 63  TPSLLSPDQLDRLFGIIEKKVNLESLCEYTIESNPGTLTRDKLRTMKKHGVNRLSMGLQA 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++++ L+F+GR H+  + + +   AR      ++ DLI+A   QT+  W+  L++ ++  
Sbjct: 123 VQDKHLKFMGRIHDMDQFVESFEFARQEGLENINVDLIFAFEGQTLEDWKESLEKVVAMN 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y L IE+GT FY+M++DG L    E+  + +Y  T       G H YEISN++ 
Sbjct: 183 PDHISAYSLIIEEGTTFYRMYQDGRLNDFDEDTYISMYRYTVEKLKDSGYHQYEISNYAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HN+ YW   +Y G G GA   +    +    +  K+ + +++ +      +  K
Sbjct: 243 EGCECKHNILYWDCLNYYGFGLGASGFIGDVRY----TNTKNMKDYMEDLDNKKKPIEFK 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           E ++S+ + +E +++GLR  EGI +    + L  +  +  +   +N   +G +  V   R
Sbjct: 299 EVIASKDRFNEKIILGLRKNEGILLDTVTKYLTDKEENDFMVKVKNYIDKGLL-LVDNGR 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR  Q G  + +S+  +L V
Sbjct: 358 LRLGQEGREVSNSIFVDLMV 377


>gi|56963421|ref|YP_175152.1| coproporphyrinogen III oxidase [Bacillus clausii KSM-K16]
 gi|56909664|dbj|BAD64191.1| oxygen-independent coproporphyrinogen oxidase III [Bacillus clausii
           KSM-K16]
          Length = 388

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 191/380 (50%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDFN      +   + +I + + EM+  R       + +I+ GGG
Sbjct: 4   SLYVHIPFCEHICHYCDFNKVFIENQ-PVDAYIDALIEEMKQARARRRDGLVKTIYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +   I   + +S+  E T+E NP S + +     ++ GVNR+S+G Q+
Sbjct: 63  TPTALTAIQLERLFSAIESLFDLSALEEWTVEVNPDSADEDKLGVMKRYGVNRLSIGAQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L  +GR H+      A+  AR+  F  +S DL+  LP Q++  +E  + RALS  
Sbjct: 123 FNQKLLADIGRTHSPEGVEQAVRKARSLGFTNLSIDLMLGLPNQSVADFERSVDRALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L IEK T+FY  +K G L LP E+  V +Y L +  T+A GL  YEISN   
Sbjct: 183 VEHISAYALKIEKQTVFYNRYKKGQLHLPPEDDDVAMYELLKKKTAAAGLDQYEISNFGK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YWR   Y G G GA        ++    + K    +++ V   G   +  
Sbjct: 243 PGYESKHNLVYWRNEPYAGFGAGASGYENQVRYQNINPVAK----YIEAVWATGEPRLRT 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             +S  +  +E + +GLR+R GI+  D+    G +++    + +    R+G +E      
Sbjct: 299 HVVSRAECLEEAVFLGLRIRSGINKADFFARYGLDVESLFAKEIAEGKRKGLLEENDH-V 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +R T+ G+ + +   A    
Sbjct: 358 IRLTENGLLLGNEAFALFVA 377


>gi|260583842|ref|ZP_05851590.1| oxygen-independent coproporphyrinogen III oxidase [Granulicatella
           elegans ATCC 700633]
 gi|260158468|gb|EEW93536.1| oxygen-independent coproporphyrinogen III oxidase [Granulicatella
           elegans ATCC 700633]
          Length = 381

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 205/380 (53%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V       + ++   + EMQ   +      + +++ GGG
Sbjct: 6   AAYIHIPFCSHICYYCDFNK-VFIEGQPVDEYVDLLVREMQLRAKAHPISPLETLYIGGG 64

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS + P+ +A + +GI +   +  N E T+E NP   ++   +  ++ GVNRIS+GVQS
Sbjct: 65  TPSTLTPKQLATLFEGIHRYLPLEKNCEFTMELNPDDGQMERLEVMKEYGVNRISMGVQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ +GR H+    + +I  AR   F  +S DLI+ LP+QT+  +E  L+ A+   
Sbjct: 125 FNDELLKKIGRKHSKKTVLESIGNARKLGFENISIDLIFRLPQQTIQDFEDSLKIAMDLD 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S+Y L +E+ T+FY + + G L LP+++   D++ L      + G H YEISN++ 
Sbjct: 185 LPHYSIYSLILEQKTVFYNLMRQGKLPLPTQDEEADMFQLAMDSMESFGRHHYEISNYAL 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL+YW+  +Y+G G GAH  +    ++    I    + +L+ +R     +++K
Sbjct: 245 PGFESRHNLHYWKADEYLGFGAGAHGYLNQERYQNCGPI----QHYLEPLRNFALPILQK 300

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           + LS + Q +EF+ +GLR   G+S  +++   GRN++    +   +L  Q  I+      
Sbjct: 301 DVLSKKSQIEEFMFLGLRKMSGVSNLEFKRRFGRNMNEIYQDIIEDLLEQELIQLTTEG- 359

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T +G  + ++V     +
Sbjct: 360 IALTHKGKFLGNNVFQAFLL 379


>gi|118618922|ref|YP_907254.1| coproporphyrinogen III oxidase [Mycobacterium ulcerans Agy99]
 gi|118571032|gb|ABL05783.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium ulcerans Agy99]
          Length = 390

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 118/388 (30%), Positives = 187/388 (48%), Gaps = 13/388 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
            +        G+Y+H PFCV +C YCDFN++      G   + ++ +  +E++       
Sbjct: 12  ALLPSPGRPFGLYLHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLLALRSELELAAARLN 71

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             +++++F GGGTPSL+  Q +  +LD +  ++ ++ +VEIT EANP S     F   R 
Sbjct: 72  APTVNTVFVGGGTPSLLGGQRLTTLLDMVRDHFVLAPDVEITTEANPESTWPEFFDAIRS 131

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS+  + L  L R H+   A AA   A       ++ DLIY  P +T   
Sbjct: 132 AGYTRVSLGMQSVAPRVLATLDRVHSPGRASAAAREAFAAGFEHVNLDLIYGTPGETDDD 191

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +  A+   VDH+S Y L +E GT   +  + G+L     +V    Y L  +  +A 
Sbjct: 192 LLRSIDAAIEAGVDHVSAYALVVEDGTAMARRVRQGELPPVDNDVLAHRYELADARLTAA 251

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YE+SN +  G E  HNL YW  G + G GPGAH  V            KHP ++ +
Sbjct: 252 GLAWYEVSNWARPGGECRHNLGYWNGGQWWGAGPGAHGYVGATR----WWNVKHPNTYAE 307

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           ++  +   V   E L  +    E +M+GLRLR+G+ +   +       + E  +     G
Sbjct: 308 ILAGSSLPVAGLERLEEDALHTEEVMLGLRLRQGLPLAHLDA-----GERERAQAAVADG 362

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +   +   +  T RG  + D+V+  L 
Sbjct: 363 LLT-AEGDSVVLTDRGRLLADAVVRTLL 389


>gi|188534962|ref|YP_001908759.1| coproporphyrinogen III oxidase [Erwinia tasmaniensis Et1/99]
 gi|188030004|emb|CAO97888.1| Putative oxygen-independent coproporphyrinogen III oxidase [Erwinia
           tasmaniensis Et1/99]
          Length = 378

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 211/383 (55%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  E ++Q  L ++     LT  R + ++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHEEYVQHLLNDLDTDLPLTSGREVGTVFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     +S + EIT+EANP +VE + F  Y++AG+NRIS+GV
Sbjct: 66  GGTPSLLSGEAMQMLLDGVRARLPLSPDAEITMEANPGAVEADRFSSYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     + SA G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPP----RLPDEDDLWDIFEQGHQLLSAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++       +  S  +HP  ++     +G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGTIIRTSKTRHPRGFM-----SGNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  ++  ++  EF M   RL E     ++    G     +  + +  L + G++    
Sbjct: 297 DKRCEVADAEKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSVRAQIDTALAK-GYLTETA 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 356 -EYWQVTEKGKLFLNSLL-ELFL 376


>gi|302871651|ref|YP_003840287.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574510|gb|ADL42301.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 378

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 204/381 (53%), Gaps = 9/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDF S+          +  S  +E+ + ++      I +I+ 
Sbjct: 4   RKIGLYIHIPFCKKKCYYCDFVSYENANDNLVFEYFSSLESELIFYKE-NYEFEIDTIYI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I  + I  + + I  N+ +  N EITIEANP S+     Q Y  AGVNR+S+G
Sbjct: 63  GGGTPSFISAKYILKLFEFIYSNFKIKDNYEITIEANPESITHEKLQSYSLAGVNRLSVG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  L+ +GR HN+  A+ ++ +    F   + D+I  LP Q    +   L + L 
Sbjct: 123 IQSLNDTELKAIGRIHNSEVALKSLSIVPLYFENFNVDVIVGLPYQNFESFMQTLNKLLD 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  H+S+Y L IE+GT  ++ ++  +  LPSE+    ++   + I    G   YEISN 
Sbjct: 183 FSPPHISIYSLKIEEGTPLFENYEKYESFLPSEDEERKMFWCAKRILFETGFCHYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW   +YIGIG  AHS      +    +I +    ++  ++KNG AV 
Sbjct: 243 AKKGFECKHNLKYWNCNEYIGIGCAAHSYFDGYRYYNTSNISE----YINKIKKNGLAVE 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
            KEF+S E+   EF+++GLR  EG S+ ++    G + + +       L++ G IE ++ 
Sbjct: 299 GKEFISVEESEKEFIILGLRKIEGFSLNEFRERFGADFERKYKYQIEKLKKYGLIE-IEK 357

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           + ++ T+RG+ + + V     
Sbjct: 358 NCVKLTERGIDLANLVWQEFV 378


>gi|262147277|ref|ZP_06028076.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
 gi|262031271|gb|EEY49886.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
          Length = 375

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 135/375 (36%), Positives = 199/375 (53%), Gaps = 14/375 (3%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           +KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR + SIF GGGTPSLI 
Sbjct: 2   QKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHSIFIGGGTPSLIS 61

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RIS+GVQS E + L
Sbjct: 62  AEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFEPEKL 121

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A++    HLS 
Sbjct: 122 ARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLSW 181

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS +S  G +  
Sbjct: 182 YQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQYEISGYSKPGYQCQ 237

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFL-S 322
           HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     A ++ E L +
Sbjct: 238 HNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSEQLVA 297

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQ 380
            + +  EF M   RL E     D+    G  +D+          +G++        + T+
Sbjct: 298 DQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEGYLSE-DDQHWQITE 356

Query: 381 RGMTMLDSVIANLAV 395
           +G   L+ ++     
Sbjct: 357 KGKLFLNDLLEAFMA 371


>gi|237807734|ref|YP_002892174.1| oxygen-independent coproporphyrinogen III oxidase [Tolumonas
           auensis DSM 9187]
 gi|237499995|gb|ACQ92588.1| oxygen-independent coproporphyrinogen III oxidase [Tolumonas
           auensis DSM 9187]
          Length = 381

 Score =  349 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 131/388 (33%), Positives = 207/388 (53%), Gaps = 25/388 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V + +++ + L ++         R + SIF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKQEVPETDYVAALLADLDADLAYVQGRQLQSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     I ++L G+A     + ++EIT+EANP +VE   F GY++AGV RIS+GV
Sbjct: 66  GGTPSLFSAAAIKVLLQGVATRIPFADDIEITLEANPGTVEAGRFAGYQQAGVTRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L+ LGR H+  +A+AA +   +      + DL++ LP+QT++    +LQ+A+ 
Sbjct: 126 QSFQPEKLQRLGRIHDPKQAVAAGLQARQAGLRSFNIDLMHGLPEQTISDALFDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F         VLP +    D+      +  A G   YEIS +
Sbjct: 186 IAPPHLSWYQLTIEPNTAFGSRPP----VLPEDETLWDIQEQGHQLLLAAGYRQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G E  HNLNYW++GDY+GIG GAH ++ +      +  +  KHP+ +L         
Sbjct: 242 AKPGYECRHNLNYWQFGDYLGIGCGAHGKITLPAEDRIIRTAKVKHPKGYLD-------- 293

Query: 315 VVEKEFLSS------EQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQG 366
             E+ FL        + +  E+ M  +RL + I   ++      + +      +    QG
Sbjct: 294 -PERTFLDQCWNVENDDRPFEYFMNRMRLFQPIPKNEFIARTSLSAESVEPLFKRAYEQG 352

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +E+ +    + T+ G   L+S++  L 
Sbjct: 353 LLEQTESE-WQVTETGHRYLNSLLTMLM 379


>gi|183983689|ref|YP_001851980.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium marinum M]
 gi|183177015|gb|ACC42125.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium marinum M]
          Length = 390

 Score =  349 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 118/388 (30%), Positives = 187/388 (48%), Gaps = 13/388 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
            +        G+Y+H PFCV +C YCDFN++      G   + ++ +  +E++       
Sbjct: 12  ALLPSPGRPFGLYLHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLLALRSELELAAARLN 71

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             +++++F GGGTPSL+  Q +  +LD +  ++ ++ +VEIT EANP S     F   R 
Sbjct: 72  APTVNTVFVGGGTPSLLGGQRLTTLLDMVRDHFVLAPDVEITTEANPESTWPEFFDAIRS 131

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS+  + L  L R H+   A AA   A       ++ DLIY  P +T   
Sbjct: 132 AGYTRVSLGMQSVAPRVLATLDRVHSPGRASAAAREAFAAGFEHVNLDLIYGTPGETDDD 191

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +  A+   VDH+S Y L +E GT   +  + G+L     +V    Y L  +  +A 
Sbjct: 192 LLRSVDAAIEAGVDHVSAYALVVEDGTAMARRVRQGELPPVDNDVLAHRYELADARLTAA 251

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YE+SN +  G E  HNL YW  G + G GPGAH  V            KHP ++ +
Sbjct: 252 GLAWYEVSNWARPGGECRHNLGYWNGGQWWGAGPGAHGYVGATR----WWNVKHPNTYAE 307

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           ++  +   V   E L  +    E +M+GLRLR+G+ +   +       + E  +     G
Sbjct: 308 ILAGSSLPVAGLERLEEDALHTEEVMLGLRLRQGLPLAHLDA-----GERERAQAAVADG 362

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +   +   +  T RG  + D+V+  L 
Sbjct: 363 LLT-AEGDSVVLTDRGRLLADAVVRTLL 389


>gi|293610193|ref|ZP_06692494.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827425|gb|EFF85789.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 384

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 134/393 (34%), Positives = 211/393 (53%), Gaps = 16/393 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +  A + + +          EIT+EANP ++E + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLKFEDGCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+   + L+ LGR H+ + A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTEHLQKLGRIHSVNNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKMAVEHGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSAHNLNYWEFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERN 361
           +L  V      + + E   +E+   EF+M  LRL +G+  + +E   G +LD   E   +
Sbjct: 296 YLAKVPAEHLQMKKIE---AEELPFEFMMNALRLNDGVKAELYEQRTGLSLDHLNEVLTS 352

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ +  +     SRL CT++G   L+SV+    
Sbjct: 353 LRARKLLVE-DHSRLACTEQGHIFLNSVLEEFL 384


>gi|326201856|ref|ZP_08191726.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           papyrosolvens DSM 2782]
 gi|325987651|gb|EGD48477.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           papyrosolvens DSM 2782]
          Length = 380

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 124/383 (32%), Positives = 214/383 (55%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           SN+ G+Y+H PFC  KC YCDFNS+  +     +N+ ++   E++  ++      I +IF
Sbjct: 4   SNNSGLYIHVPFCSSKCNYCDFNSYAGKIN-FADNYFKAMKKEVELYKEYMKDYLIHTIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++  + I  IL+     + +S N EI+IE+NP ++ +   + Y+KAG+NRIS+
Sbjct: 63  IGGGTPSVVSERYIFEILEKCKTCFNISDNCEISIESNPGTLSIEKLKAYKKAGINRISM 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ ++  L++LGR H+  +  A++  AR+  F  ++ D+I+ +P QT+  W+  L   
Sbjct: 123 GLQAYQKNLLKYLGRCHSHEDFSASVKNARDAGFENINADIIFGIPGQTIENWKETLSYL 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  ++H+S Y L IE+GT F  M K+G LV   + +  ++Y+      S  GL  YEIS
Sbjct: 183 ISRGINHISAYSLKIEEGTKFGTMEKEGSLVQVEDELDREMYHYAVDYLSEQGLKQYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YW+  DY+G+G GAHS +K       +SI    E ++  ++     
Sbjct: 243 NFAKAGYECKHNLTYWKCVDYLGLGAGAHSCLKDVRFSNEVSI----EGYIDYLKHGDKP 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERV 371
           V E   L    +  E++ +GLRL +G++ +++ +   ++L  +       L+++G IE +
Sbjct: 299 VYENIPLELTDKMSEYMFLGLRLTKGVTGREFFLRFNQDLFSKYKASLEKLEKKGLIE-I 357

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               ++ T  G  + + V     
Sbjct: 358 SGDCVKLTSLGFDLANQVFVEFV 380


>gi|147677209|ref|YP_001211424.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Pelotomaculum thermopropionicum SI]
 gi|146273306|dbj|BAF59055.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Pelotomaculum thermopropionicum SI]
          Length = 378

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 199/383 (51%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIF 75
           ++G+YVH PFCVKKC YC F S  R  +     ++ + L E++          + +SS+F
Sbjct: 2   AIGLYVHVPFCVKKCLYCGFVSF-RLDREAAGLYLNALLREIELYGAALCGSEKEVSSLF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  IL  +  ++ +    E+T+EANP +V +      R+AGVNR+SL
Sbjct: 61  IGGGTPTCLPGDGLIKILQALKVHFRLLPECEVTVEANPGTVTLGGLSVLREAGVNRLSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +++ L+ LGR H + EA  A+ LAR   F  ++ D I+ +P QT  +W   L++A
Sbjct: 121 GVQSFQDRLLKVLGRAHGSGEAEKAVRLARQAGFANLNLDFIFGIPGQTAAEWLETLEKA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A +H+++Y L +E+GT   +    G L    E + + +Y         HG   YEIS
Sbjct: 181 VELAPEHIAVYGLQLEEGTPLERAVAGGGLEPCPEELELFMYRTAVEYLKKHGYIHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E LHNL YW    Y+G+GP AHS  +        S+E+    + +++ +    
Sbjct: 241 NFARPGRECLHNLGYWLNRPYLGLGPAAHSCFRGERFANEPSLER----YCRLLSQGVFP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERV 371
           V E+  LS  ++  E + +GLRL  G+ ++ +    GR  +      + R    G + ++
Sbjct: 297 VQERHALSLAEEMAETMFLGLRLIRGVDLEGFRSRFGRRAEEVYRNEIARLTGAGLV-KL 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               L  T +G+ + + V +   
Sbjct: 356 DGRFLALTGKGLPVANIVFSEFV 378


>gi|254429937|ref|ZP_05043644.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alcanivorax sp. DG881]
 gi|196196106|gb|EDX91065.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alcanivorax sp. DG881]
          Length = 383

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 138/378 (36%), Positives = 210/378 (55%), Gaps = 14/378 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+H P+CV+KCPYCDFNSH  R ++ +  ++Q+ LT+++    L G R + ++F
Sbjct: 5   NPPLSLYIHTPWCVRKCPYCDFNSH-ERGEIPEAAYLQALLTDLEQDLPLIGDRPVETVF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+       +  GI +  T+ ++ EIT+EANP ++E   F+G+R AG+NR+S+
Sbjct: 64  IGGGTPSLMSADFYRQLFQGIRQRLTLQADAEITLEANPGTLETGRFEGFRDAGINRLSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS     L+ LGR H+AS AI A H AR   F   + D+++ALP Q+  Q   +LQ+A
Sbjct: 124 GVQSFNNAHLQALGRIHDASAAIDAAHQARAAGFDNFNLDIMHALPGQSHAQALDDLQQA 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    HLS Y+LTIE  T+FY+         P  +   D      ++ + HG   YEIS
Sbjct: 184 IALQPTHLSWYELTIEPNTVFYRAPPVQ----PDSDAMADTEQAGFALLAQHGYQRYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNG 312
             +  G    HNLNYW++GDY+GIG GAH ++   S  H       + PE +L       
Sbjct: 240 AFAQSGRRCRHNLNYWQFGDYLGIGAGAHGKITQASQGHVHRYQKTRKPEDYLADAA--- 296

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIER 370
           HA  + + ++ E +  E L+ GLRL +GI+ +      G  +         L++QG +  
Sbjct: 297 HARRQHQPIAREDRLFEALLNGLRLVDGITWQTLAQATGEPVSQWQNALTPLEQQGLLAI 356

Query: 371 VQFSRLRCTQRGMTMLDS 388
               RL CT  G+  L+ 
Sbjct: 357 TD-QRLACTDNGLRHLNG 373


>gi|148827660|ref|YP_001292413.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittGG]
 gi|148718902|gb|ABR00030.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittGG]
          Length = 383

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGVQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|158313942|ref|YP_001506450.1| coproporphyrinogen III oxidase [Frankia sp. EAN1pec]
 gi|158109347|gb|ABW11544.1| putative oxygen-independent coproporphyrinogen III oxidase [Frankia
           sp. EAN1pec]
          Length = 409

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 128/398 (32%), Positives = 202/398 (50%), Gaps = 20/398 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWM 62
           +  +T  G+   GVYVH P+C  +C YCDFN++         + G  +F+ S  TE +  
Sbjct: 19  DAALTEVGTRPFGVYVHVPYCAARCGYCDFNTYTPAELGAGGQGGAASFVDSVATEARLA 78

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R + G R  ++S++F GGGTP+L+   ++A +L  +   + ++ + E+T EANP SV+  
Sbjct: 79  RSVLGERDLTVSTVFVGGGTPTLLPAADLAKVLRVLDDTFGLAGDAEVTTEANPESVDRE 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +  R +G  RIS G+QS     L  L R H        +  AR+   R +S DLIY  
Sbjct: 139 TLEQLRASGYTRISFGMQSARPHVLAALDRRHTPGRVPEVVGWARSAGFRQLSLDLIYGA 198

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++ + W   L   +  A DH+S Y LT+E+GT   +  + G+L+ P +++  D Y   
Sbjct: 199 PGESESDWAASLDTVIELAPDHVSAYALTVEEGTKLSRRVRRGELLEPDDDLLADRYLQA 258

Query: 240 QSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A GL  YE+SN +   +    HN+ YWR  D+ G+GPGAHS V      V     
Sbjct: 259 DEALAAAGLTNYEVSNWARDQSSWCRHNMGYWRGDDWWGLGPGAHSHVGG----VRWWNV 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +HP  +   V         +E L ++ +  E +M+G+RL EG+ V     L  + LD+  
Sbjct: 315 RHPTEYATRVGAGHSPAAGREVLDAQARRVERVMLGVRLVEGLGVD---ALGEQALDVAA 371

Query: 359 ERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E  L   G I  + +   R+  T+RG  + D+V+  L 
Sbjct: 372 E--LAADGLIVADVLAQGRVALTRRGRLLTDTVVRALL 407


>gi|145636269|ref|ZP_01791938.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittHH]
 gi|145270434|gb|EDK10368.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittHH]
          Length = 383

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 129/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        + + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQQKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|46201193|ref|ZP_00055595.2| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Magnetospirillum magnetotacticum MS-1]
          Length = 375

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 166/380 (43%), Positives = 228/380 (60%), Gaps = 7/380 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S   G+Y+HWPFC+ KCPYCDFNSH     V    + ++ L E+      T  R+ +S+F
Sbjct: 3   SPGFGIYIHWPFCLSKCPYCDFNSHAG-LAVDHGRWRKALLAELDHFAAQTPDRTPTSVF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+EP+    ++  +   W    ++E+T+EANP+SVE + F+ +R AGVNR+SL
Sbjct: 62  FGGGTPSLMEPETAGALIAMVKSRWASGPDLEVTLEANPTSVEADRFRAFRDAGVNRLSL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L+ +SL FLGR H+  EA+AA+ LA+  FPR+SFDLIY+ P QT  QW  EL RAL
Sbjct: 122 GIQALDPESLAFLGRRHSVDEALAALSLAQATFPRVSFDLIYSRPGQTQAQWRAELARAL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A +HLSLYQLTIE GT F  +H  G   LP E+ A   + LTQ +    GL AYEISN
Sbjct: 182 DLAGEHLSLYQLTIEDGTAFAPLHARGGFALPDEDEATAQFELTQEMCERAGLPAYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+   A+  HNL YW+ G ++GIGPGAH R        A++  + P  WL  V   GHA 
Sbjct: 242 HARANAQCRHNLTYWQGGAWLGIGPGAHGRFGGE----ALAQTRSPGPWLAQVESQGHAT 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             +  L   ++  E ++MGLRLR G+       +  + LD E    +   GF+ +     
Sbjct: 298 ETRYVLDPAERLSELVLMGLRLRNGLGPALLAEV-RQVLDAEGLARMIADGFLVQDARG- 355

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T RG  +L++V+  L  
Sbjct: 356 LRTTDRGRLVLNAVLGQLLA 375


>gi|213692358|ref|YP_002322944.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523819|gb|ACJ52566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320458497|dbj|BAJ69118.1| putative coproporphyrinogen III oxidase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 392

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 191/387 (49%), Gaps = 17/387 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSIS----- 72
           +Y+H PFC+++C YCDFN++          + ++ Q  + EM  +RQ      I      
Sbjct: 5   IYIHVPFCLRRCGYCDFNTYTATDLGAGASRGHYAQMVIREMALIRQWQCDHGIEEPAAS 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++   ++  ++D I   W ++ + EIT EANP +V+          G  R
Sbjct: 65  TVFFGGGTPTVLAAADLVAVVDAIRAIWGLTPDAEITTEANPDTVDEAYIAELADGGFTR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L  L R H  S   A +  A     R S DLIY  P +++  W   ++
Sbjct: 125 ISFGMQSAVPHVLATLDRTHTPSNVAAGVDAATMAGLRSSVDLIYGAPGESLEDWRTSVE 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V H+S Y LT+E  T   +    G L  P ++     Y L   + +  GL  YE
Sbjct: 185 AALDLGVHHISAYALTVEPTTKMGRRIAAGTLPKPDDDDEAAKYELADELFTQAGLDWYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-----VGSHRVAISIEKHPESWLKM 307
           ISN +  G ES HNL YWR  D+ G+GPGAHS  +        + +      HP  W   
Sbjct: 245 ISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYRCHAMSSNGYGLRSWDIAHPRLWGVA 304

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           + ++     + E +++E+  +E +M+GLR+REG+ ++  +    R + ++    +  +G 
Sbjct: 305 INEHRVPWADSERITAEENLEELIMLGLRMREGLDLERID----RVIAVDRLTPMIEEGL 360

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  V   R+  T+RG  + D+VI    
Sbjct: 361 VTVVDGRRVVPTRRGRLINDTVIERFF 387


>gi|262280818|ref|ZP_06058601.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257718|gb|EEY76453.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 384

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 136/393 (34%), Positives = 211/393 (53%), Gaps = 16/393 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH           ++ ++++ + + +   +
Sbjct: 1   MAVLNPASIPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSSELEQTYLKALVADFETQLE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  Q    +   +          EIT+EANP +VE + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAQGYVWLFAELKSLLKFEDGCEITLEANPGTVEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQS +   L+ LGR H+A+ AI AI  A+   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQSFDTNHLQKLGRIHSANNAIEAIQQAKQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +LQ A+     H+S YQLTIE  T+F++       VLP + +  D+    ++  
Sbjct: 181 LEQALYDLQLAVESGATHISWYQLTIEPNTVFFR----TQPVLPQDEMLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-LPSTHNLNYWEFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           +L  V      + + E   +E+   EF+M  LRL +G+  + +E   G +L+   E   +
Sbjct: 296 YLAKVPAEHLQMKKIE---AEELPFEFMMNALRLNDGVKAELYEQRTGLSLESLNEVLTS 352

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ +  +     SRL CT++G   L+SV+    
Sbjct: 353 LRARKLLV-DDVSRLACTEQGHIFLNSVLEEFL 384


>gi|157964241|ref|YP_001499065.1| coproporphyrinogen III oxidase [Rickettsia massiliae MTU5]
 gi|157844017|gb|ABV84518.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia massiliae MTU5]
          Length = 388

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 158/385 (41%), Positives = 233/385 (60%), Gaps = 9/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSHV    +    +++S+ TE+++ + +   + I SIF
Sbjct: 8   ANDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHNQWLKSYETEIEYFKDIIQNKYIKSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 67  FGGGTPSLMNPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRVSI 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 127 GVQSLKEDDLKKLGRTHDCVQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT FYK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 187 QLATSHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR ++  S   AI +   P  WL  V KN   
Sbjct: 247 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPAKWLDSVTKN-VG 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q    I  
Sbjct: 306 IQTNTKLTHQEVIEEMLMMGLRLSKGINISTLEQKLNTKLENILDMNNLKHYQALDLIRL 365

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 366 DKN--IYLTDKGLMLHSYIVPRLII 388


>gi|260582271|ref|ZP_05850064.1| coproporphyrinogen III oxidase [Haemophilus influenzae NT127]
 gi|260094639|gb|EEW78534.1| coproporphyrinogen III oxidase [Haemophilus influenzae NT127]
          Length = 383

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 206/374 (55%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    ++ EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRSFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|88859169|ref|ZP_01133810.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas tunicata D2]
 gi|88819395|gb|EAR29209.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudoalteromonas tunicata D2]
          Length = 369

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 130/377 (34%), Positives = 206/377 (54%), Gaps = 14/377 (3%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           H P+CV+KCPYCDFNSH ++ ++ Q +++   L +++        R + SIF GGGTPSL
Sbjct: 2   HIPWCVQKCPYCDFNSHGQKGEIPQADYVAHLLADLRQDLHYAQGRKLHSIFIGGGTPSL 61

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +  Q+I+ +L GI      +  +EIT+EANP +VE   FQGY KAGVNRIS+GVQS++  
Sbjct: 62  MSEQSISELLHGIEALIPFNEQIEITLEANPGTVEAGRFQGYVKAGVNRISIGVQSMQND 121

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            L+ LGR H+A+EA+ A   A        + DL++ LP Q++     +L++ ++    H+
Sbjct: 122 KLKALGRIHDANEAVKAAEQAHLAGLNSFNLDLMHGLPGQSIDDALSDLKQIIALQPKHI 181

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           S YQLTIE  T F+        VLP +++  D+     +I  A G   YE+S +S  G +
Sbjct: 182 SWYQLTIEPNTQFHSKPP----VLPEDDILWDIQEQGHAILEAAGYEQYEVSGYSKAGYQ 237

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VAISIEKHPESWLKMVRKNGHAVVEKEF 320
             HNLNYWR+GDY+GIG GAH ++ + +    +     KHP+ +++   +    + ++  
Sbjct: 238 CQHNLNYWRFGDYLGIGCGAHGKITLPAQNKLIRTEKVKHPKGYME---ETQPYLYKQWQ 294

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRC 378
           +     + EF M  LRL E  +   +  L G  +            QG +++      + 
Sbjct: 295 VEQSDLSFEFFMNRLRLHESCAKTAFSELTGLPISRLEGAFDKAIEQGLLQQ-NAEVWQV 353

Query: 379 TQRGMTMLDSVIANLAV 395
           T +G   L+ ++  L V
Sbjct: 354 TAKGRRYLNDLL-ELFV 369


>gi|29653935|ref|NP_819627.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 493]
 gi|154707407|ref|YP_001424813.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii Dugway 5J108-111]
 gi|165923927|ref|ZP_02219759.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 334]
 gi|29541198|gb|AAO90141.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii RSA 493]
 gi|154356693|gb|ABS78155.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii Dugway 5J108-111]
 gi|165916619|gb|EDR35223.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 334]
          Length = 375

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 200/381 (52%), Gaps = 21/381 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        + + I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLFEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK        LP+++   ++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYKHPP----ALPTDDYIWEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++         + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDA---QKPFIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDIECERNLQRQGFIE 369
            ++ L+  +   EF+M  LRL++ I +  +    G +       L+   ERNL +     
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPLTLFTERTGLSPSVLVPWLETAKERNLLQ----- 352

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
                 L  T  G   L+ ++
Sbjct: 353 -CDNKYLTVTPLGHRFLNELL 372


>gi|311741355|ref|ZP_07715179.1| coproporphyrinogen dehydrogenase [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311303525|gb|EFQ79604.1| coproporphyrinogen dehydrogenase [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 379

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 178/385 (46%), Gaps = 16/385 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSI 71
           +   G+Y+H PFC  +C YCDFN++         +    ++ +   E++      G R  
Sbjct: 2   TEPFGLYIHVPFCATRCGYCDFNTYTPGELGSPRDLTGPYLDALDRELELAAARVG-RPA 60

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSL+  Q ++ IL+ +   + +    E+T E+NP S     F     AG  
Sbjct: 61  ETVFIGGGTPSLLGGQGLSRILNTVRSTFGLKPGAEVTTESNPESTSPEYFSQLADAGYT 120

Query: 132 RISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           RISLG+QS     L+ L R H       AA       F  ++ D+IY  P +T       
Sbjct: 121 RISLGMQSASPGVLQVLERAHTPGRAFAAAREARAAGFEHVNLDMIYGTPTETDDNVRET 180

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R L   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   A G   
Sbjct: 181 LDRVLETGVDHVSAYSLIVEDGTRMARKVNKGILPAPDEDVLARRYEMISSTLEAEGFEW 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN S  G E  HN  YW  G++ G GPGAHS +            KHP  ++  + +
Sbjct: 241 YEVSNWSKPGGECEHNRIYWVDGNWWGAGPGAHSHLGNERFFNV----KHPSRYIDALGR 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +   + E E L+   +  E +M+GLRLREGI     +  A              +G +ER
Sbjct: 297 DELPIKETETLTDADRHMEKIMLGLRLREGIPEAWLDAHA-----APALERFIGRGLLER 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+R T+ G  + D +I +L V
Sbjct: 352 AD-DRVRITKPGRLLADGIITDLLV 375


>gi|288555675|ref|YP_003427610.1| coproporphyrinogen III oxidase [Bacillus pseudofirmus OF4]
 gi|288546835|gb|ADC50718.1| coproporphyrinogen III oxidase [Bacillus pseudofirmus OF4]
          Length = 381

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 186/380 (48%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +   + +IQ+ L EM        P  + +I+ GGG
Sbjct: 4   AAYIHIPFCEHICHYCDFNKVFLKNQ-PVDEYIQALLHEMHMTINEAKPDQLKTIYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +   +     +    E T+E NP S E       ++ GVNR+S+GVQS
Sbjct: 63  TPTALTAAQLRTLFAEMHSILPMEQIEEFTVEVNPDSSEEEKLAVMKEFGVNRLSIGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L  +GR H++     A+  +R   F  +S DL++ LP Q++ Q+   +++A    
Sbjct: 123 FDQSLLDAIGRTHSSDSVHDAVKRSREAGFDNLSLDLMFGLPHQSVEQFIDTIEKAAELG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+HLS Y L IE+ T+F+   + G L LP E   V +Y   +  T AHG   YEISN + 
Sbjct: 183 VEHLSAYSLKIEEKTVFFNRQRKGKLSLPPEEDEVTMYEELRKRTKAHGFVQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GAH  V    H+    + K    +++ V +     + +
Sbjct: 243 PGRESKHNLVYWNNDEYYGFGAGAHGYVNGVRHQNIGPVPK----YIEAVNQKKLPYLNE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
             +S  +Q +E + MGLR   G+ + +      ++L+    +  ++L  +G +   +   
Sbjct: 299 HKVSRVEQIEEAMFMGLRKLNGVDLDELSKRYDKDLNKLYHDQIKDLSERGLLV-SEQGM 357

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L+ T  G+ + + V      
Sbjct: 358 LKLTNEGLLLANEVFEQFLA 377


>gi|34580828|ref|ZP_00142308.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia sibirica 246]
 gi|28262213|gb|EAA25717.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Rickettsia sibirica 246]
          Length = 400

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 156/385 (40%), Positives = 231/385 (60%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N L +Y+HWPFC+ KCPYCDFNSH+    +    + +S+ TE+++ + +   + I SIF
Sbjct: 19  ANDLSIYIHWPFCLSKCPYCDFNSHIAS-TIDHNQWFKSYETEIEYFKDIIQNKYIKSIF 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  I++ I+    + +  EIT+E NP+S E   F+ ++ AG+NRIS+
Sbjct: 78  FGGGTPSLMHPVIVEGIINKISNLAIIDNQTEITLETNPTSFETEKFKAFKAAGINRISI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IF R+SFDLIYA   QT+  W+ EL++A+
Sbjct: 138 GVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFLRVSFDLIYARSGQTLKDWQEELKQAM 197

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT  YK+ K+G+L+LP  + A ++Y  T     +     YEISN
Sbjct: 198 QLATSHISLYQLTIEKGTPCYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRYEISN 257

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           ++ +G E LHNL YW Y  Y+GIGPGAHSR ++  S   AI +   PE WL  V+     
Sbjct: 258 YAMIGYECLHNLTYWNYNSYLGIGPGAHSRIIESSSSVSAIMMWHKPEKWLDAVKTKNVG 317

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q    I  
Sbjct: 318 IQTNTKLTHQEIIEEMLMMGLRLSKGINISTLEQKLNTKLEHILDMNNLKHYQALDLIRL 377

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 378 DEN--IYLTDKGLMLYSYIVPRLII 400


>gi|319939258|ref|ZP_08013621.1| coproporphyrinogen III oxidase [Streptococcus anginosus 1_2_62CV]
 gi|319811654|gb|EFW07930.1| coproporphyrinogen III oxidase [Streptococcus anginosus 1_2_62CV]
          Length = 376

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + ++L  +    +    + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDAYLEHLIQEYRAYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ + P  +  +L  + K+  +SS  E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTSLSPTQLEFLLAELTKSLDLSSLEELTIEANPGDLDPDKIAVLKDSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I +L    F  +S DLIYALPKQTM      + +A
Sbjct: 118 GVQTFDDRMLKQIGRSHLEKDIYENIANLKLAGFDNISIDLIYALPKQTMDNVRENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++          G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIEELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V K G+A
Sbjct: 238 NFSKPGFESQHNLMYWDNAEYFGIGAGASGYVNGVRYKNHGPI----RHYLEAVEK-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V +E LS ++  +E + +GLR + G+S K +E   G + D +       L  QG +   
Sbjct: 293 RVNEEHLSKQEMMEEEMFLGLRKKSGVSKKRFEEKFGVSFDRQYGHVVTELIEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DKEIVRMTKKGLFLGDTVAEKFIL 375


>gi|168204725|ref|ZP_02630730.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens E str. JGS1987]
 gi|170663535|gb|EDT16218.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens E str. JGS1987]
          Length = 377

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 117/383 (30%), Positives = 208/383 (54%), Gaps = 11/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAKL-NMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+    E ++  + + G AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSV----EEYINSINEKGEAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQ 372
            E    S     +EF+ MGLR   GI   +++     N++      L +   +G + R  
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKNRFSMNINDVYGEILNKYIGEGLLIRGS 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  +++G+ + + ++A+  +
Sbjct: 356 -GRIFLSEKGIEISNIIMADFLL 377


>gi|327470135|gb|EGF15599.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK330]
          Length = 376

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 197/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L  +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLKKLTDKLDLSYLEELTIEANPGDLDREKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFDHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +++ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYMQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|261493806|ref|ZP_05990320.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261310509|gb|EEY11698.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 385

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 131/388 (33%), Positives = 204/388 (52%), Gaps = 21/388 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ +I+  L ++       R   G R + S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHLLADLSQDLTAYRVAIGDRKLYS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      N+EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLSEVEKRIAFEPNIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+A+EA  AI  A+N         + DL++ LP Q++ Q  +
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNSAKSGLQSFNIDLMHGLPNQSVKQALV 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+  +S    HLS YQLTIE  T+FY         LP ++   D++     + +  G  
Sbjct: 187 DLETGISLNPPHLSWYQLTIEPNTMFY----YRKPTLPDDDELWDIFEQGHQLLTNAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQG 366
              G     ++ +  + +  EF M   RL E    +++E   G + +I          Q 
Sbjct: 301 ---GEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQEFEWFTGLDREIVRPTIDWALNQN 357

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +I     +  + TQ G   L+ ++ +  
Sbjct: 358 YISE-SSTHWQITQHGKLFLNELLEDFL 384


>gi|254822300|ref|ZP_05227301.1| coproporphyrinogen III oxidase [Mycobacterium intracellulare ATCC
           13950]
          Length = 390

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 119/388 (30%), Positives = 187/388 (48%), Gaps = 13/388 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG 67
           ++        G+YVH PFCV +C YCDFN++      G   + ++ +   E++       
Sbjct: 12  DVRVTAGQPFGIYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLGALRAELELAAARLQ 71

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              +S++F GGGTPSL+    +  +LD + +++ ++++ EIT EANP S   + F   R 
Sbjct: 72  APPVSTVFVGGGTPSLLGGARLVTLLDMVREHFPLAADAEITTEANPESAWPDLFDAIRA 131

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS+  + L  L R H  +  A AA       F  +S DLIY  P ++   
Sbjct: 132 AGYTRVSLGMQSVAPRVLGVLDRIHTPNRSADAAREALAAGFEHVSLDLIYGTPGESDDD 191

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +  A+   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  
Sbjct: 192 LLRSVDTAIETGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSEA 251

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G+  YE+SN S  G E  HNL YW  G + G GPGAH  V            KHP ++ +
Sbjct: 252 GMSWYEVSNWSRPGGECRHNLGYWDGGQWWGAGPGAHGYVGTTR----WWNVKHPNAYAE 307

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +      V   E L ++    E +++ +RLR+G+ V         + + E    +   G
Sbjct: 308 RLGAAALPVAGFERLDADTLHTEDVLLKVRLRQGLPVGLLN-----SEERERAAGVVADG 362

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +      RL  T RG  + D+V+  L 
Sbjct: 363 LLVTT-GDRLVLTDRGRLLADAVVRTLL 389


>gi|169797350|ref|YP_001715143.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii AYE]
 gi|213155835|ref|YP_002317880.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB0057]
 gi|215484790|ref|YP_002327025.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB307-0294]
 gi|301512878|ref|ZP_07238115.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB058]
 gi|301596056|ref|ZP_07241064.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB059]
 gi|169150277|emb|CAM88174.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii AYE]
 gi|213054995|gb|ACJ39897.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB0057]
 gi|213986328|gb|ACJ56627.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB307-0294]
          Length = 384

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 132/393 (33%), Positives = 212/393 (53%), Gaps = 16/393 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   RSI S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F G
Sbjct: 61  LAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+     H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKTAVEQGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           +L  V      + + E   +++   EF+M  LRL +G+  + +E+  G +L+   +   +
Sbjct: 296 YLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELYELRTGLSLNDLNDVLTS 352

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ +  +      RL CT++G   L+SV+    
Sbjct: 353 LRSRKLLVE-DSGRLACTEQGHIFLNSVLEEFL 384


>gi|332975779|gb|EGK12660.1| coproporphyrinogen dehydrogenase [Desmospora sp. 8437]
          Length = 381

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 196/380 (51%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  KC YCDF ++V   +   ++++ +   EM    +   P  I +IF GGG
Sbjct: 5   SVYIHIPFCAHKCHYCDFTAYVVGGQ-PVDDYLDALEREMARTVEEIPPGKIETIFIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+++ P+ +  +L  + + + V S  +E T+EANP + E       ++ GVNR+S G Q
Sbjct: 64  TPTVLAPRQMERLLKDVRRYFPVWSDRLEFTVEANPGTTEPEKLAVLKEGGVNRLSFGAQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +     L  +GR+H   E   ++  AR      +S DL++ LP+Q++T  E  L R L+ 
Sbjct: 124 TFRPDLLAEIGRDHGVDEIAGSVETAREAGIDNVSLDLMFGLPRQSVTDMEEALVRGLAL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DH S+Y L +E+GT+F+     G L LPSE+  +++Y LT+      G   YE+SN S
Sbjct: 184 GPDHFSVYSLKVEEGTVFHHKMLQGKLPLPSEDDELEMYLLTRRRLEEAGYLQYEVSNFS 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW    Y G+G GAH   +   H     + ++       + ++   +  
Sbjct: 244 RPGRESRHNSTYWLNEPYYGLGAGAHGYAQGVRHENVRGVGEYI-----RLSRSRRPIAA 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFS 374
              +S+ +  +   ++GLRLR+G+S + +  L G+  +        +LQ++  I R +  
Sbjct: 299 THRVSAAEAMENHFILGLRLRDGVSQRGFAQLYGKPPETVFGSVLEDLQKRRLIRR-EGD 357

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R + T++G+   + V A   
Sbjct: 358 RYQLTEQGLLFGNDVFAAFI 377


>gi|261337371|ref|ZP_05965255.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium gallicum DSM 20093]
 gi|270277751|gb|EFA23605.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium gallicum DSM 20093]
          Length = 388

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 125/385 (32%), Positives = 195/385 (50%), Gaps = 15/385 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VYVH PFC+++C YCDFN++  R       +E +    + EM+ +RQ           +S
Sbjct: 4   VYVHVPFCLRRCGYCDFNTYTARDLGNGASREGYAHQAIQEMRLVRQWQLDHGLDEGPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F GGGTP+++ P N+A ++  I   W + +  EIT EANP +V+ +  Q    AG  R
Sbjct: 64  TVFLGGGTPTILTPSNLAAMVQAIDGIWGIEAGAEITTEANPDTVDADYIQALADAGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L  L R H  +   A I+ A     R S DLIY  P +++  W   ++
Sbjct: 124 ISFGMQSAVPHVLHTLDRTHTPANVEAGINAANRAGLRSSVDLIYGTPGESLDDWRTSVK 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++  V+H+S Y LT+E  T   +    G L  P ++     Y++  ++ +  G   YE
Sbjct: 184 TAIALGVNHISAYALTVEPTTTMGRRIAAGVLPKPDDDDEAAKYDIADTLLTQAGFDWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VAISIEKHPESWLKMVRKN 311
           +SN +  G ES HNL YWR  D+ GIGPGAHS         V      HP+ W + + + 
Sbjct: 244 VSNWAKPGYESRHNLGYWRNVDWAGIGPGAHSHYGDVQGSAVRAWDITHPKVWAQAINEG 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER- 370
                  E +S+ +QA+E LM+GLR+REG+ +   +      +     R    +G ++  
Sbjct: 304 RVPFAGSETISATEQAEEQLMLGLRIREGLDIAQADAR----IPQAAWRQFADEGLLDPR 359

Query: 371 -VQFSRLRCTQRGMTMLDSVIANLA 394
            +   R   T+RG  + D++I  L 
Sbjct: 360 ALNEGRAVPTRRGRLLNDAMIMQLM 384


>gi|303238640|ref|ZP_07325173.1| oxygen-independent coproporphyrinogen III oxidase [Acetivibrio
           cellulolyticus CD2]
 gi|302593759|gb|EFL63474.1| oxygen-independent coproporphyrinogen III oxidase [Acetivibrio
           cellulolyticus CD2]
          Length = 380

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 113/384 (29%), Positives = 194/384 (50%), Gaps = 8/384 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
               S+G+Y+H PFC  KC YCDFNS   R ++    +  +   E+    +     +I +
Sbjct: 2   DNKKSIGIYIHIPFCRAKCFYCDFNSFACRDEL-VPAYFNALKKEISLYAEKLKGYNIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPS+++ Q I  I+  + +   +    EI+IE NP ++ +   Q Y++ GVNR+
Sbjct: 61  VFIGGGTPSVVDAQYIYEIMSLLNQKLDIDKKAEISIETNPGTLNLEKLQIYKEIGVNRL 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+ +++ L+ LGR H A E      LAR   F  ++ DLI+ +P Q+   W   L+
Sbjct: 121 SIGLQAWQDRILKMLGRIHTAKEFEDNFKLARQVGFDNINVDLIFGIPDQSFEDWCETLK 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  +H+S Y L IE+GT+F    ++G+L    +++   +Y+ T+   +  G   YE
Sbjct: 181 SVTELGPEHMSCYSLKIEEGTIFGSRLENGELEPLDDDIDRKMYSYTKDYLAKKGYKHYE 240

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G E  HNL YW   +YIGIG G+HS  +         I    ES++  +    
Sbjct: 241 ISNFAKPGYECRHNLVYWDVEEYIGIGAGSHSFFESTRFNNVYDI----ESYISSILGEK 296

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIER 370
                 E ++ ++   EF+++GLRL +G+ V+D++   G  +     + + R     +  
Sbjct: 297 IPSENAESINKKESMAEFMILGLRLIDGVRVEDFKSRFGVEIYSVYGKEINRLVDWKLII 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           V+   +  +  G+   + V     
Sbjct: 357 VKEGFISLSSIGLDYANQVFMEFI 380


>gi|153209538|ref|ZP_01947434.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii 'MSU Goat Q177']
 gi|212218785|ref|YP_002305572.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuK_Q154]
 gi|120575331|gb|EAX31955.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii 'MSU Goat Q177']
 gi|212013047|gb|ACJ20427.1| oxygen-independent coproporphyrinogen-III oxidase [Coxiella
           burnetii CbuK_Q154]
          Length = 375

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 202/381 (53%), Gaps = 21/381 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        +++ I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLIEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK        LP+++  +++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYKHPP----ALPTDDYILEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++         + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDA---QKPFIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDIECERNLQRQGFIE 369
            ++ L+  +   EF+M  LRL++ I +  +    G +       L+   ERNL +     
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPLTLFTERTGLSPSVLVPWLETAKERNLLQ----- 352

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
                 L  T  G   L+ ++
Sbjct: 353 -CDNKYLTVTPLGHRFLNELL 372


>gi|288942741|ref|YP_003444981.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
 gi|288898113|gb|ADC63949.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
          Length = 395

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 129/394 (32%), Positives = 191/394 (48%), Gaps = 19/394 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQW-MRQLTGPRSIS 72
               L +YVH P+CV+KCPYCDFNSH   R     + +++    ++   +R+    R I 
Sbjct: 7   SPPPLALYVHLPWCVRKCPYCDFNSHPGGRESRPFDAYVERLQLDLDAELREPAARRPIG 66

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIF GGGTPSL     I  +LDGI     +  + EIT+EANP +++  +F  YR+AG+NR
Sbjct: 67  SIFIGGGTPSLFPGPAIRRLLDGIRARVELIPDAEITLEANPGTIDAAHFAAYREAGINR 126

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQSL  + L  LGR H   EA  A+ +AR   F  ++ DL++ LP QT+     +L
Sbjct: 127 LSIGVQSLSTEQLERLGRIHTPEEAREAVRIARALGFDNLNLDLMFGLPGQTLDGARADL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              ++   +H+S YQLT+E GT F          LP  ++  D+     +   + G   Y
Sbjct: 187 DALIALEPEHVSYYQLTVEPGTAFGARPP----ELPDGDLVADMGAEGAARLESAGYGRY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-------RVAISIEK--HPE 302
           E+S ++  G +  HNLNYWR+GDY+GIG GAH ++                  EK  HP 
Sbjct: 243 EVSAYARRGRQCRHNLNYWRFGDYLGIGAGAHGKLSAQRAPTESTMPWRVWRTEKPVHPN 302

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-N 361
            +L         +  +  LS      EF++  LRL +G     +    G        R  
Sbjct: 303 LYLNA--DPSQPLGVRRDLSEADLILEFVLNALRLTDGFEPDLFTATTGLPWSRIAARLQ 360

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                 +  +   R+  T  G   LD ++A    
Sbjct: 361 AAADDRLLSLDPDRVAPTPLGRDFLDDLVARFLA 394


>gi|312135351|ref|YP_004002689.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor owensensis OL]
 gi|311775402|gb|ADQ04889.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor owensensis OL]
          Length = 375

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 204/381 (53%), Gaps = 10/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC KKC YCDF S+          +  +   E+ + ++      I +++ 
Sbjct: 2   RNIGLYIHVPFCRKKCYYCDFVSYENVDDDMVFAYFSALENELIFYKE-NYEIEIDTVYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + I  +L+ I  N+ V +  EI+IEANP S+     + YRKAG+NR+S+G
Sbjct: 61  GGGTPSFVPAKYILKLLEFIYSNFNVKNTCEISIEANPESITKEKLKSYRKAGINRLSVG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  LR +GR H+++ A+  + +    F   S D+I  LP QT   +   L   L 
Sbjct: 121 IQSLNDTELRVIGRVHDSAVALKILSVVPLYFENFSIDVITGLPYQTFESFMQTLNTLLE 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  HLS+Y L IE+GT  +  +++       E+    ++   +   S  GL+ YEISN 
Sbjct: 181 FSPPHLSIYSLKIEEGTPLFNRYEEYKHSFADEDEERRMFWWARDRLSEVGLYHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW   +YIG+G  AHS      +    +I +    ++K +++NG AV 
Sbjct: 241 AKKGFECKHNLKYWNCDEYIGVGCAAHSFFDGYRYYNTSNINE----YVKKIKENGLAVE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
            KEF+S+E+   EF+++GLR  EG S+ ++    G   +         L++ G IE    
Sbjct: 297 GKEFISNEESEKEFIILGLRKIEGFSLDEFRERFGIEFERKYKYRIEKLKKYGLIEI--D 354

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R++ T+RG+ + + V     
Sbjct: 355 NRIKLTKRGIDLANLVWQEFI 375


>gi|145640435|ref|ZP_01796019.1| coproporphyrinogen III oxidase [Haemophilus influenzae R3021]
 gi|145275021|gb|EDK14883.1| coproporphyrinogen III oxidase [Haemophilus influenzae 22.4-21]
          Length = 383

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 129/374 (34%), Positives = 204/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+ DY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFRDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|117927989|ref|YP_872540.1| coproporphyrinogen III oxidase, anaerobic [Acidothermus
           cellulolyticus 11B]
 gi|117648452|gb|ABK52554.1| coproporphyrinogen III oxidase, anaerobic [Acidothermus
           cellulolyticus 11B]
          Length = 400

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 124/383 (32%), Positives = 184/383 (48%), Gaps = 16/383 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQ-LTGPRSISSI 74
            G+YVH P+C  +C YCDFN++      G  +   F+   + E++  R+ L+G   + ++
Sbjct: 26  FGIYVHVPYCAARCGYCDFNTYTAAELGGHASRLTFVHDAIAELRMARRFLSGDAVVQTV 85

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTP+L+   ++  IL  I   + +++  E+T+EANP SV+          G  RIS
Sbjct: 86  FFGGGTPTLLPAAHLIEILRVIDGEFGLAAGAEVTVEANPESVDAEMLARLAAGGFTRIS 145

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+QS   + L  L R H        +  A    F  ++ DLIY  P ++   W   L+ 
Sbjct: 146 FGMQSAVPRILALLDRRHTPGTPELRVAQAFAAGFQHVNLDLIYGTPTESDADWRRSLEA 205

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++   DH+S Y LT+E GT   +    GDL  P ++VA D Y       SA G   YEI
Sbjct: 206 AVAAGPDHISAYALTVEPGTALARRIARGDLPAPDDDVAADRYRYADEFLSAMGYSWYEI 265

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  GAE  HNL YWR G + G+GPGAHS +            KHP ++ + +     
Sbjct: 266 SNWARPGAECRHNLGYWRDGVWWGVGPGAHSFIAG----RRWWNVKHPAAYAERLAAGVL 321

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI--ERV 371
            V   E LS   +  E +M+ LRL EG+         G              G +  +R+
Sbjct: 322 PVAGVEVLSDADRHVEDVMLRLRLAEGLPAAALRE--GEYAAAVRAAA---DGLLDADRL 376

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              R   T RG  + D+VI ++ 
Sbjct: 377 AAGRCVLTLRGRLLADTVIRDIL 399


>gi|146319095|ref|YP_001198807.1| coproporphyrinogen III oxidase [Streptococcus suis 05ZYH33]
 gi|146321297|ref|YP_001201008.1| coproporphyrinogen III oxidase [Streptococcus suis 98HAH33]
 gi|253752147|ref|YP_003025288.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis SC84]
 gi|253753972|ref|YP_003027113.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis P1/7]
 gi|253755907|ref|YP_003029047.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           suis BM407]
 gi|145689901|gb|ABP90407.1| coproporphyrinogen III oxidase [Streptococcus suis 05ZYH33]
 gi|145692103|gb|ABP92608.1| coproporphyrinogen III oxidase [Streptococcus suis 98HAH33]
 gi|251816436|emb|CAZ52069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus suis SC84]
 gi|251818371|emb|CAZ56197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus suis BM407]
 gi|251820218|emb|CAR46634.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus suis P1/7]
 gi|292558732|gb|ADE31733.1| coproporphyrinogen III oxidase [Streptococcus suis GZ1]
 gi|319758530|gb|ADV70472.1| coproporphyrinogen III oxidase [Streptococcus suis JS14]
          Length = 375

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 118/384 (30%), Positives = 208/384 (54%), Gaps = 14/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  Y+H PFC + C YCDF+    + +   ++++ + + E+++        ++ ++
Sbjct: 2   KKRPTSAYIHIPFCTQICYYCDFSKVFIKNQ-PVDDYLVALMEEVKFY----DLPALKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +  + +  +L  +     +S   E TIEANP  +  +     +K+  NR+S
Sbjct: 57  YIGGGTPSALSAEQLDYLLTNLEDLLDLSQLEEFTIEANPGDLTADKIAVLKKSKCNRVS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ +++ L+ +GR+HN ++    I   +   F  +S DLIYALP QTM Q    + +
Sbjct: 117 LGVQTFDDRMLKKIGRSHNQAQIYETIAALKEAGFHNISIDLIYALPGQTMEQVVDNVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + H+SLY L +E  T+F    + G+L LP+E+V  D+++        +G   YEI
Sbjct: 177 ALELDIPHMSLYSLILENHTVFMNRQRRGNLHLPNEDVESDMFDYILQELEKNGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK +R+ GH
Sbjct: 237 SNFTKPGFESHHNLMYWDNSEYYGLGAGASGYIDGMRYRNRAPI----QHYLKSIREKGH 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           + + +EFLS  +Q +E + +GLR + G+S++ +E   G + +    +  R+L+ +G ++ 
Sbjct: 293 SRLHEEFLSKTEQMEEEMFLGLRKKTGVSIERFEKKFGISFEDRYGQVVRDLKNEGLLQE 352

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +   LR T++G+ + D+V     
Sbjct: 353 -EDCWLRMTKKGLFLGDTVAERFI 375


>gi|110801024|ref|YP_696716.1| coproporphyrinogen III oxidase [Clostridium perfringens ATCC 13124]
 gi|110675671|gb|ABG84658.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens ATCC 13124]
          Length = 377

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 207/383 (54%), Gaps = 11/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIINLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  IAK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLESNELECLLKEIAKL-NMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  A S +     +   S+    E ++  + + G AV
Sbjct: 240 YAKEGKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSV----EEYINSINEKGEAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E    S     +EF+ MGLR   GI   +++     N++    E       +G + R  
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKKRFSMNINDVYGEILNKYIDEGLLIR-D 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  +++G+ + + ++A+  +
Sbjct: 355 SGRIFLSEKGIEISNIIMADFLL 377


>gi|324993002|gb|EGC24922.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK405]
 gi|327462298|gb|EGF08625.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1]
 gi|327474171|gb|EGF19581.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK408]
          Length = 376

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 200/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEIS
Sbjct: 178 IALGIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEDQYGAVVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|16272411|ref|NP_438624.1| coproporphyrinogen III oxidase [Haemophilus influenzae Rd KW20]
 gi|260580474|ref|ZP_05848302.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus influenzae RdAW]
 gi|1170234|sp|P43899|Y463_HAEIN RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein HI_0463
 gi|1573441|gb|AAC22122.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Haemophilus influenzae Rd KW20]
 gi|260092816|gb|EEW76751.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus influenzae RdAW]
          Length = 383

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|332360737|gb|EGJ38545.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK355]
          Length = 376

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIKEYHSYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDEEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S  + H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEIS
Sbjct: 178 ISLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   GHA
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVYGVRYKNHGPI----RHYLQAVEA-GHA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGVSFEDQYGAVVSELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|118579732|ref|YP_900982.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pelobacter propionicus DSM 2379]
 gi|118502442|gb|ABK98924.1| coproporphyrinogen III oxidase, anaerobic [Pelobacter propionicus
           DSM 2379]
          Length = 381

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 129/378 (34%), Positives = 206/378 (54%), Gaps = 6/378 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGG 79
           +Y+H PFC+ KCPYC F S        +E +++    EM+     +   R + S++FGGG
Sbjct: 5   LYIHIPFCLHKCPYCAFISQEGS-PARREAYVELLQAEMRLAHAGIPSGRPLESVYFGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+EP  I  IL      +++  + EIT+EANP +++     G+R +GVNR+SLGVQS
Sbjct: 64  TPSLLEPDQIGRILSLADTLFSLLPHAEITLEANPGTIDRAKLAGFRHSGVNRLSLGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L+++ L  LGR H+A++A  A+  AR   F  +  DLI+ALP QTM  W  +L+RAL  A
Sbjct: 124 LDDRMLASLGRIHSAAQAEQAVKAARATGFANIGIDLIHALPGQTMEMWRHDLERALDLA 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS+Y LTIE+GT F + +   D  LP E+++ D++     +  A G   YEI+N++ 
Sbjct: 184 PEHLSVYGLTIEEGTPFAQRYTH-DRDLPDEDLSADMFLAADDLLGAAGYEHYEIANYAL 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YWR   Y+G+G GAHS ++   H +  +     + +   + +      E 
Sbjct: 243 PGFRSRHNSGYWRRDGYLGLGAGAHSFLRGTGHGLRFANSSDVDEYAAAITRGQLPRQEM 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER--VQFSRL 376
             +S +    EF+ +GLR+ +G++  D+    G  +     + L+    +    +    +
Sbjct: 303 TEISDDDALAEFMFLGLRMLDGVTFSDFRREFGMEMKERFGKELEELTGLGLLAMDDRGV 362

Query: 377 RCTQRGMTMLDSVIANLA 394
             T+RGM + + V     
Sbjct: 363 HLTRRGMLLSNQVFTRFL 380


>gi|22537053|ref|NP_687904.1| coproporphyrinogen III oxidase [Streptococcus agalactiae 2603V/R]
 gi|76788033|ref|YP_329635.1| coproporphyrinogen III oxidase [Streptococcus agalactiae A909]
 gi|77405734|ref|ZP_00782820.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae H36B]
 gi|77410991|ref|ZP_00787346.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae CJB111]
 gi|22533911|gb|AAM99776.1|AE014232_14 oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae 2603V/R]
 gi|76563090|gb|ABA45674.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae A909]
 gi|77162915|gb|EAO73871.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae CJB111]
 gi|77175656|gb|EAO78439.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae H36B]
          Length = 376

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + ++Q+ + E +          + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIREFRSY----DITELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I    +  +L  ++++  +++  E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +A
Sbjct: 118 GVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  + HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEIS
Sbjct: 178 LSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++  
Sbjct: 293 RLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKE- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               ++ T++G+ + D+V     V
Sbjct: 352 NNGFIQMTKKGLFLGDTVAEKFIV 375


>gi|121534797|ref|ZP_01666617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosinus carboxydivorans Nor1]
 gi|121306592|gb|EAX47514.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosinus carboxydivorans Nor1]
          Length = 380

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 123/380 (32%), Positives = 192/380 (50%), Gaps = 10/380 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFC +KC YCDF SH     + Q+ +I +   E+    +      + +++ GG
Sbjct: 3   LGLYIHIPFCRQKCLYCDFPSHDNLAHLYQD-YIDALCREIAEQGRRFAGWVVDTVYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++  + +  +   +A  +++   VEIT+EANP ++++   +  R  GVNR+S GVQ
Sbjct: 62  GTPTVLPSELLGRVFASLAAAFSLEPAVEITVEANPGTIDLPLLKALRAWGVNRLSFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +     L  LGR H A + I A+ LAR   F  ++ DL+Y LP+Q        L RA   
Sbjct: 122 TFVPHLLPLLGRVHTAEQGIEAVELARAAGFDNINLDLMYGLPEQRQADVADSLSRATEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS+Y L +E+GT F   H  G L LP E     +Y+L  +     G   YEISN+ 
Sbjct: 182 GVPHLSVYGLKVEEGTPFAVSHAAGKLALPDETEEEAMYDLVTAFLRQAGYRRYEISNYC 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YW Y  ++G+G  A+S V          + +    +++  R+   AV +
Sbjct: 242 LSGYECRHNLKYWHYQPFLGLGAAAYSFVDGVRWANTPQVTE----YIQAQRQGALAVHD 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFS 374
           +E L  + Q  EF+ + LR   G+    ++   G +           L ++G +ER   +
Sbjct: 298 REVLDRQTQITEFIFLALRTAAGLDSGIFQERFGISFWDAYRATIDTLSQRGLVERC-GN 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T  GM   + V A+  
Sbjct: 357 RLRLTDLGMKFGNIVFASFL 376


>gi|113460270|ref|YP_718328.1| coproporphyrinogen III oxidase [Haemophilus somnus 129PT]
 gi|112822313|gb|ABI24402.1| coproporphyrinogen III oxidase, anaerobic [Haemophilus somnus
           129PT]
          Length = 392

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 211/386 (54%), Gaps = 20/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  ++   LT+++            R + S
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHAQKGSIPETEYVTHLLTDLKQDLVRYHASIANRKLHS 75

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   Q+I  +L+ I +      N+EIT+E+NP + E + F GY +AGVNRI
Sbjct: 76  IFIGGGTPSLFSVQSIDYLLNQIKQLIPFEDNIEITLESNPVTAESDRFVGYAQAGVNRI 135

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS   + L+ LGR HNA EA +A+  A++      + DL++ LP Q++ Q   +LQ
Sbjct: 136 SIGIQSFNNEKLQRLGRAHNAVEAKSAVRFAQHSGLNSFNLDLMHGLPNQSLVQALDDLQ 195

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T+F          LP E+   D++     + S  G   YE
Sbjct: 196 QAIALKPPHLSWYQLTIEPNTMFAYRPP----KLPDEDELWDIFEQGHQLLSKAGYQQYE 251

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++ +  +  HNLNYWR+GDY+ IG GAH ++     ++   S  KHP+ +++     
Sbjct: 252 TSAYAKVDFQCQHNLNYWRFGDYLAIGCGAHGKLSFADGQILRFSKTKHPKGYMR----- 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFI 368
           G  + E++ +   ++  EF M   RL E +  + +E+L G     ++ + +  L++    
Sbjct: 307 GEYLYEEKNIPFSERPFEFFMNRFRLLEPMEKQQFELLTGLAQSAVEKQIDWALEKNYLS 366

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E       + T++G   L+ ++    
Sbjct: 367 ET--NRTWQITEQGKLFLNELLTEFL 390


>gi|255522665|ref|ZP_05389902.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-175]
          Length = 363

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 188/369 (50%), Gaps = 10/369 (2%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
             C YCDFN      +   + ++   + EM+          + ++F GGGTP+ +    I
Sbjct: 1   HICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIAPVDTVFVGGGTPTTLNEAQI 59

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           A +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS   + L+ +G
Sbjct: 60  ARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQSFNNELLKKIG 119

Query: 150 RNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   +   ++  + +  F  +S DLI++LP QT   ++  L++AL   + H S Y L 
Sbjct: 120 RIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQDTLKQALDLDLPHYSAYSLI 179

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T+FY + + G L LP ++   ++Y+L  +    HG   YEISN +  G +S HN+ 
Sbjct: 180 IEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNIT 239

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD 328
           YW    Y G G GAH  V    +     I+K    +++ ++KN     +++ L+ +++ +
Sbjct: 240 YWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQKNILPTFQQKELTLKEKME 295

Query: 329 EFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTM 385
           E + +GLR  +G+  K ++   G++LD      +Q+   +G++E  + + +  T+ G  +
Sbjct: 296 EEMFLGLRKVDGVDKKHFKQKFGQDLDATFANAIQKTTAKGWLENNEEN-VALTRSGRFL 354

Query: 386 LDSVIANLA 394
            ++V     
Sbjct: 355 GNNVFQEFL 363


>gi|229846549|ref|ZP_04466657.1| coproporphyrinogen III oxidase [Haemophilus influenzae 7P49H1]
 gi|229810642|gb|EEP46360.1| coproporphyrinogen III oxidase [Haemophilus influenzae 7P49H1]
          Length = 383

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|312866636|ref|ZP_07726850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus parasanguinis F0405]
 gi|311097717|gb|EFQ55947.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus parasanguinis F0405]
          Length = 376

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   + ++   + E +         ++ +++
Sbjct: 3   TKPTSAYVHIPFCTQICFYCDFSKVFIKNQ-PVDAYLDHLIQEFRRE----EITNLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L  + K+  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALTADQLAYLLKELTKSLDLSQMEELTIEANPGDLDPDKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNRLLKKIGRSHQEQDIYDNIDRLKLAGFDNISIDLIYALPTQTMEQVQENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  + H+SLY L +E  T+F    + G L LP E +  +++          G   YEIS
Sbjct: 178 LALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIQELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y G+G GA   V    ++    I      +++ V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGLGAGASGYVNGVRYKNHGPI----RHYMQAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E LS  +  +E + +GLR + G+S + +E   G N D +       L +QG +   
Sbjct: 293 RVQEEHLSQTEMMEEEMFLGLRKKTGVSKRRFEEKFGVNFDQQYGPVVEELTQQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DKDIVRMTKKGLFLGDTVAEKFIL 375


>gi|86739970|ref|YP_480370.1| coproporphyrinogen III oxidase [Frankia sp. CcI3]
 gi|86566832|gb|ABD10641.1| coproporphyrinogen III oxidase, anaerobic [Frankia sp. CcI3]
          Length = 411

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 128/391 (32%), Positives = 195/391 (49%), Gaps = 22/391 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRY-------KVGQENFIQSFLTEMQWMRQLTGPR 69
              GVYVH P+C  +C YCDFN++            VG   F+     E++  R + G +
Sbjct: 28  RPFGVYVHVPYCAARCGYCDFNTYTAADLGGALVSSVGLTTFVDIATGEVRLARTVLGEQ 87

Query: 70  S--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              +S++F GGGTP+L+   ++  +L  +   + ++S+ EIT EANP SV+    +  R 
Sbjct: 88  ELVVSTVFVGGGTPTLLTADDLGRLLRILDDGFGLASDAEITTEANPESVDPAQLEQLRA 147

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  RIS G+QS     L  L R H        +  AR   F ++S DLIY  P ++   
Sbjct: 148 AGYTRISFGMQSSRPHVLAALDRRHTPGRVPEVMRWARKAGFDQVSLDLIYGAPGESEAD 207

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  A+    DH+S Y LT+E+GT   +  + G+L+ P +++  D Y        A 
Sbjct: 208 WAASLDAAIQLGPDHVSAYALTVEEGTKLSRRVRRGELLEPDDDLLADRYLQADDALCAA 267

Query: 247 GLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           GL +YE+SN S        HNL YWR   + GIGPGAHS V      V     +HP  + 
Sbjct: 268 GLTSYEVSNWSRGTDTRCRHNLGYWRGDHWWGIGPGAHSHVGG----VRWWNVRHPAEYA 323

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             +         +E L ++ +  E +M+G+RL EG++V + +   GR    E    L + 
Sbjct: 324 ARLGAGRSPAAAREELDAQARRVERVMLGVRLAEGLAVGELDG-PGR----EATAGLAKS 378

Query: 366 GFIER--VQFSRLRCTQRGMTMLDSVIANLA 394
           G +E   ++F R+R T+RG  + D+V+  L 
Sbjct: 379 GLVEPGALEFGRVRLTRRGRLLTDTVVRALL 409


>gi|296876332|ref|ZP_06900384.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           15912]
 gi|296432622|gb|EFH18417.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           15912]
          Length = 376

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   + ++   + E +         ++ +++
Sbjct: 3   TKPTSAYVHIPFCTQICFYCDFSKVFIKNQ-PVDAYLDHLIQEFRRE----EITNLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  +L  + K+  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALTADQLEYLLKELTKSLDLSQMEELTIEANPGDLDPDKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNRLLKKIGRSHQEQDIYDNIDRLKLAGFDNISIDLIYALPTQTMEQVQENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  + H+SLY L +E  T+F    + G L LP E +  +++          G   YEIS
Sbjct: 178 LALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIQELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y G+G GA   V    ++    I      +++ V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGLGAGASGYVNGVRYKNHGPI----RHYMQAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E LS  +  +E + +GLR + G+S K +E   G N D +       L +QG +   
Sbjct: 293 RVQEEHLSQTEMMEEEMFLGLRKKTGVSKKRFEEKFGVNFDQQYGPVVEELTQQGLLVPN 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R T++G+ + D+V     +
Sbjct: 353 K-DIVRMTKKGLFLGDTVAEKFIL 375


>gi|118444758|ref|YP_878569.1| coproporphyrinogen III oxidase [Clostridium novyi NT]
 gi|118135214|gb|ABK62258.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Clostridium novyi NT]
          Length = 375

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 200/380 (52%), Gaps = 15/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC +KC YCDF S+  R     E + ++   E+  ++     + IS+IF GGG
Sbjct: 6   SLYIHIPFCKQKCLYCDFTSYCGREDTMVE-YSKALSKEIDNVK----NKKISTIFIGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  Q    IL       + +SN+E T+E+NP + +    +  +  GVNR+S+G+QS
Sbjct: 61  TPTYLCLQG-WNILKQSIDKLSKTSNLEFTVESNPKTFDEEKLKFLKSIGVNRLSIGLQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ LGR H   E + + H+ARN  F  ++ DL++ +P QT+  W+  L       
Sbjct: 120 WQDKHLKSLGRIHTKDEFLKSYHMARNMGFKNINVDLMFGIPNQTLDDWKETLDEVTKLN 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L IE+GT FY  ++   + LPSE +  ++Y  T       G H YEISN + 
Sbjct: 180 PEHLSCYSLIIEEGTPFYDFYEKNKIELPSEELEREMYYYTLKFLEGKGYHQYEISNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E  HNL YW   +YIG G  AHS V    +R    IEK    +++ +++N   + EK
Sbjct: 240 KNYECRHNLVYWDLNEYIGCGAAAHSYVDGYRYRNENDIEK----YIECMKENKSPITEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSR 375
              S +   +EF+ MGLR  +GIS K++     +   +L  E  +  +  G +       
Sbjct: 296 LKSSFKSDIEEFMFMGLRKIKGISKKEFYKRFNKEIYDLYGEVIKKYKANGLLVEKD-DY 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L  + +G+ + + V+++  +
Sbjct: 355 LSLSHKGIEVSNYVLSDFIL 374


>gi|300853981|ref|YP_003778965.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           ljungdahlii DSM 13528]
 gi|300434096|gb|ADK13863.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           ljungdahlii DSM 13528]
          Length = 382

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             ++ +Y+H PFC KKC YCDF S+  + K+    + ++   +++ +    G R I +IF
Sbjct: 9   KKAVALYIHIPFCKKKCLYCDFPSYSGKEKLMVS-YTKALARDIESV----GDRKIRTIF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  ++   I + + K  T   N+E T+E NP +   + F+  RK GVNR+S+
Sbjct: 64  IGGGTPTYLSLESWNNIYEVLKKINT-EDNLEFTVEGNPGTFTEDKFKVLRKMGVNRLSI 122

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ +   L+ +GR H   + +    +AR   F  ++ DL++ LP QT+  W+  LQ  
Sbjct: 123 GLQAWQNSILKCIGRIHTLEDFLKTYDMARKFGFSNINIDLMFGLPGQTIKDWKESLQNV 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    +H+S Y L +EKGT FY  H+   L LP E     +Y  T    S  G   YEIS
Sbjct: 183 VKLNPEHISCYSLIVEKGTPFYNAHQSKSLNLPGEEEERQMYYFTLDFLSKMGYEQYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S    +  HNL YW   +YIG G GAHS V    +R      K+ E ++     N   
Sbjct: 243 NFSKKDRKCKHNLIYWDMEEYIGCGAGAHSYVDGYRYRNT----KNIEEYILQGNLNQFL 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            ++K   S     +EF+ MGLR  +GIS +D+     +++     +      + G + + 
Sbjct: 299 RLDKHKNSICDSMEEFVFMGLRKIDGISTEDFYRRFNKDIYSVYGDVIEKYIKMGILIK- 357

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +  +L  ++RG+ + +SV+ +  +
Sbjct: 358 EGHKLYLSKRGIEVSNSVMCDFIL 381


>gi|68249065|ref|YP_248177.1| coproporphyrinogen III oxidase [Haemophilus influenzae 86-028NP]
 gi|68057264|gb|AAX87517.1| predicted Fe-S oxidoreductase [Haemophilus influenzae 86-028NP]
          Length = 383

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|81428851|ref|YP_395851.1| coproporphyrinogen III oxidase [Lactobacillus sakei subsp. sakei
           23K]
 gi|78610493|emb|CAI55544.1| Putative coproporphyrinogen oxidase, HemN [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 379

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 122/381 (32%), Positives = 192/381 (50%), Gaps = 12/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G Y+H PFC   C YCDFN  V       + ++   + E Q +        I +I+ GGG
Sbjct: 3   GAYIHIPFCEHICYYCDFNK-VFIEGQPVDEYVDMLIREFQLVMAEYPDEKIETIYVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQ 138
           TP+ + P  +  +LDGI +        E T EANP+ + +    Q  +  GVNR+S+GVQ
Sbjct: 62  TPTTLSPAQLQRLLDGIHQYLPYDGG-EFTFEANPNDLQDTAKLQVLKDNGVNRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ +GR H +++   AI  AR   F  +S DLI+ LP+Q+   +   L++A+  
Sbjct: 121 SFNDDILKKIGRIHRSADVYRAIANARQVGFENISIDLIFRLPQQSEADFMDSLKQAIDL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L +EK T+FY + + G L LPS++V   +Y          GL  YEISN +
Sbjct: 181 DLPHYSTYSLILEKKTIFYNLMRQGKLRLPSQDVEAHMYQNAIDSFQQAGLEQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +S HNL YWR   Y G G GA+  +    +     I    + +L+ ++ +   V+E
Sbjct: 241 KPGYQSAHNLTYWRNEKYFGFGAGAYGYLGKDRYHNFGPI----QQYLEPLQAHKVPVIE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
           +  L   +Q +E L +GLR  +G+SVK +E      L     E   N   +G++++ +  
Sbjct: 297 RHVLPLTEQMEEELFLGLRTMQGVSVKHFEEKFRYPLQNIYGETVANQIAKGYLKQ-EGD 355

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T+ G  + + V     +
Sbjct: 356 WLRLTESGKFLGNEVFQEFLL 376


>gi|17232448|ref|NP_488996.1| coproporphyrinogen III oxidase [Nostoc sp. PCC 7120]
 gi|17134094|dbj|BAB76655.1| coproporphyrinogen III oxidase [Nostoc sp. PCC 7120]
          Length = 396

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 202/386 (52%), Gaps = 16/386 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF   V   +   E       ++     E+        P  + +
Sbjct: 12  SAYVHIPFCRRRCFYCDFPIFVVGDRQRGETSVTISGYVDVLCEEIAITPAFGQP--LKT 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+  + +A IL  + K + ++ + EI++E +P + ++ + QGYR  GVNR+
Sbjct: 70  VFFGGGTPSLLSTEQLAQILVTLDKQFGIAPDAEISMEVDPGTFDLAHIQGYRSVGVNRV 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +E+ L+  GR+H+  +  AAI L   +  P  S DLI  LP Q++ QW+  L 
Sbjct: 130 SLGVQAFQEELLKVAGRSHSLKDIFAAIDLIHQVEIPEFSIDLISGLPHQSLDQWQDSLD 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++ A  H+S+Y LTIE GT F + +K GD  LP++   V +Y + Q I +      YE
Sbjct: 190 TAVNIAPTHISIYDLTIEPGTAFGRYYKPGDNPLPTDETTVKMYQMGQKILTGGDYEHYE 249

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y G G GA S V+ G         K    W++ +  N 
Sbjct: 250 ISNYAKPGHQCRHNRVYWENRPYYGFGMGAASYVE-GKRFTRPRKTKEYYQWVQELIAN- 307

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIE 369
           H V++ E         E LM+GLRL +G+S+       G+    E  + LQ    QG+++
Sbjct: 308 HGVIDWEITPKADVLLETLMLGLRLADGVSLAALTEEFGKEKIQELHQCLQPYFTQGWVQ 367

Query: 370 RVQFSRLRCT-QRGMTMLDSVIANLA 394
            V   RLR +   G    + V+A+L 
Sbjct: 368 VV-GDRLRLSDPDGFLFSNVVLADLF 392


>gi|312622227|ref|YP_004023840.1| oxygen-independent coproporphyrinogen iii oxidase
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202694|gb|ADQ46021.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 377

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 208/382 (54%), Gaps = 10/382 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIF 75
            ++G+Y+H PFC +KC YCDF S+           +  +   E+ + ++      I +I+
Sbjct: 2   RNIGLYIHIPFCKRKCYYCDFVSYENVDDDDVIFAYFSALENELIYYKE-NYDIEIDTIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I    I  +L+ I  N+ + SN EITIEANP S+     Q Y  AGVNR+S+
Sbjct: 61  LGGGTPSSISANYILKLLEFICSNFKIKSNCEITIEANPESITHEKLQSYSLAGVNRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL +  LR +GR H++  A+  +      F   S D+I  LP QT   +   L   L
Sbjct: 121 GIQSLNDVELRAIGRVHDSEVALKILSRVPLYFENFSVDVITGLPYQTFKSFMQTLNTLL 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            ++  H+S+Y L IE+GT  ++ +++   +LPSE+    ++   + I S  G++ YEISN
Sbjct: 181 EFSPPHVSIYSLKIEEGTFLFERYEEYKSLLPSEDEERRMFWWAKRILSEIGIYHYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNL YW   +YIG+G  AHS  +   +    +I +    + K +++NG AV
Sbjct: 241 FAKKGFECKHNLKYWNVEEYIGVGCAAHSFFEGYRYYNTSNINE----YAKKIKENGLAV 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQ 372
             KEF+S+E+   EF+++GLR  EG S+ ++    G   + +       L++ G IE V 
Sbjct: 297 EGKEFISNEESEKEFIILGLRKIEGFSLDEFRERFGVEFERKYNSQIEKLKKYGLIE-VN 355

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            SRL+ T+RG+ + + V     
Sbjct: 356 NSRLKLTERGIDLANLVWMEFV 377


>gi|261418475|ref|YP_003252157.1| coproporphyrinogen III oxidase [Geobacillus sp. Y412MC61]
 gi|297529327|ref|YP_003670602.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           C56-T3]
 gi|319767564|ref|YP_004133065.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y412MC52]
 gi|261374932|gb|ACX77675.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y412MC61]
 gi|297252579|gb|ADI26025.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           C56-T3]
 gi|317112430|gb|ADU94922.1| oxygen-independent coproporphyrinogen III oxidase [Geobacillus sp.
           Y412MC52]
          Length = 379

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++  Y H PFC   C YCDFN      +   ++++++   EM W     G   + ++F G
Sbjct: 2   AVSAYFHIPFCAHICHYCDFNKVFAAGQ-PIDDYLRAMDKEMAWTAAEFGS-QLKTLFIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+++EP  +  +L  I +++       E T+EANP  +        R AGVNR+SLG
Sbjct: 60  GGTPTVLEPAQLGCLLASIHRHFQFDPQTAEFTVEANPDGLTKEKLAILRDAGVNRLSLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ ++Q L+ +GR H   + I A+ LAR   F  +S D++Y LP QT+ Q+  +L+ A 
Sbjct: 120 VQTFDDQLLQTIGRTHRRGDVIRAVALAREVGFQNISIDVMYGLPGQTLEQFTADLEAAF 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  V HLS Y L +E  T+FY   + G L LP E +  ++Y       +A G   YEISN
Sbjct: 180 SLHVPHLSAYSLILEPRTIFYNEWRKGRLRLPGEEMEAEMYEAAMEQMAAAGYRQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G ES HNL YW   +Y GIG GAHS +          I      ++  + +     
Sbjct: 240 YALPGFESRHNLTYWNNEEYYGIGAGAHSYIDGVRRANIGPI----RHYISAIERGQWPH 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQ 372
            +   L++ +Q +E + +GLR  EG+S   +    GR+L       ++R+   G +E  +
Sbjct: 296 RDVRRLTTREQMEEEMFLGLRKTEGVSKACFRQKFGRDLHDIFGAAIRREIENGRLEETE 355

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            + +R T+RG  + + V A   
Sbjct: 356 -THIRLTKRGKLLGNEVFAAFL 376


>gi|25010961|ref|NP_735356.1| coproporphyrinogen III oxidase [Streptococcus agalactiae NEM316]
 gi|77413171|ref|ZP_00789370.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus agalactiae 515]
 gi|23095340|emb|CAD46551.1| unknown [Streptococcus agalactiae NEM316]
 gi|77160789|gb|EAO71901.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus agalactiae 515]
          Length = 376

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + ++Q+ + E +          + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIREFRSY----DITELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I    +  +L  + ++  +++  E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSISAVQLDYLLTELIRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +A
Sbjct: 118 GVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  + HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEIS
Sbjct: 178 LSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++  
Sbjct: 293 RLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKE- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               ++ T++G+ + D+V     V
Sbjct: 352 NNGFIQMTKKGLFLGDTVAEKFIV 375


>gi|150010330|ref|YP_001305073.1| coproporphyrinogen III oxidase [Parabacteroides distasonis ATCC
           8503]
 gi|149938754|gb|ABR45451.1| coproporphyrinogen III oxidase [Parabacteroides distasonis ATCC
           8503]
          Length = 385

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 126/379 (33%), Positives = 200/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S+       +E +I + + EM+  +   G  ++ +I+FGGG
Sbjct: 13  GLYIHVPFCAKRCLYCDFFSNT--EMKYKEPYINALIKEMELRKGYIGNEALETIYFGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I + I + + V+   EIT+EANP  ++       R    NR+S+GVQS
Sbjct: 71  TPSQLDEKDFGKIFEAIYRLFDVAEQAEITLEANPDDMKREYVSLLRNYPFNRVSMGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+   
Sbjct: 131 FHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTKQAWEENLRQAIRLD 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y L  E+GT  YK+ + G +    E ++V  ++      +  G   YEISN + 
Sbjct: 191 VPHLSAYHLIYEEGTALYKLMEAGKVTPVDEELSVSFFSTLIDRLAEAGYLHYEISNFAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+GP AHS   +       S+  + E       +NGH  +E 
Sbjct: 251 PGFFSKHNSSYWTGKKYLGLGPSAHSYNGIDREWNPSSLPIYIEGI-----ENGHPTIES 305

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + +    +
Sbjct: 306 EDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT-GDK 364

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  ++ G+ + D ++++L 
Sbjct: 365 LILSKSGIFVSDGIMSDLL 383


>gi|297559674|ref|YP_003678648.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296844122|gb|ADH66142.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 410

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 193/398 (48%), Gaps = 23/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--------KVGQENFIQSFLTEMQW 61
           ++   G   LG YVH PFCV +C YCDFN++               +E +    + E+  
Sbjct: 21  SLAELGGRPLGFYVHVPFCVTRCGYCDFNTYTAEELVSRDGTATASRETYADQAIAEVAL 80

Query: 62  M-RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
             R LTG R  +S++F GGGTP+L+  +++  ++  + + +  + + E+T EANP +V  
Sbjct: 81  ADRVLTGERPPVSTLFVGGGTPTLLSAEDLGRVVTAVRERFGFTPDAELTTEANPETVTP 140

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +     R+AG  R+S G+QS  E  LR L R H           AR   F  ++ DLIY 
Sbjct: 141 DYLARLREAGFTRVSFGMQSAREHVLRVLERGHTPGRPEQCAEWARRAGFEHVNLDLIYG 200

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +    W   L+ A+S   DH+S Y L +E+GT      + G+L  P ++   D Y +
Sbjct: 201 TPGEGDEDWRASLEAAVSAGPDHVSAYSLIVEEGTRLAARVRRGELAEPDDDTMADRYLM 260

Query: 239 TQSITSAHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            + + +A G  AYE+SN +      S HNL YW  G + G+GPGAHS V           
Sbjct: 261 AEEVLTAAGFSAYEVSNWARTEQGRSRHNLLYWTGGHWWGVGPGAHSHVGGTR----WWN 316

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KHP ++   +       + +E L+ E++  E +++ LR+  G  +   E   GR+    
Sbjct: 317 VKHPAAYAARLAAGHSPGLAREVLTEEERRFERVLLELRVEGGCPLDLLEPH-GRD---- 371

Query: 358 CERNLQRQGFIERV--QFSRLRCTQRGMTMLDSVIANL 393
             +    +G ++    +  R   T RG  + D+V+ +L
Sbjct: 372 AAKRAVAEGLLDADAHEEGRAALTLRGRLLADAVVRDL 409


>gi|325687376|gb|EGD29397.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK72]
          Length = 376

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 200/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDEEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDISHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V+  G A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLEAVKA-GDA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAVVSELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|313905058|ref|ZP_07838428.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           cellulosolvens 6]
 gi|313470128|gb|EFR65460.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           cellulosolvens 6]
          Length = 404

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 129/401 (32%), Positives = 208/401 (51%), Gaps = 33/401 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGG 79
           +Y+H PFCVKKC YCDF S      V Q +++ + L +++   +  G R  +S++F GGG
Sbjct: 6   IYIHIPFCVKKCGYCDFLSFPAGVDV-QRSYVDALLRQIRQYGKKRGQRLPVSTVFIGGG 64

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS+ EP+ +  IL+ + + + V ++ EI++E+NP ++       YR  G+NR+S+G QS
Sbjct: 65  TPSVPEPELLGEILEAVREVFDVRADAEISMESNPGTLTAEKLAAYRNFGINRLSIGCQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++  L+ LGR H   + + +  +AR   F  ++ DL+ ALP QT   WE  L  A S  
Sbjct: 125 MDDAELKRLGRIHTREDFLDSFRMAREAGFDNINIDLMSALPGQTAESWERGLALACSLK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD-------------------LVLPSENVAVDLYNLT 239
            +H+S Y L IE+GT F+  +++ +                     LP E     +Y  T
Sbjct: 185 PEHISAYSLIIEEGTPFFDRYREQEEILARGMDFSGGGQEIPEGEQLPDEETERRMYRRT 244

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR---VKVGSHRVAIS 296
           + I S  G H YEISN+S  G E  HNL YW    Y+G G GA S       G   V   
Sbjct: 245 EEILSVSGYHRYEISNYSLEGRECRHNLGYWTLVPYLGFGLGASSYEEKTGDGEAYVRYR 304

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
                + +L        A  + E+L+   +  EF+++GLRL  G+S+++++   G  L  
Sbjct: 305 NTSDLKKYL----AGDFAPRDLEYLTLRDRQAEFMILGLRLTRGVSLQEFQERFGVRLSD 360

Query: 357 ECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                ++R   QG +E ++  RL  T  G+++ + V+A+  
Sbjct: 361 VYGDKIRRYTGQGLLE-IREGRLFLTADGISVSNVVMADFI 400


>gi|319744940|gb|EFV97271.1| coproporphyrinogen dehydrogenase [Streptococcus agalactiae ATCC
           13813]
          Length = 376

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + ++Q+ + E +          + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIREFRSY----DITELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I    +  +L  + ++  +++  E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSISAVQLDYLLTELIRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +A
Sbjct: 118 GVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  + HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEIS
Sbjct: 178 LSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWENVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++  
Sbjct: 293 RLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKE- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               ++ T++G+ + D+V     V
Sbjct: 352 NNGFIQMTKKGLFLGDTVAEKFIV 375


>gi|16124400|ref|NP_418964.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           crescentus CB15]
 gi|221233083|ref|YP_002515519.1| oxygen-independent coproporphyrinogen-III oxidase [Caulobacter
           crescentus NA1000]
 gi|13421256|gb|AAK22132.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Caulobacter crescentus CB15]
 gi|220962255|gb|ACL93611.1| oxygen-independent coproporphyrinogen-III oxidase [Caulobacter
           crescentus NA1000]
          Length = 384

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 155/386 (40%), Positives = 231/386 (59%), Gaps = 5/386 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPR 69
           MT   + ++G+YVHWP+C + CPYCDFN    R +  ++  +  + + +++  R LTG R
Sbjct: 1   MTDPRAEAVGIYVHWPYCARICPYCDFNVVRDRGRTDEQRALADAIVADLEAQRALTGER 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + SIFFGGGTPSL++P  +A +++   + W+ + ++EI++EANP+  E + F     AG
Sbjct: 61  RLLSIFFGGGTPSLMDPAQVARVIETAKRLWSPADDLEISLEANPTDAETDRFAALAAAG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V R+SLGVQ+L++ SL+ LGRNH+A  A  AI  A   FPR+S DLIYA P QT   W  
Sbjct: 121 VQRLSLGVQALDDASLKALGRNHDAGAARRAIAAAARAFPRLSIDLIYARPGQTDAAWRA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL  A++   +H+S YQLTIE GT F +    G LV P E++A  L+  TQ I  A G  
Sbjct: 181 ELSEAIALGPEHVSPYQLTIEPGTAFDRAVGRGTLVTPDEDLAATLFETTQEIFEAAGFD 240

Query: 250 AYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           AYE+SNH+    A + HNL YWR  DY+G+GPGAH R+ +   R A +  +  + ++  V
Sbjct: 241 AYEVSNHARGEAARARHNLVYWRGVDYVGVGPGAHGRLALPEGRAATTAHRAIKDYIAAV 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
             +G    + E L+ E  A E L++G+R+  G+   +  +L G + D+   R+L   G +
Sbjct: 301 GDHGVG-FQSEILTPEDAALERLVLGMRIDAGVGFDEVAVL-GLDPDVAKVRDLVETGLL 358

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
                +RLR T+ G  +LD +   LA
Sbjct: 359 VE-DRARLRATRAGRLVLDRLTGALA 383


>gi|319898018|ref|YP_004136215.1| fe-s oxidoreductase [Haemophilus influenzae F3031]
 gi|317433524|emb|CBY81907.1| predicted Fe-S oxidoreductase [Haemophilus influenzae F3031]
          Length = 383

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 130/374 (34%), Positives = 206/374 (55%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKISGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +A G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTAAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG G+H ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGSHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|145632729|ref|ZP_01788463.1| coproporphyrinogen III oxidase [Haemophilus influenzae 3655]
 gi|144986924|gb|EDJ93476.1| coproporphyrinogen III oxidase [Haemophilus influenzae 3655]
          Length = 383

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 131/374 (35%), Positives = 205/374 (54%), Gaps = 18/374 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +YVH P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        R + S
Sbjct: 6   PLSLYVHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKNSIQQRKLHS 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 66  IFIGGGTPSLFSSESIAHLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVLAGITRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L+
Sbjct: 126 SMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLR 185

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+  +  H+S YQLTIE  T+F          LP ++   D++     + +  G   YE
Sbjct: 186 QAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFEQGHQLLTMAGYQQYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +L+     
Sbjct: 242 TSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLR----- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE 369
           G  + E++ +    +  EF M   RL E +  +++E   G +            +Q +I 
Sbjct: 297 GEYLYEEKNVPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIV 356

Query: 370 RVQFSRLRCTQRGM 383
               S  + T+ G 
Sbjct: 357 ENADS-WQITEHGK 369


>gi|110803276|ref|YP_699317.1| coproporphyrinogen III oxidase [Clostridium perfringens SM101]
 gi|110683777|gb|ABG87147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens SM101]
          Length = 377

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 115/383 (30%), Positives = 207/383 (54%), Gaps = 11/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ ++E ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLESDELEYLLKEVAKL-NMAKDIEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQKLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENNKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HNL YW   ++IG+G  + S +     +   S+    E ++  + + G A+
Sbjct: 240 YAKKGKECRHNLAYWNMDNWIGVGSASASYMDGKRIKNISSV----EEYINSINEKGEAI 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E    S     +EF+ MGLR   GI   +++     N++    E        G + R +
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKNRFSMNINDVYGEIINKYIDAGLLIR-E 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  +++G+ + + ++A+  +
Sbjct: 355 SGRIFLSEKGIEISNIIMADFLL 377


>gi|229820237|ref|YP_002881763.1| oxygen-independent coproporphyrinogen III oxidase [Beutenbergia
           cavernae DSM 12333]
 gi|229566150|gb|ACQ80001.1| oxygen-independent coproporphyrinogen III oxidase [Beutenbergia
           cavernae DSM 12333]
          Length = 405

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 120/396 (30%), Positives = 186/396 (46%), Gaps = 25/396 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG 67
           + G    + GVY+H PFC  +C YCDFN++      G   Q  +  +   E+    ++  
Sbjct: 21  LPGADERAFGVYLHVPFCRVRCGYCDFNTYTASELGGGASQAAYAATAQREIALAARVLA 80

Query: 68  P-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                 R + ++F GGGTP+L+ P ++A ++  +   W ++   E+T EANP SV   + 
Sbjct: 81  SSGLPERRVETVFVGGGTPTLLPPGDLAGLVRAVDDAWGLAPGAEVTTEANPDSVTPESL 140

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
                AG  R+S G+QS     L  L R H+ +   A +  AR+    +S DLIY  P +
Sbjct: 141 AALADAGFTRVSFGMQSAVPHVLATLDRTHDPARLPAVVAWARDAGLAVSLDLIYGTPGE 200

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  W + L++A++   DH+S Y L +E GT   +    G+L  P  +     Y L  ++
Sbjct: 201 TLDDWRVSLEKAVALDPDHVSAYALVVEPGTAMGRQAARGELPAPDGDDEAAKYELADAV 260

Query: 243 TSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            +  G   YEISN +   A E  HNL YWR  D+ GIGPGAHS V      V     KHP
Sbjct: 261 LADAGYSWYEISNFARTSADECRHNLAYWRGDDWWGIGPGAHSHVGG----VRWWNVKHP 316

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            ++   +         +E L  + +  E +++G+RL  G+  +          D      
Sbjct: 317 RAYAGRLEAATSPAAGRETLDDDARELERVLLGIRLATGLDAER--------ADAAAVAE 368

Query: 362 LQRQGFIERVQFS----RLRCTQRGMTMLDSVIANL 393
           L R G +          RL  T+RG  + D+V+  L
Sbjct: 369 LARGGLVSVRSPGDGGRRLVLTRRGRLLADTVVRAL 404


>gi|332360718|gb|EGJ38527.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK49]
          Length = 376

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y G+G GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGVGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGVSFEDQYGAVVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|161830378|ref|YP_001596523.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 331]
 gi|161762245|gb|ABX77887.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coxiella burnetii RSA 331]
          Length = 375

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 200/381 (52%), Gaps = 21/381 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L  Y+H P+C++KCPYCDFNSH     + +E +I + + E++    L   R I +IF G
Sbjct: 5   PLSFYIHMPWCIRKCPYCDFNSHALHQDLPEEAYINALINELRQQIALIEKRPIHTIFIG 64

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL        + + I K   +   VEIT+EANP SVE   F+GYR+ G+NR+S+GV
Sbjct: 65  GGTPSLFSQTAYQKLFEEIKKQCLLKKEVEITLEANPGSVEQTKFRGYREIGINRLSIGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+A EA  AI++A+   F  ++ DL++ LP Q + +   +LQ AL 
Sbjct: 125 QSFQNDKLKVLGRIHSAEEAKQAINIAKQAGFENINVDLMFGLPDQKVNEALDDLQTALD 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLT+E  T FYK        LP+++   ++ +  + +    G   YE+S +
Sbjct: 185 LEPTHLSWYQLTLEPNTFFYKHPP----ALPTDDYIWEIQSKGRKLLRRDGFAHYEVSAY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HN+NYW +GDY+G+G GAHS++ +          K+P  ++         + 
Sbjct: 241 SRSNRFCQHNINYWEFGDYLGLGAGAHSKLTIQGKITRYWNIKNPRFYMDA---QKPFIE 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDIECERNLQRQGFIE 369
            ++ L+  +   EF+M  LRL++ I +  +    G +       L+   ERNL +     
Sbjct: 298 GRQTLAPNELPLEFMMNALRLQKPIPLTLFTERTGLSPSVLVPWLETAKERNLLQ----- 352

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
                 L  T  G   L+ ++
Sbjct: 353 -CDNKYLTVTPLGHHFLNELL 372


>gi|322389727|ref|ZP_08063274.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           903]
 gi|321143566|gb|EFX38997.1| coproporphyrinogen dehydrogenase [Streptococcus parasanguinis ATCC
           903]
          Length = 376

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   + ++   + E +         ++ +++
Sbjct: 3   TKPTSAYVHIPFCTQICFYCDFSKVFIKNQ-PVDAYLDHLIQEFRRE----EITNLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L  + K+  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALTADQLAYLLKELTKSLDLSQMEELTIEANPGDLDPDKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNRLLKKIGRSHQEQDIYDNIDRLKLAGFDNISIDLIYALPTQTMEQVQENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  + H+SLY L +E  T+F    + G L LP E +  +++          G   YEIS
Sbjct: 178 LALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEEMEAEMFEYIIQEMERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y G+G GA   V    ++    I      +++ V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGLGAGASGYVDGIRYKNHGPI----RHYMQAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+  +  +E + +GLR + G+S K +E   G N D +       L +QG +   
Sbjct: 293 RVQEEHLTQTEMMEEEMFLGLRKKTGVSKKRFEEKFGVNFDQQYGSVVEKLIQQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DKDIVRMTKKGLFLGDTVAEKFIL 375


>gi|213965780|ref|ZP_03393972.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium amycolatum SK46]
 gi|213951539|gb|EEB62929.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium amycolatum SK46]
          Length = 387

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 117/388 (30%), Positives = 194/388 (50%), Gaps = 18/388 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQW--MRQLTGPRS 70
           ++S GVY+H PFC  +C YCDFN++          Q +++ + + E++   ++     R 
Sbjct: 8   TDSFGVYLHVPFCATRCGYCDFNTYTPGQLGSGATQGDYLDAIVAELEMAVVKHPELARG 67

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             ++F GGGTPS++    +  +LDG+  ++ ++ + E+T E+NP S     F+G  +AG 
Sbjct: 68  ADTVFVGGGTPSMLGASGLRRLLDGVRNSFGLADDAEVTTESNPESTSPEFFEGLAEAGF 127

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
            R+SLG+QS     L  L R H     A A        F  ++ D+IY  P ++M   + 
Sbjct: 128 TRVSLGMQSAVPHVLTTLDRTHTPGRPAAAVAEARAAGFEHINLDVIYGTPGESMADLDT 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+  L+  VDH+S Y L +E GT   +  + G+L +P ++   D Y    +  S  G  
Sbjct: 188 TLEAVLATEVDHVSAYSLIVEPGTAMARKVRRGELPMPDDDDLADRYERIDAALSQAGFS 247

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN +  G +  HN+ YWR G++ G GPGAHS +       A    KHP  +   + 
Sbjct: 248 WYEVSNWAKPGGQCRHNMIYWRDGNWWGAGPGAHSHLDGTRFYNA----KHPARYAATIS 303

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                + + E L++E +  E +M+GLRL EGI         G +   +  R  +  G +E
Sbjct: 304 GGELPIKDSEELTAEDRHTEKIMLGLRLAEGIDANLL----GEDELGKARRQAEA-GMVE 358

Query: 370 ---RVQFSRLRCTQRGMTMLDSVIANLA 394
                   R++ T RG  + D++I ++ 
Sbjct: 359 FVSVDGGQRIQLTNRGRLLADAIIVDIL 386


>gi|311743002|ref|ZP_07716810.1| coproporphyrinogen III oxidase [Aeromicrobium marinum DSM 15272]
 gi|311313682|gb|EFQ83591.1| coproporphyrinogen III oxidase [Aeromicrobium marinum DSM 15272]
          Length = 402

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 129/379 (34%), Positives = 191/379 (50%), Gaps = 20/379 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           + GVYVH PFC  +C YCDFN++          + ++  + + E++     TGPR IS++
Sbjct: 35  AFGVYVHIPFCTVRCGYCDFNTYTADELGEGATRASYADTAIAEIRRAAATTGPREISTV 94

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTP+ +   ++  +L  I + W ++ +VE+T EANP SV+    Q  R  G NRIS
Sbjct: 95  FFGGGTPTQLPAADLVRVLRAIDEAWGLADDVEVTTEANPDSVDPQALQTLRAGGFNRIS 154

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQS     L  L R H+ +    A+  AR   F ++S DLIY  P +++  W   L  
Sbjct: 155 FGVQSAVPHVLAVLDRTHDPARVPDAVRWARAAGFEQVSVDLIYGSPTESVDDWRRTLDH 214

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+  A DH+S Y L +E+GT F +    G+LV+P ++   D Y L   +  A GL  YE+
Sbjct: 215 AVDLAPDHVSAYALIVERGTAFARRVARGELVMPDDDETADKYLLADDVLGAAGLSWYEL 274

Query: 254 SNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN +    A   HN  YW  G++ GIGPGAHS ++           KHP ++ + +    
Sbjct: 275 SNWALDDAARCRHNELYWNGGEWWGIGPGAHSFLQG----RRWWNVKHPAAYAQRLAAGE 330

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
                 E + ++    E +M+ +RLREGI+                   L R   +ER Q
Sbjct: 331 TVEAGSEAIDADTARLEDVMLRMRLREGIAADGL----------IGVDQLVRDDLLER-Q 379

Query: 373 FSRLRCTQRGMTMLDSVIA 391
             R+  T  G  + D VI 
Sbjct: 380 GDRVTLTLTGRLLADHVIR 398


>gi|255012406|ref|ZP_05284532.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_7]
          Length = 375

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 126/379 (33%), Positives = 200/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S+       +E +I + + EM+  +   G  ++ +I+FGGG
Sbjct: 3   GLYIHVPFCAKRCLYCDFFSNT--EMKYKEPYINALIKEMELRKGYIGNEALETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I + I + + V+   EIT+EANP  ++       R    NR+S+GVQS
Sbjct: 61  TPSQLDEKDFGKIFEAIYRLFDVAEQAEITLEANPDDMKREYVSLLRNYPFNRVSMGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+   
Sbjct: 121 FHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTKQAWEENLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y L  E+GT  YK+ + G +    E ++V  ++      +  G   YEISN + 
Sbjct: 181 VPHLSAYHLIYEEGTALYKLMEAGKVTPVDEELSVSFFSTLIDRLAEAGYLHYEISNFAR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+GP AHS   +       S+  + E       +NGH  +E 
Sbjct: 241 PGFFSKHNSSYWTGKKYLGLGPSAHSYNGIDREWNPSSLPIYIEGI-----ENGHPTIES 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + +    +
Sbjct: 296 EDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT-GDK 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  ++ G+ + D ++++L 
Sbjct: 355 LILSKSGIFVSDGIMSDLL 373


>gi|323483787|ref|ZP_08089166.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
 gi|323402872|gb|EGA95191.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
          Length = 408

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 125/401 (31%), Positives = 212/401 (52%), Gaps = 15/401 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
               T + +  L +Y+H PFCVKKC YCDF S     +V ++ +++  + E++       
Sbjct: 10  NQAGTMENNTPLELYIHIPFCVKKCLYCDFLSFAA-DEVTRKKYVEQLIKEIETCGTRIT 68

Query: 68  PR------SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            R       + S+F GGGTPS + P+ I  +++ + +N+ +  + EITIEANP +++   
Sbjct: 69  GRDADAAFPVISVFIGGGTPSSLCPEQICAVMNAVKENFRLLPDAEITIEANPGTLDNKK 128

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            + Y+ +G+NR+SLG+QS     LR LGR H+ +E + +  LAR   F  ++ DL+ ALP
Sbjct: 129 LRAYKNSGINRLSLGLQSANPGELRELGRIHSWNEFLESYRLAREAGFDNINVDLMSALP 188

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q+   +   L+       +H+S Y L IE+GT FY  +     VLP E     +Y+ T+
Sbjct: 189 GQSFESYADTLECVALLEPEHISAYSLIIEEGTPFYDKYSGRAEVLPDEEEDRRMYHHTK 248

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              +  G H YE+SN++  G E +HN+ YW  G Y+GIG GA S ++     V   +  +
Sbjct: 249 EYLAEKGYHRYEVSNYARPGRECIHNVGYWTGGSYLGIGLGASSLMEGQRFSVIREMNDY 308

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
            +   + + +       +E L+ + + +EF+ +GLRL EGI+ KD++   G N++     
Sbjct: 309 LDLSREELAEGRQ-YENREILTEQDEMEEFMFLGLRLTEGIAAKDFKKRFGLNIEEIYGM 367

Query: 359 -ERNLQRQGFIERV---QFSRLRCTQRGMTMLDSVIANLAV 395
               L   G +E     +  R R ++ G+ + + V+A   +
Sbjct: 368 TIGKLMEDGLMEMTGTKEDRRYRLSEFGLDVSNCVLAEFLL 408


>gi|56421042|ref|YP_148360.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
 gi|56380884|dbj|BAD76792.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
          Length = 379

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 198/382 (51%), Gaps = 12/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++  Y H PFC   C YCDFN      +   ++++++   EM W     G   + ++F G
Sbjct: 2   AVSAYFHIPFCAHICHYCDFNKVFAAGQ-PIDDYLRAMDKEMAWTAAEFGS-QLKTLFIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+++EP  +  +L  I +++   S   E T+EANP  +        R AGVNR+SLG
Sbjct: 60  GGTPTVLEPAQLGCLLASIHRHFQFDSQTAEFTVEANPDGLTKEKLAILRDAGVNRLSLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ ++Q L+ +GR H   + I A+ LAR   F  +S D++Y LP QT+ Q+  +L+ A 
Sbjct: 120 VQTFDDQLLQTIGRTHRRGDVIRAVALAREVGFQNISIDVMYGLPGQTLEQFTADLEAAF 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  V HLS Y L +E  T+FY   + G L LP E +  ++Y       +A G   YEISN
Sbjct: 180 SLHVPHLSAYSLILEPRTIFYNEWRKGRLRLPGEEMEAEMYEAAMEQMAAAGYRQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G ES HNL YW   +Y GIG GAHS +          I      ++  + +     
Sbjct: 240 YALPGFESRHNLTYWNNEEYYGIGAGAHSYIDGVRRANIGPI----RHYISAIERGQWPH 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQ 372
            +   L++ +Q +E + +GLR  EG+S   +    GR+L       ++R+   G +E  +
Sbjct: 296 RDVRRLTTREQMEEEMFLGLRKTEGVSKACFRQKFGRDLHDIFGAAIRREIENGRLEETE 355

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            + +R T+RG  + + V A   
Sbjct: 356 -THIRLTKRGKLLGNEVFAAFL 376


>gi|157825359|ref|YP_001493079.1| coproporphyrinogen III oxidase [Rickettsia akari str. Hartford]
 gi|157799317|gb|ABV74571.1| coproporphyrinogen III oxidase [Rickettsia akari str. Hartford]
          Length = 393

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 155/385 (40%), Positives = 232/385 (60%), Gaps = 8/385 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +Y+HWPFC+ KCPYCDFNSHV    +    +I+S+ TE+++ + +   + I SIF
Sbjct: 12  ADDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHNQWIKSYETEIEYFKNIIQNKYIKSIF 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  + LI++ I     + +  EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 71  FGGGTPSLMNPVLVELIINKINNLAILDNRTEITLETNPTSFETEKFKAFKSAGINRVSI 130

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+A +AI  I  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 131 GVQSLKEDDLKKLGRTHDALQAIKTIEQANGIFPRVSFDLIYARSGQKLKDWQEELKQAM 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGT FYK+  +G+L++P  + A ++Y  T    ++     YEISN
Sbjct: 191 QLANGHISLYQLTIEKGTPFYKLFNEGNLIVPHSDAAAEMYEWTNHYLASKKYFRYEISN 250

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVRKNGHA 314
           ++    + LHNL YW Y   +GIGPGAHSR+   S  VA  +  H PE WL  V+     
Sbjct: 251 YALANQKCLHNLTYWHYNSCLGIGPGAHSRIIEPSGSVAAIMMWHKPEKWLDSVKTKNVG 310

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++  +E LMMGLRL +GI++   E          LD+   ++ Q    I+ 
Sbjct: 311 IQTNAKLTHQEIIEEILMMGLRLSKGINISTLEQKINAKLMDILDMNNLKHYQALDLIKL 370

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   +  T +G+ +   ++  L +
Sbjct: 371 DKN--IYLTDKGLMLHSYIVPRLII 393


>gi|325124369|gb|ADY83892.1| putative oxidase [Acinetobacter calcoaceticus PHEA-2]
          Length = 384

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 133/393 (33%), Positives = 211/393 (53%), Gaps = 16/393 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +  A + + +          EIT+EANP ++E + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLKFEDGCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y  AG+NR+S+GVQ+   + L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLDAGINRLSIGVQTFNTEHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+ +   H+S YQLTIE  T+F++       +LP + V  D+    ++  
Sbjct: 181 LGQALYDLKVAVEHGATHISWYQLTIEPNTVFFR----TQPILPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFVNYEVSAWRKE-QPSAHNLNYWEFGDYLAIGAGAHGKVTQPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERN 361
           +L  V      + + E   +E+   EF+M  LRL +G+  + +E   G +LD   E   +
Sbjct: 296 YLAKVPAEHLQMKKIE---AEEIPFEFMMNALRLNDGVKAELYEQRTGLSLDHLNEVLTS 352

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ +  +     +RL CT++G   L+SV+    
Sbjct: 353 LRARKLLVE-DDARLACTEQGHIFLNSVLEEFL 384


>gi|39995141|ref|NP_951092.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           sulfurreducens PCA]
 gi|39981903|gb|AAR33365.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Geobacter sulfurreducens PCA]
 gi|307634646|gb|ADI82894.2| oxygen-independent coproporphyrinogen III oxidase, putative
           [Geobacter sulfurreducens KN400]
          Length = 385

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 200/386 (51%), Gaps = 9/386 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--- 72
           +  L +YVH PFC+KKC YC F S      +  +++      EM+       P  +S   
Sbjct: 2   NEPLHLYVHIPFCLKKCRYCSFVSR-SDAPLAIDDYASLVAREMEMRVAAANPLPLSPAT 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPSL+ P  +  I+D  A+++ +    EIT+EANP +V       +R AGVNR
Sbjct: 61  TLYLGGGTPSLLSPAALERIIDAAARSYGLGPGAEITLEANPGTVTFQRLADFRSAGVNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQS ++  L  LGR H A +A  A+    R  F  +  DLI++LP QT  QW  +L
Sbjct: 121 LSLGVQSFDDGMLVLLGRLHTARQAREAVAATRRAGFDNIGIDLIHSLPGQTPDQWREQL 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A++   DH+S Y LT+E+GT F  M + G+LVLP E  +  ++  T  +  + G   Y
Sbjct: 181 ACAVALNPDHVSAYGLTVEEGTPFAAMEERGELVLPDEEQSALMFEATTDVLVSAGFEHY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EI+N +     S HN  YW   +Y+G G GAHS ++  +  V        E +   +   
Sbjct: 241 EIANFARPHRRSRHNQVYWLRRNYLGFGAGAHSFLRAPAFGVRWKNTDDLELYRDTLAAA 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFI 368
                E+  LS      EF  +GLRL +G+  +D+    G  ++    R ++R    G +
Sbjct: 301 ELPGEERTVLSRADAMAEFFFLGLRLLDGVREEDFVREFGDTMENVYGREMERLCSAGLL 360

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
            R +  RL+ ++RG+ + + V A+  
Sbjct: 361 MR-EGGRLKLSRRGVILANRVFASFL 385


>gi|88801070|ref|ZP_01116618.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
 gi|88776209|gb|EAR07436.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
          Length = 387

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 130/381 (34%), Positives = 207/381 (54%), Gaps = 15/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L VYVH P+CV+KCPYCDFNSH      +  + F++ F  ++     L   R I+S+FF
Sbjct: 9   PLSVYVHIPWCVRKCPYCDFNSHAADPDSIPVDAFVERFRQDLNQDAPLAQGRPITSVFF 68

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + I  IL+ +        + EIT+EANP + E   F  YR AGVNR+S+G
Sbjct: 69  GGGTPSLLPAKAIGQILESLNSVIGFEPDAEITLEANPGTFEAERFADYRAAGVNRLSIG 128

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  ++ L  LGR H+   A+ AI  AR+  F  ++ DL++ LP+Q++     +L +A+
Sbjct: 129 VQSFADRFLSVLGRIHSGDNAVQAIRQARSVGFDNLNIDLMHGLPEQSIDDALADLNQAI 188

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLS YQLTIE+ T FY+        LP+E+   D+    Q++  + G H YE+S 
Sbjct: 189 DLEPTHLSWYQLTIEQNTEFYRQPP----PLPAEDTLWDIQQAGQALIDSAGYHQYEVSA 244

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEKHPESWLKMVRKNG 312
           ++    E  HNLNYW+YGD++G+GPGAH ++         +     + P+ +L       
Sbjct: 245 YAQTDRECRHNLNYWQYGDFLGLGPGAHGKITRLDDAGEIIRTRKTRLPKDYL---NSER 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIER 370
             +  +E ++   +  ++ +  LRLR  +S+  +E + G +          L+ +G+I+R
Sbjct: 302 PLIRMEEAVTEVDRPFDYFINTLRLRTPVSLTHFEQMTGLSRADIAPQLDALEAKGWIKR 361

Query: 371 VQFSRLRCTQRGMTMLDSVIA 391
                   ++ G   L+ V++
Sbjct: 362 T-GDLFSTSESGYLYLNEVLS 381


>gi|294085189|ref|YP_003551949.1| coproporphyrinogen III oxidase-like protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664764|gb|ADE39865.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 410

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 173/411 (42%), Positives = 235/411 (57%), Gaps = 17/411 (4%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           M + +   +++     + LG+YVHWPFC  KCPYCDFNSHV    +  + F+ ++LTEM 
Sbjct: 1   MHHQTKAASSLAPPPVSPLGLYVHWPFCKAKCPYCDFNSHVS-NDIDADAFLAAYLTEMT 59

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +M  QL  P S+SSIFFGGGTPSL+    +  I+D  A  +     +EI+ EANP+SVE 
Sbjct: 60  YMADQLEQPASLSSIFFGGGTPSLMPAFVVEGIIDKAAAIFGFMPAIEISAEANPTSVEA 119

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
           +    +  AGVNRIS+GVQSL + +L FLGR H+A EA  A+   R  F  MS DL+YA 
Sbjct: 120 SKMLDFHHAGVNRISMGVQSLRDDTLAFLGREHSADEARKALTTVRTAFDNMSIDLMYAT 179

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   W  EL  AL+  +DHLSLYQLTIE GT FY   + G+++   ++ A  L+++T
Sbjct: 180 PNQTPADWHDELSTALALGLDHLSLYQLTIESGTHFYTRQRRGEVMALDDDHAATLFDIT 239

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           + +T   GL AYEISNH+  G E  HNL YW+ G+++GIGPGAHSR     HR+ IS  +
Sbjct: 240 RMLTRDAGLPAYEISNHAKDGYECRHNLIYWQSGNWLGIGPGAHSRFTQQDHRIGISTRR 299

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDI 356
            P  WL  + K+GHA            A E LMMGLRL  G+S+       G     LDI
Sbjct: 300 SPAGWLAAIAKDGHATDTLVTDGKNDWAAEMLMMGLRLTSGLSLARLSAACGPYHNWLDI 359

Query: 357 ECERNLQRQGFI------------ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           E  R     G++              +    +R +  G   L+ ++A L +
Sbjct: 360 EGLRKCHDAGWLLVTPDITAINADTDIANLHIRASDAGAIRLNHILAELIL 410


>gi|121593341|ref|YP_985237.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax sp. JS42]
 gi|222110070|ref|YP_002552334.1| oxygen-independent coproporphyrinogen iii oxidase [Acidovorax
           ebreus TPSY]
 gi|120605421|gb|ABM41161.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidovorax sp. JS42]
 gi|221729514|gb|ACM32334.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           ebreus TPSY]
          Length = 414

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 136/382 (35%), Positives = 210/382 (54%), Gaps = 14/382 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYK------VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           YVH P+C++KCPYCDFNSH  R        V +  +I + L +++    L   R++ SIF
Sbjct: 38  YVHLPWCLRKCPYCDFNSHEARGGMGGDGGVPEARYIDALLADLEAALPLIWGRTVHSIF 97

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++I  +L  I     + +  EIT+EANP + E   F+ YR AGV R+S+
Sbjct: 98  IGGGTPSLFAPESIDRLLGDIRARLRLDAGCEITLEANPGTFEKERFRAYRGAGVTRLSI 157

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  ++ L+ LGR HN ++A+AA+  A   F   + D++YALP QT  + + +++ AL
Sbjct: 158 GVQSFNDRHLQALGRVHNRAQALAAVEEAAQAFDTFNLDIMYALPGQTPAELDEDMRTAL 217

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    H+S+Y LTIE  T F K        LP ++ A  + +    +T A GL  YE+S 
Sbjct: 218 ALQPPHISIYHLTIEPNTYFAKYPP----PLPEDDAAYAMLDRITELTGAAGLARYEVSA 273

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G + +HN NYW++GDY+GIG GAHS++      V     + P+ ++      G A+
Sbjct: 274 YAREGHQCVHNRNYWQFGDYLGIGAGAHSKLSFAHRVVRQVRLRDPQLYMAGALA-GRAI 332

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQF 373
            + + +       EF++  LRL+EG +++D+    G  +       +  + QG I R   
Sbjct: 333 AQDDDVRRADLPFEFMLNALRLQEGFALQDFTARTGLAITAIAAGLQQAEAQGLITR-DM 391

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            R+R TQRG   L  + A    
Sbjct: 392 ERVRPTQRGFDFLSDLQALFLA 413


>gi|319947179|ref|ZP_08021413.1| coproporphyrinogen dehydrogenase [Streptococcus australis ATCC
           700641]
 gi|319747227|gb|EFV99486.1| coproporphyrinogen dehydrogenase [Streptococcus australis ATCC
           700641]
          Length = 376

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 118/384 (30%), Positives = 192/384 (50%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + ++L  +    +      + +++
Sbjct: 3   AKPSSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDAYLEHLIQETRSYEIGKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  Q +A +L  + K   +S   E TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAQQLAYLLTELPKVMDLSEVEEFTIEANPGDLDTDKIAVLKDSQVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L+ +GR+H   +    I  L +  F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDNKMLKKIGRSHQEQDIYDNIRYLKQAGFDNISIDLIYALPGQTMDQVKENIAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++          G   YEIS
Sbjct: 178 IDLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIEELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y G+G GA   V    ++    I      +L+ V   G A
Sbjct: 238 NFSKPGFESRHNLVYWDNAEYYGLGAGASGYVDGIRYKNHGPI----RHYLEAVEA-GKA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ E++ +E L +GLR + G+S   +E   G + D    +   +L  QG +   
Sbjct: 293 RITEEHLTLEEKMEEELFLGLRKKTGVSKARFEEKFGVSFDQRYGQVVASLTGQGLLVPD 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T+RG+ + D+V     +
Sbjct: 353 DKQ-VRMTKRGLFLGDTVAEKFIL 375


>gi|77407971|ref|ZP_00784721.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae COH1]
 gi|77173429|gb|EAO76548.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae COH1]
          Length = 376

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 204/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + ++Q+ + E +          + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIREFRSY----DITELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I    +  +L  ++++  +++  E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN  +  + I   +   F  +S DLIYALP QTM      + +A
Sbjct: 118 GVQTFNDKHLKRIGRSHNEVQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  + HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEIS
Sbjct: 178 LSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +  +E L +GLR ++G+S+  +E   G + +    +  + LQ  G ++  
Sbjct: 293 RLSEEVLSKNEMMEEELFLGLRKKKGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKE- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               ++ T++G+ + D+V     V
Sbjct: 352 NNGFIQMTKKGLFLGDTVAEKFIV 375


>gi|159039369|ref|YP_001538622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salinispora arenicola CNS-205]
 gi|157918204|gb|ABV99631.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salinispora arenicola CNS-205]
          Length = 407

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 131/398 (32%), Positives = 209/398 (52%), Gaps = 19/398 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQ---W 61
              +T  G+   GVY+H PFC  +C YCDFN++      G   +E ++++ L E+     
Sbjct: 19  ATALTSSGTRGFGVYLHVPFCASRCGYCDFNTYTAAELGGGASREEYVEAILAELALAAR 78

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           + +   P  + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   +
Sbjct: 79  VLREHRPPRVDTVFVGGGTPTLLPATDLARILDGIDRTWGLAADAEVTTEANPESVTPRS 138

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
               R AG  RISLG+QS     L  L R H+A  A+AA   AR+  F  ++ DLIYA P
Sbjct: 139 LAALRAAGYTRISLGMQSASPGVLAVLDRQHSAGRAVAAAQEARDVGFEHVNVDLIYATP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   +   L +A++  VDH+S Y L +E+GT      + G+L  P ++VA D Y   +
Sbjct: 199 GESAADFAASLDQAITAGVDHVSAYALIVEEGTRLAAQVRRGELAYPCDDVAADRYLAAE 258

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +   A G   YE+SN +    A   HNL YW  GD+ G+GPGAHS +      V     K
Sbjct: 259 AALDAAGFSWYEVSNWARTPAARCRHNLLYWTGGDWWGLGPGAHSHIGG----VRWWNVK 314

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + +       + +E L++++   E +M+ LRL +G+ ++     AGR       
Sbjct: 315 HPATYAQRLAAGASPGLAREVLTADEAHTEEVMLRLRLADGLPLEVLGS-AGR----AGA 369

Query: 360 RNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLAV 395
              ++ G +    +   R   T RG  + D+V+ +L  
Sbjct: 370 DRARKAGLLVESAYAAGRAVLTLRGRLLADAVVRDLLA 407


>gi|323351663|ref|ZP_08087317.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis VMC66]
 gi|322122149|gb|EFX93875.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis VMC66]
          Length = 376

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 197/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYHSYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  +  L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDHMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDMKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALGIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELKKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEALTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + +R T++G+ + D+V     +
Sbjct: 352 DRNIVRMTKQGLFLGDTVAEKFIL 375


>gi|164686297|ref|ZP_02210327.1| hypothetical protein CLOBAR_02735 [Clostridium bartlettii DSM
           16795]
 gi|164601899|gb|EDQ95364.1| hypothetical protein CLOBAR_02735 [Clostridium bartlettii DSM
           16795]
          Length = 368

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 121/376 (32%), Positives = 203/376 (53%), Gaps = 13/376 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFCV+KC YCDFNS+ +  K  +E F+     EM         R I++IFFGG
Sbjct: 2   LGLYIHIPFCVQKCKYCDFNSY-KIEKDKKEKFLNDLKKEMSLY--TNKDRKINTIFFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    + +I+D I KN+ +  + EI++E NP ++     +  +  G+NR+S+G+Q
Sbjct: 59  GTPSILSNTEMKMIMDEINKNFCIDKDAEISMECNPGTLNKEKLEFMKSLGINRLSIGLQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++E  L ++GR HN  +       AR   F  ++ DL+Y LP QT   W+  L + +  
Sbjct: 119 AVQEDLLGYIGRIHNYEQFEKNYIEARKAGFKNINIDLMYNLPHQTFEDWKETLDKIIEL 178

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +E+GT  Y M+ D D  L  E+  + +Y         +G   YEISN++
Sbjct: 179 NPEHISAYSLILEEGTQLYDMYMDKDFELSDEDEDIKMYEYAIECLKLNGYKQYEISNYA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN+ YW+  +YIG+GPGA   +    +    +  K  + +   + KN   +  
Sbjct: 239 KEGYECKHNILYWKCKNYIGLGPGASGYINNVRY----NNVKDLDDYHDKLSKNEKPIEF 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG---FIERVQFS 374
            E L+ + + +E ++MGLR+ +GI  KD+E   G N + + +  L++      I +    
Sbjct: 295 CENLTEKDKIEEKIIMGLRMNDGIIFKDFEE-FGINFEEKYKEQLKKHESLDLITKTNKG 353

Query: 375 RLRCTQRGMTMLDSVI 390
             + TQ+G  + +++ 
Sbjct: 354 -FKFTQKGREISNNIF 368


>gi|329946957|ref|ZP_08294369.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328526768|gb|EGF53781.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 411

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 112/401 (27%), Positives = 179/401 (44%), Gaps = 23/401 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGP 68
                    VY+H P+C  +C YCDFN++           ++F+ +   E++  R     
Sbjct: 13  PNGSERPFSVYLHVPYCRVRCGYCDFNTYTNLTMGQGASAKDFVGTLAGELRAARSAMDS 72

Query: 69  -----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R   ++F GGGTP+++   ++  +LD + + + ++ + E+T EANP SV+     
Sbjct: 73  AGLPVRPAQTVFVGGGTPTMLPASDLVTMLDLVRECFGLAPDAEVTTEANPDSVDEAGLA 132

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              + G  R+S G+QS     L+ L R H  +     +  AR      S DLIY  P ++
Sbjct: 133 ALAEGGFTRVSFGMQSAVPHVLKVLERTHEPARVPRVVDWARRAGLSTSLDLIYGAPGES 192

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W+  L        DH+S+Y L IE+GT  +   + G+L +P ++     Y +  +  
Sbjct: 193 LEDWQRSLDAVTQIGPDHVSVYALVIEEGTRMWSQVRRGELPMPEDDDEATKYEMADASL 252

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN +  GAE  HN  YW   D+ G GPGAHS +      V +   KHP +
Sbjct: 253 RQAGYEWYEISNWARPGAECRHNQAYWLDWDWWGGGPGAHSHLGD----VRLWNTKHPVA 308

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-------- 355
           W   +      V   E + +  +  E +M+ +RLREGI++      +   LD        
Sbjct: 309 WAGQISTGHLPVAGHEVIDAGSRELERIMLSIRLREGIALASLSGPSDGPLDDVGATPSH 368

Query: 356 -IECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
            +     L   G ++       R   T RG  M D+V   L
Sbjct: 369 LVPVVAGLVADGLLDDGAASKGRAVLTLRGRLMADTVTRAL 409


>gi|331005485|ref|ZP_08328863.1| coproporphyrinogen III oxidase [gamma proteobacterium IMCC1989]
 gi|330420677|gb|EGG94965.1| coproporphyrinogen III oxidase [gamma proteobacterium IMCC1989]
          Length = 399

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 135/386 (34%), Positives = 215/386 (55%), Gaps = 16/386 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +Y+H P+CV+KCPYCDFNSH    K   + + +++++   ++Q   Q T  R +SSI
Sbjct: 8   PLSLYIHIPWCVQKCPYCDFNSHQAEQKNNTLNELDYVETLKNDLQLESQFTYGRKLSSI 67

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPS+    +IA ILD   K      ++EIT+EANP + E   F G+  AGVNR+S
Sbjct: 68  FFGGGTPSIFSAHSIAAILDHAKKIIGFEDDIEITLEANPGTFEQEKFAGFYAAGVNRLS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS  E+ L+ LGR HN+ EA  AI +A+   F  ++ D+++ LP+Q++     +LQ+
Sbjct: 128 IGVQSFNEKHLQTLGRIHNSDEAKRAISIAKKAGFSNINIDIMHGLPQQSVDDAMKDLQQ 187

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+  +  H+S YQLTIE  T FY+        LP++++  D+      + + +G   YEI
Sbjct: 188 AIDCSPQHISWYQLTIEANTAFYRQPP----TLPNDDILADIQERGSLLLTDNGFAQYEI 243

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  S     SLHNLNYW++GDY+G+G GAH ++        +     + P+ +LK  +  
Sbjct: 244 SAFSKNNQRSLHNLNYWQFGDYLGVGAGAHGKITDISNGRIIRRQKTRLPDHYLKNAKA- 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
                ++  +++ +   EF+M  LRL EG+    +E   G  L  E + +L      + +
Sbjct: 303 --PKTKQHTVATHELNIEFMMNALRLIEGVPSDFFEKRTGLAL-AEIQDSLTELQQQQLL 359

Query: 372 QF--SRLRCTQRGMTMLDSVIANLAV 395
               + ++ T  G   L+ V+  L+ 
Sbjct: 360 AEASTHIKTTPLGQRFLNVVLEKLSA 385


>gi|302391388|ref|YP_003827208.1| oxygen-independent coproporphyrinogen III oxidase [Acetohalobium
           arabaticum DSM 5501]
 gi|302203465|gb|ADL12143.1| oxygen-independent coproporphyrinogen III oxidase [Acetohalobium
           arabaticum DSM 5501]
          Length = 378

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 211/383 (55%), Gaps = 10/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+H+PFC++KC YCDFNS   +  +  E F  +   E++ +        + SIF 
Sbjct: 2   EEYGLYIHFPFCIQKCYYCDFNSVAWQDDLAAE-FFTALCEEIKLVAADYDYPQLKSIFL 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS    Q IA +L  +   + + + +E+TIEANP +V+ N  + +++ G+NR+S G
Sbjct: 61  GGGTPSCFSGQTIAELLSVLEDEFRLKTELEVTIEANPGTVDQNKLEIFKEVGINRLSFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS + + L  LGR H A +A    +LAR   F  ++ DLI+A+P Q ++QW++ L+ AL
Sbjct: 121 VQSFDNRILNKLGRIHTAQKAEKNYYLAREVGFANINLDLIFAIPGQKLSQWKVTLESAL 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A +HL+ Y L IE GT   K    G +    +++ +++Y LT+ +   +G   YEISN
Sbjct: 181 QLAPEHLATYNLKIEPGTKLGKDLAQGRIEPVCQDLDLEMYQLTKKLLIDNGYEHYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G  S HN  YW+   Y+ +GPGAH            +  +    ++ +++     V
Sbjct: 241 FAKPGYRSEHNQIYWQNEPYLALGPGAH----FYDGEFRGNNLESIGEYINVIKDGEKPV 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
             +E LS E +  E +++GLRL+EGIS  ++E   G    N+  E  + L +QG IE + 
Sbjct: 297 EIEESLSREDKIIETMILGLRLKEGISTLEFEERFGESVHNIYNEELKKLNKQGLIE-IN 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             ++  T++G  + + V+A   +
Sbjct: 356 SQQIALTEKGRVLANDVLAEFIL 378


>gi|76799344|ref|ZP_00781505.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae 18RS21]
 gi|76585305|gb|EAO61902.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus agalactiae 18RS21]
          Length = 376

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + ++Q+ + E +          + +++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIREFRSY----DITELRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I    +  +L  ++++  +++  E TIEANP  + V+  +  +K+ VNR+SL
Sbjct: 58  IGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLXVDKIEVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM      + +A
Sbjct: 118 GVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  + HLSLY L +E  T+F    + G L LP+E++  +++    S    +G   YEIS
Sbjct: 178 LSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK V + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPI----QHYLKGVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E LS  +  +E L +GLR +EG+S+  +E   G + +    +  + LQ  G ++  
Sbjct: 293 RLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKE- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               ++ T++G+ + D+V     V
Sbjct: 352 NNGFIQMTKKGLFLGDTVAEKFIV 375


>gi|288916977|ref|ZP_06411349.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EUN1f]
 gi|288351686|gb|EFC85891.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EUN1f]
          Length = 409

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 128/398 (32%), Positives = 195/398 (48%), Gaps = 20/398 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWM 62
           +  +   GS   GVYVH P+C  +C YCDFN++         + G  +F+ S  TE +  
Sbjct: 19  DAALATVGSRPFGVYVHVPYCAARCGYCDFNTYTPAELGAGGQGGAASFVDSIATEARLA 78

Query: 63  RQLTGP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R + G     ++++F GGGTP+L+   ++A +L  +   + ++ +VE+T EANP SV++ 
Sbjct: 79  RSVLGEGELPVATVFVGGGTPTLLPASDLAKVLRILDDTFGLAGDVEVTTEANPESVDLE 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R +G  RIS G+QS     L  L R H        +  AR   F ++S DLIY  
Sbjct: 139 ALEHLRASGFTRISFGMQSARPHVLAALDRQHTPGRVAEVVGWARQAGFEQLSLDLIYGA 198

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L+  +  A +H+S Y LT+E+GT   +  + G+L+ P +++  D Y   
Sbjct: 199 PGESEADWAASLEAVIELAPNHVSAYSLTVEEGTKLSRRVRRGELLEPDDDLLADRYLQA 258

Query: 240 QSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A GL  YEISN S   A    HNL YWR  D+ G+GPGAHS V      V     
Sbjct: 259 DEAFAAAGLSNYEISNWSRDRASWCRHNLGYWRGDDWWGLGPGAHSHVGG----VRWWNV 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +HP  +   V         +E L +  Q  E +M+G+RL EG+         GR      
Sbjct: 315 RHPTEYATRVGAGRSPAAAREVLDAAAQRVERVMLGVRLVEGLEAVALCDR-GR----AA 369

Query: 359 ERNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
              L   G I   ++   R+  T+RG  + D+V+  L 
Sbjct: 370 ADELAADGLILDRQLAAGRVALTRRGRLLADTVVRALL 407


>gi|78224718|ref|YP_386465.1| coproporphyrinogen III oxidase, anaerobic [Geobacter
           metallireducens GS-15]
 gi|78195973|gb|ABB33740.1| coproporphyrinogen III oxidase, anaerobic [Geobacter
           metallireducens GS-15]
          Length = 383

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 133/384 (34%), Positives = 198/384 (51%), Gaps = 7/384 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
            ++  +Y+H PFCV+KC YC F S      +    +    L EM+     L  P   +++
Sbjct: 2   DDTTALYIHIPFCVRKCLYCAFAS-TDEAPLAIGEYTALLLREMELRAAALASPLRATTL 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+EP  +  I+DG A+ + +  + EIT+EANP +V  ++  GYR AGVNR+S
Sbjct: 61  YLGGGTPSLLEPDLVGNIIDGAARLFWLDPSAEITLEANPGTVTADSLAGYRGAGVNRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS +++ L  LGR H A EA  A  LAR   F  +  DLI+ LP Q++  W  +L+ 
Sbjct: 121 LGVQSFDDRMLERLGRVHTAREAKDAFALARRAGFDNIGIDLIHGLPDQSLDHWRDQLRM 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A +    H+S Y LT+E+GT F ++   G L LP E+ A  ++  T  + +A G   YEI
Sbjct: 181 AAALRPGHISAYGLTVEEGTPFARLEDQGVLALPDEDDAAAMFEETAEVLAAAGYEQYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           +N +  G  S HN  YWR  +Y+G G GAHS ++     +         ++   +     
Sbjct: 241 ANFALPGRRSRHNQVYWRRWNYLGFGAGAHSFLREPFPGIRWRNPDDLGTYGCSLADGVL 300

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
              +   L+ E    E+L +GLR+ EGI    +    GR L              G + R
Sbjct: 301 PETDIALLAEEDAMAEWLFLGLRMLEGIEEARFREEFGRPLMEIHGTAIEGFCAAGLLVR 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               RLR T+RG+ + + V A   
Sbjct: 361 G-GGRLRLTRRGVILSNRVFAAFL 383


>gi|170718310|ref|YP_001785323.1| coproporphyrinogen III oxidase [Haemophilus somnus 2336]
 gi|168826439|gb|ACA31810.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Haemophilus somnus 2336]
          Length = 392

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 210/386 (54%), Gaps = 20/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  ++   LT+++            R + S
Sbjct: 16  PLSLYIHIPWCVQKCPYCDFNSHAQKGLIPETEYVTHLLTDLKQDLVRYHASIADRKLHS 75

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   Q+I  +L+ I +      N+EIT+E+NP + E + F GY +AGVNRI
Sbjct: 76  IFIGGGTPSLFSVQSIDYLLNQIKQLIPFEDNIEITLESNPVTAESDRFVGYAQAGVNRI 135

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS   + L+ LGR HNA EA +A+  A++      + DL++ LP Q++ Q   +LQ
Sbjct: 136 SIGIQSFNNEKLQRLGRAHNAVEAKSAVRFAQHSGLNSFNLDLMHGLPNQSLVQALDDLQ 195

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    HLS YQLTIE  T+F          LP E+   D++     + S  G   YE
Sbjct: 196 QAIALKPPHLSWYQLTIEPNTMFAYRPP----KLPDEDELWDIFEQGHQLLSKAGYQQYE 251

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKN 311
            S ++ +  +  HNLNYWR+GDY+ IG GAH ++     ++   S  KHP+ +++     
Sbjct: 252 TSAYAKVDFQCQHNLNYWRFGDYLAIGCGAHGKLSFADGQILRFSKTKHPKGYMR----- 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFI 368
           G  + E++ +   ++  EF M   RL E +  + +E+L G     +  + +  L++    
Sbjct: 307 GEYLYEEKNIPFSERPFEFFMNRFRLLEPMEKQQFELLTGLAQSAVQKQIDWALEKNYLS 366

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E       + T++G   L+ ++    
Sbjct: 367 ET--NRTWQITEQGKLFLNELLTEFL 390


>gi|218887462|ref|YP_002436783.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758416|gb|ACL09315.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 448

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 130/379 (34%), Positives = 197/379 (51%), Gaps = 11/379 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC F+S          +++++ L E+       G   ++SIFFGGGT
Sbjct: 3   LYIHVPFCRRKCRYCAFHSLEMGAATVVRDYVETLLRELALWGDRMGGVPVTSIFFGGGT 62

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQS 139
           PSL+  + I  ILD + K + V    EI++EANP S+   +  +   K GVNR+S+GVQ 
Sbjct: 63  PSLLPARTIGTILDRVGKAFAVQPGAEISMEANPESLTRPSELRTLLKVGVNRLSMGVQC 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  L  LGR H A EA+ A    R   F  +  DLI+ LP QT+ QW  +L+  +   
Sbjct: 123 LDDAMLHTLGRPHRAREALDAFRAVRAAGFQNVGMDLIWGLPGQTLRQWMQQLKEVVRLR 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y LT+E GT        G L LP E     ++     +    G   YEISN + 
Sbjct: 183 PDHLSCYGLTLEPGTPLEDDCATGRLDLPPERAQAAMFMDGAELLETEGYIHYEISNFAR 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G +  HNL YW   DY+G+GP A S +      +  +  +   +W + V +      E 
Sbjct: 243 MGFQCRHNLGYWEGEDYLGLGPSAASTLGG----LRWNNPEDHAAWTRQVDEGRVG-AEA 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L+ + +  E +M+ LR   G+ VK +  L GR+   + +R    L R+G + R++   
Sbjct: 298 ELLTPQTRVLELIMLRLRTARGLRVKAYRELTGRDFLRDHKRLVHLLHREGLL-RIRDGY 356

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ GM + +S++  L 
Sbjct: 357 LRLTRSGMLVSNSILERLF 375


>gi|255525330|ref|ZP_05392270.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           carboxidivorans P7]
 gi|296188198|ref|ZP_06856590.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium carboxidivorans P7]
 gi|255511002|gb|EET87302.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           carboxidivorans P7]
 gi|296047324|gb|EFG86766.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium carboxidivorans P7]
          Length = 383

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 200/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  + +Y+H PFC +KC YCDF S   +  +  + + ++  ++++   +    RSI +IF
Sbjct: 10  NKEVALYIHIPFCKQKCLYCDFPSFANKENLMLD-YSKALASDIESCSR----RSIKTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  +    I   I      + ++E T+E NP +      +  ++ GVNR+S+
Sbjct: 65  IGGGTPTYLTLEAWGNIKKAIDILKK-TKDLEFTVEGNPGTFTKEKLKFLKEMGVNRLSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q  +   L  LGR H   + I +  +ARNI F  ++ DL++ LP+Q M QW+  L + 
Sbjct: 124 GLQCWQNNILEKLGRIHTVQDFIKSYEMARNIGFQNINVDLMFGLPEQNMEQWQETLDKV 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  + +H+S Y L IE+GT FY M + G L+ P E +   +Y        + G   YEIS
Sbjct: 184 VELSPEHISCYSLIIEEGTPFYSMDQKGKLIFPEEEMERKMYRYGIKFLKSKGYRQYEIS 243

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G E  HNL YW   +YIG G GAHS +    +R   SI++    ++K VR+N + 
Sbjct: 244 NFSKPGKECKHNLVYWNLQEYIGCGSGAHSYIDNLRYRKNESIQE----YIKNVRENKNL 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERV 371
            ++K   S E   +EF+ MGLR   GIS+ ++      +   +     +     G I   
Sbjct: 300 KLDKHENSKEDNIEEFVFMGLRKISGISITEFNKRFDTDIYNIYPNVIKKYVDNGMI-IC 358

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   L  ++RG+ + +SV+ +  +
Sbjct: 359 EHDNLFLSERGIEVSNSVMCDFIL 382


>gi|312171179|emb|CBX79438.1| putative oxidase [Erwinia amylovora ATCC BAA-2158]
          Length = 378

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 210/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++     LT  R +S++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHKEYVQHLLNDLDIDLPLTSGREVSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLAPDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLEEALEDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPP----RLPDEDDLWDIFEQGHQLLCAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++       +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGAIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  ++   +  EF M   RL E     ++    G     +  + +  L +    E V+
Sbjct: 297 DKRYEVADAGKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSVRAQIDTALAKGYLTETVE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 357 --HWQVTEKGKLFLNSLL-ELFL 376


>gi|325694600|gb|EGD36509.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK150]
          Length = 376

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 201/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  +++      + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDLEKIAVLKDSLVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVFELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|327489652|gb|EGF21444.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1058]
          Length = 376

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 113/384 (29%), Positives = 197/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYNAYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y G+G GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGVGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  +G +   
Sbjct: 293 RVQEEVLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVAELTEKGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|260549185|ref|ZP_05823406.1| coproporphyrinogen III oxidase [Acinetobacter sp. RUH2624]
 gi|260407913|gb|EEX01385.1| coproporphyrinogen III oxidase [Acinetobacter sp. RUH2624]
          Length = 384

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 132/393 (33%), Positives = 210/393 (53%), Gaps = 16/393 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSSELEQIYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +  A + + +        N EIT+EANP ++E + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKLLLKFEDNCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKMAVEHGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW +GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSAHNLNYWEFGDYLAIGAGAHGKVTQSDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
           +L  V      + + E   +++   EF+M  LRL  G+    ++   G +LD   +   +
Sbjct: 296 YLAKVPAEHLQMKKIE---ADELPFEFMMNTLRLNNGVKADLYKQRTGLSLDDLNDVLTS 352

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ +  +     +RL CT++G   L+SV+    
Sbjct: 353 LRARKLLVE-DSTRLACTEQGHIFLNSVLEEFL 384


>gi|332654565|ref|ZP_08420308.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcaceae bacterium D16]
 gi|332516529|gb|EGJ46135.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcaceae bacterium D16]
          Length = 406

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 192/382 (50%), Gaps = 10/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ LG+Y+H PFC  KC YCDF S   R     + + ++ L+ ++    L     + +I+
Sbjct: 7   ADKLGIYIHIPFCRSKCDYCDFYSLAGRDD-RMDQYQKALLSHIKETAPLAQDFPVDTIY 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS    + +  +L  I K + V  + E+T+E NP SV+V   +  RKAGVNR+S+
Sbjct: 66  IGGGTPSYYGAKRLKELLGVIRKLYKVEKDAEVTVECNPDSVDVKALKILRKAGVNRLSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS     L  + R H   +   A   AR   F  +S DLIY LP QTM  W+  ++ A
Sbjct: 126 GMQSANACELERIHRIHTPQQVNEAATAARKAGFTNLSLDLIYGLPGQTMDSWKATVEHA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS    HLS Y L +E+GT        G++ LP ++   DLY  T       G   YEIS
Sbjct: 186 LSLIPQHLSCYGLKVEEGTPLAARVAQGEV-LPDDDQQADLYLWTVGRLERAGYPQYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G  S HNL YW    YIG GPGAHS      +    S  +  +++++ V + G  
Sbjct: 245 NFAKPGFASRHNLRYWLTQPYIGFGPGAHSDFGGRRY----SFVRDLDAYIQGVLQGGDI 300

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
           + E E +   ++  E+LM+ LR  +GI+ +++      +           + QG+ E+  
Sbjct: 301 IDESEIIPKRERCGEYLMLRLRTVQGINEQEYRSTYFMDFAPLQARLEQFRAQGWAEQTD 360

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R   T +G  + + +I +L 
Sbjct: 361 -GRWHFTPKGFLLSNQLIGDLL 381


>gi|34540292|ref|NP_904771.1| oxygen-independent coproporphyrinogen III oxidase [Porphyromonas
           gingivalis W83]
 gi|34396604|gb|AAQ65670.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Porphyromonas gingivalis W83]
          Length = 376

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 123/380 (32%), Positives = 194/380 (51%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S        +  +IQ+ + EM   R      +I +++FGGG
Sbjct: 3   GLYIHIPFCATRCSYCDFYSQT--NSALRSEYIQALIAEMSIRRAEVTD-TIGTLYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ PQ I  I++ + + ++ SS+ EIT+EANP  +  +  Q  R   +NRIS+G QS
Sbjct: 60  TPSLLSPQEIGRIIEQVYRLFSFSSDAEITLEANPDDLNTSYVQELRTLPINRISMGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L FL R HNA + + A+   RN     +S DLIY LP QT  +W+  +   L+ +
Sbjct: 120 FHDEDLHFLNRRHNARQVLEAVDTCRNAGLTNLSIDLIYGLPGQTPARWQENISAVLALS 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS Y L  E+GT   ++   G +    E V+++L+ + +   +  G   YEISN + 
Sbjct: 180 PPHLSAYHLIYEEGTPLTRLLHAGKVREVDEEVSLELFRMLREQLTGAGYEHYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G+GP AHS       R   S       ++  +   G  +  +
Sbjct: 240 SGYHSCHNSSYWQDTPYLGLGPSAHSF---DGRRTRRSNPSDIRRYIVSMAA-GKPLFTE 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L+   + +E +M  LR   G+S      L G+     C R      R G +      R
Sbjct: 296 EILTDNDRYNEVVMTRLRTACGLSPDQIGHLFGKESAERCIRTAAPFIRDGLLHEEADGR 355

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +R T++G+ + D +I+   +
Sbjct: 356 IRLTEKGIFLSDRIISEFFI 375


>gi|292487076|ref|YP_003529946.1| putative oxidase [Erwinia amylovora CFBP1430]
 gi|292900540|ref|YP_003539909.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291200388|emb|CBJ47516.1| putative oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291552493|emb|CBA19538.1| putative oxidase [Erwinia amylovora CFBP1430]
          Length = 378

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 210/383 (54%), Gaps = 17/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++     LT  R +S++F G
Sbjct: 6   ALSLYIHIPWCVQKCPYCDFNSHALKGEVPHKEYVQHLLNDLDIDLPLTSGREVSTLFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + + ++LDG+     ++ + EIT+EANP +VE + F GY++AG+NRIS+GV
Sbjct: 66  GGTPSLLSSEAMQMLLDGVRARLPLAPDAEITMEANPGAVEADRFSGYQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSPAKLQRLGRIHGPDEARRAAELAAGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS YQLTIE  TLF          LP E+   D++     +  A G   YE S +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFASRPP----RLPDEDDLWDIFEQGHQLLCAAGYQQYETSAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAV 315
           +  G    HNLNYWR+GDY+GIG GAH ++       +  S  +HP  ++      G+ +
Sbjct: 242 AKPGYRCEHNLNYWRFGDYLGIGCGAHGKLTQPDGAIIRTSKTRHPRGFMA-----GNYL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
            ++  ++   +  EF M   RL E     ++    G     +  + +  L +    E V+
Sbjct: 297 DKRYEVADAGKPFEFFMNRFRLLEAAPRAEYTRYTGLPEHSVRAQIDTALAKGYLTETVE 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T++G   L+S++  L +
Sbjct: 357 --HWQVTEKGKLFLNSLL-ELFL 376


>gi|220929399|ref|YP_002506308.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulolyticum H10]
 gi|219999727|gb|ACL76328.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulolyticum H10]
          Length = 380

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 120/379 (31%), Positives = 209/379 (55%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDFNS+  +     +N+ +S   E++  +       I++IF GGG
Sbjct: 8   GLYIHVPFCSSKCNYCDFNSYTGKIDHA-DNYFKSLKKEIELYKAELRHYIINTIFIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q I  IL+     + +S N EI+IE+NP ++     + Y+ AG+NRIS+G+Q+
Sbjct: 67  TPSVVNEQYILEILEKCRTEYNISENCEISIESNPGTLSNEKLKAYKNAGINRISIGLQA 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L++LGR H+  +   ++  A++  F  ++ D+I+ +P Q++  W+  L   +S  
Sbjct: 127 YQDKLLKYLGRCHSHKDFTESVKNAKSAGFENINGDIIFGIPGQSLGDWKETLDYLVSLG 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L IE+ T F +M + G LV   + +  ++Y+      + +GL  YEISN + 
Sbjct: 187 INHISAYSLKIEEETKFGRMEEQGSLVPVEDELDREMYHYAVDYLNENGLKQYEISNFAK 246

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW+  DY+G+G GAHS +K       ISI    E ++  + +    + EK
Sbjct: 247 EGYECKHNLIYWKCVDYLGLGAGAHSCLKNTRFSNQISI----EGYIDYLNRGEKPLYEK 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
             L    +  E++ +GLRL  G+S K++  L  RN+     +    L+ +  I ++    
Sbjct: 303 NPLEFTDKMSEYMFLGLRLTAGVSGKEFYELFNRNMFTMYKDIFARLENKSLI-KITGDT 361

Query: 376 LRCTQRGMTMLDSVIANLA 394
           ++ T+ G+ + + V     
Sbjct: 362 VKLTRLGLDLANQVFLEFV 380


>gi|152998330|ref|YP_001343165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Marinomonas sp. MWYL1]
 gi|150839254|gb|ABR73230.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Marinomonas sp. MWYL1]
          Length = 389

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 134/379 (35%), Positives = 212/379 (55%), Gaps = 21/379 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            L +Y+H P+CV+KCPYCDFNSH         K+ ++ ++   L ++         R I 
Sbjct: 7   PLSLYIHLPWCVRKCPYCDFNSHQADRFEDNGKLPEDAYLAQLLADLDADLPYVAGREIQ 66

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           + F GGGTPSL+       ++D + +    + N EIT+EANP + E   F+ +R+AG+NR
Sbjct: 67  TAFIGGGTPSLMSEDFYYHLMDALREKLVWADNAEITMEANPGTFEQEKFRHFRQAGINR 126

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G+QS +   L+ LGR HN  EAI A+  +R   F  ++ DL++ LP Q++     +L
Sbjct: 127 LSIGIQSFQPNLLKTLGRIHNREEAIHAVDKSRAAGFDNINLDLMHGLPDQSLEMALEDL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A+    +HLS YQLTIE  T FY+        LP +N    + +  Q++ + HG   Y
Sbjct: 187 SLAIELNPEHLSWYQLTIEPNTEFYRRPP----TLPEDNTLWGIQDAGQALLAKHGYAQY 242

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRK 310
           E+S +S    ++ HNLNYWR+GDYIGIG GAH ++ + + ++      +HP  +L  + +
Sbjct: 243 EVSANSKENRQAAHNLNYWRFGDYIGIGAGAHGKITLINGQIFRTRKTRHPNHYLNNLAE 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR----NLDIECERNLQRQG 366
              A+V KE +  E    EF+M  LRL E   +KD+E  A +    +L   CE  L +QG
Sbjct: 303 ---ALVIKEAIEQEDLPLEFMMNRLRLFETFDLKDYERFAYQKVPNSLVKACEIAL-KQG 358

Query: 367 FIERVQF--SRLRCTQRGM 383
            ++  ++   R++ T++G 
Sbjct: 359 LLDIDEWKKQRIKTTEKGK 377


>gi|23099426|ref|NP_692892.1| coproporphyrinogen III oxidase [Oceanobacillus iheyensis HTE831]
 gi|22777655|dbj|BAC13927.1| coproporphyrinogen oxidase III (oxygen-independent) [Oceanobacillus
           iheyensis HTE831]
          Length = 391

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 120/379 (31%), Positives = 189/379 (49%), Gaps = 11/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC + C YC+F  +    +   +++I++ + E+     +     + +I+ GGG
Sbjct: 6   AVYIHIPFCKQICHYCNFVKYFYM-ENKADDYIEALIHEIDCTV-IGYNVHVDTIYMGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  Q +  + + + + + + S  E TIE NP  ++    Q     GVNR+S GVQ 
Sbjct: 64  TPTALNIQQLKKLFNFLGRKFNLESCKEFTIEINPGDIDHEKAQLLSSYGVNRVSFGVQV 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++  LR +GR H   +    + L     F  +S DLIYALP QT+  +E  L  AL + 
Sbjct: 124 MDDDMLRKIGRMHCVKDVYETVDLLTKNDFRNISLDLIYALPNQTVEHFEKTLHDALQFG 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+F+     G L  P E+  V++Y + Q      G+  YEISN + 
Sbjct: 184 LPHYSTYALQIEPKTVFFHKQNKGQLQRPPEDAEVEMYRILQHEMKKRGIRQYEISNFAK 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW    Y G G GAH  +         S  K   ++++  ++ G A+ E 
Sbjct: 244 PGYESKHNLTYWNNDYYYGFGAGAHGYIPGKR----TSNSKPLGTYMRAAKEEGSAIDEI 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E ++ + Q +E L + LR   GI  K +E   G +L+   E+ LQ    QG +  +  + 
Sbjct: 300 EEITKKDQIEEELFLQLRKTSGIDKKMFEQKYGVSLEQLYEKELQDLLEQGLLRLIDGNY 359

Query: 376 LRCTQRGMTMLDSVIANLA 394
            R T RGM + D V +   
Sbjct: 360 -RLTDRGMLLGDQVFSKFL 377


>gi|290580209|ref|YP_003484601.1| putative coproporphyrinogen III oxidase [Streptococcus mutans
           NN2025]
 gi|254997108|dbj|BAH87709.1| putative coproporphyrinogen III oxidase [Streptococcus mutans
           NN2025]
          Length = 380

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 206/385 (53%), Gaps = 13/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E     Q+   + + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLEALIKEFNDYYQI---KDLQTL 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L  ++KN  ++   E TIEANP  +  +     +++ VNR+S
Sbjct: 58  YIGGGTPTAISGEQLDYLLTNLSKNLNLNMLEEFTIEANPGDLTPDKVAVLKQSAVNRVS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR HN ++   +I  L    F  +S DLIYALP QT+T  +  + +
Sbjct: 118 LGVQTFNNKHLKQIGRGHNEAQIYESIDSLKSAGFDNISIDLIYALPNQTITDVKENVAK 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  ++++   S    HG   YEI
Sbjct: 178 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIISEMEDHGFEHYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +    ES HNL YW   +Y G G GA   V    +R    I    + +LK +++ G 
Sbjct: 238 SNFTKPDFESRHNLMYWNNAEYFGCGAGASGYVDGIRYRNRGPI----QHYLKAIKEKGQ 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           A  ++E LS  ++ +E L +GLR + GIS++ +E   G  L     +   +L++ G I  
Sbjct: 294 ARFQEERLSQAEKMEEELFLGLRKKSGISIQRFENKFGLPLMEVYGQAIDDLEKDGLI-L 352

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           V+   +R +++G+ + D+V     +
Sbjct: 353 VEKDCIRMSKKGLFLGDTVAEKFIL 377


>gi|312876834|ref|ZP_07736811.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796349|gb|EFR12701.1| oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 375

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 203/381 (53%), Gaps = 10/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC KKC YCDF S+          +  +   E+ + ++      I +I+ 
Sbjct: 2   RNIGLYIHVPFCKKKCYYCDFVSYENVDDDMVFAYFSALKNELIFYKE-NYEIEIDTIYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + I  +L+ I  N+ V S  EI+IEANP S+     + YR+AG+NR+S+G
Sbjct: 61  GGGTPSFVPAKYILKLLEFIYSNFKVKSTCEISIEANPESITKEKLKSYREAGINRLSVG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  +R +GR H++  A+  +      F   S D+I  LP QT   +   L   L 
Sbjct: 121 IQSLNDAEVRAIGRIHDSEVALKILSRVPLYFENFSVDVIIGLPYQTFESFSQTLNTLLK 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++  HLS+Y L IE+GT  ++ +++   +LPSE+    ++   +   S  GL+ YEISN 
Sbjct: 181 FSPPHLSIYSLKIEEGTPLFERYEEYKSLLPSEDEERRMFWWARDRLSEVGLYHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HNL YW   +YIG+G  AHS  +   +    +I    + +   +++NG AV 
Sbjct: 241 AKKDFECKHNLKYWNCDEYIGVGCAAHSFFEDCRYYNTSNI----KEYTNKIKENGLAVE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
            KE +SSE+   EF+++GLR  EG S+ ++        + +       L++ G I+    
Sbjct: 297 GKELISSEESEKEFIILGLRKIEGFSLDEFRERFAIEFERKYKSQIEKLKKYGLIDI--N 354

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            R++ T+RG+ + + V     
Sbjct: 355 GRIKLTERGIDLANLVWQEFV 375


>gi|328946163|gb|EGG40308.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1087]
          Length = 376

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 200/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEYLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       +++ VNR+SL
Sbjct: 58  IGGGTPTALSVSQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKESPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H+  +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHSEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGIRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEALTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + +R T++G+ + D+V     +
Sbjct: 352 DRNIVRMTKQGLFLGDTVAEKFIL 375


>gi|210623842|ref|ZP_03294091.1| hypothetical protein CLOHIR_02042 [Clostridium hiranonis DSM 13275]
 gi|210153337|gb|EEA84343.1| hypothetical protein CLOHIR_02042 [Clostridium hiranonis DSM 13275]
          Length = 376

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 208/380 (54%), Gaps = 10/380 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+H PFCVKKC YCDFNS  +     ++ ++     E++        R + +IFFGG
Sbjct: 2   FGVYIHIPFCVKKCKYCDFNSF-KMNLCDKKRYLDDLKKEIKMYSGECADRIVDTIFFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    I  ++  +  ++ +S + EIT+E NP +++    +  +++G+NR+S+G+Q
Sbjct: 61  GTPSILSCDEIESLMKCVKDSFNISDDTEITMECNPGTIDRKKLETIKRSGINRLSIGLQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++   L ++GR H   E       AR+  F  ++ DL++ALP QT   W+  L++ +  
Sbjct: 121 AVQNHHLSYIGRIHTYEEFEKNFKEARSVGFDNINIDLMFALPNQTEDDWKESLEKVVGL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L +E+GT  + M++  +  L  E+  +++Y  T +    +G + YEISN+S
Sbjct: 181 NPEHISAYSLIMEEGTELFDMYEREEFELMDEDRDIEMYEYTINYLKNNGYNQYEISNYS 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HN+ YW+  +Y+G+G GA   +    +    + E +  S+ K +      ++ 
Sbjct: 241 KEGKECRHNIIYWQCDNYLGLGAGAAGYLARDRY----TNESNLNSYHKKIESGKKPIIS 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFS 374
            E LS E+  +E + MGLR+  GI+  D++   G     + ++   +L  +G +  V+ +
Sbjct: 297 VENLSDEEMMEEMVFMGLRMNSGINRIDFKNRFGVEFCDKYKKQVEDLAERGLLSVVEEN 356

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            ++ TQ+G  + +SV   + 
Sbjct: 357 -IKLTQKGREISNSVFLEIL 375


>gi|322385638|ref|ZP_08059282.1| coproporphyrinogen dehydrogenase [Streptococcus cristatus ATCC
           51100]
 gi|321270376|gb|EFX53292.1| coproporphyrinogen dehydrogenase [Streptococcus cristatus ATCC
           51100]
          Length = 376

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    S     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIISELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVSELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DKDIVRMTKQGLFLGDTVAEKFIL 375


>gi|262382389|ref|ZP_06075526.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_33B]
 gi|262295267|gb|EEY83198.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_33B]
          Length = 375

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 125/379 (32%), Positives = 202/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S+       +E +I + + EM+  +   G  ++ +I+FGGG
Sbjct: 3   GLYIHVPFCAKRCLYCDFFSNT--EMKYKEPYINALIKEMELRKGYIGNEALETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I + I +++ V+   EIT+EANP  ++       R    NR+S+GVQS
Sbjct: 61  TPSQLDEKDFGKIFEAIYRHFDVAEQAEITLEANPDDMKREYVSLLRNYPFNRVSMGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+   
Sbjct: 121 FHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTQQAWEENLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y L  E+GT  YK+ + G +   +E ++V  ++      +  G   YEISN + 
Sbjct: 181 VPHLSAYHLIYEEGTALYKLLEAGKVTPINEELSVSFFSTLIDRLAEAGYLHYEISNFAR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+GP AHS   +       S+  + +       +NGH  +E 
Sbjct: 241 PGFFSKHNSSYWTGKKYLGLGPSAHSYNGIDREWNPSSLPIYIDGI-----ENGHPTIES 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + +    +
Sbjct: 296 EDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT-GDK 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  ++ G+ + D ++++L 
Sbjct: 355 LILSKSGIFVSDGIMSDLL 373


>gi|301308407|ref|ZP_07214361.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 20_3]
 gi|300833877|gb|EFK64493.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 20_3]
          Length = 385

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 125/379 (32%), Positives = 203/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S+       +E +I + + EM+  +   G  ++ +I+FGGG
Sbjct: 13  GLYIHVPFCAKRCLYCDFFSNT--EMKYKEPYINALIKEMELRKGYIGNEALETIYFGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I + I +++ V+  +EIT+EANP  ++       R    NR+S+GVQS
Sbjct: 71  TPSQLDEKDFGKIFEAIYRHFDVAEQMEITLEANPDDMKREYVSLLRNYPFNRVSMGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+   
Sbjct: 131 FHPEDLRFLNRRHDREQAIKAVELCKEYGITNISIDLIYGLPNQTQQAWEENLRQAIRLD 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y L  E+GT  YK+ + G +   +E ++V  ++      +  G   YEISN + 
Sbjct: 191 VPHLSAYHLIYEEGTALYKLLEAGKVTPINEELSVSFFSTLIDRLAEAGYLHYEISNFAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+GP AHS   +       S+  + +       +NGH  +E 
Sbjct: 251 PGFFSKHNSSYWTGKKYLGLGPSAHSYNGIDREWNPSSLPIYIDGI-----ENGHPTIES 305

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + +    +
Sbjct: 306 EDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQT-GDK 364

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  ++ G+ + D ++++L 
Sbjct: 365 LILSKSGIFVSDGIMSDLL 383


>gi|315604665|ref|ZP_07879728.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313677|gb|EFU61731.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 430

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 126/405 (31%), Positives = 186/405 (45%), Gaps = 31/405 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGP-----R 69
             L +YVH PFC  +C YCDFN++   +  G +  ++  S L E +   ++        R
Sbjct: 28  RPLSLYVHVPFCRVRCGYCDFNTYTVGFGPGAQVGDYAPSVLAEARLATRVMADAGMKAR 87

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++FFGGGTP+++    +  IL G+ +   ++ + E+T+EANP SV  +  +    AG
Sbjct: 88  RAQTVFFGGGTPTMLATAELIEILRGLDEAVGIAKDAEVTLEANPDSVTRSGLRELAHAG 147

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S G+QS     LR L R H  +     +  A+      S DLIY  P + +T WE 
Sbjct: 148 FTRVSFGMQSAVPSVLRTLDRTHAPNRVPLVVEWAKEAGLSTSLDLIYGTPGEGLTDWET 207

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ ALSY  DH+S Y L +E+GT   +    G+L  P  +     Y L   +    G  
Sbjct: 208 SLRCALSYRPDHISAYALVVEEGTKMGRQVARGELPTPDPDDEAAKYELADELLGEAGYA 267

Query: 250 AYEISNHSFLG--------------AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
            YEISN + +                 S HNL YWR  D+ G+GPGAHS V     R   
Sbjct: 268 WYEISNFARVTEGDRSPVRAPTSYVHASRHNLAYWRDWDWWGLGPGAHSHVG----RARW 323

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA----G 351
              K+P ++   VR+        E LS E +  E +M+G+R  EGI++    ++A    G
Sbjct: 324 WNVKNPAAYAARVREGVSPAFAGEILSDETRELERVMLGVRTAEGIALDSLPVVADGEGG 383

Query: 352 RNLDIECERNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
                     L   G I+       R+  T RG  + D V   L 
Sbjct: 384 EVASGVRVEALVADGLIDGGEAAKGRVVLTLRGRLLADYVTRELM 428


>gi|328882386|emb|CCA55625.1| putative coproporphyrinogen III oxidase [Streptomyces venezuelae
           ATCC 10712]
          Length = 410

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 118/396 (29%), Positives = 190/396 (47%), Gaps = 18/396 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G G   LG Y+H P+C  +C YCDFN++      G       ++N+ +    E++  
Sbjct: 21  ALEGAGERPLGFYLHVPYCATRCGYCDFNTYTANELRGTGGVLASRDNYAEQVTEEIRLA 80

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  +   + ++ + E+T EANP SV   
Sbjct: 81  RKVLGDDPRPVRTVFVGGGTPTLLAAGDLVRMLAAVRDEFGLADDAEVTTEANPESVNPA 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NRIS G+QS ++  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 141 YLAELREGGFNRISFGMQSAKQHVLKILDRTHTPGRPEACVAEARAAGFEHVNLDLIYGT 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 201 PGETDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 260

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           + + S  G   YE+SN +       LHN  YWR  D+ G GPGAHS +      V     
Sbjct: 261 EDVLSRSGFDWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHMGG----VRWWNV 316

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   +         +E LS E +  E +++ LRL+EG+ +   +           
Sbjct: 317 KHPGAYAAALAGGKSPGAGRELLSDEDRRVERILLELRLKEGVELSLLKPAGLAAAAKAL 376

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              L   G     +  R   T RG  + D+V+ +L 
Sbjct: 377 TDGLLAPG---PYETGRAVLTLRGRLLADAVVRDLV 409


>gi|222153229|ref|YP_002562406.1| coproporphyrinogen III oxidase [Streptococcus uberis 0140J]
 gi|222114042|emb|CAR42401.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus uberis 0140J]
          Length = 376

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 206/384 (53%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   ++++++ + E +        +S+ +++
Sbjct: 3   NKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIQEFRSY----EIKSLKTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I    +  +L  + ++  +S   E TIEANP  ++ +  Q  +K+ VNRISL
Sbjct: 58  IGGGTPTAITASQLDYLLTELVRDLDLSKLEEFTIEANPGDLDQDKIQVLKKSAVNRISL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++    I  L    F  +S DLIYALP QT+ Q +  + +A
Sbjct: 118 GVQTFNDKHLKQIGRSHNEAQIYTTIDSLKAAGFHNISIDLIYALPGQTLEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEIS
Sbjct: 178 LALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G  S HNL YW   +Y G G GA   +    +R  + I    + +LK V + G+A
Sbjct: 238 NFSKPGYYSQHNLMYWDNDEYYGCGAGASGYLNGVRYRNRVPI----QHYLKAVSE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            + +E L+ ++  +E L +GLR + G+SV  +E   G + D       + L  QG +   
Sbjct: 293 RLTEEVLTQDEMIEEELFLGLRKKSGVSVARFEEKFGLSFDQRYGHIVQELIGQGLLVN- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + DSV     +
Sbjct: 352 DPKTVRMTKKGLFLGDSVAEKFIL 375


>gi|75908440|ref|YP_322736.1| coproporphyrinogen III oxidase [Anabaena variabilis ATCC 29413]
 gi|75702165|gb|ABA21841.1| coproporphyrinogen III oxidase, anaerobic [Anabaena variabilis ATCC
           29413]
          Length = 396

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 135/386 (34%), Positives = 203/386 (52%), Gaps = 16/386 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF   V   +   E       ++ +   E+        P  + +
Sbjct: 12  SAYVHIPFCRRRCFYCDFPIFVVGDRQRGETSVTISGYVDTLCEEIAITPVFGQP--LQT 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+    +A IL  + K + +  + EI++E +P + ++ + QGYR  GVNR+
Sbjct: 70  IFFGGGTPSLLSTAQLAQILGTLDKRFGIVPDAEISMEIDPGTFDLAHIQGYRSVGVNRV 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +E+ L+  GR+H+  +  AAI L   +  P  S DLI  LP Q++ QW+  L+
Sbjct: 130 SLGVQAFQEELLKLAGRSHSLKDIFAAIDLIHQVEIPEFSIDLISGLPHQSLDQWQDSLE 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++ A  H+S+Y LTIE GT F + +K GD  LP++   V +Y + Q I +  G   YE
Sbjct: 190 TAVNIAPTHISIYDLTIEPGTAFGRYYKPGDNPLPTDETTVKMYQMGQRILTDGGYEHYE 249

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y G G GA S V+ G         K    W++ +  N 
Sbjct: 250 ISNYAKPGHQCRHNRVYWENCPYYGFGMGAASYVE-GKRFTRPRKTKEYSQWVQELIAN- 307

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIE 369
           H V++ E         E LM+GLRL +G+S+       G+    E  + LQ    QG+++
Sbjct: 308 HGVIDWEITPKADVLLETLMLGLRLADGVSLAALTEEFGKEKIQELHQCLQPYFTQGWVQ 367

Query: 370 RVQFSRLRCT-QRGMTMLDSVIANLA 394
            V   RLR +   G    + V+A+L 
Sbjct: 368 VV-GDRLRLSDPDGFLFSNVVLADLF 392


>gi|296119872|ref|ZP_06838426.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295967026|gb|EFG80297.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 395

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 186/385 (48%), Gaps = 17/385 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY----KVGQENFIQSFLTEMQWMRQLTGPRSI 71
           ++S G+Y+H PFC  +C YCDFN++              ++ +   E++   +    R  
Sbjct: 19  TDSFGLYIHVPFCATRCGYCDFNTYTPGELGSPHDLTGPYLNALERELEKAAEKV-NRPA 77

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +IF GGGTPSL+  + +  +L+    ++ +S + EIT E+NP S     F+  ++AG  
Sbjct: 78  DTIFVGGGTPSLLGGEGLTRVLNAARNSFGISPDAEITTESNPESTSPEFFEQIKEAGFT 137

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS     L+ L R H      AA   A+   F  ++ D+IYA P +T       
Sbjct: 138 RVSLGMQSAASHVLQILERAHTPGRPFAAAREAKAAGFEHVNLDMIYATPTETDDDVRRT 197

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  AL   VDH+S Y L +E GT   +  K G+L  P ++     Y +  S     G   
Sbjct: 198 LDLALETGVDHISAYSLIVEDGTRMARKVKKGELPAPDQDTMAKRYEIIASRLDDAGFGW 257

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G E  HN+ YWR  ++ G GPGAHS +            K P  ++KM+  
Sbjct: 258 YEVSNWAKEGGECRHNMIYWRDQEWWGAGPGAHSHIGNERFYNV----KLPGRYIKMLGD 313

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
           +   + + E L+  +   E +M+GLRLREGI           +       +   +G +  
Sbjct: 314 DELPIADSETLTESENHMEKIMLGLRLREGIDRSLL-----LDAAQPMVDSFIDRGLL-- 366

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           V   RLR T+ G  + D +I +L +
Sbjct: 367 VDDGRLRVTKAGRLLADGIITDLLL 391


>gi|226307231|ref|YP_002767191.1| coproporphyrinogen III oxidase [Rhodococcus erythropolis PR4]
 gi|226186348|dbj|BAH34452.1| coproporphyrinogen III oxidase [Rhodococcus erythropolis PR4]
          Length = 408

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 118/397 (29%), Positives = 183/397 (46%), Gaps = 20/397 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQ 64
             ++ G G    G+Y+H PFC  +C YCDFN++           +++++    E+    +
Sbjct: 21  ARSLEGVGKRPFGIYIHVPFCATRCGYCDFNTYTAGELGTSASPQSWLEGLRRELDLAAE 80

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +TG  +  ++F GGGTPSL+    ++ +L  +  ++ ++S  E+T E+NP S     F  
Sbjct: 81  MTGAPAAKTVFVGGGTPSLLGGDGLSDVLSAVRSSFGLASGAEVTTESNPESTSPEFFDA 140

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQT 183
            R AG  RISLG+QS  +  L+ L R H       AA       F  ++ DLIY  P + 
Sbjct: 141 LRSAGFTRISLGMQSAAQHVLKILDRTHTPGRAVAAAKEARAAGFSHVNLDLIYGTPGER 200

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               +  L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    S  
Sbjct: 201 DQDLDASLDAVLSADVDHVSAYALIVEDGTAMARKVRRGELPAPDDDVLASRYERIDSRL 260

Query: 244 SAHGLHAYEISNHSFL------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
           S  GLH YE+SN +             HNL YW  GD+ G GPGAHS V      V    
Sbjct: 261 SEAGLHWYEVSNWAKAETADSGDTRCRHNLGYWDGGDWWGAGPGAHSHVGG----VRWWN 316

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KHP  + + +      V   E L++E +  E +M+  RLR G+ + +       + +  
Sbjct: 317 VKHPARYAEQLALGELPVGGSEDLTAEDEHMERVMLTARLRTGLPLSELSASERLSAEQV 376

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               L        ++   +  T RG  + D+VI  + 
Sbjct: 377 VVDGLA------VIENDHVVLTDRGRLLADAVIRTIL 407


>gi|167854727|ref|ZP_02477506.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus parasuis 29755]
 gi|167854141|gb|EDS25376.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Haemophilus parasuis 29755]
          Length = 387

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 131/400 (32%), Positives = 203/400 (50%), Gaps = 31/400 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLT 66
           M       L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L +++      +   
Sbjct: 1   MVNLMQPPLSLYIHIPWCVQKCPYCDFNSHAQKGIIPEQEYIQHLLNDLEQDLISYKTAI 60

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R I SIF GGGTPSL   + I  +L  I K    S   EIT+EANP + E   F GY 
Sbjct: 61  ADRKIHSIFIGGGTPSLFSAEGIHYLLAEIRKRIDFSHECEITLEANPGTAEAERFIGYV 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN----IFPRMSFDLIYALPKQ 182
           + GVNRIS+G+QS E + L  LGR H+++EA  A+  A++         + DL++ LP Q
Sbjct: 121 QGGVNRISMGIQSFEPEKLLKLGRIHDSNEAKQAVRFAQHSARVGLRSFNIDLMHGLPNQ 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++TQ   +L++ ++    HLS YQLTIE  T+FY         LP ++   D++     +
Sbjct: 181 SVTQALDDLRQGIALNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQL 236

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHP 301
            +  G   YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP
Sbjct: 237 LTDAGYEQYETSAYAKKGYQCQHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHP 296

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------L 354
           + +++     G     +E + ++ +  EF M   RL E     ++E   G +       +
Sbjct: 297 KGYMR-----GEYRYHQEMIENDDRPFEFFMNRFRLLEATPKTEFEAYTGLDRTQVQATM 351

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           D    RN   +           + TQ G   L+ ++    
Sbjct: 352 DWALSRNFISE------SNEYWQITQHGKLFLNELLEGFL 385


>gi|294501306|ref|YP_003565006.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium QM B1551]
 gi|294351243|gb|ADE71572.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium QM B1551]
          Length = 379

 Score =  345 bits (885), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 187/379 (49%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +     +++S   EM+   +     ++++IF GGG
Sbjct: 4   AAYLHIPFCHHICHYCDFNKVFFKNQ-PVMPYLESMREEMKQAVEHYPTTNLNTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ ++ Q +   L+ I          E T EANP+ +     Q     GVNR+S+GVQ+
Sbjct: 63  TPTALDEQQLEYFLESIRMYLPYDEKGEFTFEANPNELTKEKLQLLHDYGVNRLSIGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L  +GR H+  +    +  AR I    +S DLIY+LP+QT+  +   LQ A S  
Sbjct: 123 FNERLLEKIGRVHSNRQVFDCVEQARKIGMSNISLDLIYSLPEQTVADFSSTLQTAFSLE 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L IE  T+FY +   G L LP++     +Y L        G H YEISN + 
Sbjct: 183 VEHMSAYSLIIEPKTVFYNLMNKGKLPLPAQEEEAAMYELLMKEMDKQGFHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HNL YW   DY GIG GAHS +          ++K    ++  V + G+A + +
Sbjct: 243 PGYESIHNLTYWNNDDYYGIGAGAHSYIDGIRRANIGPLKK----YIDSVEQKGNAYLNE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             ++  ++ +E + +GLR  +G+S ++++    R L       +Q    +G +     S 
Sbjct: 299 VSVTEAEKMEEEMFLGLRKTKGVSKEEFKKKFNRELKDVFGEPIQEYKEKGLLGE-DNSS 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T  G  + + V     
Sbjct: 358 VFLTHNGRFLGNEVFQAFI 376


>gi|110835441|ref|YP_694300.1| coproporphyrinogen oxidase [Alcanivorax borkumensis SK2]
 gi|110648552|emb|CAL18028.1| coproporphyrinogen oxidase [Alcanivorax borkumensis SK2]
          Length = 394

 Score =  345 bits (885), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 140/386 (36%), Positives = 211/386 (54%), Gaps = 14/386 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +  L +Y+H P+CV+KCPYCDFNSH  R ++ +  ++Q+ LT+++    L G R++ ++
Sbjct: 15  KNPPLSLYIHTPWCVRKCPYCDFNSH-ERGEIPEAAYLQALLTDLEQDLPLIGERTVETV 73

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+       +  GI +   +  NVEIT+EANP ++E   FQG+R+AG+NR+S
Sbjct: 74  FIGGGTPSLLSADFYQQLFHGIRQRLALHPNVEITLEANPGTLENGRFQGFREAGINRLS 133

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS     L+ LGR HNAS AI A H AR   F   + D+++ALP QT  Q   +LQ+
Sbjct: 134 IGAQSFNNAHLQALGRIHNASAAINAAHQAREAGFDNFNLDIMHALPGQTHAQALDDLQQ 193

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    HLS Y+LTIE  T+FY+         P  +   D      ++ + HG   YEI
Sbjct: 194 AIALQPTHLSWYELTIEPNTVFYRSPPVQ----PDSDTMADTEQAGFALLAEHGYLRYEI 249

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKN 311
           S  +  G    HNLNYW++GDY+GIG GAH ++   +          + PE +L      
Sbjct: 250 SAFAQPGRPCRHNLNYWQFGDYLGIGAGAHGKITAAAQGDVHRYQKTRKPEDYLADAA-- 307

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIE 369
            HA  + + ++ E +  E L+ GLRL  G+  +  E   G  +          ++QG + 
Sbjct: 308 -HARRQHQPIAREDRLFEALLNGLRLTHGLCWQTLEDATGEPVAQWRHQLTPFEQQGLLT 366

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
                RL CT  G+  L+ ++  LA 
Sbjct: 367 LTD-QRLACTDNGLRHLNGLLEKLAA 391


>gi|24379821|ref|NP_721776.1| coproporphyrinogen III oxidase [Streptococcus mutans UA159]
 gi|24377790|gb|AAN59082.1|AE014974_12 putative coproporphyrinogen III oxidase [Streptococcus mutans
           UA159]
          Length = 380

 Score =  345 bits (885), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 206/385 (53%), Gaps = 13/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E     Q+   + + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLEALIKEFNDYYQI---KDLQTL 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L  ++KN  ++   E TIEANP  +  +     +++ VNR+S
Sbjct: 58  YIGGGTPTAISGEQLDYLLTNLSKNLNLNMLEEFTIEANPGDLTPDKVAVLKQSAVNRVS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR HN ++   +I  L    F  +S DLIYALP QT+T  +  + +
Sbjct: 118 LGVQTFNNKHLKQIGRGHNEAQIYESIDSLKSAGFDNISIDLIYALPNQTITDVKENVAK 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  ++++   S    HG   YEI
Sbjct: 178 ALALDIPHLSLYNLILEHHTVFMNKMRRGKLNLPAEDLEAEMFDYIISEMEDHGFEHYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   V    +R    I    + +LK +++   
Sbjct: 238 SNFTKPGFESRHNLMYWNNAEYFGCGAGASGYVDGIRYRNRGPI----QHYLKAIKEKRQ 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           A  ++E LS  ++ +E L +GLR + GIS++ +E   G  L     +   +L++ G I  
Sbjct: 294 ARFQEERLSQSEKMEEELFLGLRKKSGISIQRFEDKFGLPLMEVYGQAIDDLEKDGLI-L 352

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           V+   +R +++G+ + D+V     +
Sbjct: 353 VEKDCIRMSKKGLFLGDTVAEKFIL 377


>gi|295706653|ref|YP_003599728.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium DSM 319]
 gi|294804312|gb|ADF41378.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           megaterium DSM 319]
          Length = 379

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 119/379 (31%), Positives = 188/379 (49%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN    + +     +++S   EM+   +     ++++IF GGG
Sbjct: 4   AAYLHIPFCHHICHYCDFNKVFFKNQ-PVMPYLESMREEMKQTVERYPTTNLNTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ ++ Q +   L+ I          E T EANP+ +     Q     GVNR+S+GVQ+
Sbjct: 63  TPTALDEQQLEYFLESIRMYLPYDEKGEFTFEANPNELTKEKLQLLHDYGVNRLSVGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L  +GR H+  +    +  AR I    +S DLIY+LP+QT+  +   LQ A S  
Sbjct: 123 FNERLLEKIGRVHSNRQVFECVEQARKIGMSNISLDLIYSLPEQTVADFSSTLQTAFSLE 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L IE  T+FY +   G L LP++     +Y L        G H YEISN + 
Sbjct: 183 VEHMSAYSLIIEPKTVFYNLMNKGKLPLPAQEEEAAMYELLMKEMDKQGFHQYEISNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HNL YW   DY GIG GAHS +          ++K    ++  V +NG+A + +
Sbjct: 243 TGYESIHNLTYWNNDDYYGIGAGAHSYIDGIRRANIGPLKK----YIDSVEQNGNAYLNE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             ++  ++ +E + +GLR  +G+S ++++    R L       +Q    +G +     S 
Sbjct: 299 VSVTEAEKMEEEMFLGLRKTKGVSKEEFKKKFNRELKDVFGEPIQEYKEKGLLGE-DNSS 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T  G  + + V     
Sbjct: 358 VFLTHNGRFLGNEVFQAFI 376


>gi|330831107|ref|YP_004394059.1| Coproporphyrinogen III oxidase [Aeromonas veronii B565]
 gi|328806243|gb|AEB51442.1| Coproporphyrinogen III oxidase, anaerobic [Aeromonas veronii B565]
          Length = 381

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 135/382 (35%), Positives = 208/382 (54%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++    ++ + L ++    +    R +SSIF G
Sbjct: 6   PLSLYIHVPWCVQKCPYCDFNSHAQKGELPHLEYVAALLEDLDQDLKWAQGRPLSSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     +++  EIT+EANP +VE   F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLTVEAMQTLLDGVRARIPLAAECEITMEANPGTVEAEKFAGFQRAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H   EA  A  LA  I  P  + DL++ LP Q++     +LQ+A+ 
Sbjct: 126 QSFQQEKLTRLGRIHGPEEARKAAALAHAIKLPTFNLDLMHGLPDQSLDDALYDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F          LP ++   D+Y    ++ +A G   YEIS +
Sbjct: 186 CAPPHLSWYQLTIEPNTAFASKPP----KLPEDDTLWDIYEQGHAMLTASGYRQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH +V        +  +  KHP+ +L    K+   
Sbjct: 242 AKEGYQCHHNLNYWRFGDYLGIGCGAHGKVTDLANQQILRTAKVKHPKGYLD---KSRPY 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           + E+  ++++    E+ M   RL E     ++E   G  L+         Q +  IE + 
Sbjct: 299 LDEQWQVTADDLPLEYFMNRFRLFEPAPKAEFEAYTGLPLERVETVLTIAQSKELIEDL- 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T  G   L+ V+  L 
Sbjct: 358 GESWQLTSLGHRYLN-VLLELF 378


>gi|300741545|ref|ZP_07071566.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           dentocariosa M567]
 gi|300380730|gb|EFJ77292.1| putative oxygen-independent coproporphyrinogen III oxidase [Rothia
           dentocariosa M567]
          Length = 423

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 119/401 (29%), Positives = 188/401 (46%), Gaps = 22/401 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTG- 67
            G  +    +YVH PFC  +C YCDFN++        +G   +      E+ +  +    
Sbjct: 23  HGCQNRDFSLYVHIPFCSVRCGYCDFNTYATEDFGDGIGLGTYADDATAEIFFAARTLEA 82

Query: 68  ----PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R + ++FFGGGTP+ +   ++  IL      + +    E+T EANP SV   + Q
Sbjct: 83  SGVVKRPLHTVFFGGGTPTKLPAYDLVRILKTAIDIFGIEDGAEVTTEANPDSVTYEDLQ 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             +  G  R+S G+QS+  + L+ L R H        +  AR+I  ++S DLIY  P +T
Sbjct: 143 TLKDGGFTRVSFGMQSVVPEVLKVLDRTHTPENVPKVVAWARDIGLQVSIDLIYGSPSET 202

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + QWE  +Q A+SY  DH+S Y L +E GT      + G+  +P +++  D+Y   + + 
Sbjct: 203 LEQWEQSVQAAISYQPDHISAYSLIVEDGTKLAAQIRRGEYTMPDDDLMADMYLRAEDLL 262

Query: 244 SAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
              G   YE+SN+S      S HN+ YWR  D+ GIGPGAHS +            KHP 
Sbjct: 263 MQAGYRWYEVSNYSRSEHTRSDHNMAYWRNQDWWGIGPGAHSHINGTR----WWNIKHPV 318

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            +   VR        +E L S  ++ E +M+ +R+REG+ + +   +          R L
Sbjct: 319 PYAHRVRAGESPAAAREVLDSGTRSFETIMLLIRVREGLPMHELLAVHPAADLGSSLRWL 378

Query: 363 QRQGFIERV---------QFSRLRCTQRGMTMLDSVIANLA 394
             QG IE             + ++ T +G  + D+V   L 
Sbjct: 379 LSQGLIEPDIFTNTGAPNPDASVKLTLQGRLLGDAVTRELL 419


>gi|261495031|ref|ZP_05991498.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309273|gb|EEY10509.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 385

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 131/388 (33%), Positives = 203/388 (52%), Gaps = 21/388 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ +I+  L ++       R   G R + S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHLLADLSQDLTAYRVAIGDRKLYS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      N+EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLSEVEKRIAFEPNIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+A+EA  AI  A+N         + DL++ LP Q++ Q  +
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNSAKSGLQSFNIDLMHGLPNQSVKQALV 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+  +S    HLS YQLTIE  T+FY         LP ++   D++     + +  G  
Sbjct: 187 DLETGISLNPPHLSWYQLTIEPNTMFY----YRKPTLPDDDELWDIFEQGHQLLTNAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQG 366
              G     ++ +  + +  EF M   RL E    +++E   G + +I          Q 
Sbjct: 301 ---GEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQEFEWFTGLDREIVRPTIDWALNQN 357

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +I     +  + TQ G   L+ ++    
Sbjct: 358 YISE-SSTHWQITQHGKLFLNELLEGFL 384


>gi|218288639|ref|ZP_03492916.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241296|gb|EED08471.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 388

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 120/377 (31%), Positives = 196/377 (51%), Gaps = 12/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C YCDF + V +     E ++ + + E   M  L  P  +++ +FGGG
Sbjct: 12  SLYVHIPFCKSRCFYCDFTTFV-KSPAAMEAYVDALVAEWDLMEPLEAP--LATAYFGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+    +  +LD + + +  S++ EIT E+NP S+     +  R  GVNRIS G Q+
Sbjct: 69  TPTLLSASLLDRLLDAMRQRFDFSADAEITFESNPDSITREKLRVLRDHGVNRISFGAQA 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ +GR H       A+  AR+  FP ++ DL++ LP QT+      ++  L   
Sbjct: 129 FQDHLLQAIGRAHLRDAIEEAVWAARDLGFPHVNIDLMFGLPDQTLHDVAESVEAVLRLP 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDH+S Y L IE GT F K H+ G L LP E+   D+Y L + +    G   YEISN + 
Sbjct: 189 VDHVSAYWLKIEPGTPFAKWHEMGLLSLPGEDAEADMYRLVRDVLRDAGFVHYEISNFAR 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E+ HNL YWR   Y   G GAH   +   +    ++E+   ++L  VR+    V  +
Sbjct: 249 PGGEARHNLVYWRNEPYCASGVGAHGYARGERY----AMERRFSAYLAAVREGRRPVSAR 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           + +   ++A++ +++GLRL EG+  + +E   GR ++         L  +G +ER + S 
Sbjct: 305 QRVPVAERAEDQVILGLRLAEGVDRQRFERRFGRTIEDVFPGVVERLLAEGLLER-RGSA 363

Query: 376 LRCTQRGMTMLDSVIAN 392
            R       + +++   
Sbjct: 364 YRIPDAYWPIANAIFEQ 380


>gi|125717905|ref|YP_001035038.1| coproporphyrinogen III oxidase [Streptococcus sanguinis SK36]
 gi|125497822|gb|ABN44488.1| Coproporphyrinogen III oxidase, putative [Streptococcus sanguinis
           SK36]
          Length = 376

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYNAYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V+  G A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLEAVKA-GDA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAVVSELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|219870503|ref|YP_002474878.1| coproporphyrinogen III oxidase [Haemophilus parasuis SH0165]
 gi|219690707|gb|ACL31930.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parasuis SH0165]
          Length = 383

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 130/393 (33%), Positives = 201/393 (51%), Gaps = 31/393 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++ +IQ  L +++      +     R I S
Sbjct: 4   PLSLYIHIPWCVQKCPYCDFNSHAQKGIIPEQEYIQHLLNDLEQDLISYKTAIADRKIHS 63

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + I  +L  I K    S   EIT+EANP + E   F GY + GVNRI
Sbjct: 64  IFIGGGTPSLFSAEGIHYLLAEIRKRIDFSHECEITLEANPGTAEAERFIGYVQGGVNRI 123

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN----IFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+  A+N         + DL++ LP Q++ Q   
Sbjct: 124 SMGIQSFEPEKLLKLGRIHDSNEAKQAVRFAQNSARVGLRSFNIDLMHGLPNQSVAQALD 183

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++    HLS YQLTIE  T+FY         LP ++   D++     + +  G  
Sbjct: 184 DLRQGIALNPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTDAGYE 239

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 240 QYETSAYAKKGYQCQHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-------LDIECERN 361
              G     +E + ++ +  EF M   RL E     ++E   G +       +D    RN
Sbjct: 298 ---GEYRYHQEMIENDDRPFEFFMNRFRLLEATPKTEFEAYTGLDRTQVQATMDWALSRN 354

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +           + TQ G   L+ ++    
Sbjct: 355 FISE------SNEYWQITQHGKLFLNELLEGFL 381


>gi|148262291|ref|YP_001228997.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Geobacter uraniireducens Rf4]
 gi|146395791|gb|ABQ24424.1| coproporphyrinogen III oxidase, anaerobic [Geobacter uraniireducens
           Rf4]
          Length = 381

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 140/380 (36%), Positives = 211/380 (55%), Gaps = 7/380 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGG 78
            +Y+H+PFC+KKC YCDFNS         E ++ + + EM+   + L  P +  +++FGG
Sbjct: 4   SLYIHFPFCLKKCLYCDFNSVADSPLKPAE-YVATLVREMELCAKTLRAPVTAPTLYFGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP+ +  I+D  A+ + + ++ EITIEANP ++ +    GYR AGVNR+SLGVQ
Sbjct: 63  GTPSLMEPELVGAIIDAAARLFGLEADGEITIEANPGTLTLEKLAGYRTAGVNRLSLGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S ++  L  LGR H A EA+AA   AR   F  +  DLI++LP Q++  W   L RA S 
Sbjct: 123 SFDDPLLARLGRVHTADEAMAAYAAARAAGFTNIGIDLIHSLPGQSVEMWRNALDRATSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A +H+S Y L+IE+ T F+++ + G L LP E  AV ++  T  + +  G   YEISN +
Sbjct: 183 APEHISAYGLSIEEETPFFRLEEAGALPLPDEEEAVAMFEATIEVLAGKGYQYYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YWR G+Y+G G GAHS ++     V          +L+ V+++  A  E
Sbjct: 243 LPGFRSRHNQVYWRRGNYLGFGAGAHSFLREPDWGVRWKNPDSYVPYLEAVQRSVLAAEE 302

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFS 374
           +  LS  +   E   +GLRL +G+ ++  E   G  ++       R L  QG +      
Sbjct: 303 RHPLSRREALSEAFFLGLRLLDGVDLRLLEGEFGPAVEEYFAAPIRELTAQGLLA-ADAG 361

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  + R + + + V A   
Sbjct: 362 RLCLSPRAIIVANQVFARFL 381


>gi|118473719|ref|YP_888797.1| coproporphyrinogen III oxidase [Mycobacterium smegmatis str. MC2
           155]
 gi|118175006|gb|ABK75902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mycobacterium smegmatis str. MC2 155]
          Length = 390

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 119/391 (30%), Positives = 194/391 (49%), Gaps = 13/391 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQL 65
           + ++        G+Y+H PFC  +C YCDFN++      G   E ++++   E++   + 
Sbjct: 10  QPDLAPTPGRPFGIYIHVPFCATRCGYCDFNTYTPSELGGANPEGWLEALRVELRLAAER 69

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G  ++ ++F GGGTPSL+    ++ +LD +  N+ +++  E+T EANP S     F   
Sbjct: 70  VGALAVQTVFVGGGTPSLLGGDGLSAVLDAVRDNFVLATGAEVTTEANPESTSPELFAAL 129

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R AG  RISLG+QS+    L  L R H+   A AA+  A+   F  ++ DLIY  P ++ 
Sbjct: 130 RNAGYTRISLGMQSVAPHVLAVLNRTHSPGRAPAAVAEAKAAGFEHVNLDLIYGTPGESD 189

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                 +  A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L  +  S
Sbjct: 190 DDLLRSVDAAVHAGVDHVSGYALVVEDGTALARRVRRGEIAAPDDDVLAHRYELLDAQLS 249

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           A G   YE+SN S  G E LHNL YW  G++ G GPGAH  +       A    KHP ++
Sbjct: 250 AAGFAWYEVSNWSRPGGECLHNLGYWDGGEWWGAGPGAHGFLNATRWWNA----KHPNAY 305

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            + + +    + + E L +  +  E +M+ LRLR G+++ D         +      +  
Sbjct: 306 AQTLAEGALPIADFEVLDAADRHTEDVMLRLRLRRGLALDDLAAD-----ERARVPEIVA 360

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G ++     R+  T RG  + D V+  L  
Sbjct: 361 EGLLD-TAGERVVLTDRGRLLADGVVRALLA 390


>gi|315221708|ref|ZP_07863624.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus anginosus F0211]
 gi|315189195|gb|EFU22894.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus anginosus F0211]
          Length = 376

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + ++L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDAYLEHLLQEYTSYDIKHLQTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  Q +  +L  + K   +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAQQLEFLLAELTKKLDLSLLEELTIEANPGDLDPDKIAVLKDSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I +L    F  +S DLIYALPKQTM      + +A
Sbjct: 118 GVQTFDDRMLKQIGRSHLEKDIYENIANLKLAGFDNISIDLIYALPKQTMDNVRENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++          G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIEELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V K G+A
Sbjct: 238 NFSKPGFESQHNLMYWDNAEYFGIGAGASGYVNGVRYKNHGPI----RHYLEAVEK-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V +E LS ++  +E + +GLR + G+S K +E   G + D +  +    L  QG +   
Sbjct: 293 RVSEEHLSKQEMMEEEMFLGLRKKSGVSKKRFEEKFGVSFDRQYGQVVTELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DKEIVRMTKKGLFLGDTVAEKFIL 375


>gi|150390801|ref|YP_001320850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus metalliredigens QYMF]
 gi|149950663|gb|ABR49191.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alkaliphilus metalliredigens QYMF]
          Length = 379

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 115/383 (30%), Positives = 202/383 (52%), Gaps = 10/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDF S     K     ++++   E+   ++      I +IFF
Sbjct: 2   KEIGLYIHIPFCEKKCYYCDFTSF-SGEKHLIGPYVEALKQEVLLYKEALTGYEIKTIFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + +A +++ I ++  + +  EI++EANP  +  +    Y  +G+NR+S+G
Sbjct: 61  GGGTPSILSGEAMAELMEWIRRHVEIDTKAEISMEANPGLLSKDKLHRYYDSGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR H   + I  +  AR   F  ++ D+++ALP Q+M +W+  L   +
Sbjct: 121 LQACQDHLLKSLGRIHTYGDFIQNLADARGVGFSNINVDMMFALPNQSMNEWKASLTEII 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V HLS Y L IE+GT F +  +D  +    E + + +++ T  I  + G   YEISN
Sbjct: 181 DLGVPHLSTYGLIIEEGTSFNQWVEDKKIKTLDEELELAMFHETIRILKSKGYTHYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    E  HN  YWR   Y+G+G GAHS  +    ++  S   H   ++  +      +
Sbjct: 241 FSKPEYECRHNQIYWRNRPYLGLGVGAHSYFE----KMRFSNTSHIGIYINKINIGEKPL 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
             +E ++   +  E + +GLRL EG+S+ D+      ++     +    L  QG +  ++
Sbjct: 297 DTQELITRNDEISETMFLGLRLLEGVSINDFTERFQSSVFDVYGDVINKLISQGLLT-IK 355

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+R +QRG+ + + V A + +
Sbjct: 356 GDRIRLSQRGVDLSNIVFAEMLL 378


>gi|323692759|ref|ZP_08106987.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14673]
 gi|323503201|gb|EGB19035.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14673]
          Length = 407

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 124/401 (30%), Positives = 211/401 (52%), Gaps = 15/401 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
               T + +  L +Y+H PFCVKKC YCDF S     +V ++ +++  + E++       
Sbjct: 9   NQAGTMENNTPLELYIHIPFCVKKCLYCDFLSFAA-DEVTRKKYVEQLIKEIETCGTRIT 67

Query: 68  PR------SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            R       + S+F GGGTPS + P+ I  +++ + +N+ +  + EITIEANP +++   
Sbjct: 68  GRDADAAFPVISVFIGGGTPSSLCPEQICAVMNAVKENFRLLPDAEITIEANPGTLDNKK 127

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            + Y+ +G+NR+SLG+QS     LR LGR H+ +E + +  LAR   F  ++ DL+ ALP
Sbjct: 128 LRAYKNSGINRLSLGLQSANPGELRELGRIHSWNEFLESYRLAREAGFDNINVDLMSALP 187

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q+   +   L+       +H+S Y L IE+GT FY  +     VLP E     +Y+ T+
Sbjct: 188 GQSFESYADTLECVALLEPEHISAYSLIIEEGTPFYDKYSGRAEVLPDEEEDRRMYHHTK 247

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              +  G H YE+SN++  G E +HN+ YW    Y+GIG GA S ++     V   +  +
Sbjct: 248 EYLAEKGYHRYEVSNYARPGRECIHNVGYWTGVSYLGIGLGASSLMEGQRFSVIREMNDY 307

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
            +   + + +       +E L+ + + +EF+ +GLRL EGI+ KD++   G N++     
Sbjct: 308 LDLSREELAEGRQ-YENREILTEQDEMEEFMFLGLRLTEGIAAKDFKKRFGLNIEEIYGM 366

Query: 359 -ERNLQRQGFIERV---QFSRLRCTQRGMTMLDSVIANLAV 395
               L   G +E     +  R R ++ G+ + + V+A   +
Sbjct: 367 TIGKLMEDGLMEMTGTKEDRRYRLSEFGLDVSNCVLAEFLL 407


>gi|238752328|ref|ZP_04613807.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia rohdei ATCC 43380]
 gi|238709489|gb|EEQ01728.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 206/371 (55%), Gaps = 17/371 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  +  V  + +++  L ++     L G R +S+IF GGGTPSL+  + +
Sbjct: 2   QKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVPLVGNREVSTIFIGGGTPSLLSAEAM 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +LDG+     +++  EIT+EANP +VE + F GY++AG+NRIS+GVQS   + L  LG
Sbjct: 62  QQLLDGVRARLPLAAGAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAEKLTRLG 121

Query: 150 RNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++    HLS YQLT
Sbjct: 122 RIHGPQEAKRAAELATSLKLRSFNLDLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T F          LP ++   D++     + SA G   YE S ++  G +  HNLN
Sbjct: 182 IEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  +++  + 
Sbjct: 238 YWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVAAVDRP 292

Query: 328 DEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
            EF M   RL E     D+    G     +  + +  L ++  IE  ++   + T++G  
Sbjct: 293 FEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEEY--WQITEKGKL 350

Query: 385 MLDSVIANLAV 395
            L+S++  L +
Sbjct: 351 FLNSLL-ELFL 360


>gi|308272747|emb|CBX29351.1| hypothetical protein N47_J03320 [uncultured Desulfobacterium sp.]
          Length = 400

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 135/385 (35%), Positives = 206/385 (53%), Gaps = 14/385 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            N  G+Y+H PFC+ KCPYCDF S        ++ F+++ L EM   + +  P    +I+
Sbjct: 22  PNPAGLYIHIPFCISKCPYCDFYSIT--DHSLKKKFVKALLLEMSLYKSV--PLIYDTIY 77

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++ ++I  I++ +   + ++ + EITIE NP +V   + + +++ G+NRI++
Sbjct: 78  IGGGTPSALKSKDIGQIIETVFNLYKITPDPEITIEVNPKTVTPGSLKEFKQTGINRINI 137

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  ++ LRFLGR H+A EA  AI  A+N  F  +  DLIY +P QT   W  +L+ A
Sbjct: 138 GVQSFSDEYLRFLGRIHSAMEAKEAIAWAKNAGFENLGIDLIYGIPGQTEKSWLFDLKTA 197

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    DH+S Y LT E  T  Y   K G      + +A  L+ LT       G   YEIS
Sbjct: 198 IQIEPDHISCYTLTYEPKTPIYNHMKSGAFSPMPDFLAGSLFELTSDFLENCGYIHYEIS 257

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N S     +S HNL YW    YIG GP AHS           S+      ++K +     
Sbjct: 258 NFSKGTSKKSRHNLKYWSDAPYIGFGPSAHSFDGTSRSWNVRSV----ADYIKTIESGLF 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
            V EKE LS EQQ  E +++GLR +EGI++ ++ +  G   +    E   +L+ +  I  
Sbjct: 314 PVEEKEVLSKEQQIIEAILLGLRKKEGITISNFNIKFGLIFEEVFKETISDLKEKKLIA- 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  ++ R T++G  +LDS+ A   +
Sbjct: 373 LDNNQCRLTKKGTLLLDSICAMFTL 397


>gi|254784467|ref|YP_003071895.1| oxygen-independent coproporphyrinogen III oxidase [Teredinibacter
           turnerae T7901]
 gi|237687347|gb|ACR14611.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Teredinibacter turnerae T7901]
          Length = 388

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 11/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +YVH P+CV+KCPYCDFNSH  R ++  + +I + L +    R     R I S+FFG
Sbjct: 11  PLSLYVHIPWCVRKCPYCDFNSHSVRSELPVDAYIDALLADCSADRHFAQQRKIRSVFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + IA +LDG+ +    + + EIT+E NP + E +NF  YR AGVNRISLG 
Sbjct: 71  GGTPSLLPGKAIARLLDGLRERLDFTRDCEITLETNPGTAEYSNFADYRAAGVNRISLGA 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H       A   AR+  F  ++ DL++AL  Q       +L+ A++
Sbjct: 131 QSFNALQLQQLGRIHQPENIQIAFTQARDAGFDNINLDLMFALQGQNCADAMRDLEAAIA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S YQLTIE  T FY         LP ++ + ++      + +      YE+S +
Sbjct: 191 LEPEHISWYQLTIEPNTAFYSNPP----SLPDDDTSWEIQQAGMQLLADSNYAQYEVSAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKNGHA 314
           +  G ++ HN+NYW +GDY+ IG GAH ++     +        + P+ +L   +     
Sbjct: 247 ARAGKQAAHNINYWEFGDYMAIGAGAHGKITWPEENRIERYQKTRLPDHYLAAAQTCAF- 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
              +E L+      EF+M  LRL +G++ + +    G  L         L+ +G +    
Sbjct: 306 TSHRETLAEHNLPFEFMMNALRLNQGVASELFTARTGLPLASLEPQLTPLREKGLLG-TD 364

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             RL  T  G   L+SV+ +L 
Sbjct: 365 PQRLYTTTLGHQYLNSVLESLL 386


>gi|33152698|ref|NP_874051.1| coproporphyrinogen III oxidase [Haemophilus ducreyi 35000HP]
 gi|33148922|gb|AAP96440.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Haemophilus ducreyi 35000HP]
          Length = 394

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 135/395 (34%), Positives = 204/395 (51%), Gaps = 30/395 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +     R I S
Sbjct: 11  PLSLYIHIPWCVQKCPYCDFNSHTQKGTIPEAEYIQHLLADLSQDLVTYKTAIANRKIHS 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  I +    +  +EIT+EANP + E   F  Y +AG+NRI
Sbjct: 71  IFIGGGTPSLFSAEAIAYLLAEIKQRIAFAPKIEITLEANPGTAEAERFICYTEAGINRI 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI---------FPRMSFDLIYALPKQTM 184
           S+G+QS EE+ LR LGR H+A EA  A++ A+N              + DL++ LP QT+
Sbjct: 131 SMGIQSFEEEKLRKLGRIHDAHEAKQAVYFAKNALISPSRTVGLHSFNLDLMHGLPNQTL 190

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            Q   +L  A+S    H S YQLTIE  T+FY         LP ++    ++     + +
Sbjct: 191 EQALADLNTAISLNPPHFSWYQLTIEPNTMFYYRQP----TLPDDDELWAIFEQGHQLLT 246

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPES 303
             G   YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   S  +   S  KHP+ 
Sbjct: 247 MAGYQQYETSAYAKQGFQCQHNLNYWRFGDYLAIGCGAHGKISYPSGEIYRFSKTKHPKG 306

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN-- 361
           +++     G     ++ +  + +  EF M   RL E    +++E   G  LD E  R   
Sbjct: 307 YMR-----GDYRDSQQSIQLDDRPFEFFMNRFRLLEPTPKQEFECYTG--LDCERVRPTI 359

Query: 362 --LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                + +I     +  + TQ+G   L+ ++A   
Sbjct: 360 DWALNKHYISETS-TTWQVTQKGKLFLNELLAGFL 393


>gi|15894561|ref|NP_347910.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum ATCC
           824]
 gi|15024207|gb|AAK79250.1|AE007640_5 Coproporphyrinogen III oxidase [Clostridium acetobutylicum ATCC
           824]
 gi|325508693|gb|ADZ20329.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum EA 2018]
          Length = 374

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 115/383 (30%), Positives = 207/383 (54%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N LG+Y+H PFC  KC YCDF S+          + ++  TE++   + +  +  SSIF 
Sbjct: 2   NKLGLYIHIPFCKSKCLYCDFPSYACIEDYMI-PYAKALCTEIE---KASINKVFSSIFI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + + ++ D + K    + +VE T+E NP+S        ++  GVNR+S+G
Sbjct: 58  GGGTPSFLSIEALNILCDALKKVRK-TKDVEFTVEGNPNSFTEKKLMVFKDMGVNRLSIG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ +++ L+ LGR H   E   A   ARN  F  ++ DL++ +P QT+  ++  L+   
Sbjct: 117 LQACQDRLLKKLGRIHTLKEFTVAFKRARNLGFNNINVDLMFGIPDQTLEDFKESLEFIT 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L +E+GT ++KM++ G L LP+E+   D+Y+  ++     G + YEISN
Sbjct: 177 KLKPEHISSYSLIVEEGTPYFKMNEGGKLKLPNEDEERDMYSFARTFLEEKGYNQYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +    E  HNL YW   +YIG G  AHS      +R   +++K    +++ + K    V
Sbjct: 237 FAVKDKECRHNLIYWELDNYIGCGASAHSYFNGVRYRNINNVKK----YIEQISKGNSVV 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E      ++  +EF+ +GLR   G+S++++++   +++     +  +  +  G I   +
Sbjct: 293 EENHRNLLKEDMEEFMFLGLRKTRGVSIEEFKLKFNKDIQEVYGDVIKKYETIGMIILNE 352

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  T+RGM + +S++ +  +
Sbjct: 353 H-RVFLTERGMQISNSIMCDFLL 374


>gi|149173350|ref|ZP_01851980.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
 gi|148847532|gb|EDL61865.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
          Length = 394

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 118/378 (31%), Positives = 197/378 (52%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC  +C YCDF + V +     E ++ +   +M    +L     + ++F GGG
Sbjct: 26  SAYFHVPFCQHRCGYCDF-TLVAQKDHLIEAYLDAMAKQM---SELGEGIELKTLFLGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + ++ + + I  ++ ++++ E +IEANP ++     +  +++GVNR+SLGVQS
Sbjct: 82  TPTHLSIEQLSHLFESIFSHFRLAADYEFSIEANPLNLTSEKIEFLKQSGVNRVSLGVQS 141

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + + L FL R+H   +    +   ++     S DLI+A+P Q++  W+  LQ A+   +
Sbjct: 142 FDSEILTFLERDHQPDQIFEIVKSLQSRISNTSLDLIFAVPGQSLAGWKQTLQNAVQLNI 201

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LTIEKGT F+   K G   LP +++A D+Y          GL  YEISN +  
Sbjct: 202 PHISTYGLTIEKGTSFWSREKAGLFDLPQDDLAGDMYEYALEFLDQAGLQHYEISNFARP 261

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HN  YW    Y G GPGA S +     +   S+     +WLK V+     +V++E
Sbjct: 262 GYECRHNEVYWTGYPYFGFGPGAASYLDGIRRQNHRSVI----TWLKRVQAGESPIVDQE 317

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRL 376
            L  E +A E ++ GLR R GI+ ++++   G +L    E  ++     G +E    + L
Sbjct: 318 ELEPEARAREAIIFGLRRRAGINRREFQERYGFDLHQLAETAIRTNLEAGLLEETD-THL 376

Query: 377 RCTQRGMTMLDSVIANLA 394
           + T  G  + DS++ +  
Sbjct: 377 KLTSAGCLLADSIVVDFL 394


>gi|238898975|ref|YP_002924657.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466735|gb|ACQ68509.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 128/382 (33%), Positives = 203/382 (53%), Gaps = 15/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C+KKCPYCDFNSH  + ++  E ++   L +++    LT  R+I +IF G
Sbjct: 6   PLSLYIHIPWCIKKCPYCDFNSHALKGELPHEEYVAHLLADLEADIPLTSGRAIETIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  +L G+     +  + EIT+EANP ++E   F  Y++AG+NRIS+G+
Sbjct: 66  GGTPSLLSAQAMQQLLHGVKARIDIRKDAEITMEANPGAIEAKRFVDYQQAGINRISIGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q L  LGR H+A +   A HLA+ +     + DL+++LP QT+     +L++A+ 
Sbjct: 126 QSFDNQKLLALGRIHDAEQGKKAAHLAQTLSLSSFNLDLMHSLPDQTLEDALKDLEQAMI 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  HLS YQLTIE  T F          LP E+ + D+           G   YEIS +
Sbjct: 186 LSPPHLSWYQLTIEPHTAFSSRPP----PLPDEDSSWDIVQKGHQCLQKAGYEQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
           +    +  HNLNYWR+GDY+GIG GAH ++     R+  +++ KHP  +++         
Sbjct: 242 AKKEHQCQHNLNYWRFGDYLGIGCGAHGKLTFDDGRMIRTVKTKHPRGFMQG-----QYQ 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF 373
            ++  +   ++  EF M   RL E     D+  L G                G+++    
Sbjct: 297 YQQYDVDLAERPFEFFMNRFRLLEPTPRADFLNLTGVKESHIRSALDQALNLGYLKE-DT 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
              + T++G   L+S+I  L +
Sbjct: 356 QYWQVTEKGKWFLNSLI-ELFL 376


>gi|238763266|ref|ZP_04624231.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia kristensenii ATCC 33638]
 gi|238698539|gb|EEP91291.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 203/371 (54%), Gaps = 17/371 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + +
Sbjct: 2   QKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVPLVSGREISTIFIGGGTPSLLSAEAM 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +LDG+     ++ N EIT+EANP +VE + F GY++AG+NRIS+GVQS     L  LG
Sbjct: 62  QQLLDGVRARLPLAMNAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAAKLTRLG 121

Query: 150 RNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++    HLS YQLT
Sbjct: 122 RIHGPEEAKRAAELATSLQLRSFNLDLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T F          LP ++   D++     + SA G   YE S ++  G +  HNLN
Sbjct: 182 IEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  + +  + 
Sbjct: 238 YWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVEAADRP 292

Query: 328 DEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
            EF M   RL E     D+    G     +  + +  L +Q  IE  ++   + T++G  
Sbjct: 293 FEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKQYLIETEEY--WQITEKGKL 350

Query: 385 MLDSVIANLAV 395
            L+S++  L +
Sbjct: 351 FLNSLL-ELFL 360


>gi|320547107|ref|ZP_08041403.1| coproporphyrinogen dehydrogenase [Streptococcus equinus ATCC 9812]
 gi|320448233|gb|EFW88980.1| coproporphyrinogen dehydrogenase [Streptococcus equinus ATCC 9812]
          Length = 376

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 203/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   + ++Q+ + E +        + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIREFESY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  + +  +L  + K+  +S   E TIEANP  +  +  +  + + VNR+SL
Sbjct: 58  IGGGTPTSITAEQLEYLLTNLTKHLDLSVLEEFTIEANPGDLTEDKIEVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++  + I   +   F  +S DLIYALP QTM   +  + +A
Sbjct: 118 GVQTFNDKHLKQIGRSHNEAQIYSTIENLKKAGFHNISIDLIYALPGQTMEDVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP E++  +++    S    +G   YEIS
Sbjct: 178 IALDIPHLSLYSLILEHHTVFMNKMRRGKLQLPQEDLEAEMFEYIISELEKNGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW   +Y G+G GA   +    +R    I    + +LK + + G+A
Sbjct: 238 NFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPI----QHYLKAISE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
            + +E L+ E+  +E L +GLR + G+S+  +E   G + +    +  R L  QG +   
Sbjct: 293 RLSEETLTKEEMMEEELFLGLRKKSGVSIARFEEKFGVSFEERYGQIVRELCNQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DDKVVRMTKKGLFLGDTVAERFIL 375


>gi|296133947|ref|YP_003641194.1| oxygen-independent coproporphyrinogen III oxidase [Thermincola sp.
           JR]
 gi|296032525|gb|ADG83293.1| oxygen-independent coproporphyrinogen III oxidase [Thermincola
           potens JR]
          Length = 378

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 122/383 (31%), Positives = 199/383 (51%), Gaps = 12/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIF 75
           ++G+Y+H PFCVKKC YCDF S+     +   +++ + L E++   Q      + ++S++
Sbjct: 2   AIGLYIHVPFCVKKCNYCDFISYPYDAGL-TASYVSALLKEIELYGQQLSGKDKELASVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +  +   +   +      E+T+EANP +++      ++  G NR+S+
Sbjct: 61  IGGGTPSLLSVPQLEAVFGNLGSFFDYVPGAEVTVEANPGTLDREKLNNWKAFGCNRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS+ +  LRFLGR H A EA  A +LAR   F  ++ DLI+ +P Q M  W   L+R 
Sbjct: 121 GIQSMNDSLLRFLGRIHRADEAAHAFYLAREAGFDNINIDLIFGIPGQGMHDWSDTLRRV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +H+S Y L IE+GT   ++  +G L    E++ V++Y  T     A G   YEIS
Sbjct: 181 LELGPEHISAYGLKIEEGTPLARLQAEGQLPPGDEDLEVEMYFHTIDTLRAAGYEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G  S HNL YW   +Y+G+GP AHS +    H    S       +   +      
Sbjct: 241 NFCRPGKASAHNLRYWANKEYLGLGPAAHSYL----HGERFSNRPGLNEYCTALNDGLLP 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
           V E+  +    +  E + +GLRL  G+++KD+    G++++         L+R G +E+ 
Sbjct: 297 VAERNPVDRHGEISETIFLGLRLINGLNLKDFRQRFGQSIEELFPAALDKLERLGLVEKR 356

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               LR T++G+ + + V A   
Sbjct: 357 DV-FLRLTRKGLPLANEVFAEFV 378


>gi|254382706|ref|ZP_04998063.1| coproporphyrinogen III oxidase [Streptomyces sp. Mg1]
 gi|194341608|gb|EDX22574.1| coproporphyrinogen III oxidase [Streptomyces sp. Mg1]
          Length = 416

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWM 62
            + G G   LG Y+H P+C  +C YCDFN++      G       +EN+  + + E++  
Sbjct: 27  ALAGAGDRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRENYADTLIDEVRLA 86

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           R++ G  PR + ++F GGGTP+L+   ++  +L  I   + ++ + E+T EANP SV+  
Sbjct: 87  RKVLGDDPRPVRTVFVGGGTPTLLPAGDLVRMLAAIRDEFGLAEDAEVTTEANPESVDPR 146

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R  G NR+S G+QS  +  L+ L R H      A +  AR   F  ++ DLIY  
Sbjct: 147 YLEELRAGGFNRVSFGMQSARQHVLKVLDRTHTPGRPEACVAEARAAGFEHVNLDLIYGT 206

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P ++   W   L+ AL    DH+S Y L +E+GT   +  + G++ +  ++V  D Y + 
Sbjct: 207 PGESDDDWRASLEAALGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYLIA 266

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
            S+ +  G   YE+SN +       LHN  YWR  D+ G GPGAHS V      V     
Sbjct: 267 DSVMAEAGYSWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWWNV 322

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP ++   +         +E LS+E +  E +++ LRL +G  +            +  
Sbjct: 323 KHPGAYAAALAAGRSPGAGRELLSAEDRRVERILLELRLVDGCPLAL-----LAPAGLAA 377

Query: 359 ERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
                  G +E   +   R   T RG  + D+V+ +L 
Sbjct: 378 AGRALADGLLEPGPYAAGRAVLTLRGRLLADAVVRDLV 415


>gi|189184081|ref|YP_001937866.1| coproporphyrinogen III oxidase [Orientia tsutsugamushi str. Ikeda]
 gi|189180852|dbj|BAG40632.1| oxygen-independent coproporphyrinogen III oxidase [Orientia
           tsutsugamushi str. Ikeda]
          Length = 400

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 168/396 (42%), Positives = 243/396 (61%), Gaps = 15/396 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
                S+ VY+HWPFC+ KCPYCDFNSHV   KV   ++  +F   +++   L   + I 
Sbjct: 6   NLADESISVYIHWPFCLSKCPYCDFNSHVAT-KVNFNDWQLAFRKSIKYFEPLLTGKIIK 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           SIFFGGGTPSL++P+ +A IL+ ++     S  VEIT+EANP+SVE   FQ +R AG+NR
Sbjct: 65  SIFFGGGTPSLMDPELVASILNLLSSLAKFSDTVEITLEANPTSVEAKKFQQFRLAGINR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S+GVQSL   +L+FLGR H+   A  A+ LA+ IFP+ SFDLIYA+ +Q + +W+ ELQ
Sbjct: 125 VSIGVQSLRLNNLKFLGRTHDVESAKHAVTLAKTIFPKFSFDLIYAIAEQEVEEWKQELQ 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+  A  H+S+YQLTIEKGT F+  ++ G   LPS+  A  LYN T       G H YE
Sbjct: 185 EAMLIAGSHVSIYQLTIEKGTKFFGDYRKGKFTLPSDETAAKLYNYTNHYLKNLGYHRYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV--------AISIEKHPESW 304
           ISN+S +GAE  HNLNYW YG Y+GIGPGAHSR+   ++ V        AI+++ +P+ W
Sbjct: 245 ISNYSKIGAECYHNLNYWNYGSYLGIGPGAHSRIVCYNNGVNGDSKSVKAITMQYNPQKW 304

Query: 305 L-KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECE 359
           L  ++  +G+ + +   L+ +    E ++MGLRL  GIS      L G    + L ++  
Sbjct: 305 LNDILLASGNGIQDLHTLTDDDVIKEVIIMGLRLSTGISHDRLLELTGCNFQQALSMKYV 364

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             LQ  G+I     + +R T + M + + ++  + +
Sbjct: 365 HQLQDTGYIVMSNNN-IRLTDKAMLVYNYIVNKIVI 399


>gi|238798800|ref|ZP_04642270.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia mollaretii ATCC 43969]
 gi|238717371|gb|EEQ09217.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia mollaretii ATCC 43969]
          Length = 360

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 131/371 (35%), Positives = 205/371 (55%), Gaps = 17/371 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + +
Sbjct: 2   QKCPYCDFNSHALKGDVPHQEYVEHLLADLDVDAPLVSGREISTIFIGGGTPSLLSAEAM 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +LDG+     V+ + EIT+EANP +VE + F GY++AG+NRIS+GVQS   Q L  LG
Sbjct: 62  QQLLDGVRARLPVAVDAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAQKLTRLG 121

Query: 150 RNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++    HLS YQLT
Sbjct: 122 RIHGPDEAKRAAELATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T F         VLP ++   D++     + SA G   YE S ++  G +  HNLN
Sbjct: 182 IEPNTSFSSRPP----VLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  + +  + 
Sbjct: 238 YWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVEAADRP 292

Query: 328 DEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
            EF M   RL E     D+    G     +  + +  L ++  IE  ++   + T++G  
Sbjct: 293 FEFFMNRFRLLEAAPRADFYHFTGLAESTIRPQLDEALAKEYLIETEEY--WQITEKGKL 350

Query: 385 MLDSVIANLAV 395
            L+S++  L +
Sbjct: 351 FLNSLL-ELFL 360


>gi|134098063|ref|YP_001103724.1| coproporphyrinogen III oxidase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910686|emb|CAM00799.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 409

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 129/398 (32%), Positives = 191/398 (47%), Gaps = 21/398 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL 65
           + + G GS   GVYVH PFC  +C YCDFN++         G  ++++    E+    ++
Sbjct: 20  SALAGLGSRPFGVYVHVPFCATRCGYCDFNTYTADELGSSAGFGSWLEGLRAELDLGARV 79

Query: 66  T--GPRSI---SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              G   +    ++F GGGTPSL+  + +  +LD +  ++ ++   E+T E+NP S    
Sbjct: 80  LAAGGEPVPAAGTVFAGGGTPSLLGAERLGEVLDAVRSSFGLADGAEVTTESNPESTSPE 139

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYAL 179
            F+G   AG  R+SLG+QS  +  LR L R H       AA       F  ++ DLIY  
Sbjct: 140 FFEGIAAAGYTRVSLGMQSAAQHVLRVLERRHTPGRAVEAAREARAAGFGHVNLDLIYGT 199

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T       L   L   VDH+S Y L +E GT   +  + GDL +P E+V  D Y L 
Sbjct: 200 PGETDDDLRASLDAVLEAGVDHVSAYSLIVEDGTAMARKVRRGDLPMPDEDVLADRYELL 259

Query: 240 QSITSAHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             +    GLH YE+SN +    A  +HN+ YWR GD+ G GPGAHS V      V     
Sbjct: 260 DGVLGGAGLHWYEVSNWARDDAARCMHNIGYWRGGDWWGAGPGAHSHVGG----VRWWNV 315

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           KHP  +  ++ +     + +E L +E Q  E +M+ LRL  G+ +   +  AGR      
Sbjct: 316 KHPARYSALLAEGASPALAREVLDAEDQRIERVMLELRLASGLPLAVLDE-AGR----LA 370

Query: 359 ERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLA 394
            +     G +  + +   R   T RG  + D VI  L 
Sbjct: 371 AKEAVADGLLRADALAADRCVLTDRGRLLADGVIQRLI 408


>gi|323359825|ref|YP_004226221.1| coproporphyrinogen III oxidase [Microbacterium testaceum StLB037]
 gi|323276196|dbj|BAJ76341.1| coproporphyrinogen III oxidase [Microbacterium testaceum StLB037]
          Length = 405

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 120/395 (30%), Positives = 197/395 (49%), Gaps = 18/395 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQL-- 65
           ++T   S   GVY+H PFC  +C YCDFN++         Q++F  +   E++   ++  
Sbjct: 20  DLTIDPSTDFGVYLHVPFCRVRCGYCDFNTYTASELRGARQDDFADTLAAEVRLAGRVMD 79

Query: 66  -TGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             G R + S++FFGGGTP+L+ P ++A +LD +   + ++   E+T+EANP +V+    +
Sbjct: 80  AAGSRRVASTVFFGGGTPTLLPPGDLARMLDAVRAEFGIADGAEVTVEANPDTVDDAVME 139

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
               AGV R+S+G+QS     L  L R H+ +    A+  AR     +S DLIY  P ++
Sbjct: 140 TLAAAGVTRVSIGMQSARTHVLAALDRTHDPANVATAVAAARRAGLDVSLDLIYGAPGES 199

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L+ A     DH+S Y L +E GT   +  + G +  PS+++  D+Y L   + 
Sbjct: 200 LDDWRASLEAAAVLEPDHISAYALIVEDGTKLARQIRSGAVAEPSDDLQADMYELADELL 259

Query: 244 SAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +  G   YE+SN S  +   S HNL YWR  D+ G GPGAHS V      +     KHP 
Sbjct: 260 ADAGYDWYEVSNWSRGVPHRSRHNLAYWRGTDWWGFGPGAHSHVAG----LRWWNVKHPA 315

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           ++ + +         +E      +  E +++  R+REG++V +           +   +L
Sbjct: 316 AYAQRLAAEESPAAARERPDETARRLESVLLRSRIREGLAVSEL-----LGEGRKAVASL 370

Query: 363 QRQGFIERVQF--SRLRCTQRGMTMLDSVIANLAV 395
              G +E       R+  T+RG  + D+V+  L  
Sbjct: 371 IADGLVEGPDAVRGRIVLTRRGRLLADAVVRALTA 405


>gi|289178665|gb|ADC85911.1| Oxygen-independent coproporphyrinogen-III oxidase [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 478

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 130/427 (30%), Positives = 192/427 (44%), Gaps = 38/427 (8%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQ- 60
           +    +     S    VYVH PFC+++C YCDFN++          + N+    + EM+ 
Sbjct: 47  APLTAHPPASASMPFEVYVHVPFCIRRCGYCDFNTYTALDLGEGASRANYATLAIREMRV 106

Query: 61  ----WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                +         S++FFGGGTP+L+   ++  +LD + + W +  + EIT EANP S
Sbjct: 107 VHEWQLAHGVVEPPASTVFFGGGTPTLLPAGDLVAMLDAVREIWGIREDAEITTEANPDS 166

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
           V+    +  R  G  RIS G+QS     LR L R HN S   A +  A  +    S DLI
Sbjct: 167 VDPGYLRLLRDGGFTRISFGMQSSVPHVLRTLDRTHNPSNVAADVEAAHRLGLETSVDLI 226

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P +++  W   ++ A+   V H+S Y LT+E  T   +    G++  P ++     Y
Sbjct: 227 YGAPGESIEDWCDSVRSAIDLGVHHISAYALTVEPHTKMGRRIAAGEIEAPDDDDEATKY 286

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR---- 292
            L   + SA GL  YEISN +  G ES HNL YWR  D+ GIGPGAHS            
Sbjct: 287 ELADQLLSAAGLEWYEISNWARPGHESRHNLGYWRNVDWAGIGPGAHSHYNAVRRMDMGI 346

Query: 293 -------------------------VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
                                    +      HP  W   ++ N     + E +  ++ A
Sbjct: 347 GHDPKAGIPVGANGQGYPARDTWTSMRAWDIPHPRVWAVALQHNRVPWQDFELIDCDENA 406

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLD 387
           +E LM+G+RLREG++V  +    G  +       L  +G + R   + L  T RG  + D
Sbjct: 407 EELLMLGVRLREGLNVSAFAERTGMKIPSTAIDTLVNEGLLTRSDDA-LIATLRGRLLND 465

Query: 388 SVIANLA 394
            VI  L 
Sbjct: 466 LVIERLM 472


>gi|183601578|ref|ZP_02962948.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|241190923|ref|YP_002968317.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196329|ref|YP_002969884.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183219184|gb|EDT89825.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|240249315|gb|ACS46255.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250883|gb|ACS47822.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793912|gb|ADG33447.1| Coproporphyrinogen III oxidase [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 437

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 130/427 (30%), Positives = 192/427 (44%), Gaps = 38/427 (8%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQ- 60
           +    +     S    VYVH PFC+++C YCDFN++          + N+    + EM+ 
Sbjct: 6   APLTAHPPASASMPFEVYVHVPFCIRRCGYCDFNTYTALDLGEGASRANYATLAIREMRV 65

Query: 61  ----WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                +         S++FFGGGTP+L+   ++  +LD + + W +  + EIT EANP S
Sbjct: 66  VHEWQLAHGVVEPPASTVFFGGGTPTLLPAGDLVAMLDAVREIWGIREDAEITTEANPDS 125

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
           V+    +  R  G  RIS G+QS     LR L R HN S   A +  A  +    S DLI
Sbjct: 126 VDPGYLRLLRDGGFTRISFGMQSSVPHVLRTLDRTHNPSNVAADVEAAHRLGLETSVDLI 185

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P +++  W   ++ A+   V H+S Y LT+E  T   +    G++  P ++     Y
Sbjct: 186 YGAPGESIEDWCDSVRSAIDLGVHHISAYALTVEPHTKMGRRIAAGEIEAPDDDDEATKY 245

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR---- 292
            L   + SA GL  YEISN +  G ES HNL YWR  D+ GIGPGAHS            
Sbjct: 246 ELADQLLSAAGLEWYEISNWARPGHESRHNLGYWRNVDWAGIGPGAHSHYNAVRRMDMGI 305

Query: 293 -------------------------VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
                                    +      HP  W   ++ N     + E +  ++ A
Sbjct: 306 GHDPKAGIPVGANGQGYPARDTWTSMRAWDIPHPRVWAVALQHNRVPWQDFELIDCDENA 365

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLD 387
           +E LM+G+RLREG++V  +    G  +       L  +G + R   + L  T RG  + D
Sbjct: 366 EELLMLGVRLREGLNVSAFAERTGMKIPSTAIDTLVNEGLLTRSDDA-LIATLRGRLLND 424

Query: 388 SVIANLA 394
            VI  L 
Sbjct: 425 LVIERLM 431


>gi|332686760|ref|YP_004456534.1| putative coproporphyrinogen III oxidase [Melissococcus plutonius
           ATCC 35311]
 gi|332370769|dbj|BAK21725.1| putative coproporphyrinogen III oxidase of BSHemN-type,
           oxygen-independent, in heatshock gene cluster
           [Melissococcus plutonius ATCC 35311]
          Length = 384

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 114/380 (30%), Positives = 194/380 (51%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  + + +   + +++S L E++ +        + +++ GGG
Sbjct: 11  SAYIHIPFCEHICYYCDFNKVLIKEQ-PVDRYLESLLKEIELVTGNV-SCELETLYIGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +L GI K +T S+ +E T+EANP  +     Q  +  GVNR+S+GVQS
Sbjct: 69  TPSALSSKQLDYLLSGIIKQFTFSNTIEFTVEANPGDLTPEKIQIMKNYGVNRLSMGVQS 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + Q L+ +GR H   E   AI       F  +S DLIYALP QT+  ++  L +A+   
Sbjct: 129 FDNQILKKIGRKHTVKEIYQAIQRLEKANFNNISIDLIYALPGQTLENFKESLCKAIELN 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H +LY L +E  T+F  + + G +  PSE++ V +      +    G   YEISN + 
Sbjct: 189 LPHYALYSLILENQTMFMNLARQGKIHFPSEDIEVSMLKSAIQLMEEAGRRHYEISNFAI 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW    Y G G GA   +    ++    I    + +L  +  N   ++E+
Sbjct: 249 PGKESRHNTRYWDNEHYYGFGAGASGYIDNLRYKNHGPI----QHYLMPLEDNQLPIIER 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L ++ Q +E + +GLR+++G+S + +    G +++    E  + L+ +  I   Q + 
Sbjct: 305 EELLTKHQIEEEMFLGLRMKKGVSKEKFYQKFGVSMESIYGETIQQLKIRKLIYE-QTNS 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T  G+ + + V     +
Sbjct: 364 IALTSEGIFLGNEVFEAFLL 383


>gi|260881517|ref|ZP_05404601.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Mitsuokella multacida DSM 20544]
 gi|260848644|gb|EEX68651.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mitsuokella multacida DSM 20544]
          Length = 383

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 198/382 (51%), Gaps = 12/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFG 77
           G+Y+H PFC +KC YCDF S   R +  + ++  +   E+     L   +  S  +I+ G
Sbjct: 8   GLYIHIPFCRQKCFYCDFPSFAGRER-YEADYTDALCRELAVQGVLYREKWGSPRTIYMG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  IL  IA  +  +++ E T+E NP +V+    +  R  GVNR+S GV
Sbjct: 67  GGTPSLLPTGLLEKILQAIADVFGDAADREFTVECNPGTVDAAKLRALRAGGVNRLSFGV 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ ++  L+ +GR H  ++A  A+ LAR   F  +S DLIY LP +++   E +L+  ++
Sbjct: 127 QTFDDTLLKKIGRIHTGAQAREAMALARAAGFQNVSMDLIYGLPGESLADLERDLEAMVA 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S+Y L +E+GT F KM + G L LP E+    +Y+   +   AHG   YEISN 
Sbjct: 187 LEPEHISIYGLQLEEGTAFAKMQEMGRLALPDEDTVERMYDTMTAFLPAHGYARYEISNF 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HNL+YW+   Y+G+G  AHS ++   +     I     ++++ +R       
Sbjct: 247 AKPGFESCHNLSYWQDVSYLGVGAAAHSYLEGQRYENVREIP----AYIEGIRTGKGVRR 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
           ++E ++ E   +EF  + LR   GI    +E   G  L+         L+RQG +E  + 
Sbjct: 303 QEEAMTREIAMEEFAFLALRTACGIDRARFERRFGMPLEAVYAGAIAKLKRQGLLEADEA 362

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             +  T  GM   +       +
Sbjct: 363 G-VHLTPLGMKYGNMAFEEFLL 383


>gi|302874297|ref|YP_003842930.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulovorans 743B]
 gi|307689438|ref|ZP_07631884.1| coproporphyrinogen III oxidase [Clostridium cellulovorans 743B]
 gi|302577154|gb|ADL51166.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           cellulovorans 743B]
          Length = 373

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 124/380 (32%), Positives = 207/380 (54%), Gaps = 15/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KC YCDF S   +  +  E +I S + EM           + +IF GGG
Sbjct: 3   SLYIHIPFCKNKCLYCDFKSFEGKENL-MEQYIDSLIVEMSLRV----SEKVQNIFIGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ ++ ++I  + + I K    + N E T+E NP +        ++  GVNR+S+G+Q+
Sbjct: 58  TPTFLKEEHIKSLGEAIKKIQK-AENYEFTVEGNPGTFTREKLLLFKDMGVNRLSIGLQA 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ LGR HN  E IA+  LAR I F  ++ DL++ LP QT+  W   L++ +   
Sbjct: 117 WQNSLLKVLGRIHNNDEFIASYKLAREIGFNNINIDLMFGLPNQTIDMWMDTLEKVVDLN 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS+Y L IE+GT FY +++ G L++P+E    ++YN  ++   + G   YEISN+S 
Sbjct: 177 PEHLSIYSLIIEEGTSFYDLNEKGKLLVPTEEEEREMYNKAKTFLESKGYKQYEISNYSK 236

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           LG+E  HNL YW   +YIG G  AHS +    +     I    E ++  +++   AV E 
Sbjct: 237 LGSECKHNLVYWELNEYIGCGSAAHSYIDGKRYENLSCI----EEYIDAIKEKAEAVKEV 292

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
              S E   +E++ MGLR  +GIS++D++   G++++    E     +  G +  V    
Sbjct: 293 IINSEEDNIEEYIFMGLRKIQGISLQDFKNRFGKDINEIYPEIINRHKSAGLL-IVNDEN 351

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +R ++ G+ + + V+++  +
Sbjct: 352 IRLSENGIELSNIVMSDFIL 371


>gi|311113638|ref|YP_003984860.1| coproporphyrinogen III oxidase [Rothia dentocariosa ATCC 17931]
 gi|310945132|gb|ADP41426.1| coproporphyrinogen III oxidase [Rothia dentocariosa ATCC 17931]
          Length = 423

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 119/401 (29%), Positives = 190/401 (47%), Gaps = 22/401 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTG- 67
            G  +    +YVH PFC  +C YCDFN++        +G   +    + E+ +  +    
Sbjct: 23  HGCQNRDFSLYVHIPFCSVRCGYCDFNTYATEDFGDGIGLGTYADDAIAEIFFAARALEA 82

Query: 68  ----PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R + ++FFGGGTP+ +   ++  IL      + +    E+T EANP SV   + Q
Sbjct: 83  SGVVKRPLHTVFFGGGTPTKLPAYDLVRILRTAIDIFGIEDGAEVTTEANPDSVTYEDLQ 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             +  G  R+S G+QS+  + L+ L R H        +  AR+I  ++S DLIY  P +T
Sbjct: 143 TLKDGGFTRVSFGMQSVVPEVLKVLDRTHTPENVPKVVAWARDIGLQVSIDLIYGSPSET 202

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + QWE  +Q A+SY  DH+S Y L +E GT      + G+  +P +++  D+Y   + + 
Sbjct: 203 LEQWEQSVQAAISYQPDHISAYSLIVEDGTKLAAQIRRGEYTMPDDDLMADMYLRAEDLL 262

Query: 244 SAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
              G   YE+SN+S      S HN+ YWR  D+ GIGPGAHS +            KHP 
Sbjct: 263 MQAGYRWYEVSNYSRSEHTRSDHNMAYWRNQDWWGIGPGAHSHINGTR----WWNIKHPV 318

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            +   VR        +E L S+ ++ E +M+ +R+REG+ + +   +          R L
Sbjct: 319 PYAHRVRAGQSPAAAREILDSDSRSFETIMLLIRVREGLPMHELLAVHPAADLGSSLRWL 378

Query: 363 QRQGFIE---------RVQFSRLRCTQRGMTMLDSVIANLA 394
             QG IE             + ++ T +G  + D+V   L 
Sbjct: 379 LSQGLIESDIFTDTGMPNPDASVKLTLQGRLLGDAVTRELL 419


>gi|225573017|ref|ZP_03781772.1| hypothetical protein RUMHYD_01208 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039631|gb|EEG49877.1| hypothetical protein RUMHYD_01208 [Blautia hydrogenotrophica DSM
           10507]
          Length = 387

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 212/383 (55%), Gaps = 16/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIF 75
            L +YVH PFCVKKC YCDF S      + +  ++Q+ L E++ +  R+      + SIF
Sbjct: 14  PLEIYVHLPFCVKKCDYCDFLSGPYSEDI-RSAYVQAVLKEIRSLGRRERAENWKVRSIF 72

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + I  ILD I +++      EI++EANP ++  N  + Y+  G+NR+SL
Sbjct: 73  FGGGTPSLMNGEEITQILDEIRRDFQFEPEAEISLEANPGTLTENKLKAYQSGGINRLSL 132

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G QS ++Q L+ LGR H   E + + H+AR   F  ++ DL+  +P Q++  WE  L+  
Sbjct: 133 GCQSAKDQELKRLGRIHTWEEFLKSYHMAREAGFQNINVDLMSGIPGQSVLDWEENLEAV 192

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   +H+S Y L +E+GT FY+     +L LP E+    +Y  T+ I   HG H YEIS
Sbjct: 193 LALTPEHISAYSLIVEEGTPFYER----ELNLPDEDSERRMYERTREILEEHGYHQYEIS 248

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G E LHNL YW+   Y+G+G GA S  K   +          + +L         
Sbjct: 249 NYALRGKECLHNLGYWQRVSYLGVGLGAASLRKNVRYCNTS----DLKEYLAHGADLDVL 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
             ++E L+  ++ +EFL +GLR+ +GI  +++    GR L+          ++ G +ER+
Sbjct: 305 QKQREVLTQREEMEEFLFLGLRMIQGIREEEFLKNFGRPLEEAYGNVIEKHEKLGLLERL 364

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              RLR T+RG+++ + V  +  
Sbjct: 365 D-GRLRLTRRGISLSNQVFVDFL 386


>gi|320533979|ref|ZP_08034539.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133809|gb|EFW26197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 428

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 117/405 (28%), Positives = 186/405 (45%), Gaps = 27/405 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGP 68
            G       VY+H P+C  +C YCDFN++           E+F+ +   E++  R+    
Sbjct: 26  PGGAERPFSVYLHVPYCQVRCGYCDFNTYTNLTMGQGASAEDFVGTLAGELRAARRAMDG 85

Query: 69  -----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                RS  ++F GGGTP+++   ++  +L+ + + + +++N E+T EANP SV+     
Sbjct: 86  VGLPVRSARTVFVGGGTPTMLPASDLVSMLELVRECFGLAANAEVTTEANPDSVDEAGLA 145

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              + G +R+S G+QS     L+ L R H  +     +  AR      S DLIY  P ++
Sbjct: 146 ALAEGGFSRVSFGMQSAVPHVLKVLERTHEPARVPRVVEWARRTGLSTSLDLIYGAPGES 205

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W+  L      + DH+S Y L IE+GT  +   + G+L +P ++     Y +  ++ 
Sbjct: 206 LEDWQRSLDAVTRISPDHVSAYALVIEEGTRMWGQVRRGELPMPEDDDEATKYEMADAVL 265

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN +  GAE  HN  YW   D+ G GPGAHS +      V +   KHP +
Sbjct: 266 RQAGYEWYEISNWARPGAECRHNQAYWLDWDWWGAGPGAHSHLGD----VRLWNTKHPVA 321

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK-----------DWEMLAGR 352
           W   +      V   E + ++ +  E +M+G+RLREGI +            D    AG 
Sbjct: 322 WAGQIATGHLPVAGHEAIDADSRELERIMLGIRLREGIELASLGSGPSGPPTDLPDAAGA 381

Query: 353 NLD--IECERNLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
                +     L   G ++       R   T RG  M D+V   L
Sbjct: 382 TPPHLVPVVAGLVADGLLDASAAMRGRAVLTLRGRLMADTVTRAL 426


>gi|111018259|ref|YP_701231.1| coproporphyrinogen III oxidase [Rhodococcus jostii RHA1]
 gi|110817789|gb|ABG93073.1| probable O2-independent coproporphyrinogen III oxidase [Rhodococcus
           jostii RHA1]
          Length = 420

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 120/392 (30%), Positives = 184/392 (46%), Gaps = 19/392 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL 65
           + + G GS   G+YVH PFC  +C YCDFN++           +++++    E+    ++
Sbjct: 35  SALKGVGSRPFGIYVHVPFCATRCGYCDFNTYTAGELGTSASPQSWMEGLRRELDLAAEM 94

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           TG  ++ ++F GGGTPSL+    ++ +L  +  ++ ++   E+T E+NP S     F+  
Sbjct: 95  TGAPAVDTVFVGGGTPSLLGGDGLSDVLGAVRSSFGIAKGAEVTTESNPESTSPEFFERL 154

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTM 184
           R  G  RISLG+QS  +  LR L R H       AA       F  ++ DLIY  P +  
Sbjct: 155 RAGGFTRISLGMQSAAQHVLRVLDRTHTPGRAVAAAQEARAAGFEHVNLDLIYGTPGERD 214

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              ++ L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    +  +
Sbjct: 215 EDLDLSLDAVLSAGVDHVSAYALIVEDGTALARKVRRGELPAPDDDVLASRYERIDARLA 274

Query: 245 AHGLHAYEISNHSFLGA-----ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
             GL  YE+SN +   A        HNL YW  GD+ G GPGAHS V      V     K
Sbjct: 275 DAGLTWYEVSNWASADAATGESRCRHNLGYWDDGDWWGAGPGAHSHVGG----VRWWNVK 330

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP  +   +      V   E L++E    E +M+  RLR G+ V + +       +    
Sbjct: 331 HPARYADQLAAGSLPVGGSEQLTAEDVHVERVMLTARLRTGLPVAELDA-----AEQHAA 385

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             +   G + R Q   L  T RG  + D+V+ 
Sbjct: 386 ETVVADGLLVR-QGQHLVLTDRGRLLADAVVR 416


>gi|256839178|ref|ZP_05544688.1| coproporphyrinogen III oxidase [Parabacteroides sp. D13]
 gi|298374724|ref|ZP_06984682.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_19]
 gi|256740097|gb|EEU53421.1| coproporphyrinogen III oxidase [Parabacteroides sp. D13]
 gi|298269092|gb|EFI10747.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_19]
          Length = 375

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 125/379 (32%), Positives = 203/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S+       +E +I + + EM+  +   G  ++ +I+FGGG
Sbjct: 3   GLYIHVPFCAKRCLYCDFFSNT--EMKYKEPYINALIKEMELRKGYIGNEALETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I + I +++ V+  +EIT+EANP  ++       R    NR+S+GVQS
Sbjct: 61  TPSQLDEKDFGKIFEAIYRHFDVAEQMEITLEANPDDMKREYVSLLRNYPFNRVSMGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + LRFL R H+  +AI A+ L +      +S DLIY LP QT   WE  L++A+   
Sbjct: 121 FHPEDLRFLNRRHDRQQAIKAVELCKEYGITNISIDLIYGLPNQTQQAWEENLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y L  E+GT  YK+ + G +   +E ++V  ++      +  G   YEISN + 
Sbjct: 181 VPHLSAYHLIYEEGTALYKLLEAGKVTPINEELSVSFFSTLIDRLAEAGYLHYEISNFTR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+GP AHS   +       S+  + +       +NGH  +E 
Sbjct: 241 PGFFSKHNSSYWTGKKYLGLGPSAHSYNGIDREWNPSSLPIYIDGI-----ENGHPTIES 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++ GLR   G+S  D +   GR L   C++  Q    QG + +    +
Sbjct: 296 EDLDLCTRYNDFIITGLRTMWGVSFADIQTKFGRKLLSYCQKQAQPHINQGLLLQTD-DK 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  ++ G+ + D ++++L 
Sbjct: 355 LILSKSGIFVSDGIMSDLL 373


>gi|254468648|ref|ZP_05082054.1| putative oxygen-independent coproporphyrinogen III oxidase [beta
           proteobacterium KB13]
 gi|207087458|gb|EDZ64741.1| putative oxygen-independent coproporphyrinogen III oxidase [beta
           proteobacterium KB13]
          Length = 381

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 208/383 (54%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSI 74
           S+GVYVH P+C+ KCPYCDFNSH    +     +E ++ + + E  + + L   R I+SI
Sbjct: 7   SVGVYVHLPWCIHKCPYCDFNSHEASQEKVRSLEEEYVDTLIEEFNFYQDLIKERIITSI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSLI P+     +  I KN+ +S   EIT+EANP ++++  FQ Y   G+NR+S
Sbjct: 67  FFGGGTPSLISPKLFEKFITAIHKNFDLSKT-EITLEANPGTIDIKYFQSYADLGINRVS 125

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS  +  L+ L R H++ EA  AI + +  F   + DL++ LP Q++ +   ++  A
Sbjct: 126 LGIQSFNDNHLQSLERIHSSEEAKQAIVVVKKYFKNFNLDLMFGLPNQSLAELTEDIDTA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S+  +HLS Y LTIE  T F+K        +PS++ A ++ +L            YE S
Sbjct: 186 ISFNPNHLSFYHLTIEPQTRFFK----SKPEIPSDDDAYEMLSLVLKQLKNSHFDHYETS 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
             +    +  HNLNYW +GDY+GIG GAHS++   +    +   K+P+ ++  V K    
Sbjct: 242 AFAQPDHQCRHNLNYWTFGDYLGIGAGAHSKLTHENEIFRMDNTKNPKQYITEVAKQNFF 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
             +   +  +    EFLM  LRL  G + + +    G +LD    +   + Q+    E  
Sbjct: 302 PNKT-LIPQQDLPFEFLMNALRLTHGFTKETYSQRTGLSLDDVKSKLHPSFQQDLLYE-- 358

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               L+ T++G+  L+ ++ NL 
Sbjct: 359 DHEILKPTEKGVLFLNEILHNLI 381


>gi|319778260|ref|YP_004129173.1| Radical SAM family enzyme,coproporphyrinogen III oxidase like
           protein [Taylorella equigenitalis MCE9]
 gi|317108284|gb|ADU91030.1| Radical SAM family enzyme,coproporphyrinogen III oxidase like
           protein [Taylorella equigenitalis MCE9]
          Length = 394

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 218/383 (56%), Gaps = 9/383 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            L +Y+H P+C++KCPYCDFNSH     ++ +E ++++   ++ +       RSI S+F 
Sbjct: 16  PLSIYIHTPWCIRKCPYCDFNSHETTEIELPEEQYLKALEEDLIYNLPHIWGRSIISVFI 75

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + I  IL  +     +SS +EIT+EANP++ E   F  YR +G+NR+S+G
Sbjct: 76  GGGTPSILSTKTIDRILQILRNLLNISSEIEITLEANPATFESEKFAAYRSSGINRLSIG 135

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS   ++L+ LGR H++  AI A  +A+  F   + D++YALP Q++ + E ++  AL 
Sbjct: 136 IQSFNNKNLQALGRVHDSQSAINACEIAKKFFDNFNLDIMYALPDQSLKECEEDIILALQ 195

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLSLYQLT+E  TLF K       +LPSE+  +D+  +   +T+  G   YEIS +
Sbjct: 196 LESKHLSLYQLTLEPNTLFSKFPPK---ILPSEDEIIDMEEMIHELTALRGFKRYEISAY 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--MVRKNGHA 314
           +  G + +HN NYW +GDY+GIGPGAHS++      +    EKHP  W+K  M  + G  
Sbjct: 253 ALDGWQCIHNRNYWEFGDYVGIGPGAHSKISFPDKIIREVREKHPIKWIKKCMSDQKGAQ 312

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQ 372
           ++E   L  E+   EF++  LRL++G+    +E   G ++ +     +    +G + +  
Sbjct: 313 IIEHRELKVEELPFEFMLNALRLKDGVPTNYFEERCGVSMAVALPNIKRAVDKGLLSQNP 372

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
               + T  G   L+++     +
Sbjct: 373 LE-FKATDLGWKYLNNLQEIFLI 394


>gi|229552410|ref|ZP_04441135.1| coproporphyrinogen dehydrogenase [Lactobacillus rhamnosus LMS2-1]
 gi|258539779|ref|YP_003174278.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus Lc 705]
 gi|229314236|gb|EEN80209.1| coproporphyrinogen dehydrogenase [Lactobacillus rhamnosus LMS2-1]
 gi|257151455|emb|CAR90427.1| Oxygen-independent coproporphyrinogen III oxidase [Lactobacillus
           rhamnosus Lc 705]
          Length = 381

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 12/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G Y+H PFC   C YCDFN  V       ++++   L EM+ +        I +++ GGG
Sbjct: 3   GAYIHIPFCEHICYYCDFNK-VFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIETVYVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQ 138
           TP+ + PQ +A++  GI          E T EANP+ +   +  Q     GVNR+S+GVQ
Sbjct: 62  TPTTLTPQQLAVLCQGIRDILHFDHG-EFTFEANPNDLLTTDKLQVLHDFGVNRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ +GR H A +   AI  AR   F  +S DLI+ LP Q+   +   LQ+AL+ 
Sbjct: 121 SFNDDVLKRIGRIHRAKDVYTAIGNARKVGFDNLSIDLIFRLPDQSRDDFLNSLQKALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN +
Sbjct: 181 DLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNL YW+   Y G G GA   +    +     I    + +L  +  +   V+ 
Sbjct: 241 KTGYQCRHNLLYWQNDKYFGFGAGAFGYLGRDRYHNYGPI----KQYLAPLHADHLPVLA 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              +   +Q +E + +GLR   G++   +       +D    E    L+ QG IER Q  
Sbjct: 297 HHLVPVSEQIEEEMFLGLRTMAGVNEDRFYRRYHMTVDAVYGETVPELESQGLIER-QNG 355

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T RG  + + V     +
Sbjct: 356 YIRLTNRGKFLGNEVFQQFLL 376


>gi|193076228|gb|ABO10856.2| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter baumannii ATCC 17978]
          Length = 384

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 132/394 (33%), Positives = 211/394 (53%), Gaps = 18/394 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +    + + +        + EIT+EANP ++E + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAKGYVWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARRAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKTAVEHGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S+HNLNYW++GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSVHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +L  V      + + E   +++   EF+M  LRL +G+  + +E   G +LD   +    
Sbjct: 296 YLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTS 352

Query: 364 ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              R+  +E     RL CT++G   L+SV+    
Sbjct: 353 LRSRELLVE--DSGRLACTEQGHIFLNSVLEEFL 384


>gi|238916676|ref|YP_002930193.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
 gi|238872036|gb|ACR71746.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
          Length = 385

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 194/380 (51%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFCV KC YCDF S      V    + ++ + E++          I+SIFFGGG
Sbjct: 9   GIYIHIPFCVHKCIYCDFLSAPAGDAVKYA-YTRALINEIRNTADRQVKDKITSIFFGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    IA IL  +   + +S + EIT+E NP +V  +    YR AGVNR+S G+QS
Sbjct: 68  TPSVLPDGCIADILSAVRDCFDISDDAEITMECNPGTVNESRLSEYRAAGVNRLSFGLQS 127

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ LGR H   +   +  LAR+  F  ++ DL+ A+P QT    E    + ++  
Sbjct: 128 ADNNELKMLGRIHTFEQFEESFRLARDAGFNNINVDLMSAIPGQTEATLENTFDKVMALQ 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L +E+GT            +P E     +Y++T+ I    G   YEISN+S 
Sbjct: 188 PEHISVYSLILEEGTYLADNIDKF-PPVPDEEEDRRMYHITKQILENAGYERYEISNYSR 246

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW  G+Y G G  A        +    S  +    ++++    G      
Sbjct: 247 PGFECRHNLLYWNRGEYYGFGCSAAGFTGNERY----SDIRDVREYIELNGDIGKLHENI 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           E L+ E   +EF+ +GLR   G+ VKD++   G +++    +  +R   +G + + +   
Sbjct: 303 EILTKEDAMEEFMFLGLRKVAGVDVKDFQNRFGVSINDVYAKETERNINKGLLVK-RGDM 361

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T+ GM + ++V+++  +
Sbjct: 362 LRLTEYGMDICNTVMSDFIL 381


>gi|332670862|ref|YP_004453870.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           fimi ATCC 484]
 gi|332339900|gb|AEE46483.1| oxygen-independent coproporphyrinogen III oxidase [Cellulomonas
           fimi ATCC 484]
          Length = 417

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 125/402 (31%), Positives = 193/402 (48%), Gaps = 29/402 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT--- 66
           G  + + GVY+H PFC  +C YCDFN++      G   Q+ +  + L E+     +    
Sbjct: 24  GAAARAFGVYLHVPFCTVRCGYCDFNTYTATELGGGASQDAYAATALAEVGLAAHVLDAA 83

Query: 67  --GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R++S++F GGGTP+++   ++A +L G+   W ++ + E+T EANP SV   +   
Sbjct: 84  GLPARAVSTVFVGGGTPTVLPVDDLARLLGGVRDTWGLTPDAEVTTEANPDSVTPASLAA 143

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AG  R+S G+QS     L  L R H+       +  AR+    +S DLIY  P +++
Sbjct: 144 LAAAGFTRVSFGMQSAVPHVLATLERTHDPRRIPDVVRWARDAGLAVSLDLIYGTPGESL 203

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   ++ AL+  VDH+S Y L +E+GT      + G+L LP  +     Y L   + +
Sbjct: 204 DDWRASVETALATGVDHVSAYALVVEQGTRMAVQVRRGELALPDADDQAAKYELADDLLT 263

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GL  YE+SN +   A+   HNL YWR  D+ G+GPGAHS V      V     KHP +
Sbjct: 264 AAGLAWYEVSNWARTPADACRHNLAYWRGDDWWGVGPGAHSHVGG----VRWWNVKHPRA 319

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   + +       +E +  E  A E LM+G+R   G+ V D    A R         L 
Sbjct: 320 YADRLARGLSPAAGREVVDGESAALERLMLGVRTAHGLPVADLSPDARR-----AVAGLV 374

Query: 364 RQGFIE-------RVQFS----RLRCTQRGMTMLDSVIANLA 394
             G ++                R+  T+RG  + D+V+  LA
Sbjct: 375 ADGLVDGRAALARPTADDPVGPRVLLTRRGRLLADAVVRALA 416


>gi|168187878|ref|ZP_02622513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum C str. Eklund]
 gi|169294256|gb|EDS76389.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum C str. Eklund]
          Length = 375

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 199/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N   +Y+H PFC +KC YCDF S+  R +    ++ ++   E+  ++     + I++IF
Sbjct: 2   NNEASLYIHIPFCKQKCLYCDFTSYCGR-ENRMVDYSRALSKEIDQIK----NKKINTIF 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  Q    IL         S ++E T+E+NP + +    +  +  GVNRIS+
Sbjct: 57  IGGGTPTYLCLQG-WNILKKSIDKLEKSIDLEFTVESNPRTFDEEKLKFLKSIGVNRISI 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ +++ L+ LGR H   E + + H+AR I F  ++ DL++ +P QT+  W+  L   
Sbjct: 116 GLQAWQDKHLKSLGRIHTKDEFLKSYHMARQIGFKNINVDLMFGIPNQTLADWKETLLEV 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                +HLS Y L IE+GT FY  ++   + LPSE +   +Y+ T     + G   YEIS
Sbjct: 176 TKLNPEHLSCYSLIIEEGTPFYDFYEKNKIELPSEELERKMYDYTLKFLESKGYKQYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S    E  HNL YW   +YIG G  +HS V    +R     E+  E ++  + KN   
Sbjct: 236 NFSKEKYECRHNLVYWNLNEYIGCGAASHSYVDGYRYRN----EEDIEKYIDSIEKNKSP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERV 371
           +VEK   S +   +EF+ MGLR  +GIS+K++     +   +L     +     G +   
Sbjct: 292 IVEKIKTSLKSDIEEFIFMGLRKIKGISIKEFHKRFNKEIYDLYGTVIKTHISNGLLVEK 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               L  + +G+ + + V+++  +
Sbjct: 352 D-DYLYLSHKGIEVSNYVLSDFIL 374


>gi|260556243|ref|ZP_05828462.1| coproporphyrinogen III oxidase [Acinetobacter baumannii ATCC 19606]
 gi|260410298|gb|EEX03597.1| coproporphyrinogen III oxidase [Acinetobacter baumannii ATCC 19606]
          Length = 384

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 133/394 (33%), Positives = 210/394 (53%), Gaps = 18/394 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKTAVEHGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +L  V      + + E   +++   EF+M  LRL +G+  + +E   G  LD   +    
Sbjct: 296 YLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELYEQRTGLILDDLNDLLTS 352

Query: 364 ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              R+  +E     RL CT++G   L+SV+    
Sbjct: 353 LRSRELLVE--DSGRLACTEQGHIFLNSVLEEFL 384


>gi|238787376|ref|ZP_04631175.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia frederiksenii ATCC 33641]
 gi|238724638|gb|EEQ16279.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 204/371 (54%), Gaps = 17/371 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + +
Sbjct: 2   QKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVSLVDGREISTIFIGGGTPSLLSAEAM 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +LDG+     V+ + EIT+EANP +VE + F GY++AG+NRIS+GVQS   + L  LG
Sbjct: 62  QQLLDGVRARLPVALDAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAEKLTRLG 121

Query: 150 RNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   EA  A  LA ++  R  + DL++ LP Q++ +   +L++A++    HLS YQLT
Sbjct: 122 RIHGPEEAKRAAELATSLNLRSFNLDLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T F          LP ++   D++     + SA G   YE S ++  G +  HNLN
Sbjct: 182 IEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YWR+GDY+GIG GAH ++     R+  +I+ KHP  +++     G  + ++  + +  + 
Sbjct: 238 YWRFGDYLGIGCGAHGKITFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVETADRP 292

Query: 328 DEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
            EF M   RL E     D+    G     +  + +  L ++  IE  Q+   + T++G  
Sbjct: 293 FEFFMNRFRLLEAAPRADFTHFTGLAESTIRPQLDEALAKEYLIETEQY--WQITEKGKL 350

Query: 385 MLDSVIANLAV 395
            L+S++  L +
Sbjct: 351 FLNSLL-ELFL 360


>gi|189424293|ref|YP_001951470.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           lovleyi SZ]
 gi|189420552|gb|ACD94950.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           lovleyi SZ]
          Length = 380

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 133/379 (35%), Positives = 203/379 (53%), Gaps = 8/379 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGG 79
           +Y+H P+C+ KC YC F+S         E      L EM+    +    + + S++FGGG
Sbjct: 5   LYIHIPWCLSKCGYCAFSSRPLEPHQ-LEQTCHLLLREMELAATVYPLNQPLRSLYFGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P+ ++ ++ G    +  SS +EIT+EANP +V +++  GY +AGV+R+SLG QS
Sbjct: 64  TPSLLDPEQVSRLISGSQALFGHSSTIEITLEANPGTVSLDSLTGYYQAGVSRLSLGAQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +Q L+ LGR H A E   A  LA+   F  +  DLI  LP QTMT W+ +L  AL+  
Sbjct: 124 FNDQLLQTLGRRHTAVETCNAFQLAQQAGFSSIGLDLICGLPDQTMTDWQQDLAAALALQ 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS+Y LTIE+ T F   +  G   LP  +++  +     S  +A G   YEI+N + 
Sbjct: 184 PDHLSVYGLTIEEETPFAGRYPVGSDALPDHDLSAGMLEEADSRLTAAGYDHYEIANFAR 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+GIGPGAHS ++     +    +   E+W   +     A  E+
Sbjct: 244 PGCRSQHNCGYWQRDGYLGIGPGAHSFLRQ-EWGIRWGNQSVFETWAAAIHDRKLAATEQ 302

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
           + L+ E    E++ +GLR+ +GIS+  +    G  L+    E    LQ+ G +   Q  R
Sbjct: 303 QELTREDALSEYIFLGLRMADGISLNGFAEEFGERLEHRFSEAIHQLQQAGLLTCSQ-DR 361

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T++GM + + V     
Sbjct: 362 LCLTKQGMLLSNQVFVRFL 380


>gi|90023291|ref|YP_529118.1| coproporphyrinogen III oxidase, anaerobic [Saccharophagus degradans
           2-40]
 gi|89952891|gb|ABD82906.1| coproporphyrinogen III oxidase, anaerobic [Saccharophagus degradans
           2-40]
          Length = 400

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 133/393 (33%), Positives = 197/393 (50%), Gaps = 15/393 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T      L +YVH P+CV+KCPYCDFNSH    ++  ++++     ++         R I
Sbjct: 13  TPTALPPLSLYVHIPWCVRKCPYCDFNSHAAPSELPIDDYLACLKQDLLHDLDQVQGRKI 72

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTPSL     I  +L  +A      +  EIT+EANP + E  NF   R  GVN
Sbjct: 73  HSVFFGGGTPSLFPGVAIGDLLAFVADKIGFEAGAEITLEANPGTAERGNFTSLRMEGVN 132

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQS  +  L+ LGR H   EA+ A  LAR+  F  ++ DL++ LP+QT  Q   +
Sbjct: 133 RLSLGVQSFNDDHLQRLGRIHGRDEALNAFQLARDAGFNNINIDLMHGLPEQTPEQGLSD 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ+A+    +H+S YQLTIE  T FY        VLP E+    +  L      + G   
Sbjct: 193 LQQAIGLGPEHISWYQLTIEPNTHFYS----HTPVLPLEDTLESIQELGHEALQSAGYLR 248

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR----VKVGSHRVAISIEKHPESWLK 306
           YE S ++     S HNLNYW++GDY+ IG GAH +       G         + P+ +L 
Sbjct: 249 YETSAYAQNAKRSAHNLNYWQFGDYLAIGAGAHGKNTTLTPNGLVISRNRKTRLPKDYLA 308

Query: 307 MVR--KNGHAV-VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERN 361
             +   NG+    ++  +   Q   EF+M  LRL +G+    +    G  L+   +   +
Sbjct: 309 AAKSTANGNPFCAKQSLIDPSQLPLEFMMNALRLMDGVKASTYFERTGLALEPLAQTLAD 368

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L+ QG +     + L  T+ G   L++++    
Sbjct: 369 LRAQGLM-IDNPNTLANTELGHRYLNAILERFL 400


>gi|182626898|ref|ZP_02954632.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens D str. JGS1721]
 gi|177907748|gb|EDT70360.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium perfringens D str. JGS1721]
          Length = 377

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 115/383 (30%), Positives = 204/383 (53%), Gaps = 11/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + + +Y+H PFC +KC YCDF S  R+  + +  +I++   E+  +R+      I++IF 
Sbjct: 2   DKISLYIHIPFCAQKCLYCDFPSFARKDHLRKA-YIEALNKEIISLREKHNNLEINTIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   +  +L  +AK   ++ +VE ++E NP ++     +  +K GVNRIS+G
Sbjct: 61  GGGTPSVLEADELECLLKEVAKL-NMAKDVEYSMECNPGNLTEEKLEVMKKYGVNRISMG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ ++  L+ LGR HN         LA+   F  ++ DL++ LP Q + +WE  L+  +
Sbjct: 120 LQAKQDNLLKGLGRIHNYKTFKENFLLAKKVGFNNINVDLMFGLPNQRLNEWEETLREII 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S Y L IE+GT FY ++++  L LP+E     +Y+L + I   +G + YEISN
Sbjct: 180 SLEPAHISAYSLIIEEGTAFYNLYENDKLKLPTEEEERKMYHLAKKILEENGFNQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++    E  HNL YW   ++IG+G  A S +     +   S+    E ++  + +   AV
Sbjct: 240 YAKERKECRHNLAYWNMDNWIGVGSAAASYINGKRIKNISSV----EEYINSINEKREAV 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E    S     +EF+ MGLR   GI   +++     N++    E       +G + R  
Sbjct: 296 EEIINNSKNDNMEEFMFMGLRKINGIDENEFKKRFSMNINDVYGEILNKYIDEGLLIR-D 354

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +  +++G+ + + ++A+  +
Sbjct: 355 SGMIFLSEKGIEISNIIMADFLL 377


>gi|118594151|ref|ZP_01551498.1| coproporphyrinogen III oxidase [Methylophilales bacterium HTCC2181]
 gi|118439929|gb|EAV46556.1| coproporphyrinogen III oxidase [Methylophilales bacterium HTCC2181]
          Length = 392

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 210/381 (55%), Gaps = 11/381 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSI 71
               L +YVH P+C+ KCPYCDFNSH  R    K  ++ +  + L ++      +G R+I
Sbjct: 11  DDKPLSIYVHIPWCIHKCPYCDFNSHELRNSSIKDQEQIYTDALLNQITLSADYSG-RTI 69

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIFFGGGTPSL  P+ I  I+  I+  +T++++ E+T+EANP +++   F+GY+  GVN
Sbjct: 70  HSIFFGGGTPSLFSPEAINRIILAISHQFTLANDCEVTLEANPGTIDKAYFKGYKDIGVN 129

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+SLG+QS     L+ L R H+  +A  A   AR +F  ++ DL++ALP QT +    ++
Sbjct: 130 RVSLGIQSFNNIHLKSLERIHDKEQAYEAAQWARQLFDNINLDLMFALPNQTKSDLIHDI 189

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + AL+   DH+S Y LTIE  TLF+K         P+E+ + D+ ++            Y
Sbjct: 190 KIALAIRPDHISYYHLTIEPNTLFHKHPPSQ----PNEDDSADMGDIIIETLKQQNFDHY 245

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRK 310
           E S  +       HN+NYW +GDY+G+G GAHS++ +  ++    S  K+P  +++ V+K
Sbjct: 246 ETSAFAKELKHCRHNMNYWEFGDYLGLGAGAHSKITLTDNQQKRFSCYKNPAQYIENVKK 305

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIE 369
           N    +E++ L   +   EF+M  LRL  G     +    G +LD I+ E ++ +   + 
Sbjct: 306 NT-PFIEEKLLVKNELIFEFMMNALRLNHGFKKNLFISSTGVSLDQIKGELDIAKDKGLL 364

Query: 370 RVQFSRLRCTQRGMTMLDSVI 390
                 ++ T  G   L+ ++
Sbjct: 365 IETSDIIKPTILGQQFLNELL 385


>gi|296170555|ref|ZP_06852139.1| coproporphyrinogen dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295894787|gb|EFG74512.1| coproporphyrinogen dehydrogenase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 390

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 120/384 (31%), Positives = 182/384 (47%), Gaps = 13/384 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           +        GVY+H PFC+ +C YCDFN++      G   + ++ +  TE+Q   +    
Sbjct: 13  LRPVPGRPFGVYIHVPFCITRCGYCDFNTYTPAELGGVNPDAWLAALRTELQLAAERLAG 72

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ ++F GGGTPSL+    +A +LD + +++ ++ + EIT EANP S   + F   R A
Sbjct: 73  PTVDTVFVGGGTPSLLGGARVASLLDMVREHFALAPDAEITTEANPESAWPDFFDAARAA 132

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+    L  L R H  +  A AA       F  +S DLIY  P ++    
Sbjct: 133 GYTRVSLGMQSVSPTVLGVLDRIHTPNRSAAAAREALDAGFEHVSLDLIYGTPGESDDDL 192

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L  A+   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  G
Sbjct: 193 LRSLDTAVETGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSEAG 252

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           L  YE+SN S  G E  HNL YW  G + G GPGAH  V      V     KHP ++ +M
Sbjct: 253 LTWYEVSNWSRPGGECRHNLGYWDGGQWWGAGPGAHGHVGA----VRWWNVKHPNAYAEM 308

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           + +    V   E L  +    E +++  RLR+G+             +          G 
Sbjct: 309 LARAALPVGGFELLDPDALHTEVVLLKTRLRQGLPHDVLN-----PAERRRAEGAVADGL 363

Query: 368 IERVQFSRLRCTQRGMTMLDSVIA 391
           +      R   T RG  + D+V+ 
Sbjct: 364 LVSAD-DRFVLTPRGRLLADAVVR 386


>gi|260174169|ref|ZP_05760581.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
          Length = 376

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 121/379 (31%), Positives = 198/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++++   E+   +       I +++FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTRYVRALCRELAMRKDYLKGEDIETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I  ++ +S   EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIRTHYGLSHCQEITLEANPDDLTSEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI A+H  R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDPTLKLLKRRHNAHTAIEAVHRCREAGFQNISIDLIYGLPGETKERWENDLRQAVSLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ ++D + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + +N  A  E 
Sbjct: 241 PGKYSRHNSSYWKGIPYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEENSRA-FEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C+R      + G +E    + 
Sbjct: 296 EYLDQTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQRMAAPYLKNGKLEEHDGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|157803377|ref|YP_001491926.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel]
 gi|157784640|gb|ABV73141.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel]
          Length = 386

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 159/384 (41%), Positives = 232/384 (60%), Gaps = 8/384 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           ++ L +Y+HWPFC+ KCPYCDFNSHV    +  E +++S+  E+++ + +   + I SIF
Sbjct: 5   TDDLSIYIHWPFCLSKCPYCDFNSHVAS-TIDHEQWLKSYEREIEYFKPIIQNKYIKSIF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL++P  + +I++ I     +    EIT+E NP+S E   F+ ++ AG+NR+S+
Sbjct: 64  FGGGTPSLMDPVIVEVIINKIINIAIIDHQTEITLETNPTSFETEKFKAFKSAGINRVSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+E  L+ LGR H+  +AI  I  A  IFPR+SFDLIYA   Q +  W+ EL++A+
Sbjct: 124 GVQSLKEDDLKKLGRTHDCMQAIKTIETANTIFPRVSFDLIYARSGQKLKDWQEELKQAM 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A  H+SLYQLTIEKGTLFYK+ +DG L+LP  + A ++Y  T     +     YEISN
Sbjct: 184 QLATSHISLYQLTIEKGTLFYKLFRDGTLILPHSDEAAEMYEWTNHYLESKKYFRYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHA 314
           ++ +  E LHNL YW Y  Y+GIGPGAHSR+   S  V AI +   PE WL  V+     
Sbjct: 244 YALVSQECLHNLTYWNYNSYLGIGPGAHSRIIEPSSSVLAIMMWHKPEKWLDSVKIKNVG 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIER 370
           +     L+ ++   E LMMGLRL+ GI++   E          LD+   ++ Q Q  I+ 
Sbjct: 304 IQTNIKLTHQEVIAEMLMMGLRLKSGINLSILEQKLNTKLENILDMNNLKHYQNQDLIKL 363

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            Q   +  T +G+ +   ++  L 
Sbjct: 364 DQN--VYLTDKGLMLHSYIVPRLI 385


>gi|329116701|ref|ZP_08245418.1| putative coproporphyrinogen dehydrogenase [Streptococcus parauberis
           NCFD 2020]
 gi|326907106|gb|EGE54020.1| putative coproporphyrinogen dehydrogenase [Streptococcus parauberis
           NCFD 2020]
          Length = 376

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 205/380 (53%), Gaps = 15/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             YVH PFC + C YCDF+    + +   ++++++ + E +      G + + +I+ GGG
Sbjct: 7   SAYVHIPFCTQICYYCDFSKVFIKNQ-PVDDYLRALIAEFRS----FGIKKLRTIYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ I  Q +  +L  + K+  +    E TIEANP  +  +  +  +K+ VNR+SLGVQ+
Sbjct: 62  TPTSITAQQLDYLLTELVKDLDLPYLEEFTIEANPGDLTPDKIEVMKKSAVNRVSLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ +GR+HN ++  + I  L    F  +S DLIYALP QT+ Q +  + +AL+  
Sbjct: 122 FNDKHLKQIGRSHNEAQIYSTIDSLKEAGFHNISIDLIYALPGQTLDQVKENVAKALALD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLSLY L +E  T+F    + G L LP+E++  +++    +   A+G   YEISN S 
Sbjct: 182 IPHLSLYSLILEHHTIFMNKMRRGKLNLPTEDLEAEMFTYIINEMEANGFEHYEISNFSK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HNL YW   +Y G G GA   +    +R  + I    + +L  V   G A +  
Sbjct: 242 PGFYSQHNLMYWNNDEYYGCGAGASGYLDGVRYRNRVPI----QHYLSAVEA-GDARLTN 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E L++ ++ +E L +GLR + G+S   ++   G + D    +    L ++G ++  Q  +
Sbjct: 297 EVLTANEKMEEELFLGLRKKTGVSKSRFQGKFGISFDSRYGQIVDKLVKRGLLQEDQ-DQ 355

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +R T++G+ + DSV     +
Sbjct: 356 VRMTKKGLFLGDSVAEEFIL 375


>gi|188995358|ref|YP_001929610.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas gingivalis ATCC 33277]
 gi|188595038|dbj|BAG34013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas gingivalis ATCC 33277]
          Length = 376

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 193/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S        +  +IQ+ + EM   R      +I +++FGGG
Sbjct: 3   GLYIHIPFCATRCSYCDFYSQT--NSALRSEYIQALIAEMSIRRAEVTD-TIGTLYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ PQ I  I++ + + ++ SS+ EIT+EANP  +  +  Q  R   +NRIS+G QS
Sbjct: 60  TPSLLSPQEIGRIIEQVYRLFSFSSDAEITLEANPDDLNTSYVQELRTLPINRISMGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L FL R HNA + + A+   RN     +S DLIY LP QT  +W+  +   L+ +
Sbjct: 120 FHDEDLHFLNRRHNARQVLEAVDTCRNAGLTNLSIDLIYGLPGQTPARWQENISAVLALS 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS Y L  E+GT   ++   G +    E V+++L+ + +   +  G   YEISN + 
Sbjct: 180 PSHLSAYHLIYEEGTPLTRLLHAGKVREVDEEVSLELFRMLREQLTGAGYEHYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G+GP AHS       R           ++  +   G  +  +
Sbjct: 240 SGYHSRHNSSYWQDTPYLGLGPSAHSF---DGRRTRRCNPSDIRRYIVSMAA-GKPLFTE 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSR 375
           E L+   + +E +M  LR   G+S      L G+     C R      R G +      R
Sbjct: 296 EILTDNDRYNEVVMTRLRTACGLSPDQIGHLFGKESAERCIRTAALFIRDGLLHEEADGR 355

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +R T++G+ + D +I+   +
Sbjct: 356 IRLTEKGIFLSDRIISEFFI 375


>gi|262282906|ref|ZP_06060673.1| coproporphyrinogen III oxidase [Streptococcus sp. 2_1_36FAA]
 gi|262261158|gb|EEY79857.1| coproporphyrinogen III oxidase [Streptococcus sp. 2_1_36FAA]
          Length = 376

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLQAV-EVGNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEKIEEEMFLGLRKKSGVSKKRFEEKFGLSFEDQYGAVVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|199597092|ref|ZP_03210524.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus HN001]
 gi|258508602|ref|YP_003171353.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus GG]
 gi|199591896|gb|EDY99970.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus HN001]
 gi|257148529|emb|CAR87502.1| Oxygen-independent coproporphyrinogen III oxidase [Lactobacillus
           rhamnosus GG]
 gi|259649909|dbj|BAI42071.1| coproporphyrinogen III oxidase [Lactobacillus rhamnosus GG]
          Length = 381

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 122/381 (32%), Positives = 187/381 (49%), Gaps = 12/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G Y+H PFC   C YCDFN  V       ++++   L EM+ +        I +++ GGG
Sbjct: 3   GAYIHIPFCEHICYYCDFNK-VFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIETVYVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQ 138
           TP+ + PQ +A++  GI          E T EANP+ +   +  Q     GVNR+S+GVQ
Sbjct: 62  TPTTLTPQQLAVLCQGIRDILHFDHG-EFTFEANPNDLLTTDKLQVLYDFGVNRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ +GR H A +   AI  AR   F  +S DLI+ LP Q+   +   LQ+AL+ 
Sbjct: 121 SFNDDVLKRIGRIHRAKDVYTAIGNARKVGFDNLSIDLIFRLPDQSRDDFLNSLQKALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN +
Sbjct: 181 DLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNL YW+   Y G G GA   +    +     I    + +L  +  +   V+ 
Sbjct: 241 KTGYQCRHNLLYWQNDKYFGFGAGAFGYLGRDRYHNYGPI----KQYLAPLHADHLPVLA 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              +   +Q +E + +GLR   G++   +       +D    E    L+ QG IER Q  
Sbjct: 297 HHLVPVSEQIEEEMFLGLRTMAGVNEDRFYSRYHMTVDAVYGETVPELESQGLIER-QNG 355

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T RG  + + V     +
Sbjct: 356 YIRLTNRGKFLGNEVFQQFLL 376


>gi|327460452|gb|EGF06789.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1057]
          Length = 376

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 200/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ ++    +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLSDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLHLPKEDLEAEMFEYIIAELGKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+ +++ +E + +GLR + G+S K +E   G + + +      +L  QG +   
Sbjct: 293 RVQEEVLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEGQYGAVVSDLTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|118463403|ref|YP_881013.1| coproporphyrinogen III oxidase [Mycobacterium avium 104]
 gi|254774606|ref|ZP_05216122.1| coproporphyrinogen III oxidase [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|118164690|gb|ABK65587.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mycobacterium avium 104]
          Length = 390

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 187/381 (49%), Gaps = 13/381 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
              G+YVH PFCV +C YCDFN++      G   + ++ +  TE++       P  ++++
Sbjct: 19  RPFGLYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLGALRTELELAAARLRPPPVNTV 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+    +AL+LD + +++ ++ + EIT EANP S     F   R AG  R+S
Sbjct: 79  FVGGGTPSLLGGARLALLLDMVREHFALAPDAEITTEANPESTWPEFFDAIRAAGYTRVS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS+  + L  L R H  +  A AA       F  +S DLIY  P ++       L  
Sbjct: 139 LGMQSVAPRVLGVLDRIHTPNRSADAAREALAAGFEHVSLDLIYGTPGESDEDLLWSLDT 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  GL  YE+
Sbjct: 199 AIETGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSQAGLSWYEV 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN S  G +  HNL YW  G + G GPGAH  V            KHP ++ + +     
Sbjct: 259 SNWSRPGGQCRHNLGYWDGGQWWGAGPGAHGYVGTTR----WWNVKHPNAYAERLNAAAL 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            V   E L SE    E +++ +RLR+G+ V           + E  + +   G + R   
Sbjct: 315 PVAGFEQLGSEALHTEDVLLKIRLRQGLPVDLLN-----PAERERVQGVVADGLLVR-DG 368

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG  + D V+  L 
Sbjct: 369 DRLVLTPRGRLLADGVVRTLL 389


>gi|254295451|ref|YP_003061474.1| oxygen-independent coproporphyrinogen III oxidase [Hirschia baltica
           ATCC 49814]
 gi|254043982|gb|ACT60777.1| oxygen-independent coproporphyrinogen III oxidase [Hirschia baltica
           ATCC 49814]
          Length = 383

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 156/386 (40%), Positives = 225/386 (58%), Gaps = 6/386 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +  +     G+Y+HWP+C K CPYCDFN +  + +   +  + +   +++  R+ TG R 
Sbjct: 2   LQFEPHRGFGIYIHWPYCAKICPYCDFNVYAAKDRN-IDPLLLAIREDLKGWREKTGSRH 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+ P+ I  +L  IA+ W +  + EIT+EANP  +    F G   AGV
Sbjct: 61  VDTVFLGGGTPSLLPPEAIRQLLADIAELWPLRDDAEITLEANPDDMN--RFAGIADAGV 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQSL++ +L FLGRNH+A  A+ AI   R  F  +S D IYALP Q+  +W+ E
Sbjct: 119 NRLSLGVQSLDDAALTFLGRNHSAKIALEAIGEGRRCFSSLSLDFIYALPNQSKEKWQAE 178

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   +    DHLSLY+LTIE+ T F K    GD    +E+VA DLY +TQ    A G  A
Sbjct: 179 LSDIIDLGADHLSLYELTIEQRTAFGKAVSRGDWTPANEDVAADLYEVTQLEMEAAGYSA 238

Query: 251 YEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YEISNH+  +  ++ HN+ YW+ GD++G+GPGAH RV +   R+    EK P+ ++  V 
Sbjct: 239 YEISNHAKSVQHQAKHNIVYWKSGDWLGVGPGAHGRVTLDGKRLETISEKRPDKYISKVE 298

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           K G    +   LS E  A E +MMGLR+ +GI   D+E ++GR  D     +    G IE
Sbjct: 299 KTGVG-ADYNPLSIEDIAAERVMMGLRMTQGILRSDFEKISGRCFDETAIASFISDGLIE 357

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
            +  S L+ T  G  + D +   L +
Sbjct: 358 -LDGSILKLTAEGCLLADYISQKLVL 382


>gi|332366651|gb|EGJ44394.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1059]
          Length = 376

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYNSYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSACQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQGKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWNNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+ ++Q +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEQMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + +R T++G+ + D+V     +
Sbjct: 352 DRNIVRMTKQGLFLGDTVAEKFIL 375


>gi|227495933|ref|ZP_03926244.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           urogenitalis DSM 15434]
 gi|226834521|gb|EEH66904.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           urogenitalis DSM 15434]
          Length = 426

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 116/394 (29%), Positives = 178/394 (45%), Gaps = 23/394 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQL-----TGPR 69
              VY+H P+C  +C YCDFN++            +++ +   E++             R
Sbjct: 36  PFSVYLHVPYCRVRCGYCDFNTYTNLEMGGGASAADYVTTLAGELRLAAAAMERAGLPRR 95

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              ++F GGGTP+++   ++A +L+ +   W ++   E+T EANP +V+        +AG
Sbjct: 96  MAQTVFLGGGTPTMLPAADLAAMLELVRTTWGLAEGAEVTTEANPETVDERYLATLAEAG 155

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S G+QS   Q L  L R+H        +  AR      S DLIY  P +++  W  
Sbjct: 156 FTRVSFGMQSAVPQVLATLERSHTPQRVPQVVAWARRSGLETSLDLIYGTPGESVQDWAR 215

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ A+    DHLS Y L IE+GT  +   + G+L +P+++     Y +  ++ +  G  
Sbjct: 216 SLEAAVEIGPDHLSAYALVIEEGTRMWTQVRRGELEMPADDDEATKYEMADAVLAEAGYE 275

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G E  HN  YWR  D+ G GPGAHS        V +   K P +W   VR
Sbjct: 276 WYEISNWARPGHECRHNEAYWRDWDWYGAGPGAHSHFGD----VRMWDTKAPVAWAAQVR 331

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--------CERN 361
                V   E +    +  E +M+G+RLREG+ +       G     +            
Sbjct: 332 AGRLPVAGHEVIDDGARELERVMLGIRLREGLDLAGL-ARPGEETTADGTPRRLVPVVGA 390

Query: 362 LQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
           L  QG +E       R   T RG  M D+V   L
Sbjct: 391 LMSQGLLEPAAALRGRAVLTLRGRLMADTVTGRL 424


>gi|269926469|ref|YP_003323092.1| oxygen-independent coproporphyrinogen III oxidase [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269790129|gb|ACZ42270.1| oxygen-independent coproporphyrinogen III oxidase [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 389

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 121/383 (31%), Positives = 193/383 (50%), Gaps = 12/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ +G+YVH PFC  KC YCDFN +  +      +++ +   E+             +++
Sbjct: 13  SSYVGLYVHIPFCKTKCIYCDFNCYAGKN-ALIPDYVLALGKELVTYSD--QGLVARTLY 69

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ P  +  I+        +    EIT+EANP +V    F+     GVNRIS+
Sbjct: 70  MGGGTPSLLSPSQVLYIVGTARDYLRLVDGAEITMEANPGTVSEQYFRDILAMGVNRISI 129

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS ++  LR L R+H   EA+ A   AR   F  +S DLIY LP QT+  W   L R 
Sbjct: 130 GIQSFKDDDLRRLARHHTVEEALEAYRAARAAGFENISVDLIYGLPFQTLDDWRHNLSRV 189

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    DH+SLY LT+E+GT  +++   G L  P +++  D+Y L Q +    G   YEIS
Sbjct: 190 VDIEPDHISLYALTVEEGTPLHRLISRGKLPSPDDDLMADMYELAQEVLEKAGYIHYEIS 249

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G +S HN+ YWR   +IG G GA+  +    +      E  P  ++ ++      
Sbjct: 250 NWCRPGKQSKHNMIYWREEPFIGAGAGAYGFLNSVRYYN----ELLPSKYISLINNGQSP 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERV 371
           +V +E LS   +  E++++ LRL EG++ ++++   G++L         ++   G +E  
Sbjct: 306 IVWQEELSVPIERSEYVILHLRLAEGVNAEEFQSRYGQSLHSFLSGKIDDVAGLGLVEWK 365

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
                R T +G  + + V   + 
Sbjct: 366 DN-YFRLTPKGRLLSNEVFVRIL 387


>gi|229493209|ref|ZP_04387001.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodococcus erythropolis SK121]
 gi|229319940|gb|EEN85769.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodococcus erythropolis SK121]
          Length = 408

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 115/397 (28%), Positives = 180/397 (45%), Gaps = 20/397 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQ 64
             ++ G G    G+Y+H PFC  +C YCDFN++           +++++    E+    +
Sbjct: 21  ARSLEGVGKRPFGIYIHVPFCATRCGYCDFNTYTAGELGTSASPQSWLEGLRRELDLAAE 80

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +TG  +  ++F GGGTPSL+    +  +L  +  ++ ++   E+T E+NP S     F  
Sbjct: 81  MTGAPAAETVFVGGGTPSLLGGDGLTDVLSAVRSSFGLAPGAEVTTESNPESTSPEFFGA 140

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQT 183
            R AG  RISLG+QS  +  L+ L R H       AA       F  ++ DLIY  P + 
Sbjct: 141 LRSAGFTRISLGMQSAAQHVLKILDRTHTPGRAVAAAKEARAAGFSHVNLDLIYGTPGER 200

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               +  L   LS  VDH+S Y L +E GT   +  + G+L  P ++V    Y    S  
Sbjct: 201 DQDLDASLDAVLSADVDHVSAYALIVEDGTAMARKVRRGELPAPDDDVLASRYERIDSRL 260

Query: 244 SAHGLHAYEISNHSFL------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
           S  GL  YE+SN +             HN+ YW  GD+ G GPGAHS V      V    
Sbjct: 261 SEAGLGWYEVSNWAKAETADSGDTRCRHNIGYWDGGDWWGAGPGAHSHVGG----VRWWN 316

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            KHP  + + +      V   E L++E +  E +M+  RLR G+ + +       + +  
Sbjct: 317 VKHPARYAEQLALGELPVGGSEELTAEDEHMERVMLTARLRTGLPLSELSASERLSAEQV 376

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               L        ++   +  T RG  + D+VI  + 
Sbjct: 377 VVDGLA------VIENDHVVLTDRGRLLADAVIRTIL 407


>gi|220932120|ref|YP_002509028.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Halothermothrix orenii H 168]
 gi|219993430|gb|ACL70033.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Halothermothrix orenii H 168]
          Length = 385

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 207/382 (54%), Gaps = 9/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+H+PFC++KC YCDF S ++  +     +++S L E++   +    + I +I+
Sbjct: 8   DRPFGLYIHFPFCLRKCSYCDFYS-IKYTQEFANKYVESLLKEIKIYSKKIPTKKIKTIY 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP L     +  I D I  N++VS   EIT+EANP S+ +   + ++K G+NR+SL
Sbjct: 67  LGGGTPGLFTYNQLYRIFDFIFNNFSVSEEGEITLEANPGSLTLEKIKYFKKLGINRLSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS  E  L+ LGR H++ +A   + L   +F   + DLI+A+P Q+M  WE  L++ L
Sbjct: 127 GVQSFVEDELKLLGRFHSSKKAREVLLLINRVFDNYNTDLIFAIPGQSMDNWEYSLKQIL 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLSLY L +EKGTL YK  K G++   S+ V   +Y   +      G   YEISN
Sbjct: 187 ELKPPHLSLYNLQLEKGTLLYKKVKKGEIKPVSDEVDARMYLKAKKQLGKAGYLHYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN+ YW+Y  Y+G+GP AHS     + +   +   +   ++K +      V
Sbjct: 247 FARPGFESRHNILYWKYEPYLGLGPAAHSF----TGKTRFNNYSNLTPYIKHLENGVLPV 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQ 372
                L  E+   E++++GLRLR+GIS K+++   G +L          L  +  I  ++
Sbjct: 303 DNTVRLDREEMMSEYIILGLRLRKGISFKEFKECFGVDLKEIYYNKITELIEKDLIH-IK 361

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R++ T++G+ + + V     
Sbjct: 362 GDRIQLTEKGLLLGNQVFVEFL 383


>gi|212716005|ref|ZP_03324133.1| hypothetical protein BIFCAT_00917 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661372|gb|EEB21947.1| hypothetical protein BIFCAT_00917 [Bifidobacterium catenulatum DSM
           16992]
          Length = 401

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 120/398 (30%), Positives = 194/398 (48%), Gaps = 29/398 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM  +R             +
Sbjct: 4   VYIHVPFCMRRCGYCDFNTYTAVDMGEGASRGNYANMVIREMSIVRDWQIAHGIDEPEAA 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++++  ++  +L+ +   W ++ N EIT EANP +V  +  +     G NR
Sbjct: 64  TVFFGGGTPTILKASDLVAMLNAVRDTWGIAENAEITTEANPDTVNADYVKELANGGFNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H  +   A I +A  +  R S DLIY  P +++  W   ++
Sbjct: 124 ISFGMQSAVPSVLKILDRTHTPANVAAGIAVANAVGMRSSVDLIYGAPGESLDDWRASVR 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+   T   +    G L  P ++     Y +   + SA GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVAPNTKMGRQIAAGTLPTPDDDDEATKYEIADDLLSAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK----------------VGSHRVAIS 296
           ISN +  G ES HNL YWR  D+ G+GPGAHS                   V +  +   
Sbjct: 244 ISNWARPGYESQHNLGYWRNIDWAGLGPGAHSHYGNVLDVEQSTPKEKTETVKTSGLRSW 303

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
              HP  W + +          E +S+E+  +E +M+GLR+REG+ +       G  +D+
Sbjct: 304 DIAHPRMWGQAINAGDMPWSGSERISNEENLEEIIMLGLRIREGLDLSLL----GNTVDM 359

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              + ++ +G I  ++  R+  T+ G  + D+VI    
Sbjct: 360 ARIQPMEDEGLIV-IRDGRVIPTRTGRLLNDTVIERFF 396


>gi|157150147|ref|YP_001450610.1| coproporphyrinogen III oxidase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074941|gb|ABV09624.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 376

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYHSYDIQKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+ 
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLQAVEA-GNT 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+ +++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEVLTLKEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTDQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + +R T++G+ + D+V     +
Sbjct: 352 DRNIVRMTKQGLFLGDTVAEKFIL 375


>gi|239500871|ref|ZP_04660181.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii AB900]
 gi|322506615|gb|ADX02069.1| coproporphyrinogen III oxidase [Acinetobacter baumannii 1656-2]
          Length = 384

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 133/394 (33%), Positives = 210/394 (53%), Gaps = 18/394 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQ 64
             +    S  L +Y+H P+CV+KCPYCDFNSH              ++++ + + +   +
Sbjct: 1   MAVLNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVE 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +  A + + +        + EIT+EANP ++E + F G
Sbjct: 61  MAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAG 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 121 YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+     H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 181 LEQALYDLKTAVEQGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 236

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ 
Sbjct: 237 KANGFINYEVSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 295

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +L  V      + + E   +++   EF+M  LRL +G+  + +E   G +LD   +    
Sbjct: 296 YLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTS 352

Query: 364 ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              R+  +E     RL CT++G   L+SV+    
Sbjct: 353 LRSRELLVE--DSDRLACTEQGHIFLNSVLEEFL 384


>gi|165976267|ref|YP_001651860.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876368|gb|ABY69416.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 385

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 131/390 (33%), Positives = 205/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTMDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYITETEN-HWQITQHGKLFLNELLEGFL 384


>gi|226942462|ref|YP_002797535.1| coproporphyrinogen III oxidase [Azotobacter vinelandii DJ]
 gi|226717389|gb|ACO76560.1| oxygen-independent coproporphyrinogen III oxidase [Azotobacter
           vinelandii DJ]
          Length = 373

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 208/380 (54%), Gaps = 12/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +YVH P+CV+KCPYCDFNSH    ++ +E ++ + L ++         R + SIFFGG
Sbjct: 1   MALYVHIPWCVRKCPYCDFNSHAAGAELPEEVYVDTLLADLAADLPAAHGRELVSIFFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   +    +LDGI ++ + + ++EIT+EANP + E   F  YR+ G+NR+S+GVQ
Sbjct: 61  GTPSLFSARAFERLLDGIGRHLSFARDIEITLEANPGTFEQEKFADYRRLGINRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H+A EAI A  +AR   F   + DL++ LP Q +     +L++A++ 
Sbjct: 121 SFQNAQLQALGRIHDAGEAIRAAGMARRAGFDNFNLDLMHGLPGQDLAGALADLRQAIAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS YQLT+E  TLF+         +P +++  D+    Q++ +A G   YE S ++
Sbjct: 181 EPTHLSWYQLTLEPNTLFWSQPP----EIPEDDLLWDIQEAGQTLLAAEGFVQYETSAYA 236

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
             G  + HNLNYW +GD++GIG GAH+++     R+  + + + P  +L   R+      
Sbjct: 237 RNGRRARHNLNYWTFGDFLGIGAGAHAKLSDPHGRIRRTWKTRQPRDYLAPERRFQ---A 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFS 374
            +  L +++   EF+M  LRL EG+    +    G  L          +  G +E     
Sbjct: 294 GERLLEADELPFEFMMNALRLTEGVPAGLFGERTGLPLAGIAAPCAAARAAGLLEN-DPQ 352

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T RG   L+ ++    
Sbjct: 353 RLRPTARGQLFLNDLLQYFL 372


>gi|253682679|ref|ZP_04863476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum D str. 1873]
 gi|253562391|gb|EES91843.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum D str. 1873]
          Length = 375

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 202/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N + +Y+H PFC +KC YCDF S+  + +    ++ ++  TE+  ++     + + +IF
Sbjct: 2   NNDISLYIHIPFCKQKCLYCDFTSYCGK-ESQMLSYSKALSTEIDNIK----DKKVKTIF 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  +   ++   I K    S ++E T+E+NP + +    +  +  GVNRIS+
Sbjct: 57  IGGGTPTYLSLEGWNILKKSIDKLQK-SEDLEFTVESNPKTFDKEKLEILKSMGVNRISI 115

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ + + L+ LGR H   E + + ++AR   F  ++ DL++ +P Q+  +W+  L   
Sbjct: 116 GLQAWQNKHLKALGRIHTREEFLKSYNMAREVGFENINVDLMFGIPNQSFDEWKETLNEI 175

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    +HLS Y L IE+ T FY ++++  + LPSE +   +Y  T       G H YEIS
Sbjct: 176 IKLNPEHLSCYSLIIEEDTPFYNLYENQKINLPSEELERKMYWYTLKFLKEKGYHQYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S    E  HNL YW   +YIG G  AHS  +   +  +  I    E ++K++  N   
Sbjct: 236 NFSKENKECRHNLVYWNLNEYIGCGVAAHSYSQGYRYNNSGKI----EEYIKLIENNQSP 291

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERV 371
           +VEK   S +   +EF+ MGLR  +GIS++++     ++   L  +     +  G I   
Sbjct: 292 IVEKVRNSLKSDIEEFIFMGLRKIKGISIEEFHKRFKKSIYELYSDVIAKHKSNGLIIEY 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               L  + +G+ + + ++++  +
Sbjct: 352 -NGYLFLSDKGVEVSNYIMSDFLL 374


>gi|269468050|gb|EEZ79768.1| coproporphyrinogen III oxidase [uncultured SUP05 cluster bacterium]
          Length = 368

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 125/378 (33%), Positives = 200/378 (52%), Gaps = 22/378 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CVKKCPYCDFNSH       +  +I++ L ++    +    RSI SIF G
Sbjct: 6   PLSLYIHYPWCVKKCPYCDFNSH---EGEDRNGYIEALLKDLDKDLKYVQGRSIHSIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +  G+    T   N+EIT+E NP + EV+ F+ ++  G+NR+S+GV
Sbjct: 63  GGTPSLMSADELHELFTGLKSKLTFEKNIEITLETNPGTFEVDKFKAFKDIGINRLSIGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ L  LGR H+A +A  A   A  IF   + DL+Y L  Q++     +L +A+  
Sbjct: 123 QSFQDRHLNALGRIHSAEDASKACTYASQIFNNFNIDLMYGLEGQSIDDCLSDLNQAIDL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  H+S YQLTIE  TLF K        LP ++    +      +    G   YE+S   
Sbjct: 183 SPQHVSFYQLTIEPNTLFAKFPP----TLPKDDDIWRMGEQGVDLLEQCGFERYEVSAFG 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHAV 315
            +   S HNLNYWR+GDYIGIG GAH ++        V     K P+ +++   K    +
Sbjct: 239 KI--PSKHNLNYWRFGDYIGIGAGAHGKITESKTGKVVRTLKSKSPKEYIQNRNKTLEVI 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
                   +  + EF++  LRL+ G  V  ++   G+++++  E  +  +  G +   + 
Sbjct: 297 --------DNLSFEFMLNALRLKNGFDVDLFKARTGKDINVINEQLKRAESMGLVNLTK- 347

Query: 374 SRLRCTQRGMTMLDSVIA 391
            R+  T++G   L+ +I+
Sbjct: 348 DRITPTKKGFDFLNDLIS 365


>gi|225567879|ref|ZP_03776904.1| hypothetical protein CLOHYLEM_03952 [Clostridium hylemonae DSM
           15053]
 gi|225163357|gb|EEG75976.1| hypothetical protein CLOHYLEM_03952 [Clostridium hylemonae DSM
           15053]
          Length = 367

 Score =  341 bits (876), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 202/385 (52%), Gaps = 29/385 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFC+KKC YCDF S     +  QE ++     +++   +L     + ++F 
Sbjct: 2   RPLELYIHIPFCIKKCRYCDFQSAPSTKEERQE-YVTGLCRKIRSYGELAEAYHVVTVFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E   I  I+D +   + + +  EIT+EANP +V    F+  R AG+NR+S+G
Sbjct: 61  GGGTPSVLEGAQILDIMDAVRGTFPIDAGAEITMEANPGTVTKEKFKTLRHAGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ LGR H   + +     AR   F  ++ DL+ A+P Q++  W+  L R  
Sbjct: 121 LQSTDNSELKMLGRIHTYEDFLQTFDAARETGFDNINVDLMSAIPFQSVDSWDTTLIRTA 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL--VLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               +H+S Y L IE+GT F++ + +G     LPSE     +Y  T+ I S +G H YEI
Sbjct: 181 GLGPEHISAYSLIIEEGTPFFERYGNGKRAGELPSEEEERLMYMHTRDILSEYGYHRYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G E  HNL YW   +Y+GIG GA S ++                      +   
Sbjct: 241 SNYARPGYECRHNLGYWNRAEYLGIGTGAASLMQEYRF-----------------TEGEE 283

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIER 370
            V     LS ++Q +EF+ +GLR  EGIS K ++   GR ++    +    + R+G +E 
Sbjct: 284 PVK----LSVQEQMEEFMFLGLRKTEGISKKAFQKCFGRAVESVYGKVIIEMCRKGLLE- 338

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   +R T++G  + + V++   +
Sbjct: 339 MEGDAVRLTEKGTDVSNYVMSEFLL 363


>gi|326773566|ref|ZP_08232849.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           viscosus C505]
 gi|326636796|gb|EGE37699.1| oxygen-independent coproporphyrinogen III oxidase [Actinomyces
           viscosus C505]
          Length = 415

 Score =  341 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 116/417 (27%), Positives = 185/417 (44%), Gaps = 28/417 (6%)

Query: 1   MKYLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFL 56
           M  L A        GS     VY+H P+C  +C YCDFN++           E+F+ +  
Sbjct: 1   MGELPAQAAASAPDGSERPFSVYLHVPYCRVRCGYCDFNTYTNLTMGQGASAEDFVGTLA 60

Query: 57  TEMQWMRQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
            E++  R+         R+  ++F GGGTP+++   ++  +L+ + + + ++++ E+T E
Sbjct: 61  GELRAARRAMDSAGLPVRAAQTVFVGGGTPTMLPATDLVSMLELVRECFGLAADAEVTTE 120

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           ANP SV+    +   + G  R+S G+QS     L+ L R H        +  AR      
Sbjct: 121 ANPDSVDEAGLEALAEGGFTRVSFGMQSAVPHVLKVLERTHEPVRVPRVVEWARRAGLST 180

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DLIY  P +++  W+  L        DH+S Y L IE+GT  +   + G+L +P ++ 
Sbjct: 181 SLDLIYGAPGESLEDWQRSLDAVTRIGPDHVSAYALVIEEGTRMWGQVRRGELPMPEDDD 240

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
               Y +  +     G   YEISN +  G+E  HN  YW   D+ G GPGAHS +     
Sbjct: 241 EATKYEMADAALGQAGYECYEISNWARPGSECRHNQAYWLDWDWWGAGPGAHSHLGD--- 297

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            V +   KHP +W   +      V   E + +E +  E +M+G+RLREG+ +        
Sbjct: 298 -VRLWNTKHPVAWAGQIATGHLPVAGHEVIDAESRELERIMLGIRLREGVELASLGNRPD 356

Query: 352 RNLDIECER-------------NLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANL 393
                  +R              L   G ++       R   T RG  M D+V   L
Sbjct: 357 CPSADRPDRGRATPPHLVPIVAGLVGDGLLDAGAALRGRAVLTLRGRLMADTVTRAL 413


>gi|242277644|ref|YP_002989773.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           salexigens DSM 2638]
 gi|242120538|gb|ACS78234.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           salexigens DSM 2638]
          Length = 398

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 134/387 (34%), Positives = 219/387 (56%), Gaps = 12/387 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G  + +L VY+H PFC +KC YC F+S     +VG   ++++ L+E++   +      I 
Sbjct: 17  GSEARNLLVYIHVPFCKRKCNYCAFHSQPF-EQVGFAWYMKTLLSEIELWGKRLKNPRIG 75

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVN 131
           +++FGGGTPSLI P  + LI+D + K+++ +  +EIT+EANP S  +++ F+     G+N
Sbjct: 76  TVYFGGGTPSLIPPFQLELIMDALRKHFSFTKGMEITLEANPDSANDLSYFKALYDMGIN 135

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLG QSL++++L  LGR H+A +A  A ++AR   F  +S DLI+ LP+Q +  W  E
Sbjct: 136 RLSLGFQSLDDRNLEMLGRPHSARQAADAYYMARKAGFGNISIDLIWGLPRQKVKDWNNE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  +    +H+S Y L+IE GT+F +  +D D+ LP +     ++        A G   
Sbjct: 196 LKAVVQLKPEHMSCYGLSIEPGTVFGQRAEDLDMELPPDGEQARMFIYGAEYLEAMGYIQ 255

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN + +G  S HN  YW   DY+G+GP A S +         +  ++ + +   VR 
Sbjct: 256 YEISNFARMGFISRHNQGYWDRLDYLGLGPSAVSTIGN----RRFTNPRYLDEYDAAVR- 310

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGF 367
            G    + E L+ E +A E +M+ LR  +G+ + D+  L GR+L  E       L + G 
Sbjct: 311 GGFLGEDFEELTDEIKAQELIMLCLRTTKGLKLSDYTELTGRDLTKEKTSIISALHKNGL 370

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           + R+    LR T+ GM + +S++ +LA
Sbjct: 371 V-RMSAGYLRLTKNGMLVSNSILESLA 396


>gi|332701625|ref|ZP_08421713.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551774|gb|EGJ48818.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 464

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 131/391 (33%), Positives = 190/391 (48%), Gaps = 12/391 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + T     +L +YVH PFC  KC YC F+S           E + ++   EM+   Q  G
Sbjct: 49  DTTNPKQPALLLYVHVPFCRSKCRYCAFHSVPLTMDSMEDMERYAEAVAREMKLWGQRLG 108

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                +++FGGGTPS++    +  I+  +  ++ +S   E T EANP SV +N  +  R 
Sbjct: 109 KPPAHTVYFGGGTPSVLPEYALERIMRALRDSFDLSGCQEFTFEANPDSVHLNYLRELRD 168

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNR+SLGVQSL    L FLGR HNA +A+ A H AR   F  +S D I+ LP+Q    
Sbjct: 169 FGVNRLSLGVQSLNNDELTFLGRPHNALQAVQAFHTARAAGFGNVSLDFIWGLPRQNAAS 228

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L++A     +HLS Y LTIE  T      + G L+LP E++    Y         H
Sbjct: 229 WIKTLKKAEELRPEHLSCYGLTIEPNTPLEAEEQAGTLILPGEDMLAKCYIYGAQFLEEH 288

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEIS+ + +G  S HN+ YW   DY+G GP A S    G  R     + H   ++ 
Sbjct: 289 GYLQYEISSFARMGYASKHNMGYWAGSDYLGFGPAAVS--TFGGRRWTNPTDMH--DYVF 344

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQ 363
            V   G      E L    +  E +M+ LR  +G+ +++ +   G +      +    L+
Sbjct: 345 QVDAGGTG-KRAEELDEATRLRERIMLALRTTQGLDLREHDKRTGGSFLERHRKLVTLLR 403

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             G I R+    L  T+ GM + D++I  LA
Sbjct: 404 NNGLI-RLSKGSLSLTRTGMLVSDTIIEKLA 433


>gi|190150173|ref|YP_001968698.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|307245710|ref|ZP_07527796.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307261332|ref|ZP_07543007.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307263512|ref|ZP_07545127.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|189915304|gb|ACE61556.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306853412|gb|EFM85631.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306869063|gb|EFN00865.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871155|gb|EFN02884.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 385

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 131/390 (33%), Positives = 205/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTVDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYITETEK-HWQITQHGKLFLNELLEGFL 384


>gi|269468265|gb|EEZ79949.1| coproporphyrinogen III oxidase [uncultured SUP05 cluster bacterium]
          Length = 397

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 201/377 (53%), Gaps = 22/377 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CVKKCPYCDFNSH       +  +I++ L ++    +    RSI SIF G
Sbjct: 28  PLSLYIHYPWCVKKCPYCDFNSH---EGEDRNGYIEALLKDLDKDLKYVQGRSIHSIFIG 84

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +  G+    T   N+EIT+E NP + EV+ F+ ++  G+NR+S+GV
Sbjct: 85  GGTPSLMSADELHELFTGLKSKLTFEKNIEITLETNPGTFEVDKFKAFKDIGINRLSIGV 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ L  LGR H+A +A  A   A  IF   + DL+Y L  Q++     +L +A+  
Sbjct: 145 QSFQDRHLNALGRIHSAEDASKACTYASQIFNNFNIDLMYGLEGQSIDDCLSDLNQAIDL 204

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +  H+S YQLTIE  TLF K        LP ++    +     ++   HG   YE+S   
Sbjct: 205 SPQHVSFYQLTIEPNTLFAKFPP----TLPKDDDIWRMGEQGVALLEQHGFERYEVSAFG 260

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHAV 315
            +   S HNLNYWR+GDYIGIG GAH ++        V     K P+ +++   K    +
Sbjct: 261 KI--PSKHNLNYWRFGDYIGIGAGAHGKITESKTGKVVRTLKSKSPKEYIQNRNKTLEVI 318

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQF 373
                   +  + EF++  LRL+ G  V  ++   G+++++  E  +  +  G +   + 
Sbjct: 319 --------DNLSFEFMLNALRLKNGFDVDLFKARTGKDINVINEQLKRAESMGLVNLTK- 369

Query: 374 SRLRCTQRGMTMLDSVI 390
            R+  T++G   L+ +I
Sbjct: 370 DRITPTKKGFDFLNDLI 386


>gi|307823237|ref|ZP_07653467.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
 gi|307736012|gb|EFO06859.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
          Length = 379

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 134/384 (34%), Positives = 207/384 (53%), Gaps = 15/384 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFF 76
            L +Y+H P+C+KKCPYCDFNSH  + ++ +  +I + L ++    +     R ISSIF 
Sbjct: 3   PLSLYIHIPWCIKKCPYCDFNSHAAKSELPESAYIAALLDDLALDIERYNITRPISSIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P+ I  +L GI +   +   +EIT+EANP + E + F  +R  G+NR+S+G
Sbjct: 63  GGGTPSLFSPEAINRLLRGIEQQLRLEEGLEITLEANPGTFESHKFAEFRALGINRLSIG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  +  L+ LGR H+A EAI A  +AR   F   + DL++ LP  T    ++++Q A+
Sbjct: 123 IQSFNDPLLKKLGRVHSAQEAIHAADIARQSGFDNFNLDLMFGLPGATPESSKIDIQTAV 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S    H+S YQLT+E  T F+K        LP +          Q + + HG   YE+S 
Sbjct: 183 SLKPTHISFYQLTLEPNTWFHKFPP----KLPDDETIFRTQKECQQLLAEHGYQQYEVSA 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGH 313
           +S  G +  HN+NYW++GDY+GIG GAH ++        V     K PE +L    KNG 
Sbjct: 239 YSKQGLQCRHNVNYWQFGDYLGIGAGAHGKITQSLPQSIVRSFKPKSPEQYLSNSHKNGG 298

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
           A    + ++      EF+M  LRL+ G  ++D++   G           +  +Q  + R 
Sbjct: 299 A----DVIAVADLPLEFIMNHLRLKRGFMLEDYQAATGLAATTLEPALSDCVKQNLLIR- 353

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           Q +   C+++G   LD+++    V
Sbjct: 354 QNNHYYCSEQGWNFLDNILEKFIV 377


>gi|71278082|ref|YP_270336.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Colwellia psychrerythraea 34H]
 gi|71143822|gb|AAZ24295.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Colwellia psychrerythraea 34H]
          Length = 388

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/387 (32%), Positives = 210/387 (54%), Gaps = 17/387 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIF 75
            L +Y+H P+CV+KCPYCDFNSH  +  + +++++ + + ++       G   RS+ SIF
Sbjct: 9   PLSLYIHIPWCVEKCPYCDFNSHAVKSAIPEQDYVAALIRDLDADIARFGLSTRSLHSIF 68

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL    +I  +L+ +   +   +++EIT+EANP +VE + F G+ KAGVNR+S+
Sbjct: 69  IGGGTPSLFSAASIKDLLEQVLNRFDHKADIEITLEANPGTVEADKFIGFFKAGVNRLSI 128

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS     L  LGR H++++A  A  LA        + DL++ LP Q++     +L+ A
Sbjct: 129 GVQSFASDKLIKLGRIHDSNQAKIAAKLATESGVSSFNLDLMHGLPNQSLDNALDDLKTA 188

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   +H+S YQLTIE  T+F+         LP +++  ++ +    + +  G   YEIS
Sbjct: 189 ISLNPNHISWYQLTIEPNTIFHSKPPK----LPVDDILWEIQDQGVKLLNEAGYQQYEIS 244

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VAISIEKHPESWLKMVRKNG 312
            ++ LG +  HNLNYW+YGDY+GIG GAH ++     +  +     KHP+ +L     N 
Sbjct: 245 AYAKLGYQCQHNLNYWQYGDYLGIGCGAHGKITDSRSQKIMRTIKVKHPKGYLD---DNR 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFI-- 368
             + +   +   ++  EF+M  LRL    S++ ++   G N+ +     +  Q++  +  
Sbjct: 302 DFLDKLSEVDESERPFEFMMNQLRLHSAFSIEQFQTSTGLNIKVVLPLLKEAQQKNLMTC 361

Query: 369 ERVQF-SRLRCTQRGMTMLDSVIANLA 394
           E +        TQ G   L+ ++    
Sbjct: 362 EVIDNEEYWLVTQLGQRYLNDLLEIFL 388


>gi|324991246|gb|EGC23180.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK353]
          Length = 376

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 197/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +   +++++  + E          + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLIEEYDSY----DIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I   +   F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYENIANLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELGKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGIRYKNHGPI----RHYLQTVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEALTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGISFEEQYGAIVAELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
             + +R T++G+ + D+V     +
Sbjct: 352 DRNIVRMTKQGLFLGDTVAEKFIL 375


>gi|299147866|ref|ZP_07040929.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 3_1_23]
 gi|298514049|gb|EFI37935.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides sp. 3_1_23]
          Length = 376

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 120/379 (31%), Positives = 197/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++++   E+   +       I +++FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTRYVRALCRELAMRKDYLKGEDIETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I  ++ +S   EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIRTHYGLSHCQEITLEANPDDLTSEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI A+H  R   F  +S DLIY LP +   +WE +L++A+S  
Sbjct: 121 FDDPTLKLLKRRHNAHTAIEAVHRCREAGFQNISIDLIYGLPGENKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ ++D + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + +N  A  E 
Sbjct: 241 PGKYSRHNSSYWKGIPYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEENSRA-FEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C+R      + G +E    + 
Sbjct: 296 EYLDQTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQRMAAPYLKNGKLEEHDGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|293374233|ref|ZP_06620561.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Turicibacter sanguinis PC909]
 gi|292647066|gb|EFF65048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Turicibacter sanguinis PC909]
          Length = 378

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 114/382 (29%), Positives = 203/382 (53%), Gaps = 11/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             G+Y+H PFC   C YCDF   + + +     +I++ + E++  +Q  G  ++ SI+ G
Sbjct: 2   PKGLYIHIPFCDHICTYCDFPKLLTKGQ-RHAEYIEALIQELKLYQQNVGFSNLQSIYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + I  + D + +   ++   E +IEANP ++  +  Q  +  GVNR SLGV
Sbjct: 61  GGTPTALSVEQIQPLFDFLTEQIQMNQIQEFSIEANPENLTRDKIQYLKAQGVNRFSLGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E  L+ +GR H A E I A+ +L +     ++ DLIYA+P QT+ +   +L++ +S
Sbjct: 121 QTFHESLLKRIGRKHQAQEVIQAVANLKQCGIKNINLDLIYAIPGQTLDELRDDLRQVIS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y L +E+ T  Y  +    + L    +   +Y +T    +  G   YEISN 
Sbjct: 181 LEVEHISAYSLIVEEHTQLYLAYMRDQIELTDNEIEAKMYEVTIETLTEAGYEHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     SLHN  YW+   YIG+G GAH  VK   ++   SI     +++++++     ++
Sbjct: 241 AKS-KPSLHNQWYWKNETYIGVGLGAHGYVKGQRYQNTRSIN----TYIELLKDGKLPMI 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQF 373
           E   L+ E+  +E + +GLRL +G+++K        N+D    +    L ++G++E+ + 
Sbjct: 296 ESHALTKEEMIEEEMFLGLRLLKGVNLKAISDKYDVNIDEIYGKAFEELIQKGYLEQKEL 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           + +R T  G+ M + V     +
Sbjct: 356 N-VRLTPSGLLMANEVFEQFLL 376


>gi|116495050|ref|YP_806784.1| coproporphyrinogen III oxidase [Lactobacillus casei ATCC 334]
 gi|191638553|ref|YP_001987719.1| coproporphyrinogen III oxidase [Lactobacillus casei BL23]
 gi|227534939|ref|ZP_03964988.1| coproporphyrinogen dehydrogenase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|301066613|ref|YP_003788636.1| coproporphyrinogen III oxidase-like Fe-S oxidoreductase
           [Lactobacillus casei str. Zhang]
 gi|116105200|gb|ABJ70342.1| coproporphyrinogen III oxidase, anaerobic [Lactobacillus casei ATCC
           334]
 gi|190712855|emb|CAQ66861.1| HemN protein [Lactobacillus casei BL23]
 gi|227187396|gb|EEI67463.1| coproporphyrinogen dehydrogenase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|300439020|gb|ADK18786.1| Coproporphyrinogen III oxidase related Fe-S oxidoreductase
           [Lactobacillus casei str. Zhang]
          Length = 381

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 184/381 (48%), Gaps = 12/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G Y+H PFC   C YCDFN  V       ++++   L EM+ +        I +++ GGG
Sbjct: 3   GAYLHIPFCEHICYYCDFNK-VFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIQTVYVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQ 138
           TPS + P  +A +  GI          E T EANP+ +      Q     GVNR+S+GVQ
Sbjct: 62  TPSTLTPTQLATLCQGIHDILHFDQG-EFTFEANPNDLLTTEKLQVLHDYGVNRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  LR +GR H A +   AI  AR   F  +S DLI+ LP Q+   +   LQ+AL+ 
Sbjct: 121 SFNDDVLRRIGRIHRAKDVYTAIANARQVGFDNISIDLIFRLPDQSRDDFLTSLQKALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN +
Sbjct: 181 DLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNL YWR   Y G G GA   +    +     I    + +L  +  +   V+E
Sbjct: 241 KDGYQCEHNLLYWRNDKYFGFGAGAFGYLGRDRYHNYGPI----KQYLTPLHADHLPVLE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              +   +Q +E + +GLR  +G+S   +       +D    E    L  QG + R Q  
Sbjct: 297 HHLVPQSEQIEEEMFLGLRTMQGVSEARFYDRYHMTVDAIYGETVPELVSQGLVVR-QDG 355

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T +G  + + V     +
Sbjct: 356 YIRLTNKGKFLGNEVFQRFLI 376


>gi|210609778|ref|ZP_03288110.1| hypothetical protein CLONEX_00294 [Clostridium nexile DSM 1787]
 gi|210152780|gb|EEA83786.1| hypothetical protein CLONEX_00294 [Clostridium nexile DSM 1787]
          Length = 383

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 209/386 (54%), Gaps = 13/386 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            N L +Y+H PFCV+KC YCDF S     +   EN++++ + E++  + L+    + +IF
Sbjct: 2   KNELELYLHIPFCVRKCAYCDFLSSPENGET-IENYVEALIREIKAYQALSLNDIVVNIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++E   +  I + + + + ++ + EIT+EANP +V       YRK G+NRIS 
Sbjct: 61  LGGGTPSVLEGNQMERIFEALHEVFEIAEDAEITVEANPGTVTQEKLSAYRKLGINRISF 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +   L+ LGR H   + + +  +AR   F  ++ DLI A+PKQT+  WE  L+R 
Sbjct: 121 GLQSADNGELKLLGRIHTYEQFLESYEMARTAGFTNINIDLISAIPKQTVRSWEETLKRI 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH---KDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +    +H+S Y L IE+GT F K++      +  LPSE     +Y  T+ I   +G H Y
Sbjct: 181 IRLKPEHISAYSLIIEEGTSFAKLYGEGSPLERDLPSEEEERLMYEKTEEILGENGYHRY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G E  HNL YW   +Y+G+G GA S +    +    S  ++   + +   + 
Sbjct: 241 EISNYAKEGMECRHNLGYWERKNYLGLGLGASSLLDNRRY----SNTENLREYTECAGQP 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
                  E L+ E+Q +EF+ +GLR   GIS + +     + +     E  R +  +G +
Sbjct: 297 EKIRKNTEHLTEEEQMEEFIFLGLRKMNGISEQAFWNCFQKTIWDCYGENIRKVMEKGLL 356

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++ +   L  T++G+ + + V A + 
Sbjct: 357 KQRE-GCLSLTKKGIDVSNYVFAEIL 381


>gi|195978320|ref|YP_002123564.1| coproporphyrinogen III oxidase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975025|gb|ACG62551.1| oxygen-independent coproporphyrinogen III oxidase 1 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 376

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 125/385 (32%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +         S+ ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLEALIKEFESY----QISSLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L  + ++  +    E TIEANP  +  +     R++ VNRIS
Sbjct: 57  YIGGGTPTAITAKQLDYLLSHLQQHLQLDQLEEFTIEANPGDLTEDKIAVLRQSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  ++ L+ +GR+H  ++  A I  L    F  +S DLIYALP QTM Q +  + +
Sbjct: 117 LGVQTFNDKQLKQIGRSHTEAQIYATIASLKEAGFQNISIDLIYALPGQTMQQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALSLDIPHLSLYSLILEHHTVFMNKMRRGKLQLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    +R  + I    + +LK V  +G+
Sbjct: 237 SNFTKPGFESRHNLMYWNNDEYFGCGAGASGYLNGIRYRNRVPI----QHYLKAV-ADGN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L+ E+  +E L +GLR + G+SV  ++   G + +       R LQ QG + +
Sbjct: 292 ARLSEEVLTKEEMMEEELFLGLRKKSGVSVSRFQEKFGLSFESRYGSVVRELQAQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                +R T++G+ + DSV     +
Sbjct: 352 -DKDFVRMTKKGLFLGDSVAEKFIL 375


>gi|324995689|gb|EGC27601.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK678]
          Length = 376

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYHSYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEKDIYDNITNLKKVGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  ++++   +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFDYVIAELGKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L+ V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            V++E L+  ++ +E + +GLR + G+S K +E   G + + +       L  QG +   
Sbjct: 293 RVQEEALTLNEKMEEEMFLGLRKKSGVSKKRFEEKFGVSFEDQYGAVVSELTEQGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDIVRMTKQGLFLGDTVAEKFIL 375


>gi|219683887|ref|YP_002470270.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|219621537|gb|ACL29694.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium animalis subsp. lactis AD011]
          Length = 420

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 129/414 (31%), Positives = 189/414 (45%), Gaps = 38/414 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQ-----WMRQLTGPR 69
              VYVH PFC+++C YCDFN++          + N+    + EM+      +       
Sbjct: 2   PFEVYVHVPFCIRRCGYCDFNTYTALDLGEGASRANYATLAIREMRVVHEWQLAHGVVEP 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             S++FFGGGTP+L+   ++  +LD + + W +  + EIT EANP SV+    +  R  G
Sbjct: 62  PASTVFFGGGTPTLLPAGDLVAMLDAVREIWGIREDAEITTEANPDSVDPGYLRLLRDGG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             RIS G+QS     LR L R HN S   A +  A  +    S DLIY  P +++  W  
Sbjct: 122 FTRISFGMQSSVPHVLRTLDRTHNPSNVAADVEAAHRLGLETSVDLIYGAPGESIEDWCD 181

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++ A+   V H+S Y LT+E  T   +    G++  P ++     Y L   + SA GL 
Sbjct: 182 SVRSAIDLGVHHISAYALTVEPHTKMGRRIAAGEIEAPDDDDEATKYELADQLLSAAGLE 241

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR----------------- 292
            YEISN +  G ES HNL YWR  D+ GIGPGAHS                         
Sbjct: 242 WYEISNWARPGHESRHNLGYWRNVDWAGIGPGAHSHYNAVRRMDMGIGHDPKAGIPVGAN 301

Query: 293 ------------VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
                       +      HP  W   ++ N     + E +  ++ A+E LM+G+RLREG
Sbjct: 302 GQGYPARDTWTSMRAWDIPHPRVWAVALQHNRVPWQDFELIDCDENAEELLMLGVRLREG 361

Query: 341 ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++V  +    G  +       L  +G + R   + L  T RG  + D VI  L 
Sbjct: 362 LNVSAFAERTGMKIPSTAIDTLVNEGLLTRSDDA-LIATLRGRLLNDLVIERLM 414


>gi|90407092|ref|ZP_01215281.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Psychromonas sp. CNPT3]
 gi|90311814|gb|EAS39910.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Psychromonas sp. CNPT3]
          Length = 379

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 123/379 (32%), Positives = 203/379 (53%), Gaps = 13/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  +  + +E ++ + + +++        R + +IF G
Sbjct: 6   PLSLYIHIPWCIEKCPYCDFNSHKLQGTIPEEAYLSALINDLKIDLVYAQGRILDTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSLI  + IA +L  I        ++EIT+EANP ++E +    +++AG++R S GV
Sbjct: 66  GGTPSLISAKGIAWLLSEIRNLIAFKKDIEITLEANPGTIENSKIADFKEAGISRFSFGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR HNA EAI A   A +      + DL++ LP Q+++    +LQ A+ 
Sbjct: 126 QSFQNDKLQRLGRIHNADEAIRAAKHAKKCAIKTFNLDLMHGLPDQSLSDALSDLQCAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T     +     +LP +++  D+    Q++ + +G   YEIS +
Sbjct: 186 LQPTHISWYQLTIEPNT----QYFSHPPILPEDDLLWDIQEAGQALLAENGYIQYEISGY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VAISIEKHPESWLKMVRKNGHA 314
           S  G E  HNLNYW + DYIGIG GAH ++ +      V     KHP+ +L+    +   
Sbjct: 242 SKKGFECQHNLNYWSFSDYIGIGCGAHGKLTLPLQNKIVRTVKVKHPKGYLQ---SDRAF 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
           + + E ++ ++ A E+++  LRL   I  + +E   G +LD   +       +  + +  
Sbjct: 299 LDKYEHVARDELAFEYMLNRLRLFVPIPFEQFESYTGLSLDSIDDPINQAVHKKLLVK-N 357

Query: 373 FSRLRCTQRGMTMLDSVIA 391
                 T  G   L+ ++A
Sbjct: 358 TDHWLVTDLGHRYLNDLLA 376


>gi|309792245|ref|ZP_07686717.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oscillochloris trichoides DG6]
 gi|308225786|gb|EFO79542.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oscillochloris trichoides DG6]
          Length = 394

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 121/395 (30%), Positives = 187/395 (47%), Gaps = 23/395 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS------- 72
            +Y+H PFC ++C YCDFNS+        E ++ +   E+  +  +T    +S       
Sbjct: 3   HLYIHIPFCHRRCSYCDFNSYANMDD-RIEPYVAALCAELAMLASITPTPPVSAEAAALR 61

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGV 130
            +IF GGGTP+++    I  +L   ++   ++   EI+ EANP ++ + +  +G R+ GV
Sbjct: 62  PTIFLGGGTPTMLTLDQIERVLVAASQIVPLAG-AEISCEANPGTLLDPDYLRGLRQLGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQSL   +LR LGR H+A EA  +   AR   F  +S D I+ LP QT+  WE 
Sbjct: 121 NRLSLGVQSLHNPTLRILGRIHSAEEAHQSYLQAREAGFESISLDFIFGLPGQTLEDWET 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L    ++  DHLSLY L +E+ T  Y     G + LP ++ +  +Y +     +A+G  
Sbjct: 181 TLNEISTWQPDHLSLYSLILEEQTPLYAQVTAGRIRLPDDDRSATMYEMAIEHLAANGYV 240

Query: 250 AYEISNHSF-------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            YEISN +              HNL YW   DY+  G GA+  + +       +     E
Sbjct: 241 QYEISNFARSHTAGPLPSHACQHNLAYWLNSDYLAAGAGAYGHLTLPPDPHRYANRLTIE 300

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---E 359
            ++  +      + E   LS      E +MMGLRL  G+    +    G  LD       
Sbjct: 301 GYMAALDAGQRPLAEIIPLSPADICAETMMMGLRLNIGVGAAHFAARCGHPLDAIYSSEI 360

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +L  QG ++R    R+  T RG  + + V     
Sbjct: 361 ADLLAQGLLQR-DTERVWLTPRGRMIGNQVFQRFL 394


>gi|15277196|dbj|BAB63287.1| ORF1 [Tetragenococcus halophilus]
          Length = 383

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 10/378 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFC   C YC+FN    + +   + +IQ  L E+Q    L    +  +I+ GGGTP
Sbjct: 11  YIHIPFCEHICFYCNFNKVFLKGQ-PVDEYIQGLLKEIQLTLDLHPTDASQTIYIGGGTP 69

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  + +  +L GI +   V +  E TIEANP  +        +  G+NR+S+GVQ+ +
Sbjct: 70  TCLSAKQLDDLLSGITQLLPVETTKEFTIEANPGDLTQEKLNVIKNYGINRLSMGVQTFD 129

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + LR +GR H A +    + L        +S DLIYALP Q++  + + L++A++  + 
Sbjct: 130 NRLLRRIGRKHTAEDVYQTLKLIEKNQIDNLSIDLIYALPAQSIADFLITLEKAIALDLP 189

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H ++Y L +E  T+F    + G + LP +     ++ L  +     G   YE+SN +  G
Sbjct: 190 HYAIYSLILENKTMFMNWVRRGKIELPEQEEEAKMFELAINEMEKAGFSHYEVSNFAKKG 249

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ES HNL YW    Y G G GA S +    ++    I    + +L ++R N   ++E E 
Sbjct: 250 WESKHNLVYWNNEHYYGFGAGASSYLNQQRYKNFGPI----QHYLNLLRNNQLPIIETEN 305

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLR 377
           LS + Q +E L +GLR +EG+S+  ++        +L  E    L     +   +   L+
Sbjct: 306 LSFKNQIEEELFLGLRKKEGVSLHRFKEKFNLELTDLYQEVLPELFDAQLLT-FKNDHLK 364

Query: 378 CTQRGMTMLDSVIANLAV 395
            T++G+ + + V     +
Sbjct: 365 LTRKGLFLGNEVFEKFLL 382


>gi|258511966|ref|YP_003185400.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478692|gb|ACV59011.1| oxygen-independent coproporphyrinogen III oxidase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 388

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 119/377 (31%), Positives = 194/377 (51%), Gaps = 12/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C YCDF + V +     E ++ + + E   M  L  P  +++ +FGGG
Sbjct: 12  SLYVHIPFCKSRCFYCDFTTFV-KSPAAMEAYVDALVAEWDLMEPLEAP--LATAYFGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L     +  +LD + + +   ++ EIT E+NP S+     +  R  GVNRIS G Q+
Sbjct: 69  TPTLFSASLLDRLLDAMRQRFEFCADAEITFESNPDSITREKLRVLRDHGVNRISFGAQA 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ +GR H       A+  AR+  FP ++ DL++ LP QT+      ++  L   
Sbjct: 129 FQDHLLQAIGRAHLRDAIEEAVWAARDLGFPHVNIDLMFGLPDQTLHDVAESVEAVLRLP 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDH+S Y L IE GT F K H+ G L LP E+   D+Y L + +    G   YEISN + 
Sbjct: 189 VDHVSAYWLKIEPGTPFAKWHEMGLLSLPGEDAEADMYRLVRDVLRDAGFVHYEISNFAR 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E+ HNL YWR   Y   G GAH   +   +    ++E+   ++L  VR+    V  +
Sbjct: 249 PGGEARHNLVYWRNEPYCASGVGAHGYARGERY----AMERRFSAYLAAVREGRRPVSAR 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           + +   ++A++ +++GLRL EG+  + +E   GR ++         L  +G +ER + S 
Sbjct: 305 QRVPVAERAEDQVILGLRLAEGVDRQRFERRFGRTIEDVFPGVVERLLAEGLLER-RGSA 363

Query: 376 LRCTQRGMTMLDSVIAN 392
            R       + +++   
Sbjct: 364 YRIPDAYWPIANAIFEQ 380


>gi|182418423|ref|ZP_02949717.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium butyricum 5521]
 gi|237666446|ref|ZP_04526431.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377805|gb|EDT75349.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium butyricum 5521]
 gi|237657645|gb|EEP55200.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 375

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 111/383 (28%), Positives = 196/383 (51%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC +KC YCDF S+  +  +  E +I++   E+    +      I+SIF 
Sbjct: 2   KEMSLYIHIPFCKQKCLYCDFPSYAGKESLINE-YIRALNEEI---LRKCSKYKIASIFV 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +   N+  +L  I        ++E TIE NP ++        +   VNRIS+G
Sbjct: 58  GGGTPSYLNEINLESLLKTI-NLLDFKDDLEFTIECNPGTLNEEKLVLMKNYNVNRISMG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+  +  L+ +GR H+  E     + AR   F  ++ DL++ LP Q M  W   L+  +
Sbjct: 117 LQTTNDNLLKEIGRIHSFEEFKKNYNQARKAGFENINVDLMFGLPNQHMKDWNASLEDVM 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   DH+S Y L IE+GT FY ++ +  L +P+E     +Y  T+     +G + YEISN
Sbjct: 177 SLEPDHISAYSLIIEEGTCFYNLYNNDKLNIPNEEEERSMYLFTKGFLEDYGYNQYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++ +  E  HN  YW+  +Y+G+G  A S V     +         + +++ +  N    
Sbjct: 237 YAKVNKECFHNKVYWKCNEYLGLGVSASSFVDEKRFKNI----DDIKIYIEKINNNEDVT 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQ 372
            E    +     +EF+ MGLR+ EGI++K ++   G+   ++  E  +N  ++G +  V 
Sbjct: 293 EEIHVNNINDDMEEFMFMGLRMIEGINLKTFKKRFGKDVFDIYDEVIKNNIKKGLLV-VD 351

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             +L  +++G+ + + V+++  +
Sbjct: 352 SEKLYLSEKGIELSNYVMSDFIL 374


>gi|325845625|ref|ZP_08168909.1| coproporphyrinogen dehydrogenase [Turicibacter sp. HGF1]
 gi|325488323|gb|EGC90748.1| coproporphyrinogen dehydrogenase [Turicibacter sp. HGF1]
          Length = 378

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 114/382 (29%), Positives = 203/382 (53%), Gaps = 11/382 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             G+Y+H PFC   C YCDF   + + +     +I++ + E++  +Q  G  ++ SI+ G
Sbjct: 2   PKGLYIHIPFCDHICTYCDFPKLLTKGQ-RHAEYIEALIQELKLYQQNVGFSNLQSIYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  + I  + D + +   ++   E +IEANP ++  +  Q  +  GVNR SLGV
Sbjct: 61  GGTPTALSVEQIQPVFDFLTEQIQMNQIQEFSIEANPENLTRDKIQYLKAQGVNRFSLGV 120

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E  L+ +GR H A E I A+ +L +     ++ DLIYA+P QT+ +   +L++ +S
Sbjct: 121 QTFHESLLKRIGRKHQAQEVIQAVANLKQCGIKNINLDLIYAIPGQTLDELRDDLRQVIS 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y L +E+ T  Y  +    + L    +   +Y +T    +  G   YEISN 
Sbjct: 181 LEVEHISAYSLIVEEHTQLYLAYMRDQIELTDNEIEAKMYEVTIETLTEAGYEHYEISNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     SLHN  YW+   YIG+G GAH  VK   ++   SI     +++++++     ++
Sbjct: 241 AKS-KPSLHNQWYWKNETYIGVGLGAHGYVKGQRYQNTRSIN----TYIELLKDGKLPMI 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQF 373
           E   L+ E+  +E + +GLRL +G+++K        N+D    +    L ++G++E+ + 
Sbjct: 296 ESHALTKEEMIEEEMFLGLRLLKGVNLKAISDKYDVNIDEIYGKAFEELIQKGYLEQKEL 355

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           + +R T  G+ M + V     +
Sbjct: 356 N-VRLTPSGLLMANEVFEQFLL 376


>gi|187778457|ref|ZP_02994930.1| hypothetical protein CLOSPO_02051 [Clostridium sporogenes ATCC
           15579]
 gi|187772082|gb|EDU35884.1| hypothetical protein CLOSPO_02051 [Clostridium sporogenes ATCC
           15579]
          Length = 383

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 114/386 (29%), Positives = 200/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  + +I++   E+      T  + I +
Sbjct: 8   DKNKEVSLYIHIPFCMQKCLYCDFTSYGKKEDLMMD-YIKALSKEI---VDNTKNKIIKT 63

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 64  IFIGGGTPTYLSLEALN-ILKDTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 122

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 123 SIGLQSSKNTLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 182

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +    +HLS Y L IE+GT FY ++K+  L LP E     +Y          G   YE
Sbjct: 183 EVVDLNPEHLSCYSLIIEEGTSFYNLYKNSLLKLPKEEEERKMYEYCIDFLKEKGYLQYE 242

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   +YIG G GAHS +    +    SI    E+++K +  N 
Sbjct: 243 ISNFANPNKECKHNLVYWDLEEYIGCGVGAHSYINNQRYENTNSI----ETYIKEINSNN 298

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIE--CERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N +DI        ++   + 
Sbjct: 299 ITQINFHINSQKENMEEFMFMGLRKTKGICMDDFQERFGQNIIDIYGSVINKYKKLNLLM 358

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             + SR+  ++  +++ ++++++  +
Sbjct: 359 EKE-SRIYLSKEAVSISNTILSDFLL 383


>gi|254421054|ref|ZP_05034778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brevundimonas sp. BAL3]
 gi|196187231|gb|EDX82207.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Brevundimonas sp. BAL3]
          Length = 390

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 160/384 (41%), Positives = 223/384 (58%), Gaps = 5/384 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSI 71
               + +G+YVHWP+C + CPYCDFN    R +V  Q   +++ L +M+  R LTG R +
Sbjct: 9   ANPGSDVGLYVHWPYCSRICPYCDFNVVRDRGRVEEQAALVEAILADMRAQRALTGSRRL 68

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +SIFFGGGTPSL+ P+  A I+      +  +  +EI++EANP+  E   F     AGVN
Sbjct: 69  ASIFFGGGTPSLMAPEAAARIIAQAYDLFPPAGAIEISLEANPTDAEAARFAALAGAGVN 128

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+S+GVQ+L++ +LRFLGR+H+A+EA  A+ LA   F R+S DLIYA P QT   W  EL
Sbjct: 129 RLSMGVQALDDAALRFLGRDHSAAEARRAVDLAGRAFSRLSIDLIYARPGQTPADWATEL 188

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL    +H+S YQLT+E  T F +    G L+ P E+ A  LY  TQ++  A G  AY
Sbjct: 189 GAALDMGFEHVSPYQLTLEPTTAFGRALARGTLIPPDEDQAAALYETTQTVLEAAGFDAY 248

Query: 252 EISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           E+SNH+  + A S HNL+ WR GDY+G+GPGAH R+ +   R A    +    ++  V  
Sbjct: 249 EVSNHARGVSARSAHNLHVWRGGDYLGLGPGAHGRLTLDGTRTATVAHRRIADYVAGVGA 308

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
            G   +E E L +   A+E L++GLR  EG  V     L G + D     +L   GF+ R
Sbjct: 309 -GSPWMETERLDAAGAAEEKLLLGLRTVEGAPVGLLADL-GLDADAAPTADLITDGFL-R 365

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +   RL  T RG  +LD V+  L 
Sbjct: 366 LSGGRLVATPRGRPVLDGVLKALL 389


>gi|303252845|ref|ZP_07339004.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648275|gb|EFL78472.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 385

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 131/390 (33%), Positives = 204/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +      S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCCHNLNYWRFGDYLAIGCGAHGKISYPTGEVYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTVDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYITETEK-HWQITQHGKLFLNELLEGFL 384


>gi|332829160|gb|EGK01824.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 376

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 125/379 (32%), Positives = 207/379 (54%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF  + R     + N++ +   EM+  +       + +I+FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDF--YTRTDMSPKHNYVSAVCREMELRKHYISNEIVKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   +   I D I  N+TV+S+ EIT+EANP  ++    +  R+   NR+S+G+QS
Sbjct: 61  TPSQLSYGDFQRIFDTIRANFTVASDAEITMEANPDDLDTKYLETLRRLPFNRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+FL R H+A  AI A+ L ++  +  +S DL+Y LP QTM  W+  L++A++  
Sbjct: 121 FDDNELKFLKRRHSAERAIDAVSLCKSSGYNNISIDLMYGLPNQTMDIWQRNLEQAINLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y L  E+GT  Y++ K GD+    E+++V +++      SA G   YEISN + 
Sbjct: 181 VQHISSYHLIYEQGTRLYRLFKLGDVKPVDEDLSVQMFSAMIDSLSAAGFQHYEISNFAR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+GP AHS           SI K+ E+  +      +  +E 
Sbjct: 241 NGLYSKHNSSYWLGEKYLGLGPAAHSFDGHNRAWNIPSISKYVEAIGQA-----NPAIET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           E L      ++F++ G+R   G+ +   E   G ++   C +N+Q+   QGF+       
Sbjct: 296 ECLDKNTSYNDFILTGMRTMWGVDLVVMESRFGTSMKDYCMKNVQKYINQGFVTNNDN-V 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T+ G+ + D ++++L 
Sbjct: 355 LKLTREGIFISDGIMSDLM 373


>gi|305681366|ref|ZP_07404173.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium matruchotii ATCC 14266]
 gi|305659571|gb|EFM49071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Corynebacterium matruchotii ATCC 14266]
          Length = 371

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 187/381 (49%), Gaps = 19/381 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            GVY+H PFC  +C YCDFN++           E ++ +   E++        R   +IF
Sbjct: 2   FGVYIHVPFCSSRCGYCDFNTYTPGELGTSASPETYLDALEQELELA---EFKRPADTIF 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+  Q +  IL  I   + ++   EIT E+NP S     F   R AG  RISL
Sbjct: 59  IGGGTPSLLGAQGLRRILTAIRNTFGINPGAEITTESNPESTSPEFFAELRDAGFTRISL 118

Query: 136 GVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS     L+ L R H       A        F  ++ D+IY  P +T    +  +++ 
Sbjct: 119 GMQSASAHVLQVLERRHTPGRAFAAVAEARAAGFAHINLDMIYGTPTETDADVQATVEQV 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  VDH+S Y L +E GT   +  + G+L  P E+V  D Y L  +   A G   YE+S
Sbjct: 179 IASGVDHVSAYSLIVEDGTRMARKVRRGELPAPDEDVYADRYALIDAALVAAGYRWYEVS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YWR  D+ G GPGAHS +      +     KHP ++ + +      
Sbjct: 239 NWAQPGGECRHNLGYWRDEDWWGAGPGAHSHLGD----LRFYNVKHPATYAQRLVSGVLP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           V   E L++ Q+ +E +M+GLRLREG+ V  +        D E  +  +  G I+ V   
Sbjct: 295 VAGVEKLTAAQRHEERVMLGLRLREGLPVTCFN-------DKELAKAREFPGLID-VSDQ 346

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           R+  T+ G  + D +IA++ V
Sbjct: 347 RVTVTEAGRLLADGMIADILV 367


>gi|154496242|ref|ZP_02034938.1| hypothetical protein BACCAP_00527 [Bacteroides capillosus ATCC
           29799]
 gi|150274325|gb|EDN01402.1| hypothetical protein BACCAP_00527 [Bacteroides capillosus ATCC
           29799]
          Length = 409

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 195/382 (51%), Gaps = 10/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  LG+Y+H PFC  KC YCDF S   R +   +++ ++ L  ++          + +I+
Sbjct: 2   TEKLGIYIHIPFCRSKCDYCDFYSLSGR-EDRMDDYQKALLAHIKETAPFAKGYQVDTIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS    + IA ++  + K + VS   E+T+EANP SV+V   +  R+AGVNR+SL
Sbjct: 61  FGGGTPSFYGEKRIAELVRAVKKRFDVSREAEVTMEANPDSVDVKMLRRLRRAGVNRLSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+  +Q LR + R H   +   A+  AR      +S DLIY LP Q M  W+  +++ 
Sbjct: 121 GAQTACDQELRAIHRPHTFEQTCQAVAAAREAKIKNLSLDLIYGLPGQDMASWQESVEQI 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   +HLS Y L +E+GT  ++    G++ LP ++   D+Y          G   YEIS
Sbjct: 181 LALKPEHLSCYGLKVEEGTPLWQRVSRGEV-LPDDDTQADMYLWMVDRLEREGYRQYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +S HNL YW    Y+G+GPGAHS      +    S  K  + ++  V + G  
Sbjct: 240 NFAKCGCQSRHNLKYWMGKPYLGLGPGAHSDFGGRRY----SFIKDLDGYISGVLEGGTV 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQ 372
           + E E +   ++  E+LM+ +R   GI   ++      N +   +     +  G+  R Q
Sbjct: 296 IDESELIPKRERGGEYLMLRMRTTRGIEEWEYRRQYYMNFEPIEQKLAEFEHHGWAAR-Q 354

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +R   T +G  + + +I  L 
Sbjct: 355 DTRWHFTPQGFLISNQLIGELL 376


>gi|84514913|ref|ZP_01002276.1| coproporphyrinogen III oxidase [Loktanella vestfoldensis SKA53]
 gi|84511072|gb|EAQ07526.1| coproporphyrinogen III oxidase [Loktanella vestfoldensis SKA53]
          Length = 382

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 176/384 (45%), Positives = 241/384 (62%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
               G+Y+HWPFC  KCPYCDFNSHV   ++  + +  ++L+E+  +   T  R + S+F
Sbjct: 7   HGGFGLYIHWPFCQAKCPYCDFNSHVVT-QIDHKAWESAYLSEISRLGAETEGRILRSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS+++P  +  +L  +   W +++++EIT+EANP+SVE   F GYR AGVNR+S+
Sbjct: 66  FGGGTPSMMDPAVVDAVLTRVRATWPMANDIEITLEANPTSVEAERFAGYRAAGVNRVSM 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+L +  L+ LGR H   EA+ A  +AR +F R+SFDLIYA   QT+  WE EL  AL
Sbjct: 126 GIQALNDPDLKALGRLHGRDEALRAFEIARGVFDRVSFDLIYARQGQTLAAWEAELAEAL 185

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           S AVDHLSLYQLTIE GT F   +  G L  LP ++ A D+Y LTQ + +AHG   YE+S
Sbjct: 186 SLAVDHLSLYQLTIEDGTAFGDRYAAGKLRGLPDDDAAADMYALTQEVCTAHGFAGYEVS 245

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           NH+  G ES+HN  YWRYGDY GIGPGAH R+ +G HR A   E  P +WL  VRK G+ 
Sbjct: 246 NHARAGCESIHNQIYWRYGDYAGIGPGAHGRLTLGGHRHATEAELSPLAWLSQVRKIGNG 305

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIER 370
            + +  L    QA E L+MG+RL EG+ ++         LDI    +    L   G +E 
Sbjct: 306 DLTRSMLDDAAQATERLLMGMRLTEGVMLER--------LDIAALSSKISYLSDIGMVE- 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           ++  RLR T  G  +L++V+  L 
Sbjct: 357 IEQGRLRATAAGRPVLNAVLRVLL 380


>gi|298483619|ref|ZP_07001794.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D22]
 gi|298270189|gb|EFI11775.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D22]
          Length = 376

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 199/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++    + I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTRYVQALCRELTMRKEYLKGKDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I +++ ++   EIT+EANP  +     +       NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGISYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEY-NGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|253579916|ref|ZP_04857184.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848915|gb|EES76877.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 380

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 125/383 (32%), Positives = 202/383 (52%), Gaps = 15/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            + + +Y+H PFC+KKC YCDF S     K  Q +++ + L E+    +    RS+SS+F
Sbjct: 8   DSPMEIYIHIPFCIKKCDYCDFLSGPSGPKE-QADYVDALLEEI-NAAEEGKGRSVSSVF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS+++ + I  IL+ I + + ++ + EITIE NP + + N  Q YR  G+NR+S+
Sbjct: 66  IGGGTPSVLDERFIGEILNHIRRKFQIADHAEITIEVNPGTADRNKLQAYRTYGINRLSI 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +++ L+ LGR HN  + +     AR   F  ++ DL+ A+P QT   W   L+  
Sbjct: 126 GLQSPDDRELKILGRIHNYEQFLETYRSAREAGFDNINIDLMSAIPDQTYEGWIHNLRTV 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                +H+S Y L IE+GT F        L LP E+   ++Y  T  I   +G   YEIS
Sbjct: 186 AGLDPEHISAYSLIIEEGTPFASR----TLNLPDEDAEYNMYEATAQILREYGFEQYEIS 241

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G E  HN+ YW   DY+G G GA S            ++K    +L+  R     
Sbjct: 242 NYAKKGRECRHNVGYWIRQDYLGFGLGASSLYGKERFANTQDMKK----YLENSRTPEKI 297

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
             ++  L+ E +  EF+ +GLR+  GIS  ++E   G  +D    +  R  +  G +   
Sbjct: 298 REKEPPLTREDEMAEFMFLGLRMTRGISKAEFERQFGSEIDAIYGDVLRKYKSMGLLLE- 356

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +  R+  ++ G+ + +SV+A+  
Sbjct: 357 ENGRIFLSREGIHVSNSVMADFL 379


>gi|227488402|ref|ZP_03918718.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227543014|ref|ZP_03973063.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227091616|gb|EEI26928.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181236|gb|EEI62208.1| coproporphyrinogen dehydrogenase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 380

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 126/384 (32%), Positives = 191/384 (49%), Gaps = 17/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTGPRS---I 71
           + G+Y+H P+C  +C YCDFN++V         + ++   E++      + TG      +
Sbjct: 2   AFGLYIHVPYCTVRCGYCDFNTYVLGSDDALPAYHEALEKELELATAQLEATGGMPADGV 61

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+IF GGGTPS++  Q +A ILD ++    ++   E+T EANP S     F   R AG  
Sbjct: 62  STIFVGGGTPSVLGGQGLARILDAVSHTMKIAPGAEVTTEANPESTSPEFFSTIRSAGFT 121

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS     LR L R H+   A+ A   A +  F  ++ DLIYA P +T       
Sbjct: 122 RVSLGMQSASPHVLRVLERQHSPQRALDAAREAIDAGFEHVNLDLIYATPGETDDDLRRS 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ ALS  +DHLS Y L +E+GT   +  + G+L +PSE +  D Y +   +    GL  
Sbjct: 182 VKLALSTGIDHLSAYSLIVEEGTALNRKVQHGELPMPSEEIMADRYEIISHMAEEAGLSW 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G E LHN+ YWR   + G GPGAHS V     +     EK P  + + + +
Sbjct: 242 YEVSNFAKPGGECLHNMGYWRSEPWWGAGPGAHSFVG----KHRWMNEKLPARYAERLGR 297

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               V  +E L+ E +  E +M+ LRL EGI            +D          G +E 
Sbjct: 298 GELPVRSEETLTDEDRYVEEVMLRLRLSEGIRRAAVHDNGQVQIDRYIAA-----GLLEE 352

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               ++R T+ G    D + A++ 
Sbjct: 353 -SGGQVRVTREGRLHADGIAADIL 375


>gi|312196045|ref|YP_004016106.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EuI1c]
 gi|311227381|gb|ADP80236.1| oxygen-independent coproporphyrinogen III oxidase [Frankia sp.
           EuI1c]
          Length = 438

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 115/394 (29%), Positives = 192/394 (48%), Gaps = 18/394 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT 66
            +      + G+Y+H P+C  +C YCDFN++      G     +F  + + E+    ++ 
Sbjct: 51  ALVELPQRAFGIYIHVPYCATRCGYCDFNTYTAAELGGGASAASFATTAIAELALAARVL 110

Query: 67  GP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           G     + ++FFGGGTP+L+ P ++  +L  +   + +    E+T EANP SV+    + 
Sbjct: 111 GDGTPPVDTVFFGGGTPTLLPPADLGALLAAVDDTFGLRPGAEVTTEANPESVDAVALEQ 170

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R AG  RIS G+QS     L  L R H        +  AR   F ++S DLIY  P ++
Sbjct: 171 LRAAGFTRISFGMQSARPHVLATLDRRHTPGRLPDVVCWARKAGFEQVSVDLIYGAPGES 230

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W   L  A+  A DH+S Y LT+E GT  ++  + G+L+ P +++  D Y     + 
Sbjct: 231 DRDWAASLAAAIELAPDHVSAYALTVEDGTRLFRRVRRGELLEPDDDLLADRYVQADEML 290

Query: 244 SAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +A GL  YE+SN +    A   HNL YWR   + G+GPGAHS V            +HP 
Sbjct: 291 AAAGLTNYEVSNWASGRDAWCRHNLGYWRGDTWWGVGPGAHSHVGGAR----WWNVRHPT 346

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            + + +R        +E + ++ +  E +M+ +R+ +G+   +    AGR+        L
Sbjct: 347 EYTERLRSGRSPAQARELVDTDARYVERVMLAVRMSDGLPAAELTE-AGRS----SLAEL 401

Query: 363 QRQGFIER--VQFSRLRCTQRGMTMLDSVIANLA 394
              G ++R  +   R++ T+ G  + D+V+  L 
Sbjct: 402 AATGLLDRAALADGRIKLTRDGRLLTDTVVRALL 435


>gi|293368829|ref|ZP_06615433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
 gi|292636134|gb|EFF54622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
          Length = 376

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 197/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R        ++Q+   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSELKP--RYVQALCRELTMRKEYLKGEDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I +++ ++   EIT+EANP  +     +       NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGISYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEY-NGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|126208323|ref|YP_001053548.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           L20]
 gi|126097115|gb|ABN73943.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 385

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 131/390 (33%), Positives = 205/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTVDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYIMETEK-HWQITQHGKLFLNELLEGFL 384


>gi|238795057|ref|ZP_04638650.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia intermedia ATCC 29909]
 gi|238725605|gb|EEQ17166.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia intermedia ATCC 29909]
          Length = 360

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 132/371 (35%), Positives = 206/371 (55%), Gaps = 17/371 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  +  V  + +++  L ++     LT  R IS+IF GGGTPSL+    +
Sbjct: 2   QKCPYCDFNSHALKGDVPHQEYVEHLLADLDADVPLTSGREISTIFIGGGTPSLLSAAAM 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +LDG+     ++++ EIT+EANP +VE + F GY++AG+NRIS+GVQS   Q L  LG
Sbjct: 62  QQLLDGVRARLPLAADAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAQKLTRLG 121

Query: 150 RNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   EA  A  LA ++  R  + DL++ LP QT+ +   +L++A++    HLS YQLT
Sbjct: 122 RIHGPDEAKRAAELATSLNLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T F         VLP ++   D++     + +A G   YE S ++ LG +  HNLN
Sbjct: 182 IEPNTGFSSRPP----VLPDDDALWDIFQQGHQLLTAAGYQQYETSAYAKLGYQCQHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YWR+GDY+GIG GAH +V     R+  +I+ KHP  +++     G  + ++  + +  + 
Sbjct: 238 YWRFGDYLGIGCGAHGKVTFSDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVETADRP 292

Query: 328 DEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
            EF M   RL E     D+    G     +  + +  L +   IE  ++   + T++G  
Sbjct: 293 FEFFMNRFRLLEAAPRADFYHFTGLAESTIRPQLDEALAKGYLIETEEY--WQITEKGKL 350

Query: 385 MLDSVIANLAV 395
            L+S++  L +
Sbjct: 351 FLNSLL-ELFL 360


>gi|145300323|ref|YP_001143164.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142853095|gb|ABO91416.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 381

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 205/382 (53%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH ++ ++    ++ + L ++    +    R +SSIF G
Sbjct: 6   PLSLYIHVPWCVQKCPYCDFNSHAQKGELPHLEYVAALLEDLDLDLKWAQGRPLSSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F G+++AG+NRIS+GV
Sbjct: 66  GGTPSLLTVEAMQTLLDGVRARIPLTPDCEITMEANPGTVEADKFAGFKQAGINRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +++ L  LGR H   E   AA        P  + DL++ LP Q++     +LQ+A+ 
Sbjct: 126 QSFQQEKLTRLGRIHGPEEARKAAALAHAIALPTFNLDLMHGLPDQSLDDALYDLQQAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLTIE  T F          LP ++   D+Y    ++ +A G   YEIS +
Sbjct: 186 CAPPHLSWYQLTIEPNTAFASKPP----RLPEDDTLWDIYEQGHAMLTARGYQQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G +  HNLNYWR+GDY+GIG GAH ++        +  +  KHP+ +L   R     
Sbjct: 242 AKAGYQCRHNLNYWRFGDYLGIGCGAHGKMTDLASGQILRSAKVKHPKGYLDPAR---PY 298

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQ 372
           + ++  ++ ++   E+ M   RL E     ++E   G  L+         Q +  IE + 
Sbjct: 299 LDKQWQVTEDELPLEYFMNRFRLFEPAPKAEFEAYTGLGLERVETMLAIAQTKELIEDL- 357

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
               + T  G   L+ V+  L 
Sbjct: 358 GDCWQLTALGHRYLN-VLLELF 378


>gi|306822818|ref|ZP_07456194.1| coproporphyrinogen dehydrogenase [Bifidobacterium dentium ATCC
           27679]
 gi|309801312|ref|ZP_07695441.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium dentium JCVIHMP022]
 gi|304553450|gb|EFM41361.1| coproporphyrinogen dehydrogenase [Bifidobacterium dentium ATCC
           27679]
 gi|308222201|gb|EFO78484.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium dentium JCVIHMP022]
          Length = 402

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 124/400 (31%), Positives = 189/400 (47%), Gaps = 31/400 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VY+H PFC+++C YCDFN++          + N+    + EM  +R       I      
Sbjct: 4   VYIHVPFCMRRCGYCDFNTYTAIDMGAGASRGNYANMVIREMAIVRDWQERHGIVEPPAD 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++++  ++  +LD + + W ++ N EIT EANP +V  +  +     G NR
Sbjct: 64  TVFFGGGTPTILKAADLVAMLDAVRETWGIADNAEITTEANPDTVNADYVRELADGGFNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H      A I  A     R S DLIY  P +++  W   + 
Sbjct: 124 ISFGMQSAVPHVLKTLDRTHTPENVEAGISAANAAGMRSSVDLIYGAPGESLDDWRTSVN 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V+H+S Y LT+   T   +    G L  P ++     Y +  ++ SA GL  YE
Sbjct: 184 TALDLEVNHISAYALTVAPNTTMGRRIAAGMLPTPDDDDEAAKYEIADALLSAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK------------- 299
           ISN +  G ES HNL YWR  D+ G+GPGAHS     +     +  +             
Sbjct: 244 ISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYDAAALSERGTARRGQADGEDSATALR 303

Query: 300 -----HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                HP  W   + + G      E ++ E+  +E +M+GLR+REG+ +       G  +
Sbjct: 304 SWDIAHPRLWGSAISEGGIPWAGSENITVEENLEETIMLGLRIREGLDIARL----GNAI 359

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                R L+  G I  ++      T RG  + D++IA L 
Sbjct: 360 AETTWRELEHDGLIT-IEHHHAIPTLRGRLLNDTIIAKLL 398


>gi|154482570|ref|ZP_02025018.1| hypothetical protein EUBVEN_00237 [Eubacterium ventriosum ATCC
           27560]
 gi|149736595|gb|EDM52481.1| hypothetical protein EUBVEN_00237 [Eubacterium ventriosum ATCC
           27560]
          Length = 404

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 123/404 (30%), Positives = 213/404 (52%), Gaps = 28/404 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N L +Y+H PFCVKKC YCDF S     +  +E ++++ + E++  +       + ++F 
Sbjct: 2   NGLEIYIHIPFCVKKCDYCDFLSAPADLET-KEKYVEALINEIKLSKNKMSEYVVDTVFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+E   I+ I+  +  N  +S N EITIE NP ++  +    Y+K+G+NRIS G
Sbjct: 61  GGGTPSLLEENQISKIMSVLRDNCNMSENPEITIECNPGTITESKLWEYKKSGINRISFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  ++ L+ +GR HN +  + + +LAR   F  ++ DL+ ALP QT+  +E  L + +
Sbjct: 121 LQSANDEELKSIGRIHNYAGFLESYNLARKCGFDNINVDLMSALPGQTLKSYEETLNKVV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL----VLPSENVAVDLYNLTQSITSAHGLHAY 251
               +H+S Y L +E+ TL Y   K   +    +LP E     +Y LT +I  ++G   Y
Sbjct: 181 RLEPEHISAYSLIVEENTLMYDRVKKAQIKGINILPDEESERKMYYLTNNILRSNGYRKY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN+S  G E  HN+ YW+  +Y+G G GA S  K   +     I K+ E     +++N
Sbjct: 241 EISNYSKPGKECKHNIGYWQRKEYLGFGIGAASLYKENRYNNISDINKYIEVLTNNIKEN 300

Query: 312 ------------------GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                                V   + L+   + +EF+ +GLR+ EG+S++ +E   G+ 
Sbjct: 301 SINNVGNSSEVENQVNILNSIVKNLQQLTERDRMEEFMFLGLRMMEGVSMEKFERYFGKP 360

Query: 354 ---LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  + ++ ++ + F+       ++ T+ G+ + + V++   
Sbjct: 361 YMEVYGKVQKRMEDKRFL-INDNGYVKLTEFGIDLSNYVMSEFL 403


>gi|239631355|ref|ZP_04674386.1| coproporphyrinogen III oxidase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525820|gb|EEQ64821.1| coproporphyrinogen III oxidase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 381

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 184/381 (48%), Gaps = 12/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G Y+H PFC   C YCDFN  V       ++++   L EM+ +        I +++ GGG
Sbjct: 3   GAYLHIPFCEHICYYCDFNK-VFIEGQPVDDYVAMLLKEMRMVMAEHPEEKIQTVYVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQ 138
           TPS + P  +A +  GI          E T EANP+ +      Q     GVNR+S+GVQ
Sbjct: 62  TPSTLTPTQLATLCQGIHDILHFDQG-EFTFEANPNDLLTTEKLQVLHDYGVNRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  LR +GR H A +   AI  AR   F  +S DLI+ LP Q+   +   LQ+AL+ 
Sbjct: 121 SFNDDVLRRIGRIHRAKDVYTAIVNARQVGFDNISIDLIFRLPDQSRDDFLTSLQKALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H S Y L +E+ T+FY + + G L LP+++V  D+Y     +  AHG H YEISN +
Sbjct: 181 DLPHYSTYSLILERKTIFYNLMRQGKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +  HNL YWR   Y G G GA   +    +     I    + +L  +  +   V+E
Sbjct: 241 KDGYQCEHNLLYWRNDKYFGFGAGAFGYLGRDRYHNYGPI----KQYLTPLHADHLPVLE 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              +   +Q +E + +GLR  +G+S   +       +D    E    L  QG + R Q  
Sbjct: 297 HHLVPQSEQIEEEMFLGLRTMQGVSEARFYDRYHMTVDAIYGETVPELVSQGLVVR-QDG 355

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +R T +G  + + V     +
Sbjct: 356 YIRLTNKGKFLGNEVFQRFLI 376


>gi|114797411|ref|YP_761982.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hyphomonas neptunium ATCC 15444]
 gi|114737585|gb|ABI75710.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Hyphomonas neptunium ATCC 15444]
          Length = 390

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 142/378 (37%), Positives = 220/378 (58%), Gaps = 4/378 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
            G+Y+HWP+C + CPYCDFN +  + +   +  + +   +++   R+L    ++ +++FG
Sbjct: 14  FGLYIHWPYCTRVCPYCDFNVYAAKDRA-TDPLVTAIADDIRVHRRKLPEHGALDTVYFG 72

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P+ +A IL   ++ + +    EIT+EANP+ V   +    R+AGV R+S+GV
Sbjct: 73  GGTPALLRPEQVAEILKAASETFGIKDGAEITLEANPNDVLKADLLALRRAGVTRLSIGV 132

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+ + +L FLGR+H A     A+  A  +F  +S DLIYA P Q+   WE EL  AL+ 
Sbjct: 133 QSMRDSALAFLGRDHTAEAGGEAVKRALKVFDTISMDLIYARPGQSPANWEAELADALAL 192

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLSLY+LT E  T F K  + G++V   ++   DLY LTQ +T   G+ AYE+SNH+
Sbjct: 193 GAPHLSLYELTFEPATAFGKAAQRGEIVPMPDDAQADLYELTQQMTRDAGMPAYEVSNHA 252

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                +S HNL YWR GD+IG GPGAH RV V  +R A   E+ PE ++  ++       
Sbjct: 253 ASPAHQSRHNLIYWRGGDWIGAGPGAHGRVSVAGNRYATEAERRPEGYMAGMQMLQEGWA 312

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           +   L     A E L MGLR  EG+ ++  E+++G+ +  E       QG++ ++Q S L
Sbjct: 313 DAAKLPPLDIAREILAMGLRAAEGVDLRRVEIVSGKKVSREKIGVFTEQGWV-KLQGSEL 371

Query: 377 RCTQRGMTMLDSVIANLA 394
             T+ G  + D++ + LA
Sbjct: 372 SLTESGRLLADALTSQLA 389


>gi|283796181|ref|ZP_06345334.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. M62/1]
 gi|291076399|gb|EFE13763.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. M62/1]
          Length = 465

 Score =  339 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 130/443 (29%), Positives = 212/443 (47%), Gaps = 60/443 (13%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           TG     L +Y+H PFC++KC YCDF S     +  +  +++    E++      G    
Sbjct: 20  TGSRPIPLELYIHIPFCIRKCAYCDFLSFPAGEEE-RSLYVEQLAREIEEAGAAFGEYVA 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPS++E   I  I+D + +++ +S   EIT+E NP +      + +R++G+N
Sbjct: 79  ETVFIGGGTPSVLEGAQIGRIMDAMRESFHLSEEAEITMEVNPGTASPEKLRSWRRSGIN 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS + + LR+LGR H A + + + H AR   F  ++ DL+ ALP QT   WE  
Sbjct: 139 RLSLGLQSAQNRELRYLGRIHTAEDFLESFHAAREAGFENINVDLMSALPGQTEEAWEDT 198

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-------------VLPSENVAVDLYN 237
           L++ LS   +H+S Y L IE+GT FY+ +    +              LP E+    +Y 
Sbjct: 199 LKKVLSLMPEHISAYSLIIEEGTPFYEKYGTEGMERKGKARARADLPPLPDEDTERSMYE 258

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
            T+ I S  G H YEISN++  G E  HN  YW   +Y+G+G GA S +           
Sbjct: 259 ATERILSEAGYHRYEISNYARPGFECRHNRGYWTGTEYLGLGLGASSYIIRNREADLGGC 318

Query: 291 ----------HRVAISIEKHPESWLKMVRKN---GHAVVEKEFLSSEQQADEFLMMGLRL 337
                                  +L   R++   G     ++ L+ + + +EF+ +GLRL
Sbjct: 319 PDEAGLLALSGAERFLNTPDMGKYLAYSREDFRAGRHTEGRDRLTWKDRMEEFMFLGLRL 378

Query: 338 REGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ---------------------- 372
            EG++ +++E   G  +     + L+   R+G +E V                       
Sbjct: 379 TEGVAEQEFEHRFGCPIRQVYGKALEECVREGLMEYVHDPACSGSVSPNGLVQTQGKEAL 438

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            SR R T RG+ + + V+A   +
Sbjct: 439 DSRWRLTGRGVDVSNWVLAKFLI 461


>gi|119946667|ref|YP_944347.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychromonas ingrahamii 37]
 gi|119865271|gb|ABM04748.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychromonas ingrahamii 37]
          Length = 380

 Score =  339 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 199/379 (52%), Gaps = 15/379 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  R +V ++ ++ + L ++         R + +IF G
Sbjct: 6   PLSLYIHIPWCIEKCPYCDFNSHKLRGEVPEKEYLHALLEDLSNDLVYVQGRVLETIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    I  +L  I K      N+EIT+EANP ++E      ++  G+NR S GV
Sbjct: 66  GGTPSLLSASGIGWLLTEIEKKIPFKKNMEITLEANPGAIENQKIADFKAFGINRFSFGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L  LGR H   EA  A   A ++  +  + DL++ LP Q++     +LQ A+ 
Sbjct: 126 QSFQQDKLTKLGRIHGVEEAKTAARQAHHVGMKTFNLDLMHGLPDQSLDDALSDLQTAID 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T F+        VLP +++  ++    Q + + +G   YEIS +
Sbjct: 186 LNPTHISWYQLTIEPNTQFFSKPP----VLPEDDLLWEIQEKGQQLLADNGYIQYEISAY 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI--EKHPESWLKMVRKNGHA 314
             +G E LHNLNYW++GDYIGIG GAH ++ +      +     KHP+ +L+  R     
Sbjct: 242 GKVGFECLHNLNYWKFGDYIGIGCGAHGKLTLPLQNKILRTVKVKHPKGYLEPTRAYLDH 301

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
           + + E       A E+++  LRL E +   ++E   G +L+   +  +  + +   +E  
Sbjct: 302 INQVE---KSDLAFEYMINRLRLFEAVPFTEFEDFTGLSLESIKLPLQTAIAKNLLVE-- 356

Query: 372 QFSRLRCTQRGMTMLDSVI 390
                + +  G   L+ ++
Sbjct: 357 NEQSWQVSPLGYRYLNDLL 375


>gi|326797256|ref|YP_004315076.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
 gi|326548020|gb|ADZ93240.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
          Length = 390

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 128/396 (32%), Positives = 207/396 (52%), Gaps = 19/396 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQL 65
           M+      L +Y+H P+CV+KCPYCDFNSH         K+ ++ ++   L +++     
Sbjct: 1   MSNLTLPPLSLYIHAPWCVRKCPYCDFNSHQADRFEENGKLPEDAYLDQLLADLEVDLPY 60

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R I + F GGGTPSL+ P     +++ +        + EIT+EANP + E   F  +
Sbjct: 61  VANRPIQTAFIGGGTPSLMSPDFYYRLMEALKSKLAWVDDAEITMEANPGTFEQEKFAHF 120

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTM 184
           R+AG+NR+S+G+QS     L+ LGR HN  EAI A+  +R   F  ++ DL++ LP Q++
Sbjct: 121 RQAGINRLSIGIQSFHTNLLKTLGRIHNREEAIMAVEKSRLAGFDNINLDLMHGLPDQSV 180

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +LQ A+  A +HLS YQLTIE  T FY+        LP +N    + +   ++  
Sbjct: 181 DMALKDLQLAMDLAPEHLSWYQLTIEPNTEFYRRPP----ELPEDNTLWGIQDEGLALLE 236

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPES 303
           + G   YE+S ++  G  + HNLNYWR+GDY+GIG GAH ++ + +  +      +HP  
Sbjct: 237 SQGYQQYEVSANARAGKHAQHNLNYWRFGDYLGIGAGAHGKITLENGEIFRTRKTRHPNH 296

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +L  + +   A+  KE + +E    EF+M  LRL E   + D+     R    +     Q
Sbjct: 297 YLSNLPE---ALGTKEQIETEDLPLEFMMNRLRLFETFDLADFSRFTYREAPEKLIAGCQ 353

Query: 364 R---QGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
           +    GFI++      +++ T +G   L+ ++    
Sbjct: 354 KALELGFIDQDAWHECKVKTTSKGKLFLNELLEIFL 389


>gi|320160979|ref|YP_004174203.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
           thermophila UNI-1]
 gi|319994832|dbj|BAJ63603.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
           thermophila UNI-1]
          Length = 405

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 124/389 (31%), Positives = 204/389 (52%), Gaps = 18/389 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFF 76
            + +Y+H PFCV +C YCDFN++    K     + ++   E+  + +      S+ +IFF
Sbjct: 15  PVSIYIHIPFCVHRCAYCDFNTYAGMEK-WIPAYTEALCREIAVVSEAAPEGISVQTIFF 73

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +    +  +L  +  ++ V    EI++EANP +VE + F+  R+AG NR+S+G
Sbjct: 74  GGGTPSYLSASLLNKVLHTVRSHFQVMEKAEISLEANPGTVEPHLFEELREAGFNRLSIG 133

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS   + L+FL R H   +   ++  AR   F  ++ DLI+ +P QT+  W+  L+ AL
Sbjct: 134 MQSAIPKELKFLTRIHTVEDVQNSVIQARKAGFQNINLDLIFGIPGQTIQTWKNSLEFAL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   +H+SLY LT+E+GT      ++G + +PS++ A +LY  +    +  G   YEISN
Sbjct: 194 SLQPEHVSLYSLTVEEGTPLNHWVEEGKISMPSDDDAAELYEYSMDAMAEAGYLQYEISN 253

Query: 256 HSFLG-----AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
            +            HNL YWRY  Y+G G G+H   +       + I ++    +K +  
Sbjct: 254 WAKQDLNGDWLMCRHNLQYWRYLPYLGFGAGSHGFFENTRISNVLGIPEYINR-IKSLSS 312

Query: 311 NGHA----VVEKEFLSSEQQADEFLMMGLRL-REGISVKDWEMLAGRNLDIECERN---L 362
           +       V +   L  ++Q  EF+M+GLRL  EG+S+ ++    G +L     +    L
Sbjct: 313 HQFPASAAVDQILILDRQEQMKEFMMVGLRLTHEGVSLLEFYHRFGVSLLEVFGKEIEFL 372

Query: 363 QRQGFIER-VQFSRLRCTQRGMTMLDSVI 390
             +G IE   +  RLR T+RG  + + V 
Sbjct: 373 LARGLIEWFNENKRLRLTKRGKLLGNQVF 401


>gi|319440581|ref|ZP_07989737.1| coproporphyrinogen III oxidase [Corynebacterium variabile DSM
           44702]
          Length = 385

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 179/385 (46%), Gaps = 16/385 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
           G+Y+H PFC  +C YCDFN++            ++ +   E+ +   +   P   S++F 
Sbjct: 4   GLYIHVPFCTTRCGYCDFNTYTPGEDGTSSVGTYLNALEAELDRAAAEWDRPGPPSTVFL 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+    +  +L  + ++  ++   E+T E+NP S     F    +AG  RISLG
Sbjct: 64  GGGTPSLLGADGLTRVLGAVRRSLGLAPGAEVTTESNPESTSPEFFSALLEAGYTRISLG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ L RNH    A AA   A    F  ++ DLIY  P +T       +  AL
Sbjct: 124 MQSASAHVLKVLERNHTPGRATAAAQEALAAGFDHVNLDLIYGTPTETDDDLRRSIDAAL 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  VDH+S Y L +E GT   +  + G L  P E+V  D Y +  +     G+  YE+SN
Sbjct: 184 STGVDHISAYSLIVEDGTAMARKVRKGQLPAPDEDVYADRYEMIDAALQDAGMGWYEVSN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-----KHPESWLKMVRK 310
            S  G E  HNL YWR G + G GPGAH  V++  H  +  I      K P  + + +  
Sbjct: 244 WSRQGGECRHNLVYWRGGQWWGAGPGAHGCVRLHGHGSSTGITRLVNAKLPRRYAEALAS 303

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               VV  E LS      E +M GLRL EG+               +        G +E+
Sbjct: 304 GDSPVVTTEPLSDADVHTERIMTGLRLAEGLPDDMVAH------APQAVARHVGLGLLEQ 357

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           V   R R T  G  + D +I ++ V
Sbjct: 358 VD-GRTRLTDAGRLLADGIITDILV 381


>gi|295092111|emb|CBK78218.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium cf. saccharolyticum K10]
          Length = 462

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 130/443 (29%), Positives = 213/443 (48%), Gaps = 60/443 (13%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           TG     L +Y+H PFC++KC YCDF S     +  +  +++    E++      G    
Sbjct: 20  TGSRPIPLELYIHIPFCIRKCAYCDFLSFPAGEEE-RSLYVEQLAREIEEAGAAFGEYVA 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPS++E   I  I+D + +++ +S   EIT+E NP +      + +R++G+N
Sbjct: 79  ETVFIGGGTPSVLEGAQIGRIMDAVRESFHLSEEAEITMEVNPGTASPEKLRSWRRSGIN 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS + + LR+LGR H A + + + H AR   F  ++ DL+ ALP QT   WE  
Sbjct: 139 RLSLGLQSAQNRELRYLGRIHTAEDFLESFHAAREAGFENINVDLMSALPGQTEEAWEDT 198

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-------------VLPSENVAVDLYN 237
           L++ LS   +H+S Y L IE+GT FY+ +    +              LP E++   +Y 
Sbjct: 199 LKKVLSLMPEHISAYSLIIEEGTPFYEKYGTEGMERKGKARARADLPPLPDEDMERSMYE 258

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS------- 290
            T+ I S  G H YEISN++  G E  HN  YW   +Y+G+G GA S +           
Sbjct: 259 ATERILSEAGYHRYEISNYARPGFECRHNRGYWTGTEYLGLGLGASSYIIRNREADLGGC 318

Query: 291 ----------HRVAISIEKHPESWLKMVRKN---GHAVVEKEFLSSEQQADEFLMMGLRL 337
                                  +L   R++   G     ++ L+ + + +EF+ +GLRL
Sbjct: 319 PDEAGLLALSGAERFLNTPDMGKYLAYSREDFRAGRHTEGRDRLTWKDRMEEFMFLGLRL 378

Query: 338 REGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ---------------------- 372
            EG++ +++E   G  +     + L+   R+G +E V                       
Sbjct: 379 TEGVAEQEFEHRFGCPIRQVYGKALEECVREGLMEYVHDPACSGSVSPNGLVQTQGKEAL 438

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            SR R T RG+ + + V+A   +
Sbjct: 439 DSRWRLTGRGVDVSNWVLAKFLI 461


>gi|186681618|ref|YP_001864814.1| coproporphyrinogen III oxidase [Nostoc punctiforme PCC 73102]
 gi|186464070|gb|ACC79871.1| putative oxygen-independent coproporphyrinogen III oxidase [Nostoc
           punctiforme PCC 73102]
          Length = 393

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 127/386 (32%), Positives = 202/386 (52%), Gaps = 20/386 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF   V   ++  E       +++    E+        P  + +
Sbjct: 13  SAYVHIPFCRRRCFYCDFPVSVVGDRLRGETSDTISQYVEVLCKEIAITPAFGQP--LKT 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+  + +  I+  + K++ ++S  EI++E +P + ++ +  GYR AGVNR+
Sbjct: 71  IFFGGGTPSLLSTEQLQRIVGELEKHFGIASGAEISMEIDPGTFDLAHIAGYRSAGVNRV 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +E+ L+  GR+H+  +  AA+ L   +  P  S DLI  LP Q++ QW+  L 
Sbjct: 131 SLGVQAFQEELLQRAGRSHSVEDIFAAVELIHQVEIPAFSLDLISGLPHQSLDQWQNSLT 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    H+S+Y LTIE GT F + +K GD  LP++   V +Y + Q   +  G   YE
Sbjct: 191 KAVALLPTHISIYDLTIEPGTAFGRYYKPGDTPLPTDEATVKMYQMGQQALTGAGYEHYE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++    +  HN  YW    Y G G GA S V+        +  +    + + V+  G
Sbjct: 251 ISNYAQPKHQCRHNRVYWENRPYYGFGMGAASYVEGKR----FTRPRKTREYYQWVQAGG 306

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIE 369
             V++ +    ++   E LM+GLRL EG+S+       G     E  R LQ    +G++E
Sbjct: 307 --VIDCDVTPPKEVLLETLMLGLRLAEGLSLAALVEAFGEEKVEEICRCLQGYFDKGWVE 364

Query: 370 RVQFSRLRC-TQRGMTMLDSVIANLA 394
             +  RLR    +G    + V+A L 
Sbjct: 365 VTE-GRLRLIDPQGFLFSNVVLAQLF 389


>gi|145595970|ref|YP_001160267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salinispora tropica CNB-440]
 gi|145305307|gb|ABP55889.1| coproporphyrinogen III oxidase, anaerobic [Salinispora tropica
           CNB-440]
          Length = 407

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 124/393 (31%), Positives = 193/393 (49%), Gaps = 15/393 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT 66
            +T  G+   GVYVH PFC  +C YCDFN++      G   +E +  + L E+    ++ 
Sbjct: 21  ALTSVGARGFGVYVHVPFCASRCGYCDFNTYTAAELGGGASREEYADTVLAELALAARVL 80

Query: 67  G---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           G   P  + ++F GGGTP+L+   ++A ILD I + W ++++ E+T EANP SV   +  
Sbjct: 81  GENRPSRVDTVFVGGGTPTLLPAADLARILDAIDRTWGLATDAEVTTEANPESVTPRSLA 140

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
             R AG  RISLG+QS     L  L R H+      AA       F  ++ DLIY  P +
Sbjct: 141 ALRAAGYTRISLGMQSASPGVLAILDRRHSAGRAIAAAGEAREAGFDHVNLDLIYGTPGE 200

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +   +   L   ++  VDH+S Y L +E+GT      + G++  P ++VA D Y   ++ 
Sbjct: 201 SAADFAASLDEVVAAGVDHVSAYSLIVEEGTRLAAQVRRGEVAQPCDDVAADRYLAAEAA 260

Query: 243 TSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
             A G   YE+SN S    A   HNL YW  G++ G+GPGAHS V      V     KHP
Sbjct: 261 LDAAGFSWYEVSNWSRTPAARCRHNLLYWTGGNWWGLGPGAHSHVGG----VRWWNVKHP 316

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            ++ + +       + +E L++++   E +M+ LRL  G+ +   + +     D      
Sbjct: 317 TAYAQRLAAGASPGLAREVLTADEAYLEDVMLRLRLAAGLPLDVLDPVGRAGADRARAAG 376

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L  +         R   T RG  + D+V+ +L 
Sbjct: 377 LLAE---AAYGDGRAVLTLRGRLLADAVVRDLL 406


>gi|119512056|ref|ZP_01631150.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
 gi|119463282|gb|EAW44225.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
          Length = 393

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 117/386 (30%), Positives = 199/386 (51%), Gaps = 20/386 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF  +V   ++  E       +++    E+           + +
Sbjct: 13  SAYVHIPFCRRRCFYCDFPVYVVGDRLRGETSGTISQYVEVLCQEIAMTAA--SGEPLKT 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+  + +  IL  + K + +++  EI++E +P + ++ +  GY   GVNR+
Sbjct: 71  IFFGGGTPSLLSIEQLQQILVTLEKQFGIAAGAEISMEVDPGTFDLAHLSGYGSVGVNRV 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +++ L+  GR+H+  + + ++ L   +     S DLI  LP Q++ QW+  L+
Sbjct: 131 SLGVQAFQQELLQVAGRSHSVVDILTSVELIHQVEIAEFSLDLISGLPHQSLEQWQDSLK 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++    H+S+Y LTIE GT F + +K GD  LP++   V +Y   Q + ++ G   YE
Sbjct: 191 QAVTLMPTHISIYDLTIEAGTAFGRYYKPGDKPLPTDETTVKMYETAQQVLTSAGYEHYE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y   G GA S ++        +  +  + + + V+  G
Sbjct: 251 ISNYARPGHQCQHNRVYWENRPYYAFGMGAASYIEGKR----FTRPRKTQEYYQWVKAGG 306

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIE 369
             V++ E    ++   E LM+GLRL EG+S+       G     E   C +      ++E
Sbjct: 307 --VIDCEVTPPKEVLLETLMLGLRLAEGVSLAMLTQKFGEEKLKEIHQCLQPYLENSWVE 364

Query: 370 RVQFSRLRCT-QRGMTMLDSVIANLA 394
                RLR +  +G    + V+A+L 
Sbjct: 365 VF-GGRLRLSDPQGFLFSNVVLADLF 389


>gi|296113214|ref|YP_003627152.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis RH4]
 gi|295920908|gb|ADG61259.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis RH4]
 gi|326560207|gb|EGE10595.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 7169]
 gi|326562766|gb|EGE13062.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 103P14B1]
 gi|326564945|gb|EGE15147.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 46P47B1]
 gi|326567876|gb|EGE17977.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 12P80B1]
 gi|326573317|gb|EGE23285.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis 101P30B1]
 gi|326575787|gb|EGE25710.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis CO72]
 gi|326576867|gb|EGE26773.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis O35E]
          Length = 391

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 137/396 (34%), Positives = 213/396 (53%), Gaps = 19/396 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           ++       L +Y+H P+CVKKCPYCDFNSH    +V  EN+I++ L++    + L   R
Sbjct: 4   DLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNR 63

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++F GGGTPSL+  ++   + DG+   +  +   EIT+EANP ++E + F  Y   G
Sbjct: 64  QIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIG 123

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           +NR+S+GVQS +  +L  LGR HN  +A  AI  AR   F R++ DL+Y LP Q  ++  
Sbjct: 124 INRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAV 183

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++Q A+     HLS YQLTIE  T FY         LP E +  ++  L QS+ + HG 
Sbjct: 184 NDIQTAIDAGATHLSWYQLTIEPNTTFY----CTPPQLPDEEIMAEIETLGQSVLTKHGF 239

Query: 249 HAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------RVAISIEKHP 301
           + YE+S       A   HNLNYW++GDY+ IG GAH ++ + +H             + P
Sbjct: 240 YNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQP 299

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIEC 358
           + +L    ++   +V  E +S +    EF+M  LRL++G+S   +E   G     +D E 
Sbjct: 300 KDYLAF--EDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEM 357

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              LQ QG +  +   R+  T+ G   ++ +++   
Sbjct: 358 L-PLQHQGLMV-LDPLRIAPTRLGFRYVNYLVSQFI 391


>gi|153854185|ref|ZP_01995493.1| hypothetical protein DORLON_01484 [Dorea longicatena DSM 13814]
 gi|149753234|gb|EDM63165.1| hypothetical protein DORLON_01484 [Dorea longicatena DSM 13814]
          Length = 368

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 128/389 (32%), Positives = 201/389 (51%), Gaps = 34/389 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFCVKKC YCDF S     +  QE ++     +++    L G   +SSIF 
Sbjct: 2   RPLELYIHIPFCVKKCRYCDFLSAPATPEARQE-YVMGLCQKIRSYYDLAGMYHVSSIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++E Q +  I D I   + + S+ EIT+E NP +V+      YR  G+NR+S+G
Sbjct: 61  GGGTPSILETQQMRSIFDAIRATFPIDSDAEITVEVNPGTVDKLKLMAYRNVGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS ++Q L+ LGR H   + +    LAR   F  ++ DL+  +P QT+  WE  L++  
Sbjct: 121 LQSTDDQELKMLGRIHTYKDFLDTYTLAREVGFQNINVDLMSGIPFQTLGGWEDTLKKVA 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH-------KDGDLVLPSENVAVDLYNLTQSITSAHGL 248
               +H+S Y L IE+GT FY+ +             LP E+    +Y  T++I  ++G 
Sbjct: 181 ELGPEHISAYSLIIEEGTPFYEKYGEGERAEARRRRELPDEDTERMMYQFTKNILWSYGY 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           H YEISN++  G E  HNL YW   +Y+GIG GA S +                      
Sbjct: 241 HRYEISNYAKEGYECRHNLGYWNRTEYLGIGTGAASLINNQRFV---------------- 284

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQ 365
            + G    E E LS + Q +E++ +GLR  EG+S  D+    GR+++    + L    ++
Sbjct: 285 -EGG----EIEVLSLQNQMEEYMFLGLRKIEGVSKTDFRQTFGRSIENAYGKVLIDMYQK 339

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +E      +R T++G+ + + V++   
Sbjct: 340 QLLEDT-GEYIRLTEKGIDVSNYVMSEFL 367


>gi|262374093|ref|ZP_06067370.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262311104|gb|EEY92191.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 384

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 130/384 (33%), Positives = 209/384 (54%), Gaps = 16/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK----VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH           ++ ++ + + + +   ++   R I S
Sbjct: 10  PLSLYIHMPWCVRKCPYCDFNSHAVPDGQLSMDLEQQYLTALVADFETQVEMAQGRLIHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSLI  Q    + D +    + S + EIT+EANP +VE ++F  Y   G+NR+
Sbjct: 70  VFIGGGTPSLISAQGYQWLFDQLKARLSFSDDCEITLEANPGTVEHDSFADYLSVGINRL 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS + + L+ LGR H+A  A+ AI  AR   F R++ DL++ LP QT+ Q   +L+
Sbjct: 130 SIGVQSFDTEHLQRLGRIHSAHNAMDAIQQARQAGFERVNVDLMHGLPSQTVEQALTDLK 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+ +   H+S YQLTIE  T+F++        LP + +   +  L ++   A+G   YE
Sbjct: 190 LAVEHGATHISWYQLTIEPNTVFFR----TQPALPQDEILEQIQELGEAYLIANGFINYE 245

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  V    
Sbjct: 246 VSAW-RKAKPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAEH 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL--QRQGFIER 370
             +   E   +++   EF+M  LRL EG++ + ++   G +L+   +  L   RQ  +  
Sbjct: 305 LQMKRIE---ADELPFEFMMNALRLNEGVAAELYQQRTGLDLN-HLQMPLSKLRQKKLLL 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
              S++ CT++G   L+SV+ +  
Sbjct: 361 DDTSKIACTEQGHIFLNSVLESFL 384


>gi|170760466|ref|YP_001788275.1| coproporphyrinogen III oxidase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407455|gb|ACA55866.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 380

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 110/386 (28%), Positives = 198/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFVHSFKIARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +  + +HLS Y L IE+ T F+ ++++  L LP E     +Y          G   YE
Sbjct: 180 KVVDLSPEHLSCYSLIIEEETTFHNLYENSLLKLPKEEEERKMYEYCIDFLKEKGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTNSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LTRINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ ++++++  +
Sbjct: 356 EKEN-RICLSKEAVSISNTILSDFLL 380


>gi|217967496|ref|YP_002353002.1| oxygen-independent coproporphyrinogen III oxidase [Dictyoglomus
           turgidum DSM 6724]
 gi|217336595|gb|ACK42388.1| oxygen-independent coproporphyrinogen III oxidase [Dictyoglomus
           turgidum DSM 6724]
          Length = 377

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 209/384 (54%), Gaps = 13/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            SN +G+Y+H PFCV+KCPYCDF S  R  K  +E +I   L E+    +     +I +I
Sbjct: 3   SSNPIGIYIHIPFCVRKCPYCDFVSF-RYSKEEEERYISHLLREIDMKSK---GETIDTI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS++  + +  I + I + + +S  VEI++E NP +V+    + +++ G+NRIS
Sbjct: 59  YLGGGTPSILSLKGLEKIFEFIQEKFKLSKGVEISMEVNPGTVDREKIKVWKELGINRIS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS  E+ L+ LGR H+  +     H+ R   F  ++ DLIY+LP Q    +   L+ 
Sbjct: 119 IGAQSFIEKELKILGRIHDTDDIYKTFHMLREADFKNINIDLIYSLPFQEQEDFYFSLKE 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+    +H+S+Y L IE+GTLFYKM+ +  + LP  ++  ++++   +    +G   YEI
Sbjct: 179 AVKLNPEHISIYNLMIEEGTLFYKMYLESKIKLPDSDMEAEMFSFAMNYLKDNGFIHYEI 238

Query: 254 SNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN S     +  HNL YW    Y G G  A+S      +       ++   +   ++K  
Sbjct: 239 SNFSKNENYKCKHNLKYWNQEKYYGFGVSAYSYDPPVRYGNC----RNLYVYYGKIKKGI 294

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIER 370
             + E+EFL+ ++ A +FL + LRL EGIS K++E    + ++  ++        G I+ 
Sbjct: 295 LPIEEREFLTGDKLAKDFLFLRLRLMEGISKKEFENRFDKRIEYFMKNYSVFLENGLIKE 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +  R+  T++G+ + + +  ++ 
Sbjct: 355 -EGDRVALTEKGILLANEIFQDIL 377


>gi|325689791|gb|EGD31795.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK115]
 gi|325696409|gb|EGD38299.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK160]
          Length = 376

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIQNQP-----VDSYLEHLIEEYNSYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSAHQLAFLLEKLTDKLDLSYLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ LR +GR+H   +    I  L +  F  +S DLIYALPKQTM   +  + +A
Sbjct: 118 GVQTFNDRMLRQIGRSHLEKDIYENIADLKKAGFDNISIDLIYALPKQTMEDVKTNVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + H+SLY L +E  T+F    + G L LP E++  +++    +     G   YEIS
Sbjct: 178 IALDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V   G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLHAVEA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERV 371
            V++E L+ +++ +E + +GLR R G+S K +E   G + + +      +L  +G +   
Sbjct: 293 RVQEEVLTLKEKMEEEMFLGLRKRAGVSKKRFEEKFGVSFEDQYGAVVADLTERGLLVP- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
               +R T++G+ + D+V     +
Sbjct: 352 DRDMVRMTKQGLFLGDTVAEKFIL 375


>gi|126666573|ref|ZP_01737551.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
 gi|126628961|gb|EAZ99580.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
          Length = 383

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 126/390 (32%), Positives = 203/390 (52%), Gaps = 14/390 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           N        +L +Y+H P+CV+KCPYCDFNSH     + +  ++++ L ++    +L   
Sbjct: 4   NRTPAAVEPALSLYLHVPWCVRKCPYCDFNSHAITGDIPESVYLKALLDDLDQDLRLAAG 63

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R I ++F GGGTPSL+     + +   +      +++ EIT+EANP ++E   F+ +R+A
Sbjct: 64  RVIQTVFIGGGTPSLMSGGFYSDLFRQLKTRLEFAADAEITLEANPGTLEQGRFEAFREA 123

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+GVQS   + L+ LGR H++  A  AI  AR   F   + DL++ LP QT  Q 
Sbjct: 124 GINRLSIGVQSFNPEQLKVLGRIHDSQAAHNAITAARQAGFDNFNIDLMHGLPGQTPEQA 183

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L +ALSY   HLS YQLT+E  T FY         LP ++   D+Y+       +HG
Sbjct: 184 LDDLAQALSYQPPHLSWYQLTVEPNTEFYSQPP----ELPDDDRLWDIYSQGGDYLRSHG 239

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLK 306
              YE+S  S     S HNLNYW +GDY+ +G G H ++     ++      + P+++L 
Sbjct: 240 FTDYEVSAWSQHNMASRHNLNYWTFGDYLALGAGGHGKISQPDGQILRYWKTRQPQAYLN 299

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQR 364
            +   G      E ++  ++  EFLM  LRL  G+    ++   G  L         L++
Sbjct: 300 RI---GSRTAGSEAIAVAERPLEFLMNALRLGAGVPENLFQQRTGLPLSTIAVQLEALRQ 356

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +G +      R++ T+ G   L+S++    
Sbjct: 357 EGLM---HPQRIQATELGQRYLNSLLQRFL 383


>gi|307250085|ref|ZP_07532048.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306857882|gb|EFM89975.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
          Length = 385

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 131/390 (33%), Positives = 204/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++  G +  HNLNYW +GDY+ IG GAH +V   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKGYQCRHNLNYWHFGDYLAIGCGAHGKVSYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTMDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYITETEK-HWQITQHGKLFLNELLEGFL 384


>gi|311895980|dbj|BAJ28388.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Kitasatospora setae KM-6054]
          Length = 409

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 114/395 (28%), Positives = 183/395 (46%), Gaps = 17/395 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK------VGQENFIQSFLTEMQWMR 63
            + G G    G Y+H P+C  +C YCDFN++             QE +  + + E++  R
Sbjct: 21  ALHGLGERPFGFYLHVPYCASRCGYCDFNTYTATELRSSGAVASQETYADNVIAEIRQAR 80

Query: 64  QLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           ++ G     + ++F GGGTP+L+  +++  +L  + + + ++   E+T EANP SV+   
Sbjct: 81  RVLGEVDLPVETVFLGGGTPTLLPARDLVRMLAALREEFGLAPGAEVTTEANPESVDPAY 140

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NRIS G+QS     L  L R+H      A +  AR   F  ++ DLIY  P
Sbjct: 141 LAELREGGYNRISFGMQSARPHVLALLDRHHTPGRPEACVAEARAAGFAHVNLDLIYGTP 200

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   W++ L  A+    DH+S Y L +E GT      K G+L +  ++V  D Y + +
Sbjct: 201 GESDQDWQVSLDAAIGAGPDHVSAYSLIVEDGTRLAARVKRGELPMIDDDVHADRYLMAE 260

Query: 241 SITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +  +A G H YE+SN +        HN  YW   D+ G GPGAHS V      V     K
Sbjct: 261 TALAAAGYHWYEVSNWATTPEGRCRHNELYWTGADWWGAGPGAHSHVGG----VRWWNAK 316

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP ++ + + +     + +E L+ E +  E +++ LRL EG  +                
Sbjct: 317 HPAAYAQALAEGRTPALGREVLADEDRRVERILLELRLAEGCPLDLLTAAGRAAAARALA 376

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L            R   T RG  + D V+ +L 
Sbjct: 377 DGLLDP---VPYAAGRAALTLRGRLLADGVVRDLV 408


>gi|300788491|ref|YP_003768782.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
 gi|299798005|gb|ADJ48380.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
          Length = 410

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 122/393 (31%), Positives = 186/393 (47%), Gaps = 12/393 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQ 64
           E+ + G GS + GVYVH PFC  +C YCDFN++           E++++    E++   +
Sbjct: 23  ESALKGLGSRAFGVYVHVPFCATRCGYCDFNTYTAGELDSGSSPESWLEGLRRELELAAR 82

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L  P +  ++F GGGTPSL+    +  +LD +   + ++   E+T E+NP S     F 
Sbjct: 83  TLVVPPAADTVFVGGGTPSLLGADGLRSVLDAVRDVFGLAPGAEVTTESNPESTSPEFFA 142

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQ 182
           G R+AG  RISLG+QS     L+ L R H       AA       F  ++ D+IY  P +
Sbjct: 143 GIREAGYTRISLGMQSAAPHVLKILDRVHTPGRPGKAAAEARAAGFEHVNLDVIYGTPGE 202

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                   L   L+  VDH+S Y L +E+GT   +  + G+L  P ++V    Y +  ++
Sbjct: 203 RADDLRATLDAVLAAGVDHVSAYALIVEEGTALARRVRRGELPAPDDDVLAADYEMIDAM 262

Query: 243 TSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            S+ GL  YE+SN +    A   HNL YWR  D+ G GPGAHS V      V     KHP
Sbjct: 263 LSSAGLRWYEVSNWAASDAARCRHNLGYWRGDDWWGAGPGAHSHVGG----VRWWNVKHP 318

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +  ++         +E L+ + Q  E +M+ LR+ EG+ +   +              
Sbjct: 319 ARYAALLAGGDSPAAGREVLTDDDQHLERIMLELRVAEGLPLDVLDAPGLAEARAAAAEG 378

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L     ++     R   T RG  + D V+  LA
Sbjct: 379 LLDPSALD--SRGRAVLTDRGRLLADGVVRRLA 409


>gi|229916350|ref|YP_002884996.1| coproporphyrinogen III oxidase [Exiguobacterium sp. AT1b]
 gi|229467779|gb|ACQ69551.1| oxygen-independent coproporphyrinogen III oxidase [Exiguobacterium
           sp. AT1b]
          Length = 384

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 189/380 (49%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN    + +   ++++ +   EM    +      I +IF GGG
Sbjct: 4   AVYLHIPFCEHICYYCDFNKVFLKNQ-PVDDYLDALKREMVLTLEAFPTERIDTIFIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+ +  + +A ++D + ++     S ++E ++EANP+ V        +  GVNR+S GV
Sbjct: 63  TPTALNEEQMARLMDMVRQHLLPLASDDLEYSVEANPNFVSAEKLDTMKAGGVNRLSFGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+ ++  L  +GR H A +    +  A   F  +S DL++ LP+QT+ Q + +L  AL  
Sbjct: 123 QTFDDGGLERIGRTHRADDVFETVSEAAKRFDNISIDLMFGLPEQTLEQIDRDLALALQL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +E  T+F    + G L LP E+V V++Y         HGL  YEISN+ 
Sbjct: 183 PIQHVSSYSLILEPHTVFAIQDRKGKLRLPGEDVEVEMYLKVMETLERHGLKQYEISNYG 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YWR  +Y G G GAHS +          I  +       ++  G  V  
Sbjct: 243 LPGRESRHNQVYWRNEEYYGFGAGAHSYLNGTRRANIAPIPHY-------IKAEGIPVKR 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFS 374
              L   ++ +E L +GLR+R G+S++ +E   G +LD         L ++  IER   +
Sbjct: 296 VTELEEVEKMEEELFLGLRMRSGVSLQTFEQKYGVSLDDVFGHVIEELVKKSLIERTD-T 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R T  G+ + +   A   
Sbjct: 355 HIRLTASGLPLANEAFAAFI 374


>gi|302381544|ref|YP_003817367.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192172|gb|ADK99743.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 383

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 158/381 (41%), Positives = 227/381 (59%), Gaps = 5/381 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              + VYVHWP+C + CPYCDFN    R ++  Q   +++ LT++     L G R ++SI
Sbjct: 5   PGPVAVYVHWPYCARICPYCDFNVVRDRGWRDEQAVLVEAILTDLSAQAALVGARPLASI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P ++A +++     +     VEIT+EANP+  E  +F   R AGV+R+S
Sbjct: 65  FFGGGTPSLMRPDDVARVVERARALFPSGEPVEITLEANPTDAEAAHFAALRDAGVDRLS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL++ +L FLGRNH+A+EA  AI  A   F R+S DLIYALP QT+  W   L  A
Sbjct: 125 LGVQSLDDAALAFLGRNHSAAEARRAIETAGATFDRLSIDLIYALPGQTVHAWSDALTEA 184

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++   +H+S Y LTIE  T F + ++ G LV P E+ A DLY  TQ++  A G  AYE+S
Sbjct: 185 VAMGFEHVSPYHLTIEAATAFGRAYERGTLVPPDEDRAADLYEATQAVLGAAGFEAYEVS 244

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           NH+  + A S HNL+ WR  DYIG+GPGAH R+ +   R A   E+    +++ V  +G 
Sbjct: 245 NHARGVAARSAHNLHVWRGHDYIGVGPGAHGRLTLDGVRTATVAERRIGPYVEGV-ASGA 303

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
              E   L + + A+E +++GLR  EG+++ D   L G  +       L   GF+  ++ 
Sbjct: 304 PWSETARLDARETAEERVLLGLRTVEGVALGDLSGL-GLPVAAGPVAALIEDGFVA-IEE 361

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            RL  T RG  +LD+V+  L 
Sbjct: 362 GRLAATARGRPVLDAVLKALL 382


>gi|229824134|ref|ZP_04450203.1| hypothetical protein GCWU000282_01438 [Catonella morbi ATCC 51271]
 gi|229786488|gb|EEP22602.1| hypothetical protein GCWU000282_01438 [Catonella morbi ATCC 51271]
          Length = 390

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 189/379 (49%), Gaps = 11/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC K C YC FN      +    +++ S   EM     L   + + +++ GGG
Sbjct: 5   AAYIHIPFCKKICHYCAFNKFFYDGQ-PVGDYLASLDQEMAAY-DLDQKQPLDTLYIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  +L  I +   ++   E + E NP  + +   +  +  GVNRIS+GVQ+
Sbjct: 63  TPSCLSLSELDYLLASIHRRLPLTDKTEFSFEINPGELSLEKCRLLKDQGVNRISMGVQT 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ LR +GRNH   +   +I   R   F  +S DLI+ LP+QT+  ++  L +ALS  
Sbjct: 123 FNDRLLRKIGRNHREKQIYQSIDWFRQVGFDNLSIDLIFRLPEQTLADFDESLTKALSLD 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY L IE  T+F ++ + G L LPSE+V  D++ L        G+  YE+SN + 
Sbjct: 183 LPHYSLYSLIIENQTVFQQLMRQGKLPLPSEDVDADMFQLAIDRLREAGIEQYEVSNFAK 242

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YWRY  Y G G GAH  +    +     +      +LK +R     +++ 
Sbjct: 243 PGFESQHNLGYWRYTPYYGFGAGAHGFLDGTRYYNHGPVH----HYLKQLRAGNKPIIDA 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSR 375
             L    Q +EFL + LR  +G+ + D+    G   ++      ++Q   G +   + +R
Sbjct: 299 SPLDLVDQMEEFLFLALRTTQGVCLTDFYDRFGHRAEVLFADFFRQQAERGLLIE-ESNR 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T RG+ + D V  +L 
Sbjct: 358 IYLTTRGLFLADLVFRDLI 376


>gi|146296756|ref|YP_001180527.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410332|gb|ABP67336.1| coproporphyrinogen III oxidase, anaerobic [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 376

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 118/381 (30%), Positives = 187/381 (49%), Gaps = 10/381 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDF S+          +  S   E+ + ++      I +I+ 
Sbjct: 3   KKIGLYIHIPFCKKKCLYCDFVSYESVENGLVSEYFDSLQRELIFYKE-NYDIEIETIYI 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++ + I  ++  I  N+ V  N E TIEANP S+     + Y+   +NR+S+G
Sbjct: 62  GGGTPSAVDTKYIERLIGFIYSNFKVDENCETTIEANPESLNKEKLKVYKLLNINRLSIG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  L+ LGR H +  A+  + LA   F   + DL+  LP Q +  +   L+ A+S
Sbjct: 122 IQSLNDIELKALGRIHTSKRALEILELAARYFENFNIDLMIGLPYQNIESFSKTLETAIS 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   H+S+Y L IE+GT FY  ++      P E     +Y L        G++ YEISN 
Sbjct: 182 FGPPHVSVYSLKIEEGTYFYDAYEFLKSYFPPEKEERSMYWLAVERLYDFGIYQYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    E  HNL YW    YIGIG  +HS  +   +    S     + ++  ++    AV 
Sbjct: 242 ARKKFECKHNLKYWDCESYIGIGSSSHSFFEGYRY----SNVSDIKEYINSIKNGYLAVD 297

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
            KE++  E+   E++++GLR  EGI +   E     +   +       L++ G +E    
Sbjct: 298 TKEYIDDEEMEKEYIILGLRKIEGIDLLKLERRFNIDFMKKYKTQIEKLRKYGLVEI--N 355

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           S  R T++GM   + V     
Sbjct: 356 SHFRLTKKGMDFANIVWQEFI 376


>gi|50842395|ref|YP_055622.1| coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202]
 gi|282854145|ref|ZP_06263482.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J139]
 gi|50839997|gb|AAT82664.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes KPA171202]
 gi|282583598|gb|EFB88978.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J139]
          Length = 393

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 122/392 (31%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDFN++V           ++ +   E++      G     
Sbjct: 14  ADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPP 73

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 74  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 133

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 134 NRLSMGMQSADENVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENRDSWRY 193

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 194 SLDATLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 253

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 254 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 310 NVLDDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 362

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 363 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 393


>gi|41408305|ref|NP_961141.1| coproporphyrinogen III oxidase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396661|gb|AAS04524.1| HemN [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 390

 Score =  338 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 186/380 (48%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIF 75
             G+YVH PFCV +C YCDFN++      G   + ++ +  TE++       P  ++++F
Sbjct: 20  PFGLYVHVPFCVTRCGYCDFNTYTPAELGGVNPDAWLGALRTELELAAARLRPPPVNTVF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+    +AL+LD + +++ ++ + EIT EANP S     F     AG  R+SL
Sbjct: 80  VGGGTPSLLGGARLALLLDMVREHFALAPDAEITTEANPESTWPEFFDAIGAAGYTRVSL 139

Query: 136 GVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS+  + L  L R H  +  A AA       F  +S DLIY  P ++       L  A
Sbjct: 140 GMQSVAPRVLGVLDRIHTPNRSADAAREALAAGFEHVSLDLIYGTPGESDEDLLWSLDTA 199

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   VDH+S Y L +E+GT   +  + G+L  P ++V    Y L  +  S  GL  YE+S
Sbjct: 200 IESGVDHVSAYALVVEEGTALARRVRRGELAAPDDDVLAHRYELVDARLSQAGLSWYEVS 259

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G +  HNL YW  G + G GPGAH  V            KHP ++ + +      
Sbjct: 260 NWSRPGGQCRHNLGYWDGGQWWGAGPGAHGYVGTTR----WWNVKHPNAYAERLNAAALP 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           V   E L SE    E +++ +RLR+G  V         + + E  + +   G + R    
Sbjct: 316 VAGFEQLGSEALHTEDVLLKIRLRQGFPVDLLN-----SAERERAQGVVADGLLVR-DGD 369

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T RG  + D V+  L 
Sbjct: 370 RLVLTPRGRLLADGVVRTLL 389


>gi|262377346|ref|ZP_06070570.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262307799|gb|EEY88938.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 384

 Score =  338 bits (868), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 133/389 (34%), Positives = 204/389 (52%), Gaps = 16/389 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK----VGQENFIQSFLTEMQWMRQLTGP 68
              +  L +Y+H P+CV+KCPYCDFNSH           ++ ++++ + + +        
Sbjct: 5   NPAAVPLSLYIHMPWCVRKCPYCDFNSHAVPDGQLSLELEQEYLRALVEDFKTQVDFAQG 64

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R I S+F GGGTPSLI       + D +      +   EIT+EANP +VE + F GY +A
Sbjct: 65  RQIHSVFIGGGTPSLISAPGYQWLFDQLKAVIPFAEGCEITLEANPGTVEHDPFAGYLQA 124

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+S+GVQS   + L+ LGR H+  +AI+AI LAR   F R++ DL++ LP+QT+ Q 
Sbjct: 125 GINRLSIGVQSFNTEHLKRLGRIHSNEDAISAIGLAREAGFQRINVDLMHGLPEQTLDQA 184

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L+ A+     H+S YQLTIE  T+F++       +LP + V  D+    +    A G
Sbjct: 185 LHDLKLAVEQGATHISWYQLTIEPNTVFFR----TQPILPVDEVLEDIQEQGELYLKAQG 240

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  
Sbjct: 241 FINYEVSAWRKE-LPSAHNLNYWQFGDYLAIGAGAHGKVTQPDGVYRFQKTRLPKDYLAK 299

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQ 365
           V       V+ + +       EF+M  LRL +G+  K +    G +LD   E   +L+ +
Sbjct: 300 VPAEH---VQFKRIEDTDLPFEFMMNALRLNQGVEAKLYAERTGLSLDTLDELLSSLRDR 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +      RL CT++G   L+SV+    
Sbjct: 357 KLMV-DDQDRLSCTEQGHIFLNSVLEEFL 384


>gi|307254679|ref|ZP_07536507.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307259123|ref|ZP_07540853.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306862352|gb|EFM94318.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306866790|gb|EFM98648.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 385

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 130/390 (33%), Positives = 204/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +   G R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKSYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTVDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYITETEK-HWQITQHGKLFLNELLEGFL 384


>gi|225021766|ref|ZP_03710958.1| hypothetical protein CORMATOL_01794 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945462|gb|EEG26671.1| hypothetical protein CORMATOL_01794 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 371

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 186/381 (48%), Gaps = 19/381 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            GVY+H PFC  +C YCDFN++           E ++ +   E++        R   +IF
Sbjct: 2   FGVYIHVPFCSSRCGYCDFNTYTPGELGTSASPETYLDALEQELELA---EFKRPADTIF 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+  Q +  IL  I   + ++   EIT E+NP S     F   R AG  RISL
Sbjct: 59  IGGGTPSLLGAQGLRRILTAIRNTFGINPGAEITTESNPESTSPEFFAELRDAGFTRISL 118

Query: 136 GVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS     L+ L R H       A        F  ++ D+IY  P +T    +  +++ 
Sbjct: 119 GMQSASAHVLQVLERRHTPGRAFAAVAEARAAGFAHINLDMIYGTPTETDADVQATVEQV 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  VDH+S Y L +E GT   +  + G+L  P E+V  D Y L  +   A G   YE+S
Sbjct: 179 IASGVDHVSAYSLIVEDGTRMARKVRRGELPAPDEDVYADRYALIDAALVAAGYRWYEVS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G E  HNL YWR  D+ G GPGAHS +      +     KHP ++ + +      
Sbjct: 239 NWAQPGGECRHNLGYWRDEDWWGAGPGAHSHLGD----LRFYNVKHPATYAQRLASGVLP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           V   E L++ Q+ +E +M+GLRLREG+ V  +        D E  +  +  G I+ V   
Sbjct: 295 VAGVEKLTAAQRHEERVMLGLRLREGLPVTCFN-------DKELAKAREFPGLID-VSDQ 346

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            +  T+ G  + D +IA++ V
Sbjct: 347 WVTVTEAGRLLADGMIADILV 367


>gi|314923123|gb|EFS86954.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL001PA1]
 gi|314966890|gb|EFT10989.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL082PA2]
 gi|314981234|gb|EFT25328.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA3]
 gi|315091802|gb|EFT63778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA4]
 gi|315093189|gb|EFT65165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL060PA1]
 gi|315103305|gb|EFT75281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA2]
 gi|315105512|gb|EFT77488.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL030PA1]
 gi|327327714|gb|EGE69490.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL103PA1]
          Length = 397

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 122/392 (31%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDFN++V           ++ +   E++      G     
Sbjct: 18  ADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPP 77

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 78  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 137

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 138 NRLSMGMQSADENVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENRDSWRY 197

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 198 SLDATLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 257

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 258 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 313

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 314 NVLDDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 366

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 367 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 397


>gi|332883638|gb|EGK03919.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           mossii DSM 22836]
          Length = 376

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 115/380 (30%), Positives = 208/380 (54%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF  + R     + +++ +   E++  +   G   + +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDF--YTRTDMSPKYDYVSALCEEIKLRKNYIGDEDVKTVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK-AGVNRISLGVQ 138
           TPS +   +   I + +   + ++ + EIT+EANP  +  +     ++    NR+S+G+Q
Sbjct: 61  TPSQLSESDFLRIFETLHHEFRIAPDAEITMEANPDDLSAHYLATLKEKLPFNRLSIGIQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L+FL R H+A +A  A+ + +++    +S DL+Y LP QTM  WE  L+ A++ 
Sbjct: 121 SFDDEELKFLKRRHSADKAKEAVRMCQSLGYNNISIDLMYGLPNQTMQIWERNLEEAIAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y L  E+GT  Y++ K GD+    E+++VD+++      +A G   YEISN +
Sbjct: 181 DVQHISSYHLIYEQGTRLYRLFKMGDVNPVDEDLSVDMFSRMIEKLTAAGFDHYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW    Y+G+GP AHS           SI K+ E       +  +  +E
Sbjct: 241 RHGLYSKHNSSYWLGKKYLGLGPAAHSYDGQNRSWNVASISKYIEGI-----RTENPNLE 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
            E L    + ++F++ G+R + G+++ + E L G  +   C +N ++   QGF+      
Sbjct: 296 IEALDENTKYNDFILTGMRTKWGVNLSELESLFGTKMKAFCLKNARKYLDQGFLTEKDN- 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L+ T++G+ + D ++++L 
Sbjct: 355 ILKLTRQGIFISDGIMSDLM 374


>gi|171743009|ref|ZP_02918816.1| hypothetical protein BIFDEN_02134 [Bifidobacterium dentium ATCC
           27678]
 gi|283455975|ref|YP_003360539.1| coproporphyrinogen III oxidase [Bifidobacterium dentium Bd1]
 gi|171278623|gb|EDT46284.1| hypothetical protein BIFDEN_02134 [Bifidobacterium dentium ATCC
           27678]
 gi|283102609|gb|ADB09715.1| Coproporphyrinogen III oxidase [Bifidobacterium dentium Bd1]
          Length = 402

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 123/400 (30%), Positives = 187/400 (46%), Gaps = 31/400 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRSI-----S 72
           VY+H PFC+++C YCDFN++          + N+    + EM  +R       I      
Sbjct: 4   VYIHVPFCMRRCGYCDFNTYTAIDMGAGASRGNYANMVIREMAIVRDWQERHGIVEPPAG 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP++++  ++  +LD + + W ++ N EIT EANP +V  +  +     G NR
Sbjct: 64  TVFFGGGTPTILKAADLVAMLDAVRETWGIADNAEITTEANPDTVNADYVRELADGGFNR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L+ L R H      A I  A     R S DLIY  P +++  W   + 
Sbjct: 124 ISFGMQSAVPHVLKTLDRTHTPENVEAGISAANAAGMRSSVDLIYGAPGESLDDWRTSVN 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   V+H+S Y LT+   T   +    G L  P ++     Y +  ++ SA GL  YE
Sbjct: 184 TALDLGVNHISAYALTVAPNTTMGRRIAAGMLPTPDDDDEAAKYEIADALLSAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK------------- 299
           ISN +  G ES HNL YWR  D+ G+GPGAHS     +     +  +             
Sbjct: 244 ISNWARPGYESRHNLGYWRNVDWAGLGPGAHSHYDAPALFERGTARRGQADGEDSATALR 303

Query: 300 -----HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                HP  W   + +        E ++ E+  +E +M+GLR+R G+ +       G  +
Sbjct: 304 SWDIAHPRLWGSAISEGRIPWAGSENITVEENLEETIMLGLRIRGGLDIARL----GNAI 359

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                R L+  G I  V+      T RG  + D++IA L 
Sbjct: 360 AETTWRELEHDGLIT-VEHHHAIPTLRGRLLNDTIIAKLL 398


>gi|303251293|ref|ZP_07337471.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252474|ref|ZP_07534370.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307256900|ref|ZP_07538678.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|302649835|gb|EFL80013.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860066|gb|EFM92083.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306864634|gb|EFM96539.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
          Length = 385

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 129/390 (33%), Positives = 203/390 (52%), Gaps = 25/390 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + +  +IQ  L ++       +     R I S
Sbjct: 7   PLSLYIHIPWCVQKCPYCDFNSHAQKGVIPEAEYIQHLLADLSQDLTAYQTAIRDRKIHS 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   + IA +L  + K      ++EIT+EANP + E   F GY + GV RI
Sbjct: 67  IFIGGGTPSLFSAEGIAYLLAEVEKRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRI 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           S+G+QS E + L  LGR H+++EA  A+    + A++     + DL++ LP Q++ Q   
Sbjct: 127 SMGIQSFEPEKLLKLGRIHDSNEAKQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALD 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++ ++ A  HLS YQLTIE  T+FY         LP ++   D++     + +A G  
Sbjct: 187 DLRQGIALAPPHLSWYQLTIEPNTMFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYE 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE S ++    +  HNLNYWR+GDY+ IG GAH ++   +  +   S  KHP+ +++  
Sbjct: 243 QYETSAYAKKSYQCRHNLNYWRFGDYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-- 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQR 364
              G     ++ +    +  EF M   RL E    +++E   G  LD E  R        
Sbjct: 301 ---GEYRYSQDLIELADRPFEFFMNRFRLLEATPKQEFEFYTG--LDREIVRPTVDWALS 355

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           + +I   +    + TQ G   L+ ++    
Sbjct: 356 KNYITETEK-HWQITQHGKLFLNELLEGFL 384


>gi|50914136|ref|YP_060108.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS10394]
 gi|50903210|gb|AAT86925.1| Coproporphyrinogen oxidase, anaerobic [Streptococcus pyogenes
           MGAS10394]
          Length = 408

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 34  SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 89  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 149 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAK 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 209 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 269 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 323

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 324 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVK 383

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 384 -DDAFVRMTKKGLFLGDSVAERFIL 407


>gi|294649161|ref|ZP_06726602.1| coproporphyrinogen dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824959|gb|EFF83721.1| coproporphyrinogen dehydrogenase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 384

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 132/389 (33%), Positives = 207/389 (53%), Gaps = 16/389 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGP 68
              +  L +Y+H P+CV+KCPYCDFNSH           ++ ++ + + + +   ++   
Sbjct: 5   NPANIPLSLYIHMPWCVRKCPYCDFNSHAVPDGHLSMDLEQQYLAALVADFETQIEMAQG 64

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           RSI S+F GGGTPSLI  Q    + + +       ++ EIT+EANP +VE + F  Y   
Sbjct: 65  RSIHSVFIGGGTPSLISAQGYQWLFEQLKARLGFEADCEITLEANPGTVEHDPFADYLAV 124

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G+NR+SLGVQS + + L+ LGR H AS A+ AIH AR   F R++ DL++ LP+QT  Q 
Sbjct: 125 GINRLSLGVQSFDTEHLQRLGRIHTASNALDAIHQARQAGFERVNVDLMHGLPQQTEQQA 184

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +LQ A+ +   H+S YQLTIE  T+F++       VLP + V   +    ++   A+G
Sbjct: 185 LADLQLAVEHGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEHIQAEGEAYLKANG 240

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+S        S HNLNYW++GDY+ IG GAH +V            + P+ +L  
Sbjct: 241 YVNYEVSAWRKE-KPSAHNLNYWQFGDYLAIGAGAHGKVTHPEGVYRFQKTRLPKDYLAK 299

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQ 365
           V       V+ + + +++ A EF+M  LRL +G+    +E   G +L         L+ +
Sbjct: 300 VPAEH---VQMKRIEADELAFEFMMNALRLNDGVEATLYEQRTGLSLAELTPILNTLREK 356

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +      R+ CT++G   L++V+    
Sbjct: 357 KLLV-AAADRIACTEQGHIFLNTVLEAFL 384


>gi|88855044|ref|ZP_01129709.1| oxygen-independent coproporphyrinogen III oxidase protein [marine
           actinobacterium PHSC20C1]
 gi|88815572|gb|EAR25429.1| oxygen-independent coproporphyrinogen III oxidase protein [marine
           actinobacterium PHSC20C1]
          Length = 416

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 116/406 (28%), Positives = 182/406 (44%), Gaps = 30/406 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQL 65
           E+           VY+H PFC  +C YCDFN++         + ++    + EM     +
Sbjct: 19  ESAAVDSDCRPWSVYIHVPFCRVRCGYCDFNTYTSEELRGAKRSDYATEAIAEMSLASGV 78

Query: 66  TGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                   R  S++FFGGGTP+L+   ++  +L    + W  +S+VE+T EANP SV+  
Sbjct: 79  LAQAGVALREASTVFFGGGTPTLLPVTDLTRMLTAARETWGFTSDVEVTTEANPDSVDRE 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
                + AG  R+S G+QS     L  L R H+       +  AR +   +S DLIY  P
Sbjct: 139 YLLALKDAGFTRVSFGMQSAVPHVLATLERTHDPERVPHVVKWAREVGLDVSLDLIYGTP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +++  WE  L   +S   DH+S Y L IE GT      + GD+    +++  D+Y L +
Sbjct: 199 GESLADWERSLDHVISQNPDHVSAYALIIETGTKLAGQIRRGDVAPVDDDLQADMYELAE 258

Query: 241 SITSAHGLHAYEISNHSFLGAE------SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
               A G   YE+SN +    +      S HNL YW   D+ GIGPGAHS V      V 
Sbjct: 259 QKLHAAGYEWYEVSNWAKRTDDPAISNTSRHNLGYWLGNDWWGIGPGAHSHVGG----VR 314

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-----EML 349
               KHP ++   +         +E L+   +  E +++  R+R G+ +        + +
Sbjct: 315 WWNVKHPAAYADRIAAGHSPAAGRETLADSSKYLEHVLLRARVRNGLHINTLDADGRKAV 374

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           AG   +   +     +G IE         T +G  + D+V+  L  
Sbjct: 375 AGLIAEELVDARAALKGTIE--------LTLKGRLLADAVVRRLLA 412


>gi|326570282|gb|EGE20327.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis BC8]
 gi|326571019|gb|EGE21043.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis BC7]
          Length = 391

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 137/396 (34%), Positives = 214/396 (54%), Gaps = 19/396 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           ++       L +Y+H P+CVKKCPYCDFNSH    +V  EN+I++ L++    + L   R
Sbjct: 4   DLLDPAHIPLSLYIHMPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNR 63

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++F GGGTPSL+  ++   + DG+   +  +   EIT+EANP ++E + F  Y   G
Sbjct: 64  QIDTVFIGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIG 123

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           +NR+S+GVQS +  +L  LGR HN  +A  AI  AR   F R++ DL+Y LP Q  ++  
Sbjct: 124 INRLSIGVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAV 183

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++Q A+     HLS YQLTIE  T FY+        LP E +  ++  L QS+ + HG 
Sbjct: 184 NDIQTAIDAGATHLSWYQLTIEPNTTFYRTPP----QLPDEEIMAEIETLGQSVLTKHGF 239

Query: 249 HAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------RVAISIEKHP 301
           + YE+S       A   HNLNYW++GDY+ IG GAH ++ + +H             + P
Sbjct: 240 YNYEVSAWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQP 299

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIEC 358
           + +L    ++   +V  E +S +    EF+M  LRL++G+S   +E   G     +D E 
Sbjct: 300 KDYLAF--EDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEM 357

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              LQ QG +  +   R+  T+ G   ++ +++   
Sbjct: 358 L-PLQHQGLMV-LDPLRIAPTRLGFRYVNYLVSQFI 391


>gi|46204805|ref|ZP_00049452.2| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Magnetospirillum magnetotacticum MS-1]
          Length = 438

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 121/392 (30%), Positives = 183/392 (46%), Gaps = 28/392 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT----- 66
            +   GVY+H PFC  +C YCDFN++      G   Q ++  + L E+    ++      
Sbjct: 31  ATRGFGVYLHVPFCSVRCGYCDFNTYTASELGGGASQASYASTALREIDLAARVLHDAGL 90

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R +S++F GGGTP+L+   ++  +L G+   W ++ + E+T EANP SV   +     
Sbjct: 91  PERPVSTVFVGGGTPTLLPAGDLVRLLGGVRDAWGLAPDAEVTTEANPDSVTPESLAELA 150

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG  R+S G+QS     L  L R H+       +  AR+   ++S DLIY  P +++  
Sbjct: 151 AAGFTRVSFGMQSAVPHVLATLERTHDPRRIPDVVRWARDAGLQVSLDLIYGTPGESLDD 210

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L+ AL+  VDH+S Y L +E GT      +  ++ LPSE+     Y L   + +A 
Sbjct: 211 WRASLEAALATGVDHVSAYALVVEAGTKMAAQVRRWEVALPSEDDQATKYELADELLTAA 270

Query: 247 GLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRV------------KVGSHRV 293
           GL  YE+SN +   A    HNL YWR  D+ GIGPGAHS V            +     V
Sbjct: 271 GLTWYEVSNWARTEADRCRHNLAYWRGDDWWGIGPGAHSYVAATGAAPAGASPEDARVGV 330

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                KHP  +  ++         +E L+  +   E  M+G+RLREG+ +      AGR+
Sbjct: 331 RWWNVKHPRRYAALLEAGTSPAAGRELLTRTEGRLEQAMLGVRLREGLDLAALS-PAGRH 389

Query: 354 LDIECERNLQRQGFIE--RVQFSRLRCTQRGM 383
                   L   G ++       R     RG 
Sbjct: 390 ----AVAGLVANGLLDGRAAVAGRAVLNLRGR 417


>gi|256825009|ref|YP_003148969.1| coproporphyrinogen III oxidase, anaerobic [Kytococcus sedentarius
           DSM 20547]
 gi|256688402|gb|ACV06204.1| coproporphyrinogen III oxidase, anaerobic [Kytococcus sedentarius
           DSM 20547]
          Length = 411

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 118/393 (30%), Positives = 191/393 (48%), Gaps = 23/393 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWM-----RQL 65
             +  +Y+H PFC  +C YCDFN++       +     + ++     E+           
Sbjct: 26  EETFSLYLHVPFCSVRCGYCDFNTYTLTELGDETGASLDTWVDGVAAELDLAVRVLTADG 85

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                + ++F GGGTPSL+  +++   L+ + + + V+ ++E+T EANP  V+     G 
Sbjct: 86  GALPVVDTVFVGGGTPSLLGAEDLGRALEVVRERFAVAEDLEVTTEANPDQVDEEFAWGL 145

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            +AG  R+S+G+QS     L  L R H+ +    A+   R     +S DLI+  P +++ 
Sbjct: 146 AEAGYTRMSVGMQSAVPHVLATLDRTHDPANVERAVEAGRAAGLAVSVDLIHGTPGESLV 205

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   ++ A++   DH+S Y LTIE+GT  ++    G+L  P E+   D Y L   +  A
Sbjct: 206 DWRASVEAAIALRPDHVSAYALTIEEGTALHRRVARGELPEPDEDDQADKYELADDLLGA 265

Query: 246 HGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            G   YE+SN +   A    HN +YW  G + G+GPGAHS V      V     KHP +W
Sbjct: 266 AGYGWYEVSNWARTEAGRCRHNEHYWDGGHWWGVGPGAHSHVGG----VRFWNVKHPRAW 321

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            + +         +E L++EQ  +E +M+G+R REG+++ D     GR         L  
Sbjct: 322 AQRLSTGVTPAAAREVLTAEQVTEERVMLGIRRREGLALDDVPA-EGRG----AVAALIG 376

Query: 365 QGFIE---RVQFSRLRCTQRGMTMLDSVIANLA 394
            G +E    V+  RL  T+RG  + D V+  L 
Sbjct: 377 DGLLEGVPAVRDRRLVLTRRGRLLADLVMGRLL 409


>gi|188588627|ref|YP_001920250.1| coproporphyrinogen III oxidase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498908|gb|ACD52044.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 379

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 193/383 (50%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC +KC YCDF S+  + K     +I +   E+   +       I SIF 
Sbjct: 7   KEISLYIHIPFCKQKCLYCDFPSYSGKEK-FISGYIGALNKEI---KDKASSYKIKSIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++   +  +L  I     +  N+E TIE NP S+  +  +  +K  VNRIS+G
Sbjct: 63  GGGTPSYLDEIELEKLLKCINTLM-LGENLEFTIECNPGSLSEDKLKIMKKYNVNRISMG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ +GR H   E      LAR   F  ++ DL++ LP Q++  W   L++ +
Sbjct: 122 LQSTKPSLLKEIGRIHTFEEFENNYLLARKVGFKNINIDLMFGLPNQSVEDWRKTLEKII 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  +H+S Y L IE+GT FY ++    L LPSE    D+Y LT+     +G   YEISN
Sbjct: 182 EFNPEHISAYSLIIEEGTCFYNLYNQDKLNLPSEEKERDMYLLTKKFLKENGYSQYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    E  HN+ YW+  +Y+G+G  + S ++       I      E ++K +  N    
Sbjct: 242 FSKDKKECYHNIVYWKLNEYLGLGVSSSSYIEGKR----IKNIDDIELYIKNINSNESVE 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
            E    +     +EF+ MGLR+  GI  +D++    +++D      +    +Q  + R  
Sbjct: 298 NEIYENNINDDMEEFMFMGLRMIRGIEERDFKERFKKDIDEVYGDVIYKNIKQELLIR-N 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  T RG+ + +SV+++  +
Sbjct: 357 GGRIYLTSRGIEVSNSVMSDFII 379


>gi|251778618|ref|ZP_04821538.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243082933|gb|EES48823.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 379

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 195/383 (50%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC +KC YCDF S+  + K     ++ +   E+   +       I SIF 
Sbjct: 7   KEISLYIHIPFCKQKCLYCDFPSYSGKEK-FISGYMGALNKEI---KDKASSYKIKSIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++   +  +L  I    T+  N+E TIE NP S+  +  +  +K  VNRIS+G
Sbjct: 63  GGGTPSYLDEIELEKLLKCINTL-TLGENLEFTIECNPGSLSEDKLKIMKKYNVNRISMG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ +GR H   E      LAR   F  ++ DL++ LP Q++  W   L++ +
Sbjct: 122 LQSTKPSLLKEIGRIHTFEEFENNYLLARKVGFKNINIDLMFGLPNQSVEDWRKTLEKII 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  +H+S Y L IE+GT FY ++    L LPSE    D+Y LT+ I   +G   YEISN
Sbjct: 182 EFNPEHISAYSLIIEEGTCFYNLYNQDKLNLPSEEKERDMYLLTKKILKENGYSQYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    E  HN+ YW+  +Y+G+G  + S ++       I      E ++K +  N    
Sbjct: 242 FSKDKKECYHNIVYWQLNEYLGLGVSSSSYIEGKR----IKNIDDIELYIKNINSNQSVE 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
            E    +     +EF+ MGLR+  GI  +D++    +++D      +    +Q  + R  
Sbjct: 298 NEIYENNINDDMEEFMFMGLRMIRGIEERDFKERFKKDIDEVYGDVIYKNIKQELLIR-N 356

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  T RG+ + +SV+++  +
Sbjct: 357 GGRIYLTSRGIEVSNSVMSDFII 379


>gi|229543801|ref|ZP_04432860.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           coagulans 36D1]
 gi|229324940|gb|EEN90616.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           coagulans 36D1]
          Length = 377

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 185/380 (48%), Gaps = 10/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  + + +   + +I+  L EM+          +S++F GGG
Sbjct: 3   AAYIHVPFCEHICYYCDFNKFLLKGQ-PVDEYIEMLLEEMRIKTAEAPCEKLSTVFVGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I        + E T EANP        +     GVNR+S GVQS
Sbjct: 62  TPTALNERQLEKLLAAIRTILPYDGDGEFTFEANPGETSEEKLRLLHDYGVNRLSFGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L  +GR H   +    I  AR I F  +S DL++ALP QT+  +   L  ALS  
Sbjct: 122 FNDRLLEKIGRTHRREDVYRTISHARKIGFSNISMDLMFALPGQTLEDFRETLDEALSMG 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L IE  T+FY + + G L LPS++   D+Y++       HGL  YEISN + 
Sbjct: 182 LPHYSSYSLIIEPKTIFYNLLRKGKLRLPSQDAEADMYSMLMDEMEKHGLKQYEISNFAT 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YW   +Y G G GAH   K        +++K    ++ M+R     V+E 
Sbjct: 242 PGYESRHNLVYWNNEEYFGFGAGAHGYEKGVRLSNYGALKK----YIGMLRDGCLPVMET 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
              + +++ +E + +GLR  EG+  + +    G ++        + +  +G +E  +   
Sbjct: 298 HTETKKEKMEEEMFLGLRKNEGVRFRHFREKFGVDMKEVFAGAIKEMTERGLLEE-KGGS 356

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T+ G  + + V     +
Sbjct: 357 LRLTREGRFLGNEVFEAFLL 376


>gi|84496862|ref|ZP_00995716.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Janibacter sp. HTCC2649]
 gi|84383630|gb|EAP99511.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Janibacter sp. HTCC2649]
          Length = 424

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 117/396 (29%), Positives = 192/396 (48%), Gaps = 18/396 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQ 64
              +   G    G+Y+H PFC  +C YCDFN++         +   FI + L E+   + 
Sbjct: 18  ATALQTLGKRPFGIYLHVPFCRVRCGYCDFNTYTLTELGPGASTSTFIDTTLAELDLAQA 77

Query: 65  LTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           + G     + +IF GGGTP+++   ++   +DGI   + ++ +VE+T EANP SV  ++ 
Sbjct: 78  VLGDSAPRVDTIFVGGGTPTMLAAADLVKAVDGIRDRFGLADDVEVTTEANPDSVTPDSL 137

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +     G  RISLG+QS     L  L R H+ +    A+  A++     S DLIY  P +
Sbjct: 138 RELADGGFTRISLGMQSAVPHVLATLDRTHDPAGVEKAVRAAQDAGMVTSVDLIYGTPGE 197

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++  W   L +A+S   +H+S Y L +E+GT      + G++  P ++     Y +   +
Sbjct: 198 SVDDWRRSLDQAISLESEHVSAYALVVEEGTKLAAQVRRGEVARPDDDDEATKYEIADEV 257

Query: 243 TSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            SA G   YE+SN +        HN  YW  GD+ G+GPGAHS V      V     KHP
Sbjct: 258 LSAAGFGWYEVSNWTRTPAGRCRHNDGYWTGGDWWGVGPGAHSHVGG----VRWWNVKHP 313

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            ++   +         +E L++EQ  DE +++ +R+R+G+ V D       ++       
Sbjct: 314 RAYAGRLTDGLSPGAGRETLTAEQVRDEQVLLQVRVRDGLVVDD-----LDDIGRRAVAG 368

Query: 362 LQRQGFIE---RVQFSRLRCTQRGMTMLDSVIANLA 394
           L   G ++    V+  R+  T RG  + D+V+  L 
Sbjct: 369 LVADGLVDGTAAVRDRRVVLTLRGRLLADTVVRRLL 404


>gi|256375378|ref|YP_003099038.1| coproporphyrinogen III oxidase [Actinosynnema mirum DSM 43827]
 gi|255919681|gb|ACU35192.1| oxygen-independent coproporphyrinogen III oxidase [Actinosynnema
           mirum DSM 43827]
          Length = 404

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 118/394 (29%), Positives = 187/394 (47%), Gaps = 17/394 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQ 64
              + G G+   GVYVH PFC  +C YCDFN++           E++++    E+    +
Sbjct: 19  ATALEGLGTRPFGVYVHVPFCATRCGYCDFNTYTAGELGTSASPESWLEGLRRELDLAAR 78

Query: 65  LTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           + G P +  ++F GGGTPSL+    +A +L+ +  +  ++   E+T E+NP S     F 
Sbjct: 79  VLGSPPAAETVFVGGGTPSLLGADGLAAVLEAVRSSVGLAPGAEVTTESNPESTSSEFFA 138

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQ 182
             R+AG  R+SLG+QS     L+ L R H     A AA       F  ++ DLIY  P +
Sbjct: 139 AIREAGYTRVSLGMQSAARHVLQILDRKHTPGRAAAAAREAREGGFEHVNLDLIYGTPGE 198

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                   L       VDHLS Y L +E+GT   +  + G+L  P ++V  + Y +  + 
Sbjct: 199 RDEDLRESLAVVRDAGVDHLSAYALIVEEGTALARRVRRGELPAPDDDVLAERYEMVDAA 258

Query: 243 TSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
               G+  YE+SN +        HN+ YW+  D+ G GPGAHS V      V     KHP
Sbjct: 259 AREMGMSWYEVSNWAASEEGRCRHNVLYWQGADWWGAGPGAHSHVGG----VRWWNVKHP 314

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +  ++   G     +E L+ + +  E +++ LRL EG+ V+  +    R         
Sbjct: 315 AKYAAVLAGGGSPAAGREVLAEDDRRVERVLLELRLSEGLPVEVLDRDGRRE-----AAR 369

Query: 362 LQRQGFIERVQFSRLR--CTQRGMTMLDSVIANL 393
           +  +G +E +  +R R   T RG  + D+V+  L
Sbjct: 370 VAAEGLLEPMALARGRCVLTDRGRLLADAVVRRL 403


>gi|294647163|ref|ZP_06724762.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CC 2a]
 gi|294809226|ref|ZP_06767942.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides xylanisolvens SD CC 1b]
 gi|292637450|gb|EFF55869.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CC 2a]
 gi|294443620|gb|EFG12371.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 376

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 119/379 (31%), Positives = 197/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTRYVQTLCRELAMRKEYLKGEDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I K++ ++   EIT+EANP  +             NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIRKHYGLNHCQEITLEANPDDLSQEYLGMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEY-NGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|167644145|ref|YP_001681808.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
 gi|167346575|gb|ABZ69310.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
          Length = 387

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 154/381 (40%), Positives = 236/381 (61%), Gaps = 5/381 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ-SFLTEMQWMRQLTGPRSISSI 74
              LGVYVHWP+C + CPYCDFN    R +  ++  +  + + +++  R LTGPR++ SI
Sbjct: 9   PPPLGVYVHWPYCARICPYCDFNVVRDRGRTDEQAALANAIVADLRAQRDLTGPRTLLSI 68

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL++P  +A +++     W+  +++EI++EANP+  E + F     AGV R+S
Sbjct: 69  FFGGGTPSLMDPGEVARVIETAKALWSPVADLEISLEANPTDAEADRFAALASAGVARLS 128

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ+L++ +L  LGRNH+A  A  A+ +A   FPR+S DLIYA P QT+  W+ EL   
Sbjct: 129 LGVQALDDAALALLGRNHDAGSARRAMAVAAKAFPRLSADLIYARPGQTVEAWKAELSAL 188

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+Y  +H+S YQLTIE GT F +    G LV+P E++A  L+  TQ++  A G  AYE+S
Sbjct: 189 LAYGPEHVSPYQLTIEHGTAFDRAVGRGKLVVPDEDLAAALFETTQAVLEAAGFDAYEVS 248

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           NH+    A S HNL YWR  DY+G+GPGAH R+ +   ++A +  +    +++ V + G 
Sbjct: 249 NHARGEAARSRHNLVYWRGHDYVGVGPGAHGRLSLTEGKLATTAHRKIVDYVRAVAETGV 308

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
              E+E L++ + A+E L++GLR+ +G+S  +  +L G + D    ++L     +     
Sbjct: 309 G-FERETLTATEAAEERLLLGLRIDDGVSFAEIAVL-GLSPDTPKVKSLVEARLLV-DDP 365

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +RLR T+ G  +LD +   LA
Sbjct: 366 ARLRATRSGRLVLDRLTGTLA 386


>gi|71903409|ref|YP_280212.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS6180]
 gi|71802504|gb|AAX71857.1| coproporphyrinogen oxidase [Streptococcus pyogenes MGAS6180]
          Length = 408

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 34  SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 89  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 149 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAK 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 209 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 269 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 323

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 324 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVK 383

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 384 -DDAFVRMTKKGLFLGDSVAERFIL 407


>gi|257068889|ref|YP_003155144.1| coproporphyrinogen III oxidase, anaerobic [Brachybacterium faecium
           DSM 4810]
 gi|256559707|gb|ACU85554.1| coproporphyrinogen III oxidase, anaerobic [Brachybacterium faecium
           DSM 4810]
          Length = 389

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 126/397 (31%), Positives = 189/397 (47%), Gaps = 22/397 (5%)

Query: 11  MTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQW---- 61
           MT   +    L VY+H PFC  +C YCDFN++      G   Q  +  + + EM      
Sbjct: 1   MTPAPTRGGDLSVYIHVPFCAVRCGYCDFNTYTATELGGGGSQAEYPANAMAEMDLTLAA 60

Query: 62  -MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                     IS++FFGGGTP+L+    +  +LD +     ++ + EIT EANP SV   
Sbjct: 61  DRAAGYEYEQISTVFFGGGTPTLLPADELVAMLDHLRTLIPLAPDAEITTEANPDSVTRA 120

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +       GV R+S+G+QS     L  L R H+  +   A+  AR     +S DLIY  P
Sbjct: 121 SLSRLADGGVTRVSIGMQSAVPSVLATLDRTHDPEKVPQAVQWAREAGLDVSLDLIYGTP 180

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T+   E  ++ ALS  VDH+S Y L IE  T   +  + G+L  P  +   D Y L  
Sbjct: 181 GETLADVETSVRSALSCGVDHMSAYSLIIEGNTAMARQLRRGELQEPDPDDMADKYELVD 240

Query: 241 SITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            +  A GL  YE+SN +   A+ S HNL YWR  D+ GIGPGAH         +     K
Sbjct: 241 DLARADGLSWYEVSNFARTPAQRSRHNLAYWRGTDWWGIGPGAHRH----RDGLRAWNVK 296

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP  + +M+      V + E +++E +  E +M+ LR+ +G+ V          L +  +
Sbjct: 297 HPSRYARMLAAGEMPVADSEHVAAEDRLTERIMLELRIVDGLPVDVVPEARRPMLAVHRD 356

Query: 360 RNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
           R     G ++   +   R   T+ G  + D+VI +L 
Sbjct: 357 R-----GHLDAAALADGRAVLTRSGRLLADAVIRDLV 388


>gi|148272742|ref|YP_001222303.1| coproporphyrinogen III oxidase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830672|emb|CAN01608.1| oxygen-independent coproporphyrinogen III oxidase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 407

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 115/391 (29%), Positives = 188/391 (48%), Gaps = 18/391 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGP-- 68
           G  + + GVY+H PFC  +C YCDFN++       V Q ++    + E+++         
Sbjct: 24  GADARAFGVYLHVPFCRVRCGYCDFNTYTAPELRGVRQSDYASQAVQEVRFAGSSLRDSG 83

Query: 69  ---RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              RS S++F GGGTP+L+  +++  +LD + + + ++   E+T EANP SV+       
Sbjct: 84  IPARSASTVFLGGGTPTLLPVEDLVRMLDAVRETFGLAEGAEVTTEANPDSVDDAYLAAL 143

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G  R+S G+QS   + L  L R H+ +     +  AR     +S DLIY  P +T+ 
Sbjct: 144 AAGGFTRVSFGMQSAVPRVLATLERTHDPARIAPVVRGARAAGLEVSLDLIYGTPGETID 203

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   L++A++   DHLS Y L +E GT   +  +  ++  P E++  D+Y L   +   
Sbjct: 204 DWRASLEQAIAQEPDHLSAYALIVEPGTKLARQIRRDEVPEPDEDLQADMYELADRMLGE 263

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SN +  G  S HNL YW+  D+ G+GPGAHS V      V     KHP ++ 
Sbjct: 264 AGYEWYEVSNWARDGRRSRHNLAYWQGHDWWGVGPGAHSHVGG----VRWWNVKHPAAYA 319

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             V         +E L    +  E +++G R+R+G+++        R +       L   
Sbjct: 320 DRVLAGASPGAGRESLDDATREVERVLLGARIRDGLAIPTLTAEGRRQV-----AGLIAD 374

Query: 366 GFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
           G ++        L  T +G  + D+V+  L 
Sbjct: 375 GLVDPRAALSGTLVLTLQGRLLADAVVRRLL 405


>gi|225868346|ref|YP_002744294.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           equi subsp. zooepidemicus]
 gi|225701622|emb|CAW98890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus equi subsp. zooepidemicus]
          Length = 376

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 202/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +         S+ ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLEALIKEFESY----QINSLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L  + ++  +    E TIEANP  +  +     R++ VNRIS
Sbjct: 57  YIGGGTPTAITAKQLDYLLSHLQQHLQLDQLEEFTIEANPGDLTEDKIAVLRQSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  ++ L+ +GR+H  ++    I  L    F  MS DLIYALP QTM Q +  + +
Sbjct: 117 LGVQTFNDKQLKQIGRSHTEAQIYTTIASLKEAGFQNMSIDLIYALPGQTMQQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMEASGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    +R  + I    + +LK V  +G+
Sbjct: 237 SNFTKPGFESRHNLMYWNNDEYFGCGAGASGYLNGIRYRNRVPI----QHYLKAV-ADGN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L+ E+  +E L +GLR + G+SV  ++   G + +       R LQ QG + +
Sbjct: 292 ARLSEEVLTKEEMMEEELFLGLRKKSGVSVSRFQEKFGLSFESRYGPVVRELQNQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                +R T++G+ + DSV     +
Sbjct: 352 -DKDFVRMTKKGLFLGDSVAEKFIL 375


>gi|295084743|emb|CBK66266.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides
           xylanisolvens XB1A]
          Length = 376

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 198/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++Q+   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTRYVQALCRELTMRKEYLKGEDIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   I D I +++ ++   EIT+EANP  +     +       NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQEYLEMLSSLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA  AI AI   R   F  +S DLIY LP +T  +WE +L++A+S  
Sbjct: 121 FDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGLPGETKERWENDLRQAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+ T  Y M K   +    E+ +++ + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLLIEHLQKAGFEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS   +       SI    ++++K + ++  A  E 
Sbjct: 241 PGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI----DTYIKGIEEDCRA-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E+L    + +EF++  +R   G  ++  + + G  +   C++      + G +E      
Sbjct: 296 EYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQKMAAPYLKNGKLEEY-NGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|60683089|ref|YP_213233.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
 gi|60494523|emb|CAH09320.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
          Length = 377

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G   +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKG--RYIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLREAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C +  +     G +E  + + 
Sbjct: 296 EERDLTTRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLEIYEGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|301164603|emb|CBW24162.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 638R]
          Length = 377

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G   +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKG--RYIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRIYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLREAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C +  +     G +E  + + 
Sbjct: 296 EERDLATRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLEIYEGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|256831111|ref|YP_003159839.1| oxygen-independent coproporphyrinogen III oxidase [Desulfomicrobium
           baculatum DSM 4028]
 gi|256580287|gb|ACU91423.1| oxygen-independent coproporphyrinogen III oxidase [Desulfomicrobium
           baculatum DSM 4028]
          Length = 384

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 128/375 (34%), Positives = 199/375 (53%), Gaps = 11/375 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH PFCV+KC YC F+S     +     ++Q  L E+    ++ G   + S++FGGGT
Sbjct: 3   LYVHVPFCVRKCGYCAFHSGPFSREAA-ALYMQHVLRELADWGKVLGRVPVESVYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQS 139
           PSL+EP  I  +L+     +T+S++ EIT+EANP SV         R  GVNR+SLGVQS
Sbjct: 62  PSLLEPGQIGALLEAAGTCFTLSADAEITLEANPDSVLRPGFLDSVRGLGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  L  LGR H++ +A  A+  AR   F  +S DLI+ LP QT  +W  +L  A+  +
Sbjct: 122 LQDDLLAMLGRPHDSRQARLAVQAARAAGFSNLSLDLIWGLPGQTHERWMNDLAAAVELS 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L++E GT   +  ++G L LP E     +Y        + G   YEISN++ 
Sbjct: 182 PEHLSCYGLSLEDGTALTRKVEEGALTLPDEETGALMYMDGSEFLESSGYAHYEISNYAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y+G+GP A S ++        ++ ++       V   G    E 
Sbjct: 242 PGRESRHNRGYWAGLEYLGLGPAAVSTIQDRRWSNPTALGEY-----AAVVAEGKERNET 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRL 376
           E L++  +  E +M+ LR   G+ ++ ++   G            L+  G + R++   L
Sbjct: 297 EVLTARTRLQEMVMLTLRTGAGLDLEKFKATTGTEFPWRHPAVEQLRSSGLV-RLRAGHL 355

Query: 377 RCTQRGMTMLDSVIA 391
           + T++GM + +SVI 
Sbjct: 356 QLTRKGMLVSNSVIE 370


>gi|170757805|ref|YP_001782595.1| coproporphyrinogen III oxidase [Clostridium botulinum B1 str. Okra]
 gi|169123017|gb|ACA46853.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B1 str. Okra]
          Length = 380

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 200/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 KVVGLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ ++++++  +
Sbjct: 356 EKEN-RIYLSKEAVSISNTILSDFLL 380


>gi|308177470|ref|YP_003916876.1| coproporphyrinogen oxidase [Arthrobacter arilaitensis Re117]
 gi|307744933|emb|CBT75905.1| coproporphyrinogen oxidase [Arthrobacter arilaitensis Re117]
          Length = 409

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 118/392 (30%), Positives = 180/392 (45%), Gaps = 20/392 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT---- 66
               ++  YVH PFC  +C YCDFN++          Q  +  +   E+ + R++     
Sbjct: 25  AAGRTMSFYVHIPFCTVRCGYCDFNTYTATEPGSGSSQATYAATVSKEISFAREVMDRSG 84

Query: 67  -GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R I ++FFGGGTP+L+   ++  +L  I + + +    EIT EANP SV   + Q  
Sbjct: 85  QPHREIETVFFGGGTPTLLPASDLVSVLGQIREEFGLKPGAEITTEANPDSVTRESLQEL 144

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G  R+S G+QS     L+ L R H+      A+  AR     +S DLIY  P +++ 
Sbjct: 145 ADGGFTRVSFGMQSAVPHVLKVLERTHDPKRVPQAVAWAREAGLDVSVDLIYGTPGESLE 204

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   ++ ALSY  DH+S Y L IE+GT      + G +    ++   + Y L   + +A
Sbjct: 205 DWRTSIEAALSYEPDHISAYALIIEEGTKLAAQIRRGQVPNIDDDDHAEKYQLADEMFAA 264

Query: 246 HGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            G   YE+SN S   A    HN+ YW+ GD+ G GPGAHS V      +     KHP ++
Sbjct: 265 AGFSWYEVSNWSKKPANACQHNIAYWKGGDWWGAGPGAHSHVGG----LRWWNVKHPAAY 320

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
            + +         +E+  ++    E  M+  RL  G+ + + E   GR    +    L  
Sbjct: 321 QQRIDAGISPGHGREYPDAQAVQLERTMLLTRLSSGMQISELEE-TGR----KKVAGLIA 375

Query: 365 QGFIERVQ--FSRLRCTQRGMTMLDSVIANLA 394
              IE        L  TQRG  + D V+  L 
Sbjct: 376 DELIEPKAAFAGTLVLTQRGRLLADLVVRELL 407


>gi|313813065|gb|EFS50779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL025PA1]
 gi|327330771|gb|EGE72517.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL097PA1]
          Length = 407

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 121/392 (30%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDFN++V           ++ +   E++      G     
Sbjct: 28  ADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHQELELAADALGDAQPP 87

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D +   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 88  VSTIFFGGGTPTMLSPVQLGELIDHVRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 147

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 148 NRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRH 207

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 208 SLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 267

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 268 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 323

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 324 NVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 376

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 377 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 407


>gi|53715153|ref|YP_101145.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
 gi|52218018|dbj|BAD50611.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
          Length = 377

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G   +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKG--RYIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLREAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFEQ 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C +  +     G +E  + + 
Sbjct: 296 EERDLTTRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLEIYEGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|322418113|ref|YP_004197336.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M18]
 gi|320124500|gb|ADW12060.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M18]
          Length = 381

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 195/380 (51%), Gaps = 7/380 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGG 78
           G+Y+H+PFC+KKC YCDFNS         E +++  L EM+   + L  P    +++ GG
Sbjct: 4   GLYIHFPFCLKKCLYCDFNSTAWSGDEPAE-YVELLLREMELREKALPEPVQAPTLYLGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ +  +++   + + +  + E+T+EANP ++      GYR AGVNR+SLG+Q
Sbjct: 63  GTPSLMAPELVGRLIEQAVQRFGLKPDAEVTLEANPGTLTPERLSGYRAAGVNRLSLGIQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S EE+ L+ LGR H   EA+ A   AR   F  +S DL+++LP Q++ QW   L++ ++ 
Sbjct: 123 SFEERLLQRLGRVHTVHEAVGAFEQARAAGFDNISIDLMHSLPGQSLKQWRAALRKGIAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L++E+GT F ++++ G+L LP E     ++  T    +A G   YEISN +
Sbjct: 183 GPEHISAYALSVEEGTPFERLYERGELPLPGEEEGARMFEATSECLAAAGYLHYEISNFA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HNL+YW    Y+G G GAHS           +       + + +        E
Sbjct: 243 RPGRFSRHNLSYWSRQSYLGFGAGAHSFWNPDGLGRRWNNAADLPGYRESIALGTLPERE 302

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFS 374
              L+ E    E   +GLR+  G+ +   +   G             L R G +      
Sbjct: 303 PVQLTLEDAVAESFFLGLRVLTGLDLAPLKAAFGEAPLSRRLAEVDELLRSGLLV-ADGD 361

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+R  +  + + +S+ +   
Sbjct: 362 RIRLAENSVIIANSIFSRFL 381


>gi|310287389|ref|YP_003938647.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           bifidum S17]
 gi|309251325|gb|ADO53073.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           bifidum S17]
          Length = 464

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 121/419 (28%), Positives = 187/419 (44%), Gaps = 45/419 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           +Y+H PFC+++C YCDFN++          + N+    + EM+ +R            +S
Sbjct: 41  IYIHVPFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEPPVS 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + G  R
Sbjct: 101 TVFFGGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGFTR 160

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   ++
Sbjct: 161 VSFGMQSAVPHVLKTLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVR 220

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  YE
Sbjct: 221 TAVDLGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYE 280

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-----------------------VG 289
           ISN S  G ES HNL YWR  D+ G+GPGAHS                          V 
Sbjct: 281 ISNWSRPGYESRHNLGYWRNVDWAGLGPGAHSHYNTVMGSSTDGDAANSDAAGDVSTSVT 340

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV------ 343
           S  +      HP  W   +          E +S  +  +E +M+GLR+REG+ +      
Sbjct: 341 STSMRGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRH 400

Query: 344 -------KDWEMLAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSVIANLA 394
                  +D      R +D  C   L   G I           T+RG  + D+VI  + 
Sbjct: 401 IEAVNRAQDAAQGTLRIIDDACLTPLIGDGLITLDPTTGHAVATRRGRLLNDAVIERMF 459


>gi|224282947|ref|ZP_03646269.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium bifidum NCIMB 41171]
          Length = 469

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/419 (29%), Positives = 188/419 (44%), Gaps = 45/419 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           +Y+H PFC+++C YCDFN++          + N+    + EM+ +R            +S
Sbjct: 46  IYIHVPFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEPPVS 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + GV R
Sbjct: 106 TVFFGGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGVTR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   ++
Sbjct: 166 VSFGMQSAVPHVLKTLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVR 225

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  YE
Sbjct: 226 TAVDLGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYE 285

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-----------------------VG 289
           ISN S  G ES HNL YWR  D+ G+GPGAHS                          V 
Sbjct: 286 ISNWSRPGYESRHNLGYWRNVDWAGLGPGAHSHYNMVMGSSTDGDAANSDAAGDVSASVT 345

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV------ 343
           S  +      HP  W   +          E +S  +  +E +M+GLR+REG+ +      
Sbjct: 346 STSMRGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRH 405

Query: 344 -------KDWEMLAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSVIANLA 394
                  +D      R +D  C   L   G I           T+RG  + D+VI  + 
Sbjct: 406 IEAVNRAQDAAQGTLRIIDDACLTPLVGDGLITLDPTTGHAVATRRGRLLNDAVIERMF 464


>gi|313837301|gb|EFS75015.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL037PA2]
 gi|314928025|gb|EFS91856.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL044PA1]
 gi|314971797|gb|EFT15895.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL037PA3]
          Length = 398

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/390 (31%), Positives = 192/390 (49%), Gaps = 19/390 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTG--PRS 70
                 +Y+H PFCV +C YCDFN++V      V    ++++   E++    + G     
Sbjct: 19  ADGPWSIYLHVPFCVSRCGYCDFNTYVLSAMGNVAVAGYLKAVHRELELAADVLGAGQPP 78

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W    N EIT EANP ++      G  KAG+
Sbjct: 79  VSTIFFGGGTPTMLSPVQLGELVDHIRTLWGTDLNAEITTEANPETLSGEVLAGLLKAGI 138

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +++  W  
Sbjct: 139 NRLSMGMQSADEFVLTVLDRRHRPGRAVEMAQLARQMGFDDVSLDLIFGAPGESLDSWWH 198

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  AL+   DH+S Y L IE+GT      + G+L +  E+   D Y L + I +  G  
Sbjct: 199 SLDVALTAEPDHISAYSLIIEEGTRLAGRIRRGELPMTDEDDLADKYLLAERILTEAGYV 258

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ G+GPGAHS +            KHP ++ 
Sbjct: 259 NYEVSNWARPRNGRDHRCRHNMAYWLGHDWWGVGPGAHSHIAGTR----WWNVKHPATYR 314

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
            ++R+    V   E L   Q+ +E +++ LRL +G+ + D        ++      +  Q
Sbjct: 315 SLLRERKLPVDGYEVLDDVQRHEETVLLRLRLSDGLPMTDLPR-----VERMRAAKVVEQ 369

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G    ++  RL     G  + D +IA+L +
Sbjct: 370 GL-GTIEEGRLVLNLSGRMVADRIIADLLI 398


>gi|119503512|ref|ZP_01625595.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
 gi|119460574|gb|EAW41666.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
          Length = 384

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 207/385 (53%), Gaps = 10/385 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
                 L +YVH P+C +KCPYCDFNSH +     +  +I + LT+++      G R + 
Sbjct: 2   NASDIPLALYVHLPWCERKCPYCDFNSHEQFDSSLETGYIDALLTDLRQQLVSVGSRPLF 61

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+F GGGTPSL    +IA +L+GI + W++    EIT+EANP S E + F  YR AGVNR
Sbjct: 62  SVFLGGGTPSLFSGASIARLLNGIDQIWSIGLTTEITMEANPGSAEASRFADYRSAGVNR 121

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLG+QS  +  L  LGR H++++A+ AIHLA+  F R + D+++ LP Q +     +L+
Sbjct: 122 LSLGIQSFADAQLMALGRVHDSAQAMQAIHLAKQHFDRFNLDIMHGLPGQKIETALDDLE 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RA+ ++  H+S YQLTIE  T F+         LP++++  D+ +  ++     GL  YE
Sbjct: 182 RAIDHSQGHVSWYQLTIEPNTTFWSRPP----RLPNDDILTDIQDAGEARFLESGLTQYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VAISIEKHPESWLKMVRKN 311
           +S  +     S HNLNYW +GDYIGIG GAH ++   +   +     + P  +L  + + 
Sbjct: 238 VSAWASHQQMSQHNLNYWTFGDYIGIGAGAHGKITKENGSIIRTRRSRSPRDYLTGIAEG 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
                 ++ L   +   EF++  LRL+ G+    ++   G  L +       L   G + 
Sbjct: 298 VPP--HQQQLPQTELPVEFMLNALRLKNGVPASLFKANTGLELAVVEPQIEKLVANGLLS 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
                R+  T  G   L+ V+A+  
Sbjct: 356 -ADTERIGTTDHGYRFLNDVVASFM 379


>gi|289425089|ref|ZP_06426866.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK187]
 gi|289427162|ref|ZP_06428878.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J165]
 gi|289154067|gb|EFD02755.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK187]
 gi|289159631|gb|EFD07819.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J165]
          Length = 393

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/392 (31%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDFN++V           ++ +   E++      G     
Sbjct: 14  ADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHQELELAADALGDAQPP 73

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 74  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 133

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 134 NRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRH 193

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 194 SLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 253

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 254 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 310 NVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 362

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 363 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 393


>gi|71910578|ref|YP_282128.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS5005]
 gi|71853360|gb|AAZ51383.1| coproporphyrinogen oxidase [Streptococcus pyogenes MGAS5005]
          Length = 398

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 24  SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 79  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 139 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAK 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 199 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 259 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 314 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVK 373

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 374 -DDAFVRMTKKGLFLGDSVAERFIL 397


>gi|168181648|ref|ZP_02616312.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum Bf]
 gi|237796415|ref|YP_002863967.1| coproporphyrinogen III oxidase [Clostridium botulinum Ba4 str. 657]
 gi|182675087|gb|EDT87048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum Bf]
 gi|229261506|gb|ACQ52539.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum Ba4 str. 657]
          Length = 380

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 200/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VDNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKHTLKTIDKKENIEFTVEGNPGTFTEKKLKMLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKDTLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 TVVDLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLRERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNRRYENTSSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D+++  G+N   +        ++   + 
Sbjct: 296 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQVRFGKNIIYIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ ++++++  +
Sbjct: 356 EKEN-RIYLSKEAVSISNTILSDFLL 380


>gi|153813171|ref|ZP_01965839.1| hypothetical protein RUMOBE_03587 [Ruminococcus obeum ATCC 29174]
 gi|149830702|gb|EDM85793.1| hypothetical protein RUMOBE_03587 [Ruminococcus obeum ATCC 29174]
          Length = 381

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 131/389 (33%), Positives = 211/389 (54%), Gaps = 15/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M  +    L +Y+H PFCV+KC YCDF S     +  ++ +I++   E+Q + Q      
Sbjct: 1   MKNKNRIPLELYIHIPFCVQKCQYCDFLSGPSDQET-RDRYIKALRAEIQAV-QGVEAYE 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I S+F GGGTPS+++ + IA I++ I K +  S + EITIE+NP +V++     YR+ G+
Sbjct: 59  IVSVFIGGGTPSVLKAEAIASIMETIQKKFCFSPDAEITIESNPGTVDLAKLNAYRETGI 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLG+QS + + LR LGR H   E + +   AR   F  ++ DL++A+P QT   W  
Sbjct: 119 NRLSLGLQSTDSKELRMLGRIHTYEEFLQSYQWAREAGFQNINIDLMFAIPGQTGEAWRA 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++      +H+S Y L IE+GT F +     +L LP E+    +Y  T  I + +G  
Sbjct: 179 HLRQVAELKPEHISAYSLIIEEGTPFAE----CELDLPDEDTEYQMYEDTAGILAEYGYQ 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G    HN+ YW+  +Y+G+G GA S           S  +  + +L    
Sbjct: 235 QYEISNYAKDGYACRHNIGYWKRTEYLGLGLGASSLYGE----NRFSNTRDMQEYLGFSG 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
                  +   LS + Q +EF+ +GLR+ EGIS  D+E   G+ L+      LQ+    G
Sbjct: 291 NTERIRKDVLKLSLKDQIEEFMYLGLRMTEGISEIDFEQNFGQKLENIYGSVLQKYKETG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           F+E+   +  R T++G+ + + ++A L +
Sbjct: 351 FLEKT-GTNWRFTRKGIHVSNHILAELLL 378


>gi|153941159|ref|YP_001392239.1| coproporphyrinogen III oxidase [Clostridium botulinum F str.
           Langeland]
 gi|152937055|gb|ABS42553.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum F str. Langeland]
 gi|295320237|gb|ADG00615.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum F str. 230613]
          Length = 380

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 200/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNSLKTIDKKENIEFTVEGNPGTFTGKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  + + +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFVHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 KVVDLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ ++++++  +
Sbjct: 356 EKEN-RIYLSKEAVSISNTILSDFLL 380


>gi|265766983|ref|ZP_06094812.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
 gi|263253360|gb|EEZ24836.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
          Length = 377

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G   +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKG--RYIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRIYGMENCHEITLEANPDDLCPEYLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLCEAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C +  +     G +E  + + 
Sbjct: 296 EERDLATRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLEIYEGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|255011282|ref|ZP_05283408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 3_1_12]
 gi|313149093|ref|ZP_07811286.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313137860|gb|EFR55220.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
          Length = 377

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 121/379 (31%), Positives = 198/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R  + G   +I++   E++          I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSERKGH--YIEALCKELEMRYTYLKGEPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEEDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEYVQMLSRLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L  L R HNA++AI A+ L R   F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDATLTLLKRRHNATQAIRAVELCRTYGFRNISIDLIYGLPGETAERWERDLQQAVALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  Y+M +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHVSAYHLIYEEGTPIYRMLQKHQVEEVDEDSSVRFFTLLMDRLQEAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGTSYLGCGPSAHSFDGATREWNCSSIEKYIAGI-----ESGKRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C +  +     G +E +    
Sbjct: 296 EERDLTTRYNEFVITSVRTQWGISLERLRNDYGTELEQYCLKMARPSLENGKLE-IHEGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|256396170|ref|YP_003117734.1| coproporphyrinogen III oxidase [Catenulispora acidiphila DSM 44928]
 gi|256362396|gb|ACU75893.1| oxygen-independent coproporphyrinogen III oxidase [Catenulispora
           acidiphila DSM 44928]
          Length = 408

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 112/386 (29%), Positives = 176/386 (45%), Gaps = 16/386 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPR--SI 71
             L  Y+H P+C  +C YCDFN++      G   Q  +  + + E++  R + G     +
Sbjct: 30  TPLAFYIHVPYCASRCGYCDFNTYTASELGGGASQATYGATAIEEIRLARTVLGGADLPV 89

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTP+++  +++  +L  +   + ++ + E+T EANP SV        R  G  
Sbjct: 90  QTVFFGGGTPTMLPAKDLVALLGAVRDEFGLAPDAEVTTEANPESVNPAYLAELRAGGFT 149

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+QS  E  L+ L R H      A +  AR   F  ++ DLIY  P ++   W   
Sbjct: 150 RISFGMQSAREHVLQILDRRHTPGRPEACVREAREAGFEHVNLDLIYGTPGESDDDWRAS 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  A+  A DH+S Y L +E GT      K G+L +  ++V  D Y +     +A G   
Sbjct: 210 LDAAIGAAPDHVSAYSLIVEDGTRLAARVKRGELPMIDDDVHADRYLIADEKLAAAGYSW 269

Query: 251 YEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YE+SN  +     S HNL YW   ++ G+GPGAHS V            KHP ++ + V 
Sbjct: 270 YEVSNWAAAPQGRSRHNLLYWTGANWWGVGPGAHSHVGGTR----WWNVKHPSAYSQRVA 325

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-QGFI 368
                   +E L +E +  E +++ LRL  G  +        +         L   +   
Sbjct: 326 AGQSPAHAREVLDAEDRRVERILLELRLDSGCDIGILNPAGRKAAIGAAAAGLLDPRSLA 385

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E         T RG  + D+V+ +L 
Sbjct: 386 E----GSAVLTLRGRLLADAVVRDLV 407


>gi|15675037|ref|NP_269211.1| coproporphyrinogen III oxidase [Streptococcus pyogenes M1 GAS]
 gi|13622189|gb|AAK33932.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes M1
           GAS]
          Length = 376

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 57  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMSFEERYGNIVRELQNQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|313764581|gb|EFS35945.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL013PA1]
 gi|313792271|gb|EFS40372.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA1]
 gi|313801779|gb|EFS43013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA2]
 gi|313807390|gb|EFS45877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL087PA2]
 gi|313816121|gb|EFS53835.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL059PA1]
 gi|313818438|gb|EFS56152.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL046PA2]
 gi|313820200|gb|EFS57914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL036PA1]
 gi|313822991|gb|EFS60705.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL036PA2]
 gi|313825080|gb|EFS62794.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL063PA1]
 gi|313827980|gb|EFS65694.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL063PA2]
 gi|313838608|gb|EFS76322.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL086PA1]
 gi|314915577|gb|EFS79408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA4]
 gi|314918469|gb|EFS82300.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA1]
 gi|314919957|gb|EFS83788.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA3]
 gi|314925429|gb|EFS89260.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL036PA3]
 gi|314931970|gb|EFS95801.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL067PA1]
 gi|314955839|gb|EFT00239.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL027PA1]
 gi|314958319|gb|EFT02422.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL002PA1]
 gi|314960126|gb|EFT04228.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL002PA2]
 gi|314962932|gb|EFT07032.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL082PA1]
 gi|314967994|gb|EFT12093.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL037PA1]
 gi|314978332|gb|EFT22426.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL072PA2]
 gi|314987776|gb|EFT31867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA2]
 gi|314990055|gb|EFT34146.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA3]
 gi|315078146|gb|EFT50197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL053PA2]
 gi|315084441|gb|EFT56417.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL027PA2]
 gi|315085781|gb|EFT57757.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL002PA3]
 gi|315088801|gb|EFT60777.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL072PA1]
 gi|315098410|gb|EFT70386.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL059PA2]
 gi|315101233|gb|EFT73209.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL046PA1]
 gi|315108457|gb|EFT80433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL030PA2]
 gi|327332063|gb|EGE73800.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL096PA3]
 gi|327443266|gb|EGE89920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL013PA2]
 gi|327450906|gb|EGE97560.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL087PA3]
 gi|327453015|gb|EGE99669.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL092PA1]
 gi|327453745|gb|EGF00400.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL083PA2]
 gi|328753594|gb|EGF67210.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL020PA1]
 gi|328754328|gb|EGF67944.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL087PA1]
 gi|328754421|gb|EGF68037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL025PA2]
          Length = 397

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/392 (31%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDFN++V           ++ +   E++      G     
Sbjct: 18  ADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHQELELAADALGDAQPP 77

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 78  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 137

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 138 NRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRH 197

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 198 SLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 257

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 258 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 313

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 314 NVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 366

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 367 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 397


>gi|56807717|ref|ZP_00365588.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Streptococcus pyogenes M49 591]
 gi|209559352|ref|YP_002285824.1| coproporphyrinogen III oxidase [Streptococcus pyogenes NZ131]
 gi|209540553|gb|ACI61129.1| Coproporphyrinogen III oxidase, oxygen- independent [Streptococcus
           pyogenes NZ131]
          Length = 398

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 203/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 24  SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 79  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I   +   F  +S DLIYALP QT+ Q +  + +
Sbjct: 139 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAK 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 199 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 259 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 314 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEECYGNIVRELQNQGLLVK 373

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 374 -DDAFVRMTKKGLFLGDSVAERFIL 397


>gi|332675311|gb|AEE72127.1| putative oxygen-independent coproporphyrinogen-III oxidase
           [Propionibacterium acnes 266]
          Length = 407

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 122/392 (31%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDFN++V           ++ +   E++      G     
Sbjct: 28  ADGPWSIYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHQELELAADALGDAQPP 87

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 88  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 147

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 148 NRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRH 207

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 208 SLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 267

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 268 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 323

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 324 NVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 376

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 377 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 407


>gi|332799047|ref|YP_004460546.1| oxygen-independent coproporphyrinogen III oxidase
           [Tepidanaerobacter sp. Re1]
 gi|332696782|gb|AEE91239.1| oxygen-independent coproporphyrinogen III oxidase
           [Tepidanaerobacter sp. Re1]
          Length = 375

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 119/382 (31%), Positives = 212/382 (55%), Gaps = 13/382 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC+KKC YCDFNS      + +  ++ +   E+  +++     +  +IF 
Sbjct: 2   KTIGLYIHIPFCIKKCHYCDFNSFTTLELIPE--YLAALKKEILSLQKC--EYTAQTIFI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++  + +A IL  + ++  ++ + EITIEANP ++        +  GVNR+S+G
Sbjct: 58  GGGTPTILRCEQLADILRTLHESVYIAKDAEITIEANPGTLTREKLISLKSLGVNRLSIG 117

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ + Q L+ +GR H   +       ARN  F  ++ DLI+ LP Q +  ++  L++ L
Sbjct: 118 LQAYQNQLLKIMGRIHTVEDFEKNFETARNVGFDNINIDLIFGLPNQKVEDFDETLKKVL 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L++E+ T FY+  ++G L+LPSE+   ++Y     + +  G + YEISN
Sbjct: 178 HIFPEHISCYSLSVEEHTEFYRRQQEGTLLLPSEDDEREMYYRAIELLTNKGYNHYEISN 237

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G +S HN+ YW Y +Y+G+G GAHS +         SI    ++++K + +N +A+
Sbjct: 238 FAMPGRKSKHNIIYWTYREYLGLGAGAHSFLDNKRFYNYSSI----QAYIKSINENSNAI 293

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            + E +S+ +Q  EF  +GLRL +G+  K ++   G+       E    L+ Q  I+   
Sbjct: 294 ADMETISTLEQQAEFCFLGLRLLDGLDKKAFQKRFGKKFKQVYGEAVEKLKEQELIKE-N 352

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +++  T RG+   + V A   
Sbjct: 353 ANKISLTSRGLDFANVVFAEFL 374


>gi|139473833|ref|YP_001128549.1| coproporphyrinogen III oxidase [Streptococcus pyogenes str.
           Manfredo]
 gi|134272080|emb|CAM30321.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pyogenes str. Manfredo]
          Length = 376

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 203/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 57  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKITVLQRSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I   +   F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIARELQNQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|70726334|ref|YP_253248.1| coproporphyrinogen III oxidase [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447058|dbj|BAE04642.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           haemolyticus JCSC1435]
          Length = 373

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 191/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + +I + + EM      +  + + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-DKQPVDEYIAALIKEM----SFSKTKQLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I  N   S N E + EANP  + +N  +  ++ GVNRIS+GVQ+
Sbjct: 60  TPTALSEMQLERLLQAI--NSKFSINGEFSFEANPDELTLNKVKLLKQYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ LGR HN  +   A++ AR      +S DL+Y LP+QT+  +   L +A++  
Sbjct: 118 FKPELLKILGRTHNTQDIYNAVNNARKAGINSISLDLMYHLPEQTIDDFADSLNQAINMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  ++Y       +      YEISN + 
Sbjct: 178 IDHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMKTLNQTDFKQYEISNFAK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN  YW   +Y G G GA   V+   +     +      ++  +      V+  
Sbjct: 238 TNHESDHNKVYWFNEEYYGFGAGASGYVEGERYTNLNPV----RHYIDAINNGKRPVLTS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
              +  ++ +E + +GLR+ +G++ + +++  G+ LD        +L+ +  +     + 
Sbjct: 294 SCPTLNEKMEEEMFLGLRMNQGVNRERFKLKFGQTLDDIFGETIYDLKSKQLLIETDGN- 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|300813568|ref|ZP_07093899.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512316|gb|EFK39485.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 379

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 192/384 (50%), Gaps = 11/384 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             N + +Y+H PFC  +C YCDF S V   K   E +I+    E+   + +   R IS+I
Sbjct: 2   KKNKISIYIHIPFCRSRCHYCDFCSSVIDEKQ-VEKYIKYLKKEIHLYKDILEGREISTI 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS I+   I  IL+   KN+  S ++EITIEANP+S+ +   + YR   +NRIS
Sbjct: 61  FIGGGTPSSIDEIFIGQILEEF-KNFNFSKDIEITIEANPNSLSLEKLKKYRNFNINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS   + L+ +GR HN  E    +   +   F   + DL+ ALP QT+   E  ++ 
Sbjct: 120 IGAQSFNNKILKTIGRIHNKEEIFKTVEKIKEAGFINFNIDLMLALPYQTLKDIEESVEI 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +H+S Y L IE  T   K++     + PSEN+   +Y+         G + YEI
Sbjct: 180 LKILNPNHISYYSLIIEDNTNIKKLYDKNSSLFPSENMDRKMYHYLVDNLEKIGYNQYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +    E  HNL+YW   DY+G G  A S ++        S      S+ K + K   
Sbjct: 240 SNFAKKSFECKHNLSYWTLKDYLGFGLSASSNLRDKRFTNTCSFS----SYYKSLDKEKK 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
            +   E LS + + +EF +MG+RL  GI  K++E +   N     E+ +    + G IE 
Sbjct: 296 PIDFSEILSKKDRMNEFSIMGIRLNSGIDTKNFEEIFSTNFFKYYEKEIYKHIKDGLIE- 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           V+  ++  +++G  + + V  +  
Sbjct: 355 VKEDKICLSKKGRDLSNIVEVDFI 378


>gi|291548504|emb|CBL21612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus sp. SR1/5]
          Length = 378

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 126/389 (32%), Positives = 208/389 (53%), Gaps = 15/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M  +    L +Y+H PFCVKKC YCDF S     K  Q  + Q+   E+  +   +  R 
Sbjct: 1   MENEAKKPLELYIHIPFCVKKCDYCDFLSGPA-GKERQREYFQALEREIAAVPDFS-DRE 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I+++F GGGTPS+ +P  +  +LD I   + V+ + EITIEANP ++     Q Y + G+
Sbjct: 59  ITTVFIGGGTPSVPDPSLVGEMLDQIRNKFFVAPDAEITIEANPGTLYKEKLQIYLEHGI 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLG+QS + + L+ LGR H   E   +  +AR+  F  ++ DL+ A+P+QT   WE 
Sbjct: 119 NRLSLGLQSPQNRELKILGRIHTWEEFQESFFMARDAGFSNINIDLMSAIPEQTYADWEK 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + +H+S Y L IE+GT F +      L LP E+    +Y  T  I   +G H
Sbjct: 179 NLRTVAGLSPEHISAYSLIIEEGTPFGER----KLKLPDEDTEYRMYENTAGILEEYGFH 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G E  HN  YW+  DY+G+G GA S ++     +  S     + ++    
Sbjct: 235 QYEISNYAKGGRECRHNKGYWQRIDYLGLGLGASSLLE----HMRFSNTADMKEYIGNSA 290

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
                    E L+   +  EF+ +GLR+ EG+S++ +    G+N++      L++    G
Sbjct: 291 FPDKIRQNMESLTEADEMAEFMFLGLRMTEGVSMEAFAEYFGKNMENVYGEVLKKHLEIG 350

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +E+ +  R+  +++G+ + + V+A+  +
Sbjct: 351 MLEQ-KGDRIYLSRKGIHVSNGVMADFLL 378


>gi|253566285|ref|ZP_04843739.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
 gi|251945389|gb|EES85827.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
          Length = 377

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R    G   +I++   E++        + I +++FGGG
Sbjct: 3   GIYIHVPFCKTRCIYCDFYSTTRSEWKG--RYIEALCKELEMRYTYLKGKPIETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D + + + + +  EIT+EANP  +     Q   +   NRIS+G+Q+
Sbjct: 61  TPSQLDEKDFRKVFDTVRRVYGMENCHEITLEANPDDLCPEFLQMLSELPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HNA++AI A+ L R + F  +S DLIY LP +T  +WE +LQ+A++  
Sbjct: 121 FDDTTLKLLKRRHNAAQAIRAVELCRAHGFRNISIDLIYGLPGETTERWEKDLQQAIALD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  E+GT  YKM +   +    E+ +V  + L        G   YEISN   
Sbjct: 181 VEHISAYHLIYEEGTPIYKMLQKHQVEEVDEDSSVRFFTLLIDRLHEAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G GP AHS           SIEK+         ++G    E+
Sbjct: 241 PGMYSRHNTSYWQGVSYLGCGPSAHSFDGQTREWNCSSIEKYMSGI-----ESGQRDFER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E      + +EF++  +R + GIS++      G  L+  C +  +     G +E  + + 
Sbjct: 296 EERDLATRYNEFIITSVRTQWGISLERLSNDYGTQLEQYCLKMARPSLENGKLEIYEGA- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|225870719|ref|YP_002746666.1| oxygen-independent coproporphyrinogen III oxidase [Streptococcus
           equi subsp. equi 4047]
 gi|225700123|emb|CAW94238.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus equi subsp. equi 4047]
          Length = 376

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 200/385 (51%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +         S+ ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLEALIKEFESY----QISSLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I    +  +L  + ++  +    E TIEANP  +  +     R++ VNRIS
Sbjct: 57  YIGGGTPTAITANQLDYLLSHLQQHLQLDQLEEFTIEANPGDLTEDKIAVLRQSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  ++ L+ +GR+H  ++    I  L    F  MS DLIYALP QTM Q +  + +
Sbjct: 117 LGVQTFNDKQLKQIGRSHTEAQIYTTIASLKEAGFQNMSIDLIYALPGQTMQQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMEASGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    +R  + I    + +LK V  +G+
Sbjct: 237 SNFTKPGFESRHNLMYWNNDEYFGCGAGASGYLDGIRYRNRVPI----QHYLKAV-ADGN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L+ E+  +E L +GLR + G+SV  ++   G + +       R LQ QG +  
Sbjct: 292 ARLSEEVLTKEEMMEEELFLGLRKKSGVSVSRFQEKFGLSFESRYGPVVRELQNQGLLVE 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                +R T++G+ + DSV     +
Sbjct: 352 -DKDFIRMTKKGLFLGDSVAEKFIL 375


>gi|93005996|ref|YP_580433.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychrobacter cryohalolentis K5]
 gi|92393674|gb|ABE74949.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter
           cryohalolentis K5]
          Length = 441

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 138/417 (33%), Positives = 214/417 (51%), Gaps = 45/417 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            L +Y+H P+CVKKCPYCDFNSH   V       + ++ + L +    + LT  R ISSI
Sbjct: 30  PLALYIHIPWCVKKCPYCDFNSHELPVDSQLSMYDEYVDALLQDAAMQQVLTQGREISSI 89

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+       + DG+ K +  SS++EIT+EANP ++E   F  Y + G+NR+S
Sbjct: 90  FIGGGTPSLLPIAQYQRLFDGLRKYYQFSSDIEITMEANPGTLEHAPFAEYLEVGINRLS 149

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   + L  LGR HN ++A++AI  AR   F R++ DL++ LP+QTM++   ++Q 
Sbjct: 150 IGVQSFSAEQLTTLGRIHNPTQALSAIKAAREAGFERVNVDLMHGLPEQTMSEALDDIQM 209

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A      H+S YQLTIE  T+FY+       +LP+E+   D+    Q++    G   YE+
Sbjct: 210 AHDAGATHISWYQLTIEPNTVFYR----SQPILPNEDRLADIEESGQTLLQNLGYCNYEV 265

Query: 254 SNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVG----------------------- 289
           S  S  G     HN+NYW++GDY+ IG GAH +V +G                       
Sbjct: 266 SAWSGAGDKPCQHNVNYWQFGDYLAIGAGAHGKVTIGQDMIGQDIGNEMATDIWSIDSEN 325

Query: 290 --SHRVAISIEKHPESWLKMVRKN--------GHAVVEKEFLSSEQQADEFLMMGLRLRE 339
             S     S  + P+S+++    +           +V  + +  E+   EF++  LRL  
Sbjct: 326 TQSGIYRFSKSRMPKSYIEYEEAHVQDGASISAPKMVGWQAIDEEELVSEFMLNALRLHG 385

Query: 340 GISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++   +E   G + D    +   L  QG +      +L+ T+ G   L+ ++    
Sbjct: 386 GVAWSLFEARTGLSYDSIAIQVATLIEQGLL-IDHPEQLQPTELGKRYLNQILRAFL 441


>gi|28896092|ref|NP_802442.1| coproporphyrinogen III oxidase [Streptococcus pyogenes SSI-1]
 gi|28811342|dbj|BAC64275.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes
           SSI-1]
          Length = 398

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 24  SKKPTSAYVHVPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 79  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 139 LGVQTFNNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAK 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 199 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 259 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 313

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 314 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVK 373

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 374 -DDAFVRMTKKGLFLGDSVAERFIL 397


>gi|21910209|ref|NP_664477.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS315]
 gi|21904403|gb|AAM79280.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes
           MGAS315]
          Length = 408

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 34  SKKPTSAYVHVPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFDSY----GIRDLKTL 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 89  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 149 LGVQTFNNKQLKQIGRSHNEEQIYSTITNLKAAGFHNISIDLIYALPGQTLDQVKENVAK 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 209 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 269 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 323

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 324 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVK 383

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 384 -DDAFVRMTKKGLFLGDSVAERFIL 407


>gi|170782116|ref|YP_001710449.1| coproporphyrinogen III oxidase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156685|emb|CAQ01844.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clavibacter michiganensis subsp. sepedonicus]
          Length = 407

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 118/396 (29%), Positives = 187/396 (47%), Gaps = 18/396 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQL 65
            +   G  + + GVY+H PFC  +C YCDFN++       V Q ++    + E+++    
Sbjct: 19  ASAAEGADARAFGVYLHVPFCRVRCGYCDFNTYTAPELRGVKQSDYASQAVQEVRFAGSA 78

Query: 66  TGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                   R  S++F GGGTP+L+  +++  +LD +   W ++   E+T EANP SV+  
Sbjct: 79  LRESGVPARPASTVFLGGGTPTLLPVEDLVRMLDAVRDTWGIAEGAEVTTEANPDSVDDA 138

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
                   G  R+S G+QS   + L  L R H+ +     +  AR     +S DLIY  P
Sbjct: 139 YLAALAAGGFTRVSFGMQSAVPRVLATLERTHDPARIAPVVRGARAAGLEVSLDLIYGTP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T+  W   L++A++   DHLS Y L +E GT   +  + G++  P E++  D+Y L  
Sbjct: 199 GETIDDWRASLEQAIAQEPDHLSAYALIVEPGTKLARQIRRGEVPEPDEDLQADMYELAD 258

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            +    G   YE+SN +  G  S HNL YW+  D+ G+GPGAHS V      V     KH
Sbjct: 259 RMLGEAGYEWYEVSNWARDGRRSRHNLAYWQGHDWWGVGPGAHSHVGG----VRWWNVKH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P +    V         +E L    +  E +++G R+R+G+++        R +      
Sbjct: 315 PAAHADRVLAGASPGAGRESLDDATREVERVLLGARIRDGLAIPTLTAEGRRQV-----A 369

Query: 361 NLQRQGFIERVQF--SRLRCTQRGMTMLDSVIANLA 394
            L   G +E        L  T +G  + DSV+  L 
Sbjct: 370 GLIADGLVEPRAALSGTLVLTLQGRLLADSVVRRLL 405


>gi|163845807|ref|YP_001633851.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222523517|ref|YP_002567987.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
 gi|163667096|gb|ABY33462.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222447396|gb|ACM51662.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
          Length = 393

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 129/398 (32%), Positives = 193/398 (48%), Gaps = 30/398 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS------- 72
            +Y+H PFC ++C YCDFN++        E ++ +   E+  +R    P   S       
Sbjct: 3   HLYLHIPFCHRRCSYCDFNTYANMEH-RIEAYVDALCQELAMLRDQLPPLPASPEAAALR 61

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGV 130
            SIFFGGGTPS++ P  I  IL   A+   ++   EI++EANP +V   +  +  R  G+
Sbjct: 62  PSIFFGGGTPSMLSPAQIERILQAAAEIVPLTG-AEISLEANPGTVLGRDYLRDLRSLGI 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQSL + +LR LGR H A+EA A+ + AR   F  ++ D I+ LP Q + QW  
Sbjct: 121 NRLSMGVQSLHDPTLRMLGRIHTAAEAYASFNDARAVGFESINLDFIFGLPGQDIEQWRA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   + + VDH++LY L +E+ T  Y     G L +P +++   +Y L   +  A G  
Sbjct: 181 TLTEIIRWEVDHIALYSLILEENTPLYAQVTAGRLQIPDDDLTGAMYELAMEMLGAAGYR 240

Query: 250 AYEISNH----------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            YEISN           +       HNL YW   DY+  G GAH  V    +     I  
Sbjct: 241 HYEISNWVRPSVSDRPDAPPALACQHNLAYWLNSDYLAAGAGAHGHVFPQRYANLRPI-- 298

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC- 358
             +S++  V+     + E   L+S   A E + MGLRL  G+    +    G++L     
Sbjct: 299 --DSYITAVQSGRRPIAETTLLTSADLAAETMFMGLRLDIGVGFAHFAARVGQSLLDYYG 356

Query: 359 --ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                L +QG IE     R+  T RG  + + V A+  
Sbjct: 357 PTLEQLSQQGLIE-CSAQRVYLTPRGRMLGNQVFAHFV 393


>gi|94994313|ref|YP_602411.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS10750]
 gi|94547821|gb|ABF37867.1| Coproporphyrinogen oxidase (NAD) [Streptococcus pyogenes MGAS10750]
          Length = 376

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 202/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E        G R + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLRALIQEFDSY----GIRDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 57  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I   +   F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G   +       R LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGMPFEERYGNIVRELQNQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|293189689|ref|ZP_06608406.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces odontolyticus F0309]
 gi|292821427|gb|EFF80369.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces odontolyticus F0309]
          Length = 438

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 120/414 (28%), Positives = 176/414 (42%), Gaps = 37/414 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGP--- 68
           +    L +YVH PFC  +C YCDFN++   +  G +  ++  S L E     ++      
Sbjct: 27  EARRPLSLYVHVPFCRVRCGYCDFNTYTVGFGPGAQVGDYAPSVLAEATLAARVMAESGL 86

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R   ++FFGGGTP++++   +A IL G+ +   ++   E+T+EANP +V         
Sbjct: 87  PVREAETVFFGGGTPTMLDTAELAEILTGLRERIGIAPGAEVTLEANPDTVTREGLVQLA 146

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG  R+S G+QS     L+ L R H        +  A+      S DLIY  P ++   
Sbjct: 147 DAGFTRVSFGMQSAVPAILKTLDRTHTPERVPLVVQWAKEAGLSTSVDLIYGTPGESFAD 206

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           WE  L+ ALSY  DH+S Y L +E GT        G+L  P  +     Y L   + S  
Sbjct: 207 WETSLRAALSYDTDHISAYALVVEGGTKMGAQVARGELPTPDPDDEAAKYELADVLLSEA 266

Query: 247 GLHAYEISNHSFL--------------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
           G   YEISN +                   S HNL YWR  D+ G+GPGAHS V      
Sbjct: 267 GYAWYEISNFARTTDADLTSGRPSTFYAHASAHNLAYWRDWDWWGLGPGAHSHVG----C 322

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW------ 346
           +     K+P ++   +R         E L  + +  E +M+G+R  EGI +         
Sbjct: 323 MRWWNVKNPAAYAARLRDGRSPAYAGEILDEDTRELERVMLGVRTSEGIELAGLPGTGQA 382

Query: 347 ----EMLAGRNLDIECERNLQRQGFIERVQ--FSRLRCTQRGMTMLDSVIANLA 394
                 L    +       L   G I+       R+  T RG  + D V   L 
Sbjct: 383 DEAGAALGAGAVSGGRVAALIADGLIDGAAALGGRVILTLRGRLLADYVTRELM 436


>gi|260892504|ref|YP_003238601.1| oxygen-independent coproporphyrinogen III oxidase [Ammonifex
           degensii KC4]
 gi|260864645|gb|ACX51751.1| oxygen-independent coproporphyrinogen III oxidase [Ammonifex
           degensii KC4]
          Length = 378

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 114/380 (30%), Positives = 190/380 (50%), Gaps = 11/380 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
           G+Y+H PFC +KC YCDF S+  R +   E ++     E+ + R++ G R  + +++ GG
Sbjct: 5   GIYLHVPFCRRKCFYCDFVSYPYREEAALE-YLTGLKREILFWREVYGSRLKVPTLYLGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + +  I   I ++++  S  E+T+EANP ++     +     GVNR+S+G+Q
Sbjct: 64  GTPTCLPLKLLEEIFSIIYQSFSFLSRAEVTVEANPETLTPELVELLVAWGVNRLSIGMQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +L  + L+ LGR H  +E + ++ + R      ++ DLIY LP QT+  W   L+ A++ 
Sbjct: 124 ALRPEHLKLLGRGHTFAEVVESVKICRRAGLENINLDLIYGLPGQTLADWRETLRAAVAL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y L +E+ TL  K    G+L    E    ++Y          G   YEISN +
Sbjct: 184 EPTHLSAYALELEEHTLLGKRVAKGELSPCEEETVREMYLEAIDFLEGRGYRHYEISNFA 243

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E  HNL YWR   Y+G+GP AHS ++      A        ++L+++ +    VVE
Sbjct: 244 LPGKECRHNLGYWRLSPYLGLGPAAHSFLEGKRWANAA----DLATYLRLLEEGKRPVVE 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFS 374
              +  ++   E + +GLRLR+G+    +    G  L+         L +QG +E     
Sbjct: 300 VVEVGRKEAMAEAMFLGLRLRQGVHRLWFAARFGSTLEEAYGPVLERLVKQGLLE-YDGG 358

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R T   + + + V     
Sbjct: 359 WVRLTPMALPVANQVFMAFV 378


>gi|331004572|ref|ZP_08328040.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           oral taxon 107 str. F0167]
 gi|330410621|gb|EGG90046.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           oral taxon 107 str. F0167]
          Length = 385

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 210/384 (54%), Gaps = 8/384 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +YVH PFC +KC YCDF S  +     ++ ++   + E++   Q      +SSIF 
Sbjct: 4   KKLELYVHIPFCEEKCKYCDFLSF-KADDGEKKAYVTQLIEEIKAQGQNYSDYLVSSIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +    I  I++ I +N+ V ++ E++IE NP ++  +     +KAGVNRIS G
Sbjct: 63  GGGTPTTLNGIWILDIMNAIRENFMVETDAEVSIECNPGTLSTSKIMHIKKAGVNRISFG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  E+ L+ LGR H   + + +  LAR   F  ++ DL+  LPKQT+  ++  L+R  
Sbjct: 123 LQSSIEEELKELGRIHTYKDFLQSYQLAREYGFTNINVDLMSGLPKQTIDSYKTTLKRVC 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD--LVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +   +H+S Y L IE GT F++ +   +   +LP EN   ++Y LT+SI   HG   YEI
Sbjct: 183 ALKPEHISAYSLIIEPGTPFFEKYGSEEGAQLLPGENTDREMYALTKSILKEHGYERYEI 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G E  HN+ YW    Y+G+G GA   V      V     K+    +KM +    
Sbjct: 243 SNYAKPGRECRHNIGYWTGVSYLGLGVGASGYVMNRRFHVESDYRKYMS--VKMQQDITP 300

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
              + E L  +   +EF+ +GLRL +G+S  ++    G ++    +R ++R   ++ +++
Sbjct: 301 LYCDIEELDIKANMEEFMFLGLRLTKGVSRHEFNEKFGVDMFEVFDRQIKRNMMLKLMEY 360

Query: 374 S--RLRCTQRGMTMLDSVIANLAV 395
           +   LR T++G+ + + V+++  +
Sbjct: 361 NSPYLRLTEKGLDLSNMVMSDFLL 384


>gi|320103904|ref|YP_004179495.1| oxygen-independent coproporphyrinogen III oxidase [Isosphaera
           pallida ATCC 43644]
 gi|319751186|gb|ADV62946.1| oxygen-independent coproporphyrinogen III oxidase [Isosphaera
           pallida ATCC 43644]
          Length = 395

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 14/386 (3%)

Query: 15  GSNSL-GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            +  +   YVH PFC  KC YCDF S      +  + ++ +   E++ + +   P  + +
Sbjct: 18  AAGPIRAAYVHIPFCAHKCGYCDFASLAGADHLA-DRYLDALEREIERVLE-GRPAPVET 75

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTP+ +    +  +   ++  + + S  E T+EANP +++ +  +   + GVNRI
Sbjct: 76  VFVGGGTPTRLTAAQLERLTAMVSSWFPLVSGGEWTVEANPGTLDRDKVEVLVQGGVNRI 135

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG QS + +SL  L R H+ +E +  + L  + F R S DLI+ +P  T+  W+ +L  
Sbjct: 136 SLGAQSFQRRSLAILERAHDPAEVVRGVELIASRFDRWSLDLIFGVPGSTLNDWKADLSA 195

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+    HLS Y L  EKGT  +K  + G++    + +   +++ T       GL AYEI
Sbjct: 196 ALALGPSHLSCYGLIFEKGTPLWKRRRRGEVSSVPDELERAMFDHTVETLETAGLSAYEI 255

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SNH+  G E  HNL YW    + G+G GA +              +   ++L  +     
Sbjct: 256 SNHARPGHECRHNLIYWANEPFYGVGLGAAAYRNGERTVNT----RDLNAYLARIEAGRS 311

Query: 314 AVVEKEFLSSEQQADEFLMMGL-RLREGISVKDWEMLAGRNLD----IECERNLQRQGFI 368
            +  +E L    +A E  M+ L R+  GI   ++ +  G +LD        ++LQR G++
Sbjct: 312 PIGPRERLEPRARAGETAMLMLRRVVLGIDRAEFRLRTGYDLDTLYSDVIAKHLQR-GWL 370

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           E     R+R T+    + D+V+ +  
Sbjct: 371 E-DDGRRVRLTRASWFLSDAVMVDFV 395


>gi|146328678|ref|YP_001209061.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Dichelobacter nodosus VCS1703A]
 gi|146232148|gb|ABQ13126.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Dichelobacter nodosus VCS1703A]
          Length = 382

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 130/389 (33%), Positives = 211/389 (54%), Gaps = 12/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +Y+H P+C++KCPYCDFNSH R     +  ++   L +          R 
Sbjct: 1   MLDPARIPLSLYIHIPWCLRKCPYCDFNSHARTADDNESAYVHHLLQDFSLD---YDGRP 57

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S+F GGGTPSL   + IAL+LD + +    + + EIT+EANP++ E   F  YR++G+
Sbjct: 58  LHSVFIGGGTPSLFHSEQIALLLDELRQRADFTDDCEITLEANPATFEQQKFSAYRQSGI 117

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEM 189
           NR+SLG+QSL+ + L+ LGR H+A EA  A+ LA+   F +++ D+++ALP QT+ +   
Sbjct: 118 NRLSLGIQSLQPRHLQQLGRVHSADEAKQALRLAQSMNFHQINTDVMFALPAQTLDEARA 177

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ+ ++   +H+S YQLTIE  T F+         LP  +  V+LY    +   A G +
Sbjct: 178 DLQKIIALGAEHISWYQLTIEPNTAFFVRPPK---ALPDSDQQVELYENGSAFLRAQGFN 234

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMV 308
            YE+S  +     + HN+NYW +GDY+GIG GAHS++ +   ++   S  + P ++    
Sbjct: 235 QYEVSAWTKTT-PAKHNMNYWLFGDYLGIGAGAHSKITIADGKIMRQSKYRAPAAYQARS 293

Query: 309 RKNGHAVVEK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQ 365
            +N +   +    +   +QA E +M GLRLR G         +  +L   +     L  +
Sbjct: 294 GRNRNPYQDNCRRVPKTEQAFEVMMNGLRLRAGFPTAFLAQRSDLDLSDLMPTLLPLIDR 353

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G I+      +  T RG ++L++V+    
Sbjct: 354 GLIDADIAECIVTTPRGFSLLNNVLEAFL 382


>gi|27468188|ref|NP_764825.1| coproporphyrinogen III oxidase [Staphylococcus epidermidis ATCC
           12228]
 gi|27315734|gb|AAO04869.1|AE016748_103 oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           epidermidis ATCC 12228]
 gi|329737145|gb|EGG73399.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU028]
          Length = 374

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 196/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC + C YCDFN +    K   + ++ + ++EM    Q+   R + +++ GGG
Sbjct: 5   SAYIHIPFCYRICTYCDFNKYFI-DKQPVDEYLDALISEM----QVKNNRDLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I + +T+S   E + EANP  +        ++ GVNRIS+GVQ+
Sbjct: 60  TPTALNMRQLEKLLRAINQTFTISG--EFSFEANPDELTYEKVALLKQYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA++  
Sbjct: 118 FKPELLKILGRTHKTEDIYDAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAIALD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN   
Sbjct: 178 IDHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYRFLMERMKNSPFHQYEISNFGK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           L  ES HN  YW   +Y G G GA   V    +     +      ++K + +    ++ +
Sbjct: 238 LNHESNHNKVYWLNEEYYGFGAGASGYVNGVRYTNLNPVN----HYIKAINEGKKPILSE 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
              +  ++ +E + +GLR+ +G+S   ++    + +D   +E  ++L+ +G I+  +   
Sbjct: 294 TSPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFVETIKDLRCRGLIKE-EGEF 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|153933683|ref|YP_001385222.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. ATCC
           19397]
 gi|226950388|ref|YP_002805479.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A2 str. Kyoto]
 gi|152929727|gb|ABS35227.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A str. ATCC 19397]
 gi|226842192|gb|ACO84858.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A2 str. Kyoto]
          Length = 380

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 TVVGLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ +++ ++  +
Sbjct: 356 EKEN-RIYLSKEAVSISNTIFSDFLL 380


>gi|330839598|ref|YP_004414178.1| oxygen-independent coproporphyrinogen III oxidase [Selenomonas
           sputigena ATCC 35185]
 gi|329747362|gb|AEC00719.1| oxygen-independent coproporphyrinogen III oxidase [Selenomonas
           sputigena ATCC 35185]
          Length = 385

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 196/383 (51%), Gaps = 12/383 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFG 77
            GVYVH PFC +KC YCDF S+    +     + ++   E+     +     ++ +++ G
Sbjct: 4   FGVYVHIPFCRRKCFYCDFPSYAG-EERWMSRYREALCREIAAQGCRCLQEGAVRTVYIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +   ++  ++  + +++ ++   E T+EANP +V+    +  R+AGVNR+S GV
Sbjct: 63  GGTPTALAADDLLAVICSVRESFHLTGAEEFTVEANPGTVDAKLLERLREAGVNRLSFGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  +GR H A EA  A+ +A+    R+S DL+Y LP QT++  +  + RA + 
Sbjct: 123 QSFSDALLAAIGRIHTAREAEDAVRMAQKAGFRVSLDLMYGLPGQTLSDLKDSVARAAAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S+Y L +E GT F +M + G L LP+++   D+Y+   +     G   YEISN++
Sbjct: 183 GIGHISVYGLAVEDGTPFARMEEAGRLHLPTDDKCGDMYDYITAELPRLGYRRYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG--HAV 315
             G ES HNL YW+   YIG+G  AHS      H      E+    ++  +   G     
Sbjct: 243 RAGEESRHNLAYWQDVSYIGLGAAAHSYW----HGQRTENEQDLCRYIACIEGEGGLSLA 298

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E+E  S E   +EF  + LR  +GI  K +      ++     E    LQ  G +E   
Sbjct: 299 REEEPCSRESHIEEFAFLALRTADGIDKKRFRGTFASDVHEVYGEVIARLQAAGLVEETA 358

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            S +R T++GM   + V     +
Sbjct: 359 VS-IRLTEQGMKFGNRVFEAFLL 380


>gi|227495111|ref|ZP_03925427.1| coproporphyrinogen dehydrogenase [Actinomyces coleocanis DSM 15436]
 gi|226831563|gb|EEH63946.1| coproporphyrinogen dehydrogenase [Actinomyces coleocanis DSM 15436]
          Length = 420

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 123/413 (29%), Positives = 197/413 (47%), Gaps = 35/413 (8%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQL 65
           +  + G+ S +L +Y+H PFC  +C YCDFN++   +  G +  ++ QS   E+    Q+
Sbjct: 18  DPAVVGKTSKNLSLYIHVPFCKVRCGYCDFNTYTVGFGEGADISSYHQSVFREIDLAAQV 77

Query: 66  TGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             P     + S+F GGGTP++++ Q++A +L      ++ + N E+T EANP SV+  + 
Sbjct: 78  LAPYEHNPVQSVFVGGGTPTMLDAQHLAEVLGYARTKFSFAPNCEVTTEANPDSVDARSL 137

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +     G  R+S G+QS  +Q LR L R H+       +  A+      S DLIY  P +
Sbjct: 138 ETLAAGGFTRVSFGMQSAVKQVLRTLDRTHDPKRIQRVVKWAQQAGMDTSLDLIYGTPGE 197

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++  WE  L  ALS   +H+S Y L IE+GT  +K  + G L +P  +     Y L   +
Sbjct: 198 SLVDWEASLSAALSAGTEHISTYALVIEEGTKMWKDVQRGHLPMPDPDDEAAKYELADLL 257

Query: 243 TSAHGLHAYEISNHSF-----------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
            S  G   YEISN +            L   S+HNL YWR  D+ GIGPGAHS +     
Sbjct: 258 LSEAGFAWYEISNWARLEPGESSGTTQLTYASVHNLAYWRDDDWWGIGPGAHSHLGN--- 314

Query: 292 RVAISIEKHPESWLKMVRKNG---HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE- 347
            +     KHP +W   + +           E L++ +++ E  ++ +R  +G+ + + + 
Sbjct: 315 -LRWWNRKHPRAWADALGRGESFLSPAQAGEELTAAERSLERFLLQIRTADGLGLSEVDP 373

Query: 348 MLAGRNLDIECERNLQRQGFIERVQF-----SRLRCTQRGMTMLDSVIANLAV 395
            L GR         L  Q  +          + L+ T +G  + D V   L V
Sbjct: 374 DLRGR------IPALVGQELLTLTGNPNQGDAVLQLTLQGRLLADYVTRELTV 420


>gi|108800439|ref|YP_640636.1| coproporphyrinogen III oxidase [Mycobacterium sp. MCS]
 gi|119869568|ref|YP_939520.1| coproporphyrinogen III oxidase [Mycobacterium sp. KMS]
 gi|108770858|gb|ABG09580.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. MCS]
 gi|119695657|gb|ABL92730.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. KMS]
          Length = 392

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 174/389 (44%), Gaps = 14/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG- 67
           +        G+Y+H PFC  +C YCDFN++      G   E ++ +   E+    +  G 
Sbjct: 13  LAATAGRPFGLYIHVPFCATRCGYCDFNTYTPAEAGGANPEGWLVAMRQELALAARTLGT 72

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  + ++F GGGTPSL+    +  +L  + +++ ++   E+T EANP S     F     
Sbjct: 73  PPPVRTVFVGGGTPSLLGGAGLTAVLAAVREHFDLAPGAEVTTEANPESSGPELFDALLA 132

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS     L+ L R H+   A+AA   AR      ++ DLIY  P +T   
Sbjct: 133 AGYTRVSLGMQSTARHVLKVLDRLHSPGRAVAAAGEARAAGFGHVNLDLIYGTPGETDDD 192

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L  +     
Sbjct: 193 LRRSADAAIGAGVDHVSAYALVVEDGTALARRVRRGEVTAPDDDVLAARYELLDARLGEA 252

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+SN +  G E  HNL YW  G++ G+GPGAH  +            KHP ++  
Sbjct: 253 GFDWYEVSNWARSGGECRHNLGYWAGGEWWGVGPGAHGFLGDTR----WWNVKHPNAYAT 308

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +      V + E L    +  E +M+ +RLR G+ +          +       L    
Sbjct: 309 ALGDGALPVSDFEVLDPAARHTEDVMLRVRLRSGLPLDMLTADERSRVGTVVADGLA--- 365

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               V  + L  T RG  + D V+  L  
Sbjct: 366 ---VVDGAALVLTDRGRLLADGVVRTLLA 391


>gi|187933035|ref|YP_001885089.1| coproporphyrinogen III oxidase [Clostridium botulinum B str. Eklund
           17B]
 gi|187721188|gb|ACD22409.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B str. Eklund 17B]
          Length = 379

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 194/383 (50%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC +KC YCDF S+  + K     +I S   E++          I SIF 
Sbjct: 7   KEISLYIHIPFCKQKCLYCDFPSYSGKEK-FISEYINSLNKEIRAKAS---NYKIKSIFI 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +    +  +L  I    T+  N+E T+E NP S+  +  +  +K  VNRIS+G
Sbjct: 63  GGGTPSYLNEIELEKLLKCINTL-TLEENLEFTMECNPGSLNEDKLKIMKKYNVNRISMG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ +GR H   E      LAR   F  ++ DL++ LP Q++  W   L++ +
Sbjct: 122 LQSTKLSLLKEIGRIHTLEEFENNYLLARKVGFKNINIDLMFGLPNQSVEDWRKTLEKII 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  +H+S Y L IE+GT FY ++  G L LPSE    D+Y LT+ +   +G   YEISN
Sbjct: 182 EFNPEHISAYSLIIEEGTCFYNLYNQGKLNLPSEEKERDMYLLTKELLKDNGYSQYEISN 241

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    E  HN+ YW+  +Y+G+G  A S +        I      E ++K +  N    
Sbjct: 242 FSKEEKECYHNIVYWQLNEYLGVGVSASSYINGKR----IKNIDDIEFYIKNINSNQSVE 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
            E    +     +EF+ MGLR+  GI  +D++    ++++      +    +Q  +   +
Sbjct: 298 NEIYENNINDNMEEFVFMGLRMINGIEERDFKERFKKDINEVYGEVIDKNIKQELLVHNE 357

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             R+  T RG+ + +SV+++  +
Sbjct: 358 -GRIYLTSRGIEVSNSVMSDFII 379


>gi|322807281|emb|CBZ04855.1| putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent [Clostridium botulinum H04402 065]
          Length = 380

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 112/386 (29%), Positives = 197/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 TVVGLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    ++++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----KTYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ +++ ++  +
Sbjct: 356 EKEN-RIYLSKEAVSISNTIFSDFLL 380


>gi|306827443|ref|ZP_07460728.1| coproporphyrinogen III oxidase [Streptococcus pyogenes ATCC 10782]
 gi|304430358|gb|EFM33382.1| coproporphyrinogen III oxidase [Streptococcus pyogenes ATCC 10782]
          Length = 376

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 201/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLEALIQEFESY----DIHDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I    +  +L  + +N  +    E TIEANP  +  +  +  + + VNRIS
Sbjct: 57  YIGGGTPTAITAAQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLKHSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I   +   F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIVRELQNQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|148380914|ref|YP_001255455.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum A str. ATCC 3502]
 gi|148290398|emb|CAL84525.1| oxygen-independent coproporphyrinogen iii oxidase [Clostridium
           botulinum A str. ATCC 3502]
          Length = 383

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 8   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 63

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 64  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 122

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 123 SIGLQSSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 182

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 183 TVVGLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 242

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 243 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNN 298

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 299 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 358

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ +++ ++  +
Sbjct: 359 EKEN-RIYLSKEAVSISNTIFSDFLL 383


>gi|282883122|ref|ZP_06291721.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus lacrimalis 315-B]
 gi|281296934|gb|EFA89431.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus lacrimalis 315-B]
          Length = 380

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 123/384 (32%), Positives = 190/384 (49%), Gaps = 11/384 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             N + +Y+H PFC  +C YCDF S V   K   E +I+    E+   + +   R IS+I
Sbjct: 3   KKNKISIYIHIPFCRSRCHYCDFCSSVI-DKKQVEKYIKYLKKEIHLYKDILEGREISTI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS I+   I  IL+   KN+  S ++EITIEANP+S+ +   + YR   +NRIS
Sbjct: 62  FIGGGTPSSIDEIFIGQILEEF-KNFNFSKDIEITIEANPNSLSLEKLKKYRNFNINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS   + L+ +GR HN  E    +   +   F   + DL+ ALP QT+   E  ++ 
Sbjct: 121 IGAQSFNNKILKTIGRIHNKEEIFKTVEKIKEAGFTNFNIDLMLALPYQTLKDIEESVEI 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +H+S Y L IE  T   K++     + PSEN+   +Y+         G   YEI
Sbjct: 181 LKILNPNHISYYSLIIEDNTNIKKLYDKNSSLFPSENMDRKMYHYLVDNLEKIGYDQYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +    E  HNL+YW   DY+G G  A S ++        S      S+   + K   
Sbjct: 241 SNFAKKSFECKHNLSYWTLKDYLGFGLSASSNLREKRFTNTCSFP----SYYNSLDKEEK 296

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
            +   E LS + + +EF +MG+RL  GI  K++E +   N     E+ +    + G IE 
Sbjct: 297 PIDFSEILSKKDRMNEFSIMGIRLNSGIDTKNFEEIFSTNFFKYYEKEIDKHIKDGLIE- 355

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           V+  ++  +++G  + + V  +  
Sbjct: 356 VKKDKICLSKKGRDLSNIVEVDFI 379


>gi|83945044|ref|ZP_00957410.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Oceanicaulis alexandrii HTCC2633]
 gi|83851826|gb|EAP89681.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Oceanicaulis alexandrii HTCC2633]
          Length = 386

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 157/381 (41%), Positives = 220/381 (57%), Gaps = 12/381 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVHWP+C + CPYCDFN +   +    E  + + L ++   R   G R + S+ FGG
Sbjct: 8   LGLYVHWPYCARICPYCDFNVYKAAHAQP-EALLDAMLRDLAHWRARLGARPVHSVHFGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+EP  IA IL+     + ++   EI +EANP  +E   F+G   AGV R+SLGVQ
Sbjct: 67  GTPSLMEPSAIAAILEQADALFGLAPGAEIGLEANP--MEHERFEGIATAGVERLSLGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +L++ SL+ LGR+H+A   + A+  A+++F  +S DLIYA   QT   W  EL+ AL + 
Sbjct: 125 ALDDDSLKALGRDHDARTGLQALECAQSLFKHVSLDLIYARENQTPEGWRAELETALGFG 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLYQLTIE GT F +  K G L  P ++ A D+Y LTQ + ++ GL +YEISNH+ 
Sbjct: 185 TGHMSLYQLTIEPGTAFARKLKRGALTPPPDDAAADMYALTQDVCASAGLPSYEISNHAR 244

Query: 259 LGA-ESLHNLNYWRYGDYIGIGPGAHSRV--KVGSHRVAISIEKHPESWLKMVRKN-GHA 314
             A +S+HN  YW   D+IGIGPGAHSRV       R   +  + PE +++ V    GH 
Sbjct: 245 SAADQSVHNRLYWEGEDWIGIGPGAHSRVGAHASGGRGGAAAHRRPEHYMEGVLSGDGH- 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLR-EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
             E+E L +E +  E L+MG+RL   G+ V     L G + D +    +  QG I +   
Sbjct: 304 --ERETLDAEAEFIERLLMGIRLTGSGLDVARLHALTGLSPDAQGLARMTAQGLI-KAGD 360

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           S L  T+RG    D V   L 
Sbjct: 361 SALVLTERGRAFADHVAETLI 381


>gi|317475602|ref|ZP_07934863.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908172|gb|EFV29865.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 377

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 193/379 (50%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  +I +   E+Q  ++      + +++FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTRSEL--KSRYIHALCKELQMRKEYLRGEPVETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   + + I K + +    EIT+EANP  +        ++   NRIS+G+Q+
Sbjct: 61  TPSQLAEEDFREVFETIRKYYGMEHCREITLEANPDDLTEEYTAMLQQLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R H+A +A+ A+H  R   F  +S DLIY LP +T  +W+ +LQ+A+S  
Sbjct: 121 FDDATLKLLNRRHDAEQAVKAVHHCRRAGFNNISIDLIYGLPGETDERWKRDLQQAVSLG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT E+GT  Y++ +   +    E  +V  ++         G   YEISN   
Sbjct: 181 VEHISAYHLTYEEGTRIYELLQAHRIHEVDEESSVRFFSTLMDTLDNAGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YWR   Y+G GP AHS           S+E +  S     R+      E 
Sbjct: 241 PGMYSRHNTSYWRGIPYLGCGPSAHSFNGDSREWNISSLEDYIHSIENNCRR-----FEN 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L+   + +E +M  +R R G+ +   E   GR L   C          G +E ++ + 
Sbjct: 296 EHLNRSTRYNECIMTSIRTRWGVPMDIMEQRFGRELWQYCMDMALPHLNDGKLE-IRDNH 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T++G+ + D ++++L 
Sbjct: 355 LCLTRKGIFVSDGIMSDLM 373


>gi|284042631|ref|YP_003392971.1| oxygen-independent coproporphyrinogen III oxidase [Conexibacter
           woesei DSM 14684]
 gi|283946852|gb|ADB49596.1| oxygen-independent coproporphyrinogen III oxidase [Conexibacter
           woesei DSM 14684]
          Length = 415

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 129/396 (32%), Positives = 187/396 (47%), Gaps = 23/396 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT----- 66
           G    G+YVH PFC  +C YCDFN++      G   + ++  S + E+   R++      
Sbjct: 26  GERPFGIYVHVPFCATRCGYCDFNTYTAEELPGGVNRNSYAASAIAELALARRVLSGGDR 85

Query: 67  ------GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                  P  + ++FFGGGTP+L+  +++A ILD I   + ++   E+T EANP SV   
Sbjct: 86  SGGCTAAPPLVETVFFGGGTPTLLPAEDLAGILDAIDLLFGLAPRAEVTTEANPESVTPA 145

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYAL 179
                R AG  RISLG+QS     L  L R H     A A        F  +S DLIY  
Sbjct: 146 TLATLRAAGFTRISLGMQSAVGHVLDVLDRTHTPGRAAAAVAEARAAGFEHVSLDLIYGT 205

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    W   ++ AL  A DH+S Y LT+E GT  +   + G+L  P E+   D Y + 
Sbjct: 206 PGERDADWRASVETALGAAPDHVSAYALTVEPGTRLHARVQRGELPSPDEDALADRYAIA 265

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               +A GL  YEISN +    A   HN+NYWR GD+ G+GPGAHS V      V     
Sbjct: 266 DEAFAAAGLRWYEISNWAGSEPARCAHNVNYWRGGDWWGVGPGAHSHVGG----VRWWNV 321

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
            HP ++   + +       +E L +E +  E +M+  RL EG+                 
Sbjct: 322 LHPSAYATALAERRSPAAGREQLDAETRRFERIMLETRLSEGLDAALLREDGRAAAARAA 381

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  L      E +   R+R T+RG  + D+V+ +L 
Sbjct: 382 DEGLAEP---EALAEGRVRLTRRGRLLADAVVRDLV 414


>gi|57867040|ref|YP_188727.1| coproporphyrinogen III oxidase [Staphylococcus epidermidis RP62A]
 gi|251811000|ref|ZP_04825473.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875991|ref|ZP_06284858.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus epidermidis SK135]
 gi|293366456|ref|ZP_06613133.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|57637698|gb|AAW54486.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Staphylococcus epidermidis RP62A]
 gi|251805510|gb|EES58167.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295016|gb|EFA87543.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus epidermidis SK135]
 gi|291319225|gb|EFE59594.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329725327|gb|EGG61810.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU144]
 gi|329735227|gb|EGG71519.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU045]
          Length = 374

 Score =  334 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 195/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC + C YCDFN +    K   + ++ + ++EM    Q+   R + +++ GGG
Sbjct: 5   SAYIHIPFCYRICTYCDFNKYFI-DKQPVDEYLDALISEM----QVKNNRDLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I + +T+S   E + EANP  +        ++ GVNRIS+GVQ+
Sbjct: 60  TPTALNMRQLEKLLRAINQTFTISG--EFSFEANPDELTYEKVALLKQYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA++  
Sbjct: 118 FKPELLKILGRTHKTEDIYDAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAIALD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN   
Sbjct: 178 IDHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYRFLMERMKNSPFHQYEISNFGK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           L  ES HN  YW   +Y G G GA   V    +     +      ++K + +    ++ +
Sbjct: 238 LNHESNHNKVYWLNEEYYGFGAGASGYVNGVRYTNLNPVN----HYIKAINEGKKPILSE 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              +  ++ +E + +GLR+ +G+S   ++    + +D    E  ++L+ +G I+  +   
Sbjct: 294 TSPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFGETIKDLRCRGLIKE-EGEF 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|94988511|ref|YP_596612.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS9429]
 gi|94992336|ref|YP_600435.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS2096]
 gi|94542019|gb|ABF32068.1| oxygen-independent coproporphyrinogen-III oxidase [Streptococcus
           pyogenes MGAS9429]
 gi|94545844|gb|ABF35891.1| Coproporphyrinogen oxidase (NAD) [Streptococcus pyogenes MGAS2096]
          Length = 408

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 120/385 (31%), Positives = 203/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 34  SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFESY----DIHDLKTL 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 89  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 149 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLEQVKENVAK 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 209 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 269 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 323

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 324 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEERYGNIVRELQNQGLLVK 383

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 384 -DDAFVRMTKKGLFLGDSVAERFIL 407


>gi|51244568|ref|YP_064452.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotalea
           psychrophila LSv54]
 gi|50875605|emb|CAG35445.1| related to oxygen-independent coproporphyrinogen III oxidase
           [Desulfotalea psychrophila LSv54]
          Length = 387

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 124/379 (32%), Positives = 193/379 (50%), Gaps = 10/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KC YC FNS+  +  +    +I +   E+ ++    G R + ++FFGGG
Sbjct: 15  SLYLHIPFCRSKCRYCAFNSYSGQGHLFV-RYIAALKRELSFLFSEYGGRPLDTVFFGGG 73

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+++    +  ILD   + W  S   EI+ EANP +V   +    R+ G NRIS GVQS
Sbjct: 74  TPTVLGAAGLVEILDHCQQLWGWSKQAEISTEANPETVSAADLILLRRGGFNRISFGVQS 133

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L +  L  LGR H+A+ AI A+  AR   F  ++ DL+  L  Q++  W   L  AL+  
Sbjct: 134 LSDHDLLSLGRAHSAARAIQALEDARQAGFDNINLDLMSGLHGQSLQDWRRVLTEALTLK 193

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS+YQLT E+GT +Y     G  ++P +++++ +  LT  +    GL  YE+SN++ 
Sbjct: 194 PDHLSVYQLTPEEGTPYYDDVMAGRALVPEDDLSLAMDALTWEMCRQAGLAQYEVSNYAQ 253

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +  HN+NYW   D +  G GA S       R      + P  + + V      +VE 
Sbjct: 254 SGKKCRHNVNYWLNSDSLAAGAGAVSFNGGQRARRL----EDPAEYCQCVEAGHSPIVES 309

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E L  E    E +++GLR+ EGI ++  +   G +L          L   G +E +    
Sbjct: 310 EELDREASFRETVIVGLRMIEGIEIQSLQDRYGIDLPAYYGVVLTGLLAAGLVE-LAGGF 368

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T +G  + + ++  L 
Sbjct: 369 LRITDQGRPLSNQILEKLV 387


>gi|184200950|ref|YP_001855157.1| putative oxygen-independent coproporphyrinogen III oxidase [Kocuria
           rhizophila DC2201]
 gi|183581180|dbj|BAG29651.1| putative oxygen-independent coproporphyrinogen III oxidase [Kocuria
           rhizophila DC2201]
          Length = 414

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 121/402 (30%), Positives = 182/402 (45%), Gaps = 26/402 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLT 66
            +      +L +YVH PFC  +C YCDFN++        V + ++      E+++ R + 
Sbjct: 20  AVARASERTLSLYVHVPFCAVRCGYCDFNTYTMEQLGDGVSRADYHADAAAEVRFARSVL 79

Query: 67  -----GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                 PR + S+FFGGGTP+L+  + +A +L    +++ ++   E+T+EANP SV    
Sbjct: 80  DAAGSPPRPLHSVFFGGGTPTLLPARELAAMLHQARESFGLAPGAEVTVEANPDSVTQET 139

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           F     AGV R+S G+QS     L  L R H  +    A+  A+      S DLI+  P 
Sbjct: 140 FDVLAAAGVTRVSFGMQSAVPHVLAVLERTHTPANVPRAVGWAKERGLGTSVDLIHGTPG 199

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +++  WE  ++  L+   DH+S Y L IE GT      + G++     +   D Y L   
Sbjct: 200 ESLRDWETSVEAVLAMEPDHVSAYSLIIEDGTKLAAQIRRGEVPEVDPDDQADKYTLADR 259

Query: 242 ITSAHGLHAYEISNHSFLGA-------ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           +    G   YE+SN S            S HN+ YWR  D+ GIGPGAHS V      V 
Sbjct: 260 MLRDAGFAWYEVSNWSRDAHGRTAQQNRSAHNIAYWRNQDWWGIGPGAHSHVDG----VR 315

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               KHP  +   VR      V +E L ++ Q  E +M+G+R+ EG+ V        R  
Sbjct: 316 WWNLKHPLPYTNRVRAGVSPAVGRETLDADTQYVEHVMLGIRISEGLPVASL-----RPE 370

Query: 355 DIECERNLQRQGFIERVQ--FSRLRCTQRGMTMLDSVIANLA 394
                  L   G+++           T  G  M D+V   L 
Sbjct: 371 GRRAVAGLIADGWLDGPAALAGTAVLTDAGRLMADAVTRRLL 412


>gi|331698269|ref|YP_004334508.1| oxygen-independent coproporphyrinogen III oxidase [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952958|gb|AEA26655.1| oxygen-independent coproporphyrinogen III oxidase [Pseudonocardia
           dioxanivorans CB1190]
          Length = 406

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 123/387 (31%), Positives = 180/387 (46%), Gaps = 17/387 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQLTGPRSI 71
               GVYVH PFC  +C YCDFN++            + ++++   E+     + G R +
Sbjct: 24  PTPFGVYVHVPFCASRCGYCDFNTYTADELADSGASPDGWLEAVRRELAGAAAVVGDRRV 83

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSLI  Q +  +LD +   + ++   E+T E+NP S     F G   AG  
Sbjct: 84  DTVFVGGGTPSLIGAQRLGAVLDAVRAEFGLAEGAEVTTESNPESTSPEFFAGLVDAGYT 143

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS     L  L R H    A+AA   AR      ++ DLIYA P +T       
Sbjct: 144 RVSLGMQSAASHVLAVLDRRHTPGRAVAAAREARAAGIGHVNLDLIYATPGETDDDLRAS 203

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   LS  VDH+S Y L +E GT   +  + G+L  P ++VA   Y +     S  GL  
Sbjct: 204 LDAVLSAGVDHVSAYSLIVEDGTALARRVRRGELPAPDDDVAAARYEILDDALSEAGLRW 263

Query: 251 YEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YE+SN +    A   HNL YW  GD+ G GPGAHS +            KHP  +  M+ 
Sbjct: 264 YEVSNWARDDAAACRHNLGYWLDGDWWGAGPGAHSHLAG----RRWWNVKHPARYAAMLA 319

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                    E L  E++A E +M+ LRL  G+ +   +                 +G ++
Sbjct: 320 AGEAPEAGHEVLGPEERATERVMLRLRLATGLPLDLLDAPGRAAAGRAAA-----EGLLD 374

Query: 370 --RVQFSRLRCTQRGMTMLDSVIANLA 394
              ++  R   T+RG  + D V+ +L 
Sbjct: 375 GAALETGRAVLTRRGRLLADRVVTDLL 401


>gi|284990170|ref|YP_003408724.1| oxygen-independent coproporphyrinogen III oxidase [Geodermatophilus
           obscurus DSM 43160]
 gi|284063415|gb|ADB74353.1| oxygen-independent coproporphyrinogen III oxidase [Geodermatophilus
           obscurus DSM 43160]
          Length = 406

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 122/393 (31%), Positives = 188/393 (47%), Gaps = 14/393 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
           ++   G      G+YVH PFC  +C YCDFN++          +  +  + + E++   +
Sbjct: 19  DSAREGLARTPFGLYVHVPFCATRCGYCDFNTYTADELGPGASRAEYAGTAIAELRQAAE 78

Query: 65  LTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             GP   ++S++F GGGTP+L+   ++A +L  + + + V+  VE+T EANP +V   + 
Sbjct: 79  TLGPDLPTVSTVFVGGGTPTLLAADDLAAVLAEVRRLFPVTPGVEVTTEANPETVTPASL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPK 181
              R AG  RISLG+QS  E  L  L R H       AA       F  ++ DLIY  P 
Sbjct: 139 ATLRAAGFTRISLGMQSAAEHVLAVLDRRHTPGRAVEAAREARAAGFEHVNLDLIYGTPG 198

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T   W   L   L+  VDH+S Y L +E+GT   +    G+L +P ++V  D Y    +
Sbjct: 199 ETDADWSASLDAVLAAPVDHVSAYALIVEEGTRLARRIDRGELPMPDDDVLADRYEQADA 258

Query: 242 ITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              A G   YE+SN +    A   HN  YW   ++ G+GPGAHS V      +     KH
Sbjct: 259 TLRAAGFDWYEVSNWARGEAARCRHNELYWANANWWGVGPGAHSHVGG----LRWWNVKH 314

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P ++   + +    V + E L  + +A E +M+GLRLREG+ +     +          R
Sbjct: 315 PAAYAGRLLRGESPVQDTELLDDDDRALETVMLGLRLREGLPLTALSEVGRARAARAVVR 374

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G        R   T RG  + D+++ +L
Sbjct: 375 GLLEPG---AHAAGRAVLTDRGRLLADALVRDL 404


>gi|262203055|ref|YP_003274263.1| oxygen-independent coproporphyrinogen III oxidase [Gordonia
           bronchialis DSM 43247]
 gi|262086402|gb|ACY22370.1| oxygen-independent coproporphyrinogen III oxidase [Gordonia
           bronchialis DSM 43247]
          Length = 401

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 116/386 (30%), Positives = 170/386 (44%), Gaps = 16/386 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRY----KVGQENFIQSFLTEMQWMRQLTGPRS 70
                G+Y+H PFC  +C YCDFN++           +                L+  R 
Sbjct: 24  PDTPFGLYLHVPFCATRCGYCDFNTYTAGELGSSSSPESWRRAVAAELELAAGMLSPARP 83

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +SSIF GGGTPSL+    +  +LD +  N+ ++ + EIT E+NP S     F G   AG 
Sbjct: 84  VSSIFVGGGTPSLLGASGLTELLDRVRDNFELADDAEITTESNPESTSPAFFDGLAAAGF 143

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
            R+SLG+QS     L  L R H       AA       F  ++ DLIY  P +T      
Sbjct: 144 TRVSLGMQSAAPHVLAVLDRIHTPGRAVAAAREATAAGFDHVNLDLIYGTPGETDADLHA 203

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +   L   VDH+S Y L +E GT   +  + G++  P ++V  D Y +     +  G  
Sbjct: 204 SIDAVLDAGVDHVSAYALIVEDGTALARRIRRGEMPAPDDDVLADRYRILDRRLTDAGFS 263

Query: 250 AYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            YE+SN +     E  HNL YWR  D+ GIGPGAHS V      V     KHP  + + +
Sbjct: 264 WYEVSNWARSASGECRHNLAYWRSDDWWGIGPGAHSHVNG----VRWWNVKHPARYAQTL 319

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            +        E L+ E +  E +M+  R REG+     +     + +    R L   G +
Sbjct: 320 GERHLPRASSETLTPEDRHVETVMLTARCREGLPASALD-----DAENRRARELCGDGLL 374

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              + S +  T  G  + D V+  + 
Sbjct: 375 TAGEDSYV-LTDEGRLLADGVVRRIL 399


>gi|313111995|ref|ZP_07797782.1| putative oxidase [Pseudomonas aeruginosa 39016]
 gi|310884284|gb|EFQ42878.1| putative oxidase [Pseudomonas aeruginosa 39016]
          Length = 363

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 119/369 (32%), Positives = 201/369 (54%), Gaps = 12/369 (3%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH    ++ +E ++ + L +++   +    R + SIFFGGGTPSL   + +
Sbjct: 2   RKCPYCDFNSHAAGPELPEEAYVDALLADLEQDLRHVHGRRLGSIFFGGGTPSLFSAKAL 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +L+G+ +    +  +EIT+EANP + E   F  YR+ G+NR+S+GVQS +   L+ LG
Sbjct: 62  GRLLEGVERKVGFADGIEITLEANPGTFEQVKFADYRRLGINRLSIGVQSFQADKLQALG 121

Query: 150 RNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H+ +EA+ A  +AR   F   + DL++ LP Q++     +L++AL+ A  HLS YQLT
Sbjct: 122 RIHDGAEAVRAADMARQAGFDNFNLDLMHGLPGQSLDDALADLRQALALAPTHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +E  T+F+         LP +++  D+    Q++  AHG   YE S ++  G  + HNLN
Sbjct: 182 MEPNTVFWSQPP----ELPEDDILWDIQEAGQALLDAHGYRQYETSAYARDGLRARHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YW +GD++GIG GAH+++     R+  + + + P+ +L   +        +  L +    
Sbjct: 238 YWSFGDFLGIGAGAHAKLSAPDGRIVRTWKTRLPKDYLNPQKAFQ---AGERPLEAADLP 294

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
            EF+M  LRL +G+    +    G+ L    +     +  G +       LR ++RG   
Sbjct: 295 FEFMMNVLRLVDGVPAALYPQRTGQPLAAIADACAAARDAGLLA-DDPQHLRPSERGQLF 353

Query: 386 LDSVIANLA 394
           L+ ++ +  
Sbjct: 354 LNDLLQHFL 362


>gi|117923370|ref|YP_863987.1| coproporphyrinogen III oxidase anaerobic [Magnetococcus sp. MC-1]
 gi|117607126|gb|ABK42581.1| coproporphyrinogen III oxidase, anaerobic [Magnetococcus sp. MC-1]
          Length = 390

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 138/384 (35%), Positives = 210/384 (54%), Gaps = 9/384 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIF 75
            L +Y+H P+CV KCPYCDF+S V   +V QE ++ + L E+   R+      R + SIF
Sbjct: 5   PLSLYLHIPYCVHKCPYCDFHSRV-EVQVPQERYVDALLMELGMWRRRFSQDARPLQSIF 63

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +P  I  ++ GI   W + S  E+T+E NP S+      GY +AG+ R+S+
Sbjct: 64  LGGGTPSLFDPPQIGRLMAGIGAIWPLESGCEVTMEGNPESLTQGRLAGYGEAGITRMSV 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+L+E  LR L R H+ ++A+  +  LA+  F   S D I+A P  T+  W  EL   
Sbjct: 124 GVQALDEGRLRQLQRPHDRAQALQGLGWLAQAGFSSWSADFIFATPGHTVAGWLEELAEV 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L++A  HLS Y LT+E GT F++  + G+ ++  E   + L   T    +A GL +YEIS
Sbjct: 184 LAFAPPHLSCYGLTVEPGTPFFQRQQGGEALVADEERQLALLEATYERLTAAGLPSYEIS 243

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS-IEKHPESWLKMVRKNGH 313
           N +  G    HN+NYWR+GDY+G+G  AH +       V  S        ++  V     
Sbjct: 244 NFARAGHGCRHNVNYWRFGDYLGVGVAAHGKWSDADGVVWRSANLADAARYMACVEAGRS 303

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
             V  + L+ ++  +E L+MGLR+ EG+S   ++ + G +L       L   +RQG + +
Sbjct: 304 PWVRDQRLTPQEAGNEALVMGLRMGEGMSKATYQWVRGVSLQQSVGDGLAWFERQGMLAQ 363

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
              + +  T RG+ + D V+A L 
Sbjct: 364 -SATHVWLTPRGLRLADGVMAELM 386


>gi|295130473|ref|YP_003581136.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK137]
 gi|291376268|gb|ADE00123.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes SK137]
          Length = 393

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 121/392 (30%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDF+++V           ++ +   E++      G     
Sbjct: 14  ADGPWSIYLHVPFCASRCGYCDFSTYVLSAMGDDAVAGYLDAAHQELELAADALGDAQPP 73

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 74  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 133

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 134 NRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRH 193

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 194 SLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 253

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 254 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 309

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 310 NVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 362

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 363 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 393


>gi|54023388|ref|YP_117630.1| coproporphyrinogen III oxidase [Nocardia farcinica IFM 10152]
 gi|54014896|dbj|BAD56266.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nocardia farcinica IFM 10152]
          Length = 424

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 124/399 (31%), Positives = 187/399 (46%), Gaps = 20/399 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWM 62
           A    +   G    G+YVH PFC  +C YCDFN++           ++++ +   E+   
Sbjct: 35  ADAPALRDFGGGPFGIYVHVPFCATRCGYCDFNTYTAGELGTSASPQSWLAALRGELATA 94

Query: 63  RQLTGP-----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                        ++++F GGGTPSL+  + +A +LD +  N+TV+++ EIT E+NP S 
Sbjct: 95  AAQFARLPSPVPPVATVFVGGGTPSLLGGEGLAEVLDAVRANFTVAADAEITTESNPEST 154

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLI 176
               F+  R+AG  RISLG+QS  +  L  L R H       AA       F  ++ DLI
Sbjct: 155 SPRFFERLREAGYTRISLGMQSAAQHVLAVLDRTHTPGRAVAAAREARAAGFEHVNLDLI 214

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P +T    +  L   L+  VDH+S Y L +E GT   +  + G+L  P E+V    Y
Sbjct: 215 YGTPGETDADLDATLDAVLAAGVDHVSAYSLIVEDGTALARRVRRGELPAPDEDVLAARY 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
                  +A GL  YE+SN +    A   HNL YW  GD++G GPGAHS +      V  
Sbjct: 275 ERIDRRLTAAGLAWYEVSNWAATESARCRHNLGYWDGGDWLGAGPGAHSHLGG----VRW 330

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              KHP  + + V + G      E L+ +++  E +M+ +RLR G+ + D          
Sbjct: 331 WNVKHPARYAERVARGGLPAAGWEALTDDERYLERVMLTVRLRTGLPLAD-----LAPAA 385

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                 +   G   R   + L  T RG  + D+V+  L 
Sbjct: 386 APALDRVVADGLATRT-PTHLVLTDRGRLLADAVVRRLV 423


>gi|168179393|ref|ZP_02614057.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum NCTC 2916]
 gi|182669638|gb|EDT81614.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum NCTC 2916]
          Length = 380

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGTFTEKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 TVVDLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LNQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ +++ ++  +
Sbjct: 356 EKKN-RIYLSKEAVSISNTIFSDFLL 380


>gi|319400919|gb|EFV89138.1| oxygen-independent coproporphyrinogen III oxidase 1 [Staphylococcus
           epidermidis FRI909]
          Length = 374

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 109/380 (28%), Positives = 197/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC + C YCDFN +    K   + ++ + + EM    Q+   R++ +++ GGG
Sbjct: 5   SAYIHIPFCYRICTYCDFNKYFI-DKQPVDEYLDALINEM----QVDNNRNLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I + +T+S   E ++EANP  +        ++ GVNRIS+GVQ+
Sbjct: 60  TPTALNMRQLEKLLKAINQTFTISG--EFSVEANPDELTYEKVVLLKQYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA++  
Sbjct: 118 FKPELLKILGRTHKTEDIYNAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAIALD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN S 
Sbjct: 178 IDHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYQFLMDRMKNSSFHQYEISNFSK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           L  ES HN  YW   +Y G G GA   V    +     +      ++K + +    ++ +
Sbjct: 238 LNHESNHNKVYWLNEEYYGFGAGASGYVNGVRYTNLNPVN----HYIKAINEGKKPILSE 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              +  ++ +E + +GLR+ +G+S   ++    + +D    E  ++L+ +G I+  +   
Sbjct: 294 TSPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFGETIKDLRCRGLIKE-EREF 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|94990391|ref|YP_598491.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS10270]
 gi|94543899|gb|ABF33947.1| Coproporphyrinogen oxidase (NAD) [Streptococcus pyogenes MGAS10270]
          Length = 408

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 202/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 34  SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFESY----DIHDLKTL 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 89  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKITVLQRSAVNRIS 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I   +   F  +S DLIYALP QT+ Q +  + +
Sbjct: 149 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLDQVKENVAK 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 209 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 268

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 269 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 323

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 324 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGVSFEERYGNIARELQNQGLLVK 383

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 384 -DDAFVRMTKKGLFLGDSVAERFIL 407


>gi|206900946|ref|YP_002250831.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dictyoglomus thermophilum H-6-12]
 gi|206740049|gb|ACI19107.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dictyoglomus thermophilum H-6-12]
          Length = 377

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 202/385 (52%), Gaps = 13/385 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             S  +G+Y+H PFCVKKCPYCDF S        +  +++  L E+           + +
Sbjct: 2   SSSKPIGIYLHIPFCVKKCPYCDFVSFSYSEDE-EGRYVEYLLKEIDMKSN---NELVDT 57

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS++   ++  ILD I K + +S +VEI++E NP +V     + +++  VNRI
Sbjct: 58  IYLGGGTPSILSLCSLEKILDFIYKRFEISKDVEISMEVNPGTVNKEKVRAWKELSVNRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G QS  E+ L+ LGR HN  +     ++ R   F  ++ D+IYALP Q    +   L+
Sbjct: 118 SIGAQSFLEKELKLLGRIHNVKDIYTTFNILREAGFDNINIDIIYALPFQRKEDFCFSLK 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L    +H+S+Y L IE+ T FY+M+   ++ LP  ++  ++++        +G   YE
Sbjct: 178 ETLKLEPEHISIYNLIIEEDTPFYEMYLKSEIELPENDLEAEMFSFAMDFLKGNGFIHYE 237

Query: 253 ISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           ISN S   G +  HNL YW    Y G G  A+S      +       KH   + + +++ 
Sbjct: 238 ISNFSKGEGYKCRHNLKYWYQEKYYGFGVSAYSYDPPMRYGNH----KHLYVYYEKIKEG 293

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
              + EKEFL  E  A ++L + LRL EG++ +++E   G+ ++  ++       +G I+
Sbjct: 294 KLPIEEKEFLIGEDLAKDYLFLRLRLLEGVAREEFESRFGKKIEYFMKNYPIFVEEGLIK 353

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             +  R+  T++G+ + + +  ++ 
Sbjct: 354 E-ENGRIFLTEKGVLLANEIFQDIL 377


>gi|313772380|gb|EFS38346.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL074PA1]
 gi|313809899|gb|EFS47620.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL083PA1]
 gi|313830229|gb|EFS67943.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL007PA1]
 gi|313834030|gb|EFS71744.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL056PA1]
 gi|314973236|gb|EFT17332.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL053PA1]
 gi|314975911|gb|EFT20006.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL045PA1]
 gi|314984072|gb|EFT28164.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL005PA1]
 gi|315080773|gb|EFT52749.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL078PA1]
 gi|315096147|gb|EFT68123.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL038PA1]
 gi|327326065|gb|EGE67855.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL096PA2]
 gi|327446053|gb|EGE92707.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL043PA2]
 gi|327447967|gb|EGE94621.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL043PA1]
 gi|328760434|gb|EGF74002.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL099PA1]
          Length = 397

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 121/392 (30%), Positives = 189/392 (48%), Gaps = 23/392 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR--S 70
                 +Y+H PFC  +C YCDF+++V           ++ +   E++      G     
Sbjct: 18  ADGPWSIYLHVPFCASRCGYCDFSTYVLSAMGDDAVAGYLDAAHQELELAADALGDAQPP 77

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+IFFGGGTP+++ P  +  ++D I   W +  + E+T EANP ++ V    G  KAG+
Sbjct: 78  VSTIFFGGGTPTMLSPVQLGELIDHIRTLWGIDPDAEVTTEANPETLSVEVLAGLLKAGI 137

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +E  L  L R H    A+    LAR   F  +S DLI+  P +    W  
Sbjct: 138 NRLSMGMQSADEYVLTVLDRRHRPGRAVEMAQLARQVGFDDVSLDLIFGAPGENFDSWRH 197

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   L+   DH+S Y L +E+GT      + G+L +  E+   D Y LT+ I +  G  
Sbjct: 198 SLDVTLTAEPDHISAYSLIVEEGTRLAGRIRRGELPMTDEDDLADKYLLTEKILTEAGYV 257

Query: 250 AYEISNHSFL----GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            YE+SN +           HN+ YW   D+ GIGPGAHS V            KHP ++ 
Sbjct: 258 NYEVSNWARPRSGRDHRCRHNMAYWLGYDWWGIGPGAHSHVAGTR----WWNVKHPATYR 313

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
            ++      V + E L   Q+ +E +++ LRL +G+ + D         ++EC R   + 
Sbjct: 314 NVLGDRVLPVDDYEVLGDVQRHEETVLLRLRLADGLPMADLS-------EVECMRATEVV 366

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            QG    ++  RL     G  + D +I +L V
Sbjct: 367 EQGL-GTMEEGRLVLNLSGRMVADRIITDLLV 397


>gi|319892641|ref|YP_004149516.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent, in heat shock gene cluster
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162337|gb|ADV05880.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent, in heat shock gene cluster
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323464321|gb|ADX76474.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           pseudintermedius ED99]
          Length = 373

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 190/379 (50%), Gaps = 16/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCVK C YCDFN +  + +   + ++   + EM+  +       + ++F GGG
Sbjct: 5   SAYIHIPFCVKICTYCDFNKYFIQNQ-PVDLYLACLVEEMKQSKA----SQLETLFVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   + +    E T EANP  +        ++ GVNR+SLGVQ+
Sbjct: 60  TPTALSESQLEYLLQAIQDQFDIKG--EYTFEANPDELTEEKVALLKRYGVNRLSLGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ LGR+H+ ++   AI  AR      +S DL+Y LP Q+M Q++  L+ AL   
Sbjct: 118 FDDTLLQTLGRSHHKADIYQAIDNARRQGISSISLDLMYHLPGQSMQQFQESLEEALRLD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DHLS Y L +E  T FY  ++ G L +P+E+V  ++Y    +      L  YEISN + 
Sbjct: 178 IDHLSSYGLILEPQTQFYNQYRKGKLKMPNEDVGAEMYQYLMNRMKNSPLQQYEISNFAK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HN  YW+   Y G G GA   +    +     +      ++K ++++    + +
Sbjct: 238 KGHESIHNQVYWKNESYYGFGAGASGYIGGVRYTNVNPVN----HYIKKIQQHEFPRLTE 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSR 375
              + ++Q +E + +GLR+  G+    ++    + ++    +    L+ Q  I++   + 
Sbjct: 294 TTPTVKEQIEEEMFLGLRMNTGVDKIKFQKKYHQTIEAIYAKEIISLEGQNLIDQTD-TH 352

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T +G  + ++V     
Sbjct: 353 IALTDKGRIVGNTVFEAFI 371


>gi|126436063|ref|YP_001071754.1| coproporphyrinogen III oxidase [Mycobacterium sp. JLS]
 gi|126235863|gb|ABN99263.1| coproporphyrinogen III oxidase, anaerobic [Mycobacterium sp. JLS]
          Length = 392

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 174/389 (44%), Gaps = 14/389 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG- 67
           +        G+Y+H PFC  +C YCDFN++      G   E ++ +   E+    +  G 
Sbjct: 13  LAATAGRPFGLYIHVPFCATRCGYCDFNTYTPAEAGGANPEGWLVAMRQELALAARTLGT 72

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  + ++F GGGTPSL+    +  +L  + +++ ++   E+T EANP S     F     
Sbjct: 73  PPPVRTVFVGGGTPSLLGGAGLTAVLAAVREHFELAPGAEVTTEANPESSGPELFDALLA 132

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
           AG  R+SLG+QS     L+ L R H+   A+AA   AR      ++ DLIY  P +T   
Sbjct: 133 AGYTRVSLGMQSTARHVLKVLDRLHSPGRAVAAAGEARAAGFGHVNLDLIYGTPGETDDD 192

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  A+   VDH+S Y L +E GT   +  + G++  P ++V    Y L  +     
Sbjct: 193 LRRSADAAIGAGVDHVSAYALVVEDGTALARRVRRGEVTAPDDDVLAARYELLDARLGEA 252

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE+SN +  G E  HNL YW  G++ G+GPGAH  +            +HP ++  
Sbjct: 253 GFDWYEVSNWARFGGECRHNLGYWAGGEWWGVGPGAHGFLGDTR----WWNVRHPNAYAT 308

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +      V + E L    +  E +M+ +RLR G+ +          +       L    
Sbjct: 309 ALGDGALPVSDFEVLDPAARHTEDVMLRVRLRSGLPLDMLTADERSRVGTVVADGLA--- 365

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               V  + L  T RG  + D V+  L  
Sbjct: 366 ---VVDGAALVLTDRGRLLADGVVRTLLA 391


>gi|119025765|ref|YP_909610.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765349|dbj|BAF39528.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium adolescentis ATCC 15703]
          Length = 387

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 186/384 (48%), Gaps = 15/384 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           +Y+H PFC+++C YCDFN++          + N+    + EM  +R            ++
Sbjct: 5   IYIHVPFCLRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMAIVRDWQTTHGINEPKVA 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+ ++  ++  +LD +   W ++ + EIT EANP +V  +  +     G NR
Sbjct: 65  TVFFGGGTPTTLKASDLVAMLDAVRATWGIADDAEITTEANPDTVNADYVKELADGGFNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L  L R H      A I  A     R S DLIY  P +++  W   ++
Sbjct: 125 ISFGMQSAVPHVLATLDRTHTPENVAAGIAAANAAGMRSSVDLIYGAPGESLDDWRTSVR 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LTI   T   +    G L  P ++   + Y +  ++ +  GL  YE
Sbjct: 185 TAIDLGVNHISAYALTIAPNTKMGRRIAAGTLSRPDDDDEANKYEIADTMFTEAGLEWYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRK 310
           ISN +  G ES HNL YWR  D+ G+GPGAHS          +      HP  W   + +
Sbjct: 245 ISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGDCEDGKGLRSWDIAHPRLWGTAINE 304

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                   E +++++  +E +M+GLR+REG+  + +  L    +  +    L+  G I  
Sbjct: 305 GNVPWAGSERITADEDIEETIMLGLRIREGLDTRQFSHL----IPEQKWIELEHDGLITM 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +   R   T RG  + D++I  L 
Sbjct: 361 LD-GRAIPTLRGRLLNDTIITELL 383


>gi|255656448|ref|ZP_05401857.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-23m63]
 gi|296450106|ref|ZP_06891868.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP08]
 gi|296878487|ref|ZP_06902493.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP07]
 gi|296261114|gb|EFH07947.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP08]
 gi|296430571|gb|EFH16412.1| possible coproporphyrinogen dehydrogenase [Clostridium difficile
           NAP07]
          Length = 391

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 122/395 (30%), Positives = 199/395 (50%), Gaps = 25/395 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------------- 64
           LG+YVH PFCVKKC YCDFNS+     + +  +I+    EM+                  
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDLKK-RYIEDLKIEMELYSNKLYKDNKYKNKECC 60

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   +
Sbjct: 61  SLNKNDKITSIFVGGGTPSILTSDEIREVFMSIKEMFYIDDNAEITIECNPGTLTLEKLK 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             +  G+NR+S+G+Q+++E+ L F+GR H   E       A +  F  ++ DL+Y+LP Q
Sbjct: 121 TMKDIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINIDLMYSLPNQ 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  W+  L++ +     H+S Y L +E+GT  Y M++     L  EN+ +++Y  T + 
Sbjct: 181 TLCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENIDIEMYEYTINY 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S     E
Sbjct: 241 LMSKGYNQYEISNYSKEGFNCKHNILYWECKPYIGIGAGASGYINENRYNNVES----LE 296

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            +   + K    + E E LS +   +E + MGLR+ +GI  +D++   G +   +  + +
Sbjct: 297 DYHLSLVKREKPIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFGIDFKDKYSKQI 356

Query: 363 Q---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +    +  I +  F  ++ TQ+G  + +SV     
Sbjct: 357 EMLSARKLINQ-SFEGIQLTQKGREISNSVFIEFM 390


>gi|149927824|ref|ZP_01916075.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Limnobacter sp. MED105]
 gi|149823446|gb|EDM82677.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Limnobacter sp. MED105]
          Length = 436

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 129/413 (31%), Positives = 211/413 (51%), Gaps = 33/413 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------------------- 49
           + +       L +Y+H P+CV+KCPYCDFNSH+      +E                   
Sbjct: 30  SELRFAAMPPLALYIHLPWCVRKCPYCDFNSHLAPESKLREVGVPLVASGEQGFAESLPL 89

Query: 50  ----NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
                ++ + + ++         R + SIF GGGTPSL  P+ I  +L  +     +  +
Sbjct: 90  DLQRRYLNALIADLDQQLPKIWGRKLYSIFIGGGTPSLFAPELIDELLGAVRARLGMPQS 149

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            EIT+EANP + E   F+G+RKAGVNR+S+GVQS  +  L+ LGR HN+ +A+AA+  A 
Sbjct: 150 GEITMEANPGTFEQARFEGFRKAGVNRLSIGVQSFSDSHLKALGRVHNSHQALAAVSSAV 209

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            +F  ++ DL+YALP Q + Q   ++ +A++    HLSLYQLT+E  TLF          
Sbjct: 210 ALFEEVNIDLMYALPNQNVEQALADVAQAVALNSTHLSLYQLTMEPNTLFAAKPP----P 265

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
           LP ++  +D+         + G   YEIS  +  G    HNLNYW +GDY+GIG GAH++
Sbjct: 266 LPDDDTLIDIEEAVHKAAKSAGFEQYEISAFAKPGHRCQHNLNYWGFGDYLGIGAGAHAK 325

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +   +     +  ++P ++++ +      + E   L+ ++   EF++  LRL +G+    
Sbjct: 326 ISYPNRIERETRHRNPMAYMEEMEGAAQPL-EVRTLAVKELPFEFMLNALRLIDGVPESW 384

Query: 346 WEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +    GR L  + ++ L++   +G IE  Q    + T+ G   L+ +      
Sbjct: 385 FVERCGRPLS-DLQKPLKQALTKGLIE-TQPGLFKPTELGFRFLNDLQEMFLA 435


>gi|224476691|ref|YP_002634297.1| coproporphyrinogen III oxidase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421298|emb|CAL28112.1| putative oxygen-independent coproporphyrinogen oxidase III
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 373

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 198/380 (52%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++   + E+         + ++++F GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLNCLIKELSQ----PNKKELNTMFVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  Q +  +L  I  N+ + +  E T EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 60  TPTALSTQQLEKLLKAINDNYIIKN--EYTFEANPDELTNEKVQLLKDYGVNRLSMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ LGR HN ++   A++LA       +S DL+Y LP QT+ Q+E  L  ALS  
Sbjct: 118 FDQSLLKILGRTHNTNDIYQAVNLANKFDINSISLDLMYHLPGQTIHQFEESLDIALSMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E  T FY M++ G L LP+E++  ++Y+L         +H YEISN S 
Sbjct: 178 INHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGEEMYDLLLDKIQNSNMHQYEISNFSQ 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +  ES HN  YW+   Y G G GA   V    +     +      ++K ++     +++ 
Sbjct: 238 VNHESEHNKVYWKNEYYYGFGAGASGYVDGVRYSNVNPVN----HYIKKIKNGEKPILQS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
              + ++Q +E + +GLR+ +G+S K +E    + LD        +L  +G IE  +   
Sbjct: 294 TIPNFKEQIEEQMFLGLRMNKGVSKKTFENRFDKRLDDIYSNELNDLISKGLIE-DKGEY 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           ++ T+RG  + + V     +
Sbjct: 353 VKLTERGKVIGNEVFEAFLI 372


>gi|295092936|emb|CBK82027.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Coprococcus sp. ART55/1]
          Length = 432

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 122/414 (29%), Positives = 211/414 (50%), Gaps = 28/414 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV------RRYKVGQENFIQSFLTEMQW 61
           +  +       L +Y+H PFCVKKC YCDF S          Y V +E +I++   E++ 
Sbjct: 20  DEVLESYEKKPLSIYIHIPFCVKKCAYCDFLSFPVGAACMSGYGVYREKYIEALCEELKS 79

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L     + +I+ GGGTPS++EP  I L++  + K + V+ + EI+IE NP ++    
Sbjct: 80  YSYLAETHKVRTIYIGGGTPSILEPDEITLVMTTVRKLFDVAEDAEISIEVNPGTLTSRK 139

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
              Y   G+NR+S+G+QS ++  L  LGR HN  + +AA  +AR   F  ++ DL+  +P
Sbjct: 140 AAEYIANGINRMSIGLQSAQKNELEALGRIHNYDQFLAAFDMAREAGFRNINIDLMSDIP 199

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QTM  +   L + L    +H+S Y L +E GT            +P E+V   +Y++T 
Sbjct: 200 GQTMRSYLDTLDKVLRCKPEHISSYSLIVEDGTPLAADENLLS-QIPDEDVDRQMYDITN 258

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            +    G H YEISN++  G E  HN+ YW  G+YIGIG GA S +    +    S+E +
Sbjct: 259 KLLGTGGYHRYEISNYAKAGYECRHNIVYWTLGEYIGIGIGAASFLYGRRYTNTSSLEDY 318

Query: 301 PE---------SWLKMVRKNGHA--VVE-----KEFLSSEQQADEFLMMGLRLREGISVK 344
            +         ++   V  +G A  ++E     +E L +++  +E++ +GLR+  G+S +
Sbjct: 319 IDGMARHRELMTFGDHVANSGKARDIIEHMRNVEEELDADRLMEEYMFLGLRMISGVSAE 378

Query: 345 DWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +    G ++           +  G +E      +R T++G+ + ++++A+  +
Sbjct: 379 KFNDYFGHSIYDIYGSVIDKYKSTGHLE-DDHGLIRLTKKGIDVSNTILADFLI 431


>gi|212691062|ref|ZP_03299190.1| hypothetical protein BACDOR_00552 [Bacteroides dorei DSM 17855]
 gi|212666294|gb|EEB26866.1| hypothetical protein BACDOR_00552 [Bacteroides dorei DSM 17855]
          Length = 376

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 195/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R+ +  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTRKEQ--KTAYIRALCHELTNRKDYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A        F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E+++V L+       +  G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTAGYEHYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E 
Sbjct: 241 PGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L    + ++F++  +R + G+ +       G  L   C R      +QG +E ++   
Sbjct: 296 EELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLRMATPHLQQGTLE-IKNDT 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D +++++ 
Sbjct: 355 LKLTRKGVFISDGIMSDML 373


>gi|19746022|ref|NP_607158.1| coproporphyrinogen III oxidase [Streptococcus pyogenes MGAS8232]
 gi|19748188|gb|AAL97657.1| putative coproporphyrinogen III oxidase [Streptococcus pyogenes
           MGAS8232]
          Length = 376

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 120/385 (31%), Positives = 203/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLKALIQEFESY----DIHDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  + +  +L+ + +N  +    E TIEANP  +        +++ VNRIS
Sbjct: 57  YIGGGTPTAITAKQLEYLLNHLERNLNLDDLEEFTIEANPGDLTPEKIAVLQRSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLDQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++   G + +       R LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFGISFEECYGNIVRELQNQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|298492589|ref|YP_003722766.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
 gi|298234507|gb|ADI65643.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
          Length = 401

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 133/393 (33%), Positives = 208/393 (52%), Gaps = 27/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-------------ENFIQSFLTEMQWMRQLT 66
             YVH PFC ++C YCDF   V     G+               ++ +   E+      +
Sbjct: 13  AAYVHIPFCRRRCFYCDFPVFVVGDTYGEPSYRSQGKTSGTISQYVDALCHEISISLAFS 72

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P  +++IFFGGGTPSL+  + +  IL  + K + +++ VEI++E +P + ++    GY 
Sbjct: 73  QP--VTTIFFGGGTPSLLSTEQLQCILTALEKRFGIAAGVEISMEMDPGTYDLAQIAGYC 130

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             GVNR+SLGVQ+ +++ L   GR+H+ ++  AAI L   +  P+ S DLI  LP Q++ 
Sbjct: 131 STGVNRVSLGVQAFQDELLTVAGRSHSVNDIFAAIDLINQVEIPQFSLDLISGLPHQSLV 190

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           QWE  L +A+  A  H+S+Y LTIE GT F + +K GD  LP++   V +Y L Q + + 
Sbjct: 191 QWEDSLTKAVEVAPTHISIYDLTIEPGTAFGRYYKPGDNPLPTDETTVTMYQLGQKVLTG 250

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN++  G +  HN  YW    Y G G GA S V    H    +  +  + + 
Sbjct: 251 AGYEHYEISNYAKSGHQCKHNRVYWENRSYYGFGMGAASYV----HGKRFTRPRKTKEYY 306

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ-- 363
           + ++    A+++ E    E +  E LM+GLRL EG+S+       G+    E  + LQ  
Sbjct: 307 EWLQNG--ALIDCEVTPLEDELLETLMLGLRLAEGLSLTVLVEKFGKEKVEEITQCLQPY 364

Query: 364 -RQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
            +QG++E V+  RLR T   G    + V+A+L 
Sbjct: 365 FKQGWVEVVE-ERLRLTDPDGFLFSNMVLAHLF 396


>gi|153936410|ref|YP_001388691.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. Hall]
 gi|152932324|gb|ABS37823.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum A str. Hall]
          Length = 380

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 14/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +  + +Y+H PFC++KC YCDF S+ ++  +  E ++++   E+      T  + I +
Sbjct: 5   DKNKEVSLYIHIPFCMQKCSYCDFTSYSKKEDLMME-YVKALSKEI---VNNTKNKIIKT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTP+ +  + +  IL    K      N+E T+E NP +      +  +  GVNR+
Sbjct: 61  IFIGGGTPTYLSLEALN-ILKNTLKTIDKKENIEFTVEGNPGAFTEKKLKLLKSMGVNRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS +   L+ LGR H+  +   +  +AR   F  ++ DL++ALP Q++  W+  L 
Sbjct: 120 SIGLQSSKNSLLKTLGRIHSFEDFAHSFKMARKEGFNNINVDLMFALPNQSLDDWKETLL 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  + +HLS Y L IE+GT FY ++K+  L LP E    ++Y          G   YE
Sbjct: 180 TVVGLSPEHLSCYSLIIEEGTNFYNLYKNSLLKLPKEEEEREMYEYCIDFLKERGYLQYE 239

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +    E  HNL YW   DYIG G GAHS V    +    SI    E+++K +  N 
Sbjct: 240 ISNFANPNKECRHNLVYWDLEDYIGCGVGAHSYVNNQRYENTSSI----ETYIKEINSNN 295

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIE 369
              +     S ++  +EF+ MGLR  +GI + D++   G+N   +        ++   + 
Sbjct: 296 LTQINFHINSQKENMEEFMFMGLRKTKGICIDDFQGRFGKNIIHIYGSVINKYKKLNLLI 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  R+  ++  +++ +++ ++  +
Sbjct: 356 EKEN-RIYLSKEAVSISNTIFSDFLL 380


>gi|242242858|ref|ZP_04797303.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           W23144]
 gi|242233700|gb|EES36012.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           W23144]
          Length = 374

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 109/380 (28%), Positives = 196/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC + C YCDFN +    K   + ++ + + EM    Q+   R++ +++ GGG
Sbjct: 5   SAYIHIPFCYRICTYCDFNKYFI-DKQPVDEYLDALINEM----QVDNNRNLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I + +T+S   E + EANP  +        ++ GVNRIS+GVQ+
Sbjct: 60  TPTALNMRQLEKLLKAINQTFTISG--EFSFEANPDELTYEKVVLLKQYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ LGR H   +   A+  AR      +S DL+Y LP+QT+  ++  L+RA++  
Sbjct: 118 FKPELLKILGRTHKTEDIYNAVSHARKAGIESISLDLMYHLPQQTIDDFKDSLERAIALD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY +++ G L LP+E++  ++Y            H YEISN S 
Sbjct: 178 IDHISSYGLILEPKTQFYNLYRKGHLKLPNEDLGAEMYQFLMDRMKNSSFHQYEISNFSK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           L  ES HN  YW   +Y G G GA   V    +     +      ++K + +    ++ +
Sbjct: 238 LNHESNHNKVYWLNEEYYGFGAGASGYVNGVRYTNLNPVN----HYIKAINEGKKPILSE 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              +  ++ +E + +GLR+ +G+S   ++    + +D    E  ++L+ +G I+  +   
Sbjct: 294 TSPTYNERMEEEMFLGLRMNQGVSKSRFKKKFNKLIDEVFGETIKDLRCRGLIKE-EREF 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|154509298|ref|ZP_02044940.1| hypothetical protein ACTODO_01823 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798932|gb|EDN81352.1| hypothetical protein ACTODO_01823 [Actinomyces odontolyticus ATCC
           17982]
          Length = 438

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 120/414 (28%), Positives = 176/414 (42%), Gaps = 37/414 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGP--- 68
           +    L +YVH PFC  +C YCDFN++   +  G +  ++  S L E     ++      
Sbjct: 27  EARRPLSLYVHVPFCRVRCGYCDFNTYTVGFGPGAQVGDYAPSVLAEASLAARVMAESGL 86

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R   ++FFGGGTP++++   +A IL G+ +   ++   E+T+EANP +V         
Sbjct: 87  PVREAETVFFGGGTPTMLDTAELAEILTGLRERIGIAPGAEVTLEANPDTVTRQGLVQLA 146

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG  R+S G+QS     L+ L R H        +  A+      S DLIY  P ++   
Sbjct: 147 DAGFTRVSFGMQSAVPAILKTLDRTHTPERVPLVVQWAKEAGLSTSVDLIYGTPGESFAD 206

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           WE  L+ ALSY  DH+S Y L +E GT        G+L  P  +     Y L   + S  
Sbjct: 207 WETSLRAALSYETDHISAYALVVEGGTKMGGQVARGELPTPDPDDEAAKYELADVLLSEA 266

Query: 247 GLHAYEISNHSFL--------------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
           G   YEISN +                   S HNL YWR  D+ G+GPGAHS V      
Sbjct: 267 GYAWYEISNFARTTDADLTSGRPSTFYAHASAHNLAYWRDWDWWGLGPGAHSHVG----C 322

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW------ 346
           +     K+P ++   +R         E L  + +  E +M+G+R  EGI +         
Sbjct: 323 MRWWNVKNPAAYAARLRDGRSPAYAGEILDEDTRELERVMLGVRTSEGIELAGLPGTRQA 382

Query: 347 ----EMLAGRNLDIECERNLQRQGFIERVQ--FSRLRCTQRGMTMLDSVIANLA 394
                 L    +       L   G I+       R+  T RG  + D V   L 
Sbjct: 383 DEAGAALGAGAVSGGRVAALIADGLIDGAAALGGRVILTLRGRLLADYVTRELM 436


>gi|268316499|ref|YP_003290218.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
 gi|262334033|gb|ACY47830.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
          Length = 383

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 200/383 (52%), Gaps = 10/383 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFGG 78
           G+Y+H PFC ++C YCDF     +       F+Q+  TE+++  QL G    I +I+FGG
Sbjct: 3   GIYLHIPFCKQRCIYCDFYFVTGQRLHP--TFVQALCTEIEYYGQLYGRLEPIETIYFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +A +L+ + + + +S+  E+T E NP     +   G    G+NR+S+GVQ
Sbjct: 61  GTPSRLSLEEVARVLNELYRYFDLSALQEVTFEVNPEDASRDYLSGLHSLGINRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  LRF+ R H A +A AAI  AR   F   + DLI+ LP Q +  W   LQ+    
Sbjct: 121 SFYEADLRFMNRAHTAEQAEAAIENARRAGFENFNVDLIFGLPDQPLEYWMANLQKVADR 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y LTIE  T+ YK  + G +    E      Y+       A G   YEISN +
Sbjct: 181 DIPHVSTYSLTIEPRTVLYKQVERGLVQPADEETYRACYDFAMEYLEARGYEHYEISNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS---HRVAISIEKHPESWLKMVRKNGHA 314
             G +S HN  YWR+G+Y+G GP AHS              +  ++   +  ++ ++   
Sbjct: 241 RPGYQSRHNHTYWRHGNYLGFGPSAHSFWWGQLPEPGAYRWANVRNLRRYEALLAQHHLP 300

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERV 371
           +  +E LS +Q A+E+L + LR  EG+ +  +    G +L  E       L+ +G IE +
Sbjct: 301 LEFREGLSYDQLAEEYLYLRLRTAEGLDLDHYAERYGVDLLSERLDELAELEAEGLIEPI 360

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +  +LR +++G  + D+++A L 
Sbjct: 361 RNGKLRLSRKGRHVCDAIVARLL 383


>gi|296120959|ref|YP_003628737.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           limnophilus DSM 3776]
 gi|296013299|gb|ADG66538.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           limnophilus DSM 3776]
          Length = 380

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 116/378 (30%), Positives = 178/378 (47%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC  +C YCDF + V         ++ +   EMQ       P  + ++FFGGG
Sbjct: 12  SVYIHVPFCRHRCGYCDF-TLVAGRDDLIPRYLAALEREMQ---AHDQPLVVQTVFFGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  + + + ++   E +IEANP  +          AG NR+SLGVQS
Sbjct: 68  TPTHLPIVELEQLLKMVTRRFPLADGGEFSIEANPLDMTEEVIDVLHSAGCNRVSLGVQS 127

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + + L+ L R+H   E    +   R   P +S DLI+ +P QT+  WE +L++AL+   
Sbjct: 128 FQNKHLQTLERDHQGGEIPEIVQRIRARIPNVSLDLIFGVPGQTLVDWEYDLEQALACGP 187

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLS Y LT E+GT F    + G L    E +  ++Y L        G   YE+SN +  
Sbjct: 188 THLSTYGLTFEEGTAFTTRKRRGQLTEIDEALEREMYALAIKRLQEEGFEHYELSNFARP 247

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G +  HNL YW    Y   GPGA S ++        S+      +L  + +    + E E
Sbjct: 248 GYQCQHNLAYWNGSPYAAFGPGAASYLQGTRRTNTRSVL----GYLSRMEQGASVIAEAE 303

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRL 376
            L  E    E L +GLR   G+   +++   G +L     E  + L RQG +      R+
Sbjct: 304 TLEKEHAMREALYVGLRRLSGMDYAEFQHRFGIDLQEFAAETIQRLVRQGLLA-ADEKRI 362

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T  G+ + + V+A   
Sbjct: 363 RLTSEGIFLANRVMAEFL 380


>gi|254448540|ref|ZP_05062000.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
 gi|198261923|gb|EDY86208.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
          Length = 400

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 133/405 (32%), Positives = 211/405 (52%), Gaps = 19/405 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K++  +   +T      L +YVH P+CV+KCPYCDFNSH  R  + +  +I + + ++ W
Sbjct: 3   KFILWHNPAVTDFSLPPLSLYVHLPWCVRKCPYCDFNSH-ERESLPEIEYIDALIRDLDW 61

Query: 62  MRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                   PR + SIFFGGGTPSL   + I  +L  +        ++EIT+EANP + E 
Sbjct: 62  ELSQADWTPRPLHSIFFGGGTPSLFSAEAIQRLLRAVEAKLGFEEDIEITLEANPGTAEA 121

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA--------IHLARNIFPRM 171
             F GYR+AGV R+S+GVQS ++Q L+ LGR H + +A+AA             N     
Sbjct: 122 ERFTGYRQAGVTRLSIGVQSFDDQQLQKLGRIHRSEQAVAAADMARAAGFTQYHNGAHGF 181

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + DL+YALP Q + +   ++++AL+    H+S YQLT+E GT FY         LP ++ 
Sbjct: 182 NLDLMYALPGQRVEEALSDVEQALALEPSHISHYQLTLEPGTAFYYRPP----ELPDDDT 237

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
           A  +    Q   +  G   YE+S +S       HNLNYW++GDY+ IG G+H+++     
Sbjct: 238 AFAMQTACQKTLAEAGFEHYEVSAYSRPLRACRHNLNYWQFGDYLAIGAGSHAKLTSRQS 297

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               S  K P+ +L+    +  A+ E   +   Q+  EF++  LRL EG+    +E   G
Sbjct: 298 IHRRSKVKTPDKYLRYAGAHE-ALDEAAGIPESQRGFEFMLNALRLVEGVPSALFEQRTG 356

Query: 352 RNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L    +    L+ +G + +    R++ T +G+  L+ ++    
Sbjct: 357 LPLATIEKTLGPLRERGLLTQ-NARRIQPTDQGLRFLNVLMGEFL 400


>gi|241888791|ref|ZP_04776097.1| putative oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans ATCC 10379]
 gi|241864467|gb|EER68843.1| putative oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans ATCC 10379]
          Length = 377

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 201/386 (52%), Gaps = 16/386 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            S   GVY+H PFC   C YCDFN    + +   + +I   + E++ M  +   +++ +I
Sbjct: 2   KSYPRGVYIHIPFCKYICSYCDFNKFYIQRQ-PVDKYIDCLIKEIESMENI---QNVETI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +  + +  +L  +          E T EANP  +  +     +  GV+RIS
Sbjct: 58  YIGGGTPSALSDEQLHRLLTALRNKIP-QQLREFTFEANPEDLVDSRVALVKGYGVDRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+   + L+ LGR H A +   AI   +      ++ DL+++LPKQTM      +++
Sbjct: 117 MGVQTFNNELLKILGRGHVADDVDMAIANCKKHGIEDINVDLMFSLPKQTMDDLYDSMKK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              Y + H+S Y L +E+ T  Y   +D  + LPS      +YN   +  + +G   YEI
Sbjct: 177 VAEYNISHISCYSLILEQKTKLYNQVRDKKVTLPSNETEEKMYNEVINFLTENGYEQYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES+HN +YW+  +Y G+G GAH  +    +    +     + ++  + + GH
Sbjct: 237 SNFARPGHESVHNSSYWKNIEYYGLGAGAHGYIDGVRYANQGA----LKFYIDSMLEKGH 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIE 369
           A  E+  ++ +++ +E + +GLRL EG+ +  +E   G+  +       ++NL R+G++E
Sbjct: 293 ARREENTVTPKERIEEEMFLGLRLLEGVDLDIFEEKYGKRAEEIFKGVIDKNL-REGYLE 351

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
            ++ ++LR T++G+   + V +   +
Sbjct: 352 -IEGNKLRLTRKGLFYGNDVFSEFLL 376


>gi|84684652|ref|ZP_01012553.1| coproporphyrinogen III oxidase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667631|gb|EAQ14100.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2654]
          Length = 348

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 152/348 (43%), Positives = 216/348 (62%), Gaps = 3/348 (0%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
             ++  ++L E+    + T  R +SS++FGGGTPSL++P  +  +LD +A +WT ++++E
Sbjct: 1   MADWQAAYLAELARYARETPNRVLSSVYFGGGTPSLMDPAVVGAVLDAVAGHWTPANDIE 60

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANPSSVE   F GY  AGVNR+S+G Q+L +  L+ LGR H+   A+AA+ +AR+ 
Sbjct: 61  ITLEANPSSVEAERFAGYAAAGVNRVSMGFQALNDGDLKALGRLHDVETALAALDVARST 120

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-L 226
           F R++FDLIY    Q++  W  ELQRA+ +  DHLSLYQLTIE GT F      G L  L
Sbjct: 121 FDRINFDLIYGRQDQSLEDWTAELQRAVGFEPDHLSLYQLTIEDGTAFGDRFARGKLRGL 180

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E+++ D+Y  TQ I    GL AYE+SNH+  G ES HNL YW  GDYIGIGPGAH R+
Sbjct: 181 PDEDLSADMYFATQDICEDAGLLAYEVSNHAKPGQESRHNLIYWSAGDYIGIGPGAHGRL 240

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
            +G  R +   E  P  WL    K+ +    +E LS   QA E+LMMGLR   G+ +  +
Sbjct: 241 SLGGRRWSTWTELSPSKWLDQALKH-NGEAGREALSRADQAGEYLMMGLRTTRGLDLDRY 299

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           E ++G  LD    ++L + G++  +    L  T+ G  +L++VI  L 
Sbjct: 300 EAISGVPLDEMVLQDLVKNGYL-NLNNRYLAPTRSGRAVLNAVIRELL 346


>gi|265752140|ref|ZP_06087933.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_33FAA]
 gi|263236932|gb|EEZ22402.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           3_1_33FAA]
          Length = 376

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 116/379 (30%), Positives = 195/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R+ +  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTRKEQ--KTAYIRALCHELTDRKNYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A        F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E+++V L+       +  G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTAGYEHYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E 
Sbjct: 241 PGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L    + ++F++  +R + G+ +       G  L   C R      +QG +E ++   
Sbjct: 296 EELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLRMATPHLQQGTLE-IKNDT 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + + +++++ 
Sbjct: 355 LKLTRKGVFISNGIMSDML 373


>gi|73662483|ref|YP_301264.1| coproporphyrinogen III oxidase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494998|dbj|BAE18319.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 374

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 196/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    +   + ++   + EMQ+    +  + + ++F GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIHNQ-PVDEYLDCLIKEMQY----SKTKVLETVFVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I   + +    E + EANP  + +   Q  +  GVNR+S+GVQ+
Sbjct: 60  TPTALSYEQLKRLLKAITDIFEIKG--EFSFEANPDELTLEKVQLLKDFGVNRLSMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN S+   A+  AR +  P +S DL+Y LPKQT+  ++  L++AL+  
Sbjct: 118 FKPELLEILGRTHNTSDIYQAVTNARAVGIPSISLDLMYHLPKQTIDDFKDSLEKALAMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M+K G L +P+E++  ++Y           LH YEISN   
Sbjct: 178 IDHISSYGLILEPKTQFYNMYKKGKLKIPNEDIGEEMYEYLLERMQRSELHQYEISNFGK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G ES HN  YW+   Y G G GA   V    +     +      ++K ++ N   ++E 
Sbjct: 238 MGHESEHNKVYWKNEGYYGFGAGASGYVDGERYSNVNPVN----HYIKKIKNNERPLLES 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
              +  +Q +E + +GLR+ +G++   ++     ++D        +L ++  I   Q   
Sbjct: 294 TRPTKNEQMEEEMFLGLRMNQGVNKARFKEKFDLSIDEVYGTTIEDLLKRELIVDNQ-GF 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V  +  +
Sbjct: 353 ISMTERGKVIGNLVFESFLL 372


>gi|237726628|ref|ZP_04557109.1| coproporphyrinogen III oxidase [Bacteroides sp. D4]
 gi|229435154|gb|EEO45231.1| coproporphyrinogen III oxidase [Bacteroides dorei 5_1_36/D4]
          Length = 376

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 195/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R+ +  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTRKEQ--KTAYIRALCHELTDRKNYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A        F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E+++V L+       +  G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTAGYEHYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E 
Sbjct: 241 PGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L    + ++F++  +R + G+ +       G  L   C R      +QG +E ++   
Sbjct: 296 EELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLRMATPHLQQGTLE-IKNDT 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D +++++ 
Sbjct: 355 LKLTRKGVFISDGIMSDML 373


>gi|258516366|ref|YP_003192588.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257780071|gb|ACV63965.1| oxygen-independent coproporphyrinogen III oxidase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 432

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 34/404 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-------- 70
           +G+Y+H PFC++KC YCDF S+        E +  +   E+    +L    S        
Sbjct: 35  MGLYIHVPFCIRKCLYCDFISYPYEN-AAAEIYSAALQREINLYAELFRSSSQTENRKKF 93

Query: 71  ----------------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                            +S+F GGGTP+ +    +++IL  +  +  ++   E T EANP
Sbjct: 94  FDALGNYAYDEFAAPVFTSVFLGGGTPTCLPASLLSVILKTLRHSLPLAPGAEFTAEANP 153

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSF 173
            +V   N   +R+ GVNR+SLGVQ+ + Q L+ LGR H   EA+ A+ LAR   F  ++ 
Sbjct: 154 GTVNGENLALFREFGVNRLSLGVQACQPQLLKTLGRIHTFQEALQAVKLARRQGFDNINL 213

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLI+ +P QTM  W+  L++ +     HLSLY L +E+GT   K    G +   +E   +
Sbjct: 214 DLIFGIPGQTMQGWQTCLEQIIDLNPQHLSLYGLQLEEGTPLEKSVTLGHIEPCTEEAEL 273

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
            +Y    +     G   YEISN +       HN+ YW++G+Y+GIGPGAHS +     ++
Sbjct: 274 AMYRYAGTFLKEAGFEQYEISNFARSNKYCRHNILYWQHGEYLGIGPGAHSYLN----KI 329

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             S     +++ + +      +   E +S E +  E + + LR+  G+ ++ +       
Sbjct: 330 RCSNSGDLKTYAEKLAAGQLPLESSEVISLETEISETIFLALRMLNGLDLEAFARCFAVR 389

Query: 354 LDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++    R +++    G IE V    LR T+ G+ + + V     
Sbjct: 390 VEDLYSRQIRKLTGLGLIETV-NGFLRLTEEGLPLANIVFREFV 432


>gi|154487407|ref|ZP_02028814.1| hypothetical protein BIFADO_01259 [Bifidobacterium adolescentis
           L2-32]
 gi|154083925|gb|EDN82970.1| hypothetical protein BIFADO_01259 [Bifidobacterium adolescentis
           L2-32]
          Length = 387

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 116/384 (30%), Positives = 186/384 (48%), Gaps = 15/384 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           +Y+H PFC+++C YCDFN++          + N+    + EM  +R            ++
Sbjct: 5   IYIHVPFCLRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMAIVRDWQTTHGINEPKVA 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+ ++  ++  +LD +   W ++ + EIT EANP +V  +  +     G NR
Sbjct: 65  TVFFGGGTPTTLKASDLVAMLDAVRATWGIADDAEITTEANPDTVNADYVKELADGGFNR 124

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS G+QS     L  L R H      A I  A     R S DLIY  P +++  W   ++
Sbjct: 125 ISFGMQSAVPHVLATLDRTHTPENVAAGIAAANAAGMRSSVDLIYGAPGESLDDWHTSVR 184

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LTI   T   +    G L  P ++   + Y +  ++ +  GL  YE
Sbjct: 185 TAIDLGVNHISAYALTIAPNTKMGRRIAAGTLSRPDDDDEANKYEIADTMFTEAGLEWYE 244

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRK 310
           ISN +  G ES HNL YWR  D+ G+GPGAHS          +      HP  W   + +
Sbjct: 245 ISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGDCEDGKGLRSWDIAHPRLWGTAINE 304

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                   E +++++  +E +M+GLR+REG+  + +  L    +  +    L+  G I  
Sbjct: 305 GNVPWAGSERITADEDIEETIMLGLRIREGLDTRQFSHL----IPEQKWIELEHDGLITM 360

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +   R   T RG  + D++I  L 
Sbjct: 361 LD-GRAIPTLRGRLLNDTIITELL 383


>gi|284048069|ref|YP_003398408.1| oxygen-independent coproporphyrinogen III oxidase [Acidaminococcus
           fermentans DSM 20731]
 gi|283952290|gb|ADB47093.1| oxygen-independent coproporphyrinogen III oxidase [Acidaminococcus
           fermentans DSM 20731]
          Length = 377

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 123/379 (32%), Positives = 198/379 (52%), Gaps = 15/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFCV KC YCDF S+         ++ +  + E+            ++++FGGG
Sbjct: 10  ALYVHIPFCVHKCAYCDFASYQIYNDHIMTDYARRLVEEISAWTPALPVSPTATVYFGGG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  +++A I+  + +        E T+EANP +V+    + YR+ G +R+SLG+QS
Sbjct: 70  TPSVLPLEDLAAIVTALKERGFWQHPAEATLEANPGTVDRERLRFYRQLGFDRLSLGIQS 129

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  +GR H A +A  AI LAR   F R+S DLIY  P QT+      L+R L   
Sbjct: 130 FQPEELAAMGRIHTAEQAEEAIALAREAGFRRISGDLIYGYPGQTVETVRDSLERLLDTG 189

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDH+S+Y LT+E+GTL  K  ++G  +LPSE+ +  +Y+         G H YEISN + 
Sbjct: 190 VDHVSVYGLTVEEGTLLAKQVREGKALLPSEDASGTMYDFLMEALPQAGYHRYEISNFAR 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW Y  Y+  G  A         ++  +  ++ +++L+       A  E+
Sbjct: 250 PGQESRHNQVYWHYDPYMAFGAAACRF----DGKIRETNPRNLQAYLQ------EAPPER 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L+ E +  E + M LR  +G+S++++    G +     E      ++QG+I R +  R
Sbjct: 300 EILTCEDRRAELVFMNLRTVKGLSLEEFTQRTGEDFFHIYEEGFTHCRKQGWITR-EGDR 358

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +R T++GM   +       
Sbjct: 359 IRLTEQGMRYGNLAFEEFL 377


>gi|315650267|ref|ZP_07903339.1| coproporphyrinogen dehydrogenase [Eubacterium saburreum DSM 3986]
 gi|315487378|gb|EFU77688.1| coproporphyrinogen dehydrogenase [Eubacterium saburreum DSM 3986]
          Length = 385

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 119/382 (31%), Positives = 203/382 (53%), Gaps = 8/382 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC +KC YCDF S        +  ++     E++   +      +SSIF GG
Sbjct: 6   LELYVHIPFCERKCEYCDFLSFSADDGEKRA-YVAQLADEIRAQGENYRDYLVSSIFIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I  I++ + +++ V+++ EITIE NP ++  +     +KAG+NRIS G+Q
Sbjct: 65  GTPTTLSGIWILEIMNTVRESFIVATDAEITIECNPGTLSKSKIMHIKKAGINRISFGLQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E+ L+ LGR H     + +  LAR   F  ++ DL+  LP QT+  ++  L+R    
Sbjct: 125 SSIEEELKALGRIHTYKGFLQSYQLAREFGFTNINVDLMSGLPYQTIDSYKTTLKRVCEL 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV--LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +H+S Y L IE GT F+  +  G+    LP EN    +Y +T+++   HG   YEISN
Sbjct: 185 KPEHISAYSLIIEPGTPFFDKYGSGEETALLPDENEDRSMYAITKAVLKEHGYERYEISN 244

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN+ YW    Y+G+G GA   V      V    +K+    +KM +      
Sbjct: 245 YAKPGRECRHNIGYWTGVSYLGLGVGASGYVMNRRFHVEGDYKKYMN--IKMQQDITPLY 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS- 374
            + E L ++   +EF+ +GLRL  G+S  ++    G ++    +R ++R   ++ ++++ 
Sbjct: 303 CDIEELDTKANMEEFMFLGLRLIRGVSRHEFNEKFGVDMFEVYDRQIKRNIMLKLMEYNS 362

Query: 375 -RLRCTQRGMTMLDSVIANLAV 395
             LR T +G+ + + V+++  +
Sbjct: 363 PYLRLTDKGLDLSNMVMSDFLL 384


>gi|126700081|ref|YP_001088978.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile 630]
 gi|115251518|emb|CAJ69351.1| Oxygen-independent coproporphyrinogen-III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Clostridium
           difficile]
          Length = 391

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 124/395 (31%), Positives = 197/395 (49%), Gaps = 25/395 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------------- 64
           LG+YVH PFCVKKC YCDFNS+       +  +I+    EM+                  
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDSKK-RYIEDLKIEMELYSNKLYKDNKYKNKECC 60

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   +
Sbjct: 61  SLNKNDKITSIFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLEKLK 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++ G+NR+S+G+Q+++E+ L F+GR H   E       A +  F  ++ DL+Y+LP Q
Sbjct: 121 TMKEIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINIDLMYSLPNQ 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  W+  L++ +     H+S Y L +E+GT  Y M++     L  ENV +++Y  T + 
Sbjct: 181 TLCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENVDIEMYEYTINY 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S     E
Sbjct: 241 LKSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGASGYINENRYNNVES----LE 296

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---E 359
            +   + K    + E E LS +   +E + MGLR+ +GI  +D++   G +   +     
Sbjct: 297 DYHLSLVKREKPIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFGIDFREKYNKQI 356

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L  +  I +  F  ++ TQ+G  + +SV     
Sbjct: 357 EMLLARKLINQ-SFEGIQLTQKGREISNSVFIEFM 390


>gi|169628753|ref|YP_001702402.1| coproporphyrinogen III oxidase [Mycobacterium abscessus ATCC 19977]
 gi|169240720|emb|CAM61748.1| Probable oxygen-independent coproporphyrinogen III oxidase HemN
           [Mycobacterium abscessus]
          Length = 388

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 122/397 (30%), Positives = 188/397 (47%), Gaps = 16/397 (4%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQ 60
           ++A    +        G+YVH PFC  +C YCDFN++             ++++   E++
Sbjct: 1   MTATLPPLVPAPGRPFGIYVHVPFCATRCGYCDFNTYTADELGEGTSPAGWLEALRAELE 60

Query: 61  WMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              + L G   + ++F GGGTPSL+    +A +LD I  ++ ++   E+T EANP S   
Sbjct: 61  LAARTLAGNPPVETVFVGGGTPSLLGGSGLAEVLDAIGAHFVLAPGAEVTTEANPESTSP 120

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYA 178
             F   R AG  R+SLG+QS     L  L R H    A+AA   AR      ++ DLIY 
Sbjct: 121 AFFDTIRAAGYTRVSLGMQSAAPHVLATLDRVHAPGRAVAAAREARAAGLGHVNLDLIYG 180

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T       +   L   VDH+S Y L +E+GT   +  + G+L  P E+   D Y L
Sbjct: 181 TPGETDDDLRRSIAAVLEAGVDHVSAYALVVEEGTALARRVRRGELPNPDEDALADRYQL 240

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             +  +  GL  YE+SN +  G +  HNL YW  GD+ G GPGAH  V      V     
Sbjct: 241 LDAALTEAGLDWYEVSNWARPGGQCRHNLGYWAGGDWWGAGPGAHGHVNG----VRWWNV 296

Query: 299 KHPESWLKM-VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           KHP ++ +  + +    V   E LS  ++  E +++ +RL  GI++ D  +     +   
Sbjct: 297 KHPNTYARRLLGEGQLPVGGHEILSPVERHTEEVLLAVRLNTGIALTDLTIEERGRVPAV 356

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +R L       R+   RL  T +G  + D V+  + 
Sbjct: 357 VDRGL------GRLVDERLVLTDQGRLLADGVVRAIL 387


>gi|255101625|ref|ZP_05330602.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-63q42]
 gi|255307494|ref|ZP_05351665.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile ATCC 43255]
          Length = 391

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 124/395 (31%), Positives = 197/395 (49%), Gaps = 25/395 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------------- 64
           LG+YVH PFCVKKC YCDFNS+       +  +I+    EM+                  
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDSKK-RYIEDLKIEMELYSNKLYKDNKYKNKECC 60

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   +
Sbjct: 61  SLNKNDKITSIFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLEKLK 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++ G+NR+S+G+Q+++E+ L F+GR H   E       A +  F  ++ DL+Y+LP Q
Sbjct: 121 TMKEIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINVDLMYSLPNQ 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  W+  L++ +     H+S Y L +E+GT  Y M++     L  ENV +++Y  T + 
Sbjct: 181 TLCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENVDIEMYEYTINY 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S     E
Sbjct: 241 LKSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGASGYINENRYNNVES----LE 296

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---E 359
            +   + K    + E E LS +   +E + MGLR+ +GI  +D++   G +   +     
Sbjct: 297 DYHLSLVKREKPIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFGIDFREKYNKQI 356

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L  +  I +  F  ++ TQ+G  + +SV     
Sbjct: 357 EMLLARKLINQ-SFEGIQLTQKGREISNSVFIEFM 390


>gi|220905467|ref|YP_002480779.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219869766|gb|ACL50101.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 484

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 127/391 (32%), Positives = 204/391 (52%), Gaps = 17/391 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG------QENFIQSFLTEMQWMRQLTGPR 69
            N + VY+H PFC  +C YC F S      V         +++ +   E+       G  
Sbjct: 12  ENPMLVYIHVPFCSTRCRYCAFYSSPLGRGVDPVSSPAVRDYVDTLFMELAHWGDRLGGS 71

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN-NFQGYRKA 128
            + ++FFGGGTPSL+ P+ IAL+++ + + +T+    E+T+EANP S+        Y +A
Sbjct: 72  PVQTVFFGGGTPSLLPPRVIALVMERLGRYFTLVPKAEVTLEANPESLRGGHRVAQYLEA 131

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQW 187
           GVNR+S+G+QSL+E  LR LGR H A +++ A  LAR      ++ DL++ LP Q++ QW
Sbjct: 132 GVNRLSIGIQSLDEGMLRMLGRPHKAQDSLHAAFLAREAGCANINVDLMWGLPGQSVRQW 191

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  +  + DH+S Y LT+E GT      ++G L+LP E     ++    ++   HG
Sbjct: 192 LQTLKDVMRMSPDHISAYGLTLEPGTPLELDVEEGRLMLPPERDQNIMFMEGAALLEQHG 251

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEISN + +G +  HNL YW   DY+G+GP A S +         +     ++W   
Sbjct: 252 YLHYEISNFARMGFQCRHNLGYWEGEDYLGLGPSATSTIGG----RRWTNPASQKAWDVR 307

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQR 364
            R+      + E L+ + +  E LM+ LR   G+ VK +  + GR+         + L  
Sbjct: 308 TREGSLG-QDVEELTPQTRVLELLMLRLRTTRGLRVKAYREMTGRDFVRDHQRLVQALHE 366

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G I R++   LR T+ GM + +S+++NL  
Sbjct: 367 NGLI-RIRNGYLRLTRSGMLVSNSILSNLFA 396


>gi|218778961|ref|YP_002430279.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760345|gb|ACL02811.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfatibacillum alkenivorans AK-01]
          Length = 377

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 139/381 (36%), Positives = 201/381 (52%), Gaps = 16/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC KKC YCDF S           +I++   EMQ      GP    ++FFGGG
Sbjct: 3   GLYIHVPFCRKKCRYCDFYSVT--DDSAIPAYIKALKREMQIREWDAGP--FDTVFFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++ P  +A IL+  +  + ++ + E+T+EANP +V  N+ + +++AGVNRISLGVQS
Sbjct: 59  TPSVLPPGRVAEILERASLIFGIAPDAEVTLEANPGTVSQNDLEAFQQAGVNRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++Q+L+FLGR H+A EA  A+  A    F  +  DLIY +P QT   W  +L+  L+Y 
Sbjct: 119 LDDQTLQFLGRIHSAFEARLALDWAMEAGFDSVGCDLIYGVPGQTRESWTKDLEDVLAYG 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y LTIE+ T   +  + G+     E    +L+  T     + G   YEISN + 
Sbjct: 179 PDHLSCYILTIEESTPLGRALERGEFSPMDEGRVGELFLHTSDFLESKGFLHYEISNFAR 238

Query: 259 LGAE--SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
            G E    HNL+YW +  Y+G+GP AHS +++G            E +L MV      + 
Sbjct: 239 -GREKACRHNLHYWNHAPYLGLGPAAHSFLEIGRQWNVS----DLEIYLAMVNAGRMPME 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQF 373
           E E L+ EQ   E+L  GLR  +GI   ++     +          + LQ +G   R   
Sbjct: 294 ESEILTEEQHMLEWLYTGLRQAKGIDAGEFLRRFDKAFLDIFGPDWKRLQDEGL-ARESS 352

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
                T++GM   D V   LA
Sbjct: 353 QSFALTKKGMLFSDGVCQLLA 373


>gi|254976059|ref|ZP_05272531.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-66c26]
 gi|255093450|ref|ZP_05322928.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile CIP 107932]
 gi|255315192|ref|ZP_05356775.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-76w55]
 gi|255517861|ref|ZP_05385537.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-97b34]
 gi|255650977|ref|ZP_05397879.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-37x79]
 gi|260684045|ref|YP_003215330.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile CD196]
 gi|260687705|ref|YP_003218839.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile R20291]
 gi|306520851|ref|ZP_07407198.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile QCD-32g58]
 gi|260210208|emb|CBA64428.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile CD196]
 gi|260213722|emb|CBE05617.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile R20291]
          Length = 391

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 124/395 (31%), Positives = 197/395 (49%), Gaps = 25/395 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------------- 64
           LG+YVH PFCVKKC YCDFNS+       +  +I+    EM+                  
Sbjct: 2   LGLYVHIPFCVKKCKYCDFNSYKMDIDSKK-RYIEDLKIEMKLYSNKLYKDNKYKNKECC 60

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     I+SIF GGGTPS++    I  +   I + + +  N EITIE NP ++ +   +
Sbjct: 61  SLNKNDKITSIFVGGGTPSILTSDEIREVFISIKEMFDIDENAEITIECNPGTLTLEKLK 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++ G+NR+S+G+Q+++E+ L F+GR H   E       A +  F  ++ DL+Y+LP Q
Sbjct: 121 TMKEIGINRLSIGLQAIQEKHLNFIGRIHTYEEFEKNYKDALSVGFKNINVDLMYSLPNQ 180

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  W+  L++ +     H+S Y L +E+GT  Y M++     L  ENV +++Y  T + 
Sbjct: 181 TLCDWKETLEKVVHLNPTHISAYSLILEEGTELYNMYESNKFELIDENVDIEMYEYTINY 240

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             + G + YEISN+S  G    HN+ YW    YIGIG GA   +    +    S     E
Sbjct: 241 LKSKGYNQYEISNYSKEGYNCEHNILYWECEHYIGIGAGASGYINENRYNNVES----LE 296

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---E 359
            +   + K    + E E LS +   +E + MGLR+ +GI  +D++   G +   +     
Sbjct: 297 DYHLSLVKREKPIQENEILSEKDMIEEKIFMGLRMNKGIKFEDFKKKFGIDFREKYNKQI 356

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L  +  I +  F  ++ TQ+G  + +SV     
Sbjct: 357 EMLLARKLINQ-SFEGIQLTQKGREISNSVFIEFM 390


>gi|328465519|gb|EGF36748.1| coproporphyrinogen III oxidase [Listeria monocytogenes 1816]
          Length = 342

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 6/336 (1%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N       S  VY+H PFC   C YCDFN      +   + ++   + EM+         
Sbjct: 3   NTNQSSKESSAVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIA 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++F GGGTP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  G
Sbjct: 62  PVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSFEANPGDLSLSKLQAMQDHG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           VNRIS+GVQS   + L+ +GR H   +   ++  + +  F  +S DLI++LP QT   ++
Sbjct: 122 VNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIGFENVSIDLIFSLPGQTEADFQ 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG 
Sbjct: 182 DTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGR 241

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ +
Sbjct: 242 KQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPL 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +KN     +++ L+ +++ +E + +GLR  +G+   
Sbjct: 298 QKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKN 333


>gi|261856896|ref|YP_003264179.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
 gi|261837365|gb|ACX97132.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
          Length = 388

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 193/385 (50%), Gaps = 13/385 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  L +YVH P+CV+KCPYCDFNSH  + K + + ++I + L +++    L   R I +I
Sbjct: 9   NPPLALYVHLPWCVEKCPYCDFNSHGLKGKTLPERDYIDALLRDVERELPLIWGRPIETI 68

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL  P+ I  ++ G+     +    E+T E NP +    +   YR  G+ R+S
Sbjct: 69  FIGGGTPSLFHPEAIDRLMCGLRALLDLRFCCEVTFEVNPGTEMAGHLADYRAIGITRVS 128

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           +GVQS  E+ L+ LGR H+A  A  AI  A +      + DL++ LP+Q+  +   +L  
Sbjct: 129 IGVQSFNERHLKKLGRIHDAKAAFRAIEAAHDAGLNSFNIDLMHGLPEQSAEEALADLHT 188

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+S    HLS YQLT+E  T F         VLP +     +     +     GL  YE+
Sbjct: 189 AISLNPPHLSWYQLTLEPNTPFAAHPP----VLPDDETMDRMQAQGLAALHEAGLIQYEV 244

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG--SHRVAISIEKHPESWLKMVRKN 311
           S ++    +  HN NYW +GDY+GIG GAH ++ +   +        +HP  +L   +  
Sbjct: 245 SAYAQDNHQCQHNRNYWEFGDYLGIGAGAHGKITLAAENRIERRERLRHPNEYL--TKAG 302

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
               +    + +++   EF++  LRL +G  V  +    G  + +  +    L+++  I 
Sbjct: 303 TEQAITAHSIPTDELPFEFMLNALRLTDGFEVPLFTARTGMPIKVISDVLHQLEKEELI- 361

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           R   +R+  T RG   L+ ++    
Sbjct: 362 RWDITRIAPTLRGTRYLNDLLLRFL 386


>gi|225351983|ref|ZP_03743006.1| hypothetical protein BIFPSEUDO_03588 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157230|gb|EEG70569.1| hypothetical protein BIFPSEUDO_03588 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 401

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 120/397 (30%), Positives = 192/397 (48%), Gaps = 29/397 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQ-----WMRQLTGPRSISS 73
           Y+H PFC+++C YCDFN++          + N+    + EM       +         ++
Sbjct: 5   YIHVPFCIRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMSIVHDWQIAHGVNEPEAAT 64

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP++++  ++  +L+ +   W ++ N EIT EANP +V  +  +     G NRI
Sbjct: 65  VFFGGGTPTILKASDLVAMLNAVRDTWGIADNAEITTEANPDTVNADYVKELADGGFNRI 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S G+QS     L+ L R H  +   A I  A     R S DLIY  P +++  W + ++ 
Sbjct: 125 SFGMQSAVPSVLKTLDRTHTPANVAAGIAAANAAGMRSSVDLIYGAPGESLDDWRVSVRT 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+   VDH+S Y LT+   T   +    G L  P ++     Y +   + SA GL  YEI
Sbjct: 185 AIDLGVDHISAYALTVAPNTKMGRQIAVGTLPTPDDDDEATKYEIADDLLSAAGLEWYEI 244

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK----------------VGSHRVAISI 297
           SN +  G ES HNL YWR  D+ G+GPGAHS                   V S  +    
Sbjct: 245 SNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGNVMDVEQSTSAETSETVKSSGLRSWD 304

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
             HP  W + +  +       E +S+E+  +E +M+GLR+REG+ +       G  +D+ 
Sbjct: 305 IAHPRMWGQAINDDNVPWSGSERISNEENLEEIIMLGLRIREGLDLSRL----GNMVDMA 360

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             + ++ +G I  ++  R+  T+ G  + D+VI    
Sbjct: 361 RIQPMEDEGLIV-IRDGRVIPTRTGRLLNDTVIERFF 396


>gi|329770218|ref|ZP_08261608.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           sanguinis M325]
 gi|328837024|gb|EGF86668.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           sanguinis M325]
          Length = 377

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 116/385 (30%), Positives = 204/385 (52%), Gaps = 14/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   GVY+H PFC   C YCDFN    + +   + +I   + E++ + Q++    I +I
Sbjct: 2   KNTPRGVYIHIPFCKYICSYCDFNKFFIQRQ-PVDKYIDCLIKEIETIEQVSD---IETI 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +  + +  +L  + K        E T EANP  +  +     ++ GV+RIS
Sbjct: 58  YIGGGTPSALNDEQLHRLLTALRKKIP-GQLREFTFEANPEDLVDSRVALVKEYGVDRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+   + L+ LGR H A++   AI+  +      ++ DL+++LPKQTM      ++R
Sbjct: 117 MGVQTFNNELLKILGRGHVANDVDMAINNCKKHGIENINVDLMFSLPKQTMEDLYDSMKR 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +SY + H+S Y L +E+ T  Y   +D  +VLPS      +YN   +  + +G   YEI
Sbjct: 177 VVSYDISHVSCYSLILEQKTKLYNQVRDKKVVLPSNETEEQMYNEVINFLTENGYEQYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES+HN +YWR  +Y G+G GAH  +    +    +     + ++  + + GH
Sbjct: 237 SNFACPGHESIHNSSYWRNIEYYGLGAGAHGYIDGIRYANQGA----LKFYIDSMEEKGH 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
           A  E+  ++  +Q +E + +GLRL EG+ +  +E   G+ +    +  ++R    G++E 
Sbjct: 293 ARREENKVTLNEQIEEEMFLGLRLLEGVDLVAFEEKYGKKVQEIFKDVVERNISDGYLEI 352

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           V  ++LR T++G+   + V +   +
Sbjct: 353 V-GNKLRLTRKGLFYGNDVFSEFLL 376


>gi|114321595|ref|YP_743278.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227989|gb|ABI57788.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 398

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 143/402 (35%), Positives = 205/402 (50%), Gaps = 21/402 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-----------RRYKVGQENFIQSFLT 57
           N   G     LGVY+H P+CV+KCPYCDFNSH                +  E + ++ LT
Sbjct: 2   NPQAGTPPPPLGVYLHLPWCVQKCPYCDFNSHAPARADRRADASTLPAIPHERYTRAVLT 61

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           ++         R + ++F GGGTPSL  P+ I  +L+ + +   ++ + EIT+EANP +V
Sbjct: 62  DLASAAGPLQGRRVETVFIGGGTPSLFPPEAIGGLLEALDRRLGLTGDAEITLEANPGTV 121

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLI 176
           E   F GYR AGVNR+S+GVQS +  +LR LGR H   E   A     R  F R++ DL+
Sbjct: 122 EQGRFHGYRAAGVNRLSIGVQSFDAGALRRLGRIHGPEEARRAVRAARRAGFRRINLDLM 181

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           YALP QT  Q   +++ AL+ A +H+S YQLT+E GT F+         LP E   + L 
Sbjct: 182 YALPGQTTAQALADVEAALALAPEHISHYQLTLEPGTPFHSRPP---ADLPDEARLLALE 238

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR--VA 294
              +   +A GL  YE+S  +  G    HNLNYWR+GDY+G+G GAH ++   +      
Sbjct: 239 AACRERLAAAGLTRYEVSAWAHPGEACRHNLNYWRFGDYLGLGAGAHGKLSDPARDEIRR 298

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN- 353
            +  + P +++        A+ E   L +     EF+M  LRL EG    DW    GR  
Sbjct: 299 EARVRMPGTYMAQAGTPA-AIAELRRLQNGDIVLEFMMNALRLAEGFHRDDWRRHTGRPT 357

Query: 354 -LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L  +        G +      R+R TQRG  +LD ++    
Sbjct: 358 TLFEDRVAEAVTDGLLS-DDGGRIRPTQRGWQLLDGLLQRFL 398


>gi|262370614|ref|ZP_06063939.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262314414|gb|EEY95456.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 384

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 131/384 (34%), Positives = 209/384 (54%), Gaps = 16/384 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK----VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH           ++ ++ + + + +   +    R I S
Sbjct: 10  PLSLYIHMPWCVRKCPYCDFNSHAVPDGKLSLDLEQEYLHALVEDFKTQLEFAQGRHIHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSLI  Q    +   +        + EIT+EANP +VE + F  Y   G+NR+
Sbjct: 70  VFIGGGTPSLISAQGYQWLFAQLKALLPFEVDCEITLEANPGTVEHDPFADYLAVGINRL 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS   + L  LGR H+ ++AI+AI LAR+  F R++ DL++ LP+QT+ Q  ++L+
Sbjct: 130 SIGVQSFNTEHLTKLGRIHSNTDAISAIDLARDAGFKRINVDLMHGLPEQTLEQALLDLK 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+     H+S YQLTIE  T+F++       VLP ++V  ++    ++   A G   YE
Sbjct: 190 LAVDNGATHISWYQLTIEPNTVFFR----TKPVLPVDDVLEEIQAQGEAYLKAQGFINYE 245

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +S        S HNLNYW++GDY+ IG GAH++V            + P+ +L  V    
Sbjct: 246 VSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHAKVTQPDGVYRFQKTRLPKDYLAKVPAEH 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIER 370
              V+ + + +++   EF+M  LRL +G++ + +    G NLD   E   +L+ +  +  
Sbjct: 305 ---VQFKRIEADELPFEFMMNALRLNDGVAAEYYAQRTGLNLDSLAETLDSLRSRKLMVD 361

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               RL CT++G   L+SV+    
Sbjct: 362 DAM-RLACTEQGHVFLNSVLEEFI 384


>gi|91201534|emb|CAJ74594.1| similar to coproporphyrinogen III oxidase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 398

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 195/380 (51%), Gaps = 13/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC KKC YCDFNS V    +  + +I +   E+    +     +  +++ GG
Sbjct: 28  LPLYLHIPFCSKKCDYCDFNSIVSEADI-IDRYINALGKELNAFAE---RYACDTVYVGG 83

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++    I  +L  I +    +   E T+EANP ++     +  ++ GVNRIS+GVQ
Sbjct: 84  GTPTILNENQIKTLLHSIRRCPENADAPEYTVEANPGTLTRGKVRLLKECGVNRISVGVQ 143

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L FLGR H ++ A+ +I L     F  ++ DLI+  P QT+ +W  +L+ A+  
Sbjct: 144 SFQDRYLNFLGRIHTSAVAVQSIELIISEGFKNVNIDLIFGYPGQTLDEWIRDLRMAVEL 203

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y LT E  T   K  ++G +    E + + +Y         +    YEISN +
Sbjct: 204 QPEHISTYALTYEGETPLAKKAENGSISKLDEEIELKMYKTAIRFLQENNYCHYEISNFA 263

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G E +HN+NYW    YIGIG GA S +           E++   ++K +  N    V 
Sbjct: 264 RPGYECVHNINYWNNKRYIGIGAGACSFIDGERTMN----ERNVLQYIKAIEDNTEVKVF 319

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFS 374
           +E L   + A E ++M LR+  GIS  ++    G  ++ +     ++LQ  G +      
Sbjct: 320 RESLLPHKYASETIVMALRMLRGISGIEFYDRFGYKIEDQFGTQMKDLQCLGLV-NYDDK 378

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL+ T++G+ + DSV++   
Sbjct: 379 RLKLTEKGLFVADSVMSEFL 398


>gi|322411969|gb|EFY02877.1| coproporphyrinogen III oxidase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 376

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 118/385 (30%), Positives = 202/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLEALIQEFESY----DINDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I    +  +L  + +N  +    E TIEANP  +  +  +  +++ VNRIS
Sbjct: 57  YIGGGTPTAITAAQLKYLLSHLERNLNLDYLEEFTIEANPGDLTPDKIEVLKQSSVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I   +   F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKAAGFHNISIDLIYALPGQTLAQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+ ++ ++   G + +       R+LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVFIQRFQEKFGISFEERYGTIVRDLQDQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|255021076|ref|ZP_05293129.1| hypothetical protein ACA_2803 [Acidithiobacillus caldus ATCC 51756]
 gi|254969490|gb|EET26999.1| hypothetical protein ACA_2803 [Acidithiobacillus caldus ATCC 51756]
          Length = 399

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 137/383 (35%), Positives = 209/383 (54%), Gaps = 9/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +L VYVH P+C+ KCPYCDFNS+    +   E+++ + + +++        R + SIF
Sbjct: 7   APALSVYVHLPWCLAKCPYCDFNSYAA-PEFPAEHYVDALIADLERELPRIWGRPVHSIF 65

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL  P++IA +L  +     +   +E+++EANP + E   F+ +R+AG+ R+SL
Sbjct: 66  LGGGTPSLFPPESIARLLSELRARLRLMPGLEVSLEANPGASEAARFRAFRQAGITRLSL 125

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS ++  L  LGR H+   A+AA+  +    F   + DLI+ALP Q +     +L+RA
Sbjct: 126 GVQSFDDGFLARLGRIHDGRAAMAAVSAILEAGFASWNLDLIFALPGQDLAAALADLERA 185

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+YA  HLSLYQLT+E GT F +        LP E++A D+    +      GL  YEIS
Sbjct: 186 LAYAPPHLSLYQLTLEAGTPFARQAPS---GLPGEDLAADMELALRERLQEAGLARYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV-GSHRVAISIEKHPESWLKMVRKNGH 313
            H+  G E  HN NYWR+GDY+GIG GAH ++ + G           PES+L        
Sbjct: 243 AHARPGQECWHNRNYWRFGDYVGIGAGAHGKITLPGQGIWRSQKPARPESYLSDALGPAA 302

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-LDIE-CERNLQRQGFIERV 371
            +    +++  ++  EFL+  LRL EG S   +E   G   L IE   R  +++G +   
Sbjct: 303 QIGRGHWVAPAERPFEFLLNTLRLLEGFSCAQFEAGTGLPCLQIEPQLRRARKEGLLT-F 361

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +  R R T+ G+   + +     
Sbjct: 362 EDGRWRPTRFGLDWHNELCGRFL 384


>gi|86608370|ref|YP_477132.1| coproporphyrinogen III oxidase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556912|gb|ABD01869.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 405

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 186/385 (48%), Gaps = 17/385 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM----QWMRQLTGPRSISSIF 75
             Y+H PFC ++C YCDF + +   K+  E ++Q    E+    ++      PR ++SIF
Sbjct: 29  AAYLHIPFCRQRCHYCDFATGLGTRKL-METYVQMLCREIGGAYRYRHLAGDPRPLTSIF 87

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + +  IL  + +      + EI++EANP ++      GYR+ GVNRISL
Sbjct: 88  FGGGTPSLLTVEQLGRILTQLRERIPFHPDCEISLEANPGTLTREQLAGYRELGVNRISL 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L   GR H   E   A+  L    F   + DLI+ LP QT+  W+  L+  
Sbjct: 148 GVQAFQPELLAACGRLHGVEEVYEAVADLQAAGFENFNLDLIFELPYQTLEHWQQSLRAV 207

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L     H+S+Y LTIE GT F +M++ G   LPSE   V +Y + + + +  G   YEIS
Sbjct: 208 LEINPTHVSVYDLTIEPGTRFGRMYRPGAAPLPSEETTVAMYLMARELLTEAGYIHYEIS 267

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G    HN  YW    Y G G G+            I   K    + + V+   H 
Sbjct: 268 NFARPGYACRHNRVYWENRPYFGFGMGSVGY----EGGRRIQQPKTLYHYFEQVKVGVHP 323

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           +  +   S E+   + LM+GLRL+EG+ +   +   G     +    L     +G+    
Sbjct: 324 LPPEA--SPEEVWMDTLMLGLRLQEGLDLCHLQERFGHPKVEQALERLDPYFEKGW-ASC 380

Query: 372 QFSRLRC-TQRGMTMLDSVIANLAV 395
           +  RLR     G    + ++ +L  
Sbjct: 381 EAGRLRLIPPDGWLFSNEILRDLLA 405


>gi|255321256|ref|ZP_05362422.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter radioresistens SK82]
 gi|262380058|ref|ZP_06073213.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255301810|gb|EET81061.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter radioresistens SK82]
 gi|262298252|gb|EEY86166.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 384

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK----VGQENFIQSFLTEMQWMRQLTGPRSISS 73
            L +Y+H P+CV+KCPYCDFNSH           ++ ++Q+ + + +        R + S
Sbjct: 10  PLSLYIHMPWCVRKCPYCDFNSHAVPDGKLSLELEQEYLQALVEDFKTQLHFAQGRKLHS 69

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSLI       +   +          EIT+EANP +VE + F GY  AG+NR+
Sbjct: 70  IFIGGGTPSLISASGYQWLFQQLNGLLPFEEQCEITLEANPGTVEHDPFAGYLAAGINRL 129

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  EQ L+ LGR H+A  AI AIH A+   F R++ DL++ LP+QT+ Q   +L+
Sbjct: 130 SIGVQTFNEQHLKQLGRIHSAENAINAIHQAQEAGFKRINIDLMHGLPQQTLEQALTDLR 189

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+     H+S YQLTIE  T+F++       VLP ENV   +    ++   AHG   YE
Sbjct: 190 MAVENGATHISWYQLTIEPNTVFFR----TQPVLPVENVLEHIQEQGEAYLKAHGFIQYE 245

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS        S HN+NYW++GDY+ IG GAH++V +          + P+ +L  +    
Sbjct: 246 ISAWRKE-EPSAHNMNYWQFGDYLAIGAGAHAKVSLQDGVYRFQKTRLPKDYLAKIPAEH 304

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERV 371
               + E    E    EF+M  LRL EG+  + +    G  L+ I+ + +  RQ  +   
Sbjct: 305 LQFKKIE---PEDMPFEFMMNALRLNEGVPARFYNERTGYELEKIQPKLDSLRQRHLFSE 361

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              +L CT  G   L+SV+    
Sbjct: 362 NTEQLACTAHGHLFLNSVLEEFL 384


>gi|260578255|ref|ZP_05846171.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           jeikeium ATCC 43734]
 gi|258603557|gb|EEW16818.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           jeikeium ATCC 43734]
          Length = 409

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 122/410 (29%), Positives = 197/410 (48%), Gaps = 41/410 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----------FIQSFLTEMQWMRQ-LTGP 68
           G+Y+H PFC  +C YCDFN++  +     +           ++ +   E++   +    P
Sbjct: 3   GLYIHVPFCSTRCGYCDFNTYTPQELSAADGSAVDGNTIPGYLDALERELEVAAEVWDYP 62

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPS++  + +A  L+   +   ++++ E+T EANP S     F G R+A
Sbjct: 63  GEVQTVFFGGGTPSMLGHEGLARALNAARRTIGLAADAEVTTEANPESTSPEFFAGLREA 122

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRISLG+QS     L+ L R H     I A   A+   F  ++ D+IY  P +T    
Sbjct: 123 GFNRISLGMQSAMGHVLKVLERQHTPGRPIEATREAKRAGFEHINLDVIYGTPTETDEDL 182

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   L   VDH+S Y L +E GT   +  + G+L  P E+   D Y+   +     G
Sbjct: 183 RRTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDTLADRYDAIDARLRDAG 242

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR------VAISIEKHP 301
            + YE+SN +  G E  HNL YWR G + G GPGAH  V++          V +   K P
Sbjct: 243 FNWYEVSNWAKPGGECQHNLIYWRSGQWWGAGPGAHGCVRLRGEGHSESGLVRLVNAKRP 302

Query: 302 ESWLKMV---------RKNGHA----VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            ++   +          K+G      VV  E L+++    E +M+ LRL EG+       
Sbjct: 303 ATYWDGLLGEAEGASTGKDGLPVPGSVVTTERLTNDDLRTEHVMLQLRLAEGL------K 356

Query: 349 LAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           L G + + E  + ++R    G +++    RLR T +G  + D ++ ++ +
Sbjct: 357 LVGSDENAELAQVIERYTGLGLLDK-HGERLRLTDKGRYLADGIVTDIVL 405


>gi|82751186|ref|YP_416927.1| coproporphyrinogen III oxidase [Staphylococcus aureus RF122]
 gi|82656717|emb|CAI81144.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus RF122]
          Length = 374

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 194/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDME 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLCADMYQLMMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++   G++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFGQSIESVFGQTINNLKEKKLIVE-KNDA 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|239917741|ref|YP_002957299.1| coproporphyrinogen III oxidase, anaerobic [Micrococcus luteus NCTC
           2665]
 gi|281413764|ref|ZP_06245506.1| coproporphyrinogen III oxidase, anaerobic [Micrococcus luteus NCTC
           2665]
 gi|239838948|gb|ACS30745.1| coproporphyrinogen III oxidase, anaerobic [Micrococcus luteus NCTC
           2665]
          Length = 426

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 107/394 (27%), Positives = 177/394 (44%), Gaps = 21/394 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGP-----R 69
           +  +YVH PFC  +C YCDFN++         G+ ++ +S +TE+ +   +        R
Sbjct: 35  TFSLYVHVPFCTVRCGYCDFNTYTAVDLGPGAGRGDYWESAVTELDFAADVLASSDVPAR 94

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTP+L+   ++  IL      + ++   E+T EANP ++     +     G
Sbjct: 95  PLHTVFFGGGTPTLLPAADLVRILQAAVDRFGIAPGAEVTTEANPDTITPEYARQLAAGG 154

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+SLG+QS     L  L R H      AA+  AR     +S DLIY    +++  W  
Sbjct: 155 FTRLSLGMQSAVPHVLATLERTHRPESVPAAVAAAREAGLEVSLDLIYGTAGESLADWRA 214

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ A+  A DH+S Y L +E+GT        G++     +   D Y L + +  A G  
Sbjct: 215 TLEAAVVLAPDHVSAYSLIVEEGTKLGAQVARGEVADVDPDDQADKYLLAEELLGAAGYR 274

Query: 250 AYEISNHSFLG-----AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            YE+SN +          + HN+ YW   D+ GIGPGAHS +      V     KHP ++
Sbjct: 275 WYEVSNWARDPQGSGVHRARHNVAYWEDQDWWGIGPGAHSHLAG----VRFWNAKHPAAY 330

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIE-CERNL 362
            + +       V +E   ++ +  E +M+ +R  +G+   +      G           L
Sbjct: 331 AQRLATGVTPAVGRERPDADARRLERIMLAVRTVDGLPTAELVSETPGEAARTRGAIAEL 390

Query: 363 QRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
              G ++       R+  T  G    D+++  LA
Sbjct: 391 IAAGLLDGRAAVDGRIVPTLEGRLRNDAIVRALA 424


>gi|282900400|ref|ZP_06308350.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Cylindrospermopsis raciborskii CS-505]
 gi|281194713|gb|EFA69660.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Cylindrospermopsis raciborskii CS-505]
          Length = 388

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 206/389 (52%), Gaps = 20/389 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSI 71
               YVH PFC ++C YCDF  +V   +V  E       ++ S   E+      + P  +
Sbjct: 6   PTAAYVHIPFCRRRCFYCDFPVYVTGDRVSGEASHTISQYVDSICHEISITPTFSEP--L 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+  + +  IL  + + + + S +EI++E +P + ++   QGY+ AGVN
Sbjct: 64  RTVFFGGGTPSLLSAKQLEQILSSLEQRFAMESKIEISMEIDPGTFDLARIQGYKNAGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ+   + L+  GR+H+  +  AAI +   +  P  S DLI  LP Q++ QW+  
Sbjct: 124 RVSLGVQTFTPELLKTAGRSHSVEDIFAAIDIVNQVEIPEFSIDLISGLPHQSIEQWQNS 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + +  A  H+S+Y LTIE GT+F + ++ GD  LP++ + V +Y L Q + +  G   
Sbjct: 184 LTKGVEIAPTHISIYDLTIEPGTVFGRYYQAGDHPLPADEMTVKMYELGQEMLTGAGYEH 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G +  HN  YW+   Y G G GA S V+        S  +  + + + +  
Sbjct: 244 YEISNYAKPGHQCKHNRVYWQNLAYYGFGMGATSYVEGKR----FSRPRRIQEYYQWLNN 299

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GF 367
              A+++ + +  +++  E +M+G+RL EG+S+       G     + ++ LQ     G+
Sbjct: 300 G--AIIDAKVIYVDEELLETIMLGMRLAEGLSLGVLAEKFGHQRVEKIQKCLQTYVIPGW 357

Query: 368 IERVQFSRLRCT-QRGMTMLDSVIANLAV 395
           ++     RL  T  +G    + V+ +L  
Sbjct: 358 VKLTT-DRLCLTDPQGFLFSNVVLGDLFA 385


>gi|289705014|ref|ZP_06501427.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Micrococcus luteus SK58]
 gi|289558273|gb|EFD51551.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Micrococcus luteus SK58]
          Length = 426

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 179/394 (45%), Gaps = 21/394 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGP-----R 69
           +  +YVH PFC  +C YCDFN++         G+ ++ +S +TE+ +   +        R
Sbjct: 35  TFSLYVHVPFCTVRCGYCDFNTYTAVDLGPGAGRGDYWESAVTELDFAADVLASSDVPAR 94

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTP+L+   ++  IL      + ++   E+T EANP ++     +     G
Sbjct: 95  PLHTVFFGGGTPTLLPAADLVRILQAAVDRFGIAPGAEVTTEANPDTITPEYARELAAGG 154

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+SLG+QS     L  L R H      AA+  AR     +S DLIY    +++  W  
Sbjct: 155 FTRLSLGMQSAVPHVLATLERTHRPESVPAAVAAAREAGLEVSLDLIYGTAGESLADWRA 214

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ A++ A DH+S Y L +E+GT        G++     +   D Y L + + SA G  
Sbjct: 215 TLEAAVALAPDHVSAYSLIVEEGTKLGAQVARGEVADVDPDDQADKYLLAEELLSAAGYR 274

Query: 250 AYEISNHSFLG-----AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            YE+SN +          + HN+ YW   D+ GIGPGAHS +      V     KHP ++
Sbjct: 275 WYEVSNWARDPQGSGVHRARHNVAYWEDQDWWGIGPGAHSHLAG----VRFWNAKHPAAY 330

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIE-CERNL 362
            + +       V +E   ++ +  E +M+ +R  +G+   +      G    I      L
Sbjct: 331 AQRLATGVTPAVGRERPDADARRLERIMLAVRTVDGLPTAELVSETPGEAARIRGAIAEL 390

Query: 363 QRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
              G ++        +  T  G    D+++  LA
Sbjct: 391 IAAGLLDGRAAVNGSIVPTLEGRLRNDAIVRALA 424


>gi|329767730|ref|ZP_08259246.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans M341]
 gi|328838831|gb|EGF88425.1| oxygen-independent coproporphyrinogen III oxidase [Gemella
           haemolysans M341]
          Length = 377

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 108/382 (28%), Positives = 199/382 (52%), Gaps = 14/382 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             GVY+H PFC   C YCDFN    + +   + +I   + E++ M  +   +++ +I+ G
Sbjct: 5   PRGVYIHIPFCKYICSYCDFNKFYIQRQ-PVDKYIDCLIKEIESMENI---QNVETIYIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +  + +  +L  +          E T EANP  +  +     +  GVNRIS+GV
Sbjct: 61  GGTPSALSDEQLHRLLTALRNKIP-QQLREFTFEANPEDLVDSRVALVKGYGVNRISMGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+   + L+ LGR H A +   AI   +      ++ DL+++LPKQTM      +++   
Sbjct: 120 QTFNNELLKILGRGHVADDVDMAIANCKKHGIEDINVDLMFSLPKQTMDDLYDSMKKVAE 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y + H+S Y L +E+ T  Y   +D  + LPS      +YN   +  + +G   YEISN 
Sbjct: 180 YNISHISCYSLILEQKTKLYNQVRDKKVTLPSNETEEKMYNEVINFLTENGYEQYEISNF 239

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES+HN +YW+  +Y G+G GAH  +    +    +     + ++  + + GHA  
Sbjct: 240 ARPGHESVHNSSYWKNIEYYGLGAGAHGYIDGVRYANQGA----LKFYIDSMLEKGHARR 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQF 373
           E+  ++++++ +E + +GLRL +G+ +  +E   G+  +   +  +    R+G++E ++ 
Sbjct: 296 EENTVTTKEKIEEEMFLGLRLLKGVDLDIFEEKYGKRAEEIFKDVIDKNIREGYLE-IED 354

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           ++LR T++G+   + V +   +
Sbjct: 355 NKLRLTRKGLFYGNDVFSEFLL 376


>gi|294790840|ref|ZP_06755998.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Scardovia inopinata F0304]
 gi|294458737|gb|EFG27090.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Scardovia inopinata F0304]
          Length = 419

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 123/391 (31%), Positives = 191/391 (48%), Gaps = 16/391 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSI--- 71
              +Y+H PFC+++C YCDFN++      G   ++N+    + EM  ++Q    + I   
Sbjct: 26  PFSLYIHVPFCMRRCGYCDFNTYTASDLGGGASRDNYANLAVQEMVLVKQWQEEQGIKEP 85

Query: 72  --SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             S++FFGGGTP+++   ++  IL      W +    EIT EANP +V+ N        G
Sbjct: 86  ALSTVFFGGGTPTILPAHDLISILSAARDIWGICEGAEITTEANPDTVDSNYIHQLADGG 145

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             RIS G+QS     L  L R H  +   + +  A+    R S DLIY  P +++ QWE+
Sbjct: 146 FTRISFGMQSAVPSVLATLDRTHTPAHVESGVRAAQKAGLRTSLDLIYGTPGESLDQWEV 205

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+ AL   V H+S Y LT+E  T   +    G L  P ++   + Y L + + +  GL 
Sbjct: 206 SLRAALDLGVTHISAYALTVEPHTAMGRRISRGQLPAPDDDDQAEKYRLAERMLTDAGLS 265

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN +  G ES HNL YW   D+ GIGPGAHS       R       HP +W + + 
Sbjct: 266 WYEVSNWALPGDESRHNLGYWHNIDWAGIGPGAHSHYNFQPLR--AWDIAHPRAWAQTMT 323

Query: 310 KNGH-AVVEKEFLSSEQQADEFLMMGLRLREGISV---KDWEMLAG-RNLDIECERNLQR 364
            +       +E +S  +  +E +++G+R+R+G+S+       +  G   LD     +L+ 
Sbjct: 324 DDKRVPWQGQENISPSENLEEAILLGVRIRDGLSLDLTDSLAVRQGLEPLDESVIHDLES 383

Query: 365 QGFIERVQFSR-LRCTQRGMTMLDSVIANLA 394
           +G +      R L  T  G  + D VI  L 
Sbjct: 384 EGLVTVTTEPRILTPTLNGRLLNDLVIERLF 414


>gi|253732236|ref|ZP_04866401.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257793659|ref|ZP_05642638.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9781]
 gi|258411041|ref|ZP_05681321.1| coproporphyrinogen oxidase [Staphylococcus aureus A9763]
 gi|258420155|ref|ZP_05683110.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9719]
 gi|258437415|ref|ZP_05689399.1| coproporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|258443621|ref|ZP_05691960.1| coproporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|258446828|ref|ZP_05694982.1| coproporphyrinogen oxidase [Staphylococcus aureus A6300]
 gi|258448742|ref|ZP_05696854.1| coproporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|282893084|ref|ZP_06301318.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8117]
 gi|282928216|ref|ZP_06335821.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A10102]
 gi|295406706|ref|ZP_06816511.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8819]
 gi|297245712|ref|ZP_06929577.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8796]
 gi|253724025|gb|EES92754.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257787631|gb|EEV25971.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9781]
 gi|257840191|gb|EEV64655.1| coproporphyrinogen oxidase [Staphylococcus aureus A9763]
 gi|257843866|gb|EEV68260.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9719]
 gi|257848620|gb|EEV72608.1| coproporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|257851027|gb|EEV74970.1| coproporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|257854403|gb|EEV77352.1| coproporphyrinogen oxidase [Staphylococcus aureus A6300]
 gi|257858020|gb|EEV80909.1| coproporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|282590023|gb|EFB95105.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A10102]
 gi|282764402|gb|EFC04528.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8117]
 gi|294968453|gb|EFG44477.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8819]
 gi|297177363|gb|EFH36615.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A8796]
 gi|329727212|gb|EGG63668.1| putative coproporphyrinogen dehydrogenase [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 385

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDA 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 364 IALTKRGKVIGNEVFEAFLI 383


>gi|150002626|ref|YP_001297370.1| coproporphyrinogen III oxidase [Bacteroides vulgatus ATCC 8482]
 gi|294776094|ref|ZP_06741587.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides vulgatus PC510]
 gi|149931050|gb|ABR37748.1| coproporphyrinogen III oxidase [Bacteroides vulgatus ATCC 8482]
 gi|294450045|gb|EFG18552.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides vulgatus PC510]
          Length = 376

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 190/379 (50%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R  +  +  +I++   E+           I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTRSEQ--KTAYIRALCRELTDREAYLEGEHIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V  + EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVIPDAEITLEANPDDLTPEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R H A +AI A    R   F  +S DL+Y LP +T+  W+ +L++AL+  
Sbjct: 121 FQDSTLKLLQRRHTAEQAIRAFQNCRTAGFRNISIDLMYGLPGETLASWKEDLKQALALH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +++ +   L    E+++V L+       +A G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTTLWQLREQHKLEEADEDLSVSLFGTLIDSLTAAGYEHYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS           S+ ++          NG+   E 
Sbjct: 241 PGFHSRHNSSYWTEKKYLGCGPSAHSYNGTSRQWNVASLNEYIRGI-----SNGNPTFEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L    + ++F++  +R + G+ +       G  L   C R      +QG +E ++   
Sbjct: 296 EELDLYTRYNDFVITHIRTQWGMPLPKLRKQYGEELYKYCLRMATPHLQQGTLE-IKNDT 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D +++++ 
Sbjct: 355 LKLTRKGVFISDGIMSDML 373


>gi|71065781|ref|YP_264508.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter arcticus
           273-4]
 gi|71038766|gb|AAZ19074.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter arcticus
           273-4]
          Length = 441

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 134/431 (31%), Positives = 212/431 (49%), Gaps = 45/431 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQ 60
           L    +N        L +Y+H P+CVKKCPYCDFNSH   V       + ++ + L +  
Sbjct: 16  LHDAHSNAIEVKDIPLALYIHIPWCVKKCPYCDFNSHELPVDGQLSMYDEYVDALLQDAA 75

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             + LT  R I SIF GGGTPSL+       + DG+ K +  +S++EIT+EANP ++E  
Sbjct: 76  MQQILTQGREIGSIFIGGGTPSLLPIAQYQRLFDGLQKYYEFASDIEITMEANPGTLEHA 135

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
            F  Y + G+NR+S+GVQS   + L  LGR HN  +A++AI  AR   F R++ DL++ L
Sbjct: 136 PFVEYLEVGINRLSIGVQSFSAEQLTTLGRIHNPIQALSAIKAARAAGFERVNVDLMHGL 195

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT ++   ++Q A +    H+S YQLTIE  T+FY+       VLP E+   D+    
Sbjct: 196 PEQTRSEALDDIQMAHNAGATHISWYQLTIEPNTVFYR----SQPVLPDEDRLADIEEAG 251

Query: 240 QSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV----- 293
           Q +    G H YE+S  S        HN+NYW++GDY+ IG GAH +V V    +     
Sbjct: 252 QILLQNLGYHNYEVSAWSGAADKPCRHNVNYWQFGDYLAIGAGAHGKVTVREGVIDNKVS 311

Query: 294 --------------------AISIEKHPESWLKMVRKNGHA--------VVEKEFLSSEQ 325
                                 S  + P+ +++    +           ++  + +  ++
Sbjct: 312 HEMTANILINDEENKQAGIYRFSKSRMPKDYMEYQEAHQPDRALTPAPKMIGWQAIDQDE 371

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGM 383
              EF++  LRL +G++   +E   G + D    +   L  QG +      +L+ T+ G 
Sbjct: 372 LISEFMLNALRLHDGVTWSLFETRTGLSYDSVTIQVTQLIEQGLLT-DSLEQLQPTELGK 430

Query: 384 TMLDSVIANLA 394
             L+ ++    
Sbjct: 431 RYLNQILRAFL 441


>gi|258424011|ref|ZP_05686893.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9635]
 gi|257845632|gb|EEV69664.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9635]
          Length = 385

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +  A++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYASVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|313888919|ref|ZP_07822579.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845092|gb|EFR32493.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 379

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 116/385 (30%), Positives = 193/385 (50%), Gaps = 13/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +N + +Y+H PFC  +C YCDF S +       E + +    E++        R I ++
Sbjct: 2   KTNKISIYIHIPFCESRCHYCDFCSSLLSEP-KVEKYFKYLRKEIKLHEDFLRDRIIDTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS ++ + I  I+D +   +  S N EI+IE+NP+S+       Y   G+NRIS
Sbjct: 61  FIGGGTPSSVDSRFIKEIMDDL-SAYNFSDNREISIESNPNSLTREKAVAYFSYGINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G QS  E+ L+ +GR H   +   AI  AR+  F  ++ DL+ ALP Q  +  E  ++ 
Sbjct: 120 IGTQSFNEEILKRIGRIHKKDDIYRAIENARSAGFENINLDLMLALPGQKFSDIEESIKE 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + H+S Y L +E+GT  ++ H+   L  P+E+    +Y+         GL  YEI
Sbjct: 180 VRELNLSHISYYSLILEEGTKLFRDHEKSPLSFPTEDEDRKMYHYVVDELKKIGLKQYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN+ YW+  DYI  G  A S ++   +  + +     + + + + KN +
Sbjct: 240 SNFAKEGHECRHNMAYWKLRDYISFGLSASSNIRNLRYTNSYNF----KDYYEALDKNEN 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIE 369
            +   E LS   + +EF+MMGLRL  G  + ++            D E E+NL+    + 
Sbjct: 296 PIGFSENLSKTNRMNEFVMMGLRLNSGFDLDEFNEKFNEEFLKIYDKEIEKNLKSN--LI 353

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            ++ + LR T++G  + + V  +  
Sbjct: 354 LLEDNNLRLTKKGRDLSNQVELDFF 378


>gi|291007478|ref|ZP_06565451.1| coproporphyrinogen III oxidase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 378

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 184/385 (47%), Gaps = 21/385 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLT--GPRSI---SS 73
           YVH PFC  +C YCDFN++         G  ++++    E+    ++   G   +    +
Sbjct: 2   YVHVPFCATRCGYCDFNTYTADELGSSAGFGSWLEGLRAELDLGARVLAAGGEPVPAAGT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSL+  + +  +LD +  ++ ++   E+T E+NP S     F+G   AG  R+
Sbjct: 62  VFAGGGTPSLLGAERLGEVLDAVRSSFGLADGAEVTTESNPESTSPEFFEGIAAAGYTRV 121

Query: 134 SLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+QS  +  LR L R H       AA       F  ++ DLIY  P +T       L 
Sbjct: 122 SLGMQSAAQHVLRVLERRHTPGRAVEAAREARAAGFGHVNLDLIYGTPGETDDDLRASLD 181

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L   VDH+S Y L +E GT   +  + GDL +P E+V  D Y L   +    GLH YE
Sbjct: 182 AVLEAGVDHVSAYSLIVEDGTAMARKVRRGDLPMPDEDVLADRYELLDGVLGGAGLHWYE 241

Query: 253 ISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           +SN +    A  +HN+ YWR GD+ G GPGAHS V      V     KHP  +  ++ + 
Sbjct: 242 VSNWARDDAARCMHNIGYWRGGDWWGAGPGAHSHVGG----VRWWNVKHPARYSALLAEG 297

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI--E 369
               + +E L +E Q  E +M+ LRL  G+ +   +  AGR       +     G +  +
Sbjct: 298 ASPALAREVLDAEDQRIERVMLELRLASGLPLAVLDE-AGR----LAAKEAVADGLLRAD 352

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            +   R   T RG  + D VI  L 
Sbjct: 353 ALAADRCVLTDRGRLLADGVIQRLI 377


>gi|29347578|ref|NP_811081.1| coproporphyrinogen III oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572038|ref|ZP_04849442.1| coproporphyrinogen III oxidase [Bacteroides sp. 1_1_6]
 gi|29339479|gb|AAO77275.1| coproporphyrinogen III oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251838218|gb|EES66305.1| coproporphyrinogen III oxidase [Bacteroides sp. 1_1_6]
          Length = 376

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 185/379 (48%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     + +++ +   E++  ++      + +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTHYVHTLCRELEMRKEYLKGEPVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E  +   I + I +N+ +    EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEEADFKHIFETIRENYGMEHCREITLEANPDDLSQEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R H++  A+ A+   R   F  +S DLIY LP +T  +W  +L++A+   
Sbjct: 121 FDDTTLQLLKRRHSSQTAVEAVRRCREAGFQNISIDLIYGLPGETKERWVNDLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT E+ T  Y M K   +    E+ ++  + L        G   YEISN   
Sbjct: 181 VEHISAYHLTYEEDTPIYNMLKQHQIEEVDEDSSLQFFTLLIEHLQNAGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN +YWR   Y+G GP AHS           SI+ + +       +      E 
Sbjct: 241 PDKYSRHNTSYWRGIPYLGCGPSAHSFNGTTREWNVSSIDLYIKGI-----EGNQRDFET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L    + +EF++  +R   G  ++  +   G  L   C +        G +E +    
Sbjct: 296 ENLDQTTRYNEFIITTIRTVWGTPIEKLKQEFGNELWEYCRKMSAPYLENGKLE-IHEGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|68535671|ref|YP_250376.1| coproporphyrinogen III oxidase [Corynebacterium jeikeium K411]
 gi|68263270|emb|CAI36758.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           jeikeium K411]
          Length = 409

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 41/410 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----------FIQSFLTEMQWMRQ-LTGP 68
           G+Y+H PFC  +C YCDFN++  +     +           ++ +   E++   +    P
Sbjct: 3   GLYIHVPFCSTRCGYCDFNTYTPQELSAADGGAVEGNTIPGYLDALERELEVAAEVWDYP 62

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPS++  + +A  L+   +   +++N E+T EANP S     F G R+A
Sbjct: 63  GEVQTVFFGGGTPSMLGHEGLARALNAARRTVGLAANAEVTTEANPESTSPEFFAGLREA 122

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRISLG+QS     L+ L R H     I A   A+   F  ++ D+IY  P +T    
Sbjct: 123 GFNRISLGMQSAMGHVLKVLERQHTPGRPIEATREAKRAGFEHINLDVIYGTPTETDDDL 182

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   L   VDH+S Y L +E GT   +  + G+L  P E+   D Y+   +     G
Sbjct: 183 RRTLDAVLEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDTLADRYDAIDARLRDAG 242

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR------VAISIEKHP 301
            + YE+SN +  G E  HNL YWR G + G GPGAH  V++          V +   K P
Sbjct: 243 FNWYEVSNWAKPGGECQHNLIYWRSGQWWGAGPGAHGCVRLRGEGHSESGLVRLVNAKRP 302

Query: 302 ESWLKMV---------RKNGHA----VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            ++   +          K+G      VV  E L+++    E +M+ LRL EG+       
Sbjct: 303 ATYWDGLLGEAEGASTGKDGLPVPGSVVTTERLTNDDLRTEQVMLQLRLAEGL------K 356

Query: 349 LAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           L G + + E  + ++R    G +++    RLR T +G  + D ++ ++ +
Sbjct: 357 LVGSDENAELAQVIERYTGLGLLDK-HGERLRLTDKGRYLADGIVTDIVL 405


>gi|317479696|ref|ZP_07938819.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
 gi|316904149|gb|EFV25980.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
          Length = 376

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 193/380 (50%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     ++ +I++  TE++  +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTRSEL--KQQYIRALCTELKTRKGYLKEEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I + +      EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAHEDFEQIFRTIKEVYGTEHAEEITLEANPDDLTEEYVSMLRTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  +L+ L R HNA++AIAAIH  R   F  +S DLIY LP +T  +WE +LQ+A+   
Sbjct: 121 FDAPTLKLLNRRHNAAQAIAAIHRLRQAGFRNISIDLIYGLPDETDQRWERDLQQAVGLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  ++  ++       A G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTRIYEMLQSHRISEVDEESSLRFFSALMDTLGAAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G GP AHS           S     E ++K + + GH   E 
Sbjct: 241 PGMYSRHNTAYWKGIPYLGCGPSAHSFNAETREWNTAS----LEGYIKSIEE-GHRSSET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERVQFS 374
           E L    + +E++M  LR   GIS+   E   G  L   C +     LQ       +Q  
Sbjct: 296 EILDKVTRYNEYIMTSLRTMWGISLTYTEEAFGTELCQYCTKMAAPYLQSHKL--EMQAD 353

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T+ G+ + D +I++L 
Sbjct: 354 RLRLTREGIFVSDGIISDLM 373


>gi|160872485|ref|ZP_02062617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsiella grylli]
 gi|159121284|gb|EDP46622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rickettsiella grylli]
          Length = 391

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 209/383 (54%), Gaps = 14/383 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+C++KCPYCDFNSH     + ++N++   L +++   +    R I SIF G
Sbjct: 18  PLSLYIHFPWCIRKCPYCDFNSHTLVTALPEKNYMNRMLNDLEQDLEKICNRPILSIFMG 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P+ +  +L  +AK    S ++EIT+EANP + + ++F GYR+AG+ R+SLG+
Sbjct: 78  GGTPSLFSPEALNYLLTELAKRLEFSVDIEITLEANPGATDYSHFSGYREAGITRLSLGI 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR HN  EA  A+  A    F  ++ DL++ LP+Q +T+   +L++A+ 
Sbjct: 138 QSFSTEKLKILGRIHNGDEAFKAVSAAKIAGFTNINLDLMHGLPQQRLTEGLEDLRKAVL 197

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T FY         LP+E    +L    +          YEIS  
Sbjct: 198 LEPTHISWYQLTVEPNTEFYLKPP----QLPTEEEVWELQEKGKEYFQQKAYTQYEISAL 253

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE--KHPESWLKMVRKNGHA 314
           S      +HNLNYW++GDYIGIG GAHS++     ++       K+P+++L   +KN   
Sbjct: 254 SKKRYRCVHNLNYWQFGDYIGIGAGAHSKITDCEKKIIRRTRKLKNPKAYLA--QKNDFL 311

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
             EK  L  +    EF++  LRL + I ++ ++   G          ++   QG +    
Sbjct: 312 AEEKIILD-KDLPFEFMLNALRLHQKIPIELFQQRTGLTFSSIEALLQHAYDQGLLT-YD 369

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            + +  T+ G    +++++ L +
Sbjct: 370 STVIETTELGKRFYNNLVS-LFI 391


>gi|163787295|ref|ZP_02181742.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteriales bacterium ALC-1]
 gi|159877183|gb|EDP71240.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteriales bacterium ALC-1]
          Length = 377

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 116/378 (30%), Positives = 185/378 (48%), Gaps = 11/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +++ I +   E++  +      ++ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKKKDDLINALSKELELRKDDFKKTTVKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    +  I++ + KN+ VS + EIT+EANP  +  +         +NR+S+G+QS
Sbjct: 61  TPSLLTNDELQYIINSVYKNYKVSEDPEITLEANPDDLSKDRIIDLAHTPINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L+ + R HNA EA   +++A   F  +S DLIY +P  +  QW   ++ ALSY V
Sbjct: 121 FFEADLKLMNRAHNAKEAKECLYVATQYFDNISLDLIYGIPGASNEQWLANIEMALSYNV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T      K G +    +  A + + + +    A     YE+SN    
Sbjct: 181 PHISSYALTVEPKTALAAFIKKGIIEDVDDEQAHEQFYILKEKLEASDFVHYELSNFGKD 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW+   YIGIGP AHS           +  K    ++K +++N   + E E
Sbjct: 241 GFFSKNNSAYWKGKSYIGIGPSAHSFNGKQRGWNVSNNSK----YIKAIQQNELPI-EIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSRL 376
            L++  Q +E++M GLR   G+S    E   G                Q  +  +    L
Sbjct: 296 TLTTTDQYNEYIMTGLRTIWGVSFVKVENDFGTTFKDYLIEQSEVFINQHLL-YIDDEHL 354

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T++G  + D + + L 
Sbjct: 355 RVTKKGQFLSDGIASELF 372


>gi|15924573|ref|NP_372107.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927163|ref|NP_374696.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283264|ref|NP_646352.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486418|ref|YP_043639.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|148268067|ref|YP_001247010.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394135|ref|YP_001316810.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156979901|ref|YP_001442160.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316058|ref|ZP_04839271.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255006369|ref|ZP_05144970.2| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|258453559|ref|ZP_05701537.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus A5937]
 gi|269203211|ref|YP_003282480.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|296275795|ref|ZP_06858302.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297207698|ref|ZP_06924133.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911779|ref|ZP_07129222.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|13701381|dbj|BAB42675.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus N315]
 gi|14247354|dbj|BAB57745.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21204704|dbj|BAB95400.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49244861|emb|CAG43322.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MSSA476]
 gi|147741136|gb|ABQ49434.1| coproporphyrinogen III oxidase, anaerobic [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946587|gb|ABR52523.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus JH1]
 gi|156722036|dbj|BAF78453.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|257864290|gb|EEV87040.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus A5937]
 gi|262075501|gb|ACY11474.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|285817265|gb|ADC37752.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent, in heat shock gene cluster
           [Staphylococcus aureus 04-02981]
 gi|296887715|gb|EFH26613.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300886025|gb|EFK81227.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|312829971|emb|CBX34813.1| oxygen-independent coproporphyrinogen III oxidase 1
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129862|gb|EFT85852.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           CGS03]
          Length = 374

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDA 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 IALTKRGKVIGNEVFEAFLI 372


>gi|237712438|ref|ZP_04542919.1| coproporphyrinogen III oxidase [Bacteroides sp. 9_1_42FAA]
 gi|229453759|gb|EEO59480.1| coproporphyrinogen III oxidase [Bacteroides sp. 9_1_42FAA]
          Length = 376

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 116/379 (30%), Positives = 194/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF S  R+ +  +  +I++   E+   +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKKRCIYCDFFSTTRKEQ--KTAYIRALCHELTDRKDYLKGEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I K + V+ N EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAKEDFEAIFSHIYKVYKVTPNAEITLEANPDDLTSEYISMLRTFPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +L+ L R H A +AI A        F  +S DL+Y LP +T+T W+ +L++ALS  
Sbjct: 121 FQETTLKQLQRRHTADQAIRAFQGCRTAGFQNISIDLMYGLPGETLTSWKKDLKQALSLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E+++V L+       +  G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHKVEEADEDLSVSLFGTLIDELTTAGYEHYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   +       S++K+ E        +G+   E 
Sbjct: 241 PGLHSRHNSSYWTEKQYLGCGPSAHSYNGISRQWNVASLDKYIEGI-----SSGNPTFEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L    + ++F++  +R + G+ +       G  L   C        +QG +E ++   
Sbjct: 296 EELDLYTRYNDFVITHIRTQWGMPLPKLGKQYGEELYKYCLHMATPHLQQGTLE-IKNDT 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D +++++ 
Sbjct: 355 LKLTRKGVFISDGIMSDML 373


>gi|298207568|ref|YP_003715747.1| coproporphyrinogen III oxidase [Croceibacter atlanticus HTCC2559]
 gi|83850204|gb|EAP88072.1| coproporphyrinogen III oxidase [Croceibacter atlanticus HTCC2559]
          Length = 376

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 113/379 (29%), Positives = 185/379 (48%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF  H       ++  + +  TE+   R++    ++  I+FGGG
Sbjct: 3   SIYIHIPFCKQACHYCDF--HFSTSLKKKDELVNTLKTELSL-RKVELTNTVECIYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + +  +++ +  N+ VS   EIT+EANP  +  +      K+ +NR+S+G+QS
Sbjct: 60  TPSLLSAEELNSLIETVYTNYNVSETPEITLEANPDDLTKDKITELGKSKINRLSIGIQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L+ + R HNA EA+  I  ++  F  +S DLIY +P  T  +W+  L  AL   +
Sbjct: 120 FFEDDLKLMNRAHNAKEALQCIEFSKTEFDNISIDLIYGVPGMTTQKWKENLNIALQLDI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   +  + G +    +++A   +++        G   YE SN    
Sbjct: 180 PHISSYALTVEPNTALKRFIEKGVVPPVDDDLAKQHFDILVETLQQAGYSNYEFSNFGKQ 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW    Y+GIGP AHS           +  K    ++K +++      E E
Sbjct: 240 GYHSNNNTAYWTGKSYLGIGPSAHSYNGKQRSWNINNNPK----YIKSIQQGIIP-NEVE 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSR 375
            LS   + +E++M GLR   GIS+   E   G N      +  Q + FIE     +    
Sbjct: 295 TLSVTDRYNEYVMTGLRTIWGISLSKIEKEFGLNFKTYVLQ--QAKYFIEDHLLFLDGDT 352

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T++G  + D + + L 
Sbjct: 353 IIVTKKGKFLSDGIASELF 371


>gi|317486851|ref|ZP_07945663.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
 gi|316921890|gb|EFV43164.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
          Length = 381

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 194/380 (51%), Gaps = 15/380 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC +KC YC F S+   R       ++ +   E+    +  G   + S+FFGGG
Sbjct: 3   LYIHVPFCRRKCRYCAFYSNPLARSGDEMAVYLSALYAELGQWGRRLGRVPVESVFFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQ 138
           TPSL++P  +  +LD + + + V    EI++EANP S+       G+  AGVNRISLGVQ
Sbjct: 63  TPSLLDPDQLEGVLDCVGRTFEVLPGAEISMEANPDSLHTAEKASGFLAAGVNRISLGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL +  L  LGR H A+ A  A    R      +S DL++ LP QT+ QW  + + A++ 
Sbjct: 123 SLHDGMLETLGRLHRANAAREAFRAIREAGCANLSLDLMWGLPGQTLEQWLEDARAAIAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y LT+E GT   +    GD  LPSE+V   +Y     +    GLH YE+SN +
Sbjct: 183 GPEHISAYGLTLEPGTPLAE--SCGDAELPSEDVQCAMYLEGIRLFEEAGLHHYEVSNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNL YW   DY+G+GP A S +               E WL+ VR+      E
Sbjct: 241 RDGFRCRHNLGYWEGRDYLGVGPAATSTIGGERWTNPEG-----EGWLEQVREGRRCP-E 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFS 374
            E L    +A E +M+ LR  +G+ +  +E LAGR+   +       L  +G   R++  
Sbjct: 295 WEPLDRATRALELMMLRLRTVDGLPLDAYESLAGRSFLGDHGPFAHRLCAEGL-ARMENG 353

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             R T  GM + +S++  L 
Sbjct: 354 VFRLTDEGMLVSNSILGELF 373


>gi|330686126|gb|EGG97747.1| putative coproporphyrinogen dehydrogenase [Staphylococcus
           epidermidis VCU121]
          Length = 377

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + ++ + + EM+  R       + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-DKQPVDEYLDALILEMER-RTQNANTKLKTMYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +   L  I + +T+    E + EANP  +     +  +  GVNR+S+GVQ+
Sbjct: 63  TPTALNIDQLNKFLSAINRIFTIEG--EFSFEANPDELTFEKVKLLKAFGVNRVSMGVQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR H   +   A+  AR+     +S DL+Y LP+QT+  +E  L  A+   
Sbjct: 121 FKPELLEILGRTHKTEDIYDAVRNARDAGIESISLDLMYHLPQQTLEDFEKSLNLAMKMD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  ++Y            H YEISN + 
Sbjct: 181 IDHISSYGLILEPKTQFYNMYRKGHLKLPNEDLGAEMYQTLMHKIEDSKFHQYEISNFAI 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA        +     +      ++K +      ++ +
Sbjct: 241 EGHESEHNKVYWLNEEYYGFGAGASGYTNGVRYTNVNPVN----HYIKAIANQEEPILTE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              ++ +Q +E + +GLRL  G++   +       +D    +    L+ +  IE  Q   
Sbjct: 297 TRPTTNEQMEEEMFLGLRLNCGVNKNKFNEKFNTTIDRIFGQTIIELKNRKLIEETQ-DY 355

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 356 IYLTERGKVIGNEVFEAFLL 375


>gi|254881409|ref|ZP_05254119.1| coproporphyrinogen III oxidase [Bacteroides sp. 4_3_47FAA]
 gi|319642796|ref|ZP_07997434.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_1_40A]
 gi|254834202|gb|EET14511.1| coproporphyrinogen III oxidase [Bacteroides sp. 4_3_47FAA]
 gi|317385540|gb|EFV66481.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_1_40A]
          Length = 376

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 200/379 (52%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S        +  +I +  +E++  ++  G  +I +I++GGG
Sbjct: 3   GIYLHVPFCKRRCIYCDFFS--TTQSERKTAYIHAVCSELEMRKEYLGGETIETIYWGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   I   + KN+++SS+ EIT+EANP  +  +     R    NR+S+G+Q+
Sbjct: 61  TPSQLDKEDFETIFYYLHKNYSISSHPEITLEANPDDLTPDYIAMLRTLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L+ L R H A +AI A    R   F  +S DL+Y LP +T++ W+ +L +AL   
Sbjct: 121 FNESILKVLQRRHTARQAIEAFQNCRAAGFQNISIDLMYGLPGETLSTWQQDLDQALLLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L  E+ T+ +K+ +   +    E+++V L++      ++ G   YEISN S 
Sbjct: 181 PEHLSAYHLIYEEDTVLWKLREQHKVEEADEDLSVSLFSTLIDRLTSEGYDHYEISNFSL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   V       S     ++++K +   G  V E 
Sbjct: 241 PGLYSRHNSSYWTEKKYLGCGPSAHSYNGVSRQWNVAS----LDTYIKGISA-GTPVFEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++  +R   G+ +       G  L   C R      +QG +E V    
Sbjct: 296 EELDLYTRYNDFVITRIRTEWGMPLSKLRDEFGEKLYDYCLRMAAPHLKQGTLELV-NDI 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D +++++ 
Sbjct: 355 LKLTRKGIFISDGIMSDML 373


>gi|197301866|ref|ZP_03166935.1| hypothetical protein RUMLAC_00592 [Ruminococcus lactaris ATCC
           29176]
 gi|197299096|gb|EDY33627.1| hypothetical protein RUMLAC_00592 [Ruminococcus lactaris ATCC
           29176]
          Length = 390

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 123/394 (31%), Positives = 206/394 (52%), Gaps = 15/394 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +Y+H PFCVKKC YCDF S     +  QE ++Q+ + E++  +       
Sbjct: 1   MNNMKKRDLELYLHIPFCVKKCNYCDFFSAAGSREE-QEAYVQAMIQEIRGYKDSLHSYE 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPSL+  +    +   +  ++T+  + EIT+E NP +V +   + Y+ AGV
Sbjct: 60  VKTVFLGGGTPSLLSERQAEELFQSLYDSFTIQKDAEITMEVNPGTVNLEKLKQYKAAGV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+SLG+QS   + L+ LGR H   + +A  +      F   + DL+  LP QTM  WE 
Sbjct: 120 NRLSLGLQSARNEELQRLGRIHTYEDFLATWNFTEKAGFENRNIDLMSELPGQTMESWED 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD-----GDLVLPSENVAVDLYNLTQSITS 244
            L++ ++   +H+S Y L +E+GT FY  +++     G+  LPSE     +   T    +
Sbjct: 180 TLEKVIALEPEHISAYSLILEEGTRFYHWYQEGKFDSGEWKLPSEEEEYRMGEWTIERLA 239

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G+  YEISN++  G E  HNL YW   +Y+GIG GA S +         S  ++ +++
Sbjct: 240 KAGMERYEISNYARTGQECRHNLGYWDRVEYLGIGAGASSLL----RNRRFSHIRNRKTY 295

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERN 361
           ++ + +      E+E LS E Q +EF+ +GLR   GIS + +E    + +         +
Sbjct: 296 IEAIHEKQPIETEEELLSEESQMEEFMYLGLRKVNGISKEKFERTFQKPISEVYGTVIEH 355

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            Q +  +E  +  R+  ++RGM + + V+A   +
Sbjct: 356 FQAEHLLE-CKGDRIFLSRRGMDVSNYVLAEFLL 388


>gi|222054203|ref|YP_002536565.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           FRC-32]
 gi|221563492|gb|ACM19464.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           FRC-32]
          Length = 387

 Score =  329 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 11/384 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
            + +Y+H+PFC+KKC YCDF+S V    V  + ++ + + EM+    +L  P S  +++F
Sbjct: 8   HVSLYIHFPFCLKKCLYCDFDS-VAGSLVSPDEYVAAVVREMELRAAKLAAPVSAPTLYF 66

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ PQ +  I+D  A+ + ++S+ EITIEANP +V      GYR AG+NR+SLG
Sbjct: 67  GGGTPSLMAPQLVGRIIDTAARLYGLNSDGEITIEANPGTVTAEKLAGYRAAGINRLSLG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+L++  L+ LGR H+  E++AA   AR   F  +  DLI++LP Q++T WE  L  A+
Sbjct: 127 VQALDDALLQQLGRVHSVEESLAAYKAARKVGFDNIGIDLIHSLPGQSLTMWEKALDEAI 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L++E+GT F  M + GDL LP E+ A  ++  T+ + + HG   YEISN
Sbjct: 187 RLGPEHISAYSLSVEEGTPFAAMFEAGDLSLPHEDEATAMFEATRYLLALHGYEHYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +     S HN  YWR G+Y+G G GAHS ++     +     ++  ++L  ++++    
Sbjct: 247 FARPLFRSRHNQVYWRRGNYLGFGAGAHSFLREPGWGLRWVNPRNHTAYLAAMQQDHLQE 306

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQ 372
            E + L+      E   +GLRL +GI + D     G  ++ E       L+ +G +  V+
Sbjct: 307 EELQQLARRDALAEVFFLGLRLLKGIDMLDAIEEFGPVVEEEYGGLIGELEVKGLL--VK 364

Query: 373 FSRL--RCTQRGMTMLDSVIANLA 394
             RL      + +   + + ++  
Sbjct: 365 SGRLIAIPPDK-IIFANQIFSSFI 387


>gi|225027588|ref|ZP_03716780.1| hypothetical protein EUBHAL_01845 [Eubacterium hallii DSM 3353]
 gi|224955104|gb|EEG36313.1| hypothetical protein EUBHAL_01845 [Eubacterium hallii DSM 3353]
          Length = 385

 Score =  329 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 120/389 (30%), Positives = 201/389 (51%), Gaps = 13/389 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSI 71
                L +Y+H PFC+KKC YCDF S     +  +E ++QS + E++   +L      ++
Sbjct: 3   ASKTDLELYIHIPFCIKKCNYCDFLSFPSNEE-RREIYVQSLINEIEQTGKLLDKDAYAV 61

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SIF GGGTPSL+  + I  I+  +   + +    EIT+E NP ++   N   Y+KAGVN
Sbjct: 62  RSIFIGGGTPSLLSGKQIERIMLAVRNAFFIMEEAEITMETNPGTLTKENVFSYKKAGVN 121

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R S+G+QS ++  L  LGR H   E + +  LAR   F  ++ DL+  LP QT++ +   
Sbjct: 122 RFSMGLQSADDACLHLLGRIHTWEEFLKSYELARKAGFENINVDLMSGLPGQTVSIYRRT 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ ++   +H+S Y L +E+GT F +  +     +P E    ++Y LT+ + + +G   
Sbjct: 182 LEKVMALQPEHISAYSLILEEGTPFGESEEIQK-KIPDEETDREMYQLTKEVLAENGYER 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G E +HNL YW    Y+G G GA S  +        S EK+ E + K    
Sbjct: 241 YEISNYARKGKECIHNLGYWSGIPYLGFGLGASSYFEGTR----FSNEKNLEEYQKKPYV 296

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGF 367
                 +   LS + + +EF+ +GLR R GIS ++++       +++  +     +    
Sbjct: 297 PFMMREDYTVLSEKDEIEEFMFLGLRKRAGISEREFKERFRVGLKDIYGKVIAKYEEMDL 356

Query: 368 IERVQFSR-LRCTQRGMTMLDSVIANLAV 395
           +E     + LR T  G+ + D +  +  +
Sbjct: 357 LEWTADGKMLRLTDAGIDVSDYIFCDFML 385


>gi|291456707|ref|ZP_06596097.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium breve DSM 20213]
 gi|291381984|gb|EFE89502.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium breve DSM 20213]
          Length = 437

 Score =  329 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 124/430 (28%), Positives = 199/430 (46%), Gaps = 57/430 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKSTKQWQLDHGIAEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD I K W ++SN EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAIRKTWGIASNAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 AAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------------------------ 288
           +SN +  G ES HNL YWR  D+ G+GPGAHS                            
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGVGPGAHSHYNNVTEIDRPQSALLTAPASGGTTEAI 303

Query: 289 -----------------GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
                             SH +      HP  W   + ++     + E +++E+  +E +
Sbjct: 304 APAGGGCPAEAGLGVVPVSHGLRSWDIAHPRLWGTAINEHRIPWADSEAITAEENLEELI 363

Query: 332 MMGLRLREGISVKDW-------EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
           M+GLRLREG+ +          E  + + + ++  R +  +G I  +  +R+  T+RG  
Sbjct: 364 MLGLRLREGLDLGRINQAIAANENTSWQTIAVDPLRPMVDEGLIT-ISGNRVIPTRRGRL 422

Query: 385 MLDSVIANLA 394
           + DSVI    
Sbjct: 423 LNDSVIERFF 432


>gi|239626113|ref|ZP_04669144.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520343|gb|EEQ60209.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 413

 Score =  329 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 123/416 (29%), Positives = 206/416 (49%), Gaps = 35/416 (8%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT +    + +YVH PFC +KC YCDF S  R      E +    + E++          
Sbjct: 1   MTSKNKKPMELYVHIPFCARKCLYCDFLSF-RALASVHEAYTAQLIREIEAQGAFCREYQ 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +++IF GGGTPS++EP  IA I+  +  ++ V+ + EITIE NP ++  N    YR+AG+
Sbjct: 60  VTTIFIGGGTPSVMEPCLIADIMRALKYHFDVAEDAEITIEVNPGTLLYNKLHIYREAGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS + + LR LGR H   E + +   AR   F  ++ DL+ ++P QT+  ++ 
Sbjct: 120 NRLSIGLQSTDNRELRDLGRIHTFEEFLKSFQCARMVGFSNINVDLMSSIPGQTLESFKN 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG-----------------------DLVL 226
            L++      +H+S Y L IE+GT F+  +  G                          L
Sbjct: 180 TLKKVAMLKPEHISAYSLIIEEGTPFWDHYGQGAAGGWRSAGQDGKEHPMAADGPAFPPL 239

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E+    +Y+LT++  +  G   YEISN++  G E  HN+ YW    Y+G+G GA S +
Sbjct: 240 PDEDTESRIYHLTRTFLTEQGYGRYEISNYAKPGHECRHNIGYWTEVPYLGLGLGASSYL 299

Query: 287 KVGSHRVAISIEKHP----ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
                     ++ +         + V +  H  +++  LS E + +EF+ +GLRL +G+S
Sbjct: 300 GGCRFSNTSDLDMYLGLDFNRAPEEVLEQLHGPLQE--LSREARMEEFMFLGLRLTKGVS 357

Query: 343 VKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             D+  + G  L+         L   G +E+     +  T+ GM + + V++   +
Sbjct: 358 GIDFVSMFGIKLETVFGPVMERLISDGLLEK-NGVWISLTEWGMDVSNYVLSEFLL 412


>gi|333029256|ref|ZP_08457317.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
 gi|332739853|gb|EGJ70335.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
          Length = 376

 Score =  329 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 197/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S           +I +   E++  +   G   I +I+ GGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTESQLT--SPYINALCKELELRKDYLGNEPIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  I + I K + +S+  EIT+E NP  +  N     R   +NR+S+G+Q+
Sbjct: 61  TPSQLSHAELEKIFNTIKKYYDISNVQEITMEGNPDDLTPNYLSMLRTLPINRLSIGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ L R H + +AI A+  AR   F  +S DL+Y LP +TM++WE ++QRA+   
Sbjct: 121 FQNSMLKKLNRRHTSDQAIQAVKDAREHGFKNISIDLMYGLPYETMSEWENDIQRAIDLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y L  EKGTL YK   +G +    E+ ++  +    +I + +G   YEISN + 
Sbjct: 181 VEHISAYHLIYEKGTLLYKKLIEGFIQEVDEDFSLQSFTKLINILTKNGFIHYEISNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HN +YW    Y+G GP AHS   +       S+      ++  ++ N +   E 
Sbjct: 241 PGKIAQHNTSYWTGKKYLGCGPSAHSYNGLTRAWNVSSLH----QYMIQIKAN-NLNQEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSR 375
           E L    Q +++++  LR   G+S++  +   G        +  ++    G +E ++ + 
Sbjct: 296 ENLDITTQYNDYIITSLRTMWGLSLETLQTKFGETYYNYILKLAKKHINSGNLE-LKNNN 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D ++++L 
Sbjct: 355 LKLTKKGVFISDGIMSDLL 373


>gi|160890876|ref|ZP_02071879.1| hypothetical protein BACUNI_03321 [Bacteroides uniformis ATCC 8492]
 gi|156859875|gb|EDO53306.1| hypothetical protein BACUNI_03321 [Bacteroides uniformis ATCC 8492]
          Length = 376

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 130/380 (34%), Positives = 192/380 (50%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     ++ +I++  TE++  +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTRSEL--KQQYIRALCTELKTRKGYLKEEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I + +      EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAHEDFEQIFRTIKEVYGTEHAEEITLEANPDDLTEEYVSMLRTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  +L+ L R HNA++AI A+H  R   F  +S DLIY LP +T  +WE +LQ+A+   
Sbjct: 121 FDAPTLKLLNRRHNAAQAIVAVHRLRQAGFRNISIDLIYGLPDETDQRWERDLQQAVGLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  +V  ++       A G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTRIYEMLQSHRISEVDEESSVRFFSALMDTLGAAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G GP AHS           S     E ++K + + GH   E 
Sbjct: 241 PGMYSRHNTAYWKGIPYLGCGPSAHSFNAETREWNTAS----LEGYIKSIEE-GHRSSET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERVQFS 374
           E L    + +E++M  LR   GIS+   E   G  L   C +     LQ       +Q  
Sbjct: 296 EILDKVTRYNEYIMTSLRTMWGISLTYTEEAFGTELCQYCTKMAAPYLQSHKL--EMQAD 353

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RLR T+ G+ + D +I++L 
Sbjct: 354 RLRLTREGIFVSDGIISDLM 373


>gi|148657973|ref|YP_001278178.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus sp. RS-1]
 gi|148570083|gb|ABQ92228.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus sp. RS-1]
          Length = 406

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 127/413 (30%), Positives = 189/413 (45%), Gaps = 36/413 (8%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           NN  G       +Y+H PFC ++C YCDFN++    +   E ++ +   E++    L+  
Sbjct: 3   NNQPGADVRH--LYIHIPFCHRRCAYCDFNTYA-NMEDRMEAYVTALCAELRSHAPLSRA 59

Query: 69  RSIS--------------SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
            +                +IF GGGTPS++    +A IL        + S  E+T+E NP
Sbjct: 60  VAPPLPMTADLTRAMLRPTIFLGGGTPSMLPDALMARILSAADAIVPLDS-AEVTVECNP 118

Query: 115 SSV-EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMS 172
            +V   +  +  R  GVNRISLGVQSL + +LR LGR H A+EA A+ + AR   F  ++
Sbjct: 119 GTVLARDYLRALRDLGVNRISLGVQSLHDPTLRVLGRIHTAAEAYASFNDARAAGFESIN 178

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D I+ LP QT+ QWE  L+  +++  DH +LY L +E+ T  Y     G + +P ++V 
Sbjct: 179 LDFIFGLPGQTVEQWEETLREIVTWGADHFALYALILEERTPLYAQVISGRVTVPDDDVT 238

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSF--------LGAESLHNLNYWRYGDYIGIGPGAHS 284
             +Y       +A G   YEISN +               HNL YW   DY+  G GAH 
Sbjct: 239 AVMYECALEHFAAAGYVQYEISNWARTDDPSSPVPTHACHHNLAYWLNADYLAAGAGAHG 298

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                 +   + I    + ++  V      V E   L+    A E + MGLRL  G+S  
Sbjct: 299 HRYPQRYVNVMGI----DDYIARVSAGESPVAEITALTPRDLAAETMFMGLRLNVGVSAT 354

Query: 345 DWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +    G  +D         L   G IER +   +R T RG  + + V     
Sbjct: 355 HFRDRCGVEMDAVFGAELAELAELGLIERDERG-VRLTSRGRMIGNRVFERFV 406


>gi|313890049|ref|ZP_07823684.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121410|gb|EFR44514.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 376

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 200/384 (52%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   + ++Q+ + E +        + + +++
Sbjct: 3   KKPSSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIAEFRSY----QIKHLKTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ I  Q +  +L  + ++  +++  E TIEANP  ++       +K+ VNR+SL
Sbjct: 58  IGGGTPTAISAQQLDYLLTELTRDLDLANLEEFTIEANPGDLDAEKIAVLQKSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+HN ++    I  L    F  +S DLIYALP QT+ Q +  + +A
Sbjct: 118 GVQTFNDKHLKQIGRSHNEAQIYETIDSLKAAGFHNISIDLIYALPGQTLEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++  + HLSLY L +E  T+F    + G L LP+E++  ++++       AHG   YEIS
Sbjct: 178 VALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQEMEAHGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G  S HNL YW   +Y G G GA   +    +R  + I    + +LK V+  G+A
Sbjct: 238 NFGKPGYYSQHNLMYWNNDEYYGCGAGASGYLDGMRYRNRVPI----QHYLKAVQA-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERV 371
            + +E L+ E+  +E L +GLR + G+S+  +E            R    L  QG +   
Sbjct: 293 RLTEEVLTLEEMMEEELFLGLRKKTGVSIAQFEAKFPFTFKERYGRIVEELVAQGLLV-D 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              R+R T+RG+ + DSV     +
Sbjct: 352 DPQRVRMTRRGLFLGDSVAEKFIL 375


>gi|114567101|ref|YP_754255.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114338036|gb|ABI68884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 381

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 194/385 (50%), Gaps = 10/385 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               +G+Y+H PFC+KKC YCDF S   +     +++  +   E++ +  L     I SI
Sbjct: 2   KKKPVGLYIHIPFCLKKCGYCDFYSLPLQSPAQLQSYTDAIRLEIEKLATLFSDSIILSI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+  + +  I++ +A N+ VSSN EI++E NP++      +G   AGVNRIS
Sbjct: 62  YLGGGTPSLLGLEQLQSIVEAVAYNFNVSSNAEISLEMNPATRREGFLRGILAAGVNRIS 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS   + LR LGR H   E + +I           + DLIY +P Q++  W+  L+ 
Sbjct: 122 LGIQSFSPEELRVLGRVHGYYEIMQSIEALHKEGCQNFNLDLIYGIPGQSLESWQRSLEL 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+S    H+S Y L +++ T   +  +   + L  E     +Y++        G   YE+
Sbjct: 182 AVSCGPQHISAYLLQLDESTAMARAIESAQIELLDEESENAMYHMALDYLPEKGFRHYEL 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G E  HNLNYW   DYIGIG GA S +    +R         + +L  +     
Sbjct: 242 SNFCQAGFECRHNLNYWCGRDYIGIGAGAVSCIGRQRYRNRP----FLKEYLMSLEVGQE 297

Query: 314 AVVEK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIE 369
           A VE  E +S+E++  E +++ LRL +GI +  +      +          + +++G + 
Sbjct: 298 APVEILEQMSAEEKMREEIILALRLCDGIDLAQFAARYQLDFRERFAVEIEDAEQKGLL- 356

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           +++ +RL  T+RG  + + V     
Sbjct: 357 KLENNRLCLTRRGYFLSNQVFCRFI 381


>gi|238022474|ref|ZP_04602900.1| hypothetical protein GCWU000324_02382 [Kingella oralis ATCC 51147]
 gi|237867088|gb|EEP68130.1| hypothetical protein GCWU000324_02382 [Kingella oralis ATCC 51147]
          Length = 392

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 205/380 (53%), Gaps = 7/380 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH  +  + + ++IQ+ + +++        R I +IF G
Sbjct: 17  PLSLYIHIPWCIQKCPYCDFNSHKIKTTLDERSYIQALIADLETELPHIWGRPIETIFIG 76

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS+   Q I  +L  I     +    EIT+EANP + E   FQG+++AG+NR+S+GV
Sbjct: 77  GGTPSVFSAQAIDSLLSAIRARVKIQPEAEITLEANPGTFEREKFQGFKEAGINRLSIGV 136

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +  L  +GR HNA+EA AAI  A  IF R++ DL+YALP QT  Q + + Q A+++
Sbjct: 137 QSFNDAHLAAIGRIHNAAEAHAAIAAAVQIFERVNIDLMYALPHQTPAQAQADAQAAIAH 196

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F          +P    A D+ +   +  +A G   YE S  +
Sbjct: 197 GTTHISAYHLTLEPNTPFGHTPPQ---GIPDSESAQDIEDAVHAALAAAGYAQYETSAFA 253

Query: 258 -FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                 + HNLNYW++GDYIGIG GAH ++   SH    S  +HP  +L  ++    A +
Sbjct: 254 TAPSQRARHNLNYWQFGDYIGIGAGAHGKISYHSHIERTSRSRHPSEYLAAMQTQPEAAI 313

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFS 374
            ++ ++++  A EF+M  LRL +G+         G N        +  Q++G ++     
Sbjct: 314 RRQPIAAQDLAGEFMMNALRLIDGVPSAFLPERTGINAAQISRAIQTAQQKGLLDGNPL- 372

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             R T  G   L+ +I    
Sbjct: 373 YFRPTPLGQRFLNDLIGLFL 392


>gi|319899915|ref|YP_004159643.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
 gi|319414946|gb|ADV42057.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
          Length = 377

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 116/379 (30%), Positives = 192/379 (50%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S    +   ++ +I +   E+Q  +      ++ +++FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYS--TTHSELKQRYIHALCQELQNRKDYLKGEAVETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I + I +   + + +EIT+EANP  +        +    NRIS+G+Q+
Sbjct: 61  TPSQLTEEDFIQIFNTIKEICGLENAIEITLEANPDDLTEEYVSMLQTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +L+ L R HN+++A  AI   R   F  +S DLIY LP +T  +W+ +LQ+A+   
Sbjct: 121 FDDPTLKLLNRRHNSAQATTAIERCRQADFHNISIDLIYGLPGETDKRWKHDLQQAVGLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  +V  +         +G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTPIYEMLQTCHIREVDEESSVRFFTTLTETLVENGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YWR   Y+G GP AHS  +        S+  +  S      + GH   E 
Sbjct: 241 PGMYSRHNTSYWRGIPYLGCGPSAHSFNRETREWNVSSLTTYISSI-----EEGHRSYEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E L    + +E++M GLR + G+S++    + G  L   C          G +  +  + 
Sbjct: 296 EKLDEAARYNEYIMTGLRTQWGVSLEHLGQVFGNKLLKYCRDMAAPHLESGKL-NIHNNH 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T+ G+ + D ++++L 
Sbjct: 355 LYFTRNGVFVSDDILSDLM 373


>gi|282919359|ref|ZP_06327094.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C427]
 gi|282317169|gb|EFB47543.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C427]
          Length = 385

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP++++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNKDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|327403343|ref|YP_004344181.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
 gi|327318851|gb|AEA43343.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
          Length = 376

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 110/376 (29%), Positives = 205/376 (54%), Gaps = 10/376 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFC +KC YCDF  H       ++  + +  +E++   +     S  +I+FGGGTP
Sbjct: 5   YIHIPFCAQKCSYCDF--HFSTNHSYKQEMVDALCSELEMRAKDWKAESFETIYFGGGTP 62

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           S++  + +  ++  + K ++VS++VEI++E NP    +   +G++K GVNR+S+G+QS +
Sbjct: 63  SILTNEQLNQLIQQVKKTYSVSADVEISLECNPDDCSLEQLEGWKKLGVNRLSMGIQSFD 122

Query: 142 EQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           EQ L+++ R+H ASE++ A+  A+   F  +S DLIY LP  ++  W  +L + ++   +
Sbjct: 123 EQQLKWMNRSHTASESLNAVLNAKQVGFDELSLDLIYGLPNMSLESWAAQLDQIIALNPE 182

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT+E+ T      K+G +++ + +   + + L  +     G   YEISN +   
Sbjct: 183 HISAYCLTVEEKTALSSWVKEGKIIVSTIDQQSEQFELLVAKLKTAGFEQYEISNFARNA 242

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HN +YW+  +YIGIGP AH   +   +    +     +++L  ++K        E 
Sbjct: 243 HYSKHNTSYWKGTNYIGIGPSAHGYNQKERYWNQANN----KAYLLEIQKGKLP-ETIET 297

Query: 321 LSSEQQADEFLMMGLRLREGISVKD-WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
           LS   Q +E L++GLR + G+S +  ++++   +   +   + + Q  + +     +  T
Sbjct: 298 LSHFDQFNELLLIGLRTKWGVSKEKLFQLIQPNSKWTKIVIDYEEQKMLIQTD-EIIVLT 356

Query: 380 QRGMTMLDSVIANLAV 395
           Q G  + D++ A+L +
Sbjct: 357 QEGRLLADAIAADLFL 372


>gi|332522603|ref|ZP_08398855.1| putative coproporphyrinogen dehydrogenase [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332313867|gb|EGJ26852.1| putative coproporphyrinogen dehydrogenase [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 376

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 198/385 (51%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++Q+ + E +          + ++
Sbjct: 2   KKKPSSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDAYLQALIAEFRSY----EISQLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I  Q +  +L  + ++  V+S  E TIEANP  ++       + + VNR+S
Sbjct: 57  YIGGGTPTAINAQQLDYLLTELTRDLDVASLEEFTIEANPGDLDAEKIAVLQASAVNRVS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+  ++ L+ +GR+HN ++    I  L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNDKHLKQIGRSHNEAQIYETIDSLKAAGFSNISIDLIYALPGQTLEQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++        AHG   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIIQEMEAHGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G  S HNL YW    Y G G GA   +    +R  + I    + +LK V++ G+
Sbjct: 237 SNFGKPGYYSQHNLMYWNNDHYYGCGAGASGYLDGIRYRNRVPI----QHYLKAVQE-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
           A + +E L+ E+  +E L +GLR + G+S+  +E     +      +    L  QG +  
Sbjct: 292 ARLTEEVLTLEEMMEEELFLGLRKKSGVSIAQFEAKFPHSFKERYGQIVEELVAQGLLV- 350

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
               R+R T+RG+ + DSV     +
Sbjct: 351 DDPQRVRMTKRGLFLGDSVAEKFIL 375


>gi|332851893|ref|ZP_08433796.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013150]
 gi|332867952|ref|ZP_08437940.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013113]
 gi|332729678|gb|EGJ61014.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013150]
 gi|332733653|gb|EGJ64812.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6013113]
          Length = 368

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 128/377 (33%), Positives = 205/377 (54%), Gaps = 16/377 (4%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P+CV+KCPYCDFNSH              ++++ + + +   +L   RSI S+F GGGT
Sbjct: 1   MPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVELAQGRSIHSVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSLI  +  A + + +        + EIT+EANP ++E + F GY +AG+NR+S+GVQ+ 
Sbjct: 61  PSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGINRLSIGVQTF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   +L+ A+    
Sbjct: 121 NTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGA 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G   YE+S     
Sbjct: 181 THISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYLKANGFINYEVSAWRKE 236

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HNLNYW++GDY+ IG GAH +V            + P+ +L  V      + + E
Sbjct: 237 -QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAEHLQMKKIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLR 377
              +++   EF+M  LRL +G+  + +E+  G +L+   +   +L+ +  +      RL 
Sbjct: 296 ---ADELPFEFMMNALRLNDGVKAELYELRTGLSLNDLNDVLTSLRSRKLLVE-DSGRLA 351

Query: 378 CTQRGMTMLDSVIANLA 394
           CT++G   L+SV+    
Sbjct: 352 CTEQGHIFLNSVLEEFL 368


>gi|329733224|gb|EGG69561.1| putative coproporphyrinogen dehydrogenase [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 385

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|228475950|ref|ZP_04060658.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis SK119]
 gi|314936296|ref|ZP_07843643.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis subsp. hominis C80]
 gi|228269773|gb|EEK11253.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis SK119]
 gi|313654915|gb|EFS18660.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus hominis subsp. hominis C80]
          Length = 373

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 185/380 (48%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + +I + + EM+     +  R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-NKQPVDEYISALIKEMKT----SEIRNLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I    T S   E T EANP  + ++  +     GVNRIS+GVQ+
Sbjct: 60  TPTALNLKQLETLLKAIQS--TFSIKGEYTFEANPDELTLDKVKLLHSYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L+ LGR H   +   A+  AR      +S DL+Y LP QT+  +   L RA+   
Sbjct: 118 FKPELLKILGRTHKTQDIYNAVDYARKANIESISLDLMYHLPTQTLDDFSDSLNRAIQMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  ++Y    ++        YEISN + 
Sbjct: 178 IDHISSYGLILEPKTQFYNMYRKGKLKLPNEDLGAEMYQYLMNVLGETSFKQYEISNFAK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN  YW   +Y G G GA   V    +     +      ++  +  +   ++  
Sbjct: 238 SHHESRHNKTYWLNEEYYGFGAGASGYVNGERYSNLNPVN----HYINAINNHQRPILTS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
            F +  ++ +E + +GLR+ +G+    +    G ++D    E   NL+++  +       
Sbjct: 294 NFPTQSERMEEEMFLGLRMNKGVDKVKFLSKFGTSMDKVFGETINNLKKKNLLYERDN-H 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 ISLTNRGKIIGNEVFEAFLL 372


>gi|251782642|ref|YP_002996945.1| coproporphyrinogen III oxidase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391272|dbj|BAH81731.1| coproporphyrinogen oxidase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 376

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 201/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLEALIQEFESY----DIHDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I    +  +L  + +N  +    E TIEANP  +  +  +    + VNRIS
Sbjct: 57  YIGGGTPTAITADQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLEHSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++     + +       R+LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFDISFEERYGTIVRDLQDQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|282904165|ref|ZP_06312053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus C160]
 gi|282905992|ref|ZP_06313847.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282911221|ref|ZP_06319023.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|283958347|ref|ZP_06375798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295428161|ref|ZP_06820793.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|282324916|gb|EFB55226.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282331284|gb|EFB60798.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282595783|gb|EFC00747.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790496|gb|EFC29313.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295128519|gb|EFG58153.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus EMRSA16]
          Length = 385

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|283470862|emb|CAQ50073.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus ST398]
          Length = 374

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E + EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSIDQLERLLKAIRDTFTITG--EYSFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIISISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 EGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|219850400|ref|YP_002464833.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
 gi|219544659|gb|ACL26397.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
          Length = 393

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 126/398 (31%), Positives = 192/398 (48%), Gaps = 30/398 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS------- 72
            +Y+H PFC ++C YCDFN++          ++ +  TE+  +R+   P   S       
Sbjct: 3   HLYIHIPFCHRRCSYCDFNTYANMEHH-IAAYVDALCTELAMLRESLPPLPKSPAAAALR 61

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGV 130
            SIFFGGGTPS++ P  I  IL   A    +    EI++EANP +V   +  +  R  GV
Sbjct: 62  PSIFFGGGTPSMLTPAQIERILIAAAALVPL-ETAEISLEANPGTVLGRDYLRDIRSLGV 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQSL + +LR LGR H A+EA A+   AR   F  ++ D I+ LP Q +  W+ 
Sbjct: 121 NRLSMGVQSLHDPTLRILGRIHTAAEARASYLDARAVGFESINLDFIFGLPGQDLADWQA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L   +++ VDHL+LY L +E+ T  Y     G + +P +++   +Y L   +    G  
Sbjct: 181 TLTEVIAWDVDHLALYSLILEENTPLYAQVTAGRVQIPDDDLTAAMYELAMDLLDKAGYR 240

Query: 250 AYEISNH----------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            YEISN           +       HNL YW   DY+  G GAH  +    +    SI  
Sbjct: 241 HYEISNWVRPQPDDRPDAPPRLACHHNLAYWFNSDYLAAGAGAHGHLFPQRYANIRSI-- 298

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC- 358
             + ++  V+     + E   L+    A E +MMGLRL  G+S + +    G +L     
Sbjct: 299 --DGYIAAVQAGHRPIAETIPLTPADLAAETMMMGLRLDIGVSFEHFAARVGDDLIEHYG 356

Query: 359 --ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                L + G I  +   R+  T+RG  + + V A+  
Sbjct: 357 TTLHELMQHGLIA-MDDRRVWLTERGRMVGNHVFAHFL 393


>gi|330995934|ref|ZP_08319829.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Paraprevotella xylaniphila YIT 11841]
 gi|329574273|gb|EGG55848.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Paraprevotella xylaniphila YIT 11841]
          Length = 396

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 117/396 (29%), Positives = 197/396 (49%), Gaps = 27/396 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIF 75
           G+Y+H PFC  +C YCDF S     K     +I +   E++              I +I+
Sbjct: 3   GIYIHIPFCTSRCVYCDFYSTTCGEKDK--AYISALTNELRLRANYLQQDGQMPVIETIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++   +  I + + + + VS   E+TIEANP  +     +      VNR+S+
Sbjct: 61  IGGGTPSTLDTSLLEPIFEALFQTYNVSDRAEVTIEANPDDLTPRKIKSLHTLPVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ ++  LR L R H+  +AI A+H  ++  F  +S DLIY LP Q++ +WE ++  A
Sbjct: 121 GVQTFDDGKLRLLHRRHSGEQAIRAVHDCQDTGFDNISIDLIYGLPAQSLREWETDVDTA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  V H+S Y L  E+GT  +KM K   +    E +++++++L        G   YEIS
Sbjct: 181 LSLNVQHISAYALIYEEGTPLWKMRKRHVVEEADEELSLEMFSLLMCRLENAGFEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK---- 310
           N +  G  S HN +YW+   Y+G GP AHS       R           ++  V K    
Sbjct: 241 NFARPGFRSRHNSSYWKGIPYLGCGPSAHSF----DGRNRQWNHPDLNVYIDKVGKCFSS 296

Query: 311 ---NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---R 364
              N    +E+E L+  ++ ++ ++  LR  +G+++ + +   G+ L   C +      R
Sbjct: 297 EDFNRAPWIEQEELNLYERYNDCIITSLRTSDGLNLSELKRKFGQPLTDYCLQAAAVHLR 356

Query: 365 QGFIERVQ------FSRLRCTQRGMTMLDSVIANLA 394
            G +E ++         L+ T+RG+ + D ++++L 
Sbjct: 357 NGQLEIMEKKEQAPEGLLKLTRRGIFLSDGIMSDLL 392


>gi|256419534|ref|YP_003120187.1| oxygen-independent coproporphyrinogen III oxidase [Chitinophaga
           pinensis DSM 2588]
 gi|256034442|gb|ACU57986.1| oxygen-independent coproporphyrinogen III oxidase [Chitinophaga
           pinensis DSM 2588]
          Length = 374

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 184/379 (48%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YC+F  H       Q   ++  + E+   R       +SSI+FGGG
Sbjct: 3   GIYLHIPFCKQACYYCNF--HFSTSLSQQPALVKQLVREIDLQRNYLSGAPVSSIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++   +I L+L  +   + V+ + EIT+EANP  +        R AG+NR+S+G+QS
Sbjct: 61  TPSMLPQADIQLLLSKLRDTFPVNPDAEITLEANPDDLSPGKLDALRAAGINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  LR++ R H++ +A+ +I  A+   F  ++ DLIY  P  T   W   +Q+A+   
Sbjct: 121 FHEPDLRWMNRAHDSQQALQSIINAKAAGFDNLTIDLIYGGPTLTDEGWAANVQQAIDLG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HLS Y LT+E GT   +  +   +     + A   +      T+  G   YEISN + 
Sbjct: 181 VQHLSCYALTVEPGTALDQFIRKKKVAAVDSDKAARHFEQLMQWTAKAGYEHYEISNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+G+GP AHS           +       ++K + ++     E 
Sbjct: 241 PGWHSRHNSSYWQGQPYLGLGPSAHSFNGGSRQWNIANN----AQYIKSMEQDKVP-FEL 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSR 375
           E L++    +E++M  LR  +G  +       G   R+  ++  R    +G++  ++   
Sbjct: 296 EELTAVMMLNEYIMTTLRTSQGCILPVVAERFGTDKRDTLLQLSRTFIDKGWM-ILRNDT 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T  G    D + ++L 
Sbjct: 355 LVLTPEGRLFADGIASDLF 373


>gi|86605492|ref|YP_474255.1| coproporphyrinogen III oxidase [Synechococcus sp. JA-3-3Ab]
 gi|86554034|gb|ABC98992.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. JA-3-3Ab]
          Length = 397

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 188/384 (48%), Gaps = 17/384 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---QWMRQLTG-PRSISSIF 75
             Y+H PFC ++C YCDF + +   ++  E ++Q    E+      R L G P+ ++SIF
Sbjct: 21  AAYLHIPFCRQRCHYCDFATGLGTREL-IETYVQRLCQEIGGAHRYRHLAGDPQPLTSIF 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + ++ IL  + +      + EI++EANP ++      GYR  GVNRISL
Sbjct: 80  FGGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGTLTREQLAGYRDLGVNRISL 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ + + L   GR H   E   A+   +   F   + DLI+ LP QT+  W+  LQ  
Sbjct: 140 GVQAFQAELLAACGRLHGVEEIYEAVADLQAVGFENFNLDLIFGLPYQTLEHWQESLQAV 199

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L     H+S+Y LT+E GT F ++++ G+  LPSE   V +Y   + + +  G   YEIS
Sbjct: 200 LEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAMYLTARELLTQAGYIHYEIS 259

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G    HN  YW    Y G G G+            I   K   ++ + V+   H 
Sbjct: 260 NFARPGYACRHNRVYWENRPYFGFGMGSVGY----EGGRRIQQPKTLHAYFEQVKAQVHP 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERV 371
           +      S+E+   + +M+GLRL+EG+ +   +   G     +  + L     +G+    
Sbjct: 316 LP--PPASAEEIWMDTVMLGLRLQEGLELATLQERFGSRKVEQALQRLDPYFEKGW-ASC 372

Query: 372 QFSRLRC-TQRGMTMLDSVIANLA 394
           +  RLR     G    + VI  L 
Sbjct: 373 EAGRLRLVPPEGWLFSNEVIEELL 396


>gi|323436159|ref|ZP_01050978.2| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dokdonia donghaensis MED134]
 gi|321496474|gb|EAQ38129.2| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dokdonia donghaensis MED134]
          Length = 377

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 115/378 (30%), Positives = 192/378 (50%), Gaps = 9/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF  H       +E  I + ++E++  +       +S+++FGGG
Sbjct: 3   SIYIHIPFCKQACHYCDF--HFSTTMGKKEEMITAIISELEMRKAEFENDEVSNLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  I+D    ++ +  + EIT+EANP  +     +    + +NR+S+GVQS
Sbjct: 61  TPSVLNTEEIEQIIDACYTHYKIEKDPEITLEANPDDLTEQKIRELAASPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA EAI  + L R  FP  S DLIY +P  +  +WE  + + L+  +
Sbjct: 121 FYEEDLKLMNRAHNAQEAIDCLRLTRATFPNSSLDLIYGIPGMSNERWEQNIDKVLALDL 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T      K G +    + VA   + L      A G   YE SN +  
Sbjct: 181 PHISAYALTVEPKTALENFIKKGIVPPVEDEVAQQHHELLIRKMEAAGYENYEFSNFAKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW+   YIGIGP AHS       R A +I  +P+ ++K +        E E
Sbjct: 241 GYHSRNNTAYWQGKKYIGIGPSAHSY---DGKRRAWNINNNPK-YIKAITAGELP-QEVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRLR 377
            LS   Q +E++M  LR + G+S+ + +   G         + Q+  +  +  ++  R+ 
Sbjct: 296 ELSLTDQYNEYVMTRLRTQYGVSLLEIKTQYGERFYNYFLEHAQKHIEEHLLFIEEDRVY 355

Query: 378 CTQRGMTMLDSVIANLAV 395
            +++G  + D + ++L +
Sbjct: 356 VSKKGKFLSDGIASDLFL 373


>gi|282916853|ref|ZP_06324611.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus D139]
 gi|283770659|ref|ZP_06343551.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus H19]
 gi|282319340|gb|EFB49692.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus D139]
 gi|283460806|gb|EFC07896.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus H19]
          Length = 385

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDME 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|257425708|ref|ZP_05602132.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257428369|ref|ZP_05604767.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257431006|ref|ZP_05607386.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433694|ref|ZP_05610052.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436608|ref|ZP_05612652.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M876]
 gi|282914390|ref|ZP_06322176.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M899]
 gi|282924684|ref|ZP_06332352.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C101]
 gi|293503464|ref|ZP_06667311.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293510481|ref|ZP_06669187.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M809]
 gi|293531021|ref|ZP_06671703.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|257271402|gb|EEV03548.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275210|gb|EEV06697.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257278436|gb|EEV09072.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281787|gb|EEV11924.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283959|gb|EEV14082.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M876]
 gi|282313519|gb|EFB43914.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus C101]
 gi|282321571|gb|EFB51896.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M899]
 gi|290920289|gb|EFD97355.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095130|gb|EFE25395.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291466845|gb|EFF09365.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus M809]
          Length = 385

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDVLTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|323127457|gb|ADX24754.1| coproporphyrinogen III oxidase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 376

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 202/385 (52%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                  YVH PFC + C YCDF+    + +   + ++++ + E +          + ++
Sbjct: 2   SKKPTSAYVHIPFCTQICYYCDFSKVFIQNQ-PVDAYLEALIQEFESY----DIHDLKTL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ I    +  +L  + +N  +    E TIEANP  +  +  +  + + VNRIS
Sbjct: 57  YIGGGTPTAITAAQLEYLLSHLERNLNLGYLEEFTIEANPGDLTPDKIEVLKHSAVNRIS 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+   + L+ +GR+HN  +  + I +L    F  +S DLIYALP QT+ Q +  + +
Sbjct: 117 LGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAK 176

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  + HLSLY L +E  T+F    + G L LP+E++  +++    S   A+G   YEI
Sbjct: 177 ALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEI 236

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW   +Y G G GA   +    ++  + I    + +LK V   G+
Sbjct: 237 SNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPI----QHYLKAVEA-GN 291

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
           A + +E L  E+  +E L +GLR + G+S++ ++     + +       R+LQ QG + +
Sbjct: 292 ARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFDISFEERYGTIVRDLQDQGLLVK 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
              + +R T++G+ + DSV     +
Sbjct: 352 -DDAFVRMTKKGLFLGDSVAERFIL 375


>gi|222151482|ref|YP_002560638.1| oxygen-independent coproporphyrinogen III oxidase homolog
           [Macrococcus caseolyticus JCSC5402]
 gi|222120607|dbj|BAH17942.1| oxygen-independent coproporphyrinogen III oxidase homolog
           [Macrococcus caseolyticus JCSC5402]
          Length = 371

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 17/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDFN  + + +   + ++   + E+         R + ++F GGG
Sbjct: 3   SLYIHIPFCNRICTYCDFNKFLIKNQ-PVDEYLDCLIKEL----SFIDERDLLTVFIGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I +++T+    E T+EANP  +  N     ++ GVNR+SLGVQ+
Sbjct: 58  TPTALNEGQLERLLSYIEQSFTIHE--EFTMEANPDELTRNKIALMKQYGVNRLSLGVQT 115

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ LGR H   +   A+  A  +    +S DL+Y LP QT+ Q   +L  A S  
Sbjct: 116 FDNDLLKSLGRTHQEQDIFNAVSAANELGIESISLDLMYHLPTQTLEQCRRDLALATSLD 175

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M+K G L LP E +A ++Y LT +  SA G H YEISN++ 
Sbjct: 176 IHHISSYSLILEPKTQFYNMYKKGMLQLPDEQLAAEMYTLTMNTLSAQGFHQYEISNYAK 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN  YW+  +Y G G G+H  +    +     +  + ++  K     G AV E+
Sbjct: 236 GHHESTHNKVYWQNKEYYGAGAGSHGYIDGVRYYNIAPVPHYIKAMHK-----GDAVKER 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
             ++ +   +EF+ +GLRL EGIS  ++      + D   +     L ++G++  +   R
Sbjct: 291 IPVTVDAAMEEFMFLGLRLNEGISKNEFLARYKTSYDDVFKDVTTELVKEGYLIEM-NDR 349

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T  G    + V     +
Sbjct: 350 ISLTALGRMRGNDVFEKFLL 369


>gi|270295870|ref|ZP_06202070.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D20]
 gi|270273274|gb|EFA19136.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           D20]
          Length = 376

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 127/380 (33%), Positives = 191/380 (50%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     ++ +I++  TE++  +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKTRCIYCDFYSTTRSEL--KQQYIRALCTELKTRKGYLKEEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  ++   I   I + +      EIT+EANP  +        R    NRIS+G+Q+
Sbjct: 61  TPSQLAHEDFEQIFRTIKEVYGTEHAEEITLEANPDDLTEEYVSMLRTLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  +L+ L R HNA++AIAA+H  R   F  +S DLIY LP +T  +WE +LQ+A+   
Sbjct: 121 FDAPTLKLLNRRHNAAQAIAAVHRLRQAGFRNISIDLIYGLPDETDQRWERDLQQAVGLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT EKGT  Y+M +   +    E  +V  ++       A G   YEISN   
Sbjct: 181 VEHISAYHLTYEKGTRIYEMLQSHRISEVDEESSVRFFSALMDTLGAAGYEHYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G GP AHS           S     E ++K + +   +  E 
Sbjct: 241 PGMYSRHNTAYWKGIPYLGCGPSAHSFNAETREWNTAS----LEGYIKSIEEGQRS-SET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERVQFS 374
           E L    + +E++M  LR   G+S+   E   G  L   C +     LQ       +Q  
Sbjct: 296 EILDKVTRYNEYIMTSLRTMWGVSLTYTEEAFGTELRQYCTKMAAPYLQSHKL--EMQAD 353

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL  T+ G+ + D +I++L 
Sbjct: 354 RLHLTREGIFVSDGIISDLM 373


>gi|223985720|ref|ZP_03635767.1| hypothetical protein HOLDEFILI_03073 [Holdemania filiformis DSM
           12042]
 gi|223962331|gb|EEF66796.1| hypothetical protein HOLDEFILI_03073 [Holdemania filiformis DSM
           12042]
          Length = 370

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 122/379 (32%), Positives = 192/379 (50%), Gaps = 24/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDF + VR +    + +++    E++      G   + +++ GGG
Sbjct: 11  ALYVHIPFCQGICAYCDF-TRVRYHTGLADQYLKQLARELEERVPCQG---METVYIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P  +  +LD +     +    E+TIEANP ++     +     G+NRISLG+QS
Sbjct: 67  TPTALSPDQLWRLLDLLQPY--LQGAAEVTIEANPEAINAELIEILLNGGINRISLGLQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H  ++A  A+ L +      +S DLIY+LP QT TQWE  LQ  LS  
Sbjct: 125 CDDEILKQIGRRHTFAQARQAVRLLQQAGLTNISCDLIYSLPHQTRTQWEKTLQDVLSLN 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H SLY LTIE+ + F +           E+    +Y     + +  G   YEISN + 
Sbjct: 185 IPHCSLYALTIEEHSEFGR----TGQRPLDEDTEASMYFEAVRVLTEAGYQHYEISNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HNL+YW Y D+ G+G GA  ++    +    + +++ +         GH + E 
Sbjct: 241 PGYASRHNLHYWNYDDFYGVGLGASGKLSSFRYDNTRNFQEYFK---------GHWIGET 291

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
             LS   Q  E +MM LR   G+S+ D+E   G  L       +Q   RQG++ R+   R
Sbjct: 292 IELSRRDQMFERVMMNLRTARGVSLADFEQKFGLPLSEVYPDAVQKGIRQGWL-RMTEDR 350

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T+ GM +L++V+    
Sbjct: 351 LAPTEAGMALLNTVLEEFL 369


>gi|260903871|ref|ZP_05912193.1| coproporphyrinogen III oxidase [Brevibacterium linens BL2]
          Length = 410

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/390 (30%), Positives = 189/390 (48%), Gaps = 20/390 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLT--- 66
           G  +  L +YVH P+C  +C YCDFN++          ++++  +   E+    ++    
Sbjct: 23  GAAARGLSLYVHVPYCRVRCGYCDFNTYTAEDLGPGASRDDYRSNLSRELDLSVRVLAEA 82

Query: 67  --GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             G R +++IFFGGGTP+++  + +A ++D I   + ++ +VE+T EANP +++      
Sbjct: 83  GAGDREVTTIFFGGGTPTMLAAEVLAGVMDDIRDRFRLAPDVEVTTEANPDTLDPAYIAT 142

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
              AG  RISLG+QS     L  L R H+ ++        +     +S DLIY  P +++
Sbjct: 143 LAAAGFTRISLGMQSAVPHVLATLDRTHDPAKIPDVARWIKEAGLELSLDLIYGTPGESI 202

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L+ ALS  VDH+S Y L +E GT    M + G+L +P E+   D Y +  +  +
Sbjct: 203 DDWRRSLEVALSNDVDHISAYSLIVEPGTKMGAMVRRGELPMPDEDDLADKYEIADAAMA 262

Query: 245 AHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A GLH YE+SN S        HN+ YWR  D+ G GPGAHS V      V     KHP +
Sbjct: 263 AAGLHWYEVSNWSTSAETRCDHNMAYWRNADWWGFGPGAHSHVGG----VRFWNAKHPRA 318

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W   +       + +E L    Q  E +M+  R+   + +      + R +     R   
Sbjct: 319 WSDRLLAGESPAIGREVLDESTQEIERIMLAARIDSELPLDSLGAGSERAI-----RGFV 373

Query: 364 RQGFI--ERVQFSRLRCTQRGMTMLDSVIA 391
           +QG +  + V   R   T +G  M D ++ 
Sbjct: 374 KQGLLDGDAVDEGRFEPTLQGRLMADYMVR 403


>gi|49483831|ref|YP_041055.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|297590873|ref|ZP_06949511.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49241960|emb|CAG40655.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MRSA252]
 gi|297575759|gb|EFH94475.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312437948|gb|ADQ77019.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195486|gb|EFU25873.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 374

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|226324471|ref|ZP_03799989.1| hypothetical protein COPCOM_02252 [Coprococcus comes ATCC 27758]
 gi|225206919|gb|EEG89273.1| hypothetical protein COPCOM_02252 [Coprococcus comes ATCC 27758]
          Length = 393

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 130/395 (32%), Positives = 204/395 (51%), Gaps = 23/395 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H PFCVKKC YCDF S     K  +E +++  + E++          + SIFFG
Sbjct: 3   PLELYIHIPFCVKKCAYCDFLSGPAGEKE-KEEYVKMLVDEIRNCPDTVQNYRVISIFFG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + I  ++D + + +T+  + EIT+E NP +V     + YR+AGVNR+S+G+
Sbjct: 62  GGTPSLLTGEQIGRLMDTVREIFTLDEDAEITMEMNPGTVTEEKLRKYRQAGVNRLSIGL 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS+ ++ LR LGR H   E + A HLAR N F  ++ DLI A+P QT+  W   L++ ++
Sbjct: 122 QSVNDEELRLLGRIHTYEEFLEAYHLARANGFANINVDLISAIPGQTVESWRRTLEQVMA 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD----LVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +H+S Y L +E+GT FYK + + +      LP E+    +Y  T+++   +G H YE
Sbjct: 182 LFPEHISAYSLILEEGTTFYKKYVEDEAKEGPKLPDEDAERQMYWDTETLMEKNGYHRYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---------KVGSHRVAISIEKHPES 303
           ISN++  G    HNL YW    Y+G G GA S V         K+       +       
Sbjct: 242 ISNYAKEGYACRHNLGYWERIPYLGFGIGAASLVPGDLIGKCRKLKGKMSRYTNPDQLRE 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN-- 361
           +    R    A +  E    E+       +GLR   GIS K++    G++L+        
Sbjct: 302 YAHSYRNKFQAELLTETEEMEEFMF----LGLRKMNGISKKEFSEYFGKSLEDIYGEPIC 357

Query: 362 -LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            L+    +E+    R+  T+RG+ + +SV     +
Sbjct: 358 KLESLKLLEQ-DDDRVWLTKRGIDVSNSVFVEFLL 391


>gi|220906936|ref|YP_002482247.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 7425]
 gi|219863547|gb|ACL43886.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7425]
          Length = 405

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 119/390 (30%), Positives = 188/390 (48%), Gaps = 21/390 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSIS 72
               Y+H PFC ++C YCDF   V   +   E     ++I+    E+Q       P+ ++
Sbjct: 10  PTAAYIHIPFCRRRCFYCDFPISVVGDRSRGETPAINHYIEVLCQEIQLAP--VPPQPLA 67

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTPSL++   I  IL  +  +  ++++ EI++E +P +  +    GYR  GVNR
Sbjct: 68  TVFFGGGTPSLLDAAQIGHILQTVQDHLGIAASAEISLEVDPGTFTLAQMSGYRDRGVNR 127

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ+ + + L  +GR H  +E  AA+ + R         DLI  LP QT+ QWE  L
Sbjct: 128 LSLGVQAFQPELLSQMGRTHTVAEIHAAVEMIRQAGLTNFGLDLISGLPGQTLEQWETSL 187

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q A+     H+S Y L +E GT+F K +  G   LP + ++  +Y L      + G   Y
Sbjct: 188 QCAIDLQPTHVSTYDLVLEPGTVFGKRYSPGHTPLPEDEISAQMYELATERLRSAGYEHY 247

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G +  HN  YW+   Y G G GA S V         +  ++ + W+  +   
Sbjct: 248 EISNYAQPGYQCRHNRIYWQNRPYYGFGMGATSYVNHQRVSRPRTRREYYQ-WVDALAAA 306

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ-------- 363
              +VE   ++   +  E LMMGLRL EG+S++      G     +  + L         
Sbjct: 307 EGQMVE-PPVTPLDEWLETLMMGLRLAEGVSLEALAAKFGEQKVSQLLKALAGCLDNARA 365

Query: 364 -RQGFIERVQF-SRLRCT-QRGMTMLDSVI 390
            +QG++        L  T   G    + V+
Sbjct: 366 GQQGWVGLNPSTQHLYLTDPEGFLFCNQVL 395


>gi|90415269|ref|ZP_01223203.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2207]
 gi|90332592|gb|EAS47762.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2207]
          Length = 363

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 128/364 (35%), Positives = 200/364 (54%), Gaps = 13/364 (3%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH    ++ ++ +I++ + ++Q  ++    R + SIFFGGGTPSL     I
Sbjct: 2   RKCPYCDFNSHTAGSEIPEQAYIKALIADLQQDKKWAQGRKLCSIFFGGGTPSLFSAAGI 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             IL    +      ++EIT+EANP + E   F G+R AGVNR+S+G+QS  +Q L  LG
Sbjct: 62  GQILKAAERIIGFEPDIEITLEANPGTAEQEKFSGFRSAGVNRLSIGIQSFNDQHLLRLG 121

Query: 150 RNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H+ ++A++AI  AR   F   + DL++ L  QT+ Q   +L+ A      H+S YQLT
Sbjct: 122 RIHDGAQALSAIETARRAGFSNFNLDLMHGLSGQTVDQARRDLELASDSGALHISWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  T FY         LP E+  VD+      +    G   YE+S  +  G  S HN+N
Sbjct: 182 IEPNTEFYSRPP----QLPEEDALVDIQQAGMELLDNGGYKQYEVSAFAQPGRRSQHNMN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRV--AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           YW++GDY+GIG GAH +V + +       +  + P+++L     +   + +++ ++ ++ 
Sbjct: 238 YWQFGDYLGIGAGAHGKVTLATENSILRTNKTRQPDNYLAR---DPLTLAQQKPIARDEL 294

Query: 327 ADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGMT 384
           A EF+M GLRLR+G++   +    G       ++   LQ QG +E V   R + T  G  
Sbjct: 295 AVEFMMNGLRLRDGLNAGFFTSRTGLAASSIAKQVAKLQSQGLME-VDSRRYQTTALGYQ 353

Query: 385 MLDS 388
            L+S
Sbjct: 354 FLNS 357


>gi|302385297|ref|YP_003821119.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           saccharolyticum WM1]
 gi|302195925|gb|ADL03496.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           saccharolyticum WM1]
          Length = 407

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 117/407 (28%), Positives = 200/407 (49%), Gaps = 28/407 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +L +YVH PFCV+KC YCDF S     ++ Q  + +  + E+Q          + S+
Sbjct: 3   NKKNLEIYVHVPFCVRKCAYCDFLSFPGNRQM-QREYTEKLIEEIQCQSAKVREYQVISV 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS++  ++++ +   +   + +  + EIT+E NP +V   +   YR+AGVNRIS
Sbjct: 62  FIGGGTPSILNIEDMSAVFHALTNGFEILPDAEITMEVNPGTVTAESLSCYREAGVNRIS 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS +++ L +LGR H   E + +        F  ++ DLI A+P QT+  W+  L++
Sbjct: 122 MGLQSADDKELGYLGRIHTYDEFLKSYQRVRMAGFDNVNVDLISAIPGQTVESWKNTLKK 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGD---------------------LVLPSENVA 232
                 +H+S Y L +E+GT +Y  + +                         LP E+  
Sbjct: 182 VTMLKPEHISAYSLIVEEGTPYYDRYGEPVEVENHTVTQEKVHGLKSLPDLPDLPDEDAE 241

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
            D+Y LT+      G   YEISN+S  G E  HN+ YW   +Y+G+G GA S +      
Sbjct: 242 RDMYYLTRDFLKEQGYERYEISNYSKKGYECRHNIGYWTGTEYLGLGLGASSYLSGCRFH 301

Query: 293 VAISIEKHPESWLKMVRKNGHAV-VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                +++  + L         +  E E L+ E++ +E++ +GLRL +G+S + +    G
Sbjct: 302 NTSVYKEYCSARLDREEVFQEVLRQEFERLTLEEKMEEYMFLGLRLTQGVSAQGFVSSFG 361

Query: 352 RNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            N+          +++ G +E+      R T RG  + + V++   V
Sbjct: 362 HNIRSIYGPVLDAMEKDGLMEQND-GYYRLTSRGTDISNYVMSQFFV 407


>gi|153953533|ref|YP_001394298.1| coproporphyrinogen III oxidase [Clostridium kluyveri DSM 555]
 gi|219854155|ref|YP_002471277.1| hypothetical protein CKR_0812 [Clostridium kluyveri NBRC 12016]
 gi|146346414|gb|EDK32950.1| Oxygen independent coproporphyrinogen III oxidase-related protein
           [Clostridium kluyveri DSM 555]
 gi|219567879|dbj|BAH05863.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 383

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 184/384 (47%), Gaps = 17/384 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  L +Y+H PFC KKC YCDF S+  +  V  + + +    +++ M    G R I +IF
Sbjct: 10  NKPLSLYIHIPFCKKKCFYCDFPSYSGKENVMMD-YSKVLAKDIETM----GNREIDTIF 64

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +       I D   +    + ++E T+E NP +         R  GVNR+S+
Sbjct: 65  IGGGTPTYLSLDAWYNI-DKSIQKLNTTEDLEFTVEGNPGTFTKEKLIFLRNMGVNRLSI 123

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+ +   L+ LGR H   + +    +AR+  F  ++ DLI+ LP QT+  W   L+  
Sbjct: 124 GLQAWQNDMLKNLGRVHTLEDFLEGYKMARSLGFSNINVDLIFGLPGQTLEIWRDCLENV 183

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  + +H+S Y L +E+GT FY ++ +  L LP E     +Y+ T           YEIS
Sbjct: 184 VEISPEHISCYSLIVEEGTPFYNLYGENKLNLPPEKEERAMYDFTLEFLLKKCYKQYEIS 243

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G    HNL YW    Y+G G GAHS      +R      ++ E ++    +    
Sbjct: 244 NFCKKGNMCRHNLVYWDLKQYVGCGAGAHSYAGGYRYRNT----ENIEQYILEGTRGNFL 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE----CERNLQRQGFIER 370
            +++   S     +EF+ MGLR   GIS+ D+     +N+         + +  +  I R
Sbjct: 300 KLDRHKNSIYNDMEEFMFMGLRKVNGISISDFNNRFSKNIYSVYGNIITKYINNKMLILR 359

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               RL  ++RG+ + +S++    
Sbjct: 360 --DGRLYLSRRGIEVSNSIMCEFI 381


>gi|332971477|gb|EGK10429.1| oxygen-independent coproporphyrinogen III oxidase [Psychrobacter
           sp. 1501(2011)]
          Length = 407

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 123/406 (30%), Positives = 207/406 (50%), Gaps = 38/406 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN--------------FIQSFLTEMQWMR 63
            L +Y+H P+CVKKCPYCDFNSH       Q                ++ + + ++    
Sbjct: 11  PLALYIHIPWCVKKCPYCDFNSHTLPNNDSQSLTQTGTTIADDHFTVYVDALIKDIDSQL 70

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R I+SIF GGGTPSL+  +    +   +     ++ ++E+T+EANP ++E   F+
Sbjct: 71  SLIQGREITSIFIGGGTPSLLPIEQYQRLFSHLKSVLPLAKDLEVTMEANPGTLEHAPFE 130

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
            Y K G+NR+S+GVQS  +  L+ LGR HNA++A  A   A+   F R++ DL++ LP Q
Sbjct: 131 EYLKVGINRLSMGVQSFSDSKLKALGRIHNANQAQLATQAAKKAGFKRVNIDLMHGLPNQ 190

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            + +   ++++A      H+S YQLTIE  T+FY+       VLP +N   D+     ++
Sbjct: 191 NLAEALTDIEQAHHAGATHISWYQLTIEPNTVFYR----NTPVLPDDNDLADIEEQGSAL 246

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHNLNYWRYGDYIGIGPGAHSRV---------KVGS 290
            +  G   YE+S    +GA+     HN+NYW++GDY+ IG GAH ++            S
Sbjct: 247 LTQLGYQNYEVSAW--VGAQDIPCRHNVNYWQFGDYLAIGAGAHGKITLADDSSYPGFNS 304

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                S  + P+ ++    ++   +V    +++E  + EF+M  LRL  G+ +  + +  
Sbjct: 305 GIYRFSKTRLPKDYMSY--RDFPKMVGFSAIATEDLSGEFMMNALRLSSGVPLSLYSVRT 362

Query: 351 GRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G   +  +   + LQ+QG +   +   ++ T  G   L+ V+    
Sbjct: 363 GLATEQIMPIIKRLQQQGLLVDNE-EFIQPTALGQRYLNQVVQAFL 407


>gi|88811940|ref|ZP_01127193.1| coproporphyrinogen III oxidase [Nitrococcus mobilis Nb-231]
 gi|88790824|gb|EAR21938.1| coproporphyrinogen III oxidase [Nitrococcus mobilis Nb-231]
          Length = 369

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 126/366 (34%), Positives = 194/366 (53%), Gaps = 10/366 (2%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  R ++    ++ + L ++    +    R ISS+FFGGGTPSL  P  +
Sbjct: 2   RKCPYCDFNSHALRGELPATAYVDALLADVLREIKHIHEREISSVFFGGGTPSLFPPAAL 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           A +L+G+ +   ++++ EIT+EANP SV+   F+ +R AGVNR+S+GVQS +  SL  LG
Sbjct: 62  ARLLEGLQRYLRIAADCEITLEANPGSVDQARFEDFRSAGVNRLSIGVQSFQADSLHRLG 121

Query: 150 RNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H    A+AA+  A    F   + DL+Y LP Q       ++ +A++ A  H+S YQLT
Sbjct: 122 RIHGPQAAVAAVETAHAAGFDNFNIDLMYGLPNQGRPAAVADITQAIALAPPHISHYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +E  T F          LP ++    +    Q+  +  G   YE+S ++       HNLN
Sbjct: 182 LEPNTAFAARPP----ALPEDDAIYAMQIDCQTRLAGAGYQHYEVSAYALRDRRCRHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIEK--HPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           YW +GDY+GIG GAH +V           EK   P ++++     G AV +   LS++  
Sbjct: 238 YWSFGDYLGIGAGAHGKVTDLDKGKITRYEKLARPMAYIREATA-GEAVAKSHQLSAQDA 296

Query: 327 ADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMT 384
             EF+M  LRL EG+  K      G           + + +G+++     R+R T  GM 
Sbjct: 297 VLEFMMNALRLPEGVPRKLCTARTGLPWVCFEAAVDDARNRGWLDITADDRVRPTALGMR 356

Query: 385 MLDSVI 390
            L++++
Sbjct: 357 FLNNLL 362


>gi|119475466|ref|ZP_01615819.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
 gi|119451669|gb|EAW32902.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
          Length = 383

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 133/381 (34%), Positives = 192/381 (50%), Gaps = 14/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + +  +I   + ++         RS+ SIFFG
Sbjct: 12  PLSLYIHIPWCVRKCPYCDFNSHTTSV-IPESLYIDVLIEDLTQELANVQGRSLHSIFFG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     IA IL  + +  +   ++EIT+EANP S E + F GY  AGVNR+S+GV
Sbjct: 71  GGTPSLFSAAGIARILTEVERRISFCRDIEITLEANPGSAEQHKFSGYSAAGVNRLSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+ +EAIAA   AR       + DL++ LP QT  +   ++Q+A+ 
Sbjct: 131 QSFNPVHLSSLGRIHSNTEAIAAADAARRAGISNFNIDLMHGLPDQTQPEGLADIQQAID 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLTIE  T+FY         LPS++   D+ +    +        YEIS +
Sbjct: 191 LEPTHISWYQLTIEPNTVFYNSPP----TLPSDDQLADIQDAGDEMLGNAAFSQYEISAY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHA 314
           S     S HN NYW +GDYIGIG GAH ++        V     + P+ +L     +   
Sbjct: 247 SRDNQFSKHNTNYWLFGDYIGIGAGAHGKITDICSQQIVRRWKTRSPKDYLS---SDTGL 303

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ 372
           +     L + +   EFLM GLRL +G     +    G   +        L ++  + + Q
Sbjct: 304 IAGDRQLIAAELPLEFLMNGLRLNDGFETDLFTARTGLAWESMQPKLDQLIQRKLL-KHQ 362

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              LR T  G   L++++   
Sbjct: 363 SGNLRATAAGKRFLNTILEEF 383


>gi|315497097|ref|YP_004085901.1| oxygen-independent coproporphyrinogen iii oxidase [Asticcacaulis
           excentricus CB 48]
 gi|315415109|gb|ADU11750.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           excentricus CB 48]
          Length = 380

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 153/375 (40%), Positives = 231/375 (61%), Gaps = 9/375 (2%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPR 69
           M    S  + +Y+HWP+C + CPYCDFN    R +   +N + ++   +++      GPR
Sbjct: 1   MAVLTSAPVALYIHWPYCSRICPYCDFNVTRDRGQADTQNALFEAIRADLRMQASWLGPR 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+FFGGGTPSL++P  +A +++     + V++++EIT+EANP+  E+  ++ ++ AG
Sbjct: 61  RLVSVFFGGGTPSLMKPDWVAAVINEAKTLFPVTNDIEITLEANPTDAEIARYRAFQAAG 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+S+G+QSL + +LRFLGRNH+A EA+  +  A ++F R+S DLIYALP Q++  WE 
Sbjct: 121 INRLSIGIQSLNDAALRFLGRNHSAREALMGLETALSVFDRVSLDLIYALPDQSLENWED 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           EL+RA    V+H+S YQLTIE  T F +  + G L +P        Y+ TQS+ +  G  
Sbjct: 181 ELRRAAHLGVEHISPYQLTIESETAFGRAARRGQLRIPDPERGEAFYDQTQSVLTELGYE 240

Query: 250 AYEISNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           AYE+SNH+    A S HN+N W   DY+GIGPGAH R+     R A   E   ++++  V
Sbjct: 241 AYEVSNHARGKEARSKHNINVWEGVDYVGIGPGAHGRLTFDKARHATVAEPDLKAYIARV 300

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
           R+ GH+V  +E LS E+ ++E LM+GLRL EG+     E +AG  L+      L   GF+
Sbjct: 301 RETGHSVT-REPLSPEEASEEALMLGLRLIEGV---RLERIAGLPLNKS--DELIAGGFL 354

Query: 369 ERVQFSRLRCTQRGM 383
           E  +  RLR T +G 
Sbjct: 355 EATR-ERLRATPKGR 368


>gi|295136119|ref|YP_003586795.1| oxygen-independent coproporphyrinogen III oxidase [Zunongwangia
           profunda SM-A87]
 gi|294984134|gb|ADF54599.1| oxygen-independent coproporphyrinogen III oxidase [Zunongwangia
           profunda SM-A87]
          Length = 375

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 111/378 (29%), Positives = 185/378 (48%), Gaps = 11/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   + +   E+   +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKKKSELVSALQNELVLRKNELPNEPIKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + +  I   I   +T++ N EIT+EANP  +          + +NR+S+GVQS
Sbjct: 61  TPSLLNLEELTAIFKTIYTEFTIAENPEITLEANPDDLSEEKINELANSKINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA EA+ +I LAR+ F  +S DLIY +P  +  +W+  +Q  L   +
Sbjct: 121 FFEEDLKLMNRAHNAEEALNSIKLARSKFDNISVDLIYGIPGMSNERWQKNIQILLDLDI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  + G +    +  A   +   +++    G   YE SN+   
Sbjct: 181 PHISSYSLTVEPNTALQKFIEKGKIKPVDDAAAAQHFETLRTVLKNAGFEHYEFSNYGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW    Y+GIGP AHS           +       ++K + ++   + E E
Sbjct: 241 GYFSQNNTAYWLGKPYLGIGPSAHSYDGNSRKWNIANNT----LYIKAIERSELPL-EVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSRL 376
            LS   + +E++M  LR   G+ + + E   G+      +     L  + F+ R++ + +
Sbjct: 296 ELSITDRYNEYIMTRLRTYFGVDLVEVESKFGKEYLEYLKEQSVVLFEKEFL-RIENNVM 354

Query: 377 RCTQRGMTMLDSVIANLA 394
             T++G  + D + A+L 
Sbjct: 355 HITEKGTFLSDGIAADLF 372


>gi|219670312|ref|YP_002460747.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfitobacterium hafniense DCB-2]
 gi|219540572|gb|ACL22311.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfitobacterium hafniense DCB-2]
          Length = 375

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFCV+KC YC F S   + +   E+++ S   E+  +RQ      I ++F GGG
Sbjct: 3   SLYIHVPFCVQKCNYCAFYSEPWQ-RAKAEDYLASLNREV-VLRQHEISEEIETLFIGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I          E T EANP ++     Q     G+NRISLGVQS
Sbjct: 61  TPTALPEAELDALLSIIHGKLRFKDGAEKTTEANPGTLTAEKLQILHTQGINRISLGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ +GR H A E    + L R   F  ++ DL++ LP QT   W   L+ AL   
Sbjct: 121 FNDDLLKRIGRIHQAEEVADGVRLIREAGFKNLNLDLMFGLPGQTQANWRDTLEEALRIR 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS+Y L +E+GT    ++ +    LP ++   ++Y++ + I    G   YE+SN++ 
Sbjct: 181 PEHLSVYGLMVEEGTPMA-LNSEAITNLPDDDSQAEMYHVAREILGQAGYRHYEVSNYAL 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV--V 316
            G E  HNL YWR  +Y+GIGP A S +    ++      +   ++  M+ +    V   
Sbjct: 240 PGYECRHNLGYWRRQEYLGIGPSAVSCLNNHRYQNV----EDINAYETMLSQGKLPVDPQ 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFS 374
           E EFLS  +Q  E LM+GLRL++G+++  ++   G +L       L+R  +  + +++  
Sbjct: 296 EDEFLSKHEQMAELLMLGLRLKDGVNLLQFKKEVGADLFELYPAVLERYLKASVLKIEEG 355

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L        + + V+    
Sbjct: 356 SLLLRPEYWFVANGVLQEFV 375


>gi|293115614|ref|ZP_05792343.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Butyrivibrio crossotus DSM 2876]
 gi|292809116|gb|EFF68321.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Butyrivibrio crossotus DSM 2876]
          Length = 375

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 122/383 (31%), Positives = 204/383 (53%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+YVH PFCV KC YCDF S    Y   +  +  + + E+           + ++FF
Sbjct: 2   EEIGIYVHIPFCVSKCLYCDFLSGKSDYDERK-LYTAAIVKEIDNFNIPWNEYKVKTLFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+E +    I+  + K ++   N+E T+E NP +V  +    YR++GVNRIS G
Sbjct: 61  GGGTPSLLETELFDDIVTSLIKKFSFKKNIEFTVECNPGTVSKDKVDFYRQSGVNRISFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  ++ L  LGR H   +   +  L  N     ++ D++ +LP QT++ ++  LQ+ L
Sbjct: 121 LQSANDKELERLGRIHKFRDFERSFDLVFNSGIENINADIMSSLPCQTVSDYKRTLQKVL 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            + + H+S Y L IE+GT FY M++ G L LP E+   D+Y +T+++ +  G + YEISN
Sbjct: 181 DFPIRHISSYSLIIEEGTPFYIMNEKGTLKLPDEDEERDMYYMTETLLNEKGFNRYEISN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN  YW+ G+YIG G GA S +    +     ++K+ E        N    
Sbjct: 241 YAMPGYECEHNKIYWQRGNYIGFGAGAASLMDDVRYSNVRDVKKYIE--------NPCGY 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQ 372
              E LS   +  E++ +G+R+  G+S+  +  L G ++       +    ++G +  + 
Sbjct: 293 DGIEKLSLNDRMAEYMFLGMRMMSGVSISMFRQLFGTDMMNVYREPIDKHIKEGLL-YMG 351

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
             RLR T++G+ + + V  +  V
Sbjct: 352 NDRLRLTKKGIDLSNYVFCDFLV 374


>gi|298694865|gb|ADI98087.1| oxygen-independent coproporphyrinogen oxidase III [Staphylococcus
           aureus subsp. aureus ED133]
          Length = 374

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIVE-KNDA 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|87307109|ref|ZP_01089255.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
 gi|87290482|gb|EAQ82370.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
          Length = 384

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 123/384 (32%), Positives = 192/384 (50%), Gaps = 12/384 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
                  VYVH PFC+++C YC+F + V       ++++Q+   EM   RQL  P  + +
Sbjct: 10  DSKTPRSVYVHVPFCLRRCGYCNF-TLVAGRDDLIDSYLQAIEREM---RQLEQPHEVDT 65

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF+GGGTP+ +    +  +L   A+ +  +++ E ++EANP+ +          AGVNRI
Sbjct: 66  IFYGGGTPTHLPTPQLEKLLQLTAERFPPAADYEWSVEANPADLSDEKLDLLAAAGVNRI 125

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS  +  L+ L R+H  ++A +A    R  F +++ DLI+A P +++ QW  ++++
Sbjct: 126 SLGVQSFRDAKLQLLERDHLGADAQSAAQRVRPKFAQLAIDLIFAAPGESVPQWRDDVRQ 185

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A+    DH+S Y LT EKGT F+      DL    E    D Y     + +  GL  YE+
Sbjct: 186 AIELGADHVSTYGLTFEKGTTFWNRLLHDDLQEVDEETQRDQYLSGIEMLTTAGLQHYEV 245

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +       HN NYW  G Y   GPGA   V         S  +    +++ +     
Sbjct: 246 SNFARPHRRCAHNENYWLGGGYFAFGPGAARYVAGRRETNHRSTTR----YIQRMLAGES 301

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
            V E E L+ E+ A E L+ GLR  EGI   D+    G  +D    E     +RQG I R
Sbjct: 302 PVAEWEELTPEETARERLIFGLRRLEGIDPADFAAATGFTIDQLAGETLDRFERQGAILR 361

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               R+  ++ G+ + D++  +L 
Sbjct: 362 RD-DRICLSRAGLLVSDAIWPDLL 384


>gi|332292055|ref|YP_004430664.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332170141|gb|AEE19396.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 377

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 120/378 (31%), Positives = 195/378 (51%), Gaps = 9/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF  H       +E  I + ++E++  +       +S+++FGGG
Sbjct: 3   SIYIHIPFCKQACHYCDF--HFSTTMGKKEEMITAIMSELEMRKAEFENDEVSNVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    I  I+D    ++T+  N EIT+EANP  +          + +NR+S+GVQS
Sbjct: 61  TPSVLNTVEIEQIIDACYTHYTIEENPEITLEANPDDLIPEKISELAASRINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA+EAI  + L+R  FP  S DLIY +P  T  +WE  + +AL   V
Sbjct: 121 FFEEDLKLMNRAHNATEAIDCLVLSRKQFPNSSLDLIYGIPGMTNERWEENIDQALKLDV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T      K G ++   + VA + + L        G   YE SN +  
Sbjct: 181 PHISAYALTVEPKTALENFIKKGIVLPVEDEVAQEHHELLIRKMEEAGYENYEFSNFAKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW+   YIGIGP AHS     ++R A +I  +P+ ++K +        E E
Sbjct: 241 GFHSRNNTAYWQGKKYIGIGPSAHSY---DNNRRAWNINNNPK-YIKAITAGELP-QEVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRLR 377
            LS   Q +E++M  LR + G+S+ +   L G           Q+  +  +  ++  R+ 
Sbjct: 296 ELSLTDQYNEYVMTRLRTQFGVSLTEIATLYGDKYKDYFIEYSQKHVEEHLLFIEGDRVY 355

Query: 378 CTQRGMTMLDSVIANLAV 395
            +++G  + D + ++L +
Sbjct: 356 VSKKGKFLSDGIASDLFI 373


>gi|302671372|ref|YP_003831332.1| oxygen-independent coproporphyrinogen III oxidase HemN2
           [Butyrivibrio proteoclasticus B316]
 gi|302395845|gb|ADL34750.1| oxygen-independent coproporphyrinogen III oxidase HemN2
           [Butyrivibrio proteoclasticus B316]
          Length = 389

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 130/390 (33%), Positives = 208/390 (53%), Gaps = 18/390 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFCV+KC YCDF S   +     +++  +   E+          +I SIFF
Sbjct: 5   KELSLYIHVPFCVRKCLYCDFLSFNCKAGE-IKSYFNALDAEIAMACNSYRDFTIKSIFF 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++  +I   L+ I +N+ V  N EI+IE NP+S  ++    YR+AG+NRIS+G
Sbjct: 64  GGGTPSFVDSAHICNTLEHIRENFQVDVNAEISIEVNPASAILDKLTDYRRAGINRISIG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QSL +  L+ +GR HN++        AR   F  ++ D++ ALP QTM  +   L++ +
Sbjct: 124 AQSLNDGELKKIGRAHNSAMFYETFANARKAGFDNINIDIMSALPDQTMDSYMETLEKVV 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   +H+S Y L +E+GT FY M    DL LP E+    +Y+ T+   + +G H YEISN
Sbjct: 184 SLGPEHISAYSLIVEEGTPFYDM----DLNLPDEDTDRQMYHETRRFLAQNGYHRYEISN 239

Query: 256 HSF-----LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK---M 307
           ++         E  HN  YWR G+Y+G+G GA S       +       +    L     
Sbjct: 240 YAKGSDGDKTCECYHNKVYWRRGNYLGLGLGASSMTDDSRWKNISDFNLYQSILLDNTSF 299

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--- 364
           + K      E E LS     +EF+ +GLRL EG+S+ +++ L GR++     + +++   
Sbjct: 300 LDKFHQLRTEFEKLSRSDCMEEFMFLGLRLVEGVSISEFKSLFGRDIYDVYGKIIEKYIS 359

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  +E+     +R T+ GM + ++V+A+  
Sbjct: 360 EELLEQ-NGDHIRLTETGMDVSNTVMADFL 388


>gi|323180415|gb|EFZ65967.1| oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Escherichia coli 1180]
          Length = 362

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 125/370 (33%), Positives = 196/370 (52%), Gaps = 15/370 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH  + +V  ++++Q  L ++         R + +IF GGGTPSL+    +
Sbjct: 2   QKCPYCDFNSHALKGEVPHDDYVQHLLCDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAM 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GVQS  E  L+ LG
Sbjct: 62  QTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGVQSFSEDKLKRLG 121

Query: 150 RNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A+     HLS YQLT
Sbjct: 122 RIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           IE  TLF         VLP ++   D++     + +A G   YE S ++    +  HNLN
Sbjct: 182 IEPNTLFGSRPP----VLPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKSSYQCQHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YWR+GDYIGIG GAH +V     R+  + + +HP  +++     G  +  +  + +  + 
Sbjct: 238 YWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQ-----GRYLESQRDVEAADKP 292

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTM 385
            EF M   RL E     ++    G   D+          QG++        + T+ G   
Sbjct: 293 FEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECA-DYWQITEHGKLF 351

Query: 386 LDSVIANLAV 395
           L+S++  L +
Sbjct: 352 LNSLL-ELFL 360


>gi|298383728|ref|ZP_06993289.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           1_1_14]
 gi|298263332|gb|EFI06195.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           1_1_14]
          Length = 376

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 186/379 (49%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S  R     +  ++ +   E+   ++      I +I+FGGG
Sbjct: 3   GIYLHIPFCKTRCIYCDFYSTTRSEL--KTRYVHALCHELGMRKEYLKGEPIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E  +   I + I +N+ +    EIT+EANP  +     +       NRIS+G+Q+
Sbjct: 61  TPSQLEEADFKRIFETIRENYGMEHCREITLEANPDDLSQEYLKMLSSLPFNRISMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ +LR L R HN+  AI A+   R   F  +S DLIY LP +T  +WE +L++A+   
Sbjct: 121 FDDTTLRLLKRRHNSQTAIEAVRRCREAGFQNISIDLIYGLPGETKGRWENDLRQAIRLD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S Y LT E+ T  Y M K   +    E+ ++  + L        G   YEISN   
Sbjct: 181 VEHISAYHLTYEEDTPIYNMLKQHQIEEVDEDSSLQFFTLLIEHLQNAGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN +YWR   Y+G GP AHS           SI    + ++K + +N     E 
Sbjct: 241 PDKYSRHNTSYWRGIPYLGCGPSAHSFNGATREWNVSSI----DLYIKGIERNQRD-FET 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L    + +EF++  +R   G  ++  +   G  L   C +        G +  +    
Sbjct: 296 ENLDQTTRYNEFIITTIRTVWGTPIEKLKQEFGNELWEYCRKMSAPYLENGKLV-IHEGA 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ G+ + DS++++L 
Sbjct: 355 LRLTREGIFISDSIMSDLL 373


>gi|239906448|ref|YP_002953189.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           magneticus RS-1]
 gi|239796314|dbj|BAH75303.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           magneticus RS-1]
          Length = 375

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 185/377 (49%), Gaps = 10/377 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S         E +  +   E++   +  G   + +I+FGGGT
Sbjct: 3   LYIHVPFCRSKCRYCAFVSRPL-DMAEVEVYATALPLEIRHFGKKLGRPKVETIYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNNFQGYRKAGVNRISLGVQS 139
           P+L+ P  ++ IL  I +++ V   VE T E NP S ++         AGVNR+SLGVQS
Sbjct: 62  PTLLPPWALSRILPEITRHFDVHPAVEWTFEGNPDSALDQQYLSILVGAGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ LGR H+A  A  A   AR   F  +S DLI+ LP Q    W  +L+ A+   
Sbjct: 122 FSDAMLKTLGRPHDARTAQLAFEAARKAGFANISLDLIWGLPGQREASWMEDLKAAVRLR 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y LT+E GT      + G+L LP +     +Y          G   YEISN++ 
Sbjct: 182 PEHLSCYGLTLEPGTPLAASAEAGELELPPDGEQGRMYVHGAEFLEEQGYLQYEISNYAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G +S HN  YW   DY+G+GPGA S V    H       +    W  +  K G   V  
Sbjct: 242 MGFQSRHNSGYWEGRDYLGLGPGAVSTVAGVRHEN----PRDVRDW-AVQAKVGRCGVGG 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSRL 376
             LS E++  E +M+ LR  +G+ +  ++ L G +   E E      RQ  + R+    L
Sbjct: 297 VALSREERIRELVMLSLRTAKGLRLGLYKRLTGIDFLKENEALVTALRQKELVRLSAGHL 356

Query: 377 RCTQRGMTMLDSVIANL 393
           R T+ G  + + ++  L
Sbjct: 357 RLTKNGFLVSNLILERL 373


>gi|312144018|ref|YP_003995464.1| oxygen-independent coproporphyrinogen III oxidase [Halanaerobium
           sp. 'sapolanicus']
 gi|311904669|gb|ADQ15110.1| oxygen-independent coproporphyrinogen III oxidase [Halanaerobium
           sp. 'sapolanicus']
          Length = 384

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 194/382 (50%), Gaps = 9/382 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S    +Y+H PFC  KCPYCDF S V   K   + +  +   E+  + +    + + SI+
Sbjct: 8   SEPSALYIHIPFCHSKCPYCDFYS-VEYNKKRVDLYWAALFKELDDIIKSVDNKLLRSIY 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSLI  + I ++L+ I  ++ +    EITIEANP S+       Y+++G+NRISL
Sbjct: 67  IGGGTPSLICGEKIFILLNKIRNSFNLPPTAEITIEANPFSLNEEKIILYKRSGINRISL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS   + L FLGRN    + I AI L +  F   S DLI+ALP Q++  ++ +L+   
Sbjct: 127 GVQSFNNKYLNFLGRNSTRKKNINAIKLLKKYFDNYSIDLIFALPGQSVKDFKKDLEVLT 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S+   H+SLY L I + T FY     G+  LP++ +  ++YNL Q        + YEISN
Sbjct: 187 SFNPPHISLYNLEIHEQTPFYDKLNKGEFKLPADKIDAEMYNLAQQFLLKADYNNYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G  + HN  YW Y  YIG+GPGA        ++    + K+ +S+   +       
Sbjct: 247 FAKSGYRAQHNYLYWNYKRYIGLGPGAAGFNGRIRYKNNADLNKYLKSFSDHLEIEK--- 303

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQ 372
            E   LS E    E+  + LR + G+S+  + +   ++ +        NL+R+  +E   
Sbjct: 304 -EINILSKEDMMAEYCFLALRTQAGVSLHRFNLKFKKDFNSIFRDSVDNLKRKSLLEE-S 361

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R+  T +G  + + V     
Sbjct: 362 NQRIYLTAKGKLLANEVFLAFL 383


>gi|167746556|ref|ZP_02418683.1| hypothetical protein ANACAC_01266 [Anaerostipes caccae DSM 14662]
 gi|167653516|gb|EDR97645.1| hypothetical protein ANACAC_01266 [Anaerostipes caccae DSM 14662]
          Length = 378

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 121/386 (31%), Positives = 198/386 (51%), Gaps = 14/386 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +  L +Y+H PFC +KC YCDF S          ++I+    E+    +L    S+S++
Sbjct: 2   KTRELELYLHIPFCKRKCSYCDFCSFPAGDDE-ISSYIRKLRQEILHWGRLLKRPSVSTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI    I  +++ +  +++ + N+E TIEANP +V       Y+  G+NRIS
Sbjct: 61  FIGGGTPSLIPGAQIESLMNTVRDSFSCTENMECTIEANPGTVTREKLSAYQNCGINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+QS  E+ L+ LGR H   + ++  ++AR+  F  ++ DL+ A+P QTM   E  L R
Sbjct: 121 FGLQSAREEELKILGRIHTFEDFVSGFYMARDCGFQNINVDLMNAVPLQTMETMEQTLLR 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +HLS+Y L IE+GT FY M    DL LP+E+    +Y  T+ I    G   YE+
Sbjct: 181 TAELEPEHLSVYSLIIEEGTPFYDMKGLDDL-LPTEDEDAAMYERTEKILHTLGYERYEL 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G E  HN  YW    Y+G G  A S  +         +EK+          +  
Sbjct: 240 SNYARPGYECRHNCGYWTGKPYLGFGLAASSYFRGKRFTNPADMEKYLS------ITDFS 293

Query: 314 AVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIE 369
            + EKE  L+ +++ +E++ +GLR+ +GIS  ++    G  +       +Q    +G +E
Sbjct: 294 GIFEKETELTKKEEMEEYMFLGLRMTKGISKTEFSKRFGTGILDVYREPIQELSGKGLLE 353

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
           +    R+   Q+ + + + V+    +
Sbjct: 354 Q-DAERIWIPQQALFLSNQVMMEFLL 378


>gi|120434442|ref|YP_860148.1| oxygen-independent coproporphyrinogen III oxidase [Gramella
           forsetii KT0803]
 gi|117576592|emb|CAL65061.1| oxygen-independent coproporphyrinogen III oxidase [Gramella
           forsetii KT0803]
          Length = 374

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 113/378 (29%), Positives = 188/378 (49%), Gaps = 12/378 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   ++    E++  +   G ++I +++FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSTKKKSELVEMLCKELELRKDEIG-QTIQTVYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + +  I   I + + VS + EIT+EANP  +     +   K+ VNR+S+GVQS
Sbjct: 60  TPSLLNSEELDSIFKTIFEYYEVSKDAEITLEANPDDLSEEVIKVLDKSPVNRLSIGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                L+ + R HNA EA+A++ LAR  F  +S DLIY +P Q+  QW+  L+ AL   +
Sbjct: 120 FFGADLKLMNRAHNAQEALASLQLARRYFDNISIDLIYGIPGQSNEQWKENLKIALELDI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  + G +   ++    + +++  +  +++G   YE SN+   
Sbjct: 180 PHISSYALTVEPKTALEKFIEKGKVKPVNDEQYREQFDILVNALTSNGFEHYEFSNYGKP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N+ YW    Y+GIGP AHS           +       ++K + ++     + E
Sbjct: 240 GYHSQNNMAYWLGKSYLGIGPSAHSYDGSSRKWNISNN----ALYIKSLEQDKIP-QQTE 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSRL 376
            LS     +EF+M  LR + G+   D +   G        +      + G I++ + +  
Sbjct: 295 KLSVTDSYNEFVMTRLRTKFGVCASDIQEKFGEKYRGHFLKESEKFLKDGLIKKTENT-F 353

Query: 377 RCTQRGMTMLDSVIANLA 394
             T  G  + D + A L 
Sbjct: 354 HITSEGKFLSDGIAAELF 371


>gi|254497840|ref|ZP_05110606.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           drancourtii LLAP12]
 gi|254352918|gb|EET11687.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           drancourtii LLAP12]
          Length = 410

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 208/380 (54%), Gaps = 10/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + + N++Q+ L ++         R ISSIF G
Sbjct: 38  PLSLYIHIPWCIRKCPYCDFNSHKSPEVLPEVNYVQALLADLNADLLRFNAREISSIFIG 97

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +   L+   + K    +SN+EIT+EANP SVE   F  YR+ G+NR+SLG+
Sbjct: 98  GGTPSLFSAEAYNLLFTELKKILPFASNIEITMEANPGSVEQQRFTDYRQIGINRLSLGI 157

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR H+A +A  AI  ARN  F  ++ D+++ LPKQ++ Q   +L+ ALS
Sbjct: 158 QSFNPEHLKVLGRVHDAQQAHRAIESARNAGFNNLNLDIMHGLPKQSIAQGIEDLRTALS 217

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +H S YQLTIE  T+FYK     +  LPSE+ A  L     ++    G   YEIS  
Sbjct: 218 YRPEHFSWYQLTIEPNTVFYK----ENPPLPSEDEAYFLEEQGFALLKEAGFTRYEISAF 273

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +    ++ HNLNYW +GDY GIG GAH ++   +  +     + P+ +L + +     + 
Sbjct: 274 AKPNKQARHNLNYWLFGDYFGIGAGAHGKLTTTTEILRTRKHRQPKDYLDVAK---PFLA 330

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-NLQRQGFIERVQFSR 375
             E + +++   EF++   RL + I ++ +       +D+   +  +  Q  +  +  + 
Sbjct: 331 NIELVDTKELLFEFMLNTTRLEQAIPLELFTERTRLPIDLLLTQLKIAEQKKLISLSETH 390

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            + T  G    ++ +  L +
Sbjct: 391 WQVTSLGRRYTNN-LQELFL 409


>gi|326791217|ref|YP_004309038.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           lentocellum DSM 5427]
 gi|326541981|gb|ADZ83840.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           lentocellum DSM 5427]
          Length = 376

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 121/381 (31%), Positives = 196/381 (51%), Gaps = 10/381 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            +G+Y+H PFC  KC YCDF S   +    QE ++ + + EM+  ++ L    +I SIF 
Sbjct: 2   PIGLYIHIPFCASKCYYCDFLSF--KRHEKQEAYVDALIQEMEQTKKDLVSGTTIKSIFI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  +  +L  +   + +  + E TIEANP ++++   Q  RK  + RISLG
Sbjct: 60  GGGTPTVLPPLLLDKLLKAVVSCFNIEPDAEWTIEANPGTIDIEKLQVLRKYPITRISLG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  +  LR +GR H   +   +I L +      ++ DL++ALP QT   +   L    
Sbjct: 120 LQSTHDDLLRKIGRIHTFKDWEESIGLIKQHTSWEINTDLMFALPGQTEEAFLETLNTVT 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +Y +DHLS+Y L IE+GT FYK++++G L + S+ +   +Y+  Q   +  G   YEISN
Sbjct: 180 AYDIDHLSVYALIIEEGTTFYKLYEEGKLEVASDELDRRMYHTAQRYLNDKGYIQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S       HN  YW+   YIGIG GAHS +    +      E + E++L          
Sbjct: 240 WSKPDKSCKHNAIYWQLEPYIGIGLGAHSLMNHARYYN----ETNMEAYLSAAGNLSLLR 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQF 373
            E+E L+ E    E++ +GLRL +GI    +E   G ++       L +  +  +     
Sbjct: 296 KEEEKLTKEMAMQEYMFLGLRLLQGIDTLAFEKRFGESVWQVYNEQLTKWIKYNVLVKDK 355

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            R+  +  G+ + + V A+  
Sbjct: 356 ERIYLSPYGLDVCNEVFASFL 376


>gi|150015713|ref|YP_001307967.1| coproporphyrinogen III oxidase [Clostridium beijerinckii NCIMB
           8052]
 gi|149902178|gb|ABR33011.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium beijerinckii NCIMB 8052]
          Length = 375

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 117/383 (30%), Positives = 198/383 (51%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC +KC YCDF S+  +  +  E +I++   E+    Q      ISSIF 
Sbjct: 2   RDISLYIHIPFCKQKCFYCDFPSYSGKEGLMNE-YIEALSNEI---LQKGKEYRISSIFI 57

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +   ++  +L  + K   +  ++E T+E NP ++   N    ++  VNRIS+G
Sbjct: 58  GGGTPSYLNDLSLEKLLGTLNKL-NLKDDLEFTVECNPGTLNEKNLNIMKEHNVNRISMG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +   L+ +GR H+  E      LAR   F  ++ DL++ LP QT+  WE  L++A 
Sbjct: 117 LQSTKNSLLKDIGRIHSYEEFEENYFLARKLGFNNINVDLMFGLPNQTIEDWECSLRKAA 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +DH+S Y L IE+GT FY ++++  L LP E+    +Y  T+ I + +G H YEISN
Sbjct: 177 ELELDHISAYSLIIEEGTRFYNLYEEDKLNLPEEDKERIMYLTTKDILNGYGYHQYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +S    E  HN  YW+  +Y+G+G  A S +     +       + + ++K +      +
Sbjct: 237 YSKKSKECFHNKVYWKCDEYLGMGVSASSFIDKKRSKNI----DNIKEYIKRINNKESVI 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
            E      +   +EFL MGLR+ EGI V+ ++    +++     E      ++G +    
Sbjct: 293 EEIHLNDIKDDMEEFLFMGLRMIEGIKVEKFKERFNKDIYEVYGEIIEKNIKKGLL-INN 351

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              L  T  G+ + + V+++  +
Sbjct: 352 SGNLYLTSHGIEISNYVMSDFIL 374


>gi|317151904|ref|YP_004119952.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942155|gb|ADU61206.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 418

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 191/386 (49%), Gaps = 13/386 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G   L +Y+H PFC  +C YC F+S     +V    + +  L E++          + +I
Sbjct: 36  GDTGLLLYIHVPFCRSRCHYCTFHSQAF-NQVTFAWYHKLLLQEIKLWGARLKRPPLRTI 94

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNNFQGYRKAGVNRI 133
           +FGGGTPSLI    +  I+  +   +T+   +E+T+EANP S  +V+ F+     GVNR+
Sbjct: 95  YFGGGTPSLIPLNQLQQIMKVLDAAFTLGPAMEVTLEANPDSATDVSYFRALLSMGVNRL 154

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQSL +  L  +GR H+A+ A A+   AR   F  +  D I+ LP Q +  W  +L 
Sbjct: 155 SLGVQSLSDVDLHAMGRPHSAAMAYASYDSARQAGFGNIGLDFIWGLPGQRLKSWIDQLN 214

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              S   +H+S Y LT+E  T    +  + G L LP +     ++        + G   Y
Sbjct: 215 VVTSMRPEHISAYNLTLEPNTPMTALCAEGGPLTLPPDKEQGRMFIYGAEYLESMGYMHY 274

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN + +G  S HN  YW   DY+G+GP A S +     R      ++ + +   VR  
Sbjct: 275 EVSNFARMGFVSRHNSGYWGGADYLGLGPSAVSTIG----RRRFENPRYMDEYDAYVR-G 329

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFI 368
           G    + E LS      E +M+ LR  +G+ +K++   AG +L    ER    L R+  +
Sbjct: 330 GLVGRDHETLSDADLLKELVMLSLRTAKGLDLKEFRQRAGYDLVKRQERLVMALHRENLV 389

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
            R+    LR T+ GM + + +I  LA
Sbjct: 390 -RINHGFLRLTKNGMLVSNVIIRRLA 414


>gi|224026723|ref|ZP_03645089.1| hypothetical protein BACCOPRO_03480 [Bacteroides coprophilus DSM
           18228]
 gi|224019959|gb|EEF77957.1| hypothetical protein BACCOPRO_03480 [Bacteroides coprophilus DSM
           18228]
          Length = 376

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 191/379 (50%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S  +  K  +  +IQ+   E++  +       I +I+ GGG
Sbjct: 3   GIYLHIPFCKRRCIYCDFFSTTQADK--RREYIQALCRELEMRKDYLQGEDIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   + + I + + V+   EIT+EANP  +     +   +   NR+S+G+Q+
Sbjct: 61  TPSQLEKEDFEQLFETIFRIYPVNDQAEITLEANPDDLTPEYLKMLSQQPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E +L+ L R H A +AI A + +R   F  +S DL+Y LP +T   WE +LQ+AL   
Sbjct: 121 FNEHTLKLLHRRHTAQQAIEAFYQSREAGFRNISIDLMYGLPGETAEGWEYDLQQALQLQ 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+ T  + + +   +    E+++V L+         HG   YEISN S 
Sbjct: 181 PEHISAYHLIYEENTALWTLREQHRVEEADEDLSVTLFKQLIHRLKEHGYQHYEISNFSL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS           S++K+          N   + E 
Sbjct: 241 PGFHSRHNSSYWTGKKYLGCGPSAHSYNGTSRQWNIASLDKYIAGI-----NNHAPIYEI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L    + ++F++  +R   G+S+   +   G  L   C R  +    QG +E    + 
Sbjct: 296 ENLDLYTRYNDFVITTIRTSAGMSLTLLKNTFGDTLYNYCLRMARPHLNQGTLEITNNT- 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T+ G+ + D +++++ 
Sbjct: 355 LKLTEAGIFISDGIMSDML 373


>gi|317508577|ref|ZP_07966238.1| HemN protein [Segniliparus rugosus ATCC BAA-974]
 gi|316253121|gb|EFV12530.1| HemN protein [Segniliparus rugosus ATCC BAA-974]
          Length = 399

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 122/395 (30%), Positives = 183/395 (46%), Gaps = 19/395 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMR-- 63
           ++++       GVYVH PFC  +C YCDFN++      G+     ++ +   E+      
Sbjct: 13  DSLSPSPDAPFGVYVHVPFCASRCGYCDFNTYTPGELGGRSGTGEWLTALGQELDLAASA 72

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +  GP ++ ++F GGGTPSL+    +A +LD I   + ++ ++E T EANP S     
Sbjct: 73  LGRAGGPPTVRTVFVGGGTPSLLGAAGLARVLDAIGARFPMAESLEATCEANPESTSPAF 132

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
           F+G R AG  R+SLG+QS     L  L R H    A  A   AR      ++ DLIY  P
Sbjct: 133 FEGIRAAGYTRVSLGMQSEAAHVLAVLDRAHTPGRATRAAQEARASGIEHVNLDLIYGTP 192

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T       L   +   VDH+S Y LT+ +GT   +    G+L  P ++V  + + +  
Sbjct: 193 GETEPDLARSLAAVVQAPVDHVSAYALTVHQGTAMGRAVAKGELAAPDDDVLAERHAMVD 252

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +A G   YE+SN +    A   HNL YW+ GD+ G GPGAHS V      V     K
Sbjct: 253 EALAAAGFEWYEVSNWAKSPEARCRHNLGYWQGGDWWGAGPGAHSHVNG----VRWWNAK 308

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP     +       V   E L+ E++  E +M+ LR+REG++        G  LD    
Sbjct: 309 HPARHAALAASGRAPVAGFEALTDEERHTEDVMLRLRVREGVARAVLR---GPELD--RA 363

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L  +G +   Q  R+        + D +   L 
Sbjct: 364 AQLVAEGLLLE-QTDRIALAPSSRMLADGLAVRLL 397


>gi|15841901|ref|NP_336938.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis CDC1551]
 gi|148823590|ref|YP_001288344.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis F11]
 gi|167968733|ref|ZP_02551010.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Ra]
 gi|215404314|ref|ZP_03416495.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis 02_1987]
 gi|215412137|ref|ZP_03420901.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215427766|ref|ZP_03425685.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T92]
 gi|215431329|ref|ZP_03429248.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis EAS054]
 gi|215446630|ref|ZP_03433382.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T85]
 gi|218754116|ref|ZP_03532912.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis GM 1503]
 gi|219558381|ref|ZP_03537457.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T17]
 gi|253798535|ref|YP_003031536.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232525|ref|ZP_04925852.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis C]
 gi|254365163|ref|ZP_04981209.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551436|ref|ZP_05141883.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260201513|ref|ZP_05769004.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis T46]
 gi|260205690|ref|ZP_05773181.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis K85]
 gi|289746166|ref|ZP_06505544.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis 02_1987]
 gi|294994505|ref|ZP_06800196.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis 210]
 gi|297634990|ref|ZP_06952770.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis KZN
           4207]
 gi|297731983|ref|ZP_06961101.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis KZN
           R506]
 gi|306776654|ref|ZP_07414991.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu001]
 gi|306785177|ref|ZP_07423499.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu003]
 gi|306789538|ref|ZP_07427860.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu004]
 gi|306793863|ref|ZP_07432165.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu005]
 gi|306798259|ref|ZP_07436561.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu006]
 gi|306804136|ref|ZP_07440804.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu008]
 gi|306808707|ref|ZP_07445375.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu007]
 gi|306968537|ref|ZP_07481198.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu009]
 gi|306972766|ref|ZP_07485427.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu010]
 gi|307080471|ref|ZP_07489641.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu011]
 gi|313659317|ref|ZP_07816197.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis KZN
           V2475]
 gi|13882170|gb|AAK46752.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Mycobacterium tuberculosis CDC1551]
 gi|124601584|gb|EAY60594.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis C]
 gi|134150677|gb|EBA42722.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148722117|gb|ABR06742.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis F11]
 gi|253320038|gb|ACT24641.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 1435]
 gi|289686694|gb|EFD54182.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis 02_1987]
 gi|308214969|gb|EFO74368.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu001]
 gi|308330159|gb|EFP19010.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu003]
 gi|308333982|gb|EFP22833.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu004]
 gi|308337802|gb|EFP26653.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu005]
 gi|308341484|gb|EFP30335.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu006]
 gi|308344969|gb|EFP33820.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu007]
 gi|308349280|gb|EFP38131.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu008]
 gi|308353900|gb|EFP42751.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu009]
 gi|308357845|gb|EFP46696.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu010]
 gi|308361791|gb|EFP50642.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis SUMu011]
 gi|323719054|gb|EGB28202.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis CDC1551A]
 gi|328458303|gb|AEB03726.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 4207]
          Length = 390

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 114/387 (29%), Positives = 186/387 (48%), Gaps = 13/387 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           +        GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 13  LAPMPGQPFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 72

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 73  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 132

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 133 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 192

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 193 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 252

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 253 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEI 308

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +      V   E L ++    E +++ +RLR+G+ +           + E    +   G 
Sbjct: 309 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLARLGA-----AERERAEAVLADGL 363

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     RL  T RG  + D+V+  L 
Sbjct: 364 LD-YHGDRLVLTGRGRLLADAVVRTLL 389


>gi|332520040|ref|ZP_08396504.1| oxygen-independent coproporphyrinogen III oxidase [Lacinutrix
           algicola 5H-3-7-4]
 gi|332044599|gb|EGI80793.1| oxygen-independent coproporphyrinogen III oxidase [Lacinutrix
           algicola 5H-3-7-4]
          Length = 375

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 114/377 (30%), Positives = 194/377 (51%), Gaps = 9/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       ++  I + + E++  +      ++ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMKKKDELINALIKELEIRKTEFNNITVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  I+D +  N+ V  N EIT+EANP  +          + +NR+S+G+QS
Sbjct: 61  TPSLLSTLEINNIIDAVYSNYKVIHNPEITLEANPDDLNNQQIIKLSHSPINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HN+SEA + +  A   F  +S DLIY +P  T  +WE  +  ALS+ +
Sbjct: 121 FHEKDLKLMNRAHNSSEAKSCLVEATKYFNNISLDLIYGIPGTTNAEWEENIAIALSFGI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y LT+E  T      K G +    + +A + +++     + +    YE+SN    
Sbjct: 181 NHISSYALTVEPKTALASFIKKGIIDNVDDALAQEQFHILIEKLAQNNFIHYELSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW+   YIGIGP AHS           +  K    ++K +  N   + E E
Sbjct: 241 GFFSKNNSAYWQGKPYIGIGPSAHSFNGKQRGWNVRNNTK----YIKSIENNTLPI-EIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRLR 377
            L+   Q +E++M GLR   G+S++  +   G +  I   +  Q+  +  +  ++ ++L 
Sbjct: 296 TLTITDQYNEYVMTGLRTVWGVSIQKIDSDFGEHFKIYLLKQAQKFIKEQLLYIENNKLL 355

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G  + D + ++L 
Sbjct: 356 VTKKGKFLSDGIASDLF 372


>gi|253702167|ref|YP_003023356.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M21]
 gi|251777017|gb|ACT19598.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter sp.
           M21]
          Length = 381

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 211/380 (55%), Gaps = 7/380 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGG 78
           G+Y+H+PFC+KKC YCDFNS           +++  L EM+     L  P    +++ GG
Sbjct: 4   GLYLHFPFCLKKCLYCDFNS-TPAGGSDHRGYVELLLKEMELRQAALPEPVIAPTLYLGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ + LI+D   K++++  + E+T+EANP ++     QGYR AGVNR+SLG+Q
Sbjct: 63  GTPSLMAPELVGLIVDAARKSFSLEPDAEVTLEANPGTLTPERLQGYRSAGVNRLSLGIQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S E++ L+ LGR H+ +EA++A   AR   F  +S DL+++LP Q+++QW   L+ A+S 
Sbjct: 123 SFEDRLLKRLGRVHSCAEALSAYQDARRAGFDNISIDLMHSLPGQSLSQWREALELAVSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A +H+S Y L+IE+GT F ++H  G+L LP E  A  ++  T ++ S  G   YEISN++
Sbjct: 183 APEHVSAYALSIEEGTPFERLHDVGELPLPGEEEAAAMFEATAAVLSKAGYRHYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YW    Y+G G GAHS                  ++   +R    A  E
Sbjct: 243 KPGRHSRHNSAYWSRLSYLGFGAGAHSFWNPDGLGRRWKNPGEAAAYAAGIRVGIPADEE 302

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFS 374
            E L+ E    E   +GLR+ +G+ +       G +      +    L+++G + R + S
Sbjct: 303 PEQLTLEDALSECFFLGLRVLDGLDLAPLFERYGESALAPHLKQVAALEKKGALTR-EGS 361

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+R +   + + + + ++  
Sbjct: 362 RIRISPDAVILANGIFSSFV 381


>gi|72161239|ref|YP_288896.1| coproporphyrinogen III oxidase [Thermobifida fusca YX]
 gi|71914971|gb|AAZ54873.1| coproporphyrinogen III oxidase, anaerobic [Thermobifida fusca YX]
          Length = 410

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 115/390 (29%), Positives = 182/390 (46%), Gaps = 23/390 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN--------FIQSFLTEM 59
            + +   G+   G YVH PFC  +C YCDFN++       ++         +    + E+
Sbjct: 19  ADALAELGTRPFGFYVHVPFCATRCGYCDFNTYTAAELRSRDGTAVASPRTYADQAIAEI 78

Query: 60  QWMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
              R++ G R   + ++F GGGTP+L+ P+ +  ILD I   + ++ + EIT EANP +V
Sbjct: 79  ALARRVLGDRELPVRTVFMGGGTPTLLSPEELGRILDAIDAQFGLAPDAEITTEANPETV 138

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+AG  RIS G+QS +   L  L R H        +  AR   F  ++ DLI
Sbjct: 139 DAGILARLREAGFTRISFGMQSAKAHVLAVLERTHTPGRPEQCVAWARQAGFAHVNLDLI 198

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y  P ++   W+  L  A++   DH+S Y L +E+GT      + G+L    ++V  D Y
Sbjct: 199 YGTPGESDADWKESLTAAIAAGPDHISAYSLIVEEGTRLAARVRRGELTPFDDDVLADRY 258

Query: 237 NLTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
            +   + SA GL  YE+SN +    A S HNL YW  G + G+GPGAHS +      V  
Sbjct: 259 IMADELLSAAGLQWYEVSNWAADPTARSAHNLLYWTGGHWWGVGPGAHSHIGG----VRW 314

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              KHP ++   +         +E LS+  +  E +++ LR+ +G  +   +        
Sbjct: 315 WNVKHPAAYAARLAAGRTPAHAREILSAADRRFERILLELRIAQGCPLDLLDDAGRAAAA 374

Query: 356 IECERNLQRQGFIERVQFSRLR--CTQRGM 383
                 L     ++    +R R   T RG 
Sbjct: 375 RAVADGL-----LDAAAHARGRAVLTLRGR 399


>gi|310829111|ref|YP_003961468.1| hypothetical protein ELI_3546 [Eubacterium limosum KIST612]
 gi|308740845|gb|ADO38505.1| hypothetical protein ELI_3546 [Eubacterium limosum KIST612]
          Length = 379

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 111/383 (28%), Positives = 193/383 (50%), Gaps = 10/383 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+YVH PFC +KC YCDF S     +     +  +   E++      G     +++F
Sbjct: 2   ENVGIYVHVPFCRQKCRYCDFPSWAGLGEAEAGRYFDAVCLEIKAFAAEHGRLPAGTVYF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS +    I  ++D I + + +    +E TIEANP ++     + YR  G+NR+S+
Sbjct: 62  GGGTPSYVAAGYIGKVMDCIRECFKLPEAAIEATIEANPGTLTDAKCRAYRSMGLNRVSM 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+  ++ L+ LGR H  ++ +A++ L     F  +S DL++ LP QT+     ++ R 
Sbjct: 122 GLQTTSDRGLKALGRIHTCADFVASLDLLVGAGFENISADLMFGLPGQTLEDVRQDIDRL 181

Query: 195 LSYAV-DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++A   H+S Y L IE+GT F  +++ G L +P E +   + +      + +G   YE+
Sbjct: 182 TAFAPIKHISCYSLKIEEGTAFDTLYRQGKLPVPDEGLERQMQHAIIDGLAENGFEQYEL 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HN  YW    Y+G G GA S  K       +    + E +  +V +   
Sbjct: 242 SNFARNGWESRHNSLYWVMKPYVGFGLGAASYYKEERRTNVM----NMEDYCALVTQGKA 297

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERV 371
            V+E   L ++++  +F+ +GLR   G+   D+  L G +   + E   +L  +G + R 
Sbjct: 298 PVLEAHTLDAQEKKGDFMFLGLRRMCGVDDADYRELFGSSFFEDFEEIGSLVERGLLTR- 356

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +   +R T +G  + + V     
Sbjct: 357 EDQVIRLTPKGQDLANQVFVAFV 379


>gi|289553823|ref|ZP_06443033.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 605]
 gi|289438455|gb|EFD20948.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis KZN 605]
          Length = 381

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 114/387 (29%), Positives = 186/387 (48%), Gaps = 13/387 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           +        GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 4   LAPMPGQPFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 63

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 64  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 123

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 124 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 183

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 184 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 243

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 244 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEI 299

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +      V   E L ++    E +++ +RLR+G+ +           + E    +   G 
Sbjct: 300 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLARLGA-----AERERAEAVLADGL 354

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     RL  T RG  + D+V+  L 
Sbjct: 355 LD-YHGDRLVLTGRGRLLADAVVRTLL 380


>gi|57651976|ref|YP_186480.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           COL]
 gi|161509811|ref|YP_001575470.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|282920132|ref|ZP_06327857.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9765]
 gi|57286162|gb|AAW38256.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Staphylococcus aureus subsp. aureus COL]
 gi|160368620|gb|ABX29591.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|282594480|gb|EFB99465.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9765]
          Length = 385

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|325281306|ref|YP_004253848.1| oxygen-independent coproporphyrinogen III oxidase [Odoribacter
           splanchnicus DSM 20712]
 gi|324313115|gb|ADY33668.1| oxygen-independent coproporphyrinogen III oxidase [Odoribacter
           splanchnicus DSM 20712]
          Length = 373

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 108/382 (28%), Positives = 187/382 (48%), Gaps = 15/382 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G+YVH PFC  KC YC F S        ++ +I +   E+Q  +       + +++FGG
Sbjct: 1   MGIYVHIPFCRSKCYYCGFYSVASTQL--KKAYIAALGHEIQLRKDYLDTSEVKTLYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    +  I+  +  N+ ++   E TIEANP  +  +  +G+R  G +R+S+G+Q
Sbjct: 59  GTPSWLSMDELTDIVTTLEMNFALNCVAERTIEANPEDITRDKLKGWRALGFDRLSIGIQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+ + R H A +A+ ++   A + F  +  DLI  LP  T    + +++     
Sbjct: 119 SFNDEVLKRINRTHTAQDALRSVEWAADSGFENIGIDLILGLPGYTRLHLQQDMEIVNHL 178

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + HLS+Y L+I+  T+F K+ + G     +++   D Y        + G   YEISN +
Sbjct: 179 PIIHLSVYLLSIDSNTVFEKLMQKGRFQPQTDDELADQYLWVSDYLKSIGFEHYEISNFA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                SLHN +YW+   Y+G GP AHS               H +S++  +  +  +  E
Sbjct: 239 KNSKYSLHNTSYWQQQKYVGFGPAAHSF----DLNSRQWNVAHLKSYIDNLANDRLS-FE 293

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQF 373
           KE L+ + + +E++M  LR   GI  +  ++    +        L    F+E      Q 
Sbjct: 294 KEILTDKDKFNEYIMTNLRTMWGIQEEKMQLQFP-DFSKTVRPKLA--PFLENGSVVCQN 350

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
            R+R T++G  + D V ++L V
Sbjct: 351 GRIRLTEKGWLVSDDVFSDLFV 372


>gi|254414629|ref|ZP_05028394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microcoleus chthonoplastes PCC 7420]
 gi|196178477|gb|EDX73476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microcoleus chthonoplastes PCC 7420]
          Length = 409

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 122/402 (30%), Positives = 199/402 (49%), Gaps = 31/402 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG------QENFIQSFLTEMQWMRQLTGPRSISS 73
             Y+H PFC ++C YCDF   V   K         E +++    E+Q         S+S+
Sbjct: 6   SAYIHIPFCRRRCYYCDFPVSVVGDKARGSTSGTIEEYVEVLAQEIQTTPA--STCSLST 63

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+  Q +  ILD +A+ + ++++ EI++E +P + +++  +GYR AGVNR+
Sbjct: 64  IFFGGGTPSLLSTQQLNRILDTLAQQFGITTDAEISMEIDPGTFDLSQIKGYRDAGVNRV 123

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +++ L   GR+H  +    A+ L R +  P  S DLI  LP QT+ QW+  L 
Sbjct: 124 SLGVQAFQDELLGICGRSHQLNHIFTAVELLRQVEVPDWSLDLISGLPTQTLEQWQESLA 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+  A  H+S Y LTIE  T F + +  G   LP++     +Y L Q + +  G   YE
Sbjct: 184 AAIQLAPTHISCYDLTIEPVTAFGRQYSPGISPLPTDETTAQMYRLAQQLLTDAGYEHYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++    +  HN  YW    + G G GA S ++        +  ++     + ++  G
Sbjct: 244 ISNYALPTHQCRHNRVYWENRPFYGFGMGAASYIQARRFTRPRTRREYYAWVEQFIQAGG 303

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIE 369
             V++     +     E +M+GLRL +G+S+       G  L     R+LQ    +G+I 
Sbjct: 304 --VLDSPLSRTTDILLETVMLGLRLADGLSLSALREKFGETLIERIWRSLQPSVDKGWIT 361

Query: 370 RVQF----------------SRLRCT-QRGMTMLDSVIANLA 394
            V                   R+R +   G    ++++A++ 
Sbjct: 362 IVTPDGSVIDMQAVSNRPISGRIRLSDPNGFLFSNTILADIF 403


>gi|297243454|ref|ZP_06927386.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis AMD]
 gi|296888499|gb|EFH27239.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis AMD]
          Length = 440

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 119/428 (27%), Positives = 196/428 (45%), Gaps = 35/428 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLT 57
           ++  +    +     S    VYVH PFC+++C YCDFN++  R       +E +    + 
Sbjct: 3   LELDAELNKSAMQTKSMPFEVYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIR 62

Query: 58  EMQWMRQLTGPRSI-----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           EMQ +++      I      S+FFGGGTP++++ +++  IL  I   W + +  EIT EA
Sbjct: 63  EMQLVKKWQEYHGIFESKAQSVFFGGGTPTVLKARDLVRILQEIRNLWGLKTGAEITTEA 122

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           NP + +    +   + G  RIS G+QS     L+ L R H        ++ A     R S
Sbjct: 123 NPDTADEKYIETLAEGGFTRISFGMQSAVPHVLKTLDRTHTPENVTRGVNAANACGLRSS 182

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY  P +++  W   ++ ALS  V+H+S Y LT+E  T   +    G +  P+++  
Sbjct: 183 VDLIYGAPGESLDDWRKSVEMALSLGVNHISAYALTVEPRTKMGRQIAAGTIQAPNDDDE 242

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
              Y L   + ++ GL  YEISN +  G ES HNL YWR  D+ GIGPGAHS     +H 
Sbjct: 243 AAKYELADELFNSAGLQWYEISNWAHPGFESRHNLGYWRNIDWAGIGPGAHSHYNAANHI 302

Query: 293 VAISIEK-------------------HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
              S++                    HP+ W   +          E +++E    E +M+
Sbjct: 303 SKQSMDDEASLADSNEFYNLRAWDILHPKRWAHAINLGNVPWQNYECINAEDALIEEVML 362

Query: 334 GLRLREGISVKDWEML-------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           GLR++EG+ +                +   +  R + ++      +  R+  T++G  + 
Sbjct: 363 GLRIKEGLDISQLCEKMRETNKVFDDSHLQKVLREVCKEDLAVLHEN-RIIATRKGRLLN 421

Query: 387 DSVIANLA 394
           D +I  + 
Sbjct: 422 DLLIERIV 429


>gi|313203090|ref|YP_004041747.1| oxygeN-independent coproporphyrinogen iii oxidase [Paludibacter
           propionicigenes WB4]
 gi|312442406|gb|ADQ78762.1| oxygen-independent coproporphyrinogen III oxidase [Paludibacter
           propionicigenes WB4]
          Length = 375

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 126/380 (33%), Positives = 199/380 (52%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF + V    +   + ++  + E+   +      +IS+I+FGGG
Sbjct: 3   GIYIHIPFCSKRCTYCDFYTEVAPDLIP--DLVKHLVKEINIRKDYLKNETISTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  +  + ILDGI   +TV  N EIT EANP  + V+ F   +    NRIS+G+QS
Sbjct: 61  TPSILSREQFSEILDGIFAVYTVEENAEITFEANPDDLTVDFFDSIKYLPFNRISIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ + R H A +AI A+  A+N  F  +S DLIY LP Q++  WE +L  ALS  
Sbjct: 121 FDDNDLKRINRRHTADQAIKAVKNAQNAGFDNISIDLIYGLPLQSIEDWEKQLDIALSLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT E+GT  +K  + G +    +    ++Y L        G  AYEISN + 
Sbjct: 181 IQHVSAYGLTYEEGTALWKQREKGLVKPIIDETMNEMYLLLVKKMKEKGFEAYEISNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+GIGP AHS   V       SI    ++++  +  N     EK
Sbjct: 241 DGFRSKHNSSYWKQNSYLGIGPSAHSYDLVSRQWNVASI----KAYIAALENNT-PYFEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV----QFS 374
           E L+   + ++++M+ LR  +G+         G+NL      N++   +IE         
Sbjct: 296 EELTLYDRYNDYVMVSLRTSDGLDFDFLSSEFGQNLASYFLDNIRI--YIENNSVIQSDG 353

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           +   T +G+ + + ++  L 
Sbjct: 354 KYSLTPQGIMISNQILIQLI 373


>gi|332877539|ref|ZP_08445286.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684645|gb|EGJ57495.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 396

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 119/396 (30%), Positives = 198/396 (50%), Gaps = 27/396 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIF 75
           G+Y+H PFC  +C YCDF S    Y    + +I +   E++              I +I+
Sbjct: 3   GIYIHIPFCTSRCVYCDFYS--TTYGEKDKAYISALTNELRLRANYLQQDGQMPVIETIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS ++   +  I + + + + VS   EITIEANP  +     +  R   VNR+S+
Sbjct: 61  IGGGTPSTLDTSLLEPIFEVLYRTYHVSDRAEITIEANPDDLTPQKIKSLRTLPVNRLSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ ++  LR L R HN  +AI A+H  ++  F  +S DLIY LP Q++ +WE ++  A
Sbjct: 121 GVQTFDDGKLRLLHRRHNGEQAIRAVHDCQDAGFDNISIDLIYGLPAQSLREWETDVNTA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS  V H+S Y L  E+GT  ++M K   +    E +++++++L        G   YEIS
Sbjct: 181 LSLNVQHISAYALIYEEGTPLWEMRKRHVVEEADEELSLEMFSLLMYRLENAGFEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK---- 310
           N +  G  S HN +YW+   Y+G GP AHS       R           ++  V K    
Sbjct: 241 NFARPGLRSRHNSSYWKGIPYLGCGPSAHSF----DGRNRQWNHPDLNVYIDQVGKCLSS 296

Query: 311 ---NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---R 364
              N    +E+E L+  ++ ++ ++  LR  +G+++ + +   G+ L   C +      R
Sbjct: 297 EDFNHAPWIEQEELNLYERYNDCIITSLRTSDGLNLSELKRKFGQPLTDYCLQAAAVHLR 356

Query: 365 QGFIERVQ------FSRLRCTQRGMTMLDSVIANLA 394
            G +E  +         L+ T+RG+ + D ++++L 
Sbjct: 357 NGQLEITEKKEQAPEGLLKLTRRGIFLSDGIMSDLL 392


>gi|28211656|ref|NP_782600.1| coproporphyrinogen III oxidase [Clostridium tetani E88]
 gi|28204098|gb|AAO36537.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 382

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 117/383 (30%), Positives = 206/383 (53%), Gaps = 14/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC +KC YCDF S+  + +   + +I++   E+   ++    + I SI+ 
Sbjct: 9   KNIGLYIHIPFCKEKCKYCDFISY-SKKESFMKEYIEALSKEI---KRECMDKKIRSIYI 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS + P     IL     N   S N+E +IEANP +V     + +++ G+NRIS G
Sbjct: 65  GGGTPSYV-PNKYWEILKETIDNLNKSKNLEFSIEANPGTVTEEKLKFFKEMGINRISFG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ +   L  LGR HN  E + +  LAR + F  ++ DL++ +P Q +  W+  L++ +
Sbjct: 124 LQAWQHHLLNKLGRIHNIEEFLYSYKLARKLGFDNINVDLMFGIPDQKLENWKETLEKIV 183

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L +E+GT FYK+++ G L LP+E++  D+Y          G H YEISN
Sbjct: 184 ELNPEHISCYSLIVEEGTPFYKLYEKGKLNLPNEDIERDMYRYAIEFLENKGYHQYEISN 243

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    E +HNL YW   +YIG G  AHS +K   +    S   + E ++K++ +N +  
Sbjct: 244 FSKEHRECIHNLIYWDLEEYIGCGLAAHSFLKGYRY----SNVHNIEDYIKLINENKNIK 299

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
           +      ++   +EF+ MGLR  +GI+ +++     +N+     +  +    +G I   +
Sbjct: 300 INTYKNLTKDTMEEFMFMGLRKIKGINTEEFYKRFHKNIYEVYGDIIKKYINEGLIIE-K 358

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
              +  +  G+ + +S++ +  +
Sbjct: 359 HGNIFLSSIGIELSNSIMCDFIL 381


>gi|89889382|ref|ZP_01200893.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium BBFL7]
 gi|89517655|gb|EAS20311.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium BBFL7]
          Length = 377

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 114/378 (30%), Positives = 189/378 (50%), Gaps = 11/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       + + + +   E++  +      ++ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTNMKYKNDMVAALCEEIRLRKNEYEDTTVQTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++E   I  I+D + +N+ VS N EIT+EANP  +     +   ++ VNR+S+G+QS
Sbjct: 61  TPSVLELSQINQIIDTVYQNYRVSDNPEITLEANPDDITSEKLEQLNESPVNRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA EA++ I  A+  F  +S DLIY +P  T+ +W   + +A+   V
Sbjct: 121 FFEEDLKLMNRAHNAQEALSCIVQAQIYFDNISIDLIYGIPDMTVDRWRENIYKAIELGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T      + G +    + +A + +++       HG   YE SN    
Sbjct: 181 PHISSYALTVEDNTALKSFIEKGLIPKVDDELAQEHFHILLDAMQLHGYSNYEFSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW    YIGIGP AHS           +  K    +LK ++ +   + E E
Sbjct: 241 GYFSKNNTAYWTGKSYIGIGPSAHSFDGKRRGWNINNNVK----YLKSIQASELPI-EIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSRL 376
            L++  + +E++M GLR   G+S+   E   G N          +  +   +  +    L
Sbjct: 296 ELTTVDRYNEYVMTGLRTIYGVSLNKIEQEYGANFKDYLLDQASDFLKDHLL-YLDGDTL 354

Query: 377 RCTQRGMTMLDSVIANLA 394
             T++G  + D + + L 
Sbjct: 355 IVTRKGKFLSDGIASELF 372


>gi|302333259|gb|ADL23452.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 374

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLLSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKQLIVE-KNDA 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|158334462|ref|YP_001515634.1| coproporphyrinogen III oxidase [Acaryochloris marina MBIC11017]
 gi|158304703|gb|ABW26320.1| oxygen-independent coproporphyrinogen III oxidase [Acaryochloris
           marina MBIC11017]
          Length = 404

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 120/389 (30%), Positives = 192/389 (49%), Gaps = 17/389 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN-SHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRSI 71
               Y+H PFC ++C YCDF  S +  +K G+      +++     E++     +GPR +
Sbjct: 14  PTSAYIHIPFCRRRCFYCDFPISVIGDHKRGETSLAIADYVNLLCQEIEITA--SGPRPL 71

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+  Q +  IL  + + + +  ++E++IE +P +      + ++  G+ 
Sbjct: 72  KTLFFGGGTPSLLSAQQLEQILRCLEQQFGLEPDIEVSIEMDPGTFSWPLMRQFKALGIT 131

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ+  E+ L+  GR+H  ++   AI +           DLI  LP QT+ QW+  
Sbjct: 132 RVSLGVQAFSEELLQACGRSHTVADIGDAIAILHQAGITNFGLDLISGLPNQTLDQWQAS 191

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ AL+    HLS Y L IE  T+F K ++ G   LPS+ +A  +Y L  +  +A G   
Sbjct: 192 LEAALALEPTHLSTYDLVIEPTTVFGKKYQPGIQPLPSDEIAAQMYRLAVATLTAAGYDH 251

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G    HN  YWR   Y G G GA S V  G         K    W+K +  
Sbjct: 252 YEISNYARPGYTCRHNQVYWRNNPYYGFGMGATSYVH-GQRVSRPRTRKAYADWVKRLIA 310

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGF 367
                +     S      E LMMGLRL  G+S+   + LA   +    ++C    Q+QG+
Sbjct: 311 -AQGQMNDAVSSDLDILLETLMMGLRLSTGVSLSTLQDLASPQIVNTLLQCLAPYQKQGW 369

Query: 368 IERVQF--SRLRCT-QRGMTMLDSVIANL 393
           ++        +R T   G    ++++  +
Sbjct: 370 VQLPHHPEEAIRLTDPDGFLFSNTILTAI 398


>gi|78355583|ref|YP_387032.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78217988|gb|ABB37337.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 578

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 13/382 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC F+S         G + ++ + L E+       G R++ ++FFGG
Sbjct: 187 LYIHVPFCRSKCGYCAFHSVPVAAAGPDGMQQYLDALLREIALWGDRLGNRAVHTVFFGG 246

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV-NNFQGYRKAGVNRISLGV 137
           GTPSL+  + +A+I+D + + + + +  EI+ EANP SV          K G+NR+SLGV
Sbjct: 247 GTPSLLPEKAVAVIMDRLRRAFDIQNGAEISFEANPESVSAYGYLDTLFKCGINRLSLGV 306

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL    LR LGR H A EA+ A  LAR   F  ++ D+I+ LP Q +  W  EL+    
Sbjct: 307 QSLNNDGLRVLGRPHKAREAVNAFRLARQAGFGNINLDMIWGLPSQRLKLWLDELKAVTE 366

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DHLS Y LT+E+GT   +    G   LP E     ++        + G   YEISN 
Sbjct: 367 LKPDHLSCYGLTLEEGTPLEQACLQGRHTLPDEQEQARMFIYGAEFLESRGYMQYEISNF 426

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           + +G +  HNL YW   +Y+G+GP A S +          ++++           G    
Sbjct: 427 ARMGFQCRHNLGYWEGAEYLGMGPSAVSTLSGRRWENPHGLQEY-----ARRTAEGTLGH 481

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
           +   L+  ++A+E +M+ LR   G+ VK +  L GR+   E       L R   + R+  
Sbjct: 482 DAAALTPLERAEELIMLRLRTARGLRVKAYRDLTGRDFLREHKQLVHALHRNRLV-RISN 540

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
             LR T+ GM + ++++ N+  
Sbjct: 541 GYLRLTRNGMLVSNTILENIFA 562


>gi|298252746|ref|ZP_06976540.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis 5-1]
 gi|297533110|gb|EFH71994.1| coproporphyrinogen III oxidase-related Fe-S oxidoreductase
           [Gardnerella vaginalis 5-1]
          Length = 440

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 117/428 (27%), Positives = 194/428 (45%), Gaps = 35/428 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLT 57
           ++  +    +     S    VYVH PFC+++C YCDFN++  R       +E +    + 
Sbjct: 3   LELDAELNKSAMQTESMPFEVYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIQ 62

Query: 58  EMQWMRQLTGPRSI-----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           EM+ +++      I      S+FFGGGTP++++ Q++  IL  I   W  + + EIT EA
Sbjct: 63  EMRLVKKWQEYHGIFEPKAQSVFFGGGTPTVLKAQDLVRILQEIRNLWGFNKDAEITTEA 122

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           NP + +    +   + G  RIS G+QS     L+ L R H        +  A     R S
Sbjct: 123 NPDTADEKYIETLAEGGFTRISFGMQSAVPHVLKTLDRTHTPENVTRGVKAANACGLRSS 182

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY  P +++  W   ++ ALS  V+H+S Y LT+E  T   +    G +  P+++  
Sbjct: 183 VDLIYGAPGESLDDWRESVEMALSLGVNHISAYALTVEPRTKMGRQIAAGTIQAPNDDDE 242

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-- 290
              Y L   + ++ GL  YEISN +  G ES HNL YWR  D+ GIGPGAHS     +  
Sbjct: 243 AQKYELADELFNSAGLQWYEISNWARPGFESQHNLGYWRNIDWAGIGPGAHSHYNAANRI 302

Query: 291 -----------------HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
                            + +      HP+ W   +          E +++E    E +M+
Sbjct: 303 SKQSMDDSASLANPNEFYNLRSWDILHPKRWAHAINLGNVPWQNYECINAEDALIEEVML 362

Query: 334 GLRLREGISVKDWEML-------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           GLR++EG+++                +   +  R + ++      +  R+  T++G  + 
Sbjct: 363 GLRIKEGLNILQLCEKMRETNKVFDDSHLQKVLREVCKEDLAVLHEN-RIIATRKGRLLN 421

Query: 387 DSVIANLA 394
           D +I  + 
Sbjct: 422 DLLIERIV 429


>gi|92115423|ref|YP_575351.1| coproporphyrinogen III oxidase, anaerobic [Chromohalobacter
           salexigens DSM 3043]
 gi|91798513|gb|ABE60652.1| coproporphyrinogen III oxidase, anaerobic [Chromohalobacter
           salexigens DSM 3043]
          Length = 390

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 132/375 (35%), Positives = 196/375 (52%), Gaps = 15/375 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            L +YVH P+CV+KCPYCDFNSH       + +  ++++ L ++     L   R + SIF
Sbjct: 7   PLSLYVHVPWCVRKCPYCDFNSHGMDPDRALPETAYVEALLADLDADAALADGRELVSIF 66

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+       +L GI      +S++EIT+EANP +VE + F  YR+AG+NR+SL
Sbjct: 67  VGGGTPSLLSGDAYRHLLQGIRARLPFASDIEITLEANPGTVEHDRFAAYREAGINRLSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +   L  LGR H+  EA  A+  AR+  F  ++ DL++ LP Q       ++ RA
Sbjct: 127 GVQSFQAPQLEVLGRIHSGEEAAQAMQDARHAGFDNINLDLMHGLPGQDEALALADIDRA 186

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ A DHLS YQLT+E  T FY         LP E+   D+     +   A G   YEIS
Sbjct: 187 LALAPDHLSWYQLTLEPNTQFYSHPP----RLPDEDTLCDIQEAGHARIEAAGYQRYEIS 242

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-----KVGSHRVAISIEKHPESWLKMVR 309
            ++  G ++ HNLNYW +GDY+GIG GAH ++                 + P+++L+  +
Sbjct: 243 AYATPGRQARHNLNYWTFGDYLGIGAGAHGKLSAWQPDGSLAIERRWKVRQPQAYLRRAQ 302

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR--NLDIECERNLQRQGF 367
                +  +  L  ++   EFLM  LRL +G+  + W   +G    L          +G 
Sbjct: 303 DPRGFIAGRRALEEQELPLEFLMNALRLTQGVPRRYWHERSGLADTLLDARLEQAHAKGL 362

Query: 368 IERVQFSRLRCTQRG 382
           +      RL+ +  G
Sbjct: 363 L-CDPSQRLQASPHG 376


>gi|295394832|ref|ZP_06805047.1| coproporphyrinogen dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972428|gb|EFG48288.1| coproporphyrinogen dehydrogenase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 402

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 15/386 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTG-PR 69
             S +L  YVH P+C  +C YCDFN++          +E++     +E+    ++ G PR
Sbjct: 22  DSSRTLAAYVHVPYCRVRCGYCDFNTYTASELGKGANREDYPDQIASEIDLALRVLGEPR 81

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +++++FFGGGTP+L+    +  +L  +   + V +  E+T EANP ++ +       ++G
Sbjct: 82  ALNTVFFGGGTPTLLPASVLGGVLSQLKSVFGVVTGAEVTTEANPDTLSLEYLSELARSG 141

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S+G+QS  +  L  L R H+ +     +   ++   ++S DLIY  P +++  W+ 
Sbjct: 142 FTRVSVGMQSAVDHVLHTLDRTHDPARIPEVVQWVKDAGLQVSLDLIYGTPGESLDDWKR 201

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++ AL+   DH+S Y L +E GT      + G+L +P E+   D Y    S  +  GL+
Sbjct: 202 SVEVALACEPDHISAYSLIVEPGTKMGAQVRRGELPMPDEDDLADKYEWADSAFTTAGLN 261

Query: 250 AYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            YE+SN S  +     HN++YW   D+ G GPGAHS +      V     KHP +W   +
Sbjct: 262 WYEVSNWSRSVDTRCEHNMSYWTGDDWWGFGPGAHSHIGG----VRFWNAKHPRAWADRL 317

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
                  V +E L +  +  E +++  R+REG+++         +          R G++
Sbjct: 318 ANGQSPAVGREALDAPTREVERILLLARVREGLALDSL-----PSAAQSLIERFVRMGYL 372

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
                +    T  G  M+D ++  L 
Sbjct: 373 HE-DRTCFSPTLSGRLMVDYMVRELV 397


>gi|151221698|ref|YP_001332520.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|221139997|ref|ZP_03564490.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258450588|ref|ZP_05698650.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A5948]
 gi|262049156|ref|ZP_06022033.1| coproporphyrinogen III oxidase [Staphylococcus aureus D30]
 gi|262051243|ref|ZP_06023467.1| coproporphyrinogen III oxidase [Staphylococcus aureus 930918-3]
 gi|284024642|ref|ZP_06379040.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           132]
 gi|304380828|ref|ZP_07363488.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|150374498|dbj|BAF67758.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|257861746|gb|EEV84545.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A5948]
 gi|259160880|gb|EEW45900.1| coproporphyrinogen III oxidase [Staphylococcus aureus 930918-3]
 gi|259162825|gb|EEW47390.1| coproporphyrinogen III oxidase [Staphylococcus aureus D30]
 gi|302751413|gb|ADL65590.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340555|gb|EFM06489.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315198721|gb|EFU29049.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320144069|gb|EFW35838.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 374

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|189461462|ref|ZP_03010247.1| hypothetical protein BACCOP_02118 [Bacteroides coprocola DSM 17136]
 gi|189431796|gb|EDV00781.1| hypothetical protein BACCOP_02118 [Bacteroides coprocola DSM 17136]
          Length = 384

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 115/379 (30%), Positives = 194/379 (51%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S  +  K  + ++I +   E++  +       I +I+ GGG
Sbjct: 11  GIYLHIPFCKRRCIYCDFYSTTQNEK--KSSYINALCRELEERKNYLEGEKIETIYLGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++  LI   + + + +  N EITIEANP  +  +     R+   NR+S+G+Q+
Sbjct: 69  TPSQLEYKDFELIFQTLGRLYDIQPNAEITIEANPDDLTSSYVSMLREFPFNRLSMGIQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E  LR L R H A +AI A    R   F  +S DL+Y LP ++M  WE +L +A+   
Sbjct: 129 FQEDILRLLHRRHTAQQAIDAFERCRKAGFKNISIDLMYGLPGESMQTWESDLNQAIRMK 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E ++V L+ L        G   YEISN   
Sbjct: 189 PEHISAYHLIYEEGTALWKLREQHRMEEADEELSVSLFTLLIHKLKEKGYQHYEISNFCL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS   V       S++++  +        G    E 
Sbjct: 249 PGMYSRHNSSYWTGKKYLGCGPSAHSYNGVSRQWNISSLDEYITNI-----NEGEPYSEI 303

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L+   + ++F++  +R   G+++   +   G  L   C R      +QG +E+ +   
Sbjct: 304 EELNLYTRYNDFVITTIRTMWGMNLDMLKKTFGSKLYDYCLRMAYPHLQQGTLEQPE-GV 362

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G+ + D +++++ 
Sbjct: 363 LKLTEKGIFISDGIMSDML 381


>gi|15609525|ref|NP_216904.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Rv]
 gi|148662221|ref|YP_001283744.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Ra]
 gi|289443910|ref|ZP_06433654.1| oxygen-independent coproporphyrinogen III oxidase [Mycobacterium
           tuberculosis T46]
 gi|289570534|ref|ZP_06450761.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T17]
 gi|289575081|ref|ZP_06455308.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis K85]
 gi|289750990|ref|ZP_06510368.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T92]
 gi|289754493|ref|ZP_06513871.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis EAS054]
 gi|289758514|ref|ZP_06517892.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T85]
 gi|289762554|ref|ZP_06521932.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis GM 1503]
 gi|298525869|ref|ZP_07013278.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis
           94_M4241A]
 gi|2493813|sp|P71756|HEMN_MYCTU RecName: Full=Probable oxygen-independent coproporphyrinogen-III
           oxidase; Short=Coprogen oxidase;
           Short=Coproporphyrinogenase
 gi|1655672|emb|CAB03737.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE HEMN
           (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|148506373|gb|ABQ74182.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis H37Ra]
 gi|289416829|gb|EFD14069.1| oxygen-independent coproporphyrinogen III oxidase [Mycobacterium
           tuberculosis T46]
 gi|289539512|gb|EFD44090.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis K85]
 gi|289544288|gb|EFD47936.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T17]
 gi|289691577|gb|EFD59006.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T92]
 gi|289695080|gb|EFD62509.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis EAS054]
 gi|289710060|gb|EFD74076.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis GM 1503]
 gi|289714078|gb|EFD78090.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis T85]
 gi|298495663|gb|EFI30957.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis
           94_M4241A]
 gi|326904004|gb|EGE50937.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis W-148]
          Length = 375

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 117/387 (30%), Positives = 188/387 (48%), Gaps = 16/387 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 118 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 178 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 237

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 238 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEI 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +      V   E L ++    E +++ +RLR+G+ +           + E    +   G 
Sbjct: 294 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLARLGA-----AERERAEAVLADGL 348

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     RL  T RG  + D+V+  L 
Sbjct: 349 LD-YHGDRLVLTGRGRLLADAVVRTLL 374


>gi|294848614|ref|ZP_06789360.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9754]
 gi|294824640|gb|EFG41063.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus A9754]
          Length = 385

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNTGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|270158978|ref|ZP_06187634.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Legionella longbeachae D-4968]
 gi|269987317|gb|EEZ93572.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Legionella longbeachae D-4968]
          Length = 385

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 203/377 (53%), Gaps = 11/377 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + ++++IQ+ + +++   +    R I SIF G
Sbjct: 14  PLSLYIHIPWCIRKCPYCDFNSHKSPDILPEQSYIQALIADLKADLERFEIREIGSIFIG 73

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q    +   +     +S ++EIT+EANP +VE   F  YR+ G+NR+SLG+
Sbjct: 74  GGTPSLLSAQAYETLFTELQCILPLSQDIEITMEANPGTVEQQRFTDYRQLGINRLSLGI 133

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     LR LGR H+  +A  AI  ARN  F  ++ D+++ LP+Q++ Q   +L+ AL+
Sbjct: 134 QSFNHDHLRALGRIHDGQQAHRAIESARNAGFTNLNLDIMHGLPQQSIIQGMEDLRSALA 193

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +HLS YQLT+E  TLFYK        LPSE+ +  L     S+    G   YEIS  
Sbjct: 194 HQPEHLSWYQLTLEPNTLFYKK----KPALPSEDESCLLEEEGLSLLKTSGFERYEISAF 249

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S HNLNYW +GDY+GIG GAH ++   +  +     + P+ +L         + 
Sbjct: 250 AQPNHRSRHNLNYWLFGDYLGIGAGAHGKITTKNGIIRTRKHRQPKEYLDT---QKPFLA 306

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
             E ++++    EF++   RL + I ++ +    G      +   R  +++  I   + +
Sbjct: 307 HMETVNTKDLLFEFMLNTTRLEQIIPLELFTQTTGLELKELLPKLRMAEKKNLITLAE-T 365

Query: 375 RLRCTQRGMTMLDSVIA 391
             + T  G    + + A
Sbjct: 366 YWQVTPLGRRYTNDLQA 382


>gi|260187392|ref|ZP_05764866.1| coproporphyrinogen III oxidase [Mycobacterium tuberculosis CPHL_A]
          Length = 390

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 114/387 (29%), Positives = 185/387 (47%), Gaps = 13/387 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           +        GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 13  LAPMPGQPFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 72

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 73  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 132

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 133 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 192

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 193 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 252

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 253 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEI 308

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +      V   E L ++    E +++ +RLR+G+             + E    +   G 
Sbjct: 309 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPFARLGA-----AERERAEAVLADGL 363

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     RL  T RG  + D+V+  L 
Sbjct: 364 LD-YHGDRLVLTGRGRLLADAVVRTLL 389


>gi|166364894|ref|YP_001657167.1| coproporphyrinogen III oxidase [Microcystis aeruginosa NIES-843]
 gi|166087267|dbj|BAG01975.1| coproporphyrinogen III oxidase, anaerobic [Microcystis aeruginosa
           NIES-843]
          Length = 390

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 119/386 (30%), Positives = 190/386 (49%), Gaps = 19/386 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV------GQENFIQSFLTEMQWMRQLTGPRSISS 73
            VY+H PFC ++C YCDF   V   +           +++    E+         + + +
Sbjct: 9   SVYIHIPFCRRRCFYCDFPIFVLGNRTNPATFPPVVEYVEILQEEISL--SQGTGKPLET 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+  + +  ILD +AK +  ++++EI++E +P++  +   QGY  AGVNR+
Sbjct: 67  IFFGGGTPSLLPVELLGSILDTLAKKFDFAADIEISMEIDPATFSLEQLQGYLSAGVNRV 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +E  L+  GR+H   +   A+ L + +     S DLI  LP+QT+T WE  L+
Sbjct: 127 SLGVQAFQEPLLQVSGRSHTVKDIYQAVELIQGLGIVNYSLDLISGLPQQTLTDWENSLE 186

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS Y L +E  T F K ++ G   LP +     +Y L     +  G   YE
Sbjct: 187 KAIKLQPAHLSCYDLVLEAVTPFGKQYQPGKKPLPDDETTAKMYVLAGEKLALAGYQHYE 246

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y G G GA S +    H+   +  +    +   V++  
Sbjct: 247 ISNYAKPGYQCRHNRVYWENRPYYGFGMGAASYL----HQQRFTRPRKSRDYFAWVKEGC 302

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIE 369
              ++ E  S      E LM+GLRL EG+S+   E   G  +       L+   ++  + 
Sbjct: 303 Q--IDVEKNSLIDDLLETLMLGLRLAEGVSLPAIEANFGSEIKKAILEVLEPHKQRNLVI 360

Query: 370 RVQFSRLRCT-QRGMTMLDSVIANLA 394
               SR+R +   G    + V+ +L 
Sbjct: 361 IEGDSRVRLSDPEGFLFSNLVLTDLF 386


>gi|283783315|ref|YP_003374069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gardnerella vaginalis 409-05]
 gi|283441340|gb|ADB13806.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gardnerella vaginalis 409-05]
          Length = 436

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 117/413 (28%), Positives = 190/413 (46%), Gaps = 35/413 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSI- 71
           S    VYVH PFC+++C YCDFN++  R       +E +    + EM+ +++      I 
Sbjct: 14  SMPFEVYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIQEMRLVKKWQEYHGIF 73

Query: 72  ----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                S+FFGGGTP++++ Q++  IL  I   W  + + EIT EANP + +    +   +
Sbjct: 74  EPKAQSVFFGGGTPTVLKAQDLVRILQEIRNLWGFNKDAEITTEANPDTADEKYIETLAE 133

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
            G  RIS G+QS     L+ L R H        +  A     R S DLIY  P +++  W
Sbjct: 134 GGFTRISFGMQSAVPHVLKTLDRTHTPENVTRGVKAANACGLRSSVDLIYGAPGESLDDW 193

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              ++ ALS  V+H+S Y LT+E  T   +    G +  P+++     Y L   + ++ G
Sbjct: 194 RESVEMALSLGVNHISAYALTVEPRTKMGRQIAAGTIQAPNDDDEAQKYELADELFNSAG 253

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS----------------- 290
           L  YEISN +  G ES HNL YWR  D+ GIGPGAHS     +                 
Sbjct: 254 LQWYEISNWARPGFESQHNLGYWRNIDWAGIGPGAHSHYNAANRISKQSMDDSASLANPN 313

Query: 291 --HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
             + +      HP+ W   +          E +++E    E +M+GLR++EG+++     
Sbjct: 314 EFYNLRSWDILHPKRWAHAINLGNVPWQNYECINAEDALIEEVMLGLRIKEGLNILQLCE 373

Query: 349 L-------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                      +   +  R + ++      +  R+  T++G  + D +I  + 
Sbjct: 374 KMRETNKVFDDSHLQKVLREVCKEDLAVLHEN-RIIATRKGRLLNDLLIERIV 425


>gi|303246587|ref|ZP_07332865.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           fructosovorans JJ]
 gi|302491927|gb|EFL51805.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           fructosovorans JJ]
          Length = 375

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 129/378 (34%), Positives = 189/378 (50%), Gaps = 12/378 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S         E ++ + L E++   +      + +I+FGGGT
Sbjct: 3   LYIHVPFCRGKCRYCSFVSRPF-DMGQVEAYVATLLLEIRHWGRKLSRPKLETIYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNNFQGYRKAGVNRISLGVQS 139
           PSL+ P  +A I+  + + + +   VE T EANP S V+    +   K GVNR+SLGVQS
Sbjct: 62  PSLLPPWALARIMPELRRQFDLDDVVEWTFEANPDSAVDGPYLKSLLKYGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L +  LRFLGR H+A +AIAA  LAR   F  +S D I+ LP Q    W  +L+ A+   
Sbjct: 122 LSDADLRFLGRPHDAGQAIAAYGLARQVGFKNISLDFIWGLPGQREAVWLEQLRTAVKLR 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y LT+E GT   +    GD+ LP EN    +Y          G   YEISN + 
Sbjct: 182 PEHLSCYGLTVEAGTPLAEDVAAGDVTLPGENEQGRMYVHGAEFLEEAGYLQYEISNFAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G  S HN  YW   DY+G+GP A S ++   H            W  +VR         
Sbjct: 242 MGFVSRHNSGYWEGKDYLGLGPAAVSTLEGVRHEN----PSDLREWGGLVRAGKCG-QGG 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFSR 375
             L+  ++  E +M+ LR  +G+ +  +    GR+   + E     L++ G I R+    
Sbjct: 297 AALTEAEKTREMVMLSLRTAKGLRLAAYRKATGRDFLKDNEGLVTALRQNGLI-RISAGH 355

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T+ G  + + ++  L
Sbjct: 356 LRLTKNGFLVSNVILERL 373


>gi|310659100|ref|YP_003936821.1| coproporphyrinogen III oxidase [Clostridium sticklandii DSM 519]
 gi|308825878|emb|CBH21916.1| coproporphyrinogen III oxidase [Clostridium sticklandii]
          Length = 386

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 13/391 (3%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       L +Y H PFC+ KC YCDF S         E +I + L E+   +       
Sbjct: 1   MNYPEKEKLSLYFHIPFCLSKCSYCDFVSFA-NSTAFHEPYINALLKELLLYKSTIDKNQ 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRK 127
           IS+IF GGGTP+ +      L++  I +   +   S+N+E TIEANP ++        ++
Sbjct: 60  ISTIFIGGGTPTSLSDNLFELLIKSIDEILQLNCNSNNIEYTIEANPKTITSKKADTMKQ 119

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
            G+NR+SLG+QS  E  L+ L R H+  +   +I + +      ++ DL+YA+  QT+  
Sbjct: 120 YGINRVSLGLQSANEIELKVLNRIHSFKDLEESIDILKAHGISNINIDLMYAIANQTIES 179

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  +Q+ L+   DH+S Y L +E+GT  YK+HK+  +  P+E+  +++Y L  ++ ++ 
Sbjct: 180 FKTSIQKVLALKPDHISCYSLILEEGTALYKLHKENKITFPTEDEDINMYELAVNMLTSA 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN +  G +  HN+ YW+   Y+G G  +HS      +    SI    E ++ 
Sbjct: 240 GYEHYEISNFALSGRKCSHNITYWKVKPYLGFGVSSHSFFDNSRYSNTSSI----EEYID 295

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-- 364
           ++ KN   +   E +      +E++ + LR++EGI+ +D       N     +  L +  
Sbjct: 296 LLSKNSLPIESTELIDDTMAFEEWIFLRLRMKEGINFEDINSRFSINFLASYKPKLDKLL 355

Query: 365 -QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +G +     S++  T +G  + +     L 
Sbjct: 356 NEGLL-IYDASKVSLTLKGFELSNYAFLTLL 385


>gi|156743246|ref|YP_001433375.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus castenholzii DSM 13941]
 gi|156234574|gb|ABU59357.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseiflexus castenholzii DSM 13941]
          Length = 423

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 125/404 (30%), Positives = 186/404 (46%), Gaps = 38/404 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS------- 72
            +Y+H PFC ++C YCDFN++    +   E ++ +   E++ +      R+IS       
Sbjct: 29  HLYIHIPFCHRRCAYCDFNTYA-NMEDRMEAYVATLCAELRSLAH--PQRTISPALPLTA 85

Query: 73  ---------SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNF 122
                    +IF GGGTPS++    +   L        +    E+T+E NP +V   +  
Sbjct: 86  DLTRAMLRPTIFLGGGTPSMLPEALMERTLAAADGVIPLRE-AEVTVECNPGTVLRRDYL 144

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  R  GVNRISLGVQSL + +LR LGR H A+EA A+ + AR   F  ++ D I+ LP 
Sbjct: 145 RALRAMGVNRISLGVQSLHDPTLRVLGRIHTAAEAYASFNDARAAGFKSINLDFIFGLPG 204

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+ QWE  L+  +S+  DH +LY L +E+ T  Y     G + +P ++    +Y L   
Sbjct: 205 QTIAQWEETLREIVSWGADHFALYSLILEERTPLYAQVSSGRVCVPDDDATGAMYELATE 264

Query: 242 ITSAHGLHAYEISNHSF--------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
             +  G   YEISN +               HNL YW   DY+  G GAH  +    +  
Sbjct: 265 HFAVAGYVQYEISNWARSDDPAAPVPSHACHHNLAYWLNADYLAAGAGAHGHLYPHRYVD 324

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I    + ++  VR     V E   L+    A E + MGLRL  G+S   +    G  
Sbjct: 325 VAGI----DDYITRVRAGNLPVAEVIDLTPRDLAAETIFMGLRLNAGVSFAHFRDRCGVE 380

Query: 354 LDIECERN---LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +D         L  QG IER +   +R T RG  + + V     
Sbjct: 381 MDAIFGAELGDLAEQGLIERTERG-VRLTDRGRMLGNRVFERFV 423


>gi|317495800|ref|ZP_07954163.1| HemN protein [Gemella moribillum M424]
 gi|316913977|gb|EFV35460.1| HemN protein [Gemella moribillum M424]
          Length = 377

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 200/380 (52%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           GVY+H PFC   C YCDFN    + +   + +I   + E+     +   ++I +I+ GGG
Sbjct: 7   GVYIHIPFCKYICSYCDFNKFYIQRQ-PVDKYIDCLIDEIN---SMDKVQNIETIYIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +L  + K        E T EANP  +  +     ++ GV+RIS+GVQ+
Sbjct: 63  TPSALNDEQLHRLLSALRKKIP-QQLREFTFEANPEDLVDSRVALVKEYGVDRISMGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ LGR H A +   AI   +    + ++ DL+++LPKQTM    + +Q+ + Y 
Sbjct: 122 FNDELLKILGRGHVAGDVDMAITNCKKYGIKDINVDLMFSLPKQTMEDLFVSMQKVVEYD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E+ T  Y   +D  + LPS      +Y+   +  +A+G + YEISN + 
Sbjct: 182 ISHVSCYSLILEQKTKLYNQVRDKKVTLPSNETEEKMYDEVINFLTANGYNQYEISNFAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES+HN +YW   +Y G+G GAH  +    +    +     + ++  + + GHA  E+
Sbjct: 242 PEHESVHNSSYWENIEYYGLGAGAHGYIDGVRYANQGA----LKFYIDSMLEKGHARREE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSR 375
             ++ +++ +E + +GLRL +G+ +  +E   G+  +   +  + +    G++E +  ++
Sbjct: 298 HTVTDKEKIEEEMFLGLRLLKGVDLNTFEEKYGKRAEKIFKEVIDKNIKIGYLE-IDDNK 356

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T++G+   + V +   +
Sbjct: 357 LRLTRKGLFYGNEVFSEFLL 376


>gi|313892565|ref|ZP_07826152.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister microaerophilus UPII 345-E]
 gi|313118962|gb|EFR42167.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister microaerophilus UPII 345-E]
          Length = 378

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 12/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + +LG+Y+H PFC  +C YC+F S   +     + F+++   E++        +   +I+
Sbjct: 2   TENLGLYLHIPFCKSRCSYCNFYSIGMKAD---DKFVKALEKEIELKSCNYKNKICDTIY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +    +  I+  + +++ +S N EIT+E NP  +        RK G+NRIS+
Sbjct: 59  FGGGTPSTLSSIQVESIMKKLFRHFNISKNAEITMELNPCDMTKEYLASIRKIGINRISV 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+  +  L  +GR H A +A  AI+ A+   F  +S DL+Y LP QT   ++  L  A
Sbjct: 119 GIQTNYDSLLLKIGRLHTAKQAEKAIYQAKKEGFSNISIDLMYELPMQTSKDFKNTLLWA 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+S+Y L IE+GT F +++K G L  PSE  + ++Y     I   +G   YEIS
Sbjct: 179 VHLPIRHMSIYSLIIEEGTRFSQLYKKGLLNRPSEEASWEMYQSMCRILPHYGFERYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           + +  G +S HN+ YW+  DY+G+GP A SR+K         +      + K +    + 
Sbjct: 239 SFAQKGYKSEHNMKYWKLDDYLGLGPAACSRIKHERRENLPGV----RLYQKQLLSGENP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERV 371
             +   LS E++ +EF  + LR++EGI+ + +     +++    E     L+ +  ++  
Sbjct: 295 PEKIYKLSVEEEMEEFCFLQLRMKEGINKEKFVKRYNKDIKEIYEDKIEMLKNKKLLKES 354

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +  T++G    + V     +
Sbjct: 355 EN-HIFLTEKGFAFGNYVFEQFLL 377


>gi|320140532|gb|EFW32386.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus aureus subsp. aureus MRSA131]
          Length = 374

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGERYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|291524727|emb|CBK90314.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium rectale DSM 17629]
          Length = 397

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 117/397 (29%), Positives = 204/397 (51%), Gaps = 22/397 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +L +Y+H PFCV+KC YCDF S           +++  + EM +   L     +SS++ 
Sbjct: 2   KNLEIYIHIPFCVRKCEYCDFLSFPADDDAKL-RYVKGLMAEMIFYGPLMKNYQVSSVYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+ Q IA +++G+   + V  + EI+IE NP ++       YR AG+NR+S+G
Sbjct: 61  GGGTPSSIDEQWIAALMEGVFDCFNVLPDAEISIECNPGTLSREKLLAYRDAGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ LGR H   + +    +ARN  F  ++ DL+Y LP Q+ +Q    + + +
Sbjct: 121 LQSANNDELKLLGRIHTFEQFVTNYEVARNVGFKNINVDLMYGLPGQSASQHMATVNKII 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL---------VLPSENVAVDLYNLTQSITSAH 246
               DH+S Y L +EKGT FY+ +K   +          LP+E+   D+    Q      
Sbjct: 181 RLHPDHISAYSLIVEKGTPFYEKYKFDMVRQEAGMRTEFLPNEDELYDMEKAGQKAFMDA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE SN++  G E  HN+ YW   DY+G+G GA S +    +     ++++     +
Sbjct: 241 GYRQYETSNYAKRGMECRHNIGYWTRADYLGLGIGAASLISNVRYTNTSDMDEYLSR-CR 299

Query: 307 MVRKNGHAVVE------KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---E 357
            +   G  + +       + +  + Q +EF+ +GLR+ +G++ +D+E   G ++D    +
Sbjct: 300 HIHDVGDDIFKANLHVAADVIDKKGQMEEFMFLGLRMNDGVTREDFERAFGISIDAIYKD 359

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +L++Q  +  V+   +  ++RG  + + V+A   
Sbjct: 360 TIDSLKKQELLV-VKAGHIYLSERGKDVANYVMAQFL 395


>gi|238923984|ref|YP_002937500.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           rectale ATCC 33656]
 gi|238875659|gb|ACR75366.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           rectale ATCC 33656]
          Length = 397

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 117/397 (29%), Positives = 204/397 (51%), Gaps = 22/397 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +L +Y+H PFCV+KC YCDF S           +++  + EM +   L     +SS++ 
Sbjct: 2   KNLEIYIHIPFCVRKCEYCDFLSFPADDDAKL-RYVKGLMAEMIFYGPLMKNYQVSSVYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+ Q IA +++G+   + V  + EI+IE NP ++       YR AG+NR+S+G
Sbjct: 61  GGGTPSSIDEQWIAALMEGVFDCFNVLPDAEISIECNPGTLSREKLLAYRDAGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ LGR H   + +    +ARN  F  ++ DL+Y LP Q+ +Q+   + + +
Sbjct: 121 LQSANNDELKLLGRIHTFEQFVTNYEVARNVGFKNINVDLMYGLPGQSASQYMATVNKII 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL---------VLPSENVAVDLYNLTQSITSAH 246
               DH+S Y L +EKGT FY+ +K   +          LP+E+   D+    Q      
Sbjct: 181 RLHPDHISAYSLIVEKGTPFYEKYKFDMVRQEAGMRTEFLPNEDELYDMEKAGQKAFMDA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YE SN++  G E  HN+ YW   DY+G+G GA S +    +     ++++     +
Sbjct: 241 GYRQYETSNYAKRGMECRHNIGYWTRADYLGLGIGAASLISNVRYTNTSDMDEYLSR-CR 299

Query: 307 MVRKNGHAVVE------KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---E 357
            +   G  + +       + +  + Q +EF+ +GLR+ EG++ + +E   G ++D    +
Sbjct: 300 HIHDVGDDIFKANLHVSADVIDKKGQMEEFMFLGLRMNEGVTREAFERAFGISIDAIYKD 359

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +L++Q  +  V+   +  ++RG  + + V+A   
Sbjct: 360 TIDSLKKQELLV-VKAGHIYLSERGKDVANYVMAQFL 395


>gi|87160452|ref|YP_494238.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87126426|gb|ABD20940.1| oxygen-independent coproporphyrinogen III oxidase [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
          Length = 374

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 190/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNTGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|319953520|ref|YP_004164787.1| oxygen-independent coproporphyrinogen iii oxidase [Cellulophaga
           algicola DSM 14237]
 gi|319422180|gb|ADV49289.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           algicola DSM 14237]
          Length = 378

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 197/379 (51%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +E  + +   E+   +       +++I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMGKKEAMLSAIKRELVLRKSEFKNEVVATIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  I++ +  N++V    EIT+EANP  +  +  +   K+ +NR+S+GVQS
Sbjct: 61  TPSVLSTEEIQGIINSVYANYSVVEGPEITLEANPDDLSEDKIRVLSKSPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HN+ EA  ++ +A + F  +S DLIY LP  +  +WE  +  ALS+ V
Sbjct: 121 FFEEDLKMMNRAHNSKEAKKSLEIATHYFSNISIDLIYGLPGMSNQRWEENIALALSFGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T      K G +    + VA   +N+      A+GL AYE SN    
Sbjct: 181 PHISSYALTVEPKTALANFIKKGIIKPVDDEVASAHFNILLREMEANGLDAYETSNFGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S +N  YW    YIG+GP AHS   +       +  K    ++  +  +    +E E
Sbjct: 241 GFYSENNTAYWLGKKYIGVGPSAHSYDGIRRGWNINNNAK----YINALANDQLP-MEVE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISV----KDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
            LS   + +E++M GLR   G+S+     D+     + L  + E++++++  +  V+   
Sbjct: 296 VLSETDRYNEYVMTGLRTIWGVSLTRIYSDFGANFHKYLLQQAEKHIKQELLV--VENDT 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T++G  + D + ++L 
Sbjct: 354 LITTKKGKFLADGIASDLF 372


>gi|315658141|ref|ZP_07911013.1| coproporphyrinogen oxidase [Staphylococcus lugdunensis M23590]
 gi|315496470|gb|EFU84793.1| coproporphyrinogen oxidase [Staphylococcus lugdunensis M23590]
          Length = 373

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 197/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   ++++ + + EM          +I +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-AKQPVDDYLDALIKEMHTRL----NPNIETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I K +T+S   E T EANP  +     +  +  GVNRIS+GVQ+
Sbjct: 60  TPTALNIKQLEKLLKAINKLFTISG--EYTFEANPDELTFQKVKLLKDYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   A+  A  +    +S DL+Y LP+QT+  ++  ++RALS  
Sbjct: 118 FKPELLTILGRTHNTQDIYQAVDYANKVDISSISLDLMYHLPQQTLDDFKDSIERALSMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E  T FY +++ G L LP+E++  D+Y       +      YEISN + 
Sbjct: 178 INHISSYGLILEPKTQFYNLYRKGKLKLPNEDLGADMYQYLMHRLNHSKFQQYEISNFAE 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN+ YW+  +Y G G GA   V    +     +      ++K V+ +   ++  
Sbjct: 238 KGHASTHNMTYWKNEEYYGFGAGASGYVNGKRYTNVNPVN----HYIKAVQADKPPILSF 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              + ++Q +E + +GLR+ +G+++  ++    +++     +   +L ++  I++   + 
Sbjct: 294 TIPTIKEQMEEEMFLGLRMNKGVNIIRFKQKFDQSIYQVFGQTIHDLSQKELIKQ-NSNY 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L  T+RG  + + V     +
Sbjct: 353 LALTERGKVIGNEVFEAFLL 372


>gi|308235153|ref|ZP_07665890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gardnerella vaginalis ATCC 14018]
          Length = 439

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 122/428 (28%), Positives = 197/428 (46%), Gaps = 35/428 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLT 57
           ++  +    +     S    VYVH PFC+++C YCDFN++  R       +E +    + 
Sbjct: 3   LELDAELNKSAMQTKSMPFEVYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIL 62

Query: 58  EMQWMRQLTGPRSI-----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           EM+ +++      I      S+FFGGGTP++++ Q++  IL  I   W +    EIT EA
Sbjct: 63  EMRLVKKWQEFHGIFEPKAQSVFFGGGTPTVLKAQDLVRILQEIRNLWGIMPGAEITTEA 122

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           NP + + +  +   + G  RIS G+QS     L+ L R H        +  A     R S
Sbjct: 123 NPDTADESYIETLAEGGFTRISFGMQSAVPHVLKTLDRTHTPENVERGVKTADACGLRSS 182

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY  P +++  W   ++ ALS  V+H+S Y LT+E  T   +    G +  P ++  
Sbjct: 183 VDLIYGAPGESLDDWRKSVEMALSLGVNHVSAYALTVEPRTKMGRQIAAGTIHAPDDDDE 242

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-- 290
              Y +   + ++ GL  YEISN +  G ES HNL YW+  D+ GIGPGAHS     S  
Sbjct: 243 AAKYEVADELFNSAGLEWYEISNWARTGFESQHNLGYWKNIDWAGIGPGAHSHYNSVSGI 302

Query: 291 -----------------HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
                            + +      HP+ W   +          E ++SE    E +M+
Sbjct: 303 SKQSMDDCALLADSSKFYNLRSWDILHPKRWAHAINAGNVPWQNYECINSEDALIEEVML 362

Query: 334 GLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS-------RLRCTQRGMTML 386
           GLR+REG+S+ +      R  + E + +  ++  IE  +         R+  T++G  + 
Sbjct: 363 GLRIREGLSIDELCTKM-RKANCEFDDSYLQKVLIEVCKEDLAVLNKNRIAATRKGRLLN 421

Query: 387 DSVIANLA 394
           D +I  + 
Sbjct: 422 DLLIEKIV 429


>gi|329847437|ref|ZP_08262465.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
 gi|328842500|gb|EGF92069.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
          Length = 378

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 143/366 (39%), Positives = 226/366 (61%), Gaps = 7/366 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +YVHWP+C + CPYCDFN    R +  Q +   S L++++    L GPR++ S+FFGG
Sbjct: 7   IALYVHWPYCSRICPYCDFNVTRDRGQASQRSLFDSILSDLKSQSALLGPRTLVSLFFGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P   A ++    + +  + ++EIT+EANP+  E+  ++ +R AG+NR+SLGVQ
Sbjct: 67  GTPSLLPPDWTAELIATAKQLFPSTDDIEITLEANPTDAEIARYRAFRDAGINRLSLGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL++++L+FLGRNH+A EAI  I  A+++F R+S DLIYA P+QT   W  EL RA + +
Sbjct: 127 SLDDEALKFLGRNHSAREAITGIETAQSVFGRVSLDLIYARPEQTTHDWREELTRAAALS 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S YQLTIE+ T F +  + G    P +++A   Y  TQ         AYE+SNH+ 
Sbjct: 187 IEHISPYQLTIEQTTAFGRAVRRGRWSPPDQDLAEAFYFETQDTLERLNFDAYEVSNHAR 246

Query: 259 -LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            + A+++HN++ WR  DYIG+GPGAH R+ +   R A +     +++   V   G    E
Sbjct: 247 GINAQAMHNVHIWRGVDYIGVGPGAHGRLTIDGQRHATTALSELKAYTARVADIGVG-HE 305

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E L+  +  +E  M+GLR+ EG+++  +++L   +L ++    L   GF+E    + LR
Sbjct: 306 SETLTPLEAEEEAAMLGLRMAEGVALSRFKLL---DLPVKA-APLIDGGFMELT-PTHLR 360

Query: 378 CTQRGM 383
            T +G 
Sbjct: 361 ATPKGR 366


>gi|172041017|ref|YP_001800731.1| coproporphyrinogen III oxidase [Corynebacterium urealyticum DSM
           7109]
 gi|171852321|emb|CAQ05297.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           urealyticum DSM 7109]
          Length = 421

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 125/421 (29%), Positives = 194/421 (46%), Gaps = 51/421 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------------ENFIQSFLTEMQWMRQLTG 67
           G+Y+H PFC  +C YCDFN++                      ++ +   E++       
Sbjct: 4   GLYIHVPFCASRCGYCDFNTYTPAELAADPASMGSAQGRTPAGYLDALEVELELAAAAWD 63

Query: 68  PRS---------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
            R          +S++FFGGGTPS++  + +   L+ + +   ++ + E+T EANP S  
Sbjct: 64  RRGLYEGESDPGVSTVFFGGGTPSMLGAEGLVRALNAVRRTVGLAPDAEVTTEANPESTS 123

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
              F   R+AG NRISLG+QS     L+ L R H       A+  A+   F  ++ DLIY
Sbjct: 124 PEFFTRLREAGFNRISLGMQSAAGHVLKLLERQHTPGRPEQAVAEAKAAGFEHVNLDLIY 183

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +        L   +   VDH+S Y L +E GT   +  + G+L  P E+V  D Y 
Sbjct: 184 GTPTERDEDLARSLDAVIEADVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVYADRYR 243

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-------- 289
           +        G   YE+SN +  G E  HNL YWR G + G GPGAH  V++         
Sbjct: 244 MIDERLVEAGFQWYEVSNWAKPGGECEHNLIYWRDGQWWGAGPGAHGCVRLREDAAAQYL 303

Query: 290 -------------SHRVAISIEKHPESWLKMV-RKNGHAVVEKEFLSSEQQADEFLMMGL 335
                        S    +   K+P  + + + +++    V  E LS      E LM+GL
Sbjct: 304 PVEAAERTGAEDFSGITRLVNAKYPARYWEALMQRHDLPAVTFEPLSQADLTTEHLMLGL 363

Query: 336 RLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSVIANLA 394
           RLREG+++     LAG   +IE  ++L   G +E      RLR T++G  ++D ++ +L 
Sbjct: 364 RLREGVALAG---LAGTEAEIERYQHL---GLLEVDARAQRLRVTEQGRYLVDGIVTDLL 417

Query: 395 V 395
           +
Sbjct: 418 L 418


>gi|31793565|ref|NP_856058.1| coproporphyrinogen III oxidase [Mycobacterium bovis AF2122/97]
 gi|121638267|ref|YP_978491.1| coproporphyrinogen III oxidase [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224990761|ref|YP_002645448.1| coproporphyrinogen III oxidase [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|31619158|emb|CAD97270.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE HEMN
           (COPROPORPHYRINOGENASE) (COPROGEN OXIDASE)
           [Mycobacterium bovis AF2122/97]
 gi|121493915|emb|CAL72390.1| Probable oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224773874|dbj|BAH26680.1| coproporphyrinogen III oxidase [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 375

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 116/387 (29%), Positives = 187/387 (48%), Gaps = 16/387 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 118 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +   +   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 178 VRSVDATVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 237

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 238 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEI 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +      V   E L ++    E +++ +RLR+G+ +           + E    +   G 
Sbjct: 294 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPLARLGA-----AERERAEAVLADGL 348

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     RL  T RG  + D+V+  L 
Sbjct: 349 LD-YHGDRLVLTGRGRLLADAVVRTLL 374


>gi|88705473|ref|ZP_01103184.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
 gi|88700563|gb|EAQ97671.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
          Length = 394

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 195/383 (50%), Gaps = 15/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  LG+YVH P+C +KCPYCDFNSH     + +  +I + + ++Q        R I ++F
Sbjct: 3   APQLGLYVHLPWCERKCPYCDFNSHEASV-IPEAAYIDTLILDLQAEIN-DQRREIDTMF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL     I  +++ + K+  ++   E+T+EANP SVE    +GY +AGV R SL
Sbjct: 61  IGGGTPSLFSVDAIGRLMEAV-KSAGLAKGAEVTMEANPGSVEAGRLKGYAEAGVTRFSL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           G+QS    +L+ LGR H+   A  A   A+       + DL++ LP QT+ +   +++ A
Sbjct: 120 GIQSFSNGALQALGRIHDGEMARRAAAAAQGSGAASYNIDLMHGLPAQTLGEGLNDIRTA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ +  HLS YQLTIE  T FY         LP +++   L      +  + G H YE+S
Sbjct: 180 LALSPPHLSWYQLTIEPNTRFYSQPPR----LPEDSILGSLEEEGCRVLQSAGYHRYEVS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGH 313
             +  G E  HNLNYWR+GDY+ IG GAH ++      V   +  + P+ +L      G 
Sbjct: 236 AWARPGEECQHNLNYWRFGDYLAIGAGAHGKLSTAQGEVFRYAKTRQPDDYLAA---GGR 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERV 371
                  L S  +  EF++  LRL +G S+  +E   G + D        L   G + R 
Sbjct: 293 ERRNLRTLDSADRQGEFMLNALRLAKGFSLTLFEARTGLDADRVRPTIDELADLGLLTR- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              ++R T  G   LD V+A   
Sbjct: 352 DGEQVRTTDLGRRFLDDVVAAFF 374


>gi|160940360|ref|ZP_02087705.1| hypothetical protein CLOBOL_05250 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436940|gb|EDP14707.1| hypothetical protein CLOBOL_05250 [Clostridium bolteae ATCC
           BAA-613]
          Length = 425

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 122/431 (28%), Positives = 206/431 (47%), Gaps = 52/431 (12%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           MT      L +Y+H PFC +KC YCDF S  R      E + +  + E++          
Sbjct: 1   MTNLQRKPLELYIHVPFCARKCLYCDFLSF-RALASVHEAYTEQLIREIEVQGACCREYQ 59

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++F GGGTPS++EP  I  I+  + +N+ ++ + EITIE NP ++  N    YR AG+
Sbjct: 60  VKTVFIGGGTPSVMEPCLIRDIMQALNRNFDIAGDAEITIEVNPGTLLQNKLHIYRAAGI 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS + Q L+ LGR H   E + +   A    F  ++ DL+ ++P QT+  W+ 
Sbjct: 120 NRLSIGLQSADNQELKDLGRIHTFEEFLKSYQCARMAGFTNVNVDLMSSIPGQTLESWKN 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-------------------------- 223
            L++      +H+S Y L +E+GT F+  +   +                          
Sbjct: 180 TLKKVTMLKPEHISAYSLIVEEGTPFWDRYGKREGEETGLKTDDVCFLHPRGGGQTEQAP 239

Query: 224 ---------LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD 274
                      LP E+    +Y+ T++  +  G   YEISN++  G E LHN  YWR   
Sbjct: 240 LPRKRAALYPALPDEDTENRIYHFTRTFLAEQGYGRYEISNYAKPGRECLHNTGYWREVP 299

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESW--LKMVRKNGHAVVE-----KEFLSSEQQA 327
           Y+G+G GA S +         S E+  +++  L    + G + +       E L+ E Q 
Sbjct: 300 YLGLGLGASSCINGTR----FSNERDLDTYLHLDFSEEGGSSALALLRGPVEELTREAQM 355

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSRLRCTQRGMT 384
           +EF+ +GLR+ +GIS  D+  + G  ++         L   G ++R +   +  T+ GM 
Sbjct: 356 EEFMFLGLRMTKGISEIDFVSMFGVKIEGVYGPVIERLIGDGLLKR-EGVWISLTEWGMD 414

Query: 385 MLDSVIANLAV 395
           + + V++   +
Sbjct: 415 VSNFVLSEFLL 425


>gi|189501160|ref|YP_001960630.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides BS1]
 gi|189496601|gb|ACE05149.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides BS1]
          Length = 384

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 124/377 (32%), Positives = 188/377 (49%), Gaps = 7/377 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L  YVH PFC K+C YCDF    +  +  QE F  +   E           +  SI FGG
Sbjct: 3   LHCYVHIPFCRKRCGYCDFFLVTK--EDLQERFFSALYEETAERLAALRGSTFHSIHFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +   L+ + +  ++S + EITIEANP  + ++  +     GVNR+S+GVQ
Sbjct: 61  GTPSLVSVSYLERWLETVFRYVSLSDDAEITIEANPEDLTIDKLRDLASLGVNRLSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR H A +A      A N+F  +S DLI     +++ +W+ +L  A S  
Sbjct: 121 SFLPEKLLALGRCHTAPDAFRVTGEAMNLFDNVSVDLICGAEGESLGEWQRDLDCAASSG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S+Y LT EK TL ++  K G + LP E V   LY+   ++    G   YE+SN S 
Sbjct: 181 VPHVSVYMLTPEKNTLLFRRLKKGQVTLPGEAVQAALYDAACAMLGDRGFEHYEVSNFSK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +NL  W+   Y+G GP AHS +  G+  V  +       ++      G A   +
Sbjct: 241 PGFFSRYNLGCWQRESYLGFGPSAHSFLVSGTDEVRSANVSSLIRYMA---SPGKAQASR 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-ECERNLQRQGFIERVQFSRLR 377
           E LS E+Q DE + + LRL  G+ + D       + ++      L+ QG +E +  + ++
Sbjct: 298 EVLSPEEQIDEKIFLSLRLSSGLELDDLLHYHKNSSEVLAIVERLKEQGLLEILDGA-IK 356

Query: 378 CTQRGMTMLDSVIANLA 394
            +++G    D V   L 
Sbjct: 357 VSRKGFLFADKVAEELL 373


>gi|89895882|ref|YP_519369.1| hypothetical protein DSY3136 [Desulfitobacterium hafniense Y51]
 gi|89335330|dbj|BAE84925.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 381

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 116/385 (30%), Positives = 189/385 (49%), Gaps = 16/385 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-----MRQLTGPRSISSI 74
            +Y+H PFCV+KC YC F S   + +V  E ++     E++      +RQ      I ++
Sbjct: 3   SLYIHVPFCVQKCNYCAFYSEPWQ-EVKAEAYLAGLNREVELRQEIVLRQQEVQEEIETL 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP+ +    +  +L  I          E TIEANP ++     +   + G+NRIS
Sbjct: 62  FIGGGTPTALPEAELGALLSIIHGQLRFKDGGEKTIEANPGTLTAEKLRILSRQGINRIS 121

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS  +  LR +GR H   E    + L R   F  ++ DL++ LP QT   W   ++ 
Sbjct: 122 LGVQSFNDDLLRQIGRIHRTEEVREGVQLIREAGFKNLNLDLMFGLPGQTQADWRDTMEE 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL    +HLS+Y L +E+GT    ++ +    LP ++   ++Y+L + I    G   YE+
Sbjct: 182 ALRLRPEHLSVYGLMVEEGTPLA-LNSESLTNLPDDDSQAEMYHLAREILGKAGYRHYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G E  HNL YW   DY+GIGP A S +    ++    I      + KM+ +   
Sbjct: 241 SNYALPGYECQHNLGYWHRKDYLGIGPSAVSCLNNRRYQNVEDIL----LYAKMLSQGEL 296

Query: 314 AV--VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIE 369
            V   + EFLS  +Q  E L++GLRL++G+++  ++   G  L       L+R  +  + 
Sbjct: 297 PVDSQKNEFLSQHEQMAELLILGLRLKDGVNLSQFQKEVGAELFELYPAVLERYLKAGVL 356

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           +++   L        + + V+    
Sbjct: 357 KIEEGSLLLQPEYWFVANGVLQEFV 381


>gi|289448030|ref|ZP_06437774.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis CPHL_A]
 gi|289420988|gb|EFD18189.1| oxygen-independent coproporphyrinogen III oxidase hemN
           [Mycobacterium tuberculosis CPHL_A]
          Length = 375

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 117/387 (30%), Positives = 187/387 (48%), Gaps = 16/387 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   R A
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATIRAA 117

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  R+SLG+QS+  + L  L R H+   A AA   A    F  ++ DLIY  P ++    
Sbjct: 118 GYTRVSLGMQSVAPRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDL 177

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  A+   VDH+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G
Sbjct: 178 VRSVDAAVQAGVDHVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAG 237

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN    G E  HNL YW  G + G GPGAH  + V          KHP ++ ++
Sbjct: 238 FAWYEVSNWCRPGGECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEI 293

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           +      V   E L ++    E +++ +RLR+G+             + E    +   G 
Sbjct: 294 LAGATLPVAGFEQLGADALHTEDVLLKVRLRQGLPFARLGA-----AERERAEAVLADGL 348

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     RL  T RG  + D+V+  L 
Sbjct: 349 LD-YHGDRLVLTGRGRLLADAVVRTLL 374


>gi|325286717|ref|YP_004262507.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
 gi|324322171|gb|ADY29636.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
          Length = 376

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 116/379 (30%), Positives = 189/379 (49%), Gaps = 11/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +E  +Q+   E+   +      S+ +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMGKKEEMLQAISKELVLRKNEFKQTSVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    I  ++  + +N+ V  N EIT+EANP  +     +    + VNR+S+GVQS
Sbjct: 61  TPSVLNANEINRLIKKVYENYNVVKNPEITLEANPDDLSTLKIEQLAVSKVNRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E  L+ + R HNA EA + I LA   F  ++ DLIY +P  +  +W   + +ALS+ +
Sbjct: 121 FFEDDLKLMNRAHNAKEAESCIALATKYFSDITIDLIYGIPGMSNDKWMQNIHKALSFGL 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  K G++    ++VA + + +     +  G   YE SN    
Sbjct: 181 PHISSYALTVEPKTALEKFIKKGEIAPVKDSVAQEHHKILVKELAKEGFVNYEFSNFGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S +N  YW    YIG+GP AHS           +  K    ++K + +N     E E
Sbjct: 241 DFFSKNNTAYWLGKKYIGVGPSAHSFNGESRSWNVNNNPK----YIKALAQNKLP-QEIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRL 376
            LS   + +E++M GLR   G+S++  +   G       E+       +G + +++ + L
Sbjct: 296 ELSVVDRYNEYVMTGLRTIWGVSLQKVQEDFGLKYVTYLEKEANKKIEKGLL-QLKNNTL 354

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + D + A+L +
Sbjct: 355 LVTAKGKFLSDGIAADLFI 373


>gi|254515825|ref|ZP_05127885.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
 gi|219675547|gb|EED31913.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
          Length = 375

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 127/384 (33%), Positives = 195/384 (50%), Gaps = 15/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  LG+Y+H P+C +KCPYCDFNSH  R  + +  +  + + ++         R I ++F
Sbjct: 3   APQLGLYIHIPWCERKCPYCDFNSHETR-DIPESAYTDALIEDL-LQETRDRRREIQTVF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL   + I  ++D +     ++ + E+T+EANP SVE    QGY +AG+ R SL
Sbjct: 61  IGGGTPSLFSVEAITRLMDAVRS-AGLAEDAEVTMEANPGSVETARLQGYARAGITRFSL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           G+QS ++  L+ LGR H++  A  A   AR+   R  + DL++ LP+Q++ Q   +++ A
Sbjct: 120 GIQSFDDACLKSLGRIHDSDMARRATAAARSCGARSYNIDLMHGLPEQSLDQGLADIRSA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+    H+S YQLTIE  T FY         LP+E +   L      + +A G   YE+S
Sbjct: 180 LALKPPHVSWYQLTIEPNTRFYSNPPQ----LPAEAILGTLEEEGARLLTAAGYERYEVS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGH 313
             +  G    HNLNYWR+GDY+ IG GAH ++   +  +   S  + PE +L      G 
Sbjct: 236 AWAQPGQACQHNLNYWRFGDYLAIGAGAHGKLSAENGDIFRYSKTRQPEDYLAA---GGI 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
                 +L    +  EF++  LRL  G S   +E   G +          L  QG + + 
Sbjct: 293 ERRAVRWLDESDRRGEFMLNALRLSAGFSWDLFESRTGLDGRQISATVTQLVDQGLLSQ- 351

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           Q  ++  T  G   LD V+     
Sbjct: 352 QQDQISTTDLGRRFLDDVVGAFFA 375


>gi|307152437|ref|YP_003887821.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
 gi|306982665|gb|ADN14546.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
          Length = 429

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 126/414 (30%), Positives = 206/414 (49%), Gaps = 31/414 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQW 61
             + T +G      Y+H PFC ++C YCDF   V             + ++Q+   EM+ 
Sbjct: 15  ATSSTIEGDIPRSAYIHIPFCRRRCYYCDFPISVLGNNTDINTSGSIQEYVQALCQEMRV 74

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               +  + + ++FFGGGTPSL+  +++  IL  +++ + ++S+ EI++E +P +     
Sbjct: 75  TP--SRGQPLDTVFFGGGTPSLLPVKSLEQILTTLSQQFGITSSAEISLEMDPGTFTKEQ 132

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +GY +AGVNR+SLGVQS E++ L+  GR H+  +   AI   R +  P +S DLI  LP
Sbjct: 133 LKGYLEAGVNRVSLGVQSFEDELLKICGRFHSKKDIFIAIDHIRALEVPNLSLDLISGLP 192

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+ QWE  L  A+S A +HLS Y L +E  T+F K ++ G+  LP++ +   +Y   Q
Sbjct: 193 HQTLQQWETSLLSAISLAPNHLSCYDLVLEPVTVFGKKYQPGETPLPTDEITALMYRTAQ 252

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              +  G   YE+SN++  G +  HN  YW    Y G G GA S V +       + + +
Sbjct: 253 KYLTNSGFEHYEVSNYAQPGYQCRHNRVYWENRAYYGFGMGAASYVSLQRFSRPRTRKDY 312

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
                +++   G   ++     +  Q  E LM+GLRL +G+++       G  +  E  +
Sbjct: 313 YSWVTQLIESGGK--IDCPPTGAVDQLLETLMLGLRLADGVNLSQLNHQYGEKVLHEIGK 370

Query: 361 NLQ---RQGFIERV----------------QFSRLRCT-QRGMTMLDSVIANLA 394
            LQ   RQG++E +                   RLR T   G    ++V+A L 
Sbjct: 371 TLQPYFRQGWVEGITQQGNRVNFRETQDIFALERLRLTDPEGFLFSNTVLAALF 424


>gi|291528951|emb|CBK94537.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium rectale M104/1]
          Length = 397

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 203/398 (51%), Gaps = 24/398 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +L +Y+H PFCV+KC YCDF S           +++  + EM +   L     +SS++ 
Sbjct: 2   KNLEIYIHIPFCVRKCEYCDFLSFPADDDAKL-RYVKGLMAEMIFYGPLMKNYQVSSVYI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+ Q IA +++G+   + V  + EI+IE NP ++       YR AG+NR+S+G
Sbjct: 61  GGGTPSSIDEQWIAALMEGVFDCFNVLPDAEISIECNPGTLSREKLLAYRDAGINRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ LGR H   + +    +ARN  F  ++ DL+Y LP Q+ +Q+   + + +
Sbjct: 121 LQSANNDELKLLGRIHTFEQFVTNYEVARNVGFKNINVDLMYGLPGQSASQYMATVNKII 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL---------VLPSENVAVDLYNLTQSITSAH 246
               DH+S Y L +EKGT FY+ +K   +          LP+E+   D+    Q      
Sbjct: 181 RLHPDHISAYSLIVEKGTPFYEKYKFDMVRQEAGMRTEFLPNEDELYDMEKAGQKAFMDA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES--- 303
           G   YE SN++  G E  HN+ YW   DY+G+G GA S +    +     ++++      
Sbjct: 241 GYRQYETSNYAKRGMECRHNIGYWTRADYLGLGIGAASLISNVRYTNTSDMDEYLSRCRH 300

Query: 304 ----WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--- 356
                  + R N H   +   +  + Q +EF+ +GLR+ EG++ + +E   G ++D    
Sbjct: 301 IHDVGDDIFRANLHVAAD--VIDKKGQMEEFMFLGLRMNEGVTREAFERAFGISIDAIYK 358

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +   +L++Q  +  V+   +  ++RG  + + V+A   
Sbjct: 359 DTIDSLKKQELLV-VKAGHIYLSERGKDVANYVMAQFL 395


>gi|313140105|ref|ZP_07802298.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132615|gb|EFR50232.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 420

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 120/415 (28%), Positives = 184/415 (44%), Gaps = 45/415 (10%)

Query: 25  WPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSISSIFF 76
            PFC+++C YCDFN++          + N+    + EM+ +R            +S++FF
Sbjct: 1   MPFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEPPVSTVFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + GV R+S G
Sbjct: 61  GGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGVTRVSFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   ++ A+ 
Sbjct: 121 MQSAVPHVLKTLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVRTAVD 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  YEISN 
Sbjct: 181 LGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYEISNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-----------------------VGSHRV 293
           S  G ES HNL YWR  D+ G+GPGAHS                          V S  +
Sbjct: 241 SRPGYESRHNLGYWRNVDWAGLGPGAHSHYNMVMGSSTDGDAANSDAAGDVSASVTSTSM 300

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV---------- 343
                 HP  W   +          E +S  +  +E +M+GLR+REG+ +          
Sbjct: 301 RGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRHIEAV 360

Query: 344 ---KDWEMLAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSVIANLA 394
              +D      R +D  C   L   G I           T+RG  + D+VI  + 
Sbjct: 361 NRAQDAAQGTLRIIDDACLTPLVGDGLITLDPTTGHAVATRRGRLLNDAVIERMF 415


>gi|325661804|ref|ZP_08150426.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325471893|gb|EGC75109.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 404

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 120/410 (29%), Positives = 204/410 (49%), Gaps = 37/410 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +Y+H PFC+KKC YCDF S     +   + ++ + + E++  ++L     +++IF
Sbjct: 2   KRELELYIHIPFCMKKCAYCDFLSGPAPRET-IDRYVTALVAEIRQYQKLAENYRVTTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS++    +  I D +   + + ++ EIT+EANP +V   N Q YR  G+NRIS 
Sbjct: 61  FGGGTPSILSGGQMKEIFDALRDVFEIQADAEITMEANPGTVTKENLQAYRACGINRISF 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS++++ L+ LGR H   +   +  LAR   F  ++ DLI A+P QT+  WE  L   
Sbjct: 121 GLQSVDDEELKLLGRVHTMRQFEESYDLARKAGFQNINVDLISAIPGQTVESWEHTLDTV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG-------------------------DLVLPSE 229
           +    +H+S Y L IE+GT FY+++ +                             LP E
Sbjct: 181 IRMNPEHISAYSLIIEEGTPFYEIYGENAKEEQDSRCEKCLADDGKQMDTGKTFPKLPDE 240

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
                +Y LT     A G   YE+SN++  G    HN  YW+  +Y+GIG GA S ++  
Sbjct: 241 EAERRMYELTAEKLEAAGYLQYEVSNYAKPGYACRHNKGYWQRVEYLGIGTGAASLIENE 300

Query: 290 SHRVAISIEKHPES--WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            ++     + +  +   L  + +      EKE L    Q +E + +GLR++EG++ + + 
Sbjct: 301 RYQHISDTDLYIRANGKLDQIEE------EKETLDWNAQVEETMFLGLRMKEGVNKQKFR 354

Query: 348 MLAGRNLDIECERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               R +       L++  +  +   +  R+  T+RG  + + V+A   +
Sbjct: 355 ERYHREIQEVYGEVLEKLKEEGLLCEEEERICLTKRGNDLSNYVLAQFLL 404


>gi|159030192|emb|CAO91084.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 390

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 19/386 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV------GQENFIQSFLTEMQWMRQLTGPRSISS 73
            VY+H PFC ++C YCDF   V               +++    E+   ++    + + +
Sbjct: 9   SVYIHIPFCRRRCFYCDFPIFVVGNHTNPATFPPVVEYVEILQEEISLSQE--TGKPLET 66

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+  + +  ILD +AK +  ++++EI++E +P++  +   QGY  AGVNR+
Sbjct: 67  IFFGGGTPSLLPVELLGAILDTLAKKFDFAADIEISMEIDPATFSLEQLQGYLSAGVNRV 126

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +E  L+  GR+H   +   A+ L R +     S DLI  LP+QT+T WE  L+
Sbjct: 127 SLGVQAFQEPLLQVSGRSHTVKDIYQAVELIRGLGIVNYSLDLISGLPQQTLTDWENSLE 186

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+     HLS Y L +E  T F K ++ G   LP +     +Y L     +  G   YE
Sbjct: 187 KAIELQPAHLSCYDLVLEAVTPFGKQYQPGKKPLPDDETTAKMYVLASEKLALAGYQHYE 246

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y G G GA S +    H+   +  +    +   V++  
Sbjct: 247 ISNYAKPGYQCRHNRVYWENRPYYGFGMGAASYL----HQQRFTRPRKSRDYFAWVKEGC 302

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIE 369
              ++ E  S      E LM+GLRL  G+S+   E   G  +       L+   ++  + 
Sbjct: 303 Q--IDVEKNSLIDDLLETLMLGLRLGSGVSLPAIEANFGSEIKKAILEVLEPHKQRNLVI 360

Query: 370 RVQFSRLRCT-QRGMTMLDSVIANLA 394
               +R+R +   G    + V+ +L 
Sbjct: 361 IEGDTRVRLSDPEGFLFSNIVLTDLF 386


>gi|289550646|ref|YP_003471550.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent [Staphylococcus lugdunensis HKU09-01]
 gi|289180178|gb|ADC87423.1| Putative coproporphyrinogen III oxidase of BS HemN-type,
           oxygen-independent [Staphylococcus lugdunensis HKU09-01]
          Length = 373

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 196/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   ++++ + + EM          +I +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-AKQPVDDYLDALIKEMHTRL----NPNIETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I K +T+S   E T EANP  +     +  +  GVNRIS+GVQ+
Sbjct: 60  TPTALNIKQLEKLLKAINKLFTISG--EYTFEANPDELTFQKVKLLKDYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   A+  A       +S DL+Y LP+QT+  ++  ++RALS  
Sbjct: 118 FKPELLTILGRTHNTQDIYQAVDYANKADISSISLDLMYHLPQQTLDDFKDSIERALSMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E  T FY +++ G L LP+E++  D+Y       +      YEISN + 
Sbjct: 178 INHISSYGLILEPKTQFYNLYRKGKLKLPNEDLGADMYQYLMHRLNHSKFQQYEISNFAE 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN+ YW+  +Y G G GA   V    +     +      ++K V+ +   ++  
Sbjct: 238 KGHASTHNMTYWKNEEYYGFGAGASGYVNGKRYTNVNPVN----HYIKAVQADKPPMLSF 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              + ++Q +E + +GLR+ +G+++  ++    +++     +   +L ++  I++   + 
Sbjct: 294 TIPTIKEQMEEEMFLGLRMNKGVNIIRFKQKFDQSIYQVFGQTIHDLSQKELIKQ-NSNY 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L  T+RG  + + V     +
Sbjct: 353 LALTERGKVIGNEVFEAFLL 372


>gi|325109973|ref|YP_004271041.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           brasiliensis DSM 5305]
 gi|324970241|gb|ADY61019.1| oxygen-independent coproporphyrinogen III oxidase [Planctomyces
           brasiliensis DSM 5305]
          Length = 391

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 124/394 (31%), Positives = 199/394 (50%), Gaps = 12/394 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMR 63
           +A+ NN+  +      VYVH PFC  +C YCDF     R ++    ++ +   E+ +   
Sbjct: 6   TAFLNNLAAEPVR--SVYVHVPFCQHRCGYCDFAIVAGRNEL-VPRYLNALSLELTRQFS 62

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             +    + +++ GGGTP+L+    +  +L  + + + +  + E T EANP         
Sbjct: 63  SASERIELDTLYIGGGTPTLLSADELQSLLTLLQQFFVLGPDAEFTFEANPDRFTPEKQD 122

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              +AGVNRISLG+QS ++  L  L R H+A+EA       R  F  +S DLI+ALP QT
Sbjct: 123 VLSEAGVNRISLGIQSFDDNFLTLLERTHSAAEAEQVYRQTRERFENVSIDLIFALPGQT 182

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              WE  L+RA+S+   H+S Y LT EKGT F+   + G L   ++++   +Y    ++ 
Sbjct: 183 AEHWEQTLERAISWQPAHISTYALTFEKGTSFWGQREKGILAQVADDLETHMYERVMAVL 242

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A GL  YEISN +  G ES HN  YW    +   GPGA + V         S    P +
Sbjct: 243 PAAGLQPYEISNFARPGRESRHNQIYWTGKPFYAFGPGAAAFVGNRRSVNHRS----PFT 298

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W+K + ++   V   + LS+E++A E   +GLR  +G+++ D     G ++    + +LQ
Sbjct: 299 WMKRLEQDESPVDLVDDLSTEERARELFAVGLRRVQGVNLSDILARTGCDMASLLQSDLQ 358

Query: 364 R---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           R     ++E+ +    R T  G    DS+ A++ 
Sbjct: 359 RFEELNWLEKTKTGY-RLTPAGRLYADSIAADVI 391


>gi|254495253|ref|ZP_05108177.1| coproporphyrinogen III oxidase [Polaribacter sp. MED152]
 gi|85819606|gb|EAQ40763.1| coproporphyrinogen III oxidase [Polaribacter sp. MED152]
          Length = 377

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 192/379 (50%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YC+F  +       +   +     E+   ++      + +I+FGGG
Sbjct: 3   GIYIHIPFCKQACYYCNF--YFSTSLKKKTELLDCLAKEIVLRKEELNNDVVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q I  +++ + +N+ V  N EIT+EANP  +     +    + +NR+S+GVQS
Sbjct: 61  TPSILSTQEINNLIEAVYENFKVIDNPEITLEANPDDLSEEKIKELAASKINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA E+   + +A   F  +S DLIY +P  +  QW   +  ALSY V
Sbjct: 121 FFERDLKLMNRAHNAEESKKCLEIATQYFSNISVDLIYGIPDCSNEQWTENIHTALSYGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   +    G +    ++ A + + +     +A G   YE+SN    
Sbjct: 181 PHISSYALTVEPDTALERFIDKGVIKNVDDDKAEEQFLILTDELNAAGFIHYELSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S +N  YW    Y+GIGP AHS   V       +  K    ++K + +N   + ++E
Sbjct: 241 DFFSKNNSAYWLGKSYLGIGPAAHSFDGVQRSWNVQNNTK----YIKNILENELPI-QRE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSR 375
            LS   + +E++M GLR   G+S++  E   G+N        +Q Q +I++    ++   
Sbjct: 296 VLSVTDRYNEYVMTGLRTIWGVSLQRVESEFGKNYAKYL--QMQAQKYIDQELLFIEDEV 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+ T++G  + D + ++L 
Sbjct: 354 LKTTRKGKFLSDGLASDLF 372


>gi|85859404|ref|YP_461606.1| coproporphyrinogen III oxidase [Syntrophus aciditrophicus SB]
 gi|85722495|gb|ABC77438.1| coproporphyrinogen III oxidase [Syntrophus aciditrophicus SB]
          Length = 404

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 121/382 (31%), Positives = 196/382 (51%), Gaps = 14/382 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            +  ++ G+Y+H PFC  KC YCDF S          +F+ +   EM    ++   +   
Sbjct: 29  RRAEDNPGLYLHIPFCEIKCRYCDFFSVT--ELSRITDFLDAICREMNLRGKVF--KFFD 84

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPS++ P  +  +L+ + +++ +S   EIT+EANP+ + V+  +  R  G+NR
Sbjct: 85  TLYIGGGTPSVLRPDQLNRLLEHLHQHFKISKEAEITLEANPADISVSVMKELRSLGINR 144

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +++GVQS +   L FLGR HN  +AI AI    +  F     DLIY +P Q    W   L
Sbjct: 145 LNIGVQSFDNHILEFLGRRHNGRQAIRAIEASLQAGFGNFGIDLIYGIPGQKRNTWIKTL 204

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++AL++ + HLS YQLT+E  T   + +K G ++ P  +   +L+  T       G   Y
Sbjct: 205 EQALTFQIPHLSCYQLTVEPETPLGQSYKKGLILTPDNDELFELFMDTSEFLEKAGYCHY 264

Query: 252 EISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           E+SN +   +  S HN  YW +  Y+G+GP AHS              +  E +++ + +
Sbjct: 265 EVSNFARGDSRISRHNSKYWHHIPYLGLGPSAHSF----DGEKRWMNVRSLEDYIQRLNQ 320

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGF 367
               +   E L+ E+   E L +G R   GI + D+E   G NL    ER+   L   G 
Sbjct: 321 GKLPMEFCENLTREELQFEALFLGFRTSAGIDLDDFEEKFGWNLWSVKERDYELLLDAGH 380

Query: 368 IERVQFSRLRCTQRGMTMLDSV 389
           ++ V   RL+ T+ GM + DS+
Sbjct: 381 LKIV-NGRLQPTRTGMALADSL 401


>gi|167766643|ref|ZP_02438696.1| hypothetical protein CLOSS21_01149 [Clostridium sp. SS2/1]
 gi|167711766|gb|EDS22345.1| hypothetical protein CLOSS21_01149 [Clostridium sp. SS2/1]
 gi|291558660|emb|CBL37460.1| putative oxygen-independent coproporphyrinogen III oxidase
           [butyrate-producing bacterium SSC/2]
          Length = 382

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 129/384 (33%), Positives = 212/384 (55%), Gaps = 12/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +N++ +Y+H PFC  KC YCDF S  R  +     ++     E+ +  +    R + ++
Sbjct: 2   KTNTIELYIHIPFCKSKCKYCDFCSF-RAEEETIHAYLGKLKEELIFWGKKLAARDVVTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS +  ++I +I + I +++ +  + EITIEANP +V++     YR+ G+NRIS
Sbjct: 61  FIGGGTPSYLRREDIQMICETIFEHFHICEDAEITIEANPGTVDLKKLCTYRENGINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+QS  ++ L +LGR H   E + +   AR   F  ++ DL+ A+PKQT+T +E  L++
Sbjct: 121 FGLQSTVKEELEYLGRIHTYEEFLQSFDWARQAGFLNINVDLMSAVPKQTLTSYEENLRK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               + +H+S Y L IE+GT FY+ +K  +L LPSE   V +Y +T+ I + +G   YEI
Sbjct: 181 IAKLSPEHISAYSLIIEEGTPFYEDNKLEEL-LPSEEDEVLMYRMTEKILNEYGYDKYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G ES HNL YW +  Y+G+G  A S +          ++ + E     ++  G 
Sbjct: 240 SNYAKPGFESRHNLGYWSHIPYLGVGLNASSYLDEKRFENPSDMKDYLE-----IQSFGD 294

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIER 370
           A      LS  +Q +EF+ +GLR  +GIS K++    G ++D    + L    +QG ++ 
Sbjct: 295 AYEGARSLSVYEQMEEFMFLGLRKTKGISKKEFIERFGCSMDSVYGKPLIESMKQGMMKE 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            Q  R+  TQ G  + + V+    
Sbjct: 355 -QGDRVFLTQDGTLVSNQVLCEFL 377


>gi|317499475|ref|ZP_07957741.1| HemN C-terminal protein [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893249|gb|EFV15465.1| HemN C-terminal protein [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 382

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 128/384 (33%), Positives = 212/384 (55%), Gaps = 12/384 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +N++ +Y+H PFC  KC YCDF S  R  +     ++     E+ +  +    R + ++
Sbjct: 2   KTNTIELYIHIPFCKSKCRYCDFCSF-RAEEETIHAYLGKLKEELIFWGKKLAARDVVTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPS +  ++I +I + I +++ +  + EITIEANP +V++     YR+ G+NRIS
Sbjct: 61  FIGGGTPSYLRREDIQMICETIFEHFHICEDAEITIEANPGTVDLKKLCTYRENGINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+QS  ++ L +LGR H   E + +   AR   F  ++ DL+ A+PKQT+T +E  L++
Sbjct: 121 FGLQSTVKEELEYLGRIHTYEEFLQSFDWARQAGFLNINVDLMSAVPKQTLTSYEENLRK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               + +H+S Y L IE+GT FY+ +K  +L LPSE   V +Y +T+ I + +G   YEI
Sbjct: 181 IAKLSPEHISAYSLIIEEGTPFYEDNKLEEL-LPSEEDEVLMYRMTEKILNEYGYDKYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G ES HNL YW +  Y+G+G  A S +          ++ + E     ++  G 
Sbjct: 240 SNYAKPGFESRHNLGYWSHIPYLGVGLNASSYLDEKRFENPSDMKDYLE-----IQSFGD 294

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIER 370
           A      LS  +Q +EF+ +GLR  +GIS K++    G ++D    + L    +QG ++ 
Sbjct: 295 AYEGARSLSVYEQMEEFMFLGLRKTKGISKKEFIERFGCSMDSVYGKPLIESMKQGMMKE 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +  R+  TQ G  + + V+    
Sbjct: 355 -EGDRVFLTQDGTLVSNQVLCEFL 377


>gi|198276882|ref|ZP_03209413.1| hypothetical protein BACPLE_03087 [Bacteroides plebeius DSM 17135]
 gi|198270407|gb|EDY94677.1| hypothetical protein BACPLE_03087 [Bacteroides plebeius DSM 17135]
          Length = 377

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 191/379 (50%), Gaps = 12/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S     K  +  ++Q+   E++  +       I +I+FGGG
Sbjct: 3   GIYLHIPFCKRRCIYCDFFSTTENDK--KSTYVQALSKELELRKAYLDGEIIDTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +E ++   + + I K +TV+   EITIEANP  +        R    NR+S+G+Q+
Sbjct: 61  TPSQLEGKDFIQLFETIYKIYTVNPEAEITIEANPDDLTPEYIAMLRTLPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E +LR L R H A++A  A    R   F  +S DL+Y LP +T+  W+ +LQ AL   
Sbjct: 121 FKEDTLRLLHRRHTAAQAQQAYQHCREAGFQNISIDLMYGLPGETLEDWQKDLQTALQMH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  + + +   +    E+++V L+        ++G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWNLKEAHQVEETDEDLSVSLFKELIHTLKSNGYEHYEISNFCR 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G GP AHS           S+ ++ +       + G    EK
Sbjct: 241 PGFHSRHNSSYWTGKKYLGCGPSAHSYDGTSRQWNVASLSQYIQGI-----QEGTLNQEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L    + ++F++  LR   GI     +   G  L   C R      +QGF+  +    
Sbjct: 296 EELDLYTRYNDFIITRLRTAYGIPTHILKETFGETLFNYCMRMASPHLKQGFLT-LDNHV 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
           ++ T++G+ + D ++++L 
Sbjct: 355 MKLTEKGIFISDGIMSDLL 373


>gi|307244326|ref|ZP_07526440.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492292|gb|EFM64331.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus stomatis DSM 17678]
          Length = 382

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 117/384 (30%), Positives = 197/384 (51%), Gaps = 15/384 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC KKC YCDF S V       ++++     E    +       I +IF GGG
Sbjct: 5   GLYIHIPFCAKKCGYCDFTSLVGNGTQ-IDDYLSYLDKEFNLYKAGNLIDDIETIFIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    +  +   + KN  +S   E T+E+NP S+  +  +  +  G+NR+S+G+Q+
Sbjct: 64  TPSILSASQLERLFSIVRKNVDLSKLREYTMESNPGSLTRDKLELMKAGGLNRLSIGLQA 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+FL R H   E + +  LAR++ F  ++ DL++A   QT+  W   L+R +S  
Sbjct: 124 SQDHLLKFLERIHTYEEFLESYRLARSVGFDNINIDLMFAFQGQTLEDWRETLERVVSLE 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y L IE+GT F+ M++DG L    E+  V +Y  T    +  G   YEISN + 
Sbjct: 184 PDHISAYSLIIEEGTKFFNMYEDGSLTDYDEDEYVQMYRYTIDYLADKGYGQYEISNFAK 243

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E  HNL YW   +Y G+G GA   +    +       K   ++ + +      +  +
Sbjct: 244 QDKECRHNLIYWDDREYYGLGLGASGYLGGKRYTNY----KDMFNYYEKLDAGERPIDFE 299

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-------IECERNLQRQGFIERV 371
           E +S+ ++ +E+L++GLR  EGIS   +     +N+D       IE   +    G I + 
Sbjct: 300 ETISNREKLNEYLILGLRKIEGISRTKYLDR-LKNIDEDKYKENIEIINSYIGSGHIIQ- 357

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +R +Q G+ + D++  +L +
Sbjct: 358 EGDHIRLSQTGLEISDTISLDLLL 381


>gi|255282398|ref|ZP_05346953.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bryantella formatexigens DSM 14469]
 gi|255266982|gb|EET60187.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bryantella formatexigens DSM 14469]
          Length = 382

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 125/391 (31%), Positives = 208/391 (53%), Gaps = 24/391 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFCV+KC YCDF S     +  Q  +I+  L E++  +   G   IS++FF
Sbjct: 2   RPLQIYIHIPFCVRKCAYCDFLSFAADQET-QRAYIRMLLREIEAWQDR-GDEVISTVFF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + I L+++ + K ++ + + EIT+E NP ++       YR+AG+NR+S+G
Sbjct: 60  GGGTPSVLPAEEITLVMEALKKKFSFAGDAEITLECNPGTLTAEGLSRYRRAGINRLSIG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS +++ LR LGR H   E   +  LAR   F  ++ DL+ ALP Q+   W   L++ L
Sbjct: 120 LQSAQDKELRLLGRIHTWEEFEESYRLARAAGFANINVDLMSALPGQSPAAWRDTLEKVL 179

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDG---------DLVLPSENVAVDLYNLTQSITSAH 246
           + A +H+S Y L IE+GT FY+ +++            +LPSE    ++Y +T+ +    
Sbjct: 180 ALAPEHISAYSLIIEEGTPFYERYREDAQRRERGEVCRILPSEEEEREMYWMTEKLLKER 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN++  G    HN  YW   +Y+G G GA S +         S++++ +    
Sbjct: 240 GYERYEISNYAQPGFACRHNCGYWERREYLGFGLGAASLMDHTRFADTASLQQYLD---- 295

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQ 363
                      +  L+  ++ +E + +GLRLR G+S   +    G  ++    E  + L+
Sbjct: 296 ----GRWRGETQGRLTRAEEMEETMFLGLRLRRGVSFAHFYRTFGVTMEEIYGEVLQRLE 351

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           RQ  +ER +  R+  T+RG  + + V A   
Sbjct: 352 RQRLLERTE-ERIFLTKRGTDISNYVCAEFL 381


>gi|289166179|ref|YP_003456317.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           longbeachae NSW150]
 gi|288859352|emb|CBJ13288.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Legionella longbeachae NSW150]
          Length = 374

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 203/377 (53%), Gaps = 11/377 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + ++++IQ+ + +++   +    R I SIF G
Sbjct: 3   PLSLYIHIPWCIRKCPYCDFNSHKSPDILPEQSYIQALIADLKADLERFEIREIGSIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q    +   +     +S ++EIT+EANP +VE   F  YR+ G+NR+SLG+
Sbjct: 63  GGTPSLLSAQAYETLFTELQCILPLSQDIEITMEANPGTVEQQRFTDYRQLGINRLSLGI 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     LR LGR H+  +A  AI  ARN  F  ++ D+++ LP+Q++ Q   +L+ AL+
Sbjct: 123 QSFNHDHLRALGRIHDGQQAHRAIESARNAGFTNLNLDIMHGLPQQSIIQGMEDLRSALA 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +HLS YQLT+E  TLFYK        LPSE+ +  L     S+    G   YEIS  
Sbjct: 183 HQPEHLSWYQLTLEPNTLFYKK----KPALPSEDESCLLEEEGLSLLKTSGFERYEISAF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S HNLNYW +GDY+GIG GAH ++   +  +     + P+ +L         + 
Sbjct: 239 AQPNHRSRHNLNYWLFGDYLGIGAGAHGKITTKNGIIRTRKHRQPKEYLDT---QKPFLA 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
             E ++++    EF++   RL + I ++ +    G      +   R  +++  I   + +
Sbjct: 296 HMETVNTKDLLFEFMLNTTRLEQIIPLELFTQTTGLELKELLPKLRMAEKKNLITLAE-T 354

Query: 375 RLRCTQRGMTMLDSVIA 391
             + T  G    + + A
Sbjct: 355 YWQVTPLGRRYTNDLQA 371


>gi|329728457|gb|EGG64894.1| putative coproporphyrinogen dehydrogenase [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 385

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 189/380 (49%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L L +E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLANEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 304

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 305 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 363

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 364 IALTNRGKVIGNEVFEAFLI 383


>gi|311064231|ref|YP_003970956.1| coproporphyrinogen oxidase (NAD) [Bifidobacterium bifidum PRL2010]
 gi|310866550|gb|ADP35919.1| HemN Coproporphyrinogen oxidase (NAD) [Bifidobacterium bifidum
           PRL2010]
          Length = 420

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 119/415 (28%), Positives = 183/415 (44%), Gaps = 45/415 (10%)

Query: 25  WPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSISSIFF 76
            PFC+++C YCDFN++          + N+    + EM+ +R            +S++FF
Sbjct: 1   MPFCMRRCGYCDFNTYTATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEPPVSTVFF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++  +++ ++LD +   W +    EIT EANP +V+        + G  R+S G
Sbjct: 61  GGGTPTILPARDLVMMLDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGFTRVSFG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS     L+ L R H  +   A +  A     R S DLIY  P +++  W   ++ A+ 
Sbjct: 121 MQSAVPHVLKNLDRTHTPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVRTAVD 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V+H+S Y LT+E  T   +    G L  P ++     Y +   + +A GL  YEISN 
Sbjct: 181 LGVNHVSAYALTVEPTTKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYEISNW 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-----------------------VGSHRV 293
           S  G ES HNL YWR  D+ G+GPGAHS                          V S  +
Sbjct: 241 SRPGYESRHNLGYWRNVDWAGLGPGAHSHYNTVMGSSTDGDAANSDAAGDVSASVTSTSM 300

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV---------- 343
                 HP  W   +          E +S  +  +E +M+GLR+REG+ +          
Sbjct: 301 RGWDIAHPRMWGMAINDGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRHIEAV 360

Query: 344 ---KDWEMLAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSVIANLA 394
              +D      R +D  C   L   G I           T+RG  + D+VI  + 
Sbjct: 361 NRAQDAAQGTLRIIDDACLTPLVGDGLITLDPTTGHTVATRRGRLLNDAVIERMF 415


>gi|291165719|gb|EFE27767.1| oxygen-independent coproporphyrinogen III oxidase [Filifactor
           alocis ATCC 35896]
          Length = 379

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 112/385 (29%), Positives = 192/385 (49%), Gaps = 12/385 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              + +Y+H PFC +KC YCDF S  +   V Q ++I     E+   ++    R++ +IF
Sbjct: 2   KKDISLYIHIPFCKQKCSYCDFVSSAQSEDV-QTHYISLLCKEILGWKEYLSDRTVKTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++   N+  + + +     + S  E ++E NP SV  +     ++  VNR+S+
Sbjct: 61  IGGGTPSILSVSNMQTLFNTLHSL-PIPSETEFSMECNPESVTADKIHCMKQNAVNRLSI 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  ++ L+ LGR H+  + + A    +   F  ++ DL++ALP QT+      LQ+ 
Sbjct: 120 GLQSTNQKELQLLGRCHSYEQFLHAYEQIQQSGFDNINIDLMFALPNQTIQDHIRTLQKV 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   +H+S Y L +E+GT   K        +PSE   +++Y  T      +G   YEIS
Sbjct: 180 VSLKPNHISAYSLILEEGTQLKKQVDHHYCEIPSEEEYIEMYRNTIHFLEINGYEQYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S    E  HN+ YW  G+YIG G  A S V        +S++++ E      +    A
Sbjct: 240 NFSKQNHECKHNIVYWERGEYIGFGVSASSFVDKKRFTNPMSLQEYSEHTFYTPK----A 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGIS----VKDWEMLAGRNLDIECERNLQRQGFIER 370
           V   E +  E+  +E + +GLR+ +G+S     + +    G     +   +LQ +G I  
Sbjct: 296 VSSIEQIDLEEAFEETIFLGLRMNKGLSIPWLKQQFPSFTGEQF-KKTLSSLQNRGLIYP 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            + + L+ TQ G+ + + V   + +
Sbjct: 355 TENNILQLTQEGIEISNQVFLEILL 379


>gi|303326275|ref|ZP_07356718.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio sp. 3_1_syn3]
 gi|302864191|gb|EFL87122.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio sp. 3_1_syn3]
          Length = 447

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 127/385 (32%), Positives = 202/385 (52%), Gaps = 17/385 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTGPRSISSI 74
           VY+H PFC  +C YC F+S      V         +++ + L E+       G   + ++
Sbjct: 29  VYIHVPFCRTRCRYCAFHSIPLGRGVEPAASPLLRDYLDTLLLELAHWGDRLGGTEVQTV 88

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGVNRI 133
           FFGGGTPSL+ P+ + ++L+ +A+ +T+S   EIT+EANP S+  +     Y  AGVNR+
Sbjct: 89  FFGGGTPSLLPPRIVGIVLERLARCFTLSPKAEITLEANPESLRGSQSVPQYLAAGVNRL 148

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QSL+E  LR LGR H A +++ A+  AR      ++ DL++ LP Q++ QW   L+
Sbjct: 149 SIGIQSLDESMLRLLGRPHRAQDSLHAVFAAREAGCANINMDLMWGLPGQSVRQWLQTLK 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+  + DH+S Y LT+E GT      ++G L LP E     ++    +   A G   YE
Sbjct: 209 DAVRMSPDHISAYGLTLEPGTALELDCEEGRLALPPERDQNIMFMEGAAFLEASGYLHYE 268

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN + +G +  HNL YW   DY+G+GP A S +         +      +W    R+  
Sbjct: 269 ISNFARMGFQCRHNLGYWEGADYLGLGPSATSTIAG----RRWTNPAGQRAWDARAREGS 324

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIE 369
               E E L+   +  E +M+ LR   G+ +K +  + GR+         + L   G I 
Sbjct: 325 LG-AEVENLTPTVRVLELIMLRLRTSRGMRLKAYREMTGRDFLRDHQRLIQALHENGLI- 382

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           R++   LR T+ GM + +S+++NL 
Sbjct: 383 RIRNGYLRLTRSGMLVSNSILSNLF 407


>gi|323345211|ref|ZP_08085434.1| coproporphyrinogen dehydrogenase [Prevotella oralis ATCC 33269]
 gi|323093325|gb|EFZ35903.1| coproporphyrinogen dehydrogenase [Prevotella oralis ATCC 33269]
          Length = 371

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 118/377 (31%), Positives = 190/377 (50%), Gaps = 10/377 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            G+Y+H PFC  +C YC F S         + ++++   EM+  +     R I +I+FGG
Sbjct: 2   YGLYIHIPFCESRCIYCGFYS--TTQSEFIDRYVRAVCKEMELRKDYLPDRRIRTIYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  ++++ I   I K +      E+T+E NP  V  +     R   VNR+SLG Q
Sbjct: 60  GTPSLLSHRHLSTIFHNINKVYDTGCLQEVTLECNPDDVTADFASALRSLPVNRVSLGAQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  +  LRFL R H + E ++A+  L R     +S DL++    QT+ +W  ++ R L+ 
Sbjct: 120 TFSDDRLRFLNRRHTSLEIVSAVSDLRRAGINNISIDLMFGFSGQTLGEWHTDIDRTLAL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V+H+S Y L  E+GT  +KM   G +    E  +  +Y +      + G   YEISN +
Sbjct: 180 EVEHISAYSLMYEEGTRLFKMLSLGKVQETDEEKSRSMYEILIDKLCSAGYEHYEISNFA 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW+   YIGIG  AHS       R       + E +++ + ++G   +E
Sbjct: 240 KPGYRSCHNSSYWQAVPYIGIGAAAHSY----DCRSRQWNIDNIELYMQGI-EHGEIPME 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           KE LS E   ++ +   LR  EGI +   +    RN  ++  R     G +E +   R R
Sbjct: 295 KEILSPETVYNDTITTALRTYEGIDLNK-QHPNFRNYFMKNARKHIASGLLE-INGDRAR 352

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G+ + D V+++L 
Sbjct: 353 LTRKGLYVSDMVMSDLM 369


>gi|163816740|ref|ZP_02208103.1| hypothetical protein COPEUT_02930 [Coprococcus eutactus ATCC 27759]
 gi|158447997|gb|EDP24992.1| hypothetical protein COPEUT_02930 [Coprococcus eutactus ATCC 27759]
          Length = 426

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 118/405 (29%), Positives = 208/405 (51%), Gaps = 28/405 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHV------RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
             L +Y+H PFCVKKC YCDF S        + Y V +E +I++   E++    L    S
Sbjct: 22  RELSIYIHIPFCVKKCVYCDFLSFPVGTSCMQGYGVYREKYIEALCEELRSYAYLAETHS 81

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +I+ GGGTPSL+E   I +I+  +   + V+ + EI+IE NP ++       Y   G+
Sbjct: 82  VKTIYIGGGTPSLLEADEITMIMTTVRSIFDVAEDAEISIEVNPGTLTSRKAADYIANGI 141

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS +   L+ LGR HN  + +AA  +AR   F  ++ DL+  +P QTM  +  
Sbjct: 142 NRMSIGLQSAQRDELQVLGRIHNYDQFLAAFDMAREAGFRNINIDLMSDIPGQTMRSYLD 201

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++ L    +H+S Y L +E GT      +     +P E+V  ++Y++T  +  + G H
Sbjct: 202 TLEKVLRCKPEHISSYSLIVEAGTPLAASPELIS-RIPDEDVDREMYDITNKLLDSGGYH 260

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK--M 307
            YEISN++  G E  HN+ YW  G+YIG+G GA S +    +     I ++ ++      
Sbjct: 261 RYEISNYARHGYECRHNIVYWTLGEYIGVGIGAASFLYGRRYTNTSDIGEYIDTMENCHE 320

Query: 308 VRKNGHAVVEK--------------EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           +   G  V                 E L++++  +E++ +GLR+  G+S + +    G +
Sbjct: 321 LVTYGDPVANSRKVRDLLEQMRTVDEELNTDRLMEEYMFLGLRMISGVSAERFNDYFGHS 380

Query: 354 LDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +       + +    G +E      +R T++G+ + ++++A+  +
Sbjct: 381 IYDIYGPVIDKYKVSGHLE-DDHGLIRLTKKGIDVSNTILADFLI 424


>gi|283851955|ref|ZP_06369231.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           sp. FW1012B]
 gi|283572679|gb|EFC20663.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           sp. FW1012B]
          Length = 375

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 126/378 (33%), Positives = 186/378 (49%), Gaps = 10/378 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S         E F  +   EM+   +  G   + +++FGGGT
Sbjct: 3   LYIHVPFCRGKCRYCSFVSRPM-DMAEVEVFAAALPLEMRHWGKKLGRPRVETVYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNNFQGYRKAGVNRISLGVQS 139
           PSL+ P  ++ I+  I +++ +   VE T EANP S ++    +   K GVNR+SLGVQS
Sbjct: 62  PSLLPPWALSRIIPEIGRHFDLDPAVEWTFEANPDSALDGQYLKSLLKYGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L +  LRFLGR H+A+ A+AA  LAR   F  +S D I+ LP Q    W   L+ A++  
Sbjct: 122 LSDTDLRFLGRPHDAAGAVAAYGLARQVGFKNISLDFIWGLPGQREAAWLETLKVAVNLR 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y LT+E GT   +    G + LP E     ++          G   YEISN + 
Sbjct: 182 PEHLSCYGLTVEPGTPLAEDVAAGGVALPPEGEQGRMFVHGAEFLEEQGYLQYEISNFAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G  S HN  YW   DY+G+GPGA S +          +      W  + R         
Sbjct: 242 MGFMSRHNSGYWEGRDYLGLGPGAVSTLGGLRFENPGDV----RQWAALARAGKCGQAA- 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRL 376
           E L+  ++  E +M+ LR  +G+ +  +    GR+   D E      RQ  + R+    L
Sbjct: 297 EALTPAERVREMVMLSLRTAKGLRLAAYRKATGRDFIKDNEALVTALRQKDLIRLSAGHL 356

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T+ G  + + ++  LA
Sbjct: 357 RLTKNGFLVSNVILERLA 374


>gi|296140464|ref|YP_003647707.1| oxygen-independent coproporphyrinogen III oxidase [Tsukamurella
           paurometabola DSM 20162]
 gi|296028598|gb|ADG79368.1| oxygen-independent coproporphyrinogen III oxidase [Tsukamurella
           paurometabola DSM 20162]
          Length = 391

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 113/385 (29%), Positives = 172/385 (44%), Gaps = 15/385 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSI 71
            S   G+Y+H PFC  +C YCDFN++      G    + + ++   E+   R   G   +
Sbjct: 16  SSAPFGLYLHVPFCATRCGYCDFNTYTAGELGGSSSPQAWAEAIDGELALARATVGDVPV 75

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++F GGGTPSL+    +A +LD   +++    N EIT E+NP S     F+  R AG  
Sbjct: 76  HTVFVGGGTPSLLGGDGLAALLDTARRHFRFVDNAEITTESNPESTSPEFFRRLRDAGFT 135

Query: 132 RISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QS     L  L R H       AA       F  ++ DLIY  P +T       
Sbjct: 136 RVSLGMQSAAAHVLTVLDRTHTPGRAVAAAKEARAAGFEHVNLDLIYGTPGETDADLAAS 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L   VDH+S Y L +E GT   +  + G+L    ++V    Y          G   
Sbjct: 196 LDAVLDAGVDHVSAYALIVEDGTALARRIRRGELPDTDDDVLARRYEQVDGALRGAGFDW 255

Query: 251 YEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YE+SN +    A   HN  YW   ++ G GPGAH  +        +   KHP  +   V 
Sbjct: 256 YEVSNWARSDAARCHHNELYWEGANWWGAGPGAHGHIAGTR----VWNIKHPARYADAVG 311

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           +    +   E L++EQQ  E +M+ +R+R G+ +        R  + E       +G ++
Sbjct: 312 RGELPLAGHETLTAEQQHVEDVMLRVRMRSGLPLAVL-----RPAERERADAEAAEGNLD 366

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           RV  + +  T  G  + D V+  + 
Sbjct: 367 RVGAAYV-LTDAGRLLADGVVRRIL 390


>gi|153814298|ref|ZP_01966966.1| hypothetical protein RUMTOR_00507 [Ruminococcus torques ATCC 27756]
 gi|317500016|ref|ZP_07958251.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|331087754|ref|ZP_08336680.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848694|gb|EDK25612.1| hypothetical protein RUMTOR_00507 [Ruminococcus torques ATCC 27756]
 gi|316898501|gb|EFV20537.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|330409735|gb|EGG89171.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 423

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 121/424 (28%), Positives = 204/424 (48%), Gaps = 48/424 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +YVH PFCVKKC YCDF S   + +     ++++   E++  ++      +++IF
Sbjct: 2   KKELELYVHIPFCVKKCAYCDFLSFSAKQEE-VSAYVEALAEEIKGKKEQFSDYCVTTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS++E    A I   + +++ ++ N EIT+E NP +V       ++  GVNR+S+
Sbjct: 61  LGGGTPSILEGVYTASIFRALRESFDIAENAEITMEVNPGTVSEEKINMWKTCGVNRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS+++  L+ LGR H   E +    + R   F  ++ DLI A+P QT   WE  L+  
Sbjct: 121 GLQSVDDGELKMLGRIHTYDEFLTTWKMVRKAGFHNVNIDLISAIPGQTKKSWETTLRTV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH-------------------------------KDGD 223
                +H+S Y L IE+GT+F  ++                                   
Sbjct: 181 AQLQPEHISAYSLIIEEGTVFGTIYGEDGERICQKELLSRESSMPEVSDKDGNIRKDRQI 240

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           L LP E+    +Y +T+ I   +G   YEISN++  G E  HNL YW   +Y+G+G GA 
Sbjct: 241 LPLPDEDTERAIYEITEKILREYGYERYEISNYAKPGYECRHNLGYWERREYLGLGLGAS 300

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNG----------HAVVEKEFLSSEQQADEFLMM 333
           S +          ++ +     K V  +G              E   LS ++Q +EF+ +
Sbjct: 301 SLIAEHRFCNTDKMDVYIRL-NKTVDPDGKKEESKKAVWEKAEEVSVLSVQEQMEEFMFL 359

Query: 334 GLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           GLR  +G+S K +    G  +D    E    L+++  + + +  ++R T+RG+ + + V+
Sbjct: 360 GLRKTDGVSEKSFFETFGVQIDTVYGETIGKLEKERLLIK-EKGQIRLTERGVDISNYVM 418

Query: 391 ANLA 394
           +   
Sbjct: 419 SEFL 422


>gi|57234372|ref|YP_181584.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dehalococcoides ethenogenes 195]
 gi|57224820|gb|AAW39877.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Dehalococcoides ethenogenes 195]
          Length = 378

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 125/383 (32%), Positives = 197/383 (51%), Gaps = 12/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             SL +Y+H+PFC++KC YC F S+  R     + +++    E++            S++
Sbjct: 3   DTSLALYLHFPFCLQKCGYCSFVSYPARLDCLPD-YVKCLRKEIKSRAS---GLYFHSLY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A IL GI     +  + EIT EANP ++ +      +  G+NR+SL
Sbjct: 59  FGGGTPSLLSPSQVADILAGIRTAAHLLPDAEITFEANPGTLALPYLPEIKSLGINRLSL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS     L  LGR HNA++A  A   AR   F  +S DLIY LP  +++ ++  L  A
Sbjct: 119 GIQSFSGAELTMLGRLHNAAKARQAYKQARAAGFNNISLDLIYGLPDSSVSSFKKNLAEA 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ A +H+SLY LT+E+ T  Y+  ++G L   +   A D Y   + I +  G   YEIS
Sbjct: 179 LALAPEHISLYGLTLEEDTPMYRQVQEGLLPEINAETAADQYQAAEDILAKAGYRHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW+   Y+G+G   HS ++        S++++   W   +      
Sbjct: 239 NWAKPGYESRHNLTYWQNRPYLGLGAAGHSFLENWRLANTSSLDEYLNRWQNDL---PPT 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERV 371
             E  +L  E Q  E +++GLRL +GI+ +D E   G+++  +    +Q     G +E+ 
Sbjct: 296 PSENIYLDLENQLAETIILGLRLDKGITAEDIENRFGQHVMDKYFPVIQECTGLGLLEKS 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               +  T RG  + + V     
Sbjct: 356 DGG-ISLTPRGRLLSNEVFWRFL 377


>gi|320096044|ref|ZP_08027647.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977023|gb|EFW08763.1| coproporphyrinogen dehydrogenase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 407

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 116/385 (30%), Positives = 175/385 (45%), Gaps = 30/385 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLT-- 66
           + G     L +YVH PFC  +C YCDFN++  ++  G +   +  S L E     ++   
Sbjct: 20  VEGDAGRPLSLYVHVPFCRVRCGYCDFNTYTAQFGAGADLDTYAGSVLAEAALATRVLDG 79

Query: 67  ---GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
              GPR  S++FFGGGTP+++ P  +A  LDG+ +   ++   E+T+EANP +V      
Sbjct: 80  AGFGPRPASTVFFGGGTPTMLAPGELARALDGLRERIGIAPGAEVTLEANPDTVSARGLA 139

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           G   AG  R+S G+QS   + L  L R H       A+  AR     +S DLIY  P +T
Sbjct: 140 GLADAGFTRVSFGMQSAVPRVLAALDRTHAPERVPEAVAWAREAGLDVSVDLIYGCPGET 199

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L  A     DH+S Y L +E+GT        G+L  P  +     Y    ++ 
Sbjct: 200 LDDWRASLLAATRMRPDHISAYALVVEEGTRMGAQVARGELPAPDPDDEAAKYEEADAVL 259

Query: 244 SAHGLHAYEISNHSFLG------------------AESLHNLNYWRYGDYIGIGPGAHSR 285
           SA G   YEISN + +G                    S HNL YWR  D+ G+GPGAHS 
Sbjct: 260 SAAGYRWYEISNFALVGPDEAGALDRGALAPTALARASRHNLAYWRDWDWWGLGPGAHSH 319

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +      +     KHP ++   + +        E L +  +  E +M+ +R   G+++ D
Sbjct: 320 IGA----LRWWNVKHPAAYASRLARGLSPAHSGEALDAPTRDLERVMLAVRTGGGVALAD 375

Query: 346 WEMLAG-RNLDIECERNLQRQGFIE 369
               +G  +        L   G I+
Sbjct: 376 TPAGSGAVSGGRGRVEGLVADGLID 400


>gi|167759410|ref|ZP_02431537.1| hypothetical protein CLOSCI_01757 [Clostridium scindens ATCC 35704]
 gi|167662967|gb|EDS07097.1| hypothetical protein CLOSCI_01757 [Clostridium scindens ATCC 35704]
          Length = 363

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 29/384 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFC+ KC YCDF S   +    Q  +++S    ++    L     + SIF 
Sbjct: 2   RPLELYIHIPFCISKCKYCDFLSAPSKEGERQ-KYVKSLCKRIRSYGTLAEAYHVVSIFI 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++P  I+ I   + + + V  + EITIE NP +V       YR+AG++R+S+G
Sbjct: 61  GGGTPSLLDPVQISAIFHAVRETFMVDKDAEITIEMNPGTVSPEKLIAYRQAGISRLSIG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS+  + L  LGR H   E +    +A R  F  ++ DL+  +P QT+  W+  L+R  
Sbjct: 121 LQSIRNEELEVLGRIHTFEEFLHTYEMARREGFGNINIDLMSGIPFQTLNGWKESLKRVA 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK--DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               +H+S Y L IE+GT FY+ ++    +  LP E     +Y+ T+ I  A+G   YEI
Sbjct: 181 DLEPEHISAYSLIIEEGTPFYERYRDARHEEELPDEETERQMYHHTREILGAYGYRRYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G E  HNL YW   +Y+GIG GA S +                       +   
Sbjct: 241 SNYAKEGYECRHNLGYWNRTEYLGIGTGAASLIGNRRWS-----------------EGEE 283

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
                E LS E Q +E++ +GLR  EG++  ++    G  ++ +     + +  +G +E 
Sbjct: 284 P----EALSRENQMEEYMFLGLRKMEGVTKSEFLKEFGCTMESKYSHVLKRMYAEGLMEE 339

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
                +R T +G+ + + V++   
Sbjct: 340 -SGDYVRLTDQGIDISNYVMSEFL 362


>gi|88195392|ref|YP_500196.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|87202950|gb|ABD30760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
          Length = 374

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 189/380 (49%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRILKTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RIS+GVQ+
Sbjct: 60  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L L +E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLANEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I   +   
Sbjct: 294 NKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVE-KNDV 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T RG  + + V     +
Sbjct: 353 IALTNRGKVIGNEVFEAFLI 372


>gi|184156726|ref|YP_001845065.1| coproporphyrinogen III oxidase [Acinetobacter baumannii ACICU]
 gi|332873137|ref|ZP_08441094.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6014059]
 gi|183208320|gb|ACC55718.1| Coproporphyrinogen III oxidase [Acinetobacter baumannii ACICU]
 gi|332738649|gb|EGJ69519.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii 6014059]
          Length = 368

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 129/378 (34%), Positives = 203/378 (53%), Gaps = 18/378 (4%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQEN----FIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P+CV+KCPYCDFNSH              ++++ + + +   ++   RSI S+F GGGT
Sbjct: 1   MPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRSIHSVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSLI  +  A + + +        + EIT+EANP ++E + F GY +AG+NR+S+GVQ+ 
Sbjct: 61  PSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGINRLSIGVQTF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT+ Q   +L+ A+    
Sbjct: 121 NTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGA 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S YQLTIE  T+F++       VLP + V  D+    ++   A+G   YE+S     
Sbjct: 181 THISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYLKANGFINYEVSAWRKE 236

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HNLNYW++GDY+ IG GAH +V            + P+ +L  V      + + E
Sbjct: 237 -QPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAEHLQMKKIE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRL 376
              +++   EF+M  LRL +G+  + +E   G +LD   +       R+  +E     RL
Sbjct: 296 ---ADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTSLRSRELLVE--DSDRL 350

Query: 377 RCTQRGMTMLDSVIANLA 394
            CT++G   L+SV+    
Sbjct: 351 ACTEQGHIFLNSVLEEFL 368


>gi|323699377|ref|ZP_08111289.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           sp. ND132]
 gi|323459309|gb|EGB15174.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           desulfuricans ND132]
          Length = 409

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 117/388 (30%), Positives = 195/388 (50%), Gaps = 13/388 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
                 L +Y+H PFC  +C YC F+S           ++   L E++   +      + 
Sbjct: 26  ADDGKGLLLYIHVPFCRSRCHYCSFHSQ-SFDPTTFAWYLSLLLREIELWGRRLQRPRLR 84

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVN 131
           +++FGGGTPSLI    +  I+  + K + ++   E TIEANP S  +V+ F+G    G N
Sbjct: 85  TVYFGGGTPSLIPLAGLDRIMAALRKAFVLNPGAETTIEANPDSAHDVSYFRGLLSLGFN 144

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QSL++  L+ +GR H+ + A  A   AR   F  +  DLI+ LP Q +  W  +
Sbjct: 145 RLSLGMQSLKDADLQVMGRPHSVAMAYQAFDQARRAGFGNIGVDLIWGLPGQRLKVWLDQ 204

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMH-KDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           L+       +H+S Y LT+E+GT+  +   + GDL LP +     ++        + G  
Sbjct: 205 LRIVSEMRPEHISAYNLTLEEGTVMARRCGEGGDLALPLDQEQGRMFVYGAEYLESVGYL 264

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YE+SN + +G  S+HN  YW   DY+G+GP A S +     R   ++ ++ + +   VR
Sbjct: 265 HYEVSNFARMGFTSVHNSGYWDGSDYLGLGPSAVSTLG----RRRFTVPRYMDEYDAYVR 320

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQG 366
                  + E L+ +   +E +M+ LR   G+ +K++    G +L     +    L R+ 
Sbjct: 321 -GELVGNDYEELTDDILLEEMVMLSLRTSRGLDLKEYRRRTGLDLVKRKEQLISALHREN 379

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            + R+   RLR T+ GM + + +I  LA
Sbjct: 380 LV-RISGGRLRLTKNGMLVSNVIIERLA 406


>gi|197106936|ref|YP_002132313.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
 gi|196480356|gb|ACG79884.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
          Length = 380

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 150/380 (39%), Positives = 220/380 (57%), Gaps = 12/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQ-SFLTEMQWMRQLTGPRSISSIFF 76
            +GVYVHWP+C + CPYCDFN +  R +  +   +  + + +++    LTGPR + S+FF
Sbjct: 11  PVGVYVHWPYCARICPYCDFNVYRARGREAEARALASAIIADLRAQAALTGPRELVSVFF 70

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++P     I+    + W+ ++++E+++EANP+  E + F  +  AGVNR+SLG
Sbjct: 71  GGGTPSLMDPAWAGEIVAEAKRLWSPAADLEVSLEANPTDAEADRFAAFADAGVNRLSLG 130

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+L++++L+ LGRNH A E   A   A   FPR+S DLIYA P QT   W  EL  AL 
Sbjct: 131 LQALDDEALKLLGRNHGAEEGRRAARAAARAFPRLSVDLIYARPGQTPQAWAGELAAALD 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +H+S YQLTIE GT F +  + G +V P+E  A +L+  TQ++  A G  AYE+SNH
Sbjct: 191 LGPEHVSPYQLTIEAGTAFDRAVRRGTIVPPAEEPAAELFETTQAVLEAAGFDAYEVSNH 250

Query: 257 SF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    A S HNL YW+  DY+G+GPGAH R+     R+A      P  +++       A 
Sbjct: 251 ARGEAARSRHNLVYWQGLDYVGVGPGAHGRITTPEGRLATFAAPRPADYIEG------AG 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             +E L+  + A+E L+ GLR+ EG+   +   LA   L      +L   G +     SR
Sbjct: 305 GSRERLTPVEAAEERLLGGLRIAEGVGRDEIAALA---LPEGRIAHLVELGLLA-DDPSR 360

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           LR T  G  +LD+V   L  
Sbjct: 361 LRATAEGRRLLDAVTRALLA 380


>gi|125624230|ref|YP_001032713.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493038|emb|CAL98001.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071010|gb|ADJ60410.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 379

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC   C YCDF   +   +   + +I++ + E Q ++     + + +++ GGG
Sbjct: 7   SAYFHIPFCSHICYYCDFAKVLMTGQ-PVDAYIEAIIEEFQSLK----IKKLKTVYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q +  +L  IA    +    E T+EANP  +  +  +    + VNRISLGVQ+
Sbjct: 62  TPSVLSAQQLERLLTAIADQLDLDFLEEFTVEANPGDLSDDVIKVLAHSAVNRISLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR HN ++   +I   +   F  ++ DLIYALP QTM   + ++ + L+  
Sbjct: 122 FNNTLLKKIGRTHNEAQVYDSIERLKRAGFENITIDLIYALPGQTMEMVKSDVDKFLALD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H++LY L +E  T+F    + G L LPSE+   D+Y     I + HG   YE+SN   
Sbjct: 182 LPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAQHGYQHYEVSNFGR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW   +Y GIG GA   +    ++    +      +LK    +    V +
Sbjct: 242 PGFESKHNITYWDNEEYYGIGAGASGYLSGVRYKNYGPVH----HYLKAAANDKR--VNE 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E LS + Q +E + +GLR + G+ V+ +E     + D    E    L +Q  +      R
Sbjct: 296 EVLSKKSQIEEEMFLGLRKKSGVLVEKFEAKFNCSFDKLYGEQITELIKQKLL-YDDRER 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T +G  + ++V     +
Sbjct: 355 IHMTDKGFELGNNVFEKFLL 374


>gi|150024318|ref|YP_001295144.1| coproporphyrinogen oxidase [Flavobacterium psychrophilum JIP02/86]
 gi|149770859|emb|CAL42324.1| Probable coproporphyrinogen oxidase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 377

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 113/379 (29%), Positives = 188/379 (49%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       ++  + +   E+   +     ++I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKKKDEMVLAIAKEIAMRKNEFKNQTIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+   ++  +++ +  N+ VS N EITIEANP  +  N      K  +NR+S+G+QS
Sbjct: 61  TPSLLNVSDLIFLINQVYSNYNVSQNTEITIEANPDDLSENRIIELSKTPINRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HN++EA   + +A   F  +S DLIY  P  +  +W   ++ AL   +
Sbjct: 121 FFEEDLQLMNRAHNSAEAKKCLEIATQYFDNISVDLIYGTPGMSNERWLENIKIALDLNI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T  +K  KDG +    + +A + + +       +    YE+SN    
Sbjct: 181 PHISSYALTVEPKTALHKFIKDGMMPQLDDAMAHEQFLILVDTLETNKFIHYELSNFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S +N  YW    YIG+GP AHS       +       +   +LK + +N     E E
Sbjct: 241 NYFSKNNSAYWLGKKYIGVGPSAHSY----DGKNRSWNLSNNGRYLKSISENTLP-SETE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV----QFSR 375
            LS   + +E++M GLR   G+S+   E   G        +N Q+  +++      + + 
Sbjct: 296 TLSKTDKYNEYIMTGLRTIWGVSLNKIESEFGEKYLKYLLKNTQK--YLDDTKLILENNI 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T++G    D + ++L 
Sbjct: 354 LRTTRKGKFFCDGIASDLF 372


>gi|329121170|ref|ZP_08249798.1| coproporphyrinogen dehydrogenase [Dialister micraerophilus DSM
           19965]
 gi|327470252|gb|EGF15713.1| coproporphyrinogen dehydrogenase [Dialister micraerophilus DSM
           19965]
          Length = 378

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 115/384 (29%), Positives = 200/384 (52%), Gaps = 12/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +  LG+Y+H PFC  +C YC+F S   +     + F+++F  E++        +   +I+
Sbjct: 2   TEDLGLYLHIPFCKSRCSYCNFYSIGMKAD---DKFVKAFEKEIELKSCKYKNKICDTIY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +    +  I+  + +++ +S N EIT+E NP  +        RK G+NRIS+
Sbjct: 59  FGGGTPSTLSSTQVESIMRKLFQHFNISKNAEITMELNPCDMTKEYLASIRKIGINRISV 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+  +  L  +GR HNA +A  AI+ A+   F  +S DL+Y LP QT   ++  L  A
Sbjct: 119 GIQTNYDSLLLKIGRMHNAKQAEKAIYQAKKEGFSNISIDLMYELPMQTSKDFKNTLLWA 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   V H+S+Y L IE+GT F +++K G L  PSE  + ++Y     I   +G   YEIS
Sbjct: 179 VHLPVRHMSIYSLIIEEGTRFSQLYKKGLLNRPSEEASWEMYQSMCRILPHYGFERYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           + +  G +S HN+ YW+  DY+G+GP A SR+K         +      + K +    + 
Sbjct: 239 SFAQKGYKSEHNMKYWKLDDYLGLGPAACSRIKHERLENLPGV----RLYQKQLLSGENP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
             +   LS E++ +EF  + LR++EGI+ + +     +++     +    L+ +  ++  
Sbjct: 295 PEKIYKLSIEEEMEEFCFLQLRMKEGINKEKFAERYNKDIKEIYKDKIEMLKNKKLLKES 354

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
           +   +  T++G    + V     +
Sbjct: 355 EN-HIFLTEKGFAFGNYVFEQFLL 377


>gi|325290545|ref|YP_004266726.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965946|gb|ADY56725.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 393

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 120/394 (30%), Positives = 204/394 (51%), Gaps = 21/394 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN--------FIQSFLTEMQWMRQLTGPRSI 71
            +YVH PFCVKKCPYC F S        ++         +++    E+   RQ   P  +
Sbjct: 3   ALYVHVPFCVKKCPYCAFYSVALAPNGKEDKNRSVLIRKYLEGIRKEISLRRQ-DAPGGV 61

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQGYRKAGV 130
           SS+F GGGTPS+++   +  +L  I +         E TIE NP ++     Q  +  G+
Sbjct: 62  SSLFIGGGTPSVLDEGELKELLILIGEIAGRNDGRTERTIECNPGTINEKKAQILQAFGI 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ+L++  L+ +GR H   +   A+ + R      ++ DL++ LP QTM +W  
Sbjct: 122 NRVSLGVQALDDGFLKEIGRIHGVKQVEEAVKIIRGAGIDNLNLDLMFGLPGQTMEKWFE 181

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG-----DLVLPSENVAVDLYNLTQSITS 244
            L++A+++   HLSLY LT+E+ T F + +        ++ LP +++  D+Y     +  
Sbjct: 182 TLEKAIAFKPQHLSLYALTLEEETPFGREYGSDGAGKANVCLPDDDLQADMYEGAVELLE 241

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G   YEISN +  G E  HNL+YWR   Y+G+GPGA S +K    +   S++++  + 
Sbjct: 242 TAGYARYEISNFALPGYECRHNLSYWRGDQYLGLGPGAVSCLKGVRSKNIDSLDQYNLNL 301

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERN 361
            +   +   A  ++E+L+ EQ   EF+M+GLR  EGI+ + +     RN++    E    
Sbjct: 302 AEGYARQAQA-EDREYLTEEQMISEFMMLGLRTAEGIAFETFYGKFQRNIEDIYREFLAE 360

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             ++G++      RL+   +   + ++V+    +
Sbjct: 361 YMQKGYL-LADHGRLKLNPQYFFVANAVLTKFML 393


>gi|212703994|ref|ZP_03312122.1| hypothetical protein DESPIG_02047 [Desulfovibrio piger ATCC 29098]
 gi|212672587|gb|EEB33070.1| hypothetical protein DESPIG_02047 [Desulfovibrio piger ATCC 29098]
          Length = 388

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 195/384 (50%), Gaps = 16/384 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSISSIF 75
           VY+H PFC  +C YC F+S                +    L E+       G R + S+F
Sbjct: 3   VYIHVPFCRSRCRYCAFHSLPLGPASPDASPRVAAYRDHLLRELDLWATRLGRRPVESVF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGVNRIS 134
           FGGGTPSL+ P   A +L+ I +++ +++  EI++EANP S+       GY  AG+NRIS
Sbjct: 63  FGGGTPSLLPPDFQAAVLERIDRHFHLAAGAEISMEANPESLLARRAVDGYLAAGINRIS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS++++ L  LGR H  ++ + A+   R      +  DL++ LP Q    W   L+ 
Sbjct: 123 MGVQSMDDRFLSLLGRPHRRADVLRAVEHLRAAGCRNLGLDLMWGLPGQDAAHWLSTLED 182

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+   +H+S Y LT+E+GT   +    G L LP ++    +Y     + +AHGL  YEI
Sbjct: 183 ALALEPEHVSAYGLTLEEGTPLERDWSAGRLSLPEDDEQERMYLEGIRLLAAHGLEQYEI 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G  S HN+ YW   DY+G+GP A S ++        +       W   +   G 
Sbjct: 243 SNYARPGFFSRHNMGYWTGADYLGLGPAATSTLEG----RRWTDTPDQARWQADIDA-GR 297

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
              + E ++   + +E LM+ LR   G  + ++  L+GR+   +     R L   G   R
Sbjct: 298 PDHDAEAITPRIRLEERLMLSLRTCAGFGLAEYTSLSGRDFLADHGGWCRELVAAGL-AR 356

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           +   RL  T +G+ + ++V+A+L 
Sbjct: 357 LDGDRLALTPQGLLVSNAVVADLF 380


>gi|193214490|ref|YP_001995689.1| oxygen-independent coproporphyrinogen III oxidase [Chloroherpeton
           thalassium ATCC 35110]
 gi|193087967|gb|ACF13242.1| oxygen-independent coproporphyrinogen III oxidase [Chloroherpeton
           thalassium ATCC 35110]
          Length = 376

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 115/379 (30%), Positives = 187/379 (49%), Gaps = 9/379 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC ++C YCDF  +          F+     E+     L    +I +I+FGGG
Sbjct: 3   GLYFHIPFCRRRCHYCDF--YFTTNASLIGRFLVGLEAEIFHKATLFENETIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  +L     ++ ++   EIT+EANP  +     Q    + VNR+SLG+QS
Sbjct: 61  TPSLLSLAQIERVLALCFAHFRIAPAPEITLEANPEDLNEEKLQALASSPVNRLSLGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +   L+ L R H+A E+     LAR  F  ++ DL++  P +++  W+ EL+ AL +  
Sbjct: 121 FDAGKLKRLSRGHSAQESFEIASLARTFFRNINIDLMFGTPDESLNDWQRELETALQFQP 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y LT+E  TL       G +  P+E++ V+++          G   YE+SN +  
Sbjct: 181 EHLSTYSLTVEPKTLLAHDIGLGKIPAPNESLQVEMFLSVMRRLREAGYRHYEVSNFAKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            A S HN + W+   Y+G GP AHS V+ G      +  ++ +++L+      +A++ +E
Sbjct: 241 AALSAHNFDAWQRKPYLGFGPAAHSFVRQGRTERRFANVRNLKTYLE---NPANALLFEE 297

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQGFIERVQFSRL 376
            L+ +   +E + + LR   G+ +   E        NL  +       QG + R    RL
Sbjct: 298 TLTEKDILNEEIFLALRQDTGLGMDVLEKRRKFTRSNLLEKEIEAFCLQGLLRR-DSGRL 356

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R T +G T+ DS+     V
Sbjct: 357 RLTDKGFTLADSIAETFMV 375


>gi|116511983|ref|YP_809199.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107637|gb|ABJ72777.1| coproporphyrinogen III oxidase, anaerobic [Lactococcus lactis
           subsp. cremoris SK11]
          Length = 379

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC   C YCDF   +   +   + +I++ + E Q ++     + + +++ GGG
Sbjct: 7   SAYFHIPFCSHICYYCDFAKVLMTGQ-PVDAYIEAIIEEFQSLK----IKKLKTVYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q +  +L  IA    +    E T+EANP  +  +  +    + VNRISLGVQ+
Sbjct: 62  TPSVLSAQQLERLLTAIADQLDLDFLEEFTVEANPGDLSDDVIKVLAHSAVNRISLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR HN ++   +I       F  ++ DLIYALP QTM   + ++ + L+  
Sbjct: 122 FNNTLLKKIGRTHNEAQVYDSIERLKMAGFENITIDLIYALPGQTMEMVKSDVDKFLALD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H++LY L +E  T+F    + G L LPSE+   D+Y     I    G   YE+SN   
Sbjct: 182 LPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILEQQGYQHYEVSNFGR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW   +Y GIG GA   +    ++    +      +LK    +    V +
Sbjct: 242 PGFESKHNITYWDNEEYYGIGAGASGYLSGVRYKNYGPVH----HYLKAAANDKR--VNE 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E LS + Q +E + +GLR + G+ V+ +E     + D    E    L +Q  +      R
Sbjct: 296 EVLSKKSQIEEEMFLGLRKKSGVLVEKFEAKFNCSFDKLYGEQITELIKQKLL-YDDRER 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T +G  + ++V     +
Sbjct: 355 IHMTDKGFELGNNVFEKFLL 374


>gi|148989532|ref|ZP_01820891.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925075|gb|EDK76156.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Streptococcus pneumoniae SP6-BS73]
          Length = 351

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 182/340 (53%), Gaps = 11/340 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                 YVH PFC + C YCDF+    + +   +++++  L E +          +S+++
Sbjct: 3   KKPTSAYVHIPFCTQICYYCDFSKVFIKNQ-PVDSYLEHLLEEFRSY----DIEKLSTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    + ++L+G+ KN  +S   E+TIEANP  ++ +     + + VNR+SL
Sbjct: 58  IGGGTPTALSAPQLEVLLNGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSAVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +  + +A
Sbjct: 118 GVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVKENVAKA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+SLY L +E  T+F    + G L LP E +  +++    +     G   YEIS
Sbjct: 178 IGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERAGFEHYEIS 237

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V + G+A
Sbjct: 238 NFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAVEE-GNA 292

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            + ++ LS ++Q +E + +GLR + G+S+  +E   G++ 
Sbjct: 293 CITEDHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGQSF 332


>gi|197119870|ref|YP_002140297.1| oxygen-independent coproporphyrinogen III oxidase [Geobacter
           bemidjiensis Bem]
 gi|197089230|gb|ACH40501.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Geobacter bemidjiensis Bem]
          Length = 381

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 210/380 (55%), Gaps = 7/380 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGG 78
           G+Y+H+PFC+KKC YCDFNS           +++  L EM      L  P S  +++ GG
Sbjct: 4   GLYLHFPFCLKKCLYCDFNSTPATGD-DHREYVELLLKEMALRQAALPEPVSAPTLYLGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P+ + LI+     N+++  + E+T+EANP ++     QGYR AGVNR+SLG+Q
Sbjct: 63  GTPSLMAPELVGLIVAAARDNFSLEPDAEVTLEANPGTLTPERLQGYRMAGVNRLSLGIQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S E++ LR LGR H+++EA++A   AR   F  +S DL+++LP Q+++QW   L+ A+S 
Sbjct: 123 SFEDRLLRRLGRVHSSAEALSAFQDARRAGFDNISIDLMHSLPGQSLSQWREALELAVSL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y L+IE+GT F ++H++G L LPSE  A  ++  T  + SA G   YEISN++
Sbjct: 183 DPEHVSAYALSIEEGTPFERLHEEGALALPSEEEAAAMFEATSDVLSAAGYRHYEISNYA 242

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YW    Y+G G GAHS                  ++   +R       E
Sbjct: 243 KPGRHSRHNSAYWSRVSYLGFGAGAHSFWNPDGLGRRWKNPGDAAAYAAGIRAGLPVDEE 302

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFS 374
            E L+ E    E   +GLR+ +G+ +       G +      +    L+++G + R + S
Sbjct: 303 PEQLTLEDALSECFFLGLRMLDGLDLAPLSERYGESALAPHLKQVAALEKKGALTR-EGS 361

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  +   + + +S+ ++  
Sbjct: 362 RISISPGSVILANSIFSSFV 381


>gi|291538366|emb|CBL11477.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseburia intestinalis XB6B4]
          Length = 409

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 122/408 (29%), Positives = 205/408 (50%), Gaps = 30/408 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G   L +Y+H PFCV+KC YCDF S     +  Q  ++++   E+ +         +S++
Sbjct: 2   GKKELELYIHIPFCVRKCNYCDFLSFPA-DEDTQRQYVKALCKEISYYGAHCRDYVVSTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS +   ++A ILD I K++++    E++IE NP +V    F  YR++G+NRIS
Sbjct: 61  YIGGGTPSWLWESDMAAILDAIQKSFSLLPEAEVSIECNPGTVTAQKFAVYRQSGINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS +   L+ LGR H   + +    LAR   F  ++ DL+ +LP Q M  +   LQ+
Sbjct: 121 LGLQSAQNVELKMLGRIHTWEQFLKTYELARAGGFSNINVDLMSSLPGQHMESYADSLQK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV---------LPSENVAVDLYNLTQSITS 244
                 +H+S Y L IEKGT FY ++K   +          LP+E+   ++  LT  +  
Sbjct: 181 VCRLKPEHISAYSLIIEKGTPFYDLYKFDAVKQRAGMATDALPTEDEVYEMTQLTGQMLK 240

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES- 303
            +G   YE+SN +  G    HN+ YW   +Y+G+G GA S ++   +     +  + E  
Sbjct: 241 ENGYVHYEVSNFAQPGYACRHNIGYWTRVNYLGLGLGASSLMENIRYTNTRDLYTYLEQV 300

Query: 304 --WLKMVRKNGHAVVEKEFLSSE------------QQADEFLMMGLRLREGISVKDWEML 349
               + + +N H     E L++              Q +EF+ +GLR+ +G+S  D+   
Sbjct: 301 EVIREGIWENKHDDGTVEQLTATNLHASAESVGKYAQMEEFMYLGLRMIDGVSRDDFMHS 360

Query: 350 AGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            G  ++    E   +LQ +  +ER +  R+  T RG  + +  ++   
Sbjct: 361 FGMPIEAVYQEVLNHLQEEELLER-RAGRIYLTPRGQDVSNYALSQFL 407


>gi|86136762|ref|ZP_01055340.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
 gi|85826086|gb|EAQ46283.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
          Length = 330

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 153/331 (46%), Positives = 212/331 (64%), Gaps = 3/331 (0%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++S+FFGGGTPSL+ P+ +A +++G  + W  ++++EIT+EANP SVE   F GY
Sbjct: 1   MEGRVLNSVFFGGGTPSLMMPETVAAVIEGAREIWPFANDIEITLEANPGSVEAGRFAGY 60

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           R AGVNRIS+G+Q+L +  LR LGR H+ +EA AA  +ARN F R+SFDLIYA   Q + 
Sbjct: 61  RDAGVNRISMGIQALNDVDLRRLGRIHSVAEARAAFDIARNCFDRVSFDLIYARQGQDLA 120

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITS 244
            W+ EL  AL+ A+DHLSLYQLTIE+GT F   +  G L  LP+++ A D+Y  TQ I +
Sbjct: 121 HWKSELTEALTMAIDHLSLYQLTIEEGTAFGDRYARGKLRDLPTDDSAADMYQATQEICA 180

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           AHG+ AYEISNH+  G ES HN  YWRYGDY+GIGPGAH RV +   R A    + P +W
Sbjct: 181 AHGMPAYEISNHARPGEESRHNQIYWRYGDYVGIGPGAHGRVTLNGQRYATETHRAPGAW 240

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           LK V + G      + L  E  A E++MM +RL EG+ +  +  L+G+ L  +   +L  
Sbjct: 241 LKAVSE-GSGESLCQALPREDTAIEYMMMSMRLAEGMDITRYAALSGQELPQDRIADLVN 299

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G +       +R T +G  +L++V+  L V
Sbjct: 300 LGMVT-TSDQVIRATDQGRAVLNAVLRELLV 329


>gi|297569909|ref|YP_003691253.1| oxygen-independent coproporphyrinogen III oxidase [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925824|gb|ADH86634.1| oxygen-independent coproporphyrinogen III oxidase [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 379

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 184/381 (48%), Gaps = 13/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFG 77
           G+Y+H PFC  KC YC F+S   R       +  + L + + + +L     +  +++F G
Sbjct: 6   GIYLHIPFCRSKCSYCAFSSWPCRR--PPAGYPAALLAQARQLAELPWSQEKKFATLFVG 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++     +  +L G+ K + +    EI++EANP ++     +  R+ G NRIS+GV
Sbjct: 64  GGTPTIYPAPVLTDLLAGLGKLFRLDPEAEISLEANPDTLTPELLRQLRRGGFNRISIGV 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +Q L  +GR H+ ++A  A+  AR   F  ++ DL+Y LP Q+  QW  ++  AL 
Sbjct: 124 QSFHDQLLHRIGRRHDGAKARQAVAWARQAGFANLNLDLMYGLPGQSRRQWRADIATALE 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +HL++YQLT E  T   +    G LVLP  +++ +L    +    A G   YE++N+
Sbjct: 184 LQPEHLAIYQLTPEAETPLGRALAAGHLVLPEPDLSAELEQEARQALLAAGYQHYEVANY 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
              G    HNLNYW  G Y+G+G  A S +         +    P  + +++        
Sbjct: 244 CRPGRACRHNLNYWHNGSYLGLGAAAVSCLDGLRLVNVAA----PGRYRRLLAAGRAPYA 299

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQF 373
           E E L       E ++MGLRLR+G+ V   +                 L  QG +     
Sbjct: 300 EAELLGRPAAFRETVIMGLRLRQGLRVDQLQQRFALTPQQYYGPILDELIAQGLLV-ADR 358

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            R+  ++RG  + + V+  L 
Sbjct: 359 ERIALSERGFALANQVLCRLV 379


>gi|320352526|ref|YP_004193865.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobulbus
           propionicus DSM 2032]
 gi|320121028|gb|ADW16574.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobulbus
           propionicus DSM 2032]
          Length = 383

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 196/382 (51%), Gaps = 13/382 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFG 77
           G+Y+H PFC +KCPYC F S V +       ++++   +M+ +  +   +    +++FFG
Sbjct: 8   GIYLHVPFCRRKCPYCSFFSIVPQA-GDIRRYVETVRLQMRQLAAVPEIQALRFATVFFG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPSL+ P+ +A +L      +  +    EITIE NP +++    +   +AG NR+S+G
Sbjct: 67  GGTPSLLPPEALATLLADCRAVFPFATEQPEITIEVNPGTIDPTGLRQLNRAGCNRLSIG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QSL+++ L  LGR H A EA+A +  AR   F   S DL+Y LP QT+  W+  L+R L
Sbjct: 127 IQSLDDRELHQLGRIHTADEALAILAAAREAGFENCSADLMYGLPGQTVNSWQRGLERIL 186

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  +DH SLY+LT+E+ T F +        LP E+  + +          HGLH YEISN
Sbjct: 187 AAGIDHCSLYELTVEEHTPFARQLAQRQWTLPPEDEVLAMMTAIDRTVGRHGLHRYEISN 246

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G E  HN NYW+ G Y+G+GPGA             +      ++   +       
Sbjct: 247 YALPGLECAHNRNYWQNGWYLGLGPGAV----AAFGGQRRTAVADLAAYCHWIATGQTVW 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQ 372
              E L +E    E ++MGLRL  G+S+         +L          L  QG +  ++
Sbjct: 303 QTTERLDAEAAFRETVIMGLRLLAGVSISALAQRFAIHLPTYYGPTLSRLLDQGLV-ILE 361

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             RLR +  G+ + + V+A L 
Sbjct: 362 HDRLRLSPTGLPLANRVMAELV 383


>gi|158523028|ref|YP_001530898.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfococcus oleovorans Hxd3]
 gi|158511854|gb|ABW68821.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfococcus oleovorans Hxd3]
          Length = 393

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 125/388 (32%), Positives = 199/388 (51%), Gaps = 13/388 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T  G ++ G+Y+H PFC KKC YCDF S     ++   +F+++ L E+Q    L     +
Sbjct: 8   TYPGVDNTGLYLHIPFCAKKCRYCDFFSLAAPDRIF--SFVKALLREIQLSGPLVPGM-V 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTPSL+    + ++L  +  N+ +S++ EIT+E NP S         R+AGVN
Sbjct: 65  DTVYIGGGTPSLLSAAQVDVVLSTVRDNFRLSTDAEITMEVNPDSATPAWLAAVRQAGVN 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEME 190
           RI++G+QS ++  L FLGR H+A +A  A+    R  F  +  D+IYA+P QT    E +
Sbjct: 125 RINIGIQSFDDARLAFLGRIHSARQAEDALEASRRCGFDNIGADIIYAIPGQTRRDLEKD 184

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R LS++ DH+S Y LT E GT   +  ++ +     +  A DL++      +  G   
Sbjct: 185 LDRTLSFSPDHISCYMLTCEPGTPLARALENREFDPLPDRQAADLFDTVSRYLTGRGYLH 244

Query: 251 YEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           YEISN +      + HN  YWR   Y+G+GP AHS              +  +++ K ++
Sbjct: 245 YEISNFATSPDTMARHNTKYWRRVPYVGLGPSAHSYTGTHR----WWNHRDLDAYEKALQ 300

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QG 366
           +      E E L+  QQ  E + +GLR  +GI +  +E   G +      + L +   QG
Sbjct: 301 QGRPPRQEAETLTPAQQMLEAIYLGLRTADGILMAAFEAEFGVDFCACFAQPLAQCRDQG 360

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +   +  R   T+RGM   ++V A   
Sbjct: 361 LVVLSR-GRCMPTRRGMRFHETVTARFV 387


>gi|54295196|ref|YP_127611.1| hypothetical protein lpl2276 [Legionella pneumophila str. Lens]
 gi|53755028|emb|CAH16516.1| hypothetical protein lpl2276 [Legionella pneumophila str. Lens]
          Length = 375

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 204/380 (53%), Gaps = 11/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + +  +IQ+ + +++        R I+SIF G
Sbjct: 3   PLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +    + + + +    + N+EIT+EANP +VE + F  YR++G+NR+SLG+
Sbjct: 63  GGTPSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGI 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALS
Sbjct: 123 QSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSITQGLEDLKTALS 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +HLS YQLTIE  T+FYK        LPSE     L     ++    G H YEIS  
Sbjct: 183 YQPEHLSWYQLTIEPNTVFYK----HTPPLPSEEEDYLLEEQGFALLYNSGYHRYEISAF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L         + 
Sbjct: 239 SKPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLD---NEKPYLA 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
            +E ++ ++   EF++   RL + I ++ +    G   N  +   +   ++  I     +
Sbjct: 296 ARETITGKELLFEFMLNTTRLEQSIPLELFTTATGLELNQLLPLLKLANKKQLINLTD-T 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             + T  G    + + A   
Sbjct: 355 HWQVTPLGRQYTNDLQALFL 374


>gi|209522746|ref|ZP_03271304.1| oxygen-independent coproporphyrinogen III oxidase [Arthrospira
           maxima CS-328]
 gi|209496795|gb|EDZ97092.1| oxygen-independent coproporphyrinogen III oxidase [Arthrospira
           maxima CS-328]
          Length = 434

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 121/415 (29%), Positives = 192/415 (46%), Gaps = 43/415 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPR 69
                 YVH PFC ++C YCDF  S V   + G+     E ++    +E+   R    P 
Sbjct: 10  ETPTAAYVHIPFCRRRCYYCDFAVSVVGDRRHGENSGMMEEYVDFLRSEILNQRHFGPP- 68

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTPSL+  Q    ++  I+ N  ++S+ EI++E +P + ++   QG+  AG
Sbjct: 69  -LKTVFFGGGTPSLLSVQQFDRLIKTISDNLGIASDAEISVEMDPGTFDLGKLQGFVAAG 127

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
            NR+S+GVQ+ ++  LR  GR+H  ++   AI L   +     S DLI  LP QT    +
Sbjct: 128 ANRVSVGVQAFQDDLLRLCGRSHTVADIWRAIDLINQVGVVNFSIDLISGLPHQTPEMMQ 187

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L + LS    H+S Y L +E  T F + +K G+  LP +    +LY   Q   ++   
Sbjct: 188 ESLDQVLSINPAHVSHYDLIVEPQTAFGRYYKPGEFPLPDDQTTANLYRQAQKCLTS-RF 246

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN++  G E  HNL YW    Y G G GA S V  G +R+     +    + + +
Sbjct: 247 KHYEISNYARPGFECRHNLVYWHNQPYYGFGMGAASYV--GGYRLTRPRTRD--RYYQWL 302

Query: 309 RKNG-------------HAVVEKEFLS---SEQQADEFLMMGLRLREGISVKDWEMLAGR 352
           + +G              A    E ++         E LM+GLRL  G+ +   +   G+
Sbjct: 303 QSSGGVSESLQVFHSADLAPAPTEAIAIILGSDILLETLMLGLRLASGVDLVRLQQQFGQ 362

Query: 353 NLDIE---CERNLQRQGFIERVQFS---------RLRCT-QRGMTMLDSVIANLA 394
               +     + L  +G++E V             LR T   G    ++++A L 
Sbjct: 363 EAVSQITDILKPLGDRGWVEVVSTQEEPDQPATPHLRLTDPEGFLFSNTILAELF 417


>gi|52842564|ref|YP_096363.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629675|gb|AAU28416.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 375

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 202/380 (53%), Gaps = 11/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + +  +IQ+ + +++        R I+SIF G
Sbjct: 3   PLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +    + + + +    + N+EIT+EANP +VE + F  YR++G+NR+SLG+
Sbjct: 63  GGTPSLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGI 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALS
Sbjct: 123 QSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTALS 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +HLS YQLTIE  T+FYK        LPSE     L     ++    G H YEIS  
Sbjct: 183 YQPEHLSWYQLTIEPNTVFYK----HTPPLPSEEEDYLLEEQGFALLHNSGYHRYEISAF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L         + 
Sbjct: 239 SKPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLD---NEKPYLA 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
             E ++ ++   EF++   RL + I +  +    G   N  +   +   ++  I     +
Sbjct: 296 ACETITGKELLFEFMLNTTRLEQSIPLDLFTTTTGLELNQLLPLLKLANKKQLINLTD-T 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             + T  G    + + A   
Sbjct: 355 HWQVTPLGRQYTNDLQALFL 374


>gi|54298245|ref|YP_124614.1| hypothetical protein lpp2303 [Legionella pneumophila str. Paris]
 gi|53752030|emb|CAH13456.1| hypothetical protein lpp2303 [Legionella pneumophila str. Paris]
          Length = 375

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 123/380 (32%), Positives = 203/380 (53%), Gaps = 11/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + +  ++Q+ + +++        R I+SIF G
Sbjct: 3   PLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYVQALIEDLKTDISSYNTREINSIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +    + + +      + N+EIT+EANP +VE + F  YR++G+NR+SLG+
Sbjct: 63  GGTPSLFSAEAYNNLFNELKHMLPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGI 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALS
Sbjct: 123 QSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTALS 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +HLS YQLTIE  T+FYK        LPSE     L     ++    G + YEIS  
Sbjct: 183 YQPEHLSWYQLTIEPNTVFYK----HTPPLPSEEEDYLLEEQGFALLHNSGYNRYEISAF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L         + 
Sbjct: 239 SKPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLD---NEKPYLA 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
            +E ++ ++   EF++   RL + I ++ +    G   N  +   +   ++  I     +
Sbjct: 296 ARETITGKELLFEFMLNTTRLEQSIPLELFTTATGLELNQLLPLLKLANKKQLINLTD-T 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             + T  G    + + A   
Sbjct: 355 HWQVTPLGRQYTNDLQALFL 374


>gi|146299136|ref|YP_001193727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Flavobacterium johnsoniae UW101]
 gi|146153554|gb|ABQ04408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Flavobacterium johnsoniae UW101]
          Length = 384

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/384 (28%), Positives = 185/384 (48%), Gaps = 17/384 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR------QLTGPRSISS 73
           G+Y+H PFC + C YCDF  H       +++ + +   E+   +        +    + +
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSMKKKDDMVLALAKEIGMRKNELLDSARSDNEIVET 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTPS++    I  ++  + KN+ V  N EIT+EANP  + V       K+ +NR+
Sbjct: 61  IYFGGGTPSVLSNDEINFLISEVYKNYKVVENPEITLEANPDDLSVERILELSKSPINRL 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+G+QS  E+ L+ + R HN++EA   +  A   F  +S DLIY +P  +   W+  +Q 
Sbjct: 121 SIGIQSFYEEDLKMMNRAHNSAEAKKCLEEATKYFDNISLDLIYGIPGMSDEMWKQNIQT 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL + + H+S Y LT+E  T   K+ + G +  P +    + + +   +   +G   YE+
Sbjct: 181 ALDFGIPHISSYALTVEPKTALSKLIQTGKIAEPQDEATSNHFTILVEMLQKNGFVHYEL 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN       S +N  YW    YIGIGP AHS           +       +LK ++ +  
Sbjct: 241 SNFGKEDYFSKNNSAYWLGKKYIGIGPSAHSYDGEKRGWNIANNS----LYLKAIQNDEL 296

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
            + E E L+   + +E++M GLR   G+S+   E   G           Q+      +  
Sbjct: 297 PI-ETETLTISDRYNEYIMTGLRTIWGVSLNRIEQEFGSEYLNYLLEQSQKFLNDDLLS- 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           ++ + L+ T +G  + D + ++L 
Sbjct: 355 IENNILKPTLKGKFLTDGIASDLF 378


>gi|153870909|ref|ZP_02000207.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
 gi|152072622|gb|EDN69790.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
          Length = 322

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 118/319 (36%), Positives = 185/319 (57%), Gaps = 12/319 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + + ++I +   +++        R++ SIF G
Sbjct: 8   PLSLYIHIPWCVRKCPYCDFNSHEISEPMPESDYIAALFADLEQDLPRVWGRTVRSIFIG 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++ P++I  +L G+     V +N EIT+EANP +V+ + F G+RKAG+NR+SLG+
Sbjct: 68  GGTPSVLSPESIDDLLSGVRARIPVIANAEITLEANPGTVDSDRFNGFRKAGINRLSLGI 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  + +L+ LGR H   EA+ AI  A+   F  ++ DL++ LP QT+     +LQ A++
Sbjct: 128 QSFNDNALQSLGRIHGRKEALLAIEAAKQAGFQNINLDLMFGLPGQTLDAALEDLQTAVA 187

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +   H+S YQLTIE  TLFY         L  +++  D+    Q+  +A G + YEIS +
Sbjct: 188 FQPFHISWYQLTIEPNTLFYHQPP----ALSDDDLLWDMQTAGQTYLAAQGYYHYEISAY 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAH------SRVKVGSHRVAISIEKHPESWLKMVRK 310
           +    +  HNLNYW++GDY+GIG GAH      S++  G      S ++HP ++L+   +
Sbjct: 244 AKPAQQCQHNLNYWKFGDYLGIGAGAHAKITNTSKINFGLQITRFSKQRHPRTYLQS-AQ 302

Query: 311 NGHAVVEKEFLSSEQQADE 329
               V     L++      
Sbjct: 303 TPDVVASHTTLTAPDCVFR 321


>gi|300727903|ref|ZP_07061281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bryantii B14]
 gi|299774745|gb|EFI71359.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bryantii B14]
          Length = 386

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 113/385 (29%), Positives = 192/385 (49%), Gaps = 17/385 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFG 77
           G+Y+H PFC  +C YC F S        ++ +  +   EM+  +Q    R I   +I+FG
Sbjct: 3   GLYIHIPFCASRCIYCGFYSTTLSQL--KQKYTDAICREMELRKQNIDKRPIEISTIYFG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-----VSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           GGTPS +  + +  I   I   W      +  N EIT E NP  +  +        GVNR
Sbjct: 61  GGTPSQLSKEQLQQIFSSINSIWNCNGSIIRKNCEITFECNPDDITEDFANFIAYLGVNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G Q+ +   L+FL R HNA+E   A+   ++  F  +S DL++  P +T+T+WE ++
Sbjct: 121 VSMGAQTFDPARLKFLHRRHNANEVKLAVDRLKSAGFDNISIDLMFGFPGETLTEWEEDI 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+S    H+S Y L  E+GT  Y+M + G++    E  ++ +Y     + +  G   Y
Sbjct: 181 KTAVSLEPKHISAYSLMYEEGTPLYRMLEKGEIEEIDEETSLAMYKKLIDLLTQAGYEHY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G  S HN +YW    YIGIG  AHS  K            +   +++ +  N
Sbjct: 241 EISNFARPGFRSQHNSSYWNAIPYIGIGAAAHSYSKD----YRSWNVDNIHQYIQSIHDN 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER- 370
                E E+L +  + ++ +   LR REGI++   +   G  L +   +  Q+   +   
Sbjct: 297 KLP-SESEYLDATTRYNDLITTALRTREGINLTKLKDEYGEELFLYLTQEAQKYINLHEM 355

Query: 371 -VQFSRLRCTQRGMTMLDSVIANLA 394
            ++ ++L  T++G+ + DS++++L 
Sbjct: 356 KIEDNKLSLTRKGLYISDSIMSDLI 380


>gi|297617819|ref|YP_003702978.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145656|gb|ADI02413.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 378

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 122/388 (31%), Positives = 202/388 (52%), Gaps = 22/388 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFF 76
              +YVH PFCV+KC YCDF S V  ++     +++    E+ +  R L    ++ +++ 
Sbjct: 2   PASIYVHIPFCVRKCRYCDFYS-VSYHEELVARYVKCLCAEIEERARDLQQAEAVRTLYL 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++P  +A I+D I   + +    EIT+E NP +V +     YR AG+NR+SLG
Sbjct: 61  GGGTPSLLDPACVATIIDKIGSVFGILPEAEITLEVNPGTVNLKKMASYRHAGINRVSLG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS  +  L++LGR H+  +   A     +  F  +S DL+Y +P Q +++W   L  AL
Sbjct: 121 VQSFFDDILQWLGRLHSRQDVKTAFDVCLKAGFDNISIDLMYGVPGQDLSRWREGLDNAL 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    H+S Y L  E  T   +    G++ L SE   +  Y L   + +  G   YE+SN
Sbjct: 181 ALNPQHVSAYLLQPEADTPLGRSVAAGEVELLSEEEELAQYELAVDVLTGAGYRHYELSN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HNLNYW+ G Y+GIG GA S +K+  ++     + + +++++ +       
Sbjct: 241 FARPGYECCHNLNYWQGGQYLGIGAGAVSFLKLNRYQN----DPNVDAYIQSLSAATQPP 296

Query: 316 VEK-EFLSSEQQADEFLMMGLRLREGISVK--------DWEMLAGRNLDIECERNLQRQG 366
               E L+ E    + +++GLRL +GI V+        D+ +L G ++D      L   G
Sbjct: 297 RSVLECLNEEGIVRDRIVLGLRLMDGIDVEGLKRSYEVDFSLLFGSSVD-----RLIELG 351

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            I+R + S+L  +++G  + + V     
Sbjct: 352 LIKR-KGSKLCLSRKGYFLSNEVFREFL 378


>gi|148359895|ref|YP_001251102.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           pneumophila str. Corby]
 gi|296107946|ref|YP_003619647.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281668|gb|ABQ55756.1| (oxygen-independent) coproporphyrinogen III oxidase [Legionella
           pneumophila str. Corby]
 gi|295649848|gb|ADG25695.1| oxygen-independent coproporphyrinogen III oxidase [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 375

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 124/380 (32%), Positives = 204/380 (53%), Gaps = 11/380 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+C++KCPYCDFNSH     + +  ++Q+ + +++        R I+SIF G
Sbjct: 3   PLSLYIHIPWCIRKCPYCDFNSHKSPDVLPEHQYVQALIEDLKTDISSYNTREINSIFIG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL   +    + + + +  + + N+EIT+EANP +VE + F  YR++G+NR+SLG+
Sbjct: 63  GGTPSLFSAEAYNNLFNELKRMLSFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGI 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALS
Sbjct: 123 QSFNPNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSVTQGLQDLKTALS 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +HLS YQLTIE  T+FYK        LPSE     L     ++    G H YEIS  
Sbjct: 183 YQPEHLSWYQLTIEPNTVFYK----HTPPLPSEEEDYLLEEQGFALLHDSGYHRYEISAF 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L         + 
Sbjct: 239 SKPEKQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLD---NEKPYLA 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
            +E ++ ++   EF++   RL + I ++ +    G   N  +   +   ++  I      
Sbjct: 296 ARETITGKELLFEFMLNTTRLEQSIPLELFTTATGLELNQLLPLLKLANKKQLINLTDTD 355

Query: 375 RLRCTQRGMTMLDSVIANLA 394
             + T  G    + + A   
Sbjct: 356 -WQVTPLGRQYTNDLQALFL 374


>gi|299771722|ref|YP_003733748.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter sp.
           DR1]
 gi|298701810|gb|ADI92375.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter sp.
           DR1]
          Length = 364

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 129/372 (34%), Positives = 198/372 (53%), Gaps = 16/372 (4%)

Query: 30  KKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           +KCPYCDFNSH           ++ ++++ + + +   ++   R I S+F GGGTPSLI 
Sbjct: 2   RKCPYCDFNSHAVPDGALSSELEQTYLKALVADFETQLEMAQGRPIHSVFIGGGTPSLIS 61

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            Q    +   +          EIT+EANP +VE + F GY +AG+NR+S+GVQS +   L
Sbjct: 62  AQGYVWLFAELKSLLKFEDGCEITLEANPGTVEHDPFAGYLEAGINRLSIGVQSFDTDHL 121

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + LGR H+A+ AI AI  A+   F R++ DL++ LP+QT+ Q   +L+ A+     H+S 
Sbjct: 122 QKLGRIHSANNAIEAIQQAKQAGFKRVNVDLMHGLPEQTLEQALYDLKLAVESGATHISW 181

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           YQLTIE  T+F++       VLP + +  D+    ++   A+G   YE+S        S 
Sbjct: 182 YQLTIEPNTVFFR----TQPVLPQDEMLEDIQEQGEAYLKANGFINYEVSAWRKE-LPSA 236

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
           HNLNYW +GDY+ IG GAH +V            + P+ +L  V      + + E   +E
Sbjct: 237 HNLNYWEFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAEHLQMKKIE---AE 293

Query: 325 QQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRG 382
           +   EF+M  LRL +GI    +E   G +LD   E   +L+ +  +     SRL CT++G
Sbjct: 294 ELPFEFMMNALRLNDGIKADLYEQRTGLSLDHLNEVLTSLRARKLLVE-DSSRLACTEQG 352

Query: 383 MTMLDSVIANLA 394
              L+SV+    
Sbjct: 353 HIFLNSVLEEFL 364


>gi|240146447|ref|ZP_04745048.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseburia intestinalis L1-82]
 gi|257201420|gb|EEU99704.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Roseburia intestinalis L1-82]
          Length = 409

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 116/407 (28%), Positives = 204/407 (50%), Gaps = 30/407 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +Y+H PFCV+KC YCDF S     +  Q  ++++   E+ +         +S+++
Sbjct: 3   KKELELYIHIPFCVRKCNYCDFLSFPA-DEDTQRQYVKALCKEIFYYGAHCRDYVVSTVY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS +   ++A I+D + KN+ +  + E+++E NP +V    F  YR++G+NRISL
Sbjct: 62  IGGGTPSWLWESDMAEIMDAVHKNFALLPDAEVSVECNPGTVTAQKFAVYRQSGINRISL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS +   L+ LGR H   + +    LAR   F  ++ DL+ +LP Q    +   LQ+ 
Sbjct: 122 GLQSAQNVELKMLGRIHTWEQFLKTYELARAGGFSNINVDLMSSLPGQHTATYADSLQKV 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV---------LPSENVAVDLYNLTQSITSA 245
                +H+S Y L IEKGT FY ++K   +          LP+E+   ++  LT+ +   
Sbjct: 182 CRLKPEHISAYSLIIEKGTPFYDLYKFDAVKQRAGMATDALPTEDEVYEMTQLTEQMLKE 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES-- 303
           +G   YE+SN +  G    HN+ YW   +Y+G+G GA S ++   +     +  + E   
Sbjct: 242 NGYVHYEVSNFAQPGYACRHNIGYWTRVNYLGLGLGASSLMENIRYTNTRDLYTYLEQVE 301

Query: 304 -WLKMVRKNGHAVVEKEFLSSE------------QQADEFLMMGLRLREGISVKDWEMLA 350
              + + +N H     E L +              Q +EF+ +GLR+ +G+S  D+    
Sbjct: 302 VIREGIWENKHDDGTVEQLPATNLHASAESVGKYAQMEEFMYLGLRMIDGVSRDDFMHSF 361

Query: 351 GRNLDIECER---NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G  ++   ++   +LQ +  +ER +  R+  T +G  + +  ++   
Sbjct: 362 GMPIEAVYQKVLNHLQEEELLER-RAGRIYLTPKGQDVSNYALSQFL 407


>gi|21672795|ref|NP_660862.1| hypothetical protein BUsg532 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091668|sp|Q8K928|Y532_BUCAP RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein BUsg_532
 gi|21623444|gb|AAM68073.1| hypothetical 42.6 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 376

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 123/376 (32%), Positives = 205/376 (54%), Gaps = 13/376 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C+KKC YCDF S+V +  + ++ +I   L +++    L   R I+SIF G
Sbjct: 6   PISLYIHIPWCIKKCGYCDFYSYVNKSFIPEKEYIDHLLKDLEKDLSLIKEREINSIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++  +I  ++  I K   +S+  EITIEANP+++E   F  Y+K+G+NR S+GV
Sbjct: 66  GGTPSLLKSSSIKKMMREIKKRINISNTAEITIEANPTTLEYKRFFNYKKSGINRFSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+     L+ + R +N  EAI A+   + I    + D++Y LP Q++    ++LQ A+ Y
Sbjct: 126 QTFNSDLLKKIERTYNKREAILAVEEIKKINKNFNLDIMYGLPNQSLKDVLLDLQYAVKY 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLT+E  T FY       L LP+EN    +    +      G   YEIS+++
Sbjct: 186 NPTHISWYQLTLEPNTPFY----VKKLNLPNENNIFKMLVEGEKFLKQSGYKKYEISSYA 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
            L  E  HNLNYW +GDYIGIG  AH ++   +  +  +I+ K+   ++     NG  + 
Sbjct: 242 KLNYECQHNLNYWNFGDYIGIGCSAHGKITQINGDIIRTIKNKNINDFM-----NGKYLK 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA--GRNLDIECERNLQRQGFIERVQFS 374
            K F+  + +  E+ M   RL + +  + +E      +N   E  +    +G++ + +  
Sbjct: 297 HKNFVLKKDKPFEYFMNIFRLYKPVLKRQFEERTNINQNYIKEKIKKAIEKGYL-KNKID 355

Query: 375 RLRCTQRGMTMLDSVI 390
               T++G   L+S++
Sbjct: 356 FWDTTKKGKMFLNSLL 371


>gi|258651797|ref|YP_003200953.1| oxygen-independent coproporphyrinogen III oxidase [Nakamurella
           multipartita DSM 44233]
 gi|258555022|gb|ACV77964.1| oxygen-independent coproporphyrinogen III oxidase [Nakamurella
           multipartita DSM 44233]
          Length = 411

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 117/396 (29%), Positives = 187/396 (47%), Gaps = 19/396 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---FIQSFLTEMQWMRQ 64
           +    G    +L  YVH PFC  +C YCDFN++         +   ++ + L E++   +
Sbjct: 25  DQARQGAADRTLSFYVHVPFCATRCGYCDFNTYTAGELGSAASPQSWLDAALAEVELAAR 84

Query: 65  LTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           + G  R++S++F GGGTPSL+  + +  IL  I + + ++ + E++ EANP S +     
Sbjct: 85  VLGRGRTVSTVFVGGGTPSLVGAEPLTRILTAIDERFGLADDAEVSTEANPESTDPALLG 144

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQ 182
             R AG  R+SLG+QS   + L  L R H    A+  +  A +  F  ++ DLIY  P +
Sbjct: 145 ALRAAGFTRLSLGLQSTSRRVLTVLDRTHTPGRALDVVRWAGQEGFEHVNLDLIYGTPGE 204

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  ++   L   ++  VDH+S Y L +E GT   +    G L +P E+V  D Y L   +
Sbjct: 205 TDAEFTDSLAAVIASGVDHVSAYSLIVEPGTRLARQFDRGVLPMPDEDVLADRYLLADEL 264

Query: 243 TSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            +  GLH YE+SN +        HNL YW   D+ GIGPGAHS V      V     KHP
Sbjct: 265 LTGAGLHWYEVSNWARTPAGGCRHNLAYWTGQDWWGIGPGAHSHVGG----VRWWNVKHP 320

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-ER 360
            ++ + + +       +E L  + +          +   + ++D   L+G +       R
Sbjct: 321 AAYAQRLAEGRSPGQAREVLGPDDR------RLEDVLLRLRLRDGLALSGLSEQGRRHAR 374

Query: 361 NLQRQGFIERVQFSRLR--CTQRGMTMLDSVIANLA 394
                G ++     R R   T RG  + D +  +LA
Sbjct: 375 IAAADGSLDGAALDRGRAVLTLRGRLLADGIALSLA 410


>gi|73748660|ref|YP_307899.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. CBDB1]
 gi|73660376|emb|CAI82983.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. CBDB1]
          Length = 378

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 118/383 (30%), Positives = 188/383 (49%), Gaps = 12/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            NSL +Y+H+PFC+KKC YC F S+  + +   + ++     E++   +      + S++
Sbjct: 3   QNSLALYMHFPFCLKKCGYCSFISYPDKLESVPD-YVNCLKKEIKLRAE---GLCLHSLY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I+  I     +    EIT EANP ++ +   +     G+NR+SL
Sbjct: 59  FGGGTPSLLSPSQVADIMSSIQTISHLLPGTEITFEANPGTLSLPYLEQLSGLGINRLSL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR H+A +A      AR   F  ++ DLIY LP  T+  ++  L   
Sbjct: 119 GIQSFSDAELTMLGRLHDAQQARHIYKQARTAGFDNINLDLIYGLPHSTLLSFKANLSEM 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +H+SLY LT+E+ T  Y   + G L      +A D Y L + +  + G H YEIS
Sbjct: 179 LKLEPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLESAGYHHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW+   Y+G+G   HS  +       I ++++   W      +  +
Sbjct: 239 NWAKPGYESRHNLTYWQNRSYLGLGVAGHSFFQNWRTANTIDLDEYLLCWQ---NNSSPS 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERV 371
             E   +    Q  E +++GLRL +G++ +D E   G    ++     +     G +E  
Sbjct: 296 PSENINVDLANQLAETIILGLRLDKGVTAEDIEARFGTCVMDMYYPQIQECVELGLLEEH 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               +R T RG  + + V     
Sbjct: 356 D-GCIRLTPRGRLLSNEVFWRFL 377


>gi|228902842|ref|ZP_04066986.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 4222]
 gi|228856798|gb|EEN01314.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           thuringiensis IBL 4222]
          Length = 356

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 10/357 (2%)

Query: 44  YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN-WTV 102
            +   + ++     E+    Q     S+ +IF GGGTP+ +  +    +L+ I ++    
Sbjct: 4   ERQPVDQYLDYLEKEIINTVQRVPFDSMKTIFVGGGTPTALNMEQTKKLLEIINRHLRPF 63

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           + N E+T EANP  +         + GVNRIS GVQ+  ++ L  +GR H   +A  AI 
Sbjct: 64  APNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQTFRDELLEKIGRKHTREDAFLAIR 123

Query: 163 LARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            A+   F  ++ D+IYALP QT+   +  L  A +  V H S Y L +E  T+FY +   
Sbjct: 124 EAQEVGFKNINVDIIYALPGQTIEDVKETLDIAFTLGVQHFSAYSLIVEPKTVFYNLMNK 183

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           G L LP E+    +Y +       HG + YEISN S    +S HNL YW   +Y G G G
Sbjct: 184 GKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFSKGDNKSRHNLTYWNNEEYYGFGAG 243

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           AHS V     +         + +   + + G   ++   ++ +++ +E L +GLR  +G+
Sbjct: 244 AHSYVNGERIQNVGP----LKQYFNKIDETGFPYLDVHVVTEKEKMEEELFLGLRKTKGV 299

Query: 342 SVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           S   ++      +D    + L   Q QG +E      +R T++G  + + V  +  +
Sbjct: 300 SKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-GYVRLTRKGKLLGNEVFQSFLI 355


>gi|148653452|ref|YP_001280545.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Psychrobacter sp. PRwf-1]
 gi|148572536|gb|ABQ94595.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter sp.
           PRwf-1]
          Length = 418

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 127/424 (29%), Positives = 213/424 (50%), Gaps = 45/424 (10%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQEN---------FIQS 54
           +++       L +Y+H P+CVKKCPYCDFNSH       +    Q N         ++ +
Sbjct: 2   SSLIHVPDIPLALYIHIPWCVKKCPYCDFNSHALPSVDTKALGRQGNSIDSDLFALYVDA 61

Query: 55  FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
            + ++     L   R I SIF GGGTPSL+       + D + +   +S ++E+T+EANP
Sbjct: 62  LIKDIDAQLPLLQNRIIRSIFIGGGTPSLLPITQYRRLFDHLKQVLPMSDDIEVTMEANP 121

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
            ++E   F+ Y + G+NR+S+GVQS  +  L  LGR H+A++A +A   A+   F R++ 
Sbjct: 122 GTLEHAPFEQYLEVGINRLSMGVQSFSDSKLAALGRIHSANQAQSATQAAKKAGFKRINI 181

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++ LP+QT+ +   +++ A      H+S YQLTIE  T+FY+       +LP ++   
Sbjct: 182 DLMHGLPEQTLEEALYDIKMAHQAGATHISWYQLTIEPNTVFYR----DTPILPDDDRLA 237

Query: 234 DLYNLTQSITSAHGLHAYEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-- 290
           D+     ++ +  G   YE+S   S   + S HN+NYW++GDY+ IG GAH +V VG   
Sbjct: 238 DIEEQGSALLTELGYRNYEVSAWVSEADSGSRHNINYWQFGDYLAIGAGAHGKVTVGQQS 297

Query: 291 ------------------HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
                                  S  + P+ +L    +    +V    +++++ + EF++
Sbjct: 298 FDQPDIKEDIDALGITQPGIYRFSKTRLPKDYLNY--EEYPKMVGCAPIAADELSGEFML 355

Query: 333 MGLRLREGISVKDWEMLAGR-NLDIE-CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             LRL  G+ +  +    G   +DIE   R L++QG +   +   +  T  G   L+ V+
Sbjct: 356 NVLRLSLGVPLTLYTARTGLAAMDIEPIIRQLKQQGLLV-SKADWIEPTALGRRYLNQVL 414

Query: 391 ANLA 394
               
Sbjct: 415 QAFL 418


>gi|169334997|ref|ZP_02862190.1| hypothetical protein ANASTE_01403 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257735|gb|EDS71701.1| hypothetical protein ANASTE_01403 [Anaerofustis stercorihominis DSM
           17244]
          Length = 376

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 103/382 (26%), Positives = 199/382 (52%), Gaps = 11/382 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N++ +YVH PFC  KC YCDF S      +  E + +S   E+   +     R IS+++F
Sbjct: 2   NNISIYVHTPFCKHKCYYCDFASFANNEDLINEYY-KSLKKEIILRKDEINSREISTVYF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++ + I  I+D +   + ++ + EITIEANP S+     + Y+ AG NRIS+G
Sbjct: 61  GGGTPSYVDSKYIVDIMDILKSEFNINKDAEITIEANPESITDEKLENYKIAGFNRISMG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS    +L+ +GR H   + +++  L ++  F  ++ DL+++LP +T+  +   L+  +
Sbjct: 121 LQSANNDTLKKIGRIHTYEKFLSSYELCKSAGFDNINVDLMFSLPNETLNDFIDSLEEVI 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +  H+S Y L +E+GT  Y  ++  ++++  + +   +Y+   +    +    YEISN
Sbjct: 181 MISPSHISTYSLILEEGTKLYDNYRKNNIII-DDTLDRKMYHYCINKLKEYDYEQYEISN 239

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN++ W + DYIG G  A       ++ +  + + + + ++  +  +   +
Sbjct: 240 FAKKGYESRHNMSCWDFEDYIGFGSNASGF----NNNIRKTNKSNIKDYINDLNNDTLPI 295

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQ 372
           +EK  L+ +    E++M+GLR  +GI +         +      +   NL+    +  ++
Sbjct: 296 MEKTQLNIKDLIGEYIMLGLRKIKGIDIDKINKKFNIDFTDTYKDKIENLKNHNLVT-IE 354

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +  R T +G+   ++V+    
Sbjct: 355 DNHFRLTYKGLDFANTVMVEFI 376


>gi|115933434|ref|XP_798402.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115960126|ref|XP_001188042.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 440

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 150/397 (37%), Positives = 228/397 (57%), Gaps = 25/397 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN +V    + Q       + E Q + +L+G + ++SIFFGGG
Sbjct: 34  SLYVHWPYCQKRCTYCNFNKYVT-PTIDQNRIRACLVREAQTLIKLSGVKQVNSIFFGGG 92

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL EP+ +  +++ + +   + ++VEI++EANP+SVE+   + ++ AGVNR+SLG+Q+
Sbjct: 93  TPSLAEPRVLEGVIEAVKELVAMPTDVEISMEANPTSVEMKKLEDFKSAGVNRLSLGIQA 152

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L+   L+ LGR H   +++  IH AR +FP R+S D+I+  P QT+  WE EL++ L   
Sbjct: 153 LDSNDLKTLGREHTVGQSLTCIHEARKLFPDRLSIDIIFGRPSQTLNSWEAELEQILQVC 212

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLYQLT+E GTL YK  + G L +P  ++  D+Y       +  G H YE+SN + 
Sbjct: 213 DSHISLYQLTLEPGTLLYKFDQQGVLPMPDADLIADMYETAVERLAQAGFHRYEVSNFAR 272

Query: 259 L-GAESLHNLNYWRYGDYIGIGPGAHSRV---------------KVGSHRVAISIEKHPE 302
              AES+HN  YW    YIG+GPGAH R                K G  + A      P+
Sbjct: 273 TVRAESIHNKAYWEGKQYIGVGPGAHGRFVPITEQFADNADPSGKRGYSQEARIQTLEPD 332

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDI----- 356
           +W+  V K G A  ++  LS+     E L+ GLR R GIS + W+ L+ G  L       
Sbjct: 333 TWMLEVEKYGDATRKRIPLSNVDVLRELLLTGLRTRPGISDQTWQQLSPGDCLRDVFGSS 392

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +  ++ +  G +E      LRCT RG+ +LDS++ +L
Sbjct: 393 DFIKSARESGLMELDDAG-LRCTHRGLNVLDSLLPDL 428


>gi|163742616|ref|ZP_02150002.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
 gi|161384201|gb|EDQ08584.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
          Length = 337

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 156/338 (46%), Positives = 213/338 (63%), Gaps = 3/338 (0%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M         R +++IFFGGGTPSL+ P  +A I++   + W  S+++EI++EANP+SVE
Sbjct: 1   MLRAEPALSGRVLNTIFFGGGTPSLMHPDTVAAIIETAREIWPFSNDIEISLEANPTSVE 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
              F GYR AGVNRIS+G+Q+L +  L  LGR H+ SEA  A  +ARN F R+SFDLIYA
Sbjct: 61  AGRFTGYRDAGVNRISMGIQALNDGDLHRLGRMHSVSEAQKAFDVARNCFDRVSFDLIYA 120

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYN 237
              QT+  W+ EL +ALS A+DHLSLYQLTIE+GT F   +  G L  LPS++ A D+Y 
Sbjct: 121 RQGQTLVGWQQELDQALSMAIDHLSLYQLTIEEGTAFGDRYARGKLRDLPSDDNAADMYL 180

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            TQ I   HGL AYE+SNH+  GAES HNL YWRYGDY+GIGPGAH R+ +   R A   
Sbjct: 181 ATQEICDKHGLPAYEVSNHARPGAESRHNLIYWRYGDYLGIGPGAHGRLTLDGTRYATET 240

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
              P +WL    ++      +  L+ E  + E+LMMG+RL EG+ +  +  ++GR L  E
Sbjct: 241 YLQPGAWLAA-AEDHTGECSRIPLTPEDASAEYLMMGMRLVEGLDLDRFCAISGRTLSSE 299

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              +L   G +E     R++ T  G  +L++V+ +L V
Sbjct: 300 RISHLCEIGMVELSDK-RIQATDAGRAVLNAVLRDLLV 336


>gi|327265063|ref|XP_003217328.1| PREDICTED: MYCBP-associated protein-like [Anolis carolinensis]
          Length = 1025

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 141/380 (37%), Positives = 220/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+HWP+C K+C YC+FN ++ R  + +       + E + + Q +  + I+S++FGGG
Sbjct: 94  ALYLHWPYCEKRCSYCNFNKYIPRN-IDESRMRNCLIQEARTLIQFSQVQRITSVYFGGG 152

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  IA +LD I+++  V+   EIT+EANP+S +      ++KAGVNR+S+G+QS
Sbjct: 153 TPSLASPLTIAAVLDAISRDVFVAEGTEITLEANPTSADALCLAEFQKAGVNRLSVGIQS 212

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L +  L+ LGRNH+A EA+  +  A+ +FP R+S DLI+ LP QT   W  +L+  L+  
Sbjct: 213 LNDAELQLLGRNHSAYEALRTLEEAKKLFPGRISVDLIFGLPDQTTASWVQDLEALLAMC 272

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQLT+E+GT  +K    G L LP  ++  ++Y   ++I    G H YE+SN + 
Sbjct: 273 DDHISLYQLTLERGTSLFKQVHQGFLPLPDPDIVSEMYECARNILQNAGFHQYEVSNFAR 332

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HNL+YWR   YIG+GPGAH R         +R A      P+ W+K V   GH 
Sbjct: 333 NGALSTHNLSYWRGSQYIGVGPGAHGRFVPWGNGKVYREARIQTLEPDIWMKEVLAFGHG 392

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L+  +  +E LM+GLR+  GI+ + W             G++ +++    L+  
Sbjct: 393 TRKQTPLTRLEILEEVLMLGLRMDVGITHQHWLQFAPDLNLWDVFGQSEEVQ---ELEAH 449

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G +       LRC+ +G+ +
Sbjct: 450 GLMILDDRG-LRCSWKGLAV 468


>gi|126663030|ref|ZP_01734028.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteria bacterium BAL38]
 gi|126624688|gb|EAZ95378.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Flavobacteria bacterium BAL38]
          Length = 407

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 118/409 (28%), Positives = 202/409 (49%), Gaps = 40/409 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--------PRSI 71
           G+Y+H PFC + C YCDF  H       ++  + +   E++   + T            I
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTNLKKKDEMVLALAKEIEMRSKNTSITHHPSSITEPI 60

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN---------- 121
            +I+FGGGTPS++E  ++  ++D + KN+ V  N EIT+EANP  +  +           
Sbjct: 61  ETIYFGGGTPSILEISDLKFLIDAVYKNFKVVENPEITVEANPDDLNFDFAQYDKEVDLS 120

Query: 122 --------FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
                   F+  +  GVNR+S+G+QS  E  L+ + R HN  EA   + +A   F  +S 
Sbjct: 121 VRAESRTIFEELQTIGVNRLSIGIQSFFEDDLKLMNRAHNVEEAKKCLEIATQYFDNISI 180

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLIY +P+ +  +W   ++ ALS+ V H+S Y LT+E  T  +   + G +  P++ VA 
Sbjct: 181 DLIYGVPQMSNEKWLQNIETALSFGVPHISSYALTVEPKTALHSFIQKGIIPQPNDEVAQ 240

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
           + +++     S +G   YE+SN       S +N +YW    YIGIGP AHS       + 
Sbjct: 241 EHFDILVDKLSENGFIHYELSNFGKENYFSKNNSSYWLGKKYIGIGPSAHSY----DGKN 296

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                 +   ++K +++N   + E E L+   + +E++M GLR   G+S++  E   G+ 
Sbjct: 297 RGWNVSNNSLYIKSIQENKLPI-EIETLTKTDRYNEYIMTGLRTIWGVSLERIEKEFGKT 355

Query: 354 LDIECERNLQR---QGFIERVQFSR----LRCTQRGMTMLDSVIANLAV 395
                    ++   Q  +E V+ S     L+ T++G  + D + ++L +
Sbjct: 356 YLDYLLMQSKKYFDQELLECVKLSEVETILKTTKKGKFLSDGIASDLFL 404


>gi|330998694|ref|ZP_08322423.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parasutterella excrementihominis YIT 11859]
 gi|329576433|gb|EGG57945.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parasutterella excrementihominis YIT 11859]
          Length = 351

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 6/354 (1%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           R    +  +  + +  ++        R + SIFFGGGTPSL+ P+ I  I++    N   
Sbjct: 2   RGPAPEALYEAAIIEGLKEQGARVQRRKLKSIFFGGGTPSLMAPETIGRIIEAADNNIPF 61

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
             N+EIT+EANP + E   F+ +R+AGVNR+S+G+QS ++  LR LGR HN+ EA  A  
Sbjct: 62  HENIEITLEANPGTFEEQKFKDFREAGVNRLSIGIQSFDDAKLRALGRVHNSQEARRAAE 121

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            A  IF   + DL++ LP QT+ + + EL+ A S+   HLS YQLT+E  T F K     
Sbjct: 122 SAGKIFENFNLDLMFGLPGQTIQELDEELETAFSFGSTHLSCYQLTLEPNTYFAKFPPK- 180

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
              +P ++V  D+ +L +  T+A G   YE+S ++  G    HNLNYW +GDY  +GPGA
Sbjct: 181 --GIPDDDVLSDMSDLVRDKTAARGFDHYEVSAYAKGGYRCRHNLNYWEFGDYFAVGPGA 238

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           H ++ +          + P  WL   +++   + E++ +  E    EF++  LRLREG+ 
Sbjct: 239 HGKITIQGRPERFYNYRDPARWLLSFKEHQTQIAERKLIDPEDLPFEFMLNALRLREGVP 298

Query: 343 VKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +    G + D+       L+ +G +      R++ T++G   L+ V+    
Sbjct: 299 FDFYTERTGLDFDVIESIWTELREKGLV-CDHLKRIKTTEKGWLFLNEVLEAFL 351


>gi|298373609|ref|ZP_06983598.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274661|gb|EFI16213.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 373

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 108/378 (28%), Positives = 190/378 (50%), Gaps = 12/378 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C YC F S    Y   ++ ++     E++  +       + S++FGGGT
Sbjct: 2   LYIHIPFCKSRCVYCSFFSST--YLELKKQYVSLLCREIETRKDYLDTNVLKSVYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL++  +++ I + I K + ++   E+TIE N   V+ +  +  R    NR+S+G+QS 
Sbjct: 60  PSLLDFDDLSRIYESINKCFILAPGAEVTIECNADDVDSDFVKTIRCFPFNRVSVGIQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++ LRFL R H++ +A  ++ + ++  F  +S DL+Y+LP QT   W   +  ALS  +
Sbjct: 120 DDRELRFLNRRHDSRQAKDSVKMLQDNGFSNISVDLMYSLPNQTAESWNRTISEALSLDI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L  EKGT    M + G +   +E  ++  + + ++     G   YEISN +  
Sbjct: 180 QHISAYSLMYEKGTKLRSMLESGQITAVAEEDSLLFFKILRNELLDKGFEHYEISNFALP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              ++HN  YW    YIG+G  AHS   V        I     ++ + V + G    E+E
Sbjct: 240 DFYAVHNSGYWNGEKYIGVGASAHSYNGVSRQWNVADI----AAYCQAVDR-GETYFEQE 294

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRL 376
            L+   + +EF+ + LR  +GI +   E L G  +   C        +   +  V   R+
Sbjct: 295 QLTVTDRYNEFMFLSLRTAKGIDLCRLERLFGGGMLKYCMVNADKFLKNNLLTIVDN-RM 353

Query: 377 RCTQRGMTMLDSVIANLA 394
             T+ G+ + D ++++L 
Sbjct: 354 YLTEEGIFVSDGIMSSLI 371


>gi|328867221|gb|EGG15604.1| hypothetical protein DFA_10446 [Dictyostelium fasciculatum]
          Length = 470

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 230/420 (54%), Gaps = 39/420 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----- 68
           Q  + + +Y+HWP+C K C YC FN ++    V      QS +TE+  + +L  P     
Sbjct: 52  QREHPISIYIHWPYCSKICGYCSFNKYLDGPHVDHSRMKQSMITELSNLIKLYYPSSSSI 111

Query: 69  -----RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS---NVEITIEANPSSVEVN 120
                  + SI+FGGGTPSL     ++ I++ + + +  ++   ++EI +EANP +++ N
Sbjct: 112 NNNIQYKLKSIYFGGGTPSLATIDTLSSIVETVYQYFPTTTNRKDLEINLEANPDAMDKN 171

Query: 121 NFQGYRKA-GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
             +  +   GVNR+SLGVQ+L ++ L+FLGR HN  +AI +I +  +IF R+SFD+IYA 
Sbjct: 172 YLKDLKDIVGVNRLSLGVQALNDEDLKFLGRTHNTKQAIESIEICNSIFDRVSFDMIYAR 231

Query: 180 PKQ-TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDL 235
             Q ++ QW  EL+ A+  +  HLSLY LT E GT F+K    H+   ++ P+ +     
Sbjct: 232 RGQHSVEQWRQELKLAVQLSKGHLSLYNLTFEDGTAFFKRLRKHRSNHIIKPTNDQCSLH 291

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH---- 291
           Y      T   G++ YEISN S  G  S HNLNYWR GDYIGIGPGA SRV V ++    
Sbjct: 292 YMAAIEETEKVGMNQYEISNFSIPGHHSQHNLNYWRGGDYIGIGPGACSRVSVFNNNNQQ 351

Query: 292 --------RVAISIEKHPESWLKMVRKNGHAVVEKE--FLSSEQQADEFLMMGLRLREGI 341
                   +VA+    HP++W+  V  NGH + E E   LS + + +E L+MGLR +EG+
Sbjct: 352 DNTNLKPEKVALKTIIHPKTWMDRVEANGHGLFEAETTTLSFKDRINELLLMGLRTKEGV 411

Query: 342 SVKDWEML-----AGRNLDIECERNLQRQGFIERVQFSRLRC-TQRGMTMLDSVIANLAV 395
           S   +  L       + LD      LQ  G I   +   LR  T     +LD+++ ++ +
Sbjct: 412 SRSTFRYLSHGLDFEQVLDPIVLSRLQSIGMIVLDENG-LRVTTNEAFMILDTLLLDICL 470


>gi|300775209|ref|ZP_07085071.1| coproporphyrinogen dehydrogenase [Chryseobacterium gleum ATCC
           35910]
 gi|300505949|gb|EFK37085.1| coproporphyrinogen dehydrogenase [Chryseobacterium gleum ATCC
           35910]
          Length = 374

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 194/379 (51%), Gaps = 11/379 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC+F  H       ++  +++  TE+   +     +++ S++FGGGT
Sbjct: 2   IYIHIPFCKQKCSYCNF--HFSTSLNFKDEMLRAMKTEILLRKDELQNKNLKSLYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++    I+ ++D   + ++   ++EIT+EANP  ++ N  +      VNR+S+G QS 
Sbjct: 60  PSILSVDEISSLIDETLRYFSFEKDIEITLEANPDDLDKNFLKQLAGTPVNRLSIGTQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ + R HNASEA ++I  A++  F  +S DLIY  P   +  W+  L + ++  V
Sbjct: 120 FEEDLKLMNRAHNASEAESSIKRAQDFGFENLSIDLIYGSPTSNLEIWKENLNKTIALEV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T        G +  P E      +         HG   YE+SN +  
Sbjct: 180 PHISSYALTVEPKTALENWIAKGKVKSPKEEEQNKEFYYLSDFLKDHGFEHYEVSNFAKP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HN +YW+Y +Y+GIGP AHS        V      + + ++K +  +     E+E
Sbjct: 240 GFYSRHNSSYWKYQEYLGIGPSAHSYNGFD---VRSWNVANNQQYIKKLN-DKLLAKEEE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRL 376
            LS E Q +E +M+GLR   G+ ++  +      L    +  ++   ++G I  ++   L
Sbjct: 296 ILSMEDQFNEMIMIGLRTIWGVDIESLKTKFSDRLLEHFQTEIKPKMQEG-ILIIENDHL 354

Query: 377 RCTQRGMTMLDSVIANLAV 395
           +  ++   M D + ++L +
Sbjct: 355 KIPEKHWFMADGIASDLFI 373


>gi|300933257|ref|ZP_07148513.1| coproporphyrinogen III oxidase [Corynebacterium resistens DSM
           45100]
          Length = 433

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/430 (28%), Positives = 192/430 (44%), Gaps = 58/430 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG--------------QENFIQSFLTEMQWMRQL 65
           G+Y+H PFC  +C YCDFN++  +                   + ++ +   E++    L
Sbjct: 5   GLYIHVPFCATRCGYCDFNTYTPQELADDSASTLNSAARGNTIDGYLDALERELELAVSL 64

Query: 66  TGPRS-------ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             PRS       + ++FFGGGTPS++  + +   L  I + + +++  E+T E+NP S  
Sbjct: 65  WEPRSKEEGGSAVDTVFFGGGTPSMLGAEGLTRALRAIKRTFGLTAGAEVTTESNPESTN 124

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIY 177
              F   R+ G  RISLG+QS     L+ L R H       AA       F  ++ DLIY
Sbjct: 125 PEFFAALREEGFTRISLGMQSAAGHVLKVLERQHTPGRSVAAAREALAAGFDHVNLDLIY 184

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T       L+  +S  VDH+S Y L +E GT   +  + G+L  P E+V  D Y 
Sbjct: 185 GTPTETDADLLKSLEAVVSAGVDHVSAYSLIVEDGTAMARKVRRGELPAPDEDVLADRYR 244

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG-------- 289
           +     +  G   YE+SN +  G E  HNL YWR G + G GPGAH  V++         
Sbjct: 245 MIDQFLTDAGFEWYEVSNWAKPGGECRHNLVYWRSGQWWGAGPGAHGCVRLRTSAELVAA 304

Query: 290 -----------------SHRVAISIEKHPESWLKMVRKNG-------HAVVEKEFLSSEQ 325
                            S    +   K P ++ + +   G        +VV  E LS   
Sbjct: 305 DSRVMGTQVSGGAGGEFSGLTRLVNAKRPATYWQGLMGRGGVKPEIPASVVTLEQLSRAD 364

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
            A E +M+GLRLREG+ +      A  +   E  +  QR G    V+ ++L  T  G  +
Sbjct: 365 VATERVMLGLRLREGLDLGVLRQTAELD---EVLKRYQRLGL-ANVEGTKLMLTDEGRYL 420

Query: 386 LDSVIANLAV 395
            D ++ ++ +
Sbjct: 421 ADGIVTDIVL 430


>gi|242373888|ref|ZP_04819462.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348442|gb|EES40044.1| coproporphyrinogen dehydrogenase [Staphylococcus epidermidis
           M23864:W1]
          Length = 382

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 110/380 (28%), Positives = 192/380 (50%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + ++ + + EM    Q+   R + +++ GGG
Sbjct: 13  SAYIHIPFCVRICTYCDFNKYFI-DKQPVDEYLDALIKEM----QVNNNRQLQTMYVGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T+S   E + EANP  +        ++ GVNRIS+GVQ+
Sbjct: 68  TPTALNLTQLEKLLKAINNTFTISG--EYSFEANPDELTYEKVALLKRYGVNRISMGVQT 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR H   +   A+  AR +    +S DL+Y LP+QT+  ++  L+ AL   
Sbjct: 126 FKPELLEILGRTHKTEDIYKAVDNARKVGIESISLDLMYHLPQQTLDDFKQSLELALKMD 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  ++Y           L  YEISN   
Sbjct: 186 IDHISSYGLILEPKTQFYNMYRKGHLKLPNEDLGAEMYQYLMQRLEQSNLKQYEISNFGK 245

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G ES HN  YW   +Y G G GA   V    +     +      ++  + KN   ++ +
Sbjct: 246 IGHESTHNKVYWLNEEYYGFGAGASGYVDGVRYTNLNPV----RHYIDAINKNEQPILTQ 301

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              + E++ +E + +GLR+ +G++ + ++   G  ++    +   NL  +  +++ Q   
Sbjct: 302 TEPTFEEKMEEEMFLGLRMNQGVNTERFKYKFGLPIESVFGQTIENLLGRNLLQK-QQQN 360

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 361 ISLTERGKVIGNEVFEAFLL 380


>gi|78189762|ref|YP_380100.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium chlorochromatii CaD3]
 gi|78171961|gb|ABB29057.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium chlorochromatii CaD3]
          Length = 374

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 117/378 (30%), Positives = 177/378 (46%), Gaps = 6/378 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SL +Y+H PFC ++CPYCDF       +V  E F  +   E  +        +IS+I  G
Sbjct: 2   SLSLYLHIPFCRERCPYCDFYLITGTGQV--EPFFAALARETAFRADELQGATISAIHIG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    ++  L+ +A   T +  +E+ +EANP  +        +  GVNR+S+GV
Sbjct: 60  GGTPSLVPVAMLSRWLEQLACYATFAPTMELALEANPEDITPALLDELQSLGVNRLSIGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   Q L  LGR H+A++A+    +A   F  +S DL+  LP +T+  WE +L  AL+ 
Sbjct: 120 QSFSIQKLTVLGRKHSATDALRVTEMALERFASVSLDLMCGLPHETLAVWEGDLSTALAL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS+Y L+IE  T F+ +   G+L  P E      Y          G   YE+SN  
Sbjct: 180 QPHHLSVYMLSIEPKTRFHWLVARGELPAPMEAEQALFYETAIHTIKLQGYQHYEVSNFC 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S +NL  W    Y+G G  AHS +   +  +  +  +    +L       +AV  
Sbjct: 240 LPNFHSRYNLASWERKPYLGFGAAAHSFIVQQNREIRQANIESLSRYLAHPE---NAVAF 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L   ++  E L + LRL  G+S   +   A R++        Q QG++      R  
Sbjct: 297 REELGCNERFTEELFLTLRLNRGLSRSFFSRTASRDVVETLFATFQEQGWMYE-DNERFY 355

Query: 378 CTQRGMTMLDSVIANLAV 395
            T+RG    D +   L  
Sbjct: 356 LTERGFLFADYIAEELLA 373


>gi|325297201|ref|YP_004257118.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           salanitronis DSM 18170]
 gi|324316754|gb|ADY34645.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           salanitronis DSM 18170]
          Length = 377

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 191/380 (50%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC ++C YCDF S  +  +   + +I++   E++  +       I +++ GGG
Sbjct: 3   GIYLHIPFCKRRCIYCDFFSTTQSGQT--DRYIEALCAELEQRKDYLEDEEIETVYMGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ ++   + D +  ++++  + EITIEANP  +     +  R    NR+S+G+Q+
Sbjct: 61  TPSQLQEKHFEALFDTLYHHYSIRPDAEITIEANPDDLHPTYIRMLRHFPFNRLSMGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + +L  L R HNA +A+ A    R   F  +S DL+Y LP +T+  W+ +L++A++  
Sbjct: 121 FNDATLSVLQRRHNARQALEAFWNCREAGFGNISIDLMYGLPGETLATWQADLKQAVTLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L  E+GT  +K+ +   +    E+++V+L++         G   YEISN   
Sbjct: 181 PEHISAYHLIYEEGTPLWKLREQHRVNEIDEDLSVNLFSELIHTLKNAGYEHYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HN +YW    Y+G G  AHS           S+EK+         +N     EK
Sbjct: 241 PDKYSRHNSSYWTGKTYLGCGASAHSYNGTSRQWNIASLEKYITGI-----ENHKPDFEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER----NLQRQGFIERVQFS 374
           E L    + ++F++  LR   G+S+   +   G  L   C      +LQ+     +    
Sbjct: 296 EELDLYTRYNDFIITSLRTMWGMSLTRLKTGFGEKLYDYCIHLATPHLQQHTL--QQTNG 353

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L+ T +G+ + D ++++L 
Sbjct: 354 FLKLTGQGIFISDGIMSDLL 373


>gi|291458007|ref|ZP_06597397.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291419339|gb|EFE93058.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 408

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 122/383 (31%), Positives = 197/383 (51%), Gaps = 8/383 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC +KC YCDF S     +     +I     E+    +      ISS+F GG
Sbjct: 24  LELYLHIPFCARKCSYCDFLSFSVNARE-HAPYIGKLCQELSLFSKAASDYEISSVFIGG 82

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++P  I  +L  I +++ +  + EITIE NP+S     F  Y ++G+NR+S+G+Q
Sbjct: 83  GTPSVLDPHFIEALLQTIREHYHLRDDAEITIEVNPASTLRYKFASYLRSGINRLSIGLQ 142

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   + L  LGR H   + +     AR   F  +S DL+  +P QT   W   L+  +  
Sbjct: 143 SANNEELHRLGRIHIFEDFLKCYQGARLEGFQNISIDLMKNIPGQTPASWRKSLKNVIML 202

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +HLSLY L +E+GT FY++ + G+L LP E++  ++  + + +T  HG   YEISN++
Sbjct: 203 KPEHLSLYDLIVEEGTPFYELDRKGELELPDEDMEEEIDEIAKELTEKHGYSRYEISNYA 262

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HN  YW    Y+G G GA S  +         +  +    L+   + G   + 
Sbjct: 263 RPGYFCRHNYGYWSNIPYLGFGLGASSCFEGSRWHNLRDLSDYLTLDLRKDAEAGCPKLR 322

Query: 318 KEF--LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQ 372
           +E+  LS   + +EFL +GLR   G+S  D+      +L        +   RQG + + +
Sbjct: 323 EEYKKLSRRDEINEFLFLGLRRTAGVSEIDFVSRFSVDLFSIFGPSLKRFLRQGLLVK-E 381

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +RL  T+RGM + + +++ L +
Sbjct: 382 NARLYFTERGMMISNMLLSQLLL 404


>gi|218441365|ref|YP_002379694.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 7424]
 gi|218174093|gb|ACK72826.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7424]
          Length = 435

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 122/404 (30%), Positives = 197/404 (48%), Gaps = 31/404 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSI 71
               Y+H PFC ++C YCDF   V   K         +N+++    E+     L  P  +
Sbjct: 25  PRSAYIHIPFCRRRCYYCDFPISVLGNKTDINTSAMIKNYVEVLCQEICATPALGQP--L 82

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+    +  IL  +++++ ++S  EI++E +P +   +  QGY +AGVN
Sbjct: 83  ETVFFGGGTPSLLPVPYLKQILTVLSQHFGITSEAEISLEIDPGTFTEDQLQGYLQAGVN 142

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQS +++ L+  GR H   +   A+ + R +  P  S DLI  LP QT+ QW+  
Sbjct: 143 RVSLGVQSFDDRLLQICGRFHTQKDIFTAVDVIRRLEVPNFSLDLISGLPHQTLEQWQYS 202

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +A+  A +HLS Y L +E  T F K ++ G+  LPS+ +   +Y   Q   +  G + 
Sbjct: 203 LTQAIIIAPNHLSCYDLVLEPVTAFGKFYQPGEKPLPSDEMTAKMYRTAQQFLTQAGFNH 262

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN+   G +  HN  YW    Y G G GA S V +       +  ++     +++  
Sbjct: 263 YEVSNYGQPGYQCRHNRVYWENRAYYGFGMGAASYVNLQRFTRPKTRREYYTWVEQLIDS 322

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGF 367
            G   ++     S  Q  E LM+GLRL EG+ +       G  +     ++L    RQG+
Sbjct: 323 QGK--IDCSPTPSGDQLLETLMLGLRLAEGVDLSVLTQQYGEAILNAICQSLSPYSRQGW 380

Query: 368 IERVQFS----------------RLRCT-QRGMTMLDSVIANLA 394
           IE +                   R+R T   G    +++++ L 
Sbjct: 381 IEGIDQQGKKLDFKDINDFYRLKRIRLTDPDGFLFSNTILSTLF 424


>gi|311087926|gb|ADP68005.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 207/380 (54%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF G
Sbjct: 6   PISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLKDFERDLSLINNRNINTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+
Sbjct: 66  GGTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTIEYQNFIQYKNSGINRFSLGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+  
Sbjct: 126 QTFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQC 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S
Sbjct: 186 NPSHISWYQLTIEPNTVFYAK----KIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
               +  HNLNYW +GDYIGIG G+H ++   +  +  +I+ K+   +L     +G  + 
Sbjct: 242 KFNYQCQHNLNYWNFGDYIGIGCGSHGKITQKNGEIIRTIKNKNINDFL-----SGKYIN 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
               +S   +  E+ M   RL + I  K +        +   +  +   ++GF+   Q  
Sbjct: 297 SVYQVSKRDKIFEYFMNVFRLYKPIFKKHFRENTNIEESFIEKNIQIAIQEGFL-INQSD 355

Query: 375 RLRCTQRGMTMLDSVIANLA 394
               T++G   L+S++    
Sbjct: 356 CWHTTKKGKNFLNSLLEIFL 375


>gi|313676641|ref|YP_004054637.1| oxygen-independent coproporphyrinogen iii oxidase [Marivirga
           tractuosa DSM 4126]
 gi|312943339|gb|ADR22529.1| oxygen-independent coproporphyrinogen III oxidase [Marivirga
           tractuosa DSM 4126]
          Length = 376

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   +++   E++  +       + SI+FGGG
Sbjct: 3   GIYIHIPFCKQACFYCDF--HFSTNMAIKNEMVEAICKEIELQQDYLKGELVESIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++   ++  I   + K+  +SS  EIT EANP  +  +      + G+NR+S+G+QS
Sbjct: 61  TPSVLNEGHLKSIFTKLNKHHRISSEAEITFEANPDDITSSKLDELFQNGINRLSVGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E  L+++ R HN+ +A   +       F   S DLIY +P  +   WE +L+  + + 
Sbjct: 121 FDEDVLKWMNRAHNSKQAFQCLEWINESEFNNFSLDLIYGIPISSHETWEKDLRTLVDFQ 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y LTIE  T+F +  + G L   SE+ A + +              YE+SN   
Sbjct: 181 PPHISSYCLTIEPDTVFGRWKQKGKLNEASEDYASEQFYHLAEYLRKANYEHYEVSNFGK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW+   Y+GIGP AHS           +  K    +L  ++ N     E 
Sbjct: 241 AGFHSKHNSSYWQQKPYLGIGPAAHSYDGKNRQFNISNNAK----YLSAIQTNEIP-AEL 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           + L++E + +E+LM  LR   G ++         +L    +  +++    G    ++   
Sbjct: 296 DLLTAEDRINEYLMTSLRTSIGCNLSFLINELQYDLLKNAKPQIEQWKSSGLC-ILEDDY 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L+ T +G  + D + ++L +
Sbjct: 355 LKLTLKGRLLADKLASDLFL 374


>gi|289432686|ref|YP_003462559.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. GT]
 gi|288946406|gb|ADC74103.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. GT]
          Length = 378

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 188/383 (49%), Gaps = 12/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            NSL +Y+H+PFC+KKC YC F S+  + +   + ++     E++   +      + S++
Sbjct: 3   QNSLALYMHFPFCLKKCGYCSFISYPDKLESVPD-YVNCLKKEIKLRAE---GLCLHSLY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I+  I     +    EIT EANP ++ +   +     G+NR+SL
Sbjct: 59  FGGGTPSLLSPSQVADIMSSIQTVSHLLPGTEITFEANPGTLSLPYLEQLSGLGINRLSL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR H+A +A      AR   F  ++ DLIY LP  T+  ++  L   
Sbjct: 119 GIQSFSDAELTMLGRLHDAQQARHIYKQARTAGFDNINLDLIYGLPHSTLLSFKANLSEM 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +H+SLY LT+E+ T  Y   + G L      +A D Y L + +  + G H YEIS
Sbjct: 179 LKLEPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLESAGYHHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW+   Y+G+G   HS  +       I ++++   W      +  A
Sbjct: 239 NWAKQGYESHHNLTYWQNRPYLGLGVAGHSFFQNWRTANTIDLDEYLLCWQ---NNSTQA 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERV 371
             E   +    Q  E +++GLRL +G+S +D E   G    ++     +     G +E  
Sbjct: 296 PSENINVDLANQLAETIILGLRLDKGVSAEDIEARFGTCVMDMYYPQIQECVELGLLEEH 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               +R T RG  + + V     
Sbjct: 356 D-GCIRLTPRGRLLSNEVFWRFL 377


>gi|88801304|ref|ZP_01116832.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaribacter irgensii 23-P]
 gi|88781962|gb|EAR13139.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Polaribacter irgensii 23-P]
          Length = 376

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 191/379 (50%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +E  + S + E++  ++      I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACFYCDF--HFSTSLKKKEEMLVSLVREIKLRKEELKGAIIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  ++  +  N+ V  N EIT+EANP  +         K+ +NR+S+GVQS
Sbjct: 61  TPSVLSTEEIRGLIAAVYLNFEVIENPEITLEANPDDLSEEKLIALSKSPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + R HNA+EA  ++ LA   F  +S DLIY +P  T  +W   ++ ALS+ +
Sbjct: 121 FFEKDLKLMNRAHNAAEAKKSLALATRYFDNISLDLIYGIPGCTNEEWRTNIKTALSFGI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +E  T    M + G +    +      + +     +  G   YE+S+    
Sbjct: 181 PHISSYALVVEPYTALKTMIEKGKIKNVDDTKTQQQFQILTKELATAGFIHYELSSFGKE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G    +N  YW    Y+GIGP AHS           +  K    ++K +++N   ++E+E
Sbjct: 241 GFFGKNNSAYWFGVAYLGIGPSAHSFDGKQRSWNVKNNVK----YIKAIQENAL-LIERE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSR 375
            LS   + +EF+M GLR   G+S+   +   G       E++ ++   IE     V+   
Sbjct: 296 TLSLTDRYNEFVMTGLRTMWGVSLDKIKDKFGEKYLNYLEKHSKKH--IEEALLFVENGT 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L+  ++G  ++D + A+L 
Sbjct: 354 LKTRKKGWFLVDGIAADLF 372


>gi|311086271|gb|ADP66353.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086846|gb|ADP66927.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087435|gb|ADP67515.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 207/380 (54%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF G
Sbjct: 6   PISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLRDFERDLSLINNRNINTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+
Sbjct: 66  GGTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTIEYQNFIQYKNSGINRFSLGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+  
Sbjct: 126 QTFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQC 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S
Sbjct: 186 NPSHISWYQLTIEPNTVFYAK----KIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
               +  HNLNYW +GDYIGIG G+H ++   +  +  +I+ K+   +L     +G  + 
Sbjct: 242 KFNYQCQHNLNYWNFGDYIGIGCGSHGKITQKNGEIIRTIKNKNINDFL-----SGKYIN 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
               +S   +  E+ M   RL + I  K +        +   +  +   ++GF+   Q  
Sbjct: 297 SVYQVSKRDKIFEYFMNVFRLYKPIFKKHFRENTNIEESFIEKNIQIAIQEGFL-INQSD 355

Query: 375 RLRCTQRGMTMLDSVIANLA 394
               T++G   L+S++    
Sbjct: 356 CWHTTKKGKNFLNSLLEIFL 375


>gi|223044366|ref|ZP_03614400.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus capitis SK14]
 gi|222442235|gb|EEE48346.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus capitis SK14]
          Length = 374

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 194/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + ++ + + EM    Q+   R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-DKQPVDEYLDALIKEM----QVENNRKLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I  N T + + E + EANP  +        +K GVNRIS+GVQ+
Sbjct: 60  TPTALNIVQLEKLLKAI--NNTFTIHGEYSFEANPDELTYEKVALLKKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR H  ++  +A++ AR      +S DL+Y LP+Q++  ++  L+ AL   
Sbjct: 118 FKPELLEILGRTHKTNDIYSAVNNARKAGINSISLDLMYHLPQQSLEDFKQSLELALEMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  D+Y           L+ YEISN   
Sbjct: 178 IDHISSYGLILEPKTQFYNMYRKGHLKLPNEDLGADMYQYLMKRLEDSNLNQYEISNFGK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K +  N   ++ K
Sbjct: 238 KGHESTHNKVYWLNEEYYGFGAGASGYVDGVRYTNLNPVN----HYIKAIYNNEEPILTK 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              + E++ +E + +GLR+ +G+S+  ++   G N++    +   +L  +  +E  +   
Sbjct: 294 NTPTFEERMEEEMFLGLRMNQGVSISRFKRKFGINIEEVFGQTITDLISRNLLEN-KCGY 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|331084612|ref|ZP_08333700.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330410706|gb|EGG90128.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 404

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 122/410 (29%), Positives = 204/410 (49%), Gaps = 37/410 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +Y+H PFC+KKC YCDF S     +   + ++ + + E++  ++L     +++IF
Sbjct: 2   KRELELYIHIPFCMKKCAYCDFLSGPAPRET-IDRYVTALVAEIRQYQKLAENYRVTTIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS++    +  I D +   + + ++ EIT+EANP +V   N Q YR  G+NRIS 
Sbjct: 61  FGGGTPSILSGGRMKEIFDALRDVFEIQADAEITMEANPGTVTKENLQAYRACGINRISF 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS++++ L+ LGR H   +   +  LAR   F  ++ DLI A+P QT+  WE  L   
Sbjct: 121 GLQSVDDKELKLLGRVHTMRQFEESYDLARKAGFQNINIDLISAIPGQTVESWEHTLDTV 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH-------------------------KDGDLVLPSE 229
           +    +H+S Y L IE+GTLFY+++                               LP E
Sbjct: 181 IRMNPEHISAYSLIIEEGTLFYEIYGENAKEEQDSQCEKCLADDGKQMDTGKNFPKLPDE 240

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
                +Y LT     A G   YE+SN++  G    HN  YW+  +Y+GIG GA S ++  
Sbjct: 241 EAERRMYELTAEKLEAAGYLQYEVSNYAKPGYACRHNKGYWQRVEYLGIGTGAASLIENE 300

Query: 290 SHRVAISIEKHPES--WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            ++     + +  +   L  + +      EKE L    Q +E + +GLR++EG++ + + 
Sbjct: 301 RYQHISDTDLYIRANGRLDQIEE------EKETLDWNAQVEETMFLGLRMKEGVNKQKFR 354

Query: 348 MLAGRNLDIECERNLQRQG--FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               R +       L++     + R +  R+  T+RG  + + V+A   +
Sbjct: 355 ERYHREIQEVYGEVLEKLKEEGLLREEEERICLTKRGNDLSNYVLAQFLL 404


>gi|314933756|ref|ZP_07841121.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus caprae C87]
 gi|313653906|gb|EFS17663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus caprae C87]
          Length = 374

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 194/380 (51%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + ++ + + EM    Q+   R + +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-DKQPVDEYLDALIKEM----QVENNRKLETMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I  N T + + E + EANP  +        +K GVNRIS+GVQ+
Sbjct: 60  TPTALNIVQLEKLLKAI--NNTFTIHGEYSFEANPDELTYEKVALLKKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR H  ++  +A++ AR      +S DL+Y LP+Q++  ++  L+ AL   
Sbjct: 118 FKPELLEILGRTHKTNDIYSAVNNARKAGINSISLDLMYHLPQQSLEDFKQSLELALEMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  D+Y           L+ YEISN   
Sbjct: 178 IDHISSYGLILEPKTQFYNMYRKGHLKLPNEDLGADMYQYLMKRLEDSNLNQYEISNFGK 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K +  N   ++ K
Sbjct: 238 KGHESTHNKVYWLNEEYYGFGAGASGYVDGVRYTNLNPVN----HYIKAIYNNEEPILTK 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
              + E++ +E + +GLR+ +G+S+  ++   G N++    +   +L  +  +E  +   
Sbjct: 294 NTPTFEERMEEEMFLGLRMNQGVSISRFKRKFGINIEEVFGQTITDLINRNLLEN-KCGY 352

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T+RG  + + V     +
Sbjct: 353 ISLTERGKVIGNEVFEAFLL 372


>gi|15617143|ref|NP_240356.1| hypothetical protein BU550 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681895|ref|YP_002468281.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471600|ref|ZP_05635599.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387311|sp|P57615|Y550_BUCAI RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein BU550
 gi|25284552|pir||B84994 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039208|dbj|BAB13242.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219624738|gb|ACL30893.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 207/380 (54%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF G
Sbjct: 6   PISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLRDFERDLSLINNRNINTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+
Sbjct: 66  GGTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTLEYQNFIQYKNSGINRFSLGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+  
Sbjct: 126 QTFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQC 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S
Sbjct: 186 NPSHISWYQLTIEPNTVFYAK----KIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
               +  HNLNYW +GDYIGIG G+H ++   +  +  +I+ K+   +L     +G  + 
Sbjct: 242 KFNYQCQHNLNYWNFGDYIGIGCGSHGKITQKNGEIIRTIKNKNINDFL-----SGKYIN 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
               +S   +  E+ M   RL + I  K +        +   +  +   ++GF+   Q  
Sbjct: 297 SVYQVSKRDKIFEYFMNVFRLYKPIFKKHFRENTNIEESFIEKNIQIAIQEGFL-INQSD 355

Query: 375 RLRCTQRGMTMLDSVIANLA 394
               T++G   L+S++    
Sbjct: 356 CWHTTKKGKNFLNSLLEIFL 375


>gi|219682450|ref|YP_002468834.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622183|gb|ACL30339.1| predicted oxidoreductase (YggW) [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 376

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 207/380 (54%), Gaps = 13/380 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C+KKC YCDF S+V +  + +  +I+  L + +    L   R+I++IF G
Sbjct: 6   PISLYIHIPWCLKKCGYCDFYSYVSKEIIPENKYIEHLLRDFERDLSLINNRNINTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++  +I  +L+GI K   +S N+EI+IEANP ++E  NF  Y+ +G+NR SLG+
Sbjct: 66  GGTPSLLKNTSIKNLLNGIKKRKIISKNIEISIEANPKTIEYQNFIQYKNSGINRFSLGI 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+   + L+ + R +N+ +A+ AI  ++ I   ++ DL+Y LP Q++ +   +LQ A+  
Sbjct: 126 QTFNSKMLKKIERTYNSKDAMNAIIESKKISDNINLDLMYGLPGQSLEEALSDLQIAIQC 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S YQLTIE  T+FY       +  P ++V  ++      +    G   YEIS++S
Sbjct: 186 NPSHISWYQLTIEPNTVFYAK----KIQTPHQDVVFNMLIEGDKLLKKAGYKKYEISSYS 241

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
               +  HNLNYW +GDYIGIG G+H ++   +  +  +I+ K+   +L     +G  + 
Sbjct: 242 KFNYQCQHNLNYWNFGDYIGIGCGSHGKITQKNGEIIRTIKNKNINDFL-----SGKYIN 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFS 374
               +S   +  E+ M   RL + I  K +        +   +  +   ++GF+   Q  
Sbjct: 297 SVYQVSKRDKIFEYFMNVFRLYKPIFKKHFRENTHIEESFIEKNIQIAIQEGFL-INQSD 355

Query: 375 RLRCTQRGMTMLDSVIANLA 394
               T++G   L+S++    
Sbjct: 356 CWHTTKKGKNFLNSLLEIFL 375


>gi|108758188|ref|YP_629403.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Myxococcus xanthus DK 1622]
 gi|108462068|gb|ABF87253.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Myxococcus xanthus DK 1622]
          Length = 401

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 139/397 (35%), Positives = 213/397 (53%), Gaps = 14/397 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--- 65
           + +TG  +   G+Y+H+P+C+ KCPYCDF   V R +V +E + ++ L E+         
Sbjct: 8   DALTGMPAARFGLYLHFPYCLAKCPYCDFAVAVAR-QVPEERYARAVLAELDTRLAAEPS 66

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              + + SIF GGGTPSL  P+ +A +LDGIA    V+  VE+++E NP   +   F GY
Sbjct: 67  LAGKVLDSIFLGGGTPSLWHPRYVAQVLDGIAARLRVAPGVEVSLEGNPERADAERFAGY 126

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTM 184
           R AGVNR+SLGVQS + ++L+ LGR H+A+    A+  AR   FP ++ D IY +  QT+
Sbjct: 127 RAAGVNRLSLGVQSFQPETLKALGRAHDAAMVEGAVDAARSAAFPVVAMDFIYGVHGQTV 186

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIE-----KGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            Q E + +RA++ A +HLS Y LT+E     + T   K  K G+L LP ++  VD+  + 
Sbjct: 187 AQVEADARRAVALAPEHLSTYALTVERDVLAEDTPLSKRLKRGELELPPDDTVVDMARVV 246

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           + +  A GLH YE+SNH+  G  S HN  YW  G+Y+ +G GA   +        +++ +
Sbjct: 247 REVYGAAGLHRYEVSNHARPGFSSRHNALYWTGGEYLALGVGATGMLLSPQPHRYVNL-R 305

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             E +L            +E L  E+   E L MGLRL  G+  +      G+ ++    
Sbjct: 306 SAERYLVEAEAGRLPEEGREPLGPEELFAERLAMGLRLVSGVDWEAVCERYGQPVEPRRA 365

Query: 360 R--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               L   GF   ++  RL  T++G  +  +V A L 
Sbjct: 366 EVARLVAHGF-ATLRDGRLALTEKGADVHSAVCARLL 401


>gi|254511341|ref|ZP_05123408.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacteraceae bacterium KLH11]
 gi|221535052|gb|EEE38040.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodobacteraceae bacterium KLH11]
          Length = 336

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 159/337 (47%), Positives = 209/337 (62%), Gaps = 3/337 (0%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M+     T  R +++IFFGGGTPSL+ P+ +A I+D     W  ++++EIT+EANP SVE
Sbjct: 1   MKRAAAETPDRVLNTIFFGGGTPSLMAPETVAAIIDEARALWHPANDMEITLEANPGSVE 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
              F  Y  AGVNRIS+GVQ+L +  LR LGR H  +EA AA  +A + F R+SFDLIYA
Sbjct: 61  AGRFAAYGDAGVNRISMGVQALNDDDLRRLGRIHTVAEARAAFDIAHSCFDRVSFDLIYA 120

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYN 237
              QT+  W  EL  AL+ AVDHLSLYQLTIE GT F   +  G L  LP ++ A D+Y 
Sbjct: 121 RQHQTLDTWRAELTEALAMAVDHLSLYQLTIEDGTAFGDRYALGKLRGLPEDDSAADMYL 180

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            TQ I  AHGL AYE+SNH+  GAES HNL YWRYGDY+GIGPGAH R+ +  H+ A   
Sbjct: 181 ATQEICDAHGLPAYEVSNHARPGAESQHNLIYWRYGDYVGIGPGAHGRLTLNGHKYATET 240

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
              P +WL  V + G     +  L+ + Q  E+LMM +RL EG+ +  + +L+GR L   
Sbjct: 241 YLSPNTWLTAVAQ-GQGESSRTRLNRQDQGAEYLMMCMRLDEGLDIDRYMILSGRELPQR 299

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +L   G I  +  +RLR T  G  +L++VI  L 
Sbjct: 300 NLNSLVDLGMIT-LDENRLRATSNGRAVLNAVIRELL 335


>gi|149182768|ref|ZP_01861232.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
 gi|148849534|gb|EDL63720.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
          Length = 355

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 8/352 (2%)

Query: 47  GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN- 105
             + ++     EMQ          +S+IF GGGTP+ ++   + ++   I +N   S   
Sbjct: 5   PVDEYLNFLKKEMQMQLDKYPSDKLSTIFVGGGTPTALDASQLEVLCQSINENLPYSPEE 64

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           VE T EANP  +  +  +   + GVNR+S GVQS  ++ L+ +GRNH + +   +I  A+
Sbjct: 65  VEFTFEANPGDLTSDKLEVLHQHGVNRLSFGVQSFNDELLKRIGRNHRSKDVYTSIEAAK 124

Query: 166 NI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
              F  +S DLIYALP QT+  ++  L+ AL + + H S Y L IE  T+FY + + G L
Sbjct: 125 KAGFENISIDLIYALPGQTVADFKDTLKTALEFDLPHYSSYSLIIEPKTVFYNLMRKGKL 184

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            LP +    ++Y++        G++ YEISN +  G ES HNL YW   +Y G G GAH 
Sbjct: 185 SLPPQEAEAEMYSVLMEEMETAGINQYEISNFAKKGYESRHNLVYWNNDEYYGFGAGAHG 244

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
             K   +     ++K    +++ + +    V+E    +  ++ +E + +GLR  EG+SV 
Sbjct: 245 YAKGNRYANFGPLKK----YMEPLAEGHLPVIESHEQTKSEKMEEEMFLGLRKTEGVSVA 300

Query: 345 DWEMLAGRNLDIECERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +    G +     +  ++   Q  +  V+ S +R TQ+G  + + V     
Sbjct: 301 RFTEKFGESPFSVFKEAIEEMTQKELLIVEDSYIRLTQKGRFLGNEVFQAFL 352


>gi|160946316|ref|ZP_02093525.1| hypothetical protein PEPMIC_00276 [Parvimonas micra ATCC 33270]
 gi|158447432|gb|EDP24427.1| hypothetical protein PEPMIC_00276 [Parvimonas micra ATCC 33270]
          Length = 379

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 116/377 (30%), Positives = 197/377 (52%), Gaps = 11/377 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFC + C YCDF +  +      + ++++   E++          I SIF GG
Sbjct: 4   LGLYIHIPFCDRICNYCDF-TAFQGANSKIKEYVEALKKEIELKGN--KNFLIDSIFIGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS I+ + I  IL+ + +N+TV  N+EI+IE NP + +    + Y+ A +NR+S+GVQ
Sbjct: 61  GTPSFIDGKYIFEILEKVKENFTVLDNIEISIETNPKTFDKRKLEYYKSAKINRVSIGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  +  L+ LGRNHN+ EA  +I L +     ++ DLI+    QT+     +L+   +  
Sbjct: 121 SFNDVILKELGRNHNSKEAFDSIELVKKFDFDINLDLIFGYQSQTIEDILYDLEMVKNIN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L IE+ T F  +   G L    E     +Y+L        G++ YE+SN + 
Sbjct: 181 PEHISYYALIIEEKTKFKALQNAGKLDFLDEETERKMYHLIVEKLEEMGMNQYEVSNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G ES+HN  YW   +Y+G+G  AHS +        +++ K    ++K +      V  +
Sbjct: 241 VGKESVHNKKYWNCKEYLGLGISAHSYLNDERFSNTVNLSK----YIKELYNGNIPVDFR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQFSR 375
           E L    +  E+++M +RL+EG  + D+  L   +   E ++   + G    +  ++  R
Sbjct: 297 EKLDMPTKKFEYIIMNMRLKEGFLISDYNRLFESDFLEENKKA-VKIGLENNVVEIKDDR 355

Query: 376 LRCTQRGMTMLDSVIAN 392
           +  T+RG  ++DS   N
Sbjct: 356 IYFTKRGFDIMDSFFVN 372


>gi|284037726|ref|YP_003387656.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
 gi|283817019|gb|ADB38857.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
          Length = 374

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 192/381 (50%), Gaps = 13/381 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC + C YCDF  H       +   + +  TE+   +     +++ +I+FGG
Sbjct: 1   MHLYLHIPFCKQACHYCDF--HFSTSLGQKSALVDALCTEIALQKSYLPDQALETIYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +A +   I  +++VS   EIT+EANP  ++    Q  R+  VNR+S+G+Q
Sbjct: 59  GTPSLLTEAELAQVFTAIHAHFSVSPTAEITLEANPDDLDSGKLQMLRRY-VNRLSIGIQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +E SLR++ R H A+EA   + LAR   F  MS DLIY +P +    W+++LQ+ L+ 
Sbjct: 118 TFDETSLRWMNRAHTATEAEVCVGLARQAGFENMSVDLIYGIPNRDNQAWQLDLQKILAL 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y LTIE  T F +  K G L    E+ A   +    S  +  G   YEISN +
Sbjct: 178 NVPHLSAYALTIEPDTAFGRWQKKGKLPPADEDTAAGQFEELTSALTTAGYAHYEISNFA 237

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + HN  YW+   Y+GIGP AHS           +  +    ++  + +       
Sbjct: 238 RDGQYARHNTAYWQRRPYLGIGPSAHSYNGHSRQYNLANNVR----YIAAIAQGKLP-AT 292

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
            E L+   Q +E+L+ GLR + G S+ + + +   +      R+L      G++ R    
Sbjct: 293 LEELTVADQVNEYLLTGLRTQWGCSLTELDTMLAGDFSTMQARDLAAMYKTGWLVR-HGD 351

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            L  TQ G    D V A+L V
Sbjct: 352 TLLLTQPGKLFADRVAASLFV 372


>gi|313884880|ref|ZP_07818632.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619571|gb|EFR31008.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 376

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 111/376 (29%), Positives = 194/376 (51%), Gaps = 10/376 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + ++G+YVH PFC K C YCDF +   +  V    ++   + EMQ  +       + +I+
Sbjct: 2   AETIGLYVHIPFCQKLCHYCDFLTFEDQDDV-IPQYVDYLIKEMQLYQD--RDYILDTIY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +E   +A I+DGI   + V+ + E++IE NP SV     + Y+  G NR S+
Sbjct: 59  FGGGTPSHLEADLMAKIMDGIYATFKVTDDCEVSIEMNPESVTEEKIKTYQAKGFNRFSM 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS + + L+ +GR H+   AI   HL R++    +S DL++  P+Q M     ++ +A
Sbjct: 119 GVQSFDPKVLQIMGRLHSRQTAIDKFHLLRDLGCDNVSIDLMFNNPRQDMDILNRDIDQA 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    +H+S Y L I+  T F +  K G + L  E    D+Y+  Q   S  G + YEIS
Sbjct: 179 IELNPNHISYYSLMIKDNTNFQRWLKAGRIKLFDEKTDRDMYHNIQDRLSQAGFNQYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           + +  G ES HN  YW+  +Y+G+G GA S + +       +  +  + +   + +    
Sbjct: 239 SFARDGKESRHNKKYWQLENYLGVGMGASSNIDL----RRFTNTRRFKDYFAAIDQGQMP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQ 372
           V   E +  E++  EF+M+ +RLR+G  +       G +   + +  L++  +  + +++
Sbjct: 295 VESSEMMDLEEREKEFIMLNMRLRKGFDISVINQRFGIDFKEKYKDALEKHLKYKVIQIE 354

Query: 373 FSRLRCTQRGMTMLDS 388
              +  T  G+ + + 
Sbjct: 355 GDHIYFTDYGLDVGNQ 370


>gi|323141064|ref|ZP_08075969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414440|gb|EFY05254.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Phascolarctobacterium sp. YIT 12067]
          Length = 400

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 124/384 (32%), Positives = 191/384 (49%), Gaps = 8/384 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-SIFFGG 78
            +Y+H PFCV+KC YCDF S+    +  + ++  +   E+          + + SI+FGG
Sbjct: 16  ALYLHIPFCVQKCLYCDFASYAGFGEQAKRDYTDAVCKEIALRAAEAANMAANASIYFGG 75

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + IA +++ + +        E TIE NP + ++   Q  R  G +RIS GVQ
Sbjct: 76  GTPSVLPTECIAKLVNALKQYGFWQQPCEATIEVNPGTADLAKLQTLRSLGFDRISFGVQ 135

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++  LR +GR HNA +A+ A+ LAR   F R+S DLIY LP QT+T  +  L+R    
Sbjct: 136 SLQDDELRAIGRIHNAQQALEALALARKAGFARISADLIYGLPSQTLTSLQDTLERLADT 195

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S+Y L +E GT    +   G + LP ++ A D+Y L QS     G   YEISN++
Sbjct: 196 GIEHISVYGLIVEDGTPLASLVDKGRITLPDDDTAADMYELVQSFLRERGFERYEISNYA 255

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN--GHAV 315
             G  S HN  YW Y  Y+  G  A             +++++          +    A+
Sbjct: 256 KNGQYSRHNTVYWEYHPYMAFGAAACGFDGQRRRTGLSTVKEYIGQLQSFGGDDLRASAL 315

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
              E LS  +  +EF+ MGLR  EG S+ +     G ++       L     Q  I    
Sbjct: 316 YNVEKLSCAELLEEFMFMGLRRSEGASLAEARERFGVDVLQRFASELAPLFEQKLIAYDA 375

Query: 373 F-SRLRCTQRGMTMLDSVIANLAV 395
              RLR T+RGM + + +     +
Sbjct: 376 STQRLRLTERGMEVGNQIFEVFVI 399


>gi|147669419|ref|YP_001214237.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dehalococcoides sp. BAV1]
 gi|146270367|gb|ABQ17359.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dehalococcoides sp. BAV1]
          Length = 378

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 119/383 (31%), Positives = 189/383 (49%), Gaps = 12/383 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            NSL +Y+H+PFC+KKC YC F S+  + +   + ++     E++     T    + S++
Sbjct: 3   QNSLALYMHFPFCLKKCGYCSFISYPDKLESVPD-YVNCLKKEIKLR---TEGLCLHSLY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +A I+  I     +    EIT EANP ++ +   +     G+NR+SL
Sbjct: 59  FGGGTPSLLSPSQVADIMSSIQTVSHLLPGAEITFEANPGTLSLPYLKQLSGLGINRLSL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR H+A +A      AR + F  ++ DLIY LP  T+  ++  L   
Sbjct: 119 GIQSFSDAELTMLGRLHDAQQARHIYTQARISGFDNINLDLIYGLPHSTLLSFKANLSEM 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    +H+SLY LT+E+ T  Y   + G L      +A D Y L + +  + G H YEIS
Sbjct: 179 LKLEPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLESAGYHHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW+   Y+G+G   HS  +       I ++++   W      +  +
Sbjct: 239 NWAKQGYESRHNLTYWQNRPYLGLGVAGHSFFQNWRTANTIDLDEYLLCWQ---NNSPPS 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERV 371
             E   +    Q  E +++GLRL +G++ +D E   G    ++     +     G +E  
Sbjct: 296 PSENINVDLANQLAETIILGLRLDKGVTAEDIEARFGTCVMDMYYPQIQECVELGLLEEH 355

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               +R T RG  + + V     
Sbjct: 356 D-GCIRLTPRGRLLSNEVFWRFL 377


>gi|124008144|ref|ZP_01692842.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microscilla marina ATCC 23134]
 gi|123986392|gb|EAY26205.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Microscilla marina ATCC 23134]
          Length = 376

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF+  V +        +++   E+   +       + +I+FGGG
Sbjct: 3   SLYIHIPFCKQACYYCDFHFSVNQNNKKL--IVEAIKKEIVLQKNYLSNNRLRTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  Q +A I + I   ++V  N EIT+EANP  +       +++ G+NR+S+G QS
Sbjct: 61  TPSLLNEQELAGIFETIHHTFSVVPNAEITLEANPDDLTKEKLLLFKRQGINRLSIGTQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L++L R HNA+EA  +I +A++  F  +S DLIYA+P      W+ +LQ+ +S  
Sbjct: 121 FQDACLQYLNRAHNATEAKQSILMAQDRGFDNISIDLIYAIPVANNKVWQEDLQQTVSLQ 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LTIE+ T+F +  +   +   ++  A + +N   +    +    YEISN + 
Sbjct: 181 VQHISAYCLTIEEKTVFGRQLQKQLINPINDEFASNQFNSLIAHLEQNQFTQYEISNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN NYW    Y+GIGP AHS           +  K    +L+ + KN     EK
Sbjct: 241 PGFYSQHNSNYWIKNPYLGIGPSAHSYNGSTRQFNIANNGK----YLQALAKNTIP-FEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E LS   Q +E++M  LR   G  ++        NL  E          +  + +++   
Sbjct: 296 EELSKANQVNEYIMTSLRTIWGCDLRKISHNFDINLLYENKSYIHEYIDKKLL-KLEDDV 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L+ T  G    D + ++L +
Sbjct: 355 LKLTNNGKLFADKIASDLFI 374


>gi|256545387|ref|ZP_05472750.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398948|gb|EEU12562.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           vaginalis ATCC 51170]
          Length = 374

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 114/382 (29%), Positives = 198/382 (51%), Gaps = 13/382 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDF +  +  +    ++ ++   E+    Q      + SI+ 
Sbjct: 2   EKIGIYIHIPFCKKKCFYCDF-TAFQNLESWIASYFENLKKEIILY-QKNMNVEVDSIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ ++   I  +++ + KN+ +S+  E TIEANP+S+ +   + Y+  G+NRISLG
Sbjct: 60  GGGTPTYVDYHYIDELVEIL-KNFDLSNVKEFTIEANPNSLTLEKLKAYKNLGINRISLG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +++ L+ +GR+HN    +  I   R   F  +S D+I  LP       + +L+   
Sbjct: 119 VQSFDDKVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEIIK 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +HLS Y L +EKG+ FY ++K   L L  +++  D+++  +      GL  YEISN
Sbjct: 179 KINPEHLSYYSLILEKGSHFYSLYKKDKLKLMDDDLERDIFSYIEKYLKNLGLDRYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S  G ES HN  YW  G Y+  G GA   +    +    +  K    + K++ +    +
Sbjct: 239 FSKKGFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVK----YEKLINEGKFPI 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQ 372
             +EF+S +++  E+++  LR   GI++K++E + G++L     E      + GF +   
Sbjct: 295 EFREFISKDEREKEYIIFKLRETSGINLKEFENIFGQSLLEKYSEPVEKFLKLGFFKI-- 352

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R+R T +G  + +     + 
Sbjct: 353 DDRIRFTHKGFDLSNEFFIEII 374


>gi|291543944|emb|CBL17053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus sp. 18P13]
          Length = 365

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 188/382 (49%), Gaps = 22/382 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S   G+YVH PFC  KCPYCDF S+  R +   E +       +          S+ +++
Sbjct: 2   STPAGLYVHVPFCAVKCPYCDFYSNPYRRE-RAEAYAARVAENL---AAYPAELSVDTVY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS++ P  +  +L    + ++++++ EIT+E NP +        +R  GVNR+S 
Sbjct: 58  FGGGTPSILPPPLLGQMLHAARRRFSLAADTEITLEVNPLTATPAALDAWRGLGVNRLSF 117

Query: 136 GVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR H A++   A    A   F  +S DL+   P QT       L   
Sbjct: 118 GMQSAVDAELHRLGRRHTAAQGIAAVDRAAAAGFQNISCDLMLGTPGQTGESLAQSLAVY 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y L+IE GT F    +     +P  + A  LY         HG   YEIS
Sbjct: 178 AQLPIAHVSAYLLSIEPGTPFDT--EAMRSQVPDGDAAALLYVQMAECLEQHGFRQYEIS 235

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HNL YW+  DYIGIGP AHS      +    ++    + +L+  R+    
Sbjct: 236 NFARPGFESRHNLKYWQCVDYIGIGPAAHSCFNGRRY----AVPSDLDGFLQAPRQ---- 287

Query: 315 VVEKEFLSSEQQA--DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
              +E L+ E+    +E +M+GLRL EGI  +D+       L +     LQR G +  ++
Sbjct: 288 ---QEILTDEEPYTPEERVMLGLRLAEGIRQQDFSESCWAGL-LRRAEPLQRAGML-WIE 342

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R+R T++G  + +SVI +L 
Sbjct: 343 PDRIRLTRQGFLVSNSVICSLV 364


>gi|193211903|ref|YP_001997856.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobaculum
           parvum NCIB 8327]
 gi|193085380|gb|ACF10656.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobaculum
           parvum NCIB 8327]
          Length = 375

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/378 (32%), Positives = 192/378 (50%), Gaps = 8/378 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             +YVH PFC ++CPYCDF    R      E F ++   E      L   R+I +I FGG
Sbjct: 2   FSLYVHIPFCRERCPYCDFFLITR--PGFVERFFEALAVETASKASLLEGRTIDAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    I+  L+ +A    +S++ EIT+EANP  ++       R AGVNR+S+GVQ
Sbjct: 60  GTPSLVPVSFISGWLEQVAGLAGLSADTEITLEANPEDLDTATLDALRAAGVNRLSIGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ LR LGR H A++A   +  A   FP +S DLI     ++  +WE +L+ AL + 
Sbjct: 120 SFTDRKLRALGRAHTAADAERTVSEALERFPSVSIDLICGAEGESAREWEGDLRAALRFR 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LT+E+ T  ++    G   LP E     +Y     +    G   YE+SN++ 
Sbjct: 180 PQHVSVYMLTLEEKTRLWRDVSKGLRELPGEGQQASMYRQAMMMLCGAGYRHYEVSNYAL 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +NL+ W+   Y+G GP AHS ++     V  S   +   +L       +A   +
Sbjct: 240 EGHHSRYNLSSWKREPYLGFGPSAHSFLQTAEGEVRFSNASNLHRYL---TDPANATDFR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE--MLAGRNLDIECERNLQRQGFIERVQFSRL 376
           E L++ Q+ DE + + LR+R+G++V+        G     +    LQ +G+I  V+  ++
Sbjct: 297 EVLTAGQRFDEEVFLSLRIRKGLTVEFLRKGHTLGLQRLDDRLARLQAEGWIA-VEGGQV 355

Query: 377 RCTQRGMTMLDSVIANLA 394
             T  G    D V   L 
Sbjct: 356 TLTDDGFLFADLVAGELL 373


>gi|304320168|ref|YP_003853811.1| coproporphyrinogen III oxidase [Parvularcula bermudensis HTCC2503]
 gi|303299071|gb|ADM08670.1| coproporphyrinogen III oxidase [Parvularcula bermudensis HTCC2503]
          Length = 376

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 145/379 (38%), Positives = 212/379 (55%), Gaps = 10/379 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+Y+HWPFC + CPYCDF    R   V ++ +I +FL ++       G R I S++
Sbjct: 2   TPPTGLYLHWPFCDRICPYCDF-VVARGRDVDEKAWISAFLADLDDSAARWGRRQIVSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  +  +L GIA  + ++S+ E+TIE NP+++E    + YR  G+NR+S+
Sbjct: 61  FGGGTPSLLSPHGLNRLLGGIADRYDLASSAEVTIEVNPTALEAQRLRAYRALGINRVSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ LRFLGRNH+   A   I  A  +F R++ D IYALP +T+  W   L+  L
Sbjct: 121 GVQSFDDEHLRFLGRNHDGGTARGVIDQAAALFDRVTADFIYALPGETIEDWTRRLRAIL 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  V HLSLYQLTIE+GT F      G     S+ +A DLY  T   T A G+ AYEIS+
Sbjct: 181 SLPVSHLSLYQLTIEQGTAFGLQVDKGRWTPASDAMAADLYQATLEETMAAGMPAYEISS 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           H+  G E++HN  YW  GD+IGIGPGAH R+     R+A +      ++      +    
Sbjct: 241 HARPGHEAVHNRLYWMEGDWIGIGPGAHGRITHQGQRIATAPRVPIRAYCSTPPADR--- 297

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           VE+  L+  +   E L  GLR  +G++  D        L  E   +  R+G++   +  R
Sbjct: 298 VERAPLTPSEMRVERLAGGLRTLDGVATSDLSF-----LPPERLEDFLREGWLIP-RADR 351

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +   +    + D +IA L 
Sbjct: 352 MTIPRTHWILADGLIARLC 370


>gi|119358143|ref|YP_912787.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium phaeobacteroides DSM 266]
 gi|119355492|gb|ABL66363.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 374

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 192/379 (50%), Gaps = 11/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC  +C YCDF    R+  V  + F ++ L E +    L   RS+ +I FGG
Sbjct: 2   LSLYVHIPFCRTRCSYCDFYLVTRQDLV--DPFFEALLAETRARLSLLKGRSVKAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  +++   L+  +   + + +VEIT+EANP  +          AG+NR+S+GVQ
Sbjct: 60  GTPSLLPVRHLVRWLELASTYCSFTPDVEITLEANPEDLAGGRMFELHAAGINRLSIGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L  LGR+H   +A+ A+  A ++F  +S DLI A+P +T  +W  +L+ A +  
Sbjct: 120 SFIQRKLAALGRSHTREDALRAVRAAGDLFQSVSVDLICAVPCETRDEWASDLRDATALQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS+Y L++E  T  ++    G++ +P E++   LY       + HG   YE+SN S 
Sbjct: 180 LPHLSVYMLSVEPKTRLHRKVSRGEVTVPDEDIQATLYEDALGNLAGHGYRHYEVSNFSV 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +NL  W    YIG GP AHS ++ G   +  +       +   +    +AV   
Sbjct: 240 EGHHSRYNLACWMREPYIGFGPSAHSFIREGGVEIRQANVSVLSRY---IADPQNAVTFY 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
           E LS +++  E + + LR+  G+ +       G  L     E    L  +G++   +  +
Sbjct: 297 EELSEKERFLEQVFLTLRINSGLDIGFLRK--GNKLGHYMTEKIEELTARGWV-LDEGGQ 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T +G    D +   L 
Sbjct: 354 LFLTSKGFLFADHIAGELV 372


>gi|331090752|ref|ZP_08339599.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 2_1_46FAA]
 gi|330399860|gb|EGG79519.1| oxygen-independent coproporphyrinogen III oxidase [Lachnospiraceae
           bacterium 2_1_46FAA]
          Length = 374

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 121/383 (31%), Positives = 196/383 (51%), Gaps = 15/383 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFCVKKC YCDF S     +   E ++++ + E++ +  +     + ++F 
Sbjct: 3   RDLELYIHIPFCVKKCAYCDFLSGPADEET-MEYYVRALIREIESIESMKEMYRVVTVFV 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS++  + I  I   + + + + S  E+TIEANP +V     + YR AG+NRIS G
Sbjct: 62  GGGTPSVLGGEQIERIFAALREKFAMESVREVTIEANPGTVTREKLKAYRSAGINRISFG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ LGR H   E + +  LAR   F  ++ DLI A+P QT+  W+  + R L
Sbjct: 122 LQSANNGELKQLGRIHTYEEFLESYMLAREEGFDNINIDLISAIPNQTVESWKSTVDRIL 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH---KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +H+S Y L +E+GT F KM+    +    LPSE     +Y  T+      G   YE
Sbjct: 182 KLQPEHISAYSLIVEEGTPFEKMYGEDGNRKEELPSEEEERLIYQKTKKWLQEAGYERYE 241

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G    HNL YW   +Y+G+G GA S +     +    ++ + + +   VRK  
Sbjct: 242 ISNYAKKGYACRHNLGYWERKEYLGLGLGASSLIGNVRFQNTEEMKTYLK-YSDDVRKRK 300

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
                       ++    + +GLR ++GIS K+ +   G  ++      +  QGF+E   
Sbjct: 301 QNEEVLTKEEELEEI---IFLGLRKKDGISKKEVDFFCGEQIE-----KMICQGFLEEKD 352

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            + +R T+RG+ + + V A +  
Sbjct: 353 GN-IRLTERGIDISNYVFAEILA 374


>gi|229824838|ref|ZP_04450907.1| hypothetical protein GCWU000182_00187 [Abiotrophia defectiva ATCC
           49176]
 gi|229790841|gb|EEP26955.1| hypothetical protein GCWU000182_00187 [Abiotrophia defectiva ATCC
           49176]
          Length = 385

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/389 (29%), Positives = 203/389 (52%), Gaps = 20/389 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           LG+YVH PFC +KC YCDF S        + N+I++   E++ + ++++    + +I+FG
Sbjct: 4   LGIYVHIPFCARKCNYCDFYSLASGEDEKK-NYIEALKREIKEVSKKVSTDYEVYTIYFG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSN---VEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGTPS+I+   I  ILD I   + +  +    EITIE NP +V+      Y +AG+NR+S
Sbjct: 63  GGTPSIIKADYIREILDVIRSYFKLYKDDFYPEITIECNPKTVDTEKLSIYSEAGINRVS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS +   L+ LGR H   + + +  + R   F  ++ DL+ A+P Q +  +E  L  
Sbjct: 123 LGLQSTDNDELKLLGRIHTYEDFLESYEMVRKSGFKNVNIDLMSAIPNQKIKTYEKSLNE 182

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV---LPSENVAVDLYNLTQSITSAHGLHA 250
            +    +H+S Y L IE+GT F+K + +       LPSE+   ++Y LT       G   
Sbjct: 183 IIRLNPEHISSYSLIIEEGTPFFKKYSENAPHFKDLPSEDEDREMYALTSEKLGKAGYER 242

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVR 309
           YEISN++  G  S HN +YW    Y+G G GA S  +   ++   + +++ +   ++ +R
Sbjct: 243 YEISNYAKPGFYSRHNTSYWERVPYLGFGVGASSFFEDERYKNRANFKEYIKKAGIEDIR 302

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +      E   L+      EF+ +GLR   GIS  +++ +    ++    + +++    G
Sbjct: 303 E------EITKLTLNDTMTEFMFLGLRKTAGISKSEFKKIFTFTVENVFGKMIEKHIKNG 356

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +       L+ ++RG+ + + VI+   +
Sbjct: 357 LL-LNDGEFLKLSERGLDISNYVISYFLL 384


>gi|121997762|ref|YP_001002549.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Halorhodospira halophila SL1]
 gi|121589167|gb|ABM61747.1| coproporphyrinogen III oxidase, anaerobic [Halorhodospira halophila
           SL1]
          Length = 408

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 132/377 (35%), Positives = 204/377 (54%), Gaps = 13/377 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
            G     L VY+H P+C+++C YCDFN+H  R ++    ++ +   E++        R +
Sbjct: 5   AGAQLPPLAVYIHLPWCLQRCGYCDFNAHALRGELPARAYVDALGRELRRQAPAALGRRV 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S+F GGGTPSL  P  I  +LD +     + S  EIT+EANP + E    +G+R+AGV 
Sbjct: 65  TSVFIGGGTPSLFPPGPIGELLDTLDAVLGLESGAEITLEANPGASENARLRGFRQAGVT 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           R+SLGVQSL++  L  LGR H+A  A  A+  A  +  R ++ D++Y LP Q +T  E +
Sbjct: 125 RLSLGVQSLDDTLLARLGRIHDAVAAREAVAEAYAVGFRGINADVMYGLPGQGVTGAEAD 184

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   ++   DH+S YQLTIE  T F +        LP E   +++  + +   +  GL  
Sbjct: 185 VAGVIALGADHVSHYQLTIEPETPFGRRPP---PGLPDEETVLEMEAVCRQRLAQAGLER 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-PESWLKMVR 309
           YE+S  +  G  S+HNL YW +GDY+G+G GA  +      RV  + ++  P +W+  V 
Sbjct: 242 YEVSAFARPGQRSVHNLGYWTFGDYLGLGAGAAGKRTGADGRVLRTRQRRSPRAWMAAV- 300

Query: 310 KNGHAVVEKE--FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQ 365
             G A VE E   L+  +QA E L+ GLRLREG+  +     +G +L    +    L   
Sbjct: 301 --GSARVEAECIELTPSEQAFEVLLNGLRLREGLPERLAVARSGCSLPALRDWLAPLCAG 358

Query: 366 GFIERVQFSRLRCTQRG 382
           G++E  +  R+R +  G
Sbjct: 359 GWLE-WRGGRIRASAAG 374


>gi|301060327|ref|ZP_07201190.1| putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium NaphS2]
 gi|300445523|gb|EFK09425.1| putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium NaphS2]
          Length = 367

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 191/372 (51%), Gaps = 16/372 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KCPYC F S   +       +++    E+   +         +++ GGG
Sbjct: 4   GLYVHVPFCDSKCPYCGFYSIPSK--TPVAGWLKGLEKEIFHTKNRFE--RFDTLYLGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  +++  IL  I  ++ ++ + EIT+EANP  V +      R  GVNRI+LGVQS
Sbjct: 60  TPSMLSDRDLERILSLIFDHYPLTPDAEITLEANPCQVTLAKADFIRSLGVNRINLGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+FLGR H++  A  A+ HL    F  +  DLIY    Q M  W   L++ALS+ 
Sbjct: 120 FDDRVLKFLGRRHSSQRAEDAVRHLRSAGFQNIGLDLIYGFKAQPMKAWMTTLKKALSFE 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS YQLT+EKGT+F +  +  + ++  E  A   +  T +     G   YE+SN + 
Sbjct: 180 PEHLSCYQLTLEKGTVFKRRSQKNNSIILPEKTAAAHFLATSAFLENKGYVHYEVSNFAL 239

Query: 259 LGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             + ES HN  YWR+  Y+G+GP AHS       +      +    + K + +N   V  
Sbjct: 240 NKSLESRHNRKYWRHIPYLGLGPSAHSF----DGKQRWWNVRSVREYCKALNENRLPVEG 295

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E L+ EQ   E L +G+R R G+        +G  L +     LQRQG + +++     
Sbjct: 296 NETLTKEQLHLESLALGVRTRHGVDTTILPPASGNALFM-----LQRQGLL-KIKRGHAI 349

Query: 378 CTQRGMTMLDSV 389
            T+RG  M D +
Sbjct: 350 PTRRGYLMADHL 361


>gi|294673365|ref|YP_003573981.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           ruminicola 23]
 gi|294473953|gb|ADE83342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella ruminicola 23]
          Length = 375

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 20/384 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIF 75
           G+YVH PFC  +C YC F S        +E ++ +   E++     T P     S+ +I+
Sbjct: 3   GLYVHIPFCSSRCVYCGFYS--TTGLALRERYVDALCQEIKMRSLPTNPPQKEGSLGTIY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS +    +  I D I     V ++ E+TIE NP  V        ++  +NR+S+
Sbjct: 61  LGGGTPSQLTIPQLRRIFDAIYIYNKVENDAEVTIEVNPDDVTPELAAALQQLPINRVSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+  ++ L FL R H++++   A+  L +  F  +S DL+Y  P QT+ +W+ ++  A
Sbjct: 121 GAQTFNDERLHFLRRRHSSAQVHQAVATLRQAGFQNISIDLMYGFPNQTLEEWQADIDEA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   V+H+S Y L  E+GT  Y++ + G +    E +   +Y    +   + G   YEIS
Sbjct: 181 LQLNVEHISTYCLMYEEGTPLYRLLEQGKVAEIDEELERKMYFTLINSLESAGYEHYEIS 240

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G  S HN +YW+   YIGIG  AHS            I+++  +      + G  
Sbjct: 241 NFARPGYRSRHNSSYWKGIPYIGIGAAAHSFDIQTRSWNVADIQQYITA-----MEQGER 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERV 371
             E E L  + + ++ + + LR  EG+ +              C +N QR    G + ++
Sbjct: 296 CFEAETLDEDTRYNDAVTVALRTCEGLDLSTLTD----QQRAYCLKNAQRHLEAGLL-KL 350

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
              ++  T+ G+ + D ++++L +
Sbjct: 351 NDQKISLTKEGLFVSDMIMSDLML 374


>gi|116748799|ref|YP_845486.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Syntrophobacter fumaroxidans MPOB]
 gi|116697863|gb|ABK17051.1| coproporphyrinogen III oxidase, anaerobic [Syntrophobacter
           fumaroxidans MPOB]
          Length = 371

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 125/372 (33%), Positives = 185/372 (49%), Gaps = 14/372 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KCPYCDF S      +    ++++ + E+   R         S++ GGG
Sbjct: 8   GLYVHIPFCRSKCPYCDFYSTTSLELLPL--WLEAVVKEIDGYRGRFAL--FDSLYLGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++   +  ++D + + ++ S + EIT+EANP  +     +     GVNRISLGVQS
Sbjct: 64  TPSLVDAARLGALIDHLRRAFSFSDDTEITLEANPDDITPGRLREVLDLGVNRISLGVQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L+E  LR L R H A +A  A+ + R+  F  +  DLIY LP QT+  W   L RAL + 
Sbjct: 124 LDEGELRLLKRRHTALQAEEALAIIRSAGFENVGIDLIYGLPGQTVPGWLKTLDRALGFG 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS YQ+T E+GTLF K  K G +    E+V    +  T       G   YEISN + 
Sbjct: 184 PEHLSCYQMTYEEGTLFGKKLKKGTMRPLGEDVERAFFLRTSRFLEKRGYLHYEISNFAR 243

Query: 259 -LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HN  YWR    +G+GP AHS           S+      + + +      V  
Sbjct: 244 APEFVSRHNRKYWRRVPCLGLGPSAHSFDNDSRWWNVRSVS----DYARRLMSGQSPVAG 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L+ EQ   E L +GLR  +G+ ++ +   A  +        L   G IE ++   + 
Sbjct: 300 REILTPEQVQLERLSLGLRTSDGVPLETFASCADYS---GVLTRLSDSGLIE-IRGGSVV 355

Query: 378 CTQRGMTMLDSV 389
            T++G  + D +
Sbjct: 356 PTRKGFLVADGL 367


>gi|311693171|gb|ADP96044.1| putative oxygen-independent coproporphyrinogen III oxidase [marine
           bacterium HP15]
          Length = 360

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 118/369 (31%), Positives = 180/369 (48%), Gaps = 14/369 (3%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +KCPYCDFNSH     + +  ++Q+ L ++         R I ++F GGGTPSL+     
Sbjct: 2   RKCPYCDFNSHAFTGTIPESAYLQALLEDLDQDLAFATDRPIETVFIGGGTPSLMSGDFY 61

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             +   +      ++N EIT+EANP ++E   F  +R AG+NR+S+GVQS     L+ LG
Sbjct: 62  DRLFRELRARLAFATNAEITLEANPGTLEAGRFDAFRAAGINRLSIGVQSFNPDHLKTLG 121

Query: 150 RNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H+  +   A     R  F   + DL++ LP QT  Q   ++Q AL Y   HLS YQLT
Sbjct: 122 RIHDADAAHRAIRAARRAGFDNFNIDLMHGLPGQTPGQAIEDIQTALDYKPPHLSWYQLT 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +E  T FY         LP ++   D+Y         HG   YE+S  S  G  S HNLN
Sbjct: 182 LEPNTEFYSRPP----ELPDDDHLWDIYRRGSDYLHQHGYEDYEVSAWSLQGRASRHNLN 237

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
           YW +GDY+ +G GAH ++ +    +    + + P+++L  +   G      + ++ +   
Sbjct: 238 YWTFGDYLALGAGAHGKISLVDGSIRRYWKTRQPDAYLNRI---GSRTAGSDAIAVDDLP 294

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTM 385
            EFLM  LRL+EG+    +    G  L         L+ +  +      RL+ T  G   
Sbjct: 295 LEFLMNALRLKEGVDESLFSERTGLPLTTVGVKLERLRNEKLLV---SDRLQATDLGQRY 351

Query: 386 LDSVIANLA 394
           L+S++    
Sbjct: 352 LNSLLERFL 360


>gi|238754616|ref|ZP_04615970.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia ruckeri ATCC 29473]
 gi|238707247|gb|EEP99610.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia ruckeri ATCC 29473]
          Length = 347

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 120/358 (33%), Positives = 194/358 (54%), Gaps = 17/358 (4%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           +  V  + ++   L ++     LT  R+IS+IF GGGTPSL+  + +  +LDG+     V
Sbjct: 2   KGDVPHQEYVDHLLADLDADLPLTSGRAISTIFIGGGTPSLLSAEAMQSLLDGVRARLPV 61

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +++ EIT+EANP +VE + F GY++AGVNRIS+GVQS  EQ L  LGR H   EA  A  
Sbjct: 62  AADAEITMEANPGTVEADRFSGYQRAGVNRISIGVQSFSEQKLVRLGRIHGPEEAKRAAA 121

Query: 163 LARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           LA  +  R  + DL++ LP QT+ +   +L++A++    HLS YQLTIE  T F      
Sbjct: 122 LATGLDLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP- 180

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
               LP ++   D++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG G
Sbjct: 181 ---KLPDDDALWDIFEQGHQLLSAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCG 237

Query: 282 AHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           AH ++     R+  +++ KHP  +++     G+ + ++  +    +  EF M   RL E 
Sbjct: 238 AHGKLTFSDGRILRTVKTKHPRGFMQ-----GNYMDKQHEVEVADRPFEFFMNRFRLLEA 292

Query: 341 ISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               D+    G     +  + ++ + +   +E  +    + T++G   L+S++  L +
Sbjct: 293 APRGDFFNFTGLEESEIRPQLDQAITKGYLLETNED--WQITEKGKLFLNSLL-ELFL 347


>gi|330722154|gb|EGH00056.1| Radical SAM family enzyme2C [gamma proteobacterium IMCC2047]
          Length = 343

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 198/352 (56%), Gaps = 17/352 (4%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + + L +++   +    R ++SIFFGGGTPSL    +I  +L+G+ ++ + S ++EIT+E
Sbjct: 1   MDALLVDLRNDLEFVEGRPLASIFFGGGTPSLFSASSIGRLLEGVERDISFSKDIEITLE 60

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
           ANP + E   F  +R+AG+NR+S+G+QS ++  L+ LGR HN+ EA  AI +A+   F  
Sbjct: 61  ANPGTFEQQKFADFRRAGINRLSIGIQSFDDLQLQKLGRIHNSGEAQRAIGMAQQAGFDN 120

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            + DL++ LP Q++ Q   +LQ A+ +A  HLS YQLTIE  T FYK        LPS++
Sbjct: 121 FNLDLMHGLPDQSIKQALADLQTAIDFAPKHLSWYQLTIETNTEFYKQPP----RLPSDD 176

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---- 286
               ++   Q++ +  G   YE+S +S  G  SLHNLNYWR+GDY+GIG GAH ++    
Sbjct: 177 ARWQIFQQGQALLAEEGFQQYEVSAYSQPGKASLHNLNYWRFGDYLGIGAGAHGKITRLS 236

Query: 287 -KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G+  +     + P+ +L  +          E +  E  A EF+M  LRL EG ++  
Sbjct: 237 KGAGATLMRTRKTRTPKDYLNAIGAGRL----IETIDQEDIAGEFMMNALRLNEGFTLDA 292

Query: 346 WEMLAGRN--LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++   G    L     +    +G +E  + +R++ T+ G   LD ++A L +
Sbjct: 293 FKQATGLPGTLLSSGIKQASAKGLLEIDELNRVKPTKNGRLFLDDLVA-LFI 343


>gi|239637605|ref|ZP_04678577.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus warneri L37603]
 gi|239596823|gb|EEQ79348.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Staphylococcus warneri L37603]
          Length = 377

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 23/385 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +    K   + ++ S + EM+  R L    ++++++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFI-DKQPVDEYLDSLILEMER-RTLNDNTTLNTMYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  +L  I + +T+    E + EANP  +     +  +  GVNRIS+GVQ+
Sbjct: 63  TPTALNIEQLNKLLSAINRIFTIEG--EFSFEANPDELTFEKVKLLKSYGVNRISMGVQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR H   +   A++ AR      +S DL+Y LPKQT+  +E  L  A+   
Sbjct: 121 FKPELLEILGRTHKTEDIYQAVNNARKAGIESISLDLMYHLPKQTLEDFEDSLNLAMQMD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y L +E  T FY M++ G L LP+E++  ++Y            H YEISN S 
Sbjct: 181 IDHISSYGLILEPKTQFYNMYRKGHLKLPNEDLGAEMYQKLMHKIEDSRFHQYEISNFSI 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA        +     +      ++K +      ++ +
Sbjct: 241 EGHESEHNKVYWLNEEYYGFGAGASGYTNGVRYTNVNPVN----HYIKAIANQEEPILTQ 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKD--------WEMLAGRNLDIECERNLQRQGFIER 370
              ++ +Q +E + +GLRL  G++            E + G+ +      +L+ +  IE 
Sbjct: 297 TRPTATEQMEEEMFLGLRLNNGVNKNKFNKKFNVSIEHIFGQTI-----IDLKNRKLIEE 351

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            Q   +  T+RG  + + V     +
Sbjct: 352 SQ-DYIYLTERGKVIGNEVFEAFLL 375


>gi|94987259|ref|YP_595192.1| coproporphyrinogen III oxidase-like protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731508|emb|CAJ54871.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 397

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 119/385 (30%), Positives = 201/385 (52%), Gaps = 17/385 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRR-----YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +Y+H PFC  +C YC F S          +   + +  +   E+ +        +I +IF
Sbjct: 3   LYIHIPFCKTRCYYCSFFSKPLDTSSIDGQQKLQTYFVTLKNELSYWGNKLQKPTIETIF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRIS 134
           FGGGTPSL+ PQ I  IL+ I++ + ++S +EIT+EANP S+  ++  + Y  AG+NR+S
Sbjct: 63  FGGGTPSLLSPQYIYKILEHISQYYRLTSKIEITLEANPESLTTLSLIKEYLMAGINRVS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG Q++  + L  LGR HN  +AI + ++ R+     ++ DLI+ LP QT+ +W   ++ 
Sbjct: 123 LGFQAINNKQLHHLGRTHNIIDAIQSYNMLRDALCTNINIDLIWGLPNQTVQKWLTTIKY 182

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +H+S Y LT+E GT+F K + +  L LPSE   + ++  T++     GL  YEI
Sbjct: 183 VAELKPNHISSYNLTLEPGTIFNKQYVNKKLTLPSEEEQITMFFQTKTYLEEKGLLQYEI 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G +  HN  YW   DY+G+GP A S +         +       W  +V K   
Sbjct: 243 SNFAQPGYQCKHNNGYWEGKDYLGVGPSATSTLN----HYRWTNPADLSLWSLLVEKKKE 298

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIER 370
               KE++ ++ Q  E  M+ LR  +G+++ ++  +A  N     +     L+++  I +
Sbjct: 299 PP--KEYIDNKTQVLELFMLRLRTTKGLNINEYNTIAKNNFIDSYKNLIFKLEKEQLI-K 355

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
           +  + L+ T  G  + +S+I    V
Sbjct: 356 IDSNYLKLTPLGQLVSNSIIKEFFV 380


>gi|302346343|ref|YP_003814641.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica ATCC 25845]
 gi|302150472|gb|ADK96733.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica ATCC 25845]
          Length = 415

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 112/419 (26%), Positives = 194/419 (46%), Gaps = 50/419 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRS--- 70
           LG+Y+H PFC  +C YC F S V   K  +     E ++ +   EM+   +     S   
Sbjct: 2   LGLYIHIPFCASRCIYCGFYSTVPAKKKDERLSVEERYVNAICHEMELRAEKNSDNSGER 61

Query: 71  ---ISSIFFGGGTPSLIEPQNIALIL-------------DGIAKNWTVSSNVEITIEANP 114
              +S+I+ GGGTPS +  +++  I              D      T ++++EIT+E NP
Sbjct: 62  IGGLSTIYLGGGTPSQLSFESLQKIFQTIDNVYHIGLEWDTENNTCTTATHIEITMECNP 121

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             +     Q  R   +NRIS+G Q+  ++ LRFL R H A E  AA+   R++    +S 
Sbjct: 122 DDITEEFAQNLRSLPINRISMGAQTFSDERLRFLHRRHTADEVEAAVKRLRSVNIKNISV 181

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +W+ +++R L+  ++H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 182 DLMFGFPNETLEEWKEDIERLLALDIEHISAYSLMYEEGTPLYRLLQAGKVKDMDDELYR 241

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLG------------------AESLHNLNYWRYGDY 275
            +Y+      +  G   YEISN + L                     S HN +YW    Y
Sbjct: 242 QMYDTLIDRLAEAGYEQYEISNFAKLKVQTSNLKVQCSNLKVQSPYRSQHNSSYWHNVPY 301

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
           IGIG  AHS                 ++++  + ++     E+E + ++   ++ +M  L
Sbjct: 302 IGIGASAHSYSNGKRSWNIADT----KAYIAAIEEDRLP-CEEEIIDADTHYNDMIMTTL 356

Query: 336 RLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           R  EGI +          L +   + LQ+QG ++      L  T+ G+ + DSV+++L 
Sbjct: 357 RTCEGIDLSTLSAEYQTYL-MHLAKPLQQQGLLKE-DNGWLHLTRNGIYVSDSVMSDLM 413


>gi|167627217|ref|YP_001677717.1| coproporphyrinogen dehydrogenase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597218|gb|ABZ87216.1| Coproporphyrinogen dehydrogenase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 380

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 118/385 (30%), Positives = 189/385 (49%), Gaps = 15/385 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      +++ +  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHAIKNDTYLSQDYYKKLIADFDTHLTDLQDREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL +   +  +L  I  N  ++ N EIT+E NP +VE  +   Y   G+NRIS
Sbjct: 65  FIGGGTPSLFKADYLGKVLQHIKDNSKLNPNCEITLEMNPGTVERGSISDYANIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS + + L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 VGVQSFQNEKLQLLGRIHNCDNVYTTIEEIKNSRISNFNIDIMHGLPNQSFEDGIFDISQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E     +    + +    G + YEI
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKPP----KLPDEETLEQIEITGKKLLQQAGYYQYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S ++     S+HN NYW +GDYIGIG GAHS++              KHP+ + +     
Sbjct: 241 SAYAKDNLRSIHNSNYWNFGDYIGIGAGAHSKITNLQTKEIKRTWKHKHPKIYSQA---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
            + + +   +S +    EF++  LRLR+G S   +E     + D      +    +G + 
Sbjct: 297 DNFIKDSNVVSQDDLVYEFMLNTLRLRDGFSFDLFERQTFLSKDTIQNNLQVAIDRGLL- 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           +V    ++ T +G   L+  I    
Sbjct: 356 KVNKDNVKPTDKGYLFLNDCINTFI 380


>gi|294786880|ref|ZP_06752134.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parascardovia denticolens F0305]
 gi|315226516|ref|ZP_07868304.1| coproporphyrinogen dehydrogenase [Parascardovia denticolens DSM
           10105]
 gi|294485713|gb|EFG33347.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Parascardovia denticolens F0305]
 gi|315120648|gb|EFT83780.1| coproporphyrinogen dehydrogenase [Parascardovia denticolens DSM
           10105]
          Length = 417

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 186/411 (45%), Gaps = 35/411 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSIS--- 72
             VY+H PFC+++C YCDFN++      G   + N+    + EM   RQ    + I    
Sbjct: 2   YSVYIHVPFCIRRCGYCDFNTYTSPDLGGGASRGNYANLAVREMVLARQWQESQGIEEPA 61

Query: 73  --SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +IFFGGGTP+++   ++  ++D +   W +    EIT EANP +V+       +  G 
Sbjct: 62  ASTIFFGGGTPTILAAHDLIRMVDAVRAVWGIEPEAEITTEANPDTVDHAYLAELKAGGF 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            R+S G+QS     L  L R H  +   + +  A+ +    S DLIY  P +++  W+  
Sbjct: 122 TRVSFGMQSAVPSVLATLDRTHTPANVESGVKAAQALGLETSVDLIYGTPGESIQDWDKS 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+     H+S Y LT+E  T   +    G +  P ++     Y       +  GL  
Sbjct: 182 LRAAIDLGTGHISAYALTVEPHTRMGRQISRGIIAAPDDDDQAAKYRAADQAFTQAGLDW 241

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-------HRVAISIEKHPES 303
           YE+SN +  G ES HNL YW   D++GIGPGAHS  + G          +      HP  
Sbjct: 242 YEVSNWARPGHESRHNLGYWHNVDWVGIGPGAHSHYRRGKASAAAEASGLRAWDIAHPRK 301

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-------- 355
           W +++ +        E L  +++ +E +++GLR+R+G+ +   + LA   ++        
Sbjct: 302 WAEVMEEGRLPWQGSESLGWKEKMEEAIILGLRIRDGLDLARLDRLADAGVEGPEGPEGL 361

Query: 356 -----------IECERNLQRQGF-IERVQFSRLRCTQRGMTMLDSVIANLA 394
                       +   +L ++G  +   Q   L  T  G  + D +I    
Sbjct: 362 AGPEGRRRATVTDLVSSLSQEGLAVYDPQADALTATLEGRMLNDLLIERFF 412


>gi|172037002|ref|YP_001803503.1| coproporphyrinogen III oxidase [Cyanothece sp. ATCC 51142]
 gi|171698456|gb|ACB51437.1| oxygen independent coprophorphyrinogen III oxidase 2 [Cyanothece
           sp. ATCC 51142]
          Length = 412

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 31/404 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSI 71
            +  Y+H PFC ++C YCDF   V   KV          +++    E++          +
Sbjct: 6   PVSAYLHIPFCRRRCYYCDFPISVLGDKVDINQSSSIAEYVEFLCEEIKITPSC--HLPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +IFFGGGTPSL+ P  +  IL  + +++ ++S+ EI++E +P +  +     Y+K GVN
Sbjct: 64  ETIFFGGGTPSLLPPPYLEKILLTLDEHFGINSDAEISLEMDPGTFTLEQLSDYKKLGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R SLGVQS +++ L   GR H   +   AI           S DL+  LP Q +  W++ 
Sbjct: 124 RFSLGVQSFDDELLEKCGRFHRYKDIGQAIDFIHQNKIKNFSLDLMSGLPYQNLETWKLS 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ+A+     H+S Y L +E  T F K +K G   LP++     +Y +TQ   +  G   
Sbjct: 184 LQQAIRINPTHISCYDLVLEPVTAFGKQYKPGKFPLPNDQDTSQMYTITQQKLTEAGYEH 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G +  HNL YW    Y G G GA S           + + + E W+  +++
Sbjct: 244 YEISNYAKSGYQCRHNLVYWENKPYYGFGMGAASYTNNQRFTRPKTRKSYYE-WINQLKQ 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL-------- 362
           +G+++     LS      E LM+GLRL++G+ +        +N+     + L        
Sbjct: 303 SGYSIA-SPNLSKVDILLESLMLGLRLQKGVDLSAITRRFDKNIIETIYKTLIPYCQGGL 361

Query: 363 -----QRQGFIERVQFSRLR------CT-QRGMTMLDSVIANLA 394
                     I  +  +  +       +   G  + ++++A+L 
Sbjct: 362 VYFKNINDDLITDLNDNTWQSIQKIMLSDPDGFLLSNTILASLF 405


>gi|145296247|ref|YP_001139068.1| coproporphyrinogen III oxidase [Corynebacterium glutamicum R]
 gi|140846167|dbj|BAF55166.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 351

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 110/352 (31%), Positives = 165/352 (46%), Gaps = 11/352 (3%)

Query: 46  VGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS 104
            G + ++ S   E++  +  L  PR   +IF GGGTPSLI    +A +L  +   + ++ 
Sbjct: 5   AGPDTYLDSLEVELEMAVASLDNPRQAETIFIGGGTPSLIGADGLARVLGAVRNTFGIAD 64

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
             E+T E+NP S     F G R+AG NRISLG+QS     L+ L R H     +AA   A
Sbjct: 65  GAEVTTESNPESTSPEFFDGLREAGYNRISLGMQSASSSVLKVLDRTHTPGRPVAAAKEA 124

Query: 165 RNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           R   F  ++ D+IY  P +T       L   L   VDH+S Y L +E GT   +  + G+
Sbjct: 125 RRAGFEHVNLDMIYGTPTETDDDVRKTLDAVLEANVDHVSAYSLIVEDGTAMARKVRKGE 184

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           L  P E+V  D + L  +   + G   YE+SN +  G E  HN+ YW  GD+ G GPGAH
Sbjct: 185 LPAPDEDVYADRFELIDARLRSAGFDWYEVSNWAKPGGECKHNMGYWVDGDWWGAGPGAH 244

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S +            KHP  +   +      + E E L++E    E +M+GLRL++G+ +
Sbjct: 245 SHIGDRRFYNI----KHPARYSAQIAAGELPIKETEMLTAEDHHTERVMLGLRLKQGVPL 300

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +                   G +       L  T  G  + D +IA++ +
Sbjct: 301 NLFT-----PAARPVIDRHIAGGLLHVNALGNLAVTDAGRLLADGIIADILL 347


>gi|281491634|ref|YP_003353614.1| oxygen-independent coproporphyrinogen-III oxidase [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375352|gb|ADA64865.1| Oxygen-independent coproporphyrinogen-III oxidase [Lactococcus
           lactis subsp. lactis KF147]
          Length = 379

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 181/380 (47%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC   C YCDF   +   +   + +I+S + E Q          + +I+ GGG
Sbjct: 7   SAYFHIPFCSHICYYCDFAKVLMTGQ-PIDAYIESLIEEFQS----FEIEKLRTIYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q +  +L  IA+   +    E T+EANP  +     +    + VNRISLGVQ+
Sbjct: 62  TPSVLSAQQLERLLTAIAEQLDLEVLEEFTVEANPGDLSDEVIKVLADSAVNRISLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR H   +   ++   +   F  ++ DLIYALP QTM   + ++++ L   
Sbjct: 122 FNNALLKKIGRTHTEVQVYDSVERLKKAGFENITIDLIYALPGQTMEMVKSDVEKFLELK 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H++LY L +E  T+F    + G L LPSE+   D+Y     I + +G + YE+SN   
Sbjct: 182 LPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAKNGYNHYEVSNFGL 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW   +Y GIG GA   +    ++    +  + ++            + +
Sbjct: 242 PGFESKHNITYWDNEEYYGIGAGASGYLAGIRYKNLGPVHHYLKA------APTEKRINE 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E LS + Q +E + +GLR + G+ V+ +E     + +    E    L  Q  +      R
Sbjct: 296 EVLSKKSQIEEEMFLGLRKKSGVLVEKFENKFKCSFEKLYGEQITELINQKLL-YDDRQR 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T +G  + ++V     +
Sbjct: 355 IHMTDKGFELGNNVFEKFLL 374


>gi|288802794|ref|ZP_06408231.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica D18]
 gi|288334611|gb|EFC73049.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella melaninogenica D18]
          Length = 422

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 57/426 (13%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRS--- 70
           LG+Y+H PFC  +C YC F S V   K  +     E ++ +   EM+   +     S   
Sbjct: 2   LGLYIHIPFCASRCIYCGFYSTVPTKKKDERLSIEERYVNAICHEMELRAEKNSDSSGER 61

Query: 71  ---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-------------SSNVEITIEANP 114
              +S+I+ GGGTPS +  +++  I   + K + +             ++ +E+T+E NP
Sbjct: 62  IGGLSTIYLGGGTPSQLSFESLQKIFQTVDKVYHIGLEWDIANNTCTTATPIEVTMECNP 121

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             V     Q  R   +NRIS+G Q+  ++ LRFL R H A E   A+   R++    +S 
Sbjct: 122 DDVTEEFAQNLRSLPINRISMGAQTFSDERLRFLHRRHTADEVETAVKRLRSVNIKNISV 181

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +W+ +++R L+  ++H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 182 DLMFGFPNETLEEWKEDIERLLALDIEHISAYSLMYEEGTPLYRLLQAGKVKDMDDELYR 241

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLG-------------------------AESLHNLN 268
            +Y+      +  G   YEISN + L                            S HN +
Sbjct: 242 QMYDTLIDRLAEAGYEQYEISNFAKLKLQSSNFKVQTSKFNVQCSNFKVQSPYRSQHNSS 301

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD 328
           YW    YIGIG  AHS                 ++++  + ++     E+E + ++   +
Sbjct: 302 YWHNVPYIGIGASAHSYSNGKRSWNIADT----KAYIAAIEEDRLP-CEEEIIDADTHYN 356

Query: 329 EFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           + +M  LR  EGI +          L +   + LQ+QG ++      L  T+ G+ + DS
Sbjct: 357 DMIMTALRTCEGIDLSTLSAEYHTYL-MRLAKPLQQQGLLKE-DNGWLHLTRDGIYVSDS 414

Query: 389 VIANLA 394
           V+++L 
Sbjct: 415 VMSDLM 420


>gi|168702555|ref|ZP_02734832.1| coproporphyrinogen III oxidase [Gemmata obscuriglobus UQM 2246]
          Length = 383

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 112/377 (29%), Positives = 168/377 (44%), Gaps = 12/377 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC   C YCDF     +  +  E ++++   E+  +R+   PR + S+F GGGTP
Sbjct: 7   YVHVPFCAHHCGYCDFAVTAGQDHL-IELYLEAVGAELAGLRE---PRPVESLFIGGGTP 62

Query: 82  SLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           + +    +  +++ + +       +  E +IEANP S+           GVNR+S+GVQS
Sbjct: 63  THLSADQLRRLIETVTRWLPPGRGAGREFSIEANPDSLTEEKTAVMAALGVNRVSVGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              +SL  L R H       A+   R   P +SFDLI+  P  T+  W  +L  AL++  
Sbjct: 123 FRPESLAALDRRHAPEHIGRAVDAVRKHIPVVSFDLIFGAPGSTIEGWRADLDAALAFDP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT EKGT  +K    G +    E+  + +Y       +A G   YEISN +  
Sbjct: 183 QHVSTYGLTYEKGTPLWKRQTRGLVEAVPEDTELAMYEHAMDRLAAAGFEHYEISNFARP 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G    HN  YW    Y G G GA   V            +  + +++          ++E
Sbjct: 243 GYRCRHNERYWANDAYYGFGVGAARYVNGSRELNV----RDTKLYIRKALGGEDVTFQRE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLR 377
            L    +A E L   LR  +GI    +    G +LD        L R   I      R+R
Sbjct: 299 TLEPRARAFETLATQLRRADGIDRVPFRAQTGFDLDALAPVALALFRDHGIVTDDGHRVR 358

Query: 378 CTQRGMTMLDSVIANLA 394
            T+RG  + D+ +A L 
Sbjct: 359 LTRRGKCVADAAVAELL 375


>gi|304439649|ref|ZP_07399552.1| coproporphyrinogen III oxidase [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371889|gb|EFM25492.1| coproporphyrinogen III oxidase [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 373

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 117/378 (30%), Positives = 197/378 (52%), Gaps = 11/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+KKC YCDF S+    +   EN+ +  + EM           I+SIF GGG
Sbjct: 3   SIYIHIPFCIKKCNYCDFTSYSCISEENIENYFKYLIKEMGM---NPPKDEINSIFIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ + I  I + + K    + ++EIT+EANP+S+     + Y+  G+NRIS+GVQS
Sbjct: 60  TPSFVDSKYIEDIFNVLKKY-PWTEDIEITLEANPNSITKEKLKVYKDLGINRISMGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L+ +GR H  S+  +A    R   F  ++ DL+ ALP Q M   E  L+      
Sbjct: 119 FNEDILKKIGRVHKNSDTFSAAKNIREVGFKNLNLDLMLALPDQKMDDVEDSLREIEKLN 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L IE GT   K +++G    P+E +   +Y+         G H YEISN + 
Sbjct: 179 PEHISYYSLIIEPGTPMEKFYEEGRYTFPNEELDRKMYHRVVEGLENLGYHQYEISNFAK 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES+HNL YW+  +Y+G G  A S +    +    +   + + + +M+ +     + +
Sbjct: 239 SGYESVHNLRYWKIKEYLGYGLSASSSIGEYRY----TNTDNFKDYFEMIDEGRLPQIFR 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRL 376
           E L +  +  E+++MGLRL +G+ ++D E   G ++    +  +++  +    R++ +R+
Sbjct: 295 ERLKNIDRLHEYMIMGLRLNDGVDIEDAENRFGIDIKKYYKEEIEKNLKYKTIRMENNRI 354

Query: 377 RCTQRGMTMLDSVIANLA 394
             T  G  + + V  +  
Sbjct: 355 FLTDYGRDISNQVELDFM 372


>gi|312898010|ref|ZP_07757419.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera micronuciformis F0359]
 gi|310620935|gb|EFQ04486.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera micronuciformis F0359]
          Length = 373

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 193/379 (50%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFCV+KC YCDF S+        ++++++   E++    +    +  +++FGGG
Sbjct: 3   GLYVHIPFCVRKCLYCDFPSY-GGISSYLDDYVEALCREIRATSYI--GEAADTVYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +    I+  +   + + ++ EIT E NP  ++ +  +   K GVNRIS+G+QS
Sbjct: 60  TPSLLTARQGEKIMSALTDTFRIDADSEITFEVNPDGIKSDYIRDLIKIGVNRISMGIQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ L R H ++EA AA+   R      +S DLIY LP Q+    E + +  +   
Sbjct: 120 FDDRLLQLLRRVHTSAEAFAALEAVRTGGVTNVSADLIYGLPGQSPEDAETDARSLIELG 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H S Y L +E+GT+  ++ + G+++LP + V  +            GL  YEIS ++ 
Sbjct: 180 VTHASAYSLIVEEGTMLKRLVRKGEILLPEDRVTEEAGERVCHTLEKGGLKRYEISAYAA 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HNL YW+Y  YIG G  +HS           S+ ++ ++           + E 
Sbjct: 240 EGFQSKHNLKYWQYEPYIGFGASSHSFDGTYRFSNIRSLPEYIKN-----AGKTSVLAEH 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E +  E+  ++F  +GLR  +GI  K +E    R +         +L  +GF+E+ ++  
Sbjct: 295 ELIDKERGEEDFCFLGLRTMKGIDNKRFERCFKRTVTDAFGTVIEDLVLRGFLEKTEWGY 354

Query: 376 LRCTQRGMTMLDSVIANLA 394
              T +G+   + V +   
Sbjct: 355 -CLTSQGILYGNYVFSRFL 372


>gi|189347661|ref|YP_001944190.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           limicola DSM 245]
 gi|189341808|gb|ACD91211.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           limicola DSM 245]
          Length = 390

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 127/389 (32%), Positives = 186/389 (47%), Gaps = 9/389 (2%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E          L +YVH PFC ++C YCDF    R   +  + F ++   E      L  
Sbjct: 7   EKACGRDNEEPLSLYVHVPFCRRRCSYCDFFLVTRLDHI--DAFFKALAVETLAAAPLLR 64

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
            R + S+ FGGGTPSL+  + +A  LD  A   T +S+VEI +EANP     N     + 
Sbjct: 65  GRRVKSVHFGGGTPSLVPVRLLAGWLDLAASLCTFTSDVEIALEANPEDFGGNFMAELQA 124

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+NR+SLGVQS   + L  LGR H A EA      A N F  +S DLI  +P +T+ +W
Sbjct: 125 AGINRLSLGVQSFLSRKLSALGRLHTAGEASVITAEALNRFAAVSVDLICGVPGETLPEW 184

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +LQ ALS AV H+S+Y L++E  TL  +    G + +P E V   +Y     +    G
Sbjct: 185 SSDLQAALSLAVPHISVYMLSVEPKTLLQRSIAKGRVRVPDETVQALMYAAAIDVLGGSG 244

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN +  G +S +NL  W    Y+G GP AHS ++        +       +L  
Sbjct: 245 YRHYEVSNFALSGHDSRYNLACWMREPYLGFGPSAHSFMRNDGSERRWANAGTLLRYLDN 304

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA--GRNLDIECERNLQRQ 365
            ++    V  +E LS E +  E + + LR+  G+ V+        G NL    E  L R 
Sbjct: 305 PQE---CVAFEEILSEEDRFVEQVFLTLRINRGLDVEFLRKHNKLGLNLSTAAEEFLAR- 360

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G+I  ++  ++  T +G    D +     
Sbjct: 361 GWIV-IENGQIFLTGKGFLFADHIAGEFI 388


>gi|315609042|ref|ZP_07884012.1| coproporphyrinogen dehydrogenase [Prevotella buccae ATCC 33574]
 gi|315249246|gb|EFU29265.1| coproporphyrinogen dehydrogenase [Prevotella buccae ATCC 33574]
          Length = 372

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YC F S  R     +  +  +   EM+  R         +I+ GGG
Sbjct: 3   GLYIHIPFCESRCIYCGFYSTTRTGL--RRRYADALCREMEMRRGEMPGPP-DTIYLGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  + D I K +      EIT+E NP  V  +      +  VNR+S+G Q+
Sbjct: 60  TPSTLGGELLGRVFDYIYKVYGPCEG-EITLECNPDDVTDDFCHALARLPVNRVSMGAQT 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  LRFL R H+A+E + A+   R      +S DL++  P +T   W+ ++  AL   
Sbjct: 119 FSDARLRFLHRRHSAAEVVTAVERLRRADIRNISLDLMFGFPGETPADWQTDIDNALLLH 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L  E+GT  ++M   G++    E+V++ +Y++     +  G   YEISN + 
Sbjct: 179 PEHLSAYSLMYEEGTPLHRMLTRGEVEEIDEDVSLHMYDMLIDRLTTAGYEHYEISNFAL 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+G  AHS               + +++L+ +        E 
Sbjct: 239 PGHRSRHNSSYWHGVPYVGLGASAHSYSGTARSWNV----DNLQAYLEAIEAGRLP-SES 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSR 375
           E L    + ++ +   LR REGI++       G  L     +  Q Q   G + +     
Sbjct: 294 EKLDLTTRYNDLITTALRTREGIALDAMRAEFGPALYGYMMQQAQNQLALGLL-QTDGRS 352

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T++G+ + D+V+  L 
Sbjct: 353 LSLTRKGLYVSDAVMVELI 371


>gi|262364867|gb|ACY61424.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
          Length = 347

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 120/358 (33%), Positives = 196/358 (54%), Gaps = 17/358 (4%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           +  V  + +++  L ++     L   R IS+IF GGGTPSL+  + +  +LDG+     V
Sbjct: 2   KGDVPHQEYVEHVLADLDADVPLVSGREISTIFIGGGTPSLLSAEAMQQLLDGVRARLPV 61

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +S+ EIT+EANP +VE + F GY++AG+NRIS+GVQS   Q L  LGR H   EA  A  
Sbjct: 62  ASDAEITMEANPGAVEADRFSGYQRAGINRISIGVQSFSAQKLTRLGRIHGPDEARRAAE 121

Query: 163 LARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           LA ++  R  + DL++ LP QT+ +   +L++A++    HLS YQLTIE  T F      
Sbjct: 122 LATSLQLRSFNLDLMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP- 180

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
              +LP ++   D++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG G
Sbjct: 181 ---ILPDDDALWDIFQQGHQLLSAAGYLQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCG 237

Query: 282 AHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           AH ++     R+  +I+ KHP  +++     G  + ++  +++  +  EF M   RL E 
Sbjct: 238 AHGKITFNDGRILRTIKTKHPRGFMQ-----GKYLDKQYEVAAVDRPFEFFMNRFRLLEA 292

Query: 341 ISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               D+    G     +  + +  + ++  IE  ++   + T++G   L+S++  L +
Sbjct: 293 APRADFYHFTGLTESTIRPQLDEAIAKEYLIETTEY--WQITEKGKLFLNSLL-ELFL 347


>gi|270308162|ref|YP_003330220.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. VS]
 gi|270154054|gb|ACZ61892.1| oxygen-independent coproporphyrinogen III oxidase [Dehalococcoides
           sp. VS]
          Length = 378

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 190/384 (49%), Gaps = 14/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            NSL +Y+H+PFC+KKC YC F S+  R +    +++     E++     T      S++
Sbjct: 3   ENSLALYMHFPFCLKKCGYCSFVSYTNRLEH-ISDYVNCLQKEIKLR---TDGLCFHSLY 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+ P  IA I+ GI  +  +  + E+T+EANP  + +   +   + G+NR+SL
Sbjct: 59  FGGGTPSLLSPAQIADIISGIKTSARILPDAEVTLEANPGILTLQYLEQINRLGINRLSL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS  +  L  LGR HN ++A      AR   F  ++ DLIY LP  T+  ++  L   
Sbjct: 119 GIQSFSDAELAVLGRLHNTTQARDVYKKARAAGFDNINLDLIYGLPHSTLLSFKTNLNEV 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L  A +H+SLY LT+E+ T  Y   + G L      +A D Y L + +    G   YEIS
Sbjct: 179 LKLAPEHISLYGLTLEEDTPMYLQVQKGLLPFMDSEIAADQYQLAEEMLDNAGYRHYEIS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G +SLHNL YW+   Y+G+G   HS  +       I+++++   W    + N   
Sbjct: 239 NWAKPGYQSLHNLTYWQNRPYLGLGVAGHSFFQNCRTANDINLDEYLFCW----QNNCPP 294

Query: 315 -VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIER 370
              E   +    Q  E +++GLRL  G+S +  E   G    ++     +     G +E 
Sbjct: 295 EPSENIHVDLANQLAETIILGLRLDNGVSAEYVENRFGPCVMDVYYPQIQECVELGLLEE 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
                +R T RG  + + V     
Sbjct: 355 HD-RCIRLTPRGRLLSNEVFWRFL 377


>gi|218247390|ref|YP_002372761.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 8801]
 gi|218167868|gb|ACK66605.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8801]
          Length = 414

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 112/397 (28%), Positives = 186/397 (46%), Gaps = 24/397 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSI 71
               Y+H PFC ++C YCDF   V   K          ++++    E+  +        +
Sbjct: 14  PKSAYIHIPFCRRRCYYCDFPISVLGDKTDIYTASSITHYVEVLCQEI--LVTPFQGNGL 71

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P ++  IL  + + + + +N EI++E +P++  +   Q Y   G+N
Sbjct: 72  ETVFFGGGTPSLLPPNHLETILSTLDQKFGIFANAEISLEIDPATFTLEQLQRYHDLGIN 131

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+SLG Q+ ++  L   GR H   +   AI     +     S DLI  LP Q++  W   
Sbjct: 132 RVSLGGQAFQDNLLETSGRLHRVKDIFEAIDYIHKVGINNFSLDLISGLPNQSIEDWIFS 191

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A+  +  HLS Y L +E  T F K +K G   LPS+ +   +Y ++Q I +  G   
Sbjct: 192 LETAIKISPSHLSCYDLVLEPVTAFGKQYKPGKKPLPSDEITAKMYRISQKILTDAGYDH 251

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G + LHN  YW    Y G G GA S           + + + E W+  + K
Sbjct: 252 YEISNYAKPGYQCLHNRVYWENKPYYGFGMGAASYTNQQRFTRPRTRKDYYE-WVNKLSK 310

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGF 367
               +++ E  S      E LM+GLRL+EGI +     + G+ +    ++      +Q +
Sbjct: 311 TQ-GLIDCEVSSKTDFLLETLMLGLRLKEGIKLSFISDVFGKQISQKILDILAPFIKQSW 369

Query: 368 IERVQF---------SRLRCT-QRGMTMLDSVIANLA 394
           IE              R+  +   G    +++++ L 
Sbjct: 370 IELPPNSSLIHLENIDRISLSDPEGFLFSNTILSTLF 406


>gi|15673121|ref|NP_267295.1| coproporphyrinogen III oxidase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724101|gb|AAK05237.1|AE006346_6 oxygen-independent coproporphyrogen III oxidase [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406685|gb|ADZ63756.1| oxygen-independent coproporphyrinogen III oxidase [Lactococcus
           lactis subsp. lactis CV56]
          Length = 379

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 181/380 (47%), Gaps = 16/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y H PFC   C YCDF   +   +   + +I+S + E Q          + +I+ GGG
Sbjct: 7   SAYFHIPFCSHICYYCDFAKVLMTGQ-PIDAYIESLIEEFQS----FEIEKLRTIYIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  Q +  +L  IA+   +    E T+EANP  +     +    + VNRISLGVQ+
Sbjct: 62  TPSVLSAQQLERLLTAIAEQLDLEVLEEFTVEANPGDLSDEVIKVLADSAVNRISLGVQT 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR H   +   ++   +   F  ++ DLIYALP QTM   + ++++ L   
Sbjct: 122 FNNALLKKIGRTHTEVQVYDSVERLKKAGFENITIDLIYALPGQTMEMVKSDVEKFLELK 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H++LY L +E  T+F    + G L LPSE+   D+Y     I + +G + YE+SN   
Sbjct: 182 LPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAKNGYNHYEVSNFGL 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW   +Y GIG GA   +    ++    +  + ++            + +
Sbjct: 242 PGFESKHNITYWDNEEYYGIGAGASGYLAGIRYKNLGPVHHYLKA------APTEKRINE 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSR 375
           E LS + Q +E + +GLR + G+ V+ +E     + +    E    L  Q  +      R
Sbjct: 296 EVLSKKSQIEEEMFLGLRKKSGVLVEKFENKFKCSFEKLYGEQITELINQKLL-YNDRQR 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T +G  + ++V     +
Sbjct: 355 IHMTDKGFELGNNVFEKFLL 374


>gi|283777840|ref|YP_003368595.1| oxygen-independent coproporphyrinogen III oxidase [Pirellula
           staleyi DSM 6068]
 gi|283436293|gb|ADB14735.1| oxygen-independent coproporphyrinogen III oxidase [Pirellula
           staleyi DSM 6068]
          Length = 387

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 181/368 (49%), Gaps = 14/368 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A  + +  Q       YVH PFC  +C YC+F + +        +++++   E+ W   
Sbjct: 5   AAVVDRLEPQ---PRSAYVHVPFCRHRCGYCNF-TLIAGRDDLIGSYLEALALELSW--- 57

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++ ++F GGGTP+ + P+ +  +L+ + + + ++ + E ++EANP+ ++      
Sbjct: 58  LERSRAVDTLFLGGGTPTHLPPRELDRLLELVLRWFPLAEDAEFSVEANPADIDRERAAV 117

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
               GV R+SLG QS   + LR L R+H+A++   A+   +     +S DLI+  P +T+
Sbjct: 118 LASYGVTRVSLGAQSFRAEKLRVLERDHDAAQIARAVAECKRFASSVSLDLIFGTPGETL 177

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W+ +L +A++    H+S Y LTIEKGT F+   + G+L    E +   +Y       +
Sbjct: 178 DDWKSDLAQAIALTPQHVSTYGLTIEKGTPFFMRTERGELTKAGEELEAVMYETAIDTLA 237

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           A+G   YE+SN +  G    HN  YWR+  +   GPGA S +         S      ++
Sbjct: 238 ANGYEHYEVSNFARPGFACRHNQTYWRHQPFFAAGPGAASFLGGTRSVNHRSTT----TY 293

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           L  +R     + E E LS E  A E L+ GLR   G+   ++    G  ++    R L+ 
Sbjct: 294 LARLRAGESPIAESETLSPEDSARERLVFGLRQLGGVHRGEFLGATGYRIEQLGGRALEE 353

Query: 365 ---QGFIE 369
               G +E
Sbjct: 354 FLALGMLE 361


>gi|260060744|ref|YP_003193824.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Robiginitalea biformata HTCC2501]
 gi|88784874|gb|EAR16043.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Robiginitalea biformata HTCC2501]
          Length = 377

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 180/379 (47%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC + C YCDF+ S   ++K G    +++   EM+  R   G +   +++FGG
Sbjct: 3   GIYLHIPFCKQACHYCDFHFSTTLKHKQG---LLEAMELEMEQRRDELGGQPAETLYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    I  ++   A  + ++++ EIT+EANP  +     +    + VNR+S+G+Q
Sbjct: 60  GTPSLLTGAEIGQLIRRAAACFGLAADAEITLEANPDDLPPGRLEELALSPVNRLSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  E  LR++ R H+A EA+  +  A   F   S DLIY +P      W+  L+ AL + 
Sbjct: 120 SFHETELRWMNRAHSAREALECLEHAAARFANYSIDLIYGIPGSRPDDWKRTLEVALGFD 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y LT+E  T   +    G      ++ A + ++         G   YEISN   
Sbjct: 180 PPHISAYALTVEPDTALARFIDKGVTPGVDDHRAREDFSHLVETLQQAGYDHYEISNFGK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N  YW+   Y+GIGP AHS           S  K    +L+ V +      E 
Sbjct: 240 PGFHSRNNTAYWQGKSYVGIGPSAHSFDGGNRRWNVASNLK----YLRAVTEGKTYW-EA 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E LS+  + +E +M GLR + G+S        G        +       +G +   +   
Sbjct: 295 EQLSTRDRYNEAVMTGLRTQWGVSENRVGSEFGPRYAEYLRQQAAPYLEKGLLA-SRSGH 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T+ G  ++D + ++L 
Sbjct: 354 LVATEAGKFLVDGIASDLF 372


>gi|332184735|gb|AEE26989.1| Radical SAM family enzyme, putative coproporphyrinogen III oxidase,
           oxygen-independent [Francisella cf. novicida 3523]
          Length = 380

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 117/379 (30%), Positives = 188/379 (49%), Gaps = 15/379 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
              +G+Y+H+P+CV+KCPYCDFNSH  +      + + Q  + +          R + SI
Sbjct: 5   DKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSQQYYQKLIADFDTHLDDLQDREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  IAKN  +S+N EIT+E NP +VE      Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKLLQHIAKNAKISANCEITLEMNPGTVERGTILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKPP----KLPDEEILESIEIAGKQALAQAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDY+GIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYVGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIE 369
              + +   +S ++   EF++  LRL+ G  + ++E           +  +    +G +E
Sbjct: 297 DKFIKDSNIVSQDEVIYEFMLNALRLKNGFKLSEFEQQTFLPRSTINQQLKVGINKGLLE 356

Query: 370 RVQFSRLRCTQRGMTMLDS 388
                 ++ T +G   L+ 
Sbjct: 357 LNDNQ-IQPTAKGYLFLND 374


>gi|56751732|ref|YP_172433.1| coproporphyrinogen III oxidase [Synechococcus elongatus PCC 6301]
 gi|81301191|ref|YP_401399.1| coproporphyrinogen III oxidase [Synechococcus elongatus PCC 7942]
 gi|56686691|dbj|BAD79913.1| oxygen independent coprophorphyrinogen III oxidase [Synechococcus
           elongatus PCC 6301]
 gi|81170072|gb|ABB58412.1| coproporphyrinogen III oxidase, anaerobic [Synechococcus elongatus
           PCC 7942]
          Length = 396

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 114/391 (29%), Positives = 185/391 (47%), Gaps = 22/391 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSI 71
            +  Y+H PFC ++C YCDF   V   ++  +       ++ +   E+     L    ++
Sbjct: 5   PIAAYLHIPFCRRRCFYCDFPISVVGDRLRGDQSGMIRQYVDAICQEIAATPVLGP--AL 62

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P  +  IL  + + + +++  EI+IE +P+S + +     R+ G N
Sbjct: 63  QTVFFGGGTPSLLSPNQLDRILQTLDRRFGIAATAEISIEMDPASFDRSQAIATRQLGFN 122

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R+S+G Q+ ++  L   GR H  ++   A+  L    F  +S DLI  LP+QT+  W+  
Sbjct: 123 RVSIGAQAFQDGLLERCGRTHRRADIDRAVADLRAAGFENLSLDLISGLPEQTLADWQAS 182

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A++    HLS Y L +E  T+F K ++ GD  LP++     +Y L      A G   
Sbjct: 183 LEAAIALEPTHLSAYDLVLEPETVFGKRYQPGDRPLPADEQTAVMYRLAHRTLEAAGFEH 242

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK---M 307
           YEISN++  G +  HN  YW+   + G G GA S ++ G              WL+    
Sbjct: 243 YEISNYARSGFQCRHNRVYWQDQSFYGFGVGATSALQ-GQRFGRPRRRADYFIWLETPGA 301

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQR 364
           +      V             E LM+GLRL EG+     E   G  +        +  Q+
Sbjct: 302 IAAACAPVTS----DPADALAETLMLGLRLAEGLDWTALEQPFGAEILRSLQPVIQRYQQ 357

Query: 365 QGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
            G++ + Q  RL  T   GM   + V+A+L 
Sbjct: 358 AGWL-QWQGDRLSLTQPEGMLFSNQVLASLF 387


>gi|307611199|emb|CBX00844.1| hypothetical protein LPW_25481 [Legionella pneumophila 130b]
          Length = 370

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 123/376 (32%), Positives = 201/376 (53%), Gaps = 11/376 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H P+C++KCPYCDFNSH     + +  +IQ+ + +++        R I+SIF GGGTP
Sbjct: 2   YIHIPWCIRKCPYCDFNSHKSPDVLPEHQYIQALIEDLKTDISSYNTREINSIFIGGGTP 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           SL   +    + + + +    + N+EIT+EANP +VE + F  YR++G+NR+SLG+QS  
Sbjct: 62  SLFSAEAYNNLFNELKRILPFAKNIEITMEANPGTVEQHRFTDYRQSGINRLSLGIQSFN 121

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L+ LGR H+  +A +AI  AR   F  ++ D++++LP Q++TQ   +L+ ALSY  +
Sbjct: 122 PNHLKILGRIHDEKQAHSAIDTARKAGFDNLNLDIMHSLPNQSITQGLEDLKTALSYQPE 181

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS YQLTIE  T+FYK        LPSE     L     ++    G   YEIS  S   
Sbjct: 182 HLSWYQLTIEPNTVFYK----HTPPLPSEEEDYLLEEQGFALLHNSGYQRYEISAFSKPE 237

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            ++ HN+NYW +GDY+GIG GAH ++   +  +     + P+ +L         +  +E 
Sbjct: 238 KQARHNINYWLFGDYLGIGAGAHGKMTTPNAIIRTRKHRQPKDYLD---NEKPYLAARET 294

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQFSRLRC 378
           ++ ++   EF++   RL + I ++ +    G   N  +   +   ++  I     +  + 
Sbjct: 295 ITGKELLFEFMLNTTRLEQSIPLELFTTATGLELNQLLPLLKLANKKQLINLTD-THWQV 353

Query: 379 TQRGMTMLDSVIANLA 394
           T  G    + + A   
Sbjct: 354 TPLGRQYTNDLQALFL 369


>gi|282600334|ref|ZP_05973911.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rustigianii DSM 4541]
 gi|282565576|gb|EFB71111.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Providencia rustigianii DSM 4541]
          Length = 350

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 115/357 (32%), Positives = 187/357 (52%), Gaps = 15/357 (4%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           + ++ Q  +++  L ++     L G R + +IF GGGTPSL+  +++ +++DGI +   +
Sbjct: 2   KGEIPQVEYVEHLLHDLDSDVGLIGSRPVKTIFIGGGTPSLLSAKSMQMLMDGIRQRVNL 61

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
             + E+T+EANP +VE   F GY+ AG+NRIS+GVQS     L  LGR H   EA  A  
Sbjct: 62  DPDAEVTMEANPGTVEAERFAGYQAAGINRISIGVQSFGNDKLITLGRIHGPDEAKRAAK 121

Query: 163 LARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           LA N+  R  + DL++ LP QT  +   +L++A+  A  HLS YQLTIE  T F      
Sbjct: 122 LATNLHLRSFNLDLMHGLPSQTRDEGLSDLRQAIELAPPHLSWYQLTIEPNTQFGSRPP- 180

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
               LP ++   D+Y     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG G
Sbjct: 181 ---TLPDDDTLWDIYTEGHKLLSAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCG 237

Query: 282 AHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
           AH ++     ++  +++ KHP  +++     G  +  +  + +E +  E+ M   RL E 
Sbjct: 238 AHGKITSTDGQILRTVKTKHPRGYME-----GRYLDNRYNVENEDRPFEYFMNRFRLLES 292

Query: 341 ISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +   ++    G    +          +G+I        + T+ G   L+S++  L +
Sbjct: 293 MPRSEFTEYTGLPESVVRSAIDEALAKGYITETADE-WQITEHGKLFLNSLL-ELFL 347


>gi|238019348|ref|ZP_04599774.1| hypothetical protein VEIDISOL_01212 [Veillonella dispar ATCC 17748]
 gi|237864047|gb|EEP65337.1| hypothetical protein VEIDISOL_01212 [Veillonella dispar ATCC 17748]
          Length = 394

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 113/393 (28%), Positives = 196/393 (49%), Gaps = 13/393 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQL 65
           N +       +G+YVH PFC +KC YCDF ++ +  +   E ++ + + E+         
Sbjct: 6   NTLNLSALGDMGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEIDLWVTEHPE 64

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +  R I +I+FGGGTP+ +  Q + +I+D I   +T++ +  +TIE+NP  V++      
Sbjct: 65  SKSRPIDTIYFGGGTPTELSIQQLQMIVDKIKSTFTITDDCHMTIESNPGEVDLQYLTKL 124

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
              G NRIS GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+QT+
Sbjct: 125 VNLGFNRISFGVQTFDDKALTMLHRSHNGEKAKQAVYDAKEAGFTDINIDLIYGLPRQTL 184

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  L       ++H+S Y L +E GT  Y +     + +PSE +   +Y++  +   
Sbjct: 185 EDIQHNLDIVKDLPINHISTYGLQVEVGTYLYHLVDKNLISIPSETIDESMYDMMMAGLK 244

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G   YEISN S   + S HNL YW Y DY+G G GAHS        V  S  ++   +
Sbjct: 245 DLGFERYEISNFSKDNSYSRHNLKYWHYVDYLGFGAGAHSFYDG----VRRSNNRNVMPY 300

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERN 361
           ++ V +     ++ E ++ E+  ++F  + LR + G++   ++   G    NL      +
Sbjct: 301 IQAVDRYTMPTIDTETITVERAQEDFCFLALRTKWGLNEHTFKKRFGISVVNLFSTTLND 360

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L  +  +E  +      T  G    + V +   
Sbjct: 361 LVNKDLLEY-ENDSYHLTSEGAKHGNYVFSQFI 392


>gi|170079417|ref|YP_001736055.1| coproporphyrinogen III oxidase [Synechococcus sp. PCC 7002]
 gi|169887086|gb|ACB00800.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Synechococcus sp. PCC 7002]
          Length = 396

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 110/387 (28%), Positives = 184/387 (47%), Gaps = 16/387 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYK------VGQENFIQSFLTEMQWMRQLTGPRSISS 73
             Y+H PFC+++C YCDF   V   K         E + +    E++    L G   + +
Sbjct: 4   SAYLHLPFCLRRCFYCDFPITVTGEKQTAGIRTQMEEYGEWLCREIRATPILGG--ELKT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL     +  +L  + + + ++ + EI++E +P +  +     Y+  G++R+
Sbjct: 62  VFFGGGTPSLFPVDLLEKVLRTLDQRFGIAQSAEISLEIDPGTFSLEQLIRYKNIGISRL 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQ+ ++  L   GR+H       A           S DLI  LP QT   W+  L +
Sbjct: 122 SLGVQAFQDNLLANCGRSHRVINIFTACDHLERSQIPWSLDLISGLPDQTRDDWQASLDQ 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S Y L IE  T F K ++ G+  LPS+     +Y L   I    G   YEI
Sbjct: 182 AIALNPHHISCYDLVIEPQTPFGKQYEPGEGPLPSDENTAAMYRLASEILRQAGYDHYEI 241

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN++  G +  HN  YW    Y G G GA S  +        +  ++  +W++   +N +
Sbjct: 242 SNYAKPGYQCRHNRVYWENRPYYGFGMGAASFTQNQRFSRPRTRAEYY-TWVEQYEQN-N 299

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLD--IECERNLQRQG--FI 368
            V++   L+   +  E LM+GLRL EG+ +       G+ N+D  +E  +   ++G   +
Sbjct: 300 GVLDVAVLTKGDRLLETLMLGLRLTEGLDLSQLITEFGQSNVDQILEIIKPAFQKGWALL 359

Query: 369 ERVQFSRLRCT-QRGMTMLDSVIANLA 394
                 RL  +   G+   ++++A L 
Sbjct: 360 SPTTPPRLALSDPEGLLFSNTILAELF 386


>gi|227486722|ref|ZP_03917038.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227235310|gb|EEI85325.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 373

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 120/382 (31%), Positives = 198/382 (51%), Gaps = 14/382 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N +G Y+H PFC KKC YCDF +     +   E ++++ + E++  R+      I SI+ 
Sbjct: 2   NRVGAYIHIPFCEKKCYYCDFAAFP-NLEKWIEPYVENLIKEIRLYRERM-DVIIDSIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+ + I  I+  + K        E TIEANP S+++   + YR  G+NR+SLG
Sbjct: 60  GGGTPSYIDSKFIEKIIGEVYKFKH--DIKEFTIEANPKSLDMEKLKIYRDLGINRVSLG 117

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS + + L+ +GRNH +  AI  I + R   F  +SFDL+  LP Q  +  + +L    
Sbjct: 118 VQSFDNEVLKNIGRNHTSQIAIRDIEMIREAGFTNLSFDLMLNLPGQDFSSVKRDLDMVK 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               +H+S Y L ++KG+ FY + K G L L  +++ VD+++         GLH YE+SN
Sbjct: 178 KLKPNHISWYSLILDKGSKFYALDKQGKLSLMDDDLEVDIFSYLIDELEKVGLHRYEVSN 237

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN  YW    Y+G+G  A   +    +        +   + KM++ N   +
Sbjct: 238 FAKKGFESFHNKKYWNQEGYLGLGIAAAGYLSNLRYNNTP----NLAIYDKMLKANKLPI 293

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQ 372
           + K+F+   +   E+++  LR  EGI + +++   G +   +  R     +  GF E   
Sbjct: 294 INKDFIDKNENEKEYIIFKLRESEGIDLSEFKNRYGVDFLKKYARQISKFRDDGFFEI-- 351

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            S +R T++GM++ +     + 
Sbjct: 352 DSAIRFTKKGMSLSNEFFVEII 373


>gi|284053503|ref|ZP_06383713.1| coproporphyrinogen III oxidase [Arthrospira platensis str. Paraca]
 gi|291568296|dbj|BAI90568.1| coproporphyrinogen III oxidase, anaerobic [Arthrospira platensis
           NIES-39]
          Length = 429

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 116/414 (28%), Positives = 186/414 (44%), Gaps = 39/414 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPR 69
                 YVH PFC ++C YCDF  S V   + G+     + ++     E+   R      
Sbjct: 11  ETPTAAYVHIPFCRRRCYYCDFAVSVVGDRRHGENSGMIQEYVNFLCEEIVNQRHF--GL 68

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTPSL+  Q    ++  I+ +  ++S+ EI++E +P + ++   QG+  AG
Sbjct: 69  PLKTVFFGGGTPSLLSVQQFDRLMKTISDHLGIASDAEISVEMDPGTFDLGKLQGFVAAG 128

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
            NR+S+GVQ+ ++  LR  GR+H  ++   AI L   +     S DLI  LP QT    +
Sbjct: 129 ANRVSVGVQAFQDDLLRLCGRSHTVADIWRAIDLINQVGVVNFSIDLISGLPHQTPEMMQ 188

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L + LS    H+S Y L +E  T F + +K G+  LP +    +LY   Q   ++   
Sbjct: 189 ESLDQVLSINPAHVSHYDLIVEPQTAFGRYYKPGEFPLPDDQTTANLYRQAQKCLTS-RF 247

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN++  G E  HNL YW    Y G G GA S V         + +++ + WL+  
Sbjct: 248 KHYEISNYARPGFECRHNLVYWHNQPYYGFGMGAASYVGGYRLTRPRTRDRYYQ-WLRSS 306

Query: 309 ------------RKNGHAVVEKEFLS---SEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                                 E ++         E LM+GLRL  G+ +   +   G  
Sbjct: 307 GGGGASESWLVSDSADLPPAPTEAIAIILGSDILLETLMLGLRLASGVDLLRLQQQFGEV 366

Query: 354 LDIECERNLQ---RQGFIERV---------QFSRLRCT-QRGMTMLDSVIANLA 394
              +    L+    +G++E V             LR T   G    ++++A+L 
Sbjct: 367 AVSQITDILKPYGDRGWVEVVYTEEEPDKPAKRHLRLTDPEGFLFSNTILADLF 420


>gi|326336087|ref|ZP_08202259.1| putative coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325691596|gb|EGD33563.1| putative coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 377

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/383 (28%), Positives = 192/383 (50%), Gaps = 16/383 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             +Y+H PFC + C YCDF+      +  Q   I++   E++  ++    +++ +++ GG
Sbjct: 2   YSLYIHIPFCRQACHYCDFHFSTTLKRKPQ--MIKALCKELEMRKK-EASQTLQTVYLGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN----FQGYRKAGVNRIS 134
           GTPS++  + +  IL  I  ++TV  N EITIE NP    ++      +  ++ G+NR+S
Sbjct: 59  GTPSILTFEELNEILTTIHYHYTVDPNAEITIEINPDDFTLSKKGISLEQLKELGINRLS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  E+ LR + R H  S+A   +  A  +F  +S DLIY +P  +  +W   +  A
Sbjct: 119 IGIQSFFEEDLRLMNRAHTVSQAKELLAKAIGLFDNISIDLIYGIPNLSHKRWIENINIA 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS+ + HLS Y LT+E  T  Y+  K G +   +++ A + + L + I    G   YE+S
Sbjct: 179 LSFGIPHLSAYALTVEPKTALYQFIKKGKIPPTNDSQAREQFYLLKDILEKEGFIHYELS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G  S +N  YW    Y+GIGP AHS              K    ++K + +    
Sbjct: 239 NFGRKGYFSKNNTAYWEQKHYMGIGPSAHSYNGKERTWNIAHNIK----YIKQISEGILP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERV 371
              KE LS +   +E +M GLR+++GIS++  +   G       ++       +G +   
Sbjct: 295 -QGKEVLSLKDLYNERIMTGLRIQKGISLESIQQDFGEFYVTYLKKEAFPYIEKGLLIYY 353

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             + +  +++G+ + D + ++L 
Sbjct: 354 -NNHIITSKKGLFLSDGIASDLF 375


>gi|282850168|ref|ZP_06259547.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella parvula ATCC 17745]
 gi|282579661|gb|EFB85065.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella parvula ATCC 17745]
          Length = 399

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 112/385 (29%), Positives = 198/385 (51%), Gaps = 13/385 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTGPRSISS 73
             +G+YVH PFC +KC YCDF ++ +  +   E ++ + + E+         +  ++I +
Sbjct: 19  RDMGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEIDLWISEHPESTSKAIDT 77

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTP+ +  Q + +ILD I   +T++ +  +TIE+NP  V ++      + G NRI
Sbjct: 78  IYFGGGTPTELSIQQLQMILDKIKNTFTITDDCHMTIESNPGEVNLHYLTKLVELGFNRI 137

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+Q+    +  L 
Sbjct: 138 SFGVQTFDDKALTMLHRSHNGKQAKQAVYDAKEAGFADINIDLIYGLPRQSSDDIQHNLD 197

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                 ++H+S Y L +E GT  Y + +   + +PSE +   +Y++        G   YE
Sbjct: 198 IVKDLPINHISTYGLQVEVGTYLYHLVQKNLISIPSETIDEVMYDMMMDGLKELGFERYE 257

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +   + S HNL YW Y DY+G G GAHS        V  S  ++   +++ V +  
Sbjct: 258 ISNFAKANSYSRHNLKYWHYVDYLGFGAGAHSFYDG----VRRSNNRNVMPYIQSVDRYI 313

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
              ++ E ++ E+  ++F  + LR + G+  + +E   G    +L     ++L  +G +E
Sbjct: 314 MPTIDTETITLERAQEDFCFLALRTKWGLDEQKFEDKFGVSIHDLFATTLKDLVSKGLLE 373

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             Q +    T  G    + V +   
Sbjct: 374 -YQNASYHLTAEGAKHGNYVFSQFI 397


>gi|159897530|ref|YP_001543777.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890569|gb|ABX03649.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 424

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 187/423 (44%), Gaps = 54/423 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR---------------- 63
            +YVH PFC  +C YCDFN+   R +   + +I +    ++ M                 
Sbjct: 8   HLYVHIPFCQTRCAYCDFNTFANR-EDFMQRYIDALCLHLKRMASGETIADPTWPQVADG 66

Query: 64  --------------QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
                          L      +++F GGGTP+ +    +  ++  I +   ++   E+T
Sbjct: 67  PIPWASYQLHDLVGPLQQADLPATVFLGGGTPTALPLHLLEQLMQTIGQIIPLA-QAEVT 125

Query: 110 IEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-I 167
            EANP +V + N  +  R  G+NR+S+GVQ+L + +LR LGR H ASEA A+   AR   
Sbjct: 126 SEANPGTVLDHNYLRAMRSMGINRLSMGVQTLHDPTLRVLGRIHTASEAYASYQAARKVG 185

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  ++ D ++ LP Q   QW   L   + +  +H +LY L +E  T        G + +P
Sbjct: 186 FENINLDFMFGLPGQDTAQWRAMLNEIVGWDAEHFALYSLIVEPSTPLAAQVTAGRVSIP 245

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSF------------LGAESLHNLNYWRYGDY 275
           +++   ++Y     I  A G   YEISN +                 S HN+ YW   DY
Sbjct: 246 NDDATGEMYEAAMEILGAAGYGHYEISNWAKTQNSAFNPSERLPAYASRHNVAYWLNADY 305

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
           +G+G GAHS             ++  E + + V      +++ +    + +  E +MMGL
Sbjct: 306 LGVGAGAHSHW----RGWRWVDQRILEPFAQQVEHGQAPLIDIQVCEPQDRDFETIMMGL 361

Query: 336 RLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           RL  G+    ++   G +L  +       L  QG +E+   + +R T RG  + + VI  
Sbjct: 362 RLNCGLGFAHFQQRTGHDLLAQYQPIIEQLVGQGLLEQTTNA-IRFTPRGRMVGNQVIER 420

Query: 393 LAV 395
             +
Sbjct: 421 FLL 423


>gi|241667769|ref|ZP_04755347.1| coproporphyrinogen dehydrogenase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876313|ref|ZP_05249023.1| coproporphyrinogen III oxidase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842334|gb|EET20748.1| coproporphyrinogen III oxidase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 380

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 15/385 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      +++ +  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHAIKDDTYLSQDYYKKLIADFDTHLTDLQDREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL +   +  +L  I  N  ++ N EIT+E NP +VE  +   Y   G++RIS
Sbjct: 65  FIGGGTPSLFKADYLGKVLQHIKDNSKLNPNCEITLEMNPGTVERGSISDYANIGISRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS + + L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 VGVQSFQNKKLQLLGRIHNCDNVYTTIEEIKNSRISNFNIDIMHGLPNQSFEDGIFDISQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E     +    + +    G + YEI
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKPP----KLPDEETLEQIEITGKKLLQQAGYYQYEI 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S ++     S+HN NYW +GDYIGIG GAHS++              KHP+ + +     
Sbjct: 241 SAYAKDNLRSIHNSNYWNFGDYIGIGAGAHSKITNLQTKEIKRTWKHKHPKIYSQA---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIE 369
            + + +   +S +    EF++  LRLR+G S   +E     + D      +    +G + 
Sbjct: 297 DNFIKDSNVVSQDDLVYEFMLNTLRLRDGFSFDLFERQTFLSKDTIQNNLQVAIDRGLL- 355

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           +V    ++ T +G   L+  I    
Sbjct: 356 KVNKDNVKPTDKGYLFLNDCINTFI 380


>gi|160895333|ref|ZP_02076104.1| hypothetical protein CLOL250_02892 [Clostridium sp. L2-50]
 gi|156863026|gb|EDO56457.1| hypothetical protein CLOL250_02892 [Clostridium sp. L2-50]
          Length = 404

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 117/399 (29%), Positives = 191/399 (47%), Gaps = 23/399 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH------VRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
             L +Y+H PFCVKKC YCDF S       + R    ++ ++QS   E+   + ++    
Sbjct: 3   KKLSIYIHIPFCVKKCVYCDFLSFGADDPQINRSGAVRKAYVQSICRELLSYKSISKDYI 62

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +IF GGGTPS++ P  I  IL  +   + V    EITIE NP ++       Y  AG+
Sbjct: 63  VKTIFIGGGTPSILLPGEIMNILATLRSIFKVDEEAEITIEVNPGTLTAIKAAEYLAAGI 122

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+QS     L  LGR H   + + +   AR+  F  ++ DLI A+P QT+  +  
Sbjct: 123 NRMSIGLQSAHNDELAMLGRIHTYEQFLTSYQTARDAGFRNINVDLISAIPGQTLHSYLD 182

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+R L    +H+S Y L +E GT      K     LP E    ++Y  T  +    G  
Sbjct: 183 TLERVLKCRPEHISSYSLIVEDGTPLAGDQKLLS-KLPDEETDREMYEATGKVLEMSGYK 241

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES----WL 305
            YEISN++  G E  HN+ YW   +YIGIG GA S      +     I+++ ++    + 
Sbjct: 242 RYEISNYAKPGYECRHNIVYWTMDEYIGIGIGAASFFNGRRYSNTSDIKQYVDTMEEVFE 301

Query: 306 KMVRKNGHAVVE-------KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-- 356
           K      + + E        E +  +   +E+++ GLR+  GIS  D+    G +L    
Sbjct: 302 KRSIDEAYRIPELLSIRHIDETVDIDTLMEEYVIFGLRMTRGISAADFYERFGHSLYDVY 361

Query: 357 -ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +  R     G + + +   +  T++G+ + + ++ +  
Sbjct: 362 GDIIRGYVASGHM-KDEKGMVCFTRKGIDVSNRILVDFL 399


>gi|255534472|ref|YP_003094843.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Flavobacteriaceae bacterium
           3519-10]
 gi|255340668|gb|ACU06781.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Flavobacteriaceae bacterium
           3519-10]
          Length = 406

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 108/377 (28%), Positives = 185/377 (49%), Gaps = 9/377 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC+F  H       ++  + +   E+   +     + + S++FGGGT
Sbjct: 33  IYLHIPFCKQKCSYCNF--HFSTSLKHKDEMMAAMKKEIFLRKDELDSKILKSLYFGGGT 90

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++    +  ++D + K +   S++EIT+EANP  ++    +G  +  +NR+S+G QS 
Sbjct: 91  PSILGADELKSVIDEVLKFFEFDSDIEITLEANPDDLDATFLKGISQTPINRLSIGTQSF 150

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L+ + R HNASEA  +I  A++  F  +S DLIY  P      W+  L  AL+  V
Sbjct: 151 FNDDLKMMNRAHNASEAEGSIKRAQDFGFENISIDLIYGSPTSDFEIWKQNLNMALALEV 210

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   +  +   +  P E    + +         HG   YEISN    
Sbjct: 211 PHISAYALTVEPKTALNQWIQQNKIQAPKEAEQTEEFYYMSDFLKNHGFDHYEISNFGKP 270

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HN  YW+  +Y+G+GP AHS               + + ++  + +N     E E
Sbjct: 271 GFHSQHNSAYWKSHEYLGLGPSAHSY---NGGNERSWNIANNQLYINSLNQNKLP-KETE 326

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--GFIERVQFSRLR 377
            LS  +Q +E +M+GLR   G+ + D     G ++    E+  +++    I  V+ + LR
Sbjct: 327 VLSESEQFNEMMMIGLRTLTGVDLADLNNRFGDDVRQHLEKETKQRIADGILTVENNHLR 386

Query: 378 CTQRGMTMLDSVIANLA 394
             ++   + D + +++ 
Sbjct: 387 IPEKHWFLADGIASDVF 403


>gi|118498189|ref|YP_899239.1| coproporphyrinogen III oxidase, anaerobic [Francisella tularensis
           subsp. novicida U112]
 gi|254374997|ref|ZP_04990477.1| coproporphyrinogen III oxidase [Francisella novicida GA99-3548]
 gi|118424095|gb|ABK90485.1| coproporphyrinogen III oxidase, anaerobic [Francisella novicida
           U112]
 gi|151572715|gb|EDN38369.1| coproporphyrinogen III oxidase [Francisella novicida GA99-3548]
          Length = 380

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 195/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNYENIYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKPP----KLPDEEILESIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|229495212|ref|ZP_04388947.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas endodontalis ATCC 35406]
 gi|229317655|gb|EEN83553.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas endodontalis ATCC 35406]
          Length = 399

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 125/402 (31%), Positives = 196/402 (48%), Gaps = 32/402 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
           G+Y+H PFC  +C YC F S     +  QE F+ +   E++  R+   P  SI +++FGG
Sbjct: 3   GLYLHVPFCKSRCAYCAFYSQTNTRQ--QEAFVAALCRELELRREELAPSISIETVYFGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  I+D I + ++   + E T+E NP  +        R    NR+SLGVQ
Sbjct: 61  GTPSLLSPSQLEKIVDTIRRVYSPEPDAEWTLEGNPDDLTPEYAHALRLLRFNRVSLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ LRFLGR H A +  +AI   R   F  +S DLIY+LP Q+   W+  L  AL  
Sbjct: 121 SFCDEELRFLGRRHTARQVYSAIEALRTADFSNISIDLIYSLPGQSHQLWQQNLSSALVL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y LT E+ T    + + G +   S+  A+  Y          G   YE+SN +
Sbjct: 181 EIPHISAYNLTYEEHTRLTHLARRGSIEKQSDEDALRDYYYLVDTLHGRGYDHYELSNFA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F G  S HN +YW    Y+G GP AHS +    +        H   +++ +++   A+  
Sbjct: 241 FRGMHSRHNSSYWDRVPYLGFGPSAHSYLPESRYANVA----HLHRYIEYLQQGTTAIDF 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFI------ 368
           +E LS     +E +M GLR  +G+ +++   + GR   +           QG +      
Sbjct: 297 REDLSPTDCFNEIIMTGLRRAKGVDLQNVSEVFGRKKLSFLQTASEPYLAQGLLILDSSS 356

Query: 369 -------------ERV--QFSRLRCTQRGMTMLDSVIANLAV 395
                        ERV  +   LR ++ GM ++DS+I++L +
Sbjct: 357 QYSIEAPSPSICKERVANEGQFLRASREGMVVIDSIISDLFL 398


>gi|332678923|gb|AEE88052.1| Radical SAM family enzyme, putative coproporphyrinogen III oxidase,
           oxygen-independent [Francisella cf. novicida Fx1]
          Length = 380

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 195/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKPP----KLPDEEILESIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|300866348|ref|ZP_07111049.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
 gi|300335653|emb|CBN56209.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
          Length = 436

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 117/409 (28%), Positives = 195/409 (47%), Gaps = 40/409 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG-------------QENFIQSFLTEMQWMRQLT 66
             Y+H PFC ++C YCDF   V     G              + ++     E+       
Sbjct: 25  SAYLHIPFCRRRCFYCDFPVSVVGDAYGGRNPRKNSEDSGTIQEYVTVLCREIALSAGFC 84

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
              S+ ++FFGGGTPSL+    ++ IL+ + + + +++  EI++E +P +  +   QGY+
Sbjct: 85  Q--SLQTVFFGGGTPSLLSVSQLSRILEALDRQFGIAAEAEISMEIDPGTFSLEQLQGYK 142

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
            AGVNR+SLGVQ+ +++ LR  GR+H  ++   A+ L +       S DLI  LP Q++ 
Sbjct: 143 AAGVNRVSLGVQAFQDELLRVCGRSHCVADIYEAVDLVQKAEITNFSLDLISGLPHQSLE 202

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           QW++ L  A++ A  HLS Y L +E  T F +  + G   LP++  A  +Y L Q I + 
Sbjct: 203 QWQLSLAAAVAIAPAHLSCYDLVLEPVTAFGRYFQSGIEPLPADETAAQMYRLAQQILTE 262

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN++  G +  HN  YW    Y G G GA S ++     V ++  +  + + 
Sbjct: 263 AGYEHYEISNYARPGYQCRHNRVYWENRPYYGFGMGAASYLQG----VRLTRSRTRKEYY 318

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNL 362
           + V  +    V    ++S     E +M+GLRL +G+S++      G N   +   C +  
Sbjct: 319 QWVEDSTSVKVAATPMTSHDVLLETVMLGLRLAQGVSLEAIAQKFGENTLEKIWTCLQPY 378

Query: 363 QRQGFIERVQF----------------SRLRCT-QRGMTMLDSVIANLA 394
            RQ ++E                      LR +   G    ++++A L 
Sbjct: 379 YRQKWVEIAGDNGLLLNLRDGEKLPSCGYLRLSDPEGFLFSNTILATLF 427


>gi|315654881|ref|ZP_07907786.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 51333]
 gi|315490842|gb|EFU80462.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 51333]
          Length = 469

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 122/468 (26%), Positives = 188/468 (40%), Gaps = 92/468 (19%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQ--------- 64
              +L  YVH P+C+++C YCDFN++       G   +  + L E+    +         
Sbjct: 3   SPRTLSAYVHVPYCLRRCGYCDFNTYSNLSLGPGVGGYAAALLREIGLYARDCSGAVAVC 62

Query: 65  -------------------------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
                                        R+++S+FFGGGTP+++   ++  +L G+ + 
Sbjct: 63  PDGGHKGGGHEGGAGVVGAGGTGAGRQDGRALTSVFFGGGTPTVLPATDLVRVLRGLNQT 122

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           + +  + E+T EANP +V   +       G  R+S G+QS     L  L R H     +A
Sbjct: 123 FGLEPDAEVTTEANPDTVTPEDLDTLVAGGFTRVSFGMQSAVPAVLATLNRTHQQKHLVA 182

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            +  A +    +S DLIY  P +T+  W   L  AL   VDH+S Y L IE GT   +  
Sbjct: 183 GVQAAHSRGLEVSVDLIYGTPGETLADWRASLDAALELGVDHVSCYALVIEPGTALGRAL 242

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
             GD+     +   D Y L   + SA GL  YEISN +  G E  HNL YWR  D+ G G
Sbjct: 243 AQGDIPPVDPDDQADKYELADEVLSAAGLQWYEISNWALPGHECRHNLAYWRDQDWYGFG 302

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
           PGAHS +            +HP  W++ V+     V  +E ++ +    E L++ LRLR+
Sbjct: 303 PGAHSHLGSTRFWNL----RHPAKWMQSVQSGRRPVDGQEIVTGDSARLERLLLNLRLRQ 358

Query: 340 GISVKDWEMLAGRNLDIEC--ERNLQRQGFIE---------------------------- 369
           G+ + ++    G +          L  +G +E                            
Sbjct: 359 GLDLGEYAREFGVDPAALLFEAHELAGEGLLEGGALLPEDATPSDYELAPKGGSLSVGQC 418

Query: 370 -----------------------RVQFSRLRCTQRGMTMLDSVIANLA 394
                                       R   T+RG  + D+VI  LA
Sbjct: 419 SQGDGLPHQNELLHQDGSVTDTLTSNAGRAVLTRRGRLLADTVIQRLA 466


>gi|262039168|ref|ZP_06012488.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia goodfellowii F0264]
 gi|261746784|gb|EEY34303.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia goodfellowii F0264]
          Length = 383

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 114/382 (29%), Positives = 191/382 (50%), Gaps = 32/382 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF + +   +   E + ++ + E++   +        +++FGGG
Sbjct: 27  ALYLHIPFCEKKCEYCDFCTFINMSREY-EKYTKALIKELKMYPEY----EYDTVYFGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +  A I+  I        N EIT+E NP+ +     +  RK G+NR+S+G+QS
Sbjct: 82  TPSLLPVEMTAEIMSNIRY----KENSEITLELNPNDMTAEKLKELRKTGINRLSIGIQS 137

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+F+GR H+  +A+     AR   F  +S DL++ +P Q+    + +L+  L  +
Sbjct: 138 FQNHVLKFIGRLHSGEDAVRVFRDARKAGFENISIDLMFGIPNQSFEDLKKDLENILLLS 197

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D++S+Y L  E+GT+F+   K G L    +++  ++Y         +G   YEISN S 
Sbjct: 198 PDNISIYSLIWEEGTVFWSKLKKGILSEMDQDLEAEMYEEIIDFLKKNGYSHYEISNFSK 257

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G   +HNL YWR  ++IG+G  A +      +    +  K    + K + +N   V EK
Sbjct: 258 KGRGGIHNLKYWRNKEFIGVGLSAATYFNGKRYSNVRTFNK----YYKSLEENILPVDEK 313

Query: 319 --EFLSSEQQADEFL--MMGLRLR-EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
             E +   ++  E L  M+GLRL  EGI          +    E   +L  +G +ER   
Sbjct: 314 SVEIIDETEK--EKLKNMLGLRLTEEGI----------KYFQNEKVESLLERGLLERFDS 361

Query: 374 S-RLRCTQRGMTMLDSVIANLA 394
             R+R T++G+ + + V     
Sbjct: 362 GKRMRLTRKGILLANEVFVEFI 383


>gi|257061275|ref|YP_003139163.1| coproporphyrinogen III oxidase [Cyanothece sp. PCC 8802]
 gi|256591441|gb|ACV02328.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8802]
          Length = 414

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 112/397 (28%), Positives = 187/397 (47%), Gaps = 24/397 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ------ENFIQSFLTEMQWMRQLTGPRSI 71
               Y+H PFC ++C YCDF   V   K          ++++    E+  +        +
Sbjct: 14  PKSAYIHIPFCRRRCYYCDFPISVLGDKTDIYTASSITHYVEVLCQEI--LVTPFQGNGL 71

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P ++  IL  + + + + +N EI++E +P++  +   Q Y   G+N
Sbjct: 72  ETVFFGGGTPSLLPPNHLETILSTLDQKFGIFANAEISLEIDPATFTLEQLQRYHDLGIN 131

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+SLG Q+ ++  L   GR H   +   AI     +     S DLI  LP Q++  W   
Sbjct: 132 RVSLGGQAFQDNLLETSGRLHRVKDIFEAIDYIHKVGINNFSLDLISGLPNQSIEDWIFS 191

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A++ +  HLS Y L +E  T F K +K G   LPS+ +   +Y ++Q I +  G   
Sbjct: 192 LETAINISPSHLSCYDLVLEPVTAFGKQYKPGKKPLPSDEITAKMYRISQKILTDAGYDH 251

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G + LHN  YW    Y G G GA S           + + + E W+  + K
Sbjct: 252 YEISNYAKPGYQCLHNRVYWENRPYYGFGMGAASYTNQQRFTRPRTRKDYYE-WVNKLSK 310

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGF 367
               +++ E  S      E LM+GLRL+EGI +     + G+ +    ++      +Q +
Sbjct: 311 TQ-GLIDCEVSSKTDFLLETLMLGLRLKEGIKLSFISDVFGKQISQKILDILAPFIKQSW 369

Query: 368 IERVQF---------SRLRCT-QRGMTMLDSVIANLA 394
           IE              R+  +   G    +++++ L 
Sbjct: 370 IELPPNSSLIHLENIDRISLSDPEGFLFSNTILSTLF 406


>gi|225848118|ref|YP_002728281.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643601|gb|ACN98651.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 367

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 115/377 (30%), Positives = 189/377 (50%), Gaps = 15/377 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S V      +E ++ +   E+   + L     + +++FGGG
Sbjct: 4   GLYIHIPFCEIKCPYCDFTSFVWNEDSLKEKYVSTLKKELSLYQNL--DFELETVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS + P  +   +  I +N      +EIT+E NP +    +F+  + AGVNRIS+G QS
Sbjct: 62  TPSSLSPDLLVDTIQFIKENTKTKKELEITVEVNPKTYRYKDFKILKDAGVNRISIGNQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++L  LGRNH   + +  +    N     ++ DLIY +  QT+   E +L+   S  
Sbjct: 122 FIEKNLISLGRNHKPKDTLQTVEDCLNAGITNINLDLIYGIQGQTLDDLEEDLKIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT  +GT    + K+G   LP E   + ++ L  S     G   YE+SN + 
Sbjct: 182 ITHISAYMLTPYEGTPLGTLVKNGCYNLPDEETTLKMFELIDSFLEEKGFERYELSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++GIG  + S V      V     K+ + +L +V K+   V  K
Sbjct: 242 EGYECKHNLFYWTDIEFLGIGVSSWSYVNN----VRFGNTKNIQEYLNLVEKSIKPVKFK 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  E++ +E + + LRL+ G+ +   +         +  + L  +G+   V+  +L  
Sbjct: 298 EELDQEKKIEEKIFLSLRLKSGLDLNLIKNK-------DIIKELVEEGY-ATVKNEKLTL 349

Query: 379 TQRGMTMLDSVIANLAV 395
             +G+ +L+ +   L +
Sbjct: 350 LPKGIMVLNEITVKLVL 366


>gi|89257040|ref|YP_514402.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica LVS]
 gi|115315393|ref|YP_764116.1| coproporphyrinogen oxidase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|167009425|ref|ZP_02274356.1| coproporphyrinogen oxidase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|169656754|ref|YP_001429312.2| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|254368282|ref|ZP_04984301.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica 257]
 gi|254369877|ref|ZP_04985886.1| hypothetical protein FTAG_01637 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290953678|ref|ZP_06558299.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295312995|ref|ZP_06803704.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica URFT1]
 gi|89144871|emb|CAJ80214.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica LVS]
 gi|115130292|gb|ABI83479.1| coproporphyrinogen oxidase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254091|gb|EBA53185.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica 257]
 gi|157122847|gb|EDO66964.1| hypothetical protein FTAG_01637 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|164551822|gb|ABU62357.2| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. holarctica FTNF002-00]
          Length = 380

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 195/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKRP----KLPDEEILESIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|187931038|ref|YP_001891022.1| coproporphyrinogen III oxidase, anaerobic [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|187711947|gb|ACD30244.1| coproporphyrinogen III oxidase, anaerobic [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 380

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 195/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLNDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKRP----KLPDEEILKSIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|254373533|ref|ZP_04989020.1| coproporphyrinogen III oxidase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571258|gb|EDN36912.1| coproporphyrinogen III oxidase [Francisella novicida GA99-3549]
          Length = 380

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 194/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL +   +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAAYLDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKPP----KLPDEEILESIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|168333686|ref|ZP_02691941.1| coproporphyrinogen III oxidase [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 374

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 196/380 (51%), Gaps = 14/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KC YCDF S        ++ ++ + + E++   +    R I++IF GGG
Sbjct: 4   GLYVHIPFCQSKCYYCDFLSIA--DNSLEDVYVSALVEELKRYSRKVK-RKINTIFIGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    ++ I + I  N+ +  ++E TIE NP ++  ++ Q  +   +NR+SLG+QS
Sbjct: 61  TPTALSVNLLSKICEVIEDNFILDKDIEWTIEVNPGTLTKSHLQIIKNTSINRVSLGLQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ +GR H   +    I  L       ++ DL++ALP QT+  W+  L R   Y 
Sbjct: 121 SCNNLLKKIGRIHTFEDWENTINDLLGIGITNINTDLMFALPSQTLHDWKCTLARVSQYP 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +EK T  Y  +K+G  ++ SE+V   +Y   + I S++G   YEISN + 
Sbjct: 181 ITHISAYALILEKNTKLYNDYKNGLFLITSEDVDRQMYATAKEILSSYGFFQYEISNWAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +  HN+ YW   +YIG+G GA   +      +  +     + +++ +      + E+
Sbjct: 241 NGYKCKHNILYWTLDEYIGVGLGASGYLNN----IRYTNTDDLKKYIQGIDHGTDIIKEE 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL----QRQGFIERVQFS 374
           + ++++   +EF+ +GLR+  GI  KD++   G+N++      +      +  IE    +
Sbjct: 297 DVITNKMSMEEFMFLGLRMIRGICKKDFKNRYGKNIEEIYGYEINXWKNEKALIE--NET 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T  G+ + ++V  +  
Sbjct: 355 NIYLTNFGIDISNTVFTSFL 374


>gi|134301299|ref|YP_001121267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|134049076|gb|ABO46147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. tularensis WY96-3418]
          Length = 380

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 195/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCKNVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF          LP E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKRP----KLPDEEILESIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|258648598|ref|ZP_05736067.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella tannerae ATCC 51259]
 gi|260851383|gb|EEX71252.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella tannerae ATCC 51259]
          Length = 368

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 197/375 (52%), Gaps = 11/375 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  +C YCDF S   +    +E + ++ + E++         +  +I+FGGG
Sbjct: 3   GLYVHVPFCASRCIYCDFYS-TTQTTEQRERYTKALIDEIKARAGR-WDDTFQTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    ++ I+  I     +S + EIT EANP  +  N  +  +  G+NRISLGVQ+
Sbjct: 61  TPSQLSIAEVSHIITAIQSLLHISPSAEITFEANPDDINENYVKQLKSLGINRISLGVQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L FL R H A EA  A+     I   +S DLIY LP QT++ W  +++RAL   +
Sbjct: 121 FDDARLHFLRRRHTAKEAAKAVETISTIIENVSLDLIYGLPNQTLSDWATDIRRALQLPI 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLS Y LTIE+GT  +++ +   +    E++   +Y +    T   G+  YEISN ++ 
Sbjct: 181 KHLSSYALTIEEGTPLFQLQQKQIIKEVKEDITRAMYEMLMLQTEQAGMQHYEISNFAYP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HN NYW    Y+G+GPGAHS            +  + +         G  + + E
Sbjct: 241 TYHSQHNHNYWLGLPYLGVGPGAHSYKGHTRRWNKGDLNYYLQH-------PGQPLFDFE 293

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L+ ++  +E L++ LR +EG+S+ + +    RN  +       +QG++  ++ + L  +
Sbjct: 294 QLNEDEHFNEMLLLRLRTKEGLSLNELKPQ-DRNYLLSVASPFIKQGYLHFLREN-LHVS 351

Query: 380 QRGMTMLDSVIANLA 394
           + G+ + D +I++L 
Sbjct: 352 KHGIFISDYIISSLM 366


>gi|113474963|ref|YP_721024.1| coproporphyrinogen III oxidase [Trichodesmium erythraeum IMS101]
 gi|110166011|gb|ABG50551.1| coproporphyrinogen III oxidase, anaerobic [Trichodesmium erythraeum
           IMS101]
          Length = 421

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 121/402 (30%), Positives = 196/402 (48%), Gaps = 31/402 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFN-SHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSISS 73
             YVH PFC ++C YCDF  S V   K G      + +++    E+   +    P  + +
Sbjct: 13  SAYVHIPFCRRRCYYCDFPISVVGDGKKGDNFSPIQEYVEVICQEISTTKSFDQP--LKT 70

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPSL+    ++ ILD + + + + +N EI+IE +P + ++   QGY+  GVNR+
Sbjct: 71  IFFGGGTPSLLSVGQLSRILDALEQKFGIVANAEISIEMDPGTFDLEQVQGYKFLGVNRV 130

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ ++  L+  GR HN S+   A++          S DLI  LP QT+ QW++ L 
Sbjct: 131 SLGVQAFQDDLLQVCGRLHNVSDIYKAVNTLHQAGIINFSIDLISGLPHQTLEQWQISLL 190

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++ +  H+S Y L +EK T F   +K G   LP++  A ++Y + Q + S  G   YE
Sbjct: 191 SGIAISPTHISSYDLVLEKVTAFGHYYKPGHAPLPTDETAAEMYRIAQQLISISGYEHYE 250

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN++  G +  HN  YW    Y G G GA S ++        + +K+ +  L    ++ 
Sbjct: 251 ISNYAKQGYQCSHNRVYWENHPYYGFGMGAASYLEGQRFTRPRTRKKYYQWVLSF--QDH 308

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
               +    S++    E LM+G RL +GI+V       G+      +   +  Q+ G++E
Sbjct: 309 SLESQGINASNQDFLLETLMLGFRLAQGINVLTLSQQFGQKTVEKLLIYLQPYQKLGWVE 368

Query: 370 RVQ----------------FSRLRCT-QRGMTMLDSVIANLA 394
            +                    LR T   G    ++V++ L 
Sbjct: 369 FINQKGVATPFSDNQKLPIEGHLRLTDPEGFLFSNTVLSTLF 410


>gi|315224306|ref|ZP_07866140.1| coproporphyrinogen dehydrogenase [Capnocytophaga ochracea F0287]
 gi|314945696|gb|EFS97711.1| coproporphyrinogen dehydrogenase [Capnocytophaga ochracea F0287]
          Length = 383

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 16/384 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             +Y+H PFC + C YCDF  H       +   + +   E+   +       + +I+ GG
Sbjct: 2   YSLYIHIPFCRRACYYCDF--HFSTTLKRKGEMVNALCEELILRKGEAVGSELQTIYLGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-----EVNNFQGYRKAGVNRI 133
           GTPS++    +  +   I  ++ V++  EIT+EANP             +  R  G+NR+
Sbjct: 60  GTPSILSYDELQQLFRTIFTHYKVNTTAEITLEANPDDFFRATSPEQFLEQLRSLGINRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS  E+ LR + R H  S+    + +A   F  ++ DLIY +P+ +  +W+  + +
Sbjct: 120 SLGVQSFFEEDLRLMNRVHTVSQVETLLQIAPQYFNNITIDLIYGIPQMSEERWQENINK 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+ + H+S Y LT+E+ T  +K    G +   S+  A   + +      A G   YE 
Sbjct: 180 ALSFDIPHISAYALTVEEKTALHKFIATGKIAPISDEQAYTHFQMLIDTLEAEGFIQYEF 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G  S +N  YW    Y+GIGP AHS              K    +++ +++   
Sbjct: 240 SNFGKEGYFSRNNTAYWFGKPYMGIGPSAHSFNGKERSWNIAHNIK----YIQQIQQGIL 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
              EKE L+   + +E ++  +R   GI +++   + G        +  Q+      +  
Sbjct: 296 P-QEKEELTLNNRYNELIITRIRTMVGIDLEEVRTVFGEGYRQYLLQQAQKYLADELLV- 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           ++ + L+ T++G  + D + ++L 
Sbjct: 354 IEENHLKVTRKGRFLSDGIASDLF 377


>gi|56707262|ref|YP_169158.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110669732|ref|YP_666289.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC198]
 gi|224456318|ref|ZP_03664791.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|254369945|ref|ZP_04985953.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254874096|ref|ZP_05246806.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|56603754|emb|CAG44717.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110320065|emb|CAL08100.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC198]
 gi|151568191|gb|EDN33845.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis FSC033]
 gi|254840095|gb|EET18531.1| oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|282158373|gb|ADA77764.1| Oxygen-independent coproporphyrinogen III oxidase [Francisella
           tularensis subsp. tularensis NE061598]
          Length = 380

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 194/380 (51%), Gaps = 17/380 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  +G+Y+H+P+CV+KCPYCDFNSH  +      E + Q  + +          R + SI
Sbjct: 5   NKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISI 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL + + +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRIS
Sbjct: 65  FIGGGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRIS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQS ++  L+ LGR HN       I   +N      + D+++ LP Q+      ++ +
Sbjct: 125 LGVQSFQDDKLKILGRIHNCENVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQ 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A++    H+S YQLTIE  TLF           P E +   +    +   +  G   YE+
Sbjct: 185 AIAMQPTHISWYQLTIEPNTLFAAKRPKF----PDEEILESIEIAGKEALAHAGFKQYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKN 311
           S  +     S+HN NYW +GDYIGIG GAHS++          +   KHP+ + +     
Sbjct: 241 SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT---- 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
              + +   ++ ++   EF++  LRL+ G  + ++E     + +I   + LQ    +G +
Sbjct: 297 DKFIKDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLL 355

Query: 369 ERVQFSRLRCTQRGMTMLDS 388
           E +  ++++ T +G   L+ 
Sbjct: 356 E-LNANQIKPTAKGYLFLND 374


>gi|312889837|ref|ZP_07749383.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
 gi|311297763|gb|EFQ74886.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
          Length = 373

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 188/379 (49%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       + + +++   E++  +      +I +I+ GGG
Sbjct: 3   GIYLHIPFCKQACHYCDF--HFSTSLQYKGDMLKALANEIRLQKDYLANETIETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++   +  ++D I ++ TV+S+ EITIEANP  ++    +  R+  VNR S+G+QS
Sbjct: 61  TPSLLQGDEVNSLIDIITRHHTVASDAEITIEANPDDLDEQKVKALRQTPVNRFSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L ++ R H + EA +++   ++  F  ++ DLIY  P  T  +W+  L++     
Sbjct: 121 FFDEDLFWMNRAHRSREAESSVKRVQDAGFSNITADLIYGYPLLTDQKWKHNLEQIFKLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y +T+E  T      K       SE+ + D + +  +     G   YEISN   
Sbjct: 181 IPHISAYSMTVEPKTALASFIKKKLFAPMSESQSADQFLVLLNEMGQQGYEQYEISNFCL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN NYW+   Y+GIGP AHS           +  K    +++ +  N     E+
Sbjct: 241 PGHYSRHNSNYWKGVKYLGIGPSAHSFNGEARQWNIANNAK----YIQALSLNSIP-AER 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE---MLAGRNLDIECERNLQRQGFIERVQFSR 375
           E LS + + +E++M  LR   G+ ++  E     +G  L    E   ++ G+I R +   
Sbjct: 296 EELSEKDRLNEYIMTSLRTIWGLDIQKLESISKYSGEQLLKAAEEFFEK-GWINRKE-QI 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  +  G    D + + L 
Sbjct: 354 LTLSAEGKLYADHIASELF 372


>gi|269797939|ref|YP_003311839.1| oxygen-independent coproporphyrinogen III oxidase [Veillonella
           parvula DSM 2008]
 gi|294791820|ref|ZP_06756968.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 6_1_27]
 gi|269094568|gb|ACZ24559.1| oxygen-independent coproporphyrinogen III oxidase [Veillonella
           parvula DSM 2008]
 gi|294457050|gb|EFG25412.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 6_1_27]
          Length = 394

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 13/385 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGP--RSISS 73
             +G+YVH PFC +KC YCDF ++ +  +   E ++ + + E+  W+ +      ++I +
Sbjct: 14  RDMGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEIDLWVSEHPESTSKAIDT 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTP+ +  Q + +ILD I   +T++ +  +TIE+NP  V ++      K G NRI
Sbjct: 73  IYFGGGTPTELSIQQLQMILDKIKNTFTITDDCHMTIESNPGEVNLHYLTKLVKLGFNRI 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+ +++ L  L R+HN  +A  A++ A+   F  ++ DLIY LP+QT+   +  L 
Sbjct: 133 SFGVQTFDDKLLTMLHRSHNGEQAKQAVYDAKEAGFTDINIDLIYGLPRQTLEDIQYNLD 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                 ++H+S Y L +E GT  Y + +   + +PSE +   +Y++      A G   YE
Sbjct: 193 IVKDLPINHISTYGLQVEVGTYLYHLVQKNLISIPSETIDESMYDMMMDGLKALGFERYE 252

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +   + S HNL YW Y DY+G G GAHS        V  S  ++   +++ V +  
Sbjct: 253 ISNFAKTNSYSRHNLKYWHYVDYLGFGAGAHSFYDG----VRRSNNRNVMPYIQSVDRYI 308

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
              ++ E ++ E+  ++F  + LR + G+  + +E   G    NL      +L  +  +E
Sbjct: 309 MPTIDTETITLERAQEDFCFLALRTKWGLDERKFEDKFGVSVHNLFGTTLEDLVSKDLLE 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             Q      T  G    + V +   
Sbjct: 369 -YQSGSYHLTAEGAKHGNYVFSQFI 392


>gi|225011447|ref|ZP_03701885.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium MS024-2A]
 gi|225003950|gb|EEG41922.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacteria
           bacterium MS024-2A]
          Length = 374

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 113/378 (29%), Positives = 187/378 (49%), Gaps = 13/378 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H+PFC + C YC+F+    + +V Q    +  L E+           + SI+FGGG+
Sbjct: 4   LYFHYPFCKQACHYCNFHFSTNQKEVDQLE--EGMLKELDLRLTELKT-PLESIYFGGGS 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+    ++ ++      ++    +EIT+E NP  V  +  +  ++AGVNR+SLGVQS 
Sbjct: 61  PSLLSADKLSNLIHQSKAKFSFHDGIEITLEVNPDDVSKSYLKDVKEAGVNRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E+ L+ + R H+  +A+ ++    ++F   S DLIY +P  T+ +WE  L +AL +   
Sbjct: 121 YEKDLKLMNRAHSVDQALQSMEWVSSVFSNFSVDLIYGMPNSTLKEWETNLNQALKFNPP 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT+E+ T  Y   + G++ L  E      Y+       A     YE SN     
Sbjct: 181 HISTYALTVEEKTALYYQVEKGEVFLLIEEDVKAQYDFLVKRLEALNFINYEFSNFGKKD 240

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S++N NYW    Y+GIGP AHS               +   ++  ++K G    E E 
Sbjct: 241 FFSINNQNYWNGKPYLGIGPSAHSY---DGASTRTWNVSNNHKYVAALKK-GFLDNETER 296

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQRQGFIERVQFSRL 376
           LS + Q +E++M+GLR  EG+S +  E   G+     L+ +  R+L+ +          L
Sbjct: 297 LSKKDQYNEYVMIGLRKIEGLSKEHVEKTFGKTYAAYLESQVSRHLEERNL--FWDGDFL 354

Query: 377 RCTQRGMTMLDSVIANLA 394
           + T +   + D + A+L 
Sbjct: 355 KITPKAKFLSDGLAADLF 372


>gi|22298735|ref|NP_681982.1| coproporphyrinogen III oxidase [Thermosynechococcus elongatus BP-1]
 gi|22294916|dbj|BAC08744.1| oxygen independent coprophorphyrinogen III oxidase 2
           [Thermosynechococcus elongatus BP-1]
          Length = 399

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 196/384 (51%), Gaps = 14/384 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           ++  Y+H PFC ++C YCDF   V        +   + ++ +   E+      T  + + 
Sbjct: 2   TIAAYIHLPFCRRRCFYCDFPITVVGESPTLAQSLIQEYVAALCQEIAHTP--TEGQPLQ 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IFFGGGTPSL+ P  +  +L+ + +   ++   EI++E +P + ++   Q Y + GVNR
Sbjct: 60  TIFFGGGTPSLVPPPYLGQLLEALDRQLGIALEAEISMEMDPGTFDLEQLQDYLRLGVNR 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ+ +++ LR  GR+H+ ++   A+ + +       S DLI  LP+Q++  W+  L
Sbjct: 120 VSLGVQAFDDELLRLCGRSHDVADVERAVEIIQRAGVANWSMDLISGLPQQSLADWQCSL 179

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++A+++   HLS+Y L IE  T+F K ++     LPS+  A   Y+L   + +A G   Y
Sbjct: 180 EQAIAFKPTHLSIYDLIIEPKTVFSKRYQPEAAPLPSQEQAAAAYHLAHEMLTAAGYDHY 239

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G    HN  YWR   Y G G GA S ++        +  ++ + WL+ + ++
Sbjct: 240 EISNYAQGGFACRHNQVYWRNQSYYGFGMGATSYLQHRRLSRPRTRREYYQ-WLQALPES 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-QGFIER 370
            H   +    S   +  E LM+GLRLR+G+S+         +     +    +    +  
Sbjct: 299 LH---QGSPDSLWDRWLETLMLGLRLRDGLSLPALADEFPASWVEALQAAAAKISPALLS 355

Query: 371 VQFSRLRCT-QRGMTMLDSVIANL 393
           +   RL  T   G  + + VI +L
Sbjct: 356 LAGDRLHLTQPEGFLVANHVIVSL 379


>gi|224370374|ref|YP_002604538.1| HemN2 [Desulfobacterium autotrophicum HRM2]
 gi|223693091|gb|ACN16374.1| HemN2 [Desulfobacterium autotrophicum HRM2]
          Length = 382

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 193/382 (50%), Gaps = 18/382 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFCV+KC YCDF S        +  F+++ L+E+   +       + +I+FGGG
Sbjct: 6   AIYVHVPFCVRKCAYCDFYSI--DDLSLKRAFVKALLSEIAMCKD--RRAIVDTIYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P  I  IL  I +N+TVS   E T+E NP +V  + F   + +G+NR+++GVQS
Sbjct: 62  TPSLLLPGQIQEILTAIGENFTVSKGCETTLEVNPGTVNADYFGKIQDSGINRLNIGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L F+GR H+A+ A  A+  AR+  F  +  DLIY LP  T   W  +L  AL + 
Sbjct: 122 FDDERLDFMGRIHSAAVARQALQQARDTGFDNLGLDLIYGLPGDTEGAWVKDLDSALVFQ 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y LT E GT  +++ + G +    +     L+ LT +    HG   YEISN + 
Sbjct: 182 PEHLSCYMLTYEPGTPMHRLVEQGAITPLDDGSVAGLFKLTSTFLEGHGYLHYEISNFAA 241

Query: 259 -LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +  +S HN  YW +  Y+G GP AHS            + ++       +      V E
Sbjct: 242 GVSFQSRHNQKYWNHAPYLGFGPSAHSFENGTRFWNHADVCRYTSD----LGAGRLPVAE 297

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-----NLQRQGFIERVQ 372
            E L+++Q   E +M+GLR   G+ +  ++ ++ +      +        +  G   RV 
Sbjct: 298 TETLANDQILMEMIMLGLRTSMGVDLTKFDCISNQGFLKMFDAVVTDCEAKAWG---RVV 354

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R   T  G   LD++++   
Sbjct: 355 NQRFFLTLDGRLFLDTIVSAFV 376


>gi|227824433|ref|ZP_03989265.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904932|gb|EEH90850.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 379

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 118/372 (31%), Positives = 187/372 (50%), Gaps = 15/372 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF S+  +    +  ++++ + E++           ++++ GGG
Sbjct: 9   GIYLHIPFCQHKCSYCDFISYQGQDGAARARYVKALIREIRSYDAPLPVSRGATVYVGGG 68

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + +A I   + +   + S  E+T EANP +V+    +G R  GV+R+SLG+QS
Sbjct: 69  TPSLLSLEELAAIFHALKEKGYLHSPREVTFEANPGTVDEAYLRGLRALGVDRLSLGIQS 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           LE+  LR +GR H A EA   I L++   F R+S DLIY  P QT    E  L   ++  
Sbjct: 129 LEDSELRLMGRTHTADEARHIILLSKKVGFTRLSCDLIYGYPTQTAASVEASLTELMALG 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L++E GT+     + G  +LP+++   ++Y+L        G   YEISN + 
Sbjct: 189 PSHISIYGLSVEPGTVLSHNLRQGRWILPTDDETGNMYDLIMDRLVKGGYERYEISNFAK 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +S HNL YW Y  Y+  G GA         R      ++  ++L    +      E 
Sbjct: 249 AGDKSRHNLVYWHYNPYLAFGAGAT--------RFDGRTRENNPAYLAAYERGEAP--EI 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E LS   Q +E + M LR   G+S+ D+E   GR+   +      NL  +G+  + +   
Sbjct: 299 ECLSPAVQREEMIFMNLRTVRGLSLLDYEARFGRSFAFDYGPQIENLIHKGW-AKWEDGH 357

Query: 376 LRCTQRGMTMLD 387
              T  GM   +
Sbjct: 358 FCLTPLGMQYGN 369


>gi|319950004|ref|ZP_08023986.1| oxygen-independent coproporphyrinogen-III oxidase HemN [Dietzia
           cinnamea P4]
 gi|319436332|gb|EFV91470.1| oxygen-independent coproporphyrinogen-III oxidase HemN [Dietzia
           cinnamea P4]
          Length = 363

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 152/346 (43%), Gaps = 13/346 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-------QWMRQ 64
                   G+Y+H PFC  +C YCDFN++         + +              Q +  
Sbjct: 17  ARDPEAPFGIYLHVPFCSTRCGYCDFNTYTAGELGSATSPVDWERAAAIEIERAAQALSS 76

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  + ++F GGGTPSL+    +  +L  I   ++++   E+T E+NP S     F  
Sbjct: 77  AGAPPEVDTVFIGGGTPSLVGADVLVGLLARIDAAFSLAPGAEVTTESNPESTSPEFFAR 136

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQT 183
            R+ G  RISLG+QS     LR L R H       A+  A R  F  ++ D+IY  P +T
Sbjct: 137 LREGGFTRISLGMQSTAAHVLRVLDRAHTPGRPQEAVAEALRAGFEHVNLDVIYGTPGET 196

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L   +   VDH+S Y L +E GT   +  + G++    ++V  D Y       
Sbjct: 197 DDDLARTLDAVVGAGVDHVSAYSLIVEDGTALARRIRRGEMPGTVDDVLADRYEQVADRL 256

Query: 244 SAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +  G H YE+SN +    A   HN+ YWR GD+ G+GPGAHS V            +HP 
Sbjct: 257 ARAGFHWYEVSNFATDSSAYCRHNMGYWRGGDWWGVGPGAHSHVAGAR----WWNVRHPA 312

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            +          V   E L    +  E +M GLRL EG+  + +  
Sbjct: 313 RYAAECDAGRLPVDGGEMLDDSDRHIERIMTGLRLAEGLGDEAFTA 358


>gi|313893429|ref|ZP_07827001.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442070|gb|EFR60490.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 399

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 112/383 (29%), Positives = 196/383 (51%), Gaps = 13/383 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW---MRQLTGPRSISSIF 75
           +G+YVH PFC +KC YCDF ++ +  +   E ++ + + EM         +  + I +I+
Sbjct: 21  MGLYVHIPFCKQKCMYCDFPAY-QNLQDYYETYVYALVQEMDLWVSEHPESKSKPIDTIY 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+ +  Q + +I+D I   +T++ +  +TIE+NP  +++       K G NRIS 
Sbjct: 80  FGGGTPTELSIQQLQMIVDKIKSTFTITDDCHMTIESNPGEIDLQYLTQLVKLGFNRISF 139

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+QT+   +  L   
Sbjct: 140 GVQTFDDKALTMLHRSHNGEKAKQAVYEAKEAGFTDINIDLIYGLPRQTLEDIQHNLHIL 199

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               ++H+S Y L +E GT  Y + +   + +PSE++   +Y+         G   YEIS
Sbjct: 200 KDLPINHISTYGLQVEVGTYLYHLVQKNLISIPSESIDEAMYDTMMEGLKNQGFERYEIS 259

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +   + S HNL YW Y DY+G G GAHS        +  S  ++   +++ V +    
Sbjct: 260 NFAKDSSYSRHNLKYWHYVDYLGFGAGAHSFYDG----IRRSNNRNVMPYIQAVDRYTMP 315

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERV 371
            ++ E ++ E+  ++F  + LR + G+  + +E   G    NL      +L  +G +E  
Sbjct: 316 TIDTETITVERAQEDFCFLALRTKWGLDEQKFEDRFGVSVHNLFGNILEDLVTKGLLE-Y 374

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           Q      +  G    + V +   
Sbjct: 375 QNGSYHLSFEGAKHGNYVFSQFI 397


>gi|291514372|emb|CBK63582.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alistipes shahii WAL 8301]
          Length = 377

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 180/380 (47%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC + C YCDF   V       +  ++S   E+   R+  G   + + +FGGG
Sbjct: 3   GLYFHIPFCKRVCAYCDFYKSV--DLRRMDPLLESMHRELDARREYLGSEPVRTRYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P+ +  +LD  A  +  ++  E T+EANP  +        R+AGVNR+S+G+QS
Sbjct: 61  TPSLCAPEAVTGLLDHAATLFDCTAAEETTLEANPDDLTPAYLAALRRAGVNRLSVGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ + R HNA++A+ A+  A+   +  ++ DLI+ +P          L  AL+  
Sbjct: 121 FDDACLKLMNRRHNAAQAVEAVRSAQREGYENITVDLIFGVPGFGDDTLRRSLDSALALG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+E GT F +    G      E  +   Y L     +  G   YE+SN + 
Sbjct: 181 VQHISAYHLTVEPGTAFGRRAARGQFAPVDEATSETEYALVHETLTGAGFEHYEVSNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HN  YW    Y+GIGP AHS      H    S+ ++           G    E 
Sbjct: 241 PGFRARHNAAYWHGVKYLGIGPAAHSFDGRERHWNVASVTEYI----------GGTPAEA 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE----RVQFS 374
           E L+   + +E++M  LR  EGI +++ E L G+       R+   + +++     +   
Sbjct: 291 ETLTDRDRFNEYVMTRLRTAEGIDLREAERLFGKERAARVLRD--AEPWLKSRTLVLAAG 348

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+      M + D+VI    
Sbjct: 349 RMAVPPARMLVSDAVIETFF 368


>gi|269218590|ref|ZP_06162444.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211701|gb|EEZ78041.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 403

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 123/387 (31%), Positives = 179/387 (46%), Gaps = 20/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR---RYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           S  L  YVH PFC  +C YCDFN++            +F +S   E+   R +       
Sbjct: 22  SGGLSAYVHVPFCAVRCGYCDFNTYTNLDFGPGASTSDFPESLAREIALSRGVLRGGEAG 81

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             I ++FFGGGTP++++P  +  +L  +   + +    E T EANP SV+  +      A
Sbjct: 82  PLIDTVFFGGGTPTMLDPGQLGSVLAALDAAFGLREVAEATTEANPESVDRESLFQLADA 141

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G  R+S G+QS  E  L  L R H   +   A+  AR     +S DLIY  P +TM QW 
Sbjct: 142 GFTRVSFGMQSAVESVLATLDRRHTPGQVGRAVGWAREAGLDVSVDLIYGAPGETMGQWR 201

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++ A++   DHLS Y LT+E GT        G + LP  +   D Y        A G 
Sbjct: 202 RSVEAAIALEPDHLSAYALTVEPGTKMGAQASRGAIRLPDPDELADKYEAADEAFEAAGY 261

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN +  G E  HN  YW  G++ G GPGAHS +            KHP ++ + V
Sbjct: 262 RWYEISNWARAGRECRHNRVYWGGGNWWGYGPGAHSHINGTR----FWNVKHPLAYARRV 317

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
                    +E L+  + ADE +M+G+R+REGI +  +       +  +    L   G +
Sbjct: 318 AAGESPAAAREVLTVSESADEAVMLGIRMREGIEIPRF-------ISAQTTAGLVADGLL 370

Query: 369 E--RVQFSRLRCTQRGMTMLDSVIANL 393
           +       R+  T RG  + D+V   L
Sbjct: 371 DGRAAVAGRIVLTLRGRLLADAVTRRL 397


>gi|255039505|ref|YP_003090126.1| oxygen-independent coproporphyrinogen III oxidase [Dyadobacter
           fermentans DSM 18053]
 gi|254952261|gb|ACT96961.1| oxygen-independent coproporphyrinogen III oxidase [Dyadobacter
           fermentans DSM 18053]
          Length = 374

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 184/381 (48%), Gaps = 12/381 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC + C YCDF  H       +    ++   E+   +       + +I+FGG
Sbjct: 1   MHLYIHIPFCKQACHYCDF--HFSTNTTQKRAMAEAIAREIVLRKSYLPDGDMETIYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++   + L+LD + +++ V+   EIT+EANP  +   +   + +AG+NR+S+G+Q
Sbjct: 59  GTPSMLDEAELHLLLDTVHRHFRVAPGAEITLEANPDDLNAASLSMFARAGINRLSIGIQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  LRF+ R H A EA   + +A+N     +S DLIYA+P +       +L +A + 
Sbjct: 119 SFHEPHLRFMNRAHTALEAKQCVKIAQNAGIDNISIDLIYAIPSENHDILHADLAQAFAL 178

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LTIE  T F    K   +    E  A   + +        G   YEISN +
Sbjct: 179 NVPHISAYCLTIEPQTAFGSWLKKKKIKPIEEEYAAQQFEMLVGSLCGEGYEQYEISNFA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN +YW+   Y+G+GP AHS               H   +L  ++K       
Sbjct: 239 RNGRYSRHNSSYWKQHPYLGVGPSAHSYNGTTREFNVS----HNAKYLDALQKGIIP-AT 293

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFS 374
            E L+     +E+L+ GLR   G+ ++    L+      +  R L    R+G++ R    
Sbjct: 294 VETLTGADNTNEYLLTGLRTIWGVDLQKLHELSNGAFAAQHRRQLDGMIRKGWV-REDSG 352

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            LR T+ G    D + ++L +
Sbjct: 353 TLRLTEAGKLFADRISSDLFI 373


>gi|148244382|ref|YP_001219076.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326209|dbj|BAF61352.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 372

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 207/381 (54%), Gaps = 21/381 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H+P+CVKKCPYCDFNSH    + G   +I+S L ++         R+I SIF G
Sbjct: 9   PLSLYIHYPWCVKKCPYCDFNSHDCNQRSG---YIESLLEDLNEDLDYIQGRAIQSIFLG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  Q +  +  G+ K     +++EIT+E NP   E+  F+ ++  G+NR+S+GV
Sbjct: 66  GGTPSLMSEQELFKLFTGLKKRLKFVNDIEITLETNPGIFEIEKFKLFKHIGINRLSIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L+ LGR HNA EAI A   A    F   + D++Y L +QT+ +   ++++A++
Sbjct: 126 QSFNDRHLQSLGRIHNADEAIYACKQANQVGFKYFNIDIMYGLERQTLDECLSDVRQAMN 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+S YQLTIE  T F K       +LPS+ V   + +   S+   +G   YE+S  
Sbjct: 186 LKPDHISFYQLTIEPNTYFAK----YTPILPSDEVVWQMGDAGVSLLERNGYTRYEVSAF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHA 314
                 S HNLNYW++GDY+GIG GAH ++ +          K   P+ +LK  +K  + 
Sbjct: 242 GKT--PSKHNLNYWQFGDYVGIGAGAHGKITLLKESFPFRTIKARLPKDYLKNRQKQVNQ 299

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQF 373
           +        +    +F++  LRL+ G +++ +E+   + +  IEC+ N  +   +  +  
Sbjct: 300 I--------KNLNFDFMLNALRLKHGFNLRLFELRTRQPIQVIECQLNKAKALGLFELDG 351

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
              + +++G   L+ + A   
Sbjct: 352 KLAKPSKKGFDFLNDLQAIFL 372


>gi|77917728|ref|YP_355543.1| oxygen-independent coproporphyrinogen III oxidase [Pelobacter
           carbinolicus DSM 2380]
 gi|77543811|gb|ABA87373.1| coproporphyrinogen III oxidase, anaerobic [Pelobacter carbinolicus
           DSM 2380]
          Length = 393

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 123/377 (32%), Positives = 191/377 (50%), Gaps = 4/377 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFGG 78
           G+Y+H PFC++KCPYCDF S           +    + +++  ++       +S++FFGG
Sbjct: 19  GLYLHIPFCLRKCPYCDFFSLPA-EPGLLTAYPDLLIAQLEIEKRSHRWQGRLSTVFFGG 77

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  I  IL+   + + +S+  EI++EANP +V +++  GYR AG+NR+S GVQ
Sbjct: 78  GTPSLLSPDAIGRILNEADRLFGLSAEAEISLEANPGTVTLDSLSGYRAAGINRLSFGVQ 137

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++  L+ LGR H A++A +A+H AR   F  +S DLI+ALP Q+      +L+  L  
Sbjct: 138 SLDDAYLQRLGRIHTAADAHSAVHWARKAGFDNLSCDLIFALPDQSSQAALEDLENMLRL 197

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y L IE GT   +  +DG L   +E    D +    +  +  G   YEISN++
Sbjct: 198 EPQHLSCYGLGIEPGTPLAQALEDGRLRPATEQAYADTFLRLHARLAEAGYEHYEISNYA 257

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNLN WR   Y+G+GPGAHS     +     ++    + +++ V         
Sbjct: 258 RPGRHCRHNLNTWRRQPYLGVGPGAHSFC-ARNWGERRAVPADFDRFVETVSAGLDPSTV 316

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E    E+   E   +GLR  EG++   +    G       E+ ++R G    +Q     
Sbjct: 317 LETFQREEAMAETAYLGLRCAEGVNDAAFSHRFGTTFAEVFEQAIKRCGKHLSLQDGHWC 376

Query: 378 CTQRGMTMLDSVIANLA 394
               G  + D  I +  
Sbjct: 377 LDLEGWLLFDHFITDFL 393


>gi|257066667|ref|YP_003152923.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
 gi|256798547|gb|ACV29202.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
          Length = 372

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 117/374 (31%), Positives = 203/374 (54%), Gaps = 11/374 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G Y+H PFC KKC YCDF +     +   + +I + + E++  ++     +I +I+ 
Sbjct: 2   KKVGCYIHIPFCEKKCYYCDFAAF-EGLEAWIDPYIDNLIKEIRLYKENM-DLAIDTIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS I+P  I  IL  +       +++ E ++E NP+S++ +  Q Y+  GV RISL
Sbjct: 60  GGGTPSYIDPLYIEKILREVR---GFDTDIKEFSLECNPNSIDSDKLQAYKDLGVTRISL 116

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ LR +GRNHN   AI  I L ++    +SFDL+  LP Q +   + +L+   
Sbjct: 117 GVQSFDDKVLRNIGRNHNKEIAIRDIKLIKSFGFDLSFDLMLNLPGQDLASVKKDLEMVK 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             + DH+S Y L ++KG+ FY + K G L L  +++ VD+++         GL  YEISN
Sbjct: 177 RLSPDHVSRYSLILDKGSRFYALDKKGKLDLMEDDLEVDIFSYLVDELDKLGLKRYEISN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES+HN  YW   DYI  G GA   +    +    +  K    + K +R+    +
Sbjct: 237 FARKGKESIHNKKYWNIDDYIAFGLGASGFLSNKRYNNTRNFVK----YDKALRQGKFPL 292

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-QGFIERVQFS 374
           V +EF+  +++  E+++  LR REGI++++++     +  ++ +  L++ +G        
Sbjct: 293 VFEEFIDKDEREKEYIIFKLREREGINLREFKEKFTCDFLVKYQDVLEKFEGQDFYKIDD 352

Query: 375 RLRCTQRGMTMLDS 388
               T++GM++ + 
Sbjct: 353 NFYFTKKGMSLSNE 366


>gi|228472779|ref|ZP_04057537.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga gingivalis ATCC 33624]
 gi|228275830|gb|EEK14596.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga gingivalis ATCC 33624]
          Length = 377

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 112/383 (29%), Positives = 187/383 (48%), Gaps = 16/383 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             +Y+H PFC + C YCDF+      +  Q   +++   E++  R++     + +I+FGG
Sbjct: 2   YSLYIHIPFCRQACHYCDFHFSTTLKRKPQ--MVKALCKELEL-RRVEASTPLQTIYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNRIS 134
           GTPS++    +  I   I K++ ++S  EIT+E NP        +   +     G+NR+S
Sbjct: 59  GTPSVLTSVELQEIFSTIHKHYRIASGAEITMEVNPDDFSTPKSELSLELLKELGINRLS 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQS  E+ L  + R H A +A   I  A   F  ++ DLIY +P  T+ +W+  + +A
Sbjct: 119 IGVQSFFEEDLLLMNRAHTAEQAKDFIAQAIQYFDNITLDLIYGIPGMTLARWKENILQA 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS+ + HLS Y LT+E  T  Y+  K G +   ++  A + + L + +  A G   YE+S
Sbjct: 179 LSFGIPHLSAYALTVEPRTALYQFIKKGKIPPTNDGQAKEHFYLLKDLLEAKGFIHYELS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N    G  S +N  YW    YIGIGP AHS              K+ E         G  
Sbjct: 239 NFGKEGYFSRNNTAYWEQKPYIGIGPSAHSYTGEERMWNISHNIKYIEQI-----SQGIL 293

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERV 371
             E+E LS + + +E +M GLR+++GIS +  E   G       ++       +G +   
Sbjct: 294 PQERETLSLKDRYNERIMTGLRIQKGISTEAIERDFGEFFLNYLKKEALPYIEKGLLV-Y 352

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               +  +++G+ + D + ++L 
Sbjct: 353 HNGHIITSEKGLFLSDGIASDLF 375


>gi|126657581|ref|ZP_01728736.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
 gi|126621037|gb|EAZ91751.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
          Length = 408

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 117/404 (28%), Positives = 193/404 (47%), Gaps = 31/404 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV------RRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
            +  Y+H PFC ++C YCDF   V               + Q    E++     T    +
Sbjct: 2   PISAYLHIPFCRRRCYYCDFPISVLGDKTNTNQSGSIVEYAQFLCEEIKITP--TCHLPL 59

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P+ +  IL  + +++ + +N EI+IE +P +  +     Y+K GVN
Sbjct: 60  ETVFFGGGTPSLLPPRYLEKILLTLDEHFGIDANAEISIEMDPGTFTLEQLHDYKKLGVN 119

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R S+GVQS  ++ L   GR H   +    I+          S DLI  LP QT+  WE+ 
Sbjct: 120 RFSVGVQSFNDKLLEKCGRFHRLKDIEQTINFIYQTNIKNFSLDLISGLPYQTLETWELS 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A++    H+S Y L +E  T F K +K G+  LP +     +Y +TQ   +  G   
Sbjct: 180 LEQAITINPSHISCYDLVLEPVTAFGKQYKPGNFPLPDDEDTSKMYKITQQKLTKAGYEH 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++ LG +  HNL YW    Y G G GA S           + + + E W+K ++ 
Sbjct: 240 YEISNYAKLGYQCRHNLFYWENKPYYGFGMGAASYTNNQRFTRPKTRKTYYE-WVKQLKL 298

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL-------- 362
           +G+ V+    LS      E LM+GLRL++GI++ +      +++  +  + L        
Sbjct: 299 SGY-VISASNLSRVDILLETLMLGLRLKKGINLSEISNRFEKDIIEKIYQTLIPYHQAEL 357

Query: 363 -----QRQGFIERVQFS------RLRCT-QRGMTMLDSVIANLA 394
                    FI  +  +      R+  +   G  + ++++A+L 
Sbjct: 358 VYFKNINDNFITEINNNSWQSIHRIMLSDPDGFLLSNTILASLF 401


>gi|282878929|ref|ZP_06287693.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccalis ATCC 35310]
 gi|281298928|gb|EFA91333.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccalis ATCC 35310]
          Length = 386

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/391 (26%), Positives = 192/391 (49%), Gaps = 25/391 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--------- 70
           G+Y+H PFC  +C YC F S    +   ++ ++ +   EMQ  R                
Sbjct: 3   GLYIHIPFCASRCIYCGFYS--TTHLDVRQQYVDALCREMQLRRHYLPTTDDTSAVAQPL 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN------VEITIEANPSSVEVNNFQG 124
           IS+I+ GGGTPS + P  +  I   I   +    +       E+T+E NP  +  +  Q 
Sbjct: 61  ISTIYLGGGTPSQLTPAQLQQIFCTIVTVFFHGDDTLMRTHCEVTMECNPDDITPSFVQF 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
            + + VNR+S+GVQS   + L+FL R H+A +    +   R+I    +S DL++  P QT
Sbjct: 121 LQHSPVNRVSMGVQSFSNERLKFLHRRHHAQDISPVVQQLRSIGIDNISVDLMFGFPNQT 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +W++++Q+AL+  V+H+S Y L  E+GT  Y++ ++  +    + +++ +Y       
Sbjct: 181 LDEWKLDIQKALALRVEHISAYSLMYEEGTPLYQLLRNNKVKEIDDELSLTMYQTLVDEL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A G   YEISN +  G  S HN +YW    Y+GIG  AHS       +       + + 
Sbjct: 241 KASGYEHYEISNFAKPGKRSQHNSSYWHAIPYLGIGASAHSY----DIQSRQWNVSNIKE 296

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           ++  + +      E+E+L  + + ++ +   LR  EGI++          L  + E+ + 
Sbjct: 297 YISSIEQGEIP-FEREWLDDDTRYNDLITTALRTSEGINLSMLSPKHKTYLLQQAEKQIA 355

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +   +  ++   +R T +G+ + D+++A+L 
Sbjct: 356 QN--LLEIRGDSIRLTAQGLYVSDAIMADLI 384


>gi|225378445|ref|ZP_03755666.1| hypothetical protein ROSEINA2194_04113 [Roseburia inulinivorans DSM
           16841]
 gi|225209668|gb|EEG92022.1| hypothetical protein ROSEINA2194_04113 [Roseburia inulinivorans DSM
           16841]
          Length = 404

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 109/405 (26%), Positives = 198/405 (48%), Gaps = 41/405 (10%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           KKC YCDF S     +  Q++++ +   E+ +       R I++IF GGGTPS ++   +
Sbjct: 2   KKCDYCDFLSFAADEQT-QKSYVAALQKELAFYGAKYKDRRITTIFIGGGTPSWLKEDYM 60

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             I++ +   ++V  + EITIE NP ++  + F+ YR+ G+NR+S+G+QS+  + L+ LG
Sbjct: 61  QAIMETVYHYFSVEQDAEITIECNPGTITEHKFEVYRRIGINRLSIGLQSVHNEELKILG 120

Query: 150 RNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H   + +    +AR + F  ++ DL+ +LP QT   +   L + L    +H+S Y L 
Sbjct: 121 RIHTFEQFLKTYDMARKHGFSNINIDLMSSLPGQTPEIFCDSLYQVLKLKPEHISAYSLI 180

Query: 209 IEKGTLFYKMHK---------DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           IEKGT FY++++              LP+E        + Q I    G H YE+SN +  
Sbjct: 181 IEKGTPFYELYRFDAVRQEAGMQTESLPTEEEEYQTTKMIQHILKEAGYHWYEVSNFAKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES-------WLKMVRKNG 312
           G E  HN+ YW+  DY+G+G GA S +    +     +  +          +++     G
Sbjct: 241 GYECRHNIGYWKRVDYLGVGLGASSLIDNVRYSNTRDLYTYLSECENIHDCYMQYPLTEG 300

Query: 313 ------HAVVEKEFL-------------SSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                 ++      L             +  +Q +EF+ +GLR+R+G   +++    G  
Sbjct: 301 VTGSAVYSADGTHILVPAVNLHAAAEQTTRNEQMEEFMFLGLRMRDGFYREEFTQAFGIP 360

Query: 354 LDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++    +   +LQ++  + + +  R+  T +GM + + V+A   +
Sbjct: 361 IEAVYGDALNHLQQEELLLKRE-GRIYLTDKGMDLNNYVVAQFML 404


>gi|256818925|ref|YP_003140204.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea DSM 7271]
 gi|256580508|gb|ACU91643.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea DSM 7271]
          Length = 383

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 16/384 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             +Y+H PFC + C YCDF  H       +   + +   E+ + +       + +I+ GG
Sbjct: 2   YSLYIHIPFCRRACYYCDF--HFSTTLKRKGEMVDALCEELIFRKGEAVGSELQTIYLGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-----EVNNFQGYRKAGVNRI 133
           GTPS++  + +  +   I  ++ V++  EIT+EANP             +  R  G+NR+
Sbjct: 60  GTPSILSYEELQQLFRTIFTHYKVNTTAEITLEANPDDFFRATSPEQFLEQLRSLGINRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS  E+ LR + R H  S+    + +A   F  ++ DLIY +P+ +  +W+  + +
Sbjct: 120 SLGVQSFFEEDLRLMNRVHTVSQVETLLQIAPQYFNNITIDLIYGIPRMSEERWQENINK 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+ + H+S Y LT+E+ T  YK    G +   S+  A   + +      A G   YE 
Sbjct: 180 ALSFDIPHISAYALTVEEKTALYKFIATGKIAPISDEQAYTHFQMLIDTLEAEGFIQYEF 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G  S +N  YW    Y+GIGP AHS              K    +++ +++   
Sbjct: 240 SNFGKEGYFSRNNTAYWFGKLYMGIGPSAHSFNGKERSWNIAHNIK----YIQQIQQGIL 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
              EKE L+   + +E ++  +R   GI +++   + G        +  Q+      +  
Sbjct: 296 P-QEKEELTLNNRYNELIITRIRTMVGIDLEEVRTVFGEGYRQYLLQQAQKYLADELLV- 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           ++ + L+ T++G  + D + ++L 
Sbjct: 354 IEENHLKVTRKGRFLSDGIASDLF 377


>gi|170289429|ref|YP_001739667.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga sp.
           RQ2]
 gi|170176932|gb|ACB09984.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga sp.
           RQ2]
          Length = 374

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/377 (31%), Positives = 182/377 (48%), Gaps = 14/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH PFC KKC YCDF S         E ++     E++  R +     I +++FGG
Sbjct: 3   LAVYVHIPFCKKKCVYCDFYSVAS---EDFEEYLSLVFEEIELYRDVLKESEIETVYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  IL+ + +     S +E TIE NP SV+    + YRK G+NRISLGVQ
Sbjct: 60  GTPSLVPPSFLEKILEKLKEVSKKFSPLETTIEVNPESVDREKLRSYRKMGINRISLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+  GR ++         L    F  ++FD I  LP +T    E  L     + 
Sbjct: 120 SCDDGVLKKCGRLYDEKMLKEKAELVLAEFDNVNFDFILGLPGETDETLEKNLHFLEEFT 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLY L +++ T  Y + K   L LP  +     +++      + G   YEISN + 
Sbjct: 180 PQHVSLYFLEVDENTPLYSLLKKNLLTLPDSDEVERRHDVFVEFLKSRGFERYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HNL YWR  DY+G GP A   +     R   +       + KMV++       +
Sbjct: 240 PERESRHNLFYWRNHDYLGFGPSAGGHLG----RFRYTNVSDLSMYAKMVKEKTFPYDYR 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-ERVQFSRLR 377
              S +++A E L MGLR +EG+ +K  E L      +     LQ++     +V+  ++ 
Sbjct: 296 HENSEDEEALETLFMGLRTKEGVELKRVERL------MFLVEKLQKEYACYVKVKDGKIF 349

Query: 378 CTQRGMTMLDSVIANLA 394
            ++ GM +   +  +L 
Sbjct: 350 LSEEGMDLSKKIFEDLI 366


>gi|194335488|ref|YP_002017282.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194307965|gb|ACF42665.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 374

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H PFC  +C YCDF     R  +   +F ++   E           ++ +I FGG
Sbjct: 2   LTLYLHIPFCKARCSYCDFYLVTGRGHI--SDFFRALSLETASRLTDLKGETVGAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    +A  L+ +A   + S  +EIT+EANP  ++    +  R AG+ R+S+GVQ
Sbjct: 60  GTPSMVPVSYLAAWLEEVAALCSFSPEIEITLEANPEDLDKKKMEELRAAGITRLSIGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L+ LGR H A ++      A  +F  +S DLI  +P +    W+ +L  AL+  
Sbjct: 120 SFTAEKLQALGRAHTALQSRQVTAAALRLFESVSVDLICGVPGENTVMWKSDLHEALALR 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L++E  T+ +     G + +P + V    Y   QS     G   YE+SN   
Sbjct: 180 PHHVSVYMLSVEPKTILHHRVAKGSVTVPDDAVQAACYEHAQSELQLQGYSHYEVSNFCL 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +NL  W+   Y+G GP AHS        +  +       +L        AVV +
Sbjct: 240 PGHHSRYNLASWKREPYLGFGPSAHSFSVSQEREIRTANVSSLTRYLAAPAD---AVVFR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSR 375
           E LS+E++  E + + LR+  G+ V       G  L+    +       +G+IE+ + S 
Sbjct: 297 EELSAEERFTEQVFLSLRINSGLDVDFLRK--GNKLEHTLSQTIARFSEKGWIEQQEGS- 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  TQ+G   +D +     
Sbjct: 354 LYLTQKGFLFVDLIAGEFL 372


>gi|294793681|ref|ZP_06758818.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 3_1_44]
 gi|294455251|gb|EFG23623.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella sp. 3_1_44]
          Length = 394

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 115/385 (29%), Positives = 201/385 (52%), Gaps = 13/385 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGP--RSISS 73
             +G+YVH PFC +KC YCDF ++ +  K   E ++ + + E+  W+ +      ++I +
Sbjct: 14  RDMGLYVHIPFCKQKCMYCDFPAY-QNLKDYYETYVYALVQEIDLWVSEHPESTSKAIDT 72

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+FGGGTP+ +  Q++ +ILD I   +T++ +  +TIE+NP  V ++      K G NRI
Sbjct: 73  IYFGGGTPTELSIQHLQMILDKIKNTFTITDDCHMTIESNPGEVNLHYLTKLVKFGFNRI 132

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ+ ++++L  L R+HN  +A  A++ A+   F  ++ DLIY LP+Q++   +  L 
Sbjct: 133 SFGVQTFDDKALTMLHRSHNGEQAKQAVYDAKEAGFADINIDLIYGLPRQSLDDIKRNLA 192

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                 ++H+S Y L +E GT  Y + +   + +PSE++   +Y+   +     G   YE
Sbjct: 193 VVEELPINHISTYGLQVEVGTYLYHLVQKNLIFIPSESIDESMYDTMMAGLKELGFERYE 252

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +   + S HNL YW Y DY+G G GAHS        V  S  ++   +++ V +  
Sbjct: 253 ISNFAKANSYSRHNLKYWHYIDYLGFGAGAHSFYDG----VRRSNNRNVMPYIQSVDRYI 308

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
              ++ E ++ E+  ++F  + LR + G+  + +E   G    +L      +L  +G +E
Sbjct: 309 MPTIDTETITLERAQEDFSFLALRTKWGLDEQKFEDKFGVSVHDLFGTALDDLVSKGLLE 368

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
             Q      T  G    + V +   
Sbjct: 369 -YQNGSYHLTAEGAKHGNYVFSQFI 392


>gi|32476125|ref|NP_869119.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
 gi|32446669|emb|CAD76505.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
          Length = 389

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 116/377 (30%), Positives = 185/377 (49%), Gaps = 7/377 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C YC+F+    R ++ Q+ ++ +   E++ +   +    + +IF GGG
Sbjct: 14  SLYVHVPFCRHRCGYCNFSVIAGRDEL-QDQYLDAVERELKGIDNSSHELPLRTIFLGGG 72

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +   I+  + ++ + EIT EANP  +        +  GVNRISLGVQS
Sbjct: 73  TPTRLSATRLQRLHRAISNAFPIADDAEITAEANPEDISPECLDALQAIGVNRISLGVQS 132

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + + LR L R H+ S A++AI  A      +S DLI+  P +++  W+ +L  A + ++
Sbjct: 133 FDAEKLRCLERGHDESIALSAIESAHRRVGNVSIDLIFGAPNESLATWQNDLSIAAASSI 192

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT EKGT F+     GDL    E + + +Y   Q   S  G   YEIS+ +  
Sbjct: 193 SHVSTYALTFEKGTSFWSRRSRGDLSETDETLELQMYEAAQQQFSIDGWQQYEISSFARG 252

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
                HNL YW    +  +GPGA   V         S      ++LK +   G+A  E E
Sbjct: 253 ATRCQHNLAYWAGRGWHAVGPGAARFVDGRREVNHRSTT----TYLKRMLAGGNATDETE 308

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV--QFSRLR 377
            ++ EQ A E    G+R  +GI +   +     +L+    + L +   +E V  +   LR
Sbjct: 309 AITLEQYARELAAFGVRQLDGIDLSTIDNRTSIDLETLLAKTLTKLQSMELVTHENHHLR 368

Query: 378 CTQRGMTMLDSVIANLA 394
            T RG+   D+V   L 
Sbjct: 369 LTCRGILFADTVATALL 385


>gi|94676535|ref|YP_588917.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219685|gb|ABF13844.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 385

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 117/372 (31%), Positives = 198/372 (53%), Gaps = 19/372 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y+H P+C+KKC YCDF +     KV  + +I   L +++    L    S+ +IF GG
Sbjct: 14  LSLYIHIPWCMKKCCYCDFPTTTLHNKVPNKEYISHLLIDLKQSLLLIDGYSLKTIFIGG 73

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + +  ++D I K   +++N+E+TIE NP ++  N+   Y+  G+NRIS+GVQ
Sbjct: 74  GTPSLLTIEMLEKLIDSIYKMVPLATNLELTIEVNPGTINENHLISYQTIGINRISIGVQ 133

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +     L  LGR H   +A   +  A  I F  ++ D++Y LP QT+ Q   +L++A++ 
Sbjct: 134 TFNRNHLIHLGRLHRPEDATNIVSFASAIKFNSINLDIMYGLPNQTVNQALDDLRQAIAL 193

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A  H+S YQLTIE  T+F+         LP +++  D+Y     +  + G   YEIS ++
Sbjct: 194 APQHISWYQLTIEPNTIFWN----TKPKLPKDDIIWDIYQQGNELLMSSGYQPYEISAYA 249

Query: 258 FLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAV 315
                + LHN+NYWR+GDY+GIG  AHS++ +    +   ++ ++P  ++K     G  +
Sbjct: 250 HNKSYQCLHNMNYWRFGDYLGIGCSAHSKLTLPDGTIIRMVKVRNPFLYMK-----GKYL 304

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ----GFIERV 371
            +   ++      E+ M   RL E +   ++  L   +L     R++  Q    G+I   
Sbjct: 305 DKSYQVALSDLPFEYFMNRFRLFEIVPRNEFTQLT--SLAENDIRSMLDQSINLGYISEY 362

Query: 372 QFSRLRCTQRGM 383
                + T++G 
Sbjct: 363 -NKYWQITEKGK 373


>gi|69954026|gb|AAZ04347.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga sp. RQ2]
          Length = 374

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 120/377 (31%), Positives = 182/377 (48%), Gaps = 14/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH PFC KKC YCDF S         E ++     E++  R +     I +++FGG
Sbjct: 3   LAVYVHIPFCKKKCXYCDFYSVAS---EDFEEYLSLVFEEIELYRDVLKESEIETVYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  IL+ + +     S +E TIE NP SV+    + YRK G+NRISLGVQ
Sbjct: 60  GTPSLVPPSFLEKILEKLKEVSKKFSPLETTIEVNPESVDREKLRSYRKMGINRISLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+  GR ++         L    F  ++FD I  LP +T    E  L     + 
Sbjct: 120 SCDDGVLKKCGRLYDEKMLKEKAELVLAEFDNVNFDFILGLPGETDETLEKNLHFLEEFT 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLY L +++ T  Y + K   L LP  +     +++      + G   YEISN + 
Sbjct: 180 PQHVSLYFLEVDENTPLYSLLKKNLLTLPDSDEVERRHDVFVEFLKSRGFERYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HNL YWR  DY+G GP A   +     R   +       + KMV++       +
Sbjct: 240 PERESRHNLFYWRNHDYLGFGPSAGGHLG----RFRYTNVSDLSMYAKMVKEKTFPYDYR 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-ERVQFSRLR 377
              S +++A E L MGLR +EG+ +K  E L      +     LQ++     +V+  ++ 
Sbjct: 296 HENSEDEEALETLFMGLRTKEGVELKRVERL------MFLVEKLQKEYACYVKVKDGKIF 349

Query: 378 CTQRGMTMLDSVIANLA 394
            ++ GM +   +  +L 
Sbjct: 350 LSEEGMDLSKKIFEDLI 366


>gi|212697099|ref|ZP_03305227.1| hypothetical protein ANHYDRO_01664 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675874|gb|EEB35481.1| hypothetical protein ANHYDRO_01664 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 374

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 114/376 (30%), Positives = 198/376 (52%), Gaps = 13/376 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDF +     +   +++ ++   E+    Q      + SI+ 
Sbjct: 2   EKIGIYIHIPFCKKKCFYCDF-TAFPNLESRIDSYFENLKKEIILY-QKNMDVEVDSIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ ++ + I  I+D + K + +S   E TIEANP+S+ +   + Y+  G+NRISLG
Sbjct: 60  GGGTPTYVDFKYIEEIIDQL-KIFDLSHVKEFTIEANPNSLSLEKLKAYKSLGINRISLG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +++ L+ +GR+HN    +  I   R   F  +S D+I  LP       + +L+   
Sbjct: 119 VQSFDDEVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEIIK 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLS Y L +EKG+ FY ++K   L L  +++  D+++  ++     GL+ YEISN
Sbjct: 179 KINPQHLSYYSLILEKGSHFYSIYKKDKLKLMDDDLERDIFSYIENYLKNLGLNRYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    ES HN  YW  G Y+  G GA   +    +    +  K    +  ++ +    V
Sbjct: 239 FSKKDFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVK----YENLINEGKFPV 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
             +EF+S++++  E+++  LR  EGI +K++E + G +L  +  + ++   ++GF E   
Sbjct: 295 EFREFISNDEREKEYIIFKLREVEGIDLKEFENIFGHSLLEKYGKVIEKFYKEGFFEI-- 352

Query: 373 FSRLRCTQRGMTMLDS 388
              L+ T +G  + + 
Sbjct: 353 NQSLKFTHKGFDLSNE 368


>gi|325847867|ref|ZP_08170089.1| putative coproporphyrinogen dehydrogenase [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480885|gb|EGC83938.1| putative coproporphyrinogen dehydrogenase [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 374

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 115/376 (30%), Positives = 199/376 (52%), Gaps = 13/376 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC KKC YCDF +     +   +++ ++   E+    Q      + SI+ 
Sbjct: 2   EKIGIYIHIPFCKKKCFYCDF-TAFPNLESRIDSYFENLKKEIILY-QKNMDVEVDSIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ ++ + I  I+D + K + +S   E TIEANP+S+ +   + Y+  G+NRISLG
Sbjct: 60  GGGTPTYVDFKYIEEIIDQL-KIFDLSHVKEFTIEANPNSLSLEKLKAYKSLGINRISLG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +++ L+ +GR+HN    +  I   R   F  +S D+I  LP       + +L+   
Sbjct: 119 VQSFDDEVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEIIK 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLS Y L +EKG+ FY ++K   L L  +++  D+++  ++     GL+ YEISN
Sbjct: 179 KINPQHLSYYSLILEKGSHFYSIYKKDKLKLMDDDLERDIFSYIENYLKNLGLNRYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S    ES HN  YW  G Y+  G GA   +    +    +  K    +  ++ +    V
Sbjct: 239 FSKKDFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVK----YENLINEGKFPV 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
             +EF+S++++  E+++  LR  EGI +K++E + G +L  +  + ++   ++GF E  Q
Sbjct: 295 EFREFISNDEREKEYIIFKLREVEGIDLKEFENIFGHSLLEKYSKIIEKFYKEGFFEIDQ 354

Query: 373 FSRLRCTQRGMTMLDS 388
              L+ T +G  + + 
Sbjct: 355 S--LKFTHKGFDLSNE 368


>gi|296393790|ref|YP_003658674.1| oxygen-independent coproporphyrinogen III oxidase [Segniliparus
           rotundus DSM 44985]
 gi|296180937|gb|ADG97843.1| oxygen-independent coproporphyrinogen III oxidase [Segniliparus
           rotundus DSM 44985]
          Length = 405

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 120/395 (30%), Positives = 184/395 (46%), Gaps = 19/395 (4%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMR-- 63
           +++T       GVYVH PFC  +C YCDFN++      G+     +  +   E+      
Sbjct: 19  DSLTPSQGAPFGVYVHVPFCASRCGYCDFNTYTPSELGGRSGTAEWFTAVEQELDLAAKA 78

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L  P  +S++F GGGTPSL+    +A +L  +++ + ++ + E T EANP S     
Sbjct: 79  LSHLGEPPPVSTLFVGGGTPSLLGAAGLARVLSAVSRRFPLAGSFEATCEANPESTSPAF 138

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALP 180
           F+G R AG  R+SLG+QS     L  L R H       AA       F  ++ DLIY  P
Sbjct: 139 FEGIRAAGYTRVSLGMQSAAAHVLAALDRAHTPGRAPQAAAEARAAGFEHVNLDLIYGTP 198

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++       L    +  VDH+S Y LT+  GT   +    G L  P ++V  + +++  
Sbjct: 199 GESEADLASSLAAVAAAPVDHVSAYALTVHAGTALGRAVAKGQLAAPDDDVLAERHDVVD 258

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
               A G   YE+SN +    A   HN+ YW+ GD+ G GPGAHS V      V     K
Sbjct: 259 KALRAAGFDWYEVSNWAKGPQARCWHNMGYWQGGDWWGAGPGAHSHVNG----VRWWNVK 314

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           HP     ++      V   E L+++++  E +M+GLRLREG+          R+ +++C 
Sbjct: 315 HPARHAALIASGEPPVAGYETLTAQERHTEDVMLGLRLREGLERTVL-----RSSELDCA 369

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L  +G +   Q  R+        + D + A L 
Sbjct: 370 ERLIAEGLLVDRQ-GRIALAPSARMLADGLSATLL 403


>gi|307705108|ref|ZP_07641987.1| coproporphyrinogen III oxidase [Streptococcus mitis SK597]
 gi|307621339|gb|EFO00397.1| coproporphyrinogen III oxidase [Streptococcus mitis SK597]
          Length = 336

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 111/330 (33%), Positives = 183/330 (55%), Gaps = 10/330 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +S+++ GGGTP+ +    + ++L G+ KN  +S   E+TIEANP  ++ +     + + 
Sbjct: 12  KLSTLYIGGGTPTALSASQLEVLLKGLTKNLDLSVLEELTIEANPGDLDADKIAVLKNSA 71

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           VNR+SLGVQ+ +++ L+ +GR+H   +    I   +   F  +S DLIYALP QTM Q +
Sbjct: 72  VNRVSLGVQTFDDKMLKKIGRSHLEKDIYENIDRLKLAGFDNISIDLIYALPGQTMEQVK 131

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             + +A+   + H+SLY L +E  T+F    + G L LP E +  +++    +     G 
Sbjct: 132 ENVAKAIGLDIPHMSLYSLILENHTVFMNRMRRGKLPLPKEELEAEMFEYIIAELERVGF 191

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN S  G ES HNL YW   +Y GIG GA   V    ++    I      +L  V
Sbjct: 192 EHYEISNFSKPGFESRHNLMYWDNAEYYGIGAGASGYVNGVRYKNHGPI----RHYLSAV 247

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQ 365
            + G+A + +E LS ++Q +E + +GLR + G+S+  +E   GR+ D    E  R+L +Q
Sbjct: 248 EE-GNARITEEHLSQKEQMEEEMFLGLRKKSGVSMARFEEKFGRSFDGLYGEIVRDLVQQ 306

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G + +++  R+R T+RG+ + D+V     +
Sbjct: 307 GLM-QIEGDRVRMTKRGLFLGDTVAERFIL 335


>gi|238927752|ref|ZP_04659512.1| possible coproporphyrinogen dehydrogenase [Selenomonas flueggei
           ATCC 43531]
 gi|238884468|gb|EEQ48106.1| possible coproporphyrinogen dehydrogenase [Selenomonas flueggei
           ATCC 43531]
          Length = 389

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 128/392 (32%), Positives = 192/392 (48%), Gaps = 15/392 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR- 69
             +G  + G+YVH P+CVKKC YCDF S     +  + E++  +   E+         R 
Sbjct: 3   RAEGRQTWGIYVHIPYCVKKCAYCDFVSVPSAQRGAEMEDYAAALTAEILREVPPLRARW 62

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
              ++I+ GGGTP+ +    +  +L  +         +E ++EANP +V+       R A
Sbjct: 63  GDAATIYVGGGTPTALPAPLLTGVLHTLTAAAG--EPLECSVEANPGTVDEVYLGALRAA 120

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQS +++ LR +GR H A EA  A H AR   F  +S DL+Y LP QT+ + 
Sbjct: 121 GANRLSLGVQSFDDELLRAVGRIHTAEEAERAFHAARAAGFGNISIDLMYGLPGQTLDRL 180

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 A + A +HLS+Y LTIE+GT F  M   G L LP+E+ A ++Y+   +   A G
Sbjct: 181 RRSAAAAAALAPEHLSVYGLTIEEGTPFAAMQAAGRLNLPTEDAAEEMYDFLMAELPARG 240

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YEI+N +  G ES HN  YW    Y+G+G  AH  V      V  + E    S+++ 
Sbjct: 241 YARYEIANFARRGFESRHNRGYWHMTPYLGLGAAAHGYVDG----VRWANEADTPSYIRA 296

Query: 308 VRKNG-HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQ 363
           VR        E    + E+  +E+  + LR  EGI   D+    GR+L+        +  
Sbjct: 297 VRAGTCVRTPEDGARTRERAMEEYAFLALRTAEGIDAADFHRCWGRDLEDVYGAVIAHYV 356

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             G + R     +  T  GM + + V A   +
Sbjct: 357 GLGLLRRTAAG-IALTPAGMKLGNEVFAAFLL 387


>gi|110598130|ref|ZP_01386408.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium ferrooxidans DSM 13031]
 gi|110340262|gb|EAT58759.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium ferrooxidans DSM 13031]
          Length = 377

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 118/378 (31%), Positives = 186/378 (49%), Gaps = 9/378 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC  +C YCDF        V  E F ++   E  +   +   R+IS+I FGG
Sbjct: 2   LSLYVHIPFCRSRCSYCDFYLVTATKHV--EAFFRALALETAFRAPMLQGRTISAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    +A  L+ +A   T S ++EI +EANP  +     +G R AG+ R+S+G+Q
Sbjct: 60  GTPSMVPVHYLAGWLEQVAALCTFSPDIEIALEANPEDLAAGAMEGIRAAGITRLSIGLQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ LR LGR H A E++     A   F  +S DLI  +P + M  W+ ++++A+   
Sbjct: 120 SFTDEKLRALGRAHTALESMQVTERALKHFDSVSVDLICGVPGEKMPLWKADMEQAVMLR 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L++E  TL ++   +G + +  E+V  DLY          G H YE+SN   
Sbjct: 180 PQHISVYMLSVEPKTLLHRNLMNGSITVLDESVQADLYEYAGRKLGEEGYHHYEVSNFCL 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S +NL  W+   YIG GP AHS    G   +  +       ++      G     +
Sbjct: 240 GNHHSRYNLASWKRQPYIGFGPSAHSFYCSGGREIRTANVSALSRYIANPEAVGS---FR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEM--LAGRNLDIECERNLQRQGFIERVQFSRL 376
           E L+ E+   E + + LR+  G+ V+        G  L     R  + +G+I R+   RL
Sbjct: 297 EELTDEEIFTEKVFLALRINSGLCVEFLRKDNKLGLRLSERIAR-FEAKGWI-RLAEERL 354

Query: 377 RCTQRGMTMLDSVIANLA 394
             T++G    D +  +L 
Sbjct: 355 YLTEKGFLFADLIAGDLI 372


>gi|222100383|ref|YP_002534951.1| Oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           neapolitana DSM 4359]
 gi|221572773|gb|ACM23585.1| Oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           neapolitana DSM 4359]
          Length = 374

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 120/377 (31%), Positives = 182/377 (48%), Gaps = 14/377 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH PFC KKC YCDF S         E ++     E++  R +     I +++FGG
Sbjct: 3   LAVYVHIPFCKKKCVYCDFYSVAS---EDFEEYLSLVFEEIELYRDVLKESEIETVYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  +  IL+ + +     S +E TIE NP SV+    + YRK G+NRISLGVQ
Sbjct: 60  GTPSLVPPSFLEKILEKLKEVSKKFSPLETTIEVNPESVDREKLRSYRKMGINRISLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+  GR ++         L    F  ++FD I  LP +T    E  L     + 
Sbjct: 120 SCDDGVLKKCGRLYDEKMLKEKAELVLAEFDNVNFDFILGLPGETDETLEKNLHFLEEFT 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLY L +++ T  Y + K   L LP  +     +++      + G   YEISN + 
Sbjct: 180 PQHVSLYFLEVDENTPLYSLLKKNLLTLPDSDEVERRHDVFVEFLKSRGFERYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HNL YWR  DY+G GP A   +     R   +       + KMV++       +
Sbjct: 240 PERESRHNLFYWRNHDYLGFGPSAGGHLG----RFRYTNVSDLSMYAKMVKEKTFPYDYQ 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-ERVQFSRLR 377
              + E++A E L MGLR +EG+ +K  E L      +     LQ++     +V+  ++ 
Sbjct: 296 HKNTEEEEALEILFMGLRTKEGVELKRVERL------MFLVEKLQKEYACYVKVKDGKIF 349

Query: 378 CTQRGMTMLDSVIANLA 394
            ++ GM +   +  +L 
Sbjct: 350 LSEEGMDLSKKIFEDLI 366


>gi|326624851|gb|EGE31196.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
          Length = 345

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 115/353 (32%), Positives = 186/353 (52%), Gaps = 15/353 (4%)

Query: 47  GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
             ++++Q  L ++         R + +IF GGGTPSL+    +  +LDG+     ++++ 
Sbjct: 2   PHDDYVQHLLNDLDADVAWAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLNLAADA 61

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           EIT+EANP +VE + F  Y++AGVNRIS+GVQS  E  L+ LGR H   EAI A  LA  
Sbjct: 62  EITMEANPGTVEADRFIDYQRAGVNRISIGVQSFSEPKLKRLGRIHGPQEAIRAARLANG 121

Query: 167 IFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           +  R  + DL++ LP QT+ +   +L++A++    HLS YQLTIE  TLF         V
Sbjct: 122 LGLRSFNLDLMHGLPDQTLEEALNDLRQAIALNPPHLSWYQLTIEPNTLFGSRPP----V 177

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
           LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH +
Sbjct: 178 LPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGK 237

Query: 286 VKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           V     R+  + + +HP  +++     G     +  +S + +  EF M   RL +     
Sbjct: 238 VTFPGGRILRTTKTRHPRGYMQ-----GRYQESQRDVSDDDKPFEFFMNRFRLLKRAPRA 292

Query: 345 DWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++    G    +  +       QG++   +    + T+ G   L+S++  L +
Sbjct: 293 EFVDYTGLTEAVIRQPIDEAIAQGYLTECE-QYWQITRHGKLFLNSLL-ELFL 343


>gi|207723804|ref|YP_002254202.1| cog0635, coproporphyrinogen III oxidase and related fe-s
           oxidoreductases protein [Ralstonia solanacearum MolK2]
 gi|206589009|emb|CAQ35971.1| cog0635, coproporphyrinogen III oxidase and related fe-s
           oxidoreductases protein [Ralstonia solanacearum MolK2]
          Length = 405

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 121/357 (33%), Positives = 194/357 (54%), Gaps = 11/357 (3%)

Query: 44  YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
             + +E F+ +   +++    +   R + +IF GGGTPSL+  Q +  +L  I     V 
Sbjct: 51  QGIPEERFLAAVRQDLEAALPMVWGRRVHTIFIGGGTPSLLSAQGLDTLLSDIRMLLPVD 110

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
           ++ EIT+EANP + E   F+ Y  +GVNR+S+G+QS  +  L+ LGR H+A+EA AAI +
Sbjct: 111 ADAEITMEANPGTFEAERFRSYHASGVNRLSIGIQSFNDAHLQALGRIHSAAEARAAIDI 170

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           AR  F  ++ DL++ALP QT+ + E +++ ALS+   H+SLY LT+E  T F K      
Sbjct: 171 ARAHFDNINLDLMFALPGQTLAECEADVEAALSFETSHVSLYHLTLEPNTYFAKYPP--- 227

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
             LP ++ A  + +   +  +A G   YE+S ++  G    HNLNYW++GDY+GIGPGAH
Sbjct: 228 -ALPDDDTAFGMQDWIHARLAAAGYEHYEVSAYARPGKRCKHNLNYWQFGDYLGIGPGAH 286

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGI 341
            ++      +     +HPE++L+     G A V  E+  + +     EF++  LRL  G 
Sbjct: 287 GKLSFPHRVLREMRHRHPETYLRQAETAGGAAVLQEQREVDAADLPFEFMLNALRLTGGF 346

Query: 342 SVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            V  ++   G  L    ER L   +++G + R     +R T+ G   L+ + A    
Sbjct: 347 PVTLFQERTGLPLR-AIERELDAAEQRGLLAR-DHVAIRPTELGQRFLNDLQALFLA 401


>gi|332140337|ref|YP_004426075.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550359|gb|AEA97077.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 341

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 183/346 (52%), Gaps = 14/346 (4%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           +   L ++    +  G R + +IF GGGTPSL     +A IL+G+     +S N EIT+E
Sbjct: 1   MAHLLDDLAIDAKRIGDRVVETIFIGGGTPSLFSADAMADILNGVKARVNLSDNAEITME 60

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PR 170
           ANP +VE   F G+ +AGVNRIS+G+QS + + L+ LGR HN S+A  A+  A +   P 
Sbjct: 61  ANPGTVEAGKFAGFYQAGVNRISVGIQSFQPKHLKVLGRIHNESQAENAVKQAHSAGLPT 120

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            + DL++ LP+Q++     +L++ ++    HLS YQLTIE  T FY         LP ++
Sbjct: 121 FNLDLMHGLPEQSVDNAMSDLKQGIALNPYHLSWYQLTIEPNTPFYSKPP----ELPDDD 176

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
           +  ++      +    G   YEIS ++  G +  HNLNYWR+GDY+GIG GAH ++   +
Sbjct: 177 ILWEIQEQGHKLLENAGYQQYEISGYAKAGHQCRHNLNYWRFGDYLGIGCGAHGKITDAA 236

Query: 291 HRVAISI--EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           +         KHP  +++M   +   +  +  + +     EF M   RL E   + D+  
Sbjct: 237 NGTIHRTVKVKHPRGYMEM---SRPYLDTQSQVEAGDLPFEFFMNRFRLVEPCPISDFSD 293

Query: 349 LAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             G  +  E ER L   Q QG +  +  +  + T +G   L+S+++
Sbjct: 294 FTGIAITDEVERALCDAQHQGLLS-ISDTHWQVTAKGRRYLNSLLS 338


>gi|21674821|ref|NP_662886.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlorobium tepidum TLS]
 gi|21648040|gb|AAM73228.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlorobium tepidum TLS]
          Length = 375

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 124/378 (32%), Positives = 185/378 (48%), Gaps = 8/378 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC ++CPYCDF    R      E F ++   E      L   +SI +I FGG
Sbjct: 2   ICLYLHIPFCRERCPYCDFFLVTR--PGFVERFFEALAVETAAKAALFAGQSIKAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P  I   L  I+    +S+  EIT+EANP  +   +    +  GVNR+S+GVQ
Sbjct: 60  GTPSLVPPSFIDGWLSQISGIARISAETEITLEANPEDLLPASLDALQSVGVNRLSIGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ LR LGR H+A++A   +  A   FP +S DL+     + + +WE +L+ AL   
Sbjct: 120 SFADRKLRALGRAHSAADARRVVLEALERFPSVSIDLMCGAEGEMLAEWEGDLRAALDLC 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LT+E+ T  ++  + G   LP E     +Y +   +    G   YEISN + 
Sbjct: 180 PQHISIYMLTLEEKTRLWRDVRKGLRDLPGEEAQAAMYRMAAELLGNAGYGHYEISNFAL 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +NL  W    Y+G GP AHS +  G      S       +L        AV  +
Sbjct: 240 EGHHSRYNLASWMREPYLGFGPAAHSFLVDGDAETRFSNVSSLTRYL---TDPVGAVDFR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE--MLAGRNLDIECERNLQRQGFIERVQFSRL 376
           E L+  Q+ DE + + LR+R+ +SV         G     +    LQ +G+I  V+   +
Sbjct: 297 EVLTEAQRFDEEVFLSLRIRKPLSVGFLRKGHKLGHQHLDDILVTLQEKGWIG-VKKGTV 355

Query: 377 RCTQRGMTMLDSVIANLA 394
             T+ G    D V A L 
Sbjct: 356 TLTEEGFLFADHVAAELL 373


>gi|160880446|ref|YP_001559414.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           phytofermentans ISDg]
 gi|160429112|gb|ABX42675.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           phytofermentans ISDg]
          Length = 408

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 121/387 (31%), Positives = 187/387 (48%), Gaps = 13/387 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L +Y+H PFC +KC YCDF S           +      E++    L     + SIF
Sbjct: 23  KKDLELYIHIPFCARKCNYCDFLSGQASQDE-MLKYTDFLCKEIKNQGSLPLEYRVVSIF 81

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPSL+  + I  I D I + + +    EITIE NP +V  +   GY    +NR+S 
Sbjct: 82  FGGGTPSLLPLEQIGRIFDKIKECFEIVPTCEITIECNPGTVTKDKLFGYYNLEINRLSF 141

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QS   + LR LGR H   E +     AR   F  ++ DL+ ALP Q +  +E  L++ 
Sbjct: 142 GLQSANNEELRLLGRIHTFEEFVENYEHAREVGFQNINIDLMSALPYQNLESYETTLEKV 201

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           L    +H+S Y L +E+GT FY+    H D    +P   +   +Y  T+ I  +HG + Y
Sbjct: 202 LKLKPEHISAYSLILEEGTSFYERFSEHGDEKDAIPDVILDRLMYEHTKEILLSHGYNRY 261

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN++  G E LHN+ YWR  DY+G+              V          + K ++ +
Sbjct: 262 EISNYAKPGRECLHNIGYWRRIDYLGL----GLGSSSLLDHVRYRNLDTMNEYEKALKSS 317

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFI 368
                 +E LS   + +EF+ +GLRL +G+S K++E     ++D         LQ+ G +
Sbjct: 318 LKVRQVEEMLSKNAEMEEFMFLGLRLSKGVSKKEFEQQFLVSMDEIYGTKLMELQKNGLL 377

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +    +  T RG+ + + V+    +
Sbjct: 378 -MIDEVYVSLTDRGIDVSNQVLVEFLL 403


>gi|262182977|ref|ZP_06042398.1| oxygen-independent coproporphyrinogen III oxidase [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 310

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 151/314 (48%), Gaps = 8/314 (2%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSI 74
           +  G+Y+H PFC  +C YCDFN++      G    +++ +   E++    +   R   ++
Sbjct: 2   DPFGLYIHVPFCASRCGYCDFNTYTPGELGGDLTSDYLVALEKELEM-AAVQVDREAETV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSL+  + +  +L  +   + ++   E+T E+NP S     F G   AG  R+S
Sbjct: 61  FIGGGTPSLLGAEGLGRVLSKVRDTFGLAPGAEVTTESNPESTSPEYFAGLLDAGFTRLS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS     L  L R H    A  A   A    F  ++ D+IY  P +      + L+R
Sbjct: 121 LGMQSASPGVLAVLERAHTPGRAFDAAREAIAAGFEHVNLDMIYGTPTEEDADVALTLER 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   VDH+S Y L +E GT   +    G L  P E+V    Y +  S   A G   YE+
Sbjct: 181 ALETGVDHISAYSLIVEDGTRMARKVSKGLLPAPDEDVLARRYEMISSTLEAEGFEWYEV 240

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G E  HN  YW  G++ G GPGAHS +            K+P +++K V +   
Sbjct: 241 SNWAKPGGECQHNRIYWVDGNWWGAGPGAHSHLGNERFYNV----KNPRTYIKAVGEGEL 296

Query: 314 AVVEKEFLSSEQQA 327
            + E+E L+   + 
Sbjct: 297 PIKEREQLTEADRH 310


>gi|213962677|ref|ZP_03390938.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sputigena Capno]
 gi|213954672|gb|EEB65993.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sputigena Capno]
          Length = 402

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 96/384 (25%), Positives = 179/384 (46%), Gaps = 16/384 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             +Y+H PFC + C YCDF  H       +   + +   E+   +       + +++ GG
Sbjct: 21  YSLYIHIPFCRRACHYCDF--HFSTTLKRKGEMVNALCKELILRKDEAINSELQTVYLGG 78

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN-----NFQGYRKAGVNRI 133
           GTPS++    +  +   I   + VS + EIT+EANP     +       +  R  G+NR+
Sbjct: 79  GTPSILSYDELQQLFHTIFTYYKVSPSAEITLEANPDDFFRDSSPQQMLEQLRSLGINRL 138

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS  E+ L+ + R H+ ++    + +    F  ++ DLIY +P+ +  +W+  + +
Sbjct: 139 SLGVQSFFEEDLQLMNRVHSVAQVETLLQITPQYFDNITIDLIYGIPQMSKERWQENINK 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS+ + H+S Y LT+E+ T  +K    G +   ++  A   + +        G   YE 
Sbjct: 199 ALSFDIPHISAYALTVEEKTALHKFIATGKIPPINDEQAYTHFQILIDTLEKEGFIQYEF 258

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN    G  S +N  YW    Y+GIGP AHS              K    +++ +++   
Sbjct: 259 SNFGKEGYFSKNNTAYWFGKPYMGIGPSAHSFNGKERSWNIAHNIK----YIQQIQQGIL 314

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIER 370
              EKE L+   + +E ++  +R   GI +++  ++ G +      +  Q+      +  
Sbjct: 315 P-QEKEELTLNNRYNELIITRIRTIVGIDLEEVRIVFGDDYRQYLLQQAQKYLADELLT- 372

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           ++ + L+ T +G  + D + ++L 
Sbjct: 373 IEENHLKVTHKGKFLSDGIASDLF 396


>gi|303229101|ref|ZP_07315903.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516225|gb|EFL58165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 392

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 185/386 (47%), Gaps = 13/386 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---IS 72
              +G+Y+H PFC +KC YCDF ++ +  +   + ++ + + EM              + 
Sbjct: 11  QRDMGIYIHIPFCKQKCIYCDFPAY-QNLEEYYDTYLYALVQEMTMFGDAYPKSRTKLVD 69

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +    +  IL+ I  N+ VS + + TIE+NP  V+    +G  K G +R
Sbjct: 70  TVYLGGGTPTELSLLQLEQILNTIKTNYNVSPDCQFTIESNPGEVDQAYLKGLHKLGFSR 129

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS GVQ+  ++SL  L R+HN  +AI A+  A    F  ++ DLIY LP QT  +    L
Sbjct: 130 ISFGVQTFNDKSLVSLHRSHNREDAINAVQWAFKEGFQDINIDLIYGLPNQTTDEINKNL 189

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               +  ++H+S Y L +E+GT  Y +   G + LP E+    +Y++        G   Y
Sbjct: 190 DIVSTLPINHISTYGLQVEQGTRLYHLVDKGVISLPDESTEDTMYDMMMQGIQDLGFERY 249

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +   A S HNL YW+Y DY+G G GAHS           ++      + + +   
Sbjct: 250 EISNFAKDKAYSKHNLKYWQYCDYLGFGAGAHSFFDSVRRANNRNVMP----YARKIDCF 305

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              VV++E + S++  +++  + LR + GI+  D+       L+        NL  +  I
Sbjct: 306 EFPVVDEEVIDSKRAREDYCFLSLRTKWGINTVDFANRFNIRLEDIYGSILENLIEKNLI 365

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
            +        T  G    + V +   
Sbjct: 366 IQ-DGDLYYLTPEGAKHGNYVFSEFI 390


>gi|218132899|ref|ZP_03461703.1| hypothetical protein BACPEC_00760 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991772|gb|EEC57776.1| hypothetical protein BACPEC_00760 [Bacteroides pectinophilus ATCC
           43243]
          Length = 391

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 113/397 (28%), Positives = 189/397 (47%), Gaps = 25/397 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPR 69
           M    +  +G+Y+H PFC++KC YCDF S      V  EN+I + + E+  +        
Sbjct: 2   MNTDKNKQIGMYIHIPFCIRKCKYCDFVSEAASDFV-HENYINALIDEINGYDAGQLEGY 60

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRK 127
            + S+F GGGTPS ++ + I+ I+  + +++        EITIE NP +V   N + YR 
Sbjct: 61  GLRSVFIGGGTPSAVKAEYISRIMTAVKEHFADICGHLTEITIECNPGTVTAENLRIYRD 120

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG+NR+S G+QS  +  L  +GR H   +   +  LA    F  ++ DL++ LP QTM  
Sbjct: 121 AGINRLSFGLQSAIDSELECIGRIHTWDDFKNSYRLAHEAGFENVNVDLMFDLPDQTMDT 180

Query: 187 WEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLV----LPSENVAVDLYNLTQ 240
           W+  L    +      H+S Y L +E+GT      +         +  E+    +Y+  Q
Sbjct: 181 WKRTLADVCALEPKPSHISAYSLILEEGTPLAAQIESEREQGIDRMADEDTDRAMYHYAQ 240

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           S  +  G H YEISN +    ES+HNL+YW   +YIG G  A S       R    I+++
Sbjct: 241 SYLAGEGYHQYEISNFAMPSMESIHNLSYWECKEYIGFGVAAASNKGDLRCRNTYDIDRY 300

Query: 301 PE-SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE-GISVKDWEMLAGRNLDI-- 356
              +W            + E L+   +  EF+ +GLR+   G+  ++++     + D   
Sbjct: 301 IAGAWQDK--------EDIEHLTERDRMSEFVFLGLRMTSAGVDTEEFKKRFAVSFDEVF 352

Query: 357 -ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
            +       +G +  +   RL  T  G+ + + ++A+
Sbjct: 353 GDVTAGYIEKGLLS-MNDGRLTLTPHGIDVSNVIMAD 388


>gi|238759333|ref|ZP_04620499.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia aldovae ATCC 35236]
 gi|238702494|gb|EEP95045.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia aldovae ATCC 35236]
          Length = 333

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 120/345 (34%), Positives = 191/345 (55%), Gaps = 17/345 (4%)

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           + ++     L   R IS+IF GGGTPSL+  + +  +LDG+     V+++ EIT+EANP 
Sbjct: 1   MADLDADVPLVNGREISTIFIGGGTPSLLSAEAMQQLLDGVRARLPVATDAEITMEANPG 60

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFD 174
           +VE + F GY++AG+NRIS+GVQS   Q L  LGR H   EAI A  LA ++  R  + D
Sbjct: 61  AVEADRFSGYQRAGINRISIGVQSFSAQKLTRLGRIHGPDEAIRAAELATSLNLRSFNLD 120

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L++ LP QT+ +   +L++A++    HLS YQLTIE  T F         VLP ++   D
Sbjct: 121 LMHGLPDQTLEEALDDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP----VLPDDDALWD 176

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           ++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH ++     R+ 
Sbjct: 177 IFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFSDGRIL 236

Query: 295 ISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR- 352
            +I+ KHP  +++     G  + ++  +++  +  EF M   RL E     D+    G  
Sbjct: 237 RTIKTKHPRGFMQ-----GKYLDKQYEVAAVDRPFEFFMNRFRLLEAAPRADFTHFTGLA 291

Query: 353 --NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              +  + +  L ++  IE  ++   + T++G   L+S++  L +
Sbjct: 292 ESTIRPQLDEALAKEYLIETAEY--WQITEKGKLFLNSLL-ELFL 333


>gi|67921337|ref|ZP_00514856.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Crocosphaera watsonii WH 8501]
 gi|67857454|gb|EAM52694.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Crocosphaera watsonii WH 8501]
          Length = 417

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 189/405 (46%), Gaps = 31/405 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV------GQENFIQSFLTEMQWMRQLTGPRSI 71
            +  Y+H PFC ++C YCDF   V   K           ++Q    E++        R +
Sbjct: 6   PVSAYLHIPFCRRRCYYCDFPISVLGDKTNTNTSGSISEYVQFLCEEIKITPTY--NRPL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPSL+ P+ +  IL  + + + + ++ EI++E +P +  +     Y+  GVN
Sbjct: 64  KTVFFGGGTPSLLPPRYLDKILATLDQQFGICADAEISMEIDPGTFSLEQLSDYKTLGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R SLG+QS +++ L   GR H   +   +I           S DLI  LP QT+  W+  
Sbjct: 124 RFSLGIQSFDDKLLEKSGRFHRYKDIEQSIDFIYKTNIINFSLDLISGLPYQTLEDWKSS 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+     H+S Y L +E  T F K +K G   LP ++  + +Y + Q I +  G   
Sbjct: 184 LEKAIKIQPSHISCYDLVLEPVTAFGKQYKPGKFPLPDDDNTMLMYKMGQRILTEAGYEH 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN++  G + LHNL YW    Y  +G GA S              K    W++ +++
Sbjct: 244 YEISNYAQQGYQCLHNLVYWENKPYYALGMGAASYSNNQRF-TRPRTRKDYYQWIEKLKQ 302

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--------LDIECERNL 362
           + +++ + ++L +     E  M+GLRL++G+         G +        L    ++ L
Sbjct: 303 SDYSL-DCDYLDTIDIILETFMLGLRLKKGVDWSKIYTSFGEDIIKLIYKILLPYYQQKL 361

Query: 363 -----QRQGFIERVQFSRL----RC---TQRGMTMLDSVIANLAV 395
                    FI  ++ + L    R       G  + ++++A+L  
Sbjct: 362 VYFQDINDKFITEIKDNNLHDINRVMLSDPDGFLLSNTILADLFA 406


>gi|325105239|ref|YP_004274893.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
 gi|324974087|gb|ADY53071.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
          Length = 377

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 106/380 (27%), Positives = 179/380 (47%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +++ +++   E+   +       I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTSLKYKDDMLKAINREILLQKNFLQNEKIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  I + I + +     VE+T+E NP  +        +   VNR S+G+QS
Sbjct: 61  TPSLLTSDEINKITEQIQRYYIADELVEVTLETNPDDLSSQKIAALKHTPVNRFSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+++ R H A EA  AI  +++  F  ++ DLIY  P  T  +W++ + + L+  
Sbjct: 121 FFNEDLKWMNRAHQAKEAEFAIKASQDAGFENLTVDLIYGYPLLTKEKWDLNINQVLAMD 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y +T+E  T      K G      +  + + +    +    +G   YEISN + 
Sbjct: 181 IPHVSCYSMTVEPKTALASFIKKGIDKNMDDTKSAEQFLHLSAKLQENGFEHYEISNFAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S+HN NYWR   Y+GIGP AHS           +       +++ + K+     EK
Sbjct: 241 GNKYSVHNTNYWRGVKYLGIGPSAHSFDGKDRQWNIANN----ALYMQSLGKDNIP-AEK 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
           EFLS + + +E++M  LR   G+ +             E  +N+ +   + +IE      
Sbjct: 296 EFLSPKDRVNEYIMTALRTMWGLDLNKINSDFPV-FKAEISKNMNQFFEKDWIEEKDN-H 353

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +  T +G    D + A L +
Sbjct: 354 IILTTKGKLYADHIAAELFI 373


>gi|319790666|ref|YP_004152299.1| oxygen-independent coproporphyrinogen III oxidase [Thermovibrio
           ammonificans HB-1]
 gi|317115168|gb|ADU97658.1| oxygen-independent coproporphyrinogen III oxidase [Thermovibrio
           ammonificans HB-1]
          Length = 376

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 125/378 (33%), Positives = 187/378 (49%), Gaps = 19/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KC YCDF S   R K G   +++  LTE+  ++         +++FGGG
Sbjct: 7   ALYVHVPFCRSKCFYCDFYSEAGRTKDG---YVKLLLTELSLLQPELQ--QFPTVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+EP     +L  + +        E+T+E NP        +  R+ GVNR+S+GVQS
Sbjct: 62  TPSLMEPSFFETLLSRVGQFS------EVTVEFNPEDATPQKLRALRELGVNRVSIGVQS 115

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L + +L+ L R H A + + A+  A  +F  +S DLIY +P Q   ++  EL+  LS  V
Sbjct: 116 LSDTTLKALRRRHTARQGLKAVEEALKVFNNVSVDLIYGVPGQRPEEFLRELETLLSLPV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY LT    T   ++ + G + LP E    + Y L   +    GL  YEISN +  
Sbjct: 176 KHVSLYALTPYSETQLGRLVELGKVELPPEEQVEECYRLGAKLLEEKGLKRYEISNFALE 235

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G    HNL+YWR  +Y+GIGP A S       R   S     ES+ + +        E+ 
Sbjct: 236 GFRCKHNLHYWRLNNYLGIGPSAASFSDSRYRRNVSS----LESYERKLAAGELPTAEEV 291

Query: 320 FLSSEQQADEFLMMGLRLREGISVKD--WEMLAGRNLDI-ECERNLQRQGFIERVQFSRL 376
             S ++  +  L  GLRL EG+ ++    +      L   E    +  +G +E     RL
Sbjct: 292 KFSPDELKEVKLSFGLRLTEGVELEALGLKEWFQELLAADEAIGAMVEEGLLE-FSGGRL 350

Query: 377 RCTQRGMTMLDSVIANLA 394
           R  ++G+   ++VIA L 
Sbjct: 351 RLGEKGVLTSNAVIATLL 368


>gi|292670103|ref|ZP_06603529.1| coproporphyrinogen dehydrogenase [Selenomonas noxia ATCC 43541]
 gi|292648291|gb|EFF66263.1| coproporphyrinogen dehydrogenase [Selenomonas noxia ATCC 43541]
          Length = 385

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 128/388 (32%), Positives = 200/388 (51%), Gaps = 15/388 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SIS 72
           S + G+Y H P+CVKKC YCDF S  V   +   E++  +   E+         R    +
Sbjct: 3   SKAWGIYAHIPYCVKKCAYCDFISAAVGTNEAEMEDYAAALRAEILREAPPLRARFGDAA 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTP+++    +A I++ I +     +  E T+EANP +V+ ++    R AG +R
Sbjct: 63  TIYIGGGTPTVLPAALLAGIIETIREAAG--TPTECTVEANPGTVDEDDLTQLRAAGADR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQS +++ LR +GR H A+EA AA H AR   F  +S DL+Y LP QT+   +  +
Sbjct: 121 LSLGVQSFDDRLLRVIGRIHTAAEARAAFHAARAAGFRNISIDLMYGLPTQTLADLKHSV 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL+ A +H+S+Y L +E+GT F      G L LP+E+ A ++Y+       A G   Y
Sbjct: 181 AAALALAPEHISVYGLIVEEGTPFAAAEAAGRLALPTEDAAEEMYDWLMGELPAQGFVRY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G ES HNL YWR   Y+G+G GAH         V  + E    +++  +R +
Sbjct: 241 EISNFARAGFESRHNLGYWRSVPYLGVGAGAHGYADG----VRWANESDTHAYISGIRAD 296

Query: 312 GHA-VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGF 367
                 E    +     +E+  + LR  EGI  +D+    G  +D      + +   QG 
Sbjct: 297 MSVRTPEDAERTRANAMEEYAFLALRTAEGIDEEDFRRTFGAAMDEVYADVIAKYTAQGL 356

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLAV 395
           + R +   +  T+ GM + + V A   +
Sbjct: 357 LRRSEN-HVALTEAGMKLGNEVFAAFLL 383


>gi|224075262|ref|XP_002191317.1| PREDICTED: similar to Radical S-adenosyl methionine domain
           containing 1 [Taeniopygia guttata]
          Length = 455

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 151/389 (38%), Positives = 225/389 (57%), Gaps = 19/389 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C+K+C YC FN++V    V +       + E Q + +L+   S++S+FFGGG
Sbjct: 46  SLYVHWPYCLKRCSYCRFNTYVVPA-VDEAAVRACLVREAQALLRLSQVHSVTSVFFGGG 104

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A    +    E+T+EANPSS   +   G+R AGVNRIS+GVQ+
Sbjct: 105 TPSLASPSTVAAVLEAVAGAAHLPPAAEVTLEANPSSTSASRLAGFRAAGVNRISIGVQA 164

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H A+EA  A+  AR +FP R S DL++ LP Q+   W   L+ AL   
Sbjct: 165 LDDAELRLLGREHTAAEARKAVEAARELFPGRTSIDLLFGLPGQSRDAWAQRLEAALGLC 224

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQLT+E+GT      + G L  P +++  D+Y   +S+  A G   YE+SN + 
Sbjct: 225 DDHISLYQLTLERGTALAAQVRSGALPAPPQDLLADMYQTARSVLVASGFRHYEVSNFAR 284

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HNL+YW+   YIG+GPGAH R     + G  R A      P +W++ V+  GH 
Sbjct: 285 KGALSTHNLSYWQGDQYIGVGPGAHGRFVPRAEGGCSREARVQTLEPVAWMREVQSQGHG 344

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDW---------EMLAGRNLDIECERNLQRQ 365
              +  LS  +Q +E L + LR  EGI+ + W         + + G+  +    R LQ++
Sbjct: 345 TRSRVVLSPLEQLEELLSLALRTDEGITHERWGHFSPQLSLQAVFGQPGE---ARALQQE 401

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G++  +    LRCT  G+ +LDS++ +L 
Sbjct: 402 GWLV-LDSGGLRCTWAGLAVLDSLLPDLL 429


>gi|317503273|ref|ZP_07961327.1| coproporphyrinogen dehydrogenase [Prevotella salivae DSM 15606]
 gi|315665611|gb|EFV05224.1| coproporphyrinogen dehydrogenase [Prevotella salivae DSM 15606]
          Length = 384

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 19/386 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------GPRSISS 73
           G+Y+H PFC  +C YC F S     +  Q+ ++     E+                 + +
Sbjct: 3   GLYIHIPFCASRCIYCGFYS--TTQQSLQQKYVDMLCHEIDLRASELFNLNTDSDNKLHT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++  + +  +L  I K W  +S   E+TIE NP  +             NR
Sbjct: 61  IYLGGGTPSMLSSEQLNQLLTYIYKVWGSLSDLKELTIECNPDDITEEFAVQLADLKFNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G Q+   + L+FL R HN  +   A+  L       +S DL++  P +T+  W+ ++
Sbjct: 121 VSMGAQTFSNERLKFLHRRHNREDIFQAVTRLRHAGIQNISIDLMFGFPNETIVDWQRDI 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+   V+H+S Y L  E+GT  + M +   +    E  ++ +YN+  +  +  G   Y
Sbjct: 181 REAIDLGVEHISAYSLMYEEGTSLFNMREHQKIKEIDEETSLSMYNILINELTNAGYEQY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G  SLHN +YW    YIG+G  AHS +      +      + + ++  +  N
Sbjct: 241 EISNFARPGFRSLHNSSYWHEIPYIGLGASAHSYLNG----IRKWNISNLKKYMDEIVCN 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI 368
                E E LS + Q ++ +   LR +EGI +   +   G        +  Q     G +
Sbjct: 297 KLP-QEIEILSKDTQYNDLITTALRTKEGIDLNKMKNKYGEEHYNYLMKEAQPHINAGKM 355

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           +  +  RL  T+ G+   D ++++L 
Sbjct: 356 KLSKH-RLFITRMGLFTSDDIMSDLI 380


>gi|167947580|ref|ZP_02534654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 278

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 115/275 (41%), Positives = 166/275 (60%), Gaps = 5/275 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  R  + +  +I + L +++   + TG R + SIF G
Sbjct: 7   PLSLYIHIPWCVRKCPYCDFNSHQVREALDEPPYIDALLADLEQDLKQTGGRPLHSIFIG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL  P +IA +L G+         +EIT+EANP ++E +NF GYR AGVNR+S+GV
Sbjct: 67  GGTPSLFSPGSIAALLAGVMARVETEPELEITLEANPGTLEADNFSGYRDAGVNRLSVGV 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS +   L+ LGR H+  +A+ A+  AR   F R++ DL++ LP QT      +L  AL 
Sbjct: 127 QSFDTARLQALGRIHDPDQAMLAVERARQAGFSRINLDLMFGLPGQTSASAAEDLSIALK 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S YQLT+E  T F++        LP + +  ++++  Q+  +  G   YEIS +
Sbjct: 187 LDPGHISYYQLTLEPNTHFHQFPP----ALPDDELIWEIHSQGQTCLAEAGYLQYEISAY 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
           +  G    HNLNYW +GDYIGIG GAH ++  G  
Sbjct: 243 ARPGERCRHNLNYWCFGDYIGIGAGAHGKLTAGGR 277


>gi|302037184|ref|YP_003797506.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Nitrospira defluvii]
 gi|300605248|emb|CBK41581.1| putative Oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Nitrospira defluvii]
          Length = 392

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 119/378 (31%), Positives = 190/378 (50%), Gaps = 20/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFG 77
           G+Y+H PFC ++C +C F   +  +    E F+ S LTE++   +  L G   + S++FG
Sbjct: 8   GLYIHVPFCHQRCHFCAFYLEI-HHARAAEEFLGSLLTELRLYGEQRLFGSEPLQSVYFG 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +A +L    + + +    EIT+EA+P SV  ++    R AG  R+S G 
Sbjct: 67  GGTPTTLSAPQLATVLSAARETFGLQDEAEITVEAHPGSVTQDSLSHLRNAGFTRVSFGA 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +S+ +  L  +GR  N    +  +  AR   F  ++ DL++ LP QT+  W   L++ + 
Sbjct: 127 ESMNQLELDRVGRPGNPMSTVQMVTAARTAGFTDLNLDLMHGLPGQTIDSWAASLRQIVE 186

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS Y LT+E+GT      + G +  P E +  ++ +L + I        YEISN+
Sbjct: 187 LAPTHLSCYALTVEEGTALQTAIRRGTVPAPDETLQNEMEDLAEDILGEADFTRYEISNY 246

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
              G  S HN  +W  GDY+G+GP A S V                ++   +R     V 
Sbjct: 247 CRPGFASRHNRLHWTGGDYLGLGPSAQSYVAG----RRFGNVSDLSAYNAFLRTGTLPVT 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKD-----WEMLAGRNLDIECERNLQRQGFIERV 371
           E E LS+   A E L+ GLRL EGI++++     +  LAG+  ++  +  L+R+G     
Sbjct: 303 ESEQLSAADDACERLVFGLRLTEGITLEETGALAFSGLAGKVDELIGDDILERRG----- 357

Query: 372 QFSRLRCTQRGMTMLDSV 389
              R+R T RG    D+V
Sbjct: 358 --ERVRLTARGRRYADTV 373


>gi|326798467|ref|YP_004316286.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
 gi|326549231|gb|ADZ77616.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
          Length = 383

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 182/380 (47%), Gaps = 12/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC + C YCDF  H       +   +++   E++          I++I+FGGG
Sbjct: 3   GIYFHIPFCKQACHYCDF--HFSTSIKYKNEMLEAMAKELRLQSSYLHTDRINTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++E   I+ +LD  ++++ +S+ VEIT+EANP  +     + +R+  +NR S+G+QS
Sbjct: 61  TPSILEASEISFLLDEASRHYDISNTVEITLEANPDDLGKTKIEAFRRTSINRFSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+++ R H A EA +AI   ++  F  ++ DLIY  P  T  +W   +Q+ +   
Sbjct: 121 FYDEDLKWMNRAHTAQEADSAIKRVQDAGFDDITADLIYGYPLLTDEKWLNNIQKLVQLH 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT+E  T    + K G      +  A   +         +    YEISN + 
Sbjct: 181 IPHISAYSLTVEPKTALAHLIKVGKYKKMDDEQAAAQFLQLIETLDGYAYEHYEISNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               + HN NYW+   Y+GIGP AHS   +       + +++  S       +     E 
Sbjct: 241 PSRYAKHNTNYWKSKPYLGIGPSAHSFNGLQRQWNINNNQQYITSI-----NHQRVPAEV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E LS   + +E++M  LR   G+ ++  E L G           +  +    I R +   
Sbjct: 296 ETLSEIDRINEYIMTSLRTMWGLDLEYLERLYGSAALGYVVSNAKQFEEDNKIYR-ERDC 354

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L+ T  G  M D + + L +
Sbjct: 355 LKLTVSGKLMADYIASELFI 374


>gi|303232086|ref|ZP_07318789.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513192|gb|EFL55231.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 392

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 110/386 (28%), Positives = 183/386 (47%), Gaps = 13/386 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---IS 72
              +G+Y+H PFC +KC YCDF ++ +  +   + ++ + + EM              + 
Sbjct: 11  QRDMGIYIHIPFCKQKCIYCDFPAY-QNLEEYYDTYLYALVQEMTMFGDAYPKSRTKLVD 69

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTP+ +    +  IL+ I   + VS + + TIE+NP  V+    +G  K G +R
Sbjct: 70  TVYLGGGTPTELSLLQLEQILNTIKTTYNVSPDCQFTIESNPGEVDRAYLKGLHKLGFSR 129

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           IS GVQ+  ++SL  L R+HN  +AI A+  A    F  ++ DLIY LP QT  +    L
Sbjct: 130 ISFGVQTFNDKSLVSLHRSHNREDAIHAVQWAFKEGFQDINIDLIYGLPNQTTDEINKNL 189

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               +  ++H+S Y L +E GT  Y +   G + LP E+    +Y++        G   Y
Sbjct: 190 DIVSTLPINHISTYGLQVEPGTRLYHLVDKGVISLPDESTEDTMYDMMMQGIQDLGFERY 249

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +   A S HNL YW+Y DY+G G GAHS           ++      + + +   
Sbjct: 250 EISNFAKDKAYSKHNLKYWQYCDYLGFGAGAHSFFDSVRRANNRNVMP----YARKIDCF 305

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFI 368
              VV++E + S++  +++  + LR + GI+  D+       L+        NL  +  I
Sbjct: 306 EFPVVDEEVIDSKRAREDYCFLSLRTKWGINTVDFANRFNIRLEDIYGSILDNLIEKNLI 365

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
            +        T  G    + V +   
Sbjct: 366 IQ-DGDLYYLTPEGAKHGNYVFSQFI 390


>gi|311748693|ref|ZP_07722478.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Algoriphagus sp. PR1]
 gi|311302818|gb|EAZ81474.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Algoriphagus sp. PR1]
          Length = 373

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 116/380 (30%), Positives = 186/380 (48%), Gaps = 13/380 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H        E+ +     E+   +       + +I+FGGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTNLKTMEDIVDMIKRELLLRKDYLLSSPVETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P+ I  IL+ I   ++     E+T+EANP  +  ++   ++  G++R+SLG+QS
Sbjct: 61  TPSLLQPKMIESILELIQNEYSCEWK-ELTLEANPDDLNPSSLASWKSLGIDRLSLGIQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+F  R H + E+I AI  AR   F + S DLIY  P +  + WE +L RA+   
Sbjct: 120 FNSDVLKFYNRAHTSEESIQAIDKARKMGFEKFSLDLIYGFPYKDHSIWEQDLSRAIQID 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y LTIE  T      K G      E+   D + + QS         YEISN + 
Sbjct: 180 PGHISSYALTIEPKTALGNWEKKGKFSPADEDFIADQFEMLQSRMEDANYIQYEISNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               ++HN NYW+   Y+G+GP AHS           S      S++K +++N    V  
Sbjct: 240 EDQYAIHNSNYWKSTPYLGVGPSAHSFDGKSRGANPRSNT----SYIKSLKENEIPTVH- 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E LS E   +E+++ GLR   GI +   +     +L  +       + ++G++   + + 
Sbjct: 295 ERLSREDNLNEYILTGLRTIWGIDLDRIKNQYQFDLRNQKSSVLNQMNQEGWL-IWKDNH 353

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           L  ++ G  + DS+   L +
Sbjct: 354 LSLSKSGKLLADSIAEALFI 373


>gi|307699746|ref|ZP_07636801.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris FB024-16]
 gi|307615049|gb|EFN94263.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris FB024-16]
          Length = 478

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 130/475 (27%), Positives = 197/475 (41%), Gaps = 98/475 (20%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQL----------- 65
           S   YVH P+C+++C YCDFN++       G   +  +   E+  + +L           
Sbjct: 2   SFSAYVHVPYCLRRCGYCDFNTYANLGLGPGVAGYADAVGREILLVARLFSGSFGSVHEA 61

Query: 66  --------------------------TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
                                      G R+I ++FFGGGTP+++ P+++  I   +   
Sbjct: 62  PAEMAPHATGATPTTRGTDPSETYEIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYALKDA 121

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           + V    EIT EANP +V+    +     G  R+S G+QS     LR L R H  +   A
Sbjct: 122 FGVCPGAEITTEANPDTVDAGYLEELAAGGFTRVSFGMQSAVSGVLRVLDRTHTQANLEA 181

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           A+  A+++    S DLIY  P ++M  W   L+ AL+  V H+S Y L+IE  T   +  
Sbjct: 182 AVRAAQSLGLECSVDLIYGTPGESMADWRESLEAALALGVSHVSCYALSIEPATALGREL 241

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
           + G +     +   + Y +   + SA GL  YEISN +  G E  HNL YWR  DY G G
Sbjct: 242 RRGRISPVDPDDQAEKYEIADRVLSAAGLQWYEISNWARPGHECRHNLAYWRNRDYYGFG 301

Query: 280 PGAHSRVK---VGSHRV-----------------------------AISIEKHPESWLKM 307
           PGAHS ++    G  RV                                  KHP  W   
Sbjct: 302 PGAHSHLRGEHWGRGRVPAGDFPGEGGQDCGHDRGLAEGFPPAGSRRFWNLKHPARWAAA 361

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---------------- 351
           V      + + E ++ E    E L++GLRLREG+ ++++    G                
Sbjct: 362 VDAGRLPIEDGETVTGESLELEDLLLGLRLREGLDLREYARKYGSRGINDVKDIHKTTDS 421

Query: 352 ---------RNLDIECE---RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                       + +     R L  +G +E  +  R   T+RG  + D+VI  LA
Sbjct: 422 GDFRMAPHESEFETKLLTETRKLVAEGLVEAEKLPRAVLTRRGRLLADTVIQRLA 476


>gi|288927608|ref|ZP_06421455.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330442|gb|EFC69026.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 317 str. F0108]
          Length = 384

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 116/389 (29%), Positives = 203/389 (52%), Gaps = 23/389 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-------SIS 72
           G+Y+H PFC  +C YC F +        Q+  +Q+  +E+   R     +       +I 
Sbjct: 3   GIYIHVPFCASRCIYCAFYTTTT--LSSQDRLVQALCSELAMRRDYLLDKAFPSSAITID 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKN------WTVSSNVEITIEANPSSVEVNNFQGYR 126
           +I+ GGGTPS +  QN+  + D I         + +S NVE+TIE NP  +     Q   
Sbjct: 61  TIYLGGGTPSQLSEQNLQRLFDTIYNKEQQLPAFHISPNVEVTIECNPDDITPQFAQTIS 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMT 185
           +  VNRIS+GVQ+  ++ L FL R H A++   AI   R +    +S DLI+  PKQT+ 
Sbjct: 121 RLPVNRISMGVQTFSDERLTFLRRRHKATDIAPAIERLRQVGINNISIDLIFGFPKQTLD 180

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +W ++LQ A+   V+H+S Y L  E+GT  +++ +   +    +N+++D++NL      A
Sbjct: 181 EWAIDLQNAIELGVEHISAYSLMYEEGTPLFRLLQQQRVSEIDDNLSLDMFNLLVDTLVA 240

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           +    YEISN +  G  S HN +YW+   Y+G+GP AHS           ++ K+ ++  
Sbjct: 241 NNYEHYEISNFAREGFRSRHNASYWQAIPYLGLGPSAHSYDGNSRQWNVSNLRKYMDAI- 299

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
               +NG   +E+E L+ + + ++++   LR +EG+ +        + L    E +L +Q
Sbjct: 300 ----ENGILPMEREVLNEDTKYNDWITTALRTKEGLDLNRLSNAHRQYLLEAAEHHL-KQ 354

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G +  +  + +  ++ G+ + DSV+++L 
Sbjct: 355 GHLV-LSGNNIALSRTGIFISDSVMSDLV 382


>gi|255744298|ref|ZP_05418251.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholera CIRS 101]
 gi|255738238|gb|EET93630.1| radical SAM family enzyme similar to coproporphyrinogen III oxidase
           oxygen-independent [Vibrio cholera CIRS 101]
          Length = 351

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 119/325 (36%), Positives = 168/325 (51%), Gaps = 10/325 (3%)

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSLI  + IA +L G+A+       +EIT+EANP ++E   F GYR AGV RIS+
Sbjct: 28  LGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRISI 87

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           GVQS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A
Sbjct: 88  GVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQA 147

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS
Sbjct: 148 IALNPPHLSWYQLTIEPNTLFYSKPP----KLPDEDALWDIFELGHQKLSDAGYVQYEIS 203

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGH 313
            +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     
Sbjct: 204 GYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAK 263

Query: 314 AVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
           A ++ E L + + +  EF M   RL E     D+    G  +D+          +G++  
Sbjct: 264 AYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEGYLSE 323

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                 + T++G   L+ ++     
Sbjct: 324 -DDQHWQITEKGKLFLNDLLEAFMA 347


>gi|21325063|dbj|BAB99685.1| Coproporphyrinogen III oxidase and related FeS oxidoreductases
           [Corynebacterium glutamicum ATCC 13032]
          Length = 330

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 108/335 (32%), Positives = 157/335 (46%), Gaps = 10/335 (2%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           M  L  PR   +IF GGGTPSLI    +A +L  +   + ++   E+T E+NP S     
Sbjct: 1   MASLDNPRQAETIFIGGGTPSLIGADGLARVLGAVRNTFGIADGAEVTTESNPESTSPEF 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
           F G R+AG NRISLG+QS     L+ L R H     +AA   AR   F  ++ D+IY  P
Sbjct: 61  FDGLREAGYNRISLGMQSASSSVLKVLDRTHTPGRPVAAAKEAREAGFEHVNLDMIYGTP 120

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T       L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D + L  
Sbjct: 121 TETDDDVRKTLDAVLEANVDHVSAYSLIVEDGTAMARKVRKGELPAPDEDVYADRFELID 180

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +   + G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS +            KH
Sbjct: 181 ARLRSAGFDWYEVSNWAKPGGECKHNMGYWVDGDWWGAGPGAHSHIGDRRFYNI----KH 236

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +   +      + E E L++E    E +M+GLRL++G+ +  +              
Sbjct: 237 PARYSAQIAAGELPIKETERLTAEDHHTERVMLGLRLKQGVPLNLFA-----PAARPVID 291

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                G +       L  T  G  + D +IA++ +
Sbjct: 292 RHIAGGLLHVNALGNLAVTDAGRLLADGIIADILL 326


>gi|110636590|ref|YP_676797.1| coproporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279271|gb|ABG57457.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 373

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 11/378 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H P+C K C YC+F  H        +  + S  TE+   +     R I +++FGGG
Sbjct: 3   GLYIHVPYCHKACHYCNF--HFSTSLKDMDKMVDSICTELLLRKDYLDQRLIETVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++   N++ I   I  +++++S+ EIT+EANP  +   +   ++  GVNR+S+G+QS
Sbjct: 61  TPSILSSDNLSKIFHAIHDHYSIASSAEITLEANPEDITETSLLCWKSLGVNRLSIGIQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L ++ RNH++  +I  + LA+ N F  +S DLIY LP  T  QW  E+Q A+S  
Sbjct: 121 FQNEYLHWMNRNHSSEASIKCVTLAQKNGFENISIDLIYGLPTLTADQWRAEIQTAISLN 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+E+ T+F  + K G L    + ++ +   +      A G   YEISN   
Sbjct: 181 VPHISSYCLTVEEKTVFGNLAKKGALQPIPDEISEEHLIILIHELLAAGYEQYEISNFCK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN +YW+   YIGIGPGAHS     +HR   +   +   ++K + KN       
Sbjct: 241 PAFESKHNSSYWQRKPYIGIGPGAHSY----NHRERAANISNNSLYIKQIEKNE-WTGSI 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRL 376
           E LS   Q +E+++  LR + GI++ + E  +  +++  I+       +GF+       L
Sbjct: 296 EILSDIDQYNEYILTRLRTKWGITLIEIEAFSLPDIEKTIKLLTQFVNEGFLYIKDDIYL 355

Query: 377 RCTQRGMTMLDSVIANLA 394
             T +G  + D +   L 
Sbjct: 356 -LTTKGKLLADEITLQLM 372


>gi|301620523|ref|XP_002939612.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 438

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 145/380 (38%), Positives = 213/380 (56%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R    +       + E + + +L+    I+S+FFGGG
Sbjct: 40  ALYVHWPYCEKRCTYCNFNKYIPRSDN-EAAIRSCLVQEARTLIRLSQVHRITSVFFGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL     IA +L+ +++   +  + EIT+EANP+S E +  Q ++KAGVNR+S+GVQS
Sbjct: 99  TPSLASHGTIAAVLEAVSQTALLPQDAEITLEANPTSAERSRLQQFQKAGVNRLSVGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++Q L  LGR H+ SEA   +  A N+FP R S D+I+ LP Q++  W   L++ L   
Sbjct: 159 LDDQELLLLGRTHSTSEAQKTLEEACNLFPGRTSVDIIFGLPGQSLASWHRTLRQLLDIC 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQLT+E+GT  +KM +DG L  P   VA  +Y   +   S  G   YE+SN + 
Sbjct: 219 DDHVSLYQLTLERGTSLFKMVQDGRLSTPDMEVASQMYEDARRTLSESGFRQYEVSNFAR 278

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN++YW    YIGIGPGAHSR       G  R A      PE W+K V   GH 
Sbjct: 279 NGALSAHNMSYWLGKQYIGIGPGAHSRFVPRGSGGQQRQARIQTLEPEPWMKEVMHYGHG 338

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             +   L+      E L+ GLR   GI+ + W+ +          G + +I     L++ 
Sbjct: 339 TRKVTELNDLDVLSETLVQGLRTDIGITHERWQQIVPSLSLYHVFGASQEIG---ELRQA 395

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G +   +   LRC+ +G+ +
Sbjct: 396 GLLVLDERG-LRCSWKGLAV 414


>gi|269976834|ref|ZP_06183809.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris 28-1]
 gi|269935031|gb|EEZ91590.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mobiluncus mulieris 28-1]
          Length = 514

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 124/492 (25%), Positives = 191/492 (38%), Gaps = 111/492 (22%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQL------- 65
           + + S   YVH P+C+++C YCDFN++       G   +  +   E+  + +L       
Sbjct: 21  EPAVSFSAYVHVPYCLRRCGYCDFNTYANLGLGPGVAGYADAVGREISLVARLFSGSFGS 80

Query: 66  ------------------------------TGPRSISSIFFGGGTPSLIEPQNIALILDG 95
                                          G R+I ++FFGGGTP+++ P+++  I   
Sbjct: 81  VHEAPAEMAPPAAGATPTTRGTDPSETSEIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYA 140

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
           +   + V    EIT EANP +V+    +     G  R+S G+QS     LR L R H  +
Sbjct: 141 LKDAFGVCPGAEITTEANPDTVDAGYLEELAVGGFTRVSFGMQSAVSGVLRVLDRTHTQA 200

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
              AA+  A+++    S DLIY  P ++M  W   L+ AL+  V H+S Y L+IE  T  
Sbjct: 201 NLEAAVRAAQSLGLECSVDLIYGTPGESMADWRESLEAALALGVSHVSCYALSIEPATAL 260

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
            +  + G +     +   + Y +   + SA GL  YEISN +  G E  HNL YWR  DY
Sbjct: 261 GRELRRGRISPVDPDDQAEKYEIADRVLSAAGLQWYEISNWARPGHECRHNLAYWRNRDY 320

Query: 276 IGIGPGAHSRVK---VGSHRV-----------------------------AISIEKHPES 303
            G GPGAHS ++    G  RV                                  KHP  
Sbjct: 321 YGFGPGAHSHLRGEHWGRGRVPAGDFPGEGGQDCGHDRGLAEGFPPTGSRRFWNLKHPAR 380

Query: 304 WLKMVRKNGHAVVEKEFLSSE--------------------QQADEF---LMMGLRLREG 340
           W   V      + + E ++ E                    + A ++   +    R    
Sbjct: 381 WAAAVDAGRLPIEDGETVTGESLELEELLLGLRLRDGLDLREYARKYGSGIAADTRKVHR 440

Query: 341 ISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS---------------RLRCTQRG 382
            +  +   LA    + +     QR   +G +E                    R   T+RG
Sbjct: 441 SAASEGSRLAPHEFETKLLAEAQRLAAEGLLEAEPLGYDSGGSLGEDPHEDPRAVLTRRG 500

Query: 383 MTMLDSVIANLA 394
             + D+VI  LA
Sbjct: 501 RLLADTVIQRLA 512


>gi|304389946|ref|ZP_07371903.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326839|gb|EFL94080.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 475

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 121/474 (25%), Positives = 188/474 (39%), Gaps = 98/474 (20%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQ--------- 64
              +L  YVH P+C+++C YCDFN++       G   +  + L E+              
Sbjct: 3   SPRTLSAYVHVPYCLRRCGYCDFNTYSNLSLGPGVGGYAAALLREIGLYAPDCSVSVAVC 62

Query: 65  --------------------------------LTGPRSISSIFFGGGTPSLIEPQNIALI 92
                                               R+++S+FFGGGTP+++   ++  +
Sbjct: 63  PDGGHKGGGHEGGAGGAGASAGRQDGSHKGGGRQDSRALTSVFFGGGTPTVLPATDLVRV 122

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           L G+++ + +    EIT EANP +V     +     G  R+S G+QS     L  L R H
Sbjct: 123 LRGLSETFGLVPGAEITTEANPDTVTPQYLEALAAGGFTRVSFGMQSAVPAVLATLNRTH 182

Query: 153 NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKG 212
                +A +  A +    +S DLIY  P +++  W   L  AL    DH+S Y L IE G
Sbjct: 183 QQKHLVAGVQAAHSRGLEVSVDLIYGTPGESLADWRASLDAALELGADHVSCYALVIEPG 242

Query: 213 TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRY 272
           T   +    GD+     +   D Y L     SA GL  YEISN +  G E  HNL YWR 
Sbjct: 243 TALGRALAQGDIPPVDPDDQADKYELADETLSAAGLQWYEISNWARPGHECRHNLAYWRD 302

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
            D+ G GPGAHS +            +HP  W++ ++     V  +E ++ E    E L+
Sbjct: 303 QDWYGFGPGAHSHLGSTRFWNL----RHPAKWMQSLQAGYRPVDGREIVTGESARLERLL 358

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIE--------------------- 369
           + LRLR+G+ + ++    G +          L ++G ++                     
Sbjct: 359 LNLRLRQGLDLGEYAGEFGVDQAALLSEAHELAQEGLLDGALLPEDATSGDRELAQKDGS 418

Query: 370 -------RVQF----------------------SRLRCTQRGMTMLDSVIANLA 394
                  +V                         R   T+RG  + D+VI  LA
Sbjct: 419 LSVGLCSQVDGLSHQDGLLHQDGSATDSLTSNTGRAVLTRRGRLLADTVIQRLA 472


>gi|25246556|gb|AAN72321.1| coproporphyrinogen III oxidase [Corynebacterium glutamicum]
          Length = 330

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 108/335 (32%), Positives = 157/335 (46%), Gaps = 10/335 (2%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           M  L  PR   +IF GGGTPSLI    +A +L  +   + ++   E+T E+NP S     
Sbjct: 1   MASLDNPRQAETIFIGGGTPSLIGADGLARVLGAVRNTFGIADGAEVTTESNPESTSPEF 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
           F G R+AG NRISLG+QS     L+ L R H     +AA   AR   F  ++ D+IY  P
Sbjct: 61  FDGLREAGYNRISLGMQSASSSVLKVLDRTHTPGRPVAAAKEARRAGFEHVNLDMIYGTP 120

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T       L   L   VDH+S Y L +E GT   +  + G+L  P E+V  D + L  
Sbjct: 121 TETDDDVRKTLDAVLEANVDHVSAYSLIVEDGTAMARKVRKGELPAPDEDVYADRFELID 180

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +   + G   YE+SN +  G E  HN+ YW  GD+ G GPGAHS +            KH
Sbjct: 181 ARLRSAGFDWYEVSNWAKPGGECKHNMGYWVDGDWWGAGPGAHSHIGDRRFYNI----KH 236

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +   +      + E E L++E    E +M+GLRL++G+ +  +              
Sbjct: 237 PARYSAQIAAGELPIKETEMLTAEDHHTERVMLGLRLKQGVPLNLFT-----PAARPVID 291

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                G +       L  T  G  + D +IA++ +
Sbjct: 292 RHIAGGLLHVNALGNLAVTDAGRLLADGIIADILL 326


>gi|313207123|ref|YP_004046300.1| oxygen-independent coproporphyrinogen iii oxidase [Riemerella
           anatipestifer DSM 15868]
 gi|312446439|gb|ADQ82794.1| oxygen-independent coproporphyrinogen III oxidase [Riemerella
           anatipestifer DSM 15868]
          Length = 373

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 110/378 (29%), Positives = 197/378 (52%), Gaps = 10/378 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC+F  H       +++ + +   E+   +     +S+ S++FGGGT
Sbjct: 2   IYLHIPFCKQKCSYCNF--HFSTSLKLKDDILLALKKELYLRQHELENKSLPSLYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++    I  ++D + + +T +S++EIT+EANP  +  +  +      +NR+S+G QS 
Sbjct: 60  PSILSVDEIQRLIDEVLRYFTFNSDIEITLEANPDDLNQSFLKALSNTPINRLSIGTQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ + R H+ASEA ++I  A++  F  +S DLIY  P    + W+  LQ+++   V
Sbjct: 120 FEEDLKLMNRAHSASEAESSIKRAQDTGFENISIDLIYGSPTSNHSLWKESLQKSIELQV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LT+E  T   K  +   +  P E      +        ++G   YEISN S  
Sbjct: 180 PHISSYALTVEPKTALQKWIEQEKINAPKEEEQFIAFQYLSETLKSNGFEHYEISNFSKP 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HN  YW+   Y+GIGP AHS    G  + + +I  +   ++K + +N     E E
Sbjct: 240 NYHSRHNTAYWKGLPYLGIGPSAHSY--DGQKQRSWNIANN-SLYIKSLVENSLP-KETE 295

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI--ERVQFSRLR 377
            LS ++Q +E +M+GLR + G+            +    +++L+ +  +   +++ +++ 
Sbjct: 296 ILSEKEQFNELIMIGLRTKWGVKYNIINQ-FSEKILKPFQKSLETKLSLGTLKLEENQIF 354

Query: 378 CTQRGMTMLDSVIANLAV 395
             +    M D +I++L V
Sbjct: 355 IPEEHWFMADGIISDLFV 372


>gi|78186110|ref|YP_374153.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium luteolum DSM 273]
 gi|78166012|gb|ABB23110.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium luteolum DSM 273]
          Length = 371

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 118/378 (31%), Positives = 182/378 (48%), Gaps = 11/378 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K+CPYCDF  ++       E+F  +   E      L   +SI +I FGG
Sbjct: 2   LSLYVHIPFCRKRCPYCDF--YLVSGTGLLESFFLALEKETAAKADLFKAQSIGAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL   + +   L+ +A   +    +EI +EANP   +        +AGV RISLGVQ
Sbjct: 60  GTPSLAPARLLGRWLEQVAGLASFEEGIEIALEANPE--DAAALPELSQAGVTRISLGVQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S     LR LGR H+  E   A+  A  +F  +S DLI  +P + +  W+ +L  A+S +
Sbjct: 118 SFSASKLRALGRAHSPVEGAEAVRAASALFGSLSVDLICGVPGEDLPAWQSDLSTAISLS 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L++E  T+ ++  + G + +P + +  D Y   Q++  A G   YEISN + 
Sbjct: 178 PHHVSVYMLSVEPKTIMHRDVQAGSVSVPGDALQADCYRHAQNVLPAAGFVQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +S +NL  W    YIG GP AHS ++  S  V ++       +L    + G A   +
Sbjct: 238 PSHQSRYNLASWERQPYIGFGPSAHSFIRSPSGEVRMANTPSLSDYL---LRPGSAEGFR 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE--MLAGRNLDIECERNLQRQGFIERVQFSRL 376
           E L   ++  E + + LR+  G+ V         G  L  E       +G++ R +  +L
Sbjct: 295 EELGGRERFIEEVFLTLRINRGLDVGFLRKAHKLGHRLS-EAVAQFNAKGWM-REEGGKL 352

Query: 377 RCTQRGMTMLDSVIANLA 394
             T  G    D +     
Sbjct: 353 YLTDEGFLFADLMAEEFI 370


>gi|290969184|ref|ZP_06560709.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290780690|gb|EFD93293.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 372

 Score =  302 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 14/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G+Y+H PFC  KC YCDF S+        E ++++   E+      TG     +++FGG
Sbjct: 2   IGIYIHIPFCTGKCRYCDFPSY-SGVSSYYEAYVEAVCRELSAY---TGDTRADTVYFGG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++    +  +L  + + ++++   EIT EANP S+     + +   G+NR+SLGVQ
Sbjct: 58  GTPSVLPTALLEKLLHTVQQVFSLAPATEITAEANPESLRREQCEKWAALGINRVSLGVQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  +  L+ LGR H A++A  A+   A      +S DL+Y LP QT+  ++ ++Q     
Sbjct: 118 TFHDALLQSLGRLHTAAQAYEALQAVAAAGITNISLDLMYGLPGQTLQAFKEDIQTLSRL 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S+Y+LT+E+ T  +   + G   + +      +           G   YEIS ++
Sbjct: 178 PVTHVSIYRLTVEEHTPLWHSVQAGKERVANAAEVEAMQQYLYGTMRQMGFEHYEISAYA 237

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + HN  YWRY  YIG G  AHS           S+      +++    +G  + E
Sbjct: 238 KPGYRARHNCKYWRYEPYIGFGAAAHSFDGQTRRCNVRSLP----QYIRSCTTSGR-IQE 292

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFS 374
           +  +++ +  +++  + LR+R+GI   D+      +   +    ER L  QG ++R +  
Sbjct: 293 ETRIAAARAMEDYCFLALRMRDGIDYDDFFQRFQVSFGSQFGRTERRLYEQGLLQRTEKG 352

Query: 375 RLRCTQRGMTMLDSVIANLA 394
               T  G+   + V +   
Sbjct: 353 C-ALTPLGLAYGNYVFSRFL 371


>gi|302560709|ref|ZP_07313051.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           griseoflavus Tu4000]
 gi|302478327|gb|EFL41420.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           griseoflavus Tu4000]
          Length = 349

 Score =  302 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 161/314 (51%), Gaps = 15/314 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-------QENFIQSFLTEMQ 60
            + + G     LG Y+H P+C  +C YCDFN++      G       ++N+ ++ + E++
Sbjct: 22  ASALAGAADRPLGFYLHVPYCATRCGYCDFNTYTATELRGSGGVLASRDNYAETLIDEVR 81

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             R++ G  PR + ++F GGGTP+L+   ++  +L  I + + ++++ E+T EANP SV+
Sbjct: 82  LARKVLGDDPREVRTVFVGGGTPTLLAADDLVRMLGAIREEFGLAADAEVTTEANPESVD 141

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  R  G NRIS G+QS  +  L+ L R H      A +  AR   F  ++ DLIY
Sbjct: 142 PAYLAALRAGGFNRISFGMQSARQHVLKVLDRTHTPGRPEACVAEARAEGFAHVNLDLIY 201

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   W   L  A+    DH+S Y L +E+GT   +  + G++ +  ++V  D Y 
Sbjct: 202 GTPGESDDDWRASLDAAIGAGPDHVSAYALIVEEGTQLARRIRRGEVPMTDDDVHADRYL 261

Query: 238 LTQSITSAHGLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + + + S  G   YE+SN +       LHN  YWR  D+ G GPGAHS V      V   
Sbjct: 262 IAEEMLSGAGFDWYEVSNWATSEAGRCLHNELYWRGADWWGAGPGAHSHVGG----VRWW 317

Query: 297 IEKHPESWLKMVRK 310
             KHP ++   + +
Sbjct: 318 NVKHPGAYAAALAE 331


>gi|325478621|gb|EGC81733.1| putative coproporphyrinogen dehydrogenase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 372

 Score =  302 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 121/381 (31%), Positives = 196/381 (51%), Gaps = 13/381 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G Y+H PFC KKC YCDF +     +   + +I + + E+Q  R+     +I SI+ 
Sbjct: 2   EKVGCYIHIPFCEKKCYYCDFAAF-SNLEGWIDGYIDNLIKEIQMYRKNM-DLAIDSIYI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I+ + I  I++ I K  T     E TIE NP+S+     + Y+K GV RISLG
Sbjct: 60  GGGTPSYIDDKYIIKIVEEIKKFPT--DIKEFTIECNPNSINRKKLENYKKLGVTRISLG 117

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS +++ L+ +GRNHN+  A+  I L +     +SFDL+  LP Q     + +L+    
Sbjct: 118 VQSFDDKVLKNIGRNHNSQIAVNDILLIKEFGFDLSFDLMLNLPGQDFNSVKNDLEMVKK 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+S Y L ++KG+LFY + + G L L   +  VD+ +         GL  YEISN 
Sbjct: 178 LEPDHISWYSLILDKGSLFYNLDQKGKLKLMDTDFEVDISSFIVDELEKLGLSRYEISNF 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    ES+HN  YW    Y+  G  A   +    +    +  K    + K+++   + + 
Sbjct: 238 SRKNKESIHNKKYWNIDGYVSFGLAAAGFLSNTRYTNVRNFVK----YDKLIKSGKYPIA 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
           E EF+SS ++  E+++  LR  EGI+++ +    G +   + ++++ +   Q F E    
Sbjct: 294 ESEFISSNEREKEYIIFKLRETEGINLEIFREKFGCDFLDKYQKSIDKFKDQDFFEI--N 351

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           S    T++GM + +     + 
Sbjct: 352 SHFSFTKKGMILSNEFFVEII 372


>gi|225016711|ref|ZP_03705903.1| hypothetical protein CLOSTMETH_00621 [Clostridium methylpentosum
           DSM 5476]
 gi|224950515|gb|EEG31724.1| hypothetical protein CLOSTMETH_00621 [Clostridium methylpentosum
           DSM 5476]
          Length = 369

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 124/378 (32%), Positives = 198/378 (52%), Gaps = 19/378 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH PFC  KCPYCDF S     ++ +E ++++ L E++      G R+  +++FGG
Sbjct: 2   LGIYVHIPFCNGKCPYCDFYSLAGDEEI-KERYVEAVLRELE-EAHRDGMRA-DTLYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L+ PQ +  I     + + +  N EIT EANP+SV  N     R++G+NRIS GVQ
Sbjct: 59  GTPTLLSPQQLGRITTQARRLYEL-QNAEITTEANPNSVTFNQLDSLRQSGINRISFGVQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ LGR H A++A  AI LA+   F  +S DL+  +P QT       L      
Sbjct: 118 SAVDAELKLLGRRHTAAQAEQAITLAKQAGFDNISCDLMLGIPNQTAQSLAQSLDWINRQ 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IE  T ++    +   + PS++   DLY  T    +  G   YEISN S
Sbjct: 178 NIQHVSAYLLKIEPSTPYFG--SEVLKLCPSDDTCADLYLQTVRSLTQMGFEQYEISNFS 235

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR-KNGHAVV 316
             G ES HNL YW+  +Y+G+G  AHS +    +  +  +E++    L+ V+  + +A  
Sbjct: 236 IPGLESRHNLKYWQCEEYLGVGAAAHSFLNGRRYGHSRKLERYLALGLQDVQFTDENAGG 295

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
                      +E LM+GLRL  G+++   + L      ++     +  G +  V  +R+
Sbjct: 296 ----------MEERLMLGLRLNRGMALDSLKGLHNPKGFLDRVDAYKALGLLT-VSGNRI 344

Query: 377 RCTQRGMTMLDSVIANLA 394
             T  G  + ++++++L 
Sbjct: 345 ALTPEGFLLSNTILSDLI 362


>gi|306818046|ref|ZP_07451777.1| coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC 35239]
 gi|304649010|gb|EFM46304.1| coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC 35239]
          Length = 514

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 122/492 (24%), Positives = 190/492 (38%), Gaps = 111/492 (22%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQL------- 65
           + + S   YVH P+C+++C YCDFN++       G   +  +   E+  + +L       
Sbjct: 21  EPAVSFSAYVHVPYCLRRCGYCDFNTYANLGLGPGVAGYADAVGREILLVARLFSGSFGS 80

Query: 66  ------------------------------TGPRSISSIFFGGGTPSLIEPQNIALILDG 95
                                          G R+I ++FFGGGTP+++ P+++  I   
Sbjct: 81  VHEAPAGMAPHAAGATPTTRGTDPSETYEIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYA 140

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
           +   + V    E+T EANP +V+    +     G  R+S G+QS     LR L R H  +
Sbjct: 141 LKDAFGVCPGAEVTTEANPDTVDAGYLEELAAGGFTRVSFGMQSAVSGVLRVLDRTHTQA 200

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
              AA+  A+++    S DLIY  P ++M  W   L+ AL+  V H+S Y L+IE  T  
Sbjct: 201 NLEAAVRAAQSLGLECSVDLIYGTPGESMADWRESLEAALALGVSHVSCYALSIEPATAL 260

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
            +  + G +     +   + Y +   + SA GL  YEISN +  G E  HNL YWR  DY
Sbjct: 261 GRELRRGRISPVDPDDQAEKYEIADRVLSAAGLQWYEISNWARPGHECRHNLAYWRNRDY 320

Query: 276 IGIGPGAHSRVK---VGSHRV-----------------------------AISIEKHPES 303
            G GPGAHS ++    G   V                                  KHP  
Sbjct: 321 YGFGPGAHSHLRGEHWGRGWVPAGDFPGEGGQDCGHDRGLAEDFPPTGSRRFWNLKHPAR 380

Query: 304 WLKMVRKNGHAVVEKEFLSSE--------------------QQADEF---LMMGLRLREG 340
           W   V      + + E ++ E                    + A ++   +    R    
Sbjct: 381 WAAAVDAGRLPIEDGETVTGESLELEELLLGLRLRDGLDLREYARKYGSGIAADTRKVHR 440

Query: 341 ISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS---------------RLRCTQRG 382
            +  +   LA    + +     QR   +G +E                    R   T+RG
Sbjct: 441 SAASEGSRLAPHEFETKLLAEAQRLAAEGLLEAEPLGYDSGGSLGEDPHEDPRAVLTRRG 500

Query: 383 MTMLDSVIANLA 394
             + D+VI  LA
Sbjct: 501 RLLADTVIQRLA 512


>gi|238060566|ref|ZP_04605275.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
 gi|237882377|gb|EEP71205.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
          Length = 477

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 114/325 (35%), Positives = 165/325 (50%), Gaps = 12/325 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQ 64
                  G+   GVYVH PFC  +C YCDFN++      G   +E +    L E+    +
Sbjct: 21  ATATRAVGARGFGVYVHVPFCASRCGYCDFNTYTADELGGGASREAYADQVLAELALAGR 80

Query: 65  LTG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           + G   P  + ++F GGGTP+L+   ++A ILDGI + W ++++ E+T EANP SV   +
Sbjct: 81  VLGDAPPPRVDTVFVGGGTPTLLPADDLARILDGIDRTWGLAADAEVTTEANPESVTPES 140

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            +  R AG  RISLG+QS     L  L R H A  A  A   AR+  F  ++ DLIY  P
Sbjct: 141 LKSLRAAGYTRISLGMQSAAPGVLAILDRRHRAGRATEAAREARDAGFDHVNLDLIYGTP 200

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +    +   L + +S  VDH+S Y L +E GT      + G+L  PS++VA D Y   +
Sbjct: 201 GENAEDFAASLAQVVSAGVDHVSAYALIVEDGTRLAARMRRGELPYPSDDVAADRYLAAE 260

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +     G   YE+SN +   G +  HNL YW  G + G+GPGAHS V      V     K
Sbjct: 261 AALGEAGFSWYEVSNWARTPGGQCRHNLLYWTGGHWWGLGPGAHSHVGG----VRWWNVK 316

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSE 324
           HP ++ K +       + +E L+  
Sbjct: 317 HPSAYAKRLAAAQSPGLAREVLTPR 341


>gi|254443497|ref|ZP_05056973.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verrucomicrobiae bacterium DG1235]
 gi|198257805|gb|EDY82113.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verrucomicrobiae bacterium DG1235]
          Length = 388

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 12/381 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              LG+Y+H PFC   C +C F   ++  + G  ++I     E++ +    G R + ++F
Sbjct: 14  DGPLGLYLHVPFCSTSCDFCGFY-QIQSDRKGILSYIDGVKRELELVDA--GNRKLDTMF 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP L+   ++  +   I          E T+E  PSSV+ +  +  ++AGV RIS+
Sbjct: 71  WGGGTPGLLPAGDMLKVAGAITDALG-KPRQEWTVEMAPSSVKRDKLEALKEAGVTRISM 129

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+QSL E+ L  LGR H+  + + A  + R+  F  ++ DLI+A+P Q+  +W  +++ A
Sbjct: 130 GIQSLNERLLDALGRQHSLKQIMNAYEMIRDVGFRSVNVDLIFAIPTQSEEEWRADVRGA 189

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   DHLS Y LT E+ T  +   + G + +   +     Y +     +A G   YEIS
Sbjct: 190 LALEPDHLSTYCLTFEEDTALFIKLQQGKVKI-DTDREARFYTVMWEEAAAGGFGQYEIS 248

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G   +HN+N WR  ++IG+GP A S+     H    +     + WL  + +    
Sbjct: 249 NYARPGHACVHNMNTWRMAEWIGVGPSAASQWGGSRH----TNTPDLKDWLAGLERGERG 304

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQF 373
           +V++  LS     ++ L+ GLR+ EG+ +   +   GR+L D    R L  +G  ER   
Sbjct: 305 LVDRVELSDGLLLEDSLIFGLRMNEGVDLAALKRRFGRDLEDFPVLRQLVSEGKAER-DG 363

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           + LR T  G  + D+V   L 
Sbjct: 364 TVLRLTSEGRMVADAVGEALL 384


>gi|238786241|ref|ZP_04630187.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia bercovieri ATCC 43970]
 gi|238712856|gb|EEQ04922.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Yersinia bercovieri ATCC 43970]
          Length = 333

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 17/345 (4%)

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           + ++     L   R IS+IF GGGTPSL+  + +  +LDG+     V+ + EIT+EANP 
Sbjct: 1   MADLDIDAPLVSGREISTIFIGGGTPSLLSAEAMQQLLDGVRARLPVAFDAEITMEANPG 60

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFD 174
           +VE + F GY++AG+NRIS+GVQS   + L  LGR H   EA  A  LA ++  R  + D
Sbjct: 61  AVEADRFSGYQRAGINRISIGVQSFSAEKLTRLGRIHGPEEAKRAAELATSLELRSFNLD 120

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L++ LP QT+ Q   +L++A++    HLS YQLTIE  T F         +LP ++   D
Sbjct: 121 LMHGLPDQTLEQALSDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP----ILPDDDALWD 176

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           ++     + SA G   YE S ++  G +  HNLNYWR+GDY+GIG GAH ++     R+ 
Sbjct: 177 IFQQGHQLLSAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFSDGRIL 236

Query: 295 ISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR- 352
            +I+ KHP  +++     G  + ++  + +  +  EF M   RL E     D+    G  
Sbjct: 237 RTIKTKHPRGFMQ-----GKYLDKRYEVETADRPFEFFMNRFRLLEAAPRADFYHFTGLA 291

Query: 353 --NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              +  + +  L ++  IE  ++   + T++G   L+S++  L +
Sbjct: 292 ESTIRPQLDEALAKEYLIETEEY--WQITEKGKLFLNSLL-ELFL 333


>gi|298530638|ref|ZP_07018040.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510012|gb|EFI33916.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 375

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 118/379 (31%), Positives = 195/379 (51%), Gaps = 12/379 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S     +     +++    E++   +    R ++SI+ GGGT
Sbjct: 3   LYIHVPFCRTKCAYCAFASQEYIQE-PAAVYLRLVQQELEVRSRQIQHRKVTSIYMGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQS 139
           P+++   ++A I+D + KN+      E T+EANP ++ E+++ Q +   G+NRISLG+QS
Sbjct: 62  PTVLPVASLARIVDAVYKNFDPVPGCEFTLEANPENILEMDDLQVFSSMGINRISLGMQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++Q L  L R H++ +AI A  + R   F  +S D I+ +P QT+  W  EL  A+  A
Sbjct: 122 LDDQLLGTLERGHDSRQAIKAARMIRQAGFALLSLDFIWGIPGQTLKGWLGELAHAVHLA 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLS Y L +E GT      + G+L +P E     +Y        + G   YEISN + 
Sbjct: 182 PDHLSCYGLGLEPGTRLTARIRAGELEMPEERAQARMYMHGAEYLESCGFLQYEISNFAR 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           +G    HNL YW    ++G GP A S +     +   +I  +     + +     + +E 
Sbjct: 242 MGYSCKHNLGYWAGEPFLGAGPSAVSTIDGTRWQNPPAIRDY-----QTLGGKNFSDLEF 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E LS  ++ +E +M+ LR   G+++ D++ L G++         + L +   I R+    
Sbjct: 297 EKLSYTRKVNELVMLSLRTSRGLNLHDYKHLTGQSFSRRYAGIIKALHQNNLI-RMAHGY 355

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T+ GM + DS++    
Sbjct: 356 LRLTRNGMLVSDSILEKFM 374


>gi|306821560|ref|ZP_07455158.1| possible coproporphyrinogen dehydrogenase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550305|gb|EFM38298.1| possible coproporphyrinogen dehydrogenase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 376

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 106/384 (27%), Positives = 198/384 (51%), Gaps = 15/384 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSI 74
             LG+Y H PFC  KC YCDF+SHV  YK     +I + + E++  ++       +I +I
Sbjct: 2   KKLGLYFHIPFCNSKCLYCDFDSHVSAYKERHS-YIDALIKEIKLAKEKYDLKKYTIDTI 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTP++++   +  +L  I  N++ S ++E +IE NP+S+     +  + + +NRIS
Sbjct: 61  FIGGGTPTVLDNDLLEKLLFEIDGNFSFSDDLEYSIEINPNSIAEEKIKILQNSRINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  E  L+ LGR+H+ ++      +  ++ F  +S DL+  +P Q +  ++  L++
Sbjct: 121 IGLQSANEVELKSLGRSHSYADFENTYSMLKKHGFDNISVDLMMGIPNQNLNSYKNTLEK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L     H+S Y L IE GT F  M++ G L+   ++  ++LY+ T     + G   YEI
Sbjct: 181 VLKLEPSHISSYMLIIEDGTPFADMYEKG-LIKVDDDFTLELYDYTIDFLKSKGYEQYEI 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +    +  HN+ YW+  +Y+G+G  A S +       +       + +++ +  N  
Sbjct: 240 SNFAKNDRKCRHNIRYWKVNEYLGLGQSAASYINRARFSNSD------KDYVQSISNNII 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIER 370
            + +    + +   +E++ + LR+ EGI + + +   G N      +  ++L+ +  I  
Sbjct: 294 PITDYALQTEKDLYEEWIFLKLRMNEGIIIDEIDEKFGMNFKENYAKVLKSLKNRNLIND 353

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            + S L  T+ G  + +S+   L 
Sbjct: 354 YKHS-LSLTREGFKISNSIFLELM 376


>gi|255530294|ref|YP_003090666.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           heparinus DSM 2366]
 gi|255343278|gb|ACU02604.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           heparinus DSM 2366]
          Length = 379

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/381 (30%), Positives = 184/381 (48%), Gaps = 15/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K C YCDF  H        +    +  TE+   +       + SI+FGGG
Sbjct: 3   GIYIHIPFCKKACTYCDF--HFSTSLKYIDEMTDAICTEIIKKQDRITG-QVGSIYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  ++   I   + +++++SS  EITIEANP  ++       R+  VNR S+G+QS
Sbjct: 60  TPSVLPARSFEKIFHTLTRHFSISSEAEITIEANPDDLDAKKITELRQLPVNRFSIGIQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L ++ R H+A EA   I  +++  F  +S DLIY  P  T  +W+  +Q+A+ + 
Sbjct: 120 FFEEDLIWMNRAHSAKEAEDCIKRSQDAGFENLSIDLIYGYPLLTDNKWQRNIQKAIEFQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y LT+E  T      K G  V  +E  +   +    +     G   YEISN S 
Sbjct: 180 TPHISAYSLTVEPRTALASAIKKGKQVPVNEEQSAAQFLTLINKLKEGGFEHYEISNFSQ 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  ++HN NYWR   Y+GIGP AH       +    +      ++L  ++    A    
Sbjct: 240 PGKYAVHNTNYWRGVPYLGIGPAAHGFDGQNRYLNIANN----AAYLSALQAGNLA-ETI 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ----RQGFIERVQFS 374
           E LS+  + +E++M  LR   G S++      G+       +++Q    +Q  I   Q  
Sbjct: 295 EELSTYDRFNEYIMTSLRTVWGTSLQKIMADFGKEFLTGTLKSIQPFIEKQWLI--NQNQ 352

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
           +L  TQ G    D + + L +
Sbjct: 353 QLILTQEGKLFADHIASELFL 373


>gi|282889589|ref|ZP_06298130.1| hypothetical protein pah_c002o031 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500512|gb|EFB42790.1| hypothetical protein pah_c002o031 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 384

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 120/383 (31%), Positives = 188/383 (49%), Gaps = 9/383 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               + +Y H PFC +KC YC F     +    Q+  ++    E + +  L     + SI
Sbjct: 4   SKKQISLYFHIPFCSQKCDYCHFYVLPDKDPFKQQ-LMEGLELEWKKILPLLSGCEVISI 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+  ++IA IL  I K   + S  EI++EANP +V     +GY  AG+NR+S
Sbjct: 63  YFGGGTPSLLGIESIAKILSWIEKEGVLHSYAEISLEANPENVNTPLMKGYANAGINRVS 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q+ +   L+ L R H +  A  A+  +A      +S DL+Y +P QT  QW   LQ+
Sbjct: 123 LGIQTFDPALLKILHRTHTSERAYQAVEEIATAGIRNISVDLMYDIPCQTFDQWVHTLQQ 182

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +   + HLS Y LTIE  T FYK  +    V+P    +  +          HGL  YEI
Sbjct: 183 VVKLPITHLSFYNLTIEPHTKFYKQQEQLKKVVPDPETSFTMLTYGIEQLELHGLKRYEI 242

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S  +     S HN+ YW    ++G+GP A S       R       H   +++ +RK+  
Sbjct: 243 SAFARDACHSRHNVGYWTARPFLGLGPSAFSYWDEERFRNIA----HLGRYVEKLRKDES 298

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERV 371
            V  +E L  E+   E L + LRL +G+++++++   G  +   +E  R L +  F+   
Sbjct: 299 PVDFREKLGYEEHLRELLAVELRLMKGVNLEEFQNRHGALIHSMLETVRALIQSEFLLE- 357

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               L  +++G    D+V A + 
Sbjct: 358 DNHVLILSEKGKNFYDTVAAEIV 380


>gi|325852044|ref|ZP_08171127.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           CRIS 18C-A]
 gi|325484600|gb|EGC87516.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           CRIS 18C-A]
          Length = 427

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 190/430 (44%), Gaps = 62/430 (14%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWM-----RQLTGPR 69
           G+Y+H PFC  +C YC F S V      + K  +E ++ +   EM+              
Sbjct: 3   GLYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETA 62

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS---------------SNVEITIEANP 114
            ++SI+ GGGTPS +  Q++  +   I   + +                + +E+T+E NP
Sbjct: 63  ELTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRKQGCAIAPIEVTMECNP 122

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSF 173
             V     +  R   VNRIS+G+Q+  ++ LRFL R H A+EA++A+  L       +S 
Sbjct: 123 DDVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGIGNISV 182

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +WE ++   L    +H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 183 DLMFGFPGETLEEWEADIAHVLELGAEHISAYSLMYEEGTPLYRLLQAGKVREMDDELYR 242

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFL-----------------------------GAESL 264
            +Y++      + G   YEISN + L                                S 
Sbjct: 243 KMYDVLIDRLGSAGYEHYEISNFARLTPTLSDESPALKVQPSNLKSQISNLKVPSPFRSR 302

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
           HN +YW    YIGIG  AHS            I     +++  +R+      E+E + ++
Sbjct: 303 HNSSYWHDVPYIGIGAAAHSYGNGKRSWNVADI----RAYIDAIRERRLP-CEEEVIDAD 357

Query: 325 QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
              ++ +M  LR REGI +        R+  +       RQG ++     RL  T++G+ 
Sbjct: 358 THYNDTVMTALRTREGIELSLLSAEY-RSYLMHLAVPFLRQGLLKE-DGGRLHLTRKGIY 415

Query: 385 MLDSVIANLA 394
           + DS+++ L 
Sbjct: 416 VSDSIMSELM 425


>gi|167754055|ref|ZP_02426182.1| hypothetical protein ALIPUT_02343 [Alistipes putredinis DSM 17216]
 gi|167658680|gb|EDS02810.1| hypothetical protein ALIPUT_02343 [Alistipes putredinis DSM 17216]
          Length = 376

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 175/379 (46%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC + C YCDF           ++ + +   E+         R I +++FGGG
Sbjct: 3   GLYFHIPFCRRICAYCDFFKSA--EVGRVDSVLDAMGRELDGAVDWLADRRIRTVYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL +P  +  + D  A     S   E T+EANP  +     +   + G NR+S+GVQS
Sbjct: 61  TPSLCDPARLQGLADRAATLLDCSGVEEFTVEANPDDMTEEWLEALARTGANRLSVGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  LR + R H  ++A+ A+  A+   F  ++ DLI+ +P       +  L++AL+  
Sbjct: 121 FDDDELRLMNRRHTGAQAVEAVRRAQAAGFANLTIDLIFGVPGFGGKVLQRNLEQALALG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+EK T F +  + G      E V+   Y       +  G   YE+SN++ 
Sbjct: 181 VQHISAYHLTVEKNTAFGRRLERGRFSEVDEQVSEREYLEVHRTLTGAGFEHYEVSNYAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HN  YW   +Y+GIGP AHS         A SI+ +             A+ E+
Sbjct: 241 PGCRARHNAAYWSGDEYLGIGPAAHSFNGKSRRWAAASIDGYLAG------AGTEAIYEQ 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSR 375
           E L+   + +E+LM  LR  EG+ +   E   G+       R  +   R G +  +   R
Sbjct: 295 ERLTERDRYNEYLMTRLRTAEGLELATVETCFGKERAERLLRQAEPFMRVGEL-CLAAGR 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L        + D+VI  L 
Sbjct: 354 LAIPAEKFLVSDAVIGALF 372


>gi|163737988|ref|ZP_02145404.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Phaeobacter gallaeciensis BS107]
 gi|161388604|gb|EDQ12957.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Phaeobacter gallaeciensis BS107]
          Length = 312

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 145/313 (46%), Positives = 198/313 (63%), Gaps = 3/313 (0%)

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + P  +A I++   + W  S+++EI++EANP+SVE   F GYR AGVNRIS+G+Q+L + 
Sbjct: 1   MHPDTVATIIETAREIWPFSNDIEISLEANPTSVEAGRFTGYRDAGVNRISMGIQALNDG 60

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L  LGR H+ SEA  A  +AR  F R+SFDLIYA   QT+  W+ EL +ALS A+DHLS
Sbjct: 61  DLHRLGRMHSVSEAQNAFDVARKCFDRVSFDLIYARQGQTLVGWQQELDQALSMAIDHLS 120

Query: 204 LYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           LYQLTIE+GT F   +  G L  LPS++ A D+Y  TQ I   HGL AYE+SNH+  GAE
Sbjct: 121 LYQLTIEEGTAFGDRYARGKLRDLPSDDNAADMYLTTQEICDKHGLPAYEVSNHARPGAE 180

Query: 263 SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLS 322
           S HNL YWRYGDY+GIGPGAH R+ +   R A      P +WL    +N      +  L+
Sbjct: 181 SRHNLIYWRYGDYLGIGPGAHGRLTLDGTRYATETYLQPGAWLAA-AENHTGECSRIPLT 239

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRG 382
            E  + E+LMMG+RL EG+ +  +  ++GR L  E   NL+  G +E     R++ T  G
Sbjct: 240 PEDASAEYLMMGMRLVEGLDLDRFRAISGRTLSSERISNLREIGMVELSDN-RIQATDAG 298

Query: 383 MTMLDSVIANLAV 395
             +L++V+ +L V
Sbjct: 299 RAVLNAVLRDLLV 311


>gi|224585814|ref|YP_002639613.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224470342|gb|ACN48172.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 485

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 177/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 67  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 126

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  ++++    
Sbjct: 127 LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIDLDVLDH 186

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 187 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 246

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 247 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 305

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +  G        E + + N+  Y      D +G+G  A S +  G  
Sbjct: 306 TQAGYQFIGMDHFARPGDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 363

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 364 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 421

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 422 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 465


>gi|227504546|ref|ZP_03934595.1| coproporphyrinogen dehydrogenase [Corynebacterium striatum ATCC
           6940]
 gi|227198866|gb|EEI78914.1| coproporphyrinogen dehydrogenase [Corynebacterium striatum ATCC
           6940]
          Length = 347

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 166/348 (47%), Gaps = 12/348 (3%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
             ++ +   E+    Q  G R   ++F GGGTPS++  Q +  IL  + + + ++   E+
Sbjct: 7   AEYLDALERELGMAAQQVG-RPAETVFIGGGTPSMLGAQGLGRILGRVKETFGLAPGAEV 65

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           T E+NP S     F+G  ++G  R+SLG+QS  +  LR L R H    A  A   AR   
Sbjct: 66  TTESNPESTSPEYFEGLLESGFTRVSLGMQSASDSVLRVLERAHTPGRAFDAAREARAAG 125

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  ++ D+IY  P +T     + L R L   VDH+S Y L +E GT   +    G L  P
Sbjct: 126 FEHVNLDMIYGTPTETDDDVRLTLDRVLETGVDHVSAYSLIVEDGTRMARKVNKGLLPAP 185

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            E+V    Y    +   A G   YE+SN +  G E  HN  YW  G++ G GPGAHS + 
Sbjct: 186 DEDVLARRYEAVSATLEAEGFEWYEVSNWAKPGGECQHNRIYWVDGNWWGAGPGAHSHLG 245

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                      K P  + +M+ +    V E+E L+  ++  E +M+GLRLREGI      
Sbjct: 246 NERFYNV----KLPRRYNEMLGRGELPVKERETLTDAERHMEKVMLGLRLREGIPAGWL- 300

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              G   +      + R G ++R    RL  T+ G  + D +I +L V
Sbjct: 301 ---GSGAEPVIADYICR-GLLQRA-GDRLCLTKPGRLLADGIITDLLV 343


>gi|260592159|ref|ZP_05857617.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella veroralis F0319]
 gi|260535793|gb|EEX18410.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella veroralis F0319]
          Length = 400

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 117/404 (28%), Positives = 194/404 (48%), Gaps = 37/404 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSISSI 74
           G+YVH PFC  +C YC F S +   +       +E ++ +   EMQ          I SI
Sbjct: 3   GLYVHVPFCASRCIYCGFYSTIPTRQKDNGLTIEEQYVNALCNEMQLRANEL-DEPIRSI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSN-----VEITIEANPSSVEVNNFQGYRKAG 129
           + GGGTPS +  +++  I   I K + ++ N     +EIT+E NP  V     +  +K  
Sbjct: 62  YLGGGTPSQLTYKSLQQIFSTIKKAFHITWNKNNSPLEITMECNPDDVTDTFVRDLQKLP 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
           +NRIS+GVQ+  ++ LRFL R H A E   AI   R I    +S DL++  P +TM +W+
Sbjct: 122 INRISMGVQTFSDERLRFLHRRHTADEVELAIKRLRKIGIHNISIDLMFGFPNETMNEWK 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++ RA+   V+HLS Y L  E+GT  Y++ K+G +    + +   +Y+L  +  +  G 
Sbjct: 182 SDIDRAIQLNVEHLSAYSLMYEEGTPLYQLLKNGKVKEMDDELYRQMYDLLINGLTQAGY 241

Query: 249 HAYEISNHSFLG------------------AESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
             YEISN + L                     SLHN +YW    YIG+G  AHS      
Sbjct: 242 EHYEISNFAKLKPQRSNFKGQTSKGRDQSPFRSLHNSSYWHNVPYIGLGAAAHSYNNSKR 301

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                 I    ++++  ++ N     E+EF+  +   ++ +M  LR REG+ +       
Sbjct: 302 SWNVADI----KAYISALKDNKRPY-EEEFIDEDTHYNDMIMTALRTREGLQLSTLSEPY 356

Query: 351 GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            ++  +   + L +Q  ++      L  T  G+ + D+++++L 
Sbjct: 357 -QDYLMRLAKPLIQQNLLKE-DDGWLHLTHNGIYVSDAIMSDLM 398


>gi|291532764|emb|CBL05877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Megamonas hypermegale ART12/1]
          Length = 314

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 179/316 (56%), Gaps = 6/316 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            G+Y+H PFC +KC YCDF S  ++  +   E +I +   E+   + L     I +I+FG
Sbjct: 3   FGIYIHIPFCKQKCFYCDFASTAKKVDETLYEQYINALCQEITMYQALFPDIYIDTIYFG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS++ P  I   L+ +  N+T++S++EIT+EANP +V+    Q   + G+NR+S GV
Sbjct: 63  GGTPSILPPDLIIRALNAVKANFTLNSDIEITLEANPGTVDEQKLQYLYQNGINRLSFGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q++++  L+ +GR H   EA  AI +A+ I F  +S DL+Y LP QT+   +  +  A++
Sbjct: 123 QAVQDDLLQKIGRIHTIKEAEMAIEMAQKIGFKNISMDLMYGLPGQTLEMLKEAVSWAVN 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+S+Y L IE+ T+F +++  G L+LPSE+ +  +Y+        +  + YEISN 
Sbjct: 183 KNMQHISIYGLQIEENTVFGRLYDQGKLILPSEDESEMMYDYLTEQLPKYNYNRYEISNF 242

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           + +G ES HNL YW+   Y+G+G GAH        +    I    + ++K   +     +
Sbjct: 243 AKIGYESRHNLAYWQDKFYLGLGAGAHGYYNQKRVQNPFDI----DEYIKKCNQKILPFI 298

Query: 317 EKEFLSSEQQADEFLM 332
            +E +  +   +EF  
Sbjct: 299 NEEIVDEKAHIEEFCF 314


>gi|304382658|ref|ZP_07365152.1| possible coproporphyrinogen dehydrogenase [Prevotella marshii DSM
           16973]
 gi|304336283|gb|EFM02525.1| possible coproporphyrinogen dehydrogenase [Prevotella marshii DSM
           16973]
          Length = 381

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 110/377 (29%), Positives = 180/377 (47%), Gaps = 11/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YC F S    +   QE ++ +   EM           + +++ GGG
Sbjct: 11  GIYIHIPFCASRCIYCAFYSST--HAEWQEAYVDALCREMSMRADYLQDAPLETVYLGGG 68

Query: 80  TPSLIEPQNIALILDGIA-KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TPS +    +  + + +  K +      EIT+E NP  V        R+  VNR+S+G Q
Sbjct: 69  TPSQLSITCLHRLFNHLYTKVYKGCCPTEITMECNPDDVTPEWVSALRELSVNRVSMGAQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ LRFL R H A+E   A+   R      ++ DL++  P +T   W  ++ RAL+ 
Sbjct: 129 TFDDRRLRFLHRRHTAAEVFRAVERLRAADINHINIDLMFGFPDETREDWTEDIDRALAL 188

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++HLS Y L  E+GT  Y + + G +    E V+  +Y       +A G   YEISN +
Sbjct: 189 NIEHLSAYCLAYEEGTPLYHLREQGRVKELDEEVSRSMYETLIDRMTAAGYEHYEISNFA 248

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  SLHN NYW    YIG+G  AHS             +++  S  +     G    E
Sbjct: 249 RPGHHSLHNANYWNATPYIGLGASAHSYDGASRQWNISDTQRYIASIAE-----GIVPAE 303

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E L ++ + ++ +   LR   GI +        RN  ++  R     G +  V+  RL 
Sbjct: 304 RETLDADTRYNDLVTTALRTARGIYLPSLCAD-RRNYLMQNARRHIENGLLA-VEADRLL 361

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G+ + D+V+++L 
Sbjct: 362 LTRQGLFVSDTVMSDLI 378


>gi|256827197|ref|YP_003151156.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
 gi|256583340|gb|ACU94474.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
          Length = 368

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/379 (30%), Positives = 186/379 (49%), Gaps = 22/379 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KC YCDF SHV  +    + ++++ +  ++   +      I +++FGGG
Sbjct: 7   ALYVHVPFCRAKCSYCDFASHVPGHNSEMDAYVEAVVLALRARGRDGLLSDIETVYFGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P  +  +L  ++ +  ++  VE TIEANP S+     +     G NR+SLGVQS
Sbjct: 67  TPTFLGPARLTQLLYALSLSMHLTDTVECTIEANPESLTRRMVRDLWALGANRLSLGVQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L  LGR H+A +A  AI  A + F  +S DLI  +P QT   +   +Q A++  V
Sbjct: 127 FDDTVLGILGRPHSADDARRAIDDAHDRFHNVSIDLICGIPGQTPGSFLSSVQEAIALGV 186

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S+Y LTIE+GT FY ++  G L    E+   D       I    G + YE+++++ +
Sbjct: 187 SHISIYPLTIEEGTPFYSLYSKGLLAAIDEDEQADAMIDASRILKQAGFYRYEVASYARM 246

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G E  HN +YW    Y+GIG GA S  +    R         + ++             E
Sbjct: 247 GYECRHNCSYWTGVPYLGIGSGAVSMEQNDEGRWRSQ-----DGYI------------LE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIECERNLQRQGFIERVQFSRLRC 378
            L   Q+  E LM+G+RL +GIS       A           +L   G +E       + 
Sbjct: 290 RLDRYQREAEDLMLGMRLTKGISDIRLNEAAKLLPQAPNTFSSLVSLGLVEHTD-GVWQS 348

Query: 379 TQRGMTMLDSV---IANLA 394
           +++G  + + +   + +LA
Sbjct: 349 SEKGWLLGNELYGALLDLA 367


>gi|188997347|ref|YP_001931598.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932414|gb|ACD67044.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 368

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 116/373 (31%), Positives = 189/373 (50%), Gaps = 15/373 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S V +    ++ ++++   E+     L     I +I+FGGG
Sbjct: 4   GIYIHIPFCNIKCPYCDFTSFVWQEDKLKDRYVEALKKELLMY--LDNDFDIQTIYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++P+ IA I++ I  N     N+EIT+E NP + E N F+  + AGVNRIS+G QS
Sbjct: 62  TPSTLKPEKIAEIIEFIKNNVKHQKNLEITVEINPKTYEYNEFKIIKDAGVNRISIGNQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++L  LGR+H   ++   I          ++ DLIY +  QT+   E +L+   S  
Sbjct: 122 FVEKNLTMLGRDHKPEDSYKTIENCLKAGISNINLDLIYGIQNQTLQDLEKDLEIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT  + T    + + G   LP E++A  ++ +            YE+SN + 
Sbjct: 182 ITHISAYMLTAYEDTPLGTLVEKGLYHLPDEDLAYQMFLMIDQALHNKSFERYELSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++GIG  A S V            K+   +L+ V K    V   
Sbjct: 242 KGYECKHNLFYWTDVNFLGIGVSAWSYVNNERFGNT----KNINEYLENVEKGIKPVKFS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  +++ +E + +GLRL+EGI V   +         +  + L  +G+   ++  R   
Sbjct: 298 EVLDEKKKHEEKIFLGLRLKEGIDVDLIKNK-------DFLKELVDEGY-GDIKDGRFYL 349

Query: 379 TQRGMTMLDSVIA 391
             +G+ +++ ++ 
Sbjct: 350 LPKGIMVINEIVR 362


>gi|281201785|gb|EFA75993.1| hypothetical protein PPL_10571 [Polysphondylium pallidum PN500]
          Length = 438

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 141/415 (33%), Positives = 221/415 (53%), Gaps = 33/415 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPR- 69
           T     +  +Y+HWP+C K CPYC FN ++    V      QSFLTE+ Q +++  G   
Sbjct: 26  TITKPRTTSIYIHWPYCSKICPYCSFNKYMDGPHVDHSAMKQSFLTELNQIVKKYYGENG 85

Query: 70  ----SISSIFFGGGTPSLIEPQNIALI--------------LDGIAKNWTVSSNVEITIE 111
                ++SI+FGGGTPSL     I  I              L    +N     ++EIT+E
Sbjct: 86  SDLPKLTSIYFGGGTPSLAPVDTITSIVNESLKLFNVDRQQLLQQHQNDNHDHSLEITLE 145

Query: 112 ANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
            NP  ++++    ++    +NR+SLGVQ+  ++ L+FLGR H A++A  AI     +F R
Sbjct: 146 VNPDKIDIDKLSDFKNHSLINRVSLGVQAFNDKDLKFLGRTHTANDAKQAISKCNQLFKR 205

Query: 171 MSFDLIYALP-KQTMTQWEMELQRALSYAV-DHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           ++FDLIYA    QT  QW+ E+  A+      H+SLY L  E+GT      K+  ++   
Sbjct: 206 VNFDLIYARHQNQTKEQWKQEINEAIDLCERGHISLYSLCFEEGTKLNNK-KNNQIIPAD 264

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-K 287
            ++  +LY + +      G++ YEISN S     S HNLNYWR GDYIGIGPGA SR+ K
Sbjct: 265 HDLNFELYEIAKQQLERAGINQYEISNFSRENQRSRHNLNYWRGGDYIGIGPGACSRITK 324

Query: 288 VGSHRVAISIEKHPESWLKMVRK--NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +   R ++    HP SW+  V    +G   VE + L+ E++ +E L+MGLR  EG++ + 
Sbjct: 325 LDGTRHSLKCVLHPRSWITQVTDTGDGLDTVESKQLTIEERVNELLLMGLRTVEGVNRET 384

Query: 346 WEMLA-GRNLDIEC----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           ++ +  G++++        + L   G +  +  +RL  T +G  +LD +I  + +
Sbjct: 385 FKSITNGKDIEDVLSATKLKYLISNGMLS-LDNNRLCSTTKGFMLLDKIILEICL 438


>gi|327539421|gb|EGF26037.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopirellula
           baltica WH47]
          Length = 373

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 114/373 (30%), Positives = 184/373 (49%), Gaps = 7/373 (1%)

Query: 24  HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           H PFC  +C YC+F+    R ++ Q+ ++ +   E++ +   +    + +IF GGGTP+ 
Sbjct: 2   HVPFCRHRCGYCNFSVIAGRDEL-QDQYLDAVERELKGIDNSSHELPLRTIFLGGGTPTR 60

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +    +  +   I+  + ++ + EIT EANP  +        +  GVNRISLGVQS + +
Sbjct: 61  LSAARLQRLHRAISNAFPIADDAEITAEANPEDISPECLDALQAIGVNRISLGVQSFDAE 120

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            LR L R H+ S A++AI  A      +S DLI+  P +++  W+ +L  A + ++ H+S
Sbjct: 121 KLRCLERGHDESIALSAIESAHRRVGNVSIDLIFGAPNESLATWQNDLSIAAASSISHVS 180

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            Y LT EKGT F+     GDL    E + + +Y   Q   S+ G   YEIS+ +   A  
Sbjct: 181 TYALTFEKGTSFWSRRSRGDLSETDETLELQMYEAAQQQFSSDGWQQYEISSFARGAARC 240

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
            HNL YW    +  +GPGA   V         S      ++LK +   G+A  E E ++ 
Sbjct: 241 QHNLAYWAGRGWHAVGPGAARFVDGRREVNHRSTT----TYLKRMLAGGNATDETEAITL 296

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-QGF-IERVQFSRLRCTQR 381
           EQ A E    G+R  +GI +   +     NL+    + L + Q   +   +   L+ T+R
Sbjct: 297 EQYARELAAFGVRQLDGIDLSTIDDRTSINLETLLAKTLTKLQSMKLVTHENHHLKLTRR 356

Query: 382 GMTMLDSVIANLA 394
           G+   D+V   L 
Sbjct: 357 GILFADTVATALL 369


>gi|288926556|ref|ZP_06420474.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccae D17]
 gi|288336698|gb|EFC75066.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella buccae D17]
          Length = 372

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 180/379 (47%), Gaps = 14/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YC F S  R     +  +  +   E   MR+   P    +I+ GGG
Sbjct: 3   GLYIHIPFCESRCIYCGFYSTTRTGL--RRRYADALCRE-MEMRRREMPGPPDTIYLGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  + D I K +      EIT+E NP  V  +      +  VNR+S+G Q+
Sbjct: 60  TPSTLGGELLGRVFDYIYKVYGPCEG-EITLECNPDDVTDDFCHALVRLPVNRVSMGAQT 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  LRFL R H+A+E + A+   R      +S DL++  P +T   W+ ++  AL   
Sbjct: 119 FSDARLRFLHRRHSAAEVVTAVERLRRADIRNISLDLMFGFPGETPADWQTDIDNALQLH 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y L  E+GT  ++M   G++    E+V++ +Y++     +A G   YEISN + 
Sbjct: 179 SEHLSAYSLMYEEGTPLHRMLTRGEVEEIDEDVSLHMYDMLIDRLTAVGYEHYEISNFAL 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN +YW    Y+G+G  AHS               + +++L+ +        E 
Sbjct: 239 PGHRSRHNSSYWHGVPYVGLGASAHSYSGTARSWNV----DNLQAYLEAIEAGRLP-SES 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSR 375
           E L    + ++ +   LR REGI++       G  L     R  Q Q   G + +     
Sbjct: 294 EKLDLTTRYNDLITTALRTREGIALDAMRAEFGPALYGYMMRQAQSQLALGLL-QTDSRS 352

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T++G+ + D+V+  L 
Sbjct: 353 LSLTRKGLYVSDAVMVELI 371


>gi|156395073|ref|XP_001636936.1| predicted protein [Nematostella vectensis]
 gi|156224044|gb|EDO44873.1| predicted protein [Nematostella vectensis]
          Length = 394

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 139/387 (35%), Positives = 226/387 (58%), Gaps = 18/387 (4%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C   C +C+FN +VR + +  E   +  + E + + +++G ++I+S++FGGGTPSL 
Sbjct: 1   WPYCKSLCSFCNFNKYVREF-IDHERMKKCLVKECKSLLEISGAKTINSVYFGGGTPSLA 59

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +P   + IL+ + +   ++ N E+T+EANP+S E +  + ++ AG+NR+SLGVQSL E  
Sbjct: 60  KPSTFSAILECLQQKGVLNPNAEVTLEANPTSAESHKLRDFKTAGINRLSLGVQSLSEDE 119

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  LGR  +  E++ ++ +A+ +FP R+S DL++  PKQT  +WE EL+  L    +H+S
Sbjct: 120 LAVLGRQGSCLESLKSLDMAKVLFPGRVSVDLMFGRPKQTAPEWERELEEILPLCDNHIS 179

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +YQLT+ +GT  ++  ++G LV+P  +   DLY  T  +    G + YE+SN +  G ES
Sbjct: 180 IYQLTLHRGTSLFRQVQEGKLVVPDSDQMADLYLTTVDVLEKAGFYQYEVSNFAKPGCES 239

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV------KVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            HNL+YWR   YIGIGPGAH R            RVA      P SW+K V + GH   +
Sbjct: 240 QHNLSYWRGVPYIGIGPGAHGRFYEMSDKDSKMKRVAWVQTLEPNSWMKEVEEFGHGTRK 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEML-------AGRNLDIEC--ERNLQRQGFI 368
           K F S+    +E +M+GLR  EGI  + +          + R +   C   R+   +G +
Sbjct: 300 KVFQSNAVILEEIIMLGLRTSEGIPNERFNHYITATSSGSLREIFEGCSDVRDFMAEGLL 359

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +  +   LR T  G+ ++D++ A++A+
Sbjct: 360 QLDERG-LRATPSGLAVVDTLTASIAL 385


>gi|260494765|ref|ZP_05814895.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260197927|gb|EEW95444.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 367

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 111/375 (29%), Positives = 192/375 (51%), Gaps = 19/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGT 80
           YVH PFC +KC YCDF S ++      E ++   L E++   Q     +   +I+FGGGT
Sbjct: 8   YVHIPFCERKCNYCDFTS-LKGSDSQIERYVNYLLKEIEIYSQKYDLSQKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V+ N  + YRK G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDDLKKILSKFSY----DKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +L+ LGR HN+ EAI   +LA+   F  +S D+I++LP QT+   + +L++ +S   
Sbjct: 123 NDDNLKVLGRIHNSEEAIEVYNLAKECGFKNISLDIIFSLPNQTLAMLQNDLEKLVSLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G       ++  ++Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKAGKFKETDNDLEANMYEYIIEYLKSKEYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HN  YW   +Y+G+G  A   +    ++       + + +   + K+   + EKE
Sbjct: 243 GFESRHNSIYWENKNYLGVGLSAAGYLGNVRYKNFF----NLKDYYNNLDKDILPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L+         ++G R+   I+V   + L       +   +L ++G++ + +   +  +
Sbjct: 299 ILTEGDIEQYRYLVGFRILNKITVPSKKYL-------KRCVSLCKEGYLIKKENGYI-LS 350

Query: 380 QRGMTMLDSVIANLA 394
            +G+ + +  I N  
Sbjct: 351 HKGLMLFNDFILNFI 365


>gi|299140850|ref|ZP_07033988.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
 gi|298577816|gb|EFI49684.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
          Length = 384

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 17/385 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR------QLTGPRSISS 73
           G+Y+H PFC  +C YC F S     +   + ++     EM   +      Q     +I++
Sbjct: 3   GLYIHIPFCASRCIYCGFYS--TTQQSLHQQYVDMLCHEMDLRQTEITGEQADTENTITT 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           I+ GGGTPS++    +  IL  I K W       E+TIE NP  +            VNR
Sbjct: 61  IYLGGGTPSMLSGNQLEQILLYIYKVWGKHIDLRELTIECNPDDMTEAFAARLATLNVNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+G Q+     LRFL R HN  E + A++ L       +S DL++  P++TM +W+ +L
Sbjct: 121 VSMGAQTFNNNRLRFLHRRHNREEIMQAVNYLRHVGIKNISIDLMFGFPEETMEEWQTDL 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q A+   V+H+S Y L  E+GT  + M ++  +    E  ++ +Y +  ++ +  G   Y
Sbjct: 181 QEAIKLNVEHISAYSLMYEEGTPLFHMKQEKKIKDIDEETSLAMYEMLINLLTKAGYEHY 240

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN +  G  SLHN +YW    YIG+G  AHS      H        + ++++  +  N
Sbjct: 241 EISNFARPGYRSLHNSSYWHEVPYIGLGASAHSY----GHGTRKWNISNIKTYMNSIACN 296

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
                E E L+   Q ++ +   LR REGI++ +++   G           +    +  +
Sbjct: 297 RLPY-EIEILNQNMQYNDLITTALRTREGINLTNFKRKYGEERLNYLLHEAKPHLDLGNM 355

Query: 372 QFS--RLRCTQRGMTMLDSVIANLA 394
           + S   L  T++G+   D ++++L 
Sbjct: 356 ELSKHHLSLTRKGLFTSDDIMSDLI 380


>gi|168013912|ref|XP_001759509.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689439|gb|EDQ75811.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 459

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 116/414 (28%), Positives = 194/414 (46%), Gaps = 41/414 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFN---------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
            VYVH PFC ++C YCDF          ++      G  +++     E++   ++   + 
Sbjct: 27  SVYVHIPFCRRRCFYCDFPIVAVGERTDTNKAHMDAGMTDYVDLVCREIRLAAKVNSSKP 86

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + ++FFGGGTPSL+ P  +  I+D + +++ + S  EI++E +P + +V++ +     G+
Sbjct: 87  LQTVFFGGGTPSLLPPPLLLRIIDTLHEHFGIDSGAEISMEMDPGTFDVHSLRQLMDGGL 146

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +R+S+GVQS +   L   GR+H  SE   AI           S DLI +LP Q++  WE 
Sbjct: 147 SRVSMGVQSFQGALLESCGRSHGLSEVYEAIEAIHASGLNNWSLDLISSLPHQSLQDWEH 206

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +  A+  +  H+S+Y L IE+GTLF K +K G   LPS++ A + Y +  +     G  
Sbjct: 207 SINEAVKASPAHVSVYDLQIEEGTLFNKWYKPGQSPLPSDDNAAEFYRMASAKLQDAGFA 266

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G +  HNL YW    Y   G G+ S +  G         K    +++   
Sbjct: 267 HYEISNYAKEGFQCRHNLVYWNNLPYFAFGLGSTSYIG-GRRFSRPRKFKQYREFVEQFE 325

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ------ 363
            +G  V+E    S+E +A + +M+ LRL  G+ ++ +    G  L     + L       
Sbjct: 326 SSG-GVIECPQDSTEDRALDVIMLSLRLARGLDIQAFSQRFGAGLSTLVCKALLPFVSSG 384

Query: 364 ------RQGFIERVQ----------------FSRLRCT-QRGMTMLDSVIANLA 394
                   G I   +                 S +R T   G  + + VIA++ 
Sbjct: 385 HVVFLNADGDILDTEVIKALVQDSRVFGLSRLSYVRLTDPNGFLLSNEVIASIF 438


>gi|318040429|ref|ZP_07972385.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CB0101]
          Length = 435

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 119/411 (28%), Positives = 191/411 (46%), Gaps = 36/411 (8%)

Query: 6   AYENNMTGQ-GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN----------FIQS 54
           A E N  GQ G      Y+H PFC ++C YCDF       +   E           +++ 
Sbjct: 22  AREGNRHGQLGWPPRSAYLHIPFCHRRCFYCDFPVVPLGDRASAEAGAPGSASIAHYLEQ 81

Query: 55  FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
              E+           +S+++ GGGTPSL+  + +  +L  + + + ++   E+++E +P
Sbjct: 82  LQREIALA---PTGPPLSTVYVGGGTPSLLSAEQLRGLLAALRRRFGLAPGAEVSLELDP 138

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR---- 170
           +S +     GY  AGV R+SLG QS  +  L  LGR H +++ + A    R         
Sbjct: 139 ASFDQQRLSGYLAAGVTRVSLGGQSFSDAVLEQLGRRHRSADLLEAAGWLRQAQANGRLQ 198

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
             S DLI  LP Q +  W+ +L +A++    HLS+Y L +E GT+F +M + G L LP  
Sbjct: 199 SWSLDLIQGLPGQNLAGWQEQLHQAIALRPPHLSVYDLIVEPGTVFERMERRGTLALPES 258

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
           ++A DL  LT    +A G   YEISN++  G  S HN  YW    + G G GA       
Sbjct: 259 DLAADLMELTARTLAAAGYGHYEISNYALPGHASRHNRVYWSGAGWWGFGMGA----TAA 314

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSE----QQADEFLMMGLRLREGISVK 344
              V  +  +  E +   + +   A  + +  L+ +       DE  M+GLR REG+ ++
Sbjct: 315 PWGVREARPRTREGYAAWLEQQAAARRQSDGSLTPDGAAGMPLDELWMVGLRRREGVLLQ 374

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
             E L  R       +    QG + R +  R R +   G+ + ++V+  L 
Sbjct: 375 APESLRRR------WQPFVEQGLL-RQEGPRWRLSDPEGLALSNAVLRELL 418


>gi|327312397|ref|YP_004327834.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           F0289]
 gi|326946389|gb|AEA22274.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           F0289]
          Length = 434

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 110/437 (25%), Positives = 191/437 (43%), Gaps = 69/437 (15%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWM-----RQLTGPR 69
           G+Y+H PFC  +C YC F S V      + K  +E ++ +   EM+              
Sbjct: 3   GLYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETA 62

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV---------------SSNVEITIEANP 114
            ++SI+ GGGTPS +  Q++  +   I   + +               ++ +E+T+E NP
Sbjct: 63  ELTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRRQGCAAAPIEVTMECNP 122

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSF 173
             V     +  R   VNRIS+G+Q+  ++ LRFL R H A+EA++A+   R      +S 
Sbjct: 123 DDVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGIGNISV 182

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL++  P +T+ +WE ++   L    +H+S Y L  E+GT  Y++ + G +    + +  
Sbjct: 183 DLMFGFPGETLEEWEADIAHVLELGAEHISAYSLMYEEGTPLYRLLQAGKVREMDDELYR 242

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFL---------------------------------- 259
            +Y++      + G   YEISN + L                                  
Sbjct: 243 KMYDVLIDRLGSAGYEHYEISNFARLTPTLSDESPTLKVQPSKSSPQISNLKSQISNLKV 302

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HN +YW    Y+GIG  AHS            I     +++  +R+      E
Sbjct: 303 PSPFRSRHNSSYWHDVPYVGIGAAAHSYGNGKRSWNVADI----RAYIDAIRERRLP-CE 357

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E + ++   ++ +M  LR REGI +        R+  +       RQG ++     RL 
Sbjct: 358 EEVIDADTHYNDTVMTALRTREGIELSLLSAEY-RSYLMHLAVPFLRQGLLKE-DGGRLH 415

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G+ + DS+++ L 
Sbjct: 416 LTRKGIYVSDSIMSELM 432


>gi|19703895|ref|NP_603457.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714059|gb|AAL94756.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 365

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 111/375 (29%), Positives = 191/375 (50%), Gaps = 19/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E +I   L E++   ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGTDSQIEKYINYLLKEIEIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V+ N  + YRK G+NR+S+G+Q+ 
Sbjct: 67  PSLLPINSLEKILSKFSY----DKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +L+ LGR H++ EAI   +LAR   F  +S D++++LP QT++  + +L++ +S   
Sbjct: 123 NDDNLKVLGRIHSSQEAIEVYNLARECGFDNISLDIMFSLPYQTLSMLQNDLEKLVSLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW    Y+G+G  A   +    ++       + + +   + +N   + EKE
Sbjct: 243 DFESRHNSTYWENKKYLGVGLSAAGYLNNVRYKNFF----NLKDYYNNLDRNILPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L+ E       ++G RL   I +   + L       E   +L ++G++   +   +  +
Sbjct: 299 ILTEEDIEQYRYLVGFRLLNKIIIPSEKYL-------EKCMSLCKEGYLLEKENGYI-LS 350

Query: 380 QRGMTMLDSVIANLA 394
            +G+ + +  I+N  
Sbjct: 351 HKGLMLFNDFISNFL 365


>gi|326435788|gb|EGD81358.1| hypothetical protein PTSG_02077 [Salpingoeca sp. ATCC 50818]
          Length = 443

 Score =  299 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 126/404 (31%), Positives = 196/404 (48%), Gaps = 36/404 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-----QWMRQLTGPRSISSI 74
            +Y+HWPFC   C YCDFN        G++  ++     M         +      + S+
Sbjct: 37  SLYLHWPFCAGICHYCDFNKFKAPRNGGRDGVVEQLEQAMLQCASDHFSRHEEECQVHSV 96

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F+GGGTPSL   + IA +         +S+  E+T+EANP++          +AG+NR+S
Sbjct: 97  FWGGGTPSLARAEFIAEL----HSRLPLSTATEVTLEANPTAGIAPTLTALHQAGINRLS 152

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQ 192
           +GVQS  +  L+ LGR H+  +AI +I  A +IF    +S DL+Y LP QT+  W+  L+
Sbjct: 153 IGVQSFRDADLKVLGRQHSYKDAIKSIEAATSIFGENNVSIDLMYGLPGQTVAAWDEVLE 212

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ALS+ + H+SLY+LTI+  T F+K+ + G           DLY    +   + G   YE
Sbjct: 213 LALSFNLGHMSLYELTIKPNTRFHKLQQAGKFH---HEPLEDLYFHAANKLVSRGYDHYE 269

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN+   G E+ HN+++W+ G+Y+GIGPGA  R    S  V       P+ W+  VR+  
Sbjct: 270 VSNYCKPGREAQHNVHHWQGGEYVGIGPGAVGRYTRNSEVVLAEPYMKPKDWIASVRRGE 329

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-----CERNLQRQGF 367
             V     + S++     L  GLR+R G+ ++ +    G  L          R L   G+
Sbjct: 330 RGVESYTPMPSDEVMAYTLATGLRMRCGVCLQHFGARFGPALTTALTSSPLARQLLELGY 389

Query: 368 IERVQF-----------------SRLRCTQRGMTMLDSVIANLA 394
           ++ V                    RL  T++GM + D+V   L 
Sbjct: 390 VDVVDGAGNTGGEGRAFGGGSSRQRLVPTEKGMAVGDAVQEQLC 433


>gi|315657198|ref|ZP_07910082.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492301|gb|EFU81908.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 471

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 121/470 (25%), Positives = 186/470 (39%), Gaps = 94/470 (20%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQ--------- 64
              +L  YVH P+C+++C YCDFN++       G   +  + L E+              
Sbjct: 3   SPRTLSAYVHVPYCLRRCGYCDFNTYSNLSLGPGVGGYAAALLREIGLYAPDCSVSVAVC 62

Query: 65  ----------------------------LTGPRSISSIFFGGGTPSLIEPQNIALILDGI 96
                                           R+++S+FFGGGTP+++   ++  +L G+
Sbjct: 63  PDGGHKGGGHEGGAGGAGRQDGSHKGGGRQDSRALTSVFFGGGTPTVLPATDLVRVLRGL 122

Query: 97  AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASE 156
           ++ + +    EIT EANP +V     +     G  R+S G+QS     L  L R H    
Sbjct: 123 SETFGLVPGAEITTEANPDTVTPQYLEALAAGGFTRVSFGMQSAVPAVLATLNRTHQQKH 182

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            +A +  AR     +S DLIY  P +++  W   L  AL    DH+S Y L IE GT   
Sbjct: 183 LVAGVRAARAQGLEVSVDLIYGTPGESLADWRTSLDAALELGADHVSCYALVIEPGTALG 242

Query: 217 KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
           +    GD+     +   D Y L     SA GL  YEISN +  G E  HNL YWR  D+ 
Sbjct: 243 RALAQGDIPPVDPDDQADKYELADETLSAAGLQWYEISNWARPGHECRHNLAYWRDQDWY 302

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G GPGAHS +            +HP  W++ ++     V  +E ++ +    E L++ LR
Sbjct: 303 GFGPGAHSHLGSTRFWNL----RHPAKWMQSLQAGHRPVDGQEIVTGDSARLERLLLNLR 358

Query: 337 LREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIE------------------------- 369
           LR+G+ + ++    G +        R L  +G ++                         
Sbjct: 359 LRQGLDLGEYAGEFGVDQAALLSEARELAGEGLLDGALLPEDATSRDRELAQKNGSLSVG 418

Query: 370 -------------------------RVQFSRLRCTQRGMTMLDSVIANLA 394
                                         R   T+RG  + D+VI  LA
Sbjct: 419 QCSQGDGLPHQDEILHQSRSAPDALTSGAGRAMLTRRGRLLADTVIQRLA 468


>gi|268609183|ref|ZP_06142910.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Ruminococcus flavefaciens FD-1]
          Length = 364

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 131/379 (34%), Positives = 194/379 (51%), Gaps = 18/379 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++G+Y+H PFC KKC YCDF S     K   E ++Q+ L  ++            +++F
Sbjct: 2   KNVGIYIHVPFCGKKCSYCDFYSVCYT-KQQTELYVQAVLRNIRHYGD--SELKADTVYF 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+ P+ I  IL  I  ++ V+ N EIT+EANP+++       YR AG+NR+S+G
Sbjct: 59  GGGTPSLLTPEQIGNILSCIRSSFNVADNAEITMEANPATLTPEKLAAYRSAGINRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS+ +  LRFLGR HNA  A  A+   A   F  +S DL+ ALP Q     +  +Q   
Sbjct: 119 VQSMNDDELRFLGRLHNAERAEKAVYDAAEAGFDNISCDLMIALPSQKTESMKHSIQMLT 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  + H+S Y L +E+GT F     D    LP+++   +LY        + G   YE+SN
Sbjct: 179 SLPIQHISAYILKVEEGTPFDC--DDIIASLPNDDETAELYLNMCEELESRGFMQYEVSN 236

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN  YW+  DYIGIGP AHS        V+  I+    S ++       + 
Sbjct: 237 FAKSGFESRHNCRYWKCQDYIGIGPSAHSCFGGKRFAVSRDIDSFINSDVQPTEVTDESP 296

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E         E+ M+ LRL+EG+ ++       R    +   +L + G+IE    + 
Sbjct: 297 CGFE---------EYSMLRLRLKEGLCLERVPE--HRAEIEKKLPSLLKAGYIE-YDGNI 344

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +  T++G  M +SVI  L 
Sbjct: 345 VSLTRKGFLMSNSVIEYLI 363


>gi|299144175|ref|ZP_07037255.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518660|gb|EFI42399.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 398

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 10/396 (2%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            ++S +   +    +  + +Y+H PFC  +C YCDF S +   +    ++ ++   E+  
Sbjct: 8   DFISDF--ILNKNSTEDISLYIHVPFCESRCYYCDFYSSII-NENNVNDYFENLYKELFL 64

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +     + I SIF GGGTPS + P+ I  +++ I    T+  + EITIE NP+SV    
Sbjct: 65  YKDFLKDKKIVSIFIGGGTPSSVNPKYIFKLMEKINLISTIEKSCEITIELNPNSVSSEK 124

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            + Y  + +NR S+G QS  +  L+ +GR H   + I+A  L         + DL+ ALP
Sbjct: 125 LKLYLNSKINRFSMGAQSFNDDILKKIGRIHKKEDIISACKLFGKYNIKNFNLDLMLALP 184

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q     +  ++        H+S Y L +E GT  Y +++   L+ P EN   D+Y+   
Sbjct: 185 SQKFEDIKESIKYIKLLDPAHISYYSLILETGTKLYDINQVNPLIFPDENQDRDMYHYIV 244

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                 G   YEISN S    ES HNL YW+  +Y+G+G  +HS +         S EK 
Sbjct: 245 HSLDDLGYKQYEISNFSKSEFESKHNLRYWKLKNYLGLGISSHSNINNLRFYNHNSFEK- 303

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              +  +++ +   V + E L ++ + +EF+ MGLRL  GI++     +   +     + 
Sbjct: 304 ---YYSIIKTSNLPVQDFEVLDNKDRINEFITMGLRLNSGINISSINKIFKIDFLNYYKN 360

Query: 361 NLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            + +     +  ++   +  T+ G  + + V  +  
Sbjct: 361 EISKNINLNLITIKNETIYLTELGRDLSNLVELDFI 396


>gi|296327466|ref|ZP_06870012.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296155292|gb|EFG96063.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 367

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 110/375 (29%), Positives = 192/375 (51%), Gaps = 19/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E++   ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGTDSQIEKYVNYLLKEIEIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V+ N  + YRK G+NR+S+G+Q+ 
Sbjct: 67  PSLLPINSLEKILSKFSY----DKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +L+ LGR H++ EAI   +LAR   F  +S D++++LP QT++  + +L++ +S   
Sbjct: 123 NDDNLKVLGRIHSSQEAIEVYNLARECGFDNISLDIMFSLPYQTLSMLQNDLEKLVSLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW    Y+G+G  A   +    ++       + + +   + +N   + EKE
Sbjct: 243 DFESRHNSTYWENKKYLGVGLSAAGYLDNVRYKNFF----NLKDYYNNLDRNILPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L+ E       ++G RL   I + + + L       E   +L ++G++   +   +  +
Sbjct: 299 ILTEEDIEQYRYLVGFRLLNKIIIPNEKYL-------EKCMSLCKEGYLLEKENGYI-LS 350

Query: 380 QRGMTMLDSVIANLA 394
            +G+ + +  I+N  
Sbjct: 351 HKGLMLFNDFISNFI 365


>gi|288800059|ref|ZP_06405518.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333307|gb|EFC71786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella sp. oral taxon 299 str. F0039]
          Length = 379

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 113/385 (29%), Positives = 198/385 (51%), Gaps = 20/385 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--------- 70
           G+Y+H PFC  KC YC F S        ++++I++   E+   +Q               
Sbjct: 3   GLYLHVPFCSSKCSYCAFYSVTNNQL--KQDYIEAICKELYLRKQFFKDIHFKNNQFKPL 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +++++FGGGTPS ++      I + I   +  +S  E+TIE NP  + ++  +  +K   
Sbjct: 61  VNTVYFGGGTPSCLDEYAFEKIFNAIYDCFG-NSFEEVTIECNPDDITLSYAKILKKY-A 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           NRISLG+Q+     L+ + R HNA EAI A+ + + +    +S DLI+  PK+T+T W  
Sbjct: 119 NRISLGIQTFNNDQLKLINRRHNAEEAIRAVDIIKEVGISNISIDLIFGFPKETLTDWLF 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++ +A+   V H+S Y L  E+GT  Y + K   +   SE ++V++Y++     S  GL 
Sbjct: 179 DIDQAIKLNVQHVSAYSLMFEEGTKLYHLLKKKKIEQISEELSVEMYDVLIDKLSEAGLA 238

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G ES HN +YW    Y+G+GP AHS   +       ++ ++ +S  K + 
Sbjct: 239 QYEISNFAKPGFESRHNSSYWNETPYLGVGPSAHSYNLLTRSWNVSNVSQYIKSISKDI- 297

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  E+E +    + ++ +   LR ++GI +   +    R + +E      ++G I 
Sbjct: 298 ----LPFEEELIDDITRYNDLVTTALRTKKGILLNSLQGDFSRYI-LEQSSGFIKEGMIM 352

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
           +   +RL  T++G  + D+++A L 
Sbjct: 353 KTTDNRLVLTRKGYYISDAIMAELI 377


>gi|182414600|ref|YP_001819666.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
 gi|177841814|gb|ACB76066.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
          Length = 395

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 112/386 (29%), Positives = 191/386 (49%), Gaps = 15/386 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            + + +LG+YVH PFC   C +C F    +      ++F++    E+  +   T  R ++
Sbjct: 11  AERAAALGLYVHVPFCASTCDFCAFY-QTKPTAQAVKSFVEGVARELGLV---TWSRPVN 66

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++F+GGGTP L+  +++  +   + +    +  VE ++E  P SV V      R+ GV R
Sbjct: 67  TVFWGGGTPGLLAARDLRRLGLLVRERCGGTP-VEWSVEMAPGSVTVERLAALREVGVTR 125

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+GVQS +   L  LGR H+  +   A    R   F  ++ D+++ALP QT  +W+ +L
Sbjct: 126 ISMGVQSFQPALLDALGRQHSREQIYRAYDRVRAAGFASVNIDMMFALPGQTEAEWQNDL 185

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + AL+   DH+S Y LT E+ T  +     G + L        LY  T +  +A G   Y
Sbjct: 186 RAALALEPDHISTYCLTFEEDTALWVKLSQGRVKL-DLEHEARLYESTWAQLAAAGFAQY 244

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G   LHNLN WR  ++ G+GP A S+           + +    W + V ++
Sbjct: 245 EVSNFARPGHACLHNLNTWRMQEWAGVGPSAASQQDGWRGANIADLTR----WRENVDQS 300

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQGFI 368
                ++  L+    A++ L+ GLR+ EG++++ W      A  N+ +     L   G  
Sbjct: 301 LRVTEDRTALTPASLAEDALIFGLRMNEGVNLEVWRTRSPDAPWNVVMALVDRLVADGL- 359

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
            + +  +LR T RG  + D+V A++ 
Sbjct: 360 AQCEGPQLRLTNRGRLLADAVGADVM 385


>gi|188585806|ref|YP_001917351.1| oxygen-independent coproporphyrinogen III oxidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350493|gb|ACB84763.1| oxygen-independent coproporphyrinogen III oxidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 401

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 114/398 (28%), Positives = 190/398 (47%), Gaps = 16/398 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--P 68
           M  +     G+Y+H PFC+ KC YCDFNS   + +    N++++   + +   +  G   
Sbjct: 1   MINKTDYKKGLYIHVPFCLSKCKYCDFNSRELQSQDEITNYLKTIKKQTKTFYRKLGLNQ 60

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-----VEITIEANPSSVEVNNFQ 123
            S  SI+ GGGTPS +  + +  +L    +N   S +      EIT+E NP+S+      
Sbjct: 61  ESWDSIYIGGGTPSCLTEEALHDLLSFYIENSNTSFDNDGQSREITVEVNPNSITSEKAT 120

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQ 182
                 VNRIS+G+QS   + L+ LGR H  ++ I A  L        ++ DLIY +P Q
Sbjct: 121 ILASK-VNRISIGLQSTHSKYLKRLGRIHTWNDFIRAYELLVSKGIDNINVDLIYGIPGQ 179

Query: 183 TMTQWEMELQRALSY---AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            +   E +L    +       H+SLY LTIE+GT   + ++ G+L +  E   V +YN+ 
Sbjct: 180 RLEDLEQDLDLLTNLTPFPPKHISLYNLTIEEGTPLMEEYQTGELPILDEQSEVSMYNMA 239

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           + I    G   YE+SN S  G +  HNL YW   +Y+G+GPGAHS           SI  
Sbjct: 240 REILQDRGYKHYELSNFSKEGYQCRHNLIYWLRHNYLGLGPGAHSLWNSKRFYCTESITD 299

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           + ++           + +   +S E+   E + +GLRL  G+ +++       +++ +  
Sbjct: 300 YLKASQDQDLDERTLIQDCWDVSREEALSERIFLGLRLLSGVDLEEISQEFQLDVEKKFA 359

Query: 360 RN---LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +    L  QGF+ +   S ++ T++   + + V     
Sbjct: 360 KQIKKLIDQGFLTKT-GSVIKLTEKAYMLSNYVFMEFL 396


>gi|322716960|gb|EFZ08531.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 485

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 67  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 126

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  ++++    
Sbjct: 127 LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIDLDVLDH 186

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 187 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 246

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 247 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 305

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 306 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 363

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 364 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 421

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 422 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 465


>gi|156254826|gb|ABU62824.1| radical S-adenosyl methionine domain containing 1 [Danio rerio]
          Length = 444

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 139/390 (35%), Positives = 216/390 (55%), Gaps = 19/390 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C+K+C YC+FN ++ R +   +   +    E + + +L+    I+S+FFGGG
Sbjct: 45  SLYVHWPYCLKRCSYCNFNKYILRSEN-HDTMTECLQKETETLLKLSQVSRITSVFFGGG 103

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL +   IA +L+ + KN  +S   E+T+E NP+       + +  AGVNR S+GVQS
Sbjct: 104 TPSLAQSSTIAAVLETVTKNSNLSDLAEVTLEVNPTPAGKARLKDFTLAGVNRFSIGVQS 163

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L    LR LGR+H+   A+  +  AR + P R+S D+++ALP Q+++ W+ +L+  L   
Sbjct: 164 LNADHLRILGRDHSVQHALQTVSKARKLCPGRVSVDIMFALPGQSVSCWQKQLEELLYVC 223

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQLT+E+GT  +K  + G L +P + V   +Y     +    G H YE+SN + 
Sbjct: 224 DDHISLYQLTLERGTQLFKQVESGKLSVPGDEVTAVMYKTACRVLEESGFHQYEVSNFAR 283

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHA 314
             A S HN+ YWR   YIG+GPGAH R       G  R A +    P+ W+K V+  G  
Sbjct: 284 NNAVSEHNMGYWRGHQYIGVGPGAHGRFVPHGDGGVQREARTQTLEPDVWIKEVQSRGQG 343

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE---------MLAGRNLDIECERNLQRQ 365
              +  L   Q  +E L+MGLR+ EGI+ + WE          + G++      + LQ  
Sbjct: 344 TRRRITLHHLQLLEEVLVMGLRMNEGITHQHWELFSPEANLQQVFGKS---ANIQELQGG 400

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            F+       LRC+  G+ +LDS++  + +
Sbjct: 401 RFLILDDRG-LRCSWEGLVLLDSILPTILL 429


>gi|325955659|ref|YP_004239319.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
 gi|323438277|gb|ADX68741.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
          Length = 374

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 182/379 (48%), Gaps = 13/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC ++C YCDF  H           I + + E++  ++      I +I+FGGG
Sbjct: 3   GLYFHIPFCKQRCTYCDF--HFTTNLSKVNEMIDAIIQEVELRKKTIQS-PIETIYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS+++   ++ +   + K   +SS  E+T+EANP  +     +  R   +NR+S+GVQS
Sbjct: 60  TPSILDNALLSKLFTYLEKKIDLSSLQEVTLEANPDDLTREKLRYLRSTPINRLSIGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L F+ R H A EA  +I +A++  F  ++ DLIY  P  T  QW   L +A+   
Sbjct: 120 FFDNDLTFMHRAHKADEAENSIKMAQDFGFDNLTIDLIYGTPTTTDQQWTKNLNKAVDLQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT+E+ T+     K G      E      + + Q   +      YEISN   
Sbjct: 180 IPHISSYALTVEEKTILNHAIKSGKASDIDEEQQYRQFCILQEFLTQRNYIQYEISNFGK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HN +YW+Y  Y G GP AHS     + R       + + ++K + +      E 
Sbjct: 240 EGFFAKHNTSYWQYKPYYGFGPSAHSY----NGRCRQWNIANNQLYIKTIAQGKLP-CET 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSR 375
           E LS   + +E LM+GLR   GI +++ + L  R++    ++    L  +G ++  +   
Sbjct: 295 ENLSEIDRYNEKLMIGLRTMWGIEIREIKNLFARDIFHSFQKETSLLLAEGLLKE-EEGF 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR         D + + L 
Sbjct: 354 LRIPDENKFYTDGITSRLF 372


>gi|194334815|ref|YP_002016675.1| oxygen-independent coproporphyrinogen III oxidase [Prosthecochloris
           aestuarii DSM 271]
 gi|194312633|gb|ACF47028.1| oxygen-independent coproporphyrinogen III oxidase [Prosthecochloris
           aestuarii DSM 271]
          Length = 374

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 190/379 (50%), Gaps = 9/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L  YVH PFC  +C YCDF    R  +  QE F ++   E +    L   R+I S+ FGG
Sbjct: 2   LHCYVHIPFCRNRCSYCDFFLITR--EGFQEPFFRALREETRSRAILLEGRTIRSVHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++P+++   L+ +A   T    +EIT+EANP  +   +   +   GVNR+S+G+Q
Sbjct: 60  GTPSLVDPRHLEAWLNQVAGYATFHPELEITLEANPEDLTPQSLALWSSIGVNRLSIGIQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR+H+A  A      A   F  +S DLI  +  ++   W  +L  ALS+ 
Sbjct: 120 SYNSRKLHALGRDHDALCARRVTGEAMERFRNVSVDLICGVEGESSALWGADLDDALSFG 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS+Y LT+E  T   +    G + +P E     +Y++     S+ G   YE+SN + 
Sbjct: 180 LQHLSVYMLTVEPSTRLARDVSKGLVQVPGEGELASMYSIASERLSSSGFEHYEVSNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +N+  W+   Y+G GP AHS   +G+     +       ++   R+      ++
Sbjct: 240 AGCFSRYNMGCWQRESYLGFGPSAHSLYTLGAAEWRSANVTSLTRYIAEPRE---LSSQR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEM--LAGRNLDIECERNLQRQGFIERVQFSRL 376
           EFLS + + +E + + LRL+ G+     +        +D   +   +++G+++ V    L
Sbjct: 297 EFLSEKDRRNEQIFLSLRLKTGLDAGLLQRWHSFDPRIDAAVD-AFRQRGWLD-VNGRTL 354

Query: 377 RCTQRGMTMLDSVIANLAV 395
           + T++G    D +   L +
Sbjct: 355 KVTRKGFLFADLIAEELLL 373


>gi|282859545|ref|ZP_06268650.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bivia JCVIHMP010]
 gi|282587773|gb|EFB92973.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella bivia JCVIHMP010]
          Length = 383

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 106/392 (27%), Positives = 191/392 (48%), Gaps = 28/392 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGPRS 70
           G+Y+H PFC  +C YC F + + +    +EN         +I +   E+   +       
Sbjct: 3   GLYIHIPFCASRCIYCGFYATLTKNAAKRENENTLTQRQRYINAVCKEIGKQKA-----E 57

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAK------NWTVSSNVEITIEANPSSVEVNNFQG 124
           +S+I+FGGGTPS +  + +  I + I K      N   +   EITIE NP  +  +  Q 
Sbjct: 58  LSTIYFGGGTPSQLTSEELVQIFEQINKTFLHHTNNGATQLKEITIECNPEDITEDFVQI 117

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
            +    NR+S+GVQ+  ++ L+FL R H +S+   AI L R++    +S DL++  P +T
Sbjct: 118 LKTLPFNRVSMGVQTFSDERLKFLHRRHTSSKIPEAIQLLRSVGINNISIDLMFGFPNET 177

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +W  ++++A++  V+H+S Y L  E+GT  Y M K   +    E    ++Y +     
Sbjct: 178 QEEWIADIEKAIALNVEHISAYSLMYEEGTALYTMQKHQRVKQIDEEQYREMYEVLIDRL 237

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN +  G  S HN +YW    YIGIG  AHS            + K    
Sbjct: 238 EKAGYEQYEISNFAKQGFRSQHNSSYWHNIPYIGIGAAAHSYDLNTRRWNYADLTK---- 293

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           ++  + ++     E+E + +    ++ ++  LR +EG+++ ++E    R   +    +  
Sbjct: 294 YINAIEQDK-PAYEEETIDANTHYNDSIVTALRTKEGLNIAEFEEKYRRYF-LTNAASYI 351

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             G++ R   +    T++G+ + D+++ +L +
Sbjct: 352 ENGYL-RKNDTCYTITRKGLYISDTIMVDLII 382


>gi|282880323|ref|ZP_06289037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305825|gb|EFA97871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella timonensis CRIS 5C-B1]
          Length = 386

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 100/391 (25%), Positives = 184/391 (47%), Gaps = 25/391 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--------- 70
           G+Y+H PFC  +C YC F S        ++ ++ +   E++  R                
Sbjct: 3   GLYLHIPFCASRCIYCGFYS--TTNLSLRQKYVDALCQELRLRRDYLSDIETNLSEDTHL 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILD------GIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           I +I+ GGGTPS + P  +  I +            T+ S  E+T+E NP  +  +  + 
Sbjct: 61  IRTIYIGGGTPSQLTPAQLQQIFEVIGSIYFNGNLSTMRSQCEVTLECNPDDISPSFVEF 120

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
             ++ +NRIS+GVQ+     L FL R H A +   A++  R I    +S DL++  P Q+
Sbjct: 121 IEQSPINRISMGVQTFSNAQLNFLHRRHQAEDVATAVNRLREIGVDNISIDLMFGFPNQS 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  WE ++ + L   V+H+S Y L  E+GT   ++ K   +    + +++ +Y       
Sbjct: 181 LAAWERDILQVLDLGVEHISAYSLMYEEGTPLNQLLKSNKIHEIDDELSLQMYQALVHHL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A G   YEISN +  G +S HN +YW    Y+GIG  AHS     + +         ++
Sbjct: 241 KAAGYEQYEISNFAKPGKQSRHNSSYWHAIPYLGIGAAAHSY----NIKSRQWNVSDLKT 296

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           ++  +++      EKE+L ++ + ++ +   LR  +GI +        R+  ++  +   
Sbjct: 297 YITAIQQGKIP-AEKEWLDADTRYNDLVTTALRTSQGIRLSALTPRY-RSFLLQQAKRFI 354

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            Q  +E ++   +R T  G+ + D+++ +L 
Sbjct: 355 DQHLME-IEGDYIRLTTEGIYISDAIMTDLI 384


>gi|323132345|gb|ADX19775.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 485

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 67  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 126

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 127 LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 186

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 187 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 246

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 247 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 305

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 306 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 363

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 364 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 421

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 422 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 465


>gi|294102149|ref|YP_003554007.1| oxygen-independent coproporphyrinogen III oxidase [Aminobacterium
           colombiense DSM 12261]
 gi|293617129|gb|ADE57283.1| oxygen-independent coproporphyrinogen III oxidase [Aminobacterium
           colombiense DSM 12261]
          Length = 370

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/377 (27%), Positives = 183/377 (48%), Gaps = 17/377 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
           + L VY+H PFC  KCPYC F S  R     ++ +++S   E++W  +  G +  I +++
Sbjct: 2   DPLSVYLHVPFCSVKCPYCAFYSQ-RGTDDEKDAYVRSIEKELRWWDRQYGEKPLIHTLY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +       +++ +  +     + EI+IEANP S+ V +   ++  GV R+SL
Sbjct: 61  VGGGTPTCLSVLQWQRLIESLVTHLERCLDTEISIEANPESLSVEHMALWKDWGVTRVSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QSL +  L +L R+H A+ A+ A+         +S DL++ L  Q++ +W   L   +
Sbjct: 121 GIQSLWDDELLWLKRHHTATRALWAVDQLLKYGFNVSGDLMFGLAGQSLKKWHHSLSGLV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V HLS+YQL+IE+G+++ KM                 Y  +Q      G   YEI++
Sbjct: 181 HSGVSHLSIYQLSIEEGSVWGKMPPS------GLQNGYGHYRWSQWYLEEKGFSQYEIAS 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G E  HN  YW   + + +GP A          V     +    ++  + ++  AV
Sbjct: 235 FAKPGCECRHNQAYWFQKNVLPLGPSAWGYNDG----VRFWNVRTLAEYVDRISQDKSAV 290

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
             KE L  E++  EF ++ LR  +GI +  +    G  L      +LQ       +  + 
Sbjct: 291 EGKECLDLEKRGREFAVLALRTSQGIDISLFTQRFGDKLFNSILSDLQNVPEDCLL--MN 348

Query: 373 FSRLRCTQRGMTMLDSV 389
            + L  +++GM + +++
Sbjct: 349 GTSLALSRKGMRVANAI 365


>gi|262068236|ref|ZP_06027848.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fusobacterium periodonticum ATCC 33693]
 gi|291378104|gb|EFE85622.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fusobacterium periodonticum ATCC 33693]
          Length = 367

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 108/377 (28%), Positives = 190/377 (50%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    ++    +   +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGTDNQIEKYVNYLLKEIDIYSKKYDLSKKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL      ++   N EITIE NP +V++N  + YR  G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLKRILS----RFSYDDNTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +L+ LGR HN+ EAI   ++AR   F  +S D++++LP QT+   +++L++ +S   
Sbjct: 123 NDDNLKILGRIHNSEEAIEVYNMAREVGFENISLDIMFSLPNQTLEMLKVDLEKLISLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F+K  K G L      +   +Y        + G   YEISN S  
Sbjct: 183 EHISIYSLIWEEGTKFFKDLKSGKLKETDNELEATMYEYIIDYLKSKGYEHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             E+ HN  YW   +Y+G+G  A   +    ++       H + +   + KN   V E+E
Sbjct: 243 DFEARHNSIYWENKNYLGLGLSAAGYLGNLRYKNFF----HLKDYYDKLDKNILPVDERE 298

Query: 320 FLSSEQQADEFLMMGLRLREG--ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L+ +       ++G RL     +  K++               L++  ++ + +   + 
Sbjct: 299 ELTEDDIEQYRYLVGFRLLNKPLVPSKEYLEKC---------EILEKDAYLIKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ + +  I N  
Sbjct: 349 LSDKGLMLFNDFIENFI 365


>gi|134133302|ref|NP_001077026.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Danio rerio]
 gi|187611409|sp|A4IGH2|RSAD1_DANRE RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|134026346|gb|AAI35100.1| Rsad1 protein [Danio rerio]
          Length = 444

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 140/390 (35%), Positives = 217/390 (55%), Gaps = 19/390 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C+K+C YC+FN ++ R +   +   +    E + + +L+    I+S+FFGGG
Sbjct: 45  SLYVHWPYCLKRCSYCNFNKYISRSEN-HDTMTECLQKETETLLKLSQVSRITSVFFGGG 103

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL +P  IA +L+ + KN  +S   E+T+E NP+       + +  AGVNR S+GVQS
Sbjct: 104 TPSLAQPSTIAAVLETVTKNSNLSDLAEVTLEVNPTPAGKARLKDFTLAGVNRFSIGVQS 163

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L    LR LGR+H+   A+  +  AR + P R+S D+++ALP Q+++ W+ +L+  L   
Sbjct: 164 LNADHLRILGRDHSVQHALQTVSEARKLCPGRVSVDIMFALPGQSVSCWQKQLEELLYVC 223

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQLT+E+GT  +K  + G L +P + V   +Y     +    G H YE+SN + 
Sbjct: 224 DDHISLYQLTLERGTQLFKQVESGKLSVPGDEVTAIMYKTACRVLEESGFHQYEVSNFAR 283

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHA 314
             A S HN+ YWR   YIG+GPGAH R       G  R A +    P+ W+K V+  G  
Sbjct: 284 NNAVSEHNMGYWRGHQYIGVGPGAHGRFVPHGDGGVQREARTQTLEPDVWIKEVQSRGRG 343

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWE---------MLAGRNLDIECERNLQRQ 365
              +  L   Q  +E L+MGLR+ EGI+ + WE          + G++      + LQ  
Sbjct: 344 TRRRITLHHLQLLEEVLVMGLRMNEGITHQHWELFSPEANLQQVFGKS---ANIQELQGG 400

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            F+       LRC+  G+ +LDS++  + +
Sbjct: 401 RFLILDDRG-LRCSWEGLVLLDSILPTILL 429


>gi|256026885|ref|ZP_05440719.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289764877|ref|ZP_06524255.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716432|gb|EFD80444.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 367

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 189/377 (50%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L EM+   Q     +   +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDSQIERYVNYLLKEMEIYSQKYDLSQKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V+ N  + YRK G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDDLKKILSKFSY----DKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ +L+ L R HN+ EAI   +LAR   F  ++ D++++LP QT+   + +L++ +S   
Sbjct: 123 DDDNLKVLDRIHNSQEAIEVYNLARECGFKNINLDIMFSLPNQTLAMLQNDLEKLVSLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G       ++  ++Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKAGKFKETDNDLEANMYEYIIEYLKSKEYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW   +Y+G+G  A   +    ++       + + +   + K+   V EKE
Sbjct: 243 DFESRHNSIYWENKNYLGVGLSAAGYLGNVRYKNFF----NLKDYYNNLDKDILPVDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGI--SVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L+ +       ++G RL   I    K +              +L ++G++ + +   + 
Sbjct: 299 ILTEKDIEQYRYLVGFRLLNKIIVPSKKYLKRC---------VSLCKEGYLIKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ + +  I N  
Sbjct: 349 LSHKGLMLFNDFILNFI 365


>gi|148241697|ref|YP_001226854.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. RCC307]
 gi|147850007|emb|CAK27501.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. RCC307]
          Length = 410

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 108/400 (27%), Positives = 184/400 (46%), Gaps = 23/400 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTG 67
           +         +Y+H PFC ++C YCDF       +      ++        ++ +     
Sbjct: 3   LPAGRRPPRSLYLHIPFCHRRCFYCDFPVVPLGDQADGSRSQSIADYLHWLLRDLAAAPA 62

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              +S+++ GGGTPS++ P  +A +L  +  +W ++   E+T+E +P+S +    +    
Sbjct: 63  GPPLSTVYIGGGTPSMLSPDQLAQLLAAVRSHWGLAPGAELTLEMDPASFDRQRLEAVLA 122

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQ 182
            G+NR+SLG QS ++  L  LGR H A++   A    R           S DLI  LP+Q
Sbjct: 123 LGINRVSLGGQSFDDAVLEQLGRRHRANQLREACSWLRQAQQQTLLQSWSLDLIVNLPQQ 182

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +   W+ EL +AL+ A  HLS+Y L +E GT+F      G+L+LP ++ A D    T   
Sbjct: 183 SFEAWDWELSQALAQAPPHLSIYDLIVEPGTVFAWRQGRGELLLPDDDQAADRLQHTHQR 242

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             A G   YE+S+ +  G  S HN  YW    +  +G GA S V         + + + E
Sbjct: 243 LQAAGYGHYEVSSWALPGQASRHNRVYWSGASWWALGLGATSGVGTERLARPRTRDAYSE 302

Query: 303 SWLK--MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            W++    R+          +      ++ L++GLR REG+ +          L+     
Sbjct: 303 -WVQADAGRQGDGPAAGWPPV------EDLLLVGLRRREGVDLAWLHQTGLGGLERAWLE 355

Query: 361 NLQRQGFIER----VQFSRLRCT-QRGMTMLDSVIANLAV 395
            +   G+IER    +   RLR     G ++ ++V+++L  
Sbjct: 356 RVLA-GWIERGVVELSAQRLRLVAPEGFSLSNAVLSDLLA 394


>gi|237755862|ref|ZP_04584458.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691973|gb|EEP60985.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 365

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 116/373 (31%), Positives = 189/373 (50%), Gaps = 15/373 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S V +    ++ ++++   E+     L     I +I+FGGG
Sbjct: 4   GIYIHIPFCNIKCPYCDFTSFVWQEDKLKDRYVEALKKELLMY--LDNDFDIQTIYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++P+ IA I+D I  N     N+EIT+E NP + E + F+  + AGVNRIS+G QS
Sbjct: 62  TPSTLKPEKIAEIIDFIKNNVKHQKNLEITVEINPKTYEYDEFKIIKDAGVNRISIGNQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++L  LGR+H   ++   I          ++ DLIY +  QT+   E +L+   S  
Sbjct: 122 FLEKNLTMLGRDHKPEDSYKTIENCLKAGISNINLDLIYGIQNQTLQDLEKDLEIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y LT  + T    + + G   LP E++   ++ +        G   YE+SN + 
Sbjct: 182 ITHISAYMLTAYEDTPLGTLVEKGLYHLPDEDLVYQMFLMIDQALHNKGFERYELSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++GIG  A S +            K+   +L+ V K    V   
Sbjct: 242 KGYECKHNLFYWIDVNFLGIGVSAWSYIDNKRFGNT----KNINEYLENVEKGIKPVKFS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  +++ +E + +GLRL+EGI V   +         +  + L  +G+   V+  R   
Sbjct: 298 EVLDEKKKLEEKIFLGLRLKEGIDVDLIKNK-------DLLKELVDEGY-GDVKDGRFYL 349

Query: 379 TQRGMTMLDSVIA 391
             +G+ +++ ++ 
Sbjct: 350 LPKGIMVINEIVR 362


>gi|318603745|emb|CBY25243.1| coproporphyrinogen III oxidase,oxygen-independent [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 457

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQRLDILQHTISFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TESGYQFIGMDHFARPDDELAIAQREGKLHRNFQGYTTQGESDLLGLGVSAISMLGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 EK  +++  +V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 335 -NYAQNEKDLKTYYAVVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D E     ++ G +ER   S +R T RG  ++ ++ 
Sbjct: 394 IRFADYFADDFELLTPFEQDGLVERDDKS-IRVTPRGRLLIRNIC 437


>gi|269123869|ref|YP_003306446.1| oxygen-independent coproporphyrinogen III oxidase [Streptobacillus
           moniliformis DSM 12112]
 gi|268315195|gb|ACZ01569.1| oxygen-independent coproporphyrinogen III oxidase [Streptobacillus
           moniliformis DSM 12112]
          Length = 360

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 116/378 (30%), Positives = 193/378 (51%), Gaps = 26/378 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC K+C YCDF+  +       E +++  + E++   +        +I+FGGG
Sbjct: 6   GIYIHVPFCNKRCHYCDFHVFINMND-KIERYVEYVIKEIKLYPEYIYD----TIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  + I  ILD + K    + N EIT+E NPS +++   +  + AG+NR+S+G QS
Sbjct: 61  TPSLLNGEQIRKILDNLKK----TDNAEITLELNPSDMDLEKLKYIKNAGINRLSIGFQS 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+F+ R+H++ +AI     AR   F  +S DLI+++P Q M   E +L + L  +
Sbjct: 117 FNDDMLKFMNRDHSSKKAIETYRNARIAGFDNISLDLIFSVPNQDMEMLENDLDKFLELS 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS+Y L  E+GT F K  + G+L    E++  D++   Q      G + YEIS+   
Sbjct: 177 PEHLSIYSLIWEEGTNFTKRLEKGELKALDEDLEADMFLKIQERLVKSGYNHYEISSFCK 236

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN+ YW   +YIG+G  A S           +  K    + +++ +N   + EK
Sbjct: 237 DGKESKHNIKYWNNTEYIGVGVNATSFYNNQR----FAKVKSLARYYRLIDQNIIPIEEK 292

Query: 319 --EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
             E +   +  +   ++GLR+     +K  E      +D      L  +G IER    R+
Sbjct: 293 TIEIVDDVELENLKYILGLRML----IKGVEYTPNEKID-----KLIERGLIERFD-DRI 342

Query: 377 RCTQRGMTMLDSVIANLA 394
           + T +G+ + + V     
Sbjct: 343 KLTSKGVLLSNEVFVEFV 360


>gi|332159651|ref|YP_004296228.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325663881|gb|ADZ40525.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330858977|emb|CBX69336.1| oxygen-independent coproporphyrinogen-III oxidase [Yersinia
           enterocolitica W22703]
          Length = 457

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQRLDILQHTISFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TESGYQFIGMDHFARPDDELAIAQREGKLHRNFQGYTTQGESDLLGLGVSAISMLGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 EK  +++  +V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 335 -NYAQNEKDLKTYYAVVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D E     ++ G +ER   S +R T RG  ++ ++ 
Sbjct: 394 IRFADYFAEDFELLTPFEQDGLVERDDKS-IRVTPRGRLLIRNIC 437


>gi|291563970|emb|CBL42786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [butyrate-producing bacterium SS3/4]
          Length = 379

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 118/381 (30%), Positives = 194/381 (50%), Gaps = 17/381 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFCV+KC YCDF S     +  Q  + +    ++  M +  G   + +IF GGGT
Sbjct: 7   LYLHMPFCVRKCAYCDFLSFPTDQET-QNLYTRRLREDIDAMGKKYGDIPVDTIFIGGGT 65

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS+ +   I  I++ + K + V+   EI++EANP +V       YR+AG+NR+S G+QS 
Sbjct: 66  PSVPDSALIVGIMEHVRKAFHVAEGAEISMEANPGTVTREKLTDYRRAGINRLSFGLQSA 125

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ LGR H  +E + + HLAR   F  ++ DL+ ALP QT   W+  L+R      
Sbjct: 126 NDRELKLLGRIHTWAEFLESFHLARECGFTNINIDLMSALPGQTRESWKDTLKRVTDLNP 185

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD--LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +H+S Y L IE GT F + +   +   +LP E+   ++Y+ T+      G   YEISN++
Sbjct: 186 EHISAYSLIIEDGTPFGEKYGSEEGRKLLPDEDSEREMYHETKRFLQDCGYERYEISNYA 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HN+ YW    Y+G+G GA S +      V   ++++ E       +      +
Sbjct: 246 KPGRACRHNIGYWTGLPYLGLGLGASSYMDGCRFAVNSDMKQYLE-------EKPGMFTD 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQF 373
            E L+ +   +EF  +GLR+  G+S+ ++E   G +   +    L    F+E      Q 
Sbjct: 299 VEKLTKKDMEEEFFYVGLRMTAGVSLPEFERRFGVS-AKDVYPGLMEM-FVEEKAAVFQG 356

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
            R   T  G+ + + ++A   
Sbjct: 357 DRFVLTDYGLDVSNYIMAQFL 377


>gi|153833812|ref|ZP_01986479.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           HY01]
 gi|148869870|gb|EDL68838.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           HY01]
          Length = 463

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 171/408 (41%), Gaps = 29/408 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R ++ + FGGGTP+ +  + I  ++D + + +T S++ EI+IE +P  +E+    
Sbjct: 104 SLLGERQVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDADLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V ++ HA+ +   L ++      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNESRHALWKGVSLDADDLLRREVIKQLICNFKLDKKSIESEF 398

Query: 351 GRNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
           G   +   + +L   G ++         V  + +R T RG  ++ ++ 
Sbjct: 399 GVKFEQYFKEDL---GLLQTFINDELVEVDDNEIRVTLRGRLLIRNIC 443


>gi|225851366|ref|YP_002731600.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Persephonella marina EX-H1]
 gi|225644996|gb|ACO03182.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Persephonella marina EX-H1]
          Length = 366

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 118/378 (31%), Positives = 200/378 (52%), Gaps = 18/378 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KCPYCDF S     K     +I++   E+   ++L     + +++FGGG
Sbjct: 4   GLYIHIPFCSIKCPYCDFVSITSDDKGLHRRYIEALKKEILLYKELDFD--LETVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P+ ++  +  I    +V  + EIT+E NP +    +F+  ++AGVNRIS+GVQS
Sbjct: 62  TPSLLDPELLSEFIYFIKDQISVVESPEITVEVNPKTYRYEDFRIIKEAGVNRISIGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E++LR LGR+H+  ++  A+    ++    ++ DLIY +  Q++   E +L+   S  
Sbjct: 122 FLERNLRMLGRDHSVKDSYKAVEDCLKSGIENINLDLIYGIQNQSLKDLEKDLEIYTSLP 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT  +GT F +  ++G   L  E+   D++ L  S     G   YE+SN S 
Sbjct: 182 VKHISAYMLTPYEGTPFEQSVREGVYRLKDEDELYDMFVLINSYLETQGFLRYELSNWSK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +  HNL YW++  ++GIG  A S +             + + +L+ + K     V  
Sbjct: 242 EGYQCRHNLFYWKHVPFLGIGVSAWSYINGKRSGNTG----NLKEYLEKIEKGKKPAVFS 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--GFIERVQFSRL 376
           E +   +   E + +GLRLREG+ VK    L+G+   ++    L  +  G I      R 
Sbjct: 298 ETIDKSEFLKEKIFLGLRLREGVPVK---YLSGK---LDSVEELVSENFGLI---DGDRF 348

Query: 377 RCTQRGMTMLDSVIANLA 394
             T++G+ +++ +++ L 
Sbjct: 349 ILTEKGLMVINRIVSLLI 366


>gi|237744988|ref|ZP_04575469.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229432217|gb|EEO42429.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 367

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 110/377 (29%), Positives = 191/377 (50%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L EM+   Q     +   +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDSQIERYVNYLLKEMEIYSQKYDLSQKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V+ N  + YRK G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDDLKKILSKFSY----DKNTEITIEVNPKTVDTNKLKEYRKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT+   + +L++ ++   
Sbjct: 123 NDDNLKVLGRIHNSQEAIEVYNLARECGFDNISLDIMFSLPNQTLVMLQNDLEKLVNLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++  ++Y        +     YEISN S +
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEANMYEYIIEYLKSKEYIHYEISNFSKI 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HN  YW   +Y+G+G  A   +    ++       + + +   + K+   + EKE
Sbjct: 243 GFESRHNSIYWENKNYLGVGLSAAGYLDNVRYKNFF----NLKDYYNNLDKDILPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGI--SVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L+ +       ++G RL   I    + +              +L ++G++ + +   + 
Sbjct: 299 ILTEKDIEQYRYLVGFRLLNKIIVPSEKYLERC---------VSLCKEGYLIKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
              +G+ + +  I N  
Sbjct: 349 LNHKGLMLFNDFILNFI 365


>gi|237738363|ref|ZP_04568844.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420243|gb|EEO35290.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 107/377 (28%), Positives = 200/377 (53%), Gaps = 24/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KC YCDF S  +  +  ++ ++   L E+             +++ GGG
Sbjct: 4   GIYIHIPFCMNKCNYCDFLSF-KSNEEERKKYVDYILKEIDLY----PKYEYDTVYLGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +++  I+    K   + +  EIT+E NP +V +   +G++KAG+NR+S+G+Q+
Sbjct: 59  TPSLLNCEDVERII----KKLNIKAGAEITLEVNPKTVNLEKLKGFKKAGINRVSIGIQT 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ L+ LGR HN++E I   + AR   F  +S DL+++LP Q++ + + +L+R L   
Sbjct: 115 FDEKMLQVLGRMHNSNEGIETYYQAREAGFDNISLDLMFSLPNQSIEKVKQDLERLLELR 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L  E+GT F+K  ++        ++   ++       +  G   YEISN   
Sbjct: 175 PEHFSIYSLIWEEGTAFFKKLEEEVYRETDNDLEAQMFEYIIDRATEAGYIHYEISNFCL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E+ HN  YW   +Y+GIG GA   + V  ++  +   K    +   + +    ++E+
Sbjct: 235 PSKEARHNSKYWENREYLGIGLGASGYIGVKRYKNQVQFSK----YYDNIERGILPILEE 290

Query: 319 EFLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           E +++E + +   M+G R L +G+         G+ L+     +L+ QGF++R   + + 
Sbjct: 291 EIVTAETKEEYKYMLGFRLLNKGVIPS------GKYLEKCI--SLEEQGFLKRNGEAYI- 341

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G+ + + V+    
Sbjct: 342 LTRKGIMLANDVLDEFI 358


>gi|326629544|gb|EGE35887.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 485

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 67  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 126

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 127 LFADRHVSQLHWGGGTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 186

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 187 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 246

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 247 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 305

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 306 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 363

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 364 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQPWG 421

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 422 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 465


>gi|295111117|emb|CBL27867.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synergistetes bacterium SGP1]
          Length = 396

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 176/385 (45%), Gaps = 16/385 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           +G+    +Y+H PFC  KC YC F S  R        ++ +   E +  R   G R    
Sbjct: 17  RGARP-SLYLHVPFCAAKCGYCSFYSR-RAGDGEVAAWLDALEAEARAWRDRLGGRVPPR 74

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +++ GGGTPSL+ P +   +L  +     +S   E ++EANPSS+   +   +R  G  R
Sbjct: 75  TLYVGGGTPSLLTPGDWRRVLRILEVMADLSPLEEASVEANPSSLTKEHLAVWRDGGFTR 134

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLGVQSL++  LR +GR H+A+ A+ A+ +       +S DLI+ LP QT+  W   L+
Sbjct: 135 VSLGVQSLDDGELRRIGRLHDAAGALRAMAMVLGAGLHLSVDLIFGLPGQTLRSWSASLR 194

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L+  V HLS YQLT+E      +         P       LY   Q   + +    YE
Sbjct: 195 GVLAAGVGHLSTYQLTLEPDAPMSRQSLSLPDGYP-------LYRYAQWFLAKNKFLQYE 247

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN- 311
           IS+ +  GAE  HNL YWR    + +GP A   +         S     E++L+  R   
Sbjct: 248 ISSFAPSGAECRHNLAYWRQEPVLPLGPAAWGYLDG----WRWSNPPTLEAYLEAARCGF 303

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-NLQRQGFIER 370
              +   E LS   +A E  ++ LR R GI   ++    G  +  E E   L     + R
Sbjct: 304 PDPLAGAERLSPRARALEAAILALRTRWGIDRLEFARRWGTGVLREVEGVLLGLPPRLLR 363

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            +   L  T  GM + ++V   L  
Sbjct: 364 TEEGALALTPSGMRVGNAVWTELMA 388


>gi|238764293|ref|ZP_04625244.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           kristensenii ATCC 33638]
 gi|238697444|gb|EEP90210.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           kristensenii ATCC 33638]
          Length = 459

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ +++ + +N+      E +IE +P  +E++    
Sbjct: 101 LFAGRQVSQMHWGGGTPTYLNKTQISHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R    + D LS++       +LF    K  D  LP+    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELSPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTISFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 280 TESGYQFIGMDHFARPDDELAIAQREGKLHRNFQGYTTQGESDLLGLGVSAISMLGDSYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  +++  +V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 340 QN----EKDLKTYYAVVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHYG 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D E     ++ G +ER     +R T RG  ++ ++ 
Sbjct: 396 IRFADYFAEDFELLAPFEQDGLVERDDDG-IRVTPRGRLLIRNIC 439


>gi|197248034|ref|YP_002148923.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197211737|gb|ACH49134.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 485

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 175/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 67  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 126

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 127 LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 186

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 187 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 246

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 247 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 305

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 306 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 363

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +         G
Sbjct: 364 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVAQQWG 421

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 422 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 465


>gi|228469475|ref|ZP_04054479.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas uenonis 60-3]
 gi|228308990|gb|EEK17642.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas uenonis 60-3]
          Length = 371

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 117/377 (31%), Positives = 184/377 (48%), Gaps = 10/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGG 78
           G+Y+H PFC  +C YCDF  + +     Q +F+++   E++    + T      +I+ GG
Sbjct: 3   GLYLHIPFCPTRCVYCDF--YSQSDLSLQSSFVEALCRELEIYHDRATWATPPRTIYLGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    +  ++  I   W +   +EITIEANP  V      G    G NRISLGVQ
Sbjct: 61  GTPSSLPLPLLERLMQQIRSLWRLDKTIEITIEANPEDVSPEWANGVALLGFNRISLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +++LRFL R H+A++A  A++  R      +S DLI+ALP+     W   L  AL+ 
Sbjct: 121 SWSDETLRFLHRRHSAAQAERAVNYIRQAGIHNVSIDLIFALPEGYERDWTESLAHALAL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H S Y LT E+GT   +M +  +++  SE   V  Y    +     G   YE+SN +
Sbjct: 181 PVTHFSAYGLTYERGTRLDRMRERREVIPSSEETYVTQYYALVAACQKAGFTHYELSNWA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YW    Y+G+GP AHS +                 +++ ++++   + +
Sbjct: 241 LPGFASQHNSAYWAGTPYLGLGPSAHSYMSGHR----WWDVSDIHLYIERLQEDQLPIAD 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E+LS  +  +E +M+GLR   GI ++  E+       ++       QG +       LR
Sbjct: 297 EEWLSPTELYEECVMLGLRTSRGIDLRRAELQ--VEPIMDRATPWLDQGLLILTDDDHLR 354

Query: 378 CTQRGMTMLDSVIANLA 394
            T  G+   D + A L 
Sbjct: 355 LTHDGLIWCDRICAALC 371


>gi|62182466|ref|YP_218883.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62130099|gb|AAX67802.1| O2-independent coproporphyrinogen III oxidase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
          Length = 457

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  ++++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIDLDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|145219103|ref|YP_001129812.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prosthecochloris vibrioformis DSM 265]
 gi|145205267|gb|ABP36310.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlorobium phaeovibrioides DSM 265]
          Length = 373

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 119/379 (31%), Positives = 187/379 (49%), Gaps = 11/379 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +YVH PFC K+C YCDF  ++    +  E+F  +   E      L   ++I +I FGG
Sbjct: 2   LSLYVHIPFCRKRCSYCDF--YLVAGTLRMEDFFVALRRETASRASLLKGQTIGAIHFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+  P  +   L+ +A   + + ++EI +EANP  ++ +    + +AGVNR+SLGVQ
Sbjct: 60  GTPSMASPSLLGSWLEQVASLASFAPDMEIALEANPEDLKGSAANEFHQAGVNRLSLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   + L  LGR H+  EA+AA   A  +F  +S DLI  +P +    W+ +L+RA    
Sbjct: 120 SFSPEKLSSLGRAHSPREAMAAARDAVRMFDSVSLDLICGVPGEDRGVWQDDLERAKESE 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L++E  TL  +    G + +P E      Y        A G   YE+SN + 
Sbjct: 180 AQHVSVYMLSLEPRTLLSRDVSAGRVRVPDEGEQAGFYMQALKELKAAGYGHYEVSNFAM 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S +NL  W+   YIG GP AHS ++     +  + E     +L   +    A   +
Sbjct: 240 PGCHSRYNLASWKREPYIGYGPSAHSFLRTEEGELRTANEASLSRYLSSPQA---AEGFR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
           E L   ++ +E + + LR+  G+S++      G  L  E  + L   + +G+I R +   
Sbjct: 297 EVLGERERFEEQVFLSLRINSGLSIEFLRK--GNTLPNEMMKALETMEERGWI-RYENGT 353

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T  G    D + A L 
Sbjct: 354 LYLTDPGFLFADLIAAELI 372


>gi|328951862|ref|YP_004369196.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobacca
           acetoxidans DSM 11109]
 gi|328452186|gb|AEB08015.1| oxygen-independent coproporphyrinogen III oxidase [Desulfobacca
           acetoxidans DSM 11109]
          Length = 415

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 125/396 (31%), Positives = 182/396 (45%), Gaps = 37/396 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----------------- 62
           G+Y+H PFC  KCPYCDF S      V    ++Q+   E+  +                 
Sbjct: 25  GLYLHVPFCQTKCPYCDFYSITDDSLVF--AWLQALEKEIDLLNRKPVWRRSRAGTNILP 82

Query: 63  -------RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                   +  G     + + GGGTPS +    I+ + D I + +  + + EIT+EANP 
Sbjct: 83  AVGPGHDARAFGCSQFDTFYLGGGTPSCLGQDEISTVFDLIRQGFVFTKDAEITLEANPD 142

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFD 174
            V  +    + + GVNR+SLGVQSL +  LRFL R H+A +A  A+ LAR   F  +  D
Sbjct: 143 DVTADRLHLWGRLGVNRLSLGVQSLLDAELRFLSRRHDALQARQALSLAREAGFENLGVD 202

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+Y LP QT   W   L   L +  +HLS YQLTIE+ T        G +    E    D
Sbjct: 203 LMYGLPGQTKDNWLATLDSILVFQPEHLSCYQLTIEENTPLAAKRAQGLIKPLPEEQQRD 262

Query: 235 LYNLTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
            + LT       G   YEISN +      S HN  YWR+  Y+G+GP AHS       R+
Sbjct: 263 FFLLTSQYLEEQGYLHYEISNFARNEPCISRHNSKYWRHTPYLGLGPAAHSF----DGRL 318

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                +    + + +      +  +E L+ EQ+  E + +GLR + G  +  +  L    
Sbjct: 319 RFWNYRSVAEYCQALAAGKPPLDGREELTVEQRRLEAIYLGLRTKNGALLTFFTSLE--- 375

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              E    L R G + RV   R+  T++G  + DS+
Sbjct: 376 -AEEALSGLCRAGLV-RVYQGRVLPTRQGFLVADSL 409


>gi|237741592|ref|ZP_04572073.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|229429240|gb|EEO39452.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
          Length = 367

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 191/377 (50%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V++N  + Y+K G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLEKILSKFSY----DKNTEITIEVNPKTVDINKLKEYKKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT+   + +L++ ++   
Sbjct: 123 DNNNLKVLGRIHNSQEAIEVYNLARECGFENISLDIMFSLPNQTLAMLQNDLEKLVNLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HN  YW   +Y+G+G  A   +    ++       + + +   + KN   + EKE
Sbjct: 243 GFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFF----NLKDYYNNLDKNISPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRL--REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L+ E       ++G RL  R  +  + +              +L ++G++   +   + 
Sbjct: 299 ILTQEDIEQYRYLVGFRLLNRIIVPSEKYLERC---------VSLYKEGYLIEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ + +  I+N  
Sbjct: 349 LSHKGLMLFNDFISNFI 365


>gi|168821661|ref|ZP_02833661.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205341856|gb|EDZ28620.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320088409|emb|CBY98168.1| O2-independent coproporphyrinogen III oxidase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 457

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 177/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +A    A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDAEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|156972903|ref|YP_001443810.1| coproporphyrinogen III oxidase [Vibrio harveyi ATCC BAA-1116]
 gi|156524497|gb|ABU69583.1| hypothetical protein VIBHAR_00581 [Vibrio harveyi ATCC BAA-1116]
          Length = 463

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 170/408 (41%), Gaps = 29/408 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R ++ + FGGGTP+ +    I  ++D + + +T S++ EI+IE +P  +E+    
Sbjct: 104 SLLGERQVTQLHFGGGTPTFLSENQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V ++ HA+ +   L ++      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNESRHALWKGVSLDADDLLRREVIKQLICNFKLDKKSIESEF 398

Query: 351 GRNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
           G   +   + +L   G ++         V  + +R T RG  ++ ++ 
Sbjct: 399 GVKFEQYFKEDL---GLLQTFINDELVEVDDNEIRVTLRGRLLIRNIC 443


>gi|94499859|ref|ZP_01306395.1| coproporphyrinogen III oxidase [Oceanobacter sp. RED65]
 gi|94428060|gb|EAT13034.1| coproporphyrinogen III oxidase [Oceanobacter sp. RED65]
          Length = 356

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 113/338 (33%), Positives = 187/338 (55%), Gaps = 18/338 (5%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R I SIFFGGGTPSL+  +    +  G+ +      ++EIT+EANP + E   F+GY
Sbjct: 28  IAQRPIHSIFFGGGTPSLLSVEAYEQLFAGLRQRLMFEPDIEITLEANPGTFEAEKFKGY 87

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
            + G+NR+S+G+QS + + L+ LGR H+  EA+AA+ LA+   F   + D ++ LP+Q++
Sbjct: 88  FELGINRLSIGIQSFQNKQLQHLGRIHSGEEAVAAVQLAKQAGFTNFNLDFMHGLPEQSL 147

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +LQ+ L     H+S YQLTIE  T FYK       VLP +    D+    Q++ +
Sbjct: 148 DDAMADLQQGLDLDPTHISWYQLTIEPNTEFYKFPP----VLPKDETLWDIQEQGQALLA 203

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG------SHRVAISIE 298
            HG   YE+S ++    ++ HNLNYW++GDYIGIG GAH ++ +       S     +  
Sbjct: 204 KHGFKQYEVSAYAQPNKQAKHNLNYWQFGDYIGIGAGAHGKLTLPHDDINESRIYRTAKT 263

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--I 356
           + P+ +L + +     +V+++ +++E +  E LM GLRL +GIS + +E   G +     
Sbjct: 264 RLPKDYLNLAK---PFLVKRDNIAAEDRDLECLMNGLRLFDGISAELFEARTGLSFAHIE 320

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  Q+QG +E  +   ++ T +G   L+ ++    
Sbjct: 321 GKVQQAQQQGLLEPGRG--IQATAQGQLFLNELLERFL 356


>gi|256844914|ref|ZP_05550372.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|256718473|gb|EEU32028.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
          Length = 367

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 111/375 (29%), Positives = 192/375 (51%), Gaps = 19/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V+VN  + Y+K G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLEKILSKFSY----DKNTEITIEVNPKTVDVNKLKEYKKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT+   + +L++ ++   
Sbjct: 123 DNNNLKVLGRIHNSQEAIEVYNLARECGFENISLDIMFSLPNQTLAMLQNDLEKLVNLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HN  YW   +Y+G+G  A   +    ++       + + +   + K+   + EKE
Sbjct: 243 GFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFF----NLKDYYNNLDKDILPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L+ E       ++G RL   I +   + L       E   +L ++G++   +   +  +
Sbjct: 299 ILTQEDIEQYRYLVGFRLLNKIIIPSEKYL-------ERCVSLYKEGYLIEKENGYI-LS 350

Query: 380 QRGMTMLDSVIANLA 394
            +G+ + +  I+N  
Sbjct: 351 HKGLMLFNDFISNFI 365


>gi|294785800|ref|ZP_06751088.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294487514|gb|EFG34876.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 367

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 191/377 (50%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V++N  +GY+K G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLEKILSKFSY----DKNTEITIEINPKTVDINKLKGYKKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  +L+ LGR HN+ E+I   +LAR   F  +S D++++LP QT+   + +L++ ++   
Sbjct: 123 DNDNLKVLGRIHNSQESIEVYNLARECGFENISLDIMFSLPNQTLAMLQNDLEKLVNLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++   +Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASMYEYIIEFLKSKDYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HN  YW   +Y+G+G  A   +    ++       + + +   + KN   + EKE
Sbjct: 243 GFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFF----NLKDYYNNLDKNILPIDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREGI--SVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L+ E       ++G RL   I    + +              +L ++G++   +   + 
Sbjct: 299 ILTQEDIEQYRYLVGFRLLNKIIVPSEKYLERC---------VSLYKEGYLIEKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ + +  I+N  
Sbjct: 349 LSHKGLMLFNDFISNFI 365


>gi|21960794|gb|AAM87352.1|AE013983_5 O2-independent coproporphyrinogen III oxidase [Yersinia pestis KIM
           10]
 gi|45434742|gb|AAS60303.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 459

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 172/406 (42%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +++    + E +IE +P  +E++    
Sbjct: 101 LFTGRQVSQMHWGGGTPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LP+    +D+   T    
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTIRFL 279

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +    
Sbjct: 280 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 338

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 339 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 394

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D E     ++ G +ER +   LR T RG  ++ ++ 
Sbjct: 395 GIRFADYFAEDFELLAPFEQDGLVERNETG-LRVTPRGRLLIRNIC 439


>gi|51594379|ref|YP_068570.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108809512|ref|YP_653428.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108810414|ref|YP_646181.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145601123|ref|YP_001165199.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|150260915|ref|ZP_01917643.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CA88-4125]
 gi|153950356|ref|YP_001399025.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|161484735|ref|NP_671101.2| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|161511483|ref|NP_991426.2| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|162421654|ref|YP_001604667.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|165926183|ref|ZP_02222015.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165940226|ref|ZP_02228756.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011477|ref|ZP_02232375.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166213708|ref|ZP_02239743.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167402108|ref|ZP_02307585.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167418791|ref|ZP_02310544.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167427043|ref|ZP_02318796.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470513|ref|ZP_02335217.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           FV-1]
 gi|170026399|ref|YP_001722904.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|186893366|ref|YP_001870478.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|218927242|ref|YP_002345117.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229836130|ref|ZP_04456298.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Pestoides A]
 gi|229841951|ref|ZP_04462106.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229900596|ref|ZP_04515720.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Nepal516]
 gi|294502130|ref|YP_003566192.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|51587661|emb|CAH19261.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774062|gb|ABG16581.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108781425|gb|ABG15483.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|115345853|emb|CAL18711.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CO92]
 gi|145212819|gb|ABP42226.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|149290323|gb|EDM40400.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CA88-4125]
 gi|152961851|gb|ABS49312.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162354469|gb|ABX88417.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           Angola]
 gi|165911858|gb|EDR30505.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922043|gb|EDR39220.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989623|gb|EDR41924.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205110|gb|EDR49590.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962785|gb|EDR58806.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167048483|gb|EDR59891.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167053970|gb|EDR63801.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752933|gb|ACA70451.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis YPIII]
 gi|186696392|gb|ACC87021.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681935|gb|EEO78027.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Nepal516]
 gi|229690261|gb|EEO82315.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229706578|gb|EEO92584.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Pestoides A]
 gi|262360208|gb|ACY56929.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|262364155|gb|ACY60712.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
 gi|294352589|gb|ADE62930.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
          Length = 457

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 172/406 (42%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +++    + E +IE +P  +E++    
Sbjct: 99  LFTGRQVSQMHWGGGTPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LP+    +D+   T    
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTIRFL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 337 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D E     ++ G +ER +   LR T RG  ++ ++ 
Sbjct: 393 GIRFADYFAEDFELLAPFEQDGLVERNETG-LRVTPRGRLLIRNIC 437


>gi|227874460|ref|ZP_03992636.1| possible coproporphyrinogen dehydrogenase [Oribacterium sinus
           F0268]
 gi|227839688|gb|EEJ50142.1| possible coproporphyrinogen dehydrogenase [Oribacterium sinus
           F0268]
          Length = 435

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 122/437 (27%), Positives = 207/437 (47%), Gaps = 44/437 (10%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           M+       +   +G   L +Y+H PFC +KC YCDF S   + +     ++     E++
Sbjct: 1   MEKYRTLLESFEKRGKKPLALYLHIPFCARKCAYCDFLSFPSKEEQKIA-YMAKLREELE 59

Query: 61  WMRQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           W  +    G   + S+F GGGTPS + P+ I   ++ I   + + S+ E +IE NP S  
Sbjct: 60  WRSRDFQKGQYEVLSLFIGGGTPSAVPPEEIEKTMEVIRNCYPIYSHWEASIECNPESAS 119

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               + Y ++G+NR+S G+QS +E+ LRFLGR H  S  + A   AR   F  +S DL+ 
Sbjct: 120 KEALEAYLRSGINRLSFGLQSTQEEELRFLGREHQFSTFLTAYQEARKLGFKNISIDLMN 179

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +P QT   ++  L+       +HLS+Y L IEKGT FY + K+G L LPSE   +++  
Sbjct: 180 GIPLQTPESYKKTLKNISLLKPEHLSIYNLIIEKGTRFYALAKEGKLPLPSEEELLEMDA 239

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
           LT+  T   G+  YE+SN++  G  S+HN  YW    Y+G G  + S  +    +    +
Sbjct: 240 LTKEWTKKMGMSPYEVSNYAKEGFFSVHNYGYWSNVPYLGFGIHSSSYFQHKRWKNTNKL 299

Query: 298 EKHPE------------------------------SWLKMVRKNGHAVVEKEF------L 321
             +                                ++L + ++  H  +E++       L
Sbjct: 300 PLYLSLPFFEKGDSSAVQSGQRPVEKSLDETFSSSTFLSLQKQKSHPSIEEQLCEDVQVL 359

Query: 322 SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSRLRC 378
           + E++ +EF  +GLR   G+S  D+      ++       L++Q   G++     +  R 
Sbjct: 360 TKEEEMEEFFYLGLRRTAGVSEIDFVKRFSVDMHKIFGAVLEKQCKEGYL-LHDNAHYRF 418

Query: 379 TQRGMTMLDSVIANLAV 395
           T+ GM + + ++A   +
Sbjct: 419 TEVGMNLSNVLLAEFLL 435


>gi|300087687|ref|YP_003758209.1| oxygen-independent coproporphyrinogen III oxidase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527420|gb|ADJ25888.1| oxygen-independent coproporphyrinogen III oxidase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 380

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 114/357 (31%), Positives = 178/357 (49%), Gaps = 11/357 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           + L +Y H PFC ++C YC F +   R +     ++ +   E++  R+      + +I+F
Sbjct: 2   SDLSLYFHLPFCRRRCRYCSFVTQAGR-EALIPEYVAALEAELRLRRR--SGAVVRTIYF 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL   + I  ++  +A  + +    EIT+E NP +VE+  F+G+R AG+NR+SLG
Sbjct: 59  GGGTPSLAGAELIGRLVRAVADEYEIGPGAEITLETNPGTVEMAGFRGFRAAGINRLSLG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QSL ++ L +LGR H+A     A+  AR   F  +S D IY LP ++   W   L    
Sbjct: 119 AQSLADRELEYLGRTHSADRVGEAVEEARRAGFDNISLDFIYGLPGRSPVDWRRMLADIT 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   +HLS Y L+I+ GT   +    G       + A D Y          G   YEISN
Sbjct: 179 TLGAEHLSFYGLSIDAGTPLAEAVAAGRDEPVDPDAAADEYESASDCLERAGYLQYEISN 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW+ G+Y+G+G GAHS           +     + +L+ + +   A 
Sbjct: 239 WAAPGRESRHNLVYWQGGEYLGLGAGAHSYADG----RRTANSPDTDEYLECLVERRSAG 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIE 369
           V +E ++ E    E +++GLRL  G+S  D     G +L       ++     G +E
Sbjct: 295 VFEETITPEMGLSETVILGLRLNRGVSAGDIRRRFGIDLFSAYATEIEELRSFGLLE 351


>gi|269959437|ref|ZP_06173820.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           1DA3]
 gi|269835874|gb|EEZ89950.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio harveyi
           1DA3]
          Length = 463

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 94/408 (23%), Positives = 171/408 (41%), Gaps = 29/408 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTHYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R+++ + FGGGTP+ +  + I  ++D + + +T S++ EI+IE +P  +E+    
Sbjct: 104 SLLGERTVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSADAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRGEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDDDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V ++ HA+ +   L ++      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNESRHALWKGVSLDADDLLRREVIKQLICNFKLDKTAIESEF 398

Query: 351 GRNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
           G   D   + +L   G ++         V  S +R T RG  ++ ++ 
Sbjct: 399 GVKFDQYFKEDL---GLLQTFINDQLVEVDDSEIRVTLRGRLLIRNIC 443


>gi|238750771|ref|ZP_04612269.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
           ATCC 43380]
 gi|238710915|gb|EEQ03135.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
           ATCC 43380]
          Length = 459

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 100/406 (24%), Positives = 171/406 (42%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 101 LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVIDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAEQRLDILQHTISFL 279

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 280 TESGYQFIGMDHFARPDDELAIAQRAGKLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 338

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  +++  +V + G+A+     ++ +      ++  L     IS +  E   
Sbjct: 339 AQN----EKDLKTYYAVVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHY 394

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D E     ++ G +ER     +R T RG  ++ ++ 
Sbjct: 395 GIRFADYFAEDFELLAPFEQDGLVER-DDQSIRVTPRGRLLIRNIC 439


>gi|213417296|ref|ZP_03350440.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 443

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|297733622|emb|CBI14869.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 114/395 (28%), Positives = 188/395 (47%), Gaps = 26/395 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            +  Y+H PFC K+C YCDF         +          N+ Q    E++  +    P 
Sbjct: 56  PVSAYIHLPFCRKRCHYCDFPIVALGSSFTPPPEDDPRILNYTQLICREIEATKPECYPT 115

Query: 70  S-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPSL+ P+ ++ I++ +   + +  + E+++E +P + +    +G  + 
Sbjct: 116 PPLETVFFGGGTPSLVPPRLVSDIVEALRLKFGLCLDAEMSMEMDPGTFDAEKLKGLMEL 175

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQW 187
           GVNR+SLGVQ+ +E+ LR  GR H   E   AI   ++      S DLI +LP QT   W
Sbjct: 176 GVNRVSLGVQAFQEEMLRGCGRAHGVKEIYEAIETVKSCGVENWSVDLISSLPHQTPEMW 235

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  LQ  +     H+S+Y L +E+GT F  ++  G+  LPSE  + D Y +  +  S  G
Sbjct: 236 EESLQLVIEAQPTHVSVYDLQVEQGTKFGILYTPGEFPLPSEIQSADFYRMASTTLSNAG 295

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEIS++   G E  HNL YW    + G G G+ S V      V  S  +  + ++  
Sbjct: 296 YNHYEISSYCKGGFECKHNLTYWENKPFYGFGLGSASYVGG----VRFSRPRKMKEYMGY 351

Query: 308 VRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNL 362
           V+     VV      + ++  A + +M+ LR   G+ +K +    G +         R  
Sbjct: 352 VQSLETEVVGCGGNSVDAKDVAMDVVMLSLRTARGLDLKSFRNSFGSSFVASLCMAYRPY 411

Query: 363 QRQGFI------ERVQFSRLRCTQRGMTMLDSVIA 391
            + G +      ER+ F RL     G  + + +I+
Sbjct: 412 VKSGHVVYDGIEERLAFVRLS-DPDGFLLSNELIS 445


>gi|168232927|ref|ZP_02657985.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472858|ref|ZP_03078842.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194459222|gb|EDX48061.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205332848|gb|EDZ19612.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 457

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKSLICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|161505497|ref|YP_001572609.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160866844|gb|ABX23467.1| hypothetical protein SARI_03656 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 457

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 176/406 (43%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFSQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRQVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEIDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +       ++ ARNI F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEELIFMLLNHARNIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++       TLF    K  +  LPS    +D+   T    
Sbjct: 219 PESFAFTLQRVTELNPDRLSVFNYAHLP-TLFAAQRKIKNTDLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +  G 
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGALHR-NFQGYTTQGDTDLLGMGVSAISMIGDG- 335

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
               +  +K  + + + V   G+A+     L+ +      ++  L     +     E   
Sbjct: 336 ---YMQNQKELKRYYQQVNARGNALWRGITLTRDDCIRRDVIKALICNFRLDFSAVEQQW 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 393 GLHFAEYFTEDLQLLAPLAKDGLVDVNEKG-IQVTPKGRLLIRNIC 437


>gi|16762428|ref|NP_458045.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16767269|ref|NP_462884.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29143916|ref|NP_807258.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|161617126|ref|YP_001591091.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167995109|ref|ZP_02576199.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237618|ref|ZP_02662676.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168263105|ref|ZP_02685078.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|194737499|ref|YP_002116924.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|204930367|ref|ZP_03221344.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|213162856|ref|ZP_03348566.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425464|ref|ZP_03358214.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213612841|ref|ZP_03370667.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|238913944|ref|ZP_04657781.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289829359|ref|ZP_06546971.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|60392332|sp|P0A1E1|HEMN_SALTY RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|60392333|sp|P0A1E2|HEMN_SALTI RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|25284567|pir||AD0950 oxygen-independent coproporphyrinogen III oxidase [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|509500|gb|AAA19690.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16422566|gb|AAL22843.1| O2-independent coproporphyrinogen III oxidase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16504733|emb|CAD03096.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29139552|gb|AAO71118.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|161366490|gb|ABX70258.1| hypothetical protein SPAB_04966 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194713001|gb|ACF92222.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197289446|gb|EDY28811.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|204320771|gb|EDZ05973.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205327147|gb|EDZ13911.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205348306|gb|EDZ34937.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|261249120|emb|CBG26981.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267996287|gb|ACY91172.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160511|emb|CBW20041.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312915117|dbj|BAJ39091.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225288|gb|EFX50346.1| Coproporphyrinogen III oxidase, oxygen-independent [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322613074|gb|EFY10024.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619145|gb|EFY16028.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322626011|gb|EFY22823.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626531|gb|EFY23337.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632358|gb|EFY29106.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635162|gb|EFY31883.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642761|gb|EFY39350.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647926|gb|EFY44398.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650676|gb|EFY47077.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652859|gb|EFY49196.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657174|gb|EFY53454.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662340|gb|EFY58555.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666875|gb|EFY63051.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672145|gb|EFY68260.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675867|gb|EFY71939.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681719|gb|EFY77745.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684088|gb|EFY80097.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323193360|gb|EFZ78575.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197717|gb|EFZ82850.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323200711|gb|EFZ85782.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207286|gb|EFZ92238.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211488|gb|EFZ96329.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323218468|gb|EGA03176.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221052|gb|EGA05484.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226027|gb|EGA10246.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231707|gb|EGA15819.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236046|gb|EGA20124.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239534|gb|EGA23583.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243874|gb|EGA27885.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249236|gb|EGA33153.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250522|gb|EGA34405.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258976|gb|EGA42628.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260221|gb|EGA43844.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265340|gb|EGA48837.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270562|gb|EGA54008.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|332990832|gb|AEF09815.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 457

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|200388327|ref|ZP_03214939.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199605425|gb|EDZ03970.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 457

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFANRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|253581437|ref|ZP_04858662.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251836507|gb|EES65042.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 358

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 113/377 (29%), Positives = 206/377 (54%), Gaps = 24/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KC YCDF S  +  +  ++ ++   L E+        P   ++++FGGG
Sbjct: 4   GIYIHIPFCLNKCNYCDFLSF-KSNEESRKKYVDYLLKEIDLY----PPYKYNTVYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++ ++I  IL    K   +  + E+T+E NP +V+ N     +K G+NR+S+G+QS
Sbjct: 59  TPSLLDFEDIDRIL----KKLDIEEDAEVTLEVNPKTVDYNKLVQLKKIGINRLSIGIQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ LR LGR H++ E I   + AR   F  +S DL+++LP Q++ + E +L++ LS  
Sbjct: 115 FDEKYLRILGRMHSSEEGIETYYNARKAGFENISLDLMFSLPGQSVEEVENDLKKLLSIK 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L  E+GT+F++  K G L      +  D++     I    G   YEISN S 
Sbjct: 175 PEHFSIYSLIWEEGTVFFEKLKKGLLRETENEIEADMFEKIIDIAEKAGYIHYEISNFSL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E++HN  YW   +Y+GIG GA   +    ++  +   ++  S    +   G  ++EK
Sbjct: 235 PQKEAIHNTKYWENKEYLGIGLGASGYIDNLRYKNQMKFLEYYGS----IESKGKPIIEK 290

Query: 319 EFLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           E L+S+++ +   ++G R L++G+  +      G  ++     +L+++G++++       
Sbjct: 291 ERLTSKEKEEYKYILGFRLLKKGVRPE------GEYIEKCI--SLEKRGYLKK-SGEYFI 341

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G+ + + V+    
Sbjct: 342 LTKKGLMVANDVLDEFI 358


>gi|254431804|ref|ZP_05045507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cyanobium sp. PCC 7001]
 gi|197626257|gb|EDY38816.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Cyanobium sp. PCC 7001]
          Length = 431

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 127/402 (31%), Positives = 193/402 (48%), Gaps = 29/402 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE------NFIQSFLTEMQW-MRQLTGPRS 70
               Y+H PFC ++C YCDF       + G          I ++L  ++  + Q  G   
Sbjct: 5   PRSAYLHIPFCHRRCFYCDFPIVPLGDRAGPAPGQPGAASIDAYLALLRREIGQAPGATP 64

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S+++FGGGTPSL+EP  I  ++  + + + ++   EIT+E +P+S +    +GY  AGV
Sbjct: 65  LSTVYFGGGTPSLLEPTQIGELVRDLRRQFGLAPGAEITLELDPASFDRQRLRGYLAAGV 124

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMT 185
           NR+SLG QS ++  L+ LGR H+  +   A    R           S DLI A+P QT+ 
Sbjct: 125 NRVSLGGQSFDDGVLQQLGRRHSGGDLREAAGWLRQAHRSGALGSWSLDLIQAVPGQTLP 184

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W  +L+ A+     HLS+Y LTIE GT+F +  + G L LP +++A DL  LT S  +A
Sbjct: 185 AWRQQLEEAIGSGAPHLSVYDLTIEPGTVFARRLEQGRLELPQDDLAADLMELTSSELAA 244

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YE+SNH+  G  S HN  YW    + G G GA S    G  +          +WL
Sbjct: 245 AGYGRYEVSNHALPGHASRHNRVYWSGAGWWGFGMGATS-APWGQRQARPRTRDAYRAWL 303

Query: 306 KMVRKNGHAVVEKEF---LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-- 360
                   A         +      DE LM+GLR REG+ + +     G + D+      
Sbjct: 304 TSGAAEAGAGEAGMAEIGVDPGMPLDERLMVGLRRREGVRLPELLRQVGWD-DMAIAAGL 362

Query: 361 -NLQRQ-------GFIERVQFSRLRCT-QRGMTMLDSVIANL 393
             L+RQ       G +   +  R R +   G+ + ++V+  L
Sbjct: 363 GRLRRQLEPWMTRGLLLE-EGERWRLSDPEGLALSNAVLREL 403


>gi|260599980|ref|YP_003212551.1| coproporphyrinogen III oxidase [Cronobacter turicensis z3032]
 gi|260219157|emb|CBA34512.1| Oxygen-independent coproporphyrinogen-III oxidase [Cronobacter
           turicensis z3032]
          Length = 485

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 166/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +   +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 67  ADFARAVARYPDRPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAP 126

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++    
Sbjct: 127 LFAGRHVSQLHWGGGTPTYLSKAQISRLMGLLRANFEFNDDAEISIEVDPREIELDVLDH 186

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
               G  R+S+GVQ   ++  R + R  +     A I  AR   F   + DLIY LPKQT
Sbjct: 187 LHAEGFRRLSMGVQDFNKEVQRLVNREQDEDFIFALIKRAREVGFTSANIDLIYGLPKQT 246

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++       TLF    K  +  LPS    +D+   T    
Sbjct: 247 PESFAFTLQRVAELNPDRLSVFNYAHLP-TLFAAQRKIKEADLPSAQQKLDILQQTIQSL 305

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 306 THAGYQFIGMDHFAKPNDELAIAQREGVLHRNFQGYTTQGDTDLLGLGVSAISMIGDGYA 365

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD----WE 347
           +     +K  + + + V + G+A+     L+ +      ++  L     +   +    W 
Sbjct: 366 QN----QKELKRYYQAVDEQGNALWRGLELTRDDCIRRDVIKALICNFRLDFAEIEKAWS 421

Query: 348 MLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +        D++    L + G ++  +   +  T +G  ++ +V 
Sbjct: 422 LRFADYFAEDLQLLAPLAKDGLVDVNERG-ITVTAKGRLLIRNVC 465


>gi|154491766|ref|ZP_02031392.1| hypothetical protein PARMER_01382 [Parabacteroides merdae ATCC
           43184]
 gi|154088007|gb|EDN87052.1| hypothetical protein PARMER_01382 [Parabacteroides merdae ATCC
           43184]
          Length = 350

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 178/351 (50%), Gaps = 10/351 (2%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +E +I + + EM+  ++  G   + +I+FGGGTPS ++  +   I +   + +  SS  E
Sbjct: 4   KEPYIDAAIREMELRQEYIGGEPLDTIYFGGGTPSQLQQADFERIFEAADRLFGTSSCTE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP  +        R    NRIS+GVQS +E+ LRFL R HN  +A+ A+ L +  
Sbjct: 64  ITLEANPDDMTPEYVASLRNLPFNRISMGVQSFKEKDLRFLNRRHNREQALRAVGLCKEN 123

Query: 168 F-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
               +S DLIY LP QT+ +W+  L  A+   + H+S Y L  E+GT  YK+ + G +  
Sbjct: 124 GIQNISIDLIYGLPGQTLEEWQENLDDAIRLEIPHISAYHLIYEEGTALYKLMEAGKVTP 183

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
             E+++V L++   +  +  G   YEISN    G  S HN +YW    YIGIGP AHS  
Sbjct: 184 IEEDLSVTLFSTLINRLTEAGYLHYEISNFGRPGYFSRHNSSYWTGTKYIGIGPSAHSYD 243

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                    S+ ++ +       K G   +E E L    + ++F++ GLR   GI   D 
Sbjct: 244 GESRQWNISSLPRYLQGI-----KAGIPDIEIEELDINTKYNDFIITGLRTMWGIRTADI 298

Query: 347 EMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               G       E+      RQG + R +   L  +++G+ + D ++++L 
Sbjct: 299 RERFGEEKQTYLEQQAATYLRQGLLIR-ENDTLTLSKKGIFISDGIMSDLL 348


>gi|288575081|ref|ZP_06393438.1| oxygen-independent coproporphyrinogen III oxidase
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570822|gb|EFC92379.1| oxygen-independent coproporphyrinogen III oxidase
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 390

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 15/382 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S  L VY+H PFC  KCPYC F S V R       ++ +  +E+  + +L+G      ++
Sbjct: 18  SEPLSVYLHVPFCRSKCPYCSFASSVPR-SGDVALYLSALESELAGLTRLSGGSLPARTL 76

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+++  +    ++D + +     S  E ++EANP S+   + + +R  G++RIS
Sbjct: 77  YIGGGTPTVLSVEEWTRLMDLLDRYIDRGSIEEFSVEANPESLSDGHLRFWRDRGISRIS 136

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +GVQSL++  LR+LGR H+++EA  A+  +      +S DL++ L  QT+ +W   L+  
Sbjct: 137 IGVQSLDDDELRWLGRLHDSNEARRAVIASVASGFDVSGDLMFGLKGQTLRKWHRSLKAL 196

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V H+SLYQLT++  + + K   +G             Y   Q      G   YEI+
Sbjct: 197 AELGVGHMSLYQLTLDNDSFWGKKPPEGVFD------GYSHYRWAQWYLPRIGFDQYEIA 250

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           + +  G  SLHNL YW   + +G+GPGA   +    +    S       +   VR +G A
Sbjct: 251 SFALEGHWSLHNLAYWNRDNVVGLGPGAWGYLNGLRYENDPS----LAGYRDSVRSSGFA 306

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQ 372
           VV  E +    +A E  ++ LR + GI +  +    G  L     + L       +E  +
Sbjct: 307 VVYSERIGGVAEASESAILALRTKWGIDLDGFCRRFGSGLKARLLKCLSEIPDNCLEWRK 366

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            S +  T++GM + +S+   L 
Sbjct: 367 GS-VALTRKGMRVANSIWERLL 387


>gi|258404588|ref|YP_003197330.1| oxygen-independent coproporphyrinogen III oxidase [Desulfohalobium
           retbaense DSM 5692]
 gi|257796815|gb|ACV67752.1| oxygen-independent coproporphyrinogen III oxidase [Desulfohalobium
           retbaense DSM 5692]
          Length = 391

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 116/379 (30%), Positives = 182/379 (48%), Gaps = 13/379 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H+PFC  KC YC F S     +     + +    E +   +      + +++ GGGT
Sbjct: 12  LYIHFPFCRSKCAYCAFASGPGSRE-DIAAWTRLVCAEARLWGRRLAKPELQTVYLGGGT 70

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQS 139
           PSL+ P+++  ++  +   +     +E T+EANP S  +    +     GVNRIS GVQS
Sbjct: 71  PSLLPPESLHRLVHTLQSAFVWPQGIEWTLEANPDSFQDPAYAKSLYDLGVNRISFGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + ++ L  LGR H A++A+ A+ LAR      +S DL++ LP  T+TQWE  L++AL+  
Sbjct: 131 MADRELDLLGRAHTAAQAVRAVTLAREAGVSNISLDLLWGLPGHTLTQWEHTLEQALALK 190

Query: 199 VDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             HLS Y LT E  T     +       LP E++   +Y+ T       GL  YEI+N +
Sbjct: 191 PRHLSCYGLTPEPDTPLAGDLEARAIPPLPDEDMLTAMYDHTVDALGQFGLEQYEIANFA 250

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW+   Y+G+GP A S ++        +   H  ++ + V +       
Sbjct: 251 QPGWESQHNSGYWQGWPYLGLGPAAVSTLEGSR----WTNPTHLAAYARAVTQQTLG-QS 305

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFS 374
              L+  ++  E LM+ LR R G+    +    G +    C      LQ Q   + +   
Sbjct: 306 AHQLTCRERCLETLMLQLRTRAGLDCSTFAREFGTDPLTACPELCAQLQNQRLAD-IAAG 364

Query: 375 RLRCTQRGMTMLDSVIANL 393
            LR T  GM M +S+   L
Sbjct: 365 TLRLTSAGMLMANSITERL 383


>gi|223935942|ref|ZP_03627857.1| oxygen-independent coproporphyrinogen III oxidase [bacterium
           Ellin514]
 gi|223895543|gb|EEF61989.1| oxygen-independent coproporphyrinogen III oxidase [bacterium
           Ellin514]
          Length = 389

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 189/389 (48%), Gaps = 25/389 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KC YC F S     ++    ++ + + E++ +     PR+I   FFGGG
Sbjct: 12  SLYVHVPFCAHKCSYCAFYSEASNGEI-INRYVCALIRELEMVASDLKPRTI---FFGGG 67

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+  +    IL  + +   ++   E T+E NP++V +   +  R  GVNRIS+GVQS
Sbjct: 68  TPSLLNLRQWEQILQTMQRL-GLTGAAEWTVECNPATVSLEKAKLLRSFGVNRISMGVQS 126

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L+E  L  LGR H+      +   L    F  ++ DL++A+P QTM  W   L  A +  
Sbjct: 127 LDENLLDRLGRIHSREMVFKSFDTLRAAGFDNVNIDLMFAIPGQTMKIWRDTLAEATALG 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +HLS Y++  E  T  Y   K G+  +  E +A  +Y    ++ SA G H YEI+N + 
Sbjct: 187 SEHLSSYEVIYEDDTPLYAQLKAGEFDV-DEALACAMYEELVTVASASGFHQYEIANFAK 245

Query: 259 ---------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                          HN+NYWR G Y G+GP A   V      +      + + + + + 
Sbjct: 246 HSAATPSDIPDHACQHNVNYWRGGCYYGLGPSATGNV----RGIRNKNWSNTQMYCEQLE 301

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQG 366
           +   A+  KE L+   +A E    GLR+  G   + ++ + G +L  +  R    L +QG
Sbjct: 302 QGKRAIESKEELAPLSRAGEIAAFGLRMNAGWPFEKFKQVTGCDLRHDWSREMDQLVQQG 361

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +  R+   R + T RG+   DS  A L +
Sbjct: 362 W-GRLDQYRFQLTSRGLRFADS-AAELFL 388


>gi|218295222|ref|ZP_03496058.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           aquaticus Y51MC23]
 gi|218244425|gb|EED10950.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           aquaticus Y51MC23]
          Length = 368

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 127/382 (33%), Positives = 191/382 (50%), Gaps = 23/382 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            N   +YVH PFC   CPYCDF+  VRR  V  E +++    E + +  L  P  +S+++
Sbjct: 2   PNPASLYVHVPFCPTLCPYCDFH-VVRRGGVWVEAYLKRLGEEAKAL-HLAYPEPLSTLY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS +  + +  +   +   W +    E+T+EANP ++  +     +  GVNR+SL
Sbjct: 60  LGGGTPSYLRDRELVALFQSLP--WRLQEGAEVTLEANPGTLSPSRLALLKDLGVNRLSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +++ LRFLGR H    A+ A+ +A     R+S DLI  LP Q     E +L+ A 
Sbjct: 118 GVQSFQDEVLRFLGRAHGRKGALKAVEMALEAGFRVSIDLILGLPMQ---DVEKDLKEAA 174

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V H+S Y L +EKGT F  +    D                + +    GL  YE+SN
Sbjct: 175 RLGVGHVSAYTLQVEKGTPFALLGLRED-----PEREAWAMERAEEVLGEAGLLRYEVSN 229

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHA 314
            +  G E+ HNL YWR G ++ +GP A  +        A      P   WL      G A
Sbjct: 230 FAREGEEARHNLVYWRAGFWLALGPAATGQYPGEGPAYAFRRTGPPLPRWL-----TGEA 284

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
             E E ++  + A E LM+GLRL+EG+ V + E   G +L          L ++G +  +
Sbjct: 285 PRE-EAITPLEHAKEALMLGLRLKEGVDVGELEGRTGLSLWPALEARAEALAQEGLL-LL 342

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
              RLR T +G+ +L++V+ +L
Sbjct: 343 SGKRLRPTGKGLALLNAVVLSL 364


>gi|326625715|gb|EGE32060.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 459

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 41  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFADRHVSQLHWGGGTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 221 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 280 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 338 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 395

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 439


>gi|238785633|ref|ZP_04629611.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           bercovieri ATCC 43970]
 gi|238713468|gb|EEQ05502.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           bercovieri ATCC 43970]
          Length = 462

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 174/406 (42%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 44  AAFQRAVQRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 103

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+    + E +IE +P  +E++    
Sbjct: 104 LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPDAEQSIEVDPREIELDVLDH 163

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 164 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 223

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 224 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQRLDILQHTISFL 282

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +    
Sbjct: 283 TESGYQFIGMDHFARPDDELAVAQREGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  +++   V + G+A+     ++ +      ++  L     I+ +  E   
Sbjct: 342 AQN----EKDLKTYYACVEQRGNALWRGLTMTDDDCLRRDVIKTLICHFQINYQPIEQQY 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G +       D E     ++ G +ER +   +R T RG  ++ ++ 
Sbjct: 398 GIHFADYFAEDFELLAPFEQDGLVERDEKG-IRVTPRGRLLIRNIC 442


>gi|167551518|ref|ZP_02345273.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168244250|ref|ZP_02669182.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168467333|ref|ZP_02701170.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194443776|ref|YP_002043226.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448265|ref|YP_002048007.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197262083|ref|ZP_03162157.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198243649|ref|YP_002217925.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207859196|ref|YP_002245847.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|194402439|gb|ACF62661.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194406569|gb|ACF66788.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195630221|gb|EDX48861.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197240338|gb|EDY22958.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197938165|gb|ACH75498.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|205323686|gb|EDZ11525.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205336920|gb|EDZ23684.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|206710999|emb|CAR35367.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
          Length = 457

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|205354413|ref|YP_002228214.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205274194|emb|CAR39211.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
          Length = 457

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKTQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQPWG 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|254304212|ref|ZP_04971570.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324404|gb|EDK89654.1| coproporphyrinogen oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 367

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 192/375 (51%), Gaps = 19/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      + ++   L E++  ++         +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGTDNQIKKYVNYLLKEIEIYKKKYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V  N  + YRK G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLEKILSKFSY----DKNTEITIEVNPKTVNSNKLKEYRKLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +L+ LGR HN+ EAI   +LAR   F  +S D++++LP QT++  + +L+R ++   
Sbjct: 123 NDDNLKLLGRIHNSEEAIEVYNLARECRFDNISLDIMFSLPNQTLSILQDDLERLVNLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++  ++Y        +     YEISN S  
Sbjct: 183 NHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEANMYEYIIEFLKSKDYIHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             E+ HN  YW    Y+G+G  A   +    ++       + + +   + KN   + E+E
Sbjct: 243 DFEARHNSIYWENKQYLGVGLSAAGYLANVRYKNFF----NLKDYYNNLDKNILPIDERE 298

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            L+ E       ++G RL   + V      + + LD     +L ++G++   +   +  +
Sbjct: 299 ILTEEDIEQYRYLVGFRLLNKVIVP-----SEKYLDKCV--SLSKEGYLLEKENGYI-LS 350

Query: 380 QRGMTMLDSVIANLA 394
            +G+ + +  I+N  
Sbjct: 351 HKGLMLFNDFISNFI 365


>gi|123440427|ref|YP_001004421.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087388|emb|CAL10169.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 457

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 97/405 (23%), Positives = 170/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LP+    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTISFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TESGYQFIGMDHFARPDDELAIAQREGKLHRNFQGYTTQGESDLLGLGVSAISMLGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  +++  +V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 338 QN----EKDLKTYYAVVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D E     +  G +ER   S +R T RG  ++ ++ 
Sbjct: 394 IRFADYFAEDFELLTPFEHDGLVERDDKS-IRVTPRGRLLIRNIC 437


>gi|313901160|ref|ZP_07834648.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. HGF2]
 gi|312954118|gb|EFR35798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium sp. HGF2]
          Length = 367

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 117/380 (30%), Positives = 189/380 (49%), Gaps = 25/380 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VYVH PFC   C YCDF +  R +    + ++ +   E+Q   +     S+ +++ GGG
Sbjct: 3   AVYVHVPFCRDICAYCDF-TRCRYHAGLADQWLIAVKRELQ---EKLAQVSVETVYIGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +L  +A   T     E T+EAN  S++ +  +  ++ GVNRISLGVQ+
Sbjct: 59  TPSALNSRQLEQLLKLLAPYTT--QVQEYTVEANVESLDEDKMKLLKRYGVNRISLGVQT 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS-Y 197
           L+   L  +GR H   E +  I          +S DLIY LP+QTM  W+ +LQ  +  +
Sbjct: 117 LQPVLLSIIGRRHTREEVVERIRQLHQYGIHNISIDLIYGLPQQTMEMWQDDLQDIVQHF 176

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY LTIE+ + F +      +     +V  D+Y    S    HG   YEISN +
Sbjct: 177 QISHISLYALTIEEHSQFGR----DGVENIDADVETDMYLYAVSYLKKHGFIQYEISNFA 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
              A SLHN  YW Y D+ GIG GA  +    S  +     ++  ++L+       +  +
Sbjct: 233 KPNAASLHNQMYWNYEDFCGIGCGASGK----SGHIRYDNTRNLHTYLQ-----KGSCPD 283

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFS 374
              LS + +  E LMM LR+++G+S+  +      + +      LQ+    G + +V+  
Sbjct: 284 IIELSRQDEMFEMLMMALRMKKGMSLSLFRERFAADFETIYSAPLQKNIANGML-QVKDD 342

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +R T+ GM +L  V+ +  
Sbjct: 343 HVRTTEEGMLLLHDVLVDFL 362


>gi|302342562|ref|YP_003807091.1| oxygen-independent coproporphyrinogen III oxidase [Desulfarculus
           baarsii DSM 2075]
 gi|301639175|gb|ADK84497.1| oxygen-independent coproporphyrinogen III oxidase [Desulfarculus
           baarsii DSM 2075]
          Length = 385

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 106/373 (28%), Positives = 181/373 (48%), Gaps = 10/373 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             + +  LG+YVH PFC  +CPYCDF +         +   ++ L  +  + ++   R +
Sbjct: 5   PPEPAAGLGLYVHLPFCPGRCPYCDFFAQPF-DAAAAQALARAMLDHLPAVAEMAEGRRL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           ++++ GGGTPS+   + +  +L+ + +   + +N EI++EANP ++     +     GVN
Sbjct: 64  ATVYVGGGTPSMWPVRFLGGLLEAVERTIGLEANPEISLEANPGTLGPAKLRLIAACGVN 123

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+SLG QS +   L+ LGR H   + I  +  AR      +S DLIY LP Q       +
Sbjct: 124 RLSLGAQSFQPALLQALGRRHGPEQTIRVVEQARRAGLKNLSVDLIYGLPGQDAALAVAD 183

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ A++   DHLSLY+LT+   T F + +  G   LP ++    + +      +A  L  
Sbjct: 184 VEAAIALETDHLSLYELTLGPQTPFGRRYVKGRPPLPDDDALAAMEHALLKRLAATPLQR 243

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G +  HN + WR  DY+ +GPGAH  +         +       ++  V  
Sbjct: 244 YEVSNFARPGRQCRHNQDTWRGHDYLALGPGAHGHLAG----RRFAFHADVGRYVSEVAA 299

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGF 367
               +  +E L+++Q+A E  M+GLR  EG+ +     L G +           + ++G+
Sbjct: 300 GRQPLAFEEALTAQQRALELFMLGLRTVEGVDLAAVARLLGADPTGRYGPALAEVVKRGW 359

Query: 368 IERVQFSRLRCTQ 380
                  RLR T 
Sbjct: 360 -ATAHGKRLRPTP 371


>gi|89101068|ref|ZP_01173907.1| coproporphyrinogen III oxidase [Bacillus sp. NRRL B-14911]
 gi|89084211|gb|EAR63373.1| coproporphyrinogen III oxidase [Bacillus sp. NRRL B-14911]
          Length = 356

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 98/353 (27%), Positives = 166/353 (47%), Gaps = 11/353 (3%)

Query: 47  GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
             + ++Q+   EM+   Q        SIF GGGTP+ ++ + + ++   I K+  +    
Sbjct: 7   PVDEYLQALEKEMELTLQDRPSSPFRSIFVGGGTPTALDARQLEMLCASIRKHMPLEEGA 66

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           E T EANP  +  +  +    AGVNR+S GVQ+  E+ L+ +GR H A +  A+I LA+ 
Sbjct: 67  EFTFEANPGDLSEDKLKALYDAGVNRLSFGVQTFNEELLKRIGRTHRAKDVFASIELAKK 126

Query: 167 -IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             F  +S DLIY+LP QT+  ++  L  A +  + H S Y L IE  T+FY + + G L 
Sbjct: 127 TGFSSISVDLIYSLPGQTIADFKETLDTAFTLDIQHYSGYSLIIEPKTVFYNLMRKGKLP 186

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
            P E+    +Y L        G   YEISN +  G ES HNL YW   +Y          
Sbjct: 187 SPGEDAEAAMYELLMERMDLEGFKQYEISNFALPGFESRHNLTYWNNEEYY------GFG 240

Query: 286 VKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                +        +   + +++ + +N   V+E   ++  ++ +E + +GLR  EG+ V
Sbjct: 241 AGAHGYAGGSRNANYGPLKKYMEPLSENKLPVMESHIVTKAERMEEEMFLGLRKTEGVEV 300

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSR--LRCTQRGMTMLDSVIANLA 394
             +      +        L+R   +E ++     +R T++G  + + V  +  
Sbjct: 301 SRFMEKFEEDPLQLFRSELERLQTLELIEAGGKSIRLTRKGRLLGNEVFQSFI 353


>gi|115374326|ref|ZP_01461610.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stigmatella aurantiaca DW4/3-1]
 gi|310818994|ref|YP_003951352.1| oxygen-independent coproporphyrinogen III oxidase [Stigmatella
           aurantiaca DW4/3-1]
 gi|115368636|gb|EAU67587.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stigmatella aurantiaca DW4/3-1]
 gi|309392066|gb|ADO69525.1| oxygen-independent coproporphyrinogen III oxidase [Stigmatella
           aurantiaca DW4/3-1]
          Length = 401

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 137/394 (34%), Positives = 209/394 (53%), Gaps = 14/394 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--- 68
           TG  +   G+Y+H+P+C+ KCPYCDF   V R +V +E +  + L E+      T     
Sbjct: 11  TGMPAARFGLYLHFPYCLAKCPYCDFAVAVAR-QVPEERYAHAVLAELDARLAATPELRE 69

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R + S+F GGGTPSL  P+ +A +L+GIA    V    E+++EANP + +   F GY+ A
Sbjct: 70  RPLESLFLGGGTPSLWHPRWVAQVLEGIAARMKVVPGAEVSLEANPEAADAERFAGYQAA 129

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           GVNR+SLGVQS + ++L+ LGR H+A+    A     R  F  +S D IY    QT  Q 
Sbjct: 130 GVNRLSLGVQSFQPETLKALGRAHDAAGVEAAFRAARRAKFASVSMDFIYGAHGQTRAQV 189

Query: 188 EMELQRALSYAVDHLSLYQLTIE-----KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           E + ++A++   +HLS Y LT+E     + T   K    G++ LP ++  VD+    + +
Sbjct: 190 EADARQAVALEPEHLSTYALTLEREALAEDTPLAKRLARGEVALPPDDEVVDMAATLREV 249

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +AHGLH YEISNH+  G  S HN  YW  G+Y+ +G GA   + V S    +++ +  E
Sbjct: 250 YAAHGLHRYEISNHARPGYSSRHNTLYWTGGEYLALGVGATGMLHVPSPHRYVNL-RSTE 308

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ER 360
           ++L+   +       +E LS E    E L MGLRLR G++ +      G+          
Sbjct: 309 AYLRAAEQGLLPEASREALSREDLFAERLSMGLRLRSGVAWEALCEAYGQEAQPRRGEVA 368

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L + G    ++ +RL  T  G  +  ++ A L 
Sbjct: 369 RLVQHGL-ALLRGNRLVLTDVGADLHSAICAKLL 401


>gi|78044379|ref|YP_359272.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996494|gb|ABB15393.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 376

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 192/379 (50%), Gaps = 15/379 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+KKC YC F S       G  +++     E++W +    P  + +I+ GGG
Sbjct: 9   ALYLHMPFCLKKCHYCAFTSFPAPAGEGVFSYLSLIKKELEWRKDFLAP--LKTIYVGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  + + I+   +    +E T+EANP ++     +  +  GVNR+SLG QS
Sbjct: 67  TPTSLSLNALEKLGEIISPYIS-DKLLEFTVEANPGTLNREKIRLLKDLGVNRVSLGAQS 125

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L  +GR H A++ + A +L R      ++ DLI   P +    +   ++ A+S  
Sbjct: 126 FNDEILLKMGRAHTAAQTLEAYNLLREEGINNLNLDLIIGYP-EGRESFINTVKTAISLK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+SLY L +E+ T  Y+    G+++LP E+  V  +    ++   +G   YEI+N + 
Sbjct: 185 PEHISLYDLKVEENTRLYEEVAKGEIILPEEDEVVLYWEEAINLLEENGYERYEIANFAR 244

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               S HNL YW    Y+GIG  AHS+V +       ++ +    + +M+    +    +
Sbjct: 245 NQQYSRHNLTYWENKPYLGIGLAAHSKVGLYRFWNPNTMLE----YREMLLTGKNY--GE 298

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR 375
           E L+ E+ A E +++ LRL+ G+++++++    R+   E     +     G +  ++  R
Sbjct: 299 EKLTLEEDAKEEIILRLRLKTGLNLQEFQKKYRRDFMAEFGDKIQKFIELGLL-FLEDDR 357

Query: 376 LRCTQRGMTMLDSVIANLA 394
           L  T++G  + ++V+    
Sbjct: 358 LFLTRKGSFVANTVLIEFI 376


>gi|91224951|ref|ZP_01260210.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
 gi|91190197|gb|EAS76467.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
          Length = 463

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 170/411 (41%), Gaps = 29/411 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  ++  + + +T SS+ EI+IE +P  +E+    
Sbjct: 104 ALLASRTVTQLHFGGGTPTFLSEKQITRVMSLLRQEFTFSSDAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQQLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDDDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V ++ HA+ +   L ++      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNESRHALWKGVSLDADDLLRREVIKQLICNFKLDKKAIESEF 398

Query: 351 GRNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVIANL 393
               D   + +L   G ++         V  + +R T RG  ++ ++  + 
Sbjct: 399 SVQFDQYFKEDL---GLLQTFINDQLVEVDDNEIRVTLRGRLLIRNICMSF 446


>gi|86141894|ref|ZP_01060418.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leeuwenhoekiella blandensis MED217]
 gi|85831457|gb|EAQ49913.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leeuwenhoekiella blandensis MED217]
          Length = 337

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 7/330 (2%)

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P  + +I+FGGGTPSL++ +++  I   I  ++ V+   EIT+EANP  +     +   +
Sbjct: 9   PGPLQTIYFGGGTPSLLDAEDLQQIFKTIDSHFEVTEAPEITLEANPDDLTEAKLKMLAE 68

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           + +NR+S+GVQS  E+ L+ + R H+A EA+A + LA+  F  +S DLIY +P  +  +W
Sbjct: 69  SRINRLSIGVQSFFEEDLKLMNRAHDAGEALACLLLAKQYFDNISIDLIYGMPDMSDARW 128

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L +A++  + H+S Y LT+E  T   K  + G +    + VA   + +  +     G
Sbjct: 129 QENLDQAIALDIPHISSYALTVEPNTALQKFIEKGVVKPMDDAVAQKHFEILLAHMEKAG 188

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE SN    G  S +N  YW    Y+GIGP AHS           +  K    ++K 
Sbjct: 189 FENYEFSNFGKPGYFSQNNTAYWTGKPYLGIGPSAHSFDGNTRSWNINNNPK----YIKA 244

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--Q 365
           +  N   + E+E LS+  + +E++M GLR   GIS++  E   G        +  Q+  +
Sbjct: 245 IEANVLPI-ERENLSTTDKYNEYVMTGLRTIWGISLEKIEQDFGLKFKEYALQQAQKHIE 303

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +  +   R+  T++G  + D + ++L +
Sbjct: 304 EHLLFLDDHRIVVTKKGKFLSDGLASDLFL 333


>gi|237740281|ref|ZP_04570762.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422298|gb|EEO37345.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 367

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 107/377 (28%), Positives = 191/377 (50%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    +         +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGTDNQIEKYVNYLLKEIDIYSKNYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL      ++   N EITIE NP +V++N  + YR  G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLKRILS----RFSYDENTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +++L+ LGR HN+ EAI   ++AR   F  +S D++++LP QT+   +++L++ +    
Sbjct: 123 NDENLKVLGRIHNSEEAIEVYNIAREVGFKNISLDIMFSLPNQTLKMLKVDLEKLILLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L     ++   +Y        + G   YEISN S  
Sbjct: 183 EHISIYSLIWEEGTKFFRDLKAGKLKETDNDLEATMYEYIIDYLKSKGYEHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             E+ HN  YW   +Y+G+G  A   +    ++       H + +   + KN   + E+E
Sbjct: 243 DFEARHNSIYWENKNYLGLGLSAAGYLGNLRYKNFF----HLKDYYDKLDKNILPIDERE 298

Query: 320 FLSSEQQADEFLMMGLRLREG--ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L++        ++G RL     I  K++               L+++ ++ + +   + 
Sbjct: 299 ELTANDIEQYRYLVGFRLLNKPLIPSKEYLEKC---------EILEKEAYLVKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ + +  IAN  
Sbjct: 349 LSSKGLMLFNDFIANFI 365


>gi|301346551|ref|ZP_07227292.1| Oxygen-independent coproporphyrinogen III oxidase-like protein yggW
           [Acinetobacter baumannii AB056]
          Length = 351

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 192/350 (54%), Gaps = 12/350 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ++ ++++ + + +   +L   RSI S+F GGGTPSLI  +  A + + +        + E
Sbjct: 11  EQTYLKALVADFETQVELAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCE 70

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP ++E + F GY +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR  
Sbjct: 71  ITLEANPGTLEHDPFAGYLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQA 130

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F R++ DL++ LP+QT+ Q   +L+ A+     H+S YQLTIE  T+F++       VL
Sbjct: 131 GFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGATHISWYQLTIEPNTVFFR----TQPVL 186

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P + V  D+    ++   A+G   YE+S        S HNLNYW++GDY+ IG GAH +V
Sbjct: 187 PQDEVLEDIQEQGEAYLKANGFINYEVSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHGKV 245

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       + P+ +L  V      + + E   +++   EF+M  LRL +G+  + +
Sbjct: 246 TRPDGVYRFQKTRLPKDYLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELY 302

Query: 347 EMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           E+  G +L+   +   +L+ +  +      RL CT++G   L+SV+    
Sbjct: 303 ELRTGLSLNDLNDVLTSLRSRKLLVE-DSGRLACTEQGHIFLNSVLEEFL 351


>gi|331675326|ref|ZP_08376076.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA280]
 gi|331067386|gb|EGI38791.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA280]
          Length = 459

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|307565294|ref|ZP_07627787.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella amnii CRIS 21A-A]
 gi|307345963|gb|EFN91307.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella amnii CRIS 21A-A]
          Length = 381

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 191/389 (49%), Gaps = 26/389 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRY-------KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G+Y+H PFC  +C YC F S + +        K  ++ +I +   EM   + +     ++
Sbjct: 3   GLYIHIPFCESRCIYCGFYSSLTQNVNKIEHGKTIRQRYINAVCKEMSKHKAI-----LN 57

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV------EITIEANPSSVEVNNFQGYR 126
           +I+ GGGTPS + P+ +  I + I K +     V      EITIE NP  V  N  Q   
Sbjct: 58  TIYLGGGTPSQLSPEELNQIFNQINKTFLQQPEVRPSLPKEITIECNPEDVTPNFVQALS 117

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMT 185
              VNRIS+GVQ+  ++ L+F+ R H++++ + A+ L RNI    +S DL++  PKQT  
Sbjct: 118 TLPVNRISMGVQTFNDERLKFIHRRHSSNKILEAVRLLRNIGINNISIDLMFGFPKQTQE 177

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +W  ++++A+S  V+H+S Y L  E+GT  Y M K   +    E    ++Y         
Sbjct: 178 EWIDDIKKAISLNVEHISAYSLMYEEGTPLYAMLKHHKITQIGEEQYRNMYEELIDRLEI 237

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
            G   YEISN +  G  SLHN +YW    YIG+G  AHS            I K    ++
Sbjct: 238 AGYEQYEISNFAKHGFRSLHNSSYWHNVPYIGVGAAAHSYNLRCRRWNYADINK----YV 293

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
             +  + HA  E+E +      ++ ++  LR +EG+++  ++    +   +         
Sbjct: 294 NAIEHDYHAY-EEEIIDDNTHYNDSIVTALRTKEGLNIDGFDEKY-KTYFLTNAAPYIEN 351

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G + +   +    T++G+ + D+++ +L 
Sbjct: 352 GNMGKHDNNYF-ITRKGLYISDAIMTDLI 379


>gi|238797624|ref|ZP_04641120.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           mollaretii ATCC 43969]
 gi|238718488|gb|EEQ10308.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           mollaretii ATCC 43969]
          Length = 459

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLENEIRQRAA 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ +++ + +++      E +IE +P  +E++    
Sbjct: 101 LFAGRQVSQMHWGGGTPTYLNKTQISHLMNLLREHFDFLPGAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T    
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQRLDILQHTIRFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 280 TESGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGESDLLGLGVSAISMLGDSYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  +++   V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 340 QN----EKDLKTYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHYG 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D E     ++ G +ER +   +R T RG  ++ ++ 
Sbjct: 396 IHFADYFAEDFELLAPFEQDGLVERNEKG-IRVTPRGRLLIRNIC 439


>gi|238794560|ref|ZP_04638168.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           intermedia ATCC 29909]
 gi|238726140|gb|EEQ17686.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           intermedia ATCC 29909]
          Length = 459

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 167/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 41  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEICQRAT 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R +S + +GGGTP+ +  + I  +++ +  N+      E +IE +P  +E++    
Sbjct: 101 FFAGRQVSQMHWGGGTPTYLNKKQITHLMNLLRDNFDFLPGAEQSIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQRLDILQHTISFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 280 TESGYQFIGMDHFARPDDELAIAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMLGDSYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  +++   V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 340 QN----EKDLKTYYACVEQRGNALWRGLAMTEDDCLRRDVIKTLICNFQISYQPIEQQYG 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D E     ++ G +ER     +R T RG  ++ ++ 
Sbjct: 396 IRFADYFAEDFELLAPFEQDGLVERDDKG-IRVTPRGRLLIRNIC 439


>gi|187736591|ref|YP_001878703.1| oxygen-independent coproporphyrinogen III oxidase [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187426643|gb|ACD05922.1| oxygen-independent coproporphyrinogen III oxidase [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 369

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 189/380 (49%), Gaps = 15/380 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---ISSIF 75
           + +YVH PFC + CPYC F  H        ++FI++   E +              ++++
Sbjct: 1   MHLYVHIPFCHRICPYCAFFKHTP-ASTDMKSFIRALGREAESRAAALATNRGGETATLY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS++   ++   ++ + +   V    E + EANP++      + +R  G+ R+SL
Sbjct: 60  FGGGTPSMLSDTHLGHFMETLDRLVPVDKLDEFSFEANPATFTEKKVRFWRSLGMTRVSL 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQSL+   L  LGR H  ++A+ ++ + +N   P ++ DL++A+P QT++ WE  L+ A
Sbjct: 120 GVQSLDSGILHLLGREHTPAQALHSVEMLKNAGMPHINMDLMFAIPGQTLSIWEATLKEA 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    DH+S Y LT E+ T F++    G+      +     + L + +  A GL  YE S
Sbjct: 180 VRAGTDHISAYNLTYEEDTEFFRSLLRGE-KRQDPDEDAAFFELAEHMLEAAGLRHYETS 238

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G  S HN+ YW+  DY+GIGPGA S +      +  S  +  +++++   +NG  
Sbjct: 239 NYAREGCISPHNMAYWKGEDYVGIGPGAVSTING----IRYSNTRDTDAYIRSTLENGLP 294

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           + E+E ++ E    E + + LR  EG+ +K                  +  G  +     
Sbjct: 295 LSEQEPVTEEDYRLERIALMLRTDEGLPLKYI-----LPESRPLLEQYRELGLADISPEQ 349

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R     RG  ++D++ A L 
Sbjct: 350 RFILKGRGRLLVDAIAAELC 369


>gi|163782966|ref|ZP_02177961.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
 gi|159881646|gb|EDP75155.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
          Length = 375

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 123/377 (32%), Positives = 188/377 (49%), Gaps = 20/377 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KCPYCDF S V R  VG E++    L E +  R L     + +++ GGG
Sbjct: 5   GLYVHIPFCSYKCPYCDFTSLV-RSPVGFEDYTAFLLREAELYRDL--NIRLETLYLGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+ P  I  ++D +   + +S   E+T+E NP +     F+   +AGVNR+SLGVQS
Sbjct: 62  TPTLLSPGQIGALIDELGSIFDLSGLKEVTVECNPETYRFGEFRELLRAGVNRLSLGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L+ LGR H   E++ A   AR+  F  +S D+IY  P Q +   E+EL+      
Sbjct: 122 FSEEGLKRLGREHGVQESLEAYIHARDAGFENVSIDIIYGYPGQRVEDIEIELESIGELN 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y LT  + T        G+L +P E    D+Y+         G   YE+SN + 
Sbjct: 182 PDHVSAYMLTPHENTPMGMKILGGELEIPEEETLGDIYDRLWKGLKGLGYERYEVSNWAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW   +++G+G  A        +       K+  S++K + +    +  +
Sbjct: 242 GGKECKHNLLYWTMEEFLGLGVSAWGFFGGRRYGNT----KNVMSYVKALSEGKKPLQSE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
             L+ E   +E LM+ LRL+ G+  +D E      L  E  R     GF E ++  RL  
Sbjct: 298 VLLNEEDLFEEELMLRLRLKWGLGEEDME------LIPERLR-----GFFE-IKGGRLGI 345

Query: 379 TQRGMTMLDSVIANLAV 395
            +  M + + +I  + +
Sbjct: 346 REEYMLLSNEIITEVLL 362


>gi|56415850|ref|YP_152925.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364780|ref|YP_002144417.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56130107|gb|AAV79613.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197096257|emb|CAR61855.1| oxygen-independent coproporphyrinogen III oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 457

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 175/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-----AESLH--NLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +        A+     + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQCEGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +      L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFAEYFAEDLLLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 437


>gi|301023830|ref|ZP_07187564.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 69-1]
 gi|300396878|gb|EFJ80416.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 69-1]
          Length = 457

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|157373115|ref|YP_001481104.1| coproporphyrinogen III oxidase [Serratia proteamaculans 568]
 gi|157324879|gb|ABV43976.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           proteamaculans 568]
          Length = 457

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFQRAAARYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQTHKADEYLAVLAQEIAQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +  + +GGGTP+ +    I+ ++  + +++    ++E++IE +P  +E++    
Sbjct: 99  LFAGRKVGQLHWGGGTPTYLSKSQISKLVAMLRQHFDFLPDLEMSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQRLVNREQDETFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++        LF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAYTLQRVAELNPDRLSVFNYAHMPN-LFAAQRKIKDADLPSAQQKLDILQQTIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TESGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMLGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   V + GHA+     ++ +      ++  L     +     E    
Sbjct: 338 QN----QKELKTYYSSVEEQGHALWRGLAMTEDDCLRREVIKTLICNFKLDYLAIEQQFA 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++     +R G +ER +   +R T RG  ++ ++ 
Sbjct: 394 IDFAGYFAEDLQLLAPFERDGLVERDEQG-IRVTPRGRLLIRNIC 437


>gi|319788978|ref|YP_004090293.1| oxygen-independent coproporphyrinogen III oxidase [Ruminococcus
           albus 7]
 gi|315450845|gb|ADU24407.1| oxygen-independent coproporphyrinogen III oxidase [Ruminococcus
           albus 7]
          Length = 372

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 183/379 (48%), Gaps = 20/379 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC++KCPYC F S     +     ++++    +   +      S  +++FGGG
Sbjct: 3   GIYVHVPFCLRKCPYCSFYSKPYDAETA-SRYVEAICRNIAAYQ--GRGISADTLYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++ + + +I++   K +++  N EIT+EANP SV+    +GYR AGVNRIS G+QS
Sbjct: 60  TPSLLDTKQVEMIVNECCKAFSL-DNAEITLEANPCSVDEEKLRGYRAAGVNRISFGIQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L FLGR H+  +A+ A+  A N  F  +S D++     +     +  +    +  
Sbjct: 119 ADDKRLGFLGRLHDYGKAVEAVENAVNAGFENISADIMLGAAGEDTESLKKTIDSICAMP 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y L IE+GT F         ++  +++  DLY         HG   YEISN   
Sbjct: 179 VRHISSYMLKIEEGTAFDN--DKTKSLIADDDLMSDLYLTAVESFEKHGFRQYEISNFCM 236

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   DY+G G  AHS      +      E    + L+       +V   
Sbjct: 237 EGYESRHNNKYWTGEDYLGFGAAAHSFFDGVRYFCPPDTEAFINAPLQPREVTEQSV--- 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQRQGFIERVQFSR 375
                  + +E++++GLRL +GI +       G    +      +   R G     +   
Sbjct: 294 ------DRGEEYILLGLRLCKGIMLDRIAGYFGSTSADRFSVLAKEYARHGL-AVFENGV 346

Query: 376 LRCTQRGMTMLDSVIANLA 394
           LR T +G  + + +I+ L 
Sbjct: 347 LRLTPKGFLVSNGIISQLI 365


>gi|269964585|ref|ZP_06178824.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           alginolyticus 40B]
 gi|269830712|gb|EEZ84932.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           alginolyticus 40B]
          Length = 463

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 173/409 (42%), Gaps = 25/409 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  ++  + + +T SS+ EI+IE +P  +E+    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMSLLRQEFTFSSDAEISIEVDPREIELTMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    +A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKESFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFALPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK----DW 346
            +     +K  + +   V +  HA+ +   L S+      ++  L     +  K    ++
Sbjct: 343 AQN----QKELKKYYAQVNELRHALWKGVSLDSDDLLRREVIKQLICNFKLDKKAVESEF 398

Query: 347 EMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++   +    D++  +       +E V  + +R T RG  ++ ++  + 
Sbjct: 399 KVRFEQYFKEDLQLLQTFINDELVE-VDDNEIRVTLRGRLLIRNICMSF 446


>gi|218707492|ref|YP_002415011.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293407486|ref|ZP_06651405.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298383229|ref|ZP_06992822.1| oxygen-independent coproporphyrinogen-III oxidase [Escherichia coli
           FVEC1302]
 gi|300896909|ref|ZP_07115395.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 198-1]
 gi|218434589|emb|CAR15518.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli UMN026]
 gi|284923968|emb|CBG37067.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           042]
 gi|291425403|gb|EFE98442.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298276263|gb|EFI17783.1| oxygen-independent coproporphyrinogen-III oxidase [Escherichia coli
           FVEC1302]
 gi|300359262|gb|EFJ75132.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 198-1]
          Length = 457

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDFAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFPDYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|222035579|emb|CAP78324.1| Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           LF82]
 gi|312948436|gb|ADR29263.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 457

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV----KDWE 347
           +     +K  + + + V + G+A+     L+ +      ++  L     +      K W+
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 348 MLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|270265258|ref|ZP_06193520.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera 4Rx13]
 gi|270040892|gb|EFA13994.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera 4Rx13]
          Length = 457

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 166/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+++         L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFQSAAARYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQTHKADEYLAVLAREIAERAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +  + +GGGTP+ +    I+ +   + +++    + E++IE +P  +E++    
Sbjct: 99  LFAGRKVGQMHWGGGTPTYLSKSQISRLTAMLRQHFDFLPDAEMSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLERVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAQQKLDILQQTIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TESGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMLGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   V   G+A+     ++ +      ++  L     +  +  E    
Sbjct: 338 QN----QKELKTYYSSVEAQGNALWRGLTMTEDDCLRREVIKTLICNFQLGYRAIEQQFA 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       +LQ      R G +ER +   +R T RG  ++ ++ 
Sbjct: 394 IDFAAYFAEDLQLLAPFERDGLVERDERG-IRVTPRGRLLIRNIC 437


>gi|281180930|dbj|BAI57260.1| coproporphyrinogen III oxidase [Escherichia coli SE15]
          Length = 457

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|33240834|ref|NP_875776.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33238363|gb|AAQ00429.1| Oxygen independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 416

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 124/406 (30%), Positives = 202/406 (49%), Gaps = 36/406 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGP 68
               Y+H PFC ++C YCDF       + G EN         ++     E+    ++   
Sbjct: 4   PRSAYLHIPFCHRRCFYCDFPVVPLGDRAGTENGPGSSSVKSYLNLLHREISLAPKVA-- 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            S+S+++ GGGTPS++    +A +LD +  ++   +  EI+ E +P+S +  + +G+  A
Sbjct: 62  -SLSTVYIGGGTPSILSADQVANLLDHLRLHFGFQNGAEISFEVDPASFDTFSLEGFLDA 120

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQT 183
           GVNR+SLG QS +++ L  LGR H A++ + A       F        S DLI  LP Q 
Sbjct: 121 GVNRLSLGAQSFDDKVLAQLGRRHTANDLLDACGWINQAFNERKLFSWSLDLIQNLPGQD 180

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  WE +L +AL  +  H+S+Y L+IEKGT+F      G+L LP+E+ A D+  +T    
Sbjct: 181 LCSWEKQLLKALDISPPHMSIYDLSIEKGTVFEWRQNRGELSLPNEDDASDMSKMTSDKL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN++  G  S HN  YW    + G G GA S           + EK+ + 
Sbjct: 241 KQAGFSRYEISNYALPGHASRHNRVYWSGSGWWGFGQGATSCPWGVRSSRPRTREKY-KK 299

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQ---ADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           WL++   +G  + +   L++E Q    DE L+ GLR REGI  K+       + + + E 
Sbjct: 300 WLEVQENDG--LDKSLTLNNEGQLIPLDELLIFGLRRREGIDFKELVSSFNWD-ESQLEI 356

Query: 361 NL----------QRQGFIERVQFSRLRCT-QRGMTMLDSVIANLAV 395
           NL           ++G I++  + R   T   GM + + ++ ++ +
Sbjct: 357 NLNNLKNYWANSLKEGLIKQRGY-RFYLTDPHGMDLSNQILVDMLL 401


>gi|257468457|ref|ZP_05632551.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317062720|ref|ZP_07927205.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688396|gb|EFS25231.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 358

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 205/377 (54%), Gaps = 24/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KC YCDF S  +  K  ++ ++   L EM+           ++++FGGG
Sbjct: 4   GIYIHIPFCLNKCNYCDFLSF-KSDKESRKKYVDYLLKEMELY----PSYKYNTVYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++ ++I  IL+ +     +    E+T+E NP +V+ +     +K G+NR+S+G+QS
Sbjct: 59  TPSLLDLEDIERILEKL----DIEEGAEVTLEVNPKTVDYDKLVQLKKIGINRLSIGIQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ LR LGR H++ E I   + AR   F  +S DL+++LP Q++ + E +L++ LS  
Sbjct: 115 FDEKYLRILGRMHSSEEGIETYYNARKAGFENISLDLMFSLPGQSVEEVENDLKKLLSMK 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H S+Y L  E+GT+F++  K G L      +  D++          G   YEISN S 
Sbjct: 175 PEHFSIYSLIWEEGTVFFEKLKKGLLRETENEIEADMFEKIIDTAEEAGYIHYEISNFSL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E++HN  YW   +Y+GIG GA   +    ++  +   ++ +S    V+     ++EK
Sbjct: 235 PEKEAVHNTKYWENKEYLGIGLGASGYINDIRYKNQMKFLEYYDSIESRVK----PIMEK 290

Query: 319 EFLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           E ++ +++ +   ++G R L++G+  +      G  ++     +L+++G++ + +     
Sbjct: 291 EMVTLKEREEYKYILGFRLLKKGVKPE------GEYIEKCV--SLEKRGYLTK-KGEYFI 341

Query: 378 CTQRGMTMLDSVIANLA 394
            T++G+ + + V+    
Sbjct: 342 LTRKGLMVANDVLDEFI 358


>gi|300714617|ref|YP_003739420.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
           Eb661]
 gi|299060453|emb|CAX57560.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
           Eb661]
          Length = 455

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 94/404 (23%), Positives = 174/404 (43%), Gaps = 24/404 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC + C +C  N  V R +   + ++ +  +E+Q   +
Sbjct: 38  AAFQQAAQRYPDRPLSLYVHIPFCHRLCYFCGCNKLVTRQQHKADAYLDALASEIQSRAK 97

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +  Q I  ++  + + +T S + E++IE +P  +E++    
Sbjct: 98  LFRGRTVSQMHWGGGTPTYLNKQQITRLITLLRQAFTFSEDAELSIEVDPREIELDVLDH 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
              AG NR+S+GVQ   +     + R  +    +  I  AR   F  +S DLIY LP QT
Sbjct: 158 LHAAGFNRLSMGVQDFNKTVQEKVNRVQDEQVIVDLIARARQVGFASVSLDLIYGLPAQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ ++   D LS++        LF    K  +  LP+    +D+   + ++ 
Sbjct: 218 PESFAFTLQKVIALNPDRLSVFNYAHMPA-LFAAQRKIKEADLPNAQQKMDILQQSIAML 276

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 277 TGAGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGMGVSAISMLGDTYA 336

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---EM 348
           +     EK  +SW   V +N  A+     LS++      ++  L     ++  D+   E 
Sbjct: 337 QN----EKELKSWYAAVAENHTALWRGVALSADDCLRRDVIKTLMCNFALNFADFESGER 392

Query: 349 LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                   D+       R G +E  +   L+ T +G  ++ +V 
Sbjct: 393 SFSDYFAEDLALLAPFIRDGLVECHEKG-LQVTAKGRLLVRNVC 435


>gi|315187232|gb|EFU20989.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           thermophila DSM 6578]
          Length = 410

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 118/396 (29%), Positives = 194/396 (48%), Gaps = 9/396 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + +    + G+G   + VYVH PFC ++C YCDF S     +   E +++  L  ++ M 
Sbjct: 7   MESVRAILEGRGGYPVSVYVHVPFCARRCRYCDFFSVAGAGERVMEGYVERVLEVLEQMF 66

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNF 122
            L  P  I +++ GGGTP+++  +    +L G+ +   V    VE T+E NP  V+    
Sbjct: 67  VLLRPSEIPTVYVGGGTPNVLPLRLWERLLTGVRERVRVWGRPVEWTVEVNPEWVDEEKV 126

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +   + GV R+SLGVQ L+E  LR +GR     E   A+ +      R+S DL+   P+ 
Sbjct: 127 RVLGEVGVTRVSLGVQGLDEGFLRLMGRGAGRREVERAVEVLAGWGGRVSVDLLAGRPRG 186

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                  EL+    + V H+S+Y LT+E+GT+   M + G++V+P E      +      
Sbjct: 187 MSGDVVRELEEVRGWGVGHVSVYGLTVEEGTVLGAMVRRGEVVMPGEEELAGEWEAICRW 246

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
               G   YE+SN +  G E LHNL YWR   Y+G+GP A S +      V +   +   
Sbjct: 247 FGERGFVRYEVSNFALPGEECLHNLRYWRLEPYLGVGPSAVSTLPGKEGPVRVRQVRDVG 306

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECE 359
            +   V + G    E E +  +    E+ MMGLR REG+  + +  + G  ++    E  
Sbjct: 307 RF---VAEGG-VWEEVEVIGPQAFLLEWFMMGLRTREGVEGERFRRVWGVGVEEVLGEVG 362

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           R     G  E  +   +R ++ G+ +LDS++ ++A+
Sbjct: 363 RRWCGWGVAEMGESG-VRLSEHGLDILDSLLKDIAI 397


>gi|226501602|ref|NP_001152192.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           sll1917 [Zea mays]
 gi|195653683|gb|ACG46309.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           sll1917 [Zea mays]
          Length = 475

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 110/412 (26%), Positives = 186/412 (45%), Gaps = 44/412 (10%)

Query: 22  YVHWPFCVKKCPYCDFN-------SHVRRYKVGQE----NFIQSFLTEMQWMRQL-TGPR 69
           YVH PFC K+C YCDF        S   R +  ++    +++   L E+   R +     
Sbjct: 58  YVHLPFCRKRCHYCDFPIIALGSSSAPSRGEAAEDPRIVDYVNLLLREVSATRPVSDDGV 117

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + ++FFGGGTPSL+ P+ +A +LD +   + +S+  E++IE +P + +    +     G
Sbjct: 118 PLETVFFGGGTPSLVPPRLVATVLDALRARFGLSARPEVSIEMDPGTFDAARLKELVGVG 177

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQW 187
           VNR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT   W
Sbjct: 178 VNRVSLGVQAFQEDLLRACGRAHGVKEVHEAVAIVTACEGLQNWSMDLISSLPNQTEEMW 237

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L+  +     H+S+Y L IE+GT F +M+  G   LPS+  + + Y +     S  G
Sbjct: 238 EESLRCTVDARPTHVSVYDLQIEQGTKFGQMYTPGVFPLPSDTESANFYRIASKRLSEAG 297

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEIS++   G E  HNL YW+   +   G G+ S +    +       K    W++ 
Sbjct: 298 YNHYEISSYCKPGYECKHNLTYWQNRPFYAFGLGSASYINGVRYS-RPRRTKEYAEWVQK 356

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQR 364
           + ++G    E      +  A + +M+ LR    + ++ +    G++L +      +    
Sbjct: 357 L-EDGTWRHESRSSDLKDMALDVVMLSLRTAWVLDLQSFSKSFGKSLALSLCNTFKPFVE 415

Query: 365 QGFIERVQFSR------------------------LRCT-QRGMTMLDSVIA 391
            G +  +   R                        +R +   G  + + +I+
Sbjct: 416 SGHVIAMDMDRQALPHTDFELDLQNEDGFGSRIAFIRLSDPDGFLLSNELIS 467


>gi|308798795|ref|XP_003074177.1| coproporphyrinogen III oxidase (ISS) [Ostreococcus tauri]
 gi|116000349|emb|CAL50029.1| coproporphyrinogen III oxidase (ISS) [Ostreococcus tauri]
          Length = 458

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 188/420 (44%), Gaps = 27/420 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV----RRYKVGQENFIQSFL 56
           ++  SA    +          YVH PFC  +C YCDF   V         G   + ++  
Sbjct: 30  VRSFSADRAKLPASTRAPTSAYVHLPFCRSRCYYCDFAISVIGTRTDASEGMRAYAEAVT 89

Query: 57  T-------EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
                    M+     +G + + +IFFGGGTPSL+    +  IL  + + + ++S  EI+
Sbjct: 90  RETRATATRMRERYGASGIKPLETIFFGGGTPSLVPVDVLGEILGTLRREFGIASGAEIS 149

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF- 168
            E +P +   +  +G+   GVNR+SLGVQS +++ L+  GR+H+  EA  AI + R+   
Sbjct: 150 AEMDPGTFNEDKLRGFLDLGVNRVSLGVQSFDDEVLKRAGRSHDVREAELAIEMLRSCGV 209

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG------ 222
           PR S DLI  LP      W   L R +    DH+S+Y L +EKGT FY+ + +       
Sbjct: 210 PRWSVDLIGGLPGVDAKTWRASLDRVIESGADHVSVYDLQVEKGTAFYRWYGENAKEDGS 269

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
              LPSE+ + D +    +   A G   YE+S+++  GA   HN  YW+ G + G G  A
Sbjct: 270 RPALPSEDASADAFREASAALRAAGYEHYEVSSYAKPGARCKHNQIYWQNGGWYGFGMSA 329

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            S V          + ++  +++  + K     V            E LM+ LR  +G+ 
Sbjct: 330 TSHVDGERMARPRKMNEYY-AYVNALEKGEDVGVISTGGDGSDALFEHLMLRLRTSDGLD 388

Query: 343 VKDWEMLAGRNLDIE---CERNLQRQGFI----ERVQFSRLRCT-QRGMTMLDSVIANLA 394
           ++D     G ++  E     +       +    +R   S L  T   G+ M   V++ L 
Sbjct: 389 LEDVTERFGASVVDEIHDAIKPFVPDYAVYGVNDRGHRSSLHLTDPEGLMMSTEVLSTLI 448


>gi|95931200|ref|ZP_01313922.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfuromonas acetoxidans DSM 684]
 gi|95132762|gb|EAT14439.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfuromonas acetoxidans DSM 684]
          Length = 386

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 174/348 (50%), Gaps = 3/348 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC +KCPYCDF S V R       ++ +   +++      G    S++FFGGG
Sbjct: 12  GLYIHIPFCRQKCPYCDFYSEVDRDGDLV-LYVDALCRDLELSCAWYGAEPFSTVFFGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+ P  +  IL+ + + + +S++VE+++E NP +V+     GY +AGVNR+S+GVQS
Sbjct: 71  TPSLLPPDQVERILNQVQRFYGLSADVEVSMEVNPGTVDCQGLHGYHQAGVNRLSIGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  LR+L R H++ +A+A +  AR   F R++ DL++ALP Q+        +R     
Sbjct: 131 FDDDQLRWLRRIHDSRQALALVDEARRAGFERLNLDLMFALPGQSEASMVESCRRIAQLD 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+++Y L++E GT        G      E      Y         HG   YEISN   
Sbjct: 191 VEHVAIYGLSVEPGTPLAAAEASGRWSQSDEADYQRHYLTLSEQLIRHGFDHYEISNFCR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HNL YW+   Y+GIG GAHS +  G             ++L+ ++       + 
Sbjct: 251 PGEACRHNLGYWQRRPYLGIGAGAHSFLGQGDGE-RWHCPDDLNAYLRALQHGQLPRQQL 309

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           E  S  Q   E   + LR  +G+  +++ +  G          +   G
Sbjct: 310 ETFSHGQAVSEAAYLALRCGKGVDDQEFLLRYGVRFSSRFSDAIAACG 357


>gi|293413301|ref|ZP_06655962.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B354]
 gi|291468049|gb|EFF10547.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B354]
          Length = 457

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PKSFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|254422388|ref|ZP_05036106.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. PCC 7335]
 gi|196189877|gb|EDX84841.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. PCC 7335]
          Length = 419

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 124/407 (30%), Positives = 197/407 (48%), Gaps = 37/407 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG------QENFIQSFLTEMQWMRQLTGPRSISS 73
             Y+H PFC ++C YCDF   V   K           + ++ L E+     +   R + +
Sbjct: 4   SAYIHIPFCRRRCFYCDFAITVIGEKKRGDTSNTMATYTRTLLKEIAAT-PIYDKRPLKT 62

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+    +  IL  IA  + ++ N EIT+E +P++ ++++ +GY+ AGVNR+
Sbjct: 63  VFFGGGTPSLLSVTQVEEILAAIAHRFGIAPNAEITMEMDPATFDLDHIRGYKSAGVNRV 122

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+ +++ L   GR H   +   A+ L R       S DLI  LP Q M  W+  L 
Sbjct: 123 SLGVQAFKDELLAAAGRFHRREDIFHAVELLRQAGIENFSLDLILGLPYQVMKDWQAALI 182

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++    HLS+Y L +E  T F + +  G   LPS+++ V++Y + +S+ SA+G   YE
Sbjct: 183 EAITLGPKHLSIYDLIVEPQTAFSRYYISGQAPLPSDHLTVEMYRVARSVLSANGYEHYE 242

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           I N++     S HNL YWR     G G GA S +         + +++ + W+    +NG
Sbjct: 243 ICNYAKPSYASQHNLTYWRCQQNYGFGMGATSYLNHQRIDRPRTQQRY-QVWVDAFIQNG 301

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQ----- 363
               +   +  E+Q  E +MMGLRL  GI++     + G    + L      +LQ     
Sbjct: 302 GRTAD-PVIDPEEQVVESIMMGLRLPAGIALGGVHQIYGEKGLQALGKAIAPHLQNGWLT 360

Query: 364 -----------RQGFIERVQFSRLRCTQR-------GMTMLDSVIAN 392
                          ++     +LR T R       G  M + VI +
Sbjct: 361 IKSASVESASVESALLDDSNAIKLRPTDRIQLSDPEGFLMSNVVITD 407


>gi|260857735|ref|YP_003231626.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O26:H11 str. 11368]
 gi|257756384|dbj|BAI27886.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O26:H11 str. 11368]
          Length = 457

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 174/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E L  
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKLWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|238790753|ref|ZP_04634513.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           frederiksenii ATCC 33641]
 gi|238721151|gb|EEQ12831.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           frederiksenii ATCC 33641]
          Length = 457

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 172/406 (42%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAV 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R +    D LS++       +LF    K  D  LP+    +D+   T S  
Sbjct: 219 AESFAFTLKRVVELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTISFL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TESGYQFIGMDHFARPDDELAVAQRDGKLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  +++  +V + G+A+     ++ +      ++  L     IS +  E   
Sbjct: 337 AQN----EKDLKTYYAVVEQRGNALWRGLTMTEDDCLRRDVIKTLICNFQISYQPIEQHY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D E     ++ G ++R     +R T RG  ++ ++ 
Sbjct: 393 GIRFADYFAEDFELLAPFEQDGLVDRDDKG-IRVTPRGRLLIRNIC 437


>gi|307718820|ref|YP_003874352.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           thermophila DSM 6192]
 gi|306532545|gb|ADN02079.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Spirochaeta thermophila DSM 6192]
          Length = 410

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 119/396 (30%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + A    + G+G   + VYVH PFC ++C YCDF S         E +++  L  ++ M 
Sbjct: 7   MEAVRAILEGRGGYPVSVYVHVPFCARRCRYCDFFSVAGAGVRVMEGYVERVLEVLEQML 66

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNF 122
            L  P  I +++ GGGTP+++  +    +L GI +   V    VE T+E NP  V+    
Sbjct: 67  ALLRPSEIPTVYVGGGTPNVLPLRLWERLLKGIRERVEVWGRPVEWTVEVNPEWVDEEKV 126

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           +   + GV R+SLGVQ L+E  LR +GR     E   A+ +      R+S DL+   P+ 
Sbjct: 127 EVLGEGGVTRVSLGVQGLDEGFLRLMGRGAGRREVERAVEVLAGWGGRVSVDLLAGRPRG 186

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                  EL+    +   H+S+Y LT+E+GT+   M + G++V+P E      +      
Sbjct: 187 MSGDVVRELEEVSGWGAGHVSVYGLTVEEGTVLGAMVRRGEVVMPDEEELAGEWEAICRW 246

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
               G   YE+SN +  G E LHNL YWR   Y+G+GP A S +      V +   +   
Sbjct: 247 FGERGFVRYEVSNFALPGEECLHNLRYWRLEPYLGVGPSAVSTLPGKEGPVRVRQVRDVG 306

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECE 359
            +   V + G    E E +  +    E+ MMGLR REG+  + +  + G  ++    E  
Sbjct: 307 RF---VAEGG-VWEEVEVIGPQAFLLEWFMMGLRTREGVEGERFRRVWGVGVEEVLGEVG 362

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           R     G  E  +   +R ++ G+ +LDS++  L +
Sbjct: 363 RRWCGWGAAEMGESG-IRLSEHGLDILDSLLKALPI 397


>gi|323964214|gb|EGB59697.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M863]
 gi|327250495|gb|EGE62203.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           STEC_7v]
          Length = 457

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|294782617|ref|ZP_06747943.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481258|gb|EFG29033.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
          Length = 367

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 187/377 (49%), Gaps = 23/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    +         +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGTDNQIEKYVNYLLKEIDIYSKNYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V++N  + YR  G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLKRILSKFSY----DENTEITIEVNPKTVDINKLKEYRNLGINRLSIGIQTF 122

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++L+ LGR HN+ EAI   ++AR   F  +S D++++LP QT+   +++L++ +    
Sbjct: 123 NNENLKILGRIHNSEEAIEVYNMAREVGFKNISLDIMFSLPNQTLEMLKIDLEKLILLNP 182

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S+Y L  E+GT F++  K G L      +   +Y        + G   YEISN S  
Sbjct: 183 EHISIYSLIWEEGTKFFRDLKAGKLKETDNELEATMYEYIIDYLKSKGYGHYEISNFSKK 242

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             E+ HN  YW   +Y+G+G  A   +    ++       H + +   + KN   V EKE
Sbjct: 243 DFEARHNSIYWENKNYLGLGLSAAGYLGNLRYKNFF----HLKDYYDKLDKNVLPVDEKE 298

Query: 320 FLSSEQQADEFLMMGLRLREG--ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            L+         ++G RL     I  K++               L+++ ++ + +   + 
Sbjct: 299 VLTEADIEQYRYLVGFRLLNNPLIPSKEYLEKC---------EILEKEAYLVKKENGYI- 348

Query: 378 CTQRGMTMLDSVIANLA 394
            + +G+ + +  IAN  
Sbjct: 349 LSSKGLMLFNDFIANFI 365


>gi|91213413|ref|YP_543399.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117626140|ref|YP_859463.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|237702897|ref|ZP_04533378.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           3_2_53FAA]
 gi|331649711|ref|ZP_08350791.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M605]
 gi|91074987|gb|ABE09868.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           UTI89]
 gi|115515264|gb|ABJ03339.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           APEC O1]
 gi|226902834|gb|EEH89093.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia sp.
           3_2_53FAA]
 gi|331041344|gb|EGI13494.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M605]
          Length = 459

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 395

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|26111062|gb|AAN83245.1|AE016770_45 Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           CFT073]
          Length = 459

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWD 395

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|328951197|ref|YP_004368532.1| oxygen-independent coproporphyrinogen III oxidase [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451521|gb|AEB12422.1| oxygen-independent coproporphyrinogen III oxidase [Marinithermus
           hydrothermalis DSM 14884]
          Length = 370

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 123/379 (32%), Positives = 182/379 (48%), Gaps = 25/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   CPYCDF+  VRR++   E ++     E Q +     P  + +++FGGG
Sbjct: 6   SLYVHVPFCPTICPYCDFH-VVRRHRGVVEAYLHRLAEEAQALYAHH-PDPLDTLYFGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  +    +   +   W ++   E+T+EANP +++    +  +  GVNRIS+GVQS
Sbjct: 64  TPSFLRDREFEALFAALP--WRLAPRAEVTLEANPGTLDPARLEHLKALGVNRISIGVQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L+ LGR H    A  A+ LA+    R+S DLI  LP Q       +L+ A+   V
Sbjct: 122 FQDPVLKTLGRAHGRKGAFRAVELAQEAGLRVSIDLILGLPGQ---DVAADLREAVQLEV 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L IE GT F         + P            ++I    GL  YE+SN +  
Sbjct: 179 GHVSAYTLQIEPGTPFAVR-----GLEPDPEREAAALEQAEAILGEAGLVRYEVSNFARP 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGS--HRVAISIEKHPESWLKMVRKNGHAVVE 317
           G E+ HN  YWR G +  +GP A       +  + V  +    P  WL      G    +
Sbjct: 234 GEEARHNQVYWRAGFWAALGPAAAGHYPAANEAYSVRTTNPPLP-RWLA-----GEPP-Q 286

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFS 374
           +E +   + A E LM+GLR REG+ ++  E   G  L    E     L+  G +E  +  
Sbjct: 287 REAIPPLEHAKEALMLGLRTREGVDLEALEARTGLMLWPALEPIAARLEAAGLLEVAE-R 345

Query: 375 RLRCTQRGMTMLDSVIANL 393
           RLR T+ G+  L  VI  L
Sbjct: 346 RLRPTRAGLMRLHPVILAL 364


>gi|170769624|ref|ZP_02904077.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia
           albertii TW07627]
 gi|170121432|gb|EDS90363.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia
           albertii TW07627]
          Length = 457

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIIHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  + + EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNVDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A +H AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLHHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFSFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKRYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPVEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVSEKG-IQVTAKGRLLIRNIC 437


>gi|86156670|ref|YP_463455.1| coproporphyrinogen III oxidase, anaerobic [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773181|gb|ABC80018.1| coproporphyrinogen III oxidase, anaerobic [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 379

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 182/384 (47%), Gaps = 12/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVH+P+C  +CPYCDF +       G   + ++   E+          ++ S++
Sbjct: 2   ARPFGVYVHYPYCTHRCPYCDF-AVTTERPPGAGRYARAVRAELGLRAAAFEGLALRSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL + + I  +LD I   + +++  E+T+E NP S +    + +R AGVNRIS+
Sbjct: 61  LGGGTPSLWDAEEIRDVLDAIRGRFGLAAEAEVTLEVNPESSDPARLEAWRAAGVNRISV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +   L  LGR H    A  AI  A      +S DLIY   + ++     + +RA+
Sbjct: 121 GVQSFDPGVLAKLGRRHGPERAERAIREASAAIGNVSVDLIYGARRSSVETARRDAERAV 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                H+S Y LT+E   +       +M ++G L LPS+   +      ++     GL  
Sbjct: 181 EAGAAHVSAYALTLEPDVMAEEVPLARMRREGRLPLPSDEDTLAQAAALRAALRRLGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES+HN  YWR+  Y+G+G GA+   +  +  V     +   +WL  V  
Sbjct: 241 YEISNFARPGRESVHNGLYWRHESYLGLGAGAYGCRRGEAGSVRYGNLRDAGAWLAAVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                 E++ + +    +E LM+ LR REG  +                 +L R     R
Sbjct: 301 GRLPTAEEDRIDARADRNERLMLALRTREGAPLAALG-----PAQAREAADLVRHRLAVR 355

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
              + L  T+RG+ +  ++   L 
Sbjct: 356 RDGA-LVLTRRGLDLHSAISERLF 378


>gi|312879933|ref|ZP_07739733.1| oxygen-independent coproporphyrinogen III oxidase [Aminomonas
           paucivorans DSM 12260]
 gi|310783224|gb|EFQ23622.1| oxygen-independent coproporphyrinogen III oxidase [Aminomonas
           paucivorans DSM 12260]
          Length = 376

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 113/382 (29%), Positives = 182/382 (47%), Gaps = 11/382 (2%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            G   L +YVH PFC  KCPYC F S     +  ++ +++    E+++       R +SS
Sbjct: 5   DGRGPLALYVHVPFCTAKCPYCAFPS-APPGEGDEDRYLEGIGREVRFWASRLKRRGLSS 63

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ + P     ++  + + ++  S+ EIT+EANP S+   + + + +    R+
Sbjct: 64  LYVGGGTPTRLSPSGWERLIRFLEEAFSFRSSTEITVEANPESLSPEHLEIWGRWRPLRV 123

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS  ++ L  LGR H+ + A  A    R     +  DL++ +P+QT+  +   L+ 
Sbjct: 124 SLGVQSFRDEELVALGRLHDGARAREAAMRIRRQGIPLGLDLMFGIPRQTLRTFAESLRE 183

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ALS   +HLSLYQL +E+GT F +   +G             Y   Q      G   YE+
Sbjct: 184 ALSLDPEHLSLYQLMLEEGTPFGESPPEG-----RAEEGYPFYRYAQWRLPRAGYGQYEV 238

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           ++ +  G    HNL YW  GD++G+GPGA   +    +R   ++      W     +   
Sbjct: 239 ASFALSGRWRRHNLRYWLGGDFLGLGPGAWGCLGGWRYRNDPTLT----GWRARTDRGRS 294

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-QGFIERVQ 372
           A +  E LS E++A E  ++ LR R G S  +     G  +    E +L    G   R Q
Sbjct: 295 AALWGERLSGERKAREEAILALRTRWGWSPGETSRRFGFPVAEAVEADLLPFVGAFVRRQ 354

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
             R   T RG  + + +   L 
Sbjct: 355 GVRWVLTPRGFQVANRIWEALV 376


>gi|218560942|ref|YP_002393855.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|218692153|ref|YP_002400365.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|306813867|ref|ZP_07448043.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|331660417|ref|ZP_08361351.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA206]
 gi|331685604|ref|ZP_08386187.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H299]
 gi|218367711|emb|CAR05500.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli S88]
 gi|218429717|emb|CAR10678.2| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli ED1a]
 gi|294493709|gb|ADE92465.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           IHE3034]
 gi|305852865|gb|EFM53312.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|307628944|gb|ADN73248.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315289574|gb|EFU48967.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 110-3]
 gi|315300252|gb|EFU59489.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 16-3]
 gi|320196909|gb|EFW71531.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli WV_060327]
 gi|323189708|gb|EFZ74987.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           RN587/1]
 gi|323949361|gb|EGB45250.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H252]
 gi|323954358|gb|EGB50143.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H263]
 gi|324006853|gb|EGB76072.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 57-2]
 gi|330908185|gb|EGH36704.1| coproporphyrinogen 3 oxidase, oxygen-independent [Escherichia coli
           AA86]
 gi|331052366|gb|EGI24403.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA206]
 gi|331077075|gb|EGI48290.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H299]
          Length = 457

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|313157257|gb|EFR56686.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Alistipes sp. HGB5]
          Length = 370

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 114/380 (30%), Positives = 174/380 (45%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y H PFC + C YCDF           ++ + +   E+   R   G  ++++ +FGGG
Sbjct: 3   GLYFHIPFCKRVCAYCDFYKSA--DLRRMDDLLAAMHRELDDRRGYPGGEAVTTRYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P+ I  +LD  A+ +  S   E T+EANP  +      G  +AG++R+S+GVQS
Sbjct: 61  TPSLCTPEAIRGLLDHAAQLFDCSGAEETTLEANPDDLTAEYLGGLLEAGIDRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+ + R H A++A  AI  A+   F  ++ DLI+ +P          L  ALS  
Sbjct: 121 FDDDCLKLMNRRHTAAQAAEAIRAAQRAGFGNITLDLIFGVPGFGGDTLRRSLDTALSLG 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+E  T F +    G+     E V+   +       +  G   YE+SN + 
Sbjct: 181 VQHISAYHLTVEPDTAFGRRAARGEFRAVDEQVSETEFLTVHETLTRAGFEHYEVSNFAL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HN  YW    Y+GIGP AHS      H    S+E++                E+
Sbjct: 241 PGFRARHNAAYWHGAKYLGIGPAAHSFDGEERHWNVGSVERYIAG----------DPAER 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERVQFS 374
           E L++  + +E++M  LR  EGI  ++     G      +  E    LQ      R    
Sbjct: 291 ELLTNRDRFNEYVMTALRTAEGIDTREVAARFGTKRLERMREEAAPYLQSGAL--RDAGG 348

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           RL        + D+VI  L 
Sbjct: 349 RLAVPPERFLISDAVIEALF 368


>gi|332997585|gb|EGK17200.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri VA-6]
          Length = 457

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPLEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|161486044|ref|NP_756671.2| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|227885398|ref|ZP_04003203.1| coproporphyrinogen dehydrogenase [Escherichia coli 83972]
 gi|300976534|ref|ZP_07173517.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 45-1]
 gi|301046672|ref|ZP_07193800.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 185-1]
 gi|40889237|pdb|1OLT|A Chain A, Coproporphyrinogen Iii Oxidase (Hemn) From Escherichia
           Coli Is A Radical Sam Enzyme.
 gi|227837656|gb|EEJ48122.1| coproporphyrinogen dehydrogenase [Escherichia coli 83972]
 gi|300301373|gb|EFJ57758.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 185-1]
 gi|300410106|gb|EFJ93644.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 45-1]
 gi|307556009|gb|ADN48784.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ABU 83972]
 gi|315292782|gb|EFU52134.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 153-1]
          Length = 457

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWD 393

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|331665515|ref|ZP_08366413.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA143]
 gi|331057200|gb|EGI29190.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA143]
          Length = 457

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMTLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|293393654|ref|ZP_06637964.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera DSM 4582]
 gi|291423989|gb|EFE97208.1| oxygen-independent coproporphyrinogen III oxidase [Serratia
           odorifera DSM 4582]
          Length = 457

 Score =  292 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 167/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC K C +C  N  V R     ++++ +   E+     
Sbjct: 39  AAFQRAAARYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQTHKADDYLVALAREIAARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ ++   I+ ++  + +N+    + E++IE +P  +E++    
Sbjct: 99  LFAGRQVSQMHWGGGTPTYLDKAQISRLVAMLRQNFDFLPDAEMSIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   R + R  +     A I  A+   F   + DLIY LP+QT
Sbjct: 159 LRHEGFNRLSMGVQDFNKDVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPRQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L R      D LS++        LF    K  D  LP     +D+   T +  
Sbjct: 219 PESFAFTLARVAELNPDRLSVFNYAHLPD-LFAAQRKIKDADLPDAQQKLDILQQTIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPEDELAVAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMLGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   V + G A+     +S +      ++  L     ++ +  E   G
Sbjct: 338 QN----QKLLKTYYDSVEQQGSALWRGLAMSEDDCLRRDVIKTLICNFQLAYQPIEQRYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+      +R G +ER     +R T RG  ++ ++ 
Sbjct: 394 IDFTDYFAEDLHLLAPFERDGLVERDALG-IRVTPRGRLLIRNIC 437


>gi|218550894|ref|YP_002384685.1| coproporphyrinogen III oxidase [Escherichia fergusonii ATCC 35469]
 gi|218358435|emb|CAQ91082.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia fergusonii ATCC 35469]
 gi|324111946|gb|EGC05926.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia
           fergusonii B253]
          Length = 457

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFTRRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|215489200|ref|YP_002331631.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312969389|ref|ZP_07783591.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           2362-75]
 gi|215267272|emb|CAS11721.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312285936|gb|EFR13854.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           2362-75]
          Length = 457

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDAELPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|332998502|gb|EGK18100.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-272]
 gi|333013997|gb|EGK33358.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-227]
          Length = 457

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPLEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LYFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|303235933|ref|ZP_07322536.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella disiens FB035-09AN]
 gi|302483806|gb|EFL46798.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella disiens FB035-09AN]
          Length = 388

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 105/391 (26%), Positives = 186/391 (47%), Gaps = 23/391 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQL---TGPRSISSI 74
            +Y+H PFC  +C YC F S +         + ++ +   E+   +         ++ +I
Sbjct: 3   SLYIHIPFCASRCIYCGFYSTLTPKTRTETIDRYVVAVCKELVEQKNFVFQDNNETLETI 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYRKAGV 130
           +FGGGTPS + PQ+I  I   I  N++      +++EI+ E NP  V     +      +
Sbjct: 63  YFGGGTPSQLAPQHIEKIFQTIEDNYSDKMEKLADMEISFECNPDDVTEEFAENMCHFPI 122

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+G Q+  E  L+FL R H A++   AI          +S DL++  P++T+ +WE 
Sbjct: 123 NRISMGAQTFSEARLKFLRRRHKANDVKMAIDRLHRADIHNISIDLMFGFPEETLQEWED 182

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++++A++  V+HLS Y L  E+GT  Y++ + G +    E +   +Y+       A    
Sbjct: 183 DIEKAIALNVEHLSAYSLMYEEGTPLYRLLEQGKVKDMDEELYRTMYDKLIDRLVAAHYE 242

Query: 250 AYEISNHSFL------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            YEISN + L         S HN  YW    YIG+G  AH            +++K+ E 
Sbjct: 243 QYEISNFAKLINNGSSPYRSRHNSAYWANQSYIGVGASAHGYNHQQRRWNVDNLQKYMEG 302

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
                 +NG  + E E +      ++ +   LR R+GI +K+ E     ++ I+  +   
Sbjct: 303 I-----ENGTPIYEAENIDKPTHFNDTVTTALRTRKGIDLKNLEEPFKTHI-IKASKLFI 356

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +G +  ++   L  T+ G+ + D++++ L 
Sbjct: 357 ERGLLS-LENEHLHLTREGIYVSDAIMSELV 386


>gi|110644206|ref|YP_671936.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|191173864|ref|ZP_03035384.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           F11]
 gi|300985892|ref|ZP_07177628.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 200-1]
 gi|110345798|gb|ABG72035.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           536]
 gi|190905822|gb|EDV65441.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           F11]
 gi|300306493|gb|EFJ61013.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 200-1]
 gi|324012568|gb|EGB81787.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 60-1]
          Length = 457

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--- 348
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 349 -LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LLFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|88809167|ref|ZP_01124676.1| hypothetical protein WH7805_05726 [Synechococcus sp. WH 7805]
 gi|88787109|gb|EAR18267.1| hypothetical protein WH7805_05726 [Synechococcus sp. WH 7805]
          Length = 432

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 120/402 (29%), Positives = 178/402 (44%), Gaps = 31/402 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEM-QWMRQLTGPRSI 71
               Y+H PFC ++C YCDF       +V  +N      I+++L  + + +R       +
Sbjct: 6   PRSAYLHIPFCHRRCFYCDFAVVPLGDRVNAQNGPGSLTIKAYLELILKEIRSSPPGPPL 65

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           ++I+ GGGTPSL+ P  +  +LD +A  + V    EIT+E +P+S  +   +   + GVN
Sbjct: 66  ATIYIGGGTPSLLTPDQVRCLLDALADRFGVQRGAEITLEMDPASFSLEELRALVRHGVN 125

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQTMTQ 186
           R+SLG QS ++  L  LGR H   + + A H  +           S DLI  LP Q    
Sbjct: 126 RVSLGGQSFDDVVLAGLGRRHRRKDVLEACHWMQRFLQDGRLRSWSLDLIRNLPNQDDEA 185

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L +A+     HLS+Y L++E GT+F +  + G L+LP E+ A D    T    S  
Sbjct: 186 WADVLTQAVELQPPHLSIYDLSVEPGTVFARREQQGVLMLPDEDGAADRIAFTTQYLSDA 245

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN S  G  S HN  YW    +   G GA S    G         +    WL 
Sbjct: 246 GYCRYEISNFSRPGHASRHNRVYWSGAGWWAFGLGATS-APWGERFARPRTREAYAEWLN 304

Query: 307 MVRKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD------- 355
               +G            LS E +    L++GLR REG+ ++      G           
Sbjct: 305 RQELDGPHSSLLSQSATPLSLEDR----LLVGLRCREGVDLQQQAQHCGWTAHRCSLHLP 360

Query: 356 --IECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
              E       QG +ER +  R R T   GM + + ++  + 
Sbjct: 361 QLAERWEQFLNQGLMER-RGGRWRLTDPLGMALSNQILVEVV 401


>gi|225457431|ref|XP_002262672.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 473

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 187/414 (45%), Gaps = 44/414 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            +  Y+H PFC K+C YCDF         +          N+ Q    E++  +    P 
Sbjct: 56  PVSAYIHLPFCRKRCHYCDFPIVALGSSFTPPPEDDPRILNYTQLICREIEATKPECYPT 115

Query: 70  S-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPSL+ P+ ++ I++ +   + +  + E+++E +P + +    +G  + 
Sbjct: 116 PPLETVFFGGGTPSLVPPRLVSDIVEALRLKFGLCLDAEMSMEMDPGTFDAEKLKGLMEL 175

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQW 187
           GVNR+SLGVQ+ +E+ LR  GR H   E   AI   ++      S DLI +LP QT   W
Sbjct: 176 GVNRVSLGVQAFQEEMLRGCGRAHGVKEIYEAIETVKSCGVENWSVDLISSLPHQTPEMW 235

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  LQ  +     H+S+Y L +E+GT F  ++  G+  LPSE  + D Y +  +  S  G
Sbjct: 236 EESLQLVIEAQPTHVSVYDLQVEQGTKFGILYTPGEFPLPSEIQSADFYRMASTTLSNAG 295

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEIS++   G E  HNL YW    + G G G+ S V      V  S  +  + ++  
Sbjct: 296 YNHYEISSYCKGGFECKHNLTYWENKPFYGFGLGSASYVGG----VRFSRPRKMKEYMGY 351

Query: 308 VRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNL 362
           V+     VV      + ++  A + +M+ LR   G+ +K +    G +         R  
Sbjct: 352 VQSLETEVVGCGGNSVDAKDVAMDVVMLSLRTARGLDLKSFRNSFGSSFVASLCMAYRPY 411

Query: 363 QRQGFIERVQFSR------------------------LRCT-QRGMTMLDSVIA 391
            + G +  +   R                        +R +   G  + + +I+
Sbjct: 412 VKSGHVVCLDEQRRPVTSDEFSSLLSKDDGIEERLAFVRLSDPDGFLLSNELIS 465


>gi|331270015|ref|YP_004396507.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
 gi|329126565|gb|AEB76510.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Clostridium botulinum BKT015925]
          Length = 343

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 181/349 (51%), Gaps = 14/349 (4%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           + ++  TE+  ++     + I +IF GGGTP+ +  +   ++   I K    S ++E T+
Sbjct: 4   YSKALSTEIDNIK----DKKIKTIFIGGGTPTYLSLEGWNILKKSIDKLQK-SDDLEFTV 58

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFP 169
           E+NP + +    +  +  GVNRIS+G+Q+ +++ L+ LGR H   E + + ++AR   F 
Sbjct: 59  ESNPKTFDKEKLEILKSMGVNRISIGLQAWQDKHLQALGRIHTREEFLKSYNMAREVGFK 118

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DL++ +P Q+  +W+  L        +HLS Y L IE+GT FY ++++  + LPSE
Sbjct: 119 NINIDLMFGIPNQSFDEWKETLDEITELNPEHLSCYSLIIEEGTPFYNLYENNKINLPSE 178

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
            +   +Y  T       G H YEISN S    E  HNL YW   +YIG G  AHS  +  
Sbjct: 179 ELERKMYWYTLKFLKEKGYHQYEISNFSKKDKECRHNLVYWDLNEYIGCGVAAHSYSEGY 238

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            +R +  I    E ++K +  N  A+VEK   S +   +EF+ MGLR  +GIS+ ++   
Sbjct: 239 RYRNSDKI----EEYIKFIENNQSAIVEKIKNSLKSDIEEFIFMGLRKIKGISLDEFNKR 294

Query: 350 AGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              ++       + +   +G +       L  + +G+ + + ++++  +
Sbjct: 295 FKMSIYELYSDVISKHKVEGLLLEHD-GYLFLSDKGVEVSNHIMSDFIL 342


>gi|254039079|ref|ZP_04873129.1| O2-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|332282743|ref|ZP_08395156.1| O2-independent coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|13364265|dbj|BAB38212.1| O2-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. Sakai]
 gi|73857849|gb|AAZ90556.1| O2-independent coproporphyrinogen III oxidase [Shigella sonnei
           Ss046]
 gi|81247622|gb|ABB68330.1| O2-independent coproporphyrinogen III oxidase [Shigella boydii
           Sb227]
 gi|209752808|gb|ACI74711.1| response regulator for gln GlnG [Escherichia coli]
 gi|209752810|gb|ACI74712.1| response regulator for gln GlnG [Escherichia coli]
 gi|209752814|gb|ACI74714.1| response regulator for gln GlnG [Escherichia coli]
 gi|209752816|gb|ACI74715.1| response regulator for gln GlnG [Escherichia coli]
 gi|226838515|gb|EEH70544.1| O2-independent coproporphyrinogen III oxidase [Escherichia sp.
           1_1_43]
 gi|332105095|gb|EGJ08441.1| O2-independent coproporphyrinogen III oxidase [Shigella sp. D9]
          Length = 459

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|38704208|ref|NP_312816.2| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|89110161|ref|AP_003941.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111657|ref|NP_418303.2| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157159135|ref|YP_001465348.1| coproporphyrinogen III oxidase [Escherichia coli E24377A]
 gi|157163337|ref|YP_001460655.1| coproporphyrinogen III oxidase [Escherichia coli HS]
 gi|161984816|ref|YP_410158.2| coproporphyrinogen III oxidase [Shigella boydii Sb227]
 gi|161986407|ref|YP_312791.2| coproporphyrinogen III oxidase [Shigella sonnei Ss046]
 gi|168748853|ref|ZP_02773875.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755535|ref|ZP_02780542.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761767|ref|ZP_02786774.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4501]
 gi|168768152|ref|ZP_02793159.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4486]
 gi|168775317|ref|ZP_02800324.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780770|ref|ZP_02805777.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786707|ref|ZP_02811714.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC869]
 gi|168799571|ref|ZP_02824578.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC508]
 gi|170022119|ref|YP_001727073.1| coproporphyrinogen III oxidase [Escherichia coli ATCC 8739]
 gi|170083339|ref|YP_001732659.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187730229|ref|YP_001882565.1| coproporphyrinogen III oxidase [Shigella boydii CDC 3083-94]
 gi|188494005|ref|ZP_03001275.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           53638]
 gi|191166403|ref|ZP_03028234.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B7A]
 gi|193063904|ref|ZP_03044990.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E22]
 gi|193068087|ref|ZP_03049052.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E110019]
 gi|194428658|ref|ZP_03061195.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B171]
 gi|194435183|ref|ZP_03067414.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1012]
 gi|194438292|ref|ZP_03070383.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           101-1]
 gi|195937504|ref|ZP_03082886.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808451|ref|ZP_03250788.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4206]
 gi|208812970|ref|ZP_03254299.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820972|ref|ZP_03261292.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4042]
 gi|209396387|ref|YP_002273383.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4115]
 gi|217326436|ref|ZP_03442520.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. TW14588]
 gi|218556426|ref|YP_002389340.1| coproporphyrinogen III oxidase [Escherichia coli IAI1]
 gi|218697580|ref|YP_002405247.1| coproporphyrinogen III oxidase [Escherichia coli 55989]
 gi|238902934|ref|YP_002928730.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli BW2952]
 gi|253775498|ref|YP_003038329.1| coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163818|ref|YP_003046926.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|254795858|ref|YP_003080695.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021504|ref|ZP_05435369.1| coproporphyrinogen III oxidase [Shigella sp. D9]
 gi|256026100|ref|ZP_05439965.1| coproporphyrinogen III oxidase [Escherichia sp. 4_1_40B]
 gi|260846365|ref|YP_003224143.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O103:H2 str. 12009]
 gi|260870583|ref|YP_003236985.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O111:H- str. 11128]
 gi|261223493|ref|ZP_05937774.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257256|ref|ZP_05949789.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291285277|ref|YP_003502095.1| Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O55:H7 str. CB9615]
 gi|293470178|ref|ZP_06664589.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|300819246|ref|ZP_07099446.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 107-1]
 gi|300823688|ref|ZP_07103814.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 119-7]
 gi|300906184|ref|ZP_07123896.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 84-1]
 gi|300919050|ref|ZP_07135594.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 115-1]
 gi|300925944|ref|ZP_07141778.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 182-1]
 gi|300931700|ref|ZP_07147007.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 187-1]
 gi|300948169|ref|ZP_07162298.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 116-1]
 gi|300957297|ref|ZP_07169524.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 175-1]
 gi|301027908|ref|ZP_07191199.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 196-1]
 gi|301303335|ref|ZP_07209459.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 124-1]
 gi|301328183|ref|ZP_07221311.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 78-1]
 gi|301648442|ref|ZP_07248173.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 146-1]
 gi|307140561|ref|ZP_07499917.1| coproporphyrinogen III oxidase [Escherichia coli H736]
 gi|307314013|ref|ZP_07593627.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|309797825|ref|ZP_07692208.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 145-7]
 gi|312971847|ref|ZP_07786021.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1827-70]
 gi|331644596|ref|ZP_08345715.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H736]
 gi|331655549|ref|ZP_08356541.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M718]
 gi|331670709|ref|ZP_08371545.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA271]
 gi|331679974|ref|ZP_08380636.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H591]
 gi|2506308|sp|P32131|HEMN_ECOLI RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1220106|dbj|BAA03961.1| hemN [Escherichia coli W3110]
 gi|85676192|dbj|BAE77442.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K12 substr.
           W3110]
 gi|87082341|gb|AAC76864.2| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157069017|gb|ABV08272.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           HS]
 gi|157081165|gb|ABV20873.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E24377A]
 gi|169757047|gb|ACA79746.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ATCC 8739]
 gi|169891174|gb|ACB04881.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187427221|gb|ACD06495.1| oxygen-independent coproporphyrinogen III oxidase [Shigella boydii
           CDC 3083-94]
 gi|187769143|gb|EDU32987.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4196]
 gi|188016759|gb|EDU54881.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4113]
 gi|188489204|gb|EDU64307.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           53638]
 gi|189001408|gb|EDU70394.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357108|gb|EDU75527.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362689|gb|EDU81108.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4486]
 gi|189367897|gb|EDU86313.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373340|gb|EDU91756.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC869]
 gi|189378080|gb|EDU96496.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC508]
 gi|190903503|gb|EDV63221.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B7A]
 gi|192929369|gb|EDV82977.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E22]
 gi|192958707|gb|EDV89145.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E110019]
 gi|194413241|gb|EDX29526.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B171]
 gi|194416581|gb|EDX32719.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1012]
 gi|194422729|gb|EDX38725.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           101-1]
 gi|208728252|gb|EDZ77853.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4206]
 gi|208734247|gb|EDZ82934.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4045]
 gi|208741095|gb|EDZ88777.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4042]
 gi|209157787|gb|ACI35220.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EC4115]
 gi|217322657|gb|EEC31081.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. TW14588]
 gi|218354312|emb|CAV01023.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli 55989]
 gi|218363195|emb|CAR00837.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli IAI1]
 gi|238860613|gb|ACR62611.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli BW2952]
 gi|242379404|emb|CAQ34218.1| coproporphyrinogen III dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253326542|gb|ACT31144.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975719|gb|ACT41390.1| coproporphyrinogen III oxidase [Escherichia coli B str. REL606]
 gi|253979875|gb|ACT45545.1| coproporphyrinogen III oxidase [Escherichia coli BL21(DE3)]
 gi|254595258|gb|ACT74619.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O157:H7 str.
           TW14359]
 gi|257761512|dbj|BAI33009.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O103:H2 str. 12009]
 gi|257766939|dbj|BAI38434.1| coproporphyrinogen III oxidase HemN, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli O111:H- str. 11128]
 gi|260451298|gb|ACX41720.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           DH1]
 gi|290765150|gb|ADD59111.1| Oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           O55:H7 str. CB9615]
 gi|291321388|gb|EFE60827.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B088]
 gi|299878990|gb|EFI87201.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 196-1]
 gi|300315954|gb|EFJ65738.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 175-1]
 gi|300401986|gb|EFJ85524.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 84-1]
 gi|300413830|gb|EFJ97140.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 115-1]
 gi|300417999|gb|EFK01310.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 182-1]
 gi|300452286|gb|EFK15906.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 116-1]
 gi|300460539|gb|EFK24032.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 187-1]
 gi|300523750|gb|EFK44819.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 119-7]
 gi|300528132|gb|EFK49194.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 107-1]
 gi|300841289|gb|EFK69049.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 124-1]
 gi|300845320|gb|EFK73080.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 78-1]
 gi|301073485|gb|EFK88291.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 146-1]
 gi|306906330|gb|EFN36846.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           W]
 gi|308118581|gb|EFO55843.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 145-7]
 gi|309704292|emb|CBJ03641.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           ETEC H10407]
 gi|310334224|gb|EFQ00429.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1827-70]
 gi|315063152|gb|ADT77479.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli W]
 gi|315138435|dbj|BAJ45594.1| O2-independent coproporphyrinogen III oxidase [Escherichia coli
           DH1]
 gi|315254231|gb|EFU34199.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 85-1]
 gi|315618767|gb|EFU99351.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           3431]
 gi|320182139|gb|EFW57042.1| Coproporphyrinogen III oxidase, oxygen-independent [Shigella boydii
           ATCC 9905]
 gi|320185492|gb|EFW60260.1| Coproporphyrinogen III oxidase, oxygen-independent [Shigella
           flexneri CDC 796-83]
 gi|320191042|gb|EFW65692.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli O157:H7 str. EC1212]
 gi|320198933|gb|EFW73531.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli EC4100B]
 gi|320639204|gb|EFX08831.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320644592|gb|EFX13646.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str.
           493-89]
 gi|320649916|gb|EFX18424.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H
           2687]
 gi|320655223|gb|EFX23169.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660850|gb|EFX28296.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666009|gb|EFX33028.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323161072|gb|EFZ46990.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E128010]
 gi|323167493|gb|EFZ53200.1| oxygen-independent coproporphyrinogen III oxidase [Shigella sonnei
           53G]
 gi|323174268|gb|EFZ59895.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           LT-68]
 gi|323177876|gb|EFZ63460.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1180]
 gi|323182384|gb|EFZ67791.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           1357]
 gi|323380784|gb|ADX53052.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           KO11]
 gi|323934353|gb|EGB30766.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E1520]
 gi|323939087|gb|EGB35303.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E482]
 gi|323943762|gb|EGB39859.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H120]
 gi|323959366|gb|EGB55027.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H489]
 gi|323969733|gb|EGB65016.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA007]
 gi|324115639|gb|EGC09577.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           E1167]
 gi|326338130|gb|EGD61960.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli O157:H7 str. 1044]
 gi|326342576|gb|EGD66349.1| Coproporphyrinogen III oxidase, oxygen-independent [Escherichia
           coli O157:H7 str. 1125]
 gi|331036058|gb|EGI08294.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H736]
 gi|331046650|gb|EGI18735.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           M718]
 gi|331061964|gb|EGI33887.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TA271]
 gi|331072300|gb|EGI43633.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           H591]
 gi|332085160|gb|EGI90338.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 155-74]
 gi|332088568|gb|EGI93682.1| oxygen-independent coproporphyrinogen III oxidase [Shigella boydii
           3594-74]
 gi|332345857|gb|AEE59191.1| oxygen-independent coproporphyrinogen III oxidase HemN [Escherichia
           coli UMNK88]
          Length = 457

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|323974269|gb|EGB69398.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           TW10509]
          Length = 457

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R IS + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHISQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|196016273|ref|XP_002117990.1| hypothetical protein TRIADDRAFT_13916 [Trichoplax adhaerens]
 gi|190579463|gb|EDV19558.1| hypothetical protein TRIADDRAFT_13916 [Trichoplax adhaerens]
          Length = 343

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 132/340 (38%), Positives = 211/340 (62%), Gaps = 5/340 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           VY+HWP+C K C YC+FN  V +  V  +   +  +  ++ + QL   +++ SI+FGGGT
Sbjct: 1   VYIHWPYCKKHCHYCNFNKVV-QQLVDHDRMTECMIRAVKGLLQLGHVKTVKSIYFGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL +P NI  ++  I++  T+  ++EIT+EANP+S E+     +++AG+NR+SLG+Q+L
Sbjct: 60  PSLCKPDNIQRMISAISQCATLGDDIEITMEANPTSTEMEKMGHFKQAGINRLSLGIQAL 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ LGR+H+A++A  AI +A+  FP R S DLI+A P QT+ +W  EL++A+S   
Sbjct: 120 NDKDLQILGRDHDAAQAKQAIDIAKAHFPKRTSIDLIFARPNQTIPEWSTELEKAISMCD 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+SLYQLT+E+GT  +K  +   L LP E++   +Y    +    +G   YE+SN +  
Sbjct: 180 NHVSLYQLTLERGTKLHKQVQQQSLHLPDEDIIAQMYENAINTMRRYGYQRYEVSNFAKQ 239

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGS---HRVAISIEKHPESWLKMVRKNGHAVV 316
           GA S HNL+YW   DYIG+GPGAH R+ + S    R A+     P  W+ MV +    + 
Sbjct: 240 GAISQHNLSYWTSNDYIGVGPGAHGRLIIPSLEYQRYAMIQCLSPNHWMTMVEQGKLGIQ 299

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           + +  S  ++  E +++G+R   GIS K W+ +A   L+ 
Sbjct: 300 KMQKQSEMERLTELILLGMRTPAGISRKRWDSIASPKLEF 339


>gi|297588459|ref|ZP_06947102.1| possible coproporphyrinogen dehydrogenase [Finegoldia magna ATCC
           53516]
 gi|297573832|gb|EFH92553.1| possible coproporphyrinogen dehydrogenase [Finegoldia magna ATCC
           53516]
          Length = 382

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 186/379 (49%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF++  ++Y+   + +     TE+   +       I +I+ GGG
Sbjct: 18  GIYIHIPFCDYKCNYCDFSTMTKQYQ-RVDEYFDLLQTEINMYKN--PNDKIDTIYIGGG 74

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+  + I    + I   + +    E  IE NP  V     + Y+K G++RISLGVQS
Sbjct: 75  TPNLVNSKYIEKTYNLIDNCFNI-QLKEFAIECNPEFVTKEKIENYKKIGIDRISLGVQS 133

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +Q  +FLGR H  S+ + +  + R+    +S DLI+  P QT+   + +L        
Sbjct: 134 FNDQYNKFLGRGHKVSDVLKSFEIIRDYIDNISIDLIFGFPNQTLESLDNDLYYIEKLNP 193

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK +   D +  +++   D+Y    +         YEISN +  
Sbjct: 194 NHVSRYNMILEPGTKFYKEY---DDINRNDDKEYDMYLKICNGLE--KYKHYEISNFAKD 248

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES+HN  YW+  +Y G G  +   +    +        +P+ + K +  N   +   E
Sbjct: 249 KFESIHNKIYWKDENYYGFGLSSSGYLNQHRYTNEFF---YPD-YKKKILNNEKPISFSE 304

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRL 376
            +  E++  EF++  +RL+EG+ +K ++   G NL   + +   N   +G +  +  + L
Sbjct: 305 KIDLEKREFEFIITNMRLKEGLDLKVYQDKFGINLYAKNKKLIDNWINRGLLT-LDNNHL 363

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + +S   ++ V
Sbjct: 364 SFTNQGFFVSNSFFVDILV 382


>gi|332084076|gb|EGI89281.1| oxygen-independent coproporphyrinogen III oxidase [Shigella boydii
           5216-82]
          Length = 457

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGMLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|283787467|ref|YP_003367332.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           rodentium ICC168]
 gi|282950921|emb|CBG90598.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           rodentium ICC168]
          Length = 457

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFKGRQVSQLHWGGGTPTYLNKAQISRLMTLLRDNFRFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A +  AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLRHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++      D LS++       TLF    K  D  LP     +D+   T +  
Sbjct: 219 PESFAFTLKKVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPGAQQKLDILQQTIASL 277

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E   +  N     N+  Y      D +G+G  A S +     
Sbjct: 278 TESGYQFIGMDHFARPDDELAIAQRNGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKLYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAAVEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N+      D++    L   G +E  +   +R T +G  ++ ++ 
Sbjct: 394 LNVADYFAEDLKLLAPLANDGLVEVNEKG-IRVTAKGRLLIRNIC 437


>gi|328471663|gb|EGF42540.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus 10329]
          Length = 463

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 25/409 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  +++ + + +T S + EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVSLDSDDLLRREVIKQLICNFKLDKKAIESEF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               D   + +LQ          +E V  + +R T RG  ++ ++  + 
Sbjct: 399 RVKFDQYFKEDLQLLQTFINDELVE-VDDNEIRVTLRGRLLIRNICMSF 446


>gi|293417327|ref|ZP_06659951.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291430847|gb|EFF03843.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 457

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELALAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|261342940|ref|ZP_05970798.1| hypothetical protein ENTCAN_09538 [Enterobacter cancerogenus ATCC
           35316]
 gi|288314687|gb|EFC53625.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cancerogenus ATCC 35316]
          Length = 457

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 171/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  ADFQQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++    
Sbjct: 99  LFAGRQVSQLHWGGGTPTYLNKAQISRLMTLLRGNFRFNDDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLRRVAKLNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TEAGYQFIGMDHFARPDDELAIAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V   G+A+     L+ +      ++  L     +   + E    
Sbjct: 338 QN----QKELKLYYQQVDDTGNALWRGIALTRDDCIRRDVIKALICNFRLDFSEIEAQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D++    L + G ++    S +  T +G  ++ ++ 
Sbjct: 394 LQFSDYFAEDLKLIAPLAKDGLVDVTD-SAIVVTPKGRLLIRNIC 437


>gi|28896889|ref|NP_796494.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365925|ref|ZP_05778419.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260877787|ref|ZP_05890142.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260895563|ref|ZP_05904059.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|260902588|ref|ZP_05910983.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|28805097|dbj|BAC58378.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308088486|gb|EFO38181.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308089769|gb|EFO39464.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308109706|gb|EFO47246.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308113448|gb|EFO50988.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 463

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 25/409 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDLLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  +++ + + +T S + EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVSLDSDDLLRREVIKQLICNFKLDKKAIESEF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               D   + +LQ          +E V  + +R T RG  ++ ++  + 
Sbjct: 399 RVKFDQYFKEDLQLLQTFINDELVE-VDDNEIRVTLRGRLLIRNICMSF 446


>gi|313886793|ref|ZP_07820499.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923757|gb|EFR34560.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Porphyromonas asaccharolytica PR426713P-I]
          Length = 371

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 124/377 (32%), Positives = 184/377 (48%), Gaps = 10/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGG 78
           G+Y+H PFC  +C YCDF S        Q  F+++   E+           +  +I+ GG
Sbjct: 3   GLYLHIPFCPTRCIYCDFYSQ--SDLSLQSAFVEALCRELTIYCDRGLWATAPRTIYLGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    +  ++  I   W +  ++EITIEANP  V     +G  + G NRISLGVQ
Sbjct: 61  GTPSSLPLPLLERLMQHIRSLWRLDKSIEITIEANPEDVSPEWARGVAQLGFNRISLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL +++LRFL R H+A++A  AI   R      +S DLI+ALPK     W   L  AL  
Sbjct: 121 SLSDETLRFLQRRHSAAQAELAISYIREAGISNVSIDLIFALPKGYEQHWFESLAHALVL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y LT E GT   +M + G +   SE   V  Y    +     G   YE+SN +
Sbjct: 181 PVTHLSAYGLTYESGTRLDRMRESGAVTPSSEETYVKQYYALVAACQKAGFTHYELSNWA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YW    Y+G+GP AHS +     R           +++ ++++   + +
Sbjct: 241 LPGFASQHNSAYWDGTPYLGLGPSAHSYM----ARHRWWNLSDIHLYIERLQQDTLPIAD 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E+LS  + ++E +M+GLR   GI ++   +L G  L ++       QG +       LR
Sbjct: 297 EEWLSLTELSEECIMLGLRTSRGIDLRR-PVLQGVPL-MDRATPWLDQGLLTYTADDHLR 354

Query: 378 CTQRGMTMLDSVIANLA 394
            T  G+   D +   L 
Sbjct: 355 LTHEGLIWCDRICTALC 371


>gi|145340617|ref|XP_001415418.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575641|gb|ABO93710.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 408

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 185/408 (45%), Gaps = 34/408 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV---------------RRYKVGQENFIQSFLTEMQWM 62
               YVH PFC  +C YCDF   V               RRY       + +    M+  
Sbjct: 1   PRAAYVHLPFCRSRCYYCDFAISVVGRAGETRPDVDAAMRRYGAATRAEVAATARAMRAN 60

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L     + ++FFGGGTPSL+    I  IL  + + + ++++ E++ E +P + +    
Sbjct: 61  GALDASAPLETVFFGGGTPSLMPADEIKAILGSLREAFGLAADAEVSAEMDPGTFDEEKL 120

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
           + +  AGVNR+SLGVQS ++  L+  GR+H+A  A  AI  L R   PR S DLI  LP 
Sbjct: 121 RAFLAAGVNRVSLGVQSFDDGVLQRAGRSHDARAAEEAIDTLRRCGVPRWSADLISGLPG 180

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH-----KDGDLVLPSENVAVDLY 236
                W   L+R +    DH+S+Y L +E+GT FY+ +     KD    LPSE+ +  ++
Sbjct: 181 VDAKTWRTSLERVIEAGADHVSVYDLQVERGTAFYRWYGENAGKDKKEGLPSEDASAAMF 240

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
               +   A G   YE+S+++  GA   HN  YW    + G G  A S V          
Sbjct: 241 RDASATLGAAGYEHYEVSSYAKPGARCKHNQIYWENAGWYGFGLSATSHVNGERVARPRK 300

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           + ++  ++++ + +  +               E +M+ LR  +G+ + +     G ++  
Sbjct: 301 MNEYY-AYVEALERGENVGTVSSGGDGSDALFEHIMLRLRTSDGLDLGNVSRRFGDHVVE 359

Query: 357 ECERNLQRQGFI-ERVQFSR--------LRCT-QRGMTMLDSVIANLA 394
           E    +  + F+ E V ++         LR T   G  +  +V++ L 
Sbjct: 360 EIREAM--EPFVPEFVDYTVAADSSPAALRLTDPEGFLVSTAVLSTLI 405


>gi|325678497|ref|ZP_08158112.1| putative coproporphyrinogen dehydrogenase [Ruminococcus albus 8]
 gi|324109808|gb|EGC04009.1| putative coproporphyrinogen dehydrogenase [Ruminococcus albus 8]
          Length = 372

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 191/380 (50%), Gaps = 20/380 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH PFC++KCPYC F S +   +   E ++Q+    + + +         +++ GG
Sbjct: 2   LGIYVHVPFCLRKCPYCSFYS-LPYDEDTAEKYVQAICRNIAYYKD--RGLRADTLYLGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++  + +  IL+   + + +  N EIT+EANP +V+ +  +  R AG NRIS G+Q
Sbjct: 59  GTPSVLTAEQLGRILNECRQVF-LLDNAEITLEANPCTVDEHKMRELRDAGFNRISFGIQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S++   LRFLGR H++S A+ A+  A+   F  +S D++     + +      L+   S 
Sbjct: 118 SVDNDRLRFLGRLHDSSTAVNAVLNAQKAGFENISGDIMLGAANEDINSLCSSLEAICSL 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L IEKGT FY        ++  +++  +LY     +    G   YEISN +
Sbjct: 178 PLKHVSAYMLKIEKGTPFYD--DKYKNLIADDDLMSELYLTAVEMLEKKGFKQYEISNFA 235

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +S HN  YW+  +YIG GP AHS      +     ++   ES L+           
Sbjct: 236 MDGYQSRHNNKYWQGEEYIGFGPSAHSFFNCVRYFCPPDLKDFIESDLQTCDMAE----- 290

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFS 374
               +   +A+E++++GLRLR+GIS+     L       +  +  +   R G +     +
Sbjct: 291 ----ADPDKAEEYILLGLRLRKGISLDKVSELYSTEAAEKIRKLAEMYKRHGLV-ICDGN 345

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            +  T +G  + +S+I+   
Sbjct: 346 TVSLTAKGFLVSNSIISEFI 365


>gi|209752812|gb|ACI74713.1| response regulator for gln GlnG [Escherichia coli]
          Length = 459

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDY 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|298369986|ref|ZP_06981302.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298281446|gb|EFI22935.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 468

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A E    G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 46  EYVKALELRGIGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 105

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  I   I K++ +  + E +IE +P  V  +
Sbjct: 106 LAPHLGGRHRLAQLHFGGGTPTFLSDDQLERIFHMIRKHFQLIPDGEYSIEIDPRKVSRD 165

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 166 TVLMLGKLGFNRMSVGIQDFDSKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 225

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 226 PHQTAESIKTTIDTVLSLDPDRLALYHYAHLPH-IFKPQRRIDTDAVPGSEEKLDMLQYC 284

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +           E L   N+  Y      D + IG  +  ++ 
Sbjct: 285 VQTLTRRGYVFIGMDHFAKPDDELSVALREGLLQRNFQGYSTYADCDLVAIGVSSIGKIG 344

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E++ + +   +      V+    L+ +      ++  L  R  +  + +E
Sbjct: 345 STYSQN----ERNIDDYYAAIDAGHLPVMRGYQLNQDDLLRRTVIQDLMCRFALDYRAYE 400

Query: 348 MLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            + G         ++   + L   G +       L+ T +G  ++ ++
Sbjct: 401 SVFGIPFGHYFKEELADLQQLAELGLVRLSSHG-LKVTPKGRFLIRNI 447


>gi|218701434|ref|YP_002409063.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|300937091|ref|ZP_07151953.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 21-1]
 gi|218371420|emb|CAR19253.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Escherichia coli IAI39]
 gi|300457823|gb|EFK21316.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 21-1]
          Length = 457

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R    NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEDFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|325499165|gb|EGC97024.1| coproporphyrinogen III oxidase [Escherichia fergusonii ECD227]
          Length = 457

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFTRRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIVFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|170683331|ref|YP_001746196.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170521049|gb|ACB19227.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           SMS-3-5]
          Length = 457

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRKVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R    NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEDFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKHYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|81243107|gb|ABB63817.1| O2-independent coproporphyrinogen III oxidase [Shigella dysenteriae
           Sd197]
          Length = 459

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I     + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGLTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|46446730|ref|YP_008095.1| coproporphyrinogen III oxidase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400371|emb|CAF23820.1| putative oxygen-independent coproporphyrinogen III oxidase, hemN
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 385

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 124/383 (32%), Positives = 194/383 (50%), Gaps = 10/383 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ + +Y H PFC KKC YC F     +  +  +  I +   E + M  L   + I SI+
Sbjct: 9   SSEISLYFHIPFCTKKCNYCHFYVLPDQEPLKNQLLI-ALKLEWKRMLPLLINKCIISIY 67

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTPSL  P  I  +L+ I ++     S  EIT+E NP +   +  + Y +AG+NR+S
Sbjct: 68  FGGGTPSLFSPDRIQAVLETIHQDLPFDYSTTEITLEVNPENGYFSLMRAYAQAGINRVS 127

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           +G+Q+L+++ L  LGR H+ S A  ++          +S DL+Y LP+Q++  WEM LQ 
Sbjct: 128 IGIQTLDQELLHLLGRLHSPSLAKRSVLETYEAGITNLSIDLMYDLPRQSLKHWEMTLQE 187

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +  + HLSLY LTIE  T+F+K       +LP E  ++ +YN      ++ GL  YEI
Sbjct: 188 IGTLPLSHLSLYNLTIEPFTVFFKKQNFVRPLLPDEETSLAMYNAAIEHLTSFGLEQYEI 247

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           S  +  G  S HN  YW    +IG GP A S  +    R   +++K    + + +  N  
Sbjct: 248 SAFAKPGFYSKHNTGYWLARPFIGFGPSAFSYWEGKRFRNVANLKK----YHQSLTLNQS 303

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR--NLDIECERNLQRQGFIERV 371
            +   E L       E  ++ +RL +GIS+ D+E   G+     +E        GF+ + 
Sbjct: 304 PIDFNEQLDPIAHLKELFVIQIRLCQGISIADFEQRHGKLSQETLETIEQFILDGFLTQ- 362

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               L  T++G+   D+V + L 
Sbjct: 363 SNQILSLTKKGVLFYDTVASELI 385


>gi|30064844|ref|NP_839015.1| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 2457T]
 gi|56480460|ref|NP_709665.2| coproporphyrinogen III oxidase [Shigella flexneri 2a str. 301]
 gi|110807449|ref|YP_690969.1| coproporphyrinogen III oxidase [Shigella flexneri 5 str. 8401]
 gi|30043104|gb|AAP18826.1| O2-independent coproporphyrinogen III oxidase [Shigella flexneri 2a
           str. 2457T]
 gi|56384011|gb|AAN45372.2| O2-independent coproporphyrinogen III oxidase [Shigella flexneri 2a
           str. 301]
 gi|110616997|gb|ABF05664.1| O2-independent coproporphyrinogen III oxidase [Shigella flexneri 5
           str. 8401]
 gi|281603255|gb|ADA76239.1| O2-independent coproporphyrinogen III oxidase [Shigella flexneri
           2002017]
 gi|313647094|gb|EFS11549.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 2a str. 2457T]
 gi|332751494|gb|EGJ81895.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-671]
 gi|332753192|gb|EGJ83575.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 2747-71]
 gi|332764609|gb|EGJ94841.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 2930-71]
 gi|333013945|gb|EGK33307.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-304]
          Length = 457

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVYEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPLEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|12518746|gb|AAG59056.1|AE005617_5 O2-independent coproporphyrinogen III oxidase [Escherichia coli
           O157:H7 str. EDL933]
          Length = 459

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++ V    ++ T +G  ++ ++ 
Sbjct: 396 LHFADYFAEDLKLLAPLAKDGLVD-VDXKGIQVTAKGRLLIRNIC 439


>gi|229817605|ref|ZP_04447887.1| hypothetical protein BIFANG_02873 [Bifidobacterium angulatum DSM
           20098]
 gi|229785394|gb|EEP21508.1| hypothetical protein BIFANG_02873 [Bifidobacterium angulatum DSM
           20098]
          Length = 372

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 112/368 (30%), Positives = 173/368 (47%), Gaps = 24/368 (6%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPSLIEPQNIALILDGIAKNW 100
             + N+    + EM+ +R       I     S++FFGGGTP+++   ++  +LD I + W
Sbjct: 5   ASRGNYANMVVREMRLVRDWQREHGIDEPAASTVFFGGGTPTVLRAADLVKMLDAIRELW 64

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
            ++ + EIT EANP +V+ +  +     G NRIS G+QS     L+ L R H  S   A 
Sbjct: 65  GIADDAEITTEANPDTVDADYVKELADGGFNRISFGMQSAVPSVLKTLDRTHTPSNVAAG 124

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +  A     R S DLIY  P +++  W   +  A+   V+H+S Y LTI   T   +   
Sbjct: 125 VEAANAAGMRSSVDLIYGAPGESLDDWRTSVSTAIDLGVNHISAYALTIAPHTKMGRRIA 184

Query: 221 DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGP 280
            G L  P ++   + Y +   + SA GL  YEISN +  G ES HNL YWR  D+ G+GP
Sbjct: 185 AGTLPTPDDDDEANKYEIADDLLSAAGLEWYEISNWARPGYESRHNLGYWRNVDWAGLGP 244

Query: 281 GAHSRVKVGSH--------------RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
           GAHS                      +      HP+ W + +          E +S E+ 
Sbjct: 245 GAHSHYNRCLADSSGETGETTSSPLGLRSWDIAHPKLWGQSIIDGKVPWDGSERISHEEH 304

Query: 327 ADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
            +E +M+GLRLR G+ +       G  +D+   R ++ +G I  +   R+  T+ G  + 
Sbjct: 305 LEETIMLGLRLRGGLDLALL----GDTVDMTRIRPMENEGLIT-IHGGRVVPTRTGRLLN 359

Query: 387 DSVIANLA 394
           D+VI    
Sbjct: 360 DTVIERFF 367


>gi|161950011|ref|YP_405308.2| coproporphyrinogen III oxidase [Shigella dysenteriae Sd197]
 gi|309783775|ref|ZP_07678421.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1617]
 gi|308928358|gb|EFP73819.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           dysenteriae 1617]
          Length = 457

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I     + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGLTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|332751657|gb|EGJ82056.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri 4343-70]
 gi|332998609|gb|EGK18206.1| oxygen-independent coproporphyrinogen III oxidase [Shigella
           flexneri K-218]
          Length = 457

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVYEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPLEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFEEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|161367479|ref|NP_290492.2| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 457

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++ V    ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVD-VDXKGIQVTAKGRLLIRNIC 437


>gi|283834621|ref|ZP_06354362.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           youngae ATCC 29220]
 gi|291069532|gb|EFE07641.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter
           youngae ATCC 29220]
          Length = 457

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+ N +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  EAFLNAVARYPERPLSLYVHIPFCHKLCYFCGCNKVVTRQQHKADQYLDVLEQEIIHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMSLLRGNFNFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T S  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETISSL 277

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 278 TETGYQFIGMDHFARPDDELAIAQRKGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 335 -NYAQNQKELKRYYQQVDEQGNALWRGIALTRDDCIRRDVIKLLICNFRLDYAAVEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LNFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTPKGRLLIRNIC 437


>gi|157147353|ref|YP_001454672.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157084558|gb|ABV14236.1| hypothetical protein CKO_03145 [Citrobacter koseri ATCC BAA-895]
          Length = 457

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+++ +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  EAFQHAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIIHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N+  + +VEI+IE +P  +E++    
Sbjct: 99  LFAGRRVSQLHWGGGTPTYLNKAQISRLMTLLRGNFHFNDDVEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   R + R  +     + ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAQGFNRLSMGVQDFNKDVQRLVNREQDEEFIFSLLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R    + D LS++       TLF    K  +  LPS    +D+   T S  
Sbjct: 219 PESFAFTLRRVAELSPDRLSVFNYAHLP-TLFAAQRKIKEADLPSAQQKLDILQETISSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TETGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKHYYQQVDELGNALWRGIVLTRDDCIRRDIIKSLICNFRLDYAAVEQQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D+     L + G ++      ++ T +G  ++ ++ 
Sbjct: 394 LNFAAYFAEDLALLAPLAKDGLVDVDDKG-IQVTPKGRLLIRNIC 437


>gi|332300088|ref|YP_004442009.1| oxygen-independent coproporphyrinogen III oxidase [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177151|gb|AEE12841.1| oxygen-independent coproporphyrinogen III oxidase [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 371

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 124/377 (32%), Positives = 184/377 (48%), Gaps = 10/377 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGG 78
           G+Y+H PFC  +C YCDF S        Q  F+++   E+           +  +I+ GG
Sbjct: 3   GLYLHIPFCPTRCIYCDFYSQ--SDLSLQSAFVEALCRELTIYCDRGLWATAPRTIYLGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    +  ++  I   W +  ++EITIEANP  V     +G  + G NRISLGVQ
Sbjct: 61  GTPSSLPLPLLERLMQHIHSLWRLDKSIEITIEANPEDVSPEWARGVAQLGFNRISLGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL +++LRFL R H+A++A  AI   R      +S DLI+ALPK     W   L  AL  
Sbjct: 121 SLSDETLRFLQRRHSAAQAELAISYIREAGISNVSIDLIFALPKGYEQHWFESLAHALVL 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y LT E GT   +M + G +   SE   V  Y    +     G   YE+SN +
Sbjct: 181 PVTHLSAYGLTYESGTRLDRMRESGAVTPSSEETYVKQYYALVAACRKAGFTHYELSNWA 240

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  S HN  YW    Y+G+GP AHS +     R           +++ ++++   + +
Sbjct: 241 LPGFASQHNSAYWDGTPYLGLGPSAHSYM----ARHRWWNLSDIHLYIERLQQDTLPIAD 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E+LS  + ++E +M+GLR   GI ++   +L G  L ++       QG +       LR
Sbjct: 297 EEWLSLTELSEECIMLGLRTSRGIDLRR-PVLQGVPL-MDRATPWLDQGLLTYTADDHLR 354

Query: 378 CTQRGMTMLDSVIANLA 394
            T  G+   D +   L 
Sbjct: 355 LTHEGLIWCDRICTALC 371


>gi|160932288|ref|ZP_02079679.1| hypothetical protein CLOLEP_01123 [Clostridium leptum DSM 753]
 gi|156868890|gb|EDO62262.1| hypothetical protein CLOLEP_01123 [Clostridium leptum DSM 753]
          Length = 378

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 118/390 (30%), Positives = 184/390 (47%), Gaps = 19/390 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M  +  + +G+Y+H PFC  KCPYCDF S     +   +++    ++E+    +   PR 
Sbjct: 1   MIPRRRDPIGLYLHIPFCDGKCPYCDFYSLPAGSRT-MDDYCGRLISELFLWGEKC-PRF 58

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++FGGGTPSL+    ++ ++    K ++     EIT+E NP S    +F   R AG 
Sbjct: 59  ADTLYFGGGTPSLLGADRLSRLITAAQKAFSFVPGAEITVEMNPCSAGGFDFPALRMAGA 118

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS+G+QS  +  L+FLGR H A +A      A+   F  +S DL+  L  QT      
Sbjct: 119 NRISIGLQSALDAELQFLGRRHTARQAWDTAAAAQRAGFRSVSLDLMLGLEGQTTDSVRK 178

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +       V H+S Y L IE GT F++  +     LP ++ A DLY          GL 
Sbjct: 179 SVAFCRDAGVTHVSAYLLKIEPGTRFFQQREAF--HLPGDDQASDLYLAACQALEEAGLF 236

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES--WL-K 306
            YEISN S  G ES HNL YW   +Y+GIGP AHS           S+    ++  +L +
Sbjct: 237 QYEISNFSVPGKESRHNLKYWNGDEYLGIGPSAHSFFGGRRFYTPKSLSAFFQAPQYLPE 296

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR-- 364
              ++                +E+ M+ LRL EG++   ++      +  +  +N  R  
Sbjct: 297 DPDESAIPPGG---------PEEYTMLRLRLSEGLTEAGYQQRFQTPIPEKYRKNALRFQ 347

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  V    +R T+RG  + + +I  + 
Sbjct: 348 APGLTLVDSQGIRLTRRGFLVSNQLIGEIL 377


>gi|320527315|ref|ZP_08028500.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Solobacterium moorei F0204]
 gi|320132339|gb|EFW24884.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Solobacterium moorei F0204]
          Length = 366

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 110/383 (28%), Positives = 190/383 (49%), Gaps = 24/383 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +    +Y+H PFC   C YCDF  HV   +   E ++++  T++Q         ++ +I+
Sbjct: 4   TKPKHLYLHVPFCRTICTYCDFC-HVGYQETVAEQWLEAITTDIQ---NRHLNENLVTIY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +    +  +L  +     +    E TIE NP + + +  +  +K GVNR S+
Sbjct: 60  IGGGTPTALSSSELDQLLSLLDPYARMVQ--EYTIEINPETFDEDKAKILQKHGVNRASI 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           G Q+ +E+ L+ + R+H   +    + L R      +S DL+Y+LP QTM   E  LQ A
Sbjct: 118 GFQTSDEKLLQMMNRHHRLEDVAETMRLLRKYGIDNISLDLMYSLPTQTMESLEKSLQDA 177

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++    HLSLY LTIE  T+F K   +       +++  D+Y         +G   YEIS
Sbjct: 178 IALEPTHLSLYSLTIEPNTVFAKKGYEHL----EDDIEADMYEWICDFLPKYGFVQYEIS 233

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +     S+HN  YW Y D+ GIG GA        + +  +++K+ E           +
Sbjct: 234 NFAKGNMISIHNCAYWNYQDFYGIGCGASGLEGSTRYDIPKNVKKYIED---------SS 284

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERV 371
           + +   L+ ++Q  E +MMGLRL+EG++++ +E     ++          L  +G +E +
Sbjct: 285 IKDTIELTLQEQMFEAVMMGLRLKEGMNIQLFEDRFHTSVLEVYRAQINKLCHEGKLE-L 343

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             + LRC++ G  +L+S++    
Sbjct: 344 GGNCLRCSEEGFEILNSILLEFM 366


>gi|322835072|ref|YP_004215099.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
 gi|321170273|gb|ADW75972.1| oxygen-independent coproporphyrinogen III oxidase [Rahnella sp.
           Y9602]
          Length = 457

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+EN      + SL +YVH PFC K C +C  N  V R +   E ++     E+     
Sbjct: 39  TAFENAAARYPARSLSLYVHIPFCHKLCYFCGCNKLVTRQQHKAEEYLNVLEKEISHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ ++   I+ ++  +  ++ +  + E+++E +P  +E++    
Sbjct: 99  LFKGRQVSQLHWGGGTPTYLDKAQISRLMGLLRAHFDILPDAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +     A I  AR   F   + DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQLLVNREQDEDFIFALIARARALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++        LF    K  D  LP     + +   T +  
Sbjct: 219 AESFAYTLQRVAELNPDRLSVFNYAHMPK-LFAAQRKIKDADLPGAEEKLKILQETIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TGFGYRFIGMDHFARPDDELAIAQREGKLHRNFQGYTTQGDSDLLGMGVSAISMLGDTYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  +++   V   GHA+     ++++      ++  L     ++  D E    
Sbjct: 338 QN----EKDIKTYYAHVEAQGHALWRGLEMTNDDCLRRDVIKSLICHFELNFADIEQRYD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D+   + L   G +E V  + ++ T RG  ++ ++ 
Sbjct: 394 IRFTDYFADDLALLKPLAEDGLVE-VSGTHIQVTPRGRLLIRNIC 437


>gi|153838826|ref|ZP_01991493.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ3810]
 gi|149747756|gb|EDM58652.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus AQ3810]
          Length = 463

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 168/409 (41%), Gaps = 25/409 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYLHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  +++ + + +T S + EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMNLLRQEFTFSDDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKASFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFAMPDDELAVAQREGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVSLDSDDLLRREVIKQLICNFKLDKKAIESEF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               D   + +LQ          +E V  + +R T RG  ++ ++  + 
Sbjct: 399 RVKFDQYFKEDLQLLQTFINDELVE-VDDNEIRVTLRGRLLIRNICMSF 446


>gi|557233|emb|CAA57578.1| oxygen independent coprophorphyrinogen III oxidase [Escherichia
           coli K-12]
          Length = 457

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAEVNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|225388521|ref|ZP_03758245.1| hypothetical protein CLOSTASPAR_02257 [Clostridium asparagiforme
           DSM 15981]
 gi|225045415|gb|EEG55661.1| hypothetical protein CLOSTASPAR_02257 [Clostridium asparagiforme
           DSM 15981]
          Length = 397

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 111/401 (27%), Positives = 185/401 (46%), Gaps = 47/401 (11%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCDF S  R      E +++  + E++          + ++F GGGTPS++EP+ I  + 
Sbjct: 2   YCDFLSF-RTLAAVHETYVEQLIREIEAEGASCQEYQVVTVFIGGGTPSVLEPELIRDVC 60

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
             + + + V+ + EITIE NP ++  N    YR AG+NR+S+G+QS + + L  LGR H+
Sbjct: 61  LAVRRAFDVAQDAEITIEVNPGTLLQNKLHIYRAAGINRVSIGLQSADNRELENLGRIHS 120

Query: 154 ASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKG 212
             E + +   A    F  ++ DL+  +P QT+  W   L++      +H+S Y L IE G
Sbjct: 121 FEEFLKSFQCARMAGFANINVDLMSGIPGQTLESWRNTLKKVTMLKPEHISAYSLIIEPG 180

Query: 213 TLFYKMH-----------------------------KDGDLVLPSENVAVDLYNLTQSIT 243
           T F+  +                             +     LP E     +Y+LT++  
Sbjct: 181 TPFWDRYGAGIEKTAAKSAPQPGTCPGEAPDRFGLRRRDYPELPDEEEENRIYHLTRTFL 240

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-- 301
           +  G   YEISN++  G    HN+ YW   +Y+G+G GA S +          +E++   
Sbjct: 241 AEQGYERYEISNYARPGFACRHNVGYWTEVEYLGLGLGASSFLGGCRFCNERDLERYLGL 300

Query: 302 ----ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI- 356
               E W + +R       +   LS E + +EF+ +GLR+  GIS  D+    G  LD  
Sbjct: 301 DFAAEGWAERLR------PQFTRLSREARMEEFMFLGLRMIRGISEIDFVATFGVKLDSV 354

Query: 357 --ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                  L + G + R +   L  T+ GM + + V++   +
Sbjct: 355 YGPVIERLVKNGLLRR-EGVWLSLTEWGMDVSNFVLSEFLL 394


>gi|254228536|ref|ZP_04921961.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262392685|ref|YP_003284539.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp. Ex25]
 gi|151938918|gb|EDN57751.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262336279|gb|ACY50074.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp. Ex25]
          Length = 463

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 25/409 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +  + I  ++  + + +T SS+ EI+IE +P  +++    
Sbjct: 104 ALLVGRTVTQLHFGGGTPTFLSEKQITRVMSLLRQEFTFSSDAEISIEVDPREIQITMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKVSFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGAGYQFIGMDHFALPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L S+      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNELRHALWKGVSLDSDDLLRREVIKQLICNFKLDKKAIESEF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               D   + +LQ          +E V  + +  T RG  ++ ++  + 
Sbjct: 399 KVKFDQYFKEDLQLLQTFINDELVE-VDDNEICVTLRGRLLIRNICMSF 446


>gi|237727975|ref|ZP_04558456.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter sp.
           30_2]
 gi|226910232|gb|EEH96150.1| oxygen-independent coproporphyrinogen III oxidase [Citrobacter sp.
           30_2]
          Length = 459

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 41  EAFLKAVARYPERPLSLYVHIPFCHKLCYFCGCNKVVTRQQHKADQYLDVLEQEIIHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMSLLRGNFNFNDDAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T S  
Sbjct: 221 PESFAFTLKRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETISSL 279

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 280 TETGYQFIGMDHFARPDDELAIAQRKGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD--- 336

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 +K  + + + V + G A+     L+ +      ++  L     +     E    
Sbjct: 337 -NYAQNQKELKRYYQQVDEQGDALWRGIALTRDDCIRRDVIKLLICNFRLDYATVEQQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LNFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTPKGRLLIRNIC 439


>gi|241759265|ref|ZP_04757371.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
 gi|241320401|gb|EER56698.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           flavescens SK114]
          Length = 473

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 86/407 (21%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A     TG  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALSLRNTGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + D I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFDMIRKYFQLIPNGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q     +  +   LS   D L+LY        +F    +    V+P     +D+    
Sbjct: 231 PHQNTESIKTTIDTVLSLDPDRLALYHYAHLPH-IFKPQRRIDTNVVPGSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   +      ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAALDAGHLPIMRGYQLNQDDILRRNIIQDLMCRFSLDYQIYE 405

Query: 348 MLAGRNLDIECERNLQRQGFIE-----RVQFSRLRCTQRGMTMLDSV 389
            + G          L+    +E     R++ + L  T +G  ++ ++
Sbjct: 406 SVFGIPFSRHFAAELEDMKQLETLGLVRLKPNSLTVTPKGRFLIRNI 452


>gi|116073337|ref|ZP_01470599.1| hypothetical protein RS9916_32842 [Synechococcus sp. RS9916]
 gi|116068642|gb|EAU74394.1| hypothetical protein RS9916_32842 [Synechococcus sp. RS9916]
          Length = 444

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 120/408 (29%), Positives = 191/408 (46%), Gaps = 32/408 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---------QENFIQSFLTEMQWM 62
            GQ S     YVH PFC ++C YCDF         G            ++     E+   
Sbjct: 22  PGQMSAPRSAYVHIPFCHRRCFYCDFAVVPLGDHAGTPSGTGSGSIRTYLSQLHKEIALA 81

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                   +++++ GGGTPSL+ P  I  +L+ + + +   +  EIT+E +P+S ++++ 
Sbjct: 82  ---PKGPPLATLYIGGGTPSLLTPIQIRDLLEALRRQFGFQAGAEITLEMDPASFDLSDL 138

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-----IFPRMSFDLIY 177
           Q   KAGVNR+SLG QS +++ L  LGR H   +        R+          S DLI 
Sbjct: 139 QALIKAGVNRVSLGGQSFDDRVLEGLGRRHRRGDLQKCCRWLRDGLRDGALRSWSLDLIR 198

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT+  W  +L+ AL+    HLS+Y L +E GT+F    + G+L LP +++AV L  
Sbjct: 199 NLPEQTLEAWSAQLELALTTGAPHLSIYDLAVEPGTVFAWRQQRGELPLPDDDLAVALMT 258

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            T       G   YEISN++  G  S HN  YW    + G G GA S    G        
Sbjct: 259 STSDRLGRAGFCRYEISNYAQPGHASRHNRVYWSGAGWWGFGMGATS-APWGERLARPRT 317

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            +   SWL+  ++  H  + +  +++    D+ L++GLR REG+ ++      G + D  
Sbjct: 318 REGYASWLEEQQRGLHPSL-QHSMAAALPLDDRLLVGLRRREGVQLRQQARSCGWS-DAC 375

Query: 358 CERNL----------QRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
           C+++L            +G +      R R +   GM + + V+  L 
Sbjct: 376 CDQHLPTLEARWQEALNRGLL-IHASGRWRLSDPEGMALSNQVLVELV 422


>gi|320174860|gb|EFW49981.1| Coproporphyrinogen III oxidase, oxygen-independent [Shigella
           dysenteriae CDC 74-1112]
          Length = 457

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVECYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|146313730|ref|YP_001178804.1| coproporphyrinogen III oxidase [Enterobacter sp. 638]
 gi|145320606|gb|ABP62753.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter sp. 638]
          Length = 457

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 174/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   ++++ +   E+     
Sbjct: 39  ADFQQAVVRYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADHYLDALEQEILHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++D +  N+   ++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMDLLRANFRFDADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETITSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TETGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDSDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V   G+A+     L+ +      ++  L     +  +  E    
Sbjct: 338 QN----QKELKQYYQQVDDIGNALWRGIALTRDDCIRRDVIKALICNFRLDFEPVEAQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D++    L + G ++    + ++ T +G  ++ ++ 
Sbjct: 394 LNFADYFAEDLKLLAPLAKDGLVDVTDKA-IQVTPKGRLLIRNIC 437


>gi|257063742|ref|YP_003143414.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
 gi|256791395|gb|ACV22065.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
          Length = 372

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 191/374 (51%), Gaps = 22/374 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFC  +C YCDF +        +   +I++ + +++   +      I +++ GG
Sbjct: 8   ALYIHLPFCKHRCAYCDFTTRAIPKDSPEIGEYIENLVLDIRHASREGFLSQIETVYIGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS I  ++++ +L  +  +  ++  VE ++EANP SV     +     GVNR+S+GVQ
Sbjct: 68  GTPSYIGTKHLSNLLYTLGVSMHLTPEVECSMEANPESVTPELIRDIYALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L+ + R H+ + A  AI +A+  F  +S DL+  +P QT   +   +Q+A+   
Sbjct: 128 SFDDELLKRMDRIHDGARAKEAIAMAQERFDNVSVDLMCGIPGQTPEMFLDSVQQAVDLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLP--SENVAVDLYNLTQSITSAHGLHAYEISNH 256
           V H+S+Y LTIE+ T   +M   G++ +P   E+    +  +  ++    G H YE++++
Sbjct: 188 VKHVSIYPLTIEEHTPLQRMVDAGEIEIPEDHEDREALMMGMAPNVLLPAGFHRYEVASY 247

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HN  YW    Y GIG  A +  +  S R+               +++G+ V 
Sbjct: 248 ALDGYECEHNKKYWTGVPYYGIGVSAVTMTQNDSRRMR--------------KQDGYVVD 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWE-MLAGRNLDIECERNLQRQGFIERVQFSR 375
           +   L+  Q   E LMM +R+ +G+SV + +         ++  R+LQ+   + +++  R
Sbjct: 294 D---LNRRQMMAEDLMMKMRMSQGVSVDEVKAAATLLPKVLQVFRDLQKDNLV-KLEDDR 349

Query: 376 LRCTQRGMTMLDSV 389
            + T  G  + + +
Sbjct: 350 YKPTLGGWLLGNEL 363


>gi|320017067|gb|ADW00639.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 456

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 171/406 (42%), Gaps = 28/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GG TP+ +    I+ ++  + +++    + E +IE +P  +E++    
Sbjct: 99  LFTGRQVSQMHWGG-TPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDH 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 158 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LP+    +D+   T    
Sbjct: 218 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTIRFL 276

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +    
Sbjct: 277 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 335

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 336 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 391

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D E     ++ G +ER +   LR T RG  ++ ++ 
Sbjct: 392 GIRFADYFAEDFELLAPFEQDGLVERNETG-LRVTPRGRLLIRNIC 436


>gi|320449620|ref|YP_004201716.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           scotoductus SA-01]
 gi|320149789|gb|ADW21167.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           scotoductus SA-01]
          Length = 373

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 128/378 (33%), Positives = 187/378 (49%), Gaps = 23/378 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   CPYCDF+  VRR     E +++    E Q + ++  P  + +++ GGG
Sbjct: 3   SLYLHVPFCPTLCPYCDFH-VVRRGPGWVEAYLKRLKEEAQRLYEIH-PEPLKTLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +   +   W + ++ E+T+EANP ++        +  GVNR+SLGVQS
Sbjct: 61  TPSFLRDRELIALFQALP--WRLEADAEVTLEANPGTLNRERMALLKDLGVNRLSLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +E  LRFLGR H    A+ A+ +A     R+S DLI  LP Q   + E +L+ A S  V
Sbjct: 119 FQEAVLRFLGRAHGRRGALKAVEMALEGGFRVSLDLILGLPMQ---EVEKDLKEAASLGV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +EKGT F       D                + I    GL  YEISN +  
Sbjct: 176 GHVSAYTLQLEKGTPFALSGLKED-----PEREAWAMGKAEEILEGAGLVRYEISNFARP 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEK 318
           G E+ HNL YWR G ++ +GP A  +        A      P   WL      G    E 
Sbjct: 231 GEEARHNLAYWRNGFWLALGPSAAGQYPGTGPVYAFRRTNPPLPRWL-----LGEPPQE- 284

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSR 375
           E +S  + A E LM+GLRL+EG+ V+  E   G +L    +     L   GF+E ++  R
Sbjct: 285 EAISPLEHAKESLMLGLRLKEGVDVEAVERRTGLSLWPSLQPAAISLAEAGFLE-IEGLR 343

Query: 376 LRCTQRGMTMLDSVIANL 393
           L+ T+R   +L  V+  L
Sbjct: 344 LKPTRRAFPLLHPVVLKL 361


>gi|209921341|ref|YP_002295425.1| coproporphyrinogen III oxidase [Escherichia coli SE11]
 gi|209914600|dbj|BAG79674.1| coproporphyrinogen III oxidase [Escherichia coli SE11]
 gi|324019791|gb|EGB89010.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           MS 117-3]
          Length = 457

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
               G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LCAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|304972|gb|AAB03001.1| ORF_o459 [Escherichia coli str. K-12 substr. MG1655]
          Length = 459

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 41  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 101 LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 161 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       T+F    K  D  LPS    +D+   T +  
Sbjct: 221 PESFAFTLKRVAXXNPDRLSVFNYAHLP-TIFAAQRKIKDADLPSPQQKLDILQETIAFL 279

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 280 TQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     +     E    
Sbjct: 340 QN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWD 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 396 LHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 439


>gi|153808724|ref|ZP_01961392.1| hypothetical protein BACCAC_03023 [Bacteroides caccae ATCC 43185]
 gi|149128550|gb|EDM19768.1| hypothetical protein BACCAC_03023 [Bacteroides caccae ATCC 43185]
          Length = 335

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 101/338 (29%), Positives = 168/338 (49%), Gaps = 10/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++      I +++FGGGTPS +  ++   I   I K++ +    EIT+EANP  +   
Sbjct: 1   MRKEYLKEEKIETVYFGGGTPSQLGEEDFQQIFKAIQKHYGLEDCREITLEANPDDLSKE 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYAL 179
             Q       NRIS+G+Q+ ++ +L+ L R HNA  A  A+   R      +S DLIY L
Sbjct: 61  YLQMLSALPFNRISMGIQTFDDATLKLLKRRHNARTATEAVRRCREAGYQNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L 
Sbjct: 121 PGETKERWEKDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQICEVDEDSSLEFFTLL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN    G  S HN +YW+   Y+G GP AHS           SI++
Sbjct: 181 IEYLQKAGYEHYEISNFCRPGYYSRHNTSYWKGIPYLGCGPSAHSFNGTTREWNISSIDR 240

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           + +       + G  V E E+L    + +EF++  +R   G  ++  + L G  +   C 
Sbjct: 241 YIKGI-----EEGQRVFETEYLGPTTRYNEFIITTMRTVWGTPIEKLKQLFGIEMWEYCR 295

Query: 360 R---NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +      + G +E  + + LR T+ G+ + DS++++L 
Sbjct: 296 KMATPYLKNGKLEEYEGA-LRLTREGIFISDSIMSDLL 332


>gi|317490540|ref|ZP_07949017.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|316910355|gb|EFV31987.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
          Length = 370

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 22/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCVK+C YCDF +        + E +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVKRCAYCDFATAAVPAGAPEIEAYVEDLSLQIRRKAKEGELGAVETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHVGLAGLSMLLYTLSLSMHLTDEVECTMEANPESLTERMVRDIWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR LGR H++ +A  AI  AR  F  +S DL+  +P Q+   +E  ++ A+   
Sbjct: 128 SFDDDVLRTLGRAHSSDDARRAIEAARTRFENVSVDLMCGIPGQSAESFEASVREAVRLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F      G+L  P ++V      +   +  + G   YE+++++ 
Sbjct: 188 ATHVSVYPLTIEPHTPFDAAVLAGELEEPDDDVEAAHMQIAARVLDSEGFERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A +  +    R+ +              K+G    + 
Sbjct: 248 PGFACRHNIAYWTGVPYLGLGRSAATMTQNAQRRMRV--------------KDGQVTDD- 292

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQFSRL 376
             L   Q   E LM+G+R+  G+S +     A   L        +L+RQG +E  +  R 
Sbjct: 293 --LDPRQMVAEDLMLGMRMTAGVSDEH-AARAAELLPEATTVLADLERQGLVEH-EGGRW 348

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T+RG    + +   L 
Sbjct: 349 RPTERGWLCGNELYGALF 366


>gi|317050143|ref|YP_004117791.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
 gi|316951760|gb|ADU71235.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp.
           At-9b]
          Length = 457

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 168/408 (41%), Gaps = 31/408 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +++ +       L +YVH PFC + C +C  N  V R     + ++     E++    
Sbjct: 39  ADFQHAVARYPERPLSLYVHIPFCHRLCYFCGCNKIVTRQLHKADRYLDVLEQEIRQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   RS++ + +GGGTP+ +  Q ++ ++  +  ++T + +VE++IE +P  +E+     
Sbjct: 99  LFAGRSVTQLHWGGGTPTFLNQQQVSRLVGLLRSHFTFAEDVEMSIEVDPREIELEMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +     + R  + +   A +  AR   F  +S DLIY LP QT
Sbjct: 159 LRSQGFNRLSMGVQDFNKAVQEKVNRVQDEAMIFALVQRAREQGFRSVSLDLIYGLPLQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR ++   D LS++       TLF    K  D  LP     + +   T +  
Sbjct: 219 PESFAFTLQRVIALNPDRLSVFNYAHLP-TLFAAQRKIKDAELPGATQKLAILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           +  G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TGEGYQFIGMDHFARPDDELAVAQRAGKLHR-NFQGYTTQGETDLLGLGVSAISMIGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD----- 345
            +      K  ++W   V + G A+     LS +      ++  L     +         
Sbjct: 337 AQNH----KELKTWYASVEQQGSALWRGLTLSDDDCLRRDVIKALICNFALDYAAIEAQW 392

Query: 346 ---WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              +      +L  +    L   G +E+ +   LR T  G  ++ ++ 
Sbjct: 393 PIVFTRYFAEDL--QLLAPLVADGLVEQHEGG-LRVTGVGRLLIRNIC 437


>gi|254437746|ref|ZP_05051240.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 307]
 gi|198253192|gb|EDY77506.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Octadecabacter antarcticus 307]
          Length = 350

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 146/351 (41%), Positives = 215/351 (61%), Gaps = 8/351 (2%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           V Q  +  +F  E+  + +LT  R ++S+FFGGGTPSL++ + +  IL  + K W ++++
Sbjct: 4   VDQTRWAAAFEKEIDRVAELTSDRVLNSVFFGGGTPSLMDVETVDRILARVQKRWRLAND 63

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +E+T+EANP+S+E   F GYR  GVNR+S+GVQ+L +  LR LGR H+A EA+AA+ +AR
Sbjct: 64  LEVTLEANPTSIEAQRFTGYRDVGVNRVSVGVQALNDTDLRALGRLHSADEALAAVEIAR 123

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             F R+SFDLIYA   QT+ +W+ EL RAL    DHLSLYQLT+E GT F    K G L 
Sbjct: 124 TTFDRVSFDLIYARQNQTVGEWQSELTRALELEPDHLSLYQLTVEDGTSFGDRFKRGLLR 183

Query: 226 -LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            LP+E++  DL+++TQ+     GL AYE+SNH+  G ES HNL YWR GD+ GIGPGAH 
Sbjct: 184 GLPNEDLGADLWDVTQNACVKAGLPAYEVSNHAKRGQESRHNLIYWRSGDWAGIGPGAHG 243

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV- 343
           R+ +   R      K P  W+  V      +     L      +E ++MGLR+ +GI + 
Sbjct: 244 RLTLDGIRHETVCVKSPGGWIAQVESGALGLDVGTALVKADILEERVIMGLRVVDGIEMP 303

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +W         +    +L   G ++ ++ S+L  T +G  +L++VI++L 
Sbjct: 304 AEW-----IANKLNKINDLVDLGHLKNIK-SKLNVTVQGRPVLNAVISHLL 348


>gi|212711633|ref|ZP_03319761.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
           30120]
 gi|212685735|gb|EEB45263.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
           30120]
          Length = 457

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 171/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +YVH PFC K C +C  N  V R K   + +++    E+     
Sbjct: 39  QAFIEATQRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLEVIEKEIIQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ ++   ++ ++  + K +  + + E++IE +P  +E++    
Sbjct: 99  LLKNRTVTQMHWGGGTPTYLDKAQVSHLVGLLKKYFHFAPDAEMSIEVDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +     A I  A+   F   S DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQVLVNREQDEEFIFALIKRAKETGFTSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++    A D LS++        LF    K  D  LP+    +D+   T +  
Sbjct: 219 PESFAFTLKKVAELAPDRLSVFNYAHLPN-LFAAQRKIKDEDLPTAEQKLDILQDTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           ++ G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TSGGYQFIGMDHFARPEDELAVAQREGILHRNFQGYTTQGDCDLLGLGVSAISMLGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 +K  +++   V + GHA+     L+ +      ++  L     ++    E L  
Sbjct: 335 -NYAQNQKDLKTYYAQVEEKGHALWRGLVLTDDDCLRRDVIKTLICNFQLNFAQIEALYP 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+E  + +   G +E  +   ++ T RG  ++ +V 
Sbjct: 394 IDFKTYFKEDLELLKPMAEDGLVEVSETG-IKVTPRGRLLIRNVC 437


>gi|297621212|ref|YP_003709349.1| putative coproporphyrinogen III oxidase [Waddlia chondrophila WSU
           86-1044]
 gi|297376513|gb|ADI38343.1| putative coproporphyrinogen III oxidase [Waddlia chondrophila WSU
           86-1044]
          Length = 370

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 119/382 (31%), Positives = 194/382 (50%), Gaps = 16/382 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISS 73
           G++   +YVH P C KKC YC F  +V   K      + +    E +  R     R+++S
Sbjct: 3   GNSHYSIYVHIPLCTKKCDYCHF--YVVPDKEPYHALLSEGLKLEWEAYRSHFQGRNLAS 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL +P++I  IL          S  EIT+EANP ++     + +  AG+NR+
Sbjct: 61  VYFGGGTPSLFDPRSIEKILS----FLPCCSATEITLEANPENLSEQRIREFADAGINRL 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QSL+++ L  L R H A +AI  I  A       +S DL+Y +P+QT+  W+  L+
Sbjct: 117 SIGIQSLDDKQLELLTRGHGAQKAIDGIEAAFAAGIENISIDLMYDIPEQTLENWKETLR 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++  + HLSLY LT E  T+F+K  +     LPSE  +  +Y       +A+G   YE
Sbjct: 177 LAINLPITHLSLYNLTFEPHTVFFKHRERLKASLPSEETSASMYKTAVETLTANGFIQYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           IS       +S+HN  YW   ++IG+GP A S       R    +      W + +++  
Sbjct: 237 ISAFCKPNRQSVHNSGYWTGREFIGLGPSAFSYWNGSRFRNIARLH----QWHQALKEGK 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             V   E L+      E L + LRL EG+++ ++++   R      +R +  +  +  ++
Sbjct: 293 SPVDYSESLAPAAAQKEKLAIRLRLLEGVNLSEFKI--DRETSDGIKRMIASE--LLALE 348

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              LR T++G+   D+V   + 
Sbjct: 349 KGVLRLTEKGILFYDTVATEII 370


>gi|320332638|ref|YP_004169349.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           maricopensis DSM 21211]
 gi|319753927|gb|ADV65684.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           maricopensis DSM 21211]
          Length = 384

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 112/381 (29%), Positives = 186/381 (48%), Gaps = 24/381 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   CPYCDF+  ++R     E ++     + + +     P  + +++ GGG
Sbjct: 15  HLYVHVPFCPTICPYCDFH-VLQRRAGVVECYLAKLREDARALAAAY-PVDLQTVYLGGG 72

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +A ++D +  +      +E T+E NP +V       +R  G +R S+GVQS
Sbjct: 73  TPSFLRDAELADLVDAVRTHLGW-GALENTLEVNPGTVSAARATHWRALGFDRASVGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L + +L+FLGR H+A  A  A+    +   R+S DLI A+  Q +     +++  +   V
Sbjct: 132 LHDPTLKFLGRPHDAQAARDAVTTLLSGGFRVSGDLITAVEGQPLD---EDVRGLVELGV 188

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y LTIE GT F +          SE+     +  T+++ +  G   YEISN++  
Sbjct: 189 EHVSAYTLTIEPGTPFARRGVQV-----SEDAERLGFERTEALLTGLGFERYEISNYARP 243

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA---ISIEKHPESWLKMVRKNGHAVV 316
           GA S HN  YW    Y+G+GPGA     V              H   WL     +     
Sbjct: 244 GAHSRHNRAYWTNQHYLGLGPGAAGHYPVTGTPGVLGERRTNAHLHEWLAGTDAD----- 298

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
             + ++ E+   + L MGLRLR+G+ + D    +G ++       +++   +G +  +  
Sbjct: 299 -VDVVTPEEFVTDALFMGLRLRDGVDLADLTTRSGVDVAARYAPVIEQHVARGTLT-LDG 356

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +RLR T +G  +L+ VIA+  
Sbjct: 357 TRLRATPQGWWVLNQVIADFL 377


>gi|315922434|ref|ZP_07918674.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
 gi|313696309|gb|EFS33144.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
          Length = 335

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 107/338 (31%), Positives = 175/338 (51%), Gaps = 10/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +       I +++FGGGTPS +E ++   I D I  ++ +S   EIT+EANP  +   
Sbjct: 1   MRKDYLKGEDIETVYFGGGTPSQLEKEDFEQIFDTIRTHYGLSHCQEITLEANPDDLTSE 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +       NRIS+G+Q+ ++ +L+ L R HNA  AI A+H  R   F  +S DLIY L
Sbjct: 61  YLKMLSSLPFNRISMGIQTFDDPTLKLLKRRHNAHTAIEAVHRCREAGFQNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ ++D + L 
Sbjct: 121 PGETKERWENDLRQAVSLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTLL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN    G  S HN +YW+   Y+G GP AHS   +       SI  
Sbjct: 181 IEHLQKAGFEHYEISNFCRPGKYSRHNSSYWKGIPYLGCGPSAHSFDGMTREWNVSSI-- 238

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             ++++K + +N  A  E E+L    + +EF++  +R   G  ++  + + G  +   C+
Sbjct: 239 --DTYIKGIEENSRA-FEIEYLDQTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQ 295

Query: 360 RNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           R      + G +E    + LR T+ G+ + DS++++L 
Sbjct: 296 RMAAPYLKNGKLEEHDGA-LRLTREGIFISDSIMSDLL 332


>gi|307128784|ref|YP_003880800.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Dickeya dadantii 3937]
 gi|306526313|gb|ADM96243.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Dickeya dadantii 3937]
          Length = 457

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 169/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +    +  L +Y+H PFC + C +C  N  V R     + ++     E++    
Sbjct: 39  AAFAQAVARYPNRPLSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDRLALEIRQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + +GGGTP+ +    I+ ++  + + +  +   E+++E +P  +E++    
Sbjct: 99  LFAGRVVTQMHWGGGTPTFLNKTQISRLMGLLRQYFHFAEQAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFASTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR  +   D LS++       +LF    K  +  LP     + +   T    
Sbjct: 219 PDSFAFTLQRVAALRPDRLSVFNYAHLP-SLFAAQRKIKEADLPDAEQKLAILQQTIQSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +A G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V ++GHA+     L+ +      ++  L     +     E   G
Sbjct: 338 QN----QKELKQYYADVEQHGHALWRGLALTRDDCLRRDVIKALICHFQLEFAAIERAYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     + + G ++ +   R++ T +G  ++ ++ 
Sbjct: 394 LSFGEYFREDLALLAPMAQDGLVDIL-PDRIQVTPKGRLLIRNIC 437


>gi|311281670|ref|YP_003943901.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
 gi|308750865|gb|ADO50617.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
          Length = 457

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 175/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  ++     SL +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  AAFQLAVSRYPERSLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDVLEQEILHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+    + EI+IE +P  +E++    
Sbjct: 99  LFNGRHVSQLHWGGGTPTYLNKAQISRLMRLLRENFHFRDDAEISIEVDPREIELDVLDC 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRQEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L R      D LS++       TLF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLSRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           + + + N+  Y      D +G+G  A S +     
Sbjct: 278 THAGYQFIGMDHFARPDDELAVAQRQGVLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V   G+A+     L+ +      ++  L     ++V   E   G
Sbjct: 338 QN----QKELKLYYQQVEDTGNALWRGIALTRDDCIRRDVIKALICNFRLNVTAVEAQWG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 394 LTFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 437


>gi|302757115|ref|XP_002961981.1| hypothetical protein SELMODRAFT_64240 [Selaginella moellendorffii]
 gi|300170640|gb|EFJ37241.1| hypothetical protein SELMODRAFT_64240 [Selaginella moellendorffii]
          Length = 410

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 34/409 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSIS 72
               YVH PFC ++C YCDF                E+++     E+   R      ++ 
Sbjct: 1   PTAAYVHLPFCKRRCHYCDFPIVALGESSSNAGSTMESYVDLVCQEIAAERS-PSRGALQ 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNF-QGYRKAG 129
           ++FFGGGTPSLI    +  I+  +      S +   EI++E +P +   +   +  +  G
Sbjct: 60  TVFFGGGTPSLIPIPLLQRIIQALEAKHGFSRDAPMEISMEMDPGTFSRDYLTEAIQSCG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+SLGVQ+ ++  L+  GR+H   +   +I   ++     S DLI +LP  T+  W  
Sbjct: 120 INRVSLGVQAFDDDLLKLCGRSHCLDDVFQSIEWIKDSLQNWSLDLISSLPHHTLASWRK 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++A++ +  H+S+Y L IE+GT F  ++K G   LPS++ + + + L  S+    G  
Sbjct: 180 SLEQAIAASPAHVSIYDLQIEQGTKFGNLYKPGMDPLPSDDDSAEFFKLGSSMLREAGYD 239

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G +  HNL YW+   Y   G G+ S V     + +  + ++   +++ + 
Sbjct: 240 HYEISNYARKGFQCRHNLVYWKNQGYYAYGLGSTSFVDGKRVKRSKRMREY-AKFVEALA 298

Query: 310 KNGHAVVE------KEFL---SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
                + E       E +   S E +  + +M+ LRL EGI ++ +E   G  L      
Sbjct: 299 AGSPVLPESLEGSRTEAVLPESVEDRILDTVMLALRLAEGIDLRRFEAEFGSELAGILCD 358

Query: 359 -ERNLQRQGFIERVQFSR-----------LRCT-QRGMTMLDSVIANLA 394
                   G +  +  SR            R T   G  + + +I+ L 
Sbjct: 359 GLAEFVASGNVVFLDASRECTAERAGAVYGRLTDPNGFLVSNEIISRLF 407


>gi|163802219|ref|ZP_02196114.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
 gi|159174024|gb|EDP58834.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
          Length = 463

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 170/406 (41%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   +      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  IADYDMACSHYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R+++ + FGGGTP+ +  + I  ++D + + +T SS+ EI+IE +P  +E+    
Sbjct: 104 SLLGKRTVTQLHFGGGTPTFLSEKQITRVMDLLRQEFTFSSDAEISIEVDPREIELTVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRGEGFNRLSIGVQDFNKEVQQLVNREQDEAFIFAMVARAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 TKGSFAKTLEQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIAT 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 283 LTGSGYQFIGMDHFAMPDDELAVAQREGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V ++ HA+ +   L ++      ++  L     +  K  E   
Sbjct: 343 AQN----QKELKKYYAQVNESRHALWKGVSLDADDLLRREVIKQLICNFKLDKKAIESGF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +   + +L+          +E      +R T RG  ++ ++ 
Sbjct: 399 SVEFEQYFKEDLELLQTFIDDELVEMDDNE-IRVTLRGRLLIRNIC 443


>gi|167770386|ref|ZP_02442439.1| hypothetical protein ANACOL_01729 [Anaerotruncus colihominis DSM
           17241]
 gi|167667393|gb|EDS11523.1| hypothetical protein ANACOL_01729 [Anaerotruncus colihominis DSM
           17241]
          Length = 369

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 120/379 (31%), Positives = 183/379 (48%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KCPYCDF S V+      + +I +    ++   Q    + + +++FGGG
Sbjct: 5   ALYVHIPFCESKCPYCDFYS-VKADGDLMDRYIGALEHALKT--QPYKIQRLDTVYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  ++D + + +TVS + EIT+E NP S      +  R AGVNR+S G+QS
Sbjct: 62  TPSALGGRRLTRLMDAVRRTFTVSPDAEITVECNPHSALEPALRALRGAGVNRLSFGMQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ LR LGR H A    +A+  AR   F  +SFDL+ A P QT    +  ++      
Sbjct: 122 ADDRQLRALGRRHTARGFASAVKAARQCGFEHLSFDLMLATPGQTNADIDSAVKLCAQLG 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L IE+GT F   H   +   P E+   DLY       +  G   YEISN + 
Sbjct: 182 AEHVSAYLLKIEQGTPFAARH--IEAECPDEDGQADLYLYAVEALARQGYEQYEISNFAR 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  + HNL YW   +Y+G+GP AHS V            +   ++L+        V + 
Sbjct: 240 DGHVARHNLKYWDGKEYLGVGPAAHSFVNGRRFFF----PRDLAAFLQADEPFSLCVDDG 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRL 376
             L    Q  E++++ LRL EG+  K                  +R   G +       L
Sbjct: 296 --LGGGAQ--EYILLRLRLTEGVVWKTLAARFPGYDARALHEKARRIPDGLLV-SDMRGL 350

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R T +G  + ++VIA L +
Sbjct: 351 RLTPQGFLVSNAVIAQLLL 369


>gi|251791715|ref|YP_003006436.1| coproporphyrinogen III oxidase [Dickeya zeae Ech1591]
 gi|247540336|gb|ACT08957.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya zeae
           Ech1591]
          Length = 457

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 86/405 (21%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +Y+H PFC + C +C  N  V R     + ++     E+     
Sbjct: 39  AAFAQAVARYPHRPLSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDRLALEIHQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ +    I+ ++  + +++  S + E+++E +P  +E++    
Sbjct: 99  LFANRTVTQMHWGGGTPTFLNKAQISRLMALLRRHFHFSEHAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFASTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++        LF    K  D  LP     + +   T    
Sbjct: 219 PDSFAFTLQRVAELRPDRLSVFNYAHLPN-LFAAQRKIKDADLPDAEQKLAILQQTIQSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +A G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V + GHA+     L+ +      ++  L     +   + E   G
Sbjct: 338 QN----QKELKQYYADVEQRGHALWRGLSLTRDDCIRRDVVKALICHFQLEFAEIEQAYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     + + G ++ +   R++ T +G  ++ ++ 
Sbjct: 394 LSFGDYFREDLALLAPMAQDGLVDILA-ERIQVTPKGRLLIRNIC 437


>gi|294670498|ref|ZP_06735378.1| hypothetical protein NEIELOOT_02217 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307777|gb|EFE49020.1| hypothetical protein NEIELOOT_02217 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 468

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 159/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   E    G  +  L +Y+H PFC   C YC  N  + + K   + ++     EM  
Sbjct: 46  EYIRTLELRQAGALNKPLSLYIHIPFCDTICYYCGCNKIITKDKTRADEYLNYLEREMDL 105

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G + ++ + FGGGTP+ +    +  +   I +++ +  + E +IE +P  V   
Sbjct: 106 LAPHLNGKQPLAQLHFGGGTPTFLSDGQLDRVFAMIHRHFNLLPDGEYSIEIDPRKVSRE 165

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +  + + R     E    I  AR   F  +S DLIY L
Sbjct: 166 TVLHLGKLGFNRMSVGIQDFDPKVQQAVNRIQTVEETRTVIEAAREAGFKSVSVDLIYGL 225

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++   +  +   L    D L+LY        +F    +     +PS    +D+    
Sbjct: 226 PHQSLESIKPTIDTVLGLDPDRLALYHYAHLPH-IFKPQRRIDTAAVPSSEEKLDILQYA 284

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +           E     N+  Y      D I IG  A  ++ 
Sbjct: 285 VQRLTEAGYVFIGMDHFAKPDDELSVALREGFLQRNFQGYSTYADCDLIAIGVSAIGKIG 344

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E++   +   + +    ++    L+ +      ++  L  R  +    ++
Sbjct: 345 STYEQN----ERNITDYYAAIDQGRLPIMRGYRLNKDDILRRNIIQDLMCRFALDFHVYQ 400

Query: 348 MLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSV 389
            + G   +      L+      + G ++  + S L+ T +G  ++ ++
Sbjct: 401 DIFGIPFEQYFATELEDLKQMAQLGLVKLHRHS-LQVTPKGRFLIRNI 447


>gi|189464021|ref|ZP_03012806.1| hypothetical protein BACINT_00356 [Bacteroides intestinalis DSM
           17393]
 gi|189438594|gb|EDV07579.1| hypothetical protein BACINT_00356 [Bacteroides intestinalis DSM
           17393]
          Length = 337

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 173/340 (50%), Gaps = 10/340 (2%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M   ++     ++ +I+FGGGTPS +  ++   +   I + +      E+T+EANP  + 
Sbjct: 1   MTERKEYLKGEAVETIYFGGGTPSQLSEEDFKEVFKTIEQVYGTRKATEVTLEANPDDLT 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               Q  R    NRIS+G+Q+ ++ +LR L R HNA++AI A+   R   F  +S DLIY
Sbjct: 61  EEYTQMLRTLPFNRISMGIQTFDDATLRLLNRRHNAAQAIEAVQRCRQAGFQNISIDLIY 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP +T  +W  +LQ+A+S  V+H+S Y L  E+GT  YKM +   +    E+ +++ ++
Sbjct: 121 GLPGETGQRWAQDLQQAVSLNVEHISAYHLIYEEGTPLYKMLQQHSVSQVDEDSSLNFFS 180

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
                 SA G   YEISN    G  S HN +YW+   Y+G GP AHS           S 
Sbjct: 181 TLIDTLSAAGYEHYEISNFCKPGMYSRHNTSYWQGIPYLGCGPSAHSFDGDSREWNVAS- 239

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
                 +L  V +    + E E L +  + +E+++ GLR   GIS ++ +   G  L   
Sbjct: 240 ---LNQYLSSVEQGQR-LHETEQLDTRTRYNEYIITGLRTMWGISTEELKSKFGDRLWEY 295

Query: 358 C---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           C    +     G + ++   RL+ T+ G+ + D ++++L 
Sbjct: 296 CSEQAKPYLENGKL-KLHNDRLKLTKEGIFVSDGIMSDLL 334


>gi|227499814|ref|ZP_03929909.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
 gi|227218118|gb|EEI83386.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
          Length = 381

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 111/377 (29%), Positives = 192/377 (50%), Gaps = 9/377 (2%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G     +G+Y+H PFC KKC YCDF +         E +I++   E+   RQ     +I 
Sbjct: 7   GAKMKKVGLYIHIPFCEKKCYYCDF-TAFAHLDRWIEPYIKNLKRELSLYRQSL-TLTID 64

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+ GGGTPS I+ + I+ I+  + K        E ++E NP+S+  +  + Y   GV R
Sbjct: 65  TIYIGGGTPSYIDEKYISEIVSEVRKFP--CEIKEFSLECNPNSINKDKLKLYEDLGVTR 122

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           ISLGVQS ++  L  +GRNH    AI  I + +N    +SFDL+  LP Q  +  + +L 
Sbjct: 123 ISLGVQSFDDLVLNNIGRNHKKDIAIRDIEMIKNFDFDLSFDLMLNLPGQDFSSIKKDLA 182

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +   DH+S Y L ++KG+ FY +++ G L L  ++  VD++N      +   L+ YE
Sbjct: 183 YVKALDPDHISWYSLILDKGSRFYALNEKGKLELMDDDREVDIFNYIVDELARLNLNRYE 242

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G ES+HN  YW    Y+  G GA   +    +  A +       + KM+++  
Sbjct: 243 ISNFAKPGKESIHNKKYWDIEGYLACGLGASGFLSNVRYSNASNFV----IYEKMLKEGK 298

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +V +EF+S +++  E+++  LR   GI+++++      +   + ++ + +    +   
Sbjct: 299 KPIVSREFISQKEREKEYIIFKLRQTRGINLEEFRKEFKADFLKKYKKAIDKFIDDDFFV 358

Query: 373 FSRLR-CTQRGMTMLDS 388
                  T++GM + + 
Sbjct: 359 IDDCFSFTKKGMELSNE 375


>gi|238759871|ref|ZP_04621027.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia aldovae
           ATCC 35236]
 gi|238701932|gb|EEP94493.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia aldovae
           ATCC 35236]
          Length = 464

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 46  TAFQQAVKCYPLRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQRAA 105

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 106 LFVGRQVSQMHWGGGTPTYLNKTQITHLMNLLRENFDFLPGAEQSIEVDPREIELDVLDH 165

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
               G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 166 LHAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 225

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LPS    +D+   T S  
Sbjct: 226 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQRLDILQHTISFL 284

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 285 TESGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGESDLLGLGVSAISMLGDSYA 344

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  +++   V + G+A+     ++ +      ++  L     IS +  E   G
Sbjct: 345 QN----EKDLKTYYTCVEQRGNALWRGLAMTEDDCLRRDVIKTLICNFQISYQPVEQQYG 400

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D       ++ G + R     +R T RG  ++ ++ 
Sbjct: 401 INFADYFVEDFALLAPFEQDGLVVRDDKG-IRVTPRGRLLIRNIC 444


>gi|189501789|ref|YP_001957506.1| hypothetical protein Aasi_0352 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497230|gb|ACE05777.1| hypothetical protein Aasi_0352 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 375

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 14/381 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       +   + +   E+   +       I+SI+ GGG
Sbjct: 3   GIYIHIPFCKQACHYCDF--HFSTNMRQKSEMLAAIQQELILQKDYLNQVEINSIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + IA +L  I + +     +EIT+EANP  +++       K G+NR+S+G+Q+
Sbjct: 61  TPSLLEVEEIAALLIDIRQIFRCKEGLEITLEANPDDIDLKKLLALLKIGINRLSIGIQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L++L R H+ ++A  ++ +A    F   + DLIYA+P QT    + +L  AL + 
Sbjct: 121 FHNNLLQYLNRAHDTTKATQSLEIALQAGFNNFNLDLIYAIPGQTKEMLKRDLLTALQFK 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S Y LTIE+ T+F +  + G + +  + +A   ++L     + +G + YE+SN   
Sbjct: 181 PTHISAYCLTIEQKTVFGRWLETGKIEVVQDEIAAKHFHLLVDTLTDNGYNHYEVSNFGL 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               + HN NYW+ G Y+G+GPGAHS           +  +    +++ ++         
Sbjct: 241 PEYHAQHNTNYWKRGSYLGVGPGAHSYNGTSRQYNIANNTR----YIQSIQAGIIPST-I 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI----ECERNLQRQGFIERVQFS 374
           E L  +   +E++M  LR + G  +         +L        E  + RQ  +  +Q +
Sbjct: 296 EILQPQDHINEYIMTSLRTQWGCDMALLRNNYQYDLQATHPSYLELLINRQ--LAYIQEN 353

Query: 375 RLRCTQRGMTMLDSVIANLAV 395
            L  T  G  + D + A+L +
Sbjct: 354 VLILTVDGKLIADKIAADLFI 374


>gi|126343210|ref|XP_001376343.1| PREDICTED: similar to Radical S-adenosyl methionine domain
           containing 1 [Monodelphis domestica]
          Length = 537

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 145/394 (36%), Positives = 223/394 (56%), Gaps = 19/394 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
                GS S  +YVHWP+C K+C YC+FN ++ R ++ ++      + E   + +L+G +
Sbjct: 108 AQPPPGSRSAALYVHWPYCEKRCYYCNFNKYIPR-RLDEDAMRTCLVQEATTLLKLSGVQ 166

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I+S+FFGGGTPSL  P  +A +L+ IA+N  + +  E+T+EANP+S + +    ++ AG
Sbjct: 167 RINSVFFGGGTPSLASPYTVASVLEAIAQNTHLPAKAEVTLEANPTSSKASRLAAFQVAG 226

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWE 188
           +NRIS+G+QSL++  L+ LGR H+ASEA+  +  AR ++P R S DL++ LP Q +  W 
Sbjct: 227 INRISIGIQSLDDTELQLLGRTHSASEALGTLEEARRLYPGRTSVDLMFGLPGQQVEPWL 286

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +LQ  LS   DH+SLYQLT+E+GT  +   + G L  P    A  +Y   + +    G 
Sbjct: 287 GQLQELLSRCDDHVSLYQLTLERGTTLFAQVQRGTLPSPDPETAAQMYQDGREVLREAGF 346

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESW 304
             YE+SN +   A S HN  YW+ G YIG+GPGAH R       GS R A      P++W
Sbjct: 347 RQYEVSNFARNEALSSHNWTYWQGGQYIGVGPGAHGRFVPQGDGGSLREARIQTLEPDNW 406

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLD 355
           +K V   GH   ++  L   +  +E L +GLR   GI+ + W             G + +
Sbjct: 407 MKEVSVFGHGTRKRVPLGELELLEEVLALGLRTDIGITHQHWLQFEPHLSLWEVFGESEE 466

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +   R LQ QG +  +    LRC+ +G+ +LD++
Sbjct: 467 V---RELQSQGLL-LLDPRGLRCSWKGLAVLDTI 496


>gi|120601369|ref|YP_965769.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris DP4]
 gi|120561598|gb|ABM27342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfovibrio vulgaris DP4]
          Length = 497

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 180/349 (51%), Gaps = 9/349 (2%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            ++++  +E+       G   + +IFFGGGTPSL+ P  +A ILD + + ++V+   EI+
Sbjct: 125 AYVETLFSELALWGDRLGNAPVETIFFGGGTPSLLPPHVVAAILDRVHRTFSVAPGAEIS 184

Query: 110 IEANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           +EANP S+      +    AGVNR+SLGVQ+L++  L  +GR H A +AI A + AR+  
Sbjct: 185 LEANPESLSNRQQARALYDAGVNRLSLGVQALDDALLHLMGRPHRARDAIRAFNAARDAG 244

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  +S D I+ LP Q + QW  +L+  +    +HLS Y LT+E+GT      + G + LP
Sbjct: 245 FTNISLDFIWGLPGQRLRQWLDQLREVVRLRPEHLSCYGLTLEEGTPLTADVESGSIALP 304

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            E     ++          G   YEISN + +G +  HNL YW   DY+G+GP A S + 
Sbjct: 305 VEREQAAMFMQGAERLEEAGYLQYEISNFARMGFQCHHNLGYWEGRDYLGLGPSATSTID 364

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                +  +      +W + VR       + E L    +  E +M+ LR   G+ VK + 
Sbjct: 365 G----LRWTNPYDHGAWHESVRTGRIG-ADAERLDLTVRVLELVMLRLRTTRGLRVKAYR 419

Query: 348 MLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L GR+   D +   +L  +  + R++   LR T+ GM + +S++    
Sbjct: 420 ELTGRDFLRDHKPLVHLLHRNGLVRIRDGYLRLTRNGMLVSNSILERFF 468



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 21 VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
          +Y+H PFC +KC YC F+S     + G     ++  T       +T   + +S    G  
Sbjct: 3  LYIHVPFCRRKCRYCAFHSLPLIGEGGTSPAPEALQTP-HADTAITAGPTAASTALAGVA 61

Query: 81 PSLIEPQNI 89
          P     Q I
Sbjct: 62 PVTPSAQAI 70


>gi|325831426|ref|ZP_08164680.1| coproporphyrinogen dehydrogenase [Eggerthella sp. HGA1]
 gi|325486680|gb|EGC89128.1| coproporphyrinogen dehydrogenase [Eggerthella sp. HGA1]
          Length = 370

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 22/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCVK+C YCDF +        + E +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVKRCAYCDFATAAVPAGAPEIEAYVEDLSLQIRRKAKEGELGAVETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHVGLAGLSMLLYTLSLSMHLTDEVECTMEANPESLTERMVRDIWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR LGR H++ +A  AI  AR  F  +S DL+  +P Q+   +E   + A+   
Sbjct: 128 SFDDDVLRTLGRAHSSDDARRAIEAARTRFENVSVDLMCGIPGQSAESFEASAREAVRLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LT+E  T F      G+L  P ++V      +   +  + G   YE+++++ 
Sbjct: 188 ATHVSVYPLTVEPHTPFDAAVLAGELEEPDDDVEAAHMQIAARVLDSEGFERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A +  +    R+ +              K+G    + 
Sbjct: 248 PGFACRHNIAYWTGVPYLGLGRSAATMTQNAQRRMRV--------------KDGQVTDD- 292

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQFSRL 376
             L S Q   E LM+G+R+  G+S +     A   L        +L+RQG +E  +  R 
Sbjct: 293 --LDSRQMVAEDLMLGMRMTAGVSDEH-AARAAELLPEATTVLADLERQGLVEH-EGGRW 348

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T+RG    + +   L 
Sbjct: 349 RPTERGWLCGNELYGALF 366


>gi|268592301|ref|ZP_06126522.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rettgeri DSM 1131]
 gi|291312082|gb|EFE52535.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rettgeri DSM 1131]
          Length = 457

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 88/405 (21%), Positives = 169/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+           L +YVH PFC K C +C  N  V R K   + +++    E+     
Sbjct: 39  NAFVQATQRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLKVIEKEIIQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + +GGGTP+ ++   ++ ++  + K++  + +VE++IE +P  +E++    
Sbjct: 99  LLKGRIVTQMHWGGGTPTYLDKAQVSHLVGLLKKHFHFADDVEMSIEVDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +     A I  A+   F   S DLIY LPKQT
Sbjct: 159 LRHEGFNRLSMGVQDFNKEVQVLVNREQDEEFIFALIKRAKETGFTSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++    + D LS++        LF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKKVAELSPDRLSVFNYAHLPN-LFAAQRKIKDADLPSAEQKLDILQDTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TRDGYQFIGMDHFARPEDELAVAQREGVLHRNFQGYTTQGDCDLLGLGVSAISMLGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 +K  +++   V + G A+     L+ +      ++  L     +     E +  
Sbjct: 335 -NYAQNQKDLKTYYAQVEEQGQALWRGLVLTDDDCLRRDVIKTLICNFQLDFAQIEAIYP 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+E  + +   G +E      ++ T +G  ++ ++ 
Sbjct: 394 IDFKSYFKEDLELLKPMAEDGLVEMTDKG-IKVTPQGRLLIRNIC 437


>gi|330977076|gb|EGH77034.1| HemN family oxidoreductase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 291

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 107/265 (40%), Positives = 160/265 (60%), Gaps = 5/265 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLQGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS EE  L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++
Sbjct: 151 QSFEESKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A  HLS YQLT+E  T+F+        VLP +++  D+    Q + + HG   YE+S +
Sbjct: 211 LAPTHLSWYQLTLEPNTVFWNQPP----VLPEDDILWDIQETGQQLLATHGYAQYEVSAY 266

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPG 281
           +  G  + HNLNYW +GD+IGIG G
Sbjct: 267 AQPGKPARHNLNYWAFGDFIGIGAG 291


>gi|315926093|ref|ZP_07922293.1| coproporphyrinogen III oxidase, anaerobic [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315620537|gb|EFV00518.1| coproporphyrinogen III oxidase, anaerobic [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 390

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 19/394 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +    +GVYVH PFCV+KC YCDF S  R        +  + + E++        R  +S
Sbjct: 3   KDRQGIGVYVHIPFCVQKCRYCDFCSS-RENAAAIGRYFDALVAEIRADAAAADRRV-AS 60

Query: 74  IFFGGGTPSLIEPQNIALI---LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ GGGTPS ++   IA +   L+         +++E TIE NP+S   +    YR+ G 
Sbjct: 61  LYVGGGTPSFVDAAQIARVVAALEARYAFSLRDADIEATIEVNPASAMADKLAAYRRMGF 120

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G QS +++ L  +GR H A++  A +  A+   F  +S D+I+ LP+Q +     
Sbjct: 121 NRLSVGCQSTDDRLLALMGRAHRAADFFATVDAAKAAGFENISADVIFGLPEQHLADVAA 180

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++  L   + HLS Y L +E GT+F +  ++G L LP E+    +Y   + + +  G+ 
Sbjct: 181 TMRDLLVLPLTHLSAYSLIVEPGTVFDRWEREGRLALPPEDEERAMYETVRRMAADAGMA 240

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK------VGSHRVAISIEKHPES 303
            YEI+N +  G  S HN  YW +  Y G G GA S V+              +      +
Sbjct: 241 PYEIANFARPGYASRHNSRYWSFEPYRGYGLGAASFVRPAALPLGDGDCRRFANTSDLAA 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CER 360
           +       G A+ E   L   +   +F+ +GLR   G+    ++ L G +   E      
Sbjct: 301 YG---LAPGRALAEDHRLFLAEAKGDFMFLGLRRTAGVRDAVFQKLFGASFFEEYGAAIA 357

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L+RQG +E V    LR ++RG  + + V     
Sbjct: 358 GLRRQGLVE-VAGDALRLSRRGYDLANQVFMAFV 390


>gi|323516492|gb|ADX90873.1| putative oxidase; coproporphyrinogen III oxidase [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 351

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 14/351 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ++ ++++ + + +   ++   RSI S+F GGGTPSLI  +  A + + +        + E
Sbjct: 11  EQTYLKALVADFETQVEMAQGRSIHSVFIGGGTPSLISAKGYAWLFEQLKSLLNFEDDCE 70

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP ++E + F GY +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR  
Sbjct: 71  ITLEANPGTLEHDPFAGYLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARQA 130

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F R++ DL++ LP+QT+ Q   +L+ A+     H+S YQLTIE  T+F++       VL
Sbjct: 131 GFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGATHISWYQLTIEPNTVFFR----TQPVL 186

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P + V  D+    ++   A+G   YE+S        S HNLNYW++GDY+ IG GAH +V
Sbjct: 187 PQDEVLEDIQEQGEAYLKANGFINYEVSAWRKE-QPSAHNLNYWQFGDYLAIGAGAHGKV 245

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       + P+ +L  V      + + E   +++   EF+M  LRL +G+  + +
Sbjct: 246 TRPDGVYRFQKTRLPKDYLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELY 302

Query: 347 EMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           E   G +LD   +       R+  +E     RL CT++G   L+SV+    
Sbjct: 303 EQRTGLSLDDLNDLLTSLRSRELLVE--DSDRLACTEQGHIFLNSVLEEFL 351


>gi|220915384|ref|YP_002490688.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219953238|gb|ACL63622.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 379

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 12/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVH+P+C  +CPYCDF +       G   + ++   E+          S+ S++
Sbjct: 2   ARPFGVYVHYPYCTHRCPYCDF-AVTTERPPGAGRYARAVRAELGLRAPAFEGLSLRSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +   +  +L  +   + +    E+T+E NP S +    + +R AGVNRIS+
Sbjct: 61  LGGGTPSLWDADELRDVLAAVRDRFGLPGGAEVTLEVNPESSDPARLEAWRAAGVNRISV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS +   L  LGR H    A  AI  A      +S DLIY   + ++     + +RA+
Sbjct: 121 GAQSFDPGVLAKLGRRHGPERAEQAIREAAAAIGNVSVDLIYGARRSSVETARRDAERAV 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                H+S Y LT++   +       +M ++G L LPS+  A+      ++     GL  
Sbjct: 181 EAGAVHVSAYALTLDPDVMAEEVPLARMRREGRLPLPSDEDALAQAAALRAALRRLGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES+HN  YWR+  Y+G+G GA+   +  +  V     +   +WL  V  
Sbjct: 241 YEISNFARPGRESVHNGLYWRHESYLGLGAGAYGCRRGDAGSVRYGNLRDAGAWLATVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                 E++ + +    +E LM+ LR R+G  +                 +L R     R
Sbjct: 301 GRLPTAEEDRIDARADRNERLMLALRTRDGAPLAALG-----PAQTREAADLVRHRLAVR 355

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
              + L  T RG+ +  ++   L 
Sbjct: 356 RDGA-LVLTSRGLDLHSAISERLF 378


>gi|187250477|ref|YP_001874959.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Elusimicrobium minutum Pei191]
 gi|186970637|gb|ACC97622.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Elusimicrobium minutum Pei191]
          Length = 365

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 178/375 (47%), Gaps = 23/375 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC +KC YC F+S+  +  +  E +I + + EM   +         +++ GGG
Sbjct: 3   SIYIHIPFCAQKCFYCAFSSYPDKLSLSGE-YINALIKEMSGHKNFNA----QTLYIGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TPS++  +N+  +   + +N+  V + +E T EANP S+        +K G NR+S+G+Q
Sbjct: 58  TPSVLSEENLEKLFKAVEENFGPVKNFLESTFEANPESLTEEKIILLKKYGFNRLSMGLQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+ LGR H+    I +   AR   F  ++ DLI   P Q +  ++ ++   L+ 
Sbjct: 118 SSNDDILKNLGRIHDRRMFIKSYSDARSMGFDNINIDLIAGCPSQNLENFKEDISFVLTL 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H S+Y + I +GT F+K     +   P + +  ++     +         YEISN S
Sbjct: 178 NPEHFSVYGMEISEGTKFFK-----EGYAPDDALVKEMLLYAHNFLPKRAYSHYEISNFS 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN NYW  GDY+G+G  A   +          + K    ++  + K       
Sbjct: 233 KHGFESVHNNNYWLGGDYLGLGCAAAGYLNGTRSSNTDDLNK----YINNMEKGLGVKDF 288

Query: 318 KEFLSSEQQADEFLMMGLRLREGISV-KDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           +E L  +++  E  M+ LR  EG+ +  +     G+ +D    R L         +   +
Sbjct: 289 EEKLEGKKKTGESAMIALRRLEGVKLTSEISGYFGQEIDALVSRRLL------TKENGCI 342

Query: 377 RCTQRGMTMLDSVIA 391
           + +++G+   + V +
Sbjct: 343 KLSEQGLFFANKVFS 357


>gi|302775376|ref|XP_002971105.1| hypothetical protein SELMODRAFT_64239 [Selaginella moellendorffii]
 gi|300161087|gb|EFJ27703.1| hypothetical protein SELMODRAFT_64239 [Selaginella moellendorffii]
          Length = 410

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 34/409 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSIS 72
               YVH PFC ++C YCDF                E+++     E+   R      ++ 
Sbjct: 1   PTAAYVHLPFCKRRCHYCDFPIVALGESSSNAGSTMESYVDLVCQEIAAERS-PSRGALQ 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNF-QGYRKAG 129
           ++FFGGGTPSLI    +  I+  +      S +   EI++E +P +   +   +  +  G
Sbjct: 60  TVFFGGGTPSLIPIPLLQRIIQALEAKHGFSRDAPMEISMEMDPGTFSRDYLAEAIQSCG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +NR+SLGVQ+ ++  L+  GR+H   +   +I   ++     S DLI +LP  T+  W  
Sbjct: 120 INRVSLGVQAFDDDLLKLCGRSHCLDDVFQSIEWIKDSLQNWSLDLISSLPHHTLASWRK 179

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++A++ +  H+S+Y L IE+GT F  ++K G   LPS++ + + + L  S+    G  
Sbjct: 180 SLEQAIAASPAHVSIYDLQIEQGTKFGNLYKPGMDPLPSDDDSAEFFKLGSSMLREAGYD 239

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G +  HNL YW+   Y   G G+ S V     + +  + ++   +++ + 
Sbjct: 240 HYEISNYARKGFQCRHNLVYWKNQGYYAYGLGSTSFVDGKRVKRSKRMREY-AKFVEALA 298

Query: 310 KNGHAVVE------KEFL---SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
                + E       E +   S E +  + +M+ LRL EGI ++ +E   G  L      
Sbjct: 299 AGSPVLPESLEGSRTEAVLPESVEDRILDTVMLALRLAEGIDLRRFEAEFGSELAGMLCD 358

Query: 359 -ERNLQRQGFIERVQFSR-----------LRCT-QRGMTMLDSVIANLA 394
                   G +  +  SR            R T   G  + + +I+ L 
Sbjct: 359 GLAEFVASGNVVFLDASRECTAERARAVYGRLTDPNGFLVSNEIISRLF 407


>gi|296105440|ref|YP_003615586.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059899|gb|ADF64637.1| coproporphyrinogen III oxidase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 457

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/404 (22%), Positives = 172/404 (42%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++  +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     L
Sbjct: 40  DFQQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R +S + +GGGTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++     
Sbjct: 100 FTGRHVSQLHWGGGTPTYLNKAQISRLMALLRSNFHFNDDAEISIEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R      D LS++       TLF    K  D  LPS    +D+   T +  +
Sbjct: 220 ESFAFTLKRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETITSLT 278

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHR 292
             G     + + +           E + + N+  Y      D +G+G  A S +     +
Sbjct: 279 ETGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + + + V + G+A+     L+ +      ++  L     +   D E     
Sbjct: 339 N----QKELKLYYQQVDEKGNALWRGIALTRDDCIRRDVIKALICNFRLDFSDVESQWDL 394

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D++    L + G ++  + + +  T +G  ++ ++ 
Sbjct: 395 HFSDYFAEDLKLLAPLAKDGLVDVSENA-IEVTPKGRLLIRNIC 437


>gi|261401166|ref|ZP_05987291.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica ATCC 23970]
 gi|269208838|gb|EEZ75293.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica ATCC 23970]
          Length = 470

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 158/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A  +      +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 48  EYLEALHSRGADASNKPLSLYIHIPFCNTICYYCGCNKIITKDKGRADAYIEYLEKEMKL 107

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + + I K + +  + E +IE +P  V   
Sbjct: 108 LAPHLGGRHQLAQLHFGGGTPTFLSDNQLERVFEMIRKYFQLIPDGEYSIEIDPRKVSRE 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 168 TVLKLGKLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 228 PYQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPGSEEKLDMLQYC 286

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +    E        L   N+  Y      D + IG  +  ++ 
Sbjct: 287 VQTLTERGYVFIGMDHFAKPDDELSVALEKGLLQRNFQGYSTYADCDLVAIGVSSIGKIG 346

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    V+    L+ +      ++  L  R  +  + +E
Sbjct: 347 NTYSQN----ERDIDAYYAAIDEGRLPVMRGYQLNQDDILRRNIIQDLMCRFALDYRVYE 402

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++G   D            L   G +   +   L  T +G  ++ ++
Sbjct: 403 DISGTPFDRYFKDELADLEKLADLGLVSLNKQG-LTVTPKGRFLIRNI 449


>gi|293400546|ref|ZP_06644691.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305572|gb|EFE46816.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 369

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 26/380 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDF    R +    E ++ +   E+     +     +++++ GGG
Sbjct: 4   AAYLHVPFCQDICAYCDFF-RCRYHVELAEKWLAAMAKEL----TIKKLSPLTTMYIGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++PQ +  +L  +          E TIEAN  S+        ++ GVNRISLGVQS
Sbjct: 59  TPSALQPQQLETLLSLLVPYTK--EVNEYTIEANVESLTDEKLDICQRFGVNRISLGVQS 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS-Y 197
           L+   L  + R+H + + +A I          +S D+IY LPKQ++  WE +L   +S +
Sbjct: 117 LQPSLLNQMHRHHTSEDVLACIKRIHAHGIHNISIDMIYGLPKQSLAMWEEDLHTIVSSF 176

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+SLY LTIE  + F +      +    E++  D+Y+L  ++   +G   YEISN +
Sbjct: 177 PIQHISLYGLTIEPHSEFGRQ----GIQNIDEDIEADMYDLAITLLQQYGFQQYEISNFA 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                SLHN  YWRY D+ GIG GA  + K G +    ++E + +     V         
Sbjct: 233 KPKYASLHNQVYWRYEDFYGIGCGASGKDKRGRYENTRNLETYLQQGASSV--------- 283

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFS 374
            E L ++ Q  E +MM LR+++GIS + +    G+++       +++Q   G +  V   
Sbjct: 284 YEKLDTKAQMFEMIMMSLRMKQGISRQAFFERFGKDISEVYGSIIEKQKEKGLL-LVDEE 342

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           ++  ++RG  +L+ V+    
Sbjct: 343 KIWASERGFHLLNDVLVEFL 362


>gi|323493188|ref|ZP_08098318.1| coproporphyrinogen III oxidase [Vibrio brasiliensis LMG 20546]
 gi|323312535|gb|EGA65669.1| coproporphyrinogen III oxidase [Vibrio brasiliensis LMG 20546]
          Length = 462

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 87/406 (21%), Positives = 159/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 ALLQGRKVTQLHFGGGTPTFLTKAQISRLMAILRGEFFFEGDAEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 223 TKQSFAETLKQVLEMKPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPVAEEKMAILQDTIAT 281

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGS 290
            +        + + +    E   +  N     N+  Y      D +G G  A S +    
Sbjct: 282 LTNAEYQFIGMDHFAQPDDELAVAQRNGVLHRNFQGYTTQGEADLVGFGVSAISMIGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNDQRHALWKGVALDSDDLLRREVIKQLICNFKLDKTKIESEF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+E  +       +E V    +R T RG  ++ ++ 
Sbjct: 398 KVAFNDYFKEDLELLQTFINDELVE-VDDKEIRVTLRGRLLIRNIC 442


>gi|212550789|ref|YP_002309106.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
 gi|212549027|dbj|BAG83695.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Azobacteroides pseudotrichonymphae genomovar. CFP2]
          Length = 371

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 18/380 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  +C YCDF S    +   + +++     E++  +      +I +I+FGGG
Sbjct: 4   GIYIHIPFCKNRCIYCDFFS--TTHLNYKTHYVNVLCNELEQRKDYLNKHNIGTIYFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TPSL+   +   I   I +N+ +    + EITIEANP  V             NRISLGV
Sbjct: 62  TPSLLSFPDFEKIFRTIQENFLIEGFEDKEITIEANPEDVNDRFLTLINCFSFNRISLGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  ++ L FLGR H+A  A+ A+   +   F  ++ DLIY LP Q++  WE  +Q+A+S
Sbjct: 122 QSFRDEELIFLGRKHDAYSAVKAVENCQKKGFLNINVDLIYGLPGQSLKAWETTVQQAIS 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+S Y LT E+GT    M + G +    E  +++++ +        G   YEISN 
Sbjct: 182 LNISHISAYHLTYEQGTKLDCMQRQGLIRPVDELESLEMFEILIDKLLTAGFEHYEISNF 241

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S+HN+ YW    Y+G+G  AHS          +   +   ++L           
Sbjct: 242 ASPTYYSMHNIGYWNGSHYLGVGASAHSYNGKTRQWNRVDSGR-IFNYL----------P 290

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFS 374
           E E ++ +   ++F++  +R  +GI + +  +L G    + C    ++     + ++  +
Sbjct: 291 EIEIMNDKTTYNDFIITRIRTMKGIDLDELLLLCGEEKKLYCLNRAEKYMNNHLLQIISN 350

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L+ T++G+ + D ++ +L 
Sbjct: 351 HLQLTRKGLFVSDGIMCDLL 370


>gi|148683981|gb|EDL15928.1| radical S-adenosyl methionine domain containing 1, isoform CRA_a
           [Mus musculus]
          Length = 442

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 136/386 (35%), Positives = 213/386 (55%), Gaps = 19/386 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             S    +YVHWP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S
Sbjct: 35  SASTRAALYVHWPYCEKRCSYCNFNKYIPRG-VEEGTVRNCLVTEARTLLRLSGVQRVES 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S        +  AGVNR+
Sbjct: 94  VFFGGGTPSLASPHTVAAVLEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRL 153

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QSL++  L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ
Sbjct: 154 SIGLQSLDDAELQLLGRTHSASDALRTLAEARLLFPGRVSVDLMLGLPAQKVEPWLQQLQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L +  DHLSLYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE
Sbjct: 214 KLLYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYE 273

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMV 308
           +SN +  GA S HN  YW+ G Y+GIGPGAH R       G  R A      P++W+K V
Sbjct: 274 VSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGGHTREARIQTLEPDNWMKEV 333

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECE 359
              GH   +   L   +  +E L MGLR   G++ + W+            G + ++E  
Sbjct: 334 TLFGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQFEPQLTLWDVFGASKEVEEL 393

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTM 385
                      + +  LRC+  G+ +
Sbjct: 394 LAQGL----LLLDYRGLRCSWEGLAV 415


>gi|71480062|ref|NP_001013399.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Mus musculus]
 gi|81862486|sp|Q5SUV1|RSAD1_MOUSE RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|56206623|emb|CAI25588.1| radical S-adenosyl methionine domain containing 1 [Mus musculus]
 gi|187951397|gb|AAI39277.1| Radical S-adenosyl methionine domain containing 1 [Mus musculus]
 gi|223460753|gb|AAI39275.1| Radical S-adenosyl methionine domain containing 1 [Mus musculus]
          Length = 442

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 136/386 (35%), Positives = 213/386 (55%), Gaps = 19/386 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             S    +YVHWP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S
Sbjct: 35  SASTRAALYVHWPYCEKRCSYCNFNKYIPRG-VEEGTVRNCLVTEARTLLRLSGVQRVES 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S        +  AGVNR+
Sbjct: 94  VFFGGGTPSLASPHTVAAVLEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRL 153

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QSL++  L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ
Sbjct: 154 SIGLQSLDDAELQLLGRTHSASDALRTLAEARLLFPGRVSVDLMLGLPAQKVEPWLQQLQ 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L +  DHLSLYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE
Sbjct: 214 KLLYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYE 273

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMV 308
           +SN +  GA S HN  YW+ G Y+GIGPGAH R       G  R A      P++W+K V
Sbjct: 274 VSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGGHTREARIQTLEPDNWMKEV 333

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECE 359
              GH   +   L   +  +E L MGLR   G++ + W+            G + ++E  
Sbjct: 334 TLFGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQFEPQLTLWDVFGASKEVEEL 393

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTM 385
                      + +  LRC+  G+ +
Sbjct: 394 LAQGL----LLLDYRGLRCSWEGLAV 415


>gi|37522654|ref|NP_926031.1| coproporphyrinogen III oxidase [Gloeobacter violaceus PCC 7421]
 gi|35213655|dbj|BAC91026.1| coproporphyrinogen III oxidase [Gloeobacter violaceus PCC 7421]
          Length = 408

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 108/383 (28%), Positives = 175/383 (45%), Gaps = 16/383 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
               Y+H PFC  +C YCDF   V    +  E +++  L E+      +G + + +++FG
Sbjct: 36  PTAAYLHIPFCRTRCRYCDFAVTVGTEGL-IEKYVRFLLAEIALTP--SGGQGLDTVYFG 92

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPSL+  + +  +L  + +++   + + EI++EANP + +     GYR  GVNR+S+G
Sbjct: 93  GGTPSLLSVEQLGRVLAALREHFGGFAPDAEISLEANPGTFDCKKLTGYRSLGVNRLSVG 152

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ +   L   GR+H   E  +++   R   F   + DLI+ LP Q++  WE  L   L
Sbjct: 153 VQAFQSHLLALCGRSHGLEEVYSSVATVRAAGFENFNLDLIFGLPHQSLADWEFSLSEVL 212

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                HLSLY L +E+ T F +    G   LP ++  V +Y          G   YEI+N
Sbjct: 213 RLEPTHLSLYDLILEEETPFGREFLGGQAPLPGDDDTVAMYLRACERLQGQGYRQYEIAN 272

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G    HN  YW    Y GIG GA   V+       +   +    +   V       
Sbjct: 273 FARPGFRCRHNRVYWDNRPYYGIGNGATGYVRGAR----VERPRRLHDYFAWVEGGEFPA 328

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQ 372
                +  E++  + L++GLRL EG+ V       G       +E  ++   +G +    
Sbjct: 329 --GAPVMPEEELADTLLLGLRLLEGVEVNALVQRFGHLAVTHQLEALQSALERGLLILYD 386

Query: 373 FSRLRCT-QRGMTMLDSVIANLA 394
             RLR +   G+ + + V   L 
Sbjct: 387 -GRLRLSVPEGLLLSNEVFTLLV 408


>gi|16329864|ref|NP_440592.1| coproporphyrinogen III oxidase [Synechocystis sp. PCC 6803]
 gi|2493814|sp|P73245|Y1917_SYNY3 RecName: Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein sll1917
 gi|1652349|dbj|BAA17272.1| oxygen independent coprophorphyrinogen III oxidase [Synechocystis
           sp. PCC 6803]
          Length = 412

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/402 (27%), Positives = 178/402 (44%), Gaps = 28/402 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
               Y+H PFC ++C YCDF   V  +           ++++   E+    Q    + + 
Sbjct: 9   PTAAYIHIPFCRQRCFYCDFPIAVTGFQSLTLDGWVGEYVEAVCREIA--GQQHQGQPLQ 66

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTPSL+    +  IL  + +   ++ + EI+IE +P + +    QGY+  G+NR
Sbjct: 67  TVFFGGGTPSLLPITGLEKILLAVDQYLGIAPDAEISIEIDPGTFDQVQLQGYKNLGINR 126

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQ+ ++  L   GR+H   +   A+  +A+      S DLI  LP+QT   W   L
Sbjct: 127 FSLGVQAFQDNLLALCGRHHRRRDIDQALTAIAKENIENWSLDLITGLPEQTAADWHSSL 186

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL+    H+S Y L +E  T+F K  + G L +P    + D Y   Q + +  G H Y
Sbjct: 187 TLALAAGPKHISCYDLVLEPQTVFDKWEQRGKLAVPPPERSADFYRHGQEVLTQAGFHHY 246

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           EISN+   G +  HN  YWR   Y G+G GA S +         +   + + WL+     
Sbjct: 247 EISNYGRPGHQCRHNQIYWRNLPYYGLGMGATSYIDGKRFGRPRTRNGYYQ-WLESWLNQ 305

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE--MLAGRNLDIECERNLQRQGFIE 369
           G  +   E +S  +   E LM+GLRL  G++           +   +    +   + ++E
Sbjct: 306 GCPIP-GERVSPLENLLESLMLGLRLTAGVTWAQLPSVNQTEKAKILATLTSFGDRRWLE 364

Query: 370 RVQFS---------------RLRCT-QRGMTMLDSVIANLAV 395
                               R   T   G+   + +++ L  
Sbjct: 365 FYGEDNQMLAPNQTTTETVQRFCFTDPEGILYSNQILSALFA 406


>gi|163753112|ref|ZP_02160236.1| coproporphyrinogen III oxidase [Kordia algicida OT-1]
 gi|161326844|gb|EDP98169.1| coproporphyrinogen III oxidase [Kordia algicida OT-1]
          Length = 343

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 178/347 (51%), Gaps = 9/347 (2%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            + +   E+Q  +       + +I+FGGGTPS++  + I  IL  + +N++VSS+ EIT+
Sbjct: 1   MLNALQKELQLRKAELAETPVETIYFGGGTPSMLSLEEIQAILQTVYENYSVSSDPEITL 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           EANP  V     +   K+ +NR+S+G+QS  E  L+ + R HN+ EA   + +A   F  
Sbjct: 61  EANPDDVTEAKIKELAKSPINRLSIGIQSFYEAHLQLMNRAHNSEEAKKCLEIATKYFEN 120

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           ++ DLIY +P  TM QW+  L+   ++ ++H+S Y LT+E  T   K  + G +   SE 
Sbjct: 121 ITIDLIYGVPNMTMEQWKTNLETVFNFGINHISSYALTVEPKTALEKFIRQGKVKDVSEE 180

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
            ++  +N   S T   G   YEISN       S HN +YW+   YIGIGP AHS      
Sbjct: 181 ASLAHFNELVSATKKQGFVHYEISNFGKPNYFSKHNTSYWKGATYIGIGPSAHSFDTKTR 240

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                +  K    ++K + +N   +   E LS + Q +E++M GLR   GIS+   +   
Sbjct: 241 SWNVSNNTK----YIKSIEENILPLT-IEKLSKDDQYNEYVMTGLRTIWGISLGYIKENF 295

Query: 351 GRNLDIECERNLQRQGFIERV---QFSRLRCTQRGMTMLDSVIANLA 394
           G +  ++  +++ +Q   E         ++ TQ+G  + D + A+  
Sbjct: 296 GESY-LQHTKHIAQQHLEENTIQCSAEAIKTTQKGKFLCDGIAADFF 341


>gi|291612894|ref|YP_003523051.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
 gi|291583006|gb|ADE10664.1| oxygen-independent coproporphyrinogen III oxidase [Sideroxydans
           lithotrophicus ES-1]
          Length = 467

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 88/395 (22%), Positives = 166/395 (42%), Gaps = 26/395 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  L +YVH PFC   C YC  N  V +     + +I+  + E+     L G  R +  +
Sbjct: 59  SRPLSLYVHIPFCNTLCFYCACNKVVTKDFSKADQYIRYLIKEIGMQAALLGKERRVEQL 118

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+ +    +  ++  I KN+ +  + E +IE +P  V         + G NRIS
Sbjct: 119 HFGGGTPTFLSDDELRQVMGAIRKNFQLVEDGEYSIEIDPRKVSDATVALLGELGFNRIS 178

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  + +  + + R  + +E +  I  AR N F  +S DLIY LPKQTM  ++  L +
Sbjct: 179 IGVQDFDPEVQKAVNRIQSEAETLQVIKAARANGFKSVSIDLIYGLPKQTMAGFKATLDK 238

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++   D LS+Y       TLF    +  D  LP+    +D+  L  +  +  G     +
Sbjct: 239 VIAANPDRLSIYNYAHMP-TLFKPQRRIHDEDLPAPQTKLDILKLAVNTLTDAGYVYIGM 297

Query: 254 SNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           +   + N+  Y      D I +G  +  +V     +      +  
Sbjct: 298 DHFAKPDDELAVAQRQGRLHRNFQGYSTHSDCDLIAVGVSSIGKVGPTYSQNF----REL 353

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           E +   +  +   ++    L+++      ++  L     IS + + +    + D      
Sbjct: 354 EQYYDALDNDILPIMRGMELNADDLVRRAIIQALMCHFEISKESFNISYLIDFDHYFATE 413

Query: 362 L------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           L      +++G + ++    +  T +G  ++ ++ 
Sbjct: 414 LKELAEYEKEGLL-KLSPQWISVTPKGRMLIRNIC 447


>gi|167750752|ref|ZP_02422879.1| hypothetical protein EUBSIR_01730 [Eubacterium siraeum DSM 15702]
 gi|167656187|gb|EDS00317.1| hypothetical protein EUBSIR_01730 [Eubacterium siraeum DSM 15702]
          Length = 364

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 116/375 (30%), Positives = 174/375 (46%), Gaps = 24/375 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KCPYCDF S           +  + +  ++            +++FGGG
Sbjct: 4   GLYIHIPFCLSKCPYCDFYSVAFDSDTAN-RYKDAVIRNLRCYLSQDENLRFDTVYFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+  + I  I+D I     ++S+ EIT+EANP   + N     +   VNRIS G+QS
Sbjct: 63  TPILL-WREICDIMDEIQPY--IASDAEITVEANPCCTDENALCSLKTHNVNRISFGLQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ LGR HN+     A+ +A    F  +S D++  +P QT       +    S  
Sbjct: 120 GNDNELKALGRKHNSKVGADAVKMAYKAGFYNISGDIMLGIPLQTSDSLIETISYMTSLP 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L IE  T F K H    L+LP E+   ++Y  T    S  G   YEISN + 
Sbjct: 180 LSHISAYMLKIEPDTPFSKRH----LILPDEDGYANIYLETVERLSDKGFRQYEISNFAK 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GAES HNL YWR  +Y+GIGP AHS        V   +    ES ++            
Sbjct: 236 TGAESRHNLRYWRCEEYLGIGPAAHSYFNGERFAVGRDLRAFIESEVQPA---------- 285

Query: 319 EFLSSEQQ--ADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-NLQRQGFIERVQFSR 375
             ++  +    +E+ M+ LRL EG+     E   G   D   ++  L       +     
Sbjct: 286 -IITERECGDYEEWAMLKLRLSEGLDFDTAEKRFGVTKDDILKKCRLIPDDL-YKTDDKT 343

Query: 376 LRCTQRGMTMLDSVI 390
           +  T +G  + ++VI
Sbjct: 344 ISLTPKGFLVSNAVI 358


>gi|46581460|ref|YP_012268.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46450882|gb|AAS97528.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311235113|gb|ADP87967.1| oxygen-independent coproporphyrinogen III oxidase [Desulfovibrio
           vulgaris RCH1]
          Length = 497

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 182/349 (52%), Gaps = 9/349 (2%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            ++++  +E+       G  ++ +IFFGGGTPSL+ P  +A ILD + + ++V+   EI+
Sbjct: 125 AYVETLFSELALWGDRLGNATVETIFFGGGTPSLLPPHVVAAILDRVHRTFSVAPGAEIS 184

Query: 110 IEANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI- 167
           +EANP S+      +G   AGVNR+SLGVQ+L++  L  +GR H A +AI A + AR+  
Sbjct: 185 LEANPESLSNRQQARGLYDAGVNRLSLGVQALDDALLHLMGRPHRARDAIRAFNAARDAG 244

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  +S D I+ LP Q + QW  +L+  +    +HLS Y LT+E+GT      + G + LP
Sbjct: 245 FTNISLDFIWGLPGQRLRQWLDQLREVVRLRPEHLSCYGLTLEEGTPLTADVESGSIALP 304

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            E     ++          G   YEISN + +G +  HNL YW   DY+G+GP A S + 
Sbjct: 305 VEREQAAMFMQGAERLEEAGYLQYEISNFARMGFQCHHNLGYWEGRDYLGLGPSATSTID 364

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                +  +      +W + VR       + E L    +  E +M+ LR   G+ VK + 
Sbjct: 365 G----LRWTNPYDHGAWHESVRTGRIG-ADAERLDLTVRVLELVMLRLRTTRGLRVKAYR 419

Query: 348 MLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            L GR+   D +   +L  +  + R++   LR T+ GM + +S++    
Sbjct: 420 ELTGRDFLRDHKPLVHLLHRNGLVRIRDGYLRLTRNGMLVSNSILERFF 468



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 21 VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
          +Y+H PFC +KC YC F+S     + G     ++  T       +T   + +S    G  
Sbjct: 3  LYIHVPFCRRKCRYCAFHSLPLIGEGGTSPAPEALQTP-HADTAITAGPTAASTALAGVA 61

Query: 81 PSLIEPQNI 89
          P     Q I
Sbjct: 62 PVTPSAQAI 70


>gi|219870722|ref|YP_002475097.1| coproporphyrinogen III oxidase [Haemophilus parasuis SH0165]
 gi|219690926|gb|ACL32149.1| coproporphyrinogen III oxidase [Haemophilus parasuis SH0165]
          Length = 455

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 86/405 (21%), Positives = 170/405 (41%), Gaps = 27/405 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E+++   L
Sbjct: 38  DFKAAAARYPNKPLSLYVHIPFCHKLCYFCACNKIITRHQHKVDIYLDYLEKEIKYRADL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ I +GGGTP+ ++      ++  + K++ VS N EI+IE +P  +E+   +  
Sbjct: 98  FKDRTVTQIHWGGGTPTYLDEDQSLRLMAMLRKHFNVSDNAEISIEMDPREIELEMLEHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R+ G NRIS+G+Q   ++  + + R  +     A +  AR   F   + DLIY LPKQT+
Sbjct: 158 REIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRARELGFTSTNIDLIYGLPKQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R +    D +S++       + F    K  D +LP+    +++   T     
Sbjct: 218 ESFMFTLERVIQLNPDRMSVFNYAHLP-SRFAAQIKIKDEMLPAPETKLEILQKTIETLG 276

Query: 245 AHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
             G     + + +    E         LH  N+  Y      D +G+G  A S +     
Sbjct: 277 NAGYKFIGMDHFAKPNDELASAQAKGELHR-NFQGYTTQEDADLLGLGVSAISLLGDSYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + +   V   G A+ +   ++ +      ++  L     +    +E    
Sbjct: 336 QNH----KELKQYYTEVEMRGIALHKGLSMTKDDCLRRDVIKALICNFKLEYDRFEQDYQ 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 392 IDFNQYFAEDLSLLAPLAKDGLLEIGEKG-IVVSPRGRLLIRNIC 435


>gi|291530742|emb|CBK96327.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium siraeum 70/3]
          Length = 364

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 116/373 (31%), Positives = 174/373 (46%), Gaps = 20/373 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KCPYCDF S           +  + +  +++           +++FGGG
Sbjct: 4   GLYIHIPFCLSKCPYCDFYSVAFDSDTAN-RYKDAVIRNLRYYLSQNENLRFDTVYFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+  + I  I+D I     ++S+ EIT+EANP   + N     +   VNRIS G+QS
Sbjct: 63  TPILL-WREICDIMDEIQPY--IASDAEITVEANPCCTDENALCSLKAHNVNRISFGLQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ LGR HN+     A+ +A    F  +S D++  +P QT       +    S  
Sbjct: 120 GIDNELKALGRRHNSKVGADAVKMAYKAGFDNISGDIMLGIPLQTSDSLIETISYMTSLP 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L IE  T F K     +L+LP E+   ++Y  T    S  G   YEISN + 
Sbjct: 180 LSHISAYMLKIEPDTPFAKK----ELILPDEDGYANIYLETVERLSDKGFRQYEISNFAK 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HNL YWR  +Y+GIGP AHS        V   +    ES ++        + E+
Sbjct: 236 PGMESRHNLRYWRCEEYLGIGPAAHSYYNGERFAVGRDLRAFIESEVQPA-----VITER 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-NLQRQGFIERVQFSRLR 377
           E        +E+ M+ LRL EG+     E   G   D    +  L       +     + 
Sbjct: 291 ECGD----YEEWAMLKLRLSEGLDFDTAEKRFGITKDDILNKCRLIPDDL-YKTDDKTIS 345

Query: 378 CTQRGMTMLDSVI 390
            T +G  + ++VI
Sbjct: 346 LTPKGFLVSNAVI 358


>gi|257791400|ref|YP_003182006.1| oxygen-independent coproporphyrinogen III oxidase [Eggerthella
           lenta DSM 2243]
 gi|257475297|gb|ACV55617.1| oxygen-independent coproporphyrinogen III oxidase [Eggerthella
           lenta DSM 2243]
          Length = 370

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 107/378 (28%), Positives = 186/378 (49%), Gaps = 22/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCVK+C YCDF +        + E +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVKRCAYCDFATAAVPAGAPEIEAYVEDLSLQIRRKAKEGELGAVETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHVGLAGLSMLLYTLSLSMHLTDEVECTMEANPESLTERMVRDIWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR LGR H++ +A  AI  AR  F  +S DL+  +P Q+   +E  ++ A+   
Sbjct: 128 SFDDDVLRTLGRAHSSDDARRAIEAARTRFENVSVDLMCGIPGQSAEGFEASVREAVRLG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F      G+L  P ++V      +   +  + G   YE+++++ 
Sbjct: 188 ATHVSVYPLTIEPHTPFDAAVLAGELEEPDDDVEAAHMQIAARVLDSEGFERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HN+ YW    Y+G+G  A +  +    R+ +              K+G    + 
Sbjct: 248 PGFACRHNIAYWTGVPYLGLGRSAATMTQNAQRRMRV--------------KDGQVTDD- 292

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQFSRL 376
             L   Q A E LM+G+R+  G+S +     A   L        +L+RQG +E  +  R 
Sbjct: 293 --LDPRQMAAENLMLGMRMTAGVSDEH-AARAAELLPEATTVLADLERQGLVEH-EGGRW 348

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T+RG    + +   L 
Sbjct: 349 RPTERGWLCGNELYGALF 366


>gi|169824480|ref|YP_001692091.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 29328]
 gi|167831285|dbj|BAG08201.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 29328]
          Length = 367

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 183/379 (48%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF S + +     + + +    E+   +       I +I+ GGG
Sbjct: 3   GIYIHIPFCDYKCNYCDF-STMTKQYNRVDEYFRLLQKEITIYKN--PNEKIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++ + I  I + + K++ +    E TIE NP  V     + Y+  GV+RISLGVQS
Sbjct: 60  TPNLVDSKYIKEIYNLLNKSFDL-QIKEFTIECNPEFVTKEKIESYKSIGVDRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++  RFLGR H  ++ + +  + +     +S DLI+  P QT+   + +L      A 
Sbjct: 119 FNDEYNRFLGRGHKVTDVLKSFEIIKQYIDNISIDLIFGFPNQTLESLDNDLNYIRKLAP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK ++D +    + ++  ++Y            + YEISN +  
Sbjct: 179 NHVSWYNMILEPGTKFYKDYEDINR---NNDIEYEMYVKICKGLE--DYNHYEISNFAKD 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G  +   +    +           ++ + +      +   E
Sbjct: 234 DFESKHNKIYWKDENYYGFGLSSSGYINQKRYTNEF----FYPNYKRKIINEQKPINFSE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRL 376
            +  E++  EF++  +RL+EG+ +K++    G +L   +        ++  +  ++ + L
Sbjct: 290 NIDLEKREFEFIITNMRLKEGLDLKEYNQKFGIDLYKNNKNMIDKWIKERLLT-LENNHL 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + ++   ++ V
Sbjct: 349 SFTDQGFFISNTFFIDILV 367


>gi|295099654|emb|CBK88743.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium cylindroides T2-87]
          Length = 357

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 183/377 (48%), Gaps = 25/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDF   +      +  ++   + E++            +++FGGG
Sbjct: 3   AVYLHVPFCDSICAYCDFCRIITNEDT-KSKWMAQIIEEIKQK----NIHKADTLYFGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  +    I          + + E T+E NP S+++   Q Y+K GVNRISLGVQ+
Sbjct: 58  TPSSLTCEQFKKIASL------FNVSKEFTVECNPESLDLEKIQLYKKLGVNRISLGVQT 111

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L+ + R H   +    I L +      +S DL+YALP+Q++   + +L+  L   
Sbjct: 112 FNDRLLKVINRKHRKEDIFQVIQLLKENGIDNISIDLMYALPEQSLEDIKKDLEIFLDLD 171

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS+Y L IE+ ++F +     +L    E++  D+Y L        G   YEIS+   
Sbjct: 172 IKHLSIYSLQIEENSIFGRQ----NLKPVDEDIEADMYELICRTMEKAGYIHYEISSFCK 227

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HNL YW+  D+IG+G GA  +     +    S++ + ES         +  + +
Sbjct: 228 PGYHSKHNLAYWQDEDFIGLGCGASGKENNVRYDNTRSLKTYIES-------GANPYIYE 280

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E  + + +A   +MM LR   G+ ++ W     ++   + +  L++   + +++   L  
Sbjct: 281 E--TQKDKAFNAIMMALRTTFGLDIQKWNQRYDQDFIKKYQSILEKYHDVLKLENGILYP 338

Query: 379 TQRGMTMLDSVIANLAV 395
           ++  M +L++++ +  +
Sbjct: 339 SREAMEILNTILVDFLL 355


>gi|78185113|ref|YP_377548.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CC9902]
 gi|78169407|gb|ABB26504.1| coproporphyrinogen III oxidase, anaerobic [Synechococcus sp.
           CC9902]
          Length = 400

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 120/396 (30%), Positives = 188/396 (47%), Gaps = 27/396 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEMQW-MRQLTGP 68
            +     Y+H PFC ++C YCDF         R  +      IQS+L  +   +      
Sbjct: 4   PAPPRSAYLHIPFCHRRCYYCDFAVVPLGDRARGGQGPGSASIQSYLQVLHHEIASAPKG 63

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +S+++FGGGTPSL+ P  IA +L  +   + +    EIT+E +P+S + +  +     
Sbjct: 64  PPLSTVYFGGGTPSLLSPAQIAELLGQLRLRYGLQEGAEITLEMDPASFDQHQLKEVLAF 123

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQT 183
           GVNRISLG QS ++  L  LGR H + + + A     +          S DLI +LP QT
Sbjct: 124 GVNRISLGGQSFDDGVLEQLGRRHRSKDLLEACEWMDDAHRSGELSSWSLDLIQSLPGQT 183

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W  +L +A++    H+S+Y L++E GT+F+     GDL LP ++V+ DL  LT S  
Sbjct: 184 LEDWCHQLNQAIACGSPHISIYDLSVEPGTVFHHRLHHGDLTLPDDDVSCDLMALTSSRL 243

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           S  G   YEISNH+  G  S HN  YW    + G G GA S    G         +   +
Sbjct: 244 SEAGFRRYEISNHARPGHASRHNRVYWSGSGWWGFGMGATS-APWGERVARPRTREAYSA 302

Query: 304 WLKMVR--KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECER 360
           WL   R  + G  V            DE L++GLR  EG+ +  +++ + +     E   
Sbjct: 303 WLNDPREPEGGFGVP----------LDEQLLVGLRREEGMDLTAFDLSSAQITSLEERWA 352

Query: 361 NLQRQGFIERVQFSRLRC-TQRGMTMLDSVIANLAV 395
              ++G ++R +  R       GM + + V+  + +
Sbjct: 353 PFLKEGLMQR-RAGRWCLKDPEGMALSNRVLLEVVL 387


>gi|328907150|gb|EGG26916.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium sp. P08]
          Length = 350

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 109/357 (30%), Positives = 174/357 (48%), Gaps = 17/357 (4%)

Query: 46  VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
           V    ++++   E++    + G     +S+IFFGGGTP+++ P  +  ++D I   W   
Sbjct: 4   VAVAGYLKAVHRELELAADVLGAGQPPVSTIFFGGGTPTMLSPVQLGELVDHIRTLWGTD 63

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
            N EIT EANP ++      G  KAG+NR+S+G+QS +E  L  L R H    A+    L
Sbjct: 64  LNAEITTEANPETLSGEVLAGLLKAGINRLSMGMQSADEFVLTVLDRRHRPGRAVEMAQL 123

Query: 164 ARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           AR   F  +S DLI+  P +++  W   L  AL+   DH+S Y L IE+GT      + G
Sbjct: 124 ARQMGFDDVSLDLIFGAPGESLDSWWHSLDVALTAEPDHISAYSLIIEEGTRLAGRIRRG 183

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL----GAESLHNLNYWRYGDYIGI 278
           +L +  E+   D Y L + I +  G   YE+SN +           HN+ YW   D+ G+
Sbjct: 184 ELPMTDEDDLADKYLLAERILTEAGYVNYEVSNWARPRNGRDHRCRHNMAYWLGHDWWGV 243

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           GPGAHS +            KHP ++  ++R+    V   E L   Q+ +E +++ LRL 
Sbjct: 244 GPGAHSHIAGTR----WWNVKHPATYRSLLRERKLPVDGYEVLDDVQRHEETVLLRLRLS 299

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G+ + D        ++      +  QG    ++  RL     G  + D +IA+L +
Sbjct: 300 DGLPMTDLPR-----VERMRAAKVVEQGL-GTIEEGRLVLNLSGRMVADRIIADLLI 350


>gi|260886569|ref|ZP_05897832.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas sputigena ATCC 35185]
 gi|260863712|gb|EEX78212.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas sputigena ATCC 35185]
          Length = 354

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 105/354 (29%), Positives = 178/354 (50%), Gaps = 11/354 (3%)

Query: 48  QENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
              + ++   E+     +     ++ +++ GGGTP+ +   ++  ++  + +++ ++   
Sbjct: 1   MSRYREALCREIAAQGCRCLQEGAVRTVYIGGGTPTALAADDLLAVICSVRESFHLTGAE 60

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           E T+EANP +V+    +  R+AGVNR+S GVQS  +  L  +GR H A EA  A+ +A+ 
Sbjct: 61  EFTVEANPGTVDAKLLERLREAGVNRLSFGVQSFSDALLAAIGRIHTAREAEDAVRMAQK 120

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              R+S DL+Y LP QT++  +  + RA +  + H+S+Y L +E GT F +M + G L L
Sbjct: 121 AGFRVSLDLMYGLPGQTLSDLKDSVARAAALGIGHISVYGLAVEDGTPFARMEEAGRLHL 180

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P+++   D+Y+   +     G   YEISN++  G ES HNL YW+   YIG+G  AHS  
Sbjct: 181 PTDDKCGDMYDYITAELPRLGYRRYEISNYARAGEESRHNLAYWQDVSYIGLGAAAHSYW 240

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNG--HAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
               H      E+    ++  +   G      E+E  S E   +EF  + LR  +GI  K
Sbjct: 241 ----HGQRTENEQDLCRYIACIEGEGGLSLAREEEPCSRESHIEEFAFLALRTADGIDKK 296

Query: 345 DWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +      ++     E    LQ  G +E    S +R T++GM   + V     +
Sbjct: 297 RFRGTFASDVHEVYGEVIARLQAAGLVEETAVS-IRLTEQGMKFGNRVFEAFLL 349


>gi|291519621|emb|CBK74842.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Butyrivibrio fibrisolvens 16/4]
          Length = 370

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 175/370 (47%), Gaps = 25/370 (6%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           Q  +  +  TE++++ +      IS+I+ GGGTPS +    +  I+  + +++ V    E
Sbjct: 2   QRRYTAALCTEIKYVAKTHPGCIISTIYVGGGTPSWLSEDLMDSIITTVKQSFKVDPLAE 61

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I++E NP ++       YR  G+NR+S+G+QS  +  L+ LGR H+ +  +    L R  
Sbjct: 62  ISVECNPGTLSAEKLNVYRSIGINRLSIGLQSANDDELKELGRIHDYNRFLHTFDLVRKA 121

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK------ 220
            F  ++ D++  LP QT+ + E  L        +H+S Y L IEKGT FY  +K      
Sbjct: 122 GFDNVNVDIMTGLPHQTVEKLEKTLSSVTMLRPEHISAYSLIIEKGTPFYDKYKFDAVKQ 181

Query: 221 ---DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
                   LP++  A  LY  T       G   YEISN++  G    HN+ YW    Y+G
Sbjct: 182 QAGMETEDLPTDEEAYHLYKFTMEYLENKGYKRYEISNYARGGKICRHNVGYWDRVPYLG 241

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV---------VEKEFLSSEQQAD 328
           +G GA S            I K+ E+       NG AV           +E LS +   +
Sbjct: 242 VGLGAASLFDNVRTSNMRDIYKYVET--SEAIANGKAVSSELSSPYFDSEEVLSKKDAME 299

Query: 329 EFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           EF+ +GLR  +G++  D+  + G +++         L+ QGF+E  +  RL  T  G+ +
Sbjct: 300 EFMFLGLRKIDGVARSDFFNMFGIDIEAIYGPIITALRNQGFMEAKE-GRLFLTDIGIDV 358

Query: 386 LDSVIANLAV 395
            + V++   +
Sbjct: 359 SNQVLSKFLL 368


>gi|329118052|ref|ZP_08246765.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327465940|gb|EGF12212.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 469

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 158/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y++       G  +  L +Y+H PFC   C YC  N  + + K   + ++     E + 
Sbjct: 47  EYIATLAQRGAGALNKPLSLYIHIPFCDTICYYCGCNKIITKDKTRADEYLDYLEREAEL 106

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  +   I +++T+    E +IE +P  V  +
Sbjct: 107 LAPHLNGKNPLAQLHFGGGTPTFLSDGQLDRVFAMIRRHFTLLGEGEYSIEIDPRKVSRD 166

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 167 TVHHLGRLGFNRMSVGIQDFDPKVQAAVNRIQSVEETRNVIEAAREAGFKSVSVDLIYGL 226

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+   +  +   LS   D L+LY        +F    +     +PS    +D+    
Sbjct: 227 PHQTLDSIKPTIDTVLSLDPDRLALYHYAHLPH-IFKPQRRIDTAAVPSSEEKLDILQYA 285

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               S  G     + + +           E L   N+  Y      D + +G  A  ++ 
Sbjct: 286 VRRLSEAGYVFIGMDHFAKPNDELAIALREGLLQRNFQGYSTYADCDLVALGVSAIGKIG 345

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E++   +   +      V+    L+ +      ++  L  R  +  +D+E
Sbjct: 346 GTYEQN----ERNITDYYAALDAGRLPVMRGYRLNRDDILRRNIIQDLMCRFALDYRDYE 401

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              G              R +++ G +     S L  T +G  ++ ++
Sbjct: 402 AAFGIPFARYFAAELADLRQMEQLGLVALTPRS-LAVTPKGRFLIRNI 448


>gi|156936146|ref|YP_001440062.1| coproporphyrinogen III oxidase [Cronobacter sakazakii ATCC BAA-894]
 gi|156534400|gb|ABU79226.1| hypothetical protein ESA_04045 [Cronobacter sakazakii ATCC BAA-894]
          Length = 457

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/404 (22%), Positives = 161/404 (39%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            +   +       L +YVH PFC K C +C  N  V R +   + ++     E+     L
Sbjct: 40  DFARAVARYPDRPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R +S + +GGGTP+ +    I+ ++  +  N+  + + EI+IE +P  +E++     
Sbjct: 100 FAGRRVSQLHWGGGTPTYLSKAQISRLMGLLRANFRFNDDAEISIEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
              G  R+S+GVQ   ++  R + R  +     A I  AR   F   + DLIY LPKQT 
Sbjct: 160 HAEGFRRLSMGVQDFNKEVQRLVNREQDEDFIFALIKRAREVGFTSANIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR      D LS++       TLF    K     LPS    +D+   T    +
Sbjct: 220 ESFAFTLQRVAELNPDRLSVFNYAHLP-TLFAAQRKIKKADLPSAQQKLDILQQTIQSLT 278

Query: 245 AHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHR 292
             G     + + +    E   +  N     N+  Y      D +G+G  A S +     +
Sbjct: 279 HAGYQFIGMDHFAKPDDELAIAQRNGVLHRNFQGYTTQGDTDLLGLGVSAISMIGDCYAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD----WEM 348
                +K  + + + V + G A+     L+ +      ++  L     +   +    W +
Sbjct: 339 N----QKELKRYYQAVDEQGSALWRGLELTRDDCIRRDVIKALICNFRLDFAEVEKAWSL 394

Query: 349 LAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                   D++    L + G ++      +  T +G  ++ +V 
Sbjct: 395 RFADYFAEDLQLLAPLAKDGLVDVNARG-ITVTAKGRLLIRNVC 437


>gi|225075367|ref|ZP_03718566.1| hypothetical protein NEIFLAOT_00372 [Neisseria flavescens
           NRL30031/H210]
 gi|224953287|gb|EEG34496.1| hypothetical protein NEIFLAOT_00372 [Neisseria flavescens
           NRL30031/H210]
          Length = 473

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 157/407 (38%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALSLRNMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + D I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFDMICKYFQLIPNGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q     +  +   LS   D L+LY        +F    +    V+P     +D+    
Sbjct: 231 PHQNTESIKTTIDTVLSLNPDRLALYHYAHLPH-IFKPQRRIDTNVVPGSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   +      ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAALDAGHLPIMRGYQLNQDDILRRNIIQDLMCRFSLDYQIYE 405

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRC-----TQRGMTMLDSV 389
            + G          L+    +E +   RL+      T +G  ++ ++
Sbjct: 406 SVFGIPFSRYFAAELEDMKQLETLGLVRLKPHSLTVTPKGRFLIRNI 452


>gi|86146589|ref|ZP_01064911.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|218708180|ref|YP_002415801.1| coproporphyrinogen III oxidase [Vibrio splendidus LGP32]
 gi|85835646|gb|EAQ53782.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|218321199|emb|CAV17149.1| Oxygen-independent coproporphyrinogen III oxidase [Vibrio
           splendidus LGP32]
          Length = 463

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  VADYDMACTQYPDRPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVIEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I  ++  + + +  +++ EI+IE +P  +E++   
Sbjct: 104 SLLNGRKVTQLHFGGGTPTFLTKTQITRLMGILREEFNFTADAEISIEVDPREIELDVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    IA +  A    F   + DLIY LPKQ
Sbjct: 164 HLRNEGFNRLSIGVQDFNKEVQKLVNREQDEEFIIAMVQRATELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T   
Sbjct: 224 TQALFAETLKQVLEMKPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPEAKEKMAILQDTIET 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D IG G  A S V    
Sbjct: 283 LTGAGYQFIGMDHFALPEDELAVAQREGILHRNFQGYTTQGEADLIGFGVSAISMVGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVALDSDDLLRREVIKQLICNFKLDKTMIESEF 398

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             N       D+E  +       +E V    +R T RG  ++ ++ 
Sbjct: 399 SVNFNRYFKEDLELLQTFINDELVE-VDDKEIRVTLRGRLLIRNIC 443


>gi|37678377|ref|NP_932986.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
 gi|37197116|dbj|BAC92957.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           vulnificus YJ016]
          Length = 463

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I  ++  + + +T ++  EI+IE +P  + +    
Sbjct: 104 SLLQGRRVTQLHFGGGTPTFLSAKQITRLMTLLREEFTFTAEAEISIEVDPREIALEMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRAEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVERAKQLGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               +   L++ LS     LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 DRDSFAKTLEQVLSMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQNTIAT 282

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E   +  N     N+  Y      D +G G  A S +    
Sbjct: 283 LTDAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L  +      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVALDGDDLLRREVIKQLICNFKLDKVAIEKQF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +   + +LQ          +E V    +R T RG  ++ ++ 
Sbjct: 399 AVTFNQYFKEDLQLLQTFIDDALVE-VDEQVIRVTLRGRLLIRNIC 443


>gi|87302968|ref|ZP_01085772.1| Oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 5701]
 gi|87282464|gb|EAQ74423.1| Oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 5701]
          Length = 406

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 24/392 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQW-MRQLTGPRSISSI 74
               Y+H PFC ++C YCDF                I ++L  +Q  +     P  +S++
Sbjct: 4   PRAAYLHIPFCHRRCFYCDFAVVPLGDHADGAHSASIAAYLPLLQAEIAASPNPAPLSTV 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+ P+ +  +LDG+ + +  S   EIT+E +P+S +    +G    G+NR+S
Sbjct: 64  YIGGGTPSLLTPEQMGELLDGLRQRFGFSPGAEITLEMDPASFDRPRLEGMLALGINRVS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQTMTQWEM 189
           LG QS ++  L  LGR H     + A    R           S DLI  LP+Q +  W  
Sbjct: 124 LGGQSFDDAVLERLGRRHRRRHLLQAAAWLRQAQAAADLASWSLDLIQGLPEQDLPHWRQ 183

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ+AL     HLS+Y L +E GT+F ++ + G L LP  ++  DL +LT     + G  
Sbjct: 184 QLQQALELEPPHLSVYDLIVEPGTVFERLQQRGQLPLPDPDLGADLMDLTGEQLRSAGYG 243

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN++  G  S HN  YW    + G G GA S      +   ++  +  E++   ++
Sbjct: 244 RYEISNYALPGHASRHNRVYWSGAGWWGFGLGATS----APYGQRLARPRTREAYAAWLQ 299

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-----ERNLQR 364
               +    +        DE+LM+GLR REG++++     AG ++             + 
Sbjct: 300 TGAASTAAGQP-----PFDEWLMVGLRRREGVNLERLAKAAGLSMADRASLLGWMAPWRE 354

Query: 365 QGFIERVQFSRLRC-TQRGMTMLDSVIANLAV 395
           +G +  V+  R R    +G+ + ++V+  L  
Sbjct: 355 RGLL-LVEGRRWRLADPQGLALSNAVLRELLA 385


>gi|295095021|emb|CBK84111.1| coproporphyrinogen III oxidase, anaerobic [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 457

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 175/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  ADFQQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEILHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  N++ + + EI+IE +P  +E++    
Sbjct: 99  LFKGRHVSQLHWGGGTPTYLNKAQISRLMALLRGNFSFNDDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAYTLKRVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIASL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TETGYQFIGMDHFARPDDELAIAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + + + G+A+     L+ +      ++  L     +  ++ E    
Sbjct: 338 QN----QKELKLYYQQIDETGNALWRGIALTRDDCIRRDVIKALICNFRLEFREVESQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D++    L + G ++  + S +  T +G  ++ ++ 
Sbjct: 394 LQFSDYFAEDLKLLAPLAKDGLVDVSE-SAVVVTPKGRLLIRNIC 437


>gi|261363767|ref|ZP_05976650.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           ATCC 25996]
 gi|288568345|gb|EFC89905.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           ATCC 25996]
          Length = 473

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 157/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y++A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYINALNQRSMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    I  +   I K++ +  + E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFQLIPSGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGKLGFNRMSVGIQDFDPKVQEAVNRIQSYDETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTAESIKTTIDTVLSLDPDRLALYHYAHLPH-IFKPQRRIDTEAVPGSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+   ++   +      ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDINAYYAALDAGHLPIMRGYQLNQDDLLRRNIIQDLMCRFALDYQIYE 405

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            + G   D            L   G + R++   L  T +G  ++ ++
Sbjct: 406 SVFGIPFDRYFKDELADLEQLASLGLV-RLKPHGLTVTPKGRFLIRNI 452


>gi|320157734|ref|YP_004190113.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           vulnificus MO6-24/O]
 gi|319933046|gb|ADV87910.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           vulnificus MO6-24/O]
          Length = 463

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I  ++  + + +T ++  EI+IE +P  + +    
Sbjct: 104 SLLQGRRVTQLHFGGGTPTFLSAKQITRLMTLLREEFTFTAEAEISIEVDPREIALEMLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRAEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVERAKQLGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               +   L++ LS     LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 DRDSFAKTLEQVLSMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQNTIAT 282

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E   +  N     N+  Y      D +G G  A S +    
Sbjct: 283 LTDAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L  +      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVALDGDDLLRREVIKQLICNFKLDKVAIEKQF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +   + +LQ          +E V    +R T RG  ++ ++ 
Sbjct: 399 AVTFNQYFKEDLQLLQTFIDDALVE-VDEQAIRVTLRGRLLIRNIC 443


>gi|313667780|ref|YP_004048064.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica ST-640]
 gi|313005242|emb|CBN86675.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           lactamica 020-06]
          Length = 470

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 158/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A  +      +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 48  EYLEALHSRGADASNKPLSLYIHIPFCNTICYYCGCNKIITKDKGRADAYIEYLEKEMKL 107

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + + I K + +  + E +IE +P  V   
Sbjct: 108 LAPHLGGRHQLAQLHFGGGTPTFLSDNQLERVFEMIRKYFQLIPDGEYSIEIDPRKVSRE 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 168 TVLKLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 228 PYQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPGSEEKLDMLQYC 286

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +    E        L   N+  Y      D + IG  +  ++ 
Sbjct: 287 VQTLTERGYVFIGMDHFAKPDDELSVALEKGLLQRNFQGYSTYADCDLVAIGVSSIGKIG 346

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    V+    L+ +      ++  L  R  +  + +E
Sbjct: 347 NTYSQN----ERDIDAYYAAIDEGRLPVMRGYQLNQDDILRRNIIQDLMCRFALDYRVYE 402

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++G   D            L   G +   +   L  T +G  ++ ++
Sbjct: 403 NISGTPFDRYFKDELADLEKLADLGLVSLNKQG-LTVTPKGRFLIRNI 449


>gi|308388584|gb|ADO30904.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha710]
          Length = 493

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 84/407 (20%), Positives = 160/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           KY+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 71  KYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 130

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 131 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 190

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 191 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 250

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +   + +P     +D+    
Sbjct: 251 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTVAVPDSEEKLDMLQYC 309

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 310 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 369

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 370 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 425

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 426 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 472


>gi|145628838|ref|ZP_01784638.1| coproporphyrinogen III oxidase [Haemophilus influenzae 22.1-21]
 gi|144979308|gb|EDJ88994.1| coproporphyrinogen III oxidase [Haemophilus influenzae 22.1-21]
          Length = 333

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 114/329 (34%), Positives = 177/329 (53%), Gaps = 14/329 (4%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           MQ  +     R + SIF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE
Sbjct: 1   MQRFKDAIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVE 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
              F+GY  AG+ RIS+G+QS  +  L+ LGR HNA+EA +A++LA+       + DL++
Sbjct: 61  AERFKGYVSAGITRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMH 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+ +   +L++A+  +  H+S YQLTIE  T+F          LP ++   D++ 
Sbjct: 121 GLPNQTLEEALDDLRQAIELSPPHISWYQLTIEPNTMFAYRPP----KLPDDDALWDIFE 176

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AIS 296
               + +A G   YE S ++  G +  HNLNYWR+GDY+ IG GAH ++   +  +   S
Sbjct: 177 QGHQLLTAAGYQQYETSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFS 236

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             KHP+ +L+     G  + E++ +S   +  EF M   RL E +  +++E   G +   
Sbjct: 237 KTKHPKGYLR-----GEYLYEEKNVSEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSA 291

Query: 357 EC--ERNLQRQGFIERVQFSRLRCTQRGM 383
                    +Q +I     S  + T+ G 
Sbjct: 292 VKNQIDFAIQQNYIVENADS-WQITEHGK 319


>gi|253690584|ref|YP_003019774.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251757162|gb|ACT15238.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 457

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 165/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++  +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQQAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLEQEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FAGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+   F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR  + +   LS++       +LF    K  +  LPS    +D+   T    +
Sbjct: 220 ESFAFTLQRVAALSPHRLSVFNYAHLP-SLFAAQRKIKEADLPSAEQKLDILQQTIGSLT 278

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           E   + N+  Y      D +G+G  A S +     +
Sbjct: 279 QSGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGMGVSAISMIGDSYAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V+  G+ +     L+ +      ++  L     +S    E     
Sbjct: 339 N----QKELKQYYAQVKDKGNGLWRGLQLTRDDCLRRDVIKTLICNFQLSYAPIEAEYAV 394

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L   G ++  +   L  T +G  ++ ++ 
Sbjct: 395 DFKTYFEQDLALLAPLVADGLVDSQEDG-LVVTPKGRLLIRNIC 437


>gi|296313328|ref|ZP_06863269.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           polysaccharea ATCC 43768]
 gi|296840141|gb|EFH24079.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           polysaccharea ATCC 43768]
          Length = 473

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 158/407 (38%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGKHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRSIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|310778063|ref|YP_003966396.1| coproporphyrinogen III oxidase, anaerobic [Ilyobacter polytropus
           DSM 2926]
 gi|309747386|gb|ADO82048.1| coproporphyrinogen III oxidase, anaerobic [Ilyobacter polytropus
           DSM 2926]
          Length = 359

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 185/379 (48%), Gaps = 28/379 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+ KC YCDF S  +     +  +++    E++   +        +++FGGG
Sbjct: 4   AIYIHIPFCINKCQYCDFLSF-KSTPYKRREYVEYLKKEIKLYPEF----EYDTVYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++P  +  IL+ +     +  + E+T+E NP SV++   + +R AG+NR+S+GVQS
Sbjct: 59  TPSLLDPFEVKEILELLQ----IREDSEVTLEVNPKSVDLEKLRAFRNAGINRLSIGVQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ +GR H   EA      AR   F  +S DL+++LP Q++     +L +     
Sbjct: 115 FDPYYLKLIGRLHTGIEAEEIYRDARKAGFENVSLDLMFSLPGQSIEDVRKDLVKIAKLR 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L  E+GT  Y+    GDL      +  ++Y L      + G   YE+SN S 
Sbjct: 175 PEHISIYSLIWEEGTPLYEKLLKGDLEETDNEIEAEMYELIIDFLKSKGYIHYEVSNFSL 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E+ HN  YW   +Y+G G GA   +    ++ A++     E +   +  N     E 
Sbjct: 235 PGKEARHNTKYWENKEYLGAGLGASGYIGNQRYKNAVNF----EDYYGKIDNNEKPYEEV 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E L  +++ +   ++GLRL E           G   D E       L+++G++ + +  R
Sbjct: 291 EVLKEKEKEEYRYILGLRLLEK----------GVEADKEYIDKCVELEKKGYLMK-KSGR 339

Query: 376 LRCTQRGMTMLDSVIANLA 394
              T +G+ + + V     
Sbjct: 340 YILTHKGLMIANDVFEEFI 358


>gi|238755601|ref|ZP_04616938.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia ruckeri
           ATCC 29473]
 gi|238706201|gb|EEP98581.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia ruckeri
           ATCC 29473]
          Length = 457

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 169/406 (41%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++          L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  AAFKLAAGRYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIRQQAT 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I  +++ + +N+      E +IE +P  +E++    
Sbjct: 99  LFKGRQVSQMHWGGGTPTYLNKTQITQLMNLLRENFDFLPGAEQSIEVDPREIELDVIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R +    D LS++        LF    K  D  LPS    +D+   + S  
Sbjct: 219 PESFAFTLKRVVELNPDRLSVFNYAHLPA-LFAAQRKIKDEDLPSPEQRLDILQHSISFL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TDSGYQFIGMDHFARPDDELAVAQREGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  +++   V K G+A+     ++ +      ++  L     ++    E   
Sbjct: 337 AQN----EKDLKTYYACVEKQGNALWRGLVMTEDDCIRRDVIKTLICHFQLNYAAIEQQY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D+      +  G +ER +   +R T RG  ++ ++ 
Sbjct: 393 GILFADYFTEDLALLAPFEHDGLVERDEKG-IRVTPRGRLLIRNIC 437


>gi|194324372|ref|ZP_03058145.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. novicida FTE]
 gi|208780216|ref|ZP_03247558.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella novicida FTG]
 gi|194321437|gb|EDX18922.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella tularensis subsp. novicida FTE]
 gi|208743865|gb|EDZ90167.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Francisella novicida FTG]
          Length = 363

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 114/366 (31%), Positives = 183/366 (50%), Gaps = 17/366 (4%)

Query: 30  KKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           +KCPYCDFNSH  +      E + Q  + +          R + SIF GGGTPSL + + 
Sbjct: 2   RKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIGGGTPSLFKAEY 61

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  +L  I KN  +S N EIT+E NP +VE  +   Y+  G+NRISLGVQS ++  L+ L
Sbjct: 62  LDKVLQHITKNAKISINCEITLEMNPGTVERGSILSYQNIGINRISLGVQSFQDDKLKIL 121

Query: 149 GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR HN       I   +N      + D+++ LP Q+      ++ +A++    H+S YQL
Sbjct: 122 GRIHNYENIYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIFDITQAIAMQPTHISWYQL 181

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           TIE  TLF          LP E +   +    +   +  G   YE+S  +     S+HN 
Sbjct: 182 TIEPNTLFAAKPP----KLPDEEILESIEIAGKEALAHAGFKQYEVSAFAKNTLRSIHNS 237

Query: 268 NYWRYGDYIGIGPGAHSRVKV--GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ 325
           NYW +GDYIGIG GAHS++          +   KHP+ + +        + +   ++ ++
Sbjct: 238 NYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQT----DKFIKDSNIVTQDE 293

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRG 382
              EF++  LRL+ G  + ++E     + +I   + LQ    +G +E +  ++++ T +G
Sbjct: 294 IIYEFMLNTLRLKNGFKLSEFEQQTFLSSNI-ISQKLQLGIDKGLLE-LNANQIKPTAKG 351

Query: 383 MTMLDS 388
              L+ 
Sbjct: 352 YLFLND 357


>gi|115488116|ref|NP_001066545.1| Os12g0270100 [Oryza sativa Japonica Group]
 gi|108862462|gb|ABA97374.2| oxygen-independent coproporphyrinogen III oxidase family protein,
           expressed [Oryza sativa Japonica Group]
 gi|113649052|dbj|BAF29564.1| Os12g0270100 [Oryza sativa Japonica Group]
 gi|215696979|dbj|BAG90973.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 467

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 186/415 (44%), Gaps = 50/415 (12%)

Query: 23  VHWPFCVKKCPYCDFNSHV-------------RRYKVGQENFIQSFLTEMQWMRQL-TGP 68
           VH PFC K+C YCDF                         ++++  L E+   R +    
Sbjct: 49  VHLPFCRKRCHYCDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDG 108

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPSL+ P+ +A +LD +   + +S++ E++IE +P + +    +     
Sbjct: 109 VPLETVFFGGGTPSLVPPRLVAAVLDALRTRFGLSASPEVSIEMDPGTFDAAKLRELVGL 168

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQ 186
           GVNR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT   
Sbjct: 169 GVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEM 228

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           WE  L+  +     H+S+Y L IE+GT F +++  G   LP+E  + + Y +     S  
Sbjct: 229 WEESLRCTVDARPTHVSVYDLQIEQGTKFGQLYTPGVYPLPNEKDSANFYKIASKRLSEA 288

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G + YEIS++   G E  HN+ YW+   +   G G+ S +      +  S  +  + + +
Sbjct: 289 GYNHYEISSYCKTGYECKHNVTYWQNRSFYAFGLGSASYING----IRFSRPRRMKEYAE 344

Query: 307 MVRKNGHAVVEKEFLSS--EQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERN 361
            V+K  + V   E  +S  +  A + +M+ LR   G+ V+ +    GR+L        R 
Sbjct: 345 WVQKLENGVWSHESGNSGIKDMAMDVVMLSLRTAWGLDVQSFSKTFGRSLTESLCNTFRP 404

Query: 362 LQRQGFIERVQFSR------------------------LRCT-QRGMTMLDSVIA 391
               G +  +   R                        +R +   G  + + +I+
Sbjct: 405 FVESGLVIAMDMERRALQPSEFELDLQHDGENGSRVAFIRLSDPDGFLLSNELIS 459


>gi|152972675|ref|YP_001337821.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238892280|ref|YP_002917014.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae NTUH-K2044]
 gi|262041650|ref|ZP_06014843.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|330004714|ref|ZP_08305013.1| coproporphyrinogen dehydrogenase [Klebsiella sp. MS 92-3]
 gi|150957524|gb|ABR79554.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238544596|dbj|BAH60947.1| coproporphyrinogen III oxidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041003|gb|EEW42081.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|328536539|gb|EGF62875.1| coproporphyrinogen dehydrogenase [Klebsiella sp. MS 92-3]
          Length = 457

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 169/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  AEFDAAVARYPQRPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +  + +GGGTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++    
Sbjct: 99  LFATRQVKQLHWGGGTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +     ++ AR I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFDLLNHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+      D LS++       TLF    K  D  LPS    +++   T    
Sbjct: 219 PESFAFTLQKVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAEQKLEILQETIGSL 277

Query: 244 SAHGLHAYEISNHSFLGAE----SLH---NLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E      H   + N+  Y      D +G+G  A S +     
Sbjct: 278 TTAGYQFIGMDHFARPDDELAVAQRHGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + V + G+A+     L+ +      ++  L     + +   E    
Sbjct: 338 QN----QKELKQYYQQVAEQGNALWRGIALTRDDCLRRDVIKALICNFQLDIAAVEAQWD 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L   G +  V    ++ T +G  ++ ++ 
Sbjct: 394 VDFASYFAEDLKLLAPLAHDGLVA-VDDKVIQVTAKGRLLIRNIC 437


>gi|261380047|ref|ZP_05984620.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           subflava NJ9703]
 gi|284797256|gb|EFC52603.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           subflava NJ9703]
          Length = 473

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 84/407 (20%), Positives = 156/407 (38%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALNLRNMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + + I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFEMIRKYFQLIPNGEYSIEIDPRKVSRK 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q     +  +   LS   D L+LY        +F    +    V+P     +D+    
Sbjct: 231 PHQNTESIKTTIDTVLSLDPDRLALYHYAHLPH-IFKPQRRIDTNVVPGSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   +      ++    L  +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAALDAGHLPIMRGYQLDQDDILRRNIIQDLMCRFSLDYQIYE 405

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRC-----TQRGMTMLDSV 389
            + G          L+    +E +   RL+      T +G  ++ ++
Sbjct: 406 SVFGIPFSRYFAAELEDMKQLETLGLVRLKPHSLTVTPKGRFLIRNI 452


>gi|242241358|ref|YP_002989539.1| coproporphyrinogen III oxidase [Dickeya dadantii Ech703]
 gi|242133415|gb|ACS87717.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech703]
          Length = 457

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 86/405 (21%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +Y+H PFC + C +C  N  V R     + ++     E++    
Sbjct: 39  AAFLQAIARYPERPLSLYLHIPFCHRLCYFCGCNKLVTRQLHKADEYLDVLEQEIRQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + +GGGTP+ ++   I+ ++  + +++ +S + E+++E +P  +E++    
Sbjct: 99  LFAGRVVTQMHWGGGTPTFLDASQISRLMAVLREHFNLSPSAEMSLEIDPREIELDILDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + S   A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDESFIFALIARAKALGFASTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR        LS++        LF    K     LPS +  +++   T  + 
Sbjct: 219 PESFAFTLQRVAELQPHRLSVFNYAHLPN-LFAAQRKIRQEDLPSADQKLNILQQTIQML 277

Query: 244 SAHGLHAYEISNHSFLGAE----SLH---NLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E      H   + N+  Y      D +G+G  A S +     
Sbjct: 278 THAGYQFIGMDHFARPDDELAIAQRHGALHRNFQGYTTQGNTDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V+ +GHA+     L+ +      ++  L     +     E    
Sbjct: 338 QN----QKELKQYYAAVKAHGHALWRGLSLTLDDCIRRDVIKMLICHFRLDYAAIEAAYN 393

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  + +L         G +  V  + +R T +G  ++ ++ 
Sbjct: 394 IRFSAYFQEDLALLAPMAEDGLVV-VDTNAIRVTPKGRLLIRNIC 437


>gi|237714861|ref|ZP_04545342.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
 gi|229445186|gb|EEO50977.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
          Length = 337

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 105/340 (30%), Positives = 175/340 (51%), Gaps = 10/340 (2%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M   ++      I +I+FGGGTPS +E ++   I D I K++ ++   EIT+EANP  + 
Sbjct: 1   MAMRKEYLKGEDIETIYFGGGTPSQLEKEDFEQIFDTIRKHYGLNHCQEITLEANPDDLS 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                       NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY
Sbjct: 61  QEYLGMLSSLPFNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIY 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP +T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + 
Sbjct: 121 GLPGETKERWENDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFT 180

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
           L        G   YEISN    G  S HN +YW+   Y+G GP AHS   +       SI
Sbjct: 181 LLIEHLQKAGFEHYEISNFCRPGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI 240

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
               ++++K + ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   
Sbjct: 241 ----DTYIKGIEEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEY 295

Query: 358 CERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           C++      + G +E      LR T+ G+ + DS++++L 
Sbjct: 296 CQKMAAPYLKNGKLEEY-NGALRLTREGIFISDSIMSDLL 334


>gi|261344514|ref|ZP_05972158.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rustigianii DSM 4541]
 gi|282567424|gb|EFB72959.1| oxygen-independent coproporphyrinogen III oxidase [Providencia
           rustigianii DSM 4541]
          Length = 457

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 171/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +YVH PFC K C +C  N  V R K   + ++Q    E+     
Sbjct: 39  QAFIAATQRYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLQVIEKEIIQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ ++   ++ ++  + K++  + N E++IE +P  +E++    
Sbjct: 99  LLKNRTVTQMHWGGGTPTYLDKAQVSHLVGLLKKHFHFAPNAEMSIEVDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +     A I  A+   F   S DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQILVNREQDEEFIFALIKRAKETGFTSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++    A D LS++        LF    K  D  LP+    +D+   T +  
Sbjct: 219 PESFAFTLKKVAELAPDRLSVFNYAHLPN-LFAAQRKIKDEDLPTAEQKLDILQETIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           ++ G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TSDGYQFIGMDHFARPEDELAVAQREGILHRNFQGYTTQGDCDLLGLGVSAISMLGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 +K  +++   V + GHA+     L+ +      ++  L     ++    E L  
Sbjct: 335 -NYAQNQKDLKTYYAQVEEKGHALWRGLVLTDDDCLRRDVIKTLICNFQLNFAQIEALYP 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+E  + +   G +E  +   +  T +G  ++ +V 
Sbjct: 394 IDFKSYFKEDLELLKPMADDGLVEISETG-ITVTPQGRLLIRNVC 437


>gi|224535950|ref|ZP_03676489.1| hypothetical protein BACCELL_00814 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522438|gb|EEF91543.1| hypothetical protein BACCELL_00814 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 337

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 104/340 (30%), Positives = 176/340 (51%), Gaps = 10/340 (2%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M   ++     ++ +I+FGGGTPS +  ++   +   I + + +    EIT+EANP  + 
Sbjct: 1   MTERKEYLKGEAVETIYFGGGTPSQLSEEDFKEVFKTIEQVYGMREATEITLEANPDDLT 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                       NRIS+G+Q+ ++ +L+ L R HNA++AI A+   R   F  +S DLIY
Sbjct: 61  EEYIGMLHTLPFNRISMGIQTFDDATLQLLNRRHNATQAIEAVKRCRQAGFQNISIDLIY 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP +T  +W  +LQ+A+S  V+H+S Y L  E+GT  YKM +   +    E+ +++ ++
Sbjct: 121 GLPGETEQRWAQDLQQAVSLDVEHISAYHLIYEEGTPLYKMLQQHSVSQVDEDSSLNFFS 180

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
                 SA G   YEISN    G  S HN +YW+   Y+G GP AHS           S+
Sbjct: 181 TLIDTLSATGYEHYEISNFCKPGMYSRHNTSYWQGIPYLGCGPSAHSFDGDSREWNVASL 240

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            ++  S  +  R++     E E L ++ + +E+++ GLR   GIS ++ +   G  L   
Sbjct: 241 NQYLSSIEQGQRQH-----ETEQLDTQTRYNEYIITGLRTMWGISTEELKKKFGDRLWKY 295

Query: 358 CERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           C    +     G +E +   RL+ T+ G+ + D ++++L 
Sbjct: 296 CLEQAKPYLGNGKLE-LHNDRLKLTREGIFISDGIMSDLL 334


>gi|167855128|ref|ZP_02477900.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parasuis 29755]
 gi|167853763|gb|EDS25005.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parasuis 29755]
          Length = 455

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 168/405 (41%), Gaps = 27/405 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E+++   L
Sbjct: 38  DFKAAAARYPNKPLSLYVHIPFCHKLCYFCACNKIITRHQHKVDIYLDYLEKEIKYRADL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ I +GGGTP+ ++ +    ++  + K++ V  + EI+IE +P  +E+      
Sbjct: 98  FKDRTVTQIHWGGGTPTYLDEEQSLRLMAMLRKHFNVIDDAEISIEMDPREIELEMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R+ G NRIS+G+Q   ++  + + R  +     + +  AR   F   + DLIY LPKQT+
Sbjct: 158 REIGFNRISMGIQDFNKEVQKLVNREQDEEFIFSLMKRARELGFTSTNIDLIYGLPKQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L R +    D +S++       + F    K  D +LP+    +++   T     
Sbjct: 218 ESFMFTLDRVIELNPDRMSVFNYAHLP-SRFAAQIKIKDEMLPAPETKLEILQKTIETLG 276

Query: 245 AHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
             G     + + +    E         LH  N+  Y      D +G+G  A S +     
Sbjct: 277 NAGYKFIGMDHFAKPNDELASAQAKGELHR-NFQGYTTQEDADLLGLGVSAISLLGDSYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + +   V   G A+ +   ++ +      ++  L     +    +E    
Sbjct: 336 QNH----KELKQYYTEVEMRGIALHKGLSMTKDDCLRRDVIKALICNFKLEYDRFEQDYQ 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 392 IDFNQYFAEDLSLLAPLAKDGLLEIGEKG-IVVSPRGRLLIRNIC 435


>gi|325130905|gb|EGC53635.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis OX99.30304]
 gi|325136951|gb|EGC59548.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M0579]
          Length = 473

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 160/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +   + +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTVAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|15242697|ref|NP_201134.1| coproporphyrinogen oxidase-related [Arabidopsis thaliana]
 gi|10177310|dbj|BAB10571.1| oxygen-independent coproporphyrinogen-like protein [Arabidopsis
           thaliana]
 gi|115311487|gb|ABI93924.1| At5g63290 [Arabidopsis thaliana]
 gi|332010345|gb|AED97728.1| oxygen-independent coproporphyrinogen III oxidase [Arabidopsis
           thaliana]
          Length = 484

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 188/422 (44%), Gaps = 49/422 (11%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN--------SHVRRYKVGQE---------NFIQSFLTEMQ 60
               YVH PFC K+C YCDF         S  R   V +E         N++   + E++
Sbjct: 56  PTSAYVHLPFCRKRCHYCDFPILALGMSSSSARPSNVYEEGKEDDPRITNYVNLLVREIK 115

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
             R       ++ ++FFGGGTPSL+ P+ ++LIL+ ++ N+ +S + EI++E +P + + 
Sbjct: 116 ATRTDFDTNPNLETVFFGGGTPSLVPPKLVSLILETLSLNFGLSPDAEISMEMDPGTFDG 175

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
              +   K GVNR+SLGVQ+ +++ L+  GR H  S+   AI   +       S DLI +
Sbjct: 176 QKLKDLMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKECGVENWSMDLISS 235

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  WE  L+ A+    +H+S+Y L +E+GT F  ++  G   LPSE  + + Y  
Sbjct: 236 LPHQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTPGQSPLPSETQSAEFYKT 295

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
             S+    G   YE+S++S  G +  HNL YW+   +   G G+ S V  G         
Sbjct: 296 ASSMLRGAGYEHYEVSSYSRDGFKCKHNLIYWKNKPFYAFGLGSASYVG-GLRFSRPRRL 354

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-- 356
           K   +++  +            +  +  A + LM+  R  +G+ +K++    G  +    
Sbjct: 355 KEYTNYVADLENGAANWCGNGDVDLKDVATDILMLSFRTSKGLELKEFGEAFGSEVVKSI 414

Query: 357 -ECERNLQRQGFIERVQF-------------------------SRLRC-TQRGMTMLDSV 389
            +        G I  +                             LR     G  + + +
Sbjct: 415 CKVYEPYVESGHIVCLDDMRSEVMIDEFKTLVANDEVKIEDHVRYLRLKDPDGFLLSNEL 474

Query: 390 IA 391
           I+
Sbjct: 475 IS 476


>gi|121635483|ref|YP_975728.1| coproporphyrinogen III oxidase [Neisseria meningitidis FAM18]
 gi|120867189|emb|CAM10957.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis FAM18]
 gi|254670359|emb|CBA05814.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha153]
 gi|254671795|emb|CBA03870.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha275]
 gi|319411083|emb|CBY91486.1| oxygen-independent coproporphyrinogen III oxidase
           (coproporphyrinogenase; coprogen oxidase) [Neisseria
           meningitidis WUE 2594]
 gi|325132929|gb|EGC55606.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M6190]
 gi|325138916|gb|EGC61466.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis ES14902]
 gi|325198935|gb|ADY94391.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis G2136]
          Length = 473

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTASVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|162452119|ref|YP_001614486.1| coproporphyrinogen oxidase [Sorangium cellulosum 'So ce 56']
 gi|50403842|gb|AAT76674.1| HemN [Sorangium cellulosum]
 gi|161162701|emb|CAN94006.1| Coproporphyrinogen oxidase [Sorangium cellulosum 'So ce 56']
          Length = 415

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 134/412 (32%), Positives = 203/412 (49%), Gaps = 35/412 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             + VYVH+P+C+KKCPYCDF S    R  +    +  + L E++   ++ G R + SIF
Sbjct: 5   EPITVYVHFPWCLKKCPYCDFVSFAKAREAIDHRGYADAVLAELRKREEVLGERELRSIF 64

Query: 76  FGGGTPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTPSL EP  +  +L    A     S ++E+T+E NP+S++    + +R  GVNR+S
Sbjct: 65  FGGGTPSLWEPDEMGRVLSAVTAAAGRRSPDLEVTVECNPTSLDEQRARAFRAIGVNRLS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ L+ + LRFLGR H+    + A+  A R+  PR+S DLIY +   T+     +   
Sbjct: 125 VGVQGLDVERLRFLGRLHDPDGGLGALSAALRSGMPRVSGDLIYGVAVGTVEAAREQRPE 184

Query: 194 --------ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                     S  V H+S Y LT+E GT F ++ + G L L  ++   D +        A
Sbjct: 185 QAAAEARAVASTGVTHISAYSLTVEPGTSFGELARRGRLPLAGDDGVADTFFAIDEALEA 244

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV------------ 293
            GL  YE+SN++  G E+ HNL YW+  DYIG+G  A+  V     R             
Sbjct: 245 EGLAHYEVSNYARPGDEARHNLGYWQGIDYIGLGCAAYGTVSRPDPRWGLRSAGAEGHDG 304

Query: 294 -----AISIEKHPESWLKMVRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       PE ++  + + G A+    +E L+ E +  E +M+GLRLREG+ ++  
Sbjct: 305 EASAVRYRNIVSPERYMAAMAEGGEAIAVESEERLAPETRLSERIMLGLRLREGLDLEAA 364

Query: 347 EMLAGRNLDIE----CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               G              L+R G +E V   R+R  +      D + A+L 
Sbjct: 365 AAALGVPAWPPSRRRAAERLERAGRLE-VAGGRVRVPRAAWVFADGIAADLF 415


>gi|328876620|gb|EGG24983.1| hypothetical protein DFA_03229 [Dictyostelium fasciculatum]
          Length = 545

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 141/417 (33%), Positives = 215/417 (51%), Gaps = 47/417 (11%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
             +   Q  + + +Y+HWP+C K C YC FN ++    V      QS +TE+  + +L  
Sbjct: 147 NEDAISQREHPISIYIHWPYCSKICGYCSFNKYLDGPHVDHSRMKQSMVTELSNLIKLYY 206

Query: 68  P-----------RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
           P             + SI+FGGGTPSL     ++ I++ + + +  ++     +E N   
Sbjct: 207 PSSPSSSSSSIQYKLKSIYFGGGTPSLATIDTLSSIVETVYQYFPTTTTNRKDLEINLE- 265

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                           +SLGVQ+L ++ L+FLGR HN  +AI +I    +IF  +SFD+I
Sbjct: 266 ----------------LSLGVQALNDEDLKFLGRTHNTKQAIESIETCNSIFDHVSFDMI 309

Query: 177 YALPKQ-TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVA 232
           YA   Q ++ QW  EL++A+  +  HLSLY LT E GT F+K    H+   ++ P+ +  
Sbjct: 310 YARRGQHSVEQWRQELKQAVQLSKGHLSLYNLTFEDGTAFFKRLRKHRSNHIIKPTNDQC 369

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
              Y      T   G++ YEISN S  G  S HNLNYWR GDYIGIGPGA SRV + +++
Sbjct: 370 SLHYMAAIEETEKVGMNQYEISNFSIPGHHSQHNLNYWRGGDYIGIGPGACSRVSIFNNQ 429

Query: 293 ------VAISIEKHPESWLKMVRKNGHAVVEKEFLSSE--QQADEFLMMGLRLREGISVK 344
                 VA+    HP++W+  V  NGH + E E  + E   + +E L+MGLR +EG+S  
Sbjct: 430 QDKPEKVALKTIIHPKTWMDRVDANGHGLFEDETTTLEFKDRINELLLMGLRTKEGVSRS 489

Query: 345 DWEMLA-GRN----LDIECERNLQRQGFIERVQFSRLRC-TQRGMTMLDSVIANLAV 395
            +  L+ G +    LD      LQ  G I   +   LR  T     +LD+++ ++ +
Sbjct: 490 TFRYLSHGLDIEQVLDPIVLSRLQSIGMIVLDENG-LRVTTNEAFMILDTLLLDICL 545


>gi|304386631|ref|ZP_07368915.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis ATCC 13091]
 gi|304339281|gb|EFM05357.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis ATCC 13091]
 gi|325141025|gb|EGC63531.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis CU385]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 71  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 130

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 131 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 190

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 191 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 250

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 251 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 309

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 310 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 369

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 370 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 425

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 426 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 472


>gi|167630495|ref|YP_001680994.1| oxygen-independent coproporphyrinogen iii oxidase, hemn
           [Heliobacterium modesticaldum Ice1]
 gi|167593235|gb|ABZ84983.1| oxygen-independent coproporphyrinogen iii oxidase, hemn
           [Heliobacterium modesticaldum Ice1]
          Length = 408

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 125/390 (32%), Positives = 187/390 (47%), Gaps = 23/390 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
           GVY+H PFC  KC YCDF SH    +     +  + + +M+        R     +++FF
Sbjct: 22  GVYIHVPFCRSKCAYCDFYSHPAGSEFRMA-YANAVIGQMEREADQWRHRLPSGPATVFF 80

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSS-------NVEITIEANPSSVEVNNFQGYRKAG 129
           GGGTP+L+       IL+ + + +            +EITIEANP +V+      + +AG
Sbjct: 81  GGGTPTLLPADAGVRILETLRRCYGWDDLGKRSGIPMEITIEANPGTVDERELAIWAEAG 140

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ+ + + L FLGR    ++   A+  AR      +S DLIY +P QT+  W 
Sbjct: 141 CNRLSLGVQAFQPRLLTFLGRCQRLNDVTEALAAARKAGIDNISLDLIYGIPGQTLEDWR 200

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           + L+ ALS +  HLSLY L  E+GT   +    G      E++ V++Y   Q    + G 
Sbjct: 201 LSLKLALSLSPAHLSLYNLKTEQGTRLAEWMMRGLAEPCVEDLEVEMYEEAQQTLQSAGF 260

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN +  G E  HNLNYWR GDY+G G GA S     +     S      +++   
Sbjct: 261 LQYELSNFAQPGWECRHNLNYWRRGDYLGFGSGAVS----TAGLRRWSWPADSSAFVLSF 316

Query: 309 RKNGHA-VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-----RNLDIECERNL 362
            K      VE+E LS E  A E +++GLR R G+++       G               L
Sbjct: 317 EKGEEIQPVEEECLSPELAAREAIILGLRTRAGVNLSSVVDEYGLGSATLEKWHRLSAEL 376

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
            RQG+I     + +    R   + + ++A 
Sbjct: 377 FRQGWIHY-DGTNISLASRSYLIANEIMAR 405


>gi|261391896|emb|CAX49356.1| oxygen-independent coproporphyrinogen III oxidase
           (coproporphyrinogenase; coprogen oxidase) [Neisseria
           meningitidis 8013]
          Length = 473

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSITLKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|319639248|ref|ZP_07993999.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
 gi|317399432|gb|EFV80102.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria mucosa
           C102]
          Length = 473

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 157/407 (38%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +IQ    EM+ 
Sbjct: 51  EYIQALNLRNMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIQYLEKEMEL 110

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + D I K + +  N E +IE +P  V   
Sbjct: 111 LAPHLGGRHQLAQLHFGGGTPTFLSDDQLERVFDMIRKYFQLIPNGEYSIEIDPRKVSRE 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 K G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLKLGKLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q     +  +   LS   D L+LY        +F    +    V+P     +D+    
Sbjct: 231 PHQNTESIKTTIDTVLSLNPDRLALYHYAHLPH-IFKPQRRIDTNVVPGSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   +      ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAALDAGHLPIMRGYQLNQDDILRRNIIQDLMCRFSLDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRC-----TQRGMTMLDSV 389
            + G          L+    +E +   RL+      T +G  ++ ++
Sbjct: 406 SVFGIPFSRYFAVELEDMKQLETLGLVRLKPHGLTVTPKGRFLIRNI 452


>gi|322514702|ref|ZP_08067729.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
 gi|322119351|gb|EFX91464.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
          Length = 455

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 165/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 38  DFKAAAERYPNRPLSLYVHIPFCHKLCYFCACNKIITRHQHKVDIYLDYLEKEIKTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ I +GGGTP+ ++      ++  + K + VS + EI+IE +P  +E++     
Sbjct: 98  FTNRTVTQIHWGGGTPTYLDEAQSERLMAMLRKYFNVSDDAEISIEMDPREIELDMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R+ G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ +
Sbjct: 158 RRIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +    +R +    D +S++       + F    K    +LP     + +   T     
Sbjct: 218 ESFMYTFERVIELNPDRMSVFNYAHLP-SRFAAQIKIKGDMLPPPETKLAILQKTIEFLG 276

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +           + + + N+  Y      D +G+G  A S +     +
Sbjct: 277 DNGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  + +   V + G A+ +   LS +      ++  L     +     +     
Sbjct: 337 NH----KELQQYYANVEEGGIALHKGLALSKDDCVRRDVIKALICNFKLEFDRLQAEYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L + G +E  + S +  + RG  ++ ++ 
Sbjct: 393 DFKQYFAEDLALLEPLAKDGLLEITENS-IVVSPRGRLLIRNIC 435


>gi|15676293|ref|NP_273428.1| coproporphyrinogen III oxidase [Neisseria meningitidis MC58]
 gi|161870690|ref|YP_001599863.1| coproporphyrinogen III oxidase [Neisseria meningitidis 053442]
 gi|254805586|ref|YP_003083807.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha14]
 gi|7225600|gb|AAF40819.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis MC58]
 gi|161596243|gb|ABX73903.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis 053442]
 gi|254669128|emb|CBA07761.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis alpha14]
 gi|316984882|gb|EFV63838.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis H44/76]
 gi|325128872|gb|EGC51728.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis N1568]
 gi|325134961|gb|EGC57593.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M13399]
 gi|325145173|gb|EGC67455.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M01-240013]
 gi|325199572|gb|ADY95027.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis H44/76]
 gi|325202804|gb|ADY98258.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M01-240149]
 gi|325203487|gb|ADY98940.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M01-240355]
 gi|325208797|gb|ADZ04249.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis NZ-05/33]
          Length = 473

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|253733165|ref|ZP_04867330.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253728705|gb|EES97434.1| coproporphyrinogen dehydrogenase [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 313

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 12/315 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 5   SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLRTMYVGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 60  TPTALSIDQLERLLRAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 118 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 177

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 178 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 237

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW   +Y G G GA   V    +     +      ++K + K   A++  
Sbjct: 238 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKESKAILVS 293

Query: 319 EFLSSEQQADEFLMM 333
              S  ++ +E +  
Sbjct: 294 NKPSLTERMEEEMFS 308


>gi|271502635|ref|YP_003335661.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
 gi|270346190|gb|ACZ78955.1| oxygen-independent coproporphyrinogen III oxidase [Dickeya dadantii
           Ech586]
          Length = 457

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 87/405 (21%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +Y+H PFC + C +C  N  V R     + ++     E+     
Sbjct: 39  AAFTEAVVRYPHRPLSLYLHIPFCYRLCYFCGCNKLVTRQLHKADEYLDRLALEIHQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ +    I+ ++  + +++  S + E+++E +P  +E++    
Sbjct: 99  LFANRTVTQMHWGGGTPTFLNKAQISRLMSLLRQHFHFSEHAEMSLEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +   A I  A+   F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFALIERAKALGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR      D LS++       +LF    K  +  LP     + +   T    
Sbjct: 219 PDSFAFTLQRVAELRPDRLSVFNYAHLP-SLFAAQRKIKEADLPDAEQKLAILQQTIQSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +A G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDTDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V + GHA+     L+ +      ++  L     +     E   G
Sbjct: 338 QN----QKELKLYYADVEQRGHALWRGLSLTRDDCIRRDVIKALICHFQLEFAAIEQAYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     + + G +E +Q   +R T +G  ++ ++ 
Sbjct: 394 LSFGDYFREDLALLAPMAQDGLVE-IQADGIRVTAKGRLLIRNIC 437


>gi|2104798|emb|CAA70593.1| coproporphyrinogen III oxidase [Geobacillus stearothermophilus]
          Length = 321

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/323 (33%), Positives = 167/323 (51%), Gaps = 10/323 (3%)

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+++E + +   L+ I K++  S   VE T EANP+ +     Q  + AGVNR+S 
Sbjct: 1   GGGTPTVLEMKQLDFFLESIYKHFRFSKGEVEFTFEANPNELSKEKLQLLKDAGVNRLSF 60

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  +  L+ +GR H   + +  I LA+   F  +S DL+Y LP QT+ Q++ +L  A
Sbjct: 61  GVQTFHDSLLKAIGRTHCYDDVMRTISLAKEVGFDNISIDLMYGLPNQTLQQFQADLDIA 120

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            S  + H+S Y L IE  T+FY + + G L LPSE    ++Y         HG   YEIS
Sbjct: 121 FSPDIQHISAYSLIIEPKTIFYNLWRKGPLPLPSEEEEAEMYEGAMRQMELHGYQPYEIS 180

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++  G +S HNL YW   +Y GIG GAHS V+         I    + ++  VR+ G  
Sbjct: 181 NYARPGFQSRHNLTYWNNEEYYGIGAGAHSYVERVRRVNIGPI----KQYIAKVRETGLP 236

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
             E   ++  +Q +E + +GLR  EG+S + +    GR++        R    +G  E  
Sbjct: 237 YREIHQVTWMEQMEEEMFLGLRKTEGVSKQCFFEKFGRDVHDVFGAAIRAEHEKGLPEET 296

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
             + +R T+RG  + + V     
Sbjct: 297 A-THVRLTRRGRLLGNEVFQAFL 318


>gi|84386312|ref|ZP_00989340.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
 gi|84378736|gb|EAP95591.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
          Length = 463

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 164/408 (40%), Gaps = 29/408 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  VADYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVIEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I  ++  + + +  +++ EI+IE +P  +E++   
Sbjct: 104 SLLNGREVTQLHFGGGTPTFLTKTQITRLMMILREEFNFTADAEISIEVDPREIELDVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    IA +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRNEGFNRLSIGVQDFNKEVQKLVNREQDEEFIIAMVKRAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T   
Sbjct: 224 TQALFAETLKQVLEMKPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPEPKEKMAILQDTIET 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D IG G  A S V    
Sbjct: 283 LTGAGYQFIGMDHFALPEDELAVAQREGILHRNFQGYTTQGEADLIGFGVSAISMVGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVALDSDDLLRREVIKQLICNFKLDKTMIESEF 398

Query: 351 GRNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
             N +   + +L   G ++         V    +R T RG  ++ ++ 
Sbjct: 399 SVNFNRYFKEDL---GLLQTFINDELVEVDDKEIRVTLRGRLLIRNIC 443


>gi|325205453|gb|ADZ00906.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis M04-240196]
          Length = 473

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|303233694|ref|ZP_07320348.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna BVS033A4]
 gi|302495128|gb|EFL54880.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna BVS033A4]
          Length = 367

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF S + +     + + +    E+   +       I +I+ GGG
Sbjct: 3   GIYIHIPFCDYKCNYCDF-STMTKQYNRVDEYFRLLQKEITIYKN--PNEKIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++ + I  I + + K++ +    E TIE NP  V     + Y+  GV+RISLGVQS
Sbjct: 60  TPNLVDSKYIKEIYNLLNKSFDL-QIKEFTIECNPEFVTKEKIESYKSIGVDRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++  RFLGR H  ++ + +  + +     +S DLI+  P Q++   + +L      A 
Sbjct: 119 FNDEYNRFLGREHKVTDVLKSFEIIKQYIDNISIDLIFGFPNQSLESLDNDLNYITKLAP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK ++D +    + ++  ++Y            + YEISN +  
Sbjct: 179 NHVSWYNMILEPGTKFYKDYEDINR---NNDIEYEMYVKICKGLE--DYNHYEISNFAKD 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G  +   +    +           ++ + +      +   E
Sbjct: 234 DFESKHNKIYWKDENYYGFGLSSSGYINQKRYTNEF----FYPNYKRKIINEQKPINFSE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRL 376
            +  E++  EF++  +RL+EG+ +K++    G +L   +        ++  +  ++ + L
Sbjct: 290 NIDLEKREFEFIITNMRLKEGLDLKEYNQKFGIDLYKNNKNMIDKWIKERLLT-LESNHL 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + ++   ++ V
Sbjct: 349 SFTDQGFFISNTFFIDILV 367


>gi|297797323|ref|XP_002866546.1| hypothetical protein ARALYDRAFT_496512 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312381|gb|EFH42805.1| hypothetical protein ARALYDRAFT_496512 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 484

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/423 (25%), Positives = 184/423 (43%), Gaps = 50/423 (11%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHV------------------RRYKVGQENFIQSFLTEM 59
               YVH PFC K+C YCDF                      +       N++   + E+
Sbjct: 55  PTSAYVHLPFCRKRCHYCDFPILALGTSSSSLTSPSNVYEEGKEDDPRITNYVNLLVREI 114

Query: 60  QWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           Q  R       ++ ++FFGGGTPSL+ P+ ++LIL+ ++ N+ +S + EI++E +P + +
Sbjct: 115 QATRTDYDTNPNLETVFFGGGTPSLVPPKLVSLILETLSLNFGLSPDAEISMEMDPGTFD 174

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +   K GVNR+SLGVQ+ +++ L+  GR H  S+   AI   +       S DLI 
Sbjct: 175 GQKLKELMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKECGVENWSMDLIS 234

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           +LP QT+  WE  L+ A+    +H+S+Y L +E+GT F  ++  G   LPSE  + + Y 
Sbjct: 235 SLPHQTLEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTPGQSPLPSETQSAEFYK 294

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
              S+    G   YE+S++S  G +  HNL YW+   +   G G+ S V  G        
Sbjct: 295 TASSMLRGAGYEHYEVSSYSKDGFKCKHNLKYWKNKPFYAFGLGSASYVG-GLRFSRPRR 353

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI- 356
            K   +++  +            +  +  A + LM+  R  +G+ +K++    G  +   
Sbjct: 354 LKEYTNYVADLENGAANWCGNGDVDLKDVATDILMLSFRTSKGLELKEFGEAFGSEVVKS 413

Query: 357 --ECERNLQRQGFIERVQF-------------------------SRLRC-TQRGMTMLDS 388
             +        G I  +                             LR     G  + + 
Sbjct: 414 ICKVYEPYVESGHIVCLDDMRSEVMSDEFQTLVANDEVEIEDHVRYLRLKDPDGFLLSNE 473

Query: 389 VIA 391
           +I+
Sbjct: 474 LIS 476


>gi|94268847|ref|ZP_01291301.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
 gi|93451447|gb|EAT02289.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
          Length = 404

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/400 (27%), Positives = 180/400 (45%), Gaps = 16/400 (4%)

Query: 5   SAYENNMTGQ-GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +A    +  Q  + + G+Y+H PFC +KC YC F S   R      +++Q+   + + + 
Sbjct: 11  AAVNAPLAPQEAATAPGIYLHIPFCHRKCDYCAFVSLPCRRPPV--SYLQALRRQARQLA 68

Query: 64  QLTGPRS--ISSIFFGGGTPSLIEPQNIALILDG----IAKNWTVSSNVEITIEANPSSV 117
           +L   R     +IF GGGTP+      +A +L                 EIT+E NP ++
Sbjct: 69  ELPWSRRQTFGTIFIGGGTPTSYPAAQLAALLAELRSLFCCRGAAGDEPEITVECNPGTI 128

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
            +   +  R AGVNR+S+G+QS  +  L  +GR H+ + A+AA+ L R   F   + DL+
Sbjct: 129 TLEGLRQLRAAGVNRLSIGIQSFADHLLTAVGRGHDRAAALAALKLVRQAGFEDYNLDLM 188

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q++  ++ +L  AL     HL+LYQLT E GT      + G   LPS+     + 
Sbjct: 189 YGLPGQSIADFKADLLTALEAEPTHLALYQLTPEAGTPLAARLEAGQQTLPSDEACATME 248

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
              + + +      YE++N+S  G +  HNLNYW  G Y+G+G  A S +          
Sbjct: 249 AQARELLTEMVYEQYEVANYSLPGYQCRHNLNYWHNGSYLGLGAAAFSSLAGLRLGNVNG 308

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
               P  + + +          E L  E    E ++MGLRL  G+ + + +         
Sbjct: 309 ----PGHYRRRLAAGQAPYATAEALGREAAFRETVIMGLRLSRGVEIAELQRRFALTPAD 364

Query: 357 ECERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                L       +      RL  ++R   + + V++ L 
Sbjct: 365 YYGTMLDNLLAAGLLVAANGRLALSRRAFPLANQVLSQLV 404


>gi|300725173|ref|YP_003714501.1| coproporphyrinogen III oxidase [Xenorhabdus nematophila ATCC 19061]
 gi|297631718|emb|CBJ92437.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Xenorhabdus nematophila ATCC 19061]
          Length = 457

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/404 (22%), Positives = 175/404 (43%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++          L +Y+H PFC K C +C  N  V R K   + ++     E+    +L
Sbjct: 40  AFKRAAARYHDRPLSLYIHIPFCHKLCYFCGCNKLVTRQKHKADEYLNVLEKEIITRAKL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R +S + +GGGTP+ ++   I+ ++  +  ++    + E+++E +P  +E++     
Sbjct: 100 FSQRKVSQMHWGGGTPTYLDKAQISRLMSMLRSHFHFLPDAELSLEIDPREIELDVIDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   ++  R + R  +     A ++ AR   F   S DLIY LPKQT 
Sbjct: 160 RHEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALVNRARETGFTSTSIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR L+ + D LS++        +F    K  +  LP+    +D+   T S  +
Sbjct: 220 ESFAFTLQRVLALSPDRLSVFNYAHLPD-VFAAQRKIKEQDLPNATQKLDILQATISTLT 278

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +    E        + + N+  Y      D +G+G  A S +      
Sbjct: 279 GNGYQFIGMDHFARPDDELAVAQRAGVLHRNFQGYTTQGECDLLGMGVSAISMLGDS--- 335

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
             +  +K  +++   V   GHA+     L+ +      ++  L     ++  D E     
Sbjct: 336 -CVQNQKDLKTYYAEVELQGHALWRGLVLTQDDCIRRDVIKELMCNFRLNFADIEQRHAL 394

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           N       D++    L   G +E  + S+++ + +G  ++ ++ 
Sbjct: 395 NFADYFAKDLQLLAPLAEDGLVEVTE-SQVQVSPKGRLLIRNIC 437


>gi|261250083|ref|ZP_05942660.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           orientalis CIP 102891]
 gi|260939587|gb|EEX95572.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           orientalis CIP 102891]
          Length = 462

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 86/408 (21%), Positives = 161/408 (39%), Gaps = 29/408 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 ALLQGRKVTQLHFGGGTPTFLTKAQISRVMAILRGEFYFEGDAEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    +A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVARAKELGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 223 TKDSFAETLKQVLEMKPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPIAEEKMAILQDTIAT 281

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGS 290
            +        + + +    E   +  N     N+  Y      D +G G  A S +    
Sbjct: 282 LTGADYQFIGMDHFAQPDDELAVAQRNGVLHRNFQGYTTQGEADLVGFGVSAISMIGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L S+      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVTDQRHALWKGVALDSDDLLRREVIKQLICNFKLDKTMIESEF 397

Query: 351 GRNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
               +   + +L   G ++         V    +R T RG  ++ ++ 
Sbjct: 398 KVQFNHYFKEDL---GLLQTFINDELVEVDDEEIRVTLRGRLLIRNIC 442


>gi|226951902|ref|ZP_03822366.1| coproporphyrinogen III oxidase [Acinetobacter sp. ATCC 27244]
 gi|226837442|gb|EEH69825.1| coproporphyrinogen III oxidase [Acinetobacter sp. ATCC 27244]
          Length = 344

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 186/350 (53%), Gaps = 12/350 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           ++ ++ + + + +   ++   RSI S+F GGGTPSLI  Q    + + +       ++ E
Sbjct: 4   EQQYLAALVADFETQIEMAQGRSIHSVFIGGGTPSLISAQGYQWLFEQLKARLGFEADCE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           IT+EANP +VE + F  Y   G+NR+SLGVQS + + L+ LGR H AS A+ AIH AR  
Sbjct: 64  ITLEANPGTVEHDPFADYLAVGINRLSLGVQSFDTEHLQRLGRIHTASNALDAIHQARQA 123

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F R++ DL++ LP+QT  Q   +LQ A+ +   H+S YQLTIE  T+F++       VL
Sbjct: 124 GFERVNVDLMHGLPQQTEQQALADLQLAVEHGATHISWYQLTIEPNTVFFR----TQPVL 179

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P + V   +    ++   A+G   YE+S        S HNLNYW++GDY+ IG GAH +V
Sbjct: 180 PQDEVLEHIQAEGEAYLKANGYVNYEVSAWRKE-KPSAHNLNYWQFGDYLAIGAGAHGKV 238

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       + P+ +L  V       V+ + + +++ A EF+M  LRL +G+    +
Sbjct: 239 THPEGVYRFQKTRLPKDYLAKVPAEH---VQMKRIEADELAFEFMMNALRLNDGVEATLY 295

Query: 347 EMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           E   G +L         L+ +  +      R+ CT++G   L++V+    
Sbjct: 296 EQRTGLSLAELTPILNTLREKKLLV-AAADRIACTEQGHIFLNTVLEAFL 344


>gi|148976532|ref|ZP_01813228.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
 gi|145964108|gb|EDK29365.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
          Length = 463

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  VSDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHSHKADEYLDVIEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I  ++  +   +  +++ EI+IE +P  +E++   
Sbjct: 104 SLLNGREVTQLHFGGGTPTFLSKTQITRLMMILRDEFNFTADAEISIEVDPREIELDVLD 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +    +A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRNEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVQRAKELGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T   
Sbjct: 224 TQALFAETLKQVLEMKPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQDTIET 282

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S V    
Sbjct: 283 LTGAGYQFIGMDHFALPEDELAVAQREGVLHRNFQGYTTQGECDLVGFGVSAISMVGDSY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L ++      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVALDNDDLLRREVIKQLICNFKLDKTMIESEF 398

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             +       D+E  +       +E V    +R T RG  ++ ++ 
Sbjct: 399 AVDFNRYFKEDLELLQTFINDDLVE-VDDKEIRVTLRGRLLIRNIC 443


>gi|160915155|ref|ZP_02077368.1| hypothetical protein EUBDOL_01163 [Eubacterium dolichum DSM 3991]
 gi|158432954|gb|EDP11243.1| hypothetical protein EUBDOL_01163 [Eubacterium dolichum DSM 3991]
          Length = 363

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 187/377 (49%), Gaps = 22/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           VYVH PFC   C YCDF      ++   + ++Q+   E+   ++      I++++ GGGT
Sbjct: 4   VYVHVPFCKTICSYCDF-VRCGYHQGLADKWLQAIQKEI---KEKLRNEKITTLYLGGGT 59

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    + ++L+ + +    +   E T+EAN  S++ +  +     GVNRISLGVQS+
Sbjct: 60  PTSLTIAQMEVLLECLGEYS--ADVEEYTVEANVESLDDSMLELLAGYGVNRISLGVQSI 117

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +   ++ + R+H+    I  I    +     +S DLIY LP QT   W+ +L+      +
Sbjct: 118 DATLIKRMNRHHDKQMVIDTIQRIHHHGIHNISCDLIYGLPAQTPALWQEDLRVLCEQDI 177

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY LTIE+ + F +      +    E+   D Y    +   + G   YEISN +  
Sbjct: 178 QHISLYALTIEEHSAFGR----EKVAAMEEDEEADFYEAAITYLQSQGFEQYEISNFARH 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HN  YW Y D+IGIG GA  + K   +       ++ E++L+             
Sbjct: 234 KHYSKHNQAYWHYEDFIGIGCGASGKQKHARYDNT----RNLETYLRQ-----GPSPSYI 284

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFSRLR 377
            L+S+ +  E +MMGLRL +GIS+  +    G  L    E  +Q+  +  + R++   ++
Sbjct: 285 ALTSKDERFEMIMMGLRLTQGISLSKFSKRFGCELLSCYENAVQKNIKLDLLRMENGFIK 344

Query: 378 CTQRGMTMLDSVIANLA 394
            T +G+ +L+SV+ +  
Sbjct: 345 ATDKGLHVLNSVLLDFM 361


>gi|78212387|ref|YP_381166.1| coproporphyrinogen III oxidase, anaerobic [Synechococcus sp.
           CC9605]
 gi|78196846|gb|ABB34611.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CC9605]
          Length = 394

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/392 (29%), Positives = 191/392 (48%), Gaps = 29/392 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEM-QWMRQLTGPRSI 71
               Y+H PFC ++C YCDF       +   +N      I+ +L+ + + +        +
Sbjct: 7   PRSAYLHIPFCHRRCYYCDFAVVPLGDQARADNGPGSRSIREYLSLLHREIASAPSGPPL 66

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+++ GGGTPSL+ P  I  +LD +   + +    EIT+E +P++ +          GVN
Sbjct: 67  STVYVGGGTPSLLCPDQIGDLLDALTNKFGLQPGAEITLEMDPATFDAAQLASVLAHGVN 126

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQTMTQ 186
           RISLG QS ++  L  LGR H  S+  AAI      +        S DLI  LP QT+T 
Sbjct: 127 RISLGGQSFDDAVLEQLGRRHRLSDLHAAIDWLVQAWRDGALISWSLDLIQNLPGQTLTG 186

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L +A++    HLS+Y L++E GT+F +    G L LP +++A  L   T    +A 
Sbjct: 187 WDAQLDQAIASQAPHLSIYDLSVEPGTVFDRQRSLGLLKLPEDDLAFALMERTTQRLAAA 246

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YEISNH+  G  S HN  YW    + G G GA S        V ++  +   ++ +
Sbjct: 247 GLSRYEISNHARPGHASRHNRVYWSGAGWWGFGMGATS----APWGVRLARPRTRAAYAE 302

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQR 364
            +    H  + +  L  + +    L++GLR REG++++      G + D    R      
Sbjct: 303 WLDHPSHESIAEAGLPLDDR----LLVGLRRREGVTLQ------GLDADALVRRWQPFVE 352

Query: 365 QGFIERVQFSRLRCT-QRGMTMLDSVIANLAV 395
           +G++++ +  R   T   GM + + V+  + +
Sbjct: 353 RGWLQQ-RAGRWCLTDPEGMALSNPVLIEVIL 383


>gi|27364342|ref|NP_759870.1| coproporphyrinogen III oxidase [Vibrio vulnificus CMCP6]
 gi|27360461|gb|AAO09397.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           vulnificus CMCP6]
          Length = 463

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 44  ISDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 103

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I  ++  + + +T ++  EI+IE +P  + +    
Sbjct: 104 SLLQGRRVTQLHFGGGTPTFLSAKQITRLMTLLREEFTFTAEAEISIEVDPREIALEMLG 163

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+   F   + DLIY LPKQ
Sbjct: 164 HLRAEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVERAKQLGFRSTNLDLIYGLPKQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               +   L++ LS     LS++        LF    K  D  LP     + +   T + 
Sbjct: 224 DRDSFAKTLEQVLSMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPKAEEKMAILQNTIAT 282

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E   +  N     N+  Y      D +G G  A S +    
Sbjct: 283 LTDAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 342

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V    HA+ +   L  +      ++  L     +     E   
Sbjct: 343 AQN----QKELKKYYAQVNDLRHALWKGVALDGDDLLRREVIKQLICNFKLDKVAIEKQF 398

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +   + +LQ          +E V    +R T RG  ++ ++ 
Sbjct: 399 AVTFNQYFKEDLQLLQTFIDDALVE-VDEQAIRVTLRGRLLIRNIC 443


>gi|323499668|ref|ZP_08104636.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
 gi|323315269|gb|EGA68312.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
          Length = 462

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 164/406 (40%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +   ++ EI+IE +P  +E++   
Sbjct: 103 ALLQERKVTQLHFGGGTPTFLTKAQISRLMAILRGEFDFENDAEISIEVDPREIELDVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T T++   LQ+ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 223 TQTRFAETLQQVLKMEPGRLSIFNYAHMPQ-LFAAQRKIKDEDLPVAEEKMAILQDTIAT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S +    
Sbjct: 282 LTNAGYQFIGMDHFAQPDDELAVAQRNGILHRNFQGYTTQGEADLVGFGVSAISMIGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L S+      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVSEQRHALWKGVALDSDDLLRREVIKQLICNFKLDKTTIESEF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D++  +       +E V    +R T RG  ++ ++ 
Sbjct: 398 QVTFNDYFNEDLQLLQTFINDQLVE-VDDKEIRVTLRGRLLIRNIC 442


>gi|254508283|ref|ZP_05120406.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
 gi|219548800|gb|EED25802.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio
           parahaemolyticus 16]
          Length = 462

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 87/406 (21%), Positives = 165/406 (40%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  VSDYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLELEIRTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 ALLQERKVTQLHFGGGTPTFLTKAQISRLMAILRGEFCFEGDAEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRGEGFNRLSIGVQDFNKEVQKLVNREQDEAFIFAMVARAKELGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L++ L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 223 TKDSFAETLKQVLEMQPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPVAEEKMAILQDTIAT 281

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
            +  G     + + +           E + + N+  Y      D +G G  A S +    
Sbjct: 282 LTDAGYQFIGMDHFAQPDDELAVAQREGVLHRNFQGYTTQGEADLVGFGVSAISMIGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV----KDW 346
            +     +K  + +   V    HA+ +   L S+      ++  L     +       ++
Sbjct: 342 AQN----QKELKKYYAQVSDQRHALWKGVALDSDDLLRREVIKQLICNFKLDKTAIESEF 397

Query: 347 EMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +++       D+E  +       +E V    +R T RG  ++ ++ 
Sbjct: 398 DVIFNDYFKEDLELLQTFINDELVE-VDGKEIRVTLRGRLLIRNIC 442


>gi|240113301|ref|ZP_04727791.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae MS11]
 gi|240118633|ref|ZP_04732695.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID1]
 gi|240128848|ref|ZP_04741509.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268599380|ref|ZP_06133547.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae MS11]
 gi|268604346|ref|ZP_06138513.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID1]
 gi|268687230|ref|ZP_06154092.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268583511|gb|EEZ48187.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae MS11]
 gi|268588477|gb|EEZ53153.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID1]
 gi|268627514|gb|EEZ59914.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 473

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 160/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+        G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +  G E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPGDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|237719986|ref|ZP_04550467.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
 gi|229450538|gb|EEO56329.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
          Length = 335

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 174/338 (51%), Gaps = 10/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++      I +I+FGGGTPS +E ++   I D I +++ ++   EIT+EANP  +   
Sbjct: 1   MRKEYLKGEDIETIYFGGGTPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQE 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +       NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY L
Sbjct: 61  YLEMLSSLPFNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ ++D +   
Sbjct: 121 PGETKERWENDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLDFFTSL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN    G  S HN +YW+   Y+G GP AHS   +       SI  
Sbjct: 181 IEHLQKAGFEHYEISNFCRPGKYSRHNTSYWKGISYLGCGPSAHSFDGMTREWNVSSI-- 238

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             ++++K + ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C+
Sbjct: 239 --DTYIKGIEEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQ 295

Query: 360 RNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +      + G +E      LR T+ G+ + DS++++L 
Sbjct: 296 KMAAPYLKNGKLEEY-NGALRLTREGIFISDSIMSDLL 332


>gi|50118989|ref|YP_048156.1| coproporphyrinogen III oxidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609515|emb|CAG72948.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 86/405 (21%), Positives = 166/405 (40%), Gaps = 27/405 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A+++ +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQHAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FAGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+   F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR    +   LS++       +LF    K  D  LPS    +D+   T    +
Sbjct: 220 ESFAFTLQRVAELSPHRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQKLDILQQTIGSLT 278

Query: 245 AHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             G     + + +    E        +LH  N+  Y      D +G+G  A S +     
Sbjct: 279 QSGYQFIGMDHFARPDDELAVAQREGTLHR-NFQGYTTQGDSDLLGMGVSAISMIGD--- 334

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 +K  + +   V+  G+ +     L+ +      ++  L     +S    E    
Sbjct: 335 -NYAQNQKELKQYYAQVKDKGNGLWRGLQLTRDDCLRRDVIKTLICNFQLSYAPIEAEYA 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L   G ++  +   L  T +G  ++ ++ 
Sbjct: 394 IDFKTYFEQDLALLAPLVADGLVDSQEDG-LAVTPKGRLLIRNIC 437


>gi|94270554|ref|ZP_01291765.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
 gi|93450761|gb|EAT01819.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
          Length = 404

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 15/392 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             + + + G+Y+H PFC +KC YC F S   R      +++Q+   + + + +L   R  
Sbjct: 19  PREAATAPGIYLHIPFCHRKCDYCAFVSLPCRRPPV--SYLQALRRQARQLAELPWSRRQ 76

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDG----IAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              +IF GGGTP+      +A +L                 EIT+E NP ++ +   +  
Sbjct: 77  TFGTIFIGGGTPTSYPAAQLAALLAELRSLFCCRGAAGDEPEITVECNPGTITLEGLRQL 136

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R AGVNR+S+G+QS  +  L  +GR H+ + A+AA+ L R   F   + DL+Y LP Q++
Sbjct: 137 RAAGVNRLSIGIQSFADHLLTAVGRGHDRAAALAALKLVRQVGFEDYNLDLMYGLPGQSI 196

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             ++ +L  AL     HL+LYQLT E GT      + G   LPS+     +    + + +
Sbjct: 197 ADFKADLLTALEAEPTHLALYQLTPEAGTPLAVRLEAGQQTLPSDEACATMEAQARELLT 256

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
                 YE++N+S  G +  HNLNYW  G Y+G+G  A S +              P  +
Sbjct: 257 EMVYEQYEVANYSLPGYQCRHNLNYWHNGSYLGLGAAAFSSLAGLRLGNVNG----PGHY 312

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNL 362
            + +          E L  E    E ++MGLRL  G+ + + +               N 
Sbjct: 313 RRRLAAGRAPYATAEALGREAAFRETVIMGLRLSRGVEIAELQRRFALTPADYYGTMLNN 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                +      RL  ++R   + + V++ L 
Sbjct: 373 LLAAGLLVADNGRLALSRRAFPLANQVLSQLV 404


>gi|226357315|ref|YP_002787055.1| coproporphyrinogen dehydrogenase [Deinococcus deserti VCD115]
 gi|226319305|gb|ACO47301.1| putative Coproporphyrinogen dehydrogenase (Oxygen-independent
           coproporphyrinogen-III oxidase) [Deinococcus deserti
           VCD115]
          Length = 390

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/397 (28%), Positives = 184/397 (46%), Gaps = 43/397 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
            +YVH PFC   CPYCDF+   RR        ++++L  ++             + +++ 
Sbjct: 13  HLYVHVPFCPSICPYCDFHVLTRR-----AGLVEAYLHRLEQEAAWLSGTYALDLDTVYV 67

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  + I  +   + ++      +E T+E NP +V       +R  G +R S+G
Sbjct: 68  GGGTPSFLRDEEIRALATTVRRHLGW-GKLENTLEINPGTVSPGRAAHWRDLGFDRASVG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL + +LRFLGR H+A++A  A+        R+S DLI A+P Q +     +++  + 
Sbjct: 127 VQSLHDPTLRFLGRQHDAAQAREAVTTLVGSGFRVSGDLITAVPGQPLDS---DIRGLVD 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H+S Y LTIE GT F +   +      +E+     +  T+ + +A G   YE+SN+
Sbjct: 184 LGVGHVSAYTLTIEPGTEFARRGVN-----VTEDDERLGFERTEQLLTALGFGRYEVSNY 238

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR----------------VAISIEKH 300
           +  G ES HN  YW    Y+G+GPGA                                 H
Sbjct: 239 ARPGQESRHNQAYWHGRTYLGLGPGAAGHYPAVGKGGLPLPVPGSAVSSPVLTTRRTNPH 298

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              WL+        +   E+++        L MGLRLREG+++ D    AG ++  E   
Sbjct: 299 LHEWLQDAGGEVQPIDATEYVTDA------LFMGLRLREGVNLTDLSRRAGMDVAQEYAA 352

Query: 361 NLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            ++RQ   G + R   + LR T +G  +L+ V++   
Sbjct: 353 VIRRQVSRGLLVR-DGALLRATPQGWWVLNQVVSEFL 388


>gi|227327121|ref|ZP_03831145.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 163/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++  +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQQAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FVGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSDKAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+   F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR        LS++       +LF    K  +  LPS    +D+   T    +
Sbjct: 220 ESFAFTLQRVAELNPHRLSVFNYAHLP-SLFAAQRKIKEADLPSAEQKLDILQQTIGSLT 278

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           E   + N+  Y      D +G+G  A S +     +
Sbjct: 279 ESGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGMGVSAISMIGDSYAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V+  G+ +     L+ +      ++  L     +S    E     
Sbjct: 339 N----QKELKQYYAQVKDQGNGLWRGLQLTRDDCLRRDVIKTLICNFQLSYAPIEAEYAI 394

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L   G ++  +   L  T +G  ++ ++ 
Sbjct: 395 DFKTYFEQDLALLAPLVADGLVDSQEDG-LVVTPKGRLLIRNIC 437


>gi|301776703|ref|XP_002923785.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Ailuropoda melanoleuca]
          Length = 415

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 209/380 (55%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R  V +       +TE Q + +L+G + + S+FFGGG
Sbjct: 14  ALYVHWPYCEKRCSYCNFNKYIPRG-VEEAAMRSCLVTEAQTLLRLSGVQRVESVFFGGG 72

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ + +   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 73  TPSLASPNTVAAVLEAVDQISHLPADSEVTLEANPTSASGSKLAAFGAAGVNRLSIGLQS 132

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L   
Sbjct: 133 LDDTELRLLGRTHSASDALQTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQTLLGCC 192

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLT+E+GT  +   + G L  P   +  ++Y   +++    G   YE+SN + 
Sbjct: 193 DDHLSLYQLTLERGTALFTQVQRGTLPAPDPELTAEMYQEGRAVLREAGFRQYEVSNFAR 252

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKV----GSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+GIGPGAH R  +    G  R A      P++W+K V   GH+
Sbjct: 253 NGALSTHNWTYWQCGQYLGIGPGAHGRFVLQGAGGHTREARIQTLEPDNWMKEVMLFGHS 312

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
              +  L   +  +E L MGLR   GI+ + W+            G + +++        
Sbjct: 313 TRRRVPLGQLELLEEVLAMGLRTDVGITHQHWQQFEPQLNLWDVFGASREVKALLAQGL- 371

Query: 366 GFIERVQFSRLRCTQRGMTM 385
                +    LRC+  G+ +
Sbjct: 372 ---LLLDHRGLRCSWEGLAV 388


>gi|46198431|ref|YP_004098.1| coproporphyrinogen oxidase, anaerobic [Thermus thermophilus HB27]
 gi|46196053|gb|AAS80471.1| coproporphyrinogen oxidase, anaerobic [Thermus thermophilus HB27]
          Length = 365

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 124/378 (32%), Positives = 185/378 (48%), Gaps = 23/378 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   CPYCDF+  VRR     E +++    E Q + +   P  + +++ GGG
Sbjct: 3   SLYVHVPFCPTLCPYCDFH-VVRRGPGWVEAYLRRLKEEAQALHERF-PEPLRTLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +   +   W ++   E+T+EANP ++     +  +  GVNR+SLGVQS
Sbjct: 61  TPSYLRDRELVALFQSLP--WALAQGAEVTLEANPGTLSPGRLRLLQDLGVNRLSLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L+FLGR H    A+ A+ +A     R+S DLI  LP Q     E +L+ A    V
Sbjct: 119 FQDPVLKFLGRAHGRKGALRAVEMALEWGFRVSIDLILGLPMQ---DVEADLKEAARLGV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +EKGT F  +    D                + +    GL  YE+SN +  
Sbjct: 176 GHVSAYTLQVEKGTPFALLGLKED-----PEREAWAMERAEEVLGEAGLFRYEVSNFARE 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEK 318
           G E+ HNL YWR G ++ +GP A  +        A+     P   WL+     G A  E 
Sbjct: 231 GEEARHNLVYWRAGFWLALGPAATGQYPGEGGAYALRRTAPPLPRWLR-----GEAPKE- 284

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFSR 375
           E +S  + A E LM+GLRLREG+ V   E   G  L    +     L ++G + +V+  R
Sbjct: 285 EAISPLEHAKESLMLGLRLREGVDVGAVEERTGLALFPLLQGRAEELAQEGLL-QVRGKR 343

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T +   +L  V+  L
Sbjct: 344 LLPTPKAFPLLHRVVLAL 361


>gi|325295564|ref|YP_004282078.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325066012|gb|ADY74019.1| oxygen-independent coproporphyrinogen III oxidase
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 377

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 123/375 (32%), Positives = 201/375 (53%), Gaps = 19/375 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC KKCPYCDF S           + ++ L+  ++  +        +++FGGGTP
Sbjct: 12  YVHVPFCRKKCPYCDFYSV--EDFSFVSEYEKALLS--EFSLRNPEFTQFPTVYFGGGTP 67

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           S ++P     IL  I +        E+T+E NP  V +   +  ++ GVNRISLGVQS  
Sbjct: 68  STLKPNLFYSILSRIGQFS------EVTVELNPEDVNLCYLRNLKELGVNRISLGVQSFS 121

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +  L+ LGR   + + + A+ +   +F  +S D+IY  PKQT+ + E +L  ALS+ + H
Sbjct: 122 DNILKKLGRRQKSIDNLRALEIVFKVFSNVSIDIIYGAPKQTILELEKDLSIALSFPIKH 181

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           +SLY LT+ + T FYK  K+G L LP E    ++Y   +   ++ G   YEISN + LG 
Sbjct: 182 ISLYALTVYEETPFYKFMKEGKLKLPEEEKLSNMYYFIEEFLTSQGFKHYEISNFALLGF 241

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFL 321
           ES HNLNYW   +Y+GIG  A S V     R       + ++++K          ++E +
Sbjct: 242 ESKHNLNYWYLENYLGIGVSAGSYVN----RKYWKNTSNLKNYIKATLYRKELPEKEETI 297

Query: 322 -SSEQQADEFLMMGLRLREGISVKDWEML--AGRNLDIEC-ERNLQRQGFIERVQFSRLR 377
            S +++ +  L+MGLRL EG++++  ++L    + ++     R L  + F+   +   L+
Sbjct: 298 YSEKEEKELKLIMGLRLIEGVNLERIQLLDSFKKAIEKSNKIRILIEEEFLIFKEP-ILK 356

Query: 378 CTQRGMTMLDSVIAN 392
             ++G+   ++VI+ 
Sbjct: 357 LGKKGLFTSNAVISE 371


>gi|261367283|ref|ZP_05980166.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
 gi|282570886|gb|EFB76421.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
          Length = 356

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 189/381 (49%), Gaps = 29/381 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +S G+Y+H P+C  KC YCDF S      V Q  ++ + L E++        R   +++F
Sbjct: 2   DSFGIYLHIPYCKSKCRYCDFYSAPGALGVPQ-PYVDALLRELE-----KNRRRPDTLYF 55

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+ P  +++++  +          EIT+EANP +V   + QG+R AGV RIS G
Sbjct: 56  GGGTPALLSPAQVSILIQAVNPL----PGSEITLEANPDAVTPQSLQGFRAAGVTRISFG 111

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS ++  L+ LGR H A+ A  A+  AR   FP +  D++ ALP  +  +++  L    
Sbjct: 112 VQSADDVQLKRLGRTHTAAGAAEALQWARQAGFPEICGDIMLALPNYSNAEFDATLDLLQ 171

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                H+S Y L IE GT F K   DG   LP  + A D Y       +  G   YEISN
Sbjct: 172 QGGCTHISAYLLKIEPGTAFAKFPPDG---LPGPDEAADFYLYAVKRLAEAGYQQYEISN 228

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            S  G E  HNL YW   DY G+GP AHS ++         ++            +G AV
Sbjct: 229 FSRPGHEGRHNLLYWNCRDYRGVGPAAHSCIQNVRRYWPDDVQSFL---------DGRAV 279

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQF 373
            ++E    +  A++FL+M LRL  G+ + ++    G      +   R+    G+      
Sbjct: 280 EQEE---GQCDAEDFLLMQLRLNRGLDLDEYAQWGGHFTKAQMAFLRHCVASGY-ALFDG 335

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           SRLR T  GM + ++++  L 
Sbjct: 336 SRLRLTPSGMIVQNAILEALI 356


>gi|194099404|ref|YP_002002505.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
 gi|193934694|gb|ACF30518.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae NCCP11945]
          Length = 473

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 160/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+        G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIKYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +  G E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPGDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|94264366|ref|ZP_01288157.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
 gi|93455195|gb|EAT05411.1| Putative oxygen-independent coproporphyrinogen III oxidase [delta
           proteobacterium MLMS-1]
          Length = 404

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 15/392 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             + + + G+Y+H PFC +KC YC F S   R      +++Q+   + + + +L   R  
Sbjct: 19  PREAATAPGIYLHIPFCHRKCDYCAFVSLPCRRPPV--SYLQALRRQARQLAELPWSRRQ 76

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDG----IAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              +IF GGGTP+      +A +L                 EIT+E NP ++ +   +  
Sbjct: 77  TFGTIFIGGGTPTSYPAAQLAALLAELRSLFCCRGAAGDEPEITVECNPGTITLEGLRQL 136

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R AGVNR+S+G+QS  +  L  +GR H+ + A+AA+ L R   F   + DL+Y LP Q++
Sbjct: 137 RAAGVNRLSIGIQSFADHLLTAVGRGHDRAAALAALKLVRQVGFEDYNLDLMYGLPGQSI 196

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             ++ +L  AL     HL+LYQLT E GT      + G   LPS+     +    + + +
Sbjct: 197 ADFKADLLTALEAEPTHLALYQLTPEAGTPLAVRLEAGQQALPSDEACATMEAQARELLT 256

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
                 YE++N+S  G +  HNLNYW  G Y+G+G  A S +              P  +
Sbjct: 257 EMVYEQYEVANYSLPGYQCRHNLNYWHNGSYLGLGAAAFSSLAGLRLGNVNG----PGHY 312

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNL 362
            + +          E L  E    E ++MGLRL  G+ + + +               N 
Sbjct: 313 RRRLAAGRAPYATAEALGREAAFRETVIMGLRLSRGVEIAELQRRFALTPADYYGTMLNN 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                +      RL  ++R   + + V++ L 
Sbjct: 373 LLAAGLLVADNGRLALSRRAFPLANQVLSQLV 404


>gi|269792377|ref|YP_003317281.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100012|gb|ACZ18999.1| oxygen-independent coproporphyrinogen III oxidase
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 366

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 123/378 (32%), Positives = 188/378 (49%), Gaps = 22/378 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G   + +YVH PFC +KC YC F S     K  QE +++    EM    +      + +I
Sbjct: 2   GERGISIYVHVPFCTRKCLYCSFPS-APMGKGDQEAYLEGLSKEMGSWSRQLRRPRVHTI 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNR 132
           +FGGGTPS + P     ++  + +++ +S   EIT EANP S+ V+  + + +   G  R
Sbjct: 61  YFGGGTPSKLSPGGWERLMGDLGQSFDLSGVREITFEANPESLGVDLLKCWTEVSPGPLR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +SLGVQS  ++ LR LGR H AS+A+ A  +       +S DL++ LP Q++  +   L+
Sbjct: 121 VSLGVQSFLDRELRRLGRVHTASDAVRASEMVLRAGIPLSVDLMFRLPGQSLRDFSYSLK 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   VDHLS Y+LT+E+GT F  M    DL LP +      Y   Q      G   YE
Sbjct: 181 MAVGLGVDHLSAYELTVEEGTPFGDM----DLELPPD--GYGFYRYLQWYLGRRGFVQYE 234

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN +  GA  +HNL YW  GD++G+GPGA S +    +    S       WL++V  +G
Sbjct: 235 VSNFARPGAFRVHNLRYWLGGDFLGLGPGAWSCIGEARYGNHPS----LGGWLRLVEASG 290

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-ERNLQRQGFIERV 371
                 E L   ++  E  ++ LR   G + +      GR+  + C    L   G +  +
Sbjct: 291 RGTCCGEILEGARRRAERAILALRTSFGWAPE------GRDDPLACRLEPL--MGDLVAL 342

Query: 372 QFSRLRCTQRGMTMLDSV 389
           Q  R   T RG  + + +
Sbjct: 343 QGGRYVLTPRGFRVANLI 360


>gi|73966371|ref|XP_851668.1| PREDICTED: similar to radical S-adenosyl methionine domain
           containing 1 [Canis familiaris]
          Length = 484

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 19/375 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN ++ R  V +       +TE Q + +L+G R + S+FFGGGTPSL 
Sbjct: 88  WPYCEKRCSYCNFNKYIPRG-VEEAAVRSCLVTEAQTLLRLSGVRRVESVFFGGGTPSLA 146

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +A +L+ + +   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL++  
Sbjct: 147 SPSTVAAVLEAVDQAAHLPADSEVTLEANPTSAPSSRLAAFGAAGVNRLSIGLQSLDDTE 206

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ LGR H++ +A+  +  AR +FP R+S DL+  LP Q +  W  +L+  L    DH+S
Sbjct: 207 LQLLGRTHSSRDALQTLAEARRLFPGRVSVDLMLGLPAQQVGPWLRQLRTLLGCCDDHIS 266

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLT+E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN +  GA S
Sbjct: 267 LYQLTLERGTELFTQVQRGTLSAPDPELAAEMYQEGRALLRDAGFRQYEVSNFARNGALS 326

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEKE 319
            HN  YW+ G Y+G+GPGAH R      G H     I+   P++W+K V   GH    + 
Sbjct: 327 THNWTYWQCGQYLGVGPGAHGRFAPQGAGDHTREARIQTLEPDNWMKEVMLFGHGTRRRI 386

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQGFIER 370
            LS  +  +E L MGLR   GI+ + W+            G + ++   + L  QG I  
Sbjct: 387 PLSKLELLEEVLAMGLRTDVGITHQHWQQFEPQLSLWDVFGASQEV---KALLVQG-ILL 442

Query: 371 VQFSRLRCTQRGMTM 385
           +    LRC+  G+ +
Sbjct: 443 LDHRGLRCSWEGLAV 457


>gi|152980463|ref|YP_001353317.1| oxygen-independent coproporphyrinogen III oxidase
           [Janthinobacterium sp. Marseille]
 gi|151280540|gb|ABR88950.1| oxygen-independent coproporphyrinogen III oxidase
           [Janthinobacterium sp. Marseille]
          Length = 487

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 85/411 (20%), Positives = 166/411 (40%), Gaps = 28/411 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A          + L +Y+H PFC   C YC  N  V + +    N++     E++ 
Sbjct: 54  DYLQAVTGATARGNMHPLSLYIHIPFCESICYYCGCNKIVTKDRSKAANYLVYLKREIEM 113

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
             +L  G   +  + FGGGTP+ +    +  ++  + + ++ + +   E +IE +P +V 
Sbjct: 114 QGKLLAGSNQVEQLHFGGGTPTYLTDAQMGELMLHLRRWFSFAPDAEGEYSIEVDPRTVT 173

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                G R+ G NRISLGVQ  + +  + + R    SE +A +  AR   F  +S DLIY
Sbjct: 174 PERVHGLRRQGFNRISLGVQDFDAEVQKAVNRIQPESETVAIMDAARAAGFRSVSIDLIY 233

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +   E  L++ ++   D +++Y        LF    +  +  LP     +++  
Sbjct: 234 GLPKQNLHTMEQTLEKVIAANPDRIAIYNYAHMPH-LFKPQRRIAEADLPDGETKLEMLA 292

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G        +   + N+  Y      D +  G  A S 
Sbjct: 293 LCIQRLNDAGYIYIGMDHFAKPGDDLAIAQRQGRLHRNFQGYSTHVGADLVSCGVSAISA 352

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     +      K  + + + + +N   +     L+ +      ++  L     +S+  
Sbjct: 353 IGATYSQNV----KTLDEYYEHIEQNELPIARGIKLNMDDLLRRIIIQMLMCNFELSIAS 408

Query: 346 WEMLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            E+      +   E      R L++ G +  +    +  T +G  ++ ++ 
Sbjct: 409 IELAYPIVFNSYFEAELRKLRELEQSGLLS-IDEEWITVTPKGRLLIRNIC 458


>gi|309775635|ref|ZP_07670635.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916729|gb|EFP62469.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 367

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/378 (29%), Positives = 189/378 (50%), Gaps = 25/378 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           YVH PFC   C YCDF +  R +    E ++ +   E+    +     ++ +++ GGGTP
Sbjct: 5   YVHVPFCRDICAYCDF-TRCRYHAGLAEQWLIAIEKELH---EKLAESALETMYIGGGTP 60

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           S ++ + +  +L  ++     +   E T+EAN  S++    +     GVNRISLGVQSL+
Sbjct: 61  SALQLEQLNRLLQLLSPYT--ARVQEYTVEANVESLDEEKMELLHSYGVNRISLGVQSLQ 118

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS-YAV 199
            Q L  + R H+ +E +  IH         +S DLIY LP+Q+M  W+ +LQ  +  + +
Sbjct: 119 PQLLSIINRQHSKAEVVQRIHQLHAHGIHNISIDLIYGLPQQSMAMWKQDLQEIVQQFPI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY LTIE+ + F +      +     ++  D+Y         HG   YEISN +  
Sbjct: 179 SHISLYALTIEEHSQFGR----DGVKNIDADMEADMYVYAVEYLQKHGFEQYEISNFAKP 234

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S+HN  YWRY D+ GIG GA  + +   +    ++  +         + G      E
Sbjct: 235 GCASMHNQMYWRYEDFCGIGCGASGKSRHIRYDNTCNLHTYL--------QKGSCPDIVE 286

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRL 376
            LS E +  E LMM LR+++G+S+  ++ +   +L+      LQ+   +G + +++   +
Sbjct: 287 -LSREDEMFEMLMMSLRMKQGVSLSRFKEVFHADLETVYHEALQKNIERGML-QIEDGHV 344

Query: 377 RCTQRGMTMLDSVIANLA 394
           R T  G+ +L  V+ +  
Sbjct: 345 RTTWEGLLLLHDVLIDFL 362


>gi|34499103|ref|NP_903318.1| coproporphyrinogen III oxidase [Chromobacterium violaceum ATCC
           12472]
 gi|34104954|gb|AAQ61310.1| oxygen-independent coproporphyrinogen III oxidase [Chromobacterium
           violaceum ATCC 12472]
          Length = 468

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 88/408 (21%), Positives = 154/408 (37%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL        G     L +Y H PFC   C YC  N  + +     + ++     E+  
Sbjct: 46  DYLDKLRQRQIGANRKPLSLYAHIPFCNTICYYCACNKIITKDSSKADLYLDYLEKEISL 105

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  +  + FGGGTP+ +    +  ++  +  ++   S+ E +IE +P  V+  
Sbjct: 106 VSAELGFREKVIQLHFGGGTPTFLSDAQLERLMGILGTHFEFMSDGEYSIEIDPRKVKRE 165

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
                   G NR+S+G+Q  +    + + R     E  A I  AR   F  +S DLIY L
Sbjct: 166 TMLKLADYGFNRVSVGIQDFDPAVQQAVNRVQTVEETRAVIDAAREGGFKSVSLDLIYGL 225

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q+       LQ+AL+   D LSLY       ++F    +  +  LPS  + +D+    
Sbjct: 226 PLQSRETMRDTLQKALALDPDRLSLYNYAHLP-SVFKPQRRINEAELPSAALKLDILQDA 284

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +           +     N+  Y      D +  G  +  +V 
Sbjct: 285 VKTLTDAGYVFIGMDHFAKPDDELAVALRQGRLQRNFQGYSTHADCDMLAFGVSSIGKVG 344

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     +K  E +   + +    VV    L S+      ++  L  R  +SV+  E
Sbjct: 345 SCYSQN----DKTLEGYYAALDQGRLPVVRGLTLDSDDVLRRTIIQSLMCRFALSVEAIE 400

Query: 348 MLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            + G N            R  Q+QG +       L    +G  ++ ++
Sbjct: 401 EVHGINFAQYFAAEMPQIREFQQQGLLS-FDGDFLMVEPKGRFLIRNI 447


>gi|262406870|ref|ZP_06083419.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_22]
 gi|262355573|gb|EEZ04664.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_22]
          Length = 335

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 10/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++      I +I+FGGGTPS +E ++   I D I K++ ++   EIT+EANP  +   
Sbjct: 1   MRKEYLKGEDIETIYFGGGTPSQLEKEDFEQIFDTIRKHYGLNHCQEITLEANPDDLSQE 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                     NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY L
Sbjct: 61  YLGMLSSLPFNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L 
Sbjct: 121 PGETKERWENDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN    G  S HN +YW+   Y+G GP AHS   +       SI  
Sbjct: 181 IEHLQKAGFEHYEISNFCRPGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI-- 238

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             ++++K + ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C+
Sbjct: 239 --DTYIKGIEEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQ 295

Query: 360 RNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +      + G +E      LR T+ G+ + DS++++L 
Sbjct: 296 KMAAPYLKNGKLEEY-NGALRLTREGIFISDSIMSDLL 332


>gi|218768848|ref|YP_002343360.1| coproporphyrinogen III oxidase [Neisseria meningitidis Z2491]
 gi|121052856|emb|CAM09208.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis Z2491]
          Length = 473

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 158/407 (38%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+ A      G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEFLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    I  +   I K++ +    E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDDQIERVFRMIRKHFELIPTGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|262273187|ref|ZP_06051003.1| coproporphyrinogen III oxidase oxygen-independent [Grimontia
           hollisae CIP 101886]
 gi|262222765|gb|EEY74074.1| coproporphyrinogen III oxidase oxygen-independent [Grimontia
           hollisae CIP 101886]
          Length = 457

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 169/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++         +L +YVH PFC   C YC  N  + R+    + ++ +   E++    
Sbjct: 39  AEFDMACAQYPDRNLSLYVHIPFCHTLCYYCGCNKVITRHAHKADQYLDALELEIRQRAY 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ +    I+ ++  + + + ++++ EI+IE +P  +E++    
Sbjct: 99  LLRDRNVTQLHWGGGTPTFLSKAQISRLMSLLREEFRLNADAEISIEVDPREMELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ  ++   + + R  + +   A +  A+   F   + DLIY LP Q 
Sbjct: 159 LRSEGFNRLSIGVQDFDKTVQKAVNREQDEAFIKAMVMRAKALGFRSTNLDLIYGLPHQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ L+     LS++        LF    K  +  LPS    + +   T +  
Sbjct: 219 SETFAKTLEQVLTMQPGRLSVFNYAHLPQ-LFAAQRKIKEANLPSPQEKLAMLEQTINTL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TDAGYQFIGMDHFALPDDELAVAQREGVLHRNFQGYTTQGDCDLLGLGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V +  HA+ +   L  +      ++  L     ++ +  E    
Sbjct: 338 QN----QKALKKYYHQVDEQRHALWKGVMLDGDDLLRREVIKSLICNFTLNKRAIEQAFD 393

Query: 352 RNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N D     +LQ        G +  V    L+ T +G  ++ ++ 
Sbjct: 394 INFDTYFAEDLQLLQCFIDDGLV-MVDNDTLQVTLKGRLLIRNIC 437


>gi|269121914|ref|YP_003310091.1| oxygen-independent coproporphyrinogen III oxidase [Sebaldella
           termitidis ATCC 33386]
 gi|268615792|gb|ACZ10160.1| oxygen-independent coproporphyrinogen III oxidase [Sebaldella
           termitidis ATCC 33386]
          Length = 357

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 34/382 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF + +          I  +   +    +L       +++FGGG
Sbjct: 3   ALYIHIPFCDKKCFYCDFWTFINMGHE-----IDRYTDYIIKESRLYPVYYYDTVYFGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP LI   N A IL  +     V  N E+T E NP +    +F+ YRKAGVNR+S+G+QS
Sbjct: 58  TPGLIGADNFAKILSALK----VKENAEVTAEINPLNYSTEDFRNYRKAGVNRLSIGIQS 113

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+  GRNHN ++A+     AR   F  ++ DL++ +P QT+     +++     +
Sbjct: 114 FQDHVLKTAGRNHNGTQALETYRKAREAGFENITVDLMFGIPGQTLEDVYNDIKIIKEIS 173

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L  E+GTLF+K  ++G +     ++   +Y       +  G   YEISN + 
Sbjct: 174 PDHISVYSLIWEEGTLFWKQRENGLIEEADIDLEARMYETIIEELTKDGYIHYEISNFAK 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ++ HN  YW   ++IG+G  + S      ++   ++ K    + KM+      +   
Sbjct: 234 PGKKARHNTKYWENKEFIGLGVNSSSYYNDQRYKNLKNLYK----YYKMIDNKELPIDIS 289

Query: 319 --EFLSSEQQADEFLMMGLRLRE-GISV---KDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             E +   ++    +++GLRL + GI        E L G              G +++ +
Sbjct: 290 SLENVDRAEKEKMKIILGLRLLDTGIPYFNDSRVEKLFG-------------NGLLKK-E 335

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            +R+  T++G+ + + V     
Sbjct: 336 NNRIILTKKGVMLANEVFVEFI 357


>gi|323142976|ref|ZP_08077684.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Succinatimonas hippei YIT 12066]
 gi|322417249|gb|EFY07875.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Succinatimonas hippei YIT 12066]
          Length = 378

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/379 (31%), Positives = 191/379 (50%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H+PFC+ KCPYCDFNS+ +     ++  +      +  + +     R   S+F GG
Sbjct: 12  GLYIHYPFCMHKCPYCDFNSYAKGIDESRDELYFLRLKEDFLFWKPKLKDRKFISVFIGG 71

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL + + I   +D IA    +S + EIT+EANP +V++N  + ++ AG+NR+SLGVQ
Sbjct: 72  GTPSLCKAELIGNFIDFIAPY--LSKDCEITMEANPGTVDINKLKDFKTAGINRLSLGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S ++  L+ +GR H+A+ A  A   A    F   + DL++ LP Q++     +++ A + 
Sbjct: 130 SFDDALLKRIGRIHDAAAAKKACEDADKCAFSAFNIDLMHGLPGQSLEAALHDIKIAAAL 189

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y+LTIE+ T F K        LPSE+    +     ++  + G + YE+S  S
Sbjct: 190 NCSHLSWYELTIEEDTYFGK----HTPTLPSEDELYAIEEKGFALLKSLGFNRYEVSAFS 245

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                 +HN NYWR+GDY+GIG GAHS++  GS  +  +    P  +LK         VE
Sbjct: 246 REKH-CVHNENYWRFGDYVGIGAGAHSKLFNGSTTIRRACPASPSDYLKG-DFGKFYTVE 303

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE--CERNLQRQGFIERVQFSR 375
                      E+++  LRL   I   ++++  G++  +             IE      
Sbjct: 304 -----DSDIPFEYMLNRLRLFNDIKTFEYKLHTGQDFSLVKGVLDKAASLSLIEFKDDET 358

Query: 376 LRCTQRGMTMLDSVIANLA 394
              T  G  ML+ ++    
Sbjct: 359 YCVTAYGRQMLNDILEMFL 377


>gi|261823705|ref|YP_003261811.1| coproporphyrinogen III oxidase [Pectobacterium wasabiae WPP163]
 gi|261607718|gb|ACX90204.1| oxygen-independent coproporphyrinogen III oxidase [Pectobacterium
           wasabiae WPP163]
          Length = 457

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 84/404 (20%), Positives = 165/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A+++ +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQHAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FVGRTVTQLHWGGGTPTYLNKVQISRLMSLLRELFSFSEQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+   F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR    +   LS++       +LF    K  D  LPS    +D+   T    +
Sbjct: 220 ESFAFTLQRVAELSPHRLSVFNYAHLP-SLFAAQRKIKDADLPSAEQKLDILQQTIGSLT 278

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           E   + N+  Y      D +G+G  A S +     +
Sbjct: 279 QSGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGMGVSAISMIGDSYAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V+  G+ +     L+ +      ++  L     +S    E     
Sbjct: 339 N----QKELKQYYAQVKDKGNGLWRGLQLTRDDCLRRDVIKTLICNFQLSYAPIETEYAI 394

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L   G ++  +   L  T +G  ++ ++ 
Sbjct: 395 DFKTYFEQDLALLAPLVADGLVDSQEGG-LVVTPKGRLLIRNIC 437


>gi|260775071|ref|ZP_05883970.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608988|gb|EEX35148.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 462

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 86/406 (21%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E+    
Sbjct: 43  IADYDMACTEYPERPLSLYIHIPFCHKLCYYCGCNKVITRHAHKADEYLDVLEQEILTRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ +++ +   ++  +  EI+IE +P  +E++   
Sbjct: 103 SLLQGRKVTQLHFGGGTPTFLTKAQISRLMNILRAEFSFEAESEISIEVDPREIELDMLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLREEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMVERAKKLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  ++   L + L      LS++        LF    K  D  LP     + +   T + 
Sbjct: 223 TQARFAETLAQVLEMQPGRLSIFNYAHMPQ-LFAAQRKIKDEDLPQAEEKMAILQDTIAT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S +    
Sbjct: 282 LTNAGYQFIGMDHFAQPDDELAVAQRNGILHRNFQGYTTQGECDLVGFGVSAISMIGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNEQRHALWKGVALDGDDLLRREVIKQLICNFKLDKVSVETEF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+E  +       +E V    +R T RG  ++ ++ 
Sbjct: 398 DVEFNHYFKEDLELLQTFIDDELVE-VDNKEIRVTLRGRLLIRNIC 442


>gi|166032759|ref|ZP_02235588.1| hypothetical protein DORFOR_02474 [Dorea formicigenerans ATCC
           27755]
 gi|166027116|gb|EDR45873.1| hypothetical protein DORFOR_02474 [Dorea formicigenerans ATCC
           27755]
          Length = 328

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 28/350 (8%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           ++S   +++    L     + SIF GGGTPS +    +  I   +   + V  N EIT+E
Sbjct: 1   MKSLCQDIRSYAHLAKACRVISIFVGGGTPSTLTAFQMQQIFSAVRDTFVVEENAEITVE 60

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPR 170
            NP +V+     GY+K G+NR+S+G+QS + + L+ LGR H   E +   H+AR   F  
Sbjct: 61  MNPGTVDREKLSGYKKCGINRLSIGLQSTKNRELQILGRIHTYEEFLETYHMARAEGFEN 120

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--KDGDLVLPS 228
           ++ DL+ A+P Q++T WE  L+     A +H+S Y L +E+GT FY+ +        LP 
Sbjct: 121 INVDLMSAIPGQSLTDWEENLKTVAELAPEHISAYSLIVEEGTPFYEEYGEGRHADELPD 180

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           E     +Y  T+ I S +G   YEISN++  G    HN+ YW   +Y+GIG GA S +  
Sbjct: 181 EETERKMYWRTKEILSKYGYERYEISNYAKPGYACRHNIGYWERTEYLGIGTGAASLINN 240

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                                       E E L+   Q +E + +GLR+ +G+S  ++  
Sbjct: 241 SRFNYG---------------------EEPEKLTVSAQMEETMFLGLRMMKGVSKIEFLK 279

Query: 349 LAGRNLDIE---CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           + G +++       R+++++G +E  +   ++ T RG+ + + V++   +
Sbjct: 280 MYGESMENVYGNVIRDMEQKGLLEDGE-DFVKLTDRGIDVSNYVMSEFLL 328


>gi|227113282|ref|ZP_03826938.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 457

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 84/404 (20%), Positives = 164/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++  +       L +Y+H PFC + C +C  N  V R +   + ++     E++    L
Sbjct: 40  AFQQAIARYPQRPLSLYIHIPFCHRLCYFCGCNKLVTRQQHKADEYLDVLELEIRQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R+++ + +GGGTP+ +    I+ ++  + + ++ S   E+++E +P  +E++     
Sbjct: 100 FVGRTVTQLHWGGGTPTYLNKVQISRLMSLLREQFSFSDQAELSLEVDPREIELDVLDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A I  A+   F   + DLIY LPKQT 
Sbjct: 160 RAEGFNRLSMGVQDFNKDVQKLVNREQDEDFIFALIERAKALGFTSTNIDLIYGLPKQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQR    +   LS++       +LF    K  +  LPS    +D+   T    +
Sbjct: 220 ESFAFTLQRVAELSPHRLSVFNYAHLP-SLFAAQRKIKEADLPSAEQKLDILQQTIGSLT 278

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           E   + N+  Y      D +G+G  A S +     +
Sbjct: 279 QSGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDSDLLGMGVSAISMIGDSYAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V+  G+ +     L+ +      ++  L     +S    E     
Sbjct: 339 N----QKELKQYYAQVKDQGNGLWRGLQLTRDDCLRRDVIKTLICNFQLSYAPIEAEYAI 394

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L   G +E  +   L  T +G  ++ ++ 
Sbjct: 395 DFKTYFEQDLALLAPLVADGLVESQEDG-LMVTPKGRLLIRNIC 437


>gi|290513116|ref|ZP_06552479.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
 gi|289774498|gb|EFD82503.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella sp.
           1_1_55]
          Length = 457

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 171/407 (42%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  AEFDAAVARYPQRPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +  + +GGGTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++    
Sbjct: 99  LFASRQVKQLHWGGGTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +     +H AR I F   + DLIY LPKQT
Sbjct: 159 LRTEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+      D LS++       TLF    K  D  LPS    +++   T    
Sbjct: 219 PESFAFTLQKVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAEQKLEILQETIGSL 277

Query: 244 SAHGLHAYEISNHSFLGAE----SLH---NLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +A G     + + +    E      H   + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFARPDDELAVAQRHGILHRNFQGYTTQGDTDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK------- 344
           +     +K  + + + V + G A+     L+ +      ++  L     + ++       
Sbjct: 338 QN----QKELKLYYQQVAEQGDALWRGIALTRDDCLRRDVIKALICNFRLDIEAVEAQWD 393

Query: 345 -DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            D++     +L  +    L   G +  V    ++ T +G  ++ ++ 
Sbjct: 394 VDFQSYFAEDL--KLLAPLAHDGLVA-VDDKAIQVTAKGRLLIRNIC 437


>gi|239622054|ref|ZP_04665085.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515245|gb|EEQ55112.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 385

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 164/366 (44%), Gaps = 41/366 (11%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +S++FFGGGTP+++  +++  +LD + K W ++ + EIT EANP +V           G
Sbjct: 15  PVSTVFFGGGTPTILAARDLVAMLDAVRKIWGIAPDAEITTEANPDTVNEYYINELAAGG 74

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
             R+S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W  
Sbjct: 75  FTRVSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRT 134

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +  A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL 
Sbjct: 135 SVTTAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLE 194

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK---------------------- 287
            YE+SN +  G ES HNL YWR  D+ G+GPGAHS                         
Sbjct: 195 WYEVSNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYNAVTEADHPQSASLTAPAGGGCP 254

Query: 288 --------VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
                     SH +      HP  W   + +N     + E ++ E+  +E +M+GLRL E
Sbjct: 255 ADAGLGVVSVSHGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLRLHE 314

Query: 340 GISVKDWEM-----------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           G+ +                   R + ++    +  +G I      R+  T+RG  + DS
Sbjct: 315 GLDLDRINRAINDAGMSSTPQTLRTVSVDQLAPMVSEGLITVSDNHRVVPTRRGRLLNDS 374

Query: 389 VIANLA 394
           VI    
Sbjct: 375 VIEQFF 380


>gi|237734840|ref|ZP_04565321.1| coproporphyrinogen III oxidase [Mollicutes bacterium D7]
 gi|229382168|gb|EEO32259.1| coproporphyrinogen III oxidase [Coprobacillus sp. D7]
          Length = 374

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 104/380 (27%), Positives = 184/380 (48%), Gaps = 25/380 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF   V   +   ++++     E+Q    L     + +I+ GGG
Sbjct: 15  SLYLHIPFCEQICAYCDFCK-VFYNEHQADDYLAVLKHELQ---ALNITEPLKTIYIGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  ++D I    + S   E++IE NP S++       ++ GV+R+S+GV++
Sbjct: 71  TPSSLNDEQLEWLMDIIKPYIS-SETKEVSIEVNPESIDYYKLDILKRGGVSRLSIGVET 129

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ + R H + +    I  AR I F  +S DL+Y LP QT+T  + +L +     
Sbjct: 130 FNDILLKKINRQHTSIQVERIIDYARKIGFNNISIDLMYGLPNQTITDIKNDLAKVRQLP 189

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E  T+   +    +     E V   +  L +        H YEISN + 
Sbjct: 190 IEHISYYSLILEDHTVLKNL----NYQPLDEEVESKITQLIEESLEQIDFHKYEISNFAK 245

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ESLHNL YW+Y +Y GIG GA  ++        I   ++  ++L+         + K
Sbjct: 246 TGYESLHNLAYWQYDNYYGIGVGASGKIDDCL----IEHNRNLNAYLRRQN-----TITK 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIERVQFS 374
              S E+     LMM LRL +G+ +K++E   G           +++L+ +  +  ++  
Sbjct: 297 MINSKEETMFNHLMMSLRLVKGLDLKEFEKRYGLRAVDVYQTAIDKHLKMKTLV--IEND 354

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L  T   + +L+ ++ +  
Sbjct: 355 YLHATSESIKLLNEILIDFL 374


>gi|291557745|emb|CBL34862.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium siraeum V10Sc8a]
          Length = 364

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 174/373 (46%), Gaps = 20/373 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC+ KCPYCDF S           +  + +  ++            +++FGGG
Sbjct: 4   GLYIHIPFCLSKCPYCDFYSVAFDSDTAN-RYKDAVIRNLRCYLSQNENLRFDTVYFGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+  + I  I+D I     ++S  EIT+EANP   + N     +   VNRIS G+QS
Sbjct: 63  TPILL-WREICDIMDEIQPY--IASGAEITVEANPCCTDENALCSLKTHNVNRISFGLQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ LGR HN+     A+ +A    F  +S D++  +P QT       +    S  
Sbjct: 120 GIDNELKALGRRHNSKVGADAVKMAYKAGFDNISGDIMLGIPLQTSDSLIETINYMTSLP 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L IE  T F K H    L+LP E+   ++Y  T    S  G   YEISN + 
Sbjct: 180 LSHISAYMLKIEPDTPFSKRH----LILPDEDGYANIYLETIERLSDKGFRQYEISNFAK 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            GA+S HNL YWR  +Y+GIGP AHS        V   +    ES ++        + E+
Sbjct: 236 TGAKSRHNLRYWRCEEYLGIGPAAHSYFNGERFAVGRDLRAFIESEVQPA-----VITER 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER-NLQRQGFIERVQFSRLR 377
           E        +E+ M+ LRL EG+     E   G   D   ++  L       +     + 
Sbjct: 291 ECGD----YEEWAMLKLRLSEGLDFDTAEKRFGITKDDILKKCRLIPDDL-YKTDDKTIS 345

Query: 378 CTQRGMTMLDSVI 390
            T +G  + ++VI
Sbjct: 346 LTPKGFLVSNAVI 358


>gi|302380760|ref|ZP_07269225.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ACS-171-V-Col3]
 gi|302311703|gb|EFK93719.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ACS-171-V-Col3]
          Length = 367

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 17/379 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC  KC YCDF S + +     + + +    E+   +       I +I+ GGG
Sbjct: 3   GIYIHIPFCDYKCNYCDF-STMTKQYNRVDEYFRLLQKEITIYKN--PNEKIDTIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++ + I  I + + K++ +    E TIE NP  V       Y+  GV+RISLGVQS
Sbjct: 60  TPNLVDSKYIKEIYNLLNKSFDL-QIKEFTIECNPEFVTKEKIVSYKSIGVDRISLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++  RFLGR H  ++ + +  + +     +S DLI+  P QT+   + +L+       
Sbjct: 119 FNDEYNRFLGRGHKVTDVLKSFDIIKQYIDNISIDLIFGFPNQTLESLDNDLKYIRKLTP 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y + +E GT FYK ++D +    ++++  ++Y            + YEISN +  
Sbjct: 179 NHISWYNMILEPGTKFYKDYEDINR---NDDIEYEMYVKICKGLE--DYNHYEISNFAKD 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             ES HN  YW+  +Y G G  +   +    +           ++ + +      +   E
Sbjct: 234 DFESKHNKIYWKDENYYGFGLSSSGYINQKRYTNEF----FYPNYKRKIINEQKPINFSE 289

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRL 376
            +  E++  EF++  +RL+EG+ +K++    G +L   +        ++  +  ++ + L
Sbjct: 290 NIDLEKREFEFIITNMRLKEGLDLKEYNRKFGIDLYKNNKNMIDKWIKERLLT-LENNHL 348

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T +G  + ++   ++ V
Sbjct: 349 SFTDQGFFISNTFFIDILV 367


>gi|289676366|ref|ZP_06497256.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 306

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 102/314 (32%), Positives = 166/314 (52%), Gaps = 12/314 (3%)

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  +L G+ +    +S++EIT+EANP + E   F  YR  G+NR+S+G+QS EE  L
Sbjct: 1   ADALGRLLKGVEQRIRFASDIEITLEANPGTFEQAKFSAYRGLGINRLSIGIQSFEESKL 60

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + LGR HN  EAI A  +AR   F   + DL++ LP Q+  +   +L++A++ A  HLS 
Sbjct: 61  KALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQDEALADLRQAIALAPTHLSW 120

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           YQLT+E  T+F+         LP +++  D+    Q + + HG   YE+S ++  G  + 
Sbjct: 121 YQLTLEPNTVFWNQPPM----LPEDDILWDIQETGQQLLATHGYAQYEVSAYAQPGKPAR 176

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
           HNLNYW +GD+IGIG GAH ++     R+      + P+ +L     +       + L  
Sbjct: 177 HNLNYWAFGDFIGIGAGAHGKLSHPDGRIMRTWKTRLPKDYL---NPDKPFQAGSKLLPL 233

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQR 381
           ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + +   +RL  T +
Sbjct: 234 DELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLHQ-DPTRLIATPQ 292

Query: 382 GMTMLDSVIANLAV 395
           G   L+ ++    +
Sbjct: 293 GQLFLNDLLQYFLI 306


>gi|309379029|emb|CBX22331.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 470

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 157/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A  +      +  L +Y+H PFC   C YC  N    + K   + +I+    EM+ 
Sbjct: 48  EYLEALHSRGADASNKPLSLYIHIPFCNTICYYCGCNQIHTKDKGRADAYIEYLEKEMKL 107

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G R  ++ + FGGGTP+ +    +  + + I K + +  + E +IE +P  V   
Sbjct: 108 LSPHLGGRHQVAQLHFGGGTPTFLSDNQLERVFEMIRKYFQLIPDGEYSIEIDPRKVSRE 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 168 TVLKLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 228 PYQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPGSEEKLDMLQYC 286

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +    E        L   N+  Y      D + IG  +  ++ 
Sbjct: 287 VQTLTERGYVFIGMDHFAKPDDELSVALEKGLLQRNFQGYSTYADCDLVAIGVSSIGKIG 346

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    V+    L+ +      ++  L  R  +  + +E
Sbjct: 347 NTYSQN----ERDIDAYYAAIDEGRLPVMRGYQLNQDDILRRNIIQDLMCRFALDYRVYE 402

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++G   D            L   G +   +   L  T +G  ++ ++
Sbjct: 403 DISGTPFDRYFKDELADLEKLADLGLVSLNKQG-LTVTPKGRFLIRNI 449


>gi|282896778|ref|ZP_06304784.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Raphidiopsis brookii D9]
 gi|281198187|gb|EFA73077.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Raphidiopsis brookii D9]
          Length = 362

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 106/363 (29%), Positives = 190/363 (52%), Gaps = 14/363 (3%)

Query: 38  NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIA 97
           +            ++ +   E+      + P  + ++FFGGGTPSL+  + I  IL  + 
Sbjct: 6   HRVTGEASHTIGQYVDNICHEISITPTFSQP--LKTVFFGGGTPSLLSAKQIEQILSSLE 63

Query: 98  KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           + + +   +EI++E +P + ++ + QGY+ AGVNR+SLGVQ+   + L+  GR+H+  + 
Sbjct: 64  QRFAMEPKIEISMEIDPGTFDLAHIQGYKSAGVNRVSLGVQTFTPELLKTAGRSHSVEDI 123

Query: 158 IAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            AAI +   +  P  S DLI  LP Q++ QW+  L + +  A  H+S+Y LTIE GT+F 
Sbjct: 124 FAAIDIVNQVEIPEFSIDLISGLPHQSIEQWQNSLTKGVEIAPTHISIYDLTIETGTVFG 183

Query: 217 KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
           + ++ GD  LP++ + V +Y L Q I +  G   YEISN++  G +  HN  YW+   Y 
Sbjct: 184 RYYQAGDHPLPTDEITVKMYELGQEILTGAGYEHYEISNYAKPGHQCKHNRVYWQNLAYY 243

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G G GA S ++        S  +  + + + ++    A+++ E +  +++  E +M+G+R
Sbjct: 244 GFGMGATSYIEGKR----FSRPRRIQEYYQWLKNG--AIIDVEVIYVDEELLETIMLGMR 297

Query: 337 LREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSRLRCT-QRGMTMLDSVIAN 392
           L EG+++       G     + ++ LQ     G+++     RL  T  +G    + V+ +
Sbjct: 298 LAEGLNLGVLAEKFGHQRVEKIQKCLQPYVIPGWVKLTT-DRLCLTDPQGFLFSNVVLGD 356

Query: 393 LAV 395
           L  
Sbjct: 357 LFA 359


>gi|282856805|ref|ZP_06266064.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pyramidobacter piscolens W5455]
 gi|282585315|gb|EFB90624.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pyramidobacter piscolens W5455]
          Length = 376

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/378 (29%), Positives = 183/378 (48%), Gaps = 14/378 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +YVH PFC  KCPYC F S   R     E ++     E++ ++  L    S S+++ G
Sbjct: 7   LSLYVHAPFCRSKCPYCAFYSFAPRSGQ-MERWLACLAAELETIKSGLGEGESFSTVYIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS +       +L  + K        E T+EANP SV+      ++  GV R+S+GV
Sbjct: 66  GGTPSYLPLALWRKLLGALGK-VPREPACEFTVEANPESVDEEKLALWKDFGVTRVSVGV 124

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+ + R H++++A+  + L      R+S DLI+ LP+QT+ +W   + + ++ 
Sbjct: 125 QSLDDRELKTMARPHDSAQALRILELCMKKGFRVSADLIFGLPRQTLRRWHESMSKLVAE 184

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS+YQL IE G+ + +        LP       +Y   Q      GL  YEI++ +
Sbjct: 185 GVTHLSVYQLMIEDGSFWGR---CRPSGLPDG---YPMYRWAQYYLPRQGLKQYEIASFA 238

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN  YW+  D    GP A   +         S+ +    W + +      V  
Sbjct: 239 VPGFESRHNRAYWKRSDVYAAGPAAWGFLGGVRFANCRSLAR----WAERIENGQSPVEF 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV-QFSRL 376
           +E LS+ Q+A E  ++ LR  EGI  +++    G+       + L+     + V   + +
Sbjct: 295 REKLSAAQEASEAAILALRTSEGIHFEEFAARYGKRWLDAITKRLRALPEADFVWSGNGV 354

Query: 377 RCTQRGMTMLDSVIANLA 394
             + RGM + +S+   L 
Sbjct: 355 ALSPRGMRVGNSIWTELM 372


>gi|330444424|ref|YP_004377410.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pecorum E58]
 gi|328807534|gb|AEB41707.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlamydophila pecorum E58]
          Length = 373

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 120/382 (31%), Positives = 179/382 (46%), Gaps = 15/382 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G   L +Y+H PFC KKC YC F +   + +  +       L     +  L     I ++
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKSETVELYSQAIILEGEHKLAPLRDSHYIETV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P  +  IL  +A N       EIT+EANP ++        R   +NRIS
Sbjct: 63  FFGGGTPSLLSPSQLNNILSKLAPNAK-----EITLEANPENITKEYVDALRHTPINRIS 117

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+ ++  L+ LGR H++S AI A+ L  +  F  +S DL+Y LP QT+  +  +L R
Sbjct: 118 LGVQTFDDSQLQLLGRTHSSSHAIEALSLLTSWGFSNLSIDLMYGLPTQTLEGFLSDLNR 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL   + HLSLY LTI+  T FYK           E     + +L + + ++ GL  YEI
Sbjct: 178 ALKLPLTHLSLYNLTIDPHTSFYKHRNALAPTFAKEESLAAMSSLAEELCTSRGLLRYEI 237

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           ++++     S HNL YW    ++G+G  A   +    H V          +L+ V ++  
Sbjct: 238 ASYARTSYPSKHNLYYWTDRPFLGLGVSASQYL----HGVRSKNLSRISHYLRAVFRHLP 293

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
                E L  +++  E L + LRL EG   KD+       L    ++    Q  +     
Sbjct: 294 PEEFSETLPEKERLKEALALRLRLTEGALWKDFPQ----ELWNALKQCSSIQPLLTYSAH 349

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           S L    +G    DSV   +  
Sbjct: 350 S-LALNSQGRLFHDSVAEEIMA 370


>gi|224824737|ref|ZP_03697844.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
 gi|224603230|gb|EEG09406.1| oxygen-independent coproporphyrinogen III oxidase [Lutiella
           nitroferrum 2002]
          Length = 469

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 90/412 (21%), Positives = 162/412 (39%), Gaps = 26/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y    +    G  S  + +YVH PFC   C YC  N  + + K   + ++     E+  
Sbjct: 47  DYRHWLQQRKIGANSRPISLYVHLPFCNTVCYYCGCNKIITKDKSRADRYLDYLEKEVGL 106

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  + G R  +  + FGGGTP+ +  + +  ++  +   +   +  E +IE +P  V  +
Sbjct: 107 VADVLGQREKVIQLHFGGGTPTFLSDEQLERLMGILRTRFEFLAEGEYSIEIDPRKVTRD 166

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+GVQ  E +  + + R  +  E    I  AR   F  +S DLIY L
Sbjct: 167 TVLHLARLGFNRMSVGVQDFEPRVQQAVNRIQSEEETRVVIDAAREAGFRSVSVDLIYGL 226

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT       + + ++   D ++LY       T+F    +  +  LP   V +D+   +
Sbjct: 227 PLQTQESVAATVDKVIAMGPDRIALYNYAHLP-TVFMPQRRINEADLPLPPVKLDILQHS 285

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               SA G     + + +           +     N+  Y      D IG G  +  +V 
Sbjct: 286 VEQLSAAGYVFIGMDHFAKPDDDLTVALRQGRLQRNFQGYSTHADCDMIGFGVSSIGKVG 345

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     EK  ES+   + +N   V+    L  +      ++  L  R  +SV+  E
Sbjct: 346 PCYSQN----EKDLESYYAALDENRLPVLRGMVLDGDDILRRSIIQALMCRFALSVEAIE 401

Query: 348 MLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            + G N       ++   R  Q+QG +       L    +G  ++ ++    
Sbjct: 402 QVHGINFAEYFAAEMPAIREFQQQGLLT-FDGDFLMVEPKGRFLIRNIAMAF 452


>gi|94986421|ref|YP_605785.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Deinococcus geothermalis DSM 11300]
 gi|94556702|gb|ABF46616.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Deinococcus geothermalis DSM 11300]
          Length = 403

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 124/399 (31%), Positives = 195/399 (48%), Gaps = 23/399 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L AY   +    S    +YVH PFC   CPYCDF+   RR  +  E +++    E     
Sbjct: 18  LPAYPAPVPALDSTVRHLYVHVPFCPTICPYCDFHVLTRRAGL-VEKYLERVEEE-AAQL 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                  + +++ GGGTPS +    I  +   I ++      +E T+E NP +V      
Sbjct: 76  AAEYTVDLDTVYIGGGTPSFLRDAEITALAQSIRRHLGW-GRLENTLEINPGTVSAGRAA 134

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
            +R+ G +R S+GVQSL++ +LRFLGR H+A +A  A+        R+S DLI A+P Q 
Sbjct: 135 LWRELGFDRASVGVQSLDDATLRFLGRQHDARQAQEAVTTLVETGLRVSGDLITAVPGQP 194

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +     +++  +   V H+S Y LTIE GT F +     +     E+     +  T+ + 
Sbjct: 195 LA---EDIRGLVDLGVGHVSAYTLTIEPGTEFARRGVTVE-----EDDERAGFTQTEELL 246

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +A G   YE+SN++  G ES HNL YW    Y+G+GPGA     V   +   S+   P +
Sbjct: 247 TALGFTRYEVSNYARPGQESRHNLAYWHNRTYLGLGPGAAGHYPVA--QCQQSLPSSPLT 304

Query: 304 WLKMVRKNGHAVVEKE-----FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
            L+    + HA +  E      + +E+   + L MGLRLREG+++ D    +G N+    
Sbjct: 305 -LRRTNPHLHAWLTGEQGEMQLVDAEEYVTDALFMGLRLREGVNLADLTRRSGLNIRERY 363

Query: 359 ERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +    R+G +  ++  RLR T  G   L+ V+A+  
Sbjct: 364 ASAIAANVRRGLLV-LEGERLRATPPGWWTLNQVVADFL 401


>gi|317132587|ref|YP_004091901.1| oxygen-independent coproporphyrinogen III oxidase [Ethanoligenens
           harbinense YUAN-3]
 gi|315470566|gb|ADU27170.1| oxygen-independent coproporphyrinogen III oxidase [Ethanoligenens
           harbinense YUAN-3]
          Length = 368

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 119/384 (30%), Positives = 172/384 (44%), Gaps = 24/384 (6%)

Query: 16  SNSLGVYVHWPFC-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S SLG+YVH PFC   KCPYCDF S     +V  + +        +        R + S+
Sbjct: 2   SASLGLYVHVPFCAPAKCPYCDFYSVPFAPEVATQ-YADVLRAAARTYVPRLAGRRVESV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTP ++    +A +L    + + V+ + EIT+EANP S         R AG NR+S
Sbjct: 61  YFGGGTP-VLLGGTLAALLTYFKQIYPVAPDAEITVEANPGSDLAELLPVLRAAGFNRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QS  +  L  LGR H  ++   A+  AR   F  +S DL+ A P QT       +  
Sbjct: 120 LGMQSACDAELAALGRRHKTADVARAVEAARKAGFANLSLDLMLATPGQTPESIRRSVAF 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A +  V+H+S Y L +E GT F    +         ++  D Y        A G   YEI
Sbjct: 180 AAAQGVEHVSAYLLKVEPGTAFAMRGQQE----ADTDLQADCYLAACDALEARGYAQYEI 235

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G  S HNL YW  G+Y+G+GPGAH  +       A  +              G 
Sbjct: 236 SNFARPGFASRHNLRYWDCGEYLGLGPGAHGFLDGRRFHYARDLAAFLTGRPPEGDGPGG 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIER 370
              E            ++M+ LRL +G+         G N    D +    L+  GF+ R
Sbjct: 296 GFEE------------YVMLRLRLADGVEKNALRARCGANFSAFDAKTVERLENGGFLRR 343

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               R+  T++G  + ++VI  L 
Sbjct: 344 GA-GRIALTRQGFLVSNAVIGALL 366


>gi|33866180|ref|NP_897739.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 8102]
 gi|33639155|emb|CAE08161.1| possible oxygen independent coproporphyrinogen III oxidase
           [Synechococcus sp. WH 8102]
          Length = 407

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 116/396 (29%), Positives = 184/396 (46%), Gaps = 32/396 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ---------ENFIQSFLTEMQWMRQL 65
                  Y+H PFC ++C YCDF       +V           E++++    E+      
Sbjct: 4   PPPPRSAYLHIPFCHRRCYYCDFAVVPLGDRVDAREGPGSRSIEDYLRLLHREIASAAS- 62

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                +S+++ GGGTPSL+    IA +L  + + + +    EIT+E +P+S +       
Sbjct: 63  --GPPLSTVYIGGGTPSLLTADQIAELLAALRRQFGLQPGAEITLEMDPASFDQAQLVAV 120

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALP 180
             AGVNRISLG QS ++  L  LGR H  ++ + A                S DLI  LP
Sbjct: 121 LAAGVNRISLGGQSFDDAVLIDLGRRHRRADLLEACRWMHAAHQDGDLQSWSLDLIQNLP 180

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   W+ +L +A+     HLS+Y L++E GT+F +  +  +L LP E++AV L   T 
Sbjct: 181 GQTFEHWDDQLDQAIGSQAPHLSVYDLSVEPGTVFARRAERAELDLPEEDLAVRLMAHTS 240

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           +  +A GL  YEISNH+  G  S HN  YW    + G G GA S V+       ++  + 
Sbjct: 241 ARLAAAGLSRYEISNHARPGHASRHNRVYWSGAGWWGFGMGATSAVRGER----LARPRT 296

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            E++ + +                   DE L++GLR REG+ +       G+ L+ E  R
Sbjct: 297 REAYRRWLEAPPPLNAGSGM-----PLDELLLVGLRRREGVVL---TGRDGQALE-ERWR 347

Query: 361 NLQRQGFIERVQFSRLRC-TQRGMTMLDSVIANLAV 395
               QG +++    R +     GM + + V+  + +
Sbjct: 348 PFLEQGLLQKCS-GRWQLRDPEGMALSNRVLLEVVL 382


>gi|326512540|dbj|BAJ99625.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 475

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 181/416 (43%), Gaps = 46/416 (11%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV------------RRYKVGQENFIQSFLTEMQWMRQL-T 66
             YVH PFC K+C YCDF                        ++++  L E+   R +  
Sbjct: 54  SAYVHLPFCRKRCHYCDFPIVALGSSASSPGGSGSGEDPRIADYVRLLLREVAATRPVSD 113

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               + +IFFGGGTPSL+ P+ +A +LD +   + +S+  E++IE +P + +    +   
Sbjct: 114 DGVPLETIFFGGGTPSLVPPRLVAAVLDALRGRFGLSACPEVSIEMDPGTFDAAKLRELV 173

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA--RNIFPRMSFDLIYALPKQTM 184
             GVNR+SLGVQ+ +E+ LR  GR H   E   A+ +          S DLI +LP QT 
Sbjct: 174 GVGVNRVSLGVQAFQEELLRACGRAHGLREVHEAVGVVTGCEGLQNWSMDLISSLPNQTQ 233

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             WE  L+  +     H+S+Y L IE+GT F +++  G   LP+E  + + Y +     S
Sbjct: 234 EMWEESLRCTVDARPTHVSVYDLQIEQGTKFGQIYTPGVFPLPNETDSANFYKIASKRLS 293

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G   YEIS++   G E  HN+ YW+   +   G G+ S +          + K+   W
Sbjct: 294 EAGYQHYEISSYCKPGYECKHNVTYWQNRPFYAFGLGSASYINGVRFSRPRGM-KNYADW 352

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERN 361
           ++ + ++G    E     ++  A + +M+ LR   G+ +  +    G  L     +  R 
Sbjct: 353 VQKL-EDGTWCHESSVSETKDMAMDSVMLSLRTARGLDLHSFSKSFGEGLTRSLCDTFRP 411

Query: 362 LQRQGFIERVQFSR-------------------------LRCT-QRGMTMLDSVIA 391
               G +  +   R                         LR +   G  + + +I+
Sbjct: 412 FVESGLVIAMDKEREALHFNEFESDLESEGEMTGSRVAILRLSDPDGFLLSNELIS 467


>gi|148240097|ref|YP_001225484.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 7803]
 gi|147848636|emb|CAK24187.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. WH 7803]
          Length = 432

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 115/409 (28%), Positives = 181/409 (44%), Gaps = 37/409 (9%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQ 64
                   Y+H PFC ++C YCDF       +V   +         ++ S L E++    
Sbjct: 2   SAPAPRSAYLHIPFCHRRCFYCDFAVVPLGDRVQALDGPGSGSIALYLDSILQEIRL--- 58

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                 +++++ GGGTPSL+    +  +L  +   + +    E+T+E +P+S  +++   
Sbjct: 59  SPAGPPLATVYIGGGTPSLLTADQVGGLLAALTDRFGLQQGAEVTLEMDPASFALDDLSA 118

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYAL 179
             + GVNR+SLG QS ++  L  LGR H   + + A    +           S DLI  L
Sbjct: 119 LVRHGVNRVSLGGQSFDDGVLAALGRRHRRKDVLEACRWMQRFLQDGRLRSWSLDLIRNL 178

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q    W   L  A++    HLS+Y L+IE GT+F +  + G L LP E+ A D    T
Sbjct: 179 PDQDDAAWAATLSEAVALQAPHLSIYDLSIEPGTVFARREQQGTLRLPDEDGAADRIAFT 238

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN+S+ G  S HN  YW    +   G GA S    G       I +
Sbjct: 239 TQRLFEAGYCRYEISNYSWPGHASRHNRVYWSGAGWWAFGLGATS-APWGERFARPRIRE 297

Query: 300 HPESWLKMVRKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
               WL+  ++ G          + LS E +    L++GLR REG+ +    + +G +  
Sbjct: 298 AYALWLEQQQQEGPHTSLLRESAQPLSLEDR----LLVGLRRREGVDLLQQALASGWSAQ 353

Query: 356 ------IECERNLQ---RQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
                  E E+  Q    QG +E+ Q  R R T   GM + + ++  + 
Sbjct: 354 RCAVHLPELEQRWQVFLAQGLLEQ-QGRRWRLTDPLGMALSNQILVEVV 401


>gi|189485369|ref|YP_001956310.1| coproporphyrinogen dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287328|dbj|BAG13849.1| coproporphyrinogen dehydrogenase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 375

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 125/388 (32%), Positives = 210/388 (54%), Gaps = 31/388 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC +KC YC F S ++   V    ++ +    ++ + Q     +I SI+ GGGT
Sbjct: 4   LYIHIPFCKQKCLYCSFFS-IKYDNVLANRYVDAL---IEHVGQF-KNENILSIYVGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS++  + I  +L  ++    +S+  E T E NP SV        ++ GVNR+S+G+QS+
Sbjct: 59  PSVLSSEQIQKLLQALSDILNLSTIKEFTFELNPESVSKEKLHILKQLGVNRLSIGLQSV 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           E++SL+FLGR H+          AR   F  ++ DLIY LPKQT+  WE  L++ L +  
Sbjct: 119 EDKSLKFLGRLHSFKTFCYVYDTARKEGFTNINIDLIYGLPKQTLEDWEQVLKKTLLFNS 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLSLY  ++E+ T FYK     + ++ ++++  D+Y+ +  I + +G + YEISN S  
Sbjct: 179 EHLSLYPFSVEENTPFYK-----NGIITNDDIQRDIYDESMKILTNNGYNHYEISNWSKK 233

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE--SWLKMVRKNG----- 312
             ES HN NYWR  +YIG+G GA   +K   ++   +IEK+ E  S L++V+ +      
Sbjct: 234 ERESFHNTNYWRNLEYIGLGAGASGYLKRRRYKNIENIEKYIELCSSLQVVKGDCFRQYS 293

Query: 313 ---HAVVEKEFLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERN--LQRQG 366
                  E E++ S+    E +M+GLR L EGI++  +       + +EC +N  L R+G
Sbjct: 294 NLSFLETENEYIDSKLYKTETIMLGLRLLDEGINISCFNNPKHYYILLECLKNKMLNRKG 353

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
                   R++  +  + + + ++    
Sbjct: 354 -------GRIKLAKEYIFVFNQIVLKFM 374


>gi|59801909|ref|YP_208621.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA 1090]
 gi|239999647|ref|ZP_04719571.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|240014821|ref|ZP_04721734.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI18]
 gi|240017270|ref|ZP_04723810.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA6140]
 gi|240081091|ref|ZP_04725634.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|240121343|ref|ZP_04734305.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID24-1]
 gi|240124178|ref|ZP_04737134.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID332]
 gi|240126204|ref|ZP_04739090.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae SK-92-679]
 gi|254494362|ref|ZP_05107533.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae 1291]
 gi|260439833|ref|ZP_05793649.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|268595458|ref|ZP_06129625.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|268597204|ref|ZP_06131371.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268682802|ref|ZP_06149664.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID332]
 gi|268684787|ref|ZP_06151649.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-92-679]
 gi|291043107|ref|ZP_06568830.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|293398447|ref|ZP_06642625.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
 gi|59718804|gb|AAW90209.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Neisseria gonorrhoeae FA 1090]
 gi|226513402|gb|EEH62747.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae 1291]
 gi|268548847|gb|EEZ44265.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae 35/02]
 gi|268550992|gb|EEZ46011.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae FA19]
 gi|268623086|gb|EEZ55486.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID332]
 gi|268625071|gb|EEZ57471.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae SK-92-679]
 gi|291012713|gb|EFE04696.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae DGI2]
 gi|291610918|gb|EFF40015.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae F62]
 gi|317164903|gb|ADV08444.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 473

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+        G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|42525191|ref|NP_970571.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bdellovibrio bacteriovorus HD100]
 gi|39577402|emb|CAE81225.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bdellovibrio bacteriovorus HD100]
          Length = 390

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 101/390 (25%), Positives = 186/390 (47%), Gaps = 22/390 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + GVY+H P+C+++C YCDF ++ +   +  + +++    E++   +   P+S+ +I+FG
Sbjct: 2   AFGVYIHIPYCIQRCTYCDFATYEQSKILPPDQYVELLFKEIRQKHRYYTPQSLDTIYFG 61

Query: 78  GGTPSLIEPQNIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTPSLI    I  I+ +     +T   + EITIE NP++V     + Y   G+NR S+G
Sbjct: 62  GGTPSLIPANLIVAIIKELGRYGFTTRPDTEITIEINPATVSKEKLKTYLDNGINRFSVG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            Q+ +++ L+ + R H+A + +  + L R      SFD+++ALP QT+     +++ A+ 
Sbjct: 122 AQTFDDRLLKMVHREHSAKQTLETLDLLRAHGVNFSFDILFALPSQTVEGLRRDVEIAVE 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y LT+  G    K         P ++  V+++++     +  G   YE+SN 
Sbjct: 182 QGAKHISPYCLTVPDGHPLSK-------GRPIDDEQVEMFDIIADELTRKGFQQYEVSNF 234

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK------ 310
           +  G ES HN+ YW    Y  +G  +HS  K  +             + K +        
Sbjct: 235 ALPGFESRHNMLYWVDEPYWSLGLSSHSYSKESAWGTRYWNINSINEYQKQILAFDGQEF 294

Query: 311 ----NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQ 363
                     + E L   Q   +F    +RL  G++V+  +    +N+  +     +NL+
Sbjct: 295 DSPVRHLPSNQVEVLQMHQALTDFCHTSMRLMRGLNVEQLQAKFPQNVSEKVLQIMKNLE 354

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++ +I R        T+ G+ + + V   L
Sbjct: 355 QKSWI-RFDNGHWSLTREGLVLSNRVFQEL 383


>gi|237807216|ref|YP_002891656.1| coproporphyrinogen III oxidase [Tolumonas auensis DSM 9187]
 gi|237499477|gb|ACQ92070.1| oxygen-independent coproporphyrinogen III oxidase [Tolumonas
           auensis DSM 9187]
          Length = 457

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 173/408 (42%), Gaps = 29/408 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L A +          L +YVH PFC K C YC  N  V R +   E ++     E++ 
Sbjct: 40  QFLRAAQQ----YPQRPLSLYVHIPFCHKLCYYCACNKIVTRQRHKAEEYLGYLEKEIRQ 95

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +L   R+++ + +GGGTP+ +  + IA ++  +  N+  +   E +IE +P  + ++ 
Sbjct: 96  QAKLFAGRAVTQLHWGGGTPTYLSHEQIARLMTMLKTNFNFAEEGEFSIEIDPREITLDT 155

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
               ++AG NRISLGVQ  +++    + R  +     A I  A+   F   + DLIY LP
Sbjct: 156 LDVLKQAGFNRISLGVQDFDKRVQEVVNREQDNDFIRAMIRHAKELGFRSTNLDLIYGLP 215

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +   L++      D LS++       + F   HK  + +LPS    + +   T 
Sbjct: 216 LQTRESFRHTLEQIAELQPDRLSVFNYAHLP-SRFAGQHKIKEELLPSPAEKLAMLQETI 274

Query: 241 SITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
              ++ G     + + +    E        + + N+  Y      D +G+G  A S +  
Sbjct: 275 EYLTSQGYLYIGMDHFAKPDDELAQAQRAGVLHRNFQGYTTQGDCDLLGLGVSAISMLGD 334

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +     +K  + + + V + GHA  +   L  +      ++  L     +  K  E 
Sbjct: 335 AYSQN----QKELQVYYEQVTQLGHAQWKGCALQRDDLIRRDVIKQLICNFTLDPKQIEA 390

Query: 349 LAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + G +       D++  +     G +E V+   LR T  G  ++ ++ 
Sbjct: 391 IYGISFAEYFAEDLKLLQPFVNDGLVE-VEGQCLRVTATGRLLIRNIC 437


>gi|317494609|ref|ZP_07953022.1| oxygen-independent coproporphyrinogen III oxidase
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917539|gb|EFV38885.1| oxygen-independent coproporphyrinogen III oxidase
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 457

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 87/405 (21%), Positives = 167/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + + + +      +L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AEFAHAVARYPERALSLYVHIPFCHKLCYFCGCNKIVTRQTHKADEYLDKLALEISQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   R +S + +GGGTP+ ++   I+ ++  +   +    + EI+IE +P  +E++    
Sbjct: 99  MFAGRKVSQLHWGGGTPTYLDKTQISRLMRMLRDAFDFLPDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NR+S+GVQ   ++  + + R  +       I+ A+ I F   + DLIY LPKQT
Sbjct: 159 LRQEGFNRLSMGVQDFNKEVQKLVNREQDEQFIFDLINRAKAIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+      D LS++        LF    K  D  LPS +  + +   T ++ 
Sbjct: 219 PESFSYTLQKVAELNPDRLSVFNYAHMPK-LFAAQRKIKDEDLPSADSKLSILQETIAML 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TDSGYQFIGMDHFAHANDELAIAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + +   V+ +GHA+     ++ +      ++  L     +     E   G
Sbjct: 338 QNR----KVLKEYYADVQDHGHALWRGISMTEDDCLRRDVIKNLICNFRLDYSHVERQYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D++    L   G ++    +R+  T RG  ++ ++ 
Sbjct: 394 IVFADYFADDLKLLAPLVDDGLVDVTS-TRIEVTPRGRLLIRNIC 437


>gi|183597017|ref|ZP_02958510.1| hypothetical protein PROSTU_00249 [Providencia stuartii ATCC 25827]
 gi|188023673|gb|EDU61713.1| hypothetical protein PROSTU_00249 [Providencia stuartii ATCC 25827]
          Length = 457

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 175/405 (43%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA+           L +YVH PFC K C +C  N  V R K   + ++Q    E+     
Sbjct: 39  SAFVAATQRYPETPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLQVIEKEIIQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ + +GGGTP+ ++   ++ ++  +  ++  S +VE++IE +P  +E++    
Sbjct: 99  LLKGRTVTQMHWGGGTPTYLDKAQVSHLVTLLKTHFHFSDDVEMSIEVDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +     + R  +     A I+ A+   F   S DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKDVQVLVNREQDEDFIFALINRAKETGFTSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ +  + D LS++        LF    K  D  LPS    +D+   T +  
Sbjct: 219 PESFAFTLKKVIELSPDRLSVFNYAHLPN-LFAAQRKIKDEDLPSAEQKLDILQETIATL 277

Query: 244 SAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           ++ G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TSEGYQFIGMDHFAKPQDELAVAQREGILHRNFQGYTTQGDCDLLGLGVSAISMLGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   V + GHA+     L+++      ++  L     +     E L  
Sbjct: 338 QN----QKDLKTYYAQVEEQGHALWRGLVLTNDDCLRRDVIKTLICNFQLHYAQIEALYP 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D+   + ++  G +E  + + ++ T +G  ++ ++ 
Sbjct: 394 IEFKRYFAEDLALLKPMEEDGLVEITE-TAIKVTPQGRLLIRNIC 437


>gi|218961943|ref|YP_001741718.1| putative oxygen-independent coproporphyrinogen III oxidase
           (hemN-like) [Candidatus Cloacamonas acidaminovorans]
 gi|167730600|emb|CAO81512.1| putative oxygen-independent coproporphyrinogen III oxidase
           (hemN-like) [Candidatus Cloacamonas acidaminovorans]
          Length = 374

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 20/385 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            S+ LG+Y+H PFC+ +C YC F +   R  V  E ++     E          R +++I
Sbjct: 6   PSSPLGLYIHIPFCLSRCGYCSFFNVPYRNSVLNE-YVDYLEKEKSLYLNKL-NRPLATI 63

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPSL+  + I  IL G+     +    EIT+E NP  +     Q  +   +NR+S
Sbjct: 64  YFGGGTPSLLNAEQIRHILSGL----NMLPEAEITLEINPLQITPTYLQALKTTPINRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS+ ++ L FL R+H   +    I L R+  +  +S DLIY LP  T+   +  +++
Sbjct: 120 IGLQSMNQEELNFLERHHKPEQIQEKIALCRHFGYENLSLDLIYGLPYSTLQTLQRTVEK 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    +H+S Y LT++      K        LP+E +  + Y    +     G   YEI
Sbjct: 180 YLELKPEHISCYLLTLDADCKLAK----EKNNLPNEEIQAEQYAFLCNYLEKEGYIHYEI 235

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G  S HNL YW   DY+ +G  +   +    ++ +  +  + +S      + G 
Sbjct: 236 SNFALPGYTSQHNLRYWHNDDYLALGASSAGWISPIRYQNSADLNLYYQSI-----EKGE 290

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIER 370
              +KE LS ++   ++LMMGLRL+EGI + ++       L     E    LQ+ G +  
Sbjct: 291 TFPQKEELSQQRIIQDYLMMGLRLKEGIGLDEFYNRFQVKLTELYGERILKLQQIGMLNL 350

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
            + + L  T++ + + +SVI +L +
Sbjct: 351 TEHN-LELTEKALFVSNSVIGDLIL 374


>gi|37524249|ref|NP_927593.1| coproporphyrinogen III oxidase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783672|emb|CAE12525.1| oxygen-independent coproporphyrinogen III oxidase
           (coproporphyrinogenase) (coprogen oxidase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 457

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+           L +Y+H PFC K C +C  N  V R K   + ++Q    E++   +
Sbjct: 39  AAFIQAAARYPERPLSLYLHIPFCHKLCYFCGCNKLVTRRKHKADEYLQWLEREIRGRAK 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  +  ++    + EI+IE +P  +E++    
Sbjct: 99  LFSGRKVSQMHWGGGTPTYLNKNQISKLMGLLRHHFDFLPDAEISIEIDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +     A +  AR   F   S DLIY LPKQT
Sbjct: 159 LRSEGFNRLSMGVQDFNKEVQHLVNREQDEEFIFALVARARETGFNSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R L+ + D +S++       +LF    K  +  LPS    +D+   T +  
Sbjct: 219 PESFAFTLERVLALSPDRMSVFNYAHLP-SLFAAQRKIKEHDLPSAEQKLDILQETIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +++G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TSNGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQEECDLLGLGVSAISMLGDSYS 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   + K  HA+     LS +      ++  L     ++  D E    
Sbjct: 338 QN----QKELKTYYAELEKQEHALWRGLTLSQDDCIRRDVIKALICNFRLNFIDIEQQYE 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++    L   G +E  +   +  T RG  ++ ++ 
Sbjct: 394 LSFTRYFAEDLQLLTPLVDDGLVEVNEKQ-IWVTPRGRLLIRNIC 437


>gi|160944713|ref|ZP_02091940.1| hypothetical protein FAEPRAM212_02227 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443897|gb|EDP20901.1| hypothetical protein FAEPRAM212_02227 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104332|emb|CBL01876.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii SL3/3]
          Length = 360

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 185/381 (48%), Gaps = 26/381 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SLG+Y+H P+C  KC YCDF SH     V  + ++ + L E+         R   +++FG
Sbjct: 2   SLGLYLHIPYCFSKCRYCDFYSHPGERGVP-DAYVDALLRELHRFAPDAPLRP-DTLYFG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+ P     ++             EIT+EANP +V   + +G+R AGVNRIS GV
Sbjct: 60  GGTPSLLTPAQAERLIRAA----DPVPGAEITLEANPETVTEESLRGFRAAGVNRISFGV 115

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  LR LGR HNA +A AA   AR   F  +S D++ ALP  T  +++  L+    
Sbjct: 116 QSARDTQLRTLGRPHNAKQARAAFAAARRAGFENISGDIMLALPHYTQAEFDETLELIEK 175

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L IE  + F K   +G   LP+ + A D Y         HG   YEISN 
Sbjct: 176 GGATHISAYLLKIEPDSAFGKHPPEG---LPTSDEAADFYLYAVEQLEHHGYRQYEISNF 232

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW  GDY+G+GP AHS +       A       +     +        
Sbjct: 233 AKPGYEGKHNLIYWDCGDYLGLGPAAHSCMGGKRFCYAPDTAAFLQDAAAPIMDGSCG-- 290

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
                     A+++L++ LRLR+G+ ++ ++ L G+      +   +N  R G+      
Sbjct: 291 ----------AEDYLILQLRLRKGLDLEAYKTLYGKQFSTAQLAFVQNCVRAGY-ATFDG 339

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             L  T  G+ + +S++A L 
Sbjct: 340 RILALTPAGLIVQNSILAQLL 360


>gi|332709825|ref|ZP_08429782.1| coproporphyrinogen III oxidase, anaerobic [Lyngbya majuscula 3L]
 gi|332351423|gb|EGJ31006.1| coproporphyrinogen III oxidase, anaerobic [Lyngbya majuscula 3L]
          Length = 381

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 181/377 (48%), Gaps = 25/377 (6%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
              +      + +++    E+      T   S+ ++FFGGGTPSL+  + +A ILD + +
Sbjct: 5   KATQSTSSMIDQYVEVLCQEINITPPTTS--SLDTVFFGGGTPSLLTVEQLAKILDTLDR 62

Query: 99  NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
            + ++++ EI++E +P +   +   GYR  GVNR+SLGVQ+ +++ L   GR H++ + +
Sbjct: 63  RFGIAADAEISMEMDPGTFNKDQLTGYRDLGVNRVSLGVQAFQDKLLSNCGRTHDSKDIV 122

Query: 159 AAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            AI L   +  P  S DLI  LP QT+ QW+  L+  +  A  H+S Y L +E  T F +
Sbjct: 123 TAIELIHQVEVPEFSLDLISGLPAQTLEQWQESLEITVKIAPTHISSYDLVLEPVTAFGR 182

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
            +  G   LP++   V +Y L Q + ++ G   YEISN++  G +  HN  YW    Y G
Sbjct: 183 QYTSGTKPLPTDETTVMMYRLAQQVFTSVGYEHYEISNYALPGHQCRHNRVYWENRPYYG 242

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
            G GA S    G         +  ++W++ + + G  V +    +SE    E LM+GLRL
Sbjct: 243 FGMGAASY-TQGYRFTRPRTRREYDAWVEQLLEAG-GVWDGSPTTSEDVLLETLMLGLRL 300

Query: 338 REGISVKDWEMLAGRNLDIECERNLQRQG---FIERVQF----------------SRLRC 378
            EG+S+       G  +  +    L       ++E V                    LR 
Sbjct: 301 AEGLSLSMLAQRFGEKILEQIWMGLLPYYGCNWVEVVGDNGERVNLTYGQRLPVAGGLRL 360

Query: 379 T-QRGMTMLDSVIANLA 394
           T   G    ++++A+L 
Sbjct: 361 TDPEGFLFSNTILADLF 377


>gi|162447538|ref|YP_001620670.1| oxygen-independent coproporphyrinogen III oxidase [Acholeplasma
           laidlawii PG-8A]
 gi|161985645|gb|ABX81294.1| oxygen-independent coproporphyrinogen III oxidase [Acholeplasma
           laidlawii PG-8A]
          Length = 363

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 20/374 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC   C YCDF   V + +   + ++     E+          SI +IF GGG
Sbjct: 3   GLYIHIPFCEYICHYCDFVKRVPKNQNMIDQYLIKLREEIMTYESHFD--SIETIFVGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++    +  + D + +   V    E +IE NP S        ++K G+NRIS+GVQS
Sbjct: 61  TPSMLTVDQLTYLFDSLVRIKPV----EFSIELNPESYTHEKGLVFKKYGINRISMGVQS 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L +L R H   +  + I   +++    +S DLI+A+P QT+   + +L++ L   
Sbjct: 117 FDDKILAYLNRGHKTEQVFSIIKDLKDLGIPYISIDLIFAIPGQTLDHIKYDLEQFLKLD 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY  +  G+     E+    +Y    +  + HG   YEISN++ 
Sbjct: 177 ITHISYYSLILEDKTYFYHQYLKGNFKPMDEDNEAIMYEYVMNFLTNHGYDQYEISNYAK 236

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               SLHN  YW  G+YIG+G GAH  +          + ++ + +LK          EK
Sbjct: 237 NNHYSLHNNIYWTLGEYIGVGLGAHGFIDNYRTYNERGMGQYMDHFLK----------EK 286

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSRL 376
              + + +  + L+ GLRL +G+ +   E      L  +     +  + G +E ++   +
Sbjct: 287 TLQTEDLKLQDELIFGLRLTKGVYIPRLEQKYKIKLTEKYPQIHDKIKLGLLE-IKDDYI 345

Query: 377 RCTQRGMTMLDSVI 390
           R T+ G  + + V 
Sbjct: 346 RLTKEGTMLGNQVF 359


>gi|169350126|ref|ZP_02867064.1| hypothetical protein CLOSPI_00868 [Clostridium spiroforme DSM 1552]
 gi|169293339|gb|EDS75472.1| hypothetical protein CLOSPI_00868 [Clostridium spiroforme DSM 1552]
          Length = 363

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 22/378 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC+  C YCDF   V   K   +++++    E+     L     + +I+ GGG
Sbjct: 5   SLYIHIPFCLHICAYCDFCK-VFYNKELVDDYLEVLKRELN---DLNLNIPLKTIYIGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + +  ++D I     ++++ E+TIE NP +++       +K GV R+S+GV++
Sbjct: 61  TPTSLNDEQLKSLMDMIRPY--INNDCEVTIETNPETLDYYKLDILKKGGVTRLSIGVET 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ + R H +      I   + + F  +S DL+Y LP QT+   + +L    S  
Sbjct: 119 FNDNILKKINRKHTSDMVKRIIRYGQQLEFDNISIDLMYGLPDQTLQDIKNDLNIIESLN 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T+    +         E+    +  +      + G   YEISN+S 
Sbjct: 179 IQHVSYYSLILEDHTVLKNQNYQSL----DEDSEALINQIIDEKLESLGFMKYEISNYSK 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ESLHNL YW+Y +Y GIG GA S++        I   ++  ++L     N      K
Sbjct: 235 KGFESLHNLTYWQYDNYYGIGLGASSKIDNC----IIEHSRNLNAYL-----NYRDTTSK 285

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER--VQFSRL 376
              S E+     LMM LRL +G+ +K+++    +++    +  L +   ++   ++   L
Sbjct: 286 IECSKEEIMFNHLMMSLRLVKGLDLKEFKERYNKDIYDVYQVALDKHLKLKTLVIEDGYL 345

Query: 377 RCTQRGMTMLDSVIANLA 394
           RC +  + +L+ ++ +  
Sbjct: 346 RCNKESIKLLNMILLDFM 363


>gi|255071289|ref|XP_002507726.1| predicted protein [Micromonas sp. RCC299]
 gi|226523001|gb|ACO68984.1| predicted protein [Micromonas sp. RCC299]
          Length = 435

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 104/425 (24%), Positives = 183/425 (43%), Gaps = 52/425 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFN---------SHVRRYKVGQENFIQSFLTEMQWMR------- 63
             Y+H PFC ++C YCDF          SH+     G   ++   + E+           
Sbjct: 6   SAYLHLPFCRRRCHYCDFAISLVGDDAESHIA--LQGMRRYVDFLIREIALTPYSSSTCD 63

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            +      + ++FFGGGTPSL+ P  +  +++ + + + +  + EI++E +P + +    
Sbjct: 64  FEGGDQPPLRTVFFGGGTPSLLPPDLLGSVIEALRERFGIDPDAEISMEMDPGTFDAEKL 123

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALP 180
             Y   GVNR+SLG+QS +   L++ GR H   E+  A+    A     R S DLI  +P
Sbjct: 124 TQYVDLGVNRVSLGLQSFDANVLKWAGRGHTLEESREALAAVRANRGVERWSLDLISGMP 183

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK-------------------- 220
             T   W   L+ A+  A  H+S+Y L +E+GTLF   +                     
Sbjct: 184 GLTKEAWSDSLKEAIDVAPHHISVYDLQVEEGTLFGSWYNASRIGENGTNKTMVSNLNSR 243

Query: 221 DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIG 279
                LPSE+ + +++++        G   YE+S+++ +G+   HN  YW     + G G
Sbjct: 244 MARPELPSEDESAEMFHMASETLRGAGYEHYEVSSYAKVGSRCAHNQVYWTGRQGWYGFG 303

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGHAVVEKEFLSSEQQADEFLMMG 334
             A S    G         +  E++++ +       +    ++  F +  +   E LM+G
Sbjct: 304 MSATSFTAHGKQFARPRKMRDYEAYVEAMAAFIDEPSRARTIKSSFEARAEALLERLMLG 363

Query: 335 LRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQFSRLRCTQR-GMTMLDSVI 390
           LR R G+ +       G  +  E   +  R G+   +  +   RL  +   GM +   +I
Sbjct: 364 LRTRNGVDLVHLRQDFGDAVLAEIV-SAVRAGWPEELVEMDDYRLTLSDPGGMLVSTQLI 422

Query: 391 ANLAV 395
           + L V
Sbjct: 423 STLMV 427


>gi|229815225|ref|ZP_04445561.1| hypothetical protein COLINT_02271 [Collinsella intestinalis DSM
           13280]
 gi|229809235|gb|EEP45001.1| hypothetical protein COLINT_02271 [Collinsella intestinalis DSM
           13280]
          Length = 424

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 95/397 (23%), Positives = 171/397 (43%), Gaps = 31/397 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISS 73
               +Y+H PFC  KC YCDF+S            + +  +  +++           + +
Sbjct: 28  KPRALYLHIPFCKAKCLYCDFDSRALGGCELDAAMDRYCIALTSQIDTYGAAGELDEVET 87

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTPS+        ++  + +        E T EANP S  +   Q  R+AGV RI
Sbjct: 88  VYIGGGTPSIFGA----RLVSLVERVRGYCDPTEFTCEANPESFTLELAQALREAGVTRI 143

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQ+L+   L+ +GR H+A +A+ AI  A+ I    S D++  LP QT+  +   L+ 
Sbjct: 144 SLGVQTLDAGELKAIGRIHSAEQAMLAIAQAKAIGFSTSCDVMCGLPGQTLESFGRTLET 203

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++   DH+S+Y L +E+GT   ++ + G + +P E+      +L     +  G   YE+
Sbjct: 204 LMTLRPDHISVYPLQLEEGTPLARLEEQGRIAVPDEDFQAACMDLAAGKLAGAGFERYEV 263

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP------------ 301
           ++++  G    HN+ YW    Y+G+G  A     +       ++  +P            
Sbjct: 264 ASYAQPGQRCRHNIAYWTGKPYLGLGRSAAGMFDIPVTSEMCNLGTYPFYTSGANPSSAP 323

Query: 302 ----ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM----LAGRN 353
                 + ++  +      + E L+  +   E LM+  R+ +GI +         +   +
Sbjct: 324 QEGRVRYRQLDNEGTQ--FDTEHLTPREAMAEDLMLACRMTDGIPLDLLARAASCIPEAD 381

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           L   CE  +     +       LR T  G    + + 
Sbjct: 382 LRAACETAISS--GLATWDEDALRPTHLGWLDGNELF 416


>gi|187930548|ref|YP_001901035.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12J]
 gi|187727438|gb|ACD28603.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12J]
          Length = 494

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 28/406 (6%)

Query: 2   KYLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            YL A         +    L +Y+H PFC   C YC  N  + +       ++++   EM
Sbjct: 57  DYLDALHRRAAIAPALHAPLSLYMHLPFCANLCYYCGCNKVITKDHSRSARYVETLAREM 116

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             +    GP R ++ + +GGGTP+ +    +  ++    +++ V+++ EI++E +P   +
Sbjct: 117 AMVANQIGPLRRVTQLHWGGGTPTFLAHDEMRAVMAATREHFDVANDGEISVELDPRHAD 176

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +   + G NR SLG+Q  +    R + R  +  E    +  AR   F  +SFDLIY
Sbjct: 177 DATLEVLAEIGFNRASLGIQDFDPDVQRAVHRIQSVEETRRVVDTARRLGFESISFDLIY 236

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q    +   L R L  A D LS+Y        LF    +   L LP+ +  +DL  
Sbjct: 237 GLPYQRTETFNATLDRVLEMAPDRLSVYSYAHLPH-LFKAQRRIDMLTLPTADEKLDLLA 295

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
           +T     A G     + + +           E     N+  Y      D +  G  A SR
Sbjct: 296 MTVERLVAEGYVYIGMDHFARPDDALAVAQREGRLQRNFQGYSTHADCDMLAFGVSAISR 355

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V      V    EK  +++   +     AV+    L+ +      L+  L     ++++ 
Sbjct: 356 VGD----VYAQNEKDLDAYYARIDAGELAVLRGMSLTPDDHVRRALIGELMCGFELNMRA 411

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +    G +       +++    L+  G + +V   R+  T +G  +
Sbjct: 412 FGARHGLDFKRSFADELQALAPLEEAGLV-KVGDERIVITPQGRLL 456


>gi|290473291|ref|YP_003466157.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Xenorhabdus bovienii SS-2004]
 gi|289172590|emb|CBJ79359.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Xenorhabdus bovienii SS-2004]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 171/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+           L +Y+H PFC K C +C  N  V R K   ++++     E+    +
Sbjct: 39  TAFAQAAARYPDRPLSLYIHIPFCHKLCYFCGCNKLVTRQKHKADDYLNILEKEITARAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ ++   I+ ++  +  ++      E++IE +P  +E++    
Sbjct: 99  LFSQRKVSQMHWGGGTPTYLDKTQISRLMSVLRSHFDFLPESELSIEIDPREIELDVIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R  +       ++ AR   F   S DLIY LPKQT
Sbjct: 159 LRHEGFNRLSMGVQDFNKEVQHLVNREQDEDFIFELVNRARETGFISTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR L+ + D LS++        LF    K  +  LPS    +D+   T +  
Sbjct: 219 SESFAFTLQRVLALSPDRLSVFNYAHLPD-LFAAQRKIKEHDLPSAEQKLDILQGTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           + +G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGNGYQFIGMDHFARPDDELAIAQREGVLHRNFQGYTTQGECDLLGMGVSAISMLGDSYS 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V + GHA+     L+ +      ++  L     ++  D E   G
Sbjct: 338 QN----QKDLKIYYAAVEEQGHALWRGLVLTQDDCIRRDVIKDLICNFRLTFADIEQRYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D++    L   G ++  +   ++   +G  ++ +V 
Sbjct: 394 LNFANYFAEDLQLLAPLVEDGLVDITEKQ-IQVLPKGRLLIRNVC 437


>gi|194476566|ref|YP_002048745.1| Oxygen-independent coproporphyrinogen III oxidase [Paulinella
           chromatophora]
 gi|171191573|gb|ACB42535.1| Oxygen-independent coproporphyrinogen III oxidase [Paulinella
           chromatophora]
          Length = 424

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/392 (29%), Positives = 195/392 (49%), Gaps = 21/392 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQW-MRQLTGPRSISSI 74
               Y+H PFC ++C YCDF       K      N IQ +L  +   +        +S++
Sbjct: 19  PRSAYLHIPFCHRRCYYCDFAVIPLGDKADGAHSNSIQGYLELLHHEISSSIKGPPLSTV 78

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS++  + +  +L+ +  ++  +   E+T+E +PS+     F+GY  AG+NR+S
Sbjct: 79  YIGGGTPSMLTSKQLEQLLEALRCHFGFAPEAELTLEMDPSTFNRRRFEGYLAAGINRMS 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQTMTQWEM 189
           LGVQS E+ +L  LGR H   +   ++      F        + DLI  LP QT+ QW+ 
Sbjct: 139 LGVQSFEDITLTNLGRRHRWRQLQESLSWLAAAFEENGLISWNLDLIQGLPSQTLLQWKS 198

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L++A+++   HLS+Y L+IE GT+F   +  G L LP  +   DL  L+ +  SA G  
Sbjct: 199 QLEKAINFNPPHLSIYTLSIEPGTVFAWQYSQGKLALPESDETADLMELSYNFLSAVGYS 258

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G  S HN  YW    + G G GA S      +   I+  +  E++ + + 
Sbjct: 259 QYEISNFALPGHASRHNRAYWSGAGWWGFGLGATS----APYGEIIARPRKRETYTRWLI 314

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-----LDIECERNLQR 364
            +    +E     S    DE +++G+R REG+++     ++G +     L +   +    
Sbjct: 315 ADKLKRLEIPI--SGMSFDERIIVGMRRREGVALAMQAYISGVSEQALKLLLIRWKQFYD 372

Query: 365 QGFIERVQFSRLRCTQ-RGMTMLDSVIANLAV 395
            G I  ++  R R ++  GM M + V+  + V
Sbjct: 373 SGLI-LIEGERWRLSEPYGMAMSNGVLREMLV 403


>gi|260642797|ref|ZP_05417345.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides finegoldii DSM 17565]
 gi|260620486|gb|EEX43357.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides finegoldii DSM 17565]
          Length = 335

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 176/338 (52%), Gaps = 10/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++      I +I+FGGGTPS +E ++   I D I +++ ++   EIT+EANP  +   
Sbjct: 1   MRKEYLKGEDIETIYFGGGTPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQE 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +       NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY L
Sbjct: 61  YLEMLSSLPFNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKAGFQNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L 
Sbjct: 121 PEETKERWENDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN    G  S HN +YW+   Y+G GP AHS   +       SI  
Sbjct: 181 IEHLQKAGFEHYEISNFCRPGKYSRHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI-- 238

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             ++++K + ++  A  E E+L    + +EF++  +R   G  ++  + + G  +   C+
Sbjct: 239 --DTYIKGIEEDCRA-FETEYLDPTTRYNEFIITTIRTVWGTPIEKLKQMFGNEMWEYCQ 295

Query: 360 RNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +      + G +E      LR T+ G+ + DS++++L 
Sbjct: 296 KMAAPYLKNGKLEEY-NGALRLTREGIFISDSIMSDLL 332


>gi|206577088|ref|YP_002241254.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae 342]
 gi|206566146|gb|ACI07922.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           pneumoniae 342]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 170/407 (41%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  AEFDAAVARYPQRPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIRRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R +  + +GGGTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++    
Sbjct: 99  QFASRQVKQLHWGGGTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +     +H AR I F   + DLIY LPKQT
Sbjct: 159 LRTEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+      D LS++       TLF    K  D  LP+    +++   T    
Sbjct: 219 PESFAFTLQKVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPTAEQKLEILQETIGSL 277

Query: 244 SAHGLHAYEISNHSFLGAE----SLH---NLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +A G     + + +    E      H   + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFARPDDELAVAQRHGILHRNFQGYTTQGDTDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK------- 344
           +     +K  + + + V + G A+     L+ +      ++  L     + ++       
Sbjct: 338 QN----QKELKLYYQQVAEQGDALWRGIALTRDDCLRRDVIKALICNFRLDIEAVEAQWD 393

Query: 345 -DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            D++     +L  +    L   G +  V    ++ T +G  ++ ++ 
Sbjct: 394 VDFQSYFAEDL--KLLAPLAHDGLVA-VDDKAIQVTAKGRLLIRNIC 437


>gi|32034965|ref|ZP_00135049.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|126208437|ref|YP_001053662.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           L20]
 gi|307254842|ref|ZP_07536668.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259284|ref|ZP_07541013.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|126097229|gb|ABN74057.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306862213|gb|EFM94181.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866651|gb|EFM98510.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 455

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 167/404 (41%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 38  DFKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ I +GGGTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     
Sbjct: 98  FTNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ +
Sbjct: 158 KSIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R +    D +S++       + F    K  D +LP+    + +   T     
Sbjct: 218 ESFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLG 276

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +           + + + N+  Y      D +G+G  A S +     +
Sbjct: 277 GNGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  + +   V + G A+ +   L+ +      ++  L     +     +     
Sbjct: 337 NH----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 393 DFKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGRLLIRNIC 435


>gi|303251100|ref|ZP_07337286.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252598|ref|ZP_07534492.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650110|gb|EFL80280.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859920|gb|EFM91939.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 455

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 167/404 (41%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 38  DFKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ I +GGGTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     
Sbjct: 98  FTNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ +
Sbjct: 158 KSIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKALGFTSTNIDLIYGLPKQNV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R +    D +S++       + F    K  D +LP+    + +   T     
Sbjct: 218 ESFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLG 276

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +           + + + N+  Y      D +G+G  A S +     +
Sbjct: 277 GNGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  + +   V + G A+ +   L+ +      ++  L     +     +     
Sbjct: 337 NH----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 393 DFKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGRLLIRNIC 435


>gi|294634248|ref|ZP_06712791.1| oxygen-independent coproporphyrinogen III oxidase [Edwardsiella
           tarda ATCC 23685]
 gi|291092335|gb|EFE24896.1| oxygen-independent coproporphyrinogen III oxidase [Edwardsiella
           tarda ATCC 23685]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 167/406 (41%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A++  +      +L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFQRAVVRYPERALSLYVHIPFCHKLCYFCGCNKIVTRQTHKADEYLDKLALEIAARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +    I+ ++  +  ++  +   EI+IE +P  +E++    
Sbjct: 99  LFAGRTVSQLHWGGGTPTYLNKAQISRLMALLRTHFHFAPQAEISIEIDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   + + R  + +   A +  AR I F   + DLIY LP+QT
Sbjct: 159 LRHEGFNRLSMGVQDFNKTVQQLVNREQDEAFIFALLRHAREIGFTSTNIDLIYGLPRQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ +    D LS++        LF    K  D  LPS +  + +   + +  
Sbjct: 219 PESFAFTLQKVIELNPDRLSIFNYAHMPK-LFAAQRKIKDADLPSADHKLAILQQSIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TGVGYQFIGMDHFAHRDDELAVAQRAGKLHR-NFQGYTTQGDSDLLGLGVSAISMIGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   V   G A+     +S +      ++ GL     +     E   
Sbjct: 337 SQNL----KVLKEYYAAVEAQGTALWRGLTMSQDDCIRRDVIKGLICNFRLDYAPIEQHY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D+   R L + G +E +    +  T RG  ++ ++ 
Sbjct: 393 GIRFVDYFVEDLVLLRPLAQDGLVE-LGADAITVTPRGRLLIRNIC 437


>gi|302877517|ref|YP_003846081.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
 gi|302580306|gb|ADL54317.1| oxygen-independent coproporphyrinogen III oxidase [Gallionella
           capsiferriformans ES-2]
          Length = 473

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 166/395 (42%), Gaps = 26/395 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
           S  L +Y+H PFC   C YC  N  + + +     +++  + EM     L G  + +  +
Sbjct: 65  SRPLSLYIHIPFCNTLCFYCACNKVITKDRSKSAEYVRYLIKEMGMQANLLGKGQVVEQL 124

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+ +    I  ++  I +N+ +  + E +IE +P  V         +AG NRIS
Sbjct: 125 HFGGGTPTFLSDDEIRQVMAAIRENFKLVEDGEYSIEIDPRKVTNETIALLGEAGFNRIS 184

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  ++   R + R  +  E +  I  AR N F  +S DLIY LPKQT+  +   L R
Sbjct: 185 IGVQDFDDDVQRAVNRIQSEEETLGIIAAARANGFKSVSIDLIYGLPKQTLEGFGRTLDR 244

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++   D LS+Y       TLF    +  +  LPS  + +D+  +T    +  G     +
Sbjct: 245 IIAANPDRLSIYNYAHMP-TLFKPQRRIHEEDLPSPQMKLDILGMTGRKLTGAGYVYIGM 303

Query: 254 SNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           +S  + N+  Y      D + +G  A  ++     +      +  
Sbjct: 304 DHFAKPEDELAVAQRQSRLHRNFQGYSTHSDCDLVALGVSAIGKIGPTYSQNY----REL 359

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           E +   + ++   ++    L+++      ++  L     +S +   +    + D      
Sbjct: 360 EDYYDALDRDQLPIMRGMELNADDLVRRAIIQDLMCHFELSKESLNIAYLIDFDSYFATE 419

Query: 362 LQR------QGFIERVQFSRLRCTQRGMTMLDSVI 390
           L+       +G +E +    +  T +G  ++ ++ 
Sbjct: 420 LEELREYEMEGLLE-ISPQWISVTPKGRMLIRNIC 453


>gi|289450717|ref|YP_003475093.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185264|gb|ADC91689.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 421

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 45/418 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----WMRQLTGPRSI- 71
               Y+H PFC +KC YCDFNS+  + K   E ++ + + E++      +R       + 
Sbjct: 8   PRAAYIHIPFCERKCGYCDFNSYAGKEK-YIEPYVDALVNEIRFNFRKMLRAFGSSIPLS 66

Query: 72  ----------------SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                            +++FGGGTPSL+  Q I  I+D +   + ++ N EIT+EANPS
Sbjct: 67  ELNFGSEGFSSFDMALRTVYFGGGTPSLLSAQQIGEIIDVLRHTFGLTPNCEITLEANPS 126

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMS 172
           S    ++   ++ G+NR+S+G+QS  ++ L  LGR H         AA+  A      +S
Sbjct: 127 SASALDWSEVKRFGINRVSVGLQSYNDRLLNVLGRIHTCRDFDCTTAALQRA--GLENIS 184

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV------- 225
            DL+  LP Q++    M L+  +     H+S+Y L IE GT F  ++             
Sbjct: 185 CDLMIGLPTQSLADIHMSLEHVIKSGYRHISVYSLIIEPGTPFASLYGMDAPDSKSKLAT 244

Query: 226 ------LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
                 LP E       +        HG   YE+SN++  G+ S HN+ YW    Y G G
Sbjct: 245 SVALAVLPDETTERQQQHFVSDYLKDHGFSRYEVSNYAQEGSRSKHNIVYWDGLGYYGFG 304

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
            GAH  V        I+  K+  ++             +E +S      EF ++GLR  +
Sbjct: 305 AGAHRFVGGIRSGSEINPLKYISNFSDSKVPTKLDYPIEEIISRRAAMSEFFVLGLRKTD 364

Query: 340 GISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G+S +++    G ++ +        L+ +G +   +    R +  G+ + + V     
Sbjct: 365 GVSRQEFVQRFGCDIPLNLRVKLDELRGKGLL-IAEAGGWRLSDFGLDVANIVWEEFL 421


>gi|167755872|ref|ZP_02427999.1| hypothetical protein CLORAM_01389 [Clostridium ramosum DSM 1402]
 gi|167704811|gb|EDS19390.1| hypothetical protein CLORAM_01389 [Clostridium ramosum DSM 1402]
          Length = 364

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 25/380 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF   V   +   ++++     E+Q    L     + +I+ GGG
Sbjct: 5   SLYLHIPFCEQICAYCDFCK-VFYNEHQADDYLAVLKHELQ---ALNITEPLKTIYIGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  ++D I    + S   E++IE NP S++       ++ GV+R+S+GV++
Sbjct: 61  TPSSLNDEQLEWLMDIIKPYIS-SETKEVSIEVNPESIDYYKLDILKRGGVSRLSIGVET 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L+ + R H   +    I  AR I F  +S DL+Y LP QT+T  + +L +     
Sbjct: 120 FNDILLKKINRQHTTIQVERIIDYARKIGFNNISIDLMYGLPNQTITDIKNDLAKVRQLP 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L +E  T+   +    +     E V   +  L +      G H YEISN + 
Sbjct: 180 IEHISYYSLILEDHTVLKNL----NYQPLDEEVESKITQLIEESLEQIGFHKYEISNFAK 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ESLHNL YW+Y +Y GIG GA  ++        I   ++  ++L+         + K
Sbjct: 236 TGYESLHNLAYWQYDNYYGIGVGASGKIDDCL----IEHNRNLNAYLRRQN-----TITK 286

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----DIECERNLQRQGFIERVQFS 374
              S E+     LMM LRL +G+ +K++E   G           +++L+ +  +  ++  
Sbjct: 287 MINSKEETMFNHLMMSLRLVKGLDLKEFEKRYGLRAVDVYQTAIDKHLKMKTLV--IEND 344

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L  T   + +L+ ++ +  
Sbjct: 345 YLHATSESIKLLNEILIDFL 364


>gi|221194555|ref|ZP_03567612.1| coproporphyrinogen III oxidase [Atopobium rimae ATCC 49626]
 gi|221185459|gb|EEE17849.1| coproporphyrinogen III oxidase [Atopobium rimae ATCC 49626]
          Length = 426

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/395 (26%), Positives = 169/395 (42%), Gaps = 25/395 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +YVH PFC  KC YCDF S            +  +  +++Q    L       S + GG
Sbjct: 32  ALYVHIPFCAHKCVYCDFASWATASSDPLMARYEAAIESQIQEAYALGLLEDCQSAYVGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L+  + +  ++  I     ++   E + EANP S+        + AG  RISLGVQ
Sbjct: 92  GTPTLLGAE-LGRLVSCIRAKAPIA---EFSCEANPDSLTDEVLLVLKDAGTTRISLGVQ 147

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  +  L +LGR H+A +A      A ++   +S D++ AL  QT   W+  L   L   
Sbjct: 148 SFCDAELLWLGRIHSAKQAFDRARAAASMGFDVSCDVMCALKGQTQKSWQQTLATFLELD 207

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDH+S+Y L+IE+GT   K            +V        + I  A G   YE+++++ 
Sbjct: 208 VDHVSVYPLSIEEGTPLAKQTAGAKTPWNGPDVQAGRMEEAEKILKAAGYARYEVASYAR 267

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR----VAISIEKHPESWLKM------- 307
                 HNL+YW    YIG+G GA S +    +     +  S+ + P+   +        
Sbjct: 268 NHKVCRHNLSYWTAQPYIGLGTGAASMLTREGYDKLCTIQTSLPQPPKDAFRARLKVCDA 327

Query: 308 ---VRKNGHAV---VEKEFLSSEQQADEFLMMGLRLREGISVKDW---EMLAGRNLDIEC 358
              +           + EFL   + A E LM+G RL +G+S       + + G+      
Sbjct: 328 RQSIAAGKTLADTSFDVEFLDVCEAAAEDLMLGARLTQGLSPSLVAYAQEVLGKERVEGT 387

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +    G + R     L  T+ G  + + +   L
Sbjct: 388 LESCVHDGLLARTAAGALVPTESGWLLGNELYGRL 422


>gi|240116348|ref|ZP_04730410.1| coproporphyrinogen III oxidase [Neisseria gonorrhoeae PID18]
 gi|268602014|ref|ZP_06136181.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID18]
 gi|268586145|gb|EEZ50821.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           gonorrhoeae PID18]
          Length = 473

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 82/407 (20%), Positives = 159/407 (39%), Gaps = 24/407 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+        G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ 
Sbjct: 51  EYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKRRADTYIEYLEKEMEL 110

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +  + I  +   I K++ +  + E +IE +P  V  +
Sbjct: 111 LAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSIEIDPRKVSRD 170

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                 + G NR+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY L
Sbjct: 171 TVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAGFKSVSVDLIYGL 230

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  +   LS   D L+LY        +F    +     +P     +D+    
Sbjct: 231 PHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQRRIDTAAVPDSEEKLDMLQYC 289

Query: 240 QSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVK 287
               +  G     + + +    E            +   Y  Y D   + IG  +  ++ 
Sbjct: 290 VQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIG 349

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E+  +++   + +    ++    L+ +      ++  L  R  +  + +E
Sbjct: 350 STYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQDLMCRFALDYRIYE 405

Query: 348 MLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRGMTMLDSV 389
            + G   D   +  L       G  + R+    L  T +G  ++ ++
Sbjct: 406 SMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIRNI 452


>gi|224119576|ref|XP_002318108.1| predicted protein [Populus trichocarpa]
 gi|222858781|gb|EEE96328.1| predicted protein [Populus trichocarpa]
          Length = 439

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 100/417 (23%), Positives = 179/417 (42%), Gaps = 37/417 (8%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFN------SHVRRYKVGQENFIQSFLTEM-QWMR 63
           +          Y+H PFC K+C YCDF       ++         N+I+    E+     
Sbjct: 16  LHQHNHPPTSAYIHLPFCRKRCHYCDFPIVALGSTNPTDNDPRISNYIELLQREIVSTRS 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                  + ++FFGGGTPSL+ P+ +  ILD +   + V    EI++E +P + +    +
Sbjct: 76  DFDTIPPLETVFFGGGTPSLVSPRMVLSILDTLRVKFGVCEGAEISMEMDPGTFDGRKVK 135

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
                GVNR+SLGVQ+ +E+ L+  GR H   E   AI +  +      S DLI +LP Q
Sbjct: 136 DLMGMGVNRVSLGVQAFQEELLKSCGRAHGVKEVYEAIEILGSCGVENWSVDLISSLPLQ 195

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   WE  L+  +     H+S+Y L +E+GT F  ++  G+  LP E  + + Y +   +
Sbjct: 196 TPQMWEESLRLTIEARPKHVSVYDLQVEQGTKFGALYTPGEFPLPCETQSAEFYRMASRM 255

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +  G   YEIS++   G E  HN  YW+   + G G G+ S +          ++++  
Sbjct: 256 LADVGYRHYEISSYCEDGYECKHNYTYWKNKPFYGFGLGSASYLNGLRFSRPRKMKEYM- 314

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECE 359
            +++ +            + ++  A + +M+ LR   G+ ++ +    G +L     +  
Sbjct: 315 GYVENLENGVVNYCGNNLVDAKDLAVDIVMLSLRTARGLDLRSFAEAFGGSLVHSLCKVY 374

Query: 360 RNLQRQGFIERVQFSR------------------------LRCT-QRGMTMLDSVIA 391
           +     G +  +   R                        +R +   G  + + +I+
Sbjct: 375 QPYIESGHVVCLDEERRAMTVDEFNTLFLNEDEIAKGLSYIRLSDPDGFLLSNELIS 431


>gi|167765247|ref|ZP_02437360.1| hypothetical protein BACSTE_03635 [Bacteroides stercoris ATCC
           43183]
 gi|167696875|gb|EDS13454.1| hypothetical protein BACSTE_03635 [Bacteroides stercoris ATCC
           43183]
          Length = 337

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 102/338 (30%), Positives = 172/338 (50%), Gaps = 9/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++      + +I+FGGGTPS +  ++   + + I K + +    EIT+EANP  +   
Sbjct: 1   MRKEYLRGEPVETIYFGGGTPSQLAEEDFREVFETIRKYYGMEHCREITLEANPDDLTEA 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                +    NRIS+G+Q+ ++ +L+ L R HNA++A+ A+   R+  F  +S DLIY L
Sbjct: 61  YAAMLQNLPFNRISMGIQTFDDSTLKLLNRRHNAAQAVNAVKHCRHAGFNNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T  +W+ +LQ+A+S  V+H+S Y LT E+GT  Y++ +   +    E  +V  ++  
Sbjct: 121 PGETDERWKRDLQQAVSLNVEHISAYHLTYEEGTRIYELLQAHRIREVDEESSVRFFSTL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                + G   YEISN       S HN +YW+   Y+G GP AHS           S+EK
Sbjct: 181 IDTLGSAGYEHYEISNFCRSDMYSRHNTSYWKGIPYLGCGPSAHSFNTDTREWNVASLEK 240

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC- 358
           +  +      +N   + E+E L      +E +M  +R R G+ + D E   G+ L   C 
Sbjct: 241 YIHAI-----ENNQRLSEQEHLDRTTCYNECIMTSIRTRWGVPLNDIEQKFGKELWQYCF 295

Query: 359 --ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              R     G +E    +RL  +++G+ + D +I++L 
Sbjct: 296 DMARPHLDCGNLEIYDNNRLCLSRKGIFVSDGIISDLM 333


>gi|312129610|ref|YP_003996950.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella
           byssophila DSM 17132]
 gi|311906156|gb|ADQ16597.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella
           byssophila DSM 17132]
          Length = 376

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/387 (27%), Positives = 186/387 (48%), Gaps = 23/387 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC + C YCDF  H       +   + +   E++        +++ +++FGG
Sbjct: 1   MHLYLHIPFCKQACHYCDF--HFSTQLSYKAKMVDAMCKEIELNSSYLVEKNLETLYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+    +  +L  I  ++++ +  E T+EANP  +  +  Q +++ GV RISLG+Q
Sbjct: 59  GTPSLLSNSELEKVLKSIQYHYSLENIKEFTLEANPDDIHPDRLQLWKELGVTRISLGIQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ------WEMEL 191
           +  E  L+F+ R H   E   A+ L     F   S DLIYA     +         + ++
Sbjct: 119 TFNEVFLKFMNRAHTGIEGERALQLLFEYGFEHSSADLIYAKTGYHLDTERQAEILKKDI 178

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +    Y + H+S Y LTIE  T+F K      L   SE  +V+ Y +      + G   Y
Sbjct: 179 EILSRYPLKHVSAYHLTIEPDTVFSK----WKLAEVSEEYSVEQYKIVTDTLGSMGYEQY 234

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E+SN +  G+ ++HN  YW+  +Y+GIGP AHS              K    ++  + + 
Sbjct: 235 EVSNFAKDGSYAIHNSAYWKGHEYLGIGPSAHSYNGNSRQWNIAHNHK----YMSAIEEG 290

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFI 368
                E E LS  ++ +++L+ GLR   G+S+K+   +   +L  E    L R   +G +
Sbjct: 291 RIP-CEVEILSKAEKLNDYLLTGLRTIWGVSLKEISRIY-LDLPQEFRDTLARLTSEGLL 348

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLAV 395
            + + + +R +     + D + + L +
Sbjct: 349 VQEEDN-IRISPTARLLSDKIASELFI 374


>gi|165976391|ref|YP_001651984.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|307250211|ref|ZP_07532167.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|165876492|gb|ABY69540.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306857740|gb|EFM89840.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 455

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 167/403 (41%), Gaps = 25/403 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L 
Sbjct: 39  FKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLF 98

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R ++ I +GGGTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +
Sbjct: 99  TNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLK 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
             G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ + 
Sbjct: 159 SIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVE 218

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L+R +    D +S++       + F    K  D +LP+    + +   T      
Sbjct: 219 SFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLGG 277

Query: 246 HGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
           +G     + + +           + + + N+  Y      D +G+G  A S +     + 
Sbjct: 278 NGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQN 337

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                K  + +   V + G A+ +   L+ +      ++  L     +     +     +
Sbjct: 338 H----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQID 393

Query: 354 L------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 394 FKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGRLLIRNIC 435


>gi|260808973|ref|XP_002599281.1| hypothetical protein BRAFLDRAFT_64361 [Branchiostoma floridae]
 gi|229284558|gb|EEN55293.1| hypothetical protein BRAFLDRAFT_64361 [Branchiostoma floridae]
          Length = 381

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 132/353 (37%), Positives = 206/353 (58%), Gaps = 10/353 (2%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           +  + E   + Q +G R ++S+FFGGGTPSL  P  +A++L+ I+++  + ++ E+T+EA
Sbjct: 3   RCLVQETATLLQQSGVRRVNSVFFGGGTPSLALPHTMAVVLETISQHALLPADAEVTLEA 62

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RM 171
           NPSS E +  + ++ AG+NR+SLG+Q+     L  LGR+H+  +++ A+   R +FP R+
Sbjct: 63  NPSSTETDKLREFKTAGINRLSLGIQAFSPPDLHLLGRDHSVEDSLRALQEGRTLFPGRV 122

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DLI+  P QT+  W  ELQ+ALS   DH+SLYQLT+E+GT  ++  +     +P  + 
Sbjct: 123 SIDLIFGRPGQTVEAWRGELQQALSVCDDHVSLYQLTLERGTALFRQVEKKQQTVPDPDT 182

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KV 288
             DLY   +      G   YE+SN +  GAES HNL+YWR   YIG+GPGAH R     +
Sbjct: 183 MADLYACARETLQNAGFQQYEVSNFARNGAESSHNLSYWRGKQYIGVGPGAHGRFACKGL 242

Query: 289 GSHRVAISIEK-HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
           G       I+   P+ W+  V + GHA  ++  LS     +E LM+GLR  EG++ + W 
Sbjct: 243 GRTDREARIQTLEPQQWMGRVERLGHATAKRTSLSQLDILEEILMLGLRTTEGLANERWV 302

Query: 348 MLA-GRNLDIECERNLQRQGF----IERVQFSRLRCTQRGMTMLDSVIANLAV 395
             + G +L      ++  QGF    +  +  S LR T  G+ +LDS+I +L +
Sbjct: 303 RFSGGTSLHDIFGTSVAAQGFVNAGLLELSHSVLRATHTGLAVLDSIIPDLLL 355


>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
 gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
          Length = 470

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 86/408 (21%), Positives = 158/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y    +    G  +  + +Y H PFC   C YC  N  + + K   + ++     E+  
Sbjct: 48  DYHHWLKQRQIGACARGVSLYAHIPFCNTVCYYCACNKIITKDKSRADTYLDYLERELAL 107

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +       ++ + FGGGTP+ +    +  ++  I +++ +  + E +IE +P  V  +
Sbjct: 108 HAEYLQGHPQLAQLHFGGGTPTFLSDAQMTRLMQAIGRHFQLVPHGEYSIEIDPRKVTAD 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
           N +     G NR+S+GVQ  + Q    + R  +  E  A I  AR   F  +S DLIY L
Sbjct: 168 NVKHLASLGFNRMSVGVQDFDPQVQAAVNRIQSLEETRAVIDAARASGFKSVSIDLIYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+   +  L+  L    D L+ Y       TLF    +  +  LPS +  +D+  + 
Sbjct: 228 PHQTLESVQTTLETVLEIRPDRLAFYNYAHLP-TLFMPQRRINEADLPSPSAKLDILQMA 286

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +  G     + + +           +     N+  Y      D I IG  +  +V 
Sbjct: 287 VQTLTDAGYVFIGMDHFALPDDDLAVALRQGRLQRNFQGYSTHADHDLIAIGVSSIGKVG 346

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              H+     EK  E +   +      V+    LS++      ++  L  R  +S+    
Sbjct: 347 ASYHQN----EKDIERYYAALDAGHLPVMRGMHLSADDLLRRAIIQALMCRFALSMDAMG 402

Query: 348 MLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
              G +        L+R       G +   +   +  T +G  ++ ++
Sbjct: 403 ESFGIDFRQYFAPELERLADHADLGLLTMDEEW-ITITPKGRFLIRTI 449


>gi|331001000|ref|ZP_08324636.1| coproporphyrinogen dehydrogenase [Parasutterella excrementihominis
           YIT 11859]
 gi|329569775|gb|EGG51539.1| coproporphyrinogen dehydrogenase [Parasutterella excrementihominis
           YIT 11859]
          Length = 466

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 176/412 (42%), Gaps = 26/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            +        TG  +  L +YVH PFC   C +C  N  V +     + +++    E + 
Sbjct: 44  DFKKVLNARGTGDNTADLSLYVHIPFCANVCFFCGCNKEVTKDHCRSKEYLEVLSKECEL 103

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  Q+ G + +  + FGGG+P+ +  + I  ++D I  ++T++ + EI+IE +P S  V+
Sbjct: 104 VSAQIGGNKEVVQLHFGGGSPTFLNNEEIFQVMDIIRSHFTLAPDAEISIEVDPRSTPVD 163

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYAL 179
             +   KAG NR+S+GVQ  + +    + R        A +  AR N F  ++ DLIY L
Sbjct: 164 KVEVLAKAGFNRMSIGVQDFDNRVQIAVNRVQPFEMTKAVLDAARANGFKSINMDLIYGL 223

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q+   +EM L + +  + D ++LY         F    +     LPS    V +    
Sbjct: 224 PFQSRKTFEMTLDKVIELSPDRIALYHFAHLPE-HFKPQRRINAEDLPSTPEKVGIMMDA 282

Query: 240 QSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVK 287
               SA+G H   + + + +  E   +  N     N+  Y      D + +G  + S+V 
Sbjct: 283 IKRLSANGYHFIGMDHFAKVTDELAKAQENGTLQRNFQGYSTKPECDMVALGVSSISKVN 342

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                   +  +  ES+   +R    A      L+ + +    ++M L  +  +   D E
Sbjct: 343 GC----YAANPRDLESYYAAIRSGNLATNRGYLLNDDDRLRAKVIMELMCQFKVVKADIE 398

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G N +          ++ + +G + R++   +  T +G  ++ +V  N 
Sbjct: 399 KKFGVNFNEYFDFELNNLKHFEAEGLV-RLEPDFIEVTPKGKLLVRAVAMNF 449


>gi|309388917|gb|ADO76797.1| oxygen-independent coproporphyrinogen III oxidase [Halanaerobium
           praevalens DSM 2228]
          Length = 407

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/398 (29%), Positives = 191/398 (47%), Gaps = 24/398 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KCPYCDF S V+  K G   +  +   E++ +   T  + + +I+FGGG
Sbjct: 11  AIYLHLPFCSSKCPYCDFYS-VQYTKKGVGQYWAALFMELEDLAAKTENKLVKTIYFGGG 69

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSLIEP  I  I+  I   + V+   EIT+E NP+SV       +++AG+NR+S+G+QS
Sbjct: 70  TPSLIEPNLIKDIIKKIKNKFKVTPTAEITMEINPASVSEEKIINFKRAGINRLSIGIQS 129

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              Q L FLGR  N+ +    + L  N F   S DLI+ALP Q++  +E +L+  L +  
Sbjct: 130 FNNQHLSFLGRKTNSLQNKKILKLVANNFKNYSVDLIFALPDQSLEDFEKDLKELLDFFP 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+SLY L I + T FY+ +  G L LP+E +   +Y L  +     G   YEISN S  
Sbjct: 190 PHISLYNLEIHENTPFYQKYNQGKLKLPTEELDAQMYKLALNKLKQAGYQHYEISNFSQK 249

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW--------------L 305
           G  + HN  YW Y  Y+ +GPGA        ++   ++  + + +              L
Sbjct: 250 GYRAQHNYIYWLYQPYLALGPGASGFDGNCRYQNLSNLNYYLDYYNPQRLDYYDLDDYNL 309

Query: 306 KMVRK-------NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           + ++K         + +     L  +++  E+  + LR   G+    +    G       
Sbjct: 310 EKLKKIDCLRDHKKNKIRNITCLKPKEKWGEYSFLALRTDLGLFYHKFYQKFGLEFKSIY 369

Query: 359 ERNLQRQGFIE--RVQFSRLRCTQRGMTMLDSVIANLA 394
           +  +     ++  +    R++ T RG  + + V     
Sbjct: 370 KEEIAELKALDLLKENNERIKLTTRGKEVANEVFLKFL 407


>gi|46143390|ref|ZP_00204462.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
          Length = 363

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/366 (31%), Positives = 184/366 (50%), Gaps = 25/366 (6%)

Query: 42  RRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIA 97
            +  + +  +IQ  L ++       +   G R I SIF GGGTPSL   + IA +L  + 
Sbjct: 9   AKGVIPEAEYIQHLLADLSQDLTAYQLAIGNRKIHSIFIGGGTPSLFSAEGIAYLLAEVE 68

Query: 98  KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           K      ++EIT+EANP + E   F GY + GV RIS+G+QS E + L  LGR H+++EA
Sbjct: 69  KRIPFEEHIEITLEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDSNEA 128

Query: 158 IAAI----HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             A+    + A++     + DL++ LP Q++ Q   +L++ ++ A  HLS YQLTIE  T
Sbjct: 129 KQAVIFAQNSAKSGLQSFNIDLMHGLPNQSVAQALDDLRQGIALAPPHLSWYQLTIEPNT 188

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +FY         LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+G
Sbjct: 189 MFYYRQP----TLPDDDELWDIFEQGHQLLTAAGYEQYETSAYAKKGYQCRHNLNYWRFG 244

Query: 274 DYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
           DY+ IG GAH ++   +  +   S  KHP+ +++     G     ++ +    +  EF M
Sbjct: 245 DYLAIGCGAHGKISYPTGEIYRFSKTKHPKGYMR-----GEYRYSQDLIELADRPFEFFM 299

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECERN----LQRQGFIERVQFSRLRCTQRGMTMLDS 388
              RL E    +++E   G  LD E  R        + +I   +    + TQ G   L+ 
Sbjct: 300 NRFRLLEATPKQEFEFYTG--LDREIVRPTVDWALSKNYIMETEK-HWQITQHGKLFLNE 356

Query: 389 VIANLA 394
           ++    
Sbjct: 357 LLEGFL 362


>gi|323341658|ref|ZP_08081891.1| coproporphyrinogen dehydrogenase [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464083|gb|EFY09276.1| coproporphyrinogen dehydrogenase [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 366

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/373 (28%), Positives = 177/373 (47%), Gaps = 26/373 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDF     R+   ++   Q  +  +Q +  L G   + +I+ GGG
Sbjct: 5   ALYVHIPFCDHICGYCDF----TRFHYARQISDQFMIRLIQQINVLPGD--LKTIYVGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +E   +  +L  +     ++   E T E NP ++   N Q     GVNR+SLGVQ+
Sbjct: 59  TPTSLENDQLEALLKALK--PKLADEYEWTFEGNPENLTEENVQMLHNYGVNRMSLGVQT 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  +GR+H   +    + L R I    +S DL+Y LP Q++  +E  ++  ++  
Sbjct: 117 THDDLLEKIGRHHKFYDVEVGVKLLRKIGIENISLDLMYGLPGQSLESFESSMRDVIALK 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y LT+E  +LF +      +      +  +++     +    G   YEISN + 
Sbjct: 177 PDHVSIYALTVEPNSLFGRR----GIQPVPIELETEMFLSCIQLMEGAGYEQYEISNFAL 232

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G+ S HN  YWRY D+  +GPG  S +K    R   + +     +LK       A  E 
Sbjct: 233 PGSRSQHNQVYWRYEDFYALGPG--SSLKHNHQRKTWTTK--LGMYLK-----EDAYHEV 283

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
             L+ E +  EF+MMGLRL++G++   ++   G  L+      +     +  + +     
Sbjct: 284 IDLTLEDEMFEFMMMGLRLKDGVAYSRFQERFGVALEDVFSDAIAEGISRKLLYKSD-DV 342

Query: 376 LRCTQRGMTMLDS 388
           L+ T  G  MLD 
Sbjct: 343 LKTTFEGFVMLDD 355


>gi|152978066|ref|YP_001343695.1| coproporphyrinogen III oxidase [Actinobacillus succinogenes 130Z]
 gi|150839789|gb|ABR73760.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           succinogenes 130Z]
          Length = 455

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E          L +YVH PFC K C +C  N  + R++   + ++     E+     
Sbjct: 37  NDFETAAARYPDRPLSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDFLEKEITNRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+ + I +GGGTP+ +     A ++D +  N+ ++ N EI+IE +P  +E++  + 
Sbjct: 97  LFKNRTATQIHWGGGTPTYLSEAQSARLMDMLKSNFNIAENAEISIEMDPREIELSMLEH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NRIS+GVQ   ++  + + R  +     A +  AR   F   + DLIY LP QT
Sbjct: 157 LRNIGFNRISMGVQDFNKEVQKAVNREQDEDFIRALLVRARELGFQSTNLDLIYGLPFQT 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   LQ+ +    D LS++       + F    K  D  LPS    + +   T    
Sbjct: 217 VESFMFTLQKVIELNPDRLSVFNYAHLP-SRFAGQVKIKDKDLPSPETKLSILQNTIETL 275

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +A G     + + +    E   +  N     N+  Y      D +G+G  A S +     
Sbjct: 276 AAAGYKFIGMDHFAKPDDELAIAQQNGVLHRNFQGYTTQEECDLLGLGVSAISLLGDSYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V + G A+ +   L+ E      ++  L     +     E    
Sbjct: 336 QN----QKELKQYYADVDEKGIALHKGLTLTEEDCLRRDVIKALICNFKLDYAAIEQQYH 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+   + L   G  + ++ + +  + +G  ++ ++ 
Sbjct: 392 IDFNTHFAEDLALLKPLAEDGLAD-IRPNGITVSSKGRLLIRNIC 435


>gi|311105444|ref|YP_003978297.1| oxygen-independent coproporphyrinogen III oxidase 1 [Achromobacter
           xylosoxidans A8]
 gi|310760133|gb|ADP15582.1| oxygen-independent coproporphyrinogen III oxidase 1 [Achromobacter
           xylosoxidans A8]
          Length = 476

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 160/412 (38%), Gaps = 26/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y  A +       +  L +YVH PFC   C YC  N  V R+      ++ +   E++ 
Sbjct: 54  DYRQALQQRRAAAPAEPLSLYVHIPFCESVCYYCACNKVVTRHHGRAARYLDALAAEIEL 113

Query: 62  -MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +R+L     +S + FGGGTP+ +  + ++ ++  + + +   ++ EI+IE +P +    
Sbjct: 114 HVRELGEGVPVSQLHFGGGTPTFLSDEELSGLMANLRRAFRFETDAEISIEVDPRTATPE 173

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYAL 179
                R+ G NR+S GVQ  + +    + R  +  +  A +  AR +    ++ DLIY L
Sbjct: 174 RLAHMRELGFNRLSFGVQDFDPRVQAAVHRVQSFEDVRALMQSARALGYVSVNMDLIYGL 233

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +   + + ++   D ++LY       T F    +  +  LP     V L +  
Sbjct: 234 PLQTTESFARTIAQVIALRPDRIALYAYAHLP-TRFKPQRRINEADLPDRETRVGLLSAA 292

Query: 240 QSITSAHGLHAYEISNHSFLG--------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +  G           LH  N+  Y      D + +G  A  R+
Sbjct: 293 IDGFLKQGYAYIGMDHFALEGDALAVAKQKGELHR-NFQGYSTQPDRDLVALGVSAIGRI 351

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                + A    K  + +   +     A+     LS++      ++M +  +  +     
Sbjct: 352 GNTYSQNA----KVLDEYYAAIEAGRFAIERGLTLSADDLVRREIIMDIMCQGRVDFGQI 407

Query: 347 EMLAGRNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E   G        + LQ+     +  +  ++   L+ T  G   + +V    
Sbjct: 408 EARHGLRFADSFGQELQQMANLAELGLVNLRAGELQVTGLGWYFVRAVAMAF 459


>gi|303257716|ref|ZP_07343728.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderiales
           bacterium 1_1_47]
 gi|302859686|gb|EFL82765.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderiales
           bacterium 1_1_47]
          Length = 467

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 176/412 (42%), Gaps = 26/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            +        TG  +  L +YVH PFC   C +C  N  V +     + +++    E + 
Sbjct: 45  DFKKVLNARGTGDNTADLSLYVHIPFCANVCFFCGCNKEVTKDHCRSKEYLEVLSKECEL 104

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  Q+ G + +  + FGGG+P+ +  + I  ++D I  ++T++ + EI+IE +P S  V+
Sbjct: 105 VSAQIGGNKEVVQLHFGGGSPTFLNNEEIFQVMDIIRSHFTLAPDAEISIEVDPRSTPVD 164

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYAL 179
             +   KAG NR+S+GVQ  + +    + R        A +  AR N F  ++ DLIY L
Sbjct: 165 KVEVLAKAGFNRMSIGVQDFDNRVQIAVNRVQPFEMTKAVLDAARANGFKSINMDLIYGL 224

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q+   +EM L + +  + D ++LY         F    +     LPS    V +    
Sbjct: 225 PFQSRKTFEMTLDKVIELSPDRIALYHFAHLPE-HFKPQRRINAEDLPSTPEKVGIMMDA 283

Query: 240 QSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVK 287
               SA+G H   + + + +  E   +  N     N+  Y      D + +G  + S+V 
Sbjct: 284 IKRLSANGYHFIGMDHFAKVTDELAKAQENGTLQRNFQGYSTKPECDMVALGVSSISKVN 343

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                   +  +  ES+   +R    A      L+ + +    ++M L  +  +   D E
Sbjct: 344 GC----YAANPRDLESYYAAIRSGNLATNRGYLLNDDDRLRAKVIMELMCQFKVVKADIE 399

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G N +          ++ + +G + R++   +  T +G  ++ +V  N 
Sbjct: 400 KKFGINFNEYFDFELNNLKHFEAEGLV-RLEPDFIEVTPKGKLLVRAVAMNF 450


>gi|307261447|ref|ZP_07543118.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868842|gb|EFN00648.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 455

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 166/403 (41%), Gaps = 25/403 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L 
Sbjct: 39  FKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLF 98

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R ++ I +GGGTP+ ++    A ++  + +++ VS   EI+IE +P  +E+N     +
Sbjct: 99  TNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSVEAEISIEMDPREIELNMLDHLK 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
             G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ + 
Sbjct: 159 SIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVE 218

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L+R +    D +S++       + F    K  D +LP+    + +   T      
Sbjct: 219 SFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLGG 277

Query: 246 HGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
           +G     + + +           + + + N+  Y      D +G+G  A S +     + 
Sbjct: 278 NGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQN 337

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                K  + +   V + G A+ +   L+ +      ++  L     +     +     +
Sbjct: 338 H----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQID 393

Query: 354 L------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 394 FKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGRLLIRNIC 435


>gi|253987658|ref|YP_003039014.1| coproporphyrinogen III oxidase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779108|emb|CAQ82268.1| oxygen-independent coproporphyrinogen III oxidase [Photorhabdus
           asymbiotica]
          Length = 457

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+           L +Y+H PFC K C +C  N  + R K   + ++Q    E++   +
Sbjct: 39  AAFMQAAVLYPERPLSLYIHIPFCHKLCYFCGCNKLITRQKHKVDQYLQLLEREIRERSK 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ ++   I+ ++  +  ++    + EI+IE +P  +E++    
Sbjct: 99  LFSGRKVSQMHWGGGTPTYLDKDQISKLMGVLRDHFDFLPDAEISIEIDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
               G NR+S+GVQ   ++  R + R  +     A +  AR   F   S DLIY LPKQT
Sbjct: 159 LHHQGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALVARARETGFNSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R L+ A D +S++        LF    K  +  LPS    +D+   T +  
Sbjct: 219 SESFAFTLERVLALAPDRMSIFNYAHLPN-LFAAQRKIKEHDLPSAEQKLDILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +GIG  A S +     
Sbjct: 278 TGSGYQFIGMDHFARPDDELAVAQREGKLHRNFQGYTTQGDCDLLGIGVSAISLLGDSYS 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   + K GHA+     LS +      ++  L     ++  + E   G
Sbjct: 338 QN----QKELKTYYVELEKQGHALWRGLTLSQDDCIRRDVIKALICNFRLNFANIEQQYG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N       D++    L   G +E V   R++   RG  ++ ++ 
Sbjct: 394 LNFTHYFAEDLQLLVPLAEDGLVE-VNEKRIQVMPRGRLLIRNIC 437


>gi|238020864|ref|ZP_04601290.1| hypothetical protein GCWU000324_00759 [Kingella oralis ATCC 51147]
 gi|237867844|gb|EEP68850.1| hypothetical protein GCWU000324_00759 [Kingella oralis ATCC 51147]
          Length = 467

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 161/405 (39%), Gaps = 23/405 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+S  EN ++G     + +YVH PFC   C YC  N  + +     + ++     EM  
Sbjct: 48  EYVSVLENTLSGSL-KPVSLYVHIPFCNVICYYCGCNKVITKDTSKADEYLTYLEKEMAL 106

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L G   ++ + FGGGTP+ +    +  +   I +++ +  + E +IE +P  V   
Sbjct: 107 LAPHLHGRHKLAQLHFGGGTPTFLSDAQLERVFRMIREHFELLPDGEYSIEIDPRKVSRE 166

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
           +     + G NR+S+G+Q  + +    + R     E    I  AR   F  +S DLIY L
Sbjct: 167 SVFKLGELGFNRMSVGIQDFDPKVQAAVNRIQTVEETREVIEAAREAGFKSISVDLIYGL 226

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++   +  L+  LS + D L+LY        +F    +     +PS    +D+    
Sbjct: 227 PHQSVASIKPTLETVLSLSPDRLALYHYAHLPH-IFKPQRRIDTNAVPSSEEKLDILQYA 285

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
             +    G     + + +           E     N+  Y      D + IG  +  ++ 
Sbjct: 286 VKLLDERGYVFIGMDHFAKPEDELAIALREGRLQRNFQGYSTYADCDLVAIGVSSIGKIG 345

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     ++    +   +      V+    L+++      ++  L  R  + + D++
Sbjct: 346 NTYSQN----QRDLNDYYADLDAGKLPVMRGYELNADDVMRRQIIQDLMCRFALELADYQ 401

Query: 348 MLAGRNLDIEC--ERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSV 389
                    E    + +   G IE + +   L+ T +G  ++ ++
Sbjct: 402 ADFADYFAEEIPDLQRIAALGLIEWQPETGSLKVTPKGRFLIRNI 446


>gi|288937893|ref|YP_003441952.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
 gi|288892602|gb|ADC60920.1| oxygen-independent coproporphyrinogen III oxidase [Klebsiella
           variicola At-22]
          Length = 457

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC K C +C  N  V R +   + ++     E+     
Sbjct: 39  AEFDAAVARYPQRPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDVLEQEIIHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R +  + +GGGTP+ +    I+ ++D +  ++  S+  EI+IE +P  +E++    
Sbjct: 99  QFASRQVKQLHWGGGTPTYLNKAQISRLMDLLRSHFHFSAEAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  + +     +H AR I F   + DLIY LPKQT
Sbjct: 159 LRTEGFNRLSMGVQDFNKEVQRLVNREQDEAFIFDLLHHAREIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+      D LS++       TLF    K  D  LPS    +++   T    
Sbjct: 219 PESFAFTLQKVAELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAEQKLEILQETIGSL 277

Query: 244 SAHGLHAYEISNHSFLGAE----SLH---NLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +A G     + + +    E      H   + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFARPDDELAVAQRHGILHRNFQGYTTQGDTDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK------- 344
           +     +K  + + + V + G A+     L+ +      ++  L     + +        
Sbjct: 338 QN----QKELKLYYQQVAEQGDALWRGIALTRDDCLRRDVIKALICNFRLDIGAVEAQWD 393

Query: 345 -DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            D++     +L  +    L   G +  V    ++ T +G  ++ ++ 
Sbjct: 394 VDFQSYFAEDL--KLLAPLAHDGLVA-VDDKAIQVTAKGRLLIRNIC 437


>gi|260771619|ref|ZP_05880539.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
 gi|260613396|gb|EEX38595.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
          Length = 462

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 87/406 (21%), Positives = 166/406 (40%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++          + +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IAEFDMACARYPQRPVSLYIHIPFCHKLCYYCGCNKIITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    ++ ++  +   +    + EI+IE +P  +E++   
Sbjct: 103 PLLLSRPVTQLHFGGGTPTFLTNAQMSRLMTLLRAEFNFQPDAEISIEVDPREIELSVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NRIS+GVQ  ++Q  +++ R  +    +  +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRSEGFNRISIGVQDFDKQVQQYVNREQDEQFIVDLVARAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   LQ+ +      LS++        LF    K     LPS    + +   T S 
Sbjct: 223 TVASFHATLQQVIEMRPGRLSVFNYAHMPE-LFAAQRKIKSDFLPSIEEKMAILQDTIST 281

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E   +  N     N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYTTQGDCDLLGFGVSAISMVGD-- 339

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             V    +K  + + + V +  HA+ +   L S+      ++  L     +  +  E   
Sbjct: 340 --VYAQNQKDLKRYYQQVDEMRHALWKGVSLDSDDLLRREVIKQLICNFQLDKQAIEQHF 397

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +   +++L           +E V    +R T RG  ++ ++ 
Sbjct: 398 KLRFNDYFQQDLALLQTFIDDQLVE-VDSRFIRVTLRGRLLIRNIC 442


>gi|262404853|ref|ZP_06081407.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC586]
 gi|262348937|gb|EEY98076.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC586]
          Length = 462

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 162/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  +++    
Sbjct: 103 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  D  LP+    + +   T + 
Sbjct: 223 TAETFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKDADLPAAEEKLAILQQTIAT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAVAQRNGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +   + E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTEIEREF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +       +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDELVT-VDEKMIEVTLRGRLLIRNIC 442


>gi|258623138|ref|ZP_05718150.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM573]
 gi|258584621|gb|EEW09358.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM573]
          Length = 480

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 163/406 (40%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  ++++   
Sbjct: 121 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLDVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  D  LP+    + +   T + 
Sbjct: 241 TAETFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKDADLPAAEEKLAILQQTIAT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAVAQRNGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +   + E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTEIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +       +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDELVT-VDEKMIEVTLRGRLLIRNIC 460


>gi|309780456|ref|ZP_07675205.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
 gi|308920784|gb|EFP66432.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia sp.
           5_7_47FAA]
          Length = 494

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 164/406 (40%), Gaps = 28/406 (6%)

Query: 2   KYLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            YL A         +    L +Y+H PFC   C YC  N  + + +     ++++   EM
Sbjct: 57  DYLDALHRRAAIAPALHAPLSLYMHLPFCANLCYYCGCNKVITKDRSRSARYVETLAREM 116

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             +    GP R ++ + +GGGTP+ +    +  ++    +++ ++++ EI++E +P   +
Sbjct: 117 AMVASQIGPLRRVTQLHWGGGTPTFLAHDEMRAVMAATREHFDLATDGEISVELDPRHAD 176

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +   + G NR SLG+Q  +    R + R  +  E    +  AR   F  +SFDLIY
Sbjct: 177 DATLEVLAEIGFNRASLGIQDFDPDVQRAVHRIQSVEETRRVVDTARRLGFESISFDLIY 236

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q    +   L R L  A D LS+Y        LF    +     LP+ +  +DL  
Sbjct: 237 GLPYQRTETFNATLDRVLEMAPDRLSVYSYAHLPH-LFKAQRRIDMFTLPTADEKLDLLA 295

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
           +T     A G     + + +           E     N+  Y      D +  G  A SR
Sbjct: 296 MTVERLVAEGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDMLAFGVSAISR 355

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V      V    EK  +++   +     AV+    L+ +      L+  L     ++++ 
Sbjct: 356 VGD----VYAQNEKDLDAYYARIDAGELAVLRGMSLTPDDHVRRALIGELMCGFELNMRA 411

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +    G +       +++    L+  G + +V   R+  T +G  +
Sbjct: 412 FGARHGLDFKRSFADELQALAPLEEAGLV-KVGDERIVITPQGRLL 456


>gi|15805169|ref|NP_293856.1| coproporphyrinogen III oxidase [Deinococcus radiodurans R1]
 gi|6457795|gb|AAF09719.1|AE001875_5 coproporphyrinogen III oxidase, putative [Deinococcus radiodurans
           R1]
          Length = 388

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/382 (29%), Positives = 182/382 (47%), Gaps = 25/382 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   CPYCDF+  + R     E +++    E            + +++ GGG
Sbjct: 17  HLYVHVPFCPSICPYCDFH-VLTRQAGLVERYLERLEQE-AAELAAAYAVDLDTVYLGGG 74

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  +++ + ++       E T+E NP +V       +R  G +R S+GVQS
Sbjct: 75  TPSFLRDHELRALVESVQRHLGW-GRAENTLEINPGTVSTERAALWRSLGFDRASVGVQS 133

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L++ +L+FLGR H+A +A  A+        R+S DLI A+P Q +     ++   +   V
Sbjct: 134 LDDATLKFLGRRHDARQARDAVSRLIAQDFRVSGDLITAVPGQPLDS---DIHGLVELGV 190

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LTIE GT F +     D     E+   + +  T+ + + HG   YE+SN++  
Sbjct: 191 GHVSAYTLTIEPGTEFARRGVQVD-----EDAEREGFERTEELLAGHGFSRYEVSNYARA 245

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVG----SHRVAISIEKHPESWLKMVRKNGHAV 315
           G ES HNL+YW+   Y+G+GPGA     V               H   WL  V + G   
Sbjct: 246 GQESRHNLSYWQGKTYLGLGPGAAGHYPVPTPGADALTLRRTNPHLHDWL--VGQQG--- 300

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQ 372
            E   +   +   + L MGLRLR G+ + D    +G ++       ++RQ   G +E   
Sbjct: 301 -ETLLVDPHEYVTDALFMGLRLRRGLDLADLTRRSGVDVAGRYGLVIERQVRLGLLEH-S 358

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            + LR T +G  +L+ ++    
Sbjct: 359 GTNLRATAQGWWVLNRIVREFM 380


>gi|295105851|emb|CBL03394.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 369

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 180/377 (47%), Gaps = 20/377 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFCV++C YCDF +        + + +++    +++   +     ++ +++ GG
Sbjct: 8   ALYLHLPFCVRRCGYCDFATSAVPADAPEIDAYVEDLCLQIRRKAKEGELGALETVYLGG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS I    ++++L  ++ +  ++  VE T+EANP S+     +     GVNR+S+GVQ
Sbjct: 68  GTPSHIGLARLSMLLYTLSLSMHLTPEVECTMEANPESLTERMVRDAWALGVNRLSIGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S +++ L  LGR H+A +A  AI  A   F  +S DL+  +P Q    +E  ++ A +  
Sbjct: 128 SFDDEVLAVLGRAHSADDARRAIEAAHTRFENVSVDLMCGIPGQGAESFEASVREAAALG 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y LTIE  T F      GD+  P ++V      +   + +  G   YE+++++ 
Sbjct: 188 AAHVSVYPLTIEAHTPFDAAVLAGDMEEPDDDVEAAHMEIAACVLAEAGYERYEVASYAR 247

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HN+ YW    Y+G+G  A +  +    R+ +              ++G    + 
Sbjct: 248 PGFECRHNIAYWTGVPYLGLGRSAATMTQNAERRMRV--------------QDGRVTDD- 292

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQFSRLR 377
             + +   A E LM+G+R+  G+  +  E  A    D       L+ +G +      R R
Sbjct: 293 --MDARGMAAEDLMLGMRMTCGVPDELVEAAAVLLPDAPAVLAELEGEGLVAHAD-GRWR 349

Query: 378 CTQRGMTMLDSVIANLA 394
            T RG    + +   L 
Sbjct: 350 PTDRGWLCGNELYGRLF 366


>gi|269140839|ref|YP_003297540.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|267986500|gb|ACY86329.1| coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Edwardsiella tarda EIB202]
 gi|304560599|gb|ADM43263.1| Coproporphyrinogen III oxidase, oxygen-independent [Edwardsiella
           tarda FL6-60]
          Length = 457

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 169/406 (41%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +      +L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFLRAVARYPDRALSLYVHIPFCHKLCYFCGCNKIVTRQSHKADEYLDKLALEIAARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +    I+ ++  + +++T +   EI+IE +P  + ++    
Sbjct: 99  LFAGRTVSQLHWGGGTPTFLNKAQISRLMTLLRRHFTFAPQAEISIEIDPREIALDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NR+S+GVQ   +     + R  +     + +  AR I F   + DLIY LP+QT
Sbjct: 159 LRQEGFNRLSMGVQDFNKTVQTLVNREQDEEFIFSLLRHAREIGFTSTNIDLIYGLPRQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              ++  LQ+ +    D LS++        LF    K  D  LPS +  + +   + +  
Sbjct: 219 PESFDFTLQKVIELNPDRLSIFNYAHMPK-LFAAQRKIKDADLPSADHKLAILQQSIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TGVGYQFIGMDHFAHRDDELAVAQRAGKLHR-NFQGYTTQGDSDLLGLGVSAISMIGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   V   G+A+     +S +      ++ GL     +     E   
Sbjct: 337 AQNR----KVLKEYYAAVEAQGNALWRGLAMSRDDCIRRDVIKGLICNFRLDFAPIEQQY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D+   R L + G +E  + + +  T RG  ++ ++ 
Sbjct: 393 GIRFVDYFIEDLLLLRPLAQDGLVELGE-TAINVTPRGRLLIRNIC 437


>gi|262172875|ref|ZP_06040553.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           MB-451]
 gi|261893951|gb|EEY39937.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           MB-451]
          Length = 462

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 163/406 (40%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  ++++   
Sbjct: 103 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLDVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  D  LP+    + +   T + 
Sbjct: 223 TAETFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKDADLPAAEEKLAILQQTIAT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAVAQRNGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +   + E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTEIEREF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +       +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDELVT-VDEKMIEVTLRGRLLIRNIC 442


>gi|269103714|ref|ZP_06156411.1| coproporphyrinogen III oxidase oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268163612|gb|EEZ42108.1| coproporphyrinogen III oxidase oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 457

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 163/404 (40%), Gaps = 23/404 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E          L +YVH PFC K C YC  N  + R++   + ++ +   E+     
Sbjct: 39  AEFETACHQYPERKLSLYVHIPFCHKLCYYCGCNKVITRHQEKADVYLDALALEIAQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L GPR +S + +GGGTP+ +  + I  +++ + +++   ++ EI+IE +P  +E++    
Sbjct: 99  LCGPRQVSQLHWGGGTPTFLTKEQITRLMNLLREHFDFDADAEISIEIDPRRIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R+ G NRIS+GVQ   ++  + + R  +       +  A+   F   + DLIY LP Q 
Sbjct: 159 LRQEGFNRISIGVQDFNKEVQKVINREQDEKFIFDLVQRAKELGFRSTNLDLIYGLPLQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L   L      LS++        LF    K  D  LP     + +   + +  
Sbjct: 219 QQAFSDTLHEVLKMKPGRLSVFNYAHMPQ-LFAAQRKIKDEWLPGPKEKLAMLQQSIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFALPDDELAVAQRNGILHRNFQGYTTQGDCDLLGLGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   + +  HA+ +   L  +      ++  L     +   D E +  
Sbjct: 338 QN----QKELKAYYADIEQQQHALWKGVQLDQDDLIRREVIKALICNFQLKKHDIEAMFD 393

Query: 352 RNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
              D     +LQ         + RV    +    +G  ++ ++ 
Sbjct: 394 LKFDQYFAEDLQLLQTFINDDLVRVDDEMIYVEPKGRLLIRNIC 437


>gi|297566420|ref|YP_003685392.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           silvanus DSM 9946]
 gi|296850869|gb|ADH63884.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           silvanus DSM 9946]
          Length = 371

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/377 (31%), Positives = 180/377 (47%), Gaps = 18/377 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   CPYCDF+  VRRY    E +++    E   + +      + +++ GGG
Sbjct: 3   SLYVHVPFCPTLCPYCDFH-VVRRYGGVVEAYLERLAEEAAALYERFPG-PLETLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +   +   W V S  E+T+EANP ++     +  +  GVNR+SLGVQS
Sbjct: 61  TPSFLRNRELEQLFRALP--WNVPSIHEVTMEANPGTLNPERLELLKDLGVNRLSLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L  LGR H    A+ A+ ++     R S DLI  LP Q    +  +L+ A +  V
Sbjct: 119 FQDGVLESLGRAHGRKGALRAVEMSLQAGFRTSIDLILGLPGQ---DFAADLREAAALGV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L IE GT F       D     E++    +++ + +  A G   YE+SN +  
Sbjct: 176 GHVSAYTLQIEPGTPFAARGVRLD-----EDLEAAAFDMAEQVLGAVGFVRYEVSNFAKP 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G ES HN  YWR G +  +GP A      G+    +   +     L   R      +  E
Sbjct: 231 GQESAHNQVYWRAGFWGALGPAAVGHYPQGAEDREVYSVRATNPPLPRWRAGEAPSL--E 288

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFSRL 376
            ++  + A E LM+GLRL EG+ V + E   G  L    E   R L+ Q  +   +  R+
Sbjct: 289 VITPLEHAREALMLGLRLCEGVDVNEIEQRTGLELWERLEAVVRELEGQELL-WARGKRI 347

Query: 377 RCTQRGMTMLDSVIANL 393
              + G+ +L  +I  L
Sbjct: 348 GVARAGVAILHRIILRL 364


>gi|260767544|ref|ZP_05876480.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio furnissii
           CIP 102972]
 gi|260617444|gb|EEX42627.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio furnissii
           CIP 102972]
 gi|315178736|gb|ADT85650.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio furnissii
           NCTC 11218]
          Length = 462

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 166/405 (40%), Gaps = 23/405 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ Y+   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDILEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +  + I+ ++  + + +   ++ EI+IE +P  ++++   
Sbjct: 103 SLLVGRHVTQLHFGGGTPTFLTNKQISRLMTLLREEFQFDADAEISIEVDPREIQLDVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ  +++  + + R  +    I  +   +   F   + DLIY LPKQ
Sbjct: 163 HLRSEGFNRLSIGVQDFDKEVQKLVNREQDEQFIIDLVARGKALGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L + L+     LS++        LF    K  D  LP+    + +   T + 
Sbjct: 223 TLETFSQTLAQVLAMKPGRLSVFNYAHMPQ-LFAAQRKIKDEDLPAPEEKMAILQYTINT 281

Query: 243 TSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E   +  N     N+  Y      D +G G  A S +    
Sbjct: 282 LTDAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYTTQGECDLVGFGVSAISMIGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L S+      ++  L     +  +  E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVSLDSDDLLRREVIKQLICNFQLDKRAIERQF 397

Query: 351 GRNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
               +    ++L          +  V    +R T RG  ++ ++ 
Sbjct: 398 RVRFNDYFRQDLALLQTFVDDELVTVDEHHIRVTLRGRLLIRNIC 442


>gi|23335028|ref|ZP_00120266.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Bifidobacterium longum DJO10A]
 gi|189439444|ref|YP_001954525.1| coproporphyrinogen III oxidase [Bifidobacterium longum DJO10A]
 gi|189427879|gb|ACD98027.1| Coproporphyrinogen III oxidase [Bifidobacterium longum DJO10A]
          Length = 469

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 97/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIAEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD + K W+++ + EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAVRKIWSIAPDAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +     ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAVGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +SN +  G ES HNL YWR  D+ G+GPGAHS      H  A++   HP+S
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGLGPGAHS------HYNAVTEADHPQS 288



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G+G  + S      H +      HP  W   + +N     + E ++ E+  +E +M+GLR
Sbjct: 342 GLGVVSVS------HGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLR 395

Query: 337 LREGISVKDWEM-----------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           L EG+ +                   RN+ ++    +  +G I      R+  T+RG  +
Sbjct: 396 LHEGLDLDRINRAINDAGMSSTPQTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLL 455

Query: 386 LDSVIANLA 394
            DSVI    
Sbjct: 456 NDSVIEQFF 464


>gi|119897643|ref|YP_932856.1| coproporphyrinogen III oxidase [Azoarcus sp. BH72]
 gi|119670056|emb|CAL93969.1| coproporphyrinogen oxidase [Azoarcus sp. BH72]
          Length = 463

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 82/417 (19%), Positives = 164/417 (39%), Gaps = 35/417 (8%)

Query: 2   KYLSAYENNM---------TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFI 52
           +++ A++ N           G  S  L +Y H PFC   C YC  N  + +       ++
Sbjct: 32  RFVEAFDANALQDWLAKRAVGGVSRPLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYL 91

Query: 53  QSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           +    E++  +  L G R ++ +  GGGTP+ +  + +  ++D + + + ++ N E +IE
Sbjct: 92  KYLEKEIEMQVAALGGSRQVTQLHLGGGTPTFLSHEEMHQLMDAVRRFFNLAPNGEYSIE 151

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPR 170
            +P  V+ +  +     G NR+S+GVQ   +   R + R  +  E    I  AR   F  
Sbjct: 152 VDPRKVDFDTVEMLANLGFNRMSVGVQDFSDDVQRAVNRVQSVEETRLVIDAARATGFKS 211

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           +S DLIY LPKQ +  +   L++ L  + D +SLY      G LF    +     +P+  
Sbjct: 212 VSLDLIYGLPKQNVISFNRTLEQVLDISPDRISLYSYAHLPG-LFKPQRRILQSDMPTPE 270

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGI 278
             + +  L     +  G     + + +           +   + N+  Y      D +  
Sbjct: 271 AKLQILQLAIRRLTEAGYVYIGMDHFAKPDDELTVAQRQGRLHRNFQGYSTQAECDLLAF 330

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           G  A  +V     +      K  + +   + ++   V+    L+++      ++  L   
Sbjct: 331 GVSAIGKVGAAYAQNV----KTLDEYYDALDRDQLPVLRGVELTADDLLRRSVIQALMCH 386

Query: 339 EGISVKDWEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
             +S++  E+    +        L      Q  G +E +    +     G  ++  +
Sbjct: 387 FELSMQSIEIAHLIDFRDYFAAELADLAEMQAAGLLE-IDGDWITVLPAGRMLVRGI 442


>gi|307245869|ref|ZP_07527954.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306853229|gb|EFM85449.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 455

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 167/404 (41%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 38  DFKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ I +GGGTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     
Sbjct: 98  FTNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ +
Sbjct: 158 KSIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R +    D +S++       + F    K  D +LP+    + +   T     
Sbjct: 218 ESFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLG 276

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +           + + + N+  Y      D +G+G  A S +     +
Sbjct: 277 GNGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  + +   V + G A+ +   L+ +      ++  L     +     +     
Sbjct: 337 NH----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 393 DFKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGHLLIRNIC 435


>gi|225024662|ref|ZP_03713854.1| hypothetical protein EIKCOROL_01544 [Eikenella corrodens ATCC
           23834]
 gi|224942551|gb|EEG23760.1| hypothetical protein EIKCOROL_01544 [Eikenella corrodens ATCC
           23834]
          Length = 461

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 154/408 (37%), Gaps = 30/408 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A +N   G     L +Y+H PFC   C YC  N  + +     + ++     E   
Sbjct: 43  DYIQAVQNRTPG----PLSLYIHIPFCNTICYYCGCNKIITKDTTRADQYLGYLKKEFAL 98

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +L   +  ++ + FGGGTP+ +    +  +   I +++T+    E +IE +P  V   
Sbjct: 99  QAELLQGKPELAQLHFGGGTPTFLSDAQLNFVFSLIREHFTLMPQGEYSIEIDPRKVSRE 158

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G NR+S+G+Q  ++Q  + + R  +  E    I  AR   F  +S DLIY L
Sbjct: 159 TVLFLGSLGFNRMSVGIQDFDQQVQQAVNRIQSEEETRVVIDAAREAGFQSVSVDLIYGL 218

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    +  L + L+ A D L++Y        +F    +     +P  N  +D+    
Sbjct: 219 PHQTPATMQQTLDKVLALAPDRLAVYHYAHLPH-IFKPQRRIDTNAVPDSNTKLDMLQQI 277

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
                + G     + + +           E     N+  Y      D I +G  +  ++ 
Sbjct: 278 VQRLGSEGYVFIGMDHFAKPQDELAVALREGRLQRNFQGYSTHADCDLIAVGLSSIGKIG 337

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               R+    ++  E++   +      +     L  +      L+  L  R G+   D+E
Sbjct: 338 ----RIYSQNQRQLEAYYADLDAGRLPLFRGYLLDEDDLLRRRLIQDLMCRFGLEFADYE 393

Query: 348 MLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               +               L  +G +E      L  T +G  ++ ++
Sbjct: 394 AECRQPFAQYFAAELADMTTLAAKGLVELHTTG-LTVTPKGRFLIRNI 440


>gi|55980466|ref|YP_143763.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           thermophilus HB8]
 gi|55771879|dbj|BAD70320.1| oxygen-independent coproporphyrinogen III oxidase [Thermus
           thermophilus HB8]
          Length = 365

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 124/378 (32%), Positives = 185/378 (48%), Gaps = 23/378 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   CPYCDF+  VRR     E +++    E Q + +   P+ + +++ GGG
Sbjct: 3   SLYVHVPFCPTLCPYCDFH-VVRRGPGWVEAYLRRLKEEAQALHERF-PKPLRTLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +  +   +   W ++   E+T+EANP ++     +  +  GVNR+SLGVQS
Sbjct: 61  TPSYLRDRELVALFQSLP--WALAEGAEVTLEANPGTLSPGRLRLLQDLGVNRLSLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +E  L+FLGR H    A+ A+ +A     R+S DLI  LP Q     E +L+ A    V
Sbjct: 119 FQELVLKFLGRAHGRKGALRAVEMALEWGFRVSIDLILGLPMQ---DVEADLKEAARLGV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +EKGT F  +    D                + +    GL  YE+SN +  
Sbjct: 176 GHVSAYTLQVEKGTPFALLGLKED-----PEREAWAMERAEEVLGETGLFRYEVSNFARE 230

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEK 318
           G E+ HNL YWR G ++ +GP A  +        A+     P   WL+     G A  E 
Sbjct: 231 GEEARHNLVYWRAGFWLALGPAATGQYPGEGGAYALRRTAPPLPRWLR-----GEAPKE- 284

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFSR 375
           E +S  + A E LM+GLRLREG+ V   E   G  L    +     L ++G ++ +   R
Sbjct: 285 EAISPLEHAKESLMLGLRLREGVDVGAVEERTGLALFPLLQGRAVELAQEGLLQVL-GKR 343

Query: 376 LRCTQRGMTMLDSVIANL 393
           L  T +   +L  V+  L
Sbjct: 344 LLPTPKAFPLLHRVVLAL 361


>gi|305665345|ref|YP_003861632.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
 gi|88710100|gb|EAR02332.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
          Length = 346

 Score =  279 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 11/349 (3%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            + +   E+   ++      I +I+FGGGTPS+++   I  ++  +  N+ V  N EIT+
Sbjct: 1   MVAALKKELMLRQEKLAGEIIETIYFGGGTPSVLDINEINDLIKTVYSNYEVVENPEITL 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           EANP  + +N      ++ +NR+S+G+QS  E+ L  + R HNA EA   I  A   F  
Sbjct: 61  EANPDDLSMNKIIELSQSPINRLSIGIQSFFEEDLLLMNRAHNAKEAEECITEATKYFDN 120

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           +S DLIY +P  T  +W   +++ALSY + H+S Y LT+E  T      + G +    E 
Sbjct: 121 ISIDLIYGIPNMTNERWLQNIEKALSYNIPHISSYALTVEPKTALANFIQKGKMSPLDEE 180

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
           +A + + +   + + +G   YEISN    G  S +N  YW    Y+GIGP AHS      
Sbjct: 181 LAQEHFQMLYEVLTINGYDCYEISNFGKPGYYSKNNTAYWLGKTYLGIGPSAHSY---DG 237

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            R + ++  +P+ +LK +        E E LS   + +E++M GLR   G+S++      
Sbjct: 238 RRRSWNVSNNPK-YLKSIESGQLP-SEVEELSLNDKYNEYIMTGLRTSWGVSLQRISQEF 295

Query: 351 GRN----LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G+     L  + E+ L +Q  +  ++  +L  T++G  ++D + ++L V
Sbjct: 296 GKERLNYLTRQSEQYLDQQLLV--LKEDQLIATKKGKFLVDGIASDLFV 342


>gi|319937617|ref|ZP_08012021.1| hypothetical protein HMPREF9488_02857 [Coprobacillus sp. 29_1]
 gi|319807259|gb|EFW03871.1| hypothetical protein HMPREF9488_02857 [Coprobacillus sp. 29_1]
          Length = 360

 Score =  279 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 23/378 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDF     + +   E ++ + + E+Q  +Q++G     +++ GGG
Sbjct: 3   SLYVHIPFCDHICAYCDFCKVFYKTE-WVEKYLDALVYEIQH-KQISGNY--DTVYIGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  + D ++         E TIE NP S++      +    +NR+S+GVQ+
Sbjct: 59  TPSSLNLLQLQKLFDILSPFTKCVK--EFTIEVNPESMDQEKIDLFVNNSINRLSVGVQT 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L  + R H + E I  I  A+      ++ DL+Y LP QT+     ++    S  
Sbjct: 117 FQDKLLGAINRVHTSLETIEVIQQAQAKGITDINVDLMYGLPNQTLKDVYKDIDIVNSLD 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L +E+ TL        +     +      Y          G+  YE+SN+ +
Sbjct: 177 ASHVSIYSLILEEHTLLKNQ----NYQPLDDEEDAKWYQEINRYLETKGMIHYEVSNY-Y 231

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               SLHNL YW Y DY GIG  AHS ++        S+ ++          N   + E 
Sbjct: 232 KYKPSLHNLVYWHYEDYDGIGLSAHSLIQHHRLENTKSLTQYL---------NHQYLSED 282

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE--RVQFSRL 376
             L    +  E +MMGLRL EG+ + +   +   +  I+ +  +Q+   ++   ++   +
Sbjct: 283 IILEPADELFEKIMMGLRLIEGLEINEVNQMFDIDFLIKYQEPIQKYLKLKMLEIKDGYI 342

Query: 377 RCTQRGMTMLDSVIANLA 394
           + T  GM  L+S++ +  
Sbjct: 343 KTTSLGMNYLNSILIDFL 360


>gi|17548001|ref|NP_521403.1| coproporphyrinogen III oxidase [Ralstonia solanacearum GMI1000]
 gi|17430307|emb|CAD17072.1| probable oxygen-independent coproporphyrinogen III oxidase
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 510

 Score =  279 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 158/405 (39%), Gaps = 28/405 (6%)

Query: 3   YLSAYEN--NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A      +       L +YVH PFC   C YC  N  V +       +I +   EM 
Sbjct: 80  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIGALAREMA 139

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + +  GP R  + + +GGGTP+ +    +  ++    +++ ++S+ E+++E +P     
Sbjct: 140 MVARHIGPLRQATQLHWGGGTPTFLSHDEMRDVMAATREHFALTSDAEVSVELDPRHASD 199

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
              +     G NR SLG+Q  +    R + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 200 ATLEVLAGLGFNRASLGIQDFDADVQRAIHRVQSVEQTRRVVDSARRLGFESISFDLIYG 259

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q    +   L R L  A D LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 260 LPHQHTATFNATLDRVLEMAPDRLSVYSYAHLPH-LFKPQRRIDALALPSADEKLDLLAM 318

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 319 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGMSAISRV 378

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + ++ +
Sbjct: 379 GD----VYAQNEKELDAYYARIDAGELPVLRGLTLTPDDHVRRALIGELMCGFELDMRLF 434

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
               G N       ++     L+  G + +V   R+  T +G  +
Sbjct: 435 GTRHGLNFRQSFASELTALAPLEDAGLV-KVGDERIVITPQGRLL 478


>gi|322514560|ref|ZP_08067593.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Actinobacillus ureae ATCC 25976]
 gi|322119499|gb|EFX91586.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Actinobacillus ureae ATCC 25976]
          Length = 352

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/360 (31%), Positives = 184/360 (51%), Gaps = 21/360 (5%)

Query: 46  VGQENFIQSFLTEMQ----WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT 101
           + +  +IQ  L ++       ++  G R I SIF GGGTPSL   + IA +L  + K   
Sbjct: 2   IPEAEYIQHLLADLSKDLTAYQEAIGERKIHSIFIGGGTPSLFAAEGIAYLLAEVEKRIP 61

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
              ++EIT+EANP + E   F GY + GV RIS+G+QS E + L  LGR H+++EA  A+
Sbjct: 62  FEEHIEITLEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDSNEAKQAV 121

Query: 162 ----HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
               + A++     + DL++ LP Q++ Q   +L++ ++ A  HLS YQLTIE  T+FY 
Sbjct: 122 IFAQNSAKSGLQSFNIDLMHGLPNQSVAQALDDLRQGIALAPPHLSWYQLTIEPNTMFYY 181

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
                   LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY+ 
Sbjct: 182 RQP----TLPDDDELWDIFEQGHQLLTAAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLA 237

Query: 278 IGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           IG GAH ++   +  +   S  KHP+ +++     G     ++ +    +  EF M  LR
Sbjct: 238 IGCGAHGKISYPTGEIYRFSKTKHPKGYMR-----GEYRYSQDLIELADRPFEFFMNRLR 292

Query: 337 LREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L E    +++E   G + +I          + +I   +    + TQ G   L+ ++    
Sbjct: 293 LFEATPKQEFEFYTGLDREIVRPTLDWALSKNYITETEK-YWQITQHGKLFLNELLEGFL 351


>gi|159903900|ref|YP_001551244.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889076|gb|ABX09290.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9211]
          Length = 415

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 118/407 (28%), Positives = 194/407 (47%), Gaps = 35/407 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLT 66
                 Y+H PFC ++C YCDF       K   E          +++    E+    Q +
Sbjct: 2   KEPRSAYLHIPFCHRRCFYCDFPIVPLGDKARGEGAAGSKSIKSYLKLLFREISLAPQAS 61

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               +S+++ GGGTPSL+ P  +  +L  +  ++ +    E+T+E +P+S    + + Y 
Sbjct: 62  ---PLSTVYIGGGTPSLLTPNQLGDLLQHLFDHFGLQDGAEVTVEVDPASFNEEDLREYL 118

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPK 181
           + G+ R+SLG QS + ++L  LGR H++S+   +    +  +        S DLI  LPK
Sbjct: 119 EIGITRLSLGAQSFDNEALSMLGRRHDSSQLFDSCQWIKKAYSQGNLFSWSLDLIQNLPK 178

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q +  WE +L++ L  +  HLS+Y L+IE+GT+F      G+L LPS+  A D+ +LT S
Sbjct: 179 QNLFTWEQQLKKLLEISPPHLSIYDLSIEEGTVFAWRQSRGELNLPSDEFAADITSLTSS 238

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           I    G   YEISN +  G  S HN  YW    + G G GA S          +   K  
Sbjct: 239 ILQEAGYSRYEISNFALPGHTSRHNRVYWSGARWWGFGLGATSC----PWGKRLERPKTR 294

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQ---QADEFLMMGLRLREGISVKDWEMLAGRN----- 353
            ++   + K     ++K  L + Q     DE  ++GLR REGI+ ++  +  G +     
Sbjct: 295 AAYEAWLLKQELEGIDKSLLPTNQSSIDLDELFLVGLRRREGINFEEMAIEWGWDQTHSN 354

Query: 354 -LDIECERN---LQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLAV 395
               E E +      +G+++R Q  R   T   GM + + V+  + +
Sbjct: 355 IFLKELENHWNGAIEKGWLKR-QGKRFVLTDPVGMNVSNQVLVEMLL 400


>gi|229828441|ref|ZP_04454510.1| hypothetical protein GCWU000342_00502 [Shuttleworthia satelles DSM
           14600]
 gi|229793035|gb|EEP29149.1| hypothetical protein GCWU000342_00502 [Shuttleworthia satelles DSM
           14600]
          Length = 416

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 53/414 (12%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           KKC YCDFNSH    K  Q  +  + + E+ W  +L G + ++S+F GGGTPS ++   +
Sbjct: 2   KKCLYCDFNSHPGSPKE-QAAYAGALVKEIDWWGRLIGRKQVASVFVGGGTPSWLDYSLM 60

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             I   + +N++++ N E+++E NP +V     + Y++ G+NR+S+G+QS  +  L  LG
Sbjct: 61  EQIFAAVYRNFSLARNAEVSLELNPGTVTAKALRAYQRMGINRVSIGLQSSNDDELALLG 120

Query: 150 RNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R H+ ++ +      R   F  ++ D++  LP QT  + +  LQ       +H+S Y L 
Sbjct: 121 RIHSWNDFLRTFEHVRAAGFSNVNVDIMTGLPLQTEDKLKRTLQMVTMLRPEHISAYSLI 180

Query: 209 IEKGTLFYKMHK---------DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +E GT FY+ +          +  L LP  ++   LY++ ++  +  G   YEISN++  
Sbjct: 181 VEPGTPFYERYAGDIARRERGEKTLELPDSDLEYALYDMARAFLTGKGYRQYEISNYARE 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRV--------------------------KVGSHRV 293
           G    HNL YW    Y+G G GA S +                                 
Sbjct: 241 GYACRHNLGYWERKPYLGFGVGAASLLCDSLIDRHSDMDLLMRKDPAQRSCAYPNLRFSN 300

Query: 294 AISIEKHPESW----------LKMVRKNGHAVVEKEF--LSSEQQADEFLMMGLRLREGI 341
               +++ + W          L  V  +   +  K    L+  +  +EFL +GLR  +GI
Sbjct: 301 IPETDRYIDLWEKYDPGQQLDLDEVLADAPWIDSKTVQKLTRREAMEEFLFLGLRKTKGI 360

Query: 342 SVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
              D+    G  +       L+   ++G + R Q   +  T+ G  + + V+A 
Sbjct: 361 RETDFFNAFGLPIGSVYGSTLESQSKRGLLRR-QGGMIALTKAGTDISNQVLAE 413


>gi|307247835|ref|ZP_07529871.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306855637|gb|EFM87804.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
          Length = 352

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 25/362 (6%)

Query: 46  VGQENFIQSFLTEMQW----MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT 101
           + +  +IQ  L ++       +   G R I SIF GGGTPSL   + IA +L  + K   
Sbjct: 2   IPEAEYIQHLLADLSQDLTAYQLAIGNRKIHSIFIGGGTPSLFSAEGIAYLLAEVEKRIP 61

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
              ++EIT+EANP + E   F GY + GV RIS+G+QS E + L  LGR H+++EA  A+
Sbjct: 62  FEEHIEITLEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDSNEAKQAV 121

Query: 162 ----HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
               + A++     + DL++ LP Q++ Q   +L++ ++ A  HLS YQLTIE  T+FY 
Sbjct: 122 IFAQNSAKSGLQSFNIDLMHGLPNQSVAQALDDLRQGIALAPPHLSWYQLTIEPNTMFYY 181

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
                   LP ++   D++     + +A G   YE S ++  G +  HNLNYWR+GDY+ 
Sbjct: 182 RQP----TLPDDDELWDIFEQGHQLLTAAGYEQYETSAYAKKGYQCCHNLNYWRFGDYLA 237

Query: 278 IGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           IG GAH ++   +      S  KHP+ +++     G     ++ +    +  EF M   R
Sbjct: 238 IGCGAHGKISYPTGEVYRFSKTKHPKGYMR-----GEYRYSQDLIELADRPFEFFMNRFR 292

Query: 337 LREGISVKDWEMLAGRNLDIECERN----LQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           L E    +++E   G  LD E  R        + +I   +    + TQ G   L+ ++  
Sbjct: 293 LLEATPKQEFEFYTG--LDREIVRPTVDWALSKNYITETEK-HWQITQHGKLFLNELLEG 349

Query: 393 LA 394
             
Sbjct: 350 FL 351


>gi|83747414|ref|ZP_00944453.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
 gi|83725871|gb|EAP73010.1| Coproporphyrinogen oxidase, anaerobic [Ralstonia solanacearum
           UW551]
          Length = 525

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 158/405 (39%), Gaps = 28/405 (6%)

Query: 3   YLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A         +    L +YVH PFC   C YC  N  V +       +I++   EM 
Sbjct: 94  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMA 153

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + +  GP R  + + +GGGTP+ +    +  ++    K++ ++S+ EI++E +P     
Sbjct: 154 MIARHIGPLRQATQLHWGGGTPTFLSHDEMRDVMAATRKHFALTSDAEISVELDPRHAGD 213

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +        G NR SLG+Q  +      + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 214 DTLAVLADLGFNRASLGIQDFDADVQHAIHRVQSVEQTRHVVDSARRLGFQSISFDLIYG 273

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q +  +   L R L  A D LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 274 LPHQHIDTFNATLDRVLEMAPDRLSVYSYAHLPH-LFKPQRRIDVLALPSADEKLDLLAM 332

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 333 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGMSAISRV 392

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + +  +
Sbjct: 393 GD----VYAQNEKELDAYYARIDAGRLPVLRGLTLTPDDHVRRALIGELMCGFELDMCAF 448

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
               G N       ++     L+  G + +V   R+  T +G  +
Sbjct: 449 GARHGLNFRQTFTGELAALAPLEDAGLV-KVGDERIVITPQGRLL 492


>gi|227545897|ref|ZP_03975946.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|227213691|gb|EEI81537.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           longum subsp. infantis ATCC 55813]
          Length = 469

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 97/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIEEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD + K W+++ + EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAVRKIWSIAPDAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +     ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAVGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +SN +  G ES HNL YWR  D+ G+GPGAHS      H  A++   HP+S
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGLGPGAHS------HYNAVTEADHPQS 288



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G+G  + S      H +      HP  W   + +N     + E ++ E+  +E +M+GLR
Sbjct: 342 GLGVVSVS------HGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLR 395

Query: 337 LREGISVKDWEM-----------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           L EG+ +                   RN+ ++    +  +G I      R+  T+RG  +
Sbjct: 396 LHEGLDLDRINRAINDAGMSSTPQTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLL 455

Query: 386 LDSVIANLA 394
            DSVI    
Sbjct: 456 NDSVIEQFF 464


>gi|23465421|ref|NP_696024.1| oxygen-independent coproporphyrinogen III oxidase [Bifidobacterium
           longum NCC2705]
 gi|312132852|ref|YP_004000191.1| hemn [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483588|ref|ZP_07942568.1| radical SAM superfamily protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690964|ref|YP_004220534.1| coproporphyrinogen III oxidase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|23326070|gb|AAN24660.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum NCC2705]
 gi|311773821|gb|ADQ03309.1| HemN [Bifidobacterium longum subsp. longum BBMN68]
 gi|316914963|gb|EFV36405.1| radical SAM superfamily protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455820|dbj|BAJ66442.1| putative coproporphyrinogen III oxidase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 469

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 97/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIEEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD + K W+++ + EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAVRKIWSIAPDAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +     ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAVGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +SN +  G ES HNL YWR  D+ G+GPGAHS      H  A++   HP+S
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGLGPGAHS------HYNAVTEADHPQS 288



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G+G  + S      H +      HP  W   + +N     + E ++ E+  +E +M+GLR
Sbjct: 342 GLGVVSVS------HGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLR 395

Query: 337 LREGISVKDWEM-----------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           L EG+ +                   RN+ ++    +  +G I      R+  T+RG  +
Sbjct: 396 LHEGLDLDRINRAINDAGMSSTPQTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLL 455

Query: 386 LDSVIANLA 394
            DSVI    
Sbjct: 456 NDSVIEQFF 464


>gi|258626628|ref|ZP_05721458.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM603]
 gi|258581132|gb|EEW06051.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio mimicus
           VM603]
          Length = 480

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 161/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  +++    
Sbjct: 121 SLLTGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFDFADDAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  D  LP+    + +   T   
Sbjct: 241 TAETFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKDADLPAAEEKLAILQQTIVT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAVAQRNGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +   + E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTEIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +       +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDELVT-VDEKMIEVTLRGRLLIRNIC 460


>gi|307257007|ref|ZP_07538783.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864491|gb|EFM96398.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 455

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 167/403 (41%), Gaps = 25/403 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L 
Sbjct: 39  FKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPLF 98

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R ++ I +GGGTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     +
Sbjct: 99  TNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHLK 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
             G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ + 
Sbjct: 159 SIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNVE 218

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L+R +    D +S++       + F    K  D +LP+    + +   T      
Sbjct: 219 SFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLGG 277

Query: 246 HGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
           +G     + + +           + + + N+  Y      D +G+G  A S +     + 
Sbjct: 278 NGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQN 337

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
                K  + +   V + G A+ +   L+ +      ++  L     +     +     +
Sbjct: 338 H----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQID 393

Query: 354 L------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 394 FKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGHLLIRNIC 435


>gi|304437686|ref|ZP_07397638.1| possible coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304369319|gb|EFM22992.1| possible coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 392

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 119/370 (32%), Positives = 185/370 (50%), Gaps = 14/370 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSF-LTEMQWMRQLT 66
            ++ G      G+YVH P+CVKKC YCDF S     +  + E++  +     ++ +  L 
Sbjct: 3   TDVRGAEGEPWGIYVHIPYCVKKCAYCDFVSVPSAPRAAEMEDYAAALTAELLREVPPLR 62

Query: 67  GPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
             R + ++I+ GGGTP+ +    +  +L+ +       + VE T+EANP +V+       
Sbjct: 63  ARRGAAATIYVGGGTPTALPAPLLMGVLETLRTAAG--TPVEWTVEANPGTVDTAYLGAL 120

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R AG NR+SLGVQS ++  L  +GR H A+EA  A H AR   F  +S DL+Y LP QT+
Sbjct: 121 RAAGANRLSLGVQSFDDTLLYGIGRIHTAAEAAQAFHAARAAGFENISIDLMYGLPGQTL 180

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                 +  A + A +HLS+Y LT+E+GT F  M   G L LP+E+ A ++Y+   +   
Sbjct: 181 DHLRRSVAAAAALAPEHLSVYGLTVEEGTPFAAMQAAGRLDLPTEDAAEEMYDFLMAELP 240

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           A G   YEI+N +  G ES HN  YW    Y+G+G  AH  V         + E    ++
Sbjct: 241 ARGYARYEIANFAQPGFESRHNRGYWHMTPYLGLGAAAHGYVDGER----WANEADIPAY 296

Query: 305 LKMVRKNGHA-VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECER 360
           ++ +R        E    + E+  +E+  + LR   GI   D+    GR+L+        
Sbjct: 297 IRAMRAGTSVRTPEDGARTRERAMEEYAFLALRTTAGIDAADFHRRWGRDLEEVYGAVIA 356

Query: 361 NLQRQGFIER 370
           +    G + R
Sbjct: 357 HYAALGLLRR 366


>gi|54310550|ref|YP_131570.1| coproporphyrinogen III oxidase [Photobacterium profundum SS9]
 gi|46914993|emb|CAG21768.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Photobacterium profundum SS9]
          Length = 457

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 170/407 (41%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++          L +Y+H PFC K C YC  N  + R++   + ++ +   E++    
Sbjct: 39  AEFDMACAQYPDRKLSLYIHIPFCHKLCYYCGCNKIITRHQHKADQYLDALEQEIRQRAS 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L G R +S + +GGGTP+ +  +  + ++  +   ++  ++ EI+IE +P  +E++    
Sbjct: 99  LLGDRQVSQLHWGGGTPTFLTKKQASRLMALLRDQFSFDTDAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  + + R  +    +A +  A+   F   + DLIY LPKQ 
Sbjct: 159 LRGEGFNRLSIGVQDFNKEVQKLVNREQDEDFIVAMVQRAKELGFRSTNLDLIYGLPKQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ L      LS++       +LF    K  D  LPS N  + +   T +  
Sbjct: 219 RELFAETLQQVLKMKPGRLSVFNYAHMP-SLFAAQRKIKDDQLPSANEKLGILQDTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E   +  N     N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYATQGDCDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   V++   A+ +   L ++      ++  L     + +KD E    
Sbjct: 338 QN----QKELKTYYSDVQEKRQALWKGVSLDADDLLRREVIKALICNFQLDMKDIEQRFN 393

Query: 352 RNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
              +     +L   G ++         +    +    +G  ++ ++ 
Sbjct: 394 LTFNEYFAEDL---GLLKTFINDELVTIDGQFIHVELKGRLLIRNIC 437


>gi|330444875|ref|ZP_08308530.1| oxygen-independent coproporphyrinogen III oxidase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489185|dbj|GAA03027.1| oxygen-independent coproporphyrinogen III oxidase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 457

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 164/404 (40%), Gaps = 23/404 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E          L +Y+H PFC K C YC  N  + R++   + ++ +   E++    
Sbjct: 39  AEFEMACKQYPDRKLSLYIHIPFCHKLCYYCGCNKIITRHQHKADQYLDALEQEIKQRAT 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L G R +S + +GGGTP+ +  + I+ +++ +  ++    + EI+IE +P  +E++    
Sbjct: 99  LLGDRQVSQLHWGGGTPTFLTAEQISRLMNSLRASFNFDDDAEISIEVDPREIELDILDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q 
Sbjct: 159 LRSEGFNRLSIGVQDFNKDVQKLVNREQDEQFIFAMVERARELGFRSTNLDLIYGLPLQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ L      LS++        LF    K  + +LPS    + +   T +  
Sbjct: 219 REVFAQTLEQVLKMNPGRLSVFNYAHMPK-LFAAQRKISEELLPSAKEKLGILQDTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFAKPDDELAIAQREGILHRNFQGYTTQGECDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + + +  +A+ +   L ++      ++  L     +  K  E    
Sbjct: 338 QN----QKELKHYYRDIEEKQNALWKGVSLDADDLLRREVIKALICNFQLDKKAIEAEFN 393

Query: 352 RNLDIECERNLQRQG-----FIERVQFSRLRCTQRGMTMLDSVI 390
            + D     +L          +  V    +    +G  ++ ++ 
Sbjct: 394 IDFDQYFAEDLALLKTFINDELVSVDEQHIFVELKGRLLIRNIC 437


>gi|260436089|ref|ZP_05790059.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. WH 8109]
 gi|260413963|gb|EEX07259.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. WH 8109]
          Length = 399

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 114/392 (29%), Positives = 188/392 (47%), Gaps = 29/392 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEM-QWMRQLTGPRSI 71
               Y+H PFC ++C YCDF         R         I+ +L+ + + +    G   +
Sbjct: 7   PRSAYLHIPFCHRRCYYCDFAVVPLGDQARADHGPGSRSIREYLSLLHREIASAPGGPPL 66

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+++ GGGTPSL+ P  I  ++D +A  + +    EIT+E +P++ +          GVN
Sbjct: 67  STVYIGGGTPSLLCPDQIGALIDALANKFGLQPGAEITLEMDPATFDAAQLASVLAHGVN 126

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPKQTMTQ 186
           RISLG QS ++  L  LGR H  S+  AAI      +        S DLI  LP+QT+  
Sbjct: 127 RISLGGQSFDDAVLEQLGRRHRQSDLHAAIDWLVQAWRDGVLRSWSLDLIQNLPEQTLAG 186

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  +L +A++    HLS+Y L++E GT+F +    G L LP +++AV L   T    +A 
Sbjct: 187 WNAQLDQAIASQAPHLSIYDLSVEPGTVFDRQRTLGRLKLPKDDLAVALMERTTQRLAAA 246

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YEISN++  G  S HN  YW    + G G GA S        V ++  +   ++ +
Sbjct: 247 GLSRYEISNYARPGHASRHNRVYWSGAGWWGFGMGATS----APWGVRLARPRTRAAYAE 302

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQR 364
            +       + +  L  + Q    L++GLR REG+ ++      G + +    R      
Sbjct: 303 WLDHPPEESIAEAGLPLDDQ----LLVGLRRREGVILQ------GLDAESLLRRWQPFVE 352

Query: 365 QGFIERVQFSRLRC-TQRGMTMLDSVIANLAV 395
           +G++++ +  R       GM + + V+  + +
Sbjct: 353 RGWLQQ-RAGRWCLADPEGMALSNQVLIEVIL 383


>gi|255994711|ref|ZP_05427846.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium saphenum ATCC 49989]
 gi|255993424|gb|EEU03513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Eubacterium saphenum ATCC 49989]
          Length = 414

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/412 (27%), Positives = 196/412 (47%), Gaps = 35/412 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISS 73
             ++LGVY H PFCV+KC YCDF S        ++++ ++   E+ + +++L G   I S
Sbjct: 2   DKSTLGVYAHVPFCVQKCSYCDFLSF-DNSPQVEDDYFKALYRELTFSLKRLAGSYEIDS 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTP++  P+ I  + D  A+   +S + E+TIEANP ++     + Y   G+NRI
Sbjct: 61  VFIGGGTPTVANPKYIEGLFDLFARFGNMSEDAEVTIEANPETLSRQKLKAYESYGINRI 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS + + L  LGR +   +   A+ L A      ++ DLI+  P   +++    ++
Sbjct: 121 SLGVQSFDHKELDTLGRFYTKDQPQKALDLIASGNIDNINIDLIFGFPGNNLSKLLQGIK 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A +    H+SLY L +  GT      +   LV+PS+     +Y   +    A G H YE
Sbjct: 181 QAANSGAKHISLYSLELASGTAISNKVEKNILVMPSDEENRRMYEAAREELDALGFHQYE 240

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH----------RVAISIEKHPE 302
           ISN +       HN+ YWRY  Y+G+G G  S +               R+  ++ K   
Sbjct: 241 ISNFAKKQFACKHNIKYWRYKPYLGVGLGVSSFLSKNDAIRLGVVRDEVRLVHALNKQGL 300

Query: 303 SWLKMVRKNGHA------------------VVEKEFLSSEQQA--DEFLMMGLRLREGIS 342
                + + G+                     ++E + ++ +A   +F++ GLR++EG+ 
Sbjct: 301 LKADALERKGYPGVRFKNTDDMNSYILEGFTKKQEVIQNDIKAGFSDFMITGLRMKEGVD 360

Query: 343 VKDWEMLAGRNLDIECER-NLQRQGFIERV-QFSRLRCTQRGMTMLDSVIAN 392
           +   + + G +L  +       ++G +       RL  T  GM + + V+  
Sbjct: 361 LSVAKSVFGVDLASDIRTCGFIKRGLLVLDGDCGRLALTDLGMDLANRVLIE 412


>gi|33862590|ref|NP_894150.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9313]
 gi|33634506|emb|CAE20492.1| Oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 436

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 116/403 (28%), Positives = 184/403 (45%), Gaps = 31/403 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
               Y+H PFC ++C YCDF       H    K      IQS+L  +Q    L  P   +
Sbjct: 10  PRSAYLHIPFCHRRCFYCDFAVVPLGDHANGAKGSGSASIQSYLQLLQREIALVKPGPTL 69

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           ++++ GGGTPSL+    I  +LD + + + V    EIT+E +P+S +    Q    AGVN
Sbjct: 70  ATVYIGGGTPSLLSSAQIGALLDQLRQRFGVQLGAEITLEMDPASFDQAYLQAVLAAGVN 129

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQTMTQ 186
           R+SLG QS ++  L  LGR H     + A                S DLI  LP Q +  
Sbjct: 130 RVSLGGQSFDDAVLETLGRRHRRHHLLEACGWLHQAHQCGELKSWSLDLIQNLPGQELVA 189

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L  A+     HLS+Y L++E GT+F    + G+L LP  ++A +    T  +    
Sbjct: 190 WKQQLVEAIDTGSPHLSIYDLSVEPGTVFAWRQRRGELDLPDNDLAAEQMQTTSVLLRQE 249

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN++  G  S HN  YW    +   G GA S    G             +W++
Sbjct: 250 GFGRYEISNYALPGHASRHNRVYWSGAGWWAFGQGATS-APWGERLARPRTRDGYCNWIE 308

Query: 307 MVRKNGHAVVEKEFLSSEQQA---DEFLMMGLRLREGISVKDWEMLAGR----------N 353
           +    G    +   ++++ +    DE L++GLR REG+ ++      G           +
Sbjct: 309 VQEAEGL---DSSLVAAQARPLPLDERLLVGLRCREGVDLEALSRAWGWTHEQCNALLPS 365

Query: 354 LDIECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLAV 395
           L +  +  L R G++E +   R + +   GM + + V+  + +
Sbjct: 366 LQVRWQAALDR-GWLE-LHGRRWQLSDPEGMAISNQVLVEMLL 406


>gi|303253558|ref|ZP_07339696.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247959|ref|ZP_07529990.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302647478|gb|EFL77696.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855513|gb|EFM87685.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 455

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 166/404 (41%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++       +  L +YVH PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 38  DFKAAAARYPNRPLSLYVHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ I +GGGTP+ ++    A ++  + +++ VS   EI+IE +P  +E+N     
Sbjct: 98  FTNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSVEAEISIEMDPREIELNMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ +
Sbjct: 158 KSIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKELGFTSTNIDLIYGLPKQNV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R +    D +S++       + F    K  D +LP+    + +   T     
Sbjct: 218 ESFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLG 276

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +           + + + N+  Y      D +G+G  A S +     +
Sbjct: 277 GNGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  + +   V + G A+ +   L+ +      ++  L     +     +     
Sbjct: 337 NH----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 393 DFKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGHLLIRNIC 435


>gi|90414667|ref|ZP_01222638.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
 gi|90324209|gb|EAS40784.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
          Length = 457

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 83/407 (20%), Positives = 171/407 (42%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++          L +Y+H PFC K C YC  N  + R++   + ++ +   E++    
Sbjct: 39  AEFDMACAQYPDRKLSLYIHIPFCHKLCYYCGCNKIITRHQHKADQYLDALEQEIRQRAS 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L G R +S + +GGGTP+ +  +  + ++  +   ++  ++ EI+IE +P  +E++    
Sbjct: 99  LLGDRQVSQLHWGGGTPTFLTKKQASRLMALLRDQFSFDADAEISIEVDPREIELDILDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  + + R  +    +A +  A++  F   + DLIY LPKQ 
Sbjct: 159 LRGEGFNRLSIGVQDFNKEVQKLVNREQDEEFIVAMVQRAKDLGFRSTNLDLIYGLPKQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ L      LS++       +LF    K  D  LPS N  + +   T +  
Sbjct: 219 RELFAETLQQVLKMKPGRLSVFNYAHMP-SLFAAQRKIKDDQLPSANEKLGILQDTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +    E   +  N     N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFALPDDELAVAQRNGVLHRNFQGYATQGDCDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  +++   V++   A+ +   L ++      ++  L     + +KD E    
Sbjct: 338 QN----QKELKTYYSDVQEKRQALWKGVSLDADDLLRREVIKALICNFQLDMKDIEQRFN 393

Query: 352 RNLDIECERNLQRQGFIE--------RVQFSRLRCTQRGMTMLDSVI 390
              +     +L   G ++         +    +    +G  ++ ++ 
Sbjct: 394 LTFNEYFAEDL---GLLKTFINDELVTIDGQFIHVELKGRLLIRNIC 437


>gi|225875026|ref|YP_002756485.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidobacterium capsulatum ATCC 51196]
 gi|225791861|gb|ACO31951.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acidobacterium capsulatum ATCC 51196]
          Length = 392

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 107/393 (27%), Positives = 169/393 (43%), Gaps = 23/393 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSIS 72
           LG+Y+  PFC  KC +C+F S V       + ++   + +M   R          P+++ 
Sbjct: 2   LGLYLSIPFCRSKCTFCNFASGVFPAS-YFDRYVARLVEDMAAARARAAEWGAALPQTVD 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+FGGGTPSL+ P+ +  ++  I   ++V +  EIT EA P+ +         + G NR
Sbjct: 61  TIYFGGGTPSLLPPELVRRLMAAIRDEFSVLAGAEITFEAAPAQLADETLAAMVETGANR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMEL 191
           +S GVQS  +   +  GR H  ++    +  AR      +S DL+  LP QT   W   L
Sbjct: 121 LSFGVQSFVDAEAQATGRLHGRADVFRDVERARAAGIEDVSLDLLAGLPGQTRATWRESL 180

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-----PSENVAVDLYNLTQSITSAH 246
                  V H S+Y L ++  +        G +       P+E+  V +Y       +  
Sbjct: 181 DCLAETGVGHASVYMLEVDDASKLGAEMLAGGVRYGAGLVPNEDAIVAMYEEAVERLAGA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWL 305
           GL  YEISN +  G ES HN  YW    Y+G+G  AHS ++  G   +  +       +L
Sbjct: 241 GLAQYEISNFARAGRESRHNRRYWERRPYLGLGVDAHSMLREAGGRALRFATTDELPPYL 300

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNL 362
           +     G      E LS  Q+ +E   +GLR+ EG+S+       G             L
Sbjct: 301 E-----GAGWARPEPLSRAQELEEAWFLGLRMNEGVSLATLRAEFGAEAVGAFDAVLGEL 355

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +G + R    R+  T  G  + + V      
Sbjct: 356 AAEGLVTRG-GDRIHLTMNGRLLSNEVFERFLA 387


>gi|170718942|ref|YP_001784109.1| coproporphyrinogen III oxidase [Haemophilus somnus 2336]
 gi|168827071|gb|ACA32442.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           somnus 2336]
          Length = 455

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 86/404 (21%), Positives = 165/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++   T   +  L +YVH PFC K C +C  N  + R++   E ++     E+Q    L
Sbjct: 38  DFQQAATRYPTRPLSLYVHIPFCHKLCYFCACNKTITRHQHKVEIYLDYLEKEIQTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R  + I +GGGTP+ +  Q  A ++  + +N+T+S   EI+IE +P  +E++     
Sbjct: 98  FRHRIATQIHWGGGTPTYLSEQQSARLMQMLKENFTISDKAEISIEMDPREIELSMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
            K G NRIS+GVQ   +   + + R  +       +  AR   F   + DLIY LP QT+
Sbjct: 158 YKIGFNRISMGVQDFNKDVQKAVNREQDEEFVRELLIRARELGFRSTNLDLIYGLPFQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L + +    D LS++       + F    K  D  LP+    + +   T     
Sbjct: 218 ESFMFTLHKVIELNPDRLSVFNYAHLP-SRFAGQAKIKDKDLPTPETKLTILQKTIETLG 276

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
                   + + +    E        + + N+  Y      D +G+G  A S +     +
Sbjct: 277 QANYRFIGMDHFAKPDDELAIAQQKGILHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V + G A+ +   ++ E      ++  L     +  +  E     
Sbjct: 337 N----QKDLKQYYTHVEETGLALHKGLVMTQEDCLRRDVIKQLICNFKLDFQPIEQQYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+   + L   G ++ +  + L+ + +G  ++ ++ 
Sbjct: 393 DFKTHFAEDLALLQPLATDGLVD-INDNALQVSAKGRLLIRNIC 435


>gi|113460617|ref|YP_718683.1| coproporphyrinogen III oxidase [Haemophilus somnus 129PT]
 gi|112822660|gb|ABI24749.1| coproporphyrinogen III oxidase, anaerobic [Haemophilus somnus
           129PT]
          Length = 455

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 86/404 (21%), Positives = 165/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++   T   +  L +YVH PFC K C +C  N  + R++   E ++     E+Q    L
Sbjct: 38  DFQQAATRYPTRPLSLYVHIPFCHKLCYFCACNKTITRHQHKVEIYLDYLEKEIQTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R  + I +GGGTP+ +  Q  A ++  + +N+T+S   EI+IE +P  +E++     
Sbjct: 98  FRHRIATQIHWGGGTPTYLSEQQSARLMQMLKENFTISDKAEISIEMDPREIELSMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
            K G NRIS+GVQ   +   + + R  +       +  AR   F   + DLIY LP QT+
Sbjct: 158 YKIGFNRISMGVQDFNKDVQKAVNREQDEEFVRELLIRARELGFRSTNLDLIYGLPFQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L + +    D LS++       + F    K  D  LP+    + +   T     
Sbjct: 218 ESFMFTLHKVIELNPDRLSVFNYAHLP-SRFAGQAKIKDKDLPTPETKLTILQKTIETLG 276

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
                   + + +    E        + + N+  Y      D +G+G  A S +     +
Sbjct: 277 QANYRFIGMDHFAKPNDELAIAQQKGILHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V + G A+ +   ++ E      ++  L     +  +  E     
Sbjct: 337 N----QKDLKQYYTHVEETGLALHKGLVMTQEDCLRRDVIKQLICNFKLDFQPIEQQYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+   + L   G ++ +  + L+ + +G  ++ ++ 
Sbjct: 393 DFKTHFAEDLALLQPLATDGLVD-INDNALQVSAKGRLLIRNIC 435


>gi|255540379|ref|XP_002511254.1| coproporphyrinigen III oxidase, putative [Ricinus communis]
 gi|223550369|gb|EEF51856.1| coproporphyrinigen III oxidase, putative [Ricinus communis]
          Length = 478

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 99/354 (27%), Positives = 165/354 (46%), Gaps = 9/354 (2%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFN------SHVRRYKVGQENFIQSFLTEMQWM 62
           N            Y+H PFC K+C YCDF       S+         N+ +    E+   
Sbjct: 53  NPFHQHDHPPTSAYIHLPFCRKRCHYCDFPIVALGSSNPTETDPRISNYAELLQQEILST 112

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  +     + ++FFGGGTPSL+ P+ ++ ILD +   + +  N EI++E +P + +   
Sbjct: 113 KPNSDSYSPLQTVFFGGGTPSLVSPRIVSSILDTLKLKFGLCKNAEISMEMDPGTFDDKK 172

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALP 180
            +     GVNRISLGVQ+ +++ L+  GR H   E   AI + R+      S DLI +LP
Sbjct: 173 MEELMGLGVNRISLGVQAFQDELLKACGRAHGIEEVYQAIEIIRSCGIGNWSLDLISSLP 232

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   WE  L   +     H+S+Y L +E+ T F  ++  G+  LPSE  + D Y +  
Sbjct: 233 HQTPQMWEQSLSLTVQAQPKHVSVYDLQVEQETKFGILYTPGEFPLPSEIQSADYYRMAS 292

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + S  G   YEIS++   G E  HN  YW+   + G G G+ S V          + ++
Sbjct: 293 RMLSDAGYSHYEISSYCKDGFECKHNFIYWKNKPFYGFGLGSASYVNGVRFSRPRKMREY 352

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             ++++ +              ++  A + +M+  R   G+ ++ +    G +L
Sbjct: 353 M-NYVQNLENGTVDCSGNGNRDAKDLALDVVMLSFRTARGLDLRSFADAFGSSL 405


>gi|189218327|ref|YP_001938969.1| Coproporphyrinogen III oxidase or related Fe-S oxidoreductase
           [Methylacidiphilum infernorum V4]
 gi|189185185|gb|ACD82370.1| Coproporphyrinogen III oxidase or related Fe-S oxidoreductase
           [Methylacidiphilum infernorum V4]
          Length = 363

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 115/373 (30%), Positives = 187/373 (50%), Gaps = 22/373 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFG 77
            +Y H+PFC   CPYC F          +E +  I++ + E++ +          ++F G
Sbjct: 5   HLYFHFPFCSTVCPYCGFYVTTA---ARKEIYLVIEALIREVELLSTTFRLNP-QTLFIG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL +P  I  +L  I K     +  EITIEANP +V +     ++++G+NR+SLGV
Sbjct: 61  GGTPSLAKPAEIDRLLAAIPK----ENVKEITIEANPRTVTLQKAVQWKESGINRVSLGV 116

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           QSL+E+ L  LGR H   + + + +  R      ++ D I+ +P Q +  ++  L R L 
Sbjct: 117 QSLDEKELLILGRRHKPKDVVDSANALRKGGIENINLDFIFGIPTQGVESFKRSLYRGLE 176

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  H+SLY L+ E+GT F++  K G   +P E   +++  +   + + HG   YE+SN 
Sbjct: 177 LSPKHISLYCLSYEEGTPFFEEMKKGR-FVPDEKKEIEMMEMACELLADHGFVRYEVSNF 235

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G +SLHN  YW+  DY+GIGP A S V         S       +++ +++    + 
Sbjct: 236 ALPGYQSLHNKAYWQGKDYLGIGPSACSTVGNKR----WSNLNDYIQYVQELQEGRLPIK 291

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
             E L  E +  E L + LR  EGI++        R ++   E  L   G+I+    +R 
Sbjct: 292 TMESLDEELKKKERLFLALRTDEGITLGQEGEKEKRTVEWLVEEGL---GYIKE---NRF 345

Query: 377 RCTQRGMTMLDSV 389
             T RG  + D +
Sbjct: 346 ILTNRGFLLADEI 358


>gi|52424283|ref|YP_087420.1| coproporphyrinogen III oxidase [Mannheimia succiniciproducens
           MBEL55E]
 gi|52306335|gb|AAU36835.1| HemN protein [Mannheimia succiniciproducens MBEL55E]
          Length = 460

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 87/405 (21%), Positives = 169/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             ++          L +YVH PFC K C +C  N  + R++   + ++     E++   +
Sbjct: 42  EDFKAAAARYPGRPLSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDYLEQEIKHRAE 101

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   RS++ I +GGGTP+ +     A ++  +  +++++ + EI+IE +P  +E++    
Sbjct: 102 LFKTRSVTQIHWGGGTPTYLSEAQSARLMTMLRNHFSIADSAEISIEMDPREIELSMLDH 161

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            RK G NRIS+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q 
Sbjct: 162 LRKIGFNRISMGVQDFNKDVQKAVNREQDEEFIKALLVHARELGFRSTNLDLIYGLPLQN 221

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   LQ+ +    D LS++       + F    K  D +LP+    + +   T    
Sbjct: 222 VESFMFTLQKVIELNPDRLSVFNYAHLP-SRFAGQAKIKDHMLPAPETKLTILQKTIETL 280

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
            A G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 281 GAAGYKFIGMDHFAKPDDELAIAQQNGILHRNFQGYTTQEECDLLGLGVSAISLLGDTYA 340

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V   G A+ +   LS E      ++  L     ++ +  E    
Sbjct: 341 QN----QKELKRYYADVDATGIALHKGLVLSKEDCLRRDVIKQLICNFKLNYELIEKQYN 396

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L   G +E +  + ++ + RG  ++ ++ 
Sbjct: 397 IDFKTHFTEDLALLAPLAEDGLVE-ITNTAIQVSARGRLLIRNIC 440


>gi|241664735|ref|YP_002983095.1| coproporphyrinogen III oxidase [Ralstonia pickettii 12D]
 gi|240866762|gb|ACS64423.1| oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           pickettii 12D]
          Length = 494

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 164/406 (40%), Gaps = 28/406 (6%)

Query: 2   KYLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            YL A         +    L +Y+H PFC   C YC  N  + + +     ++++   EM
Sbjct: 57  DYLDALHRRAAIAPALHAPLSLYMHLPFCANLCYYCGCNKVITKDRSRSARYVETLAREM 116

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
             +    GP R ++ + +GGGTP+ +    +  ++    +++ V+++ EI++E +P   +
Sbjct: 117 AMVASQIGPLRRVTQLHWGGGTPTFLAHDEMRAVMAATREHFDVANDGEISVELDPRHAD 176

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +   + G NR SLG+Q  +    R + R  +  E    +  AR +    +SFDLIY
Sbjct: 177 DATLEVLAEIGFNRASLGIQDFDPDVQRAVHRIQSVEETRRVVDTARRLGLESISFDLIY 236

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q    +   L R L  A D LS+Y        LF    +     LP+ +  +DL  
Sbjct: 237 GLPYQRTETFNATLDRVLEMAPDRLSVYSYAHLPH-LFKAQRRIDMFTLPTADEKLDLLA 295

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
           +T     A G     + + +           E     N+  Y      D +  G  A SR
Sbjct: 296 MTVERLVAEGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDMLAFGVSAISR 355

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V      V    EK  +++   +     AV+    L+ +      L+  L     ++++ 
Sbjct: 356 VGD----VYAQNEKDLDAYYARIDAGELAVLRGMSLTPDDHVRRALIGELMCGFELNMRA 411

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +    G +       +++    L+  G + +V   R+  T +G  +
Sbjct: 412 FGARHGLDFKRSFADELQALAPLEEAGLV-KVGDERIVITPQGRLL 456


>gi|160885179|ref|ZP_02066182.1| hypothetical protein BACOVA_03177 [Bacteroides ovatus ATCC 8483]
 gi|156109529|gb|EDO11274.1| hypothetical protein BACOVA_03177 [Bacteroides ovatus ATCC 8483]
          Length = 335

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 103/338 (30%), Positives = 175/338 (51%), Gaps = 10/338 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++      I +I+FGGGTPS +E ++   I D I +++ ++   EIT+EANP  +   
Sbjct: 1   MRKEYLKGEDIETIYFGGGTPSQLEKEDFEQIFDTIREHYGLNHCQEITLEANPDDLSQE 60

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +       NR+S+G+Q+ ++ +L+ L R HNA  AI AI   R   F  +S DLIY L
Sbjct: 61  YLEMLSSLPFNRLSMGIQTFDDATLKLLRRRHNARTAIEAIDRCRKADFQNISIDLIYGL 120

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T  +WE +L++A+S  V+H+S Y L  E+ T  Y M K   +    E+ +++ + L 
Sbjct: 121 PGETKERWENDLRQAISLNVEHISAYHLIYEEDTPIYNMLKQHQISEVDEDSSLEFFTLL 180

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G   YEISN    G  S HN +YW+   Y+G GP AHS   +       SI  
Sbjct: 181 IEHLQKAGFEHYEISNFCRPGKYSHHNTSYWKGIAYLGCGPSAHSFDGMTREWNVSSI-- 238

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             ++++K + +   A  E E+L+   + +EF++  +R   G  ++  + + G  +   C+
Sbjct: 239 --DTYIKGIEEGCRA-FETEYLNPTIRYNEFIITTIRTVWGTPIEKLKQMFGNEMWKYCQ 295

Query: 360 RNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +      + G +E      LR T+ G+ + DS++++L 
Sbjct: 296 KMAAPYLKNGKLEEY-NGALRLTREGIFISDSIMSDLL 332


>gi|197120672|ref|YP_002132623.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. K]
 gi|196170521|gb|ACG71494.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. K]
          Length = 379

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 181/384 (47%), Gaps = 12/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   GVYVH+P+C  +CPYCDF +       G   + ++   E+          S+ S++
Sbjct: 2   ARPFGVYVHYPYCTHRCPYCDF-AVTTERPPGAGRYARAVRAELGLRAPAFEGLSLRSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +   I  +L  +   + ++ + E+T+E NP S +    + +R AGVNRIS+
Sbjct: 61  LGGGTPSLWDADEIGDVLAAVRDRFGLAEDAEVTLEVNPESSDPARLEAWRAAGVNRISV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +   L  LGR H    A  AI  A      +S DLIY   + ++     + +RA+
Sbjct: 121 GVQSFDPGVLAKLGRRHGPERAERAIREAAAALGNVSVDLIYGARRSSVETARRDAERAV 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                H+S Y LT++   +       +M ++G L LPS+  A+      ++     GL  
Sbjct: 181 EAGAVHVSAYALTLDPDVMAEEVPLARMRREGRLPLPSDEDALAQAAALRAALRRLGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES+HN  YWR+  Y+G+G GA+   +  +  V     +   +WL  V  
Sbjct: 241 YEISNFARPGRESVHNGLYWRHESYLGLGAGAYGCRRGEAGSVRYGNLRDAGAWLAAVEA 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                 E++ + +    +E LM+ LR R+G  +                 +L R     R
Sbjct: 301 GRLPTAEEDRIDARADRNERLMLALRTRDGAPLAALG-----PAQAREAADLVRHRLAVR 355

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
              + L  T+RG+ +  ++   L 
Sbjct: 356 RDGA-LVLTRRGLDLHSAISERLF 378


>gi|89074470|ref|ZP_01160947.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
 gi|89049758|gb|EAR55308.1| coproporphyrinogen III oxidase [Photobacterium sp. SKA34]
          Length = 457

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 81/404 (20%), Positives = 164/404 (40%), Gaps = 23/404 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E +        L +Y+H PFC K C YC  N  + R++   ++++     E++    
Sbjct: 39  AEFEMSCKQYPDRKLSLYIHIPFCHKLCYYCGCNKIITRHQHKADDYLDKLEQEIKQRAT 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L G R +S + +GGGTP+ +    I+ +++ +   +    + EI+IE +P  +E++    
Sbjct: 99  LLGDRQVSQLHWGGGTPTFLTAAQISRLMNSLRAVFNFDDDAEISIEVDPREIELDILDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q 
Sbjct: 159 LRSEGFNRLSIGVQDFNKDVQKLVNREQDEVFIFAMVERARELGFRSTNLDLIYGLPLQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ L      LS++        LF    K  + +LPS    + +   T +  
Sbjct: 219 REMFAKTLEQVLEMNPGRLSVFNYAHMPK-LFAAQRKISEALLPSAKEKLGILQNTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFAKPDDELAIAQREGILHRNFQGYTTQGECDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + + +  +A+ +   L ++      ++  L     +  K  E    
Sbjct: 338 QN----QKELKHYYRDIEEKQNALCKGVSLDADDLLRREVIKALICNFQLDKKAIEAEFN 393

Query: 352 RNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
            N D     +L+         +  V    +    +G  ++ ++ 
Sbjct: 394 INFDQYFAEDLELLKTFIDDELVSVDEQHIFVELKGRLLIRNIC 437


>gi|321478940|gb|EFX89896.1| hypothetical protein DAPPUDRAFT_299799 [Daphnia pulex]
          Length = 429

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 135/410 (32%), Positives = 218/410 (53%), Gaps = 17/410 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY----KVGQENFIQSFLT 57
           K+ S    ++         +Y HWPFC   C +C FN + +      K+  E   +  + 
Sbjct: 6   KFFSPCSTDILENLKTEATMYFHWPFCKNICTFCSFNKYKKVENSFSKIIDERMEKCLIK 65

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           E + +   TG + I+SI+FGGGTPSL     I+ I++ + +   V    EITIE NPSS+
Sbjct: 66  ETETILGFTGIKKINSIYFGGGTPSLAPTTTISRIINCVKQLTNVDEQAEITIECNPSSL 125

Query: 118 EVNN-FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
            +    + Y K G+NR+S+GVQSL++ +L+ LGR+H+A++++  +  A ++F    +S D
Sbjct: 126 SMTKTLEEYFKFGINRVSVGVQSLDDGTLKVLGRDHSANDSVMLLKSALDVFGSDAVSVD 185

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L++  P  T+  W+ EL   LSY   H+SLY+LT E+GT  ++  + G +VLP+E+ A  
Sbjct: 186 LLFRKPGDTIQSWKNELNEILSYKPHHISLYELTPERGTPLFRQLQSGTVVLPNEDDAAS 245

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLG--AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
           +Y L   +   +G   YEISN +  G  A+S HN++YW    Y+GIGPGAHSR       
Sbjct: 246 MYILALELLKEYGFERYEISNFARAGSCAQSSHNMSYWNGTQYVGIGPGAHSRFFPLGAN 305

Query: 293 VAISIEK--HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---- 346
              S  +   P+SW  +V +NGHA       S      E +   LR  +GI  K W    
Sbjct: 306 SRESRVQALDPKSWQDLVERNGHATRLCRQQSQIDVLSELVATSLRTTKGIQPKRWLIFQ 365

Query: 347 EMLAGRNLDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +  ++  +    + L   G ++      L+ T++G+ ++DS++ N+ 
Sbjct: 366 PEYSLVDVFEQAPSIQMLFLSGNLQWSVDGSLQATEKGLNVVDSILPNIL 415


>gi|159491038|ref|XP_001703480.1| hypothetical protein CHLREDRAFT_99520 [Chlamydomonas reinhardtii]
 gi|158280404|gb|EDP06162.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 401

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/403 (26%), Positives = 185/403 (45%), Gaps = 29/403 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             Y+H PFC +KC YCDF    V R      +   + +  T     +     +    +  
Sbjct: 1   SAYIHLPFCKRKCFYCDFPVEAVGRDPTAPTKGERVDTVCTRCASKQSAPYRKRCRWVCE 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              TPSL+ P+ +A IL+ +   + +++  E+++EA+P + ++   + YR+ GV+R+S+G
Sbjct: 61  RRHTPSLLPPELLARILEALDARFGIAAGAEVSLEADPGTFDLARLREYRRLGVSRLSVG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+ +++ L   GR H+  EA AAI   R       S DLI  LP  T   W   LQRA+
Sbjct: 121 VQAFQQELLTACGRGHDLLEAEAAIEAVRAAGLASWSLDLISGLPGLTPDMWAASLQRAV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   DH+S+Y L +E+GT F +  + G L LP++  AV++Y     + +A G   YE+SN
Sbjct: 181 AAGPDHVSVYDLQVEEGTPFERWQRAGRLRLPADEAAVEMYGKASQVLTAAGFEHYEVSN 240

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G    HN  YW    Y   G GA S ++         ++ + + W++ +  +    
Sbjct: 241 YAKPGHRCAHNQVYWSGLPYYAFGLGAASYLQGRRFSRPARMQPYLQ-WVQQLADSEQGR 299

Query: 316 VEKEFLSSEQQADE-------FLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ----- 363
              E L  +   +E        LM+ LR  +G+ +       G        R L+     
Sbjct: 300 A-GEALPGDHLPEESQELLLDSLMLALRTADGVDLGRLRRRHGAAAVGVVLRALRPHEQV 358

Query: 364 ---------RQGFIERVQFS-RLRCT-QRGMTMLDSVIANLAV 395
                     +G  E    + R+R +   G  + + VI+++  
Sbjct: 359 RPWGACCALAEGQPEDATGAVRVRLSDPDGFLLSNDVISDVFA 401


>gi|332288573|ref|YP_004419425.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
 gi|330431469|gb|AEC16528.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
          Length = 455

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 89/414 (21%), Positives = 171/414 (41%), Gaps = 30/414 (7%)

Query: 1   MKYLSAYENN-----MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           +++   Y N+          +  L +YVH PFC K C +C  N  + R++   + ++   
Sbjct: 28  LEFNEVYNNDDFIMAAERYPTRPLSLYVHIPFCHKLCYFCACNKVITRHQHKADIYLDYL 87

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             E++    L   R+++ I +GGGTP+ +  +    ++  +  ++T+S N EI+IE +P 
Sbjct: 88  EKEIRTRSALFSKRTVTQIHWGGGTPTYLTEEQSDRLMSMLRSHFTISENAEISIEMDPR 147

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFD 174
            +E++     RK G NRIS+GVQ   ++  + + R  +       +H AR   F   + D
Sbjct: 148 EIELSMLDHLRKIGFNRISMGVQDFNKEVQKAINREQDEQFIFDLMHHARELGFQSTNLD 207

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           LIY LP QT+  +   LQ+ L    D LS++       T F    K    +LPS    + 
Sbjct: 208 LIYGLPLQTLDSFMFTLQKVLELNPDRLSIFNYAHLP-TRFAGQRKIKQEMLPSPETKLS 266

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGA 282
           +   T    ++ G     + + +    E        + + N+  Y      D +G+G  A
Sbjct: 267 ILQNTIEFLTSSGYKFIGMDHFAKPDDELAIAQANGVLHRNFQGYTTQEECDLLGMGVSA 326

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
            S +     +     +K  +S+   +   G A+ +   ++ E      ++  L     + 
Sbjct: 327 ISLLGDTYAQN----QKELKSYYADIETRGIALNKGLVMTREDCLRRDVIKALICNFKLK 382

Query: 343 VKDWEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               E     N       D+     L   G +  +    +  + +G  ++ ++ 
Sbjct: 383 FAVIEQQYQINFKQHFTEDLALLAPLVEDGLLS-IDDEGITVSSKGRLLIRNIC 435


>gi|299065230|emb|CBJ36396.1| Coproporphyrinogen III oxidase [Ralstonia solanacearum CMR15]
          Length = 488

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 157/405 (38%), Gaps = 28/405 (6%)

Query: 3   YLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A         +    L +YVH PFC   C YC  N  V +       +I +   EM 
Sbjct: 58  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIGALAREMA 117

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +    GP R  + + +GGGTP+ +    +  ++    +++ ++S+ EI++E +P     
Sbjct: 118 MVAGHIGPLRQATQLHWGGGTPTFLSHDEMRDVMAATREHFALTSDAEISVELDPRHASD 177

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
              +     G NR SLG+Q  +    R + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 178 ATLEVLASLGFNRASLGIQDFDADVQRAIHRVQSVEQTRQVVDSARRLGFESISFDLIYG 237

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q    +   L R L  A D LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 238 LPHQHTATFNATLDRVLEMAPDRLSVYSYAHLPH-LFKPQRRIDALALPSADEKLDLLAM 296

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 297 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGMSAISRV 356

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + ++ +
Sbjct: 357 GD----VYAQNEKELDAYYARIDAGELPVLRGMTLTPDDHVRRALIGELMCGFELDMRLF 412

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
               G N       ++     L+  G + +V   R+  T +G  +
Sbjct: 413 GARHGLNFRQSFAGELTALAPLEDAGLV-KVGDERIVITPQGRLL 456


>gi|149191761|ref|ZP_01870000.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148834403|gb|EDL51401.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 470

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/407 (21%), Positives = 158/407 (38%), Gaps = 27/407 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +S Y+   T      L +YVH PFC K C YC  N  + R+    + ++     E++   
Sbjct: 51  ISDYDMACTQYPERPLSLYVHIPFCHKLCYYCGCNKVITRHAHKADEYLDVIEHEIRQRA 110

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +      EI+IE +P  +E++   
Sbjct: 111 SLLQGRKVTQLHFGGGTPTFLTKSQISRLMAILRGEFFFQEGAEISIEVDPREIELDMLD 170

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  +     A    A+   F   + DLIY LPKQ
Sbjct: 171 HLRSEGFNRLSIGVQDFNKEVQKLVNREQDEEFIFAMAERAKQLGFRSTNLDLIYGLPKQ 230

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  ++   L++ L+     LS++        LF    K  D  LP     + +   T + 
Sbjct: 231 TKQRFAETLEQVLTMRPGRLSVFNYAHMPN-LFAAQRKIKDEDLPQAEEKMAILQDTIAT 289

Query: 243 TSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVG 289
            +  G     + + +    E         LH  N+  Y      D +G G  A S +   
Sbjct: 290 LTGAGYQFIGMDHFALPEDELAVAQRAGELHR-NFQGYTTQGDCDLVGFGVSAISMIGDS 348

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +     +K  + +   V    HA+ +   L  +      ++  L     +     E  
Sbjct: 349 YAQN----QKELKKYYAQVNDLRHALWKGVVLDKDDLIRREVIKQLICNFKLDKTFIEKT 404

Query: 350 AGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            G         D++  +       +     S +  T RG  ++ ++ 
Sbjct: 405 FGIGFSSYFAEDMKLLQTFIDDELVAVSDDS-IEVTLRGRLLIRNIC 450


>gi|126640474|ref|YP_001083458.1| putative oxidase; putative coproporphyrinogen III oxidase
           [Acinetobacter baumannii ATCC 17978]
          Length = 324

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 14/334 (4%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   RSI S+F GGGTPSLI  +    + + +        + EIT+EANP ++E + F G
Sbjct: 1   MAQGRSIHSVFIGGGTPSLISAKGYVWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAG 60

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
           Y +AG+NR+S+GVQ+     L+ LGR H+A+ A+ AI  AR   F R++ DL++ LP+QT
Sbjct: 61  YLEAGINRLSIGVQTFNTDHLQKLGRIHSANNAMDAIEQARRAGFKRVNVDLMHGLPEQT 120

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + Q   +L+ A+ +   H+S YQLTIE  T+F++       VLP + V  D+    ++  
Sbjct: 121 LEQALYDLKTAVEHGATHISWYQLTIEPNTVFFR----TQPVLPQDEVLEDIQEQGEAYL 176

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            A+G   YE+S        S+HNLNYW++GDY+ IG GAH +V            + P+ 
Sbjct: 177 KANGFINYEVSAWRKE-QPSVHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKD 235

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +L  V      + + E   +++   EF+M  LRL +G+  + +E   G +LD   +    
Sbjct: 236 YLAKVPAEHLQMKKIE---ADELPFEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTS 292

Query: 364 ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              R+  +E     RL CT++G   L+SV+    
Sbjct: 293 LRSRELLVE--DSGRLACTEQGHIFLNSVLEEFL 324


>gi|226227306|ref|YP_002761412.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
 gi|226090497|dbj|BAH38942.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
          Length = 400

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/392 (28%), Positives = 180/392 (45%), Gaps = 36/392 (9%)

Query: 26  PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           PFC ++C YCDF S   R +V  + ++     E+   R    P  + +++FGGGTPS + 
Sbjct: 18  PFCARRCSYCDF-SIAVRREVPWQEYVNGIRAELALQRPAGKPV-LRTLYFGGGTPSRLG 75

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  +L  + +++    + E+T+EANP  + V++ + +R AG+NR+S+GVQS  +  L
Sbjct: 76  VDGVCALLALMREHFLWDESAEVTLEANPEDISVDSVRAWRIAGINRLSIGVQSFHDDVL 135

Query: 146 RFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           R++ R H+A  A  A+  AR+      S DLI+A P      W  +L++A++   DH+SL
Sbjct: 136 RWMHRVHDADAAKRAVGAARDGGIVDHSIDLIFATPDGVHRSWTDDLEQAIALGADHVSL 195

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           Y LT+E  T   + +  G +    E      +        A G   YE+SN++  G  + 
Sbjct: 196 YGLTVEPHTPLGRWNARGAVAEAEEERYEREFLEAHHRLGAAGYEHYEVSNYARPGRRAR 255

Query: 265 HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
           HN  YWR   Y+G+GP AH              E    +WL+ V +    V   E L+ E
Sbjct: 256 HNSAYWRGVPYLGLGPSAHGFDGTQRRWN----EPAYAAWLRQVTEGRDPVAGAEVLTDE 311

Query: 325 QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF-----IERVQF------ 373
            +  E + +GLR  +G+ +   E +                G+     +E          
Sbjct: 312 NRIAESVYLGLRTVDGLPLSVAETMH--------VARWIDAGWATIQSVEATSHPSPHVG 363

Query: 374 ----------SRLRCTQRGMTMLDSVIANLAV 395
                      RL CT  G   LD++ A+L  
Sbjct: 364 DGNAPYAQAAQRLTCTPMGWLRLDALAADLTA 395


>gi|238921707|ref|YP_002935222.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238871276|gb|ACR70987.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Edwardsiella ictaluri 93-146]
          Length = 457

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 171/406 (42%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +      +L +YVH PFC K C +C  N  V R     + ++     E+     
Sbjct: 39  AAFLRAVARYPERALSLYVHIPFCHKLCYFCGCNKIVTRQSHKADEYLDKLALEIAARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +    I+ ++  + +++T +   EI+IE +P  + ++    
Sbjct: 99  LFAGRTVSQLHWGGGTPTFLNKAQISRLMMLLRRHFTFAPQAEISIEIDPREIALDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NR+S+GVQ   +     + R  + +   + +H AR I F   + DLIY LP+QT
Sbjct: 159 LRQEGFNRLSMGVQDFNKTVQTLVNREQDEAFIFSLLHHAREIGFTSTNIDLIYGLPRQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ +    D LS++        LF    K  D  LPS +  + +   + +  
Sbjct: 219 PESFGFTLQKVIELNPDRLSIFNYAHMPK-LFAAQRKIKDADLPSADHKLAILQQSIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           ++ G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TSVGYQFIGMDHFAHRDDELAVAQRAGKLHR-NFQGYTTQGDSDLLGLGVSAISMIGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   V   G+A+     +S +      ++ GL     +     E   
Sbjct: 337 AQNR----KVLKEYYAAVEAQGNALWRGLAMSRDDCIRRDVIKGLICNFRLDFAPIEQQY 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D+   R L + G +E  + + +  T RG  ++ ++ 
Sbjct: 393 GIRFVDYFVEDLVLLRPLAQDGLVELGE-TAINVTPRGRLLIRNIC 437


>gi|311267550|ref|XP_003131622.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Sus scrofa]
          Length = 442

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 140/397 (35%), Positives = 219/397 (55%), Gaps = 19/397 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              GS    +YVHWP+C K+C YC+FN ++ R  V +    +  +TE Q + +L+G + +
Sbjct: 33  PAPGSQRAALYVHWPYCEKRCSYCNFNKYIPRG-VDEAAMRRCLVTEAQTLLRLSGVQRV 91

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTPSL  P+ +A +L+ +A+   +  + E+T+EANP+S   +    +R AGVN
Sbjct: 92  ESVFFGGGTPSLASPRTVAAVLEAVAQATHLPVDSEVTLEANPTSAPGSRLAAFRAAGVN 151

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+S+G+QSL++  L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +
Sbjct: 152 RLSIGLQSLDDAELQLLGRTHSASDALRTLAEARRLFPGRVSVDLLLGLPAQQVGPWLRQ 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ  L    DH+SLYQLT+E+GT  +   + G L  P   +A ++Y   +++    G   
Sbjct: 212 LQELLRRCDDHVSLYQLTLERGTALFAQVQQGALPAPDPELAAEMYQQGRAVLREAGFRQ 271

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLK 306
           YE+SN +  GA S HN  YW+ G Y+G+GPGAH R       G  R A      P++W+K
Sbjct: 272 YEVSNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFIPQGAGGHTREARIQTLEPDNWMK 331

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIE 357
            V   GH    +  L   +  +E L MGLR   G++ + W+            G + +++
Sbjct: 332 EVMLFGHGTRRRIRLGELELLEEVLAMGLRTDVGLTHQHWQQFEHQLTLWDVFGASEEVK 391

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                        +    LRC+  G+ +LDS++  L 
Sbjct: 392 VLLEQCL----LLLDHRGLRCSWEGLAVLDSLLPILL 424


>gi|190150287|ref|YP_001968812.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307263628|ref|ZP_07545239.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915418|gb|ACE61670.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871005|gb|EFN02738.1| Oxygen-independent coproporphyrinogen-III oxidase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 455

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 167/404 (41%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A++       +  L +Y H PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 38  AFKAAAARYPNRPLSLYAHIPFCHKLCYFCACNKIITRHRHKVDIYLDYLEKEIKTRAPL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ I +GGGTP+ ++    A ++  + +++ VS+  EI+IE +P  +E+N     
Sbjct: 98  FTNRVVTQIHWGGGTPTYLDEAQSARLMSMLRQHFNVSAEAEISIEMDPREIELNMLDHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ +
Sbjct: 158 KSIGFNRISMGIQDFNKEVQKLVNREQDEEFIFALMKRAKALGFTSTNIDLIYGLPKQNV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R +    D +S++       + F    K  D +LP+    + +   T     
Sbjct: 218 ESFMYTLERVIELNPDRMSVFNYAHLP-SRFAAQIKIKDDMLPAPETKLTILQKTIEFLG 276

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            +G     + + +           + + + N+  Y      D +G+G  A S +     +
Sbjct: 277 GNGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGMGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  + +   V + G A+ +   L+ +      ++  L     +     +     
Sbjct: 337 NH----KELQQYYANVEERGIALHKGLALTQDDCIRRDVIKALICNFKLEFDRLQAEYQI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +       D+     L + G +E  +   +  + RG  ++ ++ 
Sbjct: 393 DFKQYFAEDLALLEPLAKDGLLEINENG-IVVSPRGHLLIRNIC 435


>gi|114778280|ref|ZP_01453139.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Mariprofundus ferrooxydans PV-1]
 gi|114551382|gb|EAU53938.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Mariprofundus ferrooxydans PV-1]
          Length = 359

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 123/360 (34%), Positives = 189/360 (52%), Gaps = 10/360 (2%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW 100
           R +   + + Q+ L E+    +      R+++SIFFGGGTPSL  P  IA ++    + +
Sbjct: 2   RDEPPWQAYQQALLAELTHWSEHAPFAGRTLASIFFGGGTPSLAPPALIAAVISAAEELF 61

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
            ++S+ EIT+EANP S E + F  YR+AG+NR+S+GVQSL+   LR+L R H   EA AA
Sbjct: 62  GLTSSCEITLEANPGSAEADRFLAYRQAGINRLSIGVQSLDAAKLRWLERIHGPEEATAA 121

Query: 161 IHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            H+AR   F  ++ DL++ LP+Q +  W   L+R +  A +HLS YQLT+E  T     H
Sbjct: 122 FHMARRAGFDNINLDLMFGLPEQDLDHWLTTLRRVVELAPEHLSCYQLTVEAHTALAVRH 181

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIG 279
                 LP + +A+ +   T+   +  G  AYE+SN S    +  HN  YW+Y DYIGIG
Sbjct: 182 AQEPYPLPDDELALAMLFATREQLAHAGYQAYEVSNFSRPDLKCRHNDGYWQYDDYIGIG 241

Query: 280 PGAHSRVKVGS-HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
            GA  +           S  + PE +++    NG A+  +E L   Q A E   + LR  
Sbjct: 242 AGAAGKWDEPDLGVTRYSNTRAPERYIETATTNGCAINSRESLDHLQAAGEACWLALRRT 301

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIER----VQFSRLRCTQRGMTMLDSVIANLA 394
           +GI    ++   G +       NL  Q +++R    V    +  T  G+ + D++ A++ 
Sbjct: 302 QGIDRAAFKQRFGTDAFDLFAANL--QPWLDREMLKVTEQSIFLTPAGLPLADTIAASVL 359


>gi|261492500|ref|ZP_05989054.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261311863|gb|EEY13012.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 455

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 85/405 (20%), Positives = 163/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +           L +YVH PFC K C +C  N  + R++   E ++     E++    
Sbjct: 37  EDFIRAAARYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ I +GGGTP+ ++    A ++  +  N+ VS + EI+IE +P  +E++    
Sbjct: 97  LFQNRLVTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+G+Q  +++  R + R  +     A +  A+   F   + DLIY LPKQ 
Sbjct: 157 LRAIGFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   LQR +    D +S++       + F    K  + +LP+    + +   +    
Sbjct: 217 VESFMYTLQRVVELNPDRMSVFNYAHLP-SRFAAQVKIKEELLPAPETKLTILQNSIEFL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             +G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GKNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + +   V  NG A+ +   LS +      ++  L     +     E   G
Sbjct: 336 QNR----KELQQYYADVETNGIALHKGIALSQDDCIRRDVIKALICNFKLDFATIEKQYG 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L     +     S +  + RG  ++ ++ 
Sbjct: 392 IDFKRYFAEDLAFLAPLAEDELLTMNDDS-IVVSPRGRLLIRNIC 435


>gi|254360730|ref|ZP_04976878.1| coproporphyrinogen oxidase [Mannheimia haemolytica PHL213]
 gi|153091300|gb|EDN73274.1| coproporphyrinogen oxidase [Mannheimia haemolytica PHL213]
          Length = 455

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 163/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +           L +YVH PFC K C +C  N  + R++   E ++     E++    
Sbjct: 37  EDFIRAAARYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ I +GGGTP+ ++    A ++  +  N+ VS + EI+IE +P  +E++    
Sbjct: 97  LFQNRLVTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+G+Q  +++  R + R  +     A +  A+   F   + DLIY LPKQ 
Sbjct: 157 LRAIGFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L+R +    D +S++       + F    K  + +LP+    + +   +    
Sbjct: 217 VESFMYTLKRVVELNPDRMSVFNYAHLP-SRFAAQVKIKEELLPAPETKLTILQNSIEFL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             +G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GKNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + +   V  NG A+ +   L+ +      ++  L     +     E   G
Sbjct: 336 QNR----KELQQYYADVETNGIALHKGIALTQDDCIRRDVIKALICNFKLDFATIEKQYG 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L     +     S +  + RG  ++ ++ 
Sbjct: 392 IDFKRYFAEDLAFLAPLAEDELLTMNDDS-IVVSPRGRLLIRNIC 435


>gi|121604176|ref|YP_981505.1| coproporphyrinogen III oxidase [Polaromonas naphthalenivorans CJ2]
 gi|120593145|gb|ABM36584.1| oxygen-independent coproporphyrinogen III oxidase [Polaromonas
           naphthalenivorans CJ2]
          Length = 463

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 155/406 (38%), Gaps = 32/406 (7%)

Query: 5   SAYENNMTGQ----GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++Y++++  +    G+  L +YVH PFC   C +C  N  + +       +++    EM 
Sbjct: 41  ASYQDHLAQRAGKPGNPPLSIYVHLPFCESLCYFCACNKIITKEHGRVAEYLRYLDKEMA 100

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +    GP R    +  GGGTP+      +  ++  + +++  + + E+ +E +P +V  
Sbjct: 101 LVAAQIGPDRKAVQLHLGGGTPTFFNADELGQLMAMLRRHFDFTPDAELGVEIDPRTVGE 160

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                    G NR S GVQ  +    + + R         A+  +R   F  ++ DLIY 
Sbjct: 161 GTLAMLAGLGFNRNSFGVQDFDPAVQQAVNRIQPLEMVEKAVEESRKANFQSINADLIYG 220

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP+QT+  +   L   +  A D ++LY         F       +  LPS    + ++ +
Sbjct: 221 LPRQTLESFGRTLDSLIRVAPDRIALYNYAHLPR-RFKAQRLIVEADLPSAEERLQIFLM 279

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
           +       G     + + S    E        SLH  N+  Y      D +G G  A S+
Sbjct: 280 SMQRLLDAGYVYIGLDHFSKPDDELNKARLNKSLHR-NFQGYTTRAECDLVGFGVSAISK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +   ++     ++ + + +    + +   LS +      ++M L     + +  
Sbjct: 339 VGNSYSQSVRTVN----AYYEHLDQGHLPIEKGFELSQDDVLRREIIMTLMCSAPVDIAA 394

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTM 385
                G + +      L      +  G I  +    +R T +G   
Sbjct: 395 INQGYGIDFNRYFAHELSLLKQYEEAGLIT-IDPQAIRVTPKGRLF 439


>gi|261210176|ref|ZP_05924473.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC341]
 gi|260840716|gb|EEX67265.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio sp.
           RC341]
          Length = 462

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R ++ + FGGGTP+ +    I+ ++  +   +  + + EI+IE +P  +++    
Sbjct: 103 SLLTGRDVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFTDDAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +     A +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFALVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  D  LP+    + +   T + 
Sbjct: 223 TAETFAQTLQQVLTMKPGRLSVFNYAHMPQ-LFAAQRKIKDADLPAAEEKLAILQQTITT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAVAQRNGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +       +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDELVT-VDERMIEVTLRGRLLIRNIC 442


>gi|313680477|ref|YP_004058216.1| coproporphyrinogen III oxidase, anaerobic [Oceanithermus profundus
           DSM 14977]
 gi|313153192|gb|ADR37043.1| coproporphyrinogen III oxidase, anaerobic [Oceanithermus profundus
           DSM 14977]
          Length = 377

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/375 (31%), Positives = 181/375 (48%), Gaps = 25/375 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   CPYCDF+  VRR     E +++    E         P ++++++ GGG
Sbjct: 3   HLYLHVPFCPTICPYCDFH-VVRRGPGLVERYLERLAAE-AAALHAQRPGTLATLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  + +A +   +   W ++   E+T+EANP ++     +  R  GVNR+SLGVQS
Sbjct: 61  TPSYLRDRELARLFAALP--WALAPGAEVTLEANPGTLSPARLERLRTLGVNRLSLGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L  LGR H A  A+ A+  A +   R+S DLI  LP Q       +L+ A +  V
Sbjct: 119 FQDPVLARLGRAHKARGALRAVEEALDAGFRVSVDLILGLPGQ---DVRADLETAAALGV 175

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +E GT F         + P  +     + L +++    GL  YE+SN +  
Sbjct: 176 GHVSAYTLQVEPGTPFA-----LVGLEPDPDREAAAFALARTVLGRAGLARYEVSNFARP 230

Query: 260 GAESLHNLNYWRYGDYIGIGP--GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           G E+ HNL YWR  ++ G+GP   AH     G              W       G     
Sbjct: 231 GEEARHNLAYWRMAEWGGLGPAASAHFYTHAGPGVAERRTNPPLPRWAA-----GEPPA- 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERVQF 373
           +E +   + A E LMMGLRLREG+ +      +G      +       L+ +G +ER + 
Sbjct: 285 RETIGPLEHAKEGLMMGLRLREGVDLAALARRSGLADLERVLAPAIERLEAEGLLERTE- 343

Query: 374 SRLRCTQRGMTMLDS 388
           S+LR ++ G+  L +
Sbjct: 344 SQLRPSEAGLDRLHA 358


>gi|327399062|ref|YP_004339931.1| oxygen-independent coproporphyrinogen III oxidase [Hippea maritima
           DSM 10411]
 gi|327181691|gb|AEA33872.1| oxygen-independent coproporphyrinogen III oxidase [Hippea maritima
           DSM 10411]
          Length = 365

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/378 (29%), Positives = 197/378 (52%), Gaps = 24/378 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y H PFC KKCPYC F S  +R+    + ++ + + E+   R     +++ +++FGGGTP
Sbjct: 7   YFHIPFCYKKCPYCSFVSFEKRFNE-IDGYVDAVIREI---RGFNSDKTVKTVYFGGGTP 62

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           S+++   I  +L+ + K +    + EIT E  P  ++ N  +G +  G+NR+S+GVQS  
Sbjct: 63  SILKLNQIERVLNEVYKRFRCDID-EITFETIP-LLKGNYLKGLKSLGINRLSIGVQSFN 120

Query: 142 EQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++ L+ LGR HN  E+++A+  A    F  +S DLIY +  +T+ +   +L       + 
Sbjct: 121 DRKLKILGRIHNKKESLSAVEKALAVGFRNISVDLIYGV-GETLDELMYDLDITCKLDIK 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S+Y L+IE+G+ F+KM         +E    + Y     + S +G   YEISN S  G
Sbjct: 180 HVSIYMLSIEEGSEFFKMGFKSS----NEEDIEEFYLKLCEVLSKNGFEQYEISNFSKKG 235

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HN  YW   DY G G  A S +     + + ++ +  ++ L      G  +VE+E 
Sbjct: 236 FRSKHNNAYWLGYDYKGFGVSASSFLSGKRIKNSSNLYEFVKNPL------GSYIVEEE- 288

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRLR 377
           L   + A E  ++GLRL+EGI +K ++   G +++           + GF+++ +  RL 
Sbjct: 289 LEGIELAKEMFILGLRLKEGIDLKVFKDRYGVDVESLFKYEIDKFIKSGFLKK-ENGRLF 347

Query: 378 C-TQRGMTMLDSVIANLA 394
             + R M + +++ +   
Sbjct: 348 LSSPRAMLVSNAIFSEFI 365


>gi|332283879|ref|YP_004415790.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
 gi|330427832|gb|AEC19166.1| coproporphyrinogen III oxidase [Pusillimonas sp. T7-7]
          Length = 473

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 155/409 (37%), Gaps = 28/409 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL           +  L VYVH PFC   C +C  N  + +       +++    EM+ 
Sbjct: 52  DYLGYLAQRANAANNPLLSVYVHLPFCESLCYFCACNKIITQDHGRSAEYLRYLDKEMEL 111

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R    +  GGGTP+ +    +  ++D + +++  +S+ E+ +E +P +V   
Sbjct: 112 VAGSLGSDRKTGQLHLGGGTPTFLSSAELTQLMDSLRRHFEFTSDAELGVEIDPRTVNDK 171

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G NR S GVQ  +      + R    +   AA++ +R   F  ++ DLIY L
Sbjct: 172 TLNMLSGLGFNRTSFGVQDFDPDVQAAVNRIQPLAMVEAALNASRQAGFESVNIDLIYGL 231

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PKQT+  +   L + L  + D ++LY       + F          LPS    + ++ ++
Sbjct: 232 PKQTLASFNHTLDKVLHLSPDRIALYNYAHLP-SRFKAQRLIKAEDLPSAEERLQIFLMS 290

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 291 IRRLLEAGYVYIGLDHFAKPDDELNKARMDKSLHR-NFQGYTTRAEYDMVGFGVSAIGKV 349

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                R   +  +   ++   + +    +     L+ +      ++M L     +  +  
Sbjct: 350 G----RSYSASVRSLNAYYAHLDEGRLPIERGFELTDDDVLRRQIIMTLMCSMPLDYQAI 405

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               G +       ++E     +  G + +   S L  T +G   + ++
Sbjct: 406 RQEHGIDFASYFQTELERLAQFEEAGLLTKDDNS-LCITPKGRLFVRAI 453


>gi|261496914|ref|ZP_05993282.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307438|gb|EEY08773.1| coproporphyrinogen oxidase [Mannheimia haemolytica serotype A2 str.
           OVINE]
          Length = 455

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 85/405 (20%), Positives = 162/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +           L +YVH PFC K C +C  N  + R++   E ++     E++    
Sbjct: 37  EDFIRAAARYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ I +GGGTP+ ++    A ++  +  N  VS + EI+IE +P  +E++    
Sbjct: 97  LFQNRLVTQIHWGGGTPTYLDEDQSARLMQMLRANLDVSDDAEISIEMDPREIELSMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+G+Q  +++  R + R  +     A +  A+   F   + DLIY LPKQ 
Sbjct: 157 LRAIGFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   LQR +    D +S++       + F    K  + +LP+    + +   +    
Sbjct: 217 VESFMYTLQRVVELNPDRMSVFNYAHLP-SRFAAQVKIKEELLPAPETKLTILQNSIEFL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             +G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GKNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + +   V  NG A+ +   LS +      ++  L     +     E   G
Sbjct: 336 QNR----KELQQYYADVETNGIALHKGIALSQDDCIRRDVIKALICNFKLDFATIEKQYG 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L     +     S +  + RG  ++ ++ 
Sbjct: 392 IDFKRYFAEDLAFLAPLAEDELLTMNDDS-IVVSPRGRLLIRNIC 435


>gi|254226594|ref|ZP_04920175.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V51]
 gi|125620866|gb|EAZ49219.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V51]
          Length = 480

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 161/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V  + +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDETMIEVTLRGRLLIRNIC 460


>gi|197286714|ref|YP_002152586.1| coproporphyrinogen III oxidase [Proteus mirabilis HI4320]
 gi|194684201|emb|CAR45683.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis HI4320]
          Length = 457

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E          L +Y+H PFC K C +C  N  + R+K   + ++     E+    +
Sbjct: 39  ADFEQATKRYPERPLSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R ++ + +GGGTP+ ++ Q I+ ++  + +++    N E++IE +P  +E++    
Sbjct: 99  YFKNRKVTQMHWGGGTPTFLDKQQISRLVALLRQHFHFVENAELSIEIDPREIELDVIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
               G NR+S+GVQ   ++  + + R  + +   + +  AR   F   S DLIY LPKQT
Sbjct: 159 LHNEGFNRLSMGVQDFNKEVQQKVNREQDEAFIFSLVARAREVGFHSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ +  + D LS++        LF    K  D  LP     +++   T +  
Sbjct: 219 KESFAFTLKKVIELSPDRLSVFNYAHLPN-LFAAQRKIKDEDLPLAEEKLEILQETITTL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           + +G     + + +           + + + N+  Y      D +G+G  A S +     
Sbjct: 278 TTNGYQFIGMDHFAKPDDELAVAQRQGILHRNFQGYTTHEECDLLGMGVSAISMLGDHYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  + +   V   GHA+     L+ +      ++  L     ++  + E L  
Sbjct: 338 QN----EKVLKEYYARVNSEGHALWRGLSLTHDDCIRRDVIKTLICNFHLNFTEIENLYQ 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     +   G +E +   +++ T RG  ++ ++ 
Sbjct: 394 LDFQDYFKEDLALLAPMVEDGLVE-ISAEKIQVTPRGRLLIRNIC 437


>gi|90581068|ref|ZP_01236868.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
 gi|90437764|gb|EAS62955.1| coproporphyrinogen III oxidase [Vibrio angustum S14]
          Length = 457

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 81/404 (20%), Positives = 166/404 (41%), Gaps = 23/404 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E          L +Y+H PFC K C YC  N  + R++   ++++     E++    
Sbjct: 39  AEFEMACKQYPDRKLSLYIHIPFCHKLCYYCGCNKIITRHQHKADDYLDKLEQEIKQRAT 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L G R +S + +GGGTP+ +    I+ +++ +   +    + EI+IE +P  +E++    
Sbjct: 99  LLGDRQVSQLHWGGGTPTFLTAAQISRLMNSLRAAFNFDDDAEISIEVDPREIELDILDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +   + + R  + +   A +  AR   F   + DLIY LP Q 
Sbjct: 159 LRSEGFNRLSIGVQDFNKDVQKLVNREQDETFIFAMVERARELGFRSTNLDLIYGLPLQN 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ L+     LS++        LF    K  + +LPS    + +   T +  
Sbjct: 219 REMFAKTLEQVLAMNPGRLSVFNYAHMPK-LFAAQRKISEELLPSAKEKLGILQDTIATL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +A G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TAAGYQFIGMDHFAKPDDELAIAQREGILHRNFQGYTTQGECDLLGMGVSAISMIGDCYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + + + + +  +A+ +   L ++      ++  L     +  K  E    
Sbjct: 338 QN----QKELKHYYRDIEEKQNALWKGVSLDADDLLRREVIKALICNFQLDKKAIEAEFN 393

Query: 352 RNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
            N +     +L+         +  V    +    +G  ++ ++ 
Sbjct: 394 INFEQYFAEDLELLKTFIDDELVSVDEQHIFVELKGRLLIRNIC 437


>gi|269215619|ref|ZP_06159473.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           exigua ATCC 700122]
 gi|269131106|gb|EEZ62181.1| putative oxygen-independent coproporphyrinogen III oxidase [Slackia
           exigua ATCC 700122]
          Length = 371

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/372 (28%), Positives = 189/372 (50%), Gaps = 20/372 (5%)

Query: 20  GVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFC  +C YCDF  S V         +I+  + +++   +     SI +++ GG
Sbjct: 9   ALYIHIPFCAHRCAYCDFATSAVPGDAAEVGEYIERLILDIRRASKAGDLASIETVYIGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  ++++ +L  +  +  +++ VE ++EANP S+     +     GVNR+S+GVQ
Sbjct: 69  GTPSHVGSKHLSNLLYTLGVSMNLTTEVECSMEANPESLTPELVRDIYALGVNRLSIGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  LR + R H+   A AA+ +AR  F  +S DL+  +P QT   +  ++  A+   
Sbjct: 129 SFDDGILRTVDRVHDGQAARAAVAMARERFDNVSIDLMCGIPGQTPDMFLSDVSEAVRLG 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S+Y L+IE+GT F ++ ++G +   +++    +  +  ++    G H YE+++++ 
Sbjct: 189 VAHVSVYPLSIEEGTPFDRLVEEGRMRDANQDEEALMMGMAPNVLEPEGFHRYEVASYAR 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HN  YW    Y+G+G  A +  +  SHRV +              ++G  V E 
Sbjct: 249 DGFECRHNKAYWTGVPYLGLGVSAVTMDQDASHRVRV--------------QDGAVVDE- 293

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECERNLQRQGFIERVQFSRLR 377
             L   Q   E LMM +R+ +G+S ++    A      +E   +L R   + R +  R R
Sbjct: 294 --LDRRQMVVEDLMMRMRMAQGVSEEELRAAALLVPRALEVFHSLVRDRLV-RKEEGRYR 350

Query: 378 CTQRGMTMLDSV 389
            T  G  + + V
Sbjct: 351 PTLGGWLLGNEV 362


>gi|255068472|ref|ZP_05320327.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sicca
           ATCC 29256]
 gi|255047273|gb|EET42737.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria sicca
           ATCC 29256]
          Length = 418

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 152/397 (38%), Gaps = 26/397 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           G  +  L +Y+H PFC   C YC  N  + + K   + +I+    EM+ +    G R  +
Sbjct: 7   GALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIEYLEKEMELLAPHLGGRHQL 66

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + FGGGTP+ +    I  +   I K++ +    E +IE +P  V         K G N
Sbjct: 67  AQLHFGGGTPTFLSDDQIERVFRMIRKHFQLIPGGEYSIEIDPRKVSRETVLMLGKLGFN 126

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+Q  + +    + R  +  E    I  AR   F  +S DLIY LP QT    +  
Sbjct: 127 RMSVGIQDFDPKVQAAVNRIQSYDETKEVIDAAREAGFKSVSVDLIYGLPHQTAESIKTT 186

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   LS   D L+LY        +F    +     +P     +D+        +  G   
Sbjct: 187 IDTVLSLDPDRLALYHYAHLPH-IFKPQRRIDTEAVPGSEEKLDMLQYCVQTLTERGYVF 245

Query: 251 YEISNHSFLGAE----------SLHNLNYWRYGDY--IGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E            +   Y  Y D   + IG  +  ++     +     E
Sbjct: 246 IGMDHFAKPDDELSIALKEGFLQRNFQGYSTYADCDLVAIGVSSIGKIGSTYSQN----E 301

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +  +++   +      ++    L+ +      ++  L  R  +  + +E + G   D   
Sbjct: 302 RDIDAYYAALDARHLPIMRGYQLNQDDLLRRNIIQDLMCRFALDYRIYESVFGIPFDRYF 361

Query: 359 ------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                    L   G + R++   L  T +G  ++ ++
Sbjct: 362 KDELADLEQLASLGLV-RLKPHGLTVTPKGRFLIRNI 397


>gi|229525012|ref|ZP_04414417.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           bv. albensis VL426]
 gi|229338593|gb|EEO03610.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           bv. albensis VL426]
          Length = 480

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVVLDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|227355096|ref|ZP_03839507.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
 gi|227164883|gb|EEI49730.1| oxygen-independent coproporphyrinogen III oxidase [Proteus
           mirabilis ATCC 29906]
          Length = 457

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +E          L +Y+H PFC K C +C  N  + R+K   + ++     E+    +
Sbjct: 39  ADFEQATKRYPERPLSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R ++ + +GGGTP+ ++ Q I+ ++  + +++    N E++IE +P  +E++    
Sbjct: 99  YFKNRKVTQMHWGGGTPTFLDKQQISRLVALLRQHFHFVENAELSIEIDPREIELDVIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
               G NR+S+GVQ   ++  + + R  + +   + +  AR   F   S DLIY LPKQT
Sbjct: 159 LHNEGFNRLSMGVQDFNKEVQQKVNREQDEAFIFSLVARAREVGFHSTSIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L++ +  + D LS++        LF    K  D  LP     +++   T +  
Sbjct: 219 KESFAFTLKKVIELSPDRLSVFNYAHLPN-LFAAQRKIKDEDLPLAEEKLEILQETITTL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           + +G     + + +           + + + N+  Y      D +G+G  A S +     
Sbjct: 278 TTNGYQFIGMDHFAKPDDELAVAQRQGILHRNFQGYTTHEECDLLGMGVSAISMLGDHYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     EK  + +   V   GHA+     L+ +      ++  L     ++  + E L  
Sbjct: 338 QN----EKVLKEYYARVNSEGHALWRGLSLTHDDCIRRDVIKTLICNFHLNFTEIENLYQ 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     +   G +E +   +++ T RG  ++ ++ 
Sbjct: 394 LDFQDYFKEDLALLAPMAEDGLVE-ISAEKIQVTPRGRLLIRNIC 437


>gi|124023699|ref|YP_001018006.1| oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus str. MIT 9303]
 gi|123963985|gb|ABM78741.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9303]
          Length = 436

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 115/404 (28%), Positives = 181/404 (44%), Gaps = 33/404 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNS-----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
               Y+H PFC ++C YCDF       H    K      IQS+L  +Q    L  P   +
Sbjct: 10  PRSAYLHIPFCHRRCFYCDFAVVPLGDHANGAKGSGSASIQSYLQLLQREIALVKPGPTL 69

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           ++++ GGGTPSL+    I  +LD + + + V    EIT+E +P+S +         AGVN
Sbjct: 70  ATVYIGGGTPSLLSSAQIGALLDQLRQRFGVQLGAEITLEMDPASFDQAYLAAVLAAGVN 129

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQTMTQ 186
           R+SLG QS ++  L  LGR H     + A                S DLI  LP Q +  
Sbjct: 130 RVSLGGQSFDDAVLETLGRRHRRHHLLEACGWLHQAHQCGELKSWSLDLIQNLPGQELVA 189

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L  A+     HLS+Y L++E GT+F    + G+L LP +++A +    T  +    
Sbjct: 190 WKQQLVEAIDTGSPHLSIYDLSVEPGTVFAWRQRRGELDLPDDDLAAEQMQTTSVLLRQA 249

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN++  G  S HN  YW    +   G GA S    G             +W++
Sbjct: 250 GFGRYEISNYALPGHASRHNRVYWSGAGWWAFGQGATS-APWGERLARPRTRDGYCNWIE 308

Query: 307 MVRKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---------- 352
           +    G        +   L  ++Q    L++GLR REG+ ++      G           
Sbjct: 309 VQEVEGLDSSLVAAQARPLPLDEQ----LLVGLRCREGVDLEALSRAWGWTHEQCNALLP 364

Query: 353 NLDIECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLAV 395
           +L +  +  L R G++E +   R + +   GM + + V+  + +
Sbjct: 365 SLQVRWQAALDR-GWLE-LHGRRWQLSDPEGMAISNQVLVEMLL 406


>gi|207744770|ref|YP_002261162.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum IPO1609]
 gi|206596180|emb|CAQ63107.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum IPO1609]
          Length = 489

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 158/405 (39%), Gaps = 28/405 (6%)

Query: 3   YLSAYEN--NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A      +       L +YVH PFC   C YC  N  V +       +I++   EM 
Sbjct: 58  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMA 117

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + +  GP R  + + +GGGTP+ +    +  ++    K++ ++S+ EI++E +P     
Sbjct: 118 MIARHIGPLRQATQLHWGGGTPTFLSHDEMRDVMAATRKHFALTSDAEISVELDPRHAGD 177

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +        G NR SLG+Q  +      + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 178 DTLAVLADLGFNRASLGIQDFDADVQHAIHRVQSVEQTRHVVDSARRLGFQSISFDLIYG 237

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q +  +   L R L  A D LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 238 LPHQHIDTFNATLDRVLEMAPDRLSVYSYAHLPH-LFKPQRRIDVLALPSADEKLDLLAM 296

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 297 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGMSAISRV 356

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + +  +
Sbjct: 357 GD----VYAQNEKELDAYYARIDAGRLPVLRGLTLTPDDHVRRALIGELMCGFELDMCAF 412

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
               G N       ++     L+  G + +V   R+  T +G  +
Sbjct: 413 GARHGLNFRQTFTGELAALAPLEDAGLV-KVGDERIVITPQGRLL 456


>gi|300702555|ref|YP_003744155.1| coproporphyrinogen III oxidase [Ralstonia solanacearum CFBP2957]
 gi|299070216|emb|CBJ41507.1| Coproporphyrinogen III oxidase [Ralstonia solanacearum CFBP2957]
          Length = 491

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 159/405 (39%), Gaps = 28/405 (6%)

Query: 3   YLSAYEN--NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A      +       L +YVH PFC   C YC  N  V +       +I++   EM 
Sbjct: 58  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMA 117

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + +  GP R  + + +GGGTP+ +    +  ++    +++ ++S+ EI++E +P     
Sbjct: 118 MIARHIGPLRQATQLHWGGGTPTFLSHDEMRDVMTATREHFALTSDAEISVELDPRHAGD 177

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +        G NR SLG+Q  +    R + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 178 DTLAVLADLGFNRASLGIQDFDADVQRAIHRVQSVEQTRRVVDSARRLGFQSISFDLIYG 237

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q +  +   L R L  A D LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 238 LPHQHIDTFNATLDRVLEMAPDRLSVYSYAHLPH-LFKPQRRIDALALPSADEKLDLLAM 296

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 297 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGMSAISRV 356

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + +  +
Sbjct: 357 GD----VYAQNEKELDAYYARIDAGRLPVLRGLTLTPDDHVRRALIGELMCGFELDMCAF 412

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
               G N       ++     L+  G + +V   R+  T +G  +
Sbjct: 413 GARHGLNFRQTFTDELTALAPLEDAGLV-KVGDERIVITPQGRLL 456


>gi|327483017|gb|AEA77424.1| Coproporphyrinogen III oxidase, oxygen- independent [Vibrio
           cholerae LMA3894-4]
          Length = 462

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 223 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 442


>gi|297700808|ref|XP_002827424.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial-like [Pongo abelii]
          Length = 442

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 137/380 (36%), Positives = 218/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R +V +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RVEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN + 
Sbjct: 220 DDHVSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRALLREAGFHQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+GIGPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|153214833|ref|ZP_01949641.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           1587]
 gi|124115076|gb|EAY33896.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           1587]
          Length = 480

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 161/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 YLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G + RV    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLV-RVDERMIEVTLRGRLLIRNIC 460


>gi|153803400|ref|ZP_01957986.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-3]
 gi|153830623|ref|ZP_01983290.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           623-39]
 gi|229515850|ref|ZP_04405308.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TMA 21]
 gi|229520092|ref|ZP_04409520.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TM 11079-80]
 gi|297581842|ref|ZP_06943763.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           RC385]
 gi|124121057|gb|EAY39800.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-3]
 gi|148873895|gb|EDL72030.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           623-39]
 gi|229342880|gb|EEO07870.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TM 11079-80]
 gi|229347113|gb|EEO12074.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           TMA 21]
 gi|297533936|gb|EFH72776.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           RC385]
          Length = 480

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|295102754|emb|CBL00299.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii L2-6]
          Length = 360

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 126/381 (33%), Positives = 189/381 (49%), Gaps = 26/381 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           SLG+Y+H P+C  KC YCDF S   +  V +  ++ + L E+         R   +++FG
Sbjct: 2   SLGLYLHIPYCFSKCRYCDFYSAPGQRGVPRA-YVDALLRELSRFAPDAPLRP-DTLYFG 59

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++P + A ++             EIT+EANP +V  ++ + +R+AGVNRIS GV
Sbjct: 60  GGTPSLLDPADAARLIAAAQPL----PGAEITLEANPETVTEDSLRAFREAGVNRISFGV 115

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS  +  L+ LGR H A +A AA   AR   F  +S D++ ALP  T T+++  L+    
Sbjct: 116 QSARDSQLKTLGRPHTAKQARAAFAAARRAGFENLSGDIMLALPHYTQTEFDETLELIED 175

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S Y L IE  + F +   +G   LP+ + A D Y         HG   YEISN 
Sbjct: 176 GGAAHISAYLLKIEPDSAFGRTPPEG---LPTSDEAADFYLYAVEQLEHHGYRQYEISNF 232

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G E  HNL YW  GDY+GIGP AHS +           E         V   G    
Sbjct: 233 ARPGYEGKHNLIYWDCGDYLGIGPAAHSCMGGKRFYYPADTEAFLRDEAAPVMDGGCG-- 290

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERVQF 373
                     A+++L++ LRLR+G+S+ +++   GR      +   +N  + G+      
Sbjct: 291 ----------AEDYLILQLRLRKGLSLDEYKKRYGREFSTTQLAFVQNCVKSGY-ANFDG 339

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             L  T  G+ + +S++A L 
Sbjct: 340 HTLALTPAGLIVQNSILAELL 360


>gi|325270270|ref|ZP_08136877.1| coproporphyrinogen dehydrogenase [Prevotella multiformis DSM 16608]
 gi|324987571|gb|EGC19547.1| coproporphyrinogen dehydrogenase [Prevotella multiformis DSM 16608]
          Length = 422

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 115/425 (27%), Positives = 187/425 (44%), Gaps = 57/425 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG----QENFIQSFLTEMQWM---RQLTGPRSIS 72
           G+Y+H PFC  +C YC F S V   +VG    +E ++ +   EM+     R    P  +S
Sbjct: 3   GLYIHIPFCASRCIYCGFYSTVPSERVGARPVEERYVDALCHEMELKEGGRDGGAPAELS 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-------------VSSNVEITIEANPSSVEV 119
           SI+ GGGTPS +   ++  +   I + +               ++ +EIT+E NP  V V
Sbjct: 63  SIYLGGGTPSQLSFPSLQKLFRTIGRVYRTENRWGGGGGRSGSAAPMEITMECNPDDVTV 122

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYA 178
              +      VNRIS+G Q+  ++ LRFL R H A E   A+   R      +S DL++ 
Sbjct: 123 AFARSLHSLPVNRISMGAQTFSDRRLRFLHRRHTAEEVGTAVSRLREAGIGNISVDLMFG 182

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T+ +W  ++ R L   V+H+S Y L  E+GT  +++ + G +    + +   +Y+ 
Sbjct: 183 FPGETLEEWNEDIDRLLGLDVEHVSAYSLMYEEGTPLHRLLRAGKVREIDDELYRRMYDT 242

Query: 239 TQSITSAHGLHAYEISNHSFL-----------------------------GAESLHNLNY 269
                   G   YEISN + L                                S HN  Y
Sbjct: 243 LVDRLGDAGYEHYEISNFARLTPAPDDESPAPKPQTSNLKPQTSTLKSPSPFRSRHNSAY 302

Query: 270 WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           W    YIGIG  AHS            I     +++  +R++     E+E + ++   ++
Sbjct: 303 WHDVPYIGIGAAAHSYGNGKRSWNVSDI----RAYMDAIREDRLP-CEEERIDADTHYND 357

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ++  LR  EGI +          L +     LQRQG +E  +   L  T++G+ + DSV
Sbjct: 358 TVLTALRTCEGIELASLSAAYRTYL-MHLALPLQRQGLLEE-KGGWLHLTRKGIYVSDSV 415

Query: 390 IANLA 394
           ++ L 
Sbjct: 416 MSELM 420


>gi|15603698|ref|NP_246772.1| coproporphyrinogen III oxidase [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12722258|gb|AAK03917.1| HemN [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 459

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 166/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +        +  L +YVH PFC K C +C  N  + R++   + ++     E++    
Sbjct: 41  QDFIQATKRYPNRPLSLYVHIPFCHKLCYFCACNKTITRHQHKADIYLDFLEREIEHRAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R  + + +GGGTP+ +  Q  A ++  + K++T++ + EI+IE +P  +E+N    
Sbjct: 101 LFKDRIATQVHWGGGTPTYLTEQQSARLMAMLRKHFTIAPDAEISIEMDPREIELNMLDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R+ G NR+S+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q 
Sbjct: 161 LRRIGFNRMSMGVQDFNKDVQKAINRVQDEDFIEALLKRARELGFQSTNLDLIYGLPLQN 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   LQ+ ++   D LS++       + F    K  +  LP+    + +        
Sbjct: 221 VDSFMFTLQKVIALNPDRLSVFNYAHLP-SRFAGQAKIKNEQLPAPETKLTILQKMIETL 279

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
              G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 280 GDAGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   +   G A+ +   +S E      ++  L     +  +  E   G
Sbjct: 340 QN----QKELKHYYTAIDNTGIALHKGFAMSEEDCLRRDVIKQLICNFKLDYQPIEQQYG 395

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D++    L   G +E  + + ++ + +G  ++ ++ 
Sbjct: 396 IQFTSHFAEDLKLLAPLSEDGLLEIGEKA-IQVSAKGRLLIRNIC 439


>gi|257452085|ref|ZP_05617384.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058634|ref|ZP_07923119.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684310|gb|EFS21145.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 365

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 114/376 (30%), Positives = 188/376 (50%), Gaps = 22/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC+ KC YCDF S   +    +  ++++   E+             +I+FGGG
Sbjct: 11  AVYIHIPFCLHKCEYCDFTSFSGKLNWKK-RYLEALYQEISLYEHSYYD----TIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + IA IL+ +          EIT+E NP ++ +   Q Y + GVNR+S+G+QS
Sbjct: 66  TPSLLEGKEIAKILELL----PHDEKTEITVECNPKTLNLKKLQDYFEIGVNRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + E+ L+ LGR H   EA     +AR I F  +S D+++ALP QT+ + E +++  L   
Sbjct: 122 MNEKYLKMLGRLHTVQEAKEVFQMAREIGFQNISVDMMFALPTQTLEEVEEDIENFLCLD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L  E+ T F++  + G       +V  ++Y         +    YEISN + 
Sbjct: 182 ADHISIYSLIWEENTPFFQKLEKGIYQRTENDVEAEMYQKIIETMKENSYEHYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+  +Y+GIG GA   ++     +  S ++  E +   V KN     E+
Sbjct: 242 SGYSSRHNQKYWQNQNYLGIGLGASGYLEE----IRYSNDRDFEHYFSNVNKNRFPREEE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+ E +     ++G R      +  W   +G+   I CE   ++   I+R +    + 
Sbjct: 298 EILNGEMKEQYRYLLGFR-----QLNTWLTPSGKYKKI-CETLFKKSYLIKREEE--YQI 349

Query: 379 TQRGMTMLDSVIANLA 394
           TQ+G+   + ++    
Sbjct: 350 TQKGLFFFNDMLEYFL 365


>gi|262167039|ref|ZP_06034756.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC27]
 gi|262024557|gb|EEY43241.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC27]
          Length = 462

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 223 TAVTFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVTLDKDDLLRREVIKQLICNFKLDKTAIEREF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 442


>gi|262189998|ref|ZP_06048303.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           CT 5369-93]
 gi|262034121|gb|EEY52556.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           CT 5369-93]
          Length = 462

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 223 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEHEF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 442


>gi|121728291|ref|ZP_01681322.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V52]
 gi|147675179|ref|YP_001218302.1| coproporphyrinogen III oxidase [Vibrio cholerae O395]
 gi|121629421|gb|EAX61850.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           V52]
 gi|146317062|gb|ABQ21601.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           O395]
 gi|227011882|gb|ACP08092.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           O395]
          Length = 480

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAVTFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVTLDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|146294994|ref|YP_001185418.1| coproporphyrinogen III oxidase [Shewanella putrefaciens CN-32]
 gi|145566684|gb|ABP77619.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           putrefaciens CN-32]
          Length = 446

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 85/405 (20%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            +    +    S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     
Sbjct: 28  QSLLTAIETSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRAP 87

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++    
Sbjct: 88  LFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFADEGEFSIEVDPREIELSMLDT 147

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT
Sbjct: 148 LKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQT 207

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   +QR L  + D LS++         F    K  D  LPS    +++ + T    
Sbjct: 208 PETFAATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIETL 266

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  + S++     
Sbjct: 267 TGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYA 326

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   G
Sbjct: 327 QN----QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKIDEKLG 382

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            N +     +L           +E V   ++  +  G  ++ ++ 
Sbjct: 383 INFETYFAEDLKLMQTFIDDKLVEVVD-RKITISPTGRLLIRNIC 426


>gi|229527142|ref|ZP_04416536.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           12129(1)]
 gi|229335373|gb|EEO00856.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           12129(1)]
          Length = 480

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 159/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K     LP+    + +   T + 
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKGADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAVAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|153826294|ref|ZP_01978961.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-2]
 gi|149739962|gb|EDM54141.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MZO-2]
          Length = 480

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 159/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K     LP+    + +   T + 
Sbjct: 241 TAATFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKQADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|257466116|ref|ZP_05630427.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917273|ref|ZP_07913513.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691148|gb|EFS27983.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 365

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 114/377 (30%), Positives = 187/377 (49%), Gaps = 24/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC+ KC YCDF S   +    +  ++++   E+             +I+FGGG
Sbjct: 11  AVYIHIPFCLHKCEYCDFTSFSGKLNWKK-RYLEALYQEISLYEHSYYD----TIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + IA IL+ +          EIT+E NP ++ +   Q Y + GVNR+S+G+QS
Sbjct: 66  TPSLLEGKEIAKILELL----PHDEKTEITVECNPKTLNLKKLQDYFEIGVNRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + E+ L+ LGR H   EA     +AR I F  +S D+++ALP QT+ + E +++  L   
Sbjct: 122 MNEKYLKMLGRLHTVQEAKEVFQMAREIGFQNISVDMMFALPTQTLEEVEEDIENFLCLD 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L  E+ T F++  + G       +V  ++Y         +    YEISN + 
Sbjct: 182 ADHISIYSLIWEENTPFFQKLEKGIYQRTENDVEAEMYQKIIETMKENSYEHYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+  +Y+GIG GA   ++     +  S ++  E +   V KN     E+
Sbjct: 242 SGYFSRHNQKYWQNQNYLGIGLGASGYLEE----IRYSNDRDFEHYFSNVNKNRFPREEE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGI-SVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           E L+ E      ++   R   G   +  W   +G+   I CE   ++   I+R +    +
Sbjct: 298 EILNGE------MIEQYRYLLGFRQLNTWLTPSGKYKKI-CETLFEKSYLIKREEE--YQ 348

Query: 378 CTQRGMTMLDSVIANLA 394
            TQ+G+   + ++    
Sbjct: 349 ITQKGLFFFNDMLEYFL 365


>gi|15606603|ref|NP_213983.1| oxygen-independent coproporphyrinogen III oxidase [Aquifex aeolicus
           VF5]
 gi|2983815|gb|AAC07371.1| oxygen-independent coproporphyrinogen III oxidase [Aquifex aeolicus
           VF5]
          Length = 370

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 113/376 (30%), Positives = 186/376 (49%), Gaps = 20/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KCPYCDF S V    V   +++ +   E+   R+L     + +++FGGG
Sbjct: 4   ALYVHVPFCSYKCPYCDFLSLV-NSPVSVRDYLSALKREINLYREL--DVKLETLYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L++P+ +  I++ I K + +S   EIT+E NP +     F+  +K GVNRIS+GVQS
Sbjct: 61  TPTLLKPEELGEIIEEIDKVFGLSGVKEITVECNPETYRKKEFEELKKLGVNRISVGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ LR LGR H   +++  +          ++ DLI+  P Q++   E+EL+    + 
Sbjct: 121 FTEKGLRVLGRKHTVKDSLECLESLFEAGIENVNVDLIWGWPTQSLKDLEVELEHLKKFP 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H+S Y LT+ + T      K G+     E   V+L+ +        G   YEISN + 
Sbjct: 181 VKHVSAYLLTLYEDTPMGLAFKRGEFKPLEEEEVVELHKMLSEGLRELGFKRYEISNWAK 240

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL YW+  +++G+G  A    +   +    +I K    ++K ++++   V  +
Sbjct: 241 EGFECRHNLVYWKMEEFLGVGVSAWGFYENVRYGNTKNISK----YVKFLKEDKKPVEFR 296

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
             L   +   E +M+GLR  EGI  K  +         E  R+         V+  RLR 
Sbjct: 297 VQLDETELEKERIMLGLRTTEGIEEKYLK------FVPEYLRDFFE------VKGGRLRI 344

Query: 379 TQRGMTMLDSVIANLA 394
            +  + + + +I  + 
Sbjct: 345 KEEHLLISNELITEVL 360


>gi|310765932|gb|ADP10882.1| coproporphyrinogen III oxidase [Erwinia sp. Ejp617]
          Length = 457

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 165/406 (40%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +
Sbjct: 39  QAFLQAALRYPERPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +  + I  ++  + +++  S   EI+IE +P  +E++    
Sbjct: 99  LFQQRTVSQMHWGGGTPTFLNKEQIRRLMACLRQHFHFSDTAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +Q    + R  +     A +  AR   F   + DLIY LP QT
Sbjct: 159 LRAEGFNRLSMGVQDFNKQVQEKVNRVQDEETIFALVARARQLGFISTNIDLIYGLPAQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ +    D LS++        LF    K  +  LP     + +   T +  
Sbjct: 219 PESFAFTLQKVVELNPDRLSVFNYAHMPA-LFAAQRKIREAELPDAQQKLAILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +A       + + +    E         LH  N+  Y      D +G+G  A SR+    
Sbjct: 278 TAQDYQFIGMDHFARRDDELAVAQRAGELHR-NFQGYTTQGNCDLLGMGVSAISRLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   +  +  A+     L+ +      ++  L     +S K  E   
Sbjct: 337 AQNH----KELKHYYAQIHASNTALWRGLQLTEDDCLRSDVIKRLICHFSLSFKSIETRW 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D+   + L   G +E    + L  T +G  ++ ++ 
Sbjct: 393 GIRFRDYFAQDLAQLQPLIADGLVECHDNA-LVVTAKGRLLIRNIC 437


>gi|301155477|emb|CBW14943.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Haemophilus parainfluenzae T3T1]
          Length = 455

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 163/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +           L +YVH PFC K C +C  N  + R++   + ++     E++   +
Sbjct: 37  EDFIAAANRYPERPLSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDYLEKEIKARSE 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R  + + +GGGTP+ +  +  A ++  + +++T++ N E++IE +P  +E++    
Sbjct: 97  LFKNRVATQVHWGGGTPTYLTEEQSARLMKMLKEHFTIADNAEVSIEMDPREIELDMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NRIS+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q 
Sbjct: 157 LRNIGFNRISMGVQDFNKAVQKAVNREQDEEFVNALLVRARELGFQSTNLDLIYGLPLQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L + +    D LS++       + F    K  +  LP     +++   T    
Sbjct: 217 VESFMFTLHKVIELNPDRLSIFNYAHLP-SRFAGQAKIKEDQLPPPETKLEILQKTIETL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
              G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GNAGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGLGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V  +G A+ +   ++ E      ++  L     +     E    
Sbjct: 336 QN----QKELKHYYHDVENSGIALHKGLAMTEEDCLRRDVIKQLICNFKLDFASIEKQYN 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++  + L   G I   +   L+ + +G  ++ ++ 
Sbjct: 392 IDFKKHFAEDLQLLQPLLEDGLISETETG-LQVSPKGRLLIRNIC 435


>gi|257465442|ref|ZP_05629813.1| coproporphyrinogen III oxidase [Actinobacillus minor 202]
 gi|257451102|gb|EEV25145.1| coproporphyrinogen III oxidase [Actinobacillus minor 202]
          Length = 455

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 166/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             ++          L +Y+H PFC K C +C  N  + R++   E ++     E++    
Sbjct: 37  EDFKLAAQRYPERPLSLYIHIPFCHKLCYFCACNKVITRHRHKVEIYLDYLEKEIRTRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ I +GGGTP+ ++    A +++ +  N+ V+ + EI+IE +P  +E++    
Sbjct: 97  LFKQRKVTQIHWGGGTPTYLDEDQSARLMEMLKSNFNVAEDAEISIEMDPREIELDMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R+ G NRIS+G+Q   ++  + + R  +     A +  A+   F   + DLIY LPKQ 
Sbjct: 157 LRQIGFNRISMGIQDFNKEVQQLVNREQDEDFIFALMKRAKELGFVSTNVDLIYGLPKQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L+R +    D +S++       + F    K  D +LP     + +   +    
Sbjct: 217 VESFMYTLERVVELNPDRMSVFNYAHLP-SRFAAQIKIKDEMLPPPETKLTILQNSIEFL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             +G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GKNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   + + G A+ +   L+ +      ++  L     +     E    
Sbjct: 336 QN----QKELKQYYADLEEKGIALHKGLVLTKDDCLRRDVIKALICNFKLEFDHLEKAYD 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L   G +E    S +  + RG  ++ ++ 
Sbjct: 392 IDFKHYFAEDLAYLAPLAEDGLLEINDKS-MVVSPRGRLLIRNIC 435


>gi|94969393|ref|YP_591441.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Koribacter versatilis Ellin345]
 gi|94551443|gb|ABF41367.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Candidatus Koribacter versatilis Ellin345]
          Length = 410

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 107/391 (27%), Positives = 177/391 (45%), Gaps = 20/391 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
           +LG+Y+  PFC  KC +C+F S V   ++  + +I     ++    Q+         + S
Sbjct: 2   ALGIYISVPFCRTKCSFCNFASGVFSREL-FDRYINIVAEDIARAEQIAPGAQFESEVDS 60

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPS++ P  +  +   + + + VS+N E+T+E  P ++           GVNR+
Sbjct: 61  IYLGGGTPSVLAPDQLERLFLAVHEKFKVSNNTEVTVECAPGTLTREMLNALVDFGVNRV 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS  ++  R +GR H      A I+ L ++    +S DLI  LP QT   W   LQ
Sbjct: 121 SLGVQSFVDEESRSVGRLHTREITFADINSLRQHGIENISVDLIAGLPHQTPKSWRESLQ 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK-----DGDLVLPSENVAVDLYNLTQSITSAHG 247
             +   V H+S+Y L +++ +   +             +P ++   DLY       +  G
Sbjct: 181 DVVDSQVPHVSVYMLEVDEDSRLGRELMAGGTRYHAHFVPDDDTTADLYQQACDTLNKAG 240

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS-HRVAISIEKHPESWLK 306
           +  YEISN +   +ES HNL YW    Y+G G  AHS +   +   +  S     + +L 
Sbjct: 241 VRQYEISNFARPESESRHNLKYWLRQPYLGFGVDAHSMLASQNCEGLRFSTADDLDQFLA 300

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
                G     +  ++     DE   +GLRL  G+ +   E  +G++        L+   
Sbjct: 301 -----GAPRTFRH-VNRAAAEDEAFFLGLRLNRGVDLSAIEQESGKDPVARRGAALEELT 354

Query: 367 FIERVQFSR--LRCTQRGMTMLDSVIANLAV 395
             E +Q     +R T RG  + + V   L +
Sbjct: 355 EAELLQRDHCTIRLTDRGRLLSNEVFERLTL 385


>gi|91787105|ref|YP_548057.1| coproporphyrinogen III oxidase [Polaromonas sp. JS666]
 gi|91696330|gb|ABE43159.1| oxygen-independent coproporphyrinogen III oxidase [Polaromonas sp.
           JS666]
          Length = 462

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 81/411 (19%), Positives = 159/411 (38%), Gaps = 28/411 (6%)

Query: 2   KYLSAYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT 57
            Y  A     +G  +      L +Y+H PFC   C YC  N  + ++      +++    
Sbjct: 36  DYGQALAQRRSGPAALGQPQPLSLYLHIPFCESLCYYCACNKIITKHHERAATYLRYLSR 95

Query: 58  EMQW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
           E+     +L   + ++ +  GGGTP+ +    +  ++  + +++ +    E +IE +P +
Sbjct: 96  EVDLHTARLGLEQPVTQLHLGGGTPTFLSDAELGELMAMLRRSFALVPGGEYSIEIDPRT 155

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           V+        + G NRIS GVQ  +    + + R   A +  A +  AR I F  ++ DL
Sbjct: 156 VDGARLATLAELGFNRISFGVQDFDPDVQKAVHRIQPAEQVFALMEQARAIGFDSVNIDL 215

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           IY LP+QT   +   L +      D ++LY         F    +     LP     + +
Sbjct: 216 IYGLPRQTPESFARTLAQVQQLRPDRIALYAYAHLPE-RFKPQRRIVSAELPGAAAKLAM 274

Query: 236 YNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAH 283
            + + S   A G     + + +  G        +   + N+  Y      D IG+G  A 
Sbjct: 275 LSQSLSAFEAAGYVYIGMDHFALPGDALAVAKRQGRLHRNFQGYSTQPDCDLIGLGVSAI 334

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            R+     + A    K  E +   + +    V     LS +  A   +++ L  +  +  
Sbjct: 335 GRIGATYSQNA----KTMEEYCDHLDQGRLPVARGLALSRDDLARRAVIVALMCQGQVLF 390

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIER-----VQFSRLRCTQRGMTMLDSV 389
           +  E     +        L++ G +       +  + ++ T +G   + +V
Sbjct: 391 ESIEQAWLLDFQTYFAAELEQLGELAEEGLVVLDDAGIQVTAKGWFFVRAV 441


>gi|255743930|ref|ZP_05417885.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholera
           CIRS 101]
 gi|262151169|ref|ZP_06028308.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           INDRE 91/1]
 gi|255738413|gb|EET93803.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholera
           CIRS 101]
 gi|262031063|gb|EEY49688.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           INDRE 91/1]
          Length = 462

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 43  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 102

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 103 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLHSEFHFADEAEISIEIDPREIQLEVLD 162

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 163 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 222

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 223 TAVTFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 281

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 282 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 341

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 342 AQN----QKELKKYYAQVNEMRHALWKGVTLDKDDLLRREVIKQLICNFKLDKTAIEREF 397

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 398 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 442


>gi|254291925|ref|ZP_04962706.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           AM-19226]
 gi|150422135|gb|EDN14101.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           AM-19226]
          Length = 480

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLRSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAVTFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVALDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|119486127|ref|ZP_01620187.1| coproporphyrinogen III oxidase [Lyngbya sp. PCC 8106]
 gi|119456618|gb|EAW37747.1| coproporphyrinogen III oxidase [Lyngbya sp. PCC 8106]
          Length = 383

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 20/361 (5%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
            + ++     E+   +     + + +IFFGGGTPSL+    +  ILD + + + + +  E
Sbjct: 16  IQQYVDVLCEEI--TQAPVEDQPLETIFFGGGTPSLLSVSQLGQILDRLEQRFGIDAEAE 73

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I++E +P + +++  QG+   G+NR+SLGVQ+ +++ L+  GR+H  ++   AI      
Sbjct: 74  ISMEMDPDTFDLHRLQGFINLGINRVSLGVQAFQDELLQACGRSHTVADVWKAIDFIHTA 133

Query: 168 F-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
                S DLI  LP QT+  W+  +++ L+    H+S Y L +E  T+F + +  G+  L
Sbjct: 134 GVSNYSLDLISGLPHQTLELWQQSVEQVLTLNPPHISHYDLIVEPKTVFGRYYSPGESPL 193

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P++     +Y   Q I +  G   YEISN++  G +  HNL YW    Y G G GA S +
Sbjct: 194 PTDESTTAMYRWAQKILTQAGYTHYEISNYAQPGMQCRHNLVYWHCQPYYGFGMGAASYL 253

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +       ++  +  + + + V         +    +  Q  E LM+GLRL EG++++  
Sbjct: 254 QG----YRLTRPRQTQLYHQWVHSEDQMQDAEWVNRACDQLLESLMLGLRLSEGLNLRSL 309

Query: 347 EMLAGRNLD---IECERNLQRQGFIERVQ---------FSRLRCT-QRGMTMLDSVIANL 393
               G+      + C    Q QG++E V             LR T   G    ++++A+L
Sbjct: 310 SQRFGQQTVKDILYCLHPYQEQGWVEVVAMDGESDLAISGFLRLTDPEGFLFSNTILASL 369

Query: 394 A 394
            
Sbjct: 370 F 370


>gi|15640148|ref|NP_229775.1| coproporphyrinogen III oxidase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121587720|ref|ZP_01677481.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           2740-80]
 gi|153820261|ref|ZP_01972928.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           NCTC 8457]
 gi|153822314|ref|ZP_01974981.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           B33]
 gi|227080352|ref|YP_002808903.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           M66-2]
 gi|229508394|ref|ZP_04397898.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           BX 330286]
 gi|229508925|ref|ZP_04398415.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           B33]
 gi|229517039|ref|ZP_04406485.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC9]
 gi|229606667|ref|YP_002877315.1| coproporphyrinogen III oxidase [Vibrio cholerae MJ-1236]
 gi|254851500|ref|ZP_05240850.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MO10]
 gi|298501115|ref|ZP_07010915.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
 gi|9654516|gb|AAF93294.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121548019|gb|EAX58097.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           2740-80]
 gi|126509195|gb|EAZ71789.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           NCTC 8457]
 gi|126520140|gb|EAZ77363.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           B33]
 gi|227008240|gb|ACP04452.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           M66-2]
 gi|229346102|gb|EEO11074.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           RC9]
 gi|229354042|gb|EEO18975.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           B33]
 gi|229354667|gb|EEO19589.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           BX 330286]
 gi|229369322|gb|ACQ59745.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio cholerae
           MJ-1236]
 gi|254847205|gb|EET25619.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MO10]
 gi|297540149|gb|EFH76210.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio cholerae
           MAK 757]
          Length = 480

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 25/406 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ ++   T      L +Y+H PFC K C YC  N  + R+    + ++     E++   
Sbjct: 61  IADFDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRA 120

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L   R+++ + FGGGTP+ +    I+ ++  +   +  +   EI+IE +P  +++    
Sbjct: 121 SLLIGRNVTQLHFGGGTPTFLTNAQISRLMTLLHSEFHFADEAEISIEIDPREIQLEVLD 180

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R+ G NR+S+GVQ   ++  + + R  +       +  A+   F   + DLIY LPKQ
Sbjct: 181 HLRQEGFNRVSIGVQDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQ 240

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   LQ+ L+     LS++        LF    K  +  LP+    + +   T + 
Sbjct: 241 TAVTFAQTLQQVLTMQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITT 299

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +    E        + + N+  Y      D +G G  A S V    
Sbjct: 300 LTGAGYQFIGMDHFALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAY 359

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K  + +   V +  HA+ +   L  +      ++  L     +     E   
Sbjct: 360 AQN----QKELKKYYAQVNEMRHALWKGVTLDKDDLLRREVIKQLICNFKLDKTAIEREF 415

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     D+   +     G +  V    +  T RG  ++ ++ 
Sbjct: 416 NLRFNHYFRQDLALLQTFIDDGLVT-VDERMIEVTLRGRLLIRNIC 460


>gi|259906709|ref|YP_002647065.1| coproporphyrinogen III oxidase [Erwinia pyrifoliae Ep1/96]
 gi|224962331|emb|CAX53786.1| O2-independent coproporphyrinogen III oxidase [Erwinia pyrifoliae
           Ep1/96]
 gi|283476492|emb|CAY72307.1| O2-independent coproporphyrinogen III oxidase [Erwinia pyrifoliae
           DSM 12163]
          Length = 457

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 164/406 (40%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +
Sbjct: 39  QAFLQAALRYPERPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +  + I  ++  + +++  S   EI+IE +P  +E++    
Sbjct: 99  LFQQRTVSQMHWGGGTPTFLNKEQIGRLMACLRQHFHFSDTAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +Q    + R  +     A +  AR   F   + DLIY LP QT
Sbjct: 159 LRAEGFNRLSMGVQDFNKQVQEKVNRVQDEETIFALVARARQLGFISTNIDLIYGLPAQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+      D LS++        LF    K  +  LP     + +   T +  
Sbjct: 219 PESFAFTLQKVAELNPDRLSVFNYAHMPA-LFAAQRKIREAELPDAQQKLAILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +A       + + +    E         LH  N+  Y      D +G+G  A SR+    
Sbjct: 278 TAQDYQFIGMDHFARRDDELAVAQRAGELHR-NFQGYTTQGNCDLLGMGVSAISRLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   +  +  A+     L+ +      ++  L     +S K  E   
Sbjct: 337 AQNH----KELKHYYAQIHASNTALWRGLQLTEDDCLRSDVIKRLICHFSLSFKSIETRW 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D+   + L   G +E    + L  T +G  ++ ++ 
Sbjct: 393 GIRFRDYFAQDLAQLQPLIADGLVECHDNA-LVVTAKGRLLIRNIC 437


>gi|329960204|ref|ZP_08298646.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fluxus YIT 12057]
 gi|328532877|gb|EGF59654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fluxus YIT 12057]
          Length = 342

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 102/344 (29%), Positives = 168/344 (48%), Gaps = 10/344 (2%)

Query: 55  FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
              E++  +       + +I+FGGGTPS +  ++ + I   I   + +    EIT+EANP
Sbjct: 1   MCQELKNRKDYLKDEPVKTIYFGGGTPSQLSGEDFSSIFRTIEDTYGLEHAEEITLEANP 60

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
             +        +    NRIS+G+Q+ ++ +L+ L R HN+++AI A+   R   F  +S 
Sbjct: 61  DDLTEEYAAMLQALPFNRISMGIQTFDDATLKLLNRRHNSAQAITAVERCRQAGFRNISI 120

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLIY LP +T  +W  +LQ+A+S  V+H+S Y LT EKGT  Y+M +   +    E+ +V
Sbjct: 121 DLIYGLPGETDKRWAHDLQQAVSLNVEHISAYHLTYEKGTRIYEMLQAHRIREVDEDSSV 180

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
             ++         G   YEISN    G  S HN +YW+   Y+G GP AHS         
Sbjct: 181 RFFSTLTDTLGNAGYEHYEISNFCKPGMHSRHNTSYWKGIPYLGCGPSAHSFNTEAREWN 240

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             S     ++++  + K GH   E E L    + +E +M  LR   G+S++  E   G  
Sbjct: 241 LSS----LDTYIDSIEK-GHRSYETEVLDKVTRYNECVMTSLRTSRGVSLEYIEQAFGTE 295

Query: 354 LDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               C        + G +  +    L  T+ G+ + D+++++L 
Sbjct: 296 FRQYCRNMAAPHLKSGKL-NIHNDYLSLTRDGIFISDNILSDLM 338


>gi|213647955|ref|ZP_03378008.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 424

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 90/382 (23%), Positives = 164/382 (42%), Gaps = 24/382 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +  G  
Sbjct: 278 TQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG-- 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              +  +K  + + + V + G+A+     L+ +      ++  L     +     E   G
Sbjct: 336 --YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDFNAVEQQWG 393

Query: 352 RNLDIECE------RNLQRQGF 367
            +            R  ++ G+
Sbjct: 394 LHFAEYFAEVCSYCRRWRKMGW 415


>gi|300689867|ref|YP_003750862.1| coproporphyrinogen III oxidase [Ralstonia solanacearum PSI07]
 gi|299076927|emb|CBJ49540.1| Coproporphyrinogen III oxidase [Ralstonia solanacearum PSI07]
          Length = 490

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 159/405 (39%), Gaps = 28/405 (6%)

Query: 3   YLSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A         +    L +YVH PFC   C YC  N  V +       +I++   EM 
Sbjct: 60  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHARSARYIRALAREMA 119

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + +  GP R  + + +GGGTP+ +    +  ++    +++ ++S+ EI++E +P     
Sbjct: 120 MIARHIGPLRQATQLHWGGGTPTFLSHDEMRDVMAATREHFALTSDAEISVELDPRHASD 179

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
              +     G NR SLG+Q  +    R + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 180 AALEVLAGLGFNRASLGIQDFDADVQRAIHRIQSVEQTRRVVDSARRLGFQSISFDLIYG 239

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q    +   L R L  A + LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 240 LPHQHTATFNATLDRVLEMAPERLSVYSYAHLPH-LFKPQRRIDMLALPSADEKLDLLAM 298

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 299 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGVSAISRV 358

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + +  +
Sbjct: 359 GD----VYAQNEKELDTYYARIDAGELPVLRGLALTPDDHVRRALIGELMCGFELDMCAF 414

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
            +  G +       ++     L+  G + +V   R+  T +G  +
Sbjct: 415 GVRHGLDFRQTFADELTALAPLEDAGLV-KVGDERIVITPQGRLL 458


>gi|319424456|gb|ADV52530.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           putrefaciens 200]
          Length = 458

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 167/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            +    +    S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     
Sbjct: 40  QSLLTAIETSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRAP 99

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++    
Sbjct: 100 LFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFADEGEFSIEVDPREIELSMLDT 159

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT
Sbjct: 160 LKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQT 219

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   +QR L  + D LS++         F    K  D  LPS    +++ + T    
Sbjct: 220 PETFAATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIETL 278

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  + S++     
Sbjct: 279 TGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYA 338

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   G
Sbjct: 339 QN----QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKMDEKLG 394

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              +     +L           +E V   ++  +  G  ++ ++ 
Sbjct: 395 IQFEEYFAEDLKLLQTFIDDKLVEVVD-RKITISPTGRLLIRNIC 438


>gi|188532192|ref|YP_001905989.1| coproporphyrinogen III oxidase [Erwinia tasmaniensis Et1/99]
 gi|188027234|emb|CAO95073.1| O2-independent coproporphyrinogen III oxidase [Erwinia tasmaniensis
           Et1/99]
          Length = 457

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 170/406 (41%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +Y+H PFC + C +C  N  V R++   ++++ + + E+    +
Sbjct: 39  QAFLRAAKRYPERPLSLYLHIPFCHRLCYFCGCNKQVTRHQHKADDYLAALMQEVAARAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R+++ I +GGGTP+ +    I+ ++  + +++ +S   EI+IE +P  +E++    
Sbjct: 99  LFQRRTVNQIHWGGGTPTFLNKGQISRLMASLRQHFRISDTAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +Q    + R  +     A I  AR   F   + DLIY LP QT
Sbjct: 159 LRAEGFNRLSMGVQDFNKQVQEKVNRVQDEEGIFALIARARQLGFVSTNIDLIYGLPTQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+    A D LS++        LF    K  +  LP     + +   T +  
Sbjct: 219 PESFAFTLQKVAELAPDRLSVFNYAHMPA-LFPAQRKIREAELPDVQQKLTILQQTIAAL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +A G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 278 TAQGYQFIGMDHFARHDDELAVAQRAGELHR-NFQGYTTQGHCDLLGMGVSAISMLGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   +R    A+     L+ + +    ++  L  +  +S +  E   
Sbjct: 337 AQNH----KELKDYYAQIRGGDTALWRGLQLTEDDRLRGDVIKRLICQFSLSFESIEARW 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G +       D+   + L   G +E    + L  T +G  ++ +V 
Sbjct: 393 GIHFRDYFAQDLALLQPLIADGLVECHDNA-LVVTAKGRLLIRNVC 437


>gi|55646747|ref|XP_511926.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial isoform 2 [Pan troglodytes]
          Length = 442

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 138/380 (36%), Positives = 218/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R +V +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RVEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRMHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGLWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+GIGPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|225175081|ref|ZP_03729077.1| oxygen-independent coproporphyrinogen III oxidase [Dethiobacter
           alkaliphilus AHT 1]
 gi|225169257|gb|EEG78055.1| oxygen-independent coproporphyrinogen III oxidase [Dethiobacter
           alkaliphilus AHT 1]
          Length = 337

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 94/332 (28%), Positives = 167/332 (50%), Gaps = 9/332 (2%)

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G   + +++ GGGTP+++E   +  +L    ++  ++ + E T+EANP ++     +  
Sbjct: 10  AGGHVVETLYIGGGTPTVLEEAQLEYLLLACRRHLPLN-DAEWTVEANPGTITAQKAKLL 68

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              GVNRISLG+Q + +  L  LGR H A++A  A  L R  FP +S D++  LPKQ+  
Sbjct: 69  ASYGVNRISLGIQDINDCRLALLGRTHTAAQARQAFFLCREHFPTVSVDIMTGLPKQSAE 128

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             E  +     +  DH+SLY L +E+GT    + + G + LP+E   + +    +    +
Sbjct: 129 DVEEAVSEVCRWQPDHISLYGLKVEEGTELASLVEKGKVELPAEEDVLSMMLAGKDRLLS 188

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           HG   YEI+N +  G    HNL YW+   Y+G+G GAHS  +       +    H + + 
Sbjct: 189 HGYEHYEIANFARPGKVCRHNLTYWQNRPYLGLGLGAHSFWQDKRFHNTV----HWQGYR 244

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---L 362
           + + +N   + E+ F++  Q  ++ +M+GLRL +G+   +++     +L     +    L
Sbjct: 245 QGLEQNSLPLQEETFVTRRQMMEDTMMLGLRLMQGVYFAEFQARFACDLRQVFAKEIALL 304

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++QG I      R+  +  G  + + V A   
Sbjct: 305 KKQGLIV-CDAERIYLSSSGYPLANIVFAQFL 335


>gi|207722199|ref|YP_002252636.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum MolK2]
 gi|206587374|emb|CAQ17957.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Ralstonia solanacearum MolK2]
          Length = 491

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 158/405 (39%), Gaps = 28/405 (6%)

Query: 3   YLSAYEN--NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL A      +       L +YVH PFC   C YC  N  V +       +I++   EM 
Sbjct: 58  YLDALHRRAAIAPALHAPLSLYVHLPFCANLCYYCGCNKVVTKDHTRSARYIRALAREMA 117

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + +  GP R  + + +GGGTP+ +    +  ++    K++ ++S+ EI++E +P     
Sbjct: 118 MIARHIGPLRQATQLHWGGGTPTFLSHDEMRDVMAATRKHFALTSDAEISVELDPRHAGD 177

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +        G NR SLG+Q  +      + R  +  +    +  AR   F  +SFDLIY 
Sbjct: 178 DTLAVLADLGFNRASLGIQDFDADVQHAIHRVQSVEQTRHVVDSARRLGFQSISFDLIYG 237

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q +  +   L R L  A D LS+Y        LF    +   L LPS +  +DL  +
Sbjct: 238 LPHQHIDTFNATLDRVLEMAPDRLSVYSYAHLPH-LFKPQRRIDVLALPSADEKLDLLAM 296

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T     A G     + + +           E     N+  Y      D +  G  A SRV
Sbjct: 297 TVERLVAAGYVYIGMDHFARPDDALAIAQREGRLQRNFQGYSTHADCDLLAFGMSAISRV 356

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK  +++   +      V+    L+ +      L+  L     + +  +
Sbjct: 357 GD----VYAQNEKELDAYYARIDAGRLPVLRGLTLTPDDHVRRALIGELMCGLELDMCAF 412

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
               G N       ++     L+  G + +V   R+  T +G  +
Sbjct: 413 GARHGLNFRQTFTDELTALAPLEDAGLV-KVGDERIVITPQGRLL 456


>gi|119943993|ref|YP_941673.1| coproporphyrinogen III oxidase [Psychromonas ingrahamii 37]
 gi|119862597|gb|ABM02074.1| oxygen-independent coproporphyrinogen III oxidase [Psychromonas
           ingrahamii 37]
          Length = 455

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 166/395 (42%), Gaps = 25/395 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              SL +Y+H PFC K C +C  N  + R++   + ++     E++        R +S +
Sbjct: 47  PERSLSLYIHIPFCHKICYFCGCNKIITRHQEKADIYLDYLEKEIKQQALHFKNRHVSQL 106

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ + P  I  ++  + +N++ + N E++IE +P  +E++        G NR+S
Sbjct: 107 HWGGGTPTFLLPAQITRLMTMLRENFSFNPNAELSIEVDPREIELSTIDHLANEGFNRLS 166

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ   ++  + + R+ +    +A +  A+   F   + D+IY LP QT   +   L++
Sbjct: 167 LGVQDFNKEVQKAVNRDQDEDFIVALLKRAKEQGFQSTNLDMIYGLPLQTKQNFAHTLEK 226

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +      LS++       ++F    K  +  +PS    +++   T    +  G     +
Sbjct: 227 VVELDPARLSIFNYAHMP-SIFPAQRKINEDDMPSPAEKLEILQYTIEFLTQAGYQFIGM 285

Query: 254 SNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +    E        + + N+  Y      D +G+G  A S++     +     +K  
Sbjct: 286 DHFAKPTDELAIAQQKGVLHRNFQGYTTQEDADLLGMGVSAISQIGHSYSQN----QKKL 341

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------D 355
            ++ K + ++GHA      L+ +      ++  L     + V + E     N       D
Sbjct: 342 STYYKQIEQSGHAQWRGVGLNEDDLIRREVIKKLICNFKLDVSEIEKQFNLNFKNYFSED 401

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           I+  +       IE    S      +G  ++ ++ 
Sbjct: 402 IKLLQCFIDDKLIEMTDDSITVL-AKGRLLIRNIC 435


>gi|120596872|ref|YP_961446.1| coproporphyrinogen III oxidase [Shewanella sp. W3-18-1]
 gi|120556965|gb|ABM22892.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           W3-18-1]
          Length = 446

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 87  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFADEGEFSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 207 TPETFAATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 265

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 266 LTGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 325

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 326 AQN----QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKMDEKL 381

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G   +     +L           +E V   ++  +  G  ++ ++ 
Sbjct: 382 GIQFEEYFAEDLKLLQTFIDDKLVEVVD-RKITISPTGRLLIRNIC 426


>gi|15643923|ref|NP_228972.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Thermotoga maritima MSB8]
 gi|148270705|ref|YP_001245165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga petrophila RKU-1]
 gi|4981715|gb|AAD36242.1|AE001773_11 oxygen-independent coproporphyrinogen III oxidase, putative
           [Thermotoga maritima MSB8]
 gi|147736249|gb|ABQ47589.1| coproporphyrinogen III oxidase, anaerobic [Thermotoga petrophila
           RKU-1]
          Length = 374

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/378 (27%), Positives = 186/378 (49%), Gaps = 16/378 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH PFC  KC YCDF S V       + +    L E+    ++     I +++FGG
Sbjct: 3   LAVYVHVPFCKSKCVYCDFYSVVS---EKFDEYFSHLLREIDLYEEVLSESEIKTVYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++ P  + ++L+ + +     +  EITIE NP SVE    + Y++ G+NRISLGVQ
Sbjct: 60  GTPSVVPPSFLKMVLEKLERVSRGFTPDEITIEVNPESVETEKLKIYKQIGINRISLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + ++  L+  GR +          +    F  ++FD I  LP +T    + + +    + 
Sbjct: 120 ACDDTVLKNAGRLYKEETLKKKAKIVLEQFENVNFDFILGLPGETDITLKKDFRFLEEFP 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLY L +++ T  + + + G + LP E+     ++L        G   YEISN + 
Sbjct: 180 PQHVSLYLLEVDERTRLFDLIQKGLVELPEEDDVERRHDLFVEFLKERGFLRYEISNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G +SLHNL YWR  +Y+G+G  A   +    +  A       + + + + K        
Sbjct: 240 PGKKSLHNLFYWRNENYLGLGVSAGGHIGRFRYVNAS----DLKEYEEKITKGELPYEYV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG--FIERVQFSRL 376
              + E++A E + MGLR++EG+ +   +      + +     LQ++   ++ +V+  ++
Sbjct: 296 HENTEEEEALETVFMGLRIKEGVELNRVK------ILLPLLEKLQKKYPCYL-KVKNGKI 348

Query: 377 RCTQRGMTMLDSVIANLA 394
             ++ GM     ++++L 
Sbjct: 349 FLSEDGMNFSKKILSDLI 366


>gi|115350845|ref|YP_772684.1| coproporphyrinogen III oxidase [Burkholderia ambifaria AMMD]
 gi|115280833|gb|ABI86350.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria AMMD]
          Length = 463

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 86/414 (20%), Positives = 154/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYLRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +    +A ++      + ++ +   E +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDAEMAELMATTRDYFVLAPDAEAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PARLVHLRNIGFNRLSLGVQDFDPVVQQAINRIQPLAMTADLMSAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D IG G  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPTDELVRAQRNGTLQRNFQGYSTRADTDLIGFGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTADDRLRRDVITQLMCNLELPFSH 394

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G        R L      ++ G +  +   RL     G  ++ ++    
Sbjct: 395 IEAAHGIRFADHFARELDALRGFEQDGLLT-IAGDRLTILPAGRMVVRNIAMAF 447


>gi|30046991|gb|AAH50538.1| Radical S-adenosyl methionine domain containing 1 [Homo sapiens]
 gi|119615016|gb|EAW94610.1| radical S-adenosyl methionine domain containing 1 [Homo sapiens]
          Length = 442

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 136/380 (35%), Positives = 218/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+G+GPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|322689082|ref|YP_004208816.1| coproporphyrinogen III oxidase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460418|dbj|BAJ71038.1| putative coproporphyrinogen III oxidase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 469

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM+  +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMKLTKQWQLDHGIAEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD + K W ++ + EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAVRKIWGIAPDAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +SN +  G ES HNL YWR  D+ G+GPGAHS      H  A++   HP+S
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGLGPGAHS------HYNAVTEADHPQS 288



 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G+G  + S      H +      HP  W   + +N     + E ++ E+  +E +M+GLR
Sbjct: 342 GLGVVSVS------HGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLR 395

Query: 337 LREGISVKDWEM-----------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           L EG+ +                   RN+ ++    +  +G I      R+  T+RG  +
Sbjct: 396 LHEGLDLDRINRAINDAGMSSTPQTLRNVSLDQLAPMVSEGLITVSDNHRVVPTRRGRLL 455

Query: 386 LDSVIANLA 394
            DSVI    
Sbjct: 456 NDSVIEQFF 464


>gi|303273222|ref|XP_003055972.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462056|gb|EEH59348.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 484

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/427 (26%), Positives = 182/427 (42%), Gaps = 52/427 (12%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV--------GQENFIQSFLTEMQWMRQLTGPR-- 69
             YVH PFC ++C YCDF   V             G E ++++   E+         R  
Sbjct: 51  SAYVHLPFCRRRCYYCDFAVSVVGDAHETSDAVTRGMETYVETLSREIANTPSAPSSRGR 110

Query: 70  -----SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                 + +IFFGGGTPSL+ P  +  +LD +   + + ++ EI++E +P + +    + 
Sbjct: 111 RRHHPPLRTIFFGGGTPSLLPPALLRRVLDALRARFGIDADAEISMEMDPGTFDAAKLRS 170

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQ 182
           Y + GVNR+SLGVQS ++  LR  GR H A++A  AI            S DLI  LP  
Sbjct: 171 YAELGVNRVSLGVQSFDDAVLRAAGRAHTAADARVAIETVRREARLRAWSLDLISGLPGL 230

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH--------------KDGDLVLPS 228
           ++  WE  L+ A+   VDH+S+Y L +E+GT F + +                    LP 
Sbjct: 231 SLETWEDSLREAVDAGVDHVSVYDLQVEEGTPFGRWYDRDGGGDRDAAAAATAARPPLPR 290

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD--YIGIGPGAHSRV 286
           E+  +D++    SI    G   YEIS+++   A   HN  YW   D  + G G  A SR 
Sbjct: 291 ESAVIDMFRAASSILRDAGYEHYEISSYARPNARCEHNQTYW-NADRGWYGFGLSATSRT 349

Query: 287 KVGSHRVAISIEKHPESWLKMV---------RKNGHAVVEKEFLSSEQQA-------DEF 330
           + G+        +  E+++  +           +      ++  + E  A        E 
Sbjct: 350 RRGARDARPRKTREYEAFVDAMISIDAAASNDDDDDDDDGRDECAREDDATAVADTLLER 409

Query: 331 LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--GFIERVQFSRLRCTQRGMTMLDS 388
           LM+GLR  +G+  +      G  +  E    L+    G +     +       G  +   
Sbjct: 410 LMLGLRTSDGVDARALREDFGARVVDEVFAVLETYPPGLVTATTATIALTDPEGFLVSTE 469

Query: 389 VIANLAV 395
           VI+ L  
Sbjct: 470 VISTLLA 476


>gi|113955415|ref|YP_729946.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. CC9311]
 gi|113882766|gb|ABI47724.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CC9311]
          Length = 412

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 116/408 (28%), Positives = 177/408 (43%), Gaps = 38/408 (9%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDF---------NSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            S     Y+H PFC ++C YCDF         N          E ++     E+      
Sbjct: 3   ASAPRSAYLHIPFCHRRCFYCDFAVVPLGDRANPFGGSGSGSIEAYLDLLSAEINL---S 59

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
               ++++++ GGGTPSL+ P  IA +L  +   +      EIT+E +P++ E  +    
Sbjct: 60  PQGPALATVYVGGGTPSLLRPDQIAALLQQLKGRYGFQDGAEITLEMDPATFERRDLLAL 119

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALP 180
             AGV R+SLG QS ++  L  LGR H   + + A H  +           S DLI  LP
Sbjct: 120 IAAGVTRVSLGGQSFDDVRLAALGRRHRRQDLLEACHWLQESLQVGELQSWSLDLIRNLP 179

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q   +WE +L++A++    H+S+Y L++E GT+F    K G+L LP E+ A D    T 
Sbjct: 180 DQGNLEWEAQLEQAVAVQAPHVSIYDLSVEPGTVFAWREKRGELALPEEDAAADRIAFTT 239

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                 G   YEISN +  G  S HN  YW    +   G GA S    G         + 
Sbjct: 240 HRLRRAGYSRYEISNFARPGHASRHNRVYWSGVGWWAFGLGATS-APWGERMARPRTREA 298

Query: 301 PESWLKMVRKN---GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
             SWLK   +             L+ + +    L++GLR  EG+ + D     G + +  
Sbjct: 299 YASWLKEQSQKLDSSLLQGSAGSLALDDR----LIVGLRCHEGVDLWDLARRCGWS-EQR 353

Query: 358 CERNL----------QRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
           C R+L            +G +ER    R R +   GM + + V+  + 
Sbjct: 354 CSRDLSALEARWQPFLERGLLERF-GCRWRLSDPEGMAVSNQVLVEVV 400


>gi|304411967|ref|ZP_07393577.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|307305862|ref|ZP_07585608.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
 gi|304349517|gb|EFM13925.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS183]
 gi|306911355|gb|EFN41781.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica BA175]
          Length = 458

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 43  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 99  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             +KAG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 159 TLKKAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 219 TPETFAVTMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 277

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 278 LTGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 337

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 338 AQN----QKDIRPYYEAIDKEGHALWKGCSLNRDDEIRRVVIKQLICHFELDMAKIDEKL 393

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G N +     +L           +E V    +  +  G  ++ ++ 
Sbjct: 394 GINFETYFAEDLKLMQTFIDDKLVEIVDRQ-ITISPTGRLLIRNIC 438


>gi|315269792|gb|ADT96645.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS678]
          Length = 458

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 43  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 99  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 159 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 219 TPETFAVTMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 277

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 278 LTGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 337

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 338 AQN----QKDIRPYYEAIDKEGHALWKGCSLNRDDEIRRVVIKQLICHFELDMAKIDEKL 393

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G N +     +L           +E V    +  +  G  ++ ++ 
Sbjct: 394 GINFETYFAEDLKLMQTFIDDKLVEIVDRQ-ITISPTGRLLIRNIC 438


>gi|91218363|ref|ZP_01255307.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
 gi|91183501|gb|EAS69900.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
          Length = 335

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/336 (30%), Positives = 167/336 (49%), Gaps = 9/336 (2%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           MR+   P ++ +I+FGGGTPSL+  +++ LI + I  ++ V    EIT+EANP  +++  
Sbjct: 1   MRKTELPAAVENIYFGGGTPSLLSQEDLDLIFETIYGHYEVVDQPEITLEANPDDLDLEY 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
            +      VNR+S+GVQS  E  L+ + R H A EA ++I LA+  F  +S DLIY +P 
Sbjct: 61  LKMLYNTKVNRLSIGVQSFFEVDLKLMNRAHTAEEAESSILLAKRFFDNISIDLIYGIPD 120

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             + +W+  L + +   V H+S Y LT+E  T          +    +++A   +++   
Sbjct: 121 MDVERWKANLAKTIELEVSHISSYALTVEPNTPLKTFIDKEIIPPVDDDLAKLHFDILVE 180

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
              A+G   YE SN    G  S +N  YW    Y+GIGP AHS V         +  K  
Sbjct: 181 TMMANGFENYEFSNFGKPGYFSQNNTAYWTGKFYLGIGPSAHSFVHTTRSWNISNNPK-- 238

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             ++K +  +     E+E LS+  + +E++M  LR + G+ +K  E   G         +
Sbjct: 239 --YIKAIEADELPY-EQEVLSTTDRYNEYVMTRLRTKWGVDMKYVEKEFGLVYAAYLTEH 295

Query: 362 L---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L   Q+ G +  ++   L+ T  G  + D + + L 
Sbjct: 296 LQDFQQHGLLV-LKDDLLQVTGEGKFLSDGIASELF 330


>gi|24376202|ref|NP_720246.1| coproporphyrinogen III oxidase [Shewanella oneidensis MR-1]
 gi|24351257|gb|AAN57689.1|AE015905_1 oxygen-independent coproporphyrinogen III oxidase [Shewanella
           oneidensis MR-1]
          Length = 458

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 170/406 (41%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+    
Sbjct: 43  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 99  PLFKHYSVTQMHWGGGTPTFLNPEQIIKLTALIKANFNFADEGEFSIEVDPREIELSMLD 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 159 TLKEAGFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 219 TPETFAATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 277

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 278 LTGAGYQYIGMDHFAKPDDELAKLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 337

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 338 AQN----QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKIDEKL 393

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G   +     +L           +E V   ++  +  G  ++ ++ 
Sbjct: 394 GIKFEEYFAEDLKLLQTFIDDKLVE-VADRKITISPTGRLLIRNIC 438


>gi|8922911|ref|NP_060816.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Homo sapiens]
 gi|145566941|sp|Q9HA92|RSAD1_HUMAN RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|7023659|dbj|BAA92043.1| unnamed protein product [Homo sapiens]
          Length = 442

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 136/380 (35%), Positives = 219/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + +++E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQAAHLPADLEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+G+GPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|127514648|ref|YP_001095845.1| coproporphyrinogen III oxidase [Shewanella loihica PV-4]
 gi|126639943|gb|ABO25586.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           loihica PV-4]
          Length = 446

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 168/405 (41%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
                ++    SN L +Y+H PFC K C YC  N  + R++   + +I+    E+     
Sbjct: 28  EDLLTSIANSKSNKLSLYLHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAP 87

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L     ++ I +GGGTP+ + P+ I  +   + +++ ++   E +IE +P  +E++    
Sbjct: 88  LFKHYQVTQIHWGGGTPTFLSPEQILRLSALLREHFNIAEEGEYSIEVDPREIELSMLDT 147

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            ++AG NRIS+GVQ   ++    + R  +       I  A+   F   + DLIY LP QT
Sbjct: 148 LKEAGFNRISVGVQDFNKEVQIAVNREQDEQFIFDLIAKAKAMGFVSTNIDLIYGLPHQT 207

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   +QR L  + D LS++         F    K  D  LP+    +++ + T    
Sbjct: 208 PESFAETMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPTPQQKLEMLHQTIETL 266

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  + S++     
Sbjct: 267 TGAGYQYIGMDHFAKPDDELAILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYA 326

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K    + + V + GHA+ +   L+ + +    ++  L     + +   +   G
Sbjct: 327 QN----QKDIRPYYESVDEKGHALWKGCKLNRDDEIRRAVIKQLICHFDLDMAKMDERLG 382

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              +     +L           +E V+  ++   + G  ++ ++ 
Sbjct: 383 IKFEEYFAEDLKLLQTFIDDKLVE-VKDRKITVGETGRLLIRNIC 426


>gi|114561230|ref|YP_748743.1| coproporphyrinogen III oxidase [Shewanella frigidimarina NCIMB 400]
 gi|114332523|gb|ABI69905.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           frigidimarina NCIMB 400]
          Length = 446

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 167/402 (41%), Gaps = 27/402 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +YVH PFC K C YC  N  + R+    + +I+   TE+     L   
Sbjct: 32  TSIKNSKSDKLSLYVHIPFCAKLCYYCGCNKIITRHSHKADQYIEYLATEIIKRAPLFKN 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            +++ + +GGGTP+ + P+ I  +   I +++  +   E +IE +P  +E++     ++A
Sbjct: 92  YTVTQMHWGGGTPTFLSPEQILKLTALIKQHFNFADVGEYSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NR+S+GVQ   ++    + R  +       I  A+   F   + DLIY LP QT   +
Sbjct: 152 GFNRVSIGVQDFNKEVQIAVNREQDEQFIFDLIARAKELGFVSTNVDLIYGLPLQTPETF 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              + R +  + D LS++       + F    K  +  +P+    +D+   T    +  G
Sbjct: 212 AKTIARIIELSPDRLSVFNYAHLP-SRFAAQRKIKEHDMPAPQQKLDMLRQTIESLTDAG 270

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E         LH  N+  Y      D +G+G  + S++     +  
Sbjct: 271 YQFIGMDHFAKPNDELAKLQNAGKLHR-NFQGYTTQEECDLLGLGVSSISQIGDCYAQN- 328

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
              +K    + + +  NGHA+ +   L+ + +    ++  +     + +   E     N 
Sbjct: 329 ---QKDIRPYYESIDANGHALWKGCSLNHDDEIRRAVIKQIICHFDLDMDKIEQKFAINF 385

Query: 355 DIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           D     +L           ++     +L  +Q G  ++ ++ 
Sbjct: 386 DEYFAEDLKLLQTFINDKLVDITD-RKLTVSQTGRLLIRNIC 426


>gi|329903145|ref|ZP_08273385.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548479|gb|EGF33150.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 471

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 85/411 (20%), Positives = 156/411 (37%), Gaps = 28/411 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A     T  G   L +Y+H PFC   C YC  N  V +       ++     E++ 
Sbjct: 47  DYLQAVAGLRTRGGRKPLSLYLHIPFCDTVCYYCACNKIVTKKVEKAATYLTYLKREIEM 106

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
             QL    + +  +  GGGTP+      +  ++  + + + ++ +   E +IE +P +V 
Sbjct: 107 QGQLFADMNLVEQVHLGGGTPTYFSDAQMGELMAHVRRWFKLAPDDVGEYSIEVDPRTVS 166

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NRISLGVQ  + +  + + R    SE +A I  AR+  F  +S DLIY
Sbjct: 167 RERVFTLRGQGFNRISLGVQDFDPEVQKAVNRIQPESETLAIIQAARDANFRSVSIDLIY 226

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +      L + ++   D +++Y        +F    +  D  LP+    +D+  
Sbjct: 227 GLPKQNVMTMAQTLAKVIAANPDRIAIYNYAHLPH-VFKPQRRISDTDLPAGETKLDMLA 285

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
           L     +  G     + + +          A+   + N+  Y      D +  G  A S 
Sbjct: 286 LCIRRLTEAGYVYIGMDHFARPTDDLAIAQAQGRLHRNFQGYSTHAELDLVSCGVSAISA 345

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K  +++   + KN   +     L  +      ++  L     +S+  
Sbjct: 346 VAATYSQNV----KTLDAYYAHLDKNELPIARGIKLGMDDILRRAIIQTLMCNFEMSIAS 401

Query: 346 WEMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
            E      +       L       + G +  +    +  T +G  ++ ++ 
Sbjct: 402 IEQAYPITVASYFAAELVQLQTLAQDGLLT-IDDEWISVTPKGRLLIRNIC 451


>gi|325579301|ref|ZP_08149257.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159536|gb|EGC71670.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 455

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 162/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +           L +YVH PFC K C +C  N  + R++   + ++     E++   +
Sbjct: 37  EDFIAAANRYPERPLSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDYLEKEIKARSE 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R  + + +GGGTP+ +  +    ++  +  ++T++++ E++IE +P  +E++    
Sbjct: 97  LFKNRVATQVHWGGGTPTYLTEEQSDRLMKMLKDHFTIAADAEVSIEMDPREIELDMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NRIS+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q 
Sbjct: 157 LRNIGFNRISMGVQDFNKAVQKAVNREQDEEFVNALLVRARELGFQSTNLDLIYGLPLQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L + +    D LS++       + F    K  +  LP     +++   T    
Sbjct: 217 VESFMFTLHKVIELNPDRLSIFNYAHLP-SRFAGQAKIKEEQLPPPETKLEILQKTIETL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
              G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GNAGYKFIGMDHFAKPDDELAVAQEKGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   +  +G A+ +   ++ E      ++  L     +     E    
Sbjct: 336 QN----QKELKHYYHDIEHSGIALHKGLAMTEEDCLRRDVIKQLICNFKLDFAPIEKQYN 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++  + L   G I   +   L+ + +G  ++ ++ 
Sbjct: 392 IDFKKYFAEDLQLLQPLLEDGLISETETG-LQVSPKGRLLIRNIC 435


>gi|62896503|dbj|BAD96192.1| radical S-adenosyl methionine domain containing 1 variant [Homo
           sapiens]
          Length = 442

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 219/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + +++E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQAAHLPADLEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +L+  L + 
Sbjct: 160 LDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLRELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H YE+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+G+GPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|240949344|ref|ZP_04753687.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
 gi|240296295|gb|EER46944.1| coproporphyrinogen III oxidase [Actinobacillus minor NM305]
          Length = 455

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 165/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             ++          L +Y+H PFC K C +C  N  + R++   E ++     E++    
Sbjct: 37  EDFKLAAQRYPERPLSLYIHIPFCHKLCYFCACNKVITRHRHKVEIYLDYLEKEIRTRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ I +GGGTP+ ++    A +++ +  N+ V+ + EI+IE +P  +E++    
Sbjct: 97  LFKQRKVTQIHWGGGTPTYLDEDQSARLMEMLKSNFNVAEDAEISIEMDPREIELDMLDH 156

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R+ G NRIS+G+Q   ++    + R  +     A +  A+   F   + DLIY LPKQ 
Sbjct: 157 LRQIGFNRISMGIQDFNKEVQLLVNREQDEDFIFALMKRAKELGFVSTNVDLIYGLPKQN 216

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L+R +    D +S++       + F    K  D +LP     + +   +    
Sbjct: 217 VESFMYTLERVVELNPDRMSVFNYAHLP-SRFAAQIKIKDEMLPPPETKLTILQNSIEFL 275

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             +G     + + +    E        + + N+  Y      D +G+G  A S +     
Sbjct: 276 GKNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   + + G A+ +   LS +      ++  L     +     E    
Sbjct: 336 QN----QKELKQYYADLEEKGIALHKGLVLSKDDCLRRDVIKALICNFKLEFDRLEKAYD 391

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D+     L   G +E +    +  + RG  ++ ++ 
Sbjct: 392 IDFKHYFAEDLVYLAPLAEDGLLE-INDKAMVVSPRGRLLIRNIC 435


>gi|119773228|ref|YP_925968.1| coproporphyrinogen III oxidase [Shewanella amazonensis SB2B]
 gi|119765728|gb|ABL98298.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           amazonensis SB2B]
          Length = 446

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 86/407 (21%), Positives = 170/407 (41%), Gaps = 27/407 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             LSA E++     S+ L +Y+H PFC K C YC  N  + R+    + +I+   +E+  
Sbjct: 29  DLLSAIEHS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLASEILN 84

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L    +++ + +GGGTP+ + P+ I  +   +  N+  +   E +IE +P  +E+  
Sbjct: 85  RAPLFKGYTVTQMHWGGGTPTFLSPEQILRLTKLLKDNFNFADEGEFSIEVDPREIELTM 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
               ++AG NRIS+GVQ   +Q    + R  +       I  A+   F   + DLIY LP
Sbjct: 145 LDTLKEAGFNRISIGVQDFNKQVQEAVNRPQDEQFIFDLIGKAKAMGFESTNVDLIYGLP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +   +QR L  + D LS++         F    K  D  LPS    +++ + T 
Sbjct: 205 HQTPETFAETIQRILDLSPDRLSVFNYAHLPA-RFAAQRKIKDEDLPSPQQKLEILHQTI 263

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
                 G     + + +           E   + N+  Y      D +G+G  + S++  
Sbjct: 264 ETLVDAGYQYIGMDHFAKPDDELARLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGD 323

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +     +K    + + +  +GHA+ +   L+ + +    ++  L     + +   + 
Sbjct: 324 CYAQN----QKDIRPYYEAIDDHGHALWKGCKLNHDDEIRRVVIKQLICHFDLDMAVIDE 379

Query: 349 LAGRNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
             G   +    ++L+         +  ++  R+  +  G  ++ ++ 
Sbjct: 380 KFGFTFEDYFAQDLKLLQTFIDDKLVTIENRRIHVSDTGRLLIRNIC 426


>gi|296137575|ref|YP_003644817.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
 gi|295797697|gb|ADG32487.1| oxygen-independent coproporphyrinogen III oxidase [Thiomonas
           intermedia K12]
          Length = 467

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 81/399 (20%), Positives = 149/399 (37%), Gaps = 27/399 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
                +    + +Y H PFC   C YC  N    +       ++ S   E++ +  L   
Sbjct: 46  RRRAQRPDEPVSLYFHVPFCETLCYYCGCNKIPTKNHGRSAPYLDSVEQELRLIAGLLQT 105

Query: 69  R-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           R  ++ + +GGGTP+ +  +  A ++    +++ +    E +IE +P  V         +
Sbjct: 106 RLPVTQLHWGGGTPTFLNDEEAARLMTMTREHFDLQPGGEFSIEIDPRKVNEARVAHLAR 165

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            G NR+S+GVQ    +  + + R  +  E    I  AR N F  +S DLIY LP Q +  
Sbjct: 166 LGFNRMSVGVQDFAPEVQQAVNRIQSVEETRLVIDAARANGFGSISLDLIYGLPLQNLDS 225

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L + +  + D LSLY        +F    +  +  LP+  V + L  L        
Sbjct: 226 FARTLDQVIEISPDRLSLYSYAHLPH-IFKPQRRINNEDLPTAEVKLGLLGLAIRRLEEA 284

Query: 247 GLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
           G     + + +  G        E   + N+  Y      D +  G  + S V     + A
Sbjct: 285 GYVYIGMDHFAKPGDELARAQREGKLHRNFQGYSTQAELDLLAFGVSSISNVGNCYAQNA 344

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN- 353
               K  + + +M+            L+ E       +  L     + +         + 
Sbjct: 345 ----KTIDEYTEMLAFGKLPTARGVHLTPEDHLRRTAIQRLMCDFQLDMAALADEFKVDA 400

Query: 354 -----LDIECERNLQRQGFIERVQFS--RLRCTQRGMTM 385
                LD++  + L+  G + R      R++ T +G  +
Sbjct: 401 AATFALDLQRLKPLEDAGLVVREGPQGLRVQVTPQGRLL 439


>gi|148683983|gb|EDL15930.1| radical S-adenosyl methionine domain containing 1, isoform CRA_c
           [Mus musculus]
          Length = 397

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 132/375 (35%), Positives = 208/375 (55%), Gaps = 19/375 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S+FFGGGTPSL 
Sbjct: 1   WPYCEKRCSYCNFNKYIPRG-VEEGTVRNCLVTEARTLLRLSGVQRVESVFFGGGTPSLA 59

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +A +L+ +A+   + ++ E+T+EANP+S        +  AGVNR+S+G+QSL++  
Sbjct: 60  SPHTVAAVLEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSIGLQSLDDAE 119

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ+ L +  DHLS
Sbjct: 120 LQLLGRTHSASDALRTLAEARLLFPGRVSVDLMLGLPAQKVEPWLQQLQKLLYHCDDHLS 179

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE+SN +  GA S
Sbjct: 180 LYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVSNFARNGALS 239

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            HN  YW+ G Y+GIGPGAH R       G  R A      P++W+K V   GH   +  
Sbjct: 240 THNWTYWQCGQYLGIGPGAHGRFVPQGTGGHTREARIQTLEPDNWMKEVTLFGHGTRKCV 299

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQGFIER 370
            L   +  +E L MGLR   G++ + W+            G + ++E             
Sbjct: 300 RLGKLELLEEVLAMGLRTDVGVTHQHWQQFEPQLTLWDVFGASKEVEELLAQGL----LL 355

Query: 371 VQFSRLRCTQRGMTM 385
           + +  LRC+  G+ +
Sbjct: 356 LDYRGLRCSWEGLAV 370


>gi|282908903|ref|ZP_06316721.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327167|gb|EFB57462.1| coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 297

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 8/288 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFCV+ C YCDFN +  + +   + ++ + +TEM   +     R++ +++ GGG
Sbjct: 16  SAYIHIPFCVRICTYCDFNKYFIQNQ-PVDEYLDALITEMSTAK----YRNLKTMYVGGG 70

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRIS+GVQ+
Sbjct: 71  TPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRISMGVQT 128

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L  AL   
Sbjct: 129 FKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMD 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YEISN + 
Sbjct: 189 IQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFAL 248

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
            G ES HN  YW   +Y G G GA   V    +     +  + ++  K
Sbjct: 249 DGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINK 296


>gi|294341934|emb|CAZ90363.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Thiomonas
           sp. 3As]
          Length = 467

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 80/399 (20%), Positives = 148/399 (37%), Gaps = 27/399 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
                +    + +Y H PFC   C YC  N    +       ++ S   E++ +  +   
Sbjct: 46  RRRAQRPDEPVSLYFHVPFCETLCYYCGCNKIPTKNHGRSTPYLDSVEQELRLIASILQA 105

Query: 69  R-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           R  ++ + +GGGTP+ +  +  A ++    +++ +    E +IE +P  V         +
Sbjct: 106 RLPVTQLHWGGGTPTFLNDEEAARLMAMTREHFDLQPGGEFSIEIDPRKVNEARVAHLAQ 165

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQ 186
            G NR+S+GVQ    +  + + R  +  E    I  AR N F  +S DLIY LP Q +  
Sbjct: 166 LGFNRMSVGVQDFAPEVQQAVNRIQSVEETRLVIDAARANGFSSISLDLIYGLPFQNLDS 225

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L + +  + D LSLY        +F    +     LP+  V + L  L        
Sbjct: 226 FARTLDQVIEISPDRLSLYSYAHLPH-IFKPQRRINAEDLPTAEVKLGLLGLAIRRLEEA 284

Query: 247 GLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
           G     + + +  G        E   + N+  Y      D +  G  + S V     + A
Sbjct: 285 GYVYIGMDHFAKPGDELARAQREGKLHRNFQGYSTQAELDLLAFGVSSISNVGNCYAQNA 344

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN- 353
               K  + + +M+            L+ E       +  L     + +         + 
Sbjct: 345 ----KTIDEYTEMLAFGKLPTARGVHLTPEDHLRRTAIQRLMCDFQLDLAALADEFKVDA 400

Query: 354 -----LDIECERNLQRQGFIERVQFS--RLRCTQRGMTM 385
                LD++  + L+  G + R      R++ T +G  +
Sbjct: 401 ATTFALDLQRLKPLEDAGLVVREGPQGLRVQVTPQGRLL 439


>gi|296454057|ref|YP_003661200.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296183488|gb|ADH00370.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 476

 Score =  272 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQL-----TGPRSIS 72
           VY+H PFC+++C YCDFN++          + N+    + EM   +Q           +S
Sbjct: 4   VYIHVPFCLRRCGYCDFNTYTATDLGAGASRGNYANMVIREMALTKQWQLDHGIEEPPVS 63

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++FFGGGTP+++  +++  +LD I K W+++ + EIT EANP +V           G  R
Sbjct: 64  TVFFGGGTPTILAARDLVAMLDAIRKVWSIAPDAEITTEANPDTVNEYYINELAAGGFTR 123

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +S G+QS     L+ L R H  +   A ++ A     R S DLIY  P +++  W   + 
Sbjct: 124 VSFGMQSAVPHVLKTLDRTHTPANVAAGVNAANKAGLRSSVDLIYGAPGESLDDWRTSVT 183

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A+   V+H+S Y LT+E  T   +    G L  P+++     Y +   + +A GL  YE
Sbjct: 184 TAIDLGVNHISAYALTVEPTTKMGRQIAAGTLPKPNDDDEAAKYEIADDLFAAAGLEWYE 243

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +SN +  G ES HNL YWR  D+ G+GPGAHS      H  A++   HP+S
Sbjct: 244 VSNWARPGYESQHNLGYWRNVDWAGLGPGAHS------HYNAVTEADHPQS 288



 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 17/129 (13%)

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G+G  + S      H +      HP  W   + +N     + E ++ E+  +E +M+GLR
Sbjct: 349 GLGVVSVS------HGLRSWDIAHPRLWGTAINENRVPWADSETITPEENLEELIMLGLR 402

Query: 337 LREGISVKDWEM-----------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           L EG+ +                   R + ++    +  +G I      R+  T+RG  +
Sbjct: 403 LHEGLGLDRINRAINDAGMSSTPQTLRTVSVDQLAPMISEGLITVSDNHRVVPTRRGRLL 462

Query: 386 LDSVIANLA 394
            DSVI    
Sbjct: 463 NDSVIEQFF 471


>gi|320170747|gb|EFW47646.1| radical S-adenosyl methionine domain-containing protein 1
           [Capsaspora owczarzaki ATCC 30864]
          Length = 480

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 129/356 (36%), Positives = 189/356 (53%), Gaps = 22/356 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISS 73
              ++ VY+HWP+C + CPYC FN  +    V      ++ +TE+   +  +   R ISS
Sbjct: 45  DPAAVSVYMHWPYCSRICPYCAFNRTLMDKSVDVARMQRAMVTELGAQLAHIGPGRKISS 104

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANP----SSVEVNNFQGYRKA 128
           ++FGGGTPSL  P  +  +L  +      + S +E+T+E NP     S  +   Q +  A
Sbjct: 105 VYFGGGTPSLAPPGLVKDLLHTLRAYQPDLPSGMEVTLEFNPIQCHGSGGLELLQSFAAA 164

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           GV R SLGVQ+     L+ LGR+H   +A+ A+  AR +FP R+S DL++A P QT+  W
Sbjct: 165 GVTRASLGVQTFNPVHLKTLGRDHTPEQALDALQNARAVFPGRVSLDLMFATPTQTIRDW 224

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E +LQ A+++A  H+SLY LT+EKGT F+  H  G L LP+++ A D+  L     S+H 
Sbjct: 225 EEDLQLAVAHADAHISLYHLTLEKGTSFFTRHSRGALALPNDDQAGDMLELASRTLSSHQ 284

Query: 248 ---LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV------------GSHR 292
               H YE++N +    ES HNL YW   DY+ IGPGAH RV +               R
Sbjct: 285 PRPWHRYEVANFAQPSHESQHNLGYWAGNDYLAIGPGAHGRVTLPPLPAAGTNATSTWRR 344

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            A   ++    WL+ V   G     +E  +   +  E L M LR R GI+ + W+ 
Sbjct: 345 FATVQQRSTPHWLQSVETRGRGTHREEQQTPVDRLQEVLTMALRTRRGITTRAWDA 400


>gi|326316387|ref|YP_004234059.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373223|gb|ADX45492.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 460

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 162/412 (39%), Gaps = 32/412 (7%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  +    L +YVH PFC   C YC  N  + R+    + +++    E+
Sbjct: 36  EYVLALQQRRLGSAAKAVPLSLYVHIPFCESLCYYCACNKIITRHPERADVYLRYLSREI 95

Query: 60  QW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              M       ++S +  GGG+P+ +    +  +++ + +++T+    E +IE +P +V+
Sbjct: 96  DLHMAHCAPGHAVSQLHIGGGSPTFLGDDALQELMNMLRRSFTLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                   + G NR+S GVQ  +    + + R   A +  A +  AR I F  ++ DLIY
Sbjct: 156 AQRLARLAELGFNRLSFGVQDFDPAVQKAVHRVQPAEQVFALVQEARRIGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   ++  L +      D ++LY         F    +     LP  +  V + +
Sbjct: 216 GLPRQTPESFDRTLAQVCELRPDRIALYAYAHLPE-RFKPQRRIVSAELPMASAKVSMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
            + +     G     + + +  G        +   + N+  Y      D I +G  A  R
Sbjct: 275 RSLNAFQEAGYVYVGMDHFALPGDALAVAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGR 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           +     + A    K  + +  ++ +    VV    L+ +      ++M L  +  +  + 
Sbjct: 335 IGATYSQNA----KTLDEYYDLINQGRLPVVRGLALTRDDLVRRSVIMALMCQGEVLFEP 390

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                  D+        +IE    +   G +   +   +  T+ G   +  V
Sbjct: 391 MEQSWLIDFRRYF--AAEIEVLEGMAGDGLVTVGEDG-ISVTEMGWFFVRGV 439


>gi|217975434|ref|YP_002360185.1| coproporphyrinogen III oxidase [Shewanella baltica OS223]
 gi|217500569|gb|ACK48762.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS223]
          Length = 446

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 87  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 207 TPETFAVTMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 265

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 266 LTGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 325

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 326 AQN----QKDIRPYYEAIDKEGHALWKGCSLNRDDEIRRVVIKQLICHFELDMAKIDEKL 381

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G N +     +L           +E V    +  +  G  ++ ++ 
Sbjct: 382 GINFETYFAEDLKLIQTFIDDKLVEIVDRQ-ITISPTGRLLIRNIC 426


>gi|126172303|ref|YP_001048452.1| coproporphyrinogen III oxidase [Shewanella baltica OS155]
 gi|153002847|ref|YP_001368528.1| coproporphyrinogen III oxidase [Shewanella baltica OS185]
 gi|160877594|ref|YP_001556910.1| coproporphyrinogen III oxidase [Shewanella baltica OS195]
 gi|125995508|gb|ABN59583.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS155]
 gi|151367465|gb|ABS10465.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS185]
 gi|160863116|gb|ABX51650.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           baltica OS195]
          Length = 446

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLSQEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    S++ + +GGGTP+ + P+ I  +   I  N+  +   E +IE +P  +E++   
Sbjct: 87  PLFKHYSVTQMHWGGGTPTFLNPEQILKLTSLIKANFNFAEEGEYSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQIAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   + + +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 207 TPETFAVTMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 265

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 266 LTGAGYQYIGMDHFAKPDDELAKLQREGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 325

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 326 AQN----QKDIRPYYEAIDKEGHALWKGCSLNRDDEIRRVVIKQLICHFELDMAKIDEKL 381

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G N +     +L           +E V    +  +  G  ++ ++ 
Sbjct: 382 GINFETYFAEDLKLMQTFIDDKLVEIVDRQ-ITISPTGRLLIRNIC 426


>gi|256372069|ref|YP_003109893.1| Coproporphyrinogen dehydrogenase [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256008653|gb|ACU54220.1| Coproporphyrinogen dehydrogenase [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 363

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 116/378 (30%), Positives = 169/378 (44%), Gaps = 37/378 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFF- 76
            +YVH PFC ++C YCDF+  +R       +F+     E+    +  L   R  ++  F 
Sbjct: 14  ALYVHVPFCRRRCAYCDFSVAIR---EPDRDFVDDVERELANRVEEGLVDERFCATSVFL 70

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++   +A ++          S  E+TIE NP  + V     +R+AGV RIS+G
Sbjct: 71  GGGTPSYLDDGAVARLIRLARPV----SGAEVTIEVNPEDLSVGRVARWREAGVGRISVG 126

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRA 194
           +QSL+++ L  LGR HNA++A+  I      F   R+S DLI+  P +    W   L   
Sbjct: 127 LQSLDDRVLAHLGRGHNAADALGRIRAVVEAFADLRVSVDLIFGDPLEDDASWRRTLAGV 186

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   + H+S Y LT+E GT F  +  D       +      Y +  ++  A G   YEIS
Sbjct: 187 VDLGIGHVSTYALTVEPGTRFRSLRVD-------DETQARRYEVADAVLGAAGYAWYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N +  G ES HN  YW  G Y+G+GP AHS           S  +    W + VR     
Sbjct: 240 NWARPGQESRHNQTYWGGGAYLGLGPSAHSFRDPVRSWNVASWPR----WRERVRAGLVP 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
               E LSS  +  E   + LR R+GI  +                    +G        
Sbjct: 296 TEGLEVLSSSARVLEARYLALRQRDGIDEEAV---------PAWAAAFFEEG-----APG 341

Query: 375 RLRCTQRGMTMLDSVIAN 392
           R R T RG  + D ++A 
Sbjct: 342 RRRLTVRGRLLADEIVAR 359


>gi|307104111|gb|EFN52366.1| hypothetical protein CHLNCDRAFT_138795 [Chlorella variabilis]
          Length = 472

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 107/439 (24%), Positives = 186/439 (42%), Gaps = 64/439 (14%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVG--------QENFIQSFLTEMQWMRQLTGPRSI 71
             YVH PFC +KC YCDF        +          + +++  + E++   Q      +
Sbjct: 29  AAYVHLPFCKRKCSYCDFPVIAVGKDLAGTPHVQDNMQRYVEMVVQEIEA-SQRLNSEPL 87

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTPSLI    +  +L  + + + +++  E++IEA+P + +    + Y   GV 
Sbjct: 88  QSVFFGGGTPSLISLPLLEQLLAALDQRFGLAAGAEVSIEADPGTFDAARLRSYMGMGVT 147

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQS +++ L   GR H+A++   AI        P  S DL+  LP+ T   W+  
Sbjct: 148 RVSVGVQSFQDELLALCGRAHDAADVYRAIEAVHAAGVPSWSLDLMSGLPQLTQELWQRS 207

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++AL  A  H+S Y L +E+ T F K +  G+  LPS++ A D+Y          G   
Sbjct: 208 LEQALDAAPHHISTYDLQVEEHTPFAKRYWPGEAPLPSDDAAADMYCQASHTLRGAGFEH 267

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV---------------------- 288
           YE+SN++  G    HN+ YW+ G + G+G G+ S ++                       
Sbjct: 268 YEVSNYALPGHRCRHNMVYWQGGAFYGLGLGSASYLQARGRAAGSATHLIGRHQLAGRCR 327

Query: 289 -----GSHRVAISIEKHPESWLKMVRKNGH---AVVEKEFL---SSEQQADEFLMMGLRL 337
                G            + WL+    +       V   FL   S+++   + +M+ LRL
Sbjct: 328 LPGSCGRRFSRPKRLNAYKQWLEQFAADAEQLGPRVPGAFLPPESADEVLLDSVMLRLRL 387

Query: 338 REGISVKDWEMLAGRNLD-----IECERNLQRQGFIERVQF---------------SRLR 377
            +G+ +        +  +         R    +G+                       +R
Sbjct: 388 ADGLDLSQLAARHPQGEEAAALVAAALRPHVERGWAVASNASSSGSSSGGSAGGTVRHVR 447

Query: 378 C-TQRGMTMLDSVIANLAV 395
               +G  M + +I+++  
Sbjct: 448 LADPQGFVMSNDIISDVFA 466


>gi|170732237|ref|YP_001764184.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia MC0-3]
 gi|169815479|gb|ACA90062.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia MC0-3]
          Length = 463

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 85/414 (20%), Positives = 156/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N      +     ++     EM  
Sbjct: 42  DYVRAAGD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QAALFDPSRPVTQLHWGGGTPTFLSDDETAELMAATREHFALAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPVVQQAINRIQPRAMTADLLAAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDAALPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D +G G  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLLGFGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+ + +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTPDDRLRRDVITQLMCNLALPFSH 394

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G         +++  R  +R G +  +   RL     G  ++ ++    
Sbjct: 395 VEAAHGIRFADHFARELDALRPFERDGLLT-IAGDRLTIHPAGRMVVRNIAMAF 447


>gi|116515278|ref|YP_802907.1| YggW [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116257132|gb|ABJ90814.1| putative oxidase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 383

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 112/381 (29%), Positives = 192/381 (50%), Gaps = 13/381 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            + +Y+H P+C+KKCPYCDF+S+ +  K+ ++ +I++   + +  ++    R I S+F G
Sbjct: 11  PISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKISKRKILSVFIG 70

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL++  +I   +  I K    S   EITIE NP ++  N    Y   G+NR S+GV
Sbjct: 71  GGTPSLLKLSSIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYNFGINRTSIGV 130

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+L    L+ + R HN  + I  I     I    ++ D+IY LP+Q++     +L+  ++
Sbjct: 131 QTLNNNLLKKIERTHNKKKTIKLIKSTNKIKNRNLNIDIIYGLPEQSIQDSLNDLKIIIN 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +H+S Y L IE  T FY      ++ LPS      +  L + +    G   YEIS+ 
Sbjct: 191 FKPEHISWYLLDIEPNTPFYTK----NIKLPSLKKTRKMQKLGKELLIKSGYQQYEISSF 246

Query: 257 SF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +       +HNLNYW +GDYIGIG GAH ++     +    I +  ++           +
Sbjct: 247 ARKKKYRCIHNLNYWNFGDYIGIGCGAHGKIT----KKNKDIVRTIKTKQDSQYIKKKYI 302

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQRQGFIERVQF 373
            +K  +S +    EF +   RL + I  +D+E      +    +     ++ GF++  + 
Sbjct: 303 QKKYIVSKKDIPFEFFLNKFRLLKPILHQDFENTTNIKKRKIKKKISIAEKHGFLQTKKK 362

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           S +  T+ G   L+S+++   
Sbjct: 363 SWI-ITKHGKKKLNSLLSIFL 382


>gi|76809126|ref|YP_334202.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1710b]
 gi|76578579|gb|ABA48054.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710b]
          Length = 481

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 239

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 240 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 298

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 299 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 357

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 358 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 413

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 414 SHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 461


>gi|304399052|ref|ZP_07380921.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
 gi|304353512|gb|EFM17890.1| oxygen-independent coproporphyrinogen III oxidase [Pantoea sp. aB]
          Length = 457

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 164/405 (40%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  +       L +YVH PFC + C +C  N  V R +   + ++     E+     
Sbjct: 39  TDFQRAVARYPDRPLSLYVHIPFCHRLCYFCGCNKIVTRQRHKADRYLDVLEQEIIQRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + +GGGTP+ ++   I+ ++  + ++++V+ + E++IE +P  +E++    
Sbjct: 99  LFRERKVTQLHWGGGTPTFLDNTQISRLVGLLKQHFSVAEDAEMSIEVDPREIELDVIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +     + R  +       +  AR   F  +S DLIY LP QT
Sbjct: 159 LRSLGFNRLSMGVQDFNKSVQERVNRVQDEEVIFGLMARAREQGFSSVSIDLIYGLPLQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R L+ + D LS++        +F    K  +  LPS    +D+   T +  
Sbjct: 219 PASFAWTLERVLALSPDRLSVFNYAHLPA-MFAAQRKIKEDELPSAQQKLDILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S       
Sbjct: 278 TQQGYQFIGMDHFAKPQDELAIAQREGQLHRNFQGYTTQGDSDLLGLGVSAISMTGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K   +W   V + G+ +     L+ +      ++  L     +     E   G
Sbjct: 338 QN----QKDLNTWYACVEQQGNGLWRGIALTDDDCLRRDVIKTLICNFSLDFAATEARWG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D+   + L   G + +     L  T  G  ++ ++ 
Sbjct: 394 IRFSDYFAEDMALLKPLIADGLVVQTAKG-LEVTGIGRLLIRNIC 437


>gi|292486525|ref|YP_003529391.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           CFBP1430]
 gi|292897762|ref|YP_003537131.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291197610|emb|CBJ44704.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291551938|emb|CBA18975.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           CFBP1430]
          Length = 457

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 167/406 (41%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +
Sbjct: 39  QAFLQAALRYPQRPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +  Q I  ++  + +++ +S   EI+IE +P  +E++    
Sbjct: 99  LFQQRTVSQMHWGGGTPTFLNKQQIRRLMACLRQHFHISDTAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +Q    + R  +     A +  AR   F   + DLIY LP QT
Sbjct: 159 LRAEGFNRLSMGVQDFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ +    D LS++        LF    K  +  LP     + +   T +  
Sbjct: 219 PASFAFTLQKVVELDPDRLSIFNYAHMPA-LFAAQRKIREAELPDAQQKLAILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +A       + + +    E         LH  N+  Y      D +G+G  A SR+    
Sbjct: 278 TAQDYQFIGMDHFARRNDELAIAQRAGELHR-NFQGYTTQGDCDLLGMGVSAISRIGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   +  +  A+     L+ +      ++  L     +S +  E   
Sbjct: 337 AQNH----KELKHYYAHIHASNTALWRGLQLTEDDCLRADVIKRLICHFSLSFESVEARW 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G +       D+   + L   G +E    + L  T +G  ++ ++ 
Sbjct: 393 GIHFRDYFAQDLAQLQPLIADGLLECHDNA-LVVTAKGRLLIRNIC 437


>gi|260219848|emb|CBA26791.1| Oxygen-independent coproporphyrinogen-III oxidase-like protein
           HI0463 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 320

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/283 (37%), Positives = 169/283 (59%), Gaps = 7/283 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGP 68
           ++       L +YVH P+C+KKCPYCDFNSH   +  + ++ +I + + +++    L   
Sbjct: 35  SLQFSALPPLSLYVHLPWCIKKCPYCDFNSHEQAKDGLQEKRYIDAVIADLEAALPLIWG 94

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+I SIF GGGTPSL  P++I  +L  I     + ++ EIT+EANP + E + F+ +R A
Sbjct: 95  RNIHSIFIGGGTPSLFSPESIDRLLGDIRARLRLEADCEITMEANPGTFEKDRFKAFRGA 154

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           GV R+S+GVQS  +  L+ LGR H+ ++A+AA+  A   F   + D++YALP QT  Q +
Sbjct: 155 GVTRLSIGVQSFNDTHLKALGRVHDRAQALAAVEEAAASFNTFNLDIMYALPGQTQAQLD 214

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           ++L  AL +   H+S+Y LTIE  T F K        +P ++ A  + +     T+A G+
Sbjct: 215 VDLATALQFQPPHISIYHLTIEPNTYFAKFPP----QIPEDDTAYAMLDRITEATAAAGM 270

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGP--GAHSRVKVG 289
             YE+S ++  G    HN+NYW++GDY+G+G    A S ++ G
Sbjct: 271 DRYEVSAYARQGHRCFHNVNYWQFGDYLGLGAVRTASSALRTG 313


>gi|167816662|ref|ZP_02448342.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 91]
 gi|254259589|ref|ZP_04950643.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
 gi|254296946|ref|ZP_04964399.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
 gi|157808050|gb|EDO85220.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
 gi|254218278|gb|EET07662.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
          Length = 483

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 SHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|254177477|ref|ZP_04884132.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
 gi|160698516|gb|EDP88486.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
          Length = 489

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 68  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 127

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 128 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 187

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 188 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 247

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 248 PRQTPESFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 306

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 307 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 365

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 366 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 421

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 422 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 469


>gi|53719973|ref|YP_108959.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei K96243]
 gi|52210387|emb|CAH36368.1| putative oxygen-independent coproporphyrinogen oxidase
           [Burkholderia pseudomallei K96243]
          Length = 481

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAEHNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 239

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 240 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 298

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 299 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 357

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 358 GTSYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 413

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 414 SHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 461


>gi|254246110|ref|ZP_04939431.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia cenocepacia PC184]
 gi|124870886|gb|EAY62602.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia cenocepacia PC184]
          Length = 507

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 155/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N      +     ++     EM  
Sbjct: 86  DYVRAAGD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMAL 143

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +       ++    +++ ++   + E +IE +P +V 
Sbjct: 144 QAALFDPSRPVTQLHWGGGTPTFLSDDETVELMAATREHFALAPDADAEFSIEIDPRTVT 203

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 204 PATLVHLRTIGFNRLSLGVQDFDPVVQQAINRIQPLAMTADLLGAARATGFHSVSVDLIY 263

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 264 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDAALPPPETRIALLG 322

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D +G G  +  +
Sbjct: 323 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLLGFGVSSIGK 382

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+ + +    ++  L     +    
Sbjct: 383 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTPDDRLRRDVITQLMCNLALPFSH 438

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G         +++  R  +R G +  +   RL     G  ++ ++    
Sbjct: 439 VEAAHGIRFADHFARELDALRPFERDGLLT-IAGDRLTIHPAGRMVVRNIAMAF 491


>gi|300863685|ref|ZP_07108619.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
 gi|300338317|emb|CBN53765.1| coproporphyrinogen III oxidase [Oscillatoria sp. PCC 6506]
          Length = 465

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 77/406 (18%), Positives = 154/406 (37%), Gaps = 30/406 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GP 68
            ++      L +Y H PFC   C +C  N+ + + K   E ++   L ++  M +L    
Sbjct: 48  AVSNYKKTPLSLYCHIPFCETACYFCGCNTVITQRKEISEPYLNYLLRDISQMAELISRD 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R++  + +GGGTP+ +    +  +   I +++      EI+IE NP ++  N     R+ 
Sbjct: 108 RTVQQMHWGGGTPNYLSLSQVETLWTAINQHFKFDPQAEISIEVNPRTLNRNYVLFLREL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    Q    + R         A+   +   F  ++ DLIY LP Q +  +
Sbjct: 168 GFNRISFGIQDFNPQVQEAVNRIQPEDLLFDAMGWIKEAGFESVNVDLIYGLPHQNLDTF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +++ +    D ++++           +     +  LP     +D+  +T    + +G
Sbjct: 228 RDTIKKTIKLDPDRIAVFNFAYVPWLKPVQRRLPEEA-LPQAAEKLDILQMTIEELTQNG 286

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D IG G  + S +      V +
Sbjct: 287 YQFIGMDHFAKPNDELSVAQREGQLHRNFQGYTTKPESDLIGFGVTSISMLND----VYV 342

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              K  + +   + +    +     L+ +       +M L  +  +S  D E       D
Sbjct: 343 QNHKKLKDFYLAIDQGTLPIERGVRLNQDDIVRRTAIMELMCQFELSKDDLEEKYHLRFD 402

Query: 356 IEC----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                           LQ  G + +V  + ++ T  G  ++ ++ A
Sbjct: 403 QGFDEYFLGERSELEKLQADGLL-QVSHNHIQVTPAGRLLIRNIAA 447


>gi|217969710|ref|YP_002354944.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T]
 gi|217507037|gb|ACK54048.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp.
           MZ1T]
          Length = 473

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 159/403 (39%), Gaps = 26/403 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-L 65
                 G  S  L +Y H PFC   C YC  N  + +       +++    E++     L
Sbjct: 56  LAKRAVGGVSKPLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLKYLAKEIEMQAACL 115

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G R ++ +  GGGTP+ +    +  ++  + +++T+  N E +IE +P  V+ +  +  
Sbjct: 116 EGSRQVTQLHLGGGTPTFLSHDEMRELMAAVREHFTLVPNGEYSIEVDPRKVDFDTVKLL 175

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTM 184
            + G NR+S+GVQ   E   + + R  +  E    I  AR N F  +S DLIY LP+Q  
Sbjct: 176 AELGFNRMSVGVQDFAEDVQQAVNRIQSFDETKLVIDAARANGFKSVSMDLIYGLPRQNP 235

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           T ++  L + L  + D +SLY      G LF    +     +P+ +  + L  L     +
Sbjct: 236 TSFDRTLDQVLEISPDRISLYSYAHLPG-LFKPQRRINSGDMPTADTKLALLQLGIRRLT 294

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           +   + N+  Y      D +  G  A  ++      
Sbjct: 295 EAGYVYIGMDHFAKPDDELTIAQRQGRLHRNFQGYSTHAECDLLAFGVSAIGKIGP---- 350

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
           V     K  + +   + ++   V+    L+++      ++  L     +S++  E+    
Sbjct: 351 VYAQNVKTLDEYYDALDRDELPVLRGIELTADDLLRRAIIQALMCHFELSMQSIEIAYLV 410

Query: 353 NLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
           N        L      ++ G + ++    +     G  ++  +
Sbjct: 411 NFREYFAEELADLQEMEKAGLV-KIDGDWISVQPGGRLLVRGI 452


>gi|53725698|ref|YP_102403.1| coproporphyrinogen III oxidase [Burkholderia mallei ATCC 23344]
 gi|52429121|gb|AAU49714.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 23344]
          Length = 481

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 239

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 240 PRQTPESFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 298

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 299 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 357

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 358 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 413

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 414 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 461


>gi|296202473|ref|XP_002748473.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial [Callithrix jacchus]
          Length = 442

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 137/380 (36%), Positives = 216/380 (56%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+HWP+C K+C YC+FN ++ R    +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYIHWPYCEKRCSYCNFNKYIPRGME-EAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + ++ E+T+EANP+S  V+    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPVSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRTHSARDALRTLAEARWLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +A ++Y   ++     G   YE+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFAQVQQGALPAPDPELAAEMYERGRAALREAGFRQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+GIGPGAH R       G  R A      P++W+K V + GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMRFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + WE            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWEQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|134094858|ref|YP_001099933.1| coproporphyrinogen dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133738761|emb|CAL61808.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Herminiimonas arsenicoxydans]
          Length = 476

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/413 (21%), Positives = 164/413 (39%), Gaps = 32/413 (7%)

Query: 4   LSAYENNMTG----QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ YE  + G        +L +Y+H PFC   C YC  N  V R +     ++     E+
Sbjct: 46  IADYERAVAGVRAKTEKRALSLYLHIPFCNTVCYYCGCNKIVTRDRSKAVTYLDYLKREV 105

Query: 60  QWMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSS 116
               +L      I  + FGGGTP+ +  + +  ++  + + +T + +   E +IE +P +
Sbjct: 106 AMQGRLFAGMNQIEQLHFGGGTPTYLSDEQMDDLMAHLRRWFTFAPDAVGEYSIEIDPRT 165

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           V        R+ G NR+SLGVQ  +    + + R     + +  I  AR   F  +S DL
Sbjct: 166 VSRERIHTLRRQGFNRLSLGVQDFDPVVQKAVNRIQPEQQTLDIIAAARAADFRSVSVDL 225

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           IY LPKQT+T     L + ++   D +++Y        LF    +  +  LP  +  +++
Sbjct: 226 IYGLPKQTLTTIGQTLDKVIAADPDRIAIYNYAHMPH-LFKPQRRIAEEDLPDADTKLEM 284

Query: 236 YNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAH 283
             L     +        + + +  G        E   + N+  Y      D +  G  A 
Sbjct: 285 LFLCIRRLNEAAYIYIGMDHFAKPGDDLAVAQREGRLHRNFQGYSTHAEADLVSCGVSAI 344

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S +     +      K  + +   + +N   VV    L ++      L+  L     +S+
Sbjct: 345 SAIGPTYSQNV----KTLDVYYDHIDRNELPVVRGIELKADDLLRRQLIQRLMCNFELSI 400

Query: 344 KDWEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            D       +       ++E  R +Q  G I  +    LR T +G  ++ ++ 
Sbjct: 401 ADIAQTYQIDFASYFAPELEKLRVMQEDGLIT-LDEDWLRVTLKGRLLIRNIC 452


>gi|328955423|ref|YP_004372756.1| oxygen-independent coproporphyrinogen III oxidase [Coriobacterium
           glomerans PW2]
 gi|328455747|gb|AEB06941.1| oxygen-independent coproporphyrinogen III oxidase [Coriobacterium
           glomerans PW2]
          Length = 396

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 174/385 (45%), Gaps = 19/385 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +YVH PFC  +CPYCDF S     R        ++      +  +  +     +   + 
Sbjct: 5   ALYVHMPFCRSRCPYCDFFSCALGARGSDAQAGAYLDMVCARIDELGSIGVLDHLRCGYI 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL  P     +   +A+       VEIT EANP S   +      +AG  RISLG
Sbjct: 65  GGGTPSLFGPA----LAGAVARIRRWCEPVEITCEANPESCTASFCSAIARAGATRISLG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL ++ L  +GR H    A+ AI +AR     +S DL+  LP QT   WE  L   + 
Sbjct: 121 VQSLIDEELAVMGRIHTRERALCAIEIARATGMSVSCDLMCGLPGQTADSWERTLLDVIE 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            A DH+S+Y L+IE GT F +       ++P E++  DL    +++    G   YE++++
Sbjct: 181 AAPDHISVYPLSIEPGTPFERRCARDAHLVPDEDLQADLMIAARAMLREAGFEPYEVASY 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGA---HSRVKVGSHRVAIS-IEKHPESWLKMVRKN- 311
           +  G   LHN+ YW    Y  IGP A    S  +   +R A   +E  P +    +R+  
Sbjct: 241 ARSGHACLHNIAYWTAKSYAAIGPSAAAMFSVDEFTRYREAFPGVEPGPRAARVRLRQRD 300

Query: 312 -GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFI 368
                 E EFL   +   E LM+G+R+  GI     +       D    R L+   +G +
Sbjct: 301 ARGRSFEAEFLDERETVAEDLMLGMRMSAGIGAGLLDRARTTLGDAALTRALESALEGGL 360

Query: 369 E----RVQFSRLRCTQRGMTMLDSV 389
                  +  RL  T+RG    + +
Sbjct: 361 ASWSRVGRDERLVPTERGWLFGNEL 385


>gi|312170593|emb|CBX78856.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           ATCC BAA-2158]
          Length = 457

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/406 (21%), Positives = 166/406 (40%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+           L +Y+H PFC + C +C  N  V R +   ++++ + + E+    +
Sbjct: 39  QAFLQAALRYPQRPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARAR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++S + +GGGTP+ +  Q I  ++  + +++ +S   EI+IE +P   E++    
Sbjct: 99  LFQQRTVSQMHWGGGTPTFLNKQQIRRLMACLRQHFHISDTAEISIEVDPRETELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +Q    + R  +     A +  AR   F   + DLIY LP QT
Sbjct: 159 LRAEGFNRLSMGVQDFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQ+ +    D LS++        LF    K  +  LP     + +   T +  
Sbjct: 219 PASFAFTLQKVVELDPDRLSIFNYAHMPA-LFAAQRKIREAELPDAQQKLAILQQTIATL 277

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +A       + + +    E         LH  N+  Y      D +G+G  A SR+    
Sbjct: 278 TAQDYQFIGMDHFARRNDELAIAQRAGELHR-NFQGYTTQGDCDLLGMGVSAISRIGDSY 336

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +      K  + +   +  +  A+     L+ +      ++  L     +S +  E   
Sbjct: 337 AQNH----KELKHYYAHIHASNTALWRGLQLTEDDCLRADVIKRLICHFSLSFESVEARW 392

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G +       D+   + L   G +E    + L  T +G  ++ ++ 
Sbjct: 393 GIHFRDYFAQDLAQLQPLIADGLLECHDNA-LVVTAKGRLLIRNIC 437


>gi|193222329|emb|CAL61807.2| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Herminiimonas arsenicoxydans]
          Length = 485

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 85/410 (20%), Positives = 160/410 (39%), Gaps = 26/410 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL       T  G   L +YVH PFC   C YC  N  V R +     ++     E++ 
Sbjct: 48  DYLQTVVGLRTRGGMWPLSLYVHIPFCESVCHYCSCNKVVTRDRSKAATYLSYLKHEIEM 107

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L      I  +  GGGTP+ +    +  ++  + +++  +S+   E  IE +P +V 
Sbjct: 108 QGNLFAGMNQIEKLHIGGGTPTYLNDAQMGELMAHLRRHFRFASDFDGEYAIEVDPRTVT 167

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           V      RK G NRIS+GVQ  +    + + R  +  + +  I  AR   F  +S DLIY
Sbjct: 168 VERIHALRKQGFNRISIGVQDFDPDVQQAVNRIQSEQDTLNIIRAAREACFRSVSIDLIY 227

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +      L + ++ + D +++Y   + +  +F    +  +  LPS +  +++++
Sbjct: 228 GLPKQNVITMAQTLNKVINASPDRIAVYNY-VHRPNMFKPQRRIDEDDLPSLDARLNMFS 286

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
           L     +  G     + + +           +   + N+  Y      + +  G    S 
Sbjct: 287 LCIRRLTDAGYVYIGMDHFAKPSDDLAIAQRQGRLHRNFQGYSSHAEHNLVAFGVSGISA 346

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V       A    K  + + + + +N   +V    LS +      ++  L     +S+  
Sbjct: 347 VAATYSENA----KTLDEYYERIEQNELPIVTGVKLSMDDLLRRIIIQMLMCNFELSIDS 402

Query: 346 WEMLAGRNLDIECERNLQRQGFIER-----VQFSRLRCTQRGMTMLDSVI 390
            E+             L +   +E      V    +  T +G  ++ +V 
Sbjct: 403 IELAYPITFKTYFAAELDKLHELEDNGLVTVDDEWISVTPKGRLLIRNVC 452


>gi|254184283|ref|ZP_04890873.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
 gi|184214814|gb|EDU11857.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
          Length = 483

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 SHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|67641813|ref|ZP_00440580.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|124385948|ref|YP_001028839.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10229]
 gi|126451435|ref|YP_001081249.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10247]
 gi|254199302|ref|ZP_04905668.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|254205615|ref|ZP_04911967.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|254357773|ref|ZP_04974046.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|124293968|gb|ABN03237.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126244305|gb|ABO07398.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147748898|gb|EDK55972.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|147753058|gb|EDK60123.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|148026900|gb|EDK84921.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|238522803|gb|EEP86245.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
          Length = 483

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPESFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|160901693|ref|YP_001567274.1| oxygen-independent coproporphyrinogen III oxidase [Petrotoga
           mobilis SJ95]
 gi|160359337|gb|ABX30951.1| oxygen-independent coproporphyrinogen III oxidase [Petrotoga
           mobilis SJ95]
          Length = 380

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 165/381 (43%), Gaps = 8/381 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            SN + VY+H PFCVK+C YCD+ S        +  +  +   E+    +    R + +I
Sbjct: 2   NSNDIAVYLHIPFCVKRCLYCDYVS--TTDLSLKAKYFNALSKEIALKGEKLKGRKVRTI 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS +E + I      + ++  +S   E TIE NP SV     Q Y++ G+NRIS
Sbjct: 60  YFGGGTPSFVEEEFILQTFRSLQEHMDLSDLEEFTIEVNPESVNEKKVQFYKEIGINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G QS  ++ L+ +GR+H+ ++ + +  L  + +  ++ D I  LP +        L+  
Sbjct: 120 MGFQSTSDKILKTVGRSHDFNKGLESYKLLTSFYDNINIDFIVGLPYENFETVNSNLEFI 179

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                 H+S Y L     T      +  ++ LP +++  DL +           + YEIS
Sbjct: 180 EKMKPSHISYYLLDSSHDTPLKHFLEIKEMKLPEDDLVYDLLDYIYDQLKKLQYNRYEIS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           + S    E +HN  YW   DY+G G  A   +    +     +    ++++  +      
Sbjct: 240 SWSLPQKECIHNQFYWYNLDYVGFGVSAGGHINNERYVNTSDV----KAYITKLNNEELP 295

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ-F 373
              K       +  E L M LRL +GI+         +N+       L +    E +   
Sbjct: 296 YDTKNANDEFAELLETLFMSLRLTKGITYDSLVQRFSKNVVDNVLNQL-KNNLEEYISID 354

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             ++ T +G+     V   L 
Sbjct: 355 DSIKLTTKGLNFSRFVFEKLL 375


>gi|325282290|ref|YP_004254831.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           proteolyticus MRP]
 gi|324314099|gb|ADY25214.1| oxygen-independent coproporphyrinogen III oxidase [Deinococcus
           proteolyticus MRP]
          Length = 378

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 23/389 (5%)

Query: 11  MTGQGSNSL-GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           M+      +  +YVH PFC   CPYCDF+  + R     E ++     E + +     P 
Sbjct: 1   MSVPAPAPIRHLYVHVPFCPSICPYCDFH-VLTRQSGLVEQYLAQVEREAERLAAEY-PV 58

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + +++ GGGTPS +    +A ++  + +        E T+E NP +V       +R  G
Sbjct: 59  ELDTVYLGGGTPSFLRDSEMAALVGSVQRWLGW-GRAENTLEINPGTVSAERAAHWRALG 117

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
            +R S+GVQSL + +L FLGR H+A++A AA+        R+S DLI A+  Q +     
Sbjct: 118 FDRASVGVQSLHDPTLLFLGRRHSAAQARAAVEHLLAREFRVSGDLITAVAGQPLE---A 174

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +++      V H+S Y LTIE GT F +          SE      + +T ++ +  G  
Sbjct: 175 DIRGLHELGVGHISAYTLTIEPGTEFARRGVTV-----SEADERRGFEVTAALLAELGYE 229

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPESWLKMV 308
            YEISN++  G +S HNL YW    Y+G+GPGA       +  V+      H   WL   
Sbjct: 230 RYEISNYARPGQQSQHNLAYWHTRHYLGLGPGAAGHYPAAAPAVSMRRTNPHLHEWLAGA 289

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQ 365
           +       E E ++      + L MGLRLR G+++ +    +G ++  E    +     +
Sbjct: 290 Q------GEAELVTGHDWVTDALFMGLRLRTGVNLAELSRRSGVDVAREYAPAIRANVER 343

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G + + +  +L+ T+ G  +L+SVI +  
Sbjct: 344 GLLVQ-EGQQLQATEAGWWILNSVIGDFL 371


>gi|241763106|ref|ZP_04761166.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
 gi|241367731|gb|EER61985.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           delafieldii 2AN]
          Length = 460

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 158/410 (38%), Gaps = 28/410 (6%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+ A      G  +    L +YVH PFC   C YC  N  + ++    + +++    E+
Sbjct: 36  DYVLALSQRRLGTAATALPLSLYVHIPFCESLCYYCACNKIITKHHDRADVYLRYLSREI 95

Query: 60  QW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                     +++S +  GGGTP+ +    +  ++  + +++T +   E +IE +P +V 
Sbjct: 96  DLHTAHCGTGQTVSQLHLGGGTPTFLSDDGLRQLMAMLRRSFTFAPGGEYSIEVDPRTVS 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                   + G NR+S GVQ  + +  + + R   A +  A +  AR+  F  ++ DLIY
Sbjct: 156 AERLAVLAELGFNRLSFGVQDFDAEVQKAVHRIQPAEQVFALVEAARSLGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   ++  L + +    D ++LY         F    +     LP+ +  V + +
Sbjct: 216 GLPRQTPESFDRTLAQVVQLRPDRIALYAYAHLPD-RFKPQRRIISTELPTASSKVTMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
            +       G     + + +           +   + N+  Y      D IG+G  A  R
Sbjct: 275 RSLETFIDAGYVYVGMDHFALPTDALAVAKRQGRLHRNFQGYSTQPDCDLIGLGVSAIGR 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K  E +   + +    VV    L+ +      ++M L  +  +  + 
Sbjct: 335 VGATYSQNA----KSLEEYYDHLDQGRLPVVRGLALNRDDLVRRAVIMALMCQGELLFEP 390

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
            +     +        L++      QG +       ++ T  G   +  +
Sbjct: 391 LDQAWLIDFRKYFAPELEQMETMAEQGLVVLSAEG-VKVTSMGWFFVRGI 439


>gi|218196346|gb|EEC78773.1| hypothetical protein OsI_19006 [Oryza sativa Indica Group]
          Length = 495

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/443 (25%), Positives = 185/443 (41%), Gaps = 78/443 (17%)

Query: 23  VHWPFCVKKCPYCDFNSHV-------------RRYKVGQENFIQSFLTEMQWMRQL-TGP 68
           VH PFC K+C YCDF                         ++++  L E+   R +    
Sbjct: 49  VHLPFCRKRCHYCDFPIVALGTSSPPTSPHGGDGDDPRIADYVRLLLREVAATRPVSDDG 108

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + ++FFGGGTPSL+ P+ +A +LD +   + +S++ E++IE +P + +    +     
Sbjct: 109 VPLETVFFGGGTPSLVPPRLVAAVLDALRARFGLSASPEVSIEMDPGTFDAAKLRELVGL 168

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQ 186
           GVNR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT   
Sbjct: 169 GVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEEM 228

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYK----------------------------M 218
           WE  L+  +     H+S+Y L IE+GT F +                             
Sbjct: 229 WEESLRCTVDARPTHVSVYDLQIEQGTKFGQLWVEPIRLTLNPVLDKVATQSFFIINACR 288

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
           +  G   LP+E  + + Y +     S  G + YEIS++   G E  HN+ YW+   +   
Sbjct: 289 YTPGVYPLPNEKDSANFYKIASKRLSEAGYNHYEISSYCKTGYECKHNVTYWQNRSFYAF 348

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS--EQQADEFLMMGLR 336
           G G+ S +      +  S  +  + + + V+K  + V   E  +S  +  A + +M+ LR
Sbjct: 349 GLGSASYING----IRFSRPRRMKEYAEWVQKLENGVWSHESGNSGIKDMAMDVVMLSLR 404

Query: 337 LREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSR------------------ 375
              G+ V+ +    GR+L        R     G +  +   R                  
Sbjct: 405 TAWGLDVQSFSKTFGRSLTESLCNTFRPFVESGLVIAMDMERRALQPSEFELDLQHDGEN 464

Query: 376 ------LRCT-QRGMTMLDSVIA 391
                 +R +   G  + + +I+
Sbjct: 465 GSRVAFIRLSDPDGFLLSNELIS 487


>gi|254195878|ref|ZP_04902304.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
 gi|169652623|gb|EDS85316.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
          Length = 481

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 239

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 240 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 298

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 299 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 357

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 358 GTSYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 413

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 414 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 461


>gi|107021993|ref|YP_620320.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia AU 1054]
 gi|116688937|ref|YP_834560.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia HI2424]
 gi|105892182|gb|ABF75347.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia AU 1054]
 gi|116647026|gb|ABK07667.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia HI2424]
          Length = 463

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/416 (20%), Positives = 156/416 (37%), Gaps = 34/416 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N      +     ++     EM  
Sbjct: 42  DYVRAAGD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QAALFDPSRPVTQLHWGGGTPTFLSDDETAELMAATREHFALAPDTDAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    S     +  AR   F  +S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPAVQQAINRIQPLSMTADLLGAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDAALPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D +G G  + S+
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLLGFGVSSISK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+ + +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTPDDRLRRDVITQLMCNLALPFSH 394

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
            E   G         +++  R  +R G +        R T    G  ++ ++    
Sbjct: 395 VEAAHGIRFADHFARELDALRPFERDGLLTIAAD---RLTIHPAGRMVVRNIAMAF 447


>gi|257784602|ref|YP_003179819.1| oxygen-independent coproporphyrinogen III oxidase [Atopobium
           parvulum DSM 20469]
 gi|257473109|gb|ACV51228.1| oxygen-independent coproporphyrinogen III oxidase [Atopobium
           parvulum DSM 20469]
          Length = 415

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/402 (26%), Positives = 179/402 (44%), Gaps = 33/402 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +Y+H PFC +KC YCDF+S   R+     + ++ +   ++    QL    +  +++ GG
Sbjct: 15  ALYLHIPFCSQKCFYCDFSSWSTRQDDSRMKKYVNALKHQLDEAAQLGILATTKTVYMGG 74

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL++   +    D      +++  +E ++EANP S+           GV RISLGVQ
Sbjct: 75  GTPSLLDQGAV----DLAHHTSSITHPIEFSMEANPDSLSDELLASLSAGGVTRISLGVQ 130

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  +  L+ LGR H+A  A   +  A+     +S DL+ A+P+QT + WE  L R +S  
Sbjct: 131 SFNDNELKELGRIHSADLAYDRVLAAKESGYEVSVDLMCAIPEQTESSWEYTLSRFISLG 190

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V+H+S+Y LTIE GT   K  +D D+     +V  D       +  A G   YE+++++ 
Sbjct: 191 VNHVSVYPLTIEDGTALAKQTQDKDIPWNVYDVQADRMQTASKMLQAAGFERYEVASYAR 250

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------------------RVAISIEKH 300
                 HN  YW    Y+G+G  A S +    +                  RV + +   
Sbjct: 251 NQKSCKHNKMYWTGESYLGLGTSAASMLTAFEYDALAKENAFLPSRPQDAIRVRLVVLDS 310

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---EMLAGRNLDIE 357
           P+   + +        + EFL+  +   E LM+  RL E I+       E + G     E
Sbjct: 311 PKKIAEGI-SLFSTEFDVEFLTYREAVAEDLMLHARLTELIAPALLDESEQVFGALTLQE 369

Query: 358 CERNLQRQGFIERVQF------SRLRCTQRGMTMLDSVIANL 393
                 +   +E V        +  R T++G  + + +    
Sbjct: 370 VFDACVQDELLECVDAADSEIKASYRPTKKGWLLGNELYGRF 411


>gi|167895153|ref|ZP_02482555.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 7894]
 gi|167919791|ref|ZP_02506882.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei BCC215]
          Length = 483

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GTSYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|197333954|ref|YP_002154849.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio fischeri
           MJ11]
 gi|197315444|gb|ACH64891.1| oxygen-independent coproporphyrinogen III oxidase [Vibrio fischeri
           MJ11]
          Length = 457

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 158/405 (39%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++   T      L +Y+H PFC K C +C  N  + R+    + ++ S   E++    
Sbjct: 39  AEFDMACTQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + FGGGTP+ +       ++  +   +      EI+IE +P  +E++    
Sbjct: 99  LFTDRKVTQLHFGGGTPTFLTKVQFTRLMTLLRGEFQFEDGAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  + + R+ +    I  +  A++  F   + DLIY LPKQ+
Sbjct: 159 LRDEGFNRLSIGVQDFNKEVQQLVNRDQDEDFIIQMVQRAKDLGFRSTNLDLIYGLPKQS 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++R L      LS++       TLF    K  D  LP+    + +   T    
Sbjct: 219 ADSLANTIKRVLEMEPGRLSVFNYAHMP-TLFAAQRKIKDADLPAPAEKLVMLQETIETL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFALPDDELAVAQREGVLHRNFQGYTTQGECDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V +  HA+     L ++      ++  L     +  K  E    
Sbjct: 338 QN----KKDLKEYYAQVDEQRHALWRGVALDNDDLIRREVIKQLICNFTLDTKAIEAEFN 393

Query: 352 RNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            + D     +            +   +  R+    RG  ++ ++ 
Sbjct: 394 LDFDTYFAEDIKLLQTFINDELVTMHE-GRIDVELRGRLLIRNIC 437


>gi|257126826|ref|YP_003164940.1| oxygen-independent coproporphyrinogen III oxidase [Leptotrichia
           buccalis C-1013-b]
 gi|257050765|gb|ACV39949.1| oxygen-independent coproporphyrinogen III oxidase [Leptotrichia
           buccalis C-1013-b]
          Length = 436

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/449 (24%), Positives = 190/449 (42%), Gaps = 97/449 (21%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF + VR  K  +  +I   + E++   +     +  +I+FGGG
Sbjct: 11  AIYIHIPFCDKKCEYCDFCTFVRMEKEYR-KYIDYLIREIRMYPKF----TYDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++  + I  I+  +      + N EIT+E NP+ + +   +  R+ G+NR+S+G+QS
Sbjct: 66  TPSVLPVEMIREIMQEL----EWTENTEITLELNPTDMTLEKLKEIREIGINRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+F+GR H++ +A+    +AR   F  ++ DL++ +P Q++   + +L       
Sbjct: 122 FQNHVLKFIGRQHSSDDAVNVYRMAREAGFENITVDLMFGIPNQSIEDLQRDLNILKELK 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +++S+Y L  E+GT+F+   + G L    ++V   +Y +     + +G   YEISN + 
Sbjct: 182 PENVSIYSLIWEEGTVFWSKLQKGILSEIDQDVEAQMYEMIIEFFNENGYCHYEISNFAR 241

Query: 259 LGAE-----------------------SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
           +                            HNL YWR   +IG+G  A +      H    
Sbjct: 242 IDENLWKNQISENIEDFEMIKKRQKNGGRHNLKYWRNKKFIGVGMSATAYYGENRHSNVR 301

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL--MMGLRL-REGISVKDWEMLAGR 352
           +  K    + K +      + E      ++   E L  M+GLRL +EGI           
Sbjct: 302 TFNK----YYKFLDNGKLPIDENTVEIVDEIESEKLKRMLGLRLIQEGI----------E 347

Query: 353 NLDIECERNLQRQGFIER------------------------------------------ 370
             + E    L   G +E+                                          
Sbjct: 348 YFEDERVEKLIENGLLEKFTAKKIKKINSFTENTGKVEKFIPAKEKKIKNKVKNNEYFDK 407

Query: 371 --VQFS---RLRCTQRGMTMLDSVIANLA 394
             V+ S   RLR T+RGM + + V     
Sbjct: 408 KIVENSYEIRLRLTKRGMLLANDVFVEFI 436


>gi|260424610|ref|ZP_05732649.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister invisus DSM 15470]
 gi|260402529|gb|EEW96076.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Dialister invisus DSM 15470]
          Length = 348

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 183/351 (52%), Gaps = 10/351 (2%)

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
           ++F+ +   EM+   +L   +   +++ GGGTPS++    +  I++ + + + +  N EI
Sbjct: 3   DSFLDALAQEMENKSKLFEDKLCDTVYLGGGTPSVLSGNQLKSIIEALHRYFHIYENAEI 62

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-I 167
           T+E NP  +  +  +     GVNRIS+GVQ+  ++ L  +GR H A+EA  A++ A    
Sbjct: 63  TMEMNPCDMTESYLKNALVQGVNRISVGVQTNRDELLVKIGRRHTAAEAEKAVNRAFKLG 122

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           F  +S DL+  LP+QT+  +E  L+ A+   V H+S+Y L +E+GT F +M   G L  P
Sbjct: 123 FRNISIDLMCELPRQTVDDFEKTLKYAVHLPVTHMSVYSLILEEGTRFSQMASRGILARP 182

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
           SEN +  +Y     I   +G   YEIS+ +  G +S HN  YW+  DY+G+GP A SR+ 
Sbjct: 183 SENDSWAMYQAMCRILPHYGFERYEISSFARTGFQSAHNRKYWKLEDYLGLGPSACSRIG 242

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                       +   + + +  +   V EK  LS +++ +EF  +GLR++EGI+ + + 
Sbjct: 243 ----HERWENISNLRLYEERLAADE-PVEEKISLSPKEEMEEFAFLGLRMKEGINSRKFY 297

Query: 348 MLAGRNLDIE---CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              G+ +        + L ++  I  +    ++ T +G  + + V     +
Sbjct: 298 QRYGKEIMEVYGSVVKKLVKEKMI-FLNNGNIQMTYKGAALGNYVFEQFLL 347


>gi|254191317|ref|ZP_04897821.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938989|gb|EDO94659.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 481

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 120 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 239

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 240 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 298

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 299 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 357

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 358 GTSYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 413

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 414 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 461


>gi|126439546|ref|YP_001059721.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 668]
 gi|167903538|ref|ZP_02490743.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei NCTC
           13177]
 gi|167911789|ref|ZP_02498880.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 112]
 gi|126219039|gb|ABN82545.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 668]
          Length = 483

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|148224309|ref|NP_001091605.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Bos taurus]
 gi|187611408|sp|A5D7B1|RSAD1_BOVIN RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|146186779|gb|AAI40492.1| RSAD1 protein [Bos taurus]
          Length = 442

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 199/343 (58%), Gaps = 6/343 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              GS    +YVHWP+C K+C YC+FN ++ R  V +    +  + E Q + +L+G R +
Sbjct: 33  PAPGSQRAALYVHWPYCEKRCSYCNFNKYIPRG-VDEAALRRCLVIEAQTLLRLSGVRRV 91

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVN
Sbjct: 92  ESVFFGGGTPSLASPHTVAAVLEAVAQAAHLPADSEVTLEANPTSASGSRLAAFGAAGVN 151

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+S+G+QSL++  L+ LGR H+A +A+  +  A+ +FP R+S DL+  LP Q +  W  +
Sbjct: 152 RLSIGLQSLDDTELQLLGRTHSARDALQTLAEAQRLFPGRVSVDLMLGLPAQQVGPWLRQ 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ  L    DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   
Sbjct: 212 LQGLLRCCDDHVSLYQLSLERGTTLFTQVQQGALPAPDPELAAEMYQEGRAVLREAGFRQ 271

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLK 306
           YE+SN +  GA S HN  YW+ G Y+G+GPGAH R      G H     I+   P+SW+K
Sbjct: 272 YEVSNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFIPQGAGGHTREARIQTLEPDSWMK 331

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            V   GH    +  LS  +  +E L MGLR   GI+ + W+  
Sbjct: 332 EVMLFGHGTRRRVPLSELELLEEVLAMGLRTDVGITHQHWQQF 374


>gi|126454666|ref|YP_001067005.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1106a]
 gi|167739458|ref|ZP_02412232.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 14]
 gi|167846571|ref|ZP_02472079.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei B7210]
 gi|242314161|ref|ZP_04813177.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
 gi|126228308|gb|ABN91848.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106a]
 gi|242137400|gb|EES23802.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
          Length = 483

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GTSYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|170699820|ref|ZP_02890852.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
 gi|170135272|gb|EDT03568.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria IOP40-10]
          Length = 463

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/414 (21%), Positives = 154/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYLRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +    +A ++      + ++   + E +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDAEMAELMATTRDYFVLAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PARLVHLRNIGFNRLSLGVQDFDPVVQQAINRVQPLAMTSDLMSAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D IG G  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPTDELVRAQRNGTLQRNFQGYSTRADTDLIGFGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTADDRLRRDVITQLMCNLELPFSH 394

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G        R L      ++ G +  V   RL     G  ++ ++    
Sbjct: 395 IEAAHGIRFADHFARELDALRGFEQDGLLT-VAGDRLTIHPAGRMVVRNIAMAF 447


>gi|325526304|gb|EGD03915.1| coproporphyrinogen III oxidase [Burkholderia sp. TJI49]
          Length = 463

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/414 (21%), Positives = 158/414 (38%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N      +     ++     EM  
Sbjct: 42  DYVRAASD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R    +     +  AR   F  +S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPVVQRAINRIQPLAMTADLLAAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVSVFARTLETIIELAPDRLSVFGYAHMPQ-LFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D +GIG  +  +
Sbjct: 279 LAIEMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLVGIGASSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+ + +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTPDDRLRRDVITQLMCNLELPFSH 394

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G         +++  R  +R G +  +   RL     G  ++ ++    
Sbjct: 395 IEAAHGIRFAEHFARELDALRPFERDGLLT-IAGDRLTIHPAGRMIVRNIAMAF 447


>gi|289548255|ref|YP_003473243.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
 gi|289181872|gb|ADC89116.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
          Length = 379

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 116/375 (30%), Positives = 190/375 (50%), Gaps = 22/375 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC +KCPYCDF S + R+ +    ++   L E     + T    + +I+FGGG
Sbjct: 4   GLYIHIPFCRQKCPYCDFVS-LTRWNITFHQYLDLLLRE--LELRFTENWRVKTIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL++ + +A  +  + +   V    EIT+E NP      ++     AGVNRIS+G QS
Sbjct: 61  TPSLLDSKTLASFVSKLVQR--VGDVREITVECNPEDYTERDWGLLLSAGVNRISIGAQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+ LGR+H+   +I ++  A    F  ++ D+IYA P QT+   E EL+      
Sbjct: 119 FLPKGLKILGRDHSVYHSIRSVLTAYKAGFRNINVDIIYAYPGQTLEDLEEELKVVRDLP 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS Y LT  + TLF  M K G L +PS+    D++ L        G   YE+SN + 
Sbjct: 179 IAHLSAYMLTPYEDTLFGIMVKKGQLEMPSDERVADMFLLLSEALEELGFVHYEVSNFAK 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G + +HNL YW +G+++G+G  A S V+       +   ++ E +   + +    V   
Sbjct: 239 KGYQCMHNLLYWTHGEFVGLGVSAWSFVENKR----MGNTRNLELYRDALMEKKLPVETV 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  ++   + L +GLR   G+  +                +  R+ F+  V+  RLR 
Sbjct: 295 EELKGKELLFDRLFVGLRTAYGVEEELL----------PLIPSHIREFFV--VEEGRLRL 342

Query: 379 TQRGMTMLDSVIANL 393
           T++G  +++S++  L
Sbjct: 343 TKKGWLLMNSILLEL 357


>gi|167825064|ref|ZP_02456535.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 9]
 gi|217421117|ref|ZP_03452622.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|226199993|ref|ZP_03795543.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
 gi|217396529|gb|EEC36546.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|225928049|gb|EEH24086.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
          Length = 483

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMCALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|237813114|ref|YP_002897565.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
 gi|237504218|gb|ACQ96536.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
          Length = 483

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|134277306|ref|ZP_01764021.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
 gi|134250956|gb|EBA51035.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
          Length = 483

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAEHNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDCAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|167720467|ref|ZP_02403703.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei DM98]
          Length = 483

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 152/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++      ++M +     +   + 
Sbjct: 360 GTSYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREVIMTVMCSTPVDCAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|117922547|ref|YP_871739.1| coproporphyrinogen III oxidase [Shewanella sp. ANA-3]
 gi|117614879|gb|ABK50333.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           ANA-3]
          Length = 446

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/406 (21%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    +++ + +GGGTP+ + P+ I  + D I  N+  ++  E +IE +P  +E++   
Sbjct: 87  PLFKHYTVTQMHWGGGTPTFLNPEQILKLTDLIKANFNFAAEGEFSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 207 TPETFAATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 265

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 266 LTGAGYQYIGMDHFAKPDDELAKLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 325

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 326 AQN----QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKMDEKL 381

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G   +     +L           ++     ++  +  G  ++ ++ 
Sbjct: 382 GIKFEEYFAEDLKLLQTFIDDKLVDVTD-RKITISPTGRLLIRNIC 426


>gi|291296099|ref|YP_003507497.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           ruber DSM 1279]
 gi|290471058|gb|ADD28477.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           ruber DSM 1279]
          Length = 384

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 115/366 (31%), Positives = 181/366 (49%), Gaps = 25/366 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   CPYCDF+  VRRY    E +++    E + + +      +++++ GGG
Sbjct: 8   HLYLHVPFCPTICPYCDFH-VVRRYGDVVEAYLKRLAQEARGLFEQHPG-PLTTLYLGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    +  +   +   W +    E+T+EANP ++     +  R+ GVNRISLGVQS
Sbjct: 66  TPSFLRSHELEALFRALP--WNI-EAAEVTLEANPGTLNPERLRLLRELGVNRISLGVQS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L+ LGR H    A+ A+ ++     R S DLI  LP Q     E +L +A +  V
Sbjct: 123 FQDSVLKTLGRAHGRIGALRAVEMSLEAGFRTSIDLILGLPGQDA---EADLAQAAALGV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y L +E GT F         + P  +     + L Q +    GL  YE+SN +  
Sbjct: 180 EHVSAYTLQVEPGTPFA-----LKGLAPDPDAEAQAFELAQHLLGRAGLTRYEVSNFARP 234

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP--ESWLKMVRKNGHAVVE 317
           G ES HNL YWR   + G+GPGA  ++      +      +P    WL+         + 
Sbjct: 235 GGESRHNLAYWRNAFWGGLGPGATGQLAGLEPHIFAVRYTNPPLPRWLQ----GEEPSL- 289

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFS 374
            E +S  +   E LM+GLRL +G+ ++  E  +G  +    E   + L  QG++  V+  
Sbjct: 290 -EPISRLEHVKESLMLGLRLAQGVDLELLEQRSGLEVWPALEPAVQQLSSQGWLV-VEQK 347

Query: 375 RLRCTQ 380
           R+R T 
Sbjct: 348 RIRATD 353


>gi|10433428|dbj|BAB13962.1| unnamed protein product [Homo sapiens]
          Length = 442

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 218/380 (57%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + +++E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAVLEAVAQAAHLPADLEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRTHSACDALRTLAEARGLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H  E+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQCEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+G+GPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTHNWTYWQCGQYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTM 385
           G + ++    LRC+  G+ +
Sbjct: 397 GLL-QLDHRGLRCSWEGLAV 415


>gi|225850864|ref|YP_002731098.1| oxygen-independent coproporphyrinogen III oxidase [Persephonella
           marina EX-H1]
 gi|225646551|gb|ACO04737.1| oxygen-independent coproporphyrinogen III oxidase [Persephonella
           marina EX-H1]
          Length = 461

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 156/404 (38%), Gaps = 30/404 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +    L +Y H PFC   C +C  N  + R K   + +++    EM  M  L    R 
Sbjct: 50  SNKRKTPLSLYFHIPFCESACHFCGCNVIITRRKEVVQPYLEHLFKEMDIMCSLLDRSRK 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +E      +++ I K +    N E++IE +P  V        RK G 
Sbjct: 110 VVQLHWGGGTPNYLEDDQTVKLMEEIKKRFDFDENAEMSIEVDPRHVTKERIFLLRKIGF 169

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+Q    +    + R          +   R   F  ++ DLIY LP QT+  +  
Sbjct: 170 NRISFGIQDFNPKVQEAVNRIQPEELIFNVMSWIREAGFESVNIDLIYGLPYQTLETFTE 229

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGL 248
            +++ +    D ++ +           ++ +  D   LP     +++  +T    +  G 
Sbjct: 230 TVEKVIKLNPDRIANFNFAYVP--WLKRLQRRIDESKLPPPAEKLEILKMTIEKLTDAGY 287

Query: 249 HAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
               + + +    E        +LH  N+  Y      + IG G  + S +    +    
Sbjct: 288 LFIGMDHFAKPDDELAVAQRERTLHR-NFQGYTTHAEAELIGFGATSISML----YDAYA 342

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              K  + + +M+ +    +     L+ +      ++M L     +  K+ E   G + D
Sbjct: 343 QNHKKLKDYYEMIEEGKLPIERGIILTQDDIIRRDVIMRLMSHFQLYKKEIEEKYGIDFD 402

Query: 356 IECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                     + L++ G + ++   R+  T  G  ++ ++    
Sbjct: 403 QYFASEMEELKELEKDGLL-KLYPDRIDVTPAGRLLIRNIAVTF 445


>gi|296476503|gb|DAA18618.1| radical S-adenosyl methionine domain-containing protein 1,
           mitochondrial precursor [Bos taurus]
          Length = 442

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 130/343 (37%), Positives = 198/343 (57%), Gaps = 6/343 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              GS    +YVHWP+C K+C YC+FN ++ R  V +    +  + E Q + +L+G R +
Sbjct: 33  PAPGSQRAALYVHWPYCEKRCSYCNFNKYIPRG-VDEAALRRCLVIEAQTLLRLSGVRRV 91

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S+FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVN
Sbjct: 92  ESVFFGGGTPSLASPHTVAAVLEAVAQAAHLPADSEVTLEANPTSASGSRLAAFGAAGVN 151

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           R+S+G+QSL++  L+ LGR H+A +A+  +  A+ +FP R+S DL+  LP Q +  W  +
Sbjct: 152 RLSIGLQSLDDTELQLLGRTHSARDALQTLAEAQRLFPGRVSVDLMLGLPAQQVGPWLRQ 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ  L    DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   
Sbjct: 212 LQGLLRCCDDHVSLYQLSLERGTTLFTQVQQGALPAPDPELAAEMYQEGRAVLREAGFRQ 271

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLK 306
           YE+SN +  GA S HN  YW+ G Y+G+GPGAH R       G  R A      P+SW+K
Sbjct: 272 YEVSNFARNGALSTHNWTYWQCGQYLGVGPGAHGRFIPQGAGGHTREARIQTLEPDSWMK 331

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            V   GH    +  LS  +  +E L MGLR   GI+ + W+  
Sbjct: 332 EVMLFGHGTRRRVPLSELELLEEVLAMGLRTDVGITHQHWQQF 374


>gi|297622635|ref|YP_003704069.1| oxygen-independent coproporphyrinogen III oxidase [Truepera
           radiovictrix DSM 17093]
 gi|297163815|gb|ADI13526.1| oxygen-independent coproporphyrinogen III oxidase [Truepera
           radiovictrix DSM 17093]
          Length = 380

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 112/385 (29%), Positives = 179/385 (46%), Gaps = 22/385 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
                +Y+H PFC K CPYCDF+  +RR++     +++    E + +        + +++
Sbjct: 3   PPPRALYLHVPFCPKVCPYCDFHK-MRRHEGLVAAYLERLQGEARALYAAFPG-PLDTLY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +    +A +   +   W   + +E T+EA+P + +    + +R  G +R+S+
Sbjct: 61  FGGGTPSHLTDDELAHLTRTLEATWGFPAALETTLEADPKTFDRGRLETFRALGFDRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS ++  L FLGR H   E + A+ +A      +S DLI A+P Q        L    
Sbjct: 121 GVQSTQDAVLAFLGRQHTGREGLEAVEMALAAGFTVSADLITAVPGQDAAAD---LHALA 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V HLS+Y LTIE  T F +     D     E+   + Y L   +  A+GL  YE+S+
Sbjct: 178 QTGVAHLSVYTLTIEPYTPFARRGVTVD-----EDKEAEDYALASEVLGAYGLVRYEVSS 232

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP--ESWLKMVRKNGH 313
           H+  G E+ HN  YWR   ++ +GP A + V V    +      +P  ++WL        
Sbjct: 233 HARPGFEAKHNSVYWRGDPFLALGPAAAAFVPVSHGGLLGERRTNPPIKAWLAGAPPEVL 292

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIER 370
            V    ++       + LM GLR   G+ +      AG ++          L+R G +ER
Sbjct: 293 PVGSAAYV------QDVLMTGLRTARGLDLAALSARAGFDVAAHYQGVLARLERVGLLER 346

Query: 371 VQFSRLRCTQRGMTMLDSVIANLAV 395
                LR T+ G+  L+ V   L  
Sbjct: 347 A-GGFLRATEAGLLQLNGVTRALFA 370


>gi|226327582|ref|ZP_03803100.1| hypothetical protein PROPEN_01453 [Proteus penneri ATCC 35198]
 gi|225204108|gb|EEG86462.1| hypothetical protein PROPEN_01453 [Proteus penneri ATCC 35198]
          Length = 458

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/406 (21%), Positives = 168/406 (41%), Gaps = 26/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +           L +Y+H PFC K C +C  N  + R+K   + ++     E+    +
Sbjct: 39  ADFIKATQRYPERPLSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRAR 98

Query: 65  LTGPRSISSIFF-GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
               R ++ + + GGGTP+ ++ Q I+ ++  + +++    N E++IE +P  +E++   
Sbjct: 99  YFKDRKVTQMHWGGGGTPTFLDKQQISRLVSLLRQHFDFVDNAELSIEIDPREIELDVID 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+S+GVQ   ++  + + R  + +   A +  AR   F   S DLIY LPKQ
Sbjct: 159 HLRNEGFNRLSMGVQDFNKEVQQKVNREQDEAFIFALVERAREVGFHSTSIDLIYGLPKQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L+R +  + D LS++        LF    K  D  LP     +++   T S 
Sbjct: 219 TKESFAFTLKRVIELSPDRLSVFNYAHLPN-LFAAQRKIKDEDLPLAEEKLEILQETIST 277

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            + +G     + + +    E        + + N+  Y      D +G+G  A S +    
Sbjct: 278 LTTNGYQFIGMDHFAKPDDELAVAQRKGILHRNFQGYTTHEECDLLGMGVSAISMLGD-- 335

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                  EK  + +   V   G+A+     L+ +      ++  L     +   D E + 
Sbjct: 336 --NYAQNEKVLKEYYARVNSEGNALWRGLSLTHDDCIRRDVIKTLICNFNLHFSDIEKMH 393

Query: 351 GRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
                   + +L+        G +E      ++ T RG  ++ ++ 
Sbjct: 394 DIVFHDYFKEDLELLVPMKDDGLVEITVDG-IQVTPRGRLLIRNIC 438


>gi|332264560|ref|XP_003281303.1| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial [Nomascus leucogenys]
          Length = 442

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 139/383 (36%), Positives = 217/383 (56%), Gaps = 19/383 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH P+C K+C YC+FN ++ R  V +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHGPYCEKRCSYCNFNKYIPR-HVEEAAMQKCLVTEAQTLLRLSGVQWVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTLAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L + 
Sbjct: 160 LDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVELWLGQLQELLHHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQL++E+GT  +   + G L  P   +  ++Y   ++I    G H YE+SN + 
Sbjct: 220 DDHLSLYQLSLERGTALFTQVQRGALPAPDPELTAEMYQRGRAILREAGFHQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S  N  YW+ G Y+GIGPGAH R       G  R A      P++W+K V   GH 
Sbjct: 280 NGALSTPNWTYWQCGQYLGIGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L +GLR   GI+ + W+            G N +++    L  +
Sbjct: 340 TRKRVPLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLWDMFGANKEVQ---ELLER 396

Query: 366 GFIERVQFSRLRCTQRGMTMLDS 388
           G + ++    LRC+  G+ +LDS
Sbjct: 397 GLL-QLDHRGLRCSWEGLAVLDS 418


>gi|114049487|ref|YP_740037.1| coproporphyrinogen III oxidase [Shewanella sp. MR-7]
 gi|113890929|gb|ABI44980.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           MR-7]
          Length = 446

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/406 (21%), Positives = 171/406 (42%), Gaps = 29/406 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+A EN+     S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+    
Sbjct: 31  LTAIENS----KSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L    +++ + +GGGTP+ + P+ I  + D I  N+  ++  E +IE +P  +E++   
Sbjct: 87  PLFKHYTVTQMHWGGGTPTFLNPEQILKLTDLIKANFNFAAEGEFSIEVDPREIELSMLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP Q
Sbjct: 147 TLKEAGFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   +QR L  + D LS++         F    K  D  LPS    +++ + T   
Sbjct: 207 TPETFAATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIET 265

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     + + +           E   + N+  Y      D +G+G  + S++    
Sbjct: 266 LTGAGYQYIGMDHFAKPDDELAKLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGDCY 325

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   
Sbjct: 326 AQN----QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKMDDKL 381

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G   +     +L           ++     ++  +  G  ++ ++ 
Sbjct: 382 GIKFEEYFAEDLKLLQTFIDDKLVDVTD-RKITISPTGRLLIRNIC 426


>gi|150020836|ref|YP_001306190.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho melanesiensis BI429]
 gi|149793357|gb|ABR30805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho melanesiensis BI429]
          Length = 375

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/393 (28%), Positives = 179/393 (45%), Gaps = 29/393 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           KYLS    N+     N + +Y+H PFC KKC YCDF S+    +   EN+I++ +TE++ 
Sbjct: 3   KYLSDLIGNL-----NKISLYIHIPFCKKKCYYCDFVSYT---EGSVENYIEALITELKL 54

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +    + I +++ GGGTPS I    I  ++  + K   +    E TIE NP S +   
Sbjct: 55  YEKYLE-KGIKTLYIGGGTPSYINEHYIEKLVMFLNKYLQLE---EFTIEVNPDSFDSEK 110

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
              Y+  G NRISLG+QSL++  L+  GR HN+ +A  A  +A+ IF  ++ D I  LP 
Sbjct: 111 AYFYKSLGTNRISLGIQSLDDTVLKRAGRTHNSYQAYKAYEIAKGIFNNINVDFIIGLPG 170

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++    E  +         H+S+Y L I +GT   K+ K         + + + ++    
Sbjct: 171 ESWKSIEKIVDFIRLEHPKHISVYLLEIHEGTFLSKIMKK------IPDESFERHDALLD 224

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
                G   YEISN +     S HNL YW   +YIG+G  A        +          
Sbjct: 225 FLKTEGYERYEISNFALNENYSKHNLVYWANREYIGVGLSAGGHFDNFRYNNVSDF---- 280

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           +S+   ++        +   + E++  E + M LR + GI  K    L   N +IE   N
Sbjct: 281 KSYFLKLKNGKFPYGYQSKNTKEKEILETIFMMLRTKWGIDKK----LVHINFEIENILN 336

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             ++ F     F   R +++GM       + L 
Sbjct: 337 TLKRKF---TFFDGTRLSEKGMDFSSMFFSELL 366


>gi|288818591|ref|YP_003432939.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787991|dbj|BAI69738.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|308752182|gb|ADO45665.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
          Length = 381

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 116/376 (30%), Positives = 183/376 (48%), Gaps = 22/376 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  KCPYCDF S      +  E++++  + E++  +      S+ +++ GGG
Sbjct: 4   SLYVHVPFCSYKCPYCDFVSFASSA-ISHEDYLKLLIKELELYK--GESFSLKTLYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSLI P+     L  +  +  +S   E TIE NP +   + F+  +  G+NR+S+GVQS
Sbjct: 61  TPSLISPELYREFLKAL--DVDLSQLEEFTIECNPETYREDEFKKMKDLGLNRVSVGVQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ LR LGR H   E+I  I  A +     +S DLIYA P QT+   + EL+      
Sbjct: 119 FKEKGLRMLGRRHTVKESIDCIMSAYHAGIENISIDLIYAYPNQTLKDLKEELRFIEDLP 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V H S Y LT  + TLF  +   G L LP  +   D+Y       S+ G   YEISN + 
Sbjct: 179 VKHASCYILTPYEDTLFGYLLSKGKLQLPDADKIADMYLFLVEKLSSLGFDHYEISNFAM 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL+YW   +++G+G  A S V+     V     K+ + +  +V        + 
Sbjct: 239 PGYECRHNLSYWLGKEFLGLGVSAWSFVRD----VRFGNTKNLDKYATLVLMGRKPAHQC 294

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L  +++  + L   LR + GI  K++  L   +L    E           +    +R 
Sbjct: 295 EVLKGKRKLQDTLFTRLRTKWGIP-KEYANLIPEDLSEFFE-----------ITNESIRL 342

Query: 379 TQRGMTMLDSVIANLA 394
            + GM +++ ++  + 
Sbjct: 343 KEEGMLLINEILLRVF 358


>gi|260654645|ref|ZP_05860135.1| putative coproporphyrinogen dehydrogenase [Jonquetella anthropi
           E3_33 E1]
 gi|260630661|gb|EEX48855.1| putative coproporphyrinogen dehydrogenase [Jonquetella anthropi
           E3_33 E1]
          Length = 381

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 108/395 (27%), Positives = 178/395 (45%), Gaps = 20/395 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +    +   G GS   G+Y+H PFC  KCPYC F S     +   + ++     E+  + 
Sbjct: 1   MRTAADLFRGTGSGPCGLYLHVPFCRGKCPYCSFYSRPLTARA-LDEYLTGVERELGILA 59

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                  + +++ GGGTPS +       +   + +     S+ E T EANP S+      
Sbjct: 60  SRYSG-KLQTVYIGGGTPSALPIDAWRRLFAAL-EWLKRESSAEFTAEANPESLTDELIG 117

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
            ++  GVNR+SLGVQSL+++ L  L R+H+A +A+        +  R+S D+++ LP QT
Sbjct: 118 LWQDHGVNRVSLGVQSLDDRILSGLSRHHSAVQALERTAQCVRLGFRVSCDVMFGLPGQT 177

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   ++R +S  V HLSLYQL+IE G+ ++                   Y   Q   
Sbjct: 178 LRNFAETVKRLVSTGVRHLSLYQLSIEPGSYWWAHRPK------ELGGGYASYRWAQWYL 231

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEI++ +  G ES HN  YW   + +  GP A    +        ++ +    
Sbjct: 232 PRQGFRQYEIASFAGPGEESRHNQLYWTRANVLPAGPSAWGYWEGCRTCGEPTVGR---- 287

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W   +      +   E L   + A E +++G R+ +GI +  WE   GR    E ER L 
Sbjct: 288 WAADLAAGRLPLAGWEELKGGRAASEAVILGTRMAQGIDLASWESQFGRRARGELERRLS 347

Query: 364 RQGFIER----VQFSRLRCTQRGMTMLDSVIANLA 394
               +      V+  RL  T +GM + +++ + L 
Sbjct: 348 ---LLPPDCFAVRAGRLSLTPKGMRLGNALWSELL 379


>gi|59710687|ref|YP_203463.1| coproporphyrinogen III oxidase [Vibrio fischeri ES114]
 gi|59478788|gb|AAW84575.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Vibrio fischeri ES114]
          Length = 457

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/405 (20%), Positives = 158/405 (39%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++   T      L +Y+H PFC K C +C  N  + R+    + ++ S   E++    
Sbjct: 39  AEFDMACTQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + FGGGTP+ +       ++  +   +      EI+IE +P  +E++    
Sbjct: 99  LFTERKVTQLHFGGGTPTFLTKVQFTRLMTLLRGEFQFEEGAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  + + R+ +    I  +  A++  F   + DLIY LPKQ+
Sbjct: 159 LRDEGFNRLSIGVQDFNKEVQQLVNRDQDEDFIIQMVQRAKDLGFRSTNLDLIYGLPKQS 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++R L      LS++       TLF    K  D  LP+    + +   T    
Sbjct: 219 ADSLANTIKRVLEMEPGRLSVFNYAHMP-TLFAAQRKIKDADLPAPAEKLVMLQETIETL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFALPDDELAVAQREGVLHRNFQGYTTQGECDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V +  HA+     L ++      ++  L     +  K  E    
Sbjct: 338 QN----KKDLKEYYAQVDEQRHALWRGVALDNDDLIRREVIKQLICNFTLDTKAIEAEFN 393

Query: 352 RNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            + D     +            +   +  R+    RG  ++ ++ 
Sbjct: 394 LDFDTYFAEDIKLLQTFINDELVTMHE-GRIDVELRGRLLIRNIC 437


>gi|78065490|ref|YP_368259.1| coproporphyrinogen III oxidase [Burkholderia sp. 383]
 gi|77966235|gb|ABB07615.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia sp. 383]
          Length = 463

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/416 (20%), Positives = 155/416 (37%), Gaps = 34/416 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            ++     EM  
Sbjct: 42  DYLRAASD--PGASSSELSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLDQLKREMAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDDETAELMAATREHFALAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPVVQQAINRIQPLAMTADLLSAARTTGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVSVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D +G G  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQKNGTLQRNFQGYSTRADTDLVGFGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+ + +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTPDDRLRRDVITQLMCNLDLPFSH 394

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
            E   G         +++  R  +R G +        R T    G  ++ ++    
Sbjct: 395 VEAAHGIRFADHFARELDALRPFERDGLLTIAAD---RLTIHPAGRMVVRNIAMAF 447


>gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6]
 gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
          Length = 487

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 83/399 (20%), Positives = 154/399 (38%), Gaps = 30/399 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSI 71
           G     L VYVH PFC   C YC  N  V R       +I +   E++ + Q L   + +
Sbjct: 76  GGAGGPLSVYVHVPFCESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRV 135

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S + FGGGTP+ +    +  ++  + +++ +  + E +IE +P +V        ++ G N
Sbjct: 136 SQLHFGGGTPTFLSDAELDRLMGELRRHFHIEPHGEYSIEIDPRTVSRERLAHLKELGFN 195

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ  +    + + R     +  A +  AR   F  ++ DLIY LPKQT   +   
Sbjct: 196 RVSFGVQDFDADVQKAVHRVQPFEQVEALMKDARELGFHSINVDLIYGLPKQTPESFART 255

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++      D +++Y         F    +     LP  +  + + +   S   +HG   
Sbjct: 256 VRQVAGLRPDRIAMYGYAHLPQ-RFKPQRRIVTEELPRGSDRIGMLSQAISGFISHGYQY 314

Query: 251 YEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +           +   + N+  Y      D I +G  A  R+     + A    
Sbjct: 315 IGMDHFALPEDGLAQAKRQGRLHRNFQGYSTQADCDLIALGVSAIGRIGATYSQNA---- 370

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK--------DWEMLA 350
           K  + +   + +    VV    L+ +      ++M +     +S +        D +   
Sbjct: 371 KTLDDYYDSLNRGELPVVRGLALTRDDLVRRAVIMSIMCHGRLSYESVALAHLIDVKTYF 430

Query: 351 GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              L+     +L  QG +  +       T  G   + SV
Sbjct: 431 ATELEALV--DLADQGLLT-LDPDGFELTPLGWYFVRSV 466


>gi|218282266|ref|ZP_03488565.1| hypothetical protein EUBIFOR_01147 [Eubacterium biforme DSM 3989]
 gi|218216734|gb|EEC90272.1| hypothetical protein EUBIFOR_01147 [Eubacterium biforme DSM 3989]
          Length = 359

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/377 (27%), Positives = 177/377 (46%), Gaps = 24/377 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             YVH PFC   C YCDF   +++ +    ++ +  + E+Q  +      S+ +++FGGG
Sbjct: 4   SAYVHIPFCDSICAYCDF-VRIQKNESFFSSWKEKLIQEIQEYK----ISSLHTLYFGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+   +   I     +N       E T+E NP S++ +    Y   GVNRISLGVQS
Sbjct: 59  TPSLLSVDDFVSI-----RNCFPKDIEEFTVECNPESLDEDKLNAYVALGVNRISLGVQS 113

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  L+   R H AS+AI+ I   +       S DLI+ LP QTM   + ++   LS  
Sbjct: 114 FKDDLLKVCRRTHTASQAISVIENIKKSSVSTFSIDLIFGLPNQTMEDVKKDIFTFLSLD 173

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + HLS+Y L IE+ ++F K      +     ++  D++        A G   YEIS+   
Sbjct: 174 IPHLSIYSLQIEENSIFGK----TGVEPCDSDLEADMFEYITKTLEAAGYIHYEISSFCK 229

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HNL YW+  D+ G G GA  R+    +    S++++              V   
Sbjct: 230 PGHYSKHNLAYWQDKDFYGFGCGASGRLDGIRYDNTTSLKEY-------CSLGPCPVYID 282

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L   ++  + +MM LR + G+++K+W +    +      + L +       +   +  
Sbjct: 283 ETL--AERGMDAIMMALRTKFGLNIKEWNLKYQSDFKEHYAQVLDKYREYFCFEGECIYL 340

Query: 379 TQRGMTMLDSVIANLAV 395
              G+ +L++++ +  +
Sbjct: 341 KDAGLEILNTILVDFML 357


>gi|149198936|ref|ZP_01875977.1| coproporphyrinogen III oxidase [Lentisphaera araneosa HTCC2155]
 gi|149137931|gb|EDM26343.1| coproporphyrinogen III oxidase [Lentisphaera araneosa HTCC2155]
          Length = 375

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 183/379 (48%), Gaps = 25/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C YC   S V   K  ++ ++       +    L    ++ +IF GGG
Sbjct: 9   SLYIHVPFCKNICDYCTLYSVVENSKEIRQQYLSKIQN--ELNASLEQLDNLKTIFIGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    +  +L  I      S   E T+E NP+S+     Q  +  GVNR+S G QS
Sbjct: 67  TPNALSSDELEQLLHSIQALKIPS---EFTVECNPASITEEKLQLMQNYGVNRLSFGGQS 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              ++ + LGR     E   AI LA+   F R++ DLIYA+P QT+  W+ ++Q+ LS  
Sbjct: 124 TSRKTRKALGRRTGDVELFKAIDLAQKFGFKRINVDLIYAVPGQTLADWQYDVQQVLSQG 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + H S Y L +E+G    K  K+ D     +++AV++Y+L + +    GL  YE+SN++ 
Sbjct: 184 IRHFSAYSLILEEGAEITKRIKETD-----DDLAVEMYHLCEDLLKEAGLERYEVSNYAV 238

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G E  HNL  W    Y+G+GP A S        +  + +   ++WL        A +++
Sbjct: 239 PGEECRHNLGIWHGAKYLGLGPAAASF----DGLLRWTQKADLKAWL----NGEKAKLDE 290

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSR 375
             L  +++  E L  G R + G   +    L G  +  E +  L +   QG +E    S 
Sbjct: 291 IPL--KERVAEVLAFGFRTKMGWQKELLHSLYGSEVLNEYKDILDKLVIQGLLEETA-SY 347

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +R T++G+   D + + L 
Sbjct: 348 IRATEQGLLFADEIASVLI 366


>gi|172059862|ref|YP_001807514.1| coproporphyrinogen III oxidase [Burkholderia ambifaria MC40-6]
 gi|171992379|gb|ACB63298.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MC40-6]
          Length = 463

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 85/414 (20%), Positives = 154/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYLRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +    +A ++      + ++   + E +IE +P +V 
Sbjct: 100 QATLFDPARPVTQLHWGGGTPTFLSDAEMAELMATTRDYFVLAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PARLVHLRNIGFNRLSLGVQDFDPIVQQAINRVQPLAMTADLMSAARATGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D +G G  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPTDELVRAQRNGTLQRNFQGYSTRADTDLVGFGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALAAGRLPIARGVRLTADDRLRRDVITQLMCNLELPFSH 394

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G        R L      ++ G +  +   RL     G  ++ ++    
Sbjct: 395 IEAAHGVRFADHFARELDALRGFEQDGLLT-IAGDRLTIHPAGRMVVRNIAMAF 447


>gi|134094857|ref|YP_001099932.1| coproporphyrinogen dehydrogenase [Herminiimonas arsenicoxydans]
          Length = 465

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 85/410 (20%), Positives = 160/410 (39%), Gaps = 26/410 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL       T  G   L +YVH PFC   C YC  N  V R +     ++     E++ 
Sbjct: 28  DYLQTVVGLRTRGGMWPLSLYVHIPFCESVCHYCSCNKVVTRDRSKAATYLSYLKHEIEM 87

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L      I  +  GGGTP+ +    +  ++  + +++  +S+   E  IE +P +V 
Sbjct: 88  QGNLFAGMNQIEKLHIGGGTPTYLNDAQMGELMAHLRRHFRFASDFDGEYAIEVDPRTVT 147

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           V      RK G NRIS+GVQ  +    + + R  +  + +  I  AR   F  +S DLIY
Sbjct: 148 VERIHALRKQGFNRISIGVQDFDPDVQQAVNRIQSEQDTLNIIRAAREACFRSVSIDLIY 207

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +      L + ++ + D +++Y   + +  +F    +  +  LPS +  +++++
Sbjct: 208 GLPKQNVITMAQTLNKVINASPDRIAVYNY-VHRPNMFKPQRRIDEDDLPSLDARLNMFS 266

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
           L     +  G     + + +           +   + N+  Y      + +  G    S 
Sbjct: 267 LCIRRLTDAGYVYIGMDHFAKPSDDLAIAQRQGRLHRNFQGYSSHAEHNLVAFGVSGISA 326

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V       A    K  + + + + +N   +V    LS +      ++  L     +S+  
Sbjct: 327 VAATYSENA----KTLDEYYERIEQNELPIVTGVKLSMDDLLRRIIIQMLMCNFELSIDS 382

Query: 346 WEMLAGRNLDIECERNLQRQGFIER-----VQFSRLRCTQRGMTMLDSVI 390
            E+             L +   +E      V    +  T +G  ++ +V 
Sbjct: 383 IELAYPITFKTYFAAELDKLHELEDNGLVTVDDEWISVTPKGRLLIRNVC 432


>gi|332307656|ref|YP_004435507.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332174985|gb|AEE24239.1| oxygen-independent coproporphyrinogen III oxidase [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 465

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 154/405 (38%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
                 +    + +L +YVH PFC + C YC  N  V R +   + ++   L E+    +
Sbjct: 48  QDLRRAIEMSKNKTLSLYVHIPFCHRLCYYCGCNKIVTRLQSKADIYLDYLLKEIALQAE 107

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           + G + ++ +  GGGTP+ +    +  ++DG+  ++  + + +++IE +P ++       
Sbjct: 108 VLGHKPVTQLHLGGGTPNFLTDAQLQRLVDGLKGHFNFTDDAQLSIEIDPRNMTPQRIDS 167

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
             K G NR+S+G+Q  +      + R  ++      I  A+   F  ++ DLIY LP QT
Sbjct: 168 MAKMGFNRLSIGIQDTDPTVQEAINRVQSSELIERLIKRAKEKGFRSINLDLIYGLPFQT 227

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L       ++ +SL+         F    K     LP+      L        
Sbjct: 228 PDTFARTLDFVHKMQIERVSLFSYAHLPE-RFAAQRKLATDALPNSEQKFQLMRQAVETL 286

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSH 291
            A+G     I + +    E   +  N     N+  Y      D +G+G  A S +     
Sbjct: 287 CANGYQFIGIDHFALPSDELAKAQQNKVLGRNFQGYTTDNQSDLLGLGVSAISALGNSYS 346

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K    +   +   G A+ +   LS +    + ++  +     +      +   
Sbjct: 347 QNH----KDLAGYYYSIEHQGSALEKGLTLSKDDLIRQRVISDIMCNSMLDKTTISLAFE 402

Query: 352 RNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVI 390
            + D      LQ+       G +  + ++ +    +   +L S+ 
Sbjct: 403 IDFDQYFADELQQLTPFVEDGLVTNLPYAVIVA-PKAQLLLRSIC 446


>gi|121593507|ref|YP_985403.1| coproporphyrinogen III oxidase [Acidovorax sp. JS42]
 gi|222110222|ref|YP_002552486.1| coproporphyrinogen iii oxidase [Acidovorax ebreus TPSY]
 gi|120605587|gb|ABM41327.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax sp.
           JS42]
 gi|221729666|gb|ACM32486.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           ebreus TPSY]
          Length = 460

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 159/410 (38%), Gaps = 28/410 (6%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  +    L +YVH PFC   C YC  N  + R+    E +++    E+
Sbjct: 36  EYILALQQRRVGSVAKAMPLSLYVHIPFCESLCYYCACNKIITRHPERAEVYLRYLSREI 95

Query: 60  QWMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                  G  + +S + FGGGTP+ +    +  ++  + +++ +    E +IE +P +V+
Sbjct: 96  DLHTAHCGVGQHVSQLHFGGGTPTFLTDDGLRELMGMLRRSFVLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                   + G NR+S GVQ  + +  + + R   A +  A +  AR   F  ++ DLIY
Sbjct: 156 EARLGLLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEKVFALVDAARKLGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   ++  L++      D ++LY         F    +     LP  +  V +  
Sbjct: 216 GLPRQTPESFDRTLEQVAELRPDRIALYAYAHLPE-RFKSQRRIITAELPMASAKVSMLA 274

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
            +  +    G     + + +           +   + N+  Y      D IG+G  A  R
Sbjct: 275 RSLDVFQEAGYVYVGMDHFALPDDALAVAKRQGRLHRNFQGYSTQPDCDLIGLGVSAIGR 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K  + +   + +    VV    L+ +      ++M L  +  +  + 
Sbjct: 335 VGATYSQNV----KTLDEYYDCINQGHLPVVRGLALTKDDLVRRAVIMALMCQGELLFEP 390

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
            E     +     +  LQ+      QG ++      +  T  G   +  V
Sbjct: 391 LEQSWLIDFRSYFDAELQQLQEMAAQGLVKISDEG-VEVTPMGWYFVRGV 439


>gi|255310854|ref|ZP_05353424.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276]
 gi|255317154|ref|ZP_05358400.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276s]
 gi|296435569|gb|ADH17743.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9768]
 gi|296436493|gb|ADH18663.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11222]
 gi|296437429|gb|ADH19590.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11074]
 gi|297139928|gb|ADH96686.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9301]
          Length = 378

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++   ++    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAEMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       L  E   +    G +    
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ----ELVDEILMHP-SIGSLFTKD 348

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
                  ++G    DS+   +  
Sbjct: 349 DKAFSLNKKGRLFHDSIAEEIMA 371


>gi|90569657|gb|ABD94727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas aeruginosa]
          Length = 474

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 88/421 (20%), Positives = 156/421 (37%), Gaps = 35/421 (8%)

Query: 2   KYLSAYENNMTGQ-------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
            Y +A + +  G         +  L VY+H PFC   C YC  N  + +       ++  
Sbjct: 44  DYRAAAQRSNLGSSSGSDQGPAKPLSVYIHIPFCKSLCYYCACNKIITQKTHRAVEYLDY 103

Query: 55  FLTEMQWMRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIE 111
              E+     L  G R ++ +  GGGTP+ +  Q +  ++D + +++ +    N E +IE
Sbjct: 104 LKREIAMQAALFDGSRKLTQLHLGGGTPTYLTSQQLGEVMDSLRQHFNLDESDNHEFSIE 163

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
            +P ++        R  G NR+S GVQ  +EQ  + + R  +  +    +  AR   F  
Sbjct: 164 VDPRTISAERIAELRAQGFNRLSFGVQDFDEQVQQSVNRVQSEQQVFELVAAARQAKFKS 223

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           +S DLIY LP QT+  ++  L + ++   D ++ Y                    +P   
Sbjct: 224 VSVDLIYGLPLQTVASFDTTLSKIIALRPDRIAAYSYAHLPE-RVRAQRLIRREDMPPPE 282

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGI 278
             ++L  LT    +  G     + + +    E   +  N     N+  Y      D I +
Sbjct: 283 RKLELLELTIQRLTEAGYVYIGMDHFALPDDELTLARSNGTLQRNFQGYSTHADCDLIAL 342

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           G  + S+V     +      K    +   + +    V +   LS +      ++  L   
Sbjct: 343 GVSSISKVGDTYGQNV----KELSQYYARLDEGLLPVHKGYRLSDDDHLRREVINALMCH 398

Query: 339 EGISVKDWEMLAGRNLDIEC---ERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIAN 392
             +     E   G           + LQ Q   G IE    + L    +G  M+ SV   
Sbjct: 399 GRVDYAPLEECHGIRFAEYFAGPLKQLQEQAGDGLIELHDDA-LVLLPQGQLMMRSVAMA 457

Query: 393 L 393
            
Sbjct: 458 F 458


>gi|109491680|ref|XP_001081294.1| PREDICTED: radical S-adenosyl methionine domain containing 1-like
           [Rattus norvegicus]
 gi|149053892|gb|EDM05709.1| rCG34912 [Rattus norvegicus]
          Length = 442

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 212/380 (55%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R  V +       +TE + + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPRG-VDEGAVRNCLVTEARTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A IL+ +A+   + ++ E+T+EANP+S        +  AGVNR+S+G+QS
Sbjct: 100 TPSLASPHTVAAILEAVAQEVYLPADSEVTLEANPTSAPGPRLAAFGAAGVNRLSIGLQS 159

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  L+ LGR H+A EA+  +  AR++FP R+S DL+  LP Q +  W  +LQ+ L + 
Sbjct: 160 LDDAELQLLGRTHSAREALQTLTEARHLFPGRVSVDLMLGLPAQKVKPWLQQLQKLLRHC 219

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DHLSLYQLT+E+GT  +   + G L  P  ++A ++Y   +++    G   YE+SN + 
Sbjct: 220 DDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEMYQEGRTVLRDAGFRQYEVSNFAR 279

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+GIGPGAH +      G H     I+   P++W+K V   GH 
Sbjct: 280 NGALSNHNWTYWQCGQYLGIGPGAHGQFVPQGAGGHTREARIQTLEPDNWMKEVMLFGHG 339

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             +   LS  +  +E L MGLR   G++ + W             G + +++        
Sbjct: 340 TRKCVPLSELELLEEVLAMGLRTDVGVTHQHWRQFEPQLTLWDVFGASREVKELLEQGL- 398

Query: 366 GFIERVQFSRLRCTQRGMTM 385
                +    LRC+  G+ +
Sbjct: 399 ---LLLDHRGLRCSWEGLAV 415


>gi|75910590|ref|YP_324886.1| coproporphyrinogen III oxidase [Anabaena variabilis ATCC 29413]
 gi|75704315|gb|ABA23991.1| coproporphyrinogen III oxidase, anaerobic [Anabaena variabilis ATCC
           29413]
          Length = 472

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 158/407 (38%), Gaps = 32/407 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP- 68
            +       + +Y H PFC   C +C  N+ + + K   E ++      ++ +  LT   
Sbjct: 55  AIGNDKKTPISLYCHIPFCESACYFCGCNTVITQKKSIVEPYLNYLNRNIRQVANLTNNQ 114

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R++  + +GGGTP+ +    +  +   +   +    N EI+IE NP  +        R  
Sbjct: 115 RTVQQLHWGGGTPNYLSLPQVESLWQTLNDCFRFDENAEISIEVNPRFLTREYLFFLRDL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    Q  + + R          +   R+  F  ++ DLIY LP QT+  +
Sbjct: 175 GFNRISFGIQDFNFQVQQAVNRIQPEEMLFQVMDWMRDAGFASVNVDLIYGLPYQTLETF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  + + +    D ++++        L    H      LPS    +D+  +T    ++HG
Sbjct: 235 KSTVDKTIQLNPDRIAVFNFAYVP-WLKPVQHLIPPAALPSSPEKLDILQMTIEKLTSHG 293

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E         LH  N+  Y      D +G G  + S +    H V 
Sbjct: 294 YVFIGMDHFAKPNDELAIAQQNGKLHR-NFQGYTTKPESDLLGFGMSSISML----HDVY 348

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +   K  +++ + +      + +   L+ +      ++M L  +  +S ++ +     + 
Sbjct: 349 VQNHKRLKNYYQGIDSETLPIEKGVKLNQDDIIRRTIIMELMCQFQLSPENIQEKYDLSF 408

Query: 355 DIEC----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           D +            + L   G I R+    +  T  G  ++ ++ A
Sbjct: 409 DSDFSEYFFPEKLPLQLLAADGLI-RLFPDHIEVTPAGRLLIRNIAA 454


>gi|113972238|ref|YP_736031.1| coproporphyrinogen III oxidase [Shewanella sp. MR-4]
 gi|113886922|gb|ABI40974.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella sp.
           MR-4]
          Length = 446

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 82/401 (20%), Positives = 166/401 (41%), Gaps = 25/401 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
             +    S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+     L   
Sbjct: 32  TAIESSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRAPLFKH 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            +++ + +GGGTP+ + P+ I  + D I  N+  ++  E +IE +P  +E++     ++A
Sbjct: 92  YTVTQMHWGGGTPTFLNPEQILKLTDLIKANFNFAAEGEFSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 152 GFNRISIGVQDFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQTPETF 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L  + D LS++         F    K  D  LPS    +++ + T    +  G
Sbjct: 212 AATMQRVLDLSPDRLSVFNYAHLPA-RFAAQRKIKDEHLPSPKQKLEMLHQTIETLTGAG 270

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 271 YQYIGMDHFAKPDDELAKLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 328

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +K    + + + K+GHA+ +   L+ + +    ++  L     + +   +   G   +
Sbjct: 329 --QKDIRPYYEAIDKDGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKMDEKLGIKFE 386

Query: 356 IECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L           ++     ++  +  G  ++ ++ 
Sbjct: 387 EYFAEDLKLLQTFIDDKLVDVTD-RKITISPTGRLLIRNIC 426


>gi|308051447|ref|YP_003915013.1| oxygen-independent coproporphyrinogen III oxidase [Ferrimonas
           balearica DSM 9799]
 gi|307633637|gb|ADN77939.1| oxygen-independent coproporphyrinogen III oxidase [Ferrimonas
           balearica DSM 9799]
          Length = 456

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 81/406 (19%), Positives = 163/406 (40%), Gaps = 27/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +     + G     L +Y+H PFC K C YC  N  + R+    + ++     E++    
Sbjct: 38  ADLRQAIIGSDKRDLSLYIHVPFCHKLCYYCGCNKIITRHPHKADQYLDYLEREIKNRAP 97

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L    +++ + +GGGTP+ +  + I  +   + +++  ++  E +IE +P  +E+     
Sbjct: 98  LFADYTVTQMHWGGGTPTFLNHEQIRRLTGLLKQHFNFANEGEFSIEIDPREIELETVDV 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            ++ G NRIS+GVQ   +   + + R  +       +  AR   F   + DLIY LP QT
Sbjct: 158 LKEVGFNRISVGVQDFNKDVQKAVNREQDEQFIFDLVKYAREQGFQSTNVDLIYGLPHQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              ++  L+R  + + D LS++         F    K  +  LPS    + +   + +  
Sbjct: 218 PENFQETLERIKALSPDRLSIFNYAHLPH-RFAAQRKIHEEDLPSPQQKLKILENSINTL 276

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
           +  G     + + +    E         LH  N+  Y      D +G+G  A S +    
Sbjct: 277 TGEGYQFIGMDHFAKPDDELAKLQRAGKLHR-NFQGYTTQPDADLLGLGASAISSIGNAY 335

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +  ++     + +   +   GHA+V+   L  +      ++  L     +     E   
Sbjct: 336 AQNQVA----LKDYYDAIDAEGHALVKGCSLERDDFIRRAVIKQLICHFELDTTTIERDW 391

Query: 351 GRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             N +     +L           +E V+ + +R T +G  ++ ++ 
Sbjct: 392 DINFNEYFAEDLKLLTPFIEDQLVE-VEGNIIRVTAQGNLLIRNIC 436


>gi|15604771|ref|NP_219555.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|3328444|gb|AAC67643.1| Coproporphyrinogen III Oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748182|gb|ADI50728.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-EC]
 gi|297749062|gb|ADI51740.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-LC]
          Length = 378

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 180/383 (46%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++   ++    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAEMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       +D          G +    
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ---ELIDEILMHPSI--GSLFTKD 348

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
                  ++G    DS+   +  
Sbjct: 349 DKAFSLNKKGRLFHDSIAEEIMA 371


>gi|167563788|ref|ZP_02356704.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis EO147]
          Length = 464

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 88/410 (21%), Positives = 156/410 (38%), Gaps = 30/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R++S + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVSQLHWGGGTPTFLSDAETTELMAATREYFTLASDRAGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ+ +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQNFDRDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +  D  LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHMPH-LFRMQRQIDDAALPPPATWIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     + A    K    +   + +    +V    LS++ +    ++  L     +    
Sbjct: 340 IGDVYAQNA----KDLPRYGAALAEQRLPIVRGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +E   G     +  R L      +R G +  +   RL     G   + ++
Sbjct: 396 FEAAYGIRFANKFARELDTLRGFERDGLLS-IGGDRLTIHPAGRLYVRNI 444


>gi|121600015|ref|YP_993700.1| coproporphyrinogen III oxidase [Burkholderia mallei SAVP1]
 gi|167001125|ref|ZP_02266926.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
 gi|121228825|gb|ABM51343.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei SAVP1]
 gi|243063072|gb|EES45258.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
          Length = 483

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 151/409 (36%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  + +++  + + E+ +E +P +V   
Sbjct: 122 VAPDLGRDRRTTQLHLGGGSPTFFAIDELARLMRALREHFDFAPHAELGVEIDPRTVNER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALEASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + + +++Y       + F       +  LP     + ++  +
Sbjct: 242 PRQTPESFSRTLDEVIRLSPERIAVYNYAHLP-SRFKAQRLIVEAQLPPAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELGNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     L+++       +M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALTADDLLRREAIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GHRHGIDFARYFAPELAQLEPYRDAGLLT-IDAQRIAVTPKGRMFVRAI 463


>gi|166154273|ref|YP_001654391.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 434/Bu]
 gi|166155148|ref|YP_001653403.1| coproporphyrinogen III oxidase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335523|ref|ZP_07223767.1| coproporphyrinogen III oxidase [Chlamydia trachomatis L2tet1]
 gi|165930261|emb|CAP03747.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis 434/Bu]
 gi|165931136|emb|CAP06701.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 376

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 182/383 (47%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L+
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLR 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++   ++    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAEMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       L  E   +    G +    
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ----ELVDEILMHP-SIGSLFTKD 348

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
                  ++G    DS+   +  
Sbjct: 349 DKAFSLNKKGRLFHDSIAEEIMA 371


>gi|257066661|ref|YP_003152917.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
 gi|256798541|gb|ACV29196.1| oxygen-independent coproporphyrinogen III oxidase [Anaerococcus
           prevotii DSM 20548]
          Length = 369

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 110/366 (30%), Positives = 191/366 (52%), Gaps = 13/366 (3%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           F  KKC YCDF +++   +   E +I++ + E++  ++      I +I  GGGTPS ++ 
Sbjct: 7   FLSKKCYYCDFCAYM-NVENRVEPYIKNLIKEIKLYQERLNI-EIDTIHIGGGTPSYVDA 64

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  I++ I K        E TIE NP+S+       Y+  G+NRISLGVQS +++ L+
Sbjct: 65  KYIEEIVNEIKKFKI-EKIKEFTIECNPNSISKEKLAIYKDIGINRISLGVQSFDDEVLK 123

Query: 147 FLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +GRNH A  A+  I + R+  F  +SFDL+  LP+QT    + EL      + +H+S Y
Sbjct: 124 EIGRNHTADIALKDIDMIRDAGFDNLSFDLMLNLPRQTYKSVKNELAMVKKISPEHISWY 183

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +E+G+ FY + K G L L  +++ V +++         GL  YEISN +    ES+H
Sbjct: 184 SLILEEGSRFYALDKKGKLGLMEDDLEVVIFSYLVDSLDKLGLKRYEISNFAKASKESIH 243

Query: 266 NLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ 325
           N  YW   DYI  G GA   +    +    +  K    + K +R+  + +V +EF+  ++
Sbjct: 244 NKKYWNIDDYIAFGLGASGFLSNKRYTNTRNFVK----YDKAIREARYPIVFEEFIDKDE 299

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRG 382
           +  E+++  LR  EGI++++++     +  +   +     + Q F +         T++G
Sbjct: 300 REKEYIIFKLRESEGINLREFKEKFACDFLVKYQDVIEKFKDQDFYKLDDN--FYFTKKG 357

Query: 383 MTMLDS 388
           M++ + 
Sbjct: 358 MSLSNE 363


>gi|87125529|ref|ZP_01081374.1| Oxygen-independent coproporphyrinogen III oxidase:Putative oxidase
           [Synechococcus sp. RS9917]
 gi|86166829|gb|EAQ68091.1| Oxygen-independent coproporphyrinogen III oxidase:Putative oxidase
           [Synechococcus sp. RS9917]
          Length = 429

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 121/405 (29%), Positives = 182/405 (44%), Gaps = 34/405 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQL-TGPR 69
           S     YVH PFC ++C YCDF       +           IQ++L  +     L     
Sbjct: 2   SAPRSAYVHIPFCHRRCFYCDFAVVPLGDRADAAAGPGRASIQAYLALLHEEIGLSPAGP 61

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +++++ GGGTPSL+ P  IA +L  + + + +    EIT+E +P+S ++ + +    AG
Sbjct: 62  PLATVYVGGGTPSLLTPSQIADLLQRLTQRFGLQDGAEITLEMDPASFDLQHLEAVLDAG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQTM 184
           V R+SLG QS ++  L  LGR H  ++  AA    +           S DLI  LP QT 
Sbjct: 122 VTRVSLGGQSFDDGVLASLGRRHRRADLQAACTWLQRALLQGRLTSWSLDLIRNLPGQTE 181

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            QW+ +L+ AL+  V HLS+Y L++E GT+F    + G+LVLP +  AV+    T     
Sbjct: 182 AQWQQQLELALAAGVPHLSVYDLSVEPGTVFAWRQQRGELVLPDDGEAVERIRQTGERLR 241

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
             G   YE+SN++  G  S HN  YW    + G G GA S    G       I +    W
Sbjct: 242 QAGFCRYEVSNYARPGHASRHNRVYWSGAGWWGFGLGATS-APWGRRLARPRIREAYARW 300

Query: 305 LKMVRKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           L   R+       A         +        +GLR REG+ +      +G +    CER
Sbjct: 301 LMTQRQQPDCSLLASAAVPLPLDDLLL-----VGLRRREGVDLWRLAAASGWD-AATCER 354

Query: 361 NL----------QRQGFIERVQFSRLRC-TQRGMTMLDSVIANLA 394
           +L          + QG IE     R R     G+ + + V+  + 
Sbjct: 355 HLPDLERRWLEPEAQGLIESC-GRRWRLRDPEGLALSNQVLVEVV 398


>gi|283769567|ref|ZP_06342463.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bulleidia extructa W1219]
 gi|283103835|gb|EFC05221.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bulleidia extructa W1219]
          Length = 363

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 188/379 (49%), Gaps = 24/379 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C YCDF +HV         ++++   E++       P ++ +I+ GGG
Sbjct: 5   ALYLHVPFCAHICAYCDF-AHVGYCSSLVNQWLEALKIEIE---DKKVPENLETIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP  ++   +  +L  +          E TIE NP  + +   +   + G+NR S+G QS
Sbjct: 61  TPVSLQEDELEKLLILLDPYC--QKIKEYTIEINPEVMTLEKAKICHRHGINRASIGFQS 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ + R H+ +E    I   + +     S DL+Y+LP QTM  ++  +  AL+  
Sbjct: 119 SDKRLLKLMDRQHDYTEVQEMIEFLKKVGITNYSLDLLYSLPGQTMELFQQSVNDALALE 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLSLY LTIE  TLF +      L     ++  D+Y    +   + G   YEISN + 
Sbjct: 179 PKHLSLYSLTIEPNTLFARK----GLKPLEADLEADMYEWICAYLPSQGYDHYEISNFAK 234

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ES HN  YW Y D+IG+  GA  +     +  + ++ ++ ++ L+          +K
Sbjct: 235 KGFESRHNQMYWHYEDFIGLSCGASGKENHERYDKSKNLREYLKNPLEY---------KK 285

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQFSR 375
             L  E +  E +MMGLRL+EGI + DW+     N+    ++  Q+    G +  ++ + 
Sbjct: 286 IPLGKEDEQFESIMMGLRLKEGIDLLDWKEKYQENMVEYYDKAFQKHLSNGNLV-LEGTY 344

Query: 376 LRCTQRGMTMLDSVIANLA 394
           +RCT++G  +L S++ +  
Sbjct: 345 VRCTKKGFPILQSILVDFL 363


>gi|29840180|ref|NP_829286.1| coproporphyrinogen III oxidase [Chlamydophila caviae GPIC]
 gi|29834528|gb|AAP05164.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Chlamydophila caviae GPIC]
          Length = 375

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 107/385 (27%), Positives = 187/385 (48%), Gaps = 23/385 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISS 73
           G   L +Y+H+PFC KKC YC F +     +     +  +     +  +  +     I +
Sbjct: 3   GKQPLALYIHFPFCSKKCHYCSFYTIPYNPES-VSLYCNAVLQEGLNKLAAIKDTHFIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSLI P ++  I+  +A +       EIT+EANP  +  +  +      +NRI
Sbjct: 62  VFFGGGTPSLIPPHHLHNIITLLAPHAQ-----EITLEANPEDLSESYLRDLTLTPINRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H+AS ++ A+H      F  +S DLIY LP Q++  +  +L 
Sbjct: 117 SIGVQTFHDPILKALGRIHSASTSMDAVHRCYEHEFHNISIDLIYGLPTQSLADFLADLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LT++  T FYK  +     + ++++   +    + + S+ G   YE
Sbjct: 177 QALTLPIAHISLYNLTLDPHTSFYKHRRILTPSIANDDILAAMSLSAEELLSSRGFSRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A+S HNL YW    ++G+G  A   +     +    I      +L+ VRKN 
Sbjct: 237 LASYAKSQAQSKHNLYYWTDKPFLGLGVSASQYIDKVRSKNLSRIS----QYLRAVRKNL 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV- 371
                 E L  +++  E L + LRL +G  +KD+             ++L     I+ + 
Sbjct: 293 PTHESTECLPEKERIKEALALRLRLTKGAKIKDF--------PPSLIQSLTSLPLIKELF 344

Query: 372 --QFSRLRCTQRGMTMLDSVIANLA 394
                 L   ++G    D++   + 
Sbjct: 345 DHNDEFLFLNKQGRLFHDTIAEEIM 369


>gi|206561440|ref|YP_002232205.1| coproporphyrinogen III oxidase [Burkholderia cenocepacia J2315]
 gi|198037482|emb|CAR53418.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           cenocepacia J2315]
          Length = 463

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 84/406 (20%), Positives = 153/406 (37%), Gaps = 32/406 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
            G  S+ L +Y H PFC   C YC  N      +     ++     EM     L  P R 
Sbjct: 50  PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREMALQAALFDPSRP 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKA 128
           ++ + +GGGTP+ +     A ++    ++++++   + E +IE +P +V        R  
Sbjct: 110 VTQLHWGGGTPTFLSDDETAELMAATREHFSLAPDTDAEFSIEIDPRTVTPATLVHLRTI 169

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY LP QT+  +
Sbjct: 170 GFNRLSLGVQDFDPVVQQAINRIQPLAMTADLLGAARATGFHSVSVDLIYGLPHQTVAVF 229

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  +  A D LS++        LF    +  D  LP     + L  L   + ++ G
Sbjct: 230 ARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPPPETRIALLGLAIDMLTSAG 288

Query: 248 LHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +    E   +  N     N+  Y      D IG G  +  +V     + A 
Sbjct: 289 YVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLIGFGVSSIGKVGDVYAQNA- 347

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL- 354
              K   ++   +      +     L+ + +    ++  L     +     E   G    
Sbjct: 348 ---KDLPAYGAALDAGRLPIARGVRLTPDDRLRRDVITQLMCNLELPFSHVEAAHGIRFA 404

Query: 355 -----DIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
                +++  R  +R G +   +    R T    G  ++ ++    
Sbjct: 405 DHFARELDALRPFERDGLLTIARD---RLTIHPAGRMVVRNIAMAF 447


>gi|120610216|ref|YP_969894.1| coproporphyrinogen III oxidase [Acidovorax citrulli AAC00-1]
 gi|120588680|gb|ABM32120.1| oxygen-independent coproporphyrinogen III oxidase [Acidovorax
           citrulli AAC00-1]
          Length = 460

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 80/410 (19%), Positives = 160/410 (39%), Gaps = 28/410 (6%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  +    L +YVH PFC   C YC  N  + R+    + +++    E+
Sbjct: 36  EYVLALQQRRLGSAAKAVPLSLYVHIPFCESLCYYCACNKIITRHPERADVYLRYLSREI 95

Query: 60  QW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              M       ++S +  GGG+P+ +  + +  +++ + +++T+    E +IE +P +V+
Sbjct: 96  DLHMAHCALGHAVSQLHIGGGSPTFLGDEALQELMNMLRRSFTLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                   + G NR+S GVQ  +    + + R   A +  A +  AR I F  ++ DLIY
Sbjct: 156 AGRLARLAELGFNRLSFGVQDFDPAVQKAVHRVQPAEQVFALVQEARRIGFESINVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   ++  L +      D ++LY         F    +     LP  +  V + +
Sbjct: 216 GLPRQTPESFDRTLAQVCELRPDRIALYAYAHLPE-RFKPQRRIVSAELPMASAKVSMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
            + +     G     + + +           +   + N+  Y      D I +G  A  R
Sbjct: 275 RSLNAFQDAGYVYVGMDHFALPEDALAVAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGR 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K  + +  ++ +    VV    L+ +      ++M L  +  +  + 
Sbjct: 335 VGATYSQNA----KTLDEYYDLINQGRLPVVRGLALTRDDLVRRSVIMALMCQGEVLFEP 390

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
            E     +        L+        G +   +   +  T+ G   +  V
Sbjct: 391 MEQSWLIDFRRYFAAELEALEGMAGDGLVNVGEDG-ITVTEMGWFFVRGV 439


>gi|76788765|ref|YP_327851.1| coproporphyrinogen III oxidase [Chlamydia trachomatis A/HAR-13]
 gi|237802487|ref|YP_002887681.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804402|ref|YP_002888556.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76167295|gb|AAX50303.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis A/HAR-13]
 gi|231272702|emb|CAX09605.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231273721|emb|CAX10499.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis B/Jali20/OT]
          Length = 378

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALVLTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++   ++    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAEMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       L  E   +    G +    
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ----ELVDEILMHP-SIGSLFTKD 348

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
                  ++G    DS+   +  
Sbjct: 349 DKAFSLNKKGRLFHDSIAEEIMA 371


>gi|255348415|ref|ZP_05380422.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70]
 gi|255502956|ref|ZP_05381346.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70s]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 180/383 (46%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++    +    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAQMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       L  E   +        +  
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ----ELVDEILMHPSISSLFTKDD 349

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +     ++G    DS+   +  
Sbjct: 350 KA-FSLNKKGRLFHDSIAEEIMA 371


>gi|262195766|ref|YP_003266975.1| oxygen-independent coproporphyrinogen III oxidase [Haliangium
           ochraceum DSM 14365]
 gi|262079113|gb|ACY15082.1| oxygen-independent coproporphyrinogen III oxidase [Haliangium
           ochraceum DSM 14365]
          Length = 385

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 20/387 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +GVYVH P+C   CPYCDF  S V R  +    ++ +   E+       G R + SI+ G
Sbjct: 1   MGVYVHVPWCRTLCPYCDFAVSVVGRSGIPHRAYLDALCAELSERAPALGDRELVSIYLG 60

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNV-----EITIEANPSSVEVNNFQGYRKAGVNR 132
           GGTPSL EP  +A ++D +       S +     EIT+EANP          +R+ GVNR
Sbjct: 61  GGTPSLWEPACVAALIDAVTAALGARSALARGALEITLEANPQDCAPERLAAWRQGGVNR 120

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK----QTMTQWE 188
           +S+GVQSL  Q+L  LGR+H      A        F R+S D I+ +P     +  +  +
Sbjct: 121 LSIGVQSLRPQALAVLGRSHLGDGMAALAAARAAGFTRVSADAIFGVPGAAADRDDSALD 180

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++   +  V HLS+Y+LTIE  T + K  + G +   +E+V    Y       +A G 
Sbjct: 181 RSIEALAATGVGHLSVYELTIETRTAYGKAVRAGRMQPLAEDVLAAQYEAVHRALAARGY 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKM 307
             YEIS+++  G  ++HN  YW   +Y+G+G GA S  ++ G      +  +   ++L+ 
Sbjct: 241 QHYEISSYARPGHRAVHNSLYWSGAEYLGLGCGAASFLLREGGGGERATNLRSVHAYLRA 300

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
             +    V  +E LS +  A + + +G+R  +GI               E    L  +  
Sbjct: 301 --RGDQRVAAREQLSPQDVALDRVWLGMRTIDGIPAAALAR------APELVDWLLSERL 352

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANLA 394
           + R +  RL  T RG +  D + + + 
Sbjct: 353 VTR-EGERLCPTLRGFSYADRIASRMF 378


>gi|149908542|ref|ZP_01897204.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
 gi|149808376|gb|EDM68313.1| coproporphyrinogen III oxidase [Moritella sp. PE36]
          Length = 459

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 78/395 (19%), Positives = 162/395 (41%), Gaps = 25/395 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               L +YVH PFC K C YC  N  + R++   + ++     E++        R++S +
Sbjct: 51  PDKPLSLYVHIPFCHKLCYYCGCNKVITRHRHKADQYLDVLEAEIKQQAPFFKNRNVSQL 110

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +    I  ++D +  ++    + EI+IE +P  +E++      + G NR+S
Sbjct: 111 HWGGGTPTFLTQPQIQRLIDVLRDSFNFDDDAEISIEVDPREIELSTIDLLAEVGFNRLS 170

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +++    + R  +     A I  A    F   + DLIY LP QT   +   L+R
Sbjct: 171 LGVQDFDKKVQIAVNREQDEEFIFAIIKRAHELGFKSTNIDLIYGLPHQTKATFHKTLER 230

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L      L+++       +LF    K  +  +PS +  + +   + +  + +G     +
Sbjct: 231 VLDLDPARLTVFNYAHLP-SLFAGQRKMKEEDMPSASDRLAILEDSIAFLTDNGYQFIGM 289

Query: 254 SNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +    E        + + N+  Y      D +G+G  + S++     +     +K  
Sbjct: 290 DHFAKPDDELAVAQRNGILHRNFQGYTTQGESDLLGLGVSSISQIGNAYSQN----QKEL 345

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------D 355
           + + K V + GHA      L+ +      ++  L     + +         +       D
Sbjct: 346 KKYYKQVDELGHAQWRGVGLNEDDSIRRAVIKQLMCNFELDMDKIAETFNLDFATYFAED 405

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +   +       +  ++ + L+   +G  ++ ++ 
Sbjct: 406 MALLQTFINDELV-IIEGNMLQVAPKGKLLIRNIC 439


>gi|158333665|ref|YP_001514837.1| coproporphyrinogen III oxidase [Acaryochloris marina MBIC11017]
 gi|158303906|gb|ABW25523.1| oxygen-independent coproporphyrinogen III oxidase [Acaryochloris
           marina MBIC11017]
          Length = 464

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 81/399 (20%), Positives = 161/399 (40%), Gaps = 32/399 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFF 76
            L +Y H PFC   C +C  N+ + + K   + ++Q  +  ++ + +  G  R++  + +
Sbjct: 55  PLSLYCHIPFCETPCFFCGCNTVITQRKQVADPYLQYLIRNIRQVAEQVGSDRNVHQLHW 114

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +    I L+ + +   ++     EI+IE NP  ++ N     R+ G NRIS G
Sbjct: 115 GGGTPNYLSWPQIELLWNALQDAFSFDPAAEISIEVNPCYIDRNTVFFLRELGFNRISFG 174

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  + Q    + R  +       I   +   F  ++ DLIY LP QT+T +   +Q+ +
Sbjct: 175 IQDFDPQVQIAVNRIQSEELLFNVISWIQEADFDSVNVDLIYGLPHQTVTTFANTVQKTI 234

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D ++++        +  +        LP +   +++   T      +G     + +
Sbjct: 235 QLNPDRIAVFNFAYMPQLIPVQRQLPAHA-LPHKAEKLEMLQQTIDQLEGNGYRFIGMDH 293

Query: 256 HSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +    E         LH  N+  Y      D +G G  A S ++     V     K  +
Sbjct: 294 FAKPKDELALAQTAGQLHR-NFQGYTTKPESDLLGFGLSAISMLQD----VYTQNHKRLK 348

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE--- 359
            +   +      + +   LS + Q    ++M L  +  +S    E       D + E   
Sbjct: 349 DYYHALDTTPFPIAKGVGLSEDDQVRRAVIMELMCQFQLSQVALEEKYQLKFDPDFEQYF 408

Query: 360 -------RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                  + L   G +E +  ++++ T  G  ++ ++ A
Sbjct: 409 ASEKTALQALAADGLVE-LSPNQIQVTPTGRLLIRNIAA 446


>gi|323438547|gb|EGA96294.1| coproporphyrinogen III oxidase [Staphylococcus aureus O11]
 gi|323441272|gb|EGA98942.1| coproporphyrinogen III oxidase [Staphylococcus aureus O46]
          Length = 321

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 102/326 (31%), Positives = 163/326 (50%), Gaps = 11/326 (3%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    +  +L  I   +T++   E T EANP  +     Q   K GVNRI
Sbjct: 1   MYVGGGTPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVNRI 58

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L 
Sbjct: 59  SMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLD 118

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YE
Sbjct: 119 LALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYE 178

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G ES HN  YW   +Y G G GA   V    +     +      ++K + K  
Sbjct: 179 ISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKES 234

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIE 369
            A++     S  ++ +E + +GLRL EG+S + ++    ++++    +   NL+ +  I 
Sbjct: 235 KAILVSNKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTINNLKEKKLIV 294

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +   +  T RG  + + V     +
Sbjct: 295 E-KNDAIALTNRGKVIGNEVFEAFLI 319


>gi|255506625|ref|ZP_05382264.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D(s)2923]
 gi|289525097|emb|CBJ14568.1| oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis Sweden2]
 gi|296434638|gb|ADH16816.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/150]
          Length = 376

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVSPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++   ++    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAEMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       L  E   +        +  
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ----ELVDEILMHPSISSLFTKDD 349

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +     ++G    DS+   +  
Sbjct: 350 KA-FSLNKKGRLFHDSIAEEIMA 371


>gi|221213749|ref|ZP_03586723.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD1]
 gi|221166538|gb|EED99010.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD1]
          Length = 463

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 87/418 (20%), Positives = 154/418 (36%), Gaps = 38/418 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N            ++     E+  
Sbjct: 42  DYVRAASD--PGASSSELSLYFHIPFCNTACFYCGCNRIATNNHRRARPYLDQLKREIAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L    R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QATLFDRSRPVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R    +     +  AR   F  +S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPDVQRAINRIQPLAMTADVMAAARATGFHSISVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAAFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRRIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLIGIGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALEAGRLPIARGVRLTADDRLRRDVIAQLMCNLELPFSP 394

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
                   +     R LD    R  +R G +        R T    G  ++ ++    
Sbjct: 395 IEAAHGIRFADRFARELD--ALRPFERDGLLTTAAD---RLTIHPPGRMVVRNIAMAF 447


>gi|170078594|ref|YP_001735232.1| coproporphyrinogen III oxidase [Synechococcus sp. PCC 7002]
 gi|169886263|gb|ACA99976.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. PCC 7002]
          Length = 465

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 156/407 (38%), Gaps = 32/407 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GP 68
            M       L +Y H PFC K C +C  N+ + +YK     ++   +  +Q +  L  G 
Sbjct: 48  AMGNYKKTPLSLYCHIPFCEKPCYFCGCNTIITQYKPAAATYLDYLIRHIQQVAPLVQGD 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + +GGGTP+ +  + +  +   +  N+  + + EI+IE NP  V         + 
Sbjct: 108 RLVQQLHWGGGTPNYLNLEQVTRLWQTLQDNFQFAPDAEISIEINPCEVSREYIFVLHQL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  RIS G+Q    Q    + R     +    +   R   F  ++ DLIY LP QT+  +
Sbjct: 168 GFKRISFGIQDFNPQVQAAVNRIQPEEKLFEVMAWIREAGFESVNVDLIYGLPYQTLATF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +++ +    D ++++           +     +  +P     +++  +T +  + HG
Sbjct: 228 TETVEKTIQLNPDRIAVFSFAYVPWLKPLQKR-MPEAAMPPTAEKLEILKMTIANLTYHG 286

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E         LH  N+  Y      D +G G  + S ++     V 
Sbjct: 287 YVFIGMDHFAKPNDELAIAQQAGELHR-NFQGYTTKPESDLLGFGMTSISMLQN----VY 341

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               K  + +   + +    + +   LS +      ++M L  +  +S  + E       
Sbjct: 342 AQNHKKLKDFYAAIDQQVLPIEKGVQLSQDDLIRRTVIMELMCQFQLSAPNLENKYHLGF 401

Query: 355 DIE----------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           D++             +L+  G I R      + T  G  ++ ++ A
Sbjct: 402 DLDFNDYFQAELSALNDLEADGLIHRSGDG-FQVTPSGRLLIRNIAA 447


>gi|134294957|ref|YP_001118692.1| coproporphyrinogen III oxidase [Burkholderia vietnamiensis G4]
 gi|134138114|gb|ABO53857.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           vietnamiensis G4]
          Length = 463

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/412 (21%), Positives = 156/412 (37%), Gaps = 32/412 (7%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A      G  S+ L +Y H PFC   C YC  N            +++    E+     L
Sbjct: 44  ARAARDPGASSSELSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELALQAAL 103

Query: 66  TGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNF 122
             P R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V     
Sbjct: 104 FDPARPVTQLHWGGGTPTFLSDAETAELMAATREHFALAPDMDAEFSIEIDPRTVTPATL 163

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R  G NR+SLGVQ  +    + + R    +     I  AR   F  +S DLIY LP 
Sbjct: 164 VHLRNIGFNRLSLGVQDFDPVVQQAINRVQPRAMTADLISAARTAGFHSVSVDLIYGLPH 223

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+  +   L+  +  A D LS++        LF    +  D  LPS    + L  L   
Sbjct: 224 QTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPSPETRIALLGLAID 282

Query: 242 ITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVG 289
           + ++ G     + + +    E   +  N     N+  Y      D IGIG  +  +V   
Sbjct: 283 MLTSAGYVYIGMDHFAKPTDELVRAQQNGTLQRNFQGYSTRADTDLIGIGVSSIGKVGDV 342

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             + A    K   ++   +      +     L++E +    ++  L     +     E  
Sbjct: 343 YAQNA----KDLPAYGAALDAGRLPIARGVRLTAEDRLRRDVITQLMCNLELPFSHIEAA 398

Query: 350 AGRNL------DIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
            G +       ++E  R  +R G +     S    T    G  ++ ++    
Sbjct: 399 HGVHFAEHFARELEALRPFERDGLLSIAGDS---LTIHPAGRMVVRNIAMAF 447


>gi|330815770|ref|YP_004359475.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia gladioli BSR3]
 gi|327368163|gb|AEA59519.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia gladioli BSR3]
          Length = 463

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 159/410 (38%), Gaps = 30/410 (7%)

Query: 4   LSAYENNMT--GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++ YE      G  S+ L +YVH PFC   C YC  N    R +     ++     E+  
Sbjct: 40  IADYERAAADPGAASSELSLYVHIPFCATACFYCGCNRIATRNRAHARPYLDRLKRELAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
             +   P R I+ + +GGGTP+ +    +A ++     ++ ++++   EI+IE +P +  
Sbjct: 100 QARCFDPDRVITQLHWGGGTPTFLSDAQMAELMAATRAHFPIAADSESEISIEVDPRTAT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIY 177
                  R  G NR+SLGVQ ++ +  R + R        + I  AR +  R +S DLIY
Sbjct: 160 PATLAHLRMQGFNRLSLGVQDVDPEVQRAVNREQPIELTASLISAARLVGYRSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQT+  +   L   +  A D +S++        LF    +     LP     V L  
Sbjct: 220 GLPKQTVETFARTLAAVIELAPDRISVFGYAHLPQ-LFKMQRRIDAAGLPPPAARVALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFL-----GAESLHNL--NYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +        A+    L  N+  Y      D IG+G  +  +
Sbjct: 279 LAIETLTHAGYIYIGMDHFARPSDELVAAQRKGTLQRNFQGYSTRADTDLIGVGMSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   +W   +      +     LS+E +    ++M L     +   +
Sbjct: 339 VGDVYAQNA----KDLAAWGAAIDAGRLPIARGRRLSAEDRLRRDVIMRLMCHATLPFAE 394

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
            E+  G        R L         G +  ++   L     G   + ++
Sbjct: 395 IEVTYGIRFAERFARELAALREFECDGLVA-IEPGCLTIRPAGRPFVRNI 443


>gi|332526268|ref|ZP_08402397.1| coproporphyrinogen III oxidase [Rubrivivax benzoatilyticus JA2]
 gi|332110102|gb|EGJ10730.1| coproporphyrinogen III oxidase [Rubrivivax benzoatilyticus JA2]
          Length = 448

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 160/412 (38%), Gaps = 27/412 (6%)

Query: 2   KYLSAYENNMTGQ---GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE 58
           +Y  A      G    G+  L +Y+H PFC   C YC  N  + ++      ++ +   E
Sbjct: 23  EYRQALRQRAEGSTVGGTPPLSLYIHIPFCESVCYYCACNKIITKHHERSTEYLDALEAE 82

Query: 59  MQW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +   + +L   +++S + FGGG+P+ +  + IA +++ +   + V +  EI+IE +P + 
Sbjct: 83  IAMHVAELGKGQTVSQLHFGGGSPTFLTDEEIARLMNTLRDAFKVVAGAEISIEVDPRTA 142

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLI 176
                +     G NRIS G+Q  + +    + R  +       +  AR N F  ++ DLI
Sbjct: 143 TPERLRSLAAVGFNRISFGIQDFDPEVQEAVHRVQSYDSVRDLVIAARANGFESINADLI 202

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +Q+      D ++LY       T F    +     LP     + + 
Sbjct: 203 YGLPKQTPESFARTIQQIAELRPDRIALYAYAHLP-TRFKPQRRILAEDLPKGEERIKML 261

Query: 237 NLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHS 284
               +   A G     + + +  G        +   + N+  Y      D I +G  +  
Sbjct: 262 GGAIAGFIAAGYTYIGMDHFALPGDALSAARRQGRLHRNFQGYSTQPDCDLIALGVSSIG 321

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           R+     + A    K    + + + K    +V    L+ +    + ++M +  +  +  +
Sbjct: 322 RMGATYSQNA----KTLPEYYESIAKGEFPIVRGLALTRDDLLRQAVIMAIMCQGRVEYE 377

Query: 345 DWEMLAGRNLDIECERNLQ-----RQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             E+             ++      +G +  V    ++ T  G   +  V A
Sbjct: 378 SIELSHMIKFRDYFAAEIEDLKPFAEGGLVEVNDDSIQITALGWYYVRGVAA 429


>gi|224541314|ref|ZP_03681853.1| hypothetical protein CATMIT_00474 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525751|gb|EEF94856.1| hypothetical protein CATMIT_00474 [Catenibacterium mitsuokai DSM
           15897]
          Length = 363

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/380 (27%), Positives = 177/380 (46%), Gaps = 28/380 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C YCDF     R     E F+  +L  ++          + +I+ GGG
Sbjct: 5   ALYIHIPFCDHICSYCDFAKVYYR-----EEFVLQYLERLKEELDTLPHHPMETIYIGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +    + ++L+ I         +E TIE NP S  ++  +     GVNR+S+GVQ+
Sbjct: 60  TPSALSLNQLKMLLNMIDPFVG-DGTLEYTIEVNPESATLDKLEIMHLHGVNRLSVGVQT 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L+ + R H +S A   +  A+ I F  +S DL+Y LP QT+   + +LQ ALS  
Sbjct: 119 FDNTLLKRIERYHTSSIAKEVVRNAKAIGFKHISIDLMYGLPGQTLEDVKEDLQIALSLP 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++HLS Y L +E+ T  Y  ++  D     E       +      S  G H YE+SN++ 
Sbjct: 179 INHLSYYSLILEEHTRLYDNYEPLD-----EETEGIWSDYIVETLSRAGFHRYEVSNYAL 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN  YW Y +Y G+G GA  ++       + S+  + +             +EK
Sbjct: 234 GNHESYHNKVYWHYENYYGVGIGATGKIDDELISHSRSLTDYLQG-------KNTIYIEK 286

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIERVQFS 374
           E +  E      LMM LRL EG+ + +++      ++        +NL     +  ++ +
Sbjct: 287 ETI--EDTMFNHLMMSLRLEEGLDLDEFKRRYHHTIEEVYKEALSKNLDNHNLV--IENN 342

Query: 375 RLRCTQRGMTMLDSVIANLA 394
            L+     + +L+S++ +  
Sbjct: 343 HLKTNHT-LDLLNSILLDFL 361


>gi|254253031|ref|ZP_04946349.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
 gi|124895640|gb|EAY69520.1| Coproporphyrinogen III oxidase [Burkholderia dolosa AUO158]
          Length = 552

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/414 (21%), Positives = 156/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N      +     ++     E+  
Sbjct: 131 DYVRAAGD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNRRRARPYLDQLKREIAL 188

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
                 P R+++ + +GGGTP+ +     A ++    +++T++   + E +IE +P +V 
Sbjct: 189 QAARFDPARAVTQLHWGGGTPTFLSDDETAELMAATREHFTLAPDADAEFSIEIDPRTVT 248

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +      + R          +  AR   F   S DLIY
Sbjct: 249 PATLVHLRTIGFNRLSLGVQDFDPVVQHAINRIQPLEMTADLLSAARATGFHSTSVDLIY 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L+  +  A D LS++        LF    +  D  LPS +  + L  
Sbjct: 309 GLPHQTVSVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDAALPSPDTRIALLG 367

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + +  G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 368 LAIDMLTTAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLIGIGVSSIGK 427

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     LS+E +    ++  L     +    
Sbjct: 428 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLSAEDRLRRDVITQLMCNLELPFSP 483

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +   G        R L      +R G +  +   RL     G  ++ ++    
Sbjct: 484 IDAAHGIRFADHFARELDALRTFERDGLLT-IAGDRLTIHPAGRMVVRNIAMAF 536


>gi|317403266|gb|EFV83784.1| oxygen-independent coproporphyrinogen III oxidase [Achromobacter
           xylosoxidans C54]
          Length = 475

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 150/412 (36%), Gaps = 26/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A         +  L +YVH PFC   C YC  N  + R+      ++ +   E+  
Sbjct: 53  EYRQALRQRREACTNEPLSLYVHIPFCDSVCYYCACNKVITRHHDRAARYLDALAREIAL 112

Query: 62  -MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +L     +S + FGGGTP+ +  + +  ++  +   +    + EI+IE +P +    
Sbjct: 113 HVAELGAGMPVSQLHFGGGTPTFLSDEELDRLMADLRGAFRFEPDAEISIEVDPRTATPQ 172

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             +  R+ G NR+S GVQ  + +    + R  +  +    +  AR + +  ++ DLIY L
Sbjct: 173 RLEKLRRLGFNRLSFGVQDFDARVQVAVHRVQSFEDVRDLMQSARALDYASINVDLIYGL 232

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +   + +  +   D ++LY         F    +   L LP     V L +  
Sbjct: 233 PLQTAESFARTIAQVSALRPDRIALYAYAHLPE-RFKPQRRINPLDLPDRATRVGLLSAA 291

Query: 240 QSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
                  G     + + +               + N+  Y      D + +G  A  R+ 
Sbjct: 292 IEGFLKQGYAYIGMDHFALNTDALAIAKQRGQLHRNFQGYSTQPDRDLVALGVSAIGRIG 351

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               + A    K  + +   +     AV +   L+++      ++M +  +  +     E
Sbjct: 352 DTYSQNA----KDLDEYYAAIESGRFAVEKGLALNADDLVRREVIMDIMCQGRVDFARVE 407

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G               NL   G +  +    LR T  G   + +V    
Sbjct: 408 ARHGLRFGTYFGPELTQMANLAELGLV-NLGAGELRVTGLGWYFVRAVAMAF 458


>gi|296438356|gb|ADH20509.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/11023]
          Length = 376

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 16/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++   ++ ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHIPFCSKKCHYCSFYTIPYKEEL-MRSYCEAVIKEGLKKLAPLRCSHYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +          EIT+EANP ++ +   Q      +NRI
Sbjct: 62  VFFGGGTPSLVPPALIQDILVALEAQH----ATEITLEANPENLSLEYIQALALTSINRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+  +  L+ LGR H++S+AI A  L     F  +S DLIY LP Q+++ + ++L 
Sbjct: 118 SIGVQTFNDPLLKLLGRTHSSSKAIEAFMLCSQYGFSNVSADLIYGLPTQSISDFIVDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S  + H+S+Y LTI+  T FYK  K     +  ++   ++    + +    G   YE
Sbjct: 178 QAISLPIQHISIYNLTIDPHTSFYKHRKRILPSIADDDSLAEMALAAEELLENQGFTRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A S HN  YW    ++G+G  A   +    H +          +L+   ++ 
Sbjct: 238 LASYAKNQAASKHNTYYWTAKPFLGLGVSASQYL----HGIRSKNLSRISHYLRAAHQHL 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             +   E L   ++  E L + LRL + I    +       L  E   +        +  
Sbjct: 294 PTLESMEELPPNERIKETLALRLRLCDPIPFGVFPQ----ELVDEILMHPSISSLFTKDD 349

Query: 373 FSRLRCTQRGMTMLDSVIANLAV 395
            +     ++G    DS+   +  
Sbjct: 350 KA-FSLNKKGRLFHDSIAEEIMA 371


>gi|300312505|ref|YP_003776597.1| oxygen-independent coproporphyrinogen III oxidase [Herbaspirillum
           seropedicae SmR1]
 gi|300075290|gb|ADJ64689.1| oxygen-independent coproporphyrinogen III oxidase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 483

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/411 (20%), Positives = 168/411 (40%), Gaps = 28/411 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +  +     +L +Y+H PFC   C YC  N  V + +     ++     E+  
Sbjct: 50  DYLHAVSDRRSMSAWRALSLYLHIPFCDTICYYCACNKIVTKNRAKAALYLSYLKREISM 109

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  G   +  + FGGGTP+ +  + ++ ++D I   +T++ +   E +IE +P +V 
Sbjct: 110 QGSLFSGMNQVEQLHFGGGTPTYLSDEQMSDLMDHIRHCFTLAPDHVGEYSIEIDPRTVS 169

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           V      R+ G NRISLGVQ  + +    + R  +  + +  I  AR+  F  +S DLIY
Sbjct: 170 VERVHKLRQQGFNRISLGVQDFDPEVQLAVNRVQSEEQTLEIIRAARDAGFRSVSIDLIY 229

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +      L + ++ + D +++Y        LF    +  +  LPS +  +D+ +
Sbjct: 230 GLPKQNVMSMSRTLAKVIAASPDRIAVYNYAHMPQ-LFKTQRQIKEEDLPSADSKLDMLS 288

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSR 285
           L     ++ G     + + +           +   + N+  Y      D +  G  A S 
Sbjct: 289 LCIRQLTSAGYVYIGMDHFAKPTDDLAIAQQQGRLHRNFQGYSTHSETDLVACGVSAISA 348

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +     EK  + +   +  +   +     L  +      ++  L     +S+  
Sbjct: 349 VGGSYSQN----EKTLDDYYARLENSTLPIARGIQLGMDDVLRRLIIQRLMCNFELSINS 404

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            E+            ++E  + L+  G I +++   +    +G  ++ ++ 
Sbjct: 405 LEIAYPIVFREYFASEMEKLKQLEEDGLI-KIEPEWITVEPKGRLLIRNIC 454


>gi|284009198|emb|CBA76266.1| oxygen-independent coproporphyrinogen III oxidase [Arsenophonus
           nasoniae]
          Length = 462

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 172/405 (42%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S +    +      L +YVH PFC K C +C  N  V R+K   +N++     E+    Q
Sbjct: 44  SDFAIAASRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRHKHKVDNYLLVLEKEIIKQAQ 103

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R++  + +GGGTP+ ++   ++ ++  +  ++  + + EI+IE +P  +E++    
Sbjct: 104 LFTNRTVIQMHWGGGTPTYLDKSQLSQLMAMLKSHFNFAVDAEISIEIDPREIELHIIDH 163

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +Q    + R  + +   A +  AR   F   S DLIY LPKQT
Sbjct: 164 LRCEGFNRLSMGVQDFNKQVQHLVNRQQDEAFIFALVQRAREVGFNSTSIDLIYGLPKQT 223

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R L+ + D LS++        LF    K     LP+    + +   T    
Sbjct: 224 AETFAFTLERVLALSPDRLSVFNYAHMPH-LFAAQRKIKTQDLPTAEQKLAILQQTIFTL 282

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           + +G     + + +    E   +  N     N+  Y      D +G+G  A S +     
Sbjct: 283 TQNGYQFIGMDHFAKPKDELAIAQRNGVLHRNFQGYTTQQNCDLLGLGVSAISMLGDHYA 342

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K   ++ + +  + HA+ +   L+ +      ++  L     +   D E    
Sbjct: 343 QN----QKDLNAYYQAIENHQHAIWKGLSLTQDDCIRRDVIKTLICNFQLVYSDIEQRYQ 398

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D++  + +   G +   Q   L+ T +G  ++ ++ 
Sbjct: 399 IDFKDYFFADLQLLQPMIADGLVIVGQRE-LQITAKGRLLIRNIC 442


>gi|83720202|ref|YP_442332.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|83654027|gb|ABC38090.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           thailandensis E264]
          Length = 481

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/409 (18%), Positives = 153/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 60  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 119

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  +  ++  + + E+ +E +P +V+  
Sbjct: 120 VAPDLGRDRVTTQLHLGGGSPTFFAIDELARLMRALRDHFDFAPHAELGVEIDPRTVDER 179

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 180 TLQSLAALGFNRTSFGVQDFDPAVQEAVHRVQPLPMVERALAASRAAGFESVNIDLIYGL 239

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + D +++Y       + F       +  LP+    + ++  +
Sbjct: 240 PRQTPASFSRTLDEVIRLSPDRIAVYNYAHLP-SRFKAQRLIVESELPAAEDRLRIFIES 298

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 299 TRRLLDAGYVYIGLDHFAKPNDELSNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 357

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     LS++      ++M +     +   + 
Sbjct: 358 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALSADDLLRREVIMTVMCSTPVDFAEI 413

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 414 GRRHGVDFVRHFAHELAQLEPYRDAGLLT-IDAERIAITPKGRMFVRAI 461


>gi|167581228|ref|ZP_02374102.1| coproporphyrinogen III oxidase [Burkholderia thailandensis TXDOH]
 gi|167619315|ref|ZP_02387946.1| coproporphyrinogen III oxidase [Burkholderia thailandensis Bt4]
 gi|257138531|ref|ZP_05586793.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
          Length = 483

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 74/409 (18%), Positives = 153/409 (37%), Gaps = 32/409 (7%)

Query: 6   AYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+ 
Sbjct: 62  AYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREMEL 121

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R  + +  GGG+P+      +A ++  +  ++  + + E+ +E +P +V+  
Sbjct: 122 VAPDLGRDRVTTQLHLGGGSPTFFAIDELARLMRALRDHFDFAPHAELGVEIDPRTVDER 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
             Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY L
Sbjct: 182 TLQSLAALGFNRTSFGVQDFDPAVQEAVHRVQPLPMVERALAASRAAGFESVNIDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+QT   +   L   +  + D +++Y       + F       +  LP+    + ++  +
Sbjct: 242 PRQTPASFSRTLDEVIRLSPDRIAVYNYAHLP-SRFKAQRLIVESELPAAEDRLRIFIES 300

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
                  G     + + +    E        SLH  N+  Y      D +G G  A  +V
Sbjct: 301 TRRLLDAGYVYIGLDHFAKPNDELSNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGKV 359

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S     +++ + +      +     LS++      ++M +     +   + 
Sbjct: 360 GASYSQSTRS----LKTYYRQLDAGRLPIERGFALSADDLLRREVIMTVMCSTPVDFAEI 415

Query: 347 EMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
               G +        L +       G +  +   R+  T +G   + ++
Sbjct: 416 GRRHGVDFVRHFAHELAQLEPYRDAGLLT-IDAERIAITPKGRMFVRAI 463


>gi|260914559|ref|ZP_05921027.1| oxygen-independent coproporphyrinogen III oxidase [Pasteurella
           dagmatis ATCC 43325]
 gi|260631350|gb|EEX49533.1| oxygen-independent coproporphyrinogen III oxidase [Pasteurella
           dagmatis ATCC 43325]
          Length = 462

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 164/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            +        +  L +YVH PFC K C +C  N  + R++   + ++     E++    L
Sbjct: 45  DFIQAAQRYPNRPLSLYVHIPFCHKLCYFCACNKVITRHQHKADIYLDFLEKEIEMRAPL 104

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R  + + +GGGTP+ +     + ++  + K+++++ N EI+IE +P  +E+      
Sbjct: 105 FKNRITTQVHWGGGTPTYLTEAQSSRLMSMLHKHFSITRNAEISIEIDPREIELPMLDHL 164

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +   + + R  +     A +  AR   F   + DLIY LP Q +
Sbjct: 165 RHLGFNRMSMGVQDFNKDVQKAVNREQDEQFIEALLKRARELGFQSTNLDLIYGLPLQNV 224

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQ+ ++   D LS++       + F    K  +  LP+    + +         
Sbjct: 225 DTFMFTLQKVIALNPDRLSVFNYAHLP-SRFAGQAKIKNDQLPAPATKLTILQKMIETLG 283

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +    E        + + N+  Y      D +G+G  A S +     +
Sbjct: 284 DAGYSFIGMDHFAKPDDELAIAQQKGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQ 343

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  + +   V  +G A+ +   +S E      ++  L     ++    E     
Sbjct: 344 N----QKELKHYYADVDNSGIALHKGFVMSQEDCLRRDVIKQLICNFKLNFLPIEQQYDI 399

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                   D++    L + G +E  + + ++ + +G  ++ ++ 
Sbjct: 400 QFKTHFAEDLKLLEPLAKDGLLEIGEDN-IQVSAKGRLLIRNIC 442


>gi|121606662|ref|YP_983991.1| coproporphyrinogen III oxidase [Polaromonas naphthalenivorans CJ2]
 gi|120595631|gb|ABM39070.1| oxygen-independent coproporphyrinogen III oxidase [Polaromonas
           naphthalenivorans CJ2]
          Length = 468

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/407 (20%), Positives = 160/407 (39%), Gaps = 28/407 (6%)

Query: 5   SAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
            A      G  +    L +YVH PFC   C YC  N  + R+    E +++    E+   
Sbjct: 47  QALAQRRNGAAAMLLPLSLYVHIPFCESLCYYCACNKIITRHHERGETYLRYLSREVDLY 106

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L   +++S +  GGG+P+ +    +  ++  + ++++++ + E +IE +P +V+   
Sbjct: 107 TAHLGVGQTVSQLHLGGGSPTFLSDGELHELMAMLRRSFSLAPDGEYSIEVDPRTVDSAR 166

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALP 180
                  G NR+S GVQ  +    + + R   A +  + +  AR   F  ++ DLIY LP
Sbjct: 167 LAALAGLGFNRLSFGVQDFDPAVQKAVHRVQPAEQVFSLMAAARLMGFESINIDLIYGLP 226

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT   ++  L + L    D ++LY         F    +     LP     + + + + 
Sbjct: 227 QQTPESFDRTLAQVLQLRPDRIALYAYAHLPQ-RFKPQRRIDVDKLPDAGAKLSMLSRSL 285

Query: 241 SITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
           S     G     + + +           +   + N+  Y      D IG+G  A  +V  
Sbjct: 286 SAFQGAGYVYVGMDHFALPHDALAVAKRQGRLHRNFQGYSTQPDCDLIGLGVSAIGKVGA 345

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +      K  E +   + +    VV    LS +      ++M L  +  +  +  E+
Sbjct: 346 TYSQNT----KTLEEYYDYLDQGRLPVVRGLALSRDDLVRRGVIMALMCQGQLEFESIEL 401

Query: 349 LAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
               + +      L      Q QG +E V  + L+ T+ G   +  V
Sbjct: 402 AYLIDFNSYFAAELEILHGMQEQGLVE-VDATSLQITKMGWYFVRGV 447


>gi|194291144|ref|YP_002007051.1| coproporphyrinogen iii oxidase [Cupriavidus taiwanensis LMG 19424]
 gi|193224979|emb|CAQ70990.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Cupriavidus taiwanensis LMG 19424]
          Length = 485

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 149/401 (37%), Gaps = 26/401 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
               +         L +Y+H PFC   C YC  N  + R       ++     EM  +  
Sbjct: 47  HDALDACRADAPAPLSLYLHIPFCENICYYCGCNKIITRDHGRSARYVSYLGREMALVAG 106

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +L   R +    +GGGTP+ + P  +  ++  +  ++ ++   E +IE +P  V+ +   
Sbjct: 107 RLGARRQVIQSHWGGGTPTFLNPDEMRRVMALLNTHFDLAGEGEHSIEIDPRRVDRDRMA 166

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
              + G NR+SLGVQ  + +  + + R     E  A +  AR   F  +S DLIY LP Q
Sbjct: 167 LLAELGFNRVSLGVQDFDAEVQQAIHRIQPFQETRAVVDAARALGFRSVSLDLIYGLPHQ 226

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   T   
Sbjct: 227 TAARFGRTIDQVLALRPDRLSVYSYAHLPH-VFKPQRRIDEQALPPAGEKLDILVSTIER 285

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +A G     + + +           E     N+  Y      D +G+G  A   +    
Sbjct: 286 LTAEGYVYIGMDHFALPDDDLAVAQREGRLQRNFQGYSTHAGYDQVGLGISAIGAIAGRY 345

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            + A    +  + +   + +    +     ++ +      ++  L     + +   E   
Sbjct: 346 VQNA----RTLDDYYGALDQGRLPLARGVAMTGDDHLRREIIGDLMCHGVLDLPAIEARH 401

Query: 351 GRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTM 385
           G + +      L         G + R +  RL  T  G  +
Sbjct: 402 GIDFNEAFAAELAELERLAADGLVCR-EPGRLTVTPLGRLL 441


>gi|260773607|ref|ZP_05882523.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
 gi|260612746|gb|EEX37949.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           metschnikovii CIP 69.14]
          Length = 306

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/309 (33%), Positives = 155/309 (50%), Gaps = 10/309 (3%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           ++DGIA        +EIT+EANP ++E   F  YR AGV RIS+GVQS   + L  LGR 
Sbjct: 1   MIDGIAARIPFQPEIEITMEANPGTIEAERFAAYRIAGVTRISIGVQSFAAEKLAHLGRI 60

Query: 152 HNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
           H   EA+ A  LA  I     + DL++ LP Q++ Q   +L +A++    HLS YQLTIE
Sbjct: 61  HGQQEAVRAAKLAHTIGLKSFNLDLMHGLPDQSLAQALDDLDQAITLNPPHLSWYQLTIE 120

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW 270
             TLFY         LP ++   D++ L     +  G   YEIS +S  G +  HNLNYW
Sbjct: 121 PNTLFYSKPPT----LPDDDALWDIFELGHQKLTEAGYVQYEISGYSKPGYQCQHNLNYW 176

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSE-QQAD 328
           R+GDY+GIG GAH ++     R+  + + KHP  +L   +      +  E L +E  +  
Sbjct: 177 RFGDYLGIGCGAHGKLSFADGRIIRTTKIKHPRGYLAAYQNMVKPYLSDEQLVAESDRPF 236

Query: 329 EFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           EF M   RL E    +D+    G  L +     +      ++ +   +  + T+ G   L
Sbjct: 237 EFFMNRFRLLEACPKQDFITTTGLALSVIEPTIQWACEMNYLTQ-DATSWQITEHGKLFL 295

Query: 387 DSVIANLAV 395
           + ++A    
Sbjct: 296 NDLLAAFMA 304


>gi|294789262|ref|ZP_06754500.1| oxygen-independent coproporphyrinogen III oxidase [Simonsiella
           muelleri ATCC 29453]
 gi|294482687|gb|EFG30376.1| oxygen-independent coproporphyrinogen III oxidase [Simonsiella
           muelleri ATCC 29453]
          Length = 468

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 78/406 (19%), Positives = 157/406 (38%), Gaps = 24/406 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   +N +       + +Y+H PFC   C YC  N  + +     + ++     EM  
Sbjct: 48  EYIKTLDNVL-NANEKPVSLYIHIPFCNVICYYCGCNKVITKDTSKADEYLNYLEKEMAL 106

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           ++  L G   ++ + FGGGTP+ +  + +  +   I +++ +  N E +IE +P  V   
Sbjct: 107 LKPHLHGKHQLAQLHFGGGTPTFLSDEQLERVFKMIREHFELLPNGEYSIEIDPRKVSRE 166

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
           +     K G NR+S+G+Q  + +    + R     E    I  AR   F  +S DLIY L
Sbjct: 167 SVFKLAKLGFNRMSVGIQDFDPKVQAAVNRIQTIEETQNVIEAAREAGFKSISVDLIYGL 226

Query: 180 PKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           P Q++   +  L   L +   D ++LY        +F    +     +PS    +D+   
Sbjct: 227 PHQSVQSIKPTLDTVLTALNPDRIALYHYAHLPH-IFKPQRRIDTNAVPSSEEKLDILQY 285

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
              +          + + +           E     N+  Y      D + IG  +  ++
Sbjct: 286 AVHLLDEKDYVFIGMDHFAKPEDELAIALHEGRLQRNFQGYSTYADCDLVAIGVSSIGKI 345

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +     ++  + +   +  N   V+    L+ +      ++  L  R  + + D+
Sbjct: 346 GNTYSQN----QRLLDDYYADLDANKLPVMRGFILNEDDVLRRQIIQDLMCRFELELSDY 401

Query: 347 EMLAGRNLDIEC--ERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSV 389
            +        E     N+ + G IE       L+ T +G  ++ ++
Sbjct: 402 GIDFVNYFSEELPDLDNMAKLGLIEWNAVSGSLKVTPKGRFLIRNI 447


>gi|332665388|ref|YP_004448176.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332334202|gb|AEE51303.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 451

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 159/407 (39%), Gaps = 25/407 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +++  ++    Q    + +Y+H P+C K C YC  N  + +    ++ +I S L E    
Sbjct: 36  WIAHVQDAF--QVDRGISLYIHLPYCEKLCTYCGCNKRITKNHGVEQPYIASLLKEWHLY 93

Query: 63  RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +    R  I ++  GGGTP+   P  +  ++ GI K+  ++S+V+   EA+PSS    +
Sbjct: 94  LKNLPGRPLIKALHLGGGTPTFFHPDQLDTLIRGIFKHADIASDVDFGFEAHPSSTTRQH 153

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
            +     G  RIS+GVQ    + L  + R     E       AR +    +++DLI+ LP
Sbjct: 154 LETLYNLGFRRISVGVQDFAPEILEIINRQQTEEEVQQVTEWARELGYTSVNYDLIFGLP 213

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT       + +      D ++ Y        +        ++ LP       LY L +
Sbjct: 214 LQTPEHIRTTMHKLELLRPDRIAFYSYAHVP-WIKPSQRAYSEVDLPLGPAKRALYELGR 272

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYGDY-----IGIGPGAHSRVK 287
            +    G     + + +    E        +LH  N+  Y  Y     I +G  + S   
Sbjct: 273 DLLEEMGYVEIGMDHFALPTDELYKSMKRGTLHR-NFMGYTPYDTRLSIALGASSISDSW 331

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +     EK+ E + K V +    +V+    S E Q     ++ +  R G    D  
Sbjct: 332 DGFVQN----EKNIEDYQKSVEQGHFPIVKGHLFSEEDQIIRTHILNIMCRYGTDWSDPA 387

Query: 348 MLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +      DI      L+  G IE +    L+ T  G   L ++    
Sbjct: 388 LQTALFEDIIVRIEELEADGLIE-INGQSLKVTALGRPFLRNICLAF 433


>gi|167570614|ref|ZP_02363488.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis C6786]
          Length = 483

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 72/407 (17%), Positives = 150/407 (36%), Gaps = 26/407 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y          + +  L VY+H PFC   C +C  N  + +       ++   + EM+ +
Sbjct: 63  YREHLARRAAAERNPPLSVYLHLPFCESLCYFCACNKIITQDHGRTSAYVDYLIREMELV 122

Query: 63  RQLTGPRSISS-IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               G   +++ +  GGGTP+      +A ++  +  ++  + + E+ +E +P +V+ + 
Sbjct: 123 APHLGRDRVTTQLHLGGGTPTFFAIDELARLMRALRSHFDFAPHAELGVEIDPRTVDAHT 182

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
            Q   + G NR S GVQ  +      + R         A+  +R   F  ++ DLIY LP
Sbjct: 183 LQALAELGFNRTSFGVQDFDPSVQEAVHRIQPLPMVEHALAASRASGFESINIDLIYGLP 242

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT   +   L   +  + D +++Y       + F       +  LP     + ++  + 
Sbjct: 243 RQTPESFSRTLDEVIRLSPDRIAVYNYAHLP-SRFKAQRLIDESALPLAEDRLRIFIEST 301

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
                 G     + + +    E        SLH  N+  Y      D IG G  A  +V 
Sbjct: 302 RRLLDAGYVYIGLDHFAKPTDELSKALRERSLHR-NFQGYTTQAECDLIGFGISAIGKVG 360

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +   S     +++ + +      +     L+ +      ++M +     +      
Sbjct: 361 ASYSQSTRS----LKTYYRHLDAGRLPIERGFALTPDDLLRREIIMTVMCSTPLDFAVIG 416

Query: 348 MLAGRNLDIECERNLQ-----RQGFIERVQFSRLRCTQRGMTMLDSV 389
              G +        L      R+  +  +  +R+  T +G   + ++
Sbjct: 417 RKHGIDFARHFAAELAQLEPYREAGLLTIDANRIAITPKGRMFVRAI 463


>gi|328914607|gb|AEB55440.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Chlamydophila psittaci 6BC]
          Length = 375

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 184/389 (47%), Gaps = 23/389 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPR 69
           M   G + L +Y+H+PFC KKC YC F +     +     +  + L   +Q +  +    
Sbjct: 1   MLMNGKSPLALYIHFPFCSKKCHYCSFYTIPYNSES-VNLYCNAILQEGLQKLSTIKDTH 59

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++F GGGTPSLI P  +  I+  +A +       EIT+EANP  +     +      
Sbjct: 60  FIDTVFLGGGTPSLIPPHYLHNIIQTLAPHAQ-----EITLEANPEDLSEVYLRELLLTA 114

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
           VNRIS+G Q+  +  L+ LGR H+++ +I A+H         +S DLIY LP Q++  + 
Sbjct: 115 VNRISIGAQTFHDPLLKALGRIHSSAASIDAVHRCYEHGYNNISIDLIYGLPTQSLADFI 174

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +AL+  + H+SLY LT++  T FYK  +     + ++++   +    + + ++ G 
Sbjct: 175 ADLHQALTLPISHISLYNLTLDPHTSFYKHRRILASSIANDDILAAMSLSAEELLTSRGF 234

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+++++   A+S HNL YW    ++G+G  A   +    H+V          +L+ V
Sbjct: 235 SRYELASYAKPQAQSKHNLYYWTDKPFLGLGVSASQYM----HKVRSKNLSRISQYLRAV 290

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
           RKN       E L   ++  E L + LRL EG   KD+              +L     I
Sbjct: 291 RKNLPVHESTESLPENERIKEALALRLRLTEGARWKDF--------PAPLMESLASLPLI 342

Query: 369 ERV---QFSRLRCTQRGMTMLDSVIANLA 394
           + +       L   ++G    D++   + 
Sbjct: 343 KELFDSNNEFLFLNKQGRLFHDTIAEEIM 371


>gi|167563444|ref|ZP_02356360.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis EO147]
          Length = 483

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/407 (17%), Positives = 150/407 (36%), Gaps = 26/407 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y          + +  L VY+H PFC   C +C  N  + +       ++   + EM+ +
Sbjct: 63  YREHLARRAAAERNPPLSVYLHLPFCESLCYFCACNKIITQDHSRTSAYVDYLIREMELV 122

Query: 63  RQLTGPRSISS-IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               G   +++ +  GGGTP+      +A ++  +  ++  + + E+ +E +P +V+ + 
Sbjct: 123 APHLGRDRVTTQLHLGGGTPTFFAIDELARLMRALRSHFDFAPHAELGVEIDPRTVDAHT 182

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
            Q   + G NR S GVQ  +      + R         A+  +R   F  ++ DLIY LP
Sbjct: 183 LQALAELGFNRTSFGVQDFDPSVQEAVHRIQPLPMVEHALAASRASGFESINIDLIYGLP 242

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT   +   L   +  + D +++Y       + F       +  LP     + ++  + 
Sbjct: 243 RQTPESFSRTLDEVIRLSPDRIAVYNYAHLP-SRFKAQRLIDESALPLAEDRLRIFIEST 301

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
                 G     + + +    E        SLH  N+  Y      D +G G  A  +V 
Sbjct: 302 RRLLDAGYVYIGLDHFAKPTDELSNALRERSLHR-NFQGYTTQAECDLLGFGISAIGKVG 360

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +   S     +++ + +      +     L+ +      ++M +     +      
Sbjct: 361 ASYSQSTRS----LKTYYRHLDAGRLPIERGFALTPDDLLRREIIMTVMCSTPLDFAVIG 416

Query: 348 MLAGRNLDIECERNLQ-----RQGFIERVQFSRLRCTQRGMTMLDSV 389
              G +        L      R+  +  +  +R+  T +G   + ++
Sbjct: 417 RKHGIDFARHFAAELAQLEPYREAGLLTIDANRIAITPKGRMFVRAI 463


>gi|167837260|ref|ZP_02464143.1| coproporphyrinogen III oxidase [Burkholderia thailandensis MSMB43]
          Length = 483

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/410 (17%), Positives = 152/410 (37%), Gaps = 32/410 (7%)

Query: 5   SAYENNMTGQGS----NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            AY  +++ + S      L VY+H PFC   C +C  N  + +       ++   + EM+
Sbjct: 61  HAYREHLSRRASAERNPPLSVYLHLPFCESLCYFCACNKIITQDHTRTSAYVDYLIREME 120

Query: 61  WMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +   L   R  + +  GGG+P+      +A ++  +  ++  + + E+ +E +P +V+ 
Sbjct: 121 LVAPDLGRDRLTTQLHLGGGSPTFFAIDELARLMRALRGHFEFAPHAELGVEIDPRTVDE 180

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              Q     G NR S GVQ  +      + R         A+  +R   F  ++ DLIY 
Sbjct: 181 RTLQSLAALGFNRTSFGVQDFDPSVQEAVHRIQPLPMVERALAASRAAGFESVNIDLIYG 240

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP+QT   +   L   +  + D +++Y       + F       +  LP+    + ++  
Sbjct: 241 LPRQTPASFSRTLDEVIRLSPDRIAVYNYAHLP-SRFKAQRLIVESELPAAEDRLRIFIE 299

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
           +       G     + + +    E        SLH  N+  Y      D +G G  A  +
Sbjct: 300 STRRLLDAGYVYIGLDHFAKPVDELSNALRERSLHR-NFQGYTTQAECDLVGFGVSAIGK 358

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +   S     +++ + +      +     L+ +      ++M +     +   +
Sbjct: 359 VGASYSQSTRS----LKTYYRQLDAGRLPIERGFALTPDDLLRREVIMTVMCSTPVDFAE 414

Query: 346 WEMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
                G +        L +       G +  +   R+  T +G   + ++
Sbjct: 415 IGRRHGIDFTRYFASELAQLEPYRDAGLLT-IDAERIAVTPKGRMFVRAI 463


>gi|159043094|ref|YP_001531888.1| coproporphyrinogen III oxidase [Dinoroseobacter shibae DFL 12]
 gi|157910854|gb|ABV92287.1| oxygen-independent coproporphyrinogen III oxidase [Dinoroseobacter
           shibae DFL 12]
          Length = 454

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/410 (20%), Positives = 156/410 (38%), Gaps = 31/410 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +LSA +       S  + +YVH PFC + C YC  N  + + +     ++++ L E+  +
Sbjct: 42  WLSALD------ASEPISLYVHIPFCREMCWYCGCNMKLVKREGPLAEYVETLLKEIALV 95

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           R     R  ++ + +GGGTP+ + P  IA I+D +  ++ +  + EI IE++P ++    
Sbjct: 96  RAAMPGRVPVAHLHWGGGTPTALSPDQIARIMDALRASFDILPDAEIAIESDPRTLTEPM 155

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALP 180
                + G NR S GVQ  + +  R + R         A+ +  R+    ++FDLIY LP
Sbjct: 156 VARLAELGFNRASFGVQEFDPKVQRAINRIQPPEMVAKAVGMFRRHGIAAVNFDLIYGLP 215

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++      +        D ++L+        +        +  LP         +   
Sbjct: 216 YQSVETLLHTVDLVSEMGPDRIALFGYAHVP-WVAKAQRMIPEESLPDARARAAQASAAA 274

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
              +  G  A  I + +          AE     N+  Y D      +G+G  +  R   
Sbjct: 275 RALTEAGYRAIGIDHFAKPEDGLARAQAEGRLYRNFQGYTDDPAATLVGLGATSIGRTPQ 334

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G     I  +    +W + +      V +    + E      ++  +     +       
Sbjct: 335 G----YIQNQPETRAWARAIENGALPVAKGRAFAGEDLMRAAVIERIMCDGYVDPDAIGA 390

Query: 349 LAGRNL-----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G        + +  R+++R G ++      LR T +G  +   V A  
Sbjct: 391 RYGVPAGWWGPERDSLRDMERDGLVQCGATG-LRVTSKGAPLARVVAAAF 439


>gi|291619505|ref|YP_003522247.1| HemN [Pantoea ananatis LMG 20103]
 gi|291154535|gb|ADD79119.1| HemN [Pantoea ananatis LMG 20103]
          Length = 459

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + + + +      +L +Y+H PFC + C +C  N  V R     + ++ +   E+     
Sbjct: 41  NDFRHAIERYPQRALSLYIHIPFCHRLCYFCGCNKIVTRQLHKADRYLNALEQEITARAP 100

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +  Q I+ ++  + +++T   + E++IE +P  +E++    
Sbjct: 101 LFKGRQVSQLHWGGGTPTFLNKQQISRLVALLKQHFTFIDDAEMSIEVDPREIELDMIDH 160

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +     + R  + +   A +  AR   F   S DLIY LP QT
Sbjct: 161 LRACGFNRLSMGVQDFNKAVQERVNRVQDEAVIFALMARAREQGFRSTSIDLIYGLPLQT 220

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR ++   D LS++        LF    K  +  LPS    +D+   T +  
Sbjct: 221 PESFAYTLQRVIALDPDRLSVFNYAHLPA-LFSAQRKIKEDELPSAQQKLDILQQTITTL 279

Query: 244 SAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 280 TQQGYQFIGMDHFAKPQDELAVAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMIGDSYA 339

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD------ 345
           +     +K    W   V K GH +     LS +      ++  L     +          
Sbjct: 340 QN----QKGLNDWYSQVEKQGHGLWRGLLLSEDDCLRRDVIKRLICNFSLDFSTVEAQWN 395

Query: 346 --WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             +E       D+     L   G +E+     LR T  G  ++ ++ 
Sbjct: 396 IQFERYFAE--DMALLEPLISDGLVEQHATD-LRVTGAGRLLIRNIC 439


>gi|329942768|ref|ZP_08291547.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
 gi|332287362|ref|YP_004422263.1| putative coproporphyrinogen III oxidase [Chlamydophila psittaci
           6BC]
 gi|313847944|emb|CBY16940.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila psittaci RD1]
 gi|325507351|gb|ADZ18989.1| putative coproporphyrinogen III oxidase [Chlamydophila psittaci
           6BC]
 gi|328815028|gb|EGF85017.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
          Length = 373

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 23/385 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISS 73
           G + L +Y+H+PFC KKC YC F +     +     +  + L   +Q +  +     I +
Sbjct: 3   GKSPLALYIHFPFCSKKCHYCSFYTIPYNSES-VNLYCNAILQEGLQKLSTIKDTHFIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSLI P  +  I+  +A +       EIT+EANP  +     +      VNRI
Sbjct: 62  VFLGGGTPSLIPPHYLHNIIQTLAPHAQ-----EITLEANPEDLSEVYLRELLLTAVNRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G Q+  +  L+ LGR H+++ +I A+H         +S DLIY LP Q++  +  +L 
Sbjct: 117 SIGAQTFHDPLLKALGRIHSSAASIDAVHRCYEHGYNNISIDLIYGLPTQSLADFIADLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LT++  T FYK  +     + ++++   +    + + ++ G   YE
Sbjct: 177 QALTLPISHISLYNLTLDPHTSFYKHRRILASSIANDDILAAMSLSAEELLTSRGFSRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A+S HNL YW    ++G+G  A   +    H+V          +L+ VRKN 
Sbjct: 237 LASYAKPQAQSKHNLYYWTDKPFLGLGVSASQYM----HKVRSKNLSRISQYLRAVRKNL 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV- 371
                 E L   ++  E L + LRL EG   KD+              +L     I+ + 
Sbjct: 293 PVHESTESLPENERIKEALALRLRLTEGARWKDF--------PAPLMESLASLPLIKELF 344

Query: 372 --QFSRLRCTQRGMTMLDSVIANLA 394
                 L   ++G    D++   + 
Sbjct: 345 DSNNEFLFLNKQGRLFHDTIAEEIM 369


>gi|167570927|ref|ZP_02363801.1| coproporphyrinogen III oxidase [Burkholderia oklahomensis C6786]
          Length = 464

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 88/410 (21%), Positives = 154/410 (37%), Gaps = 30/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R++S + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVSQLHWGGGTPTFLSDAETTELMAATREYFTLASDRAGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDRDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +  D  LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHMPH-LFKMQRQIDDAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   + +    +V    LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALAEQRLPIVRGLKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +E   G     +  R L      +R G +  +    L     G   + ++
Sbjct: 396 FEAAYGIRFANKFARELDTLRGFERDGLLS-IGGDHLTIHPAGRLYVRNI 444


>gi|319763990|ref|YP_004127927.1| oxygen-independent coproporphyrinogen iii oxidase [Alicycliphilus
           denitrificans BC]
 gi|330823746|ref|YP_004387049.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
 gi|317118551|gb|ADV01040.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans BC]
 gi|329309118|gb|AEB83533.1| oxygen-independent coproporphyrinogen III oxidase [Alicycliphilus
           denitrificans K601]
          Length = 460

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 156/410 (38%), Gaps = 28/410 (6%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y+ A +    G  +    L +YVH PFC   C YC  N  + R+    E +++    E+
Sbjct: 36  EYILALQQRRVGSAAKAMPLSLYVHIPFCESLCYYCACNKIITRHPERAEVYLRYLSREI 95

Query: 60  QWMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                  G  + +S + FGGGTP+ +    +  ++  + +++ +    E +IE +P +V+
Sbjct: 96  DLHTAHCGVGQHVSQLHFGGGTPTFLSDDGLRELIGMLKRSFVLVPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                   + G NR+S GVQ  + +  + + R   A +  A I  AR   F  ++ DLIY
Sbjct: 156 EKRLALLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEKVFALIESARKLGFESVNVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   ++  L +      D ++LY         F    +     LP  +  V +  
Sbjct: 216 GLPRQTPESFDRTLAQVAQLRPDRIALYAYAHLPE-RFKSQRRIISAELPMASAKVSMLA 274

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
            +  +    G     + + +           +   + N+  Y      D I +G  A  R
Sbjct: 275 RSIDVFMNAGYVYVGMDHFALPEDALAVAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGR 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K  + +   +      +V    L+ +      ++M L  +  +  + 
Sbjct: 335 VGATYSQNV----KTLDEYYDAINHGHLPIVRGLALTRDDLVRRAVIMALMCQGEVLFEP 390

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
            E     +     E  LQ+      QG ++      +  T  G   +  V
Sbjct: 391 VEQSWLIDFRRYFEAELQQLEEMAEQGLVKVGAEG-IEVTTMGWFFVRGV 439


>gi|221067711|ref|ZP_03543816.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
 gi|220712734|gb|EED68102.1| oxygen-independent coproporphyrinogen III oxidase [Comamonas
           testosteroni KF-1]
          Length = 460

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 146/410 (35%), Gaps = 28/410 (6%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+ A +   T  GS    L VYVH PFC   C YC  N  V ++      ++     E+
Sbjct: 36  DYILALKQRKTHSGSRALPLSVYVHVPFCESLCYYCACNKIVTKHHEKAAEYLDYLGREL 95

Query: 60  QWMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
               +  G    +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V 
Sbjct: 96  AMHTEHCGKGQLVSQLHLGGGTPTFFSDAELQQLMLLMREHFKLDPAGEYSIEVDPRTVS 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +  +  G NR+S GVQ  +    + + R   A +    +  AR   F  ++ DLIY
Sbjct: 156 NERLKTLKDMGFNRLSFGVQDFDPAVQKAVHREQPAEQVFELVAEARRLGFVSINVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQT   +   L +      D ++LY         F    +     LP     +++ +
Sbjct: 216 GLPKQTSESFARTLAQVNELRPDRIALYAYAHLPE-RFKPQRRIASADLPMGQEKLNMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
                    G     + + +           +   + N+  Y      D I +G  A  +
Sbjct: 275 GAIDAFMNGGYVYVGMDHFALPDDSLAIAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGK 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K  E +   +      V     LS +      ++M +  +  +  + 
Sbjct: 335 VGATYSQNV----KTLEEYYDAIDGGMLPVQRGLALSRDDLVRRAIIMAIMCQGSVLYEP 390

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
            E     N      R L      QR G ++       + T  G   +  V
Sbjct: 391 MEQAWLINFREYFARELAALAEMQRNGLVQLSDEG-FKVTGLGWFFVRGV 439


>gi|157373231|ref|YP_001471831.1| coproporphyrinogen III oxidase [Shewanella sediminis HAW-EB3]
 gi|157315605|gb|ABV34703.1| Coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 446

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 169/408 (41%), Gaps = 29/408 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K L++ EN+     S+ L +YVH PFC K C YC  N  + R++   + +I+    E+  
Sbjct: 29  KLLTSIENS----KSDKLSLYVHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVK 84

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L     ++ I +GGGTP+ + P  I  +   I  ++ V+   E +IE +P  +E++ 
Sbjct: 85  RAPLFKNYLVTQIHWGGGTPTFLSPDQILKLSALIKSSFNVADEGEYSIEVDPREIELSM 144

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
               ++AG NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP
Sbjct: 145 LDTLKEAGFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMAKAKELGFVSTNIDLIYGLP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +   +QR L    D LS++         F    K  D  L S    +D+ + T 
Sbjct: 205 HQTPETFAETMQRVLDLNPDRLSVFNYAHLPA-RFAAQRKIKDEDLASPQQKLDMLHQTI 263

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
              +  G     + + +           E   + N+  Y      D +G+G  + S++  
Sbjct: 264 ETLTGAGYQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGD 323

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +     +K    + + V K+GHA+ +   L+ + +    ++  L     + +   + 
Sbjct: 324 CYAQN----QKDIRPYYESVDKSGHALWKGCSLNRDDEIRRVVIKQLICHFELDMAQIDE 379

Query: 349 LAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             G N +     +L           ++     ++  +  G  ++ ++ 
Sbjct: 380 KLGINFEEYFVEDLKLLQTFIDDKLVDITD-RKITISPTGRLLIRNIC 426


>gi|327395813|dbj|BAK13235.1| oxygen-independent coproporphyrinogen III oxidase HemN [Pantoea
           ananatis AJ13355]
          Length = 457

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 29/407 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + + + +      +L +Y+H PFC + C +C  N  V R     + ++ +   E+     
Sbjct: 39  NDFRHAIERYPQRALSLYIHIPFCHRLCYFCGCNKIVTRQLHKADRYLNALEQEITARAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +  Q I+ ++  + +++T   + E++IE +P  +E++    
Sbjct: 99  LFKGRQVSQLHWGGGTPTFLNKQQISRLVALLKQHFTFIDDAEMSIEVDPREIELDMIDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   +     + R  + +   A +  AR   F   S DLIY LP QT
Sbjct: 159 LRACGFNRLSMGVQDFNKAVQERVNRVQDEAVIFALMARAREQGFRSTSIDLIYGLPLQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   LQR ++   D LS++        LF    K  +  LPS    +D+   T +  
Sbjct: 219 PESFAYTLQRVIALDPDRLSVFNYAHLPA-LFSAQRKIKEDELPSAQQKLDILQQTITTL 277

Query: 244 SAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           E   + N+  Y      D +G+G  A S +     
Sbjct: 278 TQQGYQFIGMDHFAKPQDELAVAQREGKLHRNFQGYTTQGDSDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD------ 345
           +     +K    W   V K GH +     LS +      ++  L     +          
Sbjct: 338 QN----QKGLNDWYSQVEKQGHGLWRGLLLSEDDCLRRDVIKRLICNFSLDFSTVEAQWN 393

Query: 346 --WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             +E       D+     L   G +E+     LR T  G  ++ ++ 
Sbjct: 394 IQFERYFAE--DMALLEPLISDGLVEQHATD-LRVTGAGRLLIRNIC 437


>gi|293604687|ref|ZP_06687087.1| oxygen-independent coproporphyrinogen III oxidase [Achromobacter
           piechaudii ATCC 43553]
 gi|292816856|gb|EFF75937.1| oxygen-independent coproporphyrinogen III oxidase [Achromobacter
           piechaudii ATCC 43553]
          Length = 476

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 81/411 (19%), Positives = 157/411 (38%), Gaps = 24/411 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y  A            L +YVH PFC   C YC  N  V R+      ++ +   E+  
Sbjct: 54  DYRLALRQRRAVSPVEPLSLYVHIPFCDSVCYYCACNKVVTRHHDRAARYLDALTREITM 113

Query: 62  -MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +L     +S + FGGGTP+ +    +A ++  +   +  S++ EI+IE +P +    
Sbjct: 114 HVEELGAGVPVSQLHFGGGTPTFLSDAELARLMQDLRAGFRFSADAEISIEVDPRTATPE 173

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYAL 179
                R+ G NR+S GVQ  +E+  + + R  +  +  A +  AR++    ++ DLIY L
Sbjct: 174 RLAHLRRLGFNRLSFGVQDFDERVQKAVHRVQSFEDVRALMQSARSLGYESVNMDLIYGL 233

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +   +++ ++   D ++LY         F    +  +  LP+    V L +  
Sbjct: 234 PLQTTESFARTIKQVVALRPDRIALYAYAHLPE-RFKPQRRIHEADLPNRETRVGLLSAA 292

Query: 240 QSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
                  G     + + +               + N+  Y      D + +G  A  R+ 
Sbjct: 293 IDGFLQQGYTYIGMDHFALNTDALAIAKQRGELHRNFQGYSTQPDRDLVALGVSAIGRIG 352

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      K  +++   +     AV     LSS+      ++M +  +  +     E
Sbjct: 353 NTYSQN----SKVLDTYYAAIESGHFAVERGLCLSSDDLVRREVIMDIMCQGRVDFAAVE 408

Query: 348 MLAGRNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G        R L +     +  +  ++  +++ T  G   + +V    
Sbjct: 409 ARHGLRFGDYFSRELLQMANLAELGLVNLRAGQVQVTGLGWYFVRAVAMAF 459


>gi|264677954|ref|YP_003277861.1| oxygen-independent coproporphyrinogen III [Comamonas testosteroni
           CNB-2]
 gi|262208467|gb|ACY32565.1| oxygen-independent coproporphyrinogen III [Comamonas testosteroni
           CNB-2]
          Length = 460

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 147/412 (35%), Gaps = 32/412 (7%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+ A +   T  GS    L VYVH PFC   C YC  N  V ++      ++     E+
Sbjct: 36  DYILALKQRKTHSGSRALPLSVYVHVPFCESLCYYCACNKIVTKHHEKAAEYLDYLSREL 95

Query: 60  QWMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
               +  G    +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V 
Sbjct: 96  AMHTEHCGKGQLVSQLHLGGGTPTFFSDAELQQLMVLMREHFKLDPAGEYSIEVDPRTVS 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +  +  G NR+S GVQ  +    + + R   A +  A +  AR   F  ++ DLIY
Sbjct: 156 NERLRALKDMGFNRLSFGVQDFDPAVQKAVHREQPAEQVFALVAEARRLGFVSINVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   +   L +      D ++LY         F    +     LP     +++ +
Sbjct: 216 GLPRQTPESFARTLAQVNELRPDRIALYAYAHLPE-RFKPQRRIESADLPMGQDKLNMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
                    G     + + +           +   + N+  Y      D I +G  A  +
Sbjct: 275 GAIDAFMDGGYVYVGMDHFALPDDSLAIAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGK 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K  E +   V      V     LS +      ++M +  +  +  + 
Sbjct: 335 VGATYSQNV----KTLEEYYDAVDGGMLPVQRGLALSRDDLVRRAVIMSIMCQGSVLYEP 390

Query: 346 --------WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                   +       LD      +QR G +E       + T  G   +  V
Sbjct: 391 MEQAWLINFREYFAAELD--ALAEMQRNGLVELSAEG-FKVTGLGWFFVRGV 439


>gi|157959926|ref|YP_001499960.1| coproporphyrinogen III oxidase [Shewanella pealeana ATCC 700345]
 gi|157844926|gb|ABV85425.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           pealeana ATCC 700345]
          Length = 446

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 164/401 (40%), Gaps = 25/401 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L   
Sbjct: 32  TSIKNSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKN 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P+ I  +   I  N+ V+   E +IE +P  +E++     ++A
Sbjct: 92  YLVTQIHWGGGTPTFLTPEQILKLSALIKANFNVADVGEYSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 152 GFNRISIGVQDFNKKVQVAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETF 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L    D LS++       + F    K  D  L S    +D+ + T    +  G
Sbjct: 212 AETMQRVLDLNPDRLSVFNYAHLP-SRFAAQRKIKDEDLASPQQKLDMLHQTIETLTGAG 270

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 271 YQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 328

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +K    + + +  NGHA+ +   L+ + +    ++  L     + +   E     N +
Sbjct: 329 --QKDIRPYFESIDANGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAKIEEKLNINFE 386

Query: 356 IECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L           ++     ++  +  G  ++ ++ 
Sbjct: 387 EYFAEDLKLLQTFIDDKLVDITD-RKITISPTGRLLIRNIC 426


>gi|312904055|ref|ZP_07763223.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0635]
 gi|310632531|gb|EFQ15814.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Enterococcus faecalis TX0635]
          Length = 289

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 92/290 (31%), Positives = 150/290 (51%), Gaps = 9/290 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIF 168
           +EANP  +     Q  +  GVNR+S+GVQ+ +++ L+ +GR H A++    +  L +  F
Sbjct: 1   MEANPGDLTQEKLQVMKNYGVNRLSMGVQTFDDRLLKKIGRKHTAADVYETMKFLEKENF 60

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             +S DLIYALP QT+  +   L RAL+  + H SLY L +E  T+F    + G L LP 
Sbjct: 61  TNVSIDLIYALPGQTLESFRDALTRALALDLPHYSLYSLILENKTMFMNWVRQGRLQLPE 120

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           E +   +++ T       G H YE+SN +  G ES HNL YW    Y G G GA   +  
Sbjct: 121 EEIEAQMFDETIEAMEKKGRHQYEVSNFALTGKESQHNLAYWNNDHYYGFGAGASGYLGQ 180

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
             ++    I    + +LK +R+N   +VE E L+   Q +E L +GLR + GIS + ++ 
Sbjct: 181 TRYKNHGPI----QHYLKPLRENQLPIVETEELTRLNQIEEELFLGLRKKVGISKQKFQQ 236

Query: 349 LAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                ++    E  + L ++  +   +   LR T++G+ + ++V     +
Sbjct: 237 KFQEPIEAIYGEVIQRLIKEELLIE-EADILRLTKKGLFVGNNVFEAFLL 285


>gi|297539102|ref|YP_003674871.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
 gi|297258449|gb|ADI30294.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           sp. 301]
          Length = 488

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 81/411 (19%), Positives = 155/411 (37%), Gaps = 30/411 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A E       +  L +YVH PFC   C +C  N  V ++      +++    E+   
Sbjct: 63  YKLALEQRSIAGAALPLSIYVHIPFCESLCFFCACNKIVTKHHERSAEYLRYLNREIDLH 122

Query: 63  RQLTGPRS-----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
            +  G +      IS +  GGGTP+      +  +++ + +N+  + N E +IE +P +V
Sbjct: 123 MEHLGTKKGSVHTISQLHLGGGTPTFFSDDELTELMNMLKRNFFFTPNGEYSIEVDPRTV 182

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                +   + G NR+S GVQ  + +  + + R   A +  + +  AR + F  ++ DLI
Sbjct: 183 NEQRLKHLAELGFNRLSFGVQDFDPEVQKAVHRIQPAEQVFSLVEAARRLKFDSINVDLI 242

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT   +   L + +    + ++LY         F    +  +  LP+    + + 
Sbjct: 243 YGLPMQTPESFTRTLNQIVELRPNRIALYGYAHLPE-RFKPQRRISEYELPAAPDKIAML 301

Query: 237 NLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHS 284
           +         G     + + +           +   + N+  Y      D I +G  A  
Sbjct: 302 SNALKAFIEDGYVYVGMDHFALPDDDLAIAKRQGRLHRNFQGYSTQPDCDLISLGVSAIG 361

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           RV     + A    K  E +   + +    VV    LS +      ++M +  +  +  +
Sbjct: 362 RVGATYSQNA----KTIEEYYDYLNQGRFPVVRGLALSRDDLIRRAVIMAIMCQGALQYE 417

Query: 345 DWEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
             E+    +        L      Q  G +E      L+ T  G   + ++
Sbjct: 418 SIELAYVIDFKTYFANELTLLKEQQAIGMVELEDGG-LQVTDTGWFFVRAI 467


>gi|308188686|ref|YP_003932817.1| O2-independent coproporphyrinogen III oxidase [Pantoea vagans C9-1]
 gi|308059196|gb|ADO11368.1| O2-independent coproporphyrinogen III oxidase [Pantoea vagans C9-1]
          Length = 457

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 89/405 (21%), Positives = 167/405 (41%), Gaps = 27/405 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            ++  +       L +YVH PFC + C +C  N  V R +   + ++     E+     L
Sbjct: 40  DFQRAVARYPDRPLSLYVHIPFCHRLCYFCGCNKIVTRQRHKADRYLDVLEQEIIQRAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ + +GGGTP+ ++   I+ ++  + ++++V+S+VE++IE +P  +E++     
Sbjct: 100 FRQRQVTQLHWGGGTPTFLDNAQISRLVGLLKQHFSVASDVEMSIEIDPREIELDMIDHL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NR+S+GVQ   +     + R  +       +  AR   F  +S DLIY LP QT 
Sbjct: 160 RSLGFNRLSMGVQDFNKAVQERVNRVQDEEVIFGLMARAREQGFSSVSIDLIYGLPLQTP 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+R L+   D LS++        +F    K  +  LPS    +D+   T +  +
Sbjct: 220 ASFAWTLERVLALNPDRLSVFNYAHLPA-MFAAQRKIKEDELPSAQQKLDILQQTITTLT 278

Query: 245 AHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
             G     + + +    E         LH  N+  Y      D +G+G  A S +     
Sbjct: 279 QQGYQFIGMDHFAKPQDELAIAQRKGQLHR-NFQGYTTQGDSDLLGLGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K   +W K V + G+ +     L+ +      ++  L     +     E   G
Sbjct: 338 QN----QKDLNTWYKSVEQQGNGLWRGIALTDDDCLRRDVIKTLICNFSLDFAATEAQWG 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                    D+   + L   G + +     L  T  G  ++ ++ 
Sbjct: 394 ICFSDYFAEDLALLKPLIADGLLVQTAGG-LEVTGIGRLLIRNIC 437


>gi|268316920|ref|YP_003290639.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
 gi|262334454|gb|ACY48251.1| oxygen-independent coproporphyrinogen III oxidase [Rhodothermus
           marinus DSM 4252]
          Length = 458

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 159/408 (38%), Gaps = 27/408 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
              +        L +YVH PFC   C YC  +  V         ++     E+  + +  
Sbjct: 40  IRADNERPDPEPLSLYVHLPFCRTLCYYCGCHMIVTHRPEKIARYLDYLEREIALVSRWV 99

Query: 67  GP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            P R +  + +GGGTP+ + P+ I  ++D + +++  + + EI IEA+P  +   + +  
Sbjct: 100 APDRPVVQLHWGGGTPTYLAPEQILALMDLLRRHFRFAPDAEIGIEADPRGLTRAHLEAA 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R AG NRIS GVQ L+    + + R     +       AR   F  +S+DLIY LP Q +
Sbjct: 160 RTAGFNRISFGVQDLDPTVQQAINRVQPYEQVARITRWARELGFESISYDLIYGLPHQHL 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           TQ+E  +++ +    D +SL+                 +  LP     + L+     + +
Sbjct: 220 TQFERTIRQVIDLGPDRISLFSYAHVP-WKKKHQRLIREEWLPRPAEKLQLFLRAVELLT 278

Query: 245 AHGLHAYEISNHSFLGAESLHN--------LNYWRY-----GDYIGIGPGAHSRVKVGSH 291
             G + Y   +H     + L           N+  Y      +    G  A S+++    
Sbjct: 279 TEGGYRYIGMDHFARPEDPLSRALDEGTLQRNFQGYSTHGGTELYAFGISAISQLRDAYV 338

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +  +++ +    +   + +    V +   L+ E +    ++M L     + V + E   G
Sbjct: 339 QNVLTLPE----YYAALDRGHLPVGKGYVLTDEDRLRRHVIMALMCHFRLDVPEVERRFG 394

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +        L      +  G + R +   +  T+ G   + +V    
Sbjct: 395 IDFHAHFADALAQLEEMEADGLVVR-RPDVIEVTESGRFFIRNVAMAF 441


>gi|123969042|ref|YP_001009900.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. AS9601]
 gi|123199152|gb|ABM70793.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. AS9601]
          Length = 407

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 122/407 (29%), Positives = 197/407 (48%), Gaps = 41/407 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---------QENFIQSFLTEMQWMRQLTGP 68
               YVH PFC ++C YCDF       KV           + ++Q    E+  ++     
Sbjct: 5   PRSAYVHIPFCHRRCFYCDFAVIPLGNKVETLKGYGSKTVQEYLQFLFKEILSIKH---K 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +S+I+ GGGTPS+++P  I  ++D   +N+ +    EIT+E +P+S   ++  G+  A
Sbjct: 62  SPLSTIYIGGGTPSILDPSQIKELIDLFKENYGIDYGAEITMEIDPASFTQDDLFGFINA 121

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-----NIFPRMSFDLIYALPKQT 183
           G+NR SLGVQS   Q L+  GR H   +A  +    +      +    S DLI  LP   
Sbjct: 122 GINRFSLGVQSFNNQVLQKSGRRHLKEDAEKSCFWLKREYDSGLIKSWSLDLIQNLPLSG 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +W+ +L++A++++  HLS+Y L IE GT+F K+   G L LPS+  AV     T  I 
Sbjct: 182 FKEWQDDLKKAITFSPPHLSIYDLNIENGTVFKKLVNLGKLKLPSDEEAVRNSESTHLIL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN+   G +S HN  YW    + G G G+ S    G       + K  + 
Sbjct: 242 KNLGYSRYEISNYCLPGHQSRHNRVYWSGLGWWGFGQGSTSS-PWGEKLTRPRVSKEYKE 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISV-----------KDWEM 348
           W+  +R+    +     L+++     + DE +M+GLRL+EG+ +           K +E 
Sbjct: 301 WV--IRQYEFNLDSS--LTNKDFVYKELDEKIMLGLRLKEGLDIKKVFQEQNWENKKFES 356

Query: 349 LAGRNLDIECERNLQRQGFIERVQFSRLRCTQ-RGMTMLDSVIANLA 394
              + L  E ER L+  G + R  + R   ++  GM + + V+ ++ 
Sbjct: 357 NFSK-LLKEWERFLES-GLLVRKGY-RFFLSEPNGMELSNQVLVSMF 400


>gi|225848426|ref|YP_002728589.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643700|gb|ACN98750.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 462

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 70/405 (17%), Positives = 152/405 (37%), Gaps = 31/405 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PR 69
           +      L +Y H PFC   C +C  N  + R K   + ++     EM   + L     R
Sbjct: 50  SNDRKTPLSLYFHIPFCENACHFCGCNVIITRRKEVVKPYLDHLYKEMDLYKNLIDTNNR 109

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  + +GGGTP+ +  +    + + I K + +    E++IE +P  V+ +     ++ G
Sbjct: 110 KVVQLHWGGGTPNYLSDEETVELFNEIKKRFIIDPQAEVSIEIDPRHVDKDRIFLLKEIG 169

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S G+Q    +    + R          +   R   F  ++ DLIY LP QT+  + 
Sbjct: 170 FNRVSFGIQDFNPKVQEAVNRIQPEEMIFNVMSWLRQAGFESVNIDLIYGLPYQTLETFT 229

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHG 247
             +++ +    D ++++           ++ ++ D   LP     + +  +T    +  G
Sbjct: 230 ETIEKTIKLNPDRIAVFNFAYVP--WLKRLQRNIDEKTLPPPAEKLRILQMTIEKLTNAG 287

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      +  G G  + S +  G  +  
Sbjct: 288 YVFIGMDHFAKPNDELAIAQRERTLHR-NFQGYTTKAQAELFGFGATSISMLYDGYVQNY 346

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               K    + + +      +    +L+ +      ++M L     +   +       + 
Sbjct: 347 ----KVLRDYYETIDSGNLPIERGVYLNQDDIIRRDVIMKLMCHFRLVKSEISEKYNIDF 402

Query: 355 DIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           D   E  L      ++ G + ++   R+  T  G  ++ ++ +  
Sbjct: 403 DTYFETELNQLQDMEKDGLL-KLYPDRIDITPIGRLLIRNIASTF 446


>gi|167586407|ref|ZP_02378795.1| coproporphyrinogen III oxidase [Burkholderia ubonensis Bu]
          Length = 466

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 90/414 (21%), Positives = 159/414 (38%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N      +     ++     EM  
Sbjct: 45  DYVRAAGD--PGASSSELSLYFHIPFCNTACFYCGCNKIATGNRRRARPYLDQLKREMAL 102

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +     A ++    +++T+   ++ E +IE +P +V 
Sbjct: 103 QAALFDPARPVTQLHWGGGTPTFLSDDETAELMAATREHFTLAQDADAEFSIEIDPRTVT 162

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   +  +S DLIY
Sbjct: 163 PATLVHLRTIGFNRLSLGVQDFDPAVQQAINRIQPLAMTADLLSAARTTGYQSVSVDLIY 222

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     V L  
Sbjct: 223 GLPHQTVASFGRTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDAALPPPATRVALLG 281

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + +A G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 282 LAIEMLTAAGYVYIGMDHFARPGDELVAAQQNGTLQRNFQGYSTRADTDLIGIGVSSIGK 341

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      V     L+++ +    ++  L     +    
Sbjct: 342 VGDVYAQNA----KDLPAYGAALDAGRLPVARGVRLTADDRLRRDVITQLMCNLELPFSH 397

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G         +++  R  +R   +  +   RL     G  ++ ++    
Sbjct: 398 VEAAHGIRFADHFARELDALREFERDALLS-IAGDRLTIHPAGRMVVRNIAMAF 450


>gi|269941073|emb|CBI49457.1| putative oxygen-independent coproporphyrinogenIII oxidase
           [Staphylococcus aureus subsp. aureus TW20]
 gi|329314259|gb|AEB88672.1| Coproporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 321

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/326 (30%), Positives = 161/326 (49%), Gaps = 11/326 (3%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+ +    +  +L  I   +T++   E T EANP  +     Q   K GV RI
Sbjct: 1   MYVGGGTPTALSINQLERLLKAIRDTFTITG--EYTFEANPDELTKEKVQLLEKYGVKRI 58

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ + + L  LGR HN  +   ++  A+N     +S DL+Y LPKQT+  +E  L 
Sbjct: 59  SMGVQTFKPELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLD 118

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL   + H+S Y L +E  T FY M++ G L LP+E++  D+Y L  S       H YE
Sbjct: 119 LALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYE 178

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G ES HN  YW   +Y G G GA   V    +     +      ++K + K  
Sbjct: 179 ISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVN----HYIKAINKES 234

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIE 369
            A++     S  ++ +E + +GLRL EG+S   ++    ++++    +   NL+ +  I 
Sbjct: 235 KAILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIV 294

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             +   +  T RG  + + V     +
Sbjct: 295 E-KNDVIALTNRGKVIGNEVFEAFLI 319


>gi|172037240|ref|YP_001803741.1| oxygen independent coprophorphyrinogen III oxidase 1 [Cyanothece
           sp. ATCC 51142]
 gi|171698694|gb|ACB51675.1| oxygen independent coprophorphyrinogen III oxidase 1 [Cyanothece
           sp. ATCC 51142]
          Length = 465

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 79/403 (19%), Positives = 164/403 (40%), Gaps = 30/403 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
                 L +Y H PFC   C +C  N+ +   K   + +++  + +++   +L  P R++
Sbjct: 51  NHKKTPLSLYCHIPFCETACYFCGCNTIITGNKKVADPYLEYLIKDIERTAELISPNRAV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + I +GGGTP+ +    I  + + + KN+ +  + EI+IE NP  ++ N     R+ G N
Sbjct: 111 NQIHWGGGTPNYLNQSQIDRLFNTLVKNFNIDKDAEISIEVNPRYLDRNLIFFLRQLGFN 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+Q  + +  + + R          +   R   F  ++ DLIY LP Q    ++  
Sbjct: 171 RISFGIQDFDPKVQKVINRVQPEEMLFNVMGWMREAEFESVNVDLIYGLPYQNRDTFKKT 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +Q+ +    D ++++           + +   D  LP+ +  + +  +T    + +    
Sbjct: 231 VQKTIELDPDRIAVFNFAYIPWIKPAQKNLPVD-ELPNASEKLAMLQMTIEEFNNNDYLF 289

Query: 251 YEISNHSFLG-----AESLH--NLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +        A+S    + N+  Y      D +  G  + S +    H V +   
Sbjct: 290 IGMDHFAKANDELAIAQSQGDLHRNFQGYTTKPESDLLAFGMTSISML----HDVYVQNH 345

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K  + + K + +    + +   LS +      ++M L  +  +     E     N D++ 
Sbjct: 346 KKIKDYYKALDEGHLPIEKGVTLSKDDIIRRAVIMELMCQSQLYKDRIEEKYNLNFDLDF 405

Query: 359 ----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                      + L+  G I  +   RL  T  G  ++ ++ A
Sbjct: 406 DEYFAQELIDLKPLEADGLIH-LHSDRLEVTNTGRWLIRNIAA 447


>gi|281413010|ref|YP_003347089.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           naphthophila RKU-10]
 gi|281374113|gb|ADA67675.1| oxygen-independent coproporphyrinogen III oxidase [Thermotoga
           naphthophila RKU-10]
          Length = 374

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/378 (28%), Positives = 183/378 (48%), Gaps = 16/378 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L VYVH PFC  KC YCDF S V       + +    L E+    ++     I + +FGG
Sbjct: 3   LAVYVHVPFCKSKCVYCDFYSVVS---EKFDEYFSHLLREIDLYEEVLRESEIKTAYFGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++ P  + ++L+ + +     + +EITIE NP SVE    + Y++ G+NRISLGVQ
Sbjct: 60  GTPSVVSPSFLGMVLEKLERVSRSFTPIEITIEVNPESVEPEKLKIYKQIGINRISLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + ++  L+  GR +N         +    F  ++FD I  LP +T    E   +    + 
Sbjct: 120 ACDDTVLKNTGRLYNEETLKKKAKIILERFENVNFDFILGLPSETDITLEKNFRFLEEFP 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+SLY L I++ T  + +   G + LP E      ++L        G   YEISN + 
Sbjct: 180 PQHVSLYLLEIDEKTKLFDLTTKGLVELPEEGDLERRHDLFVEFLKERGFVRYEISNFAK 239

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ESLHN+ YWR  +Y+G+G  A   +     R+        + + + + +        
Sbjct: 240 PEKESLHNIFYWRNENYLGLGVSAGGHIG----RLRYVNVSDLKEYEEKITRGELPYEYV 295

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG--FIERVQFSRL 376
              + E++A E + MGLR++EG+ +          + +     LQ++   ++E V+  ++
Sbjct: 296 HENTEEEEALETVFMGLRIKEGVELNR------VRILLPLLEKLQKKYPCYVE-VKNGKI 348

Query: 377 RCTQRGMTMLDSVIANLA 394
             ++ GM +   ++++L 
Sbjct: 349 FLSEDGMNLSKKILSDLI 366


>gi|293391534|ref|ZP_06635868.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952068|gb|EFE02187.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 455

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 82/404 (20%), Positives = 165/404 (40%), Gaps = 25/404 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            +           L +YVH PFC K C +C  N  + R++   + ++     E+Q   +L
Sbjct: 38  DFTAAAQRYPERPLSLYVHIPFCHKLCYFCACNKLITRHQHKADIYLDFLEREIQVRSKL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R  + + +GGGTP+ +     + ++  +  ++ ++ N EI+IE +P  +E++  +  
Sbjct: 98  FADRVATQVHWGGGTPTYLTEAQSSRLMQMLRDHFNIADNAEISIEMDPREIELSMLEHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NRIS+GVQ   ++  + + R  + +   A +  AR   F   + DLIY LP QT+
Sbjct: 158 RHIGFNRISMGVQDFNKEVQKAVNREQDENFVNALLVRARELGFQSTNLDLIYGLPFQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQ+ +    D LS++       + F    K  D  LP     +++   T     
Sbjct: 218 DGFMFTLQKVIELNPDRLSVFNYAHLP-SRFAGQAKIKDWQLPKPEAKLEILQKTIETLG 276

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +    E        + + N+  Y      D +G+G  A S +     +
Sbjct: 277 NAGYKFIGMDHFAKPDDELAIAQQKGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  +++   V  +G A+ +   ++ E      ++  L     ++    E     
Sbjct: 337 N----QKDLKAYYTAVDMHGIALHKGLAMTKEDCLRRDVIKQLICNFKLAYAPIEQQYHI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           N       D+     L   G ++  +   +  + +G  ++ ++ 
Sbjct: 393 NFKQYFAEDLVLLAPLAADGLLDIGEAQ-ITVSAKGRLLIRNIC 435


>gi|16752659|ref|NP_444924.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae AR39]
 gi|8163419|gb|AAF73661.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Chlamydophila pneumoniae AR39]
          Length = 394

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 112/386 (29%), Positives = 194/386 (50%), Gaps = 17/386 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPR 69
           M   G   L +Y+H PFC KKC YC F +   + +     +  + +   ++ +  +    
Sbjct: 20  MLMNGKAPLALYIHIPFCTKKCRYCSFYTIPYKSES-VSLYCNAVIQEGLRKLAPIQETH 78

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++FFGGGTPSL+ P ++  IL  +A +       EIT+EANP ++ V+  +  ++  
Sbjct: 79  FIETVFFGGGTPSLVSPLDLKRILKELAPHAR-----EITLEANPENLTVSYLRQLQETP 133

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           +NRIS+GVQ+ ++  L+ LGR H++S AI A+   +N  F  +S DLIY LP Q++  + 
Sbjct: 134 INRISVGVQTFDDSILQLLGRTHSSSAAITALQECQNHGFSNLSIDLIYGLPTQSLEIFL 193

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + G 
Sbjct: 194 SDLHQALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQGF 253

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+++++     + HNL YW    ++G+G  A   +    H        H   +L+ V
Sbjct: 254 QRYELASYAKPDYPAKHNLYYWTDRPFLGLGVSASQYL----HGERSKNYSHISHYLRAV 309

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
           RKN       E L  +++  E L + LRL EG  + ++       L     ++++ Q   
Sbjct: 310 RKNLPTQETSEILPKKERIKEALALRLRLLEGADLAEF----PSTLISMLTQDVKLQNLF 365

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
             V    L   ++G    D++   + 
Sbjct: 366 S-VHGQCLALNRQGRLFHDTIAEEIM 390


>gi|227538889|ref|ZP_03968938.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241398|gb|EEI91413.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 347

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 10/349 (2%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            + +   E++   Q    + ++S++FGGGTPS+++  +I   +D +++ + ++ + EIT+
Sbjct: 1   MMAAMRQELELRSQSGDTKKLTSLYFGGGTPSILDAGHIQSFIDAVSEYYDIAEDAEITL 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FP 169
           EANP  ++    Q  R   +NR S+G+QS  E+ L ++ R HNASEA AAI   ++  F 
Sbjct: 61  EANPDDLDHKKVQQLRHTDINRFSIGIQSFYEEDLSWMNRAHNASEADAAIKRVQDAGFE 120

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DLIY  P  T  +W   + + L + + H+S Y +T+E  T      K G     +E
Sbjct: 121 NITADLIYGYPLLTDQKWNANIDKLLEFEIPHISAYSMTVEPQTALDHFIKKGKSPAMNE 180

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
           + +   + +        G   YEISN +     + HN +YW+   YIGIGP AHS     
Sbjct: 181 SQSAAQFEILIDKLVNSGFEHYEISNFAKPDRYARHNSSYWKGDTYIGIGPSAHSF---- 236

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           +         +   ++K + +    V E E LS E + +E++M  LR   G+     E  
Sbjct: 237 NGDNRSWNIANNALYIKGISE-KTPVAEVEQLSFENKVNEYIMTSLRTMWGMDTAKIEEA 295

Query: 350 AGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G +   +     +    QG + R+Q      T +G  + D + + L +
Sbjct: 296 FGSDTLKQLTNTIQPFIAQGEV-RLQDGHYYLTAKGKLIADHIASELFL 343


>gi|330836550|ref|YP_004411191.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           coccoides DSM 17374]
 gi|329748453|gb|AEC01809.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           coccoides DSM 17374]
          Length = 400

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 115/403 (28%), Positives = 183/403 (45%), Gaps = 26/403 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQW 61
           LS++  +M       + +Y+H P+C  +C YC F S  R       Q+ + +  L E++ 
Sbjct: 5   LSSFSRDM------DISLYLHIPYCDTRCSYCAFYSLGRHDWFMGAQDVYARRLLEEIRT 58

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +    G R   SIF GGG P  +EP  +  IL     +       E+T+E NP S++   
Sbjct: 59  VTSWMG-RPFHSIFVGGGNPGCLEPDVLHSILKETTCHGM---PAELTVEMNPESLDERR 114

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNH----NASEAIAAIHLARNIFPRMSFDLIY 177
                     R+S+GVQSL   +L  LGRN            A+ L       ++FD+I 
Sbjct: 115 MDILAMH-ATRLSMGVQSLSPFTLSVLGRNSCKDRTLEGMEKALFLHGRAGLALNFDIIT 173

Query: 178 ALPKQTMTQWEMELQRALSYA--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            +P Q +     ++Q  LS     DH+SLY LT+E+GT   +    GD+    E+   D+
Sbjct: 174 CVPGQDVRSAVNDMQEILSTGHEADHISLYNLTVEEGTALAQRIDRGDVTPLDEDSQADI 233

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VA 294
                ++ +  G   YE+SN +  G ES+HNL YW    YIG+G GA       S R V 
Sbjct: 234 LQACWNVLAEKGYTHYEVSNFARPGHESIHNLCYWSGKQYIGLGSGASGTSLAPSGRTVR 293

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
            +       +++     G+A    E L + +  +E L+  +R   GI    +    G + 
Sbjct: 294 WTYPPDIHRYVRGASGTGYA---GEELGTGEIMEEILLTQMRTSVGIDKNAFAARTGLDF 350

Query: 355 DIECERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           D     ++ R  QG   +   S    T+RGM +LD+++ + A+
Sbjct: 351 DRIFSPSIARMEQGT-YKDSSSHFVVTERGMMILDAIVLDFAL 392


>gi|298708749|emb|CBJ30711.1| coproporphyrinogen III oxidase [Ectocarpus siliculosus]
          Length = 596

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 177/417 (42%), Gaps = 62/417 (14%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEM--------------- 59
            VYV+ PFC ++C YCDF   V   + G      + ++ + + E+               
Sbjct: 54  SVYVNLPFCRRRCFYCDFPIKVVGDRPGAAAAAAKPYVDNVVREIRATAAAAAIEAPKLP 113

Query: 60  --------QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
                     M        + ++FFGGGTPSL  P+ + L+++ +   + +++  EI+IE
Sbjct: 114 ARGGAGGDDTMEHSGRGGGVKTLFFGGGTPSLCPPELVGLLIETVRNCYGIAAGAEISIE 173

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPR 170
            +P + +    + +   G+ R+S+GVQS +   L   GR H+ ++   A+ L R      
Sbjct: 174 MDPGTFDEARLEAFLALGITRVSMGVQSFDAGLLEACGRAHSLADVYQAVELLRKAKVDN 233

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            S DL+  LPKQT+ QWE  L  A++    H+S+Y L +E GT F +    G+  LP + 
Sbjct: 234 FSIDLMSGLPKQTVEQWEHTLSEAIATGAAHISVYDLQVEAGTPFGRWFSPGEAPLPEDE 293

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
              D+Y     +    G   YEISN++  G +S HN  YW    ++  G GA S V    
Sbjct: 294 TCADMYRTASGVLGQAGYDHYEISNYARPGFQSRHNRAYWENVPFLAFGNGAASFVDGYR 353

Query: 291 HRVAISIEKH--------PESWLKMVRKNGHAVVE---------------------KEFL 321
                 + ++         E W K       A  E                     +E L
Sbjct: 354 FSRPRGLPEYGQWVGELEEEGWDKATGAPRRAACEEVLPGGGGMGDGAGAEESRPSREAL 413

Query: 322 SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSR 375
                  + +M+G RL+EG+ ++      G +     E       RQG++ R   +R
Sbjct: 414 -ERDALLDDVMLGFRLKEGLDLRVVASKYGHSAARRVEEGATEGMRQGWVVRDTAAR 469


>gi|291405795|ref|XP_002719153.1| PREDICTED: radical S-adenosyl methionine domain containing 1-like
           [Oryctolagus cuniculus]
          Length = 490

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 19/380 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++    V +    +   TE + + + +G R + S+FFGGG
Sbjct: 42  ALYVHWPYCEKRCSYCNFNKYLP-GGVEEVAVRRCLETEARTLLRFSGVRRVESVFFGGG 100

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   +  + E+T+EANP+S   +    +  AGVNR+S+G+QS
Sbjct: 101 TPSLASPHTVAAVLEAVAQATYLPVDSEVTLEANPTSAASSRLAAFGAAGVNRLSIGLQS 160

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L++  LR LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +L+  L   
Sbjct: 161 LDDAELRLLGRTHSASDALRTLAEARRLFPGRVSVDLMLGLPAQQVRPWLGQLRELLRRC 220

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+SLYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN + 
Sbjct: 221 DDHVSLYQLSLERGTALFAQVQQGALPAPDPELAAEMYQEGRAVLRDAGFRQYEVSNFAR 280

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHA 314
            GA S HN  YW+ G Y+G+GPGAH R       G  R A      P++W+K V + GH 
Sbjct: 281 NGALSTHNWTYWQCGQYLGVGPGAHGRFVPQGAGGHTREARIQTLEPDAWMKEVMQFGHG 340

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQ 365
             ++  L   +  +E L MGLR   GI+ + W+            G + +++  +     
Sbjct: 341 TRKRTPLGELELLEEVLAMGLRTDVGITHQHWQQFEPQLTLGAVFGASEEVKELQEQGL- 399

Query: 366 GFIERVQFSRLRCTQRGMTM 385
                +    LRC+  G+ +
Sbjct: 400 ---LLLDHRGLRCSWEGLAV 416


>gi|221201136|ref|ZP_03574176.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2M]
 gi|221206411|ref|ZP_03579424.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2]
 gi|221173720|gb|EEE06154.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2]
 gi|221178986|gb|EEE11393.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans CGD2M]
          Length = 463

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 87/418 (20%), Positives = 156/418 (37%), Gaps = 38/418 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N            ++     E+  
Sbjct: 42  DYVRAASD--PGASSSELSLYFHIPFCNTACFYCGCNRIATNNHRRARPYLDQLKREIAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L    R ++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QATLFDRSRPVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
            +     R  G NR+SLGVQ  +    R + R    +     +  AR   F  +S DLIY
Sbjct: 160 PSTLVHLRTIGFNRLSLGVQDFDPDVQRAINRIQPLAMTADVMAAARATDFHSISVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVAAFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRRIDDATLPPAETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLIGIGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTADDRLRRDVIAQLMCNLELPFSP 394

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
                   +     R LD    R  +R G +   +    R T    G  ++ ++    
Sbjct: 395 IEAAHGIRFADRFARELD--ALRPFERDGLLTIARD---RLTIHPPGRMVVRNIAMAF 447


>gi|281340024|gb|EFB15608.1| hypothetical protein PANDA_012970 [Ailuropoda melanoleuca]
          Length = 342

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 126/325 (38%), Positives = 190/325 (58%), Gaps = 6/325 (1%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN ++ R  V +       +TE Q + +L+G + + S+FFGGGTPSL 
Sbjct: 19  WPYCEKRCSYCNFNKYIPRG-VEEAAMRSCLVTEAQTLLRLSGVQRVESVFFGGGTPSLA 77

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +A +L+ + +   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL++  
Sbjct: 78  SPNTVAAVLEAVDQISHLPADSEVTLEANPTSASGSKLAAFGAAGVNRLSIGLQSLDDTE 137

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           LR LGR H+AS+A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L    DHLS
Sbjct: 138 LRLLGRTHSASDALQTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQTLLGCCDDHLS 197

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLT+E+GT  +   + G L  P   +  ++Y   +++    G   YE+SN +  GA S
Sbjct: 198 LYQLTLERGTALFTQVQRGTLPAPDPELTAEMYQEGRAVLREAGFRQYEVSNFARNGALS 257

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKV----GSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            HN  YW+ G Y+GIGPGAH R  +    G  R A      P++W+K V   GH+   + 
Sbjct: 258 THNWTYWQCGQYLGIGPGAHGRFVLQGAGGHTREARIQTLEPDNWMKEVMLFGHSTRRRV 317

Query: 320 FLSSEQQADEFLMMGLRLREGISVK 344
            L   +  +E L MGLR   GI+ +
Sbjct: 318 PLGQLELLEEVLAMGLRTDVGITHQ 342


>gi|285808468|gb|ADC35993.1| coproporphyrinogen III oxidase anaerobic [uncultured bacterium 148]
          Length = 409

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 112/412 (27%), Positives = 166/412 (40%), Gaps = 48/412 (11%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN----SHVRRYKVGQENFIQSFLTEMQWMRQLT------- 66
              +Y+H PFCV  CPYCDF     S  R      + ++ +   E++             
Sbjct: 11  PAALYIHVPFCVSLCPYCDFVVIAGSATRGPTNKVDRYLAALRRELELRADALDATFGLP 70

Query: 67  ---GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                 ++ S++ GGGTPS++  + IA +L+ +   + ++   E+T+EANP   E  +  
Sbjct: 71  GTAERPALESVYLGGGTPSIMPAEAIAALLERVRGRYGLADGAEVTLEANPGPDERGDPA 130

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
               AGVNRIS G QSL++  LR LGR H A     A+  AR   F  ++ DL+Y +P  
Sbjct: 131 ALLAAGVNRISFGAQSLDDTELRRLGRRHRARHVAEAVANAREAGFSSINVDLLYDIPDT 190

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIE---------------KGTLFYKMHKDGDLVLP 227
               W   L R L  A +H SLY L ++                 T   +  +DG     
Sbjct: 191 DHPTWMTTLDRVLEMAPEHCSLYALALDDPDAEGLTGPFGDHLPMTRGARRWRDGVRPGQ 250

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            E+ A   Y+       A G   YEISN +  G ES HNL YW    +  +GPGAH+   
Sbjct: 251 DEDRAAAQYHHAVVTLGAAGYRGYEISNWAQPGHESRHNLAYWMRRPHEALGPGAHAFDG 310

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD-- 345
                 A       + +L  V                 +A E L++ LRL  G+ +    
Sbjct: 311 HRRRWNAAR----LDGYLAAVESGALPPGGVAETDPADEAAEALILTLRLDSGVPLATAY 366

Query: 346 ---WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                   G  L  E          +      R+  T RG  + + +   L 
Sbjct: 367 EPPLADHFGWALAAE---------LLTVTDDDRVVLTTRGRLLSNELFQRLV 409


>gi|299530175|ref|ZP_07043601.1| coproporphyrinogen III oxidase [Comamonas testosteroni S44]
 gi|298721832|gb|EFI62763.1| coproporphyrinogen III oxidase [Comamonas testosteroni S44]
          Length = 460

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 147/412 (35%), Gaps = 32/412 (7%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+ A +   T  GS    L VYVH PFC   C YC  N  V ++      ++     E+
Sbjct: 36  DYILALKQRKTHSGSRALPLSVYVHVPFCESLCYYCACNKIVTKHHEKAAEYLDYLSREL 95

Query: 60  QWMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
               +  G    +S +  GGGTP+      +  ++  + +++ +    E +IE +P +V 
Sbjct: 96  AMHTEHCGKGQLVSQLHLGGGTPTFFSDAELQQLMVLMREHFKLDPAGEYSIEVDPRTVS 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +  +  G NR+S GVQ  +    + + R   A +  + +  AR   F  ++ DLIY
Sbjct: 156 NERLRALKDMGFNRLSFGVQDFDPAVQKAVHREQPAEQVFSLVAEARRLGFVSINVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   +   L +      D ++LY         F    +     LP     +++ +
Sbjct: 216 GLPRQTPESFARTLAQVNELRPDRIALYAYAHLPE-RFKPQRRIESADLPMGQDKLNMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
                    G     + + +           +   + N+  Y      D I +G  A  +
Sbjct: 275 GAIDAFMDGGYVYVGMDHFALPDDSLAIAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGK 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K  E +   V      V     LS +      ++M +  +  +  + 
Sbjct: 335 VGATYSQNV----KTLEEYYDAVDGGMLPVQRGLALSRDDLVRRAVIMSIMCQGSVLYEP 390

Query: 346 --------WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                   +       LD      +QR G +E       + T  G   +  V
Sbjct: 391 MEQAWLINFREYFAAELD--ALAEMQRNGLVELSAEG-FKVTGLGWFFVRGV 439


>gi|88861020|ref|ZP_01135655.1| coproporphyrinogen III oxidase [Pseudoalteromonas tunicata D2]
 gi|88816948|gb|EAR26768.1| coproporphyrinogen III oxidase [Pseudoalteromonas tunicata D2]
          Length = 456

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 155/395 (39%), Gaps = 23/395 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           + +    +  L +Y+H PFC + C YC  N  V R++   + ++     E+    +L   
Sbjct: 42  SALAQTNNKKLSLYIHIPFCHQLCYYCGCNKIVTRHQHKADLYLDYLEQEITAQAKLYQH 101

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +  +  GGGTP+ ++   +  +++ + +++   ++ +  IE +P S+  N      + 
Sbjct: 102 YEVEQLHLGGGTPTFLDQAQMTRLINMLNQHFQFKADAQKGIEIDPRSLAENMLSVLFQL 161

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQW 187
           G NR+S G+Q   +   + + R   A       I   +  F  ++ D+IY LP QT   +
Sbjct: 162 GFNRVSFGIQDFNDDVQKAVNREQCAENVANLVIEARQLGFKSVNADMIYGLPLQTPESF 221

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              + + +S + D +S++         F    K  D  LP     + ++  T +  +A G
Sbjct: 222 AATIDQLISLSPDRVSVFNYAHLPD-RFAAQRKIKDQDLPCATDKLAMFKNTLAQMTAAG 280

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           + L + N+  Y      D +G+G  + S+V         
Sbjct: 281 YVLIGMDHFAKKDDSLAIAQQQGLLHRNFQGYTTHGDCDLLGLGVSSISQVGNS----IF 336

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              K  + + + V  +G AV +   L+ +      ++  L     + +   E   G N  
Sbjct: 337 QNPKELKGYYQAVETSGIAVCKGLTLNDDDCLRADVIRQLICHFTLDIPTIERQYGINFK 396

Query: 356 IECERNLQRQGFIER-----VQFSRLRCTQRGMTM 385
           +     L +   +       V+   +  T +G   
Sbjct: 397 VYFASALVQLQTLAADNMLSVEPKTITVTAKGRLF 431


>gi|217077251|ref|YP_002334969.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho africanus TCF52B]
 gi|217037106|gb|ACJ75628.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermosipho africanus TCF52B]
          Length = 372

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 17/345 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N+L VY+H PFC KKC YCDF S+    +   EN+I +   E++        R I +++ 
Sbjct: 10  NTLSVYIHIPFCKKKCYYCDFVSY---EEGSVENYINALSKEIELYGDYLK-RGIRTLYI 65

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS I    I  ++  + K   +    E TIE NP S +    Q Y++ GV+R+S+G
Sbjct: 66  GGGTPSYINEHYIEQLVKKLEKYLILE---EFTIEVNPDSFDRQKAQFYKEIGVSRLSIG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS + + L+  GR+H++++A+ A ++AR  F  ++ D I  LP ++ +  E  ++    
Sbjct: 123 IQSFDNEVLKKAGRSHDSAQALKAYNVAREYFENVNVDFIIGLPGESWSSIEEIVKFIRE 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               H+S+Y L I +GT+    +K           + + Y +      + G   YEISN 
Sbjct: 183 NHPPHISVYLLEIHEGTILSNFYKK------IPEESYNRYEVLLDFLKSEGYERYEISNF 236

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +     S HNL YW   DYIG+G  +   +    +          E++  M++ +     
Sbjct: 237 ALDKNYSKHNLVYWANLDYIGLGLSSGGHIGNLRYNNVSDF----ETYYSMLKHDKFPRS 292

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            +   + E++  E + M LR + GI  K   +L G    IE  + 
Sbjct: 293 YENENTLEREVLESIFMMLRTKWGIDRKLLPILPGFEKVIELLKK 337


>gi|320107410|ref|YP_004183000.1| oxygen-independent coproporphyrinogen III oxidase [Terriglobus
           saanensis SP1PR4]
 gi|319925931|gb|ADV83006.1| oxygen-independent coproporphyrinogen III oxidase [Terriglobus
           saanensis SP1PR4]
          Length = 383

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 108/391 (27%), Positives = 176/391 (45%), Gaps = 25/391 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------S 70
           +SLGVY+  PFC  KC +C+F S     +   + ++     E++  RQ+   R      +
Sbjct: 3   DSLGVYLSVPFCKAKCSFCNFASDAFAPE-RMDGYVARLCAEIRSARQIAAERGVVVPQT 61

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + S++FGGGTPSL+       I   +   + V +N EIT+E  P  +   + Q   + GV
Sbjct: 62  VDSVYFGGGTPSLLGVDKFEEIFAALRGEFDVVTNAEITMECAPGQIAETSLQAAMRLGV 121

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +R+SLGVQS  ++    +GR H   +    I   R++   + FDLI  LP QT   W   
Sbjct: 122 SRVSLGVQSFVDRESAAVGRLHTGIQCENEIARLRSLGLDVGFDLICGLPHQTCESWRES 181

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM-----HKDGDLVLPSENVAVDLYNLTQSITSA 245
           L+RA++    H+S+Y L +++ +   +       + G  ++P +    ++Y     + + 
Sbjct: 182 LRRAVATGAHHVSVYMLEVDEDSRLGRELIGPGVRYGAGMVPDDGAVAEMYLEACDVLAE 241

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR-VAISIEKHPESW 304
            GL  YEISN +    +S HN  YW    Y+G G  AHS +     R    S     +++
Sbjct: 242 GGLAQYEISNFAREDHQSRHNRKYWERAPYLGFGLDAHSMLPDEQGRAARFSNGDELDAY 301

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           L          V  E +   +  +E + +GLRL EG+       + G   ++        
Sbjct: 302 LSEAD-----PVSVERVEDAEAFEEKVFLGLRLNEGVEAALLADVHGAVDEMV------- 349

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           QG +      R   T RG  +  SV   L  
Sbjct: 350 QGGLMWSANGRFGLTARGRVVSSSVFGELLA 380


>gi|66813964|ref|XP_641161.1| hypothetical protein DDB_G0280411 [Dictyostelium discoideum AX4]
 gi|74855863|sp|Q54VE8|RSAD1_DICDI RecName: Full=Radical S-adenosyl methionine domain-containing
           protein 1, mitochondrial; AltName:
           Full=Oxygen-independent coproporphyrinogen-III
           oxidase-like protein RSAD1; Flags: Precursor
 gi|60469189|gb|EAL67184.1| hypothetical protein DDB_G0280411 [Dictyostelium discoideum AX4]
          Length = 446

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 145/422 (34%), Positives = 223/422 (52%), Gaps = 46/422 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ----------LTG 67
            + ++V+WP+C K CPYC+FN +    KV  E   +S   E++   +             
Sbjct: 24  PISLFVYWPYCSKICPYCNFNKYRDSDKVDHERMSKSLSRELESFVKNIYLNSNENSFIR 83

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS---SNVEITIEANPSSVE-VNNFQ 123
            R I+SI+FGGGTPSL +       ++ + K +  S    ++EIT+E NP   +  N  +
Sbjct: 84  ERPITSIYFGGGTPSLAKISTFVETIETMKKLFPSSLSIEDIEITLEVNPDQKDLKNLLK 143

Query: 124 GYRKA-GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP-K 181
            ++K  GVNR+SLGVQSL ++ L FLGR HN  +A  +I +AR++F  ++FDLIY+    
Sbjct: 144 DFKKYVGVNRVSLGVQSLVDKDLHFLGRTHNRIQAEESIKIARDLFDHVTFDLIYSRTID 203

Query: 182 QTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMH----KDGDLVLPSENVAVDL 235
           QT+ QW  EL+ AL+      H+SLY LT E+GT FY+          ++ P +  + DL
Sbjct: 204 QTLEQWRNELRYALNLADGNGHVSLYTLTFEQGTSFYRRLSSKGNKFKIIPPDDQKSSDL 263

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAES-LHNLNYWRYGDYIGIGPGAHSRVKVGSH--- 291
           Y+LT     A G   YEIS+ +    +   HNLNYWR GD+IGIGPGA SR+   ++   
Sbjct: 264 YDLTVCEAEAMGFQQYEISSFASSHNQKGKHNLNYWRSGDFIGIGPGASSRLTTLNNNNN 323

Query: 292 ------RVAISIEKHPESWLKMVRKNG---HAVVEKEF-----LSSEQQADEFLMMGLRL 337
                 R +     HP+ W++ +       +A +E EF     L++ + A+E L+ GLR 
Sbjct: 324 NNNQISRYSFKNILHPKEWMEKLNSKEILCNAFIEDEFNPTIPLTNFEVAEEMLLNGLRT 383

Query: 338 REGISVKDWE-MLAGRNLDIEC----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
            EG+ +  +     G   D          LQ QGF+  ++ + L+ T  G  +LD++I  
Sbjct: 384 IEGVQLSTFTFQTNGLTFDQFLNMKQVEILQEQGFL-ILEPTCLKLTGNGRKLLDTIIPK 442

Query: 393 LA 394
           + 
Sbjct: 443 IL 444


>gi|167626131|ref|YP_001676425.1| coproporphyrinogen III oxidase [Shewanella halifaxensis HAW-EB4]
 gi|167356153|gb|ABZ78766.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           halifaxensis HAW-EB4]
          Length = 446

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 163/401 (40%), Gaps = 25/401 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H PFC K C YC  N  + R+    + +I+    E+     L   
Sbjct: 32  TSIKNSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHHHKADQYIEYLAAEIVKRAPLFKD 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P+ I  +   +  N+ V+   E +IE +P  +E++     ++A
Sbjct: 92  YLVTQIHWGGGTPTFLTPEQILTLSALVKANFNVAEVGEYSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 152 GFNRISIGVQDFNKKVQVAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETF 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L    D LS++       + F    K  D  L S    +D+ + T    +  G
Sbjct: 212 AETMQRVLDLNPDRLSVFNYAHLP-SRFAAQRKIKDEDLASPQQKLDMLHQTIETLTGAG 270

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 271 YQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 328

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +K    + + +  NGHA+ +   L+ + +    ++  L     + +   E     N +
Sbjct: 329 --QKDIRPYFESIDANGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAQIEEKLNINFE 386

Query: 356 IECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L           ++     ++  +  G  ++ ++ 
Sbjct: 387 EYFAEDLKLLQTFIDDKLVDITD-RKITISPTGRLLIRNIC 426


>gi|119356450|ref|YP_911094.1| coproporphyrinogen III oxidase [Chlorobium phaeobacteroides DSM
           266]
 gi|119353799|gb|ABL64670.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 472

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 81/393 (20%), Positives = 168/393 (42%), Gaps = 21/393 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           S  + +Y+H PFC   C +C  N+H  +    +  ++ + L E Q       G  ++  +
Sbjct: 49  STGISLYIHIPFCENYCYFCGCNAHRTQDHSFEAPYLDALLKEWQMYLDVFPGTLNVKEM 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DG+ K+     +   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFFSPENLIKLVDGLYKHVNTMDDYIFSFETNPRSTSREHLEALYSVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 169 FGIQDFDPIVQQEINRPQSFELVREKVELAREIGFTSLNFDLVYGLPKQTLATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +V  +LY+  +++  + G H   +
Sbjct: 229 VMELKPDRLAFYAYG-HNPHMYEGQRKFKESDLPVGDVKQELYDKGRAMLESIGYHEIGM 287

Query: 254 SNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +  G    E+  N     N+  Y +      + +G  + S     +       E+H 
Sbjct: 288 DHFAIEGDALYEAAKNGTLHRNFMGYTENTTQMMLALGASSIS----DTWYAFAQNERHD 343

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECER 360
           ++++K V +    ++    L+ E       ++ L  ++  S +D ++     ++      
Sbjct: 344 DAYIKAVNEGRFPLLRGHLLTDEDLVLRRHILNLMCKQETSWEDPKLYCDELDIARYRLE 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +++  G +  ++   +R T  G+  L ++    
Sbjct: 404 DMESDGMVVLLEHG-VRVTDVGIPFLRNICMAF 435


>gi|47215409|emb|CAG01106.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 412

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 134/412 (32%), Positives = 231/412 (56%), Gaps = 46/412 (11%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C+++C YC+FN ++ R +  +    +    E + + +L+    I+S+FFGGGTPSL 
Sbjct: 3   WPYCLRRCTYCNFNKYISR-ENNESIMAECLQKEAESLLKLSQVSCITSVFFGGGTPSLA 61

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  IA +L+ ++++ +++ + E+T+E NP+ V  +  + Y++AGVNR S+GVQSL++  
Sbjct: 62  HPSTIAALLETVSRHASLTGDAEVTLEVNPTPVGTSKLEDYQQAGVNRFSIGVQSLQDDD 121

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ LGR+H + +A+  +  AR + P R+S D+++  PKQ++  WE EL   L    DH+S
Sbjct: 122 LKLLGRDHTSRQALQTLDKARRLCPGRVSVDVLFGRPKQSVESWEEELSELLGVCDDHVS 181

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQLT+E+GT  ++  + G++ LP+E V  ++Y   ++I    G   YE+SN +   A S
Sbjct: 182 LYQLTLERGTQLFRQVEGGEVTLPAEEVTAEMYERARAILHRRGFLQYEVSNFARNNAVS 241

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            HN++YW+   YIG+GPGAH R     + G+ R A +    P++W++ V++ GH    + 
Sbjct: 242 HHNMSYWQGRQYIGVGPGAHGRFVLGAQGGAVREARTQTLEPDAWIREVQQRGHGTRRRI 301

Query: 320 FLSSEQQADEFLMMGLRLREGIS---------------------------VKDWEML--- 349
            L   +  +E L MG+R  EGIS                           ++ W +    
Sbjct: 302 QLDHLELLEEVLAMGMRTTEGISHEVSYSLKVKVIFRSQREKSQRFCGYFLQHWALFSPQ 361

Query: 350 ------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                  G ++D++   +  R G +  +    LRC++ G+ +LDS++  L V
Sbjct: 362 LGLRDVFGASVDVQ---DYLRSGRL-ILDPRGLRCSREGLALLDSMLPALLV 409


>gi|53802626|ref|YP_112654.1| coproporphyrinogen III oxidase [Methylococcus capsulatus str. Bath]
 gi|53756387|gb|AAU90678.1| oxygen-independent coproporphyrinogen III oxidase [Methylococcus
           capsulatus str. Bath]
          Length = 465

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 155/412 (37%), Gaps = 27/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y             + L +Y H PFC   C YC  N  V   +     +I     E++ 
Sbjct: 44  RYEEWLHRRAAEANPSPLSLYFHIPFCQTVCFYCACNKIVTANREHAGKYIDYLEKEIEL 103

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +  GP R +  + +GGGTP+ +    +  +++   +++ ++   E +IE +P  V+  
Sbjct: 104 QARHLGPHREVRQLHWGGGTPTFLNHAQMRRLMEATREHFELAEG-EYSIEIDPRKVDAA 162

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYAL 179
                R+ G NR+SLGVQ  +    + + R  +  E +  +  AR   F  +S DLIY L
Sbjct: 163 TIALLREIGFNRMSLGVQDFDPAVQKAVNRIQSEEETLRVLTAARAEGFCSVSIDLIYGL 222

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PKQ+++ +   L R L+   D +SLY        LF    +  D  LPS +  +++    
Sbjct: 223 PKQSVSGFRHTLDRILAADPDRISLYNYAHLPH-LFKPQRQIRDEDLPSADTKLEILQDA 281

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
            +  +  G     + + +           E     N+  Y      D + +G  A  +V 
Sbjct: 282 VAHLTGAGYVYIGMDHFAKADNELNLAQREGRLQRNFQGYSTHADCDMVALGVTAIGKVG 341

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      +  E +   + +    V+       +      ++  L  +  +      
Sbjct: 342 PTYSQNF----RTLEDYYARLDQGVLPVMRGLECDDDDLLRRAVIQALMCQFELDFVRLG 397

Query: 348 MLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G +        L         G +E +   RL  T +G  ++ ++    
Sbjct: 398 RQHGVDFPRYFAAELDDLEPMAADGLLE-LGPDRLTVTPKGRFLIRNIAMAF 448


>gi|163803812|ref|ZP_02197664.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
 gi|159172392|gb|EDP57266.1| coproporphyrinogen III oxidase [Vibrio sp. AND4]
          Length = 289

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 10/291 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +EANP ++E   F GYRKAGV RIS+GVQS E+Q L  LGR H   EA+ A  LA  I  
Sbjct: 1   MEANPGTIEAERFAGYRKAGVTRISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGL 60

Query: 170 R-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
              + DL++ LP Q++ Q   +L +A+  A  HLS YQLTIE  T+F+         LP 
Sbjct: 61  NSFNLDLMHGLPDQSIEQALTDLDKAIELAPPHLSWYQLTIEPNTMFHYKPPT----LPD 116

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           ++   D++       +A G   YEIS +S  G +  HNLNYWR+GDY+GIG G+H ++  
Sbjct: 117 DDDLWDIFEQGHEKLAAAGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSF 176

Query: 289 GSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDW 346
              R+  + + KHP  +L   +      ++ E L + E +  EF M   RL E    +D+
Sbjct: 177 ADGRIVRTTKVKHPRGYLMAYQNMVKPYLDSEQLVADEDRPFEFFMNRFRLMEACPKQDY 236

Query: 347 EMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               G  L+   E        G++   Q +  + T++G   L+ ++     
Sbjct: 237 IDTTGLPLNSIQETIDWALEMGYLSETQ-THWQITEKGKLFLNDLLEAFMA 286


>gi|89898396|ref|YP_515506.1| coproporphyrinogen III oxidase [Chlamydophila felis Fe/C-56]
 gi|89331768|dbj|BAE81361.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           felis Fe/C-56]
          Length = 375

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 17/386 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPR 69
           M   G   L +Y+H+PFC KKC YC+F +     +     +  + L   +  +  +T   
Sbjct: 1   MLMNGKTPLALYIHFPFCSKKCHYCNFYTIPYNPES-VGLYCNAILQEGLHKLSTITDSY 59

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++F GGGTPSLI P ++  I+  +A +       EIT+EANP  +  +  +   +  
Sbjct: 60  FIDTVFLGGGTPSLIPPHHLHNIIKILAPHAQ-----EITLEANPEDLSESYLRDLTQTP 114

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           +NRIS+GVQ+  +  L+ +GR H++S +I A+       +  +S DLIY LP Q+++ + 
Sbjct: 115 INRISIGVQTFHDPLLKAIGRIHSSSASIDAVQRCHEHEYHNISIDLIYGLPTQSLSDFI 174

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +ALS  + HLSLY LT++  T FYK  +  +  +  +++   +    + + S+HG 
Sbjct: 175 ADLHQALSLPITHLSLYNLTLDPHTSFYKHRRILERSIADDDILAAMSLSAEELLSSHGF 234

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+++++   A+S HNL YW    ++G+G  A         ++          +L+ +
Sbjct: 235 SRYELASYAKFQAQSKHNLYYWTDKPFLGLGVSASQYFN----KIRSKNLSRISHYLRAL 290

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
           RKN       E L  E++  E L + LRL  G   KD+       L        Q Q   
Sbjct: 291 RKNLPLQEFTECLPEEERIKEALALRLRLTNGARWKDFPA----PLMQALVSLPQIQELF 346

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++     L   ++G    D++   + 
Sbjct: 347 DQND-EFLFLNKQGRLFHDTIAEEIM 371


>gi|253996086|ref|YP_003048150.1| coproporphyrinogen III oxidase [Methylotenera mobilis JLW8]
 gi|253982765|gb|ACT47623.1| oxygen-independent coproporphyrinogen III oxidase [Methylotenera
           mobilis JLW8]
          Length = 482

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 80/407 (19%), Positives = 164/407 (40%), Gaps = 26/407 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW- 61
           Y         G  +  L +YVH PFC   C +C  N  V ++      +++    E+   
Sbjct: 61  YKQTLAQRRIGGLTLPLSIYVHIPFCESLCFFCACNKIVTKHHERSAEYLRYLSREIDLH 120

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  L   ++IS +  GGG+P+    + ++ ++  I +++ ++ N E +IE +P +V    
Sbjct: 121 VEHLGAGQTISQLHLGGGSPTFFSDEELSELMAMIRRSFVLAPNGEYSIEVDPRTVNEQR 180

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                  G NR+S GVQ  + +  + + R   A +  + +  AR + F  ++ DLIY LP
Sbjct: 181 LAHLASLGFNRLSFGVQDFDPEVQKAVHRIQPAEQVFSLVEAARRLKFDSVNADLIYGLP 240

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQ+   +   L + +    + ++LY         F    +     LP+ +  + + +   
Sbjct: 241 KQSPESFSKTLSQIVELRPERIALYAYAHLPE-RFKPQRRIDTYELPAASAKIAMLSNAI 299

Query: 241 SITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
           +     G     + + +           +   + N+  Y      D I +G  A  RV  
Sbjct: 300 ATFLNAGYVYVGMDHFALPTDALAIAKRQGRLHRNFQGYSTQPDCDLISLGVSAIGRVGA 359

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              + A    K  E +   + +    +V    L+ +      ++M +  +  +  +  E+
Sbjct: 360 TYSQNA----KTLEEYYDYLNQGRFPIVHGLALTRDDLVRRAVIMAIMCQGELQYEAIEL 415

Query: 349 LAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               N       ++E  + L++ G I   + S L+ T+ G   + +V
Sbjct: 416 AYMINFKQYFAAELEALKELEKTGMITLEENS-LQVTEFGWFFVRAV 461


>gi|170724423|ref|YP_001758449.1| coproporphyrinogen III oxidase [Shewanella woodyi ATCC 51908]
 gi|169809770|gb|ACA84354.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
          Length = 446

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 164/401 (40%), Gaps = 25/401 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L   
Sbjct: 32  TSIANSKSDKLSLYLHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKN 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P  I  +   I +++ V+   E +IE +P  +E++     ++A
Sbjct: 92  YLVTQIHWGGGTPTFLSPDQILKLSSLIKEHFNVADKGEYSIEVDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 152 GFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETF 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L    D LS++         F    K  D  L S    +D+ + T    +  G
Sbjct: 212 AETMQRVLDLDPDRLSVFNYAHLPA-RFAAQRKIKDEDLASPQQKLDMLHQTIETLTGAG 270

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 271 YQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 328

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +K    + + V K GHA+ +   L+ + +    ++  L     + +   +   G N +
Sbjct: 329 --QKDIRPYYESVDKLGHALWKGCSLNRDDEIRRVVIKQLICHFDLDMAQIDEKLGINFE 386

Query: 356 IECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L           ++     ++  +  G  ++ ++ 
Sbjct: 387 EYFSEDLKLLQTFIDDKLVDITD-RKITISPTGRLLIRNIC 426


>gi|15834942|ref|NP_296701.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270285113|ref|ZP_06194507.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270289134|ref|ZP_06195436.1| coproporphyrinogen III oxidase [Chlamydia muridarum Weiss]
 gi|301336508|ref|ZP_07224710.1| coproporphyrinogen III oxidase [Chlamydia muridarum MopnTet14]
 gi|8163196|gb|AAF73546.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Chlamydia muridarum Nigg]
          Length = 376

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 183/383 (47%), Gaps = 18/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + ++ +  + ++ + E ++ +  L     I +
Sbjct: 3   GKTPLALYIHVPFCSKKCHYCSFYTIPYKEELVRS-YCEAVIKEGLRKLAPLRCHYYIDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P  I  IL  +  +    S  E+T+EANP ++     +   +  VNRI
Sbjct: 62  VFFGGGTPSLVPPSLIQDILTTLEAH----SATEVTLEANPENLSQEYIRDLSQTAVNRI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+  +  L+ LGR H++S+AI    L     F  +S DLIY LP Q+++ +  +L 
Sbjct: 118 SIGIQTFNDPLLKLLGRTHSSSKAIETFLLCSQYGFSNLSADLIYGLPTQSISDFITDLH 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++  + H+S+Y LT++  T FYK  K     +  E+   ++    + +   HG + YE
Sbjct: 178 QAITLPIQHISVYNLTVDPHTSFYKHRKSILPSIADEDSLAEMALKAEELLENHGFNRYE 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   AES HN  YW    ++G+G  A   +     +    I      +L+    + 
Sbjct: 238 LASYAKNHAESKHNTYYWTDKPFLGLGVSASQYLNGIRSKNFSRIS----HYLRAAHHHQ 293

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIECERNLQRQGFIERV 371
                 E L   ++  E L + LRL + I    + E L    L     R L        +
Sbjct: 294 PTAESMEELPPCERIKEALALRLRLCDPIPFCMFPEELVNEILMNPSIRPLFA------I 347

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
                   ++G    DS+   + 
Sbjct: 348 NAQTFSLNKQGRLFHDSIAEEIM 370


>gi|56478365|ref|YP_159954.1| coproporphyrinogen III oxidase [Aromatoleum aromaticum EbN1]
 gi|56314408|emb|CAI09053.1| Oxygen-independent coproporphyrinogen III oxidase [Aromatoleum
           aromaticum EbN1]
          Length = 475

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 153/405 (37%), Gaps = 30/405 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-L 65
                 G  S  L +Y H PFC   C YC  N  + +       +++    E+    + L
Sbjct: 58  LAQRAVGGVSKPLSLYFHIPFCNTICYYCACNKIITKDHARSAKYLKYLDKEIGMQAEAL 117

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G   ++ +  GGGTP+ +    +  ++D +   +T+  N E +IE +P  V+    +  
Sbjct: 118 GGSHQVTQLHLGGGTPTFLSHDELRQLMDSVRSRFTLVPNGEYSIEVDPRKVDFETVKLL 177

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
              G NR+S+GVQ   E     + R  +  E    I  AR   F  +S DLIY LPKQ +
Sbjct: 178 ADLGFNRMSVGVQDFNEDVQVAVNRVQSFDETKLVIDSARATGFKSISLDLIYGLPKQNI 237

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L++ L+ + D +SLY      G LF    +   + +P+ +  + +  L     +
Sbjct: 238 ISFNRTLEQVLALSPDRVSLYSYAHLPG-LFKPQRRITVVDMPTSDTKLQILQLAIRRLT 296

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           +   + N+  Y      D +  G  A  ++      
Sbjct: 297 EAGYVYIGMDHFAKPDDELTVAQRQGRLHRNFQGYSTQAECDLLAFGVSAIGKIGP---- 352

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK-------- 344
           V     K  + +   + ++   V+    L+++      ++  L     +S+         
Sbjct: 353 VYSQNFKSLDEYYDALDRDELPVLRGIELTADDLLRRSIIQALMCHFELSIDSIEIAHLI 412

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +       L  +  R ++  G +E      +     G  ++  +
Sbjct: 413 QFNEYFAEEL--QDLRAMEEAGLVEVTDKW-ISVMPAGRLLVRGI 454


>gi|300770417|ref|ZP_07080296.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762893|gb|EFK59710.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 347

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 10/349 (2%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            + +   E++   Q    + ++S++FGGGTPS+++  +I   +D +++ + ++ + EIT+
Sbjct: 1   MMAAMRQELELRSQSGDTKKLTSLYFGGGTPSILDAGHIQSFIDAVSEYYDIAEDAEITL 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FP 169
           EANP  ++    Q  R   +NR S+G+QS  E+ L ++ R HNASEA AAI   ++  F 
Sbjct: 61  EANPDDLDHKKVQQLRHTDINRFSIGIQSFYEEDLSWMNRAHNASEADAAIKRVQDAGFE 120

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DLIY  P  T  +W   + + L + + H+S Y +T+E  T      K G     +E
Sbjct: 121 NITADLIYGYPLLTDQKWNANINKLLEFEIPHISAYSMTVEPQTALDHFIKKGKSPAMNE 180

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
           + +   + +        G   YEISN +     + HN +YW+   YIGIGP AHS     
Sbjct: 181 SQSAAQFEILIDKLVNSGFEHYEISNFAKPDRYARHNSSYWKGDTYIGIGPSAHSF---- 236

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           +         +   ++K + +    V E E LS E + +E++M  LR   G+     E  
Sbjct: 237 NGDNRSWNIANNALYIKGISE-KTPVAEVEQLSFENKVNEYIMTSLRTMWGMDTAKIEEA 295

Query: 350 AGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G +   +     +    QG + R+Q      T +G  + D + + L +
Sbjct: 296 FGSDTLNQLTNTIQPFIAQGEV-RLQDGHYYLTAKGKLIADHIASELFL 343


>gi|209693845|ref|YP_002261773.1| coproporphyrinogen III oxidase [Aliivibrio salmonicida LFI1238]
 gi|208007796|emb|CAQ77918.1| oxygen-independent coproporphyrinogen III oxidase [Aliivibrio
           salmonicida LFI1238]
          Length = 457

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 160/405 (39%), Gaps = 25/405 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++   T      L +Y+H PFC K C +C  N  + R+    + ++ S   E++    
Sbjct: 39  AEFDMACTQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R ++ + FGGGTP+ +       +++ +   +   +  EI+IE +P  +E++    
Sbjct: 99  LFTDRKVTQLHFGGGTPTFLTKIQFTRLMNLLRGEFHFEAGAEISIEVDPREIELDMLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++    + R+ +    I+ +  A+   F   + DLIY LPKQ+
Sbjct: 159 LRDEGFNRLSIGVQDFNKEVQLLVNRDQDEDFIISMVQRAKELGFRSTNLDLIYGLPKQS 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                + ++R L      LS++       TLF    K  D  LP+    + +   T    
Sbjct: 219 AESLAITIKRVLEMEPGRLSVFNYAHMP-TLFAAQRKIKDADLPAPAEKLVMLQDTIETL 277

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           +  G     + + +           + + + N+  Y      D +G+G  A S +     
Sbjct: 278 TGAGYQFIGMDHFALPDDELAVAQRDGILHRNFQGYTTQGECDLLGMGVSAISMIGDSYA 337

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K  + +   V    HA+     L  +      ++  L     +  K  E+   
Sbjct: 338 QN----KKDLKEYYAQVDDKRHALWRGVALDQDDLIRREVIKQLICNFTLDTKAIEVEFN 393

Query: 352 RNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +       D +  +       +   +  R+    RG  ++ ++ 
Sbjct: 394 LDFATYFAEDFKLLQTFVDDELVSLHE-GRIDVELRGRLLIRNIC 437


>gi|319956390|ref|YP_004167653.1| oxygen-independent coproporphyrinogen iii oxidase [Nitratifractor
           salsuginis DSM 16511]
 gi|319418794|gb|ADV45904.1| oxygen-independent coproporphyrinogen III oxidase [Nitratifractor
           salsuginis DSM 16511]
          Length = 350

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 175/379 (46%), Gaps = 45/379 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
           +Y+H P+C  KC YC FNS+  R+    + ++++   ++  +  R    P SI ++F GG
Sbjct: 3   LYIHIPYCDSKCHYCSFNSYTGRFDTRPD-YMKALHRQLLFELERFEATPGSIETLFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + P+  A + + +     ++S  E+  EANP+S      +G +  G+NRIS GVQ
Sbjct: 62  GTPSTVPPELYAPLFETLKPY--LASEAELNCEANPNSASDTWLKGMKALGINRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +   L+ LGR H   +AI A+  A +I F R+S DLIY            +L  A   
Sbjct: 120 SFDPDKLKRLGRAHTPRQAIEAVERAADIGFKRLSLDLIYNCAGDDRELLNRDLDIASDL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y+LTIE+GT F +                    + ++I    GL  YEISN  
Sbjct: 180 PVGHLSAYELTIEEGTPFAQTPDVRQ------ENVALARWMARAI-EERGLPQYEISNF- 231

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNL YW+  DYIG+G GA    +   +    +++++  + L            
Sbjct: 232 --GDPCRHNLGYWQLKDYIGLGAGAVGFRQDRRYYPPTALDRYLANPLSH---------R 280

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E LS+E    E L +GLR R G+             + E  R L R+G +         
Sbjct: 281 TEILSAEDLKTERLFLGLRSRLGVDEAWLS-----PSERERARLLVREGKL--------- 326

Query: 378 CTQRG------MTMLDSVI 390
            T+ G      + + D ++
Sbjct: 327 LTRPGGYRNPDLFLADELV 345


>gi|281420803|ref|ZP_06251802.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella copri DSM 18205]
 gi|281405095|gb|EFB35775.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella copri DSM 18205]
          Length = 339

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 100/337 (29%), Positives = 172/337 (51%), Gaps = 10/337 (2%)

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L    +I +I+ GGGTPS +   ++  I   I KN+T++ N+EIT+E NP  V  +  
Sbjct: 8   AALGSNETIETIYLGGGTPSQLNGSHLNQIFSAIRKNYTLAENMEITMECNPDDVTGDFC 67

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           +  ++  +NRIS+G Q+   + LRFL R HNA E   A+   RNI    +S DL++  P+
Sbjct: 68  ETLKQLPINRISMGAQTFCNERLRFLHRRHNAGEVEEAVTRLRNIGIRNISIDLMFGFPE 127

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++++QW  +++ A+   V+H+S Y L  E+GT  Y M K G +    E  +  +Y     
Sbjct: 128 ESLSQWMSDIRHAIQLDVEHISAYSLMYEEGTPLYHMLKQGKISEIDEETSRKMYETLID 187

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
             +  G   YEISN +  G  S HN +YW    YIGIG  AHS     + +      ++ 
Sbjct: 188 QLTGAGYEHYEISNFARPGFRSRHNSSYWHEVPYIGIGAAAHSY----NRKQRSWNIENI 243

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           +++++ +        E E L    + ++ +   LR  +GI++   E   G+ L     + 
Sbjct: 244 QTYIRSIGDGILP-SESEQLDIFTRYNDLITTALRTSDGINLMKMEQEFGKELADRLLQE 302

Query: 362 LQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            Q    +G + +++  RL  T+ G+ + D V+++  +
Sbjct: 303 AQSHISRGLM-KIKNGRLSLTREGLYISDDVMSDFMI 338


>gi|218244993|ref|YP_002370364.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8801]
 gi|257058017|ref|YP_003135905.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8802]
 gi|218165471|gb|ACK64208.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8801]
 gi|256588183|gb|ACU99069.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 8802]
          Length = 465

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 156/404 (38%), Gaps = 32/404 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
                 + +Y H PFC   C +C  N+ + + K     ++     ++     L  P R +
Sbjct: 51  NHKKTPISLYCHIPFCETACYFCGCNTIITKNKKVAPTYLDYLTKDISQTAALISPQRKV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + I +GGGTP+ +    I  + + +  ++ +    EI+IE NP  ++ N     +  G N
Sbjct: 111 NQIHWGGGTPNYLNQSQIEQLFNHLVSHFNIEQRAEISIEVNPRYIDKNYIFFLKSLGFN 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+Q    Q    + R    S     +   R+  F   + DLIY LP QT+  ++  
Sbjct: 171 RISFGIQDFNPQVQEAINRIQPESMLFNVMGWMRDAGFDGANVDLIYGLPFQTLETFKET 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ +    D ++L+           +     +  LP     + +  +T    +++G   
Sbjct: 231 VKKTIQLNPDRIALFNFAYMPWLKPAQK-NISESDLPKAAEKLAILQMTIEELNSNGYVY 289

Query: 251 YEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D    G  + S +    H V +  
Sbjct: 290 IGMDHFAKPDDELAIAQQQGKLHR-NFQGYTTKPESDLFAFGITSISML----HDVYVQN 344

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  + +   +      + +   L  +      ++M L  +  ++   +E     + D++
Sbjct: 345 HKGLKGYYNALDAGKLPIEKGVSLHRDDIIRRAIIMELMCQFELNKDHFEEKYNLHFDLD 404

Query: 358 C----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                       + L+  G + ++   R+  T RG  ++ +V++
Sbjct: 405 FDQYFAKELVELQPLEADGLV-KLYSDRITVTPRGRLLIRNVVS 447


>gi|33241725|ref|NP_876666.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae TW-183]
 gi|33236234|gb|AAP98323.1| coproporphyrinogen oxidase III oxygen-independent [Chlamydophila
           pneumoniae TW-183]
          Length = 381

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 194/386 (50%), Gaps = 17/386 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPR 69
           M   G   L +Y+H PFC KKC YC F +   + +     +  + +   ++ +  +    
Sbjct: 7   MLMNGKAPLALYIHIPFCTKKCRYCSFYTIPYKSES-VSLYCNAVIQEGLRKLAPIQETH 65

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++FFGGGTPSL+ P ++  IL  +A +       EIT+EANP ++ V+  +  ++  
Sbjct: 66  FIETVFFGGGTPSLVSPLDLKRILKELAPHAR-----EITLEANPENLTVSYLRQLQETP 120

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWE 188
           +NRIS+GVQ+ ++  L+ LGR H++S AI A+   + + F  +S DLIY LP Q++  + 
Sbjct: 121 INRISVGVQTFDDSILQLLGRTHSSSAAITALQECQNHGFSNLSIDLIYGLPTQSLEIFL 180

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + G 
Sbjct: 181 SDLHQALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQGF 240

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+++++     + HNL YW    ++G+G  A   +    H        H   +L+ V
Sbjct: 241 QRYELASYAKPDYPAKHNLYYWTDRPFLGLGVSASQYL----HGERSKNYSHISHYLRAV 296

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
           RKN       E L  +++  E L + LRL EG  + ++       L     ++++ Q   
Sbjct: 297 RKNLPTQETSEILPKKERIKEALALRLRLLEGADLAEF----PSTLISMLTQDVKLQNLF 352

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
             V    L   ++G    D++   + 
Sbjct: 353 S-VHGQCLALNRQGRLFHDTIAEEIM 377


>gi|2317920|gb|AAB66374.1| oxygen-indendent coproporphyrinogen III dehydrogenase [Cupriavidus
           necator]
          Length = 491

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 155/402 (38%), Gaps = 26/402 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y + +    +++L +Y+H PFC   C YC  N  + R       ++     EM  + 
Sbjct: 48  LSLYHDALAACRADALSLYLHIPFCENICYYCGCNKIITRDHGRSARYVNYLGREMALVA 107

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
              GPR  +    +GGGTP+ ++P  +  ++  + +++ +++  E +IE +P  V+    
Sbjct: 108 DRLGPRRQVLQSHWGGGTPTFLDPGEMRRVMALLHEHFELAAEGEHSIEIDPRRVDHARM 167

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPK 181
               + G NR+SLGVQ  + +  + + R     E  A +  AR   F  +S DLIY LP 
Sbjct: 168 ALLAELGFNRVSLGVQDFDPEVQQAIHRIQPFEETRAVVDAARTLGFRSVSLDLIYGLPH 227

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   T  
Sbjct: 228 QTAARFGRTIDQVLALRPDRLSVYSYAHLPH-VFKPQRRIDENALPPAGEKLDILVSTIE 286

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVG 289
             SA G     + + +           E     N+  Y      D +G+G  A   +   
Sbjct: 287 RLSAEGYVYIGMDHFALPDDDLAVAQREGRLQRNFQGYSTHAGYDQVGLGISAIGAIAGR 346

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             + A    +  + +   +      +     +S++      ++  L     + +   E  
Sbjct: 347 YVQNA----RTLDEYYGALDHGRLPLARGVAMSADDHLRREIIGALMCNGVLDIPALEAR 402

Query: 350 AGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTM 385
            G          L         G + +    R+  T  G  +
Sbjct: 403 HGIRFGTAFAPELADLAALGADGLV-QCAPDRITVTPLGRLL 443


>gi|160898224|ref|YP_001563806.1| coproporphyrinogen III oxidase [Delftia acidovorans SPH-1]
 gi|160363808|gb|ABX35421.1| oxygen-independent coproporphyrinogen III oxidase [Delftia
           acidovorans SPH-1]
          Length = 460

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/410 (20%), Positives = 155/410 (37%), Gaps = 28/410 (6%)

Query: 2   KYLSAYEN--NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+ A +   + T   +  L +YVH PFC   C YC  N  V R+      ++     EM
Sbjct: 36  DYILALQQRKSSTAARATPLSLYVHVPFCESLCYYCACNKIVTRHHDRAAVYLDYLAREM 95

Query: 60  QW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                     +++S +  GGGTP+      +  ++  + +++ +    E +IE +P +V 
Sbjct: 96  ALHTAHCGKGQTVSQLHLGGGTPTFFSDDELRTLMGLLREHFKLEPGGEYSIEVDPRTVS 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
           V      ++ G NR+S GVQ  +EQ    + R   A +    +  AR   F  ++ DLIY
Sbjct: 156 VERLAVLKELGFNRLSFGVQDFDEQVQIAVHRVQPAEQVFELVAAARQLGFASINVDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQT   +E  L +  +   D ++LY         F    +     LP     + + +
Sbjct: 216 GLPKQTPESFERTLAQVNALRPDRIALYAYAHLPE-RFKPQRRIAAEDLPQGADKLAMLS 274

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
            + +     G     + + +           +   + N+  Y      D I +G  A  +
Sbjct: 275 RSIAAFMDGGYVYVGMDHFALPEDSLAVAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGK 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K  E +   +  +   VV    LS +      ++M +  +  +  + 
Sbjct: 335 VGASYSQNA----KTLEEYYDAIDASHLPVVRGLALSRDDLVRRAVIMAIMCQGAVLFEP 390

Query: 346 WEM------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            E             ++    +LQ +G ++       + T  G   +  V
Sbjct: 391 MEQAWLLGFREYFAPEMAALEDLQAKGLVQISDEG-FQVTPMGWYFVRGV 439


>gi|224372610|ref|YP_002606982.1| coproporphyrinogen III oxidase [Nautilia profundicola AmH]
 gi|223589420|gb|ACM93156.1| oxygen-independent coproporphyrinogen III oxidase [Nautilia
           profundicola AmH]
          Length = 454

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/399 (20%), Positives = 165/399 (41%), Gaps = 29/399 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +    L +Y H PFC   C +C  N         +  +I+    E++ + + L   R + 
Sbjct: 43  KSDKPLSLYFHLPFCKSACYFCGCNVIYTSKADKRTKYIEYLEKELETLSKHLDTSRVVR 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P+ +A +   I K++     + EI++E +P      +    ++ GVN
Sbjct: 103 QVHFGGGTPTFFTPEELAEVYALIKKHFKNYEKDAEISVEIDPRFFSREHMDVMKEFGVN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           RIS GVQ   E++ + + R         A+ +AR      ++ DLIY LP Q++  ++  
Sbjct: 163 RISFGVQDFNEETQKAVNRIQPFDLTKEAVDIAREAGINSINIDLIYGLPYQSLETFKKT 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L    D L+++        +   M K  +  LPS    + ++         +G   
Sbjct: 223 LDLVLKLNPDRLAVFNYAHVP-WMKKGMRKIDETTLPSPEEKLKIFKYVIDFFENNGYIM 281

Query: 251 YEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D IG+G  +    +     V +  
Sbjct: 282 VGMDHFAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGVGLTSIGETED----VYMQN 336

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--- 354
            K  +++ K V +    V     LS E +  ++++M +       +K +E   G N    
Sbjct: 337 YKDLKNYEKAVDEGKIPVFRGVILSEEDKIRKYIIMEMMANFSFDIKRFENKFGINFFDK 396

Query: 355 ---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              +++  +    +G +E +   +++  + G  ++ +++
Sbjct: 397 FKDEVKELQEFVDEGLVE-ITPEKIKVNKTGSLLIRNIV 434


>gi|91784925|ref|YP_560131.1| coproporphyrinogen III oxidase [Burkholderia xenovorans LB400]
 gi|91688879|gb|ABE32079.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia xenovorans LB400]
          Length = 461

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/390 (21%), Positives = 147/390 (37%), Gaps = 31/390 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  S  L +Y H PFC   C YC  N    + +     ++     E+  
Sbjct: 40  DYLRAAAD--PGASSTDLSLYFHIPFCDTVCFYCGCNKIATKNRAHARPYLDQLKREIAL 97

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
                   R +S + +GGGTP+ +     A ++    +++T+  +   E +IE +P    
Sbjct: 98  QAVCFDTRRPVSQLHWGGGTPTFLSHDETAELMAATREHFTLLPDAEAEYSIEVDPREAS 157

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  RK G NR+SLGVQ  +    + + R        + +  AR+  F  +  DLIY
Sbjct: 158 PETIAHLRKLGFNRLSLGVQDFDPVVQQAINRIQPLEMTASVMQAARDTGFHSIGVDLIY 217

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L   +  A D LS++        LF    +     LPS +V + +  
Sbjct: 218 GLPHQTVESFSRTLDTMIELAPDRLSVFAYAHMPQ-LFKMQRQMDPATLPSPDVRLAILQ 276

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHS 284
                 +  G     + + +    E        +LH  N+  Y      D IG G  +  
Sbjct: 277 RVVERLTGAGYVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIG 335

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V     + A    K    +   +     A+     L+++ +    ++  L     +   
Sbjct: 336 KVGDVYAQNA----KDLPGYAAAIDSGKLAITRGVRLTADDRLRRDVITQLMCNLELRFD 391

Query: 345 DWEMLAGRNL------DIECERNLQRQGFI 368
           ++E   G         ++E  R  ++ G +
Sbjct: 392 EFEAAYGIRFAETFEPELERLRGFEQDGLV 421


>gi|212637756|ref|YP_002314281.1| coproporphyrinogen III oxidase [Shewanella piezotolerans WP3]
 gi|212559240|gb|ACJ31694.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
          Length = 458

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 164/401 (40%), Gaps = 25/401 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H PFC K C YC  N  + R++   + +I+    E+     L   
Sbjct: 44  TSIKNSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYIEYLAAEIVKRAPLFKD 103

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P+ I  +   +  N+ V+   E +IE +P  +E++     ++A
Sbjct: 104 YLVTQIHWGGGTPTFLTPEQILTLSALVKANFNVAEVGEYSIEVDPREIELSMLDTLKEA 163

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 164 GFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMARAKELGFVSTNIDLIYGLPHQTPETF 223

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L    D LS++       + F    K  D  L S    +D+ + T    +  G
Sbjct: 224 AETMQRVLDLDPDRLSVFNYAHLP-SRFAAQRKIKDEDLASPQQKLDMLHQTIETLTGAG 282

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 283 YQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 340

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +K    + + +  NGHA+ +   L+ + +    ++  L     + +   E     N +
Sbjct: 341 --QKDVRPYFESIDANGHALWKGCGLNRDDEIRRVVIKQLICHFDLDMAQIEEKLNINFE 398

Query: 356 IECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L           ++     ++  +  G  ++ ++ 
Sbjct: 399 EYFVEDLKLLQTFIDDKLVDITD-RKITISPTGRLLIRNIC 438


>gi|227874750|ref|ZP_03992903.1| possible coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC
           35243]
 gi|227844525|gb|EEJ54681.1| possible coproporphyrinogen dehydrogenase [Mobiluncus mulieris ATCC
           35243]
          Length = 459

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 107/404 (26%), Positives = 166/404 (41%), Gaps = 73/404 (18%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++ G R+I ++FFGGGTP+++ P+++  I   +   + V    E+T EANP +V+    +
Sbjct: 54  EIPGGRAIDTVFFGGGTPTVLPPEDLVQIFYALKDAFGVCPGAEVTTEANPDTVDAGYLE 113

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
                G  R+S G+QS     LR L R H  +   AA+  A+++    S DLIY  P ++
Sbjct: 114 ELAAGGFTRVSFGMQSAVSGVLRVLDRTHTQANLEAAVRAAQSLGLECSVDLIYGTPGES 173

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  W   L+ AL++ V H+S Y L+IE  T   +  + G +     +   + Y +   + 
Sbjct: 174 VADWRESLEAALAFGVSHVSCYALSIEPATALGRELRQGKITPVDPDDQAEKYEIADDLL 233

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK---VGSHRV------- 293
           SA GL  YEISN +  G E  HNL YWR  DY G GPGAHS ++    G  RV       
Sbjct: 234 SAAGLQWYEISNWARPGHECRHNLAYWRNRDYYGFGPGAHSHLRGEHWGRGRVPAGDFPG 293

Query: 294 ----------------------AISIEKHPESWLKMVRKNGHAVVEKEFLSSE------- 324
                                      KHP  W   V      + + E ++ E       
Sbjct: 294 EGGKDCGHDRGLAEGFPPTGSRRFWNLKHPARWAAAVDAGRLPIEDGETVTGESLELEEL 353

Query: 325 -------------QQADEF---LMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---Q 365
                        + A ++   +    R     +  +   LA    + +     QR   +
Sbjct: 354 LLGLRLRDGLDLREYARKYGSGIAADTRKVHRSAASEGSRLAPHEFETKLLAEAQRLAAE 413

Query: 366 GFIERVQFS---------------RLRCTQRGMTMLDSVIANLA 394
           G +E                    R   T+RG  + D+VI  LA
Sbjct: 414 GLLEAEPLGYDSGGSLGEDPHEDPRAVLTRRGRLLADTVIQRLA 457


>gi|74316653|ref|YP_314393.1| coproporphyrinogen III oxidase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056148|gb|AAZ96588.1| oxygen-independent coproporphyrinogen III oxidase HemN
           [Thiobacillus denitrificans ATCC 25259]
          Length = 456

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 87/398 (21%), Positives = 159/398 (39%), Gaps = 26/398 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
             +   +L +Y H PFC   C YC  N    R       ++ +   EM+    L  P R 
Sbjct: 43  RARSDRALSLYAHVPFCDSLCYYCGCNMVATRDYSKTVPYLAAIEREMERTAALVDPGRV 102

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ + P +I  ++  + +N+T++ + EI+ E +P  +   +    R+ G 
Sbjct: 103 VRQLHWGGGTPTYLNPDDIRRLMAMMQRNFTIAPDAEISCEVDPRELTYEHLAALRETGF 162

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ ++    + + R  +       +  AR   F  ++ DLI  LPKQT+  +  
Sbjct: 163 NRLSFGVQDMDSDVQQAVNRIQSEFLIRQVLDWARELGFSSINLDLIVGLPKQTVESFSR 222

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+R  ++A D L+++        +    +   +  LP     + L        +A G  
Sbjct: 223 TLERVTNWAPDRLAVFAYAHVP-WIKKHQNLINEADLPDAATRLGLQQAVNDALAAAGYV 281

Query: 250 AYEISNHSFLGAE---SLHNLNYWRY---------GDYIGIGPGAHSRVKVGSHRVAISI 297
              + + +    E   +  N   WR           D +  G  + S+       V +  
Sbjct: 282 NIGLDHFARPEDELVRAQQNKTLWRNFQGYTTHKDCDILAFGVSSISQTDD----VYMQN 337

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADE----FLMMGLRLREGISVKDWEMLAGRN 353
           +K+ + +      NG AV     L+ + Q        +M  L L      K+W++  G  
Sbjct: 338 DKNLKRYQDRAAANGFAVERGLRLTRDDQVRRDAITRVMCDLELDFAAFGKEWDVSFGDY 397

Query: 354 LDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                   R L   G ++ +   R+  T  G   L ++
Sbjct: 398 FADALVQLRPLADDGLVD-IAADRISVTATGRLFLRNI 434


>gi|126659866|ref|ZP_01730991.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
 gi|126618829|gb|EAZ89573.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
          Length = 465

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/403 (19%), Positives = 163/403 (40%), Gaps = 30/403 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
              +  L +Y H PFC   C +C  N+ +   K   + +++  + +++   +L  P R++
Sbjct: 51  NHKNTPLSLYCHIPFCETACYFCGCNTIITGNKKVADPYLEYLIKDIERTAELISPNRAV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + I +GGGTP+ +    I  + + + KN+ +  + EI+IE NP  ++ N     RK G N
Sbjct: 111 NQIHWGGGTPNYLNQSQIDQLFNTLVKNFNIDKDAEISIEVNPRYLDRNFIFFLRKLGFN 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+Q  + +  + + R          +   R   F  ++ DLIY LP Q    ++  
Sbjct: 171 RISFGIQDFDPKVQKVINRVQPEEMLFNVMGWMREAEFESVNVDLIYGLPYQNRNTFKKT 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +Q+ +    D ++++           + +   D  LP     + +  +T    + +    
Sbjct: 231 VQKTIELDPDRIAVFNFAYIPWIKPAQKNLPVD-ELPDAPEKLAMLQMTIEEFNNNDYLF 289

Query: 251 YEISNHSFLG-----AESLH--NLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +        A+S    + N+  Y      D +  G  + S +    H V +   
Sbjct: 290 IGMDHFAKANDELAIAQSQGDLHRNFQGYTTKPESDLLAFGMTSISML----HDVYVQNH 345

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K  + + K + +    + +   LS +      ++M L  +  +     E     N D++ 
Sbjct: 346 KKIKDYYKALDEGHLPIEKGVTLSKDDIIRRAVIMELMCQSQLYKNRIEEKYNLNFDLDF 405

Query: 359 ----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                      + L+  G I  +   RL  T  G  ++ ++ A
Sbjct: 406 DEYFAQELIDLKPLEADGLIH-LHSDRLEVTNTGRWLIRNIAA 447


>gi|15607073|ref|NP_214455.1| coproporphyrinogen III oxidase [Aquifex aeolicus VF5]
 gi|3913815|sp|O67886|HEMN_AQUAE RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|2984325|gb|AAC07846.1| oxygen-independent coproporphyrinogen II [Aquifex aeolicus VF5]
          Length = 456

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 159/398 (39%), Gaps = 26/398 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
           + +    L +Y H PFC ++C YC  N  +   K  +E +++    EM  + Q L   R 
Sbjct: 45  SNERKTPLSLYFHIPFCEQRCLYCGCNVIISHRKGIEEPYLERVCREMDLVSQYLDKDRK 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ + P+ I   ++ I K +    N EI+IE +P  +     +  + AG 
Sbjct: 105 VIQLHWGGGTPNYLSPEQIKWFMEEIRKRFEFGDNAEISIELDPRYLTDEQIKAIKDAGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
           NRISLGVQ L+ +  + + R          +  L    F  ++ DLIY LP QT   +E 
Sbjct: 165 NRISLGVQDLDPKVQQAVNRVQPYELIKEKMEKLREAGFESINLDLIYGLPYQTKESFEK 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +++ +    D ++ Y          ++     +  LPS    + ++ +  +     G  
Sbjct: 225 TVEKVIELNPDRIATYSFAYIPQVKPHQQLLPKEA-LPSAEEKLRIFEMVINKFQEAGYV 283

Query: 250 AYEISNHSFL-----GAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              + + +        A+    L  N+  Y      + +G G  +   +    +      
Sbjct: 284 YIGMDHFAKPEDELAVAQRKGELWRNFQGYTTKKGVELLGFGATSIGML----YDSYFQN 339

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K    + K V +    V     L+ +      ++M +    G+     E + G N    
Sbjct: 340 WKTLRDYNKTVDEGKIPVFRGYVLNEDDFIRREVIMDIMCNLGVEFSKIENMFGINFREY 399

Query: 358 CE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                   + ++  G I +V+  R++    G  ++ +V
Sbjct: 400 FAKELEELKEMEEDGLI-KVEEDRIKIMPVGRLLIRNV 436


>gi|94312405|ref|YP_585615.1| coproporphyrinogen III oxidase [Cupriavidus metallidurans CH34]
 gi|93356257|gb|ABF10346.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Cupriavidus metallidurans CH34]
          Length = 500

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/404 (21%), Positives = 152/404 (37%), Gaps = 29/404 (7%)

Query: 5   SAYENNMTGQGSN---SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +AY   +    +N    L +YVH PFC   C YC  N  + +       ++     EM  
Sbjct: 62  AAYRRALDACRANVPAPLSLYVHIPFCENICYYCGCNKIITKDHTRSARYVDYLAREMAM 121

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              QL   R++    +GGGTP+ ++P  +  ++  + K++ +    E  IE +P  V  +
Sbjct: 122 AAEQLGERRAVMQSHWGGGTPTFLDPVEMRHVMSALHKHFELLPEGEHAIEIDPRRVGDD 181

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
             +   + G NRISLGVQ  + +  + + R  +  E    +  AR   F  +S DLIY L
Sbjct: 182 RMELLGELGFNRISLGVQDFDPEVQQAIHRVQSYEETNGVVRAARRLGFRSISMDLIYGL 241

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT  ++   + R L    D LS+Y        +F    +     LP     +D+   T
Sbjct: 242 PHQTTQRFSATIDRVLEMRPDRLSVYSYAHLPH-VFKPQRRIDPAALPPAAEKLDILVST 300

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
               +A G     + + +           E     N+  Y      D +G G  A   V 
Sbjct: 301 IERLTAAGYVYIGMDHFALPNDDLAIAQREGRLQRNFQGYATHAGYDQLGFGVSAIGAVA 360

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               + A +     + +   + K    +V     S + +  +F++  L     + +   E
Sbjct: 361 GHYAQNARTT----DEYYAALDKGQLPIVRGFETSEDDRLRKFIIGELMCNGTLDIPAVE 416

Query: 348 MLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTM 385
                N   +    L           + R +  R+  T  G  +
Sbjct: 417 ASYSINFAQKFAAELVDLDKLALDHLLRRTRN-RIEITPLGRLL 459


>gi|16330810|ref|NP_441538.1| coproporphyrinogen III oxidase [Synechocystis sp. PCC 6803]
 gi|3122206|sp|P74132|HEMN_SYNY3 RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1653303|dbj|BAA18218.1| oxygen independent coprophorphyrinogen III oxidase [Synechocystis
           sp. PCC 6803]
          Length = 466

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 160/407 (39%), Gaps = 32/407 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGP 68
           N+       L +Y H PFC K C +C  N+ + ++K   + ++++   ++  +  L    
Sbjct: 48  NLGNYKKTPLSLYCHIPFCAKACYFCGCNTIITQHKPAVDPYLKAVAKQIALVAPLVDQQ 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + +GGGTP+ +  +    + + I   + ++ N EI+IE NP  V+ +     R+ 
Sbjct: 108 RPVQQLHWGGGTPNYLTLEQAEFLFNTITDAFPLAENAEISIEINPCYVDKDYIFALRQL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    Q  + + R    +     +   R   F  ++ DLIY LP Q +  +
Sbjct: 168 GFNRISFGIQDFNSQVQQAVNRIQPEAMLFQVMDWIRQANFDSVNVDLIYGLPHQNLATF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L++      D ++++           +  K  +  LP     + +   T +  +  G
Sbjct: 228 RETLRKTAQLNPDRIAVFNFAYVPWLKPVQK-KMPESALPPAEEKLKIMQATIADLTEQG 286

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E         LH  N+  Y      D +G G  + S ++     V 
Sbjct: 287 YVFIGMDHFAKPDDELAIAQRRGELHR-NFQGYTTQPESDLLGFGITSISMLQD----VY 341

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               K  +++   + +    + +   LS +      ++  L  +  +S ++ E       
Sbjct: 342 AQNHKTLKAFYNALDREVMPIEKGFKLSQDDLIRRTVIKELMCQFKLSAQELESKYNLGF 401

Query: 355 D----------IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           D          +     L+  G + R+    L  T RG  ++ ++ A
Sbjct: 402 DCDFNDYFAKELSALDVLEADGLLRRLGDG-LEVTPRGRILIRNIAA 447


>gi|209966437|ref|YP_002299352.1| oxygen-independent coproporphyrinogen III oxidase [Rhodospirillum
           centenum SW]
 gi|209959903|gb|ACJ00540.1| oxygen-independent coproporphyrinogen III oxidase [Rhodospirillum
           centenum SW]
          Length = 450

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/396 (20%), Positives = 157/396 (39%), Gaps = 25/396 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISS 73
              +L +Y+H PFC   C YC  ++ V  +      ++Q+   E++ +  L      ++ 
Sbjct: 44  ADGTLSLYLHIPFCRSMCWYCGCHTVVVPHDDPIRTYLQALTREIRTVSALLPAGPRVTH 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP+LI     A +++G+ + +   ++ E+ IE +P ++           G+NR 
Sbjct: 104 LHFGGGTPTLIPADAFAELMEGMREAFRFDADAELAIEVDPRTLPEALPAVLAAGGINRA 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS +    + + R  +      A+   R      ++ DL+Y LP QT+      ++
Sbjct: 164 SLGVQSFDPVVQKAINRFQSPEMTAEAVARLRAAGIAGINLDLLYGLPHQTVESCIETVR 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL+   D LS++       +      + G+  LP     +      ++     G     
Sbjct: 224 TALTMDPDRLSVFGYAHMP-SFKSHQSRIGEDHLPDAEERIRQVLALEATLQEAGYVRIG 282

Query: 253 ISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +           +     N+  Y        IG G  A  R+  G     + +   
Sbjct: 283 MDHFAKPDDPIAVAARDGRLRRNFQGYTTDSADALIGFGASAIGRMPQGFVANIVPVP-- 340

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
              + K V ++G AV     +S + +    L+  +  +  + +       GR +      
Sbjct: 341 --GYQKAVAESGLAVGRGFRVSDDDRLRARLIERVMCQFEVDIDAIAQEFGRPVASVLPP 398

Query: 359 ---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                 L+  G IE ++ +RLR       ++ SV A
Sbjct: 399 RADLARLRDDGLIE-LEGNRLRVVDEARPLVRSVAA 433


>gi|71278542|ref|YP_271462.1| coproporphyrinogen III oxidase [Colwellia psychrerythraea 34H]
 gi|71144282|gb|AAZ24755.1| oxygen-independent coproporphyrinogen III oxidase [Colwellia
           psychrerythraea 34H]
          Length = 456

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/404 (21%), Positives = 162/404 (40%), Gaps = 31/404 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            ++ A EN+     +  L +YVH PFC   C YC  N  + R++   + +++    E+  
Sbjct: 39  DFIKAIENS----QNRELSLYVHIPFCHTLCYYCGCNKVITRHRGKADTYLEYLAQEIAL 94

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L    ++  + +GGGTPS +    I  ++  + + +  S  +E++IE +P  +E++ 
Sbjct: 95  QAPLFEEYTVKQLHWGGGTPSFLTHPQITQLVSLLKEKFNFSDELEMSIEIDPREIEMDL 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
            +     G NR+SLGVQ L+ +  + + R  +       I  A+   F  ++ DLIY LP
Sbjct: 155 AEHLYSLGFNRLSLGVQDLDLKVQQAINRVQSTEFIGDFIQHAKEVGFKSINIDLIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+  +   L +A  + VD +SL+       + F    K  D  LPS      L  L  
Sbjct: 215 HQTLENFTKTLVKAHEWDVDRISLFSYAHIP-SRFAAQRKLRDEWLPSTQEKFALMKLAI 273

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
                 G     + + +    E        +LH  N+  Y      D +G+G  + S + 
Sbjct: 274 ETLCDFGYDFIGMDHFAKPNDELAIAQSDGTLHR-NFQGYTTKGGCDLLGLGVSSISSIG 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      K  + + + + +  HA ++   LS +      ++  L     +  +   
Sbjct: 333 NSFSQNI----KDLKEYYQAITEKQHAQIKGVSLSEDDILRGEVIQELMCNLYLDKQVIS 388

Query: 348 MLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTM 385
                + D     +L         G +E      ++  Q+   +
Sbjct: 389 EKYNIDFDEYFAEDLPLLNTFIDDGLVEN-NAQHIKVEQKARLL 431


>gi|315022479|gb|EFT35506.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Riemerella anatipestifer
           RA-YM]
          Length = 350

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 99/351 (28%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +++ + +   E+   +     +S+ S++FGGGTPS++    I  ++D + + +T +S++E
Sbjct: 4   KDDILLALKKELYLRQHELENKSLPSLYFGGGTPSILSVDEIQRLIDEVLRYFTFNSDIE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN- 166
           IT+EANP  +  +  +      +NR+S+G QS  E+ L+ + R H+ASEA ++I  A++ 
Sbjct: 64  ITLEANPDDLNQSFLKALSNTPINRLSIGTQSFFEEDLKLMNRAHSASEAESSIKRAQDT 123

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F  +S DLIY  P    + W+  LQ+++   V H+S Y LT+E  T   K  +   +  
Sbjct: 124 GFENISIDLIYGSPTSNHSLWKESLQKSIELQVPHISSYALTVEPKTALQKWIEQEKINA 183

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E      +        ++G   YEISN S     S HN  YW+   Y+GIGP AHS  
Sbjct: 184 PKEEEQFIAFQYLSETLKSNGFEHYEISNFSKPNYHSRHNTAYWKGLPYLGIGPSAHSY- 242

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  + + +I  +   ++K + +N     E E LS ++Q +E +M+GLR + G+     
Sbjct: 243 -DGQKQRSWNIANN-SLYIKSLVENSLP-KETEILSEKEQFNELIMIGLRTKWGVKYNII 299

Query: 347 EMLAGRNLDIECERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLAV 395
                  +    +++L+ +  +   +++ +++   +    M D +I++L V
Sbjct: 300 NQ-FSEKILKPFQKSLETKLSLGTLKLEENQIFIPEEHWFMADGIISDLFV 349


>gi|296120417|ref|YP_003628195.1| coproporphyrinogen dehydrogenase [Planctomyces limnophilus DSM
           3776]
 gi|296012757|gb|ADG65996.1| Coproporphyrinogen dehydrogenase [Planctomyces limnophilus DSM
           3776]
          Length = 465

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 93/397 (23%), Positives = 176/397 (44%), Gaps = 22/397 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG- 67
                     LG+Y+H PFC K+C +C F  +  +     E ++++   E++ + QL   
Sbjct: 66  MAAPPASKAPLGLYLHIPFCRKRCKFCYFRVYTNQNAKAIEQYVEALAREVELVSQLPAI 125

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R +  ++FGGGTPS +  + +  + + ++ + +     E+T E  P ++        +
Sbjct: 126 QGRKLKFVYFGGGTPSYLSSKQLRFLREKLSAHISWDDAEEVTFECEPGTLHEEKVATLK 185

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G+ R+SLGV++  +Q L   GR H   E   A    +   FP+++ DLI  +  +T  
Sbjct: 186 DIGITRVSLGVENFNDQILEENGRAHKTPEVYRAYEWIQKAGFPQVNIDLIAGMIGETDE 245

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W M ++ A   A  ++++YQ+ +   T+  K  K+     P  + A            A
Sbjct: 246 NWAMNIREARKLAAQNVTIYQMELPFNTIISKEMKELGTASPVADWATKR-RWVSEAMDA 304

Query: 246 HGLHAYEISNHSFLGA-----ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            G   Y IS+ + L       + ++  N WR  D + IG  +   ++   ++    I   
Sbjct: 305 LGEDGYHISSGNELVKNPTTDQFVYRDNVWRGCDLLAIGVSSFGHLQGVHYQNLDRI--- 361

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQ-ADEFLMMGLRLREG-ISVKDWEMLAGRNLDIEC 358
            E +L  V +    V      +  Q+   E++   L+++EG +S   +    G N   E 
Sbjct: 362 -EDYLATVERGELPVNRALEPTPHQRLIREWV---LQMKEGQVSAAPFIDKFGINPLEEF 417

Query: 359 ERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIAN 392
              L  Q   G++  V+  R+R T++G+  +DS++  
Sbjct: 418 RTPLANQAARGYLV-VEEDRVRLTRKGLLQVDSLLPE 453


>gi|308233985|ref|ZP_07664722.1| Coproporphyrinogen dehydrogenase [Atopobium vaginae DSM 15829]
          Length = 424

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 173/414 (41%), Gaps = 27/414 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ 60
            ++ AY+  +  +  +   +Y+H PFC +KC YCDF S   +        +  +   ++ 
Sbjct: 4   DFMVAYKQRLADKDIHE--LYLHIPFCTQKCGYCDFASWPFKSTTSVPSEYAAALKGQLN 61

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            ++         +++ GGGTPS + P  +  I++   +     +  E + E NP S   +
Sbjct: 62  ELKAANVCEDTETLYIGGGTPSAL-PHELPDIIECACETCP--TLREKSCEVNPESACDD 118

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
                 + G+NR+S GVQS     L+ LGR H  + A+  +   + +   +S DL+ A+P
Sbjct: 119 LLSHMLRQGINRVSCGVQSTNADELKALGRTHTPARALERLCTLKAMGFSVSCDLMCAIP 178

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   W   L   ++  VDH+S+Y LTIE+ T F+  +        SE V     ++  
Sbjct: 179 LQTDDSWLKSLHDVINCKVDHVSIYPLTIEQSTAFWARYAHSHPKFNSEAVQAARMDIAH 238

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            +  ++G   YE S+++    +  HN  YW    YIG+GP A S +   ++R    + K 
Sbjct: 239 DVLESYGYKRYETSSYAQPNEQCDHNCGYWSARTYIGLGPSAASMLTTHAYRRLKQVWKT 298

Query: 301 PESWLKMVRKNGHAVVEK-----------------EFLSSEQQADEFLMMGLRLREGIS- 342
                  + +      +                  EFL+  Q   E LM+  RL  GI  
Sbjct: 299 LPDLPSDIARVRITCTDSRASFIRNPRLSQRKASLEFLTLPQVLAEDLMLEARLARGIEP 358

Query: 343 --VKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +   E + G          L   G +       L+ T +G  + + +   L 
Sbjct: 359 DVISYAEEVLGAQALHATFDRLIDLGLMA-YNHGYLQATHKGWLLGNYIFEALL 411


>gi|332528535|ref|ZP_08404523.1| coproporphyrinogen III oxidase [Hylemonella gracilis ATCC 19624]
 gi|332042046|gb|EGI78384.1| coproporphyrinogen III oxidase [Hylemonella gracilis ATCC 19624]
          Length = 482

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 148/403 (36%), Gaps = 38/403 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------- 70
            L +YVH PFC   C YC  N  + ++      +++    E+    +  G  +       
Sbjct: 66  PLSLYVHVPFCESLCYYCACNKIITKHHERATEYLRYLAREVDLHLEALGATAASGHAPA 125

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           IS +  GGGTP+ +  + +  ++  + + +  +   E +IE +P +++        + G 
Sbjct: 126 ISQLHLGGGTPTFLNDEELRSLMRMLQRAFHFTPGGEYSIEVDPRTIDPARLDVLAELGF 185

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ  +    + + R   A +    +  AR   F  ++ DLIY LP QT   +  
Sbjct: 186 NRLSFGVQDFDPAVQKAVHRVQPARQVFDLVAAARERGFESINIDLIYGLPLQTPESFAR 245

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      D ++LY         F    +     LP     + + +   +     G  
Sbjct: 246 TLDQVGELRPDRIALYAYAHLPE-RFKPQRRIDGAQLPGAAAKLAMLSDALARLQGLGYV 304

Query: 250 AYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              + + +  G        +   + N+  Y      D IG+G  A  R+     + A   
Sbjct: 305 YVGMDHFALPGDALAVAQRQGRLHRNFQGYSTQPDCDLIGLGVSAIGRIGATYSQNA--- 361

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK--------DWEML 349
            K  E +   + +    V     LS +      ++M L  +  +  +        D++  
Sbjct: 362 -KTLEEYYDALDRGSFPVQRGLALSRDDLVRRSVIMALMCQGELMFESINLAWLIDFKTY 420

Query: 350 AGRNLDIECERNLQRQGFIERVQFSR---LRCTQRGMTMLDSV 389
               L     R L  QG +      R   ++ T  G   + ++
Sbjct: 421 FAAEL--AILRGLAEQGLVTLDLDERRGGIQVTPLGWYFVRAI 461


>gi|124267656|ref|YP_001021660.1| coproporphyrinogen III oxidase [Methylibium petroleiphilum PM1]
 gi|124260431|gb|ABM95425.1| coproporphyrinogen III oxidase, anaerobic [Methylibium
           petroleiphilum PM1]
          Length = 476

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 154/393 (39%), Gaps = 26/393 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             L +YVH PFC   C YC  N  + R       +++    E+   + + G R  +S + 
Sbjct: 69  TPLSIYVHIPFCESVCYYCACNKVITRQHRRGTEYLEWLGREVALHQDVIGSRQRVSQLH 128

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ ++   ++ ++  +   + +    E +IE +P +V  +     +  G NR+S 
Sbjct: 129 LGGGTPTFLDDTELSQLMALLRGAFDLQPQAECSIEVDPRTVSASRLAHLKALGFNRLSF 188

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +    + R   A +  A I  AR   F  ++ DLI+ LPKQT       +++ 
Sbjct: 189 GVQDFDPEVQHAVHRVQPAEQVEALIASARALGFDSINVDLIHGLPKQTPASLARTVEQV 248

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                D ++LY         F    +     LP     V + +   +   AHG     + 
Sbjct: 249 ARLRPDRVALYSYAHLPQ-RFKPQRRIHAADLPGTAQRVTMLSNAIAAFLAHGYDYIGMD 307

Query: 255 NHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +  G        +   + N+  Y      D IG+G  A  R+     + A    K   
Sbjct: 308 HFALPGDALAAAKRQGRLHRNFQGYSTQPDCDLIGLGVSAIGRIGATYSQNA----KTLP 363

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            +   +R     VV    L+ +      ++M L  +  +  +  E+    +     E  L
Sbjct: 364 EYQDALRSGELPVVRGLVLTRDDVVRRSVIMALMCQGRVVFESIELAHLLDFRRYFEAEL 423

Query: 363 QR------QGFIERVQFSRLRCTQRGMTMLDSV 389
           +R      QG IE +    ++ T  G   + +V
Sbjct: 424 RRLQPLAGQGLIE-IDDDAIQLTPLGWYFVRAV 455


>gi|325335439|gb|ADZ11713.1| Coproporphyrinogen III oxidase related Fe-S oxidoreductase
           [Riemerella anatipestifer RA-GD]
          Length = 348

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 99/351 (28%), Positives = 182/351 (51%), Gaps = 8/351 (2%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +++ + +   E+   +     +S+ S++FGGGTPS++    I  ++D + + +T +S++E
Sbjct: 2   KDDILLALKKELYLRQHELENKSLPSLYFGGGTPSILSVDEIQRLIDEVLRYFTFNSDIE 61

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN- 166
           IT+EANP  +  +  +      +NR+S+G QS  E+ L+ + R H+ASEA ++I  A++ 
Sbjct: 62  ITLEANPDDLNQSFLKALSNTPINRLSIGTQSFFEEDLKLMNRAHSASEAESSIKRAQDT 121

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F  +S DLIY  P    + W+  LQ+++   V H+S Y LT+E  T   K  +   +  
Sbjct: 122 GFENISIDLIYGSPTSNHSLWKESLQKSIELQVPHISSYALTVEPKTALQKWIEQEKINA 181

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E      +        ++G   YEISN S     S HN  YW+   Y+GIGP AHS  
Sbjct: 182 PKEEEQFIAFQYLSETLKSNGFEHYEISNFSKPNYHSRHNTAYWKGLPYLGIGPSAHSY- 240

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  + + +I  +   ++K + +N     E E LS ++Q +E +M+GLR + G+     
Sbjct: 241 -DGQKQRSWNIANN-SLYIKSLVENSLP-KETEILSEKEQFNELIMIGLRTKWGVKYNII 297

Query: 347 EMLAGRNLDIECERNLQRQGFI--ERVQFSRLRCTQRGMTMLDSVIANLAV 395
                  +    +++L+ +  +   +++ +++   +    M D +I++L V
Sbjct: 298 NQ-FSEKILKPFQKSLETKLSLGTLKLEENQIFIPEEHWFMADGIISDLFV 347


>gi|113869551|ref|YP_728040.1| coproporphyrinogen III oxidase [Ralstonia eutropha H16]
 gi|113528327|emb|CAJ94672.1| Oxygen-independent coproporphyrinogen III oxidase [Ralstonia
           eutropha H16]
          Length = 522

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 152/405 (37%), Gaps = 29/405 (7%)

Query: 4   LSAYENNMTG---QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           LS Y + +          L +Y+H PFC   C YC  N  + R       ++     EM 
Sbjct: 76  LSLYHDALAACRADAPAPLSLYLHIPFCENICYYCGCNKIITRDHGRSARYVNYLGREMA 135

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +    GPR  +    +GGGTP+ ++P  +  ++  + +++ +++  E +IE +P  V+ 
Sbjct: 136 LVADRLGPRRQVLQSHWGGGTPTFLDPGEMRRVMALLHEHFELAAEGEHSIEIDPRRVDH 195

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
                  + G NR+SLGVQ  + +  + + R     E  A +  AR   F  +S DLIY 
Sbjct: 196 ARMALLAELGFNRVSLGVQDFDPEVQQAIHRIQPFEETRAVVDAARTLGFRSVSLDLIYG 255

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   
Sbjct: 256 LPHQTAARFGRTIDQVLALRPDRLSVYSYAHLPH-VFKPQRRIDENALPPAGEKLDILVS 314

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T    SA G     + + +           E     N+  Y      D +G+G  A   +
Sbjct: 315 TIERLSAEGYVYIGMDHFALPDDDLAVAQREGRLQRNFQGYSTHAGYDQVGLGISAIGAI 374

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                + A    +  + +   +      +     +S++      ++  L     + +   
Sbjct: 375 AGRYVQNA----RTLDEYYGALDHGRLPLARGVAMSADDHLRREIIGALMCNGVLDIPAL 430

Query: 347 EMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTM 385
           E   G          L         G + +    R+  T  G  +
Sbjct: 431 EARHGIRFGTAFAPELADLAALGADGLV-QCAPDRITVTPLGRLL 474


>gi|68571760|gb|AAW66139.2| anaerobic coproporphyrinogen III oxidase [Rubrivivax gelatinosus]
          Length = 462

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/413 (19%), Positives = 157/413 (38%), Gaps = 29/413 (7%)

Query: 2   KYLSAYENNMTGQ---GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE 58
           +Y  A      G    G+  L +Y+H PFC   C YC  N  + ++      ++ +   E
Sbjct: 37  EYRQALRQRAEGSTVGGTPPLSLYIHIPFCESVCYYCACNKIITKHHERSAEYLDALEAE 96

Query: 59  MQW-MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +   + +L   +S+S + FGGG+P+ +  + I  ++  +  ++ + +  EI+IE +P + 
Sbjct: 97  IALHVAELGKGQSVSQLHFGGGSPTFLTDEEIGRLMARLRDSFKIVAGAEISIEVDPRTA 156

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLI 176
                Q     G NRIS G+Q  +      + R  +       +  AR N F  ++ DLI
Sbjct: 157 TPERLQSLAGMGFNRISFGIQDFDADVQVAVHRVQSFESVRDLVVAARANGFESINADLI 216

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +Q+      D ++LY         F    +     LP     + + 
Sbjct: 217 YGLPKQTPESFTRTIQQIAELRPDRIALYAYAHLPD-RFKPQRRILAEELPKGESRIKML 275

Query: 237 NLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHS 284
               +   A G     + + +  G        +   + N+  Y      D I +G  +  
Sbjct: 276 GGAIAGFIAAGYTYIGMDHFALPGDALSAARRQGRLHRNFQGYSTQPDCDLIALGVSSIG 335

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           R+     + A    K    + + + K    +V    L+ +      ++M +  +  +  +
Sbjct: 336 RMGATYSQNA----KTLPEYYESIGKGEFPIVRGLTLTRDDLLRRAVIMAIMCQGRVEYE 391

Query: 345 DWEM----LAGRNLDIECE--RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             E+            E E  +     G +E +    ++ T  G   +  V A
Sbjct: 392 SIELAHLIKFPEYFAAEIEDLKPFADGGLLE-INADSIQITALGWYYVRGVAA 443


>gi|307721620|ref|YP_003892760.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979713|gb|ADN09748.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 351

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 112/325 (34%), Positives = 166/325 (51%), Gaps = 24/325 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
           VY+H PFC  KC YC FNS+V ++ + +E ++Q+   ++  + +R      +I ++F GG
Sbjct: 3   VYIHIPFCDSKCSYCAFNSYVDKFHL-KEKYMQALKKQLQHELLRFQAKKETIETVFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + P+    I   +  N  +  N EIT EANP+S      +G +K GVNRIS G Q
Sbjct: 62  GTPSTVNPKLYEDIFALL--NPYLVHNAEITSEANPNSATKEWLEGMKKLGVNRISFGTQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++ L+ L R H    +I A+H A  I F  +S DLIYA    T      +L  A+S 
Sbjct: 120 TFDKEKLKLLNRAHTPQISIDAVHNASQIGFKNISLDLIYATLGDTKELLASDLHVAMSL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S Y L IE+GT F    +     L                   +G   YEISN  
Sbjct: 180 PINHISAYALMIEEGTAFENRPQMSSEQLSLTKWLFQKIQ-------KYGFKQYEISNFG 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +SLHNL YW+Y DYIG G GA  ++ +        IE + ++ LK         ++
Sbjct: 233 --TYQSLHNLGYWKYKDYIGAGAGAVGKLGLMRFYPQTDIETYIDNPLK---------IQ 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGIS 342
           +E LS E +  E + +GLR   GI+
Sbjct: 282 EEMLSQEDKRLEQIFLGLRSVVGIN 306


>gi|15618295|ref|NP_224580.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae CWL029]
 gi|15835913|ref|NP_300437.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
 gi|4376658|gb|AAD18524.1| Coproporphyrinogen III Oxidase [Chlamydophila pneumoniae CWL029]
 gi|8978752|dbj|BAA98588.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
          Length = 373

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 17/382 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISS 73
           G   L +Y+H PFC KKC YC F +   + +     +  + +   ++ +  +     I +
Sbjct: 3   GKAPLALYIHIPFCTKKCRYCSFYTIPYKSES-VSLYCNAVIQEGLRKLAPIQETHFIET 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+ P ++  IL  +A +       EIT+EANP ++ V+  +  ++  +NRI
Sbjct: 62  VFFGGGTPSLVSPLDLKRILKELAPHAR-----EITLEANPENLTVSYLRQLQETPINRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ ++  L+ LGR H++S AI A+   + + F  +S DLIY LP Q++  +  +L 
Sbjct: 117 SVGVQTFDDSILQLLGRTHSSSAAITALQECQNHGFSNLSIDLIYGLPTQSLEIFLSDLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + G   YE
Sbjct: 177 QALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQGFQRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++     + HNL YW    ++G+G  A   +    H        H   +L+ VRKN 
Sbjct: 237 LASYAKPDYPAKHNLYYWTDRPFLGLGVSASQYL----HGERSKNYSHISHYLRAVRKNL 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
                 E L  +++  E L + LRL EG  + ++       L     ++++ Q     V 
Sbjct: 293 PTQETSEILPKKERIKEALALRLRLLEGADLAEF----PSTLISMLTQDVKLQNLFS-VH 347

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              L   ++G    D++   + 
Sbjct: 348 GQCLALNRQGRLFHDTIAEEIM 369


>gi|171318308|ref|ZP_02907468.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
 gi|171096510|gb|EDT41407.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           ambifaria MEX-5]
          Length = 463

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/414 (20%), Positives = 153/414 (36%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N            +++    E+  
Sbjct: 42  DYVRAARD--PGASSSDLSLYFHIPFCNTACFYCGCNKIATNNHRRARPYLEQLKRELAQ 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L  P R ++ + +GGGTP+ +    +A +       + ++   + E +IE +P +V 
Sbjct: 100 QAALFDPARPVTQLHWGGGTPTFLSDAEMAELTAATRDYFVLAPDADAEFSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    + + R    +     +  AR   F  +S DLIY
Sbjct: 160 PARLVHLRNIGFNRLSLGVQDFDPVVQQAINRVQPLALTADLLSAARTTGFHSVSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP   + + L  
Sbjct: 220 GLPHQTVAVFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRQIDDATLPPPEMRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      + IG G  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTNLIGFGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +      +     L+++      ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTADDLLRRDVITQLMCNLELPFSH 394

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G        R L      ++ G +  +   RL     G  ++ ++    
Sbjct: 395 IEAAHGIRFADHFARELDALRGFEQDGLLT-IAGDRLTIHPAGRMVVRNIAMAF 447


>gi|325265721|ref|ZP_08132410.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
 gi|324982852|gb|EGC18475.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
          Length = 505

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/446 (17%), Positives = 158/446 (35%), Gaps = 65/446 (14%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   +N + G    ++ +YVH PFC   C YC  N  + +     + ++     EM  
Sbjct: 46  EYIQVLDNTLNG-NEKAVSLYVHIPFCNVICYYCGCNKVITKDTRKADEYLTYLEKEMAL 104

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           ++  L G   ++ + FGGGTP+ +  + +  +   I +++ +  + E +IE +P  V   
Sbjct: 105 LKPHLHGRHKLAQLHFGGGTPTFLSDEQLERVFRMIGEHFELMPDGEYSIEIDPRKVSRE 164

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
           +     K G NR+S+G+Q  + +    + R     E    I  AR+  F  +S DLIY L
Sbjct: 165 SVFKLAKLGFNRMSVGIQDFDPKVQAAVNRIQTVEETQNVIEAARDAGFKSISVDLIYGL 224

Query: 180 PKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           P Q++   +  L   L +   D ++LY        +F    +     +PS    +D+   
Sbjct: 225 PHQSVESIKPTLDTVLNALNPDRIALYHYAHLPH-IFKPQRRIDTNAVPSSEEKLDILQY 283

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
              + +  G     + + +           E     N+  Y      D I IG  +  +V
Sbjct: 284 AVQLLNEKGYVFIGMDHFAKPEDELSVALKEGRLQRNFQGYSTHADCDLIAIGVSSIGKV 343

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +     +++ + +   +      V+    LS +      ++  L  R  +   D+
Sbjct: 344 ANTYSQN----QRNLDDYYADLDAGRLPVMRGIVLSEDDILRREIIQDLMCRFAVDFDDY 399

Query: 347 EML-------------------------------------AGRNLDIECERN------LQ 363
                                                    G  +             L 
Sbjct: 400 RDRLPAGAAKQNSAELAHIQKMAELGIISGELLRRCEETQGGSPIANYFAEEIKDMWRLA 459

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSV 389
             G +       +R T +G  ++ ++
Sbjct: 460 ESGLVAITDDG-IRVTPKGRFLIRNI 484


>gi|73543005|ref|YP_297525.1| coproporphyrinogen III oxidase [Ralstonia eutropha JMP134]
 gi|72120418|gb|AAZ62681.1| coproporphyrinogen III oxidase, anaerobic [Ralstonia eutropha
           JMP134]
          Length = 489

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 82/401 (20%), Positives = 149/401 (37%), Gaps = 26/401 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
            A   +        L +Y+H PFC   C YC  N  + R       ++     EM     
Sbjct: 52  HASLADCRAAAPAPLSLYLHIPFCENICYYCGCNKVITRDHGRSAKYVHYLAKEMALAAA 111

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            + G R +    +GGGTP+ + P+ +  ++  + +++ + +  E +IE +P  V+     
Sbjct: 112 HIGGRRQVLQSHWGGGTPTFLNPEEMRRVMVSLHEHFDLPAEGEHSIEIDPRRVDHARMA 171

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
              + G NR+SLGVQ  + +  + + R     E  A +  AR   F  +S DLIY LP Q
Sbjct: 172 LLAELGFNRVSLGVQDFDPEVQQAIHRVQPFEETRAVVDAARELGFRSVSLDLIYGLPHQ 231

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  ++   +++ L+   D LS+Y        +F    +  +  LPS    +D+   T   
Sbjct: 232 TTARFNATVEQVLTLRPDRLSVYSYAHLPH-VFKPQRRIDENALPSAGEKLDILVSTIER 290

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +A G     + + +           E     N+  Y      D +G G  A   V    
Sbjct: 291 LTAAGYVYIGMDHFALPDDDLAVAQREGRLQRNFQGYSTHAGYDQLGFGISAIGAVAGRY 350

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            + A    +  + +   +      V+    ++ +      ++  L     + +   E   
Sbjct: 351 VQNA----RTLDEYYASLDAGHLPVMRGFAMNQDDHLRREIIGALMCNGVLDITQIEARH 406

Query: 351 GRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTM 385
           G +              L   G + R    R+  T  G  +
Sbjct: 407 GIDFAHAFAAELADLDRLAEDGLVRR-DPRRIEVTLLGRLL 446


>gi|62185033|ref|YP_219818.1| coproporphyrinogen III oxidase [Chlamydophila abortus S26/3]
 gi|62148100|emb|CAH63857.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila abortus S26/3]
          Length = 373

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 105/385 (27%), Positives = 182/385 (47%), Gaps = 23/385 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISS 73
           G + L +Y+H+PFC KKC YC F +     +     +  + L   +Q +  +     + +
Sbjct: 3   GKSPLALYIHFPFCSKKCHYCSFYTIPYNPES-VSLYCNAILQEGLQKLSTIEDTHFVDT 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F GGGTPSLI P  +  I+  +A +       EIT+EANP  +     +      VNRI
Sbjct: 62  VFLGGGTPSLIPPHYLHNIIQTLAPHAQ-----EITLEANPEDLSEFYLRELLLTAVNRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+G Q+  +  L+ LGR H+++ +I A+H         +S DLIY LP Q++  +  +L 
Sbjct: 117 SIGAQTFHDPLLKALGRIHSSAASIDAVHRCYEHGYNNISLDLIYGLPTQSLADFITDLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LT++  T FYK  +     +  +++   +    + + ++ G   YE
Sbjct: 177 QALTLPIAHISLYNLTLDPHTSFYKHRRILAPSIADDDILAAMSLSAEELLTSRGFSRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++   A+S HNL YW    ++G+G  A   +    H+V          +L+ VRKN 
Sbjct: 237 LASYAKSQAQSKHNLYYWTDQPFLGLGVSASQYI----HKVRSKNLSRISQYLRAVRKNL 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV- 371
                 E L   ++  E L + LRL +G   KD+              +L     I+ + 
Sbjct: 293 PVHESTESLPENERIKEALALRLRLTQGARWKDF--------PAPLMESLASLPLIKELF 344

Query: 372 --QFSRLRCTQRGMTMLDSVIANLA 394
                 L   ++G    D++   + 
Sbjct: 345 GHNNEFLFLNKQGRLFHDTIAEEIM 369


>gi|89093167|ref|ZP_01166117.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
 gi|89082463|gb|EAR61685.1| coproporphyrinogen III oxidase [Oceanospirillum sp. MED92]
          Length = 462

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 159/405 (39%), Gaps = 30/405 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
           T      L +YVH PFC   C YC  N  + R +   + ++ +   EM+ + +  +  R 
Sbjct: 48  TADLEAPLSLYVHIPFCEHVCYYCACNKVITRNRKKAQPYLDTVYREMEQLSKWYSNNRP 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           ++ + +GGGTP+ I  + +  ++D + K++ +    + + +IE +P    +   +  R  
Sbjct: 108 VTQLHWGGGTPTFISHEQMIELMDQMRKHFNLLDDDSGDYSIEIDPREASLETIKVLRDI 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRISLG+Q ++ +    + R  +  +  A +  AR   F  ++ DLIY LP QT+  +
Sbjct: 168 GFNRISLGLQDIDPKVQEAVNRVQSVEQTAAILEEARRLGFRSLNLDLIYGLPYQTLEGF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   +    D LS++         F       +  LPS    + +   T +     G
Sbjct: 228 NATLDTVIEMNPDRLSVFNYAHLPD-RFRPQRHIQEDTLPSPETKLAILESTINKLLEAG 286

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      D I +G  A S+V    ++  
Sbjct: 287 YVYIGMDHFAKPDDELAVAQRTGNLHR-NFQGYTTHAECDLIAMGVSAISQVGSVYYQN- 344

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
              E    ++   V  N +A+     L+ +      ++  L     +  +  E       
Sbjct: 345 ---EHEMAAYSAAVEDNQNAIKRGVSLTQDDIIRRQVITQLICHFELDKRTIEEAYSIKF 401

Query: 355 DIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           D      L         G I  ++ + ++ T  G  ++  +    
Sbjct: 402 DDYFADALAELQAFTTDGLIA-LEENLIQVTPAGRLLIRRICMAF 445


>gi|89900724|ref|YP_523195.1| coproporphyrinogen III oxidase [Rhodoferax ferrireducens T118]
 gi|89345461|gb|ABD69664.1| oxygen-independent coproporphyrinogen III oxidase [Rhodoferax
           ferrireducens T118]
          Length = 465

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 162/412 (39%), Gaps = 32/412 (7%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y  A +    G  +    L +YVH PFC   C YC  N  + ++      +++    E+
Sbjct: 41  DYTQALKLRRAGGAAMTLPLSLYVHIPFCESLCYYCACNKIITKHHDRAGPYLRYLSREV 100

Query: 60  QWMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
               +  G  ++++ +  GGG+P+ +    +  ++  + +N+T + + E +IE +P +++
Sbjct: 101 DLHTEQLGVGQTVTQLHLGGGSPTFLTDDELRELMAMLRRNFTFAPSGEYSIEVDPRTID 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
            +      + G NR+S G+Q  +    + + R   A +  A +  AR   F  ++ DLIY
Sbjct: 161 ASRLDTLAELGFNRLSFGIQDFDPDVQKSVHRVQPAEQVFALVAAARERGFDSINADLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q+   ++  L + +    + ++LY         F    +   + +PS    V +  
Sbjct: 221 GLPLQSPESFDRTLAQVVELRPERIALYAYAHLPE-RFKPQRRIPTVEIPSGAAKVAMLA 279

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
            + +     G     + + +           +   + N+  Y      D IG+G  +  R
Sbjct: 280 RSMAAFMGAGYVYVGMDHFALPTDSLAIAKRQGRLHRNFQGYSTQPDCDLIGLGVSSIGR 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           +     + A    K  E +   + +    VV    L+ +      ++M +  +  +  + 
Sbjct: 340 IGATYSQNA----KTLEEYYDYLDQGRFPVVRGLALTRDDLLRRAVIMAIMCQGQVLFES 395

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                  ++        ++E  + L  QG +       ++ T  G   + +V
Sbjct: 396 IELAHLIEFRKYF--APEMEALQKLADQGMVTVDDVG-IQVTDMGWFFVRAV 444


>gi|325954979|ref|YP_004238639.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
 gi|323437597|gb|ADX68061.1| oxygen-independent coproporphyrinogen III oxidase [Weeksella virosa
           DSM 16922]
          Length = 453

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 157/406 (38%), Gaps = 23/406 (5%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  A++ +   +G   + +Y+H PFC   C +C  N  + +    +  +I + L E +  
Sbjct: 38  FQRAFDESNEEEG---ISIYIHLPFCESLCTFCACNKRITKQHSVEIPYIDTVLKEWKMY 94

Query: 63  RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L   R  I  I  GGGTP+   P+N+  ++DGI     ++   E ++E +P++    +
Sbjct: 95  VDLFSSRPKIKEIHLGGGTPTFFSPENLKKLIDGIFVYADIAEGHEFSLEGHPNNTTKEH 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            Q     G  RIS GVQ  + +  + + R  +      A   AR I F  +S DLI+ LP
Sbjct: 155 LQVLYNLGFKRISYGVQDYDPKVQKAINRVQSFEAVKKATEEAREIGFTSVSHDLIFGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QTM+     +Q       D +S Y                 D  LPS  V   LY   +
Sbjct: 215 HQTMSGMIRTIQLTRELNPDRISFYSYAHVPWIKGVGQRGFQDEDLPSPEVKRALYEEGK 274

Query: 241 SITSAHGLHAYEISNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSRVKV 288
            +    G     + + +       +S+ N     N+  Y        IG+G  + S    
Sbjct: 275 KMFEDMGYFEIGMDHFALEHDSMYQSMKNHTLHRNFMGYSSSKTKLMIGLGVSSIS---- 330

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            S       EK  E +   + +   +V +   L+ E       ++ L      S K  E 
Sbjct: 331 DSWYSFAQNEKTVEEYEASINRGELSVFKGHILTDEDLIVRRHILNLMCNLQTSWKHPEQ 390

Query: 349 LA-GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G +  +    ++ + G IE  +   L   ++G   + +V    
Sbjct: 391 KFDGLSQALYLLEDMVKDGLIEIKENE-LIVNEKGRPFVRNVCMAF 435


>gi|294054734|ref|YP_003548392.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614067|gb|ADE54222.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
          Length = 379

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 16/377 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +LGVY H PFC   C +C F     R +   + ++ +   E      L   R + ++F+G
Sbjct: 7   ALGVYCHVPFCASTCDFCAFYQEKPR-RGDLDRYLDAMDREFDL---LPQDRVVDTVFWG 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP L+  +++  +   + K +      E TIE  PS+V+ +     R  GV RIS+GV
Sbjct: 63  GGTPGLLAAKDLERLGASMLKRFKRPPK-EWTIEMAPSTVKADKMAVLRDLGVTRISMGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L  LGR H  ++   A  + ++  F + + DL++A+P Q + QWE  ++ A  
Sbjct: 122 QSFDAELLESLGRLHRPNQIYKAWDIVQSAGFAQTNLDLMFAIPNQRIEQWEAAIREAAQ 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
               HLS Y LT E+ T  Y     G+L +      +  Y     +    G   YE+SN 
Sbjct: 182 LGPSHLSTYCLTFEEDTALYVKLSKGELKIDEARE-LRFYERGWELLEELGYAQYEVSNF 240

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +   ++ LHNLN WR  ++IG GP A S+              + ++W   ++       
Sbjct: 241 AKPESQCLHNLNTWRMTEWIGCGPSAASQYAGQR----WQRPANIDTWAAGMQSGQPVRE 296

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR----QGFIERVQ 372
           E   L       + ++ GLR+  G+ +            ++  R+L R    +G +   +
Sbjct: 297 EIVDLDDSILFSDSVVFGLRMNAGVDLDALSSRYPEAETVDGVRSLCRKLESEGLLV-AE 355

Query: 373 FSRLRCTQRGMTMLDSV 389
            +++R T  G  + DSV
Sbjct: 356 GAQVRLTHAGRLVCDSV 372


>gi|94500833|ref|ZP_01307359.1| oxygen-independent coproporphyrinogen III oxidase [Oceanobacter sp.
           RED65]
 gi|94426952|gb|EAT11934.1| oxygen-independent coproporphyrinogen III oxidase [Oceanobacter sp.
           RED65]
          Length = 465

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 82/416 (19%), Positives = 170/416 (40%), Gaps = 32/416 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++Y  A E +     S  L +YVH PFC   C YC  N  + +++   + ++     E++
Sbjct: 42  LQYDHARETSTN--QSGPLSLYVHIPFCSHVCYYCACNKIITKHRDKAQPYLDVLFKEIE 99

Query: 61  WMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
              Q     R I  + +GGGTP+ I+ + ++ ++  + +++T+  + + + +IE +P  +
Sbjct: 100 MRSQGYDASRPIEQLHWGGGTPTFIDHEQMSALMKKLGEHFTLLDTDDRDYSIEIDPREL 159

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLI 176
           + +  +  +  G NR+SLGVQ   E+  + + R    S   A +  AR   F  ++ DLI
Sbjct: 160 QDDTLEHLKAIGFNRVSLGVQDFNEKVQKAVNRIQPRSMTEATLSQARELGFKSINIDLI 219

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q    ++  L+  +  + D +S++         F    +  +  LPS    + + 
Sbjct: 220 YGLPFQNRETFKETLETVIELSPDRISVFNYAHLPE-RFMPQRRINEADLPSSEDKLGML 278

Query: 237 NLTQSITSAHGLHAYEISNHSFLG--------AESLHNLNYWRYG-----DYIGIGPGAH 283
             +  + +  G H   + + +           A  LH  N+  Y      D + +G  A 
Sbjct: 279 EDSIKMLTDAGYHYVGMDHFAKPDDSLAQAQMAGKLHR-NFQGYTTHEDCDLVALGVSAI 337

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S+V     + +  I +    ++  +  +   +     LS E      ++  L     +  
Sbjct: 338 SQVGHSYFQNSADINE----YMDNICNDRLPIKRGVVLSDEDDLRRAVIKQLICHFQLDY 393

Query: 344 KDWEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            D E +   +  +     L      Q  G +E      ++   +G  ++ ++    
Sbjct: 394 LDIERVFDIDFKVHFADALDRLHVYQDDGLVEINDKG-IQVKDKGALLIRNICMQF 448


>gi|332664558|ref|YP_004447346.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332333372|gb|AEE50473.1| oxygen-independent coproporphyrinogen III oxidase
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 350

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 111/355 (31%), Positives = 163/355 (45%), Gaps = 21/355 (5%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            + + + E++  +       +SSI+FGGGTPSL++   +  I   I +   V  + EIT+
Sbjct: 1   MVDAIVRELELQKDYLQGAPLSSIYFGGGTPSLLDAGELERIFAKIYQLHAVEVDAEITL 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFP 169
           EANP  +++   Q  R   VNR+S+G+QS  E+ LRF+ R HNA EA A I  A    F 
Sbjct: 61  EANPDDLDLLKLQALRNTPVNRLSIGIQSFAEEDLRFMNRAHNAQEARACIENALSQGFK 120

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DLIY  P  +  QW   L+    Y + HLS Y LT+E  T      K G      E
Sbjct: 121 NLTLDLIYGAPTTSHAQWAKNLETIFQYPIPHLSAYCLTVEPKTALDHFVKKGLAAPVDE 180

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG 289
             A   +      T A G   YEISN +  G  + HN +YW+   Y+GIGP AHS     
Sbjct: 181 EHANAQFQHLMEATKARGFEHYEISNFAQPGWYARHNSSYWQGEPYLGIGPSAHSFNGSS 240

Query: 290 SHRVAISIEKHPESWLKMVRKNGHA------VVEKEFLSSEQQADEFLMMGLRLREGISV 343
                 +  K    +LK++  +         + E+E LS   + +E++M GLR   G S+
Sbjct: 241 RQWNVANNAK----YLKILNDDTPPTLENSGLFERETLSPATRYNEYVMTGLRTIWGCSL 296

Query: 344 KD----WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                 +      N+     + L        VQ  R R +  G  M D + + L 
Sbjct: 297 DKIDPAFRTFFLENIQPFITKELV------LVQEQRYRLSDTGKFMADHIASELF 345


>gi|124028635|sp|O34162|HEMN_RALEH RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
          Length = 494

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 83/405 (20%), Positives = 152/405 (37%), Gaps = 29/405 (7%)

Query: 4   LSAYENNMTG---QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           LS Y + +          L +Y+H PFC   C YC  N  + R       ++     EM 
Sbjct: 48  LSLYHDALAACRADAPAPLSLYLHIPFCENICYYCGCNKIITRDHGRSARYVNYLGREMA 107

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +    GPR  +    +GGGTP+ ++P  +  ++  + +++ +++  E +IE +P  V+ 
Sbjct: 108 LVADRLGPRRQVLQSHWGGGTPTFLDPGEMRRVMALLHEHFELAAEGEHSIEIDPRRVDH 167

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
                  + G NR+SLGVQ  + +  + + R     E  A +  AR   F  +S DLIY 
Sbjct: 168 ARMALLAELGFNRVSLGVQDFDPEVQQAIHRIQPFEETRAVVDAARTLGFRSVSLDLIYG 227

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT  ++   + + L+   D LS+Y        +F    +  +  LP     +D+   
Sbjct: 228 LPHQTAARFGRTIDQVLALRPDRLSVYSYAHLPH-VFKPQRRIDENALPPAGEKLDILVS 286

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRV 286
           T    SA G     + + +           E     N+  Y      D +G+G  A   +
Sbjct: 287 TIERLSAEGYVYIGMDHFALPDDDLAVAQREGRLQRNFQGYSTHAGYDQVGLGISAIGAI 346

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                + A    +  + +   +      +     +S++      ++  L     + +   
Sbjct: 347 AGRYVQNA----RTLDEYYGALDHGRLPLARGVAMSADDHLRREIIGALMCNGVLDIPAL 402

Query: 347 EMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTM 385
           E   G          L         G + +    R+  T  G  +
Sbjct: 403 EARHGIRFGTAFAPELADLAALGADGLV-QCAPDRITVTPLGRLL 446


>gi|72382716|ref|YP_292071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. NATL2A]
 gi|72002566|gb|AAZ58368.1| coproporphyrinogen III oxidase, anaerobic [Prochlorococcus marinus
           str. NATL2A]
          Length = 410

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 119/408 (29%), Positives = 192/408 (47%), Gaps = 37/408 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLT 66
           +     Y+H PFC K+C YCDF+           +         ++     E+       
Sbjct: 3   APPRSAYLHIPFCHKRCFYCDFSIIPLGDSAQSPDSPGITSINSYLDLLHREISI---SP 59

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
              ++S+I+ GGGTPSL++   +  +L  + + +      EIT+E +P++   N+  GY 
Sbjct: 60  KGPALSTIYLGGGTPSLLKKNEVGDLLKNLQRKFGFQDGAEITMEVDPATFFENDLDGYI 119

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALPK 181
             G+NR SLG Q+ ++ +L  +GR HN S+ I A     N+F        S DLI  LP 
Sbjct: 120 GIGINRFSLGAQAFDDSTLASIGRKHNRSQLIEACDWVNNLFKKGMLRSWSLDLIQNLPG 179

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +++W  EL++A+S    HLS+Y LTIE  T+F ++HK G L +P ++ +  +   T  
Sbjct: 180 LNLSKWIKELEQAVSTEAPHLSIYDLTIEPDTVFGRLHKKGKLNIPIDSESQKIDFETTR 239

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           +  + G   YEIS++S  G  S HN  YW    + G G GA S           S  +  
Sbjct: 240 LLKSRGFARYEISSYSLPGHASRHNRMYWSGSGWWGFGMGATS----APWGERFSRPRTI 295

Query: 302 ESWLKMVRKNGHAVVEKEFLSSE----QQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
             + K + +     +EK  LS E       DE LM+GLR REGI +++    AG     +
Sbjct: 296 AGYKKWLEQQESQTLEK-TLSIEKSKSMPLDELLMIGLRRREGIHLEELAKNAGWT-QKK 353

Query: 358 CERNL----------QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           C++NL            +GF+ R          +GM + + ++  + +
Sbjct: 354 CDKNLKSLEKFWLNSINEGFLLRHNGRYFLSDPKGMQISNQILIQMFL 401


>gi|256821774|ref|YP_003145737.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
 gi|256795313|gb|ACV25969.1| oxygen-independent coproporphyrinogen III oxidase [Kangiella
           koreensis DSM 16069]
          Length = 458

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 151/395 (38%), Gaps = 28/395 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+H PFC   C YC  N  + + +   + ++++ + E + +      R ++ I +
Sbjct: 51  KPLSLYLHIPFCENICYYCACNKVITKDRSKADRYLKALVKEAEMIAPYVKGRKVTQIHW 110

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+ +  + I  ++  + + +    +  E +IE +P SV+         AG NR+S+
Sbjct: 111 GGGTPTFLSNEQIEGLVSKLRELFEFDDDNGEFSIEIDPRSVDHKTMASLAHAGFNRLSM 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ    +  + + R     +    +  A R+ F  ++ DLIY LP QT+  +   + + 
Sbjct: 171 GVQDFNPEVQKAVNRIQPEEDTRHLLLQARRHGFNSINIDLIYGLPHQTVESFNETIDKI 230

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++ A D LS++         F    +     LPS +  + +        +  G     + 
Sbjct: 231 ITMAPDRLSVFNYAHLPH-RFKPQRRINSYDLPSASEKLRILESCIKKLTEAGYVYIGMD 289

Query: 255 NHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +    E         LH  N+  Y      D +G+G  +  +V     +         
Sbjct: 290 HFALPHDELTQAQEEGDLHR-NFQGYTTHAECDLVGLGVSSIGQVGNSYSQSMRG----L 344

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           + + + V      V    +L+ +      ++M L     +     E     N        
Sbjct: 345 DEYYEKVEAGELPVWRGCYLTDDDLLRREVIMQLICHFRLDFSQIEKAFNINFKEYFAEE 404

Query: 362 L------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           L      +  G +  V    ++    G  ++ ++ 
Sbjct: 405 LESLVRFEEDGLL-NVNEDSIQVNDAGRLLIRNIC 438


>gi|288818567|ref|YP_003432915.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787967|dbj|BAI69714.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
 gi|308752158|gb|ADO45641.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobacter
           thermophilus TK-6]
          Length = 456

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 81/398 (20%), Positives = 160/398 (40%), Gaps = 26/398 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +    L +Y H PFC   C +C  N  +   K     +++    EM  ++    P RS
Sbjct: 45  SNERKRPLSLYFHIPFCESACWFCGCNVIISHRKDVSRRYLEYIYREMDMLKSYIDPSRS 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +  Q I  +   I +N++  S+ E++ E +P  +     +     G 
Sbjct: 105 VVQLHWGGGTPNFLTNQEIRELFGKIRENFSFDSSAEVSTEIDPRYLSEGQLETLADVGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+E   + + R    S     +   R+  F  ++ DLIY LP QT  +++ 
Sbjct: 165 NRVSMGLQDLDEDVQKAINRIQPESLMREVMKQLRSLGFKSINIDLIYGLPYQTPEKFKR 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +++ +    D ++++        +     K     LP     + +  +T  +  + G  
Sbjct: 225 TIEKTIELDPDRVAVFNFAYVP-WIKPLQRKMDASTLPPPEDKLKMLEMTIELFQSAGYV 283

Query: 250 AYEISNHSFLG-----AESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              + + +        A+    L  N+  Y      D IGIG  +   +  G  +     
Sbjct: 284 FIGMDHFAKPDDELAKAQKEGTLWRNFQGYTTKKGVDLIGIGATSIGMLYDGYFQNY--- 340

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K    +   +      V+    L+ E      ++M L      S +  E + G   +I 
Sbjct: 341 -KTIRDYYMALDGKKLPVMRGYLLTYEDLIRREVIMDLMCNFTCSFEKIESMFGIVFEIH 399

Query: 358 CERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
            ER L      ++ G +E ++  R+     G  ++ ++
Sbjct: 400 FERELSELKDMEKDGLLE-IKDRRISVLPEGRLLIRNI 436


>gi|260221067|emb|CBA29262.1| Oxygen-independent coproporphyrinogen-III oxidase [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 466

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 74/388 (19%), Positives = 155/388 (39%), Gaps = 26/388 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGT 80
           YVH PFC   C YC  N  + ++      +++    E++   +L G  +S+S +  GGG+
Sbjct: 64  YVHIPFCESLCYYCACNKIITKHHDKAATYLRYLTREVELHTKLMGTGQSVSQLHLGGGS 123

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  ++  + +N++ ++  E +IE +P +V+ +      + G NR+S GVQ  
Sbjct: 124 PTFLSDAELRELMAMLRRNFSFAAGGEYSIEVDPRTVDASRLDTLAELGFNRLSFGVQDF 183

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +    + + R   A +  A +  AR   F  ++ DLIY LP+Q+   ++  L +  +   
Sbjct: 184 DPAVQKAVHRVQPAEQVFALVEAARARGFESINVDLIYGLPRQSPESFDRTLAQVNALRP 243

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D ++LY         F    +   + LP     V +   + +     G     + + +  
Sbjct: 244 DRIALYAYAHLPE-RFKPQRRIATVELPGAASKVSMLAHSLASFMGAGYVYVGMDHFALP 302

Query: 260 G-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
                    +   + N+  Y      D I +G  A  R+     + A    K  E +   
Sbjct: 303 DDSLAIAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGRIGATYSQNA----KTLEEYYDY 358

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC------ERN 361
           + +    +V    ++ +      ++M L  +  +  +   +    +            R 
Sbjct: 359 LDQGRFPIVRGMAVTRDDLVRRAVIMALMCQGQLQFESINLAYLLDFKTYFTAELNTLRG 418

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           L+ QG +       ++ T +G   + +V
Sbjct: 419 LEEQGLVTLDDNG-IQVTSQGWFFVRAV 445


>gi|312797468|ref|YP_004030390.1| Oxygen-independent coproporphyrinogen-III oxidase [Burkholderia
           rhizoxinica HKI 454]
 gi|312169243|emb|CBW76246.1| Oxygen-independent coproporphyrinogen-III oxidase (EC 1.3.99.22)
           [Burkholderia rhizoxinica HKI 454]
          Length = 487

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 33/413 (7%)

Query: 4   LSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           + AY+  +    +    L +YVH PFC   C YC  N  + + +   ++++++   E+  
Sbjct: 62  VDAYQGAIQRSNAHGGDLSLYVHIPFCDTVCFYCGCNKVITKNRSRADSYVEALGQELAL 121

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS---SNVEITIEANPSSV 117
              L G  R I  + +GGGTP+ +    I  +++ I +++ ++    +VE +IE +P ++
Sbjct: 122 QSTLFGQGRRIRQLHWGGGTPTFLCQLQIMQLMNSIGEHFMLTPDWDDVEYSIEIDPRAI 181

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLI 176
           + +     R+ G NR+SLGVQ ++    + + R         AI  AR   +  +S DLI
Sbjct: 182 DDSTIAALRERGFNRLSLGVQDVDPLVQQAVNRVQPREMTANAIRQARESGYKSISVDLI 241

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT+  +   L   +  A D LS++  +     LF    +     LPS    + + 
Sbjct: 242 YGLPHQTVASYARTLDTIIDLAPDRLSVFAYSHLPH-LFKMQRQIDSNALPSPAQRLAIL 300

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAH 283
            L     S  G     + + +    E        +LH  N+  Y      D +GIG  + 
Sbjct: 301 QLVIERLSDAGYVYIGMDHFARPDDELAIAQRNGTLHR-NFQGYSTHADCDVLGIGASSI 359

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            R+      V    EK  E +   VR+    +     LS++ Q  + ++  L     +  
Sbjct: 360 GRIND----VYAQNEKDVERYEARVRRGELPLSRGWRLSTDDQLRQDVIGQLMCAFSVRF 415

Query: 344 KDWEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              E   G         ++E  R LQ  G +       +    RG  ++ ++ 
Sbjct: 416 AQVEATYGIRFSSYFEQELERLRALQADGLVSVDDEGIVVP-MRGRLLIRNIC 467


>gi|257463044|ref|ZP_05627446.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|317060648|ref|ZP_07925133.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313686324|gb|EFS23159.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 360

 Score =  262 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 182/368 (49%), Gaps = 22/368 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC++KC YCDF S   + +  +  ++++  TE+             +I+FGGG
Sbjct: 11  AVYIHIPFCLQKCEYCDFTSFSGKSEWKK-RYLEALRTEILLYEHSYYD----TIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+E + I+ IL    K        EIT+E NP ++       Y +AGVNR+S+G+QS
Sbjct: 66  TPSLLEGEEISEIL----KLLPHDERSEITLECNPKTLNSKKLWEYYQAGVNRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++E+ L  LGR H A EA      AR + F  +S D++++LP QT+ + + +++  LS  
Sbjct: 122 MKEKYLNLLGRLHTAEEAKEVFWKARELGFQNISVDMMFSLPTQTLKEVKEDVEEFLSLG 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L  E+ T F+   + G       ++  ++Y          G   YEISN + 
Sbjct: 182 AEHISIYSLIWEENTPFFTKLEKGIYHRTENDLEAEMYQSIIERMKQKGYEHYEISNFAK 241

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G  S HN  YW+   Y+G+G GA   +    +          E++   +        E+
Sbjct: 242 KGYISRHNQKYWKNQKYLGLGLGASGYLGKLRYTNCSDF----ETYFFQLENYRFPREEE 297

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
           E L+ E   +   ++  R      +++W    G+ ++I     L ++G++ R +    + 
Sbjct: 298 EVLTQEMIEEYRYILAFR-----QLREWVSARGKYIEICNI--LWKKGYV-RKRKQEYKI 349

Query: 379 TQRGMTML 386
           T++G+   
Sbjct: 350 TEKGLFFS 357


>gi|328944006|ref|ZP_08241471.1| coproporphyrinogen dehydrogenase [Atopobium vaginae DSM 15829]
 gi|327491975|gb|EGF23749.1| coproporphyrinogen dehydrogenase [Atopobium vaginae DSM 15829]
          Length = 419

 Score =  262 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 171/410 (41%), Gaps = 27/410 (6%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQ 64
           AY+  +  +  +   +Y+H PFC +KC YCDF S   +        +  +   ++  ++ 
Sbjct: 3   AYKQRLADKDIHE--LYLHIPFCTQKCGYCDFASWPFKSTTSVPSEYAAALKGQLNELKA 60

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                   +++ GGGTPS + P  +  I++   +     +  E + E NP S   +    
Sbjct: 61  ANVCEDTETLYIGGGTPSAL-PHELPDIIECACETCP--TLREKSCEVNPESACDDLLSH 117

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
             + G+NR+S GVQS     L+ LGR H  + A+  +   + +   +S DL+ A+P QT 
Sbjct: 118 MLRQGINRVSCGVQSTNADELKALGRTHTPARALERLCTLKAMGFSVSCDLMCAIPLQTD 177

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L   ++  VDH+S+Y LTIE+ T F+  +        SE V     ++   +  
Sbjct: 178 DSWLKSLHDVINCKVDHVSIYPLTIEQSTAFWARYAHSHPKFNSEAVQAARMDIAHDVLE 237

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           ++G   YE S+++    +  HN  YW    YIG+GP A S +   ++R    + K     
Sbjct: 238 SYGYKRYETSSYAQPNEQCDHNCGYWSARTYIGLGPSAASMLTTHAYRRLKQVWKTLPDL 297

Query: 305 LKMVRKNGHAVVEK-----------------EFLSSEQQADEFLMMGLRLREGIS---VK 344
              + +      +                  EFL+  Q   E LM+  RL  GI    + 
Sbjct: 298 PSDIARVRITCTDSRASFIRNPRLSQRKASLEFLTLPQVLAEDLMLEARLARGIEPDVIS 357

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             E + G          L   G +       L+ T +G  + + +   L 
Sbjct: 358 YAEEVLGAQALHATFDRLIDLGLMA-YNHGYLQATHKGWLLGNYIFEALL 406


>gi|220910134|ref|YP_002485445.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7425]
 gi|219866745|gb|ACL47084.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7425]
          Length = 465

 Score =  262 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 75/407 (18%), Positives = 154/407 (37%), Gaps = 32/407 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP- 68
            ++      L +Y H PFC   C +C  N+ + + K   + ++      +  + +L  P 
Sbjct: 48  AVSNYKKTPLSLYCHIPFCETACYFCGCNTVITQRKGMVDPYLDYLARNIGQLTELVDPN 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + +GGGTP+ +    +  +   IA+ +  +   EI+IE NP  ++ N   G +  
Sbjct: 108 RRVQQMHWGGGTPNYLNLGQVEHLWRTIAQRFKFADQAEISIEVNPRYLDRNYVLGLKAI 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    Q    + R    +     +   R   F  ++ DLIY LP QT+  +
Sbjct: 168 GFNRISFGIQDFNPQVQTAVNRVQPEALLFNVMDWIREAGFDSVNVDLIYGLPFQTLETF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              + + +    D ++++           +     +  LP     +++  +  +  + +G
Sbjct: 228 RETIAKTIDLNPDRIAVFNFAYVPWLKPVQRKISQE-DLPPPAEKLEILRMAIAELTHNG 286

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E         LH  N+  Y      D +G G  + S +    H V 
Sbjct: 287 YQYIGMDHFAKPEDELAVAQRQGKLHR-NFQGYTTQPESDLLGFGMTSISML----HDVY 341

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +   K    + + +      +     L+ +      ++M L  +  +S    E     + 
Sbjct: 342 VQNHKKLSDFYRAIDAGQLPIERGVSLNQDDVVRRTVIMELMCQFQLSKPALEEKYHLSF 401

Query: 355 DIEC----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           D +              L+  G IE      ++ T  G  ++ ++ +
Sbjct: 402 DCDFDDYFFAEQSELSRLEADGLIEHSPNQ-IQVTPAGRLLIRNIAS 447


>gi|167895516|ref|ZP_02482918.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 7894]
          Length = 464

 Score =  262 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|91794973|ref|YP_564624.1| coproporphyrinogen III oxidase [Shewanella denitrificans OS217]
 gi|91716975|gb|ABE56901.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           denitrificans OS217]
          Length = 446

 Score =  262 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 80/401 (19%), Positives = 167/401 (41%), Gaps = 25/401 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
             +    S +L +Y+H PFC K C YC  N  + R+    + +++   +E+     L   
Sbjct: 32  EAIKTSKSKTLSLYIHIPFCAKLCYYCGCNKVITRHAHKADQYLEYLASEIIKRAPLFKH 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ + +GGGTP+ + P  I  +   + +++  +S  E +IE +P  +E++     ++A
Sbjct: 92  YQVTQMHWGGGTPTFLTPAQILSLTALLKQHFNFASQGEFSIEIDPREIELSMLDTLKEA 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       I  A++  F   + DLIY LP QT   +
Sbjct: 152 GFNRISVGVQDFNKEVQIAVNREQDEQFIFDLIARAKDLGFVSTNVDLIYGLPLQTPASF 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              ++R +  + D LS++       + F    K  D  LP+    +D+ + T    +A G
Sbjct: 212 AKTIKRIIELSPDRLSVFNYAHLP-SRFAAQRKIKDEQLPTAQQRLDILHQTIESLTAAG 270

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 271 YQFIGMDHFAKPDDELARLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 328

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             +K  + + + +    HA+ +   L+ + +    ++  L     + +   E   G + D
Sbjct: 329 --QKELQLYYQSIDTKAHALWKGCSLTRDDEIRRIVIKQLICHFELDIASIEAELGIDFD 386

Query: 356 IE------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     +       +  +Q  R+  +  G  ++ ++ 
Sbjct: 387 AYFSEDMNLLKTFIDDKLVS-MQDRRITISATGRLLIRNIC 426


>gi|237756637|ref|ZP_04585149.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691202|gb|EEP60298.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 462

 Score =  262 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 73/405 (18%), Positives = 149/405 (36%), Gaps = 31/405 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PR 69
           + +    L +Y H PFC   C +C  N  + R K   + ++     EM   + L     R
Sbjct: 50  SNERKTPLSLYFHIPFCENACHFCGCNVIITRRKEVVKPYLDHLYKEMDLYKTLIDVNNR 109

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++  + +GGGTP+ +  +    + D I K + +    EI+IE +P  V+ +     RK G
Sbjct: 110 NVVQLHWGGGTPNYLSDEETVELFDEIKKRFQIDEKAEISIEIDPRHVDRDRIFLLRKVG 169

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR S G+Q    +    + R          +   R   F  ++ DLIY LP QT+  + 
Sbjct: 170 FNRASFGIQDFNPKVQEAVNRIQPEEMIFNVMKWFREAGFESVNIDLIYGLPYQTLETFS 229

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHG 247
             + + +    D ++++           ++ ++ D   LP     + +  +T    +  G
Sbjct: 230 DTIDKTIKLNPDRIAVFNFAYVP--WLKRLQRNIDEKTLPPPEEKLKILQMTIEKLTKAG 287

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      +  G G  + S +    +   
Sbjct: 288 YVFIGMDHFAKPNDELAIAQRERTLHR-NFQGYTTKAEAELFGFGATSISML----YDAY 342

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +   K    + + V      +    +L+ +      ++M L     +   + E       
Sbjct: 343 VQNYKVLRDYYEPVENGQLPIERGVYLTQDDIIRREVIMKLMCHFRLIKSEIEEKFNIKF 402

Query: 355 DIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           D   ++ L      +  G +      R+     G  ++ ++ +  
Sbjct: 403 DEYFKQELESLKEMEEDGLLTLY-PDRIDVLPIGRLLIRNIASTF 446


>gi|239815800|ref|YP_002944710.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
 gi|239802377|gb|ACS19444.1| oxygen-independent coproporphyrinogen III oxidase [Variovorax
           paradoxus S110]
          Length = 470

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 81/411 (19%), Positives = 151/411 (36%), Gaps = 31/411 (7%)

Query: 2   KYLSAY-ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +Y +A  E    G  +  L +YVH PFC   C YC  N  V R+      ++     E +
Sbjct: 49  EYAAALRERRDAGASAAPLSLYVHIPFCESLCYYCACNKVVTRHHERATQYLAYLARETR 108

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                 G R+ +S +  GGGTP+ +    +  +L  + +++      E +IE +P +V+ 
Sbjct: 109 LQAAQLGRRAAVSQLHLGGGTPTFLSDAELGELLAMLRESFDFVPGGEWSIEIDPRTVDA 168

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
                    G NR+S GVQ  + +  + + R   A +    +  AR   F  ++ DLIY 
Sbjct: 169 ARLASLATLGFNRLSFGVQDFDPEVQKAVHRIQPAHQVFGLMADARALGFKSINADLIYG 228

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP+Q    +E  + +      D ++LY         F    +     LP     V + + 
Sbjct: 229 LPRQNDRSFERTMAQVCELRPDRIALYAYAHLPE-RFKPQRRIAADELPDAAARVRMLSR 287

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRV 286
             +  S  G     + + +           +     ++  Y     GD + +G  A  R+
Sbjct: 288 AIATLSDAGYVYIGMDHFALPDDPLAVAKRQGRLQRDFQGYSTQPEGDLVALGVSAIGRI 347

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK-- 344
                + A    K  +++  ++ +    VV    LS +      ++M +  R  +     
Sbjct: 348 GASYSQNA----KTLDTYYDLLGQGRLPVVRGLALSRDDVLRRAVIMAVMCRGRVVFDAI 403

Query: 345 ------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 D+               L  QG +       +  T  G  ++ ++
Sbjct: 404 GEAHRIDFRHYFAAEF--AALGPLVAQGLVRVSDHD-IEVTAEGWFVVRAI 451


>gi|167739810|ref|ZP_02412584.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 14]
 gi|167912162|ref|ZP_02499253.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 112]
          Length = 464

 Score =  262 bits (670), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|33861867|ref|NP_893428.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|33640235|emb|CAE19770.1| Oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 408

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 119/402 (29%), Positives = 203/402 (50%), Gaps = 31/402 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENF----IQSFLTEM-QWMRQLTGPRSI 71
               YVH PFC ++C YCDF       K+   E +    ++ +LT + + +  +     +
Sbjct: 6   PRSAYVHIPFCHRRCFYCDFAVIPLGNKIESLEGYGSKTVKEYLTYLNKEILSIKHKSPL 65

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+I+ GGGTPS++ P  I  +++   +N+ +    EIT+E +P+S   ++  G+ KAG+N
Sbjct: 66  STIYIGGGTPSILNPLQIKDLINLFKENYKIDYGAEITMEVDPASFNEDDLYGFIKAGIN 125

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIA---AIHLARNIFP--RMSFDLIYALPKQTMTQ 186
           R SLGVQS   Q L   GR H + +       +  A N       S DLI  LP+    +
Sbjct: 126 RFSLGVQSFNNQVLEQAGRRHCSKDVEKSCFWLKRAYNHGFIKSWSLDLIQNLPRSGFKE 185

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L+++L +   H+S+Y L+IE GT+F K+   G L LP ++ A     LT  I  A 
Sbjct: 186 WQEDLKQSLKFFPPHISIYDLSIENGTVFKKLVDLGKLSLPKDDDAFKNSELTNFILKAS 245

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL- 305
           G   YEISN+S  G +S HN  YW+   +   G G+ S    G +     I K  + W+ 
Sbjct: 246 GYSRYEISNYSIPGHQSRHNRVYWKGLGWWSFGQGSTSS-PWGENFTRPRISKDYKKWVT 304

Query: 306 -KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--------- 355
            +   K  H+++ +E +  E   DE +M+G+RL+EGI++  + +L  +N D         
Sbjct: 305 KQCEIKLEHSLINQENIYKE--LDEKIMLGMRLKEGINI--YNLLNEQNWDNKKSKIALK 360

Query: 356 --IECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
             ++        G + + + +R   +  +GM + + ++ ++ 
Sbjct: 361 KLLKAWEPFLESGLLIK-RGNRFFLSDPKGMELSNQILVSMF 401


>gi|53720256|ref|YP_109242.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei K96243]
 gi|167817033|ref|ZP_02448713.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 91]
 gi|52210670|emb|CAH36654.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei K96243]
          Length = 464

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPNVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|123966705|ref|YP_001011786.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9515]
 gi|123201071|gb|ABM72679.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9515]
          Length = 407

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 118/401 (29%), Positives = 196/401 (48%), Gaps = 29/401 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEM-QWMRQLTGPRSI 71
               YVH PFC ++C YCDF        +        N ++ +LT + + +  +     +
Sbjct: 5   PRSAYVHIPFCHRRCFYCDFAVVPLGNNIESLNGYGSNTVKEYLTYLDKEILSIKHKTPL 64

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S+I+FGGGTPS+++P  I  +++   +N+ +    EIT+E +P+S    +  G+ KAG+N
Sbjct: 65  STIYFGGGTPSILDPIQIEHLINLFKENYRIDYGAEITMEVDPASFNEGDLHGFIKAGIN 124

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIA---AIHLARNIF--PRMSFDLIYALPKQTMTQ 186
           R SLG QS   Q L   GR H   +       +  A +       S DLI  LP     +
Sbjct: 125 RFSLGAQSFNNQILDQAGRRHCGEDVEKSCSWLKRAHDYGLIKSWSLDLIQNLPSSGFKE 184

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W+ +L+++L +   H+S+Y L+IE GT+F K+   G L LP+++ +     LT  I  A 
Sbjct: 185 WQEDLEKSLKFCPPHISIYDLSIENGTVFKKLVDLGKLSLPNDDESFKNSELTHFILKAS 244

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   YEISN++  G +S HN  YW    +   G G+ S    G       I K  + W+ 
Sbjct: 245 GYSRYEISNYALPGHQSRHNRVYWTGLGWWSFGQGSTSS-PWGEKFTRPRISKDYKKWVA 303

Query: 307 MVRKNGH--AVVEKEFLSSEQQADEFLMMGLRLREGISV----------KDWEMLAGRNL 354
              +     ++  KE +  E   DE +M+G+RL+EG+++          K    +A + L
Sbjct: 304 EQCEIKLETSLENKENIYKE--LDEKIMLGMRLKEGVNIYKLINEHNWDKKKSEIALKKL 361

Query: 355 DIECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
             E ER L+    I+R   +R   +  +GM + + ++ ++ 
Sbjct: 362 LKEWERFLESGLLIKR--GNRFFLSDPKGMELSNQILVSMF 400


>gi|269303256|gb|ACZ33356.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila pneumoniae LPCoLN]
          Length = 373

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 105/382 (27%), Positives = 187/382 (48%), Gaps = 17/382 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISS 73
           G + L +Y+H PFC KKC YC F +   + +     +  + +   ++ +  +     + +
Sbjct: 3   GKSPLALYIHIPFCTKKCRYCSFYTIPYKSES-VSLYCNAVIQEGLRKLAPIQETHFVET 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTPSL+   ++  IL  +A +       EIT+EANP ++  +  +  ++  +NRI
Sbjct: 62  VFFGGGTPSLVSHLDLKRILKELAPHAQ-----EITLEANPENLTASYLRQLQETPINRI 116

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ+ ++  L+ LGR H++S AI A+    N  F  +S DLIY LP Q++  +  +L 
Sbjct: 117 SVGVQTFDDSILQLLGRTHSSSVAITALQECHNHGFSNLSIDLIYGLPTQSLEIFLSDLH 176

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +AL+  + H+SLY LTI+  T FYK  K     +  E +  ++  L +++  + G   YE
Sbjct: 177 QALTLPITHISLYNLTIDPHTSFYKHRKILVPTIAQEEILAEMSLLAENLLLSQGFQRYE 236

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +++++  G  + HNL YW    ++G+G  A   +     +    I      +L+ VRKN 
Sbjct: 237 LASYAKPGYPAKHNLYYWTDRPFLGLGVSASQYLHGERSKNYSRIS----HYLRAVRKNL 292

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
                 E L  +++  E     L LR  +    +       L     ++++ Q     V 
Sbjct: 293 PTQETSEILPEKERIKE----ALALRLRLLGGAYLAEFPSTLISMLTQDVKLQNLFS-VH 347

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
              L   ++G    D++   + 
Sbjct: 348 GQFLTLNRQGRLFHDTIAEEIM 369


>gi|126438510|ref|YP_001060073.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 668]
 gi|126218003|gb|ABN81509.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 668]
          Length = 464

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 HAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|161525646|ref|YP_001580658.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|160343075|gb|ABX16161.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
          Length = 482

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 86/418 (20%), Positives = 155/418 (37%), Gaps = 38/418 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N            ++     E+  
Sbjct: 61  DYVRAASD--PGASSSELSLYFHIPFCNTACFYCGCNRIATNNHRRARPYLDQLKREIAL 118

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L    R+++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 119 QATLFDRSRAVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVT 178

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  R  G NR+SLGVQ  + +    + R    ++    +  AR   F   S DLIY
Sbjct: 179 PATLVHLRTIGFNRLSLGVQDFDPEVQCAINRIQPLAQTADLLRAARTTGFHSTSVDLIY 238

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 239 GLPHQTVATFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRRIDDATLPPPETRIALLG 297

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 298 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLIGIGVSSIGK 357

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 358 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTADDRLRRDVIAQLMCNLELPFSP 413

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
                   +     R LD    R  +R G +        R T    G  ++ ++    
Sbjct: 414 IEAAHGIRFADRFARELD--ALRPFERDGLLTIAAD---RLTIHSPGRMVVRNIAMAF 466


>gi|254298930|ref|ZP_04966380.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
 gi|157809112|gb|EDO86282.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 406e]
          Length = 464

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 HAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|167924609|ref|ZP_02511700.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei BCC215]
          Length = 464

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/412 (21%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LSS+ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSSDDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|76811520|ref|YP_334494.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1710b]
 gi|126455007|ref|YP_001067334.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 1106a]
 gi|134280231|ref|ZP_01766942.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
 gi|167846934|ref|ZP_02472442.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei B7210]
 gi|237813465|ref|YP_002897916.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
 gi|242316333|ref|ZP_04815349.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
 gi|254180957|ref|ZP_04887555.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
 gi|254191800|ref|ZP_04898303.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196022|ref|ZP_04902447.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
 gi|254258876|ref|ZP_04949930.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
 gi|76580973|gb|ABA50448.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710b]
 gi|126228649|gb|ABN92189.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106a]
 gi|134248238|gb|EBA48321.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 305]
 gi|157939471|gb|EDO95141.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169652766|gb|EDS85459.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei S13]
 gi|184211496|gb|EDU08539.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1655]
 gi|237503490|gb|ACQ95808.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei MSHR346]
 gi|242139572|gb|EES25974.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1106b]
 gi|254217565|gb|EET06949.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei 1710a]
          Length = 464

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 HAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|114320528|ref|YP_742211.1| oxygen-independent coproporphyrinogen III oxidase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226922|gb|ABI56721.1| oxygen-independent coproporphyrinogen III oxidase [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 478

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 85/400 (21%), Positives = 157/400 (39%), Gaps = 28/400 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSI 74
              L +YVH PFC   C YC  N  +         ++     E+    QL    R +  +
Sbjct: 68  PRPLSLYVHVPFCDTVCFYCACNKIITGNYSRAGTYLDYLEKEVALQSQLFDADRRVEQL 127

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            FGGGTP+ +  +++  ++D +++ +T+      E +IE +P +V     +   K G NR
Sbjct: 128 HFGGGTPTYLSDEDLIRVMDMLSRYFTLERGPQREFSIEIDPRAVRETTIELLAKLGFNR 187

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQ  +    + + R          I  AR   F   + DLIY LP Q++  +   L
Sbjct: 188 MSVGVQDFDPAVQKAVNRIQPYETTARVIAKARSCGFRSTNLDLIYGLPLQSVETYSRTL 247

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + L    + L++Y        LF    +  +  LP  +  + +  LT    +  G    
Sbjct: 248 DQTLELRPERLAVYNYAHLPH-LFKVQRQIREEQLPGPDEKLAILELTIRRLTEAGYVYI 306

Query: 252 EISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
            + + +    E        +LH  N+  Y      D +G+G  +  +V     +      
Sbjct: 307 GMDHFALPEDELAQAQRAGTLHR-NFQGYSTRAECDLVGLGVTSIGKVGESYSQNL---- 361

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +  E++   + +    V     LS++ Q    ++  +     +  ++ E     +     
Sbjct: 362 RDMEAYYARLDEGRLPVFRGVELSADDQLRRDVITEIMCHSRVDFREMEERYQIHFRDYF 421

Query: 359 ERNLQR-QGF----IERVQFSRLRCTQRGMTMLDSVIANL 393
              L+R QG     + R++  RL+   RG  +L  V    
Sbjct: 422 RDALERLQGMESDGLVRIESDRLQVLPRGRLLLRHVAMAF 461


>gi|154249903|ref|YP_001410728.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fervidobacterium nodosum Rt17-B1]
 gi|154153839|gb|ABS61071.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fervidobacterium nodosum Rt17-B1]
          Length = 370

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/376 (27%), Positives = 172/376 (45%), Gaps = 22/376 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+YVH PFC K+C YCDF S+V       + + +  L E+   ++      I +++ GG
Sbjct: 9   LGLYVHIPFCKKRCIYCDFVSYVENN---FDEYTEYLLNEIDLYKEYLNS-GIDTLYIGG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+   +NI+ I + +     +S+N EITIE NP S    N Q Y+K GVNRIS+G+Q
Sbjct: 65  GTPSIFPIKNISKIFEKLEPY--ISNNAEITIEVNPESFTKENAQFYKKIGVNRISMGLQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+  GR ++    I    +A+  F  ++ D I  LP ++ +     +Q    + 
Sbjct: 123 SADDVVLKKSGRLYDFETFIRKFDIAKRYFDNINVDFIIGLPGESWSTIGKNVQFISDFL 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S+Y L +          K+  ++   ++     Y+   +  S  G   YEISN + 
Sbjct: 183 PDHISVYMLEVHND-------KNNSVLKKPDDQTFQRYDDFLNAISGFGYERYEISNFAL 235

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G    HNL YW   DY+G+G  A   +    +    S       +   + +       +
Sbjct: 236 NGKYCKHNLKYWANTDYVGLGISAGGHIGFLRYNNHESFS----DYFISISEGKFPRAYE 291

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
              + E++A E   M LR   G+  +  +     N+DI    +  +  F     F   + 
Sbjct: 292 SLNTPEREALETTFMNLRTMLGVDKEYIKEKT--NIDISPVMDALKNKF---DFFDGKKL 346

Query: 379 TQRGMTMLDSVIANLA 394
           +++GM   +     L 
Sbjct: 347 SEKGMDFSNLFFVTLL 362


>gi|325474037|gb|EGC77225.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           denticola F0402]
          Length = 390

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 105/395 (26%), Positives = 184/395 (46%), Gaps = 36/395 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH-VRRYK----VGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G+Y+H PFC++KC YCDF S    R+K         F+     +++            ++
Sbjct: 5   GLYIHIPFCLQKCNYCDFFSVRAGRFKNILSGHLSPFVLRLAEDIKIQADKYSINEWDTV 64

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+ P ++  +   I      + + E T+E NP  +  +        G+NR S
Sbjct: 65  YIGGGTPSLLSPDDLYYLSSQIPAAQK-NPHREFTVEINPEDLTKDFLSAAVSGGINRFS 123

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL ++ L    R      +++A+ L R      +S DLI  L KQT    + ++Q 
Sbjct: 124 VGIQSLNDEVLSACKRRGCRKMSLSALELLRSQKGLILSCDLIAGLDKQTSDILKDDIQT 183

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L +  +H SLY L             +  +    ++   +L++  + I   +  + YE+
Sbjct: 184 LLHFKPEHFSLYALC-----------SNIKVRPEKDDEIAELWSYGKDILEKNSYNKYEV 232

Query: 254 SNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRV---------KVGSHRVAISIEKHPES 303
           SN S+    +S+HN  YWR  DYIG+GPGA   +            ++ +  S  K+ E 
Sbjct: 233 SNFSYKNLYKSIHNEKYWRLEDYIGVGPGAFGSIFFDKDALPSHAHANALRFSAIKNIEK 292

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W+ +  KN   V E E +  ++  +E  MMGLRL EGI    ++   G+++ +   + + 
Sbjct: 293 WMTL--KNRDEVYEYETIDEKEFIEEAFMMGLRLTEGIDRSFFKSRFGKDISVFAGKTIS 350

Query: 364 RQGFIERVQ----FSRLRCTQRGMTMLDSVIANLA 394
           +  +++R +      R   T++G   L+  +  L 
Sbjct: 351 K--WLDRNEAVLTEKRFYLTEKGFLYLNLFLQELF 383


>gi|254425837|ref|ZP_05039554.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. PCC 7335]
 gi|196188260|gb|EDX83225.1| oxygen-independent coproporphyrinogen III oxidase [Synechococcus
           sp. PCC 7335]
          Length = 474

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 72/403 (17%), Positives = 156/403 (38%), Gaps = 29/403 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
                 + +Y H PFC   C +C  N+ + + K   + ++ + +  ++ +  L+ P R +
Sbjct: 51  NYQQTPISLYCHLPFCNSACYFCGCNTIITQNKAVVDPYLAALIGNIEQVAALSDPQRVV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + +GGGTP+ +  +    ++  + K ++ + + EI+IE +P  +  +   G R  G N
Sbjct: 111 NQMHWGGGTPNYLSLEQAHRLMQKLKKRFSFADDAEISIEVSPRYLTRDYVLGLRLLGFN 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+Q    Q    + R  +       +   R   F  ++ D IY LP QT+  +   
Sbjct: 171 RISFGIQDFNPQVQTAINRPQSEEMLFQVMSWIREARFQSVNVDFIYGLPYQTLETFHNT 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ L    D ++++        L  +     +  LP+    +D+ +++    +A G   
Sbjct: 231 IRKTLMLNPDRIAIFNFAYLPHLLPIQRKHIDERTLPAAAEKLDILHMSIDELTAGGYQF 290

Query: 251 YEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +           E   + N+  Y      D    G  A S     +  +     
Sbjct: 291 IGMDHFAKPNDELTLAQNEGRLHRNFQGYTTQPEADLFAFGMTAISM----AQHIYTQNH 346

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K  + +   +  N   +     LS + +    ++M L  +  +S    E     + D + 
Sbjct: 347 KQLKDFSASISANTLPLKRGLVLSHDDRLRRAVIMELMCQFELSKSALEEKYHLSFDQDF 406

Query: 359 ----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                        L   G +     + ++ T  G  ++ ++ A
Sbjct: 407 DDYFAHERQDLEALSTDGLVSLT-PNHIQVTPSGRLLIRNIAA 448


>gi|171911723|ref|ZP_02927193.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Verrucomicrobium spinosum DSM 4136]
          Length = 341

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 177/348 (50%), Gaps = 15/348 (4%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--E 107
            F+++ L E++   Q T P +  +I+ GGGTP+ +  +++A +L G+ +    S +V  E
Sbjct: 3   AFVKAVLRELELH-QRTMPVTARTIYLGGGTPTALSEKHLADLLTGLKEAAAASGSVLDE 61

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             +EANP +V  +  +  ++ GV RISLGVQ+ +E +L+ LGR+H   EA     + R  
Sbjct: 62  FGLEANPKTVSASKARLLKELGVTRISLGVQAWDEPTLKLLGRDHAPDEAAETFQILREA 121

Query: 168 F-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
             P ++ DL++++P QT+  W   L++ LS   DH+S Y LT E+ T F    + G L  
Sbjct: 122 GIPSLNVDLMFSIPGQTLKVWNAGLEKTLSLGSDHVSCYNLTYEEDTEFLSQLQAGVLD- 180

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
             E+   D +  T  I  A G   YEISN++  G  S+HN  YWR  DY+G+GP A S V
Sbjct: 181 TDEDRDADHFQSTMDILEAAGFEHYEISNYARPGHRSVHNQAYWRGADYLGLGPSASSTV 240

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    RV          ++++V++    + E E LS  Q   E + + LR  EG+S +  
Sbjct: 241 Q----RVRWKNISDTAGYIRLVQEGRLPITESEELSDRQWLIERVALELRTAEGMSRERV 296

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                     E    L  +G +     SR+  T+ G  + D +   L 
Sbjct: 297 A-----PSQTEALTMLVTEGLVTATA-SRVILTRAGKALSDRIAEQLL 338


>gi|167825444|ref|ZP_02456915.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei 9]
 gi|226193908|ref|ZP_03789510.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
 gi|225934213|gb|EEH30198.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           pseudomallei Pakistan 9]
          Length = 464

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNVETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPNVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDTAALPPPTTRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|319941404|ref|ZP_08015732.1| oxygen-independent coproporphyrinogen III oxidase [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805024|gb|EFW01854.1| oxygen-independent coproporphyrinogen III oxidase [Sutterella
           wadsworthensis 3_1_45B]
          Length = 467

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/413 (21%), Positives = 156/413 (37%), Gaps = 27/413 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y  A     T +    L +YVH PFC   C YC  N  V R       +I     E   
Sbjct: 44  DYARALAGRGTAKEPAPLSLYVHVPFCNDVCFYCGCNKIVTRDHSRSAAYIDLIGQEADL 103

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEV 119
           +   LTG + +  + FGGGTP+ +    + L++D + K + ++    E +IE +P +   
Sbjct: 104 VKAHLTGSQELEQLHFGGGTPTFLTEDELELMMDTLTKRFPLAKTGGEFSIEVDPRTCGP 163

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
           +  +  R+ G+NR+SLGVQ       + + R          +  AR   F  ++ DLIY 
Sbjct: 164 SKVKKLREIGLNRMSLGVQDFNPDVQKAVNRIQPFEMTKETMDAARAEGFHSINMDLIYG 223

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQT   +   + + L  + D ++LY         F    +     LP     V +   
Sbjct: 224 LPKQTRETFAQTIDQVLELSPDRIALYHYAHLPN-HFKPQRRILPADLPDTVTKVHIMFD 282

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-SLHNL------NYWRYG-----DYIGIGPGAHSRV 286
                +A+G     + + + +  E S   +      N+  Y      D + +G  + S++
Sbjct: 283 AIKRLTANGYRYIGMDHFAKIDDELSRAQIEGTLQRNFQGYSTKAECDMVALGVSSISKI 342

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       +  + W   +++   A      L+ + +   +++M +     +  KD 
Sbjct: 343 GSAYACN----PRELDDWAAAIKEGRLATNRGYHLNEDDELRRYVIMKIMCNFELKKKDV 398

Query: 347 EMLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E   G + D          +       +E     RL    +G   + +V    
Sbjct: 399 EDKFGIHFDEVFAYELGKMKPYVHHDLVELY-PDRLVVLPKGKIFVRAVAMQF 450


>gi|163857399|ref|YP_001631697.1| coproporphyrinogen III oxidase [Bordetella petrii DSM 12804]
 gi|163261127|emb|CAP43429.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella
           petrii]
          Length = 473

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 150/409 (36%), Gaps = 27/409 (6%)

Query: 2   KYLSAYE-NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +Y  A            +L +YVH PFC   C YC  N  + R+      ++ +   EM 
Sbjct: 50  QYRQALSCRAQEADARGALSLYVHIPFCESLCYYCACNKVITRHHERAARYLDALQREMA 109

Query: 61  WMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              +L G  + +S + FGGGTP+ +    +  ++  +  ++ +  + EI++E +P +   
Sbjct: 110 LHSELVGRGQPVSQLHFGGGTPTFLSDAELDGLMAALRSHFHLLPDAEISVEVDPRTATA 169

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
                    G NR+SLGVQ  +    R + R  +       +H AR +    ++ DLIY 
Sbjct: 170 ERLAHLAGLGFNRLSLGVQDFDPAVQRAVHRIQSYESVRDLMHSARELGYASVNMDLIYG 229

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT   +   L++      D ++LY         F    +     LP     V L   
Sbjct: 230 LPLQTAESFARTLEQVCGLRPDRIALYGYAHLPE-RFKAQRRILPAELPDGETRVALLGS 288

Query: 239 TQSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYG-----DYIGIGPGAHSRV 286
             +     G     + + +               + N+  Y      D I +G  A  RV
Sbjct: 289 AIARFLEAGYDYIGMDHFALHDDALAQAKRAGRLHRNFQGYSTQPDRDLIALGVSAIGRV 348

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                + A    K  + +   + +   AV     +S++      ++M +  + G+  +  
Sbjct: 349 GATYSQNA----KTLDDYYACIEQGEFAVERGLAMSADDLLRRDVIMAIMCQGGLDFRAI 404

Query: 347 EMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
           E   G   +      LQ        G +       L+ +  G   + +V
Sbjct: 405 EQAHGIAFESYFAEELQALQSLAGMGLVHCRPNG-LQVSDLGWYFVRAV 452


>gi|330752380|emb|CBL87332.1| oxygen-independent coproporphyrinogen III oxidase [uncultured
           Sphingobacteria bacterium]
 gi|330752506|emb|CBL87454.1| oxygen-independent coproporphyrinogen III oxidase [uncultured
           Sphingobacteria bacterium]
          Length = 375

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 183/381 (48%), Gaps = 19/381 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGG 78
           GVY+H PFC + C YC+F     +      +FI + + E++   +  G  R I SI+FGG
Sbjct: 9   GVYIHVPFCQQACSYCNFYFVTGQRD--HTDFITAAIREIKESSEFFGEDRIIHSIYFGG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  IL+ +   +TVS++ EIT+EANP  +  +    +   GVNRISLG+Q
Sbjct: 67  GTPSRLTLKELESILNQVHSIFTVSTDAEITLEANPEDITKDIVNAWFNLGVNRISLGIQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L  + R H+  EA+ A  + +   F   SFDLI     Q +     +L+   S+
Sbjct: 127 SFNDKLLALMRRAHDGKEALHAASIIKQSSFRNFSFDLIIGQIHQDLEMLNQDLRYLESF 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              HLS Y LT+E+ T  +K  +   L   ++    + Y              YE S+ +
Sbjct: 187 KPPHLSTYLLTVEEKTHLHKEIQRKRLPDVADRTQEEHYLHLMKWAQEWKYTHYETSSFT 246

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + HN NYW +  Y+GIGP AHS      +  + ++ ++  S          A  +
Sbjct: 247 LDGYHARHNANYWNHSPYLGIGPSAHSFDGKKRYWNSRNLNEYIAS--------ATASRK 298

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKD--WEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           +E LS     +E +M+GLR  +GI +       +  R LD    ++LQ    +     SR
Sbjct: 299 EECLSRIDFINEKIMLGLRQSKGIVIDHLGLSEIERRALD----KSLQAVNPLHIEYDSR 354

Query: 376 -LRCTQRGMTMLDSVIANLAV 395
            +R +  G    D + + L +
Sbjct: 355 NIRLSNEGKLYADGIASTLFL 375


>gi|189349628|ref|YP_001945256.1| coproporphyrinogen III oxidase [Burkholderia multivorans ATCC
           17616]
 gi|189333650|dbj|BAG42720.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           multivorans ATCC 17616]
          Length = 463

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 86/418 (20%), Positives = 155/418 (37%), Gaps = 38/418 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  S+ L +Y H PFC   C YC  N            ++     E+  
Sbjct: 42  DYVRAASD--PGASSSELSLYFHIPFCNTACFYCGCNRIATNNHRRARPYLDQLKREIAL 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVE 118
              L    R+++ + +GGGTP+ +     A ++    +++ ++   + E +IE +P +V 
Sbjct: 100 QATLFDRSRAVTQLHWGGGTPTFLSDDETAELMAATREHFLLAPDADAEYSIEIDPRTVT 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  R  G NR+SLGVQ  + +    + R    ++    +  AR   F   S DLIY
Sbjct: 160 PATLVHLRTIGFNRLSLGVQDFDPEVQCAINRIQPLAQTADLLRAARTTGFHSTSVDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L+  +  A D LS++        LF    +  D  LP     + L  
Sbjct: 220 GLPHQTVATFARTLETIIELAPDRLSVFGYAHMPH-LFKMQRRIDDATLPPPETRIALLG 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L   + ++ G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 279 LAIDMLTSAGYVYIGMDHFARPSDELVRAQRNGTLQRNFQGYSTRADTDLIGIGVSSIGK 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           V     + A    K   ++   +      +     L+++ +    ++  L     +    
Sbjct: 339 VGDVYAQNA----KDLPAYGAALDAGRLPIARGVRLTADDRLRRDVIAQLMCNLELPFSP 394

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT--QRGMTMLDSVIANL 393
                   +     R LD    R  +R G +        R T    G  ++ ++    
Sbjct: 395 IEAAHGIRFADRFARELD--ALRPFERDGLLTIAAD---RLTIHSPGRMVVRNIAMAF 447


>gi|167837568|ref|ZP_02464451.1| coproporphyrinogen III oxidase [Burkholderia thailandensis MSMB43]
          Length = 464

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 87/410 (21%), Positives = 151/410 (36%), Gaps = 30/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++      +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAEATELMAATRDYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +S DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSISIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHMPH-LFKMQRQIDGAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARTGDELVRAQRNGTLQRNFQGYSTQADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +V    LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIVRGVTLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
            E   G     +  R L      +R G +  +    L     G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGMLS-IGADHLTIHPAGRLYVRNI 444


>gi|119470396|ref|ZP_01613124.1| coproporphyrinogen III oxidase [Alteromonadales bacterium TW-7]
 gi|119446321|gb|EAW27597.1| coproporphyrinogen III oxidase [Alteromonadales bacterium TW-7]
          Length = 457

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 83/401 (20%), Positives = 167/401 (41%), Gaps = 30/401 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             +SA E++     S SL +YVH PFC + C YC  N  + R++   + +I     E+  
Sbjct: 39  DLISAVESS----QSRSLSLYVHIPFCSQLCYYCGCNKIITRHQSKADTYIDFLAKEIAA 94

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L    S+  +  GGGTP+ + PQ +  ++  + +++  +S  E  IE +P S+  N 
Sbjct: 95  QAPLFKHYSVEQLHLGGGTPTFLTPQQMKRLITLLEQHFNFTSTTERGIEVDPRSLAENM 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
               R  G NR+S G+Q   +     + R  +A      I  AR   F  ++ D+IY LP
Sbjct: 155 LVDLRMLGFNRVSFGIQDFNDDVQLAVNRPQHADTVKQLITQARELGFKSINADMIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   ++  +++ +  + D +S++         F    K  +  LP+ +  + ++  T 
Sbjct: 215 LQTPESFKQTIEQLIELSPDRVSVFNYAHLPE-RFAAQRKIKEHDLPNAHDKLTMFKNTL 273

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
              +  G     + + +    E         LH  N+  Y      D +G+G  + S++ 
Sbjct: 274 EQMTQAGYQFIGMDHFAKADNELAIAQNEGKLHR-NFQGYTTHGNCDLLGLGASSISQIG 332

Query: 288 VGSHRVAISIEKHPESWLKMVR-KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                  +  +K  + +   +  ++G A+ +   L+ +       +  L  +  ++++++
Sbjct: 333 TA----ILQNKKELKHYYHSIETQSGCALSKGMHLTHDDVIRADAIKQLICQFELNIEEF 388

Query: 347 EMLAGRNLDIECERNLQR-QGFIER----VQFSRLRCTQRG 382
                   D      L   +  I+     ++ + +  T RG
Sbjct: 389 AKKYHIEFDTYFAEALVSLKPLIDDNMVIIENNHVSVTPRG 429


>gi|291280403|ref|YP_003497238.1| oxygen-independent coproporphyrinogen III oxidase [Deferribacter
           desulfuricans SSM1]
 gi|290755105|dbj|BAI81482.1| oxygen-independent coproporphyrinogen III oxidase [Deferribacter
           desulfuricans SSM1]
          Length = 356

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 104/372 (27%), Positives = 172/372 (46%), Gaps = 26/372 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y+H PFC  KC YC F S         +N++ +   E+             +I+ GG
Sbjct: 2   LGLYIHIPFCKSKCKYCGFFSISNFDTDIVKNYLHAIEKELSVYTDYL----FDTIYIGG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS+++   +  +L  I K   +    E T EANP S++    +  +  GV+RIS+GVQ
Sbjct: 58  GTPSVLDYDELENLLKAIQKL-NLKKLKEFTFEANPESIDETKIKILKDCGVSRISIGVQ 116

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+   L+FLGR H   +    I+  +      + D+I+ +P  +  +    L +     
Sbjct: 117 SLDNNVLQFLGRIHQVKDVYTCIYFLKKHNFNFNVDVIFDIPTVSYKKIYNTLTKLCDLN 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y  +          +    L     ++   L           G H YEISN + 
Sbjct: 177 PNHISAYSYS----------YDTAFLSEYKGDMKSHLIE-IVDFLKDRGYHRYEISNFAK 225

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
            G ESLHN+ YW+ GD+IG+G  AHS   + + RV  S     + ++    +N       
Sbjct: 226 KGYESLHNITYWKMGDFIGVGAAAHSMKNLKNCRVRYSHPAEVKRYI----ENSFCFDNI 281

Query: 319 EFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           E +   ++   E L+ GLRL  G+ ++ ++ L   +L       L ++G++E  +  R+ 
Sbjct: 282 EIIRDEKEILLENLVFGLRLTSGVELEIFKKLDILDLLSY----LIKKGYLENNE-DRVC 336

Query: 378 CTQRGMTMLDSV 389
            T++G   LD V
Sbjct: 337 LTKKGTLFLDYV 348


>gi|315125379|ref|YP_004067382.1| coproporphyrinogen III oxidase [Pseudoalteromonas sp. SM9913]
 gi|315013892|gb|ADT67230.1| coproporphyrinogen III oxidase [Pseudoalteromonas sp. SM9913]
          Length = 457

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 162/400 (40%), Gaps = 28/400 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             +SA E++ T     SL +Y+H PFC + C YC  N  + R++   + ++     E+  
Sbjct: 39  DLISAIESSQT----RSLSLYIHIPFCSQLCYYCGCNKVITRHQSKADTYLDFLAKEIAA 94

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L     +  +  GGGTP+ +    +  ++  + +++  S   E  IE +P S+  N 
Sbjct: 95  QAPLFQDYRVEQLHLGGGTPTFLTAAQMTRLVTLLEQHFNFSDTCERGIEIDPRSLADNM 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
                + G NR+S G+Q   +Q    + R  +  E    I  A+   F  ++ D+IY LP
Sbjct: 155 LVDLSELGFNRVSFGIQDFNDQVQLAVNRPQHVDEVKQLITQAKQLGFKSINADMIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +   +++ ++   D +S++         F    K  D  LPS +  + ++  T 
Sbjct: 215 LQTPESFTQTIEQLIALNPDRVSVFNYAHLPE-RFAAQRKIKDADLPSAHNKLTMFKNTL 273

Query: 241 SITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
              +  G     + + + +  E       +  + N+  Y      D +G+G  + S++  
Sbjct: 274 EQMTQAGYQFIGMDHFAKVDNELAIAQNTNQLHRNFQGYTTHGECDLLGLGVSSISQIGT 333

Query: 289 GSHRVAISIEKHPESWLKMVRKN-GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                 +  +K  + + + V +  G A+ +   L+ +       +  L  +  + +  + 
Sbjct: 334 A----ILQNKKELKHYYQAVDEQAGSAINKGMHLTQDDLIRADAIKQLICQFELDMSVFA 389

Query: 348 MLAGRNLDIECERNLQRQG-FI----ERVQFSRLRCTQRG 382
                + +   +  L+     I      ++ + +  T +G
Sbjct: 390 NRHKISFNDYFQDALEALAPLIADEMVTIENNLISVTPKG 429


>gi|53725897|ref|YP_103737.1| coproporphyrinogen III oxidase [Burkholderia mallei ATCC 23344]
 gi|67643998|ref|ZP_00442741.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|121601330|ref|YP_992084.1| coproporphyrinogen III oxidase [Burkholderia mallei SAVP1]
 gi|124385408|ref|YP_001028529.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10229]
 gi|126450535|ref|YP_001081573.1| coproporphyrinogen III oxidase [Burkholderia mallei NCTC 10247]
 gi|166998379|ref|ZP_02264239.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
 gi|217421130|ref|ZP_03452635.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|254175481|ref|ZP_04882141.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
 gi|254202439|ref|ZP_04908802.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|254207771|ref|ZP_04914121.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|254356328|ref|ZP_04972604.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|52429320|gb|AAU49913.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 23344]
 gi|121230140|gb|ABM52658.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei SAVP1]
 gi|124293428|gb|ABN02697.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10229]
 gi|126243405|gb|ABO06498.1| coproporphyrinogen dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147746686|gb|EDK53763.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei FMH]
 gi|147751665|gb|EDK58732.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei JHU]
 gi|148025325|gb|EDK83479.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei 2002721280]
 gi|160696525|gb|EDP86495.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei ATCC 10399]
 gi|217396542|gb|EEC36559.1| coproporphyrinogen dehydrogenase [Burkholderia pseudomallei 576]
 gi|238525479|gb|EEP88907.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei GB8 horse 4]
 gi|243065442|gb|EES47628.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           mallei PRL-20]
          Length = 464

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 150/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASELSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNVETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPNVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDTAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|145300972|ref|YP_001143813.1| coproporphyrinogen III oxidase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853744|gb|ABO92065.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 457

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 154/383 (40%), Gaps = 22/383 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            + +L +YVH PFC K C YC  N  + R++   + ++     E++    L   R ++ +
Sbjct: 49  PARNLSLYVHIPFCHKLCYYCGCNKVITRHQHKADQYLDYLEQEIKAQAPLFKHRLVTQL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ +       ++  + +++  +   EI+IE +P  +E+      R+ G NRIS
Sbjct: 109 HWGGGTPTYLNEAQTRRLMAMLREHFQFAEEGEISIEVDPREIELTMLDVLREVGFNRIS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ   +     + R  +     A +  AR   F   + DLIY LP Q    +   L+ 
Sbjct: 169 LGVQDFNKAVQVAVNREQDNDFIRAMLERARELGFRSTNLDLIYGLPHQNRESFHHTLEE 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L      LS++       + F   HK  +  +P+    + +   T +  +  G     +
Sbjct: 229 VLKTDPARLSIFNYAHLP-SRFAAQHKLKEEDMPAPREKLAMLQDTIAFLTGQGYQFIGM 287

Query: 254 SNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           E   + N+  Y      D +G+G  + S +     +     +K  
Sbjct: 288 DHFAKPDDELAVAQREGKLHRNFQGYTTQGDCDLLGLGVSSISMIGDAYSQN----QKEL 343

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           +++   V + GHA  +   L+ +      ++  L     ++    E   G         +
Sbjct: 344 KAYYAQVEELGHAQWKGCSLNQDDLIRREVIKRLICDFSLNFAAVEQAYGLVFKAYFADD 403

Query: 362 LQRQGFIER-VQFSRLRCTQRGM 383
           L+    ++  +    +R T  G+
Sbjct: 404 LK---LLQTFIDDGLVRMTDDGL 423


>gi|327385789|gb|AEA57263.1| Oxygen-independent coproporphyrinogen III oxidase [Lactobacillus
           casei BD-II]
          Length = 308

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 10/297 (3%)

Query: 104 SNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
              E T EANP+ +      Q     GVNR+S+GVQS  +  LR +GR H A +   AI 
Sbjct: 12  DQGEFTFEANPNDLLTTEKLQVLHDYGVNRLSIGVQSFNDDVLRRIGRIHRAKDVYTAIA 71

Query: 163 LARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            AR + F  +S DLI+ LP Q+   +   LQ+AL+  + H S Y L +E+ T+FY + + 
Sbjct: 72  NARQVGFDNISIDLIFRLPDQSRDDFLTSLQKALALDLPHYSTYSLILERKTIFYNLMRQ 131

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
           G L LP+++V  D+Y     +  AHG H YEISN +  G +  HNL YWR   Y G G G
Sbjct: 132 GKLRLPTQDVEADMYQDAIDLMEAHGRHQYEISNFAKDGYQCEHNLLYWRNDKYFGFGAG 191

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           A   +    +     I    + +L  +  +   V+E   +   +Q +E + +GLR  +G+
Sbjct: 192 AFGYLGRDRYHNYGPI----KQYLTPLHADHLPVLEHHLVPQSEQIEEEMFLGLRTMQGV 247

Query: 342 SVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           S   +       +D    E    L  QG + R Q   +R T +G  + + V     +
Sbjct: 248 SEARFYDRYHMTVDAIYGETVPELVSQGLVVR-QDGYIRLTNKGKFLGNEVFQRFLI 303


>gi|187925096|ref|YP_001896738.1| coproporphyrinogen III oxidase [Burkholderia phytofirmans PsJN]
 gi|187716290|gb|ACD17514.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phytofirmans PsJN]
          Length = 461

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 32/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A  +   G  +  L +Y H PFC   C YC  N    R +     ++     EM  
Sbjct: 40  DYLRAAAD--PGASATDLSLYFHIPFCDTVCFYCGCNKVATRNRAHARPYLDRLKREMAL 97

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
                   R +S + +GGGTP+ +     A ++    +++ +  +   E +IE +P    
Sbjct: 98  QAACFDTRRPVSQLHWGGGTPTFLSHDETAELMAATREHFKLLPDAEAEYSIEVDPREAS 157

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
            +     RK G NR+SLGVQ  +    + + R        + +  AR   F  +  DLIY
Sbjct: 158 PDTIAHLRKLGFNRLSLGVQDFDPIVQQAINRIQPLEMTASVMQAARETGFHSIGVDLIY 217

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L   L+ A D LS++        LF    +     LPS  V + +  
Sbjct: 218 GLPHQTVESFSRTLDTMLALAPDRLSVFAYAHMPQ-LFKMQRQMDPATLPSPEVRLAILQ 276

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHS 284
                 +  G     + + +    E        +LH  N+  Y      D IG G  +  
Sbjct: 277 RVVERLTGAGYVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIG 335

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      V     K    +   +     A+     L+++ +    ++  L     +   
Sbjct: 336 KVGD----VYAQNVKDLPGYSTAIDAGTLAIARGVRLTADDRLRRDVITQLMCNLELRFD 391

Query: 345 DWEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +E   G         ++E  R  ++ G +  ++  +L     G  ++ ++
Sbjct: 392 GFEAAYGIRFADTFEPELERLRGFEQDGLVS-LEAGKLEVRMAGRMLVRNI 441


>gi|42526974|ref|NP_972072.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
 gi|41817398|gb|AAS11983.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
          Length = 391

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 105/395 (26%), Positives = 183/395 (46%), Gaps = 36/395 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH-VRRYK----VGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           G+Y+H PFC++KC YCDF S    R+K         F+     +++            ++
Sbjct: 6   GLYIHIPFCLQKCNYCDFFSVRAGRFKNILSGHLSPFVLRLAEDIKIQADKYSINEWDTV 65

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPSL+ P ++  +   I      + + E T+E NP  +  +        G+NR S
Sbjct: 66  YIGGGTPSLLSPDDLYYLSSQIPAAQK-NPHREFTVEINPEDLTKDFLSAAVSGGINRFS 124

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QSL ++ L    R      +++A+ L R      +S DLI  L KQ++   + ++Q 
Sbjct: 125 VGIQSLNDEVLSACKRRGCRKMSLSALELLRSQKGLILSCDLIAGLNKQSLGILKDDIQT 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L +  +H SLY L             +  L    ++   +L++  + I   +  + YE+
Sbjct: 185 LLHFKPEHFSLYALC-----------SNTKLPPEKDDEIAELWSYGKDILEKNSYNKYEV 233

Query: 254 SNHSFLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR---------VAISIEKHPES 303
           SN S+    +S+HN  YWR  DYIG+GPGA   +               +  S  K+ E 
Sbjct: 234 SNFSYKNLYKSIHNEKYWRLEDYIGVGPGAFGSIFFDRKVLHANAHANALRFSAIKNIEK 293

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           W+ +  KN   V E E +  ++  +E  MMGLRL EGI    ++   G+++ +   + + 
Sbjct: 294 WMTL--KNRDEVYEYETIDEKEFIEEAFMMGLRLTEGIDRSFFKSRFGKDISVFAGKTIS 351

Query: 364 RQGFIERVQ----FSRLRCTQRGMTMLDSVIANLA 394
           +  +++R +      R   T++G   L+  +  L 
Sbjct: 352 K--WLDRNEAVLTEKRFYLTEKGFLYLNLFLQELF 384


>gi|330859006|emb|CBX69364.1| oxygen-independent coproporphyrinogen-III oxidase-like protein yggW
           [Yersinia enterocolitica W22703]
          Length = 278

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/286 (35%), Positives = 158/286 (55%), Gaps = 11/286 (3%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++  F GGGTPSL+  + +  +LDG+     ++ + EIT+EANP +VE + F GY++AG
Sbjct: 2   RLAPFFIGGGTPSLLSAEAMQQLLDGVRARLPLAIDAEITMEANPGAVEADRFSGYQRAG 61

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWE 188
           +NRIS+GVQS   + L  LGR H   EA  A  LA ++  R  + DL++ LP Q++ +  
Sbjct: 62  INRISIGVQSFSAEKLTRLGRIHGPDEAKRAAELATSLELRSFNLDLMHGLPDQSLEEAL 121

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L++A++    HLS YQLTIE  T F          LP ++   D++     + SA G 
Sbjct: 122 DDLRQAIALNPPHLSWYQLTIEPNTGFSSRPP----TLPDDDALWDIFQQGHQLLSAAGY 177

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKM 307
             YE S ++  G +  HNLNYWR+GDY+GIG GAH ++     R+  +I+ KHP  +++ 
Sbjct: 178 QQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKITFRDGRILRTIKTKHPRGFMQ- 236

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
               G  + ++  + +  +  EF M   RL E     D+      +
Sbjct: 237 ----GKYLDKQYEVEAADRPFEFFMNRFRLLEAAPRADFTHFYRIS 278


>gi|126696835|ref|YP_001091721.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9301]
 gi|126543878|gb|ABO18120.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9301]
          Length = 407

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 117/404 (28%), Positives = 194/404 (48%), Gaps = 35/404 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---------QENFIQSFLTEMQWMRQLTGP 68
               YVH PFC ++C YCDF       +V           + ++Q    E+  ++     
Sbjct: 5   PRSAYVHIPFCHRRCFYCDFAVIPLGNEVETLKGYGSKTVQEYLQFLYKEILSIKH---K 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +S+I+ GGGTPS+++P  I  +++   +N+ +    EIT+E +P+S   ++  G+  A
Sbjct: 62  SPLSTIYIGGGTPSILDPAQIKELVNLFKENYGIDYGAEITMEVDPASFTQDDLFGFINA 121

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-----RNIFPRMSFDLIYALPKQT 183
           G+NR SLGVQS   Q L+  GR H   +A+ +           +    S DLI  LP   
Sbjct: 122 GINRFSLGVQSFNNQILQKSGRRHLKEDAVKSCLWLKREYDNGLIKSWSLDLIQNLPLSG 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +W+ +L++A++++  HLS+Y L IE GT+F K+   G L LPS+  A      T  I 
Sbjct: 182 FKEWQDDLKKAITFSPPHLSIYDLNIEDGTVFKKLINLGKLKLPSDEEAFRNSESTHLIL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN+     +S HN  YW    +   G G+ S    G       + K  + 
Sbjct: 242 KKSGYSRYEISNYCLPRHQSRHNRVYWSGLGWWSFGQGSTSS-PWGEKFTRPRVSKEYKE 300

Query: 304 WLKMVRKNGH--AVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLAGRN------- 353
           W+    +     ++  K F+  E   DE +M+GLRL+EG+ +K+ ++     N       
Sbjct: 301 WVTRQDEFNLDSSLTNKGFVYKE--LDEKIMLGLRLKEGVDIKEVFKEQNWENKKLESNF 358

Query: 354 --LDIECERNLQRQGFIERVQFSRLRCTQ-RGMTMLDSVIANLA 394
             L  E ER L+  G + R + +R   ++  GM + + ++ ++ 
Sbjct: 359 SKLVEEWERFLES-GLLVR-KGNRFFLSEPNGMELSNQILVSMF 400


>gi|171463796|ref|YP_001797909.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193334|gb|ACB44295.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 471

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/410 (19%), Positives = 150/410 (36%), Gaps = 30/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A E     +    L +Y H PFC   C YC  N  + +       +I+    EM  
Sbjct: 49  DYLGALER--VAKADEPLSLYFHLPFCPNICYYCGCNKIITKDHGRSAKYIKYLSKEMAM 106

Query: 62  MRQLTGPRS---ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           + +  G +    +S + +GGGTP+ +  + +  ++    +++ +    E +IE +P  V 
Sbjct: 107 VTKAMGAQKKILVSQLHWGGGTPTFLSHEEMIELMHHTREHFELLPGGEYSIEIDPRRVT 166

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
             +     + G NRISLGVQ         + R     E  A I+ +R   F   S DLIY
Sbjct: 167 EKDIALLAELGFNRISLGVQDFNLAVQEAVHRVQTIEETQAVINWSRKYGFKSRSVDLIY 226

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQT   ++  +   L+   D LS+Y        +F    +  +  LP     +D+ +
Sbjct: 227 GLPKQTPVTFKETVDAVLAMNPDRLSVYNYAHLPH-IFKPQRRIAEADLPPAADKLDILS 285

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
            T       G     + + +           E   + N+  Y      D +  G  +  +
Sbjct: 286 NTIKRLGEAGYVFIGMDHFAKPNDELAIAQKEGKLHRNFQGYSTRAECDLLAFGISSIGK 345

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      +  + + + +      V+    L  +      L+  L  +  +  K 
Sbjct: 346 VDDCYSQNV----RTLDEYYEALDSGHLPVLRGLRLDQDDLMRRELIGELMCQFALDTKS 401

Query: 346 WEMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
           +      +     +  ++        G ++    + L  T +G  +   V
Sbjct: 402 FAKTHQIDFPTYFKTEIEELKGLGEVGLLDWEGETILVPT-KGRLLARRV 450


>gi|326566636|gb|EGE16778.1| oxygen-independent coproporphyrinogen III oxidase-like protein YggW
           [Moraxella catarrhalis BC1]
          Length = 322

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 111/330 (33%), Positives = 174/330 (52%), Gaps = 19/330 (5%)

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+  ++   + DG+   +  +   EIT+EANP ++E + F  Y   G+NR+S+
Sbjct: 1   IGGGTPSLLPIESFKRLFDGLRLIYDFAPTCEITLEANPGTLEHSPFDEYLTIGINRLSI 60

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +  +L  LGR HN  +A  AI  AR   F R++ DL+Y LP Q  ++   ++Q A
Sbjct: 61  GVQSFDHNALTVLGRIHNPDQASNAIRAARIAGFDRVNADLMYGLPNQNPSKAVNDIQTA 120

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +     HLS YQLTIE  T FY+        LP E +  ++  L QS+ + HG + YE+S
Sbjct: 121 IDAGATHLSWYQLTIEPNTTFYRTPP----QLPDEEIMAEIETLGQSVLTKHGFYNYEVS 176

Query: 255 NHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------RVAISIEKHPESWLKM 307
                  A   HNLNYW++GDY+ IG GAH ++ + +H             + P+ +L  
Sbjct: 177 AWHGPNDAPCQHNLNYWQFGDYLAIGAGAHGKLTLKNHPDYQDGIYRYQKSRQPKDYLAF 236

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECERNLQR 364
             ++   +V  E +S +    EF+M  LRL++G+S   +E   G     +D E    LQ 
Sbjct: 237 --EDAPKMVNFERISDDNLPFEFMMNALRLKDGVSTDVFETRTGLLISTIDNEML-PLQH 293

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           QG +  +   R+  T+ G   ++ +++   
Sbjct: 294 QGLMV-LDPLRIAPTRLGFRYVNYLVSQFI 322


>gi|167903903|ref|ZP_02491108.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei NCTC
           13177]
          Length = 464

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 149/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          I  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLIRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIERLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +  G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFEHDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|91975964|ref|YP_568623.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB5]
 gi|91682420|gb|ABE38722.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris BisB5]
          Length = 449

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 147/396 (37%), Gaps = 27/396 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
              + +Y+H PFC + C YC  N  +        ++++S + E+  +   + G   +  +
Sbjct: 44  DEPISLYLHVPFCKQMCWYCGCNMKLASKYGPVADYVESLIDEIDLVADAMPGTLPVRHL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP++IEP+++  I+  + + +   S+ E+ IE++P ++         + G  R S
Sbjct: 104 HFGGGTPTVIEPEDLGAIMTLLRERFEFVSDAEVAIESDPRTLTDEMAAKIGELGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+   +     R++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQAAINRIQPPEMVAHAMARFKAAGVQRINFDLIYGLPYQTAEDLRSTVEQ 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D ++L+        +        D  LP  ++  +  +         G     I
Sbjct: 224 CVEMKPDRVALFGYAHVP-WVAKNQRMIPDDSLPKSDLRSEQADAAADALVKGGYVRIGI 282

Query: 254 SNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +              LH  N+  Y        IGIG  +  R   G  +        
Sbjct: 283 DHFALPNDSLAIAAKTGELHR-NFQGYTSDAAQTLIGIGSTSIGRTPSGYLQNISET--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-----RNLD 355
             +W + V      V     L+ +      ++  +     I +       G        +
Sbjct: 339 -GAWARAVAAGKLPVARGHTLTQQDNLRAHVIERIMCDGKIDLAAAGRAFGYADDWYAPE 397

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
            E   +LQR G +      +L  T  G+ +   V +
Sbjct: 398 EEALADLQRDGAVV-CDHGKLTLTPEGIRLSRVVAS 432


>gi|110597015|ref|ZP_01385304.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           ferrooxidans DSM 13031]
 gi|110341206|gb|EAT59671.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           ferrooxidans DSM 13031]
          Length = 472

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 85/394 (21%), Positives = 166/394 (42%), Gaps = 23/394 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +  ++++ L E Q    +   R ++  +
Sbjct: 49  TTGISLYIHIPYCENHCYFCGCNAHRTQDHSYETPYLEALLKEWQMYTDVFPGRLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DGI KN     N   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFFSPENLIRLIDGICKNVNKMDNYMFSFETNPKSTTREHLEALYSVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       I LAR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 169 FGIQDFDPIVQEEINRLQSFELVKEKIDLAREIGFTSINFDLVYGLPKQTLATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +V  +LY+   ++  + G H   +
Sbjct: 229 VMQLKPDRLAFYAYG-HNPHMYEGQRKFKEEDLPVGDVKQELYDKGSAMLESIGYHEIGM 287

Query: 254 SNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G      A +  LH  N+  Y +      + +G  + S     +       E+ 
Sbjct: 288 DHFAIEGDALYIAARNGTLHR-NFMGYTENTTQMMLALGSSSIS----DTWYAFAQNERD 342

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECE 359
             S++K V +    +     L+ E       ++ L  ++  S  D ++     ++ +   
Sbjct: 343 DTSYIKAVNEGRFPLHRGHLLTDEDLVLRRHILNLMCKQETSWADPKLYTEELDIALYRL 402

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +++  G +     S +R T+ G+  L ++    
Sbjct: 403 EDMENDGLVVLGDKS-VRVTEVGIPFLRNICMAF 435


>gi|194217113|ref|XP_001499707.2| PREDICTED: similar to Radical S-adenosyl methionine domain
           containing 1 [Equus caballus]
          Length = 412

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 132/375 (35%), Positives = 209/375 (55%), Gaps = 19/375 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN ++ R  V +       +TE Q + QL+G R + S+FFGGGTPSL 
Sbjct: 16  WPYCEKRCSYCNFNKYIPRG-VEEAAMRSCLVTEAQTLLQLSGVRRVDSVFFGGGTPSLA 74

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +A +L+ +A+   + ++ E+T+E NP+S   +    +  AGVNR+S+G+QSL++  
Sbjct: 75  SPHTVAAVLEAVAQAAHLPADSEVTLEVNPTSAPGSRLAAFGAAGVNRLSIGLQSLDDTE 134

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           LR LGR H+A++A+  +  AR++FP R+S DL+  LP Q +  W  +L+  L +  DH+S
Sbjct: 135 LRLLGRTHSANDALRTLAEARHLFPGRVSVDLMLGLPAQQVGPWLGQLRELLRHCDDHIS 194

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN +  GA S
Sbjct: 195 LYQLSLERGTALFTQVQQGTLPAPDPELAAEMYQEGRAVLREAGFRQYEVSNFARNGALS 254

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEKE 319
            HN  YW+ G YIG+GPGAH R     VG H     I+   P++W+K V   GH   ++ 
Sbjct: 255 THNWTYWQCGQYIGVGPGAHGRFMPQGVGGHIREARIQTLEPDNWMKEVMLFGHGTRKRV 314

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQGFIER 370
            L   +  +E L MGLR   GI+ + W+            G + +++             
Sbjct: 315 PLGELELLEEVLAMGLRTDVGITHQHWQQFEPQLNLWDVFGASTEVKVLLEQGL----LL 370

Query: 371 VQFSRLRCTQRGMTM 385
           +    LRC+  G+ +
Sbjct: 371 LDHRGLRCSWEGLAV 385


>gi|153871923|ref|ZP_02000966.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
 gi|152071613|gb|EDN69036.1| oxygen-independent coproporphyrinogen III oxidase [Beggiatoa sp.
           PS]
          Length = 435

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 173/381 (45%), Gaps = 12/381 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRS 70
           G  +  L +Y+H P+C +KC YC + +     K   + ++ +   E+++  +      R 
Sbjct: 47  GTENKPLNIYLHIPYCAQKCAYCYYRTIQGSRKSETDRYVDALCKEIEFASERFHLKNRP 106

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I SI+FGGGTP+L++  N++ I++ + K+       E+++EA P ++        +K  V
Sbjct: 107 IESIYFGGGTPTLLDENNLSQIVETLHKHLNTKQPHELSVEAEPVTLTQRKADALKKLKV 166

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NRIS+GVQSL +  ++   R     +AI AI +AR+    ++ DL+  L  +    +   
Sbjct: 167 NRISMGVQSLCDDIIKHTDRQDTEKKAIRAIEIARSTGAVVNIDLMSGLAGENKDTFSYS 226

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + RAL   V+ +++Y+  +   T +Y   ++  L LP++   ++                
Sbjct: 227 VNRALESGVESITVYKTELYANTKYYMRIRNEGLDLPTDEQELEFMQYAMDKLEEANYLP 286

Query: 251 YEISNHSFLGAES-LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +     +  G  + +H+ N +R  DY   G  A  R+     +     EK    ++ ++ 
Sbjct: 287 WSFFTFTKGGKYTHVHSPNVFRGEDYYAFGASAFGRLGNVLFQNTNESEK----YIDILE 342

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQG 366
                +     L+S  Q    +++G++L   + +  ++   G  L+  C     +LQ  G
Sbjct: 343 AGELPISRGHHLTSMDQMVRDVVLGMKLVR-LDLNRFQNKYGFRLESLCAPTVESLQADG 401

Query: 367 FIERVQFSRLRCTQRGMTMLD 387
           F+       +  T +G+   D
Sbjct: 402 FVTLSDNE-IALTNKGILYGD 421


>gi|146282463|ref|YP_001172616.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
 gi|145570668|gb|ABP79774.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
          Length = 462

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 88/414 (21%), Positives = 157/414 (37%), Gaps = 28/414 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y +A   +   Q    L VY+H PFC   C YC  N  +         +++    E+  
Sbjct: 39  DYRAAAARSNQAQPPKPLSVYIHIPFCKSLCYYCACNKIITHKTERAVEYLEYLKREIAM 98

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVE 118
              L    R ++ +  GGGTP+    + +A ++  + +  N   S + E ++E +P +V 
Sbjct: 99  QGALFDRSRKLTQLHLGGGTPTYFTSEQLADLMASLHQAFNMDDSDSHEFSLEVDPRTVT 158

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                G RK G NR+S GVQ  +EQ    + R     +    +  AR+  F  +S DLIY
Sbjct: 159 PEQIHGLRKLGFNRLSFGVQDFDEQVQIAVNRIQTEEQTRELVQAARDARFKSVSVDLIY 218

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  ++  L + +    D ++ Y        +  +     + + P     ++L  
Sbjct: 219 GLPLQTVASFDATLSKIIDIRPDRIAAYSYAHLPDLVRAQKLIRPEDMPP-PERKLELLE 277

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSR 285
           LT    +A G     + + S    E   +  N     N+  Y      D IG+G  +  +
Sbjct: 278 LTIQRLTAAGYVYIGMDHFSLPEDELTLARANGTLQRNFQGYSTHADCDLIGLGISSIGK 337

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K    +   +      V     LS + +    +++ L     I  + 
Sbjct: 338 VADSYSQNV----KELSQYYARLNDGMLPVHRGYKLSDDDRLRRDVIVSLMCHGRIDYRQ 393

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G +       +L +       G +E ++   L    +G  M+ +V    
Sbjct: 394 IEQKHGIDFRSYFADSLAKLAEPVADGLVE-LRDDALILLPQGQLMMRNVAMAF 446


>gi|117620055|ref|YP_854800.1| coproporphyrinogen III oxidase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561462|gb|ABK38410.1| oxygen-independent coproporphyrinogen III oxidase [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 457

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/392 (20%), Positives = 159/392 (40%), Gaps = 22/392 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            +    +   + +L +YVH PFC K C YC  N  + R++   + ++     E++    L
Sbjct: 40  DFVQAASQYPARNLSLYVHIPFCHKLCYYCGCNKVITRHRHKADQYLDFLEQEIKAQAPL 99

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R ++ + +GGGTP+ ++      ++  + +++  +   EI+IE +P  +E++     
Sbjct: 100 FKQRLVTQLHWGGGTPTYLDEPQTRRLMAMLREHFHFAEEGEISIEVDPREIELSMLDVL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R+ G NRISLGVQ   ++    + R  +     A +  AR   F   + DLIY LP Q  
Sbjct: 160 REIGFNRISLGVQDFNKEVQVAVNREQDNDFIRAMLERARELGFRSTNLDLIYGLPHQNR 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L+  L      LS++       + F   HK  +  +P+    + +   T +  +
Sbjct: 220 ESFHHTLEEVLKTDPARLSIFNYAHLP-SRFAAQHKLKEADMPAPQEKLAMLQDTIAFLT 278

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           E   + N+  Y      D +G+G  + S +     +
Sbjct: 279 GRGYQFIGMDHFAKPDDELAVAQREGKLHRNFQGYTTQGDCDLLGLGVSSISMIGDAYSQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  +++   V   GHA  +   L+ +      ++  L     ++    E   G 
Sbjct: 339 N----QKELKAYYGQVETLGHAQWKGCSLNQDDLIRREVIKRLICDFRLNFAAVEQAHGL 394

Query: 353 NLDIECERNLQRQGFIER-VQFSRLRCTQRGM 383
                   +L+    ++  +    +R T+ G+
Sbjct: 395 VFREYFAEDLK---LLQTFIDDGLVRMTEEGL 423


>gi|78779792|ref|YP_397904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9312]
 gi|78713291|gb|ABB50468.1| coproporphyrinogen III oxidase, anaerobic [Prochlorococcus marinus
           str. MIT 9312]
          Length = 407

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 115/401 (28%), Positives = 191/401 (47%), Gaps = 37/401 (9%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---------QENFIQSFLTEMQWMRQLTGP 68
               YVH PFC ++C YCDF       KV           + ++     E+  ++     
Sbjct: 5   PRSAYVHIPFCHRRCFYCDFAVIPLGNKVETLHGYGSKTVKEYLHYLSKEILSIKH---K 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +S+I+ GGGTPS+++PQ I  ++D   +N+ V    EIT+E +P+S   ++  G+  A
Sbjct: 62  SPLSTIYVGGGTPSILDPQQIKELIDLFKENYGVDYGAEITMEVDPASFNEDDLYGFINA 121

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQT 183
           G++R SLGVQS   Q L+  GR H   +A  +    + +F        S DLI  LP   
Sbjct: 122 GISRFSLGVQSFNNQILQNSGRRHLREDAEKSCLWLKRVFDNGLIKSWSLDLIQNLPLSG 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +W+ +L +A+++   H+S+Y L IE GT+F K+   G L +PS+  A     +T  I 
Sbjct: 182 FKEWQDDLNKAITFLPPHISIYDLNIENGTVFKKLVNLGKLEVPSDEEAFRNSEVTHVIL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN+     +S HN  YW    +   G G+ S    G       + K  + 
Sbjct: 242 KNSGYSRYEISNYCLPRHQSRHNRVYWSGSGWWSFGQGSTSS-PWGEKLTRPRVSKEYKE 300

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISV------KDWE-MLAGR 352
           W+  +R+    +     L+++     + DE +M+G+RL+EGI +      ++WE      
Sbjct: 301 WV--IRQYELNLDSS--LTNKDFVYKELDEKIMLGMRLKEGIDIYEVFKEQNWENKKFES 356

Query: 353 NLDIECE--RNLQRQGFIERVQFSRLRCTQ-RGMTMLDSVI 390
           NL    E        G + R + +R   ++ +GM + + ++
Sbjct: 357 NLSKLLEEWERFLESGLLVR-KGNRFFLSEPKGMELSNQIL 396


>gi|188997369|ref|YP_001931620.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932436|gb|ACD67066.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 462

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 72/405 (17%), Positives = 152/405 (37%), Gaps = 31/405 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PR 69
           + +    L +Y H PFC   C +C  N  + R K   + ++     EM   + L     R
Sbjct: 50  SNERKTPLSLYFHIPFCENACHFCGCNVIITRRKEVVKPYLDHIYKEMDLYKTLIDANNR 109

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  + +GGGTP+ +  +    + D I K + +    EI+IE +P  V+ +     RK G
Sbjct: 110 KVVQLHWGGGTPNYLSDEETVELFDEIKKRFQIDEKAEISIEIDPRHVDRDRIFLLRKIG 169

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR S G+Q    +  + + R       +  +   R   F  ++ DLIY LP QT+  + 
Sbjct: 170 FNRASFGIQDFNPKVQQAVNRIQPEEMILNVMKWFREAGFESVNIDLIYGLPYQTLETFS 229

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHG 247
             + + +    D ++++           ++ ++ D   LP     + +  +T    +  G
Sbjct: 230 DTIDKTIKLNPDRIAVFNFAYVP--WLKRLQRNIDEKTLPPPEEKLKILQMTIEKLTKSG 287

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      +  G G  + S +    +   
Sbjct: 288 YVFIGMDHFAKPNDELAIAQRERTLHR-NFQGYTTKAEAELFGFGATSISML----YDAY 342

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           +   K    + + +  +   +    +L+ +      ++M L     +   + E       
Sbjct: 343 VQNYKVLREYYEPIENSQLPIERGVYLAQDDIIRREVIMKLMCHFRLIKSEIEEKFNIKF 402

Query: 355 DIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           D   ++ L      +  G +      R+  +  G  ++ ++ +  
Sbjct: 403 DEYFKQELESLKEMEEDGLLILY-PGRIDVSPIGRLLIRNIASTF 446


>gi|167527175|ref|XP_001747920.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773669|gb|EDQ87307.1| predicted protein [Monosiga brevicollis MX1]
          Length = 463

 Score =  259 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 126/465 (27%), Positives = 215/465 (46%), Gaps = 86/465 (18%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHV------------RRYKVGQENFIQSFLTEM- 59
              + +L VYVHWPFC + C YCDF  +             R      +  +Q++  ++ 
Sbjct: 2   AAKARALAVYVHWPFCSRICTYCDFVKYPAIKQPAWFRGAGRGADPTHDEVLQAYRRQLT 61

Query: 60  QWMRQLTGP---RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPS 115
           Q ++QL  P   R ++S++FGGGTPSL+ P  +  ++D +   +  SS+ VEIT+EANP 
Sbjct: 62  QLVQQLPSPNTQRQLTSLYFGGGTPSLMSPSLLRRLVDLVYTMFPPSSHPVEITLEANPD 121

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSF 173
           ++  +    ++ AG+NR+S+GVQ++ +  L+ LGR H+A  A+  +  A+++F    +S 
Sbjct: 122 NITRDTLARWQTAGINRLSIGVQAIRDPLLQALGRQHSAEVALRVVKQAQDVFGSTGVSL 181

Query: 174 DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           DL++ LP Q +  W  +L   L      H+S+Y+LT+++GT+ Y       L +P  +  
Sbjct: 182 DLMFGLPGQALDDWCTDLDHVLTELKPAHMSIYELTVKRGTILYHQ-TKLGLKVPDPD-- 238

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHS------- 284
            D Y  TQ I SAHGL  YE+SN++      S HN+ YWR  DY+GIGPGA +       
Sbjct: 239 -DYYFATQDICSAHGLERYEVSNYAQSPTMFSRHNMAYWRGTDYLGIGPGAVTSTIDLVS 297

Query: 285 ------------RVKVGSHRVAISIEKHP------------ESWLKMVRKNGHAVVEKEF 320
                        + V S      + ++             +  +  +R+        + 
Sbjct: 298 RQLVLCYQAKSMYLAVPSPFKRQPVLRYQQVHTCLLTLRDGDGCMATLRQRWRLDGMDQA 357

Query: 321 L---SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIE----- 369
           L   + E+   + +    R RE   +       G +L  +  + LQ+    G +E     
Sbjct: 358 LIKRTMEEAVTDIVAFLCRTREPFDLAQVAAHFGVSLQPKARKELQQLAQAGLLEYSEKI 417

Query: 370 ------------RVQFSRL----RCTQRGMTMLDSV---IANLAV 395
                         +   L    R T +G+ + + +   +A L +
Sbjct: 418 QPTAWASRFNQPITEAGHLPASIRLTGKGLDVCNRLSTTVAELLL 462


>gi|332298039|ref|YP_004439961.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           brennaborense DSM 12168]
 gi|332181142|gb|AEE16830.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           brennaborense DSM 12168]
          Length = 417

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 189/415 (45%), Gaps = 43/415 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  KC YCDF S     +   + ++ +   E+ +  +     +  +++ GGG
Sbjct: 7   SLYLHIPFCKAKCAYCDFFSVPA--EHVPDRYVDALCAEIAFHAEAENLAAPETVYIGGG 64

Query: 80  TPSLIEPQNIALILDGIAKNWT------VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           TPSL+ P  +  I+  +   +        +   EIT+E NP S+     +   + GVNRI
Sbjct: 65  TPSLLSPAQLERIMFRLDSLYPSGVKPGAACAPEITLEVNPESLCEPFLETALRCGVNRI 124

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S+GVQ+L++ +LR + R  +   A+ A+ L      R S D+I  LP+   T +   L+ 
Sbjct: 125 SVGVQALDDGALRCVRRRCSRERALGALSLLSRSGVRFSADMIAGLPELGDTAFVSGLKE 184

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L+Y  +H+SLY LT+E+ T  Y+  + G L   +E      +   +++    G   YE+
Sbjct: 185 VLTYNPEHVSLYALTVEESTPLYRQIERGRL-AYTEETTDSQWLAGRALLERAGYAQYEV 243

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIG------------------------PGAHSRVKVG 289
           SN +  G  S HN  YWR   Y G G                        P A  +  + 
Sbjct: 244 SNFAKPGCRSRHNTAYWRQRSYAGAGAGAVGTLYDTEAAAAVAITAAAREPAARVKSAL- 302

Query: 290 SHRVAISIEKHPESWLKMV------RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
            +     I  + + W +         +     +E+E L ++  A EF M+GLRLREGI+ 
Sbjct: 303 RYANTADIAVYTDFWTETAPDPRGFAEGADFPLERELLDADTLAFEFCMLGLRLREGIAA 362

Query: 344 KDWEMLAGRNLDIECERNLQRQGF-IERVQFSRLR--CTQRGMTMLDSVIANLAV 395
            ++E   G+ LD       +++G  ++      +R   +  G+  L++ ++ L  
Sbjct: 363 GEYEERFGKKLDTAVFEKWRQKGLAVKYSDCGEIRYALSADGILFLNAFLSELLA 417


>gi|167720827|ref|ZP_02404063.1| coproporphyrinogen III oxidase [Burkholderia pseudomallei DM98]
          Length = 464

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 149/412 (36%), Gaps = 34/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSNAETTELMAATREYFTLASDRTGEFSIEIDPRTAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ       R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFGPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIVELEPDRLSVFGYAHLPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +  G E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARPGDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +     LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIARGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCT--QRGMTMLDSV 389
            E   G     +  R L      +R G +        R T    G   + ++
Sbjct: 396 VEAAYGIRFANKFARELDTLRGFERDGLLSIGAD---RLTIHPAGRLYVRNI 444


>gi|161723176|ref|YP_442055.2| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
 gi|167618996|ref|ZP_02387627.1| coproporphyrinogen III oxidase [Burkholderia thailandensis Bt4]
 gi|257138237|ref|ZP_05586499.1| coproporphyrinogen III oxidase [Burkholderia thailandensis E264]
          Length = 464

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 34/407 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSQAETTELMAATREYFTLASDRTGEFSIEIDPRAAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTVVELEPDRLSVFGYAHMPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARPDDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +V    LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIVRGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCT--QRGMT 384
            E   G         +++  R  +R G +        R T    G  
Sbjct: 396 VEAAYGIRFANKFSSELDTLRGFERDGLLSIGAD---RLTIHPAGRL 439


>gi|327480719|gb|AEA84029.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri DSM 4166]
          Length = 462

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 88/414 (21%), Positives = 157/414 (37%), Gaps = 28/414 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y +A   +   Q    L VY+H PFC   C YC  N  +         +++    E+  
Sbjct: 39  DYRAAAARSNQAQQPKPLSVYIHIPFCKSLCYYCACNKIITHKTERAVEYLEYLKREIAM 98

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVE 118
              L    R ++ +  GGGTP+    + +A ++  + +  N   S + E ++E +P +V 
Sbjct: 99  QGALFDRSRKLTQLHLGGGTPTYFTSEQLADLMASLHQAFNMDDSDSHEFSLEVDPRTVT 158

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                G RK G NR+S GVQ  +EQ    + R     +    +  AR+  F  +S DLIY
Sbjct: 159 PEQIHGLRKLGFNRLSFGVQDFDEQVQIAVNRIQTEEQTRELVQAARDARFKSVSVDLIY 218

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  ++  L + +    D ++ Y        +  +     + + P     ++L  
Sbjct: 219 GLPLQTVASFDATLSKIIDIRPDRIAAYSYAHLPDLVRAQKLIRPEDMPP-PERKLELLE 277

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSR 285
           LT    +A G     + + S    E   +  N     N+  Y      D IG+G  +  +
Sbjct: 278 LTIQRLTAAGYVYIGMDHFSLPEDELTLARANGTLQRNFQGYSTHADCDLIGLGISSIGK 337

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      K    +   +      V     LS + +    +++ L     I  + 
Sbjct: 338 VADSYSQNV----KELSQYYARLNDGMLPVHRGYKLSDDDRLRRDVIVSLMCHGRIDYRQ 393

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G +       +L +       G +E ++   L    +G  M+ +V    
Sbjct: 394 IEQKHGIDFRSYFADSLAKLAEPVADGLVE-LRDDALILLPQGQLMMRNVAMAF 446


>gi|149277120|ref|ZP_01883262.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Pedobacter sp. BAL39]
 gi|149231997|gb|EDM37374.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [Pedobacter sp. BAL39]
          Length = 355

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 11/352 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
            E    +   E+   ++      I SI+FGGGTPS++    +A I D + +++++SS+ E
Sbjct: 4   VEEMTDAICKEL-VQKKSRATDQIGSIYFGGGTPSVLPDHALAKIFDTLTRHYSISSDAE 62

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIEANP  +     +  ++  VNR S+G+QS  E+ LR++ R HN  EA   I  +++ 
Sbjct: 63  ITIEANPDDLNAQKIRALKQLPVNRFSIGIQSFFEEDLRWMNRAHNVQEAEECIKRSQDA 122

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            F  ++ DLIY  P  T  +W   + +A+ +   H+S Y LT+E  T      K G    
Sbjct: 123 GFENLTIDLIYGYPLLTDQKWLSNINKAIEFQTPHISAYSLTVEPRTALASAIKRGKQTP 182

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
            ++  + D +       S+ G   YEISN S  G  ++HN NYWR   YIGIGP AH   
Sbjct: 183 VNDEQSADQFLTLIDKLSSAGFQHYEISNFSQPGKYAVHNTNYWRGVSYIGIGPSAHGFD 242

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
               +    +       +L+ + +        E L    + +E++M  LR   G  +   
Sbjct: 243 GHTRYLNVANN----ALYLRDMDQGKLP-ETIEQLDIYDRFNEYIMTSLRTMWGTDLDQV 297

Query: 347 EMLAGRNLDIECERN---LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               G     +  ++      + ++ + Q ++L  T  G    D + + L +
Sbjct: 298 MRNFGSEFHKDTLKHIKPFVEKKWLSQ-QDNQLTLTTDGKLFADHIASELFL 348


>gi|320530572|ref|ZP_08031628.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas artemidis F0399]
 gi|320137187|gb|EFW29113.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Selenomonas artemidis F0399]
          Length = 357

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 165/355 (46%), Gaps = 14/355 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           QE +  +   E+         R    ++++FGGGTP+ +    +  +++ +       + 
Sbjct: 9   QEQYAAALRAEILRTAPPLFARFGDAATVYFGGGTPTALPAHLLVGLIETLRAAAG--TP 66

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            E+T+EANP +V+   F   R A VNRISLGVQS ++  L  +GR H A EA AA   AR
Sbjct: 67  AELTVEANPGTVDEEYFAQLRAAEVNRISLGVQSFDDALLGRIGRIHTAEEARAAFRAAR 126

Query: 166 N-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
              F  +S DL+Y LP QT+   +  ++  ++   +H+S+Y LT+E+GT F      G L
Sbjct: 127 AAGFTNISIDLMYGLPGQTLHDLQESVRAVIALVPEHISVYGLTVEEGTPFAAAQAAGRL 186

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            LP E  A ++Y+   +   A G   YEISN +  G ES HNL YWR   Y+G+G  AH 
Sbjct: 187 DLPPEETAEEMYDYLMAELPARGYLRYEISNFARRGFESRHNLGYWRSVPYLGVGAAAHG 246

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHA-VVEKEFLSSEQQADEFLMMGLRLREGISV 343
            V      V    E+   ++++ V         E    +     +E+  + LR   GI  
Sbjct: 247 YVDN----VRWENERDTAAYIRRVMAGEDVRRAEDGERTRTAAMEEYAFLALRTAAGIDE 302

Query: 344 KDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            D+    G   +         L  +G ++R        T  GM   + V A   +
Sbjct: 303 TDFHRTWGVPFEEVYGAVLPRLIEKGLLKRAD-GFTALTPLGMKYGNEVFAEFLL 356


>gi|295677384|ref|YP_003605908.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
 gi|295437227|gb|ADG16397.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1002]
          Length = 461

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 144/380 (37%), Gaps = 29/380 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
            G  S  L +Y H PFC   C YC  N  V + +     +++    E+          R 
Sbjct: 48  PGAASTDLSLYFHIPFCDTVCFYCGCNKVVTKNRAHARPYLERLKREIALQAACFDTQRP 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKA 128
           +S + +GGGTP+ +    ++ ++    +++ +  +   E +IE +P     +     R  
Sbjct: 108 VSQLHWGGGTPTFLSHDEMSELMAATREHFNLLPDTEAEYSIEVDPREASPDTIALLRHL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ  + +  + + R        + +  AR + F  +  DLIY LP QT+  +
Sbjct: 168 GFNRLSLGVQDFDPRVQQAINRMQPFEMTASVMQAARAHGFHSIGVDLIYGLPHQTVASF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   L  A D LS++        LF    +     LPS    + L        +  G
Sbjct: 228 SRTLDTMLELAPDRLSVFAYAHMPQ-LFKMQRQMDAATLPSSEERLALLQRVVERLTGAG 286

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      D IG G  +  +V     + A
Sbjct: 287 YVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIGKVGDVYAQNA 345

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               +   ++   +     A+     LS++ +    ++  L     +   ++E   G + 
Sbjct: 346 ----RELPAYTDAIDAGRLAIARGIRLSADDRLRRDVITQLMCNLELRFDEFEAAYGIHF 401

Query: 355 ------DIECERNLQRQGFI 368
                 ++   R  +  G I
Sbjct: 402 GDTFAPELARLRAFEDDGLI 421


>gi|298346288|ref|YP_003718975.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 43063]
 gi|298236349|gb|ADI67481.1| coproporphyrinogen dehydrogenase [Mobiluncus curtisii ATCC 43063]
          Length = 439

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 105/380 (27%), Positives = 161/380 (42%), Gaps = 56/380 (14%)

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R+++S+FFGGGTP+++   ++  +L G+++ + +    EIT EANP +V     +   
Sbjct: 61  DGRALTSVFFGGGTPTVLPATDLVRVLRGLSETFGLVPGAEITTEANPDTVTPQYLEALA 120

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             G  R+S G+QS     L  L R H     +A +  AR     +S DLIY  P +++  
Sbjct: 121 AGGFTRVSFGMQSAVPAVLATLNRTHQQKHLVAGVRAARAQGLEVSVDLIYGTPGESLAD 180

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL   VDH+S Y L IE GT   +    GD+     +   D Y L     SA 
Sbjct: 181 WRPSLDAALELGVDHVSCYALVIEPGTALGRALAQGDIPPVDPDDQADKYELADETLSAA 240

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           GL  YEISN +  G E  HNL YWR  D+ G GPGAHS +            +HP  W++
Sbjct: 241 GLQWYEISNWARPGHECRHNLAYWRDQDWYGFGPGAHSHLGSTRFWNL----RHPAKWMQ 296

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQR 364
            ++     V  +E ++ +    E L++ LRLR+G+ + ++    G +          L +
Sbjct: 297 SLQAGYRPVDGREIVTGDSARLERLLLNLRLRQGLDLGEYAGEFGVDQAALLSEAHELAQ 356

Query: 365 QGFIE--------------------------------------------------RVQFS 374
           +G ++                                                       
Sbjct: 357 EGLLDGALLPEDATSGDRELAQKDGSLSVGLCSQGDGLSHQDGLLHQDGSATDSLTSNTG 416

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R   T+ G  + D+VI  LA
Sbjct: 417 RAVLTRHGRLLADTVIQRLA 436


>gi|157413873|ref|YP_001484739.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9215]
 gi|157388448|gb|ABV51153.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9215]
          Length = 407

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 112/402 (27%), Positives = 188/402 (46%), Gaps = 33/402 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG---------QENFIQSFLTEMQWMRQL 65
                  Y+H PFC ++C YCDF       KV           + ++     E+  ++  
Sbjct: 2   NKYPRSAYIHIPFCHRRCFYCDFAVIPLGNKVDTLQGYGSKTVKEYLNFLYKEILSIKH- 60

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                +S+I+ GGGTPS+++P+ I  ++D   +N+ +    EIT+E +P+S   ++  G+
Sbjct: 61  --KSPLSTIYLGGGTPSILDPKQIKELIDIFRENYGIDYGAEITMEVDPASFNQDDLYGF 118

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-----NIFPRMSFDLIYALP 180
             AG+NR SLGVQS   Q L   GR H   +A  +    +      +    S DLI  LP
Sbjct: 119 IHAGINRFSLGVQSFNNQILEKSGRRHLREDAEKSCLWLKREYDAGLIKSWSLDLIQNLP 178

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
                +W+ +L++A++++  H+S+Y L IE GT+F K+   G L LPS+  A      T 
Sbjct: 179 LSGYKEWQDDLKKAITFSPPHISIYDLNIENGTVFKKLVNLGKLKLPSDEEAFRNSESTH 238

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            I    G   YEISN+     +S HN  YW    +   G G+ S    G       + K 
Sbjct: 239 LILKNSGYSRYEISNYCLPQHQSRHNRVYWSGLGWWSFGQGSTSS-PWGEKLTRPRVSKE 297

Query: 301 PESW-LKMVRKN-GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEM------LAG 351
            + W +K    N   +++ + F+  E   DE +M+GLRL+EG+ +K+ ++          
Sbjct: 298 YKEWVIKQYEVNLDSSLINRNFVYKE--LDEKIMLGLRLKEGVDIKEVFKEQNWENKKFE 355

Query: 352 RNLDIECE--RNLQRQGFIERVQFSRLRCT-QRGMTMLDSVI 390
            N     E        G + + + +R   +  +GM + + ++
Sbjct: 356 SNFSKLIEEWEKFLESGLLVK-KGNRFFLSDPKGMELSNQIL 396


>gi|33596577|ref|NP_884220.1| coproporphyrinogen III oxidase [Bordetella parapertussis 12822]
 gi|33573278|emb|CAE37259.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella
           parapertussis]
          Length = 474

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 157/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y  A       +    + +YVH PFC   C YC  N  V R+      ++ +   E+  
Sbjct: 52  DYHQALAERTASRRGEPMSLYVHVPFCDSVCYYCACNKVVTRHHERAAPYLDALGQELAL 111

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +  G    +S +  GGGTP+ +    +  ++  +   +T++ + E++IE +P + +  
Sbjct: 112 QVEALGSGEPVSHLHLGGGTPTFLSDAELTRLMAMLRGAFTLTPDAEVSIEVDPRTADRG 171

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
                R+ G NR+S GVQ  + +  + + R     +    +  AR   F  ++ DLIY L
Sbjct: 172 RLAHLRELGFNRLSFGVQDFDPRVQQAVHRVQPFEDVRQLMLAARELGFGSINVDLIYGL 231

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  +   +++      D ++LY         F    +     LP  +  V L    
Sbjct: 232 PHQTLASFARTVEQVGELRPDRIALYAYAHLPQ-RFASQRRILAADLPDASTRVGLLGDA 290

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
            +     G     + + +           E   + N+  Y     GD I +G  A  +V 
Sbjct: 291 IAGFLELGYVYIGMDHFALPDDALAVARREGRLHRNFQGYTAQPDGDLIALGVSAIGKVG 350

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                V     K  +++   + +    +     LS++ +    L+M +  R  +++ +  
Sbjct: 351 N----VYSQNVKTLDAYYGALAQARLPIERGLRLSADDELRRRLIMAVMCRGRLALAELG 406

Query: 348 MLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             AG         ++   R L   G +  +    ++ T+ G   + +V
Sbjct: 407 GSAGAPASAAFGPELARLRELAGLGLVT-LDAEVIQVTELGWYFVRAV 453


>gi|109897429|ref|YP_660684.1| coproporphyrinogen III oxidase [Pseudoalteromonas atlantica T6c]
 gi|109699710|gb|ABG39630.1| coproporphyrinogen III oxidase, anaerobic [Pseudoalteromonas
           atlantica T6c]
          Length = 455

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 75/408 (18%), Positives = 159/408 (38%), Gaps = 25/408 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + + N      + +L +YVH PFC   C YC  N  V + +     +++  + E++   +
Sbjct: 38  ADFLNAAEQSDNKNLSLYVHIPFCHYLCYYCGCNKIVTQLQTKANVYLKHLIEEIKQQAK 97

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             G ++++ + FGGGTP+ +    +  +++ +  ++  +++ +I+IE +P  + V     
Sbjct: 98  HFGAKAVTHLHFGGGTPNFLTDDQLLQLMNELKTHFYFTTDAQISIEIDPRDMTVGRIDA 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
               G NR+S+G+Q  + +  + + R  +     + +  A+   F  ++ DLIY LP QT
Sbjct: 158 MADMGFNRLSIGLQDTDPKVQKAINRVQSTELIASLVARAKERHFRSVNLDLIYGLPFQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+   +  V+ +SL+         F    K     LP     + L +L     
Sbjct: 218 PESFANTLEAVHAMQVERVSLFSYAHLPE-RFAAQRKLSVDALPDTEQKLALMHLAVDKL 276

Query: 244 SAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSH 291
           +  G     I + +    E   +  N     N+  Y      D +G+G  A S V     
Sbjct: 277 TQFGYQFIGIDHFALPNDELALAQQNNSLMRNFQGYTTGQNTDLLGLGVSAISAVGESYS 336

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +     +K    +   +     A+ +   LS + +    ++  +     +      +   
Sbjct: 337 QN----QKGLADYYYAIEHQKSALEKGLKLSKDDRIRRRVISDIMCNSMVDKTAISVCFD 392

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            + D      L       + G +  +  + L    +   +L S+    
Sbjct: 393 IDFDEYFASELRGLTMFIQDGLMLNLPHA-LYVQPKAQLLLRSICMAF 439


>gi|56459301|ref|YP_154582.1| coproporphyrinogen III oxidase [Idiomarina loihiensis L2TR]
 gi|56178311|gb|AAV81033.1| Coproporphyrinogen III oxidase [Idiomarina loihiensis L2TR]
          Length = 453

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 166/399 (41%), Gaps = 30/399 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            ++ L +Y+H PFC K C YC  N  + R++   + ++     EM   + +   + I  I
Sbjct: 46  ANDGLCLYLHLPFCHKLCYYCGCNKVITRHQHKADKYLDYLAGEMAMYQPMVRDKKIRQI 105

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ +  Q +  +++ + +++T + N E++IE +P S      +  RK G NR+S
Sbjct: 106 HLGGGTPTFLTEQQLTRLMELVHQHFTFAENPEVSIEIDPRSCSDEKLRHLRKLGFNRVS 165

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  +++    + R  +       + L++   F  ++ DLIY LP Q    ++  +++
Sbjct: 166 YGVQDFDKKVQIAINRVQDIELIAHQLKLSKELGFESINLDLIYGLPYQRPETFKKSIEQ 225

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D +S++         F    K  +  +P  +V + L     +  +  G     +
Sbjct: 226 VIEMDPDRISVFSYAHLPQ-RFAGQKKIPEESIPQPSVKLSLLEQAITQLNDAGYQFIGM 284

Query: 254 SNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           E     N+  Y        +G+G  + S+V      V    EK  
Sbjct: 285 DHFAKKDDGLAIAQREGRLQRNFQGYTTDGQDALLGLGVSSISQVNG----VLWQHEKEL 340

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD------ 355
            ++ KM+      +++   L+ E +    L+  +     + ++ ++     +LD      
Sbjct: 341 PAYYKMIDNGQKPIIKSMALNDEDKLRAALISQVICHFELDIEAFKA--EWDLDDFWAHF 398

Query: 356 ---IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
              I   +     G ++ V   +LR T  G   + S+ A
Sbjct: 399 AEAIPLLKPFIEDGLVD-VSDKKLRVTDLGRLWVRSICA 436


>gi|145588903|ref|YP_001155500.1| oxygen-independent coproporphyrinogen III oxidase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047309|gb|ABP33936.1| coproporphyrinogen III oxidase, anaerobic [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 471

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 145/410 (35%), Gaps = 30/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A +     +    L +Y H PFC   C YC  N  + +       +I+    EM  
Sbjct: 49  DYLGALQR--ISKVDEPLSLYFHLPFCPNICYYCGCNKIITKDHGRSAKYIKYLAKEMAM 106

Query: 62  MRQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +    G +    I+ + +GGGTP+ +  + +  ++     ++ +    E +IE +P  V 
Sbjct: 107 VSAAMGAQKKIPITQLHWGGGTPTFLSHEEMVELMHHTRTHFELLPGGEYSIEIDPRRVT 166

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
             +       G NRISLGVQ         + R     E  A +  +R   F   S DLIY
Sbjct: 167 EQDIALLADLGFNRISLGVQDFNLAVQEAVHRVQTIEETQAVMDWSRKYGFKSRSVDLIY 226

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQT   ++  +   L    D LS+Y        +F    +  +  LP     +D+ +
Sbjct: 227 GLPKQTPETFKETVDAVLKMNPDRLSVYNYAHLPH-IFKPQRRISEADLPPAADKLDILS 285

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
            T +     G     + + +           E   + N+  Y      D +  G  +  +
Sbjct: 286 NTIARLGEAGYVFIGMDHFAKPDDELAIAQKEGKLHRNFQGYSTQAECDLLAFGISSIGK 345

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     +      +  + +   +      V+    L  +      L+  L  +  ++   
Sbjct: 346 VDDCYSQNV----RTLDEYYAAIDDGHLPVLRGLQLDKDDLLRRELIGELMCQFALNTAS 401

Query: 346 WEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +  L   +            ++L+  G +E      +    +G  +   V
Sbjct: 402 FSKLHQIDFAKYFSIELNELKSLEEAGLLEWHGDDIVVPI-KGRLLARRV 450


>gi|220934411|ref|YP_002513310.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219995721|gb|ACL72323.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 465

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 82/401 (20%), Positives = 155/401 (38%), Gaps = 28/401 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           +      L +YVH PFC   C YC  N  V + +     ++     E+     L    R 
Sbjct: 52  SNASGRPLSLYVHIPFCDTVCYYCACNKVVTKDRGRARPYLDRLYREIGLQAALFDNSRP 111

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ I  + +  ++  ++ ++ +      E  IE +P  V  +     R+ 
Sbjct: 112 VEQLHLGGGTPTFISHEEMTELMTILSSHFQLLDDDTGEYGIEIDPREVGGDTLALLRRL 171

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ  + +  R + R   AS+ +  +  AR   F  +S DLIY LP QT   +
Sbjct: 172 GFNRLSLGVQDFDPRVQRAVNRIQPASQTLHVLEEARQVGFRSISVDLIYGLPLQTPASF 231

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            + ++R +    D +S++         F    +  +  LPS    + +   T +  +  G
Sbjct: 232 AVTVERMIEAGPDRISVFNYAHLPE-RFKPQRRINEQDLPSPADRLLILQQTIAQLTEAG 290

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E     N+  Y      D IG+G  +   V+    +   
Sbjct: 291 YVYIGMDHFARPDDELAVAQREGTLYRNFQGYSTHAHCDVIGLGVTSIGMVQDCYAQN-- 348

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL- 354
             +   E +   +     AV     L ++ +    ++  L     +  +D E   G    
Sbjct: 349 --QHDLERYYARIDAGELAVFRGVELDADDRLRRDVITALICHFRLDFRDLESRHGIVFW 406

Query: 355 -----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                ++E    +Q  G IE      ++ + +G  ++ ++ 
Sbjct: 407 DYFECELEALAPMQADGLIELNDSG-IQVSPKGRLLIRNIC 446


>gi|167580894|ref|ZP_02373768.1| coproporphyrinogen III oxidase [Burkholderia thailandensis TXDOH]
          Length = 464

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 34/407 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 43  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 100

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 101 QAALFDPERTVTQLHWGGGTPTFLSQAETTELMAATREYFTLASDRTGEFSIEIDPRAAS 160

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 161 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 220

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 221 GLPHQTVSSFARTLDTIIELEPDRLSVFGYAHMPH-LFKMQRQIDAAALPPPATRIALLG 279

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 280 LAIEQLTRAGYVYIGMDHFARPDDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 339

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +V    LS++ +    ++  L     +    
Sbjct: 340 VGDVYAQNA----KDLPRYGAALADQRLPIVRGVKLSADDRLRRDVITHLMCNLVLPFSH 395

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCT--QRGMT 384
            E   G         +++  R  +R G +        R T    G  
Sbjct: 396 VEAAYGIRFANKFSSELDTLRGFERDGLLSIGAD---RLTIHPAGRL 439


>gi|307730728|ref|YP_003907952.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
 gi|307585263|gb|ADN58661.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1003]
          Length = 461

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 83/389 (21%), Positives = 147/389 (37%), Gaps = 31/389 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A  +   G  +  L +Y H PFC   C YC  N    + +     +++    E+   
Sbjct: 41  YLRAAAD--PGASALDLSLYFHIPFCDTVCFYCGCNKIATKNRAHARPYLERLKREIVLQ 98

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEV 119
                  R +S +  GGGTP+ +    +A +L    +++        E +IE +P     
Sbjct: 99  AACFDTRRPVSQLHLGGGTPTFMSNDELAELLATAREHFAFVPDDEAEYSIEVDPREASP 158

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 RK G NR+SLGVQ  +    + + R        + +  AR+  F  +  DLIY 
Sbjct: 159 ETIAHLRKLGFNRLSLGVQDFDPLVQKAINRIQPLDMTASVMQAARHAGFHSIGVDLIYG 218

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  +   L   +  A D LS++        LF    +     LPS  + + +   
Sbjct: 219 LPHQTVESFSRTLDTMIELAPDRLSVFAYAHMPQ-LFKMQRRMDAATLPSPAMRLAILQR 277

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
                S  G     + + +    E        +LH  N+  Y      D IG G  +  +
Sbjct: 278 VVERLSTAGYVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIGK 336

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K   ++   +     A+     LS++ +    ++  L     +   +
Sbjct: 337 VGDVYAQNA----KELPAYAAAIDAGKLAITRGVRLSADDRLRRDIITQLMCNLELRFDE 392

Query: 346 WEMLAGRNL------DIECERNLQRQGFI 368
           +E + G +       ++E  R  ++ G +
Sbjct: 393 FEAMYGIHFADTFEPELERLRGFEQDGLV 421


>gi|33601130|ref|NP_888690.1| coproporphyrinogen III oxidase [Bordetella bronchiseptica RB50]
 gi|33575565|emb|CAE32643.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella
           bronchiseptica RB50]
          Length = 474

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 157/408 (38%), Gaps = 26/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y  A       +    + +YVH PFC   C YC  N  V R+      ++ +   E+  
Sbjct: 52  DYHQALAERTASRRGEPMSLYVHVPFCDSVCYYCACNKVVTRHHERAAPYLDALGQELAL 111

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +  G    +S +  GGGTP+ +    +  ++  +   +T++ + E++IE +P + +  
Sbjct: 112 QVEALGSGEPVSHLHLGGGTPTFLSDAELTRLMAMLRGAFTLTPDAEVSIEVDPRTADRG 171

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
                R+ G NR+S GVQ  + +  + + R     +    +  AR   F  ++ DLIY L
Sbjct: 172 RLAHLRELGFNRLSFGVQDFDPRVQQAVHRVQPFEDVRQLMLAARELGFGSINVDLIYGL 231

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  +   +++      D ++LY         F    +     LP  +  V L    
Sbjct: 232 PHQTLASFARTVEQVGELRPDRIALYAYAHLPQ-RFAPQRRILAADLPDASTRVGLLGDA 290

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
            +     G     + + +           E   + N+  Y     GD I +G  A  +V 
Sbjct: 291 IAGFLELGYVYIGMDHFALPDDALAVARREGRLHRNFQGYTAQPDGDLIALGVSAIGKVG 350

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                V     K  +++   + +    +     LS++ +    L+M +  R  +++ +  
Sbjct: 351 N----VYSQNVKTLDAYYGALAQARLPIERGLRLSADDELRRRLIMAVMCRGRLALAELG 406

Query: 348 MLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             AG         ++   R L   G +  +    ++ T+ G   + +V
Sbjct: 407 GSAGAPASAAFGPELARLRELAGLGLVT-LDAEVIQVTELGWYFVRAV 453


>gi|330831496|ref|YP_004394448.1| Coproporphyrinogen III oxidase oxygen-independent [Aeromonas
           veronii B565]
 gi|328806632|gb|AEB51831.1| Coproporphyrinogen III oxidase oxygen-independent [Aeromonas
           veronii B565]
          Length = 457

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 154/386 (39%), Gaps = 22/386 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +L +YVH PFC K C YC  N  + R++   + ++     E++    L   R ++ +
Sbjct: 49  PERNLSLYVHIPFCHKLCYYCGCNKVITRHQHKADEYLDYLEQEIKAQAPLFKHRMVTQL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+ ++      ++  + +++  +   E +IE +P  + +      R  G NRIS
Sbjct: 109 HWGGGTPTYLDEAQTRRLMAMLREHFHFAEEGEFSIEVDPREIAITMLDVLRDVGFNRIS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ   +     + R  +     A +  AR   F   + DLIY LP Q    +   L+ 
Sbjct: 169 LGVQDFNKDVQVAVNREQDNDFIKAMLERARELGFRSTNLDLIYGLPHQDRASFHHTLEE 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L      LS++       + F    K  ++ +P+    + +   T +  +  G     +
Sbjct: 229 VLKTDPARLSIFNYAHLP-SRFAAQRKLKEVDMPAPQEKLAMLQDTIAFLTGQGYQFIGM 287

Query: 254 SNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           E   + N+  Y      D +G+G  + S +     +     +K  
Sbjct: 288 DHFAKPDDELAVAQREGKLHRNFQGYTTQGDCDLLGLGVSSISMIGDAYSQN----QKEL 343

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           +++   V + GHA  +   L+ +      ++  L     ++    E   G N       +
Sbjct: 344 KTYYAQVAELGHAQWKGCSLNQDDLIRREVIKRLICDFRLNFAAVEQAHGLNFREYFADD 403

Query: 362 LQRQGFIER-VQFSRLRCTQRGMTML 386
           L+    ++  +    +R T+ G+ + 
Sbjct: 404 LK---LLQTFINDGLVRMTEDGLEVS 426


>gi|186475369|ref|YP_001856839.1| coproporphyrinogen III oxidase [Burkholderia phymatum STM815]
 gi|184191828|gb|ACC69793.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           phymatum STM815]
          Length = 470

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 83/379 (21%), Positives = 143/379 (37%), Gaps = 29/379 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
           G     L +Y H PFC   C YC  N  V R +     ++Q    E+    +     R +
Sbjct: 58  GASETDLSLYFHIPFCDTVCFYCGCNKVVTRNRSRSAPYLQRLKREIALQAECFDTARPV 117

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
           S + +GGGTP+ +    +  ++    +++ + S+   E +IE +P           R  G
Sbjct: 118 SQLHWGGGTPTFLSHDEMTELMATTREHFLLRSDAEGEFSIEVDPREAPPKTIVHLRNLG 177

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +    R + R          +  AR   F  +  DLIY LP QT++ + 
Sbjct: 178 FNRLSLGVQDFDPVVQRAINRIQPLEMTAGVMRAARATGFHSIGVDLIYGLPYQTVSSFS 237

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L   L  A D LS++        LF    +     LPS    + +  L     +  G 
Sbjct: 238 KTLDTMLELAPDRLSVFGYAHMPQ-LFKMQRQMDASTLPSPAERLAILQLVVERLTDAGY 296

Query: 249 HAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
               + + +    E        +LH  N+  Y      D IG G  +  +V     + A 
Sbjct: 297 VYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIGKVGDVYAQNA- 354

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL- 354
              K    +   + +   A+     LS++ +    ++  L     +   ++E + G    
Sbjct: 355 ---KDLAGYAAAIDEGELAITRGVRLSTDDRLRRDIITQLMCNLELRFDEFEAVYGIRFQ 411

Query: 355 -----DIECERNLQRQGFI 368
                ++E  R  +  G +
Sbjct: 412 DTFAPELERLRAFEDDGLV 430


>gi|253998540|ref|YP_003050603.1| coproporphyrinogen III oxidase [Methylovorus sp. SIP3-4]
 gi|253985219|gb|ACT50076.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           SIP3-4]
          Length = 464

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 81/408 (19%), Positives = 158/408 (38%), Gaps = 30/408 (7%)

Query: 5   SAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +A+++ +         + +Y H PFC   C YC  N    R     E +++  L EM  +
Sbjct: 34  AAWQHELQASRDSGRDISLYAHIPFCDTLCYYCGCNMVATRDYSKAERYLEVLLQEMALV 93

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               +  R +  + +GGGTP+ ++P ++  +    A+ + ++ + EI  E +P  +   +
Sbjct: 94  ADTASADRLVRQMHWGGGTPTYLKPDDLVKLHQAFARRFRMADDAEIGCEMDPRELTRAH 153

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
                  G NR+SLGVQ L+ Q    + R  +           R+     ++FDLI  LP
Sbjct: 154 VDALASCGFNRLSLGVQDLDTQVQEAINRIQSQDLIEQVYGWIRDAGINSINFDLIIGLP 213

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT  ++   L   ++ A D L+++        +        +  LP+ +  ++L  +T 
Sbjct: 214 HQTPERFARTLDAVIAMAPDRLAVFNYAHVP-WMKKHQRLIPEAALPTLDQRLELLRMTL 272

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
              +A G     + +++    E        SL+  N+  Y      D + +G  A S+ K
Sbjct: 273 DRLTAAGYVHIGMDHYAKPEDELVRAQQQGSLYR-NFQGYTTHKDCDILALGASAISQTK 331

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      K    +   V      +     ++ E Q     +  +     +  + + 
Sbjct: 332 NAYAQNT----KVLSEYRDAVTAGRLPIERGLHVTPEDQLRRAAITQMMCELRLDKRAFS 387

Query: 348 MLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
                + D      L      Q+ G +  +Q   LR T+ G   L ++
Sbjct: 388 AAWNIDFDDYFAAALPQMEEMQQDGLLA-LQGDELRVTEIGRLFLRNI 434


>gi|239616730|ref|YP_002940052.1| oxygen-independent coproporphyrinogen III oxidase [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505561|gb|ACR79048.1| oxygen-independent coproporphyrinogen III oxidase [Kosmotoga
           olearia TBF 19.5.1]
          Length = 382

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/380 (26%), Positives = 188/380 (49%), Gaps = 13/380 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G+Y+H PFC +KC YCDF +         E + ++ L+E++          + +++F
Sbjct: 2   KEVGIYIHLPFCKRKCDYCDFLTLPFDADQA-ETYNKALLSEIELWTS-NNELMLKTLYF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+PSL +P+ +  ++D +A +       E+T+EANP  +   N + +++ GVNR+S+G
Sbjct: 60  GGGSPSLYQPRFLEKLIDRLAFSSQF-QVEELTLEANPWEITCENLRDWKELGVNRLSIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   + L  +GR  N  + +  +  AR  F  ++FD I  LP ++   +E  ++    
Sbjct: 119 IQTAPTEVLNNVGRK-NPVDLLRRLGFAREAFDNVNFDFILGLPGESRETFENNIKLIER 177

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  +H+S Y L  +  T   +    G + LPS ++  +L+          G + YEIS+ 
Sbjct: 178 FLPEHISYYILDTDHDTPLMRRVLTGKIELPSVDLITELHEHLIKTLEEKGYNRYEISSW 237

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S  G + +HN NYW  G+Y+G+G  A        +    S  +    ++K +     A  
Sbjct: 238 SREGYQCIHNKNYWENGEYVGLGISAGGHFNRFRYVNTTSFSE----YVKAMNVGHFARE 293

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQFS 374
            +   +  ++  E L MGLRL EG+ +  +++    +L  +    +++  +GF+  V   
Sbjct: 294 YEHQNNDLEELFETLFMGLRLVEGVRISRFQV--NESLLEKVVERIEKSLEGFV-IVDNE 350

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R++   RG+ +   V   L 
Sbjct: 351 RIKLNDRGLDLSKVVFERLM 370


>gi|332533758|ref|ZP_08409616.1| coproporphyrinogen III oxidase, oxygen-independent
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036813|gb|EGI73275.1| coproporphyrinogen III oxidase, oxygen-independent
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 457

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/402 (20%), Positives = 163/402 (40%), Gaps = 32/402 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             LSA E++     S SL +Y+H PFC + C YC  N  + R++   + ++     E+  
Sbjct: 39  DLLSAIESST----SRSLSLYIHIPFCSQLCYYCGCNKIITRHQSKADTYLDFLAKEITA 94

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L    ++  +  GGGTP+ +  + +  ++  + +++  +   E  IE +P S+  N 
Sbjct: 95  QAPLFKSYTVEQLHLGGGTPTFLTAKQMTRLIKLLEQHFNFTRTTERGIEIDPRSLADNM 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
               R  G NR+S G+Q   +     + R  NA      I  AR   F  ++ D+IY LP
Sbjct: 155 LVDLRMLGFNRVSFGIQDFNDDVQLAVNRPQNADTVKQLITQARELGFQSINADMIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   ++  +++ +  + D +S++         F    K  D  LPS +  + ++  T 
Sbjct: 215 LQTPESFKKTIEQLIELSPDRVSVFNYAHLPE-RFAAQRKIKDADLPSAHNKLTMFKNTL 273

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
              +  G     + + +    E         LH  N+  Y      D +G+G  + S++ 
Sbjct: 274 EQMTQAGYQFIGMDHFAKTDNELAVAQNEGKLHR-NFQGYTTHGNCDLLGLGVSSISQIG 332

Query: 288 VGSHRVAISIEKHPESWLKMVR-KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                  +  +K  + +   V  ++G A+ +   L+ +       +  L  +  + ++D+
Sbjct: 333 TA----ILQNQKELKHYYHSVETQSGSALNKGMHLTHDDVIRADAIKQLICQFELDIQDF 388

Query: 347 EMLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRG 382
                   +   E        L +   +  +   ++  T RG
Sbjct: 389 SEKHALIFNDYFEDALVALAPLIKDELVTIIDN-KISVTPRG 429


>gi|269469011|gb|EEZ80577.1| hypothetical protein Sup05_1371 [uncultured SUP05 cluster
           bacterium]
          Length = 400

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 83/366 (22%), Positives = 150/366 (40%), Gaps = 19/366 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +++ +  N + +Y H PFC   C YC  N  V + K   E ++Q    E+    +L  
Sbjct: 39  QASLSNERKNPISLYCHIPFCDTVCFYCGCNKVVTKDKGKAEPYLQRLFKEIDRQAKLFD 98

Query: 68  P-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R +  + FGGGTP+ +    I  + + +   +  +   E +IE +P  V+ N  +   
Sbjct: 99  STRVVEQMHFGGGTPTFLSNDQILALSEKLQSAFNFAQEGEYSIEIDPRGVDENTIKALA 158

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
           KA  NRISLGVQ    Q  + + R  +  +  + I  AR N F  +S DLIY LPKQ++ 
Sbjct: 159 KARFNRISLGVQDFNSQVQKAVNRIQSFEQTKSVIEFARANGFESISIDLIYGLPKQSVQ 218

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +E  L +      D +SL+        LF    +     LPS +  + ++  +     +
Sbjct: 219 TFETTLNQVAQLRPDRISLFNYAHLPE-LFKPQRRINVDELPSADEKLAIFKYSMDFLLS 277

Query: 246 HGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
            G     + + +           E     N+  Y      D +G+G  A  +V     + 
Sbjct: 278 EGYVYIGMDHFALPQDPLAIAQNEGQLYRNFQGYSTHAQCDIVGLGLSAIGQVGDSFSQN 337

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
               EK+ E++ + +      +V+ + ++ + +    ++M L     +     E   G  
Sbjct: 338 ----EKNLEAYYQRIDAGELPIVKGQIINEDDKIRRAVIMDLICHFELDFSKVEKHFGIV 393

Query: 354 LDIECE 359
                 
Sbjct: 394 FTDYFA 399


>gi|319785982|ref|YP_004145457.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464494|gb|ADV26226.1| oxygen-independent coproporphyrinogen III oxidase
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 466

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 154/409 (37%), Gaps = 35/409 (8%)

Query: 4   LSAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L A      G      + +Y+H PFC   C YC  N  + R K     ++     E+  +
Sbjct: 41  LRAVAAASNGDPIPRPISLYLHVPFCTSPCFYCGCNRIITRDKARGAAYLTRLYREIGMV 100

Query: 63  RQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEV 119
            +L    R +  + FGGGTP+ +EP  IA ++D + +++  +     + +IE +P  +  
Sbjct: 101 AELFDRDRDVEQVHFGGGTPNFLEPAQIAEVMDVLRRHFHFAPGARMDCSIELDPRFITP 160

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
                   AG NR SLGVQ  +    + + R     + +  I   R + F  ++ DLIY 
Sbjct: 161 AEVGELAAAGFNRASLGVQDFDPVVQQAVNRVQGVEQTLGIIEACRTHGFRSVNVDLIYG 220

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQT+  +E  L   L    D L++Y        LF    +     LPS    +DL  L
Sbjct: 221 LPKQTLEGFERTLDTTLQVRPDRLAIYGYAHLPN-LFRPQQRIHAEDLPSAEQKLDLLRL 279

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
                   G     + + +    E         LH  N+  Y      D +G+G  A S 
Sbjct: 280 AIEKLGQAGYEYIGMDHFALPTDELARAQRDGGLHR-NFMGYTTHAESDLVGLGVSAISH 338

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           +     +      +    W + + +    V     +  +      ++  L     +    
Sbjct: 339 IGASFSQN----PRDIGGWEQAIDEGRLPVWRGMRMDEDDVIRADVIQQLMCHGRLDYDA 394

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
                  D+       L  E  + LQ  G +E      L+ TQRG  +L
Sbjct: 395 LGRRHVIDFRDYFAEAL--ERLQPLQADGLVELGGHG-LQATQRGRLLL 440


>gi|194335858|ref|YP_002017652.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308335|gb|ACF43035.1| oxygen-independent coproporphyrinogen III oxidase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 472

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 81/394 (20%), Positives = 168/394 (42%), Gaps = 23/394 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +  ++++ L E Q    +   R ++  +
Sbjct: 49  TTGISLYIHIPYCENHCYFCGCNAHRTQDHSYEAPYLEALLKEWQMYTDVFPGRLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DGI KN     N   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFFSPENLVTLIDGICKNVNKMDNYMFSFETNPRSTSKEHLEALYSVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       + +AR I F  ++FDL+Y LPKQTM      +Q+
Sbjct: 169 FGIQDFDPIVQEEINRLQSFELVKEKVDIARQIGFTSINFDLVYGLPKQTMATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +   +LY+   ++  + G H   +
Sbjct: 229 VMELKPDRLAFYAYG-HNPHMYEGQRKFKESDLPVGDAKQELYDKGSAMLESIGYHEIGM 287

Query: 254 SNHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G ++L+        + N+  Y +      + +G  + S     +       E++
Sbjct: 288 DHFAIEG-DALYIAAKNGTLHRNFMGYTENTTQMMLALGSSSIS----DTWYAFAQNERN 342

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECE 359
              ++K+V +    +     L+ E       ++ L  ++  S +D ++     ++ +   
Sbjct: 343 DIEYIKVVNEGRFPLHRGHLLTDEDLVLRRHILNLMCKQETSWEDPKLYTDELDIALYRL 402

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++Q  G +     S +R T+ G+  L ++    
Sbjct: 403 EDMQNDGIVVLGDKS-VRVTEAGIPFLRNICMAF 435


>gi|260911686|ref|ZP_05918265.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634183|gb|EEX52294.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 343

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/332 (28%), Positives = 174/332 (52%), Gaps = 14/332 (4%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKN------WTVSSNVEITIEANPSSVEVNNFQ 123
           +I +I+ GGGTPS +  +N+  + D I         + +S   E+T+E NP  +     Q
Sbjct: 17  TIDTIYLGGGTPSQLSQENLLRLFDAIYNKVEQVPTFHISPTAEVTMECNPDDLTPQFAQ 76

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQ 182
              +  VNR+S+GVQ+  ++ L FL R H A++   AI   R +    +S DLI+  PKQ
Sbjct: 77  TIARLSVNRVSMGVQTFSDERLNFLRRRHKAADIEPAIQRLRQVGIGNISIDLIFGFPKQ 136

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+ +W  +LQ+A+   V+H+S Y L  E+GT  +++ +   +   +++ ++D++NL    
Sbjct: 137 TVNEWATDLQKAIELDVEHISAYSLMYEEGTPLFRLLEQQRVSEIADSQSLDMFNLLVDT 196

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            + +    YEISN +  G  S HN +YW+   Y+G+GP AHS           ++ K+ +
Sbjct: 197 LTTNHYEHYEISNFAREGFRSRHNASYWQGIPYLGLGPSAHSYDGNSRQWNVSNLRKYMD 256

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           +      +NG   +EKE L  + + ++++   LR +EG+ +          L    E +L
Sbjct: 257 AI-----ENGMVPMEKETLDEDTKYNDWITTALRTKEGLDLNLLSEAHREYLLRAAEPHL 311

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            R+G +     + +  ++ G+ + DSV+++L 
Sbjct: 312 -REGNLVLTNNN-IALSRAGIFISDSVMSDLV 341


>gi|124515861|gb|EAY57370.1| Oxygen-independent coproporphyrinogen III oxidase [Leptospirillum
           rubarum]
          Length = 459

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/409 (21%), Positives = 152/409 (37%), Gaps = 28/409 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A + +        L +Y H PFC   C +C  ++ + R K    ++I     E+  
Sbjct: 37  EYQQAIDRSNRAL-EKPLSLYFHIPFCEMLCYFCGCSTIISRDKGKAADYIDVLGAEIAL 95

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEV 119
           +  +    R +  + FGGGTPS + P    ++   I + + V     EI+IE +P     
Sbjct: 96  LGNRFPKSRKVVQLHFGGGTPSSLTPAQNRILFSHINRWFDVDYREGEISIEIDPRHASD 155

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +  +  R+ GVNRIS+GVQ  +    + + R              R   F  ++ DLIY 
Sbjct: 156 DYLETVRELGVNRISMGVQDFDPVVQKAVNRIQPVELTEKVYRKVRELGFHSINIDLIYG 215

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  +E  L   +  + D L+++        L   M    +  LP   V  +L  L
Sbjct: 216 LPFQTVKGFEKTLDEIIRMSPDRLAIFNYAHVP-WLKKHMVLIRETDLPRPEVKFELMEL 274

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRV 286
                +  G     + + +    E   +  N     N+  Y      D +GIG  + S V
Sbjct: 275 IGEKLTNAGYVYIGMDHFAKPDDELTRAQANRTLYRNFQGYTTKAQADLVGIGVTSISMV 334

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK+   +   V            LS + Q    ++  +     +     
Sbjct: 335 GD----VYAQNEKNLPDYQTKVLSGQIPTHRGYRLSKDDQIRRSVITRIMCDLEVDRVHV 390

Query: 347 EMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSV 389
               G   D      LQ      + G +E ++  R+  T  G   + ++
Sbjct: 391 LDPFGEEFDHYFAPELQELEGFAQDGLLE-MKKDRIVLTPLGRIFMRNI 438


>gi|296157130|ref|ZP_06839966.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
 gi|295892466|gb|EFG72248.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           Ch1-1]
          Length = 461

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/390 (21%), Positives = 146/390 (37%), Gaps = 31/390 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL +  +   G  S  L +Y H PFC   C YC  N    + +     ++     E+  
Sbjct: 40  DYLRSAAD--PGASSTDLSLYFHIPFCDTVCFYCGCNKVATKNRAHARPYLAQLKREIAL 97

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
                   R +S + +GGGTP+ +     A ++    +++ +  +   E +IE +P    
Sbjct: 98  QAACFDTRRPVSQLHWGGGTPTFLSHDETAELMAATREHFMLLPDAEAEYSIEVDPREAS 157

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  RK G NR+SLGVQ  +    + + R        + +  AR+  F  +  DLIY
Sbjct: 158 PETIAHLRKLGFNRLSLGVQDFDPVVQQAINRIQPLEMTASVMQAARDTGFHSIGVDLIY 217

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L   +  A D LS++        LF    +     LPS +V + +  
Sbjct: 218 GLPHQTVESFSRTLDTMIELAPDRLSVFAYAHMPQ-LFKMQRQMDPATLPSPDVRLAILQ 276

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHS 284
                 +  G     + + +    E        +LH  N+  Y      D IG G  +  
Sbjct: 277 RVVERLTGAGYVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIG 335

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V     + A    K    +   +     A+     LS++ +    ++  L     +   
Sbjct: 336 KVGDVYAQNA----KDLPGYAAAIDSGKLAIRRGVRLSADDRLRGDVITQLMCNLELRFD 391

Query: 345 DWEMLAGRNL------DIECERNLQRQGFI 368
           ++E   G         ++E  R  ++ G +
Sbjct: 392 EFEAAYGIRFAETFEPELERLRGFEQDGLV 421


>gi|317471382|ref|ZP_07930736.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
 gi|316901133|gb|EFV23093.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
          Length = 272

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 99/265 (37%), Positives = 147/265 (55%), Gaps = 3/265 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +  L +Y+H PFC KKC YCDF S          ++I+    E+    +L    S+S++
Sbjct: 2   KTRELELYLHIPFCKKKCSYCDFCSFPAGDDE-ISSYIRKLRQEILHWGRLLKRPSVSTV 60

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           F GGGTPSLI    I  +++ +  +++ + N+E TIEANP +V       Y+  G+NRIS
Sbjct: 61  FIGGGTPSLIPGAQIESLMNTVRDSFSCAENMECTIEANPGTVTREKLSAYQNCGINRIS 120

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+QS  E+ L+ LGR H   + ++  ++AR+  F  ++ DL+ A+P QTM   E  L +
Sbjct: 121 FGLQSAREEELKILGRIHTFEDFVSGFYMARDCGFQNINVDLMNAVPMQTMESMEQTLLK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 +HLS+Y L IE+GT FY M    DL LP+E+    +Y  T+ I    G   YE+
Sbjct: 181 TAELEPEHLSVYSLIIEEGTPFYDMKGLDDL-LPTEDEDAAMYERTEKILHTLGYERYEL 239

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGI 278
           SN++  G E  HN  YW    Y+GI
Sbjct: 240 SNYARPGYECRHNCGYWTGKPYLGI 264


>gi|289548773|ref|YP_003473761.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
 gi|289182390|gb|ADC89634.1| oxygen-independent coproporphyrinogen III oxidase [Thermocrinis
           albus DSM 14484]
          Length = 456

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 162/398 (40%), Gaps = 26/398 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
           + +    L +Y H PFC   C +C  N  +   K     ++     E++ + +L    R 
Sbjct: 45  SNETKRPLSLYFHIPFCESACWFCGCNVIISHRKDVTGRYLSYVTKELRMLAELLDTSRP 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ + PQ I  + D I +++  S + EI++E +P  ++    +  ++ G 
Sbjct: 105 VVQLHWGGGTPNFLSPQEIEELFDRIKEHFRFSQDAEISVEIDPRYLQEGQLETLKRLGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NRIS+G+Q + E   R + R    S     +   R+  F  ++ DLIY LP Q + +++ 
Sbjct: 165 NRISMGLQDINEDVQRAINRLQPESLMREVMKNLRDLGFSSINIDLIYGLPFQNVEKFKR 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGL 248
            +++ +    D ++++            + +  D   LP     + +  LT  +  + G 
Sbjct: 225 TIEKTIELDPDRVAVFNFAYVP--WLKPLQRKIDPSTLPPPEEKLSMLELTIEMFQSAGY 282

Query: 249 HAYEISNHSFLG---AESLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               + + +      AE+  N     N+  Y      D IGIG  +   ++    +    
Sbjct: 283 VYIGMDHFAKPNDELAEAQRNGTLWRNFQGYTTRKGVDLIGIGATSIGMLQDSYFQNY-- 340

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    +   + +   A +    LS E      ++M L      S    E + G   + 
Sbjct: 341 --KTIREYYAALDEGRLATMRGFLLSEEDLLRREVIMDLMCNFYCSFDKIEEMFGIRFEE 398

Query: 357 ECERNLQRQGFIERVQFSR-----LRCTQRGMTMLDSV 389
                L++   +E+    R     ++   RG  ++ ++
Sbjct: 399 HFAWELEQLSDMEKDDLLRISDRSIQVLPRGRLLIRNI 436


>gi|114776348|ref|ZP_01451393.1| coproporphyrinogen III oxidase [Mariprofundus ferrooxydans PV-1]
 gi|114553178|gb|EAU55576.1| coproporphyrinogen III oxidase [Mariprofundus ferrooxydans PV-1]
          Length = 479

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 78/402 (19%), Positives = 153/402 (38%), Gaps = 32/402 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP------ 68
            +  L +Y+H PFC   C YC  +  V +     E +++  L E+  +            
Sbjct: 62  DNTPLSLYIHIPFCNTVCYYCGCSKIVTKQYHRAEPYLELLLKEIDRVADCLKEADGTDC 121

Query: 69  -RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGY 125
            R ++ + FGGGTP+ +    +  I+  + + +        E +IE +P   + +  +  
Sbjct: 122 MRPVTQLHFGGGTPTFMNNDQMRTIMAKLRERFNFVAKDEGEFSIEIDPRECDEDTVRVL 181

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTM 184
           ++ G+NR+S+GVQ  +    + + R  +  E +  ++ AR + F  M+ DL+Y LP QT+
Sbjct: 182 QEIGLNRMSMGVQDFDPIVQKAVNRIQSKEETLRVLNEARAHGFESMNIDLMYGLPHQTV 241

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L   + ++ D ++L+        +F    +  +  LPS    +++   + +   
Sbjct: 242 DTFNTTLDTIIEFSPDRIALFNYAHLPH-MFMPQRRIDESALPSAQEKLNILEHSINKLL 300

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +           E     N+  Y      D IG+G  +   V  G  +
Sbjct: 301 DAGYVFIGMDHFAKPDDELTIAQQEGKLYRNFQGYSTQADCDLIGLGVTSIGYVGGGFFQ 360

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  ES+ + V      V     LS E      ++M L     +    +E   G 
Sbjct: 361 NR----KEMESYSEAVEAGEFPVFRGYILSEEDHLRRQVIMRLMCDFSLEYAQFEREFGI 416

Query: 353 NLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSV 389
                    L          +  ++   L     G  ++ +V
Sbjct: 417 VFKEHFADGLADLQEMSDDHLVELRDDGLSVLPAGRLLIRNV 458


>gi|116624996|ref|YP_827152.1| coproporphyrinogen III oxidase, anaerobic [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228158|gb|ABJ86867.1| coproporphyrinogen III oxidase, anaerobic [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 359

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 113/383 (29%), Positives = 166/383 (43%), Gaps = 36/383 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           GVYV +PFC +KC YC+F S V      +  ++ +   E++  +    P    +++ GGG
Sbjct: 3   GVYVSYPFCAQKCTYCNFASGVFPRDQ-EAPYLDALAREIRAHQWRWNP---DTVYLGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS + P  +  +LD            E T+EA P ++     + +  AG+NR+SLGVQS
Sbjct: 59  TPSNLAPVALRGLLD----LIPGRPWAEATLEAAPGNITPELARSWSDAGINRVSLGVQS 114

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  +R  GR H A    A I   R+   R ++ DLI  L  QT   W   L      A
Sbjct: 115 FSEPEIRRSGRKHTAQIVAAEIAALRDAGIRDINIDLIAGLAAQTADSWRESLDWIERLA 174

Query: 199 VDHLSLYQLTIEKGTLFYKM-----HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +H+S+Y L I++ +   K       + G L  PSE+   D Y       +  G+  YEI
Sbjct: 175 PEHVSVYMLEIDEDSRLGKELMLGGVRYGALDTPSEDATADFYEYAVERLAGIGIARYEI 234

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN +  G ES HNL YW    Y+G G  AHS      H+   S+  +     +       
Sbjct: 235 SNFARPGHESRHNLKYWCLEPYVGFGADAHSFDGSTRHQNPESLADYLAGTAQ------- 287

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGI--SVKDWEMLAGRNLDIECERNLQRQGFIERV 371
            V ++  LS      E L +GLRL  G+     +W+                  G +E  
Sbjct: 288 -VPDQPHLSD-----ERLFIGLRLSAGVRPDPDEWQRY------EAPIHRFLDAGLLE-T 334

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
               LR T RG+ + + V     
Sbjct: 335 SDGILRLTNRGVLLSNEVFQEFL 357


>gi|210633852|ref|ZP_03297867.1| hypothetical protein COLSTE_01784 [Collinsella stercoris DSM 13279]
 gi|210159021|gb|EEA89992.1| hypothetical protein COLSTE_01784 [Collinsella stercoris DSM 13279]
          Length = 478

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 15/311 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +Y+H PFC  KC YCDF+S        +     + +    ++           + +++ 
Sbjct: 8   ALYLHIPFCRAKCLYCDFDSRALTGCALEDAIGAYCEGLSAQVDAHGNAGELSEVETVYV 67

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL+  + +  ++D +         VE T EANP S  ++  Q  R AGV RISLG
Sbjct: 68  GGGTPSLLGDR-LVGLVDRVRAYC---EPVEFTCEANPESFTLDLAQALRAAGVTRISLG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL    L+ +GR H+A +A+ AI  A+      S D++  LP QT+  +   L+  ++
Sbjct: 124 VQSLNASELKAIGRVHSAEQAMFAIAQAKAAGFSTSCDVMCGLPGQTLDTFAETLRSLVT 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              DH+S+Y L +E GT   +M + G+  +P E+      +L   +    G   YE++++
Sbjct: 184 LNPDHVSVYPLQLEDGTPLARMEEAGETEVPDEDFQAQCMDLAAEVLKEAGYERYEVASY 243

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM--VRKNGHA 314
           +  G    HN+ YW    Y+G+G  A S + V               ++    V+K   +
Sbjct: 244 AKPGHRCRHNIAYWTGKSYLGLGRSAASMLDVCKGECRE------ARFIACPDVQKGEAS 297

Query: 315 VVEKEFLSSEQ 325
               E LS ++
Sbjct: 298 WTRGEALSPKE 308



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR--QGFIERVQF 373
            E E LS  +   E LM+  R+ +GIS        G   D E     Q+  +  +     
Sbjct: 392 FETEELSVREATAEDLMLACRMTDGISADLLARATGIIPDDELSIACQQAVEKGLAVWDG 451

Query: 374 SRLRCTQRGMTMLDSVI 390
             LR T  G    + + 
Sbjct: 452 GTLRPTHLGWLEGNELF 468


>gi|330809474|ref|YP_004353936.1| coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377582|gb|AEA68932.1| Coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 462

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/415 (20%), Positives = 163/415 (39%), Gaps = 30/415 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A + +       SL VY+H PFC   C YC  N  + R       ++     E+  
Sbjct: 39  EYQQAAQRSNQAPLPKSLSVYIHIPFCQSLCYYCACNKIITRKTHRAVEYLTYLKREIAL 98

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVE 118
              L    R ++ +  GGGTP+ +  + +A ++D + +++ +      E +IE +P +++
Sbjct: 99  QATLFDRSRKLTQLHLGGGTPTYLTHEQLADLMDCLHQSFDMDDSDAHEFSIEVDPRTID 158

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               QG R+ G NR+S GVQ  + Q    + R  + ++ +  +  AR   F  +S DLIY
Sbjct: 159 AQQIQGLRQLGFNRLSFGVQDFDAQVQIAVNRVQSEAQVVELVEAARLARFKSVSVDLIY 218

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +++ L + ++   D ++ Y        +  +     + + P     ++L  
Sbjct: 219 GLPLQTIASFDVTLSKIIALRPDRIAAYSYAHLPQRVRAQRMIRPEDMPP-PERKLELLE 277

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHS 284
           LT +  +  G     + + +    E        SL   N+  Y      D IG+G  +  
Sbjct: 278 LTINRLTEAGYVYIGMDHFALPDDELVRARAQGSLQR-NFQGYSTHADCDLIGLGVSSIG 336

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V    ++      K    +   + +   AV     LS + +    ++  L     I   
Sbjct: 337 KVGDSYNQNV----KELSQYYARLDQGLLAVQRGYRLSDDDRLRREVISELMCHARIDFG 392

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             E   G              + L R G ++      L    +G  M+ +V    
Sbjct: 393 QIESAHGIRFSEYFADALDRLQELVRDGLLDLRDDE-LVLLPQGQLMMRNVAMAF 446


>gi|268679025|ref|YP_003303456.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268617056|gb|ACZ11421.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 457

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 161/409 (39%), Gaps = 30/409 (7%)

Query: 6   AYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +YE  +  Q S   L +Y H PFC   C +C  N      +  +E +I     E++ + Q
Sbjct: 34  SYEEVLAHQDSSRPLSLYFHLPFCRSACYFCGCNVVYTSKEDKKERYIAYLERELELLSQ 93

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            L   R +  + FGGGTP+    + +  IL  I K++   + + EI+ E +P  +     
Sbjct: 94  HLDTSREVIQMHFGGGTPTFFSTEQLERILKAIKKHFKHFAKDAEISCEIDPRFLSKEQL 153

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
                 G NR+S GVQ   ++  + + R         A+ +A++     ++ DLIY LP 
Sbjct: 154 DVLTSNGFNRVSYGVQDFNDEVQKAIHRIQPYDVTQNAVTMAKSSGIKSINMDLIYGLPY 213

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q+   ++  L+ A+S     L+++        +   M K  +  LP  +V + +   T  
Sbjct: 214 QSFETFQETLRLAVSLDPTRLAVFNYAHVP-WMKKSMRKIDETTLPHPSVKLAIMRYTID 272

Query: 242 ITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKV 288
              ++G     + + +    E         LH  N+  Y      D IGIG  +      
Sbjct: 273 YLESNGYKMIGMDHFAKPDDELFLAIEKGELHR-NFQGYTTKGGADLIGIGLTSIG---- 327

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              R  +   K  +++   +      V     LS +    + ++M +     +++   E 
Sbjct: 328 EGVRHYVQNFKEMDAYENAIDAGKLPVHRGLILSEDDVLRKAVIMEMMSNFKLNIAGIEE 387

Query: 349 LAGRNL------DIECERNLQRQGFIERVQFS-RLRCTQRGMTMLDSVI 390
             G +        IE  +  + +  +   +   ++     G  ++ +++
Sbjct: 388 AFGIDFFDYFADAIEALKPFEAEELVVVDKVGKKILVNPTGTLLIRNIV 436


>gi|22299263|ref|NP_682510.1| coproporphyrinogen III oxidase [Thermosynechococcus elongatus BP-1]
 gi|22295446|dbj|BAC09272.1| oxygen independent coprophorphyrinogen III oxidase 1
           [Thermosynechococcus elongatus BP-1]
          Length = 460

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 152/400 (38%), Gaps = 26/400 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + +    L +YVH PFC   C +C  N  + + +   + ++ +   E+  +  +L   R 
Sbjct: 49  SNEAHLPLSLYVHIPFCQTACYFCGCNVIITQSQTIAKTYLDALAAEIAQVAARLDRTRP 108

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +    +  +   + +++ ++++ EI+IE NP  +  +     R  G 
Sbjct: 109 VIQMHWGGGTPNYLTIDQVESLWRTLTQHFELTNDAEISIEVNPRYINRDYLLRLRNLGF 168

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+Q  + Q    + R    +     +   R   F  ++ DLIY LP QT+  +E 
Sbjct: 169 NRISFGLQDFDPQVQLAVNRVQPETWLFQVMEWIRAAEFESVNIDLIYGLPYQTVQSFEA 228

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            + + L    D ++++           +   D    LP     + +        ++ G  
Sbjct: 229 TIAKTLRLDPDRIAVFNFAYLPNLKPIQKRIDP-TTLPDSATKLTILQRVIERLTSQGYR 287

Query: 250 AYEISNHSFL-----GAESLHNL--NYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
              + + +        A+    L  N+  Y      D IG G  + S ++    +     
Sbjct: 288 YIGMDHFAKPTDELAIAQEAGTLKRNFQGYTTLPTADLIGFGLTSISMLQAAYAQN---- 343

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
           +KH  ++   V     A      L  E      ++M L  +  +           + D  
Sbjct: 344 QKHLATYFSDVAAGQLATERGIQLHCEDLLRRTIIMELMCQFSLDKGAIARQFNLDFDAY 403

Query: 358 ------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                   R L   G +   +  RL  T  G  ++ ++ A
Sbjct: 404 FASELAALRELAADGLLHLGR-DRLEVTPVGRLLIRNITA 442


>gi|238026433|ref|YP_002910664.1| coproporphyrinogen III oxidase [Burkholderia glumae BGR1]
 gi|237875627|gb|ACR27960.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Burkholderia glumae BGR1]
          Length = 463

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 152/399 (38%), Gaps = 28/399 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
           + L +YVH PFC   C YC  N      +     +++    E+    +   P R I+ + 
Sbjct: 55  SELSLYVHIPFCATACFYCGCNRIATGNRAHAVPYLERLKRELALQAERFDPDRVITQLH 114

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +GGGTP+ +     A ++      + +      EI+IE +P +         R  G NR+
Sbjct: 115 WGGGTPTFLSDAQTAELMAATRACFPIAADDEAEISIEIDPRTAVPATLAHLRMQGFNRL 174

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +  R + R        + I  AR +  R +S DLIY LP+Q++  +   L 
Sbjct: 175 SLGVQDVDAEVQRSINRVQPIERTASLIAAARLVGYRSISVDLIYGLPRQSVATFARTLD 234

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  A D +S++        LF    +  +  LP     V L  L   + +  G     
Sbjct: 235 TVIELAPDRISVFGYAHLPQ-LFKMQRRIDEAQLPPPAERVALLGLAIEMLTEAGYVYIG 293

Query: 253 ISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +  G E   +  N     N+  Y      D IG+G  +  +V     + A    K 
Sbjct: 294 MDHFARPGDELVAAQRNGTLQRNFQGYSTRADTDLIGVGVSSIGKVGDVYAQNA----KD 349

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
             +W   +      +     LS + +    ++M L     +   + E   G        R
Sbjct: 350 LAAWGAALDAGRLPIARGVRLSVDDRLRRDVIMRLMCNLTLPFAELEAAYGIRFAERFTR 409

Query: 361 NL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L      +R G +  ++  RL     G   + ++    
Sbjct: 410 ELEALGDFERDGLLT-IEPDRLTIHPVGRLFVRNIAMAF 447


>gi|83652585|gb|ABC36648.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           thailandensis E264]
          Length = 501

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 34/407 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A  +   G  ++ L +Y H PFC   C YC  N    R +     ++     E+  
Sbjct: 80  DYIRAAAD--PGASASDLSLYFHIPFCATACFYCGCNKIATRNRKRARPYLDQLKHEIAL 137

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVE 118
              L  P R+++ + +GGGTP+ +       ++    + +T++S+   E +IE +P +  
Sbjct: 138 QAALFDPERTVTQLHWGGGTPTFLSQAETTELMAATREYFTLASDRTGEFSIEIDPRAAS 197

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R  G NR+SLGVQ  +    R + R          +  AR   +  +  DLIY
Sbjct: 198 PATLVHLRTIGFNRVSLGVQDFDPDVQRAINRVQPLKMTSDLVRAARATGYHSIGIDLIY 257

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT++ +   L   +    D LS++        LF    +     LP     + L  
Sbjct: 258 GLPHQTVSSFARTLDTVVELEPDRLSVFGYAHMPH-LFKMQRQIDAAALPPPATRIALLG 316

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
           L     +  G     + + +    E   +  N     N+  Y      D IGIG  +  +
Sbjct: 317 LAIEQLTRAGYVYIGMDHFARPDDELVRAQRNGTLQRNFQGYSTRADADLIGIGASSIGK 376

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A    K    +   +      +V    LS++ +    ++  L     +    
Sbjct: 377 VGDVYAQNA----KDLPRYGAALADQRLPIVRGVKLSADDRLRRDVITHLMCNLVLPFSH 432

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCT--QRGMT 384
            E   G         +++  R  +R G +        R T    G  
Sbjct: 433 VEAAYGIRFANKFSSELDTLRGFERDGLLSIGAD---RLTIHPAGRL 476


>gi|78777851|ref|YP_394166.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM
           1251]
 gi|78498391|gb|ABB44931.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurimonas denitrificans DSM 1251]
          Length = 350

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 183/351 (52%), Gaps = 29/351 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H PFC  KC YC FNS+V ++ + +EN++ +  T++++  +    R  SI S+F GG
Sbjct: 3   LYIHIPFCDSKCSYCAFNSYVDKFHL-KENYMLALSTQLEFELKRFDVRANSIESVFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +EP++   I + +     +  N+EIT EANP+S      +G  + GVNRIS GVQ
Sbjct: 62  GTPSTVEPKHYKAIFEKLKPY--LMDNIEITSEANPNSATCKWLEGMYELGVNRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +++ L+ L R+H+A++A  AI  A+ I F  +S DLIYA    T    + +L+ A S 
Sbjct: 120 SFDKEKLKILNRSHSAAQAKEAILNAKEIGFKNISLDLIYATLGDTKELLKHDLETAFSL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S Y LTIE+ T F       +  L   +                G   YEISN  
Sbjct: 180 PINHISAYALTIEERTPFESKPYMSNERLSLTSWLFKNI-------KDRGFLQYEISNFG 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HNL YW Y DYIG+G GA  ++++  +     +E++          N   + +
Sbjct: 233 K--YKSTHNLGYWLYKDYIGLGSGAVGKLRLQRYYPTSDVEEYI---------NNPTLTK 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            E LS E +  E + +GLR   G+S+           +++  + L  +G +
Sbjct: 282 IESLSDEDKKIEQIFLGLRSCVGVSIDILNNK-----ELQKAKILVDEGKL 327


>gi|206602105|gb|EDZ38587.1| Oxygen-independent coproporphyrinogen III oxidase [Leptospirillum
           sp. Group II '5-way CG']
          Length = 459

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/409 (21%), Positives = 155/409 (37%), Gaps = 28/409 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A + +     +  L +Y H PFC   C +C  ++ + R K    ++I     E+  
Sbjct: 37  EYQQAIDRS-NRVLAKPLSLYFHIPFCEMLCYFCGCSTIISRDKGKAADYIDVLGAEIAL 95

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEV 119
           + ++    R +  + FGGGTPS + P    ++   I + + V     EI+IE +P     
Sbjct: 96  LGKRFPKSRKVVQLHFGGGTPSSLTPAQNRVLFSHINRWFDVDYQEGEISIEIDPRHASD 155

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +  +  R+ GVNRIS+GVQ  +    + + R              R   F  ++ DLIY 
Sbjct: 156 DYLETVRELGVNRISMGVQDFDPVVQKAVNRIQPVELTEKVYRKVRELGFHSINIDLIYG 215

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  +E  L   +  + D L+++        L   M    +  LP   V  +L  L
Sbjct: 216 LPFQTVKGFEKTLDEIIRMSPDRLAIFNYAHVP-WLKKHMVLIRETDLPRPEVKFELMEL 274

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRV 286
                +  G     + + +    E   +  N     N+  Y      D +GIG  + S V
Sbjct: 275 IGEKLTKAGYVYIGMDHFAKPEDELTRAQANRTLYRNFQGYTTKAQADLVGIGVTSISMV 334

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V    EK+   +   V            LS + Q    ++  +     ++    
Sbjct: 335 GD----VYAQNEKNLPDYQTKVLTGQIPTHRGYRLSKDDQIRRSVITRIMCDLEVNRVHV 390

Query: 347 EMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSV 389
               G   D      LQ      + G +E ++  R+  T  G   + ++
Sbjct: 391 LDPFGEEFDHYFAPELQELEGFAQDGLLE-MKKDRIVLTPLGRIFMRNI 438


>gi|254457750|ref|ZP_05071178.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
 gi|207086542|gb|EDZ63826.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
          Length = 351

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 168/344 (48%), Gaps = 24/344 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGG 78
           +Y+H PFC  KC YC FNS+V ++ + +E ++ + L ++  +  R     +SI S+F GG
Sbjct: 3   LYIHIPFCDSKCSYCAFNSYVDKFHL-KEQYMDALLAQLDFELKRFDASSKSIESVFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS + PQ    I + I     + +++EIT EANP+S      QG    GVNRIS GVQ
Sbjct: 62  GTPSTVSPQLYKPIFELIKPY--LQNHIEITSEANPNSATKTWLQGMFDLGVNRISFGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+ L R HN  +A  AI  A NI    +S DLIYA    T    + +L+ A S 
Sbjct: 120 SFNDKKLKLLNRAHNVQDAKKAILNAHNIGYKNLSLDLIYATLGDTKELLQNDLKTAFSL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++HLS Y LTIE+GT F          L       +L N         G   YEISN  
Sbjct: 180 PINHLSAYALTIEEGTPFESKPYMSKETL-------ELTNWIFETIITSGFKQYEISNFG 232

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HN  YW Y DYIG+G GA  ++ +        +E + ++            ++
Sbjct: 233 --TYKSTHNTGYWEYKDYIGLGSGAVGKLGLQRFYPTSVVEDYIKNPFD---------IK 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
            E L+ E +  E + +GLR   G+          +  DI  + N
Sbjct: 282 VEDLTIEDKKIEQIFLGLRSFIGVETSILNSKEQKRADILVDEN 325


>gi|90022128|ref|YP_527955.1| coproporphyrinogen III oxidase [Saccharophagus degradans 2-40]
 gi|89951728|gb|ABD81743.1| oxygen-independent coproporphyrinogen III oxidase [Saccharophagus
           degradans 2-40]
          Length = 484

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 72/403 (17%), Positives = 151/403 (37%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSI 71
            +    L +Y H PFC   C YC  N  +   K     ++ + + EM  +  Q+   R +
Sbjct: 61  NKAQKPLSLYFHIPFCDTVCYYCGCNKIITANKAKSTPYLTAIIKEMDLVAAQVDTTRPV 120

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAG 129
             + FGGGTP+ +  + +  +++ +   + V+ +   + +IE +P+ V     +  R  G
Sbjct: 121 QQLHFGGGTPTFLSDEQLTTLMNAVKARFNVADSAFRDFSIEVHPAGVTPQRIKHLRTIG 180

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+S+G+Q       + + R ++  +    +   R   F  +S DLIY LPKQT   + 
Sbjct: 181 FNRVSMGIQDFSPDVQKAVNRFNSPQQVGELVTAVRENNFASLSMDLIYGLPKQTAESFA 240

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             LQ+ ++ + D ++L+        LF    +     LP     + +   +       G 
Sbjct: 241 ETLQKIIALSPDRIALFNYAHLPH-LFKTQKQINARELPEPQEKLIILQQSIQSLCNAGY 299

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               + + + +         E   + N+  Y      D +  G  + S +     +    
Sbjct: 300 QFIGMDHFAKVDDSLAVAQREGELHRNFQGYSTHGDCDLLAFGVSSISSIGNTYSQN--- 356

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K+   +   +  N   +++   L+ +      ++  +     +  +      G ++  
Sbjct: 357 -SKNLTEYYAAINTNQLPIIKGLTLTDDDLLRREVISQIICNFELDYQKINRQFGIDVAQ 415

Query: 357 ECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                L      +  G IE  Q  +L     G  ++  +    
Sbjct: 416 YFADALTELKVFEEDGLIEFTQA-KLNVKPCGRLLVRRICMAF 457


>gi|213024817|ref|ZP_03339264.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 323

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 18/327 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
             +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    L   
Sbjct: 2   QAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAPLFAD 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++     R  
Sbjct: 62  RHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDHLRAE 121

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT   +
Sbjct: 122 GFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQTPESF 181

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+R      D LS++       TLF    K  D  LPS    +D+   T    +  G
Sbjct: 182 AFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSLTQAG 240

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E + + N+  Y      D +G+G  A S +  G     +
Sbjct: 241 YQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDG----YM 296

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLS 322
             +K  + + + V + G+A+     L+
Sbjct: 297 QNQKELKRYYQQVDERGNALWRGITLT 323


>gi|257093716|ref|YP_003167357.1| coproporphyrinogen III oxidase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046240|gb|ACV35428.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 465

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 160/400 (40%), Gaps = 31/400 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRS 70
           G  S  L +Y H PFC   C YC  N  + +       +++    E+         G + 
Sbjct: 53  GAISRQLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLRYLAKELTLQSSYLEGGDQE 112

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++ + +GGGTP+ +    +  ++    K++ +    E +IE +P  V+    +   + G 
Sbjct: 113 VAQLHWGGGTPTFLSHDEMRQLMAATRKHFRLIEGGEYSIEVDPRKVDRATVELLAELGF 172

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ  +    + + R  + +E  A I  AR   F  +S DLIY LPKQ++  +  
Sbjct: 173 NRMSVGVQDFDAGVQQAVNRVQSEAETCAVIDAARAAGFRSISVDLIYGLPKQSLEGFTR 232

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+R ++ + D +S+Y       +LF    +  +  +PS +  + + +L     +  G  
Sbjct: 233 TLERVIAVSPDRVSIYNYAHLP-SLFKPQRRILEADMPSADARLQILSLAIRKMTEAGYI 291

Query: 250 AYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              + + +           +   + N+  Y      D +  G  + S+V     +     
Sbjct: 292 YIGMDHFAKPDDELATAQRQGRLHRNFQGYSTHSDCDLLAFGISSISKVGPTYSQNV--- 348

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK--------DWEML 349
            K  + +  ++      V     L+++      ++  L     +S++        D+   
Sbjct: 349 -KTLDEYYDLLDSGTLPVYRGIELNADDLLRRSIIQSLMCHFELSIESIEIAHLIDFRKY 407

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               LD    R +   G + RV    +    RG  ++ ++
Sbjct: 408 FATELDD--LREMVDAGLV-RVDDKWITVMPRGRILVRAI 444


>gi|75910032|ref|YP_324328.1| coproporphyrinogen III oxidase [Anabaena variabilis ATCC 29413]
 gi|75703757|gb|ABA23433.1| coproporphyrinogen III oxidase, anaerobic [Anabaena variabilis ATCC
           29413]
          Length = 460

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/408 (18%), Positives = 164/408 (40%), Gaps = 28/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y SA   +   +  + + +Y H PFC   C +C  N+ +   K   + +++  + E++ 
Sbjct: 42  DYQSAIAASNHRK--SPISLYFHIPFCQSSCYFCGCNTVISNNKNIAKPYLEHLVKEIKH 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              L  P R +  + +GGGTP+ ++   +  +   I +++ +    EI+IE NP  V+ N
Sbjct: 100 TSNLIDPDRKVLQVHWGGGTPNYLDCDQVEFLWKHIHRHFNIDPQAEISIEINPRYVDQN 159

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NRIS G+Q    Q  + + R       +  +   +   F  ++ DLIY L
Sbjct: 160 YISFLREIGFNRISFGIQDFNSQVQKAVNRIQPEELLVNVMSWIKAAKFDSVNVDLIYGL 219

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  +   +++ ++   D + ++           + +   +  LP     +++  +T
Sbjct: 220 PHQTLQTFRETVKKTVALDPDRIVVFNFAYVPWLKPAQKNIPLEA-LPQPQEKLEILKMT 278

Query: 240 QSITSAHGLHAYEISNHSF-----LGAESLHNL--NYWRY-----GDYIGIGPGAHSRVK 287
               +        + + +        A+  H L  N+  Y      +  G G  + S + 
Sbjct: 279 IEELTNSQYLFIGMDHFAKHNDELAIAQRNHTLQRNFQGYTTHAGTELFGFGATSISML- 337

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              H   +   K  + + + V  +   V +   L+++      ++M +     +  ++ E
Sbjct: 338 ---HDAYVQNHKQLKEYYQAVAGDALPVSKGIKLTTDDILRRDVIMCIMSNFYLHKQEIE 394

Query: 348 MLAGRNLD------IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                N D      I   + L   G +  +    ++ T+ G  ++ ++
Sbjct: 395 EKYQINFDEYFSQEIAALKPLAADGLVS-LSSKHIQVTEIGRLLVRNI 441


>gi|296273265|ref|YP_003655896.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097439|gb|ADG93389.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
          Length = 353

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 107/356 (30%), Positives = 174/356 (48%), Gaps = 27/356 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGG 79
           +Y+H PFC  KC YC FNS+V R+ + Q  ++++   ++ + +        I ++F GGG
Sbjct: 3   LYIHIPFCDSKCFYCAFNSYVDRFHLKQ-TYMKAIEKQLIYDIEHYLKDEKIETVFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++ +    I   I+    +  N EIT EANP+S      QG R  GVNRIS GVQS
Sbjct: 62  TPSCVDFKEYENIFRIISPY--LIENCEITSEANPNSATKEWLQGMRDLGVNRISFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             ++ L++L R HN++ AI+AI  A+ I F  ++ D+IY +      + + +        
Sbjct: 120 FNDKKLKYLNRAHNSNSAISAIQNAKCIGFNSINCDIIYGVQGDNFEKLKYDFNMINDQN 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +DH+S Y LT+E+GT F+             +     Y L        G   YEISN S 
Sbjct: 180 IDHISAYSLTLEEGTKFFNK------SHVKIDDEELSYKLF-DYLKGLGYEQYEISNFSK 232

Query: 259 LGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +S HN  YW Y +Y+GIG GA   V    +    +IE++ E+ +           E
Sbjct: 233 SKKTQSKHNFGYWEYTNYLGIGTGAVGFVDNFRYYPNKNIEQYIENPISY---------E 283

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
           KE++       E +++GLR   G+++  +        +++  + L  +  + +V  
Sbjct: 284 KEYMDEVDIKTEKVLLGLRSNVGVNLAIFNEN-----ELKKAKILIEEKKLYKVDN 334


>gi|261855485|ref|YP_003262768.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
 gi|261835954|gb|ACX95721.1| oxygen-independent coproporphyrinogen III oxidase [Halothiobacillus
           neapolitanus c2]
          Length = 461

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 79/399 (19%), Positives = 148/399 (37%), Gaps = 30/399 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFF 76
            L +Y H PFC   C YC  N  V + +   + ++   + E+    +L G  R++  + +
Sbjct: 54  PLSIYTHIPFCDTVCYYCACNKVVTKDRARAQPYVDDVVLELALQGKLFGQGRAVDQLHW 113

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ +    +  I++   +++ +      E +IE +P   +       R  G NRIS
Sbjct: 114 GGGTPTFLSDAQMRQIMEATGRHFELKTDDTGEYSIEIDPREADAGTIAVLRDLGFNRIS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +E+    + R  + +E    +  AR   F  +S DLIY LP Q+   +   L  
Sbjct: 174 LGVQDFDERVQEAVNRIQSYAETKEVVDAARAEGFHGVSLDLIYGLPHQSRDSFLRTLDT 233

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +  A D LS++       T F    +     LP+    + +   +       G     +
Sbjct: 234 VIEMAPDRLSIFNYAHLP-TRFKPQRRINTEDLPNAAEKLRILGGSIERLQEAGYVLIGM 292

Query: 254 SNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +             +LH  N+  Y      D + +G  + S+V     +      K 
Sbjct: 293 DHFAKPDDPLAIAQRNGTLHR-NFQGYSTHAECDMVAVGVSSISQVGGAFSQNT----KD 347

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
             ++ + V      +     L+ E     F++  +     +     E   G +      +
Sbjct: 348 LVAYHEAVSAGRLPIERGYVLTDEDHLRRFVISEIISHFRLDFAQVEQKFGISFASHFAK 407

Query: 361 NL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L           + R+    L    RG  ++ ++    
Sbjct: 408 ALSELQPMVADELL-RLDNDHLEVLPRGRLLIRNICMAF 445


>gi|302335761|ref|YP_003800968.1| Coproporphyrinogen dehydrogenase [Olsenella uli DSM 7084]
 gi|301319601|gb|ADK68088.1| Coproporphyrinogen dehydrogenase [Olsenella uli DSM 7084]
          Length = 427

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 105/396 (26%), Positives = 165/396 (41%), Gaps = 28/396 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            +YVH PFC  KCPYCDF S    R       ++   L +   +R +       + + GG
Sbjct: 25  ALYVHIPFCAHKCPYCDFASRATARNDARMLPYLGKILEQYSELRSVGLLEGCDTAYVGG 84

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP ++       ++D       + +  E ++EANP S+  +      +  + R+SLGVQ
Sbjct: 85  GTPPMLGGG----LVDLSLAIGELGTLSEFSMEANPESLPADLVGELAQTPLTRVSLGVQ 140

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L  LGR H A +A+AA+    +    +S DL+ A+P Q+   W   L   LS  
Sbjct: 141 STDDVELAALGRTHGARDALAAVESVASSGLAVSCDLMCAIPHQSDATWRRSLADVLSAG 200

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             H+S+Y L+IE+ T F   +         E V      +     +A GL  YE+++++ 
Sbjct: 201 ATHVSVYPLSIEEKTPFGARYAGTRPDFNDEAVQARRMEIACDALAAAGLRRYEVASYAR 260

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH------------------RVAISIEKH 300
            G E  HN  YW    Y+GIG  A   +    +                  RV + ++  
Sbjct: 261 PGRECRHNQTYWEGRSYLGIGVAAAGMLDRTGYESLRRACPQLPVPLPGIARVRLVVKDD 320

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            +++L             E L+  Q   E LM+G RL  GI         G       + 
Sbjct: 321 LDAFLAS-SSCADLHFSGEMLTERQAVAEDLMLGARLARGIGEDLLSRARGVVGADALDA 379

Query: 361 NL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L    R G   R +   L  T+RG  + + +   L
Sbjct: 380 ALGRVHRSGLATR-EGGSLVPTRRGWLLGNELYGEL 414


>gi|182412425|ref|YP_001817491.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
 gi|177839639|gb|ACB73891.1| oxygen-independent coproporphyrinogen III oxidase [Opitutus terrae
           PB90-1]
          Length = 471

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/410 (20%), Positives = 149/410 (36%), Gaps = 28/410 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MR 63
            A   + T      L +Y H PFC  +C +C   + V R +     ++     EM+    
Sbjct: 52  EAIAEDNTPDA-GPLSLYFHLPFCETRCWFCGCTTVVTRRRESAAEYLDWLGQEMRLTAA 110

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++   R ++ I  GGGTP+   P  +  +   I + +TVS +VE ++E +P  +  ++  
Sbjct: 111 RMNRARPVTQIHLGGGTPTFFPPDELRRLGTMIRELFTVSPDVEFSVEVDPRRLTFDHVA 170

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R+ G  R SLGVQ    +    + R    ++   A+   R   F  ++ DLI+ LP Q
Sbjct: 171 ALREIGARRASLGVQDTNPEVQLAIHRVQPQAQNQRAVEWLREAGFNSINVDLIHGLPLQ 230

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T T +   +   L+   + L ++           +   D    LPS    + ++ L  + 
Sbjct: 231 TATSFGHTIDDVLTLQPERLVVFSYAHVPWIKPAQRIFDDRGQLPSAEEKLGMFALAHAR 290

Query: 243 TSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
            +A G     + + +    E        +LH  N+  Y           G  + S     
Sbjct: 291 LTAAGYVDIGLDHFARPDDELAIAQRSGTLHR-NFQGYSTHAGASLYAFGMSSISSTPTT 349

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +      K   +W   +      +     LS E +    ++M +     +       +
Sbjct: 350 YRQNH----KTLPAWRDAIVAGQLPIERGLRLSLEDRRRRTIIMKIMCDRRLDYAALSQV 405

Query: 350 AGRNLDIECER------NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G N             +L+  G IER     L     G+ +L  +    
Sbjct: 406 FGFNFSERYAAILGSMSDLEADGLIERT-GQALTVKPVGVPLLRVIAMRF 454


>gi|17230618|ref|NP_487166.1| coproporphyrinogen III oxidase [Nostoc sp. PCC 7120]
 gi|17132221|dbj|BAB74825.1| oxygen independent coprophorphyrinogen III oxidase [Nostoc sp. PCC
           7120]
          Length = 460

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 74/408 (18%), Positives = 164/408 (40%), Gaps = 28/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y SA   +   +  + + +Y H PFC   C +C  N+ +   K   + +++  + E++ 
Sbjct: 42  DYQSAIAASNHRK--SPISLYFHIPFCQSSCYFCGCNTVISNNKNIAKPYLEHLVREIKH 99

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              L  P R +  + +GGGTP+ ++   +  +   I +++ +    EI++E NP  V+ N
Sbjct: 100 TSNLIDPDRKVLQVHWGGGTPNYLDCDQVEFLWKHIHRHFNIDPQAEISVEINPRYVDQN 159

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NRIS G+Q    Q  + + R       +  +   +   F  ++ DLIY L
Sbjct: 160 YISFLREIGFNRISFGIQDFNSQVQKAVNRIQPEELLVNVMSWIKAAKFDSVNVDLIYGL 219

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  +   +++ ++   D + ++           + +   +  LP     +++  +T
Sbjct: 220 PHQTLQTFRETVKKTVALDPDRIVVFNFAYVPWLKPAQKNIPLEA-LPQPQEKLEILKMT 278

Query: 240 QSITSAHGLHAYEISNHSF-----LGAESLHNL--NYWRY-----GDYIGIGPGAHSRVK 287
               +        + + +        A+  H L  N+  Y      +  G G  + S + 
Sbjct: 279 IEELTNSQYLFIGMDHFAKHNDELAIAQRNHTLQRNFQGYTTHAGTELFGFGATSISML- 337

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              H   +   K  + + + V  +   V +   L+++      ++M +     +  ++ E
Sbjct: 338 ---HDAYVQNHKQLKEYYQAVAGDALPVSKGIKLTTDDILRRDVIMCIMSNFYLHKQEIE 394

Query: 348 MLAGRNLD------IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                N D      I   + L   G +  +    ++ T+ G  ++ ++
Sbjct: 395 DKYHINFDEYFSQEIAALKPLAADGLVS-LSSKHIQVTEIGRLLVRNI 441


>gi|67923603|ref|ZP_00517075.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Crocosphaera watsonii WH 8501]
 gi|67854573|gb|EAM49860.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Crocosphaera watsonii WH 8501]
          Length = 465

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 159/404 (39%), Gaps = 32/404 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSI 71
                 L +Y H PFC   C +C  N+ +   K     +++  +++++   +L    RS+
Sbjct: 51  NHNKTPLSLYCHIPFCETACYFCGCNTIITGNKKIAPPYLEYLISDIERTAELISDKRSV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + I +GGGTP+ +    I  + + + KN+ +  N EI+IE NP  ++ N     R  G N
Sbjct: 111 NQIHWGGGTPNYLNQSQIDQLFNTLVKNFNIDKNAEISIEVNPRYLDRNLVFFLRNLGFN 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+Q  + +  + + R          +   R   F  ++ DLIY LP Q    ++  
Sbjct: 171 RISFGIQDFDPKVQKAINRIQPEEMLFNVMGWMREAEFESVNVDLIYGLPYQNRHTFKKT 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ +    + ++++        +     K     LP+ +  + +  +T    + +    
Sbjct: 231 VEKTIELDPNRIAVFNFAYIP-WIKAAQKKMPVNELPNASEKLAILQMTIEEFNNNDYLF 289

Query: 251 YEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D +  G  + S +    H V +  
Sbjct: 290 IGMDHFAKPNDELAIAQAAGDLHR-NFQGYTTKPESDLLAFGMTSISML----HDVYVQN 344

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  + + K +      + +   LS +      ++M L  +  +     E     + D++
Sbjct: 345 HKRIKHYYKSLDAGHLPIEKGVTLSKDDIIRRSVIMELMCQSQLYKDRIEEKYNLHFDLD 404

Query: 358 C----------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                       R L+  G I  +   RL  T  G  ++ ++ A
Sbjct: 405 FDQYFAQELIDLRPLEADGLIH-LHSDRLEVTNTGRWLIRNIAA 447


>gi|78484846|ref|YP_390771.1| coproporphyrinogen III oxidase [Thiomicrospira crunogena XCL-2]
 gi|78363132|gb|ABB41097.1| coproporphyrinogen III oxidase, anaerobic [Thiomicrospira crunogena
           XCL-2]
          Length = 460

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/414 (19%), Positives = 157/414 (37%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y +A E +       +L +Y H PFC   C +C  N    R +     ++     E++ 
Sbjct: 39  DYQAAAERS--NASDRNLSLYFHIPFCDTVCFFCACNKVWTRDRSKTTPYLARLYQEVEM 96

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
             +L    R +  + +GGGTP+ I    +  ++    K++ +  +   E +IE +P    
Sbjct: 97  QAKLFDSNRKVDQLHWGGGTPTFINMDEMRELMAVTRKHFNLHDDDSGEYSIEIDPREAN 156

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
             + +  R+ G NR+SLGVQ  +    + + R    ++    +  AR   F  ++ DLIY
Sbjct: 157 KESVKLLRELGFNRMSLGVQDFDPNVQKAVNRIQTEAQTFEVLEGAREAGFMSVNVDLIY 216

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT + +   L + L  A D  S++       ++F    K  +  +PS +  + + +
Sbjct: 217 GLPHQTESGFMATLDKVLEVAPDRFSIFNYAHMP-SMFPTQKKMNEADMPSPDEKLAILH 275

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSR 285
            T +     G     + + +    E   +  N     N+  Y      D IG+G  + S 
Sbjct: 276 ATTNRLLEAGYVYIGMDHFAKPDDELAVAQRNETLYRNFQGYSTHAECDLIGMGATSISL 335

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     +      K    + + +     AV     L+ + +    ++  L     ++   
Sbjct: 336 INNTYAQNH----KSLNDYYQAIDAGHLAVFRGVELTEDDELRRDVITRLISHFHLNFAS 391

Query: 346 WEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E   G       E+       +   G IE      L  T  G  ++ ++    
Sbjct: 392 VEAQWGIVFKEYFEQEMNALVPMIEDGLIELSDSD-LYVTAAGRLLIRNICMAF 444


>gi|309789572|ref|ZP_07684153.1| oxygen-independent coproporphyrinogen III oxidase [Oscillochloris
           trichoides DG6]
 gi|308228308|gb|EFO81955.1| oxygen-independent coproporphyrinogen III oxidase [Oscillochloris
           trichoides DG6]
          Length = 459

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 80/404 (19%), Positives = 153/404 (37%), Gaps = 27/404 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y  A  N++  +  + + +YVH PFC ++C YC  N+ V       + ++     E+  
Sbjct: 38  EYREAL-NDLATRTEDPISLYVHLPFCAERCTYCGCNATVTTRTDVVDKYLDHLEQELAL 96

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  Q+   R +  + +GGGTP+ +    +  ++  + K++ + S+ E+ IE +P    V 
Sbjct: 97  VVPQMGAQRRVVQMHWGGGTPNFLNQPQMERLVGLLNKHFAIDSDGEVAIEFDPRIGSVE 156

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
             +  R+ G NRIS GVQ +       +GR     +       +R   F  ++ D++Y L
Sbjct: 157 QLEQIRELGFNRISFGVQDINPVVQEAIGRIQPFEQTEKLFRASRELGFSSVNVDMVYGL 216

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PKQT   +   L        D ++ +        +           LP       L+ + 
Sbjct: 217 PKQTDESFRDTLLAIRDLRPDRIACFSYAHVP-WVKPNQKLIDVTALPDTFTKFSLFRMA 275

Query: 240 QSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVK 287
             +    G     + +        +    E   + N+  Y      + I  G  + S + 
Sbjct: 276 IDMMGEVGYDWVGMDHFAQRDDELAIAARERRLHRNFMGYTTRPASNMIAFGMSSISDLV 335

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +     E H   + KMV      +V+   L+ +      +++ L     +      
Sbjct: 336 GRFAQN----EPHLGKYQKMVAAGKLPIVKGYKLTEDDLMRRQVILHLMCNLELPYDLTR 391

Query: 348 MLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTM 385
              G +L      +L+R       GFIE +   R++ T  G   
Sbjct: 392 TNYGMSLQDALGEDLERMEAYVEDGFIELL-PDRIQVTPLGRFF 434


>gi|194333441|ref|YP_002015301.1| coproporphyrinogen III oxidase [Prosthecochloris aestuarii DSM 271]
 gi|194311259|gb|ACF45654.1| oxygen-independent coproporphyrinogen III oxidase [Prosthecochloris
           aestuarii DSM 271]
          Length = 475

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 163/395 (41%), Gaps = 23/395 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS 73
            +  + +Y+H P+C   C +C  N+H  +    +E ++Q+ L E Q       G  ++  
Sbjct: 48  DTTGVSMYIHIPYCENYCYFCGCNAHRTQDHSYEEPYLQALLKEWQMYLDVFPGTLNVKE 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+   P+N+  +++G+ ++         + E NP S    + +     G  R+
Sbjct: 108 MHIGGGTPTFFSPENLIRLVNGLYEHVNRVDGYMFSFETNPRSTTKEHLEALYSVGFRRM 167

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      + 
Sbjct: 168 SFGIQDFDPVVQKEINRMQSFELVKEKVDLAREIGFTSINFDLVYGLPKQTLATITDTIA 227

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +    D L+ Y        ++    K  +  LP   V  +LY+    +  + G H   
Sbjct: 228 KVMELRPDRLAFYAYG-HNPHMYEGQRKFKEEDLPVGAVKQELYDKGLEMLESIGYHEIG 286

Query: 253 ISNHSFLG---AE-----SLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +  G    E     SLH  N+  Y +      + +G  + S       +   S +K
Sbjct: 287 MDHFALEGDTLYEAAKTGSLHR-NFMGYTENTTQMMLALGSSSISDTWYAFAQNERSDKK 345

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIEC 358
               ++++V +    ++    L+ E       ++ L  R+  S  D +      ++    
Sbjct: 346 ----YIEVVNQGRFPLLRGHLLTDEDLVLRRHILNLMCRQETSWADPKDYTDELDVAKFR 401

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             ++Q  G +   +   +R T+ G+  L ++    
Sbjct: 402 LEDMQNDGMVVLSENG-VRVTEIGIPFLRNICMAF 435


>gi|145220174|ref|YP_001130883.1| coproporphyrinogen III oxidase [Prosthecochloris vibrioformis DSM
           265]
 gi|145206338|gb|ABP37381.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 472

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 161/394 (40%), Gaps = 23/394 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           ++ + +Y+H P+C   C +C  N+H  +    ++ ++++ L E Q       G  ++  +
Sbjct: 49  TSGISMYIHIPYCENHCYFCGCNAHRTQDHSFEKPYLEALLKEWQMYLDVFPGTLNVKEM 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+ L+++G+  +         + E NP S    +      AG  R+S
Sbjct: 109 HIGGGTPTFFSPENLTLLIEGLYSHVNRMEGYVFSFETNPRSTTKEHLVALYNAGFRRLS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      + +
Sbjct: 169 FGIQDFDPIVQKEINRIQSFELVKEKVDLAREIGFTSVNFDLVYGLPKQTLATITDTIDK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    +  +  LP  +   +LY+   ++  + G H   +
Sbjct: 229 VMQLRPDRLAFYAYG-HNPHMYEGQRRFKEEDLPVGDAKQELYDKGSAMLESIGYHEIGM 287

Query: 254 SNHSFLG--------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G          SLH  N+  Y +      + +G  + S     +       E+ 
Sbjct: 288 DHFAIEGDSLYTAAKNSSLHR-NFMGYTENTTQMMLALGSSSIS----DTWYAFAQNERT 342

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECE 359
             +++K V +    +     L+ E       ++ L  R+  S  D ++     ++     
Sbjct: 343 DGAYIKAVNEGRFPLHRGHLLTDEDLVLRRHILNLMCRQETSWADPKLYTEELDVARYRL 402

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +++  G +       +R T  G+  L ++    
Sbjct: 403 EDMENDGLVVLGDK-CVRVTDEGIPYLRNICMAF 435


>gi|255020106|ref|ZP_05292177.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970468|gb|EET27959.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Acidithiobacillus caldus ATCC 51756]
          Length = 461

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/412 (23%), Positives = 165/412 (40%), Gaps = 32/412 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+   E +        L +Y+H PFC   C YC     V R++   E ++Q    EM+ 
Sbjct: 41  DYIEQLERS--NDHGRPLSLYLHIPFCEHLCFYCACTKVVTRHREWGEPYVQRLEAEMRL 98

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVE 118
           + R + G R +  + FGGGTP+ +   ++  +LD I +++ +      E  +E +P ++E
Sbjct: 99  LRRHVDGERPVVQLHFGGGTPTFLRAADMDRLLDAIDRHFRLLPEDRGEYGVEVDPRALE 158

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIY 177
                  R  G NR+S+GVQ L+ +  R + R  +     A +  AR +  R +S DLIY
Sbjct: 159 PGMLARLRAFGCNRLSMGVQDLDPEVQRAVHREQSLDLVAAVLAEARALGYRSISLDLIY 218

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+Q  + +   L   ++   D +SL+         F    +  +  LPS  + +D+ +
Sbjct: 219 GLPRQNRSSFANTLDAIVALRPDRISLFNYAHLPE-RFAPQRRIAEAELPSPALKLDILS 277

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHS 284
            + +   A G     + + +    E        +L+  N+  Y      D + +G  A S
Sbjct: 278 DSIARLQAAGYVYIGMDHFALPEDELTLAQRAGTLYR-NFQGYSTHAEADLLALGMSAIS 336

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                +        K  E+W   +  +   V     LS E +   F++  L     +S  
Sbjct: 337 ----ATATAYSQNHKDLETWNAAIDAHKLPVERGWVLSPEDRLRRFVITRLICDFRLSRS 392

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E   G +              L   G +     S L  T RG  ++  V 
Sbjct: 393 AVEERFGVDFPRHFAAEWPQLMALADDGLLT-WDGSTLTITARGRLLVRHVC 443


>gi|217978694|ref|YP_002362841.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
 gi|217504070|gb|ACK51479.1| oxygen-independent coproporphyrinogen III oxidase [Methylocella
           silvestris BL2]
          Length = 451

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 84/407 (20%), Positives = 153/407 (37%), Gaps = 29/407 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L+A            +  Y+H PFC   C YC  ++   R       ++ + L E+   
Sbjct: 42  WLAAL------APGEPVSAYLHIPFCTDLCWYCGCSTKATRRYEPVAAYVDTLLAEIDAA 95

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L G   +  + +GGG+P ++ P +I  +   + + + +    E  +E +P  +    
Sbjct: 96  AAALPGKMRLDHLHWGGGSPDILSPADIERLTGALNRCFAIEPGAEFAVEIDPRLMSGQK 155

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
              + +AGV R+SLGVQ  +E     +GR  + +    A+ L R      ++ DL+Y LP
Sbjct: 156 ASAFVRAGVTRVSLGVQDFDEDVQEAIGRIQSFAATKEAVDLFRARGVGSVNIDLVYGLP 215

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +Q++      + + LS + D ++L+                 +  LP             
Sbjct: 216 RQSVASLSRTVDQVLSLSPDRIALFGYAHLPH-RMRNQRLIDEAALPPPLERFAQARAAA 274

Query: 241 SITSAHGLHAYEISNHSFLG---AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHR 292
                 G  A  I + +      A    N N+  Y        IG G  A  R+  G  +
Sbjct: 275 DGLRRAGYVALGIDHFAKPSDSLAAGKLNRNFQGYTADGCETLIGFGASAIGRLPQGFAQ 334

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
            A ++      +  +V   G A V    L+ + +   +++  L     +   D E   G 
Sbjct: 335 NAPTV----GVYAALVEAQGLATVRGFALTPDDRLRAYVIERLMCDFSLEAGDLERRFGA 390

Query: 353 NLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +    R  +       +GF+ER      R T+RG   +  + A  
Sbjct: 391 AAEP-ILREAEAIVRDDAEGFVERAPDG-FRLTERGKPFVRHICARF 435


>gi|124026436|ref|YP_001015551.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. NATL1A]
 gi|123961504|gb|ABM76287.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. NATL1A]
          Length = 410

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 118/408 (28%), Positives = 190/408 (46%), Gaps = 39/408 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE----------NFIQSFLTEMQWMRQL 65
           +     Y+H PFC K+C YCDF S +      Q            ++     E+      
Sbjct: 3   APPRSAYLHIPFCHKRCFYCDF-SIIPLGDSAQAPDSPGITSINAYLDLLHREISI---S 58

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
               ++S+I+ GGGTPSL++   +  +L  + + +      EIT+E +P++   N+  GY
Sbjct: 59  PKGPALSTIYLGGGTPSLLKKNEVGDLLQNLQRKFGFQDGAEITMEVDPATFFENDLHGY 118

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-----RMSFDLIYALP 180
              G+NR SLG Q+ ++ +L  +GR HN S+ I A     N+F        S DLI  LP
Sbjct: 119 IGIGINRFSLGAQAFDDSTLASIGRKHNRSQLIEACDWVNNLFKKGMLRSWSLDLIQNLP 178

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +++W  EL++A+     HLS+Y LTIE  T+F ++HK G L +P ++ +  +   T 
Sbjct: 179 GLNLSKWIKELEQAVRTEAPHLSIYDLTIEPDTVFGRLHKKGKLNIPIDSESQKIDFETT 238

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            +  + G   YEIS++S  G  S HN  YW    + G G G+ S           S  + 
Sbjct: 239 RLLKSRGFARYEISSYSLPGHASRHNRMYWSGSGWWGFGMGSTS----APWGERFSRPRT 294

Query: 301 PESWLKMVRKNGHAVVEKEFLSSE----QQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
              + K + +     +EK  LS E       DE LM+GLR REGI +++    AG     
Sbjct: 295 IAGYKKWLEQQESQSLEK-TLSIEKSKSMPLDELLMIGLRRREGIHLEELAKNAGWT-QK 352

Query: 357 ECERNL----------QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +C++NL            +GF+ R          +G  + + ++  + 
Sbjct: 353 KCDKNLKSLEKFWLNSINEGFLLRHNGRYFLSDPKGFQISNQILIQMF 400


>gi|254447771|ref|ZP_05061236.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
 gi|198262551|gb|EDY86831.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HTCC5015]
          Length = 465

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 154/409 (37%), Gaps = 28/409 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A   +        L +Y+H PFC   C YC  N  V         +++    E+   
Sbjct: 38  YQEALRASNEELVPKPLSLYLHIPFCHSLCYYCGCNKIVTPDLDKGRAYLEELYQEIALR 97

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEV 119
            Q     R +  I FGGGTP+ + P  +  +LD +A+N+       +E+ IE +P  V  
Sbjct: 98  SQGFARDRLVRQIHFGGGTPNFLRPHQLREVLDTLARNFHFDLPQEMELGIEIDPRWVSP 157

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + +     G NR+S G+Q  +    R + R  +  +    I +AR    P +S DLIY 
Sbjct: 158 EDIRELAGYGFNRMSFGIQDFDADVQRAVNRLQSFEDVRQLIEMARACHVPSVSVDLIYG 217

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP+Q++  ++  L + +  A D +SLY                 D  L   +  + L+ +
Sbjct: 218 LPRQSLDSFKKTLNQVIELAPDRVSLYSYAHMPD-KIKSQRFIRDEDLLKGSDKLGLFLM 276

Query: 239 TQSITSAHGLHAYEISNHSFL----------GAESLHNLNYWRYG--DYIGIGPGAHSRV 286
                   G     + + +            G+   +   Y  +G  D +G+G  A SR+
Sbjct: 277 ALKHFGDAGYEYIGMDHFARPDDPLVAAKEEGSLQRNFQGYSTHGGCDIVGMGVSAISRI 336

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +     E +  ++   + +    +     L+ + +  E  +  +  R  + +   
Sbjct: 337 GDAYSQN----ESNLSAYQNAISQGALPIERGVALNRDDRIREQAIQSIMCRGELDLLSL 392

Query: 347 EMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 +      +       L+ +G +   +   L  T+ G   L ++
Sbjct: 393 GRHFDMDAKAYFAKEWQQLLSLEHEGLLTLSEEG-LMATETGSLFLRNI 440


>gi|163748908|ref|ZP_02156160.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161331682|gb|EDQ02487.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 458

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 164/403 (40%), Gaps = 29/403 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H PFC K C YC  N  + R++   + +++   TE+     L   
Sbjct: 44  TSIKNSKSDKLSLYIHIPFCAKLCYYCGCNKVITRHQHKADQYLEYLATEIVKRSPLFKD 103

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ +    I  + + I  N+ V+   E +IE +P  +E+      ++A
Sbjct: 104 YLVTQIHWGGGTPTFLRSDQILKLSELIKANFNVAEVGEYSIEVDPREIELTMLDTLKEA 163

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 164 GFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMAKAKELGFVSTNIDLIYGLPHQTPKTF 223

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L    D LS++       + F    K  D  L S    +++ + T    +  G
Sbjct: 224 AETMQRVLDLDPDRLSVFNYAHLP-SRFAAQRKIKDEDLASPQQKLEMLHQTIETLTDAG 282

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 283 YQYIGMDHFAKPDDELSILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 340

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK--------DWE 347
             +K    + + +  NGHA+ +   L+ + +    ++  L     + +          +E
Sbjct: 341 --QKDIRPYFESIDANGHALWKGCGLNRDDEIRRVVIKQLICHFVLDMAQIDDKLEIKFE 398

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L  +  +       ++     ++  +  G  ++ ++ 
Sbjct: 399 DYFAEDL--KLLQTFIDDKLVDITD-RKITISPTGRLLIRNIC 438


>gi|332882728|ref|ZP_08450339.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679230|gb|EGJ52216.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 352

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 14/352 (3%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            +     E+   ++      + +I+ GGGTPS++    +  + D I   + VS   EITI
Sbjct: 1   MVAVLCKELIMRKEEAVGSELQTIYLGGGTPSILTYDELKQLFDTIYSYYKVSPTAEITI 60

Query: 111 EANPSSV----EVNNF-QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           E NP             Q     G+NR+SLGVQS  E+ LR + R H  ++    + +A 
Sbjct: 61  ECNPDDFFRLHTPEQLLQQLTSLGINRLSLGVQSFFEEDLRLMNRVHTTTQVTTLLPIAS 120

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
             F  ++ DLIY +P  +  +W+  + +ALS+ + H+S Y LT+E+ T  ++    G + 
Sbjct: 121 QYFDNITIDLIYGIPMMSNERWKENIYKALSFEIPHISAYALTVEEKTALHRFIAIGKIP 180

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
              +  A   ++   +I    G   YE SN    G  S +N  YW    Y+GIGP AHS 
Sbjct: 181 PIDDTQAYTHFHTLINILEKEGFIQYEFSNFGKEGYFSQNNTAYWFGKPYMGIGPSAHSF 240

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                        K    +++ +++      E E L+ + + +E ++  +R   GI +++
Sbjct: 241 SGFKRSWNIAHNIK----YIQQIQQGILP-QEIEILTPDNRYNELIITRIRTMVGIDLEE 295

Query: 346 WEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              + G+          ++   +G +  ++ + L+ T+ G  + D + ++L 
Sbjct: 296 VNNVFGKEYQQYLLTQAKKYISKGLL-CIKENHLKVTKDGKFLSDGIASDLF 346


>gi|256419733|ref|YP_003120386.1| coproporphyrinogen III oxidase [Chitinophaga pinensis DSM 2588]
 gi|256034641|gb|ACU58185.1| oxygen-independent coproporphyrinogen III oxidase [Chitinophaga
           pinensis DSM 2588]
          Length = 452

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 89/411 (21%), Positives = 161/411 (39%), Gaps = 29/411 (7%)

Query: 3   YLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +  A   +         + +Y+H P+C + C YC  N H+      +  +I S L E   
Sbjct: 33  WKQALLQSFRATNDTEGISIYIHLPYCEQLCTYCGCNKHITVNHGVEAPYIDSLLKEWSL 92

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             +L   R  I  I  GGGTP+   P+N+  +L GI     +  +  ++ E +P++    
Sbjct: 93  YLELFKKRPRIREIHLGGGTPTFFSPENLHQLLSGIYMQADLLPDATLSFEGHPNNTTTA 152

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           +       G  R+SLG+Q  + Q    + R             AR I    +++DL+Y L
Sbjct: 153 HMLTLYNLGFRRMSLGIQDFDPQVQDIINRIQPYETVERVTAAAREIGYTSINYDLVYGL 212

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+T  +  + + +    D +S Y              +  +  LP +     LY L 
Sbjct: 213 PLQTITSVKDTISKVMQLRPDRISFYSYAHVPWVKGVGQRRYAEEDLPKDEEKRALYELG 272

Query: 240 QSITSAHGLHAYEISNHSFLGAESLH--------NLNYWRYGDY---IGIGPGAHSRVKV 288
           +++ +  G     + + +    +SL+        + N+  Y D+   + IG GA S    
Sbjct: 273 KTMFAESGYTEIGMDHFALP-HDSLYHACKQGSLHRNFMGYTDHHTSLMIGLGASSI--G 329

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            S       EK   +W ++V      VV    L +E       +  L    G+  +    
Sbjct: 330 DSWYAYAQNEKKITTWQQLVNSGQFPVVRGHILDTEDLLLRRHIHALMC--GLDTRW--- 384

Query: 349 LAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               N+D   E +LQR       G ++ +Q+  +  T++G   + ++    
Sbjct: 385 TPDDNIDSVMEESLQRLTELEKDGLVD-IQYGSVTVTEKGRPFIRNICMAF 434


>gi|283782250|ref|YP_003373005.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
 gi|283440703|gb|ADB19145.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
          Length = 436

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 4   LSAYENNMTGQG--SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           L A E+ +         LG+Y+H PFC K+C +C F  +  +     E ++ +   E++ 
Sbjct: 29  LPAVESALHSPPLHDEPLGLYLHIPFCRKRCKFCYFRVYTDKNASDVETYVSALSREIEL 88

Query: 62  MRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           + +L   G R    ++FGGGTPS +  + +  ++D +  N       E+T E  P ++  
Sbjct: 89  VSKLPIMGGRPFRFVYFGGGTPSFLSAKQLTSLVDRLRANINWDQAEEVTFECEPGTLSQ 148

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 ++ GV R+SLGV++  +  L   GR H + E   A    +   F  ++ DLI  
Sbjct: 149 PKIVTLKELGVTRLSLGVENFSDAVLEENGRAHLSGEVYKAWDWIKAADFANVNIDLISG 208

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV--AVDLY 236
           +  ++   W+  +++ +  + D +++YQL +   T++ K        +P  +        
Sbjct: 209 MVGESWDNWQENIKKTIELSPDSVTIYQLELPFNTVYSKDILGNTREIPVADWPTKRAWL 268

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESLHNLNY----WRYGDYIGIGPGAHSRVKVGSHR 292
           +       A G H    S ++ +   +  N +Y    WR  D +  G  +        ++
Sbjct: 269 SFAYDELQAAGYHV--SSAYTLVKDPTKVNFSYRDNLWRGSDLLSTGVASFGHASGVHYQ 326

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAG 351
                  + +S   ++ +N   +      +S Q     L+  L L++G +    +    G
Sbjct: 327 NKTEWGDYTKS---LLEENKLPLYRGMKPTSHQLLIRELI--LNLKKGYLDTSYFTHKFG 381

Query: 352 RNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            N+        Q     G++  +   R+  T++G+   D+++    
Sbjct: 382 VNVLEHFADVWQSHVDDGYLT-IDGDRVNLTRQGLLHADAMLPPFF 426


>gi|195954007|ref|YP_002122297.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195933619|gb|ACG58319.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 349

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 33/376 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H P+C  KC YCDF S V +      ++    L E++          I +++FGGG
Sbjct: 6   HLYIHIPYCSSKCHYCDFYSVVEKEDN---SYFDILLEELKLY---DFDYDIKTVYFGGG 59

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS+ +P++  L    +     +S   E+T+E NP   E ++F+     G+NR+S GVQS
Sbjct: 60  TPSIFKPKHYNLFFKKLKNLIDLSKVEEVTMELNPKDYEKDDFKELYDIGINRLSFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E  L +LGR H   +AI +I  A+   F  ++ D+I+ +P QT  ++  +++ A+S+ 
Sbjct: 120 FNEHHLLWLGRTHKKEDAIKSILYAKEAGFENINLDIIFGMPDQTKEEFLEDIETAISFE 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             HLS Y L    GT  Y    +       E+     Y L +      G   YEISN + 
Sbjct: 180 PTHLSFYMLIYYPGTALYSKKDEQK----HEDDIALFYELLRKTLK--GYIHYEISNFAK 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN+ YW Y +Y+G+GPGAHS+V+        S  K    + + + K   ++   
Sbjct: 234 KEHESKHNMAYWEYKNYLGLGPGAHSKVEA----FMFSNPKDINLYKENLLKKQLSLK-- 287

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
             L+ E+     ++MGLR  +G+    + +    +L     +           +  R+  
Sbjct: 288 -ALNEEEHKKNKIIMGLRTIKGVD--SYLLKIPHHLKDFFSK-----------KDGRVFI 333

Query: 379 TQRGMTMLDSVIANLA 394
                 + +++I+ + 
Sbjct: 334 KPEFWLVSNAIISEVI 349


>gi|294138853|ref|YP_003554831.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           violacea DSS12]
 gi|293325322|dbj|BAJ00053.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           violacea DSS12]
          Length = 458

 Score =  255 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 165/403 (40%), Gaps = 29/403 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            ++    S+ L +Y+H P+C K C YC  N  + R++   + +++   TE+     L   
Sbjct: 44  TSIKNSKSDKLSLYIHIPYCAKICYYCGCNKVITRHQHKADQYLEYLATEIIKRAPLFKD 103

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++ I +GGGTP+ + P  I  + + I  N+ V+   E +IE +P  +E+      ++A
Sbjct: 104 YLVTQIHWGGGTPTFLRPDQILNLSELIKANFNVAEVGEYSIEVDPREIELTMLDTLKEA 163

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ   ++    + R  +       +  A+   F   + DLIY LP QT   +
Sbjct: 164 GFNRISIGVQDFNKKVQIAVNREQDEQFIFDLMAKAKELGFVSTNIDLIYGLPHQTPATF 223

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +QR L    D LS++       + F    K  D  L S    +++ + T    +  G
Sbjct: 224 AETMQRVLDLDPDRLSVFNYAHLP-SRFAAQRKIKDEDLASPQQKLEMLHQTIETLTGAG 282

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D +G+G  + S++     +   
Sbjct: 283 YQYIGMDHFAKPDDELAILQNEGRLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQN-- 340

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK--------DWE 347
             +K    + + +  NGHA+ +   L+ + +    ++  L     + +          +E
Sbjct: 341 --QKDIRPYFESIDANGHALWKGCDLNRDDEIRRVVIKQLICHFELDMAQIDDKLDIQFE 398

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                +L  +  +       +  +   ++  +  G  ++ ++ 
Sbjct: 399 DYFHEDL--KLLQTFIDDKLV-NIADRKITISPTGRLLIRNIC 438


>gi|83645082|ref|YP_433517.1| coproporphyrinogen III oxidase [Hahella chejuensis KCTC 2396]
 gi|83633125|gb|ABC29092.1| oxygen-independent coproporphyrinogen III oxidase [Hahella
           chejuensis KCTC 2396]
          Length = 458

 Score =  255 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 157/404 (38%), Gaps = 30/404 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-P 68
             +   + SL +Y+H PFC + C YC  N  + + +     ++ +   E+    +L G  
Sbjct: 44  AASRATNRSLSLYLHIPFCARLCYYCACNKIITKRREKAIPYLNALYREIALQSELFGAD 103

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYR 126
           R +  + +GGGTP+ + PQ +  +++ +  ++    N   + +IE +P   +       R
Sbjct: 104 RLVEQLHWGGGTPTFLAPQQMRDLMNELRTHFRFMDNDQGDYSIEIDPREADDETLTTLR 163

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
           + G NRISLGVQ       + + R  +    +  +H AR   F  ++ DLIY LP QT  
Sbjct: 164 EIGFNRISLGVQDFNPAVQKAVNRIQSEELTLGVLHKARELGFRSINIDLIYGLPLQTPD 223

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   +   + +A D LS++         F    +  D  LP     + +   +     A
Sbjct: 224 SFRKTVDTIIDFAPDRLSVFNYAHMPQ-RFMPQRRIRDEDLPRPEDKLTILQQSVDQLIA 282

Query: 246 HGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
                  + + +  G E         LH  N+  Y      D I +G  + S +    ++
Sbjct: 283 ADYRFIGMDHFAKPGDELSIAQEKGELHR-NFQGYTTHGDCDLIAMGASSISMLDRCYYQ 341

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                    ES+   + +N   +++   L+ +      +++ L     I  +  E L   
Sbjct: 342 NCY----DQESYETAMAENRLPIIKGVQLNDDDVIRRKVIVELICNFKIDYRRIEALFNI 397

Query: 353 NLDIE------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +            ++++  G +   +   +     G  ++  V 
Sbjct: 398 DFAQYFHGELNILQDMEEDGLVTFTRNG-MHVNPTGRLLIRGVC 440


>gi|254525933|ref|ZP_05137985.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9202]
 gi|221537357|gb|EEE39810.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prochlorococcus marinus str. MIT 9202]
          Length = 407

 Score =  255 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 113/403 (28%), Positives = 194/403 (48%), Gaps = 35/403 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENF----IQSFLTEM-QWMRQLTGP 68
                  Y+H PFC ++C YCDF       KV   E +    ++ +L  + + +  +   
Sbjct: 2   NKYPRSAYIHIPFCHRRCFYCDFAVIPLGNKVDTLEGYGSKTVKEYLNFLYKEILSIKHK 61

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
            S+S+I+ GGGTPS+++P+ I  ++D   +N+ +    EIT+E +P+S   ++  G+  A
Sbjct: 62  SSLSTIYLGGGTPSILDPKQIKELIDIFRENYGIDYGAEITMEVDPASFNQDDLYGFIHA 121

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-----NIFPRMSFDLIYALPKQT 183
           G+NR SLGVQS   Q L   GR H   +A  +    +      +    S DLI  LP   
Sbjct: 122 GINRFSLGVQSFNNQILEKSGRRHLREDAEKSCLWLKREYDSGLIKSWSLDLIQNLPLSG 181

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +W+ +L++A++++  H+S+Y L IE GT+F K+   G L LPS+  A      T  I 
Sbjct: 182 YKEWQDDLKKAITFSPPHISIYDLNIENGTVFKKLVNLGKLKLPSDEEAFRNSESTHLIL 241

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              G   YEISN+     +S HN  YW    +   G G+ S    G       + K  + 
Sbjct: 242 KNSGYSRYEISNYCLPRHQSRHNRVYWSGLGWWSFGQGSTSS-PWGEKLTRPRVSKEYKE 300

Query: 304 WLKMVRKNG----HAVVEKEFLSSEQQADEFLMMGLRLREGISV-----------KDWEM 348
           W+  +R+       +++ ++F+  E   DE +M+GLRL+EG+ +           K +E 
Sbjct: 301 WV--IRQYEVDLDSSLINRDFVYKE--LDEKIMLGLRLKEGVDIKGVFKEQNWENKKFES 356

Query: 349 LAGRNLDIECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVI 390
              + L+          G + + + +R   +  +GM + + ++
Sbjct: 357 NYSKLLEE--WEKFLESGLLVK-KGNRFFLSDPKGMELSNQIL 396


>gi|189347434|ref|YP_001943963.1| coproporphyrinogen III oxidase [Chlorobium limicola DSM 245]
 gi|189341581|gb|ACD90984.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           limicola DSM 245]
          Length = 473

 Score =  255 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 168/394 (42%), Gaps = 23/394 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +E ++++   E Q       G  ++  +
Sbjct: 49  TTGISMYIHIPYCENYCYFCGCNAHRTQDHSFEEPYLEALQKEWQMYLDVFPGTLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+A +++ + +      N   + E NP S    + +   + G  R+S
Sbjct: 109 HIGGGTPTFFSPENLARLVENLFRTVNRMDNYMFSFETNPRSTSKEHLEALYRVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQT+      + +
Sbjct: 169 FGIQDFDPVVQQEINRPQSFELVKEKVDLARQIGFTSVNFDLVYGLPKQTLATITDTIDK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +V  +LY+  +++  + G H   +
Sbjct: 229 VMQLRPDRLAFYAYG-HNPHMYEGQRKFKEEDLPVGDVKQELYDKGRAMLESIGYHEIGM 287

Query: 254 SNHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G +SL+        + N+  Y +      I +G  + S       +     +K 
Sbjct: 288 DHFALEG-DSLYLAAKDGSLHRNFMGYTENTTQMMIALGASSISDTWYAFAQNERGDQK- 345

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECE 359
              +++ + K    ++    L+ E       ++ L  R+  S +D +M     ++     
Sbjct: 346 ---YIEEINKGRFPILRGHLLTDEDLVLRRHILNLMCRQETSWEDPKMYTEELDIARYRL 402

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +++  G +  ++   +R T+ G+  L ++    
Sbjct: 403 EDMENDGLVVLLENG-VRVTEIGIPFLRNICMAF 435


>gi|71906687|ref|YP_284274.1| coproporphyrinogen III oxidase [Dechloromonas aromatica RCB]
 gi|71846308|gb|AAZ45804.1| coproporphyrinogen III oxidase, anaerobic [Dechloromonas aromatica
           RCB]
          Length = 471

 Score =  255 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 78/393 (19%), Positives = 154/393 (39%), Gaps = 29/393 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SI 71
           S  L +Y H PFC   C YC  N  + +       +++    E++        R     +
Sbjct: 60  SRPLSLYFHIPFCNTICYYCACNKIITKDHGRSAKYLKYLAKELEIQAAALEGRDGEHEV 119

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             + +GGGTP+ +    +  ++    K++ +    E +IE +P  V+        + G N
Sbjct: 120 IQLHWGGGTPTFLSHSEMRQLMGETRKHFKLLDGGEYSIEVDPRKVDTATVALLGELGFN 179

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQ  +E+    + R  +  E  + I  AR N F  +S DLIY LP QT+  +   
Sbjct: 180 RMSVGVQDFDEKVQVAVNRVQSEEETYSVIRDARANGFKSVSVDLIYGLPHQTVMGFNRT 239

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+R L+   D LS+Y       ++F    +  +  LPS +  + +  L     +  G   
Sbjct: 240 LERVLAMDPDRLSIYNYAHMP-SMFKPQRRINEGDLPSADTKLQILALAIKKLTDAGYVF 298

Query: 251 YEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +           +   + N+  Y      D +  G  + S+V    ++      
Sbjct: 299 IGMDHFAKPDDELAVAQRQGRLHRNFQGYSTYADCDMLSFGISSISKVGPTYYQNV---- 354

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML----AGRNL 354
           K  + +   +  +   V     L+++      ++  L     +S++  E        +  
Sbjct: 355 KTADEYYDRLDTDTLPVFRGIELTADDILRRSIIQALMCHFELSIESIESAHLIDFHKYF 414

Query: 355 DIECE--RNLQRQGFIERVQFSRLRCTQRGMTM 385
             E E  + ++R G + ++    +     G  +
Sbjct: 415 AAELEDMKEMERAGLL-KIDREWITVLPPGRLL 446


>gi|332971027|gb|EGK09998.1| oxygen-independent coproporphyrinogen III oxidase [Kingella kingae
           ATCC 23330]
          Length = 511

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 79/451 (17%), Positives = 162/451 (35%), Gaps = 71/451 (15%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+   EN +       + +Y+H PFC   C YC  N  + +     + ++     EM  +
Sbjct: 47  YIQTLENTL-KDSDKPVSLYIHIPFCNVICYYCGCNKVITKDTSKADEYLNYLEKEMALL 105

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  L G   ++ + FGGGTP+ +  + +  + + I +++ +  + E +IE +P  V   +
Sbjct: 106 KPHLHGKHKLAQLHFGGGTPTFLNDEQLERVFNMIREHFELLPDGEYSIEIDPRKVSRES 165

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                + G NR+S+G+Q  + +    + R     E    I  AR   F  +S DLIY LP
Sbjct: 166 VFKLAQLGFNRMSVGIQDFDPKVQAAVNRIQTVEETKNVIDSAREAGFKSISVDLIYGLP 225

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++   +  L   LS   D L+LY        +F    +     +PS    +D+     
Sbjct: 226 HQSVQSIKPTLDTVLSLNPDRLALYHYAHLPH-IFKPQRRIDTNTVPSSEEKLDILQYAV 284

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
            + +  G     + + +           E     N+  Y      D + IG  +  ++  
Sbjct: 285 HLLNERGYVFIGMDHFAKPEDELAIALREGRLQRNFQGYSTYADCDLVAIGVSSIGKIGN 344

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD--- 345
              +     +++ E +   +  +   ++    L+ +      ++  L  R  ++  D   
Sbjct: 345 TYSQN----QRNLEDYYADLDADKLPIMRGFELNDDDVLRRQIIQDLMCRFSLNFDDYLP 400

Query: 346 ---------------------------------------------WEMLAGRNLDIEC-- 358
                                                        ++         E   
Sbjct: 401 SLPQSNQVQAASDAADEAELAHMKKLADLGIISADLLHRFKEIDQYKHPFADYFAAELNR 460

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            + L + G +E+ + S L  T +G  ++ ++
Sbjct: 461 LQELVQLGLVEQNESS-LHVTPKGRFLIRNI 490


>gi|121608145|ref|YP_995952.1| coproporphyrinogen III oxidase [Verminephrobacter eiseniae EF01-2]
 gi|121552785|gb|ABM56934.1| oxygen-independent coproporphyrinogen III oxidase
           [Verminephrobacter eiseniae EF01-2]
          Length = 460

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 158/412 (38%), Gaps = 32/412 (7%)

Query: 2   KYLSAYEN--NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+ A E   +     +  L +YVH PFC   C YC  N  + R+      +++    E+
Sbjct: 36  DYVLALEQRRSCAMAKAQPLSLYVHIPFCESLCYYCACNKIITRHPERATVYLRYLAREI 95

Query: 60  QWMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                  G  + +S +  GGGTP+ +    +  ++  + +++ ++   E +IE +P +V+
Sbjct: 96  ALQTTHCGVGQVVSQLHLGGGTPTFLADAGLRELMAMLQRSFALAPGGEYSIEVDPRTVD 155

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
            +      + G NR+SLGVQ  +    + + R   A +  A +  AR   F  ++ DLIY
Sbjct: 156 ADRLACLAELGFNRLSLGVQDFDAGVQKAVHRAQPAEQVFALLQAARAQGFDSVNIDLIY 215

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+QT   +E  L + +    + ++LY         F    +     LP+    +++  
Sbjct: 216 GLPRQTPESFERTLAQTVQLRPERIALYAYAHLPE-RFKPQRRIVSAELPAAAAKLEMLA 274

Query: 238 LTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYG-----DYIGIGPGAHSR 285
                  A G     + + +           +   + N+  Y      D IG+G  A  R
Sbjct: 275 RALDAFIAAGYVYVGMDHFALPSDALAVAKRQGRLHRNFQGYSTQPDCDLIGLGVSAIGR 334

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK- 344
           V     + A    K  + +   + +    VV    L+ +       +M +  +  +  + 
Sbjct: 335 VGASYSQNA----KTLDEYYDFLDQGRLPVVRGLALTRDDLVRRAAIMAIMCQGELLFEP 390

Query: 345 -------DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                  D+       L      NL  QG + R+    +  +  G   +  +
Sbjct: 391 MEQAWLIDFRQYFAVELAQ--LENLAEQGLV-RIGPESVTVSATGWFFVRGI 439


>gi|315633687|ref|ZP_07888977.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           segnis ATCC 33393]
 gi|315477729|gb|EFU68471.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           segnis ATCC 33393]
          Length = 455

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 81/407 (19%), Positives = 164/407 (40%), Gaps = 27/407 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            +++A +       +  L +YVH PFC K C +C  N  + R++   + ++     E++ 
Sbjct: 38  DFIAAAQR----YPTRPLSLYVHIPFCHKLCYFCACNKVITRHQHKADIYLDFLEREIKE 93

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L   R  + + +GGGTP+ +     A ++  +  N+ ++ N EI+IE +P  +E++ 
Sbjct: 94  RSTLFTNRVATQVHWGGGTPTYLTEAQSARLMQMLRDNFNIADNAEISIEMDPREIELSM 153

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
            +  R  G NRIS+GVQ   +   + + R  + +   A +  AR   F   + DLIY LP
Sbjct: 154 LEHLRNIGFNRISMGVQDFNKDVQKAVNREQDETFVNALLMRARELGFQSTNLDLIYGLP 213

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++  +   L++ +    D LS++       + F    K  D  LP     +++   T 
Sbjct: 214 FQSVESFMFTLKKVIELNPDRLSVFNYAHLP-SRFAGQAKIKDWQLPKPETKLEILQKTI 272

Query: 241 SITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKV 288
               + G     + + +    E   +  N     N+  Y      D +G+G  A S +  
Sbjct: 273 ETLGSAGYKFIGMDHFAKPDDELAIAQQNGVLHRNFQGYTTQEECDLLGLGVSAISLLGD 332

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +     +K  + +   V  NG A+ +   +S E      ++  L     ++    E 
Sbjct: 333 TYAQN----QKDLKEYYTAVNTNGIALHKGLAMSEEDCLRRDVIKQLICNFKLAYAPLEK 388

Query: 349 LAGRNLDIEC-----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +                   +  +   ++  + +G  ++ ++ 
Sbjct: 389 QYNIDFKQHFAEDLALLAPLAADGLLDIGEEQITVSAKGRLLIRNIC 435


>gi|148825257|ref|YP_001290010.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittEE]
 gi|148715417|gb|ABQ97627.1| coproporphyrinogen III oxidase [Haemophilus influenzae PittEE]
          Length = 309

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 14/305 (4%)

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           +   ++IA +L  I K     +N+EIT+EANPS+VE   F+GY  AG+ RIS+G+QS  +
Sbjct: 1   MFSSESIAHLLKEIKKQIDFENNIEITLEANPSTVEAKRFKGYVSAGITRISMGIQSFND 60

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             LR LGR HNA+EA +A++LA+       + DL++ LP QT+ +   +L++A+  +  H
Sbjct: 61  DKLRRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQAIELSPPH 120

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           +S YQLTIE  T+F          LP ++   D++     + +A G   YE S ++  G 
Sbjct: 121 ISWYQLTIEPNTMFAYRPPK----LPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKTGF 176

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEF 320
           +  HNLNYWR+GDY+ IG GAH ++   +  +   S  K P+ +L+     G  + E++ 
Sbjct: 177 QCKHNLNYWRFGDYLAIGCGAHGKLTFPNGEITRFSKTKPPKGYLR-----GEYLYEEKN 231

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSRLRC 378
           +    +  EF M   RL E +  +++E   G +            +Q +I     S  + 
Sbjct: 232 VPEIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIVENADS-WQI 290

Query: 379 TQRGM 383
           T+ G 
Sbjct: 291 TEHGK 295


>gi|251791897|ref|YP_003006617.1| coproporphyrinogen III oxidase [Aggregatibacter aphrophilus NJ8700]
 gi|247533284|gb|ACS96530.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           aphrophilus NJ8700]
          Length = 455

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 164/403 (40%), Gaps = 23/403 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            +        +  L +YVH PFC K C +C  N  + R++   + ++     E++   +L
Sbjct: 38  DFIAATQRYPARPLSLYVHIPFCHKLCYFCGCNKVITRHQHKADIYLDFLEKEIKERSKL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R  + + +GGGTP+ +  +  A +++ + +++ ++ N E++IE +P  +E++  +  
Sbjct: 98  FTNRVATQVHWGGGTPTYLTEEQSARLMNMLREHFNIAENAEVSIEMDPREIELSMLEHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NRIS+GVQ   +   + + R  + +   A +  AR   F   + DLIY LP QT+
Sbjct: 158 RNIGFNRISMGVQDFNKDVQKAVNREQDEAFVNALLIRARELGFQSTNLDLIYGLPLQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQ+ +    D LS++       + F    K  D  LP     +D+   T     
Sbjct: 218 ESFMFTLQKVIVLNPDRLSIFNYAHLP-SRFAGQAKIKDWQLPKPETKLDILQKTIQTLG 276

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +    E        + + N+  Y      D +G+G  A S +     +
Sbjct: 277 NAGYKFIGMDHFAKPDDELAIAQQKGILHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  +++   V + G A+ +   ++ E      ++  L     ++    E     
Sbjct: 337 N----QKDLKTYYANVDETGIALHKGLAMTEEDCLRRDVIKQLICNFKLAYAPLEKQYHI 392

Query: 353 NLDIEC-----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +                   +  +   ++  + +G  ++ ++ 
Sbjct: 393 DFKQHFAEDLALLAPLAADGLLEIGDEQMVVSAKGRLLIRNIC 435


>gi|313673474|ref|YP_004051585.1| oxygen-independent coproporphyrinogen iii oxidase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940230|gb|ADR19422.1| oxygen-independent coproporphyrinogen III oxidase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 365

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 114/376 (30%), Positives = 184/376 (48%), Gaps = 25/376 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              G+Y+H PFC  KC YC F S     +  +  +I + L E++  + L    SI +I+ 
Sbjct: 2   KDYGLYLHIPFCKSKCKYCGFYS-TLHNEETEYAYINAILREIKTYKGL----SIDTIYI 56

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++ QN+ ++L+ + +N+ V +  E T+E NP SV  +  +  +  GV+RISLG
Sbjct: 57  GGGTPSTLKLQNMKVLLEALYENF-VPNIKEFTVEINPESVTEDMLKLLKDYGVDRISLG 115

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QSL +  L  LGR H++  A  AI L  N    ++ D+IY +P          L+    
Sbjct: 116 IQSLFDNVLCLLGRVHSSFRARRAIELILNYGLELNCDIIYDIPTVNHDFTLKTLEILTD 175

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y + H+S Y  +    T F   +KD D        A   +N       + G   YEISN 
Sbjct: 176 YPIKHISAYNYSF--DTDFLSEYKDTD--------AETFFNDVVDFLYSRGFFQYEISNF 225

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G  S HN  YW+  DYIG G  AHS +   + R+    +   E ++K        ++
Sbjct: 226 ARNGKGSKHNTKYWKMQDYIGFGISAHSMMNGENARMRWCNKGTVEEYIK-----EQYII 280

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQF 373
           EK  +   +   E ++ G+R+ +G++++  +   G  +  E  +    L+ + FI   + 
Sbjct: 281 EKYEVPIAECFIEDVVFGIRMVDGVNIESLKSKYGGEVVEEFMKKIVFLKDENFI-CYER 339

Query: 374 SRLRCTQRGMTMLDSV 389
             L  T++G   LDSV
Sbjct: 340 GCLCLTRKGQLYLDSV 355


>gi|307824270|ref|ZP_07654496.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
 gi|307734650|gb|EFO05501.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacter
           tundripaludum SV96]
          Length = 460

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 156/399 (39%), Gaps = 24/399 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
           +      L +Y H PFC   C YC  N  V + +   E ++ +   E+     L    R 
Sbjct: 48  SNAAGGPLSLYFHIPFCDTVCFYCACNKIVTKNRKHAEPYLANLCKEIALQGDLFDSNRV 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           ++ + +GGGTP+ +  + +  ++    +++ +      E +IE +P        +  R+ 
Sbjct: 108 VNQLHWGGGTPTFLSYEQMTTLMAVTREHFHLRADDKGEYSIEVDPRETNDQTMKQLREL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           G NR+SLG+Q  +    + + R  +  +  + +  AR   F   + DLIY LP QT+  +
Sbjct: 168 GFNRVSLGLQDFDPAVQKAVNRLQSEEQTFSVLEAARAEGFRSTNIDLIYGLPLQTVETF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            + L + L+ + D  S++       T F    +  D  +PS +V + +  +     +  G
Sbjct: 228 ALTLDKILAVSPDRFSIFNYAHMP-TRFKIQRQINDADMPSPDVKLAILQMVGQRLTDAG 286

Query: 248 LHAYEISNHSFL----------GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
                + + +            G    +   Y  + D   +G G  S  +VG   +    
Sbjct: 287 YVYIGMDHFAKPDDELAVAQREGHLYRNFQGYSTHSDCDLVGLGITSIGRVGDAYI--QN 344

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--- 354
            K  E + +++ +    V +   L  + +    ++  L     +S    E     +    
Sbjct: 345 VKELEEYDQLISQGQLPVFKGVELDDDDKLRRAVITQLICHFDLSFAAIEQQFTIHFTDY 404

Query: 355 ---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              ++E    +Q  G +  V    ++    G  ++ ++ 
Sbjct: 405 FAQELEALAPMQADGLL-FVSGEGIKVLSSGRLLIRNIC 442


>gi|227821562|ref|YP_002825532.1| coproporphyrinogen III oxidase [Sinorhizobium fredii NGR234]
 gi|227340561|gb|ACP24779.1| HemN coproporphyrinogen III oxidase [Sinorhizobium fredii NGR234]
          Length = 450

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/408 (19%), Positives = 156/408 (38%), Gaps = 26/408 (6%)

Query: 6   AYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            Y + +          +Y+H PFC   C YC  ++ + +      +++     E+  +  
Sbjct: 34  TYRDWLAATPLDRPASLYLHIPFCRSMCWYCGCHTTITQRDQPILDYLDMLRQEIGLVAA 93

Query: 65  LT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            T  P +I  + FGGGTP++++P+ +  ++  + + +  +   EI +E +P ++E     
Sbjct: 94  RTKAPLNIDHVHFGGGTPTIMQPEEMLALVRLLRERFDFADTAEIAVEIDPRTLEQEMAT 153

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
              +AGV R SLGVQS +    + + R  +  + + A+   R      ++FDLIY LP Q
Sbjct: 154 ALGEAGVRRASLGVQSFDPVVQKAINRIQSEEQTMEAVSRLRRAGVDSINFDLIYGLPHQ 213

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+       + A++   D  +++       +         +  L      V       + 
Sbjct: 214 TVESCIETAKAAIAMGPDRFAVFGYAHIP-SFKKHQKLIDEKALADAEGRVAQAEAIAAT 272

Query: 243 TSAHGLHAYEISNHSFLG---AESLHN----LNYWRY-----GDYIGIGPGAHSRVKVGS 290
             A G     + + +      A +  N     N+  Y        IG G  A  R+  G 
Sbjct: 273 LVAAGYRRIGLDHFARPDDSLALAQQNGQLRRNFQGYTTDACETLIGFGASAIGRMTDGY 332

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +  I     P  + + +     A V+   L++E +    ++  L     + V       
Sbjct: 333 VQNEIP----PGVYAQRIASGRLATVKGYRLTAEDRLRANIIERLMCDFRVDVPAIAAAH 388

Query: 351 GRNLDI-----ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           G +  +          L+  G +E V    +R    G  ++ +V A  
Sbjct: 389 GFDPQMLLHGNAKLAMLESDGILENV-GGVIRLRDEGRFLIRAVAAAF 435


>gi|152990113|ref|YP_001355835.1| coproporphyrinogen III oxidase [Nitratiruptor sp. SB155-2]
 gi|151421974|dbj|BAF69478.1| oxygen-independent coproporphyrinogen III oxidase [Nitratiruptor
           sp. SB155-2]
          Length = 455

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 87/411 (21%), Positives = 157/411 (38%), Gaps = 29/411 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
             Y    E     +    L +Y H PFC   C +C  N      +  +E +I     E+ 
Sbjct: 30  FSYERYIEKLHAQKDETPLSLYFHLPFCRSACYFCGCNVVFTSKEDKKERYISYLQKELD 89

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVE 118
            ++    P R +  + FGGGTP+   P+ +  I+  I +     SS  E++ E +P  + 
Sbjct: 90  ILKNHINPDREVIQLHFGGGTPTFFSPEQLQRIVASIKEVFGNWSSEAEVSCEIDPRFLS 149

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIY 177
             + Q   + G NR+S GVQ   EQ  + + R  +  E   A+ LAR      ++ DLIY
Sbjct: 150 EEHMQVLSEGGFNRVSFGVQDFNEQVQQAVHRIQSFEETKMAVDLARKYGMQSVNIDLIY 209

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  ++  L   L    D L+++        L   M K  +  LP+ +V + +  
Sbjct: 210 GLPFQTLESFKKTLDMTLQLDPDRLAVFNYAHVP-WLKKTMRKIDETTLPTPDVKLQILK 268

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHS 284
            T    +++G     + + +    E         LH  N+  Y      D IGIG  +  
Sbjct: 269 YTIDFFTSNGYKMIGMDHFAKPDDELFRAIEKGELHR-NFQGYTTKGGADLIGIGLTSIG 327

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                         K  + +   + +          L  + +  + ++M L     + + 
Sbjct: 328 ----EGEDYYAQNFKEMQEYEAAIDEGRLPFHRGVELGFDDKVRKAVIMELMANFKLDIP 383

Query: 345 DWEMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSV 389
             E   G +     +  LQ       +G +  +Q   +  +  G  ++ ++
Sbjct: 384 RIEKEFGIDFKDYFQEALQDLKEFEDEGLVT-IQDDAIEVSPTGTLLIRNI 433


>gi|209517092|ref|ZP_03265939.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
 gi|209502485|gb|EEA02494.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           H160]
          Length = 461

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 148/397 (37%), Gaps = 30/397 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
            G  S  L +Y H PFC   C YC  N  V + +     +++    E+          R 
Sbjct: 48  PGAASTDLSLYFHIPFCDTVCFYCGCNKVVTKNRAHARPYLERLKREIGLQAASFDTRRP 107

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKA 128
           +S + +GGGTP+ +    +A ++    +++ +  +   E +IE +P     +     R+ 
Sbjct: 108 VSQLHWGGGTPTFLSHDEMAELVAATREHFQLLPDGEAEYSIEVDPREASPDTIALLRRL 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
           G NR+SLGVQ  + +  + + R        + I  A  + F  +  DLIY LP QT+  +
Sbjct: 168 GFNRLSLGVQDFDPRVQQAINRIQPFEMTASVIQAARMHGFHSIGVDLIYGLPHQTVASF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L   L  A D LS++        +F    +     LPS    + L        +  G
Sbjct: 228 SRTLDTMLGLAPDRLSVFGYAHMPQ-IFKMQRQMDPATLPSSEQRLALLQRVVEQLTEAG 286

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      D IG G  +  +V     + A
Sbjct: 287 YVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIGKVGDVYAQNA 345

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               +   ++   +     A+     LS++      ++  L     +   ++E   G   
Sbjct: 346 ----RELPAYTDAIDAGRLAIARGIRLSADDSLRRDVITQLMCNLELRFDEFETAYGIRF 401

Query: 355 ------DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
                 ++   R  +  G I  +   +L+    G  +
Sbjct: 402 ADTFAPELARLRAFEDDGLIS-LGARKLKVRMAGRML 437


>gi|289208685|ref|YP_003460751.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
 gi|288944316|gb|ADC72015.1| oxygen-independent coproporphyrinogen III oxidase [Thioalkalivibrio
           sp. K90mix]
          Length = 462

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/401 (19%), Positives = 149/401 (37%), Gaps = 28/401 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS 73
            +  L +YVH PFC   C YC  N  +        +++ S   E+    +     R +  
Sbjct: 52  AARPLSLYVHVPFCDTVCFYCACNKVITGNYRRATSYLDSLEQEIALQGEWFDRDRPVRQ 111

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + FGGGTP+ +  +++  ++  + +++T+      E +IE +P +V           G N
Sbjct: 112 LHFGGGTPTYLSDEDLTRVMKALGRHFTLETGPEREFSIEIDPRAVRPGTLPLLASLGFN 171

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+GVQ ++    + + R         A+  AR   F   + DLIY LP QT+  +   
Sbjct: 172 RISVGVQDVDPAVQKAVNRIQPFEVTEQAVRQAREHGFVSTNLDLIYGLPLQTVDTFSAT 231

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L R L    + L++Y        LF    +  D  LP     + +  +T    +  G   
Sbjct: 232 LDRVLELRPERLAVYNYAHLPE-LFKTQRQIRDGDLPPATEKLAVLEMTIQRLTDAGYVY 290

Query: 251 YEISNHSFLG-----AESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +        A+    L  N+  Y      D + +GP A  ++     +    + 
Sbjct: 291 IGMDHFALPDDELAIAQRAGTLQRNFQGYSTRAEYDLVALGPTAIGKIGDSYSQNLREV- 349

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
              +++ + +      V     LS + +    ++  L     I     E   G +     
Sbjct: 350 ---DAYQERLAAGQLPVFRGLELSEDDRLRRAVISELMCHSRIDFGGIEATFGIDFRETF 406

Query: 359 ERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              L      +  G +  +    L    RG  +L ++    
Sbjct: 407 ADALNRLAEMEADGLVT-IGRDSLEVQPRGRLLLRNIAMAF 446


>gi|39934736|ref|NP_947012.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris CGA009]
 gi|192290258|ref|YP_001990863.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris TIE-1]
 gi|39648586|emb|CAE27107.1| putative coproporphyrinogen oxidase III [Rhodopseudomonas palustris
           CGA009]
 gi|192284007|gb|ACF00388.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 449

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 145/396 (36%), Gaps = 27/396 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
              + +Y+H PFC + C YC  N  +        ++++  + E+  +   L G   +  +
Sbjct: 44  DEPVSLYLHVPFCKQMCWYCGCNMKLAAKYDPVADYVEHLIDEIDLVADALPGTMPVRHL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP++I+PQ++  ++  + + +    + EI IE++P ++  +      + G  R S
Sbjct: 104 HFGGGTPTVIDPQDLGALMTLLRERFEFLPDAEIAIESDPRTLTEDMAAKIGELGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+ L ++    R++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQEAINRVQPPEMVARAMQLFKSAGVERINFDLIYGLPYQTAEDLRRTVEQ 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D ++L+        +        D  LP   +               G     I
Sbjct: 224 CVEMKPDRVALFGYAHVP-WVAKNQRMIPDESLPKPELRATQAETAAEALVKGGYVRIGI 282

Query: 254 SNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G           LH  N+  Y        IG+G  +  R   G  +        
Sbjct: 283 DHFALPGDSLAIAAKTGELHR-NFQGYTSDAAQTLIGLGATSIGRTPSGYVQNISET--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
             +W + V      V     L+ +      ++  +     + +       G   D     
Sbjct: 339 -GAWSRAVEAGKIPVARGHALTQQDNLRAHVIERIMCDGKVDLAAAGKAFGCGEDWYAPE 397

Query: 359 ---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                 LQR G +     S+L  T  G+ +   V +
Sbjct: 398 QDSLAELQRDGAVV-CNGSKLTLTPEGVRLSRVVAS 432


>gi|149173343|ref|ZP_01851973.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
 gi|148847525|gb|EDL61858.1| coproporphyrinogen III oxidase [Planctomyces maris DSM 8797]
          Length = 436

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 93/412 (22%), Positives = 181/412 (43%), Gaps = 36/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSL--GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +Y++     +      S+  G+Y+H PFC K+C +C F  + ++     E ++Q+   E 
Sbjct: 28  EYVTRIHEVLHQSPDTSIPMGLYIHIPFCRKRCKFCYFRVYEKQNAKTIERYVQALQQEF 87

Query: 60  QWMRQL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           + + Q+     R++   +FGGGTPS +  + +  + D ++   +  +  E+T E  P ++
Sbjct: 88  EMLSQVEAIKGRTLDFTYFGGGTPSYLSSKQLLSVRDRLSSLLSWETAKEVTFECEPGTL 147

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLI 176
                +  ++ G+ RISLGV+S  ++ L   GR H   E   A    +   FP+++ DLI
Sbjct: 148 NQEKVETLKEIGITRISLGVESFNDKLLEANGRAHLTPEVYKAYDWIQQVGFPQVNIDLI 207

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV--AVD 234
             +  +T   W   +++A  +A D++++YQ+ +   T+  K  K+  L  P  +      
Sbjct: 208 AGMMGETDENWSESVEKAAEFAPDNITIYQMELPHNTIISKEMKEMGLTSPIADWTTKRR 267

Query: 235 LYNLTQSITSAHGLH---------AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
             N       A G H           E           ++  N +R  D I  G  +   
Sbjct: 268 WMNEAIETLQAKGYHLASGNELVKNPETDRF-------VYRDNLFRGNDIIATGVSSFGH 320

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ-ADEFLMMGLRLREG-ISV 343
           ++   ++         E +L+ V K    +      S  Q+   EF+   L+L+EG +  
Sbjct: 321 MQGVHYQNLDR----LEDYLETVEKGDLPINRALEPSEHQRLIREFI---LQLKEGRVLT 373

Query: 344 KDWEMLAGRNLDIECERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIAN 392
           + ++   G +L  E    L+ Q   G++   +   ++ T++GM   DS++  
Sbjct: 374 QPFKDKFGVDLTEEFSEALENQQKAGYLTYDEAQ-VKLTRKGMLQADSLLTE 424


>gi|313200615|ref|YP_004039273.1| oxygen-independent coproporphyrinogen iii oxidase [Methylovorus sp.
           MP688]
 gi|312439931|gb|ADQ84037.1| oxygen-independent coproporphyrinogen III oxidase [Methylovorus sp.
           MP688]
          Length = 464

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 154/404 (38%), Gaps = 28/404 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-L 65
           +E   +      + +Y H PFC   C YC  N    R     E +++  L EM  +    
Sbjct: 38  HELQASRDSGRDISLYAHIPFCDTLCYYCGCNMVATRDYSKAERYLEVLLQEMALVADTA 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +  R +  + +GGGTP+ ++P ++  +    A  + ++ + EI  E +P  +   +    
Sbjct: 98  SADRLVRQMHWGGGTPTYLKPDDLVKLHQAFAGRFRMADDAEIGCEMDPRELSRAHVDAL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTM 184
              G NR+SLGVQ L+ Q    + R  +           R+     ++FDLI  LP QT 
Sbjct: 158 ASCGFNRLSLGVQDLDPQVQEAINRIQSQDLIEQVYGWIRDAGINSINFDLIIGLPHQTP 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            ++   L   ++ A D L+++        +        +  LP+ +  ++L  +T    +
Sbjct: 218 ERFAHTLDAVIAMAPDRLAVFNYAHVP-WMKKHQRLIPEAALPTLDQRLELLRMTLDRLT 276

Query: 245 AHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
           A G     + +++    E        SL+  N+  Y      D + +G  A S+ +    
Sbjct: 277 AAGYVHIGMDHYAKPEDELVRAQQQGSLYR-NFQGYTTHKDCDILALGASAISQTENAYA 335

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K    +   V      +     ++ E Q     +  +     +  + +     
Sbjct: 336 QNT----KVLSEYRDAVTAGRLPIERGLQVTPEDQLRRAAITQVMCELRLDKRAFSAAWN 391

Query: 352 RNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
            + D      L      Q+ G +  +Q   LR ++ G   L ++
Sbjct: 392 IDFDDYFAAALPQMEEMQQDGLLA-LQGDELRVSEIGRLFLRNI 434


>gi|328948021|ref|YP_004365358.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           succinifaciens DSM 2489]
 gi|328448345|gb|AEB14061.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           succinifaciens DSM 2489]
          Length = 390

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 18/392 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           NS  +YVH PFC+KKC YCDF S     ++    +++    E  +  +        +I+ 
Sbjct: 2   NSAALYVHIPFCLKKCSYCDFFSVENSGRIDN-LYLECLKNEAVFYAEKYKIDFWRTIYI 60

Query: 77  GGGTPSLIEPQNIALI---LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GGGTPSL+    I  +   L        ++  +E TIE NP SV         K G+ R+
Sbjct: 61  GGGTPSLLSASQIEKLAIYLKNSCLCKNITP-LEFTIEMNPESVSKEKLDSAWKNGITRL 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           SLG+QSL E +LR + R+ N   AI+A+   ++ +   +S D I  LP Q+  ++ + L+
Sbjct: 120 SLGIQSLNENALRAVERHCNVETAISALETVKSCWKGELSLDAIAGLPCQSEKEFLLSLE 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +SY   H+SLY LT+E+ T   +    G +     + A   +   + +   +G   YE
Sbjct: 180 KIISYNPGHISLYTLTVEEKTPLARNISSGKINF-DFDEADSQWLSGRDLLLKNGFFQYE 238

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVG---SHRVAISIEKHPESWLKMVR 309
           +SN    G +S+HN +YW   DY+GIG  A                +I ++   W K   
Sbjct: 239 VSNFCQNGKKSIHNSSYWAQKDYVGIGCSACGTFYGNKSFRWTNTENILEYENFWSKPFP 298

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM--LAGRNLDIECERNLQ--RQ 365
                    E  S E +  EFLMMGLR  EG++   +          + + E+ L+  R+
Sbjct: 299 LESEIPRSIEEFSLETREFEFLMMGLRTFEGLNSARYRKNFRFVEPWNGDLEKRLEPVRE 358

Query: 366 GFIERVQF----SRLRCTQRGMTMLDSVIANL 393
             ++  +          T+  +  L+ ++  L
Sbjct: 359 FGVKTTENPDGSKNFSLTEDAILFLNKILLEL 390


>gi|313683117|ref|YP_004060855.1| oxygen-independent coproporphyrinogen iii oxidase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155977|gb|ADR34655.1| oxygen-independent coproporphyrinogen III oxidase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 455

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/389 (20%), Positives = 146/389 (37%), Gaps = 29/389 (7%)

Query: 6   AYENNMTGQ-GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           AY + +  Q  S  L +Y H PFC   C +C  N      +  +E +I     E+Q +  
Sbjct: 34  AYLSKLHSQDPSRELSLYFHLPFCKNACYFCGCNVVFTSKEDKKERYIDYLTRELQILST 93

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNF 122
            +   R +  + FGGGTP+  +   +  I+  I  ++   +   EI+ E +P  ++    
Sbjct: 94  HIDVNRPVIQLHFGGGTPTFFDADQLHRIITAIKSHFKNFAEGAEISCEIDPRHIDEAQM 153

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +    AG NR+S G+Q  +++    + R         A+ LAR      ++ DLIY LP 
Sbjct: 154 KVLSDAGFNRVSFGIQDFDDKVQVAVHRVQPYDITKTAMELARKYNMVSVNVDLIYGLPH 213

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q++  ++  L  A+S   D  +++        L   M K  +  LP     + +   T  
Sbjct: 214 QSLETFKKTLDLAISLDPDRFAVFNYAHVP-WLKKTMRKIDETTLPHPAEKLSIMRYTID 272

Query: 242 ITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKV 288
                G     + + +    E         LH  N+  Y      D IGIG  +      
Sbjct: 273 HMEERGYKMIGMDHFAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGIGLTSIG---- 327

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                     K  ES+   +            L+ + +  ++++M L     + +  +E 
Sbjct: 328 EGADYYAQNFKDMESYEAAIDAGKLPHERGVALNEDDRIRQYVIMELMSNFKLDISRFER 387

Query: 349 LAGRNL------DIECERNLQRQGFIERV 371
           L G          +E  +  +  G +   
Sbjct: 388 LYGVKFAEYFADAVEALKPFEADGLLTIT 416


>gi|170693608|ref|ZP_02884766.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
 gi|170141390|gb|EDT09560.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia
           graminis C4D1M]
          Length = 461

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 145/377 (38%), Gaps = 29/377 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           L +Y H PFC   C YC  N    + +     +++    E+          R +S +  G
Sbjct: 55  LSLYFHIPFCDTVCFYCGCNKIATKNRGRARPYLEQLKREIALQAACFDTRRPVSQLHLG 114

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGTP+ +    +A ++    +++T+  +   E +IE +P     +     RK G NR+SL
Sbjct: 115 GGTPTFMSNDELAELMSAAREHFTLLPDSEAEYSIEVDPREASPDTIAHLRKLGFNRLSL 174

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +    + + R        + +  AR+  F  +  DLIY LP QT++ +   L   
Sbjct: 175 GVQDFDPLVQQAINRIQPLDMTASVMQAARHVGFHSIGVDLIYGLPHQTVSSFSRTLDTM 234

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  A D LS++        LF    +     LPS    + +        +A G     + 
Sbjct: 235 IELAPDRLSVFAYAHMPK-LFKMQRQMDAAALPSPAARLAILQRVVERLTAAGYVYIGMD 293

Query: 255 NHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +    E        +LH  N+  Y      D IG G  +  +V     + A    K  
Sbjct: 294 HFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIGKVGDVYAQNA----KDL 348

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------D 355
            ++   +     A+     L+++ +    ++  L     +   ++E + G         +
Sbjct: 349 PAYGAAIDAGRLAITRGVRLTADDRLRRDIITQLMCNLELRFDEFEAMYGIRFADTFEPE 408

Query: 356 IECERNLQRQGFIERVQ 372
           +E  R  ++ G +    
Sbjct: 409 LERLRGFEQDGLVSVTD 425


>gi|254514099|ref|ZP_05126160.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
 gi|219676342|gb|EED32707.1| oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
          Length = 501

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 160/410 (39%), Gaps = 28/410 (6%)

Query: 4   LSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           L+ Y N    + S  ++L +YVH PFC   C YC  N  V R +    ++I     E+  
Sbjct: 75  LNRYRNWQARKDSHADALSLYVHLPFCHDICYYCGCNKVVTRKEGVAAHYINELTKELDM 134

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVE 118
             QL G  R ++ + +GGGTP+ +    +  ++  +A  + +      E +IE +P +V 
Sbjct: 135 QSQLVGKNRPVTQMHWGGGTPTYLNDGEVTELMHNLASRFRLLDKGYREYSIEIDPRTVS 194

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
                  +  G NRISLGVQ  +    + + R     +    +   R + F  +SFDLIY
Sbjct: 195 PATIALLKGVGFNRISLGVQDFDPAVQKAVNRIQPYRQVADLVSAVRAHGFRSLSFDLIY 254

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q        L++ +S   D ++ Y         F          LP     + L  
Sbjct: 255 GLPYQDHLSMAETLRKVISLRPDRIACYNYAHLPE-RFLPQRSIDRHSLPEPEEKLLLAQ 313

Query: 238 LTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRY-----GDYIGIGPGAHSR 285
           +  +     G     + ++       +    E+    N+  Y      D +G+G  + S+
Sbjct: 314 MISATLQDAGYRYIGMDHYVLPDDDLAKAQGETRLQRNFQGYSLQLADDLLGLGVSSISQ 373

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     + A    +    + +++      + +   ++ E +    ++M L     + + +
Sbjct: 374 MGDFYLQNA----RDLPQYYQLLDAGQLPITKGYLINREDKLRRRVIMSLICDLSLDIAE 429

Query: 346 WEMLAGRNLDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
            E   G +     ++ L       +  +  ++  RL+ T  G   L ++ 
Sbjct: 430 VEKEFGIDFLAHFKQALAELECAFEDRLITLENGRLQVTAAGRPFLRNLC 479


>gi|219850215|ref|YP_002464648.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
 gi|219544474|gb|ACL26212.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aggregans DSM 9485]
          Length = 457

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 87/412 (21%), Positives = 155/412 (37%), Gaps = 28/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL+A         ++ + VYVH PFC ++C YC  N+   +     ++++     E++ 
Sbjct: 37  DYLAALRE--VATTTDPISVYVHLPFCAERCAYCGCNATATKRTEVVDHYLDRLERELEL 94

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R +  + +GGGTP+ +       ++  +   +T+    E+ +E +P      
Sbjct: 95  VTATLGTGRQVVQLHWGGGTPNFLNEAQSRRLMKLLHTAFTIDPAAEVALEVDPRIGSRE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
               +R+ G NRIS GVQ +       +GR    S+    ++ AR+  F  ++ DL+Y L
Sbjct: 155 QIFLFRELGFNRISFGVQDIAHDVQVAIGRIQPLSQTQTVVYAARDAGFTSINIDLVYGL 214

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT T +   LQ  +    D ++ +           +   D    LP+      L+   
Sbjct: 215 PYQTPTSFATTLQAIIDLRPDRIACFSYAHLPQARPNQKRVDAR-QLPTGYEKFQLFRQA 273

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGDY-----IGIGPGAHSRVK 287
               +A G     + + +           E     N+  Y        IG G  A   + 
Sbjct: 274 IDTLTAVGYDWIGMDHFALADDELAIAARERRLQRNFMGYTVLPAPHQIGFGMSAIGDL- 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G +      + H   + + +      +     LS +       +M L     +      
Sbjct: 333 AGRY---AQNDAHLGHYQRAIDAGRLPITRGMRLSDDDLMRRKAIMHLMCNLEVPFDLKL 389

Query: 348 MLAGRNLD------IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G+ LD      IE        G IE V+  RLR T+RG   + ++   L
Sbjct: 390 PPTGQRLDDVFPAEIERIAAYADDGLIE-VEPHRLRVTERGRFFVRNLAMEL 440


>gi|261880419|ref|ZP_06006846.1| coproporphyrinogen dehydrogenase [Prevotella bergensis DSM 17361]
 gi|270332887|gb|EFA43673.1| coproporphyrinogen dehydrogenase [Prevotella bergensis DSM 17361]
          Length = 326

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 161/325 (49%), Gaps = 11/325 (3%)

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I +I+ GGGTPS +  +N+  +   I + + V  + E+T+E NP  + +  F       V
Sbjct: 10  IQTIYLGGGTPSQLSHENLLKLFTHIYEVYNVDRDAEVTMECNPDDISMGMFDDL---PV 66

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQS  +  L+FL R H ASEA  A  + R      +S DL++  P++T++ WE 
Sbjct: 67  NRVSMGVQSFSDSRLKFLHRRHTASEADRAFGMLREQGITNISIDLMFGFPEETLSDWES 126

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +++ AL  A +H+S Y L  E+GT  Y++ K G +   +E +++ +Y+      +  G  
Sbjct: 127 DIEHALKLAPEHISAYGLMYEEGTPLYQLLKQGKVGEINEELSLAMYDALIDRLTMAGYE 186

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN    G  S HN  YWR   YIG+G  AHS            I+ +    +K V 
Sbjct: 187 HYEISNFCKQGYRSEHNSGYWRGVPYIGLGAAAHSYDINTRSWNIADIKTYITETMKGV- 245

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  E E +    + ++ +   LR +EG+ +        R   ++  +   + G + 
Sbjct: 246 ----LPCEVEVIDDNTRYNDMVTTALRTKEGLDLNSLTPAY-RQFLMDNAKPYLKDGLLV 300

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
            +    L  T+ G+ + ++V+++L 
Sbjct: 301 -LDGHYLHLTRSGIMLSNTVMSDLL 324


>gi|332293013|ref|YP_004431622.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332171099|gb|AEE20354.1| oxygen-independent coproporphyrinogen III oxidase [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 453

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/402 (20%), Positives = 154/402 (38%), Gaps = 25/402 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            ++  + T QG   + +Y+H P+C   C +C  N  + +    +  +IQS L E+     
Sbjct: 40  ESFRESNTSQG---ISLYIHLPYCESMCTFCGCNKRITKNHDVEIPYIQSVLKELAMYVT 96

Query: 65  LTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L G + +   +  GGGTP+   P ++  ++DGI       S  E++ E +P++    + +
Sbjct: 97  LLGDKPVIKQLHLGGGTPTFFSPAHLERLMDGIFALTKKVSTFELSFEGHPNNTTKEHLE 156

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQ 182
                G  R+  GVQ       R + R        +A   AR   +  +  D+IY LP Q
Sbjct: 157 ALYNKGFTRVCYGVQDYNTTVQRAINRVQPYVHVQSATENARTTGYESVGHDIIYGLPFQ 216

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T       + + +S   D ++ Y                 D  LPS +     Y + +++
Sbjct: 217 TQDDVINTINKTISLEPDRIAFYSYAHVPWIKGNGQRGFKDGDLPSADQKRMQYEIGKTM 276

Query: 243 TSAHGLHAYEISNHSFL-----GAE---SLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
               G     + + +       GA+   ++H  N+  Y        IG+G  A S     
Sbjct: 277 LIKAGYVEIGMDHFALKTDALFGAQQAGTIHR-NFMGYNASKTQVMIGLGVSAIS----D 331

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           S        K+ E + +++      +     L+ E       ++ L      S  D +  
Sbjct: 332 SWYSFAQNVKNIEEYQQLIEDGILPIFRGHILTKEDLIIRQHILNLMCSFETSWDDNQGN 391

Query: 350 AGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                D+    + L+  G +E +   +L  T++G   + ++ 
Sbjct: 392 FAELPDVLIKLKELENDGLLE-IHARKLIVTEKGRPFVRNIC 432


>gi|254234647|ref|ZP_04927970.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa C3719]
 gi|126166578|gb|EAZ52089.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa C3719]
          Length = 460

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 159/412 (38%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +  + L +YVH PFC   C YC  N  + + +     ++   + E++
Sbjct: 38  FDQLHALRDS--RKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIE 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + R L+  + +  + FGGGTP+ + P  +  ++  +  +  +    + +  IE +P   
Sbjct: 96  IVSRHLSREQVVEQLHFGGGTPTFLSPGQLRELMSQLRSHLNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +   ++   D LS++           +   + D  LPS    +++ 
Sbjct: 216 YGLPKQTPDSFARTVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +A G     + + +    E            +   Y  +G  D +G+G  A S
Sbjct: 275 QRTTEQLAAAGYRYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A+      +S+ +    ++  L     ++ +
Sbjct: 335 QIGD----LYSQNSSDINDYQTSLDNGQLAIRRGLHCNSDDRVRRAVIQQLICHFELAFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           D E   G +                  G I R+    +  T  G  ++ S+ 
Sbjct: 391 DIETEFGIDFRSYFAELWPDLERFAADGLI-RLDAKGIDITSSGRLLVRSIC 441


>gi|149369968|ref|ZP_01889819.1| coproporphyrinogen III oxidase [unidentified eubacterium SCB49]
 gi|149356459|gb|EDM45015.1| coproporphyrinogen III oxidase [unidentified eubacterium SCB49]
          Length = 454

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 159/405 (39%), Gaps = 23/405 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           ++ YE++   + + ++ +Y+H PFC + C +C  N  + +    +  ++++ L E     
Sbjct: 40  INTYESD---KENTAISLYIHLPFCEQLCTFCGCNKRITKNHTVETPYLETVLKEWTLYT 96

Query: 64  QLTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            L   R I   +  GGGTP+   P+N+A +++GI K  T +    I+ E +P++    + 
Sbjct: 97  NLLNKRPIIRELHIGGGTPTFFSPENLAALINGIFKLATKADKASISFEGHPNNTSFEHL 156

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPK 181
           +  +  G NR+S GVQ   E   + + R             AR++    +  D+I+ LP 
Sbjct: 157 KVLKDLGFNRVSYGVQDYNETVQKAINRIQPFENVKRVTEQARDLGYNSVGHDIIFGLPF 216

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT       +++      D ++ Y                 D  LPS +   ++Y + + 
Sbjct: 217 QTKEHIINTIEKTKELKPDRIAFYSYAHVPWIKGNGQRGFKDTDLPSPDEKREMYEIGKE 276

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
                G     + + +           ++  + N+  Y D      IG+G  + S    G
Sbjct: 277 ALQKAGYIEIGMDHFALSTDSLYQSMKDNTMHRNFMGYSDLKTEIMIGLGVSSISDSWFG 336

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +     EK  E + K +  N  AV     L+ E       ++ L      S  + E  
Sbjct: 337 FAQN----EKKVEEYQKRINNNELAVYRGHILNKEDLIIRKHILNLMCTLQTSWTENETY 392

Query: 350 AGRNLDI-ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                ++    + ++    I +++   L   ++G   + +V    
Sbjct: 393 FKEMPEVLAQLKEMESDQLI-KIEKETLTILEKGRPFVRNVCMAF 436


>gi|260891127|ref|ZP_05902390.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
 gi|260859154|gb|EEX73654.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
          Length = 463

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 106/466 (22%), Positives = 186/466 (39%), Gaps = 104/466 (22%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC KKC YCDF + VR  K  +  ++   + E++   +        +I+FGGG
Sbjct: 11  AIYIHIPFCDKKCEYCDFCTFVRMEKEYR-KYVDYLIREIRMYPKF----KYDTIYFGGG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    I  I+D +      + N EIT+E NP+ + +   +  R+ G+NR+S+G+QS
Sbjct: 66  TPSLLPVGMIKEIMDEL----DWTGNAEITLELNPTDMTLEKLKEIREIGINRLSIGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +   L F+GR H++ +A+    +AR   F  ++ DL++ +P Q++   + +L       
Sbjct: 122 FQNHVLDFIGRQHSSDDAVNVYKMARKAGFNNITVDLMFGIPNQSIEDLQKDLNILKELK 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +++S+Y L  E+GT+F+   + G L    ++V   +Y +     + +G   YEISN + 
Sbjct: 182 PENVSIYSLIWEEGTVFWSKLQKGILSEIDQDVEAQMYEMIIEFFNENGYCHYEISNFAR 241

Query: 259 LGAESLHNLN-------------------------------------------------- 268
           +      N N                                                  
Sbjct: 242 IDENFEENRNINKNCNSEKRIDFQNFSEIKNNEATLKNEIFQNIESFEMIKERQKNGGRH 301

Query: 269 ---YWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV---------- 315
              YWR   +IG G  A +      H    +  K    + K +      +          
Sbjct: 302 NLKYWRNRKFIGAGMSAAAYYGENRHSNVRTFNK----YYKFLDNKELPIDENTIEIVDK 357

Query: 316 VEKEFLSS--------------EQQADEFLM-MGLRLREGISVKDWEMLAGRNLDIEC-- 358
           +E E LS               E +  E L+  GL  +  +   D      + ++     
Sbjct: 358 IESEKLSRMLGLRLIQEGIGYFEDKRVEKLIKNGLLEKFIVKKADLSEKKEQKIEKFIDT 417

Query: 359 -ERNLQ---------RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            E+ ++          +   E+    RLR T+RGM + + V     
Sbjct: 418 KEKEIKNKVKNNESFNEKMAEKTYEIRLRLTKRGMLLANDVFVEFI 463


>gi|15596743|ref|NP_250237.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAO1]
 gi|107100976|ref|ZP_01364894.1| hypothetical protein PaerPA_01002006 [Pseudomonas aeruginosa PACS2]
 gi|116049490|ref|YP_791707.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892498|ref|YP_002441365.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa LESB58]
 gi|254239894|ref|ZP_04933216.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa 2192]
 gi|313106551|ref|ZP_07792779.1| oxygen-independent coproporphyrinogen III [Pseudomonas aeruginosa
           39016]
 gi|12230916|sp|P77915|HEMN_PSEAE RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|9947505|gb|AAG04935.1|AE004582_13 oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa PAO1]
 gi|115584711|gb|ABJ10726.1| oxygen-independent coproporphyrinogen III [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126193272|gb|EAZ57335.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa 2192]
 gi|218772724|emb|CAW28509.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa LESB58]
 gi|310879281|gb|EFQ37875.1| oxygen-independent coproporphyrinogen III [Pseudomonas aeruginosa
           39016]
          Length = 460

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 159/412 (38%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +  + L +YVH PFC   C YC  N  + + +     ++   + E++
Sbjct: 38  FDQLHALRDS--RKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIE 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + R L+  + +  + FGGGTP+ + P  +  ++  +  +  +    + +  IE +P   
Sbjct: 96  IVSRHLSREQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +   ++   D LS++           +   + D  LPS    +++ 
Sbjct: 216 YGLPKQTPDSFARTVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +A G     + + +    E            +   Y  +G  D +G+G  A S
Sbjct: 275 QRTTEQLAAAGYRYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A+      +S+ +    ++  L     ++ +
Sbjct: 335 QIGD----LYSQNSSDINDYQTSLDNGQLAIRRGLHCNSDDRVRRAVIQQLICHFELAFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           D E   G +                  G I R+    +  T  G  ++ S+ 
Sbjct: 391 DIETEFGIDFRSYFAELWPDLERFAADGLI-RLDAKGIDITSSGRLLVRSIC 441


>gi|189499627|ref|YP_001959097.1| coproporphyrinogen III oxidase [Chlorobium phaeobacteroides BS1]
 gi|189495068|gb|ACE03616.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           phaeobacteroides BS1]
          Length = 473

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 159/395 (40%), Gaps = 23/395 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS 73
            +  + +Y+H P+C   C +C  N++  +  V +E ++++ L E Q       G  ++  
Sbjct: 48  DTTGVSMYIHIPYCENHCYFCGCNAYRTQDHVYEEPYLEALLKEWQMYLDVFPGTLNVKE 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+   P N+  +++G+ ++         + E NP S    + +     G  R+
Sbjct: 108 MHIGGGTPTFFSPDNLIKLINGLYEHVNRMDGYMFSFETNPRSTTTEHLEALYSVGFRRM 167

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  +      + R          + +AR I F  ++FDL+Y LPKQT+      + 
Sbjct: 168 SFGIQDFDPVVQEEINRLQPFELVKEKVDIARKIGFTSINFDLVYGLPKQTLATVTDTIS 227

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +    D ++ Y        ++    K  +  LP   V  +LY+    +  + G H   
Sbjct: 228 KVMELKPDRIAFYAYG-HNPHMYEGQRKFKEADLPVGAVKQELYDKGLEMLESIGYHEIG 286

Query: 253 ISNHSFLGAE--------SLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +  G          +LH  N+  Y +      + +G  + S     +       E+
Sbjct: 287 MDHFALEGDALYVAAKNGTLHR-NFMGYTENTTQMMLALGSSSIS----DTWYAFAQNER 341

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIEC 358
             E +++ V      +     L+ E       ++ L  ++  S  D ++     ++    
Sbjct: 342 FHEDYIREVNNGRFPLHRGHLLTDEDLVLRRHILNLMCKQETSWADPKLYCDELDVARYR 401

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             ++Q  G +E  +   +R T+ G+  L ++    
Sbjct: 402 LEDMQNDGIVELSENG-VRVTEAGIPFLRNICMAF 435


>gi|152985311|ref|YP_001349140.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PA7]
 gi|150960469|gb|ABR82494.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           aeruginosa PA7]
          Length = 460

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 159/412 (38%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +  + L +YVH PFC   C YC  N  + + +     ++   + E++
Sbjct: 38  FDQLHALRDS--RKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIE 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + R L+  + +  + FGGGTP+ + P  +  ++  +  +  +    + +  IE +P   
Sbjct: 96  IVSRHLSREQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +   L+   D LS++           +   + D  LPS    +++ 
Sbjct: 216 YGLPKQTPDSFARTVDEVLALQPDRLSVFNYAHLPERFMPQRRINAD-ELPSPGHKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +A G     + + +    E            +   Y  +G  D +G+G  A S
Sbjct: 275 QRTTEQLTAAGYRYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A+      +S+ +    ++  L     ++  
Sbjct: 335 QIGD----LYSQNSSDINDYQASLDNGQLAIRRGLHCNSDDRVRRAVIQQLICHFELAFA 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           D EM  G +                  G I R+    +  T  G  ++ S+ 
Sbjct: 391 DIEMEFGIDFRSYFAELWPDLERFAADGLI-RLDAKGIDITSSGRLLVRSIC 441


>gi|86750973|ref|YP_487469.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris HaA2]
 gi|86574001|gb|ABD08558.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris HaA2]
          Length = 449

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 148/396 (37%), Gaps = 27/396 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
              + +Y+H PFC + C YC  N  +        ++++S + E+  +   + G   +  +
Sbjct: 44  DEPISLYLHVPFCKQMCWYCGCNMKLASKYGPVADYVESLINEIDLVADAMPGTMPVRHL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP++IEP+++  I+  + + +    + E+ IE++P ++         + G  R S
Sbjct: 104 HFGGGTPTVIEPEDLGAIMTLLRERFEFVPDAELAIESDPRTLTDEMVAKIGELGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+   +     R++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQAAINRIQPPEMVAHAMSRFKAAGVERINFDLIYGLPYQTAEDLRSTVEQ 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D ++L+        +        D  LP  ++  +  +         G     I
Sbjct: 224 CVEMKPDRVALFGYAHVP-WVAKNQRMIPDDSLPQSDLRAEQADAAAEALVKGGYVRIGI 282

Query: 254 SNHSFLGAESLH--------NLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +    +SL         + N+  Y        IGIG  +  R   G  +        
Sbjct: 283 DHFALP-KDSLAIAAATGELHRNFQGYTSDAAQTLIGIGATSIGRTPSGYLQNISET--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-----LD 355
             +W + V      V     L+ +      ++  +     I +       G +      +
Sbjct: 339 -GAWARAVAAGQLPVARGHALTQQDNLRAHVIERIMCDGKIDLAAAGRAFGCSDDWYAPE 397

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
            +    LQR G +      +L  T  G+ +   V A
Sbjct: 398 QDALAELQRDGAV-ICDQGKLTLTPDGVRLSRVVAA 432


>gi|261416501|ref|YP_003250184.1| oxygen-independent coproporphyrinogen III oxidase [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261372957|gb|ACX75702.1| oxygen-independent coproporphyrinogen III oxidase [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302327291|gb|ADL26492.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 378

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 105/381 (27%), Positives = 173/381 (45%), Gaps = 13/381 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFF 76
            G+Y+H PFC K C YCDF       ++  E ++     E++              +++ 
Sbjct: 2   FGIYIHVPFCAKICDYCDFRVMPANARL-FEEYVGLLEREIRAFNDTHRGALSQARTLYL 60

Query: 77  GGGTPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS++    +  I   + +    V S  E+++E NP S    + Q     GV R SL
Sbjct: 61  GGGTPSILPGACLERIFAVLTECGVRVESLDEVSMEFNPESCTEESVQMALSCGVRRFSL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+  +  L  +GR H       A+ L  ++   ++S DL++ LP Q++  +  ++ R 
Sbjct: 121 GLQTFSQTLLDRIGRRHTVERGFEALRLLTSLPQTKVSADLMFDLPGQSVDSFLSDVDRL 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             + + HLS Y L + + TL       G+  +  E++   +Y     I    G   YE+S
Sbjct: 181 SDFPLGHLSFYGLNVGERTLLGGRVSRGEEKI-DESLYEPMYLGGVEILEKKGFSRYEVS 239

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH- 313
           N +  G ESLHN+NYW  G+YIG GPGAHS       R   + E +P  W   V      
Sbjct: 240 NFAKPGDESLHNMNYWNRGEYIGFGPGAHSYF---DGRRFCAPEMYP-RWRDYVNAGSPD 295

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
           A +  + L  +    E + + LR R G+ +       G ++  E      ++ F   +  
Sbjct: 296 ASLTYDDLDKDDVLTERVWLSLRQRSGLDLNALAAD-GISVSPEGYEPWVKKDF-AMLDS 353

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
             L+   RG   +DSV+ ++ 
Sbjct: 354 GVLKLVGRGWIFMDSVVTDVL 374


>gi|163753531|ref|ZP_02160655.1| O2-independent coproporphyrinogen III oxidase [Kordia algicida
           OT-1]
 gi|161327263|gb|EDP98588.1| O2-independent coproporphyrinogen III oxidase [Kordia algicida
           OT-1]
          Length = 444

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 156/408 (38%), Gaps = 21/408 (5%)

Query: 2   KYLSAYENNM-TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+  + + +      +  + +Y+H PFC   C +C  N  + +    ++ +I + L E  
Sbjct: 24  KWKESVQKSFKESNEAEGISLYLHLPFCESLCTFCGCNKRITKRHEVEKPYINALLKEWA 83

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
             R+L G R  I  I  GGGTP+   P+++  +++G+ ++ T++ N E + E +P++   
Sbjct: 84  LYRELFGARPKIKEIHLGGGTPTFFSPEHLRELIEGLLQSATLADNYEFSFEGHPNNTTE 143

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + Q     G  R+  GVQ   E   + + R            LAR I    +  D+I+ 
Sbjct: 144 AHLQTLYDVGFRRVCFGVQDYNETVQKAIHRIQPFENVKRVTELARKIGYTSVGHDIIFG 203

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT    +  +++    + D ++ Y                 D  LP+       YNL
Sbjct: 204 LPFQTTEHVKETIEKTKLLSPDRIAFYSYAHVPWIKGNGQRGFRDEDLPTATEKTAQYNL 263

Query: 239 TQSITSAHGLHAYEISNHSFLGA-------ESLHNLNYWRYG-----DYIGIGPGAHSRV 286
            + +          + + +           E   + N+  Y        IG+G  +    
Sbjct: 264 GKQLLREADYTDIGMDHFALPTDSLYTSMIEKRLHRNFMGYTAQKTQLMIGLGVSSIGDS 323

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK-D 345
             G  +      K+ E++  ++ +    + +   LS E       ++ L      S   +
Sbjct: 324 WYGFAQNV----KNIETYYHLIHEGMIPLSKGHLLSVEDLLIRKHILNLMCNFKTSWSTE 379

Query: 346 WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              +      +E     +R   I  ++ + +R T++G   + ++    
Sbjct: 380 TTQIPELANIVEKLAEFERDALI-IIENNTIRITKKGKPFVRNICMAF 426


>gi|86141762|ref|ZP_01060286.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Leeuwenhoekiella blandensis MED217]
 gi|85831325|gb|EAQ49781.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Leeuwenhoekiella blandensis MED217]
          Length = 453

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 68/395 (17%), Positives = 144/395 (36%), Gaps = 20/395 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +       + +Y+H PFC   C +C     + +    +  +I + L E+   R   G R 
Sbjct: 43  LESNKREGISLYIHLPFCESMCTFCGCTKRITKNHSVETPYIDAVLKELALYRSFVGERP 102

Query: 71  I-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +   +  GGGTP+     N+A +++GI K+   +   E++ E +P++  + + +     G
Sbjct: 103 VIQQVHLGGGTPTFFSEHNLARLINGIFKHADKAPQCEMSFEGHPNNTTLEHLETLASFG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
             R+  GVQ   E   + + R    +    A   AR      +  D+I+ LP Q +   +
Sbjct: 163 FKRVCYGVQDYNETVQKAINRIQPFAHVQRATDQARQAGYTSVGHDIIFGLPFQKLEHVK 222

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++ +    D ++ Y                 +  LP+     + Y + + + +  G 
Sbjct: 223 NTIEKTIQLFPDRIAFYSYAHVPWIKGNGQRGYDEANLPTAEEKREQYEVGKQLLAEAGY 282

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAIS 296
               + + +           E   + N+  Y        +G+G  A S     S      
Sbjct: 283 VEIGMDHFALPTDALFHAQQEERIHRNFMGYNASKTQVMLGLGVSAIS----DSWYSFAQ 338

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    +  ++  +   V     L+ E       ++ L      S +   +      ++
Sbjct: 339 NVKGINEYYHLLENDILPVFRGHILTEEDLKIRQHILNLMCHFKTSWETPALYFDELPEV 398

Query: 357 EC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               + L+  G +   +   LR T++G   + +V 
Sbjct: 399 LIKLKELEADGLL-IFEHKGLRVTEKGKPFVRNVC 432


>gi|323452628|gb|EGB08501.1| hypothetical protein AURANDRAFT_37383 [Aureococcus anophagefferens]
          Length = 418

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 112/401 (27%), Positives = 169/401 (42%), Gaps = 30/401 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +YVH PFC ++C YCDF   V              ++     EM        P  
Sbjct: 22  APPRSLYVHLPFCRRRCFYCDFPVVVAGEASATRDRATARYVDLLEHEMASWDARAAP-- 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + +++ GGGTPSL+EP +I  +LDG+     V+   E+TIE +P + +      Y  AGV
Sbjct: 80  LDAVYLGGGTPSLVEPAHIRRLLDGVRGAVGVAEGAEVTIECDPGTFDAEKLAAYVAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWE 188
            R+SLGVQS ++  L   GR H  ++A+AA+   R        S DLI  LP      W 
Sbjct: 140 TRVSLGVQSFDDGVLEAAGRAHRRADALAAVAAVRAADLPHGWSLDLISGLPGLDGGLWR 199

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG-------DLVLPSENVAVDLYNLTQS 241
             L  AL++   H+S Y L +E GT F + + D           LP E +A D+Y     
Sbjct: 200 DTLAEALAFEPPHVSSYDLQVEAGTAFGRWYDDDGAKPSPARPALPDEALAADMYRDASR 259

Query: 242 ITSAHGLHAYEISNHSFLGAES-LHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +    G   YEIS+++   A   +HN  YWR    ++ +G GA S    G          
Sbjct: 260 LLRGAGYWHYEISSYARTPARKAVHNALYWRPRASWLALGLGATSSAG-GDRFTRPRAMA 318

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             E+W+      G AV E +         + L+ GLR  +G+ +       G + +    
Sbjct: 319 DYEAWV----AGGAAVGESDESDGADWLLDELLTGLRTSDGVDLGRVRAEYGADAEAAVR 374

Query: 360 R--NLQRQGFIERVQFSRLRC-TQRGMTMLD----SVIANL 393
           R         +  ++   L      G    +    S+ A L
Sbjct: 375 RGAADAVAANLATLEGDALALADPDGFLFSNFALSSIFAAL 415


>gi|21673211|ref|NP_661276.1| coproporphyrinogen III oxidase [Chlorobium tepidum TLS]
 gi|21646293|gb|AAM71618.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobium
           tepidum TLS]
          Length = 476

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 79/393 (20%), Positives = 165/393 (41%), Gaps = 21/393 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           +  + +Y+H PFC   C +C  N+H       ++ +I + + E Q       G  ++  +
Sbjct: 53  TTGISMYIHIPFCENYCYFCGCNAHRTTDHSLEKPYIDALIKEWQMYLDVFPGKLNVKEL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ + P+N+  ++D + ++     +   + E NP S    + +     G  R+S
Sbjct: 113 HIGGGTPTFLSPENLIRLVDTLFRDVNKMDDYMFSFETNPRSTTKEHLEALYSVGFRRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       I +AR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 173 FGIQDFDPVVQAEINRPQSFELVKEKIDMAREIGFNSVNFDLVYGLPKQTLATVTDTIQK 232

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y           +     +  LP  +V  +LY+  +++  + G H   +
Sbjct: 233 VMELRPDRLAFYGYGHNPHLYEGQRRFKLE-DLPVGDVKQELYDQGRAMLESIGYHEVGM 291

Query: 254 SNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +  G    E++ N     N+  Y +      + +G  + S     +       E+  
Sbjct: 292 DHFAIEGDALYEAMKNGTLHRNFMGYTENTTQMMLALGASSIS----DTWYAFAQNERTD 347

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECER 360
           + +++ V K    ++    LS E       ++ L  R+  S +D ++     ++      
Sbjct: 348 DRYMEEVNKGRFPIMRGHLLSDEDLVLRRHILNLMCRQETSWEDPKLYTEELDIARYRLE 407

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +++  G +   + S ++ T+ G+  L +V    
Sbjct: 408 DMENDGIVVLGEKS-VKVTEIGVPFLRNVCMAF 439


>gi|121996829|ref|YP_001001616.1| oxygen-independent coproporphyrinogen III oxidase [Halorhodospira
           halophila SL1]
 gi|121588234|gb|ABM60814.1| oxygen-independent coproporphyrinogen III oxidase [Halorhodospira
           halophila SL1]
          Length = 464

 Score =  252 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 162/405 (40%), Gaps = 30/405 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
                N L VYVH PFC   C YC  N  V       + +++    E++   QL G  R 
Sbjct: 49  EADQPNPLSVYVHVPFCRNVCFYCACNKIVTANYSRAQEYLEHVFKEIELQAQLFGEHRR 108

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++  ++  ++  + + +T+    N E +IE +P  VE+ +     + 
Sbjct: 109 VEQLHLGGGTPNYLKIDDLGRLVSKLREQFTLDDTDNREFSIEIDPRDVELEDIGRLAEL 168

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQW 187
           G NR+S+GVQ   E+    + R  +A    + I    R+ F   + DLIY LPKQT+  +
Sbjct: 169 GFNRMSVGVQDFNEEVQHAVNRVQSAELCRSIIEEGRRHGFRSTNVDLIYGLPKQTVESF 228

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L   +    + L++Y        LF    +  +  LP     + ++  T    +  G
Sbjct: 229 EQTLDEVIELRPERLAIYNYAHLPH-LFKIQRQINEDELPGPEDKLTIFGRTIEKLTDAG 287

Query: 248 LHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
                + + +    E        +LH  N+  Y      D I +G  +  ++     +  
Sbjct: 288 YVFIGMDHFALPDDELAVAQKKGTLHR-NFQGYSTRAECDLIALGSTSIGKIGNTYSQNL 346

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               + PE + + +     AV     L+ +      +++ +     ++  D E   G + 
Sbjct: 347 ----RDPEEYQQRIANGDLAVFRGYELNQDDLLRREVIIEVMCHSRLNFADIEARHGIDF 402

Query: 355 DIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +      L+R       G +E +    L+   RG  ML  V    
Sbjct: 403 NEYFADALERLQPLVEDGLME-MDDRHLQILPRGRLMLRHVAMAF 446


>gi|88703566|ref|ZP_01101282.1| Oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
 gi|88702280|gb|EAQ99383.1| Oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
          Length = 476

 Score =  252 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 154/395 (38%), Gaps = 26/395 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIF 75
           + L +YVH PFC   C YC  N  V R +     ++     E++   Q+ G  R ++ + 
Sbjct: 65  DPLSLYVHLPFCHDICYYCGCNKVVTRKEGVAARYLAQLSKELEMQSQIVGKDRPVTQMH 124

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +GGGTP+ +    I  ++  +A  + +      E +IE +P +V        +  G NRI
Sbjct: 125 WGGGTPTYLNDGEITELMHSLASRFRLLDKGYREYSIEIDPRTVSSATIALLKGVGFNRI 184

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ  +E+  + + R    ++    +     + F  +SFDLIY LP Q        L+
Sbjct: 185 SLGVQDFDERVQKAVNRIQPYTQVAELVEATRAHGFRSLSFDLIYGLPYQDHVSMAETLR 244

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +S   D ++ Y         F          LP     + L  +  +     G     
Sbjct: 245 KVISLRPDRIACYNYAHLPE-RFLPQRSIDRHTLPEPEEKLLLAQMISATLQDAGYRYIG 303

Query: 253 ISNH-------SFLGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + ++       +    ES    N+  Y      D +G+G  + S++     + A    + 
Sbjct: 304 MDHYVLPDDELAKAQGESRLQRNFQGYSLQLADDLLGLGVSSISQIGDFYLQNA----RD 359

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
             ++ +M+      + +   +++E +    ++M L     + + + E   G +  +    
Sbjct: 360 LPAYYQMLEDGQLPITKGYRINNEDKLRRRVIMSLICDLSLDIAEVEREFGIDFRVHFHD 419

Query: 361 NLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
            L+      +  +       LR T  G   L ++ 
Sbjct: 420 ALEELNPAFEDRLMEFDAGMLRVTAAGRPFLRNLC 454


>gi|156331105|ref|XP_001619142.1| hypothetical protein NEMVEDRAFT_v1g152251 [Nematostella vectensis]
 gi|156201738|gb|EDO27042.1| predicted protein [Nematostella vectensis]
          Length = 264

 Score =  252 bits (645), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 98/264 (37%), Positives = 140/264 (53%), Gaps = 2/264 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC + C YCDF  H       ++  I   + E++  ++     +I +I+FGGG
Sbjct: 3   GIYIHIPFCKQACYYCDF--HFSTSLKKKDELISCLVKELEIRKEELTDETIETIYFGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL+    + L++D + KN+ VS N EIT+EANP  +  N      K  +NR+S+GVQS
Sbjct: 61  TPSLMSIDELQLLIDTVYKNYRVSKNPEITLEANPDDLSKNQIIKLSKTPINRLSIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+F+ R HNA EA   +  A + F  ++ DLIY +P  +  +W   LQ    + V
Sbjct: 121 FFEEDLQFMNRAHNAEEAKDCLSAAISSFDNITVDLIYGIPNMSNDRWRENLQTLFDFGV 180

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +H+S Y LT+E  T      K G      E  A   + +    T   G   YEISN    
Sbjct: 181 NHISSYALTVEPKTALDSFIKQGKYPDVDEKAARAHFEILVEETQKQGFVHYEISNFGKP 240

Query: 260 GAESLHNLNYWRYGDYIGIGPGAH 283
              S HN +YW+   YIGIGP AH
Sbjct: 241 NYFSKHNTSYWQGKKYIGIGPSAH 264


>gi|1515308|emb|CAA66617.1| oxygen-independent coproporphyrinogen III dehyrogenase [Pseudomonas
           aeruginosa PAO1]
          Length = 460

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 158/412 (38%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +  + L +YVH PFC   C YC  N  + + +     ++   + E++
Sbjct: 38  FDQLHALRDS--RKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIE 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + R L+  + +  + FGGGTP+ + P  +  ++  +  +  +    + +  IE +P   
Sbjct: 96  IVSRHLSRAQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +   ++   D LS++           +   + D  LPS    +++ 
Sbjct: 216 YGLPKQTPDSFARTVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +A G     + + +    E            +   Y  +G  D +G+G  A S
Sbjct: 275 QRTTEQLAAAGYRYIGMDHFALPDDELASAQEDGTLQRNFQGYTTHGHCDLVGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A+      +S+ +    ++  L     ++ +
Sbjct: 335 QIGD----LYSQNSSDINDYQTSLDNGQLAIRRGLHCNSDDRVRRAVIQQLICHFELAFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           D E   G +                  G I R     +  T  G  ++ S+ 
Sbjct: 391 DIETEFGIDFRSYFAELWPDLERFAADGLI-RPDAKGIDITSSGRLLVRSIC 441


>gi|258544507|ref|ZP_05704741.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
 gi|258520242|gb|EEV89101.1| oxygen-independent coproporphyrinogen III oxidase [Cardiobacterium
           hominis ATCC 15826]
          Length = 460

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 77/400 (19%), Positives = 146/400 (36%), Gaps = 29/400 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSI 71
              +  L +YVH PFC   C YC  N  + R     + ++     ++ +    +   R +
Sbjct: 46  NAAARDLSLYVHIPFCEHVCYYCGCNKIITRNHDQSDEYLDQLERDIARQAAHIDPSRRV 105

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRKA 128
             +  GGGTP+ +    +  +L  + +++         E +IE +P +V  ++ +  R+ 
Sbjct: 106 IQLHLGGGTPTFLNHTQLRRLLAMLHEHFPRFAADDTGEYSIEIDPRTVSPDDLRFLREL 165

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQW 187
           G NR+S GVQ  +    + + R          I  AR+     +S DLIY LP QT+  +
Sbjct: 166 GFNRVSFGVQDFDPAVQQAVNRIQGFEHVRDTIAAARDAGYHSISADLIYGLPLQTVRTF 225

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L++    A D L+++        +F    +     LP     + L   T    +  G
Sbjct: 226 SRTLEQIRELAPDRLAVFNYAHMPH-IFGAQKQINAADLPDAPTKLQLLQATIEQLTDGG 284

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +  G        E     N+  Y      + +G G  A S +     +   
Sbjct: 285 YEFIGLDHFALPGDSLVRHQREGTLYRNFQGYSTFSTCELLGFGISAISMLDGCYSQH-- 342

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             EK    + + +   G  V+    LS + +    ++  +     + +K        N  
Sbjct: 343 --EKARSRYYQALNNGGIPVLRGIELSRDDRIRHHVITEIMCNLHLDLKAVSTRWQINAA 400

Query: 356 IECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               R       L     I ++   RL     G  ++ ++
Sbjct: 401 DYFAREWQALQPLAADDLI-KIDGDRLEVRPLGRLLIRNI 439


>gi|257460981|ref|ZP_05626081.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           gracilis RM3268]
 gi|257441644|gb|EEV16787.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           gracilis RM3268]
          Length = 454

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 28/406 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL+  +N    + S  L +Y H PFC   C +C  N      +   + ++     EMQ +
Sbjct: 37  YLNELKNQ---KSSTPLSLYFHMPFCRSACYFCGCNVIYTGKRDKMDRYLDYIEREMQIL 93

Query: 63  RQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVN 120
             +  G R +  + FGGGTP+    + +A  +  I K +   SS  EI+ E +P  +   
Sbjct: 94  SGVVDGSRQVVQMHFGGGTPTYFSAEQLARHIKNIKKYFTNFSSEAEISCEIDPRFLNAE 153

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
                   G NRIS GVQ  +E+  + + R          I +AR      ++ DLIY L
Sbjct: 154 QLDVLVSNGFNRISYGVQDFDERVQKXIHRIQPFELTRDVIAMARERGIKSINMDLIYGL 213

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++  ++  L+ ALS   D  +++        +   M K  +  LP   V +++   T
Sbjct: 214 PYQSLASFKRTLELALSLDPDRFAIFNYAHVP-WIKKSMRKFDETTLPEPKVKLEILKFT 272

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRV 286
               SA+G     + ++S    E        SLH  N+  Y      D IGIG  +    
Sbjct: 273 HDFLSANGYEMIGMDHYSKPADELHAALKNGSLHR-NFQGYTTKGGADLIGIGLTSIG-- 329

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                R      K  +++   +            L+ E    + ++MGL     + ++  
Sbjct: 330 --EGARHYAQNFKDMDAYEAAIDAGRLPYCRGVLLNEEDLLRKEVIMGLMSNFCVDIEAI 387

Query: 347 EMLAGRNLDIECERNLQRQGFIE---RVQFSRLRCTQRGMTMLDSV 389
           E           + +L++   ++   +V   R+  T  G  ++ ++
Sbjct: 388 EEKFKIKFFEHFDVSLKQLEALKDFVQVSPHRISVTPTGTLLIRNI 433


>gi|6466832|gb|AAF13050.1|AF157642_2 putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfitobacterium dehalogenans]
          Length = 374

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 172/338 (50%), Gaps = 10/338 (2%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +RQ      +S++F GGGTP+ +  + +  +L  I  N+    + E T+EANP ++    
Sbjct: 8   LRQQKVQEGMSTLFIGGGTPTALNEEELDTLLSIINSNFKFKDSAEKTMEANPGTLTTEK 67

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
            Q  RK G+NR+SLGVQSL +  LR +GR H   E   A+ L R   F  ++ DL++ LP
Sbjct: 68  LQTLRKQGINRVSLGVQSLNDDLLRQIGRIHRXEEVKDAVRLXREAGFKNLNLDLMFGLP 127

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q +  W   L+  L    +H+S+Y L +E+GT    ++K+    LP ++   +LY+LT+
Sbjct: 128 GQNLADWRDTLEETLRIRPEHISVYGLMVEEGTPIA-LNKELIANLPDDDTQAELYHLTR 186

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            I    G   YEISN++  G E  HNL  WR  +Y+GIGPGA S +K    +      + 
Sbjct: 187 EILGKAGYQHYEISNYALPGYECQHNLGXWRRMEYLGIGPGAVSCLKNRRXKNF----EX 242

Query: 301 PESWLKMVRKNGHAVV--EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
              + KM+ K    V   E E LS  +Q  E  ++GLRL++G ++   +   G +L    
Sbjct: 243 XXLYEKMLSKWELPVDSKENEXLSKREQMVEXXILGLRLKDGXNLPQXKNEYGADLXELY 302

Query: 359 ERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              L+R  +  + R++             L+ V  NL 
Sbjct: 303 PAVLERYLKAGVLRIEDGSXLXKPEYWLSLNGVCKNLC 340


>gi|187477889|ref|YP_785913.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella avium
           197N]
 gi|115422475|emb|CAJ49000.1| oxygen-independent coproporphyrinogen III oxidase [Bordetella avium
           197N]
          Length = 459

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 81/407 (19%), Positives = 158/407 (38%), Gaps = 29/407 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++ +A   +     + SL +YVH PFC   C YC  N  V R+      ++++   EM+ 
Sbjct: 42  QWQTALRAS---DPAESLSLYVHIPFCDSVCYYCACNKVVTRHHERATPYLEALRGEMRL 98

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             Q L   R+++ + FGGGTP+ +    +A ++  I  ++ ++   EI+IE +P +++  
Sbjct: 99  QTQGLGARRTVTQLHFGGGTPTFLSDAELAELMADIRHHFDLAPQAEISIEIDPRTIDAK 158

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G NR+S GVQ  +      + R          +  AR   F  ++ DLIY L
Sbjct: 159 RLFALAAMGFNRLSYGVQDFDPAVQEAVHRVQPYEAVRELMRSAREAGFRSINVDLIYGL 218

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+Q++  +   + +      D ++LY         F    +     +P     V L +  
Sbjct: 219 PRQSVASFSRTIAQVGELRPDRIALYAYAHLPA-RFKPQRRILAEEIPDPASRVALLSAA 277

Query: 240 QSITSAHGLHAYEISNHSFL--------GAESLHNLNYWRYG-----DYIGIGPGAHSRV 286
            S     G     + + +             SLH  N+  Y      D + +G  A S++
Sbjct: 278 ISGFMDMGYAYIGMDHFALPEDSLAQARRDGSLHR-NFQGYSTQPDRDLLALGVSAISQM 336

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 V     K  +++   +      V      + +      ++M +  R  + + + 
Sbjct: 337 GT----VYSQNHKDLDAYYAALGNGDFPVERGLQCTEDDLWRRAIIMDIMCRGRVDLGER 392

Query: 347 EMLAGR----NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               G       ++   R L+  G + ++    L  T+ G   + ++
Sbjct: 393 SAERGEADAFTEELPQLRQLEALGLL-KLDAGVLIVTEPGWFFVRAI 438


>gi|284929707|ref|YP_003422229.1| coproporphyrinogen III oxidase [cyanobacterium UCYN-A]
 gi|284810151|gb|ADB95848.1| coproporphyrinogen III oxidase, anaerobic [cyanobacterium UCYN-A]
          Length = 463

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 79/402 (19%), Positives = 158/402 (39%), Gaps = 30/402 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSI 71
            +    L +Y H PFC   C +C  N+ + + K    ++++  + +++   Q     R +
Sbjct: 51  NKKKTPLSLYCHIPFCESACYFCGCNTIITKNKKVASSYLEYIVNDIKKTSQFVSSDRLV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + I +GGGTP+ +    I  + + I  N+ +  N EI+IE NP  V+ N     R  G N
Sbjct: 111 NQIHWGGGTPNYLNQLQIEQLFNTIKNNFNIDKNAEISIEVNPKYVDKNLIFFLRNIGFN 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS G+Q  EE+    + R          +   +   F  ++ DLIY LP Q    +E  
Sbjct: 171 RISFGIQDFEEKVQNVINRVQPEEMLFQVMDWVKEANFESVNVDLIYGLPFQNRYTFEKT 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +Q+ +    D ++++           + +   D  LPS +  + +  +     + +    
Sbjct: 231 IQKTIELNPDRIAVFNFAYIPWIKPAQKNLPID-ELPSASEKLAILQMAIDKFNDNNYVY 289

Query: 251 YEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D I  G  + S +    H V +  
Sbjct: 290 IGMDHFAKPNDELSIAQEKGDLHR-NFQGYTTKPESDLISFGMTSISML----HDVYVQN 344

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--- 354
            K  + + + + +    + +   LS +      ++M L  +  +     +     N    
Sbjct: 345 HKKIKDYYRTIDEGLLPIEKGFALSQDDIIRRSIIMELMCQSQLDKNRVKSKYNLNFNFD 404

Query: 355 -----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                ++   + L++ G +      RL  T  G  ++ ++ +
Sbjct: 405 EYFAQELIDLQPLEKDGLVSLYD-DRLEVTSSGRWLIRNIAS 445


>gi|186684691|ref|YP_001867887.1| coproporphyrinogen III oxidase [Nostoc punctiforme PCC 73102]
 gi|186467143|gb|ACC82944.1| oxygen-independent coproporphyrinogen III oxidase [Nostoc
           punctiforme PCC 73102]
          Length = 460

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 157/400 (39%), Gaps = 26/400 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP- 68
             + Q    L +Y H PFC   C +C  N+ +   K   + +++S + +++    L  P 
Sbjct: 48  AASNQRQTPLSLYFHIPFCQSACYFCGCNTVISNNKNIAKPYVESLVQDIKNTAALIDPD 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  I +GGGTP+ ++   +  +   I + + +    EI+IE NP  ++ N     R+ 
Sbjct: 108 RKVLQIHWGGGTPNYLDHHQVEFLWKNINRYFNIDPQAEISIEINPRYIDKNYIFFLREI 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q    Q    + R          +   +   F  ++ DLIY LP QT   +
Sbjct: 168 GFNRISFGIQDFNSQVQVAVNRVQPEEMLFDVMSWVKEAKFESVNVDLIYGLPYQTRETF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  +++ +    D + ++           + +   +  LP+    +D+  +T    +++ 
Sbjct: 228 QETVKKTIELDPDRIVVFNFAYVPWLKPTQKNIPQEA-LPAAKEKLDILKMTIEELTSNQ 286

Query: 248 LHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +    E   +  N     N+  Y      +  G G  + S ++    +   
Sbjct: 287 YLFIGMDHFAKTNDELAIAQRNGTLKRNFQGYTTHAETELFGFGSTSISMLEDAYAQNH- 345

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              K  + + + +      + +   LS        ++MG+     +  +D E     N D
Sbjct: 346 ---KELKYYYQTIASGNLPISKGVKLSQNDIIRRDVIMGIMSHFQLHKQDIENKYQINFD 402

Query: 356 I------ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                  E  + L+  G +   +   ++ T  G  ++ ++
Sbjct: 403 EYFSEELEALKPLEADGLVSLSKNQ-IQITDIGRLLVRNI 441


>gi|323527062|ref|YP_004229215.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
 gi|323384064|gb|ADX56155.1| oxygen-independent coproporphyrinogen III oxidase [Burkholderia sp.
           CCGE1001]
          Length = 461

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/389 (21%), Positives = 152/389 (39%), Gaps = 31/389 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL A  +   G  +  L +Y H PFC   C YC  N    + +    ++++    EM   
Sbjct: 41  YLRAAAD--PGASATDLSLYFHIPFCDTVCFYCGCNKIATKNRAHARSYLERLKREMALQ 98

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEV 119
                  R +S +  GGGTP+ +    +A ++D   +++++      E +IE +P     
Sbjct: 99  ASCFDRRRPVSQLHLGGGTPTFMSNDELAELMDAAREHFSLLPDDEAEYSIEVDPREASP 158

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +     RK G NR+SLGVQ  +    R + R        + +  AR+  F  +  DLIY 
Sbjct: 159 DTIAHLRKLGFNRLSLGVQDFDPLVQRAINRIQPLDMTASVMQAARHAGFHSIGVDLIYG 218

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  +   L   +  A D LS++        LF    +     LPS  V + +   
Sbjct: 219 LPHQTVESFTRTLDTMIELAPDRLSVFAYAHMPQ-LFKMQRQMDAAALPSPAVRLAILQR 277

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
                +A G     + + +    E        +LH  N+  Y      D IG G  +  +
Sbjct: 278 VVERLTAAGYVYIGMDHFALPTDELARAQAQRTLHR-NFQGYSTRAECDLIGFGASSIGK 336

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V     + A ++  +       +     A+     LS++ +    ++  L     +   +
Sbjct: 337 VGDVYAQNAKALPAY----AAAIDAGRLAITRGVRLSADDRLRRDIITQLMCNLELRFDE 392

Query: 346 WEMLAGRNL------DIECERNLQRQGFI 368
           +E + G         ++E  R  ++ G +
Sbjct: 393 FEAMYGIRFADTFEPELERLRGFEQDGLV 421


>gi|110834203|ref|YP_693062.1| coproporphyrinogen III oxidase [Alcanivorax borkumensis SK2]
 gi|110647314|emb|CAL16790.1| coproporphyrinogen oxidase [Alcanivorax borkumensis SK2]
          Length = 457

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 160/400 (40%), Gaps = 28/400 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSI 71
                 L +Y+H PFC   C YC  N  +   K    ++++    E+Q     +   R +
Sbjct: 45  NAARRPLSLYIHIPFCGSVCYYCACNRIITANKARSADYLRLLKQEIQRKAVHVDSRRPV 104

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAG 129
           + + +GGGTP+ ++   +  ++  +A+++ +  +   +  IE +P +V+ +     R  G
Sbjct: 105 TQMHWGGGTPTFLDDGQLTELVYDLARHFNLRDDERSDYAIEIDPRTVDQSRLGLLRGLG 164

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ L+ +  + + R          +  +R+  F  ++ DLIY LP Q+ +   
Sbjct: 165 FNRVSLGVQDLDPRVQKAVNRVQPYELIRDTMEWSRDFGFRSINTDLIYGLPWQSESSLA 224

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++ L+   D +SLY         F    +  +  LP     +++      + +  G 
Sbjct: 225 RTLEQLLTLRPDRISLYNYAHLPE-RFKIQRQIQEHALPDPEEKLNMLTRAGKMLNEQGY 283

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
               + + +             L + N+  Y      D +G+G  A S++      +   
Sbjct: 284 RYIGMDHFALENDSLSIAQENGLLHRNFQGYTLHGDADLLGLGVSAISQIGN----LYAQ 339

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K  + W   +      + +   L+ + Q    L++ L     + +  +    G N   
Sbjct: 340 NHKALDDWQTSLEDRILPIEKGFMLNRDDQIRRALIIQLLCDLSVDMLQFGDTWGINFAD 399

Query: 357 ECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                L      + QG +  V+  RL  T+ G  +  +++
Sbjct: 400 YFVDALTEWLTFEAQGLVT-VENDRLFITETGRLVSRALV 438


>gi|83815617|ref|YP_444883.1| coproporphyrinogen III oxidase [Salinibacter ruber DSM 13855]
 gi|83757011|gb|ABC45124.1| oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber DSM 13855]
          Length = 460

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/411 (18%), Positives = 155/411 (37%), Gaps = 25/411 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + +      T      L +Y+H PFC + C YC  +  V         +++    E+  +
Sbjct: 36  FRAEVWRANTAAPEAPLSLYLHLPFCRQLCYYCGCHMKVTHDPARIAKYLRYLKREIDLL 95

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L+  R ++ + +GGGTP+L+ P+ I  + + +   + ++ + E++IEA+P  +  ++
Sbjct: 96  APMLSSDRPVTQVHWGGGTPTLLSPEQIRELGEHLRDRFRMAPDAEMSIEADPRGLTEDH 155

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
               R+ G+NR+SLGVQS +      + R         A+  AR+     ++ DL+Y LP
Sbjct: 156 IAAAREIGMNRLSLGVQSFDPTVQEAINRVQPERLTRTAVQWARDYGIESVNLDLVYGLP 215

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT       L   +  A D ++LY        L ++     + +              +
Sbjct: 216 HQTPDTMADTLGGVVDLAPDRIALYSYAHVPSVLEHQRLIPEEALPAPTERLRLFKQALE 275

Query: 241 SITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKV 288
            +T+  G     + + +    E   +  N     N+  Y      D    G         
Sbjct: 276 RLTTTAGYRFIGLDHFAKPDDELALAQDNGTLRRNFQGYSTRAGADVYAFGLSGI----H 331

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
               +     K+  ++   + ++   V      + E +    ++M L     +     E 
Sbjct: 332 QLSGLYAQNTKNLRTYYDQIDQDELTVYRGYRPTQEDRLRRHVIMQLMCNAEVQKGAVEA 391

Query: 349 LAGRNLDI------ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               + D       +  R L++ G +  ++   +     G  ++ +V A  
Sbjct: 392 RFNVDFDAHFSAALDRLRPLEQDGLVA-LRPDAITVRPPGRLLVRNVAAAF 441


>gi|226944101|ref|YP_002799174.1| coproporphyrinogen III oxidase [Azotobacter vinelandii DJ]
 gi|226719028|gb|ACO78199.1| oxygen-independent coproporphyrinogen III oxidase [Azotobacter
           vinelandii DJ]
          Length = 458

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 80/406 (19%), Positives = 160/406 (39%), Gaps = 35/406 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            K L+A   +   Q    L +Y+H PFC   C YC  N  + + +   + +++    E+ 
Sbjct: 38  FKLLNALRES--RQAKRPLSIYIHIPFCAHVCYYCACNKVITKDRGRAQPYLERLEKEID 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            + R L+  + +  +  GGGTP+ +    +  +++ + +++  +  V+ +IE +P   + 
Sbjct: 96  IVSRHLSPQQQVEQLHLGGGTPTFLSHGELQRLMEFLRQHFGFAEKVDCSIEIDPREADW 155

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +     R+ G NRISLGVQ L+    R + R  +  E  A I  AR + F  ++ DLIY 
Sbjct: 156 STMGLLRELGFNRISLGVQDLDPGVQRAVNRLQSLEETSAIIEAARTLEFRSINVDLIYG 215

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LPKQT   +   ++  ++   D LS++         F    +     LP+    + + + 
Sbjct: 216 LPKQTPETFTRTVEEIIALQPDRLSVFNYAHLPE-RFKPQRRISAADLPAPADKLTMLHN 274

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRV 286
           +    SA G     + + +    E            N+  Y      D IG+G  + S++
Sbjct: 275 SIEQLSAAGYQYIGMDHFALPDDELSIAQEDGRLQRNFQGYTTHGHCDLIGLGVSSISQI 334

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                 +    E   +++   +  +          +++ +     +  L     +     
Sbjct: 335 GD----LYSQNESDIDAYQSRLDNDQLPTARGLQCNTDDRIRRAAIQKLICDFQLDFASL 390

Query: 347 EMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTML 386
           E   G              +++ R G I          + +G+ +L
Sbjct: 391 EQRFGIVFRDYFADIWPQLQSMTRDGLI--------ALSPQGIEVL 428


>gi|325971236|ref|YP_004247427.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta sp.
           Buddy]
 gi|324026474|gb|ADY13233.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta sp.
           Buddy]
          Length = 387

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 113/395 (28%), Positives = 184/395 (46%), Gaps = 30/395 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSIS 72
               L +YVH PFC   C YC F S     K     +I  ++  ++   +   +     +
Sbjct: 6   SHGELSLYVHIPFCTTCCSYCAFYS---EPKEANSKYIDVYVDRLEQEILACASSVDRFT 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +IF GGG P  +    +  +L  +A    +S   E+TIE NP +   + F  + +  V R
Sbjct: 63  TIFVGGGNPGCLSASQLRRLL--VAAKAGLSD--EVTIEMNPETFSQDFFCLFSEGLVTR 118

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN----IFPRMSFDLIYALPKQTMTQWE 188
           +S+G+QS+++ +L  LGRN +  + + AI LA+         +SFDL+  LP QT     
Sbjct: 119 LSMGIQSMDDPTLARLGRNAHRKDNLRAIALAQKAHALYGIELSFDLMVCLPGQTTELAI 178

Query: 189 MELQRALSYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +LQ  LS++  DH+SLY LT+E+GT+  +    G L +  E+          +  +  G
Sbjct: 179 SDLQEILSFSEADHISLYCLTVEEGTVLAQQIGLGQLHVLDEDGQQAFLQTLWNELARLG 238

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              YE+SN      +S HN  YWR  +YIG+G  A S V  G+     S  +  + +   
Sbjct: 239 FTHYEVSNFCRNDKKSKHNQVYWRLDNYIGLGSSAASTVHEGTLSRHYSQIQDLKEYASS 298

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
              +G+   E+EF+ + QQ +E+LMM LR   GI  + +     ++ D            
Sbjct: 299 SLFSGY---EQEFVDANQQIEEYLMMALRTNAGIDKQTFNTRYSQDYDKLFGSA------ 349

Query: 368 IERVQFSRLR-------CTQRGMTMLDSVIANLAV 395
           I  +  +  R        T+ G  +LD ++  LA+
Sbjct: 350 ISTLDSAWYRNTKQLYVLTEVGFMVLDEILLRLAL 384


>gi|330808469|ref|YP_004352931.1| coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327376577|gb|AEA67927.1| Coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 460

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 155/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +    L +Y+H PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRDS--RKALRPLSLYLHIPFCANICYYCACNKVITKDRGRAHAYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + ++  +    + +  IE +P   
Sbjct: 96  LIGCHLDPTQRVEQLHFGGGTPTFLSHDELRQLMAKLRQHLNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+S+G+Q L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSIGLQDLDPAVQRAVNRLQSLEETRAVVEAARTLQFRSINIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +Q  +    D LS++         F    +     LP+    + + 
Sbjct: 216 YGLPKQTPENFARTVQEVIHLQPDRLSVFNYAHLPE-RFMPQRRINSQDLPTPEQKLAML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QGTIEQLTAAGYRYVGMDHFALPDDELAIAQEEATLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A       +++ +    ++  L     +   
Sbjct: 335 QIGD----LYCQNSSDLNHYQNTLADGQLATSRGLICNADDRLRRAVIQQLICHFHLPFA 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +            + +   G IE +  + +R    G  ++ SV 
Sbjct: 391 EIEQTFNIDFRGYFAPQWPQLQAMAADGLIE-LDDTHIRVLPAGRLLVRSVC 441


>gi|193213150|ref|YP_001999103.1| coproporphyrinogen III oxidase [Chlorobaculum parvum NCIB 8327]
 gi|193086627|gb|ACF11903.1| oxygen-independent coproporphyrinogen III oxidase [Chlorobaculum
           parvum NCIB 8327]
          Length = 476

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/393 (20%), Positives = 167/393 (42%), Gaps = 21/393 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           ++ + +Y+H PFC   C +C  N+H       ++ ++ + + E Q       G  ++  +
Sbjct: 53  TSGISMYIHIPFCENYCYFCGCNAHRTTDHSFEKPYVDALIKEWQMYLDVFPGKLNVKEL 112

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ + P+NI  +++ + K+     +   + E NP S    + +     G  R+S
Sbjct: 113 HIGGGTPTFLSPENIIRLVETLFKDVNKMDDYIFSFETNPRSTTREHLEALYSVGFRRMS 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R  +       I +AR I F  ++FDL+Y LPKQT+      +Q+
Sbjct: 173 FGIQDFDATVQEEINRPQSFELVKEKIDMAREIGFNSINFDLVYGLPKQTLATVTDTIQK 232

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        L+    +  +  LP  +V  +LY+  +++  + G H   +
Sbjct: 233 VMELRPDRLAFYGYG-HNPHLYEGQRRFKEEDLPVGDVKQELYDKGRAMLESIGYHEIGM 291

Query: 254 SNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +  G    E++ N     N+  Y +      I +G  + S     +       E+  
Sbjct: 292 DHFAIEGDALYEAMKNSTLHRNFMGYTENTTQMMIALGASSIS----DTWYAFAQNERTD 347

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECER 360
             +++ V K    ++    LS E       ++ L  R   S +D ++     ++      
Sbjct: 348 ARYVEEVNKGRFPIMRGHLLSDEDLVLRRHILNLMCRLETSWEDPKLYTDELDIARFRLE 407

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +++  G +E  + S ++ T+ G+  L +V    
Sbjct: 408 DMENDGIVELGEKS-VKVTEIGVPFLRNVCMAF 439


>gi|325108592|ref|YP_004269660.1| coproporphyrinogen III oxidase anaerobic [Planctomyces brasiliensis
           DSM 5305]
 gi|324968860|gb|ADY59638.1| coproporphyrinogen III oxidase, anaerobic [Planctomyces
           brasiliensis DSM 5305]
          Length = 440

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 184/405 (45%), Gaps = 24/405 (5%)

Query: 3   YLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+SA  + +  +      LG+Y H PFC K+C +C F  ++++     + ++Q+   E+Q
Sbjct: 33  YVSAAHDVLHREPDRSIPLGIYTHIPFCRKRCKFCYFKVYIQQNAKTIQRYVQAVDDELQ 92

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
            + +L     R I   +FGGGTPS +  + +  + D ++++ +  +  E+T E  P ++ 
Sbjct: 93  RVSKLPAIRDRRIEYAYFGGGTPSYLSSKQLLQLRDRLSQSVSWETAQEVTFECEPGTLN 152

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +  R+ G+ R+SLGV+S  ++ L+  GR H + E   A    ++  FP+++ DLI 
Sbjct: 153 QEKVKTLREIGITRVSLGVESFNDEILKENGRAHLSPEVEKAYGWIQDVGFPQVNIDLIA 212

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV--AVDL 235
            +  +T   W   + +A+ +A D+++LYQ+ +   T+  +  K+ +   P  +       
Sbjct: 213 GMIGETDDNWHRNIDKAIEFAPDNITLYQMELPFNTIISQEMKEKNAGAPVADWPTKRRW 272

Query: 236 YNLTQSITSAHGLH----AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
            N      S  G H       + N          NL  +R  D + +G  +   ++   +
Sbjct: 273 VNEAMERLSEAGYHIASGQEMVKNPETDRFIYRDNL--FRGHDLLPLGVSSFGHIQGIDY 330

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE-GISVKDWEMLA 350
           +     E     +L  V      +      + +Q+        L+++E G+     +   
Sbjct: 331 QN----EDDLNKYLDRVEAEEQPINRAYVPTEQQKLIRQF--ALQMKEGGVDTGALKEKF 384

Query: 351 GRNLDIECERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIAN 392
           G +   E    LQ Q   G++  V+  +++ T++G+  +DS++  
Sbjct: 385 GVDPLDEFSEALQNQSDAGYLT-VEGDQVKLTRKGLLQVDSLLPE 428


>gi|304312675|ref|YP_003812273.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
 gi|301798408|emb|CBL46633.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
          Length = 461

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 146/376 (38%), Gaps = 23/376 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A  +N+    +  L VY+H PFC   C YC  N  + +       ++     E+     
Sbjct: 43  AAARSNLA--PAKPLSVYIHIPFCKSLCYYCACNKIITQKTHRAVEYLDYLKREIALSAP 100

Query: 65  LTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNN 121
           L    R ++ +  GGGTP+ +  + ++ ++  +  ++ +    N E +IE +P +V++  
Sbjct: 101 LFDRSRKLTQLHLGGGTPTYLTGEQLSELMACLRNHFNLDESDNHEFSIEVDPRTVDIER 160

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+S GVQ  +E   R + R  +  +    I  AR+  +  +S DLIY LP
Sbjct: 161 IADLRQQGFNRLSFGVQDFDENVQRAVNRLQSEQQVYDLIAAARSAQYKSISVDLIYGLP 220

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+  ++  L + ++   D ++ Y        +           +P     ++L  LT 
Sbjct: 221 LQTVASFDATLSKIIALRPDRIATYSYAHLPQ-MVRAQRMIRKEDMPPPERKIELLELTI 279

Query: 241 SITSAHGLHAYEISNHSFLG-----AESLHNL--NYWRYG-----DYIGIGPGAHSRVKV 288
           +  +A G     + + +        A     L  N+  Y      D IG G  A   V  
Sbjct: 280 ARLTAAGYVYIGMDHFALPDDELVLARERGTLQRNFQGYSTHAQCDLIGYGNSAIGMVAD 339

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +      K    +  M+ +    +     LS + +    +++ L     I    +E 
Sbjct: 340 TYCQSV----KLLSEYYGMIDEGKLPIHRGYTLSDDDRIRRAVIVELMCHGRIEFARFEK 395

Query: 349 LAGRNLDIECERNLQR 364
               +        + +
Sbjct: 396 EFNIHFQTYFADAISK 411


>gi|152992050|ref|YP_001357771.1| coproporphyrinogen III oxidase [Sulfurovum sp. NBC37-1]
 gi|151423911|dbj|BAF71414.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurovum sp.
           NBC37-1]
          Length = 353

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 162/349 (46%), Gaps = 25/349 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H P+C  KC YC FNS+V ++    E ++Q+   ++  +  R  T   SI ++F GGG
Sbjct: 4   YIHIPYCDSKCHYCSFNSYVDKFDTRSE-YMQALYRQLSFELERFHTQKESIETLFIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS + P+    I D +     +  + EIT EANP+S   +  QG +  GVNRIS GVQS
Sbjct: 63  TPSTVSPELYEPIFDLLDPY--LQKDAEITTEANPNSASNSWLQGMKTLGVNRISFGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ L R H   +A   +  A+   F  +S DLIY     T      ++++A    
Sbjct: 121 FNTDKLKALNRAHTPKQAKKVVLAAKELGFEHISLDLIYNYQGDTKELLSDDIRQAFELP 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           VDH+S Y+LTIE GT F    +               + +   I    G   YEISN   
Sbjct: 181 VDHISAYELTIEDGTRFSSSPEVRQ------EDEKLAFFVANEI-KKRGFIQYEISNFG- 232

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +S HN  YW   +YIG G GA   +K   +     I+ + ++ L+         + +
Sbjct: 233 -TYQSRHNKGYWNLKNYIGAGAGAVGFLKDTRYYPQTDIDSYIQNPLQ---------ITE 282

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE-MLAGRNLDIECERNLQRQG 366
           E LS E+   E + +GLR   GI        +  R   +  E+ L+  G
Sbjct: 283 EHLSQEELLTEKIFLGLRSTIGIERSILTSEMKKRAELLYGEKKLEHDG 331


>gi|288941149|ref|YP_003443389.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
 gi|288896521|gb|ADC62357.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
          Length = 461

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/407 (18%), Positives = 153/407 (37%), Gaps = 30/407 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GP 68
             + +    L +Y H PFC   C YC  N    + +     +++    E++    L    
Sbjct: 45  ARSNESGRPLSLYFHIPFCDTVCFYCACNKIATKDRSLAPPYLERVYRELEMQSALFDKS 104

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYR 126
           R +  + +GGGTP+ +    +  ++D   +++T++ +   E +IE +P   + +  +  R
Sbjct: 105 RVVEQLHWGGGTPTFLSHDQMVELMDVTRRHFTLADDETGEFSIEIDPREADASTVKLLR 164

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMT 185
           + G NR+SLGVQ  +E+    + R    ++ +  +  A    F   S DLIY LP Q++ 
Sbjct: 165 RIGFNRMSLGVQDFDERVQAAVNRFQTEAQTMTVLEAALAEGFRSTSIDLIYGLPFQSVE 224

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L+R +      LS++         F    +  +  LP+  V +D+   T +  + 
Sbjct: 225 SFMKTLERVIEVNPQRLSVFNYAHLPE-RFKPQRRINEADLPAPQVKLDILQSTIARLTE 283

Query: 246 HGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
            G     + + +    E        +L+  N+  Y      D IGIG  +   +     +
Sbjct: 284 AGYVFIGMDHFARPDDELAVAQRAGTLYR-NFQGYSTHAHCDLIGIGVTSIGMIDNTYGQ 342

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 +    +   +      V     L+ +      ++  L     +         G 
Sbjct: 343 NR----RELNEYYADIDAGRLPVFRGLELNRDDLIRRDVITRLICHFQLDKAAVAAQWGI 398

Query: 353 NLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             D     +L      +  G +  V    +R   RG  ++ ++    
Sbjct: 399 VFDDYFADSLAKLKGMEEDGLVT-VDADSIRIQARGRLLVRNICMAF 444


>gi|325292990|ref|YP_004278854.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
 gi|325060843|gb|ADY64534.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           sp. H13-3]
          Length = 449

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 167/397 (42%), Gaps = 27/397 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIF 75
           N + +Y+H P+C + C +C  ++           ++++   E+  +  L  P ++ S++ 
Sbjct: 45  NRISLYLHIPYCDRLCWFCACHTKHTLKYEPIAVYLEALKREIAAVGSLVSPDAVVSAVH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+++ P+++  ++D + +++T     EI++E +P+ ++ + +      G+ R SL
Sbjct: 105 FGGGSPTMLRPEDMVGLMDCLKRHFTFGLAPEISVEMDPNDLDESRYDALAAIGMTRASL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +++  + + R     +  + +   R      ++ D++Y LP QT    +  + + 
Sbjct: 165 GVQDFDDKVQKTINRIQTFEQTESVVDAVRARGVHSVNCDILYGLPFQTCETLQQTVDQI 224

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   D ++L+        +        +  LP          +   +    G  A  I 
Sbjct: 225 ISLDPDRIALFGYAHVP-WMKKHQSLIPEQALPDIAERYRQMTMAAEMLGKAGYRAIGID 283

Query: 255 NHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +   A++L           N+  Y        IG+G  A  R+  G  +  ++     
Sbjct: 284 HFAKP-ADTLSRAVETGELRRNFQGYTTDTADALIGLGASAIGRLPQGYVQNMVAT---- 338

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-----NLDI 356
             + +MV + G AV++   LS E     +++  L     + + D +   G+     +++ 
Sbjct: 339 GEYQRMVGEGGFAVLKGIELSEEDHLRSYVIERLMCDFLLDLGDLKRRFGKASHSVSMEA 398

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +      R G + R+       T+ G   +  + A  
Sbjct: 399 QLFAGGDRDG-VVRMDGDVFAVTEAGKPFVRHIAATF 434


>gi|78188266|ref|YP_378604.1| coproporphyrinogen III oxidase [Chlorobium chlorochromatii CaD3]
 gi|78170465|gb|ABB27561.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Chlorobium
           chlorochromatii CaD3]
          Length = 475

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/394 (20%), Positives = 167/394 (42%), Gaps = 23/394 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    ++ ++ + L E Q       G  ++  +
Sbjct: 49  TTGVSMYIHIPYCENYCYFCGCNAHRTQDHSFEKPYLDALLKEWQMYLDVFPGTLNVKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+ + P+N+  ++DG+ K+     N   + E NP S    + +     G  R+S
Sbjct: 109 HIGGGTPTFLSPENLTRLVDGLFKHVNRMDNHMFSFETNPKSTTKEHLEALYNVGFRRMS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       I LAR I F  ++FDL+Y LPKQTM      +Q+
Sbjct: 169 FGIQDFDPIVQKEINRLQSFELVKEKIDLARQIGFTSINFDLVYGLPKQTMATITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++    K  +  LP  +   +LY    ++  + G H   +
Sbjct: 229 VMELRPDRLAFYAYG-HNPHMYEGQKKFNEADLPVGDAKQELYEKGSAMLESIGYHEIGM 287

Query: 254 SNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G      A++  LH  N+  Y +      + +G  + S     +       E+ 
Sbjct: 288 DHFAIEGDPLYIAAQNGTLHR-NFMGYTENTTQMMLALGSSSIS----DTWYAFAQNERT 342

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECE 359
              ++K V ++   +     L+ E       ++ L  ++  S +D ++     ++ +   
Sbjct: 343 DGEYIKAVNEDRFPLHRGHLLTDEDLVLRRHILNLMCKQTTSWEDPKLYTDELDVALVRL 402

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++Q  G +   + S +  T+ G+  L ++    
Sbjct: 403 EDMQNDGMVILGEKS-VTVTEVGIPFLRNICMAF 435


>gi|85710894|ref|ZP_01041955.1| coproporphyrinogen III oxidase [Idiomarina baltica OS145]
 gi|85695298|gb|EAQ33235.1| coproporphyrinogen III oxidase [Idiomarina baltica OS145]
          Length = 451

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 162/406 (39%), Gaps = 24/406 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A   N+  +    + +Y+H PFC   C YC  N  + R++   + ++ +  TE++  R 
Sbjct: 34  TATCQNVVAKYQKPISLYIHLPFCASLCYYCGCNKVITRHQYKADEYLDALGTELELYRS 93

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   + I+S+  GGGTP+ +    +  ++  I    +  +  E++IE +P   + +    
Sbjct: 94  VLAKKDIASVHLGGGTPTFLNTPQLRRLMALIKDVSSNQAIDELSIEVDPRQCDNDKLSV 153

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G NR+S G+Q  +      + R  +       ++ AR+  F  +SFDLIY LP QT
Sbjct: 154 LRALGFNRLSFGIQDFDNDVQVAIHRTQSYELVADQVNHARSLGFESISFDLIYGLPLQT 213

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             ++   L      + D +SL+         F    K  +  LP     + L+       
Sbjct: 214 EARFAHTLALVERLSPDRISLFNYAHLPE-RFAAQRKIKESWLPKAAQKLGLFKQAIEHL 272

Query: 244 SAHGLHAYEISNHSFLG-------AESLHNLNYWRY--GD---YIGIGPGAHSRVKVGSH 291
           +        + + +           E     N+  Y   D    +G+G  + S +     
Sbjct: 273 TGLDYQFIGMDHFAKPNDKLAIAQREGRLTRNFQGYVTKDQSAVLGLGVSSISHIDGH-- 330

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
                 EK  +S+   + KN   +V+    ++E +    L+  L     ++++ +     
Sbjct: 331 --YWQNEKDLKSYYNALIKNKLPIVKGYHSTTEDKIRGDLIKQLLCEFEVNLQQFSTRWS 388

Query: 352 RN-LDIECERNLQR-QGFIE----RVQFSRLRCTQRGMTMLDSVIA 391
            N         LQR Q FI+    ++    L  T  G  ++ ++ +
Sbjct: 389 LNSFSQHFHDELQRLQPFIDDELVKLSEEHLVITNPGKLLVRTIAS 434


>gi|157363704|ref|YP_001470471.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga lettingae TMO]
 gi|157314308|gb|ABV33407.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Thermotoga lettingae TMO]
          Length = 367

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/371 (29%), Positives = 169/371 (45%), Gaps = 26/371 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S+ +G+YVH PFC  +C YCDF S+     V  E++ +S L E+    Q  G  S++SI+
Sbjct: 4   SDYIGLYVHIPFCKDRCNYCDFVSYTDFSLV--EDYFESLLKEITIWSQYVGKVSLNSIY 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS I  + +    D I+K++ +  + EIT+E NP   +   F   R  GVNRIS+
Sbjct: 62  VGGGTPSDIPLKYLEKTFDTISKSFNL-CDPEITVEINP---KFRYFYELRNLGVNRISM 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+ ++  L+ + R H+ SE       A N F  ++ D I  LP ++       L+   
Sbjct: 118 GLQAADDTVLKAVNRRHSVSEFRETCREAMNYFENINIDFIIGLPFESEQTIWNNLKVIN 177

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            Y   H+S+Y L                     ++   D +    S    +G   YEISN
Sbjct: 178 EYNPKHVSVYILE-------------SKQEFLDQDTLADHHESFISALLENGYERYEISN 224

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            ++ G    HNL YW   DYIGIG  A   + +  +  + +I      +++ ++    A 
Sbjct: 225 FAYPGYRCKHNLKYWNNEDYIGIGVSAGGHIGLKRYVNSSNIL----LYMECLKNGKFAF 280

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              +  S   +  E L MGLRL  GI +     L+      E    L   G++   Q S 
Sbjct: 281 EYFKENSPLDELKETLFMGLRLSNGIKIDKLMQLSPELKIDELTSIL--NGYLIYDQES- 337

Query: 376 LRCTQRGMTML 386
           LR +  G    
Sbjct: 338 LRLSSTGKDFS 348


>gi|93007273|ref|YP_581710.1| coproporphyrinogen III oxidase [Psychrobacter cryohalolentis K5]
 gi|92394951|gb|ABE76226.1| oxygen-independent coproporphyrinogen III oxidase [Psychrobacter
           cryohalolentis K5]
          Length = 514

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 156/410 (38%), Gaps = 34/410 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             +    L +Y H PFC   C YC  N  + +      +++   + E++  R L  P   
Sbjct: 87  AREAHAPLSLYFHIPFCRHLCYYCACNKIITKKNSDAGDYLAYLIAEIKHKRGLLTPPED 146

Query: 71  -----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQ 123
                +  + FGGGTP+ ++   +  + + +   +        + +IE +P  +     +
Sbjct: 147 GKKPLVKQLHFGGGTPTFLQDNELIQLWEFLQTQFEFLPEDQGDYSIEIDPRELSSETLK 206

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NR+SLGVQ L+E     + R H+A      ++ AR   F  ++ DLIY LP Q
Sbjct: 207 VLRTLGFNRVSLGVQDLDETVQIAVNRVHSAELIENVLNEARELGFHSINVDLIYGLPHQ 266

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   ++  ++R +  + D LS++         F    +  +  LP+ +    +   T + 
Sbjct: 267 TPETFDKTIRRIIEMSPDRLSVFNYAHLPE-RFKAQRQIKEDDLPTPSDKFTMLGNTINT 325

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     I + +           E   + N+  Y      D +G G  + S++   +
Sbjct: 326 LTEAGYQYIGIDHFAKPDDELAVAQREGKLHRNFQGYTIMGDCDLLGFGVSSISQIANAN 385

Query: 291 HRVAISIEKHPESWLKMVRKNGH-----AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
               +      + +   +    +       V     S + +  E+++M L   + +  +D
Sbjct: 386 SSYILQNHTDLQVYKDNIDAARNNPTIMPAVNVIKTSIKDRLREYVIMNLLCHDYMDFRD 445

Query: 346 WEMLAGRNLDIECERNLQRQG------FIERVQFSRLRCTQRGMTMLDSV 389
                G +        +Q+ G       I+      +R   RG  +  +V
Sbjct: 446 INQKFGIDAITYFIHEIQQLGEMQEDRLIDMDAAG-IRVLPRGRLLGRNV 494


>gi|34558058|ref|NP_907873.1| coproporphyrinogen III oxidase [Wolinella succinogenes DSM 1740]
 gi|34483776|emb|CAE10773.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE [Wolinella
           succinogenes]
          Length = 455

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 154/405 (38%), Gaps = 28/405 (6%)

Query: 7   YENNMTGQ-GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           Y   +  +  + +L +Y+H PFC   C +C  N      +  +E +I     E+  +++ 
Sbjct: 35  YREALRREDPAKALSLYIHLPFCRSACYFCGCNVIYTSKEDKKERYIGYLKKELALLKEA 94

Query: 66  TG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQ 123
               R ++ + FGGGTP+ ++   +A ILD + + +   S + E++ E +P        Q
Sbjct: 95  MDTHREVTQLHFGGGTPTFMDASQLAEILDLLHETFPRFSDDAELSCEIDPRFFTQEQMQ 154

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQ 182
             ++ G+NR+S GVQ         + R  +      A+ +AR      ++FDLIY LP Q
Sbjct: 155 ALKRGGINRLSFGVQDFNPGVQEAIHRTQSVELVARAVEMARAHGINSINFDLIYGLPYQ 214

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               +   L+  +  + D L+++        +   M K  +  LPS    + +   T   
Sbjct: 215 DFESFAKTLEEVVKLSPDRLAVFNYAHVP-WMKKTMRKIDETTLPSPKEKLKILEHTIGF 273

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
               G     + + +    E            N+  Y        IGIG  +        
Sbjct: 274 LQNSGYETIGMDHFAKREDELFKAIEKGELRRNFQGYTTKGKSQTIGIGLTSIG----EG 329

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                   K  E++ + + +    + +   LS + +  + ++M L     ++        
Sbjct: 330 SDYYAQNHKEMEAYERALDEGHLPIHKGILLSEDDRLRKEVIMSLMSNFKLAFAPLNERY 389

Query: 351 GRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSV 389
           G +        L+        G +E  +   +  +  G  ++ ++
Sbjct: 390 GIDFKSYFAEALEELKEYEEAGLLELNEEG-IAVSPTGTMLIRNI 433


>gi|229591974|ref|YP_002874093.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25]
 gi|229363840|emb|CAY51294.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens SBW25]
          Length = 460

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 159/412 (38%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   + +  L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKAARPLSLYVHVPFCANICYYCACNKVITKDRGRALPYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  +++ + +++ +    + +  IE +P   
Sbjct: 96  LVACHLDPKQPVEQLHFGGGTPTFLSHDELRQVMNCLRQHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+S+G+Q L+ +  R + R  +  E  A I  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSIGLQDLDPEVQRAVNRLQSLEETRAVIDAARTLQFRSINVDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++           +   + D  LPS    + + 
Sbjct: 216 YGLPKQTPINFARTVEEVIKLQPDRLSVFNYAHLPERFMPQRRINTD-DLPSSAEKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +  G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QTTIEQLTQAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A       +++ +    ++  L     ++ +
Sbjct: 335 QIGD----LYCQNSSDLTGYQNTLAGAQLATSRGLVCTTDDRLRREVIQQLICNFSLAFE 390

Query: 345 DWEMLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +     E      + +   G IE +    +R    G  ++ SV 
Sbjct: 391 NIEQAFNIDFRGYFEEIWPQLQAMAEDGLIE-LDAQGIRVLPAGRLLVRSVC 441


>gi|195541932|gb|ACF98132.1| putative coproporphyrinogen III oxidase [uncultured bacterium 1062]
          Length = 449

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 163/409 (39%), Gaps = 26/409 (6%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + Y + +       +L +YVH PFC + C +C  ++           ++     EM+ + 
Sbjct: 32  ATYADWLQALPAETALSLYVHIPFCDRLCWFCGCHTKQVLRYDPIAAYLPGVFREMETVA 91

Query: 64  QLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +L G R  + ++  GGG+PS++ P +++ +   + + + V +++E +IE +P+ +  + +
Sbjct: 92  ELLGGRGHVVALHLGGGSPSMLRPDDLSDLSARVRRQFRVGADLEFSIEIDPNDMTDDRY 151

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
             +  AGV RIS+GVQ    +    + R     +  A +  +       ++ D++Y LP 
Sbjct: 152 DAFADAGVTRISVGVQDFNPKVQEAINRIQTFEQTKAVVDGMRLRGVKSVNLDVLYGLPH 211

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+   E  + +ALS   D ++L+        +        + VLP     +        
Sbjct: 212 QTVASVEATVDQALSMNPDRIALFGYAHVP-WMKTHQRMIDEAVLPGIAERLHQSTAASE 270

Query: 242 ITSAHGLHAYEISNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKV 288
              A G  A  I + +  G      A+S  LH  N+  Y        IG+G  +   +  
Sbjct: 271 RIRAAGYVAIGIDHFARPGDSLAVAAQSGTLHR-NFQGYTTDQAPALIGLGASSIGSLPQ 329

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G  +   +       +L+ VR+NG A+ +    + E +   +++  L     +SV + + 
Sbjct: 330 GYVQNITAT----GEYLQAVRENGLAIAKGLKFNDEDRMRGWVIERLMCDFEVSVDELQR 385

Query: 349 LAGRNLDIECER----NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                            L     +          T  G   + SV +  
Sbjct: 386 RFRECAGPVVTEMEYAALCDSDGVVSFDGRTFAVTPLGRPFVRSVASAF 434


>gi|77361664|ref|YP_341239.1| coproporphyrinogen III oxidase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876575|emb|CAI87797.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Pseudoalteromonas haloplanktis TAC125]
          Length = 457

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 165/402 (41%), Gaps = 32/402 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             LSA E++     S +L +Y+H PFC + C YC  N  + R++   + ++     E+  
Sbjct: 39  DLLSAIESS----NSRALSLYIHIPFCSQLCYYCGCNKIITRHQSKADTYLDFLAIEIAA 94

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L    ++  +  GGGTP+ +  Q ++ ++  +  ++  +   E  IE +P S+  N 
Sbjct: 95  QAPLFKDYTLEQLHLGGGTPTFLTTQQMSRLVKLLELHFNFTDATERGIEIDPRSLADNM 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
                  G NR+S G+Q   ++    + R  NA      I  AR   F  ++ D+IY LP
Sbjct: 155 LVDLSNLGFNRVSFGIQDFNDEVQLAVNRPQNADTVKQLITQARELGFKSINADMIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   ++  +++ L  + D +S++         F    K  D  LPS +  + ++  T 
Sbjct: 215 LQTPQSFKQTIEQLLELSPDRVSVFNYAHLPE-RFAAQRKIKDADLPSAHNKLTMFKNTL 273

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVK 287
              +  G     + + + +  E         LH  N+  Y      D +G+G  + S++ 
Sbjct: 274 EQMTQAGYQFIGMDHFAKVNNELAVAQNAGQLHR-NFQGYTTHGNCDLLGLGVSSISQIG 332

Query: 288 VGSHRVAISIEKHPESWLKMVR-KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                  +  +K  + +   V  ++G A+ +   LS++       +  L  +  + ++ +
Sbjct: 333 TA----ILQNQKELKHYYHSVETQSGCAITKGMHLSADDVIRADAIKQLICQFELDMEAF 388

Query: 347 EMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQRG 382
                 N +            L   G +  ++ + +  T RG
Sbjct: 389 SAKHALNFNHYFADALTAIEPLIADGMVT-IENNMISVTARG 429


>gi|254445107|ref|ZP_05058583.1| oxygen-independent coproporphyrinogen III oxidase [Verrucomicrobiae
           bacterium DG1235]
 gi|198259415|gb|EDY83723.1| oxygen-independent coproporphyrinogen III oxidase [Verrucomicrobiae
           bacterium DG1235]
          Length = 465

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/411 (18%), Positives = 162/411 (39%), Gaps = 31/411 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA   ++       L +YVH P+C   C +C     +       + ++     E++   +
Sbjct: 49  SALLADLE-DAEGPLSLYVHVPYCRSLCWFCGCAKIISTNTALADRYLDYLAIEVRRYAE 107

Query: 65  LTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L    R +  + FGGGTP+ + P  I  +   +  ++ +  + EI++E +P ++      
Sbjct: 108 LIRSGRKVVQLHFGGGTPNFLSPSQIKRMAGILRGSFEIDESAEISVELDPRTLSRAQVL 167

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQ 182
            +   GVNR S+GVQ +  +    + R          I   R      ++ DLIY LP Q
Sbjct: 168 AFTDLGVNRASIGVQDVNTKVQEAIHRIQPTETNEKTISWLREAGIGSINVDLIYGLPHQ 227

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   ++  L+  L+Y  + L+++       +   +   +    LPS +  +++   T   
Sbjct: 228 TEDGFKETLEEVLAYDPERLAVFSYAHVPWSKPAQKILERSP-LPSADSKIEILIQTVEK 286

Query: 243 TSAHGLHAYEISNHSF-----LGAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGS 290
            ++ G     + + +      + A+    L  N+  Y      D    G  A S+ +   
Sbjct: 287 LTSSGYTHVGMDHFAKHSDPMVKAQEAKTLQRNFQGYSLHANVDICAFGMSAISQSQNAF 346

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK------ 344
            +      K  +++ +M+ +    + +   L+ + Q    ++M L     +         
Sbjct: 347 RQNH----KDLDTYYRMLDEGNIPLEKGYLLTRDDQIRREVIMRLMCDLELDFDARGKAN 402

Query: 345 --DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             D+    G   ++E  R L++ G +     + L+ T  G  ++ +V +  
Sbjct: 403 GIDFSDYFGG--EVESLRALEQDGLVAFT-GTGLKVTPLGRLLIRNVASRF 450


>gi|281424410|ref|ZP_06255323.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella oris F0302]
 gi|281401679|gb|EFB32510.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella oris F0302]
          Length = 350

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/335 (29%), Positives = 161/335 (48%), Gaps = 9/335 (2%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNF 122
           Q     +I++I+ GGGTPS++    +  IL  I K W       E+TIE NP  V     
Sbjct: 17  QADTENTITTIYLGGGTPSMLSGNQLEQILLYIYKVWGKHIDLRELTIECNPDDVTEAFA 76

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
                  VNR+S+G Q+     LRFL R HN  E + A++  R++    +S DL++  P+
Sbjct: 77  ARLATLNVNRVSMGAQTFNNNRLRFLHRRHNREEIMQAVNRLRHVGIKNISIDLMFGFPE 136

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +TM +W+  LQ A+   V+H+S Y L  E+GT  + M +   +    E  ++ +Y +  +
Sbjct: 137 ETMEEWQTNLQEAIKLNVEHISAYSLMYEEGTPLFHMKQKKKIKDIDEETSLAMYEMLIN 196

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
             +  G   YEISN +  G  SLHN +YW    YIG+G  AHS      H        + 
Sbjct: 197 QLTKAGYEHYEISNFARPGYRSLHNSSYWHEVPYIGLGASAHSY----GHGTRKWNISNI 252

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           ++++  V  N     E E L+   Q ++ +   LR REGI + +++   G          
Sbjct: 253 KTYMDSVACNRLPY-EIEILNQNMQYNDLITTALRTREGIDLTNFKRKYGEEHLNYLLHE 311

Query: 362 LQRQGFIERVQFS--RLRCTQRGMTMLDSVIANLA 394
            +    +  ++ S   L  T++G+   D ++++L 
Sbjct: 312 AKPHLDLGNMELSKHHLSLTRKGLFTSDDIMSDLI 346


>gi|261868750|ref|YP_003256672.1| coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414082|gb|ACX83453.1| oxygen-independent coproporphyrinogen III oxidase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 455

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 160/403 (39%), Gaps = 23/403 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            +           L +YVH PFC K C +C  N  + R++   + ++     E+Q   +L
Sbjct: 38  DFTAAAQRYPERPLSLYVHIPFCHKLCYFCACNKLITRHQHKADIYLDFLEREIQVRSKL 97

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
              R  + + +GGGTP+ +     + ++  +  ++ ++ N EI+IE +P  +E++  +  
Sbjct: 98  FADRVTTQVHWGGGTPTYLTEAQSSRLMQMLRDHFNIADNAEISIEMDPREIELSMLEHL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           R  G NRIS+GVQ   ++  + + R  +     A +  AR   F   + DLIY LP QT+
Sbjct: 158 RHIGFNRISMGVQDFNKEVQKAVNREQDEDFVNALLVRARELGFQSTNLDLIYGLPFQTV 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   LQ+ +    D LS++       + F    K  D  LP     +++   T     
Sbjct: 218 DGFMFTLQKVIELNPDRLSVFNYAHLP-SRFAGQAKIKDWQLPKPEAKLEILQKTIETLG 276

Query: 245 AHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +    E        + + N+  Y      D +G+G  A S +     +
Sbjct: 277 NAGYKFIGMDHFAKPDDELAIAQQKGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                +K  +++   V  +G A+ +   ++ E      ++  L      +    E     
Sbjct: 337 N----QKDLKAYYTAVDMHGIALHKGLAMTKEDCLRRDVIKQLICNFKFAYAPIEQQYHI 392

Query: 353 NLDIEC-----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +                   +  +  +++  + +G  ++ ++ 
Sbjct: 393 HFKQYFAEDLALLAPLAADGLLDIGEAQITVSAKGRLLIRNIC 435


>gi|119510986|ref|ZP_01630107.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
 gi|119464331|gb|EAW45247.1| coproporphyrinogen III oxidase [Nodularia spumigena CCY9414]
          Length = 460

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 161/407 (39%), Gaps = 26/407 (6%)

Query: 4   LSAYENNMTGQG--SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++ + + +       + L +Y H PFC   C +C  N+ + + K   + +++  + E++ 
Sbjct: 40  VTDFHDAIAASNYRKSPLSLYFHIPFCESACYFCGCNTVISQNKNIAKPYLEHLVREIKN 99

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           M +L    R +  I +GGGTP+ +    +  +   I +N+ +    EI+IE NP+ V+  
Sbjct: 100 MARLIDSDRKVLQIHWGGGTPNYLNQDQVKFLWKHITENFNIDPQAEISIEINPAYVDQE 159

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R+ G NRIS G+Q    Q    + R          +   +   F  ++ DLIY L
Sbjct: 160 YIYFLREVGFNRISFGIQDFNPQVQLAVNRLQPEELLFDVMTWIKAAKFDSVNVDLIYGL 219

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  ++  + + ++   + + ++        +           LP     + +  +T
Sbjct: 220 PYQTLQTFQETVNKTIALDPNRIVVFNFAYVP-WMKPAQKNIPQAALPQPQEKLQILKMT 278

Query: 240 QSITSAHGLHAYEISNHSF-----LGAESLHNL--NYWRY-----GDYIGIGPGAHSRVK 287
               +++      + + +        A+  H L  N+  Y      + +G G  + S + 
Sbjct: 279 IEELTSNKYLFIGMDHFAKDNDELAIAQQNHTLQRNFQGYTTHAGTELLGFGATSISML- 337

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              H   +   K  + + + +  +   + +   LS +      ++M +     ++ +D  
Sbjct: 338 ---HDAYVQNHKPLKDYYQAIASDILPISKGIKLSQDDIIRRDVIMCIMSHFHLNKQDIA 394

Query: 348 MLAGRNLDIECERNLQRQGFIERVQF-----SRLRCTQRGMTMLDSV 389
                N D      L+    ++  +      + ++ T  G  ++ ++
Sbjct: 395 EKYHINFDEYFHHELKALAHLQADELVNISTNHIQITDIGRLLVRNI 441


>gi|146307636|ref|YP_001188101.1| coproporphyrinogen III oxidase [Pseudomonas mendocina ymp]
 gi|145575837|gb|ABP85369.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas mendocina
           ymp]
          Length = 460

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 159/412 (38%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +    L +YVH PFC   C YC  N  + + +     +++    E++
Sbjct: 38  FDLLHALRDS--RKARRPLSLYVHVPFCAHICYYCACNKVITKDRGRALPYLEKLEREIE 95

Query: 61  WMRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + +     + I  + FGGGTP+ +    +  ++  + +++ +    + + +IE +P   
Sbjct: 96  IVSRYVDKDQPIEQLHFGGGTPTFLSHDELRRLMLHLRQHFNLLDDDSGDYSIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+ +  R + R     E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPEVQRAVNRLQTLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT  ++   +   ++   D LSL+           +   + D  LPS    + + 
Sbjct: 216 YGLPKQTPERFARTVAEVIALQPDRLSLFNYAHLPERFMPQRRINND-DLPSPGDKLVML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             +    +  G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QASIEQLTRAGYRYIGMDHFALPDDELAVAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +    +    S+ + +     A       +++ +    ++  L     +   
Sbjct: 335 QIGD----LYSQNDSDITSYQQTLGNGQLATRRGLHCNADDRLRRAVIQQLICHFELRFS 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E   G N              L R G IE      +     G  ++ S+ 
Sbjct: 391 EIEQAHGVNFHEYFASLWPQLEQLHRDGLIELTAQG-IEVRPAGRLLVRSLC 441


>gi|209884183|ref|YP_002288040.1| oxygen-independent coproporphyrinogen III oxidase [Oligotropha
           carboxidovorans OM5]
 gi|209872379|gb|ACI92175.1| oxygen-independent coproporphyrinogen III oxidase [Oligotropha
           carboxidovorans OM5]
          Length = 450

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 80/411 (19%), Positives = 156/411 (37%), Gaps = 31/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L+A            + +Y+H PFC   C YC  N+ + R      +++ S   E+  
Sbjct: 37  EWLAAIPQ------GKPVSLYLHIPFCQSMCWYCGCNTTIVRRNEPVADYLTSLRREIDM 90

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   +    ++  + FGGGTP+++ P   A ++  + + ++   + EI IE +P  +   
Sbjct: 91  VTSHIKQKTTVGGVHFGGGTPTIMTPAQFAELMIFLRQKFSFLPDAEIAIEIDPRRLTRE 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
                  +GV R SLGVQS +    + + R  +  +  A    L       ++FDLIY L
Sbjct: 151 MLNELGASGVTRASLGVQSFDPVVQQAVNRIQSFEDTAAVTEGLRSAGIRSINFDLIYGL 210

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+      +Q+ L    D  S++       T      K  +  LP         N+ 
Sbjct: 211 PHQTVASCFDTVQKCLQLHPDRFSVFGYAHIP-TFKKHQRKIDETALPDGAGRHLQANMI 269

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
            S     G     + + +          A  + + N+  Y        IG G  A  R++
Sbjct: 270 ASRLINAGYQQIGLDHFALPDDSLATAQAAGILHRNFQGYTTDTSDILIGFGASAIGRLE 329

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +  ++    P ++ ++V        +   L+++ +    ++  +     + ++   
Sbjct: 330 QGYVQNEVA----PRAYCELVTNGDLPTRKGYALTADDRLRADIIERIMCDFRVDLEQVC 385

Query: 348 MLAGRNLDIEC-----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G   D           L   G + R++   L  T     ++ SV +  
Sbjct: 386 AKHGTTPDAALGSADRLEMLITDG-VVRLEGPVLSVTDDTRHLVRSVASAF 435


>gi|297272555|ref|XP_001093983.2| PREDICTED: radical S-adenosyl methionine domain-containing protein
           1, mitochondrial [Macaca mulatta]
          Length = 420

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 19/375 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN ++ R  V +    +  +TE Q + +L+G + + S+FFGGGTPSL 
Sbjct: 24  WPYCEKRCSYCNFNKYIPRG-VEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGTPSLA 82

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL+   
Sbjct: 83  SPHTVAAVLEAVAQTAHLPADSEVTLEANPTSTPGSRLAEFGAAGVNRLSIGLQSLDNTE 142

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  DHLS
Sbjct: 143 LRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCDDHLS 202

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           LYQL++E+GT  +   + G L  P   +A ++Y   +++    G   YE+SN +  GA S
Sbjct: 203 LYQLSLERGTALFAQVQQGVLPAPDPELAAEMYQRGRAVLREAGFRQYEVSNFARNGALS 262

Query: 264 LHNLNYWRYGDYIGIGPGAHSRV---KVGSHRVAISIEK-HPESWLKMVRKNGHAVVEKE 319
            HN  YW+ G Y+GIGPGAH R      GSH     I+   P++W+K V   GH   ++ 
Sbjct: 263 THNWTYWQCGQYLGIGPGAHGRFMPQGAGSHTREARIQTLEPDNWMKEVMMFGHGTRKRV 322

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQGFIER 370
            L   +  +E L +GLR   GI+ + W+            G N +++            +
Sbjct: 323 PLGRLELLEEVLALGLRTDVGITHQHWQQFEPQLTLCDVFGANKEVQELLEQGL----LQ 378

Query: 371 VQFSRLRCTQRGMTM 385
           +    LRC+  G+ +
Sbjct: 379 LDHRGLRCSWEGLAV 393


>gi|300778701|ref|ZP_07088559.1| possible coproporphyrinogen dehydrogenase [Chryseobacterium gleum
           ATCC 35910]
 gi|300504211|gb|EFK35351.1| possible coproporphyrinogen dehydrogenase [Chryseobacterium gleum
           ATCC 35910]
          Length = 452

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 154/397 (38%), Gaps = 24/397 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + +++ +  G+G   + +Y+H PFC   C +C  +  + +    +  +++S L E +   
Sbjct: 39  IRSFDESNAGEG---ISIYIHLPFCEALCTFCACHKRITKQHSVEVPYLESVLKEWKLYL 95

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            L   R  +  +  GGGTP+   P+N+  +L+GI     ++ + E + E +P++    + 
Sbjct: 96  DLFSERPKLKELHLGGGTPTFFSPENLRTLLEGIFSTVDIAEHPEFSFEGHPNNTTKEHL 155

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPK 181
           Q     G  R+S GVQ  + +  + + R             A+ I  R +S DL++ LP 
Sbjct: 156 QTLYDLGFRRVSFGVQDYDPKVQKAINRIQPFENVKNVTEWAKEIGYRGISHDLVFGLPH 215

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q     E  +++ +    D L+ Y                 +  LPS      LY   + 
Sbjct: 216 QNWEAMEYTIRKTMELKPDRLAFYSYAHVPWVKGVGQRGFDENDLPSGEEKRRLYEDGKK 275

Query: 242 ITSAHGLHAYEISNHSF--------LGAESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
           +    G     + + S         L  + LH  N+  Y        +G+G  A S    
Sbjct: 276 LLQDLGYIEVGMDHFSLEHDDLYQSLIHKKLHR-NFMGYTSSKTQLMVGLGMSAIS---- 330

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            S        K  E + KMV +    VV+   LS E       ++ L  +   +      
Sbjct: 331 DSWYAFAQNVKTVEEYQKMVEEGEIPVVKGHVLSDEDLTVRRHILNLMCQLETTFDINNS 390

Query: 349 LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
                  +E  + ++  G +E +  + ++ T+ G   
Sbjct: 391 FPELENALEMLKEMENDGLVE-INGTEVKITEAGRAF 426


>gi|310642448|ref|YP_003947206.1| coproporphyrinogen iii oxidase family protein [Paenibacillus
           polymyxa SC2]
 gi|309247398|gb|ADO56965.1| Coproporphyrinogen III oxidase family protein [Paenibacillus
           polymyxa SC2]
          Length = 475

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 163/377 (43%), Gaps = 13/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  +   + +   + ++ +   + +    + G R  S    GGGT
Sbjct: 85  LYMHIPFCAARCGFCNLFTLPDKRQDVHKEYVDALERQARQWAPIMGGRPFSRFAIGGGT 144

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+L+E   +  + D       +      I++E +P +V  +  +  ++ G +R+S+G+QS
Sbjct: 145 PTLLEAPLVERLFDIAENIMGLDPKRASISVETSPDTVTEDRLEVLKRRGTDRVSMGIQS 204

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E     + R         A+       FP ++ DLIY LP QT+  W   L+ ALSY+
Sbjct: 205 FVESESAAIYRPQKPKLVREALERLVEYNFPLLNVDLIYGLPGQTVETWLYSLEEALSYS 264

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              + LY L I + T+    +   D      ++ + LY + +      G   Y +   + 
Sbjct: 265 PGEIFLYPLYIRENTILKPGYTGLD-----HDIRLSLYEVARERLKQAGYVQYSMRRFAK 319

Query: 259 -LGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKNGHA 314
             G  S   L Y  +     G+G GA S  +   +  R  +S           V    H 
Sbjct: 320 NEGTSSKELLPYSCQEEGMAGLGCGARSYTRDVHYASRYGVSTAATRSIIADYVAAERHD 379

Query: 315 VVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-RNLQRQGFIERVQ 372
           + +  F L+++++   F++  L  REG+ +  +    G  L+ +    +L  +  +  V+
Sbjct: 380 LADYGFILNADERKRRFILKALLHREGLELCAYAERFGVCLEDDFTGMSLLLESGMAVVE 439

Query: 373 FSRLRCTQRGMTMLDSV 389
              LR T+ GM   D++
Sbjct: 440 EGTLRLTEEGMAYSDAI 456


>gi|154494178|ref|ZP_02033498.1| hypothetical protein PARMER_03525 [Parabacteroides merdae ATCC
           43184]
 gi|154086040|gb|EDN85085.1| hypothetical protein PARMER_03525 [Parabacteroides merdae ATCC
           43184]
          Length = 455

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 84/416 (20%), Positives = 151/416 (36%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y  A   +   Q   S+  Y H PFC + C YC  NS+        + ++ +   E+  
Sbjct: 33  DYADAIRES-NRQQPESVSFYFHIPFCQRLCHYCGCNSYAAPKPEIIDRYVAALHKEIDL 91

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  L    R +S I +GGGTP+ +    +  +   ++  + +  N E  IE +P  +   
Sbjct: 92  ILPLLDKKRKVSQIHYGGGTPTFLPALELKELNAHVSDTFELIENPEKAIECHPGWMTGQ 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +++    AG NR S+G+Q   +Q L+ + R     +    + + R+   R++ D +Y LP
Sbjct: 152 DWEKLATAGFNRFSIGIQDFNKQVLQTVHRQTPLLQPEEIVTILRSYGVRINMDFLYGLP 211

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +   +++A+S   D L  +         F +        LPS +    ++   +
Sbjct: 212 HQTEASFAETIEKAVSLKPDRLVTFSYAHVP-WAFPRQKVLEKTGLPSGDEKSRMFEAAR 270

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            I          + +      E         LH  N+  Y      G     G    S++
Sbjct: 271 KILCEADYQPIGLDHFVRKDDELYTALLNGQLHR-NFQGYCTRRTTGQVYAFGVTGISQL 329

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +      K    +++ V      V +   LS E+Q     +  L     I   + 
Sbjct: 330 GTAYAQNT----KDIMEYIEKVEAGILPVAKGYLLSREEQITREAIEMLMCNYRIDWNEL 385

Query: 347 EM---------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                            D  C R     G +E  +   +R T  G   + +V A+L
Sbjct: 386 SEQLSVPARSIKQATAYDEACLREFAEDGLVEFDENQ-IRMTPEGRLFVRNVAASL 440


>gi|223038811|ref|ZP_03609103.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           rectus RM3267]
 gi|222879784|gb|EEF14873.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           rectus RM3267]
          Length = 453

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 84/407 (20%), Positives = 157/407 (38%), Gaps = 28/407 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL   +N      S  + +Y+H PFC   C +C  N      +  +E +I     E++ 
Sbjct: 34  DYLRELKNR---DASRPISLYLHLPFCRSACYFCGCNVIYTSKEERKEKYIDYLEKELEI 90

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEV 119
           +   L     +  + FGGGTP+    + +  I+    AK    S   EI+ E +P  +  
Sbjct: 91  LSANLDTSAPVLQMHFGGGTPTFYSAEQLDKIIRLIKAKFKNFSLEAEISCEIDPRFLTR 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
              +     G NRIS GVQ  +E+  + + R         A+ +AR      ++ DLIY 
Sbjct: 151 EQLEALVSHGFNRISYGVQDFDERVQKEIHRIQPYEITKNAVDMARAKGINSINMDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  ++  L +AL+ + D L+++        +   M K  +  LPS    +++   
Sbjct: 211 LPYQTLESFKATLDKALTLSPDRLAVFNYAHVP-WIKKSMRKFDEATLPSPKTKLEILKY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T      +G     + + +  G E        +LH  N+  Y      D IGIG  +   
Sbjct: 270 TAEFFIKNGYKMIGMDHFAKPGDELFAALANGTLHR-NFQGYTTKGGADLIGIGLTSIG- 327

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                 R      K  + + K +        +  +L+ +    + ++M L     + +K 
Sbjct: 328 ---EGQRYYAQNFKDMDEYEKALDSGVLPYCKGIYLTGDDLIRKAVIMSLMSNFALDIKA 384

Query: 346 WEMLAGRNLDIECERNLQRQGFIER---VQFSRLRCTQRGMTMLDSV 389
            E           + +L     +     +   ++   + G  ++ ++
Sbjct: 385 VEAKFDIKFFEYFKDDLVELENLSEFVTITPEKISVNETGTLIIRNI 431


>gi|254428599|ref|ZP_05042306.1| oxygen-independent coproporphyrinogen III oxidase [Alcanivorax sp.
           DG881]
 gi|196194768|gb|EDX89727.1| oxygen-independent coproporphyrinogen III oxidase [Alcanivorax sp.
           DG881]
          Length = 457

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 158/398 (39%), Gaps = 28/398 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISS 73
               L +Y+H PFC   C YC  N  V   K     ++Q    E++    ++   R ++ 
Sbjct: 47  ARRPLSLYMHIPFCDSVCYYCACNRIVTANKARGAEYLQLLKREIKRKATRVDKRRPVTQ 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVN 131
           + +GGGTP+ ++   +  ++  +A+++ +  +   +  IE +P +V+ +     R  G N
Sbjct: 107 MHWGGGTPTFLDDGQLTELVYDLARHFNLRDDERSDYAIEIDPRTVDQSRLGLLRGLGFN 166

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ L+ +  + + R          +  +R+  F  ++ DLIY LP Q+ +     
Sbjct: 167 RVSLGVQDLDPRVQKAVNRVQPYELIRDTMAWSRDFGFRSINTDLIYGLPWQSESSLART 226

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+R L    D +SLY       + F    +  +  LP     + +      +    G   
Sbjct: 227 LERLLPLRPDRISLYNYAHLP-SRFKVQRQIQEQALPGPEEKLGMLTRAGKMLQEQGYRY 285

Query: 251 YEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +             L + N+  Y      D +G+G  A S++      +     
Sbjct: 286 IGMDHFALENDSLSVAQENGLLHRNFQGYTLHGDADLLGLGVSAISQLGN----LYAQNH 341

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K  + W   + +    + +   L+ + Q    L++ L     + +  +    G +     
Sbjct: 342 KTLDDWGHDLSQRRLPIEKGFILNRDDQIRRALIIQLLCDLSVDMSVFSETWGIHFPDYF 401

Query: 359 ERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     + +G +  V+  RL+ T  G  +  +++
Sbjct: 402 ADAMAEWVTFEARGLVA-VEKDRLQITDSGRLVSRALV 438


>gi|126664015|ref|ZP_01735009.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BAL38]
 gi|126623964|gb|EAZ94658.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BAL38]
          Length = 454

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 156/409 (38%), Gaps = 31/409 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L +++ +   +G   + +Y+H PFC   C +C  N  + +    ++ +I + + E +   
Sbjct: 40  LQSFKESNAAEG---ISLYIHLPFCESLCTFCGCNKRITKRHEVEDPYITAIIKEWKLYC 96

Query: 64  QLTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +L   + I   I  GGGTP+   P+N+  +++GI    T +   E + E +P++    + 
Sbjct: 97  ELFPTQPIIKEIHLGGGTPTFFSPENLERLINGIFDYATKAPEHEFSFEGHPNNTTKQHL 156

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G  R+S GVQ         + R             A+ I    +  DLI+ LP 
Sbjct: 157 QKLYNIGFRRVSFGVQDYSPHVQEAIHRVQPFHNVAKVTFWAKEIGYTSIGHDLIFGLPF 216

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q +   +  + +  S   D L+ Y                 D  LP ++   +LY   + 
Sbjct: 217 QNLHDVQDTIDKTKSLFPDRLAFYSYAHVPWIKGNGQRGFNDEDLPKDDEKRELYEEGKK 276

Query: 242 ITSAHGLHAYEISNHSFL--------GAESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
             + +G H   + + +            E LH  N+  Y        IG+G  + S    
Sbjct: 277 QLAKNGYHEIGMDHFALENDSMYTSFKEEKLHR-NFMGYTASKTQLMIGLGVSSIS---- 331

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK---- 344
            S       EK  E +   +  N   V +   L+SE       ++ L  +   S K    
Sbjct: 332 DSWYSFAQNEKTIEDYYARLADNQLPVFKGHLLTSEDLIIRKHILNLMCQFSTSWKDKSL 391

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           D+  L      +E  + ++  G +  +Q   +  T++G   + ++    
Sbjct: 392 DFSELTTV---LESLKEMEDDGLLT-IQNESITVTEKGKPFVRNICMAF 436


>gi|294506737|ref|YP_003570795.1| oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
 gi|294343065|emb|CBH23843.1| oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
          Length = 460

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 76/411 (18%), Positives = 154/411 (37%), Gaps = 25/411 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + +      T      L +Y+H PFC + C YC  +  V         +++    E+  +
Sbjct: 36  FRAEVWRANTAAPEAPLSLYLHLPFCRQLCYYCGCHMKVTHDPARIAKYLRYLKREIDLL 95

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L+  R ++ + +GGGTP+L+ P+ I  + + I   + ++ + E++IEA+P  +  ++
Sbjct: 96  APMLSSDRPVTQVHWGGGTPTLLSPEQIRELGEHIRDRFRMAPDAEMSIEADPRGLTEDH 155

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
               R+ G+NR+SLGVQS +      + R         A+  AR+     ++ DL+Y LP
Sbjct: 156 IAAAREIGMNRLSLGVQSFDPTVQEAINRVQPERLTRTAVQWARDHGIESVNLDLVYGLP 215

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT       L   +  A D ++LY        L ++     + +              +
Sbjct: 216 HQTPDTMADTLGGVVDLAPDRIALYSYAHVPSVLEHQRLIPEEALPAPTERLRLFKQALE 275

Query: 241 SITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKV 288
            +T+  G     + + +    E   +  N     N+  Y      D    G         
Sbjct: 276 RLTTTAGYRFIGLDHFAKPDDELALAQDNGTLRRNFQGYSTRAGADVYAFGLSGI----H 331

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
               +     K+  ++   + ++   V      + E +    ++M L     +     E 
Sbjct: 332 QLSGLYAQNTKNLRTYYDQIDQDELTVYRGYRPTQEDRLRRHVIMQLMCNAEVQKGAVEA 391

Query: 349 LAGRNLDI------ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               + D       +  R L++ G +  +    +     G  ++ +V A  
Sbjct: 392 QFNVDFDAHFSAALDRLRPLEQDGLVA-LGPDAITVRPPGRLLVRNVAAAF 441


>gi|70729294|ref|YP_259031.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf-5]
 gi|68343593|gb|AAY91199.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens Pf-5]
          Length = 460

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 155/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +    L +YVH PFC   C YC  N  + + +     ++Q    EMQ
Sbjct: 38  FDLLHALRDS--RKAQRPLSLYVHIPFCANICYYCACNKVITKDRSRALPYLQRLEQEMQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + K++ +    + +  IE +P   
Sbjct: 96  LIACHLAPNQRVEQLHFGGGTPTFLNHDELRQLMALLRKHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+S+G+Q L+    R + R  +  E  A I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSIGLQDLDPAVQRAVNRLQSLDETRAVIEAARTLQFRSINIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +S   D LS++         F    +     LP+    + + 
Sbjct: 216 YGLPKQTPENFARTVEEVISLQPDRLSVFNYAHLPE-RFMPQRRINGSELPAPAEKLQML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHS 284
             T    +A G     + + +           ES    N+  Y      D IG+G  A S
Sbjct: 275 QRTIEQLTAAGYRYIGMDHFALPDDELAIAQEESTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A       +++ +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLTHYQNALAGAQLATSRGLVCNADDRLRREVIQQLICNFSLKFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G IE    + +     G  ++ SV 
Sbjct: 391 EIEQAFNIDFRGYFNELWPELEEMADDGLIELGSEAIIVL-PAGRLLVRSVC 441


>gi|157737443|ref|YP_001490126.1| coproporphyrinogen III oxidase [Arcobacter butzleri RM4018]
 gi|157699297|gb|ABV67457.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri RM4018]
          Length = 357

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 174/341 (51%), Gaps = 22/341 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSISSIFFG 77
           +Y+H PFC  KC YC FNS+  ++ +  + ++++   +++   +       + I ++F G
Sbjct: 3   LYIHIPFCDSKCFYCAFNSYTDKFSLKND-YMKALKIQLKNNIEKYVKNRNKKIETVFIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS I+      I + I  N  +   VEIT EANP+S      +  +  GV+R+S GV
Sbjct: 62  GGTPSTIKAFEYKEIFEII--NPYLEEKVEITTEANPNSASFEWLETMKSLGVSRVSFGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + + L+FLGR+HN++ AI AI  A  I F  ++ D+IY +   T+   + +L  A S
Sbjct: 120 QSFQNEKLKFLGRSHNSNSAIKAIQNASEIGFKEINCDIIYGVKNDTLNSIKEDLDIAFS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + H+S Y LTIE+GT F+K+    D      +     Y +     S +G   YEISN 
Sbjct: 180 LPITHISAYSLTIEEGTKFFKL----DKNSVKIDDEDLSYEIF-DYFSKNGFTQYEISNF 234

Query: 257 SF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S    ++S HN  YW++ +Y+G+G GA   +         ++E++ ++ L +  +     
Sbjct: 235 SRNKNSQSKHNYGYWQHKEYLGVGAGAVGYINKRREYPLKNLEEYIKNPLFVEIEEIDED 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K          E +++G R   G+ ++ ++    + +D 
Sbjct: 295 DIK---------VEKVLLGFRCLNGVELELFDEKELKKIDE 326


>gi|316935163|ref|YP_004110145.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
 gi|315602877|gb|ADU45412.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopseudomonas
           palustris DX-1]
          Length = 449

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 76/396 (19%), Positives = 145/396 (36%), Gaps = 27/396 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
              + +Y+H PFC + C YC  N  +        ++++S + E+  +   L G   +  +
Sbjct: 44  DEPISLYLHVPFCKQMCWYCGCNMKLAAKYDPVADYVESLIDEINLVADALPGTMPVRHL 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP++I+PQ++  ++  + + +    + E+ IE++P ++         + G  R S
Sbjct: 104 HFGGGTPTVIDPQDLGAVMTLLRERFEFLPDAEVAIESDPRTLTAGMAAKIGELGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+   ++    R++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQEAINRIQPPEMVARAMQQFKSAGVERINFDLIYGLPYQTAEDLRRTVEQ 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D ++L+        +        D  LP   +     +         G     I
Sbjct: 224 CVEMRPDRVALFGYAHVP-WVAKNQRMIPDDSLPKPELRATQADAAAEALVKGGYVRIGI 282

Query: 254 SNHSFLGA--------ESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G           LH  N+  Y        IG+G  +  R   G  +        
Sbjct: 283 DHFALPGDTLAIAAKTGELHR-NFQGYTADAAQTLIGLGSTSIGRTPSGYVQNISET--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
             +W + V      V     L+ +      ++  +     + +       G   D     
Sbjct: 339 -GAWARAVAAGQLPVHRGHALTQQDNLRAHVIERIMCDGKVDLAAAGKAFGYAEDWYAPE 397

Query: 359 ---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                 LQR G +     S+L  T  G+ +   V +
Sbjct: 398 QDSLAELQRDGAVV-CNGSKLTLTPEGVRLSRVVAS 432


>gi|115374009|ref|ZP_01461299.1| coproporphyrinogen III oxidase, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|310825251|ref|YP_003957609.1| coproporphyrinogen III oxidase [Stigmatella aurantiaca DW4/3-1]
 gi|115369016|gb|EAU67961.1| coproporphyrinogen III oxidase, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398323|gb|ADO75782.1| Coproporphyrinogen III oxidase [Stigmatella aurantiaca DW4/3-1]
          Length = 427

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 104/398 (26%), Positives = 177/398 (44%), Gaps = 19/398 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQ- 64
           E          L +YVH P+CV++C YC + +       K   + ++QS  TE+Q   + 
Sbjct: 32  ETAQRLLDPKPLNIYVHTPYCVQRCAYCHYKTTTLNENRKAEIDRYVQSLCTEIQLASKR 91

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                R   SI+FGGGTP+L+  +N++ I+D + ++ T + + EIT+E  P ++      
Sbjct: 92  FHLKERPTHSIYFGGGTPTLLSKENLSRIMDCLREHLTFA-DPEITVEGEPVTLIQAKAD 150

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             +  GVNRISLG+QSL ++ +   GR      A  AI +A+     ++ DL+  L  +T
Sbjct: 151 HLKSLGVNRISLGIQSLADEIILKTGRRDTEKHAFKAIEIAKGTGAVVNVDLMSGLAGET 210

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W   ++RAL+  V  L++Y+  +   T +Y   K   L LPS++  +          
Sbjct: 211 DATWAYTVERALAADVHSLTVYKTELYANTEYYAGIKKNTLELPSDDEELKYAAYAIEQI 270

Query: 244 SAHGLHAYEISNHSFL---GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            A G     ++  +F    G    H  + WR  D    G  A   +   S +    +EK 
Sbjct: 271 EAKGYLP--VNFFTFTQGGGHMQRHTTSKWRGDDIYAFGVSAFGSIGSFSVQNISDLEK- 327

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE- 359
              +   +      +     L+++      +++G++L   +  K +    G +L   CE 
Sbjct: 328 ---YSSTLEAGELPIARGYHLNAKDLMARDVVLGMKLIH-LDRKAFRQRYGLDLVRLCEP 383

Query: 360 --RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
               L  +GFI  V   RL  T++G+   D     LA 
Sbjct: 384 MVNALVEEGFIT-VSDERLSLTRKGILWGDYTGRQLAA 420


>gi|319956016|ref|YP_004167279.1| oxygen-independent coproporphyrinogen iii oxidase [Nitratifractor
           salsuginis DSM 16511]
 gi|319418420|gb|ADV45530.1| oxygen-independent coproporphyrinogen III oxidase [Nitratifractor
           salsuginis DSM 16511]
          Length = 455

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 83/386 (21%), Positives = 149/386 (38%), Gaps = 24/386 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
           +  L +YVH PFC   C +C  N      +     ++     E++ +  Q+   R +   
Sbjct: 45  TGPLSLYVHLPFCRSACYFCGCNVVFTSKEEKLSEYVDYLKREIELLADQIDTSREVIQF 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            FGGGTP+  +   +  I+  I K++   S   EI++E +P     +  + ++  G NRI
Sbjct: 105 HFGGGTPTYYKAFELDEIMKHIKKHFPNWSEEAEISVEIDPRFFNEDQMKVFKSHGFNRI 164

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ  + +  + + R        AA+ LAR      ++ DLIY LP QT+  ++  L+
Sbjct: 165 SFGVQDFDPKVQQEIHRIQPYETTKAAVELARKYGIESINTDLIYGLPYQTLESFQNTLR 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A S   D L+++        L   M K  +  +PS  V + +   T    ++ G     
Sbjct: 225 LARSLDPDRLAVFNYAHVP-WLKKTMRKFDETTIPSPEVKLQILQYTIDYLTSEGYEMIG 283

Query: 253 ISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +    E         LH  N+  Y      + IGIG  +         R      K
Sbjct: 284 MDHFAKPEDELFGAIAKGELHR-NFQGYTTKGGANLIGIGLTSIG----EGQRYYAQNTK 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             +++   +            LS +    + ++M L     + +   E   G +      
Sbjct: 339 DMKAYEAAIDAGRLPYERGVELSDDDVLRKSVIMELMANFSVDIPRVEKEFGIDFADYFA 398

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTM 385
             L++    E  +   L  T   + +
Sbjct: 399 DALEK--LEEFEEADLLSITPEAIRV 422


>gi|312962434|ref|ZP_07776925.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens WH6]
 gi|311283361|gb|EFQ61951.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens WH6]
          Length = 460

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 155/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   + +  L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRDS--RKAARPLSLYVHVPFCANICYYCACNKVITKDRGRAHAYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LVACHLDPKQPVEQLHFGGGTPTFLSHDELRQVMTCLRQHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+S+G+Q L+ +  R + R  +  E  A I  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSVGLQDLDPEVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++           +   + D  LPS    + + 
Sbjct: 216 YGLPKQTPINFARTVEEVIKLQPDRLSVFNYAHLPERFMPQRRINTD-DLPSPAEKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +  G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QTTIEQLTQAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   +     A       +++ +    ++  L     ++ +
Sbjct: 335 QIGD----LYCQNSSDLNGYQNTLAGAQLATSRGLVCTTDDRLRREVIQQLICNFNLAFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +              +   G IE      +R    G  ++ SV 
Sbjct: 391 PIEQTFNIDFRGYFDDIWPQLEAMATDGLIELDAKG-IRVLPAGRLLVRSVC 441


>gi|317177968|dbj|BAJ55757.1| coproporphyrinogen III oxidase [Helicobacter pylori F16]
          Length = 345

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 164/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E ++Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYVQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYHNASLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +       N  + I        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTHFDNAIKEILEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +  +         IE  +   +          RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCTLGVELS-FLNENKVKFLIEENKAFIK--------NDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|193214601|ref|YP_001995800.1| coproporphyrinogen III oxidase [Chloroherpeton thalassium ATCC
           35110]
 gi|193088078|gb|ACF13353.1| oxygen-independent coproporphyrinogen III oxidase [Chloroherpeton
           thalassium ATCC 35110]
          Length = 468

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 141/375 (37%), Gaps = 22/375 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS 73
            S  + +YVH P+C  KC +C  NS +      +E ++ + L E       L  P  I  
Sbjct: 53  DSKGISLYVHIPYCDSKCYFCGCNSVITTNHDVEEPYVNALLAEWDMYCDMLPEPPKIKE 112

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+    +N   +LD I     ++   E + E NP +      Q +   G  R+
Sbjct: 113 IHIGGGTPTFFSIENHTRLLDRIFAKANIAEGTEFSFEGNPKNTSREQLQQFYDLGFRRM 172

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  +    + + R       +  + +AR I    ++ DL+Y LPKQT+   +  ++
Sbjct: 173 SFGIQDFDASVQKLINRVQPHEMVVDVMSIAREIGYNSINLDLVYGLPKQTLETVKGTVE 232

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  +   D L+ Y        ++ + ++     LP       LY + + +          
Sbjct: 233 KVKALRPDRLAFYAYG-HNPHMYPEQNRFKREDLPEGEEKQALYEIGKELLEESDYIEIG 291

Query: 253 ISNHSF--------LGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +            ++LH  N+  Y        + +G  + S     S    I  +K
Sbjct: 292 MDHFALNTDSLAIAARNKTLHR-NFMGYTTTSTQVMLALGASSIS----DSWYAFIQNDK 346

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE-MLAGRNLDIEC 358
           +P  ++  +      ++    L+ E       ++ +      S  D           +  
Sbjct: 347 NPNKYMDSINAGKLPIIRGHLLNEEDLILRRHILNVMCHFETSWADKSMQCEEMENVVRR 406

Query: 359 ERNLQRQGFIERVQF 373
            + L+  G +E  + 
Sbjct: 407 LKPLEDDGLVELSEN 421


>gi|307721469|ref|YP_003892609.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979562|gb|ADN09597.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurimonas
           autotrophica DSM 16294]
          Length = 456

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 154/410 (37%), Gaps = 32/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   E   T   S  L +Y H PFC   C +C  N      +     ++     E++ 
Sbjct: 35  EYVKKLE---TQDSSRPLSLYFHLPFCKNACYFCGCNVVFTSKEDKMIRYMDYLKRELKI 91

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEV 119
           + + L   R +  + FGGGTP+      +  I+  I   +     + EI+ E +P  +  
Sbjct: 92  LSKHLDMNREVIQMHFGGGTPTFFSAAQLDEIISEIKSYFPNFVPDAEISCEIDPRHINE 151

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +  +   + G NR+S G+Q   E+    + R    +    A+ LAR      ++ DLIY 
Sbjct: 152 DQMKVMSEHGFNRVSFGLQDFNEKVQIAVHRVQPYNITKDAMDLARKYNMHSVNVDLIYG 211

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  ++  L  AL+   D  +++        L   M K  +  LP  +  + +   
Sbjct: 212 LPFQTLDTFKETLSLALTLNPDRFAVFNYAHVP-WLKKTMRKIDETTLPRPDEKLQIMQY 270

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T    + +G     + + +    E         LH  N+  Y      D IG+G  +   
Sbjct: 271 TIDFLTENGYKMIGMDHFAKSEDELFKAIDKGELHR-NFQGYTTKGGADLIGVGLTSIG- 328

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                        K   S+ + +            LS + Q  + ++M L     + +K 
Sbjct: 329 ---EGVDYYAQNFKDMPSYEEAIDAGKLPFERGVALSEDDQIRQHVIMELMSNFKLDIKR 385

Query: 346 WEMLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +E + G       E      +    +  I  +    + C+Q G  ++ ++
Sbjct: 386 FEAIYGLEFKKYFEDAILDLKPFVEEELI-IMNDECIACSQTGTLLIRNI 434


>gi|218439556|ref|YP_002377885.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7424]
 gi|218172284|gb|ACK71017.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7424]
          Length = 469

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 73/399 (18%), Positives = 145/399 (36%), Gaps = 28/399 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTG-PRS 70
            Q  + L +Y H PFC   C +C  N  V + K    + ++      ++ +  L    R 
Sbjct: 57  NQAHSPLSLYFHIPFCQSACYFCGCNVIVTQQKERAVDPYLNYISKNIENIASLIDLDRR 116

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +    + ++   I +++   S+ EI+IE NP  V+ N     R  G 
Sbjct: 117 VGQLHWGGGTPNYLNQDQVEILWTKINQHFRFESDAEISIEINPRYVDRNYILFLRDLGF 176

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+Q    +    + R          +   R   F  ++ DLIY LP Q    ++ 
Sbjct: 177 NRISFGIQDFNPKVQETINRVQPEEMLFNVMEWMREAGFESVNVDLIYGLPYQNHYTFKE 236

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +Q+ +    D ++++        +        +  LP+    + +  +T          
Sbjct: 237 TIQKTIQLNPDRIAVFNFAYVP-WMKPVQKNLPENELPNAREKLAMLQMTIEELQEANYV 295

Query: 250 AYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              + + +           +   + N+  Y      +  G G  + S +    H V +  
Sbjct: 296 FIGMDHFAKPDDELAIAQRQGKLHRNFQGYTTKPESELFGFGLTSISML----HDVYVQN 351

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQ-QADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
            K  + + + +      +    +L          ++M L     +  +  E     N D 
Sbjct: 352 HKRLKDFYRSIEAGELPIERGVYLDRADNILRRKVIMELMCHFRLDKRLIEAKYNINFDN 411

Query: 357 E------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                    + L+  G IE     R+  T  G  ++ ++
Sbjct: 412 YFYQEELALKALENDGLIEEF-PDRIEVTPIGRLLIRNI 449


>gi|146338324|ref|YP_001203372.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. ORS278]
 gi|146191130|emb|CAL75135.1| Oxygen-independent coproporphyrinogen III oxidase (EC 1.3.99.22)
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Bradyrhizobium sp. ORS278]
          Length = 474

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 89/411 (21%), Positives = 160/411 (38%), Gaps = 31/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L A     T        +Y+H PFC   C YC  N+ V +       +  +   E+  
Sbjct: 61  EWLRAIPATATA------SLYLHVPFCRSMCWYCGCNTMVAKRDEPIAIYESALRCEIDM 114

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + RQ+  P  +  I FGGGTP+++ P++   ++  +  ++ V  + EI IE +P ++   
Sbjct: 115 VSRQIGRPLPVGHIHFGGGTPTIMAPESFVDLVGSLRHSFRVLPSAEIAIEIDPRTLTKA 174

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
                  +GVNR SLGVQS +      + R  +  +  AA + L R     ++FDLIY L
Sbjct: 175 MIDALAGSGVNRASLGVQSFDPLVQHAINRVQSFEQTAAATNGLRRAGVAGINFDLIYGL 234

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+      ++RA+    D LS++       +      K  D  LP      D     
Sbjct: 235 PHQTVASCLDTVRRAIDLRPDRLSVFGYAHVP-SFKTHQRKIRDDALPDSLERYDQACGI 293

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
                  G     + + +           E   + N+  Y        +G G  A  ++ 
Sbjct: 294 ADALKDAGYVQIGLDHFALPTDPMTNAFREGRLHRNFQGYTTDANDLLLGFGASAIGQLP 353

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  + A  +     ++ + +     A V+   L+ + +    ++  +    G+ +    
Sbjct: 354 QGYVQNAPQV----RAYEEKIAAGFLATVKGYGLTDDDRLRADIIERIMCDYGVDLDVIC 409

Query: 348 MLAGRNLD-----IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G   D         ++L   G +E +  S L  T+    ++ SV A  
Sbjct: 410 TRHGTETDEMLRSAPRLQSLISDGVVE-LNGSALAVTEHSRFLVRSVAAAF 459


>gi|78187433|ref|YP_375476.1| coproporphyrinogen III oxidase [Chlorobium luteolum DSM 273]
 gi|78167335|gb|ABB24433.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Chlorobium
           luteolum DSM 273]
          Length = 474

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 157/394 (39%), Gaps = 23/394 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSI 74
           +  + +Y+H P+C   C +C  N+H  +    +  ++ + L E Q       G  ++  +
Sbjct: 49  TTGISMYIHIPYCENYCYFCGCNAHRTQDHSFEGPYLDALLKEWQMYLDVFPGTLNVKEM 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+  ++DG+ K+         + E NP S    +       G  R+S
Sbjct: 109 HIGGGTPTFFSPENLTRLIDGLYKHVNRMDGYIFSFETNPRSTTKEHLLALYNVGFRRLS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +    + + R  +       + LAR I F  ++FDL+Y LPKQ +      +Q+
Sbjct: 169 FGIQDFDPIVQKEINRPQSFELVKEKVDLARQIGFTSVNFDLVYGLPKQNLGTITDTIQK 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+ Y        ++       +  LP  +   +LY+  +++  + G H   +
Sbjct: 229 VMQLRPDRLAFYAYG-HNPHMYEGQRNFKEEDLPVGDAKQELYDKGRAMLESIGYHEIGM 287

Query: 254 SNHSFL--------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +             +LH  N+  Y +      + +G  + S     +       E+ 
Sbjct: 288 DHFAIETDALYVASRNGTLHR-NFMGYTENTTQMMLALGSSSIS----DTWYAFAQNERT 342

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECE 359
             +++K V +    +     L+ E       ++ L  ++  S  D  +     ++     
Sbjct: 343 DGAYIKAVNEGRFPLHRGHMLTPEDLVLRRHILNLMCKQETSWADPALYTEELDVARYRL 402

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +++  G +   + S ++ T  G+  L ++    
Sbjct: 403 EDMENDGMVVLGENS-VKVTDAGIPYLRNICMAF 435


>gi|110004346|emb|CAK98684.1| hypothetical oxygen-independent coproporphyrinogen III oxidase
           oxidoreductase protein [Spiroplasma citri]
          Length = 359

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 182/382 (47%), Gaps = 34/382 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC   C YCDF    +   +  + ++ S   E+    Q     ++ +I+ GGG
Sbjct: 4   HLYVHIPFCDHICFYCDFFKIKKSRPIMIDEYLTSLEQEI---TQPHPNFALKTIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ ++   +  +L  + K     S +E TIE NP  +  +  Q  +K  +NR+S+GV++
Sbjct: 61  TPNSLDDIQLERLLQLLQKVVQ-GSIIEYTIELNPEKITKSQLQLLKKYHINRLSIGVET 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +Q L+ + R HN+++ +   +LA +  F  +SFDLIY L  QT    E +L       
Sbjct: 120 FNDQLLKKVNRYHNSADVVNNYYLARQEGFDNISFDLIYNLFDQTQVDIEADLLMIQKLQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y L +++ + + K      L LP  ++A D   +  +  +  G   YEISN++ 
Sbjct: 180 PDHISWYSLILKENSYWGK----TKLKLPEYDIAFD--EIINTALTKIGYERYEISNYTN 233

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              +S HNL YW    +  +GP A   +    + +  +  K+  +W +           K
Sbjct: 234 NKKKSRHNLAYWTNKSFWLLGPSAAGFINNDGYYLLQNSRKY-ANWTQT----------K 282

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEM------LAGRNLDIECERNLQRQGFIERVQ 372
             LS +    + LMMGLR+ +GI +   +            +D+E ++N           
Sbjct: 283 TELSLKDYYFQILMMGLRVLDGIDLVKVKDAKKAVNYYQSKIDVEVQKNNL------FFD 336

Query: 373 FSRLRCTQRGMTMLDSVIANLA 394
            + LRCT +G+ +L+ ++ N+ 
Sbjct: 337 NNHLRCTSQGLNILNDILVNIM 358


>gi|149918856|ref|ZP_01907342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
 gi|149820230|gb|EDM79647.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
          Length = 400

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 118/403 (29%), Positives = 184/403 (45%), Gaps = 29/403 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ----ENFIQSFLTEMQWMRQL---- 65
             + +LG+YVH PFC + CPYCDF+  V R    +       + ++L  ++  R      
Sbjct: 5   DPAEALGLYVHVPFCARACPYCDFDFEVLRQTESETGALAPRVSAWLEGLEAERDERWAG 64

Query: 66  -TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEANPSSVEVNNF 122
               R + +++ GGGTPS I    +  +   +   +   +++  E+T+E NP  ++    
Sbjct: 65  ELAGRRVDTLYLGGGTPSAIGVAGLERLFAWVESRFALRLAALDEVTVELNPEHLDAALL 124

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
                AGV+R+SLGVQSL    LR LGR H   +A+A +  A       S DL+     Q
Sbjct: 125 ARLVDAGVSRVSLGVQSLAASGLRELGRVHAREQALACVRRAHGAGLGTSADLMLGWRGQ 184

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T      E+   L     HLS+Y LTIE+ T +  +   G   LP ++V  +L  + +  
Sbjct: 185 TPAGLRREIDALLEAGAGHLSIYALTIEEDTPWPGLVARGQRELPDDDVQAELLQVAEGH 244

Query: 243 TSAHGLHAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGA----HSRVKVGSHRVAISI 297
            +A G   YE+++++   GAE++HN  YWR+ D + +GP A    H  V+          
Sbjct: 245 LAARGFRHYEVASYAAPGGAEAIHNGKYWRWRDVVALGPSAVSVRHGLVEGRGVVARRMN 304

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            +  E WL        A  E E L  E  A E L +GLR  EG+ V  +    G      
Sbjct: 305 PRGLERWLSG------AAPEYERLEGESAAAEGLWLGLRRLEGVDVAAFSRRFGLPRSWV 358

Query: 358 CERNLQRQGF--IERVQF---SRLRCTQRGM-TMLDSVIANLA 394
             R  ++ G   +E V     +RLR    G   + D++  +L 
Sbjct: 359 EARVARQVGLGNLEWVGDPPAARLRVAP-GRWLVHDTIAVDLL 400


>gi|152993668|ref|YP_001359389.1| coproporphyrinogen III oxidase [Sulfurovum sp. NBC37-1]
 gi|151425529|dbj|BAF73032.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurovum sp.
           NBC37-1]
          Length = 455

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 92/397 (23%), Positives = 158/397 (39%), Gaps = 32/397 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +KYL         +G++ L +Y+H PFC   C +C  N      +     +I+    E+ 
Sbjct: 38  LKYL--------DEGTDKLSLYIHLPFCRSACYFCGCNVVFTSKEEKLSQYIEYLKKEID 89

Query: 61  WMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVE 118
            + + L   R +    FGGGTP+  +   +  I+  + K     S + EI+ E +P    
Sbjct: 90  ILAEHLDTNRKVIQFHFGGGTPTFYKAFELDEIVTYVKKTFPNWSEDAEISCEIDPRFFN 149

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIY 177
               + ++K G NRIS GVQ  + +  + + R        AA+ LAR      ++ DLIY
Sbjct: 150 EEQMKVFQKHGFNRISFGVQDFDPKVQQEIHRIQPYEITKAAVDLARKYGINSINVDLIY 209

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT   ++  LQ A + + D L+++        +   M K  +  LP+ +V + ++ 
Sbjct: 210 GLPYQTFESFKKTLQEAFTLSPDRLAVFNYAHVP-WMKKTMRKFDETTLPAPDVKLQIFQ 268

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHS 284
            T     ++G     + + +    E         LH  N+  Y      + IGIG    +
Sbjct: 269 YTIDFFESNGYKMVGMDHFAKPEDELFSAIAKGELHR-NFQGYTTKGGANLIGIGL---T 324

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +  GSH  A    K  +++   +            LS +    + ++M L     I +K
Sbjct: 325 SIGEGSHYYA-QNTKDMKAYEAAIEAGKLPFERGVELSEDDYLRKAVIMELMANFSIDIK 383

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQR 381
             E   G N        L+     E V    +  T  
Sbjct: 384 RVEKEHGINFKEYFANALEE--LQEFVDADLITVTDE 418


>gi|88801174|ref|ZP_01116717.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
 gi|88776077|gb|EAR07309.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
          Length = 463

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/412 (18%), Positives = 155/412 (37%), Gaps = 29/412 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + A+ +N   + +  L +YVH PFC   C YC  N    + K   + ++ +   EM    
Sbjct: 43  VQAHLDNQRDK-TTPLSLYVHIPFCQHICFYCACNKIATKDKTRADAYLDTLEREMALHA 101

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS---NVEITIEANPSSVEVN 120
           +  G R ++ +  GGGTP+ +    ++ +LD ++  +       + E +IE +P     +
Sbjct: 102 RNFGHRKVTQLHLGGGTPTFLTLPQMSRMLDMLSIYFDWDPAQHDGEYSIELDPRETTDD 161

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
             +  R  G NR+S GVQ  + Q+   + R          + LAR   F  ++FDLI  L
Sbjct: 162 MLRLLRTRGFNRVSFGVQDFDPQTQIAINRVQPFELVKDKVDLARELGFSSVNFDLICGL 221

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q    +     + L+   D +SLY         F    +    ++P     +++   +
Sbjct: 222 PHQNTRSFSQTWDQTLTLEPDRISLYNYAHLPE-RFKPQRRIDSSIVPQAEEKLEIIRDS 280

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G     + + +  G        E     N+  Y      D + +G    S++ 
Sbjct: 281 IQRLQQSGYLYVGMDHFAKPGDELATALEEGTLQRNFQGYSTMSETDMLALGVSGISQID 340

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                + +      E +  ++ ++  AV    FL+ + +  ++++  L  +  +S     
Sbjct: 341 G----LYMQNHHELEPYEDLINQSQLAVKRGVFLNDDDRIRQWVIGQLACQGQLSFDALV 396

Query: 348 MLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                +        L R       G +   +   ++    G  +L  ++   
Sbjct: 397 QRFDIDAQQYFASELHRIDELAVDGLVSVSETG-IQVEPLGRLLLRPILLTF 447


>gi|329894326|ref|ZP_08270196.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
 gi|328923122|gb|EGG30445.1| Coproporphyrinogen III oxidase, oxygen-independent [gamma
           proteobacterium IMCC3088]
          Length = 465

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 84/403 (20%), Positives = 150/403 (37%), Gaps = 28/403 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGP 68
               Q    L +YVH PFC   C YC  N  V R     + ++ +   E+   R      
Sbjct: 49  AQADQRDLPLSLYVHVPFCRSICYYCACNKVVTRTPGAGQEYLNALDKELARYRDWGLNQ 108

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYR 126
           R ++ + +GGGTP+ +    +  ++  IA+N+ +  + + E +IE +P +V        R
Sbjct: 109 RLVTQLHWGGGTPTYLSDAELTQLMHLIARNYQLTDAPDREYSIEIDPRTVSKQTIALLR 168

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMT 185
             G NR+SLG+Q  +    + + R           H +  + F  +SFDLIY LP Q+  
Sbjct: 169 GLGFNRLSLGIQDFDPLVQKAINRVQPYEMVADLTHSIREHGFKSLSFDLIYGLPHQSEQ 228

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L + +    D ++ Y         F        L LPS    + L  L  +  + 
Sbjct: 229 SFSKTLAKVIRLGPDRIACYNYAHLPN-RFTSQRAIDRLTLPSATQRLRLQRLIDTTLAD 287

Query: 246 HGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRV 293
            G     + ++            E     N+  Y      D +GIG  A S++      +
Sbjct: 288 SGYVLIGLDHYVKTTDELSVAQREGRLLRNFQGYSLKSAEDMMGIGHSAISQIGD----M 343

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-- 351
            +   ++ + +L     N   +     L+ +      ++M +  +   S+ +     G  
Sbjct: 344 IVQNARNLDDYLAKTEANESPISRGLTLTQDDLLRRDIIMDICCKLEFSLSETCQRYGYQ 403

Query: 352 ----RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  +IE  +     G I        R T  G   L ++ 
Sbjct: 404 AQRYLKKEIEDLQEFIADGLINETDSGY-RLTTLGRHFLRNLC 445


>gi|313205860|ref|YP_004045037.1| oxygen-independent coproporphyrinogen iii oxidase [Riemerella
           anatipestifer DSM 15868]
 gi|312445176|gb|ADQ81531.1| oxygen-independent coproporphyrinogen III oxidase [Riemerella
           anatipestifer DSM 15868]
 gi|315022745|gb|EFT35769.1| coproporphyrinogen III oxidase [Riemerella anatipestifer RA-YM]
 gi|325336703|gb|ADZ12977.1| Coproporphyrinogen III oxidase related Fe-S oxidoreductase
           [Riemerella anatipestifer RA-GD]
          Length = 451

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 149/386 (38%), Gaps = 19/386 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
                + +Y+H PFC + C +C  +  + +    +  ++QS + E Q    L   +  I 
Sbjct: 45  SKDEGISIYIHLPFCEQLCTFCACHKRITKQHSVETPYLQSVIKEWQLYLALFDEKPKIK 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +  GGGTP+   P+N+ ++++ I    T++   E + E +P++    + Q     G  R
Sbjct: 105 ELHLGGGTPTFFSPENLKILIEEILSGGTIAEKPEFSFEGHPNNTTREHLQVLYDLGFRR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
           +S GVQ  +E+  + + R             AR I    +S DL++ LP  T  + E  +
Sbjct: 165 VSFGVQDYDEKVQKAINRVQPFENVEKVTQWAREIGYESVSHDLVFGLPFHTWEKMEYTI 224

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++ ++   D L+ Y                 +  LPS      LY   + +    G    
Sbjct: 225 RKTMTLKPDRLAFYSYAHVPWIKGVGQRGFDENDLPSGEEKRKLYENGKQLLEELGYKEI 284

Query: 252 EISNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + S       +S+ N     N+  Y        +G+G  A S     S       EK
Sbjct: 285 GMDHFSLEHDDLYQSMLNKKIHRNFMGYTSGKTQLMVGLGMSAIS----DSWYAFAQNEK 340

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             E++ + V K    V     L+ E       ++ +  +   S  D          IE  
Sbjct: 341 TVEAYQQRVEKGEIPVFRGHILTDEDLKIRRHILNIMCQLETSWTDATAFPELETTIEKL 400

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTM 385
           + ++  G +E  +  ++R TQ G   
Sbjct: 401 KEMEADGLVEISEN-KIRITQAGKAF 425


>gi|163761661|ref|ZP_02168731.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
 gi|162281155|gb|EDQ31456.1| coproporphyrinogen III oxidase [Hoeflea phototrophica DFL-43]
          Length = 449

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 153/399 (38%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +   +L +Y+H P+C + C +C  N+   R     + ++ +   E++ +  L  P   ++
Sbjct: 42  KPGQTLSLYIHIPWCDRLCWFCGCNTKQTRRYDPLKTYLAALENEIETISGLVDPGCRVT 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++  GGG+P++++P+++  +   +   +      EI++E +P+ ++ + +    + G+ R
Sbjct: 102 ALHLGGGSPTMLKPEDMVWLDKALRSRFHFDDGAEISVEMDPNDLDADKYDALAEIGLTR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMEL 191
            S+GVQ  +E+  + + R     +    +   R    R ++ D++Y LP QT    +  +
Sbjct: 162 ASIGVQDFDEKVQQAINREQTFEQTREVVEQVRARGVRSVNCDVLYGLPHQTRQSVDRTI 221

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++ +S   D ++L+        +        +  LP         N   S  +A G  + 
Sbjct: 222 EQVVSLRPDRIALFGYAHVP-WMKTHQKMIDEAALPDVTERFAQMNRASSSLTAAGYTSI 280

Query: 252 EISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I + +          A      N+  Y        IG+G  +  ++  G  +   S   
Sbjct: 281 GIDHFALPADSLAIAAASGAMRRNFQGYTSDTADALIGMGASSIGQLPQGYIQNQPST-- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL----- 354
               + + V      VV    LS E +    ++  L      S        G        
Sbjct: 339 --GEYQRQVNLGRLPVVRGFELSEEDRLRARIIELLMCDFAFSFSTIRHEFGGAAEQVLD 396

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + E        G IE       + T +G   + S+ +  
Sbjct: 397 EAEYLAGCDTDGMIE-FSGGLFQVTDKGRPFVRSIASAF 434


>gi|254481233|ref|ZP_05094478.1| oxygen-independent coproporphyrinogen III oxidase [marine gamma
           proteobacterium HTCC2148]
 gi|214038396|gb|EEB79058.1| oxygen-independent coproporphyrinogen III oxidase [marine gamma
           proteobacterium HTCC2148]
          Length = 478

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 85/412 (20%), Positives = 166/412 (40%), Gaps = 28/412 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           M+    ++N+        L +Y+H PFC   C YC  N  V R K   + +++S   E+ 
Sbjct: 50  MQQYRDWQNSDGDHQRAPLSLYLHVPFCSDICYYCACNKIVTRKKNAAQQYLKSLQHEII 109

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSV 117
              +L G  R I+ + +GGGTP+ ++   I  ++  +A ++ +      E +IE +P +V
Sbjct: 110 LQSELVGDQRPITQMHWGGGTPTYLDHAQITELMHLLASHFRLLDKGYREYSIEIDPRTV 169

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLI 176
           E +     +  G NRISLG+Q  +    + + R  +  +  + +   R + F  +SFDLI
Sbjct: 170 ENSTIALLKGVGFNRISLGIQDFDPLVQKAVNRVQSYPQIASLVDCIRAHNFRSLSFDLI 229

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q        L + +S   D ++ Y         F        L LP  N  + L+
Sbjct: 230 YGLPHQDRHTMTETLGKVISLRPDRIACYNYAHLPE-RFSSQRAIDRLSLPEPNEKLLLH 288

Query: 237 NLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRY-----GDYIGIGPGAHS 284
            +        G     + ++       +    E     N+  Y      D +G+G  + S
Sbjct: 289 EIISHTLQDAGYLHIGMDHYVMPQDELAVAQGEGRLQRNFQGYSLHMADDLLGLGVSSIS 348

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++        +  E+  +++ +++      V     ++ + +    ++M L     + + 
Sbjct: 349 QIGD----FYLQNERELDAYYQLLDAGALPVTRGCRVNDDDKLRRHIIMTLISELKLDIS 404

Query: 345 DWEMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           D     G +     +R L           +E  + + +  T+RG   L ++ 
Sbjct: 405 DCNRQFGIDFSHMFQRQLDQLAPMVADQLLEISENT-ISVTKRGRPFLRNIC 455


>gi|87311775|ref|ZP_01093890.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
 gi|87285559|gb|EAQ77478.1| coproporphyrinogen III oxidase [Blastopirellula marina DSM 3645]
          Length = 436

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 163/407 (40%), Gaps = 21/407 (5%)

Query: 2   KYLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            Y+   +  +  +      LG+Y+H PFC K+C +C F  +  +     E ++ + + E+
Sbjct: 27  DYIPDLQQALASEPRPGVPLGLYLHVPFCRKRCKFCYFRVYTDKNGSEVETYVSALVDEI 86

Query: 60  QWMRQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           + + +    G R    ++FGGGTPS + P+ +  + D + K+ +     E+T E  P ++
Sbjct: 87  ELVSKQAAMGGRPFRFVYFGGGTPSFLSPKQLQRLEDRLRKSISWDQAEEVTFECEPGTL 146

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                +  R  GV R+SLG++S  ++ L   GR H + E   A        FP ++ DLI
Sbjct: 147 SETKVKTLRDMGVTRLSLGIESFSDKILEENGRAHLSKEVYKAWEWIEKAQFPNVNIDLI 206

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
             +  +T   W   L + L  + + +++YQ+ +   T++ K      +  P  +      
Sbjct: 207 AGMVGETWDTWRENLVKTLELSPECVTIYQMELPFNTVYSKDILGNKIETPVADWPTKRA 266

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAESL----HNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
            ++ +          + S ++ +   +     +  N +   D +  G  +   +    ++
Sbjct: 267 WVSYAFDELAKAGYSQSSAYTMIKDPTKISFSYRDNLFGGADLLATGVASFGHISGVHYQ 326

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQ-ADEFLMMGLRLREG-ISVKDWEMLA 350
                  +      ++ K    +      + EQ    E +   L L+ G + V  ++   
Sbjct: 327 NKTEWADYTG---DLLEKKQLPLKRAYRPTPEQMLIRETI---LLLKRGYLDVDYFQTKF 380

Query: 351 GRNL---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G N+              G    V  +R+  T+ G+   D ++    
Sbjct: 381 GVNIVEKWRPIWDEYVETGL-ATVDGNRIELTRDGLLRADGLLPPFF 426


>gi|120435769|ref|YP_861455.1| coproporphyrinogen III oxidase [Gramella forsetii KT0803]
 gi|117577919|emb|CAL66388.1| oxygen-independent coproporphyrinogen III oxidase [Gramella
           forsetii KT0803]
          Length = 454

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 82/393 (20%), Positives = 147/393 (37%), Gaps = 20/393 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           S  + +Y+H PFC   C +C  N  + +    +  +++S L E      L     I   +
Sbjct: 49  SEGISIYIHLPFCESLCTFCGCNKRITKNHSVEVPYLESVLKEWGMYCNLFDEIPIIKEL 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+    +N+ L+L GI K    + + E++ E +P++    +   +   G  R+S
Sbjct: 109 HLGGGTPTFFSAENLKLLLSGIFKKSLKAEDAELSFEGHPNNTSFEHLSLFSSFGFTRVS 168

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   EQ  + + R             AR N F  +  D+I+ LP QT       ++R
Sbjct: 169 YGVQDYNEQVQKAIHRVQPFENVKRVTEEARTNGFTSVGHDIIFGLPFQTKEHIIHTIER 228

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D ++ Y                 D  LPS +   + Y   + +    G     +
Sbjct: 229 TKELMPDRIAFYSYAHVPWIKGNGQRGFKDEDLPSADGKREQYETGKKMLLEAGYVEIGM 288

Query: 254 SNHSFLG---AESLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +       E+L N     N+  Y        IG+G  A S    G  +      K+ 
Sbjct: 289 DHFALPSDSLFEALENKRIHRNFMGYTASKTKTMIGLGVSAISDSWYGFAQNV----KNV 344

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDIECER 360
           E +  +V  N   +     L+ E       ++ L  +   S              +   +
Sbjct: 345 EEYQNLVENNILPIYRGHILNEEDLIIRKHILNLMCKLQTSWYTGNQFFKALPQTLFSLK 404

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +Q+ G +E +  + L+ T++G   + +V    
Sbjct: 405 EMQKDGLLE-IDTNFLKVTEKGRPFVRNVCMAF 436


>gi|77458040|ref|YP_347545.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens Pf0-1]
 gi|77382043|gb|ABA73556.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens Pf0-1]
          Length = 460

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 155/401 (38%), Gaps = 28/401 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + +    L +YVH PFC   C YC  N  + + +     ++Q    E+Q +   L   + 
Sbjct: 47  SRKALRPLSLYVHVPFCANICYYCACNKVITKDRGRALPYLQRLEQEIQLIACHLDPAQK 106

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  + FGGGTP+ +    +  ++  + K++ +    + +  IE +P   + +     R+ 
Sbjct: 107 VEQLHFGGGTPTFLSHDELRQLMAHLRKHFNLLDDDSGDYGIEIDPREADWSTMGLLREL 166

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+S+G+Q L+    R + R  +  E  A I  AR + F  ++ DLIY LPKQT   +
Sbjct: 167 GFNRVSIGLQDLDPAVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPKQTPDNF 226

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              ++  +S   D LS++         F    +     LPS    +++   T    +A G
Sbjct: 227 ARTVEEVISLQPDRLSVFNYAHLPE-RFMPQRRINGNELPSPAQKLEMLQRTIEQLTAAG 285

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           ES    N+  Y      D IG+G  A S++      +  
Sbjct: 286 YRYIGMDHFALPDDELAIAQEESTLQRNFQGYTTHGHCDLIGLGVSAISQIGD----LYC 341

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                   +   +     A       +++ +    ++  L     +   + E     +  
Sbjct: 342 QNSSDLNHYQNTLAGAQLATSRGLVCNADDRLRRAVIQQLICNFSLDFAEIERSFNIDFQ 401

Query: 356 IEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     + + + G IE +   R+     G  ++ SV 
Sbjct: 402 GYFGALWPQLQGMAQDGLIE-LDRERITVLPAGRLLVRSVC 441


>gi|251773101|gb|EES53655.1| oxygen-independent coproporphyrinogen III oxidase [Leptospirillum
           ferrodiazotrophum]
          Length = 458

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 80/399 (20%), Positives = 145/399 (36%), Gaps = 27/399 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +  + L +Y H PFC   C +C  ++ + R K   E +      E+  +  +  P R 
Sbjct: 45  SNRRGDPLSLYFHIPFCESLCYFCGCSTIITRDKSRAEEYNDYLARELGILSSVLDPKRR 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAG 129
           +  +  GGGTPS + P     + + I KN+ V     EI++E +P        +  R  G
Sbjct: 105 VIQLHLGGGTPSSLTPFQTRRLFESINKNFDVDYREGEISVEIDPRFASDAYLETLRTVG 164

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
           VNRIS+GVQ  + +    + R       +      R+  F  ++ DLIY LP QT+  + 
Sbjct: 165 VNRISMGVQDFDPKVQEAVHRVQPEEVTVRVAKKVRDLGFHSLNIDLIYGLPFQTVESFS 224

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L + +  + D ++++        L   M    +  LP  +    L  L     +  G 
Sbjct: 225 RTLDKVIEISPDRIAVFNYAHVP-WLKKHMVLIREETLPPPDAKFGLIRLIGDKLAGAGY 283

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
               + + +           E     N+  Y      + +G+G  A S +     R    
Sbjct: 284 RFIGMDHFARPDDELARAQREKTLYRNFQGYTTKKNAELVGVGVTAISMLD----RAYFQ 339

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD- 355
             +    +   +            LS + +    ++  +     I         G + D 
Sbjct: 340 NARALPDYASRILSGRMGTFRGFRLSEDDRMRREIISHIMCDLEIDRATALSPFGASFDR 399

Query: 356 -----IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                I    N    G +E +   ++R T  G   L ++
Sbjct: 400 VFESEIATLENFVPDGLLE-ITPDKIRITDLGRIFLRNI 437


>gi|307154070|ref|YP_003889454.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
 gi|306984298|gb|ADN16179.1| oxygen-independent coproporphyrinogen III oxidase [Cyanothece sp.
           PCC 7822]
          Length = 469

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 75/411 (18%), Positives = 155/411 (37%), Gaps = 32/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQ 60
           ++L A   N   +  + L +Y H PFC   C +C  N  V + +    + ++      ++
Sbjct: 48  EFLEAI--NRGNKAKSPLSLYFHIPFCQSACYFCGCNVIVTQQQARAVDPYLNYLSKNIE 105

Query: 61  WMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +       R +  + +GGGTP+ +  ++I ++ + I +++    + EI+IE NP  V+ 
Sbjct: 106 SVSSFIDSDRPVVQLHWGGGTPNYLNLEHIEILWNKINQHYRFDEDAEISIEINPRYVDR 165

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           N     R  G NRIS G+Q    +    + R          +   R   F  ++ DLIY 
Sbjct: 166 NYILFLRHIGFNRISFGIQDFNPRVQEAINRVQPEEMLFNVMSWMREAGFESVNVDLIYG 225

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q    ++  +Q+ +    D ++++           + +   +  LP     + +  +
Sbjct: 226 LPYQNRDTFKETIQKTIKLNPDRIAVFNFAYVPWMKPVQKNLPLE-ELPDATEKLAMLQM 284

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
           T     A       + + +    E         LH  N+  Y      +  G G  + S 
Sbjct: 285 TIEELQAANYVFIGMDHFAKPNDELTLAQQAGKLHR-NFQGYTTKPESELFGFGLTSISM 343

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF-LMMGLRLREGISVK 344
           +    H V +   K  + + + +      +    +L+         ++M L     +  +
Sbjct: 344 L----HDVYVQNHKRLKDYYRAIEAGQLPIERGVYLAQSDNILRRQVIMELMCHFRLDKR 399

Query: 345 DWEMLAGRNLD------IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             E     + D       +  + L+  G I+     R+  T  G  ++ ++
Sbjct: 400 AIETKYNIHFDEYFSWEEQALKALENDGLIDLFS-DRIEVTPIGRLLIRNI 449


>gi|305665397|ref|YP_003861684.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
 gi|88710152|gb|EAR02384.1| coproporphyrinogen III oxidase [Maribacter sp. HTCC2170]
          Length = 462

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 79/392 (20%), Positives = 148/392 (37%), Gaps = 18/392 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
              + +Y+H PFC   C +C  +  + +    +  +I S L E +    L G + I   +
Sbjct: 57  KEGISIYIHLPFCESLCTFCGCHKRITKQHTVETPYIDSLLKEWKLYCNLFGSKPIIKEL 116

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P+N+ +++DGI +    S   E + E +P++    + Q     G  R+S
Sbjct: 117 HLGGGTPTFFSPENLKMLIDGIFRLAERSREYEFSFEGHPNNTTKEHLQTLYDVGFRRVS 176

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   E+  + + R             AR I    +  D+I+ LP QT+   E  + +
Sbjct: 177 YGVQDYNEKVQKSIHRVQPFENVKKVTQAAREIGYESIGHDIIFGLPHQTLEHVEETILK 236

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +   D L+ Y                 D  LPS +     Y   + + S  G     +
Sbjct: 237 TKALMPDRLAFYSYAHVPWLKGNGQRGFKDEDLPSADEKRIQYEKGKELLSKVGYEEIGM 296

Query: 254 SNHSFLGAESLH--------NLNYWRY---GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            + +   ++SL+        + N+  Y      + +G GA S     S        K  E
Sbjct: 297 DHFALE-SDSLYQSMISGELHRNFMGYTASKTKLMVGLGASSISD--SWYSFAQNVKSIE 353

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECERN 361
            +  +V      +     L+ E Q     ++ L  R   S +          + +     
Sbjct: 354 EYKHLVDNGVIPIYRGHILTKEDQKIRQHILNLMCRFRTSWEKEGERFPELPIVMGKLHE 413

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++  G ++ +  + L+ T +G   + ++    
Sbjct: 414 MELDGLVD-IGLNELKVTPKGQPFIRNICMAF 444


>gi|148258032|ref|YP_001242617.1| coproporphyrinogen III oxidase [Bradyrhizobium sp. BTAi1]
 gi|146410205|gb|ABQ38711.1| coproporphyrinogen III oxidase, anaerobic [Bradyrhizobium sp.
           BTAi1]
          Length = 450

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 87/411 (21%), Positives = 161/411 (39%), Gaps = 31/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L A     T        +Y+H PFC   C YC  N+ V +       +  +   E+  
Sbjct: 37  EWLRAIPTTATA------SLYLHVPFCRSMCWYCGCNTMVAKRDEPIAVYESALRCEIDM 90

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + +  G R  +  I FGGGTP+++ P++   ++  +  ++ V  + EI IE +P ++   
Sbjct: 91  VSRQIGRRLQVGHIHFGGGTPTIMAPESFVDLVGSLRHSFFVLPSAEIAIEIDPRTLTRA 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
                  +GVNR SLGVQS +    + + R  +  +  AA H  R +    ++FDLIY L
Sbjct: 151 MIAALGASGVNRASLGVQSFDPLVQKAINRVQSFEQTAAATHGLREVGVAGINFDLIYGL 210

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q +      ++R++    D LS++       +      K  D  LP      D   + 
Sbjct: 211 PHQNVASCLDTVRRSIELRPDRLSVFGYAHVP-SFKTHQRKIQDTALPDSLERYDQACVI 269

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
                  G     + + +           E   + N+  Y        IG G  A  ++ 
Sbjct: 270 GEALKDAGYVQIGLDHFALPADPMTIAFREGRLHRNFQGYTTDANDLLIGFGASAIGQLP 329

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  + A  +     ++ + +     A V+   L+ + +    ++  +    G+ +    
Sbjct: 330 QGYIQNAPQV----RAYEEKIASGSLATVKGYGLTDDDRLRADIIERIMCDYGVDLDVIC 385

Query: 348 MLAGRNLDIECE-----RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G   D   E     ++L   G +E ++   L  T+    ++ SV A  
Sbjct: 386 TRHGMAADAMLESAPRLQSLISDGVVE-LRGGSLAVTEHSRFLVRSVAAAF 435


>gi|255322053|ref|ZP_05363201.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           showae RM3277]
 gi|255300866|gb|EET80135.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           showae RM3277]
          Length = 453

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 84/407 (20%), Positives = 154/407 (37%), Gaps = 28/407 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL   +N      S  L +Y+H PFC   C +C  N      +  +  ++Q    E+  
Sbjct: 34  DYLRELKNR---DASRPLSLYLHLPFCRSACYFCGCNVIYTSKEDRKTRYMQYLQKELDL 90

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEV 119
           +   L     +  + FGGGTP+      +  I+    AK    S   EI+ E +P  +  
Sbjct: 91  LAANLDTSAPVLQMHFGGGTPTFYGADQLDEIIKMIKAKFKNFSPEAEISCEIDPRFLTP 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
                    G NR+S GVQ  +E+  + + R         A+ +AR      ++ DLIY 
Sbjct: 151 EQLDVLISHGFNRVSYGVQDFDERVQKEIHRIQPYEITKNAVDMARAKGINSINMDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  ++  L +AL+ + D L+++        +   M K  +  LPS    +++   
Sbjct: 211 LPYQTLESFKATLDKALTLSPDRLAVFNYAHVP-WIKKSMRKFDEATLPSPKTKLEILKY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T      +G     + + +  G E        +LH  N+  Y      D IGIG  +   
Sbjct: 270 TAEFFIKNGYKMIGMDHFAKPGDELFAALANGTLHR-NFQGYTTKGGADLIGIGLTSIG- 327

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                 R      K  + + K +        +  +L+ +    + ++M L     + +K 
Sbjct: 328 ---EGQRYYAQNFKDMDEYEKALDSGVLPYYKGIYLTGDDLIRKAVIMSLMSNFALDIKA 384

Query: 346 WEMLAGRNLDIECERNLQRQGFIER---VQFSRLRCTQRGMTMLDSV 389
            E           + +L     +     V   ++   + G  ++ ++
Sbjct: 385 VEAKFDIKFFEYFKDDLVELENLSEFVTVTPEKISVNETGTLIIRNI 431


>gi|225155197|ref|ZP_03723692.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
 gi|224804144|gb|EEG22372.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
          Length = 427

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 149/401 (37%), Gaps = 25/401 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSI 71
           G   N L +Y H PFC  +C +C  N+ +         ++   + EM    R++   R +
Sbjct: 19  GAARNPLSLYFHLPFCQARCWFCGCNNIITTRVDAAAEYLDDLVAEMCFMARRIDRERPV 78

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + +  GGGTP+      +    D + + +T +   EI++E +P  ++      +R  G  
Sbjct: 79  TQLHLGGGTPTFFPADQLTRFADAVHRLFTFAPGAEISVEIDPRHLDAQQVLAFRVLGAR 138

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R SLGVQ  +      + R    S    A+HL R   F  ++ DLIY LP+QT   +E  
Sbjct: 139 RASLGVQDTDPAVQTAIHRVQPQSVNQRAVHLLREAGFTSINIDLIYGLPRQTPATFERT 198

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L+ + D LS++      G    +   +    LP     + L  L      A G   
Sbjct: 199 LDDVLALSPDRLSVFGYAHIPGLKPAQRIFEQQETLPGFEERLALQQLANDRLLAAGYVN 258

Query: 251 YEISNHSFL-------GAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + +++          +E   + N+  Y           G  A S    G         
Sbjct: 259 VGLDHYARPCDELARAASEGGLHRNFQGYSTRAGASLYAFGISAISSTPDG----YWQNH 314

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---- 354
           K   ++ + +      V     L+ E      ++M +     +         G +     
Sbjct: 315 KDLFAYREALAARRLPVERGWRLTPEDHRRRAIVMAIMCDRRLDYAAISREIGVDFARTY 374

Query: 355 --DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             ++    +L+  G +E V    LR T+ G+ +L  +    
Sbjct: 375 ASELASLTDLEGDGVVE-VNGDGLRVTEAGLPLLRVIAQRF 414


>gi|157164719|ref|YP_001466528.1| coproporphyrinogen III oxidase [Campylobacter concisus 13826]
 gi|112800657|gb|EAT98001.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           concisus 13826]
          Length = 453

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 88/406 (21%), Positives = 158/406 (38%), Gaps = 28/406 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-W 61
           Y+   EN         L +Y+H PFC   C +C  N         +E +I+    E++  
Sbjct: 35  YVKELENR---DKKRPLSLYLHLPFCRSACYFCGCNVIYTSKDDRKEKYIRYIEKELEIL 91

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVN 120
            R L     +  + FGGGTP+      +  I+    AK    S   EI+ E +P  +   
Sbjct: 92  ARHLDTSTEVLQMHFGGGTPTFYNAAQLDEIIKLIKAKFKNFSKEAEISCEIDPRFLTNE 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYAL 179
                   G NRIS GVQ  +E+  + + R         A+ +A +     ++ DLIY L
Sbjct: 152 QLDVLISHGFNRISYGVQDFDEKVQKEIHRIQPYEITQNAVKMARQKGIKSINMDLIYGL 211

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++  ++  L+ AL+   D L+++        +   M K  +  LP+  V +++   T
Sbjct: 212 PYQSLESFKKTLELALTLDPDRLAVFNYAHVP-WIKKSMRKFDETTLPNPEVKLEILKFT 270

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRV 286
               + +G     + + +    E        +LH  N+  Y      D IGIG  +    
Sbjct: 271 AEFLTKNGYKMIGMDHFAKPNDELFGALANGTLHR-NFQGYTTKGGADLIGIGITSIGEC 329

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           K    R      K  + + K +        +  +LS E    + ++M L    G+++K  
Sbjct: 330 K----RHYAQNHKDMDEYEKAIDSGKLPYAKGIYLSDEDLLRKSVIMSLMSNFGLNIKAV 385

Query: 347 EMLAGRNLDIECERNLQRQGFIER---VQFSRLRCTQRGMTMLDSV 389
           E     N     +  L+    +     V   ++   + G  ++ ++
Sbjct: 386 EDEFHINFFEHFKNELEELKNLSEFVDVTTDKISVNETGTLIIRNI 431


>gi|5678643|gb|AAD46692.1|AF040988_7 oxygen-independent coproporphyrinogen III oxidase [Pseudomonas sp.
           G-179]
 gi|3925398|gb|AAC79446.1| anaerobic coproporphyrinogen III oxidase [Pseudomonas sp. G-179]
          Length = 450

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/401 (20%), Positives = 148/401 (36%), Gaps = 29/401 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
              + + +YVH PFC   C YC  ++ +        +++     E+  +      +  I+
Sbjct: 43  DDGDPISLYVHIPFCRSMCWYCGCHTTITLKDQPILDYLDVLKREISLVADAMPRKPEIA 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I FGGGTP+++EP     +   +   +      E+ +E +P  +         KAGV R
Sbjct: 103 TIHFGGGTPTIMEPNEFLDLDFHLRSRFAFVEKTELAVEIDPRPLTDEMICALGKAGVTR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS + +  + + R   A +  AA   L       ++FDLIY LP QT+       
Sbjct: 163 ASLGVQSFDPKVQKAINRIQTAKQTRAATEGLRAAGVGSINFDLIYGLPHQTVASAIETA 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+S   D  +++       T         +  L                    G    
Sbjct: 223 ETAISMRPDRFAVFGYAHVP-TFKKHQRLIDEAALADAAGRHAQAEAIAETLLDAGYRQI 281

Query: 252 EISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
            + + +  G          SLH  N+  Y        IG G  A  R   G  +  ++I 
Sbjct: 282 GLDHFALPGDSLSIAAKTGSLHR-NFQGYTTDACETLIGFGASAIGRSAHGYVQNEVAIG 340

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +    + + V     A  +   L+++ +    ++  +     + +       G + D   
Sbjct: 341 R----YAQSVATGQLATAKGYRLTADDRLRAEIIERIMCDFSVDLASICQSHGVSPDTVV 396

Query: 359 ERNLQRQGFI----ERVQFSRLRCTQRG--MTMLDSVIANL 393
           + N Q Q  +      ++   LR   RG    ++ +V A+ 
Sbjct: 397 DGNSQLQRLLADEIVTLEDGILRL--RGEERFLVRAVAASF 435


>gi|307545439|ref|YP_003897918.1| oxygen-independent coproporphyrinogen III oxidase [Halomonas
           elongata DSM 2581]
 gi|307217463|emb|CBV42733.1| oxygen-independent coproporphyrinogen III oxidase [Halomonas
           elongata DSM 2581]
          Length = 473

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 144/403 (35%), Gaps = 36/403 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
              L  YVH PFC   C YC  N  +         ++   + E++    L    R ++ +
Sbjct: 65  PKPLSAYVHIPFCKSLCYYCACNKIITHNTQRAAEYLGWLIREIEVQGALFDDERRMTQL 124

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNR 132
             GGGTP+ +    +  +L  +   +  +     E +IE +P +V        R  G NR
Sbjct: 125 HLGGGTPTYLSHAQLVALLTALDNAFHFAPEGEREFSIEVDPRTVTPEQVSALRGLGFNR 184

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ  + +  R + R     +            F  +S DLIY LP+QT + ++  L
Sbjct: 185 LSLGVQDFDIEVQRAVNRVQGEEQVAALMAAAREAGFDSLSVDLIYGLPRQTRSSFDATL 244

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + ++   D ++ Y         F          +P     ++L  LT       G    
Sbjct: 245 AKLIALRPDRIAAYSYAHLPE-HFKAQRLIRPADMPPPERKLELLELTIERLCGAGYDYI 303

Query: 252 EISNHSFLG---AESLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +  G    ++  N     N+  Y      D +G+G  A  R+     +      K
Sbjct: 304 GMDHFALPGDELCQARQNGTLQRNFQGYSTHADCDLVGLGITAIGRIGDTYSQNV----K 359

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +      V     L+ + +    ++ GL  +  + + + E   G +      
Sbjct: 360 DIAQYRQRLEDGRLPVKRGYCLNDDDRLRGDVIHGLMCQGLVDIPNLEARHGIDFGDYFA 419

Query: 360 RNLQR------QGFIERVQFSRLRCT--QRGMTMLDSVIANLA 394
             L+R       G IE         T    G  M    + NLA
Sbjct: 420 EALERLVEPAADGLIELRDD---ALTVLPAGRLM----MRNLA 455


>gi|254785994|ref|YP_003073423.1| coproporphyrinogen III oxidase [Teredinibacter turnerae T7901]
 gi|237683709|gb|ACR10973.1| oxygen-independent coproporphyrinogen III oxidase [Teredinibacter
           turnerae T7901]
          Length = 471

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 79/415 (19%), Positives = 153/415 (36%), Gaps = 32/415 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L A E +     S  L +Y H PFC   C YC  N  +   K     ++++   E+  
Sbjct: 42  EWLRAAEKS--NSASAPLSLYFHIPFCDTVCYYCACNKIITANKKLAIPYVEALKKEIDM 99

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVE 118
               +   R +  + +GGGTP+ +  + +  ++      + +  + + E +IE +P  V 
Sbjct: 100 QAIYIDRSRPVDQLHWGGGTPTYLTDEQMHDLMAHTRSAFNLLGNDSGEYSIEIHPKGVS 159

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  R  G NR+S+GVQ  +E     + R ++  E +A +  AR + F  +S DLIY
Sbjct: 160 PERLTKLRALGFNRLSMGVQDFDENVQVAVNRFNSEEEVLALVQAARALDFKSISLDLIY 219

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT   +   L+R L+   D LS++        LF    +     LP     + +  
Sbjct: 220 GLPLQTSASFAKTLERVLALKPDRLSVFNYAHLPD-LFKTQKQIDSSQLPEPQEKLTILR 278

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHS 284
            +       G     + + +    E        +LH  N+  Y      +    G  + S
Sbjct: 279 QSIDTLLQAGYVYVGMDHFALPEDELAKAQQAKNLHR-NFQGYATHGNCEMFSFGVSSIS 337

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                  +      K  +++   + ++   +     LS + +  + ++  L     +   
Sbjct: 338 AFGDTFFQNH----KTIDAYYASLGEDELPLWRGIALSEDDKIRQTVIRELICHFELPFS 393

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             E                  R+L+  G +     S +   + G  ++  +    
Sbjct: 394 KIESQYPIAFSKYFAAELASLRSLEADGLLSIGDNS-IDVNESGRLLIRRICMAF 447


>gi|218263263|ref|ZP_03477439.1| hypothetical protein PRABACTJOHN_03123 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222837|gb|EEC95487.1| hypothetical protein PRABACTJOHN_03123 [Parabacteroides johnsonii
           DSM 18315]
          Length = 455

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/413 (19%), Positives = 152/413 (36%), Gaps = 31/413 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +        Q    +  Y H PFC + C YC  NS+        + ++++   E+  +  
Sbjct: 35  ADALQASNNQKPELISFYFHIPFCHRLCHYCGCNSYPVPEGEIVDRYVEALHKEIDLVLP 94

Query: 65  LTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           L   R  +S I +GGG+P+++    +  + D +   +   +N EI +E +P  +    + 
Sbjct: 95  LLDNRRKVSQIHYGGGSPTVLPAIELEELNDHVLDKFPTIANPEIAVECHPGWIMEQGWV 154

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
              K+G NR+S+GVQ   ++ LR + R  +       + + R++  R++ D +Y LP QT
Sbjct: 155 QLVKSGFNRLSIGVQDFNKEVLRGVNRQSSRIPMEDVMEILRSLDVRVNMDFLYGLPFQT 214

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   ++RA++   D L  +         F +      + LPS +    ++     I 
Sbjct: 215 EESFAQTIERAVAMKPDRLVTFSYAHVP-WAFPRQQILEKVGLPSGDEKSRMFETAHRIL 273

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRVKVG 289
                    + +      E         LH  N+  Y      G     G    S++   
Sbjct: 274 CEADYQPIGLDHFVRKDDELYTASQNGQLHR-NFQGYCTRRTTGQVYAFGVTGISQLGTA 332

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM- 348
             +      K    +++ V      V +   LS E+Q     +  L     I   +    
Sbjct: 333 YAQNT----KDIMEYIEKVEAGILPVAKGYLLSREEQITREAIEMLMCNYRIDWNELSEQ 388

Query: 349 --------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                         D    R     G IE    +++R T  G   + ++ A+L
Sbjct: 389 LSTPARSIKQATAYDEAHLREFAEDGLIE-FDKNQIRMTPEGRLFVRNIAASL 440


>gi|86131884|ref|ZP_01050481.1| coproporphyrinogen dehydrogenase [Dokdonia donghaensis MED134]
 gi|85817706|gb|EAQ38880.1| coproporphyrinogen dehydrogenase [Dokdonia donghaensis MED134]
          Length = 453

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 146/390 (37%), Gaps = 22/390 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIF 75
             + +Y+H P+C   C +C  N  + +    +  +IQS L E+    +L G    +  + 
Sbjct: 49  EGISLYIHLPYCESMCTFCGCNKRITKNHSVEIPYIQSVLKELTLYVKLLGSTPLVKQLH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+   P+++  +LDG+      ++  E++ E +P++    + +   K G  R+  
Sbjct: 109 LGGGTPTFFSPEHLDRLLDGVFSLTNKATEFELSFEGHPNNTTKKHLETLYKQGFARVCY 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ   +   + + R         A   AR +    +  D+IY LP QT       + + 
Sbjct: 169 GVQDYNQNVQKAINRVQPYHNVKTATTAAREVGYSSVGHDIIYGLPFQTQDDVIFTISQT 228

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                D ++ Y                 D  LPS       Y + + +    G     + 
Sbjct: 229 TRLRPDRIAFYSYAHVPWMKGNGQRGFSDQDLPSAEQKRKQYEIGKKMLVEAGYVEIGMD 288

Query: 255 NHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
           + +    +SLH        + N+  Y        +G+G  A S     S        K+ 
Sbjct: 289 HFALKN-DSLHTAQQEGKIHRNFMGYTSSKTQVMVGLGVSAIS----DSWYSFAQNVKNI 343

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-ER 360
           E + ++V      +     L+ E       ++ L      S  D ++      D+    +
Sbjct: 344 EEYQQLVEDGILPIFRGHLLTEEDLTIRQHILNLMCEFKTSWTDQKLHFPEIPDVLIKLK 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L+  G +  +  + +  T++G   + ++ 
Sbjct: 404 ELENDGLV-LIDATGIEITEKGRPFVRNIC 432


>gi|91217726|ref|ZP_01254682.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
 gi|91184064|gb|EAS70451.1| coproporphyrinogen III oxidase [Psychroflexus torquis ATCC 700755]
          Length = 456

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 145/391 (37%), Gaps = 20/391 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
            +  + +Y+H PFC   C +C     + +    +  +I++ L E+    ++ G    I  
Sbjct: 50  KAKHISLYIHLPFCESMCTFCGCTKRITKNHTLELPYIKALLKELSMYSEVLGDGLVIQQ 109

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+    +N+  +L GI K    +++ E + E +P++    + + +   G  R+
Sbjct: 110 LHLGGGTPTFFSVENLEELLMGIFKIADKTADCEFSFEGHPNNTTKEHLEMFNHNGFTRV 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
             GVQ   E   + + R         A   AR   F  +  D+I+ LP QT       ++
Sbjct: 170 CYGVQDYNETVQKAINRIQPFEHVEQATKTAREAGFSSVGHDIIFGLPFQTQEHVLHTIK 229

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + ++   D ++ Y                 +  LP+       Y   +      G     
Sbjct: 230 QTIALMPDRIAFYSYAHVPWIKGNGQRGYSEENLPTPEQKRLQYETGKKGLLEAGYVEIG 289

Query: 253 ISNHSFLGAE-------SLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +    E          + N+  Y        IG+G  A      G  +      K 
Sbjct: 290 MDHFALKTDELYKAQQKGQIHRNFMGYSSSKTDVMIGLGVSAIGDSWYGFAQNV----KT 345

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-E 359
            + + ++VRK    ++    L+ E       ++ L      S ++  +   +  DI    
Sbjct: 346 LKDYYELVRKGTLPLLRGHLLTEEDLIIRKHILNLMCSFKTSWEEEHLQIPQMEDIVFKL 405

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             ++  G ++  + S +  T+ G   + +V 
Sbjct: 406 SEMEADGLVDIAEDS-IAVTEAGKPFVRNVC 435


>gi|217034071|ref|ZP_03439492.1| hypothetical protein HP9810_893g18 [Helicobacter pylori 98-10]
 gi|216943466|gb|EEC22920.1| hypothetical protein HP9810_893g18 [Helicobacter pylori 98-10]
          Length = 345

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 166/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYEDKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYRNARLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVVETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +       N+ + +        YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCTHFDNMIKEVLEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    R L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCALGVELSF--------LDENKVRFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|297380405|gb|ADI35292.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori v225d]
          Length = 345

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYRNANLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N  + I        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNAIKEILEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           LS + +  E L +GLR   G+ +   + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVEISFLDE 310


>gi|83311797|ref|YP_422061.1| coproporphyrinogen III oxidase [Magnetospirillum magneticum AMB-1]
 gi|82946638|dbj|BAE51502.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductase
           [Magnetospirillum magneticum AMB-1]
          Length = 451

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 149/396 (37%), Gaps = 27/396 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           L +Y+H  FC + C +C  ++ + +       ++ +   E++ + +    R +   + FG
Sbjct: 47  LSLYLHIAFCAEMCWFCGCHTKITKRYAPVAAYMDALWREVELVAEALPTRMTARHVHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+++  ++    +D +  ++ +  + E+ +E +P + +    +    AGV R S+GV
Sbjct: 107 GGSPTILSSEDFVRTIDLLKSHFILKPDAEVAVELDPRTADEAYVKAMAGAGVTRASIGV 166

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q L+++  + + R          +        P ++ DLIY LP QT+      + +A+ 
Sbjct: 167 QDLDDKVQQAINRIQPYEVTERVVEWLGKYGVPEVNIDLIYGLPHQTLDGLLATIDKAVR 226

Query: 197 -YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT-SAHGLHAYEIS 254
            +    ++L+        +        +  LP        Y     +     G     + 
Sbjct: 227 GFRPRRVALFGYAHVP-WMKKHQRLIPEETLPDTETRWQQYEQGCRLLTETLGYVQIGLD 285

Query: 255 NHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +           E   + N+  Y        IG G      +  G       +     
Sbjct: 286 HFAAPDDAMAIALREKRLHRNFQGYTTDSATTLIGFGASGIGSLPQGYVVNDGEVH---- 341

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-----LDIE 357
           ++ + + +   A+     ++++      ++  L     I +       G +      ++ 
Sbjct: 342 AYQRSIAEGKLAISRGVAITADDILRREIIERLMCDLEIDLDVVAGRHGSDGSHFAAELA 401

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               LQ  G +E VQ  R+  T  G T++ +V A  
Sbjct: 402 SLAPLQADGLVE-VQGHRIHVTDEGRTLVRAVCAAF 436


>gi|87119916|ref|ZP_01075812.1| coproporphyrinogen III oxidase [Marinomonas sp. MED121]
 gi|86164618|gb|EAQ65887.1| coproporphyrinogen III oxidase [Marinomonas sp. MED121]
          Length = 455

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 162/406 (39%), Gaps = 29/406 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTG 67
             M    +  L +Y H P+C K C YC  N  +       + +++  + E++     ++ 
Sbjct: 38  EKMLMPSNKPLSLYFHIPYCAKLCYYCACNKVISSNYKKGDEYLELLIEEIRLKSLMISE 97

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGY 125
            R +  + FGGGTP+ +     + +++ + +N+ +  N   E +IE +P  ++ +  +G 
Sbjct: 98  DREVRQLHFGGGTPTFLSLSAFSKLMNYLKQNFNMLDNDEGEYSIEVDPREIDQDKLEGL 157

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTM 184
           R+ G NR+S G+Q   ++    + R  +     +  I      +  ++FDLIY LP QT 
Sbjct: 158 RELGFNRLSFGIQDFNKRVQTTINRVQSYELIKSLMIKSRELRYQSINFDLIYGLPYQTQ 217

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +   L + +  + D +S++         F       +  LP  +  + +  L   + +
Sbjct: 218 EGFTKTLNQVIELSPDRISVFNYAHLPK-RFASQRLIPEAQLPDSHTKLGILKLCIEMLT 276

Query: 245 AHGLHAYEISNHSFL-----GAESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHR 292
             G     + + +        A++   L  N+  Y      D I  G  A S++     +
Sbjct: 277 NAGYQYIGMDHFAKPNDSLAKAQNQGELKRNFQGYTTHSNCDLIAFGTSAISQIGHTYVQ 336

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
              +     + + K +     A+++    + + Q    ++M L     +   + E   G 
Sbjct: 337 NHTAT----KDYRKSIENGQLAIMKGYVSNRDDQIRHRVIMSLICNFELDTSEIESEFGI 392

Query: 353 NL------DIECERNLQRQGFIERVQFSRL--RCTQRGMTMLDSVI 390
                   ++   + L++ G +     SRL  + T  G  ++  + 
Sbjct: 393 VFKTYFKNELIALQKLEKDGILTLDGESRLMIKVTDPGKLLIRCIC 438


>gi|208435120|ref|YP_002266786.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
 gi|208433049|gb|ACI27920.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
          Length = 345

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKQALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIYHHARLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +       N+ + +        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSRTHFDNVVKEVLEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   VK         IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVKNERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +  +         IE  +   +         +RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVELS-FLDKNKVKFLIEENKAFIK--------NNRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|207092325|ref|ZP_03240112.1| coproporphyrinogen III oxidase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 345

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 164/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLRHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIHHHANLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H  + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHPKNIAPVIETILKSGIENVSIDLIYNTPLDDENSLKEELKIAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNVIKEALEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ + D+         IE  +   +         +RL  + 
Sbjct: 283 LSDQDKRLEKLFLGLRCVLGVEL-DFLDKNKVKFLIEENKAFIK--------NNRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|261839946|gb|ACX99711.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 52]
          Length = 350

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 111/368 (30%), Positives = 168/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 8   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALNQT-DEPIESIFIGGGT 65

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N ++SS+ EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 66  PNTLSVKSFERIFESIHRNASLSSDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 125

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 126 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 185

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +       N+ + +        YE+SN++   
Sbjct: 186 HLSAYALSIEKNTNLEK--------NAKKPSCTHFDNIIKEVLEGFSFKQYEVSNYAR-N 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 237 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 287

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    R L  +     ++  RL  + 
Sbjct: 288 LSEQDKRLEKLFLGLRCVLGVELSF--------LDENKVRFLIEENK-AFIKNDRLVASD 338

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 339 --FFMADE 344


>gi|332142094|ref|YP_004427832.1| coproporphyrinogen III oxidase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327552116|gb|AEA98834.1| coproporphyrinogen III oxidase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 458

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 83/403 (20%), Positives = 149/403 (36%), Gaps = 25/403 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
            +T   + ++ +YVH PFC   C YC  N  V R+    ++++     E+   R L   +
Sbjct: 45  ALTVSKAKAVSLYVHIPFCKTLCYYCGCNKLVTRHNEKADDYLDYLEKEIVSKRYLADDK 104

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + S+  GGG+PS +       ++  + K++T     E++IE +P +V+    Q  R  G
Sbjct: 105 PVVSLHLGGGSPSFLNKVQHTFLMYLLKKHFTFEVGAELSIELDPRNVDKTYLQNLRGLG 164

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
             RIS G+Q  +    + + R  + S     +  AR   F  ++ DLIY LP Q+   + 
Sbjct: 165 YTRISFGLQDTDYNVQKTINRVQSTSHIADLVSEARTLGFESVNLDLIYGLPNQSEETFA 224

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +    +   D +SL+         F    K     LPS      LYNL  +     G 
Sbjct: 225 STIAATKAMMPDRISLFSYAHLPE-RFAAQRKFAPGTLPSSEEKAALYNLAVNGFKRVGY 283

Query: 249 HAYEISNHSF-------LGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
               + + +           +   + N+  Y      D IG+G  A S +     + A  
Sbjct: 284 EMIGLDHFALRSDSLAIAKHKGKLHRNFQGYTLRGDTDLIGVGVSAISTIGNAFTQNA-- 341

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K  + + K + +   +      L+ +      ++  L     +  +          D 
Sbjct: 342 --KDLKEYYKRIDRQLPSAKVGLSLTPDDLVRRDVISSLMCNLSVDKQSISSKHHIIFDE 399

Query: 357 EC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                      L   G IE +    +R  +     + +V A  
Sbjct: 400 YFSEALSNLERLADDGIIE-ISAHHIRVPEHARIFIRAVCARF 441


>gi|317011425|gb|ADU85172.1| coproporphyrinogen III oxidase [Helicobacter pylori SouthAfrica7]
          Length = 345

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++++ +E +IQ+   +++   + T    I S+F GGGT
Sbjct: 3   LYIHIPFCESKCGYCAFNSYENKHEL-KEAYIQALCLDLKHALKQT-HEKIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +  N  QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKSFEKIFESIHQNARLSVDCEITTEANPELISKNWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P  +    + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGMENISIDLIYNTPLDSEKSLKEELRLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +   VD  N+ +    +     YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCVDFDNVVKETLESFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V+         IE + +  L+          + E 
Sbjct: 232 YQVKHNLAYWEAKDYLGCGAGAVGCVENERFYAKKLIESYIKDPLQR---------QVEP 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD      L ++     ++ +RL  + 
Sbjct: 283 LSEKDKRLEKLFLGLRCILGVELHL--------LDAHKVELLIKENK-AFIKNNRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|255534788|ref|YP_003095159.1| coproporphyrinogen III oxidase [Flavobacteriaceae bacterium
           3519-10]
 gi|255340984|gb|ACU07097.1| Coproporphyrinogen III oxidase, oxygen-independent
           [Flavobacteriaceae bacterium 3519-10]
          Length = 459

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 82/392 (20%), Positives = 144/392 (36%), Gaps = 27/392 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----- 69
            +  + +Y+H PFC + C +C  +  + +    +  +++S L E      L         
Sbjct: 48  DAEGISIYIHLPFCEQLCTFCACHKRITKQHSVEIPYLESVLKEWDLYLDLLQGEGSIGG 107

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I  +  GGGTP+   P N+  +L+GI     ++ N E + E +P++    + Q    
Sbjct: 108 KPKIKELHLGGGTPTFFSPANLKTLLEGIFSKADIAENPEFSFEGHPNNTTREHLQTLYD 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQ 186
            G  R S GVQ  + Q  + + R           + AR I  + +S DL++ LP  T  +
Sbjct: 168 LGFRRASFGVQDYDPQVQKAINRIQPFENVERVTNWAREIGYKGISHDLVFGLPFHTWEK 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            E  +++ L    D L+ Y                 +  LPS      LY   + +    
Sbjct: 228 MEFTIRKTLELKPDRLAFYSYAHVPWIKGVGQRGFDENDLPSGEEKRKLYENGKRLLEEL 287

Query: 247 GLHAYEISNHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRV 293
           G     + + +    + L+        + N+  Y        IG+G  A S     S   
Sbjct: 288 GYIEIGMDHFALP-HDDLYQSMVSGDIHRNFMGYSSGKTQLMIGLGMSAIS----DSWYA 342

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
               EK  E + KMV +    VV+   L+ E       ++ L  R   S           
Sbjct: 343 FGQNEKTVEGYQKMVEEGRIPVVKGHILNGEDLNIRQHILNLMCRLETSWDLGTSFPEIG 402

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
             +E  + ++  G +     S +  T +G   
Sbjct: 403 DALEALKEMENDGLVTLTDNS-ITITDKGRAF 433


>gi|312130052|ref|YP_003997392.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella
           byssophila DSM 17132]
 gi|311906598|gb|ADQ17039.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella
           byssophila DSM 17132]
          Length = 442

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 91/402 (22%), Positives = 160/402 (39%), Gaps = 26/402 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +E N+       L +Y+H P+C   C +C  +  + +    +  +I++ L E +   +
Sbjct: 30  QDWETNVKNAPQKRLSLYIHLPYCESLCTFCACHKRITKNHSYEVPYIEAVLKEWKMYVE 89

Query: 65  LTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             G R  I  I  GGGTP+   P+N+AL++ GI +  ++  + E + E +P++    + +
Sbjct: 90  WMGERPLIEEIHLGGGTPTFFSPENLALLIKGILEWASLPDSYEFSFEGHPNNTTYEHLK 149

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
                G  R+S GVQ  + Q  + + R             AR +    +S DL++ LP Q
Sbjct: 150 VLYDLGFRRVSFGVQDYDPQVQKAIHRIQPFEAVEKVTLAARELGYTSISHDLVFGLPFQ 209

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +   +++ LS   D LSLY                 +  LP+      LY + + +
Sbjct: 210 NLEGFTETVKKTLSLNPDRLSLYSYAHVPWIKGIGQRGYSEEDLPAGEQKRTLYEMAREL 269

Query: 243 TSAHGLHAYEISNHSFLGA---------ESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
             A+G   YE+    F  A         E   N N+  Y        IG+G  A S V  
Sbjct: 270 YEANGY--YEVGMDHFAKANDKMFQAYQEGTLNRNFMGYTTTNSPLLIGLGASAISDVWS 327

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +     EK+ E +L+MV +    VV+    S E      ++  +  +      +W  
Sbjct: 328 AMAQN----EKNVEEYLRMVNEGKIPVVKGHLQSEEDLQRRQIIHDIMCKF---RAEWPD 380

Query: 349 LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                        L+  G I+    + L  T+ G   + +V 
Sbjct: 381 EFWNEELERQLEELRTDGIIQYT-PTSLEVTELGKAFIRNVC 421


>gi|308069386|ref|YP_003870991.1| coproporphyrinogen III oxidase [Paenibacillus polymyxa E681]
 gi|305858665|gb|ADM70453.1| Coproporphyrinogen III oxidase [Paenibacillus polymyxa E681]
          Length = 472

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 160/377 (42%), Gaps = 13/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C +C+  +   +     + ++ +   + +    + G R  S    GGGT
Sbjct: 82  LYMHIPFCAARCGFCNLFTLPDKRLDVHKEYVDALERQAKQWAPIMGRRPFSRFAIGGGT 141

Query: 81  PSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+L+E   +  + D       +      I++E +P +V  +  +  ++ G +R+S+G+QS
Sbjct: 142 PTLLEAPLVERLFDIAENMMGLDPKQASISVETSPDTVTEDRLEVLKRRGTDRVSMGIQS 201

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             E     + R         A+       FP ++ DLIY LP QT+  W   L+ ALSY+
Sbjct: 202 FVESESAAIYRPQKPKLVREALERLVEYNFPLLNVDLIYGLPGQTVETWLYSLEEALSYS 261

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              + LY L I + T+    +   D      ++ + LY + +      G   Y +   + 
Sbjct: 262 PGEIFLYPLYIRENTILKPGYTGLD-----HDIRLTLYEVARERLKQAGYVQYSMRRFAK 316

Query: 259 L-GAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLKMVRKNGHA 314
             G  S   L Y  +     G+G GA S  +   +  R  +S           V    H 
Sbjct: 317 NDGISSKELLPYSCQEEGMAGLGCGARSYTRNAHYASRYGVSAAATRSIIADYVAAERHD 376

Query: 315 VVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-DIECERNLQRQGFIERVQ 372
           + +  F L+ ++    F++  L  REG+ +  +    G +L D     +L  +  +  V+
Sbjct: 377 LADYGFILNVDESKRRFILKALLHREGLELSTYAERFGVSLSDDFTGMSLLLESGMAVVE 436

Query: 373 FSRLRCTQRGMTMLDSV 389
              LR T+ GM   D++
Sbjct: 437 EGTLRLTEEGMAYSDAI 453


>gi|326565657|gb|EGE15820.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 12P80B1]
 gi|326567122|gb|EGE17244.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC1]
          Length = 469

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 152/399 (38%), Gaps = 26/399 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  L +Y+H PFC   C YC  N  + +      +++     E++  + L   ++
Sbjct: 57  VNRNPAIPLSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKT 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  +  GGGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G
Sbjct: 117 WVKQLHLGGGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQ L+++    + R  +       +  A+   F   + DLIY LP QT     
Sbjct: 177 FNRLSFGVQDLDKKVQIAVNRVQSLELIQNVMQEAQALGFSSTNIDLIYGLPHQTPASMN 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++ +  + D LS++         F +     +  LPS    + ++    +     G 
Sbjct: 237 ATIEQIIKLSPDRLSVFNYAHLPERFFAQKR-ILEADLPSPTDKLTMFGNIITSLGDAGY 295

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               I + +           +   + N+  Y      D +G G  A S++     +   +
Sbjct: 296 QYIGIDHFAKPDDAMAIAQRQGKLHRNFQGYAILGECDLLGFGVSAISQIGKHILQNPTA 355

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-- 354
           +      +   V  +    ++      +      ++M L   + +S +D       +   
Sbjct: 356 LV----DYQATVLADTLPAIKHIQSDDKDALRRHVIMNLLCHDYMSFEDLHARFDIDAKE 411

Query: 355 ----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               +I+  +++Q  G ++  +        +G  +  S+
Sbjct: 412 YFANEIKNLQDMQTDGLVQIDEDGITIL-PKGRILGRSI 449


>gi|326562161|gb|EGE12489.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 7169]
          Length = 469

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 152/399 (38%), Gaps = 26/399 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  L +Y+H PFC   C YC  N  + +      +++     E++  + L   ++
Sbjct: 57  VNRNPAIPLSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKT 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  +  GGGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G
Sbjct: 117 WVKQLHLGGGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQ L+++    + R  +       +  A+   F   + DLIY LP QT     
Sbjct: 177 FNRLSFGVQDLDKKVQIAVNRVQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMN 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++ +  + D LS++         F +     +  LPS    + ++    +     G 
Sbjct: 237 ATIEQIIKLSPDRLSVFNYAHLPERFFAQKR-ILEADLPSPTDKLTMFGNIITSLGNAGY 295

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               I + +           +   + N+  Y      D +G G  A S++     +   +
Sbjct: 296 QYIGIDHFAKPDDAMAIAQRQGKLHRNFQGYAILGECDLLGFGVSAISQIGKHILQNPTA 355

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-- 354
           +      +   V  +    ++      +      ++M L   + +S +D       +   
Sbjct: 356 LV----DYQATVLADTLPAIKHIQSDDKDALRRHVIMNLLCHDYMSFEDLHARFDIDAKE 411

Query: 355 ----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               +I+  +++Q  G ++  +        +G  +  S+
Sbjct: 412 YFANEIKNLQDMQTDGLVQIDEDGITIL-PKGRILGRSI 449


>gi|296113817|ref|YP_003627755.1| oxygen-independent coproporphyrinogen III oxidase [Moraxella
           catarrhalis RH4]
 gi|295921511|gb|ADG61862.1| oxygen-independent coproporphyrinogen III oxidase [Moraxella
           catarrhalis RH4]
          Length = 469

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 152/399 (38%), Gaps = 26/399 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  L +Y+H PFC   C YC  N  + +      +++     E++  + L   ++
Sbjct: 57  VNRNPAIPLSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKT 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  +  GGGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G
Sbjct: 117 WVKQLHLGGGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQ L+++    + R  +       +  A+   F   + DLIY LP QT     
Sbjct: 177 FNRLSFGVQDLDKKVQIAVNRVQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMN 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++ +  + D LS++         F +     +  LPS    + ++    +     G 
Sbjct: 237 ATIEQIIKLSPDRLSVFNYAHLPERFFAQKR-ILEADLPSPTDKLTMFGNIITSLGDAGY 295

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               I + +           +   + N+  Y      D +G G  A S++     +   +
Sbjct: 296 QYIGIDHFAKPDDAMAIAQRQGKLHRNFQGYAILGECDLLGFGVSAISQIGKHILQNPTA 355

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-- 354
           +      +   V  +    ++      +      ++M L   + +S +D       +   
Sbjct: 356 LV----DYQATVLADTLPAIKHIQSDDKDALRRHVIMNLLCHDYMSFEDLHARFDIDAKE 411

Query: 355 ----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               +I+  +++Q  G ++  +        +G  +  S+
Sbjct: 412 YFANEIKNLQDMQTDGLVQIDEDGITIL-PKGRILGRSI 449


>gi|28869197|ref|NP_791816.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28852437|gb|AAO55511.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 460

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 80/413 (19%), Positives = 156/413 (37%), Gaps = 32/413 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E++
Sbjct: 38  FELLHALRES--RKARRPLSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIR 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   
Sbjct: 96  MLACHLAPSQVVEQLHLGGGTPTFLSHDELRRLMARLRAHFTLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +  +    R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWASMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP  +  + + 
Sbjct: 216 YGLPRQTPQGFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDASDLPDAHTKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAH 283
             T    +  G     + + +    E        +LH  N+  Y      D IG+G  A 
Sbjct: 275 ERTVEQLTDAGYRYIGMDHFALPDDELAIAQEELTLHR-NFQGYTTHGHCDLIGLGVSAI 333

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S+V      +          + +++  +  A +     S + +    ++  L     ++ 
Sbjct: 334 SQVGD----LYSQNSSDLNDYQRLLDSDQPATLRGLICSEDDRIRRAVIQQLICHFTLNF 389

Query: 344 KDWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            + E     +              +   G I     S +     G  ++ SV 
Sbjct: 390 SELEKAFAISFRDYFADAWPQLLCMADDGLITLSD-SAIEVRPAGRLLVRSVC 441


>gi|217032238|ref|ZP_03437736.1| hypothetical protein HPB128_2g40 [Helicobacter pylori B128]
 gi|298735755|ref|YP_003728280.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
 gi|216946109|gb|EEC24720.1| hypothetical protein HPB128_2g40 [Helicobacter pylori B128]
 gi|298354944|emb|CBI65816.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
          Length = 345

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 156/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYIQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHARLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +    +  N+ +          YE+SN++  G
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCTNFDNVIKEALEGFSFKQYEVSNYAR-G 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKRLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           L+ + +  E L +GLR   G+ +   + 
Sbjct: 283 LNKQDKRLEKLFLGLRCVLGVELSLLDE 310


>gi|326564474|gb|EGE14700.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 46P47B1]
 gi|326568386|gb|EGE18466.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC7]
 gi|326574301|gb|EGE24248.1| coproporphyrinogen III oxidase [Moraxella catarrhalis O35E]
 gi|326574885|gb|EGE24815.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 101P30B1]
 gi|326576209|gb|EGE26124.1| coproporphyrinogen III oxidase [Moraxella catarrhalis CO72]
          Length = 469

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 152/399 (38%), Gaps = 26/399 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  L +Y+H PFC   C YC  N  + +      +++     E++  + L   ++
Sbjct: 57  VNRNPAIPLSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKT 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  +  GGGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G
Sbjct: 117 WVKQLHLGGGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQ L+++    + R  +       +  A+   F   + DLIY LP QT     
Sbjct: 177 FNRLSFGVQDLDKKVQIAVNRVQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMN 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++ +  + D LS++         F +     +  LPS    + ++    +     G 
Sbjct: 237 ATIEQIIKLSPDRLSVFNYAHLPERFFAQKR-ILEADLPSPTDKLTMFGNIITSLGDAGY 295

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               I + +           +   + N+  Y      D +G G  A S++     +   +
Sbjct: 296 QYIGIDHFAKPDDAMAIAQRQGKLHRNFQGYAILGECDLLGFGVSAISQIGKHILQNPTA 355

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-- 354
           +      +   V  +    ++      +      ++M L   + +S +D       +   
Sbjct: 356 LV----DYQATVLADTLPAIKHIQSDDKDALRRHVIMNLLCHDYMSFEDLHARFDIDAKE 411

Query: 355 ----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               +I+  +++Q  G ++  +        +G  +  S+
Sbjct: 412 YFANEIKNLQDMQTDGLVQIDEDGITIL-PKGRILGRSI 449


>gi|308064005|gb|ADO05892.1| coproporphyrinogen III oxidase [Helicobacter pylori Sat464]
          Length = 345

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 166/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYRNARLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N  + I        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNAIKEILEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    + L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVEISF--------LDENKVKFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|86133678|ref|ZP_01052260.1| oxygen-independent coproporphyrinogen III oxidase [Polaribacter sp.
           MED152]
 gi|85820541|gb|EAQ41688.1| oxygen-independent coproporphyrinogen III oxidase [Polaribacter sp.
           MED152]
          Length = 453

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 156/409 (38%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENN-MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K++ +++ + +       + +Y+H PFC   C +C  + H+ +    +E +I++ + E Q
Sbjct: 33  KWIKSFQQSFIESNQKEGISLYIHLPFCESLCTFCACHKHITKRHEVEEEYIKTVINEWQ 92

Query: 61  WMRQLTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
               LT    I   +  GGGTP+    +N+  ++ GI KN    +N E + E +PS+   
Sbjct: 93  LYVNLTDETPIIKELHLGGGTPTFFSKENLEYLIQGIFKNAKKHNNAEFSFEGHPSNTTK 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
              Q     G  R+S GVQ   +   + + R     E       AR I    +S DLI+ 
Sbjct: 153 EQLQTLFNCGFTRVSFGVQDYNQNVQKAINRIQTFKEVQQVTDWAREIGYTSISHDLIFG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT       + +      D +S Y                 +  LP +    +LY +
Sbjct: 213 LPHQTKENVIYTINKTKELKPDRISFYSYAHVPWVKGVGQRGFNENDLPKDEEKRELYEI 272

Query: 239 TQSITSAHGLHAYEISNHS-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRV 286
            + + +  G     + + +           E+  + N+  Y        IG+G  A S  
Sbjct: 273 GKKLFADLGYEEIGMDHFALKSDSLYKATLENTLHRNFMGYTSNKTQLMIGLGMSAISDS 332

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +   ++    + + K+V      V     L+ E Q     ++ L      S  D 
Sbjct: 333 WYGFSQNVKTV----KEYQKIVNLGEIPVFRGHILTKEDQIIRKHILNLMCNFSTSW-DL 387

Query: 347 EMLAGRNLDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + +   N+D        L +   + +++ + +   ++    + +V    
Sbjct: 388 DQMKISNVDNHLHELEELIKDDLV-QLKGNTIYIPEKARPFVRNVCMAF 435


>gi|326566225|gb|EGE16377.1| coproporphyrinogen III oxidase [Moraxella catarrhalis 103P14B1]
          Length = 469

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 151/398 (37%), Gaps = 26/398 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
               +  L +Y+H PFC   C YC  N  + +      +++     E++  + L   ++ 
Sbjct: 58  NRNPAIPLSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKTW 117

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  +  GGGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G 
Sbjct: 118 VKQLHLGGGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLGF 177

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S GVQ L+++    + R  +       +  A+   F   + DLIY LP QT      
Sbjct: 178 NRLSFGVQDLDKKVQIAVNRVQSLELIQNVMQEAQALGFGSTNIDLIYGLPHQTPASMNA 237

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +++ +  + D LS++         F +     +  LPS    + ++    +     G  
Sbjct: 238 TIEQIIKLSPDRLSVFNYAHLPERFFAQKR-ILEADLPSPTDKLTMFGNIITSLGNAGYQ 296

Query: 250 AYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              I + +           +   + N+  Y      D +G G  A S++     +   ++
Sbjct: 297 YIGIDHFAKPDDAMAIAQRQGKLHRNFQGYAILGKCDLLGFGVSAISQIGKHILQNPTAL 356

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--- 354
                 +   V  +    ++      +      ++M L   + +S +D       +    
Sbjct: 357 V----DYQATVLADTLPAIKHIQSDDKDALRRHVIMNLLCHDYMSFEDLHARFDIDAKEY 412

Query: 355 ---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              +I+  +++Q  G ++  +        +G  +  S+
Sbjct: 413 FANEIKNLQDMQTDGLVQIDEDGITIL-PKGRILGRSI 449


>gi|325103125|ref|YP_004272779.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
 gi|324971973|gb|ADY50957.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           saltans DSM 12145]
          Length = 453

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 173/409 (42%), Gaps = 24/409 (5%)

Query: 2   KYLSAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K++++   + T     S + +Y+H PFC   C YC  N+ + +    +  +I + + E +
Sbjct: 35  KWINSVRESFTASNKESGISLYIHLPFCENLCTYCGCNTRITKNHSVEIPYINAVIREWE 94

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
             +        +  +  GGGTP+    +N+ L+++GI  N  + SN E + EA+P++   
Sbjct: 95  LYKLNFDEKPIVKELHLGGGTPTFFSSENLNLLINGILTNCELHSNAEFSFEAHPANTTE 154

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + +   K G  R+SLG+Q  +++  + + R  +  +     + AR I    +++DLIY 
Sbjct: 155 QHLETLYKLGFKRLSLGIQDFDKEVQKVINRMQSYEQVEYVTNTARKIGYTSINYDLIYG 214

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q ++     + +      D ++ Y        +        +L LP      +LY  
Sbjct: 215 LPLQKLSGLIQTITQVNQLRPDRIAFYSYAHVP-WIKPGQRMFTELDLPDTEAKQELYET 273

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHN--------LNYWRYGD-----YIGIGPGAHSR 285
            + +    G     + + + L ++SL N         N+  Y        IG+G  + S 
Sbjct: 274 GRKLFIEAGYEEVGMDHFA-LKSDSLFNAQENKTLHRNFMGYTHQYTELMIGLGVSSIS- 331

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
               +        K  E + +++ ++   V +   L SE       ++ +      +  D
Sbjct: 332 ---DTWNAFAQNVKTVEEYKQLIAEDTIPVFKGHLLDSEDLLMRKHILNIMCHGETTWND 388

Query: 346 WEMLAGR-NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++L    +L  +    + + G +E+  ++ L+ T+RG   L ++ A  
Sbjct: 389 IDLLNDSFSLAFDNLEEVVKDGLVEKHDYT-LKVTKRGTRFLRNICAAF 436


>gi|188528013|ref|YP_001910700.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
 gi|188144253|gb|ACD48670.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
          Length = 345

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYRNACLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N+ + +        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNIIKEVLEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    + L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVELSF--------LDENKVKFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|222824130|ref|YP_002575704.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           lari RM2100]
 gi|222539352|gb|ACM64453.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           lari RM2100]
          Length = 451

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 157/390 (40%), Gaps = 25/390 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           L +Y H PFC   C +C  N      +  +E ++     E++ +  +    R ++ + FG
Sbjct: 46  LSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLSYLFKELELLANIINTQREVAQMHFG 105

Query: 78  GGTPSLIEPQNIALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+    + +  + L         + + EI+ E +P  +           G NRIS G
Sbjct: 106 GGTPTFFSAKQLQKLILKIKNIFPNFTQDSEISCEIDPRFLNEEQADVLISNGFNRISFG 165

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ  +E+  + + R         A+ + R      ++ DLIY LP Q++  ++  L++AL
Sbjct: 166 VQDFDEKVQKEIHRIQPFELTKNAVDMVRKKGIKSVNMDLIYGLPYQSLESFKQTLEKAL 225

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D  +++        L   M K  +  LPS +V + +    +   + +G     + +
Sbjct: 226 LINPDRFAIFNYAHVP-WLKKNMRKFDESTLPSPDVKLQILEYCEIFLTQNGYKMIGMDH 284

Query: 256 HSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
            +    E        SLH  N+  Y      D IGIG  +         R  +   K   
Sbjct: 285 FAKPQDELFKALENGSLHR-NFQGYTTKGGTDLIGIGLTSIG----EGQRHYMQNFKDMP 339

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           S+ K + +      +   L  + +  + ++M L     +++K+ E     +     +++L
Sbjct: 340 SYEKAIDEGRLPCEKGIMLDDDDELRKAVIMELMSNFALNIKNIENKFKIDFFEYFKQDL 399

Query: 363 QRQGFIER---VQFSRLRCTQRGMTMLDSV 389
           +    +     +  + ++  + G+ ++ ++
Sbjct: 400 KELEELSEFVAIDENYIKVNETGVLLIRNI 429


>gi|108758201|ref|YP_633675.1| coproporphyrinogen III oxidase [Myxococcus xanthus DK 1622]
 gi|108462081|gb|ABF87266.1| oxygen-independent coproporphyrinogen III oxidase [Myxococcus
           xanthus DK 1622]
          Length = 457

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 88/398 (22%), Positives = 159/398 (39%), Gaps = 23/398 (5%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
            E+  + + +  L +YVH PFC   C YC  N  + R +   + +I     E+  + Q  
Sbjct: 48  LEHAGSREHAEPLSLYVHLPFCRSLCWYCGCNVVISRDRAAADQYIDHLEMELDLVVQRL 107

Query: 67  G-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           G  RS+S I +GGGTP+ ++ + +  +   + + + ++S+ E+ IE +P+          
Sbjct: 108 GCRRSLSQIHWGGGTPTFLDERQLERLWTALTRRFRIASDAEVAIEIHPAVTTPGQLTLL 167

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTM 184
           R  G NR+S+G+Q  + +      R  +  E  A +  AR   F  ++FDLIY LP Q  
Sbjct: 168 RSLGFNRVSMGLQDFDARVQEVTNRIQSPEETRALLEHARLLGFKGVNFDLIYGLPHQDA 227

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   L   LS   D L++Y        +     +     +PS    ++L+    +   
Sbjct: 228 EGWARTLDTVLSMRPDRLAVYSFAFMPE-VLKHQRRMPAEAIPSGRAKLELFRSAYAAFV 286

Query: 245 AHGLHAYEISNH-------SFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHR 292
           + G     + +        +   AE     N+  Y      D + IG    S V     +
Sbjct: 287 SAGYRPIGMDHFAVPEDELARAQAERRLGRNFQGYTVKAASDVVAIGSTGISDVDGAYAQ 346

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV-KDWEMLAG 351
              ++ +    + + V +   A      L+++ Q    ++  L     + +  D      
Sbjct: 347 NVRALPR----YYERVSQGCLATERGLSLTADDQRRRAVITRLMCNFWVDLGADGADYFA 402

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             L  E  R  +  G + R   S+L  T  G   + +V
Sbjct: 403 PEL--ERLRAFEADGLVMRT-GSQLELTPMGRLFVRNV 437


>gi|326572287|gb|EGE22282.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC8]
          Length = 469

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 152/399 (38%), Gaps = 26/399 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +    +  L +Y+H PFC   C YC  N  + +      +++     E++  + L   ++
Sbjct: 57  VNRNPAIPLSLYIHIPFCHHLCYYCGCNKIITKKNSDAGDYLTYLFAEIRHKKSLLRGKT 116

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +  +  GGGTP+ +    +  + D + + +  +   + +IE +P  +  N  +  +  G
Sbjct: 117 WVKQLHLGGGTPTFLSDDELITLWDFLHEEFLFADEGDFSIEIDPRELRPNTLKILKDLG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQ L+++    + R  +       +  A+   F   + DLIY LP QT     
Sbjct: 177 FNRLSFGVQDLDKKVQIAVNRVQSLELIQNVMQEAQALGFSSTNIDLIYGLPHQTPASMN 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++ +  + D LS++         F +     +  LPS    + ++    +     G 
Sbjct: 237 ATIEQIIKLSPDRLSVFNYAHLPERFFAQKR-ILEADLPSPTDKLTMFGNIITSLGDAGY 295

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
               I + +           +   + N+  Y      D +G G  A S++     +   +
Sbjct: 296 QYIGIDHFAKPDDAMAIAQRQGKLHRNFQGYAILGECDLLGFGVSAISQIGKHILQNLTA 355

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-- 354
           +      +   V  +    ++      +      ++M L   + +S +D       +   
Sbjct: 356 LV----DYQATVLADTLPAIKHIQSDDKDALRRHVIMNLLCHDYMSFEDLHARFDIDAKE 411

Query: 355 ----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               +I+  +++Q  G ++  +        +G  +  S+
Sbjct: 412 YFANEIKNLQDMQTDGLVQIDEDGITIL-PKGRILGRSI 449


>gi|197121559|ref|YP_002133510.1| coproporphyrinogen III oxidase [Anaeromyxobacter sp. K]
 gi|196171408|gb|ACG72381.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. K]
          Length = 458

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 85/401 (21%), Positives = 160/401 (39%), Gaps = 27/401 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGP 68
               Q    L +YVH PFC + C +C  N      +   + ++     E+  +  +L   
Sbjct: 43  ARANQQGGPLSIYVHLPFCREMCRFCGCNVVATHDRTRADAYLDVLEKEVALVAAKLPDR 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+ S + +GGGTP+ ++ + +    D +A+++T +S+VE  IE +P+    +  +   K 
Sbjct: 103 RAASQLHWGGGTPTFLDEKQLVRCHDILARHFTFTSDVEKAIEIDPAITTRSQIEVLAKL 162

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ  + +    +GR     E    +  AR N F  ++ DLIY LP QT   W
Sbjct: 163 GFNRISMGVQDFDARVQEVVGRIQGEKETADLVQAARDNGFKGVNLDLIYGLPYQTPDTW 222

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L+R L+   D ++++       +  ++     +  LP     V+L+       +  G
Sbjct: 223 KKTLERILAIHPDRMAVFGFAYVPWSKPHQRLLPQEA-LPKTEQRVELFLSAVEAFTGAG 281

Query: 248 LHAYEISNHS-----FLGAESLHNL--NYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +        A+S   L  N+  Y      D +  G  + S +     + A 
Sbjct: 282 YRLIGLDHFALESDELAVAQSGGYLYRNFQGYTVRPAEDTVAFGMTSISDIGGAYAQNAH 341

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                 + W   V      V     +S++     F +  +     + +++     G    
Sbjct: 342 K----LKDWEAKVEAGIIPVDRGASMSADDVMRRFTINRVMCLLRLDLREIAEKFGPEGR 397

Query: 356 IECE-------RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              E       + L+  G +       L+ T  G  ++ +V
Sbjct: 398 AAIEADLRAGVKELEEDGLVT-FDGDVLKVTPLGQLLVRNV 437


>gi|154174680|ref|YP_001408658.1| coproporphyrinogen III oxidase [Campylobacter curvus 525.92]
 gi|112803898|gb|EAU01242.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           curvus 525.92]
          Length = 453

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 86/396 (21%), Positives = 156/396 (39%), Gaps = 29/396 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y++  +N      S  L +Y+H PFC   C +C  N         +E +I     E++ 
Sbjct: 34  DYVNELKNR---DKSRPLSLYLHLPFCRSACYFCGCNVIYTSKDDRKERYIGYLEKELEI 90

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEV 119
           +   L     +  + FGGGTP+  +   +  I+    AK      N E++ E +P  +  
Sbjct: 91  LSTHLDTSVPVLQMHFGGGTPTFYDATQLDRIIRLIKAKFQNFLPNAEVSCEIDPRFLNE 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
                    G NR+S GVQ  +E+  + + R         A++LAR      ++ DLIY 
Sbjct: 151 AQLDVLVSHGFNRVSYGVQDFDEKVQKEIHRIQPYEITQNAVNLARKKGINSVNMDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q++  ++  L+ AL+   D L+++        +   M K  +  LPS  V +++   
Sbjct: 211 LPYQSLDSFKHTLELALTLDPDRLAIFNYAHVP-WIKKSMRKFDETTLPSPQVKLEILKY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T    + +G     + + +    E        +LH  N+  Y      D IGIG  +   
Sbjct: 270 TAEFLTKNGYKMIGMDHFAKPNDELFAALANGTLHR-NFQGYTTKGGADLIGIGVTSIGE 328

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
            K    R      K  + +   +        +  +LS E    + ++M L     + +K 
Sbjct: 329 CK----RHYAQNFKDMDQYEAALDSGILPYAKGIYLSDEDLLRKTVIMSLMSNFTLDIKA 384

Query: 346 WEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQR 381
            E   G       +  L++   +E ++   ++ T  
Sbjct: 385 VEAEFGVKFFEHFKGELKQ---LEELK-DFVKITPE 416


>gi|227537949|ref|ZP_03967998.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227242188|gb|EEI92203.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 454

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 84/408 (20%), Positives = 166/408 (40%), Gaps = 25/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++    +       +N + +Y+H PFC   C YC  N+ + +    ++ +I + L E   
Sbjct: 38  EWEERVKQTYASSTANGVSIYIHLPFCEDLCTYCGCNTRITKNHKVEDPYITAVLKEWAM 97

Query: 62  MRQLTGP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +Q+ G     IS I  GGGTP+  +P N+  ++ GI    T + +   + EA+P++   
Sbjct: 98  YKQILGDTAVKISEIHLGGGTPTFFQPANLERLITGILDGNTCAEDASFSFEAHPANTTD 157

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
           ++ +     G  R+SLG+Q  + +    + R     +    +  AR I    ++FDLIY 
Sbjct: 158 SHLETLYNLGFRRLSLGIQDFDAKVQFVINRLQTVEDVERVVAQARAIGYTSINFDLIYG 217

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT +     + +AL    D +S Y        +     +  ++ LP     + LY L
Sbjct: 218 LPFQTESTITETIDKALEMRPDRISFYSYAHVP-WIKPGQRRFTEMDLPEGENKLSLYKL 276

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYGD-----YIGIGPGAHSRV 286
            + +    G     + + +    E          + N+  Y D      IG+G  + S  
Sbjct: 277 GKQMIGQEGYEDVGMDHFARPDDELFLASRAGRLHRNFMGYADRYTPLMIGLGVSSISDA 336

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +   ++    E + +++ +    VV+   L+ E +     ++ +  R  +   ++
Sbjct: 337 WTGFAQNVKTV----EEYHRLITEGKLPVVKGHLLTEEDEILRRYILHMMCRGEM---EF 389

Query: 347 EMLAGRNLDI-ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E     N  I E    +   G +     + +  T+ G + L ++    
Sbjct: 390 ERGFRLNAKIKERLEPMFLDGLLTMGADN-VCITETGKSFLRNICMAF 436


>gi|312890867|ref|ZP_07750396.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
 gi|311296650|gb|EFQ73790.1| oxygen-independent coproporphyrinogen III oxidase [Mucilaginibacter
           paludis DSM 18603]
          Length = 454

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 85/395 (21%), Positives = 160/395 (40%), Gaps = 23/395 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SS 73
           G++ L +Y+H PFC   C YC  N+ + +    +  +I + LTE     Q+   + +   
Sbjct: 49  GTDGLSLYIHLPFCESLCTYCGCNTRITKNHTVEIPYIDAVLTEWAMYLQMMDEKPVIRE 108

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+     N+  ++ G+ K+  V    E + EA+P++   ++ Q   + G  R+
Sbjct: 109 IHLGGGTPTFFSADNLNDLIKGLLKDSVVHPRAEFSFEAHPANTSFDHLQTLYELGFTRL 168

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+Q  + +    + R+ +  +  A    AR I    +++DLIY LP QT+      L+
Sbjct: 169 SLGIQDFDPKVQFIINRDQSVEQVTAITQQARQIGYTSINYDLIYGLPLQTVEGLINTLE 228

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  D ++ Y        +     +  +  LP+      L+ +  S+  ++G H   
Sbjct: 229 IVSKLMPDRIAFYSYAHVP-WIKPGQRRFTEQDLPNAEAKTRLHKIGVSLFKSYGYHEIG 287

Query: 253 ISNHSFLGAE--------SLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +    E        +LH  N+  Y        IG+G  + S     S+       K
Sbjct: 288 MDHFALPDDELFMAEKSGNLHR-NFMGYTQQHTRLLIGLGVSSIS----DSYNAFAQNVK 342

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IEC 358
             E +L++V      V +   L+ +       ++ +  +         + +    + I+ 
Sbjct: 343 TVEEYLQLVNSGKLPVFKGHLLTDDDLIIRQHILDIMCKGHTEWHHLAVPSHAVAEGIQR 402

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            + L   G IE      L  T  G   L ++   L
Sbjct: 403 LQVLANDGLIELSPGG-LTVTPLGKGFLRNICMAL 436


>gi|220916323|ref|YP_002491627.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954177|gb|ACL64561.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 458

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 84/401 (20%), Positives = 159/401 (39%), Gaps = 27/401 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGP 68
               Q    L +YVH PFC + C +C  N      +   + ++     E+  +  +L   
Sbjct: 43  ARANQQGGPLSIYVHLPFCREMCRFCGCNVVATHDRTRADAYLDVLEKEVALVAAKLPDR 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+ S + +GGGTP+ ++ + +    D +A+++T +S+ E  IE +P+    +  +   K 
Sbjct: 103 RAASQLHWGGGTPTFLDEKQLVRCHDILARHFTFTSDAEKAIEIDPAITTRSQIEVLAKL 162

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ  + +    +GR     E    +  AR N F  ++ DLIY LP QT   W
Sbjct: 163 GFNRISMGVQDFDARVQEVVGRIQGEKETADLVQAARDNGFKGVNLDLIYGLPYQTPDTW 222

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L+R L+   D ++++       +  ++     +  LP     V+L+       +  G
Sbjct: 223 KKTLERILAIHPDRMAVFGFAYVPWSKPHQRLLPQEA-LPKTEQRVELFLSAVEAFTGAG 281

Query: 248 LHAYEISNHS-----FLGAESLHNL--NYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +        A+S   L  N+  Y      D +  G  + S +     + A 
Sbjct: 282 YRLIGLDHFALESDELAVAQSGGYLYRNFQGYTVRPAEDTVAFGMTSISDIGGAYAQNAH 341

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                 + W   V      V     +S++     F +  +     + +++     G    
Sbjct: 342 K----LKDWEAKVEAGIIPVDRGASMSADDVMRRFTINRVMCLLRLDLREIAEKFGPEGR 397

Query: 356 IECE-------RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              E       + L+  G +       L+ T  G  ++ +V
Sbjct: 398 AAIEADLRAGVKELEEDGLVT-FDGDVLKVTPLGQLLVRNV 437


>gi|317180951|dbj|BAJ58737.1| coproporphyrinogen III oxidase [Helicobacter pylori F32]
          Length = 345

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 155/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKSFERIFESIYHNASLSKDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +       N+ + +        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTHFDNIIKEVLEGFFFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           LS + +  E L +GLR   G+ +   + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVEISFLDE 310


>gi|300022107|ref|YP_003754718.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523928|gb|ADJ22397.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 450

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 81/398 (20%), Positives = 153/398 (38%), Gaps = 36/398 (9%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +LSA          + + +Y+H P+C   C YC  N+ +        N++     E++ +
Sbjct: 38  WLSAL------APRDPVSLYLHIPYCRSMCWYCGCNTTISARDEPVANYLDVLHREIEMV 91

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               G R  +  + FGGGTP++++P     ++  +   + +  + E+ IE +P ++    
Sbjct: 92  ASQIGRRQRVKYVHFGGGTPTIMKPAQFIGLVHLLRDAFDIVDDAELAIEIDPRTISREM 151

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
               R +G+NR S+GVQ+ + +  + + R  +       +   R I   R++FDLIY LP
Sbjct: 152 LAAMRGSGINRASIGVQTFDPKVQQSINRIQSVECTSQTVAALRRIGINRINFDLIYGLP 211

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+      ++ AL+   D L+++          ++   D    LP     V+      
Sbjct: 212 NQTVQSCIETVKTALTMKPDRLAVFGYAHVPDVKKHQRLIDVK-TLPDSAERVEQTVAIA 270

Query: 241 SITSAHGLHAYEISNHSFLG-----AESLHNL--NYWRYGD-----YIGIGPGAHSRVKV 288
                 G     +   +        A++ H L  N+  Y        IG G  A  + K 
Sbjct: 271 DALVNAGYKQIGLDCFALPDDELGVAQASHRLRRNFQGYTSDDCEALIGFGASAIGKTKQ 330

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G  +   +I     ++   VR    A  +   L+SE +    ++  L       +     
Sbjct: 331 GYVQNETAI----GNYSTRVRDGRLATAKGYSLTSEDRGRAAIIERLMCDFEADLPGICS 386

Query: 349 LAGRN----------LDIECERNLQR-QGFIERVQFSR 375
             G +          L    +  L +  G I R++   
Sbjct: 387 RYGLDHAALTGGNERLSRAIDEGLAQMDGNILRIENDH 424


>gi|254431726|ref|ZP_05045429.1| oxygen-independent coproporphyrinogen III oxidase [Cyanobium sp.
           PCC 7001]
 gi|197626179|gb|EDY38738.1| oxygen-independent coproporphyrinogen III oxidase [Cyanobium sp.
           PCC 7001]
          Length = 452

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 167/406 (41%), Gaps = 28/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWM- 62
           +A    +    +  L +YVH PFC   C YC  N    +      E ++ S   E++ + 
Sbjct: 40  AALREQLAQPTTAPLSLYVHVPFCRHACWYCGCNRITTQLGSRVVEPYLASLARELELIT 99

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             +   R ++ + +GGGTP+ + PQ  + +   IA+++ +++++E +IE NP  +  +  
Sbjct: 100 AAMPQRRRLAQLHWGGGTPNYLNPQETSRLWQLIARHFDLAADLEASIEVNPEFLSRDGV 159

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R+ G NR+S G+Q  + +  + + R     +    +   R   F  ++ DLI  LP 
Sbjct: 160 LQLRQLGFNRLSFGIQDADPEVQKAVNRVVPPEQLRRVMGWLREADFASVNVDLICGLPL 219

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT  ++   L+   +   D +SL+              +     LPS++  + +  L Q 
Sbjct: 220 QTPERFRHTLELVEALHPDRVSLFSFAYLPD-QLPLQRRIAAADLPSQHARITMLELAQE 278

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVG 289
           +  A G  A  + +++  G        E   + N+  Y      + +G+GP A S+    
Sbjct: 279 LLCARGYEAIGMDHYALAGDSLAAAAREGRLHRNFQGYTTGGELELLGVGPTAISQFP-- 336

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF-LMMGLRLREGISVKDWEM 348
              +    ++  ++W   + +    V     +   Q  +   L+  +     + +     
Sbjct: 337 --HLFCQNQRDLKAWATDLEQGRLPVERGLVVRDPQVLERRELIRQVMCSFALELD---- 390

Query: 349 LAGRNLDIECERNLQRQGFIE---RVQFSRLRCTQRGMTMLDSVIA 391
           L     +    + L   G ++     +  R++ T+ G  ++ +V +
Sbjct: 391 LTRFEPEWRRLQELAADGLVQLQRTGERGRVQVTREGRWLIRTVAS 436


>gi|118474291|ref|YP_892704.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413517|gb|ABK81937.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 453

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 160/407 (39%), Gaps = 28/407 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   +N   G  +  L +Y H PFC   C +C  N            ++     E++ 
Sbjct: 34  EYIKRLKN---GDKNRKLSLYFHLPFCRSACYFCGCNVIYTSKSDKMSRYLDYLSKELEI 90

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEV 119
           + + L   R ++ + FGGGTP+      +  ++  I K++     + EI+ E +P  +  
Sbjct: 91  LSEVLDTKRQVTQMHFGGGTPTFYSADELDRLIKEIKKHFKNWIDDAEISCEIDPRFLNE 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
           +        G NR+S GVQ  +E+    + R         A+ +AR      ++ DLIY 
Sbjct: 151 DQLDVLVGHGFNRVSFGVQDFDEKVQTEIHRIQPFEMTKNAVDMARSKGITSINTDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q++  ++  L+  +S   D  +++        +   M K  +  LP+  + +++   
Sbjct: 211 LPYQSLESFKKTLELGVSLNPDRFAVFNYAHVP-WIKKSMRKFDEATLPNPKIKLEILKY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T    +++G     + +++    E        SLH  N+  Y      D IGIG  +   
Sbjct: 270 TMEFLTSNGYKMIGMDHYAKEDDELFKALENGSLHR-NFQGYTTKGGADLIGIGLTSIGE 328

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                        K   S+ K +  N     +   L++E +  + ++M L     + +K 
Sbjct: 329 GDD----YYAQNYKDMVSYEKAIDDNKLPNSKGVLLNNEDKLRKAVIMDLMANFALDIKK 384

Query: 346 WEMLAGRNLDIECERNLQRQGFIE---RVQFSRLRCTQRGMTMLDSV 389
            E           +  L     ++    +   +++  + G  ++ ++
Sbjct: 385 IESKFNIKFFEHFKNELNDLEELKDFVEISNDKIKINETGTLLIRNI 431


>gi|300772583|ref|ZP_07082453.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300760886|gb|EFK57712.1| possible coproporphyrinogen dehydrogenase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 454

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 85/408 (20%), Positives = 166/408 (40%), Gaps = 25/408 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++    +        N + +Y+H PFC   C YC  N+ + +    ++ +I + L E   
Sbjct: 38  EWEERVKQTYASSTGNGVSIYIHLPFCEDLCTYCGCNTRITKNHKVEDPYITAVLKEWAM 97

Query: 62  MRQLTGP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +QL       IS I  GGGTP+  +P N+  ++ GI    T + +   + EA+P++   
Sbjct: 98  YKQLLEDTAVKISEIHLGGGTPTFFQPANLERLITGILDGNTCAEDASFSFEAHPANTTE 157

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
           ++ +   + G  R+SLG+Q  + +    + R     +    +  AR I    ++FDLIY 
Sbjct: 158 SHLKTLYRLGFRRLSLGIQDFDAKVQFVINRLQTVEDVERVVAQARAIGYTSINFDLIYG 217

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT +     + +AL    D +S Y        +     +  ++ LP     + LY L
Sbjct: 218 LPFQTESTITETIDKALEMQPDRISFYSYAHVP-WIKPGQRRFTEMDLPEGESKLRLYKL 276

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYGD-----YIGIGPGAHSRV 286
            + +    G     + + +    E          + N+  Y D      IG+G  + S  
Sbjct: 277 GKQMIGQEGYEDVGMDHFARPDDELFLASRAGRLHRNFMGYADRYTPLMIGLGVSSISDA 336

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +   ++    E + +++ +    VV+   L+ E +     ++ +  R  +   ++
Sbjct: 337 WTGFAQNVKTV----EEYHRLIAEGKLPVVKGHLLTGEDEILRRYILHMMCRGEM---EF 389

Query: 347 EMLAGRNLDI-ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E     N  I E    +   G +     + +R T+ G + L ++    
Sbjct: 390 ERGFRLNTKIKERLEPMFLDGLLTMGADN-VRITETGKSFLRNICMAF 436


>gi|291059593|gb|ADD72328.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema pallidum subsp. pallidum str. Chicago]
          Length = 405

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 120/394 (30%), Positives = 177/394 (44%), Gaps = 37/394 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +YVH PFC ++C YCDF S VR    R      +FI   L ++   R+  G +   +++
Sbjct: 20  SLYVHIPFCAQRCAYCDFYSLVRSTYFRPHQPCPHFIDRLLQDVALQRECFGVQGWQTVY 79

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ+I      +          E T+E NP  V         + GVNR+SL
Sbjct: 80  MGGGTPSLLAPQDIRHFCVALRAAQRY-PIQEFTLEVNPEDVTEEFLCACAEGGVNRLSL 138

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH------LARNIFPRMSFDLIYALPKQTMTQWEM 189
           GVQSL ++ LR   R  +A  A  A+          +   R+S DLI  L  QT      
Sbjct: 139 GVQSLRDEVLRAERRAASAECARTALRVMTANARFFSGGVRISADLIAGLRGQTARMVRE 198

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++   LS+ + H+SLY L +   T               E     L+    +     G +
Sbjct: 199 DIDELLSFGLRHVSLYGLCVPHPTE------------TQEERIAALWAHGSAYLVRAGFN 246

Query: 250 AYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAH-------SRVKVGSHRVAISIEKHP 301
            YE+SN +   A ES HN  YWR   + G+GPGA        S  K G+  +  ++ KH 
Sbjct: 247 RYELSNFARTAADESAHNRAYWRMAPHAGVGPGAVGTRFVNLSLSKEGAWAIRSTVRKHL 306

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +L  V +    V E EFL+      E L+MGLRL +G+ V  +    G+ ++    + 
Sbjct: 307 GQYLAEVCREN--VYEHEFLTEHMCVQEALLMGLRLEQGLDVVTFRARFGKGIEAYIGKT 364

Query: 362 LQR---QGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           + R    G ++R   S LR + +    LDS +  
Sbjct: 365 IARWQCHGRMQRTATS-LRLSAQARVFLDSFLRE 397


>gi|15639179|ref|NP_218625.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189025419|ref|YP_001933191.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           pallidum subsp. pallidum SS14]
 gi|3322450|gb|AAC65171.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017994|gb|ACD70612.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Treponema pallidum subsp. pallidum SS14]
          Length = 393

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 120/394 (30%), Positives = 177/394 (44%), Gaps = 37/394 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +YVH PFC ++C YCDF S VR    R      +FI   L ++   R+  G +   +++
Sbjct: 8   SLYVHIPFCAQRCAYCDFYSLVRSTYFRPHQPCPHFIDRLLQDVALQRECFGVQGWQTVY 67

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ+I      +          E T+E NP  V         + GVNR+SL
Sbjct: 68  MGGGTPSLLAPQDIRHFCVALRAAQRY-PIQEFTLEVNPEDVTEEFLCACAEGGVNRLSL 126

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH------LARNIFPRMSFDLIYALPKQTMTQWEM 189
           GVQSL ++ LR   R  +A  A  A+          +   R+S DLI  L  QT      
Sbjct: 127 GVQSLRDEVLRAERRAASAECARTALRVMTANARFFSGGVRISADLIAGLRGQTARMVRE 186

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           ++   LS+ + H+SLY L +   T               E     L+    +     G +
Sbjct: 187 DIDELLSFGLRHVSLYGLCVPHPTE------------TQEERIAALWAHGSAYLVRAGFN 234

Query: 250 AYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAH-------SRVKVGSHRVAISIEKHP 301
            YE+SN +   A ES HN  YWR   + G+GPGA        S  K G+  +  ++ KH 
Sbjct: 235 RYELSNFARTAADESAHNRAYWRMAPHAGVGPGAVGTRFVNLSLSKEGAWAIRSTVRKHL 294

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +L  V +    V E EFL+      E L+MGLRL +G+ V  +    G+ ++    + 
Sbjct: 295 GQYLAEVCREN--VYEHEFLTEHMCVQEALLMGLRLEQGLDVVTFRARFGKGIEAYIGKT 352

Query: 362 LQR---QGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           + R    G ++R   S LR + +    LDS +  
Sbjct: 353 IARWQCHGRMQRTATS-LRLSAQARVFLDSFLRE 385


>gi|308183331|ref|YP_003927458.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
 gi|308065516|gb|ADO07408.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
          Length = 345

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEKYTQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYHNARLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P    T  + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNETSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N  + +        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNAIKEVLEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKFIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD +  + L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVEL--------IFLDEKKVKFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|315587116|gb|ADU41497.1| possible coproporphyrinogen dehydrogenase [Helicobacter pylori 35A]
          Length = 350

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 165/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T   SI S+F GGGT
Sbjct: 8   LYIHIPFCENKCGYCAFNSYEDKHGL-KEEYTQALCLDLKHALSQT-DESIESVFIGGGT 65

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 66  PNTLSVESFERIFESIYHNASLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 125

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 126 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 185

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +       N+ + +        YE+SN++   
Sbjct: 186 HLSAYALSIEKNTNLEK--------NAKKPSCTHFDNIIKEVLEGFSFKQYEVSNYAR-N 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 237 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 287

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +  +         IE  +   +          RL  + 
Sbjct: 288 LSEQDKHLEKLFLGLRCVLGVEIS-FLDKNKVRFLIEENKAFIK--------NDRLVASD 338

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 339 --FFMADE 344


>gi|153869392|ref|ZP_01999013.1| oxygen-independent coproporphyrinogen III oxidase HemN [Beggiatoa
           sp. PS]
 gi|152074090|gb|EDN70985.1| oxygen-independent coproporphyrinogen III oxidase HemN [Beggiatoa
           sp. PS]
          Length = 460

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 82/396 (20%), Positives = 152/396 (38%), Gaps = 28/396 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIF 75
             L +YVH PFC   C YC  N    + +     ++     E+ +   L    R ++ + 
Sbjct: 52  KPLSLYVHIPFCDTVCFYCGCNKVATKNRQLATPYLTHLHQELAFQSALFDRERPVTQLH 111

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +GGGTP+ +    +  ++ GI  ++ +    + E +IE +P   + +     R+ G NR+
Sbjct: 112 WGGGTPTFLSHDQMRDLIQGIKTHFQLLDDDSGEYSIEIDPRETQFDTVALLRELGFNRM 171

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ  E    + + R     +  A +  A R  F  +S DLIY LP Q +  +   L 
Sbjct: 172 SLGVQDFEPNVQKSVNRIQTEEQTFAVLEAARREGFKSISLDLIYGLPHQNVNSFSNTLN 231

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L+   D LS++       TLF    +  +  LPS    + +   T    +  G     
Sbjct: 232 KILAVKPDRLSIFNYAHLP-TLFKPQRRINEADLPSPTEKLAILQQTIHQLTEAGYIYIG 290

Query: 253 ISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +    E   +  N     N+  Y      D IG+G  +  +V     +      K 
Sbjct: 291 MDHFALPDDELTQAQRNGTLYRNFQGYSTHADCDLIGLGITSIGKVGDSYSQNV----KT 346

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
            E +   +  N   +     L+++ +    ++  L     + +   E     +       
Sbjct: 347 LEEYYAQIDANHIPIFRGIGLNADDKLRRAVITQLICHFSLDISAIENEYQIDFKNYFLT 406

Query: 359 ----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  +Q  G +ER    R+     G  ++ ++ 
Sbjct: 407 EWNELEKMQGDGLLERRD-ERIDILPAGRLLVRNIC 441


>gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
 gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
          Length = 460

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 155/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +    L +YVH PFC   C YC  N  + + +     +++    E++
Sbjct: 38  FDLLHALRDS--RKAGRPLSLYVHIPFCAHICYYCACNKVITKDRGRALPYLEKLEREIE 95

Query: 61  WMRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + +     + I  + FGGGTP+ +    +  ++  + +++ +    + + +IE +P   
Sbjct: 96  IVSRYIDKNQPIEQLHFGGGTPTFLSHDELRRLMQHLRQHFNLLDDDSGDYSIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+ +  R + R     E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPEVQRAVNRLQTLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT  ++   +   ++   D LSL+           +     D  LPS    + + 
Sbjct: 216 YGLPKQTPERFARTVAEVIALQPDRLSLFNYAHLPERFMPQRRISAD-DLPSPADKLAML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             +    +  G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QNSIEQLTRAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +    +     + + +     A       +++ +    ++  L     +   
Sbjct: 335 QIGD----LYSQNDSDINVYQQTLGNGQLATRRGLHCNADDRLRRAVIQQLICHFELHFG 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E   G                L R G IE      +     G  ++ S+ 
Sbjct: 391 GIEQAYGVVFRDYFAALWPELEQLHRDGLIELSAEG-IEVRPAGRLLVRSLC 441


>gi|149370093|ref|ZP_01889944.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [unidentified eubacterium SCB49]
 gi|149356584|gb|EDM45140.1| coproporphyrinogen oxidase (coproporphyrinogen III oxidase)
           [unidentified eubacterium SCB49]
          Length = 407

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 91/294 (30%), Positives = 145/294 (49%), Gaps = 9/294 (3%)

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
           S VE    A  ++   N  + Y+  G+NR+S+G+QS  E+ L+ + R HNA+EA A IH+
Sbjct: 115 SAVEDQQSAQSNTALTNKLKSYKTVGINRLSIGIQSFFEEDLKLMNRAHNATEAAACIHI 174

Query: 164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           A+  F  +S DLIY +PK T  +W   + +AL+  + HLS Y LT+E  T      K G 
Sbjct: 175 AKQYFKNISIDLIYGIPKMTNERWLENVDKALALEIPHLSCYALTVEPKTALENFIKKGI 234

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           +    + VA   ++L      A G   YE SN S  G ES +N  YW    Y+G+GP AH
Sbjct: 235 VPPVEDEVAQAHHSLLIERMEAAGFENYEFSNFSKPGWESQNNTAYWDGKSYLGVGPSAH 294

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S   V       +       +LK +  +   + E+E LS   + +E++M GLR + G+S+
Sbjct: 295 SYDGVQRSWNIANN----AIYLKKIAVDELPI-ERESLSKTDRYNEYVMTGLRTKAGVSL 349

Query: 344 KDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                + G        + +Q     G +     + +  T++G  + D + ++L 
Sbjct: 350 LKISEVFGDTFHDYFIKQMQVHVANGLLAVADNNVI-ITKKGKFLSDGIASDLF 402



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
            + +   E+   +       I++I+FGGGTPSL+    I  IL+ I   + V ++ EIT+
Sbjct: 1   MVAAICKELSLRKDEING-DIATIYFGGGTPSLLTASEIGQILNTIRSIYNVIAHPEITL 59

Query: 111 EANPSSV 117
           EANP  +
Sbjct: 60  EANPDDL 66


>gi|149277729|ref|ZP_01883869.1| coproporphyrinogen III oxidase [Pedobacter sp. BAL39]
 gi|149231417|gb|EDM36796.1| coproporphyrinogen III oxidase [Pedobacter sp. BAL39]
          Length = 460

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 160/408 (39%), Gaps = 22/408 (5%)

Query: 2   KYLSAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+  A   +      S+ + VY+H PFC   C YC  N+ + +    +  +I++ L E Q
Sbjct: 41  KWTEAVSRSFNDSNDSDGISVYIHLPFCESLCTYCGCNTRITKNHGVERPYIEAVLKEWQ 100

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              QL   R  I  +  GGGTP+   P+++ L++DGI     +  + E + EA+P +   
Sbjct: 101 MYLQLFDARPKIKEMHLGGGTPTFFSPEHLQLLIDGILDFADLHEDAEFSFEAHPGNTTS 160

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            +    RK G  R+SLG+Q  +      + R  +  E       AR I    +++DLIY 
Sbjct: 161 AHLIALRKLGFRRLSLGIQDFDPHVQLIINRIQSYQEVRDVTLKAREIGYTSINYDLIYG 220

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q +      ++  L  + D ++ Y        +     +  +  LPS ++  +LY L
Sbjct: 221 LPHQNLHGLSDTIEAVLKLSPDRIAFYSYAHVP-WVRAGQRRYTEADLPSADLKQELYEL 279

Query: 239 TQSITS-----AHGLHAYEISNHSFLGAESLHNL--NYWRYGD-----YIGIGPGAHSRV 286
            + +         G+  + ++N S   AE    L  N+  Y        +G+G  + S  
Sbjct: 280 GRKMLRTGGYVDIGMDHFTLTNDSLYTAERKGYLHRNFMGYTHQYSKLMVGLGVSSIS-- 337

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              +        K  E ++ ++      V +   L  E       ++ L  +   S    
Sbjct: 338 --DTWNAFAQNVKKVEDYISVIENGQFPVFKGHLLDEEDAIIRRHILNLMCKGHTSWHLP 395

Query: 347 EMLAGRNLD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E       D     R L + G +       ++ T  G   L +V    
Sbjct: 396 EEQCASLTDTTNRLRWLAQDGLVMLSDQD-VKVTPFGKRFLRNVCMAF 442


>gi|322378382|ref|ZP_08052837.1| coproporphyrinogen III oxidase [Helicobacter suis HS1]
 gi|322380266|ref|ZP_08054486.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS5]
 gi|321147303|gb|EFX41983.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS5]
 gi|321149195|gb|EFX43640.1| coproporphyrinogen III oxidase [Helicobacter suis HS1]
          Length = 353

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 33/375 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +   +Y+H PFC  KC YC FNS V      +E + Q+ + +++    L     +SSIF
Sbjct: 5   PSPSSLYLHIPFCQSKCGYCAFNSFVG-LDALKEAYTQALICDLK--ASLITSPVLSSIF 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ ++P+    I + I+K   + S++EIT+EANP  +        ++ G  R+S+
Sbjct: 62  VGGGTPNSLKPKFYEQIFNAISKYAYLKSDIEITLEANPDLINQEWCCILKQLGATRLSI 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS     L  L R H+ S    A+ +A    F  +S DLIY  P  T  + E E ++A
Sbjct: 122 GVQSFFPDKLHLLQREHDHSAIFKALDIAYQSGFEHLSIDLIYNTPLDTKERLEEECKQA 181

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               +DHLS Y LT+E  T   K     +L        + L    +      G   YE+S
Sbjct: 182 SKLPIDHLSAYSLTLEDNTRLIKDINPCEL--------LHLDTFLKECLKDRGFKQYEVS 233

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++    +  HNL YW   +Y G G GA  R+K         +  + ++  K        
Sbjct: 234 NYAR-DYQVRHNLGYWEGLEYFGCGAGAVGRIKQQRLYKIKDVATYIDNPFKA------- 285

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
               E LS +    E L +GLR   G+ ++         LD    + L ++  I  ++  
Sbjct: 286 --RVENLSQKDLWFESLFLGLRCILGVPLE--------GLDSLKVQTLLKEK-ICVIENK 334

Query: 375 RLRCTQRGMTMLDSV 389
           RL       ++ D +
Sbjct: 335 RLIARD--FSLADEI 347


>gi|308184971|ref|YP_003929104.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
 gi|308060891|gb|ADO02787.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
          Length = 345

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 110/368 (29%), Positives = 168/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHARLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPMIETILKSGIENISIDLIYNTPLDNEISLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +  +VD  N+ +          YE+SN++  G
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSSVDFDNVVREALEGFSFKQYEVSNYAR-G 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    + L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVELSF--------LDENKVKFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|261215309|ref|ZP_05929590.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|260916916|gb|EEX83777.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
          Length = 245

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 125/217 (57%), Positives = 162/217 (74%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M   G  + G+YVHWPFC+ KCPYCDFNSHVR   V Q  +  +F  EM+ +R+ TGPR+
Sbjct: 20  MHADGETAFGIYVHWPFCLAKCPYCDFNSHVRHKPVDQARYGAAFRREMETLRERTGPRT 79

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +  +LDGIA  W+V+ ++E+T+EANP+SVE + F+GYR AGV
Sbjct: 80  VTSIFLGGGTPSLMQPETVGALLDGIASYWSVAPDIEVTLEANPTSVEADRFRGYRAAGV 139

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLG+Q+L +  LR LGR H+ +EA AAI LAR IFPR+SFDLIYA P QT+  W  E
Sbjct: 140 NRVSLGIQALNDPDLRRLGRMHSVAEAKAAIRLAREIFPRLSFDLIYARPDQTIEAWREE 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           L+ A+  A DHLSLYQLTIE+GT FY + K G L  P
Sbjct: 200 LKEAIGLAADHLSLYQLTIEEGTQFYNLWKAGKLTTP 236


>gi|163782298|ref|ZP_02177296.1| coproporphyrinogen III oxidase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882331|gb|EDP75837.1| coproporphyrinogen III oxidase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 456

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 83/398 (20%), Positives = 154/398 (38%), Gaps = 26/398 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           + +    L +Y H PFC   C YC  N  +   K  +  ++     EM  + +L    R 
Sbjct: 45  SNERKTPLSLYFHIPFCESGCYYCGCNIIISHRKGIERPYLDRVYREMDMVSELLDRERR 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + +GGGTP+ +EP  I   +  I + +T S + E++IE +P        Q  R  G 
Sbjct: 105 VEQLHWGGGTPNYLEPDEIREFMGEIKRRFTFSEDAEVSIEIDPRYATDEQLQTIRDVGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+G+Q L+E+  R + R          +   R   F  ++ DLIY LP QT   ++ 
Sbjct: 165 NRVSMGLQDLDEKVQRAINRIQPYELMERTMKRLRELGFYSINIDLIYGLPYQTRESFQR 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +++ +    + +++Y           + H D D  LPS    + +  +        G  
Sbjct: 225 TVEKVIELDPNRIAVYSFAYVPWVKPIQKHIDPD-TLPSAEEKLSIIEMVIEKFQDAGYV 283

Query: 250 AYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
              + + +           E     N+  Y      + +GIG  +   ++    +     
Sbjct: 284 YIGMDHFAKPEDELAVAQREGKLWRNFQGYTTRKGVELLGIGATSIGMLQDSYFQNY--- 340

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K    +   + +    V     L+ +      ++M +    G+S    E   G N +  
Sbjct: 341 -KTLREYNVAIDEGRLPVFRGYILNDDDFIRREVIMDIMCNLGVSFSRIEEEFGINFEDY 399

Query: 358 C------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                   R L+  G IE ++  R+     G  ++ +V
Sbjct: 400 FERELEELRELEEDGLIE-LKDRRINILPVGRLLIRNV 436


>gi|315637214|ref|ZP_07892434.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri JV22]
 gi|315478486|gb|EFU69199.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri JV22]
          Length = 455

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 149/383 (38%), Gaps = 24/383 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
                L +Y+H PFC   C +C  N+     +  +  +I+    E+  ++  L   R ++
Sbjct: 43  SDDRPLSLYIHMPFCRSACYFCGCNTIFTSKEDKKTRYIEYLKKELNILKNHLNTKRVVT 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P  + +++  I +     S + EI+ E +P    V +    +  G N
Sbjct: 103 QMHFGGGTPTFFSPSQLEVVITAIKEIFPNFSPDAEISCEVDPRYFTVEHMNVLKAGGCN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ L+E+  + + R          I +AR      ++ DLIY LP QT   ++  
Sbjct: 163 RLSFGVQDLDEEVQKTIHRIQPFELTQNVIKIAREAGIHSINTDLIYGLPYQTRESFKKT 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ ++   D  +++        L   M K  +   P   V +++   T    +++G   
Sbjct: 223 LEQMITLNTDRFAVFNYAHVP-WLMKTMRKFDETTFPKPEVKLEMLKDTIDFFTSNGYKM 281

Query: 251 YEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D IGIG  +               
Sbjct: 282 VGMDHFAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGIGLTSIG----NGVDYYAQN 336

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  E W   +      V +   LS +    +F++M L     +++K  E     N    
Sbjct: 337 FKELEPWENAIDNGDLPVYKGYRLSDDDMLRQFVIMELMSNFSLNIKRVEEEFKINFKEY 396

Query: 358 CERNLQRQGFIERVQFSRLRCTQ 380
            +  ++     E      L+ T 
Sbjct: 397 FDDAIKA--LKEFEDAQLLKITD 417


>gi|86157516|ref|YP_464301.1| coproporphyrinogen III oxidase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774027|gb|ABC80864.1| coproporphyrinogen III oxidase, anaerobic [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 458

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 85/401 (21%), Positives = 160/401 (39%), Gaps = 27/401 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGP 68
               Q    L +YVH PFC + C +C  N      +   + ++     E+  +  +L   
Sbjct: 43  ARANQQGGPLSIYVHLPFCREMCRFCGCNVVATHDRTRADAYLDVLEKEVALVAAKLPDR 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R+ S + +GGGTP+ ++ + +    D +A+++T +S+VE  IE +P+    +  +   K 
Sbjct: 103 RAASQLHWGGGTPTFLDEKQLVRCHDILARHFTFTSDVEKAIEIDPAITTRSQIEVLAKL 162

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           G NRIS+GVQ  + +    +GR     E    +  AR N F  ++ DLIY LP QT   W
Sbjct: 163 GFNRISMGVQDFDARVQEVVGRIQGEKETADLVQAARDNGFKGVNLDLIYGLPYQTPETW 222

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L+R L+   D ++++       +  ++     +  LP     V+L+       +  G
Sbjct: 223 KKTLERILAIHPDRMAVFGFAYVPWSKPHQRLLPQEA-LPKTEQRVELFLSAVEAFTGAG 281

Query: 248 LHAYEISNHS-----FLGAESLHNL--NYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +        A+S   L  N+  Y      D +  G  + S +     + A 
Sbjct: 282 YRLIGLDHFALESDELAVAQSGGYLYRNFQGYTVRPADDTVAFGMTSISDIGGAYAQNAH 341

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                 + W   V      V     +S++     F +  +     + +++     G    
Sbjct: 342 K----LKDWEAKVGAGIIPVDRGASMSADDVMRRFTINRVMCLLRLDLREIAEKFGPEGR 397

Query: 356 IECE-------RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              E       + L+  G +       L+ T  G  ++ +V
Sbjct: 398 AAVEADLRAGVKELEDDGLVT-FDGDVLKVTPLGQLLVRNV 437


>gi|294056296|ref|YP_003549954.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615629|gb|ADE55784.1| oxygen-independent coproporphyrinogen III oxidase [Coraliomargarita
           akajimensis DSM 45221]
          Length = 454

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 76/401 (18%), Positives = 141/401 (35%), Gaps = 30/401 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +Y H PFC   C +C  N      +   ++++     E+  +     P R   
Sbjct: 45  ESDAPLSLYFHLPFCETLCWFCGCNMIPTLDRTKADDYLDLVEQELAMLAPKVAPGRKAV 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTP+    + I  +   I +++    + E ++E +P  +   +   + + G+ R
Sbjct: 105 QLHFGGGTPNFFGAEQIDRLAGLIDQHFEFVPDAEKSVELDPRRLGAEHVDAFARMGLTR 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
            S GVQ    +    + R       +AA+ L R+  F  ++ DLIY LPKQ+   +   L
Sbjct: 165 ASFGVQDCNPEVQEAIHRIQPQEMNVAAMELLRSRGFDSVNLDLIYGLPKQSPESFNQTL 224

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              L    D  +++           +   +    LP     + L  L     +  G    
Sbjct: 225 DDVLELKPDRFAIFNYAHVPWMRPAQKILER-AGLPDAETKLQLLKLCVERLTDAGYVYI 283

Query: 252 EISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +           E     N+  Y      +  G G  + S+   G  +      K
Sbjct: 284 GMDHFALPTDELVIAQREGTLQRNFQGYSTRAGVEICGFGISSISQGNNGFRQNV----K 339

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             E++   + +    V +   L++E +    ++M L     +         G N +    
Sbjct: 340 DIETYRAALARGEIPVSKGYELTAEDKLRGDVIMRLMCDMKLDYATMSQRWGINFESHFA 399

Query: 360 RNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             +       + G IE         T +G       I NLA
Sbjct: 400 AAIAQLAEPAQDGLIELYATG-FTVTDKGRFF----IRNLA 435


>gi|104780944|ref|YP_607442.1| coproporphyrinogen III oxidase [Pseudomonas entomophila L48]
 gi|95109931|emb|CAK14636.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent [Pseudomonas entomophila L48]
          Length = 460

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 156/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   + +  L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRES--RRATRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +     P+  +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LIACHLDPKQVVEQLHFGGGTPTFLSHVELRQLMATLRQHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAVNRLQSLEQTRTLIEAARTLQFRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +     LP+    +++ 
Sbjct: 216 YGLPKQTPEGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDSADLPAPAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
           + T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 HATIDQLTAAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +     A       + + +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLNTYQDTLSSAQLATQRGLLCNQDDRLRRAVIQQLICHFELDFE 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            +E     +              +QR G I       +R    G  ++ SV 
Sbjct: 391 PFEQAFTIDFRGYFNDQWPELLTMQRDGLISLDAKG-IRVLPAGRLLVRSVC 441


>gi|254779770|ref|YP_003057876.1| coproporphyrinogen III oxidase [Helicobacter pylori B38]
 gi|254001682|emb|CAX29908.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Helicobacter
           pylori B38]
          Length = 345

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 100/328 (30%), Positives = 155/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCESKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-HEKIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHASLSLDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNVVKEALEGFSFKQYEVSNYAR-D 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           LS + +  E L +GLR   G+ +   + 
Sbjct: 283 LSEQDKRLEKLFLGLRCELGVELSLLDE 310


>gi|331016971|gb|EGH97027.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 460

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 80/413 (19%), Positives = 156/413 (37%), Gaps = 32/413 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E++
Sbjct: 38  FELLHALRES--RKARRPLSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIR 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   
Sbjct: 96  MLACHLAPSQVVEQLHLGGGTPTFLSHDELRRLMARLRAHFTLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +  +    R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWASMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP  +  + + 
Sbjct: 216 YGLPRQTPQGFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDASDLPDAHTKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAH 283
             T    +  G     + + +    E        +LH  N+  Y      D IG+G  A 
Sbjct: 275 ERTVEQLTDAGYRYNGMDHFALPDDELAIAQEELTLHR-NFQGYTTHGHCDLIGLGVSAI 333

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S+V      +          + +++  +  A +     S + +    ++  L     ++ 
Sbjct: 334 SQVGD----LYSQNSSDLNDYQRLLDSDQPATLRGLICSEDDRIRRAVIQQLICHFTLNF 389

Query: 344 KDWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            + E     +              +   G I     S +     G  ++ SV 
Sbjct: 390 SELEKAFAISFRDYFADAWPQLLCMADDGLITLSD-SAIEVRPAGRLLVRSVC 441


>gi|306845256|ref|ZP_07477832.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
 gi|306274415|gb|EFM56222.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
          Length = 444

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 151/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAVREDVIENFVNALLGEIRMVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +     +E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDPLMEHAIELDPRTVTPLLVKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|210135385|ref|YP_002301824.1| coproporphyrinogen III oxidase [Helicobacter pylori P12]
 gi|210133353|gb|ACJ08344.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori P12]
          Length = 345

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 153/328 (46%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIHHHARLSLDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +    +  N  +          YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCTNFDNAIKEALEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           LS + +  E L +GLR   G+ +   + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVELSLLDE 310


>gi|157737488|ref|YP_001490171.1| coproporphyrinogen III oxidase [Arcobacter butzleri RM4018]
 gi|157699342|gb|ABV67502.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           butzleri RM4018]
          Length = 455

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/383 (21%), Positives = 149/383 (38%), Gaps = 24/383 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
                L +Y+H PFC   C +C  N+     +  +  +I+    E+  ++  L   R ++
Sbjct: 43  SDDRPLSLYIHMPFCRSACYFCGCNTIFTSKEDKKTRYIEYLKKELNILKNHLNTKRVVT 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P  + +++  I +     S + EI+ E +P    V +    +  G N
Sbjct: 103 QMHFGGGTPTFFSPSQLEVVITAIKEIFPNFSPDAEISCEVDPRYFTVEHMNVLKAGGCN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ L+E+  + + R          I +AR      ++ DLIY LP QT   ++  
Sbjct: 163 RLSFGVQDLDEEVQKTIHRIQPFELTQNVIKIAREAGIHSINTDLIYGLPYQTRESFKKT 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ ++   D  +++        L   M K  +   P   V +++   T    +++G   
Sbjct: 223 LEQMITLNTDRFAVFNYAHVP-WLMKTMRKFDETTFPKPEVKLEMLKDTIDFFTSNGYKM 281

Query: 251 YEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D IGIG  +               
Sbjct: 282 VGMDHFAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGIGLTSIG----NGVDYYAQN 336

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  E W   +      V +   LS +    +F++M L     +++K  E     N    
Sbjct: 337 FKELEPWENAIDNGDLPVYKGYRLSDDDMLRQFVIMELMSNFSLNIKRVEEEFKINFKEY 396

Query: 358 CERNLQRQGFIERVQFSRLRCTQ 380
            +  ++     E      L+ T 
Sbjct: 397 FDDAIKA--LKEFEDAQLLKITD 417


>gi|108563593|ref|YP_627909.1| coproporphyrinogen III oxidase [Helicobacter pylori HPAG1]
 gi|107837366|gb|ABF85235.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori HPAG1]
          Length = 352

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 163/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALNQT-DEPIESVFIGGGT 67

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 68  PNTLSVESFERIFESIHHHANLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 127

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ +       + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 128 REDKLLFLERQHSKNIVPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 187

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K  K             +  N+ +          YE+SN++   
Sbjct: 188 HLSAYALSIEKNTNLEKNAKKPSYT--------NFDNVVRETLEGFSFKQYEVSNYAR-N 238

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 239 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 289

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           L+ + +  E L +GLR   G+ +  +         IE  +   +         +RL  + 
Sbjct: 290 LNKQDKRLEKLFLGLRCVLGVELG-FLDKNKVKFLIEENKAFIK--------NNRLVASD 340

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 341 --FFMADE 346


>gi|17988440|ref|NP_541073.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|17984225|gb|AAL53337.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella
           melitensis bv. 1 str. 16M]
          Length = 474

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 73  SLYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 132

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 133 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 192

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 193 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 252

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 253 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 311

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 312 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 367

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 368 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 427

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 428 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 459


>gi|15645840|ref|NP_208018.1| coproporphyrinogen III oxidase [Helicobacter pylori 26695]
 gi|2314389|gb|AAD08271.1| oxygen-independent coproporphyrinogen III oxidase (hemN)
           [Helicobacter pylori 26695]
          Length = 352

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 156/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 67

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 68  PNTLSVKAFERIFESIYQHASLSLDCEITTEANPELITKAWCQGLKGLGINRLSLGVQSF 127

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A A   + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 128 REDKLLFLERQHSKNIAPAIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 187

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +       N+ + I        YE+SN++   
Sbjct: 188 HLSAYALSVEKNTNLEK--------NAKKPSCAHFDNVVREILEGFSFKQYEVSNYAR-N 238

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  L+          + E 
Sbjct: 239 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFFAKKLIENYIKDPLQR---------QVET 289

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           L+ + +  E L +GLR   G+ +   + 
Sbjct: 290 LNKQDKRLEKLFLGLRCVLGVELSFLDE 317


>gi|188579703|ref|YP_001923148.1| coproporphyrinogen III oxidase [Methylobacterium populi BJ001]
 gi|179343201|gb|ACB78613.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           populi BJ001]
          Length = 450

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 151/395 (38%), Gaps = 28/395 (7%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +AY   +       +  +Y+H PFC   C YC  ++H+ R+    ++++ S   E+  + 
Sbjct: 33  AAYAEWLRALPAETTASLYLHVPFCRSLCWYCGCHTHITRHDAPIDDYLASLRKEIGLVA 92

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                R  +  + FGGGTP+++ P     ++  +  ++  +   EI +E +P ++     
Sbjct: 93  GHLERRPAVRHVHFGGGTPTIMAPAAFRELMALLRAHFPFAPEAEIAVEIDPRTLAPAMI 152

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
           +   +AGV R SLGVQS +      + R  + +   AA+  L      R++ DLIY LP 
Sbjct: 153 RALGEAGVTRASLGVQSFDPAVQAAIRRRQDYAVTEAAVAGLRAAGIRRINLDLIYGLPH 212

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q++      +++ L+   D L+++       +            LP              
Sbjct: 213 QSVESCVETVRQCLALRPDRLAVFGYAHVP-SFKKHQRLIDAATLPDAAARRAQAQAVAD 271

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
             +  G     + +++          AE   + N+  Y        IG G  A  R+  G
Sbjct: 272 ALAGAGYRRIGLDHYALPDDPMAVARAEGQLHRNFQGYTTDSSDALIGFGASAIGRLPQG 331

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                +  E    ++   V  N  A V    L+ E +    L+  +     + V      
Sbjct: 332 ----YVQNEPALRAYAARVAANDVATVRGYALTPEDRLRAALIERIMCDGAVEVGAVCRS 387

Query: 350 AGRNLDI-----ECERNLQRQGFIERVQFSRLRCT 379
            GR+ +         R L   G ++R     +R T
Sbjct: 388 HGRDPEALLASLPRLRALTDHGLVKR---EGMRLT 419


>gi|299132110|ref|ZP_07025305.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
 gi|298592247|gb|EFI52447.1| oxygen-independent coproporphyrinogen III oxidase [Afipia sp.
           1NLS2]
          Length = 457

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 149/393 (37%), Gaps = 28/393 (7%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
             Y   + G     ++ +Y+H PFC   C YC  N+ + R       ++ +   E++ + 
Sbjct: 40  HTYRQWLAGIPQGKTVSLYLHIPFCQSMCWYCGCNTTIVRRNEPVAEYLAALSQEIERVT 99

Query: 64  QLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
              G R  + ++ FGGGTP+++ P   + ++  + + +   S+ EI IE +P  +     
Sbjct: 100 DHIGQRLKVGAVHFGGGTPTIMTPDQFSDLMTVLRQKFNFLSDAEIAIEIDPRRLTREMS 159

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
                 G+ R SLGVQS +    + + R  +  +  A    L       ++FDLIY LP 
Sbjct: 160 LALGANGITRASLGVQSFDPAVQQAVNRIQSFEDTAAVTEGLRAAGINSINFDLIYGLPH 219

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+      +Q+ +    D  +++       T      K  +  LP         N+   
Sbjct: 220 QTVASCFDTVQKCMQLRPDRFAVFGYAHIP-TFKKHQRKIDEAALPDGEQRHLQANMIAH 278

Query: 242 ITSAHGLHAYEISNHSFL--------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
             +  G     + + +           A  LH  N+  Y        IG G  A  R++ 
Sbjct: 279 CLTNAGYRQIGLDHFALPADSLTTAQAAGHLHR-NFQGYTTDDSDILIGFGASAIGRLEQ 337

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G  +  ++    P ++   +        +   LS++ +    ++  +     + ++    
Sbjct: 338 GYVQNEVA----PLTYRTQIGNGNLPTRKGYALSADDRLRADIIERIMCDFRVDLQQVCA 393

Query: 349 LAGRNLD-----IECERNLQRQGFIERVQFSRL 376
             G   +      +    L   G I R++ S L
Sbjct: 394 RHGTRPETLLRSADRLDMLIADG-IVRIEGSVL 425


>gi|307297233|ref|ZP_07577039.1| oxygen-independent coproporphyrinogen III oxidase [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306916493|gb|EFN46875.1| oxygen-independent coproporphyrinogen III oxidase [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 379

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 103/376 (27%), Positives = 169/376 (44%), Gaps = 11/376 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +G+Y+H PFC ++C YCDF + V         +      E++          + +++FGG
Sbjct: 3   MGLYIHIPFCARRCSYCDFCT-VEYDGNLVRQYHDLLKKEVEMY---PASERVETLYFGG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+PSL   + +  ++  I+ ++  +  VE+TIEANP  + + N + +R  G NR+S+G+Q
Sbjct: 59  GSPSLYPVELLRDLMSFISCSFDAAP-VEVTIEANPWELNLKNLKQWRDIGFNRLSIGIQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S E + L    R          +  +R+IF  ++ D I  LP +  +     L+   +  
Sbjct: 118 SSEREILERCDRP-VPKNLRDRLMASRDIFENLNLDFILGLPGENESNVAGNLEMISAIN 176

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            DH+S Y    +  T   ++  D  + LP + +   L+++     S  G   YEIS+   
Sbjct: 177 PDHVSYYVFDSDHETKLMRLVHDDIIDLPRQEIVEGLHDIILDSLSKMGFSRYEISSWER 236

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              E LHNL YWR   Y+G G  A S      +     + ++   +L  V      V E 
Sbjct: 237 GRRECLHNLKYWRNEQYMGFGVSAGSHFDRKRYVNTSDLLEY--RYL--VNLRRRPVFEL 292

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRC 378
              S  Q+  E L MGLRL EG+ +   E+    N  +  E       ++     SR+R 
Sbjct: 293 RENSVIQEVFETLFMGLRLMEGVDLSKLELPDELNNTLVSELRAHLGDYLSP-DNSRIRL 351

Query: 379 TQRGMTMLDSVIANLA 394
              GM    SV+  L 
Sbjct: 352 NDNGMDFSRSVLEKLI 367


>gi|32266114|ref|NP_860146.1| coproporphyrinogen III oxidase [Helicobacter hepaticus ATCC 51449]
 gi|32262163|gb|AAP77212.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           hepaticus ATCC 51449]
          Length = 371

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 107/353 (30%), Positives = 174/353 (49%), Gaps = 23/353 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGG 79
           +YVH PFC  KC YC FNS V   +   E++IQ+   +++     L     ISSIFFGGG
Sbjct: 3   LYVHIPFCGSKCGYCAFNSFVV-EQDNFESYIQALCADIEHTLCHLYPHSHISSIFFGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+L+  ++   I   + KN  +S + EIT+EAN + +     +     G NR+S+G+QS
Sbjct: 62  TPNLLHSEHYEAIFTILYKNAFISKDCEITLEANVNYLNTQWCKDLVSLGANRLSVGIQS 121

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  + FL R H+  E    I  A N  F  +S DLI   P  +      E+ +A +  
Sbjct: 122 FDKDKIAFLEREHSVYEIAKCIENAYNGGFKNISCDLIINTPLDSKALISSEITQAAALP 181

Query: 199 VDHLSLYQLTIEKGTLFY----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + H+S+Y L+I++G+ F+    K     +          +L    +     +G + YE+S
Sbjct: 182 LSHISVYTLSIDEGSRFFLESKKSKPIQNSKTIDSKTDEELSFWARECLKENGFYQYEVS 241

Query: 255 NHSF--LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES-WLKMVRKN 311
           N+      AE  HNL YW+  +Y+G G GA  R+     R   S+ ++ ++ + ++V   
Sbjct: 242 NYVKFNTNAECKHNLGYWQGEEYLGCGAGAVGRIANKRTRAYPSLNEYIKNPYYRLV--- 298

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNL--DIECERN 361
                  E LS E    E +M+GLR  +G+ +  + +    + L  D +C R 
Sbjct: 299 -------EELSEEDLRLEQIMLGLRCVKGVDMAVFDDERFLKPLFDDKKCFRE 344


>gi|313497896|gb|ADR59262.1| HemN [Pseudomonas putida BIRD-1]
          Length = 460

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 154/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L+A   +   +    L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLNALRES--RRAVRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LVACHLAPKQRVEQLHFGGGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +     LPS    +++ 
Sbjct: 216 YGLPKQTPEGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDSNDLPSAAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
           + T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 HATIDQLTAAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +     A       + + +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLNTYQDSLSNAQLATQRGLLCNHDDRIRRAVIQQLICHFELDFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +              LQR G I       +R    G  +  SV 
Sbjct: 391 PIEQAFTLDFRGYFNDLWPELLTLQRDGLISLDDKG-IRILPAGRLLARSVC 441


>gi|330899463|gb|EGH30882.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330976029|gb|EGH76095.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 460

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 149/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q    +   + + +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPTQNPQTFSHTVDKVIDLQPDRLSVFNYAHLPE-RFMPQRRIDVADLPDAESKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELATAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          +L+++  +  A       + + +    ++  L     +   
Sbjct: 335 QVGE----LYSQNSSDLNEYLRLLDSDQPATRRGLICNDDDRIRRAIIQQLICHFTLDFG 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I   +   +     G  ++ +V 
Sbjct: 391 EIEKTFCIDFRDYFSEAWPQLLGMASDGLITLSETG-IEVRPAGRLLVRAVC 441


>gi|288957090|ref|YP_003447431.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
 gi|288909398|dbj|BAI70887.1| oxygen-independent coproporphyrinogen III oxidase [Azospirillum sp.
           B510]
          Length = 487

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 153/401 (38%), Gaps = 25/401 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-S 70
           T + + S  +Y+H PFC K C YC  ++ +         ++     E+  +      R +
Sbjct: 78  TIEPARSGSLYLHVPFCQKMCWYCGCHTKIVARYAPIAEYLGHMRREIAMVADRIPGRLA 137

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  I FGGGTP+++ P +   ++  +   + ++++ E+ +E +P ++         +AGV
Sbjct: 138 VRHIHFGGGTPTMMAPDDFEAMIALLRGRFDIAADAELAVEIDPRTLTAEMAAALGRAGV 197

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           NR SLGVQ  +    + + R    +    A+   R+     ++ DL+Y LP Q++     
Sbjct: 198 NRASLGVQDFDGTVQQAINRVQPRAVTEQALAWLRDAGITSVNLDLMYGLPHQSVESVSR 257

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
               AL  A D LS++        +     K  + VL       + +       SA G  
Sbjct: 258 SAAIALEMAPDRLSVFGYAHVP-WMKTHQKKIDESVLADSLGRWEQFAAIADTLSAAGYS 316

Query: 250 AYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISI 297
           A  + + +  G        E     N+  Y        +G G  +   +  G  + A+  
Sbjct: 317 AIGLDHFARPGDELAVQQEEGRLGRNFQGYTTDDAEVLLGFGSSSIGALPQGYVQNAVPF 376

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---L 354
               + +   V +      +   L+ + +    L+M L     +         G+     
Sbjct: 377 ----DQYAAAVEEGRLPTGKGIALTDDDRLRRDLIMRLMCDLSVDTAAIARAHGQPESCF 432

Query: 355 DIECE--RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           D E E   +L   G +  V+  R+   +    ++  V A  
Sbjct: 433 DAELEGMADLVADG-VAVVEGRRVHVPESARPLMRIVAARF 472


>gi|163785932|ref|ZP_02180380.1| O2-independent coproporphyrinogen III oxidase [Flavobacteriales
           bacterium ALC-1]
 gi|159877792|gb|EDP71848.1| O2-independent coproporphyrinogen III oxidase [Flavobacteriales
           bacterium ALC-1]
          Length = 454

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 77/409 (18%), Positives = 152/409 (37%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENN-MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++ ++   + +    S  L +Y+H PFC   C +C  +  + +    +  +I++ L E  
Sbjct: 34  QWKTSLRQSFLESNSSEGLSLYLHLPFCESLCTFCGCHKRITKRHEVESPYIKALLKEWS 93

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
             R+L   +  I  +  GGGTP+   P+N+  ++  + K   ++ + E + E +P++   
Sbjct: 94  LYRKLLDGKPKIKELHLGGGTPTFFSPENLEFLISELLKVSDLAEDYEFSFEGHPNNTTE 153

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + Q     G  R+S GVQ    +    + R            LAR I    +  D+I+ 
Sbjct: 154 EHLQTLFDLGFRRVSFGVQDYNIKVQIAIHRIQPFENVKRVTELARKIGYTSVGHDIIFG 213

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT       + +  +   D ++ Y                 D  LPS       Y  
Sbjct: 214 LPFQTEADVIETINKTETLMPDRIAFYSYAHVPWIKGNGQRGFKDEDLPSGTSKRQQYET 273

Query: 239 TQSITSAHGLHAYEISNHSF--------LGAESLHNLNYWRYGD-----YIGIGPGAHSR 285
            + +    G     + + +         L  E+LH  N+  Y        +G+G  + S 
Sbjct: 274 GKKLLEKVGYVEIGMDHFALKSDTLFKALINETLHR-NFMGYTASKTQVMVGLGVSSISD 332

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  +   SI    E +  +V +    V     L++E       ++ L      S  D
Sbjct: 333 SWYGFAQNVKSI----EEYYHLVNEGIIPVYRGHILNTEDLTIRKHILNLMCNFKTSWID 388

Query: 346 WEMLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +       +I    +  +  G +E  +  ++  T++G   + ++    
Sbjct: 389 SKKEFSELPEILIKLKEFEHDGLLE-FKRKQVTVTEKGKPFIRNICMAF 436


>gi|254720742|ref|ZP_05182553.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|265985798|ref|ZP_06098533.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306839304|ref|ZP_07472120.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
 gi|264664390|gb|EEZ34651.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|306405552|gb|EFM61815.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
          Length = 450

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 144/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGEGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     + V       G + ++     E   
Sbjct: 344 SRVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVDVAAVCAAHGFDPEVLMKQNETLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|307637899|gb|ADN80349.1| Putative coproporphyrinogen III oxidase of BS HemN-type
           [Helicobacter pylori 908]
 gi|325996496|gb|ADZ51901.1| Putative coproporphyrinogen III oxidase [Helicobacter pylori 2018]
          Length = 345

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYIQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHASLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY       T  + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTSLDNETSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +  +VD  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSSVDFDNVVREALEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           L+ + +  E L +GLR   G+ +   + 
Sbjct: 283 LNKQDKRLERLFLGLRCVLGVELSLLDE 310


>gi|317009906|gb|ADU80486.1| coproporphyrinogen III oxidase [Helicobacter pylori India7]
          Length = 345

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 156/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +SS+ EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYRNVRLSSDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELRLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +    +   + + +        YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCTNFDTVIKEVLEGFSFKQYEVSNYAR-D 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  H+L YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           LS + +  E L +GLR   G+ +   + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVELSLLDE 310


>gi|298290109|ref|YP_003692048.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
 gi|296926620|gb|ADH87429.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
          Length = 439

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 144/386 (37%), Gaps = 33/386 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +L +Y+H PFC   C YC   +   R       ++     E++++    G R+++ I +G
Sbjct: 46  NLSLYLHVPFCPALCFYCGCTTKATRRPEPVAAYVARLEREIEFVAAHAGGRTVTHIAWG 105

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  + +  + D I++ + +    E   E +P  V+          GV+R+SLGV
Sbjct: 106 GGTPSLVGGKALRRLYDRISEAFDLDRLTEHAFELDPREVDEEIADALAAIGVDRVSLGV 165

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q       R +GR         A+ L R      ++ DL+Y LP Q+        + A  
Sbjct: 166 QDFSAHVQRAIGRVQPFGTVERAVRLLREAGVSSVNLDLMYGLPHQSERDVRRTARLATL 225

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              + L+L+        +        +  LP     +      + +  A+G  A  + + 
Sbjct: 226 LGPERLALFGYAHVP-WMRPNQKMIDEKDLPGAAERLQQAEAAREVLLANGYAAVGLDHF 284

Query: 257 SFLG--------AESLHNLNYWRY----GD-YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +           A  LH  N+  Y     D  IG+G  + SR   G  + A        S
Sbjct: 285 ARPNDPLARAAAAGHLHR-NFQGYTVDAADALIGLGASSISRFPQGFTQNAPDA----AS 339

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQAD----EFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           +++ V     A       + E  A     E LM  L++   +    ++            
Sbjct: 340 YMRAVDAGRFATARGIAFTPEDVARGAYIERLMCDLQVD--LDTPTFDE------AAPRL 391

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTM 385
            +L   G +  ++   +  T  G   
Sbjct: 392 ASLAADGLVT-IEGHHVAMTATGRPF 416


>gi|26990955|ref|NP_746380.1| coproporphyrinogen III oxidase [Pseudomonas putida KT2440]
 gi|24985978|gb|AAN69844.1|AE016623_6 oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida KT2440]
          Length = 460

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 154/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L+A   +   +    L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLNALRES--RRAVRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LVACHLDPKQRVEQLHFGGGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +     LPS    +++ 
Sbjct: 216 YGLPKQTPEGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDSNDLPSAAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
           + T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 HATIDQLTAAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +     A       + + +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLNTYQDSLSNAQLATQRGLLCNHDDRIRRAVIQQLICHFELDFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +              LQR G I       +R    G  +  SV 
Sbjct: 391 PIEQAFTLDFRGYFNDLWPELLTLQRDGLISLDDKG-IRILPAGRLLARSVC 441


>gi|225686939|ref|YP_002734911.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256042927|ref|ZP_05445873.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256261920|ref|ZP_05464452.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|265989360|ref|ZP_06101917.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|225643044|gb|ACO02957.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|263000029|gb|EEZ12719.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091400|gb|EEZ15936.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326411370|gb|ADZ68434.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
          Length = 450

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|237817558|ref|ZP_04596548.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|237787313|gb|EEP61531.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
          Length = 474

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 73  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 132

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 133 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 192

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 193 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 252

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 253 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 311

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 312 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 367

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 368 SCVASGEPPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 427

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 428 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 459


>gi|254457620|ref|ZP_05071048.1| oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
 gi|207086412|gb|EDZ63696.1| oxygen-independent coproporphyrinogen III oxidase
           [Campylobacterales bacterium GD 1]
          Length = 455

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 157/410 (38%), Gaps = 32/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-Q 60
           +Y+   E+      S  + +Y H PFC   C +C  N      +     ++     E+  
Sbjct: 34  EYIQKLESQ---DSSRPISLYFHLPFCKNACYFCGCNVVFTSKEDKMLRYMDYLKRELVI 90

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEV 119
             + +   R +  + FGGGTP+      +  I+  I   +    ++ EI+ E +P  ++ 
Sbjct: 91  LSKHVDCNREVLQMHFGGGTPTFFSAAQLKEIIAEIKSYFPNFRADAEISCEIDPRHIDE 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +  +   +AG NR+S G+Q   E+    + R    +    A+ LAR      ++ DLIY 
Sbjct: 151 DQMRVMSEAGFNRVSFGIQDFNEKVQIAVHRVQPYAITKYAMDLARKYNMISVNVDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q++  ++  L  +L+   D  +++        L   M K  +  LP  +  + +   
Sbjct: 211 LPFQSLETFKETLALSLTLNPDRFAVFNYAHVP-WLKKTMRKIDETTLPLPDEKLQIMQY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T    ++HG     + + +    E         LH  N+  Y      D IG+G  +   
Sbjct: 270 TIDFLTSHGYKMIGMDHFAKPEDELFKAISKGELHR-NFQGYTTKGGADLIGVGLTSIGE 328

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                ++      K    + + +            L+ + Q  ++++M L     + +K 
Sbjct: 329 GVDSYNQNF----KVMGEYEEAIDAGKLPFERGIVLNEDDQIRQYVIMELMSNFKLDIKR 384

Query: 346 WEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +E L            IE  +       +   +   + C++ G  ++ ++
Sbjct: 385 FEKLFNIEFKTYFADAIEALKPFAEDELLTMDEN-IIECSETGTLLIRNI 433


>gi|224419197|ref|ZP_03657203.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|253828127|ref|ZP_04871012.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           BU550 [Helicobacter canadensis MIT 98-5491]
 gi|313142701|ref|ZP_07804894.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|253511533|gb|EES90192.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           BU550 [Helicobacter canadensis MIT 98-5491]
 gi|313131732|gb|EFR49349.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
          Length = 353

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 17/349 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + VY+H PFC  KC YC FNS   +  + +E ++Q+ + ++Q      G   ++S++ GG
Sbjct: 3   VAVYLHIPFCDSKCGYCAFNSKTNKNHL-KEQYMQTLVRDLQNKLLHFGVSKVTSLYIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E +    I   +      + ++EI IEANP+S+ +   +  ++ GVNR+SLGVQ
Sbjct: 62  GTPSVVESRQYRSIFKILEPY--FTQDIEINIEANPNSLSLEWIRELKQMGVNRLSLGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S     LRFL RNH       AI  A  +    +S DLIY  P       + E+Q A   
Sbjct: 120 SFFVDKLRFLERNHRVDSVFEAIDNATKVGLENLSIDLIYGTPFCNQDLLKQEIQMASKL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            ++H+S YQL+I++G+ F+   K       +   ++  +   +      G   YE+SN+S
Sbjct: 180 PINHISAYQLSIDEGSRFFTQKKQEFSGEFAGFASMGHF--VREELRQAGFLQYEVSNYS 237

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G +S HNL YW   DY+G+G G    +          IE + +           A   
Sbjct: 238 R-GYQSKHNLAYWEQKDYLGVGAGGVGCIAGVRSYGVCGIEDYLKG----------AEYT 286

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           +E LS      E L +G R   G+            + ++ ++  +R G
Sbjct: 287 QETLSQRDLDLEHLFLGFRSCIGVLEDRITKKKELEILLKEKKVEKRAG 335


>gi|170726355|ref|YP_001760381.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
 gi|169811702|gb|ACA86286.1| oxygen-independent coproporphyrinogen III oxidase [Shewanella
           woodyi ATCC 51908]
          Length = 448

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 166/383 (43%), Gaps = 18/383 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSIS 72
           G   +G+YVH PFC + C  C +  H +  K     ++ +  TE+     R       I+
Sbjct: 37  GKQQMGIYVHIPFCNRLCFSCPYIKH-QTDKTITRRYLDALKTEISNYAARPYVQDHEIT 95

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             + GGGTP+ +    +  +L  +     +S +VE++IE  P  +     +     GV R
Sbjct: 96  LGYIGGGTPTALSSAELEELLGHLHSELNMSDDVELSIETTPIDITKKKAETLYNNGVKR 155

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           ISLGVQ+  ++ L  +GR  +      AI + +   F  ++ DL++ L  QTM  WE  L
Sbjct: 156 ISLGVQTFVQEELESIGRPSDPKMLENAIKICQEAGFTNINIDLMHGLNGQTMESWEYSL 215

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +A+   V  +S Y           +        +P+ +V  +++       + +G   Y
Sbjct: 216 DKAIELGVTCVSFYTYMEFAQVSTKRRKL---PPVPTTDVVDEMFMFAAKKLTENGFDGY 272

Query: 252 EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
                +  G +  +    W      I +GP A   +K   +    SI K    ++++V  
Sbjct: 273 FGDCFAKPGYQPRYGERSWSENIPIIPLGPTATGHLKDHWYFNEPSINK----YIEVVNS 328

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGF 367
               +   +++S E+     +++G++    +  K ++ L G +   + +   ++L+ +G 
Sbjct: 329 GQLPISMGQYISKEEAIRRGMILGVK-ASKVDRKMFKHLYGVDFVEKFQSEIQDLESKGL 387

Query: 368 IERVQFSRLRCT-QRGMTMLDSV 389
           +E  Q   L+ T  +G   LD++
Sbjct: 388 VELTQNE-LKVTDPKGWYYLDNI 409


>gi|325998084|gb|ADZ50292.1| putative coproporphyrinogen III oxidase [Helicobacter pylori 2017]
          Length = 345

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYIQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESINQHASLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY       T  + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTSLDNETSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +  +VD  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSSVDFDNVVREALEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           L+ + +  E L +GLR   G+ +   + 
Sbjct: 283 LNKQDKRLERLFLGLRCVLGVELSLLDE 310


>gi|320536527|ref|ZP_08036554.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema phagedenis F0421]
 gi|320146627|gb|EFW38216.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema phagedenis F0421]
          Length = 386

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 173/389 (44%), Gaps = 31/389 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNS----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +Y+H PFC+++C YCDF S    +          FI   L + +  ++        +++
Sbjct: 3   ALYIHIPFCIQRCTYCDFFSLAHFNAFIPYKPFPAFIARLLEDAELEKKRFSATGWDTVY 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL+ PQ+IA +   I+++       E TIEANP  +         + G+NRIS+
Sbjct: 63  IGGGTPSLLAPQDIAALGKHISESQQF-PIKEFTIEANPEDITDAFLAACAEGGINRISV 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF------PRMSFDLIYALPKQTMTQWEM 189
           G+QSLE+Q L    R  +  +   A+    N F        +S D I  L  QT      
Sbjct: 122 GIQSLEQQVLSAERRRGSPEKTQEALRKINNSFSIFPKGLSLSCDFIAGLQAQTQAMLLR 181

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ  L++   H+SLY L   +            L    E     +    ++    +G  
Sbjct: 182 DLQAVLAFNPKHISLYGLCTARP-----------LSEEREEKIASMLYAGKAFLEKNGFF 230

Query: 250 AYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSH--RVAISIEKHPESWLK 306
            YEISN +   A ESLHN  YW+  +Y GIGPGA   +        +    +K+ + WL 
Sbjct: 231 HYEISNFAKNAASESLHNKTYWKMENYAGIGPGASGTLINSDKPSGIRSCAKKNIKLWLS 290

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---Q 363
               N   V + E L  ++  +E L+MGLRL EGI  + +      ++       L   +
Sbjct: 291 --ENNRSNVYDYEILGEKELIEEVLLMGLRLTEGIERQGFIKKFDNDITRYIPETLCIWE 348

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           ++G    +    +R T+ G+  LD  +  
Sbjct: 349 KRGDC-IIDKKHIRLTETGINFLDIFLRQ 376


>gi|317970578|ref|ZP_07971968.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. CB0205]
          Length = 374

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 175/355 (49%), Gaps = 26/355 (7%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
            E++++    E++          +S+I+ GGGTPS++  + +  +L  + + +  +   E
Sbjct: 20  IESYLELLCGEIE---ASPAGPPLSTIYVGGGTPSMLTAEQLRAVLRSLKRRYGFAPGAE 76

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I++E +P+S +    QGY KAGVNR+SLG QS ++  L  LGR H   + + A    +  
Sbjct: 77  ISLELDPASFDHIGLQGYLKAGVNRVSLGGQSFDDVVLERLGRRHRCRDLLEAAAWLQQA 136

Query: 168 FP-----RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                    S DLI +LP  T   W M+LQ+AL+    HLS+Y L +E GT+F ++   G
Sbjct: 137 RAQGELSSWSLDLIQSLPGATAEHWRMQLQQALALEPPHLSVYDLIVEPGTVFERLESSG 196

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           +L LP E+++ DL  LT    +A G   YEISN++  G  S HN  YW    + G G GA
Sbjct: 197 ELQLPEEDLSADLMELTAGTLAAAGFGHYEISNYALPGHASRHNRVYWSGAGWWGFGMGA 256

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA--DEFLMMGLRLREG 340
                     V     +  E +   ++++         L   Q    DE +M+GLR REG
Sbjct: 257 ----TAAPWGVRQPRPRTREGYAAWLQQDPG------ELGPPQPMPNDERVMVGLRRREG 306

Query: 341 ISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIAN 392
           + +     LAG +    ++  +    +G + R +  R R +   G+ + ++V+  
Sbjct: 307 VLLTPL--LAGLDPAGLMQRWQPYLERGLLRR-EGQRWRLSDPEGLALSNAVLRE 358


>gi|308062505|gb|ADO04393.1| coproporphyrinogen III oxidase [Helicobacter pylori Cuz20]
          Length = 345

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 166/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIYRNARLSMDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N  + I        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNAIKEILEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  H+L YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    + L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCALGVELNF--------LDENKVKFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|109948127|ref|YP_665355.1| coproporphyrinogen III oxidase [Helicobacter acinonychis str.
           Sheeba]
 gi|109715348|emb|CAK00356.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           acinonychis str. Sheeba]
          Length = 350

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/368 (30%), Positives = 173/368 (47%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++++ +E +IQ+   +++   + T    I S+F GGGT
Sbjct: 8   LYIHIPFCNNKCGYCAFNSYENKHEL-KEEYIQALCLDLKHALKQT-HEKIESVFIGGGT 65

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N ++S++ EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 66  PNTLSVKSFERIFESIHQNASLSADCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 125

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ S A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 126 REDKLLFLERQHSKSIAPVIEVIFKSGIENISIDLIYNTPLDNEKSLKEELKLAKELPIN 185

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +   VD  N+ +          YE+SN++   
Sbjct: 186 HLSAYALSVEKNTNLEK--------NAKKPSCVDFDNVVKETLEGFSFKQYEVSNYAR-N 236

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  L+          + E 
Sbjct: 237 YQVKHNLAYWEAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLQR---------QVEP 287

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD      L + G    ++ +RL  + 
Sbjct: 288 LSGKDKRLEKLFLGLRCILGVEISL--------LDAHKVELLIK-GNKAFIKNNRLVASD 338

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 339 --FFMADE 344


>gi|326554660|gb|ADZ89299.1| coproporphyrinogen III oxidase [Brucella melitensis M5-90]
          Length = 458

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 57  SLYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 116

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 117 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 176

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 177 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 236

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 237 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 295

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 296 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 351

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 352 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 411

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 412 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 443


>gi|301335324|ref|ZP_07223568.1| coproporphyrinogen III oxidase [Chlamydia trachomatis L2tet1]
 gi|301336310|ref|ZP_07224512.1| coproporphyrinogen III oxidase [Chlamydia muridarum MopnTet14]
          Length = 457

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/403 (23%), Positives = 171/403 (42%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSI 71
            + S+ L +Y H PFC   C YC     + R +   +++I++ + EM+ +  L G  + +
Sbjct: 43  AKESSPLSLYFHIPFCQSMCLYCGCTVVLNRKEEVVDHYIETLIQEMRLVFSLLGEKKKV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I   + +S+  E+ IE +P S+  + N  +   + G
Sbjct: 103 SRIHFGGGTPSRLSRAQFEHLFTHIQLFFDLSNIEELAIEFDPRSLRPDPNKPKFLHQLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A +L R + F  ++ DLIY LPKQT   ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYNLFRELNFTGINIDLIYGLPKQTQASFK 222

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +Q  L    D L+L+          ++        LPS      +Y+ ++      G 
Sbjct: 223 QTIQHILEMRPDRLALFSFAHVPWAKPHQKALRAK-DLPSMEEKFAIYSQSRHTLIQEGY 281

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
           HA  + + S        +L N     N+  Y      D +G G  A S +      + + 
Sbjct: 282 HAIGLDHFSLPNDPLTLALKNKTLIRNFQGYSLPPEEDLLGFGLSATSFI----RGIYLQ 337

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    +   +     A V+ + LS + +  ++++  L     +S  ++E L     D+
Sbjct: 338 NAKDIREYSTTILSGKLATVKGKILSQDDKIRKWVIHTLMCSFSLSKLEFEQLFHERFDL 397

Query: 357 ECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +      ++  G I R   S LR T  G   +  +    
Sbjct: 398 YFADSYDRLCGMESAGLI-RQDSSSLRVTPLGELFVRVIATAF 439


>gi|146329030|ref|YP_001209018.1| oxygen-independent coproporphyrinogen III oxidase [Dichelobacter
           nodosus VCS1703A]
 gi|146232500|gb|ABQ13478.1| oxygen-independent coproporphyrinogen III oxidase [Dichelobacter
           nodosus VCS1703A]
          Length = 458

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 160/410 (39%), Gaps = 30/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL+  + +   Q    L +Y+H PFC   C YC  N  + + +     ++     +++ 
Sbjct: 37  DYLAQLQES--NQHKKDLSLYIHIPFCTHVCYYCACNKIITQKREHAAAYLDYLRRDIER 94

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVE 118
               +   R +  +  GGGTP+ + P+  + ++  +  ++T   +   E++IE +P +V+
Sbjct: 95  QSAHIDASRKVVQLHLGGGTPTFLTPEQQSDLMAFLYDHFTFASAEESELSIEIDPRTVD 154

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  R+ G NR+S G+Q  +E   + + R     E    ++ AR   +  +S DLIY
Sbjct: 155 KAYLAHLRQLGFNRLSFGIQDTQEAVQKVVNRVQPLEEIAQLMNEARALAYQSLSVDLIY 214

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT  ++   L+  +    D L++Y       TLF    +     LP  +  + +  
Sbjct: 215 GLPLQTPARFAKTLEDVVRLNPDRLAVYNYAHMP-TLFGAQKQINADDLPDSHSKLAILE 273

Query: 238 LTQSITSAHGLHAYEISNHSFL-----GAESLHNL--NYWRYG-----DYIGIGPGAHSR 285
            T +  +  G     + + +         +    L  N+  Y      D +G G  A S+
Sbjct: 274 TTINQLTGAGYEFIGLDHFAKPEDTLVTHQKNGTLYRNFQGYSTFSQCDLLGFGISAISQ 333

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           V    H      EK  +++ + + +    V+    L+ + +     +M +     + +  
Sbjct: 334 V----HHCYSQHEKSRQNYYQALDEQRLPVMRGIMLTLDDRMRRDAIMQIMCNLRLDLAQ 389

Query: 346 WEMLAGRNLDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSV 389
             +   R+         Q+         IE    + +     G   + ++
Sbjct: 390 LSIHYQRDAQKCFAPEWQQLTTFADDALIELTAETLIVL-PVGRLFIRNI 438


>gi|260564161|ref|ZP_05834646.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|260151804|gb|EEW86897.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
          Length = 450

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|319943099|ref|ZP_08017382.1| oxygen-independent coproporphyrinogen III oxidase [Lautropia
           mirabilis ATCC 51599]
 gi|319743641|gb|EFV96045.1| oxygen-independent coproporphyrinogen III oxidase [Lautropia
           mirabilis ATCC 51599]
          Length = 510

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 145/403 (35%), Gaps = 26/403 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QL 65
            +N    Q    + VYVH PFC   C YC  N    R       ++Q+   E++     L
Sbjct: 42  LDNRTLRQPGQPVTVYVHIPFCESICHYCACNRIGTRDHARAVAYLQTLKQEIRLYAAHL 101

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                IS +  GGGTP+    + +A +L+ +     + S  E +IE +P +V+       
Sbjct: 102 HRDVRISQLHLGGGTPTFFSDEELAELLNTLDAEIGLQSQAECSIEIDPRTVDNTRLTNI 161

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R+ G +RISLGVQ L+ +    + R       +  +  AR + F  ++ DL+Y LPKQT+
Sbjct: 162 RRMGFDRISLGVQDLDPKVQVAIHRIQPEEMLVGLMEHARTLDFKSINIDLVYGLPKQTL 221

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                 L R  +     +++Y         F          LP + + + +  L     +
Sbjct: 222 ETLAHTLDRIAALRPGRMAIYGYAHLPE-RFKAQRLIHREDLPDQAMRMAMVQLAIQKLN 280

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHR 292
             G     + + +                 N+  Y      D IG+G  A S +     +
Sbjct: 281 QAGYRYIGMDHFALPDDDLAVALERGTLRRNFMGYTAMPGDDLIGLGVSAISAIGPSYSQ 340

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 +  + W + +            L  +      ++M L  +  +  +        
Sbjct: 341 NH----RELKPWRQAIEAGRLPTARGIELRGDDTLQRAVIMELMCQGQLDFQSIGDRFLI 396

Query: 353 NLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSV 389
           +        L+        G + R +   ++ T  G   L S+
Sbjct: 397 DPQEYFRHELEGLQRFIEAGLVLRDESG-IQVTPVGRYFLRSI 438


>gi|317178479|dbj|BAJ56267.1| coproporphyrinogen III oxidase [Helicobacter pylori F30]
          Length = 345

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 164/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ +  E ++Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYEDKHGLKGE-YVQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKSFERIFESIYHNAHLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +       N  + +        YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCTHFDNAIKEVLEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    R L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVEL--------IFLDENKVRFLIEENK-AFIKNDRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|298491985|ref|YP_003722162.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
 gi|298233903|gb|ADI65039.1| oxygen-independent coproporphyrinogen III oxidase ['Nostoc azollae'
           0708]
          Length = 460

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 157/406 (38%), Gaps = 30/406 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-P 68
             + +  ++L +Y H PFC   C +C  N+ +   K   + ++ + + E+    +L    
Sbjct: 48  AASNERQSALSLYFHIPFCQTACYFCGCNTVISNNKNIAKAYLHNLVQEIHNTAELIDTS 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R +  + +GGGTP+ +E   +  + + I + +T+ S+ E++IE NP  V     Q  R  
Sbjct: 108 RKVLQVHWGGGTPNYLELDQVEFLWNKINRYFTIDSSAEVSIEINPRYVNKEYIQFLRDI 167

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRIS G+Q L  +    + R         A+   +   F  ++ DLIY LP QT+  +
Sbjct: 168 GFNRISFGIQDLNPKVQAAVNRIQPEKMLFDAMGWIKEANFSSVNVDLIYGLPYQTLHTF 227

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  +++ +    D + ++           +     D  LP+    +D+  +T    + + 
Sbjct: 228 QETVEKTIILDPDRIVVFNFAYVPWMKPVQKRISQD-TLPAAQEKLDILKMTIEELTNNE 286

Query: 248 LHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                + + +    E   +  N     N+  Y      +  G G  + S ++    +   
Sbjct: 287 YLFIGMDHFAKTNNELAIAQRNGTLKRNFQGYTTHAETELFGFGSTSISMLEDAYAQNH- 345

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              K  + + + V        +   L+        ++M +     +   D E     N D
Sbjct: 346 ---KSLKDYYQAVSAGVIPTSKGIKLTQNDIIRRDVIMSIMSHFQLHKSDIEDKYHINFD 402

Query: 356 IECERNLQRQGFIERVQFSRLR--------CTQRGMTMLDSVIANL 393
               + L+    ++ ++   L          T  G  ++ ++  N 
Sbjct: 403 EYFSQELEE---LKPLEGDGLVNLFTNQIEITDIGRLLVRNIAVNF 445


>gi|332674027|gb|AEE70844.1| possible coproporphyrinogen dehydrogenase [Helicobacter pylori 83]
          Length = 352

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I S+F GGGT
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESVFIGGGT 67

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 68  PNTLSVESFERIFESIYRNARLSLDCEITTEANPELITKAWCQGLKDLGINRLSLGVQSF 127

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P  +    + EL+ A    ++
Sbjct: 128 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDSENSLKEELKLAKELPIN 187

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N  + I        YE+SN++   
Sbjct: 188 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNAIKEILEGFSFKQYEVSNYAR-N 238

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  H+L YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 239 YQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 289

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    R L  +     ++  RL  + 
Sbjct: 290 LSEQDKRLEKLFLGLRCALGVELSL--------LDENKVRFLIEENK-AFIKNDRLIASD 340

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 341 --FFMADE 346


>gi|190573675|ref|YP_001971520.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia K279a]
 gi|190011597|emb|CAQ45216.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas maltophilia K279a]
          Length = 469

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 90/398 (22%), Positives = 160/398 (40%), Gaps = 30/398 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q + +L +YVH PFC   C YC  N  + R +    +++   L E   +  Q    R 
Sbjct: 55  SNQLARALSLYVHVPFCSSPCFYCGCNRVITRDRGRGHSYVSRVLAEADLLAPQFEDGRE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++ + +  +++G+ + +  S     + +IE +P  ++  +     + 
Sbjct: 115 VIQLHLGGGTPNFLDAEAMTTLVEGLRRRFDFSDSPQRDFSIELDPRFIDTRDVAMLARL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQW 187
           G NR SLGVQ  + Q    + R     + +  +   R+   R ++ DLIY LP Q++  +
Sbjct: 175 GFNRASLGVQDFDPQVQESINRIQGVQQTLDILRACRDSGMRSVNVDLIYGLPGQSLEGF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+R L+   D L++Y        LF    +  +  LPS    + L  L     SA G
Sbjct: 235 GRTLERVLALRPDRLAVYGYAHLPH-LFRAQKQIDESRLPSPEDKLALLGLAVDKLSAAG 293

Query: 248 LHAYEISNHSFL--------GAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
                + + +           A  LH  N+  Y      D +G+G  A S +     +  
Sbjct: 294 YQYIGMDHFALPEEDLSRAQRAGQLHR-NFMGYTTHADTDLLGLGVSAISHIGATYSQN- 351

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               +   SW   V +    V     LS++ Q    L+  L  +  +         G + 
Sbjct: 352 ---PRDLASWEDAVDQGQLPVWRGVALSADDQLRAELIQQLMCQGEVDGAVLGQRHGVDF 408

Query: 355 ------DIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
                 D+   + LQ  G  E      +R ++ G  +L
Sbjct: 409 QQYFAEDLRSVQRLQEDGLAEYRD-GVVRASEPGRPLL 445


>gi|154148980|ref|YP_001407207.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
 gi|153804989|gb|ABS51996.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           hominis ATCC BAA-381]
          Length = 452

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 88/407 (21%), Positives = 158/407 (38%), Gaps = 23/407 (5%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            +Y               L +Y H PFC   C +C  N            ++     EMQ
Sbjct: 30  FRYEEYVNELKAQAQETPLSLYFHMPFCRSACYFCGCNVIYTSKSEKMHRYLDYMNKEMQ 89

Query: 61  WMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVE 118
            +  +    R ++ + FGGGTP+  +   +   +  I K +   + + EI+ E +P  + 
Sbjct: 90  ILSGIIDTSRVVTQMHFGGGTPTYYDADELDFHIKNIKKYFKNFAKDAEISCEIDPRFLN 149

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIY 177
                   K G NRIS GVQ   E+  + + R         AI LA +     ++ DLIY
Sbjct: 150 EEQLDVLVKHGFNRISYGVQDFNEKVQKVIHRVQPYEMTKNAIDLARQKGIKSINTDLIY 209

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  ++  L+ AL+  VD  +++        +   M K  +  LPS  V +++  
Sbjct: 210 GLPYQTLESFKETLRLALTLDVDRFAIFNYAHVP-WIKKSMRKFDETTLPSPKVKLEILK 268

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSR 285
            T    +++G     + ++S    E   +L N     N+  Y      D IGIG  +   
Sbjct: 269 FTHDFLTSNGYKMIGMDHYSKPTDELHAALENGTLHRNFQGYTTKGGADLIGIGLTSIG- 327

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                 R      K    + K + +      +   L+SE    + ++MGL     + +K 
Sbjct: 328 ---EGKRYYAQNFKDMPLYEKAIDEGILPFFKGILLNSEDLLRKDVIMGLMSNFRVDIKK 384

Query: 346 WEMLAGRNLDIECERNLQRQGFI---ERVQFSRLRCTQRGMTMLDSV 389
            E     +      ++L+    +     +   ++  TQ G  ++ ++
Sbjct: 385 IESKFNIDFFEHFAKSLKELEKLNDFVEISPEKISVTQTGTLLIRNI 431


>gi|254718797|ref|ZP_05180608.1| coproporphyrinogen III oxidase [Brucella sp. 83/13]
 gi|265983778|ref|ZP_06096513.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           83/13]
 gi|306837517|ref|ZP_07470392.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
 gi|264662370|gb|EEZ32631.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           83/13]
 gi|306407409|gb|EFM63613.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp. NF
           2653]
          Length = 444

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/393 (21%), Positives = 151/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAVREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQAVLAAIRTAFDFDPSMEHAIELDPRTVTPLLVKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +    ++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  +G GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLVGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|13475345|ref|NP_106909.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14026097|dbj|BAB52695.1| coproporphyrinogen III dehydrogenase [Mesorhizobium loti
           MAFF303099]
 gi|20803862|emb|CAD31440.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE PROTEIN
           [Mesorhizobium loti R7A]
          Length = 441

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/417 (20%), Positives = 163/417 (39%), Gaps = 37/417 (8%)

Query: 6   AYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           AYE  +    +N    +Y+H PFC  KC YC F + + R+     N++ +   E++ + +
Sbjct: 31  AYEEWLRNLPANDPASLYLHVPFCRSKCWYCGFPTTITRHDAPIVNYLAALRDEIRLVSE 90

Query: 65  L-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                  +S + FGGGTP+L+ P     + + + +++ ++    I +E +P +   +  +
Sbjct: 91  HAPQALPVSDVHFGGGTPTLMGPVEFLALTEFLRRHFALAETATIAVEIDPRTFTADMAE 150

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
             + AGVNR SLGVQS +    + + R  + ++  AA+ + R      ++FDLI+ LP Q
Sbjct: 151 ALQAAGVNRASLGVQSFDPIVQKAINRVQSEAQTAAAVEMLRRHGVTSINFDLIFGLPHQ 210

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+       + A++   + L+++  +    +         +  LP      +        
Sbjct: 211 TVQSCVETTRAAVAMRPNRLAVFGYSHIP-SFIKNQRLIEEASLPGSAARAEQDAAIAVT 269

Query: 243 TSAHGLHAYEISNHSFL----------GAESLHNLNYW--RYGDYIGIGPGAHSRVKVGS 290
             A G     + + +            G    ++L Y        IG G  A  RV  G 
Sbjct: 270 LIAAGYREIGLDHFALPDDDLALAQKTGRLRRNSLGYSADTCKTLIGFGASAIGRVGEGY 329

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +  ++     +S+ + +     A  +   L+ E +A   ++  L       V       
Sbjct: 330 VQNEVTR----DSYCRHIAAGRLATSKGYRLTDEDRARAAIIERLMCDLEADVPAICAAH 385

Query: 351 GRNL-----DIECERNLQRQGFIERVQFSRLRCTQRGMT-----------MLDSVIA 391
           G +        E    L + G I  ++   +R  ++               LD V  
Sbjct: 386 GSDPIHFLDSAERLAMLAKDG-IVDIEKGFVRVRRQHRFAMRVVAAAFDAFLDRVAR 441


>gi|317182475|dbj|BAJ60259.1| coproporphyrinogen III oxidase [Helicobacter pylori F57]
          Length = 345

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ +  E ++Q+   +++     T    I S+F GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYEDKHGLKGE-YVQALCLDLKHALSQT-DEPIESVFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKSFERIFESIYRNASLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENVSIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L++EK T   K           +    +  N+ + +        YE+SN++   
Sbjct: 181 HLSAYALSVEKNTNLEK--------NAKKPSCTNFDNIIKEVLEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  H+L YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QIET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS + +  E L +GLR   G+ +          LD    + L  +     ++  RL  + 
Sbjct: 283 LSEQDKRLEKLFLGLRCVLGVELSF--------LDENKAKFLIEENK-AFIKNGRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|256112100|ref|ZP_05453036.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265993540|ref|ZP_06106097.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764410|gb|EEZ10442.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 450

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 147/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDQPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H++ +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQIIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|220922097|ref|YP_002497398.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
 gi|219946703|gb|ACL57095.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           nodulans ORS 2060]
          Length = 456

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 135/364 (37%), Gaps = 19/364 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           +       Y+H PFC + C YC  ++ V R     E ++ +   E+  +      R  + 
Sbjct: 48  RDGEEFSAYIHVPFCAELCLYCGCHTKVVRRYGPVEAYVAALEREIDLVSDRLAGRPTLR 107

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+++   ++  +++ +   +  + ++EI +E +P ++   + +     GV R
Sbjct: 108 HLHWGGGTPTMLRGSDMRRLVERLRGRFAFAPDIEIAVEIDPRTLTPAHVETLAAIGVTR 167

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQSL+ +  R + R  + +E    +     +    ++ DL+Y LP QT+      +
Sbjct: 168 ASLGVQSLDPEVQRTIRRIQSVAETARVVEWLRFSGIDAVNVDLMYGLPHQTVENVVATV 227

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              +  A D ++++        +        +  +P     +  +          G    
Sbjct: 228 DHVVGLAPDRVAVFGYGHVP-WMKPHQRALPEAAMPGTRERLAQFEAAALQLGRAGYVRV 286

Query: 252 EISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +          A      N+  Y     G  IG G  A S +  G  +    I  
Sbjct: 287 GLDHFARPDDPLALAMAAGRLRRNFQGYTTDATGTLIGFGASAISSLPQGYAQNLADI-- 344

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
              ++   VR+   A      ++ E +    ++  L       +       G       E
Sbjct: 345 --AAYEDAVRQGRLATARGLVMTPEDRLRREVIERLMCDFAADLDAICDRHGVAAAAVFE 402

Query: 360 RNLQ 363
           R L 
Sbjct: 403 RELA 406


>gi|62318012|ref|YP_223865.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|83269988|ref|YP_419279.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|189023264|ref|YP_001933005.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|254691555|ref|ZP_05154809.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254695149|ref|ZP_05156977.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|254698249|ref|ZP_05160077.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731692|ref|ZP_05190270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|256256741|ref|ZP_05462277.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260544199|ref|ZP_05820020.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260757180|ref|ZP_05869528.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260759451|ref|ZP_05871799.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260762695|ref|ZP_05875027.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882988|ref|ZP_05894602.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|261215505|ref|ZP_05929786.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|62198205|gb|AAX76504.1| HemN-2, oxygen-independent coproporphyrinogen III oxidase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940262|emb|CAJ13327.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator
           protein 3/MiaB/NifB:Radical SAM [Brucella melitensis
           biovar Abortus 2308]
 gi|189021838|gb|ACD74559.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus S19]
 gi|260097470|gb|EEW81344.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260669769|gb|EEX56709.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260673116|gb|EEX59937.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677288|gb|EEX64109.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260872516|gb|EEX79585.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260917112|gb|EEX83973.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
          Length = 450

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGEPPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|296273195|ref|YP_003655826.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097369|gb|ADG93319.1| oxygen-independent coproporphyrinogen III oxidase [Arcobacter
           nitrofigilis DSM 7299]
          Length = 455

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 154/397 (38%), Gaps = 25/397 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
             S +L +Y+H PFC   C +C  N      +  +  +++    E++ + +     R ++
Sbjct: 43  DSSRNLSLYLHLPFCRSACYFCGCNVIFTSKEDKKVRYLEYVQKELKLLEKYVDTSRKVT 102

Query: 73  SIFFGGGTPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P+ +  ++          SS+ EI+ E +P      +    +K G N
Sbjct: 103 QMHFGGGTPTYFSPEQLDEVISMIKRSFPNFSSDAEISCEVDPRYFTKEHMDVLKKGGFN 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ L+E+  + + R          +++AR      ++ DLIY LP Q    +   
Sbjct: 163 RLSFGVQDLDEEVQKTIHRIQPYETTQNVMNIAREAGIKSINIDLIYGLPHQNRETFNET 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + L    D  +++        L   M K  +      +  + +   T    +++G   
Sbjct: 223 LHKILELDADRFAVFNYAHVP-WLMKTMRKFDETTFAPPSEKLLILKDTIDFFTSNGYKM 281

Query: 251 YEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +  G E       S  + N+  Y      D IGIG  +                
Sbjct: 282 VGMDHFAKEGDELFKAIEKSELHRNFQGYTTKGGADLIGIGVTSIG----DGVNYYAQNY 337

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K  + + + +        +   LS++ Q  +F++M L     +++K  E     +     
Sbjct: 338 KDLKQYEEALDNGMLPTFKGYKLSADDQLRQFVIMELMSNFSLNIKRVEDKFDIDFFEYF 397

Query: 359 ERNLQR-QGFIE----RVQFSRLRCTQRGMTMLDSVI 390
           + ++     FIE     +    ++    G  ++ ++ 
Sbjct: 398 KEDVDALDEFIEAELMTLDKEFIKVNPTGAMLIRNIC 434


>gi|222148496|ref|YP_002549453.1| coproporphyrinogen III oxidase [Agrobacterium vitis S4]
 gi|221735482|gb|ACM36445.1| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           vitis S4]
          Length = 450

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 154/402 (38%), Gaps = 24/402 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           ++ GQG   + +Y+H P+C + C +C  ++           ++ +   E++   +  G  
Sbjct: 40  SLLGQGQT-ISLYIHIPYCDRLCWFCACHTKHTLKYEPITAYLTALFREVENTARFVGRE 98

Query: 70  SISS-IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           ++ + +  GGG+P+++ PQ++  ++D +  N+T + + EI++E +P+ ++   +      
Sbjct: 99  AVVTAVHLGGGSPTMLRPQDMVALIDRLRANFTFADDAEISVEMDPNDLDEARYDALASI 158

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           G+ R SLGVQ  +    + + R     +  + +   R      ++ D++Y LP QT+   
Sbjct: 159 GLTRASLGVQDFDPVVQKAINRLQTFEQTKSVVEQVRLRGATSVNCDILYGLPYQTLESL 218

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  +   +S   D ++L+        +        +  LP   +  +      ++    G
Sbjct: 219 EKTVLDIVSLKPDRIALFGYAHVP-WMKKHQTLIPESALPDIVMRYEQMVRASAMLVEAG 277

Query: 248 LHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAI 295
             A  I + +           +     N+  Y        IG+G  + S++  G  +   
Sbjct: 278 YDAIGIDHFALPEDSLAVAARQKRLRRNFQGYTTDGADALIGLGASSISQLPQGYVQNMP 337

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +       + ++V +NG A      LS + +    ++  +    G S  D         +
Sbjct: 338 AT----GEYQRLVSENGLAATRGIALSGDDRVRAAVIEQIMCEFGFSFADIRQAFPDVAE 393

Query: 356 IECERN----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                           + R+       T  G     S+ A  
Sbjct: 394 DVIAEAKIFTASNGDDLCRIDRECFTLTPTGRLFARSIAATF 435


>gi|237750436|ref|ZP_04580916.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
 gi|229373966|gb|EEO24357.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
          Length = 459

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 79/407 (19%), Positives = 156/407 (38%), Gaps = 27/407 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L ++    +      L +Y H PFC   C +C  N      +  +E +I+    E+  ++
Sbjct: 39  LESFNRADSKYRDKDLSLYTHLPFCKSACYFCGCNVIYTSKEDKKERYIKYLEKELALLK 98

Query: 64  Q-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNN 121
             +   R ++   FGGGTP+  + + +  I   I       S + EI+ E +P     + 
Sbjct: 99  DSMDTKRKVAQFHFGGGTPTFFDAKQLQTITQMIRHTFPNFSESCEISCEIDPRHFSEDQ 158

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
            +  +  G NRIS GVQ  +++  + + R    S   +++ LAR      ++FDLIY LP
Sbjct: 159 MRVLKDCGFNRISFGVQDFDDKVQQHINRIQPFSLVESSVTLARKYGIDSINFDLIYGLP 218

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q+   +   L+  +  + + L+++        +   M K  +  LPS    + +   T 
Sbjct: 219 YQSEKSFANTLESVIKLSPERLAIFNYAHVP-WVKKSMRKIDETTLPSPEEKLKILQNTI 277

Query: 241 SITSAHGLHAYEISNHSFL-----GAESLHNL--NYWRYG-----DYIGIGPGAHSRVKV 288
               A+      + + +        A++   L  N+  Y        IGIG  +      
Sbjct: 278 EFLHANDYEMIGMDHFAKKSDSLSIAKNKGELRRNFQGYTTKGFSQTIGIGLTSIG---- 333

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                     K   S+   +  N   V +   LS E    + ++M L     +  K    
Sbjct: 334 EGVDYYTQNHKDMMSYENSLDNNTLPVAQGILLSPEDILRKEVIMSLMNNAKLDFKAINE 393

Query: 349 LAGRN------LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             G +       + E  + +   G +  +  + ++ +  G  ++ ++
Sbjct: 394 SFGIDCITHFSSEFESLKPMCELGLLT-IDSNSIQVSATGKMLIRNI 439


>gi|330876057|gb|EGH10206.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 460

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 152/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E++
Sbjct: 38  FELLHALRES--RKALRPLSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIR 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHDELRRLMARLRTHFTLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+SLGVQ L+    R + R  +  +  A +  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEDTRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP  +  + + 
Sbjct: 216 YGLPRQTPQGFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDAADLPDAHTKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +  G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLTNAGYRYIGMDHFALPDDELAIAQEELTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          + +++  +  A       S + +    ++  L     ++  
Sbjct: 335 QVGD----LYSQNSSDLTDYQRLLDSDQPATRRGLICSEDDRIRRAVIQQLICHFTLNFS 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I     + +     G  ++ SV 
Sbjct: 391 ELEKAFTISFRDYFADAWPHLLCMANDGLITLSDGA-IEVRPAGRLLVRSVC 441


>gi|297250097|ref|ZP_06933798.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|297173966|gb|EFH33330.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 458

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 57  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 116

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P  +  ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 117 GTPTIIQPDELVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 176

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 177 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 236

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 237 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 295

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 296 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 351

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 352 SCVASGEPPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 411

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 412 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 443


>gi|90423137|ref|YP_531507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris BisB18]
 gi|90105151|gb|ABD87188.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB18]
          Length = 387

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 97/394 (24%), Positives = 174/394 (44%), Gaps = 14/394 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT--EMQWMRQLT 66
             +     N   +Y+H PFC   C +C F    +  K   + F  + L   +++      
Sbjct: 1   MALPPLAWNHYSLYLHVPFCRAICTFCTFE-RTQYSKSSMDAFFDALLDEVDLREQSDDF 59

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
              ++ SI+ GGGT SL+  + I+  L  +   + +  ++E T+E  P +   ++F+  R
Sbjct: 60  TQATLDSIYLGGGTASLLSNEQISQFLGRLRSGFGLHDDIECTLECEPGTKREDDFREVR 119

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
            AGVNR+S+GVQS  +Q L  L R H  + +   I  A N  F  +  DL+Y LP QT+ 
Sbjct: 120 DAGVNRVSIGVQSFSDQLLPALNRRHTVATSYRTIEAAHNAGFSNIHIDLMYGLPNQTLA 179

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITS 244
            W+  +  A+   + H+S+Y+L I +  L  +    G+L  P++     ++         
Sbjct: 180 DWKFSVNEAIRLGIQHVSVYRLIIFQDELLARKLGQGELQPPADAGTIEEMRRYALETLP 239

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           A+GL  Y ++  +  G E ++    W   DY+G GP A+SR     H    ++  H   +
Sbjct: 240 ANGLRQYSLTEFAKPGNECIYVQRNWDGSDYLGFGPAAYSR--HAHHLWENTVFHH--RY 295

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---N 361
            ++   +   V +   ++  +     + MGL     + +   E  +G +LD    R    
Sbjct: 296 HELTDDHRLPVGKGITMTPHECLARDVAMGL-CLLSVDIAHVERQSGASLDEIFGRKIAQ 354

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           L   G + R +  R+  T  G+     ++     
Sbjct: 355 LVDDGLLRRTR-DRIYLTDEGLLYATYIMKRFTA 387


>gi|317013009|gb|ADU83617.1| coproporphyrinogen III oxidase [Helicobacter pylori Lithuania75]
          Length = 345

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 165/368 (44%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I +N  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIHRNARLSLDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +    +  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSCTNFDNVIKEALEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  +K          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVADERFYAKKLIENYIKDPIKR---------QIET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           L+ + +  E L +GLR   G+ +  +         IE  +   +         +RL  + 
Sbjct: 283 LNKQDKRLEKLFLGLRCVLGVELS-FLDKNKVKFLIEENKAFIKD--------NRLVASD 333

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 334 --FFMADE 339


>gi|118475057|ref|YP_892276.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414283|gb|ABK82703.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 346

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 170/370 (45%), Gaps = 32/370 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KCPYC F SH  ++ + +  +  +  +E++    L   + IS+IF GGGT
Sbjct: 3   IYIHIPFCESKCPYCAFGSHSDKFSLTK-RYFSALKSEIK-ESILNLNKKISTIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +E    + I + I     ++ N EIT EANP+S  +      R+ GVNR+S G QS 
Sbjct: 61  PSSVEAGFYSDIFEIIK--PKLAKNCEITTEANPNSASLKWLLEMRELGVNRVSFGAQSF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ LGR H+ +    A+  A+   F  ++ DL+Y     T      E++   +  +
Sbjct: 119 NEKKLKLLGRIHSKNGISKAVQNAKIAKFNNINIDLMYGTKLDTKKLILTEVENIFNLNI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L +E+ T F++            +       + Q      G   YEISN    
Sbjct: 179 SHVSAYSLMLEENTPFFERINLKK------DSPALAKFMIQE-LENIGHKQYEISNF--- 228

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G   LHN+ YW+  DY+G G  A   +         ++E + ++ L+            E
Sbjct: 229 GKPCLHNIGYWKQKDYLGFGAYAVGTIGEKRFYSTPNLEAYIKNPLEK---------SVE 279

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            LS   + +E + +GLR   G+ + +       +L ++    L ++  I  ++  R+   
Sbjct: 280 NLSKNDKLNEHIFLGLRSIVGVKISNLN-----DLQLQKANILAKKNRI-YIKNGRIF-- 331

Query: 380 QRGMTMLDSV 389
            +   + D +
Sbjct: 332 NKNFLLSDEI 341


>gi|317014612|gb|ADU82048.1| coproporphyrinogen III oxidase [Helicobacter pylori Gambia94/24]
          Length = 345

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHASLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P       + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIETILKSGIENISIDLIYNTPLDNENSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +  +VD  N+ +          YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSSVDFDNVVREALEGFSFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           L+ + +  E L +GLR   G+ +   + 
Sbjct: 283 LNKQDKRLERLFLGLRCELGVELSLLDE 310


>gi|306841196|ref|ZP_07473912.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
 gi|306288822|gb|EFM60140.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
          Length = 474

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 145/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 73  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 132

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 133 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 192

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 193 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIKAINFDLIYGLPHQTVASCIETVDIAVEM 252

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 253 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 311

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 312 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGEGYHQNIVP----PGLYA 367

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---- 361
             V        +   L++E +    ++  L     + V       G + +   ++N    
Sbjct: 368 SRVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVDVAAVCAAHGFDPEGLMKQNGTLD 427

Query: 362 -LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 428 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 459


>gi|148546842|ref|YP_001266944.1| coproporphyrinogen III oxidase [Pseudomonas putida F1]
 gi|148510900|gb|ABQ77760.1| coproporphyrinogen III oxidase, anaerobic [Pseudomonas putida F1]
          Length = 460

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 154/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L+A   +   +    L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLNALRES--RRAVRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LIACHLDPKQRVEQLHFGGGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +     LPS    +++ 
Sbjct: 216 YGLPKQTPEGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDSNDLPSAAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
           + T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 HATIDQLTAAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +     A       + + +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLNTYQDSLSNAQLATQRGLLCNHDDRIRRAVIQQLICHFELDFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +              LQR G I       +R    G  +  SV 
Sbjct: 391 PIEQAFTLDFRGYFNDLWPELLTLQRDGLISLDDKG-IRILPAGRLLARSVC 441


>gi|213967526|ref|ZP_03395674.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
 gi|301386489|ref|ZP_07234907.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062811|ref|ZP_07254352.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           K40]
 gi|302131310|ref|ZP_07257300.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927827|gb|EEB61374.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. tomato T1]
          Length = 460

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 80/413 (19%), Positives = 155/413 (37%), Gaps = 32/413 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E++
Sbjct: 38  FELLHALRES--RKALRPLSLYVHIPFCANICYYCACNKVITKDRGRAQVYLQRLEHEIR 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   
Sbjct: 96  MLACHLAPSQVVEQLHLGGGTPTFLSHDELRRLMARLRAHFTLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +  +    R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWASMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP  +  + + 
Sbjct: 216 YGLPRQTPQGFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDASDLPDAHTKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAH 283
             T    +  G     + + +    E        +LH  N+  Y      D IG+G  A 
Sbjct: 275 ERTVEQLTDAGYRYIGMDHFALPDDELAIAQEELTLHR-NFQGYTTHGHCDLIGLGVSAI 333

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S+V      +          + +++  +  A       S + +    ++  L     ++ 
Sbjct: 334 SQVGD----LYSQNSSDLNDYQRLLDSDQPATRRGLICSEDDRIRRAVIQQLICHFTLNF 389

Query: 344 KDWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            + E     +              +   G I     S +     G  ++ SV 
Sbjct: 390 SELEKAFAISFRDYFADAWPQLLCMADDGLIALSD-SAIEVRPAGRLLVRSVC 441


>gi|326795429|ref|YP_004313249.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
 gi|326546193|gb|ADZ91413.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas
           mediterranea MMB-1]
          Length = 456

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 150/399 (37%), Gaps = 32/399 (8%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
            + +Y H PFC   C YC  N  V +       +++    EM+     L   R ++ +  
Sbjct: 47  PISLYFHIPFCAHLCYYCACNKVVTKKYDKGAEYVELLAEEMRLRALMLDRDRKVTQLHL 106

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ +   N+  +   + +N+ +    + + +IE +P  V+       ++ G NR+S
Sbjct: 107 GGGTPTFLSVDNMRTLFKHVEENFNLVKDDSQDFSIEIDPREVDNAQLVLLKEFGFNRVS 166

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q  +    + + R  +       +   R   F  ++FDLIY LP QT T +   +  
Sbjct: 167 LGIQDFDPVVQKAIHREQSRELVAKVLDDVRTAGFKSVNFDLIYGLPHQTTTSFMQTIDS 226

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    + +S++       + F    +  D  LPS +  + +   + +     G     +
Sbjct: 227 VIELNPERISVFNYAHLP-SRFAAQRRINDEDLPSADEKMSILKESINALMRAGYRYIGM 285

Query: 254 SNHSFLG-----AESLHNL--NYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +        A+  H L  N+  Y      D I  G  A S++        +      
Sbjct: 286 DHFAKPDDPLAVAQDNHELQRNFQGYTTNANTDLIAFGVSAISKIDGT----YVQNHSDL 341

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------D 355
             +   V     A+++    + +      ++M L     +  ++       N       +
Sbjct: 342 ALYQNSVENGQLAIMKGYISTRDDMIRHDVIMKLMCDFCLDSREISTKYRLNFMHYFTKE 401

Query: 356 IECERNLQRQGFIERVQFSR----LRCTQRGMTMLDSVI 390
           IE    L++ G I R+        +  T  G  ++  V 
Sbjct: 402 IEGLEQLKKDG-IVRIDRETDHIIITVTAVGRLLVRRVC 439


>gi|293630695|gb|AAN51576.2| coproporphyrinogen 3 oxidase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 449

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 177/409 (43%), Gaps = 29/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQ 60
           ++L    N +  + + SL +Y+H PFC   C +C  N+ + +    ++ +I+S  L    
Sbjct: 35  EWLEKVRNRLRFENT-SLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYIESILLEFSN 93

Query: 61  WMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +++++     R +  +  GGGTP+ +  +N+ ++LD I K   +SS  E ++E +P    
Sbjct: 94  YLKEVPEIAKRELKELHLGGGTPTYLSEKNLEILLDSILKKMNLSSKYEFSLEVDPRRTR 153

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +  R  G  RISLGVQ  + +  R + R            L+R +    ++FDLIY
Sbjct: 154 DTQLKILRDFGFKRISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIY 213

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +   +  +++ L    D ++ Y        L        ++ LPS +   +LY 
Sbjct: 214 GLPKQNLQNMKRTIKKTLELRPDRIAFYSYAHVP-WLKASQRLFTEVDLPSGSAKRELYE 272

Query: 238 LTQSITSAHGLHAYEISNHSF--------LGAESLHNLNYWRY----GDY-IGIGPGAHS 284
           +++ +    G     + + +         +   +LH  N+  Y     D  +G+G  A S
Sbjct: 273 VSREMFLKAGYIEIGMDHFALESDSLFQAVKNGNLHR-NFMGYTAKTTDMLLGLGVSAIS 331

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                 H+     EK  + + K +   G A +    L+ E      L++ L     + V 
Sbjct: 332 DSWDCFHQN----EKIVKKYQKRIYSEGFATLRGHKLNEEDLIQRSLILQLSTSGKVIVP 387

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + E+L    L      +++    + R + + L  T++G   L +V  +L
Sbjct: 388 E-EILREVRL---YLASMEDDTLV-RWEGNLLSLTEKGRPFLRNVCTSL 431


>gi|90425297|ref|YP_533667.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB18]
 gi|90107311|gb|ABD89348.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB18]
          Length = 449

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 75/395 (18%), Positives = 138/395 (34%), Gaps = 25/395 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
              + +Y+H PFC + C YC  N  +         ++Q  L E+  +      R  +  +
Sbjct: 44  DEPISLYLHVPFCKQMCWYCGCNMKLASRYEPVATYLQHLLDEIDLLANAMPGRMPVGHV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++EP ++  ++  IA  + +    EI IE++P ++  +        G  R S
Sbjct: 104 HFGGGTPTVLEPDDLGAVMALIADRFRLIEGAEIAIESDPRTLTDDMVDKIGAIGFTRAS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ  + +    + R         A+   R +   +++FDLIY LP QT       +++
Sbjct: 164 FGVQEFDPKVQAAINRIQPPEMVKHAMDRFRAVGVKKLNFDLIYGLPYQTAEDLRRTVEQ 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D ++L+        +        D  LP      +            G     I
Sbjct: 224 CVEMRPDRVALFGYAHVP-WVAKNQRMIPDESLPEPAQRAEQARAAADALVKGGYVRIGI 282

Query: 254 SNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +  G       A    + N+  Y        IGIG  +  R   G  +         
Sbjct: 283 DHFALPGDTLAVAAATGELHRNFQGYTPDASPTLIGIGATSIGRTPSGYVQNISET---- 338

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----I 356
            ++++ V      +        +      ++  +     + +     + G   D      
Sbjct: 339 GAYMRAVEAGKLPIARGHAFKGQDDLRAHVIERIMCDGKVDLNAVGRIFGAAEDWYDGER 398

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           E    LQ+ G +       L  T  G  +   V A
Sbjct: 399 EAIAELQKDGVLT-CANGTLTLTPAGEPLARVVAA 432


>gi|117923344|ref|YP_863961.1| coproporphyrinogen III oxidase anaerobic [Magnetococcus sp. MC-1]
 gi|117607100|gb|ABK42555.1| coproporphyrinogen III oxidase, anaerobic [Magnetococcus sp. MC-1]
          Length = 468

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 78/412 (18%), Positives = 161/412 (39%), Gaps = 31/412 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  A   +        L +Y H PFC   C YC  N  +   +     +++  L E+  M
Sbjct: 44  FRQAVARSQQKDPGKPLSLYFHIPFCDTVCYYCACNKVITPDRARGARYLEYLLQEVARM 103

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEV 119
             L    R +  +  GGGTP+ ++   +  + D +  ++T+  +   E + EA+P  + V
Sbjct: 104 GALFDRKREVVQLHLGGGTPTYLDNGQLQRLWDAVNAHFTLVEDARGEYSFEADPRELPV 163

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
               G RK G+NRIS+GVQ L+    + + R          +  AR+  +  ++ DLIY 
Sbjct: 164 GAVAGLRKMGMNRISIGVQDLDPVVQKAVNRIQPLDLTKRVVDEARDSGYASVNVDLIYG 223

Query: 179 LPKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           LP Q+   +   L+  +     D L+++         F    +  +  LPS +  + +  
Sbjct: 224 LPFQSEAGFRETLRATIEDLDPDRLAVFNYAHLPQ-YFKPQRRINEADLPSPDTKLKILE 282

Query: 238 LTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSR 285
           +   +    G     + + +           + + + N+  Y      D + +G  + S+
Sbjct: 283 MAAQMLVEAGYVYIGMDHFAKPDDELAVAQRQGVLHRNFQGYTTHAECDLVSMGSTSISQ 342

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     +      K  E + + + +   A+ +   L+ +    + ++M +     +  + 
Sbjct: 343 IGNTFAQNI----KELEPYYERIERGELAIFKGLELTEDDMLRQDVIMRMICDFQLDREQ 398

Query: 346 WEMLAGRNLDIEC------ERNLQRQGFIERVQFSRL-RCTQRGMTMLDSVI 390
                  + D          + +  +G IE     RL RCT  G  ++ ++ 
Sbjct: 399 ISKKHHIDFDQYFSVEQEDIKRMVEEGLIE--DDGRLIRCTPGGRLLIRNIC 448


>gi|302184943|ref|ZP_07261616.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           642]
          Length = 460

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 79/412 (19%), Positives = 149/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   + S  L +YVH PFC   C YC  N  + + +   + ++Q    EMQ
Sbjct: 38  FDLLHALRES--RKASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEMQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q    +   + + +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPAQNPQTFSHTVDKIIDLQPDRLSVFNYAHLPE-RFMPQRRIEAADLPDAASKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T     + G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGSAGYRYIGMDHFALPDDELATAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          +L+++  +  A       S + +    ++  L     +   
Sbjct: 335 QVGE----LYSQNSSDLSEYLRLLDSDQPATRRGLLCSDDDRIRRAVIQQLICHFTLDFG 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I       L     G  ++ +V 
Sbjct: 391 EIEKAFCIDFKDYFSEAWPQLLGMASDGLITLSDTG-LEVRPAGRLLVRAVC 441


>gi|255039055|ref|YP_003089676.1| coproporphyrinogen III oxidase [Dyadobacter fermentans DSM 18053]
 gi|254951811|gb|ACT96511.1| oxygen-independent coproporphyrinogen III oxidase [Dyadobacter
           fermentans DSM 18053]
          Length = 454

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 82/409 (20%), Positives = 148/409 (36%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENNMT-GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+     +  T       + +Y+H PFC   C YC  N+ +      +  +IQ+ L E  
Sbjct: 34  KWKELVRDAFTVSNQKEGISLYIHLPFCESLCTYCGCNTRITINHAVESKYIQAVLKEWS 93

Query: 61  WMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              +L G     I  +  GGGTP+   P+N+  ++ G+     V ++     EA+P +  
Sbjct: 94  MYCELFGDEKPVIRELHLGGGTPTFFSPENLVNLVKGLLDKAYVHTDARFGFEAHPGNTT 153

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIY 177
             + +     G  RIS+GVQ      L  + R+    +     +      F  +++D++Y
Sbjct: 154 DAHLEALYSVGFRRISIGVQDFNPVVLAMINRHQTFEQVKHLTLKAREIGFTSVNYDIVY 213

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP+Q        + R +    D ++ Y        +        +  LP  +  + +Y 
Sbjct: 214 GLPQQKNCSMMQTMLRVIQLRPDRIAFYSYAHVP-WIKPGQRSYTEQDLPDADHKMAIYE 272

Query: 238 LTQSITSAHGLHAYEISNHS-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSR 285
             +S     G     + + +           E   + N+  Y D      IG+G  + S 
Sbjct: 273 AGRSALELAGYEDIGMDHFALRTDELYKASTEERLHRNFMGYTDTRTQLLIGLGASSIS- 331

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
               S       EK  E + K +      V     LS E       ++ L      S   
Sbjct: 332 ---DSWWGYAQNEKKVEDYYKKLAAGELPVFRGHELSREDLIMRKHILRLMTGFETSWAS 388

Query: 346 WEMLA-GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              +       +E    ++  G +E V+  RLR T++G   + +V    
Sbjct: 389 TSEVCMEVYQALERLSEMEFDGLVE-VEPFRLRITEKGKAFVRNVCMAF 436


>gi|254699319|ref|ZP_05161147.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261749762|ref|ZP_05993471.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261739515|gb|EEY27441.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
          Length = 450

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 145/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|32474291|ref|NP_867285.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
 gi|32444829|emb|CAD74831.1| coproporphyrinogen III oxidase [Rhodopirellula baltica SH 1]
          Length = 466

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 164/405 (40%), Gaps = 21/405 (5%)

Query: 4   LSAYENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           L   +  M    +  N LG+Y+H PFC K+C +C F           + ++ +   E+  
Sbjct: 59  LDEVKQRMASAPTSENPLGLYLHIPFCRKRCKFCYFKVFTDVKAQEVQRYVDALCNEISM 118

Query: 62  MRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           + QL   G R    ++FGGGTPS + P+ +  + D + ++ T     E+T E  P ++  
Sbjct: 119 VSQLPVMGDRPFRFVYFGGGTPSFLSPKQLTKLADRLREHITWDGAEEVTFECEPGTLSE 178

Query: 120 NNFQGYRK-AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
              +  R+  GV R+SLG+++  ++ L   GR H + +  +A        FP ++ DLI 
Sbjct: 179 TKVKTLREQLGVTRLSLGIENFSDKLLEENGRAHLSKQVFSAWEWIEAAQFPNVNIDLIS 238

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  +T   W+  ++R +  + + +++YQ+ +   T++        +  P  +       
Sbjct: 239 GMVGETWENWKDNIRRTIDMSPESVTIYQMELPFNTVYSADILGNKIQSPVADWQTKRDW 298

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNY----WRYGDYIGIGPGAHSRVKVGSHRV 293
           ++ +            S ++ +      N +Y    WR  D +  G  +        ++ 
Sbjct: 299 VSYAFDEMTSAGYKVSSAYTLVKDTGKVNFSYRDNLWRGADLLATGIASFGHAAGAHYQN 358

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGR 352
                 H E +L  +      +      +  Q     ++  L L+ G +  + ++     
Sbjct: 359 LP----HMEQYLGAIEGGELPLGRGFVPTEHQALIREMI--LLLKRGFLEREYFQSKFDV 412

Query: 353 NL---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++             +G  E +    ++ T+ G+  +DS++    
Sbjct: 413 DIVENWKPVWDGYVEEGLAE-IHADEVKLTREGLLRVDSMLPAFF 456


>gi|24215263|ref|NP_712744.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24196353|gb|AAN49762.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 388

 Score =  242 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 25/384 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G+Y+H+P+C++KC YCDF S       +       + + +   T +             +
Sbjct: 16  GIYIHYPYCIQKCEYCDFYSVGNGKNQIPDETGLFQRYKEEIATRIS-DNPFISDLEFDT 74

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPS  E   I+ ++  +  N   S   EIT+E NP  +  +  +   +AG+NRI
Sbjct: 75  IFFGGGTPSRAEVSKISDLIFFLRNNIKFSKYSEITMECNPEDITPDFLKSIEQAGINRI 134

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS   + L+FLGR ++       +   +N      S DLIY +P QT+ +   ++Q
Sbjct: 135 SVGIQSFHPEKLQFLGRYYDPDRYENVLETVKNSGISNFSADLIYGIPGQTVQEILQDIQ 194

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS    H+SLY LT+EKGT + +   D     P E +   +  L   + S + L  YE
Sbjct: 195 KVLSAGGKHISLYALTVEKGTEYSRKVMDKISPSPEEEIQEKILKLLPDLLSPYELFQYE 254

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN S  G  S HNL YW    Y+GIGPGAH  +  G +    +++ +            
Sbjct: 255 VSNFSKPGFFSKHNLKYWTMEYYLGIGPGAHGFLPSGRYSNPRNVDTYKRK--------- 305

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQGFIE 369
                KE+ +     +E ++   RL + I ++ +  L     + LD++  +  Q  G  E
Sbjct: 306 --NFSKEY-TKPNFYEELILSLFRLFQPILMESFYELIPDQSQTLDLQ-LKKFQESGLCE 361

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
                  +     +  LDS I  L
Sbjct: 362 -FSNGIFQWKPEAVLFLDSKILEL 384


>gi|239933117|ref|ZP_04690070.1| coproporphyrinogen III oxidase [Streptomyces ghanaensis ATCC 14672]
 gi|291441465|ref|ZP_06580855.1| CalE1 [Streptomyces ghanaensis ATCC 14672]
 gi|291344360|gb|EFE71316.1| CalE1 [Streptomyces ghanaensis ATCC 14672]
          Length = 455

 Score =  242 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 89/399 (22%), Positives = 160/399 (40%), Gaps = 20/399 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
             +  ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R+  G R  
Sbjct: 47  AAEPKDALSLYLHIPFCEIRCGFCNLFTRIGAPDGLTGAYLDALERQATAVREALGEREP 106

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D            V +++EA+P++   +  Q   +
Sbjct: 107 VRFATAAFGGGTPTFLTAAELERLCDIAEHRAGADLRAVPLSVEASPATATADRLQVLAE 166

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+SLGVQS ++   R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 167 RGTTRLSLGVQSFDDTEARAAVRPQRRADVEAALGRVRDARIPVLNIDLIYGIDGQTERT 226

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL++  + L LY L I   T   +    GD     ++  + LY L +    AH
Sbjct: 227 WLRSLDAALAWRPEELYLYPLYIRPLTGLGRR--AGDPDPAWDDQRLRLYRLGRDHLLAH 284

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKH----- 300
           G     +       A      +Y    D  IG+G GA S      +    ++  H     
Sbjct: 285 GYRQQSMRMFRRADAPPQGADDYACQTDGMIGLGCGARSYTAGLHYSFDYAVGMHEIRGI 344

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-----RNLD 355
            + ++     +         + +++     L+  L   EG+ V D+    G      +  
Sbjct: 345 VDDYVSRPAADFARAEYGRRIDTDEARRRHLLQSLLQAEGLDVADYRARFGGRTPREDFP 404

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            E  R    +G++      RLR T  G+   D+V   L 
Sbjct: 405 AELSR-FADRGWLA-DDGPRLRLTPEGLAHSDAVGPELF 441


>gi|146300297|ref|YP_001194888.1| coproporphyrinogen III oxidase [Flavobacterium johnsoniae UW101]
 gi|146154715|gb|ABQ05569.1| oxygen-independent coproporphyrinogen III oxidase [Flavobacterium
           johnsoniae UW101]
          Length = 454

 Score =  242 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 83/409 (20%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++ S+++   +   S N + +Y+H PFC   C +C  N  + +    +E +IQ+ L E +
Sbjct: 34  EWKSSFQRAFSESNSQNGISLYIHLPFCESMCTFCGCNKRITKNHTVEEKYIQAVLKEWR 93

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
              +L   R  I  I  GGGTP+     N+  +++GI      + N E + E +P++   
Sbjct: 94  LYCKLLPERPLIKEIHLGGGTPTFFSAHNLEHLINGIFSFANKAENHEFSFEGHPNNTTY 153

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
           +  +     G  R+S GVQ   E+  + + R             A+ I    +  D+I+ 
Sbjct: 154 DQLKRLYDLGFRRVSFGVQDYSEKVQKAINRIQPFHNVAKVTFWAKEIGYTSIGHDIIFG 213

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+      +++  S   D L+ Y                 +  LP +     LY  
Sbjct: 214 LPFQTVEDVIDTVEKTNSVKPDRLAFYSYAHVPWIKGNGQRGFNEENLPKDGEKRKLYET 273

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLH--------NLNYWRY-----GDYIGIGPGAHSR 285
            + + SA+G H   + + + L ++SL+        + N+  Y        IG+G  + S 
Sbjct: 274 GKLLLSANGYHEIGMDHFA-LKSDSLYHSAQNKTMHRNFMGYSASKTQLMIGLGVSSISD 332

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  +      K+ E + +++  N   VV+   LS E       ++ L      S  +
Sbjct: 333 SWYGFAQNT----KNLEDYYQILEWNQLPVVKGHILSDEDLIIRKHILNLTCELETSWSN 388

Query: 346 WEMLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +      ++    + ++    I  ++ ++++ T+ G   + ++    
Sbjct: 389 DSLYFKELPEVLLSLKEIESDQLI-LIEENKIKITEAGRPFVRNICMAF 436


>gi|256059748|ref|ZP_05449943.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261323726|ref|ZP_05962923.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
 gi|261299706|gb|EEY03203.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
          Length = 450

 Score =  242 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 145/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|192362422|ref|YP_001981480.1| coproporphyrinogen III oxidase [Cellvibrio japonicus Ueda107]
 gi|190688587|gb|ACE86265.1| oxygen-independent coproporphyrinogen III oxidase [Cellvibrio
           japonicus Ueda107]
          Length = 463

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 161/403 (39%), Gaps = 28/403 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP- 68
           + + +    L +Y H PFC   C YC  N  V   K     ++   + EM    +L  P 
Sbjct: 48  DRSNRSRRPLSLYFHIPFCDTLCFYCGCNKVVTHNKNRALPYLHRMIQEMALYAELVEPG 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYR 126
           R++  + +GGGTP+ I    ++L++    + +T++   + E ++E +P  V ++  +  R
Sbjct: 108 RTVKQLHWGGGTPTFISTDEMSLLMKSTRRLFTLAPVDDGEFSVEIHPGRVSIDTMRHLR 167

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMT 185
           + G NR+S+GVQ  +E+    + R +   +    ++ L    +  +S DLIY LP Q++ 
Sbjct: 168 QLGFNRVSMGVQDFDERVQVAVNRYNTLDQVSRLVNALREQHYRSISMDLIYGLPMQSLR 227

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             +  L + +    D LS++        LF       +  LP  +  +D+   +     A
Sbjct: 228 SLQDTLHKVIDLQPDRLSIFNYAHLPH-LFKSQQLIHEADLPDASEKLDMLQQSIEQLQA 286

Query: 246 HGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
            G     + + +           E     N+  Y      D +  G  + SR+     + 
Sbjct: 287 TGYVYIGMDHFAKPDDDLAIAQREGRMQRNFQGYSTHGDCDLLAFGVSSISRIDNVYLQN 346

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           A    K   S+ + +  +         L++E Q   F++  L     +   +     G +
Sbjct: 347 A----KELNSYQQKLDMDMLPFERGFTLNTEDQLRRFIINQLICHFHLDFNEVLHQFGVD 402

Query: 354 LDIECERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVI 390
           +     R L+R       G +  +   RL+    G  ++  + 
Sbjct: 403 VRHHFSRELERLTPMVEDGLL-CLDEQRLQVNNAGRMLIRRIC 444


>gi|23500911|ref|NP_700351.1| coproporphyrinogen III oxidase [Brucella suis 1330]
 gi|163845515|ref|YP_001623170.1| coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|254706439|ref|ZP_05168267.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|254711273|ref|ZP_05173084.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|254711874|ref|ZP_05173685.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|256015958|ref|YP_003105967.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|256030098|ref|ZP_05443712.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|256158269|ref|ZP_05456178.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|256252790|ref|ZP_05458326.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|260166852|ref|ZP_05753663.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
 gi|261219871|ref|ZP_05934152.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261313889|ref|ZP_05953086.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261318870|ref|ZP_05958067.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261319505|ref|ZP_05958702.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|261756231|ref|ZP_05999940.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|265987125|ref|ZP_06099682.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
 gi|265996787|ref|ZP_06109344.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|23464582|gb|AAN34356.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           1330]
 gi|163676238|gb|ABY40348.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           ATCC 23445]
 gi|255998618|gb|ACU50305.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|260918455|gb|EEX85108.1| coproporphyrinogen III oxidase [Brucella ceti B1/94]
 gi|261292195|gb|EEX95691.1| coproporphyrinogen III oxidase [Brucella ceti M644/93/1]
 gi|261298093|gb|EEY01590.1| coproporphyrinogen III oxidase [Brucella pinnipedialis B2/94]
 gi|261302915|gb|EEY06412.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M163/99/10]
 gi|261736215|gb|EEY24211.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|262551084|gb|EEZ07245.1| coproporphyrinogen III oxidase [Brucella ceti M490/95/1]
 gi|264659322|gb|EEZ29583.1| coproporphyrinogen III oxidase [Brucella pinnipedialis M292/94/1]
          Length = 450

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 145/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|89890241|ref|ZP_01201751.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BBFL7]
 gi|89517156|gb|EAS19813.1| coproporphyrinogen III oxidase [Flavobacteria bacterium BBFL7]
          Length = 460

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 148/396 (37%), Gaps = 23/396 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SS 73
            +  + +Y+H PFC   C +C  N  +      ++ +I + L E      L     + S 
Sbjct: 53  SNEGISLYIHLPFCEAMCTFCGCNKRITLNHHVEQPYISNVLKEWSLYLALLDETPVISE 112

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+   P N+ L++DGI K+   + N  ++ E +P++    + +   + G NR+
Sbjct: 113 LHLGGGTPTFFSPANLKLLVDGIFKSADKAKNAALSFEGHPNNTTKEHLKTLFELGFNRV 172

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ    +  + + R       + A   AR I    +  DLIY LP Q        ++
Sbjct: 173 SYGVQDYNLEVQKAIHRVQPFENVLNATLNAREIGYKSVGHDLIYGLPFQKKEHVIHTIK 232

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + ++   D ++ Y                    LPS +     Y + + +    G     
Sbjct: 233 QTIALKPDRIAFYSYAFVPWIKGNGQRGFSQENLPSPDEKRAQYEIGKQMLEDAGYIEIG 292

Query: 253 ISNHSFLGAE--------SLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +    E         LH  N+  Y        IG+G  + S    G  +   SI +
Sbjct: 293 MDHFALKSDELNLAMETKKLHR-NFMGYNSSSTQAMIGLGVSSISDSWYGFSQNVKSITE 351

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC- 358
               + +++ ++   V     L+ E       ++ L             L    +     
Sbjct: 352 ----YKELLDQDKIPVYRGHLLNREDLIIRKHILNLMCHFETQWVKNGELYIDEIPDILI 407

Query: 359 -ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             + ++  G +  +  +R+  T++G   + ++    
Sbjct: 408 SLKEMEEDGLL-YLDANRITVTEKGRPFVRNICMAF 442


>gi|13474841|ref|NP_106411.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14025597|dbj|BAB52197.1| coproporphyrinogen III dehydrogenase [Mesorhizobium loti
           MAFF303099]
          Length = 439

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 84/410 (20%), Positives = 148/410 (36%), Gaps = 28/410 (6%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
            AY   + G   ++ + +Y+H PFC   C YC   + + +     +N++ +   E+  + 
Sbjct: 30  EAYGEWLGGLSANDPVSLYIHIPFCRSMCWYCGCPTTITQRDPPNQNYVAALRGEIHLVS 89

Query: 64  QL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +L      +S + FGGGTP+L+EP     + + + + +       I +E +P +      
Sbjct: 90  ELTPQALPVSDVHFGGGTPTLLEPTEFLALTELLRRRFAFRQKTAIAVEIDPRTFTAEMA 149

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
           +    AGVNR SLGVQS +    + + R  +  +   A+  L +    R++ DLIY LP 
Sbjct: 150 EALSAAGVNRASLGVQSFDPSVQKAINRIQSVEQTATAVENLRQQGINRINIDLIYGLPN 209

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QTM         A++     ++++       +  +         LP      +       
Sbjct: 210 QTMQSCVQTATVAVAMRPQRIAVFGYAHTPSSNKH-QRLIEKAGLPDSAARAEQAAAVAE 268

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
              A G     + + +    E            N   Y        I  G  A  RV  G
Sbjct: 269 TLVAAGYREIGVDHFALPDDELALAQKTGRLRRNSQGYSADTCKTLIAFGASAIGRVGEG 328

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
               A +     E++ + +     A  +   L  E +    ++  L       V      
Sbjct: 329 YVENAGA----LEAYSQHIAAGRLATSKGYRLIGEDRVRGAIIERLMCDLEADVPAICAA 384

Query: 350 AGRNL-----DIECERNLQRQGFIERVQFSRLRCTQRG-MTMLDSVIANL 393
            G +        E    L   G I  V+   +R  + G   +L SV A  
Sbjct: 385 HGFDWTHFLDSAERLAMLADDG-IVDVENGFIRV-RHGHRILLRSVAAAF 432


>gi|294853026|ref|ZP_06793698.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|294818681|gb|EFG35681.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
          Length = 458

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 145/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 57  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 116

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 117 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 176

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 177 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 236

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 237 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 295

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 296 LPDDDLSIAQREGRLHRNFQGYTTNACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 351

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 352 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 411

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 412 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 443


>gi|255349141|ref|ZP_05381148.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70]
 gi|255503678|ref|ZP_05382068.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 70s]
 gi|255507358|ref|ZP_05382997.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D(s)2923]
 gi|289525790|emb|CBJ15271.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis Sweden2]
 gi|296435366|gb|ADH17544.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/150]
 gi|296439083|gb|ADH21236.1| coproporphyrinogen III oxidase [Chlamydia trachomatis E/11023]
          Length = 457

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 90/403 (22%), Positives = 167/403 (41%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
            Q  + L +Y H PFC   C YC     + R     +++I++ + EM+    L G  + +
Sbjct: 43  AQEQDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +        G
Sbjct: 103 SRIHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A  L R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++  L    D L+L+          ++        LPS      +Y+ ++      G 
Sbjct: 223 QTIEHILDMRPDRLALFSFAHVPWAKPHQKALRTK-DLPSMEEKFAIYSQSRHTLIQEGY 281

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +L N     N+  Y      D +G G  A S +      + + 
Sbjct: 282 QAIGLDHFSLPDDPLTIALKNKTLIRNFQGYSLPPEEDLLGFGISATSFI----RGIYLQ 337

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    + + ++    A V+ + LS + +  ++++  L     +S  ++E       D 
Sbjct: 338 NVKDLREYSETIQAGKLATVKGKILSQDDKIRKWVIHTLMCSFSLSKLEFEQRFHERFDR 397

Query: 357 ECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +      ++  G I R   S L+ T  G   +  +    
Sbjct: 398 YFADSYDRLCGMESAGLI-RQDSSSLQVTPLGELFVRVIATAF 439


>gi|225628483|ref|ZP_03786517.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
 gi|225616329|gb|EEH13377.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           str. Cudo]
          Length = 458

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 145/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 57  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 116

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 117 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 176

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 177 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 236

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 237 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 295

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 296 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 351

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 352 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 411

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 412 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 443


>gi|262370606|ref|ZP_06063931.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           johnsonii SH046]
 gi|262314406|gb|EEY95448.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           johnsonii SH046]
          Length = 454

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 145/395 (36%), Gaps = 22/395 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISS 73
            +  + +Y+H PFC   C +C  +  V +    ++ +IQ+ L E     +    +  I  
Sbjct: 48  STEGISLYIHLPFCESLCTFCGCHKRVTKKHEMEQPYIQAVLKEWSLYCEWLEEKPRIKE 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+   P ++  +++GI     ++   E + E +P++    + Q     G  R+
Sbjct: 108 IHLGGGTPTFFSPAHLTQLIEGILAQAEIAEQYEFSFEGHPNNTTREHLQALYDLGFRRV 167

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ   E   + + R             AR I    +S DL++ LP Q +      + 
Sbjct: 168 SYGVQDYNETVQKAIHRIQPFEHVEQVTQWAREIGYSSISHDLVFGLPFQNLDDVLNTID 227

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +      D L+ Y                 D  +P + +    Y   ++   A G H   
Sbjct: 228 QTNRLRPDRLAFYSYAHVPWIKGNGQRGFKDHDVPKDEIKRQCYEEGKNKLLAQGYHEIG 287

Query: 253 ISNHSF---LGAES-----LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +       +S     LH  N+  Y        IG+G  + S     S       EK
Sbjct: 288 MDHFALESDAMYQSFQAGILHR-NFMGYTASKTQVMIGLGISSIS----DSWYSFAQNEK 342

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE-C 358
             E +   +  N   V     LS+E       ++ L      S  D  M      ++   
Sbjct: 343 KLEDYYARLENNELPVYRGHILSAEDLMIRRHILNLMCSFQTSWADPSMQFPELAEVLGQ 402

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              ++  G +E ++   +R T++G   L ++    
Sbjct: 403 LEEMRDDGLLE-IRPHSIRVTEQGKAFLRNICMAF 436


>gi|332877771|ref|ZP_08445512.1| coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684351|gb|EGJ57207.1| coproporphyrinogen dehydrogenase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 454

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 155/409 (37%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   +     +N  + +Y+H PFC   C +C  +  + +    +  +I + L E Q
Sbjct: 34  KWLDSLVTSYNESNANEGISLYIHLPFCESLCTFCGCHKRITKRHEVEAPYIDAVLKEWQ 93

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
               +   R  I  I  GGGTP+  +P  +  +++GI +   ++   E + E +P++   
Sbjct: 94  LYTDVLVARPLIKEIHLGGGTPTFFKPSELKRLIEGIFERADIAEQHEFSFEGHPNNTSK 153

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + Q     G  R+S GVQ   E+  + + R             AR I    +S DL++ 
Sbjct: 154 AHLQLLYDLGFRRVSYGVQDYSEKVQKAIHRLQPFENVKRVTDQAREIGYTSVSHDLVFG 213

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+      + ++ +   D ++ Y                 D  +PS  V   LY  
Sbjct: 214 LPFQTLDDVLYTIDKSNTLRPDRIAFYSYAHVPWIKGNGQRGFKDEDVPSGEVKRQLYEE 273

Query: 239 TQSITSAHGLHAYEISNHSFL-----GAESLH--NLNYWRYGD-----YIGIGPGAHSRV 286
            +      G     + + +        A   H  + N+  Y        IG+G  A S  
Sbjct: 274 GKERLLQVGYAEIGMDHFALPTDSMYRAFEQHQLHRNFMGYTASKTQVMIGLGMSAISDS 333

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +     EK  E++ + + KN   V +   L+ E       ++ L  +   S    
Sbjct: 334 WYGFAQN----EKDLEAYYERLEKNEIPVCKGHILNPEDLIIRRHILNLMCQFTTSWAQP 389

Query: 347 EMLAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           E+     +D   ++   +++ G +   +   +  T  G   + ++    
Sbjct: 390 ELQFAE-IDQVLQQLSEMEKDGLLHISEKQ-IDVTDEGKKFIRNICMAF 436


>gi|116327858|ref|YP_797578.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116330742|ref|YP_800460.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116120602|gb|ABJ78645.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124431|gb|ABJ75702.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 387

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 114/383 (29%), Positives = 186/383 (48%), Gaps = 21/383 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMR---QLTGPRSISSI 74
           GVYVH+P+C++KC YCDF S     K    ++N  Q +  E++               +I
Sbjct: 16  GVYVHYPYCIQKCEYCDFYSLGSGKKPIPNEKNLFQRYQEEIRQRISDNPTISNLEFDTI 75

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPS  +   IA ++D +  N  +S   EIT+E NP  +  +  +   +AG+NRIS
Sbjct: 76  FFGGGTPSRADITQIANLVDFLKNNINISEYSEITMECNPEDITPDFLKSIAQAGINRIS 135

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS   + L+FLGR ++++     +   +N      S DLIY +P Q++ +   ++ +
Sbjct: 136 VGIQSFHPERLQFLGRYYDSNRYENILETVKNSEISNFSADLIYGIPGQSIEEILKDVFQ 195

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L     H+SLY LT+EKGT + +   D     P E +  ++  L  ++ S + L  YE+
Sbjct: 196 VLKAGGKHISLYALTVEKGTPYSRKIMDKITPGPEEEIQEEVLKLLPNLLSTYELFQYEV 255

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           SN+S  G  S HNL YW    Y+GIGPGAH  +  G +    ++E +         K  +
Sbjct: 256 SNYSKPGFSSGHNLKYWTMEYYLGIGPGAHGFLPTGRYSNPRNVEAY---------KTKN 306

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML--AGRNLDIECERNLQRQGFIERV 371
              +    +      E ++   RL + IS++ +  L    + +     + ++  G  E  
Sbjct: 307 LSKKY---TKPDLYQELVLSLFRLFQPISMESFYELIPEKKQILNRQLKRMEVSGLCE-F 362

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
                +     +  LDS I  LA
Sbjct: 363 SNGIFQWKPEAVLFLDSKILELA 385


>gi|45657289|ref|YP_001375.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600527|gb|AAS70012.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 388

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 25/384 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSH------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G+Y+H+P+C++KC YCDF S       +       + + +   T +             +
Sbjct: 16  GIYIHYPYCIQKCEYCDFYSVGNGKNQIPDETGLFQRYKEEIATRIS-DNPFISDLEFDT 74

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IFFGGGTPS  E   I+ ++  +  N   S   EIT+E NP  +  +  +   +AG+NRI
Sbjct: 75  IFFGGGTPSRAEVSKISDLIFFLRNNIKFSKYSEITMECNPEDITPDFLKSIEQAGINRI 134

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+G+QS   + L+FLGR ++       +   +N      S DLIY +P QT+ +   ++Q
Sbjct: 135 SVGIQSFHPEKLQFLGRYYDPDRYENVLETVKNSGISNFSADLIYGIPGQTVQEILQDIQ 194

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS    H+SLY LT+EKGT + +   D     P E +   +  L   + S + L  YE
Sbjct: 195 KVLSAGGKHISLYALTVEKGTEYSRKVIDKISPSPEEEIQEKILKLLPDLLSPYELFQYE 254

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +SN S  G  S HNL YW    Y+GIGPGAH  +  G +    +++ +            
Sbjct: 255 VSNFSKPGFFSKHNLKYWTMEYYLGIGPGAHGFLPSGRYSNPRNVDTYKRK--------- 305

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQGFIE 369
                KE+ +     +E ++   RL + I ++ +  L     + LD++  +  Q  G  E
Sbjct: 306 --NFSKEY-TKPNFYEELILSLFRLFQPILMESFYELIPDQSQTLDLQ-LKKFQESGLCE 361

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
                  +     +  LDS I  L
Sbjct: 362 -FSNGIFQWKPEAVLFLDSKILEL 384


>gi|126665806|ref|ZP_01736787.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
 gi|126629740|gb|EBA00357.1| coproporphyrinogen III oxidase [Marinobacter sp. ELB17]
          Length = 503

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 77/409 (18%), Positives = 155/409 (37%), Gaps = 33/409 (8%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A  +  TG     L +Y H PFC   C YC  N  + + +   + ++Q  L E     +
Sbjct: 86  AAARSKATG---RPLSLYTHIPFCAHLCYYCACNKVITKKRNNAQPYVQRLLKEAAMQAE 142

Query: 65  LTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNN 121
           L G  R +  +  GGGTP+ +    +  ++ G  + + + ++   + +IE +P  V+ + 
Sbjct: 143 LFGADRPVKQLHLGGGTPTFLPRDVMRELIHGYGELFNLQTDGSHDYSIEIDPREVDQDT 202

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALP 180
                + G NRISLGVQ +  Q  + + R  +       ++ AR   F  ++ DLIY LP
Sbjct: 203 LSTLWELGFNRISLGVQDVNPQVQKAVNRVQSKEMTRGVLNEARRLGFGSINLDLIYGLP 262

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +   L+  +  + D LS++         FY   +     +P+    + + + T 
Sbjct: 263 YQTPDSFAATLEEVIDMSPDRLSVFSYAHLPE-RFYPQTRLKGDTMPTPQQKLTILHNTI 321

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
           +     G     + + +               + N+  Y      D + +G  A  +   
Sbjct: 322 NRLLVAGYEYIGMDHFAKPDDSLALAQRAGRLHRNFQGYTTHSDCDLVSLGVSAIGQTDD 381

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +    +     SW   +     A+ +   L+ + +   +++  L  +  +  + +  
Sbjct: 382 AYFQNNHDLP----SWEAAIDSGQLAITKGVNLTRDDRLRRWVIGQLICQFRLDRQQFAA 437

Query: 349 LAGRNLDIECERNLQR------QGFIERVQFSR-LRCTQRGMTMLDSVI 390
               + D      L R         I      R L+    G  ++ ++ 
Sbjct: 438 EWNEDFDQYFADELSRLKPMMADELI--ADNGRVLQVQPAGRLLIRAIC 484


>gi|45655598|ref|YP_003407.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602569|gb|AAS72044.1| O2-independent coproporphyrinogen III oxidase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 443

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 177/409 (43%), Gaps = 29/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQ 60
           ++L    N +  + + SL +Y+H PFC   C +C  N+ + +    ++ +I+S  L    
Sbjct: 29  EWLEKVRNRLRFENT-SLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYIESILLEFSN 87

Query: 61  WMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +++++     R +  +  GGGTP+ +  +N+ ++LD I K   +SS  E ++E +P    
Sbjct: 88  YLKEVPEIAKRELKELHLGGGTPTYLSEKNLEILLDSILKKMNLSSKYEFSLEVDPRRTR 147

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +  R  G  RISLGVQ  + +  R + R            L+R +    ++FDLIY
Sbjct: 148 DTQLKILRDFGFKRISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIY 207

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +   +  +++ L    D ++ Y        L        ++ LPS +   +LY 
Sbjct: 208 GLPKQNLQNMKRTIKKTLELRPDRIAFYSYAHVP-WLKASQRLFTEVDLPSGSAKRELYE 266

Query: 238 LTQSITSAHGLHAYEISNHSF--------LGAESLHNLNYWRY----GDY-IGIGPGAHS 284
           +++ +    G     + + +         +   +LH  N+  Y     D  +G+G  A S
Sbjct: 267 VSREMFLKAGYIEIGMDHFALESDSLFQAVKNGNLHR-NFMGYTAKTTDMLLGLGVSAIS 325

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                 H+     EK  + + K +   G A +    L+ E      L++ L     + V 
Sbjct: 326 DSWDCFHQN----EKIVKKYQKRIYSEGFATLRGHKLNEEDLIQRSLILQLSTSGKVIVP 381

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + E+L    L      +++    + R + + L  T++G   L +V  +L
Sbjct: 382 E-EILREVRL---YLASMEDDTLV-RWEGNLLSLTEKGRPFLRNVCTSL 425


>gi|159184833|ref|NP_354594.2| coproporphyrinogen III oxidase [Agrobacterium tumefaciens str. C58]
 gi|159140117|gb|AAK87379.2| oxygen-independent coproporphyrinogen III oxidase [Agrobacterium
           tumefaciens str. C58]
          Length = 449

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 168/394 (42%), Gaps = 25/394 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIF 75
           N + +Y+H P+C + C +C  ++           ++++   E+  +  L  P ++ S++ 
Sbjct: 45  NRISLYLHIPYCDRLCWFCACHTKHTLKYEPIAVYLEALKQEIAAVGALVSPDAVVSAVH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P++++P ++  ++D + +++T   + EI++E +P+ ++ + +      G++R SL
Sbjct: 105 FGGGSPTMLKPDDMVSLMDCLRRHFTFGLDPEISVEMDPNDLDDSRYDALAAVGMSRASL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +++  + + R  +  +  + +   R      ++ D++Y LP QT    +  + + 
Sbjct: 165 GVQDFDDKVQKTINRIQSFQQTKSVVDAVRARGVHSVNCDILYGLPFQTCETLKKTVGQI 224

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   D ++L+        +        +  LP          +   +    G  A  I 
Sbjct: 225 VSLNPDRVALFGYAHVP-WMKKHQSLIPEHALPDIAERYRQMTMAGEMLKQAGYRAVGID 283

Query: 255 NHSFLG---AESLH----NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +       +++       N+  Y        IG+G  +  R+  G  +  ++      
Sbjct: 284 HFAKPADTLCQAVEAGALRRNFQGYTTDTADALIGLGASSVGRLPQGYVQNMVAT----R 339

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECE 359
            + +MV + G A V+   LS +      ++  L     I + D +   G+   ++  + +
Sbjct: 340 EYQRMVGEGGLAAVKGIELSQDDHLRSHVIERLMCDFSIDLSDMQHRFGKVSHSVRDQAQ 399

Query: 360 RNLQ--RQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           +     R G + R+       T+ G   +  + A
Sbjct: 400 QFAAGDRDG-VVRLDADVFAVTEVGKPFVRHIAA 432


>gi|167034824|ref|YP_001670055.1| coproporphyrinogen III oxidase [Pseudomonas putida GB-1]
 gi|166861312|gb|ABY99719.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida GB-1]
          Length = 460

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 156/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRES--RRAVRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +    GP+  +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LIACHLGPKQRVEQLHFGGGTPTFLSHVELRQLMATLRQHFHLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAVNRLQSLEQTRTLIEAARTLQFRSVNLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +  +  LPS    +++ 
Sbjct: 216 YGLPKQTPEGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDNNDLPSPAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
           + T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 HATIDQLTAAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +     A       + + +    ++  L     +  +
Sbjct: 335 QIGE----LYCQNSSDLNTYQDSLSNAQLATQRGLLCNHDDRIRRAVIQQLICHFELDFE 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +              LQR G I  +    +R    G  +  SV 
Sbjct: 391 PIEQAFTIDFRGYFNDLWPELLTLQRDGLIS-LDSQGIRILPAGRLLARSVC 441


>gi|152990886|ref|YP_001356608.1| coproporphyrinogen III oxidase [Nitratiruptor sp. SB155-2]
 gi|151422747|dbj|BAF70251.1| oxygen-independent coproporphyrinogen III oxidase [Nitratiruptor
           sp. SB155-2]
          Length = 345

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 167/370 (45%), Gaps = 36/370 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC  KC YC FNS    + + +E ++ +FL ++++     G + + +++ GGGT
Sbjct: 3   LYCHIPFCDSKCHYCAFNSFTSNHHLKKE-YMDAFLRQLKFDLDRFGVKKLETVYIGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS I+P+    + D I     +  + EITIEANP+S   +  +G +  G+ RIS GVQS 
Sbjct: 62  PSTIKPKLYEPLFDTITNL--IDEDTEITIEANPNSATKSWLEGVKSLGITRISFGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ LGR H   +AI A+  A       +S DLIY     +    + E+ +A+   +
Sbjct: 120 HEEKLKLLGRAHTPQDAIKAVETAFKAGIEHISIDLIYDTILDSKELLQNEVMQAIKLPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DH+S Y L +E+GT F               +  D  +    +        YE+SN    
Sbjct: 180 DHISAYALILEEGTPFENKM----------EMKKDDEHQGYFLKELIPFEQYEVSNFG-- 227

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
              S HNL YW+   Y+GIG GA        +  +  +  + ++      +       + 
Sbjct: 228 EYRSKHNLGYWQLKSYLGIGCGAVGFAHKKRYYPSSDLLAYIKNPTMYEEEILSESELR- 286

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
                    E + +GLR   G+ ++         LD +    LQ +  +E ++  RL   
Sbjct: 287 --------FEKIFLGLRSIVGVDMQL--------LDAQKVALLQEEKKVE-IREGRLY-- 327

Query: 380 QRGMTMLDSV 389
            +   + D +
Sbjct: 328 NKNFFLADEI 337


>gi|254524933|ref|ZP_05136988.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           sp. SKA14]
 gi|219722524|gb|EED41049.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           sp. SKA14]
          Length = 469

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 88/398 (22%), Positives = 161/398 (40%), Gaps = 30/398 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q + +L +YVH PFC   C YC  N  + R +    +++   L E   +  Q    R 
Sbjct: 55  SNQLARALSLYVHVPFCSSPCFYCGCNRVITRDRGRGHSYVSRVLAEADLLAPQFEDGRE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++ + +  +++G+ + +  S     + +IE +P  ++ ++     + 
Sbjct: 115 VIQLHLGGGTPNFLDAEAMTTLVEGLRRRFDFSDSPQRDFSIELDPRFIDTHDVAMLARL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQW 187
           G NR SLGVQ  +      + R     + +  +   R+   R ++ DLIY LP Q++  +
Sbjct: 175 GFNRASLGVQDFDPHVQESINRIQGVQQTLDILQACRDSGMRSVNVDLIYGLPGQSLEGF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+R L+   D L++Y        LF    +  +  LPS    + L  L+    SA G
Sbjct: 235 GRTLERVLALRPDRLAVYGYAHLPH-LFRAQKQIDERRLPSPEDKLALLGLSVEKLSAAG 293

Query: 248 LHAYEISNHSFL--------GAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
                + + +           A  LH  N+  Y      D +G+G  A S +     +  
Sbjct: 294 YQYIGMDHFALPEEDLSRAQRAGQLHR-NFMGYTTHADTDLLGLGVSAISHIGATYSQN- 351

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               +   SW   V +    V     LS++ Q    L+  L  +  +         G + 
Sbjct: 352 ---PRDLPSWEDAVDQGQLPVWRGVALSADDQLRAELIQQLMCQGEVDGAVLGQRHGVDF 408

Query: 355 DIECERN------LQRQGFIERVQFSRLRCTQRGMTML 386
           +     +      LQ  G  E  +   +R ++ G  +L
Sbjct: 409 ERYFAEDLRSVQRLQEDGLAEYRE-GVVRASEPGRPLL 445


>gi|257455132|ref|ZP_05620370.1| oxygen-independent coproporphyrinogen III oxidase [Enhydrobacter
           aerosaccus SK60]
 gi|257447465|gb|EEV22470.1| oxygen-independent coproporphyrinogen III oxidase [Enhydrobacter
           aerosaccus SK60]
          Length = 492

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 73/393 (18%), Positives = 144/393 (36%), Gaps = 26/393 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFF 76
            + +Y H PFC   C YC  N  + +      +++     E++  R L      +  + F
Sbjct: 85  PVSLYFHIPFCRHLCYYCGCNKIITKKNSDSGDYLAYLFAEIRHKRSLMQGDPIVEQVHF 144

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGGTP+ +    +  + + +   +T S     + +IE +P  +     +  R  G NR+S
Sbjct: 145 GGGTPTFLTDDELVKLWNFLQTQFTFSDKPTADYSIEIDPRELRPTTLEILRGLGFNRVS 204

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQ L+E+    + R  +       +  AR   F  ++ DLIY LP QT+      ++R
Sbjct: 205 FGVQDLQEKVQIAVNRVQSEEMIQGVMTEARRLGFHSINIDLIYGLPHQTVDSMRNTVER 264

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +  + D LS++         F    +  +  LPS    + +   T    +  G     I
Sbjct: 265 IIDISPDRLSVFNYAHLPE-RFKGQRQINEADLPSPADKLTMLGNTIHALTDAGYQYIGI 323

Query: 254 SNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           E   + N+  Y      D +G G  + S++ +   +         
Sbjct: 324 DHFAKPDDELAIAQREGKLHRNFQGYTTHGNCDLLGFGVSSISQIGLHILQNPT----DL 379

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +  ++       V+            +++M L   + I  KD       +        
Sbjct: 380 NDYQNLINAGKLPAVKVISARLPDLLRRYVIMNLLCHDYIDFKDVNARFSIDPMTYFIDE 439

Query: 362 LQRQG-----FIERVQFSRLRCTQRGMTMLDSV 389
           +++ G      +  +    +R   +G  +  +V
Sbjct: 440 IRQLGEMQADKLVDMDAKGIRVLPKGRLLGRNV 472


>gi|291276378|ref|YP_003516150.1| putative oxygen-independent coproporhyrinogen III oxidase HemN
           [Helicobacter mustelae 12198]
 gi|290963572|emb|CBG39404.1| putative oxygen-independent coproporhyrinogen III oxidase; HemN
           [Helicobacter mustelae 12198]
          Length = 353

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 157/328 (47%), Gaps = 23/328 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  +C YC FNS   +       +I +  T++      +  + + SIFFGGGT
Sbjct: 3   LYIHIPFCTSRCGYCTFNSFENK-HALIPAYINALCTDL---ASHSTSQRLDSIFFGGGT 58

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++P+    I   + ++++++   EIT+E+NP  V     +     G NR+S GVQS 
Sbjct: 59  PNTLDPRAFEKIFATLHRHFSLAPKCEITLESNPDLVTKQWCKDLHTLGANRLSFGVQSF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L FL R H+  +   A+  A    F  +S DLIY  P     + + E   A +  +
Sbjct: 119 FADKLAFLQREHSQRDIHHALECATRAGFQNLSIDLIYDTPLDNEKRIKEETSLASALPI 178

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +HLS Y LTIEK +   K           +     L++  +   + H    YE SN++  
Sbjct: 179 NHLSAYSLTIEKQSRLQKQGV--------QEAKESLFDCIRQNLAKHNFTQYETSNYAR- 229

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G +  HNL YWR  DYIG G GA  +       V     ++ E+++           +KE
Sbjct: 230 GYKVAHNLAYWRNEDYIGCGCGAVGK----RGDVRSYTHQNLEAYIAD-----PTYRKKE 280

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWE 347
            LS E +  E L +GLR   G+S++ ++
Sbjct: 281 RLSKEDKVLETLFLGLRSEVGVSLEVFQ 308


>gi|153802614|ref|ZP_01957200.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-3]
 gi|124121877|gb|EAY40620.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae MZO-3]
          Length = 263

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 127/264 (48%), Gaps = 10/264 (3%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           +QS E + L  LGR H   EA+ A  LA  I     + DL++ LP QT  Q   +L +A+
Sbjct: 1   MQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQAI 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +    HLS YQLTIE  TLFY         LP E+   D++ L     S  G   YEIS 
Sbjct: 61  ALNPPHLSWYQLTIEPNTLFYSKPPK----LPDEDALWDIFELGHQKLSDAGYVQYEISG 116

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHA 314
           +S  G +  HNLNYWR+GDY+GIG GAH ++     R+  + + KHP  +L  +     A
Sbjct: 117 YSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKA 176

Query: 315 VVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIERV 371
            ++ E L + + +  EF M   RL E     D+    G  +D+          +G++   
Sbjct: 177 YLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEGYLSE- 235

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
                + T++G   L+ ++     
Sbjct: 236 DDQHWQITEKGKLFLNDLLEAFMA 259


>gi|23012875|ref|ZP_00052862.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Magnetospirillum magnetotacticum MS-1]
          Length = 451

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/396 (16%), Positives = 146/396 (36%), Gaps = 27/396 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           L +Y+H  FC + C +C  ++ + +       ++ +   E++ + +    R +   I FG
Sbjct: 47  LSLYLHIAFCAEMCWFCGCHTKITKRYAPVAAYMDALWREVELVAEALPTRMTARHIHFG 106

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+++  ++    +D +   + + +  E+ +E +P + + +  +    AGV R S+GV
Sbjct: 107 GGSPTILSSEDFVRTIDLLKSRFILKAGAEVAVELDPRTADESYVKAMAGAGVTRASIGV 166

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q L+++  + + R          +        P ++ DLIY LP Q++      + +A+ 
Sbjct: 167 QDLDDKVQQAINRIQPYEVTERVVEWLGKHGVPEVNIDLIYGLPHQSLDGLLATIDKAVR 226

Query: 197 -YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT-SAHGLHAYEIS 254
            +    ++L+        +        +  LP  N     Y     +     G     + 
Sbjct: 227 GFRPKRVALFGYAHVP-WMKKHQRLIPEETLPDTNTRWQQYEQGCKLLTETLGYVQIGLD 285

Query: 255 NHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +               + N+  Y        IG G      +  G       +     
Sbjct: 286 HFAAPDDAMAIALRNKRLHRNFQGYTTDSATTLIGFGASGIGSLPQGYVVNDGEVH---- 341

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-----LDIE 357
           ++ + V +   A      +S +      ++  L     I +       G +      ++ 
Sbjct: 342 AYQRSVAEGRLATSRGIAISPDDILRREIIERLMCDLEIDLDAVAGRHGADGSQFGAELA 401

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               LQ  G +E     R+  T+ G T++ +V A  
Sbjct: 402 SLAPLQADGLVEVT-GHRIHVTEEGRTLVRAVCAAF 436


>gi|24217078|ref|NP_714561.1| coproporphyrinogen III oxidase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 479

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 177/409 (43%), Gaps = 29/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQ 60
           ++L    N +  + + SL +Y+H PFC   C +C  N+ + +    ++ +I+S  L    
Sbjct: 65  EWLEKVRNRLRFENT-SLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYIESILLEFSN 123

Query: 61  WMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +++++     R +  +  GGGTP+ +  +N+ ++LD I K   +SS  E ++E +P    
Sbjct: 124 YLKEVPEIAKRELKELHLGGGTPTYLSEKNLEILLDSILKKMNLSSKYEFSLEVDPRRTR 183

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +  R  G  RISLGVQ  + +  R + R            L+R +    ++FDLIY
Sbjct: 184 DTQLKILRDFGFKRISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIY 243

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +   +  +++ L    D ++ Y        L        ++ LPS +   +LY 
Sbjct: 244 GLPKQNLQNMKRTIKKTLELRPDRIAFYSYAHVP-WLKASQRLFTEVDLPSGSAKRELYE 302

Query: 238 LTQSITSAHGLHAYEISNHSF--------LGAESLHNLNYWRY----GDY-IGIGPGAHS 284
           +++ +    G     + + +         +   +LH  N+  Y     D  +G+G  A S
Sbjct: 303 VSREMFLKAGYIEIGMDHFALESDSLFQAVKNGNLHR-NFMGYTAKTTDMLLGLGVSAIS 361

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                 H+     EK  + + K +   G A +    L+ E      L++ L     + V 
Sbjct: 362 DSWDCFHQN----EKIVKKYQKRIYSEGFATLRGHKLNEEDLIQRSLILQLSTSGKVIVP 417

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + E+L    L      +++    + R + + L  T++G   L +V  +L
Sbjct: 418 E-EILREVRL---YLASMEDDTLV-RWEGNLLSLTEKGRPFLRNVCTSL 461


>gi|295838480|ref|ZP_06825413.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB74]
 gi|295827013|gb|EFG65183.1| coproporphyrinogen III oxidase [Streptomyces sp. SPB74]
          Length = 438

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 84/394 (21%), Positives = 156/394 (39%), Gaps = 13/394 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PR 69
            +  N+L +Y+H PFC  +C +C+  + V   +     ++ +   + + +R   G   P 
Sbjct: 32  AEPKNALSLYLHIPFCEVRCGFCNLFTRVGAPEGLTTAYLDALERQARAVRAALGGAEPV 91

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKA 128
             ++  FGGGTP+ +    +  + D            + +++E +P++   +        
Sbjct: 92  RYATAAFGGGTPTFLTAAELERLCDIAEHRMGARLGAIPLSVETSPATATPDRLAVLAAR 151

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G  R+S+GVQS +E   R   R    ++  AA+  AR   FP ++ DLIY +  QT   W
Sbjct: 152 GTTRLSIGVQSFDEAEARAAVRPQRRADVEAALGHARAAGFPVLNIDLIYGIDGQTEASW 211

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L  AL++  + L LY L +   T   +   +G      +   + LY   +    AHG
Sbjct: 212 LRSLDAALAWRPEELYLYPLYVRPLTGLGRRASEGPDPE-WDERRLRLYRAGRDHLLAHG 270

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKHPESWL- 305
                + +     A +    +Y    D   G+G GA S  +   +    ++  H    L 
Sbjct: 271 YTQGSMRSFRRADAPAEGPEDYACQTDGMTGLGCGARSYTRELHYSFDYAVGAHEVRALV 330

Query: 306 -KMVRKNGHAVVE-KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL- 362
              V        E    +  +++    L+  L    G+   ++    G +   +    L 
Sbjct: 331 DAYVGTADFTRAEYGRVIDGDERRRRHLLQSLLQAAGLDRAEYRARFGSDPAEDFPAELT 390

Query: 363 --QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               +G+++      LR T  G+   D+V   L 
Sbjct: 391 GFAAEGWLDERTPGVLRLTPEGLAHSDAVGPRLF 424


>gi|148558257|ref|YP_001258045.1| coproporphyrinogen III oxidase [Brucella ovis ATCC 25840]
 gi|148369542|gb|ABQ62414.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ovis
           ATCC 25840]
          Length = 450

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/406 (17%), Positives = 149/406 (36%), Gaps = 27/406 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           + N++ G       +Y+H PFC   C YC  ++ +        +++     E++ + +  
Sbjct: 38  WLNSIPGDQDT--SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQR 95

Query: 67  GPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           G   ++  I FGGGTP+ I+P     ++  +      +  +   +E +P  +        
Sbjct: 96  GRSFNLGEIHFGGGTPTNIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAAL 155

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
             +G+ R SLGVQS + +  + + R   A   +  +  L +N    ++FDLIY LP QT+
Sbjct: 156 AYSGITRASLGVQSFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTV 215

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                 +  A+    +  +++      G          +  LP                 
Sbjct: 216 ASCIETVDIAVEMRPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLV 274

Query: 245 AHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHR 292
             G     + + +           E   + N+  Y        IGIG  A  R   G H+
Sbjct: 275 EAGYEQIGLDHFALPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQ 334

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
             +     P  +   V        +   L++E +    ++  L     ++V       G 
Sbjct: 335 NIVP----PGLYASCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGF 390

Query: 353 NLDI-----ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + ++     +    L++ G ++R +   +R   R   ++ +V +  
Sbjct: 391 DPEVLMKQNDTLDELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|306845355|ref|ZP_07477930.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
 gi|306274271|gb|EFM56083.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO1]
          Length = 450

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 144/393 (36%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++      G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAGRLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     + V       G + ++     +   
Sbjct: 344 SRVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVDVAAVCAAHGFDPEMLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|27904972|ref|NP_778098.1| putative oxidase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38372571|sp|Q89A47|Y498_BUCBP RecName: Full=Uncharacterized protein bbp_498
 gi|27904370|gb|AAO27203.1| putative oxidase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 374

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 102/381 (26%), Positives = 191/381 (50%), Gaps = 16/381 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           LG+Y++ P+  K+  Y DF     + K+ ++ +I   L +++    L   R+I++IF GG
Sbjct: 4   LGLYINIPWPTKRYKYHDFKFPEYKKKINEKKYIHHLLQDLKKDSLLVPNRTINTIFIGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
             P+  +  +I  +L  I     +S N E TIE + S +       Y+K G+NR S+ +Q
Sbjct: 64  IAPNFFKLTSIKYLLKKIKNIIPISKNAENTIEFHISKLSEKKIFYYKKFGINRFSIRIQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +++    L + H +   +  I       F  ++ DLIY LPKQ++ +  ++L+ A+S 
Sbjct: 124 TFDQKKFNSLSKVHISKNILHKIKKINIEKFKNINLDLIYGLPKQSLQEALLDLKTAISL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S  +  IEK    YK          + N+   ++   + +    G   YEIS++S
Sbjct: 184 KPNHISWCEFYIEKNNNNYKNLSKSC----NLNIIWKIFLQGEKLLKKSGYKKYEISSYS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVV 316
               + LHNLNYW++GDY+GIG  AH ++   + ++  +I+ K+ + ++     NG    
Sbjct: 240 KTNYQCLHNLNYWKFGDYLGIGCNAHGKITQKNGKIIKTIKNKNLKKFM-----NGKYTY 294

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQF 373
           +   +S +  + EF M  LRL   I  KD++     +   +  E ++ +++   IE  ++
Sbjct: 295 KNHIISKKNLSLEFFMNRLRLNTPIYRKDFKKYTYISEFYIKNEIKQAIEQNYLIETKKY 354

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
              + T +G+  LDS++    
Sbjct: 355 --WKMTSKGIQFLDSLLEIFI 373


>gi|257456964|ref|ZP_05622145.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema vincentii ATCC 35580]
 gi|257445673|gb|EEV20735.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Treponema vincentii ATCC 35580]
          Length = 393

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 111/396 (28%), Positives = 182/396 (45%), Gaps = 35/396 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRR---------YKVGQENFIQSFLTEMQWMRQLTG 67
              G+Y+H PFC +KC YCDF S  +                +FI+  L ++++ ++   
Sbjct: 2   KPSGLYIHIPFCTQKCRYCDFYSLTQHSIAQQTGFHPYHPNPHFIERLLQDIRFFKERYA 61

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             +  +I+ GGGTPSL+ P +I  +  GI +   +    E TIEANP  +         +
Sbjct: 62  IEAWRTIYIGGGTPSLLHPGDIRSLAAGIREGQML-PVEEFTIEANPEDIHEEWLAACSE 120

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
            G+NR+S+GVQS +   L   GR  +  + I A+   ++ +  ++S DLI  L  QT   
Sbjct: 121 GGINRLSIGVQSFDNTVLAANGRRGSKEKTIQALETIKSRWHGKLSCDLIAGLTGQTAQS 180

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +++R + Y ++HLSLY L   +            L    E+   +L     ++ +A+
Sbjct: 181 LSDDVRRLIDYRIEHLSLYGLCSSEP-----------LPETREDFISELLQQNTALLAAN 229

Query: 247 GLHAYEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSHRVAISIE--K 299
           G   YE+SN S      S+HN  YW+   Y GIGP A   +      G    A   E  K
Sbjct: 230 GYVRYEVSNFSYRDKHRSVHNQIYWKMEPYAGIGPAACGTLVHEDTSGGFTAAERFEGIK 289

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               W+     +  +V   E +S +   +E L+MG RL EGI+ KD+    G ++     
Sbjct: 290 DIGRWMTAP--DRTSVYTYERISRKTFLEEVLLMGFRLSEGINRKDFSRRFGADITAYIG 347

Query: 360 RNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
             L   ++ G   R++  R   T+ G+  L+  + +
Sbjct: 348 NTLSRWEKSGQC-RIEPERTYLTEEGLLFLNRFLVD 382


>gi|158426276|ref|YP_001527568.1| oxygen-independent coproporphyrinogen III oxidase [Azorhizobium
           caulinodans ORS 571]
 gi|158333165|dbj|BAF90650.1| oxygen-independent coproporphyrinogen III oxidase [Azorhizobium
           caulinodans ORS 571]
          Length = 467

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC + C YC   + V R       + +    E+  + +    R +++ + +GG
Sbjct: 61  SIYLHVPFCAELCLYCGCTTSVARRYTPVAAYAERLRGEIARVAERIPGRLAVTHLHWGG 120

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L+   ++  +++ + +++ V  + E+ IE +P  +  +  +    +G+ R SLGVQ
Sbjct: 121 GTPTLLAGGDMIALMESVRRHFDVKPHAELAIEVDPRVLSTDMVEALAASGITRASLGVQ 180

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
             +      +GR  +  E   A    R      ++ DLIY LP QT+      ++ ALS 
Sbjct: 181 DFDPAVQAAIGRMQSFEETARAADALRRAGIGSLNLDLIYGLPHQTLESVLRTVRTALSL 240

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D ++++        +        D  LP  +  +        + +A G  A  + + +
Sbjct: 241 DPDRIAVFGYAHVP-WMKKHQALIPDQSLPGPDARLAQAEAIADLLTAEGYVAIGLDHFA 299

Query: 258 FL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                     A+     N+  Y        +G G  A   +  G  +           W 
Sbjct: 300 KPTDAMARQAADGTLKRNFQGYTTDDAPVLLGFGASAIGMLPQGYVQNIAQTP----GWH 355

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----IECER 360
             + + G  +     L+ E +    ++  L     + +       G  +D     +    
Sbjct: 356 AALEEGGLPIARGIALTPEDRLRRDVIERLMCDSAVDLAAVLRAHGFAVDFFAPELARLA 415

Query: 361 NLQRQGFIERVQFSRL 376
           + +  G +ER   +RL
Sbjct: 416 DFEADGLMERT-GTRL 430


>gi|78776805|ref|YP_393120.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM
           1251]
 gi|78497345|gb|ABB43885.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Sulfurimonas denitrificans DSM 1251]
          Length = 455

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/410 (18%), Positives = 157/410 (38%), Gaps = 32/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   ++      S  L +Y H PFC   C +C  N      +     +++    E++ 
Sbjct: 34  EYIQKLKSQ---DSSRPLSLYFHLPFCKNACYFCGCNVVFTSKEDKMLRYLEYLKRELKI 90

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEV 119
           +       RS+  + FGGGTP+    + +  ++  I   +       EI+ E +P  ++ 
Sbjct: 91  LSSFVDCNRSVIQMHFGGGTPTFFSAEQLDEVIKEIRHFFPNFVKEAEISCEIDPRHIDE 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +  +   + G NR+S G+Q   E+    + R         A+ LAR      ++ DLIY 
Sbjct: 151 DQMRVLSQNGFNRVSFGIQDFNEKVQIAVHRVQPYEITKYAMDLARKYNMHSVNVDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+  ++  L R+L+   D  +++        +   M K  +  LP  +  + +   
Sbjct: 211 LPFQTLETFKETLARSLTLNADRYAVFNYAHVP-WMKKTMRKIDETTLPLPDEKLQIMQY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T    +++G     + + +    E         LH  N+  Y      D IG+G    + 
Sbjct: 270 TIDFLTSNGYRMIGMDHFAKPEDELFKAIEKGELHR-NFQGYTTKGGADLIGVGL---TS 325

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +  G    A +  K  + +   + +          L+ +    ++++M L     + +K 
Sbjct: 326 IGEGVSHYAQNF-KEMKEYEAAIEEGKLPFERGVALNEDDMIRQYVIMELMSNFKLDIKR 384

Query: 346 WEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           +E L   +            +       +       + C+Q G  ++ ++
Sbjct: 385 FEKLFNIDFKTYFTDAINELKPFVDDELLTMNDN-FIECSQTGTLLIRNI 433


>gi|194365207|ref|YP_002027817.1| coproporphyrinogen III oxidase [Stenotrophomonas maltophilia
           R551-3]
 gi|194348011|gb|ACF51134.1| oxygen-independent coproporphyrinogen III oxidase [Stenotrophomonas
           maltophilia R551-3]
          Length = 469

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 88/398 (22%), Positives = 158/398 (39%), Gaps = 30/398 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + Q + +L +YVH PFC   C YC  N  + R +    +++   L E   +  Q    R 
Sbjct: 55  SNQLARALSLYVHVPFCSSPCFYCGCNRVISRDRGRGHSYVSRVLAEADLLAPQFEDGRE 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKA 128
           +  +  GGGTP+ ++ + +  +++G+ + +  S     + +IE +P  ++  +     + 
Sbjct: 115 VIQLHLGGGTPNFLDAEAMTTLIEGLRRRFDFSDSSQRDFSIELDPRFIDTPDVAMLARL 174

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQW 187
           G NR SLGVQ  + Q    + R     + +  +   R+   R ++ DLIY LP Q++  +
Sbjct: 175 GFNRASLGVQDFDPQVQESINRVQGVQQTLDILRACRDSGMRSVNVDLIYGLPGQSLEGF 234

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  L+   D L++Y        LF    +  +  LPS    + L  L     SA G
Sbjct: 235 GRTLELVLALRPDRLAVYGYAHLPH-LFRAQKQIDESRLPSPEDKLALLGLAVERLSAAG 293

Query: 248 LHAYEISNHSFL--------GAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
                + + +           A  LH  N+  Y      D +G+G  A S +     +  
Sbjct: 294 YQYIGMDHFALPEEDLSRAQRAGQLHR-NFMGYTTHADTDLLGLGVSAISHIGATYSQN- 351

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
               +   SW   V      V     LS++ Q    L+  L  +  +         G + 
Sbjct: 352 ---PRDLPSWEDAVDHGQLPVWRGVALSADDQLRAELIQQLMCQGEVDGAVLGQRHGVDF 408

Query: 355 DIECERN------LQRQGFIERVQFSRLRCTQRGMTML 386
           +     +      LQ  G  E  +   +R ++ G  +L
Sbjct: 409 EQYFAEDLRSVQRLQDDGLAEYRE-GVVRASEPGRPLL 445


>gi|166154088|ref|YP_001654206.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 434/Bu]
 gi|166154963|ref|YP_001653218.1| coproporphyrinogen III oxidase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335293|ref|ZP_07223537.1| coproporphyrinogen III oxidase [Chlamydia trachomatis L2tet1]
 gi|165930076|emb|CAP03559.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis 434/Bu]
 gi|165930951|emb|CAP06513.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 457

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 90/403 (22%), Positives = 168/403 (41%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
            Q  + L +Y H PFC   C YC     + R     +++I++ + EM+    L G  + +
Sbjct: 43  AQEQDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +        G
Sbjct: 103 SRIHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A  L R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++  L    D L+L+          ++        LPS      +Y+ ++      G 
Sbjct: 223 QTIEHILDMRPDRLALFSFAHVPWAKPHQKALRTK-DLPSMEEKFAIYSQSRHTLIQEGY 281

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +L N     N+  Y      D +G G  A S +      + + 
Sbjct: 282 QAIGLDHFSLPDDPLTIALKNKTLIRNFQGYSLPPEEDLLGFGISATSFI----RGIYLQ 337

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    + + ++ +  A V+ + LS + +  ++++  L     +S  ++E       D 
Sbjct: 338 NVKDLREYSETIQASKLATVKGKILSQDDKIRKWVIHTLMCSFSLSKLEFEQRFHERFDR 397

Query: 357 ECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +      ++  G I R   S L+ T  G   +  +    
Sbjct: 398 YFADSYDRLCGMESAGLI-RQDSSSLQVTPLGELFVRVIATAF 439


>gi|89897944|ref|YP_515054.1| coproporphyrinogen III oxidase [Chlamydophila felis Fe/C-56]
 gi|89331316|dbj|BAE80909.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           felis Fe/C-56]
          Length = 458

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 164/402 (40%), Gaps = 28/402 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
                L +Y+H PFC   C YC  +  + R +   EN+I + + EM+ +  L G  R  S
Sbjct: 45  ADDRPLSLYIHIPFCQTMCLYCGCSVVINRREDIVENYISTLIKEMELVNTLLGGKRKTS 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
            I FGGGTPS +  +    +   I + + +S   EI IE +P S+  +    +  +  G 
Sbjct: 105 RIHFGGGTPSRLSRKLFEKLFSHIHRCFDLSEVEEIAIEFDPRSLRNDSEKAEFIQSLGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  +      + R  +  E++ A    R   F  ++ DLIY LPKQT   +  
Sbjct: 165 NRVSLGVQDTQASVQEAVRRRQSYEESLHAYEKFRELGFESINIDLIYGLPKQTKKTFSQ 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +   L    D L+L+        +        D  LPS      +Y+  + + +  G  
Sbjct: 225 TIVDILQMRPDRLALFSFASVP-WIKPHQKAMKDSDLPSMEEKFAIYSHARHMLTKSGYQ 283

Query: 250 AYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
           A  + + S        +  N     N+  Y      D IG+G  + S +      + +  
Sbjct: 284 AIGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMTSTSFI----RGIYLQN 339

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  ES+   +     A ++ + LS + +  ++++  L     +S +++  L G + D  
Sbjct: 340 AKTLESYHTKILSGSLATIKSKVLSEDDRIRKWVIHKLMCTFVVSKEEFSHLFGYHFDEY 399

Query: 358 CERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
              + +R       G I +   S L  T  G   +  +    
Sbjct: 400 FSDSQERLAGMATTGLI-QNSSSFLTITPLGELFVRVIATAF 440


>gi|260566764|ref|ZP_05837234.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
 gi|260156282|gb|EEW91362.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
          Length = 444

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 152/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISSLMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|23501542|ref|NP_697669.1| coproporphyrinogen III oxidase [Brucella suis 1330]
 gi|163842927|ref|YP_001627331.1| coproporphyrinogen III oxidase [Brucella suis ATCC 23445]
 gi|254703989|ref|ZP_05165817.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|256369093|ref|YP_003106601.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|261754642|ref|ZP_05998351.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 3 str. 686]
 gi|294852019|ref|ZP_06792692.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
 gi|23347452|gb|AAN29584.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           1330]
 gi|163673650|gb|ABY37761.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           ATCC 23445]
 gi|255999253|gb|ACU47652.1| coproporphyrinogen III oxidase [Brucella microti CCM 4915]
 gi|261744395|gb|EEY32321.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 3 str. 686]
 gi|294820608|gb|EFG37607.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           NVSL 07-0026]
          Length = 444

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 152/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|225852176|ref|YP_002732409.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256264313|ref|ZP_05466845.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225640541|gb|ACO00455.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|263094586|gb|EEZ18384.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326408677|gb|ADZ65742.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
 gi|326538402|gb|ADZ86617.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis M5-90]
          Length = 444

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 152/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVTDSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDADRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|62289615|ref|YP_221408.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|82699543|ref|YP_414117.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|189023869|ref|YP_001934637.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|237815110|ref|ZP_04594108.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|254688931|ref|ZP_05152185.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254697065|ref|ZP_05158893.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254729962|ref|ZP_05188540.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|256257179|ref|ZP_05462715.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260545629|ref|ZP_05821370.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260754418|ref|ZP_05866766.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 6 str. 870]
 gi|260757637|ref|ZP_05869985.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 4 str. 292]
 gi|260761464|ref|ZP_05873807.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260883446|ref|ZP_05895060.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 9 str. C68]
 gi|297248027|ref|ZP_06931745.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|62195747|gb|AAX74047.1| HemN-1, oxygen-independent coproporphyrinogen III oxidase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82615644|emb|CAJ10631.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator
           protein 3/MiaB/NifB:Radical SAM [Brucella melitensis
           biovar Abortus 2308]
 gi|189019441|gb|ACD72163.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus S19]
 gi|237789947|gb|EEP64157.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|260097036|gb|EEW80911.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260667955|gb|EEX54895.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 4 str. 292]
 gi|260671896|gb|EEX58717.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260674526|gb|EEX61347.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 6 str. 870]
 gi|260872974|gb|EEX80043.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 9 str. C68]
 gi|297175196|gb|EFH34543.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 444

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 152/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVTDSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|115525932|ref|YP_782843.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisA53]
 gi|115519879|gb|ABJ07863.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisA53]
          Length = 450

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/398 (19%), Positives = 142/398 (35%), Gaps = 26/398 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
                + +Y+H PFC + C YC  N  +         + Q  L E+  +      R  ++
Sbjct: 42  DQDEPISLYLHVPFCKQMCWYCGCNMKLASRYEPVATYFQHLLDEVDLIADAMPGRMPVA 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTP++++P+++A ++  IA  + +  N E+ IE++P ++           G  R
Sbjct: 102 HLHFGGGTPTVLDPEDLATLMALIADRFRLVENAELAIESDPRTLTDAMVDKIGAIGFTR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMEL 191
            S GVQ  + +    + R         A+   R+     ++FDLIY LP QT       +
Sbjct: 162 ASFGVQEFDPKVQEAINRIQPPEMVENAMDRFRSAGVNKLNFDLIYGLPYQTAADLRRTV 221

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++ +    D ++L+           +     +  LP+     +  N         G    
Sbjct: 222 EQCVEMKPDRVALFGYAHVPWVASNQKMIPTEA-LPNPAQRAEQANAAAEALVKGGYVRI 280

Query: 252 EISNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIE 298
            I + +  G      A++  LH  N+  Y        IG+G  +  R   G  +      
Sbjct: 281 GIDHFALPGDTLAVAAQTGELHR-NFQGYTPDASPTLIGLGSTSIGRTPSGYVQNISE-- 337

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
               ++++ V      +        E +    ++  +     + +       G   D   
Sbjct: 338 --SGAYMRAVAAGKLPIARGHAFKGEDELRAHVIERIMCDGKVDLPKAGKTFGVADDWYA 395

Query: 359 -----ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                   LQ  G +       L  T  G  +   V A
Sbjct: 396 NECEPIAQLQSDGVVTWDDKGVLTLTAAGQPLARVVAA 433


>gi|313675750|ref|YP_004053746.1| oxygen-independent coproporphyrinogen iii oxidase [Marivirga
           tractuosa DSM 4126]
 gi|312942448|gb|ADR21638.1| oxygen-independent coproporphyrinogen III oxidase [Marivirga
           tractuosa DSM 4126]
          Length = 450

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/411 (19%), Positives = 158/411 (38%), Gaps = 33/411 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ- 60
            +L+  ++    Q   S+ +Y+H PFC   C YC  N  + +    +E +I + L E   
Sbjct: 33  DWLNEVKSIYFSQVDKSISLYMHLPFCESLCTYCGCNKRITKNHGVEERYIDALLAEWDI 92

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +++ L     I +I  GGGTP+    +N+  +L  I +   +      + E +P++    
Sbjct: 93  YVKALEEKPVIRNIHLGGGTPTFFSSENLHKLLFTILETSEIHPQKAFSFEGHPNNTTYE 152

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
             +     G +R+S GVQ    Q  + + R             AR +    +++DLIY L
Sbjct: 153 QLKVLADLGFDRVSFGVQDFNLQVQKAIHRIQPIENVRKTTAWARELGYTSVNYDLIYGL 212

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+   E  +++   +  + ++LY                GD  LP  +  + +Y   
Sbjct: 213 PFQTLVNIEENIEKLREFKPERIALYSYAHVP-WKSKAQRGYGDEDLPKPDEKLAMYLRA 271

Query: 240 QSITSAHGLHAYEISNHSFL------GAESLH-NLNYWRYGD-----YIGIGPGAHSRVK 287
           + + +  G     + +++          E  + N N+  Y        IG+G  A S   
Sbjct: 272 KQLLNEMGYENIGMDHYALPQDELTIAKEKGYLNRNFMGYTTDQNQMMIGLGCSAISATG 331

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +    +EK    +   V      +    FL+ E++    L+  L         D+ 
Sbjct: 332 TAFVQNEKVVEK----YQTAVLDEKLPLTTGHFLTEEEETSAQLINQLICNG---KADFS 384

Query: 348 MLAGRNLDIEC-------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                +L +E           +Q  G +E   +   + T+ GM  + ++ +
Sbjct: 385 T---NSLSMELWEGAKSELDEMQDDGLVEIDDY-FAKVTEEGMLFVRNICS 431


>gi|198282445|ref|YP_002218766.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665989|ref|YP_002424644.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198246966|gb|ACH82559.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518202|gb|ACK78788.1| oxygen-independent coproporphyrinogen III oxidase
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 463

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 85/407 (20%), Positives = 148/407 (36%), Gaps = 30/407 (7%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGP 68
           + +      L +Y H PFC   C YC     V R+      ++     EM      + G 
Sbjct: 49  DRSNTSGRPLSLYFHIPFCEHLCFYCACTKVVTRHHEWGTPYVAHLDQEMALTRAHIDGN 108

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYR 126
           R +  + FGGGTP+ +   ++ ++LD I K++ +      E  IE +P ++E    +  R
Sbjct: 109 RPVDQLHFGGGTPTFLRRHDMTVLLDSIRKHFLLLPDDRGEYGIEIDPRALEPGTLRLLR 168

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
             G NRIS+GVQ L+    + + R  + +     I  AR   F  +S DLIY LP QT  
Sbjct: 169 DFGFNRISIGVQDLDTAVQKAVHREQSFALTAGVIGEARQLGFRSVSLDLIYGLPLQTPE 228

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L+  L+   D LS++         F    +  D  +PS +  + +   + +    
Sbjct: 229 SFARTLEAVLAMRPDRLSVFNYAHLPE-RFPPQKRIPDADIPSPDTKLRILAESIATLQE 287

Query: 246 HGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHR 292
            G     + + +    E        SL+  N+  Y      D +  G  A + V     +
Sbjct: 288 AGYLYIGMDHFALPDDELAIAQREGSLYR-NFQGYSTHAGTDLLAFGMSAIAMVGPTYSQ 346

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                 K  ++W   +      V     L  E      ++  L     +         G 
Sbjct: 347 NI----KDLDTWGTTLESGHLPVERGLHLGDEDLLRRHIITRLICDFSLDFAALNRQFGL 402

Query: 353 NLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +       +L         G +     + L  T +G  ++  +    
Sbjct: 403 DFHQHFAASLPALEAMASDGLLHMDAHT-LTVTPQGRLLIRHICMAF 448


>gi|15605479|ref|NP_220265.1| coproporphyrinogen III oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789487|ref|YP_328573.1| coproporphyrinogen III oxidase [Chlamydia trachomatis A/HAR-13]
 gi|237803176|ref|YP_002888370.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805097|ref|YP_002889251.1| coproporphyrinogen III oxidase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311578|ref|ZP_05354148.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276]
 gi|255317879|ref|ZP_05359125.1| coproporphyrinogen III oxidase [Chlamydia trachomatis 6276s]
 gi|3329206|gb|AAC68341.1| Coproporphyrinogen III Oxidase [Chlamydia trachomatis D/UW-3/CX]
 gi|76168017|gb|AAX51025.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis A/HAR-13]
 gi|231273397|emb|CAX10312.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274410|emb|CAX11205.1| coproporphyrinogen oxidase (NAD) [Chlamydia trachomatis
           B/Jali20/OT]
 gi|296436293|gb|ADH18467.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9768]
 gi|296437222|gb|ADH19392.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11222]
 gi|296438152|gb|ADH20313.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/11074]
 gi|297140653|gb|ADH97411.1| coproporphyrinogen III oxidase [Chlamydia trachomatis G/9301]
 gi|297748876|gb|ADI51422.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-EC]
 gi|297749756|gb|ADI52434.1| Oxygen-independent coproporphyrinogen-III oxidase [Chlamydia
           trachomatis D-LC]
          Length = 457

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 90/403 (22%), Positives = 167/403 (41%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
            Q  + L +Y H PFC   C YC     + R     +++I++ + EM+    L G  + +
Sbjct: 43  AQEQDPLSLYFHIPFCQSMCLYCGCTVVLNRKAEIVDHYIETLIQEMRLAFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +        G
Sbjct: 103 SRIHFGGGTPSRLSRAQFERLFTHIHRFFDLSNIEELAIEFDPRSLREDADKPLFLHNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A  L R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYQLFRDLKFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++  L    D L+L+          ++        LPS      +Y+ ++      G 
Sbjct: 223 QTIEHILDMRPDRLALFSFAHVPWAKPHQKALRTK-DLPSMEEKFAIYSQSRHTLIQEGY 281

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +L N     N+  Y      D +G G  A S +      + + 
Sbjct: 282 QAIGLDHFSLPDDPLTIALKNKTLIRNFQGYSLPPEEDLLGFGISATSFI----RGIYLQ 337

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    + + ++    A V+ + LS + +  ++++  L     +S  ++E       D 
Sbjct: 338 NVKDLREYSETIQAGKLATVKGKILSQDDKTRKWVIHTLMCSFSLSKLEFEQRFHERFDR 397

Query: 357 ECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +      ++  G I R   S L+ T  G   +  +    
Sbjct: 398 YFADSYDRLCGMESAGLI-RQDSSSLQVTPLGELFVRVIATAF 439


>gi|289678944|ref|ZP_06499834.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 409

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 144/396 (36%), Gaps = 28/396 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIF 75
             L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +   L   + +  + 
Sbjct: 1   RPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQMLACHLAPGQVVEQLH 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            GGGTP+ +    +  ++  +  ++ +    + +  IE +P   + +     R+ G NR+
Sbjct: 61  LGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRV 120

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP Q    +   + 
Sbjct: 121 SLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLPTQNPQTFSHTVD 180

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +    D LS++         F    +     LP     + +   T       G     
Sbjct: 181 KVIDLQPDRLSVFNYAHLPE-RFMPQRRIDVADLPDAESKLLMLERTVEQLGNAGYRYIG 239

Query: 253 ISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +    E            +   Y  +G  D IG+G  A S+V      +       
Sbjct: 240 MDHFALPDDELATAQEDLTLQRNFQGYTTHGHCDLIGLGVSAISQVGE----LYSQNSSD 295

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              +L+++  +  A       + + +    ++  L     +   + E     +       
Sbjct: 296 LNEYLRLLDSDQPATRRGLICNDDDRIRRAIIQQLICHFTLDFGEIEKTFCIDFRDYFSE 355

Query: 361 N------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                  +   G I   +   +     G  ++ +V 
Sbjct: 356 AWPQLLGMASDGLITLSETG-IEVRPAGRLLVRAVC 390


>gi|15612212|ref|NP_223865.1| coproporphyrinogen III oxidase [Helicobacter pylori J99]
 gi|4155741|gb|AAD06720.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE [Helicobacter
           pylori J99]
          Length = 345

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 104/328 (31%), Positives = 160/328 (48%), Gaps = 20/328 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E +IQ+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYIQALCLDLKHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +    I + I ++ ++S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVKAFERIFESIHQHASLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     + ++    +S DLIY  P    T  + EL+ A    ++
Sbjct: 121 REDKLLFLERQHSKNIAPVIEIIFKSGIENISIDLIYNTPLDNETSLKEELKLAKELPIN 180

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K           +  +VD  N+ + +        YE+SN++   
Sbjct: 181 HLSAYALSIEKNTNLEK--------NAKKPSSVDFDNVVREVLEGFFFKQYEVSNYAR-N 231

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  HNL YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 232 YQVKHNLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEM 348
           L+ + +  E L +GLR   G+ +   + 
Sbjct: 283 LNKQDKCLEKLFLGLRCELGVELSLLDE 310


>gi|315223926|ref|ZP_07865771.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea F0287]
 gi|314946098|gb|EFS98102.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea F0287]
          Length = 479

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/408 (19%), Positives = 152/408 (37%), Gaps = 21/408 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   + T   S   + +Y+H PFC   C +C  +  + +    +  +I++ L E Q
Sbjct: 59  KWLESLRKSYTESNSTEGISLYIHLPFCESLCTFCGCHKRITKRHEMEAPYIEAILKEWQ 118

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                   R  I  I  GGGTP+  EP  +  +++GI +    +   E + E +P++   
Sbjct: 119 LYTNFLKERPRIKEIHLGGGTPTFFEPLQLRRLIEGIFERADKADAHEFSFEGHPNNTTE 178

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + Q     G  R+S GVQ    +  + + R             AR I    +S DL++ 
Sbjct: 179 THLQTLYDLGFRRVSYGVQDYSPKVQKAIHRIQPFESVQRVTKQARAIGYTSVSHDLVFG 238

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+      + R+ +   D ++ Y                 D  +P+  V  +LY +
Sbjct: 239 LPFQTLDDVLFTIDRSNTLRPDRIAFYSYAHVPWIKGSGQRGFKDEDVPTGEVKRELYEV 298

Query: 239 TQSITSAHGLHAYEISNHSFL-----GAESLH--NLNYWRYGD-----YIGIGPGAHSRV 286
            +      G     + + +        A   H  + N+  Y        IG+G  + S  
Sbjct: 299 GKQYLLKAGYAEIGMDHFALPTDSMYKAFKNHQLHRNFMGYTASKTQVMIGLGMSSISDS 358

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +     EK  +++   + KN   V +   L+ E       ++ L  +   S  D 
Sbjct: 359 WYGFAQN----EKDLDAYYARLEKNEIPVCKGHILNKEDLIIRRHILNLMCQFTTSWNDE 414

Query: 347 EMLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +      ++    + +Q  G +  +  + +     G   + ++    
Sbjct: 415 SLQFPEITEVVAHLQEMQNDGLLH-IAGNHIEVPDEGKPFIRNICMAF 461


>gi|311695844|gb|ADP98717.1| oxygen-independent coproporphyrinogen III oxidase [marine bacterium
           HP15]
          Length = 472

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/402 (18%), Positives = 156/402 (38%), Gaps = 26/402 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-P 68
             +      L +Y H PFC   C YC  N  + + +     +++  L E     +L G  
Sbjct: 57  ARSKASGRPLSLYTHLPFCAHLCYYCACNKVITKKRDKAMPYVERVLKEAAIQSKLFGVD 116

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYR 126
           R ++ + +GGGTP+ +    +  ++ G  + + + +  E   ++E +P  V+ +      
Sbjct: 117 RPVTQLHWGGGTPTFLPKDVMEHLMAGYGELFNLQTGEERDYSVEIDPREVDQDTLPTLW 176

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G NRISLGVQ +  +  + + R    +   A ++ AR I F  ++ DLIY LP QT  
Sbjct: 177 NLGFNRISLGVQDVNPEVQKAVNRTQPRAMTEAVLNEARRIGFRSINLDLIYGLPYQTPE 236

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L+  +  + D LS++         FY   +     LPS    + + + T +    
Sbjct: 237 SFAETLEAVIEMSPDRLSVFSYAHLPE-RFYPQTRIQGDTLPSPQQKLAILHNTINRLLE 295

Query: 246 HGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRV 293
            G     + + +           E   + N+  Y      D + +G  A  +      + 
Sbjct: 296 AGYEYIGMDHFAKPDDSLAVAQREGRLHRNFQGYTTHSECDLVSLGVSAIGQTDDAYFQN 355

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              +     SW   +     A+ +   L+ + +   +++  L  +  +  + +  +   +
Sbjct: 356 NHDLP----SWEAAIDAGQLAITKGVNLTRDDRIRRWVIGQLICQFRLDRQLFADVWNED 411

Query: 354 LDIECERNLQR-----QGFIERVQFSRLRCTQRGMTMLDSVI 390
           L+      L R     Q  +     + L+    G  ++ ++ 
Sbjct: 412 LNRYFADELSRLKPMVQDELIADDGNALQVQPAGRLLIRAIC 453


>gi|17987576|ref|NP_540210.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|254693413|ref|ZP_05155241.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|256044352|ref|ZP_05447256.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113195|ref|ZP_05454063.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|260563704|ref|ZP_05834190.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|261213664|ref|ZP_05927945.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 3 str. Tulya]
 gi|265990767|ref|ZP_06103324.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265994603|ref|ZP_06107160.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 3 str. Ether]
 gi|17983281|gb|AAL52474.1| coproporphyrinogen iii oxidase, anaerobic 1 [Brucella melitensis
           bv. 1 str. 16M]
 gi|260153720|gb|EEW88812.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|260915271|gb|EEX82132.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 3 str. Tulya]
 gi|262765716|gb|EEZ11505.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001551|gb|EEZ14126.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 444

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 152/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVTDSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|1724130|gb|AAB38508.1| oxygen-independent coproporphyrinogen oxidase [Rhodobacter
           sphaeroides]
          Length = 452

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/390 (18%), Positives = 146/390 (37%), Gaps = 31/390 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
            + VY+H PFC + C +C   +   +     E ++ + L E++ ++  L        + +
Sbjct: 50  PISVYIHVPFCERLCWFCACPTQGTQTLAPVEAYVGTLLQELELVKKHLPAGVKAGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G
Sbjct: 110 GGGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q   +     +GR        A +   AR     ++ DL+Y LP Q        + + L
Sbjct: 170 IQDFTDIVQSAIGREQPFENTRACVETCARYGVHSLNTDLVYGLPHQNRESLAATIDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D ++++        +  +     + VLP++    +L NL   + +  G     I +
Sbjct: 230 QLGPDRVAIFGYAHVP-WMAKRQKLIDENVLPNDMERHELANLAAKMFTEGGFERIGIDH 288

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +                 N+  Y D      +GIG  + S+ + G  +   +      +
Sbjct: 289 FARPDDSMAVAARTGKLGRNFQGYTDDTCPTLLGIGASSISKFEQGYLQNTAAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVKDWEMLAGRNLDIEC- 358
           ++K + +          ++ E     +A E +M   RL     +       G   +    
Sbjct: 345 YIKAIEEGRLPAYRGHRMTDEDYLHGRAIEMIMCEFRL----DLPALRARFGEAAETMVP 400

Query: 359 ---ERNLQRQGFIERVQFSRLRCTQRGMTM 385
              E   +   FI   +   +     G  +
Sbjct: 401 RLTEAAAKFAPFITVDEAGSMSIEAEGRAL 430


>gi|161621239|ref|YP_001595125.1| coproporphyrinogen III oxidase [Brucella canis ATCC 23365]
 gi|260568655|ref|ZP_05839124.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
 gi|161338050|gb|ABX64354.1| oxygen-independent coproporphyrinogen III oxidase [Brucella canis
           ATCC 23365]
 gi|260155320|gb|EEW90401.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           suis bv. 4 str. 40]
          Length = 450

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++     +G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVQG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|330953784|gb|EGH54044.1| coproporphyrinogen III oxidase [Pseudomonas syringae Cit 7]
          Length = 460

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 149/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   + S  L +YVH PFC   C YC  N  + + +   + +++    EM+
Sbjct: 38  FDLLHALRES--RKASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLKRLEHEMR 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHDELRRLMAQLRSHFNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q    +   + + +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPAQNPQTFSHTVDKVIDLQPDRLSVFNYAHLPE-RFMPQRRIDAADLPDAASKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          +L+++  +  A         + +    ++  L     +   
Sbjct: 335 QVGE----LYSQNSSDLSEYLRLLDSDQPATRRGLICHDDDRIRRAIIQQLICGFTLDFG 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +      +       +   G I   +   +     G  ++ +V 
Sbjct: 391 NIEKTFCIDFRDYFSKAWPQLLGMASDGLITLSETG-IEVRPAGRLLVRAVC 441


>gi|83593839|ref|YP_427591.1| coproporphyrinogen III oxidase [Rhodospirillum rubrum ATCC 11170]
 gi|83576753|gb|ABC23304.1| coproporphyrinogen III oxidase, anaerobic [Rhodospirillum rubrum
           ATCC 11170]
          Length = 469

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/411 (18%), Positives = 166/411 (40%), Gaps = 31/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L A E        +   +Y+H  +C + C +C  ++ V +      +++ + L+E   
Sbjct: 56  QWLEALE------PGSPASLYLHVAYCAEMCWFCGCHTRVTKRYDPVADYLDALLSESAM 109

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  +L+GP  ++ + FGGGTP+++   +    +D +  ++ ++   EI +E +P +  ++
Sbjct: 110 VAKRLSGPLKVTHVHFGGGTPTILTADDFVRTIDTLRADFGLADVAEIAVEMDPRTATLD 169

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +   +AGV R S+GVQ  ++   + + R          I   R+     ++ DL+Y L
Sbjct: 170 YVKAMARAGVTRASIGVQDFKDDVQKAINRIQPIELVAQVIDWLRDNGISDINMDLVYGL 229

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT +     + +A++ A   +SL+        +   M    +  LP        Y   
Sbjct: 230 PHQTTSSVLHTIDQAIAMAPRRVSLFGYAHVP-WMKKHMRLIDEASLPDVPERWSQYLAA 288

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
            +   A G  A  + + +          +E + + N+  Y        IG+G      + 
Sbjct: 289 TAHFQALGYVAVGLDHFAAPDDEMARALSEGILHRNFQGYTTDTAPALIGLGASGIGYLP 348

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G     ++ E    ++ +++R    A      +S++      ++  L     + +    
Sbjct: 349 QG----YVANEGEIGAYKELIRGGSFATKRGIAVSTDDMVRRSVIERLMCDLAVDLGAVA 404

Query: 348 MLAGRNLD-----IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G   D     +    +L+  G + R +   +  T+ G  ++ +V A  
Sbjct: 405 REYGLPDDTFATELAAMDSLEGDGVLVR-EGGVVHITELGRPLVRAVCAKF 454


>gi|148654158|ref|YP_001281251.1| coproporphyrinogen III oxidase [Psychrobacter sp. PRwf-1]
 gi|148573242|gb|ABQ95301.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter sp.
           PRwf-1]
          Length = 522

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/422 (17%), Positives = 150/422 (35%), Gaps = 46/422 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----- 66
               +  L +Y H PFC   C YC  N  + +      +++     E++  R L      
Sbjct: 83  RRDPNAPLSLYFHIPFCRHLCYYCACNKIITKKNSDAGDYLAYLKNEVKQKRALLQRPDS 142

Query: 67  -GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN------------VEITIEAN 113
            G   +  +  GGGTP+    + +  +   +   +  +               + ++E +
Sbjct: 143 GGKPYVKQLHLGGGTPTFFSDEELTELWQFLQTQFEFAPTSVEQVSDEHPEMGDYSVEID 202

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMS 172
           P  +        R  G NR+S GVQ L+++    + R  + +   + +    R  F   +
Sbjct: 203 PREIRDTTLSVLRSLGFNRVSFGVQDLDDKVQIAVNRVQSEALIRSVMQETRRLGFQSTN 262

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY LP QT   +   +Q  +  + D LS++         F    +  +  LP+    
Sbjct: 263 IDLIYGLPHQTPQTFAKTVQTIIDISPDRLSIFNYAHLPD-RFKSQRQIKEEDLPTPAEK 321

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGP 280
           +++++ T +  +  G     I + +           + + + N+  Y      D +G G 
Sbjct: 322 LEMFSDTIAALNTAGYQYIGIDHFAKPDDSMAIAQRDGILHRNFQGYTILGDCDLLGFGV 381

Query: 281 GAHSRVKVGSHRVAISIEKHP-------ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
            + S++    +    +   H        + +  MV       V     S + +   +++ 
Sbjct: 382 SSISQINSTLYANKGNTSTHILQNHTDLKEYEAMVDAGKLPAVRHIKTSIQDRLRGYVIS 441

Query: 334 GLRLREGISVKDWEMLAGRNLDIECERNLQRQG------FIERVQFSRLRCTQRGMTMLD 387
            L   + I  KD     G +        +Q+ G       I+      +R   +G  +  
Sbjct: 442 NLLCHDYIDFKDLNQKFGIDAITFFIDEIQQLGEMQQDRLIDMDAAG-IRILPKGRLLAR 500

Query: 388 SV 389
           +V
Sbjct: 501 NV 502


>gi|261838549|gb|ACX98315.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 51]
          Length = 352

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 110/368 (29%), Positives = 168/368 (45%), Gaps = 31/368 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 10  LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLKHALSQT-DEPIESIFIGGGT 67

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  N  +SS+ EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 68  PNTLSVESFERIFESIYHNARLSSDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 127

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            E  L FL R H+ + A     ++++    +S DLIY  P  +    + EL+ A    ++
Sbjct: 128 REDKLLFLERQHSKNIAPVIETISKSGIENISIDLIYNTPLDSENSLKEELKLAKELPIN 187

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           HLS Y L+IEK T   K      L     +      N  + +        YE+SN++   
Sbjct: 188 HLSAYALSIEKNTNLEK--NAKKLSCTHFD------NTIKEVLEGFSFKQYEVSNYAR-N 238

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            +  H+L YW   DY+G G GA   V          IE + +  LK          + E 
Sbjct: 239 YQVKHHLAYWGAKDYLGCGAGAVGCVANERFYAKKLIENYIKDPLKR---------QVET 289

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           L+ + +  E L +GLR   G+ +          LD    R L  +     ++  RL  + 
Sbjct: 290 LNKQDKRLEKLFLGLRCVLGVELSF--------LDGNKVRFLIEENK-AFIKNDRLVASD 340

Query: 381 RGMTMLDS 388
               M D 
Sbjct: 341 --FFMADE 346


>gi|150378221|ref|YP_001314816.1| coproporphyrinogen III oxidase [Sinorhizobium medicae WSM419]
 gi|150032768|gb|ABR64883.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           medicae WSM419]
          Length = 450

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 77/403 (19%), Positives = 155/403 (38%), Gaps = 31/403 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            +L+A              +Y+H PFC   C YC  ++ + +      +++     E++ 
Sbjct: 37  DWLAAI------APEQKASLYLHIPFCRSMCWYCGCHTTITQRDQPILDYLDMLREEVRL 90

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  +   P SI  + FGGGTP++++P     ++  + + +  +S  EI +E +P ++E  
Sbjct: 91  VSAKTRAPISIDHVHFGGGTPTVMQPAEFRALVALLRERFEFASTTEIAVEIDPRTLEPE 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYAL 179
                 +AGV R SLGVQS +    + + R  +  + + A+  L ++    ++FDLIY L
Sbjct: 151 MATALGEAGVRRASLGVQSFDPVVQKAINRIQSEKQTMEAVSRLRQSGVGSINFDLIYGL 210

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+       + A+    +  +++       +         +  L      V      
Sbjct: 211 PHQTVESCIATAEAAIRMGPERFAVFGYAHIP-SFKKHQKLIDEHALAGAEGRVAQAEAI 269

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
            +   A G     + + +          A    + N+  Y        IG G  A  R+K
Sbjct: 270 AATLVAAGYRRIGLDHFALPDDGLAVAQARGQLHRNFQGYTTDACETLIGFGASAIGRMK 329

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +  +     P  + + +     A V+   ++ E +    ++  L    G+ V    
Sbjct: 330 DGYVQNEVP----PGLYAQRIASRRLATVKGYRMTPEDRLRASIIERLMCDFGVDVPALA 385

Query: 348 MLAGRNLDI-----ECERNLQRQGFIERVQFSRLRCTQRGMTM 385
              G + ++          L+  G I  +    +R  + G  +
Sbjct: 386 SAHGFDPEMLLRGNARLAMLESDG-ILDIADGVIRLREGGRFL 427


>gi|163846229|ref|YP_001634273.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222523979|ref|YP_002568449.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
 gi|163667518|gb|ABY33884.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222447858|gb|ACM52124.1| oxygen-independent coproporphyrinogen III oxidase [Chloroflexus sp.
           Y-400-fl]
          Length = 457

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 83/412 (20%), Positives = 153/412 (37%), Gaps = 28/412 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL+A  +       +SL VYVH PFC ++C YC  N+   R     ++++     E+  
Sbjct: 37  DYLAALAD--IAVTHDSLSVYVHLPFCAERCAYCGCNATSTRRPDVVDHYLDRIERELSM 94

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R +  + +GGGTP+ +       ++  +   +T+    E+ +E +P      
Sbjct: 95  VIAALGSNRRVVQLHWGGGTPNFLNEAQSRRLMGMLRTAFTLDPAAEVALEVDPRIGSRE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
               +R+ G NRIS GVQ +       +GR     +    +  AR+  F  ++ DL+Y L
Sbjct: 155 QIFLFRELGFNRISFGVQDIAPAVQVAIGRIQPLHQTETVVKAARDAGFCSINIDLVYGL 214

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT T +   LQ  +    D ++ +           +   D    LP+      L+   
Sbjct: 215 PYQTPTSFAATLQAMIDLRPDRIACFSYAHLPQARPNQKRVDAR-QLPTGYEKFQLFRQA 273

Query: 240 QSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYGDY-----IGIGPGAHSRVK 287
               +  G     + + +           E     N+  Y        IG G  A   + 
Sbjct: 274 IDTLTTVGYEWIGMDHFALASDELAVAARERRLQRNFMGYTVLPAPHQIGFGMSAIGDL- 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS----V 343
            G +   +  +     + + + +    ++    LS +       +M L     +     +
Sbjct: 333 AGRY---VQNDAGLGRYQRAIDEGQLPIIRGMRLSDDDLMRRQAIMHLMCNLEVPFDLAL 389

Query: 344 KDWEMLAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +    G  L  E ER         +  ++  RLR T+RG   + ++   L
Sbjct: 390 PPYGDRLGDVLAPEIERIAAYAADDLVA-IEPHRLRVTERGRFFIRNLAMEL 440


>gi|260425348|ref|ZP_05779328.1| oxygen-independent coproporphyrinogen III oxidase [Citreicella sp.
           SE45]
 gi|260423288|gb|EEX16538.1| oxygen-independent coproporphyrinogen III oxidase [Citreicella sp.
           SE45]
          Length = 451

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 162/395 (41%), Gaps = 24/395 (6%)

Query: 6   AYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-R 63
            +E+ +     N ++ +Y+H PFC + C +C   +         + ++ + ++E++ +  
Sbjct: 37  DFESWIEAIPENGTISLYLHVPFCRRLCWFCACRTQGTSTLSPVQAYVDTLVSELEMLKA 96

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +L     +S + +GGGTP+L+ P  +  ++D +      + + E ++E +P+ ++     
Sbjct: 97  RLPRGVKLSRLHWGGGTPTLLTPDLMKRLVDKVRDVADFTDHAEFSVEIDPNEIDGERLD 156

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
                G+NR S+GVQ  +EQ  + +GR        AA+ + R      ++ D++Y LP Q
Sbjct: 157 VLAAGGMNRASIGVQDFDEQIQQTIGRPQGYDVTRAAVEMIRERGVASLNADILYGLPHQ 216

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +  +    +Q+ LS+A D ++LY        +  +        LP+    +DL++  + +
Sbjct: 217 SRARITETVQKLLSFAPDRVALYGYAHVP-WMAKRQQMIPSDALPTPEERLDLFDTARRL 275

Query: 243 TSAHGLHAYEISNHSFLG-----AESLH--NLNYWRYGD-----YIGIGPGAHSRVKVGS 290
               G     I +          A+       N+  Y D      IG+G  + SR   G 
Sbjct: 276 FVWDGYAEIGIDHFGAPDDGLAIAQKTGKLRRNFQGYTDDTSDVLIGLGASSISRFPQGY 335

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            + A +      ++   +R+   A         E +    ++  L     I   +     
Sbjct: 336 AQNAPAT----GAYTAAIREGRFATSRGHAFRGEDRLRARMIEMLMCDFRIDKAELVRDF 391

Query: 351 GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           G +  +  E   +     E      ++ T+ G+ +
Sbjct: 392 GADASVLAEMFRRTSQLFE----GLVQITEDGLFL 422


>gi|171912967|ref|ZP_02928437.1| coproporphyrinogen III oxidase [Verrucomicrobium spinosum DSM 4136]
          Length = 447

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 155/394 (39%), Gaps = 27/394 (6%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIF 75
            LGVY H PFC K+C +C F  +  +       +I + + E      R     R    ++
Sbjct: 56  PLGVYFHIPFCRKRCHFCYFRVYTDKNAAEIRKYIHAGMEEFARYAARPYLQGRKPHFVY 115

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTPS +    +  + + +          E+  EA P ++     +  R+ GV R+SL
Sbjct: 116 FGGGTPSYLSVPQLQELTNRMKDLMPWDQAEEVAFEAEPGTLNEKKLEAIREIGVTRLSL 175

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GV+  ++  L   GR H + E   A   AR+  F  ++ DLI  +   T   W   + +A
Sbjct: 176 GVEHFDDHILESNGRAHRSGEIERAYRFARSLGFEHINIDLIAGMMNDTEELWRAAVAKA 235

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +    D +++YQ+ +   T  YK  +    +  P  +       +  +            
Sbjct: 236 VEMQPDCVTIYQMEVPYNTGIYKQMQTDGKVTAPVADWETKRAWVNYAFEEFVKTGYTVT 295

Query: 254 SNHS---------FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           S ++         F+  +SL     W   D + IG  +   +      + +  +     +
Sbjct: 296 SAYTVVKNPETIKFVYRDSL-----WEGADLLPIGVASFGHLGG----IHLQNQADIAPY 346

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL-- 362
           ++ + +   A+      S +++     ++ L+L   +    ++   G ++       L  
Sbjct: 347 IETIERGESAIFRAYATSPDERFIREFILKLKL-GSVKPSYYQTKFGEDVLTRFAPQLGW 405

Query: 363 -QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            Q +GF   +    +R T+ G+  +D ++    +
Sbjct: 406 MQNEGF-ATLGPDEIRLTRDGLLQVDRLLHEFFL 438


>gi|325274397|ref|ZP_08140486.1| coproporphyrinogen III oxidase [Pseudomonas sp. TJI-51]
 gi|324100469|gb|EGB98226.1| coproporphyrinogen III oxidase [Pseudomonas sp. TJI-51]
          Length = 460

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 154/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRES--RRAVRPLSLYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LIACHLAPKQRVEQLHFGGGTPTFLSHVELRQLMTTLRQHFHLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +     LPS    +++ 
Sbjct: 216 YGLPKQTPQGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDSSDLPSAAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
           + T    +A G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 HATIEQLTAAGYRYIGMDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +     A       + + +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLNTYQDSLTNAQLATQRGLLCNHDDRIRRAVIQQLICHFQLVYE 390

Query: 345 DWEMLAGRNLDIECER------NLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +     +        LQR G I       +R    G  +  SV 
Sbjct: 391 PIEQAFTIDFRGYFDHLWPELLTLQRDGLISLDDKG-IRILPAGRLLARSVC 441


>gi|297203016|ref|ZP_06920413.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148276|gb|EDY56043.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 489

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 87/396 (21%), Positives = 167/396 (42%), Gaps = 17/396 (4%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +   Q +    +Y+H PFC ++C +C F   +   +   E ++++   E+     LTG  
Sbjct: 48  DFLPQATRMCSIYLHIPFCEQRCTFCHFAKEILPPEQRVERYLRTLYAELAGTGALTGHP 107

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGY 125
           +  +++FGGGTPS + P+ I  +   + ++  V+++ E T E +PS +      +     
Sbjct: 108 TAQTVYFGGGTPSYLNPRQITEVFARLRESVQVTADTETTFELHPSVIGAPDYEDRLDAI 167

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            +AGVNR   GVQS+E++ L  L R H A++    +  LA      +S DLI+ LP Q +
Sbjct: 168 AEAGVNRWVFGVQSMEDRILEKLNRGHTAADVHRLLGMLADRGVENLSVDLIFGLPYQNL 227

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             W   +   ++  V+  +++ L  ++       +++   + P     + ++  T+ I  
Sbjct: 228 ENWYTTICSLVAAGVEKFNIFPLMFKQSDPISMHYRNSPEIFPGNRDRLLMHFATEIIMR 287

Query: 245 AHGLHAYEISNHSFLGAESLHNLN-YWRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHP 301
             G     +  ++     S    N Y    D   +  G      V    +    +I    
Sbjct: 288 EIGFRRGPLFYYAKTEHHSRQQENKYDSIEDINLLPFGVSGFGYVGQTQYYNECTI---- 343

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           +S+   V      V     L  +++    +M  LR   G+  +++ +  G +   +    
Sbjct: 344 DSYTAAVESGRPPVWRGARLDLDERMRRAVMFPLR-SAGVDREEFRLRYGVDPVDQFAGE 402

Query: 362 L---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L      G +E V   R++ T  G    DS+   LA
Sbjct: 403 LAPFVDHGLLE-VDDRRMQITDMGAPFADSIAIKLA 437


>gi|302830436|ref|XP_002946784.1| hypothetical protein VOLCADRAFT_42214 [Volvox carteri f.
           nagariensis]
 gi|300267828|gb|EFJ52010.1| hypothetical protein VOLCADRAFT_42214 [Volvox carteri f.
           nagariensis]
          Length = 428

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 118/430 (27%), Positives = 197/430 (45%), Gaps = 60/430 (13%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKV----------GQENFIQSFLTEMQWMRQLTGPR 69
             Y+H PFC +KC YCDF        V             ++I + L E+   R++ G  
Sbjct: 1   SAYIHLPFCKRKCFYCDFPVEAVGRDVSAPSAWEVEARMRSYIDTVLREIGSTRRI-GSG 59

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            ++++FFGGGTPSL+ P  +AL+++ +   + V++N E+++EA+P + +V   + YR+ G
Sbjct: 60  PLTTVFFGGGTPSLVPPPLLALLMESLDARFGVAANAEVSLEADPGTFDVERLRQYRQLG 119

Query: 130 VNRISLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           V R+S+GVQ+ +++ L   GR H+ A    A   +     P  S DLI  LP  T   W 
Sbjct: 120 VTRLSVGVQAFQQELLEACGRGHDLADVVAAVDAVQAAGMPSWSLDLISGLPGLTAEAWR 179

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             LQRA++ A DH+S+Y L +E+GT F +  + G L LP ++ AV++Y     +  A G 
Sbjct: 180 HSLQRAVAAAPDHVSVYDLQVEEGTPFSRWQRAGRLRLPPDDAAVEMYGEASELLRAAGY 239

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN++  G    HN  YWR   Y   G GA S +  G      S  +   +W++ +
Sbjct: 240 EHYEVSNYARRGHRCSHNQVYWRGLPYYAFGLGAASYL-AGRRFSRPSRMREYVAWVESL 298

Query: 309 RK--NGHAVVEKEFLSSE--QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL-- 362
                G   +    L +E  +   + LM+ LR  +G+ + +     G  +     R L  
Sbjct: 299 AAGGGGEGSLPGGHLPAESQELLLDTLMLRLRTADGLDLVELRNRFGTQVMGTVLRALAP 358

Query: 363 -QRQGFIERVQFS---------------------------------------RLRCT-QR 381
            +R+G +  +                                          R+R +   
Sbjct: 359 HERRGTVRALDGKDRACSLSAAALEAAAVTSAAPAPAVDLSGAVGFGGCGVPRVRLSDPA 418

Query: 382 GMTMLDSVIA 391
           G  + + +I+
Sbjct: 419 GFLLSNDIIS 428


>gi|77463890|ref|YP_353394.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides 2.4.1]
 gi|85700421|sp|P33770|HEMF_RHOS4 RecName: Full=Coproporphyrinogen-III oxidase, anaerobic 1;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|77388308|gb|ABA79493.1| Coproporphyrinogen III oxidase, oxygen-independent (HemN)
           [Rhodobacter sphaeroides 2.4.1]
          Length = 452

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 148/396 (37%), Gaps = 31/396 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            + VYVH PFC + C +C   +   +     E ++ + L E++ ++Q L        + +
Sbjct: 50  PISVYVHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKQHLPAGVKAGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G
Sbjct: 110 GGGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q   +     +GR        A +   R      ++ DL+Y LP Q        + + L
Sbjct: 170 IQDFTDIVQNAIGREQPFENTKACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   D ++++        +  +     + VLP +    +L NL   + +  G     I +
Sbjct: 230 SLRPDRVAIFGYAHVP-WMAKRQKLIDETVLPPDIERHELANLAARLFTEGGFERIGIDH 288

Query: 256 HSFLG------AESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +         A S     N+  Y D      +GIG  + S+ + G  +   +      +
Sbjct: 289 FALPDDSMAVAARSRKLRRNFQGYTDDTCPTLLGIGASSISKFEQGYLQNTAAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           ++K + +          ++ E     +A E +M    L     +       G   +    
Sbjct: 345 YIKSIEEGRLPGYRGHRMTEEDYLHGRAIEMIMCDFFL----DLPALRARFGEPAETMVP 400

Query: 360 RNLQRQG----FIERVQFSRLRCTQRGMTMLDSVIA 391
           R  +       F+       +   + G  +   +  
Sbjct: 401 RIAEAAEKFTPFVTVDADGSMSIAKEGRALARMIAR 436


>gi|224373238|ref|YP_002607610.1| coproporphyrinogen III oxidase [Nautilia profundicola AmH]
 gi|223588423|gb|ACM92159.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Nautilia profundicola AmH]
          Length = 365

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 162/379 (42%), Gaps = 40/379 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+     + +  +  +     Q++ ++       ++F GGGT
Sbjct: 15  LYIHIPFCDSKCNYCAFNSYTNINHLKK-KYFDAVKK--QFLHEIDTNTEFETVFIGGGT 71

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +       +   I  +  + +  EITIE NP++      +  +  G+NRIS GVQ+ 
Sbjct: 72  PSTMSVDFYEKLFKLI--SPNIKNAKEITIECNPNT-SYEWLKEIKNLGINRISFGVQTF 128

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+FL RNH+ ++A+ AI  A+   F  ++ DLIY+    T      +L  A S  V
Sbjct: 129 NEEKLKFLNRNHSPTQAVKAIENAKKAGFENINLDLIYSTALDTKKLLTKDLNTAFSLPV 188

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y LTIE+ T +             E + +      +          YEISN    
Sbjct: 189 THISAYSLTIEENTKWENDFSKRKY---DEELEIWFIEKIKE-----KFSQYEISNF--- 237

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE-----SWLKMVRKNGHA 314
           G   LHNL YW   +Y GIG GA    K         IE++        +LK   K  + 
Sbjct: 238 GKPCLHNLGYWMGKEYFGIGSGAVGFKKWRMENGEWKIERYYTQNSVYEYLKHPTKYKY- 296

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN--LQRQGFIERVQ 372
               E+LS E    E + +GLR   G           + ++I    N   +++  I    
Sbjct: 297 ----EYLSDEDIKKEKVFLGLRSIVGFDESILNKEEQKRVEILISENKLFKKENKIYSYD 352

Query: 373 FSRLRCTQRGMTMLDSVIA 391
                       + D++ +
Sbjct: 353 ----------FLLADAITS 361


>gi|116329572|ref|YP_799291.1| coproporphyrinogen III oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332461|ref|YP_802178.1| coproporphyrinogen III oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116122465|gb|ABJ80358.1| Coproporphyrinogen oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116127328|gb|ABJ77420.1| Coproporphyrinogen oxidase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 449

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 167/409 (40%), Gaps = 29/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L+   N +  + S SL +Y+H PFC   C +C  N+ + +    ++ ++++ LTE   
Sbjct: 35  EWLNKVRNRLRSENS-SLSLYLHIPFCETLCSFCGCNTSITKNHSVEDPYVETILTEYSN 93

Query: 62  MR---QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                     R +  I  GGGTP+ +  +N+  +L  I +   VSS  + ++E +P    
Sbjct: 94  YLIKIPEISQRELKEIHLGGGTPTYLSERNLEALLRSILERMNVSSVPDFSLEVDPRRTR 153

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +     G  RISLGVQ  + +  R + R            L+R +    ++FDLIY
Sbjct: 154 DTQLKVLHDFGFRRISLGVQDFDPEVQRLVNRTQPFEMTERITELSRKLGYTSVNFDLIY 213

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQ +   +  +++ L    D ++ Y        L        +  LPS     +LY 
Sbjct: 214 GLPKQNLKNMKRTVEKTLELRPDRIAFYSYAHVP-WLKAAQRLFTESDLPSGPEKRELYE 272

Query: 238 LTQSITSAHGLHAYEISNHSF--------LGAESLHNLNYWRYGD-----YIGIGPGAHS 284
           +++ +    G     + + +             +LH  N+  Y        +G+G  A S
Sbjct: 273 VSREMFLKAGYLEIGMDHFALESDSLSQAAKNGNLHR-NFMGYTSKTTDLLLGLGVSAIS 331

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
                 H+     EK  + + K VR+ G A      L  E      L++ L     + V 
Sbjct: 332 DSWDCFHQN----EKIVKKYQKRVREEGFATFRGHKLDEEDLIQRSLILQLSTTGTVIVP 387

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +      +++ +    +++    I R + + L  T++G   L +V   L
Sbjct: 388 E---RILQDVKLY-LASMEDDTLI-RWEGNLLSLTEKGRPFLRNVCTGL 431


>gi|66046652|ref|YP_236493.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257359|gb|AAY38455.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Pseudomonas
           syringae pv. syringae B728a]
          Length = 461

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 148/412 (35%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FELLHALRES--RKASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRRLMAQLRLHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q    +   + + +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPAQNPQTFSHTVDKVIDLQPDRLSVFNYAHLPE-RFMPQRRIDAADLPDAASKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QRTVEQLGNAGYRYIGMDHFALPDDELATAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          + +++  +  A       + + +    ++  L     +   
Sbjct: 335 QVGE----LYSQNSSDLSEYSRLLDSDQPATKRGLLCNDDDRIRRAIIQQLICHFTLEFG 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I   +   +     G  ++ +V 
Sbjct: 391 EIEKTFRIDFRDYFRDAWPQLLGMASDGLITLSETG-IEVRPAGRLLVRAVC 441


>gi|303232223|ref|ZP_07318922.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Atopobium vaginae PB189-T1-4]
 gi|302481633|gb|EFL44694.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Atopobium vaginae PB189-T1-4]
          Length = 443

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 103/417 (24%), Positives = 166/417 (39%), Gaps = 40/417 (9%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
                ++  +YVH PFC +KC YCDF S         +  ++ +  T+MQ +        
Sbjct: 17  RRDAHSAYSLYVHIPFCSQKCGYCDFASWPYAANTNDRARYLAAVCTDMQQLASWGLLCD 76

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           + + + GGGTP+ +  + +  ++  IA+     S VE + EANP S          ++ +
Sbjct: 77  VQTAYIGGGTPTCLGSK-LPELISSIAELC---SPVEFSCEANPDSTSDELLAQLAQSPL 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
            RISLGVQS  E+ LR LGR H A +A++ +  A      +S DL+ A+P QT   W   
Sbjct: 133 TRISLGVQSCHERELRALGRTHTARQALSRLRAAAAQGLCVSCDLMCAIPYQTPASWYQS 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L       + H+S+Y L IE  T F+K +        ++ V          I    G   
Sbjct: 193 LTLCCEQGISHISIYPLAIEPHTAFWKRYSSVHPAFNNDLVQAARMKAAARILQEAGFAR 252

Query: 251 YEISNHSF--------------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           YE+++++                     HN  YW    YIG+G  A S +    + +   
Sbjct: 253 YEVASYARVMSHDTHSAASAQVPLYACAHNRAYWTQEPYIGVGTSAASMLTAWQYDMLRK 312

Query: 297 IEKHPESWLKMVRKNGHAVVEK-----------------EFLSSEQQADEFLMMGLRLRE 339
                      V +    V +                  EF + EQ   E LM+  R   
Sbjct: 313 HTPQLPERTTSVARVRITVNDSRAHMCAYPGWQHRNLTLEFFNEEQCTAEDLMLQARCTC 372

Query: 340 GIS---VKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           GI    +     + G++        L+    I R +  R+  T+ G  M +++   L
Sbjct: 373 GIEPDLLAHAYDVFGKSTMDALLDELEHFSLILR-EDGRILPTEAGWLMGNALFERL 428


>gi|254701443|ref|ZP_05163271.1| coproporphyrinogen III oxidase [Brucella suis bv. 5 str. 513]
 gi|261751983|ref|ZP_05995692.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 5 str. 513]
 gi|261741736|gb|EEY29662.1| oxygen-independent coproporphyrinogen III oxidase [Brucella suis
           bv. 5 str. 513]
          Length = 444

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 85/393 (21%), Positives = 151/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    +  
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVDH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y +      IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCETLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|149194368|ref|ZP_01871465.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
 gi|149135543|gb|EDM24022.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
          Length = 450

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 80/399 (20%), Positives = 162/399 (40%), Gaps = 29/399 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           + +  + +Y H PFC   C +C  N         +  +I     E++   +     R + 
Sbjct: 39  KSNKPISLYFHLPFCKSACYFCGCNVVYTSKADKRRRYIDYLKKELKLWSKYLDTNRLVR 98

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+   P+ +  I + I   +    S+ EI++E +P   + N+ +  +K GVN
Sbjct: 99  QLHFGGGTPTFFTPEELEEIFELIYLYFKNFESDAEISVEIDPRFFDENHMKVLKKYGVN 158

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           R+S GVQ   EQ+ + + R         A+ +AR      ++ DLIY LP Q +  ++  
Sbjct: 159 RVSFGVQDFNEQTQKAVNRIQPFDLTKKAVDIARKYGINSINIDLIYGLPYQALETFKKT 218

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+       D L+++            M K  +  LP+    + ++  T      +G   
Sbjct: 219 LKLVKELNPDRLAVFNYAHVPWLKKG-MRKIDETTLPAPEEKLKIFKYTIDFFENNGYKM 277

Query: 251 YEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E         LH  N+  Y      D IGIG  + S       +     
Sbjct: 278 IGMDHFAKEDDELFKAIEKGELHR-NFQGYTTKGGADLIGIGLTSISETDKAYFQNY--- 333

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---- 353
            K  +++ K + +    +     L+ E    ++++M +       ++ +E   G N    
Sbjct: 334 -KDLKTYEKAIDEEKLPIFRGVKLNEEDLIRKYVIMEMMANFSFDIQRFEEKFGINFFEK 392

Query: 354 --LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              +I+      ++G +E +   ++  ++ G  ++ +++
Sbjct: 393 FEEEIKELEEFIKEGLVE-ITPKKINVSKTGSLLIRNIV 430


>gi|71066680|ref|YP_265407.1| coproporphyrinogen III oxidase [Psychrobacter arcticus 273-4]
 gi|71039665|gb|AAZ19973.1| coproporphyrinogen III oxidase, anaerobic [Psychrobacter arcticus
           273-4]
          Length = 514

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 151/410 (36%), Gaps = 34/410 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             +    L +Y H PFC   C YC  N  + +      +++   + E++    L  P   
Sbjct: 87  ERESHAPLSLYFHIPFCRHLCYYCACNKIITKKNSDAGDYLAYLIAEIKHKCSLLTPPEN 146

Query: 71  -----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQ 123
                +  +  GGGTP+ ++   +  + + +   +        + +IE +P  +     +
Sbjct: 147 GKKPLVKQLHLGGGTPTFLQDNELIELWEFLQTQFEFLPEDQGDYSIEIDPRELSGETLK 206

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQ 182
             R  G NRISLGVQ L+E     + R H+A      +  AR   F  ++ DLIY LP Q
Sbjct: 207 VLRHLGFNRISLGVQDLDETVQVAVNRVHSAKLIENVLLEARALGFHSINVDLIYGLPHQ 266

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                +  ++R +  + D LS++         F    +  +  LP+    + +   T + 
Sbjct: 267 MPETLDKTVRRIIEMSPDRLSVFNYAHLPE-RFKSQRQIKEADLPTPAAKLTMLGNTINT 325

Query: 243 TSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
            +  G     I + +           E   + N+  Y      D +G G  + S++   +
Sbjct: 326 LTEAGYQYIGIDHFAKPDDELAVAQREGKLHRNFQGYTIMGDCDLLGFGVSSISQIANAN 385

Query: 291 HRVAISIEKHPESWLKMVRKNGH-----AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
               +      + +   +    +       V     S + +  E+++M L   + +  +D
Sbjct: 386 SSYILQNHTDLQVYKDNIDAARYNATIMPAVNVIKTSIKDRLREYVIMNLLCHDYMDFRD 445

Query: 346 WEMLAGRNLDIECERNLQRQG------FIERVQFSRLRCTQRGMTMLDSV 389
                G +        +Q+ G       I+      +R   RG  +  +V
Sbjct: 446 INQKFGIDAITYFINEIQQLGQMQEDRLIDMDAAG-IRVLPRGRLLGRNV 494


>gi|14041195|emb|CAC38737.1| HemN2 protein [Bradyrhizobium japonicum]
          Length = 410

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 79/393 (20%), Positives = 153/393 (38%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC + C YC  ++ + R       + ++  +E+  + +  G R  +  I FGG
Sbjct: 9   SLYLHVPFCREMCWYCGCHTQIVRRDDLIAAYQRTLRSEIALVAETIGRRIKVEHIHFGG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++ P+  A ++  + + + V  + EI +E +P ++  +  +  R +GVNR SLGVQ
Sbjct: 69  GTPTIMAPEAFAELMAAMRQAFFVLPSAEIAVEIDPRTLTADMVEAMRLSGVNRASLGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +    R + R  +  +  A + + R+     ++FDLIY LP QT+      ++R+L  
Sbjct: 129 SFDPIVQRAINRIQSFEQTAAVVDMLRHAGIAGINFDLIYGLPHQTVASCLDTVRRSLLL 188

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D  S++                    LP      D      +     G     + + +
Sbjct: 189 APDRFSVFGYAHVPD-FKKHQRMINQGALPDGPARHDQACAIANALKEAGYVQIGLDHFA 247

Query: 258 FLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E     N+  Y        +G G  A   +  G  +  + I     ++ 
Sbjct: 248 RPDDSMAVAFEERTLRRNFQGYTTDQGEVLLGFGASAIGHLPQGYVQNEVQI----GAYA 303

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-----ER 360
           + +  +  A  +   L+ + +    ++  +       + D     G   +         +
Sbjct: 304 QSIGASRLATAKGYGLTDDDRLRADIIERIMCEFSADLGDICARHGAEPEAMLKSASRLK 363

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G + R+   RL        ++ SV A  
Sbjct: 364 PLISDG-VVRLDGDRLAVANDSRFLVRSVAAAF 395


>gi|152996256|ref|YP_001341091.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas sp.
           MWYL1]
 gi|150837180|gb|ABR71156.1| oxygen-independent coproporphyrinogen III oxidase [Marinomonas sp.
           MWYL1]
          Length = 456

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/410 (18%), Positives = 157/410 (38%), Gaps = 30/410 (7%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-Q 64
           A  + M       L +Y H PFC   C YC  N  V +       +++    EM+     
Sbjct: 35  ALIDKMLTPSEAPLSLYFHIPFCAHLCYYCACNKIVTKQYDKGAEYVELLGEEMRLRSLM 94

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNF 122
           L   R ++ + FGGGTP+ +  + I ++ + I +++ +      + +IE +P  +  +  
Sbjct: 95  LDHSRQVTQLHFGGGTPTFLTEELIEVLFENIQQHFNLINDGTQDYSIEIDPREISRSKL 154

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           +   K G+NRIS+GVQ  + +    + R          +  AR +    ++FDLIY LP 
Sbjct: 155 ELLTKKGINRISIGVQDFDIKVQEAIHRVQPVQMVTELVTDARELGIKSINFDLIYGLPY 214

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q++  +   L + ++ + + +SL+         F    +  D  LP  ++ +DL  ++  
Sbjct: 215 QSIEGFRETLAQVIALSPERISLFNYAHLPD-RFRAQRRISDDSLPISSMKLDLLKMSIE 273

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
              A G     + + +           +     N+  Y      D +  G  A S +   
Sbjct: 274 YLIAAGYDYIGMDHFAKPTDSLAIAQKQGKLQRNFQGYTTHAGTDLVAFGVSAISDLNG- 332

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
              V I        +   + +   A+ +      + +    ++M L  +  ++    E  
Sbjct: 333 ---VYIQNHTDLSIYRSSIERGQLAIAKGYISDLDDRIRHQVIMTLISQFELNTATIEQK 389

Query: 350 AGRNLDIECERNLQ------RQGFIERVQFS---RLRCTQRGMTMLDSVI 390
                       ++      + G ++  +      ++ T+RG  ++  + 
Sbjct: 390 YNIRFFEYFSEEMENLTPMTKDGMLDIDRSGMQTTIKVTERGRLLIRCIC 439


>gi|34558032|ref|NP_907847.1| coproporphyrinogen III oxidase [Wolinella succinogenes DSM 1740]
 gi|34483750|emb|CAE10747.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE (HEMN) [Wolinella
           succinogenes]
          Length = 346

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 111/371 (29%), Positives = 168/371 (45%), Gaps = 38/371 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC  KC YC F+S           ++Q+ L  ++          I S++FGGGT
Sbjct: 3   LYFHIPFCASKCGYCAFDSR-SAPSSWHAPYMQALLVALKSELAKLKEERIESVYFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+L++      + +    +  +S   EITIEANP S+  +  +     GVNR+SLGVQS 
Sbjct: 62  PTLLDSHLFEPLFE--RFSPYLSKEAEITIEANPRSLTPSWAERMHSFGVNRVSLGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           E + L +L R+H   E   A+  L +     +S DLIY  P  + T    E+QRA +  +
Sbjct: 120 ERKKLAWLERDHGEGEIERAMESLLKARIKHISIDLIYDTPLDSPTLLSKEIQRASTLPI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           DHLS Y LT+E+G+ F+   +                +L +      G   YE+SN++  
Sbjct: 180 DHLSAYSLTLEEGSRFFAKGQ-------KGMEGESYASLVRERLGEDGFVQYEVSNYAR- 231

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G  S HNL YW   DYIG+G GA   +    +  A  IE++ +  L           E+E
Sbjct: 232 GYRSSHNLGYWMAKDYIGVGAGAVGCLGGVRYYPAKEIERYIKEPL---------WREEE 282

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCT 379
            LS E +  E L +GLR   GI+  +         +      L   G +           
Sbjct: 283 PLSHEDKRLERLFLGLRSEVGIAPHE--------ANRSKLELLLSGGKVRE--------- 325

Query: 380 QRGMTMLDSVI 390
           +RG  + + + 
Sbjct: 326 ERGRILANDLF 336


>gi|146277024|ref|YP_001167183.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17025]
 gi|160359134|sp|P95651|HEMN_RHOS5 RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|145555265|gb|ABP69878.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 452

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 145/386 (37%), Gaps = 23/386 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFF 76
            + VY+H PFC + C +C   +   +     E ++ + L E++ ++  L        + +
Sbjct: 50  PISVYIHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKKHLPAGVKAGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G
Sbjct: 110 GGGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q   +     +GR        A +   R      ++ DL+Y LP Q        + + L
Sbjct: 170 IQDFTDIVQSAIGREQPFENTRACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D ++++        +  +     + VLP++    +L NL   + +  G     I +
Sbjct: 230 QLGPDRVAIFGYAHVP-WMAKRQKLIDENVLPNDMERHELANLAAKMFTEGGFERIGIDH 288

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +                 N+  Y D      +GIG  + S+ + G  +   +      +
Sbjct: 289 FARPDDSMAVAARSGKLRRNFQGYTDDTCPTLLGIGASSISKFEQGYLQNTAAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           ++K + +          ++ E     +A E +M   RL        +   A   +    E
Sbjct: 345 YIKAIEEGRLPGYRGHRMTDEDYLHGRAIEMIMCEFRLDLPALRARFGEAAETMVPRITE 404

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTM 385
              +   FI   +   +     G  +
Sbjct: 405 AAAKFAPFITVDEAGSMSIEAEGRAL 430


>gi|195541881|gb|ACF98082.1| putative coproporphyrinogen III oxidase [uncultured bacterium 1042]
          Length = 457

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 83/396 (20%), Positives = 158/396 (39%), Gaps = 32/396 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            +L A          + + +YVH P+C + C +C  N+ + R       ++QS L E+  
Sbjct: 44  DWLEAL------AAGDEVSLYVHVPYCDRLCWFCACNTRITRRYEPVAAYLQSLLAEIAT 97

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G +  + S+ FGGG+P++++PQ+I  +   +   +    + E+++E +P+ ++  
Sbjct: 98  IAGAVGGKAKVRSVHFGGGSPTMLKPQDIVALDRSMRGAFDYLPDAEVSVEIDPNDMDEA 157

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
            F      G++R+SLGVQ  + +  + + R  +  +  A +          ++ DL+Y L
Sbjct: 158 RFDALAAIGLSRVSLGVQDFDPKVQKAINRLQSFEQTRAVVEGTRARGVRSVNLDLLYGL 217

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNL 238
           P QT       +++ALS   D ++L+         F K     D   LP     +     
Sbjct: 218 PHQTCESVAATMEQALSLQPDRIALFGYAHVP--WFKKHQTMIDEAWLPDGAARLAQSQT 275

Query: 239 TQSITSAHGLHAYEISNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSRV 286
             S+  A G  A  + + +      A +  N     N+  Y D      IG+GP + SR 
Sbjct: 276 AASLVQARGYQAVGLDHFAKPDDTLAVAARNGTLRRNFQGYTDDRCETLIGLGPSSISRF 335

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           + G  + A +       + + + + G A       S   +   +++  L      S  + 
Sbjct: 336 RQGYAQNAAAT----ADYQRRIGEKGMATARGIAFSDGDRLRSWVIERLMCDFAFSATEA 391

Query: 347 EMLAG---RNLDIECERNLQR--QGFIERVQFSRLR 377
               G     L  E          G +ER     + 
Sbjct: 392 VARFGNAALPLLDEAAAYAVSDTDGLLERHGDDFVV 427


>gi|218670664|ref|ZP_03520335.1| coproporphyrinogen III oxidase [Rhizobium etli GR56]
          Length = 231

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 126/207 (60%), Positives = 160/207 (77%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKETAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMQPETVAAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NR+SLGVQ+L ++ L+FLGR H+ ++A+ AI LAR+IFPRMSFDLIYA P QT+  WE E
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADALKAIVLARDIFPRMSFDLIYARPDQTVEDWERE 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
           L+ A++YAVDHLSLYQLTIE+GT   +
Sbjct: 196 LKHAIAYAVDHLSLYQLTIEEGTPLLR 222


>gi|299138769|ref|ZP_07031947.1| HemN domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599405|gb|EFI55565.1| HemN domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 354

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 94/355 (26%), Positives = 155/355 (43%), Gaps = 22/355 (6%)

Query: 55  FLTEMQWMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
              E+   ++         P S+ +++FGGGTPSL+ P  +  I   + +N+ V+ + EI
Sbjct: 2   LCGEIDAAKKAAASLGADLPGSVGTVYFGGGTPSLLAPSQLREIFAALRRNFEVAGDAEI 61

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNI 167
           T+E+ P  +         + GVNR+SLGVQS  ++    +GR H         + L    
Sbjct: 62  TLESAPGQIADELLAEAMRLGVNRVSLGVQSFVDRESAAVGRLHTERECVREILRLRAAG 121

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-----HKDG 222
            P +  DLI  LP QT   +   L+ A    + HLS+Y L +++ +   +       +  
Sbjct: 122 LPEVGADLIAGLPYQTEESFAHSLEVASGVGLTHLSVYMLEVDEDSRLGREVLAGGQRFH 181

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
              +P E +A  LY    ++    G   YEISN +    +S HN  YW+   Y+G G  A
Sbjct: 182 AHGVPQEEIAATLYEQACAMLPQQGFAQYEISNFAAEEHQSRHNKKYWQRAPYMGFGLDA 241

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           HS +  G   V  +  +    +   +        E   +   +  +E + +GLR+ EGIS
Sbjct: 242 HSMLLRGVGAVRFANPEELADYRAAM------PAEPTLVGVREAFEETVFLGLRMTEGIS 295

Query: 343 VKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++         L     E  R L  +G +   +  R R T RG  + + V  +L 
Sbjct: 296 MQQLRSEFAEELVAPYEEAVRELVDEGLM-LAEEDRWRLTLRGRLVSNEVFGHLL 349


>gi|27382197|ref|NP_773726.1| coproporphyrinogen III oxidase [Bradyrhizobium japonicum USDA 110]
 gi|29840775|sp|O31381|HEMN_BRAJA RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|27355368|dbj|BAC52351.1| anaerbic coproporphyrinogen III oxidase [Bradyrhizobium japonicum
           USDA 110]
          Length = 450

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 79/393 (20%), Positives = 153/393 (38%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC + C YC  ++ + R       + ++  +E+  + +  G R  +  I FGG
Sbjct: 49  SLYLHVPFCREMCWYCGCHTQIVRRDDLIAAYQRTLRSEIALVAETIGRRIKVEHIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++ P+  A ++  + + + V  + EI +E +P ++  +  +  R +GVNR SLGVQ
Sbjct: 109 GTPTIMAPEAFAELMAAMRQAFFVLPSAEIAVEIDPRTLTADMVEAMRLSGVNRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +    R + R  +  +  A + + R+     ++FDLIY LP QT+      ++R+L  
Sbjct: 169 SFDPIVQRAINRIQSFEQTAAVVDMLRHAGIAGINFDLIYGLPHQTVASCLDTVRRSLLL 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D  S++                    LP      D      +     G     + + +
Sbjct: 229 APDRFSVFGYAHVPD-FKKHQRMINQGALPDGPARHDQACAIANALKEAGYVQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E     N+  Y        +G G  A   +  G  +  + I     ++ 
Sbjct: 288 RPDDSMAVAFEERTLRRNFQGYTTDQGEVLLGFGASAIGHLPQGYVQNEVQI----GAYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-----ER 360
           + +  +  A  +   L+ + +    ++  +       + D     G   +         +
Sbjct: 344 QSIGASRLATAKGYGLTDDDRLRADIIERIMCEFSADLGDICARHGAEPEAMLKSASRLK 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G + R+   RL        ++ SV A  
Sbjct: 404 PLISDG-VVRLDGDRLAVANDSRFLVRSVAAAF 435


>gi|120556010|ref|YP_960361.1| coproporphyrinogen III oxidase [Marinobacter aquaeolei VT8]
 gi|120325859|gb|ABM20174.1| oxygen-independent coproporphyrinogen III oxidase [Marinobacter
           aquaeolei VT8]
          Length = 469

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 154/401 (38%), Gaps = 28/401 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
           +      + +Y H PFC   C YC  N  + + +     +++  L E     +L G  R 
Sbjct: 56  SKAAGGPISLYTHLPFCAHLCYYCACNKVITKKRDKAMPYVERVLKEAAIQSKLFGADRP 115

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  + +GGGTP+ +    +  ++ G  + + +    + + ++E +P  V+ +      + 
Sbjct: 116 VKQLHWGGGTPTFLPRDVMQHLMAGYGELFNLQSGDDRDYSVEIDPREVDEDTLSTLWEL 175

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NRISLGVQ +  +  + + R        + ++ AR+I F  ++ DLIY LP QT   +
Sbjct: 176 GFNRISLGVQDVNPEVQKAVNRIQPRDMTESVLNEARHIGFRSINLDLIYGLPYQTPESF 235

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+  +  + D LS++         FY   +     LPS    + + + T +     G
Sbjct: 236 AETLESVIEMSPDRLSVFSYAHLPD-RFYPQTRIQADTLPSPQQKLTILHNTINRLLEAG 294

Query: 248 LHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAI 295
                + + +           E   + N+  Y      D + +G  A  +      +   
Sbjct: 295 YEYIGMDHFAKPDDSLAVAQREGRLHRNFQGYTTHSDCDLVSLGVSAIGQTDDAYFQNNH 354

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
            +     SW   +     A++    L+ + +   +++  L  +  +  K +      + D
Sbjct: 355 DLP----SWEASIDAGQLAIIRGVGLTRDDRIRRWVIGQLICQFRLDRKQFAEQWNEDFD 410

Query: 356 IEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                     + + +   +     S L+    G  ++ ++ 
Sbjct: 411 RYFADEMNRLKPMIQDELVADCD-SLLQVQPAGRLLIRAIC 450


>gi|330964660|gb|EGH64920.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 460

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 151/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E++
Sbjct: 38  FELLHALRES--RKALRPLSLYVHIPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIR 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++T+    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHDELRRLMARLRTHFTLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+SLGVQ L+    R + R  +  +  A +  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEDTRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP  +  + + 
Sbjct: 216 YGLPRQTPQGFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDAADLPDAHTKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +  G     + + +    E            +   Y  +G  D IG+G    S
Sbjct: 275 ERTVEQLTNAGYRYIGMDHFALPDDELAIAQEELTLQRNFQGYTTHGHCDLIGLGVSGIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          + +++  +  A       S + +    ++  L     ++  
Sbjct: 335 QVGD----LYSQNSSDLTDYQRLLDSDQPATRRGLICSEDDRIRRAVIQQLICHFTLNFS 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I     + +     G  ++ SV 
Sbjct: 391 ELEKAFTISFRDYFADAWPHLLCMANDGLIALSDGA-IEVRPAGRLLVRSVC 441


>gi|2597840|emb|CAA05507.1| anaerbic coproporphyrinogen III oxidase [Bradyrhizobium japonicum]
          Length = 450

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 152/393 (38%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC + C YC  ++ + R       + ++  +E+  + +  G R  +  I FGG
Sbjct: 49  SLYLHVPFCREMCWYCGCHTQIVRRDDLIAAYQRTLRSEIALVAETIGRRIKVEHIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++ P+  A ++  + + + V  + EI +E +P ++  +  +  R +GVNR SLGVQ
Sbjct: 109 GTPTIMAPEAFAELMAAMRQAFFVLPSAEIAVEIDPRTLTADMVEAMRLSGVNRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +    R + R  +  +  A + + R+     ++FDLIY LP QT+      ++R+L  
Sbjct: 169 SFDPIVQRAINRIQSFEQTAAVVDMLRHAGIAGINFDLIYGLPHQTVASCLDTVRRSLLL 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A D  S++                    LP      D      +     G     + + +
Sbjct: 229 APDRFSVFGYAHVPD-FKKHQRMINQGALPDGPARHDQACAIANALKEAGYVQIGLDHFA 287

Query: 258 FLG------------AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                            + H     +    +G G  A   +  G  +  + I     ++ 
Sbjct: 288 RPDDSMAVAFEERTLRRNFHGYTTDQGEVLLGFGASAIGHLPQGYVQNEVQI----GAYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-----ER 360
           + +  +  A  +   L+ + +    ++  +       + D     G   +         +
Sbjct: 344 QSIGASRLATAKGYGLTDDDRLRADIIERIMCEFSADLGDICARHGAEPEAMLKSASRLK 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G + R+   RL        ++ SV A  
Sbjct: 404 PLISDG-VVRLDGDRLAVANDSRFLVRSVAAAF 435


>gi|315453265|ref|YP_004073535.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           felis ATCC 49179]
 gi|315132317|emb|CBY82945.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           felis ATCC 49179]
          Length = 455

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 78/409 (19%), Positives = 159/409 (38%), Gaps = 31/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             + A E   T      L +Y H PFC   C +C  N      +  +E++I     E++ 
Sbjct: 36  DLIQALERTPT---QTPLSLYFHLPFCKSPCYFCACNVIYSSSERKKEHYILYLQKELEL 92

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALIL-DGIAKNWTVSSNVEITIEANPSSVEV 119
           +++     R +  + FGGGTP+    + +  I+ +  A     + + E+  E +P     
Sbjct: 93  LKRYLDTGREVVQLHFGGGTPTFFSAEQLERIIKNIEATFSNFAPDAELACEVDPRHFNR 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYA 178
           +  +  ++ G NR+S GVQ  E +  + + R  N       + LAR      ++FDLIY 
Sbjct: 153 DQMRVLKEHGFNRLSFGVQDFELEVQQAINRLQNFDLVREKVELAREFGINSLNFDLIYG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q++  +E  L++ L    D L+++              K     LP+ +  +++   
Sbjct: 213 LPFQSVASFEATLKQVLQLNPDRLAIFNYAHVP--WIKHTMKIDPATLPTPSQKLEILRF 270

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRV 286
             +  + HG     + + +    E   +L N     N+  Y        IG+G  +    
Sbjct: 271 LITFLTQHGYEMIGMDHFAKKDNELYLALQNKQLRRNFQGYTTKKFSQTIGVGVTSIG-- 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       K  +++   + +    V     LS+E +  + ++M L     +     
Sbjct: 329 --EGLDYYTQNFKDLKAYENALNEGHLPVERGIALSAEDRLRKEVIMHLMNNLELDFSTI 386

Query: 347 EMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E     +        +E  +  +++G +  +    L+ +  G  ++ ++
Sbjct: 387 ERAFNIDFKTHFKQALEALKPYEQEGLVS-MDAQGLKTSPTGAMLVRNI 434


>gi|224012891|ref|XP_002295098.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969537|gb|EED87878.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 520

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 112/466 (24%), Positives = 188/466 (40%), Gaps = 75/466 (16%)

Query: 5   SAYENNMTGQGSN----SLGVYVHWPFCVKKCPYCDFN--------SHVRRYKVGQENFI 52
           S +EN++  + ++    S G+YVH P+C ++C YCDF         +H   ++     + 
Sbjct: 48  SPHENDVQAKDNSNRDISYGLYVHIPYCRRRCKYCDFAIVPIGKDQTHNIGFQQMDLTYR 107

Query: 53  QSFLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAK------NWTVSSN 105
           QS + E+  +   T  +  + SI+FGGGTPSL     +  I+  + +            +
Sbjct: 108 QSVVDEISLIGSTTPNKIPLRSIYFGGGTPSLAPLTTLREIMRALLEPDDAPFYLENEGD 167

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            EITIE +P +  +   +  +  G NRISLGVQS ++  L  +GR H +++   +I + +
Sbjct: 168 AEITIEMDPGTFNLTYLEAIKAMGFNRISLGVQSFDDDILATMGRVHRSADVYRSIEMIQ 227

Query: 166 NIF----PRMSFDLIYALPKQTMTQWEMELQRALSYAVD--HLSLYQLTIEKGTLFYKMH 219
            +F       S DLI  +P  T+  W   L  A+       H+SLY L +E+GT F K++
Sbjct: 228 EVFGEEDSNYSIDLISGVPGLTLAGWTETLYNAVRLHPRPLHISLYDLQVEQGTYFGKIY 287

Query: 220 KD-----------------------GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D                           LPS      +Y        +     YEIS++
Sbjct: 288 GDGRKEDSSTAAPVVVASSKSGNATTHPFLPSSEDCAFMYRYASGYLRSKRYQHYEISSY 347

Query: 257 SF-----LGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEKHP-------ES 303
           ++     L   S HN  YW   G +  IG G+ S V         ++  +        E+
Sbjct: 348 AYVDDDGLAHRSKHNQIYWEVGGQWYAIGLGSTSNVDGVRFARPRALSDYISWTRELKEA 407

Query: 304 WLKMVRKNGHAVV-----EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           + K V      +       +E +  E    + +M  LR  EG+ +         +     
Sbjct: 408 YGKDVNAEPPWLQSSNGNGEENVGGEDDISDIIMTRLRTSEGLDLDWIAEHYDTSHVEAI 467

Query: 359 ERNLQ---RQGFIERVQFSR-----LRC-TQRGMTMLDSVIANLAV 395
               +        ERV  S      +R     G    +++I+N+ V
Sbjct: 468 LGGFELALDLDLGERVGNSTERVGLIRLKDPNGFLFSNNIISNIFV 513


>gi|228471848|ref|ZP_04056619.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228276778|gb|EEK15481.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 453

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 76/409 (18%), Positives = 154/409 (37%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   + T   S   + +Y+H PFC   C +C  + H+ +    ++ +IQ+ L E +
Sbjct: 33  KWLDSVRTSFTESNSTQGISLYIHLPFCESLCTFCGCHKHITKRHEMEDPYIQNVLKEWR 92

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
               +   R  I  I  GGGTP+   P+N+  ++D I +    +   + + E +P++   
Sbjct: 93  LYLAVLPSRPRIKEIHLGGGTPTFFSPENLQYLIDQIFEGADRAEGFQFSFEGHPNNTTR 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYA 178
            + Q     G  R+S GVQ    +  + + R    +        AR I    +S DL++ 
Sbjct: 153 EHLQRLYDLGFTRVSYGVQDYSPEVQKAIHRIQPFANVERVTLQAREIGYSSISHDLVFG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q        +        D +S Y                 +  LP+ +    LY +
Sbjct: 213 LPFQKEEDMRYTIDCTNRLRPDRISFYSYAHVPWVKGTGQRGFDENDLPTPDQKRHLYEI 272

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
            +     +G     + + +    E        +LH  N+  Y        IG+G  A S 
Sbjct: 273 GKQQLLDNGYIEIGMDHFALPSDEMYESFVRGTLHR-NFMGYTASKTQLMIGLGISAISD 331

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  +   ++    + + +++ ++   V     LS E       ++ L  +   S + 
Sbjct: 332 SWYGFAQNVKTV----KEYEEVLSQDRIPVYRGHILSEEDLILRRHILNLMCQFHTSWEA 387

Query: 346 WEMLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++      +++     +++ G I  +    +  T  G   + ++    
Sbjct: 388 PQLQFAEAEEVKMRLSEMEKDGLIHILPQG-IEVTDVGKPFVRNICMAF 435


>gi|83859099|ref|ZP_00952620.1| coproporphyrinogen III oxidase [Oceanicaulis alexandrii HTCC2633]
 gi|83852546|gb|EAP90399.1| coproporphyrinogen III oxidase [Oceanicaulis alexandrii HTCC2633]
          Length = 447

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 138/391 (35%), Gaps = 20/391 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             + +Y+H P+C   C YC  N+         E +++  L E+  +      R  +S + 
Sbjct: 48  KPISLYLHVPYCKSLCWYCGCNTRATTQDGPIEAYLKVLLKELALVADRLPGRMRVSHLA 107

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+++ P  +  ++  I   +      E  IE +P     ++ Q   + G  R S 
Sbjct: 108 LGGGTPAILNPDQMDRLMAAIYDRFEFEEGAERAIEIDPCHFSKDDAQALARNGFTRAST 167

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS +    R + R        A+ +  R     +++ DL+Y LP QT        + A
Sbjct: 168 GVQSFDPAVQRAINRIQPYEVVEASFNRLREAGVMKINADLLYGLPLQTADSARASAEAA 227

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +   D L+++        +        D  LP     +   +  +      G     I 
Sbjct: 228 AALNPDRLAVFGYAHVPH-MKSHQRLIKDEALPGAKARLAQADAMEHALIECGYALIGID 286

Query: 255 NHSFLG---AESLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           +++      A++L N     N+  Y        I +G  A  R   G  +    +     
Sbjct: 287 HYARPDDPMAQALENGTLRRNFQGYTTDKADTLIALGASAIGRTPHGYVQNRSDV----R 342

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           SW++ V      V +   ++ E      ++  +     +  +    L  R        +L
Sbjct: 343 SWMQDVEAGRLPVGKGVEVTREDAMRAAIIEQVMTYLRVDPEAVAALYDRPAPQADLDDL 402

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            R G +  V+   +        +   V A  
Sbjct: 403 VRSG-VVSVEGGVITVNPAYRPLARLVAAAF 432


>gi|332663092|ref|YP_004445880.1| Radical SAM domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332331906|gb|AEE49007.1| Radical SAM domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 440

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 80/388 (20%), Positives = 162/388 (41%), Gaps = 17/388 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            + + +L +YVH PFC  +C +C+  +        +E +I +  T+   +++  GP   +
Sbjct: 40  DEPTENLFLYVHVPFCEMRCGFCNLFTVANPKGNVEEQYIHALKTQATIVKEEIGPSQFA 99

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVN 131
            +  GGGTP+ +E   +  +   I  N   ++ +V  + E +P ++         + GV+
Sbjct: 100 RLAVGGGTPTFLELPLLEQLFSIIQHNMETNTRDVPFSFEMSPKTITPEKLNFLYQNGVD 159

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+G+QS  E   + LGR     E   A+ + R + F  ++ DLIY    Q    W   
Sbjct: 160 RVSIGIQSFVENEQKTLGRPQKNKEVFDALAMIRAVDFKTLNLDLIYGAYGQNADSWLFS 219

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ A++Y  + + +Y L     T   KM K+        +    LY L +   ++ G   
Sbjct: 220 LQSAMAYKPEEIFIYPLYTRPLTGIEKMAKN------EIDNRFHLYLLAKEYLTSQGYEQ 273

Query: 251 YEISNHSFLGAES-LHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPES 303
             +        +    NL Y    D  +G+G GA S  K   +       + +++   ++
Sbjct: 274 ISMRMFRLKSIDKTADNLQYCCQEDGMLGLGAGARSYTKYVHYSSEYAVGSKNVKSIIQN 333

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERN 361
           ++     +         L+ +++   +L+  +    G+  + ++     ++  D      
Sbjct: 334 YIAKTSVDYAVADYGIKLNDDERKRRYLIKSILQVAGLDKRQYQAFFKSDVLADYPQLIQ 393

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
           L   G       + +R T  G+ + D++
Sbjct: 394 LIESGLCFIENDTYIRLTSEGIDLSDAI 421


>gi|330972469|gb|EGH72535.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 460

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 148/412 (35%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FELLHALRES--RKASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHDELRRLMAQLRLHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP Q    +   + + +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPAQNPQTFSHTVDKVIDLQPDRLSVFNYAHLPE-RFMPQRRIDAADLPDAASKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 QRTVEQLGNAGYRYIGMDHFALPDDELATAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           +V      +          + +++  +  A       + + +    ++  L     +   
Sbjct: 335 QVGE----LYSQNSSDLSEYSRLLDSDQPATKRGLLCNDDDRIRRAIIQQLICHFTLEFG 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I   +   +     G  ++ +V 
Sbjct: 391 EIEKNFCIDFRDYFRDAWPQLLGMASDGLITLSETG-IEVRPEGRLLVRAVC 441


>gi|326403753|ref|YP_004283835.1| oxygen-independent coproporphyrinogen III oxidase [Acidiphilium
           multivorum AIU301]
 gi|325050615|dbj|BAJ80953.1| oxygen-independent coproporphyrinogen III oxidase [Acidiphilium
           multivorum AIU301]
          Length = 444

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 82/392 (20%), Positives = 146/392 (37%), Gaps = 27/392 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C +C   +         E +  +  TE+  +    G R     I +GG
Sbjct: 48  SLYLHVPFCRTMCWFCGCTTSAVHSVGALERYAAALETEIGRVAAAIGHRLPAGQIHWGG 107

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    +  +   +A+++ +    EI IE +P ++  +     R   V R+SLGVQ
Sbjct: 108 GTPTALPAPLLRRVHAALARHFALDDTTEIAIEIDPRTLPDDATALLRDLAVTRVSLGVQ 167

Query: 139 SLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
                    +GR+ + ++   AA          ++FDL+Y LP QT+   E  +   L+ 
Sbjct: 168 DFAPAVQAAIGRHQSVAQTKAAADAARAAGIASVNFDLVYGLPFQTIDSLEATIGEVLAL 227

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D ++LY       T   +     +  LP              +  A G     + + +
Sbjct: 228 GPDRIALYGYAHVPWTR-KRQQVIAERALPDVAARFAQQQRAAELLVAAGYRRIGLDHFA 286

Query: 258 FL-GAESLH------NLNYWRYG-D----YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               A +          N+  Y  D     IG+G  A S +  G  + A+  +     +L
Sbjct: 287 RPEDAMARAAGTGALRRNFQGYTVDPSDLLIGLGASAISFLPQGYAQNAVGTQP----YL 342

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW----EMLAGRNLDIECERN 361
             +     A  +   L  E +    ++  L     + +  +       AG   +      
Sbjct: 343 AAIEAGALATAKGLALDDEDRLRGAIIERLMCDLEVDLAAFGADPARFAG---ECAALAP 399

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           L+  GF+ R + SR+  T+ G   L    A  
Sbjct: 400 LESDGFLHR-EGSRIIVTEAGRPFLRHAAAAF 430


>gi|254702440|ref|ZP_05164268.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|261753005|ref|ZP_05996714.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
 gi|261742758|gb|EEY30684.1| coproporphyrinogen III oxidase [Brucella suis bv. 3 str. 686]
          Length = 450

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 146/393 (37%), Gaps = 25/393 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C YC  ++ +        +++     E++ + +  G   ++  I FGG
Sbjct: 49  SLYLHIPFCRSMCWYCGCHTTITEKDRPILDYLDVLHKEIEMIARQRGRSFNLGEIHFGG 108

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++I+P     ++  +      +  +   +E +P  +          +G+ R SLGVQ
Sbjct: 109 GTPTIIQPDEFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQ 168

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  + + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+  
Sbjct: 169 SFDPKVQKAINRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEM 228

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +  +++     +G          +  LP                   G     + + +
Sbjct: 229 RPNRFAVFGYAHVQG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFA 287

Query: 258 FLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                      E   + N+  Y        IGIG  A  R   G H+  +     P  + 
Sbjct: 288 LPDDDLSIAQREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYA 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECER 360
             V        +   L++E +    ++  L     ++V       G + ++     +   
Sbjct: 344 SCVASGELPTAKIYELTAEDRVRANVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLD 403

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L++ G ++R +   +R   R   ++ +V +  
Sbjct: 404 ELEKDGLVQR-EGFMVRVDGRHRFIVRAVASAF 435


>gi|257484879|ref|ZP_05638920.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331011097|gb|EGH91153.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 460

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 149/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKALRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPRQTAQAFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDTAELPDARSKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S + +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLSDYQRLLDSDQPATRRGLMCSDDDRIRRAVIQQLICHFMLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +++ G I       +     G  ++ +V 
Sbjct: 391 EIEKAFSIDFRGYFSDAWPQLLGMEKDGLIALSAAG-IEVKPAGRLLVRAVC 441


>gi|126462724|ref|YP_001043838.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17029]
 gi|332558763|ref|ZP_08413085.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
 gi|126104388|gb|ABN77066.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17029]
 gi|332276475|gb|EGJ21790.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
          Length = 452

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 71/396 (17%), Positives = 146/396 (36%), Gaps = 31/396 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            + VYVH PFC + C +C   +   +     E ++ + L E++ ++Q L        + +
Sbjct: 50  PISVYVHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKQHLPAGVKAGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G
Sbjct: 110 GGGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q   +     +GR        A +   R      ++ DL+Y LP Q        + + L
Sbjct: 170 IQDFTDIVQNAIGREQPFENTKACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   D ++++        +  +     + VLP +    +L NL   + +  G     I +
Sbjct: 230 SLRPDRVAIFGYAHVP-WMAKRQKLIDETVLPPDIERHELANLAARLFTEGGFERIGIDH 288

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +                 N+  Y D      +GIG  + S+ + G  +   +      +
Sbjct: 289 FALPDDSMAVAARSGKLRRNFQGYTDDTCPTLLGIGASSISKFEQGYLQNTAAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           ++K + +          ++ E     +A E +M    L     +       G   +    
Sbjct: 345 YIKSIEEGRLPGYRGHRMTEEDYLHGRAIEMIMCDFFL----DLPALRARFGEPAETMVP 400

Query: 360 RNLQRQG----FIERVQFSRLRCTQRGMTMLDSVIA 391
           R  +       F+       +   + G  +   +  
Sbjct: 401 RIAEAAEKFTPFVTVDADGSMSIAKEGRALARMIAR 436


>gi|242309139|ref|ZP_04808294.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
 gi|239524180|gb|EEQ64046.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
          Length = 349

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 17/321 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y+H PFC  KC YC FNS   +  +  + ++Q    ++       G   I+S++ GGGTP
Sbjct: 2   YLHIPFCDSKCGYCAFNSKTNKNHLKHQ-YMQRLCDDLAEQLAFYGVSKITSVYIGGGTP 60

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           S++E      I + +     +  N E+ IEANP+S+ +   +  +  GVNR+SLGVQS  
Sbjct: 61  SVVESSKYQRIFEILYPF--LEGNAEVNIEANPNSLTLEWMKNLKSFGVNRLSLGVQSFF 118

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + LRFL R H       A+  A  +    +S DLIY  P       E E+Q A    ++
Sbjct: 119 AEKLRFLERIHREVSIYEAMENALKVGLENISIDLIYGTPFCAKEILEQEVQMASKLPIN 178

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S YQL+I++G+ F+   K           ++  +   +      G   YE+SN++  G
Sbjct: 179 HISAYQLSIDEGSRFFVQQKREFSGEFEGYPSMGHF--MKECLGQQGFVQYEVSNYAR-G 235

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
             S HNL YW   +Y+GIG GA   +          IE + +       K+G    ++E 
Sbjct: 236 YYSKHNLGYWEQKEYLGIGAGAVGCINGIRTYGVCEIEDYLKG------KSG----DREI 285

Query: 321 LSSEQQADEFLMMGLRLREGI 341
           L S+    E L +GLR   G+
Sbjct: 286 LKSKDIELEHLFLGLRSCVGV 306


>gi|148260558|ref|YP_001234685.1| oxygen-independent coproporphyrinogen III oxidase [Acidiphilium
           cryptum JF-5]
 gi|146402239|gb|ABQ30766.1| coproporphyrinogen III oxidase, anaerobic [Acidiphilium cryptum
           JF-5]
          Length = 444

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 82/391 (20%), Positives = 146/391 (37%), Gaps = 25/391 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGG 78
            +Y+H PFC   C +C   +         E +  +  TE+  +    G R     I +GG
Sbjct: 48  SLYLHVPFCRTMCWFCGCTTSAVHSVGALERYAAALETEIGRVAAAIGHRLPAGQIHWGG 107

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    +  +   +A+++ +    EI IE +P ++  +     R   V R+SLGVQ
Sbjct: 108 GTPTALPAPLLRRVHAALARHFALDDTTEIAIEIDPRTLPDDATALLRDLAVTRVSLGVQ 167

Query: 139 SLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
                    +GR+ + ++   AA          ++FDL+Y LP QT+   E  +   L+ 
Sbjct: 168 DFAPAVQAAIGRHQSVAQTKAAADAARAAGIASVNFDLVYGLPFQTIDSLEATIGEVLAL 227

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D ++LY       T   +     +  LP              +  A G     + + +
Sbjct: 228 GPDRIALYGYAHVPWTR-KRQQVIAERALPDVAARFAQQQRAAELLVAAGYRRIGLDHFA 286

Query: 258 FL-GAESLH------NLNYWRYG-D----YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               A +          N+  Y  D     IG+G  A S +  G  + A+  +     +L
Sbjct: 287 RPEDAMARAAGTGALRRNFQGYTVDPSDLLIGLGASAISFLPQGYAQNAVGTQP----YL 342

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---EMLAGRNLDIECERNL 362
             +     A  +   L  E +    ++  L     + +  +        R  + E    L
Sbjct: 343 AAIEAGALATAKGLALDDEDRLRGAIIERLMCDLEVDLAAFGADPARFAR--ECESLAPL 400

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +  GF+ R + SR+  T+ G   L    A  
Sbjct: 401 EADGFLHR-EGSRISITEAGRPFLRHAAAAF 430


>gi|213963740|ref|ZP_03391990.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sputigena Capno]
 gi|213953620|gb|EEB64952.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sputigena Capno]
          Length = 454

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 80/409 (19%), Positives = 153/409 (37%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   + +   S   + +Y+H PFC   C +C  +  + +    +  +I++ L E Q
Sbjct: 34  KWLESLSKSYSESNSTEGISLYIHLPFCESLCTFCGCHKRITKRHEMEIPYIEAVLKEWQ 93

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                   R  I  I  GGGTP+  +P  +  +++GI +      N E + E +P++   
Sbjct: 94  LYTDFLKERPRIKEIHLGGGTPTFFQPSQLRRLIEGIFERADRVENYEFSFEGHPNNTTE 153

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + Q     G  R+S GVQ    +  + + R             AR I    +S DL++ 
Sbjct: 154 AHLQTLYNLGFKRVSYGVQDYSPKVQKAIHRLQPFENVQRVTEQARTIGYTSVSHDLVFG 213

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+      + ++ +   D ++ Y                 D  LP+  V   LY +
Sbjct: 214 LPFQTLDDVLFTIDKSNTLRPDRIAFYSYAHVPWIKGSGQRGFKDEDLPTGEVKRQLYEV 273

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSR 285
            +      G     + + +   A+S++        + N+  Y        IG+G  + S 
Sbjct: 274 GKQHLLEAGYIEIGMDHFALP-ADSMYYAFKNKQLHRNFMGYTASKTQVMIGLGMSSISD 332

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  +     EK  + +   + KN   V +   L+ E       ++ L  +   S  D
Sbjct: 333 SWYGFAQN----EKDLDDYYARLEKNEIPVCKGHILNKEDLIIRRHILNLMCQFETSWSD 388

Query: 346 WEMLAGR-NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +     N  I   + +Q  G +  +  + +     G   + ++    
Sbjct: 389 EALQFPEINEVIMHLQEMQNDGLLH-IANNHIEVPDAGKPFIRNICMAF 436


>gi|124514260|gb|EAY55774.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum rubarum]
          Length = 389

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 98/381 (25%), Positives = 173/381 (45%), Gaps = 19/381 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YV  PFC ++C YC     ++  +     ++++   E + + +      + +++ GGGT
Sbjct: 14  LYVQVPFCPERCDYCSLPVSLKTERAP--AYLRALFREKKRLMEREDLSGLETLYVGGGT 71

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ + P  +  +L+G+ K   + +  E+T+E+ P +V  +     R  GV R+S G++S+
Sbjct: 72  PTFLPPALLEDLLEGLQK--DLPTLKEMTVESRPDTVTPDILHLLRSCGVTRLSFGIESV 129

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +RFLGR  N  E +  +   RN FP  +S D I      +   +  E     S  +
Sbjct: 130 RSEHMRFLGRTINVVEPVRFLKFVRNYFPGSVSMDFIAGGEGFSKDAFLQEAHALFSEGL 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF- 258
           DHLSLY LT+E+ T        G++   +E  A  L+       S  G   YE++N S  
Sbjct: 190 DHLSLYPLTVEERTSLKGRLIRGEISSGTEEAAGVLWEGVVRELSLMGWFRYEVANFSRS 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
                 HN   W+  DY GIG GAH R++        SI     S+   +   G    ++
Sbjct: 250 PDTVCRHNHLVWQGYDYAGIGAGAHQRIRSVRTINVRSIV----SYENRLSLLGPPFEKR 305

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDW--EMLA--GRNLDIECERNLQRQGFIERVQF- 373
           E L   ++  E L    RL  G  +     +     G  +D     +L  +G+++   + 
Sbjct: 306 EVLDQNERILEILYTNARLSNGFPLSWLFCQDRTNGGGGMD---LSDLVEEGYLDSGAYS 362

Query: 374 -SRLRCTQRGMTMLDSVIANL 393
             R+  T++G  +LD ++  +
Sbjct: 363 SDRVIFTEKGRDLLDGLMGEI 383


>gi|239993260|ref|ZP_04713784.1| coproporphyrinogen III oxidase [Alteromonas macleodii ATCC 27126]
          Length = 457

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 85/404 (21%), Positives = 152/404 (37%), Gaps = 25/404 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
             +    + ++ +YVH PFC   C YC  N  V R+    + ++     E+   R LT  
Sbjct: 43  QALAVSKAPAVSLYVHIPFCKTLCYYCGCNKMVTRHNEKADEYLDYIEKEILSKRYLTDG 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R   S+  GGG+PS +       ++  + K++T  +  E++IE +P +++ +  Q  +  
Sbjct: 103 RRAVSLHLGGGSPSFLSETQHTYLMYLLKKHFTFEAGAELSIELDPRNIDKHYLQNLKCL 162

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  RIS G+Q  +    + + R  + S     +  AR+  F  ++ DLIY LP Q++  +
Sbjct: 163 GYTRISFGLQDTDYNVQKTINRIQSTSHIADLVFEARSLGFDSVNLDLIYGLPNQSIETF 222

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +    +   D +SL+         F    K  +  LPS      LY L  +  +  G
Sbjct: 223 SSTIAATKAMMPDRISLFSYAHLPE-RFAAQRKFAEETLPSSEEKAALYKLAVNSFTNIG 281

Query: 248 LH-----AYEISNHSFLGAESLHNL--NYWRY-----GDYIGIGPGAHSRVKVGSHRVAI 295
                   + +S  S   A++   L  N+  Y      D IG G  A S V     + A 
Sbjct: 282 YEMIGLDHFALSKDSLAIAKNKGELHRNFQGYTLRGDTDLIGFGVSAISTVGNAFAQNA- 340

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              K  + +   +  +         LS +      ++  L     +  +          D
Sbjct: 341 ---KELKEYYSRLDNHLPNAKVGLSLSVDDLIRRDVISSLMCNLAVDKQAIADKHHIIFD 397

Query: 356 IEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       L+  G IE      +R  +     + ++ A  
Sbjct: 398 EYFASALNNLEELKEDGLIETTS-RYIRVPESARIYIRAICARF 440


>gi|330986524|gb|EGH84627.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 460

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 149/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKALRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPRQTAQAFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDTAELPDARSKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S + +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLSDYQRLLDSDQPATRRGLMCSDDDRIRRAVIQQLICHFMLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +++ G I       +     G  ++ +V 
Sbjct: 391 EIEKAFSIDFRGYFSDAWPQLLGMEKDGLIALSAAG-IEVKPAGRLLVRAVC 441


>gi|71738016|ref|YP_275507.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558569|gb|AAZ37780.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320325148|gb|EFW81217.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329407|gb|EFW85400.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330880612|gb|EGH14761.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 460

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 149/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKALRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPRQTAQAFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDTAELPDARSKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S + +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLSDYQRLLDSDQPATRRGLMCSDDDRIRRAVIQQLICHFMLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +++ G I       +     G  ++ +V 
Sbjct: 391 EIEKAFSIDFRGYFSDAWPQLLGMEKDGLIALSAAG-IEVKPAGRLLVRAVC 441


>gi|256820783|ref|YP_003142062.1| coproporphyrinogen III oxidase [Capnocytophaga ochracea DSM 7271]
 gi|256582366|gb|ACU93501.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           ochracea DSM 7271]
          Length = 454

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/408 (19%), Positives = 151/408 (37%), Gaps = 21/408 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K+L +   +     S   + +Y+H PFC   C +C  +  + +    +  +I++ L E Q
Sbjct: 34  KWLESLRKSYAESNSTEGISLYIHLPFCESLCTFCGCHKRITKRHEMEAPYIEAILKEWQ 93

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                   R  I  I  GGGTP+  EP  +  +++GI +    +   E + E +P++   
Sbjct: 94  LYTDFLKERPRIKEIHLGGGTPTFFEPLQLRRLIEGIFERADKADAHEFSFEGHPNNTTE 153

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + Q     G  R+S GVQ    +  + + R             AR I    +S DL++ 
Sbjct: 154 THLQTLYDLGFRRVSYGVQDYSPKIQKAIHRIQPFENVKRVTQQARAIGYTSVSHDLVFG 213

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT+      + R+ +   D ++ Y                 D  +P+  V  +LY +
Sbjct: 214 LPFQTLDDVLFTIDRSNTLRPDRIAFYSYAHVPWIKGSGQRGFKDEDVPTGEVKRELYEV 273

Query: 239 TQSITSAHGLHAYEISNHSFL-----GAESLH--NLNYWRYGD-----YIGIGPGAHSRV 286
            +      G     + + +        A   H  + N+  Y        IG+G  + S  
Sbjct: 274 GKQYLLKAGYAEIGMDHFALPTDSMYKAFKNHQLHRNFMGYTASKTQVMIGLGMSSISDS 333

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +     EK  +++   + KN   V +   L+ E       ++ L  +   S  D 
Sbjct: 334 WYGFAQN----EKDLDAYYARLEKNEIPVCKGHILNREDLIIRRHILNLMCQFTTSWNDE 389

Query: 347 EMLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +      ++    + +Q  G +  +  + +     G   + ++    
Sbjct: 390 SLQFPEITEVITHLQEMQNDGLLH-IAGNHIEVPDEGKPFIRNICMAF 436


>gi|260060768|ref|YP_003193848.1| coproporphyrinogen III oxidase [Robiginitalea biformata HTCC2501]
 gi|88784898|gb|EAR16067.1| coproporphyrinogen III oxidase [Robiginitalea biformata HTCC2501]
          Length = 452

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 153/399 (38%), Gaps = 31/399 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SS 73
            ++ + VY+H PFC   C +C     + +    ++ +I++ L E +  R++ G R +  +
Sbjct: 47  AASGISVYIHLPFCESLCTFCGCLKRITKRHSVEDPYIRAVLKEWKLYREIFGKRPVIRT 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+   P+N+ L++ GI +    + + E + E +PS+    + Q     G  R+
Sbjct: 107 LHLGGGTPTFFSPENLQLLVRGILRFADRAPDWEFSFEGHPSNTTREHLQVLYDLGFRRV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ         + R  +  E      L+R I    +  D+IY LP+QT       L 
Sbjct: 167 SYGVQDYNPGVQEAINRKQSFEEVAEITRLSREIGYTSVGHDIIYGLPRQTADHVRDTLG 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L    D ++ Y                 D  LP     +  + L + I    G  A  
Sbjct: 227 KTLDIRPDRIAFYSYAHVPWMKGNGQRGFRDSDLPGAAGKLRQFALGEEILGKGGYAAVG 286

Query: 253 ISNHS-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           + +++               + N+  Y +      IG+G  + S       +   S+   
Sbjct: 287 MDHYALESDVLYRAMRSGQLHRNFMGYTETATQLTIGLGVSSISDSWDAFAQNVKSV--- 343

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE------GISVKDWEMLAGRNL 354
            E +  +V      ++    L+   +     ++ L  R       G+     E + GR +
Sbjct: 344 -EEYQHLVDCGVLPLMRGHQLTLADRQVRRHILNLMCRNETQWNLGLPADVREAVVGRLV 402

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             E        G +E +    +R TQRG   + ++    
Sbjct: 403 QPEA------DGLVELLPGG-IRITQRGRRFMRNICMAF 434


>gi|163734083|ref|ZP_02141524.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
 gi|161392619|gb|EDQ16947.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
          Length = 449

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 73/400 (18%), Positives = 146/400 (36%), Gaps = 31/400 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++LSA            + +Y+H P+C + C YC  N  + +       + Q+   E+  
Sbjct: 36  RWLSAL------PPEKPVSLYLHVPYCRELCWYCGCNMKLAKKDAPVAQYAQTLNREISL 89

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + Q    R  IS + +GGGTP+ + P ++   +D +  ++  +++ E+ IE++P ++   
Sbjct: 90  LAQHLPERMKISHLHWGGGTPTALVPDDLERAMDAVHASFDFTADAELAIESDPRTLTDE 149

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
                 + G  R S GVQ  + +  + + R         ++   R      ++FDLIY L
Sbjct: 150 MILRIGQLGFTRASFGVQEFDPKVQKAINRIQPPDMVRHSVDGLRAAGVSGINFDLIYGL 209

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+      ++  +    D ++L+        +  K     +  LP  +  +      
Sbjct: 210 PHQTVDTLLETIRLCVEMQPDRIALFGYAHVP-WMAKKQRLIDEAALPDGDARLQQSQAA 268

Query: 240 QSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G  A  + + +           E     N+  Y        +G+G  +  R  
Sbjct: 269 AVALVEAGYVAIGLDHFALPSDPMAKAAKEGSLRRNFQGYTTDRAETMLGVGSTSIGRTP 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +          +W + +      V +   LS +      ++  L     + +    
Sbjct: 329 SGYVQNLTET----GAWARAIEAGVLPVAKGVGLSKDDNLRGHVIERLMCNGEVDLDAAA 384

Query: 348 MLAGRN-----LDIECERNLQRQGFIERVQFSRLRCTQRG 382
           + AG       +       L+  G I R Q  ++  T  G
Sbjct: 385 LQAGAPGGWYHMHDAELAILEADGLITR-QGGKISVTDHG 423


>gi|332975977|gb|EGK12850.1| oxygen-independent coproporphyrinogen III oxidase [Psychrobacter
           sp. 1501(2011)]
          Length = 522

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 73/422 (17%), Positives = 152/422 (36%), Gaps = 46/422 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----- 66
               +  L +Y H PFC   C YC  N  + +      ++++    E++  R L      
Sbjct: 83  RRDPNTPLSLYFHIPFCRHLCYYCGCNKIITKKNSDAGDYLEYLKREVKQKRALLERPAS 142

Query: 67  -GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN------------VEITIEAN 113
            G   +  +  GGGTP+    + +  + + +   +  +               + +IE +
Sbjct: 143 GGKPYVKQLHLGGGTPTFFSDEELTELWEFLQTQFEFAPTSQDKTTDEHPEVGDYSIEID 202

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMS 172
           P  +     +  R  G NR+S GVQ L+      + R  +     + +    R  F   +
Sbjct: 203 PREIRDTTLEVLRNLGFNRVSFGVQDLDHNVQIAVNRVQSEELIQSVMEETRRLGFKSTN 262

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLIY LP QT   +   ++R +  + D LS++       + F    +  +  LP+    
Sbjct: 263 IDLIYGLPHQTPQTFAKTVERIIDISPDRLSIFNYAHLP-SRFKSQRQIKEEDLPTPAEK 321

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGP 280
           +++++ T +  +  G     I + +           E + + N+  Y      D +G G 
Sbjct: 322 LEMFSNTIAALNEAGYQYIGIDHFAKPEDSMAVAQREGILHRNFQGYTILGDCDLLGFGV 381

Query: 281 GAHSRVKVGSHRVAIS-------IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
            + S++    +    +            + +  MV       V+    + + +   +++M
Sbjct: 382 SSISQINSTLYANKGNSSTHILQNHTDLKEYETMVDLGKLPAVKHIKTTIQDRLRGYIIM 441

Query: 334 GLRLREGISVKDWEMLAGRNLDIECERNLQRQG------FIERVQFSRLRCTQRGMTMLD 387
            L   + I  KD       +        +Q+ G       I+      +R   +G  +  
Sbjct: 442 NLLCHDYIDFKDLNQKFSIDAITYFIDEIQQLGEMQQDKLIDMDAAG-IRILPKGRLLAR 500

Query: 388 SV 389
           +V
Sbjct: 501 NV 502


>gi|170722745|ref|YP_001750433.1| coproporphyrinogen III oxidase [Pseudomonas putida W619]
 gi|169760748|gb|ACA74064.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           putida W619]
          Length = 460

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/412 (19%), Positives = 154/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L VYVH PFC   C YC  N  + + +     ++Q    E+Q
Sbjct: 38  FDLLHALRES--RRAVRPLSVYVHVPFCANICYYCACNKVITKDRARAAPYLQRLEQEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  + +++ +    + +  IE +P   
Sbjct: 96  LIACHLDPKQRVEQLHLGGGTPTFLSHVELRQLMATLRQHFNLLDDDSGDYGIELDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  +    I  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPAVQRAINRLQSLEQTRTLIEAARTLQFRSVNLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   ++  +    D LS++         F    +     LP+    +++ 
Sbjct: 216 YGLPKQTPEGFARTVEEVIRLQPDRLSVFNYAHLPE-RFMPQRRIDSNDLPAPAAKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T    +  G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 RATIEQLTTAGYRYIGMDHFALPDDELAVAQEEGTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +         ++   +  +  A       + + +    ++  L     +  +
Sbjct: 335 QIGD----LYCQNSSDLNTYQDALSGSQLATQRGLLCNHDDRLRRAVIQQLICHFELDFE 390

Query: 345 DWEMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +             N+QR G I   +   +R    G  ++ SV 
Sbjct: 391 PIESAFTIDFRGYFNDLWPALLNMQRDGLIHLDEKG-IRILPAGRLLVRSVC 441


>gi|221639745|ref|YP_002526007.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides KD131]
 gi|221160526|gb|ACM01506.1| Coproporphyrinogen III oxidase, anaerobic 1 [Rhodobacter
           sphaeroides KD131]
          Length = 452

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 147/396 (37%), Gaps = 31/396 (7%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            + VYVH PFC + C +C   +   +     E ++ + L E++ ++Q L        + +
Sbjct: 50  PISVYVHVPFCERLCWFCACRTQGTQTLAPVEAYVGTLLQELELVKQHLPAGVKAGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P+ I  +   I      + + E ++E +P  V+    +   + G+NR S+G
Sbjct: 110 GGGTPTILSPELIHKLAQAIKAVIPFAEDYEFSVEIDPMMVDEPKIRALSEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q   +     +GR        A +   R      ++ DL+Y LP Q        + + L
Sbjct: 170 IQDFTDIVQNAIGREQPFENTKACVETLRRYGVHSLNTDLVYGLPHQNRESLAATIDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S A D ++++        +  +     + VLP +    +L NL   + +  G     I +
Sbjct: 230 SLAPDRVAIFGYAHVP-WMAKRQKLIDETVLPPDIERHELANLAARLFTEGGFERIGIDH 288

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +                 N+  Y D      +GIG  + S+ + G  +   +      +
Sbjct: 289 FALPDDSMAVAARSGKLRRNFQGYTDDTCPTLLGIGASSISKFEQGYLQNTAAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           ++K + +          ++ E     +A E +M    L     +       G   +    
Sbjct: 345 YIKAIEEGRLPGYRGHRMTEEDYLHGRAIEMIMCDFFL----DLPALRARFGEAAETMVP 400

Query: 360 RNLQRQG----FIERVQFSRLRCTQRGMTMLDSVIA 391
           R  +       F+       +   + G  +   +  
Sbjct: 401 RIAEAAEKFTPFVTVDADGAMSIAKEGRALARMIAR 436


>gi|317010885|gb|ADU84632.1| coproporphyrinogen III oxidase [Helicobacter pylori SouthAfrica7]
          Length = 457

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 136/374 (36%), Gaps = 20/374 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-Q 64
           A+ ++   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++  
Sbjct: 40  AFFSHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKNA 99

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQ 123
           +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + Q
Sbjct: 100 MDTNREVAQFHYGGGTPTFFSPAQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHMQ 159

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
                G NR+S GVQ  + +  + + R         A+ LAR+     ++FDLIY LP Q
Sbjct: 160 TLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQDAVKLARDYGIKSINFDLIYGLPNQ 219

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L+  L    D L+++        +   M K  + +LPS    +++     S 
Sbjct: 220 TKESFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPKDKLEILEALISF 278

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
                     + + +    E       +    N+  Y        IGIG  +        
Sbjct: 279 LEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----EG 334

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                   K    + K +      V     L+ E    + ++M +     +     E   
Sbjct: 335 GDYYTQNYKDLNQYEKALDLGHLPVERGVALTKEDVLRKEVIMQMMSNLKLDYSKIEEKF 394

Query: 351 GRNLDIECERNLQR 364
             +     ++ L++
Sbjct: 395 SIDFKAHFKKELEK 408


>gi|330889027|gb|EGH21688.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 460

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 147/412 (35%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKALRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRRLMAQLRAHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPRQTAQAFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDTAELPDARSKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S + +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLSDYQRLLDSDQPATRRGLMCSDDDRIRRAVIQQLICHFMLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I       +     G  ++ +V 
Sbjct: 391 EIEKAFSIDFRDYFSDAWPQLLGMAEDGLIALSAAG-IEVKPAGRLLVRAVC 441


>gi|168700714|ref|ZP_02732991.1| coproporphyrinogen III oxidase [Gemmata obscuriglobus UQM 2246]
          Length = 456

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 85/415 (20%), Positives = 168/415 (40%), Gaps = 36/415 (8%)

Query: 3   YLSAYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           YL   E  +         LG+Y+H PFC K+C +C F  +  +       ++ +   E++
Sbjct: 31  YLPDAERAVNSPPRPGVPLGLYLHIPFCRKRCKFCYFRVYTDKNASDISVYLNAITKEVE 90

Query: 61  WMRQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
            + +    G R +  ++FGGGTPS +    +  ++  +       S  E+T E  P +++
Sbjct: 91  LLSKTGCVGGRPLDYVYFGGGTPSYLSASQLDGLMSRLRAIMPWDSAREVTFECEPGTLQ 150

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
            +  +  R  G+ R+SLGV++ + + L++ GR H+  E   A   AR   FP+++ DLI 
Sbjct: 151 KHKLETLRTHGITRLSLGVENFKPEILQYNGRAHSEDEIYRAFGWARELGFPQINIDLIA 210

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--------MHKDGDLVLPSE 229
            +  +    W+  + + L    D +++YQ+ +   T F K             DL+ P+E
Sbjct: 211 GMVGEDWDNWKRCVAKLLELQPDCVTIYQMELPYNTEFSKALRVKDGAARTSLDLIQPAE 270

Query: 230 NVAVDLYNLTQSITSAHGLHA---------YEISN-----HSFLGAESLHNLNYWRYGDY 275
                  N+    T                YE+S+      S    + ++    WR  D 
Sbjct: 271 GTVSPAGNVADWPTKRAWTKYAFDELVKNGYEVSSATTVVKSKANTKFVYREALWRGADM 330

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
            G G  +   V     +   +     E+++  +      +      +   +    +++ L
Sbjct: 331 FGTGVASFGHVNGVHMQNLDTW----EAYVGKLEAGELPLGRAFPTTERDRLIREVVLLL 386

Query: 336 RLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLD 387
           +    + V  +    G ++  E    L    R+G+++      + CT  G+  +D
Sbjct: 387 KTGH-LDVDYFRGKYGVDIRTEFREPLAKLDREGWLKVTGEG-VDCTPEGLIQID 439


>gi|31621274|gb|AAP59032.1| HemN [Thiocapsa roseopersicina]
          Length = 453

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 146/399 (36%), Gaps = 29/399 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PR 69
           +       + VYVH PFC  +C YC  N+ +   +   + ++ +   EM  +  + G  R
Sbjct: 49  LRNSPDEHVSVYVHVPFCHVRCLYCACNTTITHSEEKVDQYLDTLDREMGLVADIIGRGR 108

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
               +  GGGTP+ +    +A +++ + + + +S     +IE NP              G
Sbjct: 109 VTDQLHVGGGTPNHLNEPQLARLMEIVERYFRISDRACTSIECNPRRTSAGQLDLLYGLG 168

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
             RIS GVQ L     R +GR  +          AR+  F  ++ DLIY LP QT   ++
Sbjct: 169 FKRISFGVQDLNSDVQRAIGRVQSLDMVRDVFLTARDTGFESINLDLIYGLPFQTPEGFQ 228

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L + ++   D ++ +    +  +  ++     D  LPS    + L++      SA G 
Sbjct: 229 QTLDQIVALGPDRVACFSYAHDPVSRPHQHAISAD-HLPSVAEKLALFHQAVECFSAAGY 287

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYGDY-----IGIGPGAHSRVKVGSHRVAIS 296
               +   +           E     N   Y        +  GP     V     + A  
Sbjct: 288 RWVGLDVFAREADELTSAQDERRLYRNAIGYTPMPAKQVLAFGPSGIGEVGGALVQNAP- 346

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
                ++W + V      V     LS + +     ++ L     +        +   L+ 
Sbjct: 347 ---DLKTWQRCVSSGLLPVSWGRRLSDQDRRRREAILYLMCNLELPAS-----SAHGLER 398

Query: 357 ECERNLQRQ---GFIERVQFSRLRCTQRGMTMLDSVIAN 392
           E E +L R    G +E      +R T+ G  +L  +   
Sbjct: 399 EYE-SLCRDGGRGLLEVTDDG-IRVTEEGRYLLHGLCVE 435


>gi|38014131|gb|AAH05854.4| RSAD1 protein [Homo sapiens]
          Length = 387

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 206/365 (56%), Gaps = 19/365 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGGTPSL  P  +A +L+
Sbjct: 1   CNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGGTPSLASPHTVAAVLE 59

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
            +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+QSL++  LR LGR H+A
Sbjct: 60  AVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQSLDDTELRLLGRTHSA 119

Query: 155 SEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +A+  +  AR +FP R+S DL+  LP Q +  W  +LQ  L +  DHLSLYQL++E+GT
Sbjct: 120 CDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLGQLQELLHHCDDHLSLYQLSLERGT 179

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
             +   + G L  P   +A ++Y   +++    G H YE+SN +  GA S HN  YW+ G
Sbjct: 180 ALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFHQYEVSNFARNGALSTHNWTYWQCG 239

Query: 274 DYIGIGPGAHSRVK----VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
            Y+G+GPGAH R       G  R A      P++W+K V   GH   ++  L   +  +E
Sbjct: 240 QYLGVGPGAHGRFMPQGAGGHTREARIQTLEPDNWMKEVMLFGHGTRKRVPLGRLELLEE 299

Query: 330 FLMMGLRLREGISVKDWEML---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
            L +GLR   GI+ + W+            G N +++    L  +G + ++    LRC+ 
Sbjct: 300 VLALGLRTDVGITHQHWQQFEPQLTLWDVFGANKEVQ---ELLERGLL-QLDHRGLRCSW 355

Query: 381 RGMTM 385
            G+ +
Sbjct: 356 EGLAV 360


>gi|163743763|ref|ZP_02151136.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
 gi|161382912|gb|EDQ07308.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis 2.10]
          Length = 451

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 150/400 (37%), Gaps = 24/400 (6%)

Query: 5   SAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +A++     T   +  + VY+H PFC + C +C   +   +     E++I +   E+  +
Sbjct: 35  AAFQKAQLTTLDPAAPVSVYIHIPFCERLCWFCACRTQGTQTLSPVESYIGTVEKELSLL 94

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L     +  + +GGGTP+++ P  I  +   I      +++ E ++E +P+ V+   
Sbjct: 95  ADILPEGLRMGRLHWGGGTPTILPPALIHRLAQSIKSAVPPTTDWEFSVEIDPTMVDREK 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALP 180
                K G+NR S+G+Q  + +    +GR        A +  L       ++ DL+Y LP
Sbjct: 155 IAALAKEGMNRASIGIQDFDPEVQTAIGRIQPFDVTAACVADLRAAGIHSLNTDLVYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q   +    + + L+ A D ++L+        +  +     D  LP +     L  L  
Sbjct: 215 HQDAARIAETVDKVLTLAPDRVALFGYAHVP-WVAKRQKLIDDTTLPGDETRYHLAELAA 273

Query: 241 SITSAHGLHAYEISNHSFL------GAESLH-NLNYWRYGD-----YIGIGPGAHSRVKV 288
               + G     I + +           S H   N+  Y D      IG+G  + SR   
Sbjct: 274 QKFQSAGFANIGIDHFARPQDGLNLARNSGHLRRNFQGYTDDHCPTLIGVGASSISRFDG 333

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G  + A +      ++++ +     A      L+   +     +  L     +   + + 
Sbjct: 334 GYVQNAAAT----AAYIQRIEAGDLAGTRGHQLTLIDKMRARAIEMLMCDFRLDRTELQH 389

Query: 349 LAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
             G   + L  + +  +   G +  +    L     G  +
Sbjct: 390 RFGSQTQQLTADLKAVMTTYGDLVTLTDEALVIEAEGRAL 429


>gi|282898691|ref|ZP_06306679.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Cylindrospermopsis raciborskii CS-505]
 gi|281196559|gb|EFA71468.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Cylindrospermopsis raciborskii CS-505]
          Length = 460

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/408 (18%), Positives = 154/408 (37%), Gaps = 38/408 (9%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRS 70
           +      L +Y H PFC   C +C  N+ +   K   E ++ +   E++   +L    R 
Sbjct: 50  SNHRHTPLSLYFHIPFCETPCYFCGCNTVISHNKKIAEPYVNNLAQEIKNTSRLIDTSRP 109

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  I +GGGTP+ +E + +  + + I + ++V +N E++IE NP  +  +     R  G 
Sbjct: 110 VLQIHWGGGTPNYLEIRQVEFLWETINRYFSVDANAEVSIEINPRYINRDYINSLRSIGF 169

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NRIS G+Q  + Q    + R         A+   +   F  ++ DLIY LP Q +  ++ 
Sbjct: 170 NRISFGIQDFDPQVQLAVNRIQPEKMLFDAMDWIKQSNFSSVNVDLIYGLPYQNLQGFQE 229

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L + ++   D + ++        +     K     LP+    +D+  +T    ++H   
Sbjct: 230 TLTKTIALDPDRIVVFNFAYVP-WMKPVQKKIDPTTLPTAQEKLDIMKMTIEQLTSHQYL 288

Query: 250 AYEISNHSFLGAESLHN-------------LNYWRY-----GDYIGIGPGAHSRVKVGSH 291
              + + +       HN              N+  Y      +  G G  A S +     
Sbjct: 289 FIGMDHFAK------HNDELAIAQVNGTLKRNFQGYTTHAETELFGFGITAISMLDNAYS 342

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
           +      K  + + + V      + +   L+ +      ++M +     +   + E    
Sbjct: 343 QNY----KDLKHYYQSVEMGAVPISKGIQLTPDDMIRRDVIMSIMSHFCLRKLEIEAKYH 398

Query: 352 RNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            N D            L+R G +       ++ T  G  ++ ++  + 
Sbjct: 399 INFDQYFHEELLELGRLERDGLVNLFADE-IQVTDIGRLLVRNIACHF 445


>gi|317491959|ref|ZP_07950393.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920080|gb|EFV41405.1| radical SAM superfamily protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 442

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 161/380 (42%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +    +   E +    + E++      L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCKFCGFYQNKLETEA-TEQYCDYLVREIEIEASSPLHQSAPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    +  I+  + +   ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPTALSASQLHRIISTLKRLLPLAPDCEITVEGRILNFDDERVDACLEAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR     EA+  +  LA      +  DL++ LP+QTM  W+ +L      
Sbjct: 175 TFNTRIRQRMGRRAAGEEAVVFMRQLAERDRAAVVCDLMFGLPEQTMQDWQNDLDIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y   ++  +  G      S+ +
Sbjct: 235 PLDGVDLYALNLLPSTPLGKAVENKRVTLPDVTQRRDFYLTGEAFLADEGWRQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G  A   +   S+     +E+  E + + + +    ++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAFGSCAGGNIDGQSYV----MERSLERYYQKLDEGRKPIM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEML---AGRNLDIECERNLQRQGFIERVQF 373
                S  +Q        L L+ GI V  +++       +  +   +  Q+ G + +V  
Sbjct: 351 --MMTSRSEQHR----WRLALQGGIEVGHFDLKRVLPDPSPLLPLLQQWQKCGLM-QVNG 403

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           +R R T  G     +++  L
Sbjct: 404 TRFRLTPAGRFWASNLMQAL 423


>gi|148559856|ref|YP_001258639.1| coproporphyrinogen III oxidase [Brucella ovis ATCC 25840]
 gi|148371113|gb|ABQ61092.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ovis
           ATCC 25840]
          Length = 444

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 85/393 (21%), Positives = 151/393 (38%), Gaps = 20/393 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++       +L  I   +    ++E  IE +P +V     +   + GVNR 
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTVTPLLAKTLAEMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +    +GR         A  L R +   R++FDLIY LP Q +       +
Sbjct: 163 SLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQMVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R ++ + D ++ Y                 +  LP  +       +        G     
Sbjct: 223 RVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGFGYQPVG 281

Query: 253 ISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           E   N N+  Y     G  IG GP + S+   G  +    +   
Sbjct: 282 IDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNISDV--- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K V     A V    L    +    ++  L     + +         + +    R
Sbjct: 339 -GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSDEFALLR 397

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L   G +  V+   +R T+ G +++  V A  
Sbjct: 398 PLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 429


>gi|315452811|ref|YP_004073081.1| oxygen-independent coproporhyrinogen III oxidase; HemN
           [Helicobacter felis ATCC 49179]
 gi|315131863|emb|CBY82491.1| oxygen-independent coproporhyrinogen III oxidase; HemN
           [Helicobacter felis ATCC 49179]
          Length = 351

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 166/375 (44%), Gaps = 35/375 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +S  +Y+H PFC  KC YC FNS     +  Q  ++ +   +M+   Q      I SIF
Sbjct: 5   KSSKSLYIHIPFCKSKCGYCAFNSF-SGLEDLQNVYVNALCKDMETSLQ---GERIVSIF 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP++++ ++   I + IA++ +V SN EIT+EANP  V +      +  G+ R+S+
Sbjct: 61  IGGGTPNILKIKHYDQIFNVIARHASVPSNTEITLEANPDLVSLEWCLALKNLGMTRLSI 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS  E  L FL R+H       A+  A+      +S DLIY  P  T    E E+  A
Sbjct: 121 GVQSFFESKLCFLQRDHMPKNVYKALEYAQKSAIEHISIDLIYNTPLDTAQNLEKEVALA 180

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               +DHLS Y LT+E  T   K        LP  ++      + ++   A G   YE+S
Sbjct: 181 SGLPIDHLSAYSLTLEDNTRLAK---IAPKNLPELDM------VMRASLEAQGFKHYEVS 231

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           N++       HNL+YW   +YIG G GA  RV    +     ++ +    L         
Sbjct: 232 NYAR-NYRVKHNLHYWNSLEYIGCGAGAVGRVGQTRYHKLKDVQSYIADPLHR------- 283

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS 374
               E L+ +    E + +GLR   G+ +   +    + L  E          I   +  
Sbjct: 284 --RTENLTDQDLYFEAIFLGLRCDLGVPIHLLKPKKVKTLLDER---------ICEQKGD 332

Query: 375 RLRCTQRGMTMLDSV 389
           RL        + D +
Sbjct: 333 RLIARD--FFLADEI 345


>gi|119433794|gb|ABL74954.1| Tlm Orf11 [Streptoalloteichus hindustanus]
          Length = 424

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/401 (23%), Positives = 166/401 (41%), Gaps = 31/401 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-----HVRRYKVGQENFIQSFL 56
           + L+A    +    +  L VYVH PFC  KC +CD+ +      +R    G+ +++ +  
Sbjct: 9   QLLTAISEVVRNHPNKKLAVYVHIPFCSSKCHFCDWVTDIPVRRLRSGPEGRASYVDALC 68

Query: 57  TEMQWMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
            ++++              +++GGGTP+ + P+ +  I   +  ++  S  V+ T+E  P
Sbjct: 69  DQIRFYGPQLTRFGYRPKVMYWGGGTPTRLAPEEMRAIRAALDDSFDFSDLVQWTVETTP 128

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSF 173
           + ++       R+ GV+R+S+GVQSL    LR  GR H+  +A+AA  L R       + 
Sbjct: 129 NDLDAEKLAAMREIGVDRVSVGVQSLNPYQLRKAGRAHSREQALAAFPLLRQAGITNFNV 188

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLI + P +    +   ++  L+    H+S+Y       T+         L    ++  V
Sbjct: 189 DLISSFPGEDQESFRRTVEDILALDPPHVSVYPYRATPKTVMAMQLDREFLEAHQQHDMV 248

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLH-----NLNYWRYGDYIGIGPGAHSRVKV 288
             Y +   +    G H Y    H +   ++ H     N  Y   GD IG G GA S +  
Sbjct: 249 ATYEMAMEMLGQAGYHEY---CHGYWVRDAAHEDHDGNFKYDLEGDKIGFGSGAESII-- 303

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G H +     K+ E +L   R    ++  +  L   ++    +   L  REG+    +  
Sbjct: 304 GHHLLWSENTKY-EEYLDDPRT--FSMAHRFTLDDPERLTAPVGGALMTREGVDFARFHR 360

Query: 349 LAGRNLDIECERN--------LQRQG--FIERVQFSRLRCT 379
           L G +                L+  G  F+E     R+  T
Sbjct: 361 LTGVSFADLRATPYFTRWFQVLEECGARFLESDTNFRMDPT 401


>gi|289627938|ref|ZP_06460892.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647332|ref|ZP_06478675.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330866480|gb|EGH01189.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 460

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 147/412 (35%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A   +   +    L +YVH PFC   C YC  N  + +     + ++Q    E+Q
Sbjct: 38  FDLLHALRES--RKALRPLSLYVHLPFCANICYYCACNKVITKDHGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +  ++  +  ++ +    + E  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRQLMAQLRAHFNLLEDDSGEYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPRQTAQAFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDTTELPDARSKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S++ +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLSDYQRLLDSDQPATRRGLMCSNDDRIRRAVIQQLICHFMLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I       +     G  ++ +V 
Sbjct: 391 EIEKAFSIDFRDYFSDAWPQLLGMAEDGLIALSAAG-IEVKPSGRLLVRAVC 441


>gi|297190490|ref|ZP_06907888.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197717797|gb|EDY61705.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 415

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 97/389 (24%), Positives = 164/389 (42%), Gaps = 16/389 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISS 73
            +  G YVH PFC   C YC F S  R        ++++  TE++               
Sbjct: 4   PSPAGYYVHIPFCTAICDYCGF-SVQRSKGAHIARYMEALSTEIRRYADAGRLNGHRFVC 62

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
             FGGGTPS I+ +++  I   I     VSS+ E+TIE NP S   +  + Y K G+NRI
Sbjct: 63  GHFGGGTPSAIDAEDLISIKRLIDSCCDVSSDAEVTIEVNPISFTSDKAETYAKGGINRI 122

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS ++Q LR +GR H A +   AI +     F   S D+IY +P QT+     +L 
Sbjct: 123 SIGVQSFDDQVLRTIGRPHRAGDVEDAIEVVHQAGFDNFSLDVIYGVPGQTVDCLREDLT 182

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAY 251
           RA +    HLS ++L I   T        G L    +   ++   ++ + +    G   Y
Sbjct: 183 RAAATGASHLSCFRLEIIPFTALKLREGAGLLPSRLDESQLNEMDDVVREVLLGLGYEEY 242

Query: 252 EISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
              N +  G  S+HN         DY+G G  ++S +    +     +     ++ K + 
Sbjct: 243 GAFNFAKHGYRSVHNRVAFVAPQCDYVGFGVSSYSFMNGHIYCNHADLL----NYEKEIF 298

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQG 366
                +      +S +    + ++G++ +  +    +    G   +    R    L   G
Sbjct: 299 AGRDPIALAHQATSMELMSRYFVLGVKFQR-VPRAGFIERFGVEPEEIFGRVFDELSDLG 357

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            ++      +  T +G   +++V  +  V
Sbjct: 358 VLKLDGDDYV-VTGKGRRYINNVCKSFYV 385


>gi|254503073|ref|ZP_05115224.1| oxygen-independent coproporphyrinogen III oxidase [Labrenzia
           alexandrii DFL-11]
 gi|222439144|gb|EEE45823.1| oxygen-independent coproporphyrinogen III oxidase [Labrenzia
           alexandrii DFL-11]
          Length = 474

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 143/393 (36%), Gaps = 28/393 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSI 74
            ++L +Y+H P+C + C YC  ++   R     + +  +   E++     L     +  I
Sbjct: 60  QDTLSLYLHVPYCREICHYCGCHTKATRKDAPLKAYADTMCRELELTAAHLQKAGPVKHI 119

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTPSL+  Q++  +   +   +    ++E  IE +P  V         + G+NR S
Sbjct: 120 HWGGGTPSLLPRQSLVELTGLMRVLFDFDPDLEHAIELDPRLVTQELADTLVQVGINRAS 179

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +    + +GR              R      ++FDL+Y LP Q+       +++
Sbjct: 180 LGVQDFDPDVQKAIGRVQPYEVVEQTTGYLRKAGLDALNFDLMYGLPGQSEESILDTVEK 239

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L      ++L+        +        +  LPS    + + +L +S     G  A  +
Sbjct: 240 TLFLNPGRIALFGYAHVP-WMRKHQRLIDETSLPSAAERLAMADLARSELLKAGYVAIGL 298

Query: 254 SNHSFL----------GAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +            G+   +   Y   +    IG G  +  ++  G  +    +    
Sbjct: 299 DHFARPDDSMAVALDDGSLKRNFQGYTTDQGEQLIGFGVSSIGKLSKGFVQNLPDV---- 354

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DI 356
            +W + +      V +   LS++ +    ++  L       + +        +      +
Sbjct: 355 GNWQRSIDAGKLPVSKGLPLSADDRLRGRIIEELMTNYACDLDEVCSAYHTGIHQLQSSM 414

Query: 357 ECERNLQRQGFIE----RVQFSRLRCTQRGMTM 385
           +    L   G +E    +   + +R T  G   
Sbjct: 415 DALDELAADGLVEINRKQNNGTVVRVTDEGRPY 447


>gi|260173781|ref|ZP_05760193.1| coproporphyrinogen III oxidase [Bacteroides sp. D2]
 gi|315922045|ref|ZP_07918285.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695920|gb|EFS32755.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 425

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 92/403 (22%), Positives = 157/403 (38%), Gaps = 31/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LVPYLKQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   +     
Sbjct: 87  PLTIGLTFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADPARLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV R+S+GVQS  ++ L  L R         A+   R   FP  + DLIY +  Q
Sbjct: 147 LLKQAGVARVSIGVQSFLDEELTALKRRPRQDMINQALEAIRKRQFPFFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L +  GT   +           ++V   +Y     +
Sbjct: 207 TVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERES--------DDVCFQMYCAACDL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS------ 296
               G    + S   F+   S            +  G G  S +    +    +      
Sbjct: 259 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVCQRCI 316

Query: 297 ---IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I+ +  +    V +NG        LS E+Q   F++  L    G+   +++   G +
Sbjct: 317 AGEIDDYMGTTDFTVARNGF------ILSQEEQRQRFIIKNLMYYMGLDKAEYKRRFGES 370

Query: 354 LD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            D +   R L  + +IE     R+  T  GM   D +   L +
Sbjct: 371 PDNVPLFRQLAERQWIEDTDNGRVCLTSEGMAYSDYI-GQLFI 412


>gi|313205039|ref|YP_004043696.1| oxygeN-independent coproporphyrinogen iii oxidase [Paludibacter
           propionicigenes WB4]
 gi|312444355|gb|ADQ80711.1| oxygen-independent coproporphyrinogen III oxidase [Paludibacter
           propionicigenes WB4]
          Length = 458

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 164/412 (39%), Gaps = 31/412 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y+ A   + + Q   S+ +YVH PFC + C +C  N+           +I   L E+  
Sbjct: 35  DYVPAVIQSNSEQP-ESISIYVHIPFCPQLCFFCGCNTSAFESAAKVRRYIDCVLKEIDT 93

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + Q +   R +S + +GGGTP+ I    I  I++ IA ++  + N EI IE +P+ + + 
Sbjct: 94  VAQHIDKKRKVSQVHWGGGTPNSINFDYIQEIMEKIASHFEYTKNAEIAIECSPAYLTME 153

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
           +       G NR+S+G+Q    + L+ + R          +  L +N F  ++ DL+Y L
Sbjct: 154 DIDRLAAIGFNRVSMGIQDFHPEVLKAINRREPKFPIEQVMERLRQNNFKGINLDLVYGL 213

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  ++  +++A+S + D +  +        +     K  +  +   ++ + +    
Sbjct: 214 PLQTLESFKENIEKAISLSPDRIVTFSYAHVP-WVNQNQTKMDESTMAGPDLKLQMLLAG 272

Query: 240 QSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY------GDYIGIGPGAHSRV 286
             + +  G  +  + + +    E   + HN     N+  Y      G     G    S++
Sbjct: 273 FKMMTNAGYESIGMDHFAKPTDELAIAKHNKKLHRNFQGYCTRETTGQVYAFGTSGISQL 332

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       K+   ++  +   G A+     ++ E+     ++  +     ++  + 
Sbjct: 333 ----WGSYAQNTKNLNQYMDEIESTGLAIDRGYSMTKEEIIIREVINQVMCNGYLNFTEI 388

Query: 347 EML---AGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                     +      D    +     G ++ V  + +  +  GM ++ ++
Sbjct: 389 AEHLKSTPEEIAAVTKYDPAMLQPFIEDGLVDIVDGN-IHVSADGMFVVRNI 439


>gi|237749800|ref|ZP_04580280.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
 gi|229374550|gb|EEO24941.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           bilis ATCC 43879]
          Length = 346

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/374 (26%), Positives = 160/374 (42%), Gaps = 30/374 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC F S V +  +    + Q+ L +++   +    + I+SIF GGGT
Sbjct: 3   LYIHIPFCDSKCGYCAFFSQVNKENM-ITPYFQALLKDIKHTLKHFSVKKITSIFVGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ ++   I + +      +S+ EIT E NP+ +  +     +  G NR+S+GVQS 
Sbjct: 62  PNFVDSKHYKEIFNLLMPLC--ASDCEITFEMNPNLITHSWLSEIKGLGANRLSIGVQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +  L+ L R H+  +   A  +A      +S DLIY     T  + E EL+ AL   + 
Sbjct: 120 YDDKLQMLERVHSYDDICRAFDIAYKHIENISLDLIYDCKLDTNERIEYELESALKLPIS 179

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L+I+  + F       D    S           +      G   YE+SN S+  
Sbjct: 180 HISAYSLSIDSNSRFG------DRKAYSLQSRESFGVFVRDFLQKKGFRQYEVSNFSYKN 233

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
               HNL YW    Y+G+G  +  RV    +    ++E++  +  +          ++E 
Sbjct: 234 K-CKHNLGYWNGEAYLGVGASSVGRVDSVRYFATPNLEQYITNPFQR---------KEEV 283

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           LS      E + MG R   G+            L    E NL  +        +R+    
Sbjct: 284 LSQNDLNFESIFMGFRSEIGVEKSLLNK---TKLKYVIESNLCYEY------DNRIYAND 334

Query: 381 RGMTMLDSVIANLA 394
               + DS+   LA
Sbjct: 335 --FFLADSIALYLA 346


>gi|325287113|ref|YP_004262903.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
 gi|324322567|gb|ADY30032.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           lytica DSM 7489]
          Length = 453

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 150/395 (37%), Gaps = 22/395 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISS 73
            +  + +Y+H PFC   C +C  +  + +    +  +IQ+ L E Q    +   +  +  
Sbjct: 47  ATEGISLYIHLPFCESLCTFCGCHKRITKRHEVETPYIQAVLKEWQLYCNMLPEKPIVKE 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+   P+N+  +++GI +    ++  E + E +P++    + Q     G  R+
Sbjct: 107 LHLGGGTPTFFTPENLQALINGIFRKAERAAEYEFSFEGHPNNTTKAHLQALYNVGFRRV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S GVQ       + + R  +          AR I    +  D+I+ LP QT+   E  + 
Sbjct: 167 SYGVQDYNSTVQKAINRVQSFENVKNVTEWAREIGYTSVGHDIIFGLPHQTLQHVEETIL 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +      D L+ Y                 D  LP+     D Y   +++ +  G     
Sbjct: 227 KTKELLPDRLAFYSYAHVPWLKGNGQRGYKDEDLPTATQKRDQYEKGKNLLAKVGYKEIG 286

Query: 253 ISNHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +    +SL+        + N+  Y        IG+G  + S     S        K
Sbjct: 287 MDHFALEN-DSLYQSMVTNNLHRNFMGYTPSKTQVMIGLGVSSIS----DSWYSFAQNVK 341

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW-EMLAGRNLDIEC 358
             E +  +V  N   +     L+ E       ++ L  R   S  +  E  A  +  ++ 
Sbjct: 342 SLEEYNHLVFNNIIPIYRGHILTQEDVVIRKHILNLMCRLETSWSNKNEEFAQLSETLDK 401

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            + ++  G IE +  ++L    +G   + ++    
Sbjct: 402 LQEMKNDGLIE-ISSTKLTVLDKGRPFIRNICMAF 435


>gi|153808208|ref|ZP_01960876.1| hypothetical protein BACCAC_02494 [Bacteroides caccae ATCC 43185]
 gi|149129111|gb|EDM20327.1| hypothetical protein BACCAC_02494 [Bacteroides caccae ATCC 43185]
          Length = 424

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 162/403 (40%), Gaps = 32/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + G+ +    +Y H PFC  KC YC+  S           ++ +   + Q + 
Sbjct: 30  LLPYLEQLQGRKA---SLYFHIPFCSHKCGYCNLFSLQTNRTEYIATYLDTLHRQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT   +  S   GGGTP L+    +  ++   A      S+   ++E +P   +     
Sbjct: 87  PLTAGLTFDSFAIGGGTPLLLTVPQLEQLMATAALFGVHPSHAFTSVETSPEYADRPRLN 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             +KAGV+R+S+G+QS +++ L+ + R    +    A+   R + FP  + DLIY +  Q
Sbjct: 147 VLKKAGVSRVSIGIQSFQDEELKAIKRRPRQNTIYQALDDIRQMDFPYFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L+ AL +  + L +Y L + +GT   +           ++V   +Y     +
Sbjct: 207 TVESFLYSLEEALRFQPNELFIYPLYVRQGTGITEREP--------DDVCFRMYRAACKL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS-----I 297
             A G    + S   F+   S            +  G G  S +    +    +     I
Sbjct: 259 LQAKGF--LQTSMRRFIHHPSTDAEVSCGDEVMLSCGSGGRSYLGDLHYATRYTVCQQCI 316

Query: 298 EKHPESWLK----MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
            +  + ++      V +NG        LS+++Q   F++  L    GI   ++    G  
Sbjct: 317 AREIDEYMATTDFTVARNGF------ILSAKEQQQRFIIKNLMYYMGIDKAEYTRRFGEP 370

Query: 354 LD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           LD     R L  Q +IE     R+R T  G+   D +   L +
Sbjct: 371 LDRTPLFRQLAEQYWIEET-PERIRLTPEGLGYSDYI-GQLFI 411


>gi|15834746|ref|NP_296505.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270284913|ref|ZP_06194307.1| coproporphyrinogen III oxidase [Chlamydia muridarum Nigg]
 gi|270288940|ref|ZP_06195242.1| coproporphyrinogen III oxidase [Chlamydia muridarum Weiss]
 gi|7190157|gb|AAF39000.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydia
           muridarum Nigg]
          Length = 457

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 167/403 (41%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
                 L +Y H PFC   C YC  +  + R +   +++I+S + EM+    L G  + +
Sbjct: 43  ADEHQPLSLYFHIPFCQSMCLYCGCSVVLNRKEEIVDHYIESLIQEMRLTFSLLGGKKPV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S+  E+ IE +P S+  + +     +  G
Sbjct: 103 SRIHFGGGTPSRLSRAQFTHLFTHIHQFFDLSNIEELAIEFDPRSLREDADKPLFLQNLG 162

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+SLG+Q  + +    + R  +  E++ A    R++ F  ++ DLIY LPKQT + ++
Sbjct: 163 FNRVSLGIQDTQWEVQEAVRRRQSYEESLLAYKQFRDLNFTGINIDLIYGLPKQTQSSFK 222

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +Q  L    D L+L+          ++        LPS      +Y+ ++      G 
Sbjct: 223 QTIQHILDMRPDRLALFSFAHVPWVKPHQKALRTK-DLPSMEEKFAIYSQSRQALIQEGY 281

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +L N     N+  Y      D +G G  A S +      + + 
Sbjct: 282 QAIGLDHFSLPDDPLTIALKNKTLIRNFQGYSLPPEEDLLGFGLSATSFI----RGIYLQ 337

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K    +   +     A V+ + LS + +  ++++  L     +S  ++E L     D+
Sbjct: 338 NSKDLREYSTTIHSGKLATVKGKILSQDDKIRKWVIHTLMCSFSLSKLEFEQLFHERFDL 397

Query: 357 ECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +      ++  G I R   S L+ T  G   +  +    
Sbjct: 398 YFADSYDRLCGMESAGLI-RQDSSSLQVTPLGELFVRVIATAF 439


>gi|308184453|ref|YP_003928586.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
 gi|308060373|gb|ADO02269.1| coproporphyrinogen III oxidase [Helicobacter pylori SJM180]
          Length = 457

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDLEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLESVLKLNPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILEALIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAQLRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GGDYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +  +  ++ L++
Sbjct: 394 FSVDFKVHFKKELEK 408


>gi|86138531|ref|ZP_01057104.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
 gi|85824591|gb|EAQ44793.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
          Length = 451

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/410 (20%), Positives = 164/410 (40%), Gaps = 29/410 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           + L+A + ++       + VY+H PFC + C +C   +   +     E++I +   E+  
Sbjct: 40  RQLAALDPDV------PVSVYIHIPFCERLCWFCACRTQGTQSLSPVESYIGTLEAELAL 93

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  +L     +  + +GGGTP+++ P  I  +   +   +  + + E ++E +P+ V+ +
Sbjct: 94  LAKELPAGLKMGRLHWGGGTPTILTPILIHRLARAVKNVFGQTPDWEFSVEIDPTLVDQD 153

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
                   G+NR S+G+Q  +      +GR        A +  L       ++ DL+Y L
Sbjct: 154 KIAALAAEGMNRASIGIQDFDPLVQEAIGRKQPYEATQACVEDLRAAGITSLNADLVYGL 213

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT  +    L + LS   D ++L+        +  +     + VLP ++    L   +
Sbjct: 214 PHQTPARMADTLNKVLSLKPDRIALFGYAHVP-WVAKRQQLINEAVLPDDSARYALAVQS 272

Query: 240 QSITSAHGLHAYEISNHSFL------GAESLH-NLNYWRYGD-----YIGIGPGAHSRVK 287
            S  +  G     I + +         A + H   N+  Y +      IGIG  + SR  
Sbjct: 273 ASAFAESGFETIGIDHFALPEDGLAKAARTGHLRRNFQGYTEDTCPALIGIGASSISRFP 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  + A +      +++K +     A      +S E Q     +  +     +     E
Sbjct: 333 GGYVQNASATP----AYVKQIEAGQLAGARGHEMSDEDQMRARAIEMIMCDFALDRTALE 388

Query: 348 MLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              G     L+ +  + ++R G +  +   +L  +  G  M   +IA+L 
Sbjct: 389 QQFGPLTAGLEPDLAKVVERFGTLVSLDDQKLEISPDGRPMT-RIIASLF 437


>gi|114764822|ref|ZP_01444004.1| coproporphyrinogen III oxidase [Pelagibaca bermudensis HTCC2601]
 gi|114542708|gb|EAU45731.1| coproporphyrinogen III oxidase [Roseovarius sp. HTCC2601]
          Length = 442

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 162/382 (42%), Gaps = 33/382 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           + ++ +Y+H PFC + C +C   +         E ++++   E+  + R L     +S +
Sbjct: 39  NGTVSLYLHVPFCRRLCWFCACRTQGTATLGPVETYVETLKAELDLLKRHLPRGVKLSRL 98

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTP+L+ P  +  ++D + +    + N E ++E +P+ ++          G+NR S
Sbjct: 99  HWGGGTPTLLSPDLMRALIDKVHEVAEFADNAEFSVEIDPNELDGERLDVLAAGGMNRAS 158

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  +E+  + +GR         A+ + R      ++ D++Y LP QT ++    +Q+
Sbjct: 159 IGVQDFDEEIQQTIGRPQGYDVTREAVEMIRERGVHSLNADILYGLPHQTRSRITETVQK 218

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            LS+A D ++LY        +  +        LP+    +DL++  + +    G     I
Sbjct: 219 LLSFAPDRVALYGYAHVP-WMAKRQQMIPSEALPTPAERLDLFDTARRLFVWDGYAEIGI 277

Query: 254 SNHSFLG-----AESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +        A+    L  N+  Y D      IG+G  + S+   G  + A S     
Sbjct: 278 DHFAAPDDGLAIAQKTGRLRRNFQGYTDDTSKVLIGLGASSISKFPQGYAQNAPST---- 333

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
             +   +R    A  +    S E     +  E LM   R+R G  ++D+    G + +  
Sbjct: 334 GVYTGSIRDGRFATAKGHAFSGEDTLRARMIEMLMCDFRIRSGELMRDY----GIS-ESA 388

Query: 358 CERNLQR-----QGFIERVQFS 374
                +R     +G +E  +  
Sbjct: 389 LNAMFKRVNNAFEGLLEITEDG 410


>gi|329943215|ref|ZP_08291989.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci Cal10]
 gi|332287795|ref|YP_004422696.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci 6BC]
 gi|313848367|emb|CBY17371.1| putative coproporphyrinogen biosynthesis-related protein
           [Chlamydophila psittaci RD1]
 gi|325506711|gb|ADZ18349.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci 6BC]
 gi|328814762|gb|EGF84752.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci Cal10]
 gi|328915053|gb|AEB55886.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           psittaci 6BC]
          Length = 458

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 168/415 (40%), Gaps = 36/415 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            KYL         + ++ L +Y H PFC   C YC  +  + R +   E +I + + EM+
Sbjct: 40  FKYLQ--------KDNSPLSLYFHIPFCQSMCLYCGCSVVINRREDIVEKYIDTLIKEME 91

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-- 117
           ++  L G  R  S I FGGGTPS +  +    +   I + + +S   EI IE +P S+  
Sbjct: 92  YVHTLLGGRRKTSRIHFGGGTPSRLSRKLFETLFSHIHRLFDLSEAEEIAIEFDPRSLRD 151

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLI 176
           +    +  +  G NR+SLGVQ  +      + R  +  E++ A    R   F  ++ DLI
Sbjct: 152 DDKKAEFIQSLGFNRVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLI 211

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +   L    D L+L+        +        +  +PS      +Y
Sbjct: 212 YGLPKQTKLTFTQTIADILHMRPDRLALFSFASVP-WIKPHQKAMKESDMPSMEEKFAIY 270

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHS 284
           +  +   +  G  A  + + S        +  N     N+  Y      D IG+G  + S
Sbjct: 271 SYARHTLTKAGYQAIGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMSSTS 330

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +      + +   K  ES+ + +     A V+ + LS + +  ++++  L     +S +
Sbjct: 331 FI----RGIYLQNAKTLESYHEKILSGSLATVKSKILSEDDKIRKWVIHKLMCTFVVSKE 386

Query: 345 DWEMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
           ++  L G   D     + +R       G I +   S L  T  G   +  +    
Sbjct: 387 EFTQLFGYCFDEYFSESQERISSMVTTGLI-QNSSSLLTVTPLGELFVRVIATAF 440


>gi|108563075|ref|YP_627391.1| coproporphyrinogen III oxidase [Helicobacter pylori HPAG1]
 gi|107836848|gb|ABF84717.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori HPAG1]
          Length = 457

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/394 (18%), Positives = 141/394 (35%), Gaps = 22/394 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLEWVLKLNPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
              +     ++ L++       +   L    +G 
Sbjct: 394 FSVDFKAHFKKELEK--LKPYEEAGLLVFNPKGF 425


>gi|257461411|ref|ZP_05626507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter gracilis RM3268]
 gi|257441134|gb|EEV16281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter gracilis RM3268]
          Length = 357

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 99/372 (26%), Positives = 171/372 (45%), Gaps = 28/372 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC  KCPYC F S   ++ + +  + ++   E++          IS++F GG
Sbjct: 1   MHIYIHVPFCTSKCPYCAFGSFSDKFSLAKS-YFRALKLEVRDFLAKNPHAQISTLFIGG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++      I   +A +   ++  EI+ EANP+S      +   + GVNRIS G Q
Sbjct: 60  GTPSAVDAGLYDEIFALLAPH--FTAKAEISSEANPNSASPAWLRAMCELGVNRISFGAQ 117

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  +  L+FLGR H+A++   A+  A+   F  ++ DLIYA         + E+      
Sbjct: 118 SFNDAKLKFLGRAHSAAQIFLAVQNAKAAGFDNINLDLIYASKFDDKRNLKFEMDALARC 177

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V HLS Y L++E+ T F+            +  +V L     ++ +  G   YEISN +
Sbjct: 178 EVPHLSAYALSLEENTPFFGRES-------FKRESVALAKFLFALAADSGFRQYEISNFA 230

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNL YWR  DY+G G  A       S ++ +S  K+ + ++    +      +
Sbjct: 231 ARGLRCKHNLAYWRGEDYVGFGAFAVG----TSAQMRLSSPKNLQDYIADPLQK-----Q 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           +E LS++ +  E + +GLR   G   +  +       ++   + L R+  ++  +     
Sbjct: 282 REALSAQDKKLERIFLGLRCVLGFEAQILDA-----AELSNAQLLVREKKLKFAEGKFYN 336

Query: 378 CTQRGMTMLDSV 389
                  + D +
Sbjct: 337 LN---FLLADEI 345


>gi|217032486|ref|ZP_03437978.1| hypothetical protein HPB128_156g16 [Helicobacter pylori B128]
 gi|298736363|ref|YP_003728889.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
 gi|216945832|gb|EEC24453.1| hypothetical protein HPB128_156g16 [Helicobacter pylori B128]
 gi|298355553|emb|CBI66425.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori B8]
          Length = 457

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLEWVLKLNPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GGDYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +  +  ++ L++
Sbjct: 394 FSVDFKVHFKKELEK 408


>gi|326800913|ref|YP_004318732.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
 gi|326551677|gb|ADZ80062.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobacterium
           sp. 21]
          Length = 449

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 81/406 (19%), Positives = 165/406 (40%), Gaps = 25/406 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +++SA    +       + +Y+H P+C + C YC  N+ + +    +  +I S L E Q 
Sbjct: 37  QWVSA--MRVAANVVGEISLYIHLPYCERLCTYCGCNTRITKNHSVERPYIDSVLQEWQL 94

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              Q++    I  +  GGGTP+   P+N++ ++  I +   V  +   + EA+P++    
Sbjct: 95  YLAQMSVKPKIVDLHLGGGTPTFFSPENLSYLIKEIIQYAHVDEHAAFSFEAHPANTTRE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           +       G  R+SLG+Q  + +  R + R  + ++ I     AR I    ++FDLIY L
Sbjct: 155 HLDALFALGFRRLSLGIQDFDAEVQRIINRKQSPADVIRVTQEARRIGYTSINFDLIYGL 214

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PKQ++ + +  +Q  ++   D ++ Y        +        +  LPS+   ++LY + 
Sbjct: 215 PKQSLLRIKDTIQMTIAMHPDRIAFYSYAHVP-WMKPGQRLYTEDDLPSDEAKLELYYVG 273

Query: 240 QSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGDY-----IGIGPGAHSRVK 287
           + +    G     + + +F              + N+  Y D      +G+G  A S V 
Sbjct: 274 KEMIVNAGYIDIGMDHFAFPTDSLALAARVGKLHRNFMGYTDIRPSLLLGLGVSAISDVG 333

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +   ++    E +  MV K    + +    +    + +  ++ L     + + D +
Sbjct: 334 TAYAQNVKTV----EEYRGMVEKGQFPLQKGHLQTEHDLSVKKQILRLMCEGRLPLSDVQ 389

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G    ++  + L   G +       L  T  G + L  +    
Sbjct: 390 ---GSPGVLKRLKPLIADGLVLLGAKE-LIVTDLGKSFLRVICMAF 431


>gi|255690142|ref|ZP_05413817.1| coproporphyrinogen III oxidase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260624426|gb|EEX47297.1| coproporphyrinogen III oxidase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 425

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 155/403 (38%), Gaps = 31/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LVPYLKQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT   +  S   GGGTP L+    +  +LD         S+   ++E +P   +     
Sbjct: 87  PLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAVLFGVYPSHTFTSVETSPEYADPARLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV R+S+GVQS  ++ L  L R         A+   R   FP  + DLIY +  Q
Sbjct: 147 LLKQAGVARVSIGVQSFLDEELTALKRRPRRDMINQALEAIRKRQFPFFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L +  GT   +           ++V   +Y     +
Sbjct: 207 TVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERES--------DDVCFQMYCAACDL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS------ 296
               G    + S   F+   S            +  G G  S +    +    +      
Sbjct: 259 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVCQRCI 316

Query: 297 ---IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I+ +  +    V +NG        LS E++   F++  L    G+   ++E   G +
Sbjct: 317 AGEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYERRFGES 370

Query: 354 LDIECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            D     R L  + +IE     R+  T  GM   D +   L +
Sbjct: 371 PDNVMLFRQLAERQWIENTDNGRICLTSDGMAYSDYI-GQLFI 412


>gi|163738169|ref|ZP_02145585.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
 gi|161388785|gb|EDQ13138.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
          Length = 451

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/393 (18%), Positives = 147/393 (37%), Gaps = 22/393 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            + VY+H PFC + C +C   +   +     E++I +   E+  + + L     +  + +
Sbjct: 50  PVSVYIHIPFCERLCWFCACRTQGTQTLSPVESYIGTVEKELSLLAEILPEGLRMGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   I      +++ E ++E +P+ V+        K G+NR S+G
Sbjct: 110 GGGTPTILPPALIHRLAQSIKSAVPPTTDWEFSVEIDPTMVDREKIAALAKEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  + +    +GR        A +  L       ++ DL+Y LP Q   +    + + L
Sbjct: 170 IQDFDPEVQTAIGRIQPFDVTAACVADLRAAGIHSLNTDLVYGLPHQDAARIAETVDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A D ++L+        +  +     D  LP +     L  L      + G     I +
Sbjct: 230 TLAPDRVALFGYAHVP-WVAKRQKLIDDTTLPGDETRYHLAELAAQKFQSVGFANIGIDH 288

Query: 256 HSFL------GAESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +           S H   N+  Y D      IG+G  + SR   G  + A +      +
Sbjct: 289 FARPQDGLNLARNSGHLRRNFQGYTDDHCPTLIGVGASSISRFDGGYVQNAAAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECER 360
           +++ +     A      L+   +     +  L     +   + +   G   + L  + + 
Sbjct: 345 YIQRIEAGDLAGTRGHQLTLIDKMRARAIEMLMCDFRLDRTELQHRFGSQTQQLTADLKA 404

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +   G +  +    L     G  +   + +  
Sbjct: 405 VMTTYGDLVTLTDEALVIEAEGRALTRIIASAF 437


>gi|313681728|ref|YP_004059466.1| oxygen-independent coproporphyrinogen iii oxidase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154588|gb|ADR33266.1| oxygen-independent coproporphyrinogen III oxidase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 353

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 104/376 (27%), Positives = 164/376 (43%), Gaps = 33/376 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSISSIFFG 77
           +Y+H PFC  KC YC FNS+V ++   +E ++ + L ++Q             I ++F G
Sbjct: 3   LYIHIPFCDSKCSYCAFNSYVDKF-ALREAYMNALLIQLQSELLRFNAGKDNPIETVFIG 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPS ++P     I + I     ++ + EIT EANP+S      +G  + G+NR+S GV
Sbjct: 62  GGTPSTVDPSLYRPIFEMIDPY--LAPHCEITSEANPNSATRTWMEGMFELGINRLSFGV 119

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           QS   + L+ LGR H+   A+ AI  A  I    +S DLIY +   T    + ++ +A S
Sbjct: 120 QSFNNEKLKTLGRAHHTQHALEAIRTASAIGYKHLSIDLIYGVKGDTKPLLKADIDQAFS 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +DH+SLY LTIE+ T F K  +  D  L           L + I +  G   YEISN 
Sbjct: 180 LPIDHISLYALTIEEETAFEKTPEMADEKL------ELTRWLFREI-TDRGFEQYEISNF 232

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                 S+HN+ YW +  YIG+G GA   ++   +     +  + +   +   +      
Sbjct: 233 G--TYRSIHNIGYWEHKPYIGLGAGAVGFLENRRYYPGTDVGYYIQHPCEFTTEEIEPFA 290

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
                       E L +G R   G+               +    L R+G ++       
Sbjct: 291 ---------LLSEKLFLGFRSCVGVDAALLSKK-----QKDQADLLCREGILKYDNGRYF 336

Query: 377 RCTQRGMTMLDSVIAN 392
                   + D +   
Sbjct: 337 NAD---FLLADEIALR 349


>gi|242310576|ref|ZP_04809731.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
 gi|239522974|gb|EEQ62840.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pullorum MIT 98-5489]
          Length = 455

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 71/399 (17%), Positives = 151/399 (37%), Gaps = 27/399 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y++  +N+     ++ L +Y+H PFC   C +C  N      +  +  +++    E++ +
Sbjct: 37  YINDLQND-----TSPLSLYIHLPFCRSACYFCGCNVIYTSKEENKTLYLKYLKKELEIL 91

Query: 63  RQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVN 120
           +  L   + +  + FGGGTP+    + + +++  +           EI  E +P      
Sbjct: 92  KNTLNCNKEVYQLHFGGGTPTFFNAKELEILITMLKNTFPNFDKEAEIACEIDPRFFTKE 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
             +  +  G NR+S G+Q    +    + R        +AI  AR      ++FDLIY L
Sbjct: 152 QMEVLKNGGFNRLSFGIQDFNPKVQEAIHRIQPFELVESAISTAREYGITSINFDLIYGL 211

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  ++  L++ L+   D  +++        +   M K  +  LP+    +++   T
Sbjct: 212 PYQTLKSFQETLKQCLNLNPDRFAIFNYAHVP-WIKKTMRKIDETTLPTPEEKLNILKTT 270

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                + G     + + +    E            N+  Y        IGIG  +     
Sbjct: 271 IHTLQSCGYKMIGMDHFAKSNDELFKSIQKGQLRRNFQGYSTKGGTQTIGIGLTSIG--- 327

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                      K   S+   + K      +   LS + +  + ++M L     ++ K+ E
Sbjct: 328 -EGVDYYAQNYKDLPSYQNAIDKGILPFFKGIKLSLDDKIRKAVIMQLMSNFQLNFKNIE 386

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
                + +     +L+     E+     +  ++ G+ + 
Sbjct: 387 EQFNISFEDYFRDSLKELEIFEQEDL--ITLSKEGIKVS 423


>gi|297155981|gb|ADI05693.1| coproporphyrinogen III oxidase [Streptomyces bingchenggensis BCW-1]
          Length = 453

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 77/401 (19%), Positives = 155/401 (38%), Gaps = 13/401 (3%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           +  +    +  +SL +YVH PFC  +C +C+  + V   +     ++ +   +   +R  
Sbjct: 40  SLRDLWAAEPKDSLSLYVHIPFCEVRCGFCNLFTRVGAPEGLVSAYLDALERQADTVRDA 99

Query: 66  TG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQ 123
            G     ++  FGGGTP+ +E   +  + D  ++      + V +++EA+P++   +   
Sbjct: 100 LGDGARFATAAFGGGTPTFLEAAELERLCDIASRRMGADLAAVPLSVEASPATATADRLA 159

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQ 182
              + G  R+SLGVQS  +   R   R     +  AA+   R     + + DLIY +  Q
Sbjct: 160 VLAERGTTRLSLGVQSFVDAEARSAVRPQRREDVEAALGRIREAGIPVLNIDLIYGIDGQ 219

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   W   L  AL++  + L LY L +   T   +           +   + LY   +  
Sbjct: 220 TERSWRQSLDAALAWRPEELYLYPLYVRPLTGLGRRDAAATDTE-WDAQRLRLYRAGRDH 278

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKH- 300
             AHG     +              +Y    D  +G+G GA S      +    +++   
Sbjct: 279 LLAHGYEQVSMRMFRRRDTPGTGGEDYACQTDGMVGLGCGARSYTSALHYSFDYAVDMRE 338

Query: 301 ----PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
                + +      +         +++++     L+  +   EG+ +  +    G +   
Sbjct: 339 IRGIIDDYTARPAADFARAEVGRAMTADEARRRHLLQSVLQAEGMPLAGYRARFGTDPAE 398

Query: 357 ECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +    L R   +G+++      LR +  G+   D++   L 
Sbjct: 399 DFPAELARFAERGWLDPDAAGLLRLSPEGLAHSDALGPELF 439


>gi|293370683|ref|ZP_06617233.1| coproporphyrinogen dehydrogenase [Bacteroides ovatus SD CMC 3f]
 gi|292634207|gb|EFF52746.1| coproporphyrinogen dehydrogenase [Bacteroides ovatus SD CMC 3f]
          Length = 414

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 156/403 (38%), Gaps = 31/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 19  LVPYLKQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   +     
Sbjct: 76  PLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADPTRLD 135

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV R+S+GVQS  ++ L  L R         A+   R   FP  + DLIY +  Q
Sbjct: 136 LLKQAGVARVSIGVQSFLDEELTALKRRPRRDMINQALEAIRKRQFPFFNIDLIYGIRGQ 195

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L +  GT   +           ++V   +Y     +
Sbjct: 196 TVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERES--------DDVCFQMYCAACDL 247

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS------ 296
               G    + S   F+   S            +  G G  S +    +    +      
Sbjct: 248 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVCQRCI 305

Query: 297 ---IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I+ +  +    V +NG        LS E++   F++  L    G+   +++   G +
Sbjct: 306 AGEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYKRRFGES 359

Query: 354 LDIECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            D     R L  + +IE     R+  T  GM   D +   L +
Sbjct: 360 PDNVMLFRQLAERQWIENTDNGRICLTSDGMAYSDYI-GQLFI 401


>gi|90407199|ref|ZP_01215386.1| coproporphyrinogen III oxidase [Psychromonas sp. CNPT3]
 gi|90311622|gb|EAS39720.1| coproporphyrinogen III oxidase [Psychromonas sp. CNPT3]
          Length = 392

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 149/382 (39%), Gaps = 27/382 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N  + R++   + ++     E++        R ++ + +GGGTP+ + P  I+ 
Sbjct: 1   CYFCGCNKIITRHQEKADVYLDHLEQEIKLQAPHFKNRLVTQLHWGGGTPTFLLPAQISR 60

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           ++D +  +++ +   E++IE +P   E++      K G NR+SLGVQ   +   + + R 
Sbjct: 61  LMDILRAHFSFAKGAELSIEVDPRKFELSTIDLLAKEGFNRLSLGVQDFNKAVQKAINRE 120

Query: 152 HNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            + +     +  A+   F   + D+IY LP QT   +   L + L      LS++     
Sbjct: 121 QDEAFIEQLLQRAKEQGFQSTNLDMIYGLPLQTKDTFAHTLNKVLELDPARLSIFNYAHM 180

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE-------- 262
             ++F    K  D  +P     + +   T    +  G     + + +    E        
Sbjct: 181 P-SIFAAQRKINDEDMPKPAEKLAMLQYTIEFLTQSGYQFIGMDHFAKPDDELAIAQREG 239

Query: 263 SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           +LH  N+  Y      D +G+G  A S++           +K    + + +    HA   
Sbjct: 240 TLHR-NFQGYTTQEDADLLGLGVSAISQIG----HCYSQNQKVLSVYYQQITDKKHAQWR 294

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------DIECERNLQRQGFIERV 371
              L+ +      ++  L     + +K+ E     +       DI+  +   +   +  +
Sbjct: 295 GVALNQDDLIRRQVIKKLICNFKLDIKEIESTFNLDFNDYFAQDIKLLQCFIKDDLLS-I 353

Query: 372 QFSRLRCTQRGMTMLDSVIANL 393
               +    +G  ++ ++  + 
Sbjct: 354 DNQYITVHPKGRLLIRNICMSF 375


>gi|295689289|ref|YP_003592982.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
 gi|295431192|gb|ADG10364.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
          Length = 459

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 144/401 (35%), Gaps = 26/401 (6%)

Query: 5   SAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM- 62
             Y + + G      + +Y H PFC + C YC  N+ V + +     +++  + E+  + 
Sbjct: 43  EVYGDWLAGLDPREPVSLYAHIPFCDRLCWYCGCNTRVVKKQALISEYVERLVDELALVE 102

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            +L G     ++  GGGTP+++   ++  +   +   +  +  VEI+ E +P+ +  +  
Sbjct: 103 ARLPGRIKAGAVHLGGGTPNMLSRDDLVRLFGALRHVFPFAPGVEISAELDPAVLTESWV 162

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           +     G+ R SLGVQ L       + R         A H  R      ++ DL+Y LPK
Sbjct: 163 KAAAFHGLTRASLGVQDLAPHVQEAVNRVEPFEVVARATHWLRQAGVASINLDLMYGLPK 222

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q        L + L+   + ++L+          ++     +  L   N   +       
Sbjct: 223 QMTADVVATLDKVLTLRPERIALFGYAHVPWARTHQK-LIREEDLADANGRFEQSQAAAE 281

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVG 289
                G  A  + + +    +            N+  Y        IG+G  +  R+  G
Sbjct: 282 RLVKAGYVAIGLDHFALPNDDLALGVATGTLRRNFQGYTTDQHPTLIGLGASSIGRMPGG 341

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +   +      +W   + +    V     L+++ +    ++  L     + +      
Sbjct: 342 YVQNLTAEV----AWRDAIVQGRLPVARGVKLTADDRLRADVIERLMCDFQVDLAAVAAR 397

Query: 350 AGRN-----LDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
            G +      DI     L+  G +E V    +R T  G   
Sbjct: 398 HGVSSAIFAADITKLAELRADGLVE-VAGDVVRVTATGRPF 437


>gi|118354812|ref|XP_001010667.1| oxygen-independent coproporphyrinogen III oxidase, putative family
           protein [Tetrahymena thermophila]
 gi|89292434|gb|EAR90422.1| oxygen-independent coproporphyrinogen III oxidase, putative family
           protein [Tetrahymena thermophila SB210]
          Length = 444

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 190/421 (45%), Gaps = 50/421 (11%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENF---IQSFLTEMQWMR------------Q 64
           +Y+H PFC KKC YC F  H + + K   E+F    Q++L  ++               Q
Sbjct: 12  IYIHLPFCQKKCFYCSFPVHAIGKNKQDNEHFDNIQQTYLKYIKQEIVQTNIMLFKHHNQ 71

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV-SSNVEITIEANPSSVEVNNFQ 123
           +   + + SI+FGGGTPSL +P+ I  IL+ I         + EIT+E +P + +    Q
Sbjct: 72  IWQKKPLKSIYFGGGTPSLFQPEYIKEILNLIQSEGFFIQDDTEITMECDPGTFDAEKIQ 131

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-----RNIFPRMSFDLIYA 178
            Y +  +NRISLG+QS  ++ L+ L R  NA     AI +            +S DLI  
Sbjct: 132 FYEELKINRISLGIQSFNDKILQNLNRPQNAQTNYEAIQILKNSAKFKYLSNVSIDLIMN 191

Query: 179 LPKQT---------------MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            P+ T                  W+ +L++ +     H+S+Y L IE G+ FY+ +   +
Sbjct: 192 QPQMTCSKDKNNLSINLNEVDQIWDQDLEQVVQLKPGHISIYSLAIEPGSYFYEKNNFRE 251

Query: 224 --LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-AESLHNLNYWRY-GDYIGIG 279
               LPS+  A D +  T    S    + YEIS++      +  HN  YW    D++  G
Sbjct: 252 GQFPLPSDERAADNFIKTHQKLSPI-YNHYEISSYVRSDLNQPKHNPIYWEGNKDFLAFG 310

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE--KEFLSSEQQADEFLMMGLRL 337
            GA S +    +    ++ ++ E +++ + KN +  +E  ++    + Q +  LM  LR 
Sbjct: 311 MGASSLLNYRRYTRPKTVTRYYE-YVEQLNKNPNFYLENGEDESDIQSQIESILMGRLRT 369

Query: 338 REGISVKDWEMLAGRNLD----IECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIAN 392
            +G+ + D +   G ++      + E  L +  ++       L+     G  + D ++A 
Sbjct: 370 FQGLDLLDIKNSYGEDIYNIICNKIEMLLLKSPYLIFQNQRYLKLKCPEGYLVCDDIVAE 429

Query: 393 L 393
           +
Sbjct: 430 I 430


>gi|153949384|ref|YP_001402751.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|186893702|ref|YP_001870814.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|152960879|gb|ABS48340.1| radical SAM domain/HemN domain protein [Yersinia pseudotuberculosis
           IP 31758]
 gi|186696728|gb|ACC87357.1| Radical SAM domain protein [Yersinia pseudotuberculosis PB1/+]
          Length = 437

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +     E +    L E  M+    L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQ-SGSTERYTDYLLRELSMEADSPLLQGGPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+GVQ
Sbjct: 115 GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKADRDQAIRFLTDLATRDRAAVVCDLMFGLPHQTPEIWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      ++
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRLIDSGQKPLM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQF 373
                S E           +L+ GI V     L+    D      L  Q +   + +   
Sbjct: 351 MMTQASGEHPWR------AKLQSGIEVGRL-DLSELIADPYPLMPLISQWYQSNLLKDNS 403

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 404 FCLRLTDSGRFWASNIMQAL 423


>gi|237722905|ref|ZP_04553386.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
 gi|299146603|ref|ZP_07039671.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Bacteroides sp. 3_1_23]
 gi|229447427|gb|EEO53218.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_2_4]
 gi|298517094|gb|EFI40975.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Bacteroides sp. 3_1_23]
          Length = 425

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 156/403 (38%), Gaps = 31/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LVPYLKQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   +     
Sbjct: 87  PLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADPTRLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV R+S+GVQS  ++ L  L R         A+   R   FP  + DLIY +  Q
Sbjct: 147 LLKQAGVARVSIGVQSFLDEELTALKRRPRQDMINQALEAIRKRQFPFFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L +  GT   +           ++V   +Y     +
Sbjct: 207 TVASFLYSLEQALLFQPNELFIYPLYVRPGTAITERES--------DDVCFQMYCAACDL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS------ 296
               G    + S   F+   S            +  G G  S +    +    +      
Sbjct: 259 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVCQRCI 316

Query: 297 ---IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I+ +  +    V +NG        LS E++   F++  L    G+   +++   G +
Sbjct: 317 AGEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKTEYKRRFGES 370

Query: 354 LDIECE-RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            D     R L  + +IE     R+  T  GM   D +   L +
Sbjct: 371 PDNVTLFRQLAERQWIENTDNGRVCLTSEGMAYSDYI-GQLFI 412


>gi|62185448|ref|YP_220233.1| coproporphyrinogen III oxidase [Chlamydophila abortus S26/3]
 gi|62148515|emb|CAH64286.1| putative coproporphyrinogen biosynthesis-related protein
           [Chlamydophila abortus S26/3]
          Length = 458

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 94/394 (23%), Positives = 163/394 (41%), Gaps = 28/394 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           + ++ L +Y H PFC   C YC  +  + R +   EN+I + + EM+++  L G  R  S
Sbjct: 45  KDNSPLSLYFHIPFCQSMCLYCGCSVVINRREDVVENYIATLIKEMEYVHTLLGGRRKTS 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
            I FGGGTPS +  +    +   I + + +S   EI IE +P S+  +    +  +  G 
Sbjct: 105 RIHFGGGTPSRLSRKLFETLFSHIHRLFDLSEAEEIAIEFDPRSLRNDDTKAEFIQSLGF 164

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NR+SLGVQ  +      + R  +  E++ A    R   F  ++ DLIY LPKQT   +  
Sbjct: 165 NRVSLGVQDTQAAVQEAVRRRQSYEESLYAYEKFRELGFESINIDLIYGLPKQTKVTFTQ 224

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +   L    D L+L+        +        +  +PS      +Y+  +   +  G  
Sbjct: 225 TIADILHMRPDRLALFSFASVP-WIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQ 283

Query: 250 AYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
           A  + + S        +  N     N+  Y      D IG+G  + S +      + +  
Sbjct: 284 AIGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMSSTSFI----RGIYLQN 339

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  ES+ + +     A  + + LS + +  ++++  L     +S K++  L G   D  
Sbjct: 340 AKTLESYHQKILSGSLATTKSKILSEDDKIRKWVIHKLMCTFVVSKKEFIQLFGYCFDEY 399

Query: 358 CERNLQRQ------GFIERVQFSRLRCTQRGMTM 385
              + +R       G I +   S L  T  G   
Sbjct: 400 FAESQERINSMETTGLI-QNSSSFLTVTPLGELF 432


>gi|298487799|ref|ZP_07005840.1| Coproporphyrinogen III oxidase, oxygen-independent [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157891|gb|EFH98970.1| Coproporphyrinogen III oxidase, oxygen-independent [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 460

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 75/412 (18%), Positives = 147/412 (35%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            + L A   +   +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38  FELLHALRES--RKALRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +    +   +  +  ++ +    + +  IE +P   
Sbjct: 96  MLACHLAPGQVVEQLHLGGGTPTFLSHAELRRFMAQLRAHFNLLEDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   +   +    D LS++         F    +     LP     + + 
Sbjct: 216 YGLPRQTAQAFSRTVDEIIELQPDRLSVFNYAHLPE-RFMPQRRIDTAELPDARSKLLML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             T       G     + + +    E            +   Y  +G  D IG+G  A S
Sbjct: 275 ERTVEQLGNAGYRYIGMDHFALPDDELAIAQEDLTLQRNFQGYTTHGHCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S + +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLSDYQRLLDSDQPATRRGLMCSDDDRIRRAVIQQLICHFMLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           + E     +              +   G I       +     G  ++ +V 
Sbjct: 391 EIEKAFSIDFRDYFSDAWPQLLGMAEDGLIALSAAG-IEVKPSGRLLVRAVC 441


>gi|208434587|ref|YP_002266253.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
 gi|208432516|gb|ACI27387.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori G27]
          Length = 457

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 136/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAQLRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHQYEKALDWGHLPVERGVALTKEDALRKEVIMHMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSVDFKAHFKKELEK 408


>gi|146282193|ref|YP_001172346.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri A1501]
 gi|145570398|gb|ABP79504.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
          Length = 460

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 153/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   Q S  L +YVH PFC   C YC  N  + + +   + +++    E++
Sbjct: 38  FDLLHALRSS--RQASRPLSLYVHLPFCANVCYYCGCNKIITKDRGRAQPYLERLEKEIE 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + + +IE +P   
Sbjct: 96  LISCHLGKDQLVEQLHFGGGTPTFLSHDELRRLMKHLRQHFNLQDDDHGDFSIEVDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NRIS+GVQ L+ +  R + R     +    I  AR + +  ++ DLI
Sbjct: 156 DWPTIGLLRELGFNRISIGVQDLDPEVQRAINRMQTLEQTRTIIEAARTLQYRSLNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT  ++   ++  +    D LSL+         F    +     LP+    + + 
Sbjct: 216 YGLPLQTPARFAKTVEAIIDLQPDRLSLFNYAHLPE-RFAPQRRINASDLPAPAEKLAML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             +  + +  G     + + +    E            +   Y  +G  D +G+G  A S
Sbjct: 275 EQSIHLLTDAGYRYIGMDHFALPDDELAMAQEDGSLQRNFQGYTTHGHCDLVGLGMSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   + +   A       + +      ++  L     +S  
Sbjct: 335 QIGD----LYCQNHSDIAEYQHQLDRGQLATARGLRCNQDDLIRRDVIQALICDFELSFA 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E                    +   G IE +  S L     G  ++ S+ 
Sbjct: 391 RIEHDHAIEFRHYFAEPWPMLEQMAADGLIE-ISESHLIVQPAGRLLVRSIC 441


>gi|110347097|ref|YP_665915.1| coproporphyrinogen III oxidase [Mesorhizobium sp. BNC1]
 gi|110283208|gb|ABG61268.1| coproporphyrinogen III oxidase, anaerobic [Chelativorans sp. BNC1]
          Length = 451

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 150/399 (37%), Gaps = 26/399 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISS 73
             + + +Y+H PFC   C YC  ++ + R      +++     E++ + +LT P+  +S+
Sbjct: 44  AGDPVSLYLHIPFCRSMCWYCGCHTTITRQDAPILDYLVVLREEIRMVAELTPPQLGVSA 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP++I P     ++  +  N+  +    + IE +P ++           G+ R 
Sbjct: 104 VHFGGGTPTIIAPAEFLALMALLRCNFDFTDTAAVAIEIDPRTLTAEMAATLGATGIGRA 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS +    + + R     +  AA+  L R     ++FDLIY LP QT+        
Sbjct: 164 SLGVQSFDPIVQKAVNRIQTPEQTTAAVLDLRRAGVAEINFDLIYGLPHQTVRSCVETAN 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++   D  +++       +         +  LP      +          A G     
Sbjct: 224 IAVTMRPDRFAVFGYAHVP-SFKKHQRMIDEAALPGSAARSEQAAAVAGTLVAAGYRQVG 282

Query: 253 ISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +  G E            N+  Y        +G G  A  RV  G  +  ++    
Sbjct: 283 LDHFALPGDELVLMQKAGRLRRNFQGYTTDTCETLVGFGASAIGRVGEGYVQNEVA---- 338

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG------RNL 354
              + + +     A  +   L++E      ++  L       +    +  G       + 
Sbjct: 339 SGVYSQRIASRHLATAKGYRLTAEDSIRAAIIERLMCDFEADIPALCIARGFDAAGILDA 398

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +  + L + G I+ +    +R  Q    ++ +V A  
Sbjct: 399 AADMLKPLVQDGVID-ISDGFIRVRQDHRFIIRAVAAAF 436


>gi|237797597|ref|ZP_04586058.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331020447|gb|EGI00504.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 460

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 156/412 (37%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +    L +YVH PFC   C YC  N  V + +   + ++Q    E+Q
Sbjct: 38  FDLLQALRDS--RKALRPLSLYVHLPFCANICYYCACNKVVTKDRSRAQLYLQRLEHEIQ 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  +  GGGTP+ +  + +  ++  +   +T+    + + +IE +P   
Sbjct: 96  MLACHLAPGQVVKQLHLGGGTPTFLNHEELRRLMAQLRACFTLLDDDSGDYSIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLI
Sbjct: 156 DWATMGLLRELGFNRVSLGVQDLDPAVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP+QT   +   L   ++   D LS++         F    +     LP+    + + 
Sbjct: 216 YGLPRQTPDAFSGTLDEIINLQPDRLSVFNYAHLPE-RFMPQRRIDASELPTAESKLIML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE---SLHNL----NYWRYG-----DYIGIGPGAHS 284
             T     + G     + + +    +   +  +L    N+  Y      D IG+G  A S
Sbjct: 275 ERTLEQLGSAGYRHIGMDHFALPDDDLAIAQEDLTLQRNFQGYTTQNDCDLIGLGVSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          + +++  +  A       S + +    ++  L     +   
Sbjct: 335 QIGE----LYSQNSSDLTDYQRLLDSDQPATRRGLTCSDDDRIRSAVIQQLICHFTLDFA 390

Query: 345 DWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E     +  I           +   G I     +R+     G  ++ SV 
Sbjct: 391 AIEKAFRIDFRIYFNDAWPQLLVMANDGLIALSD-TRIDVRPAGRLLVRSVC 441


>gi|22124461|ref|NP_667884.1| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|51594699|ref|YP_068890.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108809985|ref|YP_653901.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108813540|ref|YP_649307.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145600930|ref|YP_001165006.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|150260665|ref|ZP_01917393.1| putative coproporphyrinogen III oxidase [Yersinia pestis CA88-4125]
 gi|165926696|ref|ZP_02222528.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936465|ref|ZP_02225033.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010462|ref|ZP_02231360.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213879|ref|ZP_02239914.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167402200|ref|ZP_02307673.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419408|ref|ZP_02311161.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426180|ref|ZP_02317933.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467579|ref|ZP_02332283.1| coproporphyrinogen III oxidase [Yersinia pestis FV-1]
 gi|170026098|ref|YP_001722603.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|218927493|ref|YP_002345368.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229836544|ref|ZP_04456710.1| putative coproporphyrinogen III oxidase [Yersinia pestis Pestoides
           A]
 gi|229840152|ref|ZP_04460311.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842233|ref|ZP_04462388.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904028|ref|ZP_04519141.1| putative coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|270488987|ref|ZP_06206061.1| radical SAM domain protein [Yersinia pestis KIM D27]
 gi|294502357|ref|YP_003566419.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|21957250|gb|AAM84135.1|AE013656_3 hypothetical [Yersinia pestis KIM 10]
 gi|51587981|emb|CAH19584.1| putative coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777188|gb|ABG19707.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108781898|gb|ABG15956.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|115346104|emb|CAL18972.1| putative coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|145212626|gb|ABP42033.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|149290073|gb|EDM40150.1| putative coproporphyrinogen III oxidase [Yersinia pestis CA88-4125]
 gi|165915581|gb|EDR34190.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921319|gb|EDR38543.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990552|gb|EDR42853.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204854|gb|EDR49334.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166963402|gb|EDR59423.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167048381|gb|EDR59789.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054891|gb|EDR64693.1| radical SAM domain/HemN domain protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752632|gb|ACA70150.1| Coproporphyrinogen dehydrogenase [Yersinia pseudotuberculosis
           YPIII]
 gi|229679798|gb|EEO75901.1| putative coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|229690543|gb|EEO82597.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696518|gb|EEO86565.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706228|gb|EEO92236.1| putative coproporphyrinogen III oxidase [Yersinia pestis Pestoides
           A]
 gi|262360439|gb|ACY57160.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|262364387|gb|ACY60944.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
 gi|270337491|gb|EFA48268.1| radical SAM domain protein [Yersinia pestis KIM D27]
 gi|294352816|gb|ADE63157.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|320013850|gb|ADV97421.1| putative coproporphyrinogen III oxidase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 437

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 88/380 (23%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +     E +    L E  M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQ-SGSTERYTDYLLRELSMEADSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+GVQ
Sbjct: 115 GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGVQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKADRDQAIRFLTDLATRDRAAVVCDLMFGLPHQTPEIWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      ++
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRLIDSGQKPLM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQF 373
                S E           +L+ GI V     L+    D      L  Q +   + +   
Sbjct: 351 MMTQASGEHPWR------AKLQSGIEVGRL-DLSELIADPYPLMPLISQWYQSNLLKDNS 403

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 404 FCLRLTDSGRFWASNIMQAL 423


>gi|317181978|dbj|BAJ59762.1| coproporphyrinogen III oxidase [Helicobacter pylori F57]
          Length = 457

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     +
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIN 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVILTKEDVLRKEVIMQMMSNLKLDYSKIEER 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|260754040|ref|YP_003226933.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258553403|gb|ACV76349.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 453

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 78/405 (19%), Positives = 155/405 (38%), Gaps = 30/405 (7%)

Query: 5   SAYENNMTGQ----------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           + + N++T +            + + VY+H PFC + C YC  ++ V R +     ++ +
Sbjct: 32  ADFRNDLTPKEHAIRIKNIAPDSRISVYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDT 91

Query: 55  FLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            + E++ +  L      I  + +GGGTPS+I  + I  ++  + + +  + ++   +E +
Sbjct: 92  LVKEIETVGNLAPNHLKIGHLSWGGGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELD 151

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MS 172
           P  ++    Q     G+NR SLGVQ       + +GR     +   AI   R      ++
Sbjct: 152 PRLLDAEFAQNLFDIGINRTSLGVQDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVN 211

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL+Y LP Q + +  +  Q  L  + D ++ +                 +  LP     
Sbjct: 212 FDLLYGLPHQGLDEIRLNCQETLRLSPDRIACFGYAHLPE-RKANQKLIDESALPQTKER 270

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYGD-----YIGIGP 280
            +   L   I   +G  A  I + +           E     N+  Y        IG+G 
Sbjct: 271 FEQAALIAEILQQNGYQAIGIDHFAKTDDLLAVAAREKKLRRNFQGYTTDNEPVLIGLGA 330

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A S          I      +++ + +++ G A      +S E      ++  L     
Sbjct: 331 SAISTFSDA----YIQNIADIKNYSRAIKEQGLASFRGIDISQEDHLRGEIISALMCHFA 386

Query: 341 ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           + +  ++       +     +L+ +G I + Q +R+  T  G   
Sbjct: 387 VDLTPYDKSPSLEDEKRELSHLEEEGLI-QFQQNRIEMTDAGRPF 430


>gi|317012483|gb|ADU83091.1| coproporphyrinogen III oxidase [Helicobacter pylori Lithuania75]
          Length = 457

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 141/394 (35%), Gaps = 22/394 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEIFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDLEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GGDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDALRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
              +     ++ L++       +   L    +G 
Sbjct: 394 FSIDFKAHFKKELEK--LKPYEEAGLLVFNPKGF 425


>gi|242129430|gb|ACS83765.1| coproporphyrinogen III oxidase [Nonomuraea sp. WU8817]
          Length = 414

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 91/387 (23%), Positives = 165/387 (42%), Gaps = 19/387 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWMRQLTG 67
               L +YV+ PFC  KC +CD+ + V             +  ++ + + +++      G
Sbjct: 17  AEQPLLIYVNVPFCNSKCHFCDWVTEVPLADLRLTPDSSPRRRYVAALVKQIETHAPTLG 76

Query: 68  P--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                   +++GGGT S++  + I  +   +A  + +   VE TIE +P S++    + +
Sbjct: 77  GLGYRPEVMYWGGGTASILTIEEIEAVAGALAARFDLGGLVEATIEGSPESMDPGKLKLF 136

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R  G NRIS+GVQ+ ++  LR +GR H+A +A  A+ +A +  F  ++ DLI   P Q  
Sbjct: 137 RAIGFNRISIGVQAFDDARLRRIGRVHSAEQAERAVRMAADAGFDNINIDLIVGFPGQGA 196

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +    +Q A++  V+H S+Y      GT+  +    G +        +  Y+  + + +
Sbjct: 197 DEVSRTIQHAVTLPVNHFSVYPYRPTGGTVMRRQVGRG-MGRIDVEEQLRSYDHARDLLA 255

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
            HG   Y  +       ES   + Y    D+IG G GA+S +             +    
Sbjct: 256 RHGFEEYATAYFGAPRCESDE-VYYKLTMDWIGFGSGANSLIG-------TRFLLNDRGG 307

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           L       H        S+      FL   L   +G+  + +++  GR+L   CE    R
Sbjct: 308 LHRFSTAPHRFDSDTPASAPHLTRHFLAQALTTVDGMDARTFQLRTGRSLRAACEEPAVR 367

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIA 391
           +   +  +  RL    RG+ +    +A
Sbjct: 368 RMLEQINRRGRLIVDSRGIRLHRDDMA 394


>gi|322378527|ref|ZP_08052975.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS1]
 gi|322379761|ref|ZP_08054071.1| coproporphyrinogen III oxidase [Helicobacter suis HS5]
 gi|321147832|gb|EFX42422.1| coproporphyrinogen III oxidase [Helicobacter suis HS5]
 gi|321149041|gb|EFX43493.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           suis HS1]
          Length = 465

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 79/409 (19%), Positives = 149/409 (36%), Gaps = 31/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
             + A++ +        L +Y H PFC   C +C  +      +  +E +I     E+  
Sbjct: 46  DLIEAFDRS---NPQIPLSLYFHLPFCKSACYFCACSVIYTNSQAKKERYIIYLQKELDL 102

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEV 119
           ++Q     R +  + FGGGTP+      + +I+  I   +   SS  E++ E +P     
Sbjct: 103 LKQYLDTKREVVQLHFGGGTPTFFNATQLEIIIQSIYSLFSNFSSKAELSCEIDPRHFTF 162

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
              Q  +  G NR+S G+Q  +    R + R  +       +  AR+     ++FDLIY 
Sbjct: 163 EQMQVLKNQGFNRLSFGIQDFDPVVQRAVNRLQSFELVQEKVQWARDCGIHSINFDLIYG 222

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q++  +E  L + L    D L+++              K     LPS    ++L   
Sbjct: 223 LPFQSIQSFEQTLLKVLKLDPDRLAVFNYAHVP--WIKHTMKIDPKTLPSPEQKLELLQF 280

Query: 239 TQSITSAHGLHAYEISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRV 286
             +    HG     + + +    E   +L N     N+  Y        IG+G  +    
Sbjct: 281 LIAFLKDHGYEMIGMDHFAKKDNELYKALQNKELRRNFQGYTTQKFSQTIGVGVTSIG-- 338

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                       K  + + + +      V     LS+E +  + ++M L     I     
Sbjct: 339 --EGLDYYTQNFKDLKHYEQALDNRHLPVERGIVLSAEDRLRKEVIMHLMNNLEIDFASI 396

Query: 347 EMLAGRNLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSV 389
           E     +     +  L      ++ G +       L+ +  G  ++ ++
Sbjct: 397 ERAFNIDFKAHFKEALKMLKPYEQDGLLTLSDTG-LKTSATGAMLVRNI 444


>gi|223939717|ref|ZP_03631589.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
 gi|223891588|gb|EEF58077.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
          Length = 463

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 86/405 (21%), Positives = 171/405 (42%), Gaps = 19/405 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +  SA E     +  N LG+Y+H PFC K+C +C F  +  +      N+I++ L E   
Sbjct: 58  ELFSALER--PPKLGNPLGIYLHIPFCRKRCHFCYFRVYTDKDSASIRNYIEATLKEFAI 115

Query: 62  MR--QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                    R  + I+FGGGTPS +    +  + DG+          E+  EA P ++  
Sbjct: 116 YATKPAIKGRKPNFIYFGGGTPSYLSVDQLKHLTDGMKALLPWDEVEEVAFEAEPGTLTD 175

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +  +  R  GV R+SLGV++ ++  L   GR H++ E   A   AR+  FP+++ DLI  
Sbjct: 176 HKLKAIRDMGVTRLSLGVENFDDHILEINGRAHHSKEIARAYSYARSLGFPQINIDLIAG 235

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK-DGDLVLPSENVAVDLYN 237
           + ++T   W   +++ +  A D +++Y++ I   T  YK  K +G LV P  +       
Sbjct: 236 MVEETDANWRENVRKTIEMAPDSVTIYEMEIPYNTTIYKQMKAEGKLVAPVADWETKRRW 295

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESL----HNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
           +  +      +     S ++ +         +    W   D + +G  +   +    ++ 
Sbjct: 296 VHYAFAELEKVGYTVTSAYTAIRNPERTKFVYRDRLWAGADLLSLGVASFGHINGTHYQN 355

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
               +     ++  V +    V      + +++     ++ L+L   +S   +    G +
Sbjct: 356 HHDFDP----YVARVNQGELPVYRALTPADDERYIREFILQLKLGH-VSRNYFTSKFGTD 410

Query: 354 LDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                 + LQ     GF+  ++  R+   + G+  +D ++    +
Sbjct: 411 PSERFAQPLQTLKDWGFLS-IEGDRILINREGLLQVDRLLHEFFL 454


>gi|162419089|ref|YP_001605236.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|162351904|gb|ABX85852.1| radical SAM domain/HemN domain protein [Yersinia pestis Angola]
          Length = 414

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 88/380 (23%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +     E +    L E  M+    L     I +I+FGG
Sbjct: 33  LYLHIPFCATHCTFCGFYQNPLQ-SGSTERYTDYLLRELSMEADSPLLQGGPIHAIYFGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+GVQ
Sbjct: 92  GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGVQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 152 TFNTRIRQRMGRKADRDQAIRFLTDLATRDRAAVVCDLMFGLPHQTPEIWQEDLAIVRQL 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 212 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 271

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      ++
Sbjct: 272 RTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRLIDSGQKPLM 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQF 373
                S E           +L+ GI V     L+    D      L  Q +   + +   
Sbjct: 328 MMTQASGEHPWR------AKLQSGIEVGRL-DLSELIADPYPLMPLISQWYQSNLLKDNS 380

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 381 FCLRLTDSGRFWASNIMQAL 400


>gi|332673512|gb|AEE70329.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 83]
          Length = 457

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 135/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAQLRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHRYEKALDLGHLPVERGVILTKEDILRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +      + L++
Sbjct: 394 FSVDFKAHFRKELEK 408


>gi|281355315|ref|ZP_06241809.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
 gi|281318195|gb|EFB02215.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
          Length = 361

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 160/380 (42%), Gaps = 29/380 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y H PFC  KC YC F S         + ++     E+     L  P    +++ GGGTP
Sbjct: 4   YFHIPFCRSKCGYCAFYSEPSPDPGMFDAYLDKLERELDA-APLPPP---DTVYLGGGTP 59

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           +L +P  +  +   I +     +  EI+IEANP +V+    +  R    NRISLGVQS  
Sbjct: 60  TLFDPARLERLFCLIRQKLAPEAGTEISIEANPETVDREKIRLIRSF-ANRISLGVQSFS 118

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +  R LGR+        AI L R+  FP+ + DLIYA+P  T   +  +L  A      
Sbjct: 119 AEHRRTLGRDCTQQALHHAIDLIRDAEFPQWNIDLIYAIPGATRRDFFNDLATAARAGAP 178

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y LT E+G          D + P ++ A  L+       +      YEISN++  G
Sbjct: 179 HISCYSLTPEEGARL------CDRLQPDDDEAAALWEEIPQQLAPWEFRRYEISNYALPG 232

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            E  HN+N WR G   G GP A S      +  A S+ +    WL        A  E + 
Sbjct: 233 HECRHNVNVWRGGLLRGFGPAAASFDGALRYAQAASLTE----WLAG------APPELDE 282

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE------RVQFS 374
           +    + +E   + LR   G +   W  + G +      R L R    E       +   
Sbjct: 283 IPGAARLNEIFAVNLRTASGWTPHLWSRVPGADGWEARLR-LARSAAKETSPEFFDISPG 341

Query: 375 RLRCTQRGMTMLDSVIANLA 394
           R+  +  G+   +++   L 
Sbjct: 342 RITLSSSGLLFWNTIAEVLL 361


>gi|224438403|ref|ZP_03659330.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313144844|ref|ZP_07807037.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313129875|gb|EFR47492.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
          Length = 457

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 141/378 (37%), Gaps = 22/378 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            L +Y H PFC   C +C  N      +  +E +I     E+  ++  +   R +    F
Sbjct: 51  PLSLYTHLPFCRSACYFCGCNVVYTSKEEKKERYIHYLKKELALLKDSMDTSREVVQFHF 110

Query: 77  GGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+    + +  ++  I       + N E++ E +P           ++ G NR+S 
Sbjct: 111 GGGTPTFFNAKELESVIGLIRGVFTNFAKNAEVSCEVDPRFFSREQMAVLKENGFNRLSF 170

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +E+    + R  +      AI LAR      ++FDLIY LP Q+   +   LQ+ 
Sbjct: 171 GVQDFDERVQEAIHRIQSVEIVSNAIALAREFGTESVNFDLIYGLPYQSEQSFADTLQKV 230

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +    D L+++        +   M K  +  LP+    +++   T +     G     + 
Sbjct: 231 VGLKPDRLAIFNYAHLP-WMKKTMRKIDETTLPNPAQKLEILKNTIAFLQEQGYMMIGMD 289

Query: 255 NHSF-------LGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +          A++    N+  Y        IGIG  + S       R      K  +
Sbjct: 290 HFAKKSDELYLAKAKNELRRNFQGYTTRGFSQTIGIGLTSIS----EGLRYYSQNYKDMQ 345

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            + K + +    V     LS +    + ++MGL     +  K  E   G          L
Sbjct: 346 EYEKALDEGRLPVERGVKLSEKDILRKEVIMGLMNNLRLDFKGIEKRFGIEFRAYFANEL 405

Query: 363 QRQGFIERVQFSRLRCTQ 380
           +     E  +   ++ T 
Sbjct: 406 ES--LREYEELGLIQITP 421


>gi|160882833|ref|ZP_02063836.1| hypothetical protein BACOVA_00795 [Bacteroides ovatus ATCC 8483]
 gi|156111697|gb|EDO13442.1| hypothetical protein BACOVA_00795 [Bacteroides ovatus ATCC 8483]
          Length = 425

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 92/403 (22%), Positives = 156/403 (38%), Gaps = 31/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LVPYLKQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT   +  S   GGGTP L+    +  +LD  A      S+   ++E +P   +     
Sbjct: 87  PLTTGLAFDSFAIGGGTPLLLTVPQLEYLLDTAALFGVHPSHTFTSVETSPEYADPARLD 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV R+S+GVQS  ++ L  L R         A+   R   FP  + DLIY +  Q
Sbjct: 147 LLKQAGVARVSIGVQSFLDEELTALKRRPRRDMINQALEAIRKRQFPFFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L +   T   +           ++V   +Y     +
Sbjct: 207 TVASFLYSLEQALLFQPNELFIYPLYVRPETAITERES--------DDVCFQMYCAACDL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS------ 296
               G    + S   F+   S            +  G G  S +    +    +      
Sbjct: 259 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVCQRCI 316

Query: 297 ---IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
              I+ +  +    V +NG        LS E+Q   F++  L    G+   ++E   G +
Sbjct: 317 AGEIDDYMGTTDFTVARNGF------ILSQEEQRQRFIIKNLMYYMGLDKAEYERRFGES 370

Query: 354 LD-IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            D +   R L  + +IE     R+  T  GM   D +   L +
Sbjct: 371 PDNVPLFRQLAERQWIEDTDNGRICLTSDGMAYSDYI-GQLFI 412


>gi|315586655|gb|ADU41036.1| coproporphyrinogen dehydrogenase [Helicobacter pylori 35A]
          Length = 457

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 136/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVVLTKEDALRKEVIMQMMSNLKLDYSKIEER 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|262199677|ref|YP_003270886.1| coproporphyrinogen dehydrogenase [Haliangium ochraceum DSM 14365]
 gi|262083024|gb|ACY18993.1| Coproporphyrinogen dehydrogenase [Haliangium ochraceum DSM 14365]
          Length = 431

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 176/378 (46%), Gaps = 15/378 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQ--LTGPRSISS 73
            L +Y+H P+CV++C YC + + +      V  + ++ +   E++   +    G R + S
Sbjct: 41  PLNLYIHTPYCVQRCAYCHYKTAILGEHRRVEIDRYVAAVCREIELACERLHVGERPVVS 100

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTP+L+   N++ +++ +  N+ +  + EITIE+ P ++        R+ GVNR 
Sbjct: 101 LYFGGGTPTLLSSDNLSHLMECVRANFAL-QDAEITIESGPVTLTERKATLLRELGVNRF 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLG+QS  +  +   GR     +A+ AI LA+++   ++ DL+  L  +T   W   L++
Sbjct: 160 SLGIQSFSDDIVAQTGRVDTEEQALEAIALAKDMGAVVNIDLLSGLAGETEESWARSLEQ 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           AL+  V  LS+Y++ +   T +Y   +  +LVLP++   +       +  +  G      
Sbjct: 220 ALAVDVHTLSIYKMELYANTGYYDALRKDELVLPTDEQELGFIRTAIARLATAGYLPVNF 279

Query: 254 SNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
                 G  +  NL   WR GD    G  A   + V S++   S+E+    +L+ V    
Sbjct: 280 FTFGKGGGFAPRNLRSKWRGGDTAAFGLSAFGSLGVHSYQNTNSMER----YLERVESGE 335

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIE 369
                   LSS       +++G++L   I    +    G +L     E    L  +G +E
Sbjct: 336 LPAQRGYRLSSRDLMVRDVVLGMKLLY-IERDAFREAHGFDLPALIPEAVSGLVSKGLLE 394

Query: 370 RVQFSRLRCTQRGMTMLD 387
            +   R+  +  GM   D
Sbjct: 395 -ISDERIALSDEGMVWGD 411


>gi|150025235|ref|YP_001296061.1| coproporphyrinogen III oxidase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771776|emb|CAL43250.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Flavobacterium psychrophilum JIP02/86]
          Length = 454

 Score =  235 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 74/408 (18%), Positives = 161/408 (39%), Gaps = 23/408 (5%)

Query: 3   YLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +++  + +         + +Y+H PFC   C +C  N  + +    ++ +I++ L E  +
Sbjct: 35  WINTLKKSFAESNKLEGISLYIHLPFCESLCTFCGCNKRITKNHTVEKTYIEAVLKEWSF 94

Query: 62  MRQLTGPRSI-SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++  P+ I   I  GGGTP+    +N+  +++GI  + + + N E + E +P++    
Sbjct: 95  YCKILEPKPIIKEIHLGGGTPTFFSAENLESLINGIFCHASKAENYEFSFEGHPNNTTRE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           + Q     G  R+S GVQ   ++  + + R             AR I    +  DLI+ L
Sbjct: 155 HLQILYDLGFRRVSFGVQDYSDKVQKAIHRVQPFQNVAKVTLWAREIGYTSIGHDLIFGL 214

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q +      +++  S   D L+ Y                 D  +P ++    LY + 
Sbjct: 215 PFQELDDVVDTIEKTKSLLPDRLAFYSYAHVPWIKGNGQRGFKDEDVPKDDAKRKLYEVG 274

Query: 240 QSITSAHGLHAYEISNHS------FLGAES--LHNLNYWRY-----GDYIGIGPGAHSRV 286
           +     +G H   + + +      +   E+  LH  N+  Y        IG+G  + S  
Sbjct: 275 KQSLYKNGYHEIGMDHFALKTDGLYAAFENGKLHR-NFMGYSASKTQLMIGLGVSSIS-- 331

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
              S        K  E++ + +  +   ++   FL++E       ++ L  +   S ++ 
Sbjct: 332 --DSWYSFAQNVKDIETYYQRLESDKLPILRGHFLTNEDLIIRKHILNLMCQFKTSWQNK 389

Query: 347 EMLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                   ++      +++ GF+  +  + +  T+ G   + ++    
Sbjct: 390 SDYFEELPEVLLQLVEMEKDGFL-IINENTIEVTEAGKPYVRNICMAF 436


>gi|269302677|gb|ACZ32777.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pneumoniae LPCoLN]
          Length = 458

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 93/403 (23%), Positives = 166/403 (41%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
            +    L +Y H PFC   C YC  +  + R +   E +I + + EM+ + +  G R  +
Sbjct: 44  RENPQPLSLYFHIPFCQSMCLYCGCSVVLNRREDIVEAYINTLIQEMKLVVETIGFRPQV 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +  +   L+ D I K + +S   EI IE +P S+  ++     ++  G
Sbjct: 104 SRIHFGGGTPSRLSRELFTLLFDHIHKLFDLSHAEEIAIEVDPRSLRNDMEKADFFQNVG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +      + R  +  E++ A    +   F  ++ DLIY LPKQT   + 
Sbjct: 164 FNRVSLGVQDTQADVQEAVRRRQSHEESLKAYEKFKELGFQSINIDLIYGLPKQTKESFS 223

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +Q  L+   D L+L+        +           +PS      +Y+ ++ + +  G 
Sbjct: 224 KTIQDILAMYPDRLALFSFASVP-WIKPHQKAMKASDMPSMEEKFAIYSQSRHLLTKAGY 282

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +  N     N+  Y      D +G+G  + S +      + + 
Sbjct: 283 QAIGMDHFSLPHDPLTLAFKNKTLIRNFQGYSLPPEEDLLGLGMTSTSFI----RGIYLQ 338

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K  E +   V +   A V+ + L+ + +  ++ +  L     I+ +++  L G   D 
Sbjct: 339 NAKTLEEYHNTVLRGTFATVKSKILTEDDRIRKWAIHKLMCTFTINKEEFYNLFGYEFDT 398

Query: 357 ECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +  R       G I     S L+ T  G   +  +    
Sbjct: 399 YFIESRDRLISMETTGLIHNSPGS-LKVTPLGELFVRVIATAF 440


>gi|206896118|ref|YP_002247489.1| coproporphyrinogen III oxidase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738735|gb|ACI17813.1| coproporphyrinogen III oxidase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 349

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 94/350 (26%), Positives = 157/350 (44%), Gaps = 28/350 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+Y+H PFC +KCP+CD+ S     +   + F    + +++ +     P  + +++ GGG
Sbjct: 4   GLYLHIPFCYRKCPFCDYYSISNAPETWLDTFTDVIVYQLRQL-----PTKLDTLYVGGG 58

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP ++       IL        +    E TIE NP  V+  NF         R+S+GVQS
Sbjct: 59  TPLVLGQSRWERILQ------NLPEARERTIELNPEDVKKENFPLLAH--FTRLSVGVQS 110

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +  L+ LGR  +  +    + L  +    +S DL+  +P QT  +   +L   ++  V
Sbjct: 111 FSDSVLKTLGR--DKLDYEKLLDLLSH--WDVSVDLMVGVPGQTRDEVLRDLISVVALGV 166

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S+Y L + +GT F+  ++  D          DL  + +   + HG   YEISN++  
Sbjct: 167 PHISVYPLEVHEGTPFWGYYRGWDWD------DADLLLMVEKFLTEHGYEHYEISNYARP 220

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G + LHN  YW   +Y  +GP A   V    ++       +   +++  +       E  
Sbjct: 221 GHQCLHNKIYWHDEEYYALGPSAAGYVNGVRYKWVS----NLRLYVESAKLGEPTYEEYV 276

Query: 320 FLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            LS E+Q  E+ +M LR L EGI  +D E   G           +   F+
Sbjct: 277 ALSWEEQLSEYAIMNLRLLSEGIRKEDVEKRFGERAWGIILSQAEGNAFL 326


>gi|318607457|emb|CBY28955.1| radical SAM family protein HutW, similar to coproporphyrinogen III
           oxidase, oxygen-independent,associated with heme uptake
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 437

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +       +    L E+       L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQTDS-TARYTDYLLRELSMEASSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + KN  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHSIISQLRKNLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  EAI  + +LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKASRDEAIHFLTNLASRDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRIELPTLAQQCDFYCSGAENLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      ++
Sbjct: 295 HTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRLIDSGQKPLM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW---EMLAGRNLDIECERNLQRQGFIERVQF 373
                S E           +L+ GI V      E++    L +       +   ++   F
Sbjct: 351 IMTQASGEHPWR------AKLQSGIEVGRLDLSELITDPYLLMPLIAQWHQSHLLKDDSF 404

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 405 -CLRLTDSGRFWASNIMQAL 423


>gi|295133760|ref|YP_003584436.1| coproporphyrinogen III oxidase [Zunongwangia profunda SM-A87]
 gi|294981775|gb|ADF52240.1| coproporphyrinogen III oxidase [Zunongwangia profunda SM-A87]
          Length = 452

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 75/407 (18%), Positives = 148/407 (36%), Gaps = 20/407 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++    + +      N + +Y+H P+C   C +C  N  + +  + +  +I+S L E   
Sbjct: 33  EWKECLKRSYVESKHNGISLYIHLPYCESMCTFCGCNKRITKNHLVEIPYIKSLLIEWDL 92

Query: 62  MRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              L      IS +  GGGTP+    +N+ L++ G+ K+    +N +++ E +P++    
Sbjct: 93  YVSLFEETPKISELHIGGGTPTFFSSENLQLLIAGLFKDPKDRANAKLSFEGHPNNTSHK 152

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           +       G  R+S GVQ    +  + + R            LAR      +  D+I+ L
Sbjct: 153 HLDVLANLGFTRVSYGVQDYNLKVQKAINRVQPFENVQKVTTLARQAGYTSIGHDIIFGL 212

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    E  +        + ++ Y                 D  LP+       + L 
Sbjct: 213 PFQTTADIENTINLTKKLRPERIAFYSYAHVPWIKGNGQRGFKDEDLPTAEEKRAQFELG 272

Query: 240 QSITSAHGLHAYEISNHSFLG---AESLH----NLNYWRYGD-----YIGIGPGAHSRVK 287
           +      G     + + +      A+SL     + N+  Y        +G+G  A     
Sbjct: 273 KKRLLESGYIEIGMDHFALPQDELAQSLKQKTIHRNFMGYTTTTTQLMVGLGVSAIG--- 329

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
             S        K+ E +  ++      +     LS E       ++ L  +   S +D  
Sbjct: 330 -DSWYAFGQNVKNIEEYNNLIEGGIFPIYRGHILSPEDLIIRKHILNLMCKLETSWEDNN 388

Query: 348 MLAGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           M      DI      +Q  G ++ +  +++  T++G   + +V    
Sbjct: 389 MQFPELPDIIIKLSEMQDDGLLKIL-HNKIEITEKGRAFVRNVCMAF 434


>gi|29840636|ref|NP_829742.1| coproporphyrinogen III oxidase [Chlamydophila caviae GPIC]
 gi|29834986|gb|AAP05620.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           caviae GPIC]
          Length = 458

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 92/403 (22%), Positives = 159/403 (39%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
            +    L +Y H PFC   C YC  +  + R +   E +I + + EM+ +  L G  R  
Sbjct: 44  REDDRPLSLYFHIPFCQSMCLYCGCSVVINRREDIVEEYIATLIKEMELVHTLLGGKRKT 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +       +   I + + +S   EI IE +P S+  +    +  +  G
Sbjct: 104 SRIHFGGGTPSRLSRALFEKLFFHIHRLFDLSEVEEIAIEFDPRSLRNDSEKAEFIQSLG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +      + R  +  E++ A        F  ++ DLIY LPKQT   + 
Sbjct: 164 FNRVSLGVQDTQAAVQEAVRRRQSHEESLHAYEKFRALGFESINIDLIYGLPKQTKATFT 223

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +   L    D L+L+        +        +  +PS      +Y+  +   +  G 
Sbjct: 224 QTIADILQMRPDRLALFSFASVP-WIKPHQKAMKESDMPSMEEKFAIYSYARHKLTKSGY 282

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +  N     N+  Y      D IG+G  + S +      V + 
Sbjct: 283 QAIGLDHFSLPEDPLSIAFKNKTLIRNFQGYSLPPEEDLIGLGMTSTSFI----RGVYLQ 338

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K  ES+   +     A ++ + LS + +  ++++  L     +S +++  L G   D 
Sbjct: 339 NAKTLESYHNHILAGSPATIKSKILSEDDRIRKWVIHKLMCTFVVSKEEFSDLFGYRFDE 398

Query: 357 ECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
               + +R       G I +   S L  T  G   +  +    
Sbjct: 399 YFCESQERIDSMATTGLI-QNSSSFLTVTPLGELFVRVIATAF 440


>gi|290978991|ref|XP_002672218.1| predicted protein [Naegleria gruberi]
 gi|284085793|gb|EFC39474.1| predicted protein [Naegleria gruberi]
          Length = 382

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 126/353 (35%), Positives = 196/353 (55%), Gaps = 28/353 (7%)

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYR 126
             + S+FFGGGTPS + P  +  I+    + +       VEI++EANP+S+E    + + 
Sbjct: 29  YELVSVFFGGGTPSTMHPLAMEKIISHGLEMFGKSREDGVEISMEANPTSIEYGKLKDFH 88

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYAL--PKQ 182
           +AG+NR+S+GVQS + + L+ LGR H+  +A+ AI +ARN F    +S DL++ L   K 
Sbjct: 89  RAGINRVSIGVQSFDSECLKSLGREHSIEDALNAIDIARNTFGEDSISIDLMFGLAQHKN 148

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             + W+  L +ALS  + HLSLYQLTIEKGT F+++  + +  LP+E  +  LY  T   
Sbjct: 149 NPSIWKNSLAKALSLNLSHLSLYQLTIEKGTKFHRL-FNVEKDLPNEEESSHLYEFTIEE 207

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIEK-- 299
              HGL  YE+SN +  G E  HN+ YW+   D+IG+GPGAH R+   + R   S  +  
Sbjct: 208 CKKHGLEMYEVSNFAKPGKECKHNIMYWKSIHDFIGVGPGAHGRLTNHNTRERFSTIQVM 267

Query: 300 HPESWLKMVRKNGHAV---------VEKEFLSSEQQADEFLMMGLRL-REGISVKDWEML 349
            PE W++ V    + +         +++E L+ EQQ +E  MMGLR+ +EG+S      +
Sbjct: 268 RPEDWIEQVDNQLNHIHKPSLLFGDIKEEKLTEEQQIEELFMMGLRMPKEGVSESSLRAI 327

Query: 350 -----AGRNLDIECERNLQRQG---FIERVQFSRLRCTQRGMTMLDSVIANLA 394
                  + L+    + L+  G    I+     R+  T  G+++LD +IANL 
Sbjct: 328 NPELSFEKLLNANMIKQLENHGYIKLIKEENDKRIVATMSGISVLDILIANLL 380


>gi|188527486|ref|YP_001910173.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
 gi|188143726|gb|ACD48143.1| coproporphyrinogen III oxidase [Helicobacter pylori Shi470]
          Length = 457

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYIALQKAQLRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|282880050|ref|ZP_06288772.1| coproporphyrinogen dehydrogenase [Prevotella timonensis CRIS 5C-B1]
 gi|281306164|gb|EFA98202.1| coproporphyrinogen dehydrogenase [Prevotella timonensis CRIS 5C-B1]
          Length = 456

 Score =  235 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 81/416 (19%), Positives = 165/416 (39%), Gaps = 30/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YLSA E +        +  Y+H PFC   C YC  NS+    +  ++ ++ +   E+  
Sbjct: 32  QYLSAIEASNHHAHQPLVSFYLHIPFCRHLCHYCGCNSYPMANQDMRKRYVDALHQEIDL 91

Query: 62  MRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +        R IS I +GGG+P+ +   ++  + + +       ++ EI IE +P  +  
Sbjct: 92  IASHLDTQNRQISQIHYGGGSPTALPIADLKSLNEHLRSLMPTIAHPEIAIECHPGYLAE 151

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            +++   + G NR SLG+Q  +E  L+ + R  +       +HL R     ++ DL++ L
Sbjct: 152 GDWEALAQCGFNRYSLGIQDFDEHVLKAVNRRPSLLPVEEIMHLLRQQGATVNMDLLFGL 211

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +    ++A +   D +  +        +  +      L LP +    ++Y   
Sbjct: 212 PYQTPDSFARAAEQAANLHPDRIVTFSYGHVP-WVHKRQLILEKLGLPQDEDKQEMYRRA 270

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY------GDYIGIGPGAHSRV 286
             +    G  +  + +      E          + N+  Y      G     G  A S++
Sbjct: 271 AEVLHTAGYRSIGMDHFVLPTDELSVALETKQLHRNFQGYCTRRTTGQVYAFGVTAISQL 330

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    +      +  E +++ +            L++++Q    ++  +      S K+ 
Sbjct: 331 QTAYAQNG----RDIEEYIRCIEAGKPYTYRGYELTTQEQMVREVIEQMMCNYHFSWKEI 386

Query: 347 ---------EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                    E+ A  N D +  + ++  G IE  + S +  TQ G   + +V+A L
Sbjct: 387 AACLGCTPAEVKAATNYDEQKLKEMEADGLIELSEDS-ISMTQIGSPFVRNVVATL 441


>gi|15618798|ref|NP_225084.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae CWL029]
 gi|15836422|ref|NP_300946.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
 gi|16752147|ref|NP_445514.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae AR39]
 gi|33242251|ref|NP_877192.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae TW-183]
 gi|4377208|gb|AAD19027.1| Coproporphyrinogen III Oxidase [Chlamydophila pneumoniae CWL029]
 gi|7189890|gb|AAF38757.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pneumoniae AR39]
 gi|8979263|dbj|BAA99097.1| coproporphyrinogen III oxidase [Chlamydophila pneumoniae J138]
 gi|33236762|gb|AAP98849.1| oxygene-independent coproporphyrinogen III oxidase [Chlamydophila
           pneumoniae TW-183]
          Length = 458

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 93/403 (23%), Positives = 166/403 (41%), Gaps = 28/403 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
            +    L +Y H PFC   C YC  +  + R +   E +I + + EM+ + +  G R  +
Sbjct: 44  RENPQPLSLYFHIPFCQSMCLYCGCSVVLNRREDIVEAYINTLIQEMKLVVETIGFRPQV 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG 129
           S I FGGGTPS +  +   L+ D I K + +S   EI IE +P S+  ++     ++  G
Sbjct: 104 SRIHFGGGTPSRLSRELFTLLFDHIHKLFDLSHAEEIAIEVDPRSLRNDMEKADFFQNVG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWE 188
            NR+SLGVQ  +      + R  +  E++ A    +   F  ++ DLIY LPKQT   + 
Sbjct: 164 FNRVSLGVQDTQADVQEAVRRRQSHEESLKAYEKFKELAFQSINIDLIYGLPKQTKESFS 223

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +Q  L+   D L+L+        +           +PS      +Y+ ++ + +  G 
Sbjct: 224 KTIQDILAMYPDRLALFSFASVP-WIKPHQKAMKASDMPSMEEKFAIYSQSRHLLTKAGY 282

Query: 249 HAYEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAIS 296
            A  + + S        +  N     N+  Y      D +G+G  + S +      + + 
Sbjct: 283 QAIGMDHFSLPHDPLTLAFKNKTLIRNFQGYSLPPEEDLLGLGMTSTSFI----RGIYLQ 338

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K  E +   V +   A V+ + L+ + +  ++ +  L     I+ +++  L G   D 
Sbjct: 339 NAKTLEEYHNTVLRGTFATVKSKILTEDDRIRKWAIHKLMCTFTINKEEFFNLFGYEFDT 398

Query: 357 ECERNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +  R       G I     S L+ T  G   +  +    
Sbjct: 399 YFIESRDRLISMETTGLIHNSPGS-LKVTPLGELFVRVIATAF 440


>gi|210134872|ref|YP_002301311.1| coproporphyrinogen III oxidase [Helicobacter pylori P12]
 gi|210132840|gb|ACJ07831.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori P12]
          Length = 457

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 140/394 (35%), Gaps = 22/394 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYIGYLKKELALLKN 98

Query: 65  LTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
                R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMNTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILEALIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GGDYYTQNYKDLHQYEKALDLGHLPVERGVALTKEDALRKEVIMHMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
              +     ++ L++       +   L    +G 
Sbjct: 394 FSVDFKAHFKKELEK--LKPYEEAGLLVFNPKGF 425


>gi|16263144|ref|NP_435937.1| coproporphyrinogen III oxidase [Sinorhizobium meliloti 1021]
 gi|307305136|ref|ZP_07584885.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
 gi|14523808|gb|AAK65349.1| HemN coproporphyrinogen III oxidase [Sinorhizobium meliloti 1021]
 gi|46403701|gb|AAS92907.1| hypothetical protein [Sinorhizobium meliloti]
 gi|306902476|gb|EFN33071.1| oxygen-independent coproporphyrinogen III oxidase [Sinorhizobium
           meliloti BL225C]
          Length = 450

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 152/392 (38%), Gaps = 26/392 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
                  +Y+H PFC   C YC  ++ + +      +++     E+  +  +   P SI 
Sbjct: 43  APKQPASLYLHIPFCRSMCWYCGCHTTITQRDQPILDYLDMLREEVHLVSAKTRAPLSID 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTP++++P+    ++  + + +  +S  EI +E +P ++E +      +AGV R
Sbjct: 103 HVHFGGGTPTIMQPEEFRALVALLRERFEFASMTEIAVEIDPRTLEPDMATALGEAGVRR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +    + + R  +  + + A+  L ++    ++FDLIY LP QT+       
Sbjct: 163 ASLGVQSFDPVVQKAINRIQSEEQTMEAVSRLRQSGVDSINFDLIYGLPHQTVESCIATA 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A+    +  +++       +         +  L      V       +  +A G    
Sbjct: 223 EAAIRMGPERFAVFGYAHIP-SFKKHQKLIDEQALADAEGRVAQAEAIAATLAAAGYRRI 281

Query: 252 EISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +          A    + N+  Y        IG+G  A  R   G  +  +    
Sbjct: 282 GLDHFALPDDSLAIAQASGRLHRNFQGYTTDACETLIGLGASAIGRTNDGYVQNEVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC- 358
            P  + + +     A V+   ++ E +    ++  L    G+ V       G + ++   
Sbjct: 339 -PGLYAQHIASGRLATVKGYRMTPEDRLRAGIIERLMCDFGVDVPALATAHGFDPEMLLR 397

Query: 359 ----ERNLQRQGFIERVQFSRLRCTQRGMTML 386
                  L+  G I  +    +R  + G   L
Sbjct: 398 GNTRLAMLESDG-ILDIADGVIRL-REGRRFL 427


>gi|319777803|ref|YP_004134233.1| oxygen-independent coproporphyrinogen iii oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317171522|gb|ADV15059.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 449

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 74/410 (18%), Positives = 162/410 (39%), Gaps = 31/410 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A EN       + + +Y+H P+C + C +C  ++   R+      +++S   E+  +
Sbjct: 37  WLEALEN------GDEISLYLHIPYCDRLCWFCACHTKQTRHYEPVTAYLRSLHAEIATV 90

Query: 63  RQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            ++ G ++ + ++ FGGG+P++++ +++ ++   +  ++    + +I++E +P+ ++   
Sbjct: 91  ARIVGGKAGVRAVHFGGGSPTMLKSEDMVVLGKALRSSFDFLPDAKISVEIDPNDMDDAR 150

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
                + G+ R SLGVQ  + +  + + R  +  +  A I   R+     ++ DL+Y LP
Sbjct: 151 LDALAEIGMTRASLGVQDFDLKVQKAINREQSFLQTKAVIDGVRSRGVESVNLDLLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT       + +AL+   D ++L+         F K     D   LP     +    L 
Sbjct: 211 HQTRESVSSTVAQALTLEPDRMALFGYAHVP--WFKKHQTMIDEAWLPGPAQRLAQSQLA 268

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
             +    G       + +                 N+  Y +      IG+GP + S+ +
Sbjct: 269 ACLMLNAGYEPVGFDHFAKPNDALAVAARTGCLRRNFQGYTEDRCETLIGLGPSSISQFR 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +   S  +    + +MV   G A V    LS + +   +++  L      S  +  
Sbjct: 329 QGYVQNMPSNTE----YGRMVSDGGLAAVRGIALSDDDRVRGWIIERLMCDFAFSAIELV 384

Query: 348 MLAGRNLDIECERN----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G+       +     L     +  +   R          + S+ A  
Sbjct: 385 ERFGKAGQRLLLKASSTVLHDPARLLELDGDRFVVPAESRPFVRSIAAKF 434


>gi|332159987|ref|YP_004296564.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664217|gb|ADZ40861.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862384|emb|CBX72543.1| hypothetical protein YEW_HJ33030 [Yersinia enterocolitica W22703]
          Length = 437

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +       +    L E+       L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQTDSTV-RYTDYLLRELSMEASSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + KN  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHSIISQLRKNLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  EAI  + +LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKASRDEAIHFLTNLASRDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRIELPTLAQQCDFYCSGAENLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      ++
Sbjct: 295 HTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRLIDSGQKPLM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW---EMLAGRNLDIECERNLQRQGFIERVQF 373
                S E           +L+ GI V      E++    L +       +   ++   F
Sbjct: 351 IMTQASGEHPWR------AKLQSGIEVGRLDLSELITDPYLLMPLIAQWHQSHLLKDDSF 404

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 405 -CLRLTDSGRFWASNIMQAL 423


>gi|282866088|ref|ZP_06275136.1| Coproporphyrinogen dehydrogenase [Streptomyces sp. ACTE]
 gi|282559127|gb|EFB64681.1| Coproporphyrinogen dehydrogenase [Streptomyces sp. ACTE]
          Length = 448

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 81/397 (20%), Positives = 153/397 (38%), Gaps = 14/397 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R   G   P
Sbjct: 38  ADEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDEEP 97

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K        V +++E +PS+   +       
Sbjct: 98  VRFAAAAFGGGTPTFLTAGELERLCDITEKRMGADLRAVPLSVETSPSTATADRLAVLAD 157

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+S+GVQS  +   R   R  + SE   A+   R+   P ++ DLIY +  QT   
Sbjct: 158 RGATRVSIGVQSFVDAEARAAVRPQHRSEVEDALGRIRDARIPVLNIDLIYGIDGQTEES 217

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSA 245
           W   L  AL++  + L LY L +   T   +     D      +   + LY   +    A
Sbjct: 218 WRFSLDAALAWRPEELYLYPLYVRPLTGLGRHRTAADAPDHAWDEQRLRLYRAGRDHLLA 277

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIE-KHPES 303
           HG     +      G       +Y    D  IG+G GA S      +    ++E +    
Sbjct: 278 HGYEQVSMRMFRRAGVPQAGPEDYACQTDGMIGLGCGARSYTSSLHYSFDYAVEMREIRG 337

Query: 304 WLK--MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--- 358
            +      ++        +++ ++     L+  L   EG+   D+    G +   +    
Sbjct: 338 IIDGFTATEDFSRAEVGRYVTGDEARRRHLLQSLLQAEGLVSADYRERFGTDPRADFPSE 397

Query: 359 ERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
                 +G+++      RLR +  G+   D++   L 
Sbjct: 398 LDRFAERGWLDGSADPGRLRLSPEGLAHSDALGPELF 434


>gi|89055735|ref|YP_511186.1| coproporphyrinogen III oxidase [Jannaschia sp. CCS1]
 gi|88865284|gb|ABD56161.1| oxygen-independent coproporphyrinogen III oxidase [Jannaschia sp.
           CCS1]
          Length = 480

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 134/391 (34%), Gaps = 25/391 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-S 72
             ++ + +Y+H PFC + C YC  N  +        ++ Q+   E+         R + S
Sbjct: 73  DPADPISLYLHVPFCRQMCWYCGCNMKLAAKYAPVASYAQTLRKELALTADALPGRMVVS 132

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+ +   ++   +D +   +  +   EI IE++P ++  +        G  R
Sbjct: 133 HLHWGGGTPTALSSDDLEAAMDAVRARFDFAPEAEIAIESDPRTLTADMAARIGAMGFTR 192

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMEL 191
            S GVQ  + Q  + + R        A++   R    R ++FDLIY LP QT+      +
Sbjct: 193 ASFGVQEFDPQVQKAINRVQPPEMVAASVTQLRAGGVRGINFDLIYGLPLQTVESLVETV 252

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +   +   D ++L+        +        D  LP                 A G  A 
Sbjct: 253 KLCAAMRPDRVALFGYAHVP-WMAKNQRMIADDTLPDAAARSAQAEAAADALRAEGYVAI 311

Query: 252 EISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +    +            N+  Y        IG+G  +  R   G  +       
Sbjct: 312 GLDHFARPDDDLTIAAQTGKLRRNFQGYTTDQAETMIGLGATSIGRTPSGYVQNITET-- 369

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-----L 354
              +W + V      V +      E +    ++  L     +                  
Sbjct: 370 --GAWARAVEAGHLPVAKGLPFRGEDRLRAEVIERLMCDGWVDADAIGRRHNAPDGWWKE 427

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
             +  R ++  G +  +   ++  T RG  +
Sbjct: 428 ATDTLREMEGDGLLT-LSNGKVVLTARGRPL 457


>gi|254460125|ref|ZP_05073541.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacterales
           bacterium HTCC2083]
 gi|206676714|gb|EDZ41201.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 451

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 79/370 (21%), Positives = 153/370 (41%), Gaps = 27/370 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           MK+L++ E      G+ ++ +Y+H PFC + C +C   +         + ++   L E+ 
Sbjct: 39  MKWLTSVE------GNETVSIYIHIPFCKRLCWFCACRTQGTTTLRPVDAYVDILLKEIA 92

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +R +L    ++  +  GGGTP+++ P+ + ++LD +   + ++ + E+++E +P+    
Sbjct: 93  TVRAKLPDGITMGRLHLGGGTPTILSPETMTILLDKVFGAFAITEDFELSVEIDPTEASD 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYA 178
              Q     G+NR S+GVQ    +    +GR     +    +   RN   + ++ DL+Y 
Sbjct: 153 ELLQTLIDFGMNRASIGVQDFAPKVQDAIGRLQTLEQTNDVVKFLRNAGLKAINLDLLYG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT   +   L   +S   D L++Y        +  +        LP      +L  +
Sbjct: 213 LPFQTRASFRETLAHVISMDPDRLAIYGYAHVP-WMSKRQVLIKSETLPDTIERYELAAI 271

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHN--------LNYWRYGD-----YIGIGPGAHSR 285
              +  + G  A  I + +    +SL+          N+  Y D      IG G  A S 
Sbjct: 272 ANDLLLSVGYKAIGIDHFAKPT-DSLYTADRTGQLKRNFQGYTDDQNKTLIGFGASAISH 330

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  + A++      ++   V  NG A  +   +S   +    ++  L  R     KD
Sbjct: 331 FSDGYQQNAVATS----AYQDRVLTNGVAAHKGYEMSDNDKLIAAMIEELMCRFSYPTKD 386

Query: 346 WEMLAGRNLD 355
                 ++ D
Sbjct: 387 LRASFPKSED 396


>gi|238752394|ref|ZP_04613872.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
 gi|238709435|gb|EEQ01675.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
          Length = 414

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT--EMQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  + +     +    L    M+    L     I +I+FGG
Sbjct: 33  LYLHIPFCATHCTFCGFYQNPLQPES-TARYTDYLLQELNMEAASPLLQGGPIHAIYFGG 91

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  I+  + +N  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 92  GTPSALSAEQLHRIISQLRQNLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 151

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LAR     +  DL++ LP QT   W+ +L      
Sbjct: 152 TFNTRIRQRMGRKADRDQAIRFLTDLARRDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 212 PLDGVDLYALNLLPTTPLAKSVENNRVELPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 271

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ + +      ++
Sbjct: 272 RTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRSIDSGQKPLM 327

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW---EMLAGRNLDIECERNLQRQGFIERVQF 373
                S E           +L+ GI V      E++   N  +       +   ++   F
Sbjct: 328 MMTQTSGEHPWR------AKLQSGIEVGRLDLSELITNPNPLMPLIAQWHQCHLLKDNSF 381

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 382 -CLRLTDSGRFWASNMMQAL 400


>gi|318041938|ref|ZP_07973894.1| oxygen independent coprophorphyrinogen III oxidase 1 [Synechococcus
           sp. CB0101]
          Length = 453

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 74/406 (18%), Positives = 157/406 (38%), Gaps = 28/406 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWM- 62
           +     +    +  L +YVH PFC   C YC  N    +      E ++ +   E++ + 
Sbjct: 41  AELRAQLAQPTTAPLSLYVHVPFCRHACWYCGCNRITTQLGSKVVEPYLAALAKELELIS 100

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             +   R ++ + +GGGTP+ +       +   I +++ +  ++E +IE NP  +  +  
Sbjct: 101 AAMPQRRRLAQLHWGGGTPNYLNADETRQLWQLIERHFDLEPDLEASIEVNPEFLSRDAA 160

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
              R  G NRIS G+Q  + +  + + R     +    +   R   F  ++ DLI  LP 
Sbjct: 161 LQLRALGFNRISFGIQDADPEVQKAVNRVVPVEQLRRVMGWLREASFASVNVDLICGLPL 220

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT  ++   L+       D +SL+              K     LPS+   + +    Q 
Sbjct: 221 QTPDRFRTTLELVQELRPDRISLFSFAYLPE-QLPLQRKIAADDLPSQRERIVMLEDAQR 279

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVG 289
           +  + G  A  + +++  G            + N+  Y      + +G+GP A S+    
Sbjct: 280 LLCSAGYEAIGMDHYALAGDSLAAAARSGRLHRNFQGYTTGGELELLGVGPTAISQFPHL 339

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF-LMMGLRLREGISVKDWEM 348
             +     E+  +++   + +    V     +   +  +   L+  +     + ++    
Sbjct: 340 FAQN----ERDLKAYTAALAEGHLPVERGLVVRDPEVLERRELIRQVMCTFSLELE---- 391

Query: 349 LAGRNLDIECERNLQRQGFIERVQF-SRLR--CTQRGMTMLDSVIA 391
           L    L+ +  + L R G ++  +   R +   T  G  ++ ++ A
Sbjct: 392 LERYALEWQQLQELARDGLVKLSEHSGRGQATVTTEGRWLIRTIAA 437


>gi|317009319|gb|ADU79899.1| coproporphyrinogen III oxidase [Helicobacter pylori India7]
          Length = 457

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 140/375 (37%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  AAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKS 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S +VE++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPLQLDEITQSIQEVFPNFSQDVEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG    + +  G
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIG---ITSIGEG 334

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           S        K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 335 S-DYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FPVDFKAHFKKELEK 408


>gi|254475110|ref|ZP_05088496.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
 gi|214029353|gb|EEB70188.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
          Length = 451

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 145/385 (37%), Gaps = 22/385 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            + VY+H PFC + C +C   +   +     EN+I +   E+  + + +     +  + +
Sbjct: 50  PVSVYIHIPFCERLCWFCACRTQGTQTLNPVENYIATVEQELALLAETVPAGLRMGRLHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   +    T + + E ++E +P+ V+ +        G+NR S+G
Sbjct: 110 GGGTPTILPPALIHRLAKAVKAAITPADDWEFSVEIDPTLVDRDKIAALSAEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  + +    +GR        A +  L       ++ DL+Y LP Q   +    + + L
Sbjct: 170 IQDFDPEVQAAIGRTQPYEVTAACVADLRAAGIRSLNTDLVYGLPHQDAARIADTVDKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   D ++L+        +  +     +  LP +     L  +      + G     I +
Sbjct: 230 SLRPDRVALFGYAHVP-WVAKRQKLIDEAALPGDEERFALAEIAADGFRSAGFSPIGIDH 288

Query: 256 HSFLGA------ESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +  G       ++ H   N+  Y D      IG+G  + SR   G  + A +      +
Sbjct: 289 FALPGDGLEQALQTGHLRRNFQGYTDDHCPTLIGVGASSISRFADGYVQNAPAT----AA 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECER 360
           +++ V     +      L+   +     +  L     +  K+     G     L+ +   
Sbjct: 345 YVQRVEAGEFSGTRGHELTQMDRLRGRAIEMLMCDFVLDRKELASRFGALAAQLNSDIAE 404

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTM 385
             +  G +  +    L     G  +
Sbjct: 405 VAETYGDLVTLDEDSLCILPAGRPL 429


>gi|261839508|gb|ACX99273.1| coproporphyrinogen III oxidase [Helicobacter pylori 52]
          Length = 457

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 139/375 (37%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S +VE++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDVEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAQLRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVILTKEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +  +  ++ L++
Sbjct: 394 FSIDFKVHFKKELEK 408


>gi|327480442|gb|AEA83752.1| coproporphyrinogen III oxidase [Pseudomonas stutzeri DSM 4166]
          Length = 460

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/412 (18%), Positives = 151/412 (36%), Gaps = 30/412 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   Q S  L +YVH PFC   C YC  N  + + +   + +++    E++
Sbjct: 38  FDLLHALRSS--RQASRPLSLYVHLPFCANVCYYCGCNKIITKDRGRAQPYLERLEKEIE 95

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +   L   + +  + FGGGTP+ +    +  ++  + +++ +    + + +IE  P   
Sbjct: 96  LISCHLGKDQLVEQLHFGGGTPTFLSHDELRRLMKHLRQHFNLQDDDHGDFSIEVAPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +       R+ G NRIS+GVQ L+    R + R     +    I  AR + +  ++ DLI
Sbjct: 156 DWPTIGLLRELGFNRISIGVQDLDPDVQRAINRMQTLEQTRTIIEAARTLQYRSLNIDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LP QT  ++   ++  +    D LSL+         F    +     LP+    + + 
Sbjct: 216 YGLPLQTPARFAKTVEAIIDLQPDRLSLFNYAHLPE-RFAPQRRINASDLPAPAEKLAML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHS 284
             +  + +  G     + + +    E            +   Y  +G  D +G+G  A S
Sbjct: 275 EQSIHLLTDAGYRYIGMDHFALPDDELAMAQEDGSLQRNFQGYTTHGHCDLVGLGMSAIS 334

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           ++      +          +   + +   A       + +      ++  L     +S  
Sbjct: 335 QIGD----LYCQNHSDIAEYQHQLDQGQLATARGLRCNQDDLIRRDVIQALICDFELSFA 390

Query: 345 DWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             E                    +   G IE +  S L     G  ++ S+ 
Sbjct: 391 RIEHDHAIEFRHYFAEPWPMLEQMAADGLIE-ISESHLIVQPAGRLLVRSIC 441


>gi|153009960|ref|YP_001371175.1| coproporphyrinogen III oxidase [Ochrobactrum anthropi ATCC 49188]
 gi|151561848|gb|ABS15346.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           anthropi ATCC 49188]
          Length = 444

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 88/396 (22%), Positives = 155/396 (39%), Gaps = 26/396 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  ++ +       ENF  S L+E++ + + LT   ++  
Sbjct: 43  PEESVSLYIHVPYCRQLCHYCGCHAKMAVRNDVVENFCTSLLSEIETVSKSLTARPNVVH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++ P+    IL  +   +  +  +E  IE +P +V     Q     GVNR 
Sbjct: 103 LHWGGGTPSILNPRQFTSILAALRVAFDFAPEMEHAIELDPRTVTPQLVQTLALMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +  + +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDVDAEVQKAIGRIQPIETVAKAATLLREVGIDRLNFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +      D ++ Y                   +LP  +       +        G     
Sbjct: 223 KVAVLKPDRVACYGYAHLPQ-RRANQRLIDASLLPDADERFAQARVVADSFIGFGYEPVG 281

Query: 253 ISNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           I +++         A +  LH  N+  Y D      IG+GP + S+   G  +    +  
Sbjct: 282 IDHYALPDDNLAVAARNGTLHR-NFQGYTDDRCQTLIGLGPSSISQFPGGYAQNISDV-- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIE 357
             + + K V     A V    +    +    ++  L     + +       G     ++ 
Sbjct: 339 --KQYSKRVEAGDLATVRGYAMRESDRIRAGIITALMCNFRVDLN--TTAPGVEFSDELA 394

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             R L   G +E V+   +  T  G  ++  V A  
Sbjct: 395 LLRPLVADGLVE-VRSGVISATSDGKPLIRLVAAAF 429


>gi|259417595|ref|ZP_05741514.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
 gi|259346501|gb|EEW58315.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
          Length = 445

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 150/400 (37%), Gaps = 28/400 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +    + +YVH PFC + C +C   +   +       ++     E+  + R L     ++
Sbjct: 40  KPGAEISLYVHVPFCRRLCWFCACRTQGTQSDSPVRAYLDVLKQEIALLARHLPEGVRLA 99

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+L+  + +A + + I     ++   E ++E +P+ ++         AG+NR
Sbjct: 100 RLHWGGGTPTLLSAEMMAELAEAIFAVTPMAKGGEFSVEIDPNEIDEPRLDALAAAGMNR 159

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
            S+GVQ  + +    +GR         A+ + R      ++ D+++ LP QT  +    +
Sbjct: 160 ASIGVQDFDPEIQETIGRIQPFDLTRDAVDMIRARGIASLNADILFGLPHQTRMRMTESV 219

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q+ LS + D ++LY        +  + +      LPS    + L+   Q +    G    
Sbjct: 220 QKLLSLSPDRVALYGYAHVP-WMARRQNMIPTDSLPSPKARLQLFETAQRLFMWDGYREI 278

Query: 252 EISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I + +                 N+  Y D      IG+G  + SR   G  + A S   
Sbjct: 279 GIDHFATPHDGLAVAERTGKLRRNFQGYTDDRAEVLIGLGASSISRFPQGYAQNAPSTS- 337

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
              ++ K +R    +       S E      ++ GL     IS ++       ++     
Sbjct: 338 ---AYTKAIRDGQFSTARGHVFSGEDLLRGRMIEGLMCDFAISSEEILTTF--DIAPAAL 392

Query: 360 RNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
             + R         ++      +R    G  +   +  + 
Sbjct: 393 DRMYRDVSAAFPDMLDLHAGG-IRIRPEGKPLTRMIARHF 431


>gi|254466534|ref|ZP_05079945.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacterales
           bacterium Y4I]
 gi|206687442|gb|EDZ47924.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacterales
           bacterium Y4I]
          Length = 451

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 152/393 (38%), Gaps = 22/393 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFF 76
            + VY+H PFC + C +C   +   +     E++I +   E+  +  L      +  + +
Sbjct: 50  PVSVYLHIPFCERLCWFCACRTQGTQTLSPVESYIGTLEQELHLVAPLLPKGLRMGRMHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   +   +  + + E ++E +P+ V+ +      + G+NR S+G
Sbjct: 110 GGGTPTILPPHLIHRLAQAVKAVFPQTEDWEFSVEIDPTMVDRDKIAALAEEGMNRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           +Q  +    + +GR        A +   R      ++ DL+Y LP QT  +    +++ L
Sbjct: 170 IQDFDPLVQQAIGRAQPFEVTKACVEDLRAAGINSLNADLVYGLPHQTQARMADTVEKVL 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   D L+L+        +  +     +  LP +     L  L     +A G  A  I +
Sbjct: 230 SLGPDRLALFGYAHVP-WVAKRQKLIKEETLPDDLARYHLAGLAAERFAAAGFAAIGIDH 288

Query: 256 HSFLG------AESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +  G      A + H   N+  Y D      IG G  + SR   G  + A +      +
Sbjct: 289 FAKPGDGLEAAARTGHLRRNFQGYTDDTCPTLIGFGASSISRFAGGYIQNAAATP----A 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECER 360
           +++ V            +S E       +  L     +  ++     G    +LD    +
Sbjct: 345 YVQRVEAGQLTGARGHVMSQEDLLRGRAIEMLMCDFRLDREELRQRFGDLAASLDANLAQ 404

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              R G + ++    L     G  +   + ++ 
Sbjct: 405 VAARFGDLVQLDDGALEIVPEGRPLTRIIASSF 437


>gi|119384588|ref|YP_915644.1| coproporphyrinogen III oxidase [Paracoccus denitrificans PD1222]
 gi|3913822|sp|Q51676|HEMN_PARDP RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1002875|gb|AAC44513.1| ORF1 [Paracoccus denitrificans PD1222]
 gi|119374355|gb|ABL69948.1| oxygen-independent coproporphyrinogen III oxidase [Paracoccus
           denitrificans PD1222]
          Length = 451

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 155/383 (40%), Gaps = 22/383 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGG 78
            +Y+H PFC + C +C   +   +       + ++ L E+  ++  L     +S + +GG
Sbjct: 52  SLYMHVPFCRRLCWFCACRTQGTQSDEPVRAYAKALLAELDMLKSALAPGVRLSRLHWGG 111

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L+  + + L+   +   + ++   E ++E +P+ ++        +AG+NR S+GVQ
Sbjct: 112 GTPTLMPAEMMRLVAGAVLDAFPLAEGAEFSVEIDPNEIDEARMDALAEAGLNRASIGVQ 171

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             + +  + +GR  +      A+ + R+     ++ D++Y LP Q   +    +Q+ L+ 
Sbjct: 172 DFDPEIQKIIGREQSFEVTKRAVDMIRDRGIASLNADILYGLPHQDPHRIAESVQKLLAL 231

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + D ++LY        +  +        LP  +  + L+   + +  A G     I + +
Sbjct: 232 SPDRVALYGYAHVP-WMAKRQVMIPSEALPDPHGRLRLFETARELFLADGYDEIGIDHFA 290

Query: 258 FLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
             G          L   N+  Y D      +G+G  + SR   G  + A +   H    L
Sbjct: 291 RPGDGLARAQKAGLLRRNFQGYTDDRAEVLVGLGASSISRFPQGYAQNAPATGAH----L 346

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNL 362
             +R    +       S+E +    ++  L     I  +++    G    +L        
Sbjct: 347 ARIRDGRFSTTRGHAFSAEDRWRSRMIEALMCDFEIRAEEFIRDHGFDAESLSRILTPVA 406

Query: 363 QRQGFIERVQFSRLRCTQRGMTM 385
              G +     S LR T RG  +
Sbjct: 407 AHFGDMVDADASGLRITPRGRPL 429


>gi|123440721|ref|YP_001004713.1| coproporphyrinogen III oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087682|emb|CAL10465.1| putative coproporphyrinogen III oxidase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 437

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 156/380 (41%), Gaps = 19/380 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  +       +    L E+       L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQTDS-TARYTDYLLRELSMEASSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + K+  ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHSIISQLRKSLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSVGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  EAI  + +LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKASRDEAIHFLTNLASRDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRIELPTLAQQCDFYCSGAENLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      ++
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYRLIDSGQKPLM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQF 373
                S E           +L+ GI V     L+    D      L     Q  + +   
Sbjct: 351 MMTQASGEHPWR------AKLQSGIEVGRL-DLSELITDPYPLMPLIAQWHQSHLLKDDS 403

Query: 374 SRLRCTQRGMTMLDSVIANL 393
             LR T  G     +++  L
Sbjct: 404 FCLRLTDSGRFWASNIMQAL 423


>gi|56552260|ref|YP_163099.1| coproporphyrinogen III oxidase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543834|gb|AAV89988.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 453

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/405 (19%), Positives = 154/405 (38%), Gaps = 30/405 (7%)

Query: 5   SAYENNMTGQ----------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           + + N++T +            + + +Y+H PFC + C YC  ++ V R +     ++ +
Sbjct: 32  ADFRNDLTPKEHAIRIKNVAPDSRISIYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDT 91

Query: 55  FLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            + E++ +  L      I  + +GGGTPS+I  + I  ++  + + +  + ++   +E +
Sbjct: 92  LVKEIETVGNLAPNHLKIGHLSWGGGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELD 151

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MS 172
           P  ++    Q     G+NR SLGVQ       + +GR     +   AI   R      ++
Sbjct: 152 PRLLDAEFAQNLFDIGINRTSLGVQDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVN 211

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL+Y LP Q + +  +  Q  L  + D ++ +                 +  LP     
Sbjct: 212 FDLLYGLPHQGLDEIRLNCQETLRLSPDRIACFGYAHLPE-RKANQKLIDESALPQTKER 270

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYGD-----YIGIGP 280
            +   L   I   +G  A  I + +           E     N+  Y        IG+G 
Sbjct: 271 FEQAALIAEILQQNGYQAIGIDHFAKTDDLLAVAAREKKLRRNFQGYTTDNEPVLIGLGA 330

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A S          I      +++ + + + G A      +S E      ++  L     
Sbjct: 331 SAISTFSDA----YIQNIADIKNYSRAIEEQGLASFRGIDISQEDHLRGEIISALMCHFA 386

Query: 341 ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           + +  ++       +     +L+ +G I + Q +R+  T  G   
Sbjct: 387 VDLTPYDKSLSLEDEKRELSHLEEEGLI-QFQQNRIEMTDAGRPF 430


>gi|86361248|ref|YP_473135.1| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|86285350|gb|ABC94408.1| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 450

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 150/411 (36%), Gaps = 28/411 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y SA  +      +  + VY+H PFC   C YC  ++ + R      +++     E++ 
Sbjct: 34  EYASALADI---AKAGPVSVYLHVPFCRSMCWYCGCHTTITRQDAPVADYLDVMSQEIEL 90

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +         + ++ FGGGTP+++ PQ  + ++  +   +   ++  + +E +P ++   
Sbjct: 91  VSFAAGNDVPVKNVHFGGGTPTIMRPQEFSALMAKLRSAFAFEADAGVAVEIDPRTLAAP 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYAL 179
             +   + GV+R SLGVQS +      + R  +  +   A + L  +    ++FDLIY L
Sbjct: 151 MIEALAENGVDRASLGVQSFDPVVQAAINRLQSFEQTETAVVGLRSSGVSSINFDLIYGL 210

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PKQT+      ++ A     +  +++                 +  LP      +     
Sbjct: 211 PKQTVQSCIETVRLAAELRPERFAVFGYAHIPA-FKKHQRLIDESTLPDAKQRNEQAEAI 269

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G     + + +    +            N+  Y      + IG+G  A  R+ 
Sbjct: 270 AEELQKVGYQRIGLDHFALPDDQLAIAARKGAMRRNFQGYTTDDCDNLIGLGASAIGRLP 329

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +  +        + + +        +   L+ E +    ++  L       +    
Sbjct: 330 TGYMQNHVP----LGLYAERIASGVLPTAKGYLLTEEDKLRAKIIERLMCDFEADLGKLS 385

Query: 348 MLAGRNLDIECERN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +G +     ERN     L   G +  +   R+   Q    M+ +V A  
Sbjct: 386 SGSGFDSGFLVERNERLGELVADG-VVTISGERIAVFQEARFMVRAVAAAF 435


>gi|317177482|dbj|BAJ55271.1| coproporphyrinogen III oxidase [Helicobacter pylori F16]
          Length = 457

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S N+E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQNIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGAILTKEDILRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|154245691|ref|YP_001416649.1| oxygen-independent coproporphyrinogen III oxidase [Xanthobacter
           autotrophicus Py2]
 gi|154159776|gb|ABS66992.1| oxygen-independent coproporphyrinogen III oxidase [Xanthobacter
           autotrophicus Py2]
          Length = 467

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 144/386 (37%), Gaps = 25/386 (6%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + Y + +    G   +  YVH PFC + C YC   + V R +   + + +  + E+  + 
Sbjct: 44  ATYASWLAAVPGDARVSAYVHVPFCAELCLYCGCQTAVARSRAPVKAYAERLVEEIGLVA 103

Query: 64  QLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +    R  +S + FGGGTP+++  ++ A IL  + + +  + + EI IE +P  ++ +  
Sbjct: 104 RHLPGRLKLSHLHFGGGTPTMLADEDFAAILGALRETFDFAPDAEIAIEIDPRVMDADKV 163

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
               + G NR SLGVQ  +    + +GR+ +  E  A     R      ++ DL+Y LP 
Sbjct: 164 ATLAREGFNRASLGVQDFDPAVQQAIGRHQSCEETQAVADALRAAGIAALNLDLMYGLPH 223

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q        ++ AL    D ++++        +        +  LP     +    L   
Sbjct: 224 QDEASVRRTVEAALGLDPDRIAVFGYAHVP-WMKKHQALIPEDALPGAGARLAQAELVAD 282

Query: 242 ITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
           + +AHG     + + +          A      N+  Y        IG G  A   +  G
Sbjct: 283 VLAAHGYVPVGLDHFARASDAMAERAAAGTLKRNFQGYTTDDAPVLIGFGASAIGALPQG 342

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD--WE 347
             +   +       W K V      +     L+ E +    ++  L     + + +   +
Sbjct: 343 YVQNLPATP----QWHKAVEAGALPIARGIALTDEDRLRRHVIERLMCDLAVDLDEACMQ 398

Query: 348 MLAGRNL---DIECERNLQRQGFIER 370
               R     +I     L   G   R
Sbjct: 399 HGFPRGFFADEIHALEPLIADGLAWR 424


>gi|110678999|ref|YP_682006.1| coproporphyrinogen III oxidase [Roseobacter denitrificans OCh 114]
 gi|109455115|gb|ABG31320.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter
           denitrificans OCh 114]
          Length = 449

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 141/390 (36%), Gaps = 25/390 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-S 70
           T      + +Y+H PFC + C YC  N  + +       + ++   E+  + Q    R  
Sbjct: 40  TLPPEKPVSLYLHVPFCRELCWYCGCNMKLAKKDAPVAQYAKTLNREIGLLAQHLPQRMQ 99

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +S + +GGGTP+ + P ++   +D +  ++  + + E+ IE++P ++         + G 
Sbjct: 100 VSHLHWGGGTPTALVPDDLERAMDAVQASFDFTPDAELAIESDPRTLTDEMTLRIGQMGF 159

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
            R S GVQ  + +  + + R         ++  L       ++FDLIY LP QT+     
Sbjct: 160 TRASFGVQEFDPKVQKAINRIQPPDMVRHSVEGLRAAGVTGINFDLIYGLPHQTVDTLLE 219

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++  +    D ++L+        +  K     +  LP  +  +           A G  
Sbjct: 220 TIRLCVEMQPDRIALFGYAHVP-WMAKKQRLIDEAALPDGDARLQQSQAAALALVAAGYV 278

Query: 250 AYEISNHSFL-------GAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISI 297
           A  + + +           E     N+  Y        +G+G  +  R   G  +     
Sbjct: 279 AIGLDHFALPSDPMAKAAREGSLRRNFQGYTTDRAETMLGVGSTSIGRTPSGYVQNLAET 338

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-- 355
                +W + V      + +   LS +      ++  L     + +    +  G   D  
Sbjct: 339 ----GAWARAVEAGVLPIAKGVGLSKDDNLRGHVIERLMCNGEVDLDAAALQFGTPRDWY 394

Query: 356 ---IECERNLQRQGFIERVQFSRLRCTQRG 382
                    L+  G I R +  ++  T  G
Sbjct: 395 HPHEAELAILEADGLITR-RGGKITVTDHG 423


>gi|254779348|ref|YP_003057453.1| coproporphyrinogen III oxidase [Helicobacter pylori B38]
 gi|254001259|emb|CAX29236.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Helicobacter
           pylori B38]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S +VE++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSKDVEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKEGFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GGDYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDALRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|153003996|ref|YP_001378321.1| coproporphyrinogen III oxidase [Anaeromyxobacter sp. Fw109-5]
 gi|152027569|gb|ABS25337.1| oxygen-independent coproporphyrinogen III oxidase [Anaeromyxobacter
           sp. Fw109-5]
          Length = 460

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/407 (19%), Positives = 166/407 (40%), Gaps = 29/407 (7%)

Query: 6   AYENNMTGQGSN--SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-M 62
            YE ++    +    L +YVH PFC + C +C  N      +   E++++    E++   
Sbjct: 37  DYEEHLARADAEGGPLSIYVHLPFCREMCRFCGCNVIATHDRTRAESYLELLEKEVELVA 96

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           ++L   R+++ + +GGGTP+ ++ + +      +A+++  + + E  IE +P+    +  
Sbjct: 97  KRLPRRRTVTQLHWGGGTPTFLDERQLEQCHALLARHFDFAKDGEKAIEIDPAITTRSQI 156

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +   + G NRIS+GVQ  +      +GR     E    +  AR+  F  ++ DLIY LP 
Sbjct: 157 ETLARLGFNRISMGVQDFDPHVQETVGRIQGVKETAELVQAARDAGFHGVNLDLIYGLPF 216

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q+   W+  L   L    D L+++       +  ++     +  LP     V+L+     
Sbjct: 217 QSRDTWQKTLDLILQIHPDRLAVFGFAYVPWSKPHQRLLPQEA-LPKTEQRVELFLQAVE 275

Query: 242 ITSAHGLHAYEISNHS-----FLGAESLHNL--NYWRY-----GDYIGIGPGAHSRVKVG 289
             ++ G     + + +        A+    L  N+  Y      D +  G  + S +   
Sbjct: 276 AFTSGGYRLIGLDHFALESDELTRAQDAGYLYRNFQGYTVRPAADTVAFGMTSISDIGGA 335

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             + A       + W + V +    V     ++++     F++  +     + +++    
Sbjct: 336 YAQNAHK----LKDWGEKVAQGVIPVERGASVTADDVMRRFVINRVMCLLKLDLREVAEK 391

Query: 350 AG----RNLDIECER---NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            G    + ++ +  +    LQ  G +       LR T  G  ++ +V
Sbjct: 392 FGPAARKTIEADLAKGVEELQGDGLVT-FDGELLRVTPLGQLLVRNV 437


>gi|307637355|gb|ADN79805.1| Coproporphyrinogen III oxidase [Helicobacter pylori 908]
 gi|325995947|gb|ADZ51352.1| coproporphyrinogen III oxidase [Helicobacter pylori 2018]
 gi|325997541|gb|ADZ49749.1| Oxygen independent coproporphyrinogen III oxidase [Helicobacter
           pylori 2017]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILEALIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|260461753|ref|ZP_05809999.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|319785302|ref|YP_004144778.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|259032394|gb|EEW33659.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|317171190|gb|ADV14728.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 451

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 154/410 (37%), Gaps = 27/410 (6%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM- 62
            +Y+  + G    + + +Y+H PFC   C YC F + + R +    +++     E++ + 
Sbjct: 33  ESYQEWLRGLPADDPVSLYLHIPFCRSICWYCGFPTTIARNQGPILDYLAVLRDEIRLVW 92

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            Q+     ++ + FGGGTP+LI       ++  + + +    +  I +E +P +      
Sbjct: 93  EQVQQGLVVNDVHFGGGTPTLIGAAEFLAMIQLLRRRFAFRESATIAVEIDPRTFTAEIA 152

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPK 181
           +    A V+R SLGVQS +    + + R  + ++  AA+   R      ++ DLI+ LP 
Sbjct: 153 EAMGAANVSRASLGVQSFDPIVQKAINRVQSEAQTAAAVEELRRHGVSGINVDLIFGLPN 212

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+          ++   + L+++       ++           LP      +       
Sbjct: 213 QTVESCVQTAAATVAMRPNRLAVFGYAHIP-SVIKNQRLIETTALPDSVARAEQAAAVAE 271

Query: 242 ITSAHGLHAYEISNHSFL----------GAESLHNLNYW--RYGDYIGIGPGAHSRVKVG 289
              A G     + + +            G    ++L Y        IG G  A  RV  G
Sbjct: 272 TLVAAGYQEIGLDHFALPDDELTLAQTSGRLRRNSLGYSADTCKTLIGFGASAIGRVGEG 331

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +  ++     ES+ + +     A  +   L+ + +    ++  L       V      
Sbjct: 332 YVQNEVTR----ESYSRHIAAGRLATSKGYRLTDDDRVRAVIIERLMCDLQADVPAICAA 387

Query: 350 AGRN----LDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            G +    LD   ER   L   G I  ++   +R  Q    ++ +V A  
Sbjct: 388 CGFDPTRLLDSAAERLAKLAEDG-IVDIENGFIRVRQEHRFVVRAVAAAF 436


>gi|239831490|ref|ZP_04679819.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
 gi|239823757|gb|EEQ95325.1| oxygen-independent coproporphyrinogen III oxidase [Ochrobactrum
           intermedium LMG 3301]
          Length = 444

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 86/396 (21%), Positives = 156/396 (39%), Gaps = 26/396 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  ++ +       ENF  + L+E++ + + LT   ++  
Sbjct: 43  PEESVSLYIHVPYCRQLCHYCGCHAKMAVRNDVVENFCTALLSEIETVSKSLTARPNVVH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTPS++ P+    IL  +   +  S  +E  IE +P +V     +     GVNR 
Sbjct: 103 LHWGGGTPSILNPRQFTSILAALRVAFDFSPEMEHAIELDPRTVTPQLARTLSLMGVNRA 162

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++ +  + +GR         A  L R +   R++FDLIY LP QT+       +
Sbjct: 163 SLGVQDIDAEVQKAIGRIQPIETVAKAASLLREVGIDRLNFDLIYGLPLQTVETLRETCE 222

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  +   D ++ Y                   +LP  +       +        G     
Sbjct: 223 KVAALKPDRVACYGYAHLPQ-RRANQRLIDASLLPDADERFAQARVVAESFIGFGYEPVG 281

Query: 253 ISNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           I +++         A +  LH  N+  Y D      IG+GP + S+   G  +    +  
Sbjct: 282 IDHYALPDDSLAVAARNGTLHR-NFQGYTDDRCQTLIGLGPSSISQFPGGYAQNISDVT- 339

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIE 357
               + K V+    A V    +    +    ++  L     + +       G     ++ 
Sbjct: 340 ---QYSKRVQAGELATVRGYAMRESDRIRAGIITALMCNFRVDLNM--TAPGVEFSDEMA 394

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             R L   G +E ++   +  T  G  ++  V A  
Sbjct: 395 LLRPLVADGLVE-IRGGVISATSDGKPLIRLVAAAF 429


>gi|15645289|ref|NP_207459.1| coproporphyrinogen III oxidase [Helicobacter pylori 26695]
 gi|3122198|sp|O25376|HEMN_HELPY RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|2313787|gb|AAD07727.1| oxygen-independent coproporphyrinogen III oxidase (hemN)
           [Helicobacter pylori 26695]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSKDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSLRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GGDYYTQNYKDLHHYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSVDFKAHFKKELEK 408


>gi|317178972|dbj|BAJ56760.1| coproporphyrinogen III oxidase [Helicobacter pylori F30]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 139/375 (37%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  + ++I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTHYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGAILTKEDILRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|189911761|ref|YP_001963316.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167776437|gb|ABZ94738.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
          Length = 390

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 172/369 (46%), Gaps = 24/369 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPR 69
           +++LGVYVH+P+C+KKC YCDF S         +       +       +    +L   R
Sbjct: 14  NSTLGVYVHFPYCLKKCDYCDFYSEGIGSGPANDESTLFSAYQSEVSERISHFPKL-RER 72

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++ ++FFGGGTPS    +     L+ +   ++ + + EI+IE NP  +  +    Y K G
Sbjct: 73  TVDTVFFGGGTPSKASTKLWKQFLEFLRSEFSFADDTEISIEVNPEDLSPDLLDEYAKIG 132

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           +NR+++GVQ+L  + L FLGR+++  +  + +  L  +   R+  DL+Y +P    + + 
Sbjct: 133 INRVNVGVQTLHPEGLSFLGRHYDKGKYTSLVTTLTHSPIQRVGIDLMYGIPGLKSSDFY 192

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L + LS  + HLSLY LT+EKGT + +   D     P E    ++      +    G 
Sbjct: 193 RDLDQFLSAGLPHLSLYSLTLEKGTKYSRDVSDSIKREPEEITQAEILVTLPELMEKFGY 252

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN++  G ES HNL YW Y  Y+GIGPGAH  ++   +    +   + +   K  
Sbjct: 253 RWYEVSNYAKPGYESKHNLKYWTYEPYLGIGPGAHGMIEGHRYGNPRNANLYQK---KQT 309

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE----MLAGRNLDIECERNLQR 364
                       LS         +   RL       ++         ++  I+  ++ ++
Sbjct: 310 EAKYEPATPSSELS---------LTLFRLFSPFRYLEFIETHLEKNSQSKYIQTIQSWEK 360

Query: 365 QGFIERVQF 373
           +G  +    
Sbjct: 361 RGLCDLSDG 369


>gi|261838095|gb|ACX97861.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori 51]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDILRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|13475361|ref|NP_106925.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14026113|dbj|BAB52711.1| coproporphyrinogen oxidase III [Mesorhizobium loti MAFF303099]
          Length = 449

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 149/365 (40%), Gaps = 27/365 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A E+       + + +Y+H P+C + C +C  ++   R      ++++S   E+  +
Sbjct: 37  WLKALES------GDEVSLYLHIPYCDRLCWFCACHTKQTRRYEPVASYLRSLHAEIATV 90

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L G +  + ++ FGGG+P++++P+++  +   +  ++   ++ +I++E  P+ ++   
Sbjct: 91  AGLVGGKAHVRAVHFGGGSPTMLKPEDMVALGTVLRDSFDFLADAKISVEIEPNDMDEAR 150

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALP 180
                + G+ R SLGVQ  + +  + + R  +  +  A +  +       ++ DL+Y LP
Sbjct: 151 LDTLAEIGMARASLGVQDFDPKVQKAINREQSFLQTKAVVDGIRSRGVGSVNLDLLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLT 239
            QT       + +AL+   D ++L+         F K     D   LP        + + 
Sbjct: 211 HQTRESVCSTVAQALTLEPDRMALFGYAHVP--WFKKHQTMIDESWLPGPAERFAQWQIA 268

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
             +    G  A  I + +                 N+  Y +      IG+GP + SR +
Sbjct: 269 ARLIMGAGYEAIGIDHFAKPDDALAVSARAGTIRRNFQGYTEDRCETLIGLGPSSISRFR 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +   S       + +MV     A V     S + +   +++  L    G S  D  
Sbjct: 329 QGYSQNMPST----AEYGRMVEGGHLATVRGIAFSEDDRVRGWIIERLMCDFGFSAADLV 384

Query: 348 MLAGR 352
              G 
Sbjct: 385 ERFGE 389


>gi|317180450|dbj|BAJ58236.1| coproporphyrinogen III oxidase [Helicobacter pylori F32]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/394 (18%), Positives = 140/394 (35%), Gaps = 22/394 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDTLRKEVIMQMMSNLKLDYSKIEER 393

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
              +     ++ L++       +   L    +G 
Sbjct: 394 FSIDFKAHFKKELEK--LKPYEEAGLLVFNPKGF 425


>gi|308182845|ref|YP_003926972.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
 gi|308065030|gb|ADO06922.1| coproporphyrinogen III oxidase [Helicobacter pylori PeCan4]
          Length = 457

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 65  LTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
                R ++   +GGGTP+   P  +  I   I +     S +VE++ E +P     ++ 
Sbjct: 99  AMNTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDVEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + RN        ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRNQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WMKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|302556862|ref|ZP_07309204.1| coproporphyrinogen III oxidase [Streptomyces griseoflavus Tu4000]
 gi|302474480|gb|EFL37573.1| coproporphyrinogen III oxidase [Streptomyces griseoflavus Tu4000]
          Length = 453

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 86/400 (21%), Positives = 158/400 (39%), Gaps = 19/400 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
            G+  ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R+  G R  
Sbjct: 42  AGEAKDALSLYLHIPFCEVRCGFCNLFTRIGAPDGLTGAYLDALDRQATAVREALGERTP 101

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   +        V +++EA+P++   +      +
Sbjct: 102 VRFATAAFGGGTPTFLTAAELERLCDIAERRMGADLRAVPLSVEASPATATADRLGVLAE 161

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+SLGVQS ++   R   R    ++  AA+   R    P ++ DLIY +  QT   
Sbjct: 162 RGTTRLSLGVQSFDDTEARAAVRPQRRADVEAALGRVRAARIPVLNIDLIYGIDGQTEHT 221

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL++  + L LY L I   T   +     D     +   + LY   +    AH
Sbjct: 222 WLRSLDAALAWRPEELYLYPLYIRPLTGLGRR--AVDPDPAWDAQRLRLYRAGRDHLLAH 279

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKH----- 300
           G     +       A      +Y    D  IG+G GA S      +    +++ H     
Sbjct: 280 GYEQRSMRMFRRADAPPQGADDYACQTDGMIGLGCGARSYTAELHYSFDYAVDMHEIRGI 339

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDIECE 359
            + ++     +         + + +     L+  L   +G+ V D+     GR    +  
Sbjct: 340 VDDYVARPAADFAHAEYGRRVDAGEARRRHLLQSLLQADGLEVADYRARFDGRTPLEDFP 399

Query: 360 RNLQR---QGFIERV--QFSRLRCTQRGMTMLDSVIANLA 394
             L R   +G++       + LR T  G+   D+V   L 
Sbjct: 400 AELARFAGRGWLHDTGPDPALLRLTPEGLAHSDAVGPELF 439


>gi|183221686|ref|YP_001839682.1| oxygen-independent coproporphyrinogen III oxidase-like protein
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
 gi|167780108|gb|ABZ98406.1| Oxygen-independent coproporphyrinogen III oxidase-like protein
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 407

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 172/369 (46%), Gaps = 24/369 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPR 69
           +++LGVYVH+P+C+KKC YCDF S         +       +       +    +L   R
Sbjct: 31  NSTLGVYVHFPYCLKKCDYCDFYSEGIGSGPANDESTLFSAYQSEVSERISHFPKL-RER 89

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           ++ ++FFGGGTPS    +     L+ +   ++ + + EI+IE NP  +  +    Y K G
Sbjct: 90  TVDTVFFGGGTPSKASTKLWKQFLEFLRSEFSFADDTEISIEVNPEDLSPDLLDEYAKIG 149

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           +NR+++GVQ+L  + L FLGR+++  +  + +  L  +   R+  DL+Y +P    + + 
Sbjct: 150 INRVNVGVQTLHPEGLSFLGRHYDKGKYTSLVTTLTHSPIQRVGIDLMYGIPGLKSSDFY 209

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L + LS  + HLSLY LT+EKGT + +   D     P E    ++      +    G 
Sbjct: 210 RDLDQFLSAGLPHLSLYSLTLEKGTKYSRDVSDSIKREPEEITQAEILVTLPELMEKFGY 269

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YE+SN++  G ES HNL YW Y  Y+GIGPGAH  ++   +    +   + +   K  
Sbjct: 270 RWYEVSNYAKPGYESKHNLKYWTYEPYLGIGPGAHGMIEGHRYGNPRNANLYQK---KQT 326

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE----MLAGRNLDIECERNLQR 364
                       LS         +   RL       ++         ++  I+  ++ ++
Sbjct: 327 EAKYEPATPSSELS---------LTLFRLFSPFRYLEFIETHLEKNSQSKYIQTIQSWEK 377

Query: 365 QGFIERVQF 373
           +G  +    
Sbjct: 378 RGLCDLSDG 386


>gi|322835530|ref|YP_004215556.1| Radical SAM domain protein [Rahnella sp. Y9602]
 gi|321170731|gb|ADW76429.1| Radical SAM domain protein [Rahnella sp. Y9602]
          Length = 441

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/391 (21%), Positives = 161/391 (41%), Gaps = 20/391 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGP 68
           M    +N   VY+H PFC   C +C F  +    +   E +    + E++      L   
Sbjct: 46  MRTLAANKRLVYLHIPFCATHCTFCGFYQNKLEAQA-TEQYCDYLIREIEQEAGSPLHQS 104

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             + +++FGGGTP+ +  + +  I+  + ++  ++ + EIT+E    + +         A
Sbjct: 105 APVHAVYFGGGTPTALSAKQLHRIITTLRRSLPLAPDCEITVEGRILNFDDERIDACLDA 164

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQW 187
           G NR S+G+Q+ + +  + +GR  +  EAI+ +  L       +  DL++ LP+QT   W
Sbjct: 165 GANRFSIGIQTFDTRIRQRMGRRADRDEAISFLRKLGERDRAAVVCDLMFGLPEQTPESW 224

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +LQ      +D + LY L +   T   K   +    LP  ++  D Y   ++  +   
Sbjct: 225 REDLQIIRDLPLDGVDLYALNLLPSTPLGKAVGNKRTTLPDVSMRRDFYLEGEAFLARDA 284

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
            H    S+ +    E +L+NL   +  D +  G GA   +   S+  A S     E++ +
Sbjct: 285 WHQISNSHWARNTRERNLYNLLIKKGADCLAFGSGAGGNLDGQSYMTARS----LEAYYQ 340

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ- 365
            +      ++     ++ +         L L+ GI    +  L+    D      L +Q 
Sbjct: 341 QLDAGSKPIMMMTASTTREHR-----WRLDLQGGIEAGRY-DLSRIVEDPFPLEPLLQQW 394

Query: 366 ---GFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G +   +  R   T  G     +++  L
Sbjct: 395 QQCGLM-NSEGPRFNLTPAGRFWASNMLQAL 424


>gi|281424604|ref|ZP_06255517.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           F0302]
 gi|281401275|gb|EFB32106.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           F0302]
          Length = 454

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 85/416 (20%), Positives = 153/416 (36%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A E++      N +  Y+H PFC   C YC  NS           + ++   E+  
Sbjct: 32  QYLKAVESSNNATADN-ISFYIHVPFCRHLCHYCGCNSVAMAKPDRITEYFETLHKEIDL 90

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+PS +    I  + + +   +    + EI IE +P  ++  
Sbjct: 91  LLPHLRKDRRISQIHYGGGSPSSMPLPLIRGVNEHLLSAFETIESPEIAIECHPGYLKAE 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++     +G NR SLG+Q      L  + R+ +       + + R    +++FD IY LP
Sbjct: 151 DWHYLLHSGFNRFSLGIQDFNADVLHTVNRHPSLLPVAEIMDILRKGGAKVNFDFIYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQ++ ++   ++ A S   D L  +       +LF +        LP +N  + ++    
Sbjct: 211 KQSVKEFVSTIETAKSLRPDRLVTFSYAHLP-SLFKRQQILEKAGLPLQNEKLGMFEEAA 269

Query: 241 SITSAHGLHAYEISNHSFLG--------AESLHNLNYWRY------GDYIGIGPGAHSRV 286
               A G     + +               +LH  N+  Y            G    S++
Sbjct: 270 RTLRAAGYVPIGMDHFVLPDDDLSVALQHHTLHR-NFQGYCPRRITAQVYAFGVSGISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +      K   +++  V      V     L+  Q+    ++  +    GI+  D 
Sbjct: 329 DEAYTQNT----KDISTYITQVNAGRLPVQRGYALAPWQRITREVIECIMCNNGINWHDM 384

Query: 347 EML---AGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                    ++           + LQ  G I       +R T  GM  + +V A  
Sbjct: 385 AQRLHCTVTDIWQAVHYNEAQLQTLQADGLIT-FDAEEVRVTPEGMPFVRNVAAAF 439


>gi|284038447|ref|YP_003388377.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
 gi|283817740|gb|ADB39578.1| oxygen-independent coproporphyrinogen III oxidase [Spirosoma
           linguale DSM 74]
          Length = 460

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 80/413 (19%), Positives = 156/413 (37%), Gaps = 34/413 (8%)

Query: 5   SAYENNMTGQGSNS-----LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
             ++  +T   +NS     + +Y+H PFC   C +C  N  + R    +E +I + L E 
Sbjct: 33  EDWQKRLTASFANSNYSAGISLYIHLPFCESLCTFCGCNKRITRNHDVEEPYIDAILNEW 92

Query: 60  QWMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-----ITIEAN 113
           +   +    R  I+ +  GGGTPS   P  +  ++ GI +        E        E +
Sbjct: 93  EMYCEWLPERPRIAELHLGGGTPSFFSPHELRRLMTGIFRWADPVPTTETSGPDFGWEGH 152

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMS 172
           P++    + +   + G  R+S GVQ  +    + + R+   +        AR I    +S
Sbjct: 153 PNNTTGEHLKTLYEYGFRRVSFGVQDYDPVVQKAIHRHQPFAHVQRVTQQARAIGYTSIS 212

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DL++ LP Q  +     + + LS   D ++ Y                 D  LPS    
Sbjct: 213 HDLVFGLPFQQQSSITDTILQTLSLRPDRIAFYSYAHVPWIKGTGQRGFADNDLPSAAKK 272

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAESLH--------NLNYWRYGD-----YIGIG 279
             LY   +++  A G     + + +    +SL+        + N+  Y        +G+G
Sbjct: 273 RALYETGRALLEAGGYTEIGMDHFALP-HDSLYKAMHTGQLHRNFMGYTTTQTNILLGLG 331

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ-QADEFLMM-GLRL 337
             A S V        +  +K   ++   V +N   +++   L+ E  Q  + ++    R 
Sbjct: 332 ASAISDVGTAF----MQNQKDIGTYQDEVTQNQLPILKGHLLTDEDTQIRQHILNIMCRF 387

Query: 338 REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +   S+ +W       +  + + + +  G +   +   L     G   L ++ 
Sbjct: 388 QTRWSIIEWTPAEWETISHQLD-DFRDDGLLVYDETG-LWVRPEGRPFLRNIC 438


>gi|42524808|ref|NP_970188.1| coproporphyrinogen III oxidase [Bdellovibrio bacteriovorus HD100]
 gi|39577018|emb|CAE78247.1| oxygen-independent coproporphyrinogen III oxidase [Bdellovibrio
           bacteriovorus HD100]
          Length = 449

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 143/390 (36%), Gaps = 26/390 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRS 70
           +G+    +Y+H PFC   C +C  N+ + +    +  ++   L E Q           + 
Sbjct: 44  EGTGGWSLYLHIPFCESLCTFCGCNNIITKDHKRETPYVDMVLKEWQLYLDQVPELLEKP 103

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAG 129
           +  I  GGGTP+ +  + +  +L  I     +   + E +IE +P        +  R+ G
Sbjct: 104 LKHIHLGGGTPTFLSAEALTQLLKPILSRVKIDTHDFEGSIEVDPRRTNAAQLKALRELG 163

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
            NR+S+GVQ    +  R + R             AR++    ++FDLIY L +QT     
Sbjct: 164 FNRVSMGVQDFHPEVQRLVNRIQPLEITQKLTQDARDMGYTSVNFDLIYGLARQTPESIT 223

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              +  ++   D ++LY   +    +        D  LP  +    LY + + I    G 
Sbjct: 224 ETAKATVALRPDRIALYSFALVP-WIKPAQRLFKDEDLPKASEKRRLYEIARGILIEGGY 282

Query: 249 HAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAIS 296
               + + +           E   + N+  Y D      +G+G  + S      H+    
Sbjct: 283 VEVGMDHFALPTDNLCIAMNEKRLHRNFMGYTDQRTDVLLGMGVSSISETPYSFHQN--- 339

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
            EK    +   + +     +    L+ E +     ++ L     +    +   A  N   
Sbjct: 340 -EKVLPLYEAALNEGRLPTLRGHILTEEDKVRREQILNLMTNFEVP---FVSEAQENQSK 395

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           E    + +   +E ++  +L   + G   L
Sbjct: 396 EFLAEMIKDELVE-IKDHKLMVNEAGRPFL 424


>gi|326334446|ref|ZP_08200658.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sp. oral taxon 338 str. F0234]
 gi|325693413|gb|EGD35340.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sp. oral taxon 338 str. F0234]
          Length = 454

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 158/409 (38%), Gaps = 23/409 (5%)

Query: 2   KYLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           K++++ + + +   ++  + +Y+H PFC   C +C  + H+ +    +  +I++ L E Q
Sbjct: 34  KWVASVQTSFSQSNASQGISLYIHLPFCESLCTFCGCHKHITKRHEMEAPYIENILKEWQ 93

Query: 61  WMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                   +  +  I  GGGTP+    +++  +++ I +  T +S+ + + E +P++   
Sbjct: 94  LYLNTFPGKPLVKEIHLGGGTPTFFSAEHLQYLIEKIFEKATRTSDFQFSFEGHPNNTTY 153

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYA 178
            + +   + G  R+S GVQ       R + R             AR +    +S DLI+ 
Sbjct: 154 QHLETLYRLGFTRVSYGVQDYSPIVQRAIHRIQPFENVERVTLQARALGYTSISHDLIFG 213

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q  T     ++       D +S Y                 +  LP+ +    LY +
Sbjct: 214 LPFQEETDVRHTIECTNRLRPDRISFYSYAHVPWIKGTGQRGFDENDLPTADQKRHLYEI 273

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSR 285
            +     +G     + + +    +        +LH  N+  Y        IG+G  A S 
Sbjct: 274 GKEQLLDNGYIEIGMDHFALPSDQMYESFVNGTLHR-NFMGYTASKTQLMIGLGISAISD 332

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  +      K  + + +++ ++   V     LS E       ++ L  +   S +D
Sbjct: 333 SWYGFSQNV----KTIKEYEQVLTQDRIPVYRGHILSEEDLILRRHILNLMCQFYTSWED 388

Query: 346 WEMLAGRNLDI-ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +      ++ +    +++ G I  +  + +  T  G   + ++    
Sbjct: 389 KSLQFPEAEEVKDRLLEMEKDGLIHILDNA-IEITDAGKPFVRNICMAF 436


>gi|302338523|ref|YP_003803729.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635708|gb|ADK81135.1| oxygen-independent coproporphyrinogen III oxidase [Spirochaeta
           smaragdinae DSM 11293]
          Length = 392

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 111/377 (29%), Positives = 174/377 (46%), Gaps = 29/377 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM----RQLTGPRSISSI 74
           L +Y+H PFC  KC YCDF S +  +       +      ++ M     +L   R++ +I
Sbjct: 8   LSLYIHVPFCFDKCDYCDFFS-IPHHGRPDNRLLDREFHLIESMGSRWLRLLQCRNLETI 66

Query: 75  FFGGGTPSLIEPQNIALILDGIA---KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + GGGTPS I    +  +L  IA   K   ++   E TIEANP  +  +         VN
Sbjct: 67  YIGGGTPSSIGLDRLERLLSIIAGLIKKEGIAFEGEYTIEANPRDISPDLITLLESYKVN 126

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEME 190
           R+SLG+QSL +Q LR +GR+ + ++++ A+  L+     R S D+I  +P Q     +  
Sbjct: 127 RLSLGLQSLNDQDLRAIGRSGSRAQSLNALSVLSSRWKGRFSLDIIAGIPGQKSESIDEI 186

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ A+    DHLS+YQLTIE+GT   +    G    P +   + L+          G   
Sbjct: 187 VETAVESGADHLSIYQLTIEEGTPLARKIAQGLRRAPQDEDYLRLFKHAVETAEKAGFKR 246

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+S  +  G ES HNL YW    Y+G+G GA S + +     A+        ++K    
Sbjct: 247 YEVSAFARKGCESRHNLRYWYLRPYLGLGSGAVSTLPLADGG-ALRFCTGKGRYMK---- 301

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN-----LDIECERNLQRQ 365
                   E LS +Q+  E LM G RL  G++        G       L  +   + Q +
Sbjct: 302 --------EILSPKQRFTEALMTGFRLVAGVAESMISG-TGIPDHPFRLIGKTITDYQNR 352

Query: 366 GFIERVQFSRLRCTQRG 382
           G +  ++  R+  T +G
Sbjct: 353 GLL-FMRNGRMGLTHQG 368


>gi|253827615|ref|ZP_04870500.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
 gi|253511021|gb|EES89680.1| Oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
          Length = 459

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 147/401 (36%), Gaps = 27/401 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
           + +N L +YVH PFC   C +C  N      +  +  +++    E++ ++  L   + + 
Sbjct: 47  KDTNPLSLYVHLPFCRSACYFCGCNVIYTSKEENKTLYLEELQKELRILKNTLDYTKQVY 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  +        +  EI  E +P     +  Q  +  G N
Sbjct: 107 QLHFGGGTPTFFNAKELEFLIQMLKDTFPNFHTEAEIACEIDPRFFNKDQMQVLKNGGFN 166

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           R+S G+Q    +    + R    S    AI +AR+   R ++FDLIY LP QT+  ++  
Sbjct: 167 RLSFGIQDFNPKVQEAIHRIQPFSLVQNAISIARDFGIRSINFDLIYGLPYQTLETFQET 226

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + L    D  +++        +   M K  +  LP     +++   T      +G   
Sbjct: 227 LSQCLKLNPDRFAIFNYAHVP-WIKKTMRKIDETTLPMPEEKLNILKTTIQHLQENGYKM 285

Query: 251 YEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E            N+  Y        IGIG  +                
Sbjct: 286 IGMDHFAKPDDELFKSIQKGQLRRNFQGYSTKGGTQTIGIGLTSIG----EGIDYYAQNY 341

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+ K +        +   LS + +  + ++M L     +     E     N     
Sbjct: 342 KDLPSYKKALDLGILPFSKGIKLSLDDRIRKSVIMQLMSNFKLDFSTIEKQFNINFKEYF 401

Query: 359 ERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +L+       +  I  +  + +  +  G  ++ +++   
Sbjct: 402 SDSLKELEVFTAENLIT-IHNNGIEVSPTGTLLIRNIVMAF 441


>gi|224418291|ref|ZP_03656297.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|313141823|ref|ZP_07804016.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
 gi|313130854|gb|EFR48471.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           canadensis MIT 98-5491]
          Length = 456

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/401 (18%), Positives = 147/401 (36%), Gaps = 27/401 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
           + +N L +YVH PFC   C +C  N      +  +  +++    E++ ++  L   + + 
Sbjct: 44  KDTNPLSLYVHLPFCRSACYFCGCNVIYTSKEENKTLYLEELQKELRILKNTLDYTKQVY 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  +        +  EI  E +P     +  Q  +  G N
Sbjct: 104 QLHFGGGTPTFFNAKELEFLIQMLKDTFPNFHTEAEIACEIDPRFFNKDQMQVLKNGGFN 163

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEME 190
           R+S G+Q    +    + R    S    AI +AR+   R ++FDLIY LP QT+  ++  
Sbjct: 164 RLSFGIQDFNPKVQEAIHRIQPFSLVQNAISIARDFGIRSINFDLIYGLPYQTLETFQET 223

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + L    D  +++        +   M K  +  LP     +++   T      +G   
Sbjct: 224 LSQCLKLNPDRFAIFNYAHVP-WIKKTMRKIDETTLPMPEEKLNILKTTIQHLQENGYKM 282

Query: 251 YEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E            N+  Y        IGIG  +                
Sbjct: 283 IGMDHFAKPDDELFKSIQKGQLRRNFQGYSTKGGTQTIGIGLTSIG----EGIDYYAQNY 338

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+ K +        +   LS + +  + ++M L     +     E     N     
Sbjct: 339 KDLPSYKKALDLGILPFSKGIKLSLDDRIRKSVIMQLMSNFKLDFSTIEKQFNINFKEYF 398

Query: 359 ERNLQR------QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +L+       +  I  +  + +  +  G  ++ +++   
Sbjct: 399 SDSLKELEVFTAENLIT-IHNNGIEVSPTGTLLIRNIVMAF 438


>gi|154174156|ref|YP_001408008.1| coproporphyrinogen III oxidase [Campylobacter curvus 525.92]
 gi|112803318|gb|EAU00662.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter curvus 525.92]
          Length = 348

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 96/328 (29%), Positives = 145/328 (44%), Gaps = 23/328 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KCPYC F S V   +     +  + LT++++          SS+F GGGT
Sbjct: 3   LYIHIPFCESKCPYCAFGS-VTNAQALTGGYFDALLTDIKFQIDKFKISKFSSVFIGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  +    I   I+         EIT EANP+S  +   +  R  GVNRIS G QS 
Sbjct: 62  PSAVSAKFYKKIFAEISPFCN--DKTEITSEANPNSTNLRWLKDMRNLGVNRISFGAQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +  L  LGR HN ++   A+  A+N  F  ++ DLIYA       +   E+    +  V
Sbjct: 120 FDDKLELLGRAHNCTQIYKAVQNAKNAGFRNINIDLIYATKLDNKKRLAQEVLALKNLGV 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H S Y LT+E+ T F +  +         + A     + + I    GL  YE+SN    
Sbjct: 180 THASAYSLTLEENTPFERKFEL------RNDSAALAKFMMKQI-ENIGLKQYEVSNF--- 229

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G    HNL YW+  +YIG G  +   ++   +      +K    ++           E E
Sbjct: 230 GKPCKHNLGYWQGKEYIGAGAYSVGFMRSARYYA----QKDLAGYIASPTHR-----EIE 280

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWE 347
            L+ ++   E + +G R   GI  +   
Sbjct: 281 VLNDDELRMEHVFLGARSCVGIDERRLT 308


>gi|262377338|ref|ZP_06070562.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           lwoffii SH145]
 gi|262307791|gb|EEY88930.1| oxygen-independent coproporphyrinogen III oxidase [Acinetobacter
           lwoffii SH145]
          Length = 457

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 24/395 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
           S  + +Y+H PFC   C +C  +  V +    ++ +IQ+ L E     +L   + I   I
Sbjct: 52  SEGISLYIHLPFCESLCTFCGCHKRVTKRHEVEQPYIQALLKEWGLYCELLQEKPIIKEI 111

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+     ++A ++ GI     V+   E + E +P++    + QG    G  R+S
Sbjct: 112 HFGGGTPTFFSMAHLAQLIQGILAKADVAPEYEFSFEGHPNNTTREHLQGLYDLGFRRVS 171

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
            GVQ   E   + + R             AR I    +S DL++ LP Q++      +++
Sbjct: 172 YGVQDYNETVQKAIHRIQPYENVKQVTEWAREIGYESISHDLVFGLPFQSLDDVLNTIEQ 231

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             S   D L+LY                 D  +P + +  + Y   +    AHG H   +
Sbjct: 232 TNSLLPDRLALYSYAHVPWIKGNGQRGFKDADVPKDAIKRECYEAGKKKLLAHGYHEIGM 291

Query: 254 SNHSFLG--------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +           A +LH  N+  Y        IG+G  + S     S        K 
Sbjct: 292 DHFALEKDAMSQSFQAGTLHR-NFMGYTASKTQVMIGLGISSIS----DSWYSFAQNVKT 346

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            E + + + +N   V +   L+ E       ++ L      S ++ EML    +D   E+
Sbjct: 347 IEEYYECLARNEIPVFKGHVLNQEDLIIRQHILNLMCSFSTSWENSEMLFPE-IDEVLEQ 405

Query: 361 --NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              + + G I+    S     ++G   + ++    
Sbjct: 406 LDEMAQDGLIQFSDSSVTIL-EKGKPFVRNICMAF 439


>gi|206602846|gb|EDZ39327.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum sp. Group II '5-way CG']
          Length = 389

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 92/383 (24%), Positives = 175/383 (45%), Gaps = 23/383 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YV  PFC ++C YC     ++  +     ++++   E + + +      + +++ GGGT
Sbjct: 14  LYVQVPFCPERCHYCSLPVSLQTERAP--AYLRALFREKKRLMEREDLSGLETLYVGGGT 71

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++   ++  +L+ + K   +    EIT+E+ P +V        R +GV R+S G++S+
Sbjct: 72  PTVLPLPHLQELLEELQK--GLPPLAEITVESRPDTVTPEILHRLRSSGVTRLSFGMESV 129

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +RFLGR  N  E +  +   RN F   +S D I      +   +  E Q  L+  +
Sbjct: 130 RSEHMRFLGRTMNVLEPVRFLEFVRNHFSGFVSMDFIAGGEGFSEDAFLQEAQSLLAEGL 189

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF- 258
           DHLSLY LT+E+ T      + G++   +E+ A  ++       S+ G   YE++N S  
Sbjct: 190 DHLSLYPLTVEEQTSLKGRLRRGEISAGTEDAAGRIWERIVRALSSMGWFRYEVANFSRS 249

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
                 HN   W+  D+ GIG GAH R++        S+     S+ + +         +
Sbjct: 250 PDTVCRHNHLVWQGYDHAGIGAGAHQRIRSVRTINVRSLV----SYEERLFSMKAPFEGR 305

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWE------MLAGRNLDIECERNLQRQGFIERVQ 372
           E L  +++  E L    RL  G  +           + G +       +L  +G+++   
Sbjct: 306 ESLDQDERLLEILYTNARLSNGFPLSWLSSEDRSNAIGGADFS-----DLVEEGYLDSRA 360

Query: 373 F--SRLRCTQRGMTMLDSVIANL 393
           +   R+  T++G  +LD ++  +
Sbjct: 361 YSSGRVIFTEKGRDLLDGLMGEI 383


>gi|308061995|gb|ADO03883.1| coproporphyrinogen III oxidase [Helicobacter pylori Cuz20]
          Length = 457

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 139/376 (36%), Gaps = 22/376 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QILFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKV 288
                      + + +    E         LH  N+  Y        IGIG  +      
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELHR-NFQGYTTKKFTQTIGIGVTSIG---- 332

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                     K    + K +      V     L+ E    + ++M +     +     E 
Sbjct: 333 EGSDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDALRKEVIMQMMSNLKLDYSKIEE 392

Query: 349 LAGRNLDIECERNLQR 364
               +     ++ L++
Sbjct: 393 KFSIDFKAHFKKELEK 408


>gi|13475538|ref|NP_107102.1| coproporphyrinogen III oxidase [Mesorhizobium loti MAFF303099]
 gi|14026290|dbj|BAB52888.1| anaerbic coproporphyrinogen III oxidase [Mesorhizobium loti
           MAFF303099]
          Length = 449

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/353 (20%), Positives = 146/353 (41%), Gaps = 21/353 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           +G + + +Y+H P+C K C +C  ++   R+      F+ S   E++ +  L   +  + 
Sbjct: 42  KGDDEISLYLHIPYCDKLCWFCACHTKQTRHYQPVATFLHSLHREIEAVGSLVRGKGRVR 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I FGGG+P++++P++I  + + +   + V  +  +++E +PS ++          G+ R
Sbjct: 102 AIHFGGGSPTMLKPEDILSLGEALRDRFDVLDDASLSVEIDPSDMDEARLDALSAIGMTR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMEL 191
            SLGVQ  + +  + + R  +     + +   R      ++ DL+Y LP QT+      +
Sbjct: 162 ASLGVQDFDPKVQKAINREQSFLLTKSVVDAVRARGVNSVNLDLLYGLPHQTLESVARTV 221

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHGLHA 250
            +AL+   D L+L+         F K     D   LP     +    +   +    G  A
Sbjct: 222 AQALTLRPDRLALFGYAHVP--WFKKHQTMIDEAWLPDSAGRLAQSQIAARLIVDAGYEA 279

Query: 251 YEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIE 298
             + + +                 N+  Y +      IG+GP A SR + G  +  ++  
Sbjct: 280 LGLDHFAKPDDTLAISARTGKIRRNFQGYTEDNCETLIGLGPSAISRYRQGYAQNIVAT- 338

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
               ++ K+V     AV     LS +  A  +++  L      S  +     G
Sbjct: 339 ---GAYEKVVDSGQLAVARGVELSVDDLARGWIIERLMCHFAFSAIELVERFG 388


>gi|149203240|ref|ZP_01880210.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
 gi|149143073|gb|EDM31112.1| coproporphyrinogen III oxidase [Roseovarius sp. TM1035]
          Length = 451

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 143/379 (37%), Gaps = 23/379 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   +       ++++  TE+  + RQL     +S + +G
Sbjct: 51  ISLYVHVPFCRRLCWFCACRTQGTQTDAPVAAYLETLKTEIAMLGRQLPRGVRLSRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  ++ +   I      +   E ++E +P+ ++         AG+NR S+GV
Sbjct: 111 GGTPTLLSPGMMSELAGAIRDIAPFTDTTEFSVEIDPNEIDAARLDALAGAGMNRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +EQ  + +GR         A+   R      ++ D++Y LP Q   +    +Q+ LS
Sbjct: 171 QDFDEQIQKSIGRIQGYDITRHAVDEIRARGVKSLNADILYGLPHQNRARITESVQKLLS 230

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D ++LY        +  +        LP+    + L+   + +          I + 
Sbjct: 231 LNPDRVALYGYAHVP-WMAKRQQMIPSDALPTPQERLALFETARRLFLWDNYDEIGIDHF 289

Query: 257 S-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           +             L   N+  Y D      IG+G  + SR   G  + A +   H    
Sbjct: 290 ATASDGLSVAQKSGLLRRNFQGYTDDTAEVLIGLGASSISRFPQGYAQNAPATGAHTG-- 347

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +R    +       S E +    ++  L     I   +           E +  L  
Sbjct: 348 --AIRDGRFSTTRGHIFSPEDKLRSRMIEMLMCDFRIDSTEIFREFAIP-AAELQAMLSA 404

Query: 365 QGFIERVQFSRLRCTQRGM 383
              +ER     L+    G+
Sbjct: 405 ---VERRFDGHLKLDATGL 420


>gi|317014086|gb|ADU81522.1| coproporphyrinogen III oxidase [Helicobacter pylori Gambia94/24]
          Length = 457

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILEALIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVSLSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|304310627|ref|YP_003810225.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
 gi|301796360|emb|CBL44568.1| Oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium HdN1]
          Length = 469

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 78/405 (19%), Positives = 157/405 (38%), Gaps = 30/405 (7%)

Query: 5   SAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + Y + +  +     +L +YVH PFC  +C YC  +  V + +    +++   + E++ +
Sbjct: 45  ADYRDAIQKSAADRRALALYVHLPFCPTQCYYCACDRVVTQDRDKMRSYLDHLIKEIRLV 104

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEV 119
             L G  R I  + +GGGTP+  +   +  ++  + +++ +  S   +++IE +P SV V
Sbjct: 105 APLVGKTRPIVQLQWGGGTPTYFDDSELTELMYHLGRHFNILASDRADVSIEIDPRSVSV 164

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 R  G N ISLGVQ    +  + + R          +  AR+  F  ++ D IY 
Sbjct: 165 ERLGLLRGLGFNHISLGVQDFNREVQQGINRVLPEFRVEELVAAARSYRFRSVNLDFIYG 224

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q +      + +A++ + D +SL+   +     +       + VLPS    + + + 
Sbjct: 225 LPHQNLQTMLNTMAKAIALSPDQISLFSY-LHLPARYKAQGMLDEAVLPSPEERISMLSA 283

Query: 239 TQSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRY-----GDYIGIGPGAHSRV 286
             +   A G       +            AE     N+  Y      D +G+G  A S++
Sbjct: 284 VANQMLAAGYVRIGTDSFVKPESELGVAYAEGRLRRNFHGYIAHRSADLLGLGASAVSQI 343

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   S+      +  ++      +     L  +      ++M L  R  +  K+ 
Sbjct: 344 GDLYCQNTSSV----RDYQSVLGDGDLPLAAGIRLGRDDLIRRDVIMSLICRSKVDRKEL 399

Query: 347 EMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +     + +          +     G +E    +    T RG  +
Sbjct: 400 KERYNIDFETYFAAEQLLIKQFVSDGLLE-SDGALYHVTSRGKLV 443


>gi|32266474|ref|NP_860506.1| coproporphyrinogen III oxidase [Helicobacter hepaticus ATCC 51449]
 gi|32262525|gb|AAP77572.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           hepaticus ATCC 51449]
          Length = 462

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 83/396 (20%), Positives = 149/396 (37%), Gaps = 25/396 (6%)

Query: 6   AYENNMTGQGSN---SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           AY   ++   S     L +YVH PFC   C YC  N      +  ++++I     E+  +
Sbjct: 40  AYIQALSRADSMSNLPLSIYVHLPFCRSACYYCGCNVVYTSKEEKKQHYIHYLKKELALL 99

Query: 63  RQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVN 120
            +     R +    FGGGTP+    + +  ++  I   +T  + + EI+ E +P      
Sbjct: 100 SKYMDTSREVVQFHFGGGTPTFFNAKELQEVISLIRNTFTHFAPSAEISCEIDPRFFVRE 159

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +  +  G NR+S GVQ  E++    + R  +     AAI LAR      ++FDLIY L
Sbjct: 160 QMEVLKDNGFNRLSFGVQDFEDKVQEAVHRKQSVELVSAAISLAREFGINSVNFDLIYGL 219

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q    +   L++ ++ + D L+++        +   M K  +  LPS    +++   T
Sbjct: 220 PFQNEVTFARTLEKVVALSPDRLAIFNYAHLP-WMKKTMRKIDETTLPSPAQKLEILKNT 278

Query: 240 QSITSAHGLHAYEISNHSFLGAE----SLHN---LNYWRYG-----DYIGIGPGAHSRVK 287
            +           + + +    E      HN    N+  Y        IGIG  + S   
Sbjct: 279 IAFLQEQDYAMIGMDHFAKKSDELYLAKQHNQLRRNFQGYTTRGFSQTIGIGLTSIS--- 335

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                      K   ++   +      V     L+ E    + ++MGL     +   + E
Sbjct: 336 -EGLDYYSQNYKDMNAYESALDNGRLPVERGVRLTDEDILRKEVIMGLMNNLCLDFANIE 394

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
                +        L      E  +   ++ T +G+
Sbjct: 395 SKFNIDFKTHFAPALAS--LREYEEIGLVQITPQGI 428


>gi|57505841|ref|ZP_00371766.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis RM3195]
 gi|57015871|gb|EAL52660.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis RM3195]
          Length = 451

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 146/396 (36%), Gaps = 25/396 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSI 71
            +    L +Y H PFC   C +C  N      +  ++ ++     E+  +  L    + +
Sbjct: 40  RESKRDLSLYFHLPFCRSACYFCGCNVIYTAKEESKKRYLTYLFRELDILSSLLNTQKKV 99

Query: 72  SSIFFGGGTPSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             + FGGGTP+    Q +  LIL   +      +  E++ E +P            + G 
Sbjct: 100 VQMHFGGGTPTFFSAQELEHLILKIKSIFTNFDAQAELSCEIDPRFFNDAQADVLVQNGF 159

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NRIS GVQ  +E+  + + R  +      A   +       ++ DLIY LP Q +  ++ 
Sbjct: 160 NRISFGVQDFDERVQKEIHRIQSFDLTKEALFKVRSRGIKSVNIDLIYGLPFQNLQSFKQ 219

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L + L    D L+++        L   M K  +  LPS +V + +    +     +   
Sbjct: 220 TLDKILLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLQILEYCEQFLGQNHYK 278

Query: 250 AYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAIS 296
              + + +    E        +LH  N+  Y      D +G+G  +              
Sbjct: 279 MIGMDHFAKEDDELFKALNDNTLHR-NFQGYTTKGGVDLVGVGLTSIG----EGQNYYAQ 333

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             K  + + + + +          LS + +  + ++M L     + +K+ E     +   
Sbjct: 334 NYKDLKFYEEAIERGILPFERGVLLSDDDRLRKAVIMALMANFKLDIKEIEREFKIDFRE 393

Query: 357 EC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 + L+  G    V+   ++  + G  ++ ++
Sbjct: 394 YFKQDLKALEEYGEFVSVENDFIKVNETGSMLIRNI 429


>gi|315638023|ref|ZP_07893208.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis JV21]
 gi|315481871|gb|EFU72490.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           upsaliensis JV21]
          Length = 451

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 151/398 (37%), Gaps = 31/398 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +    L +Y H PFC   C +C  N      +  ++ ++     E++ +  L    + + 
Sbjct: 41  ESKRDLSLYFHLPFCRSACYFCGCNVIYTAKEESKKRYLTYLFRELEILSSLLDTQKKVV 100

Query: 73  SIFFGGGTPSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  LIL   +      +  E++ E +P            + G N
Sbjct: 101 QMHFGGGTPTFFSAEELESLILKIKSIFTNFDAQAELSCEIDPRFFNDAQADVLVQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R  +      A   +       ++ DLIY LP Q +  ++  
Sbjct: 161 RISFGVQDFDERVQKEIHRIQSFDLTKEALFKVRSRGIKSVNIDLIYGLPFQNLQSFKQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + L    D L+++        L   M K  +  LPS +V + +    +     +    
Sbjct: 221 LDKILLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLQILEYCEQFLGQNHYKM 279

Query: 251 YEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISI 297
             + + +    E        +LH  N+  Y      D +G+G  +               
Sbjct: 280 IGMDHFAKEDDELFKALNDNTLHR-NFQGYTTKGGVDLVGVGLTSIG----EGQNYYAQN 334

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            K  +S+ + + +          LS + +  + ++M L     + +K+ E     +    
Sbjct: 335 YKDLKSYEEAIERGVLPFERGVLLSDDDRLRKAVIMALMANFKLDIKEIEREFKIDFGEY 394

Query: 358 CERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
            +++L+    +E       V+   ++  + G  ++ ++
Sbjct: 395 FKQDLKA---LEEYNEFVSVENDFIKVNETGSMLIRNI 429


>gi|308063542|gb|ADO05429.1| coproporphyrinogen III oxidase [Helicobacter pylori Sat464]
          Length = 457

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKKSFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYIALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGYLPVERGVALTKEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|299142110|ref|ZP_07035244.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
 gi|298576572|gb|EFI48444.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella oris
           C735]
          Length = 454

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 86/416 (20%), Positives = 154/416 (37%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A E++      N +  Y+H PFC   C YC  NS           + ++   E+  
Sbjct: 32  QYLKAVESSNNATADN-ISFYIHVPFCRHLCHYCGCNSVAMAKPDRITEYFETLHKEIDL 90

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+PS +    I  + + +   +    N EI IE +P  ++  
Sbjct: 91  LLPHLRKDRRISQIHYGGGSPSSMPLPLIRGVNEHLLSAFETIENPEIAIECHPGYLKAE 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++     +G NR SLG+Q      L  + R+ +       + + R    +++FD IY LP
Sbjct: 151 DWHYLLGSGFNRFSLGIQDFNADVLHTVNRHPSLLPVAEIMDILRKGGAKVNFDFIYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQ++ ++   ++ A+S   D L  +       +LF +        LP +N  + ++    
Sbjct: 211 KQSVKEFVSTIETAISLRPDRLVTFSYAHLP-SLFKRQQILEKAGLPLQNEKLGMFEEAA 269

Query: 241 SITSAHGLHAYEISNHSFLG--------AESLHNLNYWRY------GDYIGIGPGAHSRV 286
               A G     + +               +LH  N+  Y            G    S++
Sbjct: 270 RTLRAAGYVPIGMDHFVLPDDDLSVALQHHTLHR-NFQGYCPRRITAQVYAFGVSGISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +      K   +++  V      V     L+  Q+    ++  +    GI+  D 
Sbjct: 329 DEAYAQNT----KDILTYITQVNAGRLPVQRGYALAPWQRITREVIECIMCNNGINWHDM 384

Query: 347 EML---AGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                    ++           + LQ  G I       +R T  GM  + +V A  
Sbjct: 385 AQRLHCTVTDIWQAVHYNEAQLQTLQADGLIIFDAED-VRVTPEGMPFVRNVAAAF 439


>gi|87124518|ref|ZP_01080367.1| coproporphyrinogen III oxidase [Synechococcus sp. RS9917]
 gi|86168090|gb|EAQ69348.1| coproporphyrinogen III oxidase [Synechococcus sp. RS9917]
          Length = 453

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 158/405 (39%), Gaps = 29/405 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQ- 64
               +       L +YVH PFC   C YC  N    +      E ++ S   E++ + + 
Sbjct: 42  LRQQLADVTDAPLSLYVHVPFCRHACWYCGCNRITTQLGSKVVEPYLASLAQELELITEA 101

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   R +S + +GGGTP+ +  +  A + + I +++    ++E +IE NP  +  +    
Sbjct: 102 MPQRRRLSQMHWGGGTPNYLNREETAQLWELIRRHFDFDDDLEASIEVNPEGLSRDAACQ 161

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R+ G NRIS G+Q  +      + R    ++   A+   R   F  ++ DLI  LP QT
Sbjct: 162 LRELGFNRISFGIQDADPDVQNAVNRVVPETQLRCAMLWLREAGFESVNVDLICGLPLQT 221

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             ++   L+       D +SL+              K     LPS+   + +      + 
Sbjct: 222 PERFHRTLELVQELRPDRISLFSFAYLPE-QLPMQRKIQAEDLPSQRQRLSMLEHANQLL 280

Query: 244 SAHGLHAYEISNHSF-------LGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSH 291
            A+G  A  + +++           E   + N+  Y      D +GIGP A S+      
Sbjct: 281 CANGYDAIGMDHYALHDDGLAEAAREGRLHRNFQGYTTGGELDLLGIGPSAISQF----R 336

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA-DEFLMMGLRLREGISVKDWEMLA 350
            +    E+  +++   + +    V     ++  Q      L+  +  +  + +       
Sbjct: 337 HLFSQNERDLKAYGAALAQGQLPVERGLVVTDPQVLQRRELIREVMCQFEVQLPP----T 392

Query: 351 GRNLDIECERNLQRQGFIERVQFS----RLRCTQRGMTMLDSVIA 391
           G   ++   + L   G +   Q +     +R T+ G  ++ ++ A
Sbjct: 393 GFEQELADFKRLACDGLVCLSQGADGSITVRVTKDGRWLIRTIAA 437


>gi|260432396|ref|ZP_05786367.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416224|gb|EEX09483.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 451

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 80/392 (20%), Positives = 151/392 (38%), Gaps = 31/392 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            ++SA          +S+ +YVH PFC + C +C   +   +       ++     E+  
Sbjct: 40  DWISAIR------PGSSISLYVHVPFCRRLCWFCACRTQGTQTDNPVIAYVDVLKAELDL 93

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  +L    ++S + +GGGTP+L+ P  +  +   I     +  N E ++E +P+ V+  
Sbjct: 94  LAARLPAGVTLSRLHWGGGTPTLLNPDLMRELAAHILGIVPLGPNAEFSVEIDPNEVDAA 153

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
                 +AG+NR S+GVQ  +++  + +GR  +      AI + R    P ++ D++Y L
Sbjct: 154 RLDALAEAGMNRASIGVQDFDDEIQKTIGRIQSYDTTREAIDMIRERGVPSLNADILYGL 213

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT  +    +Q+ LS + D ++LY        +  +        LP+    ++L++  
Sbjct: 214 PHQTKARMTESVQKLLSLSPDRVALYGYAHVP-WMAKRQQLIPSDALPTPEQRLELFDTA 272

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNL-------NYWRYGD-----YIGIGPGAHSRVK 287
           + +          I + +       H L       N+  Y D      IG+G  + SR  
Sbjct: 273 RRLFLWDNYEEIGIDHFATKDDGLTHALKAGRLKRNFQGYTDDQAEVLIGVGASSISRFP 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  + A +   H     K VR    +         +      L+  L     I   +  
Sbjct: 333 QGYAQNAPATSAHT----KAVRDGRFSTARGHLFKGQDILRARLIEALMCDFRIDTAEIL 388

Query: 348 MLAGRNLDIECERNLQR-----QGFIERVQFS 374
                +   E     QR      G ++     
Sbjct: 389 RDHDIS-AAELTAMYQRANDAFDGLLQITDDG 419


>gi|311898355|dbj|BAJ30763.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Kitasatospora setae KM-6054]
          Length = 447

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 83/395 (21%), Positives = 154/395 (38%), Gaps = 14/395 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRS 70
            G+  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+ L     
Sbjct: 41  RGEKQDALSLYLHVPFCEVRCGFCNLFTRIGSPEGLTTAYLDALERQAAQVREALAPGAR 100

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAG 129
            +   FGGGTP+ +    +  + D       V    V +++EA+P +   +  +   + G
Sbjct: 101 FALAAFGGGTPTYLSAAELERLCDIAESRMGVDLRAVPLSVEASPDTATADRLRVLAERG 160

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             R+SLGVQS  +   +   R    +   AA+   R   FP ++ DLIY +  QT   W 
Sbjct: 161 TTRLSLGVQSFLDGEAKAAVRPQKRAAVEAALERVRAAGFPVLNVDLIYGIEGQTPASWV 220

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  AL +  + L LY L +   T   +    G      +   + LY   +    A G 
Sbjct: 221 ASLDAALRWRPEELYLYPLYVRPLTGLGRHGAAGAAEPAWDAQRLALYRAGRDHLLAEGY 280

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPE 302
               +      GA       Y    D  +G+G GA S      +       A  + +  +
Sbjct: 281 EQVSMRMFRRAGAARASAGEYACQTDGMVGLGCGARSYTSRLHYSFDYAVDAREVRRIID 340

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---E 359
            ++     +  A +  E  + E+     L+  L   EG+ +  +    G   +++     
Sbjct: 341 DYVAAPDFSR-AELGWEM-TDEETRRRHLVQSLLQGEGVDLAAYRERFGSTPELDFPAEL 398

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             L  +G++      RL  +  G+   D+V   L 
Sbjct: 399 AELAARGWLADPAAGRLLLSPEGLAWSDAVGPRLF 433


>gi|332295055|ref|YP_004436978.1| HemN domain protein [Thermodesulfobium narugense DSM 14796]
 gi|332178158|gb|AEE13847.1| HemN domain protein [Thermodesulfobium narugense DSM 14796]
          Length = 375

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 103/399 (25%), Positives = 194/399 (48%), Gaps = 34/399 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K +S + ++      NSLG+Y+H PFC K+C YC F S   +     E F ++ L E+++
Sbjct: 3   KKISYFLDDFELNDDNSLGIYIHVPFCEKRCNYCHFFSRALKPNQ-IEKFFEALLFEIEY 61

Query: 62  M----RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                R L     + SI+FGGGTPS+++P+ +  ++  +   + +  N EIT+EA+P S 
Sbjct: 62  YEKIDRNLFERTFVDSIYFGGGTPSIVKPELLKSLIKILDSKFNLK-NPEITLEAHPKSF 120

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLI 176
            V N++       NR+SLGV S EE+ L  L R    +   +A+ LA+ +    ++ DL+
Sbjct: 121 -VENYRDKNDLFFNRLSLGVVSFEEKELLSLSR---ENFGYSALILAKELGIENVNVDLL 176

Query: 177 YALPKQTMTQWEMELQRALSY-AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             +P Q +  ++  L     +  V  +S+Y L               D V P + + ++L
Sbjct: 177 IGIPGQNLISFKKSLNIVCQFDNVKGISIYPLE-------------ADFVEP-DEIVLEL 222

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
            + ++      G   YEI+N +       HNL YW+Y +++  GP + S++     + + 
Sbjct: 223 MSYSEEYLDKMGYLRYEIANWAKSDFFCRHNLKYWKYMNFLSFGPSSSSKIGKRRFKRSS 282

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +++ + +           ++ E   LS +    E +MMG RL EGI V + +      L 
Sbjct: 283 NLDDYLDK--------KFSLEEDIELSEKDLFFEKIMMGFRLMEGIKVSELKNKFDERLV 334

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +    +++   + +++  R+  T++G+  +++ +  L 
Sbjct: 335 EDFLIKIKKFDELVKIEKDRVFLTRKGIIFMNNFLVELM 373


>gi|268680003|ref|YP_003304434.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268618034|gb|ACZ12399.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 351

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 158/343 (46%), Gaps = 24/343 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFGGG 79
           Y+H PFC  KCPYC FNS+  + K+ Q  ++Q  + ++++  +        I+S+F GGG
Sbjct: 4   YMHIPFCDSKCPYCAFNSYTNQSKLKQ-TYMQRLIEQLRFELEKFNVQKGEINSLFIGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS I     A + + ++    +S   E+T EANP S       G ++ G+NR+S GVQS
Sbjct: 63  TPSTIPASWYAPLFEMLSPY--LSKEAELTSEANPHSATQAWIAGMKELGINRLSFGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+FLGRNH+   A  AI  A ++    +S DL+Y     T      +L+ A    
Sbjct: 121 FNTEKLQFLGRNHSPKMAEEAIINAHHLGIQNISLDLMYGTALDTPHLLREDLKYARMLP 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++HLS Y LT+E+ T FY             +         Q I    G   YEISN   
Sbjct: 181 INHLSAYALTLEEETPFYTQKN------VINSEEALARTFVQEII-DAGFPQYEISNFG- 232

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
              ES HN  YW + DY+G+G GA   +       A  +E + ++               
Sbjct: 233 -SYESYHNKGYWEHQDYLGLGAGAVGFLHHQRFYPAKKVEDYLQN---------PCYQAI 282

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
           E LS E+   E + +GLR   GI           N+ +  + N
Sbjct: 283 EELSIEELHVEKIFLGLRSCVGIDRTILNAKEEENVALLLQEN 325


>gi|225164663|ref|ZP_03726903.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
 gi|224800722|gb|EEG19078.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
          Length = 311

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 91/300 (30%), Positives = 138/300 (46%), Gaps = 20/300 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Q   SLG+Y+H PFC + C +C F       +  ++ ++Q+   E   +      + IS+
Sbjct: 12  QNGGSLGLYIHVPFCARTCDFCAFYQESPTAQSIRD-YLQTLPREAALV---EWDQPIST 67

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--------------EITIEANPSSVEV 119
           IFFGGGTP L+ P+++  +   +      +++               E ++E  P SV  
Sbjct: 68  IFFGGGTPGLLSPRDLDTLCGIVHDICERAAHAASPPPPAATPTSPAEWSVEMAPGSVTT 127

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
                 R AGV RIS+G QS +   L  LGR H   +   A    R   F  ++ D+++A
Sbjct: 128 ERLAVLRDAGVTRISMGAQSFQPALLDALGRQHTREQVFRAYDRVRAAGFASVNIDMMFA 187

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q  T W  +L++A++ A DHLS Y LT E+ T  +       + L        LY  
Sbjct: 188 LPGQDETAWIADLEQAIALAPDHLSTYCLTFEEDTKLWVKLSQSKVKL-DPEHEARLYET 246

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           T +  +  G   YEISN +  G   LHNLN WR   + G+GP A S+           + 
Sbjct: 247 TWARLAQAGYAQYEISNFARPGHACLHNLNTWRMHTWAGLGPAAASQHAGWRGANIADLT 306


>gi|237752345|ref|ZP_04582825.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229375834|gb|EEO25925.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 453

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 81/408 (19%), Positives = 159/408 (38%), Gaps = 32/408 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL    ++     +N L +YVH PFC   C +C  N      +  +  +++    E+  +
Sbjct: 35  YLQDLRSD-----TNPLSLYVHLPFCRSACYFCGCNVIYTSKEENKILYLEYLKKELALL 89

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVN 120
                  + I  + FGGGTP+      +  ++  + K     S + EI  E +P    + 
Sbjct: 90  ENAMDTQKPIYQLHFGGGTPTFFSASELEFLIALLKKTFPNFSDDAEIACEIDPRFFSLE 149

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
             +  +  G NR+S G+Q  +E   R + R    S    +I++ARN     ++FDLIY L
Sbjct: 150 QMRALKNGGFNRLSFGIQDFDENVQRAIHRIQPFSLVQDSINIARNFGVTSINFDLIYGL 209

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+  ++  L+ AL    D  +++        +   M K  +  LP+    + +   +
Sbjct: 210 PFQTLDTFKNTLELALKLNPDRFAIFNYAHVP-WIKKTMRKIDETTLPAPEEKLKILEFS 268

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G     + + +    E            N+  Y        +GIG    + + 
Sbjct: 269 IQFLQEKGYKMIGMDHFAKPDDELFKSISKGQLRRNFQGYSTKGGTQTVGIGL---TSIG 325

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            GS   A + +   E +   +        +   L+++ +  + ++M L     ++    E
Sbjct: 326 EGSDYYAQNFKTMLE-YQNALDNGILPFQKGVKLNADDKLRKTVIMQLMSNFRLNFHAIE 384

Query: 348 MLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                N        +E  + L+  G I   +   ++ +Q GM ++ ++
Sbjct: 385 SQFKINFTSYFADALEALKPLENAGLIALNKDE-IQVSQTGMLLIRNI 431


>gi|27383420|ref|NP_774949.1| hypothetical protein bll8309 [Bradyrhizobium japonicum USDA 110]
 gi|27356595|dbj|BAC53574.1| bll8309 [Bradyrhizobium japonicum USDA 110]
          Length = 443

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 88/400 (22%), Positives = 157/400 (39%), Gaps = 27/400 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           + S+ +Y H PFC + C +C F   +       E ++ +   EM W        +I + F
Sbjct: 14  APSIDLYFHIPFCHQNCTFCHFGKEINPPPRRVERYLAALDKEMSWSDAALAGSAIETAF 73

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVN 131
            GGGTPS +    +  +   I K + +S N E++ E +PS  +     +      K GVN
Sbjct: 74  IGGGTPSFLTNNQLKALFGMIGKRFDLS-NSEVSFELHPSLAKQADAADRISTLLKGGVN 132

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R  LGVQ+L+   LR L R H   E +  + L + +    +S DL+Y LP+QT+  W   
Sbjct: 133 RFVLGVQTLDRDILRILNRGHGVDEVMQTVKLLKGMGVENLSLDLMYGLPQQTLRSWYGS 192

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L   V+  +++ L  +      +    G          V ++ + + + ++ G   
Sbjct: 193 LIGLLDMEVEKFNIFPLMFKSTDPIARHLARGRYQFAGAKERVMMHFMAEHMLTSLGYRH 252

Query: 251 YEISNHSFL--GAESLHNLNY--WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
             I   + +           Y  W   + +  G      +        + +++    +L 
Sbjct: 253 GPIFYWTKMSQPHSFQQARKYDSWNDNNLVPFGVSGFGFMSECQFYNEVDLDR----YLS 308

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQ 363
            V      V +   LS +      LM  LR   G+ +  +E   G +L++   R    L+
Sbjct: 309 RVEAGEKPVWKGVVLSQDDLMRRTLMFALR-SSGVLLSRFEREFGVSLEVYFARELRALK 367

Query: 364 RQGFIERVQFSRLRCTQRG---------MTMLDSVIANLA 394
             G I   +   L  T  G         +   ++V+  +A
Sbjct: 368 EAGLICISKDGVLSLTDAGTINSGAVSLLFFSNNVLEQVA 407


>gi|15611677|ref|NP_223328.1| coproporphyrinogen III oxidase [Helicobacter pylori J99]
 gi|11386870|sp|Q9ZLH0|HEMN_HELPJ RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|4155149|gb|AAD06178.1| OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE [Helicobacter
           pylori J99]
          Length = 457

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKVRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPPQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDLEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKEGFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKANYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     LS E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHYYEKALDLGHLPVERGVALSQEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|297379865|gb|ADI34752.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           pylori v225d]
          Length = 457

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 137/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R ++   +GGGTP+   P  +  I   I +     S  +E++ E +P     ++ 
Sbjct: 99  AMDTNREVAQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQEIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +    N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVALTKEDVLRKEVIMQMMSNLKLDYSKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|241761676|ref|ZP_04759763.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241373984|gb|EER63517.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 453

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 78/405 (19%), Positives = 154/405 (38%), Gaps = 30/405 (7%)

Query: 5   SAYENNMTGQ----------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           + + N++T +            + + VY+H PFC + C YC  ++ V R +     ++ +
Sbjct: 32  ADFRNDLTPKEHAIRIKNIAPDSRISVYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDT 91

Query: 55  FLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            + E++ +  L      I  + +GGGTPS+I  + I  ++  + + +  + ++   +E +
Sbjct: 92  LVKEIETVGNLAPNHLKIGHLSWGGGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELD 151

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MS 172
           P  ++    Q     G+NR SLGVQ       + +GR     +   AI   R      ++
Sbjct: 152 PRLLDAEFAQNLFDIGINRTSLGVQDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVN 211

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL+Y LP Q + +  +  Q  L  + D ++ +                 +  LP     
Sbjct: 212 FDLLYGLPHQGLDEIRLNCQETLRLSPDRIACFGYAHLPE-RKANQKLIDESALPQTKER 270

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYGD-----YIGIGP 280
            +   L   I   +G  A  I + +           E     N+  Y        IG+G 
Sbjct: 271 FEQAALIAEILQQNGYQAIGIDHFAKTDDLLAVAAWEKKLRRNFQGYTTDNEPVLIGLGA 330

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A S          I      +++ + + + G A      +S E      ++  L     
Sbjct: 331 SAISTFSDA----YIQNIADIKNYSRAIEEQGLASFRGIDISQEDHLRGEIISALMCHFA 386

Query: 341 ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           + +  ++       +     +L+ +G I + Q +R+  T  G   
Sbjct: 387 VDLTPYDKSLSLEDEKRELSHLEEEGLI-QFQQNRIEMTDAGRPF 430


>gi|158604993|gb|ABW74805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter concisus 13826]
          Length = 348

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 105/349 (30%), Positives = 156/349 (44%), Gaps = 25/349 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           VY+H PFC  KCPYC F S    +      + ++   ++ +  +    + IS+IFFGGGT
Sbjct: 3   VYIHVPFCQSKCPYCAFGSSDDEFS-KVSAYFKALCFDLNFQLKSQNVKEISTIFFGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +  +    I   +A   T     EIT EANP+S  +   +  +  G NRIS G QS 
Sbjct: 62  PSAVNAKFYDEIFSILAPLCT--PKTEITFEANPNSANLAWLKHVKNLGANRISFGAQSF 119

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E  L+FLGR H+  +   A+  A    F  ++ DLIY     T  +   E +   S A+
Sbjct: 120 FEDKLKFLGRIHSREQIFKAVENAHAAGFKSINLDLIYDTKFDTKKRLLAETENLKSLAI 179

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            HLS Y LT+E+ T F              +       + + I    G   YEISN    
Sbjct: 180 THLSAYSLTLEENTPFSGKKSYKK------DSDTLAKFMIEQI-GRAGFKQYEISNF--- 229

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           G    HNL YW+  +Y+G+G  +        +    SI+ +       + +  H   E+E
Sbjct: 230 GEICKHNLGYWQGKNYLGVGAFSVGFKDATRYYAKSSIDAY-------ITQPTH--RERE 280

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDW--EMLAGRNLDIECERNLQRQG 366
            LS  + A E + +GLR   G+             NL +E E+ L ++G
Sbjct: 281 ILSPSELAREHIFLGLRSIVGVEAGRLNEAQKKRANLLVENEKLLFKEG 329


>gi|116072312|ref|ZP_01469579.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. BL107]
 gi|116064834|gb|EAU70593.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Synechococcus sp. BL107]
          Length = 347

 Score =  232 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 105/329 (31%), Positives = 167/329 (50%), Gaps = 17/329 (5%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPSL+ P  IA +LD +   + +    EIT+E +P+S + +  +     GVNRI
Sbjct: 1   MYFGGGTPSLLSPDQIADLLDQLRLRYGLQEGAEITLEMDPASFDQHQLKKVLALGVNRI 60

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-----MSFDLIYALPKQTMTQWE 188
           SLG QS ++  L  LGR H A + + A     + +        S DLI +LP QT+  WE
Sbjct: 61  SLGGQSFDDSVLEQLGRRHRAKDLLEACEWMDDAYRSGELSSWSLDLIQSLPGQTLAGWE 120

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L RA++    H+S+Y L++E GT+F+     GDL LP ++V+ DL  LT +  S  GL
Sbjct: 121 HQLDRAIACGSPHISIYDLSVEPGTVFHHRLNQGDLALPDDDVSCDLMALTSARLSTAGL 180

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISNH+  G  S HN  YW    + G G GA S    G         +   +WL   
Sbjct: 181 RRYEISNHARPGHASRHNRVYWSGAGWWGFGMGATS-APWGQRIARPRTREAYAAWLDDH 239

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR-NLDIECERNLQRQGF 367
           R++   +     +  ++Q    L++GLR  EG+ +  + + + +     E      ++G 
Sbjct: 240 RESECGLG----VPLDEQ----LLVGLRREEGMDLGAFNLSSAQITALEERWAPFLKEGL 291

Query: 368 IERVQFSRLRC-TQRGMTMLDSVIANLAV 395
           ++R +  R       GM + + V+  + +
Sbjct: 292 MQR-RAGRWCLKDPEGMALSNRVLLEVVL 319


>gi|195953251|ref|YP_002121541.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
 gi|195932863|gb|ACG57563.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenobaculum
           sp. Y04AAS1]
          Length = 457

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 65/408 (15%), Positives = 155/408 (37%), Gaps = 30/408 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y    E+ +  +    L +Y+H PFC   C +C  N  +       + ++     E+  +
Sbjct: 39  YKKELEDILHDE--RPLSLYIHIPFCENACWFCGCNVIISHRTDVAKPYLNYLFKEVDML 96

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           + +    + I     GGGTP+ ++ ++   ++  I   +  +   E++IE +P  ++   
Sbjct: 97  KDVLKDYKKIDQFHIGGGTPNFLDNEDFYNMMSFIKDRFDFTEEPEVSIEIDPRHIDYKK 156

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALP 180
            + Y++ G NRIS+G+Q  +      + R  +       I  +    +  ++ DL+Y LP
Sbjct: 157 LKLYKELGFNRISMGIQDFDRNVQERINRVQDEELLKNVIYDIRSLGYKSLNIDLMYGLP 216

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLT 239
            QT+  ++  +++ + ++ D ++++            + +  D   LP  ++ +D+  L 
Sbjct: 217 GQTVDTFKSTIEKTIEFSPDRVAVFNFAYVP--WLKPLQRKIDATTLPEASIKLDMLKLA 274

Query: 240 QSITSAHGLHAYEISNHSFLGAE----SLHN---LNYWRYGD-----YIGIGPGAHSRVK 287
             +  A       + + +    +      H     N+  Y        IGIG  +   + 
Sbjct: 275 IELFEASDYAFIGMDHFAKKTDDLYLAQKHRKLWRNFQGYTTRKGVHLIGIGATSIGMLD 334

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      K    +   + K    ++    L+ +      ++M +     +  KD  
Sbjct: 335 ----KAYFQNHKTLRDYYSALDKGVFPIMRGYILNQDDIIRREVIMDIMCNLYVDKKDIA 390

Query: 348 MLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                + D+           L+  G I  +   ++     G  ++ ++
Sbjct: 391 SRFSIDFDLYFEKELLELEELEEDGLIS-INEDKIEVNPEGRLLIRNI 437


>gi|311746224|ref|ZP_07720009.1| oxygen-independent coproporphyrinogen III oxidase [Algoriphagus sp.
           PR1]
 gi|126576454|gb|EAZ80732.1| oxygen-independent coproporphyrinogen III oxidase [Algoriphagus sp.
           PR1]
          Length = 452

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 79/396 (19%), Positives = 166/396 (41%), Gaps = 27/396 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISS 73
            S  + +Y+H PFC   C YC  N  + +    +  ++ S L E +   +L   +  ++ 
Sbjct: 49  KSKGITLYIHLPFCESLCTYCGCNKRITKNHEVEIPYLNSILLEWKRYLELFSEKPKLAG 108

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I  GGGTP+  +P +++  L  I  +  V  + E + E +P++  + + +   K G +R+
Sbjct: 109 IHLGGGTPTFFKPSSLSFFLQEILNSSEVMDDAEFSFEGHPNNTTLEHLEELHKLGFDRV 168

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  + +  + + R     +   A  +AR   +  ++FDLIY LP QT+       +
Sbjct: 169 SYGIQDFDMKVQQAIHRIQPFEKVQEATTIARQTGYQSVNFDLIYGLPHQTLDTLYTTFE 228

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +      D ++ Y           +     +  LP++N   +LY   ++     G     
Sbjct: 229 KVKMLRPDRIAFYSYAHLPSVFPAQK--SYESYLPNDNQKRELYEFGKANLIKIGYREIG 286

Query: 253 ISNHSFLG--------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +            ++LH  N+  Y        IG+G  + S +    H      EK
Sbjct: 287 MDHFALPNDPLYTAKTNDTLHR-NFMGYTTSPSKILIGLGASSISDI----HLAYAQNEK 341

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG--LRLREGISVKDWEMLAGRNLDIE 357
           + E++  M+  +  A  +   LS +      +++    + +  I +  WE L  + +   
Sbjct: 342 NIEAYQGMINNDSWAFQKGHLLSEKDIIVREIILDIICQHQAEIPLDIWESLNEKQI--F 399

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             + +Q +G +  +  S+L+   +G+ ++  +    
Sbjct: 400 NLKEMQWEGLLS-IDKSKLKVNSQGIAVIRHICMQF 434


>gi|153003140|ref|YP_001377465.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaeromyxobacter sp. Fw109-5]
 gi|152026713|gb|ABS24481.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaeromyxobacter sp. Fw109-5]
          Length = 379

 Score =  232 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 180/384 (46%), Gaps = 12/384 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +   G+YVH+P+C  +CPYCDF     R   G+  ++ + L E++         +  S++
Sbjct: 2   ARRFGIYVHFPYCAHRCPYCDFAVTTERPPEGR-RYLAALLAELELRAGAFDGLAPVSVY 60

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPSL +P  +A +L  +     + +  E+TIEANP S +    + +R AGVNR+S+
Sbjct: 61  LGGGTPSLWDPDEVAALLAALRARLALPAGAEVTIEANPESTDRARLRAWRAAGVNRVSV 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQS +   L  LGR H    A  AI  A      +S DLIY   + T+     +  RA 
Sbjct: 121 GVQSFDAGVLAKLGRRHGPDAAERAIREAAEELGNVSVDLIYGARRSTVEIARADAARAA 180

Query: 196 SYAVDHLSLYQLTIEKGTL-----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +    H+S Y LT++ G +       +M ++G L LPS++         ++     GL  
Sbjct: 181 ASGAAHVSAYALTLDPGIMAEEVPLARMRREGRLPLPSDDEVAAQAAAIRAALRRAGLRR 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN +  G ES HN  YW    Y+G+G GA+   +  +        +   ++L     
Sbjct: 241 YEISNFARPGLESAHNRLYWTAESYLGLGAGAYGCARGEAGSYRYGNLRDARAYLDAALG 300

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                 E++ ++   + +E +M+GLR  EG+ +     +  R  D    R L        
Sbjct: 301 RRSPTAEEDRIAPAAERNERMMLGLRTLEGVPLATLSPIQSREADRLVRRRLA------V 354

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            +   L  T RGM +  S+   L 
Sbjct: 355 RRRGALVLTSRGMDLHTSIAERLL 378


>gi|257437829|ref|ZP_05613584.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii A2-165]
 gi|257199752|gb|EEU98036.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium prausnitzii A2-165]
          Length = 331

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 162/349 (46%), Gaps = 25/349 (7%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            ++ + L E+             +I+FGGGTPSL+ P +       +      +   EIT
Sbjct: 4   QYVDALLRELARFAPEAPLHP-DTIYFGGGTPSLLSPAD----AARLIAAAAPAPGAEIT 58

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IF 168
           +EANP +V      G+R+AGVNRIS GVQS  +  L+ LGR H A +A AA   AR   F
Sbjct: 59  LEANPETVTEQTLCGFREAGVNRISFGVQSARDSQLKTLGRPHTARQARAAFAAARRAGF 118

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             +S D++ ALP  T  +++  L+        H+S Y L IE  + F +   +G   LPS
Sbjct: 119 TNISGDIMLALPHYTQAEFDETLELIAEGGATHISAYLLKIEPDSAFGRHPPEG---LPS 175

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
            + A D Y         HG   YEISN +  G E  HNL YW  GDY+G+GP AHS +  
Sbjct: 176 PDEAADFYLYAVEHLEHHGYRQYEISNFAKPGYEGRHNLIYWDCGDYLGLGPAAHSCMGG 235

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                    E         V   G              A+++L++ LRLR+G+ +  ++ 
Sbjct: 236 RRFYYPSDTEAFLNDKAAPVMDGGCG------------AEDYLILQLRLRKGLDLAAYKA 283

Query: 349 LAGRNLD---IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
             G+      +   +N  + G+      S L  T  G+ + +S++A L 
Sbjct: 284 RYGKEFSTAQLAFVKNCVKSGY-ATFDGSTLALTPAGLIVQNSILAELL 331


>gi|291277208|ref|YP_003516980.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           mustelae 12198]
 gi|290964402|emb|CBG40252.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           mustelae 12198]
          Length = 457

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 75/383 (19%), Positives = 144/383 (37%), Gaps = 22/383 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            L +YVH PFC   C +C  N      +  +  ++     E++ +RQ +   R +  + F
Sbjct: 49  PLSLYVHLPFCRSACYFCACNVIYTNSEEKKVRYLTYLRKELELIRQSMDTKREVVQLHF 108

Query: 77  GGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GGGTP+    + +  ++  I +     SS+ E++ E +P     +     +  G NR+S 
Sbjct: 109 GGGTPTYFSAKQLEEVIAMIREVFVNFSSDAEVSCEIDPRHFTEDQMIVLKNGGFNRVSF 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +E+    + R  +       + +AR      ++FDLIY LP Q++++++  LQ+A
Sbjct: 169 GVQDFDERVQAAVNRFQSMELMQEVVEIARKHGITSINFDLIYGLPHQSLSRFQETLQKA 228

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +S   D  +++        +   M    +  LPS    + +   T       G     + 
Sbjct: 229 VSLGPDRFAIFNYAHVP-WMKRTMGNIDEKTLPSAEEKLKILKHTIKFLENWGYKMIGMD 287

Query: 255 NHSFLGAE-------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + + +  E            N+  Y        IGIG  +                K   
Sbjct: 288 HFARMEDELYLASKKGELRRNFQGYTTRGFSQTIGIGLTSIG----EGVDYYTQNYKDMH 343

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           S+   + +    V     L  +    + ++M L     +  +  E     +      + L
Sbjct: 344 SYESALDRGMLPVERGIVLGFDDILRKEVIMELMNNSRLYFQRIEEKFFIDFGEYFAKEL 403

Query: 363 QRQGFIERVQFSRLRCTQRGMTM 385
                 E V+   L    +G+ +
Sbjct: 404 LA--LQELVRDDLLEVNSQGIFV 424


>gi|28212117|ref|NP_783061.1| coproporphyrinogen III oxidase [Clostridium tetani E88]
 gi|28204560|gb|AAO36998.1| putative oxygen-independent coproporphyrogen III oxidase
           [Clostridium tetani E88]
          Length = 439

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 84/390 (21%), Positives = 177/390 (45%), Gaps = 22/390 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             + S++L +Y+H PFC+ KC YC+  S     K     ++   + E++ ++ +   R  
Sbjct: 40  ENRKSDNLTLYIHIPFCLNKCGYCNLFSTTDFNKDKMSKYVNKLIEEIKAVKNILDLRKE 99

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
               S+ FGGGTP+ +    +  +L  I K+  +    +  ++E +P+++        +K
Sbjct: 100 SVFYSVIFGGGTPTALPKDLMEKLLIVIEKDLNIDFKKIFFSMETSPNTMNKEYIDLLKK 159

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQ 186
             +NRIS+G+QS +E  L+ + R    +    ++ L +     + + DLIY +P Q+M  
Sbjct: 160 FHINRISMGIQSFKECELKEICRFETVNNINKSLELMKKENIEIKNLDLIYGIPSQSMES 219

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L+R + Y  + + +Y L I + T  Y+ +K         N   ++Y L +     +
Sbjct: 220 FMDSLKRVIEYRPEEIFIYPLYIREKTKLYEKYKR------DFNKMTNMYELAKDELIKN 273

Query: 247 GLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-----RVAISIEKH 300
           G     + N       E L+     +  + IGIG GA S +    +         +I   
Sbjct: 274 GYIQTSMRNFIREDMNEKLYPSYSCQENEMIGIGCGARSYISNIHYSIKYAVNQSNINSI 333

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC-- 358
             ++LK   +N +       LS ++   ++++  +    G+ ++++     +N+  +   
Sbjct: 334 INNYLK--EENLYYATYGYILSEDEIKRKYILKSILKVTGLDLEEYFKRFNKNIFDDFNE 391

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
              L  +GF+ + + +R+  T++G+   D+
Sbjct: 392 INLLIDKGFLIK-KGTRVYPTEKGLKYSDA 420


>gi|313115247|ref|ZP_07800727.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622440|gb|EFQ05915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 326

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 168/347 (48%), Gaps = 25/347 (7%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + + L E+        P    +++FGGGTPSL+ P+    ++D            EIT+E
Sbjct: 1   MDALLRELSRFAP-EAPLQPDTLYFGGGTPSLLRPEQAKRLIDAARP----MPGAEITLE 55

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPR 170
           ANP +V   +  G+R+AGVNRIS GVQS  +  LR LGR H A +A AA   A+   F  
Sbjct: 56  ANPETVTEESLAGFREAGVNRISFGVQSARDTQLRTLGRPHTAKQARAAFAAAQRAGFTN 115

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           +S D++ ALP  T  +++  L+        H+S Y L IE  + F K   +G   LP+ +
Sbjct: 116 ISGDIMLALPHYTEAEFDETLELIEGGGATHISAYLLKIEPDSAFGKHPPEG---LPTGD 172

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
            A D Y         HG   YEISN +  G E  HNL YW  GDY+G+GP AHS +    
Sbjct: 173 EAADFYLYAVEQLEHHGYKQYEISNFAKPGYEGRHNLIYWDCGDYLGLGPAAHSCMGGRR 232

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                    +P      +      V++         A+++L++ LRLR+G+S+  ++ + 
Sbjct: 233 FY-------YPPDTAAFLNDAAAPVMDGSC-----GAEDYLILQLRLRKGLSLDAYKKIY 280

Query: 351 GRNLD---IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G+      +   +N  R G+        L  T  G+ + +S++A L 
Sbjct: 281 GKEFSTAQLAFVQNCVRAGY-ASFDGRTLALTPAGLIVQNSILAQLL 326


>gi|217033705|ref|ZP_03439132.1| hypothetical protein HP9810_5g47 [Helicobacter pylori 98-10]
 gi|216943894|gb|EEC23331.1| hypothetical protein HP9810_5g47 [Helicobacter pylori 98-10]
          Length = 457

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 138/375 (36%), Gaps = 20/375 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +C  +      +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDHLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S N+E++ E +P     ++ 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPTQLDEITQSIQEVFPNFSQNIEMSCEIDPRHFTKDHM 158

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G NR+S GVQ  + +  + + R         ++ LAR+     ++FDLIY LP 
Sbjct: 159 QTLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQESVKLARDYGIKSINFDLIYGLPN 218

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   L+  L    D L+++        +   M K  + +LPS    +++     S
Sbjct: 219 QTKESFLKTLELVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPRDKLEILESLIS 277

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVG 289
                      + + +    E       +  + N+  Y        IGIG  +       
Sbjct: 278 FLEKAHYQMIGMDHFAKSDNELYLALQKAQLHRNFQGYTTKKFTQTIGIGVTSIG----E 333

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                    K    + K +      V     L+ E    + ++M +     +     E  
Sbjct: 334 GSDYYTQNYKDLHHYEKALDLGHLPVERGVILTKEDVLRKEVIMQMMSNLKLDYYKIEEK 393

Query: 350 AGRNLDIECERNLQR 364
              +     ++ L++
Sbjct: 394 FSIDFKAHFKKELEK 408


>gi|213852341|ref|ZP_03381873.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 305

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 2/259 (0%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39  AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQT 183
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DLIY LPKQT
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDLIYGLPKQT 218

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       TLF    K  D  LPS    +D+   T    
Sbjct: 219 PESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDILQETIVSL 277

Query: 244 SAHGLHAYEISNHSFLGAE 262
           +  G     + + +    E
Sbjct: 278 TQAGYQFIGMDHFARPDDE 296


>gi|149194489|ref|ZP_01871585.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
 gi|149135233|gb|EDM23713.1| coproporphyrinogen III oxidase [Caminibacter mediatlanticus TB-2]
          Length = 392

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 101/394 (25%), Positives = 173/394 (43%), Gaps = 53/394 (13%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+     + +E +  +  T+++    +       ++F GGGT
Sbjct: 25  LYIHIPFCDSKCHYCAFNSYTNLNHLKKE-YFNAIKTQIEN--DINKSIQFKTLFIGGGT 81

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS ++      ++  +   + +   +E+TIE NP +V +   +  +  G NRIS GVQS 
Sbjct: 82  PSTMKIDFYEKLMKLLE--YNLKDAIELTIECNP-NVTIEWLKEIKNLGFNRISFGVQSF 138

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +E+ L+FL RNH+  +AI +I  A+   F  ++ DLIY+         E +L+   S  +
Sbjct: 139 DEEKLKFLNRNHSPIQAIHSIENAQKVGFENINLDLIYSTSLDNNKLLENDLKTTFSLPI 198

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            H+S Y L IE+ T   K   D       EN+ +      +          YEISN    
Sbjct: 199 THISAYSLMIEENT---KWEGDYSKRKYDENLEIWFIEKIKE-----KFPQYEISNF--- 247

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK-------------------- 299
           G   +HNL YW+  +YIGIG GA   +++ + +  +  E+                    
Sbjct: 248 GKPCIHNLGYWKLNEYIGIGAGAVGFLQMENGKWKMENEELRKQISNKQSINLLSFRYYT 307

Query: 300 --HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
             +   +LK   K  +     E L+ E    E + +GLR   G     +E     N +  
Sbjct: 308 QNNVYEYLKNPCKYKY-----EMLTDEDIKKEKIFLGLRSIIG-----FEENILNNKEKT 357

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             ++L  +  + + +            + D++ +
Sbjct: 358 RVKHLIEENKLYKKENRIYSLD---FLLADAITS 388


>gi|258543608|ref|YP_003189041.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634686|dbj|BAI00662.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637742|dbj|BAI03711.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640796|dbj|BAI06758.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643851|dbj|BAI09806.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646906|dbj|BAI12854.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649959|dbj|BAI15900.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652949|dbj|BAI18883.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656003|dbj|BAI21930.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 461

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 83/404 (20%), Positives = 158/404 (39%), Gaps = 26/404 (6%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A   N        + +Y H PFC + C +C  N+ V R++ G+  +      EM+ +
Sbjct: 41  WLKALPEN------EPVSLYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRI 94

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L G  R++  + FGGGTP+ + P ++  I+  I   + V    E+ +E +P  V  + 
Sbjct: 95  VALVGEQRTVRHVQFGGGTPTTLPPHSLRQIMRSIRTFFQVDPQAELAMELDPRHVPQDY 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
                  G  RISLGVQ LE +     GR+ +  +  A+I  AR+     ++ DLIY LP
Sbjct: 155 PALLGDLGFTRISLGVQDLEPRVQEACGRHQSFEQTQASIQAARDAGVSGVNIDLIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+        +  S   D L+++           +     +  LP     +       
Sbjct: 215 YQTVESVGATALKIASLRPDRLAVFGYAHVP-WKQKRQRLIPEASLPKSEERLAQRAEID 273

Query: 241 SITSAHGLHAYEISNHSFLG--------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
            +  A G     + +++           A +LH  N+  Y        +G+G  A S + 
Sbjct: 274 RVLQAQGYRPIGLDHYALPEDGLAQAAQAGTLHR-NFQGYTTDPCPVLLGMGASAISMLP 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +   S+  +  +  +    +   V      + + +    ++  +     + +    
Sbjct: 333 AGFAQNITSVAAYARAMAE--NSDSLPVARGVAFTEDDKLRGAIIERIMCDMAVDLAVVG 390

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                + ++     L++ G + ++   +L  T  G   +  V A
Sbjct: 391 QGCDFSEELAQLHPLEQDGLV-KIAGQKLSVTVFGRPFVRHVAA 433


>gi|154148889|ref|YP_001406558.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
 gi|153804898|gb|ABS51905.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter hominis ATCC BAA-381]
          Length = 344

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 102/372 (27%), Positives = 160/372 (43%), Gaps = 35/372 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +Y+H PFC  KC YC F S   ++ +  + + ++ + E+           IS++F GG
Sbjct: 1   MHIYIHIPFCESKCKYCAFGSFSDKFDLVND-YFKALVLEI---SHFNFDEKISTLFIGG 56

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS++E +  A + + +  +    +  EI+IEANP+S  +   +  R  GVNRIS G Q
Sbjct: 57  GTPSVVEAKFYAPVFEILRPH--FKNLTEISIEANPNSANLKWLKEMRNLGVNRISFGAQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L+FLGR H+A +   A+  A    F  ++ DLIY     T    + EL+   + 
Sbjct: 115 SFNDEKLKFLGRIHSAKQIENAVQNAKIAGFDNINIDLIYDTKFDTKDNLKFELKNISNL 174

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + H+S Y L +EKGT FY                           +  G   YEISN  
Sbjct: 175 KISHISAYSLILEKGTEFYGKKSYKKDSSVLAGFLFKN-------LAEIGFKQYEISNF- 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HN +YW+  DY G G  A   +                S+LK   K       
Sbjct: 227 --GRICEHNFSYWKGEDYAGFGAYAVGTINKTRK-----TSPDLFSYLKNPLKK-----S 274

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
            E L+ +    E +++G+R   G S K          +++    L + G I   +  R  
Sbjct: 275 IEILNDKDIKTERILLGMRSSVGFSRKILNEK-----ELKKAEILLQSGKI-LFKNGRFY 328

Query: 378 CTQRGMTMLDSV 389
            T     + D +
Sbjct: 329 NTN--FLLADEI 338


>gi|333030130|ref|ZP_08458191.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
 gi|332740727|gb|EGJ71209.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides
           coprosuis DSM 18011]
          Length = 455

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 80/415 (19%), Positives = 154/415 (37%), Gaps = 30/415 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A E +     S  +  Y+H PFC   C YC  NS     +   + ++++   E++ 
Sbjct: 33  DYLKAIELSNHANPS-HISFYLHIPFCRHLCHYCGCNSFPMMKQENIDRYVRAIFKEIEM 91

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           ++ L    R I+ I +GGGTP+++    +  I D +   +    + EI IE +P  ++  
Sbjct: 92  VKPLLNKNRKIAQIHYGGGTPTVLPVSVLKEINDRLLDGFETIQSPEIAIECHPGYLDEK 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            +Q    A  NR SLG+Q  +EQ L+   R  +         + R    +++ D IY LP
Sbjct: 152 YWQDLTGAHFNRFSLGIQDFDEQVLKTANRRPSLIPVEHIFQILREADAKINMDFIYGLP 211

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+  +   + +A+    D L  +        +  +        LP       L+    
Sbjct: 212 LQTVESFSNTISKAIELNPDRLVTFSYAHVP-WVSKRQLILEKAGLPDSETKKALFEQAS 270

Query: 241 SITSAHGLHAYEISNHSFLG---AESLH----NLNYWRY------GDYIGIGPGAHSRVK 287
            + +        + +         ++LH    + N+  Y      G     G     ++ 
Sbjct: 271 KLLADAHYLPVGMDHFVRKEDELYQALHAKQLHRNFQGYCTRRTTGQVYAFGVTGIGQLN 330

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                  I   K  + +++++      + +   L+ E+Q    ++  L     I  ++  
Sbjct: 331 SA----YIQNVKTIQEYMEVIESGNLPIAKGYTLTDEEQITRAVIESLMCNYAIYWEELS 386

Query: 348 MLAGRNLDIECER---------NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                  D   +            Q  G I   +   +  T +G   + +V A+L
Sbjct: 387 THLQLEKDEILKAIRYKESELLAFQEDGLIHFSEQG-IEMTPKGKLFVRNVAASL 440


>gi|260463626|ref|ZP_05811824.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259030480|gb|EEW31758.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 449

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/351 (20%), Positives = 143/351 (40%), Gaps = 21/351 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
           + + +Y+H P+C K C +C  ++   R+      +++S   E+  +  L   +  + ++ 
Sbjct: 45  DEISLYLHIPYCDKLCWFCACHTKQTRHYEPVTKYLRSLHAEIATVSSLAEGKGRVRAVH 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P++++PQ++  +   +  +++     +I++E  P+ ++        + G+ R SL
Sbjct: 105 FGGGSPTMLKPQDMVALGAVLRNSFSFLPGAKISVEIEPNDMDEARLDALAEIGMTRASL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +  + + R     +    +   R+     ++ DL+Y LP QT       + +A
Sbjct: 165 GVQDFDPKVQKAINREQTFLQTKTVVDGVRSRGVESVNLDLLYGLPHQTGESVLSTVMQA 224

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L+   D ++L+         F K     D   LP          L        G  A  +
Sbjct: 225 LTLEPDRIALFGYAHVP--WFKKHQTMIDEAWLPGPEERFAQSQLAARAILDQGYEAIGL 282

Query: 254 SNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +  G          +   N+  Y +      IG+GP + S+ + G  +   S     
Sbjct: 283 DHFAKPGDALALAAHAGMLRRNFQGYTEDRCETLIGLGPSSISQFRQGYVQNMPST---- 338

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
             + +MV   G A V     S + +A  +++  L    G S  D     G 
Sbjct: 339 AEYGRMVDDGGLASVRGIAFSDDDRARGWIIERLMCDSGFSAIDLVERFGE 389


>gi|149916431|ref|ZP_01904950.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
 gi|149809701|gb|EDM69555.1| coproporphyrinogen III oxidase [Roseobacter sp. AzwK-3b]
          Length = 442

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 146/394 (37%), Gaps = 26/394 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   +       ++++   E+Q + + L     +S + +G
Sbjct: 42  ISLYVHVPFCRRLCWFCACRTQGTQTDKPVIAYLETLKAELQMLGKHLPRGVQLSRLHWG 101

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L++P  +  + + I K    +   E ++E +P+ ++         AG+NR S+GV
Sbjct: 102 GGTPTLLQPSMMQDLAEAIKKIAPFTDETEFSVEIDPNEIDGPRLDALAAAGMNRASIGV 161

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   +     +GR         A    R      ++ D++Y LP Q+  +    +Q+ LS
Sbjct: 162 QDFNDDIQHSIGRLQGYDITKWAADEIRARGVASLNADILYGLPHQSKARITESVQKLLS 221

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D ++LY        +  +        LP+    ++LY   + +          I + 
Sbjct: 222 LNPDRVALYGYAHVP-WMAKRQQMLPSDALPTPEERLELYETARRLFLWDNYAEIGIDHF 280

Query: 257 S-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           +                 N+  Y D      IG+G  + S+   G  + A +   H    
Sbjct: 281 ATQDDGLTIALKAGRLRRNFQGYTDDTADVLIGVGASSISKFPQGFAQNAPATGAHTG-- 338

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +R+   +       S E +    ++  L     I   +     G +   +  R +  
Sbjct: 339 --AIREGQFSTARGHAFSDEDRLRSRMIEQLMCEFRIDAAEMSDSFGVS--PQRVRKMLE 394

Query: 365 QG-----FIERVQFSRLRCTQRGMTMLDSVIANL 393
            G      + +V  + L        +   +  + 
Sbjct: 395 AGAAPFKGLVKVDDNGLFVPPEARPLTRMIARSF 428


>gi|330443887|ref|YP_004376873.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pecorum E58]
 gi|328806997|gb|AEB41170.1| oxygen-independent coproporphyrinogen III oxidase [Chlamydophila
           pecorum E58]
          Length = 464

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 92/401 (22%), Positives = 161/401 (40%), Gaps = 28/401 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISS 73
               L +Y H PFC   C YC     + R +   E++I + L E+  + Q  G +  +S 
Sbjct: 53  SPQPLSLYFHIPFCQSMCLYCGCTVILNRREEIVEDYINTLLQEISLISQELGMKFPVSR 112

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVN 131
           I FGGGTPS +       +   + K + +S   EI IE +P S+  ++   + ++  G N
Sbjct: 113 IHFGGGTPSRLSRYMFEKLFHQLHKCFDLSQTEEIAIEIDPRSLRNDMEKAEFFQNLGFN 172

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R     E+       +   F  ++ DLIY LPKQT   +   
Sbjct: 173 RVSLGVQDTQAAVQEAVKRRQTHEESRRVYEKFKELGFTSINIDLIYGLPKQTRHTFAQT 232

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +Q  L+   D L+L+        +           LPS      +Y+ ++      G  A
Sbjct: 233 IQDILAMRPDRLALFSYAAVP-WIKPHQKAIKATDLPSMEEKFAIYSQSRHSLIKAGYQA 291

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + S        + HN     N+  Y      D IG+G  A S +      + +   
Sbjct: 292 IGMDHFSLPEDPLTVAFHNKTLIRNFQGYSLPPEEDLIGLGISATSFI----RGIYLQNT 347

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-- 356
           K  + + + +  +  A  + + LS +    ++++  L     I  +++  L G + D   
Sbjct: 348 KALDIYQEKILSHSLATEKSKELSKDDLIRKWVIHKLMCTFVIEKEEFFSLFGHSFDEYF 407

Query: 357 ----ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               E   +++R G I +   S L  T  G   +  +    
Sbjct: 408 SDSQERLLSMERTGLI-QNSSSFLTVTPLGELFVRVIATAF 447


>gi|126730268|ref|ZP_01746079.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
 gi|126709001|gb|EBA08056.1| coproporphyrinogen III oxidase [Sagittula stellata E-37]
          Length = 399

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 154/390 (39%), Gaps = 24/390 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFGGGT 80
           Y+H PFC + C +C   +         + ++++   E++ +R+ L     +S + +GGGT
Sbjct: 2   YLHVPFCRRLCWFCACRTQGTATAKPVDAYVETLKAELKLLRRALPAGVKLSRLHWGGGT 61

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+L+ P  ++ ++D I +    + + E ++E +P+ ++          G+NR S+GVQ  
Sbjct: 62  PTLLAPDMMSRLIDAIRETADFADHAEFSVEIDPNEIDAARLDVLAAGGMNRASIGVQDF 121

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + Q    +GR         A+ + R      ++ D+++ LP QT  +    +Q+ LS+A 
Sbjct: 122 DPQIQEAIGRPQGYDVTRHAVEMIRERGVASLNTDILFGLPHQTRARITETVQKLLSFAP 181

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D ++LY        +  +       +LP+    +DL+   + +    G     I + +  
Sbjct: 182 DRVALYGYAHVP-WMAKRQQMIPSDMLPTPQERLDLFETARRLFVWDGYAEIGIDHFAAP 240

Query: 260 G-----AESLH--NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
           G     A+       N+  Y D      IG+G  + SR   G  + A S      ++   
Sbjct: 241 GDGLAIAQKTGKLRRNFQGYTDDTSEVLIGLGASSISRFPQGYAQNAPSTS----AYTAA 296

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN----LDIECERNLQ 363
           +R    +         E +    L+  L     I   +     G +      I  + N  
Sbjct: 297 IRDGRFSTSRGHTFKGEDKLRGRLIEALMCDFRIDANEIVADYGVSREWLFRIFRDTNAA 356

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               +E  +   L   ++   +   +    
Sbjct: 357 FDNLLEVTEDG-LYLPEKTRPLTRMIARAF 385


>gi|329113785|ref|ZP_08242556.1| Oxygen-independent coproporphyrinogen-III oxidase [Acetobacter
           pomorum DM001]
 gi|326696795|gb|EGE48465.1| Oxygen-independent coproporphyrinogen-III oxidase [Acetobacter
           pomorum DM001]
          Length = 461

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 78/403 (19%), Positives = 152/403 (37%), Gaps = 24/403 (5%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A   N        + +Y H PFC + C +C  N+ V R++ G+  +      EM+ +
Sbjct: 41  WLKALPEN------EPVSLYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRI 94

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L G  R++  + FGGGTP+ + P  +  I+  I   +      E+ +E +P  V  + 
Sbjct: 95  VALVGEQRTVKHVQFGGGTPTTLPPHALRQIIRSIRTFFQFDPQAELAMELDPRHVPQDY 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
                  G  RISLGVQ LE +     GR+ +  +  A+I  AR      ++ DLIY LP
Sbjct: 155 PALLGDLGFTRISLGVQDLEPRVQEACGRHQSFEQTQASIQAARAAGVSGVNIDLIYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+        +  S   D L+++           +     +  LP  +  +       
Sbjct: 215 YQTVESVGATALKIASLRPDRLAVFGYAHVP-WKQKRQRLIPEASLPKSDERLAQRAEID 273

Query: 241 SITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
            +  A G     + +++               + N+  Y        +G+G  A S +  
Sbjct: 274 RVLQAQGYQPIGLDHYALPEDGLAKAAKAGALHRNFQGYTTDSCPVLLGMGASAISMLPA 333

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G  +   S+  +  +  +    +   VV     + + +    ++  +     + +     
Sbjct: 334 GFAQNITSVAAYARAMAE--NSDSLPVVRGVAFTEDDKLRGAIIERIMCDMAVDLAAVGQ 391

Query: 349 LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
               + ++   R  ++   + ++    +  T  G   +  V A
Sbjct: 392 GYDFSEELAQLRPFEQDELV-KIDGQNISVTAFGRPFVRHVAA 433


>gi|20803847|emb|CAD31425.1| PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE PROTEIN
           [Mesorhizobium loti R7A]
          Length = 449

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 148/365 (40%), Gaps = 27/365 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A E+       + + +Y+H P+C + C +C  ++   R      ++++S   E+  +
Sbjct: 37  WLKALES------GDEVSLYLHIPYCDRLCWFCACHTKQTRRYEPVASYLRSLHAEIATV 90

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L G +  + ++ FGGG+P++++P+++  +   +  ++   ++ +I++E  P+ ++   
Sbjct: 91  AGLVGSKAHVRAVHFGGGSPTMLKPEDMIALGTVLRDSFDFLADAKISVEIEPNDMDEAR 150

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALP 180
                + G+ R S+GVQ  + +  + + R  +  +  A +  +       ++ DL+Y LP
Sbjct: 151 LDTLAEIGMARASVGVQDFDPKVQKAINREQSFLQTKAVVDGIRSRGVGSVNLDLLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT       + +AL+   D ++L+         F K     D   LP        + + 
Sbjct: 211 HQTRESVCSTVAQALTLEPDRMALFGYAHVP--WFKKHQTMIDEAWLPGPAERFAQWQIA 268

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
             +    G  A  I + +                 N+  Y +      IG+G  + SR +
Sbjct: 269 ARLIMGAGYEAIGIDHFARPDDALAVSARAGTIRRNFQGYTEDRCETLIGLGSSSISRFR 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +   S       + +MV     A V     S + +   +++  L    G S  D  
Sbjct: 329 QGYSQNMPST----AEYRRMVEGGHLATVRGIAFSEDDRVRGWIIERLMCDFGFSAADLV 384

Query: 348 MLAGR 352
              G 
Sbjct: 385 ERFGE 389


>gi|86150670|ref|ZP_01068891.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596168|ref|ZP_01099405.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218562608|ref|YP_002344387.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85838851|gb|EAQ56119.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88191009|gb|EAQ94981.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112360314|emb|CAL35110.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315928351|gb|EFV07666.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 451

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 154/397 (38%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R  +      A++L        ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVILSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFKEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFVNFDENFIKVNETGVLLIRNI 429


>gi|237752699|ref|ZP_04583179.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376188|gb|EEO26279.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 360

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 166/355 (46%), Gaps = 21/355 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           +  L +Y+H PFC  KC YC FNS   +  + +  ++Q     + +  +    R  I+S+
Sbjct: 3   NKELSLYLHIPFCDSKCGYCAFNSKTNKNHL-KSIYMQKLAVYLHYKLESLQERVQITSV 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS++E      I +       +    EI+IEANP+ + +   +  R  GVNR+S
Sbjct: 62  YIGGGTPSVVESYLYENIFEEFLPF--LKKGAEISIEANPNHLSLEWLRAMRDYGVNRLS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQS   Q L FL R H       A+  A    F  +S DLIY  P       E EL+ 
Sbjct: 120 IGVQSFNAQKLAFLEREHKNKNTFLALDYAVKAGFDNLSIDLIYGTPLCDEALLEQELKT 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLH--A 250
           AL   + H+S Y L+++ G+ FY+   +       S +     +       +AH      
Sbjct: 180 ALGLPLSHISAYHLSLDPGSRFYREKEQIYKESQRSLDGDFGGFLSIGHFIAAHLQKFLH 239

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN+   G  SLHNL+YW  GDYIGIG GA   ++     +  S+ K  E +L+   +
Sbjct: 240 YEVSNY---GKASLHNLHYWSGGDYIGIGAGAVGCIQG----IRTSMPKSIEHFLEDFSE 292

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ 365
           +      KE L+ + +  E L +G R   G+  K         + ++     Q+ 
Sbjct: 293 S------KEILTQKDKELEHLFLGFRSCVGVERKKISNQKNLEILLQDGILFQKD 341


>gi|304437511|ref|ZP_07397468.1| HutW protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369488|gb|EFM23156.1| HutW protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 549

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 91/399 (22%), Positives = 161/399 (40%), Gaps = 18/399 (4%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-- 63
           A     T   ++   VY+H PFC KKC YC F  +  R +    +++   L E+      
Sbjct: 59  ADLMAQTPNPADERAVYIHIPFCDKKCSYCGFFQNFTREEAAH-HYVDVLLDELDAAADT 117

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                    ++FFGGGTP+ +   +IA ++  +     ++S+ EIT+E     +  +  +
Sbjct: 118 PYVQGAPFQAVFFGGGTPTALSDADIARLVQAVRARLPLTSDCEITLEGRIHDLTESKVE 177

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQ 182
               AG+NR SLGVQS + +  + +GR  +    IA +  +       +  DLIY LP Q
Sbjct: 178 AAMNAGINRFSLGVQSFDTRVRQAIGRIDDGETVIATLRRMVEQQGAVVIADLIYGLPYQ 237

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQS 241
           +M  WE +++      +    LYQL +   +   +    GDL +LP+     + +     
Sbjct: 238 SMEVWENDVRTQFEIGIAGGDLYQLNVFPSSELARRVASGDLPMLPTTEEQAEYFRRGID 297

Query: 242 I-TSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           I      +   + ++ +    E S++N    R  D +  G GA   +     R   +   
Sbjct: 298 IVMEYPMVRRIDTTHWATDHRERSIYNTLAKRGCDVLAFGSGAGGFIGQMMWRNHGA--- 354

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIEC 358
               + KMV +           +   +    +  G ++  G +    +    G +L  E 
Sbjct: 355 -LAPYEKMVEEGAKPFQFMGEQADAHRMQSEI--GDQIEHGYLYAPFFTKKYGVDLLTEM 411

Query: 359 ERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           E  L      G + R +    R T+ G    D++I    
Sbjct: 412 EPLLAAWAENGLVTRTETG-FRLTRAGEFWHDNLIQGFL 449


>gi|238928178|ref|ZP_04659938.1| possible coproporphyrinogen III oxidase [Selenomonas flueggei ATCC
           43531]
 gi|238884138|gb|EEQ47776.1| possible coproporphyrinogen III oxidase [Selenomonas flueggei ATCC
           43531]
          Length = 549

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 91/399 (22%), Positives = 161/399 (40%), Gaps = 18/399 (4%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-- 63
           A     T   ++   VY+H PFC KKC YC F  +  R +    +++   L E+      
Sbjct: 59  AELMAQTPNPADERAVYIHIPFCDKKCSYCGFFQNFTREEAAH-HYVDVLLDELDAAADT 117

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                    ++FFGGGTP+ +   +IA ++  +     ++S+ EIT+E     +  +  +
Sbjct: 118 PYVQGAPFQAVFFGGGTPTALSDADIARLVQAVRARLPLTSDCEITLEGRIHDLTESKVE 177

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQ 182
               AG+NR SLGVQS + +  + +GR  +    IA +  +       +  DLIY LP Q
Sbjct: 178 AAMNAGINRFSLGVQSFDTRVRQAIGRIDDGETVIATLRRMVERQGAVVIADLIYGLPYQ 237

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQS 241
           +M  WE +++      +    LYQL +   +   +    GDL +LP+     + +     
Sbjct: 238 SMEVWENDVRTQFEIGIAGGDLYQLNVFPSSELARRVASGDLPMLPTTEEQAEYFRRGID 297

Query: 242 I-TSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           I      +   + ++ +    E S++N    R  D +  G GA   +     R   +   
Sbjct: 298 IVMEYPMVRRIDTTHWATDHRERSIYNTLAKRGCDVLAFGSGAGGFIGQMMWRNHGA--- 354

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIEC 358
               + KMV +           +   +    +  G ++  G +    +    G +L  E 
Sbjct: 355 -LAPYEKMVEEGAKPFQFMGEQADAHRMQSEI--GDQIEHGYLYAPFFTKKYGVDLLTEM 411

Query: 359 ERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           E  L      G + R +    R T+ G    D++I    
Sbjct: 412 EPLLAAWAENGLVTRTETG-FRLTRAGEFWHDNLIQGFL 449


>gi|56698354|ref|YP_168727.1| coproporphyrinogen III oxidase [Ruegeria pomeroyi DSS-3]
 gi|56680091|gb|AAV96757.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria
           pomeroyi DSS-3]
          Length = 451

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 150/398 (37%), Gaps = 32/398 (8%)

Query: 7   YENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ- 64
           + + ++G    +++ +YVH PFC + C +C   +   +       ++ +   E+  + + 
Sbjct: 38  FGDWISGIAPGSAISLYVHVPFCRRLCWFCACRTQGTQTDNPVIAYVDTLKAELALLAER 97

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L     +S + +GGGTP+L+ P+ +  +   I     +    E ++E +P+ ++      
Sbjct: 98  LPEGVHLSRLHWGGGTPTLLNPELMRGLARSIFDTVPLGPEAEFSVEIDPNEIDPARLDA 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
             +AG+NR S+GVQ  +++  + +GR         A+ + R      ++ D++Y LP QT
Sbjct: 158 LAEAGMNRASIGVQDFDDEIQKTIGRIQGYDVTRDAVEMIRARGIYSLNADILYGLPHQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +    +Q+ LS   D ++LY        +  +        LP+    +DL++  + + 
Sbjct: 218 RARMTESVQKLLSLNPDRVALYGYAHVP-WMAKRQQLIPSDALPTPEQRLDLFDTARRLF 276

Query: 244 SAHGLHAYEISNHS-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSH 291
                    I + +                 N+  Y D      IG+G  + SR   G  
Sbjct: 277 MWDNYAEIGIDHFATQEDGLTRALKTGKLRRNFQGYTDDQAEVLIGVGASSISRFPQGYA 336

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---EM 348
           + A +   H       +R    +         +      L+  L     I   +      
Sbjct: 337 QNAPATSAHT----AAIRAGRFSTARGHLFKGQDVMRARLIEALMCDFRIDRAEILRDHE 392

Query: 349 LAGRNLDIECERNLQR-QGFIERVQFSRLRCTQRGMTM 385
           +    LD       +   G         LR T  G+ +
Sbjct: 393 ITAEELDQMFRNADEAFDGL--------LRVTADGLFI 422


>gi|226328809|ref|ZP_03804327.1| hypothetical protein PROPEN_02709 [Proteus penneri ATCC 35198]
 gi|225201995|gb|EEG84349.1| hypothetical protein PROPEN_02709 [Proteus penneri ATCC 35198]
          Length = 225

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 93/220 (42%), Positives = 137/220 (62%), Gaps = 5/220 (2%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  + ++Q  L ++       G R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHTLKGEVPHQEYVQHLLNDLDADLIHVGSREVQTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+  +++A +L G+ +   VS N EIT+EANP +VE   F G+++AGVNRIS+GV
Sbjct: 66  GGTPSLLSAESMADLLYGVKERLAVSPNAEITMEANPGTVEAERFAGFQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS     L  LGR H+A EA  A  LA+ +  R  + DL++ LP Q+++Q   +LQ+A+ 
Sbjct: 126 QSFGNDKLIRLGRIHDADEAKNAARLAKKLGLRSFNLDLMHGLPDQSLSQALSDLQQAIE 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
            +  HLS YQLTIE  T F          LP +++  D++
Sbjct: 186 LSPPHLSWYQLTIEPNTQFGSRPP----KLPDDDMLWDIF 221


>gi|115254130|emb|CAK03733.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 456

 Score =  230 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 153/399 (38%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           + +  + VY+H P+C   C YC  ++ + R       ++     E++ +    G   ++ 
Sbjct: 49  EEAGPVSVYLHVPYCRSMCWYCGCHTSITRQDGPVREYLDVMSQEIELVSFAAGNEVAVR 108

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++ FGGGTP+++ PQ  A I+  +   +   ++  I +E +P ++ V   +   ++GV+R
Sbjct: 109 NVHFGGGTPTIMRPQEFAAIISKLRSAFRFEADASIAVEIDPRTLAVPMIEALGESGVDR 168

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 169 ASLGVQSFDPIVQATINRMQSFEQTEIAVSGLRSMGISSINFDLIYGLPKQTVQSCLETV 228

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +            G    
Sbjct: 229 RLAAQLRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEAIAEELVKAGYARI 287

Query: 252 EISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +    +   +  N     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 288 GLDHFALPDDQLAVAARNGTMGRNFQGYTTDDCNTLIGLGTSAIGRLPTGYIQNHVP--- 344

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + V        +   L+ E +    ++  L     + +      +G +++   E
Sbjct: 345 -LGLYQERVASGILPTAKGYLLTEEDKLRAKIIERLMCDFEVDLGRLSKESGFDIEFLIE 403

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+  +Q    M+ +V A  
Sbjct: 404 RNERLNDLVADG-VATIFGDRIVVSQDARFMVRAVAAAF 441


>gi|303236362|ref|ZP_07322952.1| coproporphyrinogen dehydrogenase [Prevotella disiens FB035-09AN]
 gi|302483420|gb|EFL46425.1| coproporphyrinogen dehydrogenase [Prevotella disiens FB035-09AN]
          Length = 455

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 160/414 (38%), Gaps = 29/414 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +LSA E +   +    +  Y+H P+C   C YC  NS+        + ++ +   E+  +
Sbjct: 33  FLSAIERSNHDKHQPLVSFYLHIPYCRHLCHYCGCNSYAMMNSELVKQYVDALHREIDLV 92

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +L G R IS I +GGG+P+ I    I  + D +     +    EI IE +P  + + +
Sbjct: 93  AARLDGNRKISQIHYGGGSPTAIPINYIKELNDHLLSLMPIIDKPEIAIECHPGYLTIED 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           ++   + G  R SLG+Q  +E+ L+ + R  +       + L R     ++ DL+Y LP 
Sbjct: 153 WEQLVQCGFTRYSLGIQDFDERVLKAVNRRPSLLPVGEIVSLLRESGASINMDLLYGLPY 212

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +E   ++A +   D L  +        +  +      L LP+ +   ++Y    +
Sbjct: 213 QTPLSFEKTAEQAANLRPDRLVTFSYGHVP-WVHKRQQILEKLGLPAGDDKQEMYRRAAN 271

Query: 242 ITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY------GDYIGIGPGAHSRVKV 288
           +    G     + +      E          + N+  Y      G     G    S++  
Sbjct: 272 VLHQAGYQGIGMDHFVLPDDELNIALKNKQLHRNFQGYCTLRTTGQVYAFGVTGISQLGT 331

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +      +   +++  +  N   V     LS ++Q    ++  +      S  +   
Sbjct: 332 AYAQNG----RDIRTYIDTIHNNRLYVERGYALSRQEQIVREVIEAMMCNYHFSWSEIAA 387

Query: 349 LAGRNLDI---------ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               ++D          +  + ++  G +   + + L  T+ G   + +V+A L
Sbjct: 388 RLSVSVDEVKGAVNYNLDKLKEMEADGLLVLGEDA-LSMTEFGSPFVRNVVAAL 440


>gi|27350261|dbj|BAC47272.1| coproporphyrinogen III dehydrogenase [Bradyrhizobium japonicum USDA
           110]
          Length = 423

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 157/398 (39%), Gaps = 25/398 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISS 73
             + + +Y+H PFC   C YC F + + R +     ++ +   E++ + +       +S 
Sbjct: 22  PDDPVSLYIHVPFCRAICWYCGFPTSLTRSERPIRKYLATLHAEIRLVAEQAPRALPVSD 81

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP+ I P +   ++  + + +  S +  I IE +P +      +  + AGVNR 
Sbjct: 82  VHFGGGTPTTIAPADFLALMALLRRCFAFSKSATIAIEIDPRAFTAEMVETLQVAGVNRA 141

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +    R + R  +  +  + +  L ++   R++FDL++ LP QT+       +
Sbjct: 142 SIGVQSFDGVVQRSVNRVQSEVQTASVVESLRQHGISRINFDLLFGLPHQTVRSCVDSTR 201

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL+   D L+++       +   +  +  +  LP      +          + G     
Sbjct: 202 TALAMRPDRLAVFGYAHVP-SYMKRQRQIDETALPDNLARAEQAAAIADTLVSAGYRQIG 260

Query: 253 ISNHSFLGAE----------SLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +    E            ++L Y        IG+GP A  R++ G  +   +    
Sbjct: 261 LDHFALPNDELALAQKAGQLRRNSLGYSADTCKTVIGLGPSAIGRLREGYVQNESAT--- 317

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----D 355
             S+ + ++    A  +   LS E +    ++  L       V       G +       
Sbjct: 318 -ASYHQHIQAGRPATSKGYCLSPEDRLRAAIIERLMCDLQADVPAICAAHGFDPIPLLNS 376

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +    L   G I  ++   +R  Q    ++ +V A  
Sbjct: 377 ADRLGMLAEDG-IVDIEEGFIRVKQEHRFLVRAVAAAF 413


>gi|167647833|ref|YP_001685496.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
 gi|167350263|gb|ABZ72998.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter sp.
           K31]
          Length = 470

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 149/395 (37%), Gaps = 25/395 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
             ++ +Y+H PFC + C YC  N+          ++++  L E+  +   L    +  ++
Sbjct: 65  DQAVSLYLHIPFCARLCWYCGCNTRAVNRHEPVGDYVRLLLDEIDLLGAALPARLTAGTV 124

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGGTP+++    +  I D + K + ++S+++I IE +P+ +  +  +     G++R S
Sbjct: 125 HFGGGTPNMLSTDEVDAIFDRLGKVFDLASDIDIAIEMDPAVLTRDWVRAAGARGLSRAS 184

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ+L  +    + R     +    +   R      ++ DL+Y LP QT       L  
Sbjct: 185 LGVQNLTPEVQAAVNRRDTFDQIADCVAWLREAKVASINLDLMYGLPHQTTANTLSTLDE 244

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L+   + L+L+        +        +  LP     +D         +A G     +
Sbjct: 245 LLTLRPERLALFGYAHVP-WMKSHQQLIDEAALPGPQARLDQSESAAERLAAEGYVRIGL 303

Query: 254 SNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +          A      N+  Y        +G+G  A   +  G  + A     H 
Sbjct: 304 DHFALPEDPMAKALAAGTLRRNFQGYTTDPAVTLLGMGASAIGGLPQGFVQNAA----HE 359

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DI 356
            +W   V++    V     +S E +    ++  L     + +        R+      ++
Sbjct: 360 LTWRAAVKEGRLPVARGVAISDEDRFRAEIIERLMCDFAVDLAAVCARHRRSPADLAGEL 419

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                    G + RV    ++    G  ++ S+ A
Sbjct: 420 ARLAPFVADGLV-RVDGFNIQVPPVGRLLVRSIAA 453


>gi|161501789|ref|YP_765320.2| coproporphyrinogen III oxidase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 450

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 153/399 (38%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SIS 72
           + +  + VY+H P+C   C YC  ++ + R       ++     E++ +    G   ++ 
Sbjct: 43  EEAGPVSVYLHVPYCRSMCWYCGCHTSITRQDGPVREYLDVMSQEIELVSFAAGNEVAVR 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++ FGGGTP+++ PQ  A I+  +   +   ++  I +E +P ++ V   +   ++GV+R
Sbjct: 103 NVHFGGGTPTIMRPQEFAAIISKLRSAFRFEADASIAVEIDPRTLAVPMIEALGESGVDR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 163 ASLGVQSFDPIVQATINRMQSFEQTEIAVSGLRSMGISSINFDLIYGLPKQTVQSCLETV 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +            G    
Sbjct: 223 RLAAQLRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEAIAEELVKAGYARI 281

Query: 252 EISNHSFLGAE---SLHN----LNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +    +   +  N     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 282 GLDHFALPDDQLAVAARNGTMGRNFQGYTTDDCNTLIGLGTSAIGRLPTGYIQNHVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + V        +   L+ E +    ++  L     + +      +G +++   E
Sbjct: 339 -LGLYQERVASGILPTAKGYLLTEEDKLRAKIIERLMCDFEVDLGRLSKESGFDIEFLIE 397

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+  +Q    M+ +V A  
Sbjct: 398 RNERLNDLVADG-VATIFGDRIVVSQDARFMVRAVAAAF 435


>gi|289522844|ref|ZP_06439698.1| coproporphyrinogen dehydrogenase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503868|gb|EFD25032.1| coproporphyrinogen dehydrogenase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 346

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 12/349 (3%)

Query: 48  QENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
            + F+     E++    L G +    +++ GGGTP+L+       ++  + +       +
Sbjct: 8   IDKFMNCLDEELKLWAALAGGKIKAQTLYIGGGTPTLLNHWQWERLISSLERYVDFLPFL 67

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           E ++EANP S+  ++ + +R   + R+SLGVQSL++  L+ L R H+A +A  AI     
Sbjct: 68  EASVEANPGSLTADHIKLWRSWRITRVSLGVQSLDDGELQLLKRPHSAHDAADAIAALVA 127

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
               +S DLI+ LP QT+  W   L+  L++ + HLS+Y+LT+E+GT        G+   
Sbjct: 128 SGLEVSVDLIFGLPGQTIQSWHRTLKDCLNFGIRHLSIYELTLEEGT------SWGECPP 181

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
                   LY   Q      G   YEI++ S       HN+ YW+  +++G+GP A   +
Sbjct: 182 SGLTEGYPLYRFAQWYLPKKGFIQYEIASFSLPRHWCRHNIAYWQGENFLGVGPSAWGYL 241

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
               +       +  + +   +      V  +E L  ++QA E  ++ LR R G++   +
Sbjct: 242 NGFRYGNT----REIKDYFDQITSEKLPVAYQEILPQDKQATEAAILALRTRWGVTATTF 297

Query: 347 EMLAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTMLDSVIANLA 394
           +   G     +     ++     R     R   T +G  + +++  N  
Sbjct: 298 KRKYGWKAYRKFLDTWEKLPSDCRAACRGRHAFTPKGFRIANALWENFL 346


>gi|153952155|ref|YP_001397927.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939601|gb|ABS44342.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 451

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 155/397 (39%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSAILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQATVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSLNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         +      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKSGADLVGVGLTSIG----EGQKHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDISSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           +++L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KKDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|238796096|ref|ZP_04639607.1| Coproporphyrinogen III oxidase [Yersinia mollaretii ATCC 43969]
 gi|238720041|gb|EEQ11846.1| Coproporphyrinogen III oxidase [Yersinia mollaretii ATCC 43969]
          Length = 437

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 83/388 (21%), Positives = 157/388 (40%), Gaps = 35/388 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--MQWMRQLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  + +     +    L E  M+    L     I +I+FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNPLQPES-TARYTDYLLRELSMEAHSPLLQGGPIHAIYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q +  I+  + +   ++ + EIT+E    + +        +AG NR S+G+Q
Sbjct: 115 GTPSALSAQQLHRIIGELRQTLPLAPDCEITVEGRIFNFDDERIDACLEAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +  + +GR  +  +AI  +  LA      +  DL++ LP QT   W+ +L      
Sbjct: 175 TFNTRIRQRMGRKADRDQAIRFLTDLAARDRAAVVCDLMFGLPHQTPETWQEDLAIVRQL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP+     D Y       +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKSVENNRIALPTLAQQCDFYCSGADSLAQAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   ++  ++    S     +++ +++      + 
Sbjct: 295 RTTRERNLYNLLIKQGADCLALGSGAGGSLQGHAYMQHRS----LDNYYQLIDSGQKPL- 349

Query: 317 EKEFLSSEQQADEFLMMG--------LRLREGISVKDW---EMLAGRNLDIECERNLQRQ 365
                         +M           +L+ GI V      E++A     +       + 
Sbjct: 350 -------------MMMTQASGEHPWWAKLQSGIEVGRLDLSELIANPYPLMPLVAQWHQH 396

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANL 393
             ++   F  LR T  G     +++  L
Sbjct: 397 NLLKDNTF-CLRLTDSGRFWASNMMQAL 423


>gi|161511107|ref|NP_768647.2| coproporphyrinogen III oxidase [Bradyrhizobium japonicum USDA 110]
 gi|8778188|gb|AAF79211.1|AF276709_1 coproporphyrinogen III dehydrogenase [Bradyrhizobium japonicum]
 gi|12620703|gb|AAG60979.1|AF322013_98 HemN1 [Bradyrhizobium japonicum]
          Length = 445

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 78/398 (19%), Positives = 157/398 (39%), Gaps = 25/398 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISS 73
             + + +Y+H PFC   C YC F + + R +     ++ +   E++ + +       +S 
Sbjct: 44  PDDPVSLYIHVPFCRAICWYCGFPTSLTRSERPIRKYLATLHAEIRLVAEQAPRALPVSD 103

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP+ I P +   ++  + + +  S +  I IE +P +      +  + AGVNR 
Sbjct: 104 VHFGGGTPTTIAPADFLALMALLRRCFAFSKSATIAIEIDPRAFTAEMVETLQVAGVNRA 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQS +    R + R  +  +  + +  L ++   R++FDL++ LP QT+       +
Sbjct: 164 SIGVQSFDGVVQRSVNRVQSEVQTASVVESLRQHGISRINFDLLFGLPHQTVRSCVDSTR 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            AL+   D L+++       +   +  +  +  LP      +          + G     
Sbjct: 224 TALAMRPDRLAVFGYAHVP-SYMKRQRQIDETALPDNLARAEQAAAIADTLVSAGYRQIG 282

Query: 253 ISNHSFLGAE----------SLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +    E            ++L Y        IG+GP A  R++ G  +   +    
Sbjct: 283 LDHFALPNDELALAQKAGQLRRNSLGYSADTCKTVIGLGPSAIGRLREGYVQNESAT--- 339

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----D 355
             S+ + ++    A  +   LS E +    ++  L       V       G +       
Sbjct: 340 -ASYHQHIQAGRPATSKGYCLSPEDRLRAAIIERLMCDLQADVPAICAAHGFDPIPLLNS 398

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +    L   G I  ++   +R  Q    ++ +V A  
Sbjct: 399 ADRLGMLAEDG-IVDIEEGFIRVKQEHRFLVRAVAAAF 435


>gi|315498466|ref|YP_004087270.1| oxygen-independent coproporphyrinogen iii oxidase [Asticcacaulis
           excentricus CB 48]
 gi|315416478|gb|ADU13119.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           excentricus CB 48]
          Length = 466

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 146/383 (38%), Gaps = 25/383 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           +    + +Y+H PFC + C +C  N+         E ++ + + E+Q +    G R  + 
Sbjct: 57  RPDQPIALYLHIPFCEQMCHFCGCNTRATLKYAPVEAYVGALVAEIQAVGAHLGFRPAVH 116

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S+ FGGG+PS+++P ++  + + + + + +  + EI IE +P  V ++  + Y   G NR
Sbjct: 117 SVHFGGGSPSMLKPADMGRLFEALHEAFDLLPDAEIAIELDPRRVTLSKIKAYAAFGFNR 176

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+Q         + R     +    + HL  N   R+  DL+Y LP QT+   +  L
Sbjct: 177 VSLGIQDTYPAVQAAINRIQPLEQVKTVMGHLRDNGLNRIGIDLVYGLPGQTLKSLDTTL 236

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   D +S +        +        +  LP     V ++       ++HG  A 
Sbjct: 237 AHVSELDPDRISAFSYAHVP-WVKRHQTLIDEARLPGTEDKVAMFLRLSDYLTSHGYRAI 295

Query: 252 EISNHSFLGAE-SLH------NLNYWRY----GDY-IGIGPGAHSRVKVGSHRVAISIEK 299
            I + +    E S          N+  Y     DY +G+G  +   +  G  +       
Sbjct: 296 GIDHFAKPDDEMSRAFEARTLRRNFMGYSTLPNDYLLGLGASSIGELDGGIMQNIPQST- 354

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-----RNL 354
              ++   +     A V       +    + ++  L       +       G      + 
Sbjct: 355 ---TYQNRLVAGDWATVRGWAYQGDDTLRKAVISDLMCYFEADIPAILERYGYAADYLDA 411

Query: 355 DIECERNLQRQGFIERVQFSRLR 377
           DI    +    G +  V+  R+R
Sbjct: 412 DIAGLADFMAAGLVS-VENRRVR 433


>gi|89255387|ref|NP_659743.2| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|89213341|gb|AAM54757.2| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 450

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 144/399 (36%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 43  AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R
Sbjct: 103 YVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPVIDALAENGVDR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 163 ASLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSINFDLIYGLPKQTVQSCIETV 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +   +        G    
Sbjct: 223 RLAAELRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRI 281

Query: 252 EISNHSFLG------AESL-HNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +         A +     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 282 GLDHFALPNDQLALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +        +   LS E +    ++  L       +      +G +     E
Sbjct: 339 -LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVE 397

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+   +    M+ +V A  
Sbjct: 398 RNDRLGELMADG-VVTISGERIVVCEEARFMVRAVAAAF 435


>gi|57237817|ref|YP_179065.1| coproporphyrinogen III oxidase [Campylobacter jejuni RM1221]
 gi|57166621|gb|AAW35400.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni RM1221]
          Length = 451

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 154/397 (38%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S +VEI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDVEISCEIDPRFLNEEQATVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L        ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +GIG  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGIGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|293373130|ref|ZP_06619494.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
 gi|292631901|gb|EFF50515.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides ovatus SD CMC 3f]
          Length = 454

 Score =  229 bits (585), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 82/415 (19%), Positives = 157/415 (37%), Gaps = 30/415 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A   + + +  N +  Y+H PFC   C YC  NS+        E ++ +   E+  
Sbjct: 32  DYLCAVNASDSAR-QNQISFYLHIPFCRHLCHYCGCNSYPAAKPETVEAYVGALHREIDL 90

Query: 62  M-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + R +   R IS I +GGG+P+ I    +  + D +       ++ EI IE +P  +  +
Sbjct: 91  VARHIDNSRQISQIHYGGGSPTSIPIPMLKELNDHLLSIAPTIASPEIAIECHPGYLSEH 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++Q     G  R S+G+Q ++E+ L+ + R  +       + + R     ++FD IY LP
Sbjct: 151 DWQQLTACGFTRYSIGIQDMKEEVLKAVNRRPSLLPLQEILQILRASGATVNFDFIYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++  +   +++A +   D L  +        LF +      + LP+      +Y    
Sbjct: 211 LQSVDSFRKTIEQASALRPDRLVTFSYAHLPK-LFPRQQILDRMGLPATEEKNRMYETAS 269

Query: 241 SITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY------GDYIGIGPGAHSRVK 287
            I    G  +  + +      E          + N+  Y            G  A S++ 
Sbjct: 270 EILRQAGYQSIGLDHFVLPDDELYTALQTGRLHRNFQGYCTRRTTAQVYAFGVTAISQLD 329

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      +  +++++ + K+         LS+EQ+    ++  L     +   D  
Sbjct: 330 DAYAQNG----REIKAYIETIGKDRLYTSRGYQLSAEQKLIREVVETLMCNYTLDWNDVA 385

Query: 348 MLAGRNL---------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G ++         D E  R +   G I       +     G   +  V A L
Sbjct: 386 ERTGTSVAQLRKTCHYDEERLREMASDG-ILVFDDHHITVNTDGRPFVRCVAAAL 439


>gi|255280798|ref|ZP_05345353.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bryantella
           formatexigens DSM 14469]
 gi|255268735|gb|EET61940.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bryantella
           formatexigens DSM 14469]
          Length = 482

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 146/312 (46%), Gaps = 20/312 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F S     +K   ++++ +   E++    +   +++ ++
Sbjct: 164 QNGYSLYVGIPFCPSICLYCSFGSSPLSVWKNRVDDYLDALCREIEQTAHIWQGKTLDTV 223

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P+ +  +L+ + + +  S   E T+EA  P S+     Q  +K  V RI
Sbjct: 224 YIGGGTPTTLSPEQMQRLLEKLEECFDFSHLKEFTVEAGRPDSITAEKLQVLKKHPVTRI 283

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ + +L  +GR H A++   A  +AR   F  ++ DLI  LP +   + E  +Q
Sbjct: 284 SINPQTMNDGTLEVIGRGHTAAQTKEAFAMARQLGFDNINMDLIVGLPGEGYPEVEYTMQ 343

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
           +  + A D ++++ L +++ T   +++   D   P   V + ++ ++T    +  G   Y
Sbjct: 344 QVTALAPDSITVHSLALKRAT---RLNLFKDKYAPVSFVNSGEIMDMTARYAAQAGQFPY 400

Query: 252 ------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIE 298
                       E   ++  GA  ++N+         + +G GA +++  G     I   
Sbjct: 401 YLYRQKNMAGNFENVGYAREGAAGIYNILIMEEKQSILALGAGASTKIVSGGRIERIENV 460

Query: 299 KHPESWLKMVRK 310
           K   S+++ + +
Sbjct: 461 KDIRSYIERIDE 472


>gi|288929078|ref|ZP_06422924.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288330062|gb|EFC68647.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 455

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 155/415 (37%), Gaps = 30/415 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL+A + +      +++  Y+H PFC   C YC  NS         E +  +   E+  
Sbjct: 33  EYLAAVDQS-NNAAVDNISFYIHVPFCQHLCHYCGCNSVAMARNEVVEAYFDALHREINL 91

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+P+ I   +I  + + +  ++    N EI IE +P+ +   
Sbjct: 92  LLPHLDKGRKISQIHYGGGSPTSIPLHHIKRLNEHLLGSFGTIENPEIAIECHPAYLNDE 151

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +++     G  R SLG+Q  +E  LR + R  +       +   R    +++ D IY LP
Sbjct: 152 HWEQLIGCGFTRYSLGIQDFDENVLRTVNRRPSLLPVEHIVERLRQSGAKVNLDFIYGLP 211

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+  +   + RA+    + L  +        ++ +      + LP E   + ++    
Sbjct: 212 GQTVQSFARTIARAIDMRPNRLVTFSYAHVP-YIYGRQRILEKVGLPPETEKMRMFEQAA 270

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY------GDYIGIGPGAHSRVK 287
              +  G     + +                 + N+  Y           +G    S++ 
Sbjct: 271 EQLARAGYCHIGMDHFVEPNDDLQQALERKQLHRNFQGYCPRRITAQVYALGVSGISQLD 330

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR---------LR 338
               +      K    +++   +    +     L   Q+    ++  L          + 
Sbjct: 331 AAYAQNT----KDVARYIQYTNEGRLCIERGYALQPWQRVAREVIESLMCNYYVAWTDMA 386

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + +++   E+    N D+     +   G I  ++ + +  T+ G   + +V A L
Sbjct: 387 QRLNISAEEVKEALNYDVPALLQMADDGLIT-LEPTHIALTEAGSPFVRNVAAAL 440


>gi|218671366|ref|ZP_03521036.1| coproporphyrinogen III oxidase [Rhizobium etli GR56]
          Length = 416

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 144/399 (36%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 9   AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 68

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R
Sbjct: 69  YVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDR 128

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 129 ASLGVQSYDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSINFDLIYGLPKQTVQSCIETV 188

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +   +        G    
Sbjct: 189 RLAAELRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRI 247

Query: 252 EISNHSFLG------AESL-HNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +         A +     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 248 GLDHFALPNDQLALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP--- 304

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +        +   LS E +    ++  L       +      +G +     E
Sbjct: 305 -LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVE 363

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+   +    M+ +V A  
Sbjct: 364 RNDRLGELMADG-VVTISGERIVVCEEARFMVRAVAAAF 401


>gi|260463697|ref|ZP_05811895.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|319785183|ref|YP_004144659.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|259030551|gb|EEW31829.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           opportunistum WSM2075]
 gi|317171071|gb|ADV14609.1| oxygen-independent coproporphyrinogen III oxidase [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 448

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 156/410 (38%), Gaps = 32/410 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L A   +      + + +YVH PFC + C +C  ++   R+      ++ S   E+  +
Sbjct: 37  WLEALSED------DEISLYVHIPFCDRLCWFCACHTKQTRHYEPVTRYLGSLHAEIATV 90

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L G +  + ++  GGG+P+++ P ++  +   +  +++      I++E  P+ ++   
Sbjct: 91  SGLAGGKGRVRAVHLGGGSPTMLRPDDMVALGTALRHSFSFLPGTRISVEIEPNDMDEAR 150

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
                + G+ R SLGVQ L+++  R + R     +    +   R+     ++ DL+Y LP
Sbjct: 151 LDALAEIGMTRASLGVQDLDQKVQRAINREQTFLQTKTVVDGVRSRGVESVNLDLLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT       +++AL+   D ++L+         F K     D   LP     +    L 
Sbjct: 211 HQTREIVLSTVRQALTLEPDRIALFGYAHVP--WFKKHQTMIDQAWLPGPEERLAQSQLA 268

Query: 240 QSITSAHGLHAYEISNHSFLGAESLH-------NLNYWRYGD-----YIGIGPGAHSRVK 287
                  G     + + +                 N+  Y +      IG+GP + S+ +
Sbjct: 269 ARAILDQGYEPIGLDHFAKPDDALALAARAGTLRRNFQGYTEDRCETLIGLGPSSISQFR 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +   S       + +MV   G A V     S++ +A  +++  L    G S  D  
Sbjct: 329 QGYVQNMPST----AEYGRMVDDGGLASVRGIAFSNDDRARGWVIERLMCDFGFSAVDLV 384

Query: 348 MLAGRNLDIECER----NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G+       R     L +   +E +   R          +  V A  
Sbjct: 385 ERFGKAGQKLLLRSSTVALDKSVRLE-LDGDRFVVPLESRPFVRCVAAKF 433


>gi|190894294|ref|YP_001984588.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
 gi|218510459|ref|ZP_03508337.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
 gi|190699955|gb|ACE94038.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
          Length = 450

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 144/399 (36%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 43  AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R
Sbjct: 103 YVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 163 ASLGVQSYDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSINFDLIYGLPKQTVQSCIETV 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +   +        G    
Sbjct: 223 RLAAELRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRI 281

Query: 252 EISNHSFLG------AESL-HNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +         A +     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 282 GLDHFALPNDQLALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +        +   LS E +    ++  L       +      +G +     E
Sbjct: 339 -LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVE 397

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+   +    M+ +V A  
Sbjct: 398 RNDRLGELMADG-VVTISGERIVVCEEARFMVRAVAAAF 435


>gi|254420307|ref|ZP_05034031.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
 gi|196186484|gb|EDX81460.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
          Length = 451

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 150/410 (36%), Gaps = 26/410 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L   E  +      SL VYVH PFC + C YC  ++ +         F    L E+    
Sbjct: 34  LEEVETWLIADEGESLSVYVHIPFCDRLCWYCGCHTSIVSDYERVAAFQAQLLREIALWA 93

Query: 64  QLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +  G R   +  + FGGG+P+++ P +   ++D +   +  + + E+ +E +P+ +E+  
Sbjct: 94  ERPGVRRGVVRHLHFGGGSPNILRPADFVAVVDRLRSIFRFAPDAEVAVELDPARLEIGF 153

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
             G  +AGV R+SLGVQ+ +      + R    ++   A+   R      ++FDL+Y LP
Sbjct: 154 IAGLAQAGVTRVSLGVQTFDPAVQVRVNRPQPYAQVAEAVEELRRAGIAGVNFDLMYGLP 213

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT          A   A D L+++        L        +  L              
Sbjct: 214 GQTPDNVAETADLAAGLAPDRLAVFGYAHVP-WLKKHQSMIAETELADAAGRWAQAGAAH 272

Query: 241 SITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
               + G  A  + +++          A+     N+  Y D      + +GP A  +   
Sbjct: 273 DRLVSAGYEAIGLDHYARPDDRLSRALAQGGLRRNFQGYTDDPARVLVPLGPSAIGQWPT 332

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G  + A         W + +      V     L+SE +    ++  L       V     
Sbjct: 333 GLVQNAADA----RVWRQAISDGRLPVARILPLTSEDRLRGAVIEALMTGLSADVDQISQ 388

Query: 349 LAGRNLD-----IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G++ D     ++  R     G   R+   R+        ++ +V A  
Sbjct: 389 NHGQSSDHLDACLDRLREAADAGLC-RIDGRRVWIPDAARRLVRTVAAAF 437


>gi|261885446|ref|ZP_06009485.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 379

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 25/343 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y+   +N   G  +  L +Y H PFC   C +C  N            ++     E++ 
Sbjct: 34  EYIKRLKN---GDKNRKLSLYFHLPFCRSACYFCGCNVIYTSKSDKMSRYLDYLSKELEI 90

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEV 119
           + + L   R ++ + FGGGTP+      +  ++  I K++   S + EI+ E +P  +  
Sbjct: 91  LSEVLDTKRQVTQMHFGGGTPTFYSADELDRLIKEIKKHFKNWSDDAEISCEIDPRFLNE 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
           +        G NR+S GVQ  +E+    + R         A+ +AR      ++ DLIY 
Sbjct: 151 DQLDVLVGHGFNRVSFGVQDFDEKVQTEIHRIQPFEMTKNAVDMARSKGITSINTDLIYG 210

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP Q++  ++  L+  +S   D  +++        +   M K  +  LP+  + +++   
Sbjct: 211 LPYQSLESFKKTLELGVSLNPDRFAVFNYAHVP-WIKKSMRKFDEATLPNPKIKLEILKY 269

Query: 239 TQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSR 285
           T    +++G     + +++    E        SLH  N+  Y      D IGIG  +   
Sbjct: 270 TMEFLTSNGYKMIGMDHYAKEDDELSKALENGSLHR-NFQGYTTKGGADLIGIGLTSIGE 328

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD 328
                        K   S+ K +  N     +   L++E +  
Sbjct: 329 GDD----YYAQNYKDMVSYEKAIDDNKLPNSKGVLLNNEDKLR 367


>gi|124002479|ref|ZP_01687332.1| oxygen-independent coproporphyrinogen III oxidase [Microscilla
           marina ATCC 23134]
 gi|123992308|gb|EAY31676.1| oxygen-independent coproporphyrinogen III oxidase [Microscilla
           marina ATCC 23134]
          Length = 454

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/394 (17%), Positives = 141/394 (35%), Gaps = 20/394 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISS 73
               + +Y+H PFC   C +C  N  + +    +  ++++ L E Q  + L   P  I  
Sbjct: 48  PQEGISLYIHLPFCESLCTFCGCNKRITKNHQVERPYLETVLKEWQMYKDLFDTPPRIKE 107

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGG+P+    QN+  +++GI  +  +      + E NP++    + Q     G  R+
Sbjct: 108 MHLGGGSPTFFSAQNLGWLIEGILADTELDDTPLFSFEGNPNNTTKEHLQVLYNLGFRRV 167

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S G+Q  +    + + R     +       ++ +    ++ DL+Y LP QT+      ++
Sbjct: 168 SYGIQDYDLNVQKAIRRIQPYEQVQLTHEQSKAVGYTSINHDLVYGLPLQTLESVLDTIR 227

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  + A D ++ Y                 +  LP       LY   + +  + G     
Sbjct: 228 KTEALAPDRIAFYSYAHVPWVKGSGQRGYSETDLPKSAAKRQLYEEGRQLLESGGYREIG 287

Query: 253 ISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + S           E   + N+  Y        IG+G  + S     S        K 
Sbjct: 288 LDHFSLSNDDLYQALEEKRLHRNFMGYTSSKTQLMIGLGVSSIS----DSWYAFAQNVKK 343

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV-KDWEMLAGRNLDIECE 359
            E +  +V      V     L++E       ++ L  +   S   +   L G +  +   
Sbjct: 344 VEEYQHLVNSGELPVFRGHHLNTEDLIIRQHILNLMCQLETSWTNEEAKLGGFDGLMPHL 403

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              ++ G I  V    ++    G   + ++    
Sbjct: 404 EEFEKDGLIS-VSNEGIKIKAEGRPFIRNICMAF 436


>gi|221134831|ref|ZP_03561134.1| coproporphyrinogen III oxidase [Glaciecola sp. HTCC2999]
          Length = 456

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 140/360 (38%), Gaps = 19/360 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           S  + +Y+H PFC   C YC  N  V R     + ++     E+  + Q     +IS I 
Sbjct: 53  STPISLYIHIPFCHSLCYYCGCNKRVTRDNSKADEYLHYLGLEIAQIAQHNPEITISHIH 112

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGG+PS +  +    ++  +  ++ ++S  +++IE +P ++     Q   K G  R+SL
Sbjct: 113 YGGGSPSFLSIEQHTKLMHLLTSHFNLASECQMSIECDPRNLTPPYIQHLAKLGFTRMSL 172

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ ++      + R  ++S   A I  A +  F  ++ D+I  LP+Q +T  +  L   
Sbjct: 173 GVQDVDPIVQTTINRVQSSSHIQACIADAYHAGFSSINLDIIVGLPEQNLTTIQHTLSAL 232

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             + VD +S++         F    K     +P+  +   + +       + G  A  + 
Sbjct: 233 AQFNVDRISVFNYAHLPE-RFAAQRKFSKHNMPAPELKQQMTSHIAQTLQSMGYQAIGMD 291

Query: 255 NHSFL----------GAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +            G  S +   Y   +    +G+G  A S +     + A+      +
Sbjct: 292 HFAKPNDSLAVAANKGVLSRNFQGYTCDQNDQILGLGVSAISNISHIRAQNAV----DLK 347

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
            + + V        +   L+ +      L+  L     I++         + D      +
Sbjct: 348 RYYQQV-TTESLRHKGRQLTQDDLIRGDLINQLMCNYTINLAAISQRWSIDADKYFAHEI 406


>gi|4378844|gb|AAD19712.1| oxygen-independent coproporphyrinogen III oxidase [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 452

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 78/405 (19%), Positives = 156/405 (38%), Gaps = 31/405 (7%)

Query: 5   SAYENNMTGQ----------GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           + + N++T +            + + +Y+H PFC + C YC  ++ V R +     ++ +
Sbjct: 32  ADFRNDLTPKEHAIRIKNVAPDSRISIYLHVPFCQQLCHYCGCHTKVVRRQEIITAYVDT 91

Query: 55  FLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            + E++ +  L      I  + +GGGTPS+I  + I  ++  + + +  + ++   +E +
Sbjct: 92  LVKEIETVGNLAPNHLKIGHLSWGGGTPSIIGIEGIRRVMKALQRYFDAAEDMIHAMELD 151

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MS 172
           P  ++    Q     G+NR SLGVQ       + +GR     +   AI   R      ++
Sbjct: 152 PRLLDAEFAQNLFDIGINRTSLGVQDFNPHIQKAIGRVQPIEQVEKAILALRQAGISQVN 211

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL+Y LP Q + +  +  Q   +  +  L +  + I       +M    +  LP     
Sbjct: 212 FDLLYGLPHQGLDEIRLNCQETCACRLTELPVLAMPICPNGKPIRMID--ESALPQTKER 269

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSF-------LGAESLHNLNYWRYGD-----YIGIGP 280
            +   L   I   +G  A  I + +           E     N+  Y        IG+G 
Sbjct: 270 FEQAALIAEILQQNGYQAIGIDHFAKTDDLLAVAAREKKLRRNFQGYTTDNEPVLIGLGA 329

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A S          I      +++ + + + G A      +S E      ++  L     
Sbjct: 330 SAISTFSDA----YIQNIADIKNYSRAIEEQGLASFRGIDISQEDHLRGEIISALMCHFA 385

Query: 341 ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           + +  ++       +     +L+ +G I + Q +R+  T  G   
Sbjct: 386 VDLTPYDKSLSLEDEKRELSHLEEEGLI-QFQQNRIEMTDAGRPF 429


>gi|219112533|ref|XP_002178018.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410903|gb|EEC50832.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 516

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 184/443 (41%), Gaps = 67/443 (15%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDF----------------------NSHVRRYKVGQENFI 52
               +G+Y+H P+C ++C YC+F                      N+ +  +      + 
Sbjct: 67  APEPVGLYIHIPYCQRRCRYCNFAIVPIGSAAAARAQSDEGERPINAQLSGFLEMDHMYT 126

Query: 53  QSFLTEMQWMR---QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN---WTVSSNV 106
           Q+ L E+QW           S++SI+FGGGTPSL     I  IL  I      +T+    
Sbjct: 127 QTILKELQWTLSKMPQDQKVSLTSIYFGGGTPSLAPVATIRTILHAILAEDTPFTLKGGA 186

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           EIT+E +P +   +  Q  ++ GVNRISLGVQ+L++  L  LGR H   +   ++ + + 
Sbjct: 187 EITMEMDPCTFSKDQLQELKELGVNRISLGVQALDDGILESLGRIHRVQDIYKSLSMMQE 246

Query: 167 IF---PRMSFDLIYALPKQTMTQWEMELQRALSYAVD--HLSLYQLTIEKGTLFYKMHKD 221
           ++      S DLI  LP  ++  W   LQ+ ++      HLSLY L +E GT+F K + +
Sbjct: 247 VYGDELSYSLDLISGLPGLSLAAWTETLQKVVTLEPKPCHLSLYDLQVESGTVFAKWYGN 306

Query: 222 GD----------------LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA---- 261
           GD                + LPS+  +  +Y        + G   YE+S+++        
Sbjct: 307 GDEESGWDRVRGNLPTPAVALPSDAESAFMYQYAAGYLRSRGYEHYEVSSYALRDETQTG 366

Query: 262 ----ESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                S HN  YW     +  +G GA S V         ++  +   W+  VR       
Sbjct: 367 PSPWRSRHNQIYWATNSQWYALGLGATSFVANELVARPRTLVDY-ADWVNRVRT--LPDA 423

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA---GRNLDIECER--NLQRQGFIERV 371
               +   +     ++  LR  EG+ +          G       +R   L  +  + ++
Sbjct: 424 GVSEIVDTELLLNVVLKRLRTSEGLDLGFVHQRFSPKGDAFVDAIQRGAALALELGLAQL 483

Query: 372 QFSRLRC-TQRGMTMLDSVIANL 393
             + LR    +G    +++IA++
Sbjct: 484 NDNVLRLVDPKGFLYSNTIIASI 506


>gi|327191649|gb|EGE58657.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CNPAF512]
          Length = 450

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 144/399 (36%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 43  AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R
Sbjct: 103 YVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 163 ASLGVQSYDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSINFDLIYGLPKQTVQSCIETV 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +   +        G    
Sbjct: 223 RLAAELRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRI 281

Query: 252 EISNHSFLG------AESL-HNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +         A +     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 282 GLDHFALPNDQLALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +        +   LS E +    ++  L       +      +G +     E
Sbjct: 339 -LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVE 397

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+   +    M+ +V A  
Sbjct: 398 RNDRLGELMADG-VVTISGERIVVCEEARFMVRAVAAAF 435


>gi|284926222|gb|ADC28574.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 451

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 155/397 (39%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R  +      A++L        ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    ++  S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCENFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|288801617|ref|ZP_06407059.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           melaninogenica D18]
 gi|288335659|gb|EFC74092.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           melaninogenica D18]
          Length = 454

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 80/401 (19%), Positives = 158/401 (39%), Gaps = 29/401 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
             +L  Y H PFC + C YC  NS+    +   E ++Q+   E+  +   L   R IS I
Sbjct: 45  EKNLSFYFHMPFCRRLCHYCGCNSYPMAKQEHVEAYVQALHKEIDLVAKHLDNSRRISQI 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGG+P+ +    +  + + +   ++     EI IE +P  +   ++QG   A  NR S
Sbjct: 105 HYGGGSPTAMPVSVLKELNEHLLSLFSTIEQPEIAIECHPGYLTAEDWQGLLDARFNRFS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ   E+ LR + R  +       + + RN    ++ D ++ LP QT   ++  ++RA
Sbjct: 165 LGVQDFNEEVLRLVNRTPSELPTEEIVAILRNAGVNINMDFLFGLPLQTSDSFKKTIERA 224

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++   D ++ +        +F +        LP       ++   + +    G  +  + 
Sbjct: 225 VAMRPDRVTTFSYG-HCPWIFKRQMILEKAGLPDTEEKALMFQKAKDVLHEAGYLSVGLD 283

Query: 255 NHSFLGAE-------SLHNLNYWRY------GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           +      E          + N+  Y      G     G    S+++    +   SI    
Sbjct: 284 HFVLPNDELSEALQSHRLHRNFQGYCTRRTTGQVYAFGVTGISQLETAYAQNTKSI---- 339

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---------EMLAGR 352
           + ++  V      + +   L+S+++    ++  L     +              E+    
Sbjct: 340 DEYITEVSAGTLPIRKGYQLTSKERIVREVIERLMCNYHLDWTHLAEDLVVSVAEVKEAI 399

Query: 353 NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           N D+E  + ++R G +   + + L  T  G   + +V A L
Sbjct: 400 NYDVERLQEMERDGILCLTENT-LEMTGEGNPFVRTVAAAL 439


>gi|319953467|ref|YP_004164734.1| oxygen-independent coproporphyrinogen iii oxidase [Cellulophaga
           algicola DSM 14237]
 gi|319422127|gb|ADV49236.1| oxygen-independent coproporphyrinogen III oxidase [Cellulophaga
           algicola DSM 14237]
          Length = 453

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 77/407 (18%), Positives = 154/407 (37%), Gaps = 27/407 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + ++E + + +G   + +Y+H PFC   C +C  +  + +    +  ++Q+ L E Q   
Sbjct: 39  IQSFEESNSSEG---ISLYIHLPFCESMCTFCGCHKRITKRHEVEVPYLQTVLKEWQLYC 95

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            L   +  I  +  GGGTP+    +N+  ++ GI K    ++N E + E +P++    + 
Sbjct: 96  NLFSEKPKIKELHLGGGTPTFFSAENLEYLIKGIFKIADKAANYEFSFEGHPNNTTREHL 155

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           Q     G  R+S GVQ   E+  + + R             AR+I    +  D+I+ LP 
Sbjct: 156 QALYNVGFRRVSFGVQDYNEKVQKAIHREQPFINVKNVTDAARDIGYTSIGHDIIFGLPH 215

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+   E  + +      D L+ Y                 D  LP+       Y   + 
Sbjct: 216 QTIADVEQTILKTKELMPDRLAFYSYAHVPWLKGNGQRGYNDHDLPTAEEKRMQYESGKK 275

Query: 242 ITSAHGLHAYEISNHS------FLGAES--LHNLNYWRYGD-----YIGIGPGAHSRVKV 288
           + +  G     + + +      F   E+  LH  N+  Y        IG+G  + S    
Sbjct: 276 LLAQVGYEEIGMDHFALKTDTLFKAMENGALHR-NFMGYTSSKTQLMIGLGASSIS---- 330

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
            S        K  E +  +V      +     L+ E       ++ L  R        E 
Sbjct: 331 DSWYSFAQNVKGLEEYEHLVGNAIIPIYRGHILTDEDSIIRKHILNLMCRFETEFTT-EE 389

Query: 349 LAGRNLDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +   +L+   ++   +Q    + ++   +++  ++G   + ++    
Sbjct: 390 IGLLDLNSSFDKLMEMQADDLL-QIDSYKIKVLEKGRPFIRNICMAF 435


>gi|327405106|ref|YP_004345944.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
 gi|327320614|gb|AEA45106.1| oxygen-independent coproporphyrinogen III oxidase [Fluviicola
           taffensis DSM 16823]
          Length = 451

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 76/398 (19%), Positives = 164/398 (41%), Gaps = 20/398 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K+L   + +     S +L +Y+H P+C   C +C  + H+ +    ++ +I + L E Q 
Sbjct: 35  KWLKLIQMSQQKNASKNLSLYIHLPYCDSLCTFCGCHKHITKNHQVEKRYIDAVLKEWQL 94

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L     I+ +  GGGTP+      ++ +++GI   +  + N E++ EA+P+S  + 
Sbjct: 95  LAISLDKNTQINELHLGGGTPTFFAASELSRLIEGIKYIFPFTPNSELSFEAHPNSTSLE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
           + Q   + G  R+S G+Q  +    + + R     +       A+   F  +S DL+Y L
Sbjct: 155 HLQTLHQQGFRRVSFGIQDYDSIVQQAIHRIQTVDQVANCHKNAQETGFTGISHDLVYGL 214

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PKQ +  ++  +Q+ L++    ++LY                 +  LP  ++   LY L 
Sbjct: 215 PKQNLGGFQKTIQQTLNFKPQRIALYSYAHVPWIKGTGQRGYNEEDLPDASLKRQLYELA 274

Query: 240 QSITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
           +      G     + + +          +E   + N+  Y        IG+G  A S  +
Sbjct: 275 KQAFVTEGYIEIGMDHFALPSDSLAIAASEKKLHRNFMGYTTQTSNLLIGLGMSAISECE 334

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +     EK   ++L+++ K    +     +S         ++ L  R    + +  
Sbjct: 335 FGFAQN----EKSVSNYLELIEKGKMPITRGHEMSKGDMEIRQHILNLMCRFETLIPENS 390

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +++   L+++    +     +  +  + +R   +G+  
Sbjct: 391 VISKLELELQLHELITDD--LVEMNQNTVRILPKGIPF 426


>gi|229839869|ref|ZP_04460028.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229696235|gb|EEO86282.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. PEXU2]
          Length = 408

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 85/406 (20%), Positives = 146/406 (35%), Gaps = 76/406 (18%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++                               
Sbjct: 99  LFTGRQVSQMHWGGGTPTYLNKTQISHLMT------------------------------ 128

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
                               LR + R  +     A I  A+   F   + DLIY LPKQT
Sbjct: 129 -------------------VLRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQT 169

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+R      D LS++       +LF    K  D  LP+    +D+   T    
Sbjct: 170 PESFAFTLKRVAELNPDRLSVFNYAHLP-SLFAAQRKIKDADLPTAEQRLDILQHTIRFL 228

Query: 244 SAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKVGS 290
           +  G     + + +    E        +LH  N+  Y      D +G+G  A S +    
Sbjct: 229 TESGYQFIGMDHFARPDDELAIAQQEGTLHR-NFQGYTTQGESDLLGLGVSAISMLGDSY 287

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            +     EK  E++   V + G+A+     ++ +      ++  L     +S +  E   
Sbjct: 288 AQN----EKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRY 343

Query: 351 GRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           G         D E     ++ G +ER +   LR T RG  ++ ++ 
Sbjct: 344 GIRFADYFAEDFELLAPFEQDGLVERNETG-LRVTPRGRLLIRNIC 388


>gi|296447923|ref|ZP_06889832.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
 gi|296254560|gb|EFH01678.1| oxygen-independent coproporphyrinogen III oxidase [Methylosinus
           trichosporium OB3b]
          Length = 448

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 81/392 (20%), Positives = 148/392 (37%), Gaps = 26/392 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
               +L +Y+H PFC   C YC  ++   R      ++ ++ L E++ +   T  R + S
Sbjct: 42  SPQANLSLYLHVPFCPAICTYCGCHTKALRQDAPLTSYKETLLREIELLAATTPARRVRS 101

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I +GGGTPS++ P  +  +   + +++ +   +E  IE +P  V+    +   +AGVNR+
Sbjct: 102 IHWGGGTPSMLGPSRLREVARVLGEHFRMDDALEHAIELDPRLVDPALAEALAEAGVNRV 161

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ       +  GR          + + R      ++FDL+Y LP+Q++       +
Sbjct: 162 SLGVQDFNPHVQKAAGREQPYEVVERCVAILRAAGLTAINFDLMYGLPEQSVEDVIRTAK 221

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++ A    +++                 +  L   N  +      +    A G  A  
Sbjct: 222 LAVALAPSRFAVFGYAHVP-WFAVHQRLIDEAALAGANERLAQAEAVRETLEAAGYEAIG 280

Query: 253 ISNHSFLG------AES--LHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +         A S  LH  N+  Y        +G+G  + +++  G          
Sbjct: 281 LDHFARPDDAMAVAARSGTLHR-NFQGYTTDAADALLGLGVSSIAKLPQGYLGNIGDT-- 337

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---- 355
              +W + V      V      S E +A   ++  L     +         G   D    
Sbjct: 338 --GNWRRAVEAERLPVSRGLAFSGEDRARGAVIERLMCDFSVDFGRVAAAHGFAEDAFDD 395

Query: 356 -IECERNLQRQGFIERVQFSRLRCTQRGMTML 386
            +     L  +G  E +   RL  T+RG    
Sbjct: 396 AVPRLETLLDEGLAE-LSGRRLAVTRRGRPFA 426


>gi|254418128|ref|ZP_05031852.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
 gi|196184305|gb|EDX79281.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           sp. BAL3]
          Length = 459

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 135/397 (34%), Gaps = 25/397 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSI 74
             +  +Y+H PFC + C YC  N+          +++   L E   + +  G P  + SI
Sbjct: 54  DRAASLYLHIPFCKRLCWYCGCNTRAMNRVGVMTSYVDLLLKEADLVLERIGRPVRVGSI 113

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+++ P+ +  +  G+A  + +    EI  E +P  +     +   + G++R S
Sbjct: 114 HLGGGTPNMLPPEELERLFAGLAARFDLGDCFEIAAELDPEVLTQAWVEAAGRIGLSRAS 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           LGVQ L  +    + R  +      A    R      ++ DL+Y LP Q        + +
Sbjct: 174 LGVQDLSPKVQAAVNRPESFETIRWAAEALRGQGVTSLNLDLMYGLPLQGAEHVVTTVAQ 233

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 + ++L+        +        +  LP                   G  A  +
Sbjct: 234 IAVLRPERIALFGYAHVP-WMKPHQKLIKEADLPGPEERFTQSQAAARYLVQKGWQAIGL 292

Query: 254 SNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +               + N+  Y        IG+G  + SR   G  +         
Sbjct: 293 DHFALPHDSMAAAVRAGRLHRNFQGYTTDEAPVLIGLGASSISRTPQGFVQNHAQ----E 348

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--- 358
             W   V      V     L+        ++  L     + V +   + GR+L       
Sbjct: 349 RDWRADVAAGTLPVARGVALNPRDAFLGEIIERLMCDFTVDVAEIARMRGRDLAEVAAVW 408

Query: 359 --ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              +  Q  G IE V  + +  T  G   + +V A  
Sbjct: 409 PRLQRFQLDGLIE-VNGTTVTVTDLGRPFVRAVCAAF 444


>gi|242129439|gb|ACS83774.1| coproporphyrinogen III oxidase [Nonomuraea sp. WU8817]
          Length = 416

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 97/398 (24%), Positives = 174/398 (43%), Gaps = 37/398 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-------NFIQSFLTEMQWMRQLT-- 66
              L +YV+ PFC  KC +CD+   V    +          +++ +  T+++        
Sbjct: 26  DRPLLLYVNIPFCNSKCHFCDWVVDVPVSDLRLAPAAPRRVDYLAALCTQIRTHAPALRA 85

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                  +++GGGT +++    I  +   +A  + +++  E TIE +P SV+    +  R
Sbjct: 86  AGYRGEVMYWGGGTATVLTAAEIEQVHACLAAEFDLTALAEATIEGSPESVDPAKLRLLR 145

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G +R+SLGVQS +E  LR +GR H+A +A+ ++  A    F  ++ DLI   P Q++ 
Sbjct: 146 DLGFDRVSLGVQSFDETRLRRIGRAHSAGQAVRSVEDAHAAGFDNINIDLIVGFPDQSLA 205

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + E  ++RAL   V+H S+Y     +GT+  +  +     +      +  Y L   + +A
Sbjct: 206 EVEQTVRRALDLPVNHFSVYSYRATEGTVMRRQIERSGTAI-ELEHQLQSYRLAGEMLAA 264

Query: 246 HGLHAYEISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHS-----RVKVGSHRVAISIEK 299
            G   Y +S         L +  Y+R   D+IG G GA+S      +  G  R+     +
Sbjct: 265 AGHPEYAVSYFGAP--RCLADEAYYRLSMDWIGFGTGANSLINQRYLLNGRGRMRDFTSR 322

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             E  + +    G   +  ++L             L   EGI    ++   G +L   CE
Sbjct: 323 PGEFEVDLPA--GVPSLTVQWLPR----------ALGTAEGIDAATFQRRTGTSLRAACE 370

Query: 360 RNLQRQGFIERV-QFSRLRCTQRGMTMLD----SVIAN 392
              +   F+ RV +F RL   + G+ + D     V++ 
Sbjct: 371 EP-ELNAFLTRVNEFGRLVVDRDGIRLADENRSDVLSR 407


>gi|329851558|ref|ZP_08266315.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           biprosthecum C19]
 gi|328840404|gb|EGF89976.1| oxygen-independent coproporphyrinogen III oxidase [Asticcacaulis
           biprosthecum C19]
          Length = 458

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 136/373 (36%), Gaps = 24/373 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISS 73
              S+G+YVH PFC + C +C  N+ + R     E ++ + LTE++ +  + G R  + +
Sbjct: 50  PDQSVGLYVHVPFCEQMCWFCGCNTQITRRYDPVEAYVDNLLTEIRLLAGVLGFRPRVHA 109

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGG+P ++ P+++  ++  + + + +  N EI+IE +P  V       Y   G NR+
Sbjct: 110 LHFGGGSPGMLTPESLTRLMTALFETFDIRDNAEISIELDPRRVTREKVLAYALLGFNRV 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ  + Q    + R     +      L R      +  DLIY LP QT    E  L+
Sbjct: 170 SLGVQDTQAQVQAAINRIQPMDQVKKTCDLLRAHDISEIGIDLIYGLPHQTANSLEHTLE 229

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                A + +S +        +           LP        Y    +   A G     
Sbjct: 230 DVAKLAPNRISAFSYAHVP-WVKKHQRLIDATTLPDTGEKALQYLQIDTQLQAMGYAGVG 288

Query: 253 ISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +           +     N+  Y D      IG+G  + S +  G  +        
Sbjct: 289 IDHFARADDGLARAVRDGTLRRNFMGYTDLPNDRLIGLGASSISNLDQGLAQNIAQAT-- 346

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----D 355
             S+   V       V       + +    ++  L       V +     G        +
Sbjct: 347 --SYQSSVTTGVLPTVRGWTYHGDDRVRGEIISQLMCFFRADVGEILTRHGYPFGHLDEE 404

Query: 356 IECERNLQRQGFI 368
           IE        G +
Sbjct: 405 IEALGEYVEAGLV 417


>gi|121997193|ref|YP_001001980.1| coproporphyrinogen III oxidase [Halorhodospira halophila SL1]
 gi|121588598|gb|ABM61178.1| coproporphyrinogen III oxidase, anaerobic [Halorhodospira halophila
           SL1]
          Length = 452

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 142/375 (37%), Gaps = 17/375 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGG 79
           YVH PFC   C YC F  H R        +I   + E++      L G R I +++ GGG
Sbjct: 61  YVHIPFCRGNCLYCGFYRH-RSAAPRLSRYIDWLIEEIRLDAGQPLVGERPIQAVYLGGG 119

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  +++A +L+ + +   ++++ EIT+EA    +     +     GVNR+S+GVQS
Sbjct: 120 TPSDLPAEDLARLLEVLREYLPLAADCEITLEARVVGLNEEKVRAAFAGGVNRVSVGVQS 179

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  R  GR   A E    + L        +  DL++ LP Q M  W  +L       
Sbjct: 180 FDTEVRRRQGRIATAQEVAERLALLSSEEQGAVITDLMFGLPGQDMDSWHRDLDSCQELG 239

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE-NVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +D L  Y L +  GT   K  + G +  P+        Y       +A G      S+ +
Sbjct: 240 LDGLDTYALKLIPGTPLQKQVERGSIEQPAGLPEQAAFYAEAVEALTAAGWRQISNSHWA 299

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL      + +  G GA           + +     E++ + V +    V 
Sbjct: 300 RTPRERNLYNLLIKSGAETLAFGAGAGG----SREPYSYANTPDLEAYERAVSRGDKPVA 355

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECERNLQRQGFIERV 371
                 + Q   + LM G+     + V          +       +        G +   
Sbjct: 356 MMRVSDALQPLRDALMGGV-EVGRLEVPALRARMPMPVRADPRPGQLIERWVEAGLVVWS 414

Query: 372 QFSRLRCTQRGMTML 386
               L  T  G    
Sbjct: 415 GED-LHLTVAGRFWA 428


>gi|57168858|ref|ZP_00367988.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli RM2228]
 gi|305431991|ref|ZP_07401158.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli JV20]
 gi|57019694|gb|EAL56380.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli RM2228]
 gi|304445075|gb|EFM37721.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           coli JV20]
          Length = 451

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 159/395 (40%), Gaps = 25/395 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           + + +L +Y H PFC   C +C  N      +  +E +++    E+  +  +    R + 
Sbjct: 41  KQNKALSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLKYLFQELDILSTIIDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  LIL   +     + + EI+ E +P  +         K G N
Sbjct: 101 QMHFGGGTPTFFSAKQLESLILKIKSVFGNFTKDAEISCEIDPRFLNEEQADVLTKNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A+ L R+     ++ DLIY LP Q++  +   
Sbjct: 161 RISFGVQDFDERVQKEIHRIQPFELTQNALKLVRDRGIKSVNMDLIYGLPFQSLQSFAKT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++A+    D L+++        L   M K  +  LPS +V +++    +   + +G   
Sbjct: 221 LEKAMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLTQNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D IGIG  +                
Sbjct: 280 IGMDHFAKEEDELFKALENGTLHRNFQGYTTKDGADLIGIGLTSIG----EGQSHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     N     
Sbjct: 336 KDMPSYEAAISEGRLPFERGIKLSYDDELRKAVIMDLMANFRLDIKAIEKEFKINFKEYF 395

Query: 359 ERNLQR----QGFIERVQFSRLRCTQRGMTMLDSV 389
           + +L+     + FI+  +   +   + G+ ++ ++
Sbjct: 396 KEDLKALEEYKEFIDLSEN-FILVNETGVLLIRNI 429


>gi|84685201|ref|ZP_01013100.1| coproporphyrinogen III oxidase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84666933|gb|EAQ13404.1| coproporphyrinogen III oxidase [Rhodobacterales bacterium HTCC2654]
          Length = 451

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 148/378 (39%), Gaps = 23/378 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIF 75
           + + +Y+H PFC + C +C   +           ++ S   E++ ++  L    +IS + 
Sbjct: 49  SQISLYLHVPFCRRLCWFCACRTQGTSTLSPVAAYVDSLTQELETLKSHLLPGITISHLH 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+L++P  I  +   I     +  N + ++E +P+ ++         AG+NR SL
Sbjct: 109 WGGGTPTLLDPGMIERLSAAIFDTAPLGENAQFSVEIDPNEIDDARMDALVAAGLNRASL 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  +      +GR        AA+  L       ++ DL+Y LP QT  +    +++ 
Sbjct: 169 GVQDFDPMIQEVIGRPQTFEVTKAAVDGLRARGVQSLNVDLLYGLPHQTNARMTDSVKKV 228

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           LS   D ++L+        +  +        LPS    ++L+NL++ +  A+G     I 
Sbjct: 229 LSLGPDRIALFGYAHVP-WMARRQGLIPTEALPSPEERLELFNLSRDLFVANGFDEIGID 287

Query: 255 NHSFL--GAESLH-----NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +    G    H     + N+  Y +      IGIG  + SR   G  + A +      
Sbjct: 288 HFARPEDGLSKAHKAGTMHRNFQGYTEDSAEALIGIGASSISRYPQGYAQNAPATS---- 343

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           ++ + VR     V      + +      ++  +     + +       G +         
Sbjct: 344 AYQERVRAGQLPVTRGHAFTGDDILRGRVIEQILCDFAVDLPAIAREVGVDPATAVALA- 402

Query: 363 QRQGFIERVQFSRLRCTQ 380
              G +       +  T 
Sbjct: 403 ---GGLAETLPGTVSVTD 417


>gi|255532384|ref|YP_003092756.1| coproporphyrinogen III oxidase [Pedobacter heparinus DSM 2366]
 gi|255345368|gb|ACU04694.1| oxygen-independent coproporphyrinogen III oxidase [Pedobacter
           heparinus DSM 2366]
          Length = 454

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 82/391 (20%), Positives = 149/391 (38%), Gaps = 23/391 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
            + + +Y+H PFC   C YC  N+ + +    ++ ++ + L E Q   +    +  I  +
Sbjct: 50  KDGISLYIHLPFCESLCTYCGCNTRITKNHQVEKPYVDTLLKEWQLYLKQFKTKPLIREL 109

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+    QN+  ++ GI K+  V  +   + EA+P++    +     + G  R+S
Sbjct: 110 HLGGGTPTFFNAQNLEFLIKGILKDAVVHKDAAFSFEAHPANTTTEHLITLNQLGFTRLS 169

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           LG+Q  + +    + R     +       AR      +++DLIY LP Q+ +     ++ 
Sbjct: 170 LGIQDFDPRVQLIINRVQTVEQVEQISRKARENGYKSLNYDLIYGLPHQSFSGLADTIEE 229

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L    D ++ Y           +     +  LP+     +LY L + +    G     +
Sbjct: 230 VLRLRPDRIAFYSYAHVPWVKPGQRR-YTESDLPAPESKEELYKLGRKLLKEGGYTEIGM 288

Query: 254 SNHSFLG--------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +             SLH  N+  Y D      IG+G  A S     S        K 
Sbjct: 289 DHFTLTTDSLYEADQKGSLHR-NFMGYTDQYSRLTIGLGVSAIS----DSWNAFAQNVKT 343

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECE 359
            E++  MV K    V +   L+         ++ +  R   S    E       + +   
Sbjct: 344 VETYTDMVNKGLFPVFKGHLLTETDLLIRKHILNIICRGYTSWTLAEEENEALAEGLIRM 403

Query: 360 RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           R L + G +  +    LR T  G   L ++ 
Sbjct: 404 RWLAQDGLV-FLSAGELRVTGFGKRFLRNIC 433


>gi|126661136|ref|ZP_01732215.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
 gi|126617579|gb|EAZ88369.1| coproporphyrinogen III oxidase [Cyanothece sp. CCY0110]
          Length = 447

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 82/389 (21%), Positives = 172/389 (44%), Gaps = 19/389 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           + +  N+L +Y+H PFC  +C +C+  + V++ +     ++ +   + + ++Q  G    
Sbjct: 48  SRENRNALFLYIHIPFCEMRCGFCNLFTMVQKDEDFVSQYVATLKRQSERVKQALGESKF 107

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGV 130
           +    GGGTP+ +  Q +  +LD        +   +  ++E +P +   +     R  G+
Sbjct: 108 ARFALGGGTPTRLPFQALKAVLDIAENTMGANLQAIPCSVEVSPETATQDKLNLLRDRGI 167

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+GVQS  +  +  + R   A++    +  +    FP ++ DLIY LP QT+  W  
Sbjct: 168 DRISIGVQSFVDTEVLAIQRRQEATQVKEVLTSIKDKNFPTLNIDLIYGLPGQTIDTWLY 227

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            LQ+A+++  + + LY L +   T     +K+ D      ++ ++ Y   +    A+G  
Sbjct: 228 SLQQAIAFQPEEIYLYPLYVRPLTGMDCTNKEWD------DIRLNCYRQGRDFLLANGYQ 281

Query: 250 AYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSH-----RVAISIEKHPES 303
              +         ++    Y    D  +G+G GA S  K   +       A  I+   ++
Sbjct: 282 QISMRMFQKPSNSNISAPVYCCQADGMVGLGCGARSYTKQLHYASEYAVGAKGIQSILQA 341

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECER 360
           +L    ++   +     L +E +   ++++ L   EG+++K +  + G  L I   E   
Sbjct: 342 YLDTPTESFDYINYGFTLDTEDRQRRYILISLLSNEGLNIKQYHHIFGTELLIDYPELTE 401

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            L+R   +       +  T+ G+   D++
Sbjct: 402 LLERN--LAIKDRDTISLTELGIERSDTI 428


>gi|255321395|ref|ZP_05362555.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter showae RM3277]
 gi|255301548|gb|EET80805.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter showae RM3277]
          Length = 350

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 97/324 (29%), Positives = 146/324 (45%), Gaps = 25/324 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGG 78
           +YVH PFC  KCPYC F S V +  +    +  + + + +   ++       I ++F GG
Sbjct: 3   LYVHIPFCESKCPYCAFGSVVGKRNL-TSAYFDAMIADFRGQILKFDVKNGEIETLFIGG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS ++      + + +A    ++ + EIT EANP+S  +      +  GVNR+S G Q
Sbjct: 62  GTPSAVDGSYYERLFEAVAPY--LAKDAEITAEANPNSASLAWLSQMKSYGVNRVSFGAQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  E  L+FLGR H+A +   AI  A+      ++ DLIY     T  + E E Q   + 
Sbjct: 120 SFFEDKLKFLGRIHDARQIYEAIISAKTAGLENINVDLIYGTKLDTKKRLEQEAQNIRNL 179

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            V H+S Y LT+E+ T F                   L           GL  YEISN  
Sbjct: 180 GVSHVSAYSLTLEENTPFAGKISYAKDSP-------RLAKFMIDRIEEVGLKQYEISNF- 231

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G    HNL YW+  +Y+ IG  A    +      A ++  + +        N HA  +
Sbjct: 232 --GQICRHNLGYWQGKNYLAIGAYAVGFWRDHRFYNASNLNAYVK--------NPHA-KK 280

Query: 318 KEFLSSEQQADEFLMMGLRLREGI 341
            E LS+++   E + +G R   GI
Sbjct: 281 IENLSADELNLERIFLGARSIVGI 304


>gi|313896906|ref|ZP_07830453.1| radical SAM domain protein [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312974353|gb|EFR39821.1| radical SAM domain protein [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 551

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 93/402 (23%), Positives = 162/402 (40%), Gaps = 24/402 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ- 64
           A     T   ++    Y+H PFC KKC YC F  +  + +     ++   L E+    + 
Sbjct: 59  AELMAQTPDPADERAAYIHIPFCDKKCSYCGFFQNYTKEEAAH-RYVDVLLQELDAAAET 117

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                    ++FFGGGTP+ +   ++  ++  + +   ++S+ EIT+E     +  +  +
Sbjct: 118 PYVQGAPFQAVFFGGGTPTALSDADLTRLVRAVRERLPLTSDAEITLEGRIHDLTESKVE 177

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQ 182
              +AGVNR SLGVQS + +  + +GR  +    +A +  +       +  DLIY LP Q
Sbjct: 178 AAMRAGVNRFSLGVQSFDTRVRQSIGRIDDHDTVVATLRRMVEKQGAVVIADLIYGLPYQ 237

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQS 241
           +   WE +++      +    LYQL +   +      K GDL +LP+     + +    +
Sbjct: 238 SPEVWENDVRTQFEIGIAGGDLYQLNVFPASELAARIKSGDLPMLPTTEEQSEYFARGIA 297

Query: 242 ITSAHGL-HAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           I   + +    + ++ +    E SL+N    R  D +  G GA   +     R       
Sbjct: 298 IVDTNPMARRIDTTHWATDHRERSLYNTLAKRGDDILAFGSGAGGFIGQIMWRNHGG--- 354

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL---RLREG-ISVKDWEMLAGRNLD 355
              ++ KMV +              +QADE  M      ++  G      +E   G  L 
Sbjct: 355 -LAAYEKMVEEGKKPFQFMG-----EQADEHRMHSEIGDQIEHGYFYAPFFEKKYGVRLL 408

Query: 356 IECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              E  L      G + R +    R TQ G    D++I    
Sbjct: 409 DTMEPLLAVWAENGLVTRTETG-FRLTQAGEFWHDNLIQGFL 449


>gi|254471915|ref|ZP_05085316.1| oxygen-independent coproporphyrinogen III oxidase [Pseudovibrio sp.
           JE062]
 gi|211959117|gb|EEA94316.1| oxygen-independent coproporphyrinogen III oxidase [Pseudovibrio sp.
           JE062]
          Length = 449

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 149/397 (37%), Gaps = 25/397 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
              L +Y+H PFC + C YC  N+   R       +++  L E+  + ++L   R +  I
Sbjct: 44  DTPLSLYLHVPFCQEMCHYCGCNTKATRKMAPVLAYVELMLKEIDLVLKRLGTGREVHHI 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGGTPSL+  +    I+D +  N+  S ++E  IE +P +V     +  + AG+ R S
Sbjct: 104 HWGGGTPSLVPREAFLKIVDKLKANFVFSEDIEHAIELDPRTVGDYLAETLKMAGITRTS 163

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           LGVQ  +E   + +GR    +    A+   RN+    ++FDL+Y LP Q+       ++ 
Sbjct: 164 LGVQDFDEDVQKQIGRIQPYNTVKKAVTALRNVGLHDINFDLMYGLPGQSEKTIRETVEY 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               A   ++L+                 +  LP  N  + L ++++      G     +
Sbjct: 224 TKELAPGRVALFGYAHVP-WFKKHQQLIKEENLPGANERIRLSDVSRDALVEAGYEVIGL 282

Query: 254 SNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +           E     N+  Y        IG G  +   +  G  +   S     
Sbjct: 283 DHFALPTDEMAIALKEGRLRRNFQGYTTDTADTLIGFGCSSIGFLPQGYIQTTPSA---- 338

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC--- 358
             W +MV  +   + +   +         ++M L     +         G  +       
Sbjct: 339 REWERMVVDDVLPIKKGIAVDKVDLCRAEIIMQLMTYYEVDYAATAEKHGLPVSEFASIP 398

Query: 359 --ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              + +   G +  ++ + +  T  G   +  V A  
Sbjct: 399 ADMQEMIADG-VATLEGTVVTVTDAGRRYVRVVAAAF 434


>gi|283956390|ref|ZP_06373870.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|283792110|gb|EFC30899.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 1336]
          Length = 451

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 155/397 (39%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSIFRNFSKDAEISCEIDPRFLNDEQATVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    ++  S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCENFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|226229254|ref|YP_002763360.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
 gi|226092445|dbj|BAH40890.1| oxygen-independent coproporphyrinogen III oxidase [Gemmatimonas
           aurantiaca T-27]
          Length = 483

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/391 (19%), Positives = 149/391 (38%), Gaps = 22/391 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-I 71
           G+    + +YVH PFC  +C YC  N+ V       + ++     E+  + +  G R  +
Sbjct: 51  GRQREPIALYVHLPFCAAQCLYCGCNATVTTRAEIVDRYLSRLRIELDMLARAMGERPRV 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           + + +GGGTP+ +    +A + D +   + + ++ E ++EA+P     +  +  R+ G  
Sbjct: 111 AEMHWGGGTPNFLSDAQLATLHDMLLTTFELGAHTESSLEADPRLTTRSQMRMLRQLGFT 170

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           R+S GVQ L+      +GR    +    A+ LAR   F  ++FDLIY LP QT  ++   
Sbjct: 171 RVSFGVQDLDPVVQEAIGRVQPRAMVQDAVTLAREEGFTGINFDLIYGLPHQTPDRFAAT 230

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ +L+   D ++ +        +     +     LP+      L+          G   
Sbjct: 231 VEDSLAMRPDRIACFGYAHVP-WMRAHQRRIDAQALPNGAERFALFRDAVQRFVGAGYEW 289

Query: 251 YEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIE 298
             I + +             + + N+  Y        +G+G  A S V     + A    
Sbjct: 290 IGIDHFALPTDALTKAMHHGVLHRNFMGYTTQHSPHLLGVGVSAISAVNGWFVQNAPQ-- 347

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
                W + + +    V        + Q     +  L     +    + +   R      
Sbjct: 348 --LGEWQRQIDRGALPVAGGHIQQGDDQGRGAAITHLMCHAALPASLFPV--DREAMQAL 403

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              L   G +     + ++ T +G  +L ++
Sbjct: 404 YAPLVDDGLVT-FDATGMQATDQGRWLLRNL 433


>gi|118589377|ref|ZP_01546783.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
 gi|118438077|gb|EAV44712.1| coproporphyrinogen III oxidase [Stappia aggregata IAM 12614]
          Length = 457

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 151/396 (38%), Gaps = 27/396 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-S 70
           T    +SL +Y+H P+C + C YC  ++   R     + +  +   E+  + +       
Sbjct: 40  TVSSQDSLSLYLHVPYCRELCHYCGCHTKATRQDAPLKAYAATLGQEINLVAEHMPHTGP 99

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  I +GGGTPSL+  +++  +   +  ++ ++ ++E  IE +P  V     +     GV
Sbjct: 100 VRHIHWGGGTPSLLPRESLIDLTGLMRVSFDLAPDLEHAIELDPRLVTEQLAETLAIIGV 159

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR SLGVQ  +    + +GR         A+  LA      ++FDL+Y LP Q+      
Sbjct: 160 NRASLGVQDFDPNVQKAIGRMQPYRVVKQAVEFLAEAGVTALNFDLMYGLPGQSPETILD 219

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +++ LS     ++L+        +        +  LP+    + L +L ++     G  
Sbjct: 220 TVEKTLSLYPGRIALFGYAHVP-WMRKHQRLIDESTLPNAAERLALADLARAELLKAGYI 278

Query: 250 AYEISNHSFL----------GAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISI 297
           A  + + +            G+   +   Y   +    IG G  +  R+  G  +    +
Sbjct: 279 AIGLDHFARPDDSMAIALSDGSLKRNFQGYTTDQGEQLIGFGVSSIGRLSAGYIQNISDV 338

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-- 355
                +W + +      V +   LS++ +    ++  L       +       G      
Sbjct: 339 ----GNWRRAIMAGELPVSKGLALSADDRLRGRIIEELMTNYTCDLTPACRAYGLPTSHL 394

Query: 356 ---IECERNLQRQGFI-ERVQFS--RLRCTQRGMTM 385
               +  ++L   G +   VQ    ++  T+ G   
Sbjct: 395 ADAFDALQDLAADGLVRLDVQGGTAKVEVTEAGRPY 430


>gi|329937448|ref|ZP_08287006.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
 gi|329303324|gb|EGG47211.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
          Length = 457

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/394 (20%), Positives = 153/394 (38%), Gaps = 19/394 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+  G    
Sbjct: 48  AAEDKSALSLYLHIPFCEVRCGFCNLFTRIGAPEGLTGAYLDALERQAGAVREALGEGED 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D            + +++EA+P++   +       
Sbjct: 108 IRFATAAFGGGTPTFLTAPELERLCDIAESRMGARLDAIPLSVEASPATATADRLAVLAD 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  R+SLGVQS  E   R   R    ++  AA+   R    P ++ DLIY +  QT   
Sbjct: 168 RGATRLSLGVQSFVEAEARAAVRPQRRADVEAALARIREARIPVLNIDLIYGIDGQTEET 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL--VLPSENVAVDLYNLTQSITS 244
           W   L  AL++A + L LY L +   T   +             +   + LY   +    
Sbjct: 228 WLHSLDAALAWAPEELYLYPLYVRPLTGLDRHRAASGPARDPAWDAQRLRLYRAGRDHLL 287

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKH--- 300
           A G     +       A      +Y    D  IG+G GA S      +    ++  H   
Sbjct: 288 ARGYTQQSMRMFRRADAPPQGADDYACQTDGMIGLGCGARSYTSALHYSFDYAVGMHAIR 347

Query: 301 --PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE- 357
              + ++    ++         + +++     L+  L   EG++  D++   G+    + 
Sbjct: 348 GIIDDYVAT--EDFTRAEVGHRMDADEARRRHLLQSLLQAEGLAESDYQARFGQAPAEDF 405

Query: 358 --CERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 L  +G++      RLR T  G+   D+V
Sbjct: 406 GSALDVLADRGWLAAAD-GRLRLTPEGLAHSDAV 438


>gi|255008695|ref|ZP_05280821.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313146431|ref|ZP_07808624.1| oxygen-independent coproporphyrinogen II [Bacteroides fragilis
           3_1_12]
 gi|313135198|gb|EFR52558.1| oxygen-independent coproporphyrinogen II [Bacteroides fragilis
           3_1_12]
          Length = 454

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 84/416 (20%), Positives = 156/416 (37%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A + +       +L  Y+H PFC   C YC  NS+        E+++++   EM  
Sbjct: 32  RYLEAVQQS-NKVSERALSFYLHIPFCRHLCHYCGCNSYPMARPEVIESYVKALHQEMDQ 90

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  L    R I+ I +GGG+P+ I    I  +   +  ++ +    EI IE +P  +   
Sbjct: 91  ILPLLDKSRPIAQIHYGGGSPTAIPIALIKELNAHLLSSFRMIDRPEIAIECHPGYLSEK 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D +Y LP
Sbjct: 151 DWLQLTECGFNRVSIGVQDFNIEVLKTVNRRPSLVAMEDIFALLRERGVSINLDFLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQT+  +   +++A+S + D L  +        +  +        LP      ++++   
Sbjct: 211 KQTVESFARSIEQAISLSPDRLVTFSYAHVP-WINKRQLILEKSGLPDNREKRNMFDTAA 269

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            +    G  +  + +      E         LH  N+  Y          G+G  A S++
Sbjct: 270 KLLLESGYQSIGMDHFVRPNDELSIAMQTKKLHR-NFQGYCTRRTTAQVYGLGVTAISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    +      K    +++ + K    + +   LS  +Q    ++  L     I  K  
Sbjct: 329 ESAYAQNT----KDIPHYIETIGKGELCITKGYALSPTEQLTREVIETLMCNGCIDWKAL 384

Query: 347 EML---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       A    D +        G I       L  T  G   + +V A+L
Sbjct: 385 SNRLHVSVPTLKAATAYDEQKLSVFANDGLIYYTD-DYLEMTTEGSAFVRNVAASL 439


>gi|22255838|gb|AAM94763.1| CalE1 [Micromonospora echinospora]
          Length = 441

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/389 (20%), Positives = 140/389 (35%), Gaps = 17/389 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
             +  ++L +YVH PFC  +C +C+  +           +++    + + +   L     
Sbjct: 40  RAEARDALFLYVHVPFCEMRCGFCNLFTRANAPAEQVTGYLRQLRRQAEQVADALGADAG 99

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +   FGGGTP+ +    +A + D            V +++E +P++   +        G
Sbjct: 100 YARAAFGGGTPTYLTADELAELFDIATTTTGARLPGVPLSVETSPATATPDRLAVLAAHG 159

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
             R+S+GVQS  +   R  GR    +E  AA+   R+   P ++ DLIY +  QT   W 
Sbjct: 160 TTRVSIGVQSFLDAEARAAGRPQRRTEVEAALGAIRDARIPVLNIDLIYGIDGQTADTWR 219

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  AL++  + L LY L +   T   +           +   + LY        A G 
Sbjct: 220 ESLDAALAWRPEELYLYPLYVRPLTGLGRRAHHRAE---WDAQRLALYEQAVEALDAAGY 276

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPE 302
               +              +Y    D  +G+G GA S      +          +    +
Sbjct: 277 RQESMRQFRRADVPPPDGPDYCCQDDGMVGLGCGARSYTTSLHYSFDYAVSVTEVRAVLD 336

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECER 360
            +L     +         L   +Q   +L+  L   +G+    +    GR    D     
Sbjct: 337 DYLARPADDFRHAEFGFTLDGAEQRRRWLLKSLLRVDGVDPAAYRARFGRPPGDDFPELG 396

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            L  +G+        LR T  G+   D+V
Sbjct: 397 RLVDRGW---ATDGGLRLTPAGLARSDAV 422


>gi|157415249|ref|YP_001482505.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386213|gb|ABV52528.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|315932119|gb|EFV11062.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 451

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 154/397 (38%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILNTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEEQATVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|297190539|ref|ZP_06907937.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197717853|gb|EDY61761.1| coproporphyrinogen III oxidase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 453

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 82/396 (20%), Positives = 156/396 (39%), Gaps = 15/396 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R+  G   P
Sbjct: 46  AREPKDALSLYLHVPFCEVRCGFCNLFTRIGAPDELTGRYLDALDRQAVAVREALGDGAP 105

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K      S V +++E +P++   +       
Sbjct: 106 VRFAAAAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPATATADRLAVLAD 165

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQ 186
            G  R+S+GVQS  ++  R   R    ++  AA+   R     + + DLIY +  QT   
Sbjct: 166 RGTTRVSIGVQSFIDEEARAAVRPQRRADVEAALGRIREAGIPVLNIDLIYGIDGQTERT 225

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W   L  AL++  + L LY L +   T   ++   GD     +   + LY   +    AH
Sbjct: 226 WLSSLDAALAWEPEELYLYPLYVRPLTGLGRLGAAGDAA--WDEQRLRLYRAGRDHLLAH 283

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEK-HPESW 304
           G     +      GA S  + ++    D  IG+G GA S      +    +++       
Sbjct: 284 GYEQVSMRMFRRAGAPSSASDDHACQTDGMIGLGCGARSYTSSLHYSFDYAVDMGQIRRI 343

Query: 305 LK--MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           +      ++         +  ++     L+  L   EG+ V  +    G          L
Sbjct: 344 IDDFTTAEDFSRAEVGRRVDEDEARRRHLLQSLLQAEGMDVAGYRERFGAVPADHFAAEL 403

Query: 363 QR---QGFIER-VQFSRLRCTQRGMTMLDSVIANLA 394
           +R   +G+++       LR +  G+   D+V   L 
Sbjct: 404 ERFGARGWLDTAAAPGLLRLSAEGLAHSDAVGPELF 439


>gi|298291150|ref|YP_003693089.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
 gi|296927661|gb|ADH88470.1| oxygen-independent coproporphyrinogen III oxidase [Starkeya novella
           DSM 506]
          Length = 454

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 138/378 (36%), Gaps = 24/378 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            ++ +Y+H PFC   C YC   +           +  S   E+    +  GP  +S I +
Sbjct: 52  EAISLYLHVPFCRTICNYCGCTTKAALRDDPVRAYAASIHDEIALFAERLGPVEVSHIHW 111

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P     ++  +   +    ++E  IE +P  V     +     G+NR SLG
Sbjct: 112 GGGTPNILPPDCFEALVRDLGNRFRFRPDMEHAIELDPRHVTAEGARRLADLGINRASLG 171

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+L+    + + R        A+  HL       ++ DL+Y LP QT+       +R L
Sbjct: 172 VQTLDAAVQKAIARIQPLPVVEASFAHLRNAGITAINADLMYGLPLQTLDTIRDTAERVL 231

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +      +++        +        +  LP     +    L + I    G     I +
Sbjct: 232 ALEPSRFAIFGYAHVP-WMKAHQRLIDEAALPDAVERIRQAALAREILERGGYVEIGIDH 290

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +           E   + N+  Y D      IGIG  + SR   G  + A         
Sbjct: 291 FALPDDALTLAQDERRLHRNFQGYTDDAATTLIGIGASSISRTPWGFAQNAPDNH----G 346

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-----DIEC 358
           W + +       V  +    +      ++  L     + + +     G ++     D+  
Sbjct: 347 WRRAIESGRLPTVRGKAYEGDDLLRAAVIEDLLCAFEVDLAEVAARHGASVDGFEDDVRR 406

Query: 359 ERNLQRQGFIERVQFSRL 376
              L   G++E V+ SR+
Sbjct: 407 LAPLVNAGWVE-VRGSRV 423


>gi|253566873|ref|ZP_04844325.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
 gi|251944436|gb|EES84925.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
          Length = 454

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 84/416 (20%), Positives = 158/416 (37%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A + +       +L  Y+H PFC   C YC  NS+        E+++++   E+  
Sbjct: 32  RYLEAVQQS-NQASERALSFYLHIPFCRHLCHYCGCNSYPMARPEIIESYVEALHQEIDL 90

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  L    R I+ I +GGG+P+ I    I  +   +  ++ V    EI IE +P  +   
Sbjct: 91  ILPLLDKDRPIAQIHYGGGSPTAIPVALIKELNAHLLSSFPVIDRPEIAIECHPGYLSEK 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D +Y LP
Sbjct: 151 DWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDFLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQT+  +   +++A+  + D L ++        +  +        LP  +    +++   
Sbjct: 211 KQTVENFTRNIEQAILLSPDRLVMFSYAHVP-WINKRQLLLEKSGLPDNHEKRTMFDTAA 269

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            +    G  +  + +      E         LH  N+  Y          G+G  A S++
Sbjct: 270 GLLHKSGYQSIGMDHFVRPNDELSIAMQTKKLHR-NFQGYCTRRTTAQVYGLGVTAISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    +      K    ++K + K   ++ +   LS  +Q    ++  L     I  +D 
Sbjct: 329 ESAYAQNT----KDIPHYIKTISKGELSITKGYALSPTEQLTREVIETLMCNGCIDWRDL 384

Query: 347 EML---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       A    D +        G I       L  T  G   + +V A+L
Sbjct: 385 SKRLHVSVSTLKAATAYDEKKLSGFADDGLIYYTD-DYLEMTTAGSAFVRNVAASL 439


>gi|182434745|ref|YP_001822464.1| coproporphyrinogen III oxidase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463261|dbj|BAG17781.1| putative oxygen-independent coproporphyrinogen oxidase
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 461

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 159/405 (39%), Gaps = 22/405 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R   G   P
Sbjct: 43  AAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTTRYLDALERQADSVRDALGDEQP 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K        V +++E +P++   +       
Sbjct: 103 VRFAAAAFGGGTPTFLTAGELERLCDTAEKRMGADLGAVPLSVETSPATATADRLAVLAD 162

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  RIS+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 163 RGTTRISIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNIDLIYGIDGQTERS 222

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-------HKDGDLVLPSENVAVDLYNLT 239
           W   L  AL++  + L LY L +   T  +++                 +   + LY + 
Sbjct: 223 WLASLDAALAWRPEELYLYPLYVRPLTGLHRLGPAVTGPEARALEDAAWDEQRLRLYAVG 282

Query: 240 QSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAIS 296
           +    +HG     +       A  E     +Y    D  IG+G GA S      +    +
Sbjct: 283 RDHLLSHGYEQVSMRMFRRADAPREQEGPEDYACQTDGMIGLGCGARSYTSALHYSFDYA 342

Query: 297 IE-KHPESWLKM--VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           +E +   S +      ++        ++ +++     L+  L    G+ V D+    G +
Sbjct: 343 VEMREIRSIIDRFTATEDFSRAEVGRYVDADEARRRHLLQSLLQAAGLPVADYRARFGTD 402

Query: 354 LDIECERNL---QRQGFIERVQFSR-LRCTQRGMTMLDSVIANLA 394
              +    L     +G+++       LR +  G+   D++   L 
Sbjct: 403 PGADFPAELAGFAARGWLDASAPDGLLRLSPSGLAHSDALGPALF 447


>gi|86153005|ref|ZP_01071210.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|121612219|ref|YP_001000671.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|85843890|gb|EAQ61100.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87249310|gb|EAQ72271.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 81-176]
          Length = 451

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 154/397 (38%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNGEQATVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|307747891|gb|ADN91161.1| Oxygen-independent coproporphyrinogen-III oxidase [Campylobacter
           jejuni subsp. jejuni M1]
          Length = 451

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/397 (19%), Positives = 154/397 (38%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILNTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEEQATVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVALSDDDELRKVVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|326775262|ref|ZP_08234527.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326655595|gb|EGE40441.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 461

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 80/405 (19%), Positives = 159/405 (39%), Gaps = 22/405 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R   G   P
Sbjct: 43  AAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTTRYLDALERQADSVRDALGDEQP 102

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +    +  + D   K        V +++E +P++   +       
Sbjct: 103 VRFAAAAFGGGTPTFLTAGELERLCDTAEKRMGADLGAVPLSVETSPATATADRLAVLAD 162

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G  RIS+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY +  QT   
Sbjct: 163 RGTTRISIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNIDLIYGIDGQTERS 222

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-------HKDGDLVLPSENVAVDLYNLT 239
           W   L  AL++  + L LY L +   T  +++                 +   + LY + 
Sbjct: 223 WLASLDAALAWRPEELYLYPLYVRPLTGLHRLGPAATGPKARAREDAAWDEQRLRLYAVG 282

Query: 240 QSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAIS 296
           +    AHG     +       A  E     +Y    D  IG+G GA S      +    +
Sbjct: 283 RDHLLAHGYEQVSMRMFRRTDAPREQEGPEDYACQTDGMIGLGCGARSYTSALHYSFDYA 342

Query: 297 IE-KHPESWLKM--VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           +E +   S +      ++        ++ +++     L+  L    G+ V ++    G +
Sbjct: 343 VEMREIRSIIDRFTATEDFSRAEVGRYVDADEARRRHLLQSLLQAAGLPVAEYRARFGTD 402

Query: 354 LDIECERNL---QRQGFIERVQFSR-LRCTQRGMTMLDSVIANLA 394
              +    L     +G+++       LR +  G+   D++   L 
Sbjct: 403 PGADFPAELAGFAARGWLDASAPDGLLRLSPSGLAHSDALGPALF 447


>gi|312113507|ref|YP_004011103.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218636|gb|ADP70004.1| oxygen-independent coproporphyrinogen III oxidase [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 452

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 140/385 (36%), Gaps = 26/385 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSI 71
                L +Y+H PFC + C YC  N  V         ++++ + E+    +    G   +
Sbjct: 43  DPDTELSLYLHIPFCRRMCWYCGCNMRVIARYSPVTEYVETLIKEIDLACEKLPKGSMKV 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             I +GGGTP+ +  +++  I + +A  + +  N EI +E +P +   +N     K G  
Sbjct: 103 RHIHWGGGTPTALNGEDMVRIHEAVASRFDILPNAEIAVEIDPRTFTQDNADALGKIGCT 162

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R SLG+Q  +      + R          I +        ++FDL+Y LP QT       
Sbjct: 163 RASLGIQEFDITVQEAINRVQPMEVIEDTIRMLHEQNVKGLNFDLMYGLPHQTAEMLTRT 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++A +   D ++L+        +        +  LP+  +  +          A G   
Sbjct: 223 VEQAATLKPDRIALFGYAHVP-WMAKNQRMIPEDALPTALMRFEQATAAGDALEAAGYVR 281

Query: 251 YEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIE 298
             + + +           E   + N+  Y D      +  G  A S    G  +  +   
Sbjct: 282 IGLDHFARPEDSMAIALREGHLHRNFQGYTDDLAGAIVAFGASAISETPEGFMQNIVET- 340

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--- 355
               ++ + V      V +      E +    ++  L     + + +   L   N D   
Sbjct: 341 ---GAYSRAVNSGELPVAKGVTFRGEDKLRSAIIERLMCDMEVDLDEMRRLHAPNRDDFY 397

Query: 356 --IECERNLQRQGFIERVQFSRLRC 378
             +   R LQ +G  E +  S++R 
Sbjct: 398 DELAQLRALQDEGLCE-LDGSKVRV 421


>gi|218702268|ref|YP_002409897.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|218372254|emb|CAR20116.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli IAI39]
          Length = 445

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 150/377 (39%), Gaps = 12/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V      ++
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKPLM 354

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
                +         +        + + +    A +           ++G   R   + L
Sbjct: 355 MIMRNAERDAQWRHTLQSGVETARVPLDELTPHAEK--LAPLLAQWHQKGL-SRDASTCL 411

Query: 377 RCTQRGMTMLDSVIANL 393
           R T  G     +++ +L
Sbjct: 412 RLTNEGRFWASNILQSL 428


>gi|259418972|ref|ZP_05742889.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
 gi|259345194|gb|EEW57048.1| oxygen-independent coproporphyrinogen III oxidase [Silicibacter sp.
           TrichCH4B]
          Length = 462

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 67/352 (19%), Positives = 137/352 (38%), Gaps = 19/352 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
              + + VY+H PFC + C +C   +   +     E++I +   E+  ++Q L     + 
Sbjct: 57  DPRDPVSVYLHIPFCERLCWFCACRTQGTKTLGPVESYITTLEQELALLKQILPAGLRMG 116

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+++ P+ I  +   +      + + E ++E +P+ V+        + G+NR
Sbjct: 117 RMHWGGGTPTILPPELIHRLARAVKAVIPPTGDWEFSVEIDPTMVDRQKIAALAEEGMNR 176

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLG+Q  + +    +GR          +  L       ++ DL+Y LP Q +T+    +
Sbjct: 177 ASLGIQDFDPKVQDAIGRLQPFDVTQQCVEDLRAAGIQSLNADLVYGLPHQDITRLNDTV 236

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + L  A D ++L+        +  +     +  LP E     L     +     G  + 
Sbjct: 237 SKVLDLAPDRIALFGYAHVP-WMSKRQRLIDETALPKEVERFHLAEYAATRFREAGYRSI 295

Query: 252 EISNHSFLG------AESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I + S          E+     N+  Y D      IG+G  + SR+  G  + A +   
Sbjct: 296 GIDHFSKPDDGLARAMETRRLRRNFQGYVDDSCSTLIGLGASSVSRLPTGYIQNASAT-- 353

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
              ++++ ++    A      LS         +  +     + + +     G
Sbjct: 354 --AAYVQRIKAGELAGARGHILSDADLLRARAIEMIMCDFQLDLAELSREFG 403


>gi|50121932|ref|YP_051099.1| coproporphyrinogen III oxidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612458|emb|CAG75908.1| putative coproporphyrinogen oxidase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 437

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 77/387 (19%), Positives = 152/387 (39%), Gaps = 33/387 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E+       L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLRDDS-TATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +          +  DL++ LP QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCGRDRAAVVCDLMFGLPGQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADSGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   +   ++     +E+  E + + + +    + 
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYM----MERSLERYYQQIDQGQKPI- 349

Query: 317 EKEFLSSEQQADEFLMMGL--------RLREGISVKDWE--MLAGRNLDIECERNLQRQG 366
                         +M           +L+ GI V   +   L     +++   +   Q 
Sbjct: 350 -------------MMMTPASSTGPWQHQLQAGIEVGRIKLPQLTQHARELQPLLSQWHQA 396

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +     + LR T  G    ++++  L
Sbjct: 397 GLTCDDSTCLRLTNDGRFWANNLMQAL 423


>gi|323137331|ref|ZP_08072409.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
 gi|322397318|gb|EFX99841.1| oxygen-independent coproporphyrinogen III oxidase [Methylocystis
           sp. ATCC 49242]
          Length = 448

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 90/402 (22%), Positives = 149/402 (37%), Gaps = 32/402 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +L+A +         SL +Y H PFC   C YC  ++   R +     + ++ L E++  
Sbjct: 37  WLAALDE------GASLSLYFHVPFCTAICSYCGCHTKALRQEAPLTAYKETLLRELELT 90

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            Q T  R ++SI +GGGTPS++ P     I + +   + VS   E +IE +P  ++    
Sbjct: 91  AQTTRARRVTSIHWGGGTPSILGPSRFGEIAERVRDLFAVSDETEHSIELDPRILDAALV 150

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPK 181
           +   +AGVNR SLGVQ L        GR         A+ L R      ++ DL+Y LP+
Sbjct: 151 EALARAGVNRASLGVQDLNPHVQEASGRIQPYEIVERAVGLLRAGGIEAINLDLMYGLPR 210

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQ 240
           Q++   E     A       L+++         F    K  D   LP     +      +
Sbjct: 211 QSVADVERTTSLAAGLDPTRLAVFGYAHVP--WFKTHQKLIDAAALPGAAERLAQAAAVR 268

Query: 241 SITSAHGLHAYEISNHSFL------GAESLH-NLNYWRY----GD-YIGIGPGAHSRVKV 288
           +     G  A  + + +         A++ H   N+  Y     D  +  G  +  R+  
Sbjct: 269 ATLERAGYEAIGLDHFARPTDPLAIAAKNGHMRRNFQGYTIDQADALLPFGVSSIGRLPQ 328

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G    A         W + V  +  AV      + E +A   ++  L     +      +
Sbjct: 329 GYVGNAT----DLAGWRRAVEADRFAVTRGLAFTREDRARGEIIERLMCDFAVDYGAMAL 384

Query: 349 LAGRNLDIECER-----NLQRQGFIERVQFSRLRCTQRGMTM 385
             G   D           L   G +  V+   +  T RG   
Sbjct: 385 AHGFAEDAFDAARVPLSALAADG-VVTVEGRSVTVTPRGQPF 425


>gi|297519250|ref|ZP_06937636.1| coproporphyrinogen III oxidase [Escherichia coli OP50]
          Length = 374

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 153/360 (42%), Gaps = 25/360 (6%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            ++ +   E+     L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+
Sbjct: 1   QYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEIS 60

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-F 168
           IE +P  +E++     R  G NR+S+GVQ   ++  R + R  +     A ++ AR I F
Sbjct: 61  IEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGF 120

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
              + DLIY LPKQT   +   L+R      D LS++       T+F    K  D  LPS
Sbjct: 121 TSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLP-TIFAAQRKIKDADLPS 179

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYI 276
               +D+   T +  +  G     + + +           E + + N+  Y      D +
Sbjct: 180 PQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLL 239

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           G+G  A S +     +     +K  + + + V + G+A+     L+ +      ++  L 
Sbjct: 240 GMGVSAISMIGDCYAQN----QKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLI 295

Query: 337 LREGISVKDWEMLAGRNL------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +     E     +       D++    L + G ++  +   ++ T +G  ++ ++ 
Sbjct: 296 CNFRLDYAPIEKQWDLHFADYFAEDLKLLAPLAKDGLVDVDEKG-IQVTAKGRLLIRNIC 354


>gi|146276583|ref|YP_001166742.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17025]
 gi|145554824|gb|ABP69437.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 450

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 143/399 (35%), Gaps = 28/399 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
             +S+ +Y+H PFC + C +C   +           +  +  +E+  +  +L     +S 
Sbjct: 47  AGSSVSLYLHIPFCRRLCWFCACRTQGTSSDAPVRAYAAALKSEIALIHARLAPGVRLSR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+L+ P  I  ++  I          E ++E +P+ ++        +AG+NR+
Sbjct: 107 MHWGGGTPTLLPPDLIRELVLAIRDALPYGPETEFSVEVDPNEIDAARLDALFEAGMNRV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +    + +GR              R      +  D++Y LP QT       +Q
Sbjct: 167 SIGVQDFDPMIQKAIGREQGHDLTRRLTEDLRACGLEGLDIDMLYGLPHQTPQGIAATVQ 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L+ + D +++         +  +        +P     + L+   + +    G     
Sbjct: 227 KLLALSPDRVAVLGYAHVPA-ISRRQLMIPTAAIPRPEERLGLFETARDLILWDGYQPVG 285

Query: 253 ISNHSFLGAESLH-------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           +   +  G    H         ++  Y D      IGIG  A SR   G  + A S   H
Sbjct: 286 LDRFARAGDPLAHARACGRLRRSFAGYTDDRAETLIGIGASAISRFPQGFTQNAPSTSDH 345

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
               L+ +R    +      L+ E +    ++  L     IS          ++  E   
Sbjct: 346 ----LRAIRSGRFSTSRGHALTDEDRLRGRMIEQLLCDFRISRAQILARF--SITPERLE 399

Query: 361 NLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L R       G +E      L  T  G  +   +    
Sbjct: 400 ALFRSCAAAFPGMVEITGHG-LEITGEGRPLTRMIARTF 437


>gi|170749675|ref|YP_001755935.1| coproporphyrinogen III oxidase [Methylobacterium radiotolerans JCM
           2831]
 gi|170656197|gb|ACB25252.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 448

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 80/406 (19%), Positives = 152/406 (37%), Gaps = 24/406 (5%)

Query: 6   AYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-R 63
            Y + + G     +  +Y+H PFC   C YC  ++ + ++      ++ +   E   + R
Sbjct: 34  TYGDWLRGIPADATASLYLHVPFCRSMCWYCGCHTTITQHDAPIAAYLATLQAETVLVAR 93

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     +  + FGGGTP+++ P     ++  +  ++ V+S+ EI +E +P ++     +
Sbjct: 94  HLDRAPRVRHVHFGGGTPTIVTPDAFRELVALLRDHFPVASDAEIAVEIDPRTLTPAMTR 153

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQ 182
               AGV+R SLGVQS +      + R  + +E  AA+   R      ++ DLIY LP Q
Sbjct: 154 ALGAAGVSRASLGVQSFDPVVQDAIRRRQSFAETAAAVAGLRAAGVDGINLDLIYGLPHQ 213

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++      ++++L    D L+++       T         D  LP   V         ++
Sbjct: 214 SVASCVETVRQSLRLRPDRLAVFGYAHVP-TFKKHQRHIEDATLPDGRVRQAQAEAIAAL 272

Query: 243 TSAHGLHAYEISNHSFLG----AESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHR 292
               G     + + +  G            N+  Y        IG G  A  R+  G   
Sbjct: 273 LGEAGYARIGLDHFALPGDALARAGRAVRRNFQGYTTDPSDLLIGFGASAIGRLPQG--- 329

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
             +  +     +   V +   A ++   L+ + +    L+  +     + V        R
Sbjct: 330 -YVQNDPALRGYADRVARGALATLKGYALTPDDRLRADLIERVMCEFRVDVGAVCRAHRR 388

Query: 353 NLDIECER-----NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + D           L   G + R + + L         + SV A  
Sbjct: 389 DPDALLAALPRLPRLLADGLVRR-EGATLHVPDDARAFVRSVAAAF 433


>gi|254509740|ref|ZP_05121807.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacteraceae
           bacterium KLH11]
 gi|221533451|gb|EEE36439.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacteraceae
           bacterium KLH11]
          Length = 451

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 75/390 (19%), Positives = 157/390 (40%), Gaps = 30/390 (7%)

Query: 7   YENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-Q 64
           + + ++G    +S+ +YVH PFC + C +C   +   +       ++     E+  +  +
Sbjct: 38  FGDWVSGITPGSSISLYVHVPFCRRLCWFCACRTQGTQTDNPVIAYVDVLKAELDLLAAR 97

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L    ++S + +GGGTP+L+ P+ +  +   I +   +S N E ++E +P+ ++      
Sbjct: 98  LPAGVTLSRLHWGGGTPTLLSPELMRDLAARILERVPLSRNAEFSVEIDPNEIDEARLDA 157

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
             +AG+NR S+GVQ  +++  + +GR  +      A+ + R      ++ D++Y LP QT
Sbjct: 158 LAEAGMNRASIGVQDFDDEIQKTIGRIQSYDTTRRAVDMIRARGISSLNADILYGLPHQT 217

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +    +Q+ LS   D ++LY        +  +        LP+    ++L+   + + 
Sbjct: 218 RARMTESVQKLLSLTPDRVALYGYAHVP-WMAKRQQLIPSDALPAPEQRLELFETARRLF 276

Query: 244 SAHGLHAYEISNHS----------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
                    I + +            G       N+  Y D      IG+G  + SR   
Sbjct: 277 LWDNYAEIGIDHFATQDDGLTHALRAGRLKR---NFQGYTDDRAPVLIGLGASSISRFPQ 333

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRLREGISVK 344
           G  + A +   H       +R    +         +     +  E LM   R+     ++
Sbjct: 334 GYAQNAPATSAHST----AIRAGRFSTARGHMFKGQDILRSRLIEALMCDFRIDSAEILR 389

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFS 374
           D ++ A +   +    N+  +G +      
Sbjct: 390 DHDISAPQLQQMYTSTNIAFEGLLHVDDNG 419


>gi|170680480|ref|YP_001745771.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170518198|gb|ACB16376.1| putative coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
          Length = 445

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 150/377 (39%), Gaps = 12/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V      ++
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKPLM 354

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
                +         +        + + +    A +           ++G   R   + L
Sbjct: 355 MIMRNAERDAQWRHTLQSGVETARVPLDELTPHAEK--LAPLLAQWHQKGL-SRDASTCL 411

Query: 377 RCTQRGMTMLDSVIANL 393
           R T  G     +++ +L
Sbjct: 412 RLTNEGRFWASNILQSL 428


>gi|301020499|ref|ZP_07184586.1| radical SAM domain protein [Escherichia coli MS 69-1]
 gi|300398687|gb|EFJ82225.1| radical SAM domain protein [Escherichia coli MS 69-1]
          Length = 445

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 151/377 (40%), Gaps = 12/377 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I++ + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIINILREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V      ++
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKPLM 354

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
                +         +        + + +    A +           ++G   R   + L
Sbjct: 355 MIMRNAERDAQWRHTLQSGVETARVPLDELTPHAEK--LAPLLAQWHQKGL-SRDASTCL 411

Query: 377 RCTQRGMTMLDSVIANL 393
           R T  G     +++ +L
Sbjct: 412 RLTNEGRFWASNILQSL 428


>gi|296268533|ref|YP_003651165.1| Coproporphyrinogen dehydrogenase [Thermobispora bispora DSM 43833]
 gi|296091320|gb|ADG87272.1| Coproporphyrinogen dehydrogenase [Thermobispora bispora DSM 43833]
          Length = 404

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 172/391 (43%), Gaps = 23/391 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-------NFIQSFLTEMQWMRQ-LTG 67
           +  L +YV+ PFC  KC +CD+   +    +  +        ++ +   +++     L  
Sbjct: 2   TRPLLLYVNIPFCNSKCHFCDWVVQIPVRDLRLDQQAPGRIAYLDAVRAQIRGQAPVLRE 61

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
               + I++GGGT S++    I  +   +   + +S   E TIE +P S+     +  R+
Sbjct: 62  HYQPAIIYWGGGTASILGESEIESLYTCLRSEFDLSHVRETTIEGSPESLTPQKLRRLRE 121

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G +RIS+GVQS ++Q LR LGR H+A +A+  +  A    F  ++ DLI   P QT  +
Sbjct: 122 LGFDRISIGVQSFDDQRLRRLGRAHSAEQAVEVVKNAHAAGFRNINIDLIVGFPGQTDAE 181

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ AL+  ++H S+Y      GT+  K  + G  +  +  +A   Y +T+ +    
Sbjct: 182 VAESVRTALTLPINHFSIYPYRASPGTILRKQVERGGHLDLNRQLAA--YYITRDLLEEA 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G   Y +S           +  Y+R   D+IG G GA+S +    HR     +    ++ 
Sbjct: 240 GFPEYAMSYFGAP--RCEADQAYYRLTMDWIGFGSGANSLLG---HRYLAFRKGRLHAYN 294

Query: 306 KM-VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           +  +R + +A      L+       +L   L   EG+  + ++   G  L + CE    +
Sbjct: 295 QNPLRFDVNAPASSPQLT-----LHWLSQALTTVEGMDARVYQERTGTPLRVACEEPEVQ 349

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                  +  RL   + G+ +    IA + +
Sbjct: 350 AYLRRMSEHGRLIIDRNGIRIHREDIARVII 380


>gi|126739544|ref|ZP_01755236.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
 gi|126719190|gb|EBA15900.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
          Length = 454

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 153/398 (38%), Gaps = 22/398 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
              + + +YVH PFC K C +C   +   +     E +++   +E+  +  QL     IS
Sbjct: 46  SPGSQISLYVHIPFCRKLCWFCACRTQGTQSNEPIEAYLEVLKSEISLVASQLPEGLEIS 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+++    I  +    A +  +S   E ++E +P  ++        +AG+ R
Sbjct: 106 RLHWGGGTPTILSAAQIRDLAQRFADHLPLSPTTEFSVEVDPWEIDQERCDALLEAGMTR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMEL 191
            S+G+Q   +   + +GR  +  +   A  L R     +++ +++  LP QT        
Sbjct: 166 ASIGIQDFNDHIQQVIGRQQSFEQTNGAARLLRAAGLQKLNAEILCGLPYQTQPSITETT 225

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q  LS   D +++     + G +  +        LP      DL+    ++    G  A 
Sbjct: 226 QLLLSLTPDRVAVSDYIHQPG-MARRQSMIPTDSLPKPEEKFDLFETAAALLRWDGYEAI 284

Query: 252 EISNHSFLG-----AESLHNL--NYWRY-GD----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I + +        A +   L   +  Y  D     IG+G  A SR   G  +   S  K
Sbjct: 285 GIDHFARSDDSLTLARNTGRLRRGFQGYSADPSEVLIGLGASAVSRFPQGYAQNEASTAK 344

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD-WEMLAGRNLDIEC 358
               +   ++K   A         E      L+  L  +  IS  +  +   G    ++ 
Sbjct: 345 ----YSAAIKKGRFATRAGHAFCGEDALRARLIEMLLCQFEISRSEALDEFPGCQAILDP 400

Query: 359 ERNLQRQGF--IERVQFSRLRCTQRGMTMLDSVIANLA 394
             NL  + F     +  +RL  T++   ++  +   + 
Sbjct: 401 LLNLAYRSFPGAMDLSNTRLSLTEQARPLVRVIAQQIF 438


>gi|302344971|ref|YP_003813324.1| coproporphyrinogen dehydrogenase [Prevotella melaninogenica ATCC
           25845]
 gi|302150174|gb|ADK96436.1| coproporphyrinogen dehydrogenase [Prevotella melaninogenica ATCC
           25845]
          Length = 454

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 76/399 (19%), Positives = 153/399 (38%), Gaps = 29/399 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSI 74
             +L  Y H PFC + C YC  NS+    +   E ++Q+   E+  +   +   R IS I
Sbjct: 45  EKNLSFYFHMPFCRRLCHYCGCNSYPMAKEERIEAYVQALHKEIDLVAKHIDKSRRISQI 104

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            +GGG+P+ +    +  + + +   ++     EI IE +P  +   ++QG   A  NR S
Sbjct: 105 HYGGGSPTAMPVSVLKELNEHLLSLFSTIEQPEIAIECHPGYLTAKDWQGLLDARFNRFS 164

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ   E+ LR + R  +       + + RN    ++ D ++ LP QT   ++  ++RA
Sbjct: 165 LGVQDFNEEVLRLVNRTPSELPTEEIVAILRNAGVNINMDFLFGLPLQTSDSFKKTIERA 224

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           ++   D ++ +        +F +        LP       ++   + +    G  +  + 
Sbjct: 225 VAMRPDRVTTFSYG-HCPWIFKRQMILEKAGLPDTEEKALMFQKAKDVLHEAGYLSVGLD 283

Query: 255 NHSFLGAE-------SLHNLNYWRY------GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
           +      E          + N+  Y      G     G    S++     +   SI    
Sbjct: 284 HFVLPNDELSEALQSHRLHRNFQGYCTRRTTGQVYAFGVTGISQLDTAYAQNTKSI---- 339

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM---------LAGR 352
           + ++  V      + +   L+ +++    ++  L     +                    
Sbjct: 340 DEYIAEVSVGTLPIRKGYQLTPKERIVREVIERLMCNYHLDWTHLAEDLAVSVADVKGAI 399

Query: 353 NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           N D+E  + ++R G +   + + L  T  G   + +V A
Sbjct: 400 NYDVERLQEMERDGILCLTENT-LEMTGEGNPFVRTVAA 437


>gi|218515485|ref|ZP_03512325.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 413

 Score =  226 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 131/361 (36%), Gaps = 19/361 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 43  AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R
Sbjct: 103 YVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVAPMIDALAENGVDR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       ++FDLIY LPKQT+      +
Sbjct: 163 ASLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSINFDLIYGLPKQTVQSCIETV 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +   +        G    
Sbjct: 223 RLAAELRPERFAVFGYAHIPA-FKKNQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRI 281

Query: 252 EISNHSFLG------AESL-HNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +         A +     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 282 GLDHFALPNDQLALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +        +   LS E +    ++  L       +      +G +     E
Sbjct: 339 -LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVE 397

Query: 360 R 360
           R
Sbjct: 398 R 398


>gi|283954543|ref|ZP_06372062.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793947|gb|EFC32697.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 451

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 155/397 (39%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           +  + L +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDSFLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLAYIFKELDILNTILDTQRQVV 100

Query: 73  SIFFGGGTPSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  LIL   +     S + EI+ E +P  +         + G N
Sbjct: 101 QMHFGGGTPTFFSAKQLESLILKIKSIFRNFSKDAEISCEIDPRFLNEEQAAVLTQNGFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L        ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    +   S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + K          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEIALDKGILPFERGVILSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFKAYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E       +  + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINLDENFIKVNETGVLLIRNI 429


>gi|218681164|ref|ZP_03529061.1| coproporphyrinogen III oxidase [Rhizobium etli CIAT 894]
          Length = 450

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 72/399 (18%), Positives = 143/399 (35%), Gaps = 25/399 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 43  AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGGTPS+++PQ  + ++  +   +T  +   + +E +P ++         + GV+R
Sbjct: 103 YVHFGGGTPSVMKPQEFSALMAKLRSAFTFEAKAGVAVEIDPRTLVSPMIDALAENGVDR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            SLGVQS +      + R  +  +   A+  L       + FDLIY LPKQT+      +
Sbjct: 163 ASLGVQSFDPIVQAGIKRLQSFEQTERAVAGLRSAGVSSIYFDLIYGLPKQTVKSCIETV 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A     +  +++                 +  LP      +   +        G    
Sbjct: 223 RLAAELRPERFAVFGYAHIPA-FKKHQRLIDEASLPDAKQRNEQAEVIAEELQKAGYLRI 281

Query: 252 EISNHSFLG------AESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + + +         A +     N+  Y        IG+G  A  R+  G  +  +    
Sbjct: 282 GLDHFALPNDQLALAARNRALRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP--- 338

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + + +        +   LS E +    ++  L       +      +G +     E
Sbjct: 339 -LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFLVE 397

Query: 360 RN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           RN     L   G +  +   R+   +    M+ +V A  
Sbjct: 398 RNDRLGELMADG-VVTISGERIVVCEEARFMVRAVAAAF 435


>gi|298481770|ref|ZP_06999960.1| coproporphyrinogen III oxidase family protein [Bacteroides sp. D22]
 gi|298271992|gb|EFI13563.1| coproporphyrinogen III oxidase family protein [Bacteroides sp. D22]
          Length = 424

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 161/403 (39%), Gaps = 32/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LLPYLEQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT      S   GGGTP L+    +  +L+  A      S+   +IE +P   +     
Sbjct: 87  PLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADPARLT 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV+RIS+G+QS   + L  L R         A+   R + FP  + DLIY +  Q
Sbjct: 147 WLKQAGVDRISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFPFFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L + +GT   +           ++V   +Y   + +
Sbjct: 207 TVDSFLYSLEQALLFQPNELFIYPLYVRQGTAITEREP--------DDVCFRMYCTARDL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-- 300
               G    + S   F+   S            +  G G  S +    +    ++ +H  
Sbjct: 259 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVSQHCI 316

Query: 301 ---PESWL----KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
               + ++      V +NG        LS E++   F++  L    G+   +++   G +
Sbjct: 317 AGEIDDYMGTADFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYKRRFGES 370

Query: 354 L-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             DI   R L  + +IE     R+  T  G+   D +   L +
Sbjct: 371 PDDIPLFRQLAERQWIENTD-DRICLTSEGIGYSDYI-GQLFI 411


>gi|84502447|ref|ZP_01000583.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
 gi|84389259|gb|EAQ02056.1| coproporphyrinogen III oxidase [Oceanicola batsensis HTCC2597]
          Length = 451

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 145/359 (40%), Gaps = 20/359 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VYVH PFC + C +C  ++   +     E +++   TE+  +R  L     + 
Sbjct: 46  DPAEPVSVYVHIPFCERLCFFCACHTQGTKTLGPVERYVEVLETEIDLLRVALPPGLRMG 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+++ P  I  +   I + +T +++ E ++E +P+ ++    +  R AG+ R
Sbjct: 106 RMHWGGGTPTILPPALIERLNRAIHRLFTPTASFEFSVEIDPTLIDRAKIEALRAAGLTR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            S+G+Q  + +  + + R  +       +  L       ++ DL+Y LP QTM + E  +
Sbjct: 166 ASIGIQDFDPEVQQAISRLQSFEATRRCVGQLRAAGVTSLNTDLVYGLPHQTMARLEDTI 225

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + LS++ D ++L+        +  +     +  LP E     L     +  ++ G+ A 
Sbjct: 226 DKTLSFSPDRVALFGYAHVP-WVSKRQKLIREATLPDEVARYHLNQRAAARFTSAGMEAI 284

Query: 252 EISNH-------SFLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I +        +          N+  Y D      IG+G  + SR   G  + A +   
Sbjct: 285 GIDHFATPQDALARAKHSPRLRRNFQGYTDDNCQTLIGLGASSISRFPGGYVQNAPAT-- 342

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDIE 357
              ++   +            +          +  L     + + D     G R LD+E
Sbjct: 343 --AAYNARITAGELPGARGYAMDDTDHLHARAIELLMCDFSLDLSDLAQTFGARALDLE 399


>gi|134101096|ref|YP_001106757.1| hypothetical protein SACE_4563 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004084|ref|ZP_06562057.1| hypothetical protein SeryN2_06162 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913719|emb|CAM03832.1| hypothetical protein SACE_4563 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 515

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 81/406 (19%), Positives = 160/406 (39%), Gaps = 23/406 (5%)

Query: 1   MKYLSAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +KYL     +   +G + S  +Y+H PFC + C +C F   +   +   + ++ + L ++
Sbjct: 61  LKYLHDIGEDEVFRGVTASQNLYLHIPFCEQYCTFCHFYKEINAEQSWVDRYVTALLDDI 120

Query: 60  QWMRQLTGPRS-----ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
             + Q    +S      SSI+FGGGTPS +    I  + D + KN     + EIT E +P
Sbjct: 121 SAVAQRVSAQSPLGLNASSIYFGGGTPSYLRAPQITRLFDHLWKNVRTRPDTEITFELHP 180

Query: 115 SSVE----VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFP 169
             V      +        GVNR   G+QS++   L  L R H   E    + L       
Sbjct: 181 GVVRQPDYEDRLDAIAAGGVNRWVFGIQSMDPDVLVKLNRGHGRDEVYRLLGLLEQRGID 240

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DLI+ LP Q +  W   L   ++  ++  +++ L  ++     + +     + P  
Sbjct: 241 NLNVDLIFGLPLQNLRNWYDTLTELMAAGIEKFNIFPLMFKRSDPITRQYMRNPELFPDA 300

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN---YWRYGDYIGIGPGAHSRV 286
              + ++ + + + S+ G     +  ++     S    N        + + +G      +
Sbjct: 301 TDRLRMHYMAEFVLSSAGFARGPVFYYAKGRVHSQQQQNKFDSIEEDNLVALGVSGFGYI 360

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
               +            +++ + +    V     L +E++A   +M G+R   G+     
Sbjct: 361 GGTQYYNLCDN----RQYVEAIAEGRAPVWRGHTLPNEERARRAVMFGIR-SGGVDFDAL 415

Query: 347 EMLAGRN---LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 +   L       L++ G +  V  +R+  T  G T +D +
Sbjct: 416 GRHYEVDAKALFSAEIARLEQLGLVT-VDGARMTLTDLGCTFVDGI 460


>gi|307941450|ref|ZP_07656805.1| oxygen-independent coproporphyrinogen III oxidase [Roseibium sp.
           TrichSKD4]
 gi|307775058|gb|EFO34264.1| oxygen-independent coproporphyrinogen III oxidase [Roseibium sp.
           TrichSKD4]
          Length = 474

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 76/394 (19%), Positives = 151/394 (38%), Gaps = 28/394 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISS 73
            S++L +Y+H P+C + C YC  ++   R +     + ++   E++ +   LT   S+  
Sbjct: 59  PSDTLSLYLHVPYCREICHYCGCHTKATRKEAPLVAYAKTLRQEIELVAAHLTSAGSVRH 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I +GGGTPSL+   ++  I   +   +  +++VE  IE +P +V     +  +K GVNR 
Sbjct: 119 IHWGGGTPSLLPHTDLLQITQDLQDRFQFAADVEHAIELDPRNVTPALAETLQKMGVNRA 178

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ  +    + +GR         A+     +    ++FDL+Y LP+QT       + 
Sbjct: 179 SLGVQDFDLTVQKAIGRVQPFDLVAKAVADLHAVGLTDLNFDLMYGLPEQTRETILDTIT 238

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L      ++L+        +        +  LP     + + +L ++     G  A  
Sbjct: 239 KTLELRPGRIALFGYAHVP-WMRKHQTLMDETRLPDAAERLAMADLARTALQDAGYTAIR 297

Query: 253 ISNHSFLG---AESLH----NLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +      A+ L       N+  Y        IG G  +  ++  G  +    +   
Sbjct: 298 LDHFALPEDSMAQQLEAGDLRRNFQGYTTDQGDQLIGFGVSSIGKLSQGYIQNLPDV--- 354

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD----- 355
              W + +      + +   LS++      ++  L       V+      G         
Sbjct: 355 -GGWRRKIEAGTSPIGKGLALSTDDLLRGRIIEQLMTDYQCDVEKTCGAFGVCTSSLSDC 413

Query: 356 IECERNLQRQGFIERVQFS----RLRCTQRGMTM 385
            +    L   G +   +      R+  T++G   
Sbjct: 414 FDALSGLADDGLVRLSRSGDHGFRVEITEQGQPY 447


>gi|290955363|ref|YP_003486545.1| oxygen-independent coproporphyrinogen III oxidase [Streptomyces
           scabiei 87.22]
 gi|260644889|emb|CBG67975.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Streptomyces scabiei 87.22]
          Length = 456

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 79/391 (20%), Positives = 154/391 (39%), Gaps = 14/391 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
            G+   +L +Y H PFC  +C +C+  + +         ++ +   +   +R+  G   P
Sbjct: 48  AGESRQALSLYAHIPFCEVRCGFCNLFTRIGAPDGLTGRYLDALERQAIAVREALGDEEP 107

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              ++  FGGGTP+ +E   +  + D   ++       + +++EA+P++   +      +
Sbjct: 108 VRFANAAFGGGTPTYLEAAELERLCDIAERHLGADLRAIPLSVEASPATATADRLAVLAE 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQ 186
            G  R+SLGVQS   +  R   R    S+  AA+   R+    + + DLIY +  QT   
Sbjct: 168 RGTTRLSLGVQSFVAEEARAAVRPQRRSDVEAALGRIRDAGLPVLNIDLIYGIDGQTAAS 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W + L  AL++  + + LY L +   T   +           +   +  Y   +    A 
Sbjct: 228 WRLSLDAALAWRPEEIYLYPLYVRPLTGLGRHADPAVADREWDETRLRRYREGRDHLLAQ 287

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV----KVGSHRVAISIEKHP 301
           G     +       A +    ++    D  IG+G GA S          + V +S  +  
Sbjct: 288 GYEQVSMRMFRRADAPAQGPDDHACQTDGMIGLGCGARSYTSRLHYSFDYAVGMSRIRTI 347

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
                     G AV  +E +  ++     L+  L    G+ V ++    G +   +    
Sbjct: 348 IDDYTATEDFGQAVHGRE-VDEDEARRRHLLQSLLQARGMPVAEYRSRFGSDPYADFPAE 406

Query: 362 LQ---RQGFIERVQFSRLRCTQRGMTMLDSV 389
           L+    +G++       LR +  G+   D++
Sbjct: 407 LELLAGRGWLAEAGEGLLRLSGEGLAHSDAI 437


>gi|183220562|ref|YP_001838558.1| coproporphyrinogen III oxidase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910672|ref|YP_001962227.1| coproporphyrinogen III oxidase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775348|gb|ABZ93649.1| Coproporphyrinogen oxidase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778984|gb|ABZ97282.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase; Coprogen oxidase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 446

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 78/388 (20%), Positives = 149/388 (38%), Gaps = 26/388 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR---QLTGPRSI 71
             + L VY+H PFC   C +C  N+ + +    +E ++ +   E+            + +
Sbjct: 44  KESKLAVYLHIPFCETLCTFCGCNTSITKNHTVEEPYVSAIQKELLLYIKNVPSLKGKEL 103

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           S +  GGG+P+ +   N+   ++ I      S N + +IE +P    V+  +  R+ G +
Sbjct: 104 SELHLGGGSPTYLSDYNLQSTIESILNQLAPSQNPQYSIEVDPRRTRVSQLKLLRQLGFH 163

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           RISLGVQ  + +  R + R             AR   F  ++FDLIY LPKQ++   +  
Sbjct: 164 RISLGVQDFDPEVQRLVNRIQPFELTENITLEARALGFDSVNFDLIYGLPKQSLDSMKFT 223

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +++ L    D ++ Y        +        +  LP   +  +LY + +++    G   
Sbjct: 224 IEKTLELKPDRIAFYSYAHVP-WIKASQRLFTENDLPEPTLKRELYEMGRTLLEKEGYRE 282

Query: 251 YEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIE 298
             + + +               + N+  Y D      +G+G  A S       +      
Sbjct: 283 IGMDHFALPHDKLWKAFHSKQLHRNFMGYSDSKTDVMLGLGSSAISETPNLFFQNI---- 338

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K    + K +      ++    L++  Q  + L++ L     + V +      R    E 
Sbjct: 339 KLEMKYRKSLVDGILPILRGHKLTNSDQLRKELILQLMTSWEVKVPNDLQSHVRQFLTEM 398

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTML 386
           E++      +   Q   L  T+ G   L
Sbjct: 399 EKD-----NLVNWQKDTLVVTETGKPFL 421


>gi|114669329|ref|XP_001170144.1| PREDICTED: radical S-adenosyl methionine domain containing 1
           isoform 1 [Pan troglodytes]
          Length = 372

 Score =  225 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 196/347 (56%), Gaps = 18/347 (5%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           +  +TE Q + +L+G + + S+FFGGGTPSL  P  +A +L+ +A+   + ++ E+T+EA
Sbjct: 3   KCLVTEAQTLLRLSGVQRVESVFFGGGTPSLASPHTVAAVLEAVAQTAHLPADSEVTLEA 62

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RM 171
           NP+S   +    +  AGVNR+S+G+QSL++  LR LGR H+A +A+  +  AR +FP R+
Sbjct: 63  NPTSAPGSRLAEFGAAGVNRLSIGLQSLDDTELRLLGRMHSACDALRTLAEARRLFPGRV 122

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DL+  LP Q +  W  +LQ  L +  DHLSLYQL++E+GT  +   + G L  P   +
Sbjct: 123 SVDLMLGLPAQQVGLWLGQLQELLHHCDDHLSLYQLSLERGTALFAQVQRGALPAPDPEL 182

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK---- 287
           A ++Y   +++    G H YE+SN +  GA S HN  YW+ G Y+GIGPGAH R      
Sbjct: 183 AAEMYQRGRAVLREAGFHQYEVSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFMPQGA 242

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  R A      P++W+K V   GH   ++  L   +  +E L +GLR   GI+ + W+
Sbjct: 243 GGHTREARIQTLEPDNWMKEVMLFGHGTRKRVPLGRLELLEEVLALGLRTDVGITHQHWQ 302

Query: 348 ML---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
                       G N +++    L  +G + ++    LRC+  G+ +
Sbjct: 303 QFEPQLTLWDVFGANKEVQ---ELLERGLL-QLDHRGLRCSWEGLAV 345


>gi|57242005|ref|ZP_00369945.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
 gi|57017197|gb|EAL53978.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
          Length = 373

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 153/330 (46%), Gaps = 26/330 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGG 79
           Y+H PFC  KC YC F S   + K  +E +  + + ++++          SI ++F GGG
Sbjct: 24  YIHIPFCESKCHYCSFTS--LKKKDYEEAYFNALIKDIKFQISQFNLSKNSIKTLFIGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++E +    +   +     +    EI+ EANP+S   N  +  ++ G+NR+S G QS
Sbjct: 82  TPSVVEAKYYEKLFQVLTPF--LKEKAEISCEANPNSSNFNWLKAMKELGINRLSFGAQS 139

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL--QRALS 196
            +E+ L+FLGR+H+    + ++ +A+   F  ++ DLIY     T    E EL     + 
Sbjct: 140 FDEKKLKFLGRSHSQKAILKSLEVAKKAGFNNVNLDLIYDTKLDTKKMLEFELFYLEKIK 199

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             ++HLS Y L+IE+ T F K+             A +L           G   YEISN 
Sbjct: 200 IFINHLSAYHLSIEENTAFSKLFHYKK-------NAPNLMRFFIKGIENLGFKQYEISNF 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HNL+YW+  +Y+G G  +    +           K+ + ++K          
Sbjct: 253 SK-NKPCCHNLSYWQGKNYLGAGLSSVGFYENQRFY----THKNLKEYIK-----EPCFR 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           + E LS E    E L +GLR   G+  KD 
Sbjct: 303 KIEHLSLEDLNLERLFLGLRSVVGVKKKDL 332


>gi|320530554|ref|ZP_08031611.1| radical SAM domain protein [Selenomonas artemidis F0399]
 gi|320137227|gb|EFW29152.1| radical SAM domain protein [Selenomonas artemidis F0399]
          Length = 551

 Score =  225 bits (575), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 92/402 (22%), Positives = 161/402 (40%), Gaps = 24/402 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ- 64
           A     T   ++    Y+H PFC KKC YC F  +  + +     ++   L E+    + 
Sbjct: 59  AELMAQTPDPADERAAYIHIPFCDKKCSYCGFFQNYTKEEAAH-RYVDVLLQELDAAAET 117

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                    ++FFGGGTP+ +   ++A ++  + +   ++S+ EIT+E     +  +  +
Sbjct: 118 PYVQGAPFQAVFFGGGTPTALSDADLARLVRAVRERLPLTSDAEITLEGRIHDLTESKVE 177

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQ 182
              +AGVNR SLGVQS + +  + +GR  +    +A +  +       +  DLIY LP Q
Sbjct: 178 AAMRAGVNRFSLGVQSFDTRVRQSIGRIDDHDTVVATLRRMVEKQGAVVIADLIYGLPYQ 237

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQS 241
           +   WE +++      +    LYQL +   +      K GDL +LP+     + +    +
Sbjct: 238 SPEVWENDVRTQFEIGIAGGDLYQLNVFPASELAARIKSGDLPMLPTTEEQSEYFARGIA 297

Query: 242 ITSAHGL-HAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           I   + +    + ++ +    E SL+N    R  D +  G GA   +     R       
Sbjct: 298 IVDENPMARRIDTTHWTTDHRERSLYNTLAKRGNDILAFGSGAGGFIGQMMWRNHGG--- 354

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL---RLREG-ISVKDWEMLAGRNLD 355
              ++ KMV +              +QADE  M      ++  G      +E   G  L 
Sbjct: 355 -LAAYEKMVEEGKKPFQFMG-----EQADEHRMHSEIGDQIEHGYFYAPFFEKKYGVELL 408

Query: 356 ---IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                        G + R +    R TQ G    D++I    
Sbjct: 409 DTMEPLLAAWAENGLVTRTETG-FRLTQAGEFWHDNLIQGFL 449


>gi|207859203|ref|YP_002245854.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206711006|emb|CAR35374.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 413

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|261820817|ref|YP_003258923.1| coproporphyrinogen III oxidase [Pectobacterium wasabiae WPP163]
 gi|261604830|gb|ACX87316.1| Coproporphyrinogen dehydrogenase [Pectobacterium wasabiae WPP163]
          Length = 437

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 77/387 (19%), Positives = 154/387 (39%), Gaps = 33/387 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E+    +  L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLRDDS-TATYTRYLLQELAMEAESPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +          +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   +   ++     +E+  E + + + +    + 
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYM----MERSLERYYQQIDQGQKPI- 349

Query: 317 EKEFLSSEQQADEFLMMGL--------RLREGISVKDWE--MLAGRNLDIECERNLQRQG 366
                         +M           +L+ GI V   +   L     +++   +   Q 
Sbjct: 350 -------------MMMTPASPTGPWQHQLQAGIEVGRIKLPQLTQHARELQPLLSQWHQA 396

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +     + LR T  G    ++++  L
Sbjct: 397 GLTCDDSTCLRLTNDGRFWANNLMQAL 423


>gi|227326144|ref|ZP_03830168.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 437

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 77/387 (19%), Positives = 153/387 (39%), Gaps = 33/387 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E+       L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLRDDS-TATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +          +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   +   ++     +E+  E + + + +    + 
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYM----MERSLERYYQQIDQGQKPI- 349

Query: 317 EKEFLSSEQQADEFLMMGL--------RLREGISVKDWE--MLAGRNLDIECERNLQRQG 366
                         +M           +L+ GI V   +   L     +++   +   Q 
Sbjct: 350 -------------MMMTPASPTGPWQHQLQAGIEVGRIKLPQLTRHARELQPLLSQWHQA 396

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +     + LR T  G    ++++  L
Sbjct: 397 GLTCDDSTCLRLTNDGRFWANNLMQAL 423


>gi|159043212|ref|YP_001532006.1| coproporphyrinogen III oxidase [Dinoroseobacter shibae DFL 12]
 gi|157910972|gb|ABV92405.1| oxygen-independent coproporphyrinogen III oxidase [Dinoroseobacter
           shibae DFL 12]
          Length = 453

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 145/377 (38%), Gaps = 23/377 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS 73
             + + +Y H PFC + C +C   +   +       ++ + L E+  +R  L     +S 
Sbjct: 47  PGSEISLYAHVPFCRRLCWFCACRTQGTQSDAPVRAYVDTLLAEIALLRAALPEGVRLSR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I +GGGTP+L+ P  +  + + +      +   E ++E +P+ ++         AG+NR 
Sbjct: 107 IHWGGGTPTLLAPDLVTRLAEAMFALAPTTDRAEFSVEIDPNEIDAARLDALAAAGMNRA 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +    + +GR        A +  L       ++ D++Y LP QT  +    +Q
Sbjct: 167 SIGVQDFDPDIQKAIGREQRFEVTEAVVMDLRDRGIRSLNTDILYGLPFQTPVKITESVQ 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS   D ++LY        +  + +   +  LP+    +DL+   + +          
Sbjct: 227 KLLSLQPDRVALYGYAHVP-WMARRQNLIPNEALPTPEARLDLFETARRLFRWDNYAEIG 285

Query: 253 ISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +  G       AE   + N+  Y D      IG+G  A SR   G  + A      
Sbjct: 286 IDHFAHQGDGLAVAAAERRLHRNFQGYTDDSATVLIGLGASAISRFPQGYAQNASGT--- 342

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IEC 358
              + K +R  G A V     + +      ++  +     +  ++   +           
Sbjct: 343 -AQYQKAIRAGGFATVRGHDFAGDDAMRARMIEMIMCDFAVDGRELVRVFKVPEARITAL 401

Query: 359 ERNLQRQ--GFIERVQF 373
            R  Q Q  G +E    
Sbjct: 402 FRAAQEQFGGMVELDSG 418


>gi|144900523|emb|CAM77387.1| Oxygen-independent coproporphyrinogen III oxidase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 449

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 144/401 (35%), Gaps = 31/401 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K+LS  +       +  L +Y+H  +C + C +C  ++ + R       ++++ L E++ 
Sbjct: 36  KWLSQLD------PATELSLYLHIAYCAEMCWFCGCHTKITRKYAPVATYLEALLAEVEL 89

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L    +   + FGGG+P+++ P++    ++ + +++ +  + EI +E +P + +  
Sbjct: 90  VAKHLPAKMAARHVHFGGGSPTILTPEDFVRTVETLRQHFILKPDAEIAVELDPRTADET 149

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
             Q     GV R S+GVQ  + +    + R          I   R    P ++ DL+Y L
Sbjct: 150 YVQAMASVGVTRASIGVQDFDPKVQEAINRIQPYDVTANVIEWLRRHGVPEINLDLVYGL 209

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+      + +A  +    ++L+        +        +  LP  +   D Y L 
Sbjct: 210 PYQTVDGLLDTIDKAHGFKPRRIALFGYAHVP-WMKKHQRLIPEAALPDTDTRWDQYELG 268

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVK 287
                  G     + + +          +E   + N+  Y        +G+G      + 
Sbjct: 269 TKRLEDLGYVKIGLDHFAAPDDPLAIALSEKRLHRNFQGYTTDSADVLVGLGASGIGSLP 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G              +L  +R    A      + ++      L+M L     + V    
Sbjct: 329 QGYVANVGETH----HYLDAIRAGRLATSRGVAMDADDHLRRDLIMSLMCDLELDVDAVC 384

Query: 348 MLAGRNL-----DIECERNLQRQGFIERVQFSRLRCTQRGM 383
                +      D+     +   G   R+    +  T  G 
Sbjct: 385 ARHNADPAQFDHDLTKLAPMMEDGL-ARLNGRHIVMTDDGR 424


>gi|319778810|ref|YP_004129723.1| Coproporphyrinogen III oxidase, oxygen-independent [Taylorella
           equigenitalis MCE9]
 gi|317108834|gb|ADU91580.1| Coproporphyrinogen III oxidase, oxygen-independent [Taylorella
           equigenitalis MCE9]
          Length = 454

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 78/409 (19%), Positives = 155/409 (37%), Gaps = 24/409 (5%)

Query: 3   YLSAYENNMTGQGSN-SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           YL + + +     S   + +Y+H PFC + C +C  +  + +    ++ +I++ L E   
Sbjct: 34  YLESLKKSFKESNSKEGISIYIHLPFCEQLCTFCACHKRITKKHTVEDTYIEAVLCEWGL 93

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVE 118
              L     +I  I  GGGTP+   PQN+  +++G+ +     V+     + E +P++  
Sbjct: 94  YLDLFDEVVNIKEIHLGGGTPTFFSPQNLRKLIEGLFEGGRAVVAPGHSFSFEGHPNNTT 153

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           V + +     G  R S GVQ  +    + + R     + +   + AR I F  +S DL++
Sbjct: 154 VEHLKTLYDLGFRRASFGVQDYDPIVQKAINRKQLYDDVVQITNAAREIGFESISHDLVF 213

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q   + E+ +++ +    D L+ Y                 +  LPS      LY 
Sbjct: 214 GLPFQNWERMELTIRKTIDLKPDRLAFYSYAHVPWIKGVGQRGFDEGDLPSGEEKRQLYE 273

Query: 238 LTQSITSAHGLHAYEISNHSFLG---AESLHN----LNYWRYGD-----YIGIGPGAHSR 285
             + +    G     + + S       +S+ N     N+  Y        +G+G  +   
Sbjct: 274 KGKLLLQELGYVEVGMDHFSLPTDELYQSMLNKKIHRNFMGYTSSSTQVMVGLGASSIGD 333

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
              G  +    +E++ E   K     G   +    L+ E       ++ L      S   
Sbjct: 334 SWYGFVQNLKEVEQYYEGLNK-----GFPFLRGHILNKEDLIIRRHILNLMCLLETSWAA 388

Query: 346 WEMLAGRNLDI-ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +       + E    ++  G +E +    +R T +G   + ++    
Sbjct: 389 PSLQFDELPSVLERLEEMKSDGLLE-INPDGIRVTDKGRAYVRNICMAF 436


>gi|255008667|ref|ZP_05280793.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313146401|ref|ZP_07808594.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
 gi|313135168|gb|EFR52528.1| coproporphyrinogen III oxidase [Bacteroides fragilis 3_1_12]
          Length = 426

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 85/392 (21%), Positives = 156/392 (39%), Gaps = 22/392 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L+ Y   + G  +    +Y H PFC  KC YC+  S           ++++   + + + 
Sbjct: 32  LAPYFERLVGGQA---SLYFHIPFCAHKCGYCNLFSQQSCDGGRISAYLRTMRRQAEQLS 88

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                   +S   GGGTP ++  + +  +           S V  +IE +P   +    Q
Sbjct: 89  VAAQDLKFTSFAVGGGTPLILNEKQLDELFCIAELFGVRPSEVFTSIETSPEYADKKVLQ 148

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  GV R+S+GVQS  +  L+ L R    +  I A+   R   FP+++ DLIY +  Q
Sbjct: 149 QLRTRGVERLSMGVQSFNDAELKKLKRRPVLATVIDALQNIREADFPQLNLDLIYGIEGQ 208

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L  AL+Y  D L +Y L +  GT           V  ++++   +Y   + +
Sbjct: 209 TVDSFIHSLTTALTYRPDELFIYPLYVRPGTRI--------DVRSTDDMCYAIYRSAREL 260

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK--- 299
               G      S   F+  +++           +  G G  S +    +    ++ +   
Sbjct: 261 LVEQGFVQ--TSMRRFVKRKTVELEFSCGDETMLSCGSGGRSYLGDLHYATPYAVRQEAI 318

Query: 300 --HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
               + +++    +   V     LS+E+    F++  L    G+   ++E   G+  D  
Sbjct: 319 AGEIDRYIRT--ADFLTVTNGYLLSAEEVQIRFIIKNLMYYRGLDTAEYERRFGKEPDRT 376

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             R    +G+IE  +   L  T+ GM   D +
Sbjct: 377 LFREFTDRGWIEE-KNRVLLLTEEGMAYSDYI 407


>gi|197261819|ref|ZP_03161893.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197240074|gb|EDY22694.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 413

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        +QG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIQQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|160893488|ref|ZP_02074273.1| hypothetical protein CLOL250_01039 [Clostridium sp. L2-50]
 gi|156864883|gb|EDO58314.1| hypothetical protein CLOL250_01039 [Clostridium sp. L2-50]
          Length = 497

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 30/331 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC  +C YC F S+ +  YK   + ++ +   EM+++      + + SI+
Sbjct: 167 NEYCLYIGIPFCPTRCLYCSFTSYPIGVYKDKVDAYLDTMEKEMEYVAASYTEKKLVSIY 226

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTPS I  + +  +   I K++ +S   E TIEA  P S   +  Q  +  GV RIS
Sbjct: 227 IGGGTPSSISAEQMDRLCSMIEKHFDLSQVREYTIEAGRPDSTTADKLQVMKAHGVGRIS 286

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++  ++L+ +GR H   +A  A   AR   F  ++ DLI  LP +     +  L++
Sbjct: 287 INPQTMNGETLKLIGRAHTPEQAEEAFKRAREVGFDNINMDLIVGLPGEDAEMVKRTLEK 346

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-TSAHGLHA-- 250
               A + L+++ L I++     +           +     +    + +  + + L+   
Sbjct: 347 VKKLAPESLTVHTLAIKRAAHLKQEMDKYSFAGDVDEQLSLVGQAAEELGLAPYYLYRQK 406

Query: 251 -----YEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV------------------ 286
                 E   ++  G E L+N+       D IGIG G+ S++                  
Sbjct: 407 NMAGNLENVGYARHGLECLYNILIMEERTDIIGIGAGSSSKLIRREGDSDPVTGEMITGT 466

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           ++       S++ +     +M+ +   A  +
Sbjct: 467 RIDRVENCKSVDDYIARIDEMIDRKKQAFAK 497


>gi|16767277|ref|NP_462892.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167995118|ref|ZP_02576208.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|16422574|gb|AAL22851.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327141|gb|EDZ13905.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261249128|emb|CBG26989.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996297|gb|ACY91182.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160518|emb|CBW20048.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915124|dbj|BAJ39098.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225295|gb|EFX50353.1| Coproporphyrinogen dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323132352|gb|ADX19782.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332990840|gb|AEF09823.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 413

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|62182473|ref|YP_218890.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224585822|ref|YP_002639621.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62130106|gb|AAX67809.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductases [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224470350|gb|ACN48180.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322716968|gb|EFZ08539.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 413

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ Q M     P    S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGQQMA--LAPVHWGSFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQESMHGYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        +QG+  + 
Sbjct: 320 VINHGYLLPPDEIKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPNLERFIQQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|294675410|ref|YP_003576026.1| coproporphyrinogen dehydrogenase [Prevotella ruminicola 23]
 gi|294471993|gb|ADE81382.1| coproporphyrinogen dehydrogenase [Prevotella ruminicola 23]
          Length = 454

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/416 (18%), Positives = 152/416 (36%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL   + +   +  N +  Y+H PFC   C YC  NS+ +      + ++++   E+  
Sbjct: 32  DYLMMVDQSNEAR-QNQISFYLHIPFCRHLCHYCGCNSYPQAKPEVVKAYVEALHKEIDL 90

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   ++  R IS I +GGG+P+ +    I  + + +          EI IE +P  ++ N
Sbjct: 91  VAKHISDDRQISQIHYGGGSPTALPIAMIKELNEHLLSIAPTIERPEIAIECHPGYLDAN 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++Q     G  R SLGVQ L  + L+ + R  +       + +       ++ D +Y LP
Sbjct: 151 DWQQLTACGFTRYSLGVQDLRPEVLKVVNRRESMMPVGEILEMLHESGATVNLDFLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT+  +   +++A ++  D L  +        LF +      + LP+      +Y    
Sbjct: 211 LQTIDSFRNTIEQAAAWRPDRLVTFSYAHLPK-LFPRQQILDKVGLPANQEKNGMYETAT 269

Query: 241 SITSAHGLHAYEISNHSFL--------GAESLHNLNYWRY------GDYIGIGPGAHSRV 286
            + +A G     + +            G   LH  N+  Y            G    S++
Sbjct: 270 EVLTAAGYQPIGLDHFVLPDDELAVALGKGQLHR-NFQGYCTRRTTAQVYAFGVTGISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +      +   ++++ +      +     L+ +++    ++  L     ++  D 
Sbjct: 329 DDCYAQNG----RDINTYIETLNSGQLYISRGYHLTPQEKLVRQVVETLMCNYTLNWSDV 384

Query: 347 EMLAGRNLDIECER---------NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               G +     E           +Q  G + R     +     G   +  V A L
Sbjct: 385 AAHLGVSAAEVREACGYNETTFSEMQADGLL-RFDDDHIEVNTCGRPFVRCVAAAL 439


>gi|86151059|ref|ZP_01069275.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|205356703|ref|ZP_03223464.1| oxygen independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315124480|ref|YP_004066484.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85842229|gb|EAQ59475.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|205345441|gb|EDZ32083.1| oxygen independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315018202|gb|ADT66295.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
          Length = 451

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 155/397 (39%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         +   N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEKQAIVLTQNSFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R  +      A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    ++  S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCENFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKEDDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVVLSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLKA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|288918579|ref|ZP_06412928.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
 gi|288349979|gb|EFC84207.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
          Length = 438

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 87/406 (21%), Positives = 159/406 (39%), Gaps = 31/406 (7%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A  +    Q  ++L +Y+H P C  +C +C+  +     +     ++ +   +   +   
Sbjct: 33  ALRDVWAAQDRSALFLYLHVPLCEMRCGFCNLFTRTGASEEFTGAYLDALERQAVAVTGA 92

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G  + +++ FGGGTP+ +    +  + D  A+   +   +   +E +P++   +     
Sbjct: 93  LGDAAFATVAFGGGTPTYLTAPELERLCDISARLAPL-GGIPFGVETSPATATADRLTVL 151

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
           R+ G  RIS+GVQS  +   R  GR    +E  AA+   R   FP ++ DLIY +  QT 
Sbjct: 152 RERGTTRISIGVQSFLDVEARAAGRPQRRAEVEAALERIRRAGFPTLNIDLIYGIDGQTA 211

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           T W   L  AL++  + L LY L I   T   +   D D      +    LY L +    
Sbjct: 212 TTWLHSLDAALAWRPEELYLYPLYIRPLTGLARRETDWD------DQRTRLYGLGRDHLL 265

Query: 245 AHGLHAYEISNHSFLGAE-----SLHNLNYWRYGD-YIGIGPGAHSR---------VKVG 289
           AHG     +        +           Y    D  +G+G GA S            VG
Sbjct: 266 AHGYEQVSMRMFRRPPGQQPAPGRASGPEYCCQTDGMVGLGCGARSYTSDLHYSFEYAVG 325

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           + +V   ++ +         + G        L+ +++    L+  L   EG+    +   
Sbjct: 326 TRQVRAILDDYLHEADFTTARVGF------TLTGDERRRRHLIQSLLQAEGLDRIAYRER 379

Query: 350 AGRNLDIEC-ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              +   +        +G++E+   + LR T  G+   D++   L 
Sbjct: 380 FHTDGTADVDLTAFADRGWLEQT-PTTLRLTPEGLAHSDALGPALF 424


>gi|295087727|emb|CBK69250.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides
           xylanisolvens XB1A]
          Length = 413

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/403 (23%), Positives = 159/403 (39%), Gaps = 32/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 19  LLPYLEQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT      S   GGGTP L+    +  +L+  A      S+   +IE +P   +     
Sbjct: 76  PLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADPARLA 135

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV RIS+G+QS   + L  L R         A+   R + FP  + DLIY +  Q
Sbjct: 136 WLKQAGVARISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFPFFNIDLIYGIKGQ 195

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L + +GT   +           ++V   +Y   + +
Sbjct: 196 TVDSFLYSLEQALLFQPNELFIYPLYVRQGTAITERES--------DDVCFRMYCAARDL 247

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK---------VGSHRV 293
               G    + S   F+   S            +  G G  S +          V    +
Sbjct: 248 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGNLHYATRYTVCQRYI 305

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           A  I+ +  +    V +NG        LS E++   F++  L    G+   ++E   G +
Sbjct: 306 AEEIDDYMGTTDFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYERRFGES 359

Query: 354 L-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             DI   R L  + +IE     R+  T  G+   D +   L +
Sbjct: 360 PDDIPLFRQLAERQWIENTD-DRICLTSEGIGYSDYI-GQLFI 400


>gi|204930338|ref|ZP_03221315.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320742|gb|EDZ05944.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 413

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 152/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   + +   V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFEVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALIYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L +Y L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFIYPL----------------YNMPRQENMHSYYVLARDLLCNAGYIQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI-----EKHPESWLKMVRKNGH 313
             A S    +   + + + +G G  S +    +    S       K  ++++     +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWSPNLQTSRKIIQAFIDS--ADKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLELFIRQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|168237627|ref|ZP_02662685.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194737437|ref|YP_002116931.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194712939|gb|ACF92160.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289340|gb|EDY28705.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 413

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 152/383 (39%), Gaps = 40/383 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   + +   V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFEVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-- 256
            + L +Y L                  +P +      Y + + +    G     +     
Sbjct: 219 PEELFIYPL----------------YNMPRQENMHSYYVVARDLLRNAGYTQTSMRRFVL 262

Query: 257 ---SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-----RVAISIEKHPESWLKMV 308
               F  AES    N       + +G G  S +    +         +  K  ++++   
Sbjct: 263 NPAPFAAAESCGFENS------LALGAGGRSYLGNLHYCSPWSSNLQTSRKIIQAFIDS- 315

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQG 366
             +   +     L  ++    F++  L   +G+S+ D++     +   D        RQG
Sbjct: 316 -ADKTVINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLELFIRQG 374

Query: 367 FIERVQFSRLRCTQRGMTMLDSV 389
           +  +   SRLR T+ GM + D +
Sbjct: 375 YCYQ-NGSRLRLTETGMALSDCL 396


>gi|237715151|ref|ZP_04545632.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
 gi|262408898|ref|ZP_06085443.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294810689|ref|ZP_06769337.1| coproporphyrinogen dehydrogenase [Bacteroides xylanisolvens SD CC
           1b]
 gi|229444984|gb|EEO50775.1| coproporphyrinogen III oxidase [Bacteroides sp. D1]
 gi|262353109|gb|EEZ02204.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294442022|gb|EFG10841.1| coproporphyrinogen dehydrogenase [Bacteroides xylanisolvens SD CC
           1b]
          Length = 424

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 92/403 (22%), Positives = 160/403 (39%), Gaps = 32/403 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LLPYLEQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT      S   GGGTP L+    +  +L+  A      S+   +IE +P   +     
Sbjct: 87  PLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADPARLT 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             ++AGV RIS+G+QS   + L  L R         A+   R + FP  + DLIY +  Q
Sbjct: 147 WLKQAGVARISIGIQSFLNEELTALKRRPRQDTINQALETIRKMEFPFFNIDLIYGIKGQ 206

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L++AL +  + L +Y L + +GT   +           ++V   +Y   + +
Sbjct: 207 TVDSFLYSLEQALLFQPNELFIYPLYVRQGTAITEREP--------DDVCFRMYCAARDL 258

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH-- 300
               G    + S   F+   S            +  G G  S +    +    ++ +H  
Sbjct: 259 LKDRGF--LQTSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGHLHYATRYTVSQHCI 316

Query: 301 ---PESWL----KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
               + ++      V +NG        LS E++   F++  L    G+   ++E   G +
Sbjct: 317 AGEIDDYMGTADFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYERRFGES 370

Query: 354 L-DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             DI   R L  + +IE     R+  T  G+   D +   L +
Sbjct: 371 PDDIPLFRQLAERQWIESTD-DRICLTSEGIGYSDYI-GQLFI 411


>gi|168821651|ref|ZP_02833651.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205341842|gb|EDZ28606.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320088417|emb|CBY98176.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductases [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 413

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        +QG+  + 
Sbjct: 320 VIHHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIQQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|126739818|ref|ZP_01755509.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
 gi|126719050|gb|EBA15761.1| coproporphyrinogen III oxidase [Roseobacter sp. SK209-2-6]
          Length = 451

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 150/389 (38%), Gaps = 22/389 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSIS 72
             S  + VY+H PFC + C +C   +   +     E +I +   E+  + ++      + 
Sbjct: 46  DPSVPVSVYIHIPFCERLCWFCACRTQGTQSLSPVEAYIGTLEQELAHVSRIIPQGLRMG 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+++ P  I  +   I   +T + + E ++E +P+ V+ +        G++R
Sbjct: 106 RLHWGGGTPTILPPDLIHRLAKAIKTVFTPTDDWEFSVEIDPTLVDRDKISALAAEGMSR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            S+G+Q  +      +GR+         +  L       ++ DL+Y LP QT  + +  L
Sbjct: 166 ASIGIQDFDPLVQDAIGRSQPYDVTKTCVEDLRAAGITSLNADLVYGLPHQTQARMQDTL 225

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           ++ LS + D ++L+        +  +     +  LP +     L         A G  A 
Sbjct: 226 EKVLSLSPDRIALFGYAHVP-WMAKRQQLIDEATLPGDRDRHALAGQAAEAFEAAGFSAI 284

Query: 252 EISNHSFLG------AESLH-NLNYWRYG-D----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I + +         A S H   N+  Y  D     IG G  + SR   G  + A +   
Sbjct: 285 GIDHFARPDDSLAIAAHSAHLRRNFQGYTVDTCPALIGFGASSISRFPGGYVQNAPATP- 343

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDI 356
              +++K V +   A      ++ E       +  +     +  K+  +  G     L+ 
Sbjct: 344 ---AYVKRVEEGRLAGARGHEMTQEDLLRARAIEMIMCDFRVDRKELSLTFGNLSEVLEP 400

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +  +   R G +  +    L     G  +
Sbjct: 401 DLLKAAARFGDLVTLNNEVLEIHPDGRPL 429


>gi|197106267|ref|YP_002131644.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
 gi|196479687|gb|ACG79215.1| oxygen-independent coproporphyrinogen III oxidase [Phenylobacterium
           zucineum HLK1]
          Length = 458

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/411 (18%), Positives = 153/411 (37%), Gaps = 31/411 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            +L+A         ++ + +Y+H PFC + C YC  N+           ++Q  L EM  
Sbjct: 45  DWLAAL------PPADPVSLYLHIPFCARLCWYCGCNTRAVNRHEPVREYVQLLLAEMGL 98

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           ++Q L      ++I FGGGTP+++    +A I   +   + ++ + E+  E +P+ +  +
Sbjct: 99  LQQALPAKLKATAIHFGGGTPNMLSVDELAAIFGALDNVFALAPDREVAAELDPAVLTRD 158

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +     G+NR SLGVQ+L+ +    + R  +  +    +   R    R ++ DL+Y L
Sbjct: 159 WVRAAAFHGLNRASLGVQNLDPKVQAAVNRKESFEDIARCVGWLREAGIRSLNLDLMYGL 218

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT       +   ++   + ++L+        +        +  LP     +      
Sbjct: 219 PHQTTEATLSTVDAIVALRPERIALFGYAHVP-WMKAHQQLIEEKALPGPAERLAQSEAA 277

Query: 240 QSITSAHGLHAYEISNHSFLG---AESLH----NLNYWRY-----GDYIGIGPGAHSRVK 287
               +A G     + + +      A++L       N+  Y        +G+G  A   + 
Sbjct: 278 AERLAAEGYVRIGLDHFALETDEMAQALSDGGLRRNFQGYTTDAADTLLGLGCSAIGSLP 337

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +           W   VR+    +     +S + +    ++  L     + +    
Sbjct: 338 QGYAQNIAQEV----GWRAAVREGRLPIARGVAVSPDDRFRREIIERLMCDLHVDLGAVC 393

Query: 348 MLAGRNL-----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              GR+L      +E        G + R     L     G  ++ S+ A  
Sbjct: 394 AAHGRDLADLAPALEKLAPFFADGLVRR-DGGTLVVEGAGRLVIRSICAAF 443


>gi|148926098|ref|ZP_01809784.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845577|gb|EDK22669.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 451

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/397 (19%), Positives = 155/397 (39%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         +   N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEKQAIVLTQNSFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R  +      A++L R      ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    ++  S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCENFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKEDDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVVLSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLRA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|306816147|ref|ZP_07450285.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|305850543|gb|EFM51000.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
          Length = 445

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 151/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++  I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLTRIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|53713204|ref|YP_099196.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
 gi|52216069|dbj|BAD48662.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis YCH46]
          Length = 454

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/416 (19%), Positives = 158/416 (37%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A + +      ++L  Y+H PFC   C YC  NS+        E+++++   E+  
Sbjct: 32  RYLEAVQQS-NQASEHALSFYLHIPFCRHLCHYCGCNSYPMARPEIIESYVEALHQEIDL 90

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  L    R I+ I +GGG+P+ I    I  +   +  ++      EI IE +P  +   
Sbjct: 91  ILPLLDKDRPIAQIHYGGGSPTAIPVALIKELNAHLLSSFPAIDRPEIAIECHPGYLSEK 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D +Y LP
Sbjct: 151 DWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDFLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQT+  +   +++A+  + D L ++        +  +        LP  +    +++   
Sbjct: 211 KQTVENFTRNIEQAILLSPDRLVMFSYAHVP-WINKRQLLLEKSGLPDNHEKQTMFDTAA 269

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            +    G  +  + +      E         LH  N+  Y          G+G  A S++
Sbjct: 270 GLLHKSGYQSIGMDHFVRPNDELSIAMQTKKLHR-NFQGYCTRRTTAQVYGLGVTAISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    +      K    ++K + K   ++ +   LS  +Q    ++  L     I  +D 
Sbjct: 329 ESAYAQNT----KDIPHYIKTISKGELSITKGYALSPTEQLTREVIETLMCNGCIDWRDL 384

Query: 347 EML---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       A    D +        G I       L  T  G   + +V A+L
Sbjct: 385 SKRLHVSVSTLKAATAYDEKKLSGFADDGLIYYTD-DYLEMTTAGSAFVRNVAASL 439


>gi|301162891|emb|CBW22438.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 638R]
          Length = 413

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 157/399 (39%), Gaps = 26/399 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y   + G+ +    +Y H PFC  KC YC+  S           ++ +   + + + 
Sbjct: 19  LSPYLERLEGREA---SLYFHIPFCAHKCGYCNLFSQQCCDAERISLYLHTMRRQAEQLS 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                   +S   GGGTP +++   +  +           S V  ++E +P   + +  +
Sbjct: 76  VAAQGLKFTSFAVGGGTPLILDEGQLEELFCLAELFGVHPSRVFTSVETSPEYTQKSVLR 135

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  GV R+S+GVQS  E  L+ L R       + A+       FP+ + DLIY +  Q
Sbjct: 136 QLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIYGIEGQ 195

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y   + +
Sbjct: 196 TVESFMRSLNTALTYRPNELFIYPLYVRPGTRI--------DVRSTDDIGYAIYKSAREL 247

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI------- 295
               G      S   F+  E+      +  GD + +  GA  R  +G+   A        
Sbjct: 248 LVGQGFVQ--TSMRRFVRRETTETE--FSCGDEVMLSCGAGGRSYLGNLHYATPYAVRQQ 303

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +I    + +++    +         LS+E+    F++  L    G+ + ++E   G   D
Sbjct: 304 TIADEIDHYIRT--TDFMTAANGFLLSTEEMQIRFIIKNLMYHRGVDLAEYEKRFGEKPD 361

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               R    +G+IE      +R T+ GM   D +     
Sbjct: 362 RNLFREFTDRGWIEET-GRIVRLTEEGMAYSDYIGQAFI 399


>gi|109947404|ref|YP_664632.1| coproporphyrinogen III oxidase [Helicobacter acinonychis str.
           Sheeba]
 gi|109714625|emb|CAJ99633.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           acinonychis str. Sheeba]
          Length = 457

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 138/374 (36%), Gaps = 20/374 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ- 64
           A+ ++   +    L +Y H PFC   C +C  +      +  +  +I     E+  +++ 
Sbjct: 40  AFFSHDNLKNPMPLSLYTHLPFCRSACYFCACSVIYTSLEEKKIRYISYLKKELALLKKA 99

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQ 123
           +   R ++   +GGGTP+   P  +  I   I +     S ++E++ E +P     N+ Q
Sbjct: 100 MDTNREVAQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKNHMQ 159

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
                G NR+S GVQ  + +  + + R         A+ LAR+     ++FDLIY LP Q
Sbjct: 160 TLFDRGFNRLSFGVQDFDFEVQKAIHRIQPFEMVQDAVKLARDYGIKSINFDLIYGLPNQ 219

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T   +   L+  L    D L+++        +   M K  + +LPS    +++     S 
Sbjct: 220 TKESFLKTLEWVLKLDPDRLAVFNYAHVP-WVKKTMRKIDETLLPSPKDKLEILEALISF 278

Query: 243 TSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
                     + + +    E       +    N+  Y        IGIG  +        
Sbjct: 279 LEKAHYQMIGMDHFAKSDNELYLALQKAELRRNFQGYTTKKFTQTIGIGVTSIG----EG 334

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                   K    + K +      V     L+ E    + ++M +     +     E   
Sbjct: 335 GDYYTQNYKDLHHYEKALDLGLLPVERGVALTQEDVLRKEVIMQMMSNLKLDYSKIEEKF 394

Query: 351 GRNLDIECERNLQR 364
             +     ++ L++
Sbjct: 395 SIDFRAYFKKELEK 408


>gi|265763300|ref|ZP_06091868.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_16]
 gi|263255908|gb|EEZ27254.1| oxygen-independent coproporphyrinogen III oxidase [Bacteroides sp.
           2_1_16]
 gi|301162929|emb|CBW22476.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis 638R]
          Length = 454

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/416 (19%), Positives = 158/416 (37%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A + +      ++L  Y+H PFC   C YC  NS+        E+++++   E+  
Sbjct: 32  RYLEAVQQS-NQASEHALSFYLHIPFCRHLCHYCGCNSYPMARPEIIESYVEALHQEIDL 90

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  L    R I+ I +GGG+P+ I    I  +   +  ++      EI IE +P  +   
Sbjct: 91  ILPLLDKDRPIAQIHYGGGSPTAIPVALIKELNAHLLSSFPAIDRPEIAIECHPGYLSEK 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D +Y LP
Sbjct: 151 DWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDFLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQT+  +   +++A+  + D L ++        +  +        LP  +    +++   
Sbjct: 211 KQTVENFTRNIEQAILLSPDRLVMFSYAHVP-WINKRQLLLEKSGLPDNHEKQTMFDTAA 269

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            +    G  +  + +      E         LH  N+  Y          G+G  A S++
Sbjct: 270 GLLHKSGYQSIGMDHFVRPNDELSIAMQTKKLHR-NFQGYCTRRTTAQVYGLGVTAISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    +      K    ++K + K   ++ +   LS  +Q    ++  L     I  +D 
Sbjct: 329 ESAYAQNT----KDIPHYIKTISKGELSITKGYALSPTEQLTREVIETLMCNGCIDWRDL 384

Query: 347 EML---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       A    D +        G I       L  T  G   + +V A+L
Sbjct: 385 SKRLHVSVSTLKAATAYDEKKLSGFADDGLIYYTD-DYLEMTTAGSAFVRNVAASL 439


>gi|323188903|gb|EFZ74187.1| radical SAM superfamily protein [Escherichia coli RN587/1]
          Length = 419

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 153/391 (39%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I++ + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIINTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 326

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 327 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 373 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 402


>gi|305431671|ref|ZP_07400840.1| possible coproporphyrinogen dehydrogenase [Campylobacter coli JV20]
 gi|304445266|gb|EFM37910.1| possible coproporphyrinogen dehydrogenase [Campylobacter coli JV20]
          Length = 355

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 147/329 (44%), Gaps = 26/329 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           + +Y+H PFC  KC YC F S   +    +  + ++   ++ +  Q       SI ++F 
Sbjct: 1   MHLYIHIPFCESKCHYCAFTS--LKKHDYENRYFEALYEDISFHLQKLNIKKNSIKTLFI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  +N  +IL  +     +S N+E + EANP+S ++   +  +  G+NRIS G
Sbjct: 59  GGGTPSAVSAKNFEMILTLLEPF--LSKNIEFSSEANPNSADIEWLKTMKNLGLNRISFG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS   + L FLGR H+      A+       F +++ DLIY          E EL++  
Sbjct: 117 AQSFHPKKLEFLGRIHDQKMIFKALENVNKLGFKKINLDLIYDTKLDDKKMLEFELEQLK 176

Query: 196 SYA--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + HLS Y LTIE  + F K              A  L           G   YEI
Sbjct: 177 QIKNLITHLSAYNLTIEPLSAFAKKEHFKK-------NAPYLMKFFIQELQNLGFLQYEI 229

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN +   A+   HNL YW+  DY+G G  A S  K      A +++ + ++ +       
Sbjct: 230 SNFAKNNAQICKHNLAYWKGLDYLGCGLSAVSCYKNERFYTAKNLKSYLQNPIFR----- 284

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGI 341
               + E L+ E    E L +GLR   GI
Sbjct: 285 ----DVEKLNQEDLNLEHLFLGLRSIVGI 309


>gi|253689126|ref|YP_003018316.1| Coproporphyrinogen dehydrogenase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755704|gb|ACT13780.1| Coproporphyrinogen dehydrogenase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 437

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/387 (19%), Positives = 153/387 (39%), Gaps = 33/387 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E+       L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLRDDS-TATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +          +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWREDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   +   ++     +E+  E + + + +    + 
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYM----MERGLERYYQQIDQGQKPI- 349

Query: 317 EKEFLSSEQQADEFLMMGL--------RLREGISVKDWE--MLAGRNLDIECERNLQRQG 366
                         +M           +L+ GI V   +   L     +++   +   Q 
Sbjct: 350 -------------MMMTPASPTGPWQHQLQAGIEVGRIKLPQLTQHARELQPLLSQWHQA 396

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +     + LR T  G    ++++  L
Sbjct: 397 GLTCDDSTCLRLTNDGRFWANNLMQAL 423


>gi|242129443|gb|ACS83777.1| coproporphyrinogen III oxidase [Nonomuraea sp. Bp3714-39]
          Length = 403

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 95/391 (24%), Positives = 168/391 (42%), Gaps = 22/391 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWMRQ-LTG 67
           +  L +Y + PFC  KC +CD+   V            G+  ++++  T+++     L  
Sbjct: 2   TKPLLIYANVPFCNSKCHFCDWVVQVPVRDLRLGEQSPGRVAYLEAIRTQIRVQAPALRE 61

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                 +++GGGT S++ P  I  +   ++  + +S+  E TIE +P S++ +  +  R+
Sbjct: 62  HYHPDIVYWGGGTASILGPHEIESLYGTLSAEFDLSTVREATIEGSPESLDRDKLRLLRE 121

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G NRIS+GVQS ++  LR LGR H A +A+ A+  A    F  ++ DLI   P QT  +
Sbjct: 122 LGFNRISIGVQSFDDARLRRLGRAHAADQALTAVQDAHEAGFTNINIDLIVGFPGQTGQE 181

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ AL+  ++H S+Y      GT+  K    G  +    N+ +  Y + + +  A 
Sbjct: 182 VADSVRTALTLPINHFSIYPYRASPGTVLRKQVHRGAQL--DLNLQLQAYGIARELLEAA 239

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   Y +S       +S     Y    D+IG G GA+S +             H  +   
Sbjct: 240 GFPEYAMSYFGHPRCQSDE-AYYQLRMDWIGFGSGANSLIGRRYLSYEKGKLAHYNT--N 296

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            +  + +A      L+       FL   L   EG+  + ++   G  L   C    +   
Sbjct: 297 PLAFDINAPAHSPQLT-----LHFLSQALTTAEGLDARLYQQRTGVPLRTACSHP-EVMT 350

Query: 367 FIERVQF-SRLRCTQRGMTML-DSVIANLAV 395
           ++ER+    RL     G+ +  D +      
Sbjct: 351 YLERMNNHGRLIADHNGIRLHRDDIAQTFIA 381


>gi|197248816|ref|YP_002148930.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197212519|gb|ACH49916.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 413

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        +QG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIQQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NSSRLRLTETGMALSDCL 396


>gi|227112305|ref|ZP_03825961.1| coproporphyrinogen III oxidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 437

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/387 (20%), Positives = 154/387 (39%), Gaps = 33/387 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C F  +  R       + +  L E+       L     I +++FGG
Sbjct: 56  LYLHIPFCATHCTFCGFYQNKLRDDS-TATYTRYLLQELAMEADSPLHQSAPIHAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    ++ I+  I  +  ++ + EIT+E      +         AG NR S+G+Q
Sbjct: 115 GTPTALAADELSQIIRAIRTSLPLAPDCEITVEGRAMDFDDERIDACLDAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + + R  +  ++I  +          +  DL++ LP+QT   W  +L      
Sbjct: 175 TFDTRIRQRMARTSDKQQSIRFLERLCERDRAAVVCDLMFGLPEQTPEIWHEDLAIVSDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A+D + LY L +   T   K  ++  + LP      D Y    +  +  G H    S+ +
Sbjct: 235 ALDGVDLYALNLLPTTPLAKAAENQRVALPDVVARRDFYRTGAAFLADAGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D + +G GA   +   ++     +E+  E + + + +    + 
Sbjct: 295 RTTRERNLYNLLIKQGADCLAMGSGAGGNINGQAYM----MERSLERYYQQIDQGQKPI- 349

Query: 317 EKEFLSSEQQADEFLMMGL--------RLREGISVKDWE--MLAGRNLDIECERNLQRQG 366
                         +M           +L+ GI V   +   L     +++   +   Q 
Sbjct: 350 -------------MMMTPASPTGPWQHQLQAGIEVGRIKLPQLTRHARELQPLLSQWHQA 396

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANL 393
            +     + LR T  G    ++++  L
Sbjct: 397 GLTCDDSTCLRLTNDGRFWANNLMQAL 423


>gi|331685157|ref|ZP_08385743.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
 gi|331077528|gb|EGI48740.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
          Length = 445

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 151/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ G+        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|114571187|ref|YP_757867.1| coproporphyrinogen III oxidase, anaerobic [Maricaulis maris MCS10]
 gi|114341649|gb|ABI66929.1| coproporphyrinogen III oxidase, anaerobic [Maricaulis maris MCS10]
          Length = 441

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 82/405 (20%), Positives = 154/405 (38%), Gaps = 28/405 (6%)

Query: 4   LSAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L+ ++  MT Q  N  L +YVH PFC   C YC  ++ +       E+++ +   +++  
Sbjct: 35  LADWQRWMTQQDKNPALSIYVHIPFCKSMCWYCGCHTTIPNAHRRVEHYLAALDIDIRRR 94

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +   P   +  I FGGG+P +++P+    ++  I  ++ V+ + EI +E +P  ++   
Sbjct: 95  AESAPPDGRVCHIHFGGGSPDMLKPEEFRAVMQQIRASFNVAPDAEIAVELDPRGLDSEL 154

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            Q   + GVNR SLGVQ +  +  + + R        AA    R +    ++ D++Y LP
Sbjct: 155 CQAMAQTGVNRASLGVQDISHEVQKLIHRIQPLEIVQAAADKLRAVGISAINMDMMYGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q++ +             D +S++                 +  LP      D      
Sbjct: 215 AQSVARVCETANAIAGMGADRVSVFGYAHVP-WFKKHQRAIPEERLPGAAERFDQMLAAN 273

Query: 241 SITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKV 288
              S  G       + +           +     N+  Y        IG+G  A S    
Sbjct: 274 HTLSEAGYERIGFDHFARPADPLARAARDGSLRRNFQGYTTDPSTILIGLGASAISECPQ 333

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           G     +  E +P  +   V  N   +V     S  QQA    +  L  +    V+    
Sbjct: 334 G----YVQTEPNPVRYANAVTSNADMIVRGVGRSMAQQAVASRIANLLCQFETEVEP--- 386

Query: 349 LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G  +D+  +   +    + R+   R+  T+ G   + ++ A +
Sbjct: 387 --GDPVDLAKDMLAEA---LVRIDDGRITLTEAGRPYVRNLAARI 426


>gi|253566837|ref|ZP_04844289.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
 gi|251944400|gb|EES84889.1| coproporphyrinogen III oxidase [Bacteroides sp. 3_2_5]
          Length = 426

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 86/399 (21%), Positives = 155/399 (38%), Gaps = 26/399 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y   + G+ +    +Y H PFC  KC YC+  S           ++ +   + + + 
Sbjct: 32  LSPYLERLEGREA---SLYFHIPFCAHKCGYCNLFSQQCCDAERISLYLHTMRRQAEQLS 88

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                   +S   GGGTP +++   +  +           S V  ++E +P   + +  +
Sbjct: 89  VAAQGLKFTSFAVGGGTPLILDEGQLEELFCLAELFGVHPSRVFTSVETSPEYTQKSVLR 148

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  GV R+S+GVQS  E  L+ L R       + A+       FP+ + DLIY +  Q
Sbjct: 149 QLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIYGIEGQ 208

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L  AL+Y  + L +Y L +  GT               +++   +Y   + +
Sbjct: 209 TVESFMRSLNTALTYRPNELFIYPLYVRPGTRINVRST--------DDIGYAIYKSAREL 260

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI------- 295
               G      S   F+  E+      +  GD + +  GA  R  +G+   A        
Sbjct: 261 LVGQGFVQ--TSMRRFVRRETTETE--FSCGDEVMLSCGAGGRSYLGNLHYATPYAVRQQ 316

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +I    + +++    +         LS+E+    F++  L    G+ + ++E   G   D
Sbjct: 317 AIADEIDHYIRT--TDFMTAANGFLLSTEEMQIRFIIKNLMYHRGVDLAEYEKRFGEKPD 374

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               R    +G+IE      +R T+ GM   D +     
Sbjct: 375 RNLFREFTDRGWIEET-GRIVRLTEEGMAYSDYIGQAFI 412


>gi|91213008|ref|YP_542994.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117625785|ref|YP_859108.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218560578|ref|YP_002393491.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|237703269|ref|ZP_04533750.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|331659808|ref|ZP_08360746.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
 gi|91074582|gb|ABE09463.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli UTI89]
 gi|115514909|gb|ABJ02984.1| putative oxygen independent coproporphyrinogen III oxidase ChuW
           [Escherichia coli APEC O1]
 gi|218367347|emb|CAR05126.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli S88]
 gi|226902533|gb|EEH88792.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|294491802|gb|ADE90558.1| HugW [Escherichia coli IHE3034]
 gi|307628582|gb|ADN72886.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315286173|gb|EFU45609.1| radical SAM domain protein [Escherichia coli MS 110-3]
 gi|323950177|gb|EGB46060.1| HemN protein [Escherichia coli H252]
 gi|323954735|gb|EGB50516.1| HemN protein [Escherichia coli H263]
 gi|324009284|gb|EGB78503.1| radical SAM domain protein [Escherichia coli MS 57-2]
 gi|331053023|gb|EGI25056.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
          Length = 445

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|284923527|emb|CBG36622.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli 042]
          Length = 445

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLTIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ G+        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|110643748|ref|YP_671478.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|227883662|ref|ZP_04001467.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
 gi|300985061|ref|ZP_07177267.1| radical SAM domain protein [Escherichia coli MS 45-1]
 gi|300987452|ref|ZP_07178220.1| radical SAM domain protein [Escherichia coli MS 200-1]
 gi|301050257|ref|ZP_07197148.1| radical SAM domain protein [Escherichia coli MS 185-1]
 gi|110345340|gb|ABG71577.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli 536]
 gi|222035213|emb|CAP77958.1| oxygen independent coproporphyrinogen III oxidase [Escherichia coli
           LF82]
 gi|227839541|gb|EEJ50007.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
 gi|300298029|gb|EFJ54414.1| radical SAM domain protein [Escherichia coli MS 185-1]
 gi|300306144|gb|EFJ60664.1| radical SAM domain protein [Escherichia coli MS 200-1]
 gi|300408221|gb|EFJ91759.1| radical SAM domain protein [Escherichia coli MS 45-1]
 gi|307555606|gb|ADN48381.1| putative coproporphyrinogen III oxidase [Escherichia coli ABU
           83972]
 gi|312948061|gb|ADR28888.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315291787|gb|EFU51141.1| radical SAM domain protein [Escherichia coli MS 153-1]
 gi|315296048|gb|EFU55357.1| radical SAM domain protein [Escherichia coli MS 16-3]
 gi|324014495|gb|EGB83714.1| radical SAM domain protein [Escherichia coli MS 60-1]
          Length = 445

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 151/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|168467342|ref|ZP_02701179.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195630164|gb|EDX48804.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 413

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        +QG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIQQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NSSRLRLTETGMALSDCL 396


>gi|315651811|ref|ZP_07904815.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           saburreum DSM 3986]
 gi|315485941|gb|EFU76319.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           saburreum DSM 3986]
          Length = 474

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/311 (22%), Positives = 146/311 (46%), Gaps = 18/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +Y+  PFC  +C YC F S+ +  +K   + ++ +   E+  + ++   + + +I
Sbjct: 154 KDGYSLYIGIPFCPTRCLYCSFTSYSIALWKKETDTYVAALCKELTAVSKMFRGKKLQTI 213

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  ILD +  N+ +S+ +E+T+EA  P S+        + +GVNRI
Sbjct: 214 YMGGGTPTSLEAYQLTEILDTVKTNFDLSNLLELTVEAGRPDSITKEKLIALKASGVNRI 273

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +   +  LAR   F  ++ D I  L  +T++  +    
Sbjct: 274 SVNPQTMQQKTLDLIGRKHTTEDIYNSFRLAREAGFTNINMDFIIGLNGETLSDIKDSFI 333

Query: 193 RALSYAVDHLSLYQLTIEK----GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           +    A + ++++ L +++     T   +   D +L+L   +VA +  N        + L
Sbjct: 334 KVKKLAPESITIHSLALKRAAGLNTENKREIVDNELMLSMTDVATNNCNEL--GLKPYYL 391

Query: 249 HA-------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-AISIEK 299
           +         E    S    E L+N+         I  G G  S++     R+  I   K
Sbjct: 392 YRQKNMAGNLENIGFSKPDKECLYNILIMEEKQTIIACGAGTSSKIVFEDGRIERIENVK 451

Query: 300 HPESWLKMVRK 310
            P+ +++ + +
Sbjct: 452 DPKLYIERLDE 462


>gi|293412933|ref|ZP_06655601.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468580|gb|EFF11073.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 445

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 153/391 (39%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I++ + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIINTLREKLPLTPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ G+        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|110678592|ref|YP_681599.1| coproporphyrinogen III oxidase [Roseobacter denitrificans OCh 114]
 gi|109454708|gb|ABG30913.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter
           denitrificans OCh 114]
          Length = 451

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 147/392 (37%), Gaps = 22/392 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFG 77
           + +Y+H PFC + C +C   +           ++ +   E+  +  +  P  S+S + +G
Sbjct: 51  ISLYLHIPFCRRLCWFCACRTQGISNNGPVAAYLSTLKAELSMLAAILPPDISLSRVHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L E   I  +   I     ++ N E ++E +P+ ++ +       AG+ R S+GV
Sbjct: 111 GGTPTLFEAGMIEELAGAINDLAPMAPNGEFSVEVDPNEIDQSRVDALAAAGMTRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  + +    +GR  +      A  + R      ++ D+++ LP QT  +    +Q+ L+
Sbjct: 171 QDFDVEIQTTIGRLQSFDVTRFAADMLRASGVHSLNTDILFGLPHQTTEKIAASVQKLLT 230

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + D ++LY        +  +        LP+    + L+   + +    G     I + 
Sbjct: 231 LSPDRVALYGYAHVP-WMARRQSLIPSDALPAPEERLKLFETARQLFEWDGYRQIGIDHF 289

Query: 257 SFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           +                 N+  Y D      IG+G  A SR   G  +   S       +
Sbjct: 290 AVPHDTLAVAARTGKLRRNFQGYTDEPAEVLIGLGASAISRFPQGYAQNNPSTS----GY 345

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERN 361
            K +R+   +       S + +    L+  +     + + D      +    +     R 
Sbjct: 346 TKSIREGAFSTSRGHCFSEDDRLRGRLIEAIMCDFEVDIDDMISRFPKREAHIRALLARA 405

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               G I +++  R +    G  +   +  + 
Sbjct: 406 AAHFGDIVQLKKDRFQVLPDGHALARIIARHF 437


>gi|53713170|ref|YP_099162.1| coproporphyrinogen III oxidase [Bacteroides fragilis YCH46]
 gi|52216035|dbj|BAD48628.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Bacteroides fragilis YCH46]
          Length = 426

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 86/399 (21%), Positives = 155/399 (38%), Gaps = 26/399 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y   + G+ +    +Y H PFC  KC YC+  S           ++ +   + + + 
Sbjct: 32  LSPYLERLEGREA---SLYFHIPFCAHKCGYCNLFSQQCCDAERISLYLHTMRRQAEQLS 88

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                   +S   GGGTP +++   +  +           S V  ++E +P   + +  +
Sbjct: 89  VAAQGLKFTSFAVGGGTPLILDEGQLEELFCLAELFGVHPSRVFTSVETSPEYTQKSVLR 148

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  GV R+S+GVQS  E  L+ L R       + A+       FP+ + DLIY +  Q
Sbjct: 149 QLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIYGIEGQ 208

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L  AL+Y  + L +Y L +  GT               +++   +Y   + +
Sbjct: 209 TVESFMRSLNTALTYRPNELFIYPLYVRPGTRINVRST--------DDIGYAIYKSAREL 260

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI------- 295
               G      S   F+  E+      +  GD + +  GA  R  +G+   A        
Sbjct: 261 LVGQGFVQ--TSMRRFVRRETTETE--FSCGDEVMLSCGAGGRSYLGNLHYATPYAVRQQ 316

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +I    + +++    +         LS+E+    F++  L    G+ + ++E   G   D
Sbjct: 317 AIADEIDHYIRT--TDFMTAANGFLLSTEEMQIRFIIKNLMYHRGVDLAEYEKRFGEKPD 374

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               R    +G+IE      +R T+ GM   D +     
Sbjct: 375 RNLFREFTDRGWIEET-GRIVRLTEEGMAYSDYIGQAFI 412


>gi|331674993|ref|ZP_08375750.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
 gi|331067902|gb|EGI39300.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
          Length = 445

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLTIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ G+        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|218707132|ref|YP_002414651.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293407121|ref|ZP_06651045.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298382869|ref|ZP_06992464.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300898197|ref|ZP_07116554.1| radical SAM domain protein [Escherichia coli MS 198-1]
 gi|331665122|ref|ZP_08366023.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
 gi|218434229|emb|CAR15147.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli UMN026]
 gi|291425932|gb|EFE98966.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298276705|gb|EFI18223.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300358113|gb|EFJ73983.1| radical SAM domain protein [Escherichia coli MS 198-1]
 gi|331057632|gb|EGI29618.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
          Length = 445

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 90/402 (22%), Positives = 156/402 (38%), Gaps = 41/402 (10%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTG 67
           N T      L +Y+H PFC   C +C F  + R  +    ++  + + E++      L  
Sbjct: 50  NQTASPRKRL-IYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQ 107

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I +++FGGGTPS +   ++A I+  + +   ++ + EITIE    + +     G   
Sbjct: 108 SAPIHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDGCLD 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
           AG NR S+G+QS   +  + + R  +   AIA +  L +     +  DL++ LP Q    
Sbjct: 168 AGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQT 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  +L  A    +D + LY L +   T   K  ++G   +PS     DLY          
Sbjct: 228 WGEDLAIARDIGLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDA 287

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G      S+      E +L+NL   +  D +  G GA   +       +   E++ ++W 
Sbjct: 288 GWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWH 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAG 351
           + V                      LMM +R           L+ G+        E+   
Sbjct: 344 ESVAAGKKP----------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPH 387

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       ++G   R   + LR T  G     +++ +L
Sbjct: 388 AEKLAPLLAQWHQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|191170321|ref|ZP_03031874.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
 gi|190909129|gb|EDV68715.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
          Length = 419

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 151/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 326

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 327 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 373 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 402


>gi|167551508|ref|ZP_02345263.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205323677|gb|EDZ11516.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 413

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 151/378 (39%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +         V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSAFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDGELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHGYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-----RVAISIEKHPESWLKMVRKNGH 313
             A S    +   + + + +G G  S +    +         +  K  ++++   R +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWSSNLQTSRKIIQAFID--RPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|215488780|ref|YP_002331211.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312968176|ref|ZP_07782386.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|215266852|emb|CAS11293.1| putative coproporphyrinogen oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312287001|gb|EFR14911.1| radical SAM superfamily protein [Escherichia coli 2362-75]
          Length = 445

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|60681431|ref|YP_211575.1| coproporphyrinogen III oxidase [Bacteroides fragilis NCTC 9343]
 gi|60492865|emb|CAH07640.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
          Length = 413

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 157/399 (39%), Gaps = 26/399 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y   + G+ +    +Y H PFC  KC YC+  S           ++ +   + + + 
Sbjct: 19  LSPYLERLEGREA---SLYFHIPFCAHKCGYCNLFSQQCCDAERISLYLHTMRRQAEQLS 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                   +S   GGGTP +++   +  +           S V  ++E +P   + +  +
Sbjct: 76  VAAQGLKFTSFAVGGGTPLILDEGQLEELFCLAELFGVHPSRVFTSVETSPEYTQKSVLR 135

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  GV R+S+GVQS  E  L+ L R       + A+       FP+ + DLIY +  Q
Sbjct: 136 QLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIYGIEGQ 195

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y   + +
Sbjct: 196 TVESFMRSLNTALTYRPNELFIYPLYVRPGTRI--------DVRSTDDIGYAIYKSAREL 247

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI------- 295
               G      S   F+  E+      +  GD + +  GA  R  +G+   A        
Sbjct: 248 LVGQGFVQ--TSMRRFVRRETTETE--FSCGDEVMLSCGAGGRSYLGNLHYATPYAVRQQ 303

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +I    + +++    +         LS+E+    F++  L    G+ + ++E   G   D
Sbjct: 304 AIADEIDHYIRT--TDFMTAANGFLLSTEEMQIRFIIKNLMYHRGVDLAEYEKRFGEKPD 361

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               R    +G+IE      +R T+ GM   D +     
Sbjct: 362 RNLFREFTDRGWIEET-GRIVRLTEEGMAYSDYIGQAFI 399


>gi|170739276|ref|YP_001767931.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
 gi|168193550|gb|ACA15497.1| oxygen-independent coproporphyrinogen III oxidase [Methylobacterium
           sp. 4-46]
          Length = 490

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/403 (16%), Positives = 146/403 (36%), Gaps = 33/403 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             + +Y+H PFC + C YC  ++ V   +   E+++ +   E+  + +    R +  ++ 
Sbjct: 76  EPVSLYLHVPFCDQLCWYCGCHTSVVHRRGPIEDYVATLTREIGLVAEALPARLAAGAVH 135

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGGTP+L+ P ++A +++ + +++T+S +     E +P  +           G+NR SL
Sbjct: 136 FGGGTPNLLAPGDLAAVVEALRRHFTLSPDTAFAAELDPRLLTEAWITTACGLGLNRASL 195

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ L+ Q    + R    S    ++   R      ++ DL+Y LP QT       + + 
Sbjct: 196 GVQDLDPQVQAAINRRQPFSMVAWSVEHLRRAGVGSINLDLMYGLPHQTTKGLLSTIDQV 255

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +   + ++L+        +        D  LP     ++      +     G     + 
Sbjct: 256 AALRPERIALFGYAHVP-WMKPAQRLIPDHALPGPVGRLEQQREAAARLQDLGYVRIGLD 314

Query: 255 NHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + ++         A      N+  Y +      IG G  A S +  G  +    +     
Sbjct: 315 HFAWPDDALAEVAAAGRLRRNFQGYTEDAAETVIGFGASAISHLPAGYAQNHAGVP---- 370

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI------ 356
           +W + +            + +  +    ++  L     + ++    L   ++        
Sbjct: 371 AWRERILAGDLPTARGLAVGAADRLRGAVIERLMCDFAVDLRRLCALHDTSVPALVSGTM 430

Query: 357 -ECERNLQRQGFIE-------RVQFSRLRCTQRGMTMLDSVIA 391
                   R G +              +  T+ G + +  V A
Sbjct: 431 RARLEEFARDGLVRLFASGTGPDSLDGIAVTETGRSFVRGVCA 473


>gi|302383200|ref|YP_003819023.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193828|gb|ADL01400.1| oxygen-independent coproporphyrinogen III oxidase [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 464

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 74/399 (18%), Positives = 140/399 (35%), Gaps = 27/399 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISS 73
            + +  +YVH PFC   C YC  N+         ++++   + E +  +   G R  +S 
Sbjct: 58  AAEAASLYVHIPFCRTLCWYCACNTRAVNRAETIKSYVDLLIDEARLAQAALGRRQRVSR 117

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +  GGGTP+++   ++  +  G+ + +      EI  E +PSS+     +   + G+NR 
Sbjct: 118 LHLGGGTPNMVAVDDLDRLFAGLRQAFAFGPEAEIAAELDPSSLTRTWVRAAARNGLNRA 177

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ L  +    + R    +    A     +     ++ DL+Y LP QT       L 
Sbjct: 178 SLGVQDLSPRVQHAINRFEPFATVARAADWLWDAGVGSLNLDLMYGLPLQTRDDLLTTLD 237

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  +     ++L+          +      +  LP  +          +  +  G  A  
Sbjct: 238 QVTTLRPARIALFGYAHVPWLKPH-QRLINEADLPGPDERFAQSQAAAAYLTDAGYQAIG 296

Query: 253 ISNHSFL------GAE--SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEK 299
           + + +         A    LH  N+  Y        IG+G  +  R   G  +   ++E+
Sbjct: 297 LDHFALPEDSLAIAARTGCLHR-NFQGYTTDDAATLIGLGASSVGRTPQGYVQNH-AVER 354

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---- 355
               W   V      V     L+ + +    ++  L     + + + E   G   D    
Sbjct: 355 D---WRAAVAGGRLPVARGLALTPDDRRRAEVIERLMCDFSVRLPEIEQAHGPAPDRFAA 411

Query: 356 -IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +     L   G +       +  T  G   +  V    
Sbjct: 412 ALARLAPLVEDGLVVCAD-GLVSVTDLGRPFVRLVCGAF 449


>gi|167005234|ref|ZP_02270992.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 361

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 141/333 (42%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + Q+   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFQALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I A+  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +   +    YEISN 
Sbjct: 180 ALITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELNFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|269120254|ref|YP_003308431.1| coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
 gi|268614132|gb|ACZ08500.1| Coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
          Length = 443

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 85/393 (21%), Positives = 176/393 (44%), Gaps = 23/393 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------ 66
            +  +++ +Y+H PFC  KC YC+  S         E+++   + E++   +        
Sbjct: 40  NKDKSNISLYIHIPFCTNKCGYCNLMSTTCFSAGRLEHYVNKLIEEIKSYGETGILGAGN 99

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGY 125
                SS+  GGGTP++++   +  +L  + +   +   N   ++E +P ++    F   
Sbjct: 100 NKAEFSSVILGGGTPTVLDTGLMEKLLMSLEQYLDIDFENTFFSMETSPKTLSNEYFLLL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM---SFDLIYALPKQ 182
           +K  +NR+S+GVQS  +  L+ + RN       +A+ +  +    +   + DLIY LP Q
Sbjct: 160 KKYYLNRLSIGVQSFFDNELKAIYRNELKQNIDSALKILFSSENSIEIRNLDLIYGLPGQ 219

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           TM  WE  L R +S+  + + +Y L + + T  ++ +K         ++   +Y+    I
Sbjct: 220 TMKSWEESLCRVISHKPEEIFIYPLYVREKTRLFENYKADH------DLMGKMYDNAVRI 273

Query: 243 TSAHGLHAYEISNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KH 300
            S +G     + N    G  + L+     +    +GIG GA S +    +    ++E K+
Sbjct: 274 LSENGYIQTSMRNFISEGMKDKLYPDYSCQENKMLGIGCGARSYIGNVHYSRKYAVEDKN 333

Query: 301 PESWL-KMVRKNGHAVVEKEF-LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
             S +   +++   A  E  + LS E+Q  ++++  +    G + +D+          E 
Sbjct: 334 INSIIDDYLKEENFAFAEYGYKLSEEEQKIKYILKSILKITGFNTEDYREKFHTEPLEEF 393

Query: 359 --ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                L  +G++ R + +R+  + +G+   D +
Sbjct: 394 SELEKLINEGYLIR-EGNRIFPSAKGLKYSDYI 425


>gi|210623797|ref|ZP_03294057.1| hypothetical protein CLOHIR_02008 [Clostridium hiranonis DSM 13275]
 gi|210153379|gb|EEA84385.1| hypothetical protein CLOHIR_02008 [Clostridium hiranonis DSM 13275]
          Length = 522

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 65/316 (20%), Positives = 137/316 (43%), Gaps = 20/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SI 71
               + +YV  PFC  +C YC F S+ +++Y   +  +++  L E +   ++   R   I
Sbjct: 193 SDKKISLYVSIPFCPTRCYYCSFPSNSIQKYGNLRRKYVERLLDEARGTAEIIKNRGWKI 252

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            + + GGGTP+ ++ +++  +++ + + +  S   E T+EA  P ++     +  +K GV
Sbjct: 253 ETFYIGGGTPTALDAEDMDYMIENLFEIFDFSKIKEFTVEAGRPDTITEEKLRVLKKHGV 312

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           NRIS+  Q++ + +L  +GR H+  +      +AR   F  ++ D+I  L  +     + 
Sbjct: 313 NRISINPQTMNDSTLEKIGRKHSVEDIKTCFKMARELGFDNINMDIILGLVDEDAEMVKN 372

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + + L+++ L I++ +            L      + + +++        L+
Sbjct: 373 TLEEIKKLSPESLTVHTLAIKRASKLNMDMDSYKESLTQYKEMIKMIDISMEAAKEMNLN 432

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAHSRVK--VGSHRVA 294
            Y            E   ++  G E ++N+         I IG GA S+      +    
Sbjct: 433 PYYMYRQKMMLGNLENVGYAKEGYECIYNMQMMEEKQTNIAIGAGAVSKFVYLDENRIER 492

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E +L  V  
Sbjct: 493 VDDVKNLEIYLDRVED 508


>gi|168232936|ref|ZP_02657994.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194468765|ref|ZP_03074749.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455129|gb|EDX43968.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205332824|gb|EDZ19588.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 413

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHGYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        +QG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIQQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NSSRLRLTETGMALSDCL 396


>gi|223938330|ref|ZP_03630225.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
 gi|223893044|gb|EEF59510.1| Coproporphyrinogen dehydrogenase [bacterium Ellin514]
          Length = 444

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 89/386 (23%), Positives = 165/386 (42%), Gaps = 17/386 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Q  N+L +YVH PFC  +C +C+  +     +   + ++ +   +   +R      + + 
Sbjct: 47  QQCNALFLYVHVPFCEMRCGFCNLFTTTNPNQTLIDGYLAALQRQASVVRDALHNPAFAR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNR 132
           + FGGGTP+ +EP  + ++   + +     S  +  ++E +P++            GV+R
Sbjct: 107 LAFGGGTPTFLEPAELEILFAVVEEIMGADSRSLPFSVETSPATATCERLNLLHDHGVDR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           IS+G+QS  E  +  +GR+    E   A+   R++ FP ++ DLIY LP QTM  W   L
Sbjct: 167 ISIGIQSFLEHEVAAVGRSQKRQEVETALQNIRSLNFPTLNIDLIYGLPGQTMDSWMESL 226

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             AL Y  + L LY L +   T   +  +  +      ++ + +Y   +S   A+G    
Sbjct: 227 SSALQYRPEELFLYPLYVRPLTGLGRKDRHWE------DLRLQMYREARSRLLANGYTQI 280

Query: 252 EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPESWL 305
            +       A +     Y    D  IG+G GA S  +   + +     +I++    +S+ 
Sbjct: 281 SMRMFRAEHAPTAEGPAYCAQEDGMIGLGCGARSYTRNLHYAMPYAVDSINVRNLIQSFN 340

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
           +              L   +Q   ++   L L  G+ +  ++   G ++  +      L+
Sbjct: 341 QTTEDQFAHADYGFILDDSEQKRRYVAQTLLLASGLPLDFYQKRFGTSVFEDLPELCELE 400

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSV 389
             GF  R +   LR T  GM   D +
Sbjct: 401 VLGFAVR-ESQLLRLTTEGMERSDVI 425


>gi|315058435|gb|ADT72764.1| Coproporphyrinogen III oxidase, oxygen-independent [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 451

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 153/397 (38%), Gaps = 29/397 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            + FGGGTP+    + +  ++  I       S + EI+ E +P  +         +   N
Sbjct: 101 QMHFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEKQAIVLTQNSFN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEME 190
           RIS GVQ  +E+  + + R         A++L        ++ DLIY LP Q +  +   
Sbjct: 161 RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQT 220

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +    D L+++        L   M K  +  LPS +V +++    ++  S +G   
Sbjct: 221 LEKVMLLNPDRLAIFNYAHVP-WLKKNMRKFDENTLPSPDVKLEILEFCENFLSKNGYKM 279

Query: 251 YEISNHSFLGAE---SLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
             + + +    E   +L N     N+  Y      D +G+G  +         R      
Sbjct: 280 IGMDHFAKEDDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIG----EGQRHYAQNF 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           K   S+   + +          LS + +  + ++M L     + +K  E     +     
Sbjct: 336 KDMSSYEAALDRGVLPFERGVVLSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYF 395

Query: 359 ERNLQRQGFIER------VQFSRLRCTQRGMTMLDSV 389
           + +L+    +E          + ++  + G+ ++ ++
Sbjct: 396 KEDLRA---LEEYKDFINFDENFIKVNETGVLLIRNI 429


>gi|283954140|ref|ZP_06371665.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283794419|gb|EFC33163.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 355

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 146/346 (42%), Gaps = 26/346 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++ +  +        I ++F GGG
Sbjct: 4   YIHIPFCESKCHYCAFTS--LKKNDYEKAYFKALKEDIAFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I + +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDVYNYEDIFEILGPL--LDKNVEISCEANPNSATLNWLKTMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L+FLGR HN    I  +  A    F  ++ DLIY     +    E EL       
Sbjct: 120 FHPKKLQFLGRIHNKEMIIKTLENANKVGFKNINIDLIYDTKLDSKKMLEFELLHLKKIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +    G   YEISN 
Sbjct: 180 TLITHLSAYNLTIESNTAFAKKEHLKK------NAPNLMKFFIKQLLEL-GFFQYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A ++  + ++            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLNDYIKN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
              E LSS+    E L +GLR   GI            +DI  +  
Sbjct: 284 RTIEELSSKDLNLEHLFLGLRSIIGIDEARLNQWQKEKIDILLKEK 329


>gi|331655124|ref|ZP_08356123.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
 gi|331047139|gb|EGI19217.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
          Length = 445

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 91/402 (22%), Positives = 156/402 (38%), Gaps = 41/402 (10%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTG 67
           N T      L VY+H PFC   C +C F  + R  +    ++  + + E++      L  
Sbjct: 50  NQTASPRKRL-VYLHIPFCATHCTFCGFYQN-RFDEDACAHYTDALIREIEMEADSVLHQ 107

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I +++FGGGTPS +   ++A I+  + +   ++ + EITIE    + +     G   
Sbjct: 108 SAPIHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDGCLD 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
           AG NR S+G+QS   +  + + R  +   AIA +  L +     +  DL++ LP Q    
Sbjct: 168 AGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQT 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  +L  A    +D + LY L +   T   K  ++G   +PS     DLY          
Sbjct: 228 WGEDLAIARDIGLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDEA 287

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G      S+      E +L+NL   +  D +  G GA   +       +   E++ ++W 
Sbjct: 288 GWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWH 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAG 351
           + V                      LMM +R           L+ G+        E+   
Sbjct: 344 ESVAAGKKP----------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPH 387

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       ++G   R   + LR T  G     +++ +L
Sbjct: 388 AEKLAPLLAQWHQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|281180540|dbj|BAI56870.1| putative coproporphyrinogen oxidase [Escherichia coli SE15]
          Length = 445

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|331649321|ref|ZP_08350407.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
 gi|331041819|gb|EGI13963.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
          Length = 445

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|86151828|ref|ZP_01070042.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153303|ref|ZP_01071507.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613561|ref|YP_001000281.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315124100|ref|YP_004066104.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|85841457|gb|EAQ58705.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85843029|gb|EAQ60240.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87250516|gb|EAQ73474.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315017822|gb|ADT65915.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 355

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 141/333 (42%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + Q+   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFQALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I A+  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +   +    YEISN 
Sbjct: 180 ALITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELNFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|330909553|gb|EGH38067.1| radical SAM family protein HutW [Escherichia coli AA86]
          Length = 419

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 326

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 327 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 373 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 402


>gi|218691787|ref|YP_002399999.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|218429351|emb|CAR10315.2| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli ED1a]
          Length = 445

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|300940154|ref|ZP_07154761.1| radical SAM domain protein [Escherichia coli MS 21-1]
 gi|300455015|gb|EFK18508.1| radical SAM domain protein [Escherichia coli MS 21-1]
          Length = 445

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|317504515|ref|ZP_07962491.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           salivae DSM 15606]
 gi|315664376|gb|EFV04067.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           salivae DSM 15606]
          Length = 460

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 86/416 (20%), Positives = 150/416 (36%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YL A E +      N +  Y+H PFC   C YC  NS           + ++   E+  
Sbjct: 38  DYLKAVETSNDATADN-ISFYIHMPFCRHLCHYCGCNSVAMAKPDRITEYFETLHKEIDL 96

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+PS +    I  I + +   +      EI IE +P  ++  
Sbjct: 97  LLPHLRKDRRISQIHYGGGSPSSMPLHFIRSINEHLLSAFETIDRPEIAIECHPGYLKEE 156

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++     +G NR SLG+Q   ++ LR + R          + + R    +++FD IY LP
Sbjct: 157 DWNYLLDSGFNRFSLGIQDFNDEVLRCVNRQPALLPVETIMKILREGGAKVNFDFIYGLP 216

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQ+++ +   +++A+S   D L  +       +LF +        LPS+N  + ++    
Sbjct: 217 KQSVSAFVSTIKKAISLRPDRLVTFSYAHLP-SLFKRQMILEKAGLPSQNEKLKMFEEAS 275

Query: 241 SITSAHGLHAYEISNHSFLG--------AESLHNLNYWRY------GDYIGIGPGAHSRV 286
                 G     + +               SLH  N+  Y            G    S++
Sbjct: 276 KTLQVAGYVPIGMDHFVLPDDDLSVALQHHSLHR-NFQGYCPRRITAQVYAFGVSGISQL 334

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +      K    ++  V      +     L   Q+    ++  +     I+ +D 
Sbjct: 335 DEAYAQNT----KDISEYVSRVNAGQMPIHRGYALVEWQRITREVIECIMCNNSINWRDM 390

Query: 347 EMLAGRNL---------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                 ++         D +    LQ  G I       L     GM  + +V A  
Sbjct: 391 ATRLQCSVETIKQAIHYDEQQLTTLQDDGLIV-FDDESLHVLPEGMPFVRNVAAAF 445


>gi|320193986|gb|EFW68619.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327]
          Length = 419

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 326

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 327 --------------LMMIMRNAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLAQW 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 373 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 402


>gi|56415858|ref|YP_152933.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364787|ref|YP_002144424.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56130115|gb|AAV79621.1| hypothetical protein SPA3853 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096264|emb|CAR61863.1| hypothetical protein SSPA3583 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 413

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 151/378 (39%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRASIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HN + A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNTASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFTSDALRDFPDLERFIRQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|162147071|ref|YP_001601532.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209544132|ref|YP_002276361.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785648|emb|CAP55219.1| putative Oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531809|gb|ACI51746.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 454

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 88/415 (21%), Positives = 158/415 (38%), Gaps = 42/415 (10%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
            A+   M       L +Y+H PFC   C +C  N+ V R   G+  +    + E++ +  
Sbjct: 36  EAWLRAMA--PGTPLSLYLHVPFCDALCLFCGCNTSVMRDPAGRTAYGALLMDELRRVAG 93

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +L     +  + +GGGTP+ + P+ +   +  I + +T+  + EI IE +P  +      
Sbjct: 94  RLGPDHPVRHVQWGGGTPTTLPPETMRAAMQTIRRLFTIERDAEIAIELDPRHMPDAYPD 153

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
             R  G NR+SLGVQ L+       GR  + ++    +   R      ++ DLIY LP Q
Sbjct: 154 LLRTLGFNRVSLGVQDLDPAVQTACGRIQSRAQTEDCVRRVRAAGIASVNVDLIYGLPYQ 213

Query: 183 TMTQWEMELQR-ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           T+          A +   D L+++           +     + VLP     +       +
Sbjct: 214 TVDGAGETAATVAAALRPDRLAVFGYAHVP-WKQKRQALLPESVLPGPAERLAQRARIDA 272

Query: 242 ITSAHGLHAYEISNHSFLG------AE-SLHNLNYWRYG-D----YIGIGPGAHSRVKVG 289
           +  A G  A  + +++  G      AE      N+  Y  D     IGIG  A S    G
Sbjct: 273 VLRAAGYRAIGLDHYARPGDALTLAAEGGTMRRNFQGYTVDPAPVLIGIGASAISSYPQG 332

Query: 290 SHRVAISIEKHPESWLKMVRKN--GHAVVEKEFLSSEQQAD----EFLMMGLRL------ 337
             + A++      ++ +++ +      VV     + + +      E LM  LR+      
Sbjct: 333 MTQNALTA----AAYARLMGQGTDTLPVVRGVRRTDDDRLRGAVIERLMCDLRVDPAAIG 388

Query: 338 -REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
              G+    +         +         G I  +  + +R T  G   L ++ A
Sbjct: 389 AHHGVPATWFAD------AMPGLHQAAADG-IVTLDGAMIRMTDAGRPFLRNIAA 436


>gi|328544832|ref|YP_004304941.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [polymorphum
           gilvum SL003B-26A1]
 gi|326414574|gb|ADZ71637.1| Oxygen-independent coproporphyrinogen III oxidase
           (Coproporphyrinogenase) (Coprogen oxidase) [Polymorphum
           gilvum SL003B-26A1]
          Length = 454

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 86/405 (21%), Positives = 156/405 (38%), Gaps = 38/405 (9%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + Y + +      + L +Y+H PFC + C YC  ++   R       + ++   E++ + 
Sbjct: 32  ALYADWLRACPPETELSLYLHVPFCREICHYCGCHTKATRKDAPLIAYAKTLGREIELVA 91

Query: 64  QLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G  R +S I +GGGTPSL+  +++  +   +  ++ +S ++E  IE +P  V     
Sbjct: 92  EKLGSARPVSHIHWGGGTPSLLPQESLLELAGLLRVSFALSPDLEHAIELDPRLVSPGLA 151

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPK 181
                 GVNR SLGVQ ++    R +GR     + + A    RN     ++FDL+Y LP 
Sbjct: 152 ATLAAIGVNRASLGVQDMDPVVQRAIGRVQPYDDVVRATDALRNAGITALNFDLMYGLPH 211

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT       + R L  A   ++L+        +        +  LPS  + ++L  + +S
Sbjct: 212 QTSATILDTVARTLELAPSRIALFGYAHVP-WMKKHQRLIDEAALPSPQLRLELAEIARS 270

Query: 242 ITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
                G  A  + + +           E     N+  Y        IG+G  +   +  G
Sbjct: 271 ALLEAGYEAIGLDHFALSDDSMAIAQREGRLRRNFQGYTTDTATALIGLGVSSIGLLHQG 330

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFL----SSEQQADEFLMM-------GLRLR 338
             + A  +     +W + +      +V    +     +     E LM         +   
Sbjct: 331 YVQNASDV----GAWERAIEAGRLPIVRGIAMDDDDRARADIIERLMTDYEADVAAIATA 386

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
            G+ V  ++        I    +L   G    V   R+R T  G 
Sbjct: 387 HGMQVSAFDE------SIAKLDDLVVDGL-ALVDGYRVRLTDAGR 424


>gi|239945653|ref|ZP_04697590.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|239992122|ref|ZP_04712786.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           11379]
          Length = 460

 Score =  222 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 81/410 (19%), Positives = 162/410 (39%), Gaps = 21/410 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A  +    +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+ 
Sbjct: 37  ALRSLWAAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTARYLDALDRQALAVREA 96

Query: 66  TG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNN 121
            G   P   ++  FGGGTP+ +    +  + D   K      S V +++E +PS+   + 
Sbjct: 97  LGDEEPVRFAAAAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPSTATADR 156

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                  G  R+S+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY + 
Sbjct: 157 LAVLADRGTTRVSIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNVDLIYGID 216

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP------SENVAVD 234
            QT   W   L  AL++  + L LY L +   T  +++    D           +   + 
Sbjct: 217 GQTERSWLASLDAALAWRPEELYLYPLYVRPLTGLHRLGAAADAEAQALEDTAWDEQRLR 276

Query: 235 LYNLTQSITSAHGLHAYEISNHSF--LGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSH 291
           LY + +    AHG     +          E     +Y    D  IG+G GA S      +
Sbjct: 277 LYAVGRDHLLAHGYEQVSMRMFRRSDAPREQEGPEDYACQTDGMIGLGCGARSYTSALHY 336

Query: 292 RVAISIE-KHPESWLKM--VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
               +++ +   S +      ++        ++  ++     L+  L    G+ V ++  
Sbjct: 337 SFDYAVDMREIRSIIDRFTTTEDFSRAEVGRYVDVDEARRRHLLQSLLQAAGLPVAEYRA 396

Query: 349 LAGRNLDIECERNL---QRQGFIERVQFSR-LRCTQRGMTMLDSVIANLA 394
             G +   +    L     +G+++       LR +  G+   D++   L 
Sbjct: 397 RFGTDPGADFPAELAGFAARGWLDASAPDGLLRLSPSGLAHSDALGPALF 446


>gi|85707474|ref|ZP_01038553.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
 gi|85668014|gb|EAQ22896.1| coproporphyrinogen III oxidase [Roseovarius sp. 217]
          Length = 451

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 148/381 (38%), Gaps = 23/381 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG 77
           + +YVH PFC + C +C   +   +       ++Q+  TE+  + R L     +S + +G
Sbjct: 51  VSLYVHVPFCRRLCWFCACRTQGTQTDAPVIAYLQTLKTEIAMLGRSLPRGVRLSRLHWG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+L+ P  +  +   I      +   E ++E +P+ ++        +AG+NR S+GV
Sbjct: 111 GGTPTLLSPDLMTELAAAIRDIAPFTDATEFSVEIDPNEIDGARLDALARAGMNRASIGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q  +E   + +GR         A+   R      ++ D++Y LP Q   +    +Q+ LS
Sbjct: 171 QDFDEHIQKSIGRMQGYDITRWAVDEIRARGVKSLNADILYGLPHQNRARITESVQKLLS 230

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            + D ++LY        +  +        LP+    +DL+   + +          I + 
Sbjct: 231 LSPDRVALYGYAHVP-WMAKRQQMIPSDALPTPQERLDLFETARHLFLWDNYVEIGIDHF 289

Query: 257 S------FLGAESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           +       +  +S H   N+  Y D      IG+G  + SR   G  + A +   H    
Sbjct: 290 ATKSDGLSVAQKSGHLRRNFQGYTDDTAEVLIGVGASSISRFPQGYAQNAPATGAHTG-- 347

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
              +R+   +       S+E +    ++  L     I   +           E +  L  
Sbjct: 348 --AIREGRFSTSRGHVFSAEDKLRARMIEMLMCDFRIDSAEIFREFEIP-AAELQVMLSA 404

Query: 365 QGFIERVQFSRLRCTQRGMTM 385
              ++R     L     G+ +
Sbjct: 405 ---VDRRFEGHLTLNATGLAI 422


>gi|282860335|ref|ZP_06269404.1| coproporphyrinogen dehydrogenase [Prevotella bivia JCVIHMP010]
 gi|282586932|gb|EFB92168.1| coproporphyrinogen dehydrogenase [Prevotella bivia JCVIHMP010]
          Length = 454

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 76/414 (18%), Positives = 161/414 (38%), Gaps = 30/414 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+ A   +     +++L  Y H PFC + C YC  NS+  + + G + ++ +   E+  +
Sbjct: 33  YIEALHES-NFSYTSNLSFYFHIPFCRRLCHYCGCNSYPMQKEEGVQTYVDALHKEIDLV 91

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            + L   R IS I +GGG+P+ +    +  + + +  ++      EI IE +P  +E  +
Sbjct: 92  VQHLNKSRRISQIHYGGGSPTSLPASVLQELNEHLLTSFPTIEQPEIAIECHPGYLEKKD 151

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           ++    A  NR S+GVQ L+ + L+ + R  +       + + R     ++ D ++ LP 
Sbjct: 152 WENLLAAHFNRFSIGVQDLDTEVLKIVNRTPSKLPLTVIMQILREGGASINMDFLFGLPH 211

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   ++  + +A+    D L+ +        +F +        LP+      ++   + 
Sbjct: 212 QTPESFQNTIHKAIELYPDRLTTFSYG-HCPWIFKRQMILERAGLPTSESKSLMFKKAEE 270

Query: 242 ITSAHGLHAYEISNHSFLGAE-----SLH--NLNYWRY------GDYIGIGPGAHSRVKV 288
           +    G     + +      E     + H  + N+  Y      G     G    S+++ 
Sbjct: 271 VLLEAGYKEIGLDHFVLPTDELAMALNTHQLHRNFQGYCTRRTTGQVYAFGVTGISQLET 330

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL---------RE 339
              +   SI    + ++  +  N   + +   LS +Q+    ++  L             
Sbjct: 331 AYAQGTKSI----DEYISTLANNHLPISKGYLLSPQQKIVRAVIEQLMCNYHIEWDIIAR 386

Query: 340 GISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +++    ++   N   +    +Q  G I     S    T      + +V A L
Sbjct: 387 ELNISKEALMRSINFQKDILDEMQNDGLITLSDASLTVLTSA-RPFVRNVAATL 439


>gi|26250136|ref|NP_756176.1| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|26110565|gb|AAN82750.1|AE016768_168 Putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli CFT073]
          Length = 445

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 84/378 (22%), Positives = 152/378 (40%), Gaps = 14/378 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R       ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLPNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V      ++
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKPLM 354

Query: 317 EKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
                +    Q    L  G+     + + +    A +           ++G   R   + 
Sbjct: 355 MIMRNAERNAQWRHTLQSGIETAC-VPLDELTPHAEK--LAPLLAQWHQKGL-SRDASTC 410

Query: 376 LRCTQRGMTMLDSVIANL 393
           LR T  G     +++ +L
Sbjct: 411 LRLTNEGRFWASNILQSL 428


>gi|320007246|gb|ADW02096.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 475

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 84/420 (20%), Positives = 155/420 (36%), Gaps = 37/420 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---P 68
             +  ++L +Y+H PFC  +C +C+  + +         ++ +   +   +R   G   P
Sbjct: 42  ATERKDALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDDAP 101

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRK 127
              +S  FGGGTP+ +    +  + D   K      S V +++E +PS+   +       
Sbjct: 102 VRFTSAAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPSTATADRLAVLAD 161

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQ 186
            G  R+S+GVQS  +   R   R  + SE  AA+   R     + + DLIY +  QT   
Sbjct: 162 RGTTRVSIGVQSFVDAEARAAVRPQHRSEVEAALGRIREAGIPVLNIDLIYGIEGQTEDT 221

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM----HKDGDLVLPSENVAVDLYNLTQSI 242
           W   L  AL+++ + L LY L +   T   ++     + G      ++  + LY   +  
Sbjct: 222 WRTSLDAALAWSPEELYLYPLYVRPLTGLGRLGAAAQEAGGPDAAWDDQRLRLYRAGRDH 281

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIE-KH 300
             AHG     +       A      +Y    D  IG+G GA S      +    ++E + 
Sbjct: 282 LLAHGYEQVSMRMFRRADAPPAGPDDYACQTDGMIGLGCGARSYTSSLHYSFDYAVEMRE 341

Query: 301 PESWLK--MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
               +       +        ++  E+     L+  L   EG+   ++    G +   + 
Sbjct: 342 IRGIIDGFTTTTDFSRAEVGRYVDGEEARRRHLLQSLLQAEGMRSAEYRERFGSDPYEDF 401

Query: 359 ERNLQR---QGFIERVQFSR---------------------LRCTQRGMTMLDSVIANLA 394
              L+R   +G++                            LR    G+   D++   L 
Sbjct: 402 PAELERFAARGWLADPADGGSPSARSASGRSPAGGPAASGLLRLAPEGLAHSDALGPELF 461


>gi|284925841|gb|ADC28193.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 355

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 139/333 (41%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS GVQS
Sbjct: 62  TPSCVNAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I  +  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 DLITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|315638270|ref|ZP_07893451.1| putative coproporphyrinogen dehydrogenase [Campylobacter
           upsaliensis JV21]
 gi|315481617|gb|EFU72240.1| putative coproporphyrinogen dehydrogenase [Campylobacter
           upsaliensis JV21]
          Length = 373

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 93/330 (28%), Positives = 150/330 (45%), Gaps = 26/330 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGG 79
           Y+H PFC  KC YC F S   + K  +E +  + + ++++          SI ++F GGG
Sbjct: 24  YIHIPFCESKCHYCSFTS--LKKKDYEEAYFNALIKDIKFQISQFNLSKNSIKTLFIGGG 81

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS++E +    +   +     +    EI+ EANP+S   N  +  ++ G+NR+S G QS
Sbjct: 82  TPSVVEAKYYEKLFQVLMPF--LKEKAEISCEANPNSSNFNWLKAMKELGINRLSFGAQS 139

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +E+ L+FLGR+H+    + ++ +A+   F  ++ DLIY     T    E EL       
Sbjct: 140 FDEKKLKFLGRSHSQKAILKSLEVAKKAGFNNVNLDLIYDTKLDTKKMLEFELLHLEKIK 199

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             ++HLS Y L+IE+ T F K+             A +L           G   YEISN 
Sbjct: 200 IFINHLSAYHLSIEENTAFSKLFHYKK-------NAPNLMRFFIKGIENLGFKQYEISNF 252

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S       HNL+YW+  +Y+G G  +    +        +++ + +              
Sbjct: 253 SK-NKPCRHNLSYWQGKNYLGAGLSSVGFYEDQRFYTYQNLQDYIK---------EPCFR 302

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           + E LS      E L +GLR   G+  KD 
Sbjct: 303 KIEKLSFNDLNLERLFLGLRSVVGVKEKDL 332


>gi|282878047|ref|ZP_06286855.1| coproporphyrinogen dehydrogenase [Prevotella buccalis ATCC 35310]
 gi|281299882|gb|EFA92243.1| coproporphyrinogen dehydrogenase [Prevotella buccalis ATCC 35310]
          Length = 456

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 81/417 (19%), Positives = 158/417 (37%), Gaps = 32/417 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL+A + +        +  Y+H PFC   C YC  NS+     V   +++ +   E+  
Sbjct: 32  EYLAAVDASNHQTRQPLVSFYLHIPFCRHLCHYCGCNSYPMADDVVIGHYVDALHREIDL 91

Query: 62  MRQL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +     T  R IS I +GGG+P+ +    +  + + +        N EI IE +P  +  
Sbjct: 92  VAARIDTATRKISQIHYGGGSPTALPIHYLQELNEHLLSLMPAIENPEIAIECHPGYLTA 151

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
           +N++   + G  R SLGVQ  + + L+ + R          + L R     ++ DL++ L
Sbjct: 152 SNWEELGRCGFTRYSLGVQDFDLRVLKAVNRRPPLMPISEIMELLRAQGATINMDLLFGL 211

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +    Q+A +   D +  +        +  +      L LP +    ++Y   
Sbjct: 212 PLQTPESFAQAAQQAAALHPDRVVTFSYGHVP-WVHKRQLVLEKLGLPKDADKQEMYRKA 270

Query: 240 QSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSR 285
             +  A G  +  + +      E         LH  N+  Y      G     G  A S+
Sbjct: 271 ADVFHAAGYRSIGMDHFVLPTDELSIALDTRQLHR-NFQGYCTRRTTGQVYAFGVTAISQ 329

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           ++    +      +  ++++  +R+          L+ ++Q    ++  +     +S  +
Sbjct: 330 LETAYAQNG----RDIQAYIDTIRQGKLYTRRGYQLTRQEQIVREVIAQMMCNYHLSWSE 385

Query: 346 WEMLAGR---------NLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                G          N D    R ++  G I  +    +  T  G   + +V+A L
Sbjct: 386 IAGRIGITPAEVKAATNYDEAKLREMEADGLI-LLSDDVVAMTSIGSPFVRNVVATL 441


>gi|213580535|ref|ZP_03362361.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 367

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 79/353 (22%), Positives = 152/353 (43%), Gaps = 25/353 (7%)

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            E++    L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  
Sbjct: 1   QEIRHRAPLFADRHVSQLHWGGGTPTYLNKAQISRLMTLLRENFHFNTDAEISIEVDPRE 60

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +E++     R  G NR+S+GVQ   ++  R + R  +     A ++ AR+I F   + DL
Sbjct: 61  IELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARDIGFTSTNIDL 120

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           IY LPKQT   +   L+R      D LS++       TLF    K  D  LPS    +D+
Sbjct: 121 IYGLPKQTPESFAFTLKRVTELNPDRLSVFNYAHLP-TLFAAQRKIKDADLPSAQQKLDI 179

Query: 236 YNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAH 283
              T    +  G     + + +           E + + N+  Y      D +G+G  A 
Sbjct: 180 LQETIVSLTQAGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAI 239

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
           S +  G     +  +K  + + + V + G+A+     L+ +      ++  L     +  
Sbjct: 240 SMIGDG----YMQNQKELKRYYQQVDERGNALWRGITLTRDDCIRRDVIKALICNFRLDF 295

Query: 344 KDWEMLAGRNLDIECERNLQ------RQGFIERVQFSRLRCTQRGMTMLDSVI 390
              E   G +       +LQ      + G ++  +   ++ T +G  ++ ++ 
Sbjct: 296 NAVEQQWGLHFAEYFAEDLQLLSPLAKDGLVDISEKG-IQVTAKGRLLIRNIC 347


>gi|13926030|gb|AAK49511.1|AF321091_1 oxygen-independent coproporphyrinogen III dehydrogenase
           [Pseudomonas putida]
          Length = 461

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 77/402 (19%), Positives = 154/402 (38%), Gaps = 29/402 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
           + +    L +YVH PFC   C YC  N  + + +   + ++Q    E+Q +   L   ++
Sbjct: 47  SRKAQRPLSLYVHVPFCANICYYCACNKVITKDRGRAQPYLQRLEQEIQLIACHLDPAQT 106

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  + FGGGTP+ +    +  ++  + K++ +    + +  IE +P   + +     R+ 
Sbjct: 107 VEQLHFGGGTPTFLSHDELRQLMAHLRKHFNLLNDDSGDYGIEIDPREADWSTMGLLREL 166

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQ 186
           G NR+S  +Q L+              +   A+  A     F  ++ DLIY LPKQT   
Sbjct: 167 GFNRVSKNLQDLDPAGASVRSIACKVWKKPRAVIDAARTLQFRSINIDLIYGLPKQTPDN 226

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  ++  +S   D LS++         F    +   L LPS    +++   T    +A 
Sbjct: 227 FDRTVEEVISLQPDRLSVFNYAHLPE-RFMPQRRINSLDLPSPAHKLEMLQRTIEQLTAA 285

Query: 247 GLHAYEISNHSFLG-----AESLHNL--NYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
           G     + + +        A+  H L  N+  Y      D IG+G  A S++      + 
Sbjct: 286 GYRYIGMDHFALPDDELAIAQEEHTLQRNFQGYTTHGHCDLIGLGVSAISQIGD----LY 341

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                   ++   +     A       +++ +    ++  L     +   + E     + 
Sbjct: 342 CQNSSDLTAYQNSLASAQLATSRGLVCNADDRLRRAVIQQLICNFKLEFAEIEQQFNIDF 401

Query: 355 DIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
                      + +   G I R++  R+     G  ++ SV 
Sbjct: 402 QGYFGALWPQLQGMAEDGLI-RLERERIEVLPAGRLLVRSVC 442


>gi|238919809|ref|YP_002933324.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238869378|gb|ACR69089.1| coproporphyrinogen III oxidase-like protein, putative [Edwardsiella
           ictaluri 93-146]
          Length = 460

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 81/373 (21%), Positives = 144/373 (38%), Gaps = 19/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFGG 78
           VYVH PFC   C +C F  + R  +     +      E+     L       I +I+ GG
Sbjct: 56  VYVHIPFCATHCTFCGFYQN-RFSEQAIARYFDYLQREIDLESALPLQQSAPIHAIYLGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  ++  +     ++++ EIT+E    + +         AG NR S+G+Q
Sbjct: 115 GTPSALNAEQLHRLIVQLRSLLPLAADCEITVEGRVLNFDDARIDACLAAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +    + +GR  +   AIA +  LA      +  DL++ LP QT  +W+ +L      
Sbjct: 175 TFDTHLRQRMGRRADRDRAIAFLRALAERDRAAVICDLMFGLPGQTAREWQNDLDIVHDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   +        +         Y          G H    S+ +
Sbjct: 235 PLDGVDLYALNLLPSTPLARAVDSARTRVADAAERQSFYLHAFDELDKRGWHQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +   S+     +++  E++ + +      ++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAFGSGAGGHLDGQSYM----LQRSLEAYYQRLDAADKPLM 350

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQF 373
               LS+      +    L L+ GI      +      D      L +Q     + R+Q 
Sbjct: 351 ---MLSAPAPQHRW---RLTLQGGIETGRLALAT-LPGDPAPLLPLLQQWQSCNLLRLQD 403

Query: 374 SRLRCTQRGMTML 386
             L  T RG    
Sbjct: 404 HCLMLTPRGRFWA 416


>gi|222823673|ref|YP_002575247.1| oxygen-independent coproporphyrinogen III oxidase HemN,
           [Campylobacter lari RM2100]
 gi|222538895|gb|ACM63996.1| oxygen-independent coproporphyrinogen III oxidase HemN, putative
           [Campylobacter lari RM2100]
          Length = 349

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 92/353 (26%), Positives = 152/353 (43%), Gaps = 31/353 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFF 76
           + +Y+H PFC  KC YC F S   + K  +++++ + + ++++          SI ++F 
Sbjct: 1   MHLYIHIPFCESKCFYCSFTS--LKKKDFEKDYLNALMQDIKYQLDFFKLDKNSIKTVFI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPSL++      I   +     +  + E++IEANP+S  ++  +  +  G NRIS G
Sbjct: 59  GGGTPSLMDASFYEKIFIFLQYY--LQKDSEVSIEANPNSSNLSWLKEIKNLGFNRISFG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS  E+ L+FLGR H+      +I  A+   F  ++ DLIY          + E+ +  
Sbjct: 117 AQSFHEKKLQFLGRIHDQKSIFTSIENAKKAGFDIINLDLIYDTKLDDKKMLDYEISKLT 176

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              ++H+S Y LTIE+                +       +              YEISN
Sbjct: 177 LLDINHISAYNLTIEE----KTKFAKKFHFKKNAPRLAKHFIKAIENLG---YKQYEISN 229

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
               G    HNL YW+  DYIG G  A   +K        S++ +  +            
Sbjct: 230 F---GQICKHNLAYWQGKDYIGCGLSAVGFLKNQRFYTKKSLKDYIAN---------PCF 277

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            E E L+ +    E + +GLR   G+     E      L+ E    L ++G +
Sbjct: 278 REIENLNLQDLRLEHIFLGLRSVIGVDETKLE-----PLEKEKAMFLSKKGKL 325


>gi|57238224|ref|YP_178695.1| coproporphyrinogen III oxidase [Campylobacter jejuni RM1221]
 gi|86149898|ref|ZP_01068127.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596900|ref|ZP_01100136.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562231|ref|YP_002344010.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|57167028|gb|AAW35807.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni RM1221]
 gi|85839716|gb|EAQ56976.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190589|gb|EAQ94562.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359937|emb|CAL34726.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|315057994|gb|ADT72323.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 355

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 139/333 (41%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS GVQS
Sbjct: 62  TPSCVNAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I  +  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 DLITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|332886046|gb|EGK06290.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           mossii DSM 22836]
          Length = 455

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 86/384 (22%), Positives = 154/384 (40%), Gaps = 30/384 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSIS 72
           Q    + +Y+H PFC   C YC  NS + + K   + +I++   E++ +  L    R IS
Sbjct: 44  QNPQHISIYIHIPFCYHMCYYCGCNSQLLKDKNVVKEYIETLKKEIRMVLPLLDHSRKIS 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I +GGGTP+      +  I   I   +    N EI IE +P  ++ + +     AG NR
Sbjct: 104 QIHYGGGTPTSQPVSVLKEINRIILSEFECIENPEIAIECHPGYLDEDYWNDLINAGFNR 163

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+G+Q   E+ L+   R  +       IH+ R+    ++ D IY LP QT   +   ++
Sbjct: 164 ISIGIQDFNEEVLKASARKPSRMAIEDIIHILRSKGISVNMDFIYGLPLQTPESFAETIR 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A+S   D +  +        +         + LPS +   ++Y   + +    G     
Sbjct: 224 KAISLKPDRIVTFSYAHVP-WVNELQKNLEKVGLPSVSTKNEIYETAKKLLIDAGYKTIG 282

Query: 253 ISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRVKVGSHRVAISIE 298
           + +      E        SLH  N+  Y      G     G    S++     + A    
Sbjct: 283 LDHFVLANDELYEALQTKSLHR-NFQGYCTRRTTGQVYAFGNTGISQLSTAYSQNA---- 337

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---------EML 349
           K   +++  V ++ + + +   L+ E+Q    ++  L     +S  D          E+ 
Sbjct: 338 KDLNTYMSSVNESKYPITKGYILNKEEQITREVIASLMCNYTVSWSDIARRMNISEKEVR 397

Query: 350 AGRNLDIECERNLQRQGFIERVQF 373
              N + E   + Q+ G IE  + 
Sbjct: 398 NALNYNKEQLCDFQKDGIIEFSED 421


>gi|265763265|ref|ZP_06091833.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
 gi|263255873|gb|EEZ27219.1| coproporphyrinogen III oxidase [Bacteroides sp. 2_1_16]
          Length = 426

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 157/399 (39%), Gaps = 26/399 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS Y   + G+ +    +Y H PFC  KC YC+  S           ++ +   + + + 
Sbjct: 32  LSPYLERLEGREA---SLYFHIPFCAHKCGYCNLFSQQCCDAERISLYLHTMRRQAEQLS 88

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
                   +S   GGGTP +++   +  +           S V  ++E +P   + +  +
Sbjct: 89  VAAQGLKFTSFAVGGGTPLILDEGQLEELFCLAELFGVHPSRVFTSVETSPEYTQKSVLR 148

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQ 182
             R  GV R+S+GVQS  E  L+ L R       + A+       FP+ + DLIY +  Q
Sbjct: 149 QLRARGVERLSMGVQSFNETELKKLKRRPGLGTVVGALENIVEAGFPQFNLDLIYGIEGQ 208

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+  +   L  AL+Y  + L +Y L +  GT           V  ++++   +Y   + +
Sbjct: 209 TVESFMRSLNTALTYRPNELFIYPLYVRPGTRI--------DVRSTDDIGYAIYKSAREL 260

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI------- 295
               G      S   F+  E+      +  GD + +  GA  R  +G+   A        
Sbjct: 261 LVGQGFVQ--TSMRRFVRRETTETE--FSCGDEVMLSCGAGGRSYLGNLHYATPYAVRQQ 316

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +I    + +++    +         LS+E+    F++  L    G+ + ++E   G   D
Sbjct: 317 AIADEIDHYIRT--TDFMTAANGFLLSTEEMQIRFIIKNLMYHRGVDLVEYEKRFGEKPD 374

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
               R    +G+IE      +R T+ GM   D +     
Sbjct: 375 RNLFREFTDRGWIEET-GRIVRLTEEGMAYSDYIGQAFI 412


>gi|288942334|ref|YP_003444574.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
 gi|288897706|gb|ADC63542.1| oxygen-independent coproporphyrinogen III oxidase [Allochromatium
           vinosum DSM 180]
          Length = 428

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 83/410 (20%), Positives = 151/410 (36%), Gaps = 34/410 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL   +  +      +L +Y+H PFC  +C YC  ++ V       + ++ +   EM  
Sbjct: 16  QYLDVLDT-LRQAPDGNLALYIHVPFCHVRCLYCACDTTVTHSLEKVDQYLDALEREMDM 74

Query: 62  MRQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + +  G R  I  +  GGGTP+ +    +A +++ +  ++ ++     +IE NP    V 
Sbjct: 75  VTERIGRRRPIQQLHVGGGTPNHLNEPQLARLMEIVESHFELAPESCASIECNPRRASVG 134

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
             +     G  RIS GVQ L     R +GR  + +        AR   F  ++ DL+Y L
Sbjct: 135 QLELIHGLGFERISFGVQDLNLDVQRAIGRVQSLNMVRDVFLTARQTGFESINLDLVYGL 194

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   ++  L + L    D ++ +    +        H      LP+    + L++  
Sbjct: 195 PFQTPRGFQATLDQVLDLGPDRVACFSYAHDPA-RRPHQHAINTAHLPTPAEKLALFHRA 253

Query: 240 QSITSAHGLHA-------------YEISNHSFLGAESLHNLNYWRYGD--YIGIGPGAHS 284
               +  G                YE      L   S   L Y    D   +  GP   +
Sbjct: 254 VRTFTEAGYRWVGLDLFVLEDDELYEAQVDGRLYRNS---LGYTTSADRQVLAFGPSGTA 310

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +     R     E     W   +      V     L    +     ++ L     +   
Sbjct: 311 ELADALIRN----ESDLRVWQMRLNNGQFPVAWGRRLDEADRRRRQALLHLMCNLQLPAS 366

Query: 345 DWEMLAGRNLDIECERNLQR--QGFIERVQFSRLRCTQRGMTMLDSVIAN 392
                +  +LD E E+  ++  QG +E  +   +R T +G  +L  + ++
Sbjct: 367 -----SAADLDHEYEQLCRKAEQGLVEISEEG-IRVTPQGRYILHGLCSD 410


>gi|89056350|ref|YP_511801.1| coproporphyrinogen III oxidase [Jannaschia sp. CCS1]
 gi|88865899|gb|ABD56776.1| oxygen-independent coproporphyrinogen III oxidase [Jannaschia sp.
           CCS1]
          Length = 442

 Score =  222 bits (566), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 78/386 (20%), Positives = 154/386 (39%), Gaps = 24/386 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIF 75
           + + +Y+H PFC + C +C   +          +++ + + E + +   L       S++
Sbjct: 49  SEVSLYIHIPFCQRLCWFCSARTQGAPGGAPVASYVDTLIREARAVGAALPPGVRARSVY 108

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           +GGGTP+++ P +I  +   +     ++++ EIT+E +P+ ++        + G+ R S+
Sbjct: 109 WGGGTPTILSPADITRLSCAVHSAIPLTNDAEITVEVDPTEIDDARMDALAQMGMTRASI 168

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ  + +  + +GR  +     AAI  L       ++  L+Y LPKQ  T      Q  
Sbjct: 169 GVQDFDPEIQKIIGRAQSFEATKAAIDGLRARGVDGLTMGLLYGLPKQRRTSLARLTQLL 228

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+ + D +++         +  +        LP+    + L++    +    G     I 
Sbjct: 229 LTLSPDRVTVQPYAHVPA-IARRQSLIPTADLPTPEGQLALFDAAAGVLRWDGFDPIGID 287

Query: 255 NHSFL-----GAESLHNLN--YWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +        A S  +L   +  Y D      +G+G  A SR+  G  + A        
Sbjct: 288 HFALPSDALSTASSRGDLRRCFQGYTDNPGGVLLGLGASAVSRLPQGYAQNAPGTS---- 343

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW--EMLAGRNLDIECER 360
           ++LK V     A      LS +      ++  +     I +     E L       +   
Sbjct: 344 AYLKAVAAGRFATARGHRLSKDDALRGRMIEMILCDFRIDIAKLLAERLGPVARIEDLLT 403

Query: 361 NLQRQ--GFIERVQFS-RLRCTQRGM 383
           ++ RQ  G I R +   R+R   + M
Sbjct: 404 HMLRQFPGQIARFEGGLRVRANSKAM 429


>gi|294678016|ref|YP_003578631.1| oxygen-independent coproporphyrinogen-III oxidase [Rhodobacter
           capsulatus SB 1003]
 gi|294476836|gb|ADE86224.1| oxygen-independent coproporphyrinogen-III oxidase-2 [Rhodobacter
           capsulatus SB 1003]
          Length = 451

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 66/411 (16%), Positives = 158/411 (38%), Gaps = 30/411 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++++ A           S+ +Y+H PFC + C +C   +   +     + + ++ + E+ 
Sbjct: 39  IEWIEAI------PAGASISLYMHVPFCRRLCWFCACRTQGTQTDAPVKTYAETLIKEVA 92

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            ++  L     +S + +GGGT +L+   ++  I + + +   +  N E ++E +P+ ++ 
Sbjct: 93  MLKSHLAPGVKLSRLHWGGGTATLLPADSMRKIAEAVFEAVPLGENGEFSVEIDPNEIDD 152

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYA 178
                  ++G+NR S+G+Q  +      +GR          + + R+     ++ D++Y 
Sbjct: 153 ERMDALAQSGMNRASVGIQDFDPFIQSVIGREQTFEVTKMVVDMIRDRGINSLNADILYG 212

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP QT  +    +++ LS   D ++ Y        +  +        LP+    ++L++L
Sbjct: 213 LPHQTPQKMTESVEKVLSLKPDRVAFYGYAHVP-WMSRRQSLIPSENLPTPPERLELFHL 271

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRV 286
           ++ + +  G     I + +                 N+  Y D      +G+G  + SR 
Sbjct: 272 SRELFTKAGYDVIGIDHFALPHDGLATALKAGKLRRNFQGYTDDQAEALVGLGASSISRF 331

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +          ++   +R+   +       S E      L+  L         + 
Sbjct: 332 PQGFAQNESPT----GTYTAAIREGKFSTHRGFVFSKEDLMRGRLIEMLMCDFKADKAEL 387

Query: 347 EMLAGRN---LDIECERNLQR-QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               G +   LD E    + + +  +   +   L   ++G  +   +  + 
Sbjct: 388 VSQWGADPAVLDAEFAACVAKFEDMVVVTEAG-LEIPEQGRPLTRMIARHF 437


>gi|315928646|gb|EFV07933.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 355

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 139/333 (41%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS GVQS
Sbjct: 62  TPSCVNAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I  +  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 DLITHLSAYNLTIESNTAFSKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|99082388|ref|YP_614542.1| coproporphyrinogen III oxidase [Ruegeria sp. TM1040]
 gi|99038668|gb|ABF65280.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           TM1040]
          Length = 451

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 76/400 (19%), Positives = 151/400 (37%), Gaps = 28/400 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSIS 72
           +    + +YVH PFC + C +C   +   + +     +I+    E+  + R L     ++
Sbjct: 46  KPGAEISLYVHVPFCRRLCWFCACRTQGTQSESPVRAYIEVLKQELALLARALPEGVRLA 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+L+  + I+ + + I     ++   E ++E +P+ ++         AG+NR
Sbjct: 106 RLHWGGGTPTLLSAEMISDLAEAIFAVTPMAKGGEFSVEIDPNEIDDARLDALAAAGMNR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
            S+GVQ  + Q    +GR         A+ + R      ++ D+++ LP Q   +    +
Sbjct: 166 ASIGVQDFDPQIQETIGRIQPFDLTRDAVDMIRARGITSLNADILFGLPHQNRMRMTESV 225

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q+ LS + D ++LY        +  + +      LPS    + L+   Q +    G    
Sbjct: 226 QKLLSLSPDRVALYGYAHVP-WMARRQNMIPTDSLPSPQTRLQLFETAQRLFQWDGYREI 284

Query: 252 EISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I + +                 N+  Y D      IG+G  + SR   G  + A S   
Sbjct: 285 GIDHFATPHDGLAVAARTGRLRRNFQGYTDDRADVLIGLGASSISRFPQGYAQNAPSTS- 343

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
              ++ K +R    +       S E      ++  L     I+  D       ++  +  
Sbjct: 344 ---AYTKAIRDGQFSTARGHVFSGEDLLRGRMIEALMCDFEIATDDIRAQF--DITQDAL 398

Query: 360 RNLQRQ------GFIERVQFSRLRCTQRGMTMLDSVIANL 393
             + R+        ++      LR    G  +   V  + 
Sbjct: 399 ERMYREASVAFPEMLDVTPSG-LRVRPEGKPLTRMVARHF 437


>gi|255514177|gb|EET90439.1| Coproporphyrinogen dehydrogenase [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 446

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/389 (21%), Positives = 162/389 (41%), Gaps = 18/389 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N + VY+H PFC + C +C +   +   ++ +E ++ +   E++    + G + + S+ 
Sbjct: 51  TNEINVYLHIPFCRQLCTFCGYLKTLNSEELRKE-YVSALKREIEMYAGILGAKKVISLN 109

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            GGGTPSL++P  +  I+D + K     + +  E++IEA P SVE + F  Y+  G+NR+
Sbjct: 110 IGGGTPSLLQPNELGEIIDTLKKANRNMLGTAKEVSIEATPESVEYDKFMEYKALGINRV 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+G++S  +  ++  GR++  + +  AI   + I F  +  DL+  +  QT   +   + 
Sbjct: 170 SIGIESFADSEIKMSGRHNAGNISSDAIKTLKEIRFDNVVCDLMIGIEGQTTKTFSDSVD 229

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ-SITSAHGLHAY 251
             L    D + +Y L +   T+  K   +    L       + Y + +        L + 
Sbjct: 230 TLLDLDPDTVEIYALGVIPSTVIGKRRPE---GLMGNRQKYECYEIARKKFLEKGYLQSC 286

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK---HPESWLKMV 308
                       +     +R    IG+G GA S  +   +R              ++  +
Sbjct: 287 HNRYSKLKDGGYVQEDTIFRGTSLIGMGAGARSYAQNIHYRNPSDSLDGRVAISRYISKI 346

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQ 365
             +G AV    FLS +++   + +  +   E + +  +  L G        E    +   
Sbjct: 347 NSDGLAVETGIFLSEDERMRRYAIGNI---ESLDLYKFGSLFGVKFGVAFPELYTEMLWS 403

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           G         L+ T +G+   D +     
Sbjct: 404 GCAYETSNE-LKLTPKGLLFRDLIARQFF 431


>gi|205354406|ref|YP_002228207.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205274187|emb|CAR39204.1| putative coproporphyrinogen III oxidase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326629537|gb|EGE35880.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 413

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 153/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ + M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGADNTFIDSYIDAIITQGRQMA--LAPAHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+       +      VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVELLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +        ++    F++  L   +G+S+ D++     +   D        RQG+  + 
Sbjct: 320 VINHGYLFPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLELFIRQGYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|170766823|ref|ZP_02901276.1| putative coproporphyrinogen III oxidase [Escherichia albertii
           TW07627]
 gi|170124261|gb|EDS93192.1| putative coproporphyrinogen III oxidase [Escherichia albertii
           TW07627]
          Length = 419

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 154/391 (39%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 34  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGG 92

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 93  GTPSALSARDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 153 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 212

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G  ++PS     DLY          G      S+  
Sbjct: 213 GLDGVDLYALNVLPNTPLGKAVENGRTIVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 272

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ +SW + V        
Sbjct: 273 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQSWHESVAAGQKP-- 326

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ GI        E+              
Sbjct: 327 --------------LMMMMRAAERNAQWRHTLQSGIETARVPLDELTPHAEKLAPLLTQW 372

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 373 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 402


>gi|256390375|ref|YP_003111939.1| coproporphyrinogen III oxidase [Catenulispora acidiphila DSM 44928]
 gi|256356601|gb|ACU70098.1| Coproporphyrinogen dehydrogenase [Catenulispora acidiphila DSM
           44928]
          Length = 445

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 94/401 (23%), Positives = 164/401 (40%), Gaps = 30/401 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
            G+G ++L  Y H PFC  +C +C+  +     +     ++ +   +   +R        
Sbjct: 33  RGEGRDALSFYTHIPFCEVRCGFCNLFTRTGAPESLTTAYLDALERQAIAVRAALDESGP 92

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYR 126
               ++   GGGTP+ + P  ++ + D   K   V    + +++EA+P++   +      
Sbjct: 93  APRFANAAIGGGTPTYLSPDELSRLFDIAEKVVGVGLGAIPLSVEASPATATPDRLTVLA 152

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           + G  R+SLGVQS ++   R   R   A++  AA+   R    P ++ DLIY +  QT  
Sbjct: 153 ERGTTRLSLGVQSFDDVEARSAVRPQKAADVFAALDAVRAADIPVLNVDLIYGIEGQTRE 212

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            W   LQ AL +  + + LY L +   T   +++ + D     +   +DLY   +     
Sbjct: 213 SWRASLQTALRWMPEEIYLYPLYVRPLTGLGRLNLNHDAE--WDAQRLDLYRCGRDFLLE 270

Query: 246 HGLHAYEISNHSFLGAESLH-NLNYWRYGD-YIGIGPGAHSRVKVGSHR--VAISIEKHP 301
           +G     +     L A  +    +Y    D  IG+G GA S      +    A+S  +  
Sbjct: 271 NGYEQVSMRMFRRLDAPVVEGGEDYACQTDGMIGLGCGARSYTASLHYSFDYAVSASEVR 330

Query: 302 ESWLKMVRKNGHAVVE-KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
               + V     + VE    L +++QA  FL+  L   +G+   D        L +    
Sbjct: 331 GIIDEYVATTDFSRVEVGYRLDADEQARRFLIQSLLQADGMERGDAVERFSAELAL---- 386

Query: 361 NLQRQGFIERV------------QFSRLRCTQRGMTMLDSV 389
            L  +GF+E V               RLR T  G+   D+V
Sbjct: 387 -LNDRGFLESVSDRASASASASGADGRLRLTPEGLAWSDAV 426


>gi|103487153|ref|YP_616714.1| coproporphyrinogen III oxidase [Sphingopyxis alaskensis RB2256]
 gi|98977230|gb|ABF53381.1| oxygen-independent coproporphyrinogen III oxidase [Sphingopyxis
           alaskensis RB2256]
          Length = 437

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 84/393 (21%), Positives = 149/393 (37%), Gaps = 25/393 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISS 73
            +  + +YVH PFC + C YC  N+     K    +++ +   E+  + +  G R  +  
Sbjct: 43  AATPISLYVHIPFCEQICWYCGCNTGAAGRKQRLADYLAALRAEVALVAKRLGGRGRVQR 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I FGGG+P+ I P  +  +LD I   +      EI+IE +P  ++         A V R+
Sbjct: 103 IAFGGGSPNAIAPVELVRLLDRILTVFDC-HRPEISIELDPRGLDAEWALVLAAARVTRV 161

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ+      + +GR    S     +   R      ++FDL+Y LP Q +   +  L 
Sbjct: 162 SLGVQTFAPHVQQAIGRIQPLSHIERVVAALRLRDIDAINFDLMYGLPGQRLEDLDATLD 221

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +  A   ++L+        +  +  +   ++LP + +  D   L     +A G H   
Sbjct: 222 ETIRLAPSRIALFGYAHLPD-MIPRQRQIDGVMLPDQRLRFDQAELGYRRLTAAGYHPVG 280

Query: 253 ISNHSF-------LGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
             + +           E   + N+  + +      +G G  A SR       + +  EK 
Sbjct: 281 FDHFARGDDPLAVAAREGRVSRNFQGFTEDMAPVLLGFGASAISRFPD----LLVQNEKR 336

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           P  +  MV     A      ++  ++     +  L  R   SV      A ++       
Sbjct: 337 PGPYRDMVGGGRLATARGIAVTDAERLRGAHICDLLCRGRTSVGP----ALQSAVRAAMA 392

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + +R G +E      L     G+     V A  
Sbjct: 393 DYERYGIVEWAGND-LVIRDDGLPYARHVAAQF 424


>gi|195970711|gb|ACG60749.1| SAM-dependent oxidase or methyl transferase [Streptomyces
           flavoviridis]
          Length = 424

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/403 (22%), Positives = 164/403 (40%), Gaps = 23/403 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-----HVRRYKVGQENFIQSFL 56
           + LSA  + +       L +YVH PFC+ KC +CD+        +R  +  + +++ +  
Sbjct: 9   ELLSAAADVVREDPDKRLAIYVHVPFCLSKCHFCDWVVDIPVRRLRYDEEERRDYLDALR 68

Query: 57  TEMQWMRQLTGP--RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
           T+++    L          +++GGGTP+ + P+ +  + + + +++ +S+  + ++E  P
Sbjct: 69  TQIRLYGPLLTGLGYRPEVMYWGGGTPTRLTPRELTHLAETVRESFDLSTLRQWSVETTP 128

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSF 173
           + +  +     R+AGV+R+S+GVQSL E  LR  GR H   +   A+ L R       + 
Sbjct: 129 NDLTEDRVAALREAGVDRMSIGVQSLSEYQLRVSGRAHGPDDVTRAVELLRAGGIDNFNV 188

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLI   P +T+        R L+    H+S+Y       T+         +         
Sbjct: 189 DLISGFPGETLDALGETFDRLLALDPPHVSVYPYRATPKTVMAMQLTRRQIEAHDRTAMT 248

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLH-----NLNYWRYGDYIGIGPGAHSRVKV 288
             Y L+     A G H Y    H +   +  H     N  Y   GD IG G GA S +  
Sbjct: 249 RAYELSMERLRAAGYHEY---CHGYWVRDPAHEDQDGNYKYDLTGDKIGFGSGAESIIG- 304

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
             H +  +  +  + +L     +      +  L    +    +   L  REG+  + +  
Sbjct: 305 --HHLLWNENRKYDEYLGHP--DRFTFAHRFSLDEPSRLTATVGGALMTREGVVFERFRR 360

Query: 349 LAGRNLDIECERNLQRQGFIERVQ-FSRLRCTQRGMTM-LDSV 389
           L G +     +    R+         +R   T   + M  D++
Sbjct: 361 LTGLSFHDVRDTPYFRRWLTVLTDCGARFAETPTALRMESDTI 403


>gi|291449110|ref|ZP_06588500.1| CalE1 [Streptomyces roseosporus NRRL 15998]
 gi|291352057|gb|EFE78961.1| CalE1 [Streptomyces roseosporus NRRL 15998]
          Length = 451

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/410 (19%), Positives = 162/410 (39%), Gaps = 21/410 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A  +    +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+ 
Sbjct: 28  ALRSLWAAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEELTARYLDALDRQALAVREA 87

Query: 66  TG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNN 121
            G   P   ++  FGGGTP+ +    +  + D   K      S V +++E +PS+   + 
Sbjct: 88  LGDEEPVRFAAAAFGGGTPTFLTAGELERLCDIAEKRMGADLSAVPLSVETSPSTATADR 147

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
                  G  R+S+GVQS  ++  R   R    ++  AA+   R+   P ++ DLIY + 
Sbjct: 148 LAVLADRGTTRVSIGVQSFVDEEARAAVRPQRRADVEAALGRIRDARIPVLNVDLIYGID 207

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP------SENVAVD 234
            QT   W   L  AL++  + L LY L +   T  +++    D           +   + 
Sbjct: 208 GQTERSWLASLDAALAWRPEELYLYPLYVRPLTGLHRLGAAADAEAQALEDTAWDEQRLR 267

Query: 235 LYNLTQSITSAHGLHAYEISNHSF--LGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSH 291
           LY + +    AHG     +          E     +Y    D  IG+G GA S      +
Sbjct: 268 LYAVGRDHLLAHGYEQVSMRMFRRSDAPREQEGPEDYACQTDGMIGLGCGARSYTSALHY 327

Query: 292 RVAISIE-KHPESWLKM--VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
               +++ +   S +      ++        ++  ++     L+  L    G+ V ++  
Sbjct: 328 SFDYAVDMREIRSIIDRFTTTEDFSRAEVGRYVDVDEARRRHLLQSLLQAAGLPVAEYRA 387

Query: 349 LAGRNLDIECERNL---QRQGFIERVQFSR-LRCTQRGMTMLDSVIANLA 394
             G +   +    L     +G+++       LR +  G+   D++   L 
Sbjct: 388 RFGTDPGADFPAELAGFAARGWLDASAPDGLLRLSPSGLAHSDALGPALF 437


>gi|293416947|ref|ZP_06659584.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291431523|gb|EFF04508.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 445

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 152/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +    ++  + + E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +   ++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQTWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  ++G   +PS     DLY          G      S+  
Sbjct: 239 GLDGVDLYALNVLSNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDAGWRCISNSHWG 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +       +   E++ ++W + V        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWHESVAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R           L+ G+        E+              
Sbjct: 353 --------------LMMIMRNAERNAQWRHTLQSGVETARVPLDELTPHAEKLAPLLAQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ++G   R   + LR T  G     +++ +L
Sbjct: 399 HQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|291084751|ref|ZP_06541863.2| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 197

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/192 (42%), Positives = 123/192 (64%), Gaps = 1/192 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     ++++ EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRARLNLAADAEITMEANPGTVEADRFIDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT+ +   +L++A++
Sbjct: 126 QSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQTLEEALNDLRQAIA 185

Query: 197 YAVDHLSLYQLT 208
               HLS YQLT
Sbjct: 186 LNPPHLSWYQLT 197


>gi|300726318|ref|ZP_07059770.1| coproporphyrinogen dehydrogenase [Prevotella bryantii B14]
 gi|299776343|gb|EFI72901.1| coproporphyrinogen dehydrogenase [Prevotella bryantii B14]
          Length = 453

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 83/415 (20%), Positives = 158/415 (38%), Gaps = 31/415 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQW 61
           YL A E++    GS  L  Y H+PFC + C YC  NS++  + K     ++ +   E+  
Sbjct: 31  YLKAIEDS-NQVGSKKLSFYFHFPFCRRLCHYCGCNSYMMPQDKSQVARYVDALHHEIDL 89

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +   L   R IS I +GGG+PS++    +  + + I   +      EI IE +P  +   
Sbjct: 90  VAKHLDPTRPISQIHYGGGSPSVLPTSILQELNEHILSLFPKIEKPEIAIECHPGYLSAA 149

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +++    +   R S+GVQ  +E+ L+ +GR  +       + +       ++ D +Y LP
Sbjct: 150 DWEALCNSHFTRFSIGVQDTDEKVLKAVGRTPSQMPIPEIVSILHAHGATVNTDFLYGLP 209

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   +  ++Q+ +    + L  +        +F +      + LP   V   +Y+   
Sbjct: 210 YQTPDTFVQDIQKTIEVRPERLVTFSYGHVP-WVFKRQQVLEKIGLPQPEVKQQMYDKAA 268

Query: 241 SITSAHGLHAYEISNHSFLG---AESLHN----LNYWRY------GDYIGIGPGAHSRVK 287
            +    G  +  + +         ++L N     N+  Y      G     G    S++ 
Sbjct: 269 QMLHEAGYQSIGLDHFVLPEDELYQALQNGQLYRNFQGYCTRRTTGQVYAFGVTGISQLD 328

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +   SI    E +L     +  +  +   L+ EQ+  + ++  L     I      
Sbjct: 329 SFYAQNTKSI----EEYLVATENDTLSTAKGYQLTPEQRIVKEVIERLMCNYRIQWAHIA 384

Query: 348 MLAGRNL---------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G  +         D    + +   G I  +    +  T  G   + +V A L
Sbjct: 385 KDLGITIEQVKAALHYDAVQLQEMADDG-IMNLTHEGITMTTEGHPFVRNVAAAL 438


>gi|238912155|ref|ZP_04655992.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 413

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 152/378 (40%), Gaps = 30/378 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVH PFC  +C +C+  +         +++I + +T+ Q M     P   +S   GGG
Sbjct: 41  HLYVHMPFCQSRCGFCNLFTCTGAENTFIDSYIDAIITQGQQMA--LAPVHWASFTVGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +   +     V  N+  TIE +P+              VNR+S+GVQS
Sbjct: 99  TPLLLNIAQLEKLFFSVFDVLNVDWNIYKTIETSPTDTTAEKVALLNAFSVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R HNA+ A  A+   +   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FHDSELHTLHRRHNAASAHQALEWLKAGHFPSLNIDIIYGIPGQTHASLTESLHQALVYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L LY L                  +P +      Y L + +    G     +     
Sbjct: 219 PEELFLYPL----------------YNMPRQENMHSYYVLARDLLRNAGYTQTSMRRFVL 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGH 313
             A S    +   + + + +G G  S +    +    S   + ++  K+++      +  
Sbjct: 263 NPAPSAAAES-CGFENSLALGAGGRSYLGNLHYCSPWS--SNLQTSRKIIQAFIDSPDKT 319

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
            +     L  ++    F++  L   +G+S+ D++     +   D        RQ +  + 
Sbjct: 320 VINHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFASDALRDFPDLERFIRQSYCYQ- 378

Query: 372 QFSRLRCTQRGMTMLDSV 389
             SRLR T+ GM + D +
Sbjct: 379 NGSRLRLTETGMALSDCL 396


>gi|294816241|ref|ZP_06774884.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444571|ref|ZP_08219305.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328840|gb|EFG10483.1| coproporphyrinogen III oxidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 468

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 79/404 (19%), Positives = 152/404 (37%), Gaps = 17/404 (4%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A       +  ++L +Y+H PFC  +C +C+  + V         ++ +   + + +R+ 
Sbjct: 53  ALRELWADEPMDALSLYLHIPFCEVRCGFCNLFTRVGAPDGLTGAYLDALARQAKAVRRA 112

Query: 66  TGP---RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNN 121
            G       ++  FGGGTP+ +    +  + D   ++       V +++EA+P++   + 
Sbjct: 113 LGDGRRVQFATAAFGGGTPTFLTAGELTRLCDIAEQDMGADLRAVPLSVEASPATATADR 172

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALP 180
                + G  R+SLGVQS  +   R   R    ++  AA+   R     + + DLIY + 
Sbjct: 173 LAVLAERGATRLSLGVQSFVDAEARAAVRPQRRADVEAALARVRAARIPVLNIDLIYGIE 232

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   W   L  AL++  + L LY L +   T   +     D     +   + LY   +
Sbjct: 233 GQTERSWRQSLDAALAWRPEELYLYPLYVRPLTGLGRQGTGAD--PAWDAQRLRLYRFGR 290

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----A 294
               AHG     +       A      ++    D  IG+G GA S  +   +        
Sbjct: 291 DHLRAHGYEQRSMRMFRRADAPPEVADDHTCQTDGMIGLGCGARSYTRTVHYSFDYAVGR 350

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             I +  + ++     +         L+ ++     L+  L   +G+    +    G   
Sbjct: 351 GRIREILDDYVSRPADDFAHAEYGRELTGDEARRRHLLQSLLRADGMDTGAYTACFGSAP 410

Query: 355 DIEC---ERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
             +          +G++E       LR T  G+   D++   L 
Sbjct: 411 AADFPGELARFAARGWLEPERADGVLRLTGEGLAHSDALGPELF 454


>gi|205355430|ref|ZP_03222201.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346664|gb|EDZ33296.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 355

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 139/333 (41%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + Q+   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFQALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I  +  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 DLITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|110637552|ref|YP_677759.1| coproporphyrinogen III oxidase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280233|gb|ABG58419.1| O2-independent coproporphyrinogen III oxidase [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 459

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/393 (19%), Positives = 148/393 (37%), Gaps = 25/393 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSI 74
              + +Y+H P+C   C YC  N+ +      +  +I+S L E +    L   + I + +
Sbjct: 59  HGGISLYIHLPYCESLCTYCGCNTRITVNHAVEMPYIKSVLKEWKLYLNLFKEKPILTEL 118

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+   P N+  ++  I  +  +  +   + E +P++    +     + G +R+S
Sbjct: 119 HLGGGTPTFFHPDNLEFLIRSILCDCIIPEHTSYSFEGHPNNTTKEHLDILYRLGFSRVS 178

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
            G+Q  +      + R       +     AR I    +++DL+Y LP QT+      + +
Sbjct: 179 FGIQDFDLHVQEIINRVQPLENVVRVTEEARAIGYTSINYDLVYGLPLQTLAGITDTISK 238

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +++   D ++ Y              K  +L LP + V   LY   +++    G     +
Sbjct: 239 SIALTPDRIAFYSYAHVPWLKPG-QRKYTELDLPDDEVKRALYEAGKALLLHAGYIDIGM 297

Query: 254 SNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
            + +  G          +LH  N+  Y     G  IG+G  A S     +        K 
Sbjct: 298 DHFALPGDALTRAADNGTLHR-NFMGYTAQHTGFAIGLGVSAIS----DTWGAFAQNVKT 352

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            E++ K+V  +   + +   L+ +       ++ +          W      +  I    
Sbjct: 353 VEAYQKLVDMDLIPIFKGHVLTKQDLKIRTHILAVMCTY---KTTWCKGDLSDALINRFA 409

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L+  G I     S L+ T  G   L ++    
Sbjct: 410 PLEADGLIITTSNS-LQVTDLGKAFLRNICIAF 441


>gi|9937241|gb|AAG02372.1|AF210249_32 coproporphyrinogen III oxidase-like protein [Streptomyces
           verticillus]
          Length = 424

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/395 (21%), Positives = 156/395 (39%), Gaps = 26/395 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-----HVRRYKVGQENFIQSFL 56
           + + A    +  +    L +YVH PFC  KC +CD+ +      +R     +  ++ +  
Sbjct: 9   RLIPAIREALGDEKDPRLALYVHVPFCSSKCHFCDWVTDIPVARLRGDSRERSPYVTALC 68

Query: 57  TEMQWMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
            ++++              +++GGGTP+ +    +  +   +   + ++   + ++E+ P
Sbjct: 69  DQIRFYGPQLTRLGYRPEVMYWGGGTPTRLTGDEMTAVHQALDDAFDLTGLRQWSVESTP 128

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSF 173
           + ++       R  GV R+S+GVQSL    LR  GR H+  +A+AA+ L R       + 
Sbjct: 129 NDLDPATLDTLRGLGVTRVSVGVQSLNPYQLRKAGRAHSREQALAAVPLLRRAGIDEFNV 188

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DLI   P + +  +E  L+  L+    H+S+Y       T+         +   + +  +
Sbjct: 189 DLIAGFPGEAVESFEETLRTVLALDPPHVSVYPYRATPKTVMAMQLDREFVEARNRDGMI 248

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLH-----NLNYWRYGDYIGIGPGAHSRVKV 288
           D Y    +   A G H Y    H +   ++ H     N  Y   GD IG G GA S +  
Sbjct: 249 DAYERAMAALGAAGYHEY---CHGYWVRDARHEDQDGNYKYDLAGDKIGFGSGAESIIGH 305

Query: 289 GSHRVAIS-IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
                  S   ++  +  +    +     E + L++       +   L  REG+    + 
Sbjct: 306 HLLWNENSAYARYLLAPREFSAAHRFTTAEPDRLTAP------VGGALMTREGVVFARFR 359

Query: 348 MLAGRNLDIECERNLQRQ--GFIERVQFSRLRCTQ 380
            L G +          RQ    +ER    R   T 
Sbjct: 360 RLTGLDFADVRATPYFRQWFELLERC-GGRFVETP 393


>gi|297563032|ref|YP_003682006.1| coproporphyrinogen dehydrogenase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847480|gb|ADH69500.1| Coproporphyrinogen dehydrogenase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 448

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 74/397 (18%), Positives = 145/397 (36%), Gaps = 19/397 (4%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-Q 64
           A  +   G+   +L +Y H PFC  +C +C+  +           ++ +   + + +   
Sbjct: 39  ALADLWRGEDVGALSLYAHIPFCEMRCGFCNLFTRSTPPAEQVTAYLDALERQAEAVAGA 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQ 123
           L    + +    GGGTP+ +  + +  + D     + V  S + +++E +P++   +   
Sbjct: 99  LPEGAAFARAALGGGTPTYLTAEELTRVYDLTESAFGVDLSAIPVSVETSPATATPDRLA 158

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQ 182
                G  RIS+GVQS  +      GR    +E   A+   R +    ++ DLIY + +Q
Sbjct: 159 VLDARGATRISMGVQSFLDAEAHAAGRPQKRAEVDRALAAIREHASADLNLDLIYGIDRQ 218

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               W   L  AL +  + + LY L +   T   +  +  D      +  + LY   +  
Sbjct: 219 DARTWAYSLDTALEWEPEEVYLYPLYVRPLTGLGRRARAWD------DHRLGLYRQGRDH 272

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AIS 296
               G     +       A      ++    D  +G+G GA S      +          
Sbjct: 273 LRERGYEQVSMRMFRRADAPKTQAPDHSCQTDGMVGLGCGARSYTSAAHYSFDYAVGVGQ 332

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
           +      +    + +         +   ++    L+  L L EG+    +    G   + 
Sbjct: 333 VRSIIADYTSRRQADFGRAEVGFRMDEGERRRRHLLQSLLLAEGMDTAAYADRFGSRPEE 392

Query: 357 ECERNLQ---RQGFIERV-QFSRLRCTQRGMTMLDSV 389
           +    L     +G++ER      LR T  G+   D+V
Sbjct: 393 DFAATLAVLDGRGWLERDGAPDLLRLTPEGLAHSDAV 429


>gi|283777943|ref|YP_003368698.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
 gi|283436396|gb|ADB14838.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
          Length = 446

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 83/387 (21%), Positives = 161/387 (41%), Gaps = 18/387 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +  ++L +Y+H PFC  +C +C+  ++ +       N++ +   +M+ + +       + 
Sbjct: 46  ESRSALSLYIHIPFCEMRCGFCNLFTYSQPADDWVANYLSALGRQMEVVAEQIPAAQFAQ 105

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +  GGGTP+ ++   +A +L+ + +   V   N+ I++EA+P++ +   F   R  GV R
Sbjct: 106 LALGGGTPTFLQTAELAQLLEQLKRVLDVPLGNLPISVEASPATTDDEKFALLRHYGVTR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +SLG+QS +   L  +GR     +   AI   R   FP ++ DLIY    QT   W   L
Sbjct: 166 LSLGIQSFDADDLGAIGRPQKHDDVTRAIERIRRAGFPILNLDLIYGGEAQTRRGWLESL 225

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A  Y  + L LY L +   T                +  ++ Y   +    A+     
Sbjct: 226 RAAAQYEPEELYLYPLYVRPLTGLGSRPAKA-----PSDQRLERYREARDWLLANQYEQV 280

Query: 252 EISNHSFLGAESLHNLN-YWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKH-----PESW 304
            +     +G         Y    D  IG+G GA S  +   +    ++ +        ++
Sbjct: 281 SMRMFRRMG-PCEQTTTRYACQSDGMIGLGVGARSYTRQLHYASRFAVRQKSILGIIRNY 339

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNL 362
           ++        V     L +E+Q   +L++ L   EG+  + ++     +L  D    R L
Sbjct: 340 IEQSPAEMGTVAHGIELHNEEQRRRYLLLSLLQVEGLDARAYQQHFASDLWNDFPQLRGL 399

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSV 389
                +   +   L  T  G+ + D++
Sbjct: 400 VDH-HLATFEGELLALTPAGLELSDAI 425


>gi|163814886|ref|ZP_02206274.1| hypothetical protein COPEUT_01037 [Coprococcus eutactus ATCC 27759]
 gi|158449825|gb|EDP26820.1| hypothetical protein COPEUT_01037 [Coprococcus eutactus ATCC 27759]
          Length = 521

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 23/318 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +Y+  PFC  +C YC F S+ +  YK   E ++ +   EM+++ +    + + SI
Sbjct: 192 EDEYCLYIGIPFCPTRCLYCSFTSYPIAVYKDKVEAYLDALEKEMEYVAEAYSRKKLISI 251

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS I  +N+  +   I + + +S   E TIEA  P S   +     +K GV RI
Sbjct: 252 YIGGGTPSSISAENMDRLCGMIERAFDLSYVREFTIEAGRPDSTTYDKLAVMKKHGVTRI 311

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ EQ+LR +GR H   +   A+ +AR   F  ++ DLI  LP +     E  L+
Sbjct: 312 SINPQTMNEQTLRTIGRAHTPDQTREAMEMARRVGFDNINMDLIVGLPGEDTDAVENTLR 371

Query: 193 RALSYAVDHLSLYQLTIEK-GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +    A + L+++ L +++  TL  +M +  DL+       +D              + Y
Sbjct: 372 QIRELAPESLTVHTLAVKRAATLNIEMDRYKDLLKNDIESQLDAVTRAADDMGLSPYYLY 431

Query: 252 ---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR---------VKVGSHR 292
                    E   +S  G E L+N+       D +G+G G+ S+         V  G+  
Sbjct: 432 RQKNMTGNLENVGYSKEGLECLYNILIMEERTDIVGLGAGSSSKLVVRPGHDGVTEGTRI 491

Query: 293 VAISIEKHPESWLKMVRK 310
             I   K  + ++  + +
Sbjct: 492 DRIENCKSVDDYISRIDE 509


>gi|153951392|ref|YP_001398180.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938838|gb|ABS43579.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. doylei 269.97]
          Length = 355

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 140/333 (42%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKKDIIFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I A+  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKAGFKNINLDLIYDTKLDNKKMLEFELLHLKKIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 ALITHLSAYNLTIESNTAFAKKEHFKK------NAPNLIKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   ++   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|15804047|ref|NP_290083.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933]
 gi|15833637|ref|NP_312410.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168746962|ref|ZP_02771984.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4113]
 gi|168753312|ref|ZP_02778319.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4401]
 gi|168759583|ref|ZP_02784590.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4501]
 gi|168765907|ref|ZP_02790914.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4486]
 gi|168772547|ref|ZP_02797554.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4196]
 gi|168779643|ref|ZP_02804650.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4076]
 gi|168785365|ref|ZP_02810372.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC869]
 gi|168797330|ref|ZP_02822337.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC508]
 gi|195935030|ref|ZP_03080412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808940|ref|ZP_03251277.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208814241|ref|ZP_03255570.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208818610|ref|ZP_03258930.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209395960|ref|YP_002272979.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217326043|ref|ZP_03442127.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. TW14588]
 gi|254795455|ref|YP_003080292.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261224817|ref|ZP_05939098.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254287|ref|ZP_05946820.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291284875|ref|YP_003501693.1| putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
           str. CB9615]
 gi|12518212|gb|AAG58644.1|AE005576_3 putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EDL933]
 gi|13363857|dbj|BAB37806.1| putative coproporphyrinogen oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187771599|gb|EDU35443.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188018368|gb|EDU56490.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4113]
 gi|189002627|gb|EDU71613.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189359172|gb|EDU77591.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189364804|gb|EDU83223.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189369751|gb|EDU88167.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4501]
 gi|189374481|gb|EDU92897.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC869]
 gi|189379883|gb|EDU98299.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC508]
 gi|208728741|gb|EDZ78342.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208735518|gb|EDZ84205.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208738733|gb|EDZ86415.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209157360|gb|ACI34793.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217322264|gb|EEC30688.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. TW14588]
 gi|254594855|gb|ACT74216.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290764748|gb|ADD58709.1| Putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
           str. CB9615]
 gi|320639818|gb|EFX09412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645318|gb|EFX14334.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str.
           493-89]
 gi|320650629|gb|EFX19095.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H
           2687]
 gi|320655823|gb|EFX23746.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661605|gb|EFX29020.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666628|gb|EFX33611.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337500|gb|EGD61335.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044]
          Length = 445

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/402 (22%), Positives = 155/402 (38%), Gaps = 41/402 (10%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTG 67
           N T      L VY+H PFC   C +C F  + R  +    ++  + + E++      L  
Sbjct: 50  NQTASPRKRL-VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQ 107

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I +++FGGGTPS +   ++A I+  + +   ++ + EITIE    + +         
Sbjct: 108 SAPIHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLD 167

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
           AG NR S+G+QS   +  + + R  +   AIA +  L +     +  DL++ LP Q    
Sbjct: 168 AGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQT 227

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  +L  A    +D + LY L +   T   K  ++G   +PS     DLY          
Sbjct: 228 WGEDLAIARDIGLDGVDLYALNVLSNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDA 287

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G      S+      E +L+NL   +  D +  G GA   +       +   E++ ++W 
Sbjct: 288 GWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWH 343

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAG 351
           + V                      LM+ +R           L+ G+        E+   
Sbjct: 344 ESVAAGKKP----------------LMLIMRNAERNAQWRHTLQSGVETARVPLDELTPH 387

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       ++G   R   + LR T  G     +++ +L
Sbjct: 388 AEKLAPLLAQWHQKGL-SRDASTCLRLTNEGRFWASNILQSL 428


>gi|320191451|gb|EFW66101.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|326340026|gb|EGD63833.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125]
          Length = 419

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/402 (22%), Positives = 155/402 (38%), Gaps = 41/402 (10%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTG 67
           N T      L VY+H PFC   C +C F  + R  +    ++  + + E++      L  
Sbjct: 24  NQTASPRKRL-VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQ 81

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I +++FGGGTPS +   ++A I+  + +   ++ + EITIE    + +         
Sbjct: 82  SAPIHAVYFGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLD 141

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
           AG NR S+G+QS   +  + + R  +   AIA +  L +     +  DL++ LP Q    
Sbjct: 142 AGANRFSIGIQSFNSKIRKKMARTSDGPTAIAFMESLVKRDRAAVVCDLLFGLPGQDAQT 201

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           W  +L  A    +D + LY L +   T   K  ++G   +PS     DLY          
Sbjct: 202 WGEDLAIARDIGLDGVDLYALNVLSNTPLGKAVENGRTTVPSPAERRDLYLQGCDFMDDA 261

Query: 247 GLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           G      S+      E +L+NL   +  D +  G GA   +       +   E++ ++W 
Sbjct: 262 GWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGAGGSING----YSWMNERNLQTWH 317

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLR-----------LREGISVKDW---EMLAG 351
           + V                      LM+ +R           L+ G+        E+   
Sbjct: 318 ESVAAGKKP----------------LMLIMRNAERNAQWRHTLQSGVETARVPLDELTPH 361

Query: 352 RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                       ++G   R   + LR T  G     +++ +L
Sbjct: 362 AEKLAPLLAQWHQKGL-SRDASTCLRLTNEGRFWASNILQSL 402


>gi|157414862|ref|YP_001482118.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385826|gb|ABV52141.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747499|gb|ADN90769.1| Putative oxidoreductase [Campylobacter jejuni subsp. jejuni M1]
          Length = 355

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 140/333 (42%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I A+  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 ALITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   ++   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|154482687|ref|ZP_02025135.1| hypothetical protein EUBVEN_00363 [Eubacterium ventriosum ATCC
           27560]
 gi|149736463|gb|EDM52349.1| hypothetical protein EUBVEN_00363 [Eubacterium ventriosum ATCC
           27560]
          Length = 493

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/313 (21%), Positives = 144/313 (46%), Gaps = 20/313 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +YV  PFC   C YC F S+ +  YK   ++++ S + E++++ +    R ++++
Sbjct: 169 KEGYSLYVGIPFCPTTCLYCSFTSYPISMYKDKVDSYVDSVIKEIKFLGEQLKGRELNTV 228

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  + +N+  S+  E T+EA  P S+     +  +K  V+RI
Sbjct: 229 YIGGGTPTTLEPDQMDRLITSLKENFDFSTVREFTVEAGRPDSITEEKLKTLKKHNVSRI 288

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +   A  LAR   F  ++ D I  LP++        ++
Sbjct: 289 SINPQTMNQETLDIIGRRHTVEQIKEAFKLARQCGFNNINMDFILGLPQEDEKMVRYSME 348

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
            A   + + ++++ L +++                    + +L  +T+  +    +  Y 
Sbjct: 349 EAKKLSPEGITVHSLALKRAARLN--IMKDKYSDMHMENSSELMKVTEKYSEEMNMKPYY 406

Query: 252 -----------EISNHSFLGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIE- 298
                      E   +S  G E L+N+     + D   +G GA +++     +    I+ 
Sbjct: 407 LYRQKNMAGNQENVGYSIEGCEGLYNILMMGDFQDVWAVGAGAVTKLLSPDRKEGKRIDT 466

Query: 299 -KHPESWLKMVRK 310
            K+ + +++ + +
Sbjct: 467 VKNVDQYIERIDE 479


>gi|149189564|ref|ZP_01867847.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148836543|gb|EDL53497.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 454

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/389 (22%), Positives = 156/389 (40%), Gaps = 42/389 (10%)

Query: 21  VYVHWPFCVKKCPYCDF--NSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFF 76
           VY+H PFC   C +C F  N +V       + + Q+ + E++   Q  L     I +++F
Sbjct: 59  VYIHIPFCETHCTFCGFYQNKYVST---AADRYAQALIQEIKMEAQSPLHQSAPIHAVYF 115

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +   ++A I+  + +   ++ + EITIE    +   +       AGVNR SLG
Sbjct: 116 GGGTPTALNASDLANIVKTLREELPLAPDCEITIEGRVLNFTDDKISSCIDAGVNRFSLG 175

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+ +    + L R     EA   +  L       +  DL++ LP Q++  W+ +L  A 
Sbjct: 176 IQTFDSNIRKRLSRTSTGDEAQTFLRKLVETEQAAIVCDLLFGLPNQSLESWQRDLDIAH 235

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +D + LY L +   T+  K   +  + +P+     DLY          G H    S+
Sbjct: 236 DIGLDGVDLYALNVLPNTILGKAAANNRVDIPTPAQCRDLYLHGSEYLDQLGWHTISNSH 295

Query: 256 HSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            +    E +L+NL      D +  G  +   +   S+     +E++ ES+   +      
Sbjct: 296 FARTTRERNLYNLLIKEGADCLAFGSCSGGSINGYSYM----VERNLESYFAQIENQQKP 351

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGI-----SVKDWEMLAGRNLDI------ECERNLQ 363
                           LMM +R  +G       ++         LD       +    L 
Sbjct: 352 ----------------LMMMMRSTDGAYQWRHDLQSGVEKGRIPLDELTPNANQLLPLLS 395

Query: 364 R--QGFIERVQFSRLRCTQRGMTMLDSVI 390
           +  Q  I +   + +R T  G     +++
Sbjct: 396 QWHQCGITQSDSTCVRLTNEGRFWASNIL 424


>gi|315931779|gb|EFV10734.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 361

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 140/333 (42%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I A+  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 ALITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   ++   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LSS+    E L +GLR   GI       
Sbjct: 284 RSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|260574218|ref|ZP_05842223.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
 gi|259023684|gb|EEW26975.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter sp.
           SW2]
          Length = 451

 Score =  220 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 143/396 (36%), Gaps = 22/396 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
             +S+ +Y+H PFC + C +C   +           + +    E+  +  +L     +S 
Sbjct: 47  AGSSVSLYLHVPFCRRLCWFCACRTQGTSSDEPVRAYARVLKAEIALLKARLAPGVHLSR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+L++P  I  +   I     +    E ++E +P+ V+        ++G+NR 
Sbjct: 107 LHWGGGTPTLLQPDMIRDLAATIFDAVPMGPGAEFSVEIDPNEVDDARLDALAQSGMNRA 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +    + +GR  +           R      ++ D++Y LP QT  +    +Q
Sbjct: 167 SIGVQDFDPMIQKVIGREQSFELTKQVADAIRARGVKSLNADILYGLPHQTQARITDSVQ 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + L+ + D ++LY        +  +        +PS    + L+     +  A G     
Sbjct: 227 KLLALSPDRVALYGYAHVP-WMSRRQQMIPGDAMPSAEDRLKLFETATRLFMADGYREIG 285

Query: 253 ISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           I + +          A      N+  Y D      IG+G  + SR   G  +        
Sbjct: 286 IDHFALPTDGMAIAAANGTLRRNFQGYTDDTSPVLIGLGASSISRFPQGFAQNLSGTS-- 343

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IE 357
              + K +R    +         E +    ++  L     ++ ++     G   +    +
Sbjct: 344 --DYTKAIRAGHFSTHRGHVFEGEDKVRGRIIEALMCDFKVNREELIRDFGVTAEWVQTQ 401

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             +       + ++  + L    R   +   +    
Sbjct: 402 FRKAADAFPDMVKLDETGLSLPVRARPLSRMIARTF 437


>gi|283955992|ref|ZP_06373481.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792468|gb|EFC31248.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 355

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 140/333 (42%), Gaps = 26/333 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS G QS
Sbjct: 62  TPSCVDAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNIGVNRISFGAQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I A+  A  I F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKALENANKIGFKNINLDLIYDTKLDNKKMLEFELLYLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 ALITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           S   A+   HNL YW+  +Y+  G  A    +      A +++ + E+            
Sbjct: 233 SKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIEN---------PTF 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              E LS +    E L +GLR   GI       
Sbjct: 284 RSIEQLSFKDLNLEHLFLGLRSIVGIDETKLNQ 316


>gi|288801340|ref|ZP_06406794.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288331723|gb|EFC70207.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 456

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 79/414 (19%), Positives = 153/414 (36%), Gaps = 30/414 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            YLSA + +      N +  Y+H P+C   C YC  NS+        + ++++   E+  
Sbjct: 32  DYLSAVDAS-NDANRNHVSFYLHIPYCNHLCHYCGCNSYAMAKGQQVDKYVEALHREIDI 90

Query: 62  MRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           +        R IS I +GGG+P+ +    +  + + +          EI IE +P  +  
Sbjct: 91  VAAHIDKANRRISQIHYGGGSPTSLPIHYVKELNEHMLSLMPTIEKPEIAIECHPGYLNE 150

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
           +++    + G  R SLG+Q      L+ + R  +       + + R     ++ D ++ L
Sbjct: 151 SDWNALCECGFTRYSLGIQDFNNDVLKAVNRLPSLLPVSEILSILRAHQATINMDFLFGL 210

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +E  +Q A+    D L  +        +  +      L LP+ +V  D+ N  
Sbjct: 211 PLQTPESFEKTMQMAVEMQPDRLVTFSYGHVP-WVHKRQLILEKLGLPTADVKQDMMNRA 269

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            ++  + G  +  + +      E          + N+  Y      G     G    S++
Sbjct: 270 INVLHSAGYRSIGMDHFVKPNDELSVALDSKQLHRNFQGYCTLRTTGQVYAFGVTGISQL 329

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
                +   +I K+ +S L     N   +     LSS++Q    ++  +     I     
Sbjct: 330 GNAYAQNGRNISKYIDSIL---NDNNLDIERGYILSSQEQVVREVIETMMCNNEIEWNKL 386

Query: 347 EM---------LAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
                       A  N D+   + +   G I   +   +  T  G   + +V+A
Sbjct: 387 SKELNLSVESIQATLNYDVLKLQEMANDGLITMTEQG-ISMTTSGSPFVRNVVA 439


>gi|332830587|gb|EGK03201.1| oxygen-independent coproporphyrinogen III oxidase [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 455

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 80/384 (20%), Positives = 144/384 (37%), Gaps = 30/384 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +    + VY+H PFC   C YC  NS + R       +I +   E++ +  L    R IS
Sbjct: 44  ENPRHISVYIHIPFCYHMCFYCGCNSQLLRDNDIVLKYIDALKKEIRMVLPLLDRNRKIS 103

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I +GGGTP+      +  + + I   +    N EI IE +P   +   +     AG NR
Sbjct: 104 QIHYGGGTPTSQPVSVLKELNELILSEFDCIENPEIAIECHPGYADEGYWNELVDAGFNR 163

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           ISLGVQ  +E+ L+   R          + + RN    ++ D IY LP QT   +   + 
Sbjct: 164 ISLGVQDFDEEVLKASNRKAPRMAMEDVVRILRNRNVSLNMDFIYGLPLQTPESFTKTIN 223

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           RA+S   D +  +        +         + LPS  +   LY   + + +  G     
Sbjct: 224 RAISLRPDRIVTFSYAHVP-WVNELQKNLEKVGLPSVEIKSQLYTTAKKLLTDAGYKVIG 282

Query: 253 ISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRVKVGSHRVAISIE 298
           + +      E        +LH  N+  Y      G     G    S++     +      
Sbjct: 283 LDHFVLPDDELFAAQQSKALHR-NFQGYCTRRTTGQVYAFGITGISQLATAYSQNT---- 337

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW---------EML 349
           K   ++++ + +    + +   L+ E+Q    ++  L     ++  +          ++ 
Sbjct: 338 KDLNTYIRQINEGVFPIAKGYILNEEEQITREVISQLMCNYTVNWPELSNTLDIPVAKIK 397

Query: 350 AGRNLDIECERNLQRQGFIERVQF 373
           +  N +    +     G IE  + 
Sbjct: 398 SAVNYNETALQAFAADGIIEYNED 421


>gi|296114287|ref|ZP_06832941.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295979048|gb|EFG85772.1| oxygen-independent coproporphyrinogen III oxidase
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 454

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/402 (20%), Positives = 154/402 (38%), Gaps = 31/402 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
             ++L +Y+H PFC   C +C  N+ V R    +  +    + E++ +  QL     +S 
Sbjct: 45  AGDALSLYLHVPFCDTLCRFCGCNTAVLRSADARAAYAALLIEELRRVTEQLGAGHPVSH 104

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+ +    +  ++  I  ++T+  + EI+IE +P  +         + G NR 
Sbjct: 105 LQWGGGTPTTLPVGTLRQVMQTIRNSFTLLPDAEISIEIDPRHLPAQYPAVLHELGFNRA 164

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           SLGVQ ++       GR  +  +    I   R    R ++ DLIY LP+Q++        
Sbjct: 165 SLGVQDIDPTVQEACGRIQSLEQTRTCIDALRGAGIRAINIDLIYGLPRQSVRGVRDTAT 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL---- 248
              + + D L+++           + +      LP      +          A G     
Sbjct: 225 AIAALSPDRLAVFGYAHVP-WKQKRQNLMPTGELPDAIARFEQRAAINDALCAAGYLPVG 283

Query: 249 -HAYEISNHSFLGAESLHN----LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIE 298
              Y  S+H+     +  N     N+  Y        IG+G  A S    G  + A+S  
Sbjct: 284 LDHY--SHHADPMGIAARNGTLHRNFQGYTTDPATTLIGVGASAISSFPQGMTQNAVSA- 340

Query: 299 KHPESWLKMVRK--NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL-- 354
               ++ +++ +  +   VV     + + +    L+  L     I +  +    G     
Sbjct: 341 ---AAYARLMGETPDRLPVVRGVRRTDDDRVRAELIERLMCDMEIDLGAFIARHGLRAGY 397

Query: 355 ---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              D+     L+  GF+  +   RL  T+ G   L  V A  
Sbjct: 398 FSDDMRKLSGLETDGFV-IISGQRLHVTEAGRAFLRHVAAAF 438


>gi|60681472|ref|YP_211616.1| coproporphyrinogen III oxidase [Bacteroides fragilis NCTC 9343]
 gi|60492906|emb|CAH07682.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteroides fragilis NCTC 9343]
          Length = 454

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 83/416 (19%), Positives = 159/416 (38%), Gaps = 32/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +YL A + +       +L  Y+H PFC   C YC  NS+        E+++++   E+  
Sbjct: 32  RYLEAVQQS-NQASERALSFYLHIPFCRHLCHYCGCNSYPMARPEIIESYVEALHQEIDL 90

Query: 62  MRQLT-GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  L    RSI+ I +GGG+P+ I    I  +   +  ++      EI IE +P  +   
Sbjct: 91  ILPLLDKDRSIAQIHYGGGSPTAIPVALIKELNAHLLSSFPAIDRPEIAIECHPGYLSEK 150

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           ++    + G NR+S+GVQ    + L+ + R  +         L R     ++ D +Y LP
Sbjct: 151 DWLQLTECGFNRLSIGVQDFNIEVLKTVNRRPSLLPMEDIFILLREKGISINLDFLYGLP 210

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQT+  +   +++A+  + D L ++        +  +        LP  +    +++   
Sbjct: 211 KQTVENFTRNIEQAILLSPDRLVMFSYAHVP-WINKRQLLLEKSGLPDNHEKQTMFDTAA 269

Query: 241 SITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRV 286
            +    G  +  + +      E         LH  N+  Y          G+G  A S++
Sbjct: 270 GLLHKSGYQSIGMDHFVRPNDELSIAMQTKKLHR-NFQGYCTRRTTAQVYGLGITAISQL 328

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
           +    +      K    ++K + K   ++ +   LS  +Q    ++  L     I  ++ 
Sbjct: 329 ESAYAQNT----KDIPHYIKTISKGELSITKGYALSPTEQLTREVIETLMCNGCIDWRNL 384

Query: 347 ---------EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                     + A    D +        G I       L  T  G   + +V A+L
Sbjct: 385 SKCLHVSVSTLKAATAYDEKKLSGFADDGLIYYTD-DYLEMTTAGSAFVRNVAASL 439


>gi|57168184|ref|ZP_00367323.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
 gi|57020558|gb|EAL57227.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
          Length = 355

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 146/329 (44%), Gaps = 26/329 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           + +Y+H PFC  KC YC F S   +    +  + ++   ++ +  Q       SI ++F 
Sbjct: 1   MHLYIHIPFCESKCHYCAFTS--LKKHDYENRYFEALYEDISFHLQKLNIKKNSIKTLFI 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS +  +N  +IL  +     +S N+E + EANP+S ++   +  +  G+NRIS G
Sbjct: 59  GGGTPSAVSAKNFEMILTLLEPF--LSKNIEFSSEANPNSADIEWLKTMKNLGLNRISFG 116

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            QS   + L FLGR H+      A+       F +++ DLIY          E EL++  
Sbjct: 117 AQSFHTKKLEFLGRIHDQKMIFKALENVNKLGFKKINLDLIYDTKLDDKKMLEFELKQLK 176

Query: 196 SYA--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + HLS Y LTIE  + F K              A  L           G   YEI
Sbjct: 177 QIKNLITHLSAYNLTIEPLSAFAKKDHFKK-------NAPYLMKFFIQELQKLGFLQYEI 229

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           SN +    +   HNL YW+  DY+G G  A S  K      A +++ + ++ +       
Sbjct: 230 SNFAKNKTQICKHNLAYWKGLDYLGCGLSAVSCYKNERFYTAKNLKSYLQNPIFR----- 284

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGI 341
               + E L+ E    E L +GLR   GI
Sbjct: 285 ----DVEKLNQEDLNLEHLFLGLRSIVGI 309


>gi|108759540|ref|YP_631099.1| coproporphyrinogen III oxidase [Myxococcus xanthus DK 1622]
 gi|108463420|gb|ABF88605.1| coproporphyrinogen III oxidase family protein [Myxococcus xanthus
           DK 1622]
          Length = 438

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 80/394 (20%), Positives = 164/394 (41%), Gaps = 18/394 (4%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
             E+    +  ++L +Y+H PFC  +C +C+  +     +   + ++ + + E + +++ 
Sbjct: 34  PLESVWAEERRDALFLYIHVPFCEMRCGFCNLFTAAGPKQDVVDGYLGALVRETKRVKEA 93

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQG 124
            G  S +    GGGTP+L++   +  + D           N+ +++E +P +V+    Q 
Sbjct: 94  LGTASFARAAIGGGTPTLLDVAGLNTVFDMAEGVMGADMKNIPVSVEVSPETVDAQKLQV 153

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQT 183
            R  G +R+S+G+QS  E  +  + R    ++  AA+ L R+  FP ++ DLIY +  QT
Sbjct: 154 LRSRGTDRVSMGIQSFIEAEVAAVKRPQKTAQVEAALDLIRSTGFPTLNLDLIYGMEGQT 213

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +   L+ AL Y+ + + LY L +   T   K  +  D      ++ + LY + +   
Sbjct: 214 EESFLYSLRTALRYSPEEIYLYPLYVRPLTFLGKKARAWD------DLRLSLYRVGRDFL 267

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISI 297
            + G     +       A       Y    D  +G+G GA S      +       +  +
Sbjct: 268 LSEGYTQVSMRMFRARHAPDAGGPVYRCQEDGMVGLGCGARSYTGQVHYSSEYAVGSREV 327

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--D 355
                S+ +    +   V     L S ++   ++++ L L +G+ +  +      +   D
Sbjct: 328 RSIISSYSERSEASFGEVGYGFRLDSAERRRRYMLLSL-LADGVDLAVYRQRFCSDALED 386

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 L+  G   R     ++ T  G+   D +
Sbjct: 387 FPELEELEAHGL-ARKNGGVVQLTAAGVERSDMI 419


>gi|291524426|emb|CBK90013.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium rectale DSM 17629]
          Length = 531

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 30/335 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    +K   ++++ +   E+ +  Q    + ++SI
Sbjct: 205 DNGYSLYIGIPFCPSTCAYCSFTSYPLGVWKNRVDDYLDALEKEIDYTAQKFYHKKLNSI 264

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  +  ++  I  ++ +   +E T+EA  P S+        +K G++RI
Sbjct: 265 YIGGGTPTTLSPAQLDRLIRKIKCSFDLKDCLEFTVEAGRPDSITREKLLALKKNGISRI 324

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++Q+L  +GR+H   + I +  LAR   F  ++ DLI  LP++T+      ++
Sbjct: 325 SVNPQTMKQQTLDIIGRHHTVDDTIQSFKLARELGFDNINMDLIMGLPEETLDDVRHTME 384

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                A D+++++ L +++    T+F   + D  +V   E++ +      Q     + L+
Sbjct: 385 LVKELAPDNVTIHSLAVKRAARLTIFKDRYSDMQMVNTQEHMDLCAAYCKQMGLEPYYLY 444

Query: 250 A-------YEISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV-A 294
                    E   ++  G   ++N+        I   G GA ++         G+HR+  
Sbjct: 445 RQKGMAGNMENVGYAAKGKAGVYNILIMEEKQTIVACGAGASTKRVWPVPNPDGTHRIDR 504

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
               K    ++  +          E +  +Q+  E
Sbjct: 505 CENVKDVGQYIARID---------EMIERKQRLFE 530


>gi|254487023|ref|ZP_05100228.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter sp.
           GAI101]
 gi|214043892|gb|EEB84530.1| oxygen-independent coproporphyrinogen III oxidase [Roseobacter sp.
           GAI101]
          Length = 451

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/364 (20%), Positives = 137/364 (37%), Gaps = 27/364 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L+A  +         + +Y+H PFC + C +C   +   +     + ++ + L E+  
Sbjct: 40  EWLAAVPD------GAQVSLYLHIPFCKRLCWFCACRTQGTKTMRPVDAYVDTLLIEIDR 93

Query: 62  MRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            R L     S+S +  GGGTP+++ P  +A +LD +   +   +  E ++E +P+     
Sbjct: 94  QRALLPADVSLSRLHLGGGTPTILTPDIMARLLDRVFDRFARGAGFEFSVEIDPTEASAA 153

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYAL 179
                   G+NR S+GVQ  + +    +GR  + ++  A + HL       ++ DL+Y L
Sbjct: 154 LLDTLIAYGMNRASIGVQDFDPKVQNAIGRQQSFAQTHATVAHLRAANLRSLNMDLLYGL 213

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNL 238
           P QT       L++ ++   D L+LY           K     D   LPS      L   
Sbjct: 214 PHQTGPGLTASLEQVMALQPDRLALYGYAHVP--WMSKRQLMIDSAALPSPQARFQLAEQ 271

Query: 239 TQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRV 286
            + +    G     I + +          A      N+  Y D      IG+G  A S+ 
Sbjct: 272 AREMLMLDGFVPIGIDHFARPDDGLSIALANGQLRRNFQGYTDDTAEVLIGMGASAISKF 331

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             G  +   S       +   +     A  +   L+         +  L  R  I+  D 
Sbjct: 332 PQGYSQNYPST----AQYTSAIGAGDLAADKGHVLTQTDLWVARAIEQLMCRFEINTIDL 387

Query: 347 EMLA 350
               
Sbjct: 388 RAQF 391


>gi|329998595|ref|ZP_08303179.1| radical SAM domain protein [Klebsiella sp. MS 92-3]
 gi|328538614|gb|EGF64714.1| radical SAM domain protein [Klebsiella sp. MS 92-3]
          Length = 197

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 82/192 (42%), Positives = 121/192 (63%), Gaps = 1/192 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L ++Q        R I +IF G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLQADAHYAQGREIGTIFIG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL+    +  +LDG+     +++  EIT+EANP +VE + F  Y++AGVNRIS+GV
Sbjct: 66  GGTPSLLSGPAMQTLLDGVRACLPLAAGAEITMEANPGTVEADRFVDYQRAGVNRISIGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS  E  L+ LGR H   EA  A  LA  +  R  + DL++ LP Q++ +   +L++A++
Sbjct: 126 QSFSEPKLQRLGRIHGPEEAKRAARLASGLGLRSFNLDLMHGLPDQSLEEALDDLRQAIA 185

Query: 197 YAVDHLSLYQLT 208
               HLS YQLT
Sbjct: 186 LNPPHLSWYQLT 197


>gi|291527556|emb|CBK93142.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium rectale M104/1]
          Length = 543

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 30/335 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    +K   ++++ +   E+ +  Q    + ++SI
Sbjct: 217 DNGYSLYIGIPFCPSTCAYCSFTSYPLGVWKNRVDDYLDALEKEIDYTAQKFYHKKLNSI 276

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  +  ++  I  ++ +   +E T+EA  P S+        +K G++RI
Sbjct: 277 YIGGGTPTTLSPAQLDRLIRKIKCSFDLKDCLEFTVEAGRPDSITKEKLMALKKNGISRI 336

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++Q+L  +GR+H   + I +  LAR   F  ++ DLI  LP++T+      ++
Sbjct: 337 SVNPQTMKQQTLDIIGRHHTVDDTIQSFKLARELGFDNINMDLIMGLPEETLDDVRHTME 396

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                A D+++++ L +++    T+F   + D  +V   E++ +      Q     + L+
Sbjct: 397 LVKELAPDNVTIHSLAVKRAARLTIFKDRYSDMQMVNTQEHMDLCAAYCKQMGLEPYYLY 456

Query: 250 A-------YEISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV-A 294
                    E   ++  G   ++N+        I   G GA ++         G+HR+  
Sbjct: 457 RQKGMAGNMENVGYAAKGKAGVYNILIMEEKQTIVACGAGASTKRVWPVPNPDGTHRIDR 516

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
               K    ++  +          E +  +Q+  E
Sbjct: 517 CENVKDVGQYIARID---------EMIERKQRLFE 542


>gi|296133429|ref|YP_003640676.1| Coproporphyrinogen dehydrogenase [Thermincola sp. JR]
 gi|296032007|gb|ADG82775.1| Coproporphyrinogen dehydrogenase [Thermincola potens JR]
          Length = 500

 Score =  219 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 147/317 (46%), Gaps = 22/317 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT--GPRS 70
           +   ++ +YV  PFC  +C YC F ++ V +Y      F+ +   E+  +          
Sbjct: 164 EAEQTVSLYVGIPFCPTRCAYCSFPAYPVSKYAGMIAPFVVALKKEIAGIAGFLRAEGWQ 223

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           + +I+ GGGTP+ +E + ++ +L+ + K    ++  EIT+EA  P ++        RK G
Sbjct: 224 VQTIYLGGGTPTALEEKILSELLESLDKAIPFTTVREITLEAGRPDTLTREKLAVSRKLG 283

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V R+S+  QS+  ++L  +GR H   +  +A  +AR   F  ++ D+I  LP +T    E
Sbjct: 284 VTRLSINPQSMNPRTLNNIGRLHTPEDIESAFKMARQAGFNNINMDIIIGLPGETAPDVE 343

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L +    A ++L+++ L +++ +   +  +  +  LP E     +  +T+  T   G+
Sbjct: 344 NTLLKIEPLAPENLTVHTLAVKRASQIRENRERYE--LPEETEITKMLAITEEYTEKWGM 401

Query: 249 HAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAI 295
           H Y            E   ++  G + ++N+         IG+G GA S+    +     
Sbjct: 402 HPYYLYRQKYMVGPTENRGYAVEGYDCIYNIQVIEERQTIIGLGAGAGSKFVNPADWTLT 461

Query: 296 S--IEKHPESWLKMVRK 310
           +    K PE+++  V +
Sbjct: 462 NLYNPKDPEAYINRVDE 478


>gi|323703392|ref|ZP_08115041.1| Coproporphyrinogen dehydrogenase [Desulfotomaculum nigrificans DSM
           574]
 gi|323531661|gb|EGB21551.1| Coproporphyrinogen dehydrogenase [Desulfotomaculum nigrificans DSM
           574]
          Length = 491

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 141/320 (44%), Gaps = 21/320 (6%)

Query: 11  MTGQGSNSL-GVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG- 67
           ++ + +  L  VY+  PFC  +C YC F S+ ++R++   E F++S L E++ + +    
Sbjct: 158 LSREQARHLVAVYIGIPFCPSRCLYCSFPSYSIKRHRNMVEPFMKSLLEEIKLVGEALQA 217

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
               + +I+ GGGTP+ +    +  +L+ +          E T+E   P ++  +     
Sbjct: 218 HGLKVQTIYLGGGTPTSLNLDQLRCLLEAVQSYLKQPDTREFTVEGGRPDTLNQDVLGLL 277

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
            + GV R+S+  QS+ +Q+L  +GR H   +   A+ LAR   FP ++ DLI  LP +T 
Sbjct: 278 AQYGVTRLSINPQSMNQQTLEAIGRAHTVEDVYRAVELARQFNFPTLNMDLIIGLPGETT 337

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ--SI 242
                 + R +    ++L+++ L +++ +   K   D      ++          Q    
Sbjct: 338 RDVSQTVARIVKLKPENLTVHALALKRASDL-KQRLDQFPPATADEAVAMWQETAQGARK 396

Query: 243 TSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHR 292
              H  + Y         E   ++  G E ++N+         IG+G GA S+       
Sbjct: 397 LEMHPYYMYRQKQMVGNLENIGYTLPGHECIYNIQMIEERQTIIGLGVGAGSKWVNPDTW 456

Query: 293 VAIS--IEKHPESWLKMVRK 310
             I+    K P  +++ + +
Sbjct: 457 NLINEYNAKEPRQYMERLAE 476


>gi|145501693|ref|XP_001436827.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403971|emb|CAK69430.1| unnamed protein product [Paramecium tetraurelia]
          Length = 375

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 105/384 (27%), Positives = 178/384 (46%), Gaps = 28/384 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTE-----MQWMRQLTGPRSIS 72
           +  Y+H PFC+K+C YC F  H+  + +V Q ++ QS   +     ++ +++      + 
Sbjct: 1   MSAYIHIPFCLKRCFYCAFPVHIVGQTEVNQNHYKQSLEKQYVEYLIKDIQKHYKGEPLK 60

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           +I+FGGGTP           L  I   +   SN EITIEA+P +   +  QG++  G+NR
Sbjct: 61  TIYFGGGTP----SLLSLESLQLILNCFKKQSNAEITIEADPKTFNEDKLQGFKTLGLNR 116

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI---FPRMSFDLIYALPKQTMTQWEM 189
           +S+GVQSL++++L+ L R+H   +   A+ L   +   F   SFD +Y LP +       
Sbjct: 117 LSVGVQSLQDETLKRLNRSHLRKDIDDALGLIYKVYGSFDNCSFDFLYNLPSEVGQSSLE 176

Query: 190 ELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           +L+  +  Y   H+S Y L+IE+ + FYK     + + P  N  +   N T+   +    
Sbjct: 177 DLKWFIEQYQPGHISAYSLSIEEESYFYKNLNYREGIHPLPNNEIQTCNYTKVHQTLQQY 236

Query: 249 HAYEISNHSF-LGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
             YEISN +      S HN NYW    ++ G G GA S   +    + ++  K  + + +
Sbjct: 237 DHYEISNFAKSEKHISQHNKNYWLGDSNFYGFGMGATSLSNL----IRVTRPKTLKQYYR 292

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
            V      +VE E  +  ++    LM  LR + GI              IE  +  + + 
Sbjct: 293 FVDSGEGCLVEDES-TQFEKQRILLMSRLRTKWGIERSLLSQS-----LIEAMKRFE-EY 345

Query: 367 FIERVQFSRLRCTQRGMTMLDSVI 390
            I      +L+    G  + D ++
Sbjct: 346 LIIGEDNIKLKI-PEGYLVCDEIV 368


>gi|291522834|emb|CBK81127.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Coprococcus catus GD/7]
          Length = 484

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 144/326 (44%), Gaps = 22/326 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            ++  +YV  PFC   C YC F+S+    ++   ++++ +   E++    + G + + + 
Sbjct: 156 DHTFSLYVGIPFCPSICAYCSFSSYPLSVWEKQVDSYLDALCKEIEAASTMMGNKKLLTF 215

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  + + + ++   E T+EA  P S+  +  +  RK  ++RI
Sbjct: 216 YMGGGTPTSLSAAQMDRLLTCLEQYFDLAHVSEKTVEAGRPDSITEDKLKVLRKHHIDRI 275

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   E   A H+AR   F  ++ DLI  LP +T    +  + 
Sbjct: 276 SINPQTMNQETLDLIGRRHTTEEVKQAFHMAREAGFMNINMDLIAGLPGETSEHMQRTMD 335

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             +  A D ++++ L +++         +         N  + + +       A   + Y
Sbjct: 336 AIVDLAPDSVTVHSLALKRAAFLNQNREQFPVAGADEVNRMIGISHEGALAIEAEPYYLY 395

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--------KVGSHRV 293
                    E   ++  G E L+N+         + +G GA S+         ++     
Sbjct: 396 RQKNIAGNLENVGYARKGCEGLYNILIMEEKQTILALGAGASSKFVFHNEHGHRIERVEN 455

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKE 319
             S++ + E   +M+ +  + +++ E
Sbjct: 456 VKSVKDYIERIDEMIDRKKNFLLKSE 481


>gi|312883716|ref|ZP_07743438.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368620|gb|EFP96150.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 381

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 142/367 (38%), Gaps = 25/367 (6%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
           R+    + ++ +   E++    L   R ++ + FGGGTP+ +    I+ ++  +   +  
Sbjct: 1   RHSHKADEYLDALELEVRTRAALLQGRKVNQLHFGGGTPTFLSQAQISRLMSVLRHEFDF 60

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
             + E++IE +P  + +      R+ G NR+S+GVQ   +   + + R  + +   A + 
Sbjct: 61  DLDAELSIEIDPRDLPIAKIDHLRREGFNRLSIGVQDFNKDVQKAVNREQDEAHITALVK 120

Query: 163 LARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            A ++ F   + DLIY LPKQ+   +   +++ L    + +S++        LF    K 
Sbjct: 121 RAEDLNFRSTNLDLIYGLPKQSADSFAQTVKKVLEMKPERISVFNYAHMPE-LFAAQRKI 179

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYG- 273
               LPS    + +   T    +  G  A  + + +           +   + N+  Y  
Sbjct: 180 HQQDLPSIEQKMAMLQDTLITLTQRGYQAIGMDHFALPNDELAIAQRQGKLHRNFQGYTT 239

Query: 274 ----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
               D IG G  A S +      V     K  + + + V    HA+ +   L S+     
Sbjct: 240 QGECDLIGFGVSAISMIGD----VYAQNHKQLKEYYQQVEDQRHALYKGLTLDSDDLLRR 295

Query: 330 FLMMGLRLREGISVKDWEMLAGR------NLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
            ++  L     + +   E            LD+           +  ++ + +  T RG 
Sbjct: 296 DIIKQLMCNFTLDMGSIERRYDVCFAQYFQLDLALLAPFIEDKLVS-IESNIITVTARGR 354

Query: 384 TMLDSVI 390
            ++ ++ 
Sbjct: 355 LLIRNIC 361


>gi|260437934|ref|ZP_05791750.1| oxygen-independent coproporphyrinogen III oxidase 2 [Butyrivibrio
           crossotus DSM 2876]
 gi|292809685|gb|EFF68890.1| oxygen-independent coproporphyrinogen III oxidase 2 [Butyrivibrio
           crossotus DSM 2876]
          Length = 478

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 145/325 (44%), Gaps = 18/325 (5%)

Query: 4   LSAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ 60
           ++A EN +  T    N   +Y+  PFC   C YC F S+ +  +K   ++++ +   E++
Sbjct: 142 VAANENELLKTLDYKNGYSLYIGIPFCPTTCLYCSFTSYPISMWKDKVDSYLDALFKELK 201

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
           ++ +    R   SI+ GGGTP+ + P     + D +   +  S+  E T+EA  P S++ 
Sbjct: 202 YLSEHLRGRRPDSIYIGGGTPTTLLPYQFERLFDFLESCFDYSNLKEFTVEAGRPDSIDR 261

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +  +  +K G+ RIS+  Q++ +++L  +GR H   +      +AR+  F  ++ D+I  
Sbjct: 262 DKLEVIKKHGIGRISINPQTMNQKTLDLIGRRHTVEQICDTFKMARDCGFDNINMDMIVG 321

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYN 237
           LP +        L++ +  + D+L+++ L I++     Y      D  + + +  + +  
Sbjct: 322 LPGEDKEDVRNTLEQIMKLSPDNLTVHSLAIKRAARLNYMKEAYADYRIDNTDEIITMTK 381

Query: 238 LTQSITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV- 286
               +      + Y         E   ++  G + ++N+            G GA S++ 
Sbjct: 382 EYADMMGMTPYYLYRQKNMAGNFENVGYAKEGKKGVYNILIMEEKQSIYAAGAGAQSKIV 441

Query: 287 -KVGSHRVAISIEKHPESWLKMVRK 310
               +    I   K   ++++ V +
Sbjct: 442 FPDENRVERIENVKDVSNYIERVDE 466


>gi|326201902|ref|ZP_08191772.1| Coproporphyrinogen dehydrogenase [Clostridium papyrosolvens DSM
           2782]
 gi|325987697|gb|EGD48523.1| Coproporphyrinogen dehydrogenase [Clostridium papyrosolvens DSM
           2782]
          Length = 497

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 76/330 (23%), Positives = 158/330 (47%), Gaps = 24/330 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           T    NS+ +YV  PFC  +C YC F+S  + +YK     ++ + L E++   QL   + 
Sbjct: 165 TESRENSISLYVGIPFCPTRCLYCSFSSSTISQYKKMVGVYVDTLLKEIRHTAQLMREKG 224

Query: 71  --ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             + SI+ GGGTP+ +  + ++ +L GI +   ++   E T+EA  P ++ +   +  + 
Sbjct: 225 LVVESIYIGGGTPTSLNERQLSRLLSGIEECIDMTYLREYTLEAGRPDTITIEKLKVIKN 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQ 186
           + V+RIS+  Q++ E++L  +GR H   + + A   +R+  F  ++ DLI  LP + +  
Sbjct: 285 SRVSRISINPQTMNEKTLERIGRFHTPEDVVNAFKASRDMGFDNINMDLICGLPGEDVEM 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L++      D L+++ + I++ +   K  +   L     + A+ + ++ +  +   
Sbjct: 345 FGETLRKIKELNPDSLTVHTMAIKRASQLTKEIEKYSLKTQYVDSALMV-DMARECSKEM 403

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHR- 292
            L+ Y            E   +S +G E L+N+         +  G GA ++V    +R 
Sbjct: 404 SLNPYYLYRQKNILGNLENVGYSKIGMECLYNIQIMEERQTILACGAGAVTKVVFPMNRL 463

Query: 293 ----VAISIEKHPESWLKMVRKNGHAVVEK 318
                  S+E++     +M+ +  + ++E+
Sbjct: 464 ERSFNVKSVEEYIGRIDEMLERKANILMEE 493


>gi|126735823|ref|ZP_01751568.1| coproporphyrinogen III oxidase [Roseobacter sp. CCS2]
 gi|126715010|gb|EBA11876.1| coproporphyrinogen III oxidase [Roseobacter sp. CCS2]
          Length = 449

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 74/388 (19%), Positives = 142/388 (36%), Gaps = 22/388 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSIS 72
             +  + VY+H PFC + C +C   +          N+++    E++ +R  L    ++ 
Sbjct: 46  DPATPVSVYIHIPFCERLCWFCACRTQGTTTLEPVVNYLRVVKKELELLRATLPAGVTMG 105

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + +GGGTP+++ P  I  +   +      +     ++E +P+ V+        + G+ R
Sbjct: 106 QMHWGGGTPTILPPDMIRELAQAVKDVIPPAPAFSFSVEIDPTLVDDGKIAALAEMGMTR 165

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            S+G+Q         +GR  +     A +  L       ++ DL+Y LP QT  +    +
Sbjct: 166 ASIGIQDFALDVQDAIGRKQSFGATRACVDSLRAAGITSLNADLVYGLPHQTPAKLANTI 225

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +  +   D ++L+       T   +        LP E     L        +  G  A 
Sbjct: 226 AKVRALDPDRIALFGYAHVP-TFSKRQKLIPSNALPGEEDRYHLARQAAHAFTGSGYQAI 284

Query: 252 EISNHSFL------GAESLH-NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            I +           A + H   N+  Y D      IGIG  + S+   G  + A +   
Sbjct: 285 GIDHFGKPEDSLTIAANTGHLRRNFQGYTDDTCPSLIGIGASSISQFAQGYVQNASAT-- 342

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDIEC 358
              ++L+ V  +  A      + +E +     +  L     I +   +     R+L    
Sbjct: 343 --AAYLERVEADKLAAHRGYQMKTEDKLRASAINMLMCDFEIDLHKLDAFPNARDLLPIH 400

Query: 359 ERNLQR-QGFIERVQFSRLRCTQRGMTM 385
              L+   G++       LR T  G  +
Sbjct: 401 AAILEDFAGYVVATGNG-LRITPAGRPL 427


>gi|218514269|ref|ZP_03511109.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 409

 Score =  219 bits (557), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 71/390 (18%), Positives = 150/390 (38%), Gaps = 23/390 (5%)

Query: 5   SAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
             YE  +  QG  +++ +Y+H PFC   C YC F + + R      +++     E++ + 
Sbjct: 26  HTYEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVA 85

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            Q+    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  
Sbjct: 86  EQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMA 145

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           +   + GVNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP 
Sbjct: 146 EALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPN 205

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+         A++   D L+++  +    +            LP      +  +    
Sbjct: 206 QTVQSCLESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAARAEQASAMAD 264

Query: 242 ITSAHGLHAYEISNHSFLGAE----------SLHNLNY--WRYGDYIGIGPGAHSRVKVG 289
              A G     + + +    E            ++L Y        IG+G  A  R   G
Sbjct: 265 TLVAAGYLQIGLDHFALPDDELAIAQRAGRLRRNSLGYSAETCSTVIGLGASAIGRCGDG 324

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +  ++       + + +     A+     L++E +    ++  L       +      
Sbjct: 325 YVQNDLT----QSCYNRHIASGRLAISRGYRLATEDRVRAAIIEQLMCYLEADISAI--C 378

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCT 379
             R  D     +  +Q  I   +   L  T
Sbjct: 379 TARGFDQTHLVSSAKQLEI-LAEMGSLSLT 407


>gi|331002006|ref|ZP_08325526.1| hypothetical protein HMPREF0491_00388 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411802|gb|EGG91207.1| hypothetical protein HMPREF0491_00388 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 474

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 149/312 (47%), Gaps = 20/312 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC  +C YC F S+ + ++K   + +I+S   E+  + ++   + + ++
Sbjct: 154 KEGYSLYIGIPFCPTRCLYCSFTSYSISQWKKDTDIYIESLCKELIAVSKMYAGKKLQTV 213

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +A IL+ + +N+ +S+ +E+T+EA    S+     +  +  GV+RI
Sbjct: 214 YMGGGTPTSLEAYQLAKILNVVKENFDLSNLLELTVEAGRADSITREKLEALKATGVDRI 273

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR+H+  +   +  LAR I F  ++ D I  L  + +        
Sbjct: 274 SINPQTMQQKTLDLIGRHHSVEDIYESFSLAREIGFENINMDFIIGLNGENLDDVIDSFT 333

Query: 193 RALSYAVDHLSLYQLTIEK----GTLFYKMHKDGDLVL--------PSENVAVDLYNLTQ 240
           +   +A + ++++ L +++     T   +   D  L+L           ++ ++ Y L +
Sbjct: 334 KVREFAPESITIHSLALKRAARLNTENKREIMDNSLILSMINTAIDTCIDLGLNPYYLYR 393

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-AISIE 298
                +     E    S    E L+N+         I  G G  S++  G  R+  I   
Sbjct: 394 Q---KNMAGNLENIGFSKPHKECLYNILIMEEKQTIIACGAGTSSKIVFGDGRIERIENV 450

Query: 299 KHPESWLKMVRK 310
           K P+ +++ + +
Sbjct: 451 KDPKLYIERLDE 462


>gi|190894265|ref|YP_001984559.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
 gi|190699926|gb|ACE94009.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CIAT 652]
          Length = 464

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 151/393 (38%), Gaps = 24/393 (6%)

Query: 5   SAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
             YE  +  QG  +++ +Y+H PFC   C YC F + + R      +++     E++ + 
Sbjct: 53  HTYEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVA 112

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            Q+    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  
Sbjct: 113 EQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMA 172

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
           +   + GVNR S+GVQS +    + + R  + ++ + A+  L  +   R++FDL++ LP 
Sbjct: 173 EALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLHGVRRINFDLMFGLPN 232

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+         A++   D L+++  +    +            LP      +  +    
Sbjct: 233 QTVQSCLESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAARAEQASAMAD 291

Query: 242 ITSAHGLHAYEISNHSFL----------GAESLHNLNY--WRYGDYIGIGPGAHSRVKVG 289
              A G     + + +            G    ++L Y        IG+G  A  R   G
Sbjct: 292 TLVAAGYLQIGLDHFALPDDELAIAQRAGRLRRNSLGYSAETCSTVIGLGASAIGRCGDG 351

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW--E 347
             +  ++       + + +     A+     L++E +    ++  L       +      
Sbjct: 352 YVQNDLT----QSCYNRHIASGRLAISRGYRLATEDRVRAAIIEQLMCYLEADISAICTA 407

Query: 348 MLAGRNLDIECERNLQ--RQGFIERVQFSRLRC 378
               +   +   + L+   +  I       +R 
Sbjct: 408 QGFDQTHLVSSAKQLEILAEDGIVEFDNGLVRV 440


>gi|238922251|ref|YP_002935765.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
 gi|238873923|gb|ACR73631.1| oxygen-independent coproporphyrinogen III oxidase [Eubacterium
           eligens ATCC 27750]
          Length = 471

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 144/331 (43%), Gaps = 26/331 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC   C YC F+S+    YK   +N++ + + E++++ +    R + ++
Sbjct: 141 KTGYSLYIGIPFCPSICLYCSFSSYALGAYKDYVDNYVDALIKEIRFVAETMKGRRLDTV 200

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  + + + +S   E+T+EA  P SV  + F+  +   V RI
Sbjct: 201 YMGGGTPTTLSAAQLDKVLTVVEEAFDLSRCRELTVEAGRPDSVTPDKFKVLKAHNVGRI 260

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +   A  +AR      ++ D+I  LP + + +    L 
Sbjct: 261 SINPQTMNQKTLDLIGRKHTVEDIKNAYAMAREAGLDNINMDMILGLPGEGVDEVYHTLN 320

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              +   + L+++ L I++ +    + +   +L + + +  + +   T    +    + Y
Sbjct: 321 EIKAMRPESLTVHSLAIKRASRLNILRQQYTELSIENTDSIIAMTEQTARDLNMQPYYMY 380

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR------------VKVG 289
                    E   ++  G E ++N+         I  G GA ++            V++ 
Sbjct: 381 RQKNMAGNFENVGYAVAGLECIYNILIMEEKQTIIACGAGASTKVVFHNEGDENHSVRIE 440

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
                  +  + E   +M+ +      E EF
Sbjct: 441 RIENVKDVRSYVERIDEMIERKRKFFGENEF 471


>gi|290969021|ref|ZP_06560556.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290780977|gb|EFD93570.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 559

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 171/376 (45%), Gaps = 27/376 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F  +    +  ++ +I + + E++   +        I ++F GGG
Sbjct: 72  YIHIPFCKTKCLYCGFFQN-GTDQAVEDQYIDALIKELEAAAVAPRLKDSLIHAVFIGGG 130

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P+N+A +L  I +   ++++ E+T+E     V   N + +   GVNR+SLGVQS
Sbjct: 131 TPTSLSPRNMARLLQAIQRCLPLANDYELTLEGRIHDVVPENMEVWFANGVNRVSLGVQS 190

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYA 198
              +  R +GR  +    +  +    +     +  DLIY LP Q +  W+ +L   ++  
Sbjct: 191 FHTEIRRNVGRLDDQETVLKHLENLCSYNQSANVIDLIYGLPGQDLDIWKEDLDLLMASG 250

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           VD   LYQL +  G+   K  + G L    +      +++  ++  + HG     I + S
Sbjct: 251 VDGCDLYQLNVFDGSDLNKAIQAGRLPAAATTEYQSAMFSFGKNYLAQHGYKRLNICHWS 310

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E SL+N            G GA   V   S  +   I+ + E++++M +K   A++
Sbjct: 311 CTNRERSLYNTLARSAAPMFPFGSGAGGHVDGYSTMLHRIIQPY-EAYVQMGKKPFMALM 369

Query: 317 EKEFLSS--EQQADEFLMMGLRLREGIS----VKDWEMLAGRNLDIECERNLQRQGFIER 370
           ++  L    E+   +F M  + L+  I+    +KD + +             Q++G +  
Sbjct: 370 KQSPLEPIVEEVQAQFEMGAVNLQTIIAFDARLKDLQWVFDL---------WQKRGLL-- 418

Query: 371 VQFSRLR--CTQRGMT 384
             F+ ++   T+ G  
Sbjct: 419 -AFNGIQYELTEAGQF 433


>gi|89255377|ref|NP_659778.2| coproporphyrinogen III oxidase [Rhizobium etli CFN 42]
 gi|89213331|gb|AAM54792.2| coproporphyrinogen III oxidase protein [Rhizobium etli CFN 42]
          Length = 464

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/389 (17%), Positives = 148/389 (38%), Gaps = 25/389 (6%)

Query: 5   SAYENNMTGQG-SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
             YE  +  QG  +++ +Y+H PFC   C YC F + + R      +++     E++ + 
Sbjct: 53  HTYEQWLRSQGTDDAVSLYLHIPFCRSMCWYCGFPTSITRRDTLITDYLAMLREEIRLVA 112

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            Q+    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  
Sbjct: 113 EQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMA 172

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
           +   + GVNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP 
Sbjct: 173 EALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPN 232

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+         A++   D L+++  +    +            LP      +  +    
Sbjct: 233 QTVQSCLESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAARAEQASAMAD 291

Query: 242 ITSAHGLHAYEISNHSFL----------GAESLHNLNY--WRYGDYIGIGPGAHSRVKVG 289
              A G     + + +            G    ++L Y        IG+G  A  R   G
Sbjct: 292 TLVAAGYLQIGLDHFALPDDELAIAQRAGRLRRNSLGYSAETCSTVIGLGASAIGRCGDG 351

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +  ++       + + +     A+     L++E +    ++  L       +      
Sbjct: 352 YVQNDLT----QSCYNRHIASGRLAISRGYRLATEDRVRAAIIEQLMCYLEADISAICTA 407

Query: 350 AGRNL-----DIECERNLQRQGFIERVQF 373
            G +        +    L   G +E    
Sbjct: 408 QGFDQTHLVSSAKQLEILAEDGIVEFDNG 436


>gi|260886614|ref|ZP_05897877.1| HutW protein [Selenomonas sputigena ATCC 35185]
 gi|330839552|ref|YP_004414132.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260863757|gb|EEX78257.1| HutW protein [Selenomonas sputigena ATCC 35185]
 gi|329747316|gb|AEC00673.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 541

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/303 (22%), Positives = 135/303 (44%), Gaps = 10/303 (3%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFG 77
             Y+H PFC  KC YC F  +   ++  +++++++ + E++            I ++F G
Sbjct: 72  AAYIHIPFCKTKCLYCGFFQNAA-HQSAEDDYVEALIEEIEASADAPRLKGGLIHAVFIG 130

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +  +N A +L  + +   ++++ E+T+E     +     + +   GVNRISLGV
Sbjct: 131 GGTPTSLSAENAARVLSTLRRVLPLANDYELTLEGRIHDLVPEKIEAWLANGVNRISLGV 190

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + +  +  GR  +  E +  + L ++     +  DLI+ LP Q+M  W+ +L   ++
Sbjct: 191 QSFDTKVRQSQGRIESREEVLERLKLLKSYEQCSVVLDLIFGLPGQSMEVWQQDLDDLIA 250

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +D    YQL + +G+   K   +G L    +      +Y          G     + +
Sbjct: 251 SGIDGADFYQLNVFEGSDLNKRIAEGKLDPAATTKEQAKMYAFAHDYMKKRGWRQLSMCH 310

Query: 256 HSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            +    E SL+N    +       G  A   ++      A+ + +  + +  +V  N   
Sbjct: 311 WASSNRERSLYNALAKKGVPMFPFGSSAGGFLEG----YAVMLHRVLQPYAMLVASNQKP 366

Query: 315 VVE 317
           ++ 
Sbjct: 367 IMG 369


>gi|325473187|gb|EGC76383.1| oxygen-independent coproporphyrinogen III oxidase [Treponema
           denticola F0402]
          Length = 422

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 169/402 (42%), Gaps = 25/402 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           M+ L    +    Q      +Y+H P+C K C +C   S  R      +++    + +++
Sbjct: 32  MRSLEKALSEPNTQNGKK-SIYIHVPYCKKICNFC---SMRRTINPVPDDYAALVIRQIE 87

Query: 61  WMR--QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                +     +I+S++FGGGTP+ +  + +A IL  + KN+ ++ + EI++E   S ++
Sbjct: 88  NYGKTEYVKTSNINSVYFGGGTPTTLPAKQLAEILKALQKNFNIAKDAEISMETTVSELD 147

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +   + G+NRIS G+Q+  ++  + LGR  N   A   +  A    F  ++ D+IY
Sbjct: 148 DEKLKILFENGLNRISAGIQTFNDEGRKTLGRIGNGENAENFLRRAFKTGFKNVNIDIIY 207

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T    + +L +A +  +   S Y L +   +   +     +    + +   + + 
Sbjct: 208 NYPGETKEILKEDLHKAFALDIAGFSFYSLIVMDTSKIGRSVDKEEYAEKTLHQDAEFFL 267

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGSHRV 293
                +   G    EI+     G +   N  Y R     GD   +G GA   V   +   
Sbjct: 268 TILEESRKAGYDFLEITKLVKPGRD---NYEYIRSGHLGGDIFPVGAGAGGFVNNTAVMN 324

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGR 352
            +  EK  +        NG       ++S + ++   F     +L+EG+    +      
Sbjct: 325 PLDKEKFADQI------NGFDKTSGMWISEDYRRIKRF---SGQLQEGLLDLSFLTKEES 375

Query: 353 NLDIECERNLQRQGFIERVQFSR-LRCTQRGMTMLDSVIANL 393
           +   +    L+++  I++ + S+  + T +G    +S+ A L
Sbjct: 376 DKIYDMLTGLEKETLIKKDEGSKNYKFTDKGFFWGNSLAAEL 417


>gi|261878826|ref|ZP_06005253.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           bergensis DSM 17361]
 gi|270334567|gb|EFA45353.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           bergensis DSM 17361]
          Length = 453

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/416 (19%), Positives = 165/416 (39%), Gaps = 31/416 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ 60
           +Y+ A + +    GS  L  Y+H PFC   C YC  NS+ + R     + ++++   E+ 
Sbjct: 30  RYIEAVDESNH-TGSPMLSFYLHMPFCRHLCHYCGCNSYLMPRTGDAVDRYVKALHREID 88

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            +   L   R I+ I +GGG+P+ +    +  + + +   +      EI IE +P  + +
Sbjct: 89  LVAAHLDRHRPIAQIHYGGGSPTAMPVGVLRELNEHLLSLFPTIDRPEIAIECHPGYLTL 148

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            ++Q   ++  NR S+GVQ ++E+ L+ + R  +       + L       ++ DL++ L
Sbjct: 149 EDWQQLTESHFNRFSIGVQDMDERVLKTVNRTPSLLPLQQIVDLLHVAGATVNMDLLFGL 208

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT   +   ++RA++   + L  +        +F +      + LP  +    +++  
Sbjct: 209 PYQTAGSFVESIRRAIAIRPERLVTFSYGHVP-WVFKRQQILEKIGLPPTDEKRRMFDEA 267

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY------GDYIGIGPGAHSRV 286
             +    G  +  + +             E L   N+  Y      G     G    S++
Sbjct: 268 SRLLHEAGYRSIGLDHFVLPNDELFTALQEGLLYRNFQGYCTRRTTGQVYAFGATGISQL 327

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA----DEFLMMGLRLREG-- 340
                       K  E +++       +  +   L+ +Q+      E LM   R+R    
Sbjct: 328 DT----FYAQNTKDIEGYIRDTMSGRLSTAKGYHLTPQQRICKEVIERLMCNYRIRWSEL 383

Query: 341 ---ISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              ++V    + +  + D    +++ R G I  +    +  T  G   + +V A L
Sbjct: 384 ADTLAVDHDTLFSAIHYDPAQLQDMARDG-IINLSNDGIAMTDLGHPFVRNVAAAL 438


>gi|218132938|ref|ZP_03461742.1| hypothetical protein BACPEC_00799 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991811|gb|EEC57815.1| hypothetical protein BACPEC_00799 [Bacteroides pectinophilus ATCC
           43243]
          Length = 469

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 68/313 (21%), Positives = 134/313 (42%), Gaps = 19/313 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           N   +Y+  PFC   C YC F S+ + ++    E ++ +   EM+++      R + +I+
Sbjct: 141 NGYSLYIGIPFCPTTCLYCSFTSYSIDKWHDRVEEYLSALFCEMEFVAAKLKNRRLDTIY 200

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ +    +  +L  + K + +S  VE+T+EA  P S+ ++  +  +   V RIS
Sbjct: 201 FGGGTPTTLSADQLDRLLGHMEKCFDMSDIVELTVEAGRPDSLTIDKLKVLKAHNVGRIS 260

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ + +L  +GR H   +   A  +A       ++ DLI  LP +        L  
Sbjct: 261 INPQTMNQATLDIIGRKHTVEQVKEAFAMAHECGLDNINVDLIMGLPGEDEAMIHHTLDE 320

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAY- 251
               A   L+++ L I++               L + +  +D      +       + Y 
Sbjct: 321 VKKLAPTSLTVHSLAIKRAAALNIWRDKYQAYALNNTDEIIDAAAACAADMGMEPYYMYR 380

Query: 252 --------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV----KVGSHRV-AISI 297
                   E   +S  G E ++N+         + +G GA +++      GS R+  I  
Sbjct: 381 QKNMAGNFENVGYSVPGLECIYNILIMEEKQSIVALGAGASTKIVMPQDDGSVRIERIEN 440

Query: 298 EKHPESWLKMVRK 310
            K  + +++ + +
Sbjct: 441 VKSVKDYIERIDE 453


>gi|42526686|ref|NP_971784.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
 gi|41817001|gb|AAS11695.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Treponema denticola ATCC 35405]
          Length = 422

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 169/402 (42%), Gaps = 25/402 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           M+ L    +    Q      +Y+H P+C K C +C   S  R      +++    + +++
Sbjct: 32  MRSLEKALSEPNTQNGKK-SIYIHVPYCKKICNFC---SMRRTINPVPDDYAALVIRQIE 87

Query: 61  WMR--QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
                +     +I+S++FGGGTP+ +  + +A IL  + KN+ ++ + EI++E   S ++
Sbjct: 88  NYGKTEYVKTSNINSVYFGGGTPTTLPAKQLAEILKALQKNFNIAKDAEISMETTVSELD 147

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               +   + G+NRIS G+Q+  ++  + LGR  N   A   +  A    F  ++ D+IY
Sbjct: 148 DEKLKILFENGLNRISAGIQTFNDEGRKTLGRIGNGENAENFLRRAFKTGFKNVNIDIIY 207

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T    + +L +A +  +   S Y L +   +   +     +    + +   + + 
Sbjct: 208 NYPGETKEILKDDLHKAFALDIAGFSFYSLIVMDTSKIGRSVDKEEYAEKTLHQDAEFFL 267

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGSHRV 293
                +   G    EI+     G +   N  Y R     GD   +G GA   V   +   
Sbjct: 268 TILEESRKAGYDFLEITKLVKPGRD---NYEYIRSGHLGGDIFPVGAGAGGFVNNTAVMN 324

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGR 352
            +  EK  +        NG       ++S + ++   F     +L+EG+    +      
Sbjct: 325 PLDKEKFADQI------NGFDKTSGMWISEDYRRIKRF---SGQLQEGLLDLSFLTKEES 375

Query: 353 NLDIECERNLQRQGFIERVQFSR-LRCTQRGMTMLDSVIANL 393
           +   +    L+++  I++ + S+  + T +G    +S+ A L
Sbjct: 376 DKIYDMLTGLEKETLIKKDEGSKNYKFTDKGFFWGNSLAAEL 417


>gi|126463114|ref|YP_001044228.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104778|gb|ABN77456.1| oxygen-independent coproporphyrinogen III oxidase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 450

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 145/396 (36%), Gaps = 22/396 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISS 73
              S+ +Y+H PFC + C +C   +           +  +  +E+  +R +L     ++ 
Sbjct: 47  AGGSISLYLHVPFCRRLCWFCACRTQGTSSDAPVRAYAAALKSELALLRARLAPGVRLAR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+L+ P  I  +   I       +  + ++E +P+ ++        +AG+ R+
Sbjct: 107 MHWGGGTPTLLPPTLIHELALAIRDAVPSDAETDFSVEIDPTEIDAARLDALFEAGMTRV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +    + +GR  +           R+   R +  D++Y LP QT       +Q
Sbjct: 167 SIGVQDFDPLIQQSIGREQSFELTQRLTEDLRHRGLRGLDADILYGLPHQTAPGVADSIQ 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS + D +++         +  +        +P     +DL+   +++    G     
Sbjct: 227 KLLSLSPDRVAVLGYAHVPA-VSRRQLMIPTASIPGPEERLDLFETARTLILWDGYQQVG 285

Query: 253 ISNHSFLGAESLH-------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +  G    H         ++  Y D      IG+G  A SR   G  + A S   H
Sbjct: 286 LDHFARAGDPLAHAHACGRLRRSFQGYTDDRAEVLIGLGASAISRFPQGFTQNAPSTSDH 345

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIE 357
               L+ +R    +      LS E +    ++  L     IS              L+  
Sbjct: 346 ----LRAIRSGRFSTARGHVLSDEDRLRGRMIEQLLCEFRISRAQILARFAVAPERLETL 401

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                     +  +    L   + G  +   V  + 
Sbjct: 402 FRTCAAAFPGVVEITGHGLEILEEGRPLARIVARSF 437


>gi|166031160|ref|ZP_02233989.1| hypothetical protein DORFOR_00846 [Dorea formicigenerans ATCC
           27755]
 gi|166029007|gb|EDR47764.1| hypothetical protein DORFOR_00846 [Dorea formicigenerans ATCC
           27755]
          Length = 490

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 143/324 (44%), Gaps = 29/324 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F+S     ++   E+++ + + E++ + +++  R   +I
Sbjct: 156 ENGYSLYVGIPFCPTVCSYCSFSSGALGDWEHRVEDYLAALMKELEAIAKISEGRKADTI 215

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  I +++     +E T+EA  P S+     Q  R  G+NRI
Sbjct: 216 YMGGGTPTTLNADQLDRLLTCIDRHFVREGLLEFTVEAGRPDSITKEKLQVLRNHGINRI 275

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+++++L  +GR H   +   A H+AR   F  ++ D+I  LP +T    E  L+
Sbjct: 276 SINPQSMQQKTLDTIGRKHTVEQVYEAFHMARKLGFDNINMDIIAGLPGETPEDMEDTLR 335

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      D+L+++ L I++     +  ++G  +   ++    +  +  +     GL  Y 
Sbjct: 336 QIALLGPDNLTVHSLAIKRAAKMGQEEREGKRLTIIQDEIGTMVEMAGNKARQMGLFPYY 395

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR------- 292
                      E   ++ +    ++N+         I  G GA +++ +           
Sbjct: 396 LYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIIAAGAGASTKIVLKEPVINPESKK 455

Query: 293 ------VAISIEKHPESWLKMVRK 310
                 +     K  ++++  V +
Sbjct: 456 KKKTSLIRQENVKAIDAYISRVDE 479


>gi|134300714|ref|YP_001114210.1| coproporphyrinogen III oxidase [Desulfotomaculum reducens MI-1]
 gi|134053414|gb|ABO51385.1| coproporphyrinogen III oxidase, anaerobic [Desulfotomaculum
           reducens MI-1]
          Length = 494

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/316 (23%), Positives = 151/316 (47%), Gaps = 20/316 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           Q    +GVY+  PFC  +C YC F S+ ++R++   + F+++ L E+Q + +    +   
Sbjct: 164 QAKKLVGVYIGIPFCPSRCLYCSFPSYSIKRHRDMVDPFLKALLQEIQVIGETLRSQGLL 223

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           + SI+ GGGTP+ +  + +  +L+ I  +    S +E+T+E   P ++  + F     AG
Sbjct: 224 VQSIYLGGGTPTSLNCEQLQSLLEAIQLSLKDDSTIEMTVEGGRPDTLNEDVFALLANAG 283

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR+S+  QS+ +++L  +GR H   +   ++  ARN  FP ++ DLI  LP +T+    
Sbjct: 284 VNRLSINPQSMNQKTLDIIGRAHTVEDIYRSVETARNYKFPTLNMDLIIGLPGETVQDVA 343

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ--SITSAH 246
             ++  L    ++L+++ L +++ +   +   +  L L +E          +  +    H
Sbjct: 344 RTMESILQLKPENLTVHALALKRASNLKQRLAEFPL-LQAEEAVAMWQETARGATALGQH 402

Query: 247 GLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAIS 296
             + Y         E   ++  G E ++N+         IG+G GA S+         ++
Sbjct: 403 PYYMYRQKQMVGNLENIGYALPGHECIYNIQMIEERQTIIGLGVGAGSKWMDPDTWTLVN 462

Query: 297 --IEKHPESWLKMVRK 310
               K P  +++ + +
Sbjct: 463 EYNAKDPRQYVERLDE 478


>gi|251771082|gb|EES51666.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum ferrodiazotrophum]
          Length = 417

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 157/376 (41%), Gaps = 11/376 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           GVYV  PFC  +C YC     V         ++ +   E Q +  L    S  S++ GGG
Sbjct: 32  GVYVQVPFCPDRCDYCA--VPVSVSTAMVSRYLAALALEAQKVAGLLADTSPVSLYIGGG 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           +P  +  + +  +L  +A  +      E+T+E+ P  ++V   +  R+    R+SLG++ 
Sbjct: 90  SPLSLPREALLRLLKILAPFFPKGEVPEVTVESRPEDLDVETLEILRRIPGIRLSLGIEG 149

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L  LGR     E +A +   R   P   +S D I      +  +     +  LS 
Sbjct: 150 GSREELDRLGRRSAYLEPLALLRRLRREIPEAAISMDFIVGEETGSEDRLLATARELLSE 209

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +DHLS+Y L +E  T+       G      E  A   +       SA G + YE+SN S
Sbjct: 210 GLDHLSVYPLVVESRTVLALRKSQGQTSESLEEEAAARWVEICRALSAQGWNRYEVSNFS 269

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               +   HN + W+ GDY+GIG GAH        R      +    +++M+     +  
Sbjct: 270 RDPESVCRHNRHVWQGGDYLGIGAGAH----QRRGRKRRENVRSVSEYVRMIEGGLDSYG 325

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE--RVQFS 374
             E LS      E+L   LRL EGIS    +   G +          R   ++  R    
Sbjct: 326 LTESLSENAYDIEYLYGNLRLSEGISAGWLKEKVGDDSYEFLHSEFVRMDVLDQNRTNSQ 385

Query: 375 RLRCTQRGMTMLDSVI 390
           RL    RG ++LDS++
Sbjct: 386 RLVLNDRGFSLLDSLV 401


>gi|317487039|ref|ZP_07945847.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
 gi|316921721|gb|EFV42999.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
          Length = 464

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 83/388 (21%), Positives = 153/388 (39%), Gaps = 23/388 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGG 79
           Y+H PFC   C YC F +   R    +  +  + + E++  R   G     + +++ GGG
Sbjct: 82  YIHVPFCETHCLYCGFYNKAYREDESR-IYADALIQELRLWRGRPGQDAGPVHAVYMGGG 140

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ ++  ++  IL  +     ++++ EIT+E   S+   +  +   + G NR SLGVQS
Sbjct: 141 TPTALQADDLRRILKEVRAVLPLANDCEITVEGRLSNFGPDKMEACFEGGANRFSLGVQS 200

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  + +GR  +    I  + L ++     +  DLIY  P QTM +W  ++  A S  
Sbjct: 201 FDTEIRQAMGRVSDRDTLIRQLQLLQSYDQAAVIVDLIYGFPMQTMERWLADIATAQSLK 260

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +D    YQL + + T   K  + G L       +   ++                IS+ +
Sbjct: 261 LDGADCYQLNVYRNTPLAKAIESGRLPAGADVPMQSAMFAAGVKAMQKGFYRRLSISHWA 320

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL        +  GPGA   +    +      +    +W + VR     + 
Sbjct: 321 RTSRERNLYNLYVKGRAHCLAFGPGAGGNLDGFFYLN----QSDYRAWQEEVRAGRKPIA 376

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL---DIECERNLQRQGFIERVQF 373
                  + +  + +  G+     + +   E   G  L           +R G +ER   
Sbjct: 377 MLFRPFPQGKLFKAIAEGMEQGW-LDMPGLEAAYGIPLGEVWKPVLEQWERAGLVER-DG 434

Query: 374 SRLRCTQRG--------MTMLDSVIANL 393
           + +  T  G          +LD +   L
Sbjct: 435 AFIVLTLAGQFWQVNLSQLLLDYLKRAL 462


>gi|310823526|ref|YP_003955884.1| coproporphyrinogen III oxidase family protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396598|gb|ADO74057.1| Coproporphyrinogen III oxidase family protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 438

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 161/386 (41%), Gaps = 18/386 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +  ++L +Y+H PFC  +C +C+  +     +   E ++ +   E + +++  GP + + 
Sbjct: 42  ERRDALFLYLHVPFCEMRCGFCNLFTAAGPRQDVVEGYLAALGRETRRVKEAIGPATFAR 101

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
              GGGTP+L++   +  + D           N+ +++E +P +  +   Q  R  G +R
Sbjct: 102 AALGGGTPTLLDVAGLHTVFDLAEGVMGADLRNIPVSVEVSPETASLEKLQALRSRGTDR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           +S+GVQS  E  +  + R    ++   A+   R + FP ++ DLIY +  QT+  W   L
Sbjct: 162 VSIGVQSFIEAEVAAVKRPQKTAQVEEALERIRTLDFPTLNIDLIYGMEGQTVESWLFSL 221

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + AL Y+ + + LY L +   T   K  +  D      ++ + LY   +    + G    
Sbjct: 222 RAALRYSPEEIYLYPLYVRPLTFLGKKGRAWD------DLRLSLYRTGRDFLLSQGYTQV 275

Query: 252 EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPESWL 305
            +       A S     Y    D  +G+G GA S      +       +  +     ++ 
Sbjct: 276 SMRMFRARHAPSSDGPVYRCQEDGMVGLGCGARSYTGGVHYSSEYAVGSREVRSIIAAYS 335

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA--GRNLDIECERNLQ 363
           +    +   V     L  +++   ++++ L L +G+ ++ +      G   D      L 
Sbjct: 336 ERTEASFGQVGYGFQLDLDERRRRYMLLSL-LADGVELEAYRERFHSGAWEDFPELAELA 394

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSV 389
             G   R +  R+  T  G+   D +
Sbjct: 395 AHGL-ARREDRRVLLTPAGVERSDLI 419


>gi|238925275|ref|YP_002938792.1| coproporphyrinogen dehydrogenase [Eubacterium rectale ATCC 33656]
 gi|238876951|gb|ACR76658.1| coproporphyrinogen dehydrogenase [Eubacterium rectale ATCC 33656]
          Length = 530

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 146/316 (46%), Gaps = 21/316 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    +K   ++++ +   E+ +  Q    + ++SI
Sbjct: 205 DNGYSLYIGIPFCPSTCAYCSFTSYPLGVWKNRVDDYLDALEKEIDYTAQKFYHKKLNSI 264

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  +  ++  I  ++ +   +E T+EA  P S+        +K G++RI
Sbjct: 265 YIGGGTPTTLSPAQLDRLIRKIKCSFDLKDCLEFTVEAGRPDSITREKLLALKKNGISRI 324

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++Q+L  +GR+H   + I +  LAR   F  ++ DLI  LP++T+      ++
Sbjct: 325 SVNPQTMKQQTLDIIGRHHTVDDTIQSFKLARELGFDNINMDLIIGLPEETLDDVRHTME 384

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                A D+++++ L +++    T+F   + D  +V   E++ +      Q     + L+
Sbjct: 385 LVKDMAPDNVTIHSLAVKRAARLTIFKDRYSDMQMVNTQEHMDLCAAYCKQMGLEPYYLY 444

Query: 250 A-------YEISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV-A 294
                    E   ++  G   ++N+        I   G GA ++         G+HR+  
Sbjct: 445 RQKGMAGNMENVGYAAKGKAGVYNILIMEEKQTIVACGAGASTKRVWPVPNPDGTHRIDR 504

Query: 295 ISIEKHPESWLKMVRK 310
               K    ++  + +
Sbjct: 505 CENVKDVGQYITRIDE 520


>gi|159898365|ref|YP_001544612.1| coproporphyrinogen III oxidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891404|gb|ABX04484.1| Coproporphyrinogen dehydrogenase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 439

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 78/389 (20%), Positives = 157/389 (40%), Gaps = 17/389 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             +  + L +Y+H PFC  +C +C+  +     +   + ++ +   +MQ +    G    
Sbjct: 38  ADEAHDQLFLYLHIPFCEMRCGFCNLFTTTNPNESVVQRYLATLELQMQALHNELGAVQF 97

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGV 130
           S +  GGGTP+ +    +  +     +   V+S  + +++E +P +   +      +AGV
Sbjct: 98  SRMAIGGGTPTYLSASELEQLFSMSQRWLGVNSRAIPLSVETSPHTATADRMAILAQAGV 157

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +R+S+GVQS  +      GR     E   A+   R    P ++ DLIY LP Q++  W  
Sbjct: 158 DRVSIGVQSFLDHEAHAAGRAQRRPEVEQALATVRAAQIPTLNIDLIYGLPNQSVATWLE 217

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+  L +  + L LY L +   T   +     +      ++ ++ Y   +    A G  
Sbjct: 218 SLEIGLQWRPEELYLYPLYVRPLTGLDRRGTGWE-----HDLRLECYRAGRERLLAAGYQ 272

Query: 250 AYEISNH--SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV-----AISIEKHPE 302
              +     +    +S       +    +G+G GA S  +   +       A S+ +  +
Sbjct: 273 QISMRMFRAAHAPDDSQAPRYCCQTDGMLGLGAGARSYTRKLHYSSDYAVGASSVRQIIQ 332

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECER 360
           ++ +    +   V     +SS +Q   F++  L    G+  + +    G ++  D+    
Sbjct: 333 NYNQRSLLDLSQVDYGCVVSSTEQRRRFVIQSLLQVSGLDTQAYRAQFGSDVLADLSQIN 392

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            L   G+ E  Q    + T  G+   D +
Sbjct: 393 ELIEIGWAE-YQHGIYQLTPAGLERSDLI 420


>gi|295091160|emb|CBK77267.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Clostridium cf. saccharolyticum K10]
          Length = 518

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 134/311 (43%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S  + +++     ++ +   EM ++ +    R + ++
Sbjct: 194 ENGYSLYIGIPFCPTTCLYCSFTSFPIGKWQGRTGLYLNALFREMDYVAEKMKGRPLDTV 253

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ + P+++  ILD + + + +    E T+EA  P S+     Q  R  G+ RI
Sbjct: 254 YFGGGTPTSLSPEDLDAILDKVERTFPMDQVKEFTVEAGRPDSITEEKLQVLRNHGITRI 313

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +      LA R  F  ++ DLI  LP++        ++
Sbjct: 314 SINPQTMKQETLDLIGRRHTVEQVKETFRLARRMGFDNINMDLIVGLPEEDEEDVRNTME 373

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDL---VLPSENVAVDLYNLTQS----I 242
           +      D L+++ L I++     +F + + +  +       +  A     +        
Sbjct: 374 QIKELRPDSLTVHSLAIKRAARLNMFRERYGNMKITGTQEMIDMTARYAREMGMEPYYLY 433

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV--AISIEK 299
              +    +E   +S  G   ++N+        I   G G  ++V              K
Sbjct: 434 RQKNMAGNFENVGYSVPGKACIYNILIMEEKQTIMACGAGTTTKVVFPRENRLERAENVK 493

Query: 300 HPESWLKMVRK 310
             E +++ V +
Sbjct: 494 EVEQYIERVDE 504


>gi|157146881|ref|YP_001454200.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157084086|gb|ABV13764.1| hypothetical protein CKO_02656 [Citrobacter koseri ATCC BAA-895]
          Length = 445

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/391 (23%), Positives = 153/391 (39%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +     +  + L E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFEEDHCARYTDALLREIEMEADSTLHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  +++A I+  + +   ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSARDLAKIITTLREKLPLAPDCEITIEGRVLNFDDARVDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   AIA ++ L R     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSKIRKKMARTSDGPTAIAFMNGLVRRDRAAVVCDLLFGLPGQDAALWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  + G   +PS +   DLY        + G      S+ +
Sbjct: 239 GLDGIDLYALNLLPNTPLGKAVESGRTTVPSPSARRDLYLQGCDFMDSAGWRCISNSHWA 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   V       +  +E++  +W + +        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSVNG----YSWMVERNLSTWHETIAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLRLRE-----------GISVKDW---EMLAGRNLDIECERNL 362
                         LMM +R  E           GI        E+       I      
Sbjct: 353 --------------LMMMMRTAERGFQWRHTLQAGIETARVPLDELTPHAEQLIPLLTQW 398

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              G   R   + LR T  G     +++ +L
Sbjct: 399 HNAGL-TRDASTCLRLTNEGRFWASNILQSL 428


>gi|167746628|ref|ZP_02418755.1| hypothetical protein ANACAC_01339 [Anaerostipes caccae DSM 14662]
 gi|317471456|ref|ZP_07930808.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
 gi|167653588|gb|EDR97717.1| hypothetical protein ANACAC_01339 [Anaerostipes caccae DSM 14662]
 gi|316901071|gb|EFV23033.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
          Length = 479

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 16/309 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S+ +  Y+   ++++ + + E+ ++ +    R + S+
Sbjct: 160 ESGYSLYVGIPFCPSTCLYCSFTSYPISAYREYADHYLDALIREIHYIGEQYRDREMISL 219

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P+ +  +   + + +      EIT+EA  P S+         + GV RI
Sbjct: 220 YVGGGTPTTLSPEQLERLFGELKRCFDFGRVREITVEAGRPDSITAEKLSVLSENGVTRI 279

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++   +LR +GRNH A +   + H AR   F  ++ D I  LP + + + E   +
Sbjct: 280 SINPQTMNNDTLRKIGRNHTAEDVADSFHAARKAGFDNINMDTICGLPGEGIRELETTFK 339

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
                  D ++++ L I++     +M         +++  +               + Y 
Sbjct: 340 ALGELEPDSITVHALAIKRSAPLNQMRDQFSCG--ADDEMIRFAQRACFDLGMEPYYMYR 397

Query: 252 --------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRV-AISIEKHP 301
                   E +  S    E L+N+       D I  G GA S++  G   +  +   K  
Sbjct: 398 QKNIPGNFENTGFSLEEKECLYNILIMEELHDIIAAGAGASSKIVGGRRNIQRVENLKDV 457

Query: 302 ESWLKMVRK 310
             + + + +
Sbjct: 458 RQYTERIEE 466


>gi|113972057|ref|YP_735850.1| coproporphyrinogen III oxidase [Shewanella sp. MR-4]
 gi|114049287|ref|YP_739837.1| coproporphyrinogen III oxidase [Shewanella sp. MR-7]
 gi|113886741|gb|ABI40793.1| Radical SAM domain protein [Shewanella sp. MR-4]
 gi|113890729|gb|ABI44780.1| Radical SAM domain protein [Shewanella sp. MR-7]
          Length = 445

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 152/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLEKFGTGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I +       ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNRLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGKMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIITDNGKMM 417


>gi|291286293|ref|YP_003503109.1| oxygen-independent coproporphyrinogen III oxidase [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883453|gb|ADD67153.1| oxygen-independent coproporphyrinogen III oxidase [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 363

 Score =  216 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 166/375 (44%), Gaps = 28/375 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PFC  KC YC F S    Y   Q ++ ++ +++++  ++        +++ GGG
Sbjct: 3   GLYVHLPFCRNKCAYCGFYSETDCYDT-QADYFKALISDLRSRKKHAY----ETLYIGGG 57

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS  + + +A  LD ++         E TIEANP S++    +       +R+S+G QS
Sbjct: 58  TPSTADRKLLASFLDAVSITCRW-DFKESTIEANPESIDKEFCRIVDFYKFSRVSIGCQS 116

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             +  L+ L R H+AS+   +  + R + P   +S D++Y +P          L+  ++ 
Sbjct: 117 TSDDVLQKLTRIHSASDIFHSYDMVRKLCPDTDVSLDMMYDIPGTQFESTYKTLKDLIAL 176

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+S Y  +    T F K            +     + + +      G   YEISN +
Sbjct: 177 NPEHISAYTYSF--DTEFLK----------EGDADATDFMVVRDELENAGYVKYEISNFA 224

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES+HN+NYW  G+Y GIG  A S       R+      +   ++   ++      E
Sbjct: 225 RPGHESMHNINYWMLGEYDGIGSSAWSLSYEDGKRILRGKSDNLPEYIHSPKE----YAE 280

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER---NLQRQGFIERVQFS 374
            E     Q A E ++ GLRL +G+  +         L  +      +L  +  +     S
Sbjct: 281 TEITEPPQTALEEIVFGLRLAKGLDAEKICTNVNAELKEKIYNLFSDLSEKELLS-WDGS 339

Query: 375 RLRCTQRGMTMLDSV 389
            +   +RG  +LDSV
Sbjct: 340 NVSLKKRGELLLDSV 354


>gi|294146491|ref|YP_003559157.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
 gi|292676908|dbj|BAI98425.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           japonicum UT26S]
          Length = 438

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 74/402 (18%), Positives = 144/402 (35%), Gaps = 28/402 (6%)

Query: 4   LSAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L+A  + + G +  ++L +YVH P+C   C YC  N+           +++S   E+  +
Sbjct: 34  LAARLDAVAGVKRDDALSLYVHIPYCHDICWYCGCNTGAANRVQRLAAYVESLEREIATL 93

Query: 63  RQLTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                 R  +  I FGGG+P+ +   +   +L  +   +  + + E+++E +P  ++   
Sbjct: 94  AARLNGRGRVRRIAFGGGSPNSLPLVDFVRLLQQLLLCFE-AHHAELSVELDPRRLDGQW 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
                  GV+R++LGVQ+        +GR         A+   R       FDL+Y LP 
Sbjct: 153 ISTMAAMGVDRVNLGVQTFTPHVQARIGRIQPLDMVERAVGQLRAAGIATGFDLMYGLPG 212

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT       L+ A++     ++L+        L  +  +     LP       +      
Sbjct: 213 QTQDDLAATLEAAIAMRPARIALFGYAHMPR-LLPRQRRIDAGDLPDLATRFAMAARGHE 271

Query: 242 ITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
             +  G  A    + +           E     N+  + D      +G+G  A S+    
Sbjct: 272 TLTGAGYEAIGFDHFALPEDAMARAAREGRLRRNFQGFTDDPADILLGLGASAISQFPD- 330

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
              + +  EK    W  +              + E +    ++  L  +        E  
Sbjct: 331 ---LIVQNEKQAGPWRALADAGQLTAARGTLRTPEDRRRGRIIEALLCQG-------EAH 380

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
            G    +      +R G + R+   R+  T+  +    S+ A
Sbjct: 381 VGTAHPLPDLSRFERLGLV-RLSEGRVALTRDALPYARSIAA 421


>gi|117922358|ref|YP_871550.1| coproporphyrinogen III oxidase [Shewanella sp. ANA-3]
 gi|117614690|gb|ABK50144.1| Radical SAM domain protein [Shewanella sp. ANA-3]
          Length = 445

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 152/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLEKFGTGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I +       ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNRLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGKMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIITDNGKMM 417


>gi|149920929|ref|ZP_01909390.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
 gi|149818201|gb|EDM77656.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
          Length = 471

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 87/394 (22%), Positives = 154/394 (39%), Gaps = 26/394 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----PR 69
           +   +L VYVH PFC  +C +C+  +     +     ++ +   +M  + +  G      
Sbjct: 67  EDRRALFVYVHVPFCAVRCGFCNLFTQKHPPEELPARWLSTLFEQMDAVAEAVGVGQADT 126

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKA 128
             +    GGGTP+ +E   +  +L  + + + V       ++E +P +   +       A
Sbjct: 127 GFARWALGGGTPTFLEAGALEALLVRLRERFGVDLPTTPSSVETSPETCTDDRLAVLEAA 186

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQW 187
           G  RIS+GVQS  E SLR +GR   A  A+AA+   R   FP ++ DLIY +  QT   +
Sbjct: 187 GTRRISIGVQSFAEASLRAVGRPQAAPLAVAALDRIRARSFPILNVDLIYGIAGQTPADF 246

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             ++  A+ +A + + LY L     T   K  +  D      +  +      ++     G
Sbjct: 247 VADIDHAMRWAPEQVYLYPLYQRPLTGLGKRARSWD------DQRIACLRAGRARLLEAG 300

Query: 248 LHAYEISNHSFLGAESLH---NLNYWRYGD-YIGIGPGAHSRVKVGSH-----RVAISIE 298
                +       A SL       Y    D  IG+G GA S  +   +       A  + 
Sbjct: 301 YEQVSMRMFQRPPA-SLGLDPGPAYCCQADGMIGLGVGARSYARSLHYSDDWAVGAAGVR 359

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
                W+   R +         L  ++Q   +L+  L    G+  + +    G  +D + 
Sbjct: 360 SIVGEWVGRTRADFEHARHGFVLDGDEQRRRWLIQSLLQVAGLERQAYVERFGATVDADF 419

Query: 359 ---ERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                 L   G +E    + +R T  G+   D++
Sbjct: 420 GSTLAELGAHGLLE-DDGATVRPTTLGLEWADAI 452


>gi|260589628|ref|ZP_05855541.1| oxygen-independent coproporphyrinogen III oxidase 2 [Blautia
           hansenii DSM 20583]
 gi|331083060|ref|ZP_08332177.1| hypothetical protein HMPREF0992_01101 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260539868|gb|EEX20437.1| oxygen-independent coproporphyrinogen III oxidase 2 [Blautia
           hansenii DSM 20583]
 gi|330405062|gb|EGG84599.1| hypothetical protein HMPREF0992_01101 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 483

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 20/313 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F+S    R++   ++++ + L E+ ++ +    +++ +I
Sbjct: 162 ENGYSLYVGIPFCPSICLYCSFSSSPLERWRDKVDSYLDALLKELDFIAETMKDKTLDTI 221

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EPQ +  +L  I K + +    E TIEA  P S+     Q  R+  V RI
Sbjct: 222 YIGGGTPTTLEPQQLHRLLGHIQKRFPMEQVKEYTIEAGRPDSITKEKLQAIREYPVTRI 281

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++  ++L+ +GRNH   +   A  LAR   F  ++ DLI  LP +     E  L+
Sbjct: 282 SVNPQTMNAETLKIIGRNHTVEDTRHAFALARECGFDNINMDLIVGLPGEHKDDVEHTLK 341

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
              +   D L+++ L +++                      ++  +  +   +  +  Y 
Sbjct: 342 EIQALDPDSLTIHSLAVKRAARL--RMFKDQYEEMGFENNQEIMEMAMNYARSCQMGPYY 399

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVAISI 297
                      E   ++ +    ++N+         I  G GA +++    G     I  
Sbjct: 400 LYRQKNMCGNLENVGYAKVDKAGIYNILIMEEKQTIIAAGAGASTKLVSDHGQKIERIEN 459

Query: 298 EKHPESWLKMVRK 310
            K   +++  + +
Sbjct: 460 VKDVTNYITRIDE 472


>gi|21231539|ref|NP_637456.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768404|ref|YP_243166.1| coproporphyrinogen III oxidase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21113221|gb|AAM41380.1| oxygen-independent coproporphyrinogen III oxidase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66573736|gb|AAY49146.1| oxygen-independent coproporphyrinogen III oxidase [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 470

 Score =  215 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 82/361 (22%), Positives = 143/361 (39%), Gaps = 21/361 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A+      +   +L +YVH PFC   C YC  N  + R     + ++   L E     +
Sbjct: 49  AAFLRAQEQRPGRALSLYVHVPFCSSPCFYCGCNRIITRDATKGQAYVARLLREATSAAE 108

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV--EITIEANPSSVEVNN 121
            L   R+I  +  GGGTP+ + P  +  +LDG+ + +  S++   +I+IE +P +V+  +
Sbjct: 109 HLERSRTIVQLHLGGGTPNFLSPALLGDLLDGLRRIFRFSTDPGRDISIELDPRAVQSGD 168

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
                + G  R+SLG+Q  +      + R     E +  I   R      ++ DL+Y LP
Sbjct: 169 VAALAQIGFTRVSLGIQDFDPDVQAAINRRQGEQETLELIAACRQAGIASVNVDLVYGLP 228

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT   +   L R L+   D L++Y        +F    +     LPS    + L  L  
Sbjct: 229 RQTQAGFARTLDRVLAARPDRLAIYGYAHMPH-VFKAQRQIDVQELPSAQDRLALLGLAV 287

Query: 241 SITSAHGLHAYEISNHSFL-----GAESLHNL--NYWRY-----GDYIGIGPGAHSRVKV 288
              SA G     + + +        A+   +L  N+  Y      D IG+G  A S    
Sbjct: 288 HTLSAAGYQYIGMDHFALPSEDLAIAQRRGDLQRNFMGYTTHADTDLIGLGVSAISHFGD 347

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +      +   +W   V +    V     LS++      ++  L  R  + +     
Sbjct: 348 SYSQN----PRELAAWDAAVDRGALPVCRGMQLSADDLLRAEVIQALLCRGRVDLAAVAQ 403

Query: 349 L 349
            
Sbjct: 404 R 404


>gi|77464272|ref|YP_353776.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides 2.4.1]
 gi|1708185|sp|P51008|HEMZ_RHOS4 RecName: Full=Coproporphyrinogen-III oxidase, anaerobic 2;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1070381|emb|CAA89819.1| anaerobic coproporphyrinogen oxidase [Rhodobacter sphaeroides]
 gi|77388690|gb|ABA79875.1| Anaerobic coproporphyrinogen oxidase (HemZ) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 450

 Score =  215 bits (549), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 72/396 (18%), Positives = 143/396 (36%), Gaps = 22/396 (5%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISS 73
              S+ +Y+H PFC + C +C   +           +  +  +E+  +R +L     ++ 
Sbjct: 47  AGGSISLYLHVPFCRRLCWFCACRTQGTSSDAPVRAYAAALKSELALLRARLAPGVRLAR 106

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + +GGGTP+L+ P  I  +   I       +  + ++E +P+ ++        +AG+ R+
Sbjct: 107 MHWGGGTPTLLPPTLIHELALAIRDAVPSDAETDFSVEIDPTEIDAARLDALFEAGMTRV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+GVQ  +    + +GR  +          L       +  D++Y LP QT       +Q
Sbjct: 167 SIGVQDFDPLIQQSIGREQSFELTQRLTEDLRHRGLMGLDADILYGLPHQTAPGVADSVQ 226

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + LS + D +++         +  +        +P     +DL+   +++    G     
Sbjct: 227 KLLSLSPDRVAVLGYAHVPA-VSRRQLMIPTASIPGPEERLDLFETARTLILWDGYQQVG 285

Query: 253 ISNHSFLGAESLHN-------LNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
           + + +  G    H         ++  Y D      IG+G  A SR   G  + A S   H
Sbjct: 286 LDHFARAGDPLAHAHACGRLCRSFQGYTDDRAEVLIGLGASAISRFPQGFTQNAPSTSDH 345

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIE 357
               L+ +R    +      LS E +    ++  L     IS              L+  
Sbjct: 346 ----LRAIRSGRFSTARGHVLSDEDRLRGRMIEQLLCEFRISRAQILARFAVAPERLETL 401

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                     +  +    L   + G  +   V  + 
Sbjct: 402 FRTCAAAFPGVVEITGHGLEILEEGRPLARIVARSF 437


>gi|283795476|ref|ZP_06344629.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. M62/1]
 gi|291077141|gb|EFE14505.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. M62/1]
          Length = 518

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S  + +++     ++ +   EM ++ +    R + ++
Sbjct: 194 ENGYSLYIGIPFCPTTCLYCSFTSFPIGKWQGRTGLYLNALFREMDYVAEKMKGRPLDTV 253

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ + P+++  ILD + + + +    E T+EA  P S+     Q  R  G+ RI
Sbjct: 254 YFGGGTPTSLSPEDLDAILDKVERTFPMDQVKEFTVEAGRPDSITEEKLQVLRNHGITRI 313

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +      LA R  F  ++ DLI  LP++        ++
Sbjct: 314 SINPQTMKQETLDLIGRRHTVEQVKETFRLARRMGFDNINMDLIVGLPEEDEEDVRNTME 373

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +      D L+++ L I++        +   +L +      +D+             + Y
Sbjct: 374 QIKELRPDSLTVHSLAIKRAARLNMFRERYGNLKITGTQEMIDMTARYAREMGMEPYYLY 433

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV--AISIEK 299
                    E   +S  G   ++N+        I   G G  ++V              K
Sbjct: 434 RQKNMAGNFENVGYSVPGKACIYNILIMEEKQTIMACGAGTTTKVVFPRENRLERAENVK 493

Query: 300 HPESWLKMVRK 310
             E +++ V +
Sbjct: 494 EVEQYIERVDE 504


>gi|24375997|ref|NP_720040.1| coproporphyrinogen III oxidase [Shewanella oneidensis MR-1]
 gi|24350998|gb|AAN57484.1|AE015884_6 oxygen-independent coproporphyrinogen III oxidase, putative
           [Shewanella oneidensis MR-1]
          Length = 445

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLEKFGTGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGKMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  + +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYNKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIITDNGKMM 417


>gi|16125660|ref|NP_420224.1| coproporphyrinogen III oxidase [Caulobacter crescentus CB15]
 gi|221234414|ref|YP_002516850.1| coproporphyrinogen III oxidase [Caulobacter crescentus NA1000]
 gi|13422772|gb|AAK23392.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           crescentus CB15]
 gi|220963586|gb|ACL94942.1| oxygen-independent coproporphyrinogen-III oxidase hemN [Caulobacter
           crescentus NA1000]
          Length = 454

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 133/356 (37%), Gaps = 19/356 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
           +  + L VYVH PFC + C YC  ++ +         +      E+    +  G    ++
Sbjct: 47  RSEDHLSVYVHVPFCRRLCWYCGCHTSIAHTYERVGTYADVLAREIDLTARRLGEHDGLA 106

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGG+P+ + P +   ++  +   + V    EI  E +P  +         +AGV R
Sbjct: 107 HLHFGGGSPNALSPSDFKRLVAQLKTAFRVRPGAEIAAELDPGMLSDTFVDATGEAGVTR 166

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMEL 191
           +SLGVQ+ +      + R     +  AA+   R +    ++FDL+Y LP QT+       
Sbjct: 167 VSLGVQTFDPTVQALVNRVQPFEQVAAAVERLRAVGVGGLNFDLMYGLPGQTVENVYASA 226

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A++   D ++++        +        +  L   +      +   +  +  G    
Sbjct: 227 KTAVALRPDRIAVFGYAHVP-WMKKHQTMIQETDLADIDGRWAQADAADAALTEAGYVRI 285

Query: 252 EISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEK 299
            + +++          AE     N+  Y D      + IGP +  + + G  +       
Sbjct: 286 GLDHYALPDDSLSRAAAEGRLRRNFQGYTDDPAPVLVPIGPSSIGQFREGFVQNLTPT-- 343

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
             ++W   + ++   +      S E +    ++  L     + V       G + D
Sbjct: 344 --DAWAARIARDELPLGRALAFSDEDRLRAAVIERLMCDMTVDVAAICEAHGFSTD 397


>gi|146294590|ref|YP_001185014.1| coproporphyrinogen III oxidase [Shewanella putrefaciens CN-32]
 gi|145566280|gb|ABP77215.1| Radical SAM domain protein [Shewanella putrefaciens CN-32]
 gi|319424778|gb|ADV52852.1| Radical SAM domain protein [Shewanella putrefaciens 200]
          Length = 445

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGQMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|332186253|ref|ZP_08387998.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           S17]
 gi|332013621|gb|EGI55681.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           S17]
          Length = 445

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/381 (19%), Positives = 139/381 (36%), Gaps = 25/381 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              + +YVH P+C + C YC  N+         ++++++ L E+  +  L   R ISS+ 
Sbjct: 44  ETPVSLYVHVPYCREICWYCGCNTGAVGRAQRLDDYVEALLAEIATVAALLDGR-ISSVH 102

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+++ P  +  I D I   + V+   E  IE +P      +       G+ R+S+
Sbjct: 103 FGGGSPNVLSPIQLLRIADAIRDQFGVAEPAEWAIEIDPRGFGAEHAAALATIGITRVSI 162

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRA 194
           G Q+      R + R          +   R +    ++ DL+Y LP Q+       +  A
Sbjct: 163 GAQTFAAPIQRAINRIQPYDLVADVVDRLRLVGISYINLDLMYGLPHQSRADVAASIASA 222

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+     ++++        +  +        LP          L      A G  A    
Sbjct: 223 LTLRPSRIAMFGYAHLPA-MLPRQRMIDAAALPDAEERFHQSELAHERMIAAGYRAIGFD 281

Query: 255 NHS-------FLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPE 302
           + +          A      N+  + D      +G+G  A S+       V +  EKH  
Sbjct: 282 HFARADDRLVRADAAGRLRRNFQGFTDDPAQVVVGLGTSAISQFDG----VIVQNEKHVG 337

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-----IE 357
            + ++V+    A +      +E +    ++  +       +       G +        E
Sbjct: 338 RYRELVKGGRLAGIRGVRREAEDRLRGAIIERILCDGHADLTTICAAHGADPALFVDMPE 397

Query: 358 CERNLQRQGFIERVQFSRLRC 378
               L ++G I  ++  RL  
Sbjct: 398 RLATLAKRG-IVHIEGMRLAV 417


>gi|302541326|ref|ZP_07293668.1| coproporphyrinogen III oxidase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458944|gb|EFL22037.1| coproporphyrinogen III oxidase [Streptomyces himastatinicus ATCC
           53653]
          Length = 449

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/406 (18%), Positives = 151/406 (37%), Gaps = 18/406 (4%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ- 64
           A       +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   + + 
Sbjct: 31  ALRELWADEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEGLTTAYLDALERQADAVSEA 90

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQ 123
           L      ++  FGGGTP+ +E   +  + D   K      + V +++EA+P++   +   
Sbjct: 91  LGDGARFAAAAFGGGTPTFLEAAELERLCDIAEKRMGADLAAVPLSVEASPATATADRLA 150

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQ 182
                G  R+SLGVQS  +   R   R    ++  AA+   R     + + DLIY +  Q
Sbjct: 151 VLAARGATRLSLGVQSFVDAEARSAVRPQRRADVEAALTRIREAGIPVLNIDLIYGIDGQ 210

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +   W   L  AL++  + L LY L +   T   +           E            +
Sbjct: 211 SERSWLRSLDAALAWRPEELYLYPLYVRPLTGLGRKEVAESDHEWDERRLRLYRLGRDHL 270

Query: 243 TSAHGLHAYEISNHSFLGAES----LHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISI 297
               G     +       A S        +Y    D  IG+G GA S      +    ++
Sbjct: 271 LGR-GYEQVSMRMFRRADAPSTASATGGEDYACQTDGMIGLGCGARSYTSGLHYSFDYAV 329

Query: 298 EKH-----PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
           +        + ++     +         ++ ++     L+  +   EG+ V  +      
Sbjct: 330 DMREIRGIIDDYVSRPAADFGHAEHGRAITGDEARRRHLLQSVLQAEGLDVAAYRARFAA 389

Query: 353 NLDIECERNLQR---QGFIER-VQFSRLRCTQRGMTMLDSVIANLA 394
           +   +    L R   +G+++   +  RLR +  G+   D++   L 
Sbjct: 390 DPAEDFPEELARFAARGWLDPAAEPGRLRLSAEGLAHSDALGPELF 435


>gi|225376528|ref|ZP_03753749.1| hypothetical protein ROSEINA2194_02170 [Roseburia inulinivorans DSM
           16841]
 gi|225211627|gb|EEG93981.1| hypothetical protein ROSEINA2194_02170 [Roseburia inulinivorans DSM
           16841]
          Length = 489

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 144/318 (45%), Gaps = 25/318 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    ++   ++++ +   E+ ++    G + ++SI
Sbjct: 162 ENGYSLYIGIPFCPTTCLYCSFTSYPLVSWRQKVDSYLDALEKELDYVAVKFGKKHLNSI 221

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +  +K  + RI
Sbjct: 222 YIGGGTPTTLEPYQLDRLIRKIRCSFDLSHCLEFTVEAGRPDSITREKLETLKKWDITRI 281

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L+ +GR H  ++ + +  LAR   F  ++ DLI  LP++++      L+
Sbjct: 282 SINPQTMKDETLKIIGRRHTVAQTVESFQLARELGFDDINMDLIMGLPEESLEDVRDTLE 341

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +  +   D+L+++ L +++           D          +  NLT       GL  Y 
Sbjct: 342 QVKALKPDNLTVHSLALKRAARLN--MFKEDYKDYKMVNTTEHMNLTAEYAKEMGLEPYY 399

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV 293
                      E   ++  G   ++N+        I   G GA ++         G+HR+
Sbjct: 400 LYRQKSMAGNLENVGYASPGKAGIYNILIMEEKQTIVACGAGASTKRVWNEPNPDGTHRI 459

Query: 294 AI-SIEKHPESWLKMVRK 310
                 K    +++ + +
Sbjct: 460 ERCENVKDVAQYIERIDE 477


>gi|237730471|ref|ZP_04560952.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
 gi|226906010|gb|EEH91928.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
          Length = 445

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 151/391 (38%), Gaps = 40/391 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           VY+H PFC   C +C F  + R  +     +  + L E++      L     I +++FGG
Sbjct: 60  VYLHIPFCATHCTFCGFYQN-RFEEDNCALYTNALLREIEMEADSALHQSAPIHAVYFGG 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  Q++A I+  +     ++ + EITIE    + +         AG NR S+G+Q
Sbjct: 119 GTPSALSAQDLARIITALRDKLPLAPDCEITIEGRVLNFDDARIDACLDAGANRFSIGIQ 178

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  +   A A +  L +     +  DL++ LP Q    W  +L  A   
Sbjct: 179 SFNSRIRKKMARTSDGPTATAFMQGLVKRDRAAVVCDLLFGLPGQDAKLWGEDLAIARDI 238

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K  + G   +PS     DLY        + G      S+ +
Sbjct: 239 GLDGVDLYALNLIPNTPLGKAVETGRTTVPSPAERRDLYLQGCDFMDSAGWRCISNSHWA 298

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   V       +  +E++  +W + +        
Sbjct: 299 RTTRERNLYNLLIKQGADCLAFGSGAGGSVNG----YSWMVERNLNTWHESIAAGKKP-- 352

Query: 317 EKEFLSSEQQADEFLMMGLRLRE-GISVKDWEMLAGRNLDIECERNL--QRQGF------ 367
                         LMM +R  E G   +   + AG          L    Q        
Sbjct: 353 --------------LMMMMRTAERGFQWRH-TLQAGIETARIPLDELTPHAQKLAPLLTQ 397

Query: 368 -----IERVQFSRLRCTQRGMTMLDSVIANL 393
                + R   + +R T  G     +++ +L
Sbjct: 398 WHHAGLTRDASTCVRLTNEGRFWASNILQSL 428


>gi|120597231|ref|YP_961805.1| coproporphyrinogen III oxidase [Shewanella sp. W3-18-1]
 gi|120557324|gb|ABM23251.1| Radical SAM domain protein [Shewanella sp. W3-18-1]
          Length = 445

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKSL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGQMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|307325397|ref|ZP_07604599.1| Coproporphyrinogen dehydrogenase [Streptomyces violaceusniger Tu
           4113]
 gi|306888866|gb|EFN19850.1| Coproporphyrinogen dehydrogenase [Streptomyces violaceusniger Tu
           4113]
          Length = 458

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/411 (18%), Positives = 157/411 (38%), Gaps = 22/411 (5%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           A       +  ++L +Y+H PFC  +C +C+  + +   +     ++ +   +   +R+ 
Sbjct: 34  ALRELWAAEPKDALSLYLHIPFCEVRCGFCNLFTRIGAPEGLVTAYLDALERQAGAVREA 93

Query: 66  TG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQ 123
            G     ++  FGGGTP+ +E   +  + D   K      + V +++EA+P++   +   
Sbjct: 94  LGEDARFAAAAFGGGTPTFLEAAELERLCDIAEKGMGADLAAVPLSVEASPATATADRLA 153

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQ 182
                G  R+SLGVQS  +   R   R    ++  AA+   R+    + + DLIY +  Q
Sbjct: 154 VLAGRGTTRLSLGVQSFVDAEARSAVRPQRRADVEAALGRIRDAGIPVLNIDLIYGIDGQ 213

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---------HKDGDLVLPSENVAV 233
           T   W   L  AL++  + L LY L +   T   +            +       +   +
Sbjct: 214 TEDSWRRSLDAALAWRPEELYLYPLYVRPLTGLGRKEAREPEAEWAAEWAAEAEWDERRL 273

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR 292
            LY   +    AHG     +      GA +    +Y    D  +G+G GA S      + 
Sbjct: 274 RLYRSGRDQLLAHGYEQVSMRMFRAQGAPATSGEDYACQTDGMVGLGCGARSYTSALHYS 333

Query: 293 VAISIEKH-----PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              +++        + ++     +         ++ ++     L+  +   EG+    + 
Sbjct: 334 FDYAVDMREIRGIIDDFVSRPAADFARAEHGRRMTGDEARRRHLLQSVLQAEGMEAAGYR 393

Query: 348 MLAGRNLDIEC---ERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
              G +   +          +G+++      RLR +  G+   D++   L 
Sbjct: 394 ARFGTDPAEDFPVELARFAARGWLDAEAAPGRLRLSPEGLAHSDALGPELF 444


>gi|291539588|emb|CBL12699.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Roseburia intestinalis XB6B4]
          Length = 506

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 142/318 (44%), Gaps = 25/318 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    +K   + ++ +   E+ +       ++++SI
Sbjct: 179 DNGYSLYIGIPFCPTTCLYCSFTSYPLVSWKNRVDAYLDALEREIDYTAAKFYHKNLNSI 238

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +  RK G+ RI
Sbjct: 239 YIGGGTPTTLEPYQLDRLIRKIKCSFDLSDCLEFTVEAGRPDSITREKLEVLRKWGITRI 298

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H+  + + +  +AR   F  ++ DLI  LP++++      L+
Sbjct: 299 SINPQTMQQRTLDLIGRRHSVEQTVESFKIARELGFDDINMDLIMGLPEESLEDVRDTLE 358

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           + +    D+L+++ L +++        +D               +LT S      L  Y 
Sbjct: 359 QIMQLKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTQE--HMDLTASYAKKMDLFPYY 416

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV 293
                      E   ++  G   ++N+        I   G GA ++         G+HR+
Sbjct: 417 LYRQKGMAGNLENVGYAKEGKAGVYNILIMEEKQTIVACGAGASTKRVWTEPNPDGTHRI 476

Query: 294 AI-SIEKHPESWLKMVRK 310
                 K    +++ + +
Sbjct: 477 KRCENVKDVGQYIERIDE 494


>gi|291535024|emb|CBL08136.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Roseburia intestinalis M50/1]
          Length = 500

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 140/318 (44%), Gaps = 25/318 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    +K   + ++ +   E+ +       + ++SI
Sbjct: 173 DNGYSLYIGIPFCPTTCLYCSFTSYPLVSWKNRVDAYLDALEKEIDYTAAKFYHKHLNSI 232

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +  RK G+ RI
Sbjct: 233 YIGGGTPTTLEPYQLDRLIRKIKCSFDLSDCLEFTVEAGRPDSITREKLEVLRKWGITRI 292

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H+  + + +  +AR   F  ++ DLI  LP++++      L+
Sbjct: 293 SINPQTMQQRTLDLIGRRHSVEQTVESFKIARELGFDDINMDLIMGLPEESLEDVRDTLE 352

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           + +    D+L+++ L +++        +D               +LT S      L  Y 
Sbjct: 353 QIMQLKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTQE--HMDLTASYAKKMDLFPYY 410

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV 293
                      E   ++  G   ++N+        I   G GA ++         G+HR+
Sbjct: 411 LYRQKGMAGNLENVGYAKEGKAGVYNILIMEEKQTIVACGAGASTKRVWTEPNPDGTHRI 470

Query: 294 AI-SIEKHPESWLKMVRK 310
                 K    ++  + +
Sbjct: 471 ERCENVKDVAQYIARIDE 488


>gi|317052295|ref|YP_004113411.1| Radical SAM domain-containing protein [Desulfurispirillum indicum
           S5]
 gi|316947379|gb|ADU66855.1| Radical SAM domain protein [Desulfurispirillum indicum S5]
          Length = 360

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/380 (25%), Positives = 166/380 (43%), Gaps = 30/380 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            GVY+H PFC  KC YC F S V      +E+++++ + ++  +          +++FGG
Sbjct: 6   FGVYLHVPFCSSKCAYCSFYSAVADGGT-RESYVRALIHQLTQV-DFGALSPPYTLYFGG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+ P   A +   + +       +E+T+E NP  V+V   +  R A V R+S+GVQ
Sbjct: 64  GTPSLLPPSFFASVTHILKQRLGCLP-MEVTVECNPD-VDVACLRELRAAHVTRVSVGVQ 121

Query: 139 SLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S+E + L  LGR H  AS+  A +   + +   ++ D +  +P   + Q  ++L      
Sbjct: 122 SMEPRVLELLGRRHRMASDFPAVLRAGQRLGLEVAVDFMAGVPGAPVDQVLLDLASFEF- 180

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            VDH+S+Y L++E G                 +   D ++  +    A G   YEI+N +
Sbjct: 181 -VDHVSVYMLSLEAGHPLSAELD--------GDFQHDSFSHARDALVARGFEWYEIANFA 231

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA-VV 316
             G  S HN  YW    Y+ +G GA        +RV       PE       ++G   V 
Sbjct: 232 RPGRRSQHNSLYWSGLPYVALGAGAVGFSGSVRYRV-------PEDLRVFCEQDGLPAVC 284

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
            +E++ + +   E +M+G+R  +G+     E L       +          +E     R 
Sbjct: 285 IEEYIGASELLRERIMLGMRTADGVEGAVLEELYP-AWRQKLAGPWAAC--LEACAQGRW 341

Query: 377 RCTQRGMTMLD--SVIANLA 394
           R        L+   V+ +  
Sbjct: 342 RIAP--RFWLNYGDVMGHFF 359


>gi|320332717|ref|YP_004169428.1| Radical SAM domain-containing protein [Deinococcus maricopensis DSM
           21211]
 gi|319754006|gb|ADV65763.1| Radical SAM domain protein [Deinococcus maricopensis DSM 21211]
          Length = 439

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 85/393 (21%), Positives = 161/393 (40%), Gaps = 15/393 (3%)

Query: 6   AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           +  +    +   +L +YVH PFC  +C +C+  + V      +  ++ +   +   +R  
Sbjct: 34  SLRDAWADEARRNLYLYVHVPFCEMRCGFCNLFTTVGAPAALEAAYLDALERQAHAVRAQ 93

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQG 124
            G  S S I  GGGTP+ +E   +  + D +   +    + +  ++E +P++        
Sbjct: 94  LGEVSFSRIALGGGTPTYLEAAELERVFDLLDGVFGARPDAQPTSVETSPATATPERLAV 153

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQT 183
               GV+R+S+GVQS  E  +R +GR+   +E  AA+   R      ++ DLIY L  QT
Sbjct: 154 LAARGVSRVSIGVQSFVESEVRSVGRSQRNAEVHAALSNIRAAGLGHLNIDLIYGLAHQT 213

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              W+  L+ AL +A + L LY L +   T   ++ +  D      +  ++LY L ++  
Sbjct: 214 PETWQHSLEDALRWAPEELFLYPLYVRPLTGIGRLGRTWD------DERLELYRLGRAFL 267

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSH-----RVAISI 297
            A+G     +               Y    D  +G+G GA S  +   +       A+ +
Sbjct: 268 RANGYVQTSMRRFQRAELPLESEPEYTCQLDGMVGLGCGARSYTRGLHYASEYAVGAVGV 327

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG-RNLDI 356
               + ++    +          LS+++Q   FL+  L    G+S   + +  G   L+ 
Sbjct: 328 RDILKDFVARPAEAFAFATNGLRLSADEQRRRFLLQSLLHHAGVSAGLYRLAFGSSPLED 387

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
             E        +       L+    G+   D++
Sbjct: 388 HPELGELLALGLATWDGETLKLNDAGLEQSDAI 420


>gi|229826223|ref|ZP_04452292.1| hypothetical protein GCWU000182_01595 [Abiotrophia defectiva ATCC
           49176]
 gi|229789093|gb|EEP25207.1| hypothetical protein GCWU000182_01595 [Abiotrophia defectiva ATCC
           49176]
          Length = 495

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 20/313 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  YK     ++Q+   E+ +   +   + ++++
Sbjct: 169 KNGYSIYIGIPFCPTTCLYCSFTSYPIGGYKKKVGEYLQALFKEIDFASTILPHKKLTTV 228

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ I  + + L+LD I     ++S  E T+EA  P S+  +  +  ++ GV R+
Sbjct: 229 YIGGGTPTSISAEELELLLDYINMKLPMASVKEFTVEAGRPDSITRDKLKVMKRLGVKRM 288

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L+F+GR H++     A  +AR      ++ DLI  LP +T+   E  L 
Sbjct: 289 SINPQTMSDKTLKFIGRMHDSESVRRAFTMAREEGMEDINMDLIVGLPGETVKDTEYTLS 348

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
                  D L+++ L I++        K  +L             LT      +G   Y 
Sbjct: 349 EIKKLDPDDLTVHALAIKRAAAL--KLKLNELTDMIPTDTALQQQLTYEFARDNGYEPYY 406

Query: 252 -----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR--VKVGSHRVAISI 297
                      E   ++  G E L+N+         IG+G G+  +   + G+       
Sbjct: 407 LYRQKNIADNLENVGYARPGKEGLYNILIMEEKHPIIGLGAGSSCKFVFREGNRIERTEN 466

Query: 298 EKHPESWLKMVRK 310
            K    +++ + +
Sbjct: 467 VKFVMDYIERIDE 479


>gi|326791624|ref|YP_004309445.1| coproporphyrinogen dehydrogenase [Clostridium lentocellum DSM 5427]
 gi|326542388|gb|ADZ84247.1| Coproporphyrinogen dehydrogenase [Clostridium lentocellum DSM 5427]
          Length = 480

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/331 (19%), Positives = 147/331 (44%), Gaps = 21/331 (6%)

Query: 1   MKYLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTE 58
           M+ ++  E  +  Q     + +Y+  PFC  +C YC F ++ + + +   E ++++   E
Sbjct: 137 MREVAKEELAILRQNKPEEISLYIGIPFCPTRCVYCSFTAYSLEKCEAQVEPYLEALFKE 196

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
           + ++ +      I S++ GGGTP+ +    +  +L+ +  ++ +S   E TIEA  P ++
Sbjct: 197 ITFVAEAKKGVPIRSLYIGGGTPTSLNEDQLLCLLEHVKSSFDLSEVEEYTIEAGRPDTI 256

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLI 176
             +  +  ++ GV RIS+  QS+ +++L  +GR H   +       AR +    ++ D+I
Sbjct: 257 TKDKLRIMKEQGVGRISINPQSMNQKTLDTIGRRHGVEDIKRVFAEARALGHDCINMDMI 316

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVD 234
             LP +T+      L        ++++++ + I++ +   +  M  +    L        
Sbjct: 317 LGLPGETVADVAYTLDELEKLGPENITVHTMAIKRASRLKEELMAGEEAYALTEGEKIQQ 376

Query: 235 LYNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPG 281
           +  L +   +  GL  Y            E   ++  G + ++N+      +  I +G G
Sbjct: 377 MLELCEERMARMGLKPYYMYRQKNMLGNFENVGYAAPGTQCVYNIEIMEEKESIIALGAG 436

Query: 282 AHSR--VKVGSHRVAISIEKHPESWLKMVRK 310
           A ++   + G     I   K  + +++ + +
Sbjct: 437 AITKMVYQNGERIDRIPNVKSLKDYIERIDE 467


>gi|114321504|ref|YP_743187.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227898|gb|ABI57697.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 466

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 149/386 (38%), Gaps = 28/386 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C +   V   +     ++ +   E++W   +     ++  F GGGT
Sbjct: 65  LYAHVPFCNYACSFCCYAKKVGVEREQMARYVATLKRELEW---IPEGTPVNQFFIGGGT 121

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +    +  +L  IA       +   T+EA+P S+   +    ++ GV R+S+GVQSL
Sbjct: 122 PTALPADLLDELLGAIAGRMPYHGDPVHTVEASPESISDAHLAVLQRHGVRRVSMGVQSL 181

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +++ L  + R+H    A+       +    ++ DLIY LP QT   +  + QR     V 
Sbjct: 182 DDEVLDSVRRSHGPDLALETCRRIIDAGLILNIDLIYGLPGQTHAGFRRDFQRVADAGVH 241

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY------NLTQSITSAHGLHAYEIS 254
            ++ Y L + + T   +    G+    +  +    +          S T  H     +  
Sbjct: 242 AVTAYNLRLNERTPVSRALSPGERFDIAGLMGWRAFVRDTAAEFGFSQTRWHTFKRLDTI 301

Query: 255 NHSFLGAESLHNLNYWRYGDY----IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
                   + H        D      GIG  A S +    +R       + E+++  VR 
Sbjct: 302 A-------ARHQWLPTAGADMRGHQFGIGMSARSSLGHNVYRNHH----NLETYMARVRD 350

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGF 367
               V E   L  +    +F+   L   + +S   +  + G  ++    E    L   G 
Sbjct: 351 GESPVQEVIRLGPQDLRTQFIARSLGDGQVLSKARYAEVFGNAIEADHGETLARLAAGGL 410

Query: 368 IERVQFSRLRCTQRGMTMLDSVIANL 393
           +   + S +  T+ G  + D V  + 
Sbjct: 411 LADTESS-VSLTEDGRLLHDLVTLSF 435


>gi|271964726|ref|YP_003338922.1| coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
 gi|270507901|gb|ACZ86179.1| Coproporphyrinogen dehydrogenase [Streptosporangium roseum DSM
           43021]
          Length = 486

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 80/414 (19%), Positives = 152/414 (36%), Gaps = 39/414 (9%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +G+   SL +Y+H PFC  +C +C+  +     +     ++ +   + + +R        
Sbjct: 67  SGEPLGSLFLYLHIPFCEMRCGFCNLFTRTGAPEELVAAYLDALERQAEAVRDALEEPRF 126

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGV 130
            +   GGGTP+ +    +  + D   +        V +++E +P++   +      + G 
Sbjct: 127 VTAAIGGGTPTYLSAAELTRMFDLTERIMGADLRAVPLSVETSPATATADRLAVLAERGT 186

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
            RIS+GVQS  +   R   R     E   A+ H+    F  ++ DLIY +  QT   W  
Sbjct: 187 TRISIGVQSFVDAEARAAIRPQKRQEVETALGHIRETGFEVLNIDLIYGIDGQTERSWRH 246

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  AL++  + + LY L +   T   +  +D D      +  + LY   +    A G  
Sbjct: 247 SLDAALAWKPEEIYLYPLYVRPLTGLGRRARDWD------DHRLGLYRQGRDHLLAAGYE 300

Query: 250 AYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPES 303
              +      G  S     Y    D  +G+G GA S      +       A  +    + 
Sbjct: 301 QVSMRMFRLRG--SSGATGYDCQSDGMVGLGCGARSYTSGLHYSYEYAVGAGQVRAIIDD 358

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           ++++             L  +++    L+  L   EG+    +    G  +  +   +L+
Sbjct: 359 YVRLAPGEFALANVGFRLDEDERRRRHLIQSLLQAEGLDPAAYRARFGTEVTADFGEDLE 418

Query: 364 R---QGFIERV--------------------QFSRLRCTQRGMTMLDSVIANLA 394
           R   +G++E                         RLR    G+   D++   L 
Sbjct: 419 RLAGRGWLEATGSEAGTRPGRSGADESHDGAGGGRLRLAAEGLAHSDAIGPALF 472


>gi|332975140|gb|EGK12042.1| oxygen-independent coproporphyrinogen III oxidase 2 [Desmospora sp.
           8437]
          Length = 505

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 28/333 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
              + +Y+  PFC  KC YC F ++  R + G  E F+     EM+ +      R   ++
Sbjct: 170 DREVSLYIGIPFCPTKCAYCTFPAYAIRGRNGSVEEFLAGLHEEMEAIGAWLKSRGLPVT 229

Query: 73  SIFFGGGTPSLIEPQNIALIL-DGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + +  +               E+T+EA  P +++V      R+  V
Sbjct: 230 TIYFGGGTPTSITARQMDDLFVKMKTAIPGYGGVRELTVEAGRPDTLDVEKLDLLRRWKV 289

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS EE +L+ +GR+H   E +    LAR++    ++ DLI  LP +    +  
Sbjct: 290 DRISINPQSFEENTLKLIGRHHTVQETLEKYELARSMGLHNINMDLIIGLPGEGPDTFRQ 349

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+       + L+++ L+ ++G+   +  +         +   ++ N  ++ T   G  
Sbjct: 350 SLRMMEELKPESLTVHTLSFKRGSHMTRNPEKYKTA--DRDQITEMVNDARAWTRRMGYV 407

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++F G ESL+N+         IG+G GA S++          
Sbjct: 408 PYYLYRQKNILGNQENVGYAFPGEESLYNIIIMEERQTIIGLGCGAVSKIIPPGTDRIHR 467

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
               K P++++   R++      +E L++  +A
Sbjct: 468 FPNPKEPQAYIDTYREHI-----REKLTALDRA 495


>gi|160934232|ref|ZP_02081619.1| hypothetical protein CLOLEP_03103 [Clostridium leptum DSM 753]
 gi|156866905|gb|EDO60277.1| hypothetical protein CLOLEP_03103 [Clostridium leptum DSM 753]
          Length = 492

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 22/327 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           + A +  ++     S  +YV  PFC  +C YC F S  + R       ++     E++  
Sbjct: 152 MKAEQKLLSLSRKESYSLYVSIPFCPTRCSYCSFVSQTIERAHKMIPEYVARLCEELEKT 211

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
            Q+       + S++ GGGTP+ +  + + L+L  I +N+  S   E T+EA  P ++  
Sbjct: 212 AQIAHELNLRLESVYIGGGTPTTLTWEQMELLLRTIRRNFDFSCCREFTVEAGRPDTITP 271

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYA 178
              +  ++ GV+RIS+  Q+L +  L  +GR H+A + I A  LAR   F  ++ DLI  
Sbjct: 272 EKLKAMKRYGVDRISINPQTLNDGVLELIGRKHSARQTIDAFKLARKEGFHHINMDLIAG 331

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP  ++T ++  +Q       + ++++ L ++K +      +   L       A  + + 
Sbjct: 332 LPGDSLTSFQNTIQGICQLDPESVTIHTLAMKKSSKLT--MEGKKLYRDECLEAAQMLDY 389

Query: 239 TQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR 285
              +  +     Y            E    +  G ES +N+         +  G GA ++
Sbjct: 390 AGEVLLSRQYAPYYLYRQSKMVGNLENVGWAKPGFESFYNVYVMDETHTILACGAGAVTK 449

Query: 286 VK--VGSHRVAISIEKHPESWLKMVRK 310
           +K   G +   +   K+P  +L   ++
Sbjct: 450 LKQPQGDYLERVFNFKYPYEYLSRFQE 476


>gi|307243814|ref|ZP_07525945.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306492817|gb|EFM64839.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 519

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 70/316 (22%), Positives = 152/316 (48%), Gaps = 20/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             + + +Y+  PFC  +C YC F SH + +Y   +E+++ + L E + +  +     ++I
Sbjct: 184 SEDKISLYLSIPFCPTRCLYCSFPSHSLDKYGQHRESYVDTLLKEARGIESIIEDFGKTI 243

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            SI+ GGGTP+ +E +++  ++  + K   ++   E T+EA  P ++  +  +  +K GV
Sbjct: 244 ESIYIGGGTPTSLEAKDMDYLITNLFKILDLTKIKEFTVEAGRPDTITRDKLKVLKKHGV 303

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
            RIS+  Q++ + SL  +GR H+  + +   H+ARN  F  ++ DLI  LP ++    E 
Sbjct: 304 TRISINPQTMNQVSLDRIGRKHSVEDIVDCYHMARNLGFDNINMDLILGLPGESPAMVEE 363

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +++ +    + ++++ L +++ +      +D    L +    V++ +++++    +G  
Sbjct: 364 TMKKIIDLDPESVTVHTLALKRASDLNINLQDHKNDLTNYRNMVEMIDISRTYMEENGYK 423

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVK--VGSHRVA 294
            Y            E   ++  G E L+N+           IG GA S+      +    
Sbjct: 424 PYYMYRQKHMLGNLENIGYAKPGYECLYNMQIMEEKQSNYAIGAGAVSKFVYLDENRIER 483

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ + +L  + +
Sbjct: 484 VDDVKNLDHYLARIDE 499


>gi|331090640|ref|ZP_08339491.1| hypothetical protein HMPREF9477_00134 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330401080|gb|EGG80675.1| hypothetical protein HMPREF9477_00134 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 479

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 61/324 (18%), Positives = 144/324 (44%), Gaps = 30/324 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ ++++K   + ++++   E+ ++ + +  + +++I
Sbjct: 146 ENGYSLYIGIPFCPTTCSYCSFTSYPIQQWKERTDEYLEALCKEISFVGETSKEKKLNTI 205

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E + +  +L  + K +++    E T+EA  P S+     +  ++  + RI
Sbjct: 206 YMGGGTPTTLEAEQLDRLLTHVEKTFSLEELKEFTVEAGRPDSITEAKLEVLKRHHITRI 265

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   + I    LAR   F  ++ DLI  L  + +      L+
Sbjct: 266 SINPQTMQQKTLDSIGRRHTVEDVIRIFRLARKLGFDNINMDLIAGLTGENVDDMRDTLE 325

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      D+L+++ L I++ +   +     +L+        ++  L         L  Y 
Sbjct: 326 KIKELNPDNLTVHSLAIKRASKLNQTETKKELM-NQSETLSEMIELAAKYAGEMELFPYY 384

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR------- 292
                      E   ++ +    ++N+         + +G GA +++ +   +       
Sbjct: 385 LYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIVAVGAGASTKIVLPKGKEIRDRKS 444

Query: 293 ------VAISIEKHPESWLKMVRK 310
                 V I   K  ++++  + +
Sbjct: 445 GDLKNIVRIENVKDVDAYIMRIDE 468


>gi|315637174|ref|ZP_07892396.1| coproporphyrinogen III oxidase [Arcobacter butzleri JV22]
 gi|315478541|gb|EFU69252.1| coproporphyrinogen III oxidase [Arcobacter butzleri JV22]
          Length = 325

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 91/304 (29%), Positives = 152/304 (50%), Gaps = 19/304 (6%)

Query: 55  FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
               ++   +    + I ++F GGGTPS I+      I + I  N  +   VEIT EANP
Sbjct: 8   LKNNIEKYVK-NRNKKIETVFIGGGTPSTIKAFEYKEIFEII--NPYLEEKVEITTEANP 64

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSF 173
           +S      +  +  GV+R+S GVQS + + L+FLGR+HN++ AI AI  A  I F  ++ 
Sbjct: 65  NSASFEWLENMKSLGVSRVSFGVQSFQNEKLKFLGRSHNSNSAIKAIQNASQIGFKEINC 124

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D+IY +   T+   + +L  A S  + H+S Y LTIE+GT F+K+    D      +   
Sbjct: 125 DIIYGVKNDTLNSIKEDLDIAFSLPITHISAYSLTIEEGTKFFKL----DKNSVKIDDED 180

Query: 234 DLYNLTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
             Y +     S +G   YEISN S    ++S HN  YW++ +Y+G+G GA   +      
Sbjct: 181 LSYEIF-DYFSKNGFTQYEISNFSRNKNSQSKHNYGYWQHKEYLGVGAGAVGYINKRREY 239

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
              ++E++ ++ L          VE E +  +    E +++G R   G+ ++ ++    +
Sbjct: 240 PLKNLEEYIKNPL---------FVEIEEIDEDDVKVEKVLLGFRCLNGVELELFDEKELK 290

Query: 353 NLDI 356
            +D 
Sbjct: 291 KIDE 294


>gi|323485944|ref|ZP_08091277.1| hypothetical protein HMPREF9474_03028 [Clostridium symbiosum
           WAL-14163]
 gi|323400734|gb|EGA93099.1| hypothetical protein HMPREF9474_03028 [Clostridium symbiosum
           WAL-14163]
          Length = 485

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 19/322 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC   C YC F S  + +++   + ++ +   EM ++ +    R + ++
Sbjct: 164 EKGYSLYIGIPFCPTTCLYCSFTSFPIGKWEGKTKLYLDALFREMDYVAEKMKGRPLDTV 223

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ + P ++  +L  +   +      E T+EA  P S+     +  RK G+ RI
Sbjct: 224 YFGGGTPTSLNPGDLDALLCKVEAAFPTDKVREFTVEAGRPDSITQEKLEVLRKHGITRI 283

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +     HLAR   F  ++ DLI  LP++T+   +  ++
Sbjct: 284 SINPQTMNQKTLDLIGRRHTVEDVREKFHLARGLGFDNINMDLIVGLPEETLCDVKNTME 343

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              + A D ++++ L I++         + G+L + +    +D+          +  + Y
Sbjct: 344 EIKALAPDSVTVHSLAIKRAARLNMFKERYGNLKIENTQEMIDMTARYAEEMGMNPYYLY 403

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV--KVGSHRVAISIEK 299
                    E   ++  G E ++N+        I   G G  ++V     +        K
Sbjct: 404 RQKNMAGNFENVGYAAPGKECIYNILIMEEKQTIMACGAGTTTKVLYPSENRIERAENVK 463

Query: 300 HPESWLKMVRKNGHAVVEKEFL 321
             E ++  V   G  +  KE L
Sbjct: 464 EVEQYISRV---GEMMERKERL 482


>gi|72161143|ref|YP_288800.1| coproporphyrinogen III oxidase [Thermobifida fusca YX]
 gi|71914875|gb|AAZ54777.1| coproporphyrinogen III oxidase, anaerobic [Thermobifida fusca YX]
          Length = 447

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 149/391 (38%), Gaps = 20/391 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRS 70
             + +++L +Y H PFC  +C +C+  +           ++ +   + + +   L G   
Sbjct: 45  RDEPTDALFLYFHIPFCEVRCGFCNLFTRAVPPAEQVTAYLDALARQAEAVADALGGTAR 104

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAG 129
            +   FGGGTP+ +    +  + D   +   V  + +  ++E +P++            G
Sbjct: 105 FARAAFGGGTPTYLTADELHRLYDLADRVLGVDLAAIPTSVETSPATATPERLDVVAARG 164

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQW 187
            +RIS+GVQS  +     +GR    ++   A+   R+     R++ DLIY +  QT   W
Sbjct: 165 ASRISIGVQSFLDAEAHAVGRPQRRADVDRALAAIRSHAPRARLNIDLIYGIAGQTPDSW 224

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L  A++Y  + + LY L +   T   K  +  D      +    LY   +      G
Sbjct: 225 RYSLDAAVAYRPEEIYLYPLYVRPLTGLGKRGRAWD------DQRRTLYQQGRDYLLERG 278

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISI-EKHPESWL 305
                +     + A S     Y    D  +G+G GA S  +   +    ++  +   + L
Sbjct: 279 YRQVSMRMFERVDAPSETGPAYCCQTDGMVGLGCGARSYTRGLHYSFDYAVGVRQVRAIL 338

Query: 306 KMVRKNGHAVVEKEFLS----SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
                 G    +   +      +++    L+  L   +G+ +  +      +   +    
Sbjct: 339 DDYISRGPGGFDCAEVGFRLDEDERRRRHLLQSLLQADGLDLDWYRSRFASDPRTDFPAE 398

Query: 362 ---LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              L ++G++       +R T  G+   D+V
Sbjct: 399 FAVLTQRGWVTETS-RVVRLTDEGLAYSDTV 428


>gi|317052185|ref|YP_004113301.1| Coproporphyrinogen dehydrogenase [Desulfurispirillum indicum S5]
 gi|316947269|gb|ADU66745.1| Coproporphyrinogen dehydrogenase [Desulfurispirillum indicum S5]
          Length = 457

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 148/396 (37%), Gaps = 24/396 (6%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K+   +   M    S     Y+  PFC  +C YC F +   R  + +  ++ + + E++ 
Sbjct: 46  KFQEVFRALMARPRSGKSAAYISIPFCKTRCLYCGFFNRFHRDDL-EAAYVDALIGELKQ 104

Query: 62  MR--QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
                      + +++ GGGTP+ +  +N+  +LD       ++++ EIT+E        
Sbjct: 105 SSSDPAVTSGPVHALYLGGGTPNALSAENLRRVLDAATCYLPLANDCEITVEGRIHGFGQ 164

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYA 178
           +      + G NR S+GVQS +    R + R  +    + A+          +  DL+Y 
Sbjct: 165 DKIDACLEGGANRFSIGVQSFDTNVRRSMARIDDRESVLQALERLMATDQAAVVIDLVYG 224

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYN 237
            P QTM  WE +++ A S A+D   LYQL +   +   K    G +           ++ 
Sbjct: 225 FPGQTMEIWEEDVRTAASLALDGADLYQLNVLPHSELAKRMAQGAIEPAADMTRQARMFA 284

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
               +  A+      +S+      E +L+N         +  G GA   +    +     
Sbjct: 285 QGLDVMEANRWRRLSVSHWGRTTRERNLYNQLVKNKAHILAFGCGAGGSLHGHGYF---- 340

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV-----KDWEMLAG 351
           +E+  E +L  +R+    +          +      +   +  G  V     +    L G
Sbjct: 341 VERDLERYLDSIREGRKPLAMVTARPDTDRE-----VTGAITGGFDVAALNLQQLAALLG 395

Query: 352 RNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMT 384
             L   C    +   + G +E+     +  T+ G  
Sbjct: 396 TELLERCLPLFEQWGKAGLLEQSGHW-VVLTRAGQF 430


>gi|217971430|ref|YP_002356181.1| coproporphyrinogen III oxidase [Shewanella baltica OS223]
 gi|217496565|gb|ACK44758.1| Coproporphyrinogen dehydrogenase [Shewanella baltica OS223]
          Length = 445

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F   +      Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGHMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPR 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|12004566|gb|AAG44093.1|AF215912_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 28/332 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N+  +Y+H PFC   C YCDF   +       + +++  + E+             +I+
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDFVRKIPSSNEEVDLYLEKIVDEIS-----GFFNKCKTIY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+SL
Sbjct: 57  IGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVSL 114

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  E+ LR L R H       AI+L   +    +S D IY LP   ++     ++  
Sbjct: 115 GVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINESIEFI 174

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y L I+ G++  K ++  D+         D     +++    G   YE+S
Sbjct: 175 KRNNIKHVSFYALEIKDGSIMNKRNEVIDI-----ETEEDQLEHIENVMEKIGYTRYEVS 229

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N S      S HNL YW   D+  IG GA+   K   ++   S       +L   +KN +
Sbjct: 230 NWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQNYGS-------YLNYYKKNQN 282

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                   + +      LMMGLR  +GI +  
Sbjct: 283 W-------NQKDIYLYILMMGLRKIDGIDLNK 307


>gi|153002617|ref|YP_001368298.1| coproporphyrinogen III oxidase [Shewanella baltica OS185]
 gi|151367235|gb|ABS10235.1| Coproporphyrinogen dehydrogenase [Shewanella baltica OS185]
          Length = 445

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F   +      Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGHMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKLIGAIKNDPR 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|302670708|ref|YP_003830668.1| oxygen-independent coproporphyrinogen III oxidase HemN1
           [Butyrivibrio proteoclasticus B316]
 gi|302395181|gb|ADL34086.1| oxygen-independent coproporphyrinogen III oxidase HemN1
           [Butyrivibrio proteoclasticus B316]
          Length = 527

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 65/319 (20%), Positives = 144/319 (45%), Gaps = 24/319 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ +  Y    +++I     E+ ++ +    +++ +I
Sbjct: 199 ENGYSLYIGIPFCPTTCLYCSFTSYPIGAYSKIVDDYISCLEKEIDYVAENFEGKTLDTI 258

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  +      S   E T+E   P S+     +  +K GV RI
Sbjct: 259 YIGGGTPTTLEPHQLERLIGYLQDKLDTSHVKEFTVESGRPDSITREKLKTMKKMGVTRI 318

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++LR +GR H  ++ I + H+AR   F  ++ D+I  LP +T       + 
Sbjct: 319 SVNPQTMRDETLRLIGRRHTVAQLIDSFHMAREEGFDNINMDIILGLPGETAEDVAYTMS 378

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSI 242
                  D L+++ L I++G+   ++  + +L           + +    +++ +   + 
Sbjct: 379 EIKKLDPDDLTVHSLAIKRGSRLAEVLHEKELKGELKVPILESINNTEEMMNIASRGAAE 438

Query: 243 TSAHGLHAY---------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHR 292
            S    + Y         E + ++  G   ++N+         + +G G  ++   G+ R
Sbjct: 439 LSLEPYYLYRQKNISGNFENTGYARKGKAGIYNILINEEVQSIVALGAGTVTKRVYGNGR 498

Query: 293 VAI-SIEKHPESWLKMVRK 310
           +      K  + +++ +++
Sbjct: 499 IERCDNVKDIKMYMENIQE 517


>gi|12004560|gb|AAG44090.1|AF215909_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  212 bits (541), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 28/332 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N+  +Y+H PFC   C YCDF   +       + +++  + E+             +I+
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDFVRKIPSSNEEVDLYLEKIVDEIS-----GFFNKCKTIY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+SL
Sbjct: 57  IGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVSL 114

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  E+ LR L R H       AI+L   +    +S D IY LP   ++     ++  
Sbjct: 115 GVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINESIEFI 174

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y L I+ G++  K ++  D+         D     +++    G   YE+S
Sbjct: 175 KRNNIKHVSFYALEIKDGSIMNKRNEVIDI-----ETEEDQLEHIENVMEKIGYTRYEVS 229

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N S      S HNL YW   D+  IG GA+   K   ++   S       +L   +KN +
Sbjct: 230 NWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQNYGS-------YLNYYKKNQN 282

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                   + +      LMMGLR  +GI +  
Sbjct: 283 W-------NQKDIYLYILMMGLRKIDGIDLNR 307


>gi|114800144|ref|YP_759283.1| coproporphyrinogen III oxidase [Hyphomonas neptunium ATCC 15444]
 gi|114740318|gb|ABI78443.1| oxygen-independent coproporphyrinogen III oxidase [Hyphomonas
           neptunium ATCC 15444]
          Length = 450

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 83/396 (20%), Positives = 147/396 (37%), Gaps = 27/396 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-IS 72
                +  Y+H PFC K C YC   + V         +    L E+       GP   ++
Sbjct: 42  APGEPVSAYLHIPFCEKLCWYCGCATSVPNGYRRVGEYTDLLLKEISLKADAMGPHGGLA 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + FGGG+P+++ P +   + D + +++ +    EI +E +P +++      + +AGVNR
Sbjct: 102 HLHFGGGSPNILSPADFLELADAMRRSFGLREGAEIAVELDPRTMQAGQVAAFARAGVNR 161

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMEL 191
            SLGVQ+L +   + + R       +A I   R +    ++ DL+Y LP QT        
Sbjct: 162 ASLGVQTLADDVQQAINRVQPREMVVALIEDLRGVGIGAINMDLMYGLPYQTTQHVAQAA 221

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           Q A       +S++         F K      +  L           +      A G  A
Sbjct: 222 QFAAEMGAARVSVFGYAHVP--WFAKHQRAINENTLAGIRERFTQARVAAMTLEAAGYVA 279

Query: 251 YEISNHSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIE 298
             + +++                 N+  Y D      IG+G  A S+ + G  +      
Sbjct: 280 IGLDHYARADDALAIAARAGRLRRNFQGYTDDPCATLIGLGATAISQFREGFSQNC---- 335

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLD 355
           K  ++W   ++           L++E +     +  L  +  + V       G    +LD
Sbjct: 336 KDRKAWAGAIQAGRLPSERGIALTAEDRLRAHAIETLMCQLEVDVTAVCAAMGVADDSLD 395

Query: 356 IECE--RNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              E  R L+  G    V  S +   +    ML +V
Sbjct: 396 DALESARALEAVGLC-YVSGSVITVPEEARIMLRTV 430


>gi|126172473|ref|YP_001048622.1| coproporphyrinogen III oxidase [Shewanella baltica OS155]
 gi|160877341|ref|YP_001556657.1| coproporphyrinogen III oxidase [Shewanella baltica OS195]
 gi|125995678|gb|ABN59753.1| Radical SAM domain protein [Shewanella baltica OS155]
 gi|160862863|gb|ABX51397.1| Coproporphyrinogen dehydrogenase [Shewanella baltica OS195]
 gi|315269545|gb|ADT96398.1| Radical SAM domain protein [Shewanella baltica OS678]
          Length = 445

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F   +      Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGHMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRDTFGVNLDTALFKEMTSMKLIGAIKNDPR 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|258592773|emb|CBE69082.1| putative Coproporphyrinogen dehydrogenase [NC10 bacterium 'Dutch
           sediment']
          Length = 458

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/368 (22%), Positives = 149/368 (40%), Gaps = 20/368 (5%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           VH PFC  KC YCDF ++  R     E ++     +++ +  + G  ++ S+ FGGGTPS
Sbjct: 57  VHIPFCRTKCTYCDFLAYYGRSDSEIERYLDLLRQDIRVVAGMAGHVAVESMEFGGGTPS 116

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSS-VEVNNFQGYRKAGVNRISLGVQSLE 141
           L+  + +A I+DG+   +  S + ++T+E  P + +  N   G+++ G+ R+S GVQ L+
Sbjct: 117 LLSVEQVAAIMDGVRARFRFSPDADVTMEVLPDTSITTNLMAGWKREGITRLSFGVQFLD 176

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +   + L R     E +  +   R   F   S DL+  LP+QT   W    Q  L     
Sbjct: 177 DDLKKKLNREDTTEEILRILRSVREAGFDDFSVDLMCGLPEQTEESWRHTCQEILRLHPP 236

Query: 201 HLSLYQLTI-EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           H+ ++ +++  +G   Y         L   + +   Y          G       N    
Sbjct: 237 HVCVFPVSVRHEGIALYN----YRAALLRPSRSRQTYEEAYQFLLEAGYQRTTRHNFRLG 292

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
             +  +          IG+G  + S+ K   ++       H   +   V      +    
Sbjct: 293 KQDFTYERLMADLAPVIGLGAHSISQAKDCIYKNHS----HLGKYETAVSTGEPPLHTGH 348

Query: 320 FLSSEQQADEFL---MMGLRLREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFS 374
               E++   +    +  LRL      KD+    GR+L      E +L  +  + R+  +
Sbjct: 349 IFPEEEKPYNYAVRRIEHLRL----DGKDFAARFGRSLREAFPEEISLLEEFGLARMNGA 404

Query: 375 RLRCTQRG 382
            L  T  G
Sbjct: 405 DLELTPDG 412


>gi|295114805|emb|CBL35652.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [butyrate-producing bacterium SM4/1]
          Length = 395

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 66/311 (21%), Positives = 132/311 (42%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S  + +++     ++ +   EM ++ +    R + ++
Sbjct: 71  ENGYSLYIGIPFCPTTCLYCSFTSFPIGKWQGRTGLYLNALFREMDYVAEKMKGRPLDTV 130

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ + P+++  ILD + + + +    E T+EA  P S+     Q  R  G+ RI
Sbjct: 131 YFGGGTPTSLSPEDLDAILDKVERTFPMDQVKEFTVEAGRPDSITEEKLQVLRNHGITRI 190

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +      LA R  F  ++ DLI  LP++        ++
Sbjct: 191 SINPQTMKQETLDLIGRRHTVEQVKETFRLARRMGFDNINMDLIVGLPEEDEEDVRNTME 250

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +      D L+++ L I++        +   +L +      +D+             + Y
Sbjct: 251 QIKELRPDSLTVHSLAIKRAARLNMFRERYGNLKITGTQEMIDMTARYAREMGMEPYYLY 310

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV--AISIEK 299
                    E   +S  G   ++N+        I   G G  ++V              K
Sbjct: 311 RQKNMAGNFENVGYSVPGKACIYNILIMEEKQTIMACGAGTTTKVVFPRENRLERAENVK 370

Query: 300 HPESWLKMVRK 310
             E +++ + +
Sbjct: 371 EVEQYIERMDE 381


>gi|158320740|ref|YP_001513247.1| coproporphyrinogen III oxidase [Alkaliphilus oremlandii OhILAs]
 gi|158140939|gb|ABW19251.1| Coproporphyrinogen dehydrogenase [Alkaliphilus oremlandii OhILAs]
          Length = 499

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 142/316 (44%), Gaps = 22/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLT--GPRSI 71
               + +Y+  PFC  +C YC F S+  +      + ++ S   E++ +  L     + +
Sbjct: 173 DEKKVSLYISIPFCPTRCLYCSFPSNPMKQSAHLVDVYVNSLCKEIEGVGNLVKEAGKYV 232

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +I+ GGGTP+ +     A I D I KN  ++S  E T+EA  P +++    +  + + V
Sbjct: 233 QTIYIGGGTPTTLNVPQFARIFDAIKKNMDMNSIEEFTVEAGRPDTIDYEKLKFLKDSDV 292

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
            R+S+  Q++ E +LR +GR H+  E + A H+A+   F  ++ D+I  LP +       
Sbjct: 293 TRLSINPQTMNECTLREIGREHSVGEVMVAYHMAKEVGFENINMDIIIGLPGEDEAMVAH 352

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++     A ++L+++ L I++ +   +  +     L  +  A+ +  +TQ      GL 
Sbjct: 353 TMREIERLAPNNLTVHTLAIKRASRLKEQEETY--SLAKDQEAISMLEITQQYAENMGLK 410

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV--A 294
            Y            E   +   G+E ++N+         +G+G GA S+           
Sbjct: 411 PYYMYRQKHMVGNLENIGYGKPGSECIYNIQIMEEKQTILGLGAGATSKFTFPKENRLER 470

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E ++  V +
Sbjct: 471 VPNVKNLEQYISRVDE 486


>gi|220928316|ref|YP_002505225.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998644|gb|ACL75245.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 443

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/383 (21%), Positives = 171/383 (44%), Gaps = 27/383 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y + PFC  +C +C + + +   ++  + ++ +   E++ +   +         ++FGG
Sbjct: 59  LYFNIPFCASRCSFCLYYTKIYEREL-VDRYLDALEKEVEAISNTKYVKSTRFECVYFGG 117

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPSL+  + I  + + + KN+ V+  +EI+ EANPSS+ ++     ++   NRISLG+Q
Sbjct: 118 GTPSLLNEKQIDRVANIVFKNFQVTDELEISFEANPSSLSLDKVMALKRNNFNRISLGIQ 177

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY- 197
           S  ++ L+ +   HN+ EA   I++       ++ DLIY    QT  + +M+L+  L++ 
Sbjct: 178 SFNDKYLKQMNCRHNSKEAKEVINMLLEKGFNVNIDLIYGFQGQTEEELQMDLEEILNFK 237

Query: 198 AVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQS-ITSAHGLHAYEISN 255
            + H+S++ L +   T  Y K+ K  +L + +    +  Y+         +   + E S 
Sbjct: 238 NLHHISIFPLRLVTQTPLYNKLEKQQELNIQAHQNKIVKYHECIDSFFKNNSYISEEESV 297

Query: 256 HSFLGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           H +      H   Y    G  IG G GA + +          +      +++ +     A
Sbjct: 298 HYY--KRGFHPHRYQSLDGRIIGFGSGAGTLLDNVESGNKFDVN----DYIEAINSKNSA 351

Query: 315 VVEKEFLSSEQQADEFLMMGLRLR-------EGISVKDWEMLAGRNLDIECER---NLQR 364
                 ++ EQ  + +++  L          +GI  K +    G ++    E+   +L  
Sbjct: 352 AFADSVITDEQMYERYILYRLLYMNRSLPDLKGIIEKRFSEFYGIDIGDRYEKVIGHLLA 411

Query: 365 QGFIERVQFSRLRCTQRGMTMLD 387
           +  I  +   R+  T +    L+
Sbjct: 412 KKLIV-LDGQRVIFTDK---FLN 430


>gi|225026137|ref|ZP_03715329.1| hypothetical protein EUBHAL_00378 [Eubacterium hallii DSM 3353]
 gi|224956542|gb|EEG37751.1| hypothetical protein EUBHAL_00378 [Eubacterium hallii DSM 3353]
          Length = 489

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 19/312 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC   C YC F S  V R+      ++ +   E+ ++ +    + +++I
Sbjct: 171 EKEYSLYIGIPFCPTTCLYCSFTSFPVSRFGDRMRAYLDALYKELAFVAKHHRDKKLTTI 230

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++ + ++ +++ I + + V  + E T+E   P S+    F+  ++AGV RI
Sbjct: 231 YIGGGTPTALDEECLSKLMNMIHELFPVEESEEFTVESGRPDSITKEKFRILKEAGVTRI 290

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +   A  LAR   F  ++ D+I  LP ++++     L 
Sbjct: 291 SINPQTMHQETLDLIGRAHTVEQTKEAFLLARECGFDNINMDIITGLPGESLSYVHETLD 350

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
                  + L+++ L I++        +        +    ++  L     S  G+ AY 
Sbjct: 351 EIFKLRPESLTVHSLAIKRAAHLN--IEMEKYQGMVKGSTNEMLRLVDEYASNMGMEAYY 408

Query: 252 -----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRV-AISIE 298
                      E   +     E L+N+       D I  G GA S+      R+      
Sbjct: 409 MYRQKNIPGNLENIGYCVPDKECLYNILIMEEKQDIISCGAGASSKYVFEQGRIERTENV 468

Query: 299 KHPESWLKMVRK 310
           K+ + ++  + +
Sbjct: 469 KNLDHYINRIDE 480


>gi|296536884|ref|ZP_06898929.1| oxygen-independent coproporphyrinogen III oxidase [Roseomonas
           cervicalis ATCC 49957]
 gi|296262785|gb|EFH09365.1| oxygen-independent coproporphyrinogen III oxidase [Roseomonas
           cervicalis ATCC 49957]
          Length = 441

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 77/396 (19%), Positives = 144/396 (36%), Gaps = 23/396 (5%)

Query: 5   SAYENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + Y   ++G    ++L +YVH PFC   C YC  ++ V R       +    L E   + 
Sbjct: 32  AEYRAWLSGIAPGDALSLYVHIPFCRSLCWYCGCHTAVTRLPARLARYTDGLLAEAALLA 91

Query: 64  QLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                   +S++  GGGTPS I  + ++ +L  +  ++    N E+ IE +P  +     
Sbjct: 92  AALPAHGGVSALHLGGGTPSAIGAEGLSRLLAALRAHFPFRDNAELAIELDPRVLTPVIA 151

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPK 181
               + G+ R SLGVQ ++ +    +GR   + +   A+ L R      ++ DL+Y LP 
Sbjct: 152 DALAEGGITRASLGVQDIDPEVQARIGRIQPSEQVARAVALLRERGIGAINLDLMYGLPG 211

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q + + E   + A     D ++++        +    +      LP     +       +
Sbjct: 212 QGVAEAEASARFAAELGADRVAVFGYAHVP-WMKPAQNAIDARQLPGAEARLAQAEAAAA 270

Query: 242 ITSAHGLHAYEISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVG 289
           +  A G     + + +          A      N+  Y        +G+G  +  R+  G
Sbjct: 271 VLEAAGYRRIGLDHFARPEDPMARAAAAGALRRNFQGYTTDAAPVLLGLGASSIGRLPAG 330

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             +           WL  +     AV     L+ E +    L+  L     + ++     
Sbjct: 331 FAQNIA----DERGWLAEIEAGRLAVARGRALTEEDRQRASLIERLMCDLALPLRAVPE- 385

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           A           L   G +   +  RL  T+R   +
Sbjct: 386 AVLAAARPRLEPLLADGVLAERE-GRLEVTER-RFL 419


>gi|323143621|ref|ZP_08078298.1| radical SAM domain protein [Succinatimonas hippei YIT 12066]
 gi|322416684|gb|EFY07341.1| radical SAM domain protein [Succinatimonas hippei YIT 12066]
          Length = 406

 Score =  212 bits (540), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 6/287 (2%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFG 77
             Y++ PFC  +C +C F     + +  +  +  + + E++     +    + I +++ G
Sbjct: 119 AAYINVPFCQTRCAFCMFYIGAYKPEESK-RYTDALIKEIRMWQGSKALEDKPIHAVYMG 177

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +E  ++  I+    +   +S++ E T+E   S  +    +   KAG NR SLGV
Sbjct: 178 GGTPTALEACDLERIITTCREVLPLSNDYEFTVEGRLSFFDDEKIEACLKAGANRFSLGV 237

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ + +  + +GR     E I  +          +  DLI+ LP QT T W  +L    S
Sbjct: 238 QTFDTEIRQSVGRLSTKDELIRGLENLSAYDESSVVIDLIFGLPGQTETTWREDLDIVSS 297

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +  + LYQL + +G+   K+ K G     P      ++Y +  +           +S+
Sbjct: 298 LPIHGVDLYQLILLEGSPLQKLIKAGKYKYAPDNRERAEMYRIGCNAMEKAHWKQLSVSH 357

Query: 256 HSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
                 E +L+N+      D +  GPGA  +++  S       E +P
Sbjct: 358 FGRNTRERNLYNVLAKSDADTLAFGPGAGGKIQGLSFMNTRKYELYP 404


>gi|12004562|gb|AAG44091.1|AF215910_1 species protein 1 [Mycoplasma iowae]
 gi|12004564|gb|AAG44092.1|AF215911_1 species protein 1 [Mycoplasma iowae]
 gi|12004568|gb|AAG44094.1|AF215913_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 28/332 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N+  +Y+H PFC   C YCDF   +       + +++  + E+             +I+
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDFVRKIPSSNEEVDLYLEKIVDEIS-----GFFNKCKTIY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+SL
Sbjct: 57  IGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVSL 114

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  E+ LR L R H       AI+L   +    +S D IY LP   ++     ++  
Sbjct: 115 GVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINDSIEFI 174

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y L I+ G++  K ++  D+         D     +++    G   YE+S
Sbjct: 175 KRNNIKHVSFYALEIKDGSIMNKRNEIIDI-----ETEEDQLEHIENVMEKIGYTRYEVS 229

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N S      S HNL YW   D+  IG GA+   K   ++   S       +L   +KN +
Sbjct: 230 NWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQNYGS-------YLNYYKKNQN 282

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                   + +      LMMGLR  +GI +  
Sbjct: 283 W-------NQKDIYLYILMMGLRKIDGIDLNK 307


>gi|257413255|ref|ZP_04742489.2| oxygen-independent coproporphyrinogen III oxidase 2 [Roseburia
           intestinalis L1-82]
 gi|257204080|gb|EEV02365.1| oxygen-independent coproporphyrinogen III oxidase 2 [Roseburia
           intestinalis L1-82]
          Length = 511

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 25/318 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+    +K   + ++ +   E+ +       + ++SI
Sbjct: 184 DNGYSLYIGIPFCPTTCLYCSFTSYPLVSWKNRVDAYLDALEKEIDYTAAKFYHKHLNSI 243

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP  +  ++  I  ++ +S  +E T+EA  P S+     +   K G+ RI
Sbjct: 244 YIGGGTPTTLEPYQLDRLIRKIKCSFDLSDCLEFTVEAGRPDSITREKLEVLHKWGITRI 303

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H+  + + +  +AR   F  ++ DLI  LP++++      L+
Sbjct: 304 SINPQTMQQRTLDLIGRRHSVEQTVESFKIARELGFDDINMDLIMGLPEESLEDVRDTLE 363

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           + +    D+L+++ L +++        +D               +LT S      L  Y 
Sbjct: 364 QIMQLKPDNLTVHSLALKRAARLNMFKEDYKDYKMVNTQE--HMDLTASYAKKMDLFPYY 421

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV------KVGSHRV 293
                      E   ++  G   ++N+        I   G GA ++         G+HR+
Sbjct: 422 LYRQKGMAGNLENVGYAKEGKAGVYNILIMEEKQTIVACGAGASTKRVWTEPNPDGTHRI 481

Query: 294 AI-SIEKHPESWLKMVRK 310
                 K    +++ + +
Sbjct: 482 ERCENVKDVGQYIERIDE 499


>gi|28210562|ref|NP_781506.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
 gi|28202999|gb|AAO35443.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 460

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 169/373 (45%), Gaps = 17/373 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             + G+Y+H PFC   CPYC +N  V   K   +++  S + E++  ++    ++I+S++
Sbjct: 69  DENTGIYIHIPFCKSICPYCPYNK-VLYEKEKAKDYKNSLMKEIKMYKKYLKNKNITSLY 127

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+L+    +  +++ I   +  + N  I IE  P+ V        +  GVN +SL
Sbjct: 128 IGGGTPTLL-VDELNEVINYIKDEFEFNGN--IGIEIYPTEVSEELLTKLKSLGVNLLSL 184

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  +  L+FLGR +   +   A+       F  +  D++  LP QT+   E +L++ 
Sbjct: 185 GVQTFNDDKLKFLGRKYTVKDIENALEKIEKFNFKCVDIDIMTNLPGQTIEDIEQDLRKV 244

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            SY +  LS+Y L +   T   K+ ++  L   SE     + N+   ++   G   YE S
Sbjct: 245 YSYNIHQLSIYPLIVFPMTPMDKIIREKKLKRFSELGERKILNIIDKVSKECG---YERS 301

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +    G    +         +IGIG GA S      +    ++    E ++K++ +N   
Sbjct: 302 SIWTYGKSEDNRYTSVTRESFIGIGAGASSLFSNYFYLNTFNV----EEYIKVLNENKLP 357

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNL--DIECERNLQRQGFIERV 371
           +     +S+ ++   ++    R  +G I    +  L  +++  +     N  +   + + 
Sbjct: 358 INIVNTMSNREKMIFWIFW--RCYDGIIDKNRFYKLFNKDIKKEFRLLFNFLKIFSMSKE 415

Query: 372 QFSRLRCTQRGMT 384
           +  ++  T+ G  
Sbjct: 416 EVDKIYLTELGRF 428


>gi|154505864|ref|ZP_02042602.1| hypothetical protein RUMGNA_03406 [Ruminococcus gnavus ATCC 29149]
 gi|153793882|gb|EDN76302.1| hypothetical protein RUMGNA_03406 [Ruminococcus gnavus ATCC 29149]
          Length = 476

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/315 (22%), Positives = 136/315 (43%), Gaps = 24/315 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             +YV  PFC   C YC F+S     +K   ++++++   E++ + +    R +++I+ G
Sbjct: 152 FSLYVGIPFCPSICSYCSFSSSPLAEWKDRVDDYLKALCQEIRALGERAEERKLNTIYIG 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+ +E + +  +LD I K+++     E TIEA  P S+     +  R+  V RIS+ 
Sbjct: 212 GGTPTTLEAEQLFELLDTIQKSFSFEYLQEFTIEAGRPDSITREKLEVMRRFPVTRISVN 271

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            Q++++++L  +GR H   +     H AR   F  ++ DLI  LP +T       L +  
Sbjct: 272 PQTMQQKTLDLVGRKHTVQDVKDIFHAARELGFDNINMDLIAGLPGETAEDMRDTLCQIE 331

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY---- 251
             + D L+++ L I++   F +  +  DL        V+              + Y    
Sbjct: 332 ELSPDSLTVHALAIKRAAKFGQEQRKIDLHS-EIEQMVEESARAAERMGLVPYYLYRQKN 390

Query: 252 -----EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--------KVGSHRVAISI 297
                E   ++ +    ++N+         +  G GA +++          G     I I
Sbjct: 391 IAGNFENVGYAKVDKAGIYNILIMEEKQTILAAGAGASTKIVLPEKIRLDNGRETNLIRI 450

Query: 298 E--KHPESWLKMVRK 310
           E  K+   +   + +
Sbjct: 451 ENVKNITEYESRIDE 465


>gi|269139140|ref|YP_003295841.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
 gi|267984801|gb|ACY84630.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
 gi|304559064|gb|ADM41728.1| Radical SAM family protein HutW [Edwardsiella tarda FL6-60]
          Length = 466

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 143/373 (38%), Gaps = 13/373 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFGG 78
           VYVH PFC   C +C F  + R  +     +      E+     L       I +I+ GG
Sbjct: 56  VYVHIPFCATHCTFCGFYQN-RFSEQAVARYCDYLQREIALESALPLQQSAPIHAIYLGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTPS +  + +  ++  +     ++++ EIT+E    + +         AG NR S+G+Q
Sbjct: 115 GTPSALSAEQLYRLITQLRSALPLAADGEITVEGRVLNFDDARIDACLAAGANRFSIGIQ 174

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + + +  + +GR  +   AIA +  LA      +  DL++ LP QT  +W+ +L      
Sbjct: 175 TFDTRLRQRMGRRADRDRAIAFLRALAERDRAAVICDLMFGLPGQTAREWQNDLDIVNDL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D + LY L +   T   K   +    +         Y          G      S+ +
Sbjct: 235 PLDGVDLYALNLLPSTPLAKAVANARTRVADAAERQSFYLHALDELDKRGWRQLSNSHWA 294

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E +L+NL   +  D +  G GA   +   S+     +++  E++ + +      ++
Sbjct: 295 RTTRERNLYNLLIKQGADCLAFGSGAGGHLDGQSYM----LQRSLEAYYQRLDAAEKPLM 350

Query: 317 EKEFLSSEQQADEFL---MMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
                + + +    L   +   RL     + D   L      +      Q    + R++ 
Sbjct: 351 MLSAPAPQHRWRLALQGGIETGRLDLATLLDDPTPLLPLLPLLPLLLQWQSCDLL-RLRD 409

Query: 374 SRLRCTQRGMTML 386
             L  T RG    
Sbjct: 410 HCLTLTPRGRFWA 422


>gi|296390084|ref|ZP_06879559.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAb1]
          Length = 318

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 7/266 (2%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +  + L +YVH PFC   C YC  N  + + +     ++   + E++
Sbjct: 38  FDQLHALRDS--RKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIE 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + R L+  + +  + FGGGTP+ + P  +  ++  +  +  +    + +  IE +P   
Sbjct: 96  IVSRHLSREQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREA 155

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           + +     R+ G NR+SLGVQ  + +  + + R     E    +  AR + +  ++ DLI
Sbjct: 156 DWSTMGLLRELGFNRVSLGVQDFDMEVQKAVNRMQTPEETRTIVEAARTLQYRSINLDLI 215

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y LPKQT   +   +   ++   D LS++           +   + D  LPS    +++ 
Sbjct: 216 YGLPKQTPDSFARTVDEVIALQPDRLSVFNYAHLPERFMPQRRINAD-DLPSPGQKLEML 274

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE 262
             T    +A G     + + +    E
Sbjct: 275 QRTTEQLAAAGYRYIGMDHFALPDDE 300


>gi|12004558|gb|AAG44089.1|AF215908_1 species protein 1 [Mycoplasma iowae]
          Length = 349

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/332 (27%), Positives = 146/332 (43%), Gaps = 28/332 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +N+  +Y+H PFC   C YCDF   +       + +++  + E+             +I+
Sbjct: 2   NNTKHLYIHIPFCKHICTYCDFVRKIPSSNEEVDLYLEKIVDEIS-----GFFNKCKTIY 56

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +   N+ ++L  + KN  + S  E TIE NP  V  +     +   VNR+SL
Sbjct: 57  IGGGTPNFLSDHNLDILLSSLQKN--IDSQTEFTIELNPEFVTESQVNILKNNNVNRVSL 114

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  E+ LR L R H       AI+L   +    +S D IY LP   ++     ++  
Sbjct: 115 GVQTTNEKILRLLNRKHTNIVVEKAINLLYKHNINNVSCDFIYNLPLLKISDINESIEFI 174

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               + H+S Y L I+ G++  K ++  D+         D     +++    G   YE+S
Sbjct: 175 KRNNIKHVSFYALEIKDGSIMNKRNEVIDI-----ETEEDQLEHIENVMEKIGYTRYEVS 229

Query: 255 NHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           N S      S HNL YW   D+  IG GA+   K   ++   S       +L   +KN +
Sbjct: 230 NWSIDKKYFSKHNLAYWDLEDWKAIGIGAYGFEKNVYYQNYGS-------YLNYYKKNQN 282

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                     +      LMMGLR  +GI +  
Sbjct: 283 WK-------QKDIYLYILMMGLRKIDGIDLNK 307


>gi|301168406|emb|CBW27996.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacteriovorax marinus SJ]
          Length = 373

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 165/384 (42%), Gaps = 32/384 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS 73
            +Y+H+PFC   C YCDF  ++       Y   + + ++ +    Q  +R      S+++
Sbjct: 8   SLYIHFPFCRHLCNYCDFYKNIPVDKELEYGEFETSLVEGYSELEQFLLRNNCEISSLNT 67

Query: 74  IFFGGGTPSLIEPQNIALILD-GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTPSL   +    + +  + +N  +SS  E T+E NP +        ++ +GVNR
Sbjct: 68  LYLGGGTPSLWGVRGAEFLKNFLLERNIKLSSTCEFTLEVNPGAWTREALSSWQSSGVNR 127

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEME 190
            SLG+QSL+   L+ + R H+  +    +          S D +  LP           E
Sbjct: 128 YSLGIQSLDANFLKVIDRVHSIDDVYETLKFFHEHNLSFSVDFMLGLPFSEKYNRDILKE 187

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  L YA +H+SLY LT + G             LPSE      Y    +     G   
Sbjct: 188 LEEILDYAPEHISLYILTTKAG-------YIHRDHLPSEEYIEKEYLDVANFLRGKGFDH 240

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YE+SN +  G ES HNL YWR      +G  A   +K  + R    + +    +      
Sbjct: 241 YEVSNFAKKGKESRHNLQYWRSESVAALGASATGYLKEAATRFKWKVLE--SKY------ 292

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
                 ++E L+ ++   E + MGLR+ +   +     +       +   + ++  +++ 
Sbjct: 293 ------KEEILTEDELRLEEIYMGLRINQLYDLSL--QIEDLKTLEQVISHWEKSSYLKE 344

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
               +L    RG  +LDS++ +L 
Sbjct: 345 RVGYKLSLNSRGFLLLDSLMNDLF 368


>gi|157377544|ref|YP_001476144.1| coproporphyrinogen III oxidase [Shewanella sediminis HAW-EB3]
 gi|157319918|gb|ABV39016.1| Coproporphyrinogen dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 445

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 152/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  F+ S   EM  ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSFCTFHRFIFKEDKARAYFV-SLRKEMDMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILAMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQYDLDMAAKL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAPQGDMARQYRQILNSLNGQYN----QLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F    +     Y   Y +Y+G+G G+ S +    +    S+ K+ E+    +      V 
Sbjct: 289 FGKTNNEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNNFSLRKYQEN----IAAGRMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKVIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|323693059|ref|ZP_08107279.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           symbiosum WAL-14673]
 gi|323502940|gb|EGB18782.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           symbiosum WAL-14673]
          Length = 485

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 23/324 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC   C YC F S  + +++   + ++ +   EM ++ +    R + ++
Sbjct: 164 EKGYSLYIGIPFCPTTCLYCSFTSFPIGKWEGKTKLYLDALFREMDYVAEKMKGRPLDTV 223

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ + P ++  +L  +   +      E T+EA  P S+     +  RK G+ RI
Sbjct: 224 YFGGGTPTSLNPGDLDALLCKVEAAFLTDKVREFTVEAGRPDSITQEKLEVLRKHGITRI 283

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +     HLAR   F  ++ DLI  LP++T+   +  ++
Sbjct: 284 SINPQTMNQKTLDLIGRRHTVEDVREKFHLARGLGFDNINMDLIVGLPEETLCDVKNTME 343

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
              + A D ++++ L I++                      ++ ++T   T   G++ Y 
Sbjct: 344 EIKALAPDSVTVHSLAIKRAARLN--MFKERYGNLKIENTQEMIDMTARYTEEMGMNPYY 401

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV--KVGSHRVAISI 297
                      E   ++  G E ++N+        I   G G  ++V     +       
Sbjct: 402 LYRQKNMAGNFENVGYAAPGKECIYNILIMEEKQTIMACGAGTTTKVLYPSENRIERAEN 461

Query: 298 EKHPESWLKMVRKNGHAVVEKEFL 321
            K  E ++  V   G  +  KE L
Sbjct: 462 VKEVEQYISRV---GEMMERKERL 482


>gi|225548082|ref|ZP_03769367.1| hypothetical protein RUMHYD_00061 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040758|gb|EEG51004.1| hypothetical protein RUMHYD_00061 [Blautia hydrogenotrophica DSM
           10507]
          Length = 494

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/311 (20%), Positives = 134/311 (43%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F+S+  + ++     ++Q+   E+  +  +   R + ++
Sbjct: 171 ENGYSLYIGIPFCPSICLYCSFSSYPYKQWEKRAGEYVQALKREIWAVAGMMKNRKLDTV 230

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P+ +  +L  I + +   S  E T+EA  P S+     +  R+  V+RI
Sbjct: 231 YMGGGTPTTLPPEYLDEVLTCIEEAFPCESLHEYTVEAGRPDSLTREKLEAVRRHPVSRI 290

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   E I A  LAR+  F  ++ DLI  LP +   +    L+
Sbjct: 291 SVNPQTMNDKTLEVIGRRHTVRETIDAFKLARDCGFDNINMDLIVGLPGEGKEEVAHTLE 350

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-TSAHGLHAY 251
                + D L+++ L +++        +    +    N  +       +        + Y
Sbjct: 351 EIQKLSPDSLTVHSLAVKRAARLNMFREQYQEMTFENNQEIMDMTAWCAYEMGMGPYYLY 410

Query: 252 ---------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV--KVGSHRVAISIEK 299
                    E   ++ +    ++N+         I +G G  +++    G     +   K
Sbjct: 411 RQKNMAGNFENVGYAKVDKAGIYNILIMEEKQPIIALGAGGSTKLVFDHGRRIERVENVK 470

Query: 300 HPESWLKMVRK 310
              ++++ + +
Sbjct: 471 DVANYIERIDE 481


>gi|266623549|ref|ZP_06116484.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           hathewayi DSM 13479]
 gi|288864649|gb|EFC96947.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           hathewayi DSM 13479]
          Length = 485

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 16/308 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
             +YV  PFC   C YC F S  ++ ++   + ++ +   EM ++ +    R++ +++FG
Sbjct: 167 YSLYVGIPFCPTTCLYCSFTSFPIKSWEKRMDEYLTALFKEMDYVAETMAGRTLDTVYFG 226

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+ +  +++  +++ +   +  S   E T+EA  P S+  +  +     GV RIS+ 
Sbjct: 227 GGTPTSLSAEHLERVMEKLKATFDFSEVKEFTVEAGRPDSITEDKLKVLLDYGVTRISIN 286

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            Q++++++L  +GR H          LAR   F  ++ DLI  LP++ +      ++   
Sbjct: 287 PQTMKQETLDLIGRRHTVDLVKEKYRLAREMGFDNINMDLIIGLPEEDLEDVRRTMEEIK 346

Query: 196 SYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY--- 251
           +   D ++++ L I++         K GDL + +    +DL             + Y   
Sbjct: 347 ALDPDSITVHSLAIKRAARLNMFKEKYGDLKITNTQEMIDLTAAYAREMGQEPYYLYRQK 406

Query: 252 ------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV--AISIEKHPE 302
                 E   +S  G   ++N+        I   G G  ++V          +   K  E
Sbjct: 407 NMAGNFENVGYSRPGKACIYNILIMEEKQTIAACGAGTTTKVVFPRENRLERVENVKDVE 466

Query: 303 SWLKMVRK 310
            ++  + +
Sbjct: 467 QYISRIDE 474


>gi|167767124|ref|ZP_02439177.1| hypothetical protein CLOSS21_01642 [Clostridium sp. SS2/1]
 gi|167711099|gb|EDS21678.1| hypothetical protein CLOSS21_01642 [Clostridium sp. SS2/1]
 gi|291559547|emb|CBL38347.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [butyrate-producing bacterium SSC/2]
          Length = 476

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 141/308 (45%), Gaps = 13/308 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC   C YC F S+ + +++   ++++++ L E+ ++ +    + + ++
Sbjct: 159 KEGYSLYIGIPFCPSTCLYCSFTSYSINQFENIVQDYLEALLKELDFVAKTYAHKELQTM 218

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++ +++  +L  + K +  S   EIT+EA  P S+     +  +K GV RI
Sbjct: 219 YIGGGTPTSLKEEDLEYLLYEVNKRFPFSKIQEITVEAGRPDSLNFEKLKILKKYGVTRI 278

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+ +++L+ +GRNH A +     +LAR      ++ D+I  LP++ M +    L 
Sbjct: 279 SINPQSMNDKTLKLIGRNHFAQDIKEKFNLARQAGIDNINMDMICGLPEEGMEELSYTLD 338

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA-- 250
                  + ++++ L +++ +   +M          E V+             + L+   
Sbjct: 339 EIKKLDPESVTVHALAVKRSSRLNRMKDTYHFGASEEMVSYAASCARDMNMEPYYLYRQK 398

Query: 251 -----YEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISIEKHPE 302
                 E    S  G E L+N+       D I +G G  S++  +       I   K  +
Sbjct: 399 NIPGNLENVGFSKKGKECLYNILIMEELHDIIAVGAGTSSKIVHQEDHQVDRIENLKDIK 458

Query: 303 SWLKMVRK 310
            ++  + +
Sbjct: 459 QYITRIDE 466


>gi|258516508|ref|YP_003192730.1| coproporphyrinogen III oxidase [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780213|gb|ACV64107.1| Coproporphyrinogen dehydrogenase [Desulfotomaculum acetoxidans DSM
           771]
          Length = 509

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/328 (21%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQ 60
           K+L A       Q   ++ +Y+  PFC  +C YC F ++ V+++K   E ++ + + E++
Sbjct: 161 KFLPA-----NTQAEKTVSIYIGIPFCPTRCLYCSFTAYPVKKFKAWVEPYLNALIKEIK 215

Query: 61  WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
              +       S+ +I+FGGGTP+ I P+ +A +L+           +E+T+E   P ++
Sbjct: 216 ETGRALKENGLSVQTIYFGGGTPTSINPEQLASLLNNANSCLRGPQTIEVTMEGGRPDTL 275

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                     AGV+R+S+  Q++ +Q+L+ +GRNH+  +   A+  AR   FP ++ D+I
Sbjct: 276 TEEVLHICSAAGVDRLSINPQTMLDQTLKLIGRNHSVEDIYRAMQSARAAGFPVINMDII 335

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
             LP +  T     ++       ++L+++ L ++  +L  +     ++  P+    + ++
Sbjct: 336 VGLPGENETSVMQTIELLKPLKPENLTVHALALKNASLLKQEIAQHNM--PAAKEVLKMW 393

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
            + Q      G+  Y            E   ++  G E ++N+         IG+G G  
Sbjct: 394 EIAQKGCGDMGMLPYYLYRQKRITGNLENIGYALPGKECIYNIQMIEERQTIIGLGTGGS 453

Query: 284 SRVKVGSHRV-AISIEKHPESWLKMVRK 310
           S++     +       K P  +++ + +
Sbjct: 454 SKLVQADKQHLNRYNPKDPLLYIERIDE 481


>gi|254475802|ref|ZP_05089188.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
 gi|214030045|gb|EEB70880.1| oxygen-independent coproporphyrinogen III oxidase [Ruegeria sp.
           R11]
          Length = 445

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/415 (18%), Positives = 159/415 (38%), Gaps = 40/415 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++LS+         + S+ +Y+H PFC K C +C + +   +      +++++   E+  
Sbjct: 40  QWLSSI------PANGSISIYLHVPFCRKLCWFCAYRTQSSQSDGPIRSYVEALKREISL 93

Query: 62  MRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           + Q L    ++S + FGGGTP+++     + +   +     ++S+ E  +E +P+ V+++
Sbjct: 94  VLQSLPPGTTVSRLHFGGGTPTILPADVFSDLCATLTSAIPLASDYEFAVEVDPNDVDLD 153

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
                + AGVN +S+G+Q  + +    +GR  +     A +  L  +   +++FD++Y L
Sbjct: 154 RVAALQAAGVNSVSMGIQDFDPEVQAAIGRTLSFDRVSAVVEDLRAHHIGQLTFDVLYGL 213

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT  +    LQ  LS + D  S+   +        +        LP     + L+   
Sbjct: 214 PHQTGPRLTDTLQMLLSLSPDRFSVCNYSHVPALA-RRQSMIPSEALPPPPDRLRLFETA 272

Query: 240 QSITSAHGLHAYEISNHSFLGAE-------SLHNLNYWRYGD-----YIGIGPGAHSRVK 287
           + +    G     + + S                 ++  Y D      IG+G  A SR  
Sbjct: 273 ERLLQWDGYQPIGMDHFSRPEDRLAIANRLGRLRRDFRGYSDDPNDVLIGLGASAVSRFP 332

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR---EGISVK 344
            G  +  IS       + + +    HA        ++ +    ++  L       G S+ 
Sbjct: 333 QGYCQNEISTS----GYEQAIAGGHHATTRGHVFKNDDRLRGEMIERLLCDLHLSGTSLA 388

Query: 345 DWEMLAGRNLDIECERNLQRQ---GF---IERVQFSRLRCTQRGMTMLDSVIANL 393
                   ++ +        Q   G    ++R +   +            + + L
Sbjct: 389 R-----DLDMPVAVLNLYLDQIATGLSEMLQRDEHG-IAIKPEARPFARMIASRL 437


>gi|197303674|ref|ZP_03168711.1| hypothetical protein RUMLAC_02401 [Ruminococcus lactaris ATCC
           29176]
 gi|197297194|gb|EDY31757.1| hypothetical protein RUMLAC_02401 [Ruminococcus lactaris ATCC
           29176]
          Length = 481

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/317 (22%), Positives = 141/317 (44%), Gaps = 22/317 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S    +YV  PFC   C YC F+S  V  +K   + ++ + + E++ + ++ G R   ++
Sbjct: 154 SEGFSLYVGIPFCPSICSYCSFSSSPVGEWKDKIDAYLDALIKELKALGRMAGERKPDTV 213

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  I   + +S   E T+EA  P S+     +  R+  V RI
Sbjct: 214 YVGGGTPTTLEAGQLDRLLGTIRNCFDLSELKEFTVEAGRPDSITREKLEVIRRYPVTRI 273

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   E      +AR   F  ++ DLI  LP +T    +  L+
Sbjct: 274 SVNPQTMQQKTLDLVGRKHTVEEVERIFCMARKLGFDNINMDLIAGLPGETRVDMQDTLR 333

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-TSAHGLHA- 250
           R  + A D L+++ L I++   F +  +  DL      +  D     + +    + L+  
Sbjct: 334 RIKALAPDSLTVHALAIKRAAKFGQEGRTMDLHSEISGMVEDAAECAEEMGLKPYYLYRQ 393

Query: 251 ------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR----------V 293
                 +E   ++ +    ++N+         +  G GA +++ +              +
Sbjct: 394 KNIAGNFENVGYAEVDKAGIYNILIMEEKQTILAAGAGASTKLVLPEKIQTAGGKKTNLI 453

Query: 294 AISIEKHPESWLKMVRK 310
            I   K+   ++  + +
Sbjct: 454 RIENVKNIMEYIHRIDE 470


>gi|268611138|ref|ZP_06144865.1| coproporphyrinogen III oxidase [Ruminococcus flavefaciens FD-1]
          Length = 498

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/310 (22%), Positives = 142/310 (45%), Gaps = 14/310 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSI 71
              ++ +YV  PFC  +C YC F SH     +    ++I +   E++ +  L       I
Sbjct: 168 DRKAVSLYVSIPFCPTRCSYCSFVSHSMDSAIKLMPDYINALCRELKIIGDLVKETDTKI 227

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +I+FGGGTP+ I   ++ +I+  +  N+ + +  E ++EA  P ++     +  ++ G 
Sbjct: 228 DTIYFGGGTPTSISADDLRMIMQTVQDNFDLDNVREYSVEAGRPDTITEEKLRVIKEYGA 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q+L +  L+ +GR H+  +A+ A  LAR   F  ++ DLI  LP +    +  
Sbjct: 288 DRISVNPQTLNDDVLKVIGRKHSGEDALRAFELARKVGFDNINTDLIAGLPTEQFDSFRN 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS-ITSAHGL 248
            L + +  + + ++++ LTI++    ++   +      +E V   +  L  +     +  
Sbjct: 348 TLDKMIELSPESITVHTLTIKRSATLFEKGSENAANPAAEMVRYSVDALMDNGYLPYYMY 407

Query: 249 HA------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV-AISIEKH 300
                    E   ++  G ES +N+         +G G  A +++    +++  I   K 
Sbjct: 408 RQKNTVDNLENVGYAKKGFESYYNIFIMDETQTILGAGCAASTKLVYPDNKIVRIHNYKF 467

Query: 301 PESWLKMVRK 310
           P  +++   K
Sbjct: 468 PYEYIRSFDK 477


>gi|307295156|ref|ZP_07574995.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
 gi|306878659|gb|EFN09878.1| oxygen-independent coproporphyrinogen III oxidase [Sphingobium
           chlorophenolicum L-1]
          Length = 435

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 142/391 (36%), Gaps = 27/391 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
           +  ++L +Y+H P+C   C YC  N+           +++S   E+  +  +L G   + 
Sbjct: 42  EKDDALSLYIHIPYCHDICWYCGCNTGAANRVQRLTAYVESLEREIATVAARLNGHGRVR 101

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I FGGG+P+ +   +   +L  +   +  + + E+++E +P  ++          GV+R
Sbjct: 102 RIAFGGGSPNSLPLVDFVRLLQQLLLCFD-AHHAELSVELDPRRLDGQWISTMAAMGVDR 160

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           ++LGVQ+        +GR         A+   R+      FDL+Y LP Q        LQ
Sbjct: 161 VNLGVQTFTPHVQARIGRIQPLDMVERAVDQLRSAGIATGFDLMYGLPGQMQDDLAATLQ 220

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A++     ++L+        L  +  +     LP       +      + +  G  A  
Sbjct: 221 AAIAMQPARIALFGYAHMPR-LLPRQRRIDASDLPDLPTRFAMAAQGHEMLTGAGYRAIG 279

Query: 253 ISNHSFL-------GAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
             + +           +     N+  + D      +G+G  A S+       + +  EK 
Sbjct: 280 FDHFALPEDGMARAARDGTLRRNFQGFTDDPADILLGLGASAISQFPD----LIVQNEKQ 335

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              W  M              ++E +    ++  L  +        E   G    +    
Sbjct: 336 AGPWRAMADAGQLTATRGTLRTAEDRRRARIIEALLCQG-------EGHVGTAHPLPDLS 388

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             ++ G + R+   R+  T+  +    S+ A
Sbjct: 389 RFEQLGLV-RLSEGRVALTRDALPYARSIAA 418


>gi|317498120|ref|ZP_07956422.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894597|gb|EFV16777.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 476

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 141/308 (45%), Gaps = 13/308 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +Y+  PFC   C YC F S+ + +++   ++++++ L E+ ++ +    + + ++
Sbjct: 159 KEGYSLYIGIPFCPSTCLYCSFTSYSIDQFENIVQDYLEALLKELDFVAKTYAHKELQTM 218

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++ +++  +L  + K +  S   EIT+EA  P S+     +  +K GV RI
Sbjct: 219 YIGGGTPTSLKEEDLEYLLYEVNKRFPFSKIQEITVEAGRPDSLNFEKLKILKKYGVTRI 278

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+ +++L+ +GRNH A +     +LAR      ++ D+I  LP++ M +    L 
Sbjct: 279 SINPQSMNDKTLKLIGRNHFAQDIKEKFNLARQAGIDNINMDMICGLPEEGMEELSYTLD 338

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA-- 250
                  + L+++ L +++ +   +M          E V+             + L+   
Sbjct: 339 EIKKLDPESLTVHALAVKRSSRLNRMKDTYHFGASEEMVSYAASCARDMNMEPYYLYRQK 398

Query: 251 -----YEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISIEKHPE 302
                 E    S  G E L+N+       D I +G G  S++  +       I   K  +
Sbjct: 399 NIPGNLENVGFSKKGKECLYNILIMEELHDIIAVGAGTSSKIVHQEDHQVDRIENLKDIK 458

Query: 303 SWLKMVRK 310
            ++  + +
Sbjct: 459 QYITRIDE 466


>gi|304440197|ref|ZP_07400087.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304371246|gb|EFM24862.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 450

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 150/324 (46%), Gaps = 30/324 (9%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +   ENN+     +++ +Y H PFC   C YC F ++    K   + +I + + E + + 
Sbjct: 130 IVKLENNIFSNKRSNISLYFHIPFCPSICSYCSFTTYKT-DKNKMDIYIDNLIKEFKSVN 188

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNF 122
           +   P   +SI+ GGGTP+ ++  N+  +L  I     +  N E T+E   P +++    
Sbjct: 189 KEIIP---TSIYIGGGTPTALDNYNLERLLYEIQNKIDI--NCEYTVECGRPDTIDEKKL 243

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +K GVNRIS+  Q++++++L+ +GR H+  + + A +LA++    ++ DLI  LP +
Sbjct: 244 DILKKYGVNRISINPQTMKDETLKTIGRTHSTEDILIAYNLAKDKGFIINMDLIVGLPDE 303

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T+      L++ +    ++++++ L+I+ G+  YK +K             D ++L ++I
Sbjct: 304 TIDDVNNSLEKIIELNPENITVHSLSIKNGSRLYKENKFY--------STSDSFDLIKTI 355

Query: 243 TSAHGLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVG 289
            + +    Y            E    S  G E ++N          +G G  A +++   
Sbjct: 356 MAENNYFPYYLYRQKRMVDSGENIGFSKKGFECIYNSIMIEEVESILGFGVSASTKILNR 415

Query: 290 SHRVAIS--IEKHPESWLKMVRKN 311
            +         +   ++   V ++
Sbjct: 416 KNLKFKQHLNFRDLITYNSRVEED 439


>gi|253578283|ref|ZP_04855555.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850601|gb|EES78559.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 395

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/313 (21%), Positives = 134/313 (42%), Gaps = 20/313 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F+S+  + ++   + ++++   E++    +   R + +I
Sbjct: 72  ENGYSLYIGIPFCPSICLYCSFSSYPLKVWEKRTDEYVEALCREVRETALMMKGRKLDTI 131

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ + P  I  +LD + + +      E T+EA  P S+        R+  V RI
Sbjct: 132 YIGGGTPTTLLPHQIRKLLDTVGEAFGYEGLAEFTVEAGRPDSITREKLMAIREYPVTRI 191

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +   A HLAR +    ++ DLI  LP + +   E  L+
Sbjct: 192 SVNPQTMNQETLDIIGRRHTVEQTKEAFHLARELGYDNINMDLIVGLPGEDIHMVERTLE 251

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +    A D ++++ L +++                S     ++ +LT       G+  Y 
Sbjct: 252 QVRELAPDSITVHSLAVKRAARLN--IFKEKYQEMSFENNQEIMDLTMKTAYEMGMGPYY 309

Query: 252 -----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV--KVGSHRVAISI 297
                      E   ++ +    ++N+         I +G G  S++    G     +  
Sbjct: 310 LYRQKNMKGNFENVGYAKVDKAGIYNILIMEEKQPIIALGAGGSSKLVFDHGQRIERVEN 369

Query: 298 EKHPESWLKMVRK 310
            K   +++  + +
Sbjct: 370 VKDVSNYISRIDE 382


>gi|238059271|ref|ZP_04603980.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
 gi|237881082|gb|EEP69910.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
          Length = 399

 Score =  210 bits (534), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 127/349 (36%), Gaps = 12/349 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             +  ++L +YVH PFC  +C +C+  +           +++    + + +    G    
Sbjct: 40  RAEPRDALFLYVHVPFCEMRCGFCNLFTRTGAPAEQVTAYLRQLRRQAERVADALGGDPR 99

Query: 72  SS-IFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + + FGGGTP+ +    +  + D            V +++E +P++   +        G
Sbjct: 100 HARVAFGGGTPTYLTAGELTELFDIATSTLGARLPGVPLSVETSPATATPDRLAVLAAHG 159

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
             R+S+GVQS  +   R  GR    +E  AA+  +     P ++ DLIY +  QT   W 
Sbjct: 160 ATRVSIGVQSFLDAEARAAGRPQRRTEVEAALGAIRDAAIPLLNVDLIYGIDGQTADTWR 219

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  AL++  + L LY L +   T   +           +   + LY     +  A G 
Sbjct: 220 RSLDAALAWRPEELYLYPLYVRPLTGLGRR---AHARADWDAQRLALYTQAVEVLGAAGY 276

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS-----RVKVGSHRVAISIEKHPE 302
               +       A +    +Y    D  +G+G GA S                 +    +
Sbjct: 277 RQESMRQFRRADAPTPDGPDYCCQDDGMVGLGCGARSDTTGLHYSFDYAVSVTQVRAVLD 336

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG 351
            +L     +         L   +Q   +L+  L   EG+    +    G
Sbjct: 337 DYLARPADDFRHAEFGFALDGTEQRRRWLLKSLLRAEGVDPAAYAARFG 385


>gi|304412336|ref|ZP_07393944.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|307306120|ref|ZP_07585865.1| Radical SAM domain protein [Shewanella baltica BA175]
 gi|304349371|gb|EFM13781.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|306910993|gb|EFN41420.1| Radical SAM domain protein [Shewanella baltica BA175]
          Length = 445

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 81/374 (21%), Positives = 152/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +  FI S   EM+ ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSYCTFHRFMFKEDKARAYFI-SLRKEMEMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  ++   F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPSIKEVSCESDPQHLDSPGFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILKMTDRLDKFGTGQQTFDKIMGAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L     ++A    N  + I ++      ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAAQQADMA----NQYRQILNSLNGQYNQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F   +      Y   Y +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 289 FGKTDDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIAAGHMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRDTFGVNLDTALFKEMTSMKLIGAIKNDPR 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIVTDNGKMM 417


>gi|308051046|ref|YP_003914612.1| coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
 gi|307633236|gb|ADN77538.1| Coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
          Length = 681

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 84/388 (21%), Positives = 140/388 (36%), Gaps = 29/388 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PR 69
            G        Y+H PFC  +C YC F  + R        ++++   E+            
Sbjct: 52  NGPSDGPRLAYLHIPFCRTRCSYCAFFQN-RSSDDKIAQYLKALHRELAMAADQAALTGA 110

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +I+ GGGTPS + PQ I  +   I     + ++ E+T EA     +   FQ    AG
Sbjct: 111 PFDAIYVGGGTPSDLSPQQILELGQRIRDTLPLRTDAELTFEARFHGFDQGRFQACLDAG 170

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
            NR SLGVQS   +  + LGR  +    + A+  +       +  DLIY LP QT+  W+
Sbjct: 171 FNRFSLGVQSFNTELRQRLGRIDDGDTVLRALERMCNQDQAVIVADLIYGLPGQTLADWQ 230

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHG 247
            +L   +   V    LYQL +   +   +    G +  P        ++    S  + H 
Sbjct: 231 RDLNTLVDTGVGGADLYQLILLPESQLGRAVNKGRVAPPPGTAEKAAMFEAGLSTLARHH 290

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
            +   +S+      E + +N       + I       +          I +E+    +L+
Sbjct: 291 FNRLSVSHFGRDRRERNRYNHLSKAGAELIPF----GAGGGGRIQGHGIMLERQLCRYLE 346

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-------ISVKDWEMLAGRNLDIECE 359
            +      +        EQ        GLR   G       + +      + R+L  +  
Sbjct: 347 RIEAGEKPIAMMTQPHEEQ--------GLRYAAGAGFDLGYLDLDRLYQRSDRDLADDAA 398

Query: 360 ---RNLQRQGFIERVQFSRLRCTQRGMT 384
              +  Q  G +ER     L  T+ G  
Sbjct: 399 PLFQAWQNHGLVER-DGRYLNLTKAGQF 425


>gi|239624475|ref|ZP_04667506.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520861|gb|EEQ60727.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 505

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 129/311 (41%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +YV  PFC   C YC F S+ + ++      ++++   E+++       R + +I
Sbjct: 185 ERGYSLYVGIPFCPTTCLYCSFTSYPISKWTGRTGLYLEALFKELEYTAGKMKGRPLDTI 244

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ +  ++I  IL  +   +     +E T+EA  P S+     +  R  G+ RI
Sbjct: 245 YFGGGTPTSLPAEDIHAILCKLEDLFDTGHALEFTVEAGRPDSITEEKLKVLRNHGITRI 304

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H+         +AR   F  ++ DLI  LP++ M      L 
Sbjct: 305 SINPQTMNQKTLDLIGRRHSVEMVKERFWMARELGFDNINMDLIMGLPEEDMDDVRHTLH 364

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                A D L+++ L I++        +   DL + +    +DL             + Y
Sbjct: 365 EVKELAPDSLTVHSLAIKRAARLNMFREQYGDLKISNTPEMIDLSAACAREMGMEPYYLY 424

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGS--HRVAISIEK 299
                    E   +S  G   ++N+        I   G G  ++V   S   R      K
Sbjct: 425 RQKNMAGNFENVGYSLPGKACIYNILIMEEMQTIAACGAGTTTKVVFPSENRRERCENVK 484

Query: 300 HPESWLKMVRK 310
             E ++  + +
Sbjct: 485 EVEQYISRIDE 495


>gi|160936539|ref|ZP_02083906.1| hypothetical protein CLOBOL_01429 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440330|gb|EDP18075.1| hypothetical protein CLOBOL_01429 [Clostridium bolteae ATCC
           BAA-613]
          Length = 516

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 68/311 (21%), Positives = 142/311 (45%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +YV  PFC   C YC F S+ + ++K     ++++   E+++  +    R + ++
Sbjct: 197 ERGYSLYVGIPFCPTTCLYCSFTSYPIGKWKGRTGLYLEALFKELEYTARKMEGRPLDTV 256

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ +  +++  +L  + + + +S  +E T+EA  P S+ ++  +  R  G+ RI
Sbjct: 257 YFGGGTPTSLSAEDLEALLSRLEQLFDLSRVLEFTVEAGRPDSITMDKLKVLRDHGITRI 316

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR+H         ++AR   F  ++ DLI  LP++ M      L+
Sbjct: 317 SINPQTMNQKTLDLIGRHHTVDMVKDRFYMARELGFDNINMDLIMGLPEENMDDVRRTLE 376

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              + A D L+++ L I++     +F + +    +    E + +      Q     + L+
Sbjct: 377 EVKALAPDSLTVHSLAIKRAARLNMFREEYGGLKIQNTPEMIELSAACARQMGMEPYYLY 436

Query: 250 A-------YEISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGS--HRVAISIEK 299
                   +E   +S  G   ++N+        I   G G  ++V   S   R      K
Sbjct: 437 RQKNMAGNFENVGYSLPGKACIYNILIMEEMQTIAACGAGTTTKVVFPSENRRERCENVK 496

Query: 300 HPESWLKMVRK 310
             E ++  + +
Sbjct: 497 EVEQYISRIDE 507


>gi|325262050|ref|ZP_08128788.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. D5]
 gi|324033504|gb|EGB94781.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           sp. D5]
          Length = 475

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 62/317 (19%), Positives = 131/317 (41%), Gaps = 22/317 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F S    R++   + ++ +   E+  + +    R +++I
Sbjct: 148 KNGYSLYVGIPFCPSICSYCSFGSSPLDRWEDRMDLYMDALCREVSAIGKAAKGRKLNTI 207

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  + K ++    +E T+EA  P S+     +   +  V RI
Sbjct: 208 YIGGGTPTTLNAAQLERLLSLLEKEFSFDDLLEFTVEAGRPDSITAEKLEVLARHPVTRI 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H+  +      LAR   F  ++ DLI  LP +        L 
Sbjct: 268 SVNPQTMQQKTLDAVGRRHSVQDVKDVFRLARTLGFKNINMDLIAGLPGENAADMRDTLS 327

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS--ITSAHGLHA 250
           +      D L+++ L I++   F + ++  DL      +  +     +   +   +    
Sbjct: 328 QIEGLGPDSLTVHSLAIKRAAKFGQENRKIDLHSEIAQMMEESAAAAERMGLLPYYLYRQ 387

Query: 251 ------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR----------V 293
                 +E   ++ +    ++N+         +  G GA +++ +              V
Sbjct: 388 KNIAGNFENVGYAKVDKAGIYNILIMEEKQTILAAGAGASTKIVLPEKITLENGRQTSLV 447

Query: 294 AISIEKHPESWLKMVRK 310
            I   K    ++  + +
Sbjct: 448 RIENVKDIAEYIGRIDE 464


>gi|164687518|ref|ZP_02211546.1| hypothetical protein CLOBAR_01159 [Clostridium bartlettii DSM
           16795]
 gi|164603292|gb|EDQ96757.1| hypothetical protein CLOBAR_01159 [Clostridium bartlettii DSM
           16795]
          Length = 490

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 67/316 (21%), Positives = 149/316 (47%), Gaps = 22/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGP--RSI 71
             N + +YV  PFC  +C YC F ++ V ++   +  +++  L E + + +L     + I
Sbjct: 163 DENKVSLYVGIPFCPTRCYYCSFPANPVDKFGGKKPLYVEKLLQEAKGVAELLRDNNKEI 222

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ + P+ +  ++ G+ K + +S+  E T+EA  P ++     +  +K GV
Sbjct: 223 ETLYIGGGTPTTLSPEEMDTLIKGLFKEFDLSNIKEFTVEAGRPDTINREILEVLKKHGV 282

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ +++L+ +GR H+ ++ I    LAR   F  ++ D+I  L  + +   E 
Sbjct: 283 SRISINPQTMNDETLQKVGRKHSVNDIIECFQLARELGFDNINMDIILGLVDENLAMVEN 342

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + + L+++ L +++ +   +   + +  L   +    + +L+       GL+
Sbjct: 343 TLKEIEKLSPESLTVHTLAVKRTSKLKENIDNYE--LTQFDEMTKMIDLSMKYAKKMGLN 400

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV--A 294
            Y            E   ++  G E ++N+         I +G G+ ++           
Sbjct: 401 PYYMYRQKHMLGNLENIGYAKEGYECIYNIQIMEERQSNIALGAGSITKFVYADENRIER 460

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E ++  V +
Sbjct: 461 VENVKNLEQYIDRVDE 476


>gi|308404907|ref|ZP_07494180.2| HemN C- region superfamily [Mycobacterium tuberculosis SUMu012]
 gi|308365388|gb|EFP54239.1| HemN C- region superfamily [Mycobacterium tuberculosis SUMu012]
          Length = 245

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 11/254 (4%)

Query: 142 EQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  L R H+   A AA   A    F  ++ DLIY  P ++       +  A+   VD
Sbjct: 1   PRVLATLDRVHSPGRAAAAATEAIAEGFTHVNLDLIYGTPGESDDDLVRSVDAAVQAGVD 60

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           H+S Y L +E GT   +  + G+L  P ++V    Y L  +  SA G   YE+SN    G
Sbjct: 61  HVSAYALVVEHGTALARRVRRGELAAPDDDVLAHRYELVDARLSAAGFAWYEVSNWCRPG 120

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
            E  HNL YW  G + G GPGAH  + V          KHP ++ +++      V   E 
Sbjct: 121 GECRHNLGYWDGGQWWGAGPGAHGYIGVTR----WWNVKHPNTYAEILAGATLPVAGFEQ 176

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
           L ++    E +++ +RLR+G+ +           + E    +   G ++     RL  T 
Sbjct: 177 LGADALHTEDVLLKVRLRQGLPLARLGA-----AERERAEAVLADGLLD-YHGDRLVLTG 230

Query: 381 RGMTMLDSVIANLA 394
           RG  + D+V+  L 
Sbjct: 231 RGRLLADAVVRTLL 244


>gi|296125978|ref|YP_003633230.1| oxygen-independent coproporphyrinogen III oxidase [Brachyspira
           murdochii DSM 12563]
 gi|296017794|gb|ADG71031.1| oxygen-independent coproporphyrinogen III oxidase [Brachyspira
           murdochii DSM 12563]
          Length = 376

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 99/344 (28%), Positives = 158/344 (45%), Gaps = 19/344 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           G+Y+H PFC  KC YC+F S V    +   + + +  + E++ +R     + I +I+ GG
Sbjct: 3   GLYIHIPFCTYKCSYCNFYSIVNMNNIDIYKKYTRLLIEELK-IRIKDYKQKIETIYLGG 61

Query: 79  GTPSLIEPQNIALILDGIA-----KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           GTPS++    +  +LD I       N       EITIE+N +++  N           R+
Sbjct: 62  GTPSVLGHDLLKYLLDNIKDIVYTHNENKYLIKEITIESNINNINDNYINFLENIENIRL 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           SLG+Q+  E+SL  + R+    + I A+ L        +S D I  LP  + TQ + ++ 
Sbjct: 122 SLGIQTFNEKSLSIINRHTEKKDIINALKLINKSSLENISIDFICGLPLNSKTQIKDDIL 181

Query: 193 RALSYAVD--HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +        H SLY L + +      + K  + +LPSE  ++  Y L        GL  
Sbjct: 182 FSFDLLPKIKHTSLYYLELTE-----SLKKKWEKLLPSEEESIIYYKLASDTLEGLGLKR 236

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           YEISN+S     S+HN NYW   DYIGIG  A        +    +  K    +   + K
Sbjct: 237 YEISNYSLPDYNSIHNSNYWLMKDYIGIGVSASGCYNNVRY----TNVKMINDYFNSISK 292

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
           N  A  E E+L  + +  EF+ + LR  +GI +  +  +   + 
Sbjct: 293 NKIAEKESEYLDKDTRKKEFIFLSLRTVKGIDINKYNCIFNEDF 336


>gi|220929367|ref|YP_002506276.1| coproporphyrinogen III oxidase [Clostridium cellulolyticum H10]
 gi|219999695|gb|ACL76296.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 504

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 70/318 (22%), Positives = 152/318 (47%), Gaps = 20/318 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
               +NS+ +Y+  PFC  +C YC F +S + +YK   + ++ + L E++    L   + 
Sbjct: 172 ADSRNNSISLYIGIPFCPTRCLYCSFSSSTIAQYKKMVDVYVDTLLKEIKHTALLMESKG 231

Query: 71  I--SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
           +   SI+ GGGTP+ +  + ++ +L+GI +   ++   E T+EA  P ++ ++  +  + 
Sbjct: 232 LVAESIYIGGGTPTSLNERQLSRLLNGIEECIDMTYLREYTLEAGRPDTITIDTLKIIKN 291

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQ 186
           + V+RIS+  Q++  ++L  +GR H   + + A + AR+  F  ++ DLI  LP + +  
Sbjct: 292 SRVSRISINPQTMNAKTLVRIGRLHKPEDVVKAFYAARDMGFDNINMDLICGLPGENVRM 351

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L++      D L+++ + I++ +   +  ++  L     + +  + ++ +      
Sbjct: 352 FDDTLRKIKQLNPDSLTVHTMAIKRASQLTREMENYSLETQYVD-SASMVDMARICAKEM 410

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRV 293
            L  Y            E   +S  G E L+N+         +  G GA ++V    +R+
Sbjct: 411 DLAPYYLYRQKNILGNLENVGYSRKGLECLYNIQIMEERQTILACGAGAVTKVIFPMNRI 470

Query: 294 AIS-IEKHPESWLKMVRK 310
             S   K  E ++  + +
Sbjct: 471 ERSFNVKSVEEYIGRIDE 488


>gi|256004310|ref|ZP_05429292.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum DSM
           2360]
 gi|255991744|gb|EEU01844.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum DSM
           2360]
 gi|316939946|gb|ADU73980.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum DSM
           1313]
          Length = 505

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 149/320 (46%), Gaps = 22/320 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +     + +GVY+  PFC  +C YC F S+ +++Y+   E++I++   E+  +  +   +
Sbjct: 174 LDNSEQDMVGVYIGIPFCTTRCLYCSFTSNPIKKYEHMVESYIKALKKEIMSVAGILDKK 233

Query: 70  S--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
              I SI+ GGGTP+ IE  ++  +L  I +   +    E T+EA  P S+     +  +
Sbjct: 234 KLKIESIYIGGGTPTSIEALHLKELLGFIEQALNLKDLKEYTLEAGRPDSITCEKLEIIK 293

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
            + V+RIS+  QS+ ++ L+ +GR H + + + A  LAR   F  ++ D+I  LP  T+ 
Sbjct: 294 NSRVDRISINPQSMNDEILKKIGRLHTSKDIVEAFQLARSMGFDNINMDVIAGLPGSTLE 353

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   ++  +    + ++++ + I++ +   +     +  L S +    + +    I + 
Sbjct: 354 DFVKTMEEIIVLGPESVTVHTMAIKRASRLNE--DRENYSLTSGSEVSKMVDAAYDILTK 411

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVG--S 290
            GL  Y            E   +S  G ES++N+         I +G GA ++V     +
Sbjct: 412 MGLEPYYLYRQKNMLGNLENIGYSKAGYESIYNVQIMEEKQSIIALGAGAVTKVVFPESN 471

Query: 291 HRVAISIEKHPESWLKMVRK 310
                   K+ E ++  + +
Sbjct: 472 RIERAFNVKNVEEYISRIDE 491


>gi|127511008|ref|YP_001092205.1| coproporphyrinogen III oxidase [Shewanella loihica PV-4]
 gi|126636303|gb|ABO21946.1| Radical SAM domain protein [Shewanella loihica PV-4]
          Length = 447

 Score =  208 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + + +  +  F+ S   EM+ ++ L       S++ GGGT
Sbjct: 65  LYAHVPFCHTLCSFCTFHRFLFKEEKARAYFV-SLRKEMEMVKAL--GYDFESMYIGGGT 121

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K     S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 122 TTVLEDE-LARTIEFAKKL--FPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 177

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 178 NDDILAMTDRLEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 237

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 238 DPRQITTYPLMITHQT---RKSVKGKLAAPQGDMARQYRQILNSLNGQYN----QLSAWA 290

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A +     Y   Y +Y+G+G G+ S +    +    S+ K+ E+    +      V 
Sbjct: 291 FGKANNEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQEN----IASGRMGVE 346

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 347 QQKNYSQKDVMQYRFLLG-MFSGRLSRKYFRDTFGVNLDWALFKEMTSMKAIGAIKNDPN 405

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 406 DPDNLIVTDNGKMM 419


>gi|125973856|ref|YP_001037766.1| coproporphyrinogen III oxidase [Clostridium thermocellum ATCC
           27405]
 gi|281418018|ref|ZP_06249038.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum JW20]
 gi|125714081|gb|ABN52573.1| coproporphyrinogen III oxidase, anaerobic [Clostridium thermocellum
           ATCC 27405]
 gi|281409420|gb|EFB39678.1| Coproporphyrinogen dehydrogenase [Clostridium thermocellum JW20]
          Length = 505

 Score =  208 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 149/320 (46%), Gaps = 22/320 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +     + +GVY+  PFC  +C YC F S+ +++Y+   E++I++   E+  +  +   +
Sbjct: 174 LDNSEQDMVGVYIGIPFCTTRCLYCSFTSNPIKKYEHMVESYIKALKKEIMSVAGILEKK 233

Query: 70  S--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
              I SI+ GGGTP+ IE  ++  +L  I +   +    E ++EA  P S+     +  +
Sbjct: 234 KLKIESIYIGGGTPTSIEALHLKELLGFIEQALNLKDLKEYSLEAGRPDSITCEKLEIIK 293

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
            + V+RIS+  QS+ ++ L+ +GR H + + + A  LAR   F  ++ D+I  LP  T+ 
Sbjct: 294 NSRVDRISINPQSMNDEILKKIGRLHTSKDIVEAFQLARSMGFDNINMDVIAGLPGSTLE 353

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   ++  +    + ++++ + I++ +   +     +  L S +    + +    I + 
Sbjct: 354 DFVKTMEEIIVLGPESVTVHTMAIKRASRLNE--DRENYSLTSGSEVSKMVDAAYDILTK 411

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVG--S 290
            GL  Y            E   +S  G ES++N+         I +G GA ++V     +
Sbjct: 412 MGLEPYYLYRQKNMLGNLENIGYSKAGYESIYNVQIMEEKQSIIALGAGAVTKVVFPESN 471

Query: 291 HRVAISIEKHPESWLKMVRK 310
                   K+ E ++  + +
Sbjct: 472 RIERAFNVKNVEEYISRIDE 491


>gi|167622057|ref|YP_001672351.1| coproporphyrinogen III oxidase [Shewanella halifaxensis HAW-EB4]
 gi|167352079|gb|ABZ74692.1| Coproporphyrinogen dehydrogenase [Shewanella halifaxensis HAW-EB4]
          Length = 442

 Score =  208 bits (531), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 60  LYAHIPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKAL--GYDFESMYIGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K     S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 117 TTVLEDE-LARTIEHAKKL--FPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 172

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 173 NDDILTMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASRL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 233 DPRQITTYPLMITHQT---RKSVKGKLAAPHGDMARQYRQILNSLNGQYN----QLSAWA 285

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A +     Y   Y +Y+G+G G+ S +    +    S      ++ + +      V 
Sbjct: 286 FGKANNEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFS----LRNYQERIATGRMGVD 341

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++    ++      ++G      +S K +    G NLD    + +     I     +  
Sbjct: 342 QQKNYGRKEVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMASMKAIGAIKNDPT 400

Query: 372 QFSRLRCTQRGMTM 385
              +L  T  G  M
Sbjct: 401 DPDKLIVTDNGKMM 414


>gi|222834342|gb|EEE72819.1| predicted protein [Populus trichocarpa]
          Length = 214

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/218 (36%), Positives = 127/218 (58%), Gaps = 4/218 (1%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           + ++ EIT+EANP + E + F+ +R AGV R+S+GVQS +++ L+ +GR H+ ++A AA+
Sbjct: 1   MEADCEITMEANPGTFETDRFRAFRAAGVTRLSIGVQSFDDRLLQAVGRVHDGAQARAAV 60

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             A + F   + DL+YALP QT      +L  A+S+A  HLS+Y LTIE  T F K    
Sbjct: 61  REAADSFETFNIDLMYALPGQTELDLARDLDVAMSFAPPHLSVYHLTIEPNTYFAKFPP- 119

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
               +P +++A D+ +   + T+A G+  YEIS ++  G +  HN NYW++GDY+GIG G
Sbjct: 120 ---AIPEDDLAYDMLDRITARTAAAGMQRYEISAYAREGHQCWHNRNYWQFGDYLGIGAG 176

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
           AHS++      V     + P  ++           + E
Sbjct: 177 AHSKLSFAHRIVRQVRFRDPARYMDQALAGAPLAQDGE 214


>gi|295101013|emb|CBK98558.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Faecalibacterium prausnitzii L2-6]
          Length = 489

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 142/332 (42%), Gaps = 20/332 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E++ +R        
Sbjct: 155 GGAPKTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKLVQPYVDCLCREVEAIRDEADKAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
            + SI+ GGGTP+ +    +  ++  +   + +S+ VE T+EA  P   +       R+ 
Sbjct: 215 MLCSIYIGGGTPTSLSAAQLRQLMGTVRDCFDLSTIVEYTVEAGRPDCTDAEKLAVIREY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  ++ L  +GR H+A + I     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDEVLANIGRRHSAQDIIDCYAEARAAGHDDINMDLIAGLPGDTVEGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L++A++   ++++++ LT+++ +      +  +       +    + L ++    + 
Sbjct: 335 EKSLRQAIALDPENITVHTLTLKRASRIVIEDQKENDYADVAAMLEKCHLLAEAGYRPYY 394

Query: 248 LHA-------YEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISI 297
           L+         E       G E  +N+         +  G G  +++    G     I  
Sbjct: 395 LYRQKNTLQNLENVGWCKPGHEGYYNIYIMEEVQTILSAGAGGSTKLVADGGKRMQRIFN 454

Query: 298 EKHPESWLKMV-----RKNGHAVVEKEFLSSE 324
            K+P  +++       RK G AV     L +E
Sbjct: 455 FKYPTEYIQRFDEVLERKKGVAVFYDHDLGTE 486


>gi|329941292|ref|ZP_08290571.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
 gi|329299823|gb|EGG43722.1| coproporphyrinogen III oxidase [Streptomyces griseoaurantiacus
           M045]
          Length = 460

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 150/370 (40%), Gaps = 21/370 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQ 60
           +          L VYVH PFC  KC +CD+ + +             +  ++ +   E+ 
Sbjct: 44  DRAPGRTPDRDLLVYVHIPFCRSKCHFCDWVTEIPTSELLLTETDQPRRRYVDALCHEIT 103

Query: 61  WMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN--VEITIEANPSS 116
                        + +++GGGT S++    I+ +   + + +       +E TIE +P +
Sbjct: 104 ERGSRLTEAGYRPTILYWGGGTASILSLDEISRVGAALRRAFPALGGELLESTIECSPET 163

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +E      +R+ G  R+S GVQS ++  LR LGR+H+A +A   +  AR   F  +S DL
Sbjct: 164 LEPEKLAAFREIGFRRLSSGVQSFDDARLRTLGRSHDAHQARTIVQQAREAGFEDISIDL 223

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I   P Q   +    ++ AL   + H++LY      GT+  +    G+  L  +      
Sbjct: 224 ICGFPGQPSAETREAVRVALDLPLTHVALYPYRPAHGTVMRRQLGRGNRRLDRQEQKRG- 282

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVA 294
           Y     + +  G   Y +S+    G     +L Y++   D+ G G GA S V  G +   
Sbjct: 283 YAEGAELLTGAGFEEYAMSHFGTGGLRCHSDLAYFQLRCDWAGFGSGATS-VLDGRY--- 338

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
                H    L    ++  A  E   L+S   A   L   L   EG   + WE   G+  
Sbjct: 339 ---LSHGRGRLLEYNRDPLAFDEDYALASAAIAPRMLYQSLTTYEGARREWWERRTGQPF 395

Query: 355 DIECERNLQR 364
           +    +   R
Sbjct: 396 EDVTGQRACR 405


>gi|294507403|ref|YP_003571461.1| Oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
 gi|294343731|emb|CBH24509.1| Oxygen-independent coproporphyrinogen III oxidase [Salinibacter
           ruber M8]
          Length = 373

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/383 (23%), Positives = 157/383 (40%), Gaps = 26/383 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PF     PY D  + V                  +    L     I S++ GGG
Sbjct: 3   GLYVHVPFRAAPRPYDDAYTVVSPTPDASALAAALAREIDRHANSLLEGVPIRSLYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PSL  P+ +A ++  + +    ++  E+T+E +P+          R+ GV R+S+   S
Sbjct: 63  RPSLCRPKTLAPLVRVLGRVVEPTTLDEVTVELHPADASPGYLSHLRRLGVTRLSIEGLS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
             E+ L  +G  H+A +   +I   R    R  S DL++    Q+   W+  L RA+S  
Sbjct: 123 FVEEDLTAVGAPHSADDLARSIRRVRRAGFRQFSVDLVFGGAGQSRAGWKASLHRAVSLG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HL+L++L                          D      +   A G   YE+++ + 
Sbjct: 183 VPHLTLHEL-----------------DTGDAEKRADQLAFALTFLRAKGYVPYELTHFAR 225

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSR----VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            G  SLH  + + +G  +G+GPGA S     +         S      ++++ ++ +   
Sbjct: 226 PGHRSLHQEHVYAHGSILGLGPGAESFWAPDLPPSPAARRWSNVADLTAYVEGLQADAPP 285

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
           V   E LS+   A E++++ LR + G+ +          L     +  R L+R+G I   
Sbjct: 286 VAHDETLSTSALAREYMLLRLRTQAGLDLNALADRYDLRLRDRKADTLRRLRRRGLIHE- 344

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              R+  T RG  + D++   L 
Sbjct: 345 DPDRVALTDRGRLLTDAITRRLL 367


>gi|85710373|ref|ZP_01041438.1| putative coproporphyrinogen oxidase III [Erythrobacter sp. NAP1]
 gi|85689083|gb|EAQ29087.1| putative coproporphyrinogen oxidase III [Erythrobacter sp. NAP1]
          Length = 436

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/403 (20%), Positives = 154/403 (38%), Gaps = 26/403 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA    + G+ S  + +Y+H PFC K C YC  N+     +    +++ +   E++ +  
Sbjct: 31  SALAQAI-GEASGDISLYLHIPFCEKICFYCGCNTGAAGRRQRVASYLAALHAEIETVAT 89

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L     +  + FGGG+P+ IEP     ++D + +N+ +    E +IE +P S++    +
Sbjct: 90  LLPRDARVRRVAFGGGSPNAIEPAEFIDLVDALHRNFWLDKT-EWSIELDPRSMDSVWGE 148

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQ 182
              +AGV R S+GVQ+      + +GR  +      +I   R+     ++FDL+Y LP Q
Sbjct: 149 AIAEAGVTRASMGVQTFAAHCQQAIGRVQDDQMICRSIDWLRSAGVTSLNFDLMYGLPGQ 208

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T     + L        D ++++        +  +        LP  +    + N     
Sbjct: 209 TREDLAVSLSYTALLGADRIAVFGYAHVPH-IVPRQKMIPADDLPGRDERFAMANQAFEY 267

Query: 243 TSAHGLHAYEISNHSFLG---AESLH----NLNYWRYGD-----YIGIGPGAHSRVKVGS 290
            +  G       + +  G   AE+        N+  + D      IG+G  A S    G 
Sbjct: 268 LTRKGYKEVGFDHFALPGDPMAEAARTGTLRRNFQGFTDDQSEVLIGLGSSAIS----GF 323

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             +    EK+   +  M  +           S+E Q    ++  L  +   ++    +L 
Sbjct: 324 PGLIAQNEKNNGRYRMMASQGLLTASVGITRSAEDQLRARVIEELLCKGRAALSPCLLLR 383

Query: 351 GRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                I        +G +       L  T +G+     + +  
Sbjct: 384 HEEEFI----PFLERGLMTLSGLD-LSITPQGLPYARVIASKF 421


>gi|331000087|ref|ZP_08323782.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|329572971|gb|EGG54591.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 463

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 9/300 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGGG 79
           Y++ P+C  +C YC F     R K   + F  + + E+Q    + +     + +++FGGG
Sbjct: 81  YINVPYCETRCLYCLFYIKPYRNKEESKAFADTLIKELQLWSDKPVQKGEPVHAVYFGGG 140

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +E  +I  I+  + +   ++++ EIT E   S    +  +     G NR SLGVQS
Sbjct: 141 TPTALEACDIERIIKAVRRYLPLANDCEITYEGRLSGFGTDKMEAALAGGANRFSLGVQS 200

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  + +GR  +    I  +    +     +  DLIY  P QT+  W+ +L+      
Sbjct: 201 FDTKIRQAVGRRSDKETLIRQLEKLMSYDQAAVVIDLIYGFPFQTLETWKEDLRIGRELN 260

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +D +  YQL + + +  YK  ++G L   P   +   ++          G     IS+ +
Sbjct: 261 LDGIDCYQLRVFEKSPLYKYIQNGKLPPGPDHELRAAMFQEAVQSMHEAGWKRLSISHWA 320

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E + +N       D +  GPGA   +            + P++W K V      + 
Sbjct: 321 SNTRERNFYNYYAKTRTDCLAFGPGAGGNLSG----YGFMQHRQPDAWAKAVESGVKPIA 376


>gi|225017250|ref|ZP_03706442.1| hypothetical protein CLOSTMETH_01176 [Clostridium methylpentosum
           DSM 5476]
 gi|224950025|gb|EEG31234.1| hypothetical protein CLOSTMETH_01176 [Clostridium methylpentosum
           DSM 5476]
          Length = 494

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 24/304 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTG--PRSISSI 74
            +YV  PFC  +C YC F S     K        ++     E+Q   ++       + ++
Sbjct: 165 SLYVSIPFCPTRCAYCSFVSQAVEKKGTAALIGEYVDKLCGELQATAEVVKQCGLQLETV 224

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ +    ++++LD I +++ +S   E T+EA    ++  +  +     GV RI
Sbjct: 225 YFGGGTPTSLSAGQLSILLDCIERSFDLSHLKEYTVEAGRADTITADKLEVLHDHGVGRI 284

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS  ++ L  +GR H A + + A HLAR+  F  ++ DLI  LP  T+  +E  ++
Sbjct: 285 SINPQSFNDRVLEQVGRRHTARQVVDAYHLARSVGFESINMDLIAGLPGDTLESFERTVE 344

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +A+  A ++++++ LTI++ +  ++  + G    P       +    Q +        Y 
Sbjct: 345 QAVVLAPENITVHALTIKRSSALHEQGRAGGGDAP-----AMVAYAGQRLLREGYRPYYL 399

Query: 252 ----------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                     E   ++  G ES +N+         +  G G  +++        I   K+
Sbjct: 400 YRQKNMVDNLENVGYAKPGHESPYNIYIMEENQTILACGAGGSTKLVAPGRIERIFNYKY 459

Query: 301 PESW 304
           P  +
Sbjct: 460 PYEY 463


>gi|291549194|emb|CBL25456.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Ruminococcus torques L2-14]
          Length = 476

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/340 (19%), Positives = 140/340 (41%), Gaps = 39/340 (11%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y   PFC   C YC F+S  +  +K   + ++ + + E++   +L   +++ ++
Sbjct: 148 KNGYSLYAGIPFCPSICSYCSFSSSPIAEWKDQVDRYLDAMIKELKATAKLMQGKTLDTV 207

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  I +N+ +   +E T+EA  P S+     +  RK  V RI
Sbjct: 208 YIGGGTPTTLEADQLDRLLGTIRENFDLEHVLEFTVEAGRPDSITREKLELIRKYPVTRI 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +     HLAR   F  ++ DLI  LP +     +  L+
Sbjct: 268 SVNPQTMQQKTLDLVGRKHTVEDVEQIFHLARELGFDNINMDLIAGLPGEDAADMQDTLE 327

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      D L+++ L I++   F +  +  D         + +     +     GL  Y 
Sbjct: 328 KIEKLHPDSLTVHALAIKRAAKFGQEGRTMDP----GTEIIQMVEAAAASAERMGLVPYY 383

Query: 252 -----------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHR------- 292
                      E   ++      ++N+         I  G G+ +++ +           
Sbjct: 384 LYRQKNIAGNFENVGYAEQDKAGVYNILIMEERQTIIACGAGSTTKLVLPEKIKTSSGKE 443

Query: 293 ---VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
              + +   K+   ++  +          E +  ++   E
Sbjct: 444 TNLIRVENVKNITEYIDRID---------EMIERKEALFE 474


>gi|306820188|ref|ZP_07453832.1| coproporphyrinogen III oxidase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551789|gb|EFM39736.1| coproporphyrinogen III oxidase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 424

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 83/396 (20%), Positives = 159/396 (40%), Gaps = 26/396 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           LS++++   G+    + +Y+H PFC  KC YC+  S           +I++     + MR
Sbjct: 28  LSSFKDRFIGK---EMSLYIHVPFCKSKCGYCNLFSITNVRSDDYGEYIKAVKRHSKQMR 84

Query: 64  QLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVN 120
            L      + +S   GGGTP ++ P++++ + +    ++ +        IE +P  + V 
Sbjct: 85  SLINFEHTNFNSFTLGGGTPMILSPKDLSSLFELARDDFNMDLQKAYSIIEGSPRQISVE 144

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
                +   + R+S+GVQS  +  L  + R   +++   A+ + +      + DLIY +P
Sbjct: 145 KLNLLKDFSLKRLSIGVQSFIDSELLTIQRAEKSADVYKALEIIKTYDFDTNIDLIYGIP 204

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           KQ        +  AL Y    + LY L  +     Y      D           LY + +
Sbjct: 205 KQNEETLIFSIDEALKYNPSEIFLYPLYKQVNARLY------DKFDIDVQKQYKLYQIGR 258

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH-----RVAI 295
               + G     + + S     S  N N   + D + +G G  S  +             
Sbjct: 259 DYLLSKGYEQLSMRSFSKN---SKINAN-CGFEDVLSLGCGGRSYFENLHFCEKYVSEKK 314

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL- 354
           S E   E +LK  + +  + +    L  ++    +++  L    G+S+ D+      +L 
Sbjct: 315 SCESEYEKYLK--KDDFTSDISYYILDDDEMKRRYVIKNLLYISGLSISDYYRHFASDLE 372

Query: 355 -DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            D     NL ++G+ +R     +  T  GM++ D +
Sbjct: 373 SDFSIIANLLKEGYAQRHD-DIISLTPLGMSLSDMI 407


>gi|288941687|ref|YP_003443927.1| coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
 gi|288897059|gb|ADC62895.1| Coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
          Length = 491

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 86/392 (21%), Positives = 161/392 (41%), Gaps = 25/392 (6%)

Query: 21  VYVHWPFCVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSI 74
           +Y+H PFC ++C +C     F     +     E ++ +   EM   R   G +     SI
Sbjct: 76  IYLHLPFCEQRCLFCHYPVKFGKFGDKTHDETERYLDALEREMDLFRNRLGIQKFQARSI 135

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGV 130
             GGGTP+L+ P  +  +L G  +    S   +   + +P ++         +  R+ GV
Sbjct: 136 LVGGGTPTLLTPAQLDRMLTGFKERVDCSRVTQFNFDVDPGTLTDQHGAERRRILREHGV 195

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +R+++GVQSL+++ LR + R H+   A+A+I   R    +++ + I+  P QT+  W   
Sbjct: 196 DRLTIGVQSLDDEILRKMHRPHDVKTALASIEACRADGFQLNIEFIFGYPGQTLEGWMRM 255

Query: 191 LQRALSYAVDHLSLYQLTI----EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +  A    V+ + LY+L I    +      K+ +     LP+   A+ +      I + H
Sbjct: 256 IDEAARLDVEEIQLYRLKIDSYGDAQGPIDKIVQLRPQELPAFEEAIRMKQAAIEILAEH 315

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           G         S   A+  H  +      Y  +G G  A S ++        +     E +
Sbjct: 316 GYTENLRRVFSKDPAKYSHYAHNQCCQLYDQVGFGLTAFSSLRDRFLLNTQTF----EDY 371

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERN 361
            + +      V      ++E+Q    +++ L+ R+ +    +  L G   D    E    
Sbjct: 372 YRRIDSGWLPVNRGIKRNAEEQKRWAVVLPLKNRD-VDKAQYRALTGIEFDEAFPELWER 430

Query: 362 LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           L  +G +E  + +    T++G    D V    
Sbjct: 431 LVAEGLVE-DKGAFAGLTRKGAFFADEVCHQF 461


>gi|303257941|ref|ZP_07343950.1| putative oxygen independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
 gi|302859284|gb|EFL82366.1| putative oxygen independent coproporphyrinogen III oxidase
           [Burkholderiales bacterium 1_1_47]
          Length = 434

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 9/300 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGGG 79
           Y++ P+C  +C YC F     R K     F  + + E+Q    + +     + +++FGGG
Sbjct: 52  YINVPYCETRCLYCLFYIKPYRNKEESNAFADTLIKELQLWSDKPVQKGEPVHAVYFGGG 111

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +E  +I  I+  + +   ++++ EIT E   S    +  +     G NR SLGVQS
Sbjct: 112 TPTALEACDIERIIKAVRRYLPLANDCEITYEGRLSGFGTDKMEAALAGGANRFSLGVQS 171

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  + +GR  +    I  +    +     +  DLIY  P QT+  W+ +L+      
Sbjct: 172 FDTKIRQAVGRRSDKETLIRQLEKLMSYDQAAVVIDLIYGFPFQTLETWKEDLRIGRELN 231

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +D +  YQL + + +  YK  ++G L   P   +   ++          G     IS+ +
Sbjct: 232 LDGIDCYQLRVFEKSPLYKYIQNGKLPPGPDHELRAAMFQEAVQSMHEAGWKRLSISHWA 291

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E + +N       D +  GPGA   +            + P++W K V      + 
Sbjct: 292 SNTRERNFYNYYAKTRTDCLAFGPGAGGNLSG----YGFMQHRQPDAWAKAVESGVKPIA 347


>gi|153810163|ref|ZP_01962831.1| hypothetical protein RUMOBE_00544 [Ruminococcus obeum ATCC 29174]
 gi|149833342|gb|EDM88423.1| hypothetical protein RUMOBE_00544 [Ruminococcus obeum ATCC 29174]
          Length = 516

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 136/315 (43%), Gaps = 22/315 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQL--TGPRSIS 72
            N   +YV  PFC   C YC F+S+  +++K     ++++   E++ +  +     R + 
Sbjct: 191 ENGYSLYVGIPFCPSICLYCSFSSYPLKQWKNRVNQYLEALCKEIKEVAAIMKAKGRKLD 250

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           +++ GGGTP+ +EP+ + ++LD + +N+   +  E TIEA  P S+        R   + 
Sbjct: 251 TVYIGGGTPTTLEPEQLKVLLDALMENFCCENLAEFTIEAGRPDSITREKLMMIRNYPIT 310

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           RIS+  Q++ +++L  +GR H   E   A  LAR   F  ++ DLI  LP +     E  
Sbjct: 311 RISVNPQTMNQETLDIIGRRHTVEETKQAFMLARECGFDNINMDLIVGLPGEDKIMVENT 370

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L    + A D ++++ L +++                +     ++ ++T  +     +  
Sbjct: 371 LNEVKALAPDSITVHSLAVKRAARLN--IFKDKYQEMTFENNQEIMDMTMKVAYEMEMGP 428

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV--KVGSHRVAI 295
           Y            E   ++ +    ++N+         I +G G  S++    G     +
Sbjct: 429 YYLYRQKNMKGNFENVGYAKVDKAGIYNILIMEEKQPIIALGAGGSSKLVFDQGKRIERV 488

Query: 296 SIEKHPESWLKMVRK 310
              K   +++  + +
Sbjct: 489 ENVKDVTNYIDRIDE 503


>gi|154497024|ref|ZP_02035720.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
           29799]
 gi|150273423|gb|EDN00551.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
           29799]
          Length = 493

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 149/339 (43%), Gaps = 27/339 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMR 63
            A    +     + + +YV  PFC  +C YC F S  V +       ++++   E++   
Sbjct: 156 QASLAALDSLKEDEISLYVGIPFCPTRCAYCSFVSADVGKALKLLPPYLEALFREVEAAG 215

Query: 64  QLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVN 120
            L       + +++ GGGTP+ +  + ++ ++  I  +  +S   E T+EA  P ++   
Sbjct: 216 DLLKRLGLYVRTVYIGGGTPTTLSAEQLSALMGHIRTHIDLSRCTEYTVEAGRPDTITAE 275

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
                ++ G +R+S+  QS+ ++ LR +GR+H A++ + A  L RN   P ++ DLI  L
Sbjct: 276 KLAALKENGADRVSVNPQSMSDKVLRAMGRSHTAADILRAYELVRNSGIPCVNMDLIAGL 335

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+ +   +   L + LS    +++++ L ++KG+            LP+     D+ +  
Sbjct: 336 PEDSREGFRSTLDQVLSMDPANITVHTLALKKGSRL----MTEGGSLPTAEDVADMLDYA 391

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV 286
            +     G   Y            E    +  G E+L+N+         + +G G  +++
Sbjct: 392 WTTLRGAGYVPYYLYRQKYMSGSFENVGWTKPGFENLYNICMMEELHTVLALGGGGVTKL 451

Query: 287 --KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
             +       IS  K+P  ++  + +    + +KE L+ 
Sbjct: 452 VNRTAGRIERISDPKYPYEYINTIDR---IIADKEKLAD 487


>gi|167629916|ref|YP_001680415.1| coproporphyrinogen iii oxidase [Heliobacterium modesticaldum Ice1]
 gi|167592656|gb|ABZ84404.1| coproporphyrinogen iii oxidase [Heliobacterium modesticaldum Ice1]
          Length = 517

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 74/319 (23%), Positives = 145/319 (45%), Gaps = 23/319 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT--GP 68
           +      +GVY+  PFC  +C YC F  + V+++K   E F+ S   E++ +        
Sbjct: 188 SPDARRKVGVYIGIPFCPTRCLYCSFPGYDVKKFKGWLEPFLDSLRKEIEAVGSALCQAG 247

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
           + +  I+ GGGTP+ +  + +  +   + ++      VE T+E   P +++ +  Q    
Sbjct: 248 QQVQHIYIGGGTPTALSSEQLERLFCWVNRHLRGPETVEFTLEGGRPDTLDRDKLQRAFV 307

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            GVNR+S+  QS+   +L+ +GR H   + + A+ LAR I FP ++ D+I  LP +    
Sbjct: 308 GGVNRLSINPQSMNAATLKRIGRCHRPDDVVEAVELARAIGFPIINMDMIIGLPGENADS 367

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               L R      ++L+++ + I++ +    M +     LP+ +    +  +T+S     
Sbjct: 368 VRATLDRIAPLCPENLTVHTMAIKRASRL--MAEREQWSLPAADEVEAMLAVTRSGARDL 425

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV---KVGS 290
           GL  Y            E   ++  G E ++N++         GIG GA +++   + G 
Sbjct: 426 GLVPYYLYRQKRILANQENVGYTVPGRECIYNIHVMEERQTIWGIGAGAATKIVCAEDGE 485

Query: 291 HRVAISIEKHPESWLKMVR 309
                   K P ++++ + 
Sbjct: 486 ILDTWHNPKDPMNYVERLD 504


>gi|313906018|ref|ZP_07839371.1| Coproporphyrinogen dehydrogenase [Eubacterium cellulosolvens 6]
 gi|313469131|gb|EFR64480.1| Coproporphyrinogen dehydrogenase [Eubacterium cellulosolvens 6]
          Length = 524

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/315 (20%), Positives = 137/315 (43%), Gaps = 22/315 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
                 +YV  PFC   C YC F SH +  Y+   + + ++   E++++ +      + S
Sbjct: 199 AEKGYSLYVGIPFCPTICLYCSFGSHRMDTYRDMVKPYFEALYKELRFISEEMKDWHLDS 258

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ +  + +  +L  + KN+ + +  E TIEA  P ++  +  +  R+  V R
Sbjct: 259 LYIGGGTPTSVSAEQLRELLQELEKNFDLENLAEFTIEAGRPDTITEDKLRVMREFPVTR 318

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  Q++ +++L  +GR+H   +      LAR+  F  ++ D+I  LP +   + +  L
Sbjct: 319 ISINPQTMNQKTLDLIGRHHTVEQTREIFLLARSLGFDNINMDIIVGLPGEGAAEVQETL 378

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHA 250
            R      D L+++ L +++ T   +++   D   P     +  +     S  +  G+  
Sbjct: 379 DRIKEMDPDSLTVHSLALKRAT---RLNLFKDSYEPISFENSESIMEAAASCAADMGMSP 435

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR--VKVGSHRVAI 295
           Y            E   ++  G   ++N+         +  G GA ++     G      
Sbjct: 436 YYLYRQKNMAGNFENVGYARPGKAGVYNILIMEERQSILAAGSGASTKFVFDGGRRIERA 495

Query: 296 SIEKHPESWLKMVRK 310
              K   ++++ + +
Sbjct: 496 ENVKDLHNYVERIDE 510


>gi|153854670|ref|ZP_01995920.1| hypothetical protein DORLON_01918 [Dorea longicatena DSM 13814]
 gi|149752774|gb|EDM62705.1| hypothetical protein DORLON_01918 [Dorea longicatena DSM 13814]
          Length = 501

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 137/323 (42%), Gaps = 28/323 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F+S    R+K   + ++ +   E++++ + +  + +++I
Sbjct: 168 ENGYSLYVGIPFCPSVCSYCSFSSGPLDRWKEKVDAYVDALCKELEFIAERSKNKKLNTI 227

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +  + +  ++  I + ++    +E T+EA  P S+     +  +   + RI
Sbjct: 228 YIGGGTPTTLTAEQLERLMSWIDEKFSREYLLEYTVEAGRPDSITEEKLKVIKNHDITRI 287

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+++++L  +GR H   E   A  LAR   F  ++ D+I  LP + ++  E  L 
Sbjct: 288 SINPQSMQQKTLDVIGRKHTVEEIKEAYALARKTGFDNINMDIIAGLPGEDISDMEDTLA 347

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      D L+++ L I++         + D     E ++  +    ++         Y 
Sbjct: 348 QIAQMHPDSLTVHSLAIKRAARMEMEDLNRDAKETHEILSGMIERAAKAAKEMDLFPYYL 407

Query: 252 ----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGS---------- 290
                     E   ++ +    ++N+         I  G GA +++ +            
Sbjct: 408 YRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIIAAGAGASTKIVLKDPIPMPGSKKK 467

Query: 291 ---HRVAISIEKHPESWLKMVRK 310
                +     K  ++++  + +
Sbjct: 468 KMTRLIRQENVKAVDAYIDRIDE 490


>gi|307150202|ref|YP_003885586.1| Radical SAM domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306980430|gb|ADN12311.1| Radical SAM domain protein [Cyanothece sp. PCC 7822]
          Length = 481

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 83/391 (21%), Positives = 169/391 (43%), Gaps = 27/391 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGG 78
           VYVH PFC + C +C +   +      +++++Q+   EM    +  G   I   SI  GG
Sbjct: 75  VYVHIPFCRRHCTFCHYPVMLGEQTAEKDHYLQALEKEMDIYMKRLGGDKIRARSILIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRIS 134
           GTP+ +    +   LD   +   +S+  +   + +P ++     +   +  R  GV+R++
Sbjct: 135 GTPTYLSLAQMRRFLDFFVERVDLSTCKQFNYDVDPVTLIGSEGIERLKMMRSYGVDRVT 194

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G+QS  E  L+ +GR+H A EAI +I   +++  +++ + I+    QT+  W   ++ A
Sbjct: 195 IGIQSFNESVLKKMGRHHGAKEAIESIRNCQDLGFQVNIEFIFGYWGQTLENWIEVIEEA 254

Query: 195 LSYAVDHLSLYQLTIEK----GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +S   + + LY+L +E          K+ +     +P+    + +  +   I + HG   
Sbjct: 255 VSLDTEEIQLYRLKVEAYGDYQGAIKKVREIRPQEIPTVEETLMMKQVAIDILNEHGY-- 312

Query: 251 YEISNHSFLGAESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
           YE     F      H  +Y         D IG+G  A S ++           ++ + + 
Sbjct: 313 YENLRRVFSKKP-EHYSHYADNQCCGLLDQIGLGLTAFSSLRDRFVLNT----QNMDEYY 367

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNL 362
            ++      +      SSE+Q    +++ L+ R  +    ++ + G +L+    E  + L
Sbjct: 368 ALIESGKLPLNRGIVRSSEEQMRWAVVLPLKNRR-VWKSYFKQITGADLNEVFGEKIKQL 426

Query: 363 QRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +  G +   +  ++  T+ G    D V    
Sbjct: 427 KTFGLLFENE-EKIELTKLGAFFADEVAQQF 456


>gi|157963937|ref|YP_001503971.1| coproporphyrinogen III oxidase [Shewanella pealeana ATCC 700345]
 gi|157848937|gb|ABV89436.1| Coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
          Length = 442

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 152/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 60  LYAHVPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKAL--GYDFESMYIGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K     S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 117 TTVLEDE-LARTIEHAKKL--FPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 172

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 173 NDDILAMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASKL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A     +  S+   +     ++S  +
Sbjct: 233 DPRQITTYPLMITHQT---RKSVKGKLAAPQGDMARQYRQILNSLNGQYN----QLSAWA 285

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   + +Y+G+G G+ S +    +    S+ K    + + +      V 
Sbjct: 286 FGKANDEGFDEYVIDFDEYLGVGSGSFSFLNDTLYVNTFSLRK----YQERIANGQMGVD 341

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++    ++      ++G      +S K +    G NLD    + +     I     +  
Sbjct: 342 QQKNYGRKEVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKAIGAIKNDPT 400

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 401 DPDNLIVTDNGKMM 414


>gi|238018776|ref|ZP_04599202.1| hypothetical protein VEIDISOL_00634 [Veillonella dispar ATCC 17748]
 gi|237864542|gb|EEP65832.1| hypothetical protein VEIDISOL_00634 [Veillonella dispar ATCC 17748]
          Length = 568

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 12/317 (3%)

Query: 5   SAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + ++  M G          Y+H PFC  KC YC F  +     V ++ +I   ++E++  
Sbjct: 75  AVWDTLMNGTPKKGEMQCAYIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLVSELKLA 133

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +    +   I ++F GGGTP+ + P N   +L  I +   ++++ E+T+E     +   
Sbjct: 134 SERPRLKDGLIHAVFIGGGTPTSLSPANSERLLKAIKEYLPLANDYELTLEGRIHDLIPE 193

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           N   +   GVNR+S+GVQS   +  + +GR       +  +   +      +  DLIY L
Sbjct: 194 NLDVWMANGVNRMSIGVQSFNTEVRQMVGRLDTRETVLERLAALKAYGQCSVVIDLIYGL 253

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNL 238
           P QTM  WE +L   +S  VD   LYQL +  G+   K    G +   +      D++  
Sbjct: 254 PGQTMEVWEQDLADLVSSGVDGADLYQLNVFDGSDLNKDIAKGKVPAAATTAMQGDMFEF 313

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            +             ++ S    E SL+N+           G GA   V        + +
Sbjct: 314 GRKYLDERSYRRLSAAHWSANNRERSLYNILAKAGVPMFPFGSGAGGNVDG----YGMML 369

Query: 298 EKHPESWLKMVRKNGHA 314
            +  + +  MV +    
Sbjct: 370 HRALKPYEDMVSRGEKP 386


>gi|295690399|ref|YP_003594092.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
 gi|295432302|gb|ADG11474.1| oxygen-independent coproporphyrinogen III oxidase [Caulobacter
           segnis ATCC 21756]
          Length = 453

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 124/340 (36%), Gaps = 19/340 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFG 77
           L VYVH PFC + C YC  ++ +         F ++ + E+  +    G    ++ + FG
Sbjct: 51  LSVYVHVPFCRRLCWYCGCHTSIAHSYKRVGTFFETLMREVDLVAARLGKHDGLAHLHFG 110

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+ + P++ A ++  +   +      EI  E +P  +           GVNR+SLGV
Sbjct: 111 GGSPNALSPEDFAALVTRLKTVFRPRPGAEIAAELDPGMLSEAFVDAAGAVGVNRVSLGV 170

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           Q+ +      + R         A    R +  + ++FDL+Y LP QT        + A+ 
Sbjct: 171 QTFDPTVQALVNRIQPYDHVARATERLRAVGVKGLNFDLMYGLPGQTPENVHESARLAVQ 230

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D ++++        +        +  L   +          +     G     + ++
Sbjct: 231 LRPDRVAVFGYAHVP-WMKKHQTMIREADLADLDGRWAQAEAADAALKEAGYVRIGLDHY 289

Query: 257 SFLGA-------ESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           +  G        E     N+  Y D      + IGP +  + + G     +      + W
Sbjct: 290 ALPGDALAHAATEGRLRRNFQGYTDDPAPVLVPIGPSSIGQFREGFVGNLVPT----DQW 345

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
              V +    +     L +E +    ++  L     + V 
Sbjct: 346 SAAVARGELPLSRALVLDAEDRLRAAVIERLMCDMRVDVA 385


>gi|210616268|ref|ZP_03291018.1| hypothetical protein CLONEX_03239 [Clostridium nexile DSM 1787]
 gi|210149866|gb|EEA80875.1| hypothetical protein CLONEX_03239 [Clostridium nexile DSM 1787]
          Length = 488

 Score =  207 bits (526), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 63/328 (19%), Positives = 144/328 (43%), Gaps = 33/328 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S  + ++K   + ++ +   E+ ++ +++  + ++++
Sbjct: 150 KDGYSLYVGIPFCPTTCSYCSFTSQPIHKWKDRVDEYLDALCKEITFVGEVSKEKKLNTV 209

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +EP+ +  +L  I K ++     E T+EA  P S+     +  R+  ++RI
Sbjct: 210 YIGGGTPTTLEPEQLERLLSHIEKTFSFEDLKEFTVEAGRPDSITKEKLEVLRRHQISRI 269

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   +      +AR   F  ++ DLI  LP +T+   +  L+
Sbjct: 270 SINPQTMQQKTLDCIGRKHTVEDIRQVYAMARELGFENINMDLIAGLPGETLDDMKDTLR 329

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV----DLYNLTQSITSAHGL 248
           +   +A D L+++ L +++ +   +  ++G      +  +     ++  L         L
Sbjct: 330 QIEMFAPDSLTVHALAMKRASRLTQEKREGSYRGNDQADSATMLSEMIELAAEYAGKMQL 389

Query: 249 HAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--------- 286
             Y            E   ++ +    ++N+         + +G GA +++         
Sbjct: 390 VPYYLYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIVAVGAGASTKIVLPKEKTLI 449

Query: 287 ----KVGSHRVAISIEKHPESWLKMVRK 310
                     V     K  E ++  + +
Sbjct: 450 DEKTGNPKQIVRTENVKDVEQYINRIDE 477


>gi|225386908|ref|ZP_03756672.1| hypothetical protein CLOSTASPAR_00656 [Clostridium asparagiforme
           DSM 15981]
 gi|225046920|gb|EEG57166.1| hypothetical protein CLOSTASPAR_00656 [Clostridium asparagiforme
           DSM 15981]
          Length = 513

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 133/311 (42%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +YV  PFC   C YC F S+ + ++K     ++ +   E+++  +    R + ++
Sbjct: 193 ERGYSLYVGIPFCPTTCLYCSFTSYPIGKWKGRTGLYLDALFHELEYTARKMEGRPLDTV 252

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ +E   I  IL  + + + +S  +E T+EA  P S+     Q  R  G+ RI
Sbjct: 253 YFGGGTPTSLEAGEIDSILCKLDQLFDLSRALEFTVEAGRPDSITREKLQVLRDHGITRI 312

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ + +L  +GR H         ++AR   F  ++ DLI  LP++ M +    L 
Sbjct: 313 SINPQTMNQSTLDLIGRRHTVEMVKERFYMAREMGFDNINMDLIMGLPQEGMDEVRRTLD 372

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHGLHAY 251
              +   D L+++ L I++        +D + L + +    +DL             + Y
Sbjct: 373 EIRAMKPDSLTVHSLAIKRAARLNMFKEDYEGLTIQNTPEMIDLSAACARELGMEPYYLY 432

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVG--SHRVAISIEK 299
                    E   ++  G   ++N+        I   G G  ++V     + R      K
Sbjct: 433 RQKNMAGNFENVGYALPGKACIYNILIMEEMQTIVACGAGTTTKVVFPAENRRERCENVK 492

Query: 300 HPESWLKMVRK 310
             E ++  + +
Sbjct: 493 EVEQYISRIDE 503


>gi|170729124|ref|YP_001763150.1| coproporphyrinogen III oxidase [Shewanella woodyi ATCC 51908]
 gi|169814471|gb|ACA89055.1| Coproporphyrinogen dehydrogenase [Shewanella woodyi ATCC 51908]
          Length = 445

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 63  LYAHVPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         +  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKTL--FPNIKEVSCESDPQHLDSPEFKQL-EGLVDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILAMTDRLDKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEIIQHDLDMASKL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L     ++A     +  S+   +     ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAASQGDMARQYRQILNSLNGQYN----QLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A +     Y   Y +Y+G+G G+ S +    +    S+ K+ E+    +      V 
Sbjct: 289 FGKANNEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNNFSLRKYHEN----INAGRMGVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKVIGAIKNDPT 403

Query: 372 QFSRLRCTQRGMTM 385
              +L  T  G  M
Sbjct: 404 DPDKLIVTDNGKMM 417


>gi|33151310|ref|NP_872663.1| coproporphyrinogen III oxidase [Haemophilus ducreyi 35000HP]
 gi|33147530|gb|AAP95052.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Haemophilus ducreyi 35000HP]
          Length = 604

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 5/286 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           Y H PFC   C +C F  +  +    +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 56  YFHIPFCASHCIFCGFYRNAWKEDYSKV-YTDKLIEELAYEASIRQGNGKIQAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++++ E T+E   S  ++   +   +AGVNRIS+GVQ+ 
Sbjct: 115 PTALATEDLVRLIKACYQYLPLATDCEFTLEGRISHFDIEKARACVEAGVNRISIGVQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++  A    + 
Sbjct: 175 NSAIRKRLGRKHSGEEAYAYLQALCELDAVIVADLIFGLPNQTDEVWANDINVASGLPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 235 GLDIYAFNNYPFLPINKMIEHGTLPPAASFEVQAQHYAYAVENLQQAGWTQVSNNHFAFP 294

Query: 260 GA--ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           G    + +N         +  G GA       S +V  +++ + ++
Sbjct: 295 GRGERNRYNTLVKSNMPCLAFGSGAGGNFSGYSFQVDTTLQTYLDT 340


>gi|310814966|ref|YP_003962930.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
 gi|308753701|gb|ADO41630.1| coproporphyrinogen III oxidase [Ketogulonicigenium vulgare Y25]
          Length = 449

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 132/356 (37%), Gaps = 21/356 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSI 74
           S  + +YVH P+C + C +C  ++H          ++   L E+  +     P   ++S+
Sbjct: 46  SGHIAIYVHIPYCRRLCWFCADHTHGLMTDRPLRRYLDHILAELALIAGYLPPDVRVASV 105

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGTP+++  + ++ +   +      +    I++E +P++V+        + G+NR +
Sbjct: 106 HLGGGTPTILSAEMLSELGQALRDFRPFTRTARISVEIDPAAVDDARLDALAQIGMNRAA 165

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ  + +     GR    +    A+  L       ++ D++Y LP QT       +++
Sbjct: 166 IGVQGFDPRVQTVTGRVQPFAVTRKAVAGLRARGVGCVTMDVLYGLPYQTPDSMTQTIEK 225

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D L+L+           +     D  LP     + L+   +      G H   I
Sbjct: 226 VMDIRPDRLALFG-HGHAPLRSRRQVMIEDAALPDPQARLALFEAARRQLLDGGYHPVGI 284

Query: 254 SNHSFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKH 300
            +    G +SL           N+  Y +      IGIG  + SR   G  +   +I   
Sbjct: 285 DHFCLPG-DSLAFAAEIGSLRRNFQGYTEENADALIGIGASSISRFAQGYAQNVAAIS-- 341

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
              +   V             +S+      ++  L     + +        R ++ 
Sbjct: 342 --DYGAHVAAGRLPTARGHRFTSDDLLRGAMIEELLCNFSVDIATHARRFDRPIEA 395


>gi|294792263|ref|ZP_06757411.1| HutW protein [Veillonella sp. 6_1_27]
 gi|294457493|gb|EFG25855.1| HutW protein [Veillonella sp. 6_1_27]
          Length = 546

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 10/298 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG 79
           Y+H PFC  KC YC F  +     V ++ +I   ++E++   +    +   I ++F GGG
Sbjct: 72  YIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASERPRLKDGLIHAVFIGGG 130

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P N   +L  I +   ++++ E+T+E     +   N + +   GVNR+S+GVQS
Sbjct: 131 TPTSLSPTNSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIGVQS 190

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  + +GR       +  +   +      +  DLIY LP QTM  WE +L   +S  
Sbjct: 191 FNTEVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADLVSSG 250

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSAHGLHAYEISNHS 257
           VD   LYQL +  G+   K  ++G +   +      D++   +    A        ++ S
Sbjct: 251 VDGADLYQLNVFDGSDLNKDIENGKVPAAATTAMQGDMFEFGRQYLDARSYRRLSAAHWS 310

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               E SL+N            G GA   V        + + +  + +  MV +    
Sbjct: 311 ANNRERSLYNTLAKSGVPMFPFGSGAGGNVDG----YGMMLHRALKPYEDMVSRGEKP 364


>gi|257439399|ref|ZP_05615154.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Faecalibacterium prausnitzii A2-165]
 gi|257198274|gb|EEU96558.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Faecalibacterium prausnitzii A2-165]
          Length = 489

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 66/318 (20%), Positives = 138/318 (43%), Gaps = 25/318 (7%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E++ +R+       
Sbjct: 155 GSAPKTYSLYLGIPFCPSRCSYCSFVSCNLDRDRKLVQPYVDCLCREVEAIREQADKAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
            + SI+ GGGTP+ +    +  ++  + +N+ +S  VE T+EA  P   +       ++ 
Sbjct: 215 KLCSIYIGGGTPTSLSADQLRQLMGTVRENFDLSKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  ++ L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDEVLAGIGRRHSAQDILDCYADARRAGHEDINMDLIAGLPGDTVAGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L++A++   ++++++ LT+++ +   ++  +        +VA  L      + +  G
Sbjct: 335 EHSLRQAIALNPENITVHTLTLKRAS---RIVIEDQKENDYADVAAMLEK--CQLLADAG 389

Query: 248 LHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHR 292
              Y            E       G E  +N+         +  G G  +++    G   
Sbjct: 390 YRPYYLYRQKNTLQNLENVGWCKPGHEGYYNIYIMEEVQTILSAGAGGSTKLVADGGRRM 449

Query: 293 VAISIEKHPESWLKMVRK 310
             I   K+P  +++   +
Sbjct: 450 QRIFNFKYPTEYIQRFAE 467


>gi|313113519|ref|ZP_07799108.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624246|gb|EFQ07612.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 489

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/313 (20%), Positives = 134/313 (42%), Gaps = 15/313 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMR--QLTGPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E++ +R        
Sbjct: 155 GNEPGTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKMVQPYVDCLCREVEEIRIQADKAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
            + SI+ GGGTP+ +    +  ++  +  N+ +S  VE T+EA  P   +       ++ 
Sbjct: 215 KLCSIYIGGGTPTSLSADQLRQLMGTVRANFDLSKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  ++ L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDEVLAGIGRKHSAQDILDCYAEARKAGHDDINMDLIAGLPGDTVESF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L++A++   ++++++ LT+++ +      +  +       +      L ++    + 
Sbjct: 335 ERSLRQAIALDPENITVHTLTLKRASRIVIEDQKENDYADVAAMLEKCRLLAEAGYRPYY 394

Query: 248 LHA-------YEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISI 297
           L+         E       G E  +N+         +  G G  +++    G     I  
Sbjct: 395 LYRQKNTLQNLENVGWCKPGHEGYYNIYIMEEVQTILSAGAGGSTKLVADGGKRMQRIFN 454

Query: 298 EKHPESWLKMVRK 310
            K+P  +++   +
Sbjct: 455 FKYPNEYIQRFAE 467


>gi|303230274|ref|ZP_07317041.1| radical SAM domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515057|gb|EFL57032.1| radical SAM domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 546

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 136/317 (42%), Gaps = 12/317 (3%)

Query: 5   SAYENNMTGQGSNSL--GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           S ++  M G          Y+H PFC  KC YC F  +     + ++N+I   + E++  
Sbjct: 53  SVWDTVMRGAPKRGQMQCAYIHIPFCKTKCTYCGFFQNGTSQSI-EDNYIDGLIGELKLA 111

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +    +   I ++F GGGTP+ + P N   +L  I +   ++++ E+T+E     +   
Sbjct: 112 SESPRLKDGLIHAVFIGGGTPTSLSPANSERLLKAIKEYLPLANDYELTLEGRIHDLIPE 171

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           N + +   GVNR+S+G+QS   +  + +GR       +  +   +      +  DLIY L
Sbjct: 172 NLEVWMNNGVNRMSIGIQSFNTKVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGL 231

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNL 238
           P QTM  WE +L   +S  VD   LYQL +  G+   +    G +    + ++  D++  
Sbjct: 232 PGQTMDVWEQDLADLVSSGVDGADLYQLNVFDGSDLNRDIASGKVPPAATTSMQGDMFEF 291

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            ++   A        ++ S    E SL+N+           G GA   V        + +
Sbjct: 292 GRTYLEARAYRRLSAAHWSANNRERSLYNILAKAGVPMFPFGSGAGGNVDG----YGMML 347

Query: 298 EKHPESWLKMVRKNGHA 314
            +  + +  MV +    
Sbjct: 348 HRALKPYEDMVSRGEKP 364


>gi|83815781|ref|YP_445516.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Salinibacter ruber DSM 13855]
 gi|83757175|gb|ABC45288.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Salinibacter ruber DSM 13855]
          Length = 373

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 89/383 (23%), Positives = 153/383 (39%), Gaps = 26/383 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           G+YVH PF     PY D  + V                  +    L     I S + GGG
Sbjct: 3   GLYVHVPFRAAPRPYDDAYTVVSPTPDASALAAALAREIDRHANSLLEGVPIRSFYVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PSL  P  +  ++  + +    ++  E+T+E +P+          R+ GV R+S+   S
Sbjct: 63  RPSLCRPGALRPLVRALGRVVEPTALDEVTVELHPADASSGYLSHLRRLGVTRLSIEGLS 122

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L  +G  H+A +   +I   R    R  S DL++    Q+   W+  L RA+S  
Sbjct: 123 FVGEDLTAVGAPHSADDLARSIRRVRRAGFRQFSVDLVFGGAGQSRAGWKASLHRAVSLG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           V HL+L++L                          D      +   A G   YE+++ + 
Sbjct: 183 VPHLTLHEL-----------------DTGDAEKRADQLAFALTFLRAKGYVPYELTHFAR 225

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSR----VKVGSHRVAISIEKHPESWLKMVRKNGHA 314
            G  SLH  + + +G  +G+GPGA S     +         S      ++++ ++ +   
Sbjct: 226 PGHRSLHQEHVYAHGSILGLGPGAESFWAPDLPPSPAARRWSNVADLTAYVEGLQADAPP 285

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---IECERNLQRQGFIERV 371
           V   E LS+   A E++++ LR + G+ +          L     +  R L+R+G I   
Sbjct: 286 VAHDETLSTSALAREYMLLRLRTQAGLDLNALADRYDLRLRDRKADTLRRLRRRGLIHE- 344

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
              R+  T RG  + D++   L 
Sbjct: 345 DPDRVALTDRGRLLTDAITRRLL 367


>gi|168334817|ref|ZP_02692942.1| Coproporphyrinogen dehydrogenase [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 456

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 136/312 (43%), Gaps = 14/312 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-LTGP 68
           +    +  L +Y++ PFC  +C YC F S      +   ++++ +  TE+  +   L   
Sbjct: 135 LDKNKATDLSLYINXPFCPSRCSYCSFPSFTLTLKQHKVDDYLTALATEISAITNNLDPK 194

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             I +I+ GGGTP+ +  + +  ++  I KN  +SS  E T+EA  P ++       ++K
Sbjct: 195 YQIKNIYIGGGTPTSLSAKQLQFLMAHIDKNVDMSSVTEYTVEAGRPETITAEKLAIFKK 254

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQ 186
             V+RIS+  Q+  + +L  +GRNHN  +   A+ L R I    ++ D+I  LP +T+  
Sbjct: 255 YHVDRISINPQTFTQNTLDLIGRNHNVKDIYTAVDLVRKIGNFDINMDIILGLPNETINN 314

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               + +    + ++++++ + I+  +   + +   D       +      + +     +
Sbjct: 315 ITHTITKLADLSPENITIHTMAIKSASALRQQNYKADESAIKAMIDFSQQQMIRMGYRPY 374

Query: 247 GLHA-------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIE 298
            ++        +E   ++      ++N+         + +G GA S+      +      
Sbjct: 375 YMYRQKNILGNFENVGYAKPNKTCIYNVQIIEEAQTILALGAGASSKFIAT--QNRFINV 432

Query: 299 KHPESWLKMVRK 310
           K  E ++  + +
Sbjct: 433 KGIEEYIARIDE 444


>gi|289423129|ref|ZP_06424944.1| coproporphyrinogen dehydrogenase [Peptostreptococcus anaerobius
           653-L]
 gi|289156460|gb|EFD05110.1| coproporphyrinogen dehydrogenase [Peptostreptococcus anaerobius
           653-L]
          Length = 523

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 67/314 (21%), Positives = 141/314 (44%), Gaps = 20/314 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLT--GPRSISS 73
           + + +YV  PFC  +C YC F S+        +  ++ + L E + +  +     ++I S
Sbjct: 196 DKISLYVSIPFCPTRCLYCSFPSNALGIQGSKRGQYVDTLLVEAEGLADIITKQGKTIES 255

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
            + GGGTP+ +E  ++  ++ G+   + +S   E T+EA  P ++        +K GV R
Sbjct: 256 FYIGGGTPTALEAHDLDRLITGLFDIFDLSRIEEFTVEAGRPDTITREKLLVLKKHGVGR 315

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  Q++ + +L  +GR H+  + +   ++AR   F  ++ DLI  LP +T       +
Sbjct: 316 ISINPQTMNQVTLDKIGRRHSVEDIVDCFNMARELGFDNINMDLILGLPNETPDMVAHTM 375

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              +    ++++++ L +++ +      +D +  L S    V++  +++   + +G + Y
Sbjct: 376 NTIVGLNPENVTVHTLALKRASDLKINIEDYEDELTSYRQMVEMIKISRDAMAQNGYNPY 435

Query: 252 ------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVK--VGSHRVAIS 296
                       E   ++  G E L+N+           IG GA S+      +    + 
Sbjct: 436 YMYRQKHMLGNLENIGYAKEGKECLYNMQIMEEKQSNYAIGAGAVSKFVYLDENRIERVD 495

Query: 297 IEKHPESWLKMVRK 310
             K  + +L  V +
Sbjct: 496 DVKDLDHYLSRVDE 509


>gi|323344452|ref|ZP_08084677.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           oralis ATCC 33269]
 gi|323094579|gb|EFZ37155.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           oralis ATCC 33269]
          Length = 454

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 79/397 (19%), Positives = 144/397 (36%), Gaps = 31/397 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFG 77
           +  Y+H PFC   C YC  NS+        E ++ +   E+  +     P RSIS I +G
Sbjct: 48  VSFYLHIPFCSDLCHYCGCNSYSMGKDGMLERYVAALHKEIDIIAAHIRPDRSISQIHYG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+ +    I  + D +     V    EI IE +P  +   ++Q   + G  R SLG+
Sbjct: 108 GGSPTALPIHYIHELNDHMLSLLPVIDRPEIAIECHPGYLTAYDWQKLIECGFTRYSLGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q  +E+ L+ + R  +       +HL R+    ++ D ++ LP QT   ++  ++     
Sbjct: 168 QDFDERVLKAVNRRPSLLPIEEILHLLRSSGATVNLDFLFGLPYQTPLSFQHAIEMGAEL 227

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             + L  +        +  +        LP+     ++Y     +    G  +  + +  
Sbjct: 228 QPERLVTFSYGHVP-WVHKRQLILEKYGLPTGQTKQEMYQRAVEVLYGAGYRSIGLDHFV 286

Query: 258 FLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
               E         LH  N+  Y      G     G    S++     +    I     +
Sbjct: 287 LPDDELSIALDTKCLHR-NFQGYCTQRTTGQVYAFGVTGISQLGSAYAQNGRDIP----A 341

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML---------AGRNL 354
           ++  +      V     L+  QQ    ++  +     IS  +             A  N 
Sbjct: 342 YIDEIESGRLNVCRGYILNRRQQIVREVIEAMMCNYYISWSEIARRLSLTPKEVKAAVNY 401

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
           D E  R +   G I+      +  T  G   + +V+A
Sbjct: 402 DEEHLRRMATDGIIDYT-PDAISMTSEGSPFVRNVVA 437


>gi|282850632|ref|ZP_06260011.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282580125|gb|EFB85529.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 546

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 10/298 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG 79
           Y+H PFC  KC YC F  +     V ++ +I   ++E++   +    +   I ++F GGG
Sbjct: 72  YIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASERPRLKDGLIHAVFIGGG 130

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P N   +L  I +   ++++ E+T+E     +   N + +   GVNR+S+GVQS
Sbjct: 131 TPTSLSPTNSERLLKAIKEYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIGVQS 190

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  + +GR       +  +   +      +  DLIY LP QTM  WE +L   +S  
Sbjct: 191 FNTEVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADLVSSG 250

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSAHGLHAYEISNHS 257
           VD   LYQL +  G+   K   +G +   +      D++   +             ++ S
Sbjct: 251 VDGADLYQLNVFDGSDLNKDITNGKVPAAATTAMQGDMFEFGRKYLDERSYRRLSAAHWS 310

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               E SL+N            G GA   V        + + +  + +  MV +    
Sbjct: 311 ANNRERSLYNTLAKSGVPMFPFGSGAGGNVDG----YGMMLHRALKPYEDMVSRGEKP 364


>gi|291286743|ref|YP_003503559.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883903|gb|ADD67603.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 464

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 81/375 (21%), Positives = 150/375 (40%), Gaps = 15/375 (4%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIF 75
              VY++ PFC  +C YC F  ++ +  +  E+F ++ + E++   +L   G  ++++++
Sbjct: 65  PKAVYINIPFCQTRCAYCGFFKNLAKDDM-MESFTETLVKELKLSAELPLFGKGNVNAVY 123

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP  +    I  ILD I +   ++++ E T E        +  +    AGVNR SL
Sbjct: 124 IGGGTPGALHNSQIERILDAINQYIPIANDCEFTFETRTFEFTKDKIETCLNAGVNRFSL 183

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQS    + + +GR  +       I   +      +S DL+Y LP Q+   +  ++  A
Sbjct: 184 GVQSFNSAARKVIGRVDDGDVVARKIEEMKKYNHAAVSIDLMYGLPYQSEKDFMEDILIA 243

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEI 253
               VD ++LYQL +   +   K  K G L  +PS       +     +          +
Sbjct: 244 DELGVDGMALYQLNVFDDSRLDKKVKSGSLPTVPSTKEQAIYHIKAYKMMQNLAYTQASM 303

Query: 254 SNHSFLGA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           S+ +      SL+N            G GA  R     +    S+      ++ MV    
Sbjct: 304 SHWTRGTRDRSLYNRMSKEGCVMHAYGAGAGGRTASCGYFTHPSLTP----YINMVMNGI 359

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIE 369
             ++     +   +    ++        +        AG   R+L      + Q +G + 
Sbjct: 360 KPLMGMTRTTENSRLFNMIVSQTDCGH-LRFDTLNRAAGTDMRSLLEPLVNSWQERGLVT 418

Query: 370 RVQFSRLRCTQRGMT 384
            V+ + ++ T  G  
Sbjct: 419 -VRENLMKLTPEGQF 432


>gi|56419177|ref|YP_146495.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
 gi|56379019|dbj|BAD74927.1| Fe-S oxidoreductase [Geobacillus kaustophilus HTA426]
          Length = 499

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 23/316 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R   I+
Sbjct: 172 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 231

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I    +  +   +      V    EIT+EA  P ++     +  +K  +
Sbjct: 232 TIYYGGGTPTSITADEMDRLYAHMYDVFPDVDRVREITVEAGRPDTITPEKLEVLKKWRI 291

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 292 DRISINPQSYIQETLKAIGRHHTVEETIHKFHLARQMGMNNINMDLIIGLPGEGLAEFTH 351

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K        + S      +    Q  T  HG  
Sbjct: 352 TLAETERLMPESLTIHTLSFKRASEMTK--NKQKYKVASREEVQAMMKAAQEWTKEHGYV 409

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV--A 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 410 PYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRNITR 469

Query: 295 ISIEKHPESWLKMVRK 310
            +  K P+ + +   +
Sbjct: 470 QANPKEPKVYNEHFAE 485


>gi|307566384|ref|ZP_07628823.1| coproporphyrinogen dehydrogenase [Prevotella amnii CRIS 21A-A]
 gi|307344961|gb|EFN90359.1| coproporphyrinogen dehydrogenase [Prevotella amnii CRIS 21A-A]
          Length = 454

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 82/414 (19%), Positives = 162/414 (39%), Gaps = 30/414 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+   E +    G+++L  Y H PFC + C YC  NS+  + +   + ++++   E+  +
Sbjct: 33  YIDVLERSNI-YGTSNLSFYFHIPFCYRLCHYCGCNSYPMQKQENVKAYVEAIHKEIDIV 91

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L   R IS I +GGG+P+ +    +    + +   +    + EI IE +P  +E N+
Sbjct: 92  AKHLNKKRCISQIHYGGGSPTSLPVTVLKEFNEHLFSYFPTIEHPEIAIECHPGYLEKND 151

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           +     A  NR S+GVQ   E  L+ + R  +    +  I++ R     ++ D ++ LP 
Sbjct: 152 WYKLLSAHFNRFSIGVQDFNEDVLKVVNRTPSKLPLLDIIYILREGGASINMDFLFGLPL 211

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   +++A++   D L+ +        +F +        LPS      ++   ++
Sbjct: 212 QTPDSFLQTMRKAITLKPDRLTTFSYG-HCPWIFKRQMILEKAGLPSGEDKSLMFKNAET 270

Query: 242 ITSAHGLHAYEISNHSFLGAE-----SLH--NLNYWRY------GDYIGIGPGAHSRVKV 288
                G     + +      E     + H  + N+  Y      G     G    S++ +
Sbjct: 271 ELLRAGYEEIGLDHFVLPSDELTLALNTHQLHRNFQGYCTRRTTGQVYAFGVTGISQLDM 330

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE- 347
              +   SI    + ++ M+      V +   LSS+Q+    ++  L     I  +    
Sbjct: 331 AYAQNTKSI----DEYIAMLSIGHLPVSKGYNLSSQQKIVRAVIEQLMCNYHIEWETLAS 386

Query: 348 --------MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                   ++   N   +    +QR G I   +   L         + +V A L
Sbjct: 387 ELNISKEFLMDSINYQSDVLEEMQRDGLITFSE-DYLTVLSSARPFVRNVAAAL 439


>gi|303238653|ref|ZP_07325186.1| Coproporphyrinogen dehydrogenase [Acetivibrio cellulolyticus CD2]
 gi|302593772|gb|EFL63487.1| Coproporphyrinogen dehydrogenase [Acetivibrio cellulolyticus CD2]
          Length = 503

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 150/320 (46%), Gaps = 22/320 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +    ++ + +Y+  PFC  +C YC F S+ V++Y+    ++I++   E++ + ++   +
Sbjct: 176 LDSANADMVSIYIGIPFCPTRCLYCSFTSNPVKKYEKMVGSYIKALRKEIKSVGKILADK 235

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
              I SI+ GGGTP+ I+ Q++  +L  I   + +    E T+EA  P S+         
Sbjct: 236 GLKIQSIYIGGGTPTAIDAQHLGELLKEIEDTFCMDDVKEYTLEAGRPDSITEEKLATIA 295

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMT 185
           ++ VNRIS+  Q++++++L  +GR+H + + I A +LAR   F  ++ D+I  LP + + 
Sbjct: 296 RSRVNRISINPQTMKDETLVRIGRSHTSGDIIEAFNLARELGFDNINMDVIAGLPGEDIN 355

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   L      A + ++++ +++++ +         D  L  E+    + +        
Sbjct: 356 DFMYTLDEIKKLAPESITVHTMSVKRASRLNDEKNSYD--LTDEDEVTKMVDSAYEFIKD 413

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG--S 290
            GL  Y            E   +S  GAES++N+         I +G GA +++      
Sbjct: 414 IGLKPYYLYRQKNILGNLENIGYSKPGAESIYNIQIMEERQTIIALGAGATTKLVYPKED 473

Query: 291 HRVAISIEKHPESWLKMVRK 310
               +   K  E ++  + +
Sbjct: 474 RIERVFNVKSVEEYISRIDE 493


>gi|218551137|ref|YP_002384928.1| coproporphyrinogen III oxidase [Escherichia fergusonii ATCC 35469]
 gi|218358678|emb|CAQ91332.1| putative coproporphyrinogen III oxidase and related FeS
           oxidoreductase [Escherichia fergusonii ATCC 35469]
          Length = 416

 Score =  205 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 151/381 (39%), Gaps = 27/381 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  +C +C+  S         +N+I++ + + + M+    P   +S   GGG
Sbjct: 45  HLYIHMPFCQSRCGFCNLFSCTGADNAFIDNYIEAIIVQARQMQ--LAPVDWASFTIGGG 102

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    ++ +   +     V + +   IE +PS           +  VNR+S+G+QS
Sbjct: 103 TPLLLNVGQLSRLFSRVFDELQVDAQIFKAIETSPSDTTAEKVALLCQLAVNRVSIGIQS 162

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R H+A  A  A+ L R   FP ++ D+IY +P QT T     L +AL Y 
Sbjct: 163 FNDLELATLHRRHSAENAHRALELLRRGNFPILNIDIIYGIPGQTATSLMASLNQALDYQ 222

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L LY L                  +P +     LY   +      G     +     
Sbjct: 223 PDELFLYPL----------------YNMPRQPDMYSLYIEARDRLLHEGYTQTSMRRFVR 266

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM---VRKNGHAV 315
           +  ES        + + + +G G  S +    +    S  +     +      R +   +
Sbjct: 267 VNNES--TAESCGFENSLALGAGGRSYLGNLHYCTPWSQNQPASRQIVANFIARPDKTQI 324

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
                LS  +    F++  L   +G+S+ D++      +  D     +  +Q +  + Q 
Sbjct: 325 HHGYVLSQAEMKRRFIIKNLFFYKGLSLSDYQHQFFSEVLSDFPLLGDFIKQDYCHQ-QD 383

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T +G+ + D +     
Sbjct: 384 NRILLTVQGLALSDQLGPQFI 404


>gi|226311475|ref|YP_002771369.1| coproporphyrinogen III oxidase [Brevibacillus brevis NBRC 100599]
 gi|226094423|dbj|BAH42865.1| putative coproporphyrinogen III oxidase [Brevibacillus brevis NBRC
           100599]
          Length = 507

 Score =  205 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 74/317 (23%), Positives = 143/317 (45%), Gaps = 23/317 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRS 70
           Q    L VY+  PFC  KC YC F ++ +R +      F++    EM+ M +      + 
Sbjct: 167 QIDRELSVYIGIPFCPTKCAYCTFPAYAIRSHTASVNPFLEGLHYEMERMGEWLRANDQR 226

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKA 128
           I+SI+FGGGTP+ I   ++  + + + +++    +V E+T+EA  P ++        ++ 
Sbjct: 227 ITSIYFGGGTPTSITADDMNQLFETMHRSFPHMGDVRELTVEAGRPDTITREKLDVMKRW 286

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQW 187
            V+RIS+  QS  +++L+ +GR+H   E I   HLA  +    ++ DLI  LP + +++ 
Sbjct: 287 EVDRISINPQSFTQETLQAIGRHHTVEETIEKYHLAMEMGLTNINMDLIIGLPNEGVSEL 346

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              LQ         L+++ L+ ++ +   +        + S      +  +    T+A+G
Sbjct: 347 AHSLQEVEKLMPASLTVHTLSFKRASEMTQ--NKDRYKVASREEISKMMEMASDWTAANG 404

Query: 248 LHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHR-- 292
              Y            E   ++  G ES++N+         +G+G GA S++        
Sbjct: 405 YDPYYLYRQKNILGNLENVGYAKPGQESIYNIMIMEEVQTILGLGCGAVSKLMAPGSGKL 464

Query: 293 VAISIEKHPESWLKMVR 309
                 K P+++    +
Sbjct: 465 TRFPNPKDPKTYNDTYK 481


>gi|196250672|ref|ZP_03149360.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. G11MC16]
 gi|196209751|gb|EDY04522.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. G11MC16]
          Length = 519

 Score =  205 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 23/312 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           S+ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R   I+
Sbjct: 192 SHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 251

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + K    V    EIT+EA  P ++        +K  +
Sbjct: 252 TIYYGGGTPTSITAEEMDQLYAHMYKVFPDVDRVREITVEAGRPDTITPEKLDVLKKWQI 311

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 312 DRISINPQSYIQETLKAIGRHHTVEETINKFHLARKMGMNNINMDLIIGLPGEGLREFTH 371

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K        +        +    +  TS HG  
Sbjct: 372 TLAETEQLMPESLTVHTLSFKRASEMTK--NKQKYKVADREEIQAMMKAAEEWTSKHGYV 429

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 430 PYYLYRQKNILGNLENVGYALPGHESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRKITR 489

Query: 295 ISIEKHPESWLK 306
            +  K P+ + +
Sbjct: 490 QANPKEPKVYNE 501


>gi|138894227|ref|YP_001124680.1| coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
           NG80-2]
 gi|134265740|gb|ABO65935.1| Coproporphyrinogen oxidase, anaerobic [Geobacillus
           thermodenitrificans NG80-2]
          Length = 501

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 23/312 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           S+ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R   I+
Sbjct: 174 SHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + K    V    EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSITAEEMDQLYAHMYKVFPDVDRVREITVEAGRPDTITPEKLDVLKKWQI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 294 DRISINPQSYIQETLKAIGRHHTVEETINKFHLARKMGMNNINMDLIIGLPGEGLREFTH 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K        +        +    +  TS HG  
Sbjct: 354 TLAETEQLMPESLTVHTLSFKRASEMTK--NKQKYKVADREEIQAMMKAAEEWTSKHGYV 411

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 412 PYYLYRQKNILGNLENVGYALPGHESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRKITR 471

Query: 295 ISIEKHPESWLK 306
            +  K P+ + +
Sbjct: 472 QANPKEPKVYNE 483


>gi|255526674|ref|ZP_05393579.1| Coproporphyrinogen dehydrogenase [Clostridium carboxidivorans P7]
 gi|296187179|ref|ZP_06855576.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255509654|gb|EET85989.1| Coproporphyrinogen dehydrogenase [Clostridium carboxidivorans P7]
 gi|296048214|gb|EFG87651.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 476

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 150/333 (45%), Gaps = 26/333 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+  +  K   E ++QS   E++  
Sbjct: 134 IARSEKSLVNKDKNTISVYVGMPFCPTRCLYCSFTSNPIKGCKNVVEPYLQSLCYEIEKT 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    +   I  ++FGGGTP+ I  +    I++ I  ++   +N+E  T+E   P S+ 
Sbjct: 194 AEYIRTKGLKIQCVYFGGGTPTSINDEQFEKIMEHIYNSFVRENNIEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
            +     +K  V+RIS+  Q++ + +L+ +GR H   + I    +AR   F  ++ D+I 
Sbjct: 254 SSKLNTMKKYNVHRISINPQTMNDDTLKLIGRKHTVQDVIDKFKMAREFGFNHINMDIIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +   +   +  L  + D ++++ +++++ +  +  +  + +  LP +     +Y
Sbjct: 314 GLPGEELKHVKKTCKEILKLSPDSITVHGMSVKRASKLHENIVNNKEFSLPGQGELNLMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAH 283
             T ++     +  Y            E   ++    E L+N+         I  G  A 
Sbjct: 374 EETVNLAKDLNIKPYYMYRQKNMVGNMENVGYAKPSKEGLYNIQIIEEVQTIIACGADAA 433

Query: 284 SRV------KVGSHRVAISIEKHPESWLKMVRK 310
           ++V      ++  H     + ++     +MV K
Sbjct: 434 TKVVFLDENRIERHANVKDVREYINRTEEMVNK 466


>gi|308048714|ref|YP_003912280.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
 gi|307630904|gb|ADN75206.1| coproporphyrinogen III oxidase, anaerobic [Ferrimonas balearica DSM
           9799]
          Length = 449

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 76/393 (19%), Positives = 152/393 (38%), Gaps = 19/393 (4%)

Query: 5   SAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +A +  +   GQ  ++  +YVH PFC  +C YC+F  +     +  + +  +   E++  
Sbjct: 44  TALQQALDGAGQPGDTRCLYVHIPFCRVRCSYCNFFQYASSQSL-IDQYFDALCREIRHK 102

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
                 +     +++ GGGTP+ +    +  +   + +++ ++ + EIT+E   +  +  
Sbjct: 103 AAQPWSQAAPFQAVYIGGGTPTDLSATQLQQLGQMLRQHFPLAPDCEITLEGRVNGFDRA 162

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
            F+     G NR S GVQS   Q  R   R  +    +  I          +  DL+Y L
Sbjct: 163 KFESALAGGFNRFSFGVQSFNSQVRRAARRLDDGDVVMRRIQEIVAYNSAPIVIDLLYGL 222

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNL 238
           P Q++  W+ +L   L      + LYQL   +G   ++  + G L  P++      ++  
Sbjct: 223 PHQSLEVWQQDLADYLESGAHGVDLYQLIDMQGLPMHRQVEQGKLPPPADTATKATMFEQ 282

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
                + H      I++ +    E SL+N       + + +     +        + +  
Sbjct: 283 GVRFMAIHHQRRLSINHWARDNRERSLYNSLAKTTAEILPL----GAGGGGNVAGLQMMQ 338

Query: 298 EKHPESWLKMVRKNGHAVVEKEFL-SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
            +  E +L  +    + V     L +   QA +  +        +S +  E +AG +L  
Sbjct: 339 TRKMEDYLDAIHAERYPVP--MLLRAPAGQALQGHIKAAFDHGVLSRRALERVAGDDLYP 396

Query: 357 ECE---RNLQRQGFIERVQFSRLRCTQRGMTML 386
                 R  Q  G +  ++   L  T  G    
Sbjct: 397 TLLPLFRAWQDNGLVT-LEPDYLVLTLAGQFWS 428


>gi|317128167|ref|YP_004094449.1| coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
           2522]
 gi|315473115|gb|ADU29718.1| Coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
           2522]
          Length = 499

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/328 (21%), Positives = 141/328 (42%), Gaps = 24/328 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
            N + +Y+  PFC   C YC F ++    K G  E F+     EM+        R   ++
Sbjct: 172 KNEVSIYIGIPFCPTMCAYCTFPAYAINGKNGSVEEFLTGLHYEMEVTGTWLKERNIKVT 231

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           +I++GGGTP+ I  + +  + + + + + ++   E+T+EA  P ++     +  +K  V+
Sbjct: 232 TIYYGGGTPTSITAREMDALYEKMYQVFPMADVRELTVEAGRPDTISPEKIEVLKKWNVD 291

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS   ++L+ +GR+H+  E I    L+  +    ++ DLI  LP + + +    
Sbjct: 292 RISVNPQSFTNETLKAIGRHHSVEETIDKYKLSMEMGMTNINMDLIIGLPGEGVEELSHT 351

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           LQ         L+++ L+ ++ +   K        +   +   ++  L +   + H    
Sbjct: 352 LQVTSELKPASLTVHTLSYKRASQMTK--YKEKYKVADRDEIHEMMKLAEDWMNKHSYAP 409

Query: 251 Y------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHR--VAI 295
           Y            E   ++    ES++N+         IG+G GA S+            
Sbjct: 410 YYLYRQKNILGNLENVGYAMDNHESIYNIMIMEELQTIIGLGCGASSKWVDPRTGDIDRY 469

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSS 323
           +  K P++++   +   H   + E LS 
Sbjct: 470 ANPKDPQTYIDRYKDYTH--KKVEMLSQ 495


>gi|119776736|ref|YP_929476.1| coproporphyrinogen III oxidase [Shewanella amazonensis SB2B]
 gi|119769236|gb|ABM01807.1| coproporphyrinogen III oxidase [Shewanella amazonensis SB2B]
          Length = 444

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/371 (21%), Positives = 151/371 (40%), Gaps = 28/371 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+    +    +  FI S   EM   ++L       S++ GGGT
Sbjct: 62  LYAHVPFCHTLCSYCTFHRFTFKEDKARAYFI-SLRKEMTMAKEL--GYDFESMYIGGGT 118

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++         S  E++ E++P  +    F+  +   V+R+S+GVQS 
Sbjct: 119 TTVLEDE-LARTIEHARLL--FPSIKEVSCESDPRHLASPEFRQLKGL-VDRMSIGVQSF 174

Query: 141 EEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+   R        +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 175 DDGILKMTDRFEKFGSGLQTFDRIQAAKELFPIINVDLIFGFRGQTEEVIQRDLDMARRL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++A         I ++      ++S+ +
Sbjct: 235 DPRQITTYPLMITHQT---RKSVKGKLAAPQADLARQYSQ----ILTSLRGQYNQLSSWA 287

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K    + + +     +V 
Sbjct: 288 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLGDTLYVNTFSLRK----YQERIEAGKMSVE 343

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++   ++       ++GL     +S + +    G NLD    + +     I     +  
Sbjct: 344 QQKRYDTKAIMQYRFLLGL-FSGRLSRQYFRDTFGVNLDTALFKEMAAMKLIGALKNDPA 402

Query: 372 QFSRLRCTQRG 382
               L  T  G
Sbjct: 403 NPEELLVTDNG 413


>gi|163749872|ref|ZP_02157117.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161330386|gb|EDQ01365.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 445

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/374 (21%), Positives = 154/374 (41%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  FI S   EM  ++ L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSFCTFHRFLFKEDKARAYFI-SLRKEMDMVKAL--GYDFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K     S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKKL--FPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 176 NDDILTMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEIIQYDLDMAAKL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L     ++A       + I ++      ++S+ +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGKLAASQGDMARQY----RQILNSLNGQYTQLSSWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  A       Y   Y +Y+G+G G+ S +    +    S+ K+ E+    +     +V 
Sbjct: 289 FGKANDEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNNFSLRKYHEN----IAAGRMSVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++  S +       ++G      +S K +    G NLD    + +     I     +  
Sbjct: 345 QQKNYSKKDVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKMIGAIKNDPN 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 404 DPDNLIITDNGKMM 417


>gi|229071822|ref|ZP_04205036.1| Coproporphyrinogen oxidase [Bacillus cereus F65185]
 gi|228711301|gb|EEL63262.1| Coproporphyrinogen oxidase [Bacillus cereus F65185]
          Length = 216

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 8/220 (3%)

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +P QT+   +  L  A +  V H S Y L +E  T+FY +   G L LP E+    +Y +
Sbjct: 1   MPGQTIEDVKETLDIAFTLGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEDHEAKMYEI 60

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
                  HG + YEISN S    +S HNL YW   +Y G G GAHS V     +      
Sbjct: 61  VMDEMEKHGYNQYEISNFSKGDNKSRHNLTYWNNEEYYGFGAGAHSYVNGERIQNVGP-- 118

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
              + +   + + G   ++   ++ +++ +E L +GLR  +G+S   +       +D   
Sbjct: 119 --LKQYFNKIDETGFPYLDVHKVTEKERMEEELFLGLRKTKGVSKTAFRNKFNVEMDQVF 176

Query: 359 ERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            + L   Q QG +E  +   +R T++G  + + V  +  +
Sbjct: 177 AKQLQSNQEQGLLEE-EDGHVRLTRKGKLLGNEVFQSFLI 215


>gi|300022130|ref|YP_003754741.1| radical SAM protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523951|gb|ADJ22420.1| Radical SAM domain protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 465

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 144/380 (37%), Gaps = 16/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGG 79
           Y+H PFC   C +C F  +          +    + E++      G R   I +++ GGG
Sbjct: 62  YIHVPFCANHCLFCGFYRNAYT-PAQAATYTDLLVAEIEREPGAAGIRHHPIDAVYLGGG 120

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   ++A I++ +  N  +S + EIT+E      + +       AGVNRIS+GVQ 
Sbjct: 121 TPSALSASDLARIVEAVRTNLPLSPDCEITLEGRIIHFDDDKIDASLAAGVNRISIGVQC 180

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  R  GR  +  EAI  I  +       +  DL+Y LP QT+  W  +L+ A   A
Sbjct: 181 FDTEVRRRQGRRASKDEAIRFIKGIRDRNRAALVIDLLYGLPGQTLDIWREDLRIAADLA 240

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + LY L +  G+   +    G     +      +Y    SI  A G      S+ + 
Sbjct: 241 PDGVDLYGLNLIPGSPLQRAVASGKQQPTTLQNLGAMYEAGASILGAKGWRQISNSHWAR 300

Query: 259 LGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
              E + +NL   +  + +       S       R +  +    + +   +      +  
Sbjct: 301 TPRERNRYNLRIKQGAECLAY----GSGGGGTIGRYSYHVSSDLQIYSDGILAGRKPIGG 356

Query: 318 KEFLSSEQQADEFLMMGLRL----REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
                    A  ++  G  +      G+ V          L +      QR G +  ++ 
Sbjct: 357 MSLSDDLAIARHYVTAGFEVGHLDLGGLDVPHIAN--ASALFLPLLEQWQRAGLVV-MEG 413

Query: 374 SRLRCTQRGMTMLDSVIANL 393
           S    T  G     ++IA  
Sbjct: 414 SVANLTLAGRFWYSNLIAAF 433


>gi|31544373|ref|NP_852951.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(low)]
 gi|31541217|gb|AAP56519.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930415|gb|ADC30354.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(high)]
          Length = 348

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 35/377 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H P C K C +CDF       +   +  +Q  + E++  R+       SSI+ GGG
Sbjct: 4   HLYIHLPLCQKICTFCDF-KRELIDRHNPKKVVQDLIDEIE--RKQFSDEQFSSIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++ + + +   L  I K    +   E TIE NP  V  +  Q  +K  VNR S+G+Q 
Sbjct: 61  TPNVFDDELLDYFLSKIKKYA--AKKCEFTIECNPDLVTKSQAQILKKNLVNRASVGIQI 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  + L++L R H+ +    A+    +     ++ DL+YALP          ++      
Sbjct: 119 VNNKILKYLNRTHDINHCYEAMQNLYDAGITNINIDLMYALPHMKKEDVLENIKFIKKTK 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L ++ G    K     DL     +       + ++  +      YE++N   
Sbjct: 179 PNHISFYGLDLKPGAYLTKTPYKIDL-----DQEAMQLRVMKAELNKINYKRYEVANWCR 233

Query: 259 L-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           L   +S+HN  YW   DY  IG GAH       +    SI+              +  ++
Sbjct: 234 LKKYQSVHNKAYWLTKDYAAIGWGAHGFENKVEYYYDGSIQ--------------NWQIK 279

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           K  L+ +Q     L+MGLRL++G+ +               E+   +  FI  V+ + LR
Sbjct: 280 KNRLTDDQFYQRVLIMGLRLKDGVDI------TKEPYKTAYEKYQNKLKFIT-VKNNHLR 332

Query: 378 CTQRGMTMLDSVIANLA 394
                + +L++ I ++ 
Sbjct: 333 ADN--IDLLNNSIIDIL 347


>gi|319902571|ref|YP_004162299.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
 gi|319417602|gb|ADV44713.1| coproporphyrinogen III oxidase, anaerobic [Bacteroides helcogenes P
           36-108]
          Length = 455

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/415 (20%), Positives = 152/415 (36%), Gaps = 31/415 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y  A E +    G++ +  Y+H PFC   C YC  NS+        E ++ +   E+  +
Sbjct: 33  YQEAIEKSNQVSGNSHISFYLHIPFCHHLCYYCGCNSYPMMNAGMIEKYVSAMHQEIDLL 92

Query: 63  RQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             L  P R IS I +GGG+P+ I P  I  + + +   +    + EI IE +P  +   +
Sbjct: 93  IPLLNPQRLISQIHYGGGSPTAIPPHFIKELNEHLLSAFRTIESPEIAIECHPGYLSHQD 152

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
           +Q     G NR S+GVQ L ++ L  + R            L RN    ++ D +Y LP+
Sbjct: 153 WQELAACGFNRFSIGVQDLNKRVLETVNRRPPLIPLNEIFFLLRNEGASINLDFLYGLPE 212

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT   +   ++ A+  A D L  +        +  +        LP       +++    
Sbjct: 213 QTAASFLHTIESAIDLAPDRLVTFSYAHVP-WIHKRQLILEKTGLPESEEKSRMFSEAAV 271

Query: 242 ITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY------GDYIGIGPGAHSRVK 287
                G  +  + +      E         LH  N+  Y      G    +G    S++ 
Sbjct: 272 ALHRAGYRSVGLDHFVLPEDELNIALETRQLHR-NFQGYCTRRTTGQVYAVGVTGISQLD 330

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               +      K   +++  +      + +   L+ ++Q    ++  L     I  +   
Sbjct: 331 TAYAQNG----KDIRAYIDAMEHGMWYICKGYSLNRQEQIVREVIENLMCNYYIDWRQLS 386

Query: 348 MLAGRNL---------DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                ++         D    +   + G I+      L  T  G   + +V A+L
Sbjct: 387 EYLSLSIEEVKSATAYDENKLKVFSQDGLID-FSTDYLAVTSTGSPFVRNVAASL 440


>gi|302387918|ref|YP_003823740.1| Coproporphyrinogen dehydrogenase [Clostridium saccharolyticum WM1]
 gi|302198546|gb|ADL06117.1| Coproporphyrinogen dehydrogenase [Clostridium saccharolyticum WM1]
          Length = 484

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/344 (19%), Positives = 142/344 (41%), Gaps = 31/344 (9%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEM 59
           M+ LS+ +            +Y+  PFC   C YC F S  + +++   E ++++   EM
Sbjct: 151 MELLSSID------YHRGYSLYIGIPFCPTTCLYCSFTSFPIGQWEKRMEQYLEALFKEM 204

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
               +    R++ +++ GGGTP+ +   ++ +++  +   +  +   E T+EA  P S+ 
Sbjct: 205 DDTAEKMAGRTLDTVYIGGGTPTSLSSLHLEMLISRLKTTFDFTRVKEFTVEAGRPDSIT 264

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
           +   Q  +  GV RIS+  Q++++++L  +GR H         H+AR+  F  ++ DLI 
Sbjct: 265 LEKLQVLKSHGVTRISINPQTMKQETLDLIGRRHTVDMVKDRFHMARSLGFDNINMDLII 324

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLY 236
            LP++ M      ++   +   D ++++ L I++            DL + +    + L 
Sbjct: 325 GLPEEDMEDVVRTMEEIQALGPDGITVHSLAIKRAARLNMFKDKYGDLKITNTEEMIGLT 384

Query: 237 NLTQSITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV 286
                       + Y         E   +S  G   ++N+        I   G G  ++V
Sbjct: 385 ASYARNMGQEPYYLYRQKNMAGNFENVGYSLPGKACIYNILIMEEKQTIAACGAGTTTKV 444

Query: 287 KVGSHRV--AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD 328
              S      +   K  E ++  +          E L+ +++  
Sbjct: 445 VFPSENRLERVENVKDVEQYIARID---------EMLARKEKML 479


>gi|13774061|gb|AAG23394.1| HugW [Plesiomonas shigelloides]
          Length = 451

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 17/375 (4%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSI 74
               +Y+H PFC  +C +C F  +     +  E +  +   E++    +   +    +++
Sbjct: 62  RPRCLYIHIPFCRVRCTFCSFFQYAASPTLVAE-YFAALSEELKRKAAMPWTQAAPFAAV 120

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTP+ +  + I  +   I  ++ ++ + EIT+E   +      +      GVNR S
Sbjct: 121 YIGGGTPTDLTAEQIFALGQLIKAHFPLTDDCEITLEGRLNRFSDEKYHAAVDGGVNRFS 180

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            GVQS +    R   R     + +  + HL       +  DL++ LP Q+ T W+ +LQ 
Sbjct: 181 FGVQSFDTDVRRKAKRLDPREKLLETVSHLVALDRAPIIVDLMFGLPHQSATAWQQDLQD 240

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYE 252
            L      + LYQL   +GT   ++ ++  L  P +      +Y    +    HG+    
Sbjct: 241 FLHSGAHGVDLYQLIEMQGTPMARLVEENRLQAPAATPEKSRMYAQGVAFMQQHGIQQIS 300

Query: 253 ISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           +++ +    E S +N       D +  G GA   +       A+   +  ES+ + +R+ 
Sbjct: 301 VNHWTRDTRERSRYNHLAKTTADVLPAGAGAGGFIDG----FALMQTRDLESYHQAIREE 356

Query: 312 GHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGF 367
            + V     +S   Q A    +     R  +   + + L+G  L       L   Q +G 
Sbjct: 357 RYPVA--MMMSPNPQHALHCAIKAGFDRGRLQRSELDSLSGMALYDYVSPLLTQWQERGL 414

Query: 368 IERVQFSRLRCTQRG 382
           +  ++  + R T  G
Sbjct: 415 LS-LEADQARLTTAG 428


>gi|297531162|ref|YP_003672437.1| coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
 gi|297254414|gb|ADI27860.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
          Length = 519

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 23/316 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R   I+
Sbjct: 192 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 251

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I    +  +   +      V    EIT+EA  P ++     +  +K  +
Sbjct: 252 TIYYGGGTPTSITADEMDRLYAHMYDVFPDVDRVREITVEAGRPDTITPEKLEVLKKWRI 311

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 312 DRISINPQSYIQETLKAIGRHHTVEETIHKFHLARQMGMNNINMDLIIGLPGEGLAEFTH 371

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K        + S      +    Q  T  HG  
Sbjct: 372 TLAETERLMPESLTIHTLSFKRASEMTK--NKQKYKVASREEVQAMMKAAQEWTKEHGYV 429

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 430 PYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRKITR 489

Query: 295 ISIEKHPESWLKMVRK 310
            +  K P+ + +   +
Sbjct: 490 QANPKEPKVYNEHFAE 505


>gi|284931180|gb|ADC31118.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str. F]
          Length = 348

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 35/377 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H P C K C +CDF       +   +  +Q  + E++  R+       SSI+ GGG
Sbjct: 4   HLYIHLPLCQKICTFCDF-KRELIDRHNPKKVVQDLVDEIE--RKQFSDEQFSSIYLGGG 60

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP++ + + +   L  I K    +   E TIE NP  V  +  Q  +K  VNR S+G+Q 
Sbjct: 61  TPNVFDDELLDYFLSKIKKYA--AKTCEFTIECNPDLVTKSQAQILKKNLVNRASVGIQI 118

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  + L++L R H+ +    A+    +     ++ DL+YALP          ++      
Sbjct: 119 VNNKILKYLNRTHDINHCYEAMQNLYDAGITNINIDLMYALPHMKKEDVLENIKFIKKTK 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S Y L ++ G    K     DL     +       + ++  +      YE++N   
Sbjct: 179 PNHISFYGLDLKPGAYLTKTPYKIDL-----DQEAMQLRVMKAELNKINYKRYEVANWCR 233

Query: 259 L-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           L   +S+HN  YW   DY  IG GAH       +    SI+              +  ++
Sbjct: 234 LKKYQSVHNKAYWLTKDYAAIGWGAHGFENKVEYYYDGSIQ--------------NWQIK 279

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
           K  L+ EQ     L+MGLRL++G+ +               E+   +  F+  V+ + LR
Sbjct: 280 KNRLTDEQFYQRVLIMGLRLKDGVDI------TKEPYKTAYEKYQNKLKFVT-VKNNHLR 332

Query: 378 CTQRGMTMLDSVIANLA 394
                + +L++ I ++ 
Sbjct: 333 ADN--IDLLNNSIIDIL 347


>gi|153816119|ref|ZP_01968787.1| hypothetical protein RUMTOR_02367 [Ruminococcus torques ATCC 27756]
 gi|317502042|ref|ZP_07960224.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090442|ref|ZP_08339323.1| hypothetical protein HMPREF1025_02906 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846604|gb|EDK23522.1| hypothetical protein RUMTOR_02367 [Ruminococcus torques ATCC 27756]
 gi|316896516|gb|EFV18605.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401189|gb|EGG80782.1| hypothetical protein HMPREF1025_02906 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 492

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/317 (22%), Positives = 148/317 (46%), Gaps = 22/317 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F+S  +  +K   E+++ + L E++ + +++      S+
Sbjct: 165 KDGFSLYVGIPFCPSVCSYCSFSSSPIAEWKDKVESYLFALLKEIRAIGKMSEGHRPDSV 224

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E + +  +L  I +N+ +S+ +E T+EA  P S+        RK  V RI
Sbjct: 225 YIGGGTPTTLEAEQMDRLLKTITENFDLSNVLEFTVEAGRPDSITEEKLAVIRKYPVTRI 284

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GRNH  ++   A +LAR   F  ++ DLI  LP +  +  E  L+
Sbjct: 285 SINPQTMQQKTLDLVGRNHTVAQTKDAFYLARKLGFDNINMDLIAGLPGEDASDMEDTLR 344

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-TSAHGLHA- 250
           +      D L+++ L I++   + +  +  DL      + +   +  + I    + L+  
Sbjct: 345 QVEEMHPDSLTVHALAIKRAARYGQEGRKQDLHSEISQMIMSAADCAKRIGLQPYYLYRQ 404

Query: 251 ------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGS----------HRV 293
                 +E   ++ L    ++N+         +  G GA +++ +            + V
Sbjct: 405 KNIAGNFENVGYAELDKAGIYNILIMEEKQTILAAGAGASTKILLKDPIRTDSGKEINLV 464

Query: 294 AISIEKHPESWLKMVRK 310
                K+   ++  V +
Sbjct: 465 RCENVKNIMEYIDRVDE 481


>gi|294794125|ref|ZP_06759262.1| HutW protein [Veillonella sp. 3_1_44]
 gi|294455695|gb|EFG24067.1| HutW protein [Veillonella sp. 3_1_44]
          Length = 546

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 10/298 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG 79
           Y+H PFC  KC YC F  +     V ++ +I   ++E++   + +  +   I ++F GGG
Sbjct: 72  YIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASERSRLKDGLIHAVFIGGG 130

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P N   +L  I     ++++ E+T+E     +   N + +   GVNR+S+GVQS
Sbjct: 131 TPTSLSPTNSERLLKAIKAYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIGVQS 190

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  + +GR       +  +   +      +  DLIY LP QTM  WE +L   +S  
Sbjct: 191 FNTEVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADLVSSG 250

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSAHGLHAYEISNHS 257
           VD   LYQL +  G+   K   +G +   +      D++   +             ++ S
Sbjct: 251 VDGADLYQLNVFDGSDLNKDITNGKVPAAATTAMQGDMFEFGRKYLDERSYRRLSAAHWS 310

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               E SL+N            G GA   V        + + +  + +  MV +    
Sbjct: 311 ANNRERSLYNTLAKSGVPMFPFGSGAGGNVDG----YGMMLHRALKPYEDMVTRGEKP 364


>gi|269798395|ref|YP_003312295.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269095024|gb|ACZ25015.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 546

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 10/298 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG 79
           Y+H PFC  KC YC F  +     V ++ +I   ++E++   + +  +   I ++F GGG
Sbjct: 72  YIHIPFCKTKCTYCGFFQNGTSQSV-EDQYIDGLISELKLASERSRLKDGLIHAVFIGGG 130

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P N   +L  I     ++++ E+T+E     +   N + +   GVNR+S+GVQS
Sbjct: 131 TPTSLSPTNSERLLKAIKAYLPLANDYELTLEGRIHDLIPENLEVWMANGVNRMSIGVQS 190

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  + +GR       +  +   +      +  DLIY LP QTM  WE +L   +S  
Sbjct: 191 FNTEVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWEQDLADLVSSG 250

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNLTQSITSAHGLHAYEISNHS 257
           VD   LYQL +  G+   K   +G +   +      D++   +             ++ S
Sbjct: 251 VDGADLYQLNVFDGSDLNKDITNGKVPAAATTAMQGDMFEFGRKYLDERSYRRLSAAHWS 310

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               E SL+N            G GA   V        + + +  + +  MV +    
Sbjct: 311 ANNRERSLYNTLAKSGVPMFPFGSGAGGNVDG----YGMMLHRALKPYEDMVTRGEKP 364


>gi|89895194|ref|YP_518681.1| coproporphyrinogen III oxidase [Desulfitobacterium hafniense Y51]
 gi|219669624|ref|YP_002460059.1| coproporphyrinogen III oxidase [Desulfitobacterium hafniense DCB-2]
 gi|89334642|dbj|BAE84237.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539884|gb|ACL21623.1| Coproporphyrinogen dehydrogenase [Desulfitobacterium hafniense
           DCB-2]
          Length = 518

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/330 (21%), Positives = 148/330 (44%), Gaps = 16/330 (4%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMR 63
             +  +M     + + VY+  PFC  +C YC F ++ +++ +   E+++Q    E++   
Sbjct: 178 QPFLEDMKSHPQD-VAVYIGIPFCPTRCSYCSFPAYSLKQGREPLEHYLQGLGEEIRTAG 236

Query: 64  QL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVN 120
                G  +  S++ GGGTP+++  + +  ++  +  +       E T+EA  P ++   
Sbjct: 237 AWMKAGGLTADSLYLGGGTPTILTIREMEGLIALMMTHIPHREAGEFTVEAGRPDTLSEG 296

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                R +GVNR+S+  Q++  ++L+ +GR H   + I A  LAR I    ++ DLI  L
Sbjct: 297 KLLALRASGVNRLSVNPQTMHNRTLQRIGRAHTVEDIIKAYELAREIPGWVINMDLIMGL 356

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK----MHKDGDLVLPSENVAVDL 235
           P +     +  L+R  +   D+L+++ L I++G+  ++     +   +L    E++   +
Sbjct: 357 PGEGAKDIQETLERIRALEPDNLTVHALAIKRGSKEHEQGSTQNLGRELEGMQEDIMAAV 416

Query: 236 YNLTQSITSAHGLHAY----EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAHSRVKVGS 290
            ++       +         E    +  G    +N+         IG+G GA S++    
Sbjct: 417 RSMGMEPYYLYRQKHIAGNLENIGFAKPGLACRYNIGIMEERQTVIGLGAGASSKIVDPR 476

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
               +S   HP +W   +++      ++E 
Sbjct: 477 DFSLVSFH-HPANWQVYLKRWRETQRKREE 505


>gi|312837890|gb|ADR01089.1| NocN [Nocardia sp. ATCC 202099]
          Length = 420

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 96/389 (24%), Positives = 163/389 (41%), Gaps = 40/389 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWM-RQLTGPRS 70
           L +YVH PFC  KC +CD+   +       +     ++N+I++ +TE++    QL     
Sbjct: 31  LMLYVHVPFCHSKCTFCDWVQAIPTKDLLRKPEDSVRKNYIRALVTEIETRGAQLRAAGQ 90

Query: 71  ISSI-FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  + ++GGGT S ++      I   +   + +S+  E TIE +P +V+    + +R  G
Sbjct: 91  VPYVVYWGGGTASSLDNAEAEAIWGALDSAFDLSTVAEATIECSPDTVDKAKLEFFRGLG 150

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQS ++  LR LGR H A EA   +H AR   F  +S D++   P Q + +  
Sbjct: 151 FNRVSSGVQSFDDARLRRLGRRHTAGEADRIVHHAREAGFDEVSIDIMSGFPDQELDELR 210

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++A+S  + HLSLY      GT   +     +            +   + +    GL
Sbjct: 211 ATVEKAVSLPLTHLSLYSFRPTPGTFMRRKLAGTEKRAYLRKQQAL-FTEARRMIIDAGL 269

Query: 249 HAY------EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             Y       +S  + +         +    D  G G GA S V             H +
Sbjct: 270 PEYASGYFGRVSPFAAM--------YFQLRADTAGFGSGAISLVD-------RQFLSHAK 314

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN- 361
             L    ++  A         ++    FL  GL + +G+  ++W +  G +LD    R  
Sbjct: 315 GKLHAYIQDPLAYDIDVPAGQDRVLVSFLQAGLAMFDGVLREEWRVSTGTDLDEVLTRPS 374

Query: 362 -------LQRQGFIERVQFSRLRCTQRGM 383
                  L+ +G IE  +  RL     G+
Sbjct: 375 IAPLADFLRGRGLIEDERGIRLDPRLAGL 403


>gi|126656745|ref|ZP_01727959.1| hypothetical protein CY0110_23941 [Cyanothece sp. CCY0110]
 gi|126621965|gb|EAZ92673.1| hypothetical protein CY0110_23941 [Cyanothece sp. CCY0110]
          Length = 487

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/393 (21%), Positives = 162/393 (41%), Gaps = 26/393 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFF 76
           L +YVH PFC KKC +C +   +      ++ ++ +   EM    +  G   I   SI  
Sbjct: 77  LDIYVHIPFCEKKCVFCHYPVKLGEQSSEKDRYLDALEKEMDLYLRRLGLEQIKARSILV 136

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNR 132
           GGGTP+ +    +   LD       VS+  +   + +P ++         +  R  GV+R
Sbjct: 137 GGGTPTFLTLDQLRRFLDSFVTRVDVSTCTQFNYDVDPVTLIGPEGEERLRIMRDYGVDR 196

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +++G+QSL    L+ + R+H   EA+ +I  A+    ++  + I+  P +T+  W   ++
Sbjct: 197 LTIGIQSLNADILKMMNRHHGVEEALLSIENAKKFGYQVDIEFIFGYPGETLDNWIDVVE 256

Query: 193 RALSYAVDHLSLYQLTIEK-GTLFYKMHKDGDLVL---PSENVAVDLYNLTQSITSAHGL 248
           +A+S  V+ + LY+L +E  G    K+    +  L   PS   ++ +  +   I +A+G 
Sbjct: 257 QAVSLGVEEIQLYRLKVEAYGDYQAKIKAVKERGLQAFPSVEESIMMKQIAIDILNANGY 316

Query: 249 HAYEISNHSFLGAESLHNLNYWRYG--DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           H      ++       H  +    G  D +G G  A S ++        S     E + +
Sbjct: 317 HENLRRVYTKERKYYSHYADNQCCGLLDQVGFGLTAFSSLRDRFVLNTQSF----EDYYQ 372

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGL--RLREGISVKDWEMLA-GRNLDIEC---ER 360
            + +    +      S E+Q    +++ L  R       K +  +  G +LD        
Sbjct: 373 KISEGKLPLNRGIVRSHEEQMRWAIILPLKNRCVW---KKYYSEVTGGVSLDEVFRPKIE 429

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            L+  G +      ++  T+ G    D V    
Sbjct: 430 ALKSFGLLVE-DDEKIELTKLGAFFADEVAQQF 461


>gi|330801736|ref|XP_003288880.1| hypothetical protein DICPUDRAFT_153168 [Dictyostelium purpureum]
 gi|325081073|gb|EGC34603.1| hypothetical protein DICPUDRAFT_153168 [Dictyostelium purpureum]
          Length = 1383

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 117/385 (30%), Positives = 185/385 (48%), Gaps = 68/385 (17%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEIT 109
           +++F  +    ++    R I+SI+FGGGTPSL +       ++ + K +      ++EIT
Sbjct: 9   LEAFSRKYYHTQEHQQNRPINSIYFGGGTPSLAKISTFVETMETMRKMFPSLTIEDIEIT 68

Query: 110 IEANPSSVE-VNNFQGYRKA-GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +E NP   +  +  + +++  GVNR+SLG+QS  ++ L++LGR H   +A  ++ +A+ +
Sbjct: 69  LEVNPDQKDLKSMLKDFKQFVGVNRVSLGIQSFIDEDLKYLGRTHTGKQAAESLKIAQEL 128

Query: 168 FPRMSFDLIYALP-KQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKD--- 221
           F  ++FDLIYA   KQT   W  EL+ AL       H+SLY LT E+GT F+K       
Sbjct: 129 FDNVTFDLIYARHQKQTRESWRNELKDALYLTHGQGHISLYCLTFEEGTSFHKRLNMKRS 188

Query: 222 --GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGI 278
               +       A DLY +T   T+ HG + YE+SN +   ++ S HNLNYWR GDYIGI
Sbjct: 189 SRHKINELDHETAGDLYEITLEETNKHGFNQYEVSNFTSSESQKSKHNLNYWRGGDYIGI 248

Query: 279 GPGAHSRVKVGS-------------------------------HRVAISIEKHPESWLKM 307
           GPG+ SR+ + +                               +R +     HP+ W+K 
Sbjct: 249 GPGSSSRISIINENNNNNNNNNNNNNNNNNNNNNNNNNNSSLINRYSTKNILHPKDWMKE 308

Query: 308 VRKN-------------------GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
           +  +                    +A +E + LS+   A+E L+MGLR  EG+    + +
Sbjct: 309 LLDSSTTNNDGIINNPKPKESILKNAFLENQLLSNTDVANELLLMGLRTEEGVQNSTFSL 368

Query: 349 LA-GRNLDIEC----ERNLQRQGFI 368
           L  G  LD          L  Q  +
Sbjct: 369 LTNGLTLDQYLNMKQVNLLIEQELL 393


>gi|291518575|emb|CBK73796.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Butyrivibrio fibrisolvens 16/4]
          Length = 479

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/332 (21%), Positives = 140/332 (42%), Gaps = 24/332 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   VY+  PFC   C YC F S+ +  +    +++I +   EM +  +    +S+++I
Sbjct: 153 DNGYSVYIGIPFCPSTCLYCSFTSYPIGLWTKKLDDYIDALEKEMAFTAEACKGKSLTTI 212

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++ +++  +L  + + +  S  +E TIEA  P S+ +   Q  +   V RI
Sbjct: 213 YIGGGTPTSLDAEHLERLLTLVDRYFNTSDLLEYTIEAGRPDSITLEKLQVMKNHPVTRI 272

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++ +++L  +GR H   +       AR   F  ++ DLI  LP +T+      L 
Sbjct: 273 SINPQTMNQKTLDLIGRFHKVEDIHRVFGWARELGFKNINMDLILGLPGETIEDVAYTLS 332

Query: 193 RALSYAVDHLSLYQLTIEKGTLF-YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                A D+L+++ L ++      Y      D ++ +    +D+             + Y
Sbjct: 333 EVEKLAPDNLTVHSLALKHSARLNYDKEAYEDYLIDNSQKHMDICLEAAKRMGMAPYYLY 392

Query: 252 ---------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRV--KVGSHRVAISIEK 299
                    E   +S  G E L+N+        I  +G G   +     G         K
Sbjct: 393 RQKNMAANLENIGYSTPGNEGLYNILIMEEKQTIMALGCGTACKFVTDHGKTVTRCENVK 452

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
             + ++  + +    ++E+      ++  E L
Sbjct: 453 DVQLYMDRIDE----MIER----KRERLREDL 476


>gi|331086132|ref|ZP_08335214.1| hypothetical protein HMPREF0987_01517 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406291|gb|EGG85805.1| hypothetical protein HMPREF0987_01517 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 492

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/331 (18%), Positives = 145/331 (43%), Gaps = 36/331 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S+ +  +K   E ++ +   E+ ++  ++  + +++I
Sbjct: 151 EDGYSLYVGIPFCPTTCAYCSFTSYPIEAWKTRVEEYLDALCKEISYVGDISKEKKLNTI 210

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  + + ++     EIT+EA  P S+     +  ++  + RI
Sbjct: 211 YIGGGTPTTLEADQLDRLLTHLEETFSYEEIKEITVEAGRPDSITREKLEVLKRHKIPRI 270

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   + +    +AR + F  ++ DLI  LP +T+   +  L+
Sbjct: 271 SINPQTMQQKTLDLIGRKHTVGDILRVYGMARELEFENINMDLIAGLPGETVEDVKDTLR 330

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE--NVAVDLYNLTQSITSAHGLHA 250
           +    + D ++++ L +++ +   +M +  +  L  E       + +L     +  G+  
Sbjct: 331 QIEELSPDSITVHSLAVKRASRLAQMPELKEAALQEERGRQMEAMIDLAAESAARMGMKP 390

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR------------ 285
           Y            E   ++ +    ++N+         + +G GA ++            
Sbjct: 391 YYLYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIVAVGAGASTKAVFSAAEDQLKN 450

Query: 286 ------VKVGSHRVAISIEKHPESWLKMVRK 310
                 VK+      +   K    ++  + +
Sbjct: 451 GQPGKEVKLEKRIERVENVKDVGQYIARIDE 481


>gi|313892909|ref|ZP_07826486.1| radical SAM domain protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442262|gb|EFR60677.1| radical SAM domain protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 546

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 12/317 (3%)

Query: 5   SAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + ++  M G          Y+H PFC  KC YC F  +     V ++ +I   ++E++  
Sbjct: 53  AVWDTLMNGTPKKGEMQCAYIHIPFCKTKCTYCGFFQNGTSQNV-EDQYIDGLVSELKLA 111

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +    +   I ++F GGGTP+ + P N   +L  I +   ++++ E+T+E     +   
Sbjct: 112 SERPRLKDGLIHAVFIGGGTPTSLSPSNSERLLKAIKEYLPLANDYELTLEGRIHDLIPE 171

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYAL 179
           N   +   GVNR+S+GVQS   +  + +GR       +  +   +      +  DLIY L
Sbjct: 172 NLDVWMANGVNRMSIGVQSFNTEVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGL 231

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-DLYNL 238
           P QTM  WE +L   +S  VD   LYQL +  G+   K    G +   +      D++  
Sbjct: 232 PGQTMEVWEQDLADLVSSGVDGADLYQLNVFDGSDLNKDIAKGKVPAAATTAMQGDMFKF 291

Query: 239 TQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            +             ++ S    E SL+N+           G GA   V        + +
Sbjct: 292 GRKYLDERSYRRLSAAHWSANNRERSLYNILAKAGVPMFPFGSGAGGNVDG----YGMML 347

Query: 298 EKHPESWLKMVRKNGHA 314
            +  + +  MV +    
Sbjct: 348 HRALKPYEDMVSRGEKP 364


>gi|325662329|ref|ZP_08150938.1| hypothetical protein HMPREF0490_01677 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471331|gb|EGC74554.1| hypothetical protein HMPREF0490_01677 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 492

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/331 (18%), Positives = 145/331 (43%), Gaps = 36/331 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F S+ +  +K   E ++ +   E+ ++  ++  + +++I
Sbjct: 151 EDGYSLYVGIPFCPTTCAYCSFTSYPIEAWKTRVEEYLDALCKEISYVGDISKEKKLNTI 210

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +E   +  +L  + + ++     EIT+EA  P S+     +  ++  + RI
Sbjct: 211 YIGGGTPTTLEADQLDRLLTHLEETFSYEEIKEITVEAGRPDSITREKLEVLKRHKIPRI 270

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   + +    +AR + F  ++ DLI  LP +T+   +  L+
Sbjct: 271 SINPQTMQQKTLDLIGRKHTVEDILRVYGMARELEFENINMDLIAGLPGETVKDVKDTLR 330

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE--NVAVDLYNLTQSITSAHGLHA 250
           +    + D ++++ L +++ +   +M +  +  L  E       + +L     +  G+  
Sbjct: 331 QIEELSPDSITVHSLAVKRASRLAQMPELKEAALQEERGRQMEAMIDLAAESAARMGMKP 390

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSR------------ 285
           Y            E   ++ +    ++N+         + +G GA ++            
Sbjct: 391 YYLYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIVAVGAGASTKAVFSAAEDQLKN 450

Query: 286 ------VKVGSHRVAISIEKHPESWLKMVRK 310
                 VK+      +   K    ++  + +
Sbjct: 451 GQPGKEVKLEKRIERVENVKDVGQYIARIDE 481


>gi|150390121|ref|YP_001320170.1| coproporphyrinogen III oxidase [Alkaliphilus metalliredigens QYMF]
 gi|149949983|gb|ABR48511.1| Coproporphyrinogen dehydrogenase [Alkaliphilus metalliredigens
           QYMF]
          Length = 502

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/312 (21%), Positives = 140/312 (44%), Gaps = 22/312 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIF 75
           + +Y+  PFC  +C YC F S+ V ++    + +++    E+  + +L     + I +++
Sbjct: 180 VSLYISVPFCPTRCLYCSFPSNSVTQWGHLMDEYVEQLCVEITEIGKLLKQKNKKIETLY 239

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +   +   I   +  ++      EIT+EA  P ++++      +  G  R+S
Sbjct: 240 IGGGTPTTLHISHFDKIFQSVYASFDKDRIKEITVEAGRPDTIDLEKLAFLKSQGTTRVS 299

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++ + +L+ +GR H+  + + A  +AR+  F  ++ DLI  LP +        ++ 
Sbjct: 300 INPQTMNDCTLQTIGRKHSVQDFLEACKMARDAGFENINMDLIIGLPGEDSEMVAYTMKE 359

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
               A  +L+++ L I+KG+   K  +  +L     +    +  +T++     GLH Y  
Sbjct: 360 IQKLAPTNLTVHTLAIKKGSNLIKDQEHYELS--QHDEIQKMLQITRNYAEKLGLHPYYM 417

Query: 252 ----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV--AISIE 298
                     E   +S +G E ++N+         I +G G  S+           +   
Sbjct: 418 YRQKHMLGNFENIGYSAIGYECIYNIQIMEEKQTIIAVGAGGVSKFTYPKENRLERVPNV 477

Query: 299 KHPESWLKMVRK 310
           K  E +++ V +
Sbjct: 478 KDLEHYIQRVDE 489


>gi|312897606|ref|ZP_07757023.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310621239|gb|EFQ04782.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 522

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 10/298 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG 79
           Y+H PFC  KC YC F  +    +  ++ ++ S + +++        ++  I S+F GGG
Sbjct: 72  YIHIPFCKTKCLYCAFFQN-GTDQAVEDAYVDSLIKDLERECHEPRLKNGLIHSVFIGGG 130

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  QN   +L  I     ++++ E+T+E     +       +   GVNR+SLGVQS
Sbjct: 131 TPTSLSTQNAERLLRAIRTCLPLANDYELTLEGRIHDLVPEKMDVWMAEGVNRMSLGVQS 190

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  R +GR  +    +  +   +      +  DLIY LP Q+M  W  +L+  ++ A
Sbjct: 191 FNTKVRRQVGRLDDKDTVLRRLEELQAYNQCVVIIDLIYGLPSQSMDVWRDDLECLMTSA 250

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            D   LYQL +   +   K  + G L    +      ++   +     H       ++ +
Sbjct: 251 ADGADLYQLNVYDNSDLAKRIQAGALDPAATTKEQARMFEFGREYLMKHNCRRLSAAHWA 310

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
               E SL+N            G GA  RV       +  + +  +++   V +    
Sbjct: 311 KTNRERSLYNTLAKTGVTMFPFGSGAGGRVDG----YSTMLYRTLDTYATAVEEKKKP 364


>gi|261418885|ref|YP_003252567.1| coproporphyrinogen III oxidase [Geobacillus sp. Y412MC61]
 gi|319765702|ref|YP_004131203.1| coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC52]
 gi|261375342|gb|ACX78085.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC61]
 gi|317110568|gb|ADU93060.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC52]
          Length = 499

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/316 (23%), Positives = 138/316 (43%), Gaps = 23/316 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R   I+
Sbjct: 172 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMEAVGRFLRERGIRIT 231

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I    +  +   +      V    EIT+EA  P ++     +  +K  +
Sbjct: 232 TIYYGGGTPTSITADEMDRLYAHMYDVFPDVDRVREITVEAGRPDTITPEKLEVLKKWRI 291

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++  
Sbjct: 292 DRISINPQSYIQETLKAIGRHHTVEETIHKFHLARQMGMNNINMDLIIGLPGEGLAEFTH 351

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K        + S      +    Q  T  HG  
Sbjct: 352 TLAETERLMPESLTIHTLSFKRASEMTK--NKQKYKVASREEVQAMMKAAQEWTKEHGYV 409

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 410 PYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRKITR 469

Query: 295 ISIEKHPESWLKMVRK 310
            +  K P+ + +   +
Sbjct: 470 QANPKEPKVYNEHFAE 485


>gi|295105340|emb|CBL02884.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Faecalibacterium prausnitzii SL3/3]
          Length = 489

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 135/313 (43%), Gaps = 15/313 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E+  +R        
Sbjct: 155 GSAPKTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKLVQPYVDCLCKEVAEIRAQAERAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
           ++ SI+ GGGTP+ +    +  ++  + +N+ ++  VE T+EA  P   +       ++ 
Sbjct: 215 TLCSIYIGGGTPTSLSAAQLRQLMGTVRENFDLTKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  +  L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDAVLENIGRKHSAQDILDCYADARRAGHEDINMDLIAGLPGDTVEGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L++A++   ++++++ LT+++ +      +  +       +    + L ++    + 
Sbjct: 335 EHSLRQAIALQPENITVHTLTLKRASRIVIEDQKENDYADVAAMLEKCHLLAEAGYRPYY 394

Query: 248 LHA-------YEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISI 297
           L+         E       G E  +N+         +  G G  +++    G     I  
Sbjct: 395 LYRQKNTLQNLENVGWCKPGHEGYYNIYIMEEVQTILSAGAGGSTKLVADGGKRMQRIFN 454

Query: 298 EKHPESWLKMVRK 310
            K+P  +++   +
Sbjct: 455 FKYPNEYIQRFAE 467


>gi|212637694|ref|YP_002314219.1| coproporphyrinogen III oxidase [Shewanella piezotolerans WP3]
 gi|212559178|gb|ACJ31632.1| Oxygen-independent coproporphyrinogen III oxidase [Shewanella
           piezotolerans WP3]
          Length = 442

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 151/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + +    +  F+ S   EM  ++ L       S++ GGGT
Sbjct: 60  LYAHVPFCHTLCSFCTFHRFLFKEDKARAYFV-SLRKEMDMVKNL--GYDFESMYIGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++   K     S  E++ E++P  ++   F+   +  V+R+S+GVQS 
Sbjct: 117 TTVLEDE-LARTIEHAKKL--FPSIKEVSCESDPQHLDSPGFKQL-EGLVDRMSIGVQSF 172

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L    R     +  +    I  A+ +FP ++ DLI+    QT    + +L  A   
Sbjct: 173 NDDILTMTDRIEKFGSGQQTFDKIMAAKELFPIINVDLIFGFRGQTDEVIQHDLDMASKL 232

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++      +  S+   +     ++S  +
Sbjct: 233 DPRQITTYPLMITHQT---RKSVKGKLAAPHGDMVRQYRQILNSLNGQYN----QLSAWA 285

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F          Y   Y +Y+G+G G+ S +    +    S++K    + + V      V 
Sbjct: 286 FGKTNDEGFDEYVIDYDEYLGVGSGSFSFLDDTLYVNTFSLKK----YQERVSSGHMGVE 341

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI-----ERV 371
           +++    ++      ++G      +S K +    G NLD    + +     I     +  
Sbjct: 342 QQKNYGRKEVMQYRFLLG-MFSGRLSRKYFRETFGVNLDTALFKEMTSMKAIGAIKNDPT 400

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  M
Sbjct: 401 DPDNLIVTDNGKMM 414


>gi|15613715|ref|NP_242018.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
 gi|10173768|dbj|BAB04871.1| BH1152 [Bacillus halodurans C-125]
          Length = 498

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 141/316 (44%), Gaps = 23/316 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
              + VY+  PFC  KC YC F ++    K G  E F+     E++   +        ++
Sbjct: 167 DRGVSVYIGIPFCPTKCAYCTFPAYAINGKNGSVEAFLAGLHYEIEATGKWLTDHQIPVT 226

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGV 130
           +++FGGGTP+ I  + +  + + +  ++   + V E+T+EA  P ++     +  +K  V
Sbjct: 227 TVYFGGGTPTSITAEQMDALYETLYDSFPAMNQVRELTVEAGRPDTITPEKIEVLKKWNV 286

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H+  E I    +AR++    ++ DLI  LP +   +   
Sbjct: 287 DRISINPQSFENETLQAIGRHHSVEETIEKYKMARDLGMENINMDLIIGLPGEGPKEMAR 346

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+       + L+++ L+ ++ +   K      +   + +   ++  +T S T  H   
Sbjct: 347 SLEETEKLMPESLTVHTLSFKRASTMTKNRDKYKVA--TRDEIAEMMAMTSSWTEDHEYA 404

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRV--A 294
            Y            E   ++    ESL+N+         IG+G GA S+           
Sbjct: 405 PYYLYRQKNILGNLENVGYALPEKESLYNIVIMEEVQTIIGLGCGATSKWVEPGTGNISR 464

Query: 295 ISIEKHPESWLKMVRK 310
            +  K P ++ +  ++
Sbjct: 465 HANPKDPRTYNERFKQ 480


>gi|255101912|ref|ZP_05330889.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-63q42]
 gi|255307781|ref|ZP_05351952.1| coproporphyrinogen III oxidase [Clostridium difficile ATCC 43255]
          Length = 518

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 189 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEV 248

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 249 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIKEFTVEAGRPDTITEQKLRVLKKHNV 308

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++A R  F  ++ D+I  L  + +   + 
Sbjct: 309 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEDLNMVKN 368

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + + L+++ L I++ +            L      V + +L+       GL+
Sbjct: 369 TLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEHLTQYEEMVKMIDLSMKYAKDMGLN 428

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++  G E ++N+           +G GA S+           
Sbjct: 429 PYYMYRQKHMLGNLENIGYAKEGYECIYNIQIMEEKQSNYALGAGAISKFVYVDEDRIER 488

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E +++ V +
Sbjct: 489 VENVKNVEQYIERVDE 504


>gi|150016421|ref|YP_001308675.1| coproporphyrinogen III oxidase [Clostridium beijerinckii NCIMB
           8052]
 gi|149902886|gb|ABR33719.1| Coproporphyrinogen dehydrogenase [Clostridium beijerinckii NCIMB
           8052]
          Length = 475

 Score =  203 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 70/329 (21%), Positives = 149/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E  +  +  N++ +Y+   FC  KC YC F S+ +  YK     +I++ + E++ M
Sbjct: 133 VAKAEKKIVNKDKNTIAIYIGMAFCPTKCLYCSFTSNPIGVYKKMVTPYIEALIKEIKGM 192

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                 R   I S++FGGGTP+ +  +   +I+  I   +    N+ E T+E   P ++ 
Sbjct: 193 SSYVKERKLNIESVYFGGGTPTSVSDEEFNIIMKEIYNCFIKDDNIKEFTVECGRPDTLT 252

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
            N  Q  ++ GV+RIS+  Q++ +++L  +GR H++++      +AR   F  ++ D+I 
Sbjct: 253 RNKLQTMKEYGVDRISINPQTMNDKTLNLIGRTHSSADIKEKFKMARELGFDDINMDIII 312

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLY 236
            LP +T           +    D ++++ L +++G+  Y+       + + S++  + +Y
Sbjct: 313 GLPGETHEDVIHTKNELIKLKPDSITVHGLALKRGSRMYEEFILKKGIQITSQDEIIKMY 372

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAH 283
             ++++    G+  Y            E   ++  G E ++N+         I +G  A 
Sbjct: 373 EESRNLAENLGISPYYMYRQKNMVGNMENLGYAKEGKECIYNIQMIEEKQTVIALGAAAV 432

Query: 284 SRVKV--GSHRVAISIEKHPESWLKMVRK 310
           S+V              K    ++  + +
Sbjct: 433 SKVIFLEEDRLERFPNLKDLHEYVSRIDE 461


>gi|160945513|ref|ZP_02092739.1| hypothetical protein FAEPRAM212_03042 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443244|gb|EDP20249.1| hypothetical protein FAEPRAM212_03042 [Faecalibacterium prausnitzii
           M21/2]
          Length = 489

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 135/313 (43%), Gaps = 15/313 (4%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
           G    +  +Y+  PFC  +C YC F S ++ R +   + ++     E+  +R        
Sbjct: 155 GSAPKTYSLYIGIPFCPSRCSYCSFVSCNLDRDRKMVQPYVDCLCKEVAEIRAQAERAGL 214

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
           ++ SI+ GGGTP+ +    +  ++  + +N+ ++  VE T+EA  P   +       ++ 
Sbjct: 215 TLCSIYIGGGTPTSLSAAQLRQLMGTVRENFDLTKVVEYTVEAGRPDCTDAEKLAVIKEY 274

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
           G  RIS+  Q+  +  L  +GR H+A + +     AR      ++ DLI  LP  T+  +
Sbjct: 275 GATRISINPQTFSDAVLANIGRKHSAQDILDCYADARRAGHEDINMDLIAGLPGDTVEGF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L++A++   ++++++ LT+++ +      +  +       +    + L ++    + 
Sbjct: 335 EHSLRQAIALQPENITVHTLTLKRASRIVIEDQKENDYADVAAMLEKCHLLAEAGYRPYY 394

Query: 248 LHA-------YEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISI 297
           L+         E       G E  +N+         +  G G  +++    G     I  
Sbjct: 395 LYRQKNTLQNLENVGWCKPGHEGYYNIYIMEEVQTILSAGAGGSTKLVADGGKRMQRIFN 454

Query: 298 EKHPESWLKMVRK 310
            K+P  +++   +
Sbjct: 455 FKYPNEYIQRFAE 467


>gi|254471048|ref|ZP_05084451.1| HutW protein [Pseudovibrio sp. JE062]
 gi|211960190|gb|EEA95387.1| HutW protein [Pseudovibrio sp. JE062]
          Length = 449

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 139/378 (36%), Gaps = 28/378 (7%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGG 79
           Y+H PFC   C +C F  +  + +     +  + + E++       +    I++++FGGG
Sbjct: 61  YLHVPFCANHCLFCGFYRNKWQEEHS-APYADALIKELELEASSPTSQSAPINAVYFGGG 119

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +   ++A ++  I + + +S++ EIT+E      +         AG NR S GVQS
Sbjct: 120 TPTALHANDLARVIRRIRELYPLSADCEITVEGRIFHFDDEKIDACLDAGANRFSTGVQS 179

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  +  GR     EAI     L       +  DLI  LP Q+   W  +L+  +   
Sbjct: 180 FNTKVRKRQGRKATGEEAIRFFEGLRDRNRAAVVCDLILGLPYQSEEVWRQDLKTVVDLE 239

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +D + LY L +  G+L  K       D   P       +Y         +G      S+ 
Sbjct: 240 LDGVDLYTLAVFPGSLLSKAIAKGSCDPAAPLPQQG-GMYGEGLEYMRQYGWKQISSSHW 298

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
                E +L+N       D +  G GA   +   S+ +   I      +++ +      +
Sbjct: 299 GRQTRERNLYNTLIKSGADCLAFGSGAGGNINGYSYGIHGGIV----DYMRCLEDGEKPL 354

Query: 316 VEKEFLSSEQQADEFL---MMGLRLREGISVKDWEML------AGRNLDIECERNLQRQG 366
                         FL   +  +RL     +   E           ++D     N +R G
Sbjct: 355 SRLHRTDPLSSPLNFLAAGIEEMRL----DLARLERADPKANGFRSSIDP-LLSNWRRTG 409

Query: 367 FIERVQFSRLRCTQRGMT 384
            I       +  T  G  
Sbjct: 410 LI--AGEEIISLTTAGRF 425


>gi|170760684|ref|YP_001788376.1| coproporphyrinogen III oxidase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407673|gb|ACA56084.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 476

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRGLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCKKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGMKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|255656728|ref|ZP_05402137.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-23m63]
 gi|296452445|ref|ZP_06894146.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP08]
 gi|296877794|ref|ZP_06901820.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP07]
 gi|296258775|gb|EFH05669.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP08]
 gi|296431245|gb|EFH17066.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           difficile NAP07]
          Length = 518

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 140/316 (44%), Gaps = 20/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 189 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKIIRETNKEV 248

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 249 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIREFTVEAGRPDTITEQKLRVLKKHNV 308

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++A R  F  ++ D+I  L  + +   + 
Sbjct: 309 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEDLNMVKN 368

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L      + + L+++ L I++ +            L      V + +L+       GL+
Sbjct: 369 TLDEIKKLSPESLTVHTLAIKRASNLNINMDRYKEHLTQYEEMVKMIDLSMKYAKDMGLN 428

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++  G E ++N+           +G GA S+           
Sbjct: 429 PYYMYRQKHMLGNLENIGYAKEGYECIYNIQIMEEKQSNYALGAGAISKFVYVDEDRIER 488

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E +++ V +
Sbjct: 489 VENVKNVEQYIERVDE 504


>gi|196233023|ref|ZP_03131872.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
 gi|196223001|gb|EDY17522.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
          Length = 411

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 157/379 (41%), Gaps = 17/379 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGGTPSLIE 85
           C K+C +C F  +  +     + ++ + + E++      L   R    I+FGGGTPS + 
Sbjct: 30  CRKRCHFCYFRVYTDKNADEIKRYLDAGIAELEIYAKSPLIRGRKPRFIYFGGGTPSYLS 89

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  + D + +        E+  EA P ++        R+ GV R+SLGV++ +   L
Sbjct: 90  VAQLKSLTDRMKELLPWDEAEEVAFEAEPGTLNEAKLSAIREIGVTRLSLGVENFDSHIL 149

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              GR H   E   A + AR+I FP+++ DLI  + ++T   W   +++ +    D +++
Sbjct: 150 EINGRAHRTDEIYRAYNFARSIGFPQINIDLISGMVEETDENWRENVRKTVELLPDSVTI 209

Query: 205 YQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           YQ+ +   T  YK M  +G L  P  N       +  + +    +     S ++ +    
Sbjct: 210 YQMEVPYNTGIYKEMKAEGKLTAPVANWHTKRGWVDYAFSELEKVGYTVTSGYTAVRDPQ 269

Query: 264 L----HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
                +    W   D +G+G  + S +     +           +L+ +++    +    
Sbjct: 270 KTKFVYRDALWSGADLVGLGVASFSHIAGTHFQNITEFS----QYLEAIQRGDLPISRAM 325

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSRL 376
             + E++     ++ ++L   ++ + ++   G N+          L+ +  I   +   +
Sbjct: 326 TTTEEERMIREFILQMKL-GRVNQQYFQEKFGVNVGERFREQFDDLRTRKLIS-DEGGWI 383

Query: 377 RCTQRGMTMLDSVIANLAV 395
             T+  +  +D+++    +
Sbjct: 384 VLTREALLKVDTLLHAFFL 402


>gi|323496777|ref|ZP_08101822.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
 gi|323318202|gb|EGA71168.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
          Length = 457

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/386 (20%), Positives = 158/386 (40%), Gaps = 21/386 (5%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +  GQ S    +Y+H PFC  +C +C+F  +    K+  +++ ++ + E+         +
Sbjct: 53  DQQGQKSAKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDDYFEALMIEIAQKAAQPWTQ 111

Query: 70  S--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           +    +++ GGGTP+ +  + +  +   I +++ +S++ EIT+E   +      F+   +
Sbjct: 112 TGLFHAVYIGGGTPTDLSAEQVERLGKAIRRSFPLSTDCEITLEGRINRFSDEMFERSLE 171

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
            G NR S G+QS   +  R   R  +  + +A +  L+      +  DL+Y LP QT   
Sbjct: 172 GGFNRYSFGIQSFNTKVRRSAKRLDDREDVMARVASLSATQQAPIIVDLLYGLPYQTEEV 231

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSA 245
           +E +L   ++     L LYQL +        M + G +  P+       +Y +     + 
Sbjct: 232 FEQDLNDFMATGAHGLDLYQLVVGGSAPMINMVEKGRIPAPATTAEKAAMYKIGSDFMAK 291

Query: 246 HGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           H L    +++ +    E S +N     Y + + I                +   +  ES+
Sbjct: 292 HHLTQLSVNHWTRDNRERSQYNSLAKTYAEVLPI----GCGAGGNIGGFGMMNHRTLESY 347

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR------LREGISVKDWEMLAGRNLDIEC 358
           +  ++     VV    L+ +Q   E L   L+      +   I++ D+   +        
Sbjct: 348 MNAIKSGDSTVV---MLT-KQHFLEPLFAALKSGFDHGVVSKIALPDFNGQSSFEFLRPL 403

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMT 384
               Q++G   +V+   L  T  G  
Sbjct: 404 FEVWQQRGL-AQVEDDYLVLTLAGRF 428


>gi|52784833|ref|YP_090662.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|163119326|ref|YP_078263.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52347335|gb|AAU39969.1| HemZ [Bacillus licheniformis ATCC 14580]
 gi|145902832|gb|AAU22625.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
          Length = 502

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 23/310 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG--PRSISSIF 75
           + +Y+  PFC  KC YC F ++  R + G+  +F+     EMQ + +       SI++++
Sbjct: 171 VSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQKIGEWLKENDVSITTVY 230

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           FGGGTP+ I  + + L+ + + +++    N+ E+T+EA  P ++        +K  ++RI
Sbjct: 231 FGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVTVEAGRPDTITEEKLAVLKKWNIDRI 290

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS E ++L+ +GR+H   E I   HL+RN     ++ DLI  LP + + ++   L 
Sbjct: 291 SINPQSYENETLKAIGRHHTVEETIEKYHLSRNAGMSNINMDLIIGLPGEGVKEFRHSLS 350

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
                  + L+++ L+ ++ +   K      +        V + +   S T  HG H Y 
Sbjct: 351 ETEKLMPESLTVHTLSFKRASEMTKNRHKYKVA--DREEIVAMMDDAVSWTKQHGYHPYY 408

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VAISI 297
                      E   +S  G ES++N+         IGIG GA S+            S 
Sbjct: 409 LYRQKNILGNLENIGYSLPGQESIYNIMIMEEKQTIIGIGCGAASKFVDPRSGKITHFSN 468

Query: 298 EKHPESWLKM 307
            K P+++   
Sbjct: 469 PKDPKTYNDR 478


>gi|319650177|ref|ZP_08004324.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
 gi|317398109|gb|EFV78800.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
          Length = 504

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 70/310 (22%), Positives = 141/310 (45%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTG--PRSIS 72
            N + +Y+  PFC  KC YC F ++    + G  N F+     EM+ + +        I+
Sbjct: 170 KNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVNSFLGGLHFEMRKIGEWLKENDVKIT 229

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGV 130
           ++++GGGTP+ I  + + ++ + +  ++    N+ E+T+EA  P ++     +  +K  +
Sbjct: 230 TVYYGGGTPTSITAEEMDMLYEEMYDSFPDVENIREVTVEAGRPDTITPEKLEVLKKWNI 289

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E +   HLARN+    ++ DLI  LP + + ++  
Sbjct: 290 DRISINPQSYIQETLKAIGRHHTVEETVDKFHLARNMGMNNINMDLIIGLPGEGVPEFSH 349

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   K        +        + ++ +  T  H  H
Sbjct: 350 TLDETEKLMPESLTVHTLSFKRASEMTK--NKQKYKVAEREEIEKMMDMAEDWTKQHNYH 407

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 408 PYYLYRQKNILGNLENVGYALPNQESIYNIMIMEEQQTIIGLGCGASSKFIDPQTGKITH 467

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 468 FANPKDPKSY 477


>gi|319646743|ref|ZP_08000972.1| HemZ protein [Bacillus sp. BT1B_CT2]
 gi|317391331|gb|EFV72129.1| HemZ protein [Bacillus sp. BT1B_CT2]
          Length = 528

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 23/310 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG--PRSISSIF 75
           + +Y+  PFC  KC YC F ++  R + G+  +F+     EMQ + +       SI++++
Sbjct: 197 VSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQKIGEWLKENDVSITTVY 256

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           FGGGTP+ I  + + L+ + + +++    N+ E+T+EA  P ++        +K  ++RI
Sbjct: 257 FGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVTVEAGRPDTITEEKLAVLKKWNIDRI 316

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS E ++L+ +GR+H   E I   HL+RN     ++ DLI  LP + + ++   L 
Sbjct: 317 SINPQSYENETLKAIGRHHTVEETIEKYHLSRNAGMSNINMDLIIGLPGEGVKEFRHSLS 376

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
                  + L+++ L+ ++ +   K      +        V + +   S T  HG H Y 
Sbjct: 377 ETEKLMPESLTVHTLSFKRASEMTKNRHKYKVA--DREEIVAMMDDAVSWTKQHGYHPYY 434

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VAISI 297
                      E   +S  G ES++N+         IGIG GA S+            S 
Sbjct: 435 LYRQKNILGNLENIGYSLPGQESIYNIMIMEEKQTIIGIGCGAASKFVDPRSGKITHFSN 494

Query: 298 EKHPESWLKM 307
            K P+++   
Sbjct: 495 PKDPKTYNDR 504


>gi|218663762|ref|ZP_03519692.1| coproporphyrinogen III oxidase [Rhizobium etli IE4771]
          Length = 391

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 75/381 (19%), Positives = 147/381 (38%), Gaps = 25/381 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEPQNIA 90
           C YC  ++ V R       ++Q    EM  +   T  P +I  + FGGGTP++I P+ + 
Sbjct: 2   CWYCGCHTKVTRGDQPILTYLQMLQEEMCLVSAKTKTPLNIDQLHFGGGTPTIIGPEKLL 61

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            ++  +  N+  + + ++ +E +P ++E        +A V+R S+GVQ+ +    + + R
Sbjct: 62  GLIGLLKANFDFTGSSQLALEIDPRTLEEEMAAALGEAEVHRASIGVQTFDPVVQKAINR 121

Query: 151 NHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
             +  + + A+   R      ++FDLIY LP QT+       + A+    +  +++    
Sbjct: 122 AQSEEQTMEAVSRLRQAGVVSINFDLIYGLPHQTVDSCIETTRIAIEMRPERFAVFGYAH 181

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AE 262
              +         +  LP+    V           A G     I + +          A 
Sbjct: 182 VP-SFKKHQLLINEGALPNTESRVAQAEAIAEYLIAAGYRRIGIDHFALPEDSLAVAQAN 240

Query: 263 SLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                N+  Y        IG G  A  R+  G     +  E  P  + + +     AV++
Sbjct: 241 GQLRRNFQGYTSDPCETLIGFGASAIGRMAGG----YVQNEALPGHYAQRIASGNFAVMK 296

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN-----LQRQGFIERVQ 372
              LS E +    ++  L       +       G +  I  + N     L+R G +E+  
Sbjct: 297 GHRLSDEDRLRASVIERLMCDFQADIPALAAEHGFDPGILLDHNDRLTMLERDGVLEK-A 355

Query: 373 FSRLRCTQRGMTMLDSVIANL 393
              +R  ++   ++ +V +  
Sbjct: 356 GGIVRLRKKKQFLIRAVASAF 376


>gi|168179550|ref|ZP_02614214.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|182669538|gb|EDT81514.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
          Length = 476

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 73/329 (22%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRSLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +LR +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLRNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGMKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|148381007|ref|YP_001255548.1| radical SAM domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153932471|ref|YP_001385378.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. ATCC
           19397]
 gi|153936844|ref|YP_001388785.1| coproporphyrinogen III oxidase [Clostridium botulinum A str. Hall]
 gi|148290491|emb|CAL84619.1| putative oxidase [Clostridium botulinum A str. ATCC 3502]
 gi|152928515|gb|ABS34015.1| radical SAM domain protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152932758|gb|ABS38257.1| radical SAM domain protein [Clostridium botulinum A str. Hall]
 gi|322807357|emb|CBZ04931.1| hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Clostridium botulinum
           H04402 065]
          Length = 476

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRNLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGMKPYYMYRQKNMLGNMENVGYSKESKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|170755567|ref|YP_001782691.1| coproporphyrinogen III oxidase [Clostridium botulinum B1 str. Okra]
 gi|169120779|gb|ACA44615.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
          Length = 476

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRSLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGIKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|254976336|ref|ZP_05272808.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-66c26]
 gi|255093721|ref|ZP_05323199.1| coproporphyrinogen III oxidase [Clostridium difficile CIP 107932]
 gi|255315473|ref|ZP_05357056.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-76w55]
 gi|255518136|ref|ZP_05385812.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-97b34]
 gi|255651252|ref|ZP_05398154.1| coproporphyrinogen III oxidase [Clostridium difficile QCD-37x79]
 gi|260684316|ref|YP_003215601.1| coproporphyrinogen III oxidase [Clostridium difficile CD196]
 gi|260687975|ref|YP_003219109.1| coproporphyrinogen III oxidase [Clostridium difficile R20291]
 gi|260210479|emb|CBA64953.1| putative coproporphyrinogen III oxidase [Clostridium difficile
           CD196]
 gi|260213992|emb|CBE06105.1| putative coproporphyrinogen III oxidase [Clostridium difficile
           R20291]
          Length = 518

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 189 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEV 248

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 249 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIKEFTVEAGRPDTITEQKLRVLKKHNV 308

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++A R  F  ++ D+I  L  + +   + 
Sbjct: 309 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEELNMVKN 368

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + + L+++ L I++ +            L      V + +L+       GL+
Sbjct: 369 TLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEHLTQYEEMVKMIDLSMKYAKDMGLN 428

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++  G E ++N+           +G GA S+           
Sbjct: 429 PYYMYRQKHMLGNLENIGYAKEGYECIYNIQIMEEKQSNYALGAGAISKFVYVDEDRIER 488

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E +++ V +
Sbjct: 489 VENVKNVEQYIERVDE 504


>gi|114561264|ref|YP_748777.1| coproporphyrinogen III oxidase [Shewanella frigidimarina NCIMB 400]
 gi|114332557|gb|ABI69939.1| Radical SAM domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 445

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C +C F+  + R    +E F+ +   EMQ  + L       S++ GGGT
Sbjct: 63  LYAHIPFCHTLCSFCTFHRFLFREDKAREYFV-ALRKEMQMAKDL--GYEFESMYIGGGT 119

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +A  ++            E++ E++P  +    F+  +   V+R+S+GVQS 
Sbjct: 120 TTVLEDE-LARTIEHAKNL--FPGIKEVSCESDPQHLASPEFKQLKGL-VDRMSIGVQSF 175

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+   R     +  +    I  A+ +FP ++ DLI+    QT    + +L+ A   
Sbjct: 176 DDGILKMTDRLDKFGSGQQTFDRIMAAKELFPIINVDLIFGFRGQTDEIIQSDLEMASKL 235

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L I   T   +    G L  P  ++     N  + I +       ++S  +
Sbjct: 236 DPRQITTYPLMITHQT---RKSVKGQLAAPHGDMV----NQYRQILNHLTGQYTQLSAWA 288

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F          Y   Y +Y+G+G G+ S +    +    S++K    + + + +   AV 
Sbjct: 289 FGKTNDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLKK----YQQRIAEGRMAVE 344

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFI--ERV 371
           +++    ++      ++G      +S K +      NLD    +    ++  G +  + V
Sbjct: 345 QQKKYQLKEVMQYRFLLG-MFSGRLSRKYFRDTFNVNLDTALFKEMTSMKAMGALKNDPV 403

Query: 372 QFSRLRCTQRGMTM 385
               L  T  G  +
Sbjct: 404 NPDELIVTDNGKML 417


>gi|330829949|ref|YP_004392901.1| Coproporphyrinogen III oxidase [Aeromonas veronii B565]
 gi|328805085|gb|AEB50284.1| Coproporphyrinogen III oxidase, putative [Aeromonas veronii B565]
          Length = 456

 Score =  202 bits (514), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 143/372 (38%), Gaps = 18/372 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFG 77
            +Y+H PFC K+C +C+F  +          ++ +  T +       L      S+++ G
Sbjct: 60  ALYIHIPFCRKRCSFCNFFEN-GANPARINRYVNALCTSLAQAADTPLAQSMPFSAVYVG 118

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +  +L  + + + ++++ E+T+E   +  +   +Q     G NR S GV
Sbjct: 119 GGTPTDMSADEL-AMLAAVIRRFPLAADAEVTLEGRLNGFDDEKWQVALAGGFNRFSFGV 177

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + +  +   R  +    +  +  L R+    +  DLI+ LP Q    W+ +++  ++
Sbjct: 178 QSFDTRVRQQAARFDDRETLLTRLGELTRDDAAVIVADLIFGLPGQDDAVWQQDIRDVMA 237

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             V  + LYQL   +GT   +  + G L  L        +Y    +   AHG      S+
Sbjct: 238 SGVHGVDLYQLIAMQGTNLERAQEKGTLDWLADGQQRAAMYAYGGAQLEAHGWERLSCSH 297

Query: 256 HSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
                  +S +N    R  + +  G GA   +            +    W   +     A
Sbjct: 298 WRRSPAEQSRYNQMAKRGAEILPFGAGAGGSILGHGLMYG----RDLAPWHDALASGKRA 353

Query: 315 VVEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
                  +   + D      LR  L  G+   D          +      Q+ G  E ++
Sbjct: 354 PGMVMGRNPNARMD----GLLRGALDSGVLALDRLPTPLLTHLMPLFAAWQQHGLAE-IE 408

Query: 373 FSRLRCTQRGMT 384
            +RL+ T  G  
Sbjct: 409 NARLQLTLAGRF 420


>gi|319940966|ref|ZP_08015303.1| hypothetical protein HMPREF9464_00522 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805539|gb|EFW02334.1| hypothetical protein HMPREF9464_00522 [Sutterella wadsworthensis
           3_1_45B]
          Length = 531

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 76/375 (20%), Positives = 150/375 (40%), Gaps = 16/375 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPR 69
           T +   SL  Y+H PFC  +C YC F  +  + +   E + +  + E++    R      
Sbjct: 55  TPRSGRSLA-YIHVPFCETRCLYCMFYQNPWKEEATTE-YAKQLVKELELWSDRAAQNAA 112

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I++++FGGGTP+   P +I L++  + K   ++++ EIT+E    +          ++G
Sbjct: 113 PINALYFGGGTPTAFSPDDIRLVMGAVKKYLPLANDCEITLEGRIHNFSDAKMDAAIESG 172

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNR SLGVQ+   Q  + + R  +    I  +    +     +  D+IY  P QTM  WE
Sbjct: 173 VNRFSLGVQTFNTQIRQSVMRVDDRDTIIRRLDKLCSYNNASVVCDMIYGFPGQTMEVWE 232

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHG 247
            +L+ A S  +D +  YQL + + +   +   +G L    + +   D +  +    ++  
Sbjct: 233 DDLKTAASLHLDGVDCYQLNVFEKSPLARYIANGKLPRAATSDEKADFFAKSVEYFTSQN 292

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
                 ++      E +++N       D +  G GA  R+   S+     +E+    + +
Sbjct: 293 WRRLSNNHWGRTIRERNIYNAWGKSACDCLAFGCGAGGRLAGYSYM----MERKLADYYR 348

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNL 362
           ++ +    V      +        +         I++K      G     +L        
Sbjct: 349 LLGEGRKPVAFAMAPTHNWHLLRTI-SSEMESGAINLKAIGRQFGGLPLEDLAKVVLSQW 407

Query: 363 QRQGFIERVQFSRLR 377
              G + +      +
Sbjct: 408 CEAGLLVKRGDWYYQ 422


>gi|54309282|ref|YP_130302.1| coproporphyrinogen III oxidase [Photobacterium profundum SS9]
 gi|46913714|emb|CAG20500.1| putative coproporphyrinogen III oxidase [Photobacterium profundum
           SS9]
          Length = 483

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 132/312 (42%), Gaps = 10/312 (3%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           + T   S    +YVH PFC  +C YC+F  +     +  +++  + + E++   +    +
Sbjct: 71  STTPSQSGKRCLYVHIPFCRVRCTYCNFFQYASSQSL-IDDYFAALMVELELKARQAWTQ 129

Query: 70  --SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
                +++ GGGTP+ +    I  +   I +++ ++++ E+T+E   +      F    +
Sbjct: 130 AAPFHAVYIGGGTPTDLTAAQIKRLGQMIRQHFPLTTDCELTLEGRINRFTDEMFDSALE 189

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
            G NR S GVQS + Q  R   R  +    +  I    +     +  DL+Y LP Q +T 
Sbjct: 190 GGFNRFSFGVQSFDTQVRRKAKRLDDKDVVLERIQALSSSESAPIVIDLLYGLPYQDLTV 249

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSA 245
           W+ +L   L      + LYQL    GT    + ++G L  P        ++    +  + 
Sbjct: 250 WQQDLNDFLDSGAHGVDLYQLIEMGGTPMKGLVENGRLPEPADTPTKATMFENGVNFMAK 309

Query: 246 HGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
           H +    +++ +    E S++N       + + +G GA   V            ++ +++
Sbjct: 310 HHMRRLSVNHWARDNRERSVYNSLAKTSAEVLPLGAGAGGNVSG----YGFMQHRNLDTY 365

Query: 305 LKMVRKNGHAVV 316
           +  V K    ++
Sbjct: 366 MASVSKGEMPLM 377


>gi|296933177|gb|ADH93700.1| NocB [Amycolatopsis fastidiosa]
          Length = 391

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 95/389 (24%), Positives = 163/389 (41%), Gaps = 40/389 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-------RRYKVGQENFIQSFLTEMQWM-RQLTGPRS 70
           L +YVH PFC  KC +CD+   +       +     ++N++++ +TE++    QL     
Sbjct: 2   LMLYVHVPFCHSKCTFCDWVQAIPTKDLLRKPEDSVRKNYVRALVTEIETRGAQLRAAGQ 61

Query: 71  ISSI-FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  + ++GGGT S ++      I   +   + +S+  E TIE +P +V+    + +R  G
Sbjct: 62  VPYVVYWGGGTASSLDNAEAEAIWGALDSAFDLSTVAEATIECSPDTVDKAKLEFFRGLG 121

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQS ++  LR LGR H A EA   +H AR   F  +S D++   P Q + +  
Sbjct: 122 FNRVSSGVQSFDDARLRRLGRRHTAGEADRIVHHAREAGFDEVSIDIMSGFPDQELDELR 181

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +++A+S  + HLSLY      GT   +     +            +   + +    GL
Sbjct: 182 ATVEKAVSLPLTHLSLYSFRPTPGTFMRRKLAGTEKRAYLRKQQAL-FTEARRMIIDAGL 240

Query: 249 HAY------EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
             Y       +S  + +         +    D  G G GA S V             H +
Sbjct: 241 PEYASGYFGRVSPFAAM--------YFQLRADTAGFGSGAISLVD-------RQFLSHAK 285

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN- 361
             L    ++  A         ++    FL  GL + +G+  ++W +  G +LD    R  
Sbjct: 286 GKLHAYIQDPLAYDIDVPAGQDRVLVSFLQAGLAMFDGVLREEWRVSTGTDLDEVLTRPS 345

Query: 362 -------LQRQGFIERVQFSRLRCTQRGM 383
                  L+ +G IE  +  RL     G+
Sbjct: 346 IAPLADFLRGRGLIEDERGIRLDPRLAGL 374


>gi|313897068|ref|ZP_07830615.1| putative coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|312974515|gb|EFR39983.1| putative coproporphyrinogen dehydrogenase [Selenomonas sp. oral
           taxon 137 str. F0430]
          Length = 260

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 121/264 (45%), Gaps = 10/264 (3%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS ++  LR +GR H A EA AA   AR   F  +S DL+Y LP QT+   +  +   +
Sbjct: 1   MQSFDDALLRRIGRVHTAEEARAAFRAARAAGFTNISIDLMYGLPGQTLHDLQESVHAVI 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A +H+S+Y LT+E+GT F      G L LP E  A ++Y+   +   A G   YEISN
Sbjct: 61  ALAPEHISVYGLTVEEGTPFAAAQAAGRLDLPPEETAEEMYDYLMAELPARGYLRYEISN 120

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA- 314
            +  G ES HNL YWR   Y+G+G  AH  V      V    E+   ++++ V       
Sbjct: 121 FARRGFESRHNLGYWRSVPYLGVGAAAHGYVDN----VRWENERDTAAYIRRVMAGEDVR 176

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERV 371
             E    +     +E+  + LR  EGI   D+    G   +         L  +G ++R 
Sbjct: 177 RAENGARTRTAAMEEYAFLALRTAEGIDEADFHRTWGVPFEEVYGAVLPRLIEKGLLKRT 236

Query: 372 QFSRLRCTQRGMTMLDSVIANLAV 395
                  T  GM   + V A   +
Sbjct: 237 D-GFTALTPLGMKYGNEVFAEFLL 259


>gi|304405270|ref|ZP_07386930.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
 gi|304346149|gb|EFM11983.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
          Length = 460

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 149/377 (39%), Gaps = 19/377 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSI 74
            L +Y+H PFC   C +C +    V +++     ++ + + E++            I+S+
Sbjct: 44  PLNLYIHVPFCDSACSFCPYYKLGVNKFRDFNAEYLDAVVKEIEMYAATPYFQQHKIASV 103

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRI 133
            FGGG P ++  ++   ++  I K++ V  N   + E   +SV  V+  +G    G+NR+
Sbjct: 104 HFGGGNPFMMSLKDYERLIGTIHKHFKVEINDNWSSEGTINSVKSVDYMKGLLSLGINRV 163

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S G+Q+  E   R      +  +  + I   +        D++Y LP Q++     +L++
Sbjct: 164 SFGIQTFNEDVRRKTRIKTSIDQIYSGIDKLKTAGMDYCIDMMYNLPDQSIETMISDLEK 223

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNLTQSITSAHGLHAYE 252
                  H+ +Y L +   T   K  K+    + PS+   + ++ +       +G     
Sbjct: 224 VTELDPYHIDMYNLAVFPNTKLDKQIKNKKYEISPSQENQLMMFKIGHQWLMDNGYKQII 283

Query: 253 ISNHSFLGAES-LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
            S +S    E  + +L Y    + +GIG  +   V    ++       + ++++  V + 
Sbjct: 284 TSTYSRRQQEPHIGDLLYLTNNNVLGIGASSRGYVDGHVYKNVC----NLDTYITEVSEG 339

Query: 312 GHAVVEKEFLSSEQQADEFL--MMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
                     +  +  D  +             + D+E  A +         +   G  E
Sbjct: 340 RFPADLAYKSTLAEHHDRKMVFFPITMKIRREDIPDYERFAPK------LETVVELGLAE 393

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   LR T++G+   
Sbjct: 394 WVEDE-LRLTEQGLIYS 409


>gi|153939779|ref|YP_001392334.1| coproporphyrinogen III oxidase [Clostridium botulinum F str.
           Langeland]
 gi|152935675|gb|ABS41173.1| radical SAM domain protein [Clostridium botulinum F str. Langeland]
          Length = 476

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRSLKIQCVYFGGGTPTSVNDAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETETLAKDLGIKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|299537591|ref|ZP_07050884.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
 gi|298726960|gb|EFI67542.1| coproporphyrinogen III oxidase [Lysinibacillus fusiformis ZC1]
          Length = 501

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 25/315 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           + VY+  PFC  KC YC F ++     R +     F+     E++ M +        I+S
Sbjct: 174 ISVYIGIPFCPTKCAYCTFPAYAIGSNRKQGRVTTFLDGLHIELREMGKWLKDNNMKITS 233

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVN 131
           I++GGGTP+ IE   +  +   + +++     + E+T+EA  P ++     +  +K G++
Sbjct: 234 IYWGGGTPTSIEADEMDALYQTMYESFPNPETIREVTVEAGRPDTITPEKLEVLKKWGID 293

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L+ +GR+H   E I    LAR      ++ DLI  LP + + +++  
Sbjct: 294 RISVNPQSYTDETLKAIGRHHTVQETIDKFWLARESGMNNINMDLIIGLPNEGIEEFQHS 353

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ +     + L+++ L+ ++ +   +        +   +   ++  + Q  T  +    
Sbjct: 354 LEESAKMQPESLTVHTLSFKRASEMTR--NKDKYKVADRDTVAEMMEMAQIWTKENDYVP 411

Query: 251 Y------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAI 295
           Y            E   +S  G ES++N+         +GIG GA S+            
Sbjct: 412 YYLYRQKNILGNLENVGYSKAGEESIYNIVIMEEVQTILGIGCGASSKFVHPETGRITQF 471

Query: 296 SIEKHPESWLKMVRK 310
              K P +++    +
Sbjct: 472 HNPKDPAAYIMTFEE 486


>gi|291542889|emb|CBL15999.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Ruminococcus bromii L2-63]
          Length = 479

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/320 (20%), Positives = 139/320 (43%), Gaps = 22/320 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTG-- 67
           +      S  +YV  PFC  +C YC F  + + R +   E + +    E++   ++    
Sbjct: 148 LELSKPESFSLYVGIPFCPSRCSYCSFVMASIERAEKLIEPYTKLLCEEIKRTAEIANKL 207

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
              + +++FGGGTP+ +  + +  +L  +  ++ +S+  E T+EA  P ++++      +
Sbjct: 208 GLRLETVYFGGGTPTTLSAEQLDTVLGTVNNSFDMSTCREFTVEAGRPDTIDIAKLFALK 267

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           +  V+RIS+  Q++  + L+ +GR H A +   A  LAR   F  ++ DLI  LP  T  
Sbjct: 268 ENKVDRISINPQTVNNEVLKTIGRKHTAQQFFDAFELARKCGFDNINTDLIAGLPTDTTE 327

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++  L   +    + ++++ L +++ +      +   L L     A ++   TQ++   
Sbjct: 328 SFKNSLDSIVRLNAECITVHTLCMKRASRLTT--EGVTLDLQQARDAREMLAYTQNVLGQ 385

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV--KVGS 290
           +    Y            E    S  G ESL+N+         +  G G  +++      
Sbjct: 386 NEYIPYYMYRQSRMVGNLENVGWSKRGFESLYNVYVMDETHTILACGSGGVTKLKRNNPD 445

Query: 291 HRVAISIEKHPESWLKMVRK 310
           +   I   K+P  ++    +
Sbjct: 446 YLERIFNFKYPYEYIDRFDE 465


>gi|126649445|ref|ZP_01721686.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
 gi|126593770|gb|EAZ87693.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
          Length = 501

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/329 (22%), Positives = 144/329 (43%), Gaps = 28/329 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           + VY+  PFC  KC YC F ++     R +     F+     E++ M +        I+S
Sbjct: 174 ISVYIGIPFCPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKDNNMKITS 233

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVN 131
           I++GGGTP+ IE   +  +   + +++     + E+T+EA  P ++     +  +K G++
Sbjct: 234 IYWGGGTPTSIEADEMDALYQTMYESFPNPETIREVTVEAGRPDTITPEKLEVLKKWGID 293

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L+ +GR+H   E I    LAR      ++ DLI  LP + + +++  
Sbjct: 294 RISVNPQSYTDETLKAIGRHHTVQETIDKFWLARESGMNNINMDLIIGLPNEGIEEFQHS 353

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  +     + L+++ L+ ++ +   +        +   +   ++  + Q  T  +    
Sbjct: 354 LVESAKMQPESLTVHTLSFKRASEMTR--NKDKYKVADRDTVAEMMQMAQDWTKENDYVP 411

Query: 251 Y------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAI 295
           Y            E   +S  G ES++N+         +GIG GA S+            
Sbjct: 412 YYLYRQKNILGNLENVGYSKAGEESIYNIVIMEEVQTILGIGCGASSKFVHPETGKITQF 471

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSE 324
              K P +++    +   A+ +K  L  E
Sbjct: 472 HNPKDPAAYIMTFEE---AIGKKIELLDE 497


>gi|282600881|ref|ZP_05980013.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
 gi|282571253|gb|EFB76788.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Subdoligranulum variabile DSM 15176]
          Length = 487

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 130/324 (40%), Gaps = 30/324 (9%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTG 67
           + G       VY   PFC  +C YC F S     K  +     ++     E+  +RQ   
Sbjct: 147 LAGADPMDCSVYAGIPFCPTRCSYCSFVSRTVGDKATRALVQPYVDKLCEELTAIRQTAD 206

Query: 68  PR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQG 124
                I + + GGGTP+ +    +  ++  IA+ + +S+  E T+EA  P        + 
Sbjct: 207 RCGLHIRTFYIGGGTPTSLSAAQLEQLMGHIARTFDLSTLDEYTVEAGRPDCTNAEKLRI 266

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQT 183
            ++ G  RIS+  Q+  ++ LR +GR H A + I     AR      ++ DLI  LP  T
Sbjct: 267 IKQYGATRISINPQTFSDEVLRNIGRRHTAQDIIDCFAAARAAGHQNINMDLIAGLPGDT 326

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  +   L++A++   ++++++ LT+++ +     H+  D    +  +A           
Sbjct: 327 VEGFTHSLEQAIALDPENITVHTLTLKRASNLVVEHRAADYDDVAAMLAR------CDRL 380

Query: 244 SAHGLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGS 290
              G   Y            E    +  G E L+N+         +  G G  +++ +  
Sbjct: 381 QQAGYRPYYLYRQKGTLQNLENIGWAKPGKECLYNIYIMEEIHTILSAGAGGSTKLVIPG 440

Query: 291 HRV----AISIEKHPESWLKMVRK 310
            R      I   K+P  ++    +
Sbjct: 441 KRHGKIERIFNFKYPTEYIDRFAE 464


>gi|311032494|ref|ZP_07710584.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13]
          Length = 495

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 145/337 (43%), Gaps = 32/337 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SISS 73
             + +Y+  PFC  KC YC F ++    K G+ ++F+     E+  +      +   I++
Sbjct: 166 EEVSIYIGIPFCPTKCAYCTFPAYAINGKQGKVDSFLGGLHHEIDAIGAWLKEKGIKITT 225

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVN 131
           +++GGGTP+ I  + + ++ + +  ++     V E+T+EA  P ++        +K  ++
Sbjct: 226 VYYGGGTPTSITAEEMDMLYEQMYASFPDMEKVREVTVEAGRPDTITPEKLDVLKKWNID 285

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + + ++   
Sbjct: 286 RISINPQSYTQETLKAIGRHHTVEETIDKFHLAREMGMNNINMDLIIGLPGEGVGEFAHT 345

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+       + L+++ L+ ++ +   +        +        + ++    T+ H    
Sbjct: 346 LEETEKLMPESLTVHTLSFKRASEMTQ--NKNRYRVADRYEIGKMMDMATEWTTNHNYVP 403

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVAI 295
           Y            E   ++  G +S++N+         IG+G GA S+            
Sbjct: 404 YYLYRQKNILGNLENVGYALPGQDSIYNIMIMEEKQTIIGLGCGASSKFVHPETGKITRF 463

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
           +  K P+S+             + +   + +  E L 
Sbjct: 464 ANPKDPKSYND---------GFEHYTDEKIRILEELF 491


>gi|239826166|ref|YP_002948790.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
 gi|239806459|gb|ACS23524.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. WCH70]
          Length = 501

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/312 (23%), Positives = 142/312 (45%), Gaps = 23/312 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++ +   +   + F+     EM+ + +    R  +I+
Sbjct: 174 AHEVSIYIGIPFCPTKCAYCTFPAYAIGGRQGSVDAFLAGLHYEMREVGRFLKERGINIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + +++  V    EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSITAEEMDRLYAEMYQSFPNVERVREITVEAGRPDTITPEKLNVLKKWNI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP +   ++  
Sbjct: 294 DRISINPQSYIQETLKAIGRHHTVDETIEKFHLAREMGMNNINMDLIIGLPGEGTKEFSY 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L+ ++ +   K        +   +   ++    Q  T  HG  
Sbjct: 354 TLAQTEKLMPESLTVHTLSFKRASEMTK--NKAKYKVADRDEISEMMKAAQEWTKRHGYV 411

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 412 PYYLYRQKNILGNLENVGYALPGKESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRKITR 471

Query: 295 ISIEKHPESWLK 306
            +  K P+ + +
Sbjct: 472 FANPKEPKVYNE 483


>gi|311114773|ref|YP_003985994.1| putative coproporphyrinogen dehydrogenase [Gardnerella vaginalis
           ATCC 14019]
 gi|310946267|gb|ADP38971.1| possible coproporphyrinogen dehydrogenase [Gardnerella vaginalis
           ATCC 14019]
          Length = 238

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 8/221 (3%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY---KVGQENFIQSFLT 57
           ++  +    +     S    VYVH PFC+++C YCDFN++  R       +E +    + 
Sbjct: 3   LELDAELNKSAMQTKSMPFEVYVHVPFCLRRCGYCDFNTYTARDLGEGASREGYADVAIL 62

Query: 58  EMQWMRQLTGPRSI-----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           EM+ +++      I      S+FFGGGTP++++ Q++  IL  I   W +    EIT EA
Sbjct: 63  EMRLVKKWQEFHGIFEPKAQSVFFGGGTPTVLKAQDLVRILQEIRNLWGIMPGAEITTEA 122

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           NP + + +  +   + G  RIS G+QS     L+ L R H        +  A     R S
Sbjct: 123 NPDTADESYIETLAEGGFTRISFGMQSAVPHVLKTLDRTHTPENVERGVKTADACGLRSS 182

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            DLIY  P +++  W   ++ ALS  V+H+S Y LT+E  T
Sbjct: 183 VDLIYGAPGESLDDWRKSVEMALSLGVNHVSAYALTVEPRT 223


>gi|126700356|ref|YP_001089253.1| coproporphyrinogen III oxidase [Clostridium difficile 630]
 gi|115251793|emb|CAJ69628.1| Coproporphyrinogen III oxidase [Clostridium difficile]
          Length = 519

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 140/316 (44%), Gaps = 20/316 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
             N + +YV  PFC  +C YC F S+ ++++   +  ++   + E++   ++     + +
Sbjct: 190 DKNKISLYVSIPFCPTRCVYCSFPSNSLKQFGHLKREYVYKLIEEIKGFAKVIKETKKEV 249

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTP+ ++ + + L+++ +     +S   E T+EA  P ++     +  +K  V
Sbjct: 250 ETLYIGGGTPTTLDEEELDLLINSLFNELDLSKIKEFTVEAGRPDTITEQKLRVLKKHNV 309

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++ + +L  +GR H  S+ +   ++A R  F  ++ D+I  L  + +   + 
Sbjct: 310 SRISINPQTMNDDTLVKIGREHRVSDLVDCFNMARRMGFDNINMDIILGLIDEDLNMVKN 369

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     + + L+++ L I++ +            L      V + +L+       GL+
Sbjct: 370 TLEEIKKLSPESLTVHTLAIKRASNLNINMDRYKEHLTQYEEMVKMIDLSMKYAKDMGLN 429

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +   G E ++N+           +G GA S+           
Sbjct: 430 PYYMYRQKHMLGNLENIGYVKEGYECIYNIQIMEEKQSNYALGAGAISKFVYVDEDRIER 489

Query: 295 ISIEKHPESWLKMVRK 310
           +   K+ E +++ V +
Sbjct: 490 VENVKNVEQYIERVDE 505


>gi|229828399|ref|ZP_04454468.1| hypothetical protein GCWU000342_00460 [Shuttleworthia satelles DSM
           14600]
 gi|229792993|gb|EEP29107.1| hypothetical protein GCWU000342_00460 [Shuttleworthia satelles DSM
           14600]
          Length = 633

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 22/317 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMR---QLTGPR 69
            G     +Y++ PFC   C YC F S+  ++Y     +++ +   E+ ++R   Q    R
Sbjct: 306 DGRKGYSLYLNIPFCPSTCLYCSFTSYPEKKYAALMPDYVSALEREIDYVREDFQEEKKR 365

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
            + SI+ GGGTP+ +  + +  +L  I      S   E TIEA  P S+        R  
Sbjct: 366 VLDSIYIGGGTPTSLPAELLDRLLTCIESRLDTSQLKEWTIEAGRPDSITEARLDAIRGH 425

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQW 187
           GV RIS+  Q++++ +LR +GR+H + +   A  LAR   F  ++ DLI  LP ++    
Sbjct: 426 GVTRISINPQTMKDGTLRLIGRHHTSEQIRTAYSLARSKGFDDINMDLIIGLPGESRADV 485

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  LQ   +   ++L+++ L +++        ++    +   +  +    L  S     G
Sbjct: 486 ERTLQEIAAMGPENLTIHSLALKRTARLNLRWEEYAKYVMESSDEL--MALAASYAKKMG 543

Query: 248 LHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHS-RVKVGSHRV 293
           L  Y            E   ++  G E ++N+       D + +G  A S ++       
Sbjct: 544 LSPYYLYRQKNIAGNQENVGYAKEGYEGIYNIAIMEEQQDIVALGCAADSKKILANGKTD 603

Query: 294 AISIEKHPESWLKMVRK 310
                K+ E ++  V +
Sbjct: 604 RCENVKNVEEYIARVDQ 620


>gi|197335677|ref|YP_002156027.1| coproporphyrinogen III oxidase [Vibrio fischeri MJ11]
 gi|197317167|gb|ACH66614.1| coproporphyrinogen III oxidase [Vibrio fischeri MJ11]
          Length = 458

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/379 (21%), Positives = 146/379 (38%), Gaps = 15/379 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           T Q S    +YVH PFC  +C YC+F  H    ++ QE +  + L E++W  Q    +  
Sbjct: 58  TTQISKHRCLYVHIPFCRVRCTYCNFFQHASSKQLVQE-YFDALLVELKWKAQFAWTQAA 116

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ +    I  +   I   + ++ + EIT+E   +  +   F    + G
Sbjct: 117 PFHAVYIGGGTPTDLTADQIEQLGKAIRSQFPLTPDCEITLEGRINRFDEEMFDKSLEGG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   +  R   R  +    +  I  L+ +    +  DL+Y LP QT   W+
Sbjct: 177 FNRFSFGVQSFNTKVRRSAKRLDDKEYVLRRIQELSDSEQAPIVVDLLYGLPYQTSEIWQ 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHG 247
            +L   L      + LYQL    GT    M   G L  P S      +Y       + H 
Sbjct: 237 QDLNDFLETNAHGVDLYQLIEMGGTPMKGMIDKGKLPQPASTEEKAYMYKYGVEFMNKHH 296

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           L+   +++ +    E S++N       + + +              V I   +  +++++
Sbjct: 297 LNRLSVNHWARSNRERSIYNSLAKTTAEVLPV----GCGAGGNLGGVGIMQHRTLDAYIQ 352

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQ 363
            +      +      +S       ++     R  +S K        ++        +  Q
Sbjct: 353 SINAQQMPIAMMTQSASSAGLF-SMIKAGFDRGVLSRKALMQQTSEDVYQYLMPLFKQWQ 411

Query: 364 RQGFIERVQFSRLRCTQRG 382
             G + +V    L  T  G
Sbjct: 412 NNGLV-KVNADYLSLTLAG 429


>gi|237745920|ref|ZP_04576400.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
 gi|229377271|gb|EEO27362.1| coproporphyrinogen III oxidase [Oxalobacter formigenes HOxBLS]
          Length = 450

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 34/408 (8%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM---QWM-RQ 64
                +    L +YVH PFC   C +C F  +  +    +E +    L E+    ++ R+
Sbjct: 51  QAFMARPERPLALYVHVPFCHHHCTFCPFYINQTKKNFSKE-YSSLLLKEIVDTAYVLRE 109

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +   R +++I+FGGGTPS ++  ++A ++  +   + +S + E+T+E   +       + 
Sbjct: 110 VVDKRPVNAIYFGGGTPSDLDQDDMAAVIRALHDCFRISPDAEVTVEGRTTGFTAGKGKA 169

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           + +AG NR SLGVQS      + LGR  +  E   A++        +  DL+Y LP Q +
Sbjct: 170 WVEAGANRFSLGVQSANTVLRKKLGRISSREEVGEALNGLCESGASVVIDLMYGLPGQDI 229

Query: 185 TQWEMELQRA-LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSI 242
                +++       +  L LY+L     +   K    G +  +P  N    ++      
Sbjct: 230 PMLLDDIRYISEETGIAGLDLYELRCFPDSPLDKAISRGKMPAMPEFNEKARMFGAAYER 289

Query: 243 TSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
              +G   +   +      E SL+N    R  D I  G  A  R+      + +   +  
Sbjct: 290 LYDYGFEHFSPKHWRRNARERSLYNRLAGRQTDMIPFGSAAGGRLGT----IGLGTARDI 345

Query: 302 ESWLKMVRKNGHAVVEKE--FLSSE--------QQADEFLMMGLRLREGISVKDWEMLAG 351
            ++ +MV +    +       L+++          A E L +    +  +S +D    +G
Sbjct: 346 GTYAEMVSRGEKPLSRITPSPLAADRGGFAHELDVAMERLQLPAMDKWPVSHRD----SG 401

Query: 352 RNLDIECERNLQRQGFI-ERVQFSRLRCTQRGMTMLDS---VIANLAV 395
           R L        +  G + +    + +  T  G   +D    ++ +   
Sbjct: 402 RRL----LAQWKEAGLLVDSGAGNGMSLTGAGFFWVDRLKKLLTDFVA 445


>gi|237796512|ref|YP_002864064.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
 gi|229262736|gb|ACQ53769.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 476

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRGLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYSVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGMKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMNENRIERAPNVKDVIEYTKRVEE 462


>gi|291561448|emb|CBL40247.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [butyrate-producing bacterium SS3/4]
          Length = 485

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 140/311 (45%), Gaps = 16/311 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                +YV  PFC   C YC F S+ +  ++     + ++   E+ ++ +    R++ ++
Sbjct: 162 ETGYSLYVGIPFCPTTCLYCSFTSYPIGAWERKVHLYHEALFKELDYVAEKMKGRTLDTV 221

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           +FGGGTP+ ++ + +  +L  I   + +S   E T+EA  P S+  + F+  R   ++RI
Sbjct: 222 YFGGGTPTSLKAEELDALLTKIENTFDLSKVQEFTVEAGRPDSITEDKFKVLRAHNISRI 281

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++ +L  +GR+H          +AR+  F  ++ DLI  LP++ +      ++
Sbjct: 282 SINPQTMKQATLDLIGRHHTVDMVKEKFRMARDLGFDNINMDLIIGLPEEDIDDVRSTME 341

Query: 193 RALSYAVDHLSLYQLTIEKG---TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +    A D ++++ L I++     +F + + +  +    E + +      +     + L+
Sbjct: 342 QVRELAPDSVTVHSLAIKRAARLNIFKERYANLKIQNTQEMIDLTAKYARKMGLEPYYLY 401

Query: 250 A-------YEISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV--AISIEK 299
                   +E   ++  G   ++N+        I   G G  ++V   +          K
Sbjct: 402 RQKNMAGNFENVGYAAPGKACIYNILIMEEKQTIVACGAGTTTKVTFPAENRLERAENVK 461

Query: 300 HPESWLKMVRK 310
              S+++ + +
Sbjct: 462 DVASYIERIDE 472


>gi|90410563|ref|ZP_01218579.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
 gi|90328804|gb|EAS45088.1| coproporphyrinogen III oxidase [Photobacterium profundum 3TCK]
          Length = 475

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/301 (21%), Positives = 129/301 (42%), Gaps = 10/301 (3%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +YVH PFC  +C YC+F  +     +  +++  + + E++       T      +++ GG
Sbjct: 74  LYVHIPFCRVRCTYCNFFQYASSQSL-IDDYFAALMVELELKAGQAWTQAAPFHAVYIGG 132

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +    I  +   I +++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 133 GTPTDLTAAQIKRLGQMIRQHFPLTTDCELTLEGRINRFTDEMFDSALEGGFNRFSFGVQ 192

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  I    +     +  DL+Y LP Q +T W+ +L+  L  
Sbjct: 193 SFDTQVRRKAKRLDDKDVVLERIQALSSSESAPIVIDLLYGLPYQDLTVWQQDLKDFLDS 252

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL    GT    + ++G L  P        ++    +  + H +    +++ 
Sbjct: 253 GAHGVDLYQLIEMGGTPMKGLVENGRLPEPADTPTKATMFENGVNFMAKHHMRRLSVNHW 312

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E S++N       + + +G GA   V            ++ ++++  V K    +
Sbjct: 313 ARDNRERSVYNSLAKTSAEVLPLGAGAGGNVSG----YGFMQHRNLDTYMASVSKGEMPL 368

Query: 316 V 316
           +
Sbjct: 369 M 369


>gi|266625955|ref|ZP_06118890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
 gi|288862145|gb|EFC94443.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
          Length = 291

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 19/275 (6%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +  +    L E++          I +IF GGGTPS+++  +I  I+  + +++ ++ + E
Sbjct: 3   RREYTDKLLEEIRIQSSFVREYQIDTIFLGGGTPSILDAADITAIMGALKEHYDIAPDAE 62

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RN 166
           +TIE NP +V++     YR+AG+NR+S+G+QS ++  LR+LGR H   E + +       
Sbjct: 63  VTIEVNPGTVKMEGLAAYREAGINRVSMGLQSADDTELRYLGRIHTYDEFLKSFQRVRMA 122

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY---------- 216
            F  ++ DLI A+P QT   W   L++      +H+S Y L +E+GT +Y          
Sbjct: 123 GFTNVNVDLISAIPGQTPESWRNTLKKTAMLKPEHISAYSLIVEEGTPYYDRYGGHVEME 182

Query: 217 --------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
                   +        LP E+   ++Y +T++     G   YEISN++  G E  HN+ 
Sbjct: 183 GYEMSPEERRILMALPDLPDEDTEREMYYMTRNCLGEQGYERYEISNYARPGFECRHNVG 242

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           YW    Y+G+G GA S ++          + +  +
Sbjct: 243 YWTGTGYLGLGLGASSYLEGCRFHNTSDFQSYVSA 277


>gi|251778880|ref|ZP_04821800.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083195|gb|EES49085.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 473

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 140/329 (42%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E     +  + + +Y+   FC  KC YC F S+ +   K   E ++ + + E++ +
Sbjct: 132 VAKSEEKFVNKKQDKISIYIGMAFCPTKCLYCSFTSNSIVGNKKMVEPYLDALIKEIKGI 191

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +    ++  I   +    NV E T+E   P ++ 
Sbjct: 192 SSYVKEKNLEIETVYFGGGTPTSVNDEQFKSVMTEIYNGFIKEKNVKEFTVECGRPDTIT 251

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           ++  Q  +   V RIS+  Q++ +++L  +GR H   +      +AR + F  ++ D+I 
Sbjct: 252 LDKLQTMKAYDVTRISINPQTMNDETLNLIGRKHTVDDIKEKFKMARELEFDDINMDIII 311

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP +   +        +    D ++++ L +++G++ Y        L +P +   + +Y
Sbjct: 312 GLPGEGHEELIKTRDELIKLNPDSITVHGLCLKRGSIMYENFILKKGLDIPRQEEIIKMY 371

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAH 283
             ++++     +  Y            E   ++  G E ++N+         I +G  A 
Sbjct: 372 EESRNLAKHLNISPYYMYRQKNMIGNMENVGYAKKGKECIYNIEMIEEKQTVIALGADAV 431

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++           +  K    ++  V +
Sbjct: 432 SKIIFLDEDRIERFANLKDIREYVNRVDE 460


>gi|326387126|ref|ZP_08208736.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208307|gb|EGD59114.1| coproporphyrinogen III oxidase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 443

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/381 (20%), Positives = 145/381 (38%), Gaps = 26/381 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSI 74
           S  + +Y+H P+C   C YC  N+           ++ +   E++ +  + GP+  ++ I
Sbjct: 49  SGDVSLYLHIPYCKDICWYCGCNTGAANRTHRLAAYLDALHEEIELVAGMLGPQVRVTRI 108

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            FGGG+P+ I P +   ++D +  N+ V   V  +IE +P S+        R  GV + S
Sbjct: 109 AFGGGSPNAISPTDFVRLVDALLVNFRVIDPV-FSIELDPRSLTPAWLMAIRGIGVIKAS 167

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           +GVQ+ + +    +GR          +  L +     ++FDL+Y LP Q        L +
Sbjct: 168 MGVQTFDPRVQEAIGRIQPRETIAQGVEGLRKAGVESINFDLMYGLPFQDDAILADTLDQ 227

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A +   D ++L+        L  +  +     LP +     +     +     G      
Sbjct: 228 ATAMGADRIALFGYAHVPH-LLPRQQRIDASQLPDQRQRFRMAAEGYTRLVNAGYQPVGF 286

Query: 254 SNHSFLG---AESL----HNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHP 301
            + +  G   A++        N+  + D      IG+G  + S +     +     EK+ 
Sbjct: 287 DHFALPGDGLAQAAVSGSLRRNFQGFTDDTAPVLIGLGASSISELGGSLVQN----EKNA 342

Query: 302 ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN 361
             +  +V     +       + E +    L+  L  +    V     LA    D      
Sbjct: 343 GRYRMLVGAGQLSGRRGLIRTGEDRRRARLIEALLCQGEAQVD--ADLARAAFD--RLEP 398

Query: 362 LQRQGFIERVQFSRLRCTQRG 382
            + +G I R    RL   +RG
Sbjct: 399 FRERGLI-RWDGDRLVL-ERG 417


>gi|168181746|ref|ZP_02616410.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|182675211|gb|EDT87172.1| radical SAM domain protein [Clostridium botulinum Bf]
          Length = 476

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDMI 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    R   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHRGLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYSVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGMKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMNENRIERAPNVKDVIEYTKRVEE 462


>gi|188588125|ref|YP_001920363.1| coproporphyrinogen III oxidase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498406|gb|ACD51542.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 473

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/329 (19%), Positives = 140/329 (42%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E     +  + + +Y+   FC  KC YC F S+ +   K   E ++ + + E++ +
Sbjct: 132 VAKSEEKFVNKKQDKISIYIGMAFCPTKCLYCSFTSNSIVGNKKMVEPYLDALIKEIKGI 191

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  Q    ++  I   +    NV E T+E   P ++ 
Sbjct: 192 SSYVKEKNLEIETVYFGGGTPTSVNDQQFKSVMTQIYNGFIKEKNVKEFTVECGRPDTIT 251

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           ++  Q  +   V RIS+  Q++ +++L  +GR H   +      +AR + F  ++ D+I 
Sbjct: 252 LDKLQTMKAYDVTRISINPQTMNDETLNLIGRKHTVDDIKEKFKMARELEFDDINMDIII 311

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP +   +        +    D ++++ L +++G++ Y        L +P +   + +Y
Sbjct: 312 GLPGEGHEELIKTRDELIKLNPDSITVHGLCLKRGSIMYENFILKKGLDIPRQEEIIKMY 371

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAH 283
             ++++     +  Y            E   ++  G E ++N+         I +G  A 
Sbjct: 372 EESRNLAKHLNISPYYMYRQKNMIGNMENVGYAKKGKECIYNIEMIEEKQTVIALGADAV 431

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++           +  K    ++  V +
Sbjct: 432 SKIIFLDKDRIERFANLKDVREYVNRVDE 460


>gi|169825978|ref|YP_001696136.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41]
 gi|168990466|gb|ACA38006.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Lysinibacillus
           sphaericus C3-41]
          Length = 501

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/329 (22%), Positives = 145/329 (44%), Gaps = 29/329 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           + VY+  PFC  KC YC F ++     R +     F+     E++ M +        I+S
Sbjct: 174 ISVYIGIPFCPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKNNNMKITS 233

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGVN 131
           I++GGGTP+ IE   +  +   + +++     + EIT+EA  P ++     +  +K G++
Sbjct: 234 IYWGGGTPTSIEADEMDALYQTMYESFPNPETIREITVEAGRPDTITPEKLEVLKKWGID 293

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L+ +GR+H   E I    LAR      ++ DLI  LP + + +++  
Sbjct: 294 RISVNPQSYTDETLKAIGRHHTVQETIDKFWLARESGMNNINMDLIIGLPNEGIEEFQHS 353

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  +     + L+++ L+ ++ +   +        +   +   ++  + Q  T  +    
Sbjct: 354 LVESAKMQPESLTVHTLSFKRASEMTR--NKDKYKVADRDTVAEMMQMAQDWTKENDYVP 411

Query: 251 Y------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAI 295
           Y            E   +S  G ES++N+         +G+G GA S+            
Sbjct: 412 YYLYRQKNILGNLENVGYSKAGEESIYNIVIMEEVQTILGVGCGASSKFVHPETGKITQF 471

Query: 296 SIEKHPESWLKMVRKNGHAVVEK-EFLSS 323
              K P +++    +   A+ +K EFL  
Sbjct: 472 HNPKDPAAYIMTFEE---AIGKKIEFLDE 497


>gi|242037141|ref|XP_002465965.1| hypothetical protein SORBIDRAFT_01g049090 [Sorghum bicolor]
 gi|241919819|gb|EER92963.1| hypothetical protein SORBIDRAFT_01g049090 [Sorghum bicolor]
          Length = 429

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 82/412 (19%), Positives = 153/412 (37%), Gaps = 91/412 (22%)

Query: 22  YVHWPFCVKKCPYCDFNSHV-------------RRYKVGQENFIQSFLTEMQWMRQL-TG 67
           YVH PFC K+C YCDF                         +++Q  L E+   R +   
Sbjct: 59  YVHLPFCRKRCHYCDFPIVALGSSSAPSPGGGEAAEDPRIVDYVQLLLREVSATRPVSDD 118

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + ++FFGGGTPSL+ P+ +A ILD +   + +S+  E++IE +P + +    +    
Sbjct: 119 GVPLETVFFGGGTPSLVPPRLVATILDALRARFGLSACPEVSIEMDPGTFDAARLRELVG 178

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
            GVNR+SL                                  +++  + +          
Sbjct: 179 VGVNRVSL------------------------------VCGLKVNLLIQFGPNH------ 202

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              + R  + +  +   Y+ T+         +  G   LPS+  + + Y +     S  G
Sbjct: 203 ---VLRVSASSPPY--TYKFTV------CAEYSPGVFPLPSDTESANFYKIASKRLSEAG 251

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
            + YEIS++   G E  HNL YW+   +   G G+ S +  G         K    W++ 
Sbjct: 252 YNHYEISSYCKPGYECKHNLTYWQNRPFYAFGLGSASYIN-GIRYSRPRRTKEYAEWVQK 310

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQR 364
           + ++G    E      +  A + +M+ LR   G+ ++ +    G++L +      +    
Sbjct: 311 L-EDGTWCHESRSSDMKDMALDVVMLSLRTAWGLDLQSFSKSFGKSLALSLCNTFKPFVE 369

Query: 365 QGFIERVQFSR------------------------LRCT-QRGMTMLDSVIA 391
            G +  +   R                        +R +   G  + + +I+
Sbjct: 370 SGLVIAMDMDRRALPHIDFELDLQNEDDFGSRVAFIRLSDPDGFLLSNELIS 421


>gi|222151807|ref|YP_002560965.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
 gi|222120934|dbj|BAH18269.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
          Length = 489

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 22/323 (6%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPR--SISSIF 75
           + +Y+  PFC  KC YC F ++  + +K     F+   L E++ + +        ++SI+
Sbjct: 162 VSIYIGIPFCPTKCAYCTFPAYAIQVHKNDVPEFLVGLLYEIEHIGEWLKAHDIKVTSIY 221

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
           FGGGTP+ I  Q++ L+L+ +  ++ ++   E+T+EA  P +++    +      +NRIS
Sbjct: 222 FGGGTPTSISAQDLKLLLEAVYTHFDMTHVRELTVEAGRPDTIDEATLEVLNSFDINRIS 281

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           +  QS  +++L+ +GR+H+  E I    L+R      ++ DLI  LP +T  +    L  
Sbjct: 282 INPQSFTDETLKAIGRHHSVQETIDKFKLSREYHMNNINMDLIIGLPNETRKEVIHSLNE 341

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
                 + L+++ L+ +  +   +        + + +  + + NLT++    H    Y  
Sbjct: 342 TKKLNPESLTVHTLSFKTASEMTR--NKSKYPVAARDEIIYMMNLTKTFAEQHDYIPYYL 399

Query: 252 ----------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAISIE 298
                     E   +S  G  SL+N+         IGIG GA S++              
Sbjct: 400 YRQKNILGNLENIGYSKAGEASLYNILIMEEVQTIIGIGCGASSKLIHPETGKIENYLNP 459

Query: 299 KHPESWLKMVRKNGHAVVEKEFL 321
           K P+S+ K  +   H  ++K  L
Sbjct: 460 KDPKSYNKTYKDYTHQKIDKLNL 482


>gi|209695230|ref|YP_002263159.1| coproporphyrinogen III oxidase [Aliivibrio salmonicida LFI1238]
 gi|208009182|emb|CAQ79435.1| putative coproporphyrinogen oxidase PhuW [Aliivibrio salmonicida
           LFI1238]
          Length = 440

 Score =  200 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 82/385 (21%), Positives = 152/385 (39%), Gaps = 19/385 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H PFC  +C YC+F  H    K   E++  + + E++W  Q    +     +++ GG
Sbjct: 53  LYIHIPFCRVRCTYCNFFQHASS-KSLVESYFDALMIEIKWKAQQAWTQAAPFHAVYVGG 111

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q I L+   +   + ++++ EIT+E   +  +   F+   + G NR S GVQ
Sbjct: 112 GTPTDLSAQQIELLGKAVRTYFPLTTDCEITLEGRINRFDEEMFERSLEGGFNRFSFGVQ 171

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  L+ +    +  DL+Y LP QT   W+ +L   L  
Sbjct: 172 SFNTQVRRSAKRLDDKEYVLRRIQELSNSNQAPIVLDLLYGLPFQTSDIWQQDLNDFLET 231

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL    GT    M + G L  P S      +Y       S H L+   +++ 
Sbjct: 232 GAHGVDLYQLIEMGGTPMKGMIEQGKLPQPASTEEKAYMYKYGVEFMSKHHLNRLSVNHW 291

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E S++N       + + I              + +   +   +++  +++N   +
Sbjct: 292 ASNNRERSIYNSLAKTTAEVLPI----GCGAGGNVGGIGMMQHRTLNAYIDAIQQNTLPI 347

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQ 372
                 S     +  ++        +S         ++     +    + +  G +  V+
Sbjct: 348 AMMTRSSENSALN-AMIKAGFDHGVLSRHTLLQYNNKDVFGFLMPLFMHWENNGLV-IVE 405

Query: 373 FSRLRCTQRGMT----MLDSVIANL 393
              L  T  G      +  SVI  L
Sbjct: 406 NDYLSLTLAGQFWSVTLAQSVITAL 430


>gi|302533083|ref|ZP_07285425.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
 gi|302441978|gb|EFL13794.1| coproporphyrinogen III oxidase [Streptomyces sp. C]
          Length = 460

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 145/393 (36%), Gaps = 23/393 (5%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSIS 72
           ++L +Y H PFC  +C +C+  +     +     F+ +   + +  R+       P   +
Sbjct: 52  DALSLYAHIPFCEMRCGFCNLFTRTGAPEEVTGAFLATLERQARVTREALEAKGEPIRFT 111

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVN 131
              FGGGTP+ +    +  + D               ++E +P++   +      + G  
Sbjct: 112 LAAFGGGTPTYLTADELTRLCDISENIMGADLKAASWSVETSPATATADRIAVLAERGAT 171

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQS  ++  R   R    +E  A++   +   FP ++ DLIY +  QT   + + 
Sbjct: 172 RLSIGVQSFVDEEARAAVRPQKRAEVEASLARLKEARFPILNIDLIYGIDGQTERTFRVS 231

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  AL++  + + LY L +   T     H     +    +  + LY   +    + G   
Sbjct: 232 LDAALAWEPEEIYLYPLYVRPLTGLSTRHA--KTLQDWNDQRLRLYRYGRDHLLSAGYEQ 289

Query: 251 YEISNHSFLGAESLHNL------NYWRYGDYIGIGPGAHSRVKVGSH-----RVAISIEK 299
             +      G  ++ +        Y +    +G+G GA S      +          + +
Sbjct: 290 TSMRVFRRAGTAAVEDTDGSSISEYNQQAGMVGLGVGARSFTTDLHYTTDYAVAVPEVRR 349

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             + ++    +          +   ++   +++  L    G+    +E       + +  
Sbjct: 350 IIDDYIATPTERFRRAQWAFRMDEGERRRMYVLQHLLESTGMRTDAYEQRFATRFEDDFA 409

Query: 360 RN---LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
                L ++ ++ R     L  T  GM   D++
Sbjct: 410 PQLDFLLKRNWL-RESGGTLGLTPDGMAWADAI 441


>gi|320162443|ref|YP_004175668.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerolinea thermophila UNI-1]
 gi|319996297|dbj|BAJ65068.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerolinea thermophila UNI-1]
          Length = 433

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 81/393 (20%), Positives = 154/393 (39%), Gaps = 32/393 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             Q   +  +Y H PFC   CPYC FN  +   +  ++ +  S   EM+ + +     + 
Sbjct: 31  APQNGKAYMLYAHVPFCESLCPYCSFNRFLFDERKARQ-YFSSLREEMRMVAK--RGYTF 87

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+++    +  I+D     + V    E++ E NP+ ++           V 
Sbjct: 88  DTLYIGGGTPTIL-MDELVQIIDLARDLFGV---REVSCETNPNHLD-ERLIDLLAPRVQ 142

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S+GVQS ++  LR + R     +  E +  +      F   + DLI+  P Q +   +
Sbjct: 143 RLSVGVQSFDDDLLRRINRYDRFGSGKEILERVQRTAPAFNAFNIDLIFNFPGQDLASID 202

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L+ AL      ++ Y L         +   +  +     +   ++Y       S+   
Sbjct: 203 RDLRLALESGATQITAYPLMTSPS---VRRALEKTVGTVEFSREAEMYEHIVETLSSVF- 258

Query: 249 HAYEIS---NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
              E+S     S  G  SL +    +  +Y+G+G G+ S +         S     +S+ 
Sbjct: 259 ---ELSTAWTFSRKGK-SLIDEYIVKSEEYVGVGSGSFSYLNGTLLVNTFS----LQSYQ 310

Query: 306 KMVRKNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIECERNL-- 362
           + V +    +  K   S   Q    F+M    LR  +  + WE   G+ ++      L  
Sbjct: 311 RWVSERHAPIAGKRRFSRLDQMRYRFMMDLFGLR--LDKRQWERDFGKPIEHCLPLELLA 368

Query: 363 -QRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            ++ G         +  T RG  +L  ++    
Sbjct: 369 FEKAGAFAENNAEAITLTPRGRYLLVVLMREFF 401


>gi|295401086|ref|ZP_06811060.1| Coproporphyrinogen dehydrogenase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976879|gb|EFG52483.1| Coproporphyrinogen dehydrogenase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 501

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 32/338 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R  +I+
Sbjct: 174 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMREIGRFLKERGINIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + +    +    EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSISAEEMDQLYAVMYEAFPNIERVREITVEAGRPDTITPEKLNVLKKWNI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
            RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ D+I  LP + + ++  
Sbjct: 294 GRISINPQSYIQETLKAIGRHHTVDETIEKFHLAREMGMNNINMDVIIGLPGEGIKEFSH 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L+ ++ +   K        +       ++    Q  T  HG  
Sbjct: 354 TLAQTEKLMPESLTVHTLSFKRASEMTK--NKAKYKVADRGEISEMMKAAQDWTKRHGYV 411

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 412 PYYLYRQKNILGNLENVGYALPGKESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRTITR 471

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
            +  K P+++         A   +E L    +  E L 
Sbjct: 472 FANPKEPKAY-----NENFARYTEEKL----KMMEALF 500


>gi|312112138|ref|YP_003990454.1| coproporphyrinogen dehydrogenase [Geobacillus sp. Y4.1MC1]
 gi|311217239|gb|ADP75843.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y4.1MC1]
          Length = 501

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/338 (22%), Positives = 146/338 (43%), Gaps = 32/338 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           ++ + +Y+  PFC  KC YC F ++    + G  + F+     EM+ + +    R  +I+
Sbjct: 174 AHEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDAFLAGLHYEMREIGRFLKERGINIT 233

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + +    +    EIT+EA  P ++        +K  +
Sbjct: 234 TIYYGGGTPTSISAEEMDQLYAVMYEAFPNIERVREITVEAGRPDTITPEKLNVLKKWNI 293

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
            RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ D+I  LP + + ++  
Sbjct: 294 GRISINPQSYIQETLKAIGRHHTVDETIEKFHLAREMGMNNINMDVIIGLPGEGIKEFSH 353

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L+ ++ +   K        +       ++    Q  T  HG  
Sbjct: 354 TLAQTEKLMPESLTVHTLSFKRASEMTK--NKAKYKVAGRGEISEMMKAAQDWTKRHGYV 411

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      R    
Sbjct: 412 PYYLYRQKNILGNLENVGYALPGKESIYNIMIMEEQQSIIGLGCGASSKFVDPKTRTITR 471

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
            +  K P+++         A   +E L    +  E L 
Sbjct: 472 FANPKEPKAY-----NENFARYTEEKL----KMMEALF 500


>gi|227825158|ref|ZP_03989990.1| coproporphyrinogen III oxidase [Acidaminococcus sp. D21]
 gi|226905657|gb|EEH91575.1| coproporphyrinogen III oxidase [Acidaminococcus sp. D21]
          Length = 468

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 80/366 (21%), Positives = 150/366 (40%), Gaps = 11/366 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F  +       ++ ++   L E+     +       I S+F GGG
Sbjct: 75  YLHIPFCKTKCLYCGFFQN-GTDMSVEDRYVDHLLMELAQDADKPRLQSAPIQSVFIGGG 133

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ + P NI  +L  I K   ++++ E+T+E     +       + + GVNRISLGVQS
Sbjct: 134 TPTSLSPSNIRRLLRAIRKTLPLANDYELTLEGRVHDLVEEKMDVWMEEGVNRISLGVQS 193

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +  + +GR     E +  +          +  DL+Y LP QT+  W+ +L   +   
Sbjct: 194 FDTKVRQQVGRIDTGEEVMKRLQKLSAYNQCAVIIDLMYGLPDQTLDVWQEDLHHLVESG 253

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHGLHAYEISNHS 257
           VD   LYQL + + +  +K  ++G L   +   +  +++ + +   +  G       + +
Sbjct: 254 VDGADLYQLDVFENSDLHKRIEEGRLSPAATTLMQTEMFRIGRRYMAQWGCKRISHCHWA 313

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E SL+N            G GA   V      V+  + +    +  MV +     +
Sbjct: 314 KNNRERSLYNTLARSGTHLFPFGCGAGGHVDG----VSTMLHRVLGPYEGMVARGVKPFM 369

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
               +S     +  +  G   +  +++     L  R + +    +L  +  +      + 
Sbjct: 370 FLSEVSPFAAYEARV-QGEMNQCHLNLDALMALDPRLVSLSHLGDLWEEYGLWHFNGIQY 428

Query: 377 RCTQRG 382
             T+ G
Sbjct: 429 DLTEAG 434


>gi|226950485|ref|YP_002805576.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|226842297|gb|ACO84963.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
          Length = 476

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 71/329 (21%), Positives = 150/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDQNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    +   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHKSLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     +LA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYSVDRISINPQTMNNSTLKNIGRTHSVEDIERIYYLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   ++      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRKIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNKMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+++    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEALAKDLGMKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|187934173|ref|YP_001885233.1| coproporphyrinogen III oxidase [Clostridium botulinum B str. Eklund
           17B]
 gi|187722326|gb|ACD23547.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum B str. Eklund 17B]
          Length = 473

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 142/329 (43%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E     +  + + +Y+   FC  KC YC F S+ +   K   E ++++ + E++ +
Sbjct: 132 VAKSEEKFVNKKQDKISIYIGMAFCPTKCLYCSFTSNSIVGNKKMVEPYLKALIKEIKGI 191

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +    ++  I   +    N+ E T+E   P ++ 
Sbjct: 192 SSYVKEKNLEIETVYFGGGTPTSVNNEEFKAVMTEIYNGFVKEKNIKEFTVECGRPDTIT 251

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
           ++  Q  ++  V RIS+  Q++ +++L+ +GRNH   +      +AR   F  ++ D+I 
Sbjct: 252 LDKLQTMKEYDVTRISINPQTMNDETLKLIGRNHTVDDIKEKFKMARELGFDDINMDIII 311

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP +   +        +    D ++++ L +++G+  Y        L +P +   + +Y
Sbjct: 312 GLPGEGHEELIKTRDELIKLNPDSITVHGLCLKRGSRMYENFILKKGLDIPKQEEIIKMY 371

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAH 283
             ++++     +  Y            E   ++  G E ++N+         I +G  A 
Sbjct: 372 EESRNLAKHLDISPYYMYRQKNMIGNMENVGYAKKGKECVYNIEMIEEKQTVIALGADAV 431

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++           +  K    ++  V +
Sbjct: 432 SKIIFLDEDRIERFANLKDIREYVSRVDE 460


>gi|167758798|ref|ZP_02430925.1| hypothetical protein CLOSCI_01140 [Clostridium scindens ATCC 35704]
 gi|167663538|gb|EDS07668.1| hypothetical protein CLOSCI_01140 [Clostridium scindens ATCC 35704]
          Length = 468

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/324 (20%), Positives = 142/324 (43%), Gaps = 30/324 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +YV  PFC   C YC F+S     ++   E+++ +   E++++ Q +  + +++I
Sbjct: 135 DNGYSLYVGIPFCPTVCSYCSFSSGALADWESRVEDYLDALCKELKFIAQKSSLKKLNTI 194

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +L  I +N++    +E T+EA  P S+     +  R+ GV RI
Sbjct: 195 YIGGGTPTTLTAGQLERLLCCIDENFSREHLLEYTVEAGRPDSITREKLEAIRRHGVTRI 254

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+++++L  +GR H+  + I A  +AR   F  ++ D+I  LP + +   E  L+
Sbjct: 255 SINPQSMQQKTLDAIGRRHSVEQIITAYGMARELGFDNINMDIIAGLPGEDLHDMEDTLR 314

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      D L+++ L I++      M         +  V   +    + +    GL  Y 
Sbjct: 315 QIGRLMPDSLTVHSLAIKRAARM-DMEDLKREDGKTNEVMSGMIRSAERLARQMGLAPYY 373

Query: 252 -----------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGS--------- 290
                      E   ++ +    ++N+         +  G GA +++ +           
Sbjct: 374 LYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIVAAGAGASTKIVLKGIIPMPGSRK 433

Query: 291 ----HRVAISIEKHPESWLKMVRK 310
                 + I   K  ++++  + +
Sbjct: 434 KKMTRLMRIENVKAIDAYIDRIDE 457


>gi|304407551|ref|ZP_07389203.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
 gi|304343502|gb|EFM09344.1| Coproporphyrinogen dehydrogenase [Paenibacillus curdlanolyticus
           YK9]
          Length = 517

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 21/322 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISS 73
           + + +Y+  PFC  KC YC F ++ +   +     F+     EM+ + +        I++
Sbjct: 175 DEVSIYIGIPFCPTKCAYCTFPAYDINGRQGSVNGFLTGLHEEMREIGEWLKRNDVKITT 234

Query: 74  IFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           I++GGGTP+ I  + +  +   + +    V    EIT+EA  P ++        +K GV+
Sbjct: 235 IYYGGGTPTSITAEEMDAMYSLMYEVFPNVDDVREITVEAGRPDTITPEKLAVMQKWGVD 294

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEME 190
           RIS+  QS  +++L  +GR+H   E I    LAR      ++ DLI  LP + + ++E  
Sbjct: 295 RISINPQSYIQETLEVIGRHHTVEETIRKFELARECGMDNINMDLIIGLPNEGLPEFEHT 354

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L    +   + L+++ L+ ++ +   +   D    +        +       T  +G   
Sbjct: 355 LSETANLMPESLTVHTLSFKRASEMTRHRGDQKFKVADREEITAMMRRAVEWTDEYGYIP 414

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV--KVGSHRVAI 295
           Y            E   ++  G ESL+N+         +G+G GA S+           +
Sbjct: 415 YYLYRQKNILGNLENVGYALAGMESLYNILIIEEMQSIVGLGCGASSKFVDPATGEITRL 474

Query: 296 SIEKHPESWLKMVRKNGHAVVE 317
           +  K P+++    ++   A +E
Sbjct: 475 ANPKEPKAYNDTYKQYTDAKIE 496


>gi|293376702|ref|ZP_06622925.1| radical SAM domain protein [Turicibacter sanguinis PC909]
 gi|325845184|ref|ZP_08168492.1| coproporphyrinogen dehydrogenase HemZ [Turicibacter sp. HGF1]
 gi|292644659|gb|EFF62746.1| radical SAM domain protein [Turicibacter sanguinis PC909]
 gi|325488780|gb|EGC91181.1| coproporphyrinogen dehydrogenase HemZ [Turicibacter sp. HGF1]
          Length = 492

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 70/325 (21%), Positives = 141/325 (43%), Gaps = 26/325 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPR--SIS 72
            N + +Y+  PFC  +C YC F ++ +  +K   E F+++ L E++ +      R   I+
Sbjct: 163 QNEISLYIGIPFCPTRCAYCTFPAYAQEPFKKWIEPFLEALLEEIKLVGAFIKERQLKIT 222

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           SI+FGGGT + +  +    +L  + ++    S   EIT+EA  P ++        ++  +
Sbjct: 223 SIYFGGGTATSLTKEQFEKLLITVYEHVANASEVREITVEAGRPDTITPEKLSLLKEYDI 282

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  + +L  +GR+H   + I    +A+   F  ++ DLI  LP +   +   
Sbjct: 283 HRISINPQSFNQATLDSIGRHHTVEDVIDKFKMAKEYDFDNINMDLIVGLPDEGEKELAY 342

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L  ++ +   +          S+     +  +T          
Sbjct: 343 TLSQIEELQPESLTVHMLAFKRSSKITQNRGLY--TTASKEELERMSRMTYDFAKEQQYL 400

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAIS 296
            Y            E   +S  G ES++N+       + +G+G GA S+  +G+      
Sbjct: 401 PYYLYRQKNISANMENIGYSKEGHESIYNILIMEEAQNILGLGVGASSKYLIGTSVH--- 457

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFL 321
             K  ++++   +   +A  + E L
Sbjct: 458 NPKDLKTYIDSYQT--YATKKIETL 480


>gi|331000042|ref|ZP_08323737.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|329572926|gb|EGG54546.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 489

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 83/385 (21%), Positives = 145/385 (37%), Gaps = 42/385 (10%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGGG 79
           YVH PFC  +C +C F  +    +   + +  + + E +    R       I +++FGGG
Sbjct: 75  YVHIPFCESRCLFCMFYQNPYASEAA-DAYTNTLIKEFELWNQRAAQNSAPIKALYFGGG 133

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +EP NI  ILD +  N  ++ + EIT E     +         + GVNR+S+GVQ+
Sbjct: 134 TPTALEPYNIKKILDAVRTNLPLAEDCEITFEGRLHGLTDEKLSACVEGGVNRLSIGVQT 193

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
                 + + R  +    I  +     I    +  DL++  P Q    W  +L+ A    
Sbjct: 194 FNADIRKEMQRLDSPEYIIRRLEKISAIDNLAVVIDLLFGFPGQKGKVWTDDLKIASELP 253

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +D +  YQL + + +      K    D        A       +  +S    H    ++ 
Sbjct: 254 IDGVDCYQLNVFEKSPLNTRIKSGLFDPAATLAEAADMYAESVEHFSSHPNWHRLTNTHW 313

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E +L+N       D +  G GA  ++       +   E+   +W +MV K    V
Sbjct: 314 ARTPLERNLYNRLAKGPSDCLPFGCGAGGKL----FGYSWMQERKLANWSEMVEKGLKPV 369

Query: 316 VEKEFLSSEQQADEFLMMG-------LR-LREGISVKDWEMLA-GRNLDIECERNL---- 362
                         F+MM        +R L   +    + +   G N  ++ E+ L    
Sbjct: 370 --------------FVMMKPQEHWHLMRTLASSVESGPFNLKEIGDNFSVDIEKPLKPVM 415

Query: 363 ---QRQGFIERVQFSRLRCTQRGMT 384
               + G +E+        T  G  
Sbjct: 416 DQWIKAGLLEK-SGDIYSPTVAGQF 439


>gi|306842080|ref|ZP_07474752.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
 gi|306287830|gb|EFM59253.1| oxygen-independent coproporphyrinogen III oxidase [Brucella sp.
           BO2]
          Length = 374

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 76/363 (20%), Positives = 134/363 (36%), Gaps = 20/363 (5%)

Query: 45  KVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
           +   ENF+ + L E++ +   LT    ++ + +GGGTPS++       +L  I   +   
Sbjct: 3   EDVIENFVNALLGEIRMVSASLTARPRVAHLHWGGGTPSILNAGQFQAVLAAIRTAFDFD 62

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
             +E  IE +P +V     +   + GVNR SLGVQ ++ +    +GR         A  L
Sbjct: 63  PLMEHAIELDPRTVTPLLVKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRL 122

Query: 164 ARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            R +    ++FDLIY LP QT+       +R ++ + D ++ Y                 
Sbjct: 123 LREVGINRINFDLIYGLPLQTVETLRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLID 181

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY--- 272
           +  LP  +       +        G     I + +           E   N N+  Y   
Sbjct: 182 ENTLPDADERFRQARIVADSFIGFGYQPVGIDHFALPDDDLAIAAREGTLNRNFQGYTND 241

Query: 273 --GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
             G  IG GP + S+   G  +    +      + K V     A V    L    +    
Sbjct: 242 RCGTLIGFGPSSISQFPGGYAQNISDV----GQYRKRVEAGELATVRGYTLRDTDRIRSA 297

Query: 331 LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++  L     + +         + +    R L   G +  V+   +R T+ G +++  V 
Sbjct: 298 IISALMCNFCVDLNAVAPGMEFSDEFALLRPLVADGLVA-VEGRTIRATENGKSLIRLVA 356

Query: 391 ANL 393
           A  
Sbjct: 357 AAF 359


>gi|292670503|ref|ZP_06603929.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292647913|gb|EFF65885.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 551

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 88/401 (21%), Positives = 160/401 (39%), Gaps = 22/401 (5%)

Query: 7   YENNMTGQGS--NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +E +M       +   VY+H PFC KKC YC F  +  R +    +++   L E+     
Sbjct: 58  WEEHMAAAPDPADERAVYIHIPFCDKKCSYCGFFQNFTREEAAH-HYVDVLLEELDAAAD 116

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                     ++FFGGGTP+ +   ++  ++  + +   ++S+ EIT+E     +  +  
Sbjct: 117 TPYVMGAPFQAVFFGGGTPTALSEADLVRLVRAVRERLPLTSDCEITLEGRIHDLSESKV 176

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPK 181
           +    AGVNR SLGVQS + +  + +GR  +    IA +  +       +  DLIY LP 
Sbjct: 177 EAAMHAGVNRFSLGVQSFDTRVRQSIGRIDDRETVIATLRRMVERQGAVVIADLIYGLPY 236

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQ 240
           Q+M  WE +++      +    LYQL +   +   +  + GDL  LP+     + +    
Sbjct: 237 QSMEVWENDVRTQFEIGIAGGDLYQLNVFPASELARRIESGDLPILPTTEEQSEYFRRGV 296

Query: 241 SITSAHGL-HAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
            I + + +    +I++ +    E S++N    R  D +       S        V     
Sbjct: 297 EIIAENPMARRIDITHWATDHRERSIYNTLAKRGNDVLA----FGSGGGGFVGDVMWRNH 352

Query: 299 KHPESWLKMVRKNGHAVVE-KEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRN--- 353
               ++ KMV +         E   + +   E   +G ++  G      +E   G +   
Sbjct: 353 GALAAYEKMVEEGAKPFQFMGEQADAHRMHSE---IGDQIEHGYFYAPYFEKKYGVDLLS 409

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
                    +  G + R      R T  G    D++I +  
Sbjct: 410 SLAPLLAAWEENGLVMRTATG-FRSTLAGEFWHDNLIQSFL 449


>gi|325679300|ref|ZP_08158885.1| coproporphyrinogen dehydrogenase HemZ [Ruminococcus albus 8]
 gi|324108897|gb|EGC03128.1| coproporphyrinogen dehydrogenase HemZ [Ruminococcus albus 8]
          Length = 492

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 29/345 (8%)

Query: 6   AYENNMTGQ------GSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTE 58
           A+   MT +         S  +YV  PFC  +C YC F S      +     +I     E
Sbjct: 150 AFATAMTQKQILDALDKKSFSLYVSIPFCPTRCSYCSFISQTLDSGRKLIPEYIDKMCRE 209

Query: 59  MQWMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
           ++    +T      + +++FGGGTP+ IE + +  ++  I   + +S   E T+EA  P 
Sbjct: 210 IRHTALITKRLGLKLETVYFGGGTPTSIEAEQLGALMKCIEHCFDMSGVKEYTVEAGRPD 269

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFD 174
           ++     +  ++ G  RIS+  QSL    L  +GR+H+  +   +  LAR I    ++ D
Sbjct: 270 TITEAKLRTIKENGCTRISINPQSLNPAVLEAIGRSHSVEQFYNSFELARKIGFSCINTD 329

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-------KMHKDGDLVLP 227
           +I  LP  T+  ++  + + +  + ++ +++ L+I++  +         K   D  +   
Sbjct: 330 VIAGLPNDTVESFDDTIDKLIELSPENYTVHTLSIKRAAVLNHGDKTVLKNPTDDMVEHA 389

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV 286
           +  +    Y         + +   E    S  G ESL+N+         I IG GA +++
Sbjct: 390 TNRLFESGYLPYYLYRQKNMVGNLENIGWSKRGFESLYNIYIMEEVQTIIAIGAGASTKL 449

Query: 287 KVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
                R+  +   K P  + K              LS +   +EF
Sbjct: 450 VDHPDRLERVFNYKFPLEYNKHFDL---------MLSRKDVIEEF 485


>gi|303256260|ref|ZP_07342276.1| radical SAM domain protein [Burkholderiales bacterium 1_1_47]
 gi|330998955|ref|ZP_08322680.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
 gi|302860989|gb|EFL84064.1| radical SAM domain protein [Burkholderiales bacterium 1_1_47]
 gi|329575697|gb|EGG57223.1| radical SAM domain protein [Parasutterella excrementihominis YIT
           11859]
          Length = 448

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 153/373 (41%), Gaps = 27/373 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +E F+     EM+ +R +      +S++ GGGT
Sbjct: 67  LYAHIPFCKTLCSYCTFHRFLFKEHKAREYFVN-LRKEMEAVRAM--GYDFTSMYVGGGT 123

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++  + +A  L+   K     S  E+++E +P  +         +  V+R+S+GVQS 
Sbjct: 124 TTVLMDE-LAKTLELAKKL--FPSIKEVSVETDPQIMGDPQI-HMLEGLVDRMSIGVQSF 179

Query: 141 EEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+   R+      E    I  A+ +FP  + D+I+    QT      +L+  L  +
Sbjct: 180 DDGILKMTERDKFGTGQEVFENIAKAQELFPICNVDMIFGFRGQTDEILHRDLETLLKLS 239

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              ++ Y L +   T         D +    ++    Y +   + +       ++S  +F
Sbjct: 240 PRQITTYPLMVTSQT----KRSVKDSIAAPHDIMAGQYRMILDMLTEDYT---QLSAWAF 292

Query: 259 LGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             + +     Y     +Y+G+G GA S +    +    S+ +    + + +    + V  
Sbjct: 293 GKSNNEGFDEYVIDNDEYLGVGSGAFSFLGDSLYVNTFSLRR----YNERIGSGNNGVER 348

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERV--Q 372
           ++           L++ L     IS K ++ + G +LD    +    L+  G I+     
Sbjct: 349 RKVFGKRSILQYRLLLQL-FAGRISRKYFKEVHGVDLDRALFKEVLALKLAGAIKENPED 407

Query: 373 FSRLRCTQRGMTM 385
             R   T +G  +
Sbjct: 408 HDRFIVTDKGKLL 420


>gi|296282511|ref|ZP_06860509.1| coproporphyrinogen III oxidase [Citromicrobium bathyomarinum JL354]
          Length = 437

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 140/391 (35%), Gaps = 32/391 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + +Y+H PFC + C YC  N+     +   E+++++   E++ +   L     +  I FG
Sbjct: 44  VSLYLHIPFCEQICFYCGCNTGKANKRKRLESYLRALHREIETVAALLPRGTRVRRIAFG 103

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P+ I P     ++D +   + +   V  +IE +P ++     Q     GV R SLGV
Sbjct: 104 GGSPNAIAPVEFLRLIDALTIQFEIDDPV-FSIELDPRTMSREWAQVLAAVGVERASLGV 162

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E   + +GR       +  +   R      ++FDL+Y LP QT+   E  + R   
Sbjct: 163 QTFAEHCQQAIGRVQPEELIVQTVDWLREAGVSSINFDLMYGLPGQTLDDLEDSMHRTRV 222

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D ++L+        +  +        LP  +    + +        HG       + 
Sbjct: 223 LGADRVALFGYAHVPH-IVARQRVIDATNLPDRDQRFAMASAGFGYFLTHGYVPVGFDHF 281

Query: 257 SFLGAESLH--------NLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           +  G++ L           N+  + D      IG+G  A S       +     EK+   
Sbjct: 282 AKAGSDPLAAAATSGRVRRNFQGFTDDPSDVLIGLGASAISSFPGLLAQN----EKNSGR 337

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL- 362
           +          V      S++ +    ++  L               G  L  E    L 
Sbjct: 338 YRMKAGDGQLTVTRGIHRSADDRYRGAIIERLLCDG-------RSRVGSRLLAEVTPRLT 390

Query: 363 --QRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
               +G    +    L     G+    ++ A
Sbjct: 391 PFIDRGL-AHIDREWLSIEPDGLPYARTIAA 420


>gi|239943853|ref|ZP_04695790.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|239990309|ref|ZP_04710973.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           11379]
 gi|291447316|ref|ZP_06586706.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
 gi|291350263|gb|EFE77167.1| coproporphyrinogen III oxidase [Streptomyces roseosporus NRRL
           15998]
          Length = 477

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 78/395 (19%), Positives = 151/395 (38%), Gaps = 30/395 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           +  ++       L +Y+H PFC  KC +C+  + +       + ++ +  T+++   ++ 
Sbjct: 43  WAEDLQRHPVPELNLYLHVPFCRYKCGFCNLYTVISEDMDVYDAYMDALCTQIRDHTEII 102

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSV--EVNNF 122
             R + +I+ GGGTPSL+  ++   +   + + +    S+  E+ IEA P S+  E    
Sbjct: 103 QSRRLRTIYIGGGTPSLLSLRHFEQLFATLNEVYPNWRSTVEEVAIEATPDSIVKEPGTL 162

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI-AAIHL-ARNIFPRMSFDLIYALP 180
           +G    G+ R ++G+QSL    +R  GR     + I  AI +      P +S DLI    
Sbjct: 163 EGLIALGLTRANIGIQSLVPSEIREAGRGQAGEDVIRRAIEITREKQLPNLSTDLIMGFA 222

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   W   +    + A + +S Y LT+     F K      ++ P        Y+   
Sbjct: 223 GQTPESWRHSVDELTALAPETISTYFLTVRPDAWFSKTGAYQYMMSPDLYER---YDYAN 279

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWR------YGDYIGIGPGAHSRVKVGSHR-- 292
           +   A G        +  LG        Y +          +G+G GA S      +   
Sbjct: 280 ATFRAAGYIQESNVRYKKLGRG-----GYQQKVLTFHGVPLLGLGAGARSYTSSVDYMVG 334

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
                      ++   R +    +    L+ E+   + L++       + + +     G 
Sbjct: 335 NVKPSLTEVADYITKARNHELTPLTGFVLNDEEIIRKRLVLD---SFDLDLNEL-NRFGY 390

Query: 353 ----NLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
               +L        +  G + R+  +R++ T  G 
Sbjct: 391 QEMAHLFEPVLEAAEEVGLLRRLPTNRIQLTPAGF 425


>gi|313894896|ref|ZP_07828456.1| coproporphyrinogen dehydrogenase HemZ [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312976577|gb|EFR42032.1| coproporphyrinogen dehydrogenase HemZ [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 502

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 77/338 (22%), Positives = 150/338 (44%), Gaps = 22/338 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--P 68
           +    + ++ VYV  PFC+ +C YC F +++   +     F++    ++           
Sbjct: 165 LAQTDARTVSVYVGIPFCITRCLYCSFPANILPGEEKLRGFMRVLARDIAAAAADVAALG 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
            ++ +I+ GGGTP+ +     A +L+ +   +  SS VE T+EA  P S+        +K
Sbjct: 225 LTVQNIYVGGGTPTSLPNDFFAEMLEMVYNAFYGSSIVEFTVEAGRPDSMSAEKISCMKK 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
             V R+S+  QS++E++LR +GR H   E +  +H  R  +   ++ D+I  LP +T   
Sbjct: 285 HCVTRVSVNPQSMQERTLRRIGRRHTPEEVVRMLHDLRAAYEVHINMDVILGLPGETAED 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               + +  + A D ++L+ L I++G+   +M ++  + LPS    + +           
Sbjct: 345 VVSTMAQVTALAPDDITLHALAIKRGSQLRRMMEETHVALPSGEETMRMSAAATDAVRRA 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV 293
           G   Y            E   ++  GAES++N+         IGIG  A ++V       
Sbjct: 405 GYRPYYLYRQGYMSGDLENVGYARPGAESMYNVQIMEEQQTIIGIGGAATTKVIGVRGDR 464

Query: 294 AIS--IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
             S    K   ++L+ +      + ++  L  ++  +E
Sbjct: 465 MRSVFNAKDLTTYLRDID---IYIEKRRALLRDEYEEE 499


>gi|59711833|ref|YP_204609.1| coproporphyrinogen III oxidase [Vibrio fischeri ES114]
 gi|59479934|gb|AAW85721.1| coproporphyrinogen oxidase, anaerobic [Vibrio fischeri ES114]
          Length = 458

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 83/379 (21%), Positives = 148/379 (39%), Gaps = 15/379 (3%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           T Q S    +YVH PFC  +C YC+F  H    ++ QE +  + L E++W  QL   +  
Sbjct: 58  TTQLSKHRCLYVHIPFCRVRCTYCNFFQHASSKQLVQE-YFDALLVELKWKAQLAWTQAA 116

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ +    I  +   I   + ++ + EIT+E   +  +   F    + G
Sbjct: 117 PFHAVYIGGGTPTDLTADQIEQLGKAIRSQFPLTPDCEITLEGRINRFDEEMFDKSLEGG 176

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   +  R   R  +    +  I  L+ +    +  DL+Y LP QT   W+
Sbjct: 177 FNRFSFGVQSFNTKVRRSAKRLDDKEYVLRRIQELSDSEQAPIVVDLLYGLPYQTSEIWQ 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHG 247
            +L   L      + LYQL    GT    +   G L  P S      +Y       + H 
Sbjct: 237 QDLNDFLETNAHGVDLYQLIEMGGTPMKGVIDKGKLPQPASTEEKAYMYKYGVEFMNKHH 296

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           L+   +++ +    E S++N       + + +              V I   +  +++++
Sbjct: 297 LNRLSVNHWARSNRERSIYNSLAKTTAEVLPV----GCGAGGNLGGVGIMQHRTLDAYIQ 352

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQ 363
            ++     +      +S       ++     R  +S K        ++        +  Q
Sbjct: 353 SIKAQQMPIAMMTQSASSAGLF-SMIKAGFDRGVLSRKSLLQQTSEDVYQYLMPLFKQWQ 411

Query: 364 RQGFIERVQFSRLRCTQRG 382
             G + +V    L  T  G
Sbjct: 412 NNGLV-KVNADYLSLTLAG 429


>gi|187778363|ref|ZP_02994836.1| hypothetical protein CLOSPO_01955 [Clostridium sporogenes ATCC
           15579]
 gi|187771988|gb|EDU35790.1| hypothetical protein CLOSPO_01955 [Clostridium sporogenes ATCC
           15579]
          Length = 476

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 73/329 (22%), Positives = 149/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E ++  +  N++ VYV  PFC  +C YC F S+ + + K   E ++++   EM  +
Sbjct: 134 IANMEKSIVNKDKNTISVYVGMPFCPTRCLYCSFTSNPIGKCKNLVEPYLKALYYEMDML 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEA-NPSSVE 118
            +    +   I  ++FGGGTP+ +        L+ I  N+  +  VE  T+E   P S+ 
Sbjct: 194 SKYIQHKGLKIQCVYFGGGTPTSVNNAQFEKTLNKIYYNFVHNKEVEEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++   +L+ +GR H+  +     HLA++I F  ++ DLI 
Sbjct: 254 EEKLLSMKKYNVHRISINPQTMNNSTLKNIGRTHSVEDIERIYHLAKSIGFKNINMDLIV 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + +   +R      D+++++ ++I++G++ + K+    +  +P +     +Y
Sbjct: 314 GLPGEGIEEIKNTCRRIKKLNPDNITVHGMSIKRGSILHEKLVNKMEFNIPKQEELNRMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             T+ +    G+  Y            E   +S      ++N+         I +G  A 
Sbjct: 374 EETEVLAKDLGMKPYYMYRQKNMLGNMENVGYSKENKIGIYNIQMIEERQTIIALGADAV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++     +        K    + K V +
Sbjct: 434 SKIIFMDENRIERSPNVKDVIEYTKRVEE 462


>gi|152974529|ref|YP_001374046.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023281|gb|ABS21051.1| Coproporphyrinogen dehydrogenase [Bacillus cytotoxicus NVH 391-98]
          Length = 495

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 138/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ +      +   ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEIREIGAFLKEKGIKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++  V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEQMYESFPNVENVREVTVEAGRPDTITPEKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARKMGMNNINMDLIIGLPGEGLEIFQH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLAETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ESL+N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESLYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITY 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|328911014|gb|AEB62610.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus amyloliquefaciens LL3]
          Length = 522

 Score =  198 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 23/313 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SIS 72
            + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        ++
Sbjct: 191 KDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKQHDIKVT 250

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + + L+ + +      V +  EIT+EA  P ++         K  +
Sbjct: 251 TIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREITVEAGRPDTITEEKLAVLNKYKI 310

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H   E I   HL+R      ++ DLI  LP +   ++  
Sbjct: 311 DRISINPQSYENETLKAIGRHHTVEETIEKYHLSRKHGMNNINMDLIIGLPGEGTAEFRH 370

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +     T  HG  
Sbjct: 371 SLDETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVADRQEVSRMMDDAVRWTKEHGYT 428

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +SF G ES++N+         IGIG GA S+           
Sbjct: 429 PYYLYRQKNILGNLENVGYSFPGQESIYNIMIMEEVQTIIGIGCGAASKFIHPETGKITH 488

Query: 295 ISIEKHPESWLKM 307
            +  K P+S+   
Sbjct: 489 FANPKDPKSYNDR 501


>gi|325290215|ref|YP_004266396.1| Coproporphyrinogen dehydrogenase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965616|gb|ADY56395.1| Coproporphyrinogen dehydrogenase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 518

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/319 (19%), Positives = 142/319 (44%), Gaps = 18/319 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
              T +    + +Y+  PFC  +C YC F  +           ++ + + E++    L  
Sbjct: 182 QPQTKKQQRFVSLYISVPFCPSRCSYCSFAFAESTGQDSTISGYLSALVREIELAGGLLT 241

Query: 68  PRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQG 124
             S  ++ ++ GGGTP++++   + ++L  I     ++ +VE T+EA  P ++       
Sbjct: 242 RTSFLVNHLYIGGGTPTVLDSARLEILLKKIKAEIPLADDVEYTVEAGRPDTMNQEKLLC 301

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
            ++ GVNR+S+  QS+ + +LR +GR H   + +    LAR I    ++ D+I  LP + 
Sbjct: 302 LKRYGVNRLSINPQSMNDGTLRAIGRRHTVQDILDCYALAREIGDWIINMDIILGLPGEG 361

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             + E  ++  LS   D+L+++ +++++ +  ++     +  +  + V   ++   Q   
Sbjct: 362 PEEVEQTVRAVLSLKPDNLAVHAMSLKRRSKQWEAGAAINGGVLWQEVQEGVFRKIQQ-A 420

Query: 244 SAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRV 293
                + Y         E       G E  +N+       + +G+G GA S++       
Sbjct: 421 GYGPYYLYRQKNISGNLENVGFCLPGKEGRYNIAVIEENQNILGLGAGACSKIMAEDFAG 480

Query: 294 AISIEKHPE--SWLKMVRK 310
             +I +  +  ++++   +
Sbjct: 481 HQNIYQPIDVLTYMEGYER 499


>gi|154685441|ref|YP_001420602.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42]
 gi|154351292|gb|ABS73371.1| HemZ [Bacillus amyloliquefaciens FZB42]
          Length = 500

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 138/313 (44%), Gaps = 23/313 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SIS 72
            + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        ++
Sbjct: 169 KDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKRHDIKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + + L+ + +      V++  EIT+EA  P ++         K  +
Sbjct: 229 TIYFGGGTPTSITAEEMDLLYEEMVRSFPDVANIREITVEAGRPDTITEEKLAVLNKYKI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H   E I   HL+R      ++ DLI  LP +   ++  
Sbjct: 289 DRISINPQSYENETLKAIGRHHTVEETIEKYHLSRKHGMNNINMDLIIGLPGEGTAEFRH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+       + L+++ L+ ++ +   +        +        + +     T  HG  
Sbjct: 349 SLEETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVADRQEVSRMMDDAVRWTKEHGYT 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +SF G ES++N+         IGIG GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYSFPGQESIYNIMIMEEVQTIIGIGCGAASKFIHPETGKITH 466

Query: 295 ISIEKHPESWLKM 307
            +  K P+S+   
Sbjct: 467 FANPKDPKSYNDR 479


>gi|254505827|ref|ZP_05117972.1| HutW protein [Vibrio parahaemolyticus 16]
 gi|219551050|gb|EED28030.1| HutW protein [Vibrio parahaemolyticus 16]
          Length = 457

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 153/386 (39%), Gaps = 21/386 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
            G       +Y+H PFC  +C +C+F  +    K+  +++ ++ + E+         ++ 
Sbjct: 55  PGSKHQKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDDYFEALMVEIDQKAAQPWTQTG 113

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ + PQ +  +   I +++ +S++ EIT+E   +      F+   + G
Sbjct: 114 VFHAVYIGGGTPTDLSPQQVERLGKAIQRSFPLSTDCEITLEGRINRFSDEMFERALEGG 173

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S G+QS   Q  R   R  +  + +  +  L+      +  DL+Y LP QT   +E
Sbjct: 174 FNRFSFGIQSFNTQVRRSAKRLDDREDVMERVASLSATQQAPIIVDLLYGLPYQTAEVFE 233

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHG 247
            +L   ++     L LYQL +        +   G +  P+       +Y L       H 
Sbjct: 234 QDLIDFMATGAHGLDLYQLVVGGDAPMINLVDKGKIPAPATTIEKASMYELGSQFMDQHH 293

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           L    +++ +    E S +N     Y + + I                +   +  E+++ 
Sbjct: 294 LRRLSVNHWARDNRERSQYNSLAKTYAEVLPI----GCGAGGNIGGYGMMNHRTLETYMS 349

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLR--LREGISVKD----WEMLAGRNLDIECER 360
            ++     V       ++Q A E L   L+     G+  +D    +   +  +L +    
Sbjct: 350 AMKSGDSTVAMM----TKQHALEPLFSALKSGFDHGVVRRDALPSFIGQSSFDLLLPLFE 405

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTML 386
             Q++G +  V    L  T  G    
Sbjct: 406 IWQQRGLVT-VDEQYLVLTLAGRFWA 430


>gi|297203019|ref|ZP_06920416.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
           29083]
 gi|197712012|gb|EDY56046.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
           29083]
          Length = 484

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/346 (22%), Positives = 156/346 (45%), Gaps = 16/346 (4%)

Query: 14  QGSNSLG--VYVHWPFCVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +GS +    +Y+H PFC +KC +C ++ + VR       +++     E Q   Q      
Sbjct: 56  EGSETFSHNLYIHIPFCRQKCSFCYYSVAVVRDDTTIIWDYLHCLEKEAQSYLQARPGWR 115

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I ++F GGGTPS + P+ IA + + +   + +S   EIT E +P S  ++  +   + GV
Sbjct: 116 IETVFVGGGTPSRLNPEQIAFLFERVIGRFDLSGCREITYECSPDSATLDRIRAMAEHGV 175

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR+S+GVQ+L+ + LR   RN +  E I    H+A +  P ++ DLI  + ++     E 
Sbjct: 176 NRLSMGVQTLDPEILRKSRRNDSPDEVIRTYYHMADSGVPNVNIDLIAGIEREAFGNMER 235

Query: 190 ELQRALSYA--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +    +       ++L+ L++ +G++  +     D        ++ LY   +      G
Sbjct: 236 TMDAVAALDPLPTQITLFTLSVREGSINNRTLLSVDDPARMFRRSLTLYRYAKRRMLDMG 295

Query: 248 LHAYEISNHSFLGAESL--HNLNYWRYGDY-IGIGPGAHSRVKVGSHRVAISIEKHPESW 304
              Y  S + F   + +  +  N+W    Y + +G   +S     ++  A     +   +
Sbjct: 296 YWQY--SRNLFPREDWIFHYQDNHWGNNGYVLALGASGYSHSHSHTYLNAF----NYREY 349

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           ++ +     AV +   L  ++     L++ ++  E + ++ +E   
Sbjct: 350 MRRINSGESAVEKVFPLDEDESLRRHLVLAMKHAE-LDIRAFESHY 394


>gi|196230554|ref|ZP_03129416.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
 gi|196225484|gb|EDY19992.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
          Length = 478

 Score =  198 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 150/403 (37%), Gaps = 43/403 (10%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            +G+Y H PFC   C +C +   +   +     ++ +   E+ W   +     ++ +F G
Sbjct: 62  PIGIYAHIPFCNYACSFCFYAKRIGETRETMARYVDALEKELAW---IPPGTPLTQLFVG 118

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ + P+ +   L  I ++  V   +  T+E +P S+   +     +  + R+S+G+
Sbjct: 119 GGTPTALPPELLDRTLTAIFRHV-VRGPITHTVECSPDSLTDAHIDVLLRHQIGRVSMGI 177

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  ++ L  + R H    A+A      +    ++ DLIY LP QT   +  +LQ   + 
Sbjct: 178 QSTHDEVLDHIRRKHAGEVALATCAKLVSCGLMVNVDLIYGLPGQTEEHFRRDLQLVSAS 237

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY------NLTQSITSAHGLHAY 251
               ++ Y L + + T   +   + + + P   +    +       L    T  H     
Sbjct: 238 GAHSITAYNLRVNERTPVAQKLGEDERLGPHRLIRWRAFVRHTATELGYRQTRGHTFIR- 296

Query: 252 EISNHSFLGAESLHNLNYWRYGDY------IGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
             S  +  G++         + D         +G  + SR+    +R          ++L
Sbjct: 297 --STGTDPGSQRA-----ATFRDLTSHGQQFSVGLSSRSRLNGTIYRNHA----DLAAYL 345

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL--- 362
           + +  +   V E   L +      ++ + L   E +   D+    G + D +    L   
Sbjct: 346 ESIESSRSPVHEIFPLDASGSRLRYIALTLGEGEPLDRADYHRTFGSSFDEDFSEPLRLT 405

Query: 363 QRQGFIERV------------QFSRLRCTQRGMTMLDSVIANL 393
           +  G I                 + L  T  G  + D V+   
Sbjct: 406 RDAGLIADHPSPGTPVTAKSPDTATLSLTSEGKLVYDKVLLAF 448


>gi|308172965|ref|YP_003919670.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605829|emb|CBI42200.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552610|gb|AEB23102.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208]
          Length = 500

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 23/313 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SIS 72
            + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        ++
Sbjct: 169 KDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKQHDIKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + + L+ + +      V +  EIT+EA  P ++         K  +
Sbjct: 229 TIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREITVEAGRPDTITEEKLAVLNKYKI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H   E I   HL+R      ++ DLI  LP +   ++  
Sbjct: 289 DRISINPQSYENETLKAIGRHHTVEETIEKYHLSRKHGMNNINMDLIIGLPGEGTAEFRH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +     T  HG  
Sbjct: 349 SLDETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVADRQEVSRMMDDAVRWTKEHGYT 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +SF G ES++N+         IGIG GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYSFPGQESIYNIMIMEEVQTIIGIGCGAASKFIHPETGKITH 466

Query: 295 ISIEKHPESWLKM 307
            +  K P+S+   
Sbjct: 467 FANPKDPKSYNDR 479


>gi|311067471|ref|YP_003972394.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
 gi|310867988|gb|ADP31463.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
          Length = 500

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/337 (22%), Positives = 145/337 (43%), Gaps = 28/337 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--S 70
           Q  + + +Y+  PFC  KC YC F ++  + + G+  +F+     E+Q + +        
Sbjct: 167 QVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHFEIQKIGEWLKRHEIK 226

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
           +++I+FGGGTP+ I  + + L+ + +      V    EIT+EA  P ++         K 
Sbjct: 227 VTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKQIREITVEAGRPDTITEEKLDVLNKY 286

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQW 187
            ++RIS+  QS E ++L+ +GR+H   E I   HL+R      ++ DLI  LP + + ++
Sbjct: 287 HIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSREHGMSNINMDLIIGLPGEGVEEF 346

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L+       + L+++ L+ ++ +   +        +   +    + +     T  +G
Sbjct: 347 RNSLRETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVADRDEVSQMMDDAVVWTKENG 404

Query: 248 LHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHR 292
              Y            E   +S  G ES++N+         IGIG GA S+         
Sbjct: 405 YEPYYLYRQKNILGNLENVGYSVPGQESIYNIMIMEEVQTIIGIGCGAASKFIDPKTGKI 464

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
              +  K P+S+      +      +E +   +Q  E
Sbjct: 465 THFANPKDPKSY-----NDRFEHYTEEKIKYLEQIFE 496


>gi|212640118|ref|YP_002316638.1| coproporphyrinogen III oxidase [Anoxybacillus flavithermus WK1]
 gi|212561598|gb|ACJ34653.1| Coproporphyrinogen III oxidase hemZ [Anoxybacillus flavithermus
           WK1]
          Length = 499

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 23/315 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPR--SIS 72
           SN + +Y+  PFC  KC YC F ++  + K G  ++F+     EM+ + +    R   I+
Sbjct: 173 SNEVSIYIGIPFCPTKCAYCTFPAYAIQGKQGSVDSFLFGLHYEMEQIGKFLKERNIPIT 232

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + +  +   + +    V    EIT+EA  P ++        +K  +
Sbjct: 233 TIYYGGGTPTSITAEEMDALYAHMYRVFPNVERVREITVEAGRPDTITPEKLAVLKKWNI 292

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++LR +GR+H   E I   HLAR      ++ DLI  LP + + Q++ 
Sbjct: 293 DRISINPQSYIQETLRAIGRHHTVEETIEKFHLARESGMNNINMDLIIGLPGEGVKQFDF 352

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +      + L+++ L+ ++ +   K        +   +   ++    +  T   G  
Sbjct: 353 TLAQTEKLMPESLTVHTLSFKRASEMTK--NKEKYKVADRDEIHEMMKRAERWTKEKGYV 410

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHR--VA 294
            Y            E   ++  G ES++N+         IG+G GA S+      +    
Sbjct: 411 PYYLYRQKNILGNLENVGYALPGQESIYNIMIMEEQQSIIGLGCGASSKFVHPKTKAITH 470

Query: 295 ISIEKHPESWLKMVR 309
            +  K P+++ +   
Sbjct: 471 FANPKEPKAYNENYE 485


>gi|2226152|emb|CAA74441.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 346

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 23/313 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG--PRSIS 72
            + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        ++
Sbjct: 13  KDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKEHDVKVT 72

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + + L+ + +      V +  EIT+EA  P ++         K  +
Sbjct: 73  TIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNKYDI 132

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H   E I   HL  ++    ++ DLI  LP + + ++  
Sbjct: 133 DRISINPQSYENETLKAIGRHHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKEFRH 192

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        +     + T  HG  
Sbjct: 193 SLSETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVAGREEVSQMMEDAVAWTKEHGYV 250

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +S  G ES++N+         IGIG GA S+   +       
Sbjct: 251 PYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASKFIDRDTGKITH 310

Query: 295 ISIEKHPESWLKM 307
            +  K P+S+ + 
Sbjct: 311 FANPKDPKSYNER 323


>gi|303257980|ref|ZP_07343989.1| HutW protein [Burkholderiales bacterium 1_1_47]
 gi|302859323|gb|EFL82405.1| HutW protein [Burkholderiales bacterium 1_1_47]
          Length = 439

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 144/377 (38%), Gaps = 26/377 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRSISSIFFGGG 79
           YVH PFC  +C +C F  +    +   + +  + + E +    R       I +++FGGG
Sbjct: 25  YVHIPFCESRCLFCMFYQNPYASEAA-DAYTNTLIKEFELWNQRATQNSAPIKALYFGGG 83

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +EP NI  ILD +  N  ++ + EIT E     +         + GVNR+S+GVQ+
Sbjct: 84  TPTALEPHNIKKILDAVRTNLPLAEDCEITFEGRLHGLTDEKLSACVEGGVNRLSIGVQT 143

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA 198
                 + + R ++    I  +     I    +  DL++  P Q    W  +L+ A    
Sbjct: 144 FNADIRKEMQRLNSPEYIIRRLEKISAIDNLAVVIDLLFGFPGQKGKVWTDDLKIASELP 203

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +D +  YQL + + +      K    D        A       +  +S    H    ++ 
Sbjct: 204 IDGVDCYQLNVFEKSPLNTRIKSGLFDPAATLAEAADMYAESVEHFSSHPNWHRLTNTHW 263

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E +L+N       D +  G GA  ++       +   E+    W +MV K    V
Sbjct: 264 ARTPLERNLYNRLAKGPSDCLPFGCGAGGKL----FGYSWMQERKLAKWSEMVEKGLKPV 319

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDIECERNL-------QRQGF 367
                +  ++     LM  L     +    + +   G N  ++ E+ L        + G 
Sbjct: 320 F--VMMKPQEHW--HLMRTL--ASSVESGPFNLKEIGDNFSVDIEKPLKPVMDQWIKAGL 373

Query: 368 IERVQFSRLRCTQRGMT 384
           +E+        T  G  
Sbjct: 374 LEK-SGDIYSPTVAGQF 389


>gi|296332403|ref|ZP_06874864.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673684|ref|YP_003865356.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296150321|gb|EFG91209.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305411928|gb|ADM37047.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 501

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 23/315 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG--PRS 70
           Q  + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        
Sbjct: 166 QVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKEHDVK 225

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
           +++I+FGGGTP+ I  + + L+ + +      V +  EIT+EA  P ++         K 
Sbjct: 226 VTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNKY 285

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQW 187
            ++RIS+  QS E ++L+ +GR+H   E I   HL  R+    ++ DLI  LP + + ++
Sbjct: 286 DIDRISINPQSYENETLKAIGRHHTVEETIEKYHLSRRHGMNNINMDLIIGLPGEGVKEF 345

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              L        + L+++ L+ ++ +   +        +        + +   + T  HG
Sbjct: 346 RHSLSETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVAGREEVSQMMDDAVAWTKEHG 403

Query: 248 LHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHR 292
              Y            E   +S  G ES++N+         IGIG GA S+   +     
Sbjct: 404 YAPYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASKFIDRDTGKI 463

Query: 293 VAISIEKHPESWLKM 307
              +  K P+S+ + 
Sbjct: 464 THFANPKDPKSYNER 478


>gi|321314705|ref|YP_004206992.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
 gi|291483457|dbj|BAI84532.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020979|gb|ADV95965.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
          Length = 501

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 23/313 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG--PRSIS 72
            + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        ++
Sbjct: 168 KDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKEHDVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + + L+ + +      V +  EIT+EA  P ++         K  +
Sbjct: 228 TIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNKYDI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H   E I   HL  ++    ++ DLI  LP + + ++  
Sbjct: 288 DRISINPQSYENETLKAIGRHHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKEFRH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        +     + T  HG  
Sbjct: 348 SLSETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVAGREEVSQMMEDAVAWTKEHGYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +S  G ES++N+         IGIG GA S+   +       
Sbjct: 406 PYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASKFIDRDTGKITH 465

Query: 295 ISIEKHPESWLKM 307
            +  K P+S+ + 
Sbjct: 466 FANPKDPKSYNER 478


>gi|16081159|ref|NP_388865.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308821|ref|ZP_03590668.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221313144|ref|ZP_03594949.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221318068|ref|ZP_03599362.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221322343|ref|ZP_03603637.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|59799598|sp|Q796V8|HEMZ_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 2;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|32468726|emb|CAB12823.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 501

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/313 (23%), Positives = 138/313 (44%), Gaps = 23/313 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTG--PRSIS 72
            + + +Y+  PFC  KC YC F ++  + + G+  +F+     EMQ + +        ++
Sbjct: 168 KDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLKEHDVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGI-AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I+FGGGTP+ I  + + L+ + +      V +  EIT+EA  P ++         K  +
Sbjct: 228 TIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREITVEAGRPDTITEEKLAVLNKYDI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS E ++L+ +GR+H   E I   HL  ++    ++ DLI  LP + + ++  
Sbjct: 288 DRISINPQSYENETLKAIGRHHTVEETIEKYHLSRQHGMNNINMDLIIGLPGEGVKEFRH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        +     + T  HG  
Sbjct: 348 SLSETEKLMPESLTVHTLSFKRASEMTR--NKHKYKVAGREEVSQMMEDAVAWTKEHGYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   +S  G ES++N+         IGIG GA S+   +       
Sbjct: 406 PYYLYRQKNILGNLENVGYSLPGQESIYNIMIMEEVQTIIGIGCGAASKFIDRDTGKITH 465

Query: 295 ISIEKHPESWLKM 307
            +  K P+S+ + 
Sbjct: 466 FANPKDPKSYNER 478


>gi|310658606|ref|YP_003936327.1| coproporphyrinogen III oxidase [Clostridium sticklandii DSM 519]
 gi|308825384|emb|CBH21422.1| putative coproporphyrinogen III oxidase [Clostridium sticklandii]
          Length = 471

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 133/328 (40%), Gaps = 27/328 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQ 60
           KYL   E         S  +Y+  PFC  +C YC F S  + + +   + ++ S   E++
Sbjct: 139 KYLDDIE--------KSYSIYISIPFCPSRCNYCSFFSCSLDKEQNLIDPYLDSLEKELK 190

Query: 61  --WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
             +  ++   + + SI+ GGGTPS +       ++  +     + +  E T EA  P ++
Sbjct: 191 FFYSNKVIYDKELLSIYIGGGTPSTLSINQFQRLIKILQTYVPLKNVKEFTFEAGRPDTL 250

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
           +    +  + + V R+S+  Q++ + +L+ +GRNH  S+ I    ++R+I F  ++ DLI
Sbjct: 251 DREKLEAIKMSPVTRLSINPQTMNDVTLKKIGRNHTVSDIIECFKISRDIGFDNINMDLI 310

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK--MHKDGDLVLPSENVAVD 234
             L  +++      L        D L+++ L I+K +            L   +    + 
Sbjct: 311 LGLEDESIENITKTLSHIKELKPDSLTVHTLAIKKASTLINDSQGALDKLRTYNIEDFMK 370

Query: 235 LYNLTQSITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
           +             + Y         E   ++     SL+N+         I  G G+ S
Sbjct: 371 ISADAADYLGMKPYYLYRQKNMLSNLENIGYALEDKISLYNIAIMEEKQTIIAFGSGSVS 430

Query: 285 RVKVG--SHRVAISIEKHPESWLKMVRK 310
           +      +    +S  K  + ++  V +
Sbjct: 431 KFTYPEENRIERVSNIKDVKLYIDNVEQ 458


>gi|292669404|ref|ZP_06602830.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           noxia ATCC 43541]
 gi|292648965|gb|EFF66937.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           noxia ATCC 43541]
          Length = 503

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 138/339 (40%), Gaps = 22/339 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--P 68
           +      ++ +YV  PFC+ +C YC F S++   +     F+     ++    +      
Sbjct: 165 LAQSAERTVSIYVGIPFCLSRCLYCSFPSNLLPGREKLRTFMDVLARDLSVAAEDVRTLG 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
            ++ SI+ GGGTP+ +     A +L  +   +   S  E T+EA  P S+        + 
Sbjct: 225 LTVESIYIGGGTPTSLPNDFFAEMLKMVYNAFYGLSVAEFTVEAGRPDSMSAEKIACMKS 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
             V R+S+  QS+  ++L  +GR+H   + +  +   R  F   ++ D+I  LP +T   
Sbjct: 285 YAVTRVSVNPQSMRGETLVRIGRHHTPEDIVRMVREIRAAFDVHINMDVILGLPGETAED 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +    + A D ++L+ L +++G+      +   + LPS+   + +           
Sbjct: 345 VRATMAAVTALAPDDITLHALALKRGSNLRLRMETEHIELPSDAETMRMSETAVRAVEEA 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRYGDYI-GIGPGAHSRVKVGSHRV 293
           G   Y            E   ++  GAES++N+        I GIG  A ++V       
Sbjct: 405 GYRPYYLYRQGYMSGDLENVGYARPGAESIYNIQIMEERQTIVGIGGAAATKVLGIRTGR 464

Query: 294 AIS--IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
             S    K   ++L+ +      + ++  L   +  +E 
Sbjct: 465 MHSVFNAKDLVTYLRDID---IYIEKRRALLRTEYEEET 500


>gi|269102794|ref|ZP_06155491.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162692|gb|EEZ41188.1| coproporphyrinogen III oxidase, oxygen-independent [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 463

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 151/375 (40%), Gaps = 17/375 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +YVH PFC  +C YC+F  +    ++  +++  + + E++   Q    +     +++ GG
Sbjct: 76  LYVHIPFCRVRCTYCNFFQYASSQQL-IDDYFAALMIELKLKAQQPWTQSAPFHAVYIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  +   I K++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 135 GTPTDLTAQQVKQLGTMIRKHFPLTTDCELTLEGRINRFSDEMFDSALEGGFNRFSFGVQ 194

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  I  LA      +  DL+Y LP QT+  W+ +L+  ++ 
Sbjct: 195 SFDTQVRRKAKRLDDREVVLDRIAALAATDQAPIVIDLLYGLPYQTLDVWQQDLEDFMTS 254

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL    GT    +   G L  P        ++ +     S H +    +++ 
Sbjct: 255 GAHGVDLYQLIEMGGTPMKNLIDKGKLPEPADTQTKATMFLMGHDYMSHHHMRKLSVNHW 314

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N       + + +     +          +   +  +++L  +++    +
Sbjct: 315 ARDNRERSLYNSLAKTTAEVLPL----GAGAGGNIAGFGMMQHRTLDAYLAAIKRGELPI 370

Query: 316 V-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERV 371
               +  +      E  +     R  +S    + + G+ L   C    +  +  G +E V
Sbjct: 371 AMMTKQANQASLHAE--IKASFDRGVLSRSSLDSIGGKGLYSSCLPLFKAWRENGLVE-V 427

Query: 372 QFSRLRCTQRGMTML 386
               +  T  G    
Sbjct: 428 NSHYVTLTLAGQFWA 442


>gi|332653669|ref|ZP_08419413.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Ruminococcaceae bacterium D16]
 gi|332516755|gb|EGJ46360.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase)
           [Ruminococcaceae bacterium D16]
          Length = 502

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 78/328 (23%), Positives = 149/328 (45%), Gaps = 27/328 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS 72
            + + VY+  PFC  +C YC F S  V R       +++  L E+    +      +++ 
Sbjct: 175 DDQVSVYIGVPFCPTRCAYCSFVSADVGRTLKLVGPYLEGVLREIAVTGESLRRAGKTVH 234

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN 131
           S++ GGGTP+ +    ++ +L+ + ++  V   VE T+EA  P +++       R+AG+ 
Sbjct: 235 SLYVGGGTPTTLSASQLSQLLEAVHRDLPVEHCVEYTVEAGRPDTIDREKLMALREAGIG 294

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           RIS+  Q+LE   L+ +GR H+A + + A  LAR   F  ++ DLI  LP+ +   +   
Sbjct: 295 RISINPQTLENPVLQAIGRRHSAQDILDAYALAREVGFDSINMDLIAGLPRDSFEGFCRS 354

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   L+   ++++++ L ++KG+   +        LPS      + + +    S  G   
Sbjct: 355 LNGVLALEPENITVHTLALKKGSRLMEQGG----ALPSGEETARMLDYSLERLSGKGYLP 410

Query: 251 Y------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVAI 295
           Y            E       G ES++N+         + IG G  +++  +     V  
Sbjct: 411 YYLYRQKYMSGSLENVGWCLSGQESVYNIVMMEELQTVVSIGGGGVTKLVDRAAGTIVRQ 470

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSS 323
              K+P  +L  + +    + +KE L++
Sbjct: 471 PNPKYPHDYLAALDR---VLAQKEELAA 495


>gi|312115233|ref|YP_004012829.1| coproporphyrinogen dehydrogenase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220362|gb|ADP71730.1| Coproporphyrinogen dehydrogenase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 451

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/317 (24%), Positives = 132/317 (41%), Gaps = 11/317 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           SA         +    VY++ P+C  +C +C F  +V R ++  + ++   + EM+ M  
Sbjct: 45  SAVARAFATPRAEPAAVYINVPYCQSRCLFCGFFQNVWRPELS-DAYVNDVVAEMEEMAA 103

Query: 64  -QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L     I S++ GGGTPS +    +A ++  + +   +    EIT+E       +   
Sbjct: 104 TPLVSTAPIESVYLGGGTPSALLSAPLARLIANVRRLLPLDPECEITVEGRAYGFGLEKA 163

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPK 181
                AG NR+SLGVQ+ +    R LGR  + +  +A +  LA      +  DL+Y LP 
Sbjct: 164 VAAFDAGANRVSLGVQTFDTAVRRRLGRKLDGAATLAFLNDLAALDRASIVCDLMYGLPG 223

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQ 240
           QT   W  +++   S  +D ++LY L I +G    K   D  L   +       +Y    
Sbjct: 224 QTREIWRRDIETVASSRIDGVTLYALNIFRGGPLAKSIADEKLPPAALVGEQAQMYVEAA 283

Query: 241 SITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
               A G      S+ +    E + +N    R    I  GPGA  +         +SI++
Sbjct: 284 EFLVAEGFRQVSQSHFARGDHERNRYNSGIKRGVPCIPFGPGAGGQAHGVRWSNLVSIDE 343

Query: 300 HPESWLKMVRKNGHAVV 316
                 K  +  G A +
Sbjct: 344 R-----KAAKAEGQAPI 355


>gi|317056337|ref|YP_004104804.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
 gi|315448606|gb|ADU22170.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
          Length = 489

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/348 (22%), Positives = 146/348 (41%), Gaps = 35/348 (10%)

Query: 6   AYENNMTGQ------GSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTE 58
           A+   MT +         S  +YV  PFC  +C YC F S      +     +I     E
Sbjct: 147 AFSTAMTQKQILDALDKKSFSLYVSIPFCPTRCSYCSFISQTLDSGRKLIPEYIDKMCRE 206

Query: 59  MQWMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
           ++    +T      + +++FGGGTP+ IE   +A ++  I  ++ +SS  E T+EA  P 
Sbjct: 207 IRHTALITKRLGLKLDTVYFGGGTPTSIEASQLAALMKCIEHSFDMSSVREYTVEAGRPD 266

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFD 174
           ++     +  +  G  RIS+  QSL    L  +GR+H+  +   +  LAR I    ++ D
Sbjct: 267 TITEEKLRTIKANGCTRISINPQSLNPDVLEAIGRSHSVDQFYDSYDLARKIGFSCINTD 326

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK-----MHKDGDLVLPSE 229
           +I  LP+ T+  +   + + L  + ++ +++ L+I++  L  +     +    D ++   
Sbjct: 327 VIAGLPEDTVESFADTIDKLLGLSPENFTVHTLSIKRAALLNQGDKEVLKNPTDEMVEHA 386

Query: 230 NVAVDLYNLTQSIT--SAHGLHAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV 286
              +              + +   E    S  G ESL+N+         + IG GA +++
Sbjct: 387 TKRLFDSRYLPYYLYRQKNMVGNLENIGWSKQGYESLYNIYIMEEVQTILAIGAGASTKL 446

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVV-EKEF---LSSEQQADEF 330
                        +PE  L+ V      +   K F   LS +   +EF
Sbjct: 447 -----------VDYPER-LERVFNYKFPLEYNKHFDLMLSRKDVIEEF 482


>gi|255658300|ref|ZP_05403709.1| oxygen-independent coproporphyrinogen III oxidase 2 [Mitsuokella
           multacida DSM 20544]
 gi|260849617|gb|EEX69624.1| oxygen-independent coproporphyrinogen III oxidase 2 [Mitsuokella
           multacida DSM 20544]
          Length = 515

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 140/318 (44%), Gaps = 19/318 (5%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           +      ++ VYV  PFC+ +C YC F S++   K     F+     ++   ++      
Sbjct: 180 LAQSDEKTVSVYVGIPFCLTRCLYCSFPSNILPGKKRIAEFMTVLEKDLLAAKKAIDHYG 239

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             + +I+ GGGTP+ +  +  A +L+ +   +   S VE T+EA  P S+     +  ++
Sbjct: 240 FRVQNIYVGGGTPTSLPDEAFAEMLNMVYNAFYGPSIVEFTVEAGRPDSITPAKIEMMKR 299

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQ 186
             V+R+S+  Q+++ ++L  +GR H   + +   H  R    P ++ DLI  LP +T   
Sbjct: 300 LSVSRVSVNPQTMQAKTLHRIGRQHTPEDVVTMFHALREAGIPHINMDLILGLPGETAED 359

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +++  +   D ++L+ L +++G+    + +D  + LPS+     +  +  +     
Sbjct: 360 VRDTMEKVTALGPDDITLHALALKRGSRLRLLMEDQHVELPSDEETRRMSEVAMAYVEKL 419

Query: 247 GLHAYEISNH------------SFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRV 293
           G+  Y +                  GAE ++N+     +   IGIG  A ++      + 
Sbjct: 420 GMRPYYLYRQGYMSGDLENVGCCRAGAEGMYNIQIMEEHQTIIGIGGAATTKGVDFRRKR 479

Query: 294 AIS--IEKHPESWLKMVR 309
             S    K   ++L+ + 
Sbjct: 480 MKSSFNAKDLVTYLRDID 497


>gi|94495976|ref|ZP_01302555.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           SKA58]
 gi|94424668|gb|EAT09690.1| oxygen-independent coproporphyrinogen III oxidase [Sphingomonas sp.
           SKA58]
          Length = 434

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/390 (18%), Positives = 137/390 (35%), Gaps = 28/390 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIF 75
             + +Y+H P+C   C YC  N+           ++ +   E+    Q  G R  I+ I 
Sbjct: 45  TPVSLYLHIPYCHDICWYCGCNTGAANRSHRLAAYVDALEQEIATTAQRLGGRGHITRIA 104

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           FGGG+P+ +   +   +L  + + +  + + +I++E +P  ++          GV R++L
Sbjct: 105 FGGGSPNSLPLVDFVRLLQQVIRCFG-ARDAQISVELDPRRLDRAWIDAMGVMGVGRVNL 163

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+        +GR         A+     I   + FDL+Y LP Q++      L+  +
Sbjct: 164 GVQTFTPAVQARIGRIQPLDMVERAVERFGRIGIAVGFDLMYGLPGQSLDDLAATLEATM 223

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             A   ++L+        L  +  +     LP       +  L  +   A G       +
Sbjct: 224 RMAPARIALFGYAHMPR-LLPRQRRIDASALPDMEARFAMAALGHAQFLAAGYLPIGFDH 282

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +  G              N+  + D      IG+G  A S        + +  EK   +
Sbjct: 283 FALPGDSMAQAARRGGLRRNFQGFTDDDAGVLIGMGASAISAFPD----LLVQNEKAAGA 338

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           +   +             + + QA   ++  L  R        E   G  L +      +
Sbjct: 339 YRDRMATGQAGACRGVIRTPDDQARGRVIESLLCRG-------EAHVG-TLPLPDLSRFE 390

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             G + R Q S +      +    ++ +  
Sbjct: 391 ELGLLHR-QGSHVTLHPTALPYARAIASTF 419


>gi|167771532|ref|ZP_02443585.1| hypothetical protein ANACOL_02902 [Anaerotruncus colihominis DSM
           17241]
 gi|167666172|gb|EDS10302.1| hypothetical protein ANACOL_02902 [Anaerotruncus colihominis DSM
           17241]
          Length = 484

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 25/320 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG-- 67
           ++    +S  +YV  PFC  +C YC F S  V R       ++     E+++   L    
Sbjct: 153 LSRSTPDSFSLYVSVPFCPTRCAYCSFVSQSVERDAALIPAYVDRLCEELEYTGCLAKEL 212

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
              + +++FGGGTP+ +  +++  ++  +A  + +S   E T+EA  P +V     +   
Sbjct: 213 GLRLRTVYFGGGTPTTLSAEDLTRVMGTVADRFDLSGLWEYTVEAGRPDTVTPQKLRAIY 272

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
             G  R+S+  Q+L +  L  +GR H +++   A  +AR   F  ++ DLI  LP  T  
Sbjct: 273 AGGARRVSINPQTLSDTVLCAIGRRHTSAQFFEAFAMARAAGFDCINTDLIAGLPADTPE 332

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +   +   L+   ++++++ LT+++ +         +L L    V        ++   A
Sbjct: 333 GFAASVDGVLALHPENVTVHTLTVKRASRLTFDEARSELELVGGMVG-----YARNACEA 387

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKV--GS 290
            GLH Y            E   ++ +G E L+N          + +G GA ++++     
Sbjct: 388 AGLHPYYLYRQTGTLASLENVGYAAVGTEGLYNTYIMDETHTILAVGAGASTKLRHPKTG 447

Query: 291 HRVAISIEKHPESWLKMVRK 310
               +   KHP  ++    +
Sbjct: 448 RIERVYNYKHPTEYIGRFDE 467


>gi|15895539|ref|NP_348888.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum ATCC
           824]
 gi|15025275|gb|AAK80228.1|AE007728_7 FeS oxidoreductases (HEMK related) YHAV B.subtilis ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|325509687|gb|ADZ21323.1| coproporphyrinogen III oxidase [Clostridium acetobutylicum EA 2018]
          Length = 476

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 71/329 (21%), Positives = 151/329 (45%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWM 62
           +S  E        NS+ +Y+  PFC  +C YC F S  +   K   ++++++ + +++  
Sbjct: 134 VSKNEKKFLKSVDNSVSIYLGMPFCPTRCRYCSFISDTISHCKSYVDDYLKAMMYDIEKT 193

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                 R   I  ++FGGGTP+ +  +    I+  + +++   +NV E T+E   P S+ 
Sbjct: 194 SSYIRQRGLKIGCVYFGGGTPTSVSDEQFETIMKSVYESFIEGNNVKEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
                  +K  V+RIS+  Q++ +++++ +GR H + + I A ++AR I F  ++ D+I 
Sbjct: 254 RKKLLTMKKYKVHRISINPQTMNDETIKSMGRGHTSKDVIDAFNMAREIGFDNINMDIII 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL-FYKMHKDGDLVLPSENVAVDLY 236
            LP + + +        L    + L+++ L++++G+  F  M +D  +  P+++  V+++
Sbjct: 314 GLPGENLDKINNTCIEILKLKPESLTIHGLSLKRGSKLFEDMLEDKRIEAPNQDDIVNMF 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAH 283
               S      +  Y            E   +S  G E ++N+         I IG    
Sbjct: 374 EKAYSCARELNMKPYYMYRQKNMVGNMENVGYSLEGKECIYNIQMIEDSQPIIAIGCHGV 433

Query: 284 SRV--KVGSHRVAISIEKHPESWLKMVRK 310
           S++  K  +        K  + ++  + +
Sbjct: 434 SKILFKETNRIERYPNLKDVKEYINRIEE 462


>gi|297616959|ref|YP_003702118.1| coproporphyrinogen dehydrogenase [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144796|gb|ADI01553.1| Coproporphyrinogen dehydrogenase [Syntrophothermus lipocalidus DSM
           12680]
          Length = 496

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 78/319 (24%), Positives = 152/319 (47%), Gaps = 21/319 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
               S  L VYV  PFC  +C YC F  + V  Y      F+++   E++   Q+T    
Sbjct: 166 NDAASRYLSVYVGIPFCPSRCHYCSFLGATVTDYSRQVTPFMEALGREVEVFGQVTKDLG 225

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             + SI+ GGGTP+++   ++ ++L+ + + +  ++  EIT+EA  P ++     +  R+
Sbjct: 226 FKVQSIYVGGGTPTVLACNDLEVLLEWLNRYFVSAATREITVEAGRPDTLTAEKLRLLRE 285

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQ 186
           AGV RIS+  Q++ + +LR +GR+H+  E + A  LAR+   R ++ DLI  LP + M +
Sbjct: 286 AGVTRISINPQTMNDATLRAIGRSHSVEEVVRAFELARHEGLRQINMDLIVGLPGEGMKE 345

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +     R L    ++++++ L +++G++  +  +        E V   +  + ++  +  
Sbjct: 346 YTNTADRILQLKPENVTVHVLAVKRGSVLAETERGVGAREQIEQVERGI-EMFRNRLTGT 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRV 293
           G   Y            E   +S  G   L+N+         +G+G G  S+        
Sbjct: 405 GYEPYYLYRQRYMAANMENLGYSLPGCYCLYNILMIEERQTILGLGAGTASKFVNPGSWT 464

Query: 294 AISIE--KHPESWLKMVRK 310
             S+   K+P S+++ + +
Sbjct: 465 LTSLYSPKNPLSYVESLSR 483


>gi|330991356|ref|ZP_08315307.1| Oxygen-independent coproporphyrinogen-III oxidase
           [Gluconacetobacter sp. SXCC-1]
 gi|329761375|gb|EGG77868.1| Oxygen-independent coproporphyrinogen-III oxidase
           [Gluconacetobacter sp. SXCC-1]
          Length = 455

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 84/416 (20%), Positives = 154/416 (37%), Gaps = 43/416 (10%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++LSA         S  + +Y+H PFC   C +C  N+ V R    +  +    L E+  
Sbjct: 39  QWLSAL------PASQPVSLYLHVPFCDTLCRFCGCNTAVLRNADARAAYGALLLEELHR 92

Query: 62  MRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  + GP R IS + +GGGTP+ +    +  ++  I +N+ +  + EI+IE +P  +   
Sbjct: 93  IVAIIGPQRRISHLQWGGGTPTTLPTGTMRRVMQAIRQNFIILPDAEISIEVDPRHLPPA 152

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
                 + G NR S+GVQ L+       GR  +  +    +   R      ++ DLIY L
Sbjct: 153 YPALLHELGFNRASMGVQDLDPDVQEACGRIQSWEQTRDCLDALRAAGVNAINIDLIYGL 212

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P+Q         +   S   D L+++           +        LP     V      
Sbjct: 213 PRQDTAGVARTARAVASLRPDRLAVFGYAHVP-WKQKRQALIPTGQLPGPADRVAQRTAI 271

Query: 240 QSITSAHGLHAYEISNHS--------FLGAESLHNLNYWRYGDYIGIGP----------- 280
             +  A G     + +++         +   +LH  N+  Y                   
Sbjct: 272 DGVLRAEGFLPVGLDHYASPTDSMARAMATGTLHR-NFQGYT------VDAAAALIGIGA 324

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A S +  G  + A+S   +    L     +   VV    L ++ +    ++  +     
Sbjct: 325 SAISALPGGMTQNAVSSAAYAR--LMAQDTDSLPVVRGVALDADDRLRATIIEQVMCTLQ 382

Query: 341 ISVKDWEMLAGRN---LDIECER--NLQRQGFIERVQFSRLRCTQRGMTMLDSVIA 391
             + +     G     LD E  R   + R G + +V   ++R T++G   +  V +
Sbjct: 383 ADLAETTTRYGLPADCLDPELGRLAGMARDGLV-QVTGRQIRVTEKGRPFVRHVAS 437


>gi|121535602|ref|ZP_01667409.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305842|gb|EAX46777.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
          Length = 512

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 22/317 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPR--S 70
           Q +  + VY+  P+C  +C YC F +++    +   E F+ +   +++    L       
Sbjct: 178 QAAKLVSVYIGIPYCPSRCLYCSFPAYILPNDRQSVETFLHALARDIEEAALLLEHCRCK 237

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           + +I+ GGGTP+ +  ++ + +L  +   +   +  E T+EA  P SV        R  G
Sbjct: 238 VQTIYIGGGTPTSLADEDFSRLLRLVTAAFWSDATREFTVEAGRPDSVTDAKIAAMRAYG 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           V R+S+  QS++E++L  +GR H+  + I      R    P ++ D+I  LP +      
Sbjct: 298 VTRVSVNPQSMQEKTLNHIGRKHSVRDIIDIFQKFRRAEIPVINMDIIAGLPGEDAGDMA 357

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++   + A D+L+++ L I++G+L        D+ LP EN    + ++ +   +  GL
Sbjct: 358 ATMKEIAALAPDNLTVHTLAIKRGSLL--KANLADIPLPDENETARMLDVARQYVAKMGL 415

Query: 249 HAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR-VKVGSHRVA 294
             Y            E   ++  G E L+N+         IGIGP A ++ V  GS R+A
Sbjct: 416 KPYYLYRQKYMTGNFENVGYARPGTECLYNIQIMEERQTIIGIGPAAGTKAVWPGSWRLA 475

Query: 295 -ISIEKHPESWLKMVRK 310
            +   K   +++  +  
Sbjct: 476 SVYNAKDVTTYIANLDS 492


>gi|229084075|ref|ZP_04216367.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-44]
 gi|228699224|gb|EEL51917.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-44]
          Length = 496

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++  V    E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQSFPDVKEVREVTVEAGRPDTITPEKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARQMGMNNINMDLIIGLPGEGLEIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKNHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|260777295|ref|ZP_05886189.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260606961|gb|EEX33235.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 456

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/381 (20%), Positives = 159/381 (41%), Gaps = 21/381 (5%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-- 70
           GQ +    +Y+H PFC  +C +C+F  +    K+  +++ ++ + E++    L   ++  
Sbjct: 56  GQRNKKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDDYFEALINEIKQKSALPWTQTGV 114

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +++ GGGTP+ +  + +  +   I + + +S++ EIT+E   +      F+   + G 
Sbjct: 115 FHAVYIGGGTPTDLSTEQVERLGKAIRQYFPLSTDCEITLEGRINRFSEEMFERALEGGF 174

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S G+QS + +  R   R  +    +  +  L+      +  DL+Y LP QT+  +E 
Sbjct: 175 NRFSFGIQSFDTKVRRSAKRLDDREVVLERVAQLSATEEAPIILDLLYGLPYQTLDVFEQ 234

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGL 248
           +L   +S     L LYQL +        + + G +  P +      +Y L  +    H +
Sbjct: 235 DLNDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKMPPPATTPDKASMYELGVAFMDKHYM 294

Query: 249 HAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
               +++ +    E S +N     Y + + I                +   +  E+++  
Sbjct: 295 RQLSVNHWARDNRERSQYNSLAKTYAEVLPI----GCGAGGNIGGYGMMNHRTLETYMNA 350

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLR--LREG-ISVKDWEMLAGR---NLDIECERN 361
           ++     V       ++Q A E L   ++    +G +S     +LAG    +  +     
Sbjct: 351 MKSGDSVVAMM----TKQHAQEPLFAAIKSGFDKGVVSRHQLPLLAGEDTFDFFMPLFEV 406

Query: 362 LQRQGFIERVQFSRLRCTQRG 382
            Q +G   R++   L  T  G
Sbjct: 407 WQNKGL-ARIEGDYLALTLAG 426


>gi|196228798|ref|ZP_03127664.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
 gi|196227079|gb|EDY21583.1| Coproporphyrinogen dehydrogenase [Chthoniobacter flavus Ellin428]
          Length = 247

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 13/259 (5%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS ++  L+ LGR H+A++A     L R   F  ++ DL++A+P QT+ QW+  L R +
Sbjct: 1   MQSWDDGLLKTLGRVHDAAQAEKTFGLLREAGFSNINIDLMFAVPGQTLAQWQATLDRTV 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   +H+S Y LT E+ T +++  + G      E  A   +  T    +  G   YEISN
Sbjct: 61  ALRPEHVSSYCLTYEEDTEYFRQLQLGTFRQDDERDAAL-FETTIDTLTGAGFDHYEISN 119

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           ++  G ES HN  YWR  DY+G GP A S V +   +          ++++ V       
Sbjct: 120 YAKPGFESAHNFAYWRGADYLGFGPSAFSTVGLQRWQNVP----DSAAYMQRVFAGESTT 175

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E L+   +  E     +R REGI+              +  R  +  GF+E+ +  R
Sbjct: 176 GFSEELTPAMRTGEIAAFAVRTREGIATDALHR------WSKEMREFRELGFLEQ-RGDR 228

Query: 376 LRCTQRGMTMLDSVIANLA 394
              T+RG  M DSV     
Sbjct: 229 TVLTRRGKLMADSVAEAFV 247


>gi|228989974|ref|ZP_04149949.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           pseudomycoides DSM 12442]
 gi|228769765|gb|EEM18353.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           pseudomycoides DSM 12442]
          Length = 496

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++  V    E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQSFPDVKEVREVTVEAGRPDTITPEKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARQMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKNHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPSQESIYNIVIMEEVQSIIGLGCGASSKFVHPETGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|228996172|ref|ZP_04155822.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock3-17]
 gi|229003776|ref|ZP_04161586.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock1-4]
 gi|228757466|gb|EEM06701.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock1-4]
 gi|228763588|gb|EEM12485.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides Rock3-17]
          Length = 496

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +++  V    E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQSFPDVKEVREVTVEAGRPDTITPEKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLARQMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKNHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPSQESIYNIVIMEEVQSIIGLGCGASSKFVHPETGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|330446166|ref|ZP_08309818.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490357|dbj|GAA04315.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 465

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/379 (20%), Positives = 157/379 (41%), Gaps = 21/379 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFGGG 79
           +YVH PFC  +C YC+F  +    ++  + F    +  ++  +Q  T      +++ GGG
Sbjct: 73  LYVHIPFCRVRCTYCNFFQYASSKQLVDDYFAALMIELVEKAKQPWTQAAPFQAVYIGGG 132

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + I  +   I +++ ++++ E+T+E   +  +   F+   + G NR S GVQS
Sbjct: 133 TPTDLSAKQIEQLGKMIRQHFPLTTDCELTLEGRINRFDDEMFESALEGGFNRFSFGVQS 192

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + Q  R   R  +    ++ +  LA+     +  DL+Y LP Q +T W+ +L    +  
Sbjct: 193 FDTQVRRKAKRLDDREAVLSRVQRLAQYDQAPIVIDLLYGLPYQDLTVWQQDLSDFFATG 252

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAYEISNHS 257
              + LYQL    GT    + + G L  P+       ++    +   AH  +   +++ +
Sbjct: 253 AHGVDLYQLVEMNGTPMADLVEKGRLPQPAGTAIKASMFETGVAAMDAHHFNRLSVNHWA 312

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E SL+N       + + +     +          +   +  + +L  +++    V 
Sbjct: 313 RDNRERSLYNSLAKTTAEVLPL----GAGAGGNIGGYGVMQHRTLDGYLAAIKQGSMPVA 368

Query: 317 --EKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECE---RNLQRQGFI-- 368
              K+ +++       + +      G +S  + E  AG N+   C    +  Q+ GF+  
Sbjct: 369 MMMKQPVNAAT----TMAIKCAFDRGVVSKIELEQQAGWNVFDYCLPLFKAWQQHGFVTL 424

Query: 369 -ERVQFSRLRCTQRGMTML 386
               Q   +  T  G    
Sbjct: 425 NTTEQHQYVTLTLAGQFWA 443


>gi|226940122|ref|YP_002795195.1| ChuW [Laribacter hongkongensis HLHK9]
 gi|226715048|gb|ACO74186.1| ChuW [Laribacter hongkongensis HLHK9]
          Length = 452

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 8/280 (2%)

Query: 3   YLSAYEN-NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +L+A+     T     +L VYVH PFC   C +C F  +     +  E ++   + +++ 
Sbjct: 40  WLAAWNTIASTPLPERAL-VYVHIPFCANHCVFCGFYRNGWNAGLA-EQYVDRLVADIEA 97

Query: 62  -MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              +     SI++++ GGGTP+L+    +  +L  + +   ++ + EIT+E   S  +  
Sbjct: 98  EAARRPAGGSIAAVYLGGGTPTLLPAGQLTRLLQTLRRCLPLAPDCEITVEGRMSHFDAG 157

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYAL 179
                  AG NR S+GVQ+ +    R LGR H   EA A +   AR+    +  DLI+ L
Sbjct: 158 KVDACLAAGANRFSIGVQTFDSAIRRRLGRKHAGDEAAAYLAWLARHSQAVVVTDLIFGL 217

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL-PSENVAVDLYNL 238
           P QT   W+ +L  ALS  +  + +Y   +       +M + G L   P        Y L
Sbjct: 218 PGQTEAVWQRDLDTALSLGLSGIDVYAFNLYPHLPVNRMIEKGALPPAPGLAEVAAQYGL 277

Query: 239 TQSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRYGDYI 276
                +A G      S+    G    + +N         +
Sbjct: 278 AHQAFTAAGWEQLSNSHFGAPGRGERNHYNRAIKSGATCL 317


>gi|331269253|ref|YP_004395745.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
 gi|329125803|gb|AEB75748.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
          Length = 478

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/337 (21%), Positives = 147/337 (43%), Gaps = 23/337 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQ 60
           ++  E +   + S ++ +Y+  PFC   C YC F S+    R      E +++    E+ 
Sbjct: 136 IAKAEKSRVNKESKNVSIYIGMPFCPTTCLYCSFASNPIAGRNTNKMVEPYLEKLKEEIN 195

Query: 61  WMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    +   I  ++FGGGTP+ +  +    I++ + K++  + NV E  IE   P S
Sbjct: 196 IIKEFIEKKDLNIECVYFGGGTPTSVNNEQFESIIEKVYKSFVKNRNVKEFNIECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +        +K  V+RIS+  Q++ E +L+ +GR+H   + I   +LAR I F  ++ D+
Sbjct: 256 INEEKLLTMKKYHVSRISINPQTMNEDTLKLIGRHHTVEDIIEKFNLARKIGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I  LP +T+   E   +  L    D L+++ ++I++G+  Y+      + +  +    ++
Sbjct: 316 IVGLPNETLDNIETTCKEILKLNPDSLTVHGMSIKRGSKLYEEIYIDKVRIMKQQSLNEM 375

Query: 236 YNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGA 282
           Y  T  +     +  Y            E   +   G E L+N+         I +G  A
Sbjct: 376 YMRTTKLAEELNMKPYYMYRQKNMVGHMENVGYCKGGKEGLYNIEMIEDKQTIIALGADA 435

Query: 283 HSRVKV--GSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +++     +        K  + ++    +     +E
Sbjct: 436 VTKLVNLKNNKIERFGNLKDVKEYITRFDEKIKGKIE 472


>gi|260887820|ref|ZP_05899083.1| coproporphyrinogen oxidase, anaerobic [Selenomonas sputigena ATCC
           35185]
 gi|330838611|ref|YP_004413191.1| Coproporphyrinogen dehydrogenase [Selenomonas sputigena ATCC 35185]
 gi|260862426|gb|EEX76926.1| coproporphyrinogen oxidase, anaerobic [Selenomonas sputigena ATCC
           35185]
 gi|329746375|gb|AEB99731.1| Coproporphyrinogen dehydrogenase [Selenomonas sputigena ATCC 35185]
          Length = 508

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/338 (18%), Positives = 142/338 (42%), Gaps = 24/338 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR- 69
           +      ++ VYV  PFC  +C YC F +++         F  ++  ++   ++      
Sbjct: 170 LQTSDERTISVYVGIPFCRSRCLYCSFPAYILPNDEQLSAFFAAWDKDLAAAKREIERHR 229

Query: 70  -SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             + SI+ GGGTP+ +   +   +L  +   +      E T+EA  P ++        ++
Sbjct: 230 LKVQSIYIGGGTPTSLSNADFERVLSLVEGAFYGEHTGEFTVEAGRPDTMTPEKALSMKE 289

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQ 186
             V+R+S+  Q++++++L  +GR H   + +    L R      ++ D+I  LP +T + 
Sbjct: 290 HRVSRVSVNPQTMQQRTLERIGRAHTPEDIVRMFRLLRETGDFSINMDVILGLPGETRSD 349

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS----- 241
               + + L+ A D ++L+ L +++G+         +  LP++     ++          
Sbjct: 350 IADTMAKVLALAPDDVTLHSLALKRGSKL--KMHLEEYELPNDAEVQAMFRTAMEQVQDK 407

Query: 242 -ITSAHGLHAYEISNH------SFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRV 293
                +      +S        +  GAES++N+     +   +GIG  A S++     + 
Sbjct: 408 GFLPYYLYRQGYMSGQMENVGCARPGAESMYNMQIMDEHQTILGIGCAATSKIMNFRTKR 467

Query: 294 AIS--IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
             +    K   ++++ +      + ++  L +E   +E
Sbjct: 468 LKASFNAKDFHTYVRDIDD---YIAKRSALLAEAYRNE 502


>gi|320530171|ref|ZP_08031241.1| radical SAM domain protein [Selenomonas artemidis F0399]
 gi|320137604|gb|EFW29516.1| radical SAM domain protein [Selenomonas artemidis F0399]
          Length = 502

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 22/332 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--P 68
           +    + ++ VYV  PFC+ +C YC F +++   +     F+     ++           
Sbjct: 165 LARTDARTVSVYVGIPFCITRCLYCSFPANILPGEEKLRGFMCVLARDIAAAAADIAALG 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
            ++ +I+ GGGTP+ +     A +L+ +   +  SS VE T+EA  P S+        +K
Sbjct: 225 LTVQNIYVGGGTPTSLPNDFFAEMLEMVYNAFYGSSIVEFTVEAGRPDSMSAEKISCMKK 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQ 186
             V R+S+  QS++E++LR +GR H  +E +  +  L       ++ D+I  LP +T   
Sbjct: 285 YRVTRVSVNPQSMQERTLRRIGRRHTPAEVVQMLRDLRAAYDVHINMDVILGLPGETAED 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               + +  + A D ++L+ L I++G+   +M ++  + LPS    + +           
Sbjct: 345 VASSMAQVTALAPDDITLHALAIKRGSQLRRMMEETHVALPSGEETMRMSAAATDAVRCA 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV 293
           G   Y            E   ++  GAES++N+         IGIG  A ++V       
Sbjct: 405 GYRPYYLYRQGYMSGDLENVGYARPGAESMYNVQIMEEQQTIIGIGGAATTKVIGVRGDR 464

Query: 294 AIS--IEKHPESWLKMVR---KNGHAVVEKEF 320
             S    K   ++L+ +    +   A++  E+
Sbjct: 465 MRSVFNAKDLTTYLRDIDIYIEKRRALLRGEY 496


>gi|229016201|ref|ZP_04173151.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1273]
 gi|229022436|ref|ZP_04178973.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1272]
 gi|228738844|gb|EEL89303.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1272]
 gi|228745084|gb|EEL95136.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1273]
          Length = 496

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V    E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQAFPDVKDVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKNHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPQTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|149183016|ref|ZP_01861471.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
 gi|148849300|gb|EDL63495.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
          Length = 450

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 29/315 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PR 69
              + +Y+  PFC  KC YC F ++    K G+   + SFLT + +  Q TG        
Sbjct: 123 QKEISIYIGIPFCPTKCAYCTFPAYAILGKQGR---VDSFLTGLHYEIQETGRWLKENGV 179

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRK 127
            I++I++GGGTP+ I  + + L+ + + +++  V    E+T+EA  P ++  +  +   K
Sbjct: 180 KITTIYYGGGTPTSITAEQMDLLYEEMYRSFPDVDQVREVTVEAGRPDTITPDKLEVLNK 239

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
             ++RIS+  QS   ++L+ +GR+H+  E I   HLAR +    ++ DLI  LP + + +
Sbjct: 240 WNIDRISINPQSYTNETLKAIGRHHSVEETIEKFHLAREMGMKNINMDLIIGLPGEGVDE 299

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   L        + L+++ L+ ++ +   +        +        +  L    T  H
Sbjct: 300 FSHSLNETEKLMPESLTVHTLSFKRASEMTR--NKEKYKVAGREEIERMMALGDQWTKEH 357

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSH 291
               Y            E   ++    +S++N+         IGIG GA S+        
Sbjct: 358 NYAPYYLYRQKNILGNLENVGYALPQQDSIYNIMIMEEMQTIIGIGCGAASKFIDPETGK 417

Query: 292 RVAISIEKHPESWLK 306
               +  K P+++ +
Sbjct: 418 ITHFANPKEPKAYNE 432


>gi|163938782|ref|YP_001643666.1| coproporphyrinogen III oxidase [Bacillus weihenstephanensis KBAB4]
 gi|229010298|ref|ZP_04167507.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides DSM 2048]
 gi|229056635|ref|ZP_04196041.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH603]
 gi|229131808|ref|ZP_04260679.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST196]
 gi|229165809|ref|ZP_04293576.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH621]
 gi|163860979|gb|ABY42038.1| Coproporphyrinogen dehydrogenase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617623|gb|EEK74681.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH621]
 gi|228651646|gb|EEL07610.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST196]
 gi|228720704|gb|EEL72262.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH603]
 gi|228750993|gb|EEM00810.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           mycoides DSM 2048]
          Length = 496

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V    E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYQAFPDVKDVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKNHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAIPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPQTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|254229075|ref|ZP_04922495.1| coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262396651|ref|YP_003288504.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
 gi|151938366|gb|EDN57204.1| coproporphyrinogen III oxidase [Vibrio sp. Ex25]
 gi|262340245|gb|ACY54039.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           Ex25]
          Length = 456

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 155/382 (40%), Gaps = 25/382 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           + +N   +Y+H PFC  +C +C+F  +    +   + +  + + E++    L   ++   
Sbjct: 58  KATNKRCLYIHVPFCRVRCTFCNFFQNAAS-RALVDEYFDALMQELKEKAALPWTQNGIF 116

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ ++++ EIT+E   +      +QG    G N
Sbjct: 117 HAVYIGGGTPTDLSPAQVRVLGQAIHDHFPLAADCEITLEGRINRFSDELYQGALDGGFN 176

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS   Q  R   R  +  + +  +  +A      +  DL+Y LP QT    E +
Sbjct: 177 RFSFGVQSFNTQVRRSAKRLDDREDVLRRVSEIANEDKIPVIIDLLYGLPYQTKEVLEQD 236

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLH 249
           L   LS     L LYQL +        + + G +  P +      +Y L  +  + H + 
Sbjct: 237 LNDFLSTGAHGLDLYQLVVGGSAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMK 296

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
              +++ +    E SL+N     Y + + I                +   +   +++K +
Sbjct: 297 QLSVNHWAIDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMQHRTLATYIKAI 352

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLR--LREGI----SVKDW--EMLAGRNLDIECER 360
           ++    +      S      E L   L+     GI     +  +  E   G    +   +
Sbjct: 353 KEGQSTIAMMMKQSP----LEPLFAALKSGFDRGIVQANQLPSFMGEDTFG--FLMPLFK 406

Query: 361 NLQRQGFIERVQFSRLRCTQRG 382
             Q++G +E  + S L  T  G
Sbjct: 407 VWQQKGLVELHERS-LLLTLAG 427


>gi|225568636|ref|ZP_03777661.1| hypothetical protein CLOHYLEM_04714 [Clostridium hylemonae DSM
           15053]
 gi|225162564|gb|EEG75183.1| hypothetical protein CLOHYLEM_04714 [Clostridium hylemonae DSM
           15053]
          Length = 488

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 145/331 (43%), Gaps = 36/331 (10%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +   +YV  PFC   C YC F+S     +K   E+++ + + E+ ++ +++  + ++++
Sbjct: 147 EDGYSLYVGIPFCPSVCTYCSFSSGALEAWKDRVEDYLDALMKELAYIGKVSAGKKLNTV 206

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +    +  +LD I  N++    +E T+EA  P S+         +  + RI
Sbjct: 207 YIGGGTPTTLTACQLERLLDCIDSNFSREHLLEYTVEAGRPDSITKEKLSVLYRHRITRI 266

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+++++L  +GR H   + +    LAR   F  ++ DLI  LP ++       L+
Sbjct: 267 SINPQSMQQKTLDLIGRRHTVEDIVRTYALARETGFDNINMDLIAGLPGESAADMRDTLR 326

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH----KDGDLVLPSENVAVDLYNLTQS------- 241
           +A + A D L+++ L I++     +          L   +  +A  +  + ++       
Sbjct: 327 QAEALAPDSLTVHSLAIKRAAQMGQEQSARGYVEALERDTGTMAQVMTEMIRAAAESARR 386

Query: 242 --ITSAHGLHA------YEISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRV------ 286
             +   +          +E   ++ +    ++N+         I  G GA +++      
Sbjct: 387 MGLLPYYLYRQKNIAGNFENVGYAKVDKAGIYNILIMEEKQSIIAAGAGASTKIVLKEAA 446

Query: 287 -----KVGSHRVAISIE--KHPESWLKMVRK 310
                K G     + IE  K  ++++  + +
Sbjct: 447 ELPGSKNGKKTNLVRIENVKAIDAYIARIGE 477


>gi|291531040|emb|CBK96625.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium siraeum 70/3]
          Length = 480

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 133/309 (43%), Gaps = 24/309 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGP--RSISS 73
             + +Y+  PFC  +C YC F S      +   +++    L E+     +       + +
Sbjct: 156 RKISLYISIPFCPSRCSYCSFISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDT 215

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ +    +  ++D + + + +++  E T EA  P ++  +  +  +  GV R
Sbjct: 216 VYIGGGTPTTLSASQLDRLIDKLGE-FDIANIREFTAEAGRPDTITEDKLRTLKNGGVRR 274

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  QS+ +  L  +GR H   +   A  +AR   F  ++ D+I  LP +T   +E  L
Sbjct: 275 ISINPQSMNDSVLEAVGRRHTVKQVCEAFDIARKVGFDCINSDIIAGLPAETEHSFEASL 334

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q+    + ++++++ L++++ +  ++   +          A  + +    +    G   Y
Sbjct: 335 QQLCKLSPENITVHTLSLKRSSALFRQFGNN-----IGKGAKYMTDTAYDMLCEKGYFPY 389

Query: 252 ------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIE 298
                       E   +   G ES++N+         +  G GA +++  G +   +   
Sbjct: 390 YLYRQKNIADNLENIGYCKDGCESIYNICIMEDVQTILAAGCGASTKLYDGKNVSRVINY 449

Query: 299 KHPESWLKM 307
           K+P  ++  
Sbjct: 450 KYPYEYISR 458


>gi|253682078|ref|ZP_04862875.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
 gi|253561790|gb|EES91242.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
          Length = 478

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 71/337 (21%), Positives = 145/337 (43%), Gaps = 23/337 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQ 60
           ++  E     + S ++ +Y+  PFC   C YC F S+    R      E +++    E+ 
Sbjct: 136 IAKAEKARVNKESKNISIYIGMPFCPTTCLYCSFASNPISGRNTGKMVEPYLEKLKEEID 195

Query: 61  WMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    +  +I  ++FGGGTP+ +       I+  + K++  + NV E  IE   P S
Sbjct: 196 IIKKFINKKGLNIECVYFGGGTPTSVNNDQFESIIKKVYKSFVENRNVKEFNIECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDL 175
           +        +K  V+RIS+  Q++ E +L+ +GR+H   + I   +LAR   F  ++ D+
Sbjct: 256 INEEKLLTMKKYKVSRISINPQTMNEDTLKLIGRHHTVEDIIKKFNLARKLGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I  LP +T+   E   +  L    D L+++ ++I++G+  Y+      + +  +    ++
Sbjct: 316 IVGLPNETINHIENTCREILKLNPDSLTVHGMSIKRGSKLYEEIYIDKVRIMKQQSLNEM 375

Query: 236 YNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGA 282
           Y  T  +     ++ Y            E   +   G E L+N+         I +G  A
Sbjct: 376 YMRTAKLAKELNMNPYYMYRQKNMVGHMENVGYCKAGKEGLYNIEMIEDKQTIIALGADA 435

Query: 283 HSRVKV--GSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            +++     +        K  + ++    +     +E
Sbjct: 436 VTKLVNLKNNKIERFGNLKDVKEYITRFDEKIKGKIE 472


>gi|256060783|ref|ZP_05450945.1| coproporphyrinogen III oxidase [Brucella neotomae 5K33]
          Length = 376

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 77/363 (21%), Positives = 136/363 (37%), Gaps = 20/363 (5%)

Query: 45  KVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
           +   ENF+ + L E++ +   LT    ++ + +GGGTPS++       +L  I   +   
Sbjct: 5   EDVIENFVNALLGEIRTVSASLTARPRVAHLHWGGGTPSILNAGQFQTVLAAIRTAFDFD 64

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
            ++E  IE +P +V     +   + GVNR SLGVQ ++ +    +GR         A  L
Sbjct: 65  LSMEHAIELDPRTVTPLLAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRL 124

Query: 164 ARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            R +   R++FDLIY LP QT+       +R ++ + D ++ Y                 
Sbjct: 125 LREVGINRINFDLIYGLPLQTVETLRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLID 183

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY--- 272
           +  LP  +       +        G     I + +           E   N N+  Y   
Sbjct: 184 ENTLPDADERFRQARIVADSFIGFGYQPVGIDHFALPDDDLAIAAREGTLNRNFQGYTND 243

Query: 273 --GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
             G  IG GP + S+   G  +    +      + K V     A V    L    +    
Sbjct: 244 RCGTLIGFGPSSISQFPGGYAQNISDV----GQYRKRVEAGELATVRGYTLRDTDRIRSA 299

Query: 331 LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++  L     + +         + +    R L   G +  V+   +R T+ G +++  V 
Sbjct: 300 IISALMCNFCVDLNAVAPGMEFSDEFALLRPLVADGLVA-VEGRTIRATENGKSLIRLVA 358

Query: 391 ANL 393
           A  
Sbjct: 359 AAF 361


>gi|256378891|ref|YP_003102551.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
 gi|255923194|gb|ACU38705.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
          Length = 460

 Score =  195 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 148/382 (38%), Gaps = 22/382 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +Y H PFC + C +C+  +          ++++ + L+E + +  LT  + +++++ G
Sbjct: 67  LNLYAHVPFCRQICRFCNLYAVADAGRDDRHDDYVTAVLSEAERLAALTDRKHVTTLYLG 126

Query: 78  GGTPSLIEPQNIALI---LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           GGTPSL+ PQ +  +   L  +      +   E  +E +P++V+    +  R AG+NRI+
Sbjct: 127 GGTPSLLRPQLLERLVTGLLALFATDPATPPPETALEVDPATVDAAALRDIRAAGINRIN 186

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG QS+    +  LGR+   +  +  +  A    F  +  DLIY L  Q+   W   L++
Sbjct: 187 LGYQSMVSAEVVDLGRDRPTTSGLDLLAAALGTGFANVCVDLIYGLAGQSDEGWLSSLRQ 246

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +     +  Y LT+   T + +             +    Y +   +    G      
Sbjct: 247 VTALLPPTVCAYPLTLRPFTGYRRRGYRS----VDGALLHRRYRVADRVLREAGYRQETH 302

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH---PESWLKMVRK 310
                     +   N+W   + +G+G GA S +     R   S+         +L  VR 
Sbjct: 303 VRWVRDRGGYVQKANHWGMRNVLGVGAGARSYLWEADLRNGYSVRSRSSALRDYLDRVRA 362

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGF 367
               V +   ++ +++  +   + L     +       L G +               G 
Sbjct: 363 GQSPVRDGYRMTPDERLRKAAALNLM---DLDRNWARELLGADPVERFADRYAAFAELGL 419

Query: 368 IERVQFSRLRCTQRG---MTML 386
            E V   R R T  G     +L
Sbjct: 420 AE-VGPDRARLTAEGVQHRDLL 440


>gi|257126657|ref|YP_003164771.1| coproporphyrinogen III oxidase [Leptotrichia buccalis C-1013-b]
 gi|257050596|gb|ACV39780.1| Coproporphyrinogen dehydrogenase [Leptotrichia buccalis C-1013-b]
          Length = 507

 Score =  195 bits (497), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 22/303 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG--PRS 70
              ++G+Y+   FC  KC YC F +++ R K  +  + +I+S   E++ + QLT      
Sbjct: 177 DKETIGIYIGIAFCPTKCSYCSFPAYLLRGKYAEQYDEYIESIYHEIREIGQLTQELDLK 236

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           I++I+ GGGTPS++  + I  +L+ + +N+ +    E T EA    ++        +  G
Sbjct: 237 INTIYIGGGTPSILTAEEIDELLETVKENYNLDYLKEFTFEAGRIDTLNEEKLTIIKSYG 296

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +N+IS+  QS  E++L+ + R HN  +      LA+N+   ++ DLI  LP++T      
Sbjct: 297 INKISINPQSFNEKTLKLVNRYHNREQFDNVYKLAKNLGLEINMDLILGLPRETTEDILY 356

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +     Y +++L+++ L I+  +   K +   + VL  E +    Y   Q++T   GL 
Sbjct: 357 TMDEISKYNMENLTIHNLAIKNASRLNKENYVHEDVLDYEKI----YEKIQNVTENKGLF 412

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAIS 296
            Y            E   +S  G+ES++N+         IGIG GA +++          
Sbjct: 413 PYYMYRQKNSFQWGENLGYSLNGSESIYNIEMIEENKTIIGIGAGAITKLIWFDEEKNKD 472

Query: 297 IEK 299
             K
Sbjct: 473 NIK 475


>gi|84517091|ref|ZP_01004447.1| Coproporphyrinogen III oxidase, oxygen-independent (HemN)
           [Loktanella vestfoldensis SKA53]
 gi|84508986|gb|EAQ05447.1| Coproporphyrinogen III oxidase, oxygen-independent (HemN)
           [Loktanella vestfoldensis SKA53]
          Length = 449

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 128/384 (33%), Gaps = 22/384 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFF 76
            + VY+H PFC + C +C   +         EN+++   L      R L     +  + +
Sbjct: 50  PVSVYIHIPFCERLCWFCACATQGTSTLKPVENYLRVVQLELALLARALPAGIRMGQMHW 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+++ P  I  +   +      S +   ++E +P+ V+        K G+ R S+G
Sbjct: 110 GGGTPTILPPAMIRDLAQAVKAVIPPSDHFSFSVEIDPTLVDDAKIAMLAKMGMTRASIG 169

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q         +GR  + +     +  L       ++ DL+Y LP QT  +    + +  
Sbjct: 170 IQDFAPDVQAAIGREQSFAATKTCVDSLRAAGITSLNADLVYGLPHQTQPKLADTIAQVR 229

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S   D ++L+       T   +     D  LP E     L        +  G     I +
Sbjct: 230 SLDPDRIALFGYAHVP-TFSKRQKLIPDAALPKEEDRYALAQQAARAFTDAGYLPIGIDH 288

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
                              N+  Y D      IGIG  + S    G  + A +   +   
Sbjct: 289 FGKPADSLTQAMQAGRLRRNFQGYTDDTCPSLIGIGASSISHYAGGYVQNAAATAAY--- 345

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
            +  +     A      +  + +     +  L     I +          +       + 
Sbjct: 346 -IAQIAAGDLAGHRGYAMGPQDRLRAQAISMLMCDFQIDLTVLHQHPEAAILAPVHDAVL 404

Query: 364 RQ--GFIERVQFSRLRCTQRGMTM 385
            Q  G + R     +R   +G  +
Sbjct: 405 DQFAGMVVR-DGDTIRILPQGRPL 427


>gi|295702734|ref|YP_003595809.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium DSM 319]
 gi|294800393|gb|ADF37459.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium DSM 319]
          Length = 499

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 72/310 (23%), Positives = 142/310 (45%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGP--RSIS 72
            N + +Y+  PFC  KC YC F ++    + G   +F+     EM+ + +        I+
Sbjct: 171 KNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVTSFLGGLHYEMREVGKWLKDNNVKIT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGV 130
           ++++GGGTP+ I  + + ++ + + +++    N+ EIT+EA  P ++         K  +
Sbjct: 231 TVYYGGGTPTSITAEEMDMLYEEMYESFPDVQNIREITVEAGRPDTITEEKLAVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + +++ 
Sbjct: 291 DRISVNPQSYIQETLKAIGRHHTVEETIDKFHLSRKMGMNNINMDLIIGLPNEGVEEFQH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  +     + L+++ L+ ++ +   +        +        + +L    T   G  
Sbjct: 351 TLDESKKLLPESLTVHTLSFKRASEMTQ--NKRKYKVADRYEIGKMMDLATEWTQEQGYE 408

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV--A 294
            Y            E   +SF G ESL+N+         IG+G GA S+       +   
Sbjct: 409 PYYLYRQKNILGNLENVGYSFPGQESLYNIMIMEEKQTIIGLGCGASSKFVHPETGIITR 468

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 469 FANPKDPKSY 478


>gi|160878708|ref|YP_001557676.1| coproporphyrinogen III oxidase [Clostridium phytofermentans ISDg]
 gi|160427374|gb|ABX40937.1| Coproporphyrinogen dehydrogenase [Clostridium phytofermentans ISDg]
          Length = 491

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 138/320 (43%), Gaps = 27/320 (8%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+   R++   E ++ +   EM++       + +S++
Sbjct: 166 QNGYSIYIGIPFCPSTCHYCSFTSYPLERFEHLVEPYLMALTKEMEYASTCL-DKPLSTL 224

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +  + +  +L  I   + +    E+T+EA  P S+     Q  +  GV+RI
Sbjct: 225 YVGGGTPTTLSAKQLEYLLTKIDHYFGIKGLKELTVEAGRPDSITREKLQVLKDFGVSRI 284

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+ +++L  +GR H A++   A +LAR I    ++ D+I  L  +  +     L 
Sbjct: 285 SINPQSMRQKTLDLIGRKHTATQIEEAFYLAREIGHDNINMDIIIGLSGENPSDVIYTLD 344

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           R  S   D L+++ L I++        +    +        D+   T      +    Y 
Sbjct: 345 RIKSMNPDSLTVHTLAIKRAARLNTQKEQYKDMEAVR--VSDMLAETVKFAKENNYDPYY 402

Query: 253 ISNHSFLGAESLHNLNYWRYGD--------------YIGIGPGAHSRV------KVGSHR 292
           +     + AE+L N+ Y RYG                + +G G  S+       ++    
Sbjct: 403 LYRQKNM-AENLENVGYARYGKEGIYNILIMEEKQTILALGAGGSSKFVFHKENRIERVE 461

Query: 293 VAISIEKHPESWLKMVRKNG 312
              S+  + E   +M+++  
Sbjct: 462 NVKSVMDYTERIDEMIQRKK 481


>gi|294497361|ref|YP_003561061.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium QM B1551]
 gi|294347298|gb|ADE67627.1| oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           megaterium QM B1551]
          Length = 499

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/310 (23%), Positives = 142/310 (45%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGP--RSIS 72
            N + +Y+  PFC  KC YC F ++    + G   +F+     EM+ + +        I+
Sbjct: 171 KNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVTSFLGGLHYEMREVGKWLKDNNVKIT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNFQGYRKAGV 130
           ++++GGGTP+ I  + + ++ + + +++    N+ EIT+EA  P ++         K  +
Sbjct: 231 TVYYGGGTPTSITAEEMDMLYEEMYESFPDVQNIREITVEAGRPDTITEEKLAVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HL+R +    ++ DLI  LP + + +++ 
Sbjct: 291 DRISVNPQSYIQETLKAIGRHHTVEETIDKFHLSRKMGMNNINMDLIIGLPNEGVEEFQH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L  +     + L+++ L+ ++ +   +        +        + +L    T   G  
Sbjct: 351 TLDESKKLLPESLTVHTLSFKRASEMTQ--NKRKYKVADRYEIGKMMDLATEWTQEQGYE 408

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRV--A 294
            Y            E   +SF G ESL+N+         IG+G GA S+       +   
Sbjct: 409 PYYLYRQKNILGNLENVGYSFPGQESLYNIMIMEEKQTIIGLGCGASSKFVHPETGIITR 468

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 469 FANPKDPKSY 478


>gi|291557494|emb|CBL34611.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium siraeum V10Sc8a]
          Length = 480

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 132/309 (42%), Gaps = 24/309 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGP--RSISS 73
             + +YV  PFC  +C YC F S      +    ++    L E+     +       + +
Sbjct: 156 RKISLYVSIPFCPSRCSYCSFISASGEGALKLIGDYFGLLLKELDIYADIVKRFSLKVDT 215

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ +    +  ++D + + + +++  E T EA  P ++  +  +  +  GV R
Sbjct: 216 VYIGGGTPTTLSASQLDRLIDKLGE-FDIANIREFTAEAGRPDTITEDKLRALKNGGVRR 274

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  QS+ +  L  +GR H   +   A  +AR   F  ++ D+I  LP +T   +E  L
Sbjct: 275 ISINPQSMNDSVLEAVGRRHTVKQVCEAFDIARKVGFDCINSDIIAGLPAETEHSFEASL 334

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q+    + ++++++ L++++ +  ++   +          A  + +    +    G   Y
Sbjct: 335 QQLCELSPENITVHTLSLKRSSALFRQFGNN-----IGKGAKYMTDTAYDMLCKKGYFPY 389

Query: 252 ------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIE 298
                       E   +   G ES++N+         +  G GA +++  G +   +   
Sbjct: 390 YLYRQKNIADNLENIGYCKDGCESIYNICIMEDVQTILAAGCGASTKLYDGKNVSRVINY 449

Query: 299 KHPESWLKM 307
           K+P  ++  
Sbjct: 450 KYPYEYISR 458


>gi|52137550|emb|CAH33817.1| HutW protein [Photobacterium damselae subsp. damselae]
          Length = 463

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 150/375 (40%), Gaps = 17/375 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +YVH PFC  +C YC+F  +    ++  +++  + + E++   Q    +     +++ GG
Sbjct: 76  LYVHIPFCRVRCTYCNFFPYASSQQL-IDDYFAALMIELKLKAQQPWTQSAPFHAVYIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  +   I K++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 135 GTPTDLTAQQVKQLGTMIRKHFPLTTDCELTLEGRVNRFSDEMFDSALEGGFNRFSFGVQ 194

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  +  LA      +  DL+Y LP QT+  W+ +L+   + 
Sbjct: 195 SFDTQVRRKAKRLDDREVVLDRVAALAATDQAPIVIDLLYGLPYQTLDVWQQDLEDFRAS 254

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL    GT    +   G L  P        ++ +     S H +    +++ 
Sbjct: 255 GAHGVDLYQLIEMGGTPMKNLIDKGKLPEPADTQTKATMFLMGHDYMSHHHMRKLSVNHW 314

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N       + + +     +          +   +  +++L  +++    +
Sbjct: 315 ARDNRERSLYNSLAKTTAEVLPL----GAGAGGNIAGFGMMQHRTLDAYLAAIKRGELPI 370

Query: 316 V-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERV 371
               +  +      E  +     R  ++    + + G+ L   C    +  +  G +E V
Sbjct: 371 AMMTKQANQASLHAE--IKASFDRGVLNRSSLDSIGGKGLYSSCLPLFKAWRENGLVE-V 427

Query: 372 QFSRLRCTQRGMTML 386
               +  T  G    
Sbjct: 428 NSHYVTLTLAGQFWA 442


>gi|261324774|ref|ZP_05963971.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           neotomae 5K33]
 gi|261300754|gb|EEY04251.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           neotomae 5K33]
          Length = 385

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/363 (20%), Positives = 135/363 (37%), Gaps = 20/363 (5%)

Query: 45  KVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
           +   ENF+ + L E++ +   LT    ++ + +GGGTPS++       +L  I   +   
Sbjct: 14  EDVIENFVNALLGEIRTVSASLTARPRVAHLHWGGGTPSILNAGQFQTVLAAIRTAFDFD 73

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
            ++E  IE +P +V     +   + GVNR SLGVQ ++ +    +GR         A  L
Sbjct: 74  LSMEHAIELDPRTVTPLLAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRL 133

Query: 164 ARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            R +    ++FDLIY LP QT+       +R ++ + D ++ Y                 
Sbjct: 134 LREVGINRINFDLIYGLPLQTVETLRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLID 192

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY--- 272
           +  LP  +       +        G     I + +           E   N N+  Y   
Sbjct: 193 ENTLPDADERFRQARIVADSFIGFGYQPVGIDHFALPDDDLAIAAREGTLNRNFQGYTND 252

Query: 273 --GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
             G  IG GP + S+   G  +    +      + K V     A V    L    +    
Sbjct: 253 RCGTLIGFGPSSISQFPGGYAQNISDV----GQYRKRVEAGELATVRGYTLRDTDRIRSA 308

Query: 331 LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++  L     + +         + +    R L   G +  V+   +R T+ G +++  V 
Sbjct: 309 IISALMCNFCVDLNAVAPGMEFSDEFALLRPLVADGLVA-VEGRTIRATENGKSLIRLVA 367

Query: 391 ANL 393
           A  
Sbjct: 368 AAF 370


>gi|21328601|gb|AAM48608.1| oxygen-independent coproporphyrinogen III oxidase [uncultured
           marine proteobacterium]
          Length = 437

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/391 (20%), Positives = 146/391 (37%), Gaps = 24/391 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
             + +     ++  +YVH PFC  +C  CD  + +       + ++ S  TE+  M Q +
Sbjct: 40  LSDALKRTQEDATALYVHIPFCPSRCLSCDHLTIIEHDHRAIDRYLDSLSTELSLMAQSS 99

Query: 67  -GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            G   I+ +  GGG+P+ +    +A ++  I    TVS + EI++E NP     +  +  
Sbjct: 100 RGALLINRVHIGGGSPNYLSDGQMARLMGSIHTALTVSPDAEISMEINPRRTSRSQLELL 159

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTM 184
              GV  + L V+ ++      LGR  + S       +AR + F  ++ DL++ LP QT 
Sbjct: 160 HGLGVRNLHLEVRDVDGNVQNELGRTQSFSLLEDVYSIAREMKFDSINMDLVFGLPGQTS 219

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +        D L   Q T  +   F       +  +PS    + ++N       
Sbjct: 220 KTIKGSIALIAELGPDMLVCQQYT-RRPQQFPHQAAIDERAMPSLAEKLAIFNAVAVGLE 278

Query: 245 AHGLHAYEISNHSFLGA-----ESLHNLNYWRYG-------DYIGIGPGAHSRVKVGSHR 292
             G     ++     G      +   +L+Y  +G         +G G GA S V     +
Sbjct: 279 EEGYDWVGLNAFVRPGHKLATAQREGSLSYSAFGYAETRVSQTLGAGLGAVSEVGDIVAQ 338

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
             I      ++W   + +   A       +  +     +M  L     + V         
Sbjct: 339 NYI----DMDAWHMALDRGHLATQYIIDATDFEITRRSVMRRLMCNTEVPVSMVAQPEVL 394

Query: 353 NLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
            L      +L+ QG+  + Q S +  T  G 
Sbjct: 395 GL----LESLENQGY-TQKQGSSVHLTALGR 420


>gi|168208635|ref|ZP_02634260.1| putative ferrochelatase [Clostridium perfringens B str. ATCC 3626]
 gi|170713018|gb|EDT25200.1| putative ferrochelatase [Clostridium perfringens B str. ATCC 3626]
          Length = 480

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 149/331 (45%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++     +       D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCKMIKELNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|115379345|ref|ZP_01466453.1| elongator protein 3/MiaB/NifB [Stigmatella aurantiaca DW4/3-1]
 gi|115363659|gb|EAU62786.1| elongator protein 3/MiaB/NifB [Stigmatella aurantiaca DW4/3-1]
          Length = 381

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/369 (20%), Positives = 150/369 (40%), Gaps = 18/369 (4%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C+  +     +   E ++ +   E + +++  GP + +    GGGTP+L++   + 
Sbjct: 2   RCGFCNLFTAAGPRQDVVEGYLAALGRETRRVKEAIGPATFARAALGGGTPTLLDVAGLH 61

Query: 91  LILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            + D           N+ +++E +P +  +   Q  R  G +R+S+GVQS  E  +  + 
Sbjct: 62  TVFDLAEGVMGADLRNIPVSVEVSPETASLEKLQALRSRGTDRVSIGVQSFIEAEVAAVK 121

Query: 150 RNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R    ++   A+   R + FP ++ DLIY +  QT+  W   L+ AL Y+ + + LY L 
Sbjct: 122 RPQKTAQVEEALERIRTLDFPTLNIDLIYGMEGQTVESWLFSLRAALRYSPEEIYLYPLY 181

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +   T   K  +  D      ++ + LY   +    + G     +       A S     
Sbjct: 182 VRPLTFLGKKGRAWD------DLRLSLYRTGRDFLLSQGYTQVSMRMFRARHAPSSDGPV 235

Query: 269 YWRYGD-YIGIGPGAHSRVKVGSHRV-----AISIEKHPESWLKMVRKNGHAVVEKEFLS 322
           Y    D  +G+G GA S      +       +  +     ++ +    +   V     L 
Sbjct: 236 YRCQEDGMVGLGCGARSYTGGVHYSSEYAVGSREVRSIIAAYSERTEASFGQVGYGFQLD 295

Query: 323 SEQQADEFLMMGLRLREGISVKDWEMLA--GRNLDIECERNLQRQGFIERVQFSRLRCTQ 380
            +++   ++++ L L +G+ ++ +      G   D      L   G   R +  R+  T 
Sbjct: 296 LDERRRRYMLLSL-LADGVELEAYRERFHSGAWEDFPELAELAAHGL-ARREDRRVLLTP 353

Query: 381 RGMTMLDSV 389
            G+   D +
Sbjct: 354 AGVERSDLI 362


>gi|304437076|ref|ZP_07397039.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           sp. oral taxon 149 str. 67H29BP]
 gi|304370027|gb|EFM23689.1| oxygen-independent coproporphyrinogen III oxidase 2 [Selenomonas
           sp. oral taxon 149 str. 67H29BP]
          Length = 501

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/338 (22%), Positives = 151/338 (44%), Gaps = 22/338 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--P 68
           +  + + ++G+YV  PFC+ +C YC F SH+   +     F+   + ++    +      
Sbjct: 165 LAHEDARTVGIYVGIPFCLSRCLYCSFPSHLLPGENTLRAFMDVLVRDLAAAAEDVRTLG 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
            ++  I+ GGGTP+ +     A +L  +   +  SS  E T+EA  P S+        + 
Sbjct: 225 LTVGCIYIGGGTPTSLPDVFFAEMLKMVYNAFYGSSVREFTVEAGRPDSMSAAKITAMKA 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
             V R+S+  QS++E++L  +GR+H  S+ +  +   R      ++ D+I  LP +T   
Sbjct: 285 YRVTRVSVNPQSMQERTLERIGRHHTPSDIVRMVQDIRASMDVHINMDVILGLPGETAED 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +    +   D ++L+ L +++G+    M +   + LPS+   + +     +   A 
Sbjct: 345 VRATMAAVTALRPDDITLHALALKRGSRLRLMMETEHVALPSDAETMRMNAAATAAVRAA 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR-VKVGSHR 292
           G H Y            E   ++  GAES++N+         IGIG  A ++ + V S R
Sbjct: 405 GYHPYYLYRQGYMSGDLENVGYARPGAESIYNIRIMEERQTIIGIGGAAATKVIGVRSGR 464

Query: 293 VAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           +  +   K   ++L+ +      + ++  L   +  +E
Sbjct: 465 LHSAFHAKDLVTYLRDID---VYIEKRRALLRAEYEEE 499


>gi|182624384|ref|ZP_02952168.1| putative ferrochelatase [Clostridium perfringens D str. JGS1721]
 gi|177910387|gb|EDT72764.1| putative ferrochelatase [Clostridium perfringens D str. JGS1721]
          Length = 480

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 149/331 (45%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDIEPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++     +       D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCKMIKDLNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|110802256|ref|YP_699211.1| coproporphyrinogen III oxidase [Clostridium perfringens SM101]
 gi|110682757|gb|ABG86127.1| putative ferrochelatase [Clostridium perfringens SM101]
          Length = 480

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 148/331 (44%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKELNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|238926286|ref|ZP_04658046.1| coproporphyrinogen oxidase [Selenomonas flueggei ATCC 43531]
 gi|238885966|gb|EEQ49604.1| coproporphyrinogen oxidase [Selenomonas flueggei ATCC 43531]
          Length = 501

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 76/338 (22%), Positives = 150/338 (44%), Gaps = 22/338 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--P 68
           +  + + ++G+YV  PFC+ +C YC F SH+   +     F+     ++    +      
Sbjct: 165 LAHEDARTVGIYVGIPFCLSRCLYCSFPSHLLPGENTLRAFMDVLARDLAAAAEDVRTLG 224

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
            ++  I+ GGGTP+ +     A +L  +   +  SS  E T+EA  P S+        + 
Sbjct: 225 LTVGCIYIGGGTPTSLPDVFFAEMLKMVYNAFYRSSVREFTVEAGRPDSMSAAKITAMKA 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQ 186
             V R+S+  QS++E++L  +GR+H  S+ +  +   R      ++ D+I  LP +T   
Sbjct: 285 YRVTRVSVNPQSMQERTLERIGRHHTPSDIVRMLQDIRASMDVHINMDVILGLPGETAED 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +    +   D ++L+ L +++G+    M +   + LPS+   + +     +   A 
Sbjct: 345 VRATMAAVTALRPDDITLHALALKRGSRLRLMMETEHVALPSDAETMRMSAAATAAVRAA 404

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR-VKVGSHR 292
           G H Y            E   ++  GAES++N+         IGIG  A ++ + V S R
Sbjct: 405 GYHPYYLYRQGYMSGDLENVGYARPGAESIYNIRIMEERQTIIGIGGAAATKVIGVRSGR 464

Query: 293 VAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           +  +   K   ++L+ +      + ++  L   +  +E
Sbjct: 465 LHSAFHAKDLVTYLRDID---VYIEKRRALLRAEYEEE 499


>gi|262274017|ref|ZP_06051829.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
 gi|262221827|gb|EEY73140.1| coproporphyrinogen III oxidase, oxygen-independent [Grimontia
           hollisae CIP 101886]
          Length = 456

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 78/400 (19%), Positives = 152/400 (38%), Gaps = 28/400 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L            +   +Y+H PFC  +C YC+F  +     +  E ++++   E++W  
Sbjct: 47  LEKAHATPALSAYSPRCLYIHIPFCRVRCTYCNFFQYASSNSL-IEGYVEALRAEIRWKA 105

Query: 64  QLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             T  +     +++ GGGTP+ +  + I LI+  I   + ++ + EIT+E   +    + 
Sbjct: 106 AQTWSQSAPFQAVYIGGGTPTDLSGEQIRLIVSDIRSLFPLTPDCEITLEGRINRFGTDK 165

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALP 180
           F+   + GVNR S GVQS      R   R  +    +  I          +  DL+Y LP
Sbjct: 166 FEAALEGGVNRFSFGVQSFNTLVRRSAKRLDDRDVVLEKIQQLSRYNAAPIVLDLLYGLP 225

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLT 239
            QT+  W+ +L   L      + LYQL   +G    K+ + G L LP    +   ++ + 
Sbjct: 226 HQTLEIWQQDLNDYLESGAHGVDLYQLIEMQGLPMAKLVEAGKLPLPADTQMKASMFEMG 285

Query: 240 QSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
            +  + H      +++ S    E S++N       + + +     +      +   +   
Sbjct: 286 VNFMATHHQKRLSVNHWSSDNRERSIYNSLAKTTAEIMPL----GAGAGGNVNGCQMMQT 341

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML-------AG 351
           +  E+++  ++ N + V      S     +  ++  +  + G                 G
Sbjct: 342 RDMETYISAIKDNRYPVTMLTMASP----NRAVIAEV--KSGFDAGVLSQYKLDAVAGTG 395

Query: 352 R-NLDIECERNLQRQGF--IERVQFSR--LRCTQRGMTML 386
             +         Q  G   +E+   +R  L  T  G    
Sbjct: 396 TFDALSPLFEAWQGNGLVYLEKNGNNRSYLTLTLAGQFWA 435


>gi|28211803|ref|NP_782747.1| coproporphyrinogen III oxidase [Clostridium tetani E88]
 gi|28204245|gb|AAO36684.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 477

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/335 (21%), Positives = 155/335 (46%), Gaps = 27/335 (8%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLT 66
           E     +    + +Y+  PFC  +C YC F S+ + + K   E +I+    E++ +++  
Sbjct: 143 EETFVNKSDKFISIYIGMPFCPTRCLYCSFTSNPIGKNKKLVEEYIKCLSFEIEEIKKYI 202

Query: 67  GPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
             +  +I +++FGGGTP+ ++      I++ I  N+  + NV E T+E   P S+    F
Sbjct: 203 DKKDLTIETVYFGGGTPTSVDNHEFEYIMEKIYNNFICNRNVKEFTVECGRPDSINKEKF 262

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPK 181
           +  +K    RIS+  QS+   +L+ +GR+H   + I + + AR   F  ++ D+I  LP 
Sbjct: 263 KTMKKYDTTRISINPQSMNNDTLKVIGRSHTVEDVIRSFNEARELGFYNINMDIIVGLPG 322

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           + ++  E   ++ L    D L+++ ++I++G+  Y   +   ++   +N   +++  T  
Sbjct: 323 EGLSHIENTYKKILKLKPDSLTVHGMSIKRGSTLYHRLE--KVLNSDQNELNEIFERTSD 380

Query: 242 ITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV-- 286
           +     +  Y            E   +S  G E ++N+         I +G    S++  
Sbjct: 381 LAKELNMKPYYMYRQKNMLGNAENVGYSIKGKECIYNIQMIEERQTIIALGADGVSKIVF 440

Query: 287 ----KVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               ++        + ++ +   +MV++  HA+ E
Sbjct: 441 RDENRIKRVPNVKDVIEYNKRVEEMVKRKVHALEE 475


>gi|237748563|ref|ZP_04579043.1| coproporphyrinogen III oxidase [Oxalobacter formigenes OXCC13]
 gi|229379925|gb|EEO30016.1| coproporphyrinogen III oxidase [Oxalobacter formigenes OXCC13]
          Length = 435

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/338 (23%), Positives = 140/338 (41%), Gaps = 23/338 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-- 68
           M GQ    L +YVH PFC   C +C F  +  + K     +    L E+    ++     
Sbjct: 39  MAGQ-QRPLALYVHVPFCHHHCTFCPFYINQTK-KDFSAKYTALLLKEIADTAEVLKDVA 96

Query: 69  --RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R +  I+FGGGTP+ +E  ++A ++  +  ++ +S + E+T+E   +       Q + 
Sbjct: 97  HKRKVDVIYFGGGTPTDLEKDDMASVIRSLFDHFDISPDAEVTVEGRNTGFTAEKGQAWV 156

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG NR S+G+Q+   Q  + LGR  +  EA A ++   +    +  DL+Y LP QT   
Sbjct: 157 TAGANRFSIGLQAANTQLRKKLGRLASREEAGATLNELADTGASVVIDLLYGLPGQTEEI 216

Query: 187 WEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITS 244
              +++       +  L LY+L +  G+   K  + G +  +P       L+        
Sbjct: 217 LIEDVRYISEQTRIAGLDLYELRMFPGSPLEKAIERGKMPAIPEFPEKARLFGAAYKNLI 276

Query: 245 AHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           A G   +   +        SL+N       D I  G  A  R+      + +S  +  +S
Sbjct: 277 AGGFDHFSPRHWRRTPNERSLYNRLAGEQTDMIPFGSAAGGRLGT----IGLSTARDIKS 332

Query: 304 WLKMVRKNGHAV---------VEKEFLSSE-QQADEFL 331
           + +MV +    +         VEK     E   A E +
Sbjct: 333 YTEMVERGEKPLGRITEAPLAVEKTGFDKELDMAFETI 370


>gi|300856531|ref|YP_003781515.1| hypothetical protein CLJU_c33680 [Clostridium ljungdahlii DSM
           13528]
 gi|300436646|gb|ADK16413.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 476

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/325 (22%), Positives = 142/325 (43%), Gaps = 22/325 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLT 66
           E N+    S ++ VYV  PFC  KC YC F S+  +  K   E +++S   E++ M +  
Sbjct: 139 EKNLVNSNSRNISVYVGMPFCPTKCLYCSFASNPIKGCKELVEPYLKSLTYEIKKMSEYI 198

Query: 67  GPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVEVNNF 122
                 I  I+FGGGTP+ I+ +    ++  I  ++     + E  +E   P S+  N  
Sbjct: 199 KQHELNIECIYFGGGTPTSIDNEKFEKLMHEIYNSFVRDYKIKEFDVECGRPDSITSNKL 258

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
           +  ++ GVNRIS+  Q++ + +L+F+GRNH+ +E     H+AR   F  ++ DLI  LP 
Sbjct: 259 ETMKRYGVNRISINPQTMNDSTLKFIGRNHSVNEVREKFHMARKYGFDNINMDLIVGLPG 318

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQ 240
           + + +             D+L+++ +++++ +  Y  +  +    +        +Y  T 
Sbjct: 319 EGIEEVNKTCDEIEKLGPDNLTVHGMSVKRASRLYENIVNNISYSIAGHEELNLMYERTA 378

Query: 241 SITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVK 287
            +  +  +  Y            E   ++      L+N+         I  G  A ++V 
Sbjct: 379 LLAKSMNMKPYYMYRQKNMVGNMENIGYTSGKHRGLYNVEMIEERQTIIACGADAVTKVM 438

Query: 288 --VGSHRVAISIEKHPESWLKMVRK 310
               +     +  K    +++ + +
Sbjct: 439 FLDENRFERQANIKDVGEYVRRIDE 463


>gi|88706654|ref|ZP_01104357.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
 gi|88699150|gb|EAQ96266.1| oxygen-independent coproporphyrinogen III oxidase [Congregibacter
           litoralis KT71]
          Length = 447

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/395 (18%), Positives = 154/395 (38%), Gaps = 18/395 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y++A E         +L VY+H PFC  +C  CD  + V       ++++ +   E+Q 
Sbjct: 40  DYIAALEEEKRN-IDEALSVYIHLPFCPSRCLSCDHQTTVSHDHKQIDHYLDTLEIEVQL 98

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R +  +  GGGTP+ +    +  ++D + K + + +  E ++EAN     V+
Sbjct: 99  VTDHLGRNRRLQQLHLGGGTPNYLSELQLVRLVDILDKYFVIDAQTESSLEANAHRASVS 158

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G   ++L ++ L+    + LGR+ +       +  AR I F  ++ DL+Y L
Sbjct: 159 QLSLLHGLGFRNLNLELRDLDPTVQQALGRHQSLPVVRDVVETARQIGFTTVATDLVYGL 218

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q+ +  +  ++  L+   D +S +  +  +   F          +PS    V +++  
Sbjct: 219 PMQSASSVQKTVEELLALEPDRVSCFTYS-RRANHFQHQRAIDSRQMPSIADKVAIFSRI 277

Query: 240 QSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIG---------IGPGAHSRVKVG 289
                        +   +      S  +     + ++IG         +G G+ S   + 
Sbjct: 278 VEKFCQSDYEWIGLDCFARSQDRISEAHRTGALHRNWIGYTEQTGRGVVGLGSSSMTDLS 337

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           S  + +      E W + + +    +     LS   +A    +  L     +      +L
Sbjct: 338 S--ICVQNHADIEQWRESLERGELPMSAAARLSPNLRARRHALSDLMCNLHLDDDQHTLL 395

Query: 350 AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
             +  +    + L+  G +E ++  +L  T+ G  
Sbjct: 396 DPKQ-EYPALQALKEDGLVE-IEGDKLTMTEAGRF 428


>gi|225159064|ref|ZP_03725373.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
 gi|224802377|gb|EEG20640.1| Coproporphyrinogen dehydrogenase [Opitutaceae bacterium TAV2]
          Length = 413

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 97/404 (24%), Positives = 155/404 (38%), Gaps = 42/404 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR----QLTGPRSISSI 74
           L +YVH+PFC  +C +C F  +          +  + L E+        +L       ++
Sbjct: 16  LAIYVHFPFCGARCSFCPFYRYA--DPADWRPYRDALLREIDLAAAPLEELPDIEPARAV 73

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           +FGGGTPS +  + +A ++  I +   V+ + EITIE  PSS +       R AG  R S
Sbjct: 74  YFGGGTPSDLPGEALAELIARIRERLPVADDAEITIEGRPSSFDGEKIAVCRAAGATRFS 133

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR---------MSFDLIYALPKQTMT 185
           LGVQ+ +    R +GR  + +  IA +        R         +  DLIY LP QT  
Sbjct: 134 LGVQTFDGGVRRAVGRRLDTAPLIARLREIGAAAGRAANGEGGAPVIVDLIYGLPGQTDA 193

Query: 186 QWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKM------HKDGDLVLPSEN-VAVDLYN 237
            WE +L+  +   AV  + LY+L I  G+   +         DG  VLP+        + 
Sbjct: 194 SWERDLETVIAERAVSGVDLYRLKIFPGSPLARQAEAGGGGGDGRRVLPATEAEMARRFA 253

Query: 238 LTQSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
             +++    G       + +  GA   S++N      GD + +G GA  R +        
Sbjct: 254 RGEAVLREAGWTRLSRWHWARPGAAEASVYNRLAKGEGDIVPLGCGAGGRWQRHGFVNTP 313

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL---MMGLRLREGISVKDWEMLAGR 352
                 + W   V       +       E   +E L   +   RL        W  ++G 
Sbjct: 314 G----LDGWFAAVGNGSKPCLGWREPGPE--WEELLSAQIETCRLA----PAAWRGVSGE 363

Query: 353 NLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANL 393
               E  R L++    G +          T  G    D ++  L
Sbjct: 364 A-RREAGRLLEQWRGAGLVTTAWGGEWPLTVAGQYWSDRLLHAL 406


>gi|270488043|ref|ZP_06205117.1| coproporphyrinogen dehydrogenase [Yersinia pestis KIM D27]
 gi|270336547|gb|EFA47324.1| coproporphyrinogen dehydrogenase [Yersinia pestis KIM D27]
          Length = 331

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/318 (22%), Positives = 129/318 (40%), Gaps = 27/318 (8%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           +  + +++    + E +IE +P  +E++     R  G NR+S+GVQ   ++  R + R  
Sbjct: 1   MTVLREHFDFLPDAEQSIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQ 60

Query: 153 NASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           +     A I  A+   F   + DLIY LPKQT   +   L+R      D LS++      
Sbjct: 61  DEDFIFALIARAKALGFNSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLP 120

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE--------S 263
            +LF    K  D  LP+    +D+   T    +  G     + + +    E        +
Sbjct: 121 -SLFAAQRKIKDADLPTAEQRLDILQHTIRFLTESGYQFIGMDHFARPDDELAIAQQEGT 179

Query: 264 LHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
           LH  N+  Y      D +G+G  A S +     +     EK  E++   V + G+A+   
Sbjct: 180 LHR-NFQGYTTQGESDLLGLGVSAISMLGDSYAQN----EKDLETYYACVEQRGNALWRG 234

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------DIECERNLQRQGFIERVQ 372
             ++ +      ++  L     +S +  E   G         D E     ++ G +ER +
Sbjct: 235 LTMTEDDCLRRDVIKTLICHFQLSYQPIEQRYGIRFADYFAEDFELLAPFEQDGLVERNE 294

Query: 373 FSRLRCTQRGMTMLDSVI 390
              LR T RG  ++ ++ 
Sbjct: 295 TG-LRVTPRGRLLIRNIC 311


>gi|157691712|ref|YP_001486174.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032]
 gi|157680470|gb|ABV61614.1| coproporphyrinogen oxidase [Bacillus pumilus SAFR-032]
          Length = 499

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/312 (23%), Positives = 142/312 (45%), Gaps = 23/312 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SISSIF 75
           + +Y+  PFC  KC YC F ++  + + G+   F+     EMQ +          +++++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIKGQAGRVGTFLFGLHYEMQKIGDWLKEHRIKVTTVY 231

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           FGGGTP+ I  + + L+ + + +++  V    E+T+EA  P ++  +  +   +  ++RI
Sbjct: 232 FGGGTPTSITAEEMDLLYEEMYRSFPDVKHIREVTVEAGRPDTISPDKLEVLNRYHIDRI 291

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS E ++L+ +GR+H+  E I   HL+R      ++ DLI  LP + + +++  L 
Sbjct: 292 SINPQSYENETLKAIGRHHSVEETIEKYHLSREYGMNNINMDLIIGLPGEGLKEFQHSLN 351

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      + L+++ L+ ++ +   +        +        + +   + T AH  H Y 
Sbjct: 352 KTEELKPESLTVHTLSFKRASEMTR--NKDKYQVADREEITRMMDEAVAWTKAHDYHPYY 409

Query: 252 -----------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHR--VAISI 297
                      E   +S  G ESL+N+         IGIG GA S+            + 
Sbjct: 410 LYRQKNILGNLENVGYSLDGQESLYNIIIMEEVQTIIGIGCGAASKFIDPRSGKITQYAN 469

Query: 298 EKHPESWLKMVR 309
            K P+S+     
Sbjct: 470 PKDPKSYNDRYE 481


>gi|229587297|ref|YP_002860335.1| HemN C- region family [Clostridium botulinum Ba4 str. 657]
 gi|229260280|gb|ACQ51317.1| HemN C- region family [Clostridium botulinum Ba4 str. 657]
          Length = 461

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/389 (21%), Positives = 164/389 (42%), Gaps = 17/389 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--L 65
           +N+     S    +YVH PFC   C  C F +H        + ++ S + E++      L
Sbjct: 46  KNDSVPMNSKQATLYVHVPFCKFICSMCPF-THEPLKPQNLDLYVDSIIKEIELYSSNSL 104

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +    +SSIFFGGGT S++ P++I  IL  +   + + S+ +IT+E +P +V  +     
Sbjct: 105 SKELEVSSIFFGGGTASVLSPKHIDSILKTMKSRFDILSDCDITVECHPMTVGKDYLASL 164

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  GVNR++ GVQS  ++++  L  +    ++I  I  A    F  ++ DL+Y  P Q +
Sbjct: 165 KACGVNRVTFGVQSFNKENIDSLKLHQIPFKSIKVIKNALEVGFKTVAIDLMYNFPNQKI 224

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                ++  AL   V  +S Y L  E      +          S     +++N       
Sbjct: 225 EGLAQDINMALDLGVHSISFYALDPE-----VRELNKVKDEQNSLETEKEMFNYIFDKMK 279

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHPE 302
             G       +++  G E+    + W+      +  G GA S    G      +     +
Sbjct: 280 ETGFIQVAQPDYALPGHENKQIQDLWQSPQCQNLSFGAGAFSESFNG---FTWANVHDAD 336

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECER 360
            ++ M++     V+  +  S +     +  +G+R    + +K +E +     +   + E 
Sbjct: 337 EYISMIQNGKFPVLMGKRWSYDDALSRYPALGVRCLN-VDMKKFEDIFSIKFEDIYKYEI 395

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            L +      ++ + L  TQ+G   +D++
Sbjct: 396 ALLKSYDYIDIKDNMLIVTQKGKFFIDNI 424


>gi|75759702|ref|ZP_00739784.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228899546|ref|ZP_04063802.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 4222]
 gi|74492811|gb|EAO55945.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228860136|gb|EEN04540.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 4222]
          Length = 495

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPAQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|18310917|ref|NP_562851.1| coproporphyrinogen III oxidase [Clostridium perfringens str. 13]
 gi|18145599|dbj|BAB81641.1| probable coproporphyrinogen III oxidase [Clostridium perfringens
           str. 13]
          Length = 480

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 148/331 (44%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKGLNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|169343740|ref|ZP_02864739.1| putative ferrochelatase [Clostridium perfringens C str. JGS1495]
 gi|169298300|gb|EDS80390.1| putative ferrochelatase [Clostridium perfringens C str. JGS1495]
          Length = 480

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 148/331 (44%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVEPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKELNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENLGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|26553953|ref|NP_757887.1| coproporphyrinogen III oxidase [Mycoplasma penetrans HF-2]
 gi|26453961|dbj|BAC44291.1| oxygen-independent coproporphyrinogen III oxidase [Mycoplasma
           penetrans HF-2]
          Length = 351

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 87/378 (23%), Positives = 154/378 (40%), Gaps = 37/378 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC + C YCDF     +      ++++  ++E++            +I+  GG
Sbjct: 8   HLYIHIPFCQEICTYCDFYRTKTKDPNIINSYVKKIVSEIK-----EDNNQYKTIYIEGG 62

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+     +  L          + +N E TIEANP  +  +  +   K  VNRIS+GVQ+
Sbjct: 63  TPNF--LNDNLLDELLSPLKNKLQNNYEFTIEANPEFITSSQIETLLKNNVNRISMGVQT 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                L+ L R HN    I AI+L   +    +S D IY LP    +  E        Y 
Sbjct: 121 TNNNILKLLRRTHNIENVIEAINLLHKHNMKNISCDFIYNLPLLKNSDLEETFNFIEKYK 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           ++H+S Y L I++G++  K     ++     +         ++  +    + YEISN + 
Sbjct: 181 INHISFYSLEIKEGSILNKQKYQINV-----DKEEHHLEQIKAYFNKLNYYRYEISNWAL 235

Query: 259 -LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                S HN+ YW   D+  IG           ++   +I      W K          E
Sbjct: 236 EPAYYSKHNIAYWDLKDWKAIGISGFGLENNIYYKNNGTIL----DWKK----------E 281

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVK-DWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
           +      +  +   +MGLR   GI +  +    A   L  +   NL        ++ + +
Sbjct: 282 ESEWDDNELFENIFIMGLRKTNGIDLSVERNKKAYLYLKNKINHNLV------IIENNYI 335

Query: 377 RCTQRGMTMLDSVIANLA 394
           R   + + +L+ ++ ++ 
Sbjct: 336 RA--KNIDLLNDILIDII 351


>gi|168214145|ref|ZP_02639770.1| putative ferrochelatase [Clostridium perfringens CPE str. F4969]
 gi|170714365|gb|EDT26547.1| putative ferrochelatase [Clostridium perfringens CPE str. F4969]
          Length = 480

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 148/331 (44%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   + ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVKPYLEALSKEISAI 195

Query: 63  RQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
               L     I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVLKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKELNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|217958474|ref|YP_002337022.1| coproporphyrinogen III oxidase [Bacillus cereus AH187]
 gi|217065628|gb|ACJ79878.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH187]
          Length = 495

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|168184779|ref|ZP_02619443.1| HemN C- region family [Clostridium botulinum Bf]
 gi|182672197|gb|EDT84158.1| HemN C- region family [Clostridium botulinum Bf]
          Length = 461

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 85/389 (21%), Positives = 164/389 (42%), Gaps = 17/389 (4%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--L 65
           +N+     S    +YVH PFC   C  C F +H        + ++ S + E++      L
Sbjct: 46  KNDSVPMNSKQATLYVHVPFCKFICSMCPF-THEPLKPQNLDLYVDSIIKEIELYSSNSL 104

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +    +SSIFFGGGT S++ P++I  IL  +   + + S+ +IT+E +P +V  +     
Sbjct: 105 SKELEVSSIFFGGGTASVLSPKHIDSILKTMKSRFDILSDCDITVECHPMTVGKDYLASL 164

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           +  GVNR++ GVQS  ++++  L  +    ++I  I  A    F  ++ DL+Y  P Q +
Sbjct: 165 KACGVNRVTFGVQSFNKENIDSLKLHQIPFKSIKVIKNALEVGFKTVAIDLMYNFPNQKI 224

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                ++  AL   V  +S Y L  E      +          S     +++N       
Sbjct: 225 EGLAQDINMALDLGVHSISFYALDPE-----VRELNKVKDEQNSLETEKEMFNYIFDKMK 279

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHPE 302
             G       +++  G E+    + W+      +  G GA S    G      +     +
Sbjct: 280 ETGFIQVAQPDYALPGHENKQIQDLWQSPQCQNLSFGAGAFSESFNG---FIWANVHDAD 336

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--ECER 360
            ++ M++     V+  +  S +     +  +G+R    + +K +E +     +   + E 
Sbjct: 337 EYISMIQNGKFPVLMGKRWSYDDALSRYPALGVRCLN-VDMKKFEDIFSIKFEDIYKYEI 395

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            L +      ++ + L  TQ+G   +D++
Sbjct: 396 ALLKSYDYIDIKDNMLIVTQKGKFFIDNI 424


>gi|226323917|ref|ZP_03799435.1| hypothetical protein COPCOM_01694 [Coprococcus comes ATCC 27758]
 gi|225207466|gb|EEG89820.1| hypothetical protein COPCOM_01694 [Coprococcus comes ATCC 27758]
          Length = 282

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 113/207 (54%), Gaps = 3/207 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N   +Y+  PFC   C YC F S+ V +++   + ++ + L E+ ++ +++  + +++I
Sbjct: 58  ENGYSLYIGIPFCPTTCSYCSFTSYPVAKWQDRMDEYVDALLKELAFIAEVSKEKHLNAI 117

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ +  Q +  +L  + ++++     E TIEA  P S+  +  +  RK GV RI
Sbjct: 118 YMGGGTPTTLSAQQMDRVLSFLEEHFSFEHLKEYTIEAGRPDSITEDKLRVIRKHGVGRI 177

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  Q++++++L  +GR H   + +   HLAR   F  ++ DLI  LP +   + E  L+
Sbjct: 178 SINPQTMQQKTLDVIGRRHTVEDVVRIFHLARELGFDNINMDLIAGLPGEHPEEMEDTLR 237

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +    A D L+++ L ++ G+   +  
Sbjct: 238 QIKELAPDSLTVHALAMKHGSRLTRER 264


>gi|322382952|ref|ZP_08056784.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153072|gb|EFX45530.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 510

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 140/331 (42%), Gaps = 30/331 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRS--IS 72
            + + +Y+  PFC  KC YC F ++ ++        F++    E++   +        I+
Sbjct: 173 DHEVSLYIGIPFCPTKCAYCTFPAYDIQGNNGSVHAFLEGLHEEIRLTGEWLKRHGMGIT 232

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ +E +++  +   + K+   +    E+T+EA  P ++  +  +  ++  V
Sbjct: 233 TIYWGGGTPTSLEAEDMDALFRTMQKHLPQMDKVRELTVEAGRPDTITPDKLEVMKRWDV 292

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  + +L  +GR+H   E +    L+R +    ++ DLI  LP + + + E 
Sbjct: 293 DRISINPQSFTQLTLDTIGRHHTVKETVDKFKLSRQLGMNNINMDLIIGLPGEGVAELEG 352

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+       + L+++ L+ ++ +   K     ++V         +       T  H   
Sbjct: 353 TLEETAKLLPESLTVHTLSFKRASKMTKQRDQYEVV--GRREIAVMMQKAVEWTKQHQYV 410

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV------KVGS 290
            Y            E   +S  G ESL+N+         +G+G GA S++          
Sbjct: 411 PYYLYRQKNILGNLENVGYSLEGKESLYNIVMMEERQTILGLGCGAISKILFPEAEGKPR 470

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFL 321
                   K P  +        H V++K  L
Sbjct: 471 RIERFPNPKEPSVYND---SWKHYVLKKHEL 498


>gi|229137689|ref|ZP_04266294.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST26]
 gi|228645804|gb|EEL02033.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST26]
          Length = 496

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTKKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|206967991|ref|ZP_03228947.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH1134]
 gi|218234955|ref|YP_002365659.1| coproporphyrinogen III oxidase [Bacillus cereus B4264]
 gi|206736911|gb|EDZ54058.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH1134]
 gi|218162912|gb|ACK62904.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus B4264]
          Length = 495

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|254518564|ref|ZP_05130620.1| coproporphyrinogen dehydrogenase [Clostridium sp. 7_2_43FAA]
 gi|226912313|gb|EEH97514.1| coproporphyrinogen dehydrogenase [Clostridium sp. 7_2_43FAA]
          Length = 474

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 69/329 (20%), Positives = 148/329 (44%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E  +  +   S+ +Y+   FC  +C YC F ++ +   K     ++++   E++ M
Sbjct: 131 VAKKEQELVNKDEKSIAIYIGMAFCPTRCFYCSFTANPIGSNKKLVNPYLEALTYEIREM 190

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
           ++    R   I S++FGGGTP+ +  +    I+  I   + +   + E T+E   P S+ 
Sbjct: 191 KKYVNERNLKIESVYFGGGTPTAVNNEEFEDIMKEIYNAFVLDKEILEFTVECGRPDSIT 250

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
           +   Q  RK    RIS+  Q++ +++L+ +GR H + + I   +LARN  F  ++ D+I 
Sbjct: 251 LEKLQTMRKYNTTRISINPQTMNDETLKMIGRGHTSKDVIDKFNLARNLGFDDINMDMII 310

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + + + E      L    D L+++ L++++ ++ Y        + +  ++    +Y
Sbjct: 311 GLPGEGIKEAEYTANEILKLRPDSLTVHGLSLKRASILYENFILKKGIQIKKQDELSLMY 370

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++++  +  +  Y            E   +S  G E L+N+         I +G  A 
Sbjct: 371 EVSRNLAKSLNIEPYYMYRQKNMVGNMENLGYSKEGKECLYNIQMIEDKQTIIALGADAV 430

Query: 284 SRVKV--GSHRVAISIEKHPESWLKMVRK 310
           S+V     +        K    +   +++
Sbjct: 431 SKVVFLEENRIERFGNVKDIREYTSRIKE 459


>gi|261364695|ref|ZP_05977578.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
 gi|288566982|gb|EFC88542.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria mucosa ATCC 25996]
          Length = 606

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 5/280 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++ + +   +     +    Y+H PFC   C +C F  +  + +     +    + EM  
Sbjct: 36  QWQNIWRQQLPHAADSDALAYLHIPFCANHCVFCGFYRNAWK-ESYSSVYTDKIIEEMAA 94

Query: 62  MRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++  G   I +++FGGGTP+ ++  ++A ++    +   ++ + E TIE   S  ++ 
Sbjct: 95  EAEIRQGNGKIRAVYFGGGTPTALQTPDLARLIRACYQYLPIADDCEFTIEGRMSHFDIE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             Q   +AG NRIS+GVQ+ +    R LGR H   EA A +     I   +  DL++ LP
Sbjct: 155 KAQACIEAGANRISIGVQTFDTAIRRRLGRKHGGDEAFAYLEKLCEINAVIVVDLMFGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLT 239
            QT   W+ +L+RA +  +  L  Y   +       +M + G     P  +V  D Y   
Sbjct: 215 NQTDAVWQNDLERATALPLSGLDTYAFNLYPMLPINRMVEKGAFPAPPGFDVQADQYAYA 274

Query: 240 QSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRYGDYIG 277
               +  G +    S+ ++ G    + +N           
Sbjct: 275 VETLAQKGWNQVSNSHFAYPGRGERNRYNTLVKSNIPCWA 314


>gi|168215560|ref|ZP_02641185.1| putative ferrochelatase [Clostridium perfringens NCTC 8239]
 gi|182382404|gb|EDT79883.1| putative ferrochelatase [Clostridium perfringens NCTC 8239]
          Length = 480

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 148/331 (44%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   + ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVKPYLEALSKEISAI 195

Query: 63  RQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
               L     I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVLKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKELNPDSLTIHGMSIKRASRLHENLILHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|228957288|ref|ZP_04119050.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802374|gb|EEM49229.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 496

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|218895922|ref|YP_002444333.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus G9842]
 gi|228906618|ref|ZP_04070493.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 200]
 gi|228963965|ref|ZP_04125096.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218544190|gb|ACK96584.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus G9842]
 gi|228795695|gb|EEM43171.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228853001|gb|EEM97780.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis IBL 200]
          Length = 495

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|229159943|ref|ZP_04287949.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus R309803]
 gi|228623535|gb|EEK80355.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus R309803]
          Length = 496

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLEIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|228938136|ref|ZP_04100755.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971011|ref|ZP_04131648.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977615|ref|ZP_04138005.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis Bt407]
 gi|228782085|gb|EEM30273.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis Bt407]
 gi|228788820|gb|EEM36762.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821535|gb|EEM67541.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326938638|gb|AEA14534.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 495

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|168204882|ref|ZP_02630887.1| putative ferrochelatase [Clostridium perfringens E str. JGS1987]
 gi|170663641|gb|EDT16324.1| putative ferrochelatase [Clostridium perfringens E str. JGS1987]
          Length = 480

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 147/331 (44%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K     ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDVNPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  +   +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEQFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKELNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|153955742|ref|YP_001396507.1| coproporphyrinogen III oxidase [Clostridium kluyveri DSM 555]
 gi|219856111|ref|YP_002473233.1| hypothetical protein CKR_2768 [Clostridium kluyveri NBRC 12016]
 gi|146348600|gb|EDK35136.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219569835|dbj|BAH07819.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 482

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 78/333 (23%), Positives = 150/333 (45%), Gaps = 26/333 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++A E ++    S ++ VYV  PFC  +C YC F S+ +  +K   E +I+S + E++ +
Sbjct: 135 VAAKEKDLVNTHSRNISVYVGMPFCPTRCLYCSFTSNPIENFKDLVEPYIESLIYEIRQI 194

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
                     I  I+FGGGTP+ ++ +    I+  I  N+     + E  +E   P S+ 
Sbjct: 195 SSYIKKNKLNIECIYFGGGTPTSVDDEKFKKIICEIYDNFVYGHRIKEFNVECGRPDSMT 254

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
           +N  +  +K GVNRIS+  Q++ + +L F+GRNH   +     H+AR   F  ++ D+I 
Sbjct: 255 LNKLKTMKKYGVNRISINPQTMNDSTLEFIGRNHRVEDIKEKFHMARECGFDNINMDIIV 314

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +   +         + D L+++ +++++G+  Y  M  +   + P       +Y
Sbjct: 315 GLPGEGIEHIDKTCTEIEKLSPDSLTVHGMSVKRGSKLYENMINNTKYLTPDAVELNLMY 374

Query: 237 NLTQSITSAHGLHAYEISNHSFL-------GAESLHNLNYW------RYGDYIGIGPGAH 283
             T     A  +  Y +     +       G  + +N   +           IG G  A 
Sbjct: 375 ERTARAAEALNMEPYYLYRQKNMVGNMENIGYAARYNFGLYNIEMVEERQTIIGCGADAV 434

Query: 284 SRV------KVGSHRVAISIEKHPESWLKMVRK 310
           ++V      ++  H     ++++     +MV+K
Sbjct: 435 TKVVFLEENRLERHGNIKDVKEYVNRTEEMVKK 467


>gi|228919711|ref|ZP_04083073.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|229068542|ref|ZP_04201843.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus F65185]
 gi|229078193|ref|ZP_04210767.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock4-2]
 gi|229149209|ref|ZP_04277449.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1550]
 gi|229177407|ref|ZP_04304789.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 172560W]
 gi|229189077|ref|ZP_04316104.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 10876]
 gi|228594380|gb|EEK52172.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 10876]
 gi|228606039|gb|EEK63478.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 172560W]
 gi|228634239|gb|EEK90828.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1550]
 gi|228705115|gb|EEL57527.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock4-2]
 gi|228714684|gb|EEL66558.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus F65185]
 gi|228840065|gb|EEM85344.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 496

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|206975725|ref|ZP_03236637.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus H3081.97]
 gi|206746187|gb|EDZ57582.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus H3081.97]
          Length = 495

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|229526534|ref|ZP_04415938.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae bv. albensis VL426]
 gi|229336692|gb|EEO01710.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae bv. albensis VL426]
          Length = 455

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGVDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYELLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V    L  T  G    
Sbjct: 417 -VDQDYLTLTTAGRFWS 432


>gi|218902082|ref|YP_002449916.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH820]
 gi|218536280|gb|ACK88678.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus AH820]
          Length = 495

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  EIT+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREITVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|224419278|ref|ZP_03657284.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|313142780|ref|ZP_07804973.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|313131811|gb|EFR49428.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
          Length = 406

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 27/372 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC+  C YC FN  + +    +  + +S   EM  +++L      ++I+ GGGT
Sbjct: 48  LYIHIPFCMTLCTYCSFNRFLFQEDKAKA-YFKSLRKEMLMVKEL--GYDFNAIYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P+ +   LD     +++    E++ E++P+ + +   + ++   ++R+S+GVQS 
Sbjct: 105 TSIM-PKELCETLDLAKSLFSIK---EVSCESDPNHLHLEELEMFKGR-IDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  LR +GR     +  E I  +  A  + P ++ DLI+  P QT      +L+     
Sbjct: 160 DDGILRKVGRYEKFGSGEEVIKKLQKAIGVLPILNVDLIFNFPNQTKEMLAKDLEIIKEL 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             + ++LY L         K      +   S      LY                +S+ +
Sbjct: 220 KPEQVTLYPLMSSPS---VKSILKRSIGEVSLKNEAQLYWQILETLKDDFSP---LSSWA 273

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F    S     Y     +Y+GIG G+ S +    +    S     + +   +      V 
Sbjct: 274 FSHKGSAIFDEYVVDNDEYVGIGSGSFSFLNGTLYVNTFS----LKEYAHKINSGNMGVA 329

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQF 373
            +   S + Q    LM+ L      S KD++     NL+ +  + L        I +   
Sbjct: 330 RERKYSKKAQLQYRLMVEL-FGGKASAKDFKQKYNANLEWDLFKELAFLKLTGNIYKKDG 388

Query: 374 SRLRCTQRGMTM 385
                T +G  +
Sbjct: 389 DY-YPTTQGKYL 399


>gi|167749835|ref|ZP_02421962.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
 gi|167657147|gb|EDS01277.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
          Length = 480

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 132/309 (42%), Gaps = 24/309 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGP--RSISS 73
             + +Y+  PFC  +C YC F S      +   +++    L E+     +       + +
Sbjct: 156 RKISLYISIPFCPSRCSYCSFISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDT 215

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ +    +  +++ + + + +++  E T EA  P ++  +  +  +  GV R
Sbjct: 216 VYIGGGTPTTLSASQLDSLIEKLGE-FDIANIREFTAEAGRPDTITEDKLRALKNGGVRR 274

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMEL 191
           IS+  QS+ +  L  +GR H   +   A  +AR   F  ++ D+I  LP +T   +E  L
Sbjct: 275 ISINPQSMNDSVLEAVGRRHTVKQVCEAFDIARKVGFDCINSDIIAGLPAETERSFEDSL 334

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Q+    + ++++++ L++++ +  +    D          A  + +    +    G   Y
Sbjct: 335 QQLCKLSPENITVHTLSLKRSSALFCRFGDD-----IGKGAKYMTDTAYDMLFEKGYFPY 389

Query: 252 ------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAISIE 298
                       E   +   G ES++N+         +  G GA +++  G +   +   
Sbjct: 390 YLYRQKNIADNLENIGYCKDGCESIYNICIMEDVQTILAAGCGASTKLYDGKNVSRVINY 449

Query: 299 KHPESWLKM 307
           K+P  ++  
Sbjct: 450 KYPYEYISR 458


>gi|42780040|ref|NP_977287.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 10987]
 gi|222094624|ref|YP_002528684.1| coproporphyrinogen iii oxidase [Bacillus cereus Q1]
 gi|229199879|ref|ZP_04326468.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1293]
 gi|42735958|gb|AAS39895.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus ATCC 10987]
 gi|221238682|gb|ACM11392.1| coproporphyrinogen oxidase, anaerobic [Bacillus cereus Q1]
 gi|228583598|gb|EEK41827.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus m1293]
          Length = 496

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|194014953|ref|ZP_03053570.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase) [Bacillus
           pumilus ATCC 7061]
 gi|194013979|gb|EDW23544.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase) [Bacillus
           pumilus ATCC 7061]
          Length = 499

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 74/312 (23%), Positives = 143/312 (45%), Gaps = 23/312 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SISSIF 75
           + +Y+  PFC  KC YC F ++  + + G+   F+     EMQ +          +++++
Sbjct: 172 VSIYIGIPFCPTKCAYCTFPAYAIKGQAGRVGTFLFGLHYEMQKIGTWLKEHGIKVTTVY 231

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           FGGGTP+ I  + + L+ + + +++  V    E+T+EA  P ++  +  +   +  ++RI
Sbjct: 232 FGGGTPTSITAEEMDLLYEEMYRSFPDVKHIREVTVEAGRPDTISPDKLEVLNRYHIDRI 291

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS E ++L+ +GR+H+  E I   HL+R      ++ DLI  LP + + +++  LQ
Sbjct: 292 SINPQSYENETLKAIGRHHSVEETIEKYHLSRQYGMNNINMDLIIGLPGEGLKEFQHSLQ 351

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           +      + L+++ L+ ++ +   +        +        + +   + T AH  H Y 
Sbjct: 352 QTEELKPESLTVHTLSFKRASEMTR--NKDKYQVADREEITRMMDEAVAWTKAHDYHPYY 409

Query: 252 -----------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHR--VAISI 297
                      E   +S  G ESL+N+         IGIG GA S+            + 
Sbjct: 410 LYRQKNILGNLENVGYSLDGQESLYNIIIMEEVQTIIGIGCGAASKFIDPRSGKITQYAN 469

Query: 298 EKHPESWLKMVR 309
            K P+S+     
Sbjct: 470 PKDPKSYNDRYE 481


>gi|229042740|ref|ZP_04190479.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH676]
 gi|229108477|ref|ZP_04238094.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-15]
 gi|229126299|ref|ZP_04255317.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-Cer4]
 gi|229143592|ref|ZP_04272016.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST24]
 gi|296501604|ref|YP_003663304.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
 gi|228639849|gb|EEK96255.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-ST24]
 gi|228657291|gb|EEL13111.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BDRD-Cer4]
 gi|228675104|gb|EEL30331.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-15]
 gi|228726574|gb|EEL77792.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH676]
 gi|296322656|gb|ADH05584.1| coproporphyrinogen III oxidase [Bacillus thuringiensis BMB171]
          Length = 496

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|229101628|ref|ZP_04232350.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-28]
 gi|229114455|ref|ZP_04243872.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-3]
 gi|229171646|ref|ZP_04299221.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus MM3]
 gi|228611792|gb|EEK69039.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus MM3]
 gi|228668997|gb|EEL24422.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock1-3]
 gi|228681789|gb|EEL35944.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-28]
          Length = 496

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|153834543|ref|ZP_01987210.1| coproporphyrinogen III oxidase [Vibrio harveyi HY01]
 gi|148869062|gb|EDL68103.1| coproporphyrinogen III oxidase [Vibrio harveyi HY01]
          Length = 455

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 152/382 (39%), Gaps = 21/382 (5%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
               +N   +Y+H PFC  +C +C+F  +    K+  + +  + + E++    +   +S 
Sbjct: 55  EAAKNNKRCLYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFDALMKELREKAAMPWTQSG 113

Query: 71  -ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
              +++ GGGTP+ + P+ I ++   I   + ++++ EIT+E   +      +QG    G
Sbjct: 114 IFHAVYIGGGTPTDLSPEQIRILGQTIHDYFPLAADCEITLEGRINRFTDELYQGALDGG 173

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E
Sbjct: 174 FNRFSFGVQSFNTQVRRSAKRLDDREDVLNRVSELAKEDKIPVIIDLLYGLPYQTKEVLE 233

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHG 247
            +L   +S     L LYQL +        + + G +  P +      +Y L     + H 
Sbjct: 234 QDLNDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVKFMAKHH 293

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           +    +++ +    E SL+N     Y + + +                +   +  ++++K
Sbjct: 294 MKQLSVNHWAIDNRERSLYNSLAKTYAEVLPV----GCGAGGNIGGYGMMQHRTLDTYVK 349

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECER 360
            V +    V      S      E L   L+     GI     +  +      +  +   +
Sbjct: 350 AVNEGQSTVAMMMKQSP----LEPLFAALKSGFDRGIVQASKLPAFMDEDTFSFLMPLFK 405

Query: 361 NLQRQGFIERVQFSRLRCTQRG 382
               +G +E  + S L  T  G
Sbjct: 406 VWHDKGLVELQERS-LVLTLAG 426


>gi|229028668|ref|ZP_04184781.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1271]
 gi|229095505|ref|ZP_04226493.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-29]
 gi|228687911|gb|EEL41801.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-29]
 gi|228732631|gb|EEL83500.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus AH1271]
          Length = 496

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|196046985|ref|ZP_03114205.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB108]
 gi|225862839|ref|YP_002748217.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB102]
 gi|196022214|gb|EDX60901.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB108]
 gi|225789844|gb|ACO30061.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus 03BB102]
          Length = 495

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|165871924|ref|ZP_02216566.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0488]
 gi|167635902|ref|ZP_02394210.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0442]
 gi|170687667|ref|ZP_02878883.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0465]
 gi|170708260|ref|ZP_02898705.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0389]
 gi|190566758|ref|ZP_03019675.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis Tsiankovskii-I]
 gi|227816258|ref|YP_002816267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. CDC 684]
 gi|229602992|ref|YP_002865448.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0248]
 gi|301052526|ref|YP_003790737.1| coproporphyrinogen III oxidase [Bacillus anthracis CI]
 gi|164712355|gb|EDR17890.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0488]
 gi|167528719|gb|EDR91478.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0442]
 gi|170126781|gb|EDS95663.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0389]
 gi|170668480|gb|EDT19227.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0465]
 gi|190562310|gb|EDV16278.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis Tsiankovskii-I]
 gi|227006503|gb|ACP16246.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. CDC 684]
 gi|229267400|gb|ACQ49037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0248]
 gi|300374695|gb|ADK03599.1| coproporphyrinogen III oxidase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 495

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|260903139|ref|ZP_05911534.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
 gi|308107763|gb|EFO45303.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AQ4037]
          Length = 456

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 81/385 (21%), Positives = 156/385 (40%), Gaps = 21/385 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            +     +N   +Y+H PFC  +C +C+F  +    K+  + +  + + E++    L   
Sbjct: 53  TSDRNARNNKRCLYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFAALMQELKEKAALPWT 111

Query: 69  RS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           +S    +++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG  
Sbjct: 112 QSGIFHAVYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGAL 171

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
             G NR S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT  
Sbjct: 172 DGGFNRFSFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKE 231

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITS 244
             E +L   +S     L LYQL +        + + G +  P +      +Y L  +  +
Sbjct: 232 ILEQDLNDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMA 291

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            H +    +++ +    E SL+N     Y + + I                + + +  ++
Sbjct: 292 KHHMKQLSVNHWAVDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMLHRTLDT 347

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGR---NLDIE 357
           ++K V +    +      S      E L   L+    R  +      +  G    +  + 
Sbjct: 348 YIKAVNEGQSTIAMMMKHSP----LEPLFAALKSGFDRGIVQASKLPVFMGSDTFDFLMP 403

Query: 358 CERNLQRQGFIERVQFSRLRCTQRG 382
             +  Q +G +E  + S L  T  G
Sbjct: 404 LFKVWQDKGLVELQERS-LVLTLAG 427


>gi|196035258|ref|ZP_03102664.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus W]
 gi|195992322|gb|EDX56284.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus W]
          Length = 495

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|30261010|ref|NP_843387.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Ames]
 gi|47526162|ref|YP_017511.1| coproporphyrinogen III oxidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65318289|ref|ZP_00391248.1| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Bacillus anthracis str. A2012]
 gi|229089931|ref|ZP_04221185.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-42]
 gi|254682930|ref|ZP_05146791.1| coproporphyrinogen III oxidase [Bacillus anthracis str. CNEVA-9066]
 gi|254725717|ref|ZP_05187499.1| coproporphyrinogen III oxidase [Bacillus anthracis str. A1055]
 gi|254740009|ref|ZP_05197701.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Kruger B]
 gi|254753348|ref|ZP_05205384.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Vollum]
 gi|254758446|ref|ZP_05210473.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Australia
           94]
 gi|300119261|ref|ZP_07056955.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
 gi|30254624|gb|AAP24873.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. Ames]
 gi|47501310|gb|AAT29986.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|228693387|gb|EEL47094.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus Rock3-42]
 gi|298723369|gb|EFI64117.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|298369284|ref|ZP_06980602.1| oxygen independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298283287|gb|EFI24774.1| oxygen independent coproporphyrinogen III oxidase [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 606

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 5/280 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++ + +   +     +    Y+H PFC   C +C F  +  + +     +    + EM  
Sbjct: 36  QWQNIWRQKLPHAADSDALAYLHIPFCANHCVFCGFYRNAWK-ESYSSVYTDKIIEEMAA 94

Query: 62  MRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++  G   I +++FGGGTP+ ++  ++A ++    +   ++ + E TIE   S  ++ 
Sbjct: 95  EAEIRQGNGKIRAVYFGGGTPTALQTPDLARLIRACYQYLPIADDCEFTIEGRMSHFDIE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             Q   +AG NRIS+GVQ+ +    R LGR H   EA A +     I   +  DL++ LP
Sbjct: 155 KAQACVEAGANRISIGVQTFDTAIRRRLGRKHGGDEAFAYLEKLCEINAVIVVDLMFGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLT 239
            QT T W+ +L+RA +  +  L  Y   +       +M + G     P  +V  D Y   
Sbjct: 215 NQTDTVWQNDLERATALPLSGLDTYAFNLYPMLPINRMVEKGAFPAPPGFDVQADQYAYA 274

Query: 240 QSITSAHGLHAYEISNHSFLGA--ESLHNLNYWRYGDYIG 277
               +  G +    S+ ++ G    + +N           
Sbjct: 275 VETLAQKGWNQVSNSHFAYPGRGERNRYNTLVKSNIPCWA 314


>gi|30019044|ref|NP_830675.1| coproporphyrinogen III oxidase [Bacillus cereus ATCC 14579]
 gi|29894586|gb|AAP07876.1| Coproporphyrinogen oxidase, anaerobic [Bacillus cereus ATCC 14579]
          Length = 498

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 171 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 231 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 291 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 351 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 408

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 409 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 468

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 469 FANPKDPKSY 478


>gi|317131345|ref|YP_004090659.1| Coproporphyrinogen dehydrogenase [Ethanoligenens harbinense YUAN-3]
 gi|315469324|gb|ADU25928.1| Coproporphyrinogen dehydrogenase [Ethanoligenens harbinense YUAN-3]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 22/314 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISS 73
            S  +Y+  PFC  +C YC F SH V + K     ++     E+  +  L       + +
Sbjct: 164 RSASLYISIPFCPTRCLYCSFISHDVEKTKKLLPAYVDRLCEELAAVGALVRRLGLRLET 223

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           I+ GGGTP+ +    +A + D +   +++ S  E T+EA  P ++        R  G  R
Sbjct: 224 IYMGGGTPTSLSAPMLAQVFDAVRAAFSLDSLREYTVEAGRPDTITPEKLAAIRAGGCTR 283

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           + +  Q+L+   LR +GR H   +   A H+AR   F  ++ DLI  LP  T   +   L
Sbjct: 284 LCINPQTLDADILRRIGRAHTPEQFFEAFHMARGAGFSSINTDLIAGLPGDTPAGFSRTL 343

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              L  A + ++++ L +++ +      + G            +     +   A GL  Y
Sbjct: 344 DALLPLAPEGVTVHTLAMKRSSRLVS--EGGARYDARGGEVERMLEDAYARLDAAGLAPY 401

Query: 252 ------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKV--GSHRVAIS 296
                       E +  +  G E L+N+         +  G G  ++++   G+    + 
Sbjct: 402 YLYRQRNTAGNLENTGFAKPGHEGLYNVFIMDETHTILAAGAGGVTKMRQPGGTRIERVF 461

Query: 297 IEKHPESWLKMVRK 310
             K+P  +L    +
Sbjct: 462 NFKYPYEYLARFDE 475


>gi|228984066|ref|ZP_04144253.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228775665|gb|EEM24044.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|196037552|ref|ZP_03104863.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus NVH0597-99]
 gi|196031794|gb|EDX70390.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus cereus NVH0597-99]
          Length = 495

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 227

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 228 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 287

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 288 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 347

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 348 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 405

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 406 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 465

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 466 FANPKDPKSY 475


>gi|228926043|ref|ZP_04089123.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229120505|ref|ZP_04249751.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 95/8201]
 gi|229183196|ref|ZP_04310426.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BGSC 6E1]
 gi|228600335|gb|EEK57925.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus BGSC 6E1]
 gi|228662921|gb|EEL18515.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus 95/8201]
 gi|228833617|gb|EEM79174.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|47564821|ref|ZP_00235865.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
 gi|47558194|gb|EAL16518.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus cereus G9241]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|324324915|gb|ADY20175.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|228913554|ref|ZP_04077183.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228846141|gb|EEM91163.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 496

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|49183855|ref|YP_027107.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Sterne]
 gi|52144446|ref|YP_082382.1| coproporphyrinogen III oxidase [Bacillus cereus E33L]
 gi|49177782|gb|AAT53158.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus anthracis str. Sterne]
 gi|51977915|gb|AAU19465.1| coproporphyrinogen oxidase, anaerobic [Bacillus cereus E33L]
          Length = 498

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 171 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 231 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 291 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 351 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 408

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 409 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 468

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 469 FANPKDPKSY 478


>gi|260891520|ref|ZP_05902783.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           hofstadii F0254]
 gi|260858903|gb|EEX73403.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           hofstadii F0254]
          Length = 507

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 28/320 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG--PRS 70
              ++G+Y+   FC  KC YC F +++ R K  +  + +I S   E+  + QLT      
Sbjct: 177 DKETIGIYIGIAFCPTKCSYCSFPAYLLRGKYAERYDEYIGSIYHEISEIGQLTQELGLK 236

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           I++I+ GGGTPS++  + I  +L  + +N+ +    E T EA    +++       +  G
Sbjct: 237 INTIYIGGGTPSILTAKEIDKLLKTVKENYNLDYLKEFTFEAGRIDTLDEEKLAIIKSYG 296

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +N+IS+  QS  E++L+ + R H+  +      LA+N+   ++ DLI  LP++T      
Sbjct: 297 INKISINPQSFNEKTLKLVNRYHDREQFDNVYKLAKNLGLEINMDLILGLPRETTEDILY 356

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +     Y +++L+++ L I+  +   K +   + VL  E +    Y   +++T   GL 
Sbjct: 357 TMDEISKYDMENLTIHNLAIKNASRLNKENYAHEDVLDYEQI----YEKIENVTENKGLF 412

Query: 250 AY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV------KVGS 290
            Y            E   +S  G++S++N+         IGIG GA +++      K   
Sbjct: 413 PYYMYRQKNSFQWGENLGYSLNGSDSIYNIEMIEENKTIIGIGAGAITKLIWFDEEKNRD 472

Query: 291 HRVAISIEKHPESWLKMVRK 310
           +   +   K P  W+  ++ 
Sbjct: 473 NIKRLVNPKDPLVWMNELKD 492


>gi|228932288|ref|ZP_04095171.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229154577|ref|ZP_04282694.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 4342]
 gi|228628975|gb|EEK85685.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           cereus ATCC 4342]
 gi|228827356|gb|EEM73107.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 496

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|49476951|ref|YP_035121.1| coproporphyrinogen III oxidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118476521|ref|YP_893672.1| coproporphyrinogen III oxidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|49328507|gb|AAT59153.1| coproporphyrinogen oxidase, anaerobic [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|118415746|gb|ABK84165.1| coproporphyrinogen III oxidase, anaerobic [Bacillus thuringiensis
           str. Al Hakam]
          Length = 498

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 171 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 230

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 231 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 290

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 291 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 350

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 351 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKHNYV 408

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 409 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 468

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 469 FANPKDPKSY 478


>gi|171920823|ref|ZP_02932000.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185179039|ref|ZP_02964784.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024215|ref|ZP_02996922.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518658|ref|ZP_03004097.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524458|ref|ZP_03004467.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867661|ref|ZP_03079663.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273706|ref|ZP_03206241.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209554476|ref|YP_002284674.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225551322|ref|ZP_03772268.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903591|gb|EDT49880.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209022|gb|EDU06065.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018869|gb|EDU56909.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188997743|gb|EDU66840.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195659658|gb|EDX53038.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660718|gb|EDX53973.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249734|gb|EDY74515.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209541977|gb|ACI60206.1| coproporphyrinogen III oxidase [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225379137|gb|EEH01502.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
          Length = 354

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 25/328 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C Y DF   + +    ++ F   FL ++Q   +    +   +I+ GGG
Sbjct: 9   HLYIHIPFCNHICTYSDF-KRILKTVQSKDIFKD-FLKDVQMRIKNFKTKQFETIYLGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P+ +    +  +L  I     VS+N E TIE NP  +       ++K  +NRISL  QS
Sbjct: 67  VPNCLSNCELKQLLQTIFPY--VSNNCEYTIECNPELINQTQINLFKKYKINRISLNAQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L    L+ +   H   +   AI L        +S D +Y L   T+   +      +   
Sbjct: 125 LNNNILKKMNYIHTNQDIKNAIDLFYKNKIFNISCDFLYCLTMLTLKDLDDIFDFIVQNK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-S 257
           ++H+S Y L I+  ++  K++   +     E+   +  +   +  ++     YE+SN  S
Sbjct: 185 INHVSFYGLEIKDESILKKLNISIN-----EDQDAEQMSYVNNKFASLNFKHYEVSNWVS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            L   + HNL YW+  D+  IG GAH       +     ++K               V+ 
Sbjct: 240 DLKYVAKHNLAYWQTKDWAAIGWGAHGFENNIEYFFDAPVQK--------------PVLI 285

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKD 345
           K+ L+      + LMMGLRL+EG+++ +
Sbjct: 286 KKMLTKYDIYQQILMMGLRLKEGLNLNE 313


>gi|110801228|ref|YP_696614.1| coproporphyrinogen III oxidase [Clostridium perfringens ATCC 13124]
 gi|110675875|gb|ABG84862.1| putative ferrochelatase [Clostridium perfringens ATCC 13124]
          Length = 480

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/331 (18%), Positives = 149/331 (45%), Gaps = 24/331 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E +   +   ++ +YV  PFC  +C YC F ++ +   K   E ++++   E+  +
Sbjct: 136 VAEREESFVNKEEKNISIYVGMPFCPTRCLYCSFAANPIAGCKKDIEPYLEALSKEISAI 195

Query: 63  RQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEA-NPSSVE 118
                 +   I +++FGGGTP+ +  ++  +++  I  ++       E T+E   P S+ 
Sbjct: 196 SDYVSKKGLKIETVYFGGGTPTSVNNEHFEVLMKHIYDSFVNNKGIKEFTVECGRPDSIT 255

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +  ++  V+RIS+  QS+ +++L+ +GR H   + +   +LAR++ F  ++ D+I 
Sbjct: 256 EEKLKTMKRYEVSRISINPQSMNDKTLKSIGRGHLTEDVVDKFNLARSLDFDNINMDIII 315

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP + +++             D L+++ ++I++ +  +  +     + +  +     +Y
Sbjct: 316 GLPNEDISEVSKTCSMIKDLNPDSLTIHGMSIKRASRLHENLVLHNTITIAEQKNLNKMY 375

Query: 237 NLTQ---SITSAHGLHAY---------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
            +++      + H  + Y         E   +S    E ++N+         I +G  A 
Sbjct: 376 EMSKVLGRELNMHPYYMYRQKNMVGNMENVGYSKDNKECIYNIQMIEDKQTIIALGADAV 435

Query: 284 SRV----KVGSHRVAISIEKHPESWLKMVRK 310
           S+V    +  +     +  K  + ++K + +
Sbjct: 436 SKVVFLEEDKNRIERFANVKDVKEYVKRIEE 466


>gi|228951365|ref|ZP_04113474.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228808302|gb|EEM54812.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 496

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 135/310 (43%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +        ++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVKVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +     T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAAEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|85860533|ref|YP_462735.1| coproporphyrinogen III oxidase [Syntrophus aciditrophicus SB]
 gi|85723624|gb|ABC78567.1| coproporphyrinogen oxidase (NAD) [Syntrophus aciditrophicus SB]
          Length = 432

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 151/369 (40%), Gaps = 27/369 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN  V   +    ++  +   E++  R+         ++ GGGT
Sbjct: 39  LYLHVPFCERLCPYCSFNRFVF-EEGRCRDYFSALRREIRLYRE--KGYDFGGVYVGGGT 95

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    +   LD + + +++    E+++E NP+ +     +    AG+NR+S+G+QS 
Sbjct: 96  PTIL-LDELEETLDLVRRCFSIR---EVSVETNPNHLVPEKLERLSSAGINRLSVGIQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L+ + R+    + +E I  +  A+  F  ++ D+I+  P Q M   + +L   L  
Sbjct: 152 NDGLLKAMDRHDKYGSGAEIIERLRQAQGRFDTLNADMIFNFPSQEMAMLDRDLDILLEL 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            VD ++ Y L +   T   +      L    +      Y+  +         +   S   
Sbjct: 212 GVDQITWYPLMVSDST---RQAVTRTLGRLDKGREKAFYDRIRERLGPEYRFS---SAWC 265

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           F    ++ +     Y +Y G+G G+   +    +     I      + + + ++   ++ 
Sbjct: 266 FSRKGTMIDEYIVDYDEYAGLGSGSIGYLDGVCYANTFDI----AEYCERLSRDELPLMA 321

Query: 318 KEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQF 373
               + +++   + +M     +  +++       G  L      +    Q  G +     
Sbjct: 322 SRTFTLQERMRYDLVMRFFGTK--LNLSSLREKYGGRLSPRLWLDFLLFQLAGALRYESP 379

Query: 374 SRLRCTQRG 382
              R TQRG
Sbjct: 380 D-WRLTQRG 387


>gi|262039680|ref|ZP_06012969.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           goodfellowii F0264]
 gi|261746297|gb|EEY33847.1| oxygen-independent coproporphyrinogen III oxidase 2 [Leptotrichia
           goodfellowii F0264]
          Length = 481

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 79/329 (24%), Positives = 152/329 (46%), Gaps = 26/329 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQW 61
           ++  +  +      ++G+Y+   +C  KC YC F +++ + K  +  + + +S L E++ 
Sbjct: 137 INIVKRQIPYLDKETIGIYIGIAYCPTKCTYCSFPAYLLKGKYAERYDEYYESLLKEIKE 196

Query: 62  MRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           +  LT      IS+I+ GGGTPS++  + I  +LD +  ++ + +  E T EA    ++ 
Sbjct: 197 IGTLTKNLDLKISTIYIGGGTPSILSAKEIETLLDTVKSSFELGNLKEFTFEAGRIDTLN 256

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
               +  +K+GVN+IS+  QS  E++L+ + R HN  +  +   +A+ I   ++ DLI  
Sbjct: 257 EKKLEIIKKSGVNKISINPQSFNERTLKLVNRYHNRKQFDSIYDIAKRIGLEINMDLILG 316

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP +T       L     Y  ++L+++ L I+  +   + +   ++ L  E +    +  
Sbjct: 317 LPGETTEDILYTLDEVKKYNPENLTVHNLAIKNASKLNEENYRHEIELDYEKI----FEK 372

Query: 239 TQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGAHSR 285
              IT +  L+ Y            E   +S  GAES++N+         IGIG GA ++
Sbjct: 373 LDKITESKKLYPYYMYRQKNSFQWGENLGYSVDGAESVYNIEMIEENKMIIGIGAGAITK 432

Query: 286 V--KVGSHRVAIS--IEKHPESWLKMVRK 310
           +    G           K P  W+  +  
Sbjct: 433 LIWNEGEKNNIKRLVNPKDPLVWINELDD 461


>gi|160896925|ref|YP_001562507.1| coproporphyrinogen dehydrogenase [Delftia acidovorans SPH-1]
 gi|160362509|gb|ABX34122.1| Coproporphyrinogen dehydrogenase [Delftia acidovorans SPH-1]
          Length = 435

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/399 (20%), Positives = 156/399 (39%), Gaps = 40/399 (10%)

Query: 22  YVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           Y+  P+C       C +C F +           ++     E Q M        +SS++ G
Sbjct: 6   YIGIPYCLPTTPNHCGFCLFPTQDYGGNGAMLKYLDYLEKEAQMMACHLRHDRLSSVYVG 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGTP+L+  ++   +++   + +   S  VE T+E  P     +  Q  ++AG NR+S+G
Sbjct: 66  GGTPNLLHAEDYIRLMNITRRIFGEPSEGVERTLEGIPQLFNHDKVQAIKEAGFNRVSMG 125

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ + ++ +R+ GR     + I+A+         ++ DLIY  P+QT+     +L+    
Sbjct: 126 VQQMSDRLIRYSGRRQTHEQVISALEEFNAARLSVNVDLIYGWPEQTLHDMLRDLREVCD 185

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             V H++LYQL I   + F +  +D   +LPS     ++Y    S   + G     + + 
Sbjct: 186 LGVRHITLYQLNIAGRSDFSRQQRD---LLPSFENTYEMYEAACSYLGSRGFRQATLYDW 242

Query: 257 SF----LGAESLHNLNYWRYG-------------------DYIGIGPGAHSRV----KVG 289
                  G  S  N   ++Y                    + +GIG  A S        G
Sbjct: 243 ERIESEAGRFSHENAERYQYEQQLREFLQKDTEGVMAVTCNMVGIGYAAISGCMTWPNEG 302

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
                   ++  + + + +      V +    + E     ++   L+  + I    +E  
Sbjct: 303 GPNWIQMNKRSMQGYFECIDAGILPVEKYFEYTPEDLRLVYIFQQLQTMK-IDRTTYEQA 361

Query: 350 AGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRGMTM 385
            G  +  +       L  + +IE+ + S +R    G  +
Sbjct: 362 FGTEVVQDYAPIWDELDARQWIEKSE-STIRMVGLGRFL 399


>gi|328470248|gb|EGF41159.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus 10329]
          Length = 456

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 21/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    K+  + +  + + +++    L   +S    +++ GG
Sbjct: 65  LYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFAALMQDLKEKAALPWTQSGIFHAVYIGG 123

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR S GVQ
Sbjct: 124 GTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRFSFGVQ 183

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L   +S 
Sbjct: 184 SFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLNDFMST 243

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               L LYQL +        + + G +  P +      +Y L  +  + H +    +++ 
Sbjct: 244 GAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQLSVNHW 303

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I                + + +  ++++K V +    +
Sbjct: 304 AVDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMLHRSLDTYIKAVNEGQSTI 359

Query: 316 VEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
                 S      E L   L+    R  +      M  G    +  +   +  Q +G +E
Sbjct: 360 AMMMKHSP----LEPLFAALKSGFDRGIVQASKLPMFMGSDTFDFLMPLFKVWQDKGLVE 415

Query: 370 RVQFSRLRCTQRG 382
             + S L  T  G
Sbjct: 416 LQERS-LVLTLAG 427


>gi|261494665|ref|ZP_05991145.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309630|gb|EEY10853.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 605

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 150/380 (39%), Gaps = 19/380 (5%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGT 80
           Y H PFC   C +C F  +  +    Q  +    ++E+++   L   +  I +++FGGGT
Sbjct: 57  YFHIPFCASHCIFCGFYRNAWKENYSQ-IYTDRVISELRYESSLWRGQGKIHAVYFGGGT 115

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  +++  +   +AGVNRIS+G+Q+ 
Sbjct: 116 PTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKACIEAGVNRISIGIQTF 175

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             +  + LGR H+  EA   +     +   +  DLI+ LP QT   W+ +++ A S  + 
Sbjct: 176 NSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQTDDIWQNDIEIATSLPIS 235

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           ++ + G L  P   +     Y        A G      ++ +F 
Sbjct: 236 GLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAVEKLKAQGWQQVSNNHFAFP 295

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S        ++  ++   +++L            
Sbjct: 296 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGLSYQVQSDLKTYLDSPLDQKSLS-- 349

Query: 318 KEFLSS--EQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
             FLS   E QA   ++        +    +E         +  +  +    ++R + ++
Sbjct: 350 --FLSKHGEHQALLGVIQHSMELGYLDTTPFEQ---NAKAEKLLQQWEALDLLKR-EKNQ 403

Query: 376 LRCTQRGMTMLDSVIANLAV 395
           +     G     ++I  L +
Sbjct: 404 VYLNTSGRYWSPTLIRKLML 423


>gi|34494598|emb|CAE46549.1| putative coproporphyrinogen oxidase [Photobacterium damselae subsp.
           piscicida]
          Length = 465

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 151/377 (40%), Gaps = 19/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +YVH PFC  +C YC+F  +    ++  +++  + + E++   Q    +     +++ GG
Sbjct: 76  LYVHIPFCRVRCTYCNFFQYASSQQL-IDDYFAALMIELKLKAQQPWTQSAPFHAVYIGG 134

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  Q +  +   I K++ ++++ E+T+E   +      F    + G NR S GVQ
Sbjct: 135 GTPTDLTAQQVKQLGTMIRKHFPLTTDCELTLEGRINRFSDEMFYSALEGGFNRFSFGVQ 194

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + Q  R   R  +    +  +  LA      +  DL+Y LP QT+  W+ +L+  ++ 
Sbjct: 195 SFDTQVRRKAKRLDDREVVLDRVAALAATDQAPIVIDLLYGLPYQTLDVWQQDLEDFMAS 254

Query: 198 AVD--HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEIS 254
                 + LYQL    GT    +   G L  P        ++ +     S H +    ++
Sbjct: 255 GAHGVGVDLYQLIEMGGTPMKNLIDKGKLPEPADTQTKATMFLMGHDYMSHHHMRKLSVN 314

Query: 255 NHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           + +    E SL+N       + + +     +          +   +  +++L  +++   
Sbjct: 315 HWARDNRERSLYNSLAKTTAEVLPL----GAGAGGNIAGFGMMQHRTLDAYLAAIKRGEL 370

Query: 314 AVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIE 369
            +    +  +      E  +     R  +S    + + G+ L   C    +  +  G +E
Sbjct: 371 PIAMMTKQANQASLHAE--IKASFDRGVLSRSSLDSIGGKGLYSSCLPLFKAWRENGLVE 428

Query: 370 RVQFSRLRCTQRGMTML 386
            V    +  T  G    
Sbjct: 429 -VNSHYVTLTLAGQFWA 444


>gi|225550492|ref|ZP_03771441.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225379646|gb|EEH02008.1| coproporphyrinogen dehydrogenase [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 354

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 25/328 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC   C Y DF   + +    ++ F   FL ++Q   +    +   +I+ GGG
Sbjct: 9   HLYIHIPFCNHICTYSDF-KRILKTVQSKDIFKD-FLKDVQMRIKNFKTKQFETIYLGGG 66

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P+ +    +  +L  I     VS+N E TIE NP  +       ++K  +NRISL  QS
Sbjct: 67  VPNCLSNCELKQLLQTIFPY--VSNNCEYTIECNPELINQTQINLFKKYKINRISLNAQS 124

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L    L+ +   H   +   AI L        +S D +Y L   T+   +      +   
Sbjct: 125 LNNNILKKMNYIHTNQDIKNAIDLFYKNKIFNISCDFLYCLTILTLKDLDDIFDFIVQNK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-S 257
           ++H+S Y L I+  ++  K++   +     E+   +  +   +  ++     YE+SN  S
Sbjct: 185 INHVSFYGLEIKDESILKKLNISIN-----EDQDAEQMSYVNNKFASLNFKHYEVSNWVS 239

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
            L   + HNL YW+  D+  IG GAH       +     ++K               V+ 
Sbjct: 240 DLKYVAKHNLAYWQTKDWAAIGWGAHGFENNIEYFFDAPVQK--------------PVLI 285

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKD 345
           K+ L+      + LMMGLRL+EG+++ +
Sbjct: 286 KKMLTKYDIYQQILMMGLRLKEGLNLNE 313


>gi|269966084|ref|ZP_06180174.1| hutW protein [Vibrio alginolyticus 40B]
 gi|269829231|gb|EEZ83475.1| hutW protein [Vibrio alginolyticus 40B]
          Length = 478

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 156/380 (41%), Gaps = 21/380 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           + +N   +Y+H PFC  +C +C+F  +     +  + + ++ + E++    L   ++   
Sbjct: 80  KATNKRCLYIHVPFCRVRCTFCNFFQNAASRTL-VDEYFEALMQELREKAALPWTQNGIF 138

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ ++++ EIT+E   +      +QG  + G N
Sbjct: 139 HAVYIGGGTPTDLSPVQVRVLGQAIRDHFPLAADCEITLEGRINRFSDELYQGALEGGFN 198

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS   Q  R   R  +  + +  +  +A+     +  DL+Y LP QT    E +
Sbjct: 199 RFSFGVQSFNTQVRRSAKRLDDREDVLKRVSEIAKEDKIPVIIDLLYGLPYQTKEVLEQD 258

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLH 249
           L   LS     L LYQL +        + + G +  P +      +Y L  +  + H + 
Sbjct: 259 LNDFLSTGAHGLDLYQLVVGGSAPMLNLVEKGKIPPPSTTPEKAGMYELGVNFMAKHHMK 318

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
              +++ +    E SL+N     Y + + I                +   +  E+++K V
Sbjct: 319 QLSVNHWAIDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMQHRTLETYIKAV 374

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGRN---LDIECERNL 362
           ++    +      S      E L   L+    R  +         G +     +   +  
Sbjct: 375 KEGQSTIAMMMKQSP----LEPLFSALKSAFDRGIVQANQLPSFMGEDAFVFLLPLFKVW 430

Query: 363 QRQGFIERVQFSRLRCTQRG 382
           Q +G ++  + S +  T  G
Sbjct: 431 QAKGLVQLHERSAV-LTLAG 449


>gi|28900282|ref|NP_799937.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260364367|ref|ZP_05777015.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
 gi|260880850|ref|ZP_05893205.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|260895993|ref|ZP_05904489.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|28808593|dbj|BAC61770.1| coproporphyrinogen oxidase homolog PhuW [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308087066|gb|EFO36761.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus Peru-466]
 gi|308091527|gb|EFO41222.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus AN-5034]
 gi|308113691|gb|EFO51231.1| coproporphyrinogen dehydrogenase [Vibrio parahaemolyticus K5030]
          Length = 456

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 21/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    K+  + +  + + E++    L   +S    +++ GG
Sbjct: 65  LYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFAALMQELKEKAALPWTQSGIFHAVYIGG 123

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR S GVQ
Sbjct: 124 GTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRFSFGVQ 183

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L   +S 
Sbjct: 184 SFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLNDFMST 243

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               L LYQL +        + + G +  P +      +Y L  +  + H +    +++ 
Sbjct: 244 GAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQLSVNHW 303

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I                + + +  ++++K V +    +
Sbjct: 304 AVDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMLHRTLDTYIKAVNEGQSTI 359

Query: 316 VEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
                 S      E L   L+    R  +      +  G    +  +   +  Q +G +E
Sbjct: 360 AMMMKHSP----LEPLFAALKSGFDRGIVQASKLPVFMGSDTFDFLMPMFKVWQDKGLVE 415

Query: 370 RVQFSRLRCTQRG 382
             + S L  T  G
Sbjct: 416 LQERS-LVLTLAG 427


>gi|253826928|ref|ZP_04869813.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
 gi|253510334|gb|EES88993.1| coproporphyrinogen III oxidase [Helicobacter canadensis MIT
           98-5491]
          Length = 427

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 27/372 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC+  C YC FN  + +    +  + +S   EM  +++L      ++I+ GGGT
Sbjct: 48  LYIHIPFCMTLCTYCSFNRFLFQEDKAKA-YFKSLRKEMLMVKEL--GYDFNAIYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P+ +   LD     +++    E++ E++P+ + +   + ++   ++R+S+GVQS 
Sbjct: 105 TSIM-PKELCETLDLAKSLFSIK---EVSCESDPNHLHLEELEMFKGR-IDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  LR +GR     +  E I  +  A  + P ++ DLI+  P QT      +L+     
Sbjct: 160 DDGILRKVGRYEKFGSGEEVIKKLQKAIGVLPILNVDLIFNFPNQTKEMLAKDLEIIKEL 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             + ++LY L         K      +   S      LY                +S+ +
Sbjct: 220 KPEQVTLYPLMSSPS---VKSILKRSIGEVSLKNEAQLYWQILETLKDDFSP---LSSWA 273

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F    S     Y     +Y+GIG G+ S +    +    S     + +   +      V 
Sbjct: 274 FSHKGSAIFDEYVVDNDEYVGIGSGSFSFLNGTLYVNTFS----LKEYAHKINSGNMGVA 329

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF---IERVQF 373
            +   S + Q    LM+ L      S KD++     NL+ +  + L        I +   
Sbjct: 330 RERKYSKKAQLQYRLMVEL-FGGKASAKDFKQKYNANLEWDLFKELAFLKLTGNIYKKDG 388

Query: 374 SRLRCTQRGMTM 385
                T +G  +
Sbjct: 389 DY-YPTTQGKYL 399


>gi|228944609|ref|ZP_04106979.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228815069|gb|EEM61320.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 496

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 137/310 (44%), Gaps = 23/310 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTG--PRSIS 72
              + +Y+  PFC  KC YC F ++    + G  ++F+     E++ + +       +++
Sbjct: 169 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEVREIGKFLKEKGVTVT 228

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
           +I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K  +
Sbjct: 229 TIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNKWNI 288

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEM 189
           +RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  ++ 
Sbjct: 289 DRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDIFKH 348

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + L+++ L+ ++ +   +        +        + +  +  T  H   
Sbjct: 349 TLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGRAEITAMMHEAEEWTQKHNYV 406

Query: 250 AY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRVA 294
            Y            E   ++    ES++N+         IG+G GA S+           
Sbjct: 407 PYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGAITH 466

Query: 295 ISIEKHPESW 304
            +  K P+S+
Sbjct: 467 FANPKDPKSY 476


>gi|167639002|ref|ZP_02397276.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0193]
 gi|177653884|ref|ZP_02935956.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0174]
 gi|254734343|ref|ZP_05192056.1| coproporphyrinogen III oxidase [Bacillus anthracis str. Western
           North America USA6153]
 gi|167513132|gb|EDR88504.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0193]
 gi|172081112|gb|EDT66189.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Bacillus anthracis str. A0174]
          Length = 495

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/313 (21%), Positives = 135/313 (43%), Gaps = 29/313 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PR 69
              + +Y+  PFC  KC YC F ++    + G    + SFL  + +     G        
Sbjct: 168 KEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGS---VDSFLGGLHYEVCEIGKFLKEKGV 224

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
           ++++I++GGGTP+ I  + + ++ + + +    V +  E+T+EA  P ++     +   K
Sbjct: 225 TVTTIYYGGGTPTSITAEEMDMLYEEMYEAFPDVKNVREVTVEAGRPDTITPAKLEVLNK 284

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQ 186
             ++RIS+  QS  +++L+ +GR+H   E I   HLAR +    ++ DLI  LP + +  
Sbjct: 285 WNIDRISINPQSYHQETLKAIGRHHTVEETIEKYHLAREMGMNNINMDLIIGLPGEGLDI 344

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L        + L+++ L+ ++ +   +        +        + +  +  T  H
Sbjct: 345 FKHTLDETEKLMPESLTVHTLSFKRASEMTQ--NKRKYKVAGREEITAMMHEAEEWTQKH 402

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSH 291
               Y            E   ++    ES++N+         IG+G GA S+        
Sbjct: 403 NYVPYYLYRQKNILGNLENVGYAMPTQESIYNIVIMEEVQSIIGLGCGASSKFVHPKTGA 462

Query: 292 RVAISIEKHPESW 304
               +  K P+S+
Sbjct: 463 ITHFANPKDPKSY 475


>gi|319638239|ref|ZP_07993002.1| coproporphyrinogen III oxidase [Neisseria mucosa C102]
 gi|317400512|gb|EFV81170.1| coproporphyrinogen III oxidase [Neisseria mucosa C102]
          Length = 606

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 5/269 (1%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++ + ++  +          Y+H PFC   C +C F  +  +       +    + EM  
Sbjct: 36  QWQNIWKKKLPHAADMDALAYLHIPFCANHCVFCGFYRNAWKDSQSSV-YTDKIIEEMAA 94

Query: 62  MRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             ++ TG   I +++FGGGTP+ +  +++  ++    +   ++ + E TIE   S  ++ 
Sbjct: 95  EAEVRTGKGKIRAVYFGGGTPTALLTEDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLE 154

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             Q   +AG NRIS+GVQ+      R LGR H+  EA   +     +   +  DLI+ LP
Sbjct: 155 KAQACLEAGANRISIGVQTFNTAIRRRLGRKHSGDEAFEYLEKLCELDAVIVADLIFGLP 214

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD-GDLVLPSENVAVDLYNLT 239
            QT   W+ ++ RA    +  L  Y   +       +M +       P  ++  D Y  T
Sbjct: 215 NQTDEVWQNDIARAAELPLSGLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYT 274

Query: 240 QSITSAHGLHAYEISNHSFLGA--ESLHN 266
                  G      S+ ++ G    + +N
Sbjct: 275 VETLLEKGWEQVSNSHFAYPGRGERNRYN 303


>gi|242309881|ref|ZP_04809036.1| coproporphyrinogen III oxidase [Helicobacter pullorum MIT 98-5489]
 gi|239523882|gb|EEQ63748.1| coproporphyrinogen III oxidase [Helicobacter pullorum MIT 98-5489]
          Length = 427

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/372 (21%), Positives = 153/372 (41%), Gaps = 27/372 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC+  C YC FN  + +    +  + +S   EM  +++L      ++I+ GGGT
Sbjct: 48  LYIHVPFCMTLCTYCSFNRFLFQEDKAKA-YFESLRKEMLMVKEL--GYDFNAIYVGGGT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P+ +   LD     + +    E++ E++P+ + +   + ++   ++R+S+GVQS 
Sbjct: 105 TSIM-PEELCKTLDLAKSLFDIK---EVSCESDPNHIHLEELEMFKGR-IDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ +GR     +  E I  +  A  + P ++ DLI+  P QT      +L+   + 
Sbjct: 160 DDGILKKVGRYDKFGSGEEVIKKLQKAIGVLPILNVDLIFNFPNQTQEMLAKDLEIIKAL 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             + ++LY L         K      +   S      LY                +S+ +
Sbjct: 220 KPEQVTLYPLMSSPS---VKSILKRSIGEVSLQNEAQLYEQILETLKDDFS---SLSSWA 273

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F    S     Y     +Y+GIG G+ S +    +    S     + +   +      V 
Sbjct: 274 FSHKGSAIFDEYVVDNDEYVGIGSGSFSFLNGTLYVNTFS----LKEYAHKINSGNMGVA 329

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---GFIERVQF 373
            +   S + Q    LM+ L      S K ++     NL+ +  + L      G I + + 
Sbjct: 330 RERKYSKKAQLQYRLMVEL-FGGKASAKIFKEKYDSNLEWDLWKELMFLKITGNIYKKEG 388

Query: 374 SRLRCTQRGMTM 385
                T +G  +
Sbjct: 389 DY-YPTTQGKYL 399


>gi|319940751|ref|ZP_08015092.1| radical SAM domain-containing protein [Sutterella wadsworthensis
           3_1_45B]
 gi|319805811|gb|EFW02585.1| radical SAM domain-containing protein [Sutterella wadsworthensis
           3_1_45B]
          Length = 437

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 153/374 (40%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   C YC F+  + +    +E + Q+   EM++++ L      ++++ GGGT
Sbjct: 55  LYAHVPFCHTLCTYCTFHRFLFKEWKARE-YFQNLRREMEYVKAL--GYDFTAMYVGGGT 111

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E + +   L+   K     S  EI+ E +P  +    F+  +   V+R+S+GVQS 
Sbjct: 112 TTILEDE-LVKTLELAKKL--FPSIKEISCETDPQVIMTPQFRNLQGL-VDRMSIGVQSF 167

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            ++ L+   R     +  +    +  A+ +FP  + D+++    Q++     ++++ +  
Sbjct: 168 NDEILKLSDRYEKFGSGEQIYERLQYAQELFPTCNVDMMFGFRGQSLDVLHEDMEKIVKL 227

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L +   T      K     L       D Y +       H     ++++ +
Sbjct: 228 NPRQVTTYPLMVTSQTRASARAKIAATGL----ELADQYRVIMDSLENHYR---QLTSWT 280

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F          Y   + +Y+G+G GA S +    +    S+ +    + + +      V 
Sbjct: 281 FGRTNDEGFDEYVVDHDEYLGVGSGAFSFLGDSLYVNTFSLRR----YAERIAAGNTGVE 336

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFI--ERV 371
            +            L++GL     +S K +  + G NLD    +    L+  G I  +  
Sbjct: 337 RRRTFDKHSILQYRLLLGL-FSHRLSRKYFREVHGVNLDRALMKEMMGLRLSGAIKDDPN 395

Query: 372 QFSRLRCTQRGMTM 385
              R+  T  G  +
Sbjct: 396 DPDRIIVTDAGKFL 409


>gi|87200582|ref|YP_497839.1| coproporphyrinogen III oxidase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136263|gb|ABD27005.1| oxygen-independent coproporphyrinogen III oxidase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 449

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 76/362 (20%), Positives = 148/362 (40%), Gaps = 21/362 (5%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFF 76
            + +Y+H P+C + C YC  N+           ++++   E++ + + L     IS I F
Sbjct: 57  PVSLYLHIPYCQEICWYCGCNTGAANKTQRLGAYLEALHHEIELVARNLHSSVRISRIAF 116

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGG+P+ I+P +   ++D +  N+ ++S V ++IE +P S+E   F   R  GV + SLG
Sbjct: 117 GGGSPNAIKPTDFVRLVDRLTVNFRLASPV-LSIELDPRSLEPGWFLAIRGIGVIKASLG 175

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+L+ +    +GR         A+  L +     ++FDL+Y LP Q        L +++
Sbjct: 176 VQTLDPRVQAAIGRVQPREHIERAVDGLRKAGVDSINFDLMYGLPFQDDAILADTLDQSV 235

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D ++L+        +  +  +     LP +     +     +     G  A    +
Sbjct: 236 AMGADRIALFGYAHVPH-MIPRQKRIDVSQLPDQRARFRMAAQGHAQLVDAGYRAIGFDH 294

Query: 256 HSFLG-------AESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            +  G              N+  + D      IG+G  + S        + +  EK+   
Sbjct: 295 FALPGDDLALAAERGALRRNFQGFTDDPAPVLIGLGASSISEFPD----LFVQNEKNAGR 350

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV-KDWEMLAGRNLDIECERNL 362
           +  +V  +     +    ++E +    ++  L  + G  +  D   +    L    ER L
Sbjct: 351 YRMLVGASQLTGRKGVVRTAEDRRRGAIITDLLCQGGARIDADLLAMNRDRLVPFIERGL 410

Query: 363 QR 364
            R
Sbjct: 411 AR 412


>gi|254283659|ref|ZP_04958627.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent, putative [gamma proteobacterium NOR51-B]
 gi|219679862|gb|EED36211.1| coproporphyrinogen III oxidase, O2-independent, SAM and NAD(P)H
           dependent, putative [gamma proteobacterium NOR51-B]
          Length = 444

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/409 (19%), Positives = 153/409 (37%), Gaps = 29/409 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++++     ++   S  L +YVH PFC  KC  C  +S V       E ++     E+  
Sbjct: 38  QFVALANQQLSADVSTPLRLYVHVPFCSSKCFSCSRSSTVPSGSGEIEAYLDMLDLELAA 97

Query: 62  MR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +  Q+  PR++  I  GGGTP+L+    +  ++  I K++ V+ + E+++ ANP+ V   
Sbjct: 98  VASQVENPRALDQIHLGGGTPNLLSEAQLLRLVSSIEKHFLVTDDTEMSLAANPNRVSSG 157

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                   G +RI   V+ + E   R LGR   A         AR   F R++ D +Y L
Sbjct: 158 QLALLNGLGFDRIRFEVRDVNETVQRSLGRFTTAEMLSDVFDSARQAGFQRITTDTLYGL 217

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+       +       D +           L+          +PS    + ++   
Sbjct: 218 PSQTIESVAESARAIAELGPDRVICKAFERRPD-LYPNQRNIVASGMPSLADRLVMFQTI 276

Query: 240 QSITSAHGLHAYEISNH-------SFLGAES---LHNLNYW--RYGDYIGIGPGAHSRVK 287
               +  G     +          +    +S        Y   + G  +G+G  A S + 
Sbjct: 277 ADTFNGAGFEWVGLDCFMTASDPVARAAKDSPIYRGWDGYALGQRGVVLGVGASAFSELG 336

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS---VK 344
                V +    + ++W   +    H    +  LS + Q    ++ G+     +S   + 
Sbjct: 337 D----VVVQNTPNLKTWQDTISTTRHPARMQRVLSHQDQLARDVLEGVFTSRELSDIEMS 392

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            +    G          L+  G +  ++ +R+  T  G  +L  + + L
Sbjct: 393 WFNAETG------VLPKLKHSG-VVALEGNRVSFTDNGKIVLRQMFSGL 434


>gi|148973948|ref|ZP_01811481.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
 gi|145965645|gb|EDK30893.1| coproporphyrinogen III oxidase [Vibrionales bacterium SWAT-3]
          Length = 469

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 75/391 (19%), Positives = 161/391 (41%), Gaps = 23/391 (5%)

Query: 2   KYLSAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           K L  ++  M   G+  +   +Y+H PFC  +C +C+F  +    K+  + +  + + E+
Sbjct: 44  KKLELFDELMLSEGKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDEYFDALMVEL 102

Query: 60  QWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +   +    +S    +++ GGGTP+ + PQ +  +   I + + ++++VE+T+E   +  
Sbjct: 103 KQKAKTPWAQSGLFHAVYIGGGTPTDLSPQQVEQLGKAIRQYFPLANDVEMTLEGRINRF 162

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLI 176
               F    +AG NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+
Sbjct: 163 GDEMFDRALEAGFNRFSFGIQSFNTQVRRSAKRLDDREVVLERISALSRTEQAPIVLDLL 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDL 235
           Y LP Q+M  ++ +L+  +S     + LYQL +        + + G +  P +      +
Sbjct: 223 YGLPYQSMEVFQQDLEDYMSTGAHGIDLYQLIVGGNAPMLNLVEKGKIPPPANTPDKASM 282

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           Y       + H +    +++ +    E S++N     Y + + I                
Sbjct: 283 YLAGVEFMAKHKVKQLSVNHWTRDNRERSIYNSLAKTYAEVLPI----GCGAGGNIGGHG 338

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR--LREG-ISVKDWEMLAG 351
           +   +  +S+++ +++    +      SS     E +   L+     G +         G
Sbjct: 339 VMQHRTLDSYMESIKQGQLPIAMMTKQSS----LEPIFSTLKAGFDSGVVRRSTLPTFMG 394

Query: 352 RNLDIECE---RNLQRQGFIERVQFSRLRCT 379
           ++     +    + ++ G +E  +   L  T
Sbjct: 395 QDTFDYLKPFFSHWEKNGLVELSE-DYLSLT 424


>gi|182420366|ref|ZP_02951588.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           butyricum 5521]
 gi|237668230|ref|ZP_04528214.1| oxygen-independent coproporphyrinogen III oxidase 2
           (Coproporphyrinogenase) (Coprogen oxidase) [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182375732|gb|EDT73330.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           butyricum 5521]
 gi|237656578|gb|EEP54134.1| coproporphyrinogen dehydrogenase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 475

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/329 (20%), Positives = 143/329 (43%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  E  +  + +N++ +Y+   FC  KC YC F S+ +  +K     ++QS + E++ +
Sbjct: 133 VAKAEERIVNKDNNTIAIYIGMAFCPTKCMYCSFTSNPIGSHKKMVMPYVQSLMKEIKEI 192

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    +   + +++FGGGTP+ +      +++D I   +    NV E T+E   P ++ 
Sbjct: 193 SKYVKEKKLNVETVYFGGGTPTSVSDGEFMMVMDEIYDGFIKDGNVKEFTVECGRPDTLN 252

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
               Q  +   V RIS+  Q++ +++L+ +GR H+  +     H+AR   F  ++ D+I 
Sbjct: 253 KTKLQTMKDCNVTRISINPQTMNDKTLKLIGRTHSCEDIKEKFHMARQLGFDDINMDIII 312

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLY 236
            LP +   +             D ++++ L +++G++ Y        + +      V +Y
Sbjct: 313 GLPGEGHAEVLKTKDEIFKLKPDSITVHGLALKRGSIMYENFVLKKGIPITPHEEIVKMY 372

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAH 283
             ++++  + GL  Y            E   ++  G E ++N+         I +G  A 
Sbjct: 373 EESKNLAESLGLSPYYMYRQKNMVGNMENLGYAKEGKECIYNIQMIEERQTIIALGAAAV 432

Query: 284 SRVKV--GSHRVAISIEKHPESWLKMVRK 310
           S+V              K    ++    +
Sbjct: 433 SKVVFLEEDRLERFPNLKDLHEYVTRTDE 461


>gi|254513774|ref|ZP_05125835.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
 gi|219676017|gb|EED32382.1| putative oxygen-independent coproporphyrinogen III oxidase [gamma
           proteobacterium NOR5-3]
          Length = 456

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 74/396 (18%), Positives = 152/396 (38%), Gaps = 22/396 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            Y++A E+        SL +Y+H PFC  +C  CD  + V       + ++ +   E+Q 
Sbjct: 49  DYVAALEDEKRNV-DESLSMYIHLPFCPSRCLTCDHQTSVSHDHKQIDRYLDTLDLEIQL 107

Query: 62  MRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
           +    G  R +  +  GGGTP+ +    +  ++D + K + + +  E +++AN     ++
Sbjct: 108 VTDHLGRGRHLQQLHLGGGTPNYLSEVQLVRLVDMLDKYFKIDAQTESSLDANAQRASMS 167

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYAL 179
                   G   ++L ++ L+    + LGR+ +          AR   F  +S DL+Y L
Sbjct: 168 QLSLLHGLGFRTLNLELRDLDPTVQQALGRHQSVPVIRDVFENARQVGFDTVSTDLVYGL 227

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++   +  L   L+ + D +S +  +  +  LF          +PS    V +++  
Sbjct: 228 PMQSVASVQRTLNELLALSPDRISCFTYS-RRANLFQHQRAIDVQQMPSVADKVAIFSRI 286

Query: 240 QSITSAHGLHAYEISNHS--------FLGAESLHN--LNY--WRYGDYIGIGPGAHSRVK 287
                  G     +   +             +LH   + Y      + IG+G  + + + 
Sbjct: 287 VDRLCGAGYDWVGLDCFASEQDRISEAQRRGALHRNWIGYTAQTGRNVIGLGSSSMTDLS 346

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
               R    +      W   + +    +     LS   +A    +  L     +   D  
Sbjct: 347 SICVRNHADV----GMWRDSLERGELPMSAAARLSPNVRARRHALSDLMCNLHL-TDDQH 401

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
            L   + ++   + L+  G +E +  ++L  T+ G 
Sbjct: 402 TLLNADEEVPALQVLREDGLVE-IDGNKLTMTEAGR 436


>gi|118444631|ref|YP_877920.1| coproporphyrinogen III oxidase [Clostridium novyi NT]
 gi|118135087|gb|ABK62131.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           novyi NT]
          Length = 477

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/325 (21%), Positives = 140/325 (43%), Gaps = 23/325 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQ 60
           ++  E     +   ++ +Y+  PFC   C YC F S+    R      E +++    E+ 
Sbjct: 136 IAKAERARVNKDPKNISIYIGMPFCPTTCLYCSFASNPIAGRNTSKMVEPYLEKLNEEID 195

Query: 61  WMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    +  +I  ++FGGGTP+ I       ++  + +++     V E  +E   P S
Sbjct: 196 IIKEFIDKKGLNIECVYFGGGTPTSINENQFENLIKKVHESFISGRKVKEFNVECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDL 175
           +     +  +K  V+RIS+  Q++ E +L+ +GR+H   + I   ++AR I F  ++ D+
Sbjct: 256 ITEGKLKTMKKYNVSRISINPQTMNEDTLKLIGRHHTVEDIIEKFNMARKIGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I  LP +T+   E      L    D L+++ ++I++G+  Y+      + +  +N   ++
Sbjct: 316 IVGLPNETLNHIENTCTEILKLKPDSLTVHGMSIKRGSKLYEEIYIDKVRILEQNSLNEM 375

Query: 236 YNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGA 282
           Y  T  +     +  Y            E   +   G E L+N+         I +G  A
Sbjct: 376 YERTSKLAEELNMKPYYMYRQKNMVGHMENVGYCTAGKEGLYNIEMIEDKQTIIALGADA 435

Query: 283 HSRVK--VGSHRVAISIEKHPESWL 305
            ++V     +        K  + +L
Sbjct: 436 VTKVVYLDNNKIERFGNLKDVKEYL 460


>gi|300870273|ref|YP_003785144.1| putative coproporphyrinogen III oxidase [Brachyspira pilosicoli
           95/1000]
 gi|300687972|gb|ADK30643.1| putative coproporphyrinogen III oxidase [Brachyspira pilosicoli
           95/1000]
          Length = 350

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/323 (26%), Positives = 152/323 (47%), Gaps = 17/323 (5%)

Query: 43  RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGI----AK 98
             K   +N+  + + E++          I++I+FGGGTPS++    +  +LD I      
Sbjct: 2   NEKEIYKNYADALIEELKLRID-DYNEEINTIYFGGGTPSVLNANLLKYLLDNILNILKN 60

Query: 99  NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
              +    EITIE+N + +              RISLG+Q+  E+SL  + R+    E +
Sbjct: 61  YQDIKLIKEITIESNINDINSEYINFLESIDNIRISLGLQTFNEKSLSLINRHTELEEIV 120

Query: 159 AAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD--HLSLYQLTIEKGTLF 215
            A+ +  N     +S D I  LP     Q + ++ +AL       H+SLY L + K    
Sbjct: 121 NALKIINNSTIENISLDFISGLPLNDKLQTKKDILKALELLPKTKHISLYYLELTK---- 176

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
             + +     LP E+ +V+ Y ++ +     G   YEISN+S    ES+HN NYW+  +Y
Sbjct: 177 -SLEEKWRDYLPKEDESVEYYEISSNTLKDLGFIRYEISNYSINNYESIHNSNYWKLKNY 235

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
           +G+G  A         R      K+ +++++ +++N   + E E++  E Q  EF+ + L
Sbjct: 236 LGLGASAVGYYN----RERYENIKNVKTYIEHIKQNKKPIKEIEYIDRETQKKEFIFLSL 291

Query: 336 RLREGISVKDWEMLAGRNLDIEC 358
           R  +GI++ ++  +   +   + 
Sbjct: 292 RTVKGININNYNKMFKEDFKDKY 314


>gi|254224775|ref|ZP_04918391.1| hutW protein [Vibrio cholerae V51]
 gi|125622838|gb|EAZ51156.1| hutW protein [Vibrio cholerae V51]
          Length = 455

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 150/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|324111504|gb|EGC05485.1| radical SAM superfamily protein [Escherichia fergusonii B253]
          Length = 416

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 151/381 (39%), Gaps = 27/381 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  +C +C+  +         +N+I++ + + + M+    P   +S   GGG
Sbjct: 45  HLYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIVQARQMQ--LAPVDWASFTIGGG 102

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    +  +  G+     V + +   IE +PS          R+  V+R+S+GVQS
Sbjct: 103 TPLLLNVGQLWRLFCGVFDELQVDTQIFKAIETSPSDTTAEKVALLRQLAVSRVSIGVQS 162

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R H+A  A  A+ L R   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 163 FNDLELATLHRRHSAVNAHRALELLRRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQ 222

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L LY L                  +P +     LY   +      G     +     
Sbjct: 223 PDELFLYPL----------------YNMPRQPDMYSLYIEARDRLLHEGYTQTSMRRFVR 266

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM---VRKNGHAV 315
           +  ES        + + + +G G  S +    +    S  +     +      R +   +
Sbjct: 267 VNNES--TAESCGFENSLALGAGGRSYLGNLHYCTPWSQNQSASRQIVADFIARPDKTQI 324

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
                LS  +    F++  L   +G+S+ D++      +  D     +  +Q +  + Q 
Sbjct: 325 HHGYVLSQAEMKRRFVIKNLFFYKGLSLSDYQHQFFSEVLSDFPLLGDFIKQDYCHQ-QD 383

Query: 374 SRLRCTQRGMTMLDSVIANLA 394
           +R+  T +G+ + D +     
Sbjct: 384 NRILLTVQGLALSDQLGPQFI 404


>gi|327485889|gb|AEA80295.1| Radical SAM family HutW-like protein [Vibrio cholerae LMA3894-4]
          Length = 453

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 150/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 243 GAQGIDLYQLVVGGSAPMLNLVEKGKLSPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 302

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 303 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 358

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 359 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 414

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 415 -VEQDYLTLTTAGRFWS 430


>gi|323141788|ref|ZP_08076656.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322413737|gb|EFY04588.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 470

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 158/377 (41%), Gaps = 14/377 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSI 71
           Q +    +Y+H PFC  +C YC+F  +    +   E ++Q+ L E+ +++Q  +   +  
Sbjct: 61  QPAQPTALYLHIPFCNLRCSYCNFYRNPFEAEQ-VEEYVQALLAELDFLQQQGVFAKQRP 119

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            ++FFGGGTPS++ P  I+ +L+ I    +++ N E+T E++   +  +        GVN
Sbjct: 120 EAVFFGGGTPSVLNPAQISALLNKIHSAASLADNCEVTFESSIYDLSADKLDACIAGGVN 179

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R S GVQ+ +    R LGR +   E    +  A     ++  DLIY L  QT      ++
Sbjct: 180 RFSFGVQAFDTHLRRSLGRLNAKEEVTGKLEEAAAKGVKVIIDLIYGLNGQTQAMLLNDI 239

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHGLHA 250
             AL+  V  + LY+L I   +   +    G++     + +  +++    ++ +  G  A
Sbjct: 240 GTALACGVSGMDLYKLQILPKSPLGQAIAKGNIKYEYNDRMLAEMFVAADALLAEQGAKA 299

Query: 251 YEISNHS-FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
               + +      S +N       + I  G      +  G +    ++E+    ++K   
Sbjct: 300 LSCCHWAMREDERSGYNTLVKSGANIITCGAACGGHM--GMYNYMKTMER--SDYVKKAT 355

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECERNLQRQGFI 368
              +AV+     +      E L    +   G +     +  +  + +      L++   +
Sbjct: 356 SGQYAVMGMGKHNENYLLLEKL--SGQCDAGKLDFALLKQYSDADWESLLAPLLEQWELL 413

Query: 369 ERV--QFSRLRCTQRGM 383
           + +     +   T +G 
Sbjct: 414 DLLYAVDGKYYFTAKGK 430


>gi|261491863|ref|ZP_05988442.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261312518|gb|EEY13642.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 605

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 5/261 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGT 80
           Y H PFC   C +C F  +  +    Q  +    ++E+++   L   +  I +++FGGGT
Sbjct: 57  YFHIPFCASHCIFCGFYRNAWKENYSQ-IYTDRVISELRYESSLWRGQGKIHAVYFGGGT 115

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  +++  +   +AGVNRIS+G+Q+ 
Sbjct: 116 PTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKACIEAGVNRISIGIQTF 175

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             +  + LGR H+  EA   +     +   +  DLI+ LP QT   W+ +++ A S  + 
Sbjct: 176 NSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQTDDIWQNDIEIATSLPIS 235

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           ++ + G L  P   +     Y        A G      ++ +F 
Sbjct: 236 GLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAVEKLKAQGWQQVSNNHFAFP 295

Query: 260 --GAESLHNLNYWRYGDYIGI 278
             G  + +N         +  
Sbjct: 296 NRGERNRYNTLVKSNMPCLAF 316


>gi|153824755|ref|ZP_01977422.1| coproporphyrinogen III oxidase [Vibrio cholerae MZO-2]
 gi|149741711|gb|EDM55740.1| coproporphyrinogen III oxidase [Vibrio cholerae MZO-2]
          Length = 453

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 243 GAQGVDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 302

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 303 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 358

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q   E L   L+     G+     +  +      +  +      Q+ G +E
Sbjct: 359 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIGLVE 414

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 415 -VEQDYLTLTTAGRFWS 430


>gi|229522439|ref|ZP_04411855.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TM 11079-80]
 gi|229340424|gb|EEO05430.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TM 11079-80]
          Length = 455

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I  ++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRDSFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLSPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|222035586|emb|CAP78331.1| coproporphyrinogen III oxidase and related Fes oxidoreductase
           [Escherichia coli LF82]
          Length = 416

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 151/376 (40%), Gaps = 27/376 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  +C +C+  +         +N+I++ + + Q M+        +S   GGG
Sbjct: 45  HLYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIVQAQQMQ--LEAVDWASFTIGGG 102

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    ++ +  G+     V +++   IE +PS          R+  VNR+S+GVQS
Sbjct: 103 TPLLLNVGQLSRLFRGVFDELQVDAHIFKAIETSPSDTTAEKVALLRQLAVNRVSIGVQS 162

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R H+A  A  A+ L     FP ++ D+IY +P QT       L +AL Y 
Sbjct: 163 FNDLELATLHRRHSAENAHRALELLHRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQ 222

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L LY L                  +P +    +LY   +            +     
Sbjct: 223 PDELFLYPL----------------YNMPRQPDMYNLYIEARDRLLHECYTQTSMRRFVR 266

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS-IEKHPESWLKMV--RKNGHAV 315
           +  +S        + + + +G G  S +    +    S  +      +     R +   +
Sbjct: 267 VNNDSA--AESCGFENSLALGAGGRSYLGNLHYCTPWSQNQPASRQIVADFIDRPDKTLI 324

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
                LS  +    F++  L   +G+S+ D++     +   D     +  +Q +  + Q 
Sbjct: 325 SHGYVLSQAEMKRRFIIKNLFFYKGLSLSDYQHQFSSHALSDFPLLGDFIKQDYCHQ-QD 383

Query: 374 SRLRCTQRGMTMLDSV 389
           +R+  T +G+ + D +
Sbjct: 384 NRILLTAQGLALSDQL 399


>gi|153212367|ref|ZP_01948149.1| hutW protein [Vibrio cholerae 1587]
 gi|229528187|ref|ZP_04417578.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae 12129(1)]
 gi|124116575|gb|EAY35395.1| hutW protein [Vibrio cholerae 1587]
 gi|229334549|gb|EEO00035.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae 12129(1)]
          Length = 455

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 150/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLSPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|121586417|ref|ZP_01676205.1| hutW protein [Vibrio cholerae 2740-80]
 gi|147672487|ref|YP_001215169.1| coproporphyrinogen III oxidase [Vibrio cholerae O395]
 gi|153819201|ref|ZP_01971868.1| hutW protein [Vibrio cholerae NCTC 8457]
 gi|227812475|ref|YP_002812485.1| hutW protein [Vibrio cholerae M66-2]
 gi|229505946|ref|ZP_04395455.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae BX 330286]
 gi|262169175|ref|ZP_06036868.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           RC27]
 gi|298499688|ref|ZP_07009494.1| coproporphyrinogen III oxidase [Vibrio cholerae MAK 757]
 gi|121549395|gb|EAX59424.1| hutW protein [Vibrio cholerae 2740-80]
 gi|126510235|gb|EAZ72829.1| hutW protein [Vibrio cholerae NCTC 8457]
 gi|146314870|gb|ABQ19410.1| hutW protein [Vibrio cholerae O395]
 gi|227011617|gb|ACP07828.1| hutW protein [Vibrio cholerae M66-2]
 gi|227015556|gb|ACP11765.1| hutW protein [Vibrio cholerae O395]
 gi|229356297|gb|EEO21215.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae BX 330286]
 gi|262022456|gb|EEY41164.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           RC27]
 gi|297541669|gb|EFH77720.1| coproporphyrinogen III oxidase [Vibrio cholerae MAK 757]
          Length = 455

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 151/377 (40%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  ++L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKSLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|91228745|ref|ZP_01262656.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
 gi|91187691|gb|EAS74012.1| coproporphyrinogen III oxidase [Vibrio alginolyticus 12G01]
          Length = 478

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 154/380 (40%), Gaps = 21/380 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
           + +N   +Y+H PFC  +C +C+F  +     +  + + ++ + E++    L   ++   
Sbjct: 80  KATNKRCLYIHVPFCRVRCTFCNFFQNAASRTL-VDEYFEALMQELREKAALPWTQNGIF 138

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ ++++ EIT+E   +      +QG    G N
Sbjct: 139 HAVYIGGGTPTDLSPIQVRVLGQAIRDHFPLAADCEITLEGRINRFSDELYQGALDGGFN 198

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R S GVQS   Q  R   R  +  + +  +  +A+     +  DL+Y LP QT    E +
Sbjct: 199 RFSFGVQSFNTQVRRSAKRLDDREDVLKRVSEIAKEDKIPVIIDLLYGLPYQTKEVLEQD 258

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLH 249
           L   LS     L LYQL +        + + G +  P +      +Y    +  + H + 
Sbjct: 259 LNDFLSTGAHGLDLYQLVVGGSAPMLNLVEKGKIPPPATTPEKAGMYEFGVNFMAKHHMK 318

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
              +++ +    E SL+N     Y + + I                +   +  E+++K V
Sbjct: 319 QLSVNHWAIDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMQHRTLETYIKAV 374

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGRN---LDIECERNL 362
           ++    +      S      E L   L+    R  +         G +     +   +  
Sbjct: 375 KEGQSTIAMMMKQSP----LEPLFSALKSAFDRGIVQANQLPSFMGEDAFVFLLPLFKVW 430

Query: 363 QRQGFIERVQFSRLRCTQRG 382
           Q +G ++  + S +  T  G
Sbjct: 431 QAKGLVQLHERSAV-LTLAG 449


>gi|254362721|ref|ZP_04978805.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica PHL213]
 gi|153094346|gb|EDN75201.1| possible oxygen-independent coproporphyrinogen III oxidase
           [Mannheimia haemolytica PHL213]
          Length = 581

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 114/261 (43%), Gaps = 5/261 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGT 80
           Y H PFC   C +C F  +  +    Q  +    ++E+++   L   +  I +++FGGGT
Sbjct: 33  YFHIPFCASHCIFCGFYRNAWKENYSQ-IYTDRVISELRYESSLWRGQGKIHAVYFGGGT 91

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  +++  +   +AGVNRIS+G+Q+ 
Sbjct: 92  PTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKACIEAGVNRISIGIQTF 151

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             +  + LGR H+  EA   +     +   +  DLI+ LP QT   W+ +++ A S  + 
Sbjct: 152 NSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQTDDIWQNDIEIATSLPIS 211

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           ++ + G L  P   +     Y        A G      ++ +F 
Sbjct: 212 GLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAVEKLKAQGWQQVSNNHFAFP 271

Query: 260 --GAESLHNLNYWRYGDYIGI 278
             G  + +N         +  
Sbjct: 272 NRGERNRYNTLVKSNMPCLAF 292


>gi|329577058|gb|EGG58531.1| radical SAM domain protein [Enterococcus faecalis TX1467]
          Length = 194

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 100/180 (55%), Gaps = 2/180 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 5   SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +  + + ++L G+ +  T     E T+EANP  +     Q  +  GVNR+S+GVQ+
Sbjct: 64  TPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQVMKNYGVNRLSMGVQT 123

Query: 140 LEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +++ L+ +GR H A++    +  L +  F  +S DLIYALP QT+ ++     ++LS  
Sbjct: 124 FDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQTLVKFSRYFDKSLSIG 183


>gi|153828033|ref|ZP_01980700.1| hutW protein [Vibrio cholerae 623-39]
 gi|148876442|gb|EDL74577.1| hutW protein [Vibrio cholerae 623-39]
          Length = 455

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q   E L   L+     G+     +  +      +  +      Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|260770036|ref|ZP_05878969.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
 gi|260615374|gb|EEX40560.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio
           furnissii CIP 102972]
          Length = 451

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 147/377 (38%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + +TE++    L   +S    +++ GG
Sbjct: 63  LYIHVPFCRVRCTFCNFFQNAASREL-VDGYFAALMTELRAKAALPWTQSGVFHAVYVGG 121

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  I  +   I   + +SS+ EIT+E   +      F    + G NR S GVQ
Sbjct: 122 GTPTDLSPAQIRQLGQAIRHYFPLSSDCEITLEGRTNRFSDEMFDHALEGGFNRFSFGVQ 181

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S      R   R       +  +  L+      +  DL+Y LP QT+  +E +L+  L  
Sbjct: 182 SFNTLVRRSAKRLDERETVLQRLSDLSATQQAPIVIDLLYGLPHQTLDVFEQDLRDYLQT 241

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      +Y L  +  + H L    +++ 
Sbjct: 242 GAHGVDLYQLVVGGSAPMLNLVEKGRLPPPATTPDKAAMYELGVNFFARHHLKPLSVNHW 301

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E S +N     Y   + I               ++   +   +++  V++    +
Sbjct: 302 ARDNRERSQYNSLAKTYAQVLPI----GCGAGGNVGGYSLMQHRQLPAYMDAVKRGETPI 357

Query: 316 VEKEFLSSEQQADEFLMMGLRL---REGISVKDWEML-AGRNLD--IECERNLQRQGFIE 369
                    Q A E +   L+       ++   ++ +  G + D       +  ++G + 
Sbjct: 358 AMM----FAQHALEPVFATLKAGFDAGVVARSAFQQIDGGDSFDRLKPLFAHWAQRGLVT 413

Query: 370 RVQFSRLRCTQRGMTML 386
               + L  T  G    
Sbjct: 414 N-DDAYLVLTLAGRFWS 429


>gi|153838952|ref|ZP_01991619.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus AQ3810]
 gi|149747586|gb|EDM58516.1| coproporphyrinogen III oxidase [Vibrio parahaemolyticus AQ3810]
          Length = 456

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 21/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    K+  + +  + + E++    L   +S    +++ GG
Sbjct: 65  LYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFAALMQELKEKAALPWTQSGIFHAVYIGG 123

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG    G NR S GVQ
Sbjct: 124 GTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGALDGGFNRFSFGVQ 183

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT    E +L   +S 
Sbjct: 184 SFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKEILEQDLNDFMST 243

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               L LYQL +        + + G +  P +      +Y L  +  + H +    +++ 
Sbjct: 244 GAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMAKHHMKQLSVNHW 303

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I                + + +  ++++K V +    +
Sbjct: 304 AVDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYGMMLHRTLDTYIKAVNEGQSTI 359

Query: 316 VEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGR---NLDIECERNLQRQGFIE 369
                 S      E L   L+    R  +      +  G    +  +   +  Q +G +E
Sbjct: 360 AMMMKHSP----LEPLFSALKSGFDRGIVQASKLPVFMGSDTFDFLMPMFKVWQGKGLVE 415

Query: 370 RVQFSRLRCTQRG 382
             + S L  T  G
Sbjct: 416 LQERS-LVLTLAG 427


>gi|312948445|gb|ADR29272.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 412

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 151/376 (40%), Gaps = 27/376 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  +C +C+  +         +N+I++ + + Q M+        +S   GGG
Sbjct: 41  HLYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAIIVQAQQMQ--LEAVDWASFTIGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    ++ +  G+     V +++   IE +PS          R+  VNR+S+GVQS
Sbjct: 99  TPLLLNVGQLSRLFRGVFDELQVDAHIFKAIETSPSDTTAEKVALLRQLAVNRVSIGVQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R H+A  A  A+ L     FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FNDLELATLHRRHSAENAHRALELLHRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L LY L                  +P +    +LY   +            +     
Sbjct: 219 PDELFLYPL----------------YNMPRQPDMYNLYIEARDRLLHECYTQTSMRRFVR 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS-IEKHPESWLKMV--RKNGHAV 315
           +  +S        + + + +G G  S +    +    S  +      +     R +   +
Sbjct: 263 VNNDSA--AESCGFENSLALGAGGRSYLGNLHYCTPWSQNQPASRQIVADFIDRPDKTLI 320

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
                LS  +    F++  L   +G+S+ D++     +   D     +  +Q +  + Q 
Sbjct: 321 SHGYVLSQAEMKRRFIIKNLFFYKGLSLSDYQHQFSSHALSDFPLLGDFIKQDYCHQ-QD 379

Query: 374 SRLRCTQRGMTMLDSV 389
           +R+  T +G+ + D +
Sbjct: 380 NRILLTAQGLALSDQL 395


>gi|315924152|ref|ZP_07920378.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622554|gb|EFV02509.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 512

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 25/310 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPR--SISSIF 75
           + VYV  P C  KC YC F S +   K     +++Q  ++E++ M      R   + +++
Sbjct: 188 VSVYVGIPICPAKCSYCSFVSTIADKKGVLCADYLQGLISEIRQMGAWMIKRQLRVDTLY 247

Query: 76  FGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
            GGGTPS++  + I  +L  + +     S   E T EA  P +         +  GV+R+
Sbjct: 248 IGGGTPSVLSVRQIERLLAALKESRLVHSKLREFTFEAGRPETTTPEKLAVLKAFGVDRL 307

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
            L  QS+  ++L  +GR H A++        R   F  ++ DLI  L ++T  Q+   L 
Sbjct: 308 CLNPQSMNNETLAAVGRFHTAADIERVYRQIRGVGFGCVNMDLIAGLNQETPAQFLTSLD 367

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           R ++   ++L+++ L I+KG+            L         Y+      +  G   Y 
Sbjct: 368 RVVAMRPENLTVHSLAIKKGSRMKAAGGHRYTQLYD----AAFYDQVHQKLAVAGYEPYY 423

Query: 252 -----------EISNHSFLGAESLHN-LNYWRYGDYIGIGPGAHSRVK--VGSHRVAISI 297
                      E   +   G   ++N L        IGIG G+  +V          +  
Sbjct: 424 MYRQKYAQGNGENIGYCLTGHPGIYNTLMMAEKQTIIGIGAGSSGKVYHAQTDRFNKVFT 483

Query: 298 EKHPESWLKM 307
            K   ++ + 
Sbjct: 484 VKDIRTYNQR 493


>gi|190150852|ref|YP_001969377.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189915983|gb|ACE62235.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 606

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 57  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIKELAYEASIRQGSGKIKAVYFGGGT 115

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 116 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 175

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 176 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 235

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 236 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 295

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 296 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 344

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 345 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 404

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 405 ARLNISGRYWSPTLIRKLML 424


>gi|254464128|ref|ZP_05077539.1| coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacterales
           bacterium Y4I]
 gi|206685036|gb|EDZ45518.1| coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacterales
           bacterium Y4I]
          Length = 372

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 134/366 (36%), Gaps = 28/366 (7%)

Query: 48  QENFIQSFLTEMQWMRQ-LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
              +++    E+  +RQ L    ++S + +GGGTP+L+  + I  +   +   + ++   
Sbjct: 1   MAAYVEVLKAEIALLRQQLPDGITLSRLHWGGGTPTLLSAEQIRDLAAAVTGAFPLAPYA 60

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           E ++E +P+ V         +AG+NR S+GVQ  +    + +GR  +      AI + R 
Sbjct: 61  EFSVEIDPNEVGDRRLDALAQAGMNRASVGVQDFDSTIQQAIGRIQSFETTKQAIDMLRA 120

Query: 167 IF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                ++ D+++ LP QT  +    +Q+ LS   D +++Y        +  +        
Sbjct: 121 HGVGSLNADILFGLPHQTPERMTESVQKLLSLTPDRVAVYGYAHVP-WMAGRQSMIRSDT 179

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD---- 274
           LP+    ++L+   + +    G     I + S                 N+  Y D    
Sbjct: 180 LPTPEARLELFETARQLFLWDGYREIGIDHFSRPADGLAIAQRSGRLRRNFQGYTDDPSD 239

Query: 275 -YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
             IGIG  A SR   G  + A         +++ +R    A         E      L+ 
Sbjct: 240 VLIGIGASAISRFPQGYAQNAPGTS----DYIRAIRAGQFATARGHTFQGEDLLRARLIE 295

Query: 334 GLRLREGISVKDWEMLAGRNLDIECERNLQRQ------GFIERVQFSRLRCTQRGMTMLD 387
            L     I  ++       ++       L R       G +E      L   +    +  
Sbjct: 296 ALMCDFRICREEILSRF--DVSPARLDALLRGTAEAFPGMLELSSAG-LVIKREARPLTR 352

Query: 388 SVIANL 393
            +  +L
Sbjct: 353 MIARSL 358


>gi|269962822|ref|ZP_06177162.1| hutW protein [Vibrio harveyi 1DA3]
 gi|269832376|gb|EEZ86495.1| hutW protein [Vibrio harveyi 1DA3]
          Length = 456

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 77/385 (20%), Positives = 154/385 (40%), Gaps = 21/385 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            + T   +N   +Y+H PFC  +C +C+F  +    K+  + +  + + E++    +   
Sbjct: 53  TSETTTKNNKRCLYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFDALMKELKEKAAMPWT 111

Query: 69  RS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           +S    +++ GGGTP+ + P+ + ++   I   + ++++ EIT+E   +      +QG  
Sbjct: 112 QSGIFHAVYIGGGTPTDLAPEQVRILGQAIHDYFPLAADCEITLEGRINRFSDELYQGAL 171

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
             G NR S GVQS   +  R   R  +  + +  +  LA+     +  DL+Y LP QT  
Sbjct: 172 DGGFNRFSFGVQSFNTKVRRSAKRLDDREDVLNRVSELAKEDKIPVIIDLLYGLPYQTKD 231

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITS 244
             E +L+  +S     L LYQL +        + + G +  P +      +Y L     +
Sbjct: 232 VLEQDLKDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKMPPPATTPEKAGMYELGAKFMA 291

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            H +    +++ +    E SL+N     Y + + +                +   +  ++
Sbjct: 292 EHHMKQLSVNHWAIDNRERSLYNSLAKTYAEVLPV----GCGAGGNIGGYGMMQHRTLDT 347

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGRN---LDIE 357
           ++K V +    +      S      E L   L+    R  +         G +     + 
Sbjct: 348 YVKAVNEGQSTIAMMMKQSP----LEPLFAALKSGFDRGIVQASKLPAFMGEDTFSFLMP 403

Query: 358 CERNLQRQGFIERVQFSRLRCTQRG 382
             +    +G +E  + S L  T  G
Sbjct: 404 LFKVWHDKGLVELQERS-LVLTLAG 427


>gi|254284539|ref|ZP_04959506.1| hutW protein [Vibrio cholerae AM-19226]
 gi|150425324|gb|EDN17100.1| hutW protein [Vibrio cholerae AM-19226]
          Length = 455

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPDQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGVDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|301167275|emb|CBW26857.1| oxygen-independent coproporphyrinogen III oxidase [Bacteriovorax
           marinus SJ]
          Length = 430

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 148/381 (38%), Gaps = 23/381 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             + +Y+H PFC   C +C  N  V R     +++I+  L E +  ++      ++SI+ 
Sbjct: 44  KKINLYIHIPFCASLCTFCGCNIKVTRSSDQFQSYIEKILEEWKLYKEEYPQIELASIYL 103

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+ +   NI  ++D I +          TIE +P  ++V   +     G N +S+G
Sbjct: 104 GGGTPTYLTLDNIKYLIDNILEGTKCDQTFFGTIETDPRLLQVEKLKYLSSVGFNALSIG 163

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ    ++L  + R+ +  +  A ++ AR   F  ++ DLIY LP QT+  +E  L   L
Sbjct: 164 VQDTNTETLANVNRHQSFDQVRALVNCARENGFSEINLDLIYGLPFQTLKSFEKSLNDVL 223

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   + ++ Y L           +  G           DLY  +  I  ++G     + +
Sbjct: 224 TLKPERIANYPLAKVP-WQMDLQNALGIYRPLGTEDMYDLYIHSDEILKSNGHRLLGMGH 282

Query: 256 HSFLGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
           +S    E  +N N   Y        I +G  + S       +    +EK+ +   ++V  
Sbjct: 283 YS--NQEKHYNRNITGYTSALNAPLIALGTSSISNTDQYLFQNDKILEKYHQYPNRIVTS 340

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR------ 364
           +             +   E +   +      S+ D       N + +    L R      
Sbjct: 341 HKKK--------KNEVILESIFQDINCNGTFSLLDLHNHHTVNSNEQKSETLIRHMNMLI 392

Query: 365 QGFIERVQFSRLRCTQRGMTM 385
           +  I   +    + T+ G   
Sbjct: 393 EYKILEHKNDVYKITELGKHF 413


>gi|315182560|gb|ADT89473.1| coproporphyrinogen III oxidase [Vibrio furnissii NCTC 11218]
          Length = 451

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 147/377 (38%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + +TE++    L   +S    +++ GG
Sbjct: 63  LYIHVPFCRVRCTFCNFFQNAASREL-VDGYFAALMTELRAKAALPWTQSGVFHAVYVGG 121

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  I  +   I   + +SS+ EIT+E   +      F    + G NR S GVQ
Sbjct: 122 GTPTDLSPAQIRQLGQAIRHYFPLSSDCEITLEGRTNRFSDEMFDHALEGGFNRFSFGVQ 181

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S      R   R       +  +  L+      +  DL+Y LP QT+  +E +L+  L  
Sbjct: 182 SFNTLVRRSAKRLDERETVLQRLSDLSATQQAPIVIDLLYGLPHQTLDVFEQDLRDYLQT 241

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      +Y L  +  + H L    +++ 
Sbjct: 242 GAHGVDLYQLVVGGSAPMLNLVEKGRLPPPATTPDKAAMYELGVNFFARHHLKPLSVNHW 301

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E S +N     Y   + I               ++   +   +++  V++    +
Sbjct: 302 ARDNRERSQYNSLAKTYAQVLPI----GCGSGGNVGGYSLMQHRQLPAYMDAVKRGETPI 357

Query: 316 VEKEFLSSEQQADEFLMMGLRL---REGISVKDWEML-AGRNLD--IECERNLQRQGFIE 369
                    Q A E +   L+       ++   ++ +  G + D       +  ++G + 
Sbjct: 358 AMM----FAQHALEPVFATLKAGFDAGVVARSAFQQIDGGDSFDRLKPLFAHWAQRGLVT 413

Query: 370 RVQFSRLRCTQRGMTML 386
               + L  T  G    
Sbjct: 414 N-DDAYLALTLAGRFWS 429


>gi|297580034|ref|ZP_06941961.1| hutW protein [Vibrio cholerae RC385]
 gi|297535680|gb|EFH74514.1| hutW protein [Vibrio cholerae RC385]
          Length = 455

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 78/377 (20%), Positives = 148/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +L   +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLHDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q   E L   L+     G+     +  +      +  +      Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDAGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|153801388|ref|ZP_01955974.1| hutW protein [Vibrio cholerae MZO-3]
 gi|124123054|gb|EAY41797.1| hutW protein [Vibrio cholerae MZO-3]
          Length = 455

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKSALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPDQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQQLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|303253399|ref|ZP_07339542.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302647744|gb|EFL77957.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 604

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 55  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIEELAYEASIRQGSGKIKAVYFGGGT 113

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 114 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 173

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 174 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 233

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 234 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 293

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 294 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 342

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 343 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 402

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 403 ARLNISGRYWSPTLIRKLML 422


>gi|165976952|ref|YP_001652545.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877053|gb|ABY70101.1| probable oxygen-independent coproporphyrinogen III oxidase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 605

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 5/261 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 56  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIKELAYEASIRQGSGKIKAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 115 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 175 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 235 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 294

Query: 260 --GAESLHNLNYWRYGDYIGI 278
             G  + +N         +  
Sbjct: 295 NRGERNRYNTLVKSNMPCLAF 315


>gi|307246440|ref|ZP_07528513.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250798|ref|ZP_07532727.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255423|ref|ZP_07537230.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259875|ref|ZP_07541589.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307264202|ref|ZP_07545793.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306852644|gb|EFM84876.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857157|gb|EFM89284.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861607|gb|EFM93594.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866045|gb|EFM97919.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306870448|gb|EFN02201.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 620

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 71  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIKELAYEASIRQGSGKIKAVYFGGGT 129

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 130 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 189

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 190 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 249

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 250 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 309

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 310 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 358

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 359 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 418

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 419 ARLNISGRYWSPTLIRKLML 438


>gi|303250941|ref|ZP_07337131.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650213|gb|EFL80379.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 605

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 56  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIEELAYEASIRQGSGKIKAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 115 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 175 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 235 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 294

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 295 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 343

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 344 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 403

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 404 ARLNISGRYWSPTLIRKLML 423


>gi|289450473|ref|YP_003475007.1| coproporphyrinogen dehydrogenase HemZ [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289185020|gb|ADC91445.1| coproporphyrinogen dehydrogenase HemZ [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 552

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 21/320 (6%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           +     ++ GVY+  PFC  +C YC F+++  +         +I +   E++       P
Sbjct: 212 LRQLPPDTCGVYIAIPFCPTRCLYCSFSTNEGIDPPNDLINRYIDALSEEIELTFAQL-P 270

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
             IS+++ GGGTP ++  + IA +   I +N       E+T EA  P  V+        +
Sbjct: 271 FKISTLYVGGGTPGILSAEQIARLGQIIHRNIEFIPGAELTFEAGRPDRVDQPALSAVYE 330

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQ 186
           AG  +I L  Q+  +++L  + R H   + I+   +AR + F  ++ DLI  LP +T   
Sbjct: 331 AGFQKICLNPQTFHDRTLALVNRQHTVEQLISTYEMARRMPFTNINMDLILGLPGETEAD 390

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDL--YNLTQSIT 243
               L++  S A D  +L+ L I++ +    +     D+        V        +++ 
Sbjct: 391 MRYTLKKLESLAPDSFTLHSLAIKRASNLKLQAEDWLDVGAVHRRNKVLESLQEEGRALA 450

Query: 244 SAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGS 290
           +   L  Y            E   ++  G  + +NL     G   +  G GA S+   G 
Sbjct: 451 NRLWLVPYYMYRQKDGVGGLENLGYARPGCGNRYNLAMMGDGLSILSFGAGAMSKAVSGD 510

Query: 291 HRVAISIEKHPESWLKMVRK 310
                   +  +++++  R+
Sbjct: 511 KVERSPNVRSIQAYIERHRE 530


>gi|307253174|ref|ZP_07535052.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859359|gb|EFM91394.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 607

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 58  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIEELAYEASIRQGSGKIKAVYFGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 117 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 176

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 177 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 236

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 237 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 296

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 297 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 345

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 346 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 405

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 406 ARLNISGRYWSPTLIRKLML 425


>gi|261380907|ref|ZP_05985480.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
 gi|284796156|gb|EFC51503.1| putative oxygen independent coproporphyrinogen III oxidase
           [Neisseria subflava NJ9703]
          Length = 606

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 5/260 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           Y+H PFC   C +C F  +  +       +    + EM    ++ TG   I +++FGGGT
Sbjct: 56  YLHIPFCANHCVFCGFYRNAWKDSQSSV-YTDKIIEEMAAEAEVRTGKGKIRAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GVQ+ 
Sbjct: 115 PTALLTEDLVRLICACYQYLPLAEDCEFTIEGRMSHFDLEKAQACLEAGANRISIGVQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R LGR H+  EA   +     +   +  DL++ LP QT   W+ ++ RA    + 
Sbjct: 175 NTAIRRRLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDEVWQNDIARAAELPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKD-GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y   +       +M +       P  ++  D Y  T       G      S+ ++ 
Sbjct: 235 GLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWEHVSNSHFAYP 294

Query: 260 GA--ESLHNLNYWRYGDYIG 277
           G    + +N         + 
Sbjct: 295 GRGERNRYNTLIKSDIPCLA 314


>gi|126208987|ref|YP_001054212.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           L20]
 gi|126097779|gb|ABN74607.1| coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 605

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 147/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 56  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIKELAYEASIRQGSGKIKAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 115 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 175 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 235 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAIEHLQNTGWQQVSNNHFAFP 294

Query: 260 GA--ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                + +N         +       S         +  +    +++L           +
Sbjct: 295 NRRERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 343

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 344 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 403

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 404 ARLNISGRYWSPTLIRKLML 423


>gi|332969710|gb|EGK08724.1| oxygen-independent coproporphyrinogen III oxidase [Kingella kingae
           ATCC 23330]
          Length = 607

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/359 (20%), Positives = 142/359 (39%), Gaps = 14/359 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  +  +    +    + E++   ++ TG   I +++FGGGT
Sbjct: 56  YVHIPFCANHCVFCGFYRNAWKDDIS-AGYTDRVIAELKREAEIRTGSGKIQAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++A +++   +   ++ + E T+E   S  +    Q    AGVNRIS+GVQ+ 
Sbjct: 115 PTALHSRDLARLVEACYRYLPLADDCEFTLEGRMSHFDDEKIQAAISAGVNRISIGVQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +    R LGR H+  EA A +    +       DLI+ LP QT   W+ ++  A    + 
Sbjct: 175 DTTIRRRLGRKHSGDEARAYLEKLCSYDVITVADLIFGLPAQTDKIWQNDIAIASQLPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y           +M + G    P   +     Y    +     G +    ++ ++ 
Sbjct: 235 GLDTYAFNCYPFLPINRMIEKGAFPKPLGFDQQSQQYAYAVAELERLGWNQVSNNHFAYP 294

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S        ++  ++   +++L            
Sbjct: 295 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGLSYQVQNDLQAYL----SGSLHEKS 346

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL 376
             FLS      E ++  ++    +   D ++ +G +   +  +  Q    +E    S +
Sbjct: 347 LSFLSKHSPQKE-ILGVVQHDIELGFLDTKLFSGSDEAQKLLQQWQSLSLLEIDDKSGI 404


>gi|269122671|ref|YP_003310848.1| coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
 gi|268616549|gb|ACZ10917.1| Coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
          Length = 468

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 69/313 (22%), Positives = 146/313 (46%), Gaps = 18/313 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTG--PRSI 71
           + ++G+Y+   +C  +C YC F S+++  +Y    E +  + L E++ + +L       +
Sbjct: 140 NRTIGIYIGIAYCPSRCSYCSFPSYLKEGKYLERFEEYYNTLLYEIREIGKLVKELGLEV 199

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGV 130
           ++I+ GGGTPS++  + +  +L  I +N+ +    E + E     +++    +  +   V
Sbjct: 200 NTIYVGGGTPSILSKEEMEKMLRVINQNYDIGKLKEFSYELGRIDTIDEEKLEVLKNWNV 259

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           +RIS+  Q+   ++L+ + R H+  +     + A+ +   ++ DLI  LP +T       
Sbjct: 260 DRISINPQTFNMKTLKEVNRYHDQEKFDRIFNEAKRMGFIVNMDLILGLPGETTDDILYT 319

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS--------I 242
           LQ+A +Y +D+L+++ L I+K +   K +      L  + +  ++Y +T+          
Sbjct: 320 LQKAGTYNMDNLTIHNLAIKKTSGLNKDNYLLAKNLNYKKIYGNIYKITREKGLYPYYMY 379

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAI----SI 297
              +     E   +S    ES++N+         IGIG GA +++  G  R         
Sbjct: 380 RQKNSFEWGENIGYSLQDKESVYNIETIEENKTIIGIGAGAVTKLITGDIRNRTIERLIN 439

Query: 298 EKHPESWLKMVRK 310
            K P  W+  + +
Sbjct: 440 PKDPLMWIDELEE 452


>gi|118580893|ref|YP_902143.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118503603|gb|ABL00086.1| coproporphyrinogen III oxidase, anaerobic [Pelobacter propionicus
           DSM 2379]
          Length = 453

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 73/383 (19%), Positives = 153/383 (39%), Gaps = 18/383 (4%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQL 65
            +  +       L +Y+H PFC  +C +C  NS   +     Q+ +++  + +++   +L
Sbjct: 46  IDTVVAAMVETELLLYIHLPFCFSECLFC--NSFPHKVDTQVQQEYLRRLILQIELYERL 103

Query: 66  --TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN-NF 122
                +    I FGGGTP+      I  ++D +    T++ +  I  EA+P+++E     
Sbjct: 104 GLFKGKKAKCICFGGGTPTAFANSEIRKVMDTVRACVTLTDDCSIATEAHPATMEHEARV 163

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
                 G NRIS+G Q+ + Q L+   RN+  S+    +   +     ++ D++  LP Q
Sbjct: 164 LDLADMGFNRISMGCQTFDPQILQLCNRNNTPSQVQGIVQTVQRAGMMINIDMMTGLPGQ 223

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++   + +L+       D +   +  I    L  +++     ++  ++   D+  + Q  
Sbjct: 224 SIESVQADLRMLEQIRPDAVEYIRHEIVNP-LIARLYTQRPELIVPDDTLFDMVFMAQE- 281

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE 302
                   YE +       +  +  ++ R    I  G    S        +     +   
Sbjct: 282 --WMDGQGYEQNGRFSCDRQWPYRYHWLRETPIISFGIRTRSYSPA----ICFDSHEELA 335

Query: 303 SWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR---NLDIECE 359
           S+ ++V K    V     LS  ++    L++ L+L+ G+ +  +    G    ++     
Sbjct: 336 SFNRLVDKGIPPVGRYIMLSRRERMYRRLILSLQLKGGLDISRFHASFGESPLDVFSPLV 395

Query: 360 RNLQRQGFIERVQFSRLRCTQRG 382
             L   G + +   S LR T+ G
Sbjct: 396 SKLADLGCLCQEDES-LRLTRLG 417


>gi|46143530|ref|ZP_00135019.2| COG0635: Coproporphyrinogen III oxidase and related Fe-S
           oxidoreductases [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
          Length = 606

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/380 (19%), Positives = 147/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 57  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIKELAYEASIRQGSGKIKAVYFGGGT 115

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 116 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 175

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 176 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 235

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 236 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAIEHLQNTGWQQVSNNHFAFP 295

Query: 260 GA--ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                + +N         +       S         +  +    +++L           +
Sbjct: 296 NRRERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 344

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 345 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 404

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 405 ARLNISGRYWSPTLIRKLML 424


>gi|315927317|gb|EFV06661.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 252

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 113/258 (43%), Gaps = 17/258 (6%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGG 79
           Y+H PFC  KC YC F S   +    ++ + ++   ++  Q  +       I ++F GGG
Sbjct: 4   YIHIPFCESKCNYCAFTS--LKKNDYEKAYFKALKEDIVFQLKQFNIQSNQIKTLFIGGG 61

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   N   I   +     +  NVEI+ EANP+S  +N  +  +  GVNRIS GVQS
Sbjct: 62  TPSCVNAYNYEDIFKILYPL--LDKNVEISCEANPNSATLNWLKNMKNLGVNRISFGVQS 119

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              + L FLGR HN    I  +  A    F  ++ DLIY          E EL       
Sbjct: 120 FHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDTKLDNKKMLEFELLHLKQIK 179

Query: 199 --VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + HLS Y LTIE  T F K            N    +    + +        YEISN 
Sbjct: 180 DLITHLSAYNLTIESNTAFAKKEHFKK------NAPNLMKFFIKQLLELDFF-QYEISNF 232

Query: 257 SFLGAE-SLHNLNYWRYG 273
           S   A+   HNL YW+  
Sbjct: 233 SKTKAQICKHNLAYWQGK 250


>gi|307262005|ref|ZP_07543660.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306868288|gb|EFN00110.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 620

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 71  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIEELAYEASIRQGSGKIKAVYFGGGT 129

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 130 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 189

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 190 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 249

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 250 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 309

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 310 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 358

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 359 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 418

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 419 ARLNISGRYWSPTLIRKLML 438


>gi|307248565|ref|ZP_07530580.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306854915|gb|EFM87103.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 619

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 70  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIEELAYEASIRQGSGKIKAVYFGGGT 128

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 129 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 188

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 189 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 248

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 249 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 308

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 309 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 357

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 358 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 417

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 418 ARLNISGRYWSPTLIRKLML 437


>gi|262164455|ref|ZP_06032193.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
 gi|262026835|gb|EEY45502.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           VM223]
          Length = 484

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 147/377 (38%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 95  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALMEELKQKAALPWTQTGVFHAVYIGG 153

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 154 GTPTELSPQQIRQLGRTIRHSFPLTADCEITLEGRINRFSDKMFDQALEGGFNRFSFGVQ 213

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +       I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 214 SFNTQVRRRAKRLDDREVVTERIAALAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMDT 273

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        +   G L  P +      LY +     + H L    +++ 
Sbjct: 274 GAQGIDLYQLMVGGSAPMLNLVDKGKLPPPATTPDKATLYQIGVEFMAKHHLRPVSVNHW 333

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               +I   +   ++L  ++     V
Sbjct: 334 ARDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYSIMQHRQLSTYLDAMQNGQPLV 389

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q A E L   L+     G+     +  +   +  +  +      Q  G +E
Sbjct: 390 AMM----ARQHACEPLFAALKSGFDSGVVAKQRLPKFNHHSTFDWLMPLFLRWQSLGLVE 445

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 446 -VEHEYLTLTTAGRFWS 461


>gi|90423477|ref|YP_531847.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB18]
 gi|90105491|gb|ABD87528.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB18]
          Length = 471

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 70/282 (24%), Positives = 114/282 (40%), Gaps = 6/282 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGG 79
           Y+H P+C   C +C F  +V R +V  E F+   + E+       L     I +++ GGG
Sbjct: 85  YIHMPYCQNHCLFCGFFQNVWRPEVA-EPFVDDVIAEIAAKAATPLVASAPIEAVYIGGG 143

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +  Q +  ++  + +   ++ + EIT+E       V       +AG  RISLGVQ+
Sbjct: 144 TPSALPDQQLVRLIGSLRQLLPLTPDCEITLEGRSHGFGVAKAAAVLEAGATRISLGVQT 203

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                 R LGR  +  E  + +     +    +  DLIY LP Q    W  ++  A +  
Sbjct: 204 FSTAVRRRLGRKQSGPEVASFLEDLVGLGRASIVCDLIYGLPGQDHDGWLRDIDIANAVG 263

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHAYEISNHS 257
           +D ++LY L +  G       + G L   +   A    Y          G      S+  
Sbjct: 264 LDGVTLYALNLFPGGPLATAIEHGKLPPAANIAAQARDYAAGVDRLLGFGWRQAYQSHLI 323

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
               E + +N    +    +  GPGA  +      R  I +E
Sbjct: 324 RSPHEQNRYNALIKQGSACLPFGPGAGGQAHGYRWRNVIDVE 365


>gi|168187501|ref|ZP_02622136.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum C str. Eklund]
 gi|169294596|gb|EDS76729.1| oxygen-independent coproporphyrinogen III oxidase 2 [Clostridium
           botulinum C str. Eklund]
          Length = 480

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 67/325 (20%), Positives = 137/325 (42%), Gaps = 23/325 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQ 60
           ++  E     +   ++ +Y+  PFC   C YC F S+    R      E +++    E+ 
Sbjct: 136 IAKAERARVNKEPKNISIYIGMPFCPTTCLYCSFASNPIGGRNTSKMVEPYLEKLNEEID 195

Query: 61  WMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSS 116
            +++    R   I  ++FGGGTP+ +       ++  + +++     V E  +E   P S
Sbjct: 196 IIKEFIDKRELNIECVYFGGGTPTSVNENQFENLIKKVHESFISGRKVKEFNVECGRPDS 255

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDL 175
           +     +  +K  V+RIS+  Q++ E +L+ +GR+H   +      LAR   F  ++ D+
Sbjct: 256 ITEGKLKTMKKYNVSRISINPQTMNEDTLKLIGRHHTVKDISEKFKLARKLGFDNINMDI 315

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I  LP +T++  E      L    D L+++ ++I++G+  Y+      + +  +N   ++
Sbjct: 316 IVGLPNETLSHIETTCTEILKLNPDSLTVHGMSIKRGSKLYEEIYIDKVRILEQNSLNEM 375

Query: 236 YNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGA 282
           Y  T  +     +  Y            E   +   G E L+N+         I +G  A
Sbjct: 376 YKRTSKLAEELNMKPYYMYRQKNMVGHMENVGYCRHGKEGLYNIEMIEDKQTIIALGADA 435

Query: 283 HSRVKV--GSHRVAISIEKHPESWL 305
            ++V     +        K  + ++
Sbjct: 436 VTKVVYLKNNKIERFGNLKDVKEYI 460


>gi|8671347|emb|CAB95030.1| oxygen independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus]
          Length = 294

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 88/281 (31%), Positives = 137/281 (48%), Gaps = 24/281 (8%)

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-----PRMSFDLIYALPKQTMTQWE 188
           SLG QS +++ L  LGR H A++ + A       F        S DLI  LP Q +  WE
Sbjct: 4   SLGAQSFDDKVLAQLGRRHTANDLLDACGWINQAFNERKLFSWSLDLIQNLPGQDLCSWE 63

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L +AL  +  H+S+Y L+IEKGT+F      G+L LP+E+ A D+  +T       G 
Sbjct: 64  KQLLKALDISPPHMSIYDLSIEKGTVFEWRQNRGELSLPNEDDASDMSKMTSDKLKQAGF 123

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN++  G  S HN  YW    + G G GA S           + EK+ + WL++ 
Sbjct: 124 SRYEISNYALPGHASRHNRVYWSGSGWWGFGQGATSCPWGVRSSRPRTREKY-KKWLEVQ 182

Query: 309 RKNGHAVVEKEFLSSEQQ---ADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL--- 362
             +G  + +   L++E Q    DE L+ GLR REGI  K+       + + + E NL   
Sbjct: 183 ENDG--LDKSLTLNNEGQLIPLDELLIFGLRRREGIDFKELVSSFNWD-ESQLEINLNNL 239

Query: 363 -------QRQGFIERVQFSRLRCT-QRGMTMLDSVIANLAV 395
                   ++G I++  + R   T   GM + + ++ ++ +
Sbjct: 240 KNYWANSLKEGLIKQRGY-RFYLTDPHGMDLSNQILVDMLL 279


>gi|145298845|ref|YP_001141686.1| coproporphyrinogen III oxidase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851617|gb|ABO89938.1| coproporphyrinogen III oxidase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 455

 Score =  188 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 141/377 (37%), Gaps = 14/377 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRS 70
           G  ++   +Y+H PFC K+C +C+F  +          ++ +    +       L   R 
Sbjct: 52  GSQADERALYIHVPFCRKRCSFCNFFEN-GANPARMSRYMAALCDSLNRAADTPLAQSRP 110

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            S+++ GGGTP+ +  +++A +   I + + ++ + E+T+E   +  +   +Q     G 
Sbjct: 111 FSAVYVGGGTPTDMALEDLARLARAI-QRFPLTLDAEVTLEGRLNGFDDAKWQTALAGGF 169

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR S GVQS + +  +   R  +    +A +  L ++    +  DLI+ LP Q    W  
Sbjct: 170 NRFSFGVQSFDTRVRQQAARFDDRQTLLARLGELTQDDAAVIVADLIFGLPGQDDEVWRQ 229

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGL 248
           ++   ++  V  + LYQL    GT   +    G L           +Y          G 
Sbjct: 230 DIADVMASGVHGVDLYQLIPMAGTNLERAEASGKLGWAADGQQRAAMYAYGAQTLEQGGW 289

Query: 249 HAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
                S+     AE S +N    R  + +  G GA   V          +    E+    
Sbjct: 290 QRLSCSHWRRDDAEQSRYNQMAKRGAEILPFGAGAGGSVHGHGLMYGRDLALWHEALAGG 349

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF 367
           VR  G  V+ +   +         +   RL   +      + A     +   +  Q  G 
Sbjct: 350 VRAPGM-VMGQNPNAPMDGLLRGALDSGRLT--LDRLPVPLRAHL---LPLFQAWQLHGL 403

Query: 368 IERVQFSRLRCTQRGMT 384
           +   +  +L  T  G  
Sbjct: 404 VALTE-DKLVLTLAGRF 419


>gi|258622568|ref|ZP_05717590.1| hutW protein [Vibrio mimicus VM573]
 gi|258585268|gb|EEW09995.1| hutW protein [Vibrio mimicus VM573]
          Length = 468

 Score =  188 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 148/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 79  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALMEELKQKAALPWTQTGVFHAVYIGG 137

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 138 GTPTELSPQQIRQLGRAIRHSFPLTADCEITLEGRINRFSDKMFDQALEGGFNRFSFGVQ 197

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    I  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 198 SFNTQVRRRAKRLDDREVVIERIAALAATQQAPIVIDLLYGLPYQTSQVFEQDLQDFMDT 257

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 258 GAQGIDLYQLMVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPVSVNHW 317

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               +I   +   ++L  ++     V
Sbjct: 318 ARDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYSIMQHRQLSTYLDAMQNGQPLV 373

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q   E L   L+     G+     +  +   +  +  +      Q  G +E
Sbjct: 374 AMM----ARQHECEPLFAALKSGFDSGVVAKQRLPKFNHHSTFDWLMPLFLRWQSVGLVE 429

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 430 -VEHEYLTLTTAGRFWS 445


>gi|228907630|ref|ZP_04071487.1| hypothetical protein bthur0013_17970 [Bacillus thuringiensis IBL
           200]
 gi|228852122|gb|EEM96919.1| hypothetical protein bthur0013_17970 [Bacillus thuringiensis IBL
           200]
          Length = 450

 Score =  188 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 69/333 (20%), Positives = 131/333 (39%), Gaps = 14/333 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSI 71
           Q      +Y+H PFC   C +C F     +Y+     +++  + EM+ +    +    + 
Sbjct: 42  QKKGKTALYLHIPFCDTICSFCPFIKST-KYEPIIGEYVECLIKEMELLSSSPVIQALTF 100

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             IF GGGTPS++ P  I  +   I KN+ +S + E T E    + +          G N
Sbjct: 101 DVIFVGGGTPSVLTPTLIEKLTTAINKNFKLSPDYEWTFECEAKTADEERIAAMAAGGAN 160

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R S GVQ+L  +  +      +  +    +   +  F   + DL+Y LP Q+  +   +L
Sbjct: 161 RGSFGVQTLNPKYRKLFNLTSSYEQIQHTVETMKRYFKSYNLDLLYQLPGQSEKELIDDL 220

Query: 192 QRALSYAVDHLSLYQLTIEKGT--LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              +      +  Y L     +     K+ K      P+    +    +T       G +
Sbjct: 221 NAVMELGTTSIDAYPLEYIACSKGWLNKITKGSIPRPPTPAEKIKYNRITYDHFRNSGWN 280

Query: 250 AYEISNHSFLGAESL----HNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKHPESW 304
              +      G E        + Y  Y D  IG+G GA + ++     +  + E + + +
Sbjct: 281 QKYVYTFMAPGHEEKRFKYGEIIYGGYEDQCIGLGTGAVTYMQG----ITWANEGNTQKY 336

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
           ++ ++++G AV +     +  +   F    +RL
Sbjct: 337 IEQIKEHGLAVAKSRLYHAYDRRFIFFPKTMRL 369


>gi|262173432|ref|ZP_06041109.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
 gi|261890790|gb|EEY36777.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio mimicus
           MB-451]
          Length = 453

 Score =  188 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 82/377 (21%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDVYFAALMEELKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 123 GTPTELSPQQIRQLGRAIRHSFPLTADCEITLEGRINRFSDEMFDQALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    I  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVIERIAALAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMDT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 243 GAQGIDLYQLMVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVKFMAKHHLRPVSVNHW 302

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               +I   +   ++L  ++     V
Sbjct: 303 ARDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYSIMQHRQLSTYLDAMQNGQPLV 358

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q A E L   L+     G+     +  +   +  +  +      Q  G +E
Sbjct: 359 AMM----ARQHACEPLFAALKSGFDSGVVAKQRLPKFNHHSTFDWLMPLFLRWQSVGLVE 414

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 415 -VEHEYLTLTTAGRFWS 430


>gi|156976472|ref|YP_001447378.1| coproporphyrinogen III oxidase [Vibrio harveyi ATCC BAA-1116]
 gi|156528066|gb|ABU73151.1| hypothetical protein VIBHAR_05245 [Vibrio harveyi ATCC BAA-1116]
          Length = 456

 Score =  188 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 78/385 (20%), Positives = 155/385 (40%), Gaps = 21/385 (5%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            + T   +N   +Y+H PFC  +C +C+F  +    K+  + +  + + E++    +   
Sbjct: 53  TSETTTKNNKRCLYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFDALMKELKEKAAMPWT 111

Query: 69  RS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           +S    +++ GGGTP+ + P+ + ++   I   + ++++ EIT+E   +      +QG  
Sbjct: 112 QSGIFHAVYIGGGTPTDLAPEQVRILGQAIHDYFPLAADCEITLEGRINRFSDELYQGAL 171

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
             G NR S GVQS   +  R   R  +  + +  +  LA+     +  DL+Y LP QT  
Sbjct: 172 DGGFNRFSFGVQSFNTKVRRSAKRLDDREDVLNRVSELAKEDKIPVIIDLLYGLPYQTKD 231

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITS 244
             E +L+  +S     L LYQL +        + + G +  P +      +Y L     +
Sbjct: 232 VLEQDLKDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKMSPPATTPEKAGMYELGAKFMA 291

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
            H +    +++ +    E SL+N     Y + + +                +   +  ++
Sbjct: 292 EHHMKQLSVNHWAIDNRERSLYNSLAKTYAEVLPV----GCGAGGNIGGYGMMQHRTLDT 347

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGRN---LDIE 357
           ++K V +    +      SS     E L   L+    R  +         G +     + 
Sbjct: 348 YVKAVNEGQSTIAMMMKQSS----LEPLFAALKSGFDRGIVQASKLPAFMGEDTFNFLMP 403

Query: 358 CERNLQRQGFIERVQFSRLRCTQRG 382
             +    +G +E  + S L  T  G
Sbjct: 404 LFKVWHDKGLVELQERS-LVLTLAG 427


>gi|255746344|ref|ZP_05420291.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholera CIRS 101]
 gi|262158301|ref|ZP_06029418.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
 gi|255736098|gb|EET91496.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholera CIRS 101]
 gi|262029983|gb|EEY48630.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio cholerae
           INDRE 91/1]
          Length = 453

 Score =  188 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 147/380 (38%), Gaps = 27/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 243 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 302

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 303 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 358

Query: 316 ---VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQG 366
                +            L   L+     G+     +  +      +  +      Q+ G
Sbjct: 359 AMMARQHEYDP-------LFAALKAGFDAGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIG 411

Query: 367 FIERVQFSRLRCTQRGMTML 386
            +E V+   L  T  G    
Sbjct: 412 LVE-VEQDYLTLTTAGRFWS 430


>gi|313608738|gb|EFR84560.1| coproporphyrinogen dehydrogenase [Listeria monocytogenes FSL
           F2-208]
          Length = 203

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 8/208 (3%)

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L++AL   + H S Y L IE  T+FY + + G L LP ++   ++Y+L  +    HG  
Sbjct: 1   TLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLFLPGQDAEANMYDLLLNEMEKHGRK 60

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            YEISN +  G +S HN+ YW    Y G G GAH  V    +     I+K    +++ ++
Sbjct: 61  QYEISNFAKDGFQSKHNITYWSNEHYYGFGAGAHGYVGNTRYSNFGPIKK----YMEPLQ 116

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QG 366
           KN     +++ L+ +++ +E + +GLR  +G++   ++   G++LD      +Q+   +G
Sbjct: 117 KNILPTFQQKELTLKEKMEEEMFLGLRKVDGVNKNHFKQKFGQDLDTTFANAIQKTTAKG 176

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
           ++E  + + +  T+ G  + ++V     
Sbjct: 177 WLENNEEN-VALTRNGRFLGNNVFQEFL 203


>gi|149191989|ref|ZP_01870218.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
 gi|148834167|gb|EDL51175.1| coproporphyrinogen III oxidase [Vibrio shilonii AK1]
          Length = 473

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 148/383 (38%), Gaps = 27/383 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--I 71
             +N   +Y+H PFC  +C +C+F  +    ++  +++ ++ L E++   +L   +S   
Sbjct: 58  SKANKRCLYIHIPFCRVRCTFCNFFQNAASRQL-VDDYFEALLKEIEIKSRLAWTQSGLF 116

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTP+ + P  + ++   I  ++ +S++ EIT+E   +      F    + G N
Sbjct: 117 HAVYIGGGTPTDLSPDQVEILGKTIRSSFPLSTDCEITLEGRTNRFTDEMFDKALEGGFN 176

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEME 190
           R S G+QS + +  R   R  +    +  +          +  DL+Y LP QT+  +E +
Sbjct: 177 RFSFGIQSFDTKVRRSAKRLDDREVVLERVAALSARDEAPIIIDLLYGLPYQTLDVFEQD 236

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLH 249
           LQ  L        LYQL +        M + G +  P +      +Y    +    H + 
Sbjct: 237 LQDFLDTGAHGADLYQLVVGGSAPMLNMVEKGRIPAPATTPDKASMYERGVAFMDKHHIK 296

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
              +++ +    E S +N     Y + + I                +   +  ++++  +
Sbjct: 297 QLSVNHWARDNRERSQYNSLAKTYAEVLPI----GCGAGGNIGGYGLMHHRSLDAYMDAM 352

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS-----VKDWEMLAGRNLDIECERNL- 362
           +     +         +  +        L+ G               G++   E  + L 
Sbjct: 353 KSGRSTIAMMVKQGPTESIN------AALKAGFDSGVVRRSALPSFKGQD-TFELLKPLF 405

Query: 363 ---QRQGFIERVQFSRLRCTQRG 382
               + G +E ++   L  T  G
Sbjct: 406 AIWSKNGLVE-LEQDYLVLTLAG 427


>gi|15601663|ref|NP_233294.1| coproporphyrinogen III oxidase [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|153823488|ref|ZP_01976155.1| hutW protein [Vibrio cholerae B33]
 gi|229510200|ref|ZP_04399680.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae B33]
 gi|229605478|ref|YP_002876182.1| coproporphyrinogen III oxidase [Vibrio cholerae MJ-1236]
 gi|254850074|ref|ZP_05239424.1| hutW protein [Vibrio cholerae MO10]
 gi|9658344|gb|AAF96806.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|126519002|gb|EAZ76225.1| hutW protein [Vibrio cholerae B33]
 gi|229352645|gb|EEO17585.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae B33]
 gi|229371964|gb|ACQ62386.1| coproporphyrinogen III oxidase oxygen-independent associated with
           heme uptak-like eradical SAM family protein HutW [Vibrio
           cholerae MJ-1236]
 gi|254845779|gb|EET24193.1| hutW protein [Vibrio cholerae MO10]
          Length = 455

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 147/380 (38%), Gaps = 27/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 ---VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQG 366
                +            L   L+     G+     +  +      +  +      Q+ G
Sbjct: 361 AMMARQHEYDP-------LFAALKAGFDAGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIG 413

Query: 367 FIERVQFSRLRCTQRGMTML 386
            +E V+   L  T  G    
Sbjct: 414 LVE-VEQDYLTLTTAGRFWS 432


>gi|327438744|dbj|BAK15109.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046]
          Length = 500

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/312 (21%), Positives = 130/312 (41%), Gaps = 25/312 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHV---RRYKVGQENFIQSFLTEMQWMRQLT--GPRSI 71
             + +Y+  PFC   C YC F ++     R     E FI     E++ M +        I
Sbjct: 172 KEISIYIGVPFCPTMCAYCTFPAYAIQSNRKAGRVEKFIDGLHIELREMGKWLTEKNMRI 231

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           +SI++GGGTP+ IE   +  +   +        S  EIT+EA  P ++     +  +K G
Sbjct: 232 TSIYWGGGTPTSIEAHEMDALYKTMFDAFPNPESIREITVEAGRPDTITPEKIEVLKKWG 291

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWE 188
           ++RIS+  QS  +++L+ +GR+H   E +    L   +    ++ DLI  LP + + ++E
Sbjct: 292 IDRISVNPQSYTQETLKAIGRHHTVEETVEKFWLSRNSGMNNINMDLIIGLPNEGIEEFE 351

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L  +     + L+++ L+ ++ +   +        +   +    +  +    T+ +G 
Sbjct: 352 HSLAESAKMQPESLTVHTLSFKRASEMTR--NKDKYKVADRDTVGKMMQMATDWTAENGY 409

Query: 249 HAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRV--KVGSHRV 293
             Y            E   +     ES++N+         +GIG GA S+          
Sbjct: 410 VPYYLYRQKNILGNLENVGYCKPEEESIYNIVIMEEVQTILGIGCGASSKFVHPTTGKIT 469

Query: 294 AISIEKHPESWL 305
                K P +++
Sbjct: 470 QFHNPKDPAAYI 481


>gi|229514325|ref|ZP_04403786.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TMA 21]
 gi|229348305|gb|EEO13263.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae TMA 21]
          Length = 455

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/377 (22%), Positives = 152/377 (40%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   +S    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQSGLFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  + + I  ++ +S++ EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPQQIRTLGETIRGSFPLSTDCEITLEGRIHRFSDEMFEQALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT T +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTATVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q   E L   L+     G+  K        +   +  + L    Q+ G +E
Sbjct: 361 AMM----ARQHEYEPLFAALKAGFDSGVIAKQRLPKFYHHQTFDWLKPLFLRWQQIGLVE 416

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 417 -VEQDYLTLTTAGRFWS 432


>gi|84385281|ref|ZP_00988313.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
 gi|84379878|gb|EAP96729.1| coproporphyrinogen III oxidase [Vibrio splendidus 12B01]
          Length = 469

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/322 (19%), Positives = 139/322 (43%), Gaps = 12/322 (3%)

Query: 2   KYLSAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           K L  ++  M   G+  +   +Y+H PFC  +C +C+F  +    K+  + +  + + E+
Sbjct: 44  KKLELFDELMLSEGKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDEYFDALMVEL 102

Query: 60  QWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +   +    +S    +++ GGGTP+ + PQ +  +   I + + ++++VE+T+E   +  
Sbjct: 103 KQKAKTPWAQSGLFHAVYIGGGTPTDLSPQQVEQLGKAIRQYFPLANDVEMTLEGRINRF 162

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLI 176
               F    + G NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+
Sbjct: 163 GDEMFDRALEGGFNRFSFGIQSFNTQVRRSAKRLDDREVVLERISSLSRTEQAPIVLDLL 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDL 235
           Y LP Q+M  ++ +L+  +S     + LYQL +        + + G +  P +      +
Sbjct: 223 YGLPHQSMEVFQQDLEDYMSTGAHGIDLYQLIVSGNAPMLNLVEKGKIPPPANTPDKASM 282

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           Y       + + +    +++ +    E S++N     Y + + I                
Sbjct: 283 YLAGVEFMAKNKVKQLSVNHWTRGNRERSIYNSLAKTYAEVLPI----GCGAGGNIGGHG 338

Query: 295 ISIEKHPESWLKMVRKNGHAVV 316
           +   +  +S+++ +++    + 
Sbjct: 339 VMQHRTLDSYMESIKQGQLPIA 360


>gi|13357834|ref|NP_078108.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762029|ref|YP_001752357.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920508|ref|ZP_02931796.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508683|ref|ZP_02958175.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701936|ref|ZP_02971580.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|11356998|pir||F82911 oxygen-independent coproporphyrinogen III oxidase UU274 [imported]
           - Ureaplasma urealyticum
 gi|6899246|gb|AAF30683.1|AE002124_5 oxygen-independent coproporphyrinogen III oxidase [Ureaplasma
           parvum serovar 3 str. ATCC 700970]
 gi|168827606|gb|ACA32868.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902982|gb|EDT49271.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182675603|gb|EDT87508.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700683|gb|EDU18965.1| coproporphyrinogen III oxidase [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 354

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/333 (25%), Positives = 152/333 (45%), Gaps = 25/333 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +Y+H PFC   C + DF   ++  +  +  F ++FL  ++        +   +I
Sbjct: 4   NKKTKHLYIHIPFCNYICIFSDFKRILKTPQTKK--FFKNFLENIKMHINNFKIKQFKTI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGG P+ +  Q + ++L  I+    V  N E TIE NP  +       ++K  +NRIS
Sbjct: 62  YLGGGVPNCLNNQELEILLKTISPY--VDDNCEYTIECNPELINQTQINLFKKYKINRIS 119

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQR 193
           L VQS+    L+ +   H   ++  AI+L        +S D ++ +   T+   +     
Sbjct: 120 LNVQSMNNDVLKQMNFIHTNQDSKKAINLLHKNGLYNVSCDFLFCISILTLKDLDDVFNF 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L++ ++H+S Y L I++ +L  K H   D     E   ++  N   +  +    H YE+
Sbjct: 180 ILNHKINHVSFYSLEIKEQSLLKKYHITID-----EEKEIEQMNYIINKFAGLNFHRYEV 234

Query: 254 SNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            N +      + HNL YWR  D+  IG GAH   K   +    SI+              
Sbjct: 235 CNWTNNFRYIAKHNLAYWRTEDWAAIGWGAHGYEKNIVYFFDGSIK-------------- 280

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           + ++ K+ L+  +   + LMMGLRL++G+++  
Sbjct: 281 NPILIKKVLTKHELYQQILMMGLRLKDGLNLNK 313


>gi|325499418|gb|EGC97277.1| coproporphyrinogen III oxidase [Escherichia fergusonii ECD227]
          Length = 412

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 152/376 (40%), Gaps = 27/376 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +Y+H PFC  +C +C+  +         +N+I++ +  +Q  +    P   +S   GGG
Sbjct: 41  HLYIHMPFCQSRCGFCNLFTCTGADNAFIDNYIEAII--IQARQMQLAPVDWASFTIGGG 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP L+    ++ +  G+     V + +   IE +PS           +  VNR+S+G+QS
Sbjct: 99  TPLLLNTGQLSRLFRGVFDELQVDAQIFKAIETSPSDTTAEKVALLCQLAVNRVSIGIQS 158

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             +  L  L R H+A  A  A+ L R   FP ++ D+IY +P QT       L +AL Y 
Sbjct: 159 FNDLELATLHRRHSAENAHRALELLRRGNFPIINIDIIYGIPGQTAASLMASLNQALDYQ 218

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L LY L                  +P +     LY   +      G     +     
Sbjct: 219 PDELFLYPL----------------YNMPRQPDMYSLYIEARDRLLHEGYTQTSMRRFVR 262

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL---KMVRKNGHAV 315
           +  +S        + + + +G G  S +    +    S  +     +    + R +   +
Sbjct: 263 VNNDSA--AESCGFENSLALGAGGRSYLGNLHYCTPWSQNQPASRQIVTDFIARPDKTQI 320

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF 373
                LS  +    F++  L   +G+S++D++      +  D     +  +Q +  + Q 
Sbjct: 321 HHGYVLSQAEMKRRFIIKNLFFYKGLSLRDYQHQFFSEVLSDFPLLGDFIKQDYCHQ-QD 379

Query: 374 SRLRCTQRGMTMLDSV 389
           +R+  T +G+ + D +
Sbjct: 380 NRILLTAQGLALSDQL 395


>gi|322513200|ref|ZP_08066328.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
 gi|322121031|gb|EFX92864.1| oxygen-independent coproporphyrinogen III oxidase [Actinobacillus
           ureae ATCC 25976]
          Length = 605

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 5/261 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           Y H PFC   C +C F  +  +    +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 56  YFHIPFCANHCIFCGFYRNAWKQDYSK-IYTDKLIEELAYEAGIRQGNGKIKAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  ++        AGVNRIS+G+Q+ 
Sbjct: 115 PTALNTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKAHACVAAGVNRISIGIQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             +  + LGR H+  EA   + +   +   +  DLI+ LP QT   W  +++ A S  + 
Sbjct: 175 NSKIRKRLGRKHSGEEAYEYLKVLCELDAVVVADLIFGLPNQTDEVWANDIKVASSLPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y       S  G      ++ +F 
Sbjct: 235 GLDIYAFNNYPFLPINKMIEHGSLPAAASFEVQAQHYAYAVENLSKVGWQQVSNNHFAFP 294

Query: 260 --GAESLHNLNYWRYGDYIGI 278
             G  + +N         +  
Sbjct: 295 NRGERNRYNTLVKSNIPCLAF 315


>gi|192290797|ref|YP_001991402.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris TIE-1]
 gi|192284546|gb|ACF00927.1| Coproporphyrinogen dehydrogenase [Rhodopseudomonas palustris TIE-1]
          Length = 486

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 82/333 (24%), Positives = 141/333 (42%), Gaps = 11/333 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGG 79
           Y+H P+C   C +C F  +V R +VG   ++   + E+       L     I +I+ GGG
Sbjct: 98  YLHVPYCQNHCLFCGFFENVWRPEVG-PAYVDDLIAELAAKSHTPLIASAPIDAIYIGGG 156

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  ++A ++  + +   +S++ EIT+E      ++   +    AGVNR+S+GVQS
Sbjct: 157 TPSALDADDLARLMAALHRYLPLSADCEITLEGRSYGFDIAKARKLADAGVNRLSIGVQS 216

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  R LGR  +  E  A +     +    +  DLIY L  Q+   W  ++       
Sbjct: 217 FSTEVRRRLGRKRSGEEVAAFLAELMALGRTSVVCDLIYGLSGQSDADWRRDIDTVSRIG 276

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHAYEISNHS 257
           +D ++LY L +  G    +  ++G L  P+   A   LY       + +G      S+  
Sbjct: 277 LDGVTLYALNMFPGGPMARAVENGKLPQPATPAAQARLYAEGVERLTENGWLQVSQSHLV 336

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
             L   + +N +  R    +  G GA  +      R  I I +  E    MV +N  A +
Sbjct: 337 RSLRERNRYNASIKRGVACLPFGAGAGGQAHGHRWRNVIDIARRRE----MVVQN-LAPI 391

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           E   L     A   ++        + +   E L
Sbjct: 392 EGLALVPSDHAAHAMIAAGLETGRLDLAAVEAL 424


>gi|27367957|ref|NP_763484.1| coproporphyrinogen III oxidase [Vibrio vulnificus CMCP6]
 gi|27359530|gb|AAO08474.1| Radical SAM family protein HutW [Vibrio vulnificus CMCP6]
          Length = 457

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 149/373 (39%), Gaps = 21/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + + ++ L E+     L   +S    +++ GG
Sbjct: 65  LYIHIPFCRVRCTFCNFFQNAASRQL-VDGYFEALLKEIAIKSALPWTQSGVFHAVYVGG 123

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  +  + + I  ++ +S++ EIT+E   +      + G  K G NR S GVQ
Sbjct: 124 GTPTDLSPAQVRQLGEAIRSHFPLSADCEITLEGRINRFSDEMYDGAMKGGFNRFSFGVQ 183

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +    R   R  +  + +  +  LA      +  DL+Y LP QT      +L   +S 
Sbjct: 184 SFDTLVRRSAKRLDDREKVLTRLSELASYDQAPVIVDLLYGLPHQTRDILLQDLNDFIST 243

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               L LYQL +        + + G L  P +      +Y +  +    H L    +++ 
Sbjct: 244 GAHGLDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASMYEIGVNFMRQHHLKQLSVNHW 303

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I                +   +  ++++  +      +
Sbjct: 304 ATDNRERSLYNSLAKTYAEVLPI----GCGAGGSIGGYGMMQHRSLDAYMAAINHGQLPL 359

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKD-WEMLAGR---NLDIECERNLQRQGFIE 369
           +      ++Q   E +   L+     G+ + D      G    +      R  Q +G +E
Sbjct: 360 MMM----TQQHPLEAIFAALKSGFDRGVVMADKLPEFMGDNVFDFLQPLFRLWQERGLVE 415

Query: 370 RVQFSRLRCTQRG 382
             + S    T  G
Sbjct: 416 LNERSA-TLTLAG 427


>gi|117617608|ref|YP_856513.1| coproporphyrinogen III oxidase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559015|gb|ABK35963.1| radical SAM domain protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 459

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 134/375 (35%), Gaps = 24/375 (6%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFG 77
            +Y+H PFC K+C +C+F  +          ++ +    +    +   T  R  ++++ G
Sbjct: 62  ALYIHIPFCRKRCSFCNFFEN-GANPARITRYVNALCRALAQAAETPFTQSRPFTAVYVG 120

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ +    +A++   I + + ++S+ E+T+E   +  +   +      G NR S GV
Sbjct: 121 GGTPTDMSADELAMLAAAIRR-FPLTSDAEVTLEGRLNGFDDAKWHSALAGGFNRFSFGV 179

Query: 138 QSLEEQSLRFLGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + +  +   R  +     I    L R+    +  DLI+ LP Q    W  ++   ++
Sbjct: 180 QSFDTEVRQEAARFDDRETLLIRLGELTRHDDAVIVADLIFGLPGQDDAVWRQDIADVMA 239

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             V  + LYQL    GT   +    G L           +Y          G      S+
Sbjct: 240 SGVHGVDLYQLIAMAGTNLARAEAKGKLGWAADGQQRAAMYAYGAQTLEQGGWQRLSCSH 299

Query: 256 HSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
                AE S +N    R  + +  G GA   V          +    E+    +R  G  
Sbjct: 300 WRRGEAEQSRYNQMAKRGAEILPFGAGAGGNVHGHGLMYGRDLALWHEALAADLRAPGM- 358

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE-----RNLQRQGFIE 369
           V+ +                  L  G     W  LA   + +           Q+ G   
Sbjct: 359 VMGRNPNGRLD----------GLLRGALDSGWLALARLPMPLRAHLQPLFEAWQQHGLAT 408

Query: 370 RVQFSRLRCTQRGMT 384
             +  RL  T  G  
Sbjct: 409 LSE-GRLELTLAGRF 422


>gi|331018491|gb|EGH98547.1| HemN family oxidoreductase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 199

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/169 (39%), Positives = 100/169 (59%), Gaps = 1/169 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
            L +Y+H P+CV+KCPYCDFNSH     + ++ ++ + L ++         R + SIFFG
Sbjct: 31  PLSLYIHIPWCVRKCPYCDFNSHTASPVLPEQEYVDALLADLDLDLPHVYGRELQSIFFG 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTPSL     +  +L G+ +    +S++EIT+EANP + E   F  Y   G+NR+S+G+
Sbjct: 91  GGTPSLFSADALGRLLRGVEQRIRFASDIEITLEANPGTFEQAKFSAYHGLGINRLSIGI 150

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
           QS +   L+ LGR HN  EAI A  +AR   F   + DL++ LP Q+  
Sbjct: 151 QSFQASKLKALGRIHNGDEAIRAADMARQAGFDNFNLDLMHGLPDQSQD 199


>gi|281356027|ref|ZP_06242520.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
 gi|281317396|gb|EFB01417.1| Coproporphyrinogen dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
          Length = 433

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/392 (21%), Positives = 157/392 (40%), Gaps = 19/392 (4%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + +   +         +Y+H PFC  +C +C F S        +  +++    E+    +
Sbjct: 27  TVWAEALADDDGGRRTLYLHIPFCRSRCSFCLFYSGSATDSE-RAGYVRLLAKELNDWAE 85

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
              P  I++++FGGGTPS + PQ + L+L  +   + ++++ EIT+E+  + +       
Sbjct: 86  RLPPSPINAVYFGGGTPSDLAPQEMELLLGILRSRYPLANDCEITLESRLNGLTDRKIDA 145

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQT 183
               GVNR SLGVQ+ + +  R LGR  +    +  +  L       ++ DL+Y LP QT
Sbjct: 146 AIANGVNRFSLGVQTFDTELRRRLGRVSDRETVLDTLGRLTARNQASVAVDLLYGLPGQT 205

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSI 242
                 +L+  L+  V  LS Y+L +   +    ++       +P E     LY L +  
Sbjct: 206 PELLLADLETLLNSGVSGLSFYRLNVRPTSELAGQLAAGTMPPVPPEETIYRLYELAEER 265

Query: 243 TSAHGLHAYEISNHSFLGAE-SLHN-LNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
             A G+      + SF   E +L N ++ W+    +  G  A  R+  G+++   ++   
Sbjct: 266 LEAAGVKRLSFKHFSFDPRERNLFNEISAWKV-PCLPFGLKARGRL--GAYQFRQTV--D 320

Query: 301 PESWLKMVRKNGHAVVEKEFLSSE--------QQADEFLMMGLRLREGISVKDWEMLAGR 352
              +   V      V     L  +         Q +  +          +  +      R
Sbjct: 321 MAVYRSCVETGAKPVERAGKLPPDYPVAFRLTGQLNSRMTADPAFIAAAAPPELRETVRR 380

Query: 353 NLDIECERNLQRQGFIERVQFSRLRCTQRGMT 384
            L  +    L+R+G      +   + T+ G  
Sbjct: 381 VLCKQLS-ELEREGLTAATTYGGWKLTRMGRF 411


>gi|225181025|ref|ZP_03734472.1| Coproporphyrinogen dehydrogenase [Dethiobacter alkaliphilus AHT 1]
 gi|225168222|gb|EEG77026.1| Coproporphyrinogen dehydrogenase [Dethiobacter alkaliphilus AHT 1]
          Length = 386

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 135/326 (41%), Gaps = 21/326 (6%)

Query: 4   LSAYENNMTGQGSNS--LGVYVHWPFCVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQ 60
           ++  E  +  + S      VYV  PFC  +C YC F SH  +     +  F+ + L E++
Sbjct: 52  VAEVERPILSESSRPGLFSVYVGIPFCPTRCLYCSFPSHSLKELGKLRGQFVDTLLWEIE 111

Query: 61  WMRQLTGPRSIS--SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              ++     ++  +++ GGGTP+ + P ++  +L  + + +               ++ 
Sbjct: 112 ETAKMAAKYKLNPYTVYVGGGTPTALSPTDLKRVLSALREAFPGVLREFTVEAGRADTLT 171

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
             +        V+R+S+  Q++  ++L  +GR H+A +   A    +    P ++ DLI 
Sbjct: 172 DEHLAVLSHHQVSRVSVNPQTMHGKTLELIGRCHSAEDVDRAARKVKQAKIPVLNMDLIV 231

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP +        +++ ++ A ++++L+  + ++ + F +        LP++     ++ 
Sbjct: 232 GLPGEDALMVRESMEQIMALAPENITLHVFSPKRASRFSE--DRRQFTLPADAEVAAIHR 289

Query: 238 LTQSITSAHGLHAY-----------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR 285
           +   +        Y           E       G E ++N+          G+G GA S+
Sbjct: 290 MATEMLEKKYKPYYLYRQRDILGGQENIGFCLPGYECVYNIVMIEERHHIFGLGGGATSK 349

Query: 286 -VKVGSHRVAISIEKHPESWLKMVRK 310
            ++     + +S  K    +++ V+ 
Sbjct: 350 IIRSDGTFMNLSNPKDVRIYIERVKD 375


>gi|269216488|ref|ZP_06160342.1| radical SAM domain protein [Slackia exigua ATCC 700122]
 gi|269130017|gb|EEZ61099.1| radical SAM domain protein [Slackia exigua ATCC 700122]
          Length = 438

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 156/400 (39%), Gaps = 29/400 (7%)

Query: 8   ENNMTG-QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           E  + G Q      +Y+H PFC + CPYC FN      +   + + ++   EM  +++L 
Sbjct: 26  ETRIPGPQAGMPYMLYMHIPFCERLCPYCSFNRFPF-NEGRAKAYYENLRREMMMVKEL- 83

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
                 S++ GGGTP+++    +   +D   + +++     ++ E NP+ +         
Sbjct: 84  -GYDFDSLYIGGGTPTIL-LDELCKTIDAAKREFSIKD---VSCETNPNHLTEPYLSEL- 137

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEA---IAAIHLARNIFPRMSFDLIYALPKQT 183
           +  VNR+S+GVQS ++  L+ + R     +A   + A+ +A   F  M+ D+I+  P QT
Sbjct: 138 EGRVNRLSVGVQSFDDGLLKQMDRYDKYGDAASIMEAVKIAAPYFDSMNVDMIFNFPAQT 197

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                 +L+  +    +  + Y L         +      +     +     Y +     
Sbjct: 198 EDILRRDLEAVIETGCNQTTFYPLMASPA---VERSLAATVGKVDYDREQRFYRIISETL 254

Query: 244 SAHGLH-AYEISNHSF---LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
           +          S  +F     A ++ +     Y  Y  IG G  + +    +    S+  
Sbjct: 255 TDGPDALFTHSSAWTFNRTADAPTMIDEYIVDYEQYPAIGSGGFTYLGDSQYINTFSV-- 312

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLD--I 356
               + + +     +++ K   S   +    FLM    LR  +    +E   G ++   +
Sbjct: 313 --REYNQAIDAGRMSIMGKTTFSKANRMRYRFLMQLFGLR--LDKTRFERDFGCSVQRGL 368

Query: 357 ECERNLQRQ-GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             E    +  G I++    +L  T +G  ++  ++    +
Sbjct: 369 PVEYAFMKAVGGIDKDDDEQLTLTPKGRYLMVVMMRQFFI 408


>gi|238626064|gb|ACR48343.1| NosN [Streptomyces actuosus]
          Length = 395

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 154/377 (40%), Gaps = 30/377 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQSFLTEMQWMRQL--TGPR 69
           L +YVH PFC  KC +CD+   +    +        ++ +I +   E+     +      
Sbjct: 6   LMIYVHIPFCHSKCTFCDWVQAIPTKDLLRKPGDSVRQKYISALCAEIAERGAMHRAAGD 65

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
               +++GGGT S ++ Q  A +++ +  ++ +S+  E TIE +P +V+      YR  G
Sbjct: 66  IPHVLYWGGGTASSLDEQETAAVMEALHSSFDMSTVAEATIECSPDTVDERKLAFYRGLG 125

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            NR+S GVQS ++  LR LGR H A +A   +H AR   F  +S D++   P Q   + +
Sbjct: 126 FNRVSSGVQSFDDDRLRRLGRRHTAEQAGRIVHAARAAGFEDVSIDIMSGFPDQEADELD 185

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             + RAL   V+HLSLY      GT   +     +            +   +      GL
Sbjct: 186 RTVDRALELPVNHLSLYSFRPTPGTFMRRRMDSSERRTYLRRQQAL-FTRARRAIEGFGL 244

Query: 249 HAYEISNHSFL-GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
             Y       +    S++   +    D +G+G GA S V           + H +  L  
Sbjct: 245 SEYANGYFGKVSPFASMY---FQHRADTVGLGSGAISLVDQ-------RFKSHQKGLLHS 294

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN------ 361
              +  A         ++     L  GL + +GI  +DW    G +L     R       
Sbjct: 295 YVDDPLAFDIDVPAGQDRVLVSLLQAGLAMFDGIPREDWRQRTGTDLAEVLLRPTVAPLA 354

Query: 362 --LQRQGFIERVQFSRL 376
             L+ +G +E     RL
Sbjct: 355 DFLRGRGLVEDDHGIRL 371


>gi|229517671|ref|ZP_04407116.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae RC9]
 gi|229345707|gb|EEO10680.1| radical SAM family protein HutW similar to coproporphyrinogen III
           oxidase oxygen-independent associated with heme uptake
           [Vibrio cholerae RC9]
          Length = 455

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/380 (20%), Positives = 147/380 (38%), Gaps = 27/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 66  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G NR S GVQ
Sbjct: 125 GTPTELSPEQIRQLGTAICESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 245 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHW 304

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +  +++L  ++     V
Sbjct: 305 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLV 360

Query: 316 ---VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQG 366
                +            L   L+     G+     +  +      +  +      Q+ G
Sbjct: 361 AMMARQHEYDP-------LFAALKAGFDAGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIG 413

Query: 367 FIERVQFSRLRCTQRGMTML 386
            +E V+   L  T  G    
Sbjct: 414 LVE-VEQDYLTLTTAGRFWS 432


>gi|5106980|gb|AAD39908.1|AF119047_1 coproporphyrinogen oxidase homolog PhuW [Vibrio parahaemolyticus]
          Length = 420

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/313 (21%), Positives = 133/313 (42%), Gaps = 10/313 (3%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
            +     +N   +Y+H PFC  +C +C+F  +    K+  + +  + + E++    L   
Sbjct: 53  TSDRNARNNKRCLYIHVPFCRVRCTFCNFFQNAASRKL-VDEYFAALMQELKEKAALPWT 111

Query: 69  RS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           +S    +++ GGGTP+ + P+ + ++   I   + ++S+ EIT+E   +      +QG  
Sbjct: 112 QSGIFHAVYIGGGTPTDLSPEQVRVLGQAIHDYFPLASDCEITLEGRINRFSDELYQGAL 171

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMT 185
             G NR S GVQS   Q  R   R  +  + +  +  LA+     +  DL+Y LP QT  
Sbjct: 172 DGGFNRFSFGVQSFNTQVRRSAKRLDDREDVLKRVSELAKEDKIPVIIDLLYGLPYQTKE 231

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITS 244
             E +L   +S     L LYQL +        + + G +  P +      +Y L  +  +
Sbjct: 232 ILEQDLNDFMSTGAHGLDLYQLVVGGTAPMLNLVEKGKIPPPATTPEKAGMYELGVNFMA 291

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
              +    +++ +    E S++N     Y + + I                + + +  ++
Sbjct: 292 KRHMKQLSVNHWAVDNRERSIYNSLAKTYAEVLPI----GCGAGGNIGGYGMMLHRSLDT 347

Query: 304 WLKMVRKNGHAVV 316
           ++K V +    + 
Sbjct: 348 YIKAVNEGQSTIA 360


>gi|223039639|ref|ZP_03609925.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter rectus RM3267]
 gi|222879022|gb|EEF14117.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter rectus RM3267]
          Length = 423

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/310 (28%), Positives = 133/310 (42%), Gaps = 28/310 (9%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I ++F GGGTPS ++      + + +A    +++N EIT EANP+S         +  G
Sbjct: 126 KIETVFIGGGTPSAVDGGYYERLFEAVAPY--LAANAEITTEANPNSASQKWLSQMKSCG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWE 188
           VNR+S G QS  E  L+FLGR H+A +   A+  A+      ++ DLIY     T  + E
Sbjct: 184 VNRVSFGAQSFFEDKLKFLGRIHDARQIYEAVANAKIAGLENINVDLIYGTKLDTKKRLE 243

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            E Q   +  V H+S Y LT+E+ T F                   L           GL
Sbjct: 244 QEAQNIRNIGVSHVSAYSLTLEENTPFAGKINYAKDSP-------RLAKFMIDRIEEAGL 296

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             YEISN    G    HNL YW+  +Y+ IG  A    +      A ++  + +      
Sbjct: 297 KQYEISNF---GQICKHNLGYWQGKNYLAIGAYAVGFWRDHRFYNASNLNAYVK------ 347

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
             N HA  + E LS+++   E + +G R   GI   +     G+       R L+  G +
Sbjct: 348 --NPHA-KKIENLSTDELNLERIFLGARSIVGIEQNNLNAEQGQR-----ARLLKNSGKL 399

Query: 369 ERVQFSRLRC 378
            + +  R   
Sbjct: 400 -KFENGRYYA 408



 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 21 VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
          +YVH PFC  KCPYC F S V +  +    +  + + + +
Sbjct: 3  LYVHIPFCESKCPYCAFGSVVGKRNL-TSAYFDAMIADFR 41


>gi|258627642|ref|ZP_05722418.1| hutW protein [Vibrio mimicus VM603]
 gi|258580085|gb|EEW05058.1| hutW protein [Vibrio mimicus VM603]
          Length = 453

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 148/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + + E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALMEELKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ ++++ EIT+E   +      F    + G NR S GVQ
Sbjct: 123 GTPTELSPQQIRQLGRTIRHSFPLTADCEITLEGRINRFSDKMFDQALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    I  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVIERIAALAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMDT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 243 GAQGIDLYQLMVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGVEFMAKHHLRPVSVNHW 302

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               +I   +   ++L  ++     V
Sbjct: 303 ARDNRERSLYNSLAKTYAEVLPI----GCGAGGNIGGYSIMQHRQLSTYLDAMQNGQPLV 358

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGI----SVKDWEMLAGRNLDIECERNLQRQGFIE 369
                  + Q   E L   L+     G+     +  +   +  +  +      Q  G +E
Sbjct: 359 AMM----ARQHECEPLFAALKSGFDSGVVAKQRLPKFNHHSTFDWLMPLFLRWQSVGLVE 414

Query: 370 RVQFSRLRCTQRGMTML 386
            V+   L  T  G    
Sbjct: 415 -VEHEYLTLTTAGRFWS 430


>gi|261212954|ref|ZP_05927238.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
 gi|260838019|gb|EEX64696.1| coproporphyrinogen III oxidase, oxygen-independent [Vibrio sp.
           RC341]
          Length = 453

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 149/377 (39%), Gaps = 21/377 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 64  LYIHVPFCRVRCTFCNFFQNAACRQL-VDAYFAALLVEIKQKAALPWTQTGVFHAVYIGG 122

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + PQ I  +   I  ++ +S++ EIT+E          F+   + G NR S GVQ
Sbjct: 123 GTPTELSPQQIRTLGKAIRDSFPLSTDCEITLEGRIHRFSDEMFEQALEGGFNRFSFGVQ 182

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   Q  R   R  +    +  I  LA      +  DL+Y LP QT   +E +LQ  +  
Sbjct: 183 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 242

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               + LYQL +        + + G L  P +      LY +     + H L    +++ 
Sbjct: 243 GAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKATLYQIGAEFMTKHHLRPLSVNHW 302

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I               ++   +   ++L+ ++     V
Sbjct: 303 TRDNRERSLYNSLAKTYAEVLPI----GCGAGGNLGGYSLMQHRQLSTYLEAMQNGQSVV 358

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKDWEMLAGRNLDIECERNL----QRQGFIE 369
                  + Q + E +   L+     G+  K       +    +  + L    Q  G +E
Sbjct: 359 AMM----ARQHSYEPVFAALKSGFDSGVVAKSRLPSCNQRPTFDWLKPLFVRWQALGLVE 414

Query: 370 RVQFSRLRCTQRGMTML 386
            +    L  T  G    
Sbjct: 415 -LDQEYLTLTMAGRFWS 430


>gi|237753152|ref|ZP_04583632.1| coproporphyrinogen III oxidase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375419|gb|EEO25510.1| coproporphyrinogen III oxidase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 427

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/351 (22%), Positives = 148/351 (42%), Gaps = 23/351 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
             S  +Y+H PFC   C YC FN  + + +  +  + ++   EMQ ++ L      S ++
Sbjct: 43  DKSYLLYMHIPFCATLCTYCSFNRFLFQEEKAK-LYFENLRKEMQMVKDL--GYDFSEVY 99

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGT S++ P  +   LD     + +    E++ E++P+ ++    + ++   V+R+S+
Sbjct: 100 VGGGTTSIM-PDELCKTLDLAKSLFNIK---EVSCESDPNHLQKETLESFKGR-VDRLSV 154

Query: 136 GVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           GVQS ++  LR +GR     +  E    +  A  I P ++ DLI+  P QT      +L+
Sbjct: 155 GVQSFDDGILRKIGRYEKFGSGEETYKKLEQAIGILPILNVDLIFNFPNQTQEMLVRDLE 214

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  + L+ Y L              G++ L +E        L + I  +       
Sbjct: 215 LIKQLKPNQLTTYPLMSSPSVKSILKRSIGEVSLQNEA------QLYEQILESLQNDFTP 268

Query: 253 ISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           +S+ +F    S     Y     +Y+GIG G+ S +    +    S     + + + ++  
Sbjct: 269 LSSWAFSHKGSEIFDEYVVDNDEYVGIGSGSFSFLNGTLYTNTFS----LKEYAQKIQNG 324

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
              V  +   S + Q    LM+ L      S K ++     NL+ +  + L
Sbjct: 325 QMGVARERKYSKKSQLQYRLMVEL-FGGKASAKRFKERYNANLEWDLFKEL 374


>gi|329120419|ref|ZP_08249085.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327462103|gb|EGF08431.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 608

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/379 (18%), Positives = 137/379 (36%), Gaps = 15/379 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           Y+H PFC   C +C F  +  + +  +  +    + E+     +  G   I +++FGGGT
Sbjct: 56  YLHIPFCANHCVFCGFYRNAWKDEQSK-TYTDKVIAELAQEAGIRQGGGKIRAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +   ++  ++    +   ++ + E T+E   S  + +  Q    AGV RIS+GVQ+ 
Sbjct: 115 PTALLTGDLVRLIRACYQYLPLADDCEFTLEGRMSHFDPDKAQAAIDAGVTRISIGVQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +    R LGR H+  EA A +     +   +  DLI+ LP Q+   W+ +L  A +  + 
Sbjct: 175 DTAIRRRLGRKHSGEEAAAYLERLGRLNTVLVADLIFGLPGQSGEIWQNDLHIAAALPLA 234

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y           +M + G    P   +     Y    +  +  G      ++ ++ 
Sbjct: 235 GLDTYAFNCYPFLPINRMIEKGAFPPPAGFDTQSLQYAHAVAYLAEQGWEQISNNHFAYP 294

Query: 260 GA--ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
           G    +L+N         +       S            ++   +S+L       +    
Sbjct: 295 GRGERNLYNRLVKSNIPCLAF----GSGAGGNGGGYNYQVQSDLDSYLATPEGEKNIAYM 350

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRL- 376
                ++     +L+  L+    +   D  + A               G +       L 
Sbjct: 351 SRHSDNK-----YLLGRLQHDIELGYIDSRLFAPHPRAAALLAQWAGLGLMGTPDSDGLI 405

Query: 377 RCTQRGMTMLDSVIANLAV 395
           R    G     ++   L +
Sbjct: 406 RLNTSGRYWSPTLTRRLML 424


>gi|225076189|ref|ZP_03719388.1| hypothetical protein NEIFLAOT_01224 [Neisseria flavescens
           NRL30031/H210]
 gi|224952532|gb|EEG33741.1| hypothetical protein NEIFLAOT_01224 [Neisseria flavescens
           NRL30031/H210]
          Length = 606

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 5/260 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           Y+H PFC   C +C F  +  +       +    + EM    ++ TG   I +++FGGGT
Sbjct: 56  YLHIPFCANHCVFCGFYRNAWKDSQSSV-YTDKIIEEMAAESEVRTGKGKIRAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  ++   +   +AG NRIS+GVQ+ 
Sbjct: 115 PTALLTEDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLEKAKACIEAGANRISIGVQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R LGR H+  EA   +     +   +  DL++ LP QT   W+ ++ RA    + 
Sbjct: 175 NTAIRRRLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDDVWQNDIARAAELPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKD-GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y   +       +M +       P  ++  D Y  T       G      S+ ++ 
Sbjct: 235 GLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWEQVSNSHFAYP 294

Query: 260 GA--ESLHNLNYWRYGDYIG 277
           G    + +N         + 
Sbjct: 295 GRGERNRYNTLIKSDIPCLA 314


>gi|37676085|ref|NP_936481.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
 gi|37200625|dbj|BAC96451.1| coproporphyrinogen III oxidase [Vibrio vulnificus YJ016]
          Length = 459

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 148/373 (39%), Gaps = 21/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E+     L   +S    +++ GG
Sbjct: 67  LYIHIPFCRVRCTFCNFFQNAASRQL-VDGYFAALLKEIAIKSALPWTQSGVFHAVYVGG 125

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  +  + + I  ++ +S++ EIT+E   +      + G  K G NR S GVQ
Sbjct: 126 GTPTDLSPAQVRQLGEAIRSHFPLSADCEITLEGRINRFSDEMYDGAMKGGFNRFSFGVQ 185

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +    R   R  +  + +  +  LA      +  DL+Y LP QT      +L   +S 
Sbjct: 186 SFDTLVRRSAKRLDDREKVLTRLSELASYDQAPVIVDLLYGLPHQTRDILLQDLNDFIST 245

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               L LYQL +        + + G L  P +      +Y +  +    H L    +++ 
Sbjct: 246 GAHGLDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASMYEIGVNFMRQHHLKQLSVNHW 305

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I                +   +  ++++  +      +
Sbjct: 306 ATDNRERSLYNSLAKTYAEVLPI----GCGAGGSIGGYGMMQHRSLDAYMAAINYGQLPL 361

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKD-WEMLAGR---NLDIECERNLQRQGFIE 369
           +      ++Q   E +   L+     G+ + D      G    +      R  Q +G +E
Sbjct: 362 MMM----TQQHPLEAIFAALKSGFDRGVVMADKLPEFMGDNVFDFLQPLFRLWQERGLVE 417

Query: 370 RVQFSRLRCTQRG 382
             + S    T  G
Sbjct: 418 LNERSA-TLTLAG 429


>gi|307257592|ref|ZP_07539352.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306863895|gb|EFM95818.1| Coproporphyrinogen III oxidase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 607

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 18/380 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGT 80
           YVH PFC   C +C F  +  + +  +  +    + E+ +   +  G   I +++FGGGT
Sbjct: 58  YVHIPFCAGHCIFCGFYRNAWKQEYSK-IYTDKLIEELAYEASIRQGSGKIKAVYFGGGT 116

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +++  ++    +   ++ + E TIE   S  ++   +    AG NRIS+G+Q+ 
Sbjct: 117 PTALDTEDLVRLIKACYQYLPLADDCEFTIEGRISHFDIEKARACVAAGANRISIGIQTF 176

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                + LGR H+  EA A +     +   +  DLI+ LP QT   W  ++Q A +  + 
Sbjct: 177 NSNIRKRLGRKHSGEEAYAYLKALCELDAVVVADLIFGLPNQTDEVWANDIQVASTLPLS 236

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L +Y           KM + G L    S  V    Y          G      ++ +F 
Sbjct: 237 GLDIYAFNNYTFLPINKMIEHGSLPAAASFEVQAQHYAYAVEHLQNTGWQQVSNNHFAFP 296

Query: 260 --GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G  + +N         +       S         +  +    +++L           +
Sbjct: 297 NRGERNRYNTLVKSNMPCLAF----GSGAGGNFGGYSFQVHSTLQTYLDT-------PAD 345

Query: 318 KEFLS--SEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
           K+ LS  S+  A++ L+  ++    +   D ++       ++     Q+   +   Q   
Sbjct: 346 KKALSFLSKHGANKPLLGVVQHDLELGYLDIKLFKHNPKAMKLLMQWQQLSLLNIDQDGI 405

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R    G     ++I  L +
Sbjct: 406 ARLNISGRYWSPTLIRKLML 425


>gi|225024396|ref|ZP_03713588.1| hypothetical protein EIKCOROL_01271 [Eikenella corrodens ATCC
           23834]
 gi|224942777|gb|EEG23986.1| hypothetical protein EIKCOROL_01271 [Eikenella corrodens ATCC
           23834]
          Length = 610

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 5/260 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGT 80
           Y+H PFC   C +C F  +  + + G   ++   + E+     Q TG   I +++FGGGT
Sbjct: 64  YLHIPFCANHCVFCGFYRNAWKEEHG-GAYVDKVIEELAAEAEQRTGNGKIQAVYFGGGT 122

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++  ++  ++    +   ++ + E T+E   S   ++  +   +AGVNRIS+G+Q+ 
Sbjct: 123 PTALDTPDLVRLIRACYQYLPLADDCEFTLEGRMSHFGLDKARAAVEAGVNRISIGIQTF 182

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R LGR H+  EA   +     +   +  DLI+ LP QT   W  +++RA    + 
Sbjct: 183 NTAIRRRLGRKHSGEEAYGYLKELCGLDAVIVADLIFGLPGQTDDIWAHDIERAAGLPLS 242

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y           +M + G    P   +V    Y       +  G      ++ ++ 
Sbjct: 243 GLDTYAFNCYPFLPINRMIEKGAFPPPLGFDVQSQHYAYAVRELTRLGWQQVSNNHFAYP 302

Query: 260 GA--ESLHNLNYWRYGDYIG 277
           G    + +N         + 
Sbjct: 303 GRGERNRYNTLVKSNMPCLA 322


>gi|241760523|ref|ZP_04758616.1| coproporphyrinogen dehydrogenase [Neisseria flavescens SK114]
 gi|241319027|gb|EER55529.1| coproporphyrinogen dehydrogenase [Neisseria flavescens SK114]
          Length = 606

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 5/260 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGT 80
           Y+H PFC   C +C F  +  +       +    + EM    ++   +  I +++FGGGT
Sbjct: 56  YLHIPFCANHCVFCGFYRNAWKDSQSSV-YTDKIIEEMAAEAEVRTDKGKIRAVYFGGGT 114

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  +++  ++    +   ++ + E TIE   S  ++   Q   +AG NRIS+GVQ+ 
Sbjct: 115 PTALLTEDLVRLIRACYQYLPLAEDCEFTIEGRMSHFDLEKAQACIEAGANRISIGVQTF 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R LGR H+  EA   +     +   +  DL++ LP QT   W+ ++ RA    + 
Sbjct: 175 NTAIRRRLGRKHSGDEAFEYLAKLCELDAVIVADLMFGLPNQTDDVWQNDIARAAELPLS 234

Query: 201 HLSLYQLTIEKGTLFYKMHKD-GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y   +       +M +       P  ++  D Y  T       G      S+ ++ 
Sbjct: 235 GLDTYAFNLYPMLPINRMIEKGAFPTPPGFDIQADQYAYTVETLLEKGWEQVSNSHFAYP 294

Query: 260 GA--ESLHNLNYWRYGDYIG 277
           G    + +N         + 
Sbjct: 295 GRGERNRYNTLIKSDIPCLA 314


>gi|325266699|ref|ZP_08133375.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
 gi|324981808|gb|EGC17444.1| oxygen-independent coproporphyrinogen III oxidase [Kingella
           denitrificans ATCC 33394]
          Length = 610

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 5/260 (1%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGT 80
           Y+H PFC   C +C F  +  + + G   ++   + E+     Q +G   I +++FGGGT
Sbjct: 64  YLHIPFCANHCVFCGFYRNAWKEEQG-GAYVDKVIEELAAEAEQRSGSGKIQAVYFGGGT 122

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++  ++  ++    +   ++ N E T+E   S   +N  +   +AGVNRIS+G+Q+ 
Sbjct: 123 PTALDTPDLVRLIRACYQYLPLADNCEFTLEGRMSHFGLNKARAAVEAGVNRISIGIQTF 182

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R LGR H+  EA   +     +   +  DLI+ LP QT   WE +++RA S  + 
Sbjct: 183 NTAIRRRLGRKHSGEEAYGYLKELCGLDAVIVADLIFGLPGQTDDIWEHDIERAASLPLS 242

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  Y           +M + G    P   +V    Y       +  G      ++ ++ 
Sbjct: 243 GLDTYAFNCYPFLPINRMIEKGAFPPPLGFDVQSQHYAYAVRELTRLGWQQVSNNHFAYP 302

Query: 260 GA--ESLHNLNYWRYGDYIG 277
           G    + +N         + 
Sbjct: 303 GRGERNRYNTLVKSNMPCLA 322


>gi|302874942|ref|YP_003843575.1| Coproporphyrinogen dehydrogenase [Clostridium cellulovorans 743B]
 gi|307690440|ref|ZP_07632886.1| coproporphyrinogen III oxidase [Clostridium cellulovorans 743B]
 gi|302577799|gb|ADL51811.1| Coproporphyrinogen dehydrogenase [Clostridium cellulovorans 743B]
          Length = 476

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 68/329 (20%), Positives = 146/329 (44%), Gaps = 22/329 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWM 62
           ++  E ++     N +G+Y+  PFC  +C YC F S+  +  +   + ++++   E+  +
Sbjct: 134 VAKTEISIVNTEKNVIGLYLGMPFCPTRCLYCSFASNPIKTCEKLVKPYLEALSKEISMI 193

Query: 63  RQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEA-NPSSVE 118
            +    +   I +++FGGGTP+ +  +   +IL+ +  N+    NV E T+E   P S+ 
Sbjct: 194 SKYINDKKLKIETVYFGGGTPTAVNNEEFEMILNDVYTNFIKDKNVKEFTVECGRPDSIT 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
                  ++  V+RIS+  QS+ E++L+ +GR+H   E     HLAR   F  ++ DLI 
Sbjct: 254 EEKLMTMKRYDVSRISINPQSMNEKTLKTIGRHHTIEEVKKKFHLARKLGFTNINMDLII 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLY 236
            LP + + + +           D ++++ L I++G+   + +  D    +   +  + +Y
Sbjct: 314 GLPNEGVDEVKTTCAELFELKPDSVTVHGLAIKRGSRLQEDLINDKKYSVAKNSNIITMY 373

Query: 237 NLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAH 283
           N  +++ +   +  Y            E   ++      ++N+         I +G    
Sbjct: 374 NEVENLANKLNMRPYYMYKQKNMVGNLENVGYATDNNLCIYNIQMIEEKQTIIALGADGI 433

Query: 284 SRVKVG--SHRVAISIEKHPESWLKMVRK 310
           S+V     +     +  K    + K + +
Sbjct: 434 SKVVFHEENRHERFANLKDVLEYTKRIDE 462


>gi|269798269|ref|YP_003312169.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269094898|gb|ACZ24889.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 475

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 154/339 (45%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +   ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ 
Sbjct: 139 EYQRPF---LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLRALNRDIED 195

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           M+ +      ++ +++ GGGTP+++E ++   +L  ++    VS   E T+EA  P SV 
Sbjct: 196 MKSIVDSYGLTVDTLYMGGGTPTVLEDEDFHQVLKQLSLL--VSEGHEFTVEAGRPDSVN 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +   + GVNRIS+  Q++++  LR +GR H+  +    +   +N     ++ D I 
Sbjct: 254 PTKLRSMLELGVNRISINPQTMQDDILRRIGRGHSVRDVDELLQYVKNNTSLAVNMDFIA 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QTM+     +        ++++++ L +++G+  Y +H + D+  P EN+  ++  
Sbjct: 314 GLPNQTMSNMIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDDI--PEENLVAEMVQ 371

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +    A G   Y            E   ++  G    +N+         + +GPG+ S
Sbjct: 372 YGKERLEAAGYMPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQSILSMGPGSSS 431

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + ++   +R     + K  + +   +  + +  H + E+
Sbjct: 432 KWMRAPEYRQLKQHMPKDVDVYHVTIDALLEKRHKICER 470


>gi|218676071|ref|YP_002394890.1| coproporphyrinogen III oxidase [Vibrio splendidus LGP32]
 gi|218324339|emb|CAV25688.1| Oxygen-independent coproporphyrinogen III oxidase [Vibrio
           splendidus LGP32]
          Length = 469

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 161/391 (41%), Gaps = 23/391 (5%)

Query: 2   KYLSAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           K L  ++  M   G+  +   +Y+H PFC  +C +C+F  +    K+  + +  + + E+
Sbjct: 44  KKLEIFDELMLSEGKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDEYFDALMVEL 102

Query: 60  QWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +   + +  +S    +++ GGGTP+ + P  + L+   I + + ++++VE+T+E   +  
Sbjct: 103 KQKAKTSWAQSGLFHAVYIGGGTPTDLSPLQVELLGKAIRQYFPLANDVEMTLEGRINRF 162

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLI 176
               F    + G NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+
Sbjct: 163 GDEMFDRSLEGGFNRFSFGIQSFNTQVRRSAKRLDDREVVLERISSLSRTEQAPIVLDLL 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDL 235
           Y LP Q+M  ++ +L+  +S     + LYQL +        + + G +  P +      +
Sbjct: 223 YGLPHQSMEVFQQDLEDYMSTGAHGIDLYQLIVSGNAPMLNLVEKGKIPPPANTPDKASM 282

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           Y       + H +    +++ +    E S++N     Y + + I                
Sbjct: 283 YLAGVEFMAKHKVKQLSVNHWTRDNRERSIYNSLAKTYAEVLPI----GCGAGGNIGGHG 338

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR--LREG-ISVKDWEMLAG 351
           +   +  +S+++ +++    +      SS     E +   L+     G +         G
Sbjct: 339 VMQHRTLDSYMESIKQGQLPIAMMTKQSS----LEPIFSSLKAGFDSGVVRRSTLPSFMG 394

Query: 352 RNLDIECE---RNLQRQGFIERVQFSRLRCT 379
           ++     +    + ++ G ++  +   L  T
Sbjct: 395 QDTFDYLKPLFSHWEKNGLVDLSE-DYLSLT 424


>gi|237737990|ref|ZP_04568471.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419870|gb|EEO34917.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 411

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 88/384 (22%), Positives = 164/384 (42%), Gaps = 32/384 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFG 77
           G+YVH P+C K C +C+ N   ++     +++++    E +    ++    + I++IFFG
Sbjct: 44  GIYVHTPYCDKICSFCNMNR--KQVSNNLDDYVEYLCKEFEKYGSKKYVQGKEITTIFFG 101

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +   +  IL  +  ++ +SSN E T E    ++ +       K GVNR+S+G+
Sbjct: 102 GGTPTIYKEYQLEKILSTLTNSFNISSNCEFTFETTLHNLTLKKLAIMEKYGVNRLSIGI 161

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++  + L R +   E I  I   +  F   +  D+IY    +++ + E + + A  
Sbjct: 162 QTFSDRGRKLLNRTYEQKEIIKRIKELKKNFKGLICIDIIYNYLDESLEEIENDAKIATE 221

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VD +S Y L I +G+   K   +  L             L  +       + Y++  H
Sbjct: 222 LEVDSISFYSLMIHEGSNLSKALNENKLN--FNYQIYRDKELHHTFLEKTLNNGYKLLEH 279

Query: 257 SFL---GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           + +     E  +  N   + D   IG GA  RVK   +            ++    K+ +
Sbjct: 280 TKITNGKDEYRYIKNINSFSDLFAIGVGAGGRVKNIEYFN-------LNKFITFYAKDSN 332

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIER 370
              + + LS   Q  E           + + +   L G  +  E  R L   Q+  +IE 
Sbjct: 333 FKYKVKKLSGILQYPE-----------VKLSNIRELTGDKIYPEILRLLQEFQKSKYIEF 381

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
            + S  + T  G+   +S++A L 
Sbjct: 382 FEDS-FKYTLDGIFWGNSIVAVLI 404


>gi|218264407|ref|ZP_03478264.1| hypothetical protein PRABACTJOHN_03960 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222010|gb|EEC94660.1| hypothetical protein PRABACTJOHN_03960 [Parabacteroides johnsonii
           DSM 18315]
          Length = 237

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 10/241 (4%)

Query: 158 IAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           + A+ L +    P +S DLIY LP QT+ +W+  L  A+   + H+S Y L  E+GT  Y
Sbjct: 1   MRAVGLCKENGIPNISIDLIYGLPGQTLEEWQENLNDAIHLEIPHISAYHLIYEEGTALY 60

Query: 217 KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
           K+ + G +    E ++V L++   +  +  G   YEISN +  G  S HN +YW    YI
Sbjct: 61  KLMEAGKVAPIEEELSVTLFSTLINRLAEAGYLHYEISNFALPGYFSQHNSSYWTGKKYI 120

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           GIGP AHS           S+  + E       + G   +E E L    + ++F++ GLR
Sbjct: 121 GIGPSAHSYDGESRQWNISSLPHYLEGI-----RTGIPNIEIEKLDINTKYNDFIITGLR 175

Query: 337 LREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              GI   +     G       ER       QG +   +   L  ++ G+ + D ++++L
Sbjct: 176 TMWGIRTANIREQFGEEKQAYLERQAATYLHQGLL-IYENDTLTLSKEGIFISDGIMSDL 234

Query: 394 A 394
            
Sbjct: 235 L 235


>gi|303234161|ref|ZP_07320807.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna BVS033A4]
 gi|302494702|gb|EFL54462.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna BVS033A4]
          Length = 435

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 134/310 (43%), Gaps = 19/310 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +Y++ PFC  +C YC F + V +    +E ++   L E+  + +      I +I
Sbjct: 120 DEKNYNIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEVSKSIDKYKIKTI 179

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++   +  +L  I + +   + +E T EA    S++ +  +  RK  V RI
Sbjct: 180 YVGGGTPTSLDYTMLEKLLKAIEECFVSENLLEYTFEAGREDSLDFDKLKLLRKYNVTRI 239

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  E++L+ +GR  N    I     A+++   ++ D I  L    +      L+ 
Sbjct: 240 SLNPQTFNEKALKAMGRIQNNENLIDLYTQAKDLGFVINMDFILGLLYDDVNNTRENLET 299

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+++ + L+I+ G+ + + +   D     EN+A     L +  TS +    Y +
Sbjct: 300 LRKLQPDNITFHTLSIKNGSKYSQQY---DKENFRENIAEKQMQLVKKWTSQNNYSPYYL 356

Query: 254 SNHSFLGAESLHNLNYWRY-------------GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                    ++ N+ Y +                 IG G  A+S++ +    +  +  K+
Sbjct: 357 YRQ-KNILNNMENIGYCKEIPSRYNIVINEELESIIGFGMTANSKI-IKDGIIKYTNYKN 414

Query: 301 PESWLKMVRK 310
              + + + +
Sbjct: 415 LRDYSEKLDE 424


>gi|163749407|ref|ZP_02156655.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161330816|gb|EDQ01743.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 430

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 155/373 (41%), Gaps = 27/373 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   C +C F+    +  + +E + Q+   E++ +  +      + ++ GGGT
Sbjct: 52  LYIHIPFCHTLCRFCSFHKVKFQESLARE-YFQALRQEIRQV--IAKGYRFNRVYIGGGT 108

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E +    ++  I    ++++  E++ E++P   +  + +  +   V+R+S+GVQS 
Sbjct: 109 TTILEDE----LIKTIELIKSLTTIREVSCESDPIYFKEGHPELLKGL-VDRMSIGVQSF 163

Query: 141 EEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+  GR        +    +  A  +FP ++ D++Y    Q       +L + ++ 
Sbjct: 164 DDAILKITGRFEKFGSGLQQAEYVSRAIELFPTVNVDMMYGFKMQNADTVHADLLQTMAL 223

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D ++ Y LTI  G       K G L  P+  +      + Q++   + +        S
Sbjct: 224 NPDQITTYPLTIGIG---KNRKKAGCLAGPAHELWPQFLAVKQALADRYVMEFPWT--FS 278

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               + + N       D  G+G GA  R        +  I      +++++ +       
Sbjct: 279 RSFGQPVQNKYVLDGEDCFGVGSGAFGRFGEQFSISSFDI----ADYIRLIDQVQSGTCY 334

Query: 318 KEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECERN---LQRQGFIERVQF 373
            + L S+      LM  + +  G +  + ++   GR+L          L   G I + + 
Sbjct: 335 IKPLESKALIQHHLM--IMMGHGHLDNQVFKGHTGRSLWQALPLEMSFLLASGAIVK-RG 391

Query: 374 SRLRCTQRGMTML 386
              R T++G  + 
Sbjct: 392 DNYRTTEQGQFIA 404


>gi|302379634|ref|ZP_07268119.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312541|gb|EFK94537.1| coproporphyrinogen dehydrogenase HemZ [Finegoldia magna
           ACS-171-V-Col3]
          Length = 435

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 133/310 (42%), Gaps = 19/310 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +Y++ PFC  +C YC F + V +    +E ++   L E+  + +      I +I
Sbjct: 120 DEKNYNIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEVSKSIDKYKIKTI 179

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++   +  +L  I + +   + VE T EA    S++    +  +K  V RI
Sbjct: 180 YVGGGTPTSLDYTMLEKLLKAIEECFVSENLVEYTFEAGREDSLDFGKLKLLKKYNVTRI 239

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  E++L+ +GR  N    I     A+++   ++ D I  L    +      L+ 
Sbjct: 240 SLNPQTFNEKALKAMGRIQNNENLIDLYTQAKDLGFVINMDFILGLLYDDVNNTRENLET 299

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+++ + L+I+ G+ + + +   D     EN+A     L +  TS +    Y +
Sbjct: 300 LRKLQPDNITFHTLSIKNGSKYSQQY---DKENFRENIAEKQMQLVKEWTSHNNYLPYYL 356

Query: 254 SNHSFLGAESLHNLNYWRY-------------GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                    ++ N+ Y +                 IG G  A+S++ +    +  +  K+
Sbjct: 357 YRQ-KNILNNMENIGYCKDIPSRYNIVINEELESIIGFGMTANSKI-IKDGIIKYTNYKN 414

Query: 301 PESWLKMVRK 310
              + + + +
Sbjct: 415 LRDYSEKLDE 424


>gi|51893563|ref|YP_076254.1| coproporphyrinogen III oxidase [Symbiobacterium thermophilum IAM
           14863]
 gi|51857252|dbj|BAD41410.1| putative Fe-S oxidoreductase [Symbiobacterium thermophilum IAM
           14863]
          Length = 526

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/334 (20%), Positives = 137/334 (41%), Gaps = 27/334 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           ++  +    G+   ++ +Y+  PFC   C +C F+ + + +++     F+++   EM  +
Sbjct: 178 VARLQRPFLGRDPRAVSLYIGIPFCPSICSFCSFSIYPINQHRDQISPFLEALGREMAII 237

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNI-ALILDGIAKNWTVSSNVEITIE-ANPSSVE 118
            Q        + SI+FGGGTP+    ++   ++           S  E TIE   P +  
Sbjct: 238 GQAIRDLGLRVESIYFGGGTPTSPRDEDFAWMLRTAAETLLKGQSPAEYTIEGGRPETFN 297

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA--RNIFPRMSFDLI 176
                     GV R+S+  Q+  + +L  LGR H   +   A  L         ++ D+I
Sbjct: 298 RYKLDVMAAHGVTRVSVNPQTTVQATLMHLGRIHTVEKFYRAYDLVRSHPAGFTVNTDII 357

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL--VLPSENVAVD 234
             LP +   +    L+     A D+L+++ L +++G+  +     G++   L        
Sbjct: 358 IGLPGEGPAEVHHTLEDMRRLAPDNLTVHTLAVKRGSRIHAAGAAGEVLRALTPAEAEAL 417

Query: 235 LYNLTQSITSAHGLHAY-----------EISNHSFLGAESLHNLNYWRYGDY-IGIGPGA 282
           + +  ++  +      Y           E   ++  G ESL+N+         IG+G GA
Sbjct: 418 VQDAAETARAMGQRPYYLYRQKFMVGSLENVGYALPGKESLYNIQMMEERQTVIGLGGGA 477

Query: 283 HSR----VKVGSHRV--AISIEKHPESWLKMVRK 310
            S+    +  G   +  A +    P+++++ V +
Sbjct: 478 TSKWFKPLGEGRGWLLKAPANPNDPQAYVERVEE 511


>gi|56962277|ref|YP_174002.1| coproporphyrinogen III oxidase [Bacillus clausii KSM-K16]
 gi|56908514|dbj|BAD63041.1| coproporphyrinogen III oxidase [Bacillus clausii KSM-K16]
          Length = 478

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 83/422 (19%), Positives = 166/422 (39%), Gaps = 38/422 (9%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-- 61
           L+   N+  G  +    +Y H P C   C +C++          +E  +  ++  +    
Sbjct: 44  LADLYNHFDG-ANKPTTLYFHVPLCSYICYFCNYVKKYLPQNGKEEEVLDRWVNLLIKES 102

Query: 62  -----MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                         I SI+ GGGT SL++P  +A I+  I +++T++++ EI++E NP +
Sbjct: 103 TSTIGQAPWVTKAKIESIYLGGGTASLMKPHQLAKIVAHIREHYTIANDCEISLEGNPDN 162

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
            + +  +   + G NR S+GVQSLE+  ++ +GR H+   +I AI+         + D+I
Sbjct: 163 YQGDEIEQALEMGFNRFSMGVQSLEDDVIKAVGRKHDRKMSIDAINKLLLSNKPFNVDII 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL- 235
           + LP QT      +++      V  +++Y+L   +     KM      +  ++ V   + 
Sbjct: 223 FGLPHQTANSVARDIEVLCDMGVPTITIYRL---RNADRQKMGIGNVSLWNNDRVREKME 279

Query: 236 -----------YNLTQSITSAHGLHAYEISN---HSFLGAESLHNL-----NYW-RYGDY 275
                      Y + + I      + YE S     S        N+     N W RY   
Sbjct: 280 AEGLFPTLEQTYQMREEILKVFLKYGYEPSPCGWWSRKNTYPEGNIPQISKNKWERYDSM 339

Query: 276 IGIGPGAHSRVKVGSHRVAIS-IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG 334
           I  GPG +  +      +  +        +++ +  +         L+  +     L   
Sbjct: 340 IAYGPGVYGWLNDKEGTILQTHNVSDINRYVERMENDESPSSFGRMLTGNEAISTSLGFN 399

Query: 335 LRLREGISVKDWEMLAGRNL-----DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +  + I +  ++     +L          R+L     + ++   RL  T  G  + + +
Sbjct: 400 YKSNQPIQLSRYQKEFHVDLINDEPYAGVIRSLLESNLLMKLDDDRLLPTLEGEALHEEI 459

Query: 390 IA 391
           I+
Sbjct: 460 IS 461


>gi|86144489|ref|ZP_01062821.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
 gi|85837388|gb|EAQ55500.1| coproporphyrinogen III oxidase [Vibrio sp. MED222]
          Length = 469

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/391 (18%), Positives = 161/391 (41%), Gaps = 23/391 (5%)

Query: 2   KYLSAYENNM--TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           K L  ++  M   G+  +   +Y+H PFC  +C +C+F  +    K+  + +  + + E+
Sbjct: 44  KKLEIFDELMLSEGKKQDKRCLYIHIPFCRVRCTFCNFFQNAASRKL-VDEYFDALMVEL 102

Query: 60  QWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
               + +  +S    +++ GGGTP+ + P  + L+   I +++ ++++VE+T+E   +  
Sbjct: 103 MQKAKTSWAQSGLFHAVYIGGGTPTDLSPLQVELLGKAIRQHFPLANDVEMTLEGRINRF 162

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLI 176
               F    + G NR S G+QS   Q  R   R  +    +  I  L+R     +  DL+
Sbjct: 163 GDEMFARSLEGGFNRFSFGIQSFNTQVRRSAKRLDDREVVLERISSLSRTEQAPIVLDLL 222

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDL 235
           Y LP Q+M  ++ +L+  +S     + LYQL +        + + G +  P +      +
Sbjct: 223 YGLPHQSMEVFQQDLEDYMSTGAHGIDLYQLIVSGNAPMLNLVEKGKIPPPANTPDKASM 282

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
           Y       + H +    +++ +    E S++N     Y + + I                
Sbjct: 283 YLAGVEFMAKHKVKQLSVNHWTRDNRERSIYNSLAKTYAEVLPI----GCGAGGNIGGHG 338

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR--LREG-ISVKDWEMLAG 351
           +   +  +S+++ +++    +      SS     E +   L+     G +         G
Sbjct: 339 VMQHRTLDSYMESIKQGQLPIAMMTKQSS----LEPIFSSLKAGFDSGVVRRSTLPSFMG 394

Query: 352 RNLDIECE---RNLQRQGFIERVQFSRLRCT 379
           ++     +    + ++ G ++  +   L  T
Sbjct: 395 QDTFDYLKPLFSHWEKNGLVDLSE-DYLSLT 424


>gi|170727734|ref|YP_001761760.1| coproporphyrinogen dehydrogenase [Shewanella woodyi ATCC 51908]
 gi|169813081|gb|ACA87665.1| Coproporphyrinogen dehydrogenase [Shewanella woodyi ATCC 51908]
          Length = 439

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/389 (18%), Positives = 149/389 (38%), Gaps = 30/389 (7%)

Query: 6   AYENNMTGQGSNSL-GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + E++     S  +  +Y+H PFC   C +C F+       + +E F+ +   E++ +  
Sbjct: 38  SVESDENAIPSKPIETLYIHIPFCHTLCRFCSFHKVKFSEPLAREYFV-ALRQEIREV-- 94

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +      + ++ GGGT +++E +    ++  I     ++   E++ E++P   +  N Q 
Sbjct: 95  IAKGYRFNRVYIGGGTTTILEDE----LIKTIEMIKGLTPIREVSCESDPIYFKEGNPQL 150

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPK 181
                V+R+S+GVQS +++ L+  GR        E    +  A  + P ++ D++Y    
Sbjct: 151 LNGL-VDRMSIGVQSFDDKILKASGRFEKFGSGLEQADYVARAIALIPTVNLDMMYGFKT 209

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSENVAVDLYNLTQ 240
           QT      +L++ L    D ++ Y LTI  G    K     GD              L+ 
Sbjct: 210 QTPESVHWDLKQTLRLKPDQITTYPLTIGIGKNRKKAGSLAGDPHALWPQFLAVKKALSG 269

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                           S    +++ N       D  G+G GA  R        +  I   
Sbjct: 270 RYLMEFPWT------FSRNFGQAVENKYVLDGEDCFGVGSGAFGRFGEQFRISSFDI--- 320

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            + +++++++        + + S       LM+ +     +    +    G+ L      
Sbjct: 321 -QDYIQLIKQQQSGTCYTKQIESSALLQHHLMI-MMGHGRLDNSVFYQHTGKTLWQAF-- 376

Query: 361 NLQRQGFI----ERVQFSRLRCTQRGMTM 385
            L+    I     +   S+   T++G  +
Sbjct: 377 PLEMSYLIGAGAIKKDGSQYVTTEQGQFI 405


>gi|225620187|ref|YP_002721444.1| putative coproporphyrinogen III oxidase [Brachyspira hyodysenteriae
           WA1]
 gi|225215006|gb|ACN83740.1| putative coproporphyrinogen III oxidase [Brachyspira hyodysenteriae
           WA1]
          Length = 351

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 18/313 (5%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGI---AKNWTVSSNV 106
            +I++ + E++          I +I+ GGGTPS++    +  +LD I     N  +++N 
Sbjct: 9   RYIEALILELKLRIS-DYKSEIETIYLGGGTPSVLGADLLKYLLDNILNIVHNKDLNTNF 67

Query: 107 --EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
             EITIE+N + +     +        R+SLG+Q+  E+SL  + R+ +  + I A+ L 
Sbjct: 68  IKEITIESNINDINNEYIKFLENIPNIRLSLGIQTFNEKSLAIINRHTDKKDIIKALKLI 127

Query: 165 RNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVD--HLSLYQLTIEKGTLFYKMHKD 221
                  +S D I  LP  +  Q   ++  +        H SLY L + +      +HK 
Sbjct: 128 NKSSLKNISLDFICGLPLNSENQIVDDILFSYDLLPKLKHFSLYYLELTE-----SLHKK 182

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
              +LPSE  +   Y          G   YE+SN+S     S+HN NYW   DYIGIG  
Sbjct: 183 WKEILPSEEESTIYYKKASDTLEGLGFKRYEVSNYSLPNYNSIHNSNYWLLKDYIGIGVS 242

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           A             S  K    +   + KN   + E E+L  + +  EF+ + LR  +GI
Sbjct: 243 ALGCYND----NRYSNVKMIRDYFDFIDKNKLPIYENEYLDIDIRKKEFIFLSLRTVKGI 298

Query: 342 SVKDWEMLAGRNL 354
           ++  +        
Sbjct: 299 NIDKYNNYFNEVF 311


>gi|294792130|ref|ZP_06757278.1| putative Fe-S oxidoreductase [Veillonella sp. 6_1_27]
 gi|294457360|gb|EFG25722.1| putative Fe-S oxidoreductase [Veillonella sp. 6_1_27]
          Length = 475

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 153/339 (45%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +   ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ 
Sbjct: 139 EYQRPF---LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLRALNRDIED 195

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           M+ +      ++ +++ GGGTP+++E ++   +L  ++         E T+EA  P SV 
Sbjct: 196 MKSIVDSYNLTVDTLYMGGGTPTVLEDEDFHQVLKLLSILVP--EGHEFTVEAGRPDSVN 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               Q   + GVNRIS+  Q++++  LR +GR H+A +    +   +N     ++ D I 
Sbjct: 254 PVKLQSMLELGVNRISINPQTMQDDILRRIGRGHSAWDIDELLQYVKNNTSLAVNMDFIA 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QTM+     +        ++++++ L +++G+  Y +H + D+  P EN+  ++  
Sbjct: 314 GLPNQTMSNMIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDDI--PEENLVAEMVQ 371

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +    A G   Y            E   ++  G    +N+         + +GPG+ S
Sbjct: 372 YGKERLEAAGYVPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQSILSMGPGSSS 431

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + ++   +R     + K  + +   +  + +  H + E+
Sbjct: 432 KWMRAPEYRQLKQHMPKDVDVYHVTIDALLEKRHKICER 470


>gi|294794001|ref|ZP_06759138.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
 gi|294455571|gb|EFG23943.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
          Length = 475

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 150/339 (44%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +   ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ 
Sbjct: 139 EYQRPF---LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLRALTRDIED 195

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           M+ +      ++ +++ GGGTP+++  ++   +L  ++         E T+EA  P SV 
Sbjct: 196 MKAIIESYNLTVDTLYMGGGTPTVLADEDFYQVLKQLSLLVP--EGHEFTVEAGRPDSVN 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +   + GVNRIS+  Q++++  LR +GR H+  +    +   +N     ++ D I 
Sbjct: 254 PTKLRSMLELGVNRISINPQTMQDDILRRIGRGHSVRDVDELLQYVKNNTSLSVNMDFIA 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QTM      +        ++++++ L +++G+  Y +H + D+  P E++  ++  
Sbjct: 314 GLPNQTMPNMIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDDI--PEEHLVAEMVQ 371

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +    A G   Y            E   ++  G    +N+         + +GPG+ S
Sbjct: 372 YGKERLEAAGYLPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQSILSMGPGSSS 431

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + ++   +R     + K  + +   +  + +  H + E+
Sbjct: 432 KWMRAPEYRQLKQHMPKDVDVYHETIDALLEKRHRICER 470


>gi|291458834|ref|ZP_06598224.1| oxygen-independent coproporphyrinogen III oxidase 2 [Oribacterium
           sp. oral taxon 078 str. F0262]
 gi|291418088|gb|EFE91807.1| oxygen-independent coproporphyrinogen III oxidase 2 [Oribacterium
           sp. oral taxon 078 str. F0262]
          Length = 535

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/369 (19%), Positives = 146/369 (39%), Gaps = 61/369 (16%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISS 73
               +YV  PFC  +C YC F S+ +  ++    +++     E++   +      + + +
Sbjct: 169 EGFSLYVGIPFCPTRCLYCSFLSNPISLWEKRIGDYLDCLRREIRAAMEEMSAQGKHLQT 228

Query: 74  IFFGGGTPSLIEPQNIALILDGIAK---NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           ++ GGGTP+ +  + ++ +++ + +      ++   E T+EA  P S+     Q  + AG
Sbjct: 229 VYVGGGTPTALPERWLSALMETLREECFCHPMTELCEFTVEAGRPDSLNREKLQILKDAG 288

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
            +RIS+  QS  +++L  +GR H A +  +A  +AR+  F  ++ DLI  LP + +++  
Sbjct: 289 ADRISVNPQSFRQETLDLIGRRHTAEDVRSAFSMARDAGFSDINMDLIMGLPGEGLSEVT 348

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD------------------------- 223
             L      A D L+++ L +++     +     D                         
Sbjct: 349 ETLSETARLAPDSLTVHSLAVKRAARLREEKPLWDQVYRAGADSTLYRESLNERERNPLC 408

Query: 224 -----------LVLP-SENVAVDLYNLTQSITSAHGLHAY---------EISNHSFLGAE 262
                      L L       +     T S+      + Y         E   ++  G E
Sbjct: 409 RFPEGEGLSRKLCLMSEMERMMKAAEYTASLLGLRPYYLYRQKNMAGNLENVGYAEPGKE 468

Query: 263 SLHNLNYWRYGDYIGIGPGAHS---RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            L+N+        + IG GA S   R+     R      K  + + + + +    + +K 
Sbjct: 469 CLYNILMMEEKHTV-IGCGAGSATKRILPDGRRERCDNGKDIKYYFEKLPE---LIEKKR 524

Query: 320 FLSSEQQAD 328
            L  +++A+
Sbjct: 525 RLLRDEKAE 533


>gi|313893178|ref|ZP_07826755.1| coproporphyrinogen dehydrogenase HemZ [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442531|gb|EFR60946.1| coproporphyrinogen dehydrogenase HemZ [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 475

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 146/339 (43%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +   +T      + +Y   PFC  +C YC F   + +   G+  F+ +   +++ 
Sbjct: 139 EYQRPF---LTDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYNGKSQFLTALGRDIED 195

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           M+ +      ++ +++ GGGTP+++  ++   +L  ++         E T+EA  P SV 
Sbjct: 196 MKAIIQSYGLTVDTLYMGGGTPTVLGDEDFYQVLKQLSILVP--DGHEFTVEAGRPDSVN 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +   + GVNRIS+  Q++++  LR +GR H+A +    +   +      ++ D I 
Sbjct: 254 PAKIRSMLELGVNRISINPQTMQDDILRRIGRGHSARDIDELLQYVKANTSLAVNMDFIA 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QTM      +        ++++++ L +++G+  Y +H   D+  P E++  ++  
Sbjct: 314 GLPHQTMQNMIENMDYICQNLPENVTIHTLALKRGSPLYDLHMQDDI--PEEHLVAEMVQ 371

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +      G   Y            E   ++  G    +N+         + +GPG+ S
Sbjct: 372 YGKERLEEAGYVPYYLYRQQYMSGQLENIGYTLPGKACEYNIQIMEERQSILSMGPGSSS 431

Query: 285 R-VKVGSHRVAIS-IEKHPESWLKMVR---KNGHAVVEK 318
           + ++   +R     + K  + +   +    +  H + EK
Sbjct: 432 KWMRAPEYRQLKQHMPKDVDVYHATIDVLLEKRHRICEK 470


>gi|282850507|ref|ZP_06259886.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282580000|gb|EFB85404.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 475

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 151/339 (44%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +   ++      + +Y   PFC  +C YC F   + +   G+  F+++   +++ 
Sbjct: 139 EYQRPF---LSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYAGKSQFLKALTRDIED 195

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           M+ +      ++++++ GGGTP++++ ++   +L  ++         E T+EA  P SV 
Sbjct: 196 MKAIVQSYNLTVNTLYMGGGTPTVLKDEDFHQVLKQLSLLVP--EGHEFTVEAGRPDSVN 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               +     GVNRIS+  Q++++  LR +GR H+  +    +   +N     ++ D I 
Sbjct: 254 PTKLRSMLALGVNRISINPQTMQDDILRRIGRGHSVRDIDELLQYVKNNTSLAVNMDFIA 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QTM      +        ++++++ L +++G+  Y +H + D+  P E++  ++  
Sbjct: 314 GLPNQTMLNMIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDDI--PEEHLVAEMVQ 371

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +    A G   Y            E   ++  G    +N+         + +GPG+ S
Sbjct: 372 YGKERLEAAGYVPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQSILSMGPGSSS 431

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + ++   +R     + K  + +   +  + +  H + E+
Sbjct: 432 KWMRAPEYRQLKQHMPKDVDVYHETIDALLEKRHRICER 470


>gi|169824932|ref|YP_001692543.1| coproporphyrinogen III oxidase [Finegoldia magna ATCC 29328]
 gi|167831737|dbj|BAG08653.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ATCC 29328]
          Length = 435

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 134/310 (43%), Gaps = 19/310 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +Y++ PFC  +C YC F + V +    +E ++   L E+    +      I +I
Sbjct: 120 DEKNYNIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEASKSIDKYKIKTI 179

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++   +  +L  I + +   + +E T EA    S++ +  +  RK  V RI
Sbjct: 180 YVGGGTPTSLDYTMLEKLLKAIEECFVSENLLEYTFEAGREDSLDFDKLKLLRKYNVTRI 239

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  E++L+ +GR  N    I     A+++   ++ D I  L    +   +  L+ 
Sbjct: 240 SLNPQTFNEKALKAMGRIQNNENLIDLYTQAKDLGFVINMDFILGLLYDDVNNTKKNLEI 299

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+++ + L+I+ G+ + + +   D     EN+A     L +  TS +    Y +
Sbjct: 300 LSRLQPDNITFHTLSIKNGSKYSQRY---DKENFEENIAEKQMQLVKKWTSQNNYSPYYL 356

Query: 254 SNHSFLGAESLHNLNYWRY-------------GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                    ++ N+ Y +                 IG G  A+S++ +    +  +  K+
Sbjct: 357 YRQ-KNILNNMENIGYCKEIPSRYNIVINEELESIIGFGMTANSKI-IKDGIIKYTNYKN 414

Query: 301 PESWLKMVRK 310
              + + + +
Sbjct: 415 LRDYSEKLDE 424


>gi|210612287|ref|ZP_03289235.1| hypothetical protein CLONEX_01436 [Clostridium nexile DSM 1787]
 gi|210151661|gb|EEA82668.1| hypothetical protein CLONEX_01436 [Clostridium nexile DSM 1787]
          Length = 417

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 86/385 (22%), Positives = 154/385 (40%), Gaps = 27/385 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + + Y+  +      +LG+YVH PFC   C +C +   +   K+  + +I S L E+  +
Sbjct: 21  FQNEYDQKLPYSDCQNLGLYVHIPFCRSICNFCPYCKTLYSAKLC-DRYIDSLLHEIHLV 79

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             Q  G +  +S++FGGGTP  +  + I  I+D + +++ ++    I +E +P +V    
Sbjct: 80  GSQHIGRKKATSLYFGGGTP-ALTVERIKEIIDAVQEHFIITEG--IGVELHPDNVTPTV 136

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
            Q  R AGV +IS+G+QS + +    LGR            L+   F  +S D I+ALP 
Sbjct: 137 LQTLRDAGVTKISIGIQSFQNKFQNILGRT-TVDAVKLKETLSEVPFETVSMDFIFALPN 195

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQ 240
           QT    + ++ +A     +H+++Y       T          +  L    V     +   
Sbjct: 196 QTFDDLKSDIDKAFQSGANHIAIYPFIDFAFTSSSVAAMSKKEKQLLLNAVTHYCLDKGY 255

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
             TS         SN       S          +++G G  A + +         S+   
Sbjct: 256 IRTSIWTF-----SNEKKASYSS------MTRDNFLGFGCSAATLLDDQFKINTFSV--- 301

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
            E++ +  ++N          S  Q+   +L         I+ KD+E   G +L      
Sbjct: 302 -EAYCERCKENKLPTSLTTRFSLRQRMLYYLFWTA-YSTKINPKDFENFFGVSLKSVYGI 359

Query: 361 NL---QRQGFIERVQFSRLRCTQRG 382
            L   +  GF+   +      T +G
Sbjct: 360 ELNLAKLLGFLTE-ENGIYTMTLKG 383


>gi|320158229|ref|YP_004190607.1| radical SAM family protein HutW, coproporphyrinogen III
           oxidase-like protein, oxygen-independent, associated
           with heme uptake [Vibrio vulnificus MO6-24/O]
 gi|319933541|gb|ADV88404.1| radical SAM family protein HutW, coproporphyrinogen III
           oxidase-like protein, oxygen-independent, associated
           with heme uptake [Vibrio vulnificus MO6-24/O]
          Length = 459

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 148/373 (39%), Gaps = 21/373 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + + ++ L E+     L   +S    +++ GG
Sbjct: 67  LYIHIPFCRVRCTFCNFFQNAASRQL-VDGYFEALLKEIAIKSALPWTQSGVFHAVYVGG 125

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ + P  +  + + I  ++ +S++ EIT+E   +      + G  K G NR S GVQ
Sbjct: 126 GTPTDLSPTQVRQLGEAIRSHFPLSADCEITLEGRINRFSDEMYDGAMKGGFNRFSFGVQ 185

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S +    R   R  +  + +  +  LA      +  DL+Y LP QT      +L   +S 
Sbjct: 186 SFDTLVRRSAKRLDDREKVLTRLSELASYDQAPVIVDLLYGLPHQTRDILLQDLNDFIST 245

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVDLYNLTQSITSAHGLHAYEISNH 256
               L LYQL +        + + G L  P +      +Y +  +    H L    +++ 
Sbjct: 246 GAHGLDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASMYEIGVNFMRQHHLKQLSVNHW 305

Query: 257 SFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +    E SL+N     Y + + I                +   +  ++++  +      +
Sbjct: 306 ATDNRERSLYNSLAKTYAEVLPI----GCGAGGSIGGYGMMQHRSLDAYMAAINHGQLPL 361

Query: 316 VEKEFLSSEQQADEFLMMGLR--LREGISVKD-WEMLAGR---NLDIECERNLQRQGFIE 369
           +      ++Q   E     L+     G+ + D      G    +      R  Q +G +E
Sbjct: 362 MMM----TQQHPLEATFAALKSGFDRGVVMADKLPEFMGDNVFDFLQPLFRLWQERGLVE 417

Query: 370 RVQFSRLRCTQRG 382
             + S    T  G
Sbjct: 418 LNERSA-TLTLAG 429


>gi|169794848|ref|YP_001712641.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AYE]
 gi|332852302|ref|ZP_08434107.1| radical SAM domain protein [Acinetobacter baumannii 6013150]
 gi|332870525|ref|ZP_08439289.1| radical SAM domain protein [Acinetobacter baumannii 6013113]
 gi|169147775|emb|CAM85638.1| putative Oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AYE]
 gi|332729432|gb|EGJ60772.1| radical SAM domain protein [Acinetobacter baumannii 6013150]
 gi|332732262|gb|EGJ63530.1| radical SAM domain protein [Acinetobacter baumannii 6013113]
          Length = 469

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 157/401 (39%), Gaps = 36/401 (8%)

Query: 12  TGQGSNSLGVYVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           T     S+ +Y+  P+C       C +C F +   + K   + ++     E    ++   
Sbjct: 54  TDAQYKSINLYLGIPYCIPTDPPHCGFCLFPTQDYKGKREMDFYLDFLSREAHLYKEFYQ 113

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT---VSSNVEITIEANPSSVEVNNFQG 124
              + S++ GGGTP+L++P +   +   ++  +    +SS +E+T+E  P     +  + 
Sbjct: 114 GAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTLEGIPQLFNEDKIRA 173

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            + AG NR+S+GVQ + ++ +   GR     +   AI L        + DLIY  P QT+
Sbjct: 174 IKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLSCNVDLIYGWPNQTV 233

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +L+  +   + H++ Y+L I   + F    K      PS    +++YN+ +    
Sbjct: 234 EAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQ---NTPSIEKKIEMYNIAKQFLI 290

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYI----------------GIGPGAHSRVKV 288
           + G     + +        L +  Y  Y D +                G+G  A +    
Sbjct: 291 SKGYKQKTVYDWEKEDNNQLISEKY-LYEDNLRDCLDANGQSKMTTMSGLGYAAVNMRLQ 349

Query: 289 GSHRVAIS----IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +     S      ++   +   +  N   V       +E     ++   L+  + I+ K
Sbjct: 350 PNSSSIKSVSAMNHRNLTEYYNAISLNKLPVERMFVHDTEDVKLIWIFQALQEMK-INTK 408

Query: 345 DWEMLAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRG 382
            +E +   ++ ++ +     L  +G++E      ++    G
Sbjct: 409 KYEKIFNSDIKLDYKPIWDALVEEGWVEHND-EYIKLINEG 448


>gi|219668032|ref|YP_002458467.1| HemN domain protein [Desulfitobacterium hafniense DCB-2]
 gi|219538292|gb|ACL20031.1| HemN domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 368

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 155/379 (40%), Gaps = 25/379 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +S+ V+V+ PFC+++      +SH+R   K  +  ++++   E+    +L   +++ SI+
Sbjct: 2   SSVTVFVNIPFCIRRRR--GESSHIRPAGKETRNAYLEALEREIDHAGELLAGKTVQSIY 59

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGG  +++ P  +A +L    + + ++  +E+TI A P ++      G      NRIS+
Sbjct: 60  VGGGAATVLSPDKLARLLLRFKRAYQMAEYLELTIAAAPETLVSPCLSGLNMCNFNRISV 119

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
                 ++ L +LG ++  ++    + +     +  ++ D++Y +P QT       L   
Sbjct: 120 EALCASDKMLDYLGTSYRLADLEDGLTMLGMFKYRNVNADVMYGIPGQTKAALRNSLVTC 179

Query: 195 LSYAV-DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L+     H++L            K  +  +    S     D Y  +       G   Y  
Sbjct: 180 LALPALSHITL------------KRFELPEQEGVSAEECRDQYRYSLEYLKGKGFCQYAA 227

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
            + +  G E  H     +  D+IG G GA S V        I+       +LK   +   
Sbjct: 228 GHFAKKGYECRHFYYTCQGMDHIGFGVGAKSYVDG----YGITNTTDLAKYLKWAGQYEE 283

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIER 370
                 +L  + +   F  + L+L EG S +++    G           + L +Q FI  
Sbjct: 284 ITENVLYLDEKARQKRFAALRLQLAEGFSEEEFAARFGEGAGAAMGPSLQLLLKQSFISC 343

Query: 371 VQFSRLRCTQRGMTMLDSV 389
           +   R   T+ G+  +D +
Sbjct: 344 LD-GRYVPTEEGLFHIDEI 361


>gi|213157825|ref|YP_002320623.1| coproporphyrinogen III oxidase [Acinetobacter baumannii AB0057]
 gi|213056985|gb|ACJ41887.1| coproporphyrinogen III oxidase [Acinetobacter baumannii AB0057]
          Length = 463

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 157/401 (39%), Gaps = 36/401 (8%)

Query: 12  TGQGSNSLGVYVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           T     S+ +Y+  P+C       C +C F +   + K   + ++     E    ++   
Sbjct: 48  TDAQYKSINLYLGIPYCIPTDPPHCGFCLFPTQDYKGKREMDFYLDFLSREAHLYKEFYQ 107

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT---VSSNVEITIEANPSSVEVNNFQG 124
              + S++ GGGTP+L++P +   +   ++  +    +SS +E+T+E  P     +  + 
Sbjct: 108 GAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTLEGIPQLFNEDKIRA 167

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            + AG NR+S+GVQ + ++ +   GR     +   AI L        + DLIY  P QT+
Sbjct: 168 IKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLSCNVDLIYGWPNQTV 227

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +L+  +   + H++ Y+L I   + F    K      PS    +++YN+ +    
Sbjct: 228 EAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQ---NTPSIEKKIEMYNIAKQFLI 284

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYI----------------GIGPGAHSRVKV 288
           + G     + +        L +  Y  Y D +                G+G  A +    
Sbjct: 285 SKGYKQKTVYDWEKEDNNQLISEKY-LYEDNLRDCLDANGQSKMTTMSGLGYAAVNMRLQ 343

Query: 289 GSHRVAIS----IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +     S      ++   +   +  N   V       +E     ++   L+  + I+ K
Sbjct: 344 PNSSSIKSVSAMNHRNLTEYYNAISLNKLPVERMFVHDTEDVKLIWIFQALQEMK-INTK 402

Query: 345 DWEMLAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRG 382
            +E +   ++ ++ +     L  +G++E      ++    G
Sbjct: 403 KYEKIFNSDIKLDYKPIWDALVEEGWVEHND-EYIKLINEG 442


>gi|260890330|ref|ZP_05901593.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
 gi|260859950|gb|EEX74450.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Leptotrichia hofstadii F0254]
          Length = 454

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 82/397 (20%), Positives = 162/397 (40%), Gaps = 34/397 (8%)

Query: 5   SAYENNMTGQGSNSLG-VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +     M     N LG +YVH P+C K C +C+ N    +     E++    ++E +   
Sbjct: 49  AELLERMEKPAENELGTIYVHTPYCDKICSFCNLNRQ--QIDNDLEDYTNFLVSEFEKYG 106

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                  + I+ IFFGGGTP++ +   +  IL  I  N+T++ + E T+E    ++    
Sbjct: 107 KTPYMKSKKINVIFFGGGTPTIYKEHQLERILKAINDNFTLTDDCEFTLETTLHNLNPKK 166

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            +   K GVNR+S+G+Q+  ++    L R  +  E +  +   +  F   +  D+IY  P
Sbjct: 167 IKILEKGGVNRLSVGIQTFSDRGRNILNRTFSKEETVKRLRNLKESFSGMVCTDIIYNYP 226

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +T+ +   + +      +D  S Y L I +G+   K  ++  L L  E      + L  
Sbjct: 227 DETVEEVLEDARIVKELKIDSTSFYSLMIYEGSQMSKDIRNNTLELNYELEK--DFELHD 284

Query: 241 SITSAHGL-HAYEISNHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGSHRVAI 295
           +   +      YE+  H+ +  +      Y R      D + IG GA  ++         
Sbjct: 285 AFLKSMLEGGEYEVMEHTKIVRKGRDEYRYIRNTHQGKDILPIGVGAGGKID-------- 336

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
               + E +     K  +A+   E   +E +     + GL     +     +      + 
Sbjct: 337 ----NFEIFRLSQDKAFYAISSDE---NEMKMKR--ISGLLQYPKVYFDKLKEYVSDEMF 387

Query: 356 IECER---NLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            E  +   N +++G++ ++  +    T  G+   +++
Sbjct: 388 YEIYKIFENFEKKGYL-KIHETHTELTPEGIFWGNNI 423


>gi|89893650|ref|YP_517137.1| hypothetical protein DSY0904 [Desulfitobacterium hafniense Y51]
 gi|89333098|dbj|BAE82693.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 384

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 79/386 (20%), Positives = 158/386 (40%), Gaps = 25/386 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGP 68
            M     +S+ V+V+ PFC+++      +SH+R   K  +  ++++   E+    +L   
Sbjct: 11  WMEAVPMSSVTVFVNIPFCIRRRR--GESSHIRPAGKETRNAYLEALEREIDHAGELLEG 68

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +++ SI+ GGG  +++ P  +A +L    + + ++  +E+TI A P ++      G    
Sbjct: 69  KTVQSIYVGGGAATVLSPDKLARLLLRFKRAYQMAEYLELTIAAAPETLVSPCLSGLNMC 128

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQW 187
             NRIS+      ++ L +LG ++  ++    + +     +  ++ D++Y +P QT    
Sbjct: 129 NFNRISVEALCASDKMLDYLGTSYRLADLEDGLTMLGMFNYRNVNADVMYGIPGQTKAAL 188

Query: 188 EMELQRALSYAV-DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              L   L+     H++L            +  +  +    S   + D Y  +       
Sbjct: 189 RNSLVTCLALPALSHITL------------RRFELSEQEGVSAEESRDQYRYSLEYLKGK 236

Query: 247 GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
           G   Y   + +  G ES H     +  D+IG G GA S V        I+       +LK
Sbjct: 237 GFCQYAAGHFAKKGYESRHFYYTSQGMDHIGFGVGAKSYVDG----YGITNTTDLAKYLK 292

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQ 363
              +         +L  + +   F  + L+L EG S +++    G           + L 
Sbjct: 293 WAGQYEEITENVLYLDEKARQKRFAALRLQLAEGFSEEEFAARFGEGAGAAMGPSLQLLL 352

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSV 389
           +Q FI  +   R   T+ G+  +D +
Sbjct: 353 KQSFISCLD-GRYVPTEEGLFQIDEI 377


>gi|288941408|ref|YP_003443648.1| coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
 gi|288896780|gb|ADC62616.1| Coproporphyrinogen dehydrogenase [Allochromatium vinosum DSM 180]
          Length = 467

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 85/392 (21%), Positives = 143/392 (36%), Gaps = 27/392 (6%)

Query: 9   NNMTGQGSNSLGV-YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QL 65
             MT    +   V Y+H PFC   C +C F  +      G   + ++ +  ++  R    
Sbjct: 56  TEMTSAARSGKSVAYLHIPFCESHCLFCGFYQNTWHESAGAV-YAEALVEHLKRDRDRPY 114

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                I +++ GGGTP+L+  + +A ++    ++  ++ + EIT+E     +E +  Q  
Sbjct: 115 QAEGPIQAVYVGGGTPTLLSTRELARVITAAREHLPLAPDCEITVEGRARDLEPDKAQAL 174

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTM 184
             AGVNR+S+GVQS ++   R LGR       +  +  L       +  DLIY LP QT 
Sbjct: 175 FDAGVNRLSIGVQSFDQDVRRRLGRRTERGTLLRRLEDLVAADRGAVIVDLIYGLPGQTP 234

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             WE +++ A+   +D L LY L +   T      + G L   +       Y     +  
Sbjct: 235 EVWEEDVRTAIGLGLDGLDLYALKLMPQTPLAIAARAGKLEPAAVESHGAFYARGAELMD 294

Query: 245 AHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGA-----HSRVKVGSHRVAISIE 298
                    S+      E +L+NL          I  GA      +         +  I 
Sbjct: 295 EARWEPLSSSHWRRSTRERNLYNLE---------IKAGAQCLAFGAGAGGCLGGHSYRIL 345

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL---MMGLRLREGISVKDWEMLAGRNLD 355
                + + VR     +     LS      + +   +   RL +           G +L+
Sbjct: 346 ADVAEYAEYVRPGRPLLGGLMRLSPHHGLLDGIKGGLERGRLDQWALADRLATTTGLDLE 405

Query: 356 I---ECERNLQRQGFIERVQFSRLRCTQRGMT 384
                     Q  G + R     L  T  G  
Sbjct: 406 QVAGPLLDQWQGAGLLTR-DGRWLELTLAGRF 436


>gi|34556564|ref|NP_906379.1| coproporphyrinogen III oxidase [Wolinella succinogenes DSM 1740]
 gi|34482278|emb|CAE09279.1| PUTATIVE OXIDOREDUCTASE [Wolinella succinogenes]
          Length = 453

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/394 (19%), Positives = 151/394 (38%), Gaps = 29/394 (7%)

Query: 2   KYLS----AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT 57
           KYLS      +     +      +Y H PFC   C YC FN  +   +     + +S   
Sbjct: 51  KYLSLRPIDRDRLPAPREGKHYLLYAHVPFCSTLCTYCTFNRFLF-EEEKARRYFRSLRQ 109

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           EM+   +L       S++ GGGT S++    +   +D   + + +    E++ E++P+++
Sbjct: 110 EMKMAYEL--GYRFDSMYVGGGTTSIL-VDELCATIDLARELFPLK---EVSCESDPNNI 163

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFD 174
           +       +   V+RIS+GVQS ++  L+ +GR        E ++ +       P ++ D
Sbjct: 164 DKETMAHLKGR-VDRISVGVQSFDDDILKRVGRYEKFGGGEETLSKLQALMGALPVVNID 222

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           LI+  P Q       +L+     +   ++ Y L              GD+ L   +    
Sbjct: 223 LIFNFPTQDEKMLRRDLEIIKRLSPTQVTAYPLMSSPSVKSLIKRSIGDISL---DKEAT 279

Query: 235 LYNLTQSITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV 293
           LY +   I         +IS+ +F    + + +     + +Y+GIG G+ S +    +  
Sbjct: 280 LYRV---ILEELLGEYNQISSWAFSKKGDDIIDEYVVNHDEYVGIGSGSFSFLDGVLYTN 336

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             S     + +   +      +          Q    LM+GL    G+  + +       
Sbjct: 337 TFS----LKEYATRIESGKMGLSRARKYGRLSQMQYRLMVGL-FGGGVHKESFSRQFKMP 391

Query: 354 LDIECERNL--QRQGFIERVQFSRLRCTQRGMTM 385
           +++   + L   R     R +   L  T +G  +
Sbjct: 392 IEVGLFKELLFLRCAGAIREKEGVLYPTLKGKYL 425


>gi|312898876|ref|ZP_07758264.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310620038|gb|EFQ03610.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 481

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 132/315 (41%), Gaps = 24/315 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPR--SI 71
           +    +YV  P+C   C YC F S +   +  +   +F    + ++Q +++L       I
Sbjct: 154 TRDAALYVGIPYCASHCLYCSFPSRLVGNEKAERLLDFTNKLIEDIQDVQRLCSDTGIRI 213

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            SI+ GGGTP+ +  + +  I+  +       +  E T+EA  P ++     +  R  GV
Sbjct: 214 DSIYVGGGTPTSLSVEAVERIMSALQPLAG--ACREWTVEAGRPDTMTEEKARILRAYGV 271

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEM 189
           +RIS+  Q++++  L  LGR H   +        R+     ++ D I  LP QT+     
Sbjct: 272 DRISINPQTMQQHLLDALGRRHTVRDIYRMFDYCRDAGFSVINTDFIAGLPGQTVEDMRQ 331

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L+     A ++++++ L ++KG   ++        +P   V  ++    +      G  
Sbjct: 332 NLEAVCQLAPENVTIHTLALKKGAPLFR--HTLREEIPPVQVVEEMVTSAEESLCRQGYA 389

Query: 250 AYEISNHSFLGAE------------SLHNLNYWRYGDY-IGIGPGAHSRVKVGSHRVAI- 295
            Y +    ++ AE            S +N+         +G+GPG+ ++  V   ++   
Sbjct: 390 PYYLYRQQYMAAEFANIGYAKDGTISRYNIEMMEERQTVLGVGPGSATKFIVPHRKMEKM 449

Query: 296 SIEKHPESWLKMVRK 310
            + K    + + + +
Sbjct: 450 YMPKDIGQYTEALTE 464


>gi|299144027|ref|ZP_07037107.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518512|gb|EFI42251.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 460

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 27/313 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             NS  +YVH PFC  KC YC F + ++  K   + ++   + ++    +        SI
Sbjct: 144 NKNSYSIYVHIPFCPSKCSYCSFQT-LKLNKDVIKKYVDKLICDLINESKYFKNPP-RSI 201

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ I+   +  IL  I K + ++   E T+E   P ++  +     +   VNRI
Sbjct: 202 YIGGGTPTSIDIYYLESILKTILKYYGIAD--EFTVECGRPDTINFDVLNMLKYNKVNRI 259

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQ 192
           S+  QS+ E++L  +GRNH  SE   + +LAR   F  ++ DLI  LP++     E  + 
Sbjct: 260 SINPQSMREKTLDLIGRNHTISEIYNSYNLARKVGFNSINMDLIIGLPQEKYNDVEYSID 319

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY- 251
           + L    ++++++ L I+ G+  Y      D  +   +    +  +T+      G + Y 
Sbjct: 320 KILELNPENITVHTLAIKNGSEIY------DKNIKLSSNIDSIIEMTKDKLKIKGYNPYY 373

Query: 252 -----------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRVAISIE- 298
                      E   +S  G ES++N+         IG G  + +++         +I  
Sbjct: 374 MYRQKRMLGNGENIGYSKNGFESIYNILIMEEKHSIIGFGMSSSTKIYYPDENKLKTIMN 433

Query: 299 -KHPESWLKMVRK 310
            ++ + +L    +
Sbjct: 434 FRNMKDYLSREDE 446


>gi|256846489|ref|ZP_05551946.1| coproporphyrinogen oxidase [Fusobacterium sp. 3_1_36A2]
 gi|256718258|gb|EEU31814.1| coproporphyrinogen oxidase [Fusobacterium sp. 3_1_36A2]
          Length = 469

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 146/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMADVKEFTFEAGREDSLNI 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+ I   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKIGFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y +D+L+++ L  ++ +  +K  +  +  +    +        
Sbjct: 312 PEETTEEILNTLSQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNIIDRALIEKYIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKAMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|301597997|ref|ZP_07243005.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB059]
          Length = 402

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 154/391 (39%), Gaps = 35/391 (8%)

Query: 12  TGQGSNSLGVYVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           T     S+ +Y+  P+C       C +C F +   + K   + ++     E    ++   
Sbjct: 17  TDAQYKSINLYLGIPYCIPTDPPHCGFCLFPTQDYKGKREMDFYLDFLSREAHLYKEFYQ 76

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT---VSSNVEITIEANPSSVEVNNFQG 124
              + S++ GGGTP+L++P +   +   ++  +    +SS +E+T+E  P     +  + 
Sbjct: 77  GAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTLEGIPQLFNEDKIRA 136

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            + AG NR+S+GVQ + ++ +   GR     +   AI L        + DLIY  P QT+
Sbjct: 137 IKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLSCNVDLIYGWPNQTV 196

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +L+  +   + H++ Y+L I   + F    K      PS    +++YN+ +    
Sbjct: 197 EAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQ---NTPSIEKKIEMYNIAKQFLI 253

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYI----------------GIGPGAHSRVKV 288
           + G     + +        L +  Y  Y D +                G+G  A +    
Sbjct: 254 SKGYKQKTVYDWEKEDNNQLISEKY-LYEDNLRDCLDANGQSKMTTMSGLGYAAVNMRLQ 312

Query: 289 GSHRVAIS----IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +     S      ++   +   +  N   V       +E     ++   L+  + I+ K
Sbjct: 313 PNSSSIKSVSAMNHRNLTEYYNAISLNKLPVERMFVHDTEDVKLIWIFQALQEMK-INTK 371

Query: 345 DWEMLAGRNLDIECE---RNLQRQGFIERVQ 372
            +E +   ++ ++ +     L  +G++E   
Sbjct: 372 KYEKIFNSDIKLDYKPIWDALVEEGWVEHND 402


>gi|306821793|ref|ZP_07455388.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304550160|gb|EFM38156.1| oxygen-independent coproporphyrinogen III oxidase 2 [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 477

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 129/310 (41%), Gaps = 13/310 (4%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWM 62
           +S  +  +  +    + +Y+  PFC  +C YC F S  + + K   ++++++   E++  
Sbjct: 147 ISDIQEEIISRLDKKISLYISIPFCPSRCNYCSFFSMDINKGKKFVDDYLKNLEIEIRHT 206

Query: 63  R--QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
              Q    + ISSI+ GGGTPS ++   +      I  N+ +    E T EA    +++ 
Sbjct: 207 LSMQYFKDKKISSIYVGGGTPSSLDYDELRRFFKIIKDNFNIDDIDEFTFEAGRVDTLDE 266

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
              +   +  V+RIS+  Q++ + +   +GRNHN+ +      LAR I F  ++ DLI  
Sbjct: 267 EKLRIIFQNKVSRISINPQTMNDITFGRIGRNHNSKDVREIFTLARQIGFDNINMDLIMG 326

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-------LVLPSENV 231
           L  +++      +   +    + ++++ L +++ +         D       +   +E +
Sbjct: 327 LTGESIDDMRYSVDEIVKLDPESITVHCLAVKRASDINTKKIKTDNLQISDLMQEINEKL 386

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGS 290
               Y         + L   E   +       L+N+         IG G G+ +++    
Sbjct: 387 QTKGYEPYYLYRQKNMLENGENIGYCKKERYGLYNVAMMDEIQTIIGFGAGSSTKILDEK 446

Query: 291 HRVAISIEKH 300
             +   +  +
Sbjct: 447 TNLISRVPNY 456


>gi|331018492|gb|EGH98548.1| HemN family oxidoreductase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 198

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +A++ A  HLS YQLT+E  T+F+         LP +++  D+    Q + +  G   YE
Sbjct: 1   QAIALAPTHLSWYQLTLEPNTVFWNQPPV----LPEDDILWDIQETGQQLLATQGYAQYE 56

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKN 311
           +S ++  G  + HNLNYW +GD+IGIG GAH ++     R+  + + + P+ +L     +
Sbjct: 57  VSAYAQPGKPARHNLNYWAFGDFIGIGAGAHGKLSHPDGRIIRTWKTRLPKDYL---NPD 113

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIE 369
                  + L  ++   EFLM  LRL  G+    +    G +LD   E  R  +++G + 
Sbjct: 114 KPFQAGSKLLPLDELPFEFLMNALRLTNGVDAALFRERTGLSLDSLAEARRQAEQKGLLH 173

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
               +RL  T +G   L+ ++    +
Sbjct: 174 E-DPARLIATPQGQLFLNDLLQYFLI 198


>gi|7416777|dbj|BAA94026.1| ORF468 [Rubrivivax gelatinosus]
          Length = 468

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 147/406 (36%), Gaps = 29/406 (7%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A    +  +    L V    PFC   C  CD +    +     ++++   + E++ + Q
Sbjct: 59  EAALRGLADRPDEPLAVSARVPFCAAHCFCCDRDIRAAQPDEVIDDYVAGLVEEIREVAQ 118

Query: 65  -LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L G R +     GGGT S +    +A ++  +   W + ++++++ E +P  V    F+
Sbjct: 119 VLGGRRELLQFHLGGGTASELTGSQLARLVQAMQSQWRMPADIDMSCECDPRRVSQTMFE 178

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQ 182
             R  G  R+SLGV  L+    + +GR  +A+       LAR+     ++ DL+  LP+Q
Sbjct: 179 VLRGLGFRRVSLGVLDLDPNVQQAIGRRQSAALIDDVCELARSAGIEYINLDLMIGLPRQ 238

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           TM  W   + R ++   + + L +    +              LPS  +  +L   +  +
Sbjct: 239 TMASWCATVDRLIAMGPERIRLARYR-HQPWHAPAQVAIDTESLPSPALMAELARASAEM 297

Query: 243 TSAHGLHAYEISNH-------SFLGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGS 290
               G                S    +     +   Y        IG+G GA   +    
Sbjct: 298 LRNAGYRWIGADQFVLEHDELSRAMDDGRLRRSLISYTAAPATPMIGLGVGAVGEIDGAM 357

Query: 291 HRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD---WE 347
                S      +W   +R     V +    + E       +  L     ++  D    E
Sbjct: 358 FWNDGS----QAAWRNALRHLHLPVSQARPATPESVQRRAAVERLLCTLELAAADAVGLE 413

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              GR          + +G + RV   R+  T+ G   L ++  +L
Sbjct: 414 DGYGR------LAAREAEGLV-RVLDDRIVVTEAGRHALHALCTDL 452


>gi|294675708|ref|YP_003576323.1| oxygen-independent coproporphyrinogen-III oxidase [Rhodobacter
           capsulatus SB 1003]
 gi|294474528|gb|ADE83916.1| oxygen-independent coproporphyrinogen-III oxidase-1 [Rhodobacter
           capsulatus SB 1003]
          Length = 460

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 5/275 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           + ++  M    S     YVH PFC   C +C F  +  R  +G  +++ + + +++   +
Sbjct: 52  ATWDRLMATPRSRRAVAYVHIPFCENHCLFCGFYQNAWRPDLG-TSYVDALIAQLRGFAR 110

Query: 65  LTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                   + +++ GGGTP+ +   +IA ++  +  +  ++ + EIT+E    S  +   
Sbjct: 111 HPAQEGPPLQAVYLGGGTPTALSAPDIARLVRALRSHLPLAPDCEITLEGRVHSFGLEKA 170

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPK 181
           +    AGV RISLGVQS  +   R LGR  + +E + A+  L       +  DLIY LP 
Sbjct: 171 RAAFDAGVTRISLGVQSFSDAIRRPLGRKASRAEILQALQGLVTLDQGAVIVDLIYGLPG 230

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q+      +++      +D L LY L +  GT      + G   + + +     +   ++
Sbjct: 231 QSPEDVAADVRLCADLGLDGLDLYALNLIPGTPLLTAIEKGKKQVAAPDRLGHFFAAGEA 290

Query: 242 ITSAHGLHAYEISNH-SFLGAESLHNLNYWRYGDY 275
                G      S+    L   S++NL      D 
Sbjct: 291 AAEEMGWRPISTSHWQGSLRERSVYNLAVKSGADC 325


>gi|257469997|ref|ZP_05634089.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064223|ref|ZP_07928708.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689899|gb|EFS26734.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 422

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/392 (20%), Positives = 160/392 (40%), Gaps = 34/392 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSIS 72
            S    +YVH P+C K C +C+ N   ++     +++ Q    E     Q          
Sbjct: 45  DSRKKAIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYIADEFDKYGQTNYFKKSEFE 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            IFFGGGTP++ +P  + +IL+ I KN T++ + E T E    ++     +   K GVNR
Sbjct: 103 VIFFGGGTPTVYKPHQLEIILESIKKNVTLAEDYEFTFETTLHNLTEEKLEVMMKYGVNR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
           +S+G+Q+  ++   F  R +   E +  +   +  F   +  D+IY  P +T+ +   + 
Sbjct: 163 LSVGIQTFSDRGRVFYNRTYGKEEVVERLKKLKAFFKGDVCVDIIYNFPDETLEEVIEDA 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLH 249
           +      +   S Y L +  G+   K  +   + L    +   +   +    +      H
Sbjct: 223 RLVKELELSSASFYSLMVHDGSKLSKDIEAEKVKLEEDMKKDYLLYQHFVDEMLREDKYH 282

Query: 250 AYEISNHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESW 304
             E++  +    +   N  Y +     GD   IG GA   V  VG +R+   +  + +  
Sbjct: 283 VLELTKIAKNDGD---NYKYIKVRNTGGDTFPIGVGAGGSVNGVGVYRMNKEMSFYSKQ- 338

Query: 305 LKMVRKNGHAVVEKEFLSSEQQADEF-LMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
                         E  S      +F ++    +++ +S ++++         E  ++ Q
Sbjct: 339 ----------TDYHERFSRLSGFMQFPVINKADVKDILSEEEYKHF------AEKMKDYQ 382

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +G +   + S    TQ G+   +++ +++ +
Sbjct: 383 SKGLLNEKEDS-FVLTQDGIFWGNNISSDIII 413


>gi|257452276|ref|ZP_05617575.1| coproporphyrinogen III oxidase [Fusobacterium sp. 3_1_5R]
 gi|257465924|ref|ZP_05630235.1| coproporphyrinogen III oxidase [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917080|ref|ZP_07913320.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317058819|ref|ZP_07923304.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684495|gb|EFS21330.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313690955|gb|EFS27790.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 472

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/308 (21%), Positives = 136/308 (44%), Gaps = 18/308 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           +YV  PFC  KC YC F S+     VG+  + F+ +   E+++  +     P+ I S++F
Sbjct: 146 LYVGIPFCPTKCSYCSFASYEISGGVGRYYKEFVNTLEKEIRFTGEQLRKQPQQIESVYF 205

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS +  +++  IL    +    S   E T EA    S+ +   +  +K GV+R+SL
Sbjct: 206 GGGTPSTLTEEDLERILKVFREEIDFSFVREFTFEAGREDSITLKKLEILKKYGVDRVSL 265

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
             Q+ +E++L  + R  N           + +   ++ D I  LP++T       L++  
Sbjct: 266 NPQTFQEKTLARVHRKFNRRHFEEVYEDCKRLGFILNMDFILGLPEETTEDILDTLEQLK 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH------ 249
            + V++++++ L  ++ +   K  ++ + +   +        + +     + L+      
Sbjct: 326 QFDVENITIHSLAFKRASKLAKGSQEREEIDRKKIEEKISSLMREKKLEPYYLYRQKNML 385

Query: 250 -AYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV-----KVGSHRVAISIEKHPE 302
              E   ++ +G ES+ N+       + I +G G  S+V         +       K P 
Sbjct: 386 DWGENIGYAKIGMESIFNMEMIEENQNTIALGGGGISKVVVEEENGHDYIERFVNPKDPA 445

Query: 303 SWLKMVRK 310
            +++ + +
Sbjct: 446 LYIREMEE 453


>gi|332992781|gb|AEF02836.1| coproporphyrinogen III oxidase [Alteromonas sp. SN2]
          Length = 365

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/354 (18%), Positives = 134/354 (37%), Gaps = 25/354 (7%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           M   + L   + + ++  GGG+PS +       ++  I K++ +SS  E +IE +P +V 
Sbjct: 1   MVAKKSLYKDKKVVALHLGGGSPSFLSTIQHTYLMYLIKKHFLISSEAEFSIELDPRNVT 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIY 177
               +   + G  R+S GVQ +     + + R  + +     +  A+NI    ++ DLIY
Sbjct: 61  CEYLKDLNELGYTRVSFGVQDINVDVQQSINRVQSTAHIAKLVFDAKNIGYTSVNLDLIY 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LPKQTM ++   +    + + D +SL+         F    K     L + +    ++ 
Sbjct: 121 GLPKQTMEKFRTTVVAVKAMSPDRVSLFSYAHLPD-RFAAQRKIPLDTLATPDEKAAMHQ 179

Query: 238 LTQSITSAHGLHAYEISNHSFLG---AESLHN----LNYWRYG-----DYIGIGPGAHSR 285
           +     S  G     + + +      A + HN     N+  Y      D +G+G  A S 
Sbjct: 180 MAVESFSKTGFEMIGLDHFAKPSDTLAMAKHNHVLHRNFQGYTTHKNSDLLGLGVSAIST 239

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     +      K  + +   +  +         L+ + +    ++M L     +  KD
Sbjct: 240 IGNAYGQN----PKQLKDYYNRLDNDIPLTANGIALTLDDRIRRDVIMSLMCNLYLDKKD 295

Query: 346 WEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            E       +          ++L   G IE ++   +    +    + ++ A  
Sbjct: 296 IEDKYNIKFNGYFCIELTSLKSLVDDGIIE-LRDRYISVPDKSRIYIRAICARF 348


>gi|237744381|ref|ZP_04574862.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229431610|gb|EEO41822.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 411

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 158/391 (40%), Gaps = 30/391 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++     +     
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYEFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + G
Sbjct: 94  EIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    +  +   +  F   +  D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTNEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHG 247
            +         D  S Y L I  G+   K  +    + +       +L+NL  S     G
Sbjct: 214 QDADLLAEVGADSASFYSLMIHDGSNISKEREKDKSVYIYDLERDEELHNLFYSRCIEKG 273

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
               E++  +       +  N     + + IG GA   ++      A ++ +    + K 
Sbjct: 274 YKLLELTKITNGKDSYKYIRNNNGLKNLLPIGVGAGGHIQNIG---AYNMNQQMSFYSKT 330

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQR 364
              N +       LS        ++ GL   +   + + +         +     +  ++
Sbjct: 331 TETNYN-------LS--------MISGLMQFDKFDLDEIKKYCNEESYKIVYRKLKGFEK 375

Query: 365 QGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
           +G+I+ +  F+  +   +G+   +S++A++ 
Sbjct: 376 EGYIKIKNNFAIYQL--KGIFWGNSLVADII 404


>gi|296329187|ref|ZP_06871688.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153543|gb|EFG94360.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 469

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  +S   E T EA    S+  
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNA 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+ +   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y +D+L+++ L  ++ +  +K  +  +  +    +        
Sbjct: 312 PEETTEEILDTLSQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNVIDRALIEKHIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKAMKPYYMYRQKNIIEWGENIGYSKEGRESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|330940667|gb|EGH43685.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 442

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 121/348 (34%), Gaps = 27/348 (7%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNN 121
            L   + +  +  GGGTP+ +    +  ++  +  ++ +    + +  IE +P   + + 
Sbjct: 1   HLAPGQVVEQLHLGGGTPTFLSHDELRRLMAQLRLHFNLLDDDSGDYGIEIDPREADWST 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALP 180
               R+ G NR+SLGVQ L+    R + R  +  E  A +  AR + F  ++ DLIY LP
Sbjct: 61  MGLLRELGFNRVSLGVQDLDPTVQRAINRMQSLEETRAIVEAARTLQFRSVNIDLIYGLP 120

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            Q    +   + + +    D LS++         F    +     LP     + +   T 
Sbjct: 121 TQNPQIFSHTVDKVIDLQPDRLSVFNYAHLPE-RFMPQRRIDVADLPDAESKLLMLERTV 179

Query: 241 SITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYG--DYIGIGPGAHSRVKV 288
                 G     + + +    E            +   Y  +G  D IG+G  A S+V  
Sbjct: 180 EQLGNAGYRYIGMDHFALPDDELATAQEDLTLQRNFQGYTTHGQCDLIGLGVSAISQVGE 239

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
               +          +L+++  +  A       + + +    ++  L     +   + E 
Sbjct: 240 ----LYSQNSSDLNEYLRLLDSDQPATRRGLICNDDDRIRRVIIQQLICHFTLDFGEIEK 295

Query: 349 LAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
               +              +   G I   +   +     G  ++ +V 
Sbjct: 296 TFCIDFRDYFSEAWPQLLGMASDGLITLSETG-IEVRPAGRLLVRAVC 342


>gi|332361347|gb|EGJ39151.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1056]
          Length = 198

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 6/196 (3%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           +     YVH PFC + C YCDF+    + +      + S+L  +         + + +++
Sbjct: 3   TKPTSAYVHIPFCTQICYYCDFSKVFIKNQP-----VDSYLEHLIEEYHSYDIKKLRTLY 57

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+ +  + +A +L+ +     +S   E+TIEANP  ++       + + VNR+SL
Sbjct: 58  IGGGTPTALSARQLAFLLEKLTDKLDLSCLEELTIEANPGDLDQEKIAVLKDSPVNRVSL 117

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           GVQ+  ++ L+ +GR+H   +    I +L +  F  +S DLIYALPKQTM   ++ + +A
Sbjct: 118 GVQTFNDRMLKQIGRSHLEQDIYDNITNLKKVGFDNISIDLIYALPKQTMEDVKINVAKA 177

Query: 195 LSYAVDHLSLYQLTIE 210
           ++  + H+SLY L  +
Sbjct: 178 IALDIPHMSLYSLIWK 193


>gi|262281169|ref|ZP_06058951.1| coproporphyrinogen III oxidase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257400|gb|EEY76136.1| coproporphyrinogen III oxidase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 465

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/396 (18%), Positives = 155/396 (39%), Gaps = 34/396 (8%)

Query: 12  TGQGSNSLGVYVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           T     S+ +Y+  P+C       C +C F +   + K   E ++     E    ++   
Sbjct: 50  TDAKYKSINLYLGIPYCIPTDPPHCGFCLFPTQDYKGKKEMEYYLDFLTKEAHLYKEFYQ 109

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQG 124
              + S++ GGGTP+L++P +   +++ ++  +     S+ +E+T+E  P     +  + 
Sbjct: 110 GAKLESLYVGGGTPNLLQPNDYIKLVNIVSSLFPDVGTSTPIEMTLEGIPQLFNEDKIRA 169

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            ++AG NR+S+GVQ + ++ +   GR     +   AI L        + DLIY  P QT+
Sbjct: 170 IKEAGFNRVSMGVQQVNDELIVTSGRKQTRKQVFDAIELFHKYSLSCNVDLIYGWPNQTI 229

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +L+  +   + H++ Y+L I   + F    K      PS    +++YN+ +    
Sbjct: 230 EAMLGDLESIVQSGIKHITHYELNIAGRSDFATRQKQ---NTPSIEKKIEMYNIAKQFLI 286

Query: 245 AHGLHAYEISNHSFLGAE---SLHNLNYWRYGDYI------------GIGPGAHSRVKVG 289
           + G     + +          S   L      D +            GIG  A +     
Sbjct: 287 SKGYKQKTVYDWEKEDDNQVISEKYLYEDNLRDCLDANGQSKMTTMSGIGYAAVNMRLQP 346

Query: 290 SHRVAIS----IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           +     S      ++   +   +  N   +       +E     ++   L+    I+ K 
Sbjct: 347 NSSEIKSVSAMNYRNLNEYYNAISLNKLPIERMFVHDTEDVKLIWIFQALQEMR-INTKK 405

Query: 346 WEMLAGRNLDIECE---RNLQRQGFIERVQFSRLRC 378
           +E +   ++ ++ +     L  +G++E      ++ 
Sbjct: 406 YEKIFNSDIKLDYKSIWDALVDEGWVEYSD-EYIKL 440


>gi|294784105|ref|ZP_06749406.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 3_1_27]
 gi|294488175|gb|EFG35520.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 3_1_27]
          Length = 469

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/323 (22%), Positives = 143/323 (44%), Gaps = 22/323 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG--PRS 70
               + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +        + 
Sbjct: 142 DKEHINLYIGIPFCPTKCKYCSFASYEITGGVGRFYNDFVEALLKEIQIVGDFLKTYSKK 201

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           +SSI+FGGGTPS +  +++  +L  + +N  +S   E T EA    S+ +   +  +K  
Sbjct: 202 VSSIYFGGGTPSTLTEEDLERVLKKLLENIDMSEVKEFTFEAGREDSLNIKKLEIMKKYS 261

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           V+RISL  QS   ++L+ + R  N          A+ +   ++ DLI  LP +T  +   
Sbjct: 262 VDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGLPDETTEEILD 321

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L +  +Y +D+L+++ L  ++ +  +K  ++ +       +            +    +
Sbjct: 322 TLNQLKNYDIDNLTIHCLAFKRASKLFK--ENQERNSIDRALIEKHIQKIVEEKTMKPYY 379

Query: 250 AY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            Y         E   +S  G ES+ N+       + + +G G  S++ +        IE+
Sbjct: 380 MYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIEERNGIDYIER 439

Query: 300 H-----PESWLKMVRKNGHAVVE 317
           H     P  +++ + K     +E
Sbjct: 440 HVNPKDPALYIRELDKRCKEKIE 462


>gi|237741345|ref|ZP_04571826.1| coproporphyrinogen oxidase [Fusobacterium sp. 4_1_13]
 gi|229430877|gb|EEO41089.1| coproporphyrinogen oxidase [Fusobacterium sp. 4_1_13]
          Length = 469

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMADVKEFTFEAGREDSLNI 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+     ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKSGFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y VD+L+++ L  ++ +  +K  +  +  +    +        
Sbjct: 312 PEETTEEILDTLSQLKDYDVDNLTIHCLAFKRASKLFK--ESQERNIIDRALIEKYIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKAMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|257463863|ref|ZP_05628249.1| coproporphyrinogen III oxidase [Fusobacterium sp. D12]
 gi|317061394|ref|ZP_07925879.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313687070|gb|EFS23905.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 460

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 24/311 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG--PRSISSIFF 76
           +YV  PFC  KC YC F S+     VG+    F+ +   E++   +     P+ I SI+F
Sbjct: 134 LYVGIPFCPSKCSYCSFASYEITGGVGKYYREFVSTLEKEIRLTGEELRRNPQKIESIYF 193

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS +  +++  IL    +        E T EA    S+     +  +K GV+R+SL
Sbjct: 194 GGGTPSTLTEEDLEQILKVFREEIDFRDVKEFTFEAGREDSITRKKLEILKKYGVDRVSL 253

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
             QS +E++L+ + R  N +         + +   ++ D I  LP+++       L++  
Sbjct: 254 NPQSFQEKTLKKVNRKFNRAHFEEVYQDCKKLGFIINMDFILGLPEESTEDMIDSLEQLK 313

Query: 196 SYAVDHLSLYQLTIEKGTLFY----------KMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            + V++++L+ L  ++ +             +   +  +    +   ++ Y L +     
Sbjct: 314 KFEVENITLHSLAFKRASKLAKGSQEREKIDRKRLEESIASLMKEKQLEPYYLYRQ---K 370

Query: 246 HGLHAYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV-----KVGSHRVAISIEK 299
           + L   E   ++ LG ES+ N+       + I +G G  S+V         +       K
Sbjct: 371 NMLDWGENIGYAKLGTESIFNMEMIEENQNTIALGGGGISKVVVEEENGHDYIERFVNPK 430

Query: 300 HPESWLKMVRK 310
            P  +++ + K
Sbjct: 431 DPALYIREMEK 441


>gi|297587319|ref|ZP_06945964.1| possible coproporphyrinogen oxidase [Finegoldia magna ATCC 53516]
 gi|297575300|gb|EFH94019.1| possible coproporphyrinogen oxidase [Finegoldia magna ATCC 53516]
          Length = 435

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/310 (21%), Positives = 134/310 (43%), Gaps = 19/310 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +Y++ PFC  +C YC F + V +    +E ++   L E+  + +      I +I
Sbjct: 120 DEENYNIYINIPFCPSRCDYCSFPTIVYKNNDRREEYLGYLLKEITEVSKNIDKNIIKTI 179

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTP+ ++   +  +L  I   +   + VE T EA    S++ +  +  +K  V RI
Sbjct: 180 YVGGGTPTSLDYTMLEKLLKVIENCFVSENLVEYTFEAGREDSLDFDKLKLLKKYNVTRI 239

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  E++L+ +GR  N    +     A+N+   ++ D I  L    +   E  L+ 
Sbjct: 240 SLNPQTFNEKALKAMGRIQNNENLLDLYTQAKNLGFVINMDFILGLLYDDVNNTEKNLEI 299

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+++ + L+I+KG+ + + +   D     EN+A     L +  T  +    Y +
Sbjct: 300 LRQLQPDNITFHTLSIKKGSKYSQQY---DKGNFKENIAEKQMQLIKKWTFQNNYRPYYL 356

Query: 254 SNHSFLGAESLHNLNYWRY-------------GDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                    ++ N+ Y +                 IG G  A+S++ +    +  +  K+
Sbjct: 357 YRQ-KNILNNMENIGYCKDIPSRYNIVINEELESIIGFGMTANSKI-IKDDIIKYTNYKN 414

Query: 301 PESWLKMVRK 310
              + + + +
Sbjct: 415 LRDYSEKLDE 424


>gi|19704933|ref|NP_602428.1| coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19712832|gb|AAL93727.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 469

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  +S   E T EA    S+  
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNA 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+ +   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLNFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y +D+L+++ L  ++ +  +K  +  +       +        
Sbjct: 312 PEETTEEILDTLSQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNSIDRALIEKNIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKAMKPYYMYRQKNIIEWGENIGYSKEGRESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|222824540|ref|YP_002576114.1| radical SAM domain protein [Campylobacter lari RM2100]
 gi|222539761|gb|ACM64862.1| radical SAM domain protein [Campylobacter lari RM2100]
          Length = 443

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 78/372 (20%), Positives = 163/372 (43%), Gaps = 28/372 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+ +     + +  + +S   E++ ++        +S++ GGG 
Sbjct: 45  LYAHVPFCHTFCPYCSFHKYYYDENLAK-KYFESLREEIKQIKD--KGFDFTSMYVGGG- 100

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI  + +A  L+   K + +    EI+ E++P+ +E    + ++   ++R+S G+QS 
Sbjct: 101 TTLINEEELAKTLELCKKLFNIK---EISCESDPNHIEPKKLEMFKGL-IDRLSCGIQSF 156

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ +L+ + R H   ++ E    +  A  + P MS DLI+  P QT  Q   +L+ A S 
Sbjct: 157 DDDTLKKVARYHKFGSSKELQEKLSKAIGVLPIMSIDLIFNFPSQTKEQLLNDLKIAKSL 216

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN-H 256
               ++ Y L     +   K +    L +  ++   + Y +            YE +N  
Sbjct: 217 KPQQITTYPLM---KSNLTKDNIAKTLGVSFKDNEFEFYKIIIDF-----FKDYERNNAW 268

Query: 257 SFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           SF   +S  N  Y   + +Y+G+G GA S +       A     +   + K++++  +A 
Sbjct: 269 SFSLEKSSFNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYSKLIKEKQNAN 324

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV--QF 373
           + K   S ++    ++ +       I +  +      +L+ +    L      + +  + 
Sbjct: 325 IAKANFSKKEIIK-YVFLTEMFTGKIEIDKFNKTLKCDLEKDLFIELLGLKLSKAIKKEN 383

Query: 374 SRLRCTQRGMTM 385
           + L  ++ G  +
Sbjct: 384 NTLYTSEFGRYL 395


>gi|215482395|ref|YP_002324577.1| Radical SAM superfamily protein [Acinetobacter baumannii
           AB307-0294]
 gi|213988094|gb|ACJ58393.1| Radical SAM superfamily protein [Acinetobacter baumannii
           AB307-0294]
          Length = 463

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 157/401 (39%), Gaps = 36/401 (8%)

Query: 12  TGQGSNSLGVYVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           T     S+ +Y+  P+C       C +C F +   + K   + ++     E    ++   
Sbjct: 48  TDAQYKSINLYLGIPYCIPTDPPHCGFCLFPTQDYKGKREMDFYLDFLSREAHLYKEFYQ 107

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT---VSSNVEITIEANPSSVEVNNFQG 124
              + S++ GGGTP+L++P +   +   ++  +    +SS +E+T+E  P     +  + 
Sbjct: 108 GAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTLEGIPQLFNEDKIRA 167

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            + AG NR+S+GVQ + ++ +   GR     +   AI L        + DLIY  P QT+
Sbjct: 168 IKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLSCNVDLIYDWPNQTV 227

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +L+  +   + H++ Y+L I   + F    K      PS    +++YN+ +    
Sbjct: 228 EAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQ---NTPSIEKKIEMYNIAKQFLI 284

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYI----------------GIGPGAHSRVKV 288
           + G     + +        L +  Y  Y D +                G+G  A +    
Sbjct: 285 SKGYKQKTVYDWEKEDNNQLISEKY-LYEDNLRDCLDANGQSKMTTMSGLGYAAVNMRLQ 343

Query: 289 GSHRVAIS----IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +     S      ++   +   +  N   V       +E     ++   L+  + I+ K
Sbjct: 344 PNSSSIKSVSAMNHRNLTEYYNAISLNKLPVERMFVHDTEDVKLIWIFQALQEMK-INTK 402

Query: 345 DWEMLAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRG 382
            +E +   ++ ++ +     L  +G++E      ++    G
Sbjct: 403 KYEKIFNSDIKLDYKPIWDALVEEGWVEHND-EYIKLINEG 442


>gi|204789668|gb|ACI02044.1| hypothetical protein [uncultured bacterium]
          Length = 334

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 2/185 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           G     +Y+  PFC   C YC F S+ + +++   + +I     E+ ++ +    + I +
Sbjct: 150 GDRGYSIYIGIPFCPTTCLYCSFTSNAIAKWRDRVDEYINCLKKEIDYVSEQFADKVIDT 209

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR 132
           ++ GGGTP+ + P  I  ++  + +   +SS  EIT+EA  P S+  +      + GV R
Sbjct: 210 VYVGGGTPTTLLPYQIDELMSYVREKLDLSSCREITVEAGRPDSITEDKLASLLRNGVTR 269

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           IS+  Q++ +++L+ +GR H+  E   A  LAR  F  ++ DLI  LP +   + +    
Sbjct: 270 ISVNPQTMNDETLKLIGRAHSVDEFREAFFLARKYFDNINTDLILGLPGEDEAKVKYTFD 329

Query: 193 RALSY 197
                
Sbjct: 330 EIAKL 334


>gi|295106363|emb|CBL03906.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 430

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 146/390 (37%), Gaps = 32/390 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN      +     +  S   EM  +++L       S++ GGGT
Sbjct: 35  LYMHVPFCERLCPYCSFNRFPF-AEDRARPYFASMRKEMMMLKEL--GYDFESLYVGGGT 91

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    I  + D I       S  E++ E NP+ +         +  V R+S+GVQS 
Sbjct: 92  PTIM----IDELCDTIDLAKETFSIAEVSSETNPNHLIPAYLDKL-QGRVQRLSVGVQSF 146

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ + R     + +E +  I  A   F  ++ D+I+  P QT      +++R +  
Sbjct: 147 DDGLLKQMDRYDKYGSGAEILERIGEASPYFTSLNVDMIFNFPAQTEDILINDIERVVES 206

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNH 256
                + Y L                +           Y +   + +      +E  S  
Sbjct: 207 GTSQTTFYPLMASPS---VARQLARTVGRVDYTRERTYYEIISELLAGGPDPLFEHGSAW 263

Query: 257 SF-------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +F        G +++ +     Y +Y  IG G  + +         S+      +   + 
Sbjct: 264 TFNKRGTGAAGEDAMIDEYVVDYEEYPAIGSGGITYLGDNLFVNTFSVN----DYNAAIA 319

Query: 310 KNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQ 365
               +++ K   S   +    F+M    LR  +  + +E   G  ++         ++  
Sbjct: 320 AGRMSLMGKTTFSLRDRMRYRFMMQLFGLR--LDKRQFERDFGCTVEAGLPVEMAFMKAS 377

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G  +R     L  T +G  ++  ++    +
Sbjct: 378 GAFDRDTRDELTLTPKGRYLMVVMMRQFFI 407


>gi|303229369|ref|ZP_07316159.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515905|gb|EFL57857.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 459

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 144/339 (42%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +  + + +    + +Y   PFC  +C YC F   + +    Q  FI + L ++  
Sbjct: 123 QYQRPFLESHSNKD---ISLYCGIPFCETRCVYCSFPYGLYQEYHRQSEFIAALLEDIDD 179

Query: 62  MRQLTGPRSIS--SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           +RQ+    ++   +++ GGGTP+++  ++   +L G++         E T+EA  P S+ 
Sbjct: 180 VRQICESYNLHTNTLYMGGGTPTILNNEDFHRVLTGLSTLIP--KGHEFTVEAGRPDSIT 237

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               Q  +   VNRIS+  Q++++  LR +GR H+A +        +      ++ D I 
Sbjct: 238 TEKIQSMQACHVNRISINPQTMDDTILRRIGRGHSAQDIDDMYQYVKKHTNFAVNMDFIA 297

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q +      +        ++++++ L I++G+  Y ++   D+  P E++   +  
Sbjct: 298 GLPGQNIKHMIHNMDYICHNLPENVTIHTLAIKRGSPLYDLNMQHDV--PDESIVKHMVQ 355

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDYIG-IGPGAHS 284
             Q      G   Y            E   ++  G    +N+        I  +GPG  S
Sbjct: 356 YAQERLEQAGYVPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQTIMSMGPGGSS 415

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + +K  + R     + K  + +   LK +    HA+ + 
Sbjct: 416 KWIKAPAFRQKKQHMPKDVDVYTDTLKALLAKRHALCKS 454


>gi|218677391|ref|ZP_03525288.1| coproporphyrinogen III oxidase [Rhizobium etli CIAT 894]
          Length = 235

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 2/199 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISS 73
            +  + VY+H PFC   C YC  ++ + R       ++     E++ +         + +
Sbjct: 36  KTGPVSVYLHVPFCRSMCWYCGCHTTITRQDAPVVEYLDVMSQEIELVSFAAGNDVPVKN 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + FGGGTP++++PQ    ++  +   +    +  + +E +P ++  +  +   + GV+R 
Sbjct: 96  VHFGGGTPTIMKPQEFTALMAKLRSAFAFEVDASVAVEIDPRTLAASMIEVLGENGVDRA 155

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SLGVQS +      + R  +  +  AA+  L       ++FDLIY LPKQT+      ++
Sbjct: 156 SLGVQSFDPIVQAAINRMQSFEQTEAAVAGLRSAGVTSINFDLIYGLPKQTVQSCVETVR 215

Query: 193 RALSYAVDHLSLYQLTIEK 211
            A     +  +++      
Sbjct: 216 LAAQLRPERFAVFGYAHIP 234


>gi|269119215|ref|YP_003307392.1| coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
 gi|268613093|gb|ACZ07461.1| Coproporphyrinogen dehydrogenase [Sebaldella termitidis ATCC 33386]
          Length = 415

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 14/277 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           +Y+H PFC K C +C+ N   ++     E +    ++E +          + +  ++FGG
Sbjct: 47  LYIHTPFCDKICSFCNLNR--KQLDNDLEEYTDFLISEFEKYGATNYMRHKRLEVVYFGG 104

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++ +   +  IL+ I KN+ +  N E T E    ++     +   + GVNR+S+G+Q
Sbjct: 105 GTPTIFKAGQLERILESINKNFILKDNCEFTFETTLHNLTDEKLEVMERLGVNRLSIGIQ 164

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++  + L R ++   A+  +   +  F   +  D+IY  P QT  + + + +   S 
Sbjct: 165 TFSDRGRKILNRTYDKETAVKRLGEIKAKFKGLVCVDIIYNYPDQTPEEVKEDAEIVHSL 224

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS--ENVAVDLYNLTQSITSAHGLHAYEISN 255
            +D  S Y L I +G+   K  KD    L    E           ++         EI+ 
Sbjct: 225 NIDSSSFYSLMIHEGSKMSKDIKDDVFHLDYKLETDKELHNTFMNTLLDTGEYEILEITK 284

Query: 256 HSFLGAESLHNLNYW----RYGDYIGIGPGAHSRVKV 288
            +  G +      Y     +  D + +G GA  ++  
Sbjct: 285 INKKGRDK---YKYITLSNKGTDILPVGLGAGGKLGN 318


>gi|238018957|ref|ZP_04599383.1| hypothetical protein VEIDISOL_00817 [Veillonella dispar ATCC 17748]
 gi|237864441|gb|EEP65731.1| hypothetical protein VEIDISOL_00817 [Veillonella dispar ATCC 17748]
          Length = 475

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 146/339 (43%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +   +       + +Y   PFC  +C YC F   + +    +  F+ +   +++ 
Sbjct: 139 EYQRPF---LADTDHKKVSLYCGIPFCDTRCVYCSFPYGLYQDYTDKSQFLVALGRDIED 195

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           M+ +      S+ +++ GGGTP+++  ++   IL  ++         E T+EA  P SV 
Sbjct: 196 MKTIAQSYGLSVDTLYMGGGTPTVLGDEDFHQILKQLSILVP--EGHEFTVEAGRPDSVN 253

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
               +     GVNRIS+  Q++++  LR +GR H+A +    +   + N    ++ D I 
Sbjct: 254 PRKIRSMLDFGVNRISINPQTMQDDILRRIGRGHSAQDIDELLQYVKVNTPFAVNMDFIA 313

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QTM      +        ++++++ L +++G+  Y ++   D+  P E++  ++  
Sbjct: 314 GLPHQTMQNMVENMDYVCQNLPENVTIHTLALKRGSPLYDLNMQDDI--PEEHLVAEMVQ 371

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHS 284
             +    A G   Y            E   ++  G    +N+         + +GPG+ S
Sbjct: 372 YGKERLEAAGYVPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQSILSMGPGSSS 431

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + ++   +R     + K  + +   +  + +  H + EK
Sbjct: 432 KWMRAPEYRQLKQHMPKDVDVYHATIDALLEKRHRICEK 470


>gi|260494066|ref|ZP_05814197.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260198212|gb|EEW95728.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 411

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 156/391 (39%), Gaps = 30/391 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++           
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYGAYKFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++     +   + G
Sbjct: 94  EIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    +  +   +  F   +  D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYANQTNEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHG 247
            +         D  S Y L I  G+   K  +    + +       +L+NL  S     G
Sbjct: 214 QDANLLAEVGADSASFYSLMIHDGSDISKEREKDKSVYIYDLERDEELHNLFYSRCIEKG 273

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
               E++  +       +  N     + + IG GA   ++      A ++ +    + K 
Sbjct: 274 YKLLELTKITNGRDSYKYIRNNNGLKNLLPIGVGAGGHIQAIG---AYNMNQQMSFYSKT 330

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQR 364
              N +       LS        ++ GL   +   + + +         +     +  ++
Sbjct: 331 TETNYN-------LS--------MISGLMQFDKFDLDEIKKYCNEESYKIVYRKLKEFEK 375

Query: 365 QGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
           +G+I+    F+  +   +G+   +S++A++ 
Sbjct: 376 EGYIKIENNFAIYQL--KGIFWGNSLVADII 404


>gi|291460953|ref|ZP_06026068.2| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379883|gb|EFE87401.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           periodonticum ATCC 33693]
          Length = 472

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 147/336 (43%), Gaps = 28/336 (8%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +YV  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 135 TVVKKELELLDKEHINLYVGIPFCPTKCKYCSFASYEISGGVGRFYNDFVEALLKEIQII 194

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +
Sbjct: 195 GDFLKTYNKKVSSIYFGGGTPSTLTETDLERVLKKLLENIDMSDVKEFTFEAGREDSLNI 254

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  +          A+N+   ++ DLI  L
Sbjct: 255 EKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFDRENFDLIFKEAKNLGFIINMDLIIGL 314

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +  +Y +D+L+++ L  ++ +  +K     +    +      +    
Sbjct: 315 PEETTEEILDTLAQLNAYDIDNLTIHCLAFKRASKLFK-----ESQERNSIDRALIEEHI 369

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV 286
           Q I     +  Y            E   +S  G ES+ N+       + + +G G  S++
Sbjct: 370 QEIVKEKEMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKI 429

Query: 287 KVGSHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
            +        IE++     P  +++ + K     +E
Sbjct: 430 VIEERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 465


>gi|254303386|ref|ZP_04970744.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323578|gb|EDK88828.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 469

 Score =  179 bits (454), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 146/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLEKVLKKLLENIDMTDVKEFTFEAGREDSLNI 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+ +   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PK+T  +    L +   Y +D+L+++ L  ++ +  +K  +  +  +    +        
Sbjct: 312 PKETTEEILETLSQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNVIDRALIEKHIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               S    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKSMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|227873342|ref|ZP_03991603.1| possible coproporphyrinogen oxidase [Oribacterium sinus F0268]
 gi|227840820|gb|EEJ51189.1| possible coproporphyrinogen oxidase [Oribacterium sinus F0268]
          Length = 557

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 132/352 (37%), Gaps = 48/352 (13%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWM 62
           L   E       S    +Y++ PFC  +C YC F S     +      ++     EM ++
Sbjct: 188 LQRAEKAYGKNISEGYSLYINIPFCPTRCAYCSFLSMPMGSFSERMPKYLSLLEEEMLFV 247

Query: 63  RQLTG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKNW--TVSSNVEITIEA-NPSS 116
            +  G    + + SI+ GGGTP+ +  +++ ++L  + K+        +E T+EA  P S
Sbjct: 248 LREMGEKRGKQLQSIYIGGGTPTALGEKDLEILLSLVDKHCFSKGKGAIEYTVEAGRPDS 307

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDL 175
           +     +  +   V+RIS+  QS  ++SL  +GR H+  E      LAR   F  ++ DL
Sbjct: 308 INREKLKLLQDFSVDRISINPQSFHQKSLDIIGRKHSVEEVKEKYSLARELGFDNINMDL 367

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD------------ 223
           I  LP + + Q E  L   L  A D L+++ L +++                        
Sbjct: 368 ILGLPGEHLQQVEESLSEILRLAPDSLTVHSLAVKRAARLKAEENHFREIYQAGGEAESF 427

Query: 224 --------LVLP---------SENVAVDLYNLTQSITSAHGLHAY---------EISNHS 257
                     LP              +     T         + Y         E    +
Sbjct: 428 SLDREFSIPYLPSLKKRQERREIEWMMLCSMDTAEKLDLQPYYLYRQKNMAGNLENIGFA 487

Query: 258 FLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHRV-AISIEKHPESWLKM 307
             G E L+N+         +GIG GA S++     R+      K   S+L+ 
Sbjct: 488 KEGKECLYNIFMMEEKHSVLGIGAGASSKILFPKGRIERTDNGKDMHSYLER 539


>gi|253581885|ref|ZP_04859109.1| iron-sulfur dehydrogenase [Fusobacterium varium ATCC 27725]
 gi|251836234|gb|EES64771.1| iron-sulfur dehydrogenase [Fusobacterium varium ATCC 27725]
          Length = 472

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 18/325 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQW 61
           ++     M       + +Y+  PFC  KC YC F S+     VG+  + F+++ L E++ 
Sbjct: 129 INTVRKEMEFLNREYINLYIGIPFCPTKCKYCSFASYEISGGVGRYYKGFVETLLKEIEM 188

Query: 62  MRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
             +        I SI+ GGGTPS +   ++  +L  I +N  +S   E T EA    S+ 
Sbjct: 189 AGKFLKDEGYKIESIYIGGGTPSTLTEDDLEKVLKKINENIDMSYLKEFTFEAGREDSLT 248

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
               +  +K G +RISL  Q+  E +L+ + RN N         +A+ +   ++ DLI  
Sbjct: 249 EKKLELVKKYGADRISLNPQTFNENTLKKVNRNFNRENFDRYFRIAKEMNFIINMDLIIG 308

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP +        L     Y +++L+++ L  ++ +  +K  K+   +            +
Sbjct: 309 LPDENTEDVLYTLNELEKYDIENLTIHSLAFKRASKLFKEDKNRKELDREIIEKRIKELI 368

Query: 239 TQSITSAHGLH-------AYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV---- 286
            +     + ++         E   ++  G ES+ N+         +G+G GA +++    
Sbjct: 369 EKKQMKPYYMYRQKNIMEWGENVGYAKEGKESVFNIEMIEENQSTMGLGGGAITKIVVKE 428

Query: 287 -KVGSHRVAISIEKHPESWLKMVRK 310
            +   +   I   K P  ++K +++
Sbjct: 429 TEFRDYIERIINPKDPALYIKEMKE 453


>gi|257468907|ref|ZP_05633001.1| coproporphyrinogen III oxidase [Fusobacterium ulcerans ATCC 49185]
 gi|317063155|ref|ZP_07927640.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688831|gb|EFS25666.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 467

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 24/313 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTG--PRSISSI 74
           + +Y+  PFC  KC YC F S+     VG+  + F+++ L E++   +        I SI
Sbjct: 144 INLYIGVPFCPTKCKYCSFASYEINGGVGRYYKGFVETLLEEIEMAGKFLKDEGYKIESI 203

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS +  +++  +L  + +N  ++   E T EA    S+     +  ++ G +RI
Sbjct: 204 YIGGGTPSTLTEEDLEKVLRKVNENIDMTYLKEFTFEAGREDSLTEKKLELVKQYGADRI 263

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  E++LR + RN N         +A+ +   ++ DLI  LP +T       L  
Sbjct: 264 SLNPQTFNEETLRKVNRNFNRENFDKYFKIAKEMGFIINMDLIIGLPDETTEDVLHTLNE 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFY----------KMHKDGDLVLPSENVAVDLYNLTQSIT 243
              Y +++L+++ L  ++ +  +          +   +  +   +E   +  Y + +   
Sbjct: 324 VEKYDIENLTVHSLAFKRASKLFKEDKSRKELDREIIEKRIRELTEKKQMKPYYMYRQ-- 381

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV-----KVGSHRVAISI 297
             + +   E   ++  G ES+ N+         +G+G GA +++     +   +   I  
Sbjct: 382 -KNIMEWGENVGYAKEGKESVFNIEMIEENQSTMGLGGGAITKIVIEETEFRDYIERIIN 440

Query: 298 EKHPESWLKMVRK 310
            K P  ++K +++
Sbjct: 441 PKDPALYIKEMKE 453


>gi|86747291|ref|YP_483787.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris HaA2]
 gi|86570319|gb|ABD04876.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris HaA2]
          Length = 474

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 139/373 (37%), Gaps = 13/373 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGG 79
           YVH PFC   C +C F  +V R + G   ++   L E+       L     I +++ GGG
Sbjct: 84  YVHVPFCQTHCLFCGFFQNVWRAEAG-PAYVDDVLAELAARSSTPLIASAPIDAVYLGGG 142

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   ++A +++G+ +   ++S+ EIT+E      ++   +    AGV R+S+GVQ+
Sbjct: 143 TPSALAADDLARLVEGLRRYLPLTSDCEITLEGRGFGFDLAKAEKVADAGVTRLSIGVQT 202

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              Q  R LGR     E  + +  L       +  DLIY LP QT   W  +++      
Sbjct: 203 FSTQVRRRLGRKLAGPEVQSFLADLVALGRTAVVCDLIYGLPGQTDDIWANDIEIVDRLG 262

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHGLHAYEISNHS 257
           +D ++LY L +  G    +  ++G L  P+   V   +Y       +  G      S+  
Sbjct: 263 LDGVTLYALNMFPGGPMARAIENGKLAPPAAPGVQARVYAEAVERLAGRGWLQVSQSHLV 322

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E + +N    R    +       +     +H               M+ +    V 
Sbjct: 323 RSAREFNRYNAAIKRGVACLPF----GAGAGGQAHGYRWRNVIDIAQRRDMIAQQRAPVE 378

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEM-LAGRNLDIECERNLQRQGFIERVQFSR 375
               +     A   ++        + +   E    G    +         G +  +    
Sbjct: 379 GLAQV-PADHAAHAMIAAGLEAGRLDLAAIEALRPGFRAAVAPLLANWAAGGLGELSHDG 437

Query: 376 LRCTQRG-MTMLD 387
            R  + G   + +
Sbjct: 438 FRPNRAGSFWISN 450


>gi|34762537|ref|ZP_00143534.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887815|gb|EAA24886.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 471

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 147/333 (44%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F++  L E+Q +
Sbjct: 134 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEVLLKEIQIV 193

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  ++   E T EA    S+ +
Sbjct: 194 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMADVKEFTFEAGREDSLNI 253

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++LR + R  N          A+ +   ++ DLI  L
Sbjct: 254 KKLEIMKKYSVDRISLNPQSFNLETLRRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGL 313

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y +D+L+++ L  ++ +  +K  ++ +  +    +        
Sbjct: 314 PEETTEEILNTLSQLKDYDIDNLTIHCLAFKRASKLFK--ENQERNIIDRVLIEKYIQKI 371

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E + +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 372 VEEKTMKPYYMYRQKNIIEWGENTGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIE 431

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 432 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 464


>gi|256028481|ref|ZP_05442315.1| coproporphyrinogen III oxidase [Fusobacterium sp. D11]
 gi|289766402|ref|ZP_06525780.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289717957|gb|EFD81969.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 469

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEALLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  +S   E T EA    S+  
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNA 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                 +K  V+RISL  QS   ++L+ + R  N          A+ +   ++ DLI  L
Sbjct: 252 QKLGIMKKYSVDRISLNPQSFNLKTLKRVNRRFNRENFDLIFKEAKKLEFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y +D+L+++ L  ++ +  +K  +  +  +    +        
Sbjct: 312 PEETTKEILDTLSQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNIIDRALIEKHIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKTMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|254303795|ref|ZP_04971153.1| coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323987|gb|EDK89237.1| coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 411

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/390 (19%), Positives = 159/390 (40%), Gaps = 28/390 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPR 69
           T   +  LG+Y H P+C K C +C+ N   ++     E + +    E++     +     
Sbjct: 36  TENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTEYLCEEIKKYGAYEFCKTS 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I  +FFGGGTP++ + + +  IL  + +N+  S + E+T E    ++     +   + G
Sbjct: 94  EIDVVFFGGGTPTIFKKEQLERILKTLNENFKFSKDYEMTFETTLHNLSFEKLKVMEENG 153

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWE 188
           VNRIS+G+Q+   +  + L R ++    + ++   +  F   +  D+IY    QT  +  
Sbjct: 154 VNRISVGIQTFSNRGRKLLNRTYDKDYVVESLKEIKKRFSGLVCIDIIYNYANQTDEEVL 213

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHG 247
            +         D +S Y L I  G+   K  +    + + S     +L+NL  +     G
Sbjct: 214 QDADLLAEVEADSVSFYSLMIHDGSDISKEREKDKSVYIYSLERDEELHNLFYNRCIEKG 273

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
               E++  +    +  +  N     + + IG GA   ++      A ++ +    + K 
Sbjct: 274 YKLLELTKLTNGKDKYKYIRNNNTLKNLLPIGVGAGGHIQDIG---AYNMNQQMSFYSKT 330

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LDIECERNLQR 364
              N +       LS        ++ GL   +   + + +         +  E  +  ++
Sbjct: 331 SEINYN-------LS--------MISGLMQFDKFDLNEIKKYCSEESYKIFYEKLKEFEK 375

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +G+I+           +G+   +S++AN+ 
Sbjct: 376 EGYIKIEDNFAFY-ELKGIFWGNSLVANII 404


>gi|325143012|gb|EGC65367.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           meningitidis 961-5945]
          Length = 323

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 110/307 (35%), Gaps = 23/307 (7%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
            +    E +IE +P  V  +      + G NR+S+G+Q  + +    + R  +  E    
Sbjct: 1   ELIPTGEYSIEIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEV 60

Query: 161 IHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           I  AR   F  +S DLIY LP QT    +  +   LS   D L+LY        +F    
Sbjct: 61  IDAAREAGFKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPH-VFKPQR 119

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNY 269
           +     +P     +D+        +  G     + + +    E            +   Y
Sbjct: 120 RIDTASVPDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGY 179

Query: 270 WRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
             Y D   + IG  +  ++     +     E+  +++   + +    ++    L+ +   
Sbjct: 180 STYADCDLVAIGVSSIGKIGSTYSQN----ERDIDAYYAAIDEGRLPIMRGYQLNQDDIL 235

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ----GF-IERVQFSRLRCTQRG 382
              ++  L  R  +  + +E + G   D   +  L       G  + R+    L  T +G
Sbjct: 236 RRNIIQDLMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKG 295

Query: 383 MTMLDSV 389
             ++ ++
Sbjct: 296 RFLIRNI 302


>gi|237741740|ref|ZP_04572221.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256845068|ref|ZP_05550526.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|294785646|ref|ZP_06750934.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|229429388|gb|EEO39600.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256718627|gb|EEU32182.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|294487360|gb|EFG34722.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 411

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 163/400 (40%), Gaps = 33/400 (8%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + + + +  +  N  LG+Y H P+C K C +C+ N   ++     E + +    E++   
Sbjct: 28  NDFLDLLNRENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYG 85

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +      I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++    
Sbjct: 86  AYEFCKTSEIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEK 145

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            +   + GVNRIS+G+Q+   +  + L R ++    +  +   +  F   +  D+IY   
Sbjct: 146 LKVMEENGVNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYA 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT  +   +         D  S Y L I  G+   K  +    + + +      L+NL 
Sbjct: 206 NQTDEEVLQDADLLAEVGADSASFYSLMIHDGSNISKEREKDKSVYIYNLARDEKLHNLF 265

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE 298
            +    +G    E++  +       +  N     + + IG GA   +  +G++ +   + 
Sbjct: 266 YNRCIENGYKLLELTKITNGRDAYKYIRNNNGLRNLLPIGAGAGGHIQDIGAYNMNQQMS 325

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LD 355
            + ++                 LS        ++ GL   +   ++  +         + 
Sbjct: 326 FYSKT-----------TEIGHNLS--------MISGLMQFDKFDLEMIKKYCNEESYKII 366

Query: 356 IECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
            +  +  +++G+I+    F+  +   +G+   +S++A++ 
Sbjct: 367 YKKLKEFEKEGYIKIENNFAIYQL--KGIFWGNSLVADII 404


>gi|313679186|ref|YP_004056925.1| coproporphyrinogen dehydrogenase [Oceanithermus profundus DSM
           14977]
 gi|313151901|gb|ADR35752.1| Coproporphyrinogen dehydrogenase [Oceanithermus profundus DSM
           14977]
          Length = 437

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 85/386 (22%), Positives = 159/386 (41%), Gaps = 31/386 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +Y+H PFC   CP+C FN+H + R     +++ ++   E+             + + GGG
Sbjct: 38  LYIHVPFCESICPFCMFNAHKLDRRSSQVQDYFEALKRELLMYEA--AGFDFGAAYVGGG 95

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP  +  + +A  L+ +   + ++   E+++EANP  +     Q    AGV+R+S+GVQS
Sbjct: 96  TP-ALVHEELARFLEFVRGRFDLT---EVSVEANPR-IPDAAVQSLAAAGVDRLSVGVQS 150

Query: 140 LEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            ++  L  LGR     + +E    ++     F  ++ D I+ LP         +LQ A+ 
Sbjct: 151 FDDGMLERLGRLEAYGSGAEIRERVNRLLGRFRIVNVDFIFNLPNHDPEVLARDLQIAVD 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +D L+ Y L      +  + ++         +  ++ Y   + I      H   +S+ 
Sbjct: 211 DGIDQLTTYPL------MEAQQNRGYVDRQGRISYDLEAYLYKRVILPTLREHYTPVSSW 264

Query: 257 SFLGAESLH----NLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            F   +       +     Y DY+GIG G+ S         A ++      + ++V +  
Sbjct: 265 CFSRKDKPEVDMLDEYVVDYFDYVGIGTGSMSLHDGRVSVNAYTLP----LYQRLVAQGR 320

Query: 313 HAVV-EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFI 368
             VV E   L+       +LMM L  R  +  K +E + G  L          L+  G +
Sbjct: 321 LPVVLESAPLARRDYMLYYLMMALFGRR-VDCKKFEAIFGVPLRRALWPECTALRAMGLV 379

Query: 369 ERVQFSRLRCTQRGMTMLDSVIANLA 394
              +   +   +RGM +   ++    
Sbjct: 380 -YARGDHIYTNERGMYVFLMILREFF 404


>gi|291165705|gb|EFE27753.1| oxygen-independent coproporphyrinogen III oxidase [Filifactor
           alocis ATCC 35896]
          Length = 417

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 154/386 (39%), Gaps = 26/386 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            ++ + Y N +  Q +  LG+YVH PFC   C +C +   V   +     ++   L E+ 
Sbjct: 19  FEFKNEYSNTLEYQDTKQLGLYVHIPFCKSICKFCPYCKEVYHTE-KMNRYMDYLLKEIA 77

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + Q    + +SS++FGGGTP  +    +  ++D +  ++ ++    I IE +PS+V   
Sbjct: 78  LVTQGQVKKEVSSLYFGGGTP-ALAIDRLGEVIDSLTSHFEITQG--IGIELHPSNVTEK 134

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYAL 179
             Q     GV +IS+G+QS +++ L  LGR  N  E    A+   +  F  ++ D I+AL
Sbjct: 135 LLQKLSDIGVTKISIGIQSFQDKFLGILGRKENRFETMFDALQ--KVSFETVAMDFIFAL 192

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT    + +++ A S   +H+++Y         F  +          +     L    
Sbjct: 193 PNQTFQDLQKDIEVAFSNGANHIAIYPFI-----DFGFLESGIQEF--QKKEKRALLKQI 245

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  G     I   S  G  S    +     +++G G  A + +         S+  
Sbjct: 246 TDYCEERGYTRDSIWTFSKDGRAS---YSSMTRDNFLGFGASATTCLDEIFKINTFSV-- 300

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
             E ++  ++            +  Q+   +L         +  K+++    ++L     
Sbjct: 301 --EEYINRLQSEQLPTSLTLDFTVRQRMIYYLFWKF-YSMKVDCKEFQDFFNQDLKKIYG 357

Query: 360 RNL---QRQGFIERVQFSRLRCTQRG 382
             L   +R GF+          T++G
Sbjct: 358 LELFFAKRIGFLTERD-GVYELTEKG 382


>gi|237743363|ref|ZP_04573844.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229433142|gb|EEO43354.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 469

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 146/333 (43%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E++ +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVETLLREIKII 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +
Sbjct: 192 GDFLKTYNKKVSSIYFGGGTPSTLTEDDLERVLRKLLENIDMSDVKEFTFEAGREDSLNI 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+R+SL  QS   ++L+ + R  N          A+ +   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRMSLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLGFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L++   Y +D+L+++ L  ++ +  +K  +  +       +  +     
Sbjct: 312 PEETTEEILNTLRQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNAIDRALIEEHIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               S    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKSMKPYYMYRQKNIIEWGENIGYSREGKESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|328887085|emb|CCA60324.1| Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III
           oxidase, oxygen-independent [Streptomyces venezuelae
           ATCC 10712]
          Length = 515

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 85/400 (21%), Positives = 160/400 (40%), Gaps = 30/400 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFN--SHVRRYKVGQENFIQSFLTEM 59
           +Y S  +     + ++ L +Y H PFC   C +C     S  +     Q+ F+Q+ + E+
Sbjct: 54  EYFSFLDRQSHPEQTDIL-LYFHIPFCEAFCNFCACFKESAAKYQGERQKRFVQAMVKEI 112

Query: 60  Q--WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +     +      I  + FGGGTPS +E  ++A IL+ + + + +S    I++E +P  +
Sbjct: 113 ERNARSKYFQGTKIKYVQFGGGTPSALEQDSMAAILEAVHREFDLSEVDGISLEGSPLGL 172

Query: 118 EVN-NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDL 175
             +   +  +  G+ RIS GVQ+L+ +  + L       +        R    R  + DL
Sbjct: 173 SKDGYIEMLKSLGITRISFGVQTLDPEIRKKLTIKATVDQVHQTAENIRKAGIRTFALDL 232

Query: 176 IYALPKQTMTQWEMELQRAL-SYAVDHLSLYQLTIEKGTLFYKMHKDGDL--VLPSENVA 232
           +Y LP Q       +LQ          +  Y+    +GT   +  + G +  V PS  + 
Sbjct: 233 MYNLPGQDDEVLAKDLQGICAELRPSFVQTYRFNQWEGTRLDQQIRAGKVADVKPSGAIE 292

Query: 233 VDLYNLTQSITSAHGL-HAYEISNHSFLGAESLHNLNYWRYGD------YIGIGPGAHSR 285
            + Y   +   +A+G      I+  + L       LN+   G+       +GIGP A + 
Sbjct: 293 REQYRQIKDGLAAYGYDKQLLINFFTRLDDPGEIGLNHACGGNGYRASYTLGIGPAAENY 352

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL--MMGLRLREGISV 343
           +   S+R    +E+    W++ V      + +    S ++  +  +         +   V
Sbjct: 353 MGERSYRNHTDVER----WMREVEAGIIPIEQGRICSEDEVENRVMVFFPVFGSVKKADV 408

Query: 344 KDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGM 383
            ++E    R +D      L   G+        L  T+ G 
Sbjct: 409 ANFE-KYRREVDW-----LVEGGYAVETDED-LTLTEVGR 441


>gi|260495017|ref|ZP_05815146.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260197460|gb|EEW94978.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 469

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/333 (21%), Positives = 143/333 (42%), Gaps = 22/333 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F++  L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYIGIPFCPTKCKYCSFASYEINGGVGRFYNDFVEVLLKEIQIV 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +  +++  +L  + +N  +S   E T EA    S+ +
Sbjct: 192 GDFLKTYSKKVSSIYFGGGTPSTLTEEDLERVLKKLLENIDMSDVKEFTFEAGREDSLNI 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS    +L+ + R  N          A+ +   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLDTLKRVNRRFNREHFDLIFKEAKKLEFIINMDLIIGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +   Y +D+L+++ L  ++ +  +K  +  +       +        
Sbjct: 312 PEETTEEILDTLSQLKDYDIDNLTIHCLAFKRASKLFK--ESQERNSIDRALIEKHIQKI 369

Query: 240 QSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVG 289
               +    + Y         E   +S  G ES+ N+       + + +G G  S++ + 
Sbjct: 370 VEEKTMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKIVIE 429

Query: 290 SHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
                  IE++     P  +++ + K     +E
Sbjct: 430 ERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|268678916|ref|YP_003303347.1| coproporphyrinogen dehydrogenase [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616947|gb|ACZ11312.1| Coproporphyrinogen dehydrogenase [Sulfurospirillum deleyianum DSM
           6946]
          Length = 421

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 74/376 (19%), Positives = 157/376 (41%), Gaps = 29/376 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   CPYC FN      K    ++ +    E+  ++ L      + +  GGGT
Sbjct: 45  LYIHVPFCTMFCPYCSFNKF-NYTKEAATHYFKHLREEILHVKAL--GYRFNYLVIGGGT 101

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P LI+ + +   ++ + K + +     ++ E++P+ ++           V+R+S+GVQ+ 
Sbjct: 102 P-LIDEEELIQTIELVKKLFDIKH---VSCESDPNHIQPKTVLRL-DGLVDRLSVGVQTF 156

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ LGR     +  E    I     I P  S DLI+  P Q+      +++     
Sbjct: 157 DDTLLKKLGRYEKFGSGEEVYRKIASMLGILPITSVDLIFNFPNQSKENLLYDIETLTKL 216

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +  S Y L     +   K      L   S     + +N+ +          +     S
Sbjct: 217 SPEQSSFYPLMT---SSMVKSSVTKTLGKFSLTNEYEFFNIIKESLKKSYPSRH---GWS 270

Query: 258 FLG-AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F    E++ +       +Y+G+G G+ S +    +    +++K    + + + +   AVV
Sbjct: 271 FSKEKEAIFDEYVIDNEEYVGVGSGSFSFINNTLYHNEFALDK----YAECIAQRKSAVV 326

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR- 375
           ++    +  +    LM+ L     +S K +E++ G  ++   ++ L    F + ++ ++ 
Sbjct: 327 KERTFEANSRMYYRLMVDL-FNGKLSKKKFEIMFGIKIEDALKKELMALKFAKAIKENKE 385

Query: 376 -LRCTQRGMTMLDSVI 390
            +  T+      D + 
Sbjct: 386 SIVTTE----FGDYLF 397


>gi|262067052|ref|ZP_06026664.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379261|gb|EFE86779.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 411

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 79/401 (19%), Positives = 167/401 (41%), Gaps = 35/401 (8%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           S + + +  +  N  LG+Y H P+C K C +C+ N   ++     E + +    E++   
Sbjct: 28  SDFLDLLNTENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTEYLCEEIKKYG 85

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +      +  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++    
Sbjct: 86  AYEFCKTSEVDVVFFGGGTPTIFKKEQLEKILKTLNENFKFAKDYEMTFETTLHNLSFEK 145

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            +   + GVNRIS+G+Q+   +  + L R ++    +  +   +  F   +  D+IY   
Sbjct: 146 LKVMEENGVNRISVGIQTFSNRGRKILNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYA 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT  +   +         D +S Y L I  G+   K  +    + + S     +L+NL 
Sbjct: 206 NQTDEEVLQDADLLAEVEADSVSFYSLMIHDGSDISKEREKDKSVYIYSLERDEELHNLF 265

Query: 240 QSITSAHGLHAYEISN--HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
            S     G    E++   +     + + N N     + + IG GA  R++      A ++
Sbjct: 266 YSRCIEKGYKLLELTKLTNGKDKYQYIRNNN--ALKNLLPIGVGAGGRIQNIG---AYNM 320

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---L 354
            +    + K    N +       LS        ++ GL   +   + + +         +
Sbjct: 321 NQQMSFYSKTSEINYN-------LS--------MISGLMQFDKFDLNEIKKYCSEESYKI 365

Query: 355 DIECERNLQRQGFIERVQF-SRLRCTQRGMTMLDSVIANLA 394
             E  +  +++G+I+ V   +  +   +G+   +S++AN+ 
Sbjct: 366 IYERLKEFEKKGYIKIVNNFAVYQL--KGIFWGNSLVANII 404


>gi|157962215|ref|YP_001502249.1| coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
 gi|157847215|gb|ABV87714.1| Coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
          Length = 428

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/374 (18%), Positives = 152/374 (40%), Gaps = 29/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   C +C F+      +   E + Q+   E++ +  +      + ++ GGGT
Sbjct: 53  LYIHIPFCHTLCRFCSFHKIKYNQQKALE-YFQALRKEIRHV--IESGLRFNRVYIGGGT 109

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++E +    ++  I    ++++  EI+ E +PS     + +      V+R+S+G+QS 
Sbjct: 110 TTILEDE----LVKTIELIKSLTTVREISCETDPSYFRTGHPEVLNGL-VDRMSIGLQSF 164

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L+   R     +  E    I     +FP ++ DL+Y    QT      +++R +  
Sbjct: 165 DDRILKASSRFEKFGSGDEQEIDIRRGIELFPTVNVDLMYGFKGQTPDSVVTDIKRLIQL 224

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS-NH 256
             D ++ Y LT+       K  K    +          +   + + S   +   E    +
Sbjct: 225 EPDQITTYPLTL----GIGKSRKKSQCLAGEPKDLFPQFLAVKQVMSDRYMM--EFPWTY 278

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           S    +++ N       +  G+G GA  R        + SI+K    +++++ + G    
Sbjct: 279 SRNFGQAVENKYVLDGENCFGVGSGAFGRFGEQFQISSFSIDK----YIQLINQGGVGTS 334

Query: 317 EKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQ 372
             + LS +      LM  + + +G +    ++   G++L          L   G + + Q
Sbjct: 335 HHKLLSVKSINQHHLM--IMMGKGCLDNALFKAHTGKSLWQAFPVELTYLLASGALIK-Q 391

Query: 373 FSRLRCTQRGMTML 386
                 T+ G  + 
Sbjct: 392 GDSYFTTEAGQFIA 405


>gi|237739303|ref|ZP_04569784.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422911|gb|EEO37958.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 472

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 146/336 (43%), Gaps = 28/336 (8%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 135 TVVKKELEFLDKEHINLYLGIPFCPTKCKYCSFASYEIGGGVGRFYNDFVEALLKEIQII 194

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +
Sbjct: 195 GDFLKTYNKKVSSIYFGGGTPSTLTEIDLERVLKKLLENIDMSDVKEFTFEAGREDSLNI 254

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+ +   ++ DLI  L
Sbjct: 255 EKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKKLGFIINMDLIIGL 314

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +  +Y +D+L+++ L  ++ +  +K     +    +      +    
Sbjct: 315 PEETTEEILDTLAQLNAYDIDNLTIHCLAFKRASKLFK-----ESQERNSIDRALIEEHI 369

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV 286
           Q I     +  Y            E   +S  G ES+ N+       + + +G G  S++
Sbjct: 370 QEIVKEKEMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKI 429

Query: 287 KVGSHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
            +        IE++     P  +++ + K     +E
Sbjct: 430 VIEERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 465


>gi|115525156|ref|YP_782067.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisA53]
 gi|115519103|gb|ABJ07087.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisA53]
          Length = 470

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 76/319 (23%), Positives = 125/319 (39%), Gaps = 11/319 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +A E       +     Y+H P+C   C +C F  +V R +V    F+   + E++    
Sbjct: 68  AALERVFETPRAAPAVAYIHVPYCQNHCLFCGFFQNVWRPEVA-GPFVDDVIAEIESSAA 126

Query: 65  --LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L     I +++ GGGTPS +  +++A ++  + +   ++ + EIT+E       V   
Sbjct: 127 TALVASAPIEAVYIGGGTPSALPSEHLARLIAALRQLLPLTPDCEITLEGRSHGFGVAKA 186

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
                AG  RISLGVQS      R LGR  +  E    +     +    +  DLIY LP 
Sbjct: 187 AAALDAGATRISLGVQSFATDVRRRLGRKLSGPEVALFLEELVGLKRASIVCDLIYGLPG 246

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQ 240
           Q    W  +++ A    +D ++LY L +  G       + G L       A    Y    
Sbjct: 247 QDHDGWLRDIEIANQIGLDGVTLYALNLFPGGPLASAIERGKLPPAGSIAAQARDYAAGI 306

Query: 241 SITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                 G      S+      E + +N    R    +  GPGA  +      R  + +E+
Sbjct: 307 ERLQQRGWRQAYQSHLIRSPHEHNRYNAAIKRGVACLPFGPGAGGQAHGYRWRNVMDVEQ 366

Query: 300 HPESWLKMVRKNGHAVVEK 318
                 + ++  G A VE 
Sbjct: 367 R-----RAMQAEGRAPVEG 380


>gi|57168503|ref|ZP_00367636.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
 gi|305432919|ref|ZP_07402077.1| radical SAM domain protein [Campylobacter coli JV20]
 gi|57020008|gb|EAL56685.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter coli RM2228]
 gi|304444073|gb|EFM36728.1| radical SAM domain protein [Campylobacter coli JV20]
          Length = 436

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/354 (19%), Positives = 153/354 (43%), Gaps = 24/354 (6%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            +   +  +Y H PFC   CPYC F+ +    ++ +  + ++   E+  ++        S
Sbjct: 37  AKKDKTYMLYAHIPFCHTFCPYCSFHKYYYDEELAK-IYFENLRKELMLIKD--KGFDFS 93

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
           S++ GGG  +LI    +   L+   K + +    EI+ E++P+ +       ++   ++R
Sbjct: 94  SMYVGGG-TTLINENELLKTLELCKKLFNIK---EISCESDPNHIIPEKLSMFKGI-IDR 148

Query: 133 ISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +S G+QS +++ L+ + R +   ++ +    I  A  I P  S DLI+  P QT  Q   
Sbjct: 149 LSCGIQSFDDEILKKIARYNKFGSSKQLQEKISKALGILPIFSLDLIFNFPSQTEEQLLN 208

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +L+ A + A   ++ Y L     +   K +    L + +++     Y + ++    +   
Sbjct: 209 DLKIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVETKDNEFKYYQMIRNFFKDYQ-- 263

Query: 250 AYEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             + +  SF   ++  N  Y   + +Y+G+G GA S +       A         + KM+
Sbjct: 264 --QNNGWSFSLEKNQLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----DLNDYAKMI 317

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL 362
           ++  +A + K   + ++    ++ +       I +  +      +L+ E  + L
Sbjct: 318 QEKQNANIAKASFTRKEIIK-YIFLTEMFAGKIQIDKFNQTLNCDLEKELFKEL 370


>gi|325479804|gb|EGC82891.1| coproporphyrinogen dehydrogenase HemZ [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 431

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 129/309 (41%), Gaps = 31/309 (10%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                 +Y++ PFC  +C YC + + V   +  +  +I S + E++    ++ PR + +I
Sbjct: 121 DPRDFSLYINIPFCPSRCHYCSYPTIVGPRE-DRSKYIDSLIYEIE---NISLPRKLDAI 176

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS I+  ++  +L  I + +   S  E T EA    +++ +  +  R+ GV RI
Sbjct: 177 YIGGGTPSYIKTDDLRRLLLAINEKF---SYKEFTFEAGREDTLDFDKLKLLRENGVGRI 233

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  QS  E  ++  GR ++    +    +AR++   ++ D I  L  +    ++     
Sbjct: 234 SLNPQSFNEDIVKRAGRAYDFDHFLDIFKMARDLGFIINTDFIIGLMGEKADDFKKNFFI 293

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+++ + L I+  + +++ +        S    + +  +       +    Y +
Sbjct: 294 LEDLMPDNITFHTLAIKVSSKYFEKNAKA-----SRKDVILISEMIDDFVRRNSYKPYYL 348

Query: 254 SNHSFLGAESLHNLNYWRY--------------GDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  A +L N+ Y +                  IG+G  A+S++  G         +
Sbjct: 349 YRQ-KNIASNLENVGYQKNNTSQRYNIIINEELESIIGLGMNANSKLLNGKK---FRNSR 404

Query: 300 HPESWLKMV 308
           +   + + V
Sbjct: 405 NLRDYYEKV 413


>gi|323484131|ref|ZP_08089501.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
 gi|323693224|ref|ZP_08107442.1| hypothetical protein HMPREF9475_02305 [Clostridium symbiosum
           WAL-14673]
 gi|323402573|gb|EGA94901.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           symbiosum WAL-14163]
 gi|323502707|gb|EGB18551.1| hypothetical protein HMPREF9475_02305 [Clostridium symbiosum
           WAL-14673]
          Length = 417

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 79/385 (20%), Positives = 158/385 (41%), Gaps = 27/385 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + + Y++ +       LG+YVH PFC + C +C +   +   +     +I + + E+   
Sbjct: 21  FKNEYDSRLNYVECTGLGLYVHLPFCSQLCSFCPYCKELYSAE-KCSLYIDALIKEIHLS 79

Query: 63  R-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +    + ++S++FGGGTP  +    +  I+D + +++ ++    I +E +P +V    
Sbjct: 80  AGRQKEKKPVTSLYFGGGTP-ALAAPRLKEIIDALQEHFIITEG--IGLELHPDNVTNET 136

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
            +  ++AG+ +IS+G+QS +++ L  LGR         A  L+   F  +S D I+ALP 
Sbjct: 137 LRLLKEAGITKISIGIQSFQDKYLNILGRR-AFDCKRMAEALSNFSFETVSMDFIFALPG 195

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQ 240
           QT    + +++ A +   +H+++Y L     T    K  K  +     + + +    +  
Sbjct: 196 QTSEDLKNDIETAFANGANHIAIYPLIDFTFTDSRIKPLKKKEKRKLLDEITLYCKEMGY 255

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
              S         SN    G  S          +++G G  A + +K        S+   
Sbjct: 256 RRDSIWTF-----SNSGTAGYSS------MTRDNFLGFGCSATTLLKDQFKINTFSV--- 301

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K + +           S  Q+   +L         ++ KD+E+     L      
Sbjct: 302 -AEYQKRIEEGKLPTSLTLRFSERQRMVYYLFWTA-YSTRVNSKDFEVFFNTPLKKAYGP 359

Query: 361 NL---QRQGFIERVQFSRLRCTQRG 382
            L   ++ GF    +    R T +G
Sbjct: 360 ELWLAKKLGFATE-ENGEYRMTLKG 383


>gi|325849468|ref|ZP_08170763.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480124|gb|EGC83198.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 212

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 115/203 (56%), Gaps = 4/203 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             +G Y+H PFC KKC YCDF +++   +   + +I++ + E++  ++      I +I  
Sbjct: 2   EKVGCYIHIPFCQKKCYYCDFCAYM-NVENRVKPYIKNLIKEIKLYQERLNI-EIDTIHI 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS ++ + I  I++ I K          TIE NP+ +       Y+  G+NRISLG
Sbjct: 60  GGGTPSYVDAKYIEEIVNEIKKFKIEKIKE-FTIECNPNFISKEKLAIYKDIGINRISLG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQS +++ L+ +GRNH A  A+  I + R+  F  +SFDL+  LP+QT    + EL    
Sbjct: 119 VQSFDDEVLKEIGRNHTADIALKDIDMIRDAGFDNLSFDLMLNLPRQTYKSVKNELAMVK 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
             + +H+S Y L +E+G+ FY +
Sbjct: 179 KISPEHISWYSLILEEGSRFYAL 201


>gi|26990486|ref|NP_745911.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Pseudomonas putida KT2440]
 gi|24985460|gb|AAN69375.1|AE016574_7 oxygen-independent Coproporphyrinogen III oxidase family protein
           [Pseudomonas putida KT2440]
          Length = 471

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 85/395 (21%), Positives = 161/395 (40%), Gaps = 25/395 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISS 73
           + +  +Y+  P+C++ C +CD   S   R +  +E +I+  L E+              S
Sbjct: 71  AKNTALYLGVPWCIQTCSFCDLAYSRSPRVEEKRE-YIEVILKELDIYNNAGLASVPAGS 129

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++FGGGTPS+++   +A  +DG  +   ++ N  IT+EA+P+++  +  +  R   VNRI
Sbjct: 130 LYFGGGTPSILDNDLLAAFVDGALQRSRLADNPVITLEASPATLTTSKLKLLRAR-VNRI 188

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS +    +  GR     + +  +      F  ++ D++Y +P Q++    + L+ 
Sbjct: 189 SLGVQSTDTALRQREGRILPREKLLERVATTLEHFDLVNTDVLYGMPGQSLESVFLTLKD 248

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  V  ++ Y+  +  GT  Y++ +       SE  A ++Y L ++   A G    E 
Sbjct: 249 LVNLDVPSITFYRNELFAGTKSYQLARQQPWATVSEYKAREMYFLGKTYLEACGYQ--ES 306

Query: 254 SNHSFLGAESLHNLNYWRYG--------DYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
               F+ A     +  W            Y G+G GA S     SH V     +    W+
Sbjct: 307 PLGWFVKARKTEAITSWETMIERWSTVVPYFGLGMGAFS--TAASHWV--QNHESLNGWM 362

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG--RNLDIECERNLQ 363
           + VR     +        +++     M  +R+   +        +G  R    +      
Sbjct: 363 ERVRSGRLPLASGSLFDDKERFMVKFMRYIRVFSRVKRAHLLAESGVTRPAVEQLLDTWV 422

Query: 364 RQGFIERVQFSRLRCTQRG----MTMLDSVIANLA 394
             G         L  T+ G      ++D +     
Sbjct: 423 AMGL-AIDDAEWLVFTEAGCSLIHWLIDDLARAFV 456


>gi|218516541|ref|ZP_03513381.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 162

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 85/147 (57%), Positives = 111/147 (75%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++
Sbjct: 16  LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLKETAAVRAMSGPKT 75

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           ++SIF GGGTPSL++P+ +A ILDGIA++W V   +EIT+EANPSSVE   F+GYR AGV
Sbjct: 76  VTSIFLGGGTPSLMKPETVAAILDGIARHWHVPDGIEITMEANPSSVEAERFRGYRAAGV 135

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEA 157
           NR+SLGVQ+L ++ L+FLGR H+ ++A
Sbjct: 136 NRVSLGVQALNDRDLKFLGRLHDVADA 162


>gi|19704106|ref|NP_603668.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714310|gb|AAL94967.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 411

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 161/400 (40%), Gaps = 33/400 (8%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + + + +  +  N  LG+Y H P+C K C +C+ N   ++     E + +    E++   
Sbjct: 28  NDFLDLLNRENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYG 85

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +      I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++    
Sbjct: 86  AYEFCKTSEIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEK 145

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            +   + GVNRIS+G+Q+   +  + L R ++    +  +   +  F   +  D+IY   
Sbjct: 146 LKVMEENGVNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYA 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT  +   +         D  S Y L I  G+   K  +    + + +      L+NL 
Sbjct: 206 NQTDEEVLQDADLLAEVGADSASFYSLMIHDGSNISKEREKDKSVYIYNLARDEKLHNLF 265

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE 298
            +     G    E++  +       +  N     + + IG GA   +  +G++ +   + 
Sbjct: 266 YNRCIEKGYKLLELTKITNGRDAYKYIRNNNGLRNLLPIGAGAGGHIQDIGAYNMNQQMS 325

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LD 355
            + ++                 LS        ++ GL   +   ++  +         + 
Sbjct: 326 FYSKT-----------TEISHNLS--------MISGLMQFDKFDLEVIKKYCNEESYKII 366

Query: 356 IECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
               +  +++G+I+    F+  +   +G+   +S++A++ 
Sbjct: 367 YRKLKEFEKEGYIKIENNFAIYQL--KGIFWGNSLVADII 404


>gi|315651352|ref|ZP_07904378.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
 gi|315486411|gb|EFU76767.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
          Length = 417

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 88/386 (22%), Positives = 164/386 (42%), Gaps = 29/386 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + + ++  +     +  G+YVH PFC   C +C +   +   +  +  +I + + E+  +
Sbjct: 21  FKNDFDKVLPYDKGSEFGLYVHIPFCKSICNFCPYCKIIYDEETAK-GYIDALIKEIHLV 79

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            RQ  G R  +S++FGGGTP+L+    I  I+  + +++ ++    I IE +P +V V+ 
Sbjct: 80  GRQWNGRRRATSLYFGGGTPALL-ADRITDIISALREHFIITDG--IGIELHPDNVNVSV 136

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALP 180
            +  + AGV++IS+G+QS +++  R L R   +  +   A++     F  +S D I+ALP
Sbjct: 137 LKTLKSAGVDKISIGIQSFQDKYRRVLRRRKFDIKDISKALNEVE--FETVSMDFIFALP 194

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT    + ++  A +   +H+++Y L     T                    +   L  
Sbjct: 195 TQTFGDLKNDIDMAFANGANHIAIYPLIDFTFTK----------NKVPAMPKKEKRKLLD 244

Query: 241 SITSAHGLHAY-EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
            IT+      Y   S  +F   ES  + +     ++ G G  A S  K        S+ +
Sbjct: 245 DITNYCISKGYVRKSIWTFASEESA-SYSSMTRDNFFGFGCSATSLFKDQFKINTFSVLE 303

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
               + K +  N             Q+   +L   L     + VK++E      L+    
Sbjct: 304 ----YCKRIDANTLPTALTNRFVKRQRMIYYLFWKL-YSTRLKVKEFEEFFDIPLNKVYG 358

Query: 360 ---RNLQRQGFIERVQFSRLRCTQRG 382
              R LQ  GF+ R +    + T +G
Sbjct: 359 LEFRLLQVLGFLTRDEEGY-KMTLKG 383


>gi|294636254|ref|ZP_06714664.1| HutW protein [Edwardsiella tarda ATCC 23685]
 gi|291090457|gb|EFE23018.1| HutW protein [Edwardsiella tarda ATCC 23685]
          Length = 361

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 137/336 (40%), Gaps = 14/336 (4%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            + L     I +I+FGGGTPS +  + +  ++  +  +  ++++ EIT+E    + +   
Sbjct: 1   AQPLQQSAPIHAIYFGGGTPSALSAEQLRRLIGQLRSSLPLAADCEITVEGRIFNFDAAR 60

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALP 180
                +AG NR S+G+Q+ + +  + +GR  +  EAIA +  LA      +  DL++ LP
Sbjct: 61  IDACLEAGANRFSIGIQTFDTRLRQRMGRRADRDEAIAFLRDLAERDRAAVICDLMFGLP 120

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT   W+ +L    +  +D + LY L +   T   K    G   +         Y    
Sbjct: 121 GQTAASWQNDLDIVSALPLDGVDLYALNLLPSTPLAKAVDSGRSQIADAAQRQAFYLHAL 180

Query: 241 SITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +  G H    S+ +    E +L+NL   +  D +  G GA   +   S+     +++
Sbjct: 181 EHLAQRGWHQLSNSHWARTTRERNLYNLLIKQGADCLAFGSGAGGHLNGQSYM----LQR 236

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA--GRNLDIE 357
              S+ + +      ++    LS+      +    L L+ GI     ++         + 
Sbjct: 237 DLTSYYRSLDARRKPLM---MLSAPAPQHHW---RLTLQGGIETGRLDLTTLLADPAPLL 290

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                 +Q  +  +Q   +  T RG     +++  L
Sbjct: 291 PLLQQWQQCDLLHLQQHCILLTARGRFWASNLLQAL 326


>gi|212695919|ref|ZP_03304047.1| hypothetical protein ANHYDRO_00452 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677042|gb|EEB36649.1| hypothetical protein ANHYDRO_00452 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 431

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 137/312 (43%), Gaps = 31/312 (9%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             NS  +Y++ PFC ++C YC + + V    V +  ++   L E+   + ++  + + +I
Sbjct: 123 APNSFNLYINIPFCPQRCKYCSYPTIVSNI-VDKNQYVDFLLKEI---KGISLDKKLDTI 178

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS +  +++  IL  + + +T     E T+EA    +++      +++  V RI
Sbjct: 179 YLGGGTPSNLSLKDLDRILSLLNEKFTFD---EFTLEAGREDTLDFEKLDLFKEKNVGRI 235

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  +  L  + R  +    I     A+++   ++ D I  L  +    ++   + 
Sbjct: 236 SLNPQTFSKNVLENVNRPIDFENFIKIYKYAKDLGFIINMDFIIGLFGENRESFKKNFEI 295

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+L+ + L  + G+ +++ + +GD+     N A+ +    +  T  +    Y +
Sbjct: 296 LKDLNPDNLTFHALAQKVGSKYFEENINGDI-----NEAIKISKDIEKFTKENSYKPYYL 350

Query: 254 SNHSFLGAESLHNLNY------WRY--------GDYIGIGPGAHSRVKVGSHRVAISIEK 299
                +   +L N+ Y       RY         + IG+G  A+S++  G        E+
Sbjct: 351 YRQKNIIG-NLENVGYEKGNTAQRYNILINEELENIIGLGMNANSKLMNGKKY---RNER 406

Query: 300 HPESWLKMVRKN 311
           +   + K + K 
Sbjct: 407 NLRDYYKNIEKE 418


>gi|212636717|ref|YP_002313242.1| coproporphyrinogen III oxidase [Shewanella piezotolerans WP3]
 gi|212558201|gb|ACJ30655.1| Coproporphyrinogen III oxidase, putative [Shewanella piezotolerans
           WP3]
          Length = 453

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 13/290 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFG 77
            +Y+H PFC K+C +C+F  +         +++Q    ++           +   +++ G
Sbjct: 57  ALYIHIPFCRKRCSFCNFFEN-GANPQRISDYMQQLCQQLMVAANSPFAQSQGFDTVYVG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ I    IA++ + I + + +  N E+T+E   +    + +    +AG NR S GV
Sbjct: 116 GGTPTDITASEIAMLGEAINR-FPLLDNAEVTLEGRLNGFNDDKWHNALEAGFNRFSFGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + +  R  GR  + ++ +  +  L+++    +  DLI+ LP QTM+ W+ +LQ  + 
Sbjct: 175 QSFDTEVRRAAGRFDDKAQLLQRLSTLSQHDSASIVVDLIFGLPGQTMSIWQQDLQAVID 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-------VLPSENVAVDLYNLTQSITSAHGLH 249
             V  + LYQL    GT   +  + G +                 +Y        ++   
Sbjct: 235 SGVHGVDLYQLIGLGGTRIDRASEKGKILGTDSSEFQADSQTRAQMYAYGADHLESNQWQ 294

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
                +      E S++N       + +  G GA   +       A S+ 
Sbjct: 295 RLSSCHWRRDARERSVYNSLAKSGIEILPFGAGAGGSIHGHGTMNARSLT 344


>gi|294142336|ref|YP_003558314.1| coproporphyrinogen III oxidase [Shewanella violacea DSS12]
 gi|293328805|dbj|BAJ03536.1| coproporphyrinogen III oxidase, putative [Shewanella violacea
           DSS12]
          Length = 460

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 22/308 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPR 69
           T   +    +Y+H PFC K+C +C+F  +          +++S   ++            
Sbjct: 43  TPTSATQRALYIHIPFCRKRCSFCNFFEN-GSNSARISRYVESLSQQLYTASKTPFVKSG 101

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  +++ GGGTP+ ++   I  I+    + + ++ N EIT+E   +      F     +G
Sbjct: 102 TFDTVYVGGGTPTDMQASEI-AIIGEAIQAFPLAKNAEITLEGRLNDFTDAKFDAALASG 160

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR S GVQS   Q     GR  N    I  +  L+++    +  DLI+ LP QTM  W 
Sbjct: 161 FNRFSFGVQSFNTQVRLAAGRFDNREVLIERLQELSKHPSASIVADLIFGLPGQTMEIWL 220

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN----------------VA 232
            +LQ  +  +V  + LYQL   +GT   K  +        E+                  
Sbjct: 221 QDLQDVIQSSVHGVDLYQLIGLQGTRLSKQAEKEKAKQTQEDGSQQKQQTLVPAVDSQTR 280

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
             +Y     +  + G       +      E S++N       + +  G GA   +     
Sbjct: 281 ASMYAAGARLLESSGWQRLSSCHWRRDNRERSIYNSLAKSGIEILPFGAGAGGNIHGHGM 340

Query: 292 RVAISIEK 299
             A  +  
Sbjct: 341 MNARDLSN 348


>gi|258592862|emb|CBE69171.1| Putative Oxygen-independent coproporphyrinogen III oxidase (modular
           protein) [NC10 bacterium 'Dutch sediment']
          Length = 817

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 79/410 (19%), Positives = 153/410 (37%), Gaps = 37/410 (9%)

Query: 7   YENNMTGQG-SNSLGVYVHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
            E  M        L VY+  P+C     ++C YC F S V + +   +++++   +E + 
Sbjct: 55  VERRMANAAIPKRLNVYIGTPYCLPTNPERCGYCLFPSEVYQGQTQLDSYLKYLESEGRR 114

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVN 120
            +       ++ I+FGGGT +L  P +   ++  +   +  +   +EIT+E  P      
Sbjct: 115 YQHFLEDEQLAGIYFGGGTSNLYRPDDYHRLMRIVRDVFPTIPPGIEITLEGIPQLFTRE 174

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
                + AG+NRIS+GVQ L+++ ++  GR   A  A   +     +  R S DLI+  P
Sbjct: 175 KLAAMKAAGINRISMGVQQLDDEMIKLSGRKQKARHAFQTLQWCEELGLRSSVDLIFGWP 234

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +QT      +L+  +   + H++ Y+L +   T F +  +D    LPS    +++Y +++
Sbjct: 235 QQTTELMLKDLEAIVGTGIGHITHYELNVAGRTDFARHRRD---ELPSTEQNLEMYRVSK 291

Query: 241 SITSAHGLHAYEISNHSFLG------AESLHNL--NYWRYG-------DYIGIGPGAHSR 285
               + G       +                N+   + R         D  G G    + 
Sbjct: 292 QFLESRGYRQVTAYDWEKTTPGLSGEYRFEENMRQAFARDADHGIVGYDMWGWGFAGVTY 351

Query: 286 VKVGSHR--VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISV 343
                               +   + ++          + +      L   L+    + V
Sbjct: 352 FPGTPEMPGWIYMNSTKAGEYFGRLDESRFPTERGFHYTHKDLGIATLFQMLQ-SMSVDV 410

Query: 344 KDWEMLAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
             +  L   NL  E     + L  +G+ E  +    + T     + D V 
Sbjct: 411 ALYNELFRVNLLEEYADIWQALVEKGWAEVDRN---KVT----LVGDGVF 453


>gi|332526060|ref|ZP_08402198.1| oxygen-independent coproporphyrinogen III oxidase [Rubrivivax
           benzoatilyticus JA2]
 gi|332109903|gb|EGJ10531.1| oxygen-independent coproporphyrinogen III oxidase [Rubrivivax
           benzoatilyticus JA2]
          Length = 450

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 79/396 (19%), Positives = 144/396 (36%), Gaps = 31/396 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSI 74
              + V    PFC   C  CD +    +     ++++   + E++ + QL G R  +   
Sbjct: 52  DEPIAVSARVPFCAAHCFCCDRDIRAAQPDDVIDDYVAGLVEEIREVAQLLGGRREVLQF 111

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
             GGGT S +    +A ++  +   W + ++++++ E +P  V    F+  R  G  R+S
Sbjct: 112 HLGGGTASELTGSQLARLVQAMQSEWRMPADIDMSCECDPRRVSQTMFEVLRGLGFRRVS 171

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQR 193
           LGV  L+    + +GR  +A+       LAR+     ++ D++  LP+QTM  W   + R
Sbjct: 172 LGVLDLDPGVQQAIGRRQSAALIDDVCELARSAGIEYINLDVMIGLPRQTMASWCTTIDR 231

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++   + + L +    +              LPS  +  +L   +  +    G      
Sbjct: 232 LIAMGPERIRLARYH-HRPWHAPAQVAIDTESLPSPALMAELARASAEMLRNAGYRWIGA 290

Query: 254 SNH-------SFLGAESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHP 301
                     S    +     +   Y        IG+G GA   V         S     
Sbjct: 291 DQFVLEHDDLSHAMDDGRLRRSLISYTAAPATPLIGLGVGAVGEVDGAMFWNDGS----Q 346

Query: 302 ESWLKMVRKNGHAVVEKEFLSS----EQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
            +W   +R     V +    +      + A E L+  L L      +  E   GR     
Sbjct: 347 AAWRNALRHGRLPVAQARPATPGSVQRRAAVERLLCSLELPAA-QAQGLEEGYGR----- 400

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                +  G + RV   R+  T+ G   L ++   L
Sbjct: 401 -LAAREADGLV-RVFDDRIVVTETGRHALHALCTEL 434


>gi|257469992|ref|ZP_05634084.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064218|ref|ZP_07928703.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689894|gb|EFS26729.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 422

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 153/392 (39%), Gaps = 44/392 (11%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ Q    E     Q           +FFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYIADEFDKYGQTEYFKKGIFDVVFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +P  + +IL+ I +N T++ + E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPHQLEIILESIKRNVTLAEDYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++  +F  R +   E +  +   +  F   +  D+IY  P+Q +     + +    
Sbjct: 168 QTFSDEGRKFYNRTYGKEETVERLKKLKAFFKGDVCVDIIYNFPEQKIEDVVEDAKIVKK 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   S Y L + +G+   K  +   + +    +   +   +    +      H  E++
Sbjct: 228 LEISSASFYSLMVHEGSKLSKDIEAEKVKMEEDMKRDYLLYQHFVDEMLRGDEYHILELT 287

Query: 255 NHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRV-KVGSHRVAISI------EKHPES 303
             +  G +      Y +     GD   IG GA   V  +G +R+   +       ++ E 
Sbjct: 288 KIARNGGDD---YKYIKVRNTGGDTFPIGVGAGGSVHGIGVYRMNKDMSFYSQQTEYHER 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           + K+       V+ KE L      +E L                         E     +
Sbjct: 345 FSKLSGIMQFPVISKESL-RNILKEEEL---------------------KYFAEKMEEYE 382

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +G ++    +    T  G+   +++  ++ +
Sbjct: 383 EKGLVKENDDNY-TLTTEGVFWGNNLSGDVII 413


>gi|296328686|ref|ZP_06871203.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154285|gb|EFG95086.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 411

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 161/400 (40%), Gaps = 33/400 (8%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + + + +  +  N  LG+Y H P+C K C +C+ N   ++     E + +    E++   
Sbjct: 28  NDFLDLLNRENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYG 85

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +      I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++    
Sbjct: 86  AYEFCKTSEIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEK 145

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            +   + GVNRIS+G+Q+   +  + L R ++    +  +   +  F   +  D+IY   
Sbjct: 146 LKIMEENGVNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKRFSGLVCIDIIYNYA 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLT 239
            QT  +   +         D  S Y L I  G+   K  +    + + +      L+NL 
Sbjct: 206 NQTDEEVLQDADLLAEVGADSASFYSLMIHDGSNISKEREKDKSVYIYNLARDEKLHNLF 265

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE 298
            +     G    E++  +       +  N     + + IG GA   +  +G++ +   + 
Sbjct: 266 YNRCIEKGYKLLELTKITNGRDAYKYIRNNNGLRNLLPIGAGAGGHIQDIGAYNMNQQMS 325

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN---LD 355
            + ++                 LS        ++ GL   +   ++  +         + 
Sbjct: 326 FYSKT-----------TEISHNLS--------MISGLMQFDKFDLEVIKKYCNEESYKII 366

Query: 356 IECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
               +  +++G+I+    F+  +   +G+   +S++A++ 
Sbjct: 367 YRKLKEFEKEGYIKIENNFAIYQL--KGIFWGNSLVADII 404


>gi|303230760|ref|ZP_07317507.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514520|gb|EFL56515.1| coproporphyrinogen dehydrogenase HemZ [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 441

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 144/339 (42%), Gaps = 29/339 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +Y   +  + + +    + +Y   PFC  +C YC F   + +    Q  FI + L ++  
Sbjct: 105 QYQRPFLESHSNKD---ISLYCGIPFCETRCVYCSFPYGLYQEYHRQSEFIAALLDDIDD 161

Query: 62  MRQLTGPRSIS--SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           +RQ+    ++   +++ GGGTP+++  ++   +L G++         E T+EA  P S+ 
Sbjct: 162 VRQICETYNLHTNTLYMGGGTPTILNNEDFHHVLTGLSTLIP--KGHEFTVEAGRPDSIT 219

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIY 177
               Q  +   VNRIS+  Q++++  LR +GR H+A +        +      ++ D I 
Sbjct: 220 TEKIQSMQACHVNRISINPQTMDDTILRRIGRGHSAQDIDDMYQYVKKHTDFAVNMDFIA 279

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP Q +      +        ++++++ L I++G+  Y ++   D+  P E++   +  
Sbjct: 280 GLPGQNIKHMVHNMDYICHNLPENVTIHTLAIKRGSPLYDLNMQHDV--PDESIVKHMVQ 337

Query: 238 LTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYGDYIG-IGPGAHS 284
             Q      G   Y            E   ++  G    +N+        I  +GPG  S
Sbjct: 338 YAQERLEQAGYVPYYLYRQQYMRGQLENIGYTLPGQACEYNIQIMEERQTIMSMGPGGSS 397

Query: 285 R-VKVGSHRVAIS-IEKHPESW---LKMVRKNGHAVVEK 318
           + +K  + R     + K  + +   LK +    HA+ + 
Sbjct: 398 KWIKAPAFRQKKQHMPKDVDVYTDTLKALLAKRHALCKS 436


>gi|237740604|ref|ZP_04571085.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422621|gb|EEO37668.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 411

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 76/387 (19%), Positives = 157/387 (40%), Gaps = 30/387 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISS 73
           S  L +Y H P+C K C +C+ N   ++     E++ +    E++            +  
Sbjct: 40  SKQLALYFHTPYCDKICSFCNMNR--KQLDNDLEDYTKYICDEIKKYGAYKFCKTSEVDV 97

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +FFGGGTP++ + + +  IL  + +N+  S + E+T E    ++     +   K GVNRI
Sbjct: 98  VFFGGGTPTIFKKEQLERILKTLRENFIFSKDYEMTFETTLHNLSFEKLEIMEKYGVNRI 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQ 192
           S+G+Q+   +  + L R ++ +  +  +   +  F   +  D+IY    QT  +   + +
Sbjct: 158 SVGIQTFSNRGRKLLNRTYDKNYVVERLKEIKKRFSGLICIDIIYNYAGQTDEEILEDAR 217

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQSITSAHGLHAY 251
                 VD  S Y L I  G+   K  +    +   S     +L+NL       +     
Sbjct: 218 LLSEIKVDSTSFYSLMIHDGSDISKEREKDKSIYTYSLKRDEELHNLFYEACIENSYELL 277

Query: 252 EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E++  S    +  +  N     + + IG GA   ++        ++ +    + +    N
Sbjct: 278 ELTKLSNGKDKYKYIRNNNSLKNLLPIGVGAGGHIQDIE---IYNMNQQVSFYSRTSELN 334

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFI 368
                    LS        ++ GL   E  S+ + +      +  E     +  + +G+I
Sbjct: 335 YK-------LS--------MISGLMQFEKFSLLEIQKYCDEKIYREIFKRLKEFEDKGYI 379

Query: 369 E-RVQFSRLRCTQRGMTMLDSVIANLA 394
           +    F+  +   +G+   +S++A++ 
Sbjct: 380 KIENNFAIYQL--KGIFWGNSLVADII 404


>gi|157963155|ref|YP_001503189.1| coproporphyrinogen III oxidase [Shewanella pealeana ATCC 700345]
 gi|157848155|gb|ABV88654.1| Coproporphyrinogen dehydrogenase [Shewanella pealeana ATCC 700345]
          Length = 479

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 139/398 (34%), Gaps = 43/398 (10%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFG 77
            +Y+H PFC K+C +C+F  +    +     +I++   ++       L   R  ++++ G
Sbjct: 57  ALYIHIPFCRKRCTFCNFFENGTNPE-RISRYIKNLTQQLHIAADTPLAQSRGFNTVYVG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ I    +  + + I   + +  N E+T+E   +  + + +      G NR S GV
Sbjct: 116 GGTPTDISSDEVKQLGEAI-SRFPLVDNAEVTLEGRLNGFDDDKWHNATANGFNRFSFGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q  +  GR  +    +  +          +  DLI+ LP QT+  W+ +LQ  + 
Sbjct: 175 QSFDTQVRQAAGRFDDKDFLLNRLQQLSQHPSASIVIDLIFGLPGQTLDVWQQDLQAVID 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-------VLPSENVAVDLYNLTQSITSAHGLH 249
             V  + LYQL    GT      + G +                 +Y    +   A    
Sbjct: 235 SGVHGVDLYQLIGLSGTRIEHAREKGKILGTALSEFQADSQTRAKMYASGANHFEAQNWQ 294

Query: 250 AYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
                +      E S++N       + +  G GA   +          ++K    W +  
Sbjct: 295 RLSSCHWRRDSRERSVYNSLAKSGIEILPFGAGAGGSIHGHGCMNGRDLKK----WHQAH 350

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMG-----LRLREGISVKDWEMLAGRNLD-------- 355
            +        E ++++  A E +          L         + +  R LD        
Sbjct: 351 DEVTSP---NELIANDSIATEPMANAPVQVPGMLMSPNPSASLDAIFKRGLDGGKLNLSL 407

Query: 356 ---------IECERNLQRQGFIERVQFSRLRCTQRGMT 384
                           Q  G  E VQ  +L  T  G  
Sbjct: 408 LPSAMALHLSPLFSAWQNNGLAELVQ-DQLTLTLAGRF 444


>gi|163733958|ref|ZP_02141400.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
 gi|161393069|gb|EDQ17396.1| coproporphyrinogen III oxidase [Roseobacter litoralis Och 149]
          Length = 372

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 133/361 (36%), Gaps = 22/361 (6%)

Query: 50  NFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
            ++ +   E+  +  L     S+S + +GGGTP+L E   I  +   I+    ++ + E 
Sbjct: 3   AYLSTLKAELSLLADLLPADISLSRVHWGGGTPTLFEAAMIEDLAGSISDVAPLAPHGEF 62

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           ++E +P+ ++ +       AG+ R S+GVQ  + +    +GR  +      A  + R   
Sbjct: 63  SVEVDPNEIDQSRVDALAAAGMTRASIGVQDFDVEIQTTIGRLQSFDVTRYAADMLRASG 122

Query: 169 -PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              ++ D+++ LP QT  +    +Q+ L+ + D ++LY        +  +       VLP
Sbjct: 123 IKSLNTDILFGLPHQTTEKIAASVQKLLTLSPDRVALYGYAHVP-WMARRQSLIPSDVLP 181

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRYGD-----Y 275
           +    + L+   + +    G     I + +                 N+  Y D      
Sbjct: 182 TPEERLKLFETARQLFEWDGYRQIGIDHFAVPHDTLAVASKTGKLRRNFQGYTDEPAEVL 241

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
           IG+G  A SR   G  +   S       + K +R    +       S + +    L+  +
Sbjct: 242 IGLGASAISRFPQGYAQNNPSTS----GYTKSIRTGELSTSRGHRFSEDDKLRGRLIEAI 297

Query: 336 RLREGISVKDWEMLAGRN---LDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
                + + D           +     R     G I +++  R +    G  +   +  +
Sbjct: 298 MCDFEVDIDDMVARFPNREAHIRALLGRAAAHFGDIVQLKEDRFQVLPDGHALARIIARH 357

Query: 393 L 393
            
Sbjct: 358 F 358


>gi|227485573|ref|ZP_03915889.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227236439|gb|EEI86454.1| possible coproporphyrinogen dehydrogenase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 433

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 141/346 (40%), Gaps = 41/346 (11%)

Query: 1   MKYLSAYENNMTGQG--SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE 58
           +K L   + N        +   +Y++ PFC  +C YC + + +  +   +  ++   + E
Sbjct: 109 LKLLEKVKENQGRLSVCQDDFSLYINIPFCPTRCDYCSYPTLIGSHH-DKGTYVAYLIRE 167

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
           ++   ++  P ++ SI+ GGGTPS +    I  IL  I K +T     E+T EA    ++
Sbjct: 168 IE---EINLPSNLDSIYIGGGTPSYLTADEIEKILTSINKKFTYK---ELTFEAGREDTL 221

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
           ++   +  +  GV RISL  Q+   + L+ L R+ +    +     A+++   ++ D I 
Sbjct: 222 DIKKLEILKAGGVLRISLNPQTFNREILQKLNRDIDMDHFLKIYKAAKDLGFIVNMDFIV 281

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            L  +++  +            D+++ + L I+ G+ + +    G+        ++ +  
Sbjct: 282 GLEGESVDDFSKNFPILQDLLPDNITFHALAIKSGSKYNEKGSTGE-----REDSLKIAE 336

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRY--------------GDYIGIGPGAH 283
                T  +    Y +     + + +L N+ Y R               G  +G+G  A+
Sbjct: 337 KIGDFTRENAYEPYYLYRQKNIIS-NLENVGYQRNNTAQRYNVIINEEIGSILGLGMNAN 395

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           S++  G         ++   + +   KN         L+  +  +E
Sbjct: 396 SKLLTGKK---FRNPRNLRDYYQDFEKN--------LLAKNEMIEE 430


>gi|316934726|ref|YP_004109708.1| Radical SAM domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315602440|gb|ADU44975.1| Radical SAM domain protein [Rhodopseudomonas palustris DX-1]
          Length = 451

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 82/350 (23%), Positives = 138/350 (39%), Gaps = 11/350 (3%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           +  E       S S   Y+H P+C   C +C F  +V R + G   ++   + E+     
Sbjct: 46  AVIERVFATPRSESAVAYLHVPYCQNHCLFCGFFENVWRPEAG-PAYVDDLIAELAAKSH 104

Query: 65  --LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L     I +++ GGGTPS ++  ++A ++  + +   +S++ EIT+E       +   
Sbjct: 105 TPLVSSAPIEAVYIGGGTPSALDADDLARLIAALHRYLPLSADCEITLEGRSYGFGIERA 164

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPK 181
                AGVNR+S+GVQS      R LGR     E  A +     +    +  DLIY LP 
Sbjct: 165 AKLADAGVNRLSIGVQSFSTDVRRRLGRKRAGDEVAAFLSELMALGRTSVVCDLIYGLPG 224

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQ 240
           Q+   W  ++       +D ++LY L +  G    +  + G L  P+   A    Y    
Sbjct: 225 QSEADWRRDIDTVGRVGLDGVTLYALNMFPGGPMARAVEHGKLPPPATPAAQARLYAEGV 284

Query: 241 SITSAHGLHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
              +  G      S+    L   + +N +  R    +  G GA  +      R  I I +
Sbjct: 285 ERLTDRGWLQVSQSHLVRSLRERNRYNASIKRGVACLPFGAGAGGQAHGHRWRNVIDIAR 344

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             E    M+ +N  A +E   L     A   ++        + +   E L
Sbjct: 345 RRE----MIARNA-APIEGLALVPSDHAAHAMIAAGLETGRLDLAAVEAL 389


>gi|91976826|ref|YP_569485.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris BisB5]
 gi|91683282|gb|ABE39584.1| coproporphyrinogen III oxidase, anaerobic [Rhodopseudomonas
           palustris BisB5]
          Length = 480

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 131/360 (36%), Gaps = 13/360 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGG 79
           YVH PFC  +C +C F  +  R + G   ++   L E+       L     I +++ GGG
Sbjct: 90  YVHVPFCQTRCLFCGFFQNAWRPEAG-AAYVDDLLAELAIRSTTALVSSAPIDAVYIGGG 148

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS +   ++  +++G+  +  ++S+ EIT+E      ++         GV R+S+GVQ+
Sbjct: 149 TPSALAADDLVRLVEGLRHHLPLTSDCEITLEGRAFGFDLAKAAKVADVGVTRMSIGVQT 208

Query: 140 LEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  R LGR  +  E  + +  L       +  DLIY LP     +W  +++      
Sbjct: 209 FSTEVRRRLGRKLSGPEVQSFLTDLVALGRTAVVCDLIYGLPGHDGAEWCRDIEIVDQIG 268

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN-VAVDLYNLTQSITSAHGLHAYEISNHS 257
           +D ++LY L    G       + G L  P+        Y       +A G      S+  
Sbjct: 269 IDGVTLYALNTFPGGPLASAIEKGKLSPPATPGEQARAYADAVERLAALGWLQVSQSHLV 328

Query: 258 FLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
               E + +N    R    +       +     +H              +M+ ++   V 
Sbjct: 329 RSVREFNRYNAAIKRGVTCLPF----GAGAGGQAHGYRWRNVIEIAQRREMIAQHREPV- 383

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEM-LAGRNLDIE-CERNLQRQGFIERVQFS 374
           E   L     A   ++        + +   E    G  + +     N    G  E     
Sbjct: 384 EALALVPPDHAAHAMIAAGLEAGRLDLVAIEALRPGFRVAVAPLLANWAAAGLGELSGDG 443


>gi|254673678|emb|CBA09274.1| putative porphyrin oxidoreductase [Neisseria meningitidis alpha275]
          Length = 216

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 6/195 (3%)

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S Y LT+E  T F      G   LP +  A+D+ +         G   YE S  +
Sbjct: 22  GATHISAYHLTMEPNTPFGHTPPKG---LPQDEAALDIEDAVHGALEGAGFVHYETSAFA 78

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               +  HNLNYW++GDY+GIG GAH ++            +HP  +L +++      VE
Sbjct: 79  KPAMQCRHNLNYWQFGDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVE 138

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSR 375
           ++ +++E    EF+M  LRL +G+     +   G      +      +++G +E    + 
Sbjct: 139 RKTVAAEDLPFEFMMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLE-TDPAV 197

Query: 376 LRCTQRGMTMLDSVI 390
            R T++G   L+ ++
Sbjct: 198 FRPTEKGRLFLNDLL 212


>gi|256827561|ref|YP_003151520.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
 gi|256583704|gb|ACU94838.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
          Length = 435

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 73/392 (18%), Positives = 140/392 (35%), Gaps = 27/392 (6%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             +      +Y+H PFC + CPYC FN      +     +  S   EM  + +L      
Sbjct: 31  PPEPGKHYMLYMHVPFCERLCPYCSFNRFPFS-EDRARPYFDSLRREMLMLAEL--GYDF 87

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            S++ GGGTP+++    +   +D   K +++    E++ E NP+ +     +      V 
Sbjct: 88  DSLYIGGGTPTIM-IDELVRTIDLARKTFSIK---EVSSETNPNHLIEPYLEQL-DGRVQ 142

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S+GVQS +   L  +GR     +A      I  A   F  M+ D+I+  P QT     
Sbjct: 143 RLSVGVQSFDNGLLDQMGRLQKYGDAETIFERIRTASPHFLSMNVDMIFNFPAQTEDILI 202

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L   L       + Y L                +           Y++       +G 
Sbjct: 203 NDLAWVLESGATQTTFYPLMASPAVECS---LAATVGKVDYAREAHFYDIIWRTLLDNGF 259

Query: 249 HAYEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
                S  +F  + S     Y   Y +Y  IG G  + +    +    S+    + + + 
Sbjct: 260 TL--SSAWTFDKSASGMIDEYVVDYEEYPAIGSGGITYLGHTLYVNTFSV----KEYNER 313

Query: 308 VRKNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQ 363
           +     ++         Q+    F+M    LR  +  + ++   G +++         + 
Sbjct: 314 IASGRMSMSAATHFDFHQRMRYRFMMQLFGLR--LDKQQFKRDFGCSVERGLPGEMAFMI 371

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             G         L  T +G  ++ +++    +
Sbjct: 372 AAGAFATNNSDELTLTPKGRYLMVAMMRQFFI 403


>gi|308051418|ref|YP_003914984.1| coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
 gi|307633608|gb|ADN77910.1| Coproporphyrinogen dehydrogenase [Ferrimonas balearica DSM 9799]
          Length = 444

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 144/374 (38%), Gaps = 28/374 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   C +C F+  + + +  +  FI S   EM+  + L        ++ GGGT
Sbjct: 62  LYMHVPFCHTLCSFCTFHRFLFKEEKARAYFI-SLRKEMEMAKAL--GYDFEELYIGGGT 118

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +++    +A  ++            +++ E++P  +    F       V+R+S+GVQS 
Sbjct: 119 TTVL-VDELARTIEHARNL--FPGIKQVSCESDPLHLTSAEFTQLHGL-VDRLSVGVQSF 174

Query: 141 EEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
               L    R     E       +  A++ FP ++ D+I+    QT    + ++      
Sbjct: 175 NRDILARTDRLEKFGEPEVVYEKLLRAKDNFPILNVDMIFGFQGQTEEVLQNDMDMLTRL 234

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               ++ Y L +   T   +    G+L    +++    Y L  +    H     +++  S
Sbjct: 235 GPRQITTYPLMVTHQT---RKSAKGNLAAADQDI-RKDYELILNSLKGHYD---QLTAWS 287

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F  +       Y   Y DY+G+G G+ S +    +  + S+ +    + + +      V 
Sbjct: 288 FGKSNEEGFDEYVVNYDDYLGLGSGSFSFLHDTLYVNSFSLRR----YQERIAAGKMGVE 343

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFI--ERV 371
             +  S         ++ L     IS   ++   G +  +   + +      G +  +  
Sbjct: 344 SSKHYSRHAVMQYRFLLNL-FGGRISKSYFKDQFGVSPYLGLAKEMAFMHATGCLKQDPT 402

Query: 372 QFSRLRCTQRGMTM 385
              +L+ T  G+ M
Sbjct: 403 DADKLQATPNGLMM 416


>gi|294783721|ref|ZP_06749045.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480599|gb|EFG28376.1| oxygen-independent coproporphyrinogen III oxidase 2 [Fusobacterium
           sp. 1_1_41FAA]
          Length = 469

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/336 (22%), Positives = 147/336 (43%), Gaps = 28/336 (8%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWM 62
           +  +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E+Q +
Sbjct: 132 TVVKKELELLDKEHINLYLGIPFCPTKCKYCSFASYEIGGGVGRFYNDFVEALLKEIQII 191

Query: 63  RQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
                   + +SSI+FGGGTPS +   ++  +L  + +N  +S   E T EA    S+ +
Sbjct: 192 GNFLKTYNKKVSSIYFGGGTPSTLTEIDLERVLKKLLENIDMSDVKEFTFEAGREDSLNI 251

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              +  +K  V+RISL  QS   ++L+ + R  N          A+N+   ++ DLI  L
Sbjct: 252 KKLEIMKKYSVDRISLNPQSFNLETLKRVNRRFNRENFDLIFKEAKNLGFIINMDLIMGL 311

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P++T  +    L +  +Y +D+L+++ L  ++ +  +K     +    +      +    
Sbjct: 312 PEETTEEILDTLAQLNAYDIDNLTIHCLAFKRASKLFK-----ESQERNSIDRALIEEHI 366

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV 286
           Q I     +  Y            E   +S  G ES+ N+       + + +G G  S++
Sbjct: 367 QEIVKNKEMKPYYMYRQKNIIEWGENIGYSKEGKESIFNIEMIEENQNTMALGGGGISKI 426

Query: 287 KVGSHRVAISIEKH-----PESWLKMVRKNGHAVVE 317
            +        IE++     P  +++ + K     +E
Sbjct: 427 VIEERNGIDYIERYVNPKDPALYIRELDKRCKEKIE 462


>gi|237738144|ref|ZP_04568625.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420024|gb|EEO35071.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 471

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/327 (21%), Positives = 142/327 (43%), Gaps = 22/327 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQW 61
           +   +  +       + +Y+  PFC  KC YC F S+     VG+   +F+++ L E++ 
Sbjct: 133 IEIVKKELEFLDRKHINLYIGIPFCPTKCKYCSFASYEIGSGVGRYYNDFVKTLLDEIEL 192

Query: 62  MRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
             +        ISS++ GGGTPS +  +++  +L  +  +  +S   E T EA    ++ 
Sbjct: 193 TGKFLREENFKISSLYIGGGTPSTLIEKDLEDVLKAVNTHIDMSDVREFTFEAGREDTLT 252

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
               +  +K GV+RISL  Q+ + ++LR + R  +          A+ +   ++ D+I  
Sbjct: 253 DEKLEIAKKYGVDRISLNPQTFKVETLRKVNRKFDRENFEKYFKKAKELGFIVNMDIIVG 312

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP +T       L     + +++L+++ L  ++ +  +K  +  D V        +    
Sbjct: 313 LPDETTEDILYTLGELEKFDIENLTIHTLAFKRASNLFK--ESQDRVELDGKTITEAIKR 370

Query: 239 TQSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKV 288
                  H  + Y         E   +S LG ES+ N+         +G+G GA +++ +
Sbjct: 371 LVEKKDIHPYYMYRQKNIMEWGENIGYSKLGCESVFNIEMIEENQSTMGLGGGAITKIVI 430

Query: 289 GSHRVAISIEKH-----PESWLKMVRK 310
             +     IE++     P  +++ + +
Sbjct: 431 PENEYRDYIERYVNPKDPALYIREMSE 457


>gi|323142307|ref|ZP_08077139.1| coproporphyrinogen dehydrogenase HemZ [Phascolarctobacterium sp.
           YIT 12067]
 gi|322413191|gb|EFY04078.1| coproporphyrinogen dehydrogenase HemZ [Phascolarctobacterium sp.
           YIT 12067]
          Length = 488

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 29/317 (9%)

Query: 20  GVYVHWPFCVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFF 76
           G+Y+  P+C  +C YC F +  V + +  Q+NF+     ++Q + QL G     + S++ 
Sbjct: 159 GIYIGVPYCPSRCSYCSFPAGIVPQDEESQQNFVNMIEQDLQNVVQLIGMHSLRVKSLYI 218

Query: 77  GGGTPSLIEPQNIALILDGIAKN------WTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           GGGTP+ +  +  A +L  + +         +    E T+EA  P             AG
Sbjct: 219 GGGTPTSLSDKVFARLLQAVERRLLQSNCEGLRHLREFTVEAGRPDCFSAAKLAAMEAAG 278

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWE 188
           VNRIS+  QS  +++L+ +GR H+  +   A  L R    P ++ DLI  LP++T  +  
Sbjct: 279 VNRISVNPQSFHDKTLQLIGRRHSVKDFYNAYELVRKSRIPVVNVDLIIGLPQETEQEIA 338

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L++A+  A ++L+++ LT+++    ++  +   L   +   A  +      + +A GL
Sbjct: 339 YSLEQAVKLAPENLTVHTLTLKRSAPLFQKQEQAVL---TTQAAEKMVQRAAEMAAAIGL 395

Query: 249 HAYEIS------------NHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRV--KVGSHRV 293
             Y +              ++  G ES++N+         IG+GP + S+V    G H  
Sbjct: 396 EPYYLYRQHYMLGHLANIGYAKPGTESIYNIQMMEERHPVIGVGPASASKVPLPDGHHLH 455

Query: 294 AISIEKHPESWLKMVRK 310
            +++ K+   +   +++
Sbjct: 456 KLNMPKNVAVYGARLQE 472


>gi|325845774|ref|ZP_08169038.1| coproporphyrinogen dehydrogenase HemZ [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481912|gb|EGC84943.1| coproporphyrinogen dehydrogenase HemZ [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 431

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/332 (19%), Positives = 140/332 (42%), Gaps = 39/332 (11%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
             NS  +Y++ PFC ++C YC + + V    V +  ++   L E+   + +   + + +I
Sbjct: 123 NPNSFNLYINIPFCPQRCKYCSYPTIVSNI-VDKNQYVDFLLKEI---KGINLDKKLDTI 178

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS +  +++  IL  + + +T     E T+EA    +++      +++  V RI
Sbjct: 179 YLGGGTPSNLPLKDLDRILSLVNEKFTFD---EFTLEAGREDTLDFEKLDLFKEKNVGRI 235

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+  +  L  + R  +    I     A+++   ++ D I  L  +    +    + 
Sbjct: 236 SLNPQTFSKNVLENVNRPIDFENFIKIYQYAKDLGFVINMDFIIGLFGENRESFRKNFEI 295

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+L+ + L  + G+ +++ + +GD+     N A+ +    +  T  +    Y +
Sbjct: 296 LKDLKPDNLTFHALAQKVGSKYFEENINGDI-----NEAIKISKDIEKFTKENSYKPYYL 350

Query: 254 SNHSFLGAESLHNLNY------WRY--------GDYIGIGPGAHSRVKVGSHRVAISIEK 299
                +   +L N  Y       RY         + IG+G  A+S++  G        E+
Sbjct: 351 YRQKNIIG-NLENGGYEKGNTAQRYNILINEELENIIGLGMNANSKLMNGKKY---RNER 406

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
           +   + + +        EKE     +  + F+
Sbjct: 407 NLRDYYENI--------EKEISDKNKLIENFM 430


>gi|88798376|ref|ZP_01113961.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
 gi|88778816|gb|EAR10006.1| coproporphyrinogen III oxidase [Reinekea sp. MED297]
          Length = 413

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 135/325 (41%), Gaps = 23/325 (7%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              + +Y+H PFC   C YC F+  +       + + Q+   ++  + +      +S ++
Sbjct: 36  PTPVALYLHIPFCESLCTYCSFHRQLL-DPALAKAYFQALRQQITAVAEAGW--QVSQVY 92

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTP+++ PQ +A  L  + +++ +     I++E NP+ +  +  +      V+R+S+
Sbjct: 93  IGGGTPTVL-PQELASTLSLLTEHFGLVP---ISVETNPNHLTTDVIEMLSARDVSRLSI 148

Query: 136 GVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           GVQS ++  L+ + R     ++      +      FP ++ DLI+ LP Q+      +L 
Sbjct: 149 GVQSFDDDLLQKMNRRLAYGDSEAIQERLAWVNRRFPTVNVDLIFNLPGQSERSLRRDLA 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +  +  +S Y L         +   +  L           +   +   SA     Y+
Sbjct: 209 IVNALQLSQVSWYPLM---PNDSVQGTLEASLGRWQRKTEWKGFKAIRRALSA----QYQ 261

Query: 253 I-SNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
             S   + LG +   +  +    DY+G+G G+ S +    +  +     H   ++  ++ 
Sbjct: 262 PSSAWCYNLGHQPQSDEYFVNSPDYLGLGSGSFSFIDRTLYASSF----HIPEYIGHMQT 317

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGL 335
               +  ++  S  +     LMM L
Sbjct: 318 RPLTMNAQQTFSDLEWMQYRLMMQL 342


>gi|331001738|ref|ZP_08325260.1| hypothetical protein HMPREF0491_00122 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412712|gb|EGG92095.1| hypothetical protein HMPREF0491_00122 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 417

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/385 (20%), Positives = 158/385 (41%), Gaps = 27/385 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           + + ++  +        G+YVH PFC   C +C +   +   K     +I + + E+  +
Sbjct: 21  FTNDFDKVLPYDEGAEFGLYVHIPFCKSICNFCPYCKVIYDEKTANV-YIDALIKEIHLV 79

Query: 63  -RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
            +Q  G R  +S++FGGGTP+L+    I  I+  +++++ ++    I IE +P +V +  
Sbjct: 80  GKQWNGRRKATSLYFGGGTPALL-ADRITDIIAALSEHFIITDG--IGIELHPDNVNIPV 136

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALP 180
            +  +KAGV++IS+G+QS +++  + L R   +  +   A++     F  +S D I+ALP
Sbjct: 137 LKTLKKAGVDKISIGIQSFQDKYQKVLQRRKFDIKDMSNALNEVE--FETVSMDFIFALP 194

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            QT    + ++  A +   +H+++Y L     T   K+              +  Y +  
Sbjct: 195 TQTFEDLKNDIDMAFANGANHIAIYPLIDFTFTE-NKVPIMPKKEKRKLLDDITNYCIG- 252

Query: 241 SITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
                +   +          + SL         ++ G G  A S  K        S+ + 
Sbjct: 253 ---KGYVRKSIWTFASDKSASYSL-----MTRDNFFGFGCSATSLFKDQFKINTFSVLE- 303

Query: 301 PESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
              + K +  +             Q+   +L   L     + V+++       L+     
Sbjct: 304 ---YCKRIDADTLPTALTNRFVKRQRMIYYLFWKL-YSTRLKVEEFGEFFDIPLNKVYGL 359

Query: 361 N---LQRQGFIERVQFSRLRCTQRG 382
               LQ  GF+ R +    + T +G
Sbjct: 360 EFWLLQMLGFLTRDEEGY-KMTLKG 383


>gi|257789814|ref|YP_003180420.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
 gi|257473711|gb|ACV54031.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
          Length = 438

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 147/390 (37%), Gaps = 32/390 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN      +     +  +   EM  ++ L       S++ GGGT
Sbjct: 40  LYMHVPFCERLCPYCSFNRFPF-AEDRARPYFANMRKEMLMLKDL--GYDFESLYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    I  + D I       S  E++ E NP+ +  +      +  V R+S+GVQS 
Sbjct: 97  PTIM----IDELCDTIDMARETFSIGEVSSETNPNHLIPSYLDKL-QGRVQRLSVGVQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   L+ + R     +  E +  I  A   F  ++ D+I+  P QT      +++R +  
Sbjct: 152 DNDLLKQMDRYDKYGSGEEILERIGEASPYFTSLNVDMIFNFPAQTEDVLFSDIERVVES 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNH 256
                + Y L                +           Y +   + +      +E  S  
Sbjct: 212 GTSQTTFYPLMASPS---VARSLARTVGKVDYAREQRFYEIISEVLAGGENPLFEHGSAW 268

Query: 257 SF-------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +F        G +++ +     Y +Y  IG G  + +    +    S+      +   + 
Sbjct: 269 TFNKRGTGAAGEDAMIDEYVVDYEEYPAIGSGGITYLGNNLYVNTFSVN----DYNDAIE 324

Query: 310 KNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQ 365
            +  +++ K   S   Q    F+M    LR  +  + ++   G +++         ++  
Sbjct: 325 HDRMSLMGKATFSKHDQMRYRFMMQLFGLR--LDKRQFKKDFGVSVERGLPVEMAFMKAS 382

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G  +R     L  T +G  ++  ++    +
Sbjct: 383 GAFDRDNADELTLTPKGRYLMVVMMRQFFI 412


>gi|326204235|ref|ZP_08194094.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325985510|gb|EGD46347.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 434

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 159/368 (43%), Gaps = 36/368 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGG 78
           +Y+H PFC   C  C ++  V +  +  E ++++ + E++++ +      I +  ++FGG
Sbjct: 57  IYIHVPFCDSFCRDCPYSKSVNKGNL--EKYVRALIKEIEFIGKNKNNSKIRAKAVYFGG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+++    ++ I+  + + + V  +  IT+E++P S++ +N   YR AG+NRISLG+Q
Sbjct: 115 GTPTVLSAHQLSDIIGKLKEYF-VDESTSITLESHPKSLDCDNLSKYRDAGINRISLGIQ 173

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++  L+ +GR+++++ A+             + D++Y    +T   +  +L+RA+ + 
Sbjct: 174 SFQDSVLKEMGRDYDSNRALEVARKVSEAGWNFNVDIMYGFDSETDEMFYEDLERAIQFN 233

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +H+S+Y L           + D            D+Y   +      G   Y+I++ + 
Sbjct: 234 ANHISIYGLM---------RNTDNKTKEAMIKRETDMYFHARKRLLDEGFVHYKINDFAR 284

Query: 259 LGAESLHNLNYWRYGDY---------IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                   +N   Y D          + +G   H       + +     K  + ++  + 
Sbjct: 285 DDKS----INV--YADLRDRIPLHENLALGTSGHGMTASAGNYLKY---KSIDKYIDCIE 335

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECERNLQRQG 366
           K    +        E      +  GL     IS + ++     +      +  ++L R G
Sbjct: 336 KEIPPLSYVNCNDKEGDIVSNIFYGLNSLN-ISRRKFKQQFDADPVENTNDFIKHLARLG 394

Query: 367 FIERVQFS 374
           F++     
Sbjct: 395 FLDITDEE 402


>gi|255323314|ref|ZP_05364448.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           showae RM3277]
 gi|255299606|gb|EET78889.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           showae RM3277]
          Length = 407

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 128/300 (42%), Gaps = 14/300 (4%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C  N    + +   +++ Q  L E++          ++I S++FGG
Sbjct: 42  IYIHVPFCDNICSFCSMNR--TKLEDELDSYTQYLLGEIKKYGKFPYLQAKNIRSVYFGG 99

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++++ +++  I+  +  ++ ++ + E ++E    ++ ++  +     GVNR S+GVQ
Sbjct: 100 GTPTILKEKHLEPIITALRSSFNIAEDCEFSLETTLHNLNLSKVRLLESLGVNRFSIGVQ 159

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++  + L R H+   AI  + + R  F   +  D+I+  P+QT+ +   + +     
Sbjct: 160 TFSDKGRKLLNRVHDKKGAIEHLKMIRQNFSGMVCTDIIFNYPEQTIDEVLEDARLVDEL 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +D  S Y L + + +   K        +  E+   + +   + +        YE+  H+
Sbjct: 220 NIDSTSFYSLQLFEKSELAKTVSQDYYDVNYEHKLHNAFF--EKLLGT---GNYEVLEHT 274

Query: 258 FLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
                      Y R      D + +G G+  ++       A    +         R  G 
Sbjct: 275 KFNRIGRDRYQYIRLSHEGADILPLGRGSGGKLGYYDIYNAKEKMRMINKVDDKQRAEGR 334


>gi|253584061|ref|ZP_04861259.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251834633|gb|EES63196.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 422

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 80/392 (20%), Positives = 160/392 (40%), Gaps = 44/392 (11%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ Q    E       +         IFFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYLADEFDKYGRTEYFKKGIFDVIFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +PQ + +IL+ I +N  ++ N E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPQQLEIILESIKRNVVLAENYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  E   +F  R +   E I  +   +  F   +  D+IY  P QT+ +   + +    
Sbjct: 168 QTFSEAGRKFYNRTYGKEETIEKLKKLKEFFKGDVCVDIIYNFPNQTINEVLEDARIVKK 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   S Y L + +G+   K  +   + +    +   +   +    +   +  H  E++
Sbjct: 228 LEISSASFYSLMVHEGSKLSKDIEAEKVKMEEDMKKDYLLYQHFVDEMLRGNQYHILELT 287

Query: 255 NHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRV-KVGSHRVAISI------EKHPES 303
             +  G +      Y +     GD   IG GA   V  +G +R++  +       ++ E 
Sbjct: 288 KIARNGGDD---YKYIKVRNTGGDTFPIGVGAGGSVHGIGVYRMSKEMSFYSQQTEYHER 344

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           + K+       V+ KE L  +    E  +   R                    E  +  +
Sbjct: 345 FSKLSGIMQFPVISKEAL--KDILKEEELKFFR--------------------ERMKEYE 382

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            +G ++  + S +  T  G+   +++ +++ +
Sbjct: 383 EKGLVKENEESYV-LTTDGVFWGNNLSSDVII 413


>gi|310778054|ref|YP_003966387.1| Coproporphyrinogen dehydrogenase [Ilyobacter polytropus DSM 2926]
 gi|309747377|gb|ADO82039.1| Coproporphyrinogen dehydrogenase [Ilyobacter polytropus DSM 2926]
          Length = 464

 Score =  173 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/326 (22%), Positives = 148/326 (45%), Gaps = 20/326 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQW 61
           +   +  M       + +Y+  PFC  KC YC F S+     VG+    F+ + + E++ 
Sbjct: 129 IEVVKKEMEYLNREYINMYIGIPFCPTKCRYCSFASYEINSGVGRHYNAFVDTLIEEIKL 188

Query: 62  MRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
             +        + S++ GGGTPS++   +I  +L  +  N  +SS  E T EA    ++ 
Sbjct: 189 TGEHLKENGYKLGSVYIGGGTPSILTETDIERVLASVKNNVDLSSVKEFTFEAGRVDTLT 248

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
               +  +  GV+RISL  Q+  E++L+ L R  +  +      L++N+   ++ DLI  
Sbjct: 249 KKKLEIMKNYGVDRISLNPQTFNEETLKNLNRTFSRDKFDEMYSLSKNMGFIINMDLIIG 308

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP +   +    ++    Y +++L+++ L ++K ++ +K     +  +  + V   +  L
Sbjct: 309 LPGEGTKEILNTMKELEKYQMENLTVHVLALKKASVLFKE-GHQEEKIDRQAVENGIEEL 367

Query: 239 TQSI-TSAHGLHAYEIS-------NHSFLGAESLHNLNYW-RYGDYIGIGPGAHSR---- 285
           T+      + ++  + S        ++  G ES+ N+         IG+G GA ++    
Sbjct: 368 TKKKSLKPYYMYRLKNSTQWGENLGYAIEGKESIFNIEMIEENQSTIGLGGGAITKKISA 427

Query: 286 -VKVGSHRVAISIEKHPESWLKMVRK 310
              V  H   +   K P ++++ +R+
Sbjct: 428 ESPVRDHIDRLVGPKEPATYVREMRE 453


>gi|257459170|ref|ZP_05624289.1| coproporphyrinogen III oxidase [Campylobacter gracilis RM3268]
 gi|257443555|gb|EEV18679.1| coproporphyrinogen III oxidase [Campylobacter gracilis RM3268]
          Length = 450

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 154/374 (41%), Gaps = 26/374 (6%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                 +Y+H PFC   CPYC F+ +    +   + +  +  TEMQ  +         ++
Sbjct: 43  PDKKYMLYMHVPFCHTFCPYCSFHKYAY-ERGACKAYFSALRTEMQRTKD--AGYDFETL 99

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGG  +LI+   +A  L+     +++    E++ E++P+ +E  +   +R   ++R+S
Sbjct: 100 YVGGG-TTLIDEDELARTLELAKSLFSIK---EVSCESDPNHIEPESLLRFRGL-IDRLS 154

Query: 135 LGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           +GVQS ++  LR   R     +       +  A  I P +S DLI+  P QT      ++
Sbjct: 155 VGVQSFDDDILRKASRYEKFGSGEILQEKLSRAVGILPILSLDLIFNFPFQTREILLRDI 214

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + A +   + ++LY L     +   +      L + + +   + Y++     S+      
Sbjct: 215 EAAKAVKPEQITLYPLM---KSPLMRDQIARSLGVSNVDHEEEFYSIICKEFSSWHRSN- 270

Query: 252 EISNHSFLGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
                +F   +S  N  Y     +Y+GIG GA S +       A     + E +   VRK
Sbjct: 271 ---AWAFAREKSNINDEYVGTNHEYVGIGSGAFSFLDGRLLVNAF----NLEDYASRVRK 323

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERN--LQRQGFI 368
           N   V+     S  ++A  +L +       I +  +      NL  E  R   L R    
Sbjct: 324 NESTVIATCDFSRSERAK-YLFLTELFNGEIDITKFNAANDLNLRRELGRELSLLRLAGA 382

Query: 369 ERVQFSRLRCTQRG 382
             ++   +R T+ G
Sbjct: 383 VWIEGEIIRTTEFG 396


>gi|317489273|ref|ZP_07947790.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325832303|ref|ZP_08165302.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|316911674|gb|EFV33266.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325486139|gb|EGC88593.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 438

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 149/390 (38%), Gaps = 32/390 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN      +     +  +   EM  ++ L       S++ GGGT
Sbjct: 40  LYMHVPFCERLCPYCSFNRFPF-AEDRARPYFANMRKEMLMLKDL--GYDFESLYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    +   +D   + +++    E++ E NP+ +  +      +  V R+S+GVQS 
Sbjct: 97  PTIM-IDELCDTIDLARETFSIG---EVSSETNPNHLIPSYLDKL-QGRVQRLSVGVQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   L+ + R     +  E +  I  A   F  ++ D+I+  P QT      +++R +  
Sbjct: 152 DNDLLKQMDRYDKYGSGEEILERIGEASPYFTSLNVDMIFNFPAQTEDVLFSDIERVVES 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNH 256
                + Y L                +           Y +   + +      +E  S  
Sbjct: 212 GTSQTTFYPLMASPS---VARSLARTVGKVDYAREQRFYEIISEVLAGGENPLFEHGSAW 268

Query: 257 SF-------LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +F        G +++ +     Y +Y  IG G  + +    +    S+      +   + 
Sbjct: 269 TFNKRGTGAAGEDAMIDEYVVDYEEYPAIGSGGITYLGNNLYVNTFSVN----DYNDAIE 324

Query: 310 KNGHAVVEKEFLSSEQQAD-EFLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQ 365
            +  +++ K   S   Q    F+M    LR  +  + ++   G +++         ++  
Sbjct: 325 HDRMSLMGKATFSKHDQMRYRFMMQLFGLR--LDKRQFKKDFGVSVERGLPVEMAFMKAS 382

Query: 366 GFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G  +R     L  T +G  ++  ++    +
Sbjct: 383 GAFDRDNADELTLTPKGRYLMVVMMRQFFI 412


>gi|301512719|ref|ZP_07237956.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB058]
          Length = 405

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/390 (18%), Positives = 152/390 (38%), Gaps = 36/390 (9%)

Query: 23  VHWPFC----VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +  P+C       C +C F +   + K   + ++     E    ++      + S++ GG
Sbjct: 1   LGIPYCIPTDPPHCGFCLFPTQDYKGKREMDFYLDFLSREAHLYKEFYQGAKLESLYVGG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWT---VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           GTP+L++P +   +   ++  +    +SS +E+T+E  P     +  +  + AG NR+S+
Sbjct: 61  GTPNLLQPNDYMKLTKVVSSLFPDAGISSPIEMTLEGIPQLFNEDKIRAIKDAGFNRVSM 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ + ++ +   GR     +   AI L        + DLIY  P QT+     +L+  +
Sbjct: 121 GVQQVNDELIATSGRKQTRKQVFDAIELFHKYSLSCNVDLIYGWPNQTVEAMLRDLESIV 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              + H++ Y+L I   + F    K      PS    +++YN+ +    + G     + +
Sbjct: 181 QSGIKHITHYELNIAGRSDFATKQKQ---NTPSIEKKIEMYNIAKQFLISKGYKQKTVYD 237

Query: 256 HSFLGAESLHNLNYWRYGDYI----------------GIGPGAHSRVKVGSHRVAIS--- 296
                   L +  Y  Y D +                G+G  A +     +     S   
Sbjct: 238 WEKEDNNQLISEKY-LYEDNLRDCLDANGQSKMTTMSGLGYAAVNMRLQPNSSSIKSVSA 296

Query: 297 -IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
              ++   +   +  N   V       +E     ++   L+  + I+ K +E +   ++ 
Sbjct: 297 MNHRNLTEYYNAISLNKLPVERMFVHDTEDVKLIWIFQALQEMK-INTKKYEKIFNSDIK 355

Query: 356 IECE---RNLQRQGFIERVQFSRLRCTQRG 382
           ++ +     L  +G++E      ++    G
Sbjct: 356 LDYKPIWDALVEEGWVEHND-EYIKLINEG 384


>gi|167625322|ref|YP_001675616.1| coproporphyrinogen III oxidase [Shewanella halifaxensis HAW-EB4]
 gi|167355344|gb|ABZ77957.1| Coproporphyrinogen dehydrogenase [Shewanella halifaxensis HAW-EB4]
          Length = 470

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 114/291 (39%), Gaps = 13/291 (4%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFG 77
            +Y+H PFC K+C +C+F  +    +     +I++   +++      L   R  ++++ G
Sbjct: 57  ALYIHIPFCRKRCTFCNFFENGTNPE-RISRYIKNLTEQLKIAADTPLAQSRPFNTVYVG 115

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ I    +  + + I + + +  + E+T+E   +  + + +        NR S GV
Sbjct: 116 GGTPTDISSDEVKQLGEAI-QRFPLIDDAEVTLEGRLNGFDDDKWHNATANSFNRFSFGV 174

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q  +  GR  +    +  +          +  DLI+ LP QTM  W+ +LQ  + 
Sbjct: 175 QSFDTQVRQAAGRFDDKDFLLNRLQQLSQHPSGSIVIDLIFGLPGQTMDIWQQDLQAVID 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL-------VLPSENVAVDLYNLTQSITSAHGLH 249
             V  + LYQL    GT      + G +             +  ++Y    +        
Sbjct: 235 SGVHGVDLYQLIGLSGTRIENAREKGKVLGTAASEFQADSQMRANMYASGANYFETQNWQ 294

Query: 250 AYEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                +        S++N       + +  G GA   +          ++K
Sbjct: 295 RLSSCHWRCAPRERSVYNSLAKSGIEILPFGAGAGGSIHGHGCMNGRDLKK 345


>gi|257459001|ref|ZP_05624120.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           gracilis RM3268]
 gi|257443386|gb|EEV18510.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           gracilis RM3268]
          Length = 405

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 78/385 (20%), Positives = 154/385 (40%), Gaps = 38/385 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLT--GPRSISSIFF 76
           +Y+H PFC   C +C     + R K+G E   + +  + +++   ++     + I SI+F
Sbjct: 40  IYLHVPFCDNICSFCS----MMRSKLGDELDEYAKFLIRQIKDYGEMPYFDTKKIKSIYF 95

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTPS+    +   +L  + KN+ ++ + EI++E    ++++      +  GVNR S+G
Sbjct: 96  GGGTPSVFSETHFEKVLGALHKNFKIADDCEISVETTLHNLDLQKALSLQSFGVNRFSIG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+   Q    L R H  + AI  +   R  F   +  D+IY  P +++ +   + +   
Sbjct: 156 VQTFSRQGRALLNRVHKPARAIERLKDLREKFDGMLCCDIIYNFPNESVEEALEDARYVD 215

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +D  S Y L   +G+  YK        L   +  +        +  +      E++ 
Sbjct: 216 ELGLDSASFYSLMFFEGSELYKKIDKSYYDL-EIDKKLHHAFAGALLIGSDNFEVLELTK 274

Query: 256 HSFLGAESLHNLNYW----RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
            +  G +   N  Y     +  D + IG GA   V  G     +S  K      +   K 
Sbjct: 275 LARKGRD---NYGYIKLSHKGTDILPIGNGAGGHV-AGFGIYGVSGHKMISRIDEREAKY 330

Query: 312 GHA--VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           G    + +   +S  +           L+E +S   ++        ++  +  +  G +E
Sbjct: 331 GVLSNLFQYPIVSLNE-----------LKEALSASIYDE------ALQKLKEFESWGLLE 373

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLA 394
                 +     G+   +++   +A
Sbjct: 374 LKDEKSV-LNLDGIFWGNNINEEIA 397


>gi|223040087|ref|ZP_03610368.1| radical SAM domain protein [Campylobacter rectus RM3267]
 gi|222878673|gb|EEF13773.1| radical SAM domain protein [Campylobacter rectus RM3267]
          Length = 451

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 161/380 (42%), Gaps = 28/380 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+ +    ++ +  + ++   EM+ ++      + +S++ GGG 
Sbjct: 48  LYAHVPFCHTFCPYCSFHKYHYEQEIAK-IYFENLRQEMRQVKD--AGFNFTSLYVGGG- 103

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI    +   L    + + +     ++ E++P+ +E  N + ++   ++R+S+GVQS 
Sbjct: 104 TTLINEPELEKTLILAKELFDIKD---VSCESDPNHIEPENLKRFQGL-IDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            ++ L+ + R+    ++      +  A  I P +S DLI+ LP QT  Q   +++ A S 
Sbjct: 160 SDEILKKVARHEKFGSSEVLQEKLKKAMGILPTLSLDLIFNLPNQTKEQLLNDVKIAKSI 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           A + ++ Y L     T   +      L +   +   + Y L            Y  SN  
Sbjct: 220 APEQITFYPLMKSPLT---RDAIAKSLGVADSDNEREFYELICE-----NFSDYHQSNAW 271

Query: 258 FLGAE--SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
             G +  +L +     + +Y+G+G GA S +       A ++      + + V+     V
Sbjct: 272 AFGRDNANLRDEYVGSHHEYLGVGSGAFSFLNGELVINAFNLL----DYGRRVKNGESPV 327

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV--QF 373
           + K   + +++   ++ +      G+++  +      ++  E    L     +  +    
Sbjct: 328 IAKCGFTKKERLK-YIFLTELFDGGVNIAQYNEFNRADIKKELFVELNLLKLVSAIYEDG 386

Query: 374 SRLRCTQRGMTMLDSVIANL 393
            R+  T  G  +   ++ + 
Sbjct: 387 GRIIPTGFGRYLCLVLMRDF 406


>gi|332288682|ref|YP_004419534.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
 gi|330431578|gb|AEC16637.1| coproporphyrinogen III oxidase [Gallibacterium anatis UMN179]
          Length = 463

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 79/390 (20%), Positives = 148/390 (37%), Gaps = 37/390 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSI 74
           NS  +Y H PFC   C +C F     +     + ++ + + E++   ++       + SI
Sbjct: 46  NSRALYFHIPFCETICSFCPFTRGAYKDHDIVDKYVNALIKEIEIKSKINDYFSIPVKSI 105

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           FFGGGTPSL+ P N+  I + I K + +S + E + E    S+  +     ++ GV    
Sbjct: 106 FFGGGTPSLLSPDNMIKIGEAIKKYFLLSKDCEFSFEIEIKSLSFDKVAAMKEMGVTHPR 165

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
            G+Q+ +    +         +   A  L    F  + FD++Y +  Q   +   +L++A
Sbjct: 166 FGLQTFDSNWRKLFNLTSTYEQINFAADLLNKNFKTVLFDILYGMNGQDEEELIRDLEKA 225

Query: 195 LSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-----AHGL 248
           ++    ++ +Y +  +      +K  +D  L L +      +  L  S         H  
Sbjct: 226 IALGTSNIDIYPIDNVMTQAKLHKAIRDRGLPLTTATRKFSMNMLIDSYMRSKGFMPHNG 285

Query: 249 HAY----EIS------NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIE 298
           H Y    E+        +SF+  E  H   Y  + D  G+G  A S ++  +     S +
Sbjct: 286 HGYVRVDEVDQSVVTNKYSFIYHE--HVYGYSDH-DLHGVGVNAVSSIREHTITNTSSRQ 342

Query: 299 KHPESWLK-----MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
            +  S +       + K+   + E + L          +M L     +     +M+    
Sbjct: 343 NYINSMMNGKIPMTINKHSKILDEMKAL----------IMRLPYHGEVEKSKIDMINIPL 392

Query: 354 LDIECERNLQRQGFIERVQFSRLRCTQRGM 383
              E    L+    I      R   T+ G 
Sbjct: 393 SLQEKISQLKSHKLITE-DKERFYLTKLGW 421


>gi|323155162|gb|EFZ41349.1| oxygen-independent coproporphyrinogen III oxidase domain protein
           [Escherichia coli EPECa14]
          Length = 200

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 81/162 (50%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E+     
Sbjct: 39  QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAP 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R +S + +GGGTP+ +    I+ ++  + +N+  +++ EI+IE +P  +E++    
Sbjct: 99  LFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDH 158

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
            R  G NR+S+GVQ   ++  R + R  +     A ++ AR 
Sbjct: 159 LRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHARE 200


>gi|269124145|ref|YP_003306722.1| Coproporphyrinogen dehydrogenase [Streptobacillus moniliformis DSM
           12112]
 gi|268315471|gb|ACZ01845.1| Coproporphyrinogen dehydrogenase [Streptobacillus moniliformis DSM
           12112]
          Length = 457

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 16/318 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQW 61
           L   +N++      ++G+Y+   FC  KC YC F +++++  Y+   + +  + L E++ 
Sbjct: 124 LEVVKNSIDFLDDKTIGIYIGLAFCPTKCTYCSFPAYLKKGKYEKRYDEYFLTLLREIKE 183

Query: 62  MRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           +  L       ++SI+ GGGTPS +    + ++L  I +N       E T EA    +++
Sbjct: 184 IGNLCSELNLEVNSIYVGGGTPSYLTHDELEILLKTINENIETKFLKEYTFEAGRIDTID 243

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
                  +   V RIS+  QS ++ +L+ + R HN  +       A+ +   ++ D I  
Sbjct: 244 NLKLSMLKIYNVTRISINPQSFKDSTLKLVNRYHNLDKLNEVYTEAKKLSLDINMDFIIG 303

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP ++       L++   Y  ++++ + L ++K +   K     + +L  E +   +  +
Sbjct: 304 LPLESTEDVLNTLEQFRKYNPENVTFHYLAMKKASTLTKNKYFKEDLLNHELITKKISEI 363

Query: 239 TQSITSAHGLHAY---------EISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKV 288
                     + Y         E   +   G + ++N+     Y   I IG GA +++  
Sbjct: 364 MNEK-GYIPYYMYRQKSSSISGENIGYCKSGKQLIYNIEMIEEYKSIISIGAGAITKLIK 422

Query: 289 GSHRVAISIEKHPESWLK 306
                 +   K P  WL 
Sbjct: 423 DDLIKRLINPKDPLMWLD 440


>gi|262163675|ref|ZP_06031416.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           VM223]
 gi|262027891|gb|EEY46555.1| coproporphyrinogen III oxidase oxygen-independent [Vibrio mimicus
           VM223]
          Length = 331

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 118/317 (37%), Gaps = 25/317 (7%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           +  +   +  + + EI+IE +P  +++      R+ G NR+S+GVQ   ++  + + R  
Sbjct: 1   MTLLRSEFDFADDAEISIEIDPREIQLEVLDHLRQEGFNRVSIGVQDFNKEVQKLVNREQ 60

Query: 153 NASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           +     A +  A+   F   + DLIY LPKQT   +   LQ+ L+     LS++      
Sbjct: 61  DEQFIFALVERAKQLGFRSTNLDLIYGLPKQTAETFAQTLQQVLTMQPGRLSVFNYAHMP 120

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE-------SL 264
             LF    K  D  LP+    + +   T +  +  G     + + +    E        +
Sbjct: 121 Q-LFAAQRKIKDADLPAAEEKLAILQQTIATLTGAGYQFIGMDHFALPDDELAVAQRNGI 179

Query: 265 HNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            + N+  Y      D +G G  A S V     +     +K  + +   V +  HA+ +  
Sbjct: 180 LHRNFQGYTTQGECDLVGFGVSAISMVGDAYAQN----QKELKKYYAQVNEMRHALWKGV 235

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL------DIECERNLQRQGFIERVQF 373
            L  +      ++  L     +   + E             D+   +       +  V  
Sbjct: 236 ALDKDDLLRREVIKQLICNFKLDKTEIEREFNLRFNHYFRQDLALLQTFIDDELVT-VDE 294

Query: 374 SRLRCTQRGMTMLDSVI 390
             +  T RG  ++ ++ 
Sbjct: 295 KMIEVTLRGRLLIRNIC 311


>gi|291534059|emb|CBL07172.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Megamonas hypermegale ART12/1]
          Length = 271

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 4/209 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRS 70
           G  S    VY+H PFC + C YC F  +    +  +  ++   + ++   ++        
Sbjct: 64  GDKSKKKAVYIHIPFCSQICLYCGFFQN-YSNEERETMYVDRLIKQLLMAKEYKYVQDSV 122

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           I+++FFGGGTPS + P N   +L  + +   ++++ EIT+EA    +     Q + K GV
Sbjct: 123 INAVFFGGGTPSTLSPYNADRLLKTMNEVLPLANDCEITMEARVHDLVDEKLQVWFKHGV 182

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEM 189
           NRIS+GVQS +    + +GR  +    I  +  A +    +   DLIY LP Q +  +  
Sbjct: 183 NRISVGVQSFDTAIRQSMGRKDDKETVIENLKRAASYNQAVLIIDLIYGLPAQDVDNFVN 242

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +L+ A S  +D + LYQL + + +   K 
Sbjct: 243 DLKIADSLPIDGMDLYQLNVFEQSALKKR 271


>gi|157164693|ref|YP_001466100.1| coproporphyrinogen III oxidase [Campylobacter concisus 13826]
 gi|112800526|gb|EAT97870.1| coproporphyrinogen III oxidase [Campylobacter concisus 13826]
          Length = 454

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 163/377 (43%), Gaps = 29/377 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T +      +Y H PFC   CPYC F+ +    ++ +  + ++   EM+ +++       
Sbjct: 39  TPKKDKKYMLYAHVPFCHTFCPYCSFHKYHYEQELAK-IYFENLREEMRQIKE--AGFDF 95

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           SS++ GGG  +LI    +   L      +++     I+ E++P+ +   +   +    +N
Sbjct: 96  SSLYVGGG-TTLINEPELEKTLKLAKDLFSIED---ISAESDPNHISPESLSRF-DGLIN 150

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S+GVQS ++++L+ +GR     +A E    +  A    P +S DLI+ LP QT  Q  
Sbjct: 151 RLSVGVQSFDDETLKRVGRYEKFGSAEETKRKLEQAIGKIPVISLDLIFNLPNQTKEQLI 210

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            ++  A S +   ++ Y L   + T   + +    L + + +   + Y +     +  G 
Sbjct: 211 NDINTAKSISPQQITFYPLMKSELT---RENIARALGVSNVDNEREFYEIIVREFAKGGY 267

Query: 249 HAYEISN-HSFLGAESLHNLNYWRYG--DYIGIGPGAHSRVKVGSHRVAISIEKHPESWL 305
                SN  +F   +S    + +     +Y+G+G GA S +       A ++      + 
Sbjct: 268 RQ---SNAWAFSNEKSAELRDEYVGSNLEYVGVGSGAFSFLNGELVINAFNLL----DYG 320

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECERNLQR 364
           + V++    V+ K   S +++     +   RL +G + +K +      N++ +    L  
Sbjct: 321 RKVKERQSPVIAKCAFSKKERLKYTFLT--RLFDGAVDIKSYNEQNNANINKDLFVELSL 378

Query: 365 QGFIERV--QFSRLRCT 379
              +  +  +   ++ T
Sbjct: 379 LKLVNAIYEENGVIKPT 395


>gi|257791458|ref|YP_003182064.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
 gi|257475355|gb|ACV55675.1| Coproporphyrinogen dehydrogenase [Eggerthella lenta DSM 2243]
          Length = 441

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 141/380 (37%), Gaps = 31/380 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN +  R +V +  +  +   EM  ++ L       SI+ GGGT
Sbjct: 40  LYMHVPFCERLCPYCSFNRYPFREEVAR-PYFANMRKEMLMLKDL--GYDFESIYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    +   LD    N+ +    E+  E NP+ +         +  V R+S+GVQS 
Sbjct: 97  PTVM-IDELCETLDMARDNFNI---REVASETNPNHLTQPWLDKL-QGRVQRLSVGVQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ + R     +    +  I  A   F  ++ D+I+  P QT      +L++    
Sbjct: 152 DDDLLKQMDRYEKYGSGDVILERIAEAEPYFDSLNVDMIFNFPSQTEDVLMADLEKIALS 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS--------AHGLH 249
                +   L +   T          L     +     Y +   + +           L 
Sbjct: 212 GCRQTTFSPLYVSSATT---RKMAATLGAMDYDREYRYYQILDGVLAGGDDPLFDRTTLW 268

Query: 250 AYEISNHSFLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
            +   + +   A++     Y   Y +Y  IG G+ + +    +    SI    + +   +
Sbjct: 269 TFTRPDKAGKPADAPQIDEYQVNYDEYPAIGSGSITHLNGCLYVNNFSI----KDYNAAI 324

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF- 367
                +++ K  +S         ++ L  +  +  + +E   G +++      L      
Sbjct: 325 ESGRMSIMGKTEMSKRDLMRYRFLLDL-YKLRLDKRAFERDFGCSIETGLPMELAFMRLN 383

Query: 368 --IERVQFSRLRCTQRGMTM 385
              E      L  T  G  +
Sbjct: 384 RAFETDNAEELTLTPIGRYL 403


>gi|149922584|ref|ZP_01911013.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
 gi|149816540|gb|EDM76036.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Plesiocystis pacifica SIR-1]
          Length = 480

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 101/405 (24%), Positives = 161/405 (39%), Gaps = 39/405 (9%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSI 74
           +  L +Y H PFC  KC YC+F    R        ++   + E++ +  +L    SI  I
Sbjct: 65  AEPLLLYCHVPFCATKCHYCNFAVDTRSRPSLHGRYVDGLVRELERLDARLPASTSIGGI 124

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI-----TIEANPSSV--EVNNFQGYRK 127
             GGGTP+L+E   +  +L  +A     + +        +IE  P+    E +       
Sbjct: 125 DIGGGTPTLLEVDALDRLLAALAPFADRARDSPFAFGPVSIETTPAIAAREPDKLARLAN 184

Query: 128 AGVNRISLGVQSLEEQSLRFLGR-NHNAS-----EAIAAIHLARNIFPRMSFDLIYALPK 181
            GV RIS+GVQS +  +L  L R  H ++     +A A  +L    F R++ DLI+ LP 
Sbjct: 185 GGVARISMGVQSTDAATLEALNRGRHGSAAGTDLQARALANLRGAGFERVNVDLIFGLPD 244

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIE-KGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           Q++ QW  +L   L+ A D ++ Y      KG +  + H       P+      LY+L  
Sbjct: 245 QSLDQWRRDLDTVLAAAPDSITTYDCLYRGKGRVLTRKHDASGRPRPTPERYAALYDLAF 304

Query: 241 SITSAHGL-HAYEISNHSFLGAESLHNLNYWRYG--D---YIGIGPGAHSRVKVGSHRVA 294
               A G    Y   N S    E+     Y+     D   Y+G+G  A S+         
Sbjct: 305 ERLRAAGYVAPYGSVNFSRRPGET-GTSAYFEGRLLDGHAYLGVGNYASSQAGA-----R 358

Query: 295 ISIEKH-PESWLKMVRKNGH-AVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAG 351
                +  + WL+ V    H    +   L + ++A + L+  L L  G +         G
Sbjct: 359 WWFAPYKVDRWLEAVESGVHLPAGDLYRLPAGERAAKQLL--LALSFGVVDGARLRRAHG 416

Query: 352 RNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
             LD  C   L+    +G++      R      G      V+  L
Sbjct: 417 IELDAVCGPALEFALSRGYLVPDGDERWTLAP-GRF---DVLPRL 457


>gi|223039321|ref|ZP_03609610.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           rectus RM3267]
 gi|222879382|gb|EEF14474.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           rectus RM3267]
          Length = 407

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 158/379 (41%), Gaps = 30/379 (7%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGG 78
           +Y+H PFC   C +C    +  + +   +++ +  L E++     Q    ++I S++FGG
Sbjct: 42  IYIHVPFCDNICSFCS--MYRTKLEDELDDYTKYLLGEIEKYGKFQYLKAKNIRSVYFGG 99

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++++ +++  I++ I   + ++++ E ++E+   ++ ++  +     GVNR S+GVQ
Sbjct: 100 GTPTILKERHLEPIINAIRSKFNIAADCEFSLESTLHNLNLSKLRLLESLGVNRFSIGVQ 159

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++  + L R      AI  + + R  F   +  D+I+  P+QT+ +   + +     
Sbjct: 160 TFSDRGRKLLNRVQGKKGAIEHLQMIRQNFSGMVCTDIIFNYPEQTLEEVLEDARLVDEL 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           ++D  S Y L +   +   K        +  E+   + +   + +         E +  +
Sbjct: 220 SIDSTSFYSLQLFDKSELAKSISQDYYDVEHEHKLHNAF--VEKLLGTGNYEVLEYTKFN 277

Query: 258 FLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
            +G +      Y R      D + +G GA   +       A    +         R  G 
Sbjct: 278 RIGRD---RYQYIRLSHEGADILPLGKGAGGHLGCYGIYNAKENMQMISKTNDKQRAEGR 334

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
             ++  F   +       +   R++  +S   ++ L       E  +  + +G++  ++ 
Sbjct: 335 --LKSLFQYPK-------IELARVKSFVSDATFDELT------EFFKKCENKGYMS-IEN 378

Query: 374 SRLRCTQRGMTMLDSVIAN 392
             L  T  G+   +S+   
Sbjct: 379 GFLNYTTDGVFWGNSIATE 397


>gi|163748451|ref|ZP_02155705.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
 gi|161332029|gb|EDQ02706.1| coproporphyrinogen III oxidase [Shewanella benthica KT99]
          Length = 460

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/318 (20%), Positives = 116/318 (36%), Gaps = 19/318 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT--EMQWMRQLTGPRSISSIFFG 77
            +Y+H PFC K+C +C+F  +         +++        +          +  +++ G
Sbjct: 51  ALYIHLPFCRKRCSFCNFFEN-GSNPARISHYVDELSKQLYIASKTPFVQSGTFDTVYVG 109

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+ ++   I  I+    + + ++ + EIT+E   +      F     +G NR S GV
Sbjct: 110 GGTPTDMQASEI-AIIGEAIQAFPLAKDAEITLEGRINGFTHAKFNAALCSGFNRFSFGV 168

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS + Q     GR  +    I  +          +  DLI+ LP QTM  W+ +LQ  + 
Sbjct: 169 QSFDTQVRLAAGRFDDRETLIERLQELSEHPSATIVADLIFGLPGQTMEIWQQDLQDVIQ 228

Query: 197 YAVDHLSLYQLTIEKGTLF---------YKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             V  + LYQL   +GT            K  +              +Y    S+  +  
Sbjct: 229 SGVHGVDLYQLIGLQGTRLSQQAEKKATNKQKQQTLAPAVDSQTRASMYAAGASLLESSN 288

Query: 248 LHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
                  +      E S++N       + +  G GA   +       A    +    W +
Sbjct: 289 WQRLSSCHWRQDKRERSIYNSLAKSGIEILPFGAGAGGNIHGHGIMNA----RDLSHWHQ 344

Query: 307 MVRKNGHAVVEKEFLSSE 324
              +     +  + L S+
Sbjct: 345 AQSQATDTSIATDTLPSQ 362


>gi|317490604|ref|ZP_07949077.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325831382|ref|ZP_08164636.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|316910306|gb|EFV31942.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325486636|gb|EGC89084.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 441

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/380 (18%), Positives = 136/380 (35%), Gaps = 31/380 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CPYC FN +  R +V +  +  +   EM  ++ L       SI+ GGGT
Sbjct: 40  LYMHVPFCERLCPYCSFNRYPFREEVAR-PYFANMRKEMLMLKDL--GYDFESIYVGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    +   LD     + +    E+  E NP+ +         +  V R+S+GVQS 
Sbjct: 97  PTVM-IDELCETLDLARDEFNI---REVASETNPNHLTQPWLDKL-QGRVQRLSVGVQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ + R     +    +  I  A   F  ++ D+I+  P QT      +L++    
Sbjct: 152 DDDLLKQMDRYEKYGSGDVILERIAEAEPYFDSLNVDMIFNFPSQTEDVLMADLEKIALS 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG---LHAYEIS 254
                +   L +   T          L     +     Y +   + +           + 
Sbjct: 212 GCRQTTFSPLYVSSATT---RKMAATLGAMDYDREYRYYQILDGVLAGGDDPLFDRTTLW 268

Query: 255 NHSFLGAESL-----HNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             +    E           Y   Y +Y  IG G+ + +    +    SI    + +   +
Sbjct: 269 TFTRPDKEGKPADAPQIDEYQVNYDEYPAIGSGSITHLNGCLYVNNFSI----KDYNAAI 324

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGF- 367
                +++ K  +S         ++ L  +  +  + +E   G +++      L      
Sbjct: 325 ESGRMSIMGKTEMSKRDLMRYRFLLDL-YKLRLDKRAFERDFGCSIETGLPMELAFMRLS 383

Query: 368 --IERVQFSRLRCTQRGMTM 385
              E      L  T  G  +
Sbjct: 384 RAFETDNADELTLTPIGRYL 403


>gi|262038085|ref|ZP_06011490.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Leptotrichia
           goodfellowii F0264]
 gi|261747905|gb|EEY35339.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Leptotrichia
           goodfellowii F0264]
          Length = 414

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 14/278 (5%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFG 77
            +YVH P+C K C +C+ N   ++     E++    + E +   +      + + + FFG
Sbjct: 46  AMYVHIPYCDKICSFCNLNR--KQLDNDLEDYTDFLIKEFEKYGKTDYMKSKKLDAAFFG 103

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP+++    I  IL  I +N+  + + E T E+   ++     +  +K GVNR+S+G+
Sbjct: 104 GGTPTILREHQIEKILKCIKQNYNFTEDYEFTFESTLHNLNDKKLEILQKNGVNRLSIGI 163

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALS 196
           QS   +    L R +   E +  +   ++ F   +  D+IY  P++T+ +   +      
Sbjct: 164 QSFSPKGRDTLNRTYTKEETVKRLKKVKDNFDGLVCIDIIYNYPEETVEEATEDADIIAD 223

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT--QSITSAHGLHAYEIS 254
             +D  S Y L I  G+   K  K+  L L  +       +    + + S      YEI 
Sbjct: 224 LKLDSSSFYSLIIFDGSKMSKDIKENRLELDYKLETDRKLHDAFVKRLLSKGD---YEIL 280

Query: 255 NHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRVKV 288
            H+ +  ++     Y +      D + IG GA  ++  
Sbjct: 281 EHTKIVRKNRDKYKYIKLLNSQTDTLPIGVGAGGKLGN 318


>gi|256826500|ref|YP_003150459.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
 gi|256582643|gb|ACU93777.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase
           [Cryptobacterium curtum DSM 15641]
          Length = 443

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/389 (19%), Positives = 144/389 (37%), Gaps = 31/389 (7%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             +   +  +Y+H PFC   CPYC FN +  R ++    +  S   EM  ++ L      
Sbjct: 31  PAETGRTYMLYMHVPFCEVLCPYCSFNRYPFRPEIA-GPYFASMRKEMLMLKGL--GYDF 87

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            SI+ GGGTP+++    +   LD    N+ +    E+  E NP+ +     +   +  V 
Sbjct: 88  ESIYVGGGTPTVM-IDELCETLDVARDNFHIK---EVACETNPNHLTRPYLEKL-QHRVQ 142

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S+GVQS ++  L+ + R     +  E +  I  A      ++ D+I+  P QT     
Sbjct: 143 RLSVGVQSFDDTLLKQMDRYRKYGSGQEILERIEEAHGYIDSLNVDMIFNFPSQTEEGLF 202

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG- 247
            +L++        ++   L    GT+     K G L     +     Y++   + +    
Sbjct: 203 ADLEKIALCGARQVTFSPLYASNGTVAKMASKFGQL---DYDREERFYHIIDGVLAGGEQ 259

Query: 248 --LHAYEISNHSFLGA-----ESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                  +   +         +  H   Y   Y DY  IG G+ + +    +    SI  
Sbjct: 260 PLFDRTTLWTFTRTDKNGAINDPDHIDEYQTCYEDYPAIGSGSITHLNGALYVNTFSIS- 318

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI--E 357
               +   +     +++ K  LS         ++ L  +  +  + ++   G +++    
Sbjct: 319 ---DYNAAIEAGHMSIMGKTELSRRDLMRYRFLLDL-YKLRLDKRRFKADFGCSVEAGLP 374

Query: 358 CERNLQR-QGFIERVQFSRLRCTQRGMTM 385
            E    R  G         L  T  G  +
Sbjct: 375 MEMAFMRLMGAFATDTSDELTLTPTGRYL 403


>gi|258645175|ref|ZP_05732644.1| coproporphyrinogen oxidase PhuW [Dialister invisus DSM 15470]
 gi|260402524|gb|EEW96071.1| coproporphyrinogen oxidase PhuW [Dialister invisus DSM 15470]
          Length = 464

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 87/394 (22%), Positives = 160/394 (40%), Gaps = 23/394 (5%)

Query: 1   MKYLSAYENNM-TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +K L A +  +  G  +    VY+H PFC   C YC F       K   E +++  L E+
Sbjct: 46  LKVLGAMKEVLFNGTPTQRAAVYIHIPFCRLSCTYCSFFKKKGDNKAQHE-YVELLLKEL 104

Query: 60  QWM--RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           + +  +       IS++FFGGG P ++   ++A IL  I K + ++ + E+T+E++ S +
Sbjct: 105 ESLSDKPYVKKSKISAVFFGGGAPGILSAGDMADILCAIKKTFLLAEDAEVTMESSLSDM 164

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
                      GV R S G+QS   Q    +GR ++  E +  + +       +  DLIY
Sbjct: 165 TEEKMDVAIAGGVTRFSFGIQSFNSQVRNTVGRPYSREEVLKQLSIYSKKKADIIIDLIY 224

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP +T      +++ A +  +  L LY+L +   +   K        L    V V  + 
Sbjct: 225 GLPYETEETMRQDIRDAAACGIAGLDLYKLQLLPDSPLGKSFAAAGKCLIESEVQV-FFQ 283

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAIS 296
           + +   +A G      S+     +E +L+N       D   IG     R+   S      
Sbjct: 284 VAEEELNAIGAENISCSHWRMKQSERNLYNTIASGSDDLFAIGMACGGRIGGVSF----- 338

Query: 297 IEKHPES-WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL---REGISVKDWEMLAGR 352
           ++  P++ +  +V+   +  +  E    ++         L+    R  I +   E + G 
Sbjct: 339 MKPIPDAMYHSVVKMGMYCPMAAE----KEGKYHAFFSALQSAGNRGIIDLSALEEMFGL 394

Query: 353 N---LDIECERNLQRQGFIERVQFSRLRCTQRGM 383
               L +   +  +  G +E ++    R T  G 
Sbjct: 395 PVAKLLMPLFQTWEVWGLLELIENQ-WRMTSPGR 427


>gi|288920274|ref|ZP_06414587.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
 gi|288348298|gb|EFC82562.1| Coproporphyrinogen dehydrogenase [Frankia sp. EUN1f]
          Length = 357

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 15/308 (4%)

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
           + + + V+ + E T+E N    +    +   ++ +NR+SLGVQS + + L  +G  H A 
Sbjct: 1   MHELFEVADDAEFTLEGNARDFDDEKIEYVAQSRINRLSLGVQSFQPEILGVIGSPHAAE 60

Query: 156 EAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           ++   I   +   F  +  DL+Y +P  T+  W+ +L+   +  V H ++Y   I + T+
Sbjct: 61  DSARVIREFQARGFRNIQLDLMYNMPGHTLDIWKRDLETLATLDVPHFTIYLYRIHRDTI 120

Query: 215 FYKMHKDGDLVLPSENVAVD---LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR 271
             K+   G L  P +        +Y     I    G   Y + +    G E+++N   W+
Sbjct: 121 QDKLISRGRLSAPKDPEGPMVKAMYREAVEIAKQMGYTMYMVDHFCKPGYENMYNHWNWK 180

Query: 272 -YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE-KEFLSSEQQADE 329
            Y D + +GPG++S          +  E   E ++  V      +    + LS   + + 
Sbjct: 181 VYIDTLAVGPGSYSYFDG----YRLGTETDVEKYIDAVEGGDLLISTITDKLSPRVERER 236

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTML 386
           +++  L   E I    +    G +   +       L+R+G +E     R+R TQ G+   
Sbjct: 237 YVVFALLYYE-IEYSFYRDKFGTSFLEDFADELARLERKGLVELTD-DRMRLTQLGLIWH 294

Query: 387 DSVIANLA 394
            +VI    
Sbjct: 295 TNVILEFF 302


>gi|57242724|ref|ZP_00370661.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
 gi|57016653|gb|EAL53437.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter upsaliensis RM3195]
          Length = 444

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/399 (18%), Positives = 167/399 (41%), Gaps = 40/399 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
               S  +Y H PFC   CPYC F+ +     + + N+ QS   E+Q ++      + ++
Sbjct: 37  AKEKSYMLYAHIPFCHTFCPYCSFHKYYYDENLAK-NYFQSLRKELQIIKD--KGFNFNA 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++      ++   ++R+
Sbjct: 94  MYVGGG-TTLINEEELLRTLELCKKLFDIK---EISCESDPNHIDPKKLTMFKGL-IDRL 148

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R H   ++      I  A  I P  S DLI+ LP Q+  Q   +
Sbjct: 149 SCGIQSFDDETLKKVARYHKFGSSEVLQEKIAKALGILPIFSIDLIFNLPTQSKEQLLND 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  A   +   ++ Y L     +   K +    L +  ++   + Y +       +    
Sbjct: 209 LNIAKKLSPQQITTYPLM---KSNLTKDNIAKSLGVSFKDNEFEFYQIICEFFKDYT--- 262

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +  ++  +++
Sbjct: 263 -QNNAWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNTYTTLIK 317

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           +  +A + K   + +++   ++ +       + +  +      NL+ E    L+      
Sbjct: 318 EKQNANIAKAHFNPKERLK-YVFLTEIFSGSLELTHFNRTLKCNLEKELFIELKALKMCG 376

Query: 370 RV--QFSRLRCTQ--------------RGMTMLDSVIAN 392
            +  +   L+ +                GM ++ +V  +
Sbjct: 377 AIKKEGDILKASAFGKYLFVVLMKDFYAGMDLVRAVFRD 415


>gi|39935191|ref|NP_947467.1| coproporphyrinogen III oxidase [Rhodopseudomonas palustris CGA009]
 gi|39649042|emb|CAE27563.1| putative oxygen independent coproporphyrinogen III oxidase
           [Rhodopseudomonas palustris CGA009]
          Length = 486

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 11/333 (3%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGG 79
           Y+H P+C   C +C F  +V R ++G   ++   + E        L     I +I+ GGG
Sbjct: 98  YLHVPYCQNHCLFCGFFENVWRPEIG-PAYVDDLIAEFAAKSHTPLIASAPIDAIYIGGG 156

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPS ++  ++A ++  + +   +S++ EIT+E      ++   +    AGVNR+S+GVQS
Sbjct: 157 TPSALDADDLARLIAALHRYLPLSADCEITLEGRSYGFDIAKAKKLADAGVNRLSIGVQS 216

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYA 198
              +  R LGR     E  A +     +    +  DLIY LP Q+   W  ++       
Sbjct: 217 FSTEVRRRLGRKRGGEEVAAFLAELMALGRTSVVCDLIYGLPGQSDADWRRDIDTVSRIG 276

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHAYEISNHS 257
           +D ++LY L +  G    +  ++G L  P+   A   LY       +  G      S+  
Sbjct: 277 LDGVTLYALNMFPGGPMARAVENGKLPQPATPAAQARLYAEGVERLTESGWLQVSQSHLV 336

Query: 258 F-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
             L   + +N +  R    +  G GA  +      R  I I +  E    MV +N  A +
Sbjct: 337 RSLRERNRYNASIKRGVACLPFGAGAGGQAHGHRWRNVIDIARRRE----MVAQN-LAPI 391

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
           E   L     A   ++        + +   E L
Sbjct: 392 EGLALVPSDHAAHAMIAAGLETGRLDLAAVEAL 424


>gi|167840710|ref|ZP_02467394.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           MSMB43]
          Length = 490

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/413 (18%), Positives = 152/413 (36%), Gaps = 34/413 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTG- 67
            GQG     +Y H+P C   C +C++              + +  + + E     +    
Sbjct: 60  PGQG-KPAHLYYHFPLCEYICHFCNYVKQLASPTSRGAQLDRWTDALIKESTLYARQVPW 118

Query: 68  --PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQG 124
                I S + GGGT +++ P ++  ILD +   + V+   E+ IE NP +  +++  + 
Sbjct: 119 VTGALIESFYIGGGTAAVLTPAHLKRILDHVRSTFHVTPECELNIEGNPDNFCDIDKVRA 178

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
               G NR S+GVQS   +  +F  R H    +  AI   R+     + D+++ LP QT 
Sbjct: 179 LGDIGFNRFSVGVQSFTPEVNQFTNRGHTPDMSRQAILNLRSTGFPFNVDMMFGLPHQTP 238

Query: 185 TQWEMELQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVD--------L 235
                +L+  +   V  +++Y+L   ++ ++        ++      +            
Sbjct: 239 ETVSEDLRTLVELEVPTITIYRLRNADRQSMGIGNRAVWNVPKVRNRLVEQGLFPTLGAT 298

Query: 236 YNLTQSITSAHGLHAYEISN---HSFLGAESLHNL-----NYW-RYGDYIGIGPGAHSRV 286
           Y + +        + Y+ S     S  G     N+     N W R+   +  GPGA+  +
Sbjct: 299 YEMRERAVEHLVRNGYQPSPCGWWSLPGTYREGNIPRVSRNKWQRFDTMLAFGPGAYGWL 358

Query: 287 KVGSHRVAIS-IEKHPESWLKMVR-KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
              +  V  +        +L  +   +   +     L+  Q     L    + R+ I + 
Sbjct: 359 AGANRSVIQTHNSSDISGYLHHMESSDTPPLAFGRLLTGNQAVGTALGFAYKSRQPIEID 418

Query: 345 DWEMLAGRNLDIE-----CERNLQRQGFIERVQFSR-LRCTQRGMTMLDSVIA 391
            +    G +L  +         L  +G I           T  G  + + +I+
Sbjct: 419 RFRREYGVDLVEDEPFKTVFSELLSKGLIRSTDNGNAFLPTLNGEALHEEIIS 471


>gi|167576803|ref|ZP_02369677.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           TXDOH]
          Length = 490

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 78/413 (18%), Positives = 153/413 (37%), Gaps = 34/413 (8%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTG- 67
            GQG     +Y H+P C   C +C++              + +  + + E     Q    
Sbjct: 60  PGQG-KPAHLYYHFPLCEYICHFCNYVKQLASPTSRDAQLDRWTDALIKESTLYAQQVPW 118

Query: 68  --PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQG 124
                I S + GGGT +++ P ++  ILD +   + V+   E+ IE NP +  +++  + 
Sbjct: 119 ITGALIESFYIGGGTAAVLTPAHLKRILDHVRSTFHVTPECELNIEGNPDNFCDIDKVRA 178

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
               G NR S+GVQS   +  +F  R H    +  AI   R+     + D+++ LP QT 
Sbjct: 179 LSDIGFNRFSVGVQSFTPEVNQFTNRGHTPDMSRQAILNLRSTGLPFNVDMMFGLPHQTP 238

Query: 185 TQWEMELQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVD--------L 235
                +L+  +   V  +++Y+L   ++ ++        ++      +            
Sbjct: 239 ETVSEDLRTLVELRVPTITIYRLRNADRQSMGIGNRAVWNVPKVRNRLVEQGLFPTLGAT 298

Query: 236 YNLTQSITSAHGLHAYEISN---HSFLGAESLHNL-----NYW-RYGDYIGIGPGAHSRV 286
           Y + +        + Y+ S     S  G     N+     N W R+   +  GPGA+  +
Sbjct: 299 YEMRERAVEHLVRNGYQPSPCGWWSLPGTYRDGNIPRVSRNKWQRFDTMLAFGPGAYGWL 358

Query: 287 KVGSHRVAIS-IEKHPESWLKMVR-KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
              +  V  +        +L  +   +   +     L+  Q     L    + R+ I + 
Sbjct: 359 AGANQSVIQTHNGSDISGYLHHMESSDTPPLAFGRLLTGNQAVGTALGFAYKSRQPIEID 418

Query: 345 DWEMLAGRNLDIE-----CERNLQRQGFIERVQFSR-LRCTQRGMTMLDSVIA 391
            ++   G +L  +         L  +G I           T  G  + + +I+
Sbjct: 419 RFKREYGVDLAEDEPFKTVFSELLTKGLIRSTDNGNAFLPTLNGEALHEEIIS 471


>gi|332709557|ref|ZP_08429518.1| coproporphyrinogen III oxidase family Fe-S oxidoreductase [Lyngbya
           majuscula 3L]
 gi|332351816|gb|EGJ31395.1| coproporphyrinogen III oxidase family Fe-S oxidoreductase [Lyngbya
           majuscula 3L]
          Length = 440

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 78/389 (20%), Positives = 151/389 (38%), Gaps = 24/389 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-- 66
           N+     + +L +Y+H P+C   C +C F+  V +     + + +    EM+ + +L   
Sbjct: 27  NSPKPAATENL-LYLHIPYCHDMCRFCPFHVRVDKGSEIYDRYTEVLCKEMELVAKLPYV 85

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGY 125
              S  +++FGGG+PS+    N+  I   ++K + +  N EI+ E  P ++ +       
Sbjct: 86  SDMSFKAVYFGGGSPSIFSVNNLRKIFAHLSKCFQIEPNAEISFEGEPKTLSDPARLDLL 145

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTM 184
           ++  V RIS G+Q+ +E+            +       AR   F  ++ D++Y LP Q +
Sbjct: 146 KEYNVKRISFGLQTYDERMRELFNIAATLQDVDNCTKNARERGFEDINVDMMYDLPGQDI 205

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS-IT 243
           T    +L     +  D L  Y L         KM    D  +PS+      + L Q   T
Sbjct: 206 TALNYDLAHLKDHDFDSLDYYNLHYFAFPKKIKM-GMKDGTIPSKPSQQMHFALQQQVRT 264

Query: 244 SAHGLHAYEISN--HSFLGAESLHNLNYWRYG------DYIGIGPGAHSRVKVGSHRVAI 295
           +   +  Y++++   +       +    W  G      + I +G  A   V    +    
Sbjct: 265 TLKEMGYYDVADPIFAKKPQVCEYFRLIWGGGKGDHSAEMIALGSSARGYVNGYCYMNLG 324

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +     E +LK V      + EK  LS     +      ++  E I     + +  +++ 
Sbjct: 325 NT----EQYLKTVEAGQLPL-EKLSLSLPTPENRGAAFFVKFFE-IDKAHEKAI--QSIP 376

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMT 384
                  ++ G I     S  + ++ G  
Sbjct: 377 QNVWDFWRQNGLIYETAQS-WKLSEVGKL 404


>gi|282882040|ref|ZP_06290681.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           lacrimalis 315-B]
 gi|281298070|gb|EFA90525.1| oxygen-independent coproporphyrinogen III oxidase 2 [Peptoniphilus
           lacrimalis 315-B]
          Length = 458

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 61/310 (19%), Positives = 133/310 (42%), Gaps = 28/310 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +   +Y+H PFC  +C YC F++ V   ++     I++ L E+  ++     +   +I+ 
Sbjct: 147 DGYSIYIHIPFCPSRCSYCSFDAMVIDEEIIDIY-IEALLKELSSLKNYYNKKP-KTIYI 204

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISL 135
           GGGTPS I  + +  I+D + K++  +   E T+E     +   +  +  ++ GV+RIS+
Sbjct: 205 GGGTPSSIGWKRLEKIIDEVYKDYGFAD--EFTVECGRTDTFSSDLLRMLKEKGVDRISI 262

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
             QS  ++ +R L R++   +       A  + F  ++ DLI  LP +        +++ 
Sbjct: 263 NPQSFNKEIIRNLNRDNTNFDF--WYEEARNHNFKSINMDLIVGLPGENRDSIINSIKKV 320

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY--- 251
                D+++++ L+++KG+  Y      D    ++    D+   ++     +    Y   
Sbjct: 321 NDLEPDNITIHTLSLKKGSRLY------DENFINDKDYWDVMEFSKKFMEENNYFPYYLY 374

Query: 252 ---------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRVAIS-IEKH 300
                    E   ++  G    +N+       D +G G  + S++   +H    +   K 
Sbjct: 375 RQKRMALSGENIGYAKQGHICKYNVISMEEIEDILGFGISSSSKIMDKNHNFKRTFNYKS 434

Query: 301 PESWLKMVRK 310
              ++  +  
Sbjct: 435 LNDYINRIND 444


>gi|315638629|ref|ZP_07893803.1| radical SAM domain protein [Campylobacter upsaliensis JV21]
 gi|315481253|gb|EFU71883.1| radical SAM domain protein [Campylobacter upsaliensis JV21]
          Length = 444

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 154/355 (43%), Gaps = 24/355 (6%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
               S  +Y H PFC   CPYC F+ +     + + N+ QS   E+Q ++      + ++
Sbjct: 37  AKEKSYMLYAHIPFCHTFCPYCSFHKYYYDENLAK-NYFQSLRKELQIIKD--KGFNFNA 93

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++      ++   ++R+
Sbjct: 94  MYVGGG-TTLINEEELLRTLELCKKLFDIK---EISCESDPNHIDPKKLTMFKGL-IDRL 148

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R H   ++      I  A  I P  S DLI+ LP Q+  Q   +
Sbjct: 149 SCGIQSFDDETLKKVARYHKFGSSEVLQEKIAKALGILPIFSIDLIFNLPTQSKEQLLND 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  A   +   ++ Y L     +   K +    L +  ++   + Y +       +    
Sbjct: 209 LNIAKKLSPQQITTYPLM---KSNLTKDNIAKSLGVSFKDNEFEFYQIICEFFKDYT--- 262

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +  ++  +++
Sbjct: 263 -QNNAWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNTYTTLIK 317

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR 364
           +  +A + K     +++   ++ +       + +  +      +L+ E    L+ 
Sbjct: 318 EKQNANIAKAHFDPKERLK-YVFLTEIFSGSLELTHFNRTLKCDLEKELFIELKA 371


>gi|83718156|ref|YP_438500.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           E264]
 gi|167614971|ref|ZP_02383606.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           Bt4]
 gi|257141551|ref|ZP_05589813.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           E264]
 gi|83651981|gb|ABC36045.1| putative coproporphyrinogen III oxidase [Burkholderia thailandensis
           E264]
          Length = 490

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/408 (18%), Positives = 150/408 (36%), Gaps = 33/408 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTG---PRS 70
               +Y H+P C   C +C++              + +  + + E     Q         
Sbjct: 64  KPAHLYYHFPLCEYICHFCNYVKQLASPTSRDAQLDRWTDALIKESTLYAQQVPWITGAL 123

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAG 129
           I S + GGGT +++ P ++  ILD +   + V+   E+ IE NP +  +++  +     G
Sbjct: 124 IESFYIGGGTAAVLTPAHLLRILDHVRSTFHVTPECELNIEGNPDNFCDIDKVRALSDIG 183

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
            NR S+GVQS   +  +F  R H    +  AI   R+     + D+++ LP QT      
Sbjct: 184 FNRFSVGVQSFTPEVNQFTNRGHTPDMSRQAILNLRSTGFPFNVDMMFGLPHQTPETVSE 243

Query: 190 ELQRALSYAVDHLSLYQL-TIEKGTLFYKMHKDGDLVLPSENVAVD--------LYNLTQ 240
           +L+  +   V  +++Y+L   ++ ++        ++      +            Y + +
Sbjct: 244 DLRTLVELRVPTITIYRLRNADRQSMGIGNRAVWNVPKVRNRLVEQGLFPTLGATYEMRE 303

Query: 241 SITSAHGLHAYEISN---HSFLGAESLHNL-----NYW-RYGDYIGIGPGAHSRVKVGSH 291
                   + Y+ S     S  G     N+     N W R+   +  GPGA+  +   + 
Sbjct: 304 RAVEHLVRNGYQPSPCGWWSLPGTYRDGNIPRVSRNKWQRFDTMLAFGPGAYGWLAGANQ 363

Query: 292 RVAIS-IEKHPESWLKMVR-KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            V  +        +L  +   +   +     L+  Q     L    + R+ I +  ++  
Sbjct: 364 SVIQTHNGSDISGYLHHMESSDTPPLAFGRLLTGNQAVGTALGFAYKSRQPIEIDRFKRE 423

Query: 350 AGRNLDIE-----CERNLQRQGFIERVQFSR-LRCTQRGMTMLDSVIA 391
            G +L  +         L  +G I           T  G  + + +I+
Sbjct: 424 YGVDLAEDEPFKTVFSELLTKGLIRSTDNGNAFLPTLNGEALHEEIIS 471


>gi|310829078|ref|YP_003961435.1| hypothetical protein ELI_3513 [Eubacterium limosum KIST612]
 gi|308740812|gb|ADO38472.1| hypothetical protein ELI_3513 [Eubacterium limosum KIST612]
          Length = 481

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 127/316 (40%), Gaps = 24/316 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSI-- 71
               + VYV  P C+ KC YC F S V  + +     ++++ L E++   +    + I  
Sbjct: 153 SQKKVSVYVGIPLCIAKCSYCSFISTVADKKQTIVSEYLENLLYEVRLTGRYLKEKGIAT 212

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +++ GGGTPS+++   +  +L  + +   +    E T EA  P +  +   +  +  GV
Sbjct: 213 DTLYIGGGTPSILDEGQLETLLTTLDEELDLQGLREYTFEAGRPETTNLRKLEILKAHGV 272

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM 189
           +R+ L  Q++   +L  + RN+     +      R   F  ++ DLI  L +++   +  
Sbjct: 273 DRVCLNPQTMNADTLAAVNRNYPPQAILDTYETIREVGFESVNMDLILGLNRESEKAFMR 332

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L + ++   ++++++ L ++KG+              S++         Q      G  
Sbjct: 333 SLGQVIALGPENITIHCLAVKKGSAIKTATGRQVENPYSKDFCAG----IQEELGRRGYR 388

Query: 250 AY------------EISNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVG--SHRVA 294
            Y            E   +     E ++N+         IGIG G+  ++ V        
Sbjct: 389 PYYLYRQKYTQGNGENIGYCLENREGIYNILMMAEKQSIIGIGAGSSGKLYVPEIDRFDR 448

Query: 295 ISIEKHPESWLKMVRK 310
           I   K  +++ +   +
Sbjct: 449 IFTVKDVKTYNERTEE 464


>gi|328883537|emb|CCA56776.1| coproporphyrinogen III oxidase [Streptomyces venezuelae ATCC 10712]
          Length = 489

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 82/403 (20%), Positives = 150/403 (37%), Gaps = 36/403 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSH-VRRYKVG------QENFIQSFLTEMQWMRQLTG 67
             +   +Y H P C   C +C++    V R K         +  I+     +     L+ 
Sbjct: 62  AGHPAHLYFHLPLCNYICHFCNYVKRLVPRGKEDPSLRLWSDLLIEESRRYLDRFDWLSQ 121

Query: 68  PRSISSIFFGGGTPSLI--EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            R + S + GGGT +L+   P+ I  ++    +N+ +S NVE  IE NP + + ++ +  
Sbjct: 122 AR-VESFYIGGGTAALLLNSPEYIEPLVRHARENYDLSDNVEFNIEGNPENFQRHHLETA 180

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              G NR SLGVQSL+++   F  R H+++++I AI          + D+++ LP QT  
Sbjct: 181 LGLGFNRFSLGVQSLQDEVNDFTKRRHSSAQSIEAIENLLATGCPFNVDMMFGLPYQTPE 240

Query: 186 QWEMELQRALSYAVDHLSLYQL------------TIEKGTLFYKMHKDGDLVLPSENVAV 233
               ++       V  +++Y+L                     +     +   P  +   
Sbjct: 241 SVRRDMTILTDLGVPTITIYRLRNADREEMGIGNRAVWNNPAVRERLISEGRFPDLDSTY 300

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL-----NYWR-YGDYIGIGPGAHSRVK 287
            +      +    G +       S     S  N+     N W  Y   I  GPGA+  + 
Sbjct: 301 AMRQEAVEVLLEKGYYPSPCGWWSRPDTYSGGNIPQTSKNKWEHYNTMIAYGPGAYGWLT 360

Query: 288 VGSHRVAIS-IEKHPESWLKMVRKN-GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                   +        ++  ++KN G  +     LS  +     L    +  + I ++ 
Sbjct: 361 GDQEEFLQTHNITDISKYVSFMQKNDGLPLNFGRRLSGHKAIGTALGFNFKANQPIDLQR 420

Query: 346 WEMLAGRNL-----DIECERNLQRQGFIERVQFSR-LRCTQRG 382
           ++   G +L            L  +G +E V     L+ T  G
Sbjct: 421 YKDRFGADLMEMEPFASAFAELLERGLVEMVNDGTALKPTLDG 463


>gi|86153807|ref|ZP_01072010.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842768|gb|EAQ59980.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 448

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 83/402 (20%), Positives = 169/402 (42%), Gaps = 42/402 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        
Sbjct: 36  TPKQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDF 92

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   ++
Sbjct: 93  TSMYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-ID 147

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q  
Sbjct: 148 RLSCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLL 207

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L+ A + A   ++ Y L     +   K +    L +  ++     Y +       +  
Sbjct: 208 NDLEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFAYYQIICEFFKDYT- 263

Query: 249 HAYEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K 
Sbjct: 264 ---QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKF 316

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ-- 365
           +++  +A + K     ++    ++ +       I +  +      NL+ E    L     
Sbjct: 317 IQEKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKT 375

Query: 366 -GFIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            G I + Q + L  T+               GM ++ +V  +
Sbjct: 376 SGAIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|157414659|ref|YP_001481915.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385623|gb|ABV51938.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747298|gb|ADN90568.1| Radical SAM domain protein [Campylobacter jejuni subsp. jejuni M1]
          Length = 448

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 169/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        SS
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFSS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YIFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|257065452|ref|YP_003145124.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
 gi|256793105|gb|ACV23775.1| Fe-S oxidoreductase, coproporphyrinogen III oxidase [Slackia
           heliotrinireducens DSM 20476]
          Length = 461

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 151/426 (35%), Gaps = 61/426 (14%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +      +Y+H PFC + CPYC FN      +     + ++   E+  +++L       S
Sbjct: 24  EPGQPYMLYMHVPFCERLCPYCSFNRFP-HSEERTVRYFKNLRRELMMVKEL--GYDFDS 80

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+++  + +   +D     +++    E++ E NP+ +     +  R   V+R+
Sbjct: 81  LYIGGGTPTIMMDE-LCDTIDLARSEFSIQ---EVSCETNPNHLTPLYLEQLRGR-VDRM 135

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S+GVQS +   L+ + R     +  EA+  I +A   F  ++ D+IY  P QT      +
Sbjct: 136 SVGVQSFDNDLLKQMDRFEKYGSGEEALERIKVAVPYFKSLNVDMIYNFPAQTEKSLRRD 195

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+  L       + Y L         +      +           Y +           A
Sbjct: 196 LEMILESGTSQTTFYPLMASPS---VEKSLARTVGKVDYEREQRFYEIICDTLIGGDNPA 252

Query: 251 YEI-SNHSF------LGAESLHNLN-----------------------------YW-RYG 273
           +++ S  +F             N+                              Y   Y 
Sbjct: 253 FKLGSAWTFNALLKGPQGAKKANVASKVGVNAAGDVLDHDGRVAAREEGQMIDEYIVDYE 312

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD-EFLM 332
           +Y  IG G  + +    +    SI      + +++     +++ K   S   +    F+M
Sbjct: 313 EYPAIGSGGMTYLGHTQYVNTFSI----REYNELIENGSMSIMGKAKFSKTNRMRYRFMM 368

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECERN---LQRQGFIERVQFSRLRCTQRGMTMLDSV 389
               LR  +  + WE   G  +          ++  G        ++  T +G  ++  +
Sbjct: 369 QLFGLR--LDKRQWERDFGCTVAAGLPVEYLFMKLNGAFALDDDEQITLTPKGRYLMVVM 426

Query: 390 IANLAV 395
           +    +
Sbjct: 427 MRQFFI 432


>gi|325289605|ref|YP_004265786.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324965006|gb|ADY55785.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 406

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 163/382 (42%), Gaps = 38/382 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H P+C K C +C+    +RR     +++ +  + E++   +L   R  +  +++FGG
Sbjct: 42  IYIHIPYCRKICSFCN---MMRRLGSPGDDYARLIIREIRSYGELDYIRQLTFQAVYFGG 98

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ +  + I  IL  + +++ ++ + EIT+E+  S +         + GVNRIS+G+Q
Sbjct: 99  GTPTTLSSRAIQEILAALRESFRLADDAEITLESTVSELTEEKINVLHEGGVNRISVGIQ 158

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +  ++  + LGRN +  EA   + L ++  F  ++ D+IY  P QT  + + +L +  S 
Sbjct: 159 TFNDRGRQLLGRNGSGKEAYQKLLLLKSLGFENVNIDIIYHYPHQTREELDEDLNKVFSL 218

Query: 198 AVDHLSLYQLTIEKGTLFY---------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +   S Y L +   +                   L   S +    +  LT+   S H  
Sbjct: 219 GLASFSFYSLIMHPDSALQISSPSENDTDRALFDRLYARSIDQGFAILELTK--LSRHDR 276

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
           + Y  + H      +L        GD I              +   IS+E + ++++   
Sbjct: 277 YRYITARHDGADTLALGAGAGGTLGDMI--------------YMNPISLENY-QNYV--- 318

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFI 368
            ++G        ++  Q      ++G   R  I   ++  L G       ER L  +G+ 
Sbjct: 319 -ESGSDRKRVGVVTKNQYRTVARLIGAMQRGRIPRHEYADLLGGRGQRLTER-LLAEGYA 376

Query: 369 ERVQFSRLRCTQRGMTMLDSVI 390
              +    R T +G+   +++ 
Sbjct: 377 TETEDGC-RLTPKGIYWGNNIC 397


>gi|57237418|ref|YP_178431.1| coproporphyrinogen III oxidase [Campylobacter jejuni RM1221]
 gi|57166222|gb|AAW35001.1| radical SAM domain protein [Campylobacter jejuni RM1221]
 gi|315057786|gb|ADT72115.1| Oxygen-independent coproporphyrinogen III oxidase, putative
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 456

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI+ + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|154174875|ref|YP_001407468.1| coproporphyrinogen III oxidase [Campylobacter curvus 525.92]
 gi|112803271|gb|EAU00615.1| radical SAM domain protein [Campylobacter curvus 525.92]
          Length = 454

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 76/392 (19%), Positives = 168/392 (42%), Gaps = 27/392 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           N T +      +Y H PFC   CPYC F+ +    ++ +  + ++   EM+ ++      
Sbjct: 37  NKTPREGKKYMLYAHVPFCHTFCPYCSFHKYHYEQELAK-IYFENLREEMRQVKD--AGF 93

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +  S++ GGG  +LI    +   L    K + +     I+ E++P+ +   + + +    
Sbjct: 94  NFGSLYVGGG-TTLINEAELEKTLRLAKKLFDIED---ISAESDPNHISPESLRRF-DGL 148

Query: 130 VNRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           ++R+S+GVQS ++ +L+ +GR     ++ E  A +  A N  P +S DLI+ LP QT  Q
Sbjct: 149 IDRLSVGVQSFDDDTLKRVGRFEKFGSSKEVRARLEKALNFLPVISLDLIFNLPNQTKEQ 208

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +++ + S A   ++LY L     +   + +    L + + +   + Y +     S  
Sbjct: 209 LVNDIKISKSIAPQQITLYPLM---KSDLTRENIARSLGVSNVDNEREFYEIIVDEFSRG 265

Query: 247 GLHAYEISN-HSFLGAESLHNLNYW--RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES 303
           G H    SN  +F    S+   + +     +Y+G+G GA S +       A ++      
Sbjct: 266 GYHQ---SNAWAFSNQSSVDMRDEYVGSNHEYVGVGSGAFSFLDGELVINAFNLL----D 318

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ 363
           + + +++    V+ K   S +++   ++ +       + +  +      N+  +    L 
Sbjct: 319 YGRKIKERTSPVIAKCGFSKKERLK-YIFLTELFDGAVDILKYNENNRANIHKDLFVELN 377

Query: 364 RQGFIERV--QFSRLRCTQRGMTMLDSVIANL 393
               +  +  +   ++ T  G  +   ++ + 
Sbjct: 378 LLKLVNAIYEENGCIKPTFFGRYICVVLMRDF 409


>gi|209967082|ref|YP_002299997.1| coproporphyrinogen III oxidase [Rhodospirillum centenum SW]
 gi|209960548|gb|ACJ01185.1| oxygen-independent coproporphyrinogen-III oxidase, putative
           [Rhodospirillum centenum SW]
          Length = 498

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 6/268 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PR 69
           TG+   ++  YVH PFC   C +C F  +  R + G   ++ + + +M    +       
Sbjct: 97  TGRTRRAVA-YVHVPFCENHCLFCGFYQNPWRAEAG-APYVDAVIAQMAAFARTPAHAGP 154

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            + +++ GGGTP+ +   +IA ++  I  +  ++ + EIT+E    S  +   +    AG
Sbjct: 155 PLQAVYLGGGTPTALSGPDIARLVRAIRTHLPLAPDCEITLEGRIHSFGLEKARAAFDAG 214

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           V R+S GVQS  +   R LGR     + IA +  L       +  DLIY LP QT     
Sbjct: 215 VTRMSFGVQSFSDTIRRPLGRKAPRRQLIAELEGLVALDRGAIVADLIYGLPDQTPEDVA 274

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +++   +  +D   LY L +  GT      + G   + +       +   +    A G+
Sbjct: 275 ADVRLCAALGLDGFDLYSLNVIPGTPLLSAIEKGKKRVAAPEELGRYFAAGEEAAEAEGM 334

Query: 249 HAYEISNH-SFLGAESLHNLNYWRYGDY 275
            +   ++    L   +++NL      D 
Sbjct: 335 VSISTTHWQGSLRERNVYNLAVKTGADC 362


>gi|221640156|ref|YP_002526418.1| Coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacter
           sphaeroides KD131]
 gi|221160937|gb|ACM01917.1| Coproporphyrinogen III oxidase, anaerobic 2 [Rhodobacter
           sphaeroides KD131]
          Length = 371

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 132/363 (36%), Gaps = 22/363 (6%)

Query: 48  QENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
              +  +  +E+  +R +L     ++ + +GGGTP+L+ P  I  +   I       +  
Sbjct: 1   MRAYAAALKSELALLRARLAPGVRLARMHWGGGTPTLLPPTLIHELALAIRDAVPSDAET 60

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           + ++E +P+ ++        +AG+ R+S+GVQ  +    + +GR  +       +   R+
Sbjct: 61  DFSVEIDPTEIDSARLDALFEAGMTRVSIGVQDFDPLIQQSIGREQSFELTQRLVEDLRH 120

Query: 167 IFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              R +  D++Y LP QT       +Q+ LS + D +++         +  +        
Sbjct: 121 RGLRGLDADILYGLPHQTAPGVADSIQKLLSLSPDRVAVLGYAHVPA-VSRRQLMIPTAS 179

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-------NLNYWRYGD---- 274
           +P     +DL+   +++    G     + + +  G    H         ++  Y D    
Sbjct: 180 IPGPEERLDLFETARTLILWDGYQQVGLDHFARAGDPLAHAHACGRLRRSFQGYTDDRAE 239

Query: 275 -YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
             IG+G  A SR   G  + A S   H    L+ +R    +      LS E +    ++ 
Sbjct: 240 VLIGLGASAISRFPQGFTQNAPSTSDH----LRAIRSGRFSTARGHVLSDEDRLRGRIIE 295

Query: 334 GLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L     IS              L+            +  +    L   + G  +   V 
Sbjct: 296 QLLCEFRISRAQILARFAVAPERLETLFRTCAAAFPGVVEITGHGLEILEEGRPLARIVA 355

Query: 391 ANL 393
            + 
Sbjct: 356 RSF 358


>gi|218562021|ref|YP_002343800.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|112359727|emb|CAL34513.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
          Length = 448

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKN--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI+ + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YVFLTGIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|290968829|ref|ZP_06560366.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781125|gb|EFD93716.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 483

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 132/309 (42%), Gaps = 24/309 (7%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPR--SISSIF 75
            +Y+  P+C   C YC F S    ++       F ++ + +++    L       + SI+
Sbjct: 159 ALYIGIPYCSGHCLYCSFPSRQVTHEPVSRLSRFAEALVKDVEDWAALCAQYDLQVQSIY 218

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRIS 134
            GGGTP+ +  Q +  +L  + ++   SS  E T+EA  P +  +      R+ GVNRIS
Sbjct: 219 IGGGTPTCLSVQFLQPLLQVVQQH--FSSAGEWTVEAGRPDTATLEKLTLLRRCGVNRIS 276

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQR 193
           +  Q++++  L  LGRNH   +        R   FP ++ D I  LP+QT+   E  ++ 
Sbjct: 277 VNPQTMQQSLLDRLGRNHRVEDIYDMYEHCRQLGFPVINMDFIAGLPQQTVVDMEENMKI 336

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 ++++++ L ++K    ++        +P       +  + +     +G   Y +
Sbjct: 337 VCQLQAENVTIHTLALKKSAPLFQHPLRQ--YIPEAATVEKMLAICRQYLRHNGYIPYYM 394

Query: 254 S------------NHSFLGAESLHNLNYWRYGDY-IGIGPGAHSRVKVGSHRVAISIE-K 299
                         ++  G  S +N+         +  GPG  ++   G + +A   E K
Sbjct: 395 YRQKYMATNFANIGYARPGTISTYNIEMMEERQTVLAAGPGGATKFLTGPYSLAKLYEPK 454

Query: 300 HPESWLKMV 308
             +++++ +
Sbjct: 455 DIDAYIQAL 463


>gi|240850036|ref|YP_002971429.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
 gi|240267159|gb|ACS50747.1| coproporphyrinogen III oxidase [Bartonella grahamii as4aup]
          Length = 478

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 92/387 (23%), Positives = 155/387 (40%), Gaps = 20/387 (5%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           + ++ +Y+H PFC   C +C F     ++    E+++ +  TE++            I S
Sbjct: 50  ARTISLYLHIPFCETICSFCPFQKGAYKHVKQIESYMSALTTEIRTKGNFIRSLRGPIRS 109

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPSL+   NI  I   +   + +SS  E T+E+ P S   +     R+ GVNRI
Sbjct: 110 IYIGGGTPSLLSADNIRHIGKVLHAEFELSSLTEFTLESEPKSTTRDKLYAAREIGVNRI 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S G+QS  E+            +    +  ++ I   + FDL+Y +  Q   +   +L++
Sbjct: 170 SFGIQSFIERFRSLFNLTSTREQINNTVAWSQEIIGHVGFDLLYGMHNQQAEELLYDLKQ 229

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI------TSAHG 247
           A     + ++LY +     T           + PS      +  L   I       +   
Sbjct: 230 ASELHPETINLYAINNLAITSQLHKSYAQKGLKPSSLQHRQMLRLFSDIVMRSCGYAPCN 289

Query: 248 LHAY-EISNHSFLGAESLHNLNYWRYGDYI---------GIGPGAHSRVKVGSHRVAISI 297
            H+Y +I+N++ L      + NY+RY  Y+         G G  A S +     R   S 
Sbjct: 290 GHSYIKIANNTPLTLAKTSSANYFRYHKYLHGYHDDYVVGFGASAMSILGSLVTRANPSR 349

Query: 298 EKHPESW-LKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI 356
             +     LK     G + V   ++S+EQQA + L M L        +     A  +   
Sbjct: 350 SGYITDIQLKGKSLKGKSKVYYNWVSAEQQASKTLCMRLPYNGYAKKERIGWTALPSFVY 409

Query: 357 ECERNLQRQGFIERVQFSRLRCTQRGM 383
              + L     +       L+ TQRG 
Sbjct: 410 NNLQQLIGADLVAESDND-LQLTQRGW 435


>gi|86151482|ref|ZP_01069697.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315123925|ref|YP_004065929.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841829|gb|EAQ59076.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315017647|gb|ADT65740.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 448

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 168/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   +NR+
Sbjct: 95  MYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDSNKLSMFKGI-INRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|300786982|ref|YP_003767273.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
 gi|299796496|gb|ADJ46871.1| oxygen-independent coproporphyrinogen III oxidase [Amycolatopsis
           mediterranei U32]
          Length = 477

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/412 (17%), Positives = 145/412 (35%), Gaps = 37/412 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQ 60
           ++L   +  +    S  + ++ + P C  +C +C +   + + K+    +++   + E +
Sbjct: 60  EFLRDLDAQLA-SPSGPIHLWSYIPTCAYRCRFCQYPVVLVKGKIEKAADWVDLNIAEAR 118

Query: 61  WMR---QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                        +      GGTPSL+    I  +L+    ++  +    I  E +PS+ 
Sbjct: 119 LWLDAVPHLAGAEVGEFNVFGGTPSLLPEPEIRRLLEFYRAHFGFTDRTTIRFEGDPSTF 178

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176
                +  R+ G  ++S GVQS ++  L   GR H A   +  +  A    F  +S DL+
Sbjct: 179 TPAKLELLRELGCTKLSSGVQSFDDHVLELCGREHTAQMCVDFVRNATAAGFEWVSIDLM 238

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE-----------KGTLFYKMHKDGD-- 223
           Y L  QT+     +L   L   V  +   +L +            +    +++    D  
Sbjct: 239 YGLLDQTLDSVRRDLDVVLENEVTAVVCTKLHLASYSDTRTGVTGEKPAAWQLPSYRDKL 298

Query: 224 ----LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY---- 275
                  P+      +  L      A G   +     +  G       +     D     
Sbjct: 299 VRDGHRWPTLGEQYQMRELLTEGLRAAGYTEHPTMYFARDGLGPEKWKSIMVDQDKQEAE 358

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
           + IG G  S  +       ++  ++PE+    V      +      + E QA   + M L
Sbjct: 359 VAIGLGGSSSCRASEAITDVNSRRYPET----VLSGRIPLGSATRFTPEAQAARAVKMAL 414

Query: 336 RLREGISVKDWEMLA-GRNLDIE----CERNLQRQGFIERVQFSRLRCTQRG 382
              + +          GR+L  E      R+L  +G + R++   +  T  G
Sbjct: 415 TTLQPLRDSLHSARFPGRSLFAEPWLGKFRSLASRGLV-RLRPGVVELTPAG 465


>gi|86148937|ref|ZP_01067169.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597217|ref|ZP_01100452.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148926455|ref|ZP_01810138.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205355986|ref|ZP_03222754.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|85840295|gb|EAQ57552.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190278|gb|EAQ94252.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|145844618|gb|EDK21724.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205346110|gb|EDZ32745.1| putative oxidoreductase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284925634|gb|ADC27986.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315930669|gb|EFV09690.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 448

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKN--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI+ + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|291287047|ref|YP_003503863.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884207|gb|ADD67907.1| Coproporphyrinogen dehydrogenase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 439

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 75/373 (20%), Positives = 145/373 (38%), Gaps = 38/373 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC   CPYC F+      +  ++ F+     EM+    L    + +S +FGGGT
Sbjct: 68  LYIHIPFCATLCPYCSFHRFKIHEETARKYFL-LLREEMRMTADL--GYNFTSAYFGGGT 124

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            S++ P  +A  ++   + + +    EI+ E +P+ ++  + +      ++R+S+GVQS 
Sbjct: 125 TSIL-PDELAKTIELARELFDIK---EISCETDPNHIDDASMKH-TVGRIDRLSVGVQSF 179

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +  L  +GR     +  +    I      F  ++ D+IY  P QT  +   +++     
Sbjct: 180 NDMHLESIGRLEKFGSGEKQFEKISNILKEFSVVNIDMIYNFPSQTEAELITDIKTVRKL 239

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           +   ++ Y L       F        L         + Y +   I         + ++ +
Sbjct: 240 SPQQVTFYPLMYAP---FAGEKLKKLLGKSEHKTEAEFYKI---ILKRMTSPYIQKTSWN 293

Query: 258 FLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK-MVRKNGHAV 315
           F   E      Y   + +Y+G+G GA S +    +  + S++++ E         +    
Sbjct: 294 FAINEEQFIDEYVVEHSEYVGLGSGAFSFLNNTLYANSFSLKRYAEKIRNGRSSVSKSVS 353

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQF 373
             K  +S  +   E  M GL              +GR           L+  G + R   
Sbjct: 354 FSKHSISQYRMMVE--MFGL--------------SGRPAHRPLLEYTALKSLGAVSRTGS 397

Query: 374 SRLRCTQRGMTML 386
             +  T +G  +L
Sbjct: 398 ETV-ITPKGRFIL 409


>gi|255323188|ref|ZP_05364323.1| radical SAM domain protein [Campylobacter showae RM3277]
 gi|255299711|gb|EET78993.1| radical SAM domain protein [Campylobacter showae RM3277]
          Length = 454

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 76/371 (20%), Positives = 160/371 (43%), Gaps = 35/371 (9%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+ +    ++ +  + ++   EM+ +++       SS++ GGG 
Sbjct: 48  LYAHVPFCHTFCPYCSFHKYHYEQELAK-IYFENLREEMRQVKE--AGFDFSSLYVGGG- 103

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI    +   L    + +++     ++ E++P+ +   +   +    ++R+S+GVQS 
Sbjct: 104 TTLINEPELEKTLKLAKELFSIED---VSAESDPNHISPESLTRF-DGLIDRLSVGVQSF 159

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++L+ +GR     +A E    +  A    P +S DLI+ LP QT  Q   ++  A S 
Sbjct: 160 DNETLKRVGRYEKFGSAEETKRKLEKALGKIPVISLDLIFNLPNQTKEQLINDINVAKSI 219

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA---YEIS 254
           +   ++ Y L   + T   + +    L + + +   + Y +  S  +  G      +  S
Sbjct: 220 SPQQITFYPLMKSELT---RENIARSLGVSNVDNEREFYEIIVSEFAKSGYRQSNAWAFS 276

Query: 255 NHSFLGAESLH---NLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           N    G    +   NL      +Y+G+G GA S +       A ++      + + V+  
Sbjct: 277 NEKSAGLRDEYVGSNL------EYVGVGSGAFSFLDGELVINAFNLL----DYGRKVKDR 326

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIECERNLQRQGFIER 370
              V+ K   S +++     +   RL +G + +K +      N++ +    L     +  
Sbjct: 327 QSPVIAKCAFSKKERLKYTFLT--RLFDGAVDIKAYNEQNDANINKDLFVELSLLKLVNA 384

Query: 371 V--QFSRLRCT 379
           +  +   ++ T
Sbjct: 385 IYEENGVIKPT 395


>gi|121613094|ref|YP_001000074.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005032|ref|ZP_02270790.1| coproporphyrinogen III oxidase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87250049|gb|EAQ73007.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 448

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 168/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y +       +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFAYYQIICEFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|257452294|ref|ZP_05617593.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058837|ref|ZP_07923322.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684513|gb|EFS21348.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 410

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 152/339 (44%), Gaps = 30/339 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS 72
            S  LG+Y+H P+C K C +C+ N   ++     E + +    ++++  +        + 
Sbjct: 39  SSKELGLYLHTPYCDKICSFCNMNR--KKVDAELEEYHEYLCQQIEYYGKFPFCQSSELE 96

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +FFGGGTP++   + +  IL  + KN+  S++ E+T E    ++ V   +  +  GVNR
Sbjct: 97  VVFFGGGTPTIYSNRQLENILQCLQKNFKFSNSYEMTFETTLHNLSVEKAKLLQANGVNR 156

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMEL 191
           +S+G+Q+  ++  + L R+    EA   +   R  F   +  D+IY  P+Q+  +   ++
Sbjct: 157 LSVGIQTFSDRGRKILNRSFGKKEAFQRLKALREAFHGLLCIDIIYNYPEQSDEEVLEDI 216

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             A    +D +S Y L I++G+   K               +  +      +++T   G 
Sbjct: 217 HLASQLGIDSISFYSLMIQEGSEILKNLSKESIETFYDVKRDEQLHNLFYQEALTR--GY 274

Query: 249 HAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIE---KHPESW 304
           H  E++  +    +      Y R  + + IG GA   +  +G + +   +    K+PE+ 
Sbjct: 275 HLLELTKITNGKDKYR----YIRSRNLLPIGVGAGGHLENIGCYHMNKKMTFYSKNPENT 330

Query: 305 LKMVRKNGHA------------VVEKEFLSSEQQADEFL 331
            K+ + +G              + EKE+    ++ +E++
Sbjct: 331 QKLTQLSGFFQFDSFSDKKLQELAEKEYPRLRRKIEEYI 369


>gi|146296038|ref|YP_001179809.1| coproporphyrinogen III oxidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409614|gb|ABP66618.1| coproporphyrinogen III oxidase, anaerobic [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 486

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 25/323 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLT 66
           N +    S++  +Y+  P C  KC YC F+ H   +R +     + Q+ LTE++   +L 
Sbjct: 160 NILNRVDSSAACLYIGIPICPTKCLYCSFSCHELTKRIESLLSLYTQALLTELEKTYKLI 219

Query: 67  G--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +I+FGGG+P++I  QNI  I + +  N  V    E T EA  P ++     +
Sbjct: 220 EENKNKIVAIYFGGGSPAVIGVQNIKRIFESLFANLDVKDIRETTFEAGRPDTINRELLE 279

Query: 124 GY---RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
                +K    R+ +  Q+  +Q+L+ +GRNH   +   A  LA+   F  ++ D+I  L
Sbjct: 280 LLALYKKDFNIRLCINPQTSNDQTLKIIGRNHTFDDIKKAFELAKEYGFENINSDVILGL 339

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    ++  +   L+     ++++ L+I++ +L     K  +     E+    L +  
Sbjct: 340 PNEIEEDFKKTIYDVLNLGPASITVHTLSIKRASLL--RFKWQNYRFMDEHTVNSLLDWA 397

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRV 286
           ++I    G   Y            E   +S  G E L+N+   +   +    G  A S+ 
Sbjct: 398 RAILKERGYIPYYMYRQKNMIGNFENVGYSKKGFEGLYNVMIMQEKHNIYACGAKAVSKF 457

Query: 287 KVGSHRVAIS-IEKHPESWLKMV 308
              + R+         + ++  +
Sbjct: 458 IFENDRIERMFNPADIQIYISRI 480


>gi|148872850|gb|ABR15052.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni]
 gi|148872852|gb|ABR15053.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni]
          Length = 391

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 83/400 (20%), Positives = 168/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        SS
Sbjct: 3   KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFSS 59

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 60  MYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 114

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 115 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 175 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 228

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 229 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 283

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 284 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 342

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 343 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 381


>gi|148872848|gb|ABR15051.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni]
          Length = 391

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 3   KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKN--KGFDFTS 59

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI+ + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 60  MYVGGG-TTLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 114

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 115 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 175 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 228

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 229 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 283

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 284 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 342

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 343 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 381


>gi|332559161|ref|ZP_08413483.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
 gi|332276873|gb|EGJ22188.1| coproporphyrinogen III oxidase [Rhodobacter sphaeroides WS8N]
          Length = 371

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 130/363 (35%), Gaps = 22/363 (6%)

Query: 48  QENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
              +  +   E+  +R +L     ++ + +GGGTP+L+ P  I  +   I       +  
Sbjct: 1   MRAYAAALKFELALLRARLAPGVRLARMHWGGGTPTLLPPTLIHELALAIRDAVPSDAET 60

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           + ++E +P+ ++        +AG+ R+S+GVQ  +    + +GR  +           R+
Sbjct: 61  DFSVEIDPTEIDAARLDALFEAGMTRVSIGVQDFDPLIQQSIGREQSFELTQRLTEDLRH 120

Query: 167 IFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              R +  D++Y LP QT       +Q+ LS + D +++         +  +        
Sbjct: 121 RGLRGLDADILYGLPHQTAPGVADSVQKLLSLSPDRVAVLGYAHVPA-VSRRQLMIPTAS 179

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-------NLNYWRYGD---- 274
           +P     +DL+   +++    G     + + +  G    H         ++  Y D    
Sbjct: 180 IPGPEERLDLFETARTLILWDGYQQVGLDHFARAGDPLAHAHACGRLRRSFQGYTDDRAE 239

Query: 275 -YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
             IG+G  A SR   G  + A S   H    L+ +R    +      LS E +    ++ 
Sbjct: 240 VLIGLGASAISRFPQGFTQNAPSTSDH----LRAIRSGRFSTARGHVLSDEDRLRGRMIE 295

Query: 334 GLRLREGISVKDWEMLAG---RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
            L     IS              L+            +  +    L   + G  +   V 
Sbjct: 296 QLLCEFRISRAQILARFAVAPERLETLFRTCAAAFPGVVEITGHGLEILEEGRPLARIVA 355

Query: 391 ANL 393
            + 
Sbjct: 356 RSF 358


>gi|253584056|ref|ZP_04861254.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251834628|gb|EES63191.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 422

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 73/386 (18%), Positives = 154/386 (39%), Gaps = 32/386 (8%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFG 77
            +YVH P+C K C +C+ N   ++     +++ Q    E     Q           IFFG
Sbjct: 50  AIYVHTPYCDKICSFCNLNR--KQIDGSLDSYAQYIADEFDKYGQTNYFKKSEFEVIFFG 107

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGTP++ +P  + +IL+ I +N T++ + E T E    ++     +   K GVNR+S+G+
Sbjct: 108 GGTPTVYKPHQLEIILESIKRNVTLTKDYEFTFETTLHNLTEEKLEVMMKYGVNRLSVGI 167

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
           Q+  ++  +F  R +   E I  +   +  F   +  D+IY  P +T+ +   + +    
Sbjct: 168 QTFSDRGRKFYNRTYGKEEVIERLKKLKAFFKGDVCVDIIYNFPDETLEEVIEDARIVKE 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +   S Y L + +G+   K  +   + L    +   +   +    +      H  E++
Sbjct: 228 LELSSASFYSLMVHEGSKLSKDIEAEKVKLEEDMKKDYLLYQHFINEMLREDKYHVLELT 287

Query: 255 NHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
             +    +   N  Y +     GD   I                  + K    + K    
Sbjct: 288 KIAKNNGD---NYKYIKVRNTGGDTFPI---GVGSGGSVHGIGVYRMSKEMSFYSKQTDY 341

Query: 311 NGHAVVEKEFLSSEQQADEF-LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           +       E  S      +F ++    +R  +S ++++         E  ++ +++G + 
Sbjct: 342 H-------EKFSRLSGFMQFPIINKGDVRNILSEEEYKYF------AEKMKDYEKKGLLN 388

Query: 370 RVQFSRLRCTQRGMTMLDSVIANLAV 395
             + S    TQ G+   +++ +++ +
Sbjct: 389 EKEDS-FVLTQSGIFWGNNISSDIII 413


>gi|283955787|ref|ZP_06373278.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792742|gb|EFC31520.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 448

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 82/400 (20%), Positives = 168/400 (42%), Gaps = 42/400 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLFMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LGIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ---G 366
           +  +A + K     ++    ++ +       I +  +      NL+ E    L      G
Sbjct: 319 EKQNANIAKACFDKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSG 377

Query: 367 FIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
            I + Q + L  T+               GM ++ +V  +
Sbjct: 378 AIIKDQNA-LIATEFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|169335844|ref|ZP_02863037.1| hypothetical protein ANASTE_02270 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258582|gb|EDS72548.1| hypothetical protein ANASTE_02270 [Anaerofustis stercorihominis DSM
           17244]
          Length = 454

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 61/311 (19%), Positives = 124/311 (39%), Gaps = 26/311 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI-- 71
             N   +Y+H PFC  +C YC F S +     +    +    L E+  + ++    SI  
Sbjct: 132 DDNKYSLYIHIPFCPARCTYCSFPSKICTGNDLILNEYTNVLLKEVNMISEIIDKNSINI 191

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGV 130
            SI+ GGGTP ++  +    + + I KN     N+E T E      +            V
Sbjct: 192 DSIYIGGGTPGILNEELTHKLTNSILKNIIKDKNIEFTFELGRADMLTKEKLDILNNDKV 251

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           NRI L  QS+ +  L    R+ + +E   A  L +     ++ DLI  L   +++ +  E
Sbjct: 252 NRICLNPQSMSKDVLDNFNRDISPAEFYKAADLIKQYNFILNSDLIMGLNSDSISDFINE 311

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++  ++   ++++++ L++++ +    +  +        +V    +    S+  ++G + 
Sbjct: 312 VKTLINLKAENITIHTLSLKRSSDMDNIKYEDKD---FYDVQSKCF----SLLKSNGYYP 364

Query: 251 Y------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKV--GSHRVAI 295
           Y            E    S  G E ++N+   +     + +G G   +V          +
Sbjct: 365 YYLYKQKQSLCMGENVGFSKRGKECIYNIKTMKNKSTILALGAGGAGKVYDKKNDKTYRV 424

Query: 296 SIEKHPESWLK 306
              K    ++K
Sbjct: 425 DTTKDTNIYIK 435


>gi|256546119|ref|ZP_05473472.1| oxygen-independent coproporphyrinogen III oxidase 2
           (coproporphyrinogenase) (coprogen oxidase) [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398236|gb|EEU11860.1| oxygen-independent coproporphyrinogen III oxidase 2
           (coproporphyrinogenase) (coprogen oxidase) [Anaerococcus
           vaginalis ATCC 51170]
          Length = 435

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/332 (19%), Positives = 139/332 (41%), Gaps = 39/332 (11%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +    +Y++ PFC ++C YC + + V    V +  ++   L E+    Q+  P+ + +I
Sbjct: 123 DAKDFNLYINIPFCPQRCRYCSYPTIVS-NTVEKNLYVDFLLKEI---SQINLPKKLDTI 178

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRI 133
           + GGGTPS +  +++  IL  I + +  +   E T+EA    +++      +++  V RI
Sbjct: 179 YLGGGTPSNLSVKDLDRILSLINEKFIFN---EFTLEAGREDTLDFEKLDLFKEKNVGRI 235

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SL  Q+     L  + R  +    I     A+ +   ++ D I  L  +    +    + 
Sbjct: 236 SLNPQTFSVNVLENINRAIDLENFIRIYDYAKKLGIIVNMDFIVGLYGENRESFSKNFEI 295

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+++ + L  + G+ +++ + +G+     E+ ++ +    +  T  +    Y +
Sbjct: 296 LKKLEPDNITFHALAQKVGSKYFEENINGN-----ESESIKIAKDIEIFTKENSYKPYYL 350

Query: 254 SNHSFLGAESLHNLNY------WRY--------GDYIGIGPGAHSRVKVGSHRVAISIEK 299
                +   +L N+ Y       RY         + IG+G  A+S++  G        E+
Sbjct: 351 YRQKNIIG-NLENIGYEKENTSQRYNILINEELENIIGLGMNANSKLMNGKKY---RNER 406

Query: 300 HPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
           +   + K +        EKE     +  + F+
Sbjct: 407 NLRDYYKNI--------EKEIYDKNKLIENFI 430


>gi|325983644|ref|YP_004296046.1| Coproporphyrinogen dehydrogenase [Nitrosomonas sp. AL212]
 gi|325533163|gb|ADZ27884.1| Coproporphyrinogen dehydrogenase [Nitrosomonas sp. AL212]
          Length = 481

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/404 (16%), Positives = 138/404 (34%), Gaps = 27/404 (6%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
             N   G     L + ++ PFC   C Y   N  + R K   + ++   L +++   QL 
Sbjct: 74  INNRKPGYFRRPLSLDLYVPFCWPLCLYYHSNQILSREKASIKTYLDYLLRDIRLQGQLF 133

Query: 67  G-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                +  I+F GG  + +    ++ + + I + + +    +  IE     +   + Q  
Sbjct: 134 KDDTKVEQIYFKGG-TTFLSDAQLSKLTEEIKRYFNLIEGGDFCIEITAQPLTNCSMQAL 192

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTM 184
            K G N   +GV  L+ Q+     R  +    +  I  + R  F  +  +  Y LP Q +
Sbjct: 193 NKMGFNSAVVGVHDLDHQTNHSKQRIRSEESIVQTICDIRRAGFKSLRVEFSYGLPGQNL 252

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            ++   L + ++   D + L       G +      +G   LP      ++  L  S  +
Sbjct: 253 DEFANALLKIIATHPDQIKLLDYKQFAG-IIKPQRNNGFTELPGTEAKFEMILLAISCLT 311

Query: 245 AHGLHAYEISNHSF-----LGAESLHNLNYWRYG-------DYIGIGPGAHSRVKVGSHR 292
             G     ++  +        A+    L+Y   G       D++ +G     R+    H+
Sbjct: 312 EAGYSHIGMNLFARHDDLLAVAQRQGRLHYGLRGFSIYPDCDHLALGVSGAGRIGPILHQ 371

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
               +      +   + +N   ++    L ++      +M  L     IS    E     
Sbjct: 372 NQCDLL----QYYDKLEQNTPPILRGVMLKADDLLRRSIMYALICHSVISYDSVEAFFSI 427

Query: 353 NLDIECERNL------QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           +        L         G +  +    +  T +G   ++S+ 
Sbjct: 428 DFKQYFVTELTGLQAYAEAGLVA-LDNEEIVVTPKGQLFINSIC 470


>gi|255030665|ref|ZP_05302616.1| coproporphyrinogen III oxidase [Listeria monocytogenes LO28]
          Length = 163

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 1/151 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+H PFC   C YCDFN      +   + ++   + EM+          + ++F GGG
Sbjct: 13  AVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTVAKGPIAPVDTVFVGGG 71

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TP+ +    IA +   I     +  ++E + EANP  + ++  Q  +  GVNRIS+GVQS
Sbjct: 72  TPTTLNEAQIARLCTAIHNTLPLKKDIEFSFEANPGDLSLSKLQAMQDHGVNRISMGVQS 131

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
              + L+ +GR H   +   ++   R I   
Sbjct: 132 FNNELLKKIGRIHTVKDVYQSVENMRKIGFE 162


>gi|302348527|ref|YP_003816165.1| coproporphyrinogen III oxidase [Acidilobus saccharovorans 345-15]
 gi|302328939|gb|ADL19134.1| coproporphyrinogen III oxidase [Acidilobus saccharovorans 345-15]
          Length = 398

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 154/373 (41%), Gaps = 22/373 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +    L +YVH PFC   CP+C F S   R +     +++S   E++ +           
Sbjct: 19  EPEGPLPLYVHVPFCPFMCPFCVFFSVPYR-EAAARAYVKSLTAEVEGLMSRWEGARFPE 77

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGGTP+++  + +  +LD I         VE ++E +P  V+ N       AGV RI
Sbjct: 78  VYVGGGTPTMLT-EGVCELLDVIRSYQ---GAVEASVEGSPYDVDDNKVSMLASAGVTRI 133

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           SLGVQS     L  LGR   +SEAI +   A +    ++ D+I+  P Q       E++ 
Sbjct: 134 SLGVQSFFPDRLARLGRPRISSEAILSTIEACSRVKTVNVDIIFNYPGQREGDLIDEVEA 193

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +   + L+LY L          + +   +   SE     LY L  S     GL    +
Sbjct: 194 FYNSKANQLTLYPL-------MPSIREPATVCPCSEKRERALYRLAVSQARRLGLTQ--L 244

Query: 254 SNHSFLGAESLHNLNYWRYGD-YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           +   F  +    +  Y    D ++G+G GA S ++        +I K    +  +V K  
Sbjct: 245 TAWCFSKSSGGLSDEYIVDSDLFVGVGAGAMSHLRGLFTANTFNISK----YESLVAKGE 300

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
             V     LS E++   + + GL    G+    +    GR +     R L     +  V+
Sbjct: 301 PTVSLARRLSREEEERLYALYGL-YGLGLDKDGFRRKFGRGVYRAMPRELLLMELLGLVK 359

Query: 373 F-SR-LRCTQRGM 383
              R +  T RG+
Sbjct: 360 DTGRSIVPTSRGL 372


>gi|300118693|ref|ZP_07056421.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
 gi|298723942|gb|EFI64656.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
          Length = 181

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 8/185 (4%)

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +FY +   G L LP E+    +Y +       HG   YEISN S    ES HNL YW   
Sbjct: 1   MFYNLMNKGKLRLPGEDHEAKMYEMVMDEMEKHGYTQYEISNFSKGDNESRHNLTYWNNE 60

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
           +Y G G GAHS V     +         + +   + + G   ++   ++ +++ +E L +
Sbjct: 61  EYYGFGAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLDVHVVTEKEKMEEELFL 116

Query: 334 GLRLREGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           GLR  +G+S   ++      ++    + L   Q QG +E      +R T++G  + + V 
Sbjct: 117 GLRKTKGVSKIAFQKKFNMEMNQVFAKQLQNNQEQGLLEE-SNGYVRLTRKGKLLGNEVF 175

Query: 391 ANLAV 395
            +  +
Sbjct: 176 QSFLI 180


>gi|218506865|ref|ZP_03504743.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
          Length = 135

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 80/135 (59%), Positives = 106/135 (78%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           VHWPFC  KCPYCDFNSHVR   V QE F  +FL E   +R ++GP++++SIF GGGTPS
Sbjct: 1   VHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLNETAAVRAMSGPKTVTSIFLGGGTPS 60

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L++P+ +A ILD IA++W V + +EIT+EANPSSVE   F+GYR AGVNR+SLGVQ+L +
Sbjct: 61  LMKPETVAAILDSIARHWHVPAGIEITMEANPSSVEAERFRGYRAAGVNRVSLGVQALND 120

Query: 143 QSLRFLGRNHNASEA 157
           + L+FLGR H+ ++A
Sbjct: 121 RDLKFLGRLHDVADA 135


>gi|237737986|ref|ZP_04568467.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419866|gb|EEO34913.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 422

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 25/331 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSIS 72
                 +YVH P+C K C +C+ N   ++     +++ +   +E     Q       +  
Sbjct: 45  DDRKKAIYVHTPYCDKICSFCNLNR--KQLDGSLDSYAEYIASEFDKYGQTTYFKESTFD 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            IFFGGGTP++ +P+ + +IL  I +N  +  N E T E    ++     +   K GVNR
Sbjct: 103 VIFFGGGTPTVYKPKQLEIILQSIQRNVKLGENYEFTFETTLHNLTEEKLEVMMKYGVNR 162

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
           +S+G+Q+  E+   F  R ++ +E I  +   +N F   +  D+IY  P QT+ +   + 
Sbjct: 163 LSVGIQTFSERGRIFYNRTYSKNEVIERLKKLKNFFKGEICIDIIYNFPDQTIEEVIEDA 222

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLH 249
           +      +   S Y L + +G+   K  +   +++    +   +   +    +      +
Sbjct: 223 RIVKELELGSASFYSLMVHEGSKLSKDIEAEKVIMEEDMKKDYLLYSHFIDEMLREDKYY 282

Query: 250 AYEISNHSFLGAESLHNLNYWR----YGDYIGIGPGAHSRV-KVGSHRVAISI------E 298
             E++  +  G ++     Y +     GD   IG GA   V  +G  R+   +       
Sbjct: 283 ILELTKIAKNGGDT---YQYIQVRNSGGDTFPIGVGAGGSVQGIGVFRMNKEMSFYSKQT 339

Query: 299 KHPESWLKMVRKNGHAVVEKE----FLSSEQ 325
           ++   + K+       ++ KE     L+ E+
Sbjct: 340 EYHAKFAKLSGIMQFPIISKESIKAILNEEE 370


>gi|283955163|ref|ZP_06372665.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793376|gb|EFC32143.1| radical SAM domain protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 448

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 83/403 (20%), Positives = 171/403 (42%), Gaps = 44/403 (10%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           T +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        
Sbjct: 36  TPKQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDF 92

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           +S++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ +    ++   ++
Sbjct: 93  NSMYVGGG-TTLINEEELLKTLELCKKLFNIE---EISCESDPNHIDPSKLSMFKGI-ID 147

Query: 132 RISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           R+S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q  
Sbjct: 148 RLSCGIQSFDDETLKKIARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLL 207

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +L+ A + A   ++ Y L     +   K +   +L +  ++     Y + +        
Sbjct: 208 NDLEIAKNLAPQQITTYPLM---KSNLTKDNIAKNLGVSIKDNEFAYYLIIREF-----F 259

Query: 249 HAYEISN-HSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
             Y  SN  +F   ++  N  Y   + +Y+G+G GA S +       A     +   + K
Sbjct: 260 KDYTQSNGWNFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAK 315

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ- 365
            +++  +A + K   + ++    ++ +       I +  +      +L+ E    L    
Sbjct: 316 FIQEKQNANIAKACFNKKEIIK-YVFLTEIFSGKIEIDKFNKTLNCDLEKELFIELLGLK 374

Query: 366 --GFIERVQFSRLRCTQ--------------RGMTMLDSVIAN 392
             G I + Q + L  T                GM ++ +V  +
Sbjct: 375 MSGAIIKDQNT-LITTDFGQYLFVVLMKDFYTGMDLVRAVFRD 416


>gi|257466175|ref|ZP_05630486.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917333|ref|ZP_07913573.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691208|gb|EFS28043.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 406

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/390 (18%), Positives = 158/390 (40%), Gaps = 36/390 (9%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSIS 72
            S  L +YVH P+C   C +C+ N      +V  +N+ +    E++     +      I 
Sbjct: 39  PSGQLSLYVHTPYCDYICSFCNLNRKQGNQEV--DNYAKRLCKEIKNYGNFRFCKSSEID 96

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            IFFGGGTP++     +  IL  I  +++++ N E T E    ++         K GVNR
Sbjct: 97  VIFFGGGTPTIYSETQLENILKTIHDSFSLAENCEFTFETTLHNLSQEKIFLLTKYGVNR 156

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
           +S+G+Q+   +  + L R  +    +  +   R+ F   +  D+IY  P+QT+ +   ++
Sbjct: 157 LSIGIQTFSTRGRKLLNRRFSKEIVLKRLQEIRHSFHGTLCIDIIYNYPEQTIEELLEDV 216

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHA 250
           +      +D +S Y L IE+ +   ++ +              +L+ +        G H 
Sbjct: 217 RHISDCHIDSVSFYSLIIEEKSKLSRLFQKNPFSFQYNLQKDKELHRIFCEQMRKQGYHL 276

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIE---KHPESWLK 306
            E++          +  N ++    + IG G+  R+  +G + +   +    ++  +++K
Sbjct: 277 LELTKFVKKDKY-RYIQNNYQAKHLLPIGTGSGGRIGNIGCYHMNSKLSFYMQYSSAYMK 335

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQR 364
             +                      ++GL     IS ++ +  +G+N +    +      
Sbjct: 336 AYQ----------------------LLGLFQFPDISEENLKSFSGKNYEKIRNKMNKFVE 373

Query: 365 QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +G+        +  T  G+   +++ A + 
Sbjct: 374 KGYFSLQNHLFIY-TIEGIFWGNNIAAEIL 402


>gi|312135678|ref|YP_004003016.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775729|gb|ADQ05216.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 471

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/323 (21%), Positives = 134/323 (41%), Gaps = 25/323 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQ 64
           N +     +S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++  + + 
Sbjct: 146 NILNRLEPSSACLYIGIPICPTKCLYCSFSCHEMTRQVKSLIGMYTDSLICELEKTYHKI 205

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +I+FGGG+P+ +   NI  I   + KN  +    EIT EA  P +++    +
Sbjct: 206 EENKNKIVAIYFGGGSPATLGIDNIKRIFVNLFKNLKIEHIQEITFEAGRPDTIDEKLLK 265

Query: 124 GYRKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
              +   +   RI +  Q+  + +L+ +GRNH   +   A   A    F  ++ D+I  L
Sbjct: 266 CLSEIKKDFNLRICINPQTSNDNTLKIIGRNHTFEDIKRAFEQANEYGFKNINSDVILGL 325

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    ++  ++  L  +   ++++ L+I++ +L     K  +     E    +L + T
Sbjct: 326 PGEDENDYKNTIEDILKLSPASITIHTLSIKRASLL--RFKWNEYEFMDEETVNNLLDWT 383

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR- 285
           Q I   HG   Y            E   +   G E L+N+   +   +    G  A S+ 
Sbjct: 384 QFILEEHGYIPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKF 443

Query: 286 VKVGSHRVAISIEKHPESWLKMV 308
           V  G     +      + ++  +
Sbjct: 444 VYEGDRIERVFNPADIKLYISRI 466


>gi|254714943|ref|ZP_05176754.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
          Length = 333

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 109/324 (33%), Gaps = 24/324 (7%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  +      +  +   +E +P  +          +G+ R SLGVQS + +  + 
Sbjct: 1   EFVALMAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQSFDPKVQKA 60

Query: 148 LGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + R   A   +  +  L +N    ++FDLIY LP QT+      +  A+    +  +++ 
Sbjct: 61  INRIQTAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEMRPNRFAVFG 120

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG------ 260
                G          +  LP                   G     + + +         
Sbjct: 121 YAHVPG-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFALPDDDLSIA 179

Query: 261 -AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
             E   + N+  Y        IGIG  A  R   G H+  +     P  +   V      
Sbjct: 180 QREGRLHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYASCVASGELP 235

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECERNLQRQGFIE 369
             +   L++E +    ++  L     ++V       G + ++     +    L++ G ++
Sbjct: 236 TAKIYELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLDELEKDGLVQ 295

Query: 370 RVQFSRLRCTQRGMTMLDSVIANL 393
           R +   +R   R   ++ +V +  
Sbjct: 296 R-EGFMVRVDGRHRFIVRAVASAF 318


>gi|157364103|ref|YP_001470870.1| coproporphyrinogen dehydrogenase [Thermotoga lettingae TMO]
 gi|157314707|gb|ABV33806.1| Coproporphyrinogen dehydrogenase [Thermotoga lettingae TMO]
          Length = 409

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 76/401 (18%), Positives = 161/401 (40%), Gaps = 32/401 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           YL  Y N+   +G  S+ +Y+H PFC+K C +C  N   R      E++ +  L E+Q  
Sbjct: 25  YLHDYLNDQNLEGKKSV-IYIHVPFCLKTCTFCSMN---RSQVAPPEDYHRLILKEIQMY 80

Query: 63  RQ--LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +       +  +++FGGGTP+ +    +  I+  +  N+ ++ + EITIE + + +  +
Sbjct: 81  SKFSYIEKSTFDAVYFGGGTPTTLRSDALREIIVAVKDNFNLTPDAEITIETSVTELSDD 140

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYAL 179
             + +++ GVNR S+GVQ+  +   +   R          +  L R  F  ++ D+IY+ 
Sbjct: 141 KIELFKQTGVNRFSIGVQTFSDMGRKIFNRRGLGEWVKERLKFLKRMNFASVNIDIIYSY 200

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P Q++ +   +L+      +D  S+Y L     +   +   +   +     +     +  
Sbjct: 201 PGQSLEELRKDLRTIYELDLDGFSMYSLMNMPASKIKEEVSEETDLENFMCILKMSRDNG 260

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK 299
                   +    +    +    + +N       D + +     +          I    
Sbjct: 261 YDFLELTKM----VKRDKYKYIVNRNN-----GEDTLPL----GAGAGGNFGNALIMNPV 307

Query: 300 HPESWLKMVRK-NGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRNLDIE 357
             +++ + V+  N   VVE   +       EF+++   ++ G I +K+  +L   +    
Sbjct: 308 AIQAYEESVKNFNSRKVVEMHPI-----YKEFVILKGAIQHGKIPLKN-ALLQKNDKIKH 361

Query: 358 CERNLQRQGFIERVQFSRLRCTQRGMTMLDSV---IANLAV 395
             + L   G         L  T RG    +++   I+ + +
Sbjct: 362 FMQYLTSSGL-AVFSGDSLILTDRGFYWGNNISRRISEIVL 401


>gi|313888474|ref|ZP_07822141.1| coproporphyrinogen dehydrogenase HemZ [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845503|gb|EFR32897.1| coproporphyrinogen dehydrogenase HemZ [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 435

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/304 (20%), Positives = 127/304 (41%), Gaps = 24/304 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E+        +  VYVH PFC  +C YC F++ +   K   + + ++   ++    +L  
Sbjct: 137 EDLRLNSNLTNYNVYVHIPFCPSRCLYCSFDTTI-ENKGKMDLYTKNLTYDINSY-ELEF 194

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
            +  +SI+ GGGTP+ +  +N+  I+D +          E T+E     S+ +      +
Sbjct: 195 SKEPNSIYIGGGTPTSVGFENLEKIIDAL--INKFGKTREFTVECGRIDSLSLEILNMLK 252

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             GVNRISL  Q+  E+ +  L R  N              F  ++ DLI  LP +    
Sbjct: 253 DKGVNRISLNPQTFNEEVINKLNRVSNKDFCFWFDRARELGFETINMDLIMGLPGEDKAS 312

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +++A+ ++ ++++L+ L ++ G+  ++          +     +L   ++ +   +
Sbjct: 313 ILDSIKKAIDFSPENITLHTLALKNGSKLFENSYH------NTEDFGNLLEESKRLLMEN 366

Query: 247 GLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIGPGAHSRVKVGSHRV 293
               Y            E   ++  G  S++N+       + IG G GA +++     + 
Sbjct: 367 NYEPYYLYRQKKSVISSENIGYAKKGHASIYNIVMMEELENIIGFGLGASTKILNEKGKF 426

Query: 294 AISI 297
             ++
Sbjct: 427 ERNL 430


>gi|257065831|ref|YP_003152087.1| coproporphyrinogen III oxidase [Anaerococcus prevotii DSM 20548]
 gi|256797711|gb|ACV28366.1| Coproporphyrinogen dehydrogenase [Anaerococcus prevotii DSM 20548]
          Length = 438

 Score =  163 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 139/343 (40%), Gaps = 36/343 (10%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++ +   + +M+    +   +Y++ PFC  +C YC + + V   K   E +I S + E++
Sbjct: 108 LEDIRNLQESMSFDPQD-FSLYINIPFCPTRCKYCSYPTIVGDRKEKGE-YISSLIYEIE 165

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               +  P  + +I+ GGGTPS I+  ++  +L  I  N   S            ++   
Sbjct: 166 ---NINLPEGLDAIYIGGGTPSFIDEDDLERLLYAI--NNKFSYKEFTFEAGREDTLNTR 220

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             +  +  GV RISL  QS  ++ +   GR ++    +     A+++   ++ D I  L 
Sbjct: 221 KLEILKAGGVGRISLNPQSFNKEVVERAGRTYDYDHLLEIYQGAKDLGFIVNMDFIIGLI 280

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++   +    +   +   D+++ + L ++ G+ +++     +        ++ +  + +
Sbjct: 281 GESSELFRRNFEVLEALRPDNITFHALAMKVGSKYFEGKVKAE-----RGESLKISQMIE 335

Query: 241 SITSAHGLHAYE-------ISNHSFLGAES-----LHNLNYWRYGD-YIGIGPGAHSRVK 287
                +    Y        +SN   +G E       +N+      +  IG+G  A++++ 
Sbjct: 336 DFVEENSYKPYYLYRQKNIVSNLENIGYERGDSSQRYNIIINEEKESIIGLGMNANTKLM 395

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
            G         ++   +   V++        E  +  +  +E+
Sbjct: 396 NGKK---FRNSRNLRDYFDKVQE--------EIWAKNEMINEY 427


>gi|257452024|ref|ZP_05617323.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058573|ref|ZP_07923058.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684249|gb|EFS21084.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 406

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 75/391 (19%), Positives = 159/391 (40%), Gaps = 38/391 (9%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSIS 72
            S  L +YVH P+C   C +C+ N      ++  +N+ +    E++     +      I 
Sbjct: 39  PSGQLSLYVHTPYCDHICSFCNLNRKQGNQEI--DNYAKRLYKEIKNYGNFRFCKSSEID 96

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            IFFGGGTP++     +  IL  I  +++++ N E T E    ++         K GVNR
Sbjct: 97  VIFFGGGTPTIYSEAQLENILKTIHDSFSLAENCEFTFETTLHNLSQEKIFLLTKYGVNR 156

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
           +S+G+Q+   +  + L R  +    +  +   R+ F   +  D+IY  P+QT+ +   ++
Sbjct: 157 LSIGIQTFSTRGRKLLNRRFSKEIVLKRLQKIRHSFHGTLCIDIIYNYPEQTIEELLEDV 216

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHA 250
           +      +D +S Y L IE+ +   ++ +              +L+ +        G H 
Sbjct: 217 RHISDCHIDSVSFYSLIIEEKSKLSRLFQKNPFSFQYNLQKDKELHRIFCEQMRKQGYHL 276

Query: 251 YEISNH-SFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIE---KHPESWL 305
            E++        + + N NY      + IG G+  R+  +G + +   +    ++  +++
Sbjct: 277 LELTKFVKKDKYQYIQN-NYQA-KHLLPIGTGSGGRIGNIGCYHMNSKLSFYMQYSSAYM 334

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQ 363
           K  +                      ++GL     IS ++ +  +G+N +    +     
Sbjct: 335 KAYQ----------------------LLGLFQFPDISEENLKSFSGKNYEKIRNKMNKFV 372

Query: 364 RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +G+        +  T  G+   +++ A + 
Sbjct: 373 EKGYFSLQNHLFIY-TIEGIFWGNNIAAEIL 402


>gi|284008732|emb|CBA75428.1| oxygen-independent coproporphyrinogen III oxidase [Arsenophonus
           nasoniae]
          Length = 474

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 158/424 (37%), Gaps = 47/424 (11%)

Query: 4   LSAYENNMTG--QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ- 60
           L+++ N+M    + + ++ ++V+ P C  +C +C F + +      + + +   + ++  
Sbjct: 56  LTSFYNDMNKEIKKAENIHLWVYIPTCRYRCHFCQFPTVIVNPNTAKADSLFKEIVDLNI 115

Query: 61  -----WMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
                W++Q+      SI      GGTPSL+  + +  +++    N+  SS   +  E  
Sbjct: 116 KEATFWLKQVPNLTNVSIGEFNIFGGTPSLLPDRELKRLINFYKNNFNFSSTT-MRFEGE 174

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMS 172
           P S+        ++ G +++S G QS ++  ++  GR H A E    I  A    F  +S
Sbjct: 175 PGSLNKEYLSLLKELGFSKLSFGTQSFQDHLIKACGRKHTAEEFFKTIADANTLGFELIS 234

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK-------------GTLFYKMH 219
            DLIY L  QT+   + +++      + H+   +L +++                  K+ 
Sbjct: 235 VDLIYGLFGQTVDDVKNDMEIIKKLNISHVVCTKLHMKEFMETRTGVSGERDSLWQKKII 294

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL-------HNLNYWRY 272
            D D ++PS      + +L     +        +  +                N  Y   
Sbjct: 295 SDADKLIPSLGKQYQMRDLIDKYLAREYNEHPTMYFYKKNTYPEKWKSLITDLNKQY--- 351

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
              I IG G  S+              + + + + + K+          S++Q+      
Sbjct: 352 -PEIAIGLGGSSKSISSEMINIT----NYKQYKESIIKSQLPCHSIRGFSNDQKRINAFK 406

Query: 333 MGLRLREGISVKDWEMLA-GRNLDI-----ECERNLQRQGFIERVQFSRLRCTQRGMTML 386
           M L     +    ++    G +             LQ +  I  +  +R   T+    ++
Sbjct: 407 MALSSLIPVDDNVYKAKFDGESFFTNKTINHALTKLQLRKLI-FIDNNRFFLTKEAAILI 465

Query: 387 DSVI 390
           +S+I
Sbjct: 466 ESII 469


>gi|227500695|ref|ZP_03930744.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217282|gb|EEI82626.1| possible coproporphyrinogen dehydrogenase [Anaerococcus tetradius
           ATCC 35098]
          Length = 431

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 71/337 (21%), Positives = 146/337 (43%), Gaps = 37/337 (10%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           E +       +  VY++ PFC  +C YC + + V + +  ++ +I S + E+   + +  
Sbjct: 114 EQDKLAFDRKAFSVYINIPFCPTRCHYCSYPTLVGK-RNDKKAYIDSLIYEI---KNIDL 169

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR 126
           PR I +I+ GGGTPS I+ +++A +L  I + +T     E T EA    S++ +  Q  +
Sbjct: 170 PRKIDAIYVGGGTPSYIDHEDLARLLVAINEKFTYE---EFTFEAGREDSLDFDKLQILK 226

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           +  V+RISL  QS  E+ +R  GRN++          AR +   ++ D I  L  +    
Sbjct: 227 EGKVDRISLNPQSFNEEIVRKAGRNYDYEHFEKIYLRARQLGFIINTDFIVGLMGEGSEL 286

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +E           D+++ + L ++ G+ +++ +K         + ++++    +S    +
Sbjct: 287 FEKNFTVLKKLKPDNITFHALAMKVGSKYFEENKRAK-----RSDSLEISRKIRSFVKEN 341

Query: 247 GLHAYE-------ISNHSFLGAES-----LHNLNY-WRYGDYIGIGPGAHSRVKVGSHRV 293
              AY        +SN   +G +       +N+         IG+G  A+S++       
Sbjct: 342 SYKAYYLYRQKNIVSNLENVGYQKANTSQRYNIIINEELESIIGLGMNANSKLMNAKK-- 399

Query: 294 AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
                ++   +           +E+E  +     +E+
Sbjct: 400 -FRNSRNLRDY--------FLRLEEEIWAKNTLINEY 427


>gi|312792970|ref|YP_004025893.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180110|gb|ADQ40280.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 471

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 25/320 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQLT 66
           +    S+S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++  + +   
Sbjct: 148 LNKLESSSACLYIGIPICPTKCLYCSFSCHEITRQVKSLIGMYTDSLICELEKTYQKIEE 207

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
               I +I+FGGG+P+++  +NI  I   + +N       EIT EA  P +++    Q  
Sbjct: 208 NKNRIVAIYFGGGSPAVLGIENIKKIFTNLFENLERKHIQEITFEAGRPDTIDEKLLQYL 267

Query: 126 RKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
            +   +   R+ +  Q+  + +L+ +GRNH+  +   A   A    F  ++ D+I  LP 
Sbjct: 268 SEINQDLNVRLCINPQTSNDNTLKIIGRNHSFEDIKRAFAQAYKYSFKNINSDVILGLPG 327

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +    ++  +   L  +   ++++ L+I++ +L     K  +     E    +L + TQ 
Sbjct: 328 EDENDYKRTIDDVLKLSPASITVHTLSIKRASLL--RFKWNEYKFMDEETVNNLLDWTQY 385

Query: 242 ITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR-VK 287
           I   HG   Y            E   +   G E L+N+   +   +    G  A S+ V 
Sbjct: 386 ILEEHGYIPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKFVY 445

Query: 288 VGSHRVAISIEKHPESWLKM 307
            G     +      + ++  
Sbjct: 446 EGDRIERVFNPADIKLYISR 465


>gi|119504116|ref|ZP_01626197.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
 gi|119460119|gb|EAW41213.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2080]
          Length = 442

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 149/391 (38%), Gaps = 24/391 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-P 68
            M G     L + V+ PFC  +C  CD  + V       + ++ +  +E+  +    G  
Sbjct: 45  AMRGDFDKGLSLQVYLPFCTTRCISCDRVAEVATDSSVIDRYLNNLGSELALITDRIGRG 104

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++ +  GGGTPSL+    +AL+   I +++ + S+ E   E  P    +   +  +  
Sbjct: 105 RPLAQLHVGGGTPSLLNSSQLALLAALIDEHFYIGSDCETVFEITPDRTSLTQLELIKGL 164

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G   + + ++ +E  +   LGR+++       +  A+ + F  ++FD++Y LP QT++  
Sbjct: 165 GFRNLRIELREIESSAPLGLGRSYSPELLQDMLSNAKQVNFEAITFDVVYGLPGQTVSAV 224

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              ++     +   +       ++   F          +PS    + ++        + G
Sbjct: 225 RDGIRLITEMSPTRVLCRPFERDEQ-RFEHQRGIDSHTMPSVPEKMSMFAAIVDQLESSG 283

Query: 248 LHAYEISNHSFLG-----AESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAI 295
                I++ +        A+S   L  N   Y D      +G+G GA S +     R   
Sbjct: 284 FEWIGINSFAKPDDALSHAQSEGRLVRNRLGYSDKPTRIVLGVGLGAVSELPNLLSRNHT 343

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           S     ++W + +             ++ +     L+  L       + +++    R L 
Sbjct: 344 S----LDAWHESLDNKMSPTCAGVIFTTVEAKQRRLVHRLSETLRAPLTEFQGAEQRGL- 398

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTML 386
                 LQ +G +   +   ++ T  G   L
Sbjct: 399 ---LDQLQAEGLVT-AESEWVQVTDSGRFRL 425


>gi|261884945|ref|ZP_06008984.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 188

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 5/189 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KCPYC F SH  ++ + +  +  +  +E++    L   + IS+IF GGGT
Sbjct: 3   IYIHIPFCESKCPYCAFGSHSDKFSLTK-RYFSALKSEIK-ESILNLNKKISTIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +E    + I + I     ++ N EIT EANP+S  +      R+ GVNR+S G QS 
Sbjct: 61  PSSVEAGFYSDIFEIIK--PKLAKNCEITTEANPNSASLKWLLEMRELGVNRVSFGAQSF 118

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E+ L+ LGR H+ +    A+  A+   F  ++ DL+Y     T      E++   +  +
Sbjct: 119 NEKKLKLLGRIHSKNGISKAVQNAKIAKFNNINIDLMYGTKLDTKKLILTEVENIFNKNI 178

Query: 200 DHLSLYQLT 208
            H+S Y L 
Sbjct: 179 SHVSAYSLM 187


>gi|302872385|ref|YP_003841021.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302575244|gb|ADL43035.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 488

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/322 (21%), Positives = 133/322 (41%), Gaps = 25/322 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQ 64
           N ++    +S  +Y+  P C  +C YC F+ H   R+ K     +  S + E++  + + 
Sbjct: 163 NILSKLEPSSACLYIGIPICPTRCLYCSFSCHEMTRQVKSLIGMYTDSLICELEKTYQKI 222

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +++FGGG P++I  +NI  I   + +N       EIT EA  P +++    Q
Sbjct: 223 EENKNRIVAVYFGGGCPAVIGIENIKKIFTSLFENLEKDHIREITFEAGRPDTIDEELLQ 282

Query: 124 GYRKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
              +   +   R  +  Q+  + +L+ +GRNH   +   A   A    F  ++ D+I  L
Sbjct: 283 YLVEINQDLNVRFCINPQTSNDNTLKIIGRNHTFEDIKRAFAQAYEYGFKNINSDVILGL 342

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    +   ++  L  +   ++++ L+I++ +L     +  +    +E    +L + T
Sbjct: 343 PGEDENDYRKTIEDVLKLSPASITIHTLSIKRASLL--RFRWDEYKFMNEETVNELLDWT 400

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR- 285
           QSI    G   Y            E   +   G E L+N+   +   +    G  A S+ 
Sbjct: 401 QSILEERGYVPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKF 460

Query: 286 VKVGSHRVAISIEKHPESWLKM 307
           V  G     +      + ++  
Sbjct: 461 VYEGDKIERVFNPADIKLYISR 482


>gi|261216636|ref|ZP_05930917.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
 gi|260921725|gb|EEX88293.1| coproporphyrinogen III oxidase [Brucella ceti M13/05/1]
          Length = 328

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 108/319 (33%), Gaps = 24/319 (7%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           +  +      +  +   +E +P  +          +G+ R SLGVQS + +  + + R  
Sbjct: 1   MAALRDRLGFAGELNAAVEIDPRRMTPEMAAALAYSGITRASLGVQSFDPKVQKAINRIQ 60

Query: 153 NASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
            A   +  +  L +N    ++FDLIY LP QT+      +  A+    +  +++      
Sbjct: 61  TAKTTLETVSSLRKNNIQAINFDLIYGLPHQTVASCIETVDIAVEMRPNRFAVFGYAHVP 120

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-------AESL 264
           G          +  LP                   G     + + +           E  
Sbjct: 121 G-FKKHQRLIDEKALPDVQARHAQAAAIAERLVEAGYEQIGLDHFALPDDDLSIAQREGR 179

Query: 265 HNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            + N+  Y        IGIG  A  R   G H+  +     P  +   V        +  
Sbjct: 180 LHRNFQGYTTDACKTLIGIGASAIGRFGNGYHQNIVP----PGLYASCVASGELPTAKIY 235

Query: 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI-----ECERNLQRQGFIERVQFS 374
            L++E +    ++  L     ++V       G + ++     +    L++ G ++R +  
Sbjct: 236 ELTAEDRVRADVIEQLMCNFSVNVAAVCAAHGFDPEVLMKQNDTLDELEKDGLVQR-EGF 294

Query: 375 RLRCTQRGMTMLDSVIANL 393
            +R   R   ++ +V +  
Sbjct: 295 MVRVDGRHRFIVRAVASAF 313


>gi|222529926|ref|YP_002573808.1| coproporphyrinogen III oxidase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456773|gb|ACM61035.1| Coproporphyrinogen dehydrogenase [Caldicellulosiruptor bescii DSM
           6725]
          Length = 471

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 27/317 (8%)

Query: 17  NSLG--VYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQLTGPRS 70
           +     +Y+  P C  KC YC F+ H   R+ K     +  S + E++  + +       
Sbjct: 152 DPFSACLYIGIPICPTKCLYCSFSCHEMTRQVKSLLGMYTDSLICELEKTYQKIEENRNK 211

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
           I +I+FGGG+P+++  +NI  I   + +N       EIT EA  P +++V+  +      
Sbjct: 212 IVAIYFGGGSPAVLGIENIKKIFTNLFENLEKDHIREITFEAGRPDTIDVSLLELLADQS 271

Query: 130 ---VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMT 185
                R+ +  QS  + +L+ +GRNH   +   A  LA+   F  ++ D+I  LP +   
Sbjct: 272 KELNIRLCINPQSSNDNTLKIIGRNHTFEDIKRAFALAKEYGFKNINSDVILGLPGEDEN 331

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            ++  ++  L  +   ++++ L+I++ +L     K  +     E    +L N TQ I   
Sbjct: 332 DYKKTIEDVLKLSPASITVHTLSIKRASLL--RFKWNEYEFMDEETVNNLLNWTQYILEE 389

Query: 246 HGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHR 292
           HG   Y            E   +   G E L+N+   +   +    G  A S+      R
Sbjct: 390 HGYIPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKFVYEDDR 449

Query: 293 V-AISIEKHPESWLKMV 308
           +  I      + ++  +
Sbjct: 450 IERIFNPADIKLYISRI 466


>gi|261820811|ref|YP_003258917.1| coproporphyrinogen dehydrogenase [Pectobacterium wasabiae WPP163]
 gi|261604824|gb|ACX87310.1| Coproporphyrinogen dehydrogenase [Pectobacterium wasabiae WPP163]
          Length = 481

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/411 (17%), Positives = 155/411 (37%), Gaps = 42/411 (10%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF---------IQSFLTEMQWMRQ 64
           + +  + ++ + P C  +C +C F + +   K               I+     +Q +  
Sbjct: 68  KQAKQIHLWAYIPTCRYRCHFCQFPTVLLNPKAASAEAVFRDIVDYNIKEATMWLQNIPS 127

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L     +      GGTPSL+    +  ++D    ++  S+   +  E  P ++  N  Q 
Sbjct: 128 LAQ-AEVGEFNIFGGTPSLLPAPELRRLMDFYQSHFNFSA-ASMRFEGEPGTLTKNYLQL 185

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQT 183
            ++ G ++IS G QS  +Q +   GR H+A E I  ++ AR++    +S DLIY +  Q 
Sbjct: 186 LKELGFSKISFGAQSFNDQIIHACGRQHSAQECIETLYNARDVGFNWVSMDLIYGMLGQR 245

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKG--------------TLFYKMHKDGDLVLPSE 229
           +   + ++++AL  A+ H+   +L +E+                    +     +  P  
Sbjct: 246 VDDVKYDMEKALELALSHVVCTKLHMEEFMKTRTGVSGERESLWQKKGLIDINSMSFPGL 305

Query: 230 NVAVDLYNLTQSITSAHGLHAYEIS----NHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
            +   +  + +   + H L    +     N      + L      +Y   + IG G  S+
Sbjct: 306 GMQYQMREVVEKYLTPHYLEHPTMYFHQVNQPPEKWKGLITDLTQQY-PEVAIGLGGSSK 364

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
                       +K    +   + +N   + E    + +Q+      M L     +    
Sbjct: 365 CARAEAVNITGYKK----YKDALDQNRLPIDESRGFTPQQREVNAFKMALSTLIPVDDNI 420

Query: 346 WEMLA-GRNLDIECERN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           ++    GR+       N     L ++  +  +    +  T  G+T+++++I
Sbjct: 421 FKQRFAGRSFFDNVIINRTLNILVQKELVT-IDAGVITLTANGVTLVEAII 470


>gi|18645060|gb|AAL76361.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [uncultured marine proteobacterium]
          Length = 442

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/391 (17%), Positives = 149/391 (38%), Gaps = 24/391 (6%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-P 68
            M G     L + V+ PFC  +C  CD  + V       + ++ +  +E+  +    G  
Sbjct: 45  AMRGDFDKGLSLQVYLPFCTTRCISCDRVAEVATDSSVIDRYLNNLGSELALITDRIGRG 104

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           R ++ +  GGGTPSL+    +AL+   I +++ + S+ E   E  P    +   +  +  
Sbjct: 105 RPLAQLHVGGGTPSLLNSSQLALLAALIDEHFYIGSDCETVFEITPDRTSLTQLELIKGL 164

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G   + + ++ +E  +   LGR+++       +  A+ + F  ++FD++Y LP QT++  
Sbjct: 165 GFRNLRIELREIESSAPLGLGRSYSPELLQDMLSNAKQVNFDAITFDVVYGLPGQTVSAV 224

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              ++     +   +       ++   F          +PS    + ++        + G
Sbjct: 225 RDGIRLITEMSPTRVLCRPFERDEQ-RFEHQRGIDSHTMPSVPEKMSMFAAIVDQLESSG 283

Query: 248 LHAYEISNHSFLG-----AESLHNL--NYWRYGD-----YIGIGPGAHSRVKVGSHRVAI 295
                I++ +        A+S   L  N   Y D      +G+G GA S +     R   
Sbjct: 284 FEWIGINSFAKPDDALSHAQSEGRLVRNRLGYSDKPTRIVLGVGLGAVSELPNLLSRNHT 343

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           S     ++W + +             ++ +     L+  L       + +++    + L 
Sbjct: 344 S----LDAWHESLDNKMSPTCAGVIFTTVEAKQRRLVHRLSETLRAPLTEFQGAEQQGL- 398

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTML 386
                 LQ +G +   +   ++ T  G   L
Sbjct: 399 ---LNQLQAEGLVT-AESEWVQVTDSGRFRL 425


>gi|312127058|ref|YP_003991932.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777077|gb|ADQ06563.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 471

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/323 (21%), Positives = 133/323 (41%), Gaps = 25/323 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQ--WMRQ 64
           N ++    +S  +Y+  P C  +C YC F+ H   R+ K     +  S + E +  + + 
Sbjct: 146 NILSKLEPSSACLYIGIPICPTRCLYCSFSCHEMTRQVKSLIGMYTDSLICEFEKTYQKI 205

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +++FGGG+P+++  +NI  I   + +N       EIT EA  P +++    Q
Sbjct: 206 EENKNRIVAVYFGGGSPAVLGIENIKKIFTNLFENLEKDYIREITFEAGRPDTIDEKLLQ 265

Query: 124 GYRKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
              +   +   R+ +  Q+  + +L+ +GRNH   +   A   A    F  ++ D+I  L
Sbjct: 266 YLAEINQDLNVRLCINPQTSNDNTLKIIGRNHTFEDIKRAFAQAYEYGFKNINSDVILGL 325

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    ++  ++  L      ++++ L+I++ +L     K  +     E     L + T
Sbjct: 326 PGEGENDYKKTIEDVLKLFPASITIHTLSIKRASLL--RFKWNEYEFMDEETVNSLLDWT 383

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR- 285
           Q I   HG   Y            E   +   G E L+N+   +   +    G  A S+ 
Sbjct: 384 QYILEEHGYIPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKF 443

Query: 286 VKVGSHRVAISIEKHPESWLKMV 308
           V  G     +      + ++  +
Sbjct: 444 VYEGDRIERVFNPADIKLYISRI 466


>gi|302337649|ref|YP_003802855.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634834|gb|ADK80261.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 424

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 39/388 (10%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGG 78
           +Y+H P+C   C +C+ N    R     + + +  + E++W  +    R     +I+FGG
Sbjct: 51  IYIHIPYCDTICEFCNLN-RTARGHTDLDAYTKYLIKEIEWYARYPYIRDGQFDAIYFGG 109

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP++++ + ++L+L  +  ++ +S + EIT+E+   ++        ++ GVNR+SLGVQ
Sbjct: 110 GTPTILQTEQLSLVLRALRDSFHLSEDCEITLESTLHNLPAEKSARLQQEGVNRLSLGVQ 169

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRALSY 197
           +   +   FLGR  +A  AIA +   R +F  +   D+IY+   Q++ +   +       
Sbjct: 170 TFSSRGRSFLGRTGDAEYAIARLRAIRQLFSGVLGIDIIYSYFDQSLEEVAHDASLCSDL 229

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           ++D  S Y L I  G+   +    G++  P      D                YE+   S
Sbjct: 230 SLDGASFYSLMIHDGSSLGQRIAKGEI--PFGRSLEDDRQRHNRFYEDMHAGGYEMLELS 287

Query: 258 FLGAESLHNLNYWR----YGDYIGIGPGAHS-------RVKVGSHRVAISIEKHPESWLK 306
            L         Y R     GD + IG GA                R A  IE     + +
Sbjct: 288 KLVRPGRDEYRYIRIRYENGDVLPIGAGAGGQLAGYRIYSMAQGRRFASKIEPAYAQYHR 347

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           ++        +   LS E                +    +  L       E      R G
Sbjct: 348 VLGHLQFGCYDLTTLSEE----------------LGPDSYAPL------RERMDYFVRNG 385

Query: 367 FIERVQFSRLRCTQRGMTMLDSVIANLA 394
            +          T  G+   +++  ++ 
Sbjct: 386 MLVPETDDLYTLTADGIFWGNNIAVDIL 413


>gi|154175206|ref|YP_001409042.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           curvus 525.92]
 gi|112804027|gb|EAU01371.1| quinone-reactive Ni/Fe hydrogenase, large subunit [Campylobacter
           curvus 525.92]
          Length = 406

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 115/274 (41%), Gaps = 14/274 (5%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGG 78
           +Y H PFC   C +C  N    +     +++ Q  L E+    +      +S  S++FGG
Sbjct: 41  IYFHVPFCDTICSFCSMNR--SKLDGELDDYTQYLLGEIDKYSKFSYIQQKSFESVYFGG 98

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+ ++ +++  IL  I + + +S   E + E    ++ ++  +  +  GVNR S+GVQ
Sbjct: 99  GTPTTLKERHLEKILKAINEKFNISKTCEFSFETTLHNLNISKVRLMQSLGVNRFSIGVQ 158

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
           +  E   + L R H+   AI  +   ++ F   +  D+IY  P +T  +   + +     
Sbjct: 159 TFSEAGRKLLNRTHSKEAAIEHLKKIKDEFKGFVCTDIIYNYPNETEEEVREDARILKDI 218

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           AVD  S Y L    G++           + ++    + +     +        YE   ++
Sbjct: 219 AVDSTSFYSLQFLDGSVLSNTFSQDYYNIETDRKLHNAF-----VEEMFKGGDYEFLEYT 273

Query: 258 FLGAESLHNLNYWR----YGDYIGIGPGAHSRVK 287
            L  +      Y R      D + IG  A  ++ 
Sbjct: 274 KLNRKGRDEYKYIRLSHVGADVLPIGVSAGGQLG 307


>gi|75763929|ref|ZP_00743563.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488586|gb|EAO52168.1| Coproporphyrinogen oxidase (NAD) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 176

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
              G L LP E+    +Y +       HG + YEISN S    +S HNL YW   +Y G 
Sbjct: 1   MNKGKLRLPGEDHEAKMYEMVMDEMEKHGYNQYEISNFSKGDNKSRHNLTYWNNEEYYGF 60

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           G GAHS V     +         + +   + + G   ++   ++ +++ +E L +GLR  
Sbjct: 61  GAGAHSYVNGERIQNVGP----LKQYFNKIDETGFPYLDVHVVTEKEKMEEELFLGLRKT 116

Query: 339 EGISVKDWEMLAGRNLDIECERNL---QRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           +G+S   ++      +D    + L   Q QG +E      +R T++G  + + V  +  +
Sbjct: 117 KGVSKIAFQKKFNMEMDQVFAKQLQNNQEQGLLEESD-GYVRLTRKGKLLGNEVFQSFLI 175


>gi|332361346|gb|EGJ39150.1| coproporphyrinogen dehydrogenase [Streptococcus sanguinis SK1056]
          Length = 178

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 9/183 (4%)

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDY 275
               + G L LP E++  +++    +     G   YEISN S  G ES HNL YW   +Y
Sbjct: 1   MNRMRRGKLPLPKEDLEAEMFEYIIAELEKAGFEHYEISNFSKPGFESRHNLMYWDNAEY 60

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
            GIG GA   V    ++    I      +L+ V   G+A V++E L+  ++ +E + +GL
Sbjct: 61  YGIGAGASGYVDGVRYKNHGPI----RHYLQAVEA-GNARVQEEALTLNEKMEEEMFLGL 115

Query: 336 RLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           R + G+S K +E   G + + +       L  QG +       +R T++G+ + D+V   
Sbjct: 116 RKKSGVSKKRFEEKFGLSFEDQYGVVVSELTEQGLLV-TDRDIVRMTKQGLFLGDTVAEK 174

Query: 393 LAV 395
             +
Sbjct: 175 FIL 177


>gi|167567919|ref|ZP_02360835.1| hypothetical protein BoklE_35543 [Burkholderia oklahomensis EO147]
 gi|167573205|ref|ZP_02366079.1| hypothetical protein BoklC_25438 [Burkholderia oklahomensis C6786]
          Length = 480

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 84/433 (19%), Positives = 164/433 (37%), Gaps = 60/433 (13%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFL 56
           +++ + +  + GQ  N   ++   P C   C +C F   +R++          N++   +
Sbjct: 59  RFIQSLQAELEGQ--NPYFLWATIPLCKYHCYFCQFPIVMRKHDAAAFREQARNWVDLNI 116

Query: 57  TEMQWMRQL---TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            E +    L        +      GGTP+L+  + +A +LD    N+  +++  I IE +
Sbjct: 117 AEARLWLALVPALRDAPVGEFCLFGGTPTLLPDELLAELLDFYRSNFGFNADTTIRIEGS 176

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMS 172
           P S+  +      K G  +I+ G+QS +++ +   GR H + EA A +  A  + F R+ 
Sbjct: 177 PDSLSSDKLALLHKKGCRKITYGIQSFDDRLVALAGREHTSDEARAVVRHAFLSGFERVD 236

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK----GTLFYKMHKDGD----- 223
            DLIY L  Q +  +  ++++ L      + + +L +      GT    +          
Sbjct: 237 GDLIYGLLDQRVEGFCHDVRQMLELDYSTVVMTKLHLRPFGETGTAIAGVPARWQSPASR 296

Query: 224 -------LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR----Y 272
                     PS      +     ++    GL  Y                  W+     
Sbjct: 297 ARASREGHRWPSLGEQYQMREAAVALLEDAGLFEYPTMYFQKPETGC----GRWKSLVLD 352

Query: 273 GD----YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQAD 328
            D     +GIG GA S     + R + ++   P ++L  +      +   E L  E   D
Sbjct: 353 QDKQFVEVGIGLGASS----ATRRCSANVATRPGAYLDAIASGELPL---ELL--EMSPD 403

Query: 329 EFLMMGLR--------LREGISVKDWE--MLAGRNLDIECERNLQRQGFIE-RVQFSRLR 377
           E +   LR        LR+ +    +    L  +       ++L+R+G    R     + 
Sbjct: 404 EEVASSLRRALTTCQPLRDDLHRARFAGGSLFDQRWKPVF-QSLERRGLAAIRPDEGTVE 462

Query: 378 CTQRGMTMLDSVI 390
            T  G T++++++
Sbjct: 463 LTGVGKTLVEAIV 475


>gi|168187216|ref|ZP_02621851.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
 gi|169294870|gb|EDS77003.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
          Length = 414

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 85/389 (21%), Positives = 156/389 (40%), Gaps = 41/389 (10%)

Query: 7   YENNMTGQGS---NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + N++ G+        GVYVH PFC   CP+C +N  V+  K     + ++ + E+    
Sbjct: 19  FTNDVVGETELSMKEFGVYVHIPFCKTLCPFCPYNK-VKYDKKLAFKYKKALINEINLAG 77

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           +  G ++I+SI+FGGGTP+L+  +++  I++ I +N+ V     I IE +P+ +  +   
Sbjct: 78  KKHGEKNITSIYFGGGTPALM-LESLGEIVETIKQNFKV--KCNIGIELHPTDINEDMLG 134

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
             +  G N IS+G+QS  ++ L  L R + + +  +  +  A   F  +  DLI+ +  Q
Sbjct: 135 KLKDIGFNMISVGIQSFNKKCLDNLEREYIDGASKVKLVKEA--GFKVVDVDLIFGIKDQ 192

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              Q + +   A +     +S Y                 D    +           +  
Sbjct: 193 DEEQIKNDFYTAFNVGATQVSTYPFI--------------DFSYANNKNKPLNRKKKKKF 238

Query: 243 TSAHGLHAYEI-----SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
                  + +I     S  +F G  ++   +      YIG GP A +           S+
Sbjct: 239 LECINKISSDIDCDRTSVWTF-GKNNIDKYSSITRDKYIGFGPSAATLTSREFKINTFSV 297

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
               E ++K       A       S   +A  +L       + +S + +  L   NL   
Sbjct: 298 ----EEYIKCTNSGKKATALTMKFSKRTRALYWLFWNAYTLK-LSNEKFYELFNVNLKEF 352

Query: 358 CERNLQRQG----FIERVQFSRLRCTQRG 382
            +  L + G     I++V    +  T+RG
Sbjct: 353 FKLEL-KIGEMFKLIKKVPEGYI-LTKRG 379


>gi|124027245|ref|YP_001012565.1| oxygen-independent coproporphyrinogen III oxidase [Hyperthermus
           butylicus DSM 5456]
 gi|123977939|gb|ABM80220.1| Oxygen-independent coproporphyrinogen III oxidase [Hyperthermus
           butylicus DSM 5456]
          Length = 435

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 85/358 (23%), Positives = 144/358 (40%), Gaps = 18/358 (5%)

Query: 13  GQGSNSLGVYVHWPFCVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
              S    +Y+H PFC +  C +C F  +    K     +I + L E+ W+        I
Sbjct: 52  RSASGHYALYIHMPFCHRPLCTFCCFVRYPFHEK-RHREYIDALLQEISWLASTAEGAHI 110

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +++ GGGTPS+ +  ++A ++D + +       V+++ EANP  +        R AGV+
Sbjct: 111 ETLYIGGGTPSI-DVYSLARVIDAVREA--FGGKVQVSTEANPRDLTDEAVSVLRSAGVS 167

Query: 132 RISLGVQSLEEQSLRFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R+S+GVQ+LE++ L  LGR N+   +   A+ L +  F  ++ D+I+ +   T      E
Sbjct: 168 RLSIGVQALEQKRLLELGRLNNTVEDVYRAVDLVKGKFETVNIDIIWGIRSDTPAVVARE 227

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             RALS  VD ++ Y L    G    +  +      P        + L   I        
Sbjct: 228 AARALSLPVDQVTFYPLMPAPGLRELEKKRREGPWHP------LEHRLYGVILGEALSRG 281

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
           +  +    +   S     Y   Y  ++ +G     RV    +    S+EK    + ++VR
Sbjct: 282 FRPATPWCMDRGSRLIDEYVVDYDKFLALGISGIGRVGSYVYVNTFSLEK----YSRLVR 337

Query: 310 KNGHAVVEKEFLSSE-QQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQG 366
           + G   V    +S+              LR      D   L G  L       L+  G
Sbjct: 338 ERGFPTVIGSMVSTNSDMLYYSFTAAFGLRWPPPRIDLYGLRGYLLASTGSAVLKLLG 395


>gi|315931558|gb|EFV10524.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 340

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 69/305 (22%), Positives = 139/305 (45%), Gaps = 23/305 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        SS
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKD--KGFDFSS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI  + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLINEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q+  Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSFLGAESLHNLNY-WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
            + +  SF   ++  N  Y   + +Y+G+G GA S +       A     +   + K ++
Sbjct: 264 -QNNGWSFSLEKNKLNDEYVSSHHEYLGVGSGAFSFLDGELLINAF----NLNDYAKFIQ 318

Query: 310 KNGHA 314
           +  +A
Sbjct: 319 EKQNA 323


>gi|315282377|ref|ZP_07870801.1| coproporphyrinogen dehydrogenase [Listeria marthii FSL S4-120]
 gi|313613979|gb|EFR87699.1| coproporphyrinogen dehydrogenase [Listeria marthii FSL S4-120]
          Length = 171

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 89/175 (50%), Gaps = 8/175 (4%)

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
            L LP ++   ++Y+L  +    HG   YEISN +  G +S HN+ YW    Y G G GA
Sbjct: 2   KLFLPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGA 61

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
           H  V    +     I+K    +++ +++N     +++ ++ +++ +E + +GLR  +G++
Sbjct: 62  HGYVGDTRYSNFGPIKK----YMEPLQENKLPTFQQKEITLKEKMEEEMFLGLRKVDGVN 117

Query: 343 VKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              ++   G++LD      +Q+   +G++E  + + +  T+ G  + ++V     
Sbjct: 118 KSHFKQKFGQDLDTTFAHAIQKTMAKGWLENNEEN-VALTRSGRFLGNNVFQEFL 171


>gi|150015571|ref|YP_001307825.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902036|gb|ABR32869.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 436

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 160/407 (39%), Gaps = 37/407 (9%)

Query: 1   MKYLSAYENNMTGQGS-NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +K  +A+ + +  + +     +YVH PFC  KC +C F+      ++ +  +    + E+
Sbjct: 26  LKKENAFFSELDNKSTIREASIYVHIPFCDSKCAFCGFDKVKNTNEIPK--YKDRIIEEI 83

Query: 60  QWMR--QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +     +      ++ I  GGGTP+++       IL+ I + + V+ ++ + IE + +++
Sbjct: 84  ENYASKEYIKNLRVNVIHIGGGTPTILPKDVFNEILNTIKEKFNVTDDLIVNIEGSATTI 143

Query: 118 -EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
            +    +  ++  ++++S+GVQ+  ++            E    +   ++       D++
Sbjct: 144 YKDEVIEYIKENNISKVSVGVQTFNQKLRDQYKSKATLDEVYLTLSKLKSNNITTGIDIM 203

Query: 177 YALPKQTMTQWEM----ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           Y  P   +   +     +++ A+   VD +   Q+         K  +D  L  P+    
Sbjct: 204 YGFPDFKIGDVKEITFNDIREAIRLGVDAIDFGQMYPFCNN-LEKRVEDEKLGFPNLEEL 262

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYWRYGDYIGIGPGA 282
           VD+      +    G        ++    +           +HN+      D I +G GA
Sbjct: 263 VDIITTVNKMMEEAGYEQKASYGYTKKDKDILVMETAYYGGIHNVP-----DCIALGSGA 317

Query: 283 HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGIS 342
              +    +R          S+   +        + + L+  Q  +  ++   +L   +S
Sbjct: 318 FGFINGYKYRNN--------SYNSYINGGSTRFSQLKKLTENQLENLNIVGFPKLLF-LS 368

Query: 343 VKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
            +      G   + +  + L  QG +E  +++  + T++G   +D++
Sbjct: 369 KQQLAQNGGAKYEGKI-KELLNQGLLEEDEYA-FKITEKGKCFIDNI 413


>gi|331270242|ref|YP_004396734.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum BKT015925]
 gi|329126792|gb|AEB76737.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium botulinum BKT015925]
          Length = 397

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 77/369 (20%), Positives = 147/369 (39%), Gaps = 24/369 (6%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N  G+Y+H PFC   C +C +N      ++    + ++ ++E++   +  G ++I+S++F
Sbjct: 15  NEFGIYIHIPFCTTLCSFCPYNKEKYNEQLA-SKYKEALISEIEMAGKSHGRKNITSVYF 73

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           GGGTP+L+  +++  I+  + KN+  + N  I IE +P  ++       +  G + IS+G
Sbjct: 74  GGGTPALM-LEDLEDIISILKKNF--NLNNNIGIELHPRDIDKYCLTKLKNIGFDMISIG 130

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS  ++ L  LGR +   E    + L     F  +  DLI+ +  Q+  +       A 
Sbjct: 131 IQSFNKKCLESLGREYVYGE--DKVKLVSEAGFKVIDVDLIFGIKGQSREELREYFLAAF 188

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                 +S Y                                L   I +       E ++
Sbjct: 189 KSGATQVSTYPFIDFSYANNKNKPLGRKDKR----------ELLDCINTISNDIYCERTS 238

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
               G +++   +      YIG GP A +  K        S+    + ++K V+ N  A 
Sbjct: 239 VWTFGKKNVSKYSSITRDLYIGFGPSAATLTKDVFKVNTFSV----KEYIKSVKDNEKAT 294

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ--F 373
                 +   +A  +L       + +S K++  L   NL+       +   F+  V+   
Sbjct: 295 AITMKFNKRTRALYWLFWNAYTLK-LSNKEFSKLFNINLEEFFGVEFKIGEFLRLVKKVN 353

Query: 374 SRLRCTQRG 382
                T+RG
Sbjct: 354 DGYVLTKRG 362


>gi|312876436|ref|ZP_07736420.1| Coproporphyrinogen dehydrogenase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796794|gb|EFR13139.1| Coproporphyrinogen dehydrogenase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 471

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 132/320 (41%), Gaps = 25/320 (7%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEM--QWMRQLT 66
           +     +S  +Y+  P C  KC YC F+ H   R+ K     +  S + E+   + +   
Sbjct: 148 LNKLEPSSACLYIGIPICPTKCLYCSFSCHEITRQVKSLIGMYTDSLICELGKTYQKIEE 207

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
               I +I+FGGG+P+++  +NI  I   + +N       EIT EA  P +++    Q  
Sbjct: 208 NKNRIVAIYFGGGSPAVLGKENIKKIFTNLFENLEKKHIQEITFEAGRPDTIDEKILQYL 267

Query: 126 RKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPK 181
            +   +   R+ +  Q+  + +L+ +GRNH+  +   A   A    F  ++ D+I  LP 
Sbjct: 268 SEINQDLNVRLCINPQTSNDNTLKIIGRNHSFEDIKRAFAQAYKYSFKNINSDVILGLPG 327

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +    ++  +   L  +   ++++ L+I++ +L     K  +     E    +L + TQ 
Sbjct: 328 EDENDYKRTIDDVLKLSPASITVHTLSIKRASLL--RFKWNEYKFMDEETVNNLLDWTQY 385

Query: 242 ITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR-VK 287
           I   HG   Y            E   +   G E L+N+   +   +    G  A S+ V 
Sbjct: 386 ILEEHGYIPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKFVY 445

Query: 288 VGSHRVAISIEKHPESWLKM 307
            G     +      + ++  
Sbjct: 446 EGDRIERVFNPADIKLYISR 465


>gi|186474671|ref|YP_001863642.1| coproporphyrinogen dehydrogenase [Burkholderia phymatum STM815]
 gi|184198630|gb|ACC76592.1| Coproporphyrinogen dehydrogenase [Burkholderia phymatum STM815]
          Length = 479

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 160/429 (37%), Gaps = 56/429 (13%)

Query: 4   LSAYENNMTG--QGSNSLGVYVHWPFCVKKCPYCDFNS-----HVRRYKVGQENFIQSFL 56
           L+A+ ++M    + +N + ++ + P C  +C +C + +          +    + +   +
Sbjct: 56  LAAFLDDMERDIKQANQIHLWSYIPTCRYRCHFCQYPTLILNPQATSSQAVFRDLVDYNI 115

Query: 57  TEMQWMRQ---LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            E     Q         +      GGTPSL+    +  ++D    ++ +S    +  E  
Sbjct: 116 KEATMWLQNVPCLAQAEVGEFNIFGGTPSLLPEPELRRLMDFYQGHFNLS-VATMRFEGE 174

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMS 172
           P ++     +  ++ G  +IS G Q+  ++ +   GR H+A + + AI  AR I F  ++
Sbjct: 175 PGTLTKQYLRLLKELGFTKISFGAQAFNDRIISACGRMHSAEQCLDAIFNAREIGFDWVN 234

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI------------EKGTLFYK--M 218
            DLIY +  Q +   + ++++ L   + H+   +L +            E+ +L+ K  +
Sbjct: 235 VDLIYGMLGQNVDDVKYDIEKTLELELSHVVCTKLHMENFLKKRTSVSGERESLWQKKGL 294

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHA---YEISNHSFLGAESLHNLNYWRY--- 272
               ++  P       + +L +   S+  +     Y   NH             W+    
Sbjct: 295 INIRNMNFPGLGKQYQMRDLIEQYLSSGYVEHPTTYFHQNHLHPEK--------WKGLVT 346

Query: 273 ---GDY--IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
                Y  + IG G  S+             K    +   + +N   + E   +S  Q+ 
Sbjct: 347 DLDKQYPEVAIGLGGSSKCARAEAINVTGYRK----YKAALDENRLPIEESRGVSPLQRE 402

Query: 328 DEFLMMGLRLREGISVKDWEMLA-GRNLDI-----ECERNLQRQGFIERVQFSRLRCTQR 381
                M L     ++   +     GR+           R L  +  +  +    +  T  
Sbjct: 403 VNAFKMALSTLVPVNDNVFGRRFDGRSFFDNPIIRSTLRTLVDKALV-IIDSDVVTLTPN 461

Query: 382 GMTMLDSVI 390
           G+T++++VI
Sbjct: 462 GVTLVEAVI 470


>gi|111224661|ref|YP_715455.1| oxygen-independent coproporphyrinogen III oxidase [Frankia alni
           ACN14a]
 gi|111152193|emb|CAJ63923.1| hypothetical protein; putative oxygen-independent
           coproporphyrinogen III oxidase [Frankia alni ACN14a]
          Length = 484

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 141/429 (32%), Gaps = 50/429 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK-----VGQENFIQSFL 56
           ++L+   + +       + ++ + P C  +C +C + + +   +          ++   +
Sbjct: 62  RFLADLADQLADTA--PIHLWSYIPTCSYRCRFCQYPTVLIAGEPAVAADRAARWVDLNI 119

Query: 57  TEMQWMRQL---TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            E +             +      GGTPSL+    I  +L    +++  + +  I  E +
Sbjct: 120 AEARLWLDRVPTLAAAPVGEFNVFGGTPSLLPASAIRRLLGFYREHFGFTPDTAIRFEGD 179

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMS 172
           PSS+     +   + GV ++S GVQS +++ L   GR H  +  +  +  A+   F  +S
Sbjct: 180 PSSLTAEKLETLAELGVTKLSCGVQSFDDRVLAQSGRPHTGARCVEFVRDAQRLGFAWIS 239

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL-----------------F 215
            DL+Y L  QT+     +L   +   +  +   +L +                      +
Sbjct: 240 VDLMYGLLDQTVDSVRRDLAVVVDTGLTAVVCTKLHLRPYAETRTGVAGERPAAWQIPAY 299

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW----- 270
                      P+      +  +        G   +     +  G         W     
Sbjct: 300 RDRLAAEGHRWPTLGEQYQMREVLTDGLVDAGYVEHPTMYFARAGLGP----ETWKSIMV 355

Query: 271 ---RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
              R    + IG G  S  +       ++  +    +   V      +      S   + 
Sbjct: 356 DQDRQEAEVAIGLGGSSSCRTSEAITEVAWGR----YAAAVESGRLPLASATSFSPAARE 411

Query: 328 DEFLMMGLRLREGISVKDWEMLA-GRNLDIE----CERNLQRQGFIERVQ-FSRLRCTQR 381
              + M L   + +  +       G  L  E      R L  +G +   +    +  T+ 
Sbjct: 412 ARAIRMALSTLQPLRDRLHRARFPGSCLLDEPWLGRFRALAERGLVGVDEAAGTVTLTRD 471

Query: 382 GMTMLDSVI 390
           G T+++++I
Sbjct: 472 GRTLVEAII 480


>gi|163785362|ref|ZP_02179995.1| coproporphyrinogen III oxidase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879370|gb|EDP73241.1| coproporphyrinogen III oxidase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 303

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 103/295 (34%), Gaps = 29/295 (9%)

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYA 178
           +     R+ G NR+S G+Q    +    + R          +   R   F  ++ DLIY 
Sbjct: 1   DRIFLLREIGFNRVSFGIQDFNPKVQEAVNRIQPEEMIFNVMSWIREAGFESVNIDLIYG 60

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYN 237
           LP QT+  +   + + +    D ++ +           ++ +  D   LP     +D+  
Sbjct: 61  LPYQTLETFSETIDKVIKLNPDRIANFNYAHVP--WLKRLQRMIDESALPPPQEKLDILK 118

Query: 238 LTQSITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRY-----GDYIGIGPGAHS 284
           +T    +  G     + + +    E        +LH  N+  Y      + IG G  + S
Sbjct: 119 MTIEKLTNAGYLFIGMDHFAKPDDELAVAQRERTLHR-NFQGYTTHAEAELIGFGATSIS 177

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
            +    +       K  + +  M+ +    +     L+ +      ++M L     +   
Sbjct: 178 ML----YDAYAQNHKKLKDYYGMIDEGKLPIERGVILNQDDIIRRDVIMRLMSHFQLYKG 233

Query: 345 DWEMLAGRNLDIECE------RNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           + E   G + D          + L++ G I ++   R+  T  G  ++ ++    
Sbjct: 234 EIEEKYGIDFDTYFASEMEELKELEKDGLI-KIYPDRIDVTPAGRLLIRNIAVTF 287


>gi|327188958|gb|EGE56149.1| coproporphyrinogen III oxidase [Rhizobium etli CNPAF512]
          Length = 362

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 125/342 (36%), Gaps = 23/342 (6%)

Query: 55  FLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
              E++ +  Q+    S+  + FGGG+P+++   +   +++ +   + +     I +E +
Sbjct: 2   LREEIRLVAEQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFAIERGATIAVEVD 61

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMS 172
           P +   +  +   + GVNR S+GVQS +    + + R  + ++ + A+   R     R++
Sbjct: 62  PRTFTTDMAEALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRIN 121

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL++ LP QT+         A++   D L+++  +    +            LP     
Sbjct: 122 FDLMFGLPNQTVQSCLESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAAR 180

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFL----------GAESLHNLNY--WRYGDYIGIGP 280
            +  +       A G     + + +            G    ++L Y        IG+G 
Sbjct: 181 AEQASAMADTLVAAGYLQIGLDHFALPDDELAIAQRAGRLRRNSLGYSAETCSTVIGLGA 240

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG 340
            A  R   G  +  ++       + + +     A+     L++E +    ++  L     
Sbjct: 241 SAIGRCGDGYVQNDLT----QSCYNRHIASGRLAISRGYRLTTEDRVRAAIIEQLMCYLE 296

Query: 341 ISVKDW--EMLAGRNLDIECERNLQ--RQGFIERVQFSRLRC 378
             +          +   +   + L+   +  I       +R 
Sbjct: 297 ADISAICTAQGFDQTHLVSSAKQLEILAEDGIVEFDNGLVRV 338


>gi|154148911|ref|YP_001405668.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
 gi|153804920|gb|ABS51927.1| coproporphyrinogen III oxidase [Campylobacter hominis ATCC BAA-381]
          Length = 424

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 76/358 (21%), Positives = 151/358 (42%), Gaps = 30/358 (8%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y H PFC   CPYC F+    + ++ +E + ++   EM  + +L       S++ GGG 
Sbjct: 40  LYAHVPFCHTFCPYCSFHKFYYQSELCKE-YFKNLRLEMTQIARL--GFKFDSLYVGGG- 95

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            +LI+   +   L+   K + +    EI+ E++P+ ++  N   ++   +NR+S+GVQS 
Sbjct: 96  TTLIDEDELIKTLELAKKLFNID---EISCESDPNHIDAQNLARFKGL-INRLSVGVQSF 151

Query: 141 EEQSLRFLGRNHNA---SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            ++ L+ +GR          +  +  A  I P  S DLI+  P Q+   +  ++++A S 
Sbjct: 152 NDEILKKVGRFDKFGGSEVLLEKLSKAIGILPTFSLDLIFNFPFQSELDFREDIKKAKSI 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D  + Y L     +   +      L + S++     Y + +           + +  S
Sbjct: 212 GADQYTFYPLM---KSPLMRDKIAKSLGVSSKDNEEKFYKIIRE----SFRDFAKNNAWS 264

Query: 258 FLGAESLHNLNYW-RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           F   E      Y     ++IGIG GA S +       A         +  +V+    AV+
Sbjct: 265 FSKKEQNLKDEYIGENNEFIGIGSGAFSFLDGTLFVNAF----DLNDYSGLVKCEKSAVI 320

Query: 317 EK-EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF 373
            + EF   + Q  ++L +       I++  ++         E  + L+ +  + ++  
Sbjct: 321 AQCEF--DKMQKIKYLFLNELFNGEINIAKFDAKN----SCEILKVLRNEILLLKLSG 372


>gi|242001348|ref|XP_002435317.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
 gi|215498647|gb|EEC08141.1| coproporphyrinigen III oxidase, putative [Ixodes scapularis]
          Length = 177

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           WP+C K+C YC+FN +V +  V     ++  + E   + +L G   +SS+FFGGGTPSL+
Sbjct: 1   WPYCEKRCTYCNFNKYVSQN-VDHTGMMECLIREFTTIVELAGISQVSSVFFGGGTPSLM 59

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P +I  +L  ++        +E+T+E NP+       + +++AGV+R+S+G+Q L+++ 
Sbjct: 60  RPADIERLLGVVSSLSP-DPGLEVTLECNPTPAARQTLRDFKRAGVSRVSVGIQCLQDEE 118

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  LGR H + +A+  +  A  +FP R+S D++Y  P Q + QW  EL+        HL
Sbjct: 119 LSRLGRTHTSKDALRCVEEAECLFPGRVSVDVLYGRPGQDLQQWLRELELVRVLNAPHL 177


>gi|3913809|sp|O31067|HEMN_THEVL RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|2598960|gb|AAB84028.1| oxygen independent coproporphyrinogen III oxidase
           [Thermosynechococcus vulcanus]
          Length = 325

 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 109/310 (35%), Gaps = 26/310 (8%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           ++ + EI+IE +P  +  + F   RK G NRIS GVQ  + Q    + R    +     +
Sbjct: 4   MTKDAEISIEVSPRYINGDYFLRGRKLGFNRISFGVQDFDPQVQLAVNRVQRETMFFQVM 63

Query: 162 HLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
              R   F  ++ DLIY LP QT+  +E  + + L    D ++++           +   
Sbjct: 64  EWIRAAEFESVNIDLIYGLPYQTVQSFEATIAKTLRLDPDRIAVFNFAYLPNLKPIQKRI 123

Query: 221 DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE----------SLHNLNYW 270
           D    LP     + +        ++ G     + + +    E            +   Y 
Sbjct: 124 DP-TTLPDSATKLTILQRVIERLTSQGYRYIGMDHFAKPTDELAIAQRSGDLKRNFQGYT 182

Query: 271 RY--GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFL-SSEQQA 327
                D IG G  + S ++    +     +KH  ++   V    H   E  F  + E   
Sbjct: 183 TLPTADLIGFGLTSISMLQAAYAQN----QKHLATYFSDVAAGHHGPQECGFNCTVEDLL 238

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQR 381
              ++M L  +  +           + D          R L   G +   +  RL  T  
Sbjct: 239 RRTIIMELMCQFSLDKGAIARQFNLDFDAYFASELAALRELAADGLLHLGR-DRLEVTPV 297

Query: 382 GMTMLDSVIA 391
           G  ++ ++ A
Sbjct: 298 GRLLIRNITA 307


>gi|329577057|gb|EGG58530.1| coproporphyrinogen dehydrogenase domain protein [Enterococcus
           faecalis TX1467]
          Length = 184

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 8/185 (4%)

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYG 273
           +F    + G L LP E +   +++ T       G H YE+SN +  G ES HNL YW   
Sbjct: 1   MFMNWFRQGRLQLPEEEIEAQMFDETIEAMEKKGRHQYEVSNFALTGKESQHNLAYWNND 60

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMM 333
            Y G G GA   +    ++    I    + +LK +R+N   +VE E L+   Q +E L +
Sbjct: 61  HYYGFGAGASGYLGQTRYKNHGPI----QHYLKPLRENQLPIVETEELTRLNQIEEELFL 116

Query: 334 GLRLREGISVKDWEMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
           GLR + GIS + ++      ++    E  + L ++  +   +   LR T++G+ + ++V 
Sbjct: 117 GLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIKEELLIE-EADILRLTKKGLFVGNNVF 175

Query: 391 ANLAV 395
               +
Sbjct: 176 EAFLL 180


>gi|312621841|ref|YP_004023454.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202308|gb|ADQ45635.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 471

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 133/323 (41%), Gaps = 25/323 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLT 66
           N +     +S  +Y+  P C  KC YC F+ H   R+ K     +  S + E++   Q  
Sbjct: 146 NILNKLEPSSACLYIGIPICPTKCLYCSFSCHEMTRQIKSLLGMYTDSIICELEKTYQKI 205

Query: 67  GPRS--ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
                 I +I+FGGG+P+++  +NI  I   +  N   +   EIT EA  P ++  +  +
Sbjct: 206 DENKNRIVAIYFGGGSPAVLGIENIKKIFTNLFDNLEKNCIQEITFEAGRPDTISEDLLE 265

Query: 124 GYRKAG---VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYAL 179
              +       R+ +  Q+  + +L+ +GRNH   +   A  L +   F  ++ D+I  L
Sbjct: 266 YLAELNRYLNIRLCINPQTSNDNTLKIIGRNHTFEDIKKAFALTQEYGFNNINSDVILGL 325

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +    ++  +   L  +   ++++ L+I++ +L     K  +     E    +L + T
Sbjct: 326 PGENENDYKKTIDDVLKLSPASITVHTLSIKRASLL--RFKWNEYKFMDEETVNNLLDWT 383

Query: 240 QSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRYG-DYIGIGPGAHSR- 285
           Q +   HG   Y            E   +   G E L+N+   +   +    G  A S+ 
Sbjct: 384 QYVLEEHGYIPYYMYRQKNMIGNFENVGYCKRGFEGLYNVMIMQEKHNIYACGAKAVSKF 443

Query: 286 VKVGSHRVAISIEKHPESWLKMV 308
           V  G     +      + ++  +
Sbjct: 444 VYEGDRIERVFNPADIKLYISRI 466


>gi|224438267|ref|ZP_03659194.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313144705|ref|ZP_07806898.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           cinaedi CCUG 18818]
 gi|313129736|gb|EFR47353.1| oxygen-independent coproporphyrinogen III oxidase [Helicobacter
           cinaedi CCUG 18818]
          Length = 191

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 3/190 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS V R     E ++++   ++    +    +SI+SIFFGGGT
Sbjct: 3   LYIHIPFCSSKCGYCAFNSFVDREGE-IEAYVRALREDIHHSLR-GNTQSITSIFFGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ ++ +    I + I  N  V+ + EI++E N + + +   +     G NR+S+G+QS 
Sbjct: 61  PNFLDSKYYEKIFESIYTNANVARDCEISLECNVNLLNLAWCKDLLSLGANRLSIGIQSF 120

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            E  L FL R H A +    +  A +  F  +S D+I   P  +    E ++   L   +
Sbjct: 121 NENKLAFLQREHKAKDIALNVEYAFSVGFKNLSCDIITNTPLDSKKVVEADITNTLKLPI 180

Query: 200 DHLSLYQLTI 209
            H+S+Y L+I
Sbjct: 181 SHISIYGLSI 190


>gi|315930179|gb|EFV09300.1| oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 331

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/317 (19%), Positives = 122/317 (38%), Gaps = 27/317 (8%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           IL   +     S + EI+ E +P  +         + G NRIS GVQ  +E+  + + R 
Sbjct: 1   ILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFNRISFGVQDFDEKVQKEIHRI 60

Query: 152 HNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            +      A++L RN     ++ DLIY LP Q +  +   L++ +    D L+++     
Sbjct: 61  QSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFTQTLEKVMLLNPDRLAIFNYAHV 120

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE---SLHN- 266
              L   M K  +  LPS +V +++    +   S +G     + + +    E   +L N 
Sbjct: 121 P-WLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNGYKMIGMDHFAKENDELFKALENG 179

Query: 267 ---LNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               N+  Y      D +GIG  +         R      K   S+   + +        
Sbjct: 180 TLHRNFQGYTTKGGADLVGIGLTSIG----EGQRHYAQNFKDMSSYEAALDRGALPFERG 235

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER------VQ 372
             LS + +  + ++M L     + +K  E     +     + +L+    +E         
Sbjct: 236 VALSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFKEYFKEDLKA---LEEYKDFVNFD 292

Query: 373 FSRLRCTQRGMTMLDSV 389
            + ++  + G+ ++ ++
Sbjct: 293 ENFIKVNETGVLLIRNI 309


>gi|119477014|ref|ZP_01617295.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
 gi|119449821|gb|EAW31058.1| coproporphyrinogen III oxidase [marine gamma proteobacterium
           HTCC2143]
          Length = 457

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 142/397 (35%), Gaps = 32/397 (8%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSIS 72
           Q    L + V+ PFC   C  C  N  +         ++     E++   +L    R++ 
Sbjct: 61  QNIAPLSILVNVPFCRHHCQTCVNNKIMAWDHSAIRKYLDYLSKEIRMQAKLVNKHRTVL 120

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGV 130
            +    GT + ++   +  ++  +A ++ ++     E ++E +  +V ++N    +  G 
Sbjct: 121 KLQIDRGTAAFLKGAELTELMHNLACHYKLTDSERREYSVELDFRTVTLDNLALLKGLGF 180

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWE 188
           N++S+G+Q  ++   +   + H     I     A     F  +S+DL++  P QT+    
Sbjct: 181 NQLSVGIQGFDDHV-KIENKLHKRFNIIKTWMTAARVYGFKSISYDLVFGHPSQTLMSLG 239

Query: 189 MELQRALSYAVDHLSL--YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             L + +  + D +    Y  ++E+     K  + G   L   +  V +  L     +  
Sbjct: 240 TTLDKMIELSPDRMYFFHYSQSLEEP---EKKVEIGQKKLLVADKKVMMVALISDKLTKA 296

Query: 247 GLHAYEISNHSFLG-------AESLHNLNYWRYG-----DYIGIGPGAHSRVKVGSHRVA 294
           G     +               + L   ++  Y      D IG+G  + S ++       
Sbjct: 297 GYLHLGMDCFVKPADALMQAQKDGLLQSSFQGYSTCLTPDLIGLGLSSTSSLQGA----Y 352

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
              E   E +   + K+   +     L+ + +  + ++M +     +  +        N 
Sbjct: 353 FQNECKLEDYYLRLGKDNLPIANTIKLNDDNRVRQAVIMQIVCDLLLDTEVIAEEFNINF 412

Query: 355 DIECERNLQRQGFIER-----VQFSRLRCTQRGMTML 386
                  L     +ER        +++    +G  ML
Sbjct: 413 ADYFCAELLALKVMERSGLLFWDGTKIMIRDKGRLML 449


>gi|257790289|ref|YP_003180895.1| HemN domain-containing protein [Eggerthella lenta DSM 2243]
 gi|257474186|gb|ACV54506.1| HemN domain protein [Eggerthella lenta DSM 2243]
          Length = 410

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 73/377 (19%), Positives = 148/377 (39%), Gaps = 24/377 (6%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +H     P+C ++C YCD  S V   +V   E +  + + E++        R + S+ F 
Sbjct: 4   LHVDLSFPYCPRRCDYCD--SLVATGRVADFERYADALVRELRAAAPEARGRIVMSVRFS 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P L+ P+ +A ++D +   + V+ + +  ++A  + +  +    YRKAG+  + LG 
Sbjct: 62  GGSPVLMPPKALARVMDELRNAFEVAPDADAALQATCAGLSFDALGHYRKAGITFLELGQ 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           ++ +      LG  +  +  I A  L     +  +   L+Y LP Q        +  A+ 
Sbjct: 122 ETFDGVQHDALGLCYPMNSYIDARQLLTFCSWDGLGMSLLYGLPGQNRVNLSTSIVNAVG 181

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY----- 251
           +    ++L  L +  G+  ++ + +      +        +  +    A G         
Sbjct: 182 FGAREIALAPLRLRPGSALHERYAEHPERFDALPRKAWPTDDERLALRAAGEEQLVAGGF 241

Query: 252 -EISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
             ++ H F    +L      R  D   +G+G GA S++     R    + +    +L   
Sbjct: 242 TRVTQHLFSADGTLRASQRARCDDVDRLGVGAGAWSKLDGVVSRSTGDLTR----YLAHA 297

Query: 309 RKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQ--- 365
                     + L+  + +  ++   L   EG S  + E   G +L +     L+R    
Sbjct: 298 EDVRAITAAADVLTPVEASCRYVAGRLFAAEGFSHTEHERRFGASLPVPLRAELERLAEA 357

Query: 366 GFIERVQFSRLRCTQRG 382
           G+    +  R + T  G
Sbjct: 358 GW-ATCEGDRWKLTCEG 373


>gi|229071823|ref|ZP_04205037.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus F65185]
 gi|228711302|gb|EEL63263.1| Oxygen-independent coproporphyrinogen III oxidase 1 [Bacillus
           cereus F65185]
          Length = 156

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 2/152 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + ++     E+    Q     SI +IF GGG
Sbjct: 4   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLDYLEKEIINTVQKVPFDSIKTIFVGGG 62

Query: 80  TPSLIEPQNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +L+ I ++    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 63  TPTALNMEQTKKLLEIINRHLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +  ++ L  +GR H   +A  AI  A+ +  +
Sbjct: 123 TFRDELLEKIGRKHTREDAFLAIREAQEVGFK 154


>gi|315924955|ref|ZP_07921172.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621854|gb|EFV01818.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 431

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 79/384 (20%), Positives = 151/384 (39%), Gaps = 26/384 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +YVH+PFC  KC +C F+            +++  + E+++        SI++I FGGG+
Sbjct: 46  LYVHFPFCDSKCRFCGFDK--EYNLDAINGYVEKVIAELEYYAPY--GFSINNIHFGGGS 101

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQS 139
           PSLI P  +A IL  I KN+ +  N  I +E + +S+ +           + R+S GVQ+
Sbjct: 102 PSLIPPFLLARILAVIRKNYDMLPNAAINMEGSSTSLYQPEMIAFLLDENITRVSTGVQT 161

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ-----WEMELQRA 194
                  F        E    +   R     +  D++Y  P     +      E +L+ A
Sbjct: 162 FYRPLRDFFEIEATLEEVYLTLETLRKNNINVFVDILYGYPDYGFERTPKQIVERDLKTA 221

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +   V  +  Y              KDG + LPS +  + + +   ++    G    E S
Sbjct: 222 MRLDVGGID-YSHLYPMKNKLEPSIKDGAVQLPSTSELLAMMDHDMAMLEEGGYRQ-ETS 279

Query: 255 NHSFLGAESLHNLNYWRYGD----YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
                  + +   +Y+   D     + IG GA   +    +R  +        +   V  
Sbjct: 280 YGFVKRGDIIMETSYYGGEDNVSNCLAIGSGAFGLIGRCKYRNPL--------YHAYVTL 331

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
              +  + + L+ +QQ +   ++G      ++   +E    R + +     L   G +  
Sbjct: 332 PTPSYSQIKVLT-DQQMNYMQIVGFPKILRLNKSQFEHSVCREVFLPKLSKLMEAGLLAE 390

Query: 371 VQFSRLRCTQRGMTMLDSVIANLA 394
           V  + +  T++G   +D++  +L 
Sbjct: 391 VSDAYV-LTKKGRLYVDNIYYDLL 413


>gi|167945034|ref|ZP_02532108.1| coproporphyrinogen III oxidase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 218

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 4/166 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RS 70
           +      L +Y H PFC   C YC  N    + +     ++Q    E++   QL    R 
Sbjct: 53  SNASGQPLSLYFHIPFCDTVCFYCACNKVATKDRSLPAQYLQRVYRELEMQGQLFDRSRP 112

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  + +GGGTP+ I    +  ++D   +N+T+    + E +IE +P   + +  +  R+ 
Sbjct: 113 VEQLHWGGGTPTFISHAEMRELMDETRRNFTLLDDDSGEYSIEIDPREAQGDTIKLLREL 172

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSF 173
           G NR+SLGVQ  + +  + + R  +    +  +  AR   F  +S 
Sbjct: 173 GFNRMSLGVQDFDPKVQKAVNRIQSKQVTLDVLQAARDEGFRSVSI 218


>gi|289524519|ref|ZP_06441373.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289502241|gb|EFD23405.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 228

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 11/237 (4%)

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            AI         +S DLI+ LP QT+  W   L+  L++ + HLS+Y+LT+E+GT     
Sbjct: 2   DAIAALVASGLDVSVDLIFGLPGQTIQSWHRTLKDCLNFGIRHLSIYELTLEEGT----- 56

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
              G+           LY   Q          YEI++ S       HN+ YW+  +++G+
Sbjct: 57  -PWGECPPSGLTEGYPLYRFAQWYLPKKRFIQYEIASFSLPRHWCRHNIAYWQGENFLGV 115

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           GPGA   +    +     I      +   +      V  +E L  ++QA E  ++ LR R
Sbjct: 116 GPGAWGYLDGFRYGNTREIN----DYFDQITSENLPVEYQEILPQDKQATEAAILALRTR 171

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIERVQF-SRLRCTQRGMTMLDSVIANLA 394
            G++   ++   G     +      +     R     R   T +G  + +++  N  
Sbjct: 172 WGVTATTFKRKYGWKAYRKFLDTWMKLPSDCRTSSRGRHAFTPKGFRIANALWENFL 228


>gi|118475032|ref|YP_892793.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885813|ref|ZP_06009852.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|118414258|gb|ABK82678.1| coproporphyrinogen III oxidase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 435

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 81/390 (20%), Positives = 157/390 (40%), Gaps = 28/390 (7%)

Query: 4   LSAYENNMT--GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +   +NN+      + +  +Y H PFC   CP+C F+ +    +   + +  S   EM+ 
Sbjct: 29  IDILQNNLPKIADTNKTYMLYAHVPFCHTFCPFCSFHKY-DYDESAAKKYFYSLRLEMEQ 87

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +++        S++ GGG  +LI    +   L+   K + ++   EI+ E +P+ +E NN
Sbjct: 88  IKE--AGFDFHSMYVGGG-TTLINENELLKTLEHAKKLFNIN---EISCETDPNHIEPNN 141

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYA 178
            + +    ++R+S+GVQS  ++ L+ + R     +    I  +  A  I P  S DLI+ 
Sbjct: 142 LKCFSGL-IDRLSIGVQSFNDEILKKVARYSKFGSKDLLIEKLSKAVGILPITSIDLIFN 200

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P QT  +   ++Q A +   + ++ Y L     +   K      L   S++   + Y +
Sbjct: 201 FPFQTKDELLYDIQTATAIDSEQVTFYPLM---KSNITKDKIAASLGHSSKDNEREFYEI 257

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNYWR-YGDYIGIGPGAHSRVKVGSHRVAISI 297
             S         Y+ +  SF    S     Y      Y+G+G GA S +       A   
Sbjct: 258 ICSKFKN----YYQNNAWSFSKQSSNLKDEYVGTGNQYVGVGSGAFSFLNGELLINAF-- 311

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN--LD 355
             + + + + V     A++ K       +   +L +       I++  +      N  LD
Sbjct: 312 --NLDEYSERVNAYRSAIIAKCKFKKRDKI-RYLFLTQLFDGKINIDKFNRENEVNLKLD 368

Query: 356 IECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           +  E  L +     ++    +  T  G  +
Sbjct: 369 LYLEITLLKTTNAIKIIDKEIILTDFGRYL 398


>gi|301348095|ref|ZP_07228836.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Acinetobacter baumannii AB056]
          Length = 380

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 140/358 (39%), Gaps = 32/358 (8%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT---VSSNVE 107
           ++     E    ++      + S++ GGGTP+L++P +   +   ++  +    +SS +E
Sbjct: 8   YLDFLSREAHLYKEFYQGAKLESLYVGGGTPNLLQPNDYMKLTKVVSSLFPDAGISSPIE 67

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T+E  P     +  +  + AG NR+S+GVQ + ++ +   GR     +   AI L    
Sbjct: 68  MTLEGIPQLFNEDKIRAIKDAGFNRVSMGVQQVNDELIATSGRKQTRKQVFDAIELFHKY 127

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
               + DLIY  P QT+     +L+  +   + H++ Y+L I   + F    K      P
Sbjct: 128 SLSCNVDLIYGWPNQTVEAMLRDLESIVQSGIKHITHYELNIAGRSDFATKQKQ---NTP 184

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI----------- 276
           S    +++YN+ +    + G     + +        L +  Y  Y D +           
Sbjct: 185 SIEKKIEMYNIAKQFLISKGYKQKTVYDWEKEDNNQLISEKY-LYEDNLRDCLDANGQSK 243

Query: 277 -----GIGPGAHSRVKVGSHRVAIS----IEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
                G+G  A +     +     S      ++   +   +  N   V       +E   
Sbjct: 244 MTTMSGLGYAAVNMRLQPNSSSIKSVSAMNHRNLTEYYNAISLNKLPVERMFVHDTEDVK 303

Query: 328 DEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQFSRLRCTQRG 382
             ++   L+  + I+ K +E +   ++ ++ +     L  +G++E      ++    G
Sbjct: 304 LIWIFQALQEMK-INTKKYEKIFNSDIKLDYKPIWDALVEEGWVEHND-EYIKLINEG 359


>gi|325830289|ref|ZP_08163746.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|325487756|gb|EGC90194.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 410

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 145/379 (38%), Gaps = 28/379 (7%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           +H     P+C ++C YCD            E +  + + E++        R ++S+ F G
Sbjct: 4   LHVDLSFPYCPRRCDYCD-ALVATGRVADFERYADALVRELRAAAPEARGRIVTSVRFSG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+P L+ P+ +  ++D +   + V+ + +  ++A  + +  +    YRKAG+  + LG +
Sbjct: 63  GSPVLMPPKALTRVMDELRNTFEVAPDADAALQATCAGLSFDALGHYRKAGITFLELGQE 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + +      LG  +  +  I A  L     +  +   L+Y LP Q        +  A+ +
Sbjct: 123 TFDGVQHDALGLCYPMNSYIDARQLLTFCSWDGLGMSLLYGLPGQNRVNLSTSIVNAVGF 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV--------LPSENVAVDLYNLTQSITSAHGLH 249
               ++L  L +  G+  ++ + +             P+++  + L    +    A G  
Sbjct: 183 GAREIALAPLRLRPGSALHERYAEHPERFDALPRKAWPTDDERLALRAAGEEQLVADGFT 242

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDY--IGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
              ++ H F    +L      R  D   +G+G GA S++     R           +L  
Sbjct: 243 R--VTQHLFSADGTLRASQRARCDDVDRLGVGVGAWSKLDGVVSRSTG----DLARYLAH 296

Query: 308 VRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAG----RNLDIECERNLQ 363
                      + L+  + +  ++   L   EG S  + E   G      L  E ER L 
Sbjct: 297 AEDIRAITAAADVLTPVEASCRYVAGRLFAAEGFSHAEHERRFGAILPAPLRTELER-LA 355

Query: 364 RQGFIERVQFSRLRCTQRG 382
             G+    +  R + T  G
Sbjct: 356 EAGW-ATCEGDRWKLTCEG 373


>gi|218507687|ref|ZP_03505565.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
          Length = 289

 Score =  151 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 109/282 (38%), Gaps = 18/282 (6%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           S+  + FGGG+P+++   +   +++ +     +     I +E +P +   +  +   + G
Sbjct: 1   SVGDVHFGGGSPTIMPSADFLSLMELLRGFVALERGATIAVEVDPRTFTTDMAEALERTG 60

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWE 188
           VNR S+GVQS +    + + R  + ++ + A+  L  +   R++FDL++ LP QT+    
Sbjct: 61  VNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLHGVRRINFDLMFGLPNQTVQSCL 120

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                A++   D L+++  +    +            LP      +  +       A G 
Sbjct: 121 ESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAARAEQASAMADTLVAAGY 179

Query: 249 HAYEISNHSFL----------GAESLHNLNY--WRYGDYIGIGPGAHSRVKVGSHRVAIS 296
               + + +            G    ++L Y        IG+G  A  R   G  +  ++
Sbjct: 180 LQIGLDHFALPDDELAIAQRAGRLRRNSLGYSAETCSTVIGLGASAIGRCGDGYVQNDLT 239

Query: 297 IEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
                  + + +     A+     L++E +    ++  L   
Sbjct: 240 ----QSCYNRHIASGRLAISRGYRLATEDRVRAAIIEQLMCY 277


>gi|300118692|ref|ZP_07056420.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
 gi|298723941|gb|EFI64655.1| coproporphyrinogen III oxidase [Bacillus cereus SJ1]
          Length = 200

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 2/152 (1%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
             Y+H PFC   C YCDFN  V   +   + +++    E+    Q     S+ +IF GGG
Sbjct: 3   AAYIHIPFCQHICHYCDFNK-VFIERQPVDQYLEYLEKEIINTVQKVPFDSMKTIFVGGG 61

Query: 80  TPSLIEPQNIALILDG-IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           TP+ +  +    +LD    +    + N E+T EANP  +         + GVNRIS GVQ
Sbjct: 62  TPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNVLLEGGVNRISFGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +  ++ L  +GR H   +A  AI  A+ +  +
Sbjct: 122 TFRDELLEKIGRKHTREDAFVAIREAQEVGFK 153


>gi|159507389|gb|ABW97714.1| HemN [Bacillus megaterium]
          Length = 171

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           +     +Y L        G H YEISN +  G ES+HNL YW   DY GIG GAHS +  
Sbjct: 5   QEEEAAMYELLMKEMDKQGFHQYEISNFAKSGYESIHNLTYWNNDDYYGIGAGAHSYIDG 64

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                   ++K    ++  V++ G+A + +  ++  ++ +E + +GLR  +G+S ++++ 
Sbjct: 65  IRRANIGPLKK----YIDSVQQKGNAYLNEVSVTEAEKMEEEMFLGLRKTKGVSKEEFKQ 120

Query: 349 LAGRNLDIECERNLQ---RQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
              R L       +Q    +G +     S +  T  G  + + V     
Sbjct: 121 KFNRELKDVFGEPIQEYKEKGLLGE-DNSSVFLTHNGRFLGNEVFQAFI 168


>gi|90019114|gb|ABD84210.1| unknown [Yersinia sp. MH-1]
          Length = 158

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 1/158 (0%)

Query: 41  VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNW 100
             +  V  + ++   L ++     LT  R I +IF GGGTPSL+  + +  +LDG+    
Sbjct: 1   ALKGDVPHQEYVDHLLADLDADLPLTSGREIGTIFIGGGTPSLLSAEAMQSLLDGVRARL 60

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
            V+++ EIT+EANP +VE + F GY++AGVNRIS+GVQS  EQ L  LGR H   EA  A
Sbjct: 61  PVAADAEITMEANPGTVEADRFSGYQRAGVNRISIGVQSFNEQKLVRLGRIHGPEEAKRA 120

Query: 161 IHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSY 197
             LA ++  R  + DL++ LP Q + +   +L++A++ 
Sbjct: 121 AALATSLGLRSFNLDLMHGLPDQMLEEALDDLRQAIAL 158


>gi|270650392|ref|ZP_06222218.1| coproporphyrinogen dehydrogenase [Haemophilus influenzae HK1212]
 gi|270317184|gb|EFA28787.1| coproporphyrinogen dehydrogenase [Haemophilus influenzae HK1212]
          Length = 142

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 4/131 (3%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP----RSISS 73
            L +Y+H P+CV+KCPYCDFNSH ++  + ++++I   L ++Q   Q        + + S
Sbjct: 12  PLSLYIHIPWCVQKCPYCDFNSHAQKGDIPEQDYIYHLLQDLQADLQRFKDVIQQQKLHS 71

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           IF GGGTPSL   ++IA +L  I K      N+EIT+EANP +VE   F+GY  AG+ RI
Sbjct: 72  IFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGITRI 131

Query: 134 SLGVQSLEEQS 144
           S+G+QS  +  
Sbjct: 132 SMGIQSFNDDK 142


>gi|33989769|gb|AAH56485.1| Rsad1 protein [Mus musculus]
          Length = 248

 Score =  146 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 72/225 (32%), Positives = 110/225 (48%), Gaps = 17/225 (7%)

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL+  LP Q +  W  +LQ+ L +  DHLSLYQLT+E+GT  +   + G L  P  ++A 
Sbjct: 1   DLMLGLPAQKVEPWLQQLQKLLYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAA 60

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVG 289
           ++Y   +++    G   YE+SN +  GA S HN  YW+ G Y+GIGPGAH R       G
Sbjct: 61  EMYQEGRTVLRDAGFRQYEVSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGG 120

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
             R A      P++W+K V   GH   +   L   +  +E L MGLR   G++ + W+  
Sbjct: 121 HTREARIQTLEPDNWMKEVTLFGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQF 180

Query: 350 ---------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
                     G + ++E             + +  LRC+  G+ +
Sbjct: 181 EPQLTLWDVFGASKEVEELLAQGL----LLLDYRGLRCSWEGLAV 221


>gi|261221857|ref|ZP_05936138.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           B1/94]
 gi|261757870|ref|ZP_06001579.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|265997821|ref|ZP_06110378.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M490/95/1]
 gi|260920441|gb|EEX87094.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           B1/94]
 gi|261737854|gb|EEY25850.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           sp. F5/99]
 gi|262552289|gb|EEZ08279.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M490/95/1]
          Length = 295

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 97/286 (33%), Gaps = 19/286 (6%)

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +   + GVNR SLGVQ ++ +    +GR         A  L R +    ++FDLIY L
Sbjct: 1   MAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGL 60

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+       +R ++ + D ++ Y                 +  LP  +       + 
Sbjct: 61  PLQTVETLRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIV 119

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G     I + +           E   N N+  Y     G  IG GP + S+  
Sbjct: 120 ADSFIGFGYQPVGIDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFP 179

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +    +      + K V     A V    L    +    ++  L     + +    
Sbjct: 180 GGYAQNISDV----GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVA 235

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                + +    R L   G +  V+   +R T+ G +++  V A  
Sbjct: 236 PGMEFSDEFALLRPLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 280


>gi|261218975|ref|ZP_05933256.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M13/05/1]
 gi|261321526|ref|ZP_05960723.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M644/93/1]
 gi|260924064|gb|EEX90632.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M13/05/1]
 gi|261294216|gb|EEX97712.1| oxygen-independent coproporphyrinogen III oxidase [Brucella ceti
           M644/93/1]
          Length = 295

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 98/286 (34%), Gaps = 19/286 (6%)

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +   + GVNR SLGVQ ++ +    +GR         A  L R +    ++FDLIY L
Sbjct: 1   MAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGL 60

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+       +R ++ + D ++ Y                 +  LP  +       + 
Sbjct: 61  PLQTVETLRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIV 119

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G     I++ +           E   N N+  Y     G  IG GP + S+  
Sbjct: 120 ADSFIGFGYQPVGINHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFP 179

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +    +      + K V     A V    L    +    ++  L     + +    
Sbjct: 180 GGYAQNISDV----GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVA 235

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                + +    R L   G +  V+   +R T+ G +++  V A  
Sbjct: 236 PGMEFSDEFALLRPLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 280


>gi|261315129|ref|ZP_05954326.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M163/99/10]
 gi|261317315|ref|ZP_05956512.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis B2/94]
 gi|265988354|ref|ZP_06100911.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M292/94/1]
 gi|261296538|gb|EEY00035.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis B2/94]
 gi|261304155|gb|EEY07652.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M163/99/10]
 gi|264660551|gb|EEZ30812.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           pinnipedialis M292/94/1]
          Length = 295

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 97/286 (33%), Gaps = 19/286 (6%)

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL 179
             +   + GVNR SLGVQ ++ +    +GR         A  L R +    ++FDLIY L
Sbjct: 1   MAKTLAEMGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGL 60

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+       +R ++ + D ++ Y                 +  LP  +       + 
Sbjct: 61  PLQTVETLRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIV 119

Query: 240 QSITSAHGLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVK 287
                  G     I + +           E   N N+  Y     G  IG GP + S+  
Sbjct: 120 ADSFIGFGYQPVGIDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFP 179

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
            G  +    +      + K V     A V    L    +    ++  L     + +    
Sbjct: 180 GGYAQNISDV----GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVA 235

Query: 348 MLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
                + +    R L   G +  V+   +R T+ G +++  V A  
Sbjct: 236 PGMEFSDEFALLRPLVAHGLVA-VEGRTIRATENGKSLIRLVAAAF 280


>gi|329998615|ref|ZP_08303180.1| HemN region [Klebsiella sp. MS 92-3]
 gi|328538596|gb|EGF64697.1| HemN region [Klebsiella sp. MS 92-3]
          Length = 176

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
           M      VLP ++   D++     + SA G   YE S ++  G +  HNLNYWR+GDY+G
Sbjct: 1   MCAPRPPVLPDDDALWDIFEQGHQLLSAAGYQQYETSAYAKPGFQCQHNLNYWRFGDYLG 60

Query: 278 IGPGAHSRVKVGSHRV-AISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
           IG GAH ++     R+   +  +HP  +++     G  +  +  +    +  EF M   R
Sbjct: 61  IGCGAHGKITFPDGRILRTAKTRHPRGYME-----GRYLERQHDVEEADKPFEFFMNRFR 115

Query: 337 LREGISVKDWEMLAGRNLDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           L E     ++    G               QG+++  + +  + T+ G   L+S++  L 
Sbjct: 116 LLEAAPRAEFSRYTGLEEAAIRPQLDAAIAQGYLQEDEQN-WQITEHGKLFLNSLL-ELF 173

Query: 395 V 395
           +
Sbjct: 174 L 174


>gi|327539591|gb|EGF26200.1| oxygen-independent coproporphyrinogen III oxidase [Rhodopirellula
           baltica WH47]
          Length = 206

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 3/150 (2%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPR 69
                N LG+Y+H PFC K+C +C F           + ++ +   E+  + QL   G R
Sbjct: 51  APTSENPLGLYLHIPFCRKRCKFCYFKVFTDVKAQEVQRYVDALCNEISMVSQLPVMGDR 110

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK-A 128
               ++FGGGTPS + P+ +  + D + ++ T     E+T E  P ++     +  R+  
Sbjct: 111 PFRFVYFGGGTPSFLSPKQLTKLADRLREHITWDGAEEVTFECEPGTLSETKVKTLREQL 170

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
           GV R+SLG+++  ++ L   GR H + +  
Sbjct: 171 GVTRLSLGIENFSDKLLEENGRAHLSKQVF 200


>gi|163867824|ref|YP_001609028.1| hypothetical protein Btr_0590 [Bartonella tribocorum CIP 105476]
 gi|161017475|emb|CAK01033.1| hypothetical protein BT_0590 [Bartonella tribocorum CIP 105476]
          Length = 259

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 13/207 (6%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISS 73
           + ++ +Y+H PFC   C +C F     +Y    E+++ +  TE++            I S
Sbjct: 50  ARTISLYLHIPFCETICSFCPFQKGAYKYIKQIESYMSALTTEIRNKGNFIRSLKGPIRS 109

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I+ GGGTPSL+   NI  I   +   + +SS  E T+E+ P SV  +     R+ GVNRI
Sbjct: 110 IYIGGGTPSLLSADNIRHIGKVLYAEFELSSLAEFTLESEPKSVTRDKLYAAREIGVNRI 169

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           S GVQS  E+            +    +  ++ I   + FDL+Y    Q   +   +L++
Sbjct: 170 SFGVQSFIERFRSLFNLTSTREQIKNTVDWSQEIIGHVGFDLLYGTHSQQAEELLYDLKQ 229

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           A             T++  T       
Sbjct: 230 A-----------SFTLKPSTSMQSTIW 245


>gi|330722452|gb|EGH00289.1| Coproporphyrinogen III oxidase2C oxygen-independent [gamma
           proteobacterium IMCC2047]
          Length = 252

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 97/257 (37%), Gaps = 20/257 (7%)

Query: 93  LDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           +    K++ +    + E +IE +P  + V+     R+ G NRIS+G+Q  +    + + R
Sbjct: 1   MAATRKHFKLLDDDSGEYSIEIHPGQMSVDTIPVLREIGFNRISMGIQDFDADVQKAVNR 60

Query: 151 NHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
            ++ +E    +       F  +S DLIY LP QT+   +  L++ +    D LSL+    
Sbjct: 61  FNSVAEVSELMDAIHREGFHSVSMDLIYGLPMQTLDTLKKTLEQTIELNPDRLSLFNYAH 120

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE------- 262
               LF    +  +  LP+  + + +     S  +  G     + + +    E       
Sbjct: 121 MPH-LFKVQKQIDESQLPAPEIKLQMLEYAISRLTDAGYVYIGMDHFAKPDDELTIAQQQ 179

Query: 263 ---SLHNLNYWRYG--DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
                +   Y  +G  D I +G  + S +      V     K    +   +      V +
Sbjct: 180 GKLQRNFQGYATHGGCDMIAMGVSSISAIDN----VYAQNFKDINDYQAAIDAGKLPVNK 235

Query: 318 KEFLSSEQQADEFLMMG 334
              L+ +    + ++  
Sbjct: 236 GFTLNDDDILRKTVINK 252


>gi|148683982|gb|EDL15929.1| radical S-adenosyl methionine domain containing 1, isoform CRA_b
           [Mus musculus]
          Length = 246

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 17/223 (7%)

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +  LP Q +  W  +LQ+ L +  DHLSLYQLT+E+GT  +   + G L  P  ++A ++
Sbjct: 1   MLGLPAQKVEPWLQQLQKLLYHCDDHLSLYQLTLERGTSLFAQVQQGTLPAPDPDLAAEM 60

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV----KVGSH 291
           Y   +++    G   YE+SN +  GA S HN  YW+ G Y+GIGPGAH R       G  
Sbjct: 61  YQEGRTVLRDAGFRQYEVSNFARNGALSTHNWTYWQCGQYLGIGPGAHGRFVPQGTGGHT 120

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML-- 349
           R A      P++W+K V   GH   +   L   +  +E L MGLR   G++ + W+    
Sbjct: 121 REARIQTLEPDNWMKEVTLFGHGTRKCVRLGKLELLEEVLAMGLRTDVGVTHQHWQQFEP 180

Query: 350 -------AGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
                   G + ++E             + +  LRC+  G+ +
Sbjct: 181 QLTLWDVFGASKEVEELLAQGL----LLLDYRGLRCSWEGLAV 219


>gi|255025041|ref|ZP_05297027.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL J1-208]
          Length = 160

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 87/165 (52%), Gaps = 8/165 (4%)

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
            + G L LPS++   ++Y+L  +    HG   YEISN +  G +S HN+ YW    Y G 
Sbjct: 1   MQKGKLFLPSQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGF 60

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           G GAH  V    +     I+K    +++ ++KN     +++ L+ +++ +E + +GLR  
Sbjct: 61  GAGAHGYVGNTRYSNFGPIKK----YMEPLQKNILPTFQQKELTLKEKMEEEMFLGLRKV 116

Query: 339 EGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQ 380
           EG++   ++   G++LD      +Q+   +G++E  + + +  T+
Sbjct: 117 EGVNKHHFKQKFGQDLDATFMNAIQKTTAKGWLENNEEN-VALTR 160


>gi|331269660|ref|YP_004396152.1| bioB/LipA-like protein [Clostridium botulinum BKT015925]
 gi|329126210|gb|AEB76155.1| bioB/LipA-like protein [Clostridium botulinum BKT015925]
          Length = 365

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 106/262 (40%), Gaps = 11/262 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ NS         +NF+++ +   ++++ +    SI  + F G
Sbjct: 11  IPIFVPHEGCPHDCVFCNQNSITGSSSKVDKNFVENTIE--EYLKTINKENSIIEVSFFG 68

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I+      +L    +   +     I +   P  ++ N  +  +    + I LGVQ
Sbjct: 69  GTFTAIDINKQNELLSVAKRYKDLGKIDYIHLSTRPDYIDDNILRNLKDYSADVIELGVQ 128

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L   GR H   + + A  L +     +   ++  LP     +     ++ +   
Sbjct: 129 SLDDEVLLKSGRGHTVDDVVKASQLIKEYGFVLGLQVMLGLPGDNFEKDIYTAKKIIELK 188

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +   +Y   + K T    M+ +      +   A+++  +  S+  A+ ++   +     
Sbjct: 189 PEIARIYPALVVKNTPMETMYINNKYKPYTLEEAIEVGQIVYSMLVANDINVIRV----- 243

Query: 259 LGAESLHNLNYWRYGDYIGIGP 280
            G +    +NY   G+ I  GP
Sbjct: 244 -GLQPTEEINY--GGELIA-GP 261


>gi|34763193|ref|ZP_00144158.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887131|gb|EAA24237.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 232

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 6/204 (2%)

Query: 5   SAYENNMTGQGSNS-LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + + + +  +  N  LG+Y H P+C K C +C+ N   ++     E + +    E++   
Sbjct: 28  NDFLDLLNRENKNKQLGIYFHTPYCDKICSFCNMNR--KQLDNDLEEYTKYLCEEIKKYG 85

Query: 64  --QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +      I  +FFGGGTP++ + + +  IL  + +N+  + + E+T E    ++    
Sbjct: 86  AYEFCKTSEIDVVFFGGGTPTIFKKEQLERILKTLNENFKFAKDYEMTFETTLHNLSFEK 145

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALP 180
            +   + GVNRIS+G+Q+   +  + L R ++ +  +  +   +  F   +  D+IY   
Sbjct: 146 LKVMEENGVNRISVGIQTFSNRGRKLLNRTYDKNYVVERLKEIKKRFSGLVCIDIIYNYA 205

Query: 181 KQTMTQWEMELQRALSYAVDHLSL 204
            QT  +   +         D  S 
Sbjct: 206 NQTDEEVLQDADLLAEVGADSASF 229


>gi|301058172|ref|ZP_07199224.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
 gi|300447804|gb|EFK11517.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
          Length = 339

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 88/235 (37%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  +C +CD      R     +        +     +  G      + F G
Sbjct: 6   IPIFISHAGCPHRCLFCDQEKITDRSTHITDPSEVRKTLDAAARAKRFGSYKNRELAFYG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +   ++  +LD  A      +   I I   P S++       +   V  + LGVQ
Sbjct: 66  GTFTGLSKSHMESLLDAAAPYIRNGTLNSIRISTRPDSLDAERLAILKAYHVTTVELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+ +  L    R H A ++  A+ + +N    +   L+  LP  +   +     R L+  
Sbjct: 126 SMNDWVLALSRRGHTAKDSQEAVRMLKNHGFSVGIQLMPGLPGDSKESFLKTADRVLALK 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + LY   + KGT   +++ +G     S   A+ +   +  +   +G+    I
Sbjct: 186 PQMVRLYPALVIKGTGMARLYDEGTYRPFSLEEALSICVESVMLFEQNGIPVIRI 240


>gi|168188028|ref|ZP_02622663.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
 gi|169294131|gb|EDS76264.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum C str. Eklund]
          Length = 363

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 105/262 (40%), Gaps = 11/262 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ N+           F++  +   ++++ +    SI  + F G
Sbjct: 9   IPIFVPHEGCPHDCVFCNQNTITGTSNKVNGKFVEETIE--EYLKTIKRENSIVEVSFFG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I+ +    +L    K   +     I +   P  ++    +  +K   + I LGVQ
Sbjct: 67  GTFTAIDVEKQNELLTVAKKYKDMGKIDYIHLSTRPDYIDDFILENLKKYSADVIELGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L   GR H   + I A  L +     +   ++  LP  T  +     ++ +   
Sbjct: 127 SLDDEVLIQSGRGHTVEDVIKASKLIKKYNFVLGLQIMLGLPGDTFKKDIETTKKIIQLK 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D   +Y   + K T   KM+ +      +   A+ +  +  S+  A+ ++   +     
Sbjct: 187 PDIARIYPTLVVKDTPMEKMYINNIYKPYTLEEAIKIGKVVYSMLVANDINVIRV----- 241

Query: 259 LGAESLHNLNYWRYGDYIGIGP 280
            G +    +NY   G  + +GP
Sbjct: 242 -GLQPTEEINY---GKELVVGP 259


>gi|167037695|ref|YP_001665273.1| radical SAM domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116110|ref|YP_004186269.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856529|gb|ABY94937.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929201|gb|ADV79886.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 354

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   + +   E +++     ++   +     +   + F G
Sbjct: 8   IPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVR---QTIETHLKTLPSNAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I      L L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDKQNLYLGIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + + A++L R    ++   ++  LP   + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G     +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPALVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|326389509|ref|ZP_08211076.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325994514|gb|EGD52939.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 354

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   + +   E +++     ++   +     +   + F G
Sbjct: 8   IPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVR---QTIETHLKTLPRDAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I      L L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDMQNLYLGIAKEYLDNGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + + A++L R    ++   ++  LP   + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G     +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|307264837|ref|ZP_07546399.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306920095|gb|EFN50307.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 354

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   + +   E +++     ++   +     +   + F G
Sbjct: 8   IPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVR---QTIETHLKTLPRDAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I      L L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDMQNLYLGIAKEYLDNGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + + A++L R    ++   ++  LP   + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G     +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISRKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|260168409|ref|ZP_05755220.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
          Length = 288

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 95/279 (34%), Gaps = 19/279 (6%)

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQ 186
            GVNR SLGVQ ++ +    +GR         A  L R +    ++FDLIY LP QT+  
Sbjct: 1   MGVNRASLGVQDVDSRVQMAIGRVQPIETVAEATRLLREVGINRINFDLIYGLPLQTVET 60

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                +R ++ + D ++ Y                 +  LP  +       +        
Sbjct: 61  LRETCERVVTLSPDRVACYGYAHLPQ-RRANQRLIDENTLPDADERFRQARIVADSFIGF 119

Query: 247 GLHAYEISNHSFLG-------AESLHNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVA 294
           G     I + +           E   N N+  Y     G  IG GP + S+   G  +  
Sbjct: 120 GYQPVGIDHFALPDDDLAIAAREGTLNRNFQGYTNDRCGTLIGFGPSSISQFPGGYAQNI 179

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
             +      + K V     A V    L    +    ++  L     + +         + 
Sbjct: 180 SDV----GQYRKRVEAGELATVRGYTLRDTDRIRSAIISALMCNFCVDLNAVAPGMEFSD 235

Query: 355 DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
           +    R L   G +  V+   +R T+ G +++  V A  
Sbjct: 236 EFALLRPLVADGLVA-VEGRTIRATENGKSLIRLVAAAF 273


>gi|213419717|ref|ZP_03352783.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 162

 Score =  141 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
             D++     + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH +V     
Sbjct: 1   MWDIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPDG 60

Query: 292 RVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           R+  + + +HP  +++     G  +  +  +S + +  EF M   RL E     ++    
Sbjct: 61  RILRTTKTRHPRGYMQ-----GRYLESQRDVSDDDKPFEFFMNRFRLLERAPRAEFVDYT 115

Query: 351 GRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           G    +  +       QG++   +    + T+ G   L+S++     
Sbjct: 116 GLTEAVIRQPIDEAIAQGYLTECE-QYWQITRHGKLFLNSLLELFLA 161


>gi|32490826|ref|NP_871080.1| hypothetical protein WGLp077 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166032|dbj|BAC24223.1| yggW [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 271

 Score =  141 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 21/275 (7%)

Query: 20  GVYVHWP--FCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +Y++ P  F  KK     F  ++    ++     +I++ L +++  +  +  + I+++F
Sbjct: 9   SLYINIPWIF-QKK-----FFKNMLPCEFEKLVSFYIKNTLNDLEIDKNFSKNKKINTLF 62

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GG   ++I   NI  +  GI        N+E TIE N           Y+K G+NRIS+
Sbjct: 63  IGGNV-NVISENNIKTLFFGIKNKLNFKENMEFTIEINTKLDLEKKIFLYKKIGINRISI 121

Query: 136 GVQSLEEQ--SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
                 ++    + +    N    I +I L  NI   ++ DL +    QT  +    +++
Sbjct: 122 EKNIFCKKTSISKSINNYINEISKIVSICLRVNI-KNINVDLPFFYEYQTNDEILHNIEK 180

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                V H + YQ                  ++  +     +YN  Q++    G H YEI
Sbjct: 181 IFLLKVPHQTCYQ-------HNCNFIFKNKKMVEKKTKIKKIYNEIQNLFKFFGFHQYEI 233

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
            +++  G E LHNLNY+++GDY GIG G+H +  +
Sbjct: 234 CSYALPGFECLHNLNYFQFGDYFGIGCGSHGKFTL 268


>gi|253681549|ref|ZP_04862346.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
 gi|253561261|gb|EES90713.1| radical SAM domain protein [Clostridium botulinum D str. 1873]
          Length = 364

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 100/251 (39%), Gaps = 8/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ NS          NF+++ +   ++++ +    SI  + F G
Sbjct: 10  IPIFVPHEGCPHDCVFCNQNSITGSSSKVDGNFVKNTIE--EYLKTINKENSIIEVSFFG 67

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I+      +L        +     I +   P  ++ N  +  ++   + I LGVQ
Sbjct: 68  GTFTAIDINKQNELLRVAKHYKDLGKIDYIHLSTRPDYIDDNILKNLKEYSADVIELGVQ 127

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L   GR H   + + A  L +     +   ++  LP     +     ++ +   
Sbjct: 128 SLDDEVLLKSGRGHTVDDVVKASKLIKEYGFVLGLQVMLGLPGDNFEKDIYTAKKVIDLK 187

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +   +Y   + K T    M+ +      +   A+++  +  S+  A+ ++   +     
Sbjct: 188 PEIARIYPALVVKNTPMETMYINNKYKPYTLEEAIEVGQIVYSMLVANDINVIRV----- 242

Query: 259 LGAESLHNLNY 269
            G +    +NY
Sbjct: 243 -GLQPTEEINY 252


>gi|167040356|ref|YP_001663341.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914440|ref|ZP_07131756.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307724324|ref|YP_003904075.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166854596|gb|ABY93005.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|300889375|gb|EFK84521.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307581385|gb|ADN54784.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
          Length = 354

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 101/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   + +   E +++     ++   +     +   + F G
Sbjct: 8   IPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVR---QTIETHLKTLPSNAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I      L L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDKQNLYLGIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + +  ++L R    ++   ++  LP   + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKTVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G     +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPTLVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|218670254|ref|ZP_03519925.1| coproporphyrinogen III oxidase [Rhizobium etli GR56]
          Length = 240

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 89/236 (37%), Gaps = 14/236 (5%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                 + ++ FGGGTP++++PQ  + ++  +   +T  ++  + +E +P ++       
Sbjct: 1   AGNDVPVKTVHFGGGTPTIMKPQEFSALMAKLRSAFTFEADAGVAVEIDPRTLAAPMIDA 60

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQT 183
             + GV+R SLGVQS +      + R  +  +   A + L  +    ++FDLIY LPKQT
Sbjct: 61  LAENGVDRASLGVQSFDPVVQAAINRLQSFEQTETAVVGLRSSGVSSINFDLIYGLPKQT 120

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +      ++ A     +  +++                 +  LP      +         
Sbjct: 121 VQSCVETVRLAARLRPERFAVFGYAHIPA-FKKHQRLIDESTLPDAIQRNEQAEAIAEEL 179

Query: 244 SAHGLHAYEISNHSFLGAE-------SLHNLNYWRYGD-----YIGIGPGAHSRVK 287
              G     + + +    +            N+  Y        IG+G  A  R+ 
Sbjct: 180 QKAGYQRIGLDHFALPDDQLALAARNGAMRRNFQGYTTDDCDSLIGLGASAIGRLP 235


>gi|256750710|ref|ZP_05491595.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750293|gb|EEU63312.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 380

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   + +   E +++     ++   +     +   + F G
Sbjct: 8   IPLFIPHLGCPFKCVFCNQNSITGQQQEITEEYVR---QTIETHLKTLPSNAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I      L L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDKQNLYLGIAKEYLDKGKIDAIRLSTRPDYIDTEILQNLKRYKVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + + A++L R    ++   ++  LP   + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPGDNLEKSLNTAYKIVELK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G     +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPALVIKNTYLERMYKEGRFFPLTLQEAVEISKKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|222630732|gb|EEE62864.1| hypothetical protein OsJ_17667 [Oryza sativa Japonica Group]
          Length = 263

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 2/154 (1%)

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              + ++FFGGGTPSL+ P+ +A +LD +   + +S++ E++IE +P + +    +    
Sbjct: 79  GVPLETVFFGGGTPSLVPPRLVAAVLDALRTRFGLSASPEVSIEMDPGTFDAAKLRELVG 138

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMT 185
            GVNR+SLGVQ+ +E  LR  GR H   E   A+ +  A       S DLI +LP QT  
Sbjct: 139 LGVNRVSLGVQAFQEDLLRACGRAHGLREVHDAVGIVTACEGLQNWSMDLISSLPNQTEE 198

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            WE  L+  +     H+S+Y L IE+GT F ++ 
Sbjct: 199 MWEESLRCTVDARPTHVSVYDLQIEQGTKFGQLW 232


>gi|239617122|ref|YP_002940444.1| Coproporphyrinogen dehydrogenase [Kosmotoga olearia TBF 19.5.1]
 gi|239505953|gb|ACR79440.1| Coproporphyrinogen dehydrogenase [Kosmotoga olearia TBF 19.5.1]
          Length = 406

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/303 (19%), Positives = 119/303 (39%), Gaps = 24/303 (7%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            S ++G+Y+H PFC   C +C    H  +Y           + +     +L  PR  +S+
Sbjct: 27  PSENIGLYLHVPFCKHFCDFC--PYHKLKYDPALAREYAGLVKK---EYRLHEPRRFNSL 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
           + GGGTPS  +   +  +LD +  N       EI +E +P        Q  ++ G+N IS
Sbjct: 82  YIGGGTPSG-DLTLLKELLDFLRDNV----MGEIALEVHPIDATSEKLQEMKELGINYIS 136

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
           LG+QSL++  L+  GR ++A     A+    +  F  +  DL++        + + +L++
Sbjct: 137 LGIQSLDDDVLKHFGRGYSAKTNFLALENSIKAGFDFVDVDLVFDPLAFADKKIQSDLEK 196

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +  +   +S+Y +     T F            +    + +++    I   +G     +
Sbjct: 197 IMKLSPQQISVYPMMRFSCTKFRNTRN-------NSRKELKIFDRLDEIADKNGYERDTL 249

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
             +        +      +  Y+G+G  A +           S+      + K + +   
Sbjct: 250 WTYKKKNLVGRYTSVAREF--YLGLGLSASTFSGEIFAVNTFSMN----LYRKRLEEGKL 303

Query: 314 AVV 316
            + 
Sbjct: 304 PIE 306


>gi|197293341|gb|ACH58233.1| oxygen-independent coproporphyrinogen III oxidase [Haemophilus sp.
           CCUG 30218]
          Length = 189

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 2/189 (1%)

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +     L   R ++ I +GGGTP+ +     A ++  + K++TVS   EI+IE +P  +E
Sbjct: 1   ISARSALFKHRLVTQIHWGGGTPTYLSEIQSARLMAMLKKHFTVSETAEISIEIDPRRIE 60

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIY 177
           ++     R  G NR+S+GVQ   +   + + R  +       +  AR   F   + DLIY
Sbjct: 61  LSMLDHLRHIGFNRMSMGVQDFNKDVQKAVNREQDEDFIHTLLDHARELGFQSTNLDLIY 120

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            LP QT+  +   L++ ++   D LS++       +      K  +  LP+    + +  
Sbjct: 121 GLPLQTVESFMFTLEKVIALNPDRLSVFNYAHLP-SRVPGQAKIKEYQLPAPETKLTILQ 179

Query: 238 LTQSITSAH 246
            T       
Sbjct: 180 KTIETLGNA 188


>gi|226328810|ref|ZP_03804328.1| hypothetical protein PROPEN_02710 [Proteus penneri ATCC 35198]
 gi|225201996|gb|EEG84350.1| hypothetical protein PROPEN_02710 [Proteus penneri ATCC 35198]
          Length = 164

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 10/164 (6%)

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA 294
            ++    + +A G   YE S +   G +  HNLNYWR+GDY+GIG GAH ++     R+ 
Sbjct: 8   FFSEGDKLLTAAGYQQYETSAYCKPGFQCEHNLNYWRFGDYLGIGCGAHGKISFEDGRIM 67

Query: 295 ISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
            +++ KHP+ +++     G  + ++ F+ ++ +  EF M   RL E    +D+    G +
Sbjct: 68  RTVKTKHPKGFME-----GRYLDQQHFVDNDDRPFEFFMNRFRLLEAFPRQDFSDYTGLS 122

Query: 354 LDIEC--ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            ++           G+I     +  + T  G   L+S++  L +
Sbjct: 123 EEVIRHQIDEALALGYISETD-THWQITPHGKLFLNSLL-ELFL 164


>gi|118443799|ref|YP_878291.1| bioB/LipA-like protein [Clostridium novyi NT]
 gi|118134255|gb|ABK61299.1| bioB/LipA-like protein [Clostridium novyi NT]
          Length = 359

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 106/262 (40%), Gaps = 11/262 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ N+           F++  +   Q+++ +    SI  + F G
Sbjct: 9   IPIFVPHEGCPHDCVFCNQNTITGTSNKVNGKFVEETIE--QYLKTIKRENSIVEVSFFG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I+ +    +L    +   +     I +   P  ++    +  +K   + I LGVQ
Sbjct: 67  GTFTAIDIEKQNELLTVAKRYKDMGKIDYIHLSTRPDYIDDFILENLKKYSADVIELGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L   GR H   + I A  L +     +   ++  LP  T  +     ++ +   
Sbjct: 127 SLDDEVLIKSGRGHTVEDVIKASKLIKKYNFVLGLQMMLGLPGDTFEKDIETAKKIIKIK 186

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +   +Y   + K T   KM+ +      + + AV +  +  S+  A+ ++   +     
Sbjct: 187 PEIARIYPTLVVKNTPMEKMYINNIYKPYTLDEAVKIGKVVYSMLIANDINVIRV----- 241

Query: 259 LGAESLHNLNYWRYGDYIGIGP 280
            G +    +NY   G  + IGP
Sbjct: 242 -GLQPTEEINY---GKELVIGP 259


>gi|319940965|ref|ZP_08015302.1| hypothetical protein HMPREF9464_00521 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805538|gb|EFW02333.1| hypothetical protein HMPREF9464_00521 [Sutterella wadsworthensis
           3_1_45B]
          Length = 490

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 74/382 (19%), Positives = 134/382 (35%), Gaps = 19/382 (4%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR--QLTGPRSISSIFFGGGT 80
           VH PFC  KC  C    H  +    +  +  + + EM             I ++ FGGGT
Sbjct: 77  VHAPFCESKCDGCGCWQHAYKELESR-RWADALVREMAAWADTHAQAGAPIQALRFGGGT 135

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PS +EP +I  +L    +   +S++  I ++A          +     GV R  L V+S 
Sbjct: 136 PSALEPVDILHVLAKARQYLPLSNDCSIELQARVHGFSEEKIEAALAGGVTRFVLPVRSF 195

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +  +  GR      A   +          ++ +L + LP Q++  W  +L+RA    +
Sbjct: 196 STEVRQAAGRLDAGEAAEKLLKRLTEYNESAVAVELNFGLPGQSLEVWTADLERACQLPL 255

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D L +      +  +  +  K      P+  +   ++     + + +G         S  
Sbjct: 256 DGLMI--RAAGEPDMLGEAAKTFRAADPA--LMARMHERAFEVLADNGWERRTALAWSRS 311

Query: 260 GA-ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEK 318
               +  ++      D    G GAH R+        + IE     WL  V      V   
Sbjct: 312 ERDRTTFDVLAAGDADKFAFGCGAHGRL----FGRELLIEPELGEWLSAVWMGRRPVSSV 367

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE---RNLQRQGFIERVQ--F 373
                       L+    L    S++  E  +G  +    E    +    G + R     
Sbjct: 368 AE-PKSGWRAAALLAQGALLGRFSLERIEHASGLRITESLEPLFDDWTAAGLLRRTGALG 426

Query: 374 SRLRCTQRGMTMLDSVIANLAV 395
           + +R T  G+    ++ A +A+
Sbjct: 427 TWIRLTDAGLYWHQALAARMAL 448


>gi|224531741|ref|ZP_03672373.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia valaisiana VS116]
 gi|224511206|gb|EEF81612.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia valaisiana VS116]
          Length = 376

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 67/337 (19%), Positives = 131/337 (38%), Gaps = 31/337 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L ++++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIF------------NRILDKLKYHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   ++   E T+E  P  V+   F+   +  V RI+LGVQ
Sbjct: 54  VDFCLCGQDNLKFIFTSLSKYINLALLEEFTLEIIPGYVDFEKFKLLDEFFVTRINLGVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G      E +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLKFRKIIGIPEIPYEKMNILINNIRKFPFDLNIDMTINMPLQKKSHLKYDLKELLSY 173

Query: 198 AVDHLSLYQLTIE-KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +H+       E +G          D        +  L+        ++G   YEI+N 
Sbjct: 174 MPEHICFSDFICEKEGLTLRDFDNGID--------SEKLWFCALECLESNGYINYEITNF 225

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
           +  G ES HN   W    Y+G+G  A S +    +    ++ +    ++K      + +V
Sbjct: 226 ALKGHESKHNKLNWELKPYLGLGLHAVSLLFCSDNNNIRALIRKDNGFVKS----NNYLV 281

Query: 317 EKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
             + L   +      + GL   +G++++   +    +
Sbjct: 282 TFKLLEDLEFFIYHFIQGLGTIQGVNLRSLRLRFEYD 318


>gi|219685702|ref|ZP_03540515.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii Far04]
 gi|219672752|gb|EED29778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii Far04]
          Length = 377

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 131/338 (38%), Gaps = 38/338 (11%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIF------------NKILEELKYYLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   ++   E T+E  P  V+   F+   +  + RI+LGVQ
Sbjct: 54  VDFCLCRQDSLKFIFTSLSKCINLALLEEFTLEIIPGYVDFEKFKLLDEFFITRINLGVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I   R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLKFRKIMGIPEISYEKMNILIKNIRKFPFDLNIDMTINIPFQKKSDLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV---AVDLYNLTQSITSAHGLHAYEIS 254
             +H+       E+           DL L   +    +  L+        ++G   YEI+
Sbjct: 174 VPEHICFSDFICEE----------QDLALRDFDNGIGSEKLWFYALECLESNGYINYEIT 223

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVRKNG 312
           N    G ES HN   W    Y+G+G  A S       ++ V   I K        V+ N 
Sbjct: 224 NFMLKGHESKHNKLNWELKPYLGLGLHAVSLLFCNDKNNNVRALIRKDSG----FVKANN 279

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           H + + E L   +      + GL   +G++++   +  
Sbjct: 280 H-LAKFELLEDLEFFIYHFIQGLGTIQGVNLRSLRLRF 316


>gi|219684253|ref|ZP_03539197.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii PBr]
 gi|219672242|gb|EED29295.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia garinii PBr]
          Length = 377

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 69/335 (20%), Positives = 128/335 (38%), Gaps = 32/335 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIF------------NKILEELKYYLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   ++   E T+E  P  V+   F+   +  + RI+LGVQ
Sbjct: 54  VDFCLCRQDSLKFIFTSLSKCINLALLEEFTLEIIPGYVDFEKFKLLDEFFITRINLGVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I   R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLKFRKIMGIPEISYEKMNILIKNIRKFPFDLNIDMTINIPFQKKSDLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N  
Sbjct: 174 IPEHICFSDFICEE-------QDPALRDFDNGIGSEKLWFYALECLESNGYINYEITNFM 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
             G ES HN   W    Y+G+G  A S       ++ V   I K        V+ N H +
Sbjct: 227 LKGHESKHNKLNWELKPYLGLGLHAVSLLFCNDKNNNVRALIRKDSG----FVKANNH-L 281

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            + E L   +      + GL   +G++++   +  
Sbjct: 282 AKFELLEDLEFFIYHFIQGLGTIQGVNLRSLRLRF 316


>gi|34764149|ref|ZP_00145018.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27886082|gb|EAA23389.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 165

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +++LP QT    + +L++ ++   +H+S+Y L  E+GT F++  K G L     ++   +
Sbjct: 1   MFSLPNQTWAMLQNDLEKLVNLNPNHISIYSLIWEEGTKFFRDLKSGKLKETDNDLEASM 60

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
           Y        +     YEISN S  G ES HN  YW   +Y+G+G  A   +    ++   
Sbjct: 61  YEYIIEFLKSKDYIHYEISNFSKKGFESSHNSIYWENKNYLGVGLSAAGYLDNVRYKNFF 120

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
               + + +   + KN   + EKE L+ E       ++G RL   I
Sbjct: 121 ----NLKDYYNNLDKNILPIDEKEILTQEDIEQYRYLVGFRLLNKI 162


>gi|169336971|ref|ZP_02863148.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
 gi|169296481|gb|EDS78614.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
          Length = 320

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/317 (18%), Positives = 138/317 (43%), Gaps = 20/317 (6%)

Query: 89  IALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +L+ I K   +       +IE +P+++        +K  VNRIS+G+QS +E  L+ 
Sbjct: 1   MEKLLNAIEKYLNIDFKETFFSIETSPNTMNKEYMGLLKKFHVNRISMGIQSFKECELKE 60

Query: 148 LGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + R         ++ L +     + + DLIY +P Q++  +   L++ + Y  + + LY 
Sbjct: 61  IYRFETIDNINKSLGLMKKENIEIRNLDLIYGIPSQSIESFIDSLKKVIQYNSEEVFLYP 120

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA-ESLH 265
           L I + T  Y+ ++         +  + +Y L ++     G     + N       E L+
Sbjct: 121 LYIRERTKLYEKYER------DYHKMIKMYELGRNELIKSGYIQTSMRNFIRKDITEKLY 174

Query: 266 NLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEK-----HPESWLKMVRKNGHAVVEKEF 320
                +  + IGIG GA S +    +    ++ +         +L  + +N +       
Sbjct: 175 PSYSCQENEMIGIGCGARSYISNVHYSRKYAVNQGNINNIINDYL--MEENFYYATYGYV 232

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRC 378
           LS ++   ++++  +    G+ + ++     +N+  D +  + L  +GF+ ++  +++  
Sbjct: 233 LSEDEIKRKYVLKSILKVTGLDINEYFKRFNKNIFHDFKEIKLLIDKGFL-KISENQIYP 291

Query: 379 TQRGMTMLDSVIANLAV 395
           T+ G+   D ++  L +
Sbjct: 292 TENGIKYSD-IMGCLFI 307


>gi|309785707|ref|ZP_07680338.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
 gi|308926827|gb|EFP72303.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
          Length = 201

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 5/180 (2%)

Query: 10  NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTG 67
           N T      L VY+H PFC   C +C F  + R  +    ++  + + E++      L  
Sbjct: 24  NQTASPRKRL-VYLHIPFCATHCTFCGFYQN-RFNEDACAHYTDALIREIEMEADSVLHQ 81

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
              I +++FGGG PS +   ++A I+  + +   ++ + EITIE    + +         
Sbjct: 82  SAPIHAVYFGGGMPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDACLD 141

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQ 186
           AG NR S+G+QS   +  + + R  +   AI  +  L +     +  DL++ LP Q    
Sbjct: 142 AGANRFSIGIQSFNSKIRKKMARTSDGPTAITFMESLVKRDRATVVCDLLFGLPGQDAQT 201


>gi|325677950|ref|ZP_08157592.1| radical SAM domain protein [Ruminococcus albus 8]
 gi|324110504|gb|EGC04678.1| radical SAM domain protein [Ruminococcus albus 8]
          Length = 415

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 3/216 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +++ ++V    C  KC +CD N+   + K+  ++ ++     MQ + Q+      + I 
Sbjct: 2   HSNISIFVPHVGCPHKCAFCDQNAITGKQKLPHKDDVEK--ACMQALSQVDDISD-TEIA 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GG+ + I    +  +L    K         I I   P  +        +  GV  I L
Sbjct: 59  FFGGSFTAIPRDYMLELLTAAKKFVGGGRFKGIRISTRPDYINAEILDILKSYGVTAIEL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS+ ++ L    R H+A +   A  L R     +   ++  L K    Q +      +
Sbjct: 119 GAQSMSDEVLEANERGHSAEDVRQASRLIREYGFELGLQMMVGLYKSGHQQEDETFNEIM 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           +   D + +Y + I K T   K+   G+    S   
Sbjct: 179 AIRPDTVRIYPVVILKNTRLAKLLASGEYKPMSFEE 214


>gi|86139126|ref|ZP_01057697.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
 gi|85824357|gb|EAQ44561.1| coproporphyrinogen III oxidase [Roseobacter sp. MED193]
          Length = 343

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 97/273 (35%), Gaps = 22/273 (8%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I  +         ++   E ++E +P+  +         AG+ R S+GVQ  +  + + +
Sbjct: 2   IRTLTQAQNSLAPLAPEAEFSVEIDPNEFDQARCDALVAAGLTRASIGVQGFDTTTQQAI 61

Query: 149 GRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           GR+ +       + + R    R ++ DL++ LP Q + Q     ++ LS + D ++LY  
Sbjct: 62  GRSLSFDRVAGVVKMLRGGGVRDLNADLLFGLPHQDLAQICQSTRQLLSLSPDRVALYGY 121

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA------ 261
                ++  +        LP     ++L+    +I    G     I N +  G       
Sbjct: 122 KHLP-SMIRRQAMIPSETLPKPEDRLELFQAASAICLEEGYEEIGIDNFARRGDGLTLAR 180

Query: 262 -----ESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
                +      +  Y D      IG+G  A SR   G  + A S  +    ++  +   
Sbjct: 181 DQSDLDKCLKRGFQGYSDDPAKVLIGLGASAISRFPQGYAQNAPSTAR----YMAAIDAG 236

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
             A         E Q    ++  L  R  I   
Sbjct: 237 SFATARGHLFQGEDQLRSRIIEALLCRFTIPRD 269


>gi|255524264|ref|ZP_05391223.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296185385|ref|ZP_06853795.1| hypothetical protein CLCAR_0808 [Clostridium carboxidivorans P7]
 gi|255512089|gb|EET88370.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296050219|gb|EFG89643.1| hypothetical protein CLCAR_0808 [Clostridium carboxidivorans P7]
          Length = 362

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 97/241 (40%), Gaps = 2/241 (0%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G+    + ++V    C   C +C+ N+           F ++ +   ++++ +    SI 
Sbjct: 2   GKNHYIIPIFVPHEGCPHNCVFCNQNTITGSSGKIDAEFTRNTIE--EYLKTIKRENSIV 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + F GGT + I  +     L    +         I +   P  ++       +   V+ 
Sbjct: 60  EVSFFGGTFTAISMEKQKEFLAVAKEYKEKGFIDLIHLSTRPDYIDDEILTNLKNYSVDV 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQSL+E+ L   GR H+  + + A +L +     +   ++  LP  T  +     +
Sbjct: 120 IELGVQSLDEEVLLKSGRGHSPEDVVKASNLIKEYGFVLGHQIMLGLPGDTFEKDIETTK 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +++    D   +Y   + K T   KM+K G         AV++  +   + +++ ++   
Sbjct: 180 KSILMKPDIYRIYPALVIKDTPMEKMYKSGMYKPYDLYEAVEISKVIYCMLTSNNINVIR 239

Query: 253 I 253
           I
Sbjct: 240 I 240


>gi|15895026|ref|NP_348375.1| BioB/LipA-like protein [Clostridium acetobutylicum ATCC 824]
 gi|15024718|gb|AAK79715.1|AE007684_3 BioB/LipA-like protein [Clostridium acetobutylicum ATCC 824]
 gi|325509163|gb|ADZ20799.1| BioB/LipA-like protein [Clostridium acetobutylicum EA 2018]
          Length = 358

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 2/241 (0%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           G+    + ++V    C   C +C+ N+          ++++S +    ++  +    +  
Sbjct: 2   GKSHYIIPIFVPHEGCPHDCVFCNQNTITGEESKVNGDYVKSTVE--DYLDTIPNKSATI 59

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I F GGT + I  +    +L        +     I +   P  ++       +   V+ 
Sbjct: 60  EISFFGGTFTAINIEKQKELLSVARHYKEIGKIKYIRLSTRPDYIDDEILTNLKNYSVDI 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQSL+ + L   GR H   + + A  L +     +   ++  LP     +     +
Sbjct: 120 IELGVQSLDSEVLLKSGRGHTKEDVVKASRLIKKYGFTLGHQIMLGLPGDNAEKDIETTR 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +    +   +Y   + K T   KM+  G          V++  +   +  A+ +    
Sbjct: 180 KVICMKPNICRIYPALVIKDTAMEKMYNRGIYKPYDIEECVEISKIVFGMLFANDIEVIR 239

Query: 253 I 253
           I
Sbjct: 240 I 240


>gi|225551724|ref|ZP_03772667.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia sp. SV1]
 gi|225371519|gb|EEH00946.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia sp. SV1]
          Length = 377

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 68/333 (20%), Positives = 126/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   + K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  LDFCLSRQDNLKFIFTSLFKYINLALLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E ++  I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLSILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+    ++          +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEEEDFVFR-------DFDNSIDSEKLWFYALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    Y+G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPYLGLGLRAVSLLFCNDKNN--NVRALIRKTGNFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S +   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSFRALRLRF 316


>gi|315927834|gb|EFV07159.1| radical SAM superfamily protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 288

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 115/248 (46%), Gaps = 18/248 (7%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +   S  +Y H PFC   CPYC F+ +     + +  + Q+   E++ M+        +S
Sbjct: 38  KQDKSYMLYAHVPFCHTFCPYCSFHKYYYDENLAKV-YFQNLREEIKIMKN--KGFDFTS 94

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++ GGG  +LI+ + +   L+   K + +    EI+ E++P+ ++ N    ++   ++R+
Sbjct: 95  MYVGGG-TTLIDEEELLKTLELCKKLFNIK---EISCESDPNHIDPNKLSMFKGI-IDRL 149

Query: 134 SLGVQSLEEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           S G+QS ++++L+ + R +   ++ E    I  A  I P  S DLI+ LP Q   Q   +
Sbjct: 150 SCGIQSFDDETLKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLND 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ A + A   ++ Y L     +   K +    L +  ++     Y + +     +    
Sbjct: 210 LEIAKNLAPQQITTYPLM---KSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYT--- 263

Query: 251 YEISNHSF 258
            + +  SF
Sbjct: 264 -QNNGWSF 270


>gi|119953434|ref|YP_945643.1| coproporphyrinogen oxidase, anaerobic [Borrelia turicatae 91E135]
 gi|119862205|gb|AAX17973.1| coproporphyrinogen oxidase, anaerobic [Borrelia turicatae 91E135]
          Length = 379

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 151/375 (40%), Gaps = 36/375 (9%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+       KC      S+V         F    L E+ +  ++ G   I +++ 
Sbjct: 7   TDLSIYIDL----TKC-----FSYV---------FFDKILQELSYYLKVLGSPQIKTLYI 48

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              T  L    ++   L  +++N+   +  E T E +P  + ++         V+RIS+ 
Sbjct: 49  KYETSGLGNDSDLESFLTSLSQNFDFLTLDEFTFELHPLEITLSLLAILNDFSVSRISID 108

Query: 137 VQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           ++S   + L+ +G    + +E   A++  R     ++ DL   +P Q       +L + +
Sbjct: 109 IKSFSSKLLKVMGVYEISVAEINNAVNGIRKFDFDLNIDLNVNIPYQEKMHLRNDLVKLV 168

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A +H+ L ++ ++         KD      +E  A D +        ++G   YEISN
Sbjct: 169 ACAPEHICLSEILVDGENCIIDFFKDVSSN-YNEAKAEDFWFYAFDFLESNGYMNYEISN 227

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HNL YW    Y+G+G  + S + +       ++ K  +++L +    G + 
Sbjct: 228 FALKGHESKHNLRYWELKPYLGLGVNSVSLLVISKGDGLKAVIKMDDNFLGV----GKST 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              E LS         +  L  ++G+ V   +        I  + +     FI  +    
Sbjct: 284 AAFEILSDLDFFICHFITNLGTKKGLEVSVLKRRF-----IYNQEDFCN--FINYL---- 332

Query: 376 LRCTQRGMTMLDSVI 390
           LR + +G+   + ++
Sbjct: 333 LRLS-KGVVFSNDIL 346


>gi|111115489|ref|YP_710107.1| HemN-related protein [Borrelia afzelii PKo]
 gi|110890763|gb|ABH01931.1| HemN-related protein [Borrelia afzelii PKo]
          Length = 377

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 72/335 (21%), Positives = 127/335 (37%), Gaps = 32/335 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIF------------NRILEELKYHLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLCRQDNLKFIFTSLSKYINLALLEEFTLEIIPGHVDFEKFKLLDEFYITRINLCVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E I   I+  R     ++ D+   +P Q  +  + +LQ  LSY
Sbjct: 114 SFSLKFRKIMGIPEISYEKINILINNIRKFPFDLNIDMSINMPLQKKSHLKFDLQELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFIYEE-------EDLALGNFNNSIESEKLWFCALECLESNGYINYEIANFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
             G ES HN   W+   Y+G+G  A S        + V   I K        V+ N H V
Sbjct: 227 LKGHESKHNKLNWKLKPYLGLGLHAVSLLFCNDKDNNVRALIRKDSG----FVKANNHLV 282

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             K  L          + GL   +G++++   +  
Sbjct: 283 TFK-LLEDLDFFIYHFIQGLGTIQGVNLRSLRLKF 316


>gi|20807915|ref|NP_623086.1| RNA polymerase II complex ELP3 subunit [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516483|gb|AAM24690.1| ELP3 component of the RNA polymerase II complex, consists of an
           N-terminal BioB/LipA-like domain and a C-terminal
           histone acetyltransferase domain (only BioB/LipA-like
           domain in Thermotoga) [Thermoanaerobacter tengcongensis
           MB4]
          Length = 354

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 102/252 (40%), Gaps = 11/252 (4%)

Query: 19  LGVYV-HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +++ HW  C  KC +C+ N    + K      ++  +  ++   +     S   + F 
Sbjct: 8   IPIFIPHW-GCSFKCVFCNQNLITGQKKDVT---VEEVIETIESHLKTIPEGSEVEVSFF 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+ + I  +   L L    +         I +   P  +     +  +K  V+ I LGV
Sbjct: 64  GGSFTGIPIEKQNLYLSIAREYLKRGQIQGIRLSTRPDYITEEILENLKKHDVSVIELGV 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+E+  L    R H + + + A++L R    ++   L+  LP  T  +      + +S 
Sbjct: 124 QSMEDDVLEKSRRGHTSEDVVNAVNLIRRYDFKLGLQLMIGLPGDTEEKSLNTAHKIVSL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D + +Y   + + T   KM+K+G     S   A+++      I    G+    I    
Sbjct: 184 KPDFVRIYPTLVIRNTYLEKMYKEGKYTPLSLEQAINISKKMYIIFVKAGIDVIRI---- 239

Query: 258 FLGAESLHNLNY 269
             G ++  N+N+
Sbjct: 240 --GLQTTDNINF 249


>gi|268608882|ref|ZP_06142609.1| ELP3 component of the RNA polymerase II complex [Ruminococcus
           flavefaciens FD-1]
          Length = 360

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 86/224 (38%), Gaps = 5/224 (2%)

Query: 15  GSNSLGVYV-HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             +++ +++ H   C  KC +CD N+      +   N ++   T  + + ++  P   + 
Sbjct: 2   KHSNISIFIPHI-GCPHKCSFCDQNTISGAQHLPDGNEVREICT--KALSEVKSPED-TE 57

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I F GG+ + I    +  +L+   +         I     P  +        +  GV  I
Sbjct: 58  IAFFGGSFTAIPRDYMLELLEAAHEFVGEGKFRGIRCSTRPDCINNEVLSLLKTYGVTAI 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG QS+ ++ L    R H A +   A  L R     +   ++  L K T       +++
Sbjct: 118 ELGAQSMSDKVLEANERGHTAEDVFNASRLIRQYGFELGLQMMIGLYKSTGDDEYETMEK 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            L    D + +Y + I +GT   ++ K G+  L         Y 
Sbjct: 178 ILEIHPDTVRIYPVVILRGTRLAELLKSGEYQLFGGANDEREYY 221


>gi|216263425|ref|ZP_03435420.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia afzelii ACA-1]
 gi|215980269|gb|EEC21090.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia afzelii ACA-1]
          Length = 377

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/335 (21%), Positives = 127/335 (37%), Gaps = 32/335 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINISFCCK-----DFSIF------------NRILEELKYHLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLCRQDNLKFIFTSLSKYINLALLEEFTLEIIPGHVDFEKFKLLDEFYITRINLCVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E I   I+  R     ++ D+   +P Q  +  + +LQ  LSY
Sbjct: 114 SFSLKFRKIMGIPEISYEKINILINNIRKFPFDLNIDMSINMPLQKKSHLKFDLQELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFIYEE-------EDLALGNFNNSIESEKLWFCALECLESNGYINYEIANFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
             G ES HN   W+   Y+G+G  A S        + V   I K        V+ N H V
Sbjct: 227 LKGHESKHNKLNWKLKPYLGLGLHAVSLLFCNDKDNNVRALIRKDSG----FVKANNHLV 282

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
             K  L          + GL   +G++++   +  
Sbjct: 283 TFK-LLEDLDFFIYHFIQGLGTIQGVNLRSLRLKF 316


>gi|212697461|ref|ZP_03305589.1| hypothetical protein ANHYDRO_02031 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675545|gb|EEB35152.1| hypothetical protein ANHYDRO_02031 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 187

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/175 (34%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 45  KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS 104
           +   E +I++ + E++  ++      I +I  GGGTPS ++ + I  I++ I K      
Sbjct: 4   ENRVEPYIKNLIKEIKLYQERLNI-EIDTIHIGGGTPSYVDAKYIEEIVNEIKKFKI-EK 61

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
             E TIE NP+S+       Y+  G+NRISLGVQS +++ L+ +GRNH A  A+  I + 
Sbjct: 62  IKEFTIECNPNSISKEKLAIYKDIGINRISLGVQSFDDEVLKEIGRNHTADIALKDIDMI 121

Query: 165 RNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           R+  F  +SFDL+  LP+QT    + EL      + +H+S   L +E+G+ FY +
Sbjct: 122 RDAGFDNLSFDLMLNLPRQTYKSVKNELAMVKKISPEHISWCSLILEEGSRFYAL 176


>gi|317057717|ref|YP_004106184.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
 gi|315449986|gb|ADU23550.1| Radical SAM domain protein [Ruminococcus albus 7]
          Length = 341

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 84/216 (38%), Gaps = 3/216 (1%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +++ ++V    C  KC +CD  +   + K+  +  ++     +Q + Q+      + I 
Sbjct: 2   HSNISIFVPHVGCPHKCAFCDQRTITGKQKLPHKEDVER--ACLQALGQVDDISD-TEIA 58

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GG+ + I  + +  +L    K         I +   P  +        +K GV  I L
Sbjct: 59  FFGGSFTAIPREYMLELLSAAYKFVGEGKFKGIRLSTRPDYINREVLDILKKYGVTSIEL 118

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS+ ++ L    R H A +   A  L R     +   ++  L K    Q +      +
Sbjct: 119 GAQSMSDEVLEANERGHTAEDVRQASRLIREYGFELGLQMMVGLYKSGHRQEDETFNEIM 178

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           +   D + +Y + I K T   ++   G+    S + 
Sbjct: 179 AIHPDTVRIYPVVILKHTRLAELLASGEYKPMSFDE 214


>gi|255029378|ref|ZP_05301329.1| coproporphyrinogen III oxidase [Listeria monocytogenes LO28]
          Length = 141

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKV 288
           ++   ++Y+L  +    HG   YEISN +  G +S HN+ YW    Y G G GAH  V  
Sbjct: 2   QDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAHGYVGN 61

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
             +     I+K    +++ +++N     +++ L+ +++ +E + +GLR  +G+  K ++ 
Sbjct: 62  TRYSNFGPIKK----YMEPLQENILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKHFKQ 117

Query: 349 LAGRNLDIECERNLQRQ 365
             G++LD      +Q+Q
Sbjct: 118 KFGQDLDATFANAIQKQ 134


>gi|218678613|ref|ZP_03526510.1| coproporphyrinogen III oxidase [Rhizobium etli CIAT 894]
          Length = 244

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 88/210 (41%), Gaps = 3/210 (1%)

Query: 55  FLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
              E++ +  Q+    S+  + FGGG+P+++   +   +++ +   + +     I +E +
Sbjct: 2   LREEIRLVAEQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVD 61

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPRMS 172
           P +   +  +   + GVNR S+GVQS +    + + R  + ++ + A+  L  +   R++
Sbjct: 62  PRTFTTDMAEALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLHGVRRIN 121

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL++ LP QT+         A++   D L+++  +    +            LP     
Sbjct: 122 FDLMFGLPNQTVQSCLESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAAR 180

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +  +       A       + + +    E
Sbjct: 181 AEQASAMADTLVAARYLQIGLDHFALPDDE 210


>gi|269216970|ref|ZP_06160824.1| radical SAM domain protein [Slackia exigua ATCC 700122]
 gi|269129777|gb|EEZ60861.1| radical SAM domain protein [Slackia exigua ATCC 700122]
          Length = 474

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 14/227 (6%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC + CP+C FN + R  +     + +S   EM  ++ L        ++ GGGT
Sbjct: 40  LYMHVPFCQRLCPFCSFNRY-RFDEKVARPYFESMRKEMLMLKDL--GYDFHDLYIGGGT 96

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+++    +   +D     + +     +  E NP+ +        R   V R+S+GVQS 
Sbjct: 97  PTIM-LDELCETIDLARDAFHIED---VGTETNPNHLAQPYLDKLRGR-VQRLSVGVQSF 151

Query: 141 EEQSLRFLGRNH---NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ + R     +  E +  I  A   F  ++ D+I+  P QT      +L++  + 
Sbjct: 152 DDGLLKQMDRYKKYGSGDEILERIAEAIPYFDSLNVDMIFNFPSQTEEILISDLEKIATC 211

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                +   L +   T          L     +     Y+L   + +
Sbjct: 212 GCRQTTFSPLYVSSATT---RKMTETLGSMDYDRERRYYHLIDGVLA 255



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 8/117 (6%)

Query: 272 YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
              Y  IG G+ S +    +    SI    E + + +      ++ K  + +        
Sbjct: 325 CEQYPAIGSGSISCLDGCIYVNTFSI----EEYNEAIAAGRMPLMGKSRMGARDLMRYRF 380

Query: 332 MMGLRLREGISVKDWEMLAGRNLD--IECERNLQR-QGFIERVQFSRLRCTQRGMTM 385
           ++ L  +  +  + ++   G +++  +  E    R  G         L  T +G  +
Sbjct: 381 LLQL-YQLRLDKRQFKRDFGISIERGLPAEMAFMRLNGAFATDDEEELTLTPKGRYL 436


>gi|289807915|ref|ZP_06538544.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 154

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 12/163 (7%)

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW 270
             TLF          LP ++   D++     + +A G   YE S ++  G +  HNLNYW
Sbjct: 1   PNTLFGSRPPV----LPDDDALWDIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYW 56

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADE 329
           R+GDY+GIG GAH +V     R+  + + +HP  +++     G  +  +  +S + +  E
Sbjct: 57  RFGDYLGIGCGAHGKVTFPDGRILRTTKTRHPRGYMQ-----GRYLESQRDVSDDDKPFE 111

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLDI--ECERNLQRQGFIER 370
           F M   RL E     ++    G    +  +       QG++  
Sbjct: 112 FFMNRFRLLERAPRAEFVDYTGLTEAVIRQPIDEAIAQGYLTE 154


>gi|222100438|ref|YP_002535006.1| hypothetical protein CTN_1464 [Thermotoga neapolitana DSM 4359]
 gi|221572828|gb|ACM23640.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 319

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C K+C +CD      + KV       S     Q + + +       + F G
Sbjct: 4   IPVFLPYAGCRKRCVFCDQVKATGQVKVP------SLDDIAQLIEEYSKTSKEYELGFYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  Q +   L  + +   V S   I I   P  V V   +  +K  V  I +GVQ
Sbjct: 58  GTFTGLSEQKMEEYLSFVRRFPVVKS---IRISTRPDEVTVEKLEILKKYDVETIEVGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L + +  R+S  L+  LPK +     +   R +   
Sbjct: 115 SFSDEVLEASKRGYTSDEAEKACKLIKKMGFRLSVHLMVGLPKSSREGEILSALRTIECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M +           A+D+ +    I    G+    I  H
Sbjct: 175 ADLVRIHPTLVFEGTELHRMMEASQYSPLDLEEAIDICSDLVCILEGWGVRVIRIGYH 232


>gi|289578460|ref|YP_003477087.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289528173|gb|ADD02525.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 354

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 101/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   + +   E  ++     ++   +     +   + F G
Sbjct: 8   IPIFIPHLGCPFKCVFCNQNSITGQQREITEEEVR---QTIESHLKTLPRDAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I        L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDMQNFYLGIAKEYLDKGKIDAIRLSTRPDYIDTKILQNLKRYQVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + + A++L R    ++   ++  LP   + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMVGLPGDNLEKSLNTAYKIVKLK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G  +  +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPTLVIKNTYLERMYKEGRFLPLTLQEAVEISKKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|325115481|emb|CBZ51036.1| putative radical SAM domain containing protein [Neospora caninum
           Liverpool]
          Length = 825

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 67/348 (19%), Positives = 121/348 (34%), Gaps = 84/348 (24%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN-----------------------------SHVRRYKVGQ 48
              VY+H PFC+K+C +C F                              S   ++   +
Sbjct: 106 PRAVYIHMPFCMKRCHFCAFPVTLLPATPRYPPGSGSRPPDSQPRTGNFCSLSTKHDSSE 165

Query: 49  ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL---DGIAKNWTVSSN 105
                      + +          SI+FGGG+PSLI P+ +  +L   +  A +   S+ 
Sbjct: 166 PRTTSFRQGRCRDVSADLSKSFFRSIYFGGGSPSLIPPRLLQRVLAVLETEAHSLERSTT 225

Query: 106 VEIT---------IEANPSSV--------EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +          ++ NP S            + +   + GV R S+GVQ+ ++  L+ L
Sbjct: 226 RGVPSSAVACRGRVQPNPLSTRLCIGTIDSKEHLEELAELGVTRFSVGVQTFDDTILKRL 285

Query: 149 GRNHNASEAIAAIHLARNI-------FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           GR+++ +  +  + L   I         ++S      L  Q   Q   +L   + +  +H
Sbjct: 286 GRSNDRAANVRVLRLLSEIVREYARRGRKLSVSTDILLSFQRRDQLLEDLSWLVHHEFEH 345

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
             +        + F ++    D     ++               +     EI      G 
Sbjct: 346 YEI--------SSFARIDHHNDNSSYPKDTC------------DNVFKRQEIEQ----GY 381

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
             LH+  YWR   + G G GA S V +       +     E++L+ VR
Sbjct: 382 RCLHHEAYWRSEPFFGFGMGASSFVNLHR----WTRPNRLEAYLEWVR 425


>gi|302874773|ref|YP_003843406.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690612|ref|ZP_07633058.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302577630|gb|ADL51642.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 349

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 95/235 (40%), Gaps = 2/235 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+ N+     +V  + F+++ +   +++  +    S   + F G
Sbjct: 8   IPIFVPHEGCPHNCVFCNQNTITGNSEVIDDKFVRNTIE--EYIETIDINNSTIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I+ +    +L    +         I +   P  +  +  +  R   V+ I LGVQ
Sbjct: 66  GTFTAIDIEKQRQLLAVAKEYKEKKLIKYIRLSTRPDYINHDILEHLRSYKVDIIELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L+  GR HN  + + A  L +     +   ++  LP  T  +     ++ +   
Sbjct: 126 SLDDEVLKKSGRGHNEKDVVFASRLIKEYGFTLGLQVMVGLPGDTEEKDIKTAEKIIEMK 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + +Y   +   T    M K G     +   AV++  +   +   + ++   I
Sbjct: 186 PTLVRIYPSLVITNTPMETMFKQGIYEPYTLEKAVEISKVIYKMFLKNNINVIRI 240


>gi|323705470|ref|ZP_08117045.1| Radical SAM domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535372|gb|EGB25148.1| Radical SAM domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 354

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 91/235 (38%), Gaps = 3/235 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +          E +++     ++   +     +   + F G
Sbjct: 7   IPIFVPHLGCPHKCVFCNQDEITGLKSKVNEEYVE---RTIEDYLKTIPKNAHIEVSFYG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I  +     L  + K   + S   I +   P  ++       ++ GV+ I LGVQ
Sbjct: 64  GSFTGIPLETQKKFLSIVQKYLILGSIDAIRLSTRPDYIDEVILDNLKRYGVSIIELGVQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++ + L    R H+A +   A  L +     +   ++  LP     +      + +S  
Sbjct: 124 SMDNEVLLKSHRGHSAVDVFRASELIKEYGFTLGLQIMIGLPGDNRQKLLETADKIISLR 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + +Y   + KGT   KM+K+G  +  S   AV++          + +    I
Sbjct: 184 PAFVRIYPTLVLKGTYLEKMYKNGMYMPISLEDAVEISKELYIKFKKNHIDVIRI 238


>gi|207109979|ref|ZP_03244141.1| coproporphyrinogen III oxidase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 139

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +Y+H PFC  KC YC FNS+  ++ + +E + Q+   +++     T    I SIF GGGT
Sbjct: 3   LYIHIPFCENKCGYCAFNSYENKHGL-KEEYTQALCLDLRHALSQT-DEPIESIFIGGGT 60

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P+ +  ++   I + I  +  +S + EIT EANP  +     QG +  G+NR+SLGVQS 
Sbjct: 61  PNTLSVESFERIFESIHHHANLSMDCEITTEANPELISKAWCQGLKDLGINRLSLGVQSF 120

Query: 141 EEQSLRFLGRNHNASEA 157
            E  L FL R H  + A
Sbjct: 121 REDKLLFLERQHPKNIA 137


>gi|51598911|ref|YP_073099.1| HemN-related protein [Borrelia garinii PBi]
 gi|51573482|gb|AAU07507.1| HemN-related protein [Borrelia garinii PBi]
          Length = 377

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 67/337 (19%), Positives = 130/337 (38%), Gaps = 36/337 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G   I +++   
Sbjct: 11  LSLYINMSFCCK-----DFSIF------------NRILGELKYYLTLLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   ++   E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VNFCLCRQDSLKFIFTSLSKYINLALLEEFTLEIIPGYVDFEKFKLLDEFCITRINLSVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E I   I   R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLKFRKIMGIPEISYEKINILIKNIRKFSFDLNIDMTINIPFQKKSDLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEIS 254
             +H+       E+           DL L   +  +D    +        ++G   YEI+
Sbjct: 174 IPEHICFSDFICEE----------QDLTLRDFDSGIDSEKLWFYALEYLESNGYINYEIT 223

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWLKMVRKNGH 313
           N    G ES HN   W    Y+G+G  A S +     +    ++ +    ++K      +
Sbjct: 224 NFMLKGHESKHNKLNWELKPYLGLGLHAVSLLFCNDKNNNVRALIRKDSGFVKA----SN 279

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            + + E L   +      + GL   +G++++   +  
Sbjct: 280 HLAKFELLEDLEFFIYHFIQGLGTIQGVNLRSLRLRF 316


>gi|218458183|ref|ZP_03498274.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 241

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 88/210 (41%), Gaps = 3/210 (1%)

Query: 55  FLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
              E++ +  Q+    S+  + FGGG+P+++   +   +++ +   + +     I IE +
Sbjct: 2   LREEIRLVAEQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAIEVD 61

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMS 172
           P +   +  +   + GVNR S+GVQS +    + + R  + ++ + A+   R     R++
Sbjct: 62  PRTFTTDMAEALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRIN 121

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           FDL++ LP QT+         A++   D L+++  +    +            LP     
Sbjct: 122 FDLMFGLPNQTVQSCLESAMFAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAAR 180

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +  +       A G     + + +    E
Sbjct: 181 AEQASAMADTLVAAGYLQIGLDHFALSDDE 210


>gi|261152|gb|AAB24393.1| anaerobic coproporphyrinogen III oxidase [Rhodobacter sphaeroides]
          Length = 305

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 101/299 (33%), Gaps = 32/299 (10%)

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSF 173
             V+    +   + G+NR S+G+Q   +     +GR        A +   R      ++ 
Sbjct: 1   MMVDEPKIRALSEEGMNRASIGIQDFTDIVQNAIGREQPFENTKACVQSVRRYGVHSLNT 60

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           DL+Y LP Q        + + LS   D ++++        +  +     + VLP +    
Sbjct: 61  DLVYGLPHQNRESLAATIDKVLSLRPDRVAIFGYAHVP-WMAKRQKLIDETVLPPDIERH 119

Query: 234 DLYNLTQSITSAHGLHAYEISNHSFLG------AESLH-NLNYWRYGD-----YIGIGPG 281
           +L NL   + +  G     I + +         A S     N+  Y D      +GIG  
Sbjct: 120 ELANLAARLFTEGGFERIGIDHFALPDDSMAVAARSRKLRRNFQGYTDDTCPTLLGIGAS 179

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ----QADEFLMMGLRL 337
           + S+ + G  +   +      +++K + +          ++ E     +A E +M    L
Sbjct: 180 SISKFEQGYLQNTAAT----AAYIKSIEEGRLPGYRGHRMTEEDYLHGRAIEMIMCDFFL 235

Query: 338 REGISVKDWEMLAGRNLDIECERNLQRQG-----FIERVQFSRLRCTQRGMTMLDSVIA 391
                +       G   +     + +R G     F+       +   + G  +   +  
Sbjct: 236 ----ELPALRARFGEPAETMVLAH-RRSGREVTPFVTVDADGSMSIAKEGRALARMIAR 289


>gi|307297877|ref|ZP_07577681.1| Coproporphyrinogen dehydrogenase [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915963|gb|EFN46346.1| Coproporphyrinogen dehydrogenase [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 411

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 75/397 (18%), Positives = 150/397 (37%), Gaps = 48/397 (12%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +S G+Y+H PFC + C +C +N      K+        +LT ++   +L      SSI+
Sbjct: 29  DSSPGLYIHVPFCPEFCSFCPYNKIKYDSKL-----TNKYLTALKRESELQRVGQFSSIY 83

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            GGGTPS         +L G+  ++   ++ EI +E +P+ V     +  R+ GVN +SL
Sbjct: 84  IGGGTPSY-----DLDLLKGVVSHFREMTDGEIALEIHPADVSSKRLEEIRETGVNFVSL 138

Query: 136 GVQSLEEQSLRFLG-RNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQR 193
           G+QS ++ +L  +G R  ++  ++ +I    +  F  +  DLI+    +   +   +L+ 
Sbjct: 139 GIQSFDDFTLNSMGRRRQDSVVSLNSIAATTSAGFDFVDVDLIFDYQLE-RRRIVEDLET 197

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           A+SY  + +S+Y +     T +       +    +L             +          
Sbjct: 198 AISYGPEQVSVYPMMRFADTAYKNTKNDPEKELEILEELENVALSKGYIRDSL-WTFKKR 256

Query: 251 YEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
            E   +S +  E            ++GIG  A S           S     + +   +  
Sbjct: 257 NEGRKYSSVSREF-----------FLGIGTSASSFNGKEFRTNTFS----LDEYYSFLDS 301

Query: 311 NGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFI 368
               V +   +        +    L     + ++  E   GR          +   +G+ 
Sbjct: 302 GKLPVSKTIKMVKFSAILYYSFWAL-YGGQLDLRRLEEHFGRLPVRMRYLLHSAIARGYF 360

Query: 369 ERVQFSRLRCTQRGMT------------MLDSVIANL 393
           +R +   ++ T+ G               +D + ++L
Sbjct: 361 QR-EEGIVKPTRIGTRKLHIVEEWLTYSFIDRIWSDL 396


>gi|312897518|ref|ZP_07756938.1| radical SAM protein family [Megasphaera micronuciformis F0359]
 gi|310621370|gb|EFQ04910.1| radical SAM protein family [Megasphaera micronuciformis F0359]
          Length = 349

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 87/239 (36%), Gaps = 5/239 (2%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            ++ + V++    C  +C +CD ++   + +V       +      + R+      ++  
Sbjct: 2   KTSIIPVFIPHLGCPHRCVFCDQHTVTGQAEVPTGA--DTAQKIATYTRKKGAAYEVA-- 57

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GG+ + +       +L    +         I     P  ++       ++ GV  + 
Sbjct: 58  -FYGGSFTAVSATLQEELLQPAYEALQNGLVSAIRCSTRPDCIDDEVLNRLKRYGVRTVE 116

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS++++ L+   R H + +   A+ L +     +   L+  LP +  T      +  
Sbjct: 117 LGVQSMDDRVLQAAKRGHTSEDVYRAVSLLKKSGFTIGLQLMPGLPGEDWTSLTATTEAV 176

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +   D   +Y + +   T    M++ G     + + AV      + +   H +     
Sbjct: 177 CNLEPDFTRIYPVVVIANTELEDMYRRGHYEPLTIDEAVRRSAYMKELFLRHHIPCIRT 235


>gi|224534457|ref|ZP_03675033.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia spielmanii A14S]
 gi|224514134|gb|EEF84452.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia spielmanii A14S]
          Length = 377

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/345 (20%), Positives = 132/345 (38%), Gaps = 34/345 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E+++   L G  +I +++   
Sbjct: 11  LSLYINMSFCCK-----DFSIF------------NRILEELKYHLTLLGHPTIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    ++  I   ++K   +    E T+E  P  V+   F+   +  + RI+LGVQ
Sbjct: 54  LDFCLCSQNDLKFIFTSLSKYINLPLLEEFTLEMIPGYVDFEKFKFLDEFCITRINLGVQ 113

Query: 139 SLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S   +  + + R    +  +    I+  R     +S D+   +P QT +  + +L+  L 
Sbjct: 114 SFSLKFRKIM-RIPEISYEKMNILINNIRKFPFDLSIDMTINMPLQTKSYLKFDLKELLL 172

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           Y  +H+       E+     +          +   +  L+        ++G   YEI+N 
Sbjct: 173 YMPEHICFSDFICEEEGFILR-------DFNNSIDSEKLWFYALECLESNGYINYEITNF 225

Query: 257 SFLGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVRKNGHA 314
           +  G ES HN   W    Y+G+G  A S       ++ V   I K        V+ N + 
Sbjct: 226 ALKGHESKHNKLNWELKPYLGLGLHAVSLLFCNDKNNNVRALIRKDSG----FVKANNYP 281

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECE 359
           V  K  +   +      + GL   +G++++   +    N +   +
Sbjct: 282 VTFK-LIEDLEFFIYHFIQGLGTIQGVNLRSLRLKFEYNEEQFFQ 325


>gi|297544736|ref|YP_003677038.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842511|gb|ADH61027.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 354

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 9/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  KC +C+ NS   R +   E  ++     ++   +     +   + F G
Sbjct: 8   IPIFIPHLGCPFKCVFCNQNSITGRQREITEEEVR---QTIESHLKTLPRDAEIEVSFFG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I        L    +         I +   P  ++    Q  ++  V+ I LGVQ
Sbjct: 65  GSFTGIPQDMQNFYLGIAKEYLDKGKIDAIRLSTRPDYIDTKILQNLKRYQVSIIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++E+ L    R H + + + A++L R    ++   ++  LP+  + +      + +   
Sbjct: 125 SMDEEVLLKSRRGHTSEDVVKAVNLIRQYDFKLGLQIMIGLPEDNLEKSLNTAYKIVELK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + K T   +M+K+G  +  +   AV++      I   + +    I     
Sbjct: 185 PDFVRIYPTLVIKDTYLERMYKEGRFLPLTLQEAVEISKKMYIIFIKNNIDVIRI----- 239

Query: 259 LGAESLHNLNY 269
            G ++  N+NY
Sbjct: 240 -GLQTTENINY 249


>gi|170758735|ref|YP_001787765.1| radical SAM domain-containing protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169405724|gb|ACA54135.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 363

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+ +     + ++  EN+I+  +    +++ +    S   I
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQHKITGEKGEIVDENYIRETIE--AYIKTIDRENSTLEI 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       +K   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|203288088|ref|YP_002223103.1| HemN-related protein [Borrelia recurrentis A1]
 gi|201085308|gb|ACH94882.1| HemN-related protein [Borrelia recurrentis A1]
          Length = 379

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 125/338 (36%), Gaps = 30/338 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             L +Y+            DF    SH+   KV +E         + +  ++ G   + +
Sbjct: 7   KELSIYI------------DFSKCFSHIFYEKVFRE---------LSYYLEVLGFPKVKT 45

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++       L++   +   L  ++  +      E T E +P ++  +         V+RI
Sbjct: 46  LYIKYNDLRLVDVFELKSFLTSLSAKFNFFDLDEFTFELHPGNITTSVLTVLDNFFVSRI 105

Query: 134 SLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SL ++S   + L  +G    +  +  AAI         ++ D    +     T  + +L 
Sbjct: 106 SLDIKSFSSKFLEKIGIFGVSIDKVNAAIENIHQFHFDLNIDFDINILYHNKTNLKSDLV 165

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +SYA +H+SL ++ I+K         D              +        +HG   YE
Sbjct: 166 KVISYAPEHISLSEVLIDKNNCIVDSSSDAYSDYNDIRGEDLWF-YAFDFLESHGYLNYE 224

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G E  HN+ YW    Y+G+G  A S + V  +    ++ +  +++L  V  + 
Sbjct: 225 ISNFALRGYECKHNVRYWELSPYLGLGLQAVSLLFVSENNGLRAVIRKDDNFLYSVESS- 283

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                 E LS         +  L  + G+ +       
Sbjct: 284 ---ATFENLSDLDFFIYHFITNLGTKRGLDISILRRRF 318


>gi|170757628|ref|YP_001781996.1| radical SAM domain-containing protein [Clostridium botulinum B1
           str. Okra]
 gi|169122840|gb|ACA46676.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
          Length = 363

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 91/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+       + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       ++   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|28210931|ref|NP_781875.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
 gi|28203370|gb|AAO35812.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           tetani E88]
          Length = 351

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 94/239 (39%), Gaps = 9/239 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF----IQSFLTEMQWMRQLTGPRSISSI 74
           + ++V    CV  C +C+ NS     +V  + +    I+++L  +   ++     +I  +
Sbjct: 8   IPIFVPHEGCVHNCVFCNQNSITGISEVIDDKYTKDTIETYLQTINKTQE-----TIIEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GG+ + I+      +L    +         I +   P  ++       +   V+ I 
Sbjct: 63  SFFGGSFTAIDINKQKRLLKVAKEYKEKGLIDFIRLSTRPDYIDDAILTNLKDYKVDIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+E+ L+   R H+  +   A  L       +   ++  LP  +  +      + 
Sbjct: 123 LGVQSLDEEVLKKSARGHSEKDVKEASKLIHEYGFTLGHQVMLGLPGDSFEKDIKTALKV 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +        +Y   + K T   KM+K+G     +   AV++     +I + + +    I
Sbjct: 183 IEMKPKICRIYPALVIKNTPMEKMYKEGVYQPYTLEEAVEISKELYNIFTENNIEVIRI 241


>gi|284048720|ref|YP_003399059.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952941|gb|ADB47744.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 332

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 5/227 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +++    C   C +C+  +            +     +M+ +     P   + + F G
Sbjct: 3   LPIFIPHAGCPHLCSFCNQRTISGEGDSS----LAGARRQMENLLGWVRPDPANELAFYG 58

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + ++P     +LD             + +   P ++        R   V  I LG Q
Sbjct: 59  GSFTALDPDRQEALLDLAETWRGQGLCGPLRLSTRPDAITPEILDRLRAHQVETIELGAQ 118

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L    R H A++   A  L R    R+   L+  LP Q     E    + L+  
Sbjct: 119 SLDDRVLELARRGHTAAQVRTASRLIRQGGFRLGLQLMTGLPGQDGPSLEDTKAQVLALH 178

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD-LYNLTQSITS 244
            D + +Y + + +GTL     + G     +   AVD  + L +  T+
Sbjct: 179 PDLVRIYPVLVIEGTLLADQWRQGAYRPQTVEEAVDACWPLYRDFTA 225


>gi|168184660|ref|ZP_02619324.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|182672268|gb|EDT84229.1| radical SAM domain protein [Clostridium botulinum Bf]
          Length = 363

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+ +     + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQHKITGEKNEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       +K   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKNKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|148270762|ref|YP_001245222.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147736306|gb|ABQ47646.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
          Length = 317

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 91/238 (38%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C ++C +CD      + KV     +      ++   + +    +    F G
Sbjct: 4   IPVFLPYAGCKRRCVFCDQIKATGQTKVPS---LDDIARIIEEYSRTSNEYELG---FYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  + +   L  +     V S   I +   P  +     +  +K GVN I +GVQ
Sbjct: 58  GTFTGLSEEQMEEYLRFVKGFPVVKS---IRVSTRPDEINERKLKILKKYGVNVIEVGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP        +   R +   
Sbjct: 115 SFLDEVLEKSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M K+          AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDLVCILEGWGTKVIRIGYH 232


>gi|148380411|ref|YP_001254952.1| radical SAM domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|148289895|emb|CAL84003.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC
           3502]
          Length = 363

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 91/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+       + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       ++   + I 
Sbjct: 63  SFFGGTFTGIPIEKQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|168180665|ref|ZP_02615329.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|226949807|ref|YP_002804898.1| radical SAM domain-containing protein [Clostridium botulinum A2
           str. Kyoto]
 gi|182668541|gb|EDT80520.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|226842528|gb|ACO85194.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|322806719|emb|CBZ04288.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum H04402 065]
          Length = 363

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+ +     + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       ++   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|163785544|ref|ZP_02180119.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
 gi|159879188|gb|EDP73117.1| oxygen-independent coproporphyrinogen III oxidase [Hydrogenivirga
           sp. 128-5-R1-1]
          Length = 165

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 12/177 (6%)

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
           M  D    LP E     ++ L  +   + G + YE+SN +  G +  HNL YW    ++G
Sbjct: 1   MVLDNKYNLPDEETTTQMFKLIDNYLESKGFYRYELSNWAKNGFKCKHNLFYWTDQYFLG 60

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
           IG  A S +            K+   + +MV K    V  +E LS E    E +M+GLRL
Sbjct: 61  IGVSAWSYIGNKRFGNT----KNLTEYFEMVYKGEKPVKFRETLSEEDSRFEKIMLGLRL 116

Query: 338 REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +EGI V   +         E  + L+++GF   ++ ++   TQ G+ +++ +I  L 
Sbjct: 117 KEGIDVNFIKNK-------EILKELEKEGF-GIIKENKFSLTQDGLMLINQIITKLF 165


>gi|294687|gb|AAB07743.1| coproporphyrinogen III oxidase [Rhizobium etli]
          Length = 251

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 83/199 (41%), Gaps = 2/199 (1%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +    S+  + FGGG+P+++   +   +++ +   + +     I +E +P +   +  + 
Sbjct: 1   MPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAVEVDPRTFTTDMAEA 60

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQT 183
             + GVNR S+GVQS +    + + R  + ++ + A+   R     R++FDL++ LP QT
Sbjct: 61  LERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRRINFDLMFGLPNQT 120

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +         A++   D L+++  +    +            LP      +  +      
Sbjct: 121 VQSCLESAMLAIAMRPDRLAVFGYSHVP-SFRKNQRLIDTAALPDIAARAEQASAMADTL 179

Query: 244 SAHGLHAYEISNHSFLGAE 262
            A G     + + +    E
Sbjct: 180 VAAGYLQIGLDHFALPDDE 198


>gi|153939570|ref|YP_001391752.1| radical SAM domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|152935466|gb|ABS40964.1| radical SAM domain protein [Clostridium botulinum F str. Langeland]
 gi|295319776|gb|ADG00154.1| radical SAM domain protein [Clostridium botulinum F str. 230613]
          Length = 363

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+ +     + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQHKITGEKNEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       +K   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEYMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|153933832|ref|YP_001384629.1| radical SAM domain-containing protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934827|ref|YP_001388146.1| radical SAM domain-containing protein [Clostridium botulinum A str.
           Hall]
 gi|152929876|gb|ABS35376.1| radical SAM domain protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152930741|gb|ABS36240.1| radical SAM domain protein [Clostridium botulinum A str. Hall]
          Length = 363

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 91/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+       + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       ++   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+++ L   GR H+  E   A  L R     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M K G     + + A+D+  L  S+     +    I
Sbjct: 183 LEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI 241


>gi|237740803|ref|ZP_04571284.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422820|gb|EEO37867.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 348

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I  +     L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMELQKQYLEVVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR+++      +  L +     +   L+  LPK       M   ++L  
Sbjct: 122 QSLDDEVLKATGRHYDYEIVKKSCDLIKKYGFTLGVQLMIGLPKSDFKSDLMSAVKSLDL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       +   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKRNLYNSLTLEEAVDRTVPIYSLLELKDINVIRV 237


>gi|294782047|ref|ZP_06747373.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480688|gb|EFG28463.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
          Length = 342

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I  +     L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMELQKQYLEVVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR++N      +  L +     +   L+  LPK       M   ++L  
Sbjct: 122 QSLDDEVLKATGRHYNYEIVKKSCDLIKKYGFTLGVQLMIGLPKSDFKSDLMSAVKSLDL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       +   AV+      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKRNLYNSLTLEEAVNRTVPIYSLLELKDINVIRV 237


>gi|203284554|ref|YP_002222294.1| HemN-related protein [Borrelia duttonii Ly]
 gi|201083997|gb|ACH93588.1| HemN-related protein [Borrelia duttonii Ly]
          Length = 379

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 126/338 (37%), Gaps = 30/338 (8%)

Query: 17  NSLGVYVHWPFCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
             L +Y+            DF    SH+   KV +E         + +  ++ G   + +
Sbjct: 7   KELSIYI------------DFSKCFSHIFYEKVFRE---------LSYYLEVLGFPKVKT 45

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           ++       L++   +   L  ++  +      E T E +P ++  +         V+RI
Sbjct: 46  LYIKYNDLRLVDVFELKSFLTSLSAKFNFFDLDEFTFELHPGNITTSVLTVLDNFFVSRI 105

Query: 134 SLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           SL ++S   + L  +G    +  +  AAI         ++ D    +     T  + +L 
Sbjct: 106 SLDIKSFSSKFLEKIGIFGVSIDKVNAAIENIHQFHFDLNIDFDINILYHNKTNLKSDLV 165

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +SYA +H+SL ++ I+K         D              +        +HG   YE
Sbjct: 166 KVISYAPEHISLSEVLIDKNNCIVDSSSDAYSDYNDIRGEDLWF-YAFDFLESHGYLNYE 224

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
           ISN +  G E  HN+ YW    Y+G+G  A S + V  +    ++ +  +++L  V  + 
Sbjct: 225 ISNFALRGYEGKHNVRYWELSPYLGLGLQAVSLLFVSENNGLRAVIRKDDNFLYSVESS- 283

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
                 E LS         +  L  ++G+ +       
Sbjct: 284 ---ATFENLSDLDFFIYHFITNLGTKQGLDISILRRRF 318


>gi|158320492|ref|YP_001512999.1| radical SAM domain-containing protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140691|gb|ABW19003.1| Radical SAM domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 342

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 92/242 (38%), Gaps = 9/242 (3%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +G   + +++    C   C +C+          V  E  ++    +++ ++ +  P+ I+
Sbjct: 3   KGKIIIPIFIPHRGCPHDCSFCNQKKIAGIGTDVTAEQVLEIIEAQLEHLKDVNRPKEIA 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
              F GG+ + +  +    +L    +   ++   +I I   P  +     Q     GV+ 
Sbjct: 63  ---FYGGSFTGLPYEQQRQLLAMAYEKKKLNFIQDIRISTRPDYINEEILQLLGSYGVSI 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQS +   L    R H+  +   A  L +    ++   ++  L   T  +     +
Sbjct: 120 IELGVQSTDPTVLELNNRGHSKEDVYRAAALIKKQNIQLGLQMMVGLYGDTKEKMLRTAR 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +    D + +Y   I + TL  K++++G     S + AV L               Y+
Sbjct: 180 DIIDCTPDFVRIYPTIIIQDTLLEKLYREGKYKPISLDEAVYLCKELV-----LEFDQYQ 234

Query: 253 IS 254
           I 
Sbjct: 235 IP 236


>gi|237741210|ref|ZP_04571691.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256846346|ref|ZP_05551803.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|229430742|gb|EEO40954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256718115|gb|EEU31671.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
          Length = 348

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 85/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+       +  L ++    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPKSDYKSDLQSAIKSLEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKKNLYQSLSIEEAVDRTVSIYSLLKLKNINVIRV 237


>gi|34764314|ref|ZP_00145148.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27885914|gb|EAA23256.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 320

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 85/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+       +  L ++    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPKSDYKSDLQSAIKSLEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKKNLYQSLSIEEAVDRTVSIYSLLKLKNINVIRV 237


>gi|170289492|ref|YP_001739730.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|170176995|gb|ACB10047.1| Radical SAM domain protein [Thermotoga sp. RQ2]
          Length = 317

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C ++C +CD      + KV     +      ++   + +    +    F G
Sbjct: 4   IPVFLPYAGCKRRCVFCDQIKATGQTKVPS---LDDIARIIEEYSRTSNEYELG---FYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  + +   L  + +   V S   I +   P  +     +  +K GVN I +GVQ
Sbjct: 58  GTFTGLSEEKMEEYLRFVKRFPVVKS---IRVSTRPDEINERKLKILKKYGVNVIEIGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP        +   R +   
Sbjct: 115 SFLDEVLERSKRGYTSEEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M ++G+    +   AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDICSDLVCIFEGWGTKVIRIGYH 232


>gi|281413068|ref|YP_003347147.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|281374171|gb|ADA67733.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 317

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C K+C +CD      + KV     +      ++   + +    +    F G
Sbjct: 4   IPVFLPYAGCKKRCVFCDQIKATGQTKVPS---LDDIARIIEEYSRTSNEYELG---FYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  + +   L  +     V S   I +   P  +     +  +K GVN I +GVQ
Sbjct: 58  GTFTGLSEEQMEEYLRFVKGFPVVKS---IRVSTRPDEINERKLKILKKYGVNVIEVGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP+       +   R +   
Sbjct: 115 SFLDEVLERSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPRSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M K+          AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDLVCILEGWGTKVIRIGYH 232


>gi|296328080|ref|ZP_06870614.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154856|gb|EFG95639.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 85/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISINLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+       +  L ++    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPKSDFKSDLQSAMKSLDL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AV+      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKKNLYQSLSIEEAVERTVPIYSLLELKNINVIRV 237


>gi|19703498|ref|NP_603060.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713586|gb|AAL94359.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+       +  L ++    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYDIVKKSCDLIKSYGFELGVQLMIGLPKSDFKSDLQSAIKSLDL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       +   AV+      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKKNLYQSLTVEEAVERTVPIYSLLELKNINVIRV 237


>gi|323141210|ref|ZP_08076111.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414353|gb|EFY05171.1| radical SAM domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 336

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 91/235 (38%), Gaps = 4/235 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +++    C  +C +C+  +   +         +         R    P  ++   F G
Sbjct: 4   LPIFIPHAGCPHQCVFCNQKTISGQKLAAVAGAKEQLARW----RSWLRPSVVNEAAFYG 59

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + +  +    +L              + +   P  ++    Q  +  GV  + LGVQ
Sbjct: 60  GSFTGLPLELQEELLALTDALLAEGFIGSVRLSTRPDYIDEERLQLLQCHGVRLVELGVQ 119

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L    R H A++   A+ L +    ++   L+  +P+Q+    +  +++A++  
Sbjct: 120 SLDDRVLAAAERGHTAAQVAPAVALLKRFGFQVGLQLMVGMPEQSFDSVQETVRKAIAMQ 179

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D   +Y L + KGT     +  G  V  ++  AV          +  G++   I
Sbjct: 180 PDVARIYPLLVIKGTPLAADYAAGRFVPLTQEEAVTQAAWVYRELTEAGVNVIRI 234


>gi|213024211|ref|ZP_03338658.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 107

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 4/111 (3%)

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P QT+ +   +L++A++    HLS YQLTIE  TLF          LP ++   D++   
Sbjct: 1   PDQTLEEALNDLRQAIALNPPHLSWYQLTIEPNTLFGSRPPV----LPDDDALWDIFEQG 56

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGS 290
             + +A G   YE S ++  G +  HNLNYWR+GDY+GIG GAH +V    
Sbjct: 57  HQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYLGIGCGAHGKVTFPD 107


>gi|311114772|ref|YP_003985993.1| hypothetical protein HMPREF0421_20888 [Gardnerella vaginalis ATCC
           14019]
 gi|310946266|gb|ADP38970.1| conserved hypothetical protein [Gardnerella vaginalis ATCC 14019]
          Length = 215

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 27/206 (13%)

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD 274
             +    G +  P ++     Y +   + ++ GL  YEISN +  G ES HNL YW+  D
Sbjct: 1   MGRQIAAGTIHAPDDDDEAAKYEVADELFNSAGLEWYEISNWARTGFESQHNLGYWKNID 60

Query: 275 YIGIGPGAHSRVKVGS-------------------HRVAISIEKHPESWLKMVRKNGHAV 315
           + GIGPGAHS     S                   + +      HP+ W   +       
Sbjct: 61  WAGIGPGAHSHYNSVSGISKQSMDDCALLADSSKFYNLRSWDILHPKRWAHAINAGNVPW 120

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFS- 374
              E ++SE    E +M+GLR+REG+S+ +      R  + E + +  ++  IE  +   
Sbjct: 121 QNYECINSEDALIEEVMLGLRIREGLSIDELCTKM-RKANCEFDDSYLQKVLIEVCKEDL 179

Query: 375 ------RLRCTQRGMTMLDSVIANLA 394
                 R+  T++G  + D +I  + 
Sbjct: 180 AVLNKNRIAATRKGRLLNDLLIEKIV 205


>gi|227824521|ref|ZP_03989353.1| radical SAM family protein [Acidaminococcus sp. D21]
 gi|226905020|gb|EEH90938.1| radical SAM family protein [Acidaminococcus sp. D21]
          Length = 332

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 79/219 (36%), Gaps = 4/219 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C+          G E+      ++++ +         + + F GG+ + +   
Sbjct: 12  CPHRCLFCNQPIINGTAYHGVED----VKSQLRTLAGWVRKDHRNELAFYGGSFTALPLA 67

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+ +          ++ +   P ++   +    R  GV  + LGVQSL++ +L  
Sbjct: 68  EQEALLELVMPYRKAGYFTDLRLSTRPDAISPASLSLLRDYGVRTVELGVQSLDDVTLTL 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L R H+A     A    +     +   L+  LP +T    +  L+   +   +   +Y L
Sbjct: 128 LDRGHDAHCVYEATAQLQAAGFAVIHQLMVNLPGETEETLKKTLRGVTAMHPEGCRIYPL 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            + +GT     ++ G          V          +A 
Sbjct: 188 LVIEGTKLADWYRKGCYTPLDLAETVRRCAYLYEGLTAA 226


>gi|254302542|ref|ZP_04969900.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322734|gb|EDK87984.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 348

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 84/236 (35%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ +      +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMNLQKEYLEVVKHYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ LR  GRN+       +  L +N    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLRATGRNYTYDIVKKSCDLIKNYGFELGIQLMIGLPKSDFKSDLQSAIKSLDL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKKNLYQSLSIEEAVDRTVPIYSLLELKNINVIRV 237


>gi|300854470|ref|YP_003779454.1| hypothetical protein CLJU_c12840 [Clostridium ljungdahlii DSM
           13528]
 gi|300434585|gb|ADK14352.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 355

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 96/235 (40%), Gaps = 2/235 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +CD  +     +     F ++ +   Q+++ +    S+  + F G
Sbjct: 6   IPIFVPNEGCPHNCVFCDQTAITGNEEKVDACFTRNTIN--QYLKTIKRENSVVEVSFFG 63

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I  +    +L    +         I +   P  ++ +     +   V+ I LGVQ
Sbjct: 64  GTFTAIPMERQNELLSVAKEYKDRGDIDLIHMSTRPDYIDKSILDNLKSYSVDVIELGVQ 123

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL E+ L   GR H+A + + A  L +     +   ++  LP  T  +    ++R++   
Sbjct: 124 SLNEEVLIKSGRGHSAEDVVKASSLIKEYGFTLGHQIMLGLPSDTFEKDMETVKRSVLMN 183

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D   LY   + KGT    M+K G     + + AVD+      I   + ++   +
Sbjct: 184 PDIYRLYPALVIKGTFMETMYKKGVYKPYTLDEAVDICRNLYYILRKNKINVIRM 238


>gi|260496870|ref|ZP_05815990.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
           3_1_33]
 gi|260196612|gb|EEW94139.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
           3_1_33]
          Length = 348

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 86/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+  +    +  L ++    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYNIVKKSCDLIKSYGFELGIQLMIGLPKSDFKSDLQSAIKSLEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELELMYKKNLYQSLSIEEAVDRTVPIYSLLELKNINVIRV 237


>gi|256027059|ref|ZP_05440893.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289765043|ref|ZP_06524421.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716598|gb|EFD80610.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 348

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+       +  L +N    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYDVVKKSCDLIKNYGFELGIQLMIGLPKSDYKSDLQSAIKSLEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELELMYKKNLYQSLSIEEAVDRTVPIYSLLELKNINVIRV 237


>gi|15643860|ref|NP_228909.1| hypothetical protein TM1103 [Thermotoga maritima MSB8]
 gi|4981648|gb|AAD36179.1|AE001769_9 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 317

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 9/238 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++ +  C K+C +CD      + KV     +      ++   + +    +    F G
Sbjct: 4   IPVFLPYAGCKKRCVFCDQIKATGQAKVPS---LDDIARIIEEYSRTSNEYELG---FYG 57

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  + +   L  + +   V S   + +   P  +     +  +K GVN I +GVQ
Sbjct: 58  GTFTGLSEEKMEEYLRFVKRFPVVKS---VRVSTRPDEINERKLKILKKYGVNVIEIGVQ 114

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  ++ L    R + + EA  A  L +     +S  L+  LP        +   R +   
Sbjct: 115 SFLDEVLERSKRGYTSEEAEGACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECG 174

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            D + ++   + +GT  ++M ++G+    +   AVD+ +    I    G     I  H
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDVCSDLVCIFEGWGTKVIRIGYH 232


>gi|225019244|ref|ZP_03708436.1| hypothetical protein CLOSTMETH_03197 [Clostridium methylpentosum
           DSM 5476]
 gi|224947875|gb|EEG29084.1| hypothetical protein CLOSTMETH_03197 [Clostridium methylpentosum
           DSM 5476]
          Length = 339

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 95/240 (39%), Gaps = 2/240 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V+V    C  +C +C+  +           F++   +  Q +RQL    S + + F 
Sbjct: 5   NVAVFVPHAGCPHQCSFCNQRAISGTQLQPDAAFVRRTCS--QAVRQLGERCSDAELAFF 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+ + IE   +  +L    +         I +   P ++     +  ++  V  I LGV
Sbjct: 63  GGSFTAIERSYMLELLGAAQEFVGEGGLSGIRVSTRPDAISPEILELLKEHCVTAIELGV 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+ + L    R H A +A  A  L R     +   ++  L   +        ++ ++ 
Sbjct: 123 QSLDNRVLALNKRGHTAQDAEQAARLIRLYGFSLGLQMMVGLYGDSKESLYHTARQIVAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + D + +Y   + +GT    +++ G       N AVDL      +    G+    +  H+
Sbjct: 183 SPDTVRIYPTVVLRGTALEALYQSGAYQPLELNDAVDLCAGLLELFEQAGIRVIRLGLHA 242


>gi|294784572|ref|ZP_06749861.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294487788|gb|EFG35147.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 348

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 86/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+  +    +  L ++    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYNIVKKSCDLIKSYGFELGVQLMIGLPKSDYKSDLQSAIKSLEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKKNLYQSLSIEEAVDRTVSIYSLLKLKNINVIRV 237


>gi|160934421|ref|ZP_02081808.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
 gi|156867094|gb|EDO60466.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
          Length = 329

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 2/213 (0%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           ++    C  +C +CD  S     +  +   + + L      + L G +  S I F GG+ 
Sbjct: 4   FIPHAGCPHQCSFCDQKSITGESRRVEPGEVAAVLE--DARQALRGKQKASEIAFFGGSF 61

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + + P     +L              I I   P +++    +  ++ GV  I LG QS++
Sbjct: 62  TAVPPAYQESLLKAAYPFVKRGDFSGIRISTRPDAIDPPVLERLKQYGVKSIELGAQSMD 121

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L    R H A + + A  + R     +   ++  L   +        ++ +    D 
Sbjct: 122 DRVLVLNQRGHTAQDVVNASRMIREYGFSLGLQMMTGLYGSSPESDWQTGKKLVLCKPDC 181

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + +Y   + KGT   + ++ G    P    ++ 
Sbjct: 182 VRIYPTVVLKGTKLGEYYEAGLYSPPDAEQSIP 214


>gi|237743503|ref|ZP_04573984.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229433282|gb|EEO43494.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 348

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKQVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GRN+       +  L +N    +   L+  LPK           ++L  
Sbjct: 122 QSLDDKVLKATGRNYTYDVVKKSCDLIKNYGFELGIQLMIGLPKSDYKSDLQSAIKSLEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       S   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELELMYKKNLYQSLSVEEAVDRTVPVYSLLELKNINVIRV 237


>gi|237795889|ref|YP_002863441.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
 gi|229263292|gb|ACQ54325.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 363

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 93/239 (38%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+ +     + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPHNCVFCNQHKITGEKDEMIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       +K   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+ + L   GR H+  E   A  L +     +   ++  LP  T  +    + ++
Sbjct: 123 LGVQSLDNEVLLKSGRGHSVHEVHRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVAKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M + G+    + + A+D+  +  S+    G+    I
Sbjct: 183 LEMRPDIARIYPALVIKDTPMEYMLRKGNYKPYTLDEAIDITKILYSMYDKEGVKVIRI 241


>gi|291544313|emb|CBL17422.1| Histone acetyltransferase [Ruminococcus sp. 18P13]
          Length = 344

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 79/231 (34%), Gaps = 4/231 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +L +++    C  +C +CD +             + +   +        G  + + I
Sbjct: 2   KHKNLAIFIPHLGCPHRCSFCDQHCISGSVHAPSPEEVTALCRD---TLPSMGDPAHTQI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GG+ + +    +  +L+ +           I +   P  ++          GV  + 
Sbjct: 59  AFFGGSFTALPRDYMLGLLEAVQPFLRDGLAGGIRLSTRPDYMDRETAALLASYGVTAVE 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG QSL +  L    R H A +   A    R     +   ++  L   T        +  
Sbjct: 119 LGAQSLWDPVLEVNERGHTARDVYRAAACVRAQDMELGLQMMTGLYGSTPETDLATGRGC 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITS 244
           ++   D + +Y   +  GT   +++ DG   +LP  ++      L +   +
Sbjct: 179 IAMKPDTMRIYPTVVLPGTRLARLYADGAYPMLPLSDMIDLCARLLEECAA 229


>gi|317131321|ref|YP_004090635.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
 gi|315469300|gb|ADU25904.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
          Length = 334

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 87/249 (34%), Gaps = 4/249 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-S 73
            + ++  +V    C   C +CD  S   +        +      +  +R+  G RS    
Sbjct: 3   KAANVAFFVPHLGCAHACSFCDQRSIAGQAAPPSPADVAG---TLARVREQMGSRSRDAE 59

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + F GG+ + I  + +  +L+ +A          I +   P +V+ +     R  GV  I
Sbjct: 60  VAFFGGSFTAIPRRQMLALLEAVAPFLGADGFSGIRVSTRPDAVDDDVLALLRAHGVTSI 119

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG QS+++  L   GR H A +   A          +   ++  LP           + 
Sbjct: 120 ELGAQSMDDAVLCRNGRGHTARQVRDAALRVGRAGFSLGLQMMTGLPGDGPAGARRTARE 179

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +   D + +Y   + +GT       DG       + AV L        +  G+    +
Sbjct: 180 LAALHPDTVRIYPALVLRGTRMAAWWADGTYEPQPLDDAVLLCAALFDYFTRRGIRVLRM 239

Query: 254 SNHSFLGAE 262
             H+    E
Sbjct: 240 GLHAEPSLE 248


>gi|299144132|ref|ZP_07037212.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518617|gb|EFI42356.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 356

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 97/267 (36%), Gaps = 12/267 (4%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
              N + ++V    C   C +C+ N           + ++S    ++        ++   
Sbjct: 2   SKKNIIPIFVPHLGCPNDCVFCNQNKITASSTNITSDDVRSI---IEEYLSYFKDKNNIE 58

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + F GG+ + IE      +L    +    +   EI +   P  +++   +  +   V+ I
Sbjct: 59  VAFYGGSFTAIEICIQLELLSVAKEYKENNIIKEIRLSTRPDCIDIKRLEILKHYLVDTI 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQSL+E  L    R H+      A+ L +     +    +  LP  ++       + 
Sbjct: 119 ELGVQSLDEDVLNLSNRGHDDKCVYNAVKLIKKYGFNLGLQQMIGLPGDSLEASLYTTRE 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D + +Y   + K T   K   +G     S   AV    +T+ +   + L+   +
Sbjct: 179 FIKLNPDFVRIYPTLVIKDTELEKSLYNGSYKPLSIEDAV---RITKELLKLYILNGIYV 235

Query: 254 SNHSFLGAESLHNLNYWRYGDYIGIGP 280
                +G +   N+      D I  GP
Sbjct: 236 ---IRIGLQPTENI--QMGKDVIA-GP 256


>gi|218658829|ref|ZP_03514759.1| coproporphyrinogen III oxidase [Rhizobium etli IE4771]
          Length = 244

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 85/240 (35%), Gaps = 18/240 (7%)

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LARNIFPR 170
           +NP +      +    +GVNR S+GVQS +    + + R  + ++ +AA+  L  +    
Sbjct: 7   SNPRTFTPEMGEALEISGVNRASVGVQSFDPIVQKAINRVQSQAQVMAAVQNLRVHGVDS 66

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           ++FDL++ LP QT+         A++   D L+++                 +  LP   
Sbjct: 67  INFDLMFGLPHQTVQSCAESAMAAVAMRPDRLAVFGYAHVPF-YRKNQRLIEEAALPDMA 125

Query: 231 VAVDLYNLTQSITSAHGLHAYEISNHSFL----------GAESLHNLNYW--RYGDYIGI 278
              +  +       A G     + + +            G    ++L Y        IG 
Sbjct: 126 SRAEQASAMADTLVAAGYLQIGLDHFALPNDKLAMAQRSGHLRRNSLGYSADTCETVIGF 185

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           G  A  R+  G  +  ++      S+ + +     A      L+ E      ++  L   
Sbjct: 186 GASAIGRLGKGYVQNELA----QSSYSQYIAAGRLATSRGYRLTDEDAVRAAIIEQLMCN 241


>gi|150016055|ref|YP_001308309.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902520|gb|ABR33353.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 343

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 94/236 (39%), Gaps = 3/236 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG 77
           + ++V    C   C +C+ +         +E    S +T +  ++  +    +   I F 
Sbjct: 8   IPIFVPHEGCPHNCVFCNQDRITGVDD--EEVTASSVITTINDYLETIKNKNATIEISFF 65

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I  +    +L    +        +I +   P  +        ++ GV+ I LGV
Sbjct: 66  GGTFTGIREEKQRELLKVAKEFKEKGLIDKIRLSTRPDYINDYILTYLKEYGVDIIELGV 125

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL E+ L+  GR H+  + I A  L +     +   ++  LP  T  +     + ++  
Sbjct: 126 QSLNEEVLKKAGRGHSVHDVIDASKLIKEYKFILGHQIMPGLPGDTFERDIETTKESIKM 185

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + K T   +M+ + + +  S   AV++  +   +   H ++   I
Sbjct: 186 NPDICRIYPSLVIKDTPMERMYINNEYIPYSLEEAVNVSKVMYDMYKKHNINVIRI 241


>gi|156937134|ref|YP_001434930.1| radical SAM domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566118|gb|ABU81523.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 384

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 34/306 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           K LS+    M  +G   + +Y+H PFC   C +C F        +    + +  + +++ 
Sbjct: 25  KLLSSPGTPMRPEGR--VSLYLHVPFCRSLCKFCHFVRFPYSEDLA-SKYFKKLIKDVEE 81

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
               +       ++ GGG+PS  +P+ +  ++D +   W      +I++E +P  V+V  
Sbjct: 82  --AHSSGVEAVEVYVGGGSPSS-KPEALGELVDLVWSLWR----PQISVEVHP--VDVAF 132

Query: 122 F---QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIY 177
               +      V R+S+GVQS   + L+ LGR  +      AI + +   F   + D+++
Sbjct: 133 LGAAEHLDPKKVTRVSMGVQSFSPEGLKKLGRPVSPETNELAIEILKSKKFKTFNVDVVW 192

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            L   T      +  +AL    D ++ Y L                     E +    Y 
Sbjct: 193 GLEDPTP-----DAVKALECGADQVTFYPLMPFP-----------KRGPEGERLCFQNYQ 236

Query: 238 LTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISI 297
                 S  G      +  +F   E++ +    R  +++G+G  + S V   +H     +
Sbjct: 237 RIVREASKRGFVR--QNAWTFSKTEAMVDEYVARAEEFLGLGVSSFSLVGGAAHLNVFDL 294

Query: 298 EKHPES 303
           E++ + 
Sbjct: 295 EEYFKR 300


>gi|320536614|ref|ZP_08036634.1| hypothetical protein HMPREF9554_01365 [Treponema phagedenis F0421]
 gi|320146542|gb|EFW38138.1| hypothetical protein HMPREF9554_01365 [Treponema phagedenis F0421]
          Length = 359

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 68/346 (19%), Positives = 139/346 (40%), Gaps = 30/346 (8%)

Query: 44  YKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV 102
            +   E++I+S L E+ ++ +Q T  + ++S++FGGGTP  +    I  I+  + K + +
Sbjct: 3   NEEKCESYIESLLQEIHYVGKQSTEKKEVTSLYFGGGTP-ALAANRIKDIIKALEKYFII 61

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +    + IE +P +V ++  Q  + +G+ +IS+G+QS + +    LGR     EAI A+ 
Sbjct: 62  TDG--MGIELHPENVTISTLQTLKDSGITKISIGIQSFQTKYQSMLGR-----EAINAVA 114

Query: 163 LARNI----FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +A+ +    F  +S D I+ALP QT    + ++  A +   +H+++Y       T   K+
Sbjct: 115 MAQALAAVPFETVSMDFIFALPLQTYDDLKNDIDTAFANGANHVAIYPFIDFSFTE-TKV 173

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGI 278
                         + +Y L + +              +          +     +++G 
Sbjct: 174 PAMRKNEKQKLLDEITVYCLGKELLRTSIWT------FASEKHAC---YSSMTRDNFLGF 224

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
           G  A + +K        S+    E + K +             S  Q+   +L       
Sbjct: 225 GCSATTLLKDQFKINTFSV----EEYCKKINAGEIPTSLTLKFSLRQRMIYYLFWTA-YS 279

Query: 339 EGISVKDWEMLAGRNLDIECERNLQRQGFIE--RVQFSRLRCTQRG 382
             +S  D++   G +L             +   + +      T +G
Sbjct: 280 TKVSSNDFKKFFGVSLKKMYGLEFGIAKLLGFFKEENGIYSMTLKG 325


>gi|262068133|ref|ZP_06027745.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378221|gb|EFE85739.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 87/236 (36%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        +      +    +     SI  + F 
Sbjct: 5   NIPVFISHFGCPNACVFCNQKKINGRETDVS---LDDLKNIIDSYLKTLPKNSIKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I  +     L+ + K    +    + I   P  ++       +K GV  I LG+
Sbjct: 62  GGTFTGISMELQKQYLEVVKKYIDNADVEGVRISTRPECIDDEILTQLKKYGVKTIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+++ L+  GR+++      +  L +     +   L+  LPK       +   ++L  
Sbjct: 122 QSLDDEVLKATGRHYSYDVVKKSSDLIKKYGFTLGVQLMIGLPKADFKSDLISAVKSLDL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT    M+K       +   AVD      S+     ++   +
Sbjct: 182 NPDIARIYPTLVIKGTELEFMYKRNLYNSLTLEEAVDRAVPIYSLLELKDINVIRV 237


>gi|187778953|ref|ZP_02995426.1| hypothetical protein CLOSPO_02548 [Clostridium sporogenes ATCC
           15579]
 gi|187772578|gb|EDU36380.1| hypothetical protein CLOSPO_02548 [Clostridium sporogenes ATCC
           15579]
          Length = 363

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 10/239 (4%)

Query: 22  YVHWP------FCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+  P       C   C +C+ +     + ++  EN+++  +    +++ +    S   +
Sbjct: 6   YI-IPIFVAQEGCPYNCVFCNQHKITGEKDEIIDENYVRETIE--AYIKTIDRENSTLEV 62

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GGT + I  +    +L    +         I +   P  ++       +K   + I 
Sbjct: 63  SFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDCIHMSTRPDYIDREILDNLKKYSADIIE 122

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL+E+ L   GR H+  E   A  L +     +   ++  LP  T  +    ++++
Sbjct: 123 LGVQSLDEEVLLKSGRGHSVEEVYRASKLIKEYGFTLGHQIMLGLPGDTFKKDIETVEKS 182

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L    D   +Y   + K T    M + G     + + A+D+  +  S+    G+    I
Sbjct: 183 LKMKPDIARIYPALVIKDTPMEYMLRKGTYKPYTLDEAIDITKILYSMYDKEGIKVIRI 241


>gi|225548983|ref|ZP_03769960.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 94a]
 gi|225370586|gb|EEH00023.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 94a]
          Length = 377

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLHAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|237737606|ref|ZP_04568087.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419486|gb|EEO34533.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 341

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+      R        ++     ++   +     S   + F 
Sbjct: 5   NIPVFISHFGCPNSCVFCNQKKINGRETDVT---MEDLKNIIEMYLETLPKNSKKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I  +     L    +         I +   P  +        +K GV  + LGV
Sbjct: 62  GGTFTGISMKLQEEYLKTAYEYIKRGDISGIRLSTRPDCINDEIVAQLKKYGVTSVELGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+E+ L    R +  S    A    +     +   L+  LPK T         +AL  
Sbjct: 122 QSLDEEVLLATERYYPVSVVAEACKTIKKYGIELGIQLMIGLPKSTDESDYETAVKALDM 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D + +Y   + K T    M   G+    +   A+       ++  ++G++   +
Sbjct: 182 EPDMVRIYPTLVIKNTKMENMFLKGEYTPLTIEEAIARTRKIYALLESNGINIIRV 237


>gi|221217853|ref|ZP_03589320.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 72a]
 gi|224533316|ref|ZP_03673910.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi CA-11.2a]
 gi|225549916|ref|ZP_03770877.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 118a]
 gi|221192159|gb|EEE18379.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 72a]
 gi|224513481|gb|EEF83838.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi CA-11.2a]
 gi|225369375|gb|EEG98827.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 118a]
          Length = 377

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I+  R     ++ D+   +P Q  +  + +L+  +SY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELVSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLHAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|253699691|ref|YP_003020880.1| radical SAM protein [Geobacter sp. M21]
 gi|251774541|gb|ACT17122.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 343

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 12/225 (5%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  +C +CD                   +  +    +    R + +  F G
Sbjct: 5   VPFFIPHLGCPHRCVFCDQEKVAGASGGLPAP--AELVARVAKYAEKARGRDLEAA-FYG 61

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +   +   +L+ +       +   + +   P SVE +     +  GV  + LGVQ
Sbjct: 62  GTFTALPRADQERLLNPLQPLLAQGALKRLRVSTRPDSVEADTANFLKSFGVATVELGVQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++ + LR  GR H+A++  +A+   +     +   L+  LP  +  +    L R L+ +
Sbjct: 122 SMDAEVLRLSGRGHDAADVESAVAALKKAGIEVGIQLMPGLPGDSPPRSLDSLSRVLALS 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              L +Y   +  GT   +M+  G     S   AV   NL + + 
Sbjct: 182 PSFLRIYPTLVISGTELSRMYTAGSYHPLSLKDAV---NLCKEML 223


>gi|257466298|ref|ZP_05630609.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917455|ref|ZP_07913695.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691330|gb|EFS28165.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 348

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 93/229 (40%), Gaps = 3/229 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +++    C   C +C+      +    Q   ++     ++   +    +S   + F 
Sbjct: 5   NIPIFISHFGCPNHCVFCNQKKINGQETDIQ---VEDIHRIVKEYLKTLPKKSEKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + +  +     L+ + +         I +   P  ++ +  +  RK GV  I LG+
Sbjct: 62  GGTFTGLSMELQREYLEALQEYIERGDIQGIRLSTRPDYIQKDILEQLRKYGVKAIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+E+ LR   R +   + +++I   ++    +   ++  LP  ++ +    ++  ++Y
Sbjct: 122 QSLDEEVLRRSDRFYTEKQVLSSIQQMQSYGFEVGIQIMVGLPGSSLEKEIKTIKTLIAY 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             D   +Y   + + T+  K +  G+    +   AV+   +  +     
Sbjct: 182 QPDTARIYPTLVLEDTILEKQYHQGEYQALTLEEAVERSRILYAYLEQA 230


>gi|223889360|ref|ZP_03623946.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 64b]
 gi|223885046|gb|EEF56150.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 64b]
          Length = 377

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLFRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + + +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|148265179|ref|YP_001231885.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146398679|gb|ABQ27312.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 351

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 9/201 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  KC +CD         VG+       L ++   R     RS+  + F G
Sbjct: 6   VPFFISHRGCPHKCVFCDQVKIAGA--VGEFPTGTEILAKIASYRDSGRCRSVG-VAFYG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + + P     +L  +           I +   P ++++   Q  R+ GV  + LGVQ
Sbjct: 63  GTFTALSPAVQEGLLKPLQPLVASGEVGSIRVSTRPDAIDLQTVQFLREMGVKTVELGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+ +  L   GR H +++   A  + R     +   L+  LP  T  +    L R ++  
Sbjct: 123 SMADDVLDLAGRGHTSADVARASRMLREAGLALGAQLMPGLPGDTSEKAMDSLARVIALQ 182

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D L +Y   +  GT     +
Sbjct: 183 PDFLRIYPTLVIAGTKLADFY 203


>gi|218249876|ref|YP_002375156.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi ZS7]
 gi|226321354|ref|ZP_03796881.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi Bol26]
 gi|218165064|gb|ACK75125.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi ZS7]
 gi|226233150|gb|EEH31902.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi Bol26]
          Length = 377

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   + +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIVKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|304440215|ref|ZP_07400105.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371264|gb|EFM24880.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 340

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 10/253 (3%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + +++    C   C +C+ N         +    ++    +          SI  + F
Sbjct: 4   NIIPIFIPHLGCPHDCVFCNQNKIASTSIATK----KTVKNTIDEYLDYFRKDSIVEVAF 59

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I  ++    L    +    +    I +   P  ++ N  +  +  GV+ + LG
Sbjct: 60  YGGSFTAIPIEDQINFLSVANEYKKKNLVSFIRLSTRPDYIDENILEILKSNGVDTVELG 119

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS  +  L   GR H+      ++ + +     +    +  LP              ++
Sbjct: 120 VQSSNQNVLNKSGRGHDFDCVKKSVKMLKKYGFNVGLQQMVGLPYSNDELEMQTAMDFMN 179

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D + +Y   + K T     +   +    + N AV   N+   + S +  +   +   
Sbjct: 180 LKPDFVRIYPTLVVKDTELENKYNKSEYKSLNLNEAV---NICAELLSLYNKNNIPV--- 233

Query: 257 SFLGAESLHNLNY 269
             +G +    +NY
Sbjct: 234 IRIGLQPTDEINY 246


>gi|78223519|ref|YP_385266.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78194774|gb|ABB32541.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 346

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 85/235 (36%), Gaps = 9/235 (3%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  +C +CD      +     E   +  +  +         R +  + F G
Sbjct: 6   VPFFISHQGCPHQCVFCDQERISGQRPGLPEP--EEMIATIDRHAASGRGRPLE-VAFYG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +   +   +L  +       S   + +   P +V+    +     GV  + LGVQ
Sbjct: 63  GTFTSLPRSDQERLLAPLQPLMATGSVARVRLSTRPDAVDGETARFLASRGVATVELGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+++  L   GR H A+    A          +   L+  LP  T       L+R L+ +
Sbjct: 123 SMDDAVLTAAGRGHGAAHVEQAFASLCGAGIDVGAQLMPGLPGDTADSTLESLERVLALS 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + +Y   + +GT   ++ + GD    + + AV L         + G+    I
Sbjct: 183 PAFMRIYPTLVVEGTRLAELWRSGDYTPLALDDAVSLCAAMLRRCISAGVPVIRI 237


>gi|254472774|ref|ZP_05086173.1| radical SAM domain protein [Pseudovibrio sp. JE062]
 gi|211958238|gb|EEA93439.1| radical SAM domain protein [Pseudovibrio sp. JE062]
          Length = 257

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 5/192 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSISSIFFG 77
           +Y+H P+C +KC +C F+            +I   + ++  + Q+T   G + I S+  G
Sbjct: 57  LYLHIPYCAQKCSFCAFSGGNTLDFADAREYIALLIKQLDKILQITPAYGQKRIRSVHIG 116

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+P L+    I  +L  +     +  N EI IE  PS+ + +         V ++S GV
Sbjct: 117 GGSPDLVRG-QIGKLLSHVRGLDGIDDNTEIAIECAPSTTKPDFLDELIAHKVTKLSFGV 175

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+  Q    +    +  +            P ++ D I  LP QT+   E +L  AL +
Sbjct: 176 QSINPQIRANVRLPRSMRKVEELCEYVAGQTPIVNADFITGLPGQTLADVEADLSYALKH 235

Query: 198 A-VDHLSLYQLT 208
             ++ +S Y LT
Sbjct: 236 PVINAVSTYLLT 247


>gi|195941476|ref|ZP_03086858.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi 80a]
          Length = 377

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I+  R     ++ D+   +P Q  +  + +L+  +SY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELVSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|237838013|ref|XP_002368304.1| radical SAM domain containing protein [Toxoplasma gondii ME49]
 gi|211965968|gb|EEB01164.1| radical SAM domain containing protein [Toxoplasma gondii ME49]
          Length = 845

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 114/352 (32%), Gaps = 88/352 (25%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN-----------------------------SHVRRYKVGQ 48
              VY+H PFCVK+C +C F                              S   ++  G+
Sbjct: 112 PRAVYIHMPFCVKRCHFCAFPVTLLPATPRRPPHSLHCAPESQCRTGVSCSFSMKHNFGR 171

Query: 49  ENFIQSFLTEMQWMRQLTGPRS------ISSIFFGGGTPSLIEPQNIALILD-------- 94
           E               L G           SI+FGGGTPSLI P+ +  +L         
Sbjct: 172 EAPASGHSKTSSRRGHLWGASGEFSETLFRSIYFGGGTPSLIPPRLLRRVLTVLEAEAHS 231

Query: 95  -GIAKNWTVSSNVEITIEANPSSV--------EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              A    +  +    +++ P                +     GV R S+GVQS ++  L
Sbjct: 232 LERASTRRIPPSAASCLQSYPVCTLMFTDTVHSKEYLEELADLGVTRFSVGVQSFDDDIL 291

Query: 146 RFLGRNHNASEAIAAIHLARNI-------FPRMSFDLIYALPKQTMTQWEMELQ-RALSY 197
           + LGR+++ +  +  +   R++         R+       L  Q   Q   +L+   +  
Sbjct: 292 KRLGRSNDRAGNVRVLQCLRDLVREYERRGKRLLVSTDILLSFQRRDQLLEDLRIWLVDR 351

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H  +        + F ++ K  D      +      +                    
Sbjct: 352 GFEHYEI--------SSFARIEKHNDDSCFVGDT----CDNASKRPKMD----------- 388

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                 LH+  YWR   + G G GA S V +       +     E+++K VR
Sbjct: 389 -PDYRCLHHEAYWRSEPFFGFGMGAASFVNLHR----WTRPDRLEAYVKWVR 435


>gi|216264897|ref|ZP_03436889.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 156a]
 gi|215981370|gb|EEC22177.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 156a]
          Length = 377

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   + +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIVKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVT- 283

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 284 LELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|254519217|ref|ZP_05131273.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
 gi|226912966|gb|EEH98167.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
          Length = 344

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 89/240 (37%), Gaps = 11/240 (4%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRR-----YKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           + +++    C  +C +C+ +   +       +      +  +L  +          S   
Sbjct: 8   IPIFISHQGCPHQCVFCNQDRIAKVVQEEVTERDVRETVDEYLKTIDH------KNSTVE 61

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I F GGT + I       +L    +        +I +   P ++        +   V+ I
Sbjct: 62  ISFFGGTFTAINVNKQKELLAVAKEYKEKGYIDKIRMSTRPDAINKYILDYLKDYKVDII 121

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQSL+++ LR  GR H+A E   A  L +     +   ++  LP  T  +    +++
Sbjct: 122 ELGVQSLDDEVLRLSGRGHSAEEVEKASKLIKEYGITLGHQIMPGLPGDTFEKDIETVKK 181

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++    D   +Y   + K T    M++ G     S   AVD+      +     ++   I
Sbjct: 182 SIKMKPDICRIYPSLVIKDTPMADMYERGQYKPYSLEEAVDISKELYKLYKDANVNIIRI 241


>gi|312149478|gb|ADQ29549.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi N40]
          Length = 377

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + E +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLHAVSLLFCNDKNN--NVRALIIKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|153954022|ref|YP_001394787.1| hypothetical protein CKL_1397 [Clostridium kluyveri DSM 555]
 gi|219854636|ref|YP_002471758.1| hypothetical protein CKR_1293 [Clostridium kluyveri NBRC 12016]
 gi|146346903|gb|EDK33439.1| Hypothetical protein CKL_1397 [Clostridium kluyveri DSM 555]
 gi|219568360|dbj|BAH06344.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 357

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 93/250 (37%), Gaps = 8/250 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +CD        +    NF++  +    +++ +    S   + F G
Sbjct: 8   IPIFVPHEGCPHSCIFCDQRIITGNEQKVDVNFVRRTIE--DYLKTIKRSTSKVEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + I       +L    +         I +   P  ++       R+  V+ I LG+Q
Sbjct: 66  GTFTAIPIDKQRELLGAAKEYKDEGYIDYIRLSTRPDYIDNYILDNLREYSVDIIELGIQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+   L    R H++ +   A +L +     +   ++  LP  T  +    ++ ++   
Sbjct: 126 SLDSDVLLKSERGHSSEDVKYASYLVKKYGFVLGHQIMVGLPCDTFEKDMETVRNSIGMK 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D   +Y   + KGT    M+K         + AVD+      I  A+ +    I     
Sbjct: 186 PDIYRIYPALVIKGTAMENMYKKKQYRPYRLSEAVDICKTLYCILRANKIKVIRI----- 240

Query: 259 LGAESLHNLN 268
            G +   N+N
Sbjct: 241 -GLQPTENIN 249


>gi|221505598|gb|EEE31243.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 845

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 114/352 (32%), Gaps = 88/352 (25%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN-----------------------------SHVRRYKVGQ 48
              VY+H PFCVK+C +C F                              S   ++  G+
Sbjct: 112 PRAVYIHMPFCVKRCHFCAFPVTLLPATPRRPPHSLHCAPESQCRTGVSCSFSMKHNFGR 171

Query: 49  ENFIQSFLTEMQWMRQLTGPRS------ISSIFFGGGTPSLIEPQNIALILD-------- 94
           E               L G           SI+FGGGTPSLI P+ +  +L         
Sbjct: 172 EAPASGHSKTSSRRGHLWGASGEFSETLFRSIYFGGGTPSLIPPRLLRRVLTVLEAEAHS 231

Query: 95  -GIAKNWTVSSNVEITIEANPSSV--------EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              A    +  +    +++ P                +     GV R S+GVQS ++  L
Sbjct: 232 LERASTRRIPPSAASCLQSYPVCALMFTDTVHSKEYLEELADLGVTRFSVGVQSFDDDIL 291

Query: 146 RFLGRNHNASEAIAAIHLARNI-------FPRMSFDLIYALPKQTMTQWEMELQ-RALSY 197
           + LGR+++ +  +  +   R++         R+       L  Q   Q   +L+   +  
Sbjct: 292 KRLGRSNDRAGNVRVLQCLRDLVREYERRGKRLLVSTDILLSFQRRDQLLEDLRIWLVDR 351

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H  +        + F ++ K  D      +      +                    
Sbjct: 352 GFEHYEI--------SSFARIEKHNDDSCFVGDT----CDNASKRPKMD----------- 388

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                 LH+  YWR   + G G GA S V +       +     E+++K VR
Sbjct: 389 -PDYRCLHHEAYWRSEPFFGFGMGAASFVNLHR----WTRPDRLEAYVKWVR 435


>gi|221484431|gb|EEE22727.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 845

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 114/352 (32%), Gaps = 88/352 (25%)

Query: 18  SLGVYVHWPFCVKKCPYCDFN-----------------------------SHVRRYKVGQ 48
              VY+H PFCVK+C +C F                              S   ++  G+
Sbjct: 112 PRAVYIHMPFCVKRCHFCAFPVTLLPATPRRPPHSLHCAPESQCRTGVSCSFSMKHNFGR 171

Query: 49  ENFIQSFLTEMQWMRQLTGPRS------ISSIFFGGGTPSLIEPQNIALILD-------- 94
           E               L G           SI+FGGGTPSLI P+ +  +L         
Sbjct: 172 EAPASGHSKTSSRRGHLWGASGEFSETLFRSIYFGGGTPSLIPPRLLRRVLTVLEAEAHS 231

Query: 95  -GIAKNWTVSSNVEITIEANPSSV--------EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              A    +  +    +++ P                +     GV R S+GVQS ++  L
Sbjct: 232 LERASTRRIPPSAASCLQSYPVCALMFTDTVHSKEYLEELADLGVTRFSVGVQSFDDDIL 291

Query: 146 RFLGRNHNASEAIAAIHLARNI-------FPRMSFDLIYALPKQTMTQWEMELQ-RALSY 197
           + LGR+++ +  +  +   R++         R+       L  Q   Q   +L+   +  
Sbjct: 292 KRLGRSNDRAGNVRVLQCLRDLVREYERRGKRLLVSTDILLSFQRRDQLLEDLRIWLVDR 351

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H  +        + F ++ K  D      +      +                    
Sbjct: 352 GFEHYEI--------SSFARIEKHNDDSCFVGDT----CDNASKRPKMD----------- 388

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                 LH+  YWR   + G G GA S V +       +     E+++K VR
Sbjct: 389 -PDYRCLHHEAYWRSEPFFGFGMGAASFVNLHR----WTRPDRLEAYVKWVR 435


>gi|85860142|ref|YP_462344.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
 gi|85723233|gb|ABC78176.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
          Length = 363

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 119/364 (32%), Gaps = 33/364 (9%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFG 77
           + V++ W  C ++C +C+ +     +         +F   +    +     +S   I F 
Sbjct: 14  IPVFLPWQGCRQRCIFCNESITTGTFPAAFSE--AAFEKTVTLYSENQKRGKSPVQIAFY 71

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + ++ +    +L              + I   P  ++ +     R+ GV  + LG 
Sbjct: 72  GGTFTGMDRKEQTRLLQLAEPYIREGRVDSLRISTRPDEIDEDLLDFLRRHGVRTVELGA 131

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL E+ LR   R H   +  +A+   R     +   L+  LP  +   +   + R L  
Sbjct: 132 QSLVEEVLRHSRRGHTVGDVFSAVERLRRKGFEVGIHLMMGLPGDSPQFFAATIDRTLDL 191

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D + L+   + + T+   ++  G     S N AV L           G+    +   S
Sbjct: 192 QPDTVRLHPTLVFRNTVLATLYARGQYSPLSLNEAVGLSRYALLRLEKGGIPVIRLGLQS 251

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
               E   N+     G Y              S   A        + L   R  G AV  
Sbjct: 252 TPEMELPGNIVA---GPY---------HPAFRSLVNAAIFRDMATTLLSEARSEGRAVSF 299

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR 377
             FLS             R  +G ++        R L IE   +           ++R  
Sbjct: 300 --FLSPRDV------SDFRGHKGENLSLLAERF-RPLKIEVTND---------PDYTRGW 341

Query: 378 CTQR 381
            T R
Sbjct: 342 LTLR 345


>gi|187918512|ref|YP_001884075.1| coproporphyrinogen oxidase, anaerobic [Borrelia hermsii DAH]
 gi|119861360|gb|AAX17155.1| coproporphyrinogen oxidase, anaerobic [Borrelia hermsii DAH]
          Length = 379

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 125/335 (37%), Gaps = 24/335 (7%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
             L +Y+       +C      S+V         F    L E+    ++ G   I +++ 
Sbjct: 7   TDLSIYIDL----TRC-----FSYV---------FFNKILHELSCCLEVLGFPKIKTLYI 48

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              T       N+   L  ++KN+   +  E T E +P  +  +         V+RISL 
Sbjct: 49  KYETLGFGNDANLESFLTSLSKNFDFVTLDEFTFELHPGEITPSLLTILNDFSVSRISLD 108

Query: 137 VQSLEEQSLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           V+S   + LR LG +  +      A+         ++ DL   +P Q     + +L + +
Sbjct: 109 VKSFSSKFLRILGASWISVGRVNIAVDNIHKFDFDLNIDLSINIPYQEKMHLKSDLVKVI 168

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           + A +H+ L ++ +++     ++ K+              +        + G   YEISN
Sbjct: 169 ACAPEHICLSEVLVDEENCNIELFKEVSCNYDEAKAEYFWF-YALDFLESSGYINYEISN 227

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
            +  G ES HN  YW    Y+G+G  + S +         ++ +  +++L   R    A 
Sbjct: 228 FALKGHESKHNARYWALKPYLGLGINSVSLLVAHKGDGLEAVIRRDDNFLGSPR----AS 283

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
              E LS         +  L  + G+ V   +   
Sbjct: 284 ATFESLSDLDFFICHFITNLGTKNGLDVSILKRRF 318


>gi|294648242|ref|ZP_06725779.1| radical SAM domain protein [Bacteroides ovatus SD CC 2a]
 gi|292636430|gb|EFF54911.1| radical SAM domain protein [Bacteroides ovatus SD CC 2a]
          Length = 198

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 3/164 (1%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           L  Y   + GQ +    +Y H PFC  KC YC+  S           ++++   + Q + 
Sbjct: 30  LLPYLEQVEGQKA---SLYFHIPFCSHKCGYCNLFSLQTNRADYIATYLETLHKQAQQLS 86

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            LT      S   GGGTP L+    +  +L+  A      S+   +IE +P   +     
Sbjct: 87  PLTTGLIFDSFAIGGGTPLLLTVSQLEYLLETAALFGVHPSHAFTSIETSPEYADPARLT 146

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++AGV RIS+G+QS   + L  L R         A+   R +
Sbjct: 147 WLKQAGVARISIGIQSFLNEELTALKRRPRQDTINQALETIRKM 190


>gi|296109137|ref|YP_003616086.1| histone acetyltransferase, ELP3 family [Methanocaldococcus infernus
           ME]
 gi|295433951|gb|ADG13122.1| histone acetyltransferase, ELP3 family [Methanocaldococcus infernus
           ME]
          Length = 534

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 132/364 (36%), Gaps = 46/364 (12%)

Query: 28  CVK-KCPYCD------FN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  R            + ++Q+     Q  +      
Sbjct: 90  CPHGKCIFCPGGLDSVFGDVPQSYTGREPATMRGLMFNFDPYLQTRARIEQLEKVGHPTD 149

Query: 70  SISSIFFGGGTPS---------------LIEPQNIALILDGIAKNWTVSSNV-EITIEAN 113
            I  I  GG  P+                +  +    + +    N T       + IE  
Sbjct: 150 KIELIIMGGTFPAREIEYQDWFIKRCLDAMNERESKSLEEAQKINETAKHRCVALCIETR 209

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LGVQS+  + L+   R H+  + I A  L ++   ++S+
Sbjct: 210 PDYCSEKEINQMLKLGATRVELGVQSIYNEILKLCKRGHSVEDTIKATQLLKDSGLKVSY 269

Query: 174 DLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            L+  +P  ++   +    E+     +  D + +Y   + +GT  Y+M K G+     E 
Sbjct: 270 HLMPGMPGSSIEMDKKMFKEIFTNPDFMPDMVKIYPCLVIEGTELYEMWKRGEFKPYREE 329

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSR 285
            A+++ +  +SI            +I     +      NL    ++Y +  G+       
Sbjct: 330 EAIEVISYAKSIMPKWVRTSRIQRDIPATVIVDGVKKSNLGELVYKYMEKKGLRCRCIRC 389

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVK 344
            +VG       I   PE  +K+VR++  A    E FLS E   ++ L+  LRLR+    K
Sbjct: 390 REVGHVYYKKGILPDPEH-IKLVREDYEASGGTEIFLSFEDVKNDILIAFLRLRD--PYK 446

Query: 345 DWEM 348
            +  
Sbjct: 447 PFRK 450


>gi|188588502|ref|YP_001920586.1| radical SAM superfamily protein [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498783|gb|ACD51919.1| radical SAM superfamily protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 340

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 99/235 (42%), Gaps = 2/235 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +       +   + ++  +   ++++ +T   +I  + F G
Sbjct: 8   IPIFVPQEGCPHKCVFCNQDRITGLKDIVTTDIVRKTID--EYLKTITNKEAIIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + ++ +     L+            +I +   P +++       ++  V+ I LGVQ
Sbjct: 66  GTFTAVKEEKQRAFLEIAKGYKDKGLIDKIRLSTRPDAIDNYILTYLKEYKVDIIELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L+  GR H  S+   A  L +     +   ++  LP  T  +  +  + ++   
Sbjct: 126 SLDDEILKRSGRGHYVSDVEKASALIKQYGFVLGHQIMPGLPGDTFEKDILTTKLSIKMK 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D   +Y   + K T   KM+K G  +  S + AV++      +   + +    I
Sbjct: 186 PDICRIYPALVIKDTPMEKMYKMGTYIPYSLDEAVEISMAMYELYLENNIQVIRI 240


>gi|15595001|ref|NP_212790.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi B31]
 gi|2688591|gb|AAC67009.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi B31]
          Length = 377

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + + +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|224532364|ref|ZP_03672994.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi WI91-23]
 gi|224512671|gb|EEF83042.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi WI91-23]
          Length = 377

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 124/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G    + + +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|322420695|ref|YP_004199918.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320127082|gb|ADW14642.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 350

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 9/202 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  +C +CD         V      +  L  ++  RQ    R +  + F G
Sbjct: 6   VPFFIPHLGCPHRCVFCDQEKVAGARGVLPTP--EELLARIEEYRQGAPARELE-VAFYG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  +    +L  +       +   + +   P +V+  + +  ++ GV  + LGVQ
Sbjct: 63  GTFTALPRRQQQDLLLPLQPLLARGALKSVRLSTRPDAVDAVDSRFLKEHGVATVELGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+ + L   GR H ASE   A+   +     +   L+  LP  T  +    L RAL+  
Sbjct: 123 SLDPEVLLLSGRGHGASEVEEAVAALKAAGIEVGIQLMPGLPGDTPERALASLHRALALK 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
              L +Y   + + T     ++
Sbjct: 183 PSFLRIYPTLVIEETELAARYR 204


>gi|257468860|ref|ZP_05632954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063110|ref|ZP_07927595.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688786|gb|EFS25621.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 346

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 3/236 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +++    C   C +C+      R        ++     ++   +     S   + F 
Sbjct: 5   NIPIFISHFGCPNACVFCNQKKINGRETDVT---MEDLKETIETYLETLPKNSKKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + +         I +   P  +     +  +K GV  + LGV
Sbjct: 62  GGTFTGISFDLQRQYLETVHEYIKKGLVDGIRLSTRPDCINKEIVEQLKKYGVTSVELGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+E+ L+   R + A     A  L +     +   L+  LP+ T        ++AL  
Sbjct: 122 QSLDEKVLKATARYYPAEVVAEACSLLKEYNIELGIQLMIGLPESTFESDFFTAEKALKM 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             D   +Y   + KGT   +M KDG+    S   AV+      S+  + G++   +
Sbjct: 182 NPDTARIYPTLVIKGTKMEEMFKDGEYKALSIEEAVERTRKIYSLLESSGVNVIRV 237


>gi|312148280|gb|ADQ30939.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Borrelia burgdorferi JD1]
          Length = 377

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/333 (19%), Positives = 125/333 (37%), Gaps = 28/333 (8%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F+   +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + +G +  + + +   I+  R     ++ D+   +P Q  +  + +L+  LSY
Sbjct: 114 SFSLEFRKIVGISEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSY 173

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             +H+       E+                +   +  L+        ++G   YEI+N +
Sbjct: 174 MPEHICFSDFICEE-------EGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFA 226

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             G ES HN   W    ++G+G  A S +         ++          V+ N H V  
Sbjct: 227 LKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN--NVRALIRKTGSFVKANNHLVTF 284

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
            E L   +      + GL   +G+S++   +  
Sbjct: 285 -ELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 316


>gi|290968971|ref|ZP_06560506.1| radical SAM protein, TIGR01212 family [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780927|gb|EFD93520.1| radical SAM protein, TIGR01212 family [Megasphaera genomosp. type_1
           str. 28L]
          Length = 358

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 88/233 (37%), Gaps = 6/233 (2%)

Query: 15  GSNSLGVYV-HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            ++ + +++ H   C  +C +C+      +++V    F++  +   Q+M+  T  R    
Sbjct: 2   KTSIIPIFIPHI-GCPYRCVFCNQWKITGQHRVPTATFVKETIQ--QYMQAATLSRHWE- 57

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           + F GG+ + +       +L+   +         I     P +V  +  +   + GVN +
Sbjct: 58  VAFYGGSFTAVPTALQESLLEPATQALRQGKIHGIRCSTRPDAVGKDVIERLLRFGVNTV 117

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQS+++  L+   R H A++ + A          +   L+  LP +     +     
Sbjct: 118 ELGVQSMDDTVLQRAKRGHTAADVVQATRRLHKYGLLVGHQLMPGLPGEDERSLQQTAAA 177

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG-DLVLPSENVAVDLYNLTQSITSA 245
             +   D   +Y + +   T     ++ G    L +         L Q +   
Sbjct: 178 VCALQPDAARIYPVAVLAETELAAQYRQGLYRPLTTAEGIRRGAYLKQRLLEH 230


>gi|258406358|ref|YP_003199100.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798585|gb|ACV69522.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 354

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 12/229 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVH---WPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           + +    TG+        +H    PF  C  +C YC  +    +  +  E        ++
Sbjct: 15  ATFAPAPTGKAKRH----IHPVFLPFQGCPGRCIYCAQDRQTGQSPLALEEMHARLHDQL 70

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
               +      +    F GGT + +  Q +   L+   +         +     P  +E 
Sbjct: 71  SNYARQGTSLELG---FFGGTFTGLPLQWLQRFLELAREFKNRGVLERVRCSTRPDFLES 127

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                  +   + + +G+QS +   LR   R +    A+AA +  +     +   L+  L
Sbjct: 128 RKLDLLAEHDFDLVEIGIQSFDGTVLRQSQRGYTPETAVAACNRVKTFGMGLGIQLLPGL 187

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           P  T   W  +++  LS A + L +Y   +  GT   ++ ++GD     
Sbjct: 188 PGHTPAIWARDIEATLSVAPECLRIYPCVVIDGTPLSRLWREGDYQPWP 236


>gi|150390512|ref|YP_001320561.1| radical SAM domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950374|gb|ABR48902.1| Radical SAM domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 347

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 86/251 (34%), Gaps = 8/251 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C   C +C+  +            I++ +    +++  T  +    I F G
Sbjct: 8   IPIFIPHEGCPNDCSFCNQKTIAGTSSQVNVEKIETIIQS--YLKLYTNQQKQREIAFYG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + +  +     L              I +   P  +     Q  +  GV  I LGVQ
Sbjct: 66  GSFTGLPMEVQKQYLTVAFNYKKKGLIDGIRLSTRPDYINEEILQQLKFYGVTIIELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  E+ L+   R H+  +   A+   R    ++   ++  L   T  + E   +  +S  
Sbjct: 126 STNEEVLKMNKRGHSKDDVFKAVKSIRKYEFQLGLQMMIGLFGDTEQRIEQTAKDLISLR 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D + +Y   + + T   + + +G          VD+          + +          
Sbjct: 186 PDFVRIYPTLVIRDTALERYYYEGIFEPLGLEECVDICESLLVAFEGNHIKVI------R 239

Query: 259 LGAESLHNLNY 269
           LG +S   + Y
Sbjct: 240 LGLQSTEEIAY 250


>gi|251779232|ref|ZP_04822152.1| radical SAM superfamily protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243083547|gb|EES49437.1| radical SAM superfamily protein [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 340

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 99/235 (42%), Gaps = 2/235 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +       +   + ++  +   ++++ +T   +I  + F G
Sbjct: 8   IPIFVPQEGCPHKCVFCNQDRITGLKDIVTTDIVRKTID--EYLKTITNKEAIIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + ++ +     L+            +I +   P +++       ++  V+ I LGVQ
Sbjct: 66  GTFTAVKEEKQRAFLEIAKGYKNKGLIDKIRLSTRPDAIDNYILTYLKEYKVDIIELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L+  GR H  S+   A  L +     +   ++  LP  T  +  +  + ++   
Sbjct: 126 SLDDEILKRSGRGHYVSDVEKASALIKQYGFVLGHQIMPGLPGDTFEKDILTTKLSIKMK 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D   +Y   + K T   KM+K G  +  S + AV++      +   + +    I
Sbjct: 186 PDICRIYPALVIKDTPMEKMYKMGTYIPYSLDEAVEISKAMYKLYLENNIQVIRI 240


>gi|310779300|ref|YP_003967633.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748623|gb|ADO83285.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
          Length = 342

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 3/215 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V++    C   C +C+         +  +  +      ++   +     S   + F 
Sbjct: 5   NIPVFISHFGCPNSCVFCNQKKITG---IETDVTLDELEGIIEDYLKTLPKESRKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + +         I +   P  +        ++ GV  I LGV
Sbjct: 62  GGTFTGISIDLQRNYLEVVKRYIDRGLIDGIRMSTRPDYISREILLMLKEYGVTTIELGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+ + L   GR ++  +   A  + +     +   L+  LP  T  +  +  ++ +  
Sbjct: 122 QSLDPKVLELSGRGYSPEKVYEASLMIKESGINLGIQLMPGLPGSTDEKDFISAKKVVGI 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             D + +Y   +  GT   K++  G  V  +   A
Sbjct: 182 GPDMVRIYPTLVINGTQMEKLYYKGSFVPMTLKEA 216


>gi|213025130|ref|ZP_03339577.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 127

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 1/127 (0%)

Query: 51  FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI 110
           ++Q  L+++         R + +IF GGGTPSL+    +  +LDG+     ++++ EIT+
Sbjct: 1   YVQHLLSDLDADVAWAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLNLAADAEITM 60

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           EANP +VE + F  Y++AGVNRIS+GVQS  E  L+ LGR H   EA+ A  LA  +  R
Sbjct: 61  EANPGTVEADRFIDYQRAGVNRISIGVQSFSEPKLKRLGRIHGPQEAMRAARLANGLGLR 120

Query: 171 -MSFDLI 176
             + DL+
Sbjct: 121 SFNLDLM 127


>gi|320352216|ref|YP_004193555.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320120718|gb|ADW16264.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 335

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 2/203 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +++    C  +C +CD      +     + N +   +      R     R    +   
Sbjct: 5   IPIFIPHEGCPHRCIFCDQRRISGQVAPPVDSNGVAETIRVW-LARSRPDRRERVQVALY 63

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+ + +  +    +L  +          EI +   P  ++        + GV+ + LG 
Sbjct: 64  GGSFTGLPVERQRELLAAVQPFRRHGLVQEIRLSTRPDLIDSGRLDLLEEYGVSIVELGA 123

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS +++ LR  GR H  +    A    R     +   L+  LP  +       +   +S 
Sbjct: 124 QSCDDRVLRLAGRGHGGAAVEDAARQLRERGFGLGIQLMLGLPGDSFRILRQTVATVVSL 183

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
               + LY + + +G+   +++ 
Sbjct: 184 RPAFVRLYPVLVVRGSGLERLYH 206


>gi|296133568|ref|YP_003640815.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296032146|gb|ADG82914.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 362

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 79/231 (34%), Gaps = 3/231 (1%)

Query: 25  WP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
            P   C  +C +C+      +  +     +   + +          R +  + F GG+ +
Sbjct: 14  IPDLGCPNQCVFCNQKKITGQVNIPTAEEVAKKIGDYLATLPDVENRKVE-VAFYGGSFT 72

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            I        L      +       I I   P  ++ +        GV+ I LGVQS+++
Sbjct: 73  AIPVDEQRKFLRAAWDYYRTGKIQGIRISTRPDKIDEDTLSILMAYGVDTIELGVQSMDK 132

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             L F  R H     + A  L ++    +   ++  LP  +  +        +  + D +
Sbjct: 133 DVLAFARRGHATEHVVKAAKLVKSWGFFLGVQIMIGLPGDSQEKALKTCNEVIDLSPDFV 192

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +Y + + KGT   ++ + G       N  VD      +     G+    I
Sbjct: 193 RIYPVLVLKGTELERLFRQGKYSPWQVNEVVDTAKKMLNRFERAGIEVIRI 243


>gi|253581847|ref|ZP_04859071.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium varium
           ATCC 27725]
 gi|251836196|gb|EES64733.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium varium
           ATCC 27725]
          Length = 346

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 3/227 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +++    C   C +C+      R        ++     ++   +     S   + F 
Sbjct: 5   NIPIFISHFGCPNACVFCNQKKINGRETDVT---MEDLKETIETYLETLPKNSKKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + I        L+ + K         I +   P  +     +  +K GV  + LGV
Sbjct: 62  GGTFTGISFDLQRQYLETVHKYIKEGLIDGIRLSTRPDCINREIVEQLKKYGVTSVELGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+E+ L+   R +       A  L +     +   L+  LP+ T     +  ++AL  
Sbjct: 122 QSLDEKVLKATARYYPIEAVAKACSLLKEYNIELGIQLMIGLPESTFESDFLSAKKALEM 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             D   +Y   + KGT   +M K G+      N AV       S+  
Sbjct: 182 KPDVARIYPTLVIKGTKMEEMFKVGEYKALDINEAVKRTRKIYSLLE 228


>gi|187933884|ref|YP_001885439.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B str. Eklund 17B]
 gi|187722037|gb|ACD23258.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum B str. Eklund 17B]
          Length = 340

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 97/235 (41%), Gaps = 2/235 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C  KC +C+ +       +   + ++  +    ++  +T   +I  + F G
Sbjct: 8   IPIFVPQEGCPHKCVFCNQDRITGLKDIVTTDIVRKTID--DYLETITNKEAIIEVSFFG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + ++ +     L+            +I +   P +++       ++  V+ I LGVQ
Sbjct: 66  GTFTAVKEEKQRAFLEIAKGYKDKGLIDKIRLSTRPDAIDDYILTYLKEYKVDIIELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+++ L+  GR H  S+   A  L +     +   ++  LP  T  +  +  + ++   
Sbjct: 126 SLDDEILKKSGRGHYVSDVEKASALIKQYGFVLGHQIMPGLPGDTSEKDILTTKLSIKMK 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D   +Y   + K T   KM+K G  +  S + AV++      +   + +    I
Sbjct: 186 PDICRIYPALVIKDTPMEKMYKMGTYIPYSLDEAVEISKAMYELYLKNNIQVIRI 240


>gi|257462243|ref|ZP_05626660.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|317059912|ref|ZP_07924397.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313685588|gb|EFS22423.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 348

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 88/229 (38%), Gaps = 3/229 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +++    C   C +C+      +    +   ++     ++   +    +S   + F 
Sbjct: 5   NIPIFISHFGCPNHCVFCNQQKINGQETDIR---VEDIHRIVREYLKTLPKKSEKEVAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + +  +     L+ + +         I +   P  +     +  +K GV  I LG+
Sbjct: 62  GGTFTGLSMELQREYLETLQEYMERGDIQGIRLSTRPDYIRKEILEQLKKYGVKAIELGI 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL+E+ LR   R ++ ++ + +I   ++    +   L+  LP   + +    ++  ++ 
Sbjct: 122 QSLDEEVLRKSDRAYSETQVLESIRQIQDYGFEVGIQLMVGLPASNLEKEIRTVKTLIAC 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             D   +Y   +   T   K ++ G+    S   AV+   +        
Sbjct: 182 RPDTARIYPTLVLADTELEKQYRRGEYQALSLEEAVERSRILYCYLEEA 230


>gi|110803935|ref|YP_699004.1| radical SAM domain-containing protein [Clostridium perfringens
           SM101]
 gi|110684436|gb|ABG87806.1| radical SAM domain protein [Clostridium perfringens SM101]
          Length = 357

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 10/251 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQS--FLTEMQWMR 63
           G+    + ++V    C   C +C+        K         QEN + S      ++   
Sbjct: 2   GKRHYIIPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYKQENKVNSNFVRKTIEEYI 61

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G    I  + F GGT + I+      +L    +         I +   P  ++    
Sbjct: 62  ETIGEGDRILEVSFFGGTFTAIDINKQRELLAVAKEYKDKKIIDYIRLSTRPDYIDEFIL 121

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 122 DHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  +     + ++    D   +Y   I K T    M+ +G     +   AV +      +
Sbjct: 182 TFEKDIETTRESIKMKPDICRIYPALIVKNTPMEDMYLEGTYKPYTLEEAVYISAKLYKM 241

Query: 243 TSAHGLHAYEI 253
              + +    I
Sbjct: 242 YKENNIQVIRI 252


>gi|114566312|ref|YP_753466.1| ELP3 component of the RNA polymerase II complex [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114337247|gb|ABI68095.1| ELP3 component of the RNA polymerase II complex [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 362

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 84/218 (38%), Gaps = 3/218 (1%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ +++    C   C +CD N       +  E  + S +     +  +     +  I F 
Sbjct: 5   NIPIFIPHLGCPFTCVFCDQNRISATQDIPGEMEVLSIVEN--HLATIPAGSKVE-IAFF 61

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG  +++E     + L  I +         I I   P  ++       ++ GV  I LGV
Sbjct: 62  GGNFTMVEKARQEMYLATINRYLQDGRVQGIRISTRPDGIDAQILDFLQQWGVRTIELGV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL ++ L+   R + A++   A  L +    R+   L+  LP   +      + + +  
Sbjct: 122 QSLSDEVLKASWRGYQAADVFKACRLIKEYGFRLGIQLMIGLPGDRLELDMKTVAKVIEL 181

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             D + +Y   +  GT   K++  G  +  +   A+  
Sbjct: 182 RPDMVRIYPTLVIAGTYLEKLYLKGKYIPLTLAEALQN 219


>gi|34764148|ref|ZP_00145017.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27886081|gb|EAA23388.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 127

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 6/124 (4%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
           Y+H PFC +KC YCDF S ++      E ++   L E+    ++        +I+FGGGT
Sbjct: 8   YIHIPFCERKCNYCDFTS-LKGSDNQIEKYVNYLLKEIDIYSKEYDLSEKQDTIYFGGGT 66

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           PSL+   ++  IL   +       N EITIE NP +V++N  +GY+K G+NR+S+G+Q+ 
Sbjct: 67  PSLLPIDSLEKILSKFSY----DKNTEITIEVNPKTVDINKLKGYKKLGINRLSIGIQTF 122

Query: 141 EEQS 144
           +   
Sbjct: 123 DNDK 126


>gi|291557095|emb|CBL34212.1| Histone acetyltransferase [Eubacterium siraeum V10Sc8a]
          Length = 330

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 4/207 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              ++ V++    C   C +C+  +     +   E  ++S L     +  L    + + I
Sbjct: 2   KQTNISVFIPHYGCTHICSFCNQKTISGHSEPVTEKELESILEG--QLENLKDSGTKAQI 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAGVNR 132
            F GG+ + I+   +  +L                I     P  ++       +  G+  
Sbjct: 60  AFFGGSFTAIDRDYMIRLLTVAKHYTDAYPEQYDGIRCSTRPDCIDEEILGILKSYGMTA 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG QS+ ++ L    R H A +   A  L +     +   ++  L K T        +
Sbjct: 120 IELGAQSMNDEVLTANRRGHTAEDVRRASRLIKQSGFELGLQMMTGLYKDTEQYCIDTAK 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH 219
             ++   D + +Y   I K T   ++H
Sbjct: 180 EFIALHCDTVRIYPTVILKNTELGRLH 206


>gi|3913820|sp|P95506|HEMN_PASHA RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|1685093|gb|AAC44662.1| HEMN [Mannheimia haemolytica]
          Length = 146

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 53/110 (48%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
             +           L +YVH PFC K C +C  N  + R++   E ++     E++    
Sbjct: 37  EDFIRAAARYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAP 96

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
           L   R ++ I +G GTP+ ++    A ++  +  N+ VS + EI+IE +P
Sbjct: 97  LFQNRLVTQIHWGRGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDP 146


>gi|325849469|ref|ZP_08170764.1| HemN C-terminal domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480125|gb|EGC83199.1| HemN C-terminal domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 165

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 9/165 (5%)

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
             +++ V +++         GL  YEISN +    ES+HN  YW   DYI  G GA   +
Sbjct: 1   MEDDLEVVIFSYLVDSLDKLGLKRYEISNFAKASKESIHNKKYWNIDDYIAFGLGASGFL 60

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
               +    +  K    + K +R+  + +V +EF+  +++  E+++  LR  EGI+++++
Sbjct: 61  SNKRYNNTRNFVK----YDKAIREARYPIVFEEFIDKDEREKEYIIFKLRESEGINLREF 116

Query: 347 EMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           +     +  +   +     + Q F +         T++GM++ + 
Sbjct: 117 KEKFACDFLVKYQDVIEKFKDQDFYKLDDN--FYFTKKGMSLSNE 159


>gi|158521512|ref|YP_001529382.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158510338|gb|ABW67305.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 341

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 87/234 (37%), Gaps = 4/234 (1%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           TGQ    + V++    C  +C +CD ++    +  +  ++        +Q+     G   
Sbjct: 3   TGQRPFIVPVFLPHAGCPHRCVFCDQDAITGQKASLTADDLHDHVHRYLQYRGDNRGH-- 60

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
            + I F GG    +E +++  +L   +          I     P ++   N    +   V
Sbjct: 61  -AQIAFYGGNFLGLERESLTQMLHAASAFVDQGLVQAIRFSTRPDTITQKNLDLLKDYPV 119

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + +GVQS++++ L    R H A ++ AA+ L +         L+  LP          
Sbjct: 120 TTVEVGVQSMDDRVLEKARRGHTAEQSTAALLLLKQAGYETGAQLMTGLPGDDGRVSIET 179

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            ++      D   +Y   +  G+   + ++ G+ +  + + AV +         
Sbjct: 180 AKKVAVLKPDFARIYPTLVITGSPLARHYRQGEYMPQTLDAAVAVATTMCLTLE 233


>gi|153802602|ref|ZP_01957188.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124121865|gb|EAY40608.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 122

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 5/119 (4%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSI 71
              L +Y+H P+CV+KCPYCDFNSH ++ ++ ++ ++ + L     +++  +    PR +
Sbjct: 4   PPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLL 63

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
            SIF GGGTPSLI  + IA +L G+A+       +EIT+EA  P+ ++ +        G
Sbjct: 64  HSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEASTPARLKRSVLLAIAPLG 122


>gi|169342660|ref|ZP_02863701.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|169299166|gb|EDS81236.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
          Length = 357

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 10/251 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQS--FLTEMQWMR 63
           G+    + ++V    C   C +C+        K         QEN + S      ++   
Sbjct: 2   GKRHYIIPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYKQENKVNSNFVRKTIEEYI 61

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G    I  + F GGT + I+      +L    +         I +   P  ++    
Sbjct: 62  ETIGEGDRILEVSFFGGTFTAIDINKQRELLAVAKEYKDKKIIDYIRLSTRPDYIDEFIL 121

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 122 DHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  +     + ++    D   +Y     K T    M+ +G     +   AV +      +
Sbjct: 182 TFEKDIETTKESIKMKPDICRIYPALTVKNTPMEDMYLEGTYKPYTLEEAVYISAKLYKM 241

Query: 243 TSAHGLHAYEI 253
              + +    I
Sbjct: 242 YKENNIQVIRI 252


>gi|18310699|ref|NP_562633.1| radical SAM domain protein [Clostridium perfringens str. 13]
 gi|18145380|dbj|BAB81423.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 357

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 10/251 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQS--FLTEMQWMR 63
           G+    + ++V    C   C +C+        K         QEN + S      ++   
Sbjct: 2   GKRHYIIPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYKQENKVNSDFVRKTIEEYI 61

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G    I  + F GGT + I+      +L    +         I +   P  ++    
Sbjct: 62  ETIGEGDRILEVSFFGGTFTAIDINKQRELLAVAKEYKDKKIIDYIRLSTRPDYIDEFIL 121

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 122 DHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  +     + ++    D   +Y     K T    M+ +G     +   AV +      +
Sbjct: 182 TFEKDIETTKESIKMKPDICRIYPALTVKNTPMEDMYLEGTYKPYTLEEAVYISAKLYKM 241

Query: 243 TSAHGLHAYEI 253
              + +    I
Sbjct: 242 YKENNIQVIRI 252


>gi|221130431|ref|XP_002155084.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 153

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 7   YENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           + N      S S  +Y+HWP+C + CPYC+FN +V R  +  E  I+  L E Q M ++ 
Sbjct: 18  FLNKRNAHESKSATLYIHWPYCKQLCPYCNFNKYV-RDNIDNELMIKCLLIEFQSMCRMY 76

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             + I S++FGGGTPSL  P+ I  +L+ + K   V  N EI++E NP+S E      ++
Sbjct: 77  DVKKIKSVYFGGGTPSLAPPKLINRLLEEVCKYTNV--NCEISMEVNPTSTEKKKLSDFK 134

Query: 127 KAGVNRISLGVQ 138
            AG++R+S+GVQ
Sbjct: 135 SAGISRVSIGVQ 146


>gi|39997325|ref|NP_953276.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39984216|gb|AAR35603.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
 gi|307634986|gb|ADI84985.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter sulfurreducens KN400]
          Length = 342

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 77/201 (38%), Gaps = 12/201 (5%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  +C +CD     +    G+   + S       ++     R + +  F G
Sbjct: 7   VPFFISHQGCPHRCVFCD-----QERIAGRAGRLPSAAEIHSAVKTFGRGRPVEAA-FYG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +       +L  +       S   + +   P +++       +  GV  + LGVQ
Sbjct: 61  GTFTSLPRNEQERLLAALQPLRHDGSVRSVRLSTRPDALDAETAGFLKSMGVASVELGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+++Q L   GR H+A++ + A  + R+    +   L+  LP  +  +    L R L   
Sbjct: 121 SMDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPGDSRERSLDSLTRILDLK 180

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
              L +Y   +  GT   +  
Sbjct: 181 PVSLRIYPTLVVAGTRLAEFW 201


>gi|168214194|ref|ZP_02639819.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|182625853|ref|ZP_02953619.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
 gi|170714324|gb|EDT26506.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|177908887|gb|EDT71379.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
          Length = 357

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 10/251 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQS--FLTEMQWMR 63
           G+    + ++V    C   C +C+        K         QEN + S      ++   
Sbjct: 2   GKRHYIIPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYKQENKVNSDFVRKTIEEYI 61

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G    I  + F GGT + I+      +L    +         I +   P  ++    
Sbjct: 62  ETIGEGDRILEVSFFGGTFTAIDINKQRELLAVAKEYKDKKIIDYIRLSTRPDYIDEFIL 121

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 122 DHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  +     + ++    D   +Y     K T    M+ +G     +   AV +      +
Sbjct: 182 TFEKDIETTRESIKMKPDICRIYPALTVKNTPMEDMYLEGTYKPYTLEEAVYISAKLYKM 241

Query: 243 TSAHGLHAYEI 253
              + +    I
Sbjct: 242 YKENNIQVIRI 252


>gi|110800781|ref|YP_696404.1| radical SAM domain-containing protein [Clostridium perfringens ATCC
           13124]
 gi|168210650|ref|ZP_02636275.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
 gi|110675428|gb|ABG84415.1| radical SAM domain protein [Clostridium perfringens ATCC 13124]
 gi|170711265|gb|EDT23447.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 357

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 89/251 (35%), Gaps = 10/251 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQS--FLTEMQWMR 63
           G+    + ++V    C   C +C+        K         QEN + S      ++   
Sbjct: 2   GKRHYIIPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYKQENKVNSDFVRKTIEEYI 61

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G    I  + F GGT + I+      +L    +         I +   P  ++    
Sbjct: 62  ETIGEGDRILEVSFFGGTFTAIDINKQRELLAVAKEYKDKKIIDYIRLSTRPDYIDEFIL 121

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 122 DHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  +     + ++    D   +Y     K T    M+ +G     +   AV +     ++
Sbjct: 182 TFEKDIETTRESIKMKPDICRIYPALTVKNTPMEDMYLEGTYKPYTLEEAVYISAKLYNM 241

Query: 243 TSAHGLHAYEI 253
              + +    I
Sbjct: 242 YKENNIQVIRI 252


>gi|167751473|ref|ZP_02423600.1| hypothetical protein EUBSIR_02469 [Eubacterium siraeum DSM 15702]
 gi|167655281|gb|EDR99410.1| hypothetical protein EUBSIR_02469 [Eubacterium siraeum DSM 15702]
          Length = 330

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 4/207 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              ++ V++    C   C +C+  +     +   E  ++S L     +  L    + + I
Sbjct: 2   KQTNISVFIPHYGCTHICSFCNQKTISGHSEPVTEKELESILEG--QLENLKDSGTKAQI 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAGVNR 132
            F GG+ + I+   +  +L    +           I     P  ++       +  G+  
Sbjct: 60  AFFGGSFTAIDRDYMIRLLTVAKRYTDAYPEQYDGIRCSTRPDCIDEEILGILKSYGMTA 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG QS+ ++ L    R H A +   A  L +     +   ++  L K T        +
Sbjct: 120 IELGAQSMNDEVLTANRRGHTAQDVRRASRLIKQSGFELGLQMMTGLYKDTEQYCIDTAK 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH 219
             ++   D + +Y   I K T   ++H
Sbjct: 180 EFIALHCDTVRIYPTVILKNTELGRLH 206


>gi|291530280|emb|CBK95865.1| Histone acetyltransferase [Eubacterium siraeum 70/3]
          Length = 330

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 75/207 (36%), Gaps = 4/207 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              ++ V++    C   C +C+  +     +   E  ++S L     +  L    + + I
Sbjct: 2   KQTNISVFIPHYGCTHICSFCNQKTISGHSEPVTEKELESILEG--QLENLKDSGTKAQI 59

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAGVNR 132
            F GG+ + I+   +  +L    +           I     P  ++       +  G+  
Sbjct: 60  AFFGGSFTAIDRDYMIRLLTVAKRYTDAYPEQYDGIRCSTRPDCIDEEILGILKSYGMTA 119

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG QS+ ++ L    R H A +   A  L +     +   ++  L K T        +
Sbjct: 120 IELGAQSMNDEVLTANRRGHTAQDVRRASRLIKQSGFELGLQMMTGLYKDTEQYCIDTAK 179

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH 219
             ++   D + +Y   I K T   ++H
Sbjct: 180 EFIALHCDTVRIYPTVILKNTELGRLH 206


>gi|168217004|ref|ZP_02642629.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
 gi|182380985|gb|EDT78464.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
          Length = 357

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 10/251 (3%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV-------GQENFIQS--FLTEMQWMR 63
           G+    + ++V    C   C +C+        K         QEN + S      ++   
Sbjct: 2   GKRHYIIPIFVPHEGCPHDCVFCNQGKITGENKEIILGPKYKQENKVNSDFVRKTIEEYI 61

Query: 64  QLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +  G    I  + F GGT + I+      +L    +         I +   P  ++    
Sbjct: 62  ETIGEGDRILEVSFFGGTFTAIDINKQRELLAVAKEYKDKKIIDYIRLSTRPDYIDEFIL 121

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              +   V+ I LGVQSL+++ L   GR H   E + A  L +     +   ++  LP+ 
Sbjct: 122 DHLKSYKVDIIELGVQSLDKEVLHKSGRGHGYDEVLKASKLIKEYGFTLGHQIMVGLPED 181

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  +     + ++    D   +Y     K T    M+ +G     +   AV +      +
Sbjct: 182 TFEKDVETTKESIKMKPDICRIYPALTVKNTPMEDMYLEGTYKPYTLEEAVYISAKLYKM 241

Query: 243 TSAHGLHAYEI 253
              + +    I
Sbjct: 242 YKENNIQVIRI 252


>gi|197119570|ref|YP_002139997.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197088930|gb|ACH40201.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 342

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 88/235 (37%), Gaps = 12/235 (5%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  +C +CD                   L  +    +    R + +  F G
Sbjct: 4   VPFFIPHLGCPHRCVFCDQEKVAGASGGLPAP--AELLARVAQYAEKARGRDLEAA-FYG 60

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +   +   +L  +       +   + +   P SV+ +     +  GV  + LGVQ
Sbjct: 61  GTFTALPRADQERLLSPLQPLLAQGALKSLRVSTRPDSVDADTASFLKSFGVATVELGVQ 120

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S++ + LR  GR H+A+   +A+   +     +   L+  LP  +  +    L R L+ +
Sbjct: 121 SMDAEVLRLSGRGHDAASVESAVAALKEADIEVGIQLMPGLPGDSPARSLNSLSRVLALS 180

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              L +Y   +  GT   +M++ G     S   AV    L + +  A    +  +
Sbjct: 181 PSFLRIYPTLVISGTELSRMYEAGSYHPLSLQDAVS---LCKEMLVAANRESIPV 232


>gi|223986534|ref|ZP_03636532.1| hypothetical protein HOLDEFILI_03847 [Holdemania filiformis DSM
           12042]
 gi|223961474|gb|EEF65988.1| hypothetical protein HOLDEFILI_03847 [Holdemania filiformis DSM
           12042]
          Length = 360

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 132/368 (35%), Gaps = 38/368 (10%)

Query: 23  VHWPFC------VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +++PFC          P+      +      + +++++   E+          + +++ F
Sbjct: 11  INFPFCLQEENLAH--PF-----QILGDSQTKLDYMEALSREIHSAADDFQDVAFTAVKF 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G P+++    + ++L  I + + ++   E++IE  P++V V    G  +    R  L 
Sbjct: 64  -AGCPTIMNADKLGMLLHQIRQEYRLADFCEVSIETLPNTVCVPLLSGLSQGQPARFQLR 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           V SL+ + L  L       +   A+          +S  L   +P QT    +  L+  L
Sbjct: 123 VHSLQPRELLTLKVPFTLPDVQNAVLFLDEFRVNNVSMVLDLGIPGQTFVSLKRTLRSCL 182

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               DHL L      KG    K+ +   L              T       G  AY    
Sbjct: 183 EMEPDHLVLRPYLGPKGQADQKLQRRMLL-------------ATDEYLKEQGWIAYAPGL 229

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
           +             W  G+ +G G  A+S      +R      ++ E+++K        +
Sbjct: 230 YCKKECRDQFLSQLWLQGEVVGFGLDAYSCFDGYQYRNT----RNLETYIKEAENCQQLI 285

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSR 375
              + LSSE+ A    +  LR +  +  +        N+  E +  + ++  I R    +
Sbjct: 286 ENPQSLSSEEMA----IRKLRGQLLLDQQAAAEGYTENIQSEIDSFIHQECLINR--EGK 339

Query: 376 LRCTQRGM 383
           L  T  G+
Sbjct: 340 LSLTAEGL 347


>gi|51245098|ref|YP_064982.1| hypothetical protein DP1246 [Desulfotalea psychrophila LSv54]
 gi|50876135|emb|CAG35975.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 340

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 91/230 (39%), Gaps = 2/230 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFF 76
           + +++    C  +C +C+  S     +   +   ++  T  +W+ +  L G      + F
Sbjct: 5   IPLFIPHRGCPHQCLFCNQESITGCAEPKADYGEEAIATIEEWLARESLHGELREREVAF 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + +  +  A +L  +           I +   P  +  +  +      V ++ LG
Sbjct: 65  YGGSFTCLPEEEQARLLALVQPYIDRGLVDGIRLSTRPDCISKDIAEFLVAHRVKKVELG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+++  LR   R H+A +   AI + +    ++   L+  LP++T   +   L   + 
Sbjct: 125 VQSMDDGVLRAAKRGHSALDCRRAIAILQAAGLQVGVQLMAGLPRETTAIFLRGLDEIIG 184

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              D + LY + + + +    ++  G     S   AV   +L +      
Sbjct: 185 LRPDFVRLYPVVVVRHSELEDLYLKGRYQPISLAKAVAFGHLFRVRMDRA 234


>gi|297617465|ref|YP_003702624.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145302|gb|ADI02059.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 365

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 84/238 (35%), Gaps = 1/238 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              + +++    C  +C +C         K      +   + +       +    +  + 
Sbjct: 3   HRIIPIFIPHLGCPHRCVFCQQYRITGSEKPPSPLAVAETIEKGLQQSGASASEPVE-VA 61

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GG+ + +  Q +   L  +           I +   P ++ V   +   + GV  + L
Sbjct: 62  FYGGSFTSLPVQVMEGYLKAVQPYLATGKVASIRVSTRPDAISVEVLRLLIEHGVTTVEL 121

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQSL+ + L    R +   +   A  L R     +   L+  LPK T  +     +  +
Sbjct: 122 GVQSLDPEVLACAERGYTGRQVWEAAGLIRKHGLALGIQLMIGLPKDTREKDLATTRDVI 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 + +Y   + KGT  ++M + G     S   AVD+      +  A G+    +
Sbjct: 182 KMKPLMVRIYPTLVLKGTRLHQMWEQGLYSPLSMEEAVDITADMFIMLEAEGIKVIRM 239


>gi|15669323|ref|NP_248128.1| hypothetical protein MJ_1136 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496153|sp|Q58536|Y1136_METJA RecName: Full=Uncharacterized protein MJ1136
 gi|1591770|gb|AAB99138.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 541

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 76/355 (21%), Positives = 128/355 (36%), Gaps = 44/355 (12%)

Query: 28  CVK-KCPYCD------FN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  R            + ++Q+     Q  +      
Sbjct: 96  CPHGKCIFCPGGVGSVFGDVPQSYTGREPATMRGLMFNFDPYLQTKARIEQLEKVGHPTN 155

Query: 70  SISSIFFGGGTPSL---IEPQNIALILDGI--------AKNWTVSSNVE-----ITIEAN 113
            I  I  GG  P+     +   I   LD +         +   ++   E     + IE  
Sbjct: 156 KIELIIMGGTFPARDIEYQDWFIKRCLDAMNGVDASSLEEAQKINETAEHRCVALCIETR 215

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LGVQ++  + L F  R H   + I A  L ++   ++S+
Sbjct: 216 PDYCGEKEINQMLKLGATRVELGVQTIYNEILEFCKRGHTVEDTIKATQLLKDSGLKVSY 275

Query: 174 DLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            L+  +P   M   +    E+     +  D + +Y   + +GT  Y+M K G+     E 
Sbjct: 276 HLMPGMPGSDMEMDKKMFKEIFENPDFKPDMVKIYPCLVIEGTELYEMWKRGEYKPYREE 335

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSR 285
            A+++ +  +SI            +I     +      NL    ++Y +  GI       
Sbjct: 336 EAIEIISYAKSIMPKWVRTSRIQRDIPATVIVDGVKKSNLGELVYKYMEKHGIKCKCIRC 395

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
            +VG       I    E  +K+ R+   A    E FLS E   ++ L+  LRLRE
Sbjct: 396 REVGHVMYKKGIMPDIEH-IKLCREEYEASGGTEIFLSYEDVKNDILIAFLRLRE 449


>gi|306819681|ref|ZP_07453342.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304552247|gb|EFM40177.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 330

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 94/261 (36%), Gaps = 17/261 (6%)

Query: 28  CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C+       +  +  E   +  +  +  M++      I  I F GG+ + IE 
Sbjct: 3   CPNDCIFCNQVKISGQKTLLDYEAMREGIMDSISTMKE----TDIVEIAFFGGSFTAIEK 58

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +     L         +   V++ +   P +++    +   +  V+ + LGVQS++++ L
Sbjct: 59  EVQERCLSLANDIAGQIGRQVQVKLSTRPDAIDEEVIERLLRHKVDTVELGVQSMDDEVL 118

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R   R H++     A  L R    ++   L+  L   T  +    +Q+ +    D   +Y
Sbjct: 119 RLNNRGHDSKSVYDACKLIRKTNIKLGLQLMIGLLGDTKEKLYQTIQKVVDIGPDIARIY 178

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            + + K T   +++ +      S   AV              +    I      G ++  
Sbjct: 179 PVLVIKDTTLERLYHENKYQPISLEDAVIYAKDMYKSFENANIKVIRI------GLQATE 232

Query: 266 NLNYWRYGDYIGIGP--GAHS 284
           N+      D +  GP   A  
Sbjct: 233 NIAV--GKDMVA-GPFHSAFG 250


>gi|326203627|ref|ZP_08193491.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325986447|gb|EGD47279.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 338

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 4/235 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+      +     E  I+S    ++   + +G  + + I F G
Sbjct: 9   IPIFVPHKGCPFDCIFCNQKIISGQTNEASEKDIRS---TIESHLETSGN-AFTEIGFYG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I        L             +I +   P  +           GV  I LGVQ
Sbjct: 65  GSFTGISLSEQEWYLKIGYSYIKSGKVNQIRLSTRPDYINSEILDLLESYGVRTIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+   L+   R H+    I A  + ++    +    +  LP  T  +     ++ +  A
Sbjct: 125 SLDYHVLKCTNRGHDIEAVINAAKMIKDRGFSLGIQTMIGLPGDTGVKAVATARKVVELA 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D + +Y   + + T   KM+ +G     +   AVD+      I   + ++   I
Sbjct: 185 PDIVRIYPTLVIENTYLQKMYNEGRYQPLTVEEAVDISAELLDIYERNNINVIRI 239


>gi|16519766|ref|NP_443886.1| conserved hypothetical 27.8 kDa protein [Sinorhizobium fredii
           NGR234]
 gi|2493815|sp|P55477|Y4HJ_RHISN RecName: Full=Uncharacterized protein y4hJ
 gi|2182429|gb|AAB92448.1| conserved hypothetical 27.8 kDa protein [Sinorhizobium fredii
           NGR234]
          Length = 260

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 2/175 (1%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             Q      +S + FGGGTP++I+P++   ++D + +++       I +E  P +     
Sbjct: 55  AAQAPQALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEM 114

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALP 180
            +    A V+ +SLGVQS +    +   R    ++  AAI   R I   R++FDL+Y LP
Sbjct: 115 AEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLP 174

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            QT+         A++   D L+++       +         +  LP      + 
Sbjct: 175 HQTVQSCVQSATAAVAMRPDRLAVFGYAHVP-SYRKNQRLIDETALPDIAARAEQ 228


>gi|312127785|ref|YP_003992659.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777804|gb|ADQ07290.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 341

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+  +        +E  +     +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQKTI---SGEKEEVSLDRIKRQIEQGLKINPNEDVE-LAYYGGNFTAIDID 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++    +  +   V  I LG+QS+ +  L  
Sbjct: 71  FQKKLLELANSFERIKS---IRISTRPDCIDEERLRLLKLYNVRTIELGIQSMFDDVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T  +     +   S++ D   +Y  
Sbjct: 128 CARGHTAQHSKNAMEMIKKFGFLLGVQVMVGLPKSTPEKDIETAKILTSFSPDIARIYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            + +GT   KM++ G+    S N AV+  +  +SI    G++   +      G +    +
Sbjct: 188 LVIEGTYLAKMYRRGEYEPLSLNEAVERCSQIKSIFIEKGINVIRV------GLQPTEEI 241

Query: 268 NY 269
           NY
Sbjct: 242 NY 243


>gi|222529152|ref|YP_002573034.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455999|gb|ACM60261.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 341

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+  +        +E  +     +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQKTI---SGEKEEVSLDRIKRQIEQGLKINSDEEVE-LAYYGGNFTAIDID 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++    +  +   V  I LG+QS+ +  L  
Sbjct: 71  FQKKLLELANSFERIKS---IRISTRPDCIDEERLRLLKLYNVRTIELGIQSMFDHVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T  +     +   S++ D   +Y  
Sbjct: 128 SARGHTAQHSKNAMEMIKKFGFLLGVQVMVGLPKSTSEKDIETAKILTSFSPDIARIYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            + +GT   KM++ G+    S N AV+  +  +SI    G++   +      G +    +
Sbjct: 188 LVIEGTYLAKMYQRGEYEPLSLNEAVERCSQIKSIFIEKGVNVIRV------GLQPTEEI 241

Query: 268 NY 269
           NY
Sbjct: 242 NY 243


>gi|212697460|ref|ZP_03305588.1| hypothetical protein ANHYDRO_02030 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675544|gb|EEB35151.1| hypothetical protein ANHYDRO_02030 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 165

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 9/165 (5%)

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
             +++ VD+++         GL  YEISN +  G ES+HN  YW   DYI  G GA   +
Sbjct: 1   MEDDLEVDIFSFLVDELDKLGLKRYEISNFARFGKESIHNKKYWNIDDYIAFGLGASGFL 60

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
               +    +  K    + K +R+  + +V ++F+  +++  E+++  LR   GI++ ++
Sbjct: 61  SNKRYNNTRNFVK----YDKAIREARYPIVFEDFIDKDEREKEYIIFKLRESSGINLLEF 116

Query: 347 EMLAGRNLDI---ECERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           +     +  +   +     + Q F +         T++GM++ + 
Sbjct: 117 KEKFACDFLVKYKDVIEKFKDQDFYKLDDN--FYFTKKGMSLSNE 159


>gi|224368197|ref|YP_002602360.1| radical SAM domain family protein [Desulfobacterium autotrophicum
           HRM2]
 gi|223690913|gb|ACN14196.1| radical SAM domain family protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 359

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 4/227 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +++    C  KC +CD +     R  +  E  I+    +++      G R    + F 
Sbjct: 11  VPIFIPHQGCPHKCAFCDQSIITSERRALPHETQIR---QQVETWLGYRGDRRSVELAFF 67

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG    + P     +L    +         +     P ++   +     +  ++ + +GV
Sbjct: 68  GGNFLGLTPHETRTLLQITQQLILEKKIHSVRCSTRPDTIHEQSLDMASQFTLDTVEIGV 127

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+++Q L    R H A + I A  L  +        ++  LP  T  +     +     
Sbjct: 128 QSMDDQVLLKANRGHTAQDTIRAAKLLDDYKINKGMQMMVGLPGDTPDKAIETARVIADL 187

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               + +Y L + K +L +  +  G+    + +  V L      I  
Sbjct: 188 KPAFVRIYPLLVLKNSLVHHWYARGEYTPMALDDCVTLVAFLHEIFE 234


>gi|312793341|ref|YP_004026264.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180481|gb|ADQ40651.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 341

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+  +        +E        +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQKTI---SGEKEEVSFDRIKRQIEQGLKINPDEDVE-LAYYGGNFTAIDID 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++    +  +   V  I LG+QS+ +  L  
Sbjct: 71  FQKKLLELANSFERIKS---IRISTRPDCIDEERLRLLKLYNVKTIELGIQSMFDDVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T  +     +   S++ D   +Y  
Sbjct: 128 CARGHTAQHSKNAMEMIKKFGFLLGVQVMVGLPKSTPEKDIETAKILTSFSPDIARIYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            + +GT   KM++ G+    S   AV   +  +SI   +G++   I      G +    +
Sbjct: 188 LVIEGTYLAKMYQKGEYEPLSLYEAVVRCSQIKSIFIENGVNVIRI------GLQPTEEI 241

Query: 268 NY 269
           NY
Sbjct: 242 NY 243


>gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 349

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 98/271 (36%), Gaps = 16/271 (5%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
              N + +++    C   C +C+          +   +   + L  + + ++        
Sbjct: 2   AKRNIIPIFIPHYGCPNDCVFCNQRKITGMSTDISNSDVEDTILEYLSYFKRKDN----V 57

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            + F GG+ + I  +  +  L              I +   P +++    +  +K GV+ 
Sbjct: 58  EVAFYGGSFTAIPLEEQSEFLKVAHSYKEKGLVKYIRLSTRPDAIDDRILENLKKYGVDI 117

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQSL+ + L    R HNAS    A +L ++   ++    +  LP  T+ +     +
Sbjct: 118 IELGVQSLDPEVLILSNRGHNASCVYEAANLIKSYGFKLGLQQMVGLPGDTLEKSLYTAR 177

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +      + +Y   + K T   K  + G         ++       +I   H ++   
Sbjct: 178 EFVKLKPYCVRIYPTLVIKETALCKNLEKGSYKALELEDSIKYVADIINIYYRHDINVIR 237

Query: 253 ISNHSFLGAESLHNLNYWRYGDYIGIGPGAH 283
           +      G +   N+NY   GD +    GA 
Sbjct: 238 V------GLQPTDNINY--GGDIV---AGAF 257


>gi|312135001|ref|YP_004002339.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775052|gb|ADQ04539.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 341

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 95/242 (39%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+  +        +E  +     +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQKTI---SGEKEEVSLDRIKRQIEQGLKINSDEDVE-LAYYGGNFTAIDMT 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++    +  +   V  I LG+QS+ +  L  
Sbjct: 71  FQERLLELANSFERIKS---IRISTRPDCIDDERLRLLKLYNVRTIELGIQSMFDDVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T  +     +   S++ D   +Y  
Sbjct: 128 CARGHTAQHSKNAMEMIKKFGFLLGVQVMVGLPKSTPEKDIETAKILTSFSPDIARIYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            + +GT   KM++ G+    S N AV+  +  +SI    G++   +      G +    +
Sbjct: 188 LVIEGTYLAKMYQRGEYEPLSLNEAVERCSQIKSIFIEKGVNVIRV------GLQPTEEI 241

Query: 268 NY 269
           NY
Sbjct: 242 NY 243


>gi|194375752|dbj|BAG57220.1| unnamed protein product [Homo sapiens]
          Length = 187

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/122 (38%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            +YVHWP+C K+C YC+FN ++ R ++ +    +  +TE Q + +L+G + + S+FFGGG
Sbjct: 41  ALYVHWPYCEKRCSYCNFNKYIPR-RLEEAAMQKCLVTEAQTLLRLSGVQRVESVFFGGG 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           TPSL  P  +A +L+ +A+   + ++ E+T+EANP+S   +    +  AGVNR+S+G+Q 
Sbjct: 100 TPSLASPHTVAAVLEAVAQTAHLPADSEVTLEANPTSAPGSRLAEFGAAGVNRLSIGLQV 159

Query: 140 LE 141
             
Sbjct: 160 TH 161


>gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 341

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 91/247 (36%), Gaps = 15/247 (6%)

Query: 25  WP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
            P   C  KC +C+    +   K      +Q    +++          +  + + GG  +
Sbjct: 10  IPQYGCPFKCIFCNQ-KIISGEKEDVT--VQRIKRQIEEGLSKNKGEDVE-LAYYGGNFT 65

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            I+ +    +L+       + S   I I   P  ++       +   V  + LG+QS+ +
Sbjct: 66  AIDIKMQQKLLELARSFENIKS---IRISTRPDCIDKEILGFLKDYNVKTVELGIQSMFD 122

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             L    R H A +++ AI L ++    +   L+  LP  T  +     +    Y  +  
Sbjct: 123 DVLEASKRGHTAKDSVKAIELIKSFDFLLGVQLMVGLPNSTPEKDIKSAEILCRYQPNIA 182

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +Y   + + T   +M++ G+    S   AV + +  + I   + +    +      G +
Sbjct: 183 RIYPTLVIEDTYLAEMYQKGEYQPLSLEDAVLISSQIKEIFIDNSVKVIRV------GLQ 236

Query: 263 SLHNLNY 269
               +NY
Sbjct: 237 PTEEINY 243


>gi|118580197|ref|YP_901447.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118502907|gb|ABK99389.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 352

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 75/208 (36%), Gaps = 9/208 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C   C +CD  S         +   Q     +         R +  + F G
Sbjct: 6   VPFFISHQGCPHTCVFCDQRSISGSSGTLPDA--QEIAARIADWHGSAQGRPLE-VAFFG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +  Q    +L  +           I +   P +++  N       GV  I LGVQ
Sbjct: 63  GTFTALPRQIQQRLLAAVHPFLRSGVVSSIRVSTRPDALDAENVPWLAGQGVAIIELGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+++  L   GR H+A  ++ AI   R         LI  LP  T       L+R +   
Sbjct: 123 SMDDAVLEAAGRGHDARASLDAIRRIRENGLMAGAQLIPGLPGDTPATACASLERVIDAG 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           VD + +Y   + +GT   + + +G    
Sbjct: 183 VDFVRIYPTVVLRGTELARRYGEGTYHP 210


>gi|261403081|ref|YP_003247305.1| histone acetyltransferase, ELP3 family [Methanocaldococcus
           vulcanius M7]
 gi|261370074|gb|ACX72823.1| histone acetyltransferase, ELP3 family [Methanocaldococcus
           vulcanius M7]
          Length = 536

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 71/364 (19%), Positives = 127/364 (34%), Gaps = 46/364 (12%)

Query: 28  CVK-KCPYCD------FN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  R            + ++Q+     Q  +      
Sbjct: 92  CPHGKCIFCPGGVKSVFGDVPQSYTGREPATMRGLMFNFDPYLQTKARIEQLEKVGHPTN 151

Query: 70  SISSIFFGGGTPS---LIEPQNIALILDGI--------AKNWTVSSNVE-----ITIEAN 113
            I  I  GG  P+   + +   I   LD +         +   ++   E     + IE  
Sbjct: 152 KIELIIMGGTFPARDIVYQDWFIKRCLDAMNEIDSSSLEEAQKINETAEHRCVALCIETR 211

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LG Q++  + L    R H   + I A  L ++   ++S+
Sbjct: 212 PDCCGKEEINQMLKLGTTRVELGAQTIYNEILELCKRGHTVEDTIKATQLLKDSGLKVSY 271

Query: 174 DLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            L+  +P       +   +       +  D + +Y   + +GT  Y++ K+G      E 
Sbjct: 272 HLMPGMPGSDRDMDKKMFKEIFNNPDFKPDMVKIYPCLVIEGTELYELWKEGLYKPYREE 331

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSR 285
            A+++ +  +SI            +I     +      NL    ++Y +  GI       
Sbjct: 332 EAIEIISYAKSIMPKWVRTSRIQRDIPATVIVDGVKKSNLGELVYKYMEKKGIKCRCIRC 391

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVK 344
            +VG       I    E  +K+ R+   A    E FLS E   ++ L+  LRLR+    K
Sbjct: 392 REVGHVMYKKGIMPDIEH-IKLCREEYEASGGTEIFLSYEDVKNDILIAFLRLRD--PYK 448

Query: 345 DWEM 348
            +  
Sbjct: 449 PFRK 452


>gi|256811090|ref|YP_003128459.1| histone acetyltransferase, ELP3 family [Methanocaldococcus fervens
           AG86]
 gi|256794290|gb|ACV24959.1| histone acetyltransferase, ELP3 family [Methanocaldococcus fervens
           AG86]
          Length = 536

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 77/355 (21%), Positives = 129/355 (36%), Gaps = 44/355 (12%)

Query: 28  CVK-KCPYCD------FN----SHVRRYKV-------GQENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  R          G + ++Q+     Q  +      
Sbjct: 92  CPHGKCMFCPGGVGSVFGDVPQSYTGREPATMRGLMFGFDPYLQTKARIEQLEKVGHPTN 151

Query: 70  SISSIFFGGGTPS---LIEPQNIALILDGI--------AKNWTVSSNVE-----ITIEAN 113
            I  I  GG  P+     +   I   LD +         +   ++   E     + +E  
Sbjct: 152 KIELIIMGGTFPARDISYQDWFIKRCLDAMNGVEASSLEEAQKINETAEHRCVALCVETR 211

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LGVQ++  + L F  R H   + I A  L ++   ++S+
Sbjct: 212 PDYCGEKEINQMLKLGATRVELGVQTIYNEILEFCKRGHTVEDTIKATQLLKDSGLKVSY 271

Query: 174 DLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            L+  +P   M   +    E+     +  D + +Y   + KGT  Y+M K G+     E 
Sbjct: 272 HLMPGMPGSDMEMDKKMFREIFENPDFKPDMVKIYPCLVVKGTELYEMWKRGEYRPYREE 331

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSR 285
            A+++ +  +SI            +I     +      NL    ++Y +  GI       
Sbjct: 332 EAIEIISYAKSIMPKWVRTSRIQRDIPATVIVDGVKKSNLGELVYKYMEKHGIKCKCIRC 391

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
            +VG       I    E  +K+ R+   A    E FLS E   ++ L+  LRLRE
Sbjct: 392 REVGHVMYKKGIMPEIEH-IKLCREEYEASGGTEIFLSYEDVNNDILIAFLRLRE 445


>gi|220928139|ref|YP_002505048.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998467|gb|ACL75068.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 336

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 4/235 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+      +     E  I+S    ++   + +G   +  I F G
Sbjct: 7   IPIFVPHKGCPFDCIFCNQKIISGQIHESSEEEIRS---TIESHLETSGDAYVE-IGFYG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I        L             +I +   P  +         + GV  I LGVQ
Sbjct: 63  GSFTGISLSEQEWYLKIGYSYIKDGKVKQIRLSTRPDYINPTILDLLERYGVKTIELGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+   L+   R H   E + A  + ++    +    +  LP  T  +     ++ +  +
Sbjct: 123 SLDYDVLKCTNRGHGIEEVLNAAMMIKDRGFSLGIQTMIGLPGDTRAKAVATAKKVVELS 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            + + +Y   + K T   K++ DG     +   AVD+      I   H ++   I
Sbjct: 183 PNIVRIYPTLVIKNTFLQKLYYDGRYQPLTIEEAVDISAELLDIYEKHRINVIRI 237


>gi|302392425|ref|YP_003828245.1| radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302204502|gb|ADL13180.1| Radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 341

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 2/218 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + ++V    C   C +C+        +          +   +++  +    S   I F G
Sbjct: 8   IPIFVPHQGCPHDCVFCNQREITGFQEDMTPKKAARIIE--EYLSTMNKENSKIEIAFYG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + +E +    +L+   K         + +   P  ++        K  V  I LGVQ
Sbjct: 66  GSFTGLEIKEQTQLLEVAYKYCQEGIVDNLRLSTRPDYIDREILNNLAKYNVQIIELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL ++ L+   R H   +   A  L +     +   L+  LPK T       +Q+A+   
Sbjct: 126 SLADKVLQASCRGHTPEDVFKASRLIKKFGFELGIQLMPGLPKSTQESMFYSVQQAIGLT 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
            D + +Y   +  GT   + + +G+    +   AV++ 
Sbjct: 186 PDLVRIYPTLVIGGTKLAESYSEGEFTPLTLQEAVEIC 223


>gi|302872012|ref|YP_003840648.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574871|gb|ADL42662.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 341

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 97/242 (40%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+    +   K  +E  +     +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQ-KIISGEK--EEVSLDRIKRQIEQGLKINSDEHVE-LAYYGGNFTAIDID 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++    +  +   V  I LG+QS+ +  L  
Sbjct: 71  FQKKLLELANSFKKIKS---IRISTRPDCIDEERLRFLKLYNVKTIELGIQSMFDDVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T+ +     +   S++ D   +Y  
Sbjct: 128 CARGHTAQHSKNAMAMIKKFGFLLGVQVMVGLPKSTLEKDIETAKILTSFSPDIARVYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            + +GT   KM++ G+    S N AV+  +  +SI    G++   +      G +    +
Sbjct: 188 LVIEGTYLAKMYQRGEYEPLSLNEAVERCSQIKSIFIEKGVNVIRV------GLQPTEEI 241

Query: 268 NY 269
           NY
Sbjct: 242 NY 243


>gi|289192242|ref|YP_003458183.1| histone acetyltransferase, ELP3 family [Methanocaldococcus sp.
           FS406-22]
 gi|288938692|gb|ADC69447.1| histone acetyltransferase, ELP3 family [Methanocaldococcus sp.
           FS406-22]
          Length = 537

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 75/355 (21%), Positives = 125/355 (35%), Gaps = 44/355 (12%)

Query: 28  CVK-KCPYCD------FN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  R            + ++Q+     Q  +      
Sbjct: 92  CPHGKCIFCPGGVGSVFGDVPQSYTGREPATMRGLMFNFDPYLQTKARIEQLEKVGHPTN 151

Query: 70  SISSIFFGGGTPS---LIEPQNIALILDGI--------AKNWTVSSNVE-----ITIEAN 113
            I  I  GG  P+     +   I   LD +         +   ++   E     + IE  
Sbjct: 152 KIELIIMGGTFPAREIAYQDWFIKRCLDAMNGVDASSLEEAQKINETAEHRCVALCIETR 211

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LGVQ++  + L F  R H   + I A  L ++   ++S+
Sbjct: 212 PDCCGEKEINQMLKLGTTRVELGVQTIYNEILEFCKRGHTVEDTIKATQLLKDSGLKVSY 271

Query: 174 DLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            L+  +P   M   +   +       +  D + +Y   + +GT  Y+M K G      E 
Sbjct: 272 HLMPGMPGSDMEMDKKMFKEIFSNPDFMPDMVKIYPCLVIEGTELYEMWKKGLYKPYREE 331

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSR 285
            A+++    +SI            +I     +      NL    ++Y +  GI       
Sbjct: 332 EAIEIIAYAKSIMPKWVRTSRIQRDIPATVIVDGVKKSNLGELVYKYMEKHGIKCKCIRC 391

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
            +VG       I    E  +K+ R+   A    E FLS E   ++ L+  LRLRE
Sbjct: 392 REVGHVMYKKGIMPEIEH-IKLCREEYEASGGTEIFLSYEDVKNDILIAFLRLRE 445


>gi|312622597|ref|YP_004024210.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203064|gb|ADQ46391.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 341

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 92/242 (38%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+  +        +E  +     +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQKTI---SGEKEEVSLDRIKRQIEQGLKINLDEEVE-LAYYGGNFTAIDID 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++       +   V  I LG+QS+ +  L  
Sbjct: 71  FQKKLLELANSFERIKS---IRISTRPDCIDEERLILLKFYNVRTIELGIQSMFDHVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T        +   S++ D   +Y  
Sbjct: 128 CARGHTAQHSKNAMEMIKKFGFLLGVQVMVGLPKSTPEMDIETAKILTSFSPDIARIYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
            + +GT   KM++ G+    S N  V+  +  +SI    G++   +      G +    +
Sbjct: 188 LVIEGTYLAKMYQKGEYEPLSLNETVERCSQIKSIFIEKGVNVIRV------GLQPTEEI 241

Query: 268 NY 269
           NY
Sbjct: 242 NY 243


>gi|167771631|ref|ZP_02443684.1| hypothetical protein ANACOL_03003 [Anaerotruncus colihominis DSM
           17241]
 gi|167666271|gb|EDS10401.1| hypothetical protein ANACOL_03003 [Anaerotruncus colihominis DSM
           17241]
          Length = 332

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 78/236 (33%), Gaps = 2/236 (0%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           ++ V+V    C  +C +CD  +            + +     +   +L      + I F 
Sbjct: 5   NVSVFVPHAGCPHQCSFCDQRAISGAQAAPDGAAVAALCARAE--GELAQKGRTAQIAFF 62

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG+ + +    +  +L+             + I   P  ++        + GV  + LG 
Sbjct: 63  GGSFTAVPRAYMIELLEAARPFLGRGVFTGVRISTRPDCIDDETLDTLARYGVTAVELGA 122

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+++  L   GR H A++   A  L R     +   ++  L         M  +   + 
Sbjct: 123 QSMDDTVLSKNGRGHTAADTNRASALVRAHGLELGLQMMTGLYGANGASDLMSARLIAAL 182

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               + +Y   + +GT    + + G     +   A  L           G+    +
Sbjct: 183 MPATVRVYPTLVLEGTRLAALWRAGLYRPQTHQEAAALGARLLEFFETRGMRVIRM 238


>gi|242281193|ref|YP_002993322.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242124087|gb|ACS81783.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 344

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 85/243 (34%), Gaps = 9/243 (3%)

Query: 25  WPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ---LTGPRSISSIFFGGG 79
            PF  C  KC YC       R        +     +++         G R    + F GG
Sbjct: 23  MPFMGCPTKCIYCSQ----DRQTGTGAKTLSEIYQDIEHEIPTFFAQGNRKPLELAFFGG 78

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           T + +  +     +   AK        ++     P  +E +     R++G++ I LG+QS
Sbjct: 79  TFTALPFEWQQRFILLAAKFKQKGFLTKVRCSTRPDCIESDQILKLRESGLDMIELGIQS 138

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              + LR   RN++   AI A    R     +   L+  LP      ++ ++ + +    
Sbjct: 139 FSAEVLRRSARNYSPETAINACRTIRESGLSLGIQLLPGLPGTKRGDFQRDISQTIGLKP 198

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D + +Y     KGT   K++  G     S +   +           H +H   I      
Sbjct: 199 DAVRIYPCLTVKGTGLEKLYLAGKYTPWSLSRTEEELAPALLRLWQHKIHVIRIGVAHEE 258

Query: 260 GAE 262
           G E
Sbjct: 259 GFE 261


>gi|45359140|ref|NP_988697.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           S2]
 gi|45048015|emb|CAF31133.1| Histone acetyltransferase [Methanococcus maripaludis S2]
          Length = 540

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 132/365 (36%), Gaps = 48/365 (13%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C      +F     S+  +            + ++Q+     Q  +      
Sbjct: 96  CPHGKCSFCPGGKESNFGDVPQSYTGKEPATMRGVMYNFDPYVQTSERISQLEKVGHPTD 155

Query: 70  SISSIFFGGGTPS---------------LIEPQNIALILDGIAKNWTVSSNV-EITIEAN 113
            +  I  GG  P+                +  +    +     KN T       +T+E  
Sbjct: 156 KVELIIMGGTFPARDIEYQENFIKRCLDAMNGEVSETLEKAQEKNETAKHRCVALTLETR 215

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LG+QS  ++ L F+ R H    +I A  L ++   ++S+
Sbjct: 216 PDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLKDSGLKVSY 275

Query: 174 DLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            LI  LPK T    +  ++       +  D +  Y   +  GT  Y++ + G+    ++ 
Sbjct: 276 HLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSGEFNPMTDE 335

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISN---HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            AV++    +SI            +I      + +   +L  L Y    +  GI      
Sbjct: 336 QAVEVITYGKSIMPKWIRTSRIQRDIPVTVIDAGVKKSNLGELVYNNLEEK-GIKCKCIR 394

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISV 343
             +VG       I+   ES +K+ R++  +   KE FLS E   ++ L+  LRLR  I  
Sbjct: 395 CREVGHVTYKKGIKPDLES-IKLCREDYESSGGKEIFLSFEDTKNDLLIGYLRLR--IPN 451

Query: 344 KDWEM 348
             +  
Sbjct: 452 NPFRK 456


>gi|298530307|ref|ZP_07017709.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509681|gb|EFI33585.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 351

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 75/213 (35%), Gaps = 5/213 (2%)

Query: 21  VY-VHWPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +Y V  PF  C  KC YC   +   +     E  +Q    ++  +          S+ F 
Sbjct: 20  LYPVFLPFSGCPFKCIYCSQEAQTGQQPTPHEVQVQRIHQDICTL--FKKKPEPFSLGFF 77

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GGT + +      L L    +     +   I     P  ++    +  R  GV+ + LG+
Sbjct: 78  GGTFTALPAATQKLFLKTALELRRAGAVSHIRCSTRPDCIDQGRIRLLRDYGVDMVELGI 137

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS + + L    R +   EA+ A    +     +   L+  LP      +  +LQ     
Sbjct: 138 QSFDSRVLSLSKRGYGGEEALDASMRIKQNSLELGIQLMPGLPGSDSASFARDLQATAEM 197

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
               + LY   + + TL  +    G+      N
Sbjct: 198 QPAVVRLYPCLVLEDTLLARQWSRGEYRPWPLN 230


>gi|116748320|ref|YP_845007.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697384|gb|ABK16572.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 359

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 72/237 (30%), Gaps = 5/237 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-----MRQLTGPRS 70
                V++    C  +C YC+ N+        +    Q  L   +               
Sbjct: 15  ERIYPVFLPHAGCPFRCVYCNQNAVTAPCGPSESGTAQDILRIFRLGLDRLTADARRCGI 74

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GGT + +    +  ILD +           I     P ++     +      V
Sbjct: 75  AGEISFYGGTFTSLPIAVLRQILDTVNVPIKEGLFTGIRFSTRPDALTEPCLELLSDYPV 134

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LGVQSL E  L    R +       A    R    R+   L+  LP  T   +   
Sbjct: 135 RTVELGVQSLSETVLERSRRGYGVRTVERACAAVRARGWRLGLQLMPGLPGDTCEVFLES 194

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L+R +    + + LY   + K T     ++ G     S   AV       +      
Sbjct: 195 LRRTIGLGPEFVRLYPTLVLKDTTLADWYRAGSYRPLSLEEAVRWCARAYAALREAH 251


>gi|125973447|ref|YP_001037357.1| radical SAM family protein [Clostridium thermocellum ATCC 27405]
 gi|256005343|ref|ZP_05430308.1| Radical SAM domain protein [Clostridium thermocellum DSM 2360]
 gi|281417647|ref|ZP_06248667.1| Radical SAM domain protein [Clostridium thermocellum JW20]
 gi|125713672|gb|ABN52164.1| Radical SAM [Clostridium thermocellum ATCC 27405]
 gi|255990662|gb|EEU00779.1| Radical SAM domain protein [Clostridium thermocellum DSM 2360]
 gi|281409049|gb|EFB39307.1| Radical SAM domain protein [Clostridium thermocellum JW20]
 gi|316940316|gb|ADU74350.1| Radical SAM domain protein [Clostridium thermocellum DSM 1313]
          Length = 338

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 83/235 (35%), Gaps = 3/235 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C   C YC+   ++   K       +  ++ ++         +   I F G
Sbjct: 8   IPIFIPHKGCPFDCIYCNQ-KYISGQKDDMTE--EKMISIIESHIDSACEDTYIEIGFYG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + IE +     L+   +         I +   P  +         K  V  I LGVQ
Sbjct: 65  GSFTGIEREEQYRYLETANRYIKEGKVKSIRLSTRPDYINEEILDYLEKYSVKTIELGVQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+ + L    R H+  +   A  L +     +    +  LP  +  +     +  +   
Sbjct: 125 SLDREVLEKSCRGHSVEDVYNASALIKKRGFVLGIQTMIGLPGDSRKKALHTAEEVVKIK 184

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D L +Y   + +GT   KM+  G+        AV+L      I   + ++   I
Sbjct: 185 PDILRIYPTLVVRGTYLEKMYIKGEYTPLELEEAVELCAELLYIYKKNNINVIRI 239


>gi|291542642|emb|CBL15752.1| Histone acetyltransferase [Ruminococcus bromii L2-63]
          Length = 313

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 80/218 (36%), Gaps = 4/218 (1%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+ N    +        ++  L   +    L      + I F GG+ + I+   +  
Sbjct: 2   CSFCNQNKITGQAYQPTPLDVEQTLD--KAASDLGERTKNAEIAFFGGSFTAIDRTYMLS 59

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           +LD   K         I I   P  ++       +  GV  I LG QS+ +  L    R 
Sbjct: 60  LLDATKKFR--DKFCGIRISTRPDYIDKEILDILKSYGVTSIELGAQSMSDDVLFANDRG 117

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+A     +  L ++    +   ++  L K  + +     +  +    D + +Y   I K
Sbjct: 118 HSAESVFKSSELIKSYGFSLGLQMMTGLYKSDIQKDLYTAETFVKINPDTVRIYPTVIMK 177

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            T   +++ +G+    S   +V+L +    +   + + 
Sbjct: 178 DTKLAELYLNGEYTPYSLEKSVNLCSKLIELFEKNNIK 215


>gi|304570579|ref|YP_387011.2| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 341

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 4/217 (1%)

Query: 25  WPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
            PF  C  +C +C   +                  E+Q   +     S   + + GGT +
Sbjct: 23  IPFAGCPGRCVFCAQTAQTGVGPAALSERYSQLQKELQLAYE--AGESPFELAYYGGTFT 80

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            ++       +    +         I     P  V+V   Q   + G++ + LG+QS   
Sbjct: 81  ALDDMWQEKFIALGRQYRHKGLVTSIRCSTRPDCVDVAGLQRLHRMGLDTVELGIQSFSN 140

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +L   GR + A  A+    + R     +   L+  LP  +   +  +++ A S   D +
Sbjct: 141 DALTRSGRGYTAHTAVTGCRIVREAGLGLGIQLMPGLPGHSEGAFLRDVRTACSLGPDMV 200

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            LY   + +GTL     +DG         A  +  + 
Sbjct: 201 RLYPCLVFEGTLLASWWRDGRYRPWGVARASVMLGMA 237


>gi|238019507|ref|ZP_04599933.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
 gi|237864206|gb|EEP65496.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
          Length = 380

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 7/235 (2%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C   C +C+  S +                 +              + F G
Sbjct: 7   IPFFIPHVGCPYVCTFCNQ-SRITGQSGISHLTPDYIKKTITDYVGKKRNDKFWEVAFYG 65

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I       +L+   +         I     P +V        +  GV  + LGVQ
Sbjct: 66  GSFTAIHRDLQHTLLEPAYEMLQQDIIDGIRCSTRPDAVGDKAITLLQSYGVKTVELGVQ 125

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+ +  L    R H A E + A+   +     +   L+  L  +T           +   
Sbjct: 126 SMNDGILVDAKRGHTAQEVVDAVARLKQRGMTVGVQLLPGLKGETWETILETAIAVVKLE 185

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D + +Y + + + T     ++ G+    S   A+      +     H +     
Sbjct: 186 PDFVRIYPVLVIENTELADQYRSGEYEPLSTEQAIKYCAFLKEWFEQHNIEVIRT 240


>gi|227484650|ref|ZP_03914966.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227237370|gb|EEI87385.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 356

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 86/247 (34%), Gaps = 12/247 (4%)

Query: 25  WPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFGGGTP 81
            PF  C   C +C+         +  EN   S + +++        +     I F GG+ 
Sbjct: 10  IPFLGCPHDCAFCNQVKITNYKDMADEN---SIIKQIEDYLTYFKDKKTAKEIAFYGGSF 66

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  + +   L              I +   P  +        +   V+ I LG+QS +
Sbjct: 67  TGLPYETMVSYLKIAGIYKKKGIIDRIRLSTRPDYINNFILDTLKAYEVDTIELGIQSFD 126

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L    R H+A ++  A  L ++   ++   ++  L K  M +       +     D 
Sbjct: 127 DEVLAANERGHSALDSKRASKLIKDYGFKLGHQIMPGLYKDKMEKIIKTALESAKIKPDI 186

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
             +Y   + K T   K +KDG     S   AV    ++  I            N   +G 
Sbjct: 187 ARIYPTLVIKDTKLEKFYKDGLYQPLSLEEAV---EISAEILMIFAYKDI---NVIRIGL 240

Query: 262 ESLHNLN 268
           +   N+N
Sbjct: 241 QPTENIN 247


>gi|282849041|ref|ZP_06258430.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282581316|gb|EFB86710.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 399

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 11/237 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +    +  +      +IQ     ++             + F
Sbjct: 7   IPFFIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQ---QTIKDYVGTKRNEKFWEVAF 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I       +L    +         I     P +V        +  GV  + LG
Sbjct: 64  YGGSFTAITKDLQHKLLMPAYEILQQGLIDGIRCSTRPDAVGDEAITLLQSYGVKTVELG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+ +  L    R H A E + A+   ++    +   L+  L  +T           ++
Sbjct: 124 VQSMNDGILVDAKRGHTAQEVVEAVTRLKHRDMTVGVQLLPGLKGETWQTIIETAIAVVA 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D + +Y + + + T     ++ G+    S  +A+   +  +     HG+     
Sbjct: 184 LRPDFVRIYPVLVIENTELADQYRAGEYKPLSTELAIQYCSFLKDWFEQHGIEVIRT 240


>gi|206895763|ref|YP_002246862.1| oxygen-independent coproporphyrinogen III oxidase
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738380|gb|ACI17458.1| oxygen-independent coproporphyrinogen III oxidase
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 258

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 78/216 (36%), Gaps = 13/216 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C ++C +C+               I+ +   ++         ++    I F GGTP+   
Sbjct: 13  CRQRCVFCN---------QRAAERIKPWKESIEEAFHYIQKSNLVYDEIAFYGGTPTS-S 62

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  IL        +     I I   P  +  +  Q     GV+ + +GV+S  ++ L
Sbjct: 63  ENLLKDILQPFQTFLKIGKIKGIRISTRPDEINESIIQILVDYGVSTVEIGVESFSDEVL 122

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R   R H   +   A  L +  F  + F L+  LP +T    E  + + +S     +  +
Sbjct: 123 RLSKRGHTEEDVKRAHELLKGRFREV-FQLMVGLPGETDRHREETISKTVSLKPWGVRYF 181

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              + +GT   KM++ G     S   A+        
Sbjct: 182 PTLVLRGTELQKMYESGTYQPLSMEEALYWSRRAYE 217


>gi|212695675|ref|ZP_03303803.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677348|gb|EEB36955.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 358

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 12/247 (4%)

Query: 25  WPF--CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            PF  C   C +C+       +  + +EN I+     + +      P+ I+   F GG+ 
Sbjct: 12  IPFLGCPHDCAFCNQVKITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIA---FFGGSF 68

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +E   +   L+             I +   P  +  +     +K  V+ I LG+QSL+
Sbjct: 69  TGLETDVMISYLEIALAYKKKGIIDRIRLSTRPDYINNSILDILKKYEVDVIELGIQSLD 128

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            + L    R H+  ++I A  L +    ++   ++  L K +          ++    D 
Sbjct: 129 NEILNANERGHSREDSIKASKLIKEYGFKLGHQIMPGLYKDSYDSAINTGLESIKMNPDM 188

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +Y   + K T   K++K+      + + A+D+ +    I S   +    I      G 
Sbjct: 189 VRIYPTLVIKDTKLEKLYKENLYKPLTLDEAIDISSKLYMIYSYKNIPVIRI------GL 242

Query: 262 ESLHNLN 268
           +   N+N
Sbjct: 243 QPTENIN 249


>gi|325849067|ref|ZP_08170559.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480312|gb|EGC83375.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 358

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 12/247 (4%)

Query: 25  WPF--CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            PF  C   C +C+       +  + +EN I+     + +      P+ I+   F GG+ 
Sbjct: 12  IPFLGCPHDCAFCNQVKITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIA---FFGGSF 68

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +E   +   L+             I +   P  +  +     +K  V+ I LG+QSL+
Sbjct: 69  TGLETDVMISYLEIALAYKKKGIIDRIRLSTRPDYINNSILDILKKYEVDVIELGIQSLD 128

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            + L    R H+  ++I A  L +    ++   ++  L K +          ++    D 
Sbjct: 129 NEILNANERGHSREDSIKASKLIKEYGFKLGHQIMPGLYKDSYDSAINTGLESIKMNPDM 188

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +Y   + K T   K++K+      + + A+D+ +    I S   +    I      G 
Sbjct: 189 VRIYPTLVIKDTKLEKLYKENLYKPLTLDEAIDISSKLYMIYSYKNIPVIRI------GL 242

Query: 262 ESLHNLN 268
           +   N+N
Sbjct: 243 QPTENIN 249


>gi|294791673|ref|ZP_06756821.1| radical SAM domain protein [Veillonella sp. 6_1_27]
 gi|294456903|gb|EFG25265.1| radical SAM domain protein [Veillonella sp. 6_1_27]
          Length = 391

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 11/237 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +    +  +      +IQ     ++             + F
Sbjct: 2   IPFFIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQ---QTIKDYVGTKRNEKFWEVAF 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I       +L    +         I     P +V        +  GV  + LG
Sbjct: 59  YGGSFTAITKDLQHKLLMPAYEMLQQGLIDGIRCSTRPDAVGDEAITLLQSYGVKTVELG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+ +  L    R H A E + A+   ++    +   L+  L  +T            +
Sbjct: 119 VQSMNDGILVDAKRGHTAQEVVEAVTRLKHRDMTVGVQLLPGLKGETWQTIIETAIAVAA 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D + +Y + + + T     ++ G+    S  +A+   +  +     HG+     
Sbjct: 179 LRPDFVRIYPVLVIENTELADQYRAGEYEPLSTELAIQYCSFLKDWFEQHGIEVIRT 235


>gi|291165575|gb|EFE27624.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
          Length = 373

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 88/241 (36%), Gaps = 3/241 (1%)

Query: 13  GQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
            +   ++ ++V    C   C +C+         + +E  +      ++         +  
Sbjct: 6   RKKKITIPIFVPHKGCPNDCVFCNQRKITG---MTEEMTVSRAKATIEEFLSEKREDAFY 62

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
            I F GG+ + I       +L    +         + I   P +++    +  ++ GV  
Sbjct: 63  EIAFFGGSFTAISDARRVELLQLAHQYILSGEVKSVRISTRPDAIDEMILEELQQYGVQV 122

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LGVQSL+E+ L+   R H+A+    +  L +    ++   ++  LP  +         
Sbjct: 123 IELGVQSLDERVLQESNRGHDAACVYRSAKLIQEYGFQLGLQMMIGLPFDSEETIWFTAN 182

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++   D + +Y   + + T      K+G     S   AV+     + + + H +    
Sbjct: 183 EFVNIKPDMVRIYPTLVVEDTKLATWMKEGKYQPLSLEQAVEQAKKCKVLFACHDIPVIR 242

Query: 253 I 253
           +
Sbjct: 243 M 243


>gi|91201666|emb|CAJ74726.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 356

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 9/232 (3%)

Query: 22  YVHWP-F-----CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           Y + P F     C  +C +C+       Y + Q   I+  +       +      I +I 
Sbjct: 26  YSNIPIFIPELACPHQCVFCNQAKISGTYSIPQPKEIRHIV---AQYLETIPENRIINIA 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GG+ + I        L              I +   P  +     +  +K GV  I L
Sbjct: 83  FFGGSFTGIPVDLQEQYLKEAYGFVKNGKVSGIRLSTRPDYINETILELLKKYGVTTIEL 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS  ++ L   GR H   +   A  + R     +   ++  LP+ +  +        +
Sbjct: 143 GAQSTSQKVLNQSGRGHTREDIQNASRMIRTYGFELGLQMMIGLPEDSYKRSIQTANDIV 202

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           S+   +  +Y   I KGT   K +++G  +  S   AV        I  ++ 
Sbjct: 203 SFGARNTRIYPAIIVKGTALEKRYREGKYIPLSLEQAVVWTKDLVRIFESNN 254


>gi|254502879|ref|ZP_05115030.1| hypothetical protein SADFL11_2918 [Labrenzia alexandrii DFL-11]
 gi|222438950|gb|EEE45629.1| hypothetical protein SADFL11_2918 [Labrenzia alexandrii DFL-11]
          Length = 398

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 129/362 (35%), Gaps = 33/362 (9%)

Query: 50  NFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
            F+     E+           R IS+++FGGGT S++ P  I  IL  +   +   ++ E
Sbjct: 8   RFVDQICAEIDLTAAQLHFTGRRISALYFGGGTASVLTPAMIERILTKLTDTFRFEADAE 67

Query: 108 ITIEANPSSVEV-NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           +T E    S+      +  R  G  R+S GVQ+++E     L    + ++       A  
Sbjct: 68  MTFEGECRSLSRRGYLEEVRNFGFRRVSFGVQTMDETFREILNLKPSVADLGLLRGRAEA 127

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDHLSLYQLT-IEKGTLFYKMHKDGDL 224
           +F  +  D IY  P         +++  L   A   + L++   +E    F +   +  L
Sbjct: 128 LFDEVCIDFIYGWPGLGRGHLAADIRALLDVIAPTSIELFRFEKLEASPKFLQCLYETGL 187

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY----------WRYGD 274
                   +  Y   Q      GL     S  S  G    H+LNY          +   +
Sbjct: 188 RDLDTATLLAQYADAQKCFVEAGLPQVSYSKFSRDG----HSLNYDESYSAHFYGFDNAN 243

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG 334
            +G G GA S V        +   +H     +++++    +        +++  E +   
Sbjct: 244 VLGFGRGAQSFVDGRMWSFGLQEHEH----AQLLQQGVLPIGIFATYRRDER--EAVSWP 297

Query: 335 LRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMT----MLDSVI 390
            R   G    D              + L R G+I R + +  + T+RG      +L  ++
Sbjct: 298 RRGHIG---ADVVARYRDPEYPARLQALLRAGYIMRNEDAY-QLTERGWLWVPNLLHYLM 353

Query: 391 AN 392
             
Sbjct: 354 PR 355


>gi|159905477|ref|YP_001549139.1| ELP3 family histone acetyltransferase [Methanococcus maripaludis
           C6]
 gi|159886970|gb|ABX01907.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           C6]
          Length = 541

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 124/363 (34%), Gaps = 44/363 (12%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C      +F     S+  +            + ++Q+     Q  +      
Sbjct: 96  CPHGKCSFCPGGKESNFGDVPQSYTGKEPATMRGVMYNFDPYVQTSERLSQLEKVGHPTD 155

Query: 70  SISSIFFGGGTPS---------------LIEPQNIALILDGIAKNWTVSSNV-EITIEAN 113
            +  I  GG  P+                +  +    +     KN T       +T+E  
Sbjct: 156 KVELIIMGGTFPARDIEYQENFIKRCLDAMNGEVSETLEQAQEKNETAKHRCVALTLETR 215

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LG+QS  ++ L F+ R H    +I A  L ++   ++S+
Sbjct: 216 PDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGIDASIKATQLLKDSGLKVSY 275

Query: 174 DLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            LI  LPK T    +  ++       +  D +  Y   +  GT  Y++ + G+ +  ++ 
Sbjct: 276 HLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSGEFIPMNDE 335

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLNYWRYGDYI--GIGPGAHSR 285
            AV++    +SI            +I            NL    Y +    GI       
Sbjct: 336 QAVEVITYGKSIMPKWVRTSRIQRDIPVTVIDAGVKKSNLGELVYNNLEENGIKCKCIRC 395

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
            +VG       I+   ES          +  ++ FLS E   ++ L+  LRLR  I    
Sbjct: 396 REVGHVTYKKGIKPDLESITLCREDYESSGGKEIFLSFEDTKNDLLIGYLRLR--IPNNP 453

Query: 346 WEM 348
           +  
Sbjct: 454 FRK 456


>gi|256830729|ref|YP_003159457.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579905|gb|ACU91041.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 344

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 79/211 (37%), Gaps = 7/211 (3%)

Query: 26  PF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           PF  C  +C +CD ++      +  E+ +++    +                F G     
Sbjct: 27  PFAGCPSRCVFCDQHAQTGLGGLRLEDALEALRDRLAREDGGAFGLGFFGGTFTGL---- 82

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                    L+  ++       V + +   P  V+  + +  R +GV+ I LGVQS    
Sbjct: 83  -SLAWQERFLELASRFAGPGGLVHLRVSTRPDRVDAESLRRLRGSGVSMIELGVQSFSSA 141

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L   GR ++ + A  A  + R     +   L+  LP      W  +++R L+ A D + 
Sbjct: 142 VLATSGRGYDGAVAAGACDMVRAAGLELGIQLLPGLPGHDAPLWREDVRRTLALAPDVVR 201

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +Y   + +GT    ++  G+        AV 
Sbjct: 202 IYPCVVVRGTGLAALYDRGEYAPWPLETAVQ 232


>gi|156336954|ref|XP_001619757.1| hypothetical protein NEMVEDRAFT_v1g223855 [Nematostella vectensis]
 gi|156203563|gb|EDO27657.1| predicted protein [Nematostella vectensis]
          Length = 211

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/152 (38%), Positives = 99/152 (65%), Gaps = 1/152 (0%)

Query: 46  VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           V  E   +  + E + + +++G ++I+S++FGGGTPSL +P   + IL+ + +   ++ N
Sbjct: 54  VDHERMKKCLVKECKSLLEISGAKTINSVYFGGGTPSLAKPSTFSAILECLQQKGVLNPN 113

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
            E+T+EANP+S E +  + ++ AG+NR+SLGVQSL E  L  LGR  +  E++ ++ +A+
Sbjct: 114 AEVTLEANPTSAESHKLRDFKTAGINRLSLGVQSLSEDELAVLGRQGSCLESLKSLDMAK 173

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALS 196
            +FP R+S DL++  PKQT  +WE EL+    
Sbjct: 174 VLFPGRVSVDLMFGRPKQTAPEWERELEEFYK 205


>gi|313892708|ref|ZP_07826289.1| radical SAM protein, TIGR01212 family [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442639|gb|EFR61050.1| radical SAM protein, TIGR01212 family [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 363

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 80/237 (33%), Gaps = 11/237 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +    +  +     ++I+  +T  +++      +    + F
Sbjct: 7   IPFFIPHVGCPYVCTFCNQSRITGQSGISHLTPDYIKETIT--EYVGNKRNDKFWE-VAF 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I       +L   ++         I     P +V        +  GV  + LG
Sbjct: 64  YGGSFTAIHTGLQHQLLAPASEMLKRGIIDGIRCSTRPDAVGDKAITLLQSYGVKTVELG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+ +  L    R H A E + A+   +     +   L+  L  +T           + 
Sbjct: 124 VQSMNDGILVDAKRGHTAQEVLEAVVRLKQRGMTVGVQLLPGLKGETWESILETAIAVVK 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D + +Y + + + T     ++ G+    S   A+      +     H +     
Sbjct: 184 LQPDFVRIYPVLVIENTELADQYRAGEYEPLSTEQAITYCAFLKDWFERHNIEVIRT 240


>gi|189425003|ref|YP_001952180.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421262|gb|ACD95660.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 374

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 13/237 (5%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFF 76
            PF      C   C +C+ +        G +  + S     + ++Q  G  P   + + F
Sbjct: 6   IPFFIPHAGCPHTCLFCNQHMI-----SGAQQSVPSARQISETVQQWLGRSPNRAAEVAF 60

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ +L+  +    +L+ +           I I   P +++           V  I +G
Sbjct: 61  YGGSFTLLPRKQQEQLLEAVQPLLEQQKIRNIRISTRPDALDEAVLAFLAGHKVTTIEVG 120

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL++  L    R H A++++AAI   R+   ++   L+  LP  T  +    +Q  ++
Sbjct: 121 VQSLDDLVLLQSNRGHTAADSMAAIQRVRSAGFQVGAQLLPGLPGDTRAKALASVQGVIA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                + +Y   +  GT     ++ G    P     V        +    G+    I
Sbjct: 181 AGAQFVRIYPAVVLSGTALADQYRAGHYQPPDLAQGVKNCARMLHLCLQAGIPVIRI 237


>gi|239616598|ref|YP_002939920.1| Radical SAM domain protein [Kosmotoga olearia TBF 19.5.1]
 gi|239505429|gb|ACR78916.1| Radical SAM domain protein [Kosmotoga olearia TBF 19.5.1]
          Length = 349

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 3/218 (1%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + +++    C ++C +C+  S     ++  +        E+         R    + F
Sbjct: 2   NIIPIFLPHAGCKRRCVFCNEYSATGLGRIPTK---DEIFNEVDRYLAFFADRENVELAF 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GGT + +    +   LD   +         I    +P  +     +      ++ + +G
Sbjct: 59  YGGTFTGLPEWLMHDYLDLAMEIIKSGKAKAIRFSTSPEEITQRKVEILSDYPISLVEIG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            QS +E+ LR   R H   E   A  L +         L+  LP  +  +        + 
Sbjct: 119 AQSFDEEVLRLANRPHGVKEIYTACELLKEAKIPFGIHLMTGLPGDSEEKNIRSAVEVVK 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
                  ++   + K +    M+ +G         A++
Sbjct: 179 LKASTCRIHPTVVLKNSTLESMYHEGKYKPQDLGEALN 216


>gi|256544904|ref|ZP_05472275.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
 gi|256399403|gb|EEU13009.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
          Length = 358

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 97/247 (39%), Gaps = 12/247 (4%)

Query: 25  WPF--CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            PF  C   C +C+       +  + +EN I+     + +        ++  I F GG+ 
Sbjct: 12  IPFLGCPHDCAFCNQVKITNYKDNINKENTIRQINQYLSY---FPKNENLKEIAFFGGSF 68

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + ++ + +   L+             I +   P  +  +     +K  V+ I LG+QSL+
Sbjct: 69  TGLDEKVMISYLEIALNYKKKGIIDRIRLSTRPDYINNSILDILKKYEVDVIELGIQSLD 128

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            + L    R H+  ++I A  L ++   ++   ++  L K +  +       ++    D 
Sbjct: 129 NEILNANERGHSKEDSIRASKLIKDYGFKLGHQIMPGLYKDSFDKAIKTGLESIKMNPDM 188

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +Y   + K T   K++K+      S + A+++ +    I S   +    I      G 
Sbjct: 189 VRIYPTLVIKDTKLEKLYKERLYKPLSLDEAIEISSRLYMIYSYKKIPVIRI------GL 242

Query: 262 ESLHNLN 268
           +   N+N
Sbjct: 243 QPTENIN 249


>gi|332981631|ref|YP_004463072.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332699309|gb|AEE96250.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
          Length = 360

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 4/201 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++    C  +C YC+  +        +++ +      ++         +   + F G
Sbjct: 9   IPVFIPQQGCPFQCIYCNQYAITG----MRQDILSQADKILRQAILTAPSGTDIEVAFYG 64

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT + +       +L   A      +  +I +   P  +           GV  I LG Q
Sbjct: 65  GTFTAMPQDVQESLLKLAASYRQYINITDIRLSTRPDYINPPILDMLSHNGVTVIELGAQ 124

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+++  L   GR H++ +   A +L +    ++   L+  LP     +    + +A+   
Sbjct: 125 SMDDAVLHASGRGHSSKDVEDAAYLIKEYDIKLGIQLMVGLPSDDAGKDMRSVIKAIDIG 184

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D + +Y   + K T   +++
Sbjct: 185 ADFIRIYPTLVIKDTPLERLY 205


>gi|45360|emb|CAA40903.1| hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|151020|gb|AAA25710.1| ORF A; putative [Pseudomonas aeruginosa PAO1]
          Length = 160

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 5/121 (4%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
              L A  ++   +  + L +YVH PFC   C YC  N  + + +     ++   + E++
Sbjct: 38  FDQLHALRDS--RKAGHPLSLYVHIPFCANICYYCACNKVITKDRGRSAPYLARLVREIE 95

Query: 61  WM-RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            + R L+  + +  + FGGGTP+ + P  +  ++  +  +  +    + +  IE +P   
Sbjct: 96  IVSRHLSRAQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLDDDSGDYGIEIDPREA 155

Query: 118 E 118
           +
Sbjct: 156 D 156


>gi|157862716|gb|ABV90479.1| hypothetical protein [Sinorhizobium fredii]
          Length = 259

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 3/175 (1%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             Q      +S + FGGGTP++I+P++   ++D + +++     + + IE  P +     
Sbjct: 55  AAQAPQALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTIAVEIE--PRTFTAEM 112

Query: 122 FQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALP 180
            +    A V+ +SLGVQS +    +   R    ++  AAI   R I   R++FDL+Y LP
Sbjct: 113 AEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLP 172

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            QT+         A++   D L+++           +     +  LP      + 
Sbjct: 173 HQTVQSCVQSATAAVAMRRDRLAVFGYAHVPSYRKNQRIMIDETALPDIAARAEQ 227


>gi|120603583|ref|YP_967983.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120563812|gb|ABM29556.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
          Length = 340

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 85/215 (39%), Gaps = 2/215 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L V++ +  C ++C +C  ++   +      + ++     ++   +    R    I 
Sbjct: 13  HRILPVFLPFAGCPQRCVFCAQDAQTGQSVEPVADVLRRVDAILEERARH--NRPAVEIA 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GGT S +   +    L   A+       V +     P ++     +     G+N I L
Sbjct: 71  FYGGTFSALPEDDQHACLALAARWRERGMVVAVRCSTRPDALPPGKAEALAGLGMNLIEL 130

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+ ++ +L   GR  +  +A+ A    R+    +   L+  +P  T   +  +++   
Sbjct: 131 GVQTFDDTALAHAGRGCHGDDALTAARRVRDAGLGLGLQLLPGMPGVTPDIFRADMKVVA 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           S   D L LY   + +GT   ++ ++G       +
Sbjct: 191 SLRPDCLRLYPCLVLEGTGLARLWREGRYGPWDVD 225


>gi|269797767|ref|YP_003311667.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269094396|gb|ACZ24387.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 399

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 11/237 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +    +  +      +IQ     ++             + F
Sbjct: 7   IPFFIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQ---QTIKDYVGTKRNEKFWEVAF 63

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I       +L    +         I     P +V        +  GV  + LG
Sbjct: 64  YGGSFTAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTRPDAVGDEAITLLQSYGVKTVELG 123

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+ +  L    R H A E + A+   ++    +   L+  L  +T            +
Sbjct: 124 VQSMNDGILVDAKRGHTAQEVVEAVTRLKHRDMTVGVQLLPGLKGETWQTIIETAIAVAA 183

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D + +Y + + + T   + ++ G+    S  +A+   +  +     HG+     
Sbjct: 184 LRPDFVRIYPVLVIENTELAEQYRAGEYKPLSTELAIQYCSFLKDWFEQHGIEVIRT 240


>gi|46578810|ref|YP_009618.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448222|gb|AAS94877.1| radical SAM domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232673|gb|ADP85527.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 340

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 85/215 (39%), Gaps = 2/215 (0%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
              L V++ +  C ++C +C  ++   +      + ++     ++   +    R    I 
Sbjct: 13  HRILPVFLPFAGCPQRCVFCAQDAQTGQSVEPVADVLRRVDAILEERARH--NRPAVEIA 70

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F GGT S +   +    L   A+       V +     P ++     +     G+N I L
Sbjct: 71  FYGGTFSALPEDDQHACLALAARWRERGMVVAVRCSTRPDALPPGKAEALAGLGMNLIEL 130

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ+ ++ +L   GR  +  +A+ A    R+    +   L+  +P  T   +  +++   
Sbjct: 131 GVQTFDDTALAHAGRGCHGDDALTAARRVRDAGLGLGLQLLPGMPGVTPDIFRADMKVVA 190

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           S   D L LY   + +GT   ++ ++G       +
Sbjct: 191 SLRPDCLRLYPCLVLEGTGLARLWREGRYGPWDVD 225


>gi|227500107|ref|ZP_03930178.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus tetradius
           ATCC 35098]
 gi|227217822|gb|EEI83119.1| glucosamine 6-phosphate N-acetyltransferase [Anaerococcus tetradius
           ATCC 35098]
          Length = 359

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 94/247 (38%), Gaps = 13/247 (5%)

Query: 25  WPF--CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            PF  C   C +C+       + K+ +E  I      + +  Q       + + F GG+ 
Sbjct: 12  IPFLGCPHDCAFCNQLKITNFKDKLDREKIIAEIEKNLSYFPQA----KATELAFFGGSF 67

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + ++   +   L    +         I +   P  +  +  +  +   V+ I LG+QSL+
Sbjct: 68  TGLDEDVMKGYLSIAKEYKEKGIIDRIRLSTRPDYINNSILEILKAYQVDIIELGIQSLD 127

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L    R H+  +++ A  L ++    +   ++  L + T  +      ++ +   D 
Sbjct: 128 QEILDANERGHSVDDSLMASELIKSFGFSLGHQVMPGLFRDTKDKSIQTAIKSANMKPDM 187

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +Y   + K T   K+++ G       + AV L      I  A  +    I      G 
Sbjct: 188 VRIYPTLVIKDTKLEKLYQAGIYKPLDLDRAVSLSAEIYMIYRAKDIDVIRI------GL 241

Query: 262 ESLHNLN 268
           ++  N+N
Sbjct: 242 QTTENIN 248


>gi|317058971|ref|ZP_07923456.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684647|gb|EFS21482.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 336

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 80/195 (41%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           ++     ++   +    +S   + F GGT + +  +     L+ + +         I + 
Sbjct: 24  VEDIHRIVKEYLKTLPKKSEKEVAFFGGTFTGLSMELQKKYLEALQEYIERGDIQGIRLS 83

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P  ++ +  +  RK GV  I LG+QSL+E+ LR   R +   + +++I   ++    +
Sbjct: 84  TRPDYIQKDILEQLRKYGVKAIELGIQSLDEEVLRRSDRFYTEKQVLSSIQQMQSYGFEV 143

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              ++  LP  ++ +    ++  ++   D   +Y   + + T+  K +  G+    +   
Sbjct: 144 GIQIMVGLPGSSLEKEIKTIKTLIACQPDTARIYPTLVLEDTILEKQYHQGEYQALTLEE 203

Query: 232 AVDLYNLTQSITSAH 246
           AV+   +  +     
Sbjct: 204 AVERSRILYAYLEQA 218


>gi|150402748|ref|YP_001330042.1| ELP3 family histone acetyltransferase [Methanococcus maripaludis
           C7]
 gi|150033778|gb|ABR65891.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           C7]
          Length = 541

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 125/364 (34%), Gaps = 46/364 (12%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C      +F     S+  +            + ++Q+     Q  +      
Sbjct: 96  CPHGKCSFCPGGKESNFGDVPQSYTGKEPATMRGVMYNFDPYVQTSERLSQLEKVGHPTD 155

Query: 70  SISSIFFGGGTPS---------------LIEPQNIALILDGIAKNWTVSSNV-EITIEAN 113
            +  I  GG  P+                +  +    +     KN T       +T+E  
Sbjct: 156 KVELIIMGGTFPARDIEYQENFIKRCFDAMNGEVSETLEKAQEKNETAKHRCVALTLETR 215

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LG+QS  ++ L F+ R H    +I A  L ++   ++S+
Sbjct: 216 PDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLKDSGLKVSY 275

Query: 174 DLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            LI  LPK T    +  ++       +  D +  Y   +  GT  Y++ + G+ +  ++ 
Sbjct: 276 HLIPGLPKTTPKMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSGEFIPMTDE 335

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISN---HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            AV++    +SI            +I      + +   +L  L Y    +  GI      
Sbjct: 336 QAVEVITYGKSIMPKWVRTSRIQRDIPVTVIDAGVKKSNLGELVYNNLEEK-GISCKCIR 394

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
             +VG       I+   ES          +     FLS E   ++ L+  LRLR  I   
Sbjct: 395 CREVGHVTYKKGIKPDVESISLCREDYESSGGTDIFLSFEDTKNDLLIGYLRLR--IPSN 452

Query: 345 DWEM 348
            +  
Sbjct: 453 PFRK 456


>gi|294793531|ref|ZP_06758668.1| radical SAM domain protein [Veillonella sp. 3_1_44]
 gi|294455101|gb|EFG23473.1| radical SAM domain protein [Veillonella sp. 3_1_44]
          Length = 394

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 11/237 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +    +  +      +IQ     ++             + F
Sbjct: 2   IPFFIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQ---QTIKDYVGTKRNEKFWEVAF 58

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I       +L    +         I     P +V        +  GV  + LG
Sbjct: 59  YGGSFTAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTRPDAVGDEAITLLQSYGVKTVELG 118

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+ +  L    R H A E + A+   ++    +   L+  L  +T            +
Sbjct: 119 VQSMNDGILVDAKRGHTAQEVVEAVTRLKHRDMTVGVQLLPGLKGETWQTIIETAIAVAA 178

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D + +Y + + + T   + ++ G+    S  +A+   +  +     HG+     
Sbjct: 179 LRPDFVRIYPVLVIENTELAEQYRAGEYKPLSTELAIQYCSFLKDWFEQHGIEVIRT 235


>gi|77919005|ref|YP_356820.1| radical SAM protein histone acetyltransferase [Pelobacter
           carbinolicus DSM 2380]
 gi|77545088|gb|ABA88650.1| radical SAM protein, putative histone acetyltransferase [Pelobacter
           carbinolicus DSM 2380]
          Length = 345

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 81/232 (34%), Gaps = 6/232 (2%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           ++    C  +C +C+ +             +     ++  M  L G      + F GG+ 
Sbjct: 7   FIPHQGCKHRCVFCEQHRISGVVSAPAPAQVS---QQLDSMLPLCGD---GEVAFYGGSF 60

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           +L++       L  ++          + I   P +   +        GV  + LG QS  
Sbjct: 61  TLLDASLQLEYLRCVSPYIAAGRVSGVRISTRPDACGFDVVARLAALGVTTVELGCQSFS 120

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            + L    R H    A  A+ L R+   R+   L+  LP  ++ +    L  AL    D 
Sbjct: 121 ARVLEKAARGHGPQAARDAVGLLRDAGIRIGLQLMPGLPGGSLEEARYSLACALDLRPDF 180

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L +Y   +  GT    + + G+ +  +   AV+L           G+    I
Sbjct: 181 LRIYPTVVIAGTDLEILWRQGEYIPWTLEEAVELCAELMWHCHRVGMPVIRI 232


>gi|257452428|ref|ZP_05617727.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 330

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 80/195 (41%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           ++     ++   +    +S   + F GGT + +  +     L+ + +         I + 
Sbjct: 18  VEDIHRIVKEYLKTLPKKSEKEVAFFGGTFTGLSMELQKKYLEALQEYIERGDIQGIRLS 77

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P  ++ +  +  RK GV  I LG+QSL+E+ LR   R +   + +++I   ++    +
Sbjct: 78  TRPDYIQKDILEQLRKYGVKAIELGIQSLDEEVLRRSDRFYTEKQVLSSIQQMQSYGFEV 137

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              ++  LP  ++ +    ++  ++   D   +Y   + + T+  K +  G+    +   
Sbjct: 138 GIQIMVGLPGSSLEKEIKTIKTLIACQPDTARIYPTLVLEDTILEKQYHQGEYQALTLEE 197

Query: 232 AVDLYNLTQSITSAH 246
           AV+   +  +     
Sbjct: 198 AVERSRILYAYLEQA 212


>gi|303249424|ref|ZP_07335645.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489166|gb|EFL49137.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 364

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 2/203 (0%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  +             +      ++   +L   R    + F GG  + +   
Sbjct: 47  CPGRCLFCAQHLQSGHAPQPLSRVLAEMAAGLEEAGRL--GRGPYELAFYGGVFTALPDP 104

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                L+  A+         +     P +           AG++ + LG Q+ ++  LR 
Sbjct: 105 WPMRFLETAARFREAGLVTRVRCSTRPDACAPGLLARLAGAGLDMVELGAQTFDDAVLRA 164

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            GR H+A+    A          +   L+  LP  T  +   +   A + A + + L+  
Sbjct: 165 AGRGHDAASVRRAAVDVVRAGMGLGVQLLPGLPGHTPRELARDAVEAAALAPEVVRLHPC 224

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            +  GT    ++++G       +
Sbjct: 225 LVVDGTPLAGLYREGRYAPWDLD 247


>gi|289765132|ref|ZP_06524510.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716687|gb|EFD80699.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 280

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 111/293 (37%), Gaps = 26/293 (8%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T E    ++     +   + GVNRIS+G+Q+   +  + L R ++    +  +   +  
Sbjct: 1   MTFETTLHNLSFEKLKVMEENGVNRISVGIQTFSNRGRKLLNRTYDKDYVVERLKEIKKR 60

Query: 168 FPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD-LV 225
           F   +  D+IY    QT  +   +         D  S Y L I  G+   K  +    + 
Sbjct: 61  FSGLVCIDIIYNYANQTNEEVLQDANLLAEVGADSASFYSLIIHDGSDISKEREKDKSVY 120

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSR 285
           + +     +L+NL  S     G    E++  +       +  N     + + IG GA   
Sbjct: 121 IYNLERDEELHNLFYSRCIEKGYKLLELTKITNGRDSYKYIRNNNGLKNLLPIGVGAGGH 180

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
           ++      A ++ +    + K+   N +       LS        ++ GL   +   + +
Sbjct: 181 IQDIG---AYNMNQQMSFYSKITETNYN-------LS--------MISGLMQFDKFDLDE 222

Query: 346 WEMLAGRN---LDIECERNLQRQGFIE-RVQFSRLRCTQRGMTMLDSVIANLA 394
            +         +     +  +++G+I+    F+  +   +G+   +S++A++ 
Sbjct: 223 IKKYCNEESYKIVYRKLKEFEKEGYIKIENNFAIYQL--KGIFWGNSLVADII 273


>gi|303244754|ref|ZP_07331084.1| histone acetyltransferase, ELP3 family [Methanothermococcus
           okinawensis IH1]
 gi|302484888|gb|EFL47822.1| histone acetyltransferase, ELP3 family [Methanothermococcus
           okinawensis IH1]
          Length = 453

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 87/414 (21%), Positives = 149/414 (35%), Gaps = 67/414 (16%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  R            + + Q+     Q  +      
Sbjct: 7   CPHGKCLFCPGGTESTFGDVPQSYTGREPATMRGLMYKFDPYTQTKERIEQLEKVGHPTD 66

Query: 70  SISSIFFGGGTPSLIEPQNIALIL-DGIAKNWTVSSNVE---------------ITIEAN 113
            I  I  GG  P+         I     A N T+S  +E               +T+E  
Sbjct: 67  KIELIIMGGTFPARPTEYQDNFIKGCFDAMNGTISETLEEAQKINETAKHRCVALTVETR 126

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P   + N      K G  R+ LGVQ++    L ++ R H   ++I A  L ++   ++S+
Sbjct: 127 PDYCKENEINQMLKLGTTRVELGVQTIYNDILYYVKRGHTVEDSIKATQLLKDSGLKVSY 186

Query: 174 DLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            ++  LPK +    +    E+     +  D + +Y   + KGT  Y + K G+    ++ 
Sbjct: 187 HIMPGLPKSSKELDKKVFYEIFNNPDFKPDLIKIYPCLVIKGTELYDLWKKGEFKPITDE 246

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLN--YWRYGDYIGIGPGAHSR 285
            AV+L    +SI            +I            NL    ++  D  GI       
Sbjct: 247 EAVELITYAKSIMPKWVRTSRIQRDIPATVIEEGVKKSNLGELVYKNLDKKGIKCKCIRC 306

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVK 344
            +VG       I     +++K+ R++  A   KE FLS E   ++ L+  LRLR  I  K
Sbjct: 307 REVGHVMYKKGIVPDI-NYIKLCREDYIASGGKEIFLSYEDVKNDILIGYLRLR--IPYK 363

Query: 345 DWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQR------------GMTML 386
            +        +I+ +  L RQ  +   +    + T++            G  +L
Sbjct: 364 PFR------PEIDDKTALVRQLHVCGQEQ---KLTEKEDKENSWQHRGYGRLLL 408


>gi|182417259|ref|ZP_02948612.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237667395|ref|ZP_04527379.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182378905|gb|EDT76418.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237655743|gb|EEP53299.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 364

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 20/255 (7%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM------------------- 59
           + ++V    C   C +C+ +      K        +   ++                   
Sbjct: 8   IPIFVPHEGCPHDCVFCNQDKITGVKKDSLRIVKDTEKRDISSSNDENEEVTAESVRKTV 67

Query: 60  -QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
            +++  +    ++  I F GGT + I+ +    +L    +        +I +   P  + 
Sbjct: 68  YEYLETIDHSNAVVEISFFGGTFTGIKEEKQKELLQVAREFKDKGFIDKIRLSTRPDYIN 127

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
                  ++  V+ I LGVQSL E+ L   GR H+  +   A  L +     +   ++  
Sbjct: 128 QYILSYLKEYRVDIIELGVQSLNEEILLKAGRGHDVEDVSKASKLIKEYGFILGHQIMPG 187

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP           + ++    D   +Y     +GT    M+K GD V  +   AV++   
Sbjct: 188 LPGDDFKTDIETTKASIEMKPDICRIYPALTIRGTAMEIMYKRGDYVPYTLEEAVEISKE 247

Query: 239 TQSITSAHGLHAYEI 253
              +   + ++   I
Sbjct: 248 MYKMYRHNSVNVIRI 262


>gi|164688567|ref|ZP_02212595.1| hypothetical protein CLOBAR_02212 [Clostridium bartlettii DSM
           16795]
 gi|164602980|gb|EDQ96445.1| hypothetical protein CLOBAR_02212 [Clostridium bartlettii DSM
           16795]
          Length = 355

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 81/220 (36%), Gaps = 3/220 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               + ++V    C   C +C+         V  E   Q     ++   +     +   I
Sbjct: 2   KKRIIPIFVPHRGCPHDCIFCNQKKITG---VSTEVTAQDARNIIEECLETIDKDTNVEI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GG+ + IE +    +L    +        EI +   P  +  +  +  +K   + I 
Sbjct: 59  AFFGGSFTAIEEECQNELLAVAKEYVDKGLVHEIRMSTRPDCISDSILERLKKYDASIIE 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS++ + L    R H+    I +  L +    ++   ++  LP  T  +     ++ 
Sbjct: 119 LGVQSMDAKVLIDSVRGHDIESVIKSAKLIKEHDIKLGLQMMVGLPSDTEEKCIETARKF 178

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +S   D + +Y   + K T    + + G+    S    ++
Sbjct: 179 ISLNPDCVRIYPTLVVKDTGLEMLLERGEYTPFSLEQCIN 218


>gi|150399639|ref|YP_001323406.1| ELP3 family histone acetyltransferase [Methanococcus vannielii SB]
 gi|150012342|gb|ABR54794.1| histone acetyltransferase, ELP3 family [Methanococcus vannielii SB]
          Length = 541

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 75/363 (20%), Positives = 123/363 (33%), Gaps = 46/363 (12%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKVGQE-------NFIQSFLTEMQWMRQLTGPR 69
           C   KC +C      +F     S+  +              +IQ+     Q  +      
Sbjct: 96  CPHGKCSFCPGGKESNFGNVPQSYTGKEPATMRGIMYDFNPYIQTVERLKQLEKVGHPTD 155

Query: 70  SISSIFFGGGTPS---------------LIEPQNIALILDGIAKNWTVSSNV-EITIEAN 113
            +  I  GG  P+                +  +    + +   KN +       +TIE  
Sbjct: 156 KVELIIMGGTFPARDVGYQESFIKGCLDAMNGEISNSLNEAKLKNESAKHRCVALTIETR 215

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P              G  R+ LG+QS   + L F+ R H+   +I A  L ++   ++S+
Sbjct: 216 PDYCGEKEINQMLNLGATRVELGIQSTYGEVLDFVKRGHDIDASINATRLLKDSGLKVSY 275

Query: 174 DLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            +I  LP  T          +     Y  D +  Y   +  GT  Y + K G     ++ 
Sbjct: 276 HIIPGLPNTTFEMDKKMIETIFEDNRYKPDLIKFYPCLVIPGTEIYDLWKQGKFSPMNDE 335

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLNYWRYG--DYIGIGPGAHSR 285
            A++L    +SI            +I            NL    Y   + +GI       
Sbjct: 336 KAIELIVYGKSIMPKWIRTSRIQRDIPATVINEGVRKSNLGELVYNRLEELGIKCKCIRC 395

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVK 344
            +VG       I    E+ +K+ R +  A   KE FLS E   ++ L+  LRLR  I  K
Sbjct: 396 REVGHVGYKKGIFPEIEN-IKLYRTDYDANFGKEVFLSFEDLKNDLLIGYLRLR--IPSK 452

Query: 345 DWE 347
            + 
Sbjct: 453 PFR 455


>gi|303242103|ref|ZP_07328594.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
 gi|302590397|gb|EFL60154.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
          Length = 336

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 3/235 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++    C   C +C+   ++   K        S  + ++      G  +   I F G
Sbjct: 6   IPVFIPHKGCPFDCIFCNQ-KNISGQKEEVTE--SSMRSVIESHLDTIGNDAFVEIAFFG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + I  +     L+   +         I I   P  +        +   V+ I LGVQ
Sbjct: 63  GSFTGIAREEQIKFLEIANEYIDKGYVRSIRISTRPDYINEEILDYLKLYKVSTIELGVQ 122

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL+ + L    R H+  + I A    +     +    +  LP     +     ++ +  A
Sbjct: 123 SLDSEVLEKSTRGHSVDDVIKASKSIKENGFVLGIQTMIGLPGDDFEKAVKTAKKVVELA 182

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + +Y   + K T   K +K G     +   AV+L      +   + ++   +
Sbjct: 183 PQIVRIYPTLVIKETYLEKAYKIGQYAPLNLEDAVELCARLMDVYERNKINVIRV 237


>gi|312877235|ref|ZP_07737203.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795949|gb|EFR12310.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 218

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 75/199 (37%), Gaps = 7/199 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+  +        +E        +++   ++     +  + + GG  + I+  
Sbjct: 15  CPFNCIFCNQKTI---SGEKEEVSFDRIKRQIEQGLKINPDEDVE-LAYYGGNFTAIDID 70

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       + S   I I   P  ++    +  +   V  I LG+QS+ +  L  
Sbjct: 71  FQKKLLELANSFERIKS---IRISTRPDCIDEERLRLLKLYNVKTIELGIQSMFDDVLNA 127

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H A  +  A+ + +     +   ++  LPK T  +     +    ++ D   +Y  
Sbjct: 128 CARGHTAQHSKNAMEMIKKFGFLLGVQVMVGLPKSTPEKDIETAKILTGFSPDIARIYPT 187

Query: 208 TIEKGTLFYKMHKDGDLVL 226
            + +GT   KM++ G+   
Sbjct: 188 LVIEGTYLAKMYQKGEYEP 206


>gi|289423981|ref|ZP_06425773.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
 gi|289155617|gb|EFD04290.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
          Length = 380

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 3/201 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               + ++V    C   C +C+            +   +  +  ++ ++ +     +  I
Sbjct: 2   KKKIIPIFVPHQGCPHDCIFCNQKKITGLSTSMTDEDARDII--IESLKTIPDDAEVE-I 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GG+ + I+      +L        +    +I +   P  ++       ++ GV  I 
Sbjct: 59  AFFGGSFTAIDTDIQRKLLSVAKDFKDMGKVDDIRLSTRPDCIDDRELDLLKEYGVTIIE 118

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS+ E  L    R H+      +  + +    ++   ++  LP  +  +     +  
Sbjct: 119 LGVQSMNEDVLVKSIRGHHRDVVFTSAKMIKLAGFKLGLQMMLGLPGDSKDRCISTARDF 178

Query: 195 LSYAVDHLSLYQLTIEKGTLF 215
           +    D + +Y   + K T  
Sbjct: 179 VDIKPDFVRIYPTLVIKETGL 199


>gi|150021064|ref|YP_001306418.1| radical SAM domain-containing protein [Thermosipho melanesiensis
           BI429]
 gi|149793585|gb|ABR31033.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
          Length = 314

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 29/246 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-SIFFGGGTPSLIEP 86
           C  +C +C+  S        + + +           ++     I   I F GGT + +  
Sbjct: 12  CKNRCIFCNQYSMTGEKMPTKSDIL-----------KIIDKYPIKNEIAFYGGTFTGLSI 60

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +    IL+ +        N+ I I   P  +   N    +K  V  I +G+QS+ +  L 
Sbjct: 61  KKQIEILESVKFL-----NLPIRISTRPDEITEENLHILKKYNVKTIEIGIQSMFDDILS 115

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
              R H   + I AI L +     +S  L+  LPK T  +    L   ++  V+   ++ 
Sbjct: 116 ASNRGHTKKDNINAILLLQKFNFEISAHLMVGLPKDTKEKSLKTLNELINLNVNIFRIHP 175

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS-----FLGA 261
             + K T   K++ +      +             ITS   L  Y  +  +     F+  
Sbjct: 176 TLVFKNTKLEKLYLNNQYKPLTLEE-------AVDITSEMLLLIYANNAKAIRLGYFVPK 228

Query: 262 ESLHNL 267
           +SL N+
Sbjct: 229 QSLKNI 234


>gi|294671101|ref|ZP_06735956.1| hypothetical protein NEIELOOT_02809 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307209|gb|EFE48452.1| hypothetical protein NEIELOOT_02809 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 463

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 88/264 (33%), Gaps = 12/264 (4%)

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
             ++   Q    AGVNRIS+GVQ+ +    R LGR H+  EA A +     +   +  DL
Sbjct: 3   HFDMAKAQACIDAGVNRISIGVQTFDTAIRRRLGRKHSGEEAAAYLEKLGRLDAVVVADL 62

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP-SENVAVD 234
           I+ LP Q    W  +L+ A +  +  L  Y           +M + G    P   +    
Sbjct: 63  IFGLPGQDDEVWRNDLRIAAALPLSGLDTYAFNCYPFLPINRMIEKGAFPPPAGFDTQSL 122

Query: 235 LYNLTQSITSAHGLHAYEISNHSFL--GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHR 292
            Y  T    +  G      ++ ++   G  +L+N         +       S        
Sbjct: 123 QYAYTVEYLAQQGWRQISNNHFAYPERGERNLYNRLVKSNMACLAF----GSGAGGNGGG 178

Query: 293 VAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGR 352
            +  ++   +S+L       +         ++     +L+  L+        D  + AG+
Sbjct: 179 YSYQVQSDLDSYLATPAGQKNIAYMSRHSDNK-----YLLGRLQHDIETGTIDSRLFAGQ 233

Query: 353 NLDIECERNLQRQGFIERVQFSRL 376
                        G   +     L
Sbjct: 234 PRAQALLAQWAELGLTGKPDSDGL 257


>gi|194387316|dbj|BAG60022.1| unnamed protein product [Homo sapiens]
          Length = 195

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 1/131 (0%)

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEM 189
            R +L V SL++  LR LGR H+A +A+  +  AR +FP R+S DL+  LP Q +  W  
Sbjct: 38  RRAALYVHSLDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDLMLGLPAQQVGPWLG 97

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +LQ  L +  DHLSLYQL++E+GT  +   + G L  P   +A ++Y   +++    G H
Sbjct: 98  QLQELLHHCDDHLSLYQLSLERGTALFAQVQRGALPAPDPELAAEMYQRGRAVLREAGFH 157

Query: 250 AYEISNHSFLG 260
            YE+SN +  G
Sbjct: 158 QYEVSNFARNG 168


>gi|167630238|ref|YP_001680737.1| radical sam domain protein, putative [Heliobacterium modesticaldum
           Ice1]
 gi|167592978|gb|ABZ84726.1| radical sam domain protein, putative [Heliobacterium modesticaldum
           Ice1]
          Length = 389

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 12/214 (5%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM------------QWMRQLT 66
           + +++    C  +C YC          +     +   +                      
Sbjct: 3   IPIFIPQLGCPGRCLYCSQEGLTGEAGLPGPERVDEIVRRYLGSWKRARLAGPAAFAGAV 62

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
               +  I F GG+ +++       +L    +         + +   P  ++    +  R
Sbjct: 63  AKGEVHEIAFFGGSFTMLPGDVQESLLAAAKRWLGREGIGGVRLSTRPDGIDKATVERLR 122

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             GV  + +G QS+    L   GR H  ++ + A+ L R    ++   L+  LP      
Sbjct: 123 HYGVTVVEVGAQSMHAWVLERSGRGHGPADTVRALDLLRRGGLQVGIHLMTGLPGDDEAG 182

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
               LQ  L    D L ++   + K +   ++ +
Sbjct: 183 ALSSLQECLWLKPDFLRIHPTLVLKESPLERLWR 216


>gi|222055247|ref|YP_002537609.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221564536|gb|ACM20508.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 358

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 81/222 (36%), Gaps = 10/222 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            PF      C  +C +C  N        GQ       LT++   R+  G R +   +FGG
Sbjct: 5   VPFFISHLGCPHQCVFC--NQMEIAGTKGQMPGQTEILTKVAAYRRSGGCRPVQVAYFGG 62

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
            T + +   +   +L  +           I I   P  V+V   Q  R  GV  + LG+Q
Sbjct: 63  -TFTALPRADQERLLQPLQPLLVSGEVESIRISTRPDCVDVETAQFLRGMGVRVVELGIQ 121

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+ ++ L   GR H A+    A  + R         L+  LP  +  +    L+R ++  
Sbjct: 122 SMADEVLEMSGRGHAAAHVERAASVLRQAGLLWGAQLMPGLPGDSPAKAMASLERVIALE 181

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              L +Y   + K T    + + G L  P          +  
Sbjct: 182 PSCLRIYPTLVIKDTPLASLFEQG-LYEPLTMETGICLCMAM 222


>gi|310658888|ref|YP_003936609.1| radical sam-superfamily protein [Clostridium sticklandii DSM 519]
 gi|308825666|emb|CBH21704.1| Radical SAM-superfamily protein [Clostridium sticklandii]
          Length = 352

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 91/240 (37%), Gaps = 4/240 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               + +++    C   C +C+    +       +   +   ++++   +   P ++  I
Sbjct: 2   KKKIIPIFIPHQGCPNDCVFCNQ-KRITGKGASID--FEEIKSDIEDSLKTIKPDTLIEI 58

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRI 133
            F GG+ + I  +     L+      ++ +   +I I   P ++     +  +   V+ I
Sbjct: 59  AFFGGSFTAINTELQRRCLEIANYYKSMDARICDIRISTRPDAISKEKLEFLKMYNVSII 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQSL+EQ L    R H++    ++    +     +   ++  LPK +  +     + 
Sbjct: 119 ELGVQSLDEQVLISSERGHDSLCVYSSSSQIQQYGFTLGLQMMVGLPKDSEEKVIYTARE 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +    D++ +Y + + K T   +    G     S   ++++      +   + +    I
Sbjct: 179 FIKIKPDYVRIYPVLVIKDTKLEEQMLQGAYSPISVEESIEIVKKIYLLFVQNKIKVIRI 238


>gi|257066164|ref|YP_003152420.1| Radical SAM domain-containing protein [Anaerococcus prevotii DSM
           20548]
 gi|256798044|gb|ACV28699.1| Radical SAM domain protein [Anaerococcus prevotii DSM 20548]
          Length = 359

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 87/247 (35%), Gaps = 13/247 (5%)

Query: 25  WPF--CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            PF  C   C +C+       + K+ ++  I+     + +       +    + F GG+ 
Sbjct: 12  IPFLGCPHDCAFCNQVKITNFKDKLDKDKLIEEIEKNLSY----FPEKRADELAFFGGSF 67

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + ++   +   LD             I +   P  +  +     ++  V+ I LG+QSL+
Sbjct: 68  TGLDEDVMIAYLDVAKSYKDKGIIDRIRLSTRPDYINNSILDILKEKSVDVIELGIQSLD 127

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L +  R H   ++  A  L +     +   ++  L      +       + +   D 
Sbjct: 128 QKVLDYNERGHKIEDSYKASELIKEYGFSLGHQIMPGLFMDEYKKSIKTAIDSANIGPDM 187

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +Y   + K T    ++          + AV+L      I  A  +    I      G 
Sbjct: 188 VRIYPTLVIKDTKLEALYNLEVYKPLDLDEAVELSAELYIIYRAKYIDVIRI------GL 241

Query: 262 ESLHNLN 268
           ++  N+N
Sbjct: 242 QTTENIN 248


>gi|160947506|ref|ZP_02094673.1| hypothetical protein PEPMIC_01440 [Parvimonas micra ATCC 33270]
 gi|158446640|gb|EDP23635.1| hypothetical protein PEPMIC_01440 [Parvimonas micra ATCC 33270]
          Length = 346

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 79/241 (32%), Gaps = 10/241 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS-SIFFGGGTPSLIEP 86
           C   C +C+         V  E  I+     ++        ++I   I F GG+ + ++ 
Sbjct: 3   CPHDCIFCNQRKITNFVDVLDEVDIR---RNIEQYISYFKNKTIPIEIAFYGGSFTGLDK 59

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +   LD   +         I +   P  +        +K  V  I LGVQS+ + +L 
Sbjct: 60  NLMISYLDIAKEYIDKGFVSSIRLSTRPDYINHEILDILKKYEVKTIELGVQSITKSTLD 119

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
              R H+      +  L +    ++   ++  L   T                D + +Y 
Sbjct: 120 LNNRGHDVECIYKSSTLIKKYDIKLGLQMMVGLYGDTFDMVINTAFELCKIDPDFVRIYP 179

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHN 266
             I + T   +++     +  S   ++ L               Y+I     LG +S  N
Sbjct: 180 TLIIRDTELERLYYFKKYIPMSLEDSIYLCKYI-----YIIFKYYDIP-IIRLGLQSSDN 233

Query: 267 L 267
           +
Sbjct: 234 I 234


>gi|317151834|ref|YP_004119882.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942085|gb|ADU61136.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 347

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 9/213 (4%)

Query: 26  PF--CVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           PF  C  +C +C  +         R +   +    +   +++    L   R+   + F G
Sbjct: 25  PFAGCPHRCLFCAQDKQTGHAPASRDQADLQAVFDTLAQDLE--SALDAGRAPCELAFYG 82

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GT S +        L   A+         +     P  V        R  G++ + LG+Q
Sbjct: 83  GTFSALPAPWPETFLALAARYRERGLITRVRCSTRPDCVAPETLAALRALGLDMVELGIQ 142

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S ++++L   GR +    A+      R     +   L+  LP      ++ +   A   A
Sbjct: 143 SFDDRALAASGRGYTGKTALRGCESVREAGLALGIQLLPGLPGDHPGLFQHDAALAADLA 202

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            +   LY   + + T    + + G     S + 
Sbjct: 203 PEIARLYPCLVVRSTPLATLWERGQYTPWSLDQ 235


>gi|291278589|ref|YP_003495424.1| hypothetical protein DEFDS_0156 [Deferribacter desulfuricans SSM1]
 gi|290753291|dbj|BAI79668.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 336

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 17/209 (8%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           G + L V++ +  C KKC YC  NS        +K   E+ +  FL            + 
Sbjct: 4   GKDILPVFIPFAGCPKKCIYCQQNSITGVKLHDFKKDVEDQVNLFLRV---------KKK 54

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GG+ +L+       +         +     + +   PS  +       +   V
Sbjct: 55  WGKIAFYGGSFNLLPKDKREFLYKVANSINILK----VRVSCYPSGFDTELINEMKDNNV 110

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LGVQS  E+ LR  GR+++++E +  + L +     +   ++  +  +        
Sbjct: 111 EDVELGVQSFSEKVLRLNGRDYSSNEVVKILKLLKQNNFNVGIQIMVGMFGEEYGDIIQN 170

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +        +++ +Y   I K T    + 
Sbjct: 171 IDFIDKLKFEYIRIYPAVIFKDTKLAALI 199


>gi|300814494|ref|ZP_07094755.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511412|gb|EFK38651.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 351

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 129/367 (35%), Gaps = 49/367 (13%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + ++V    C   C +C+             + ++     +         +    + F
Sbjct: 5   NIIPIFVPHLGCPLDCCFCNQKKITGVSTDISSDIVE---KTILEYLSYFKRKDNVEVAF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I+    + +L    K         I +   P  ++ +     +K GV+ I LG
Sbjct: 62  YGGSFTAIDKNIQSELLSVAFKYKKKGLVNNIRLSTRPDCIDTDTLDNLKKFGVDIIELG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL++  L    R H++     +  L ++   ++    +  LP  + ++     +  + 
Sbjct: 122 VQSLDDGVLILSNRGHDSKCVQKSSELIKDYGFKLGLQQMIGLPGDSFSKSYYTAKEFVK 181

Query: 197 YAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                + +Y   + K T     +++     L   +    + ++       +        N
Sbjct: 182 LNPHCVRIYPTLVVKDTALENDLYEGTYDALSLSDSISIVSDILNLYYKNNI-------N 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
              +G +   N+NY   GD +  GP                   HP ++ ++V  N    
Sbjct: 235 VIRVGLQPTENINY--NGDVVA-GP------------------FHP-AYRQLVEGNYLYN 272

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQFS 374
             K +L +  +  + L+                  GRN+  I  +++  ++  IE ++ +
Sbjct: 273 CLKNYLLANDEKKDILIYA---------------NGRNISNIAGQKSKNKKKLIENLKLN 317

Query: 375 RLRCTQR 381
           +L   ++
Sbjct: 318 KLVLREK 324


>gi|282882370|ref|ZP_06290998.1| radical SAM domain protein [Peptoniphilus lacrimalis 315-B]
 gi|281297791|gb|EFA90259.1| radical SAM domain protein [Peptoniphilus lacrimalis 315-B]
          Length = 351

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 128/367 (34%), Gaps = 49/367 (13%)

Query: 17  NSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           N + ++V    C   C +C+             + ++     +         +    + F
Sbjct: 5   NIIPIFVPHLGCPLDCCFCNQKKITGVSTDISSDIVE---KTILEYLSYFKRKDNVEVAF 61

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + I+    + +L    K         I +   P  ++ +     +K GV+ I LG
Sbjct: 62  YGGSFTAIDKNIQSELLSVAFKYKNKGLVNNIRLSTRPDCIDTDTLDNLKKFGVDIIELG 121

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL++  L    R H++     +  L ++   ++    +  LP  + ++     +  + 
Sbjct: 122 VQSLDDGVLILSNRGHDSKCVQKSSKLIKDYGFKLGLQQMIGLPGDSFSKSYYTAKEFVK 181

Query: 197 YAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                + +Y   + K T     +++     L   +    + ++       +        N
Sbjct: 182 LKPHCVRIYPTLVVKDTALENDLYEGTYDALSLSDSISIVSDILNLYYKNNI-------N 234

Query: 256 HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAV 315
              +G +   N+NY   GD +  GP                   HP ++ ++V  N    
Sbjct: 235 VIRVGLQPTENINY--NGDVVA-GP------------------FHP-AYRQLVEGNYLYN 272

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD-IECERNLQRQGFIERVQFS 374
             K +L +  +  + L+                  GRN+  I  +++  ++  IE +  +
Sbjct: 273 CLKNYLLANDEKKDILIYA---------------NGRNISNIAGQKSKNKKKLIENLNLN 317

Query: 375 RLRCTQR 381
           +L   ++
Sbjct: 318 KLVLREK 324


>gi|297619665|ref|YP_003707770.1| histone acetyltransferase, ELP3 family [Methanococcus voltae A3]
 gi|297378642|gb|ADI36797.1| histone acetyltransferase, ELP3 family [Methanococcus voltae A3]
          Length = 553

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 73/353 (20%), Positives = 131/353 (37%), Gaps = 42/353 (11%)

Query: 28  CVK-KCPYCD------FN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C       F     S+  +            + ++Q+     Q         
Sbjct: 106 CPHGKCAFCPGGKESVFGDVPQSYTGKEPATMRGIMYNFDPYVQTSERLKQLENVGHPTD 165

Query: 70  SISSIFFGGGTPS------------LIEPQN--IALILDGIAKNWTVSSN--VEITIEAN 113
            +  I  GG  P+             ++  N  I+  L+   K    +S+  V +TIE  
Sbjct: 166 KVELIIMGGTFPARDTSYQENFIKGCLDAMNGVISETLEEAQKINETASHRCVALTIETR 225

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P   +  +     K G  R+ LG+QS  ++ L F+ R H+ SE+I A    +N   ++S+
Sbjct: 226 PDYCKEEHVNEMLKLGATRVELGIQSTYDEILDFVKRGHSVSESIKATSRLKNSGLKVSY 285

Query: 174 DLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            +I  LP  T    +  ++R      +  D +  Y   + +GT  Y + K G+    ++ 
Sbjct: 286 HIIPGLPHTTEEMDKENIRRVFNNPEFKPDLIKFYPCLVIEGTELYDLWKKGEYKPITDE 345

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLNYWRYGDYI--GIGPGAHSR 285
            AV+L    +SI            +I            NL    Y +    GI       
Sbjct: 346 EAVELITYGKSIMPKWIRTSRIQRDIPATVIDEGVKKSNLGELVYNNLEKKGIKCKCIRC 405

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLR 338
            +VG       I+    S   ++ +   +  ++ F++ E   ++ L+  LRLR
Sbjct: 406 REVGHVCYKKGIKPDNSSIKLLIEEYEASGGKEFFITYEDIKNDLLIGYLRLR 458


>gi|325478675|gb|EGC81786.1| radical SAM domain protein [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 359

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 13/247 (5%)

Query: 25  WPF--CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            PF  C   C +C+       + K+ +E  I      + +       R  + I F GG+ 
Sbjct: 12  IPFLGCPHDCAFCNQVKITNYKDKLDEEKIINEINKNLSYY----PDRKATEIAFFGGSF 67

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + ++   +   L+             I +   P  +  +     +   V+ I LG+QSL+
Sbjct: 68  TGLDQDTMIGYLEITLAYKEKGIIDRIRLSTRPDYINNSILDILQDYKVDIIELGIQSLD 127

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +  L    R H+  E+  A  L +     +   ++  L K T  +      ++ +   D 
Sbjct: 128 QNILDANERGHSIEESFYASKLIKQRGFTLGHQIMPGLYKDTREKSIETAIKSANIGPDI 187

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +Y   + K T    ++ +G     S + AV L      I  A  +    I      G 
Sbjct: 188 VRIYPTLVIKDTKLEILYNNGFYQPLSLDKAVSLSANLYMIYRAKDIKVIRI------GL 241

Query: 262 ESLHNLN 268
           +   N+N
Sbjct: 242 QPTENIN 248


>gi|121730187|ref|ZP_01682578.1| coproporphyrinogen III oxidase [Vibrio cholerae V52]
 gi|121628062|gb|EAX60606.1| coproporphyrinogen III oxidase [Vibrio cholerae V52]
          Length = 173

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 21  VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGG 78
           +Y+H PFC  +C +C+F  +    ++  + +  + L E++    L   ++    +++ GG
Sbjct: 63  LYIHVPFCRVRCTFCNFFQNAASRQL-VDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 121

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           GTP+ + P+ I  +   I +++ ++ + EIT+E          F+   + G 
Sbjct: 122 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGF 173


>gi|261403497|ref|YP_003247721.1| hypothetical protein Metvu_1386 [Methanocaldococcus vulcanius M7]
 gi|261370490|gb|ACX73239.1| conserved hypothetical protein [Methanocaldococcus vulcanius M7]
          Length = 340

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 31/265 (11%)

Query: 28  CVKK----CPYCDFNSHVRRYKVGQENFIQ---SFLTEMQWMRQLTGPRSIS--SIFFGG 78
           C  K    C +C         +     +     S   +++   ++   + I    ++F  
Sbjct: 62  CPNKTTGGCIFC-----PDMGRPISVRYCDVQLSLKDQIEKQIEIQKNKGIKKFYVYFYP 116

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNR-IS 134
           GT +    + +  I D       V   + ++I   P  +E        +    G +  I 
Sbjct: 117 GTNTYAPIEKLKEIWDFSLSYKEV---IGLSIGTRPDCLEEEKLDILGEYVKKGYDIWID 173

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQ++ +++L+ L R HN S+ I AI        ++   +I  LP +T        +  
Sbjct: 174 LGVQTMHQKTLKILNRGHNVSDTITAIQNCHEKGIKVCGHIILGLPNETWDDMMETAKIL 233

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA---- 250
            S  +D + +Y L + KGT   +M+  G+     E   + L        S H L      
Sbjct: 234 SSLKIDAVKIYPLVVIKGTKLEEMYWRGEYRTFDEKQYISLVCDFLEHLSPHVLIQRLSK 293

Query: 251 ------YEISNHSFLGAESLHNLNY 269
                  +IS   +LG   + N  Y
Sbjct: 294 DKVPEEIKISPEWYLGRLRIMNKVY 318


>gi|134046858|ref|YP_001098343.1| ELP3 family histone acetyltransferase [Methanococcus maripaludis
           C5]
 gi|132664483|gb|ABO36129.1| histone acetyltransferase, ELP3 family [Methanococcus maripaludis
           C5]
          Length = 541

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 125/364 (34%), Gaps = 46/364 (12%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C      +F     S+  +            + ++Q+     Q  +      
Sbjct: 96  CPHGKCSFCPGGKESNFGDVPQSYTGKEPATMRGVMYNFDPYVQTSERLSQLEKVGHPTD 155

Query: 70  SISSIFFGGGTPS---------------LIEPQNIALILDGIAKNWTVSSNV-EITIEAN 113
            +  I  GG  P+                +  +    +     KN T       +T+E  
Sbjct: 156 KVELIIMGGTFPARDIEYQENFIKRCLDAMNGEVSETLEKAQEKNETAKHRCVALTLETR 215

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  R+ LG+QS  ++ L F+ R H    +I A  L ++   ++S+
Sbjct: 216 PDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLKDSGLKVSY 275

Query: 174 DLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            LI  LPK T    +  ++       +  D +  Y   +  GT  Y++ + G+    ++ 
Sbjct: 276 HLIPGLPKTTPELDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSGEFDPMTDE 335

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISN---HSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            AVD+    +SI            +I      + +   +L  L Y    +   I      
Sbjct: 336 KAVDVITYGKSIMPKWVRTSRIQRDIPVTVIDAGVKKSNLGELVYNNLEEKE-IKCKCIR 394

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
             +VG       I+   ES          +  ++ FLS E   ++ L+  LRLR  I   
Sbjct: 395 CREVGHVTYKKGIKPDLESITLCREDYESSGGKEIFLSFEDTKNDLLIGYLRLR--IPNN 452

Query: 345 DWEM 348
            +  
Sbjct: 453 PFRK 456


>gi|297588526|ref|ZP_06947169.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 53516]
 gi|297573899|gb|EFH92620.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 1/197 (0%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C   C +C+        +V +++ I++ +   Q        +    I F G
Sbjct: 8   VSLFIPHLGCPNDCIFCNQRKITNYIEVVKKDEIRNEIRN-QLANFPNKSQEDIQIAFYG 66

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + IE   +   L    +         I +   P  ++ +     ++  V  I LGVQ
Sbjct: 67  GSFTGIEETAMIDYLKIANEFIEDDKVRSIRLSTRPDYIDEHILNILKEFNVETIELGVQ 126

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S+ +  L    R H++     +  L +++   +   ++  L K T           +   
Sbjct: 127 SMVDSVLDANLRCHDSQCVRTSSELIKSMGFSLGLQMMTGLYKSTPEMDLYTADELIKLQ 186

Query: 199 VDHLSLYQLTIEKGTLF 215
            D + +Y   + K T+ 
Sbjct: 187 PDFVRIYPTLVIKNTML 203


>gi|154249472|ref|YP_001410297.1| radical SAM domain-containing protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153408|gb|ABS60640.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 317

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 19/207 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  N ++   +             ++++  +    +I  I F GGT + +  +
Sbjct: 21  CRTRCVFC--NQYIMTGEK---------TPNLKFVENINIDETIDEIAFYGGTFTGLPKE 69

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  +L        +  ++   I   P  V        ++  V  I LG++SL+++ L  
Sbjct: 70  TIIKLLS-------IKPDIPKRISTRPDCVNDEIIGLLKQMNVKVIELGIESLDDEVLNV 122

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R +N+ +AI A+ L  N F  +   L+  LP+    +    ++  L+  V    ++  
Sbjct: 123 SKRGYNSEDAINAVKLINNQFLLI-AHLMVGLPQDNKEKDLDTIKNLLNIGVKIFRIHPT 181

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVD 234
            + K T   +M   G+    S   AVD
Sbjct: 182 IVFKNTELERMFLSGEYEPISLEDAVD 208


>gi|157362927|ref|YP_001469694.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
 gi|157313531|gb|ABV32630.1| Radical SAM domain protein [Thermotoga lettingae TMO]
          Length = 343

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 81/228 (35%), Gaps = 10/228 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K+C +CD  S     ++     +       + + +   P     I F GGT + +   
Sbjct: 13  CKKRCLFCDQRSATGFSQLPSIEELN------KMINKYIAPDERFEIAFYGGTFTALPVL 66

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                L    +    +    I I   P  +   N    +K GV  + LG QS  +  L  
Sbjct: 67  LQKRYLAWADEYIRKNVCDGIRISTRPDEINKENLIFLKKNGVKFVELGAQSFCDDVLHE 126

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ--RALSYAVDHLSLY 205
             RNH++ +   A  L + +       L+  LP     +W+      + +        L+
Sbjct: 127 SERNHSSKDIEKACTLLKELKIDFGLHLMIGLPGD--EKWKDLFSSWKTVENGAKTCRLH 184

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + KG     ++ DG       + A+D+ +   +I  ++ +    I
Sbjct: 185 PTIVLKGAPLESLYLDGRYRAVRLDEAIDICSDMMAILESNNVKVIRI 232


>gi|312961555|ref|ZP_07776056.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens WH6]
 gi|311284234|gb|EFQ62814.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens WH6]
          Length = 421

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/406 (15%), Positives = 130/406 (32%), Gaps = 54/406 (13%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-S 70
           + Q    L + +HWP                      + + +S   E+Q +    G R  
Sbjct: 44  SRQCQRPLALTLHWP-----------------ASPPSDMYRRSLAQEIQLVGCHLGRRQP 86

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKA 128
           +  + + G  P       +  ++  + + +        +  I+ +P   +       R+ 
Sbjct: 87  LDYLQWRGAAP----IDAVQALMTALRERFNFLEHGRGDYGIDLDPRHTDWAAVGLLREL 142

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           G NR+ +GV     +  +   R  N +   + I  AR   F  +S DL Y    QT+  +
Sbjct: 143 GFNRVCIGVPDARAEDAQADFR--NPAPIQSLIDAARTFDFRSVSVDLGYGSAWQTLASF 200

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E++L   ++   D L ++           +        L +E     +  +      A G
Sbjct: 201 ELKLASLIALEPDRLHVFDYAQPPSRYLAQ----PLQTLGAEADKTAMRQMAFEHLDAAG 256

Query: 248 LHAYEISNHSFLG-----AESLHNLNYW-------RYGDYIGIGPGAHSRVKVGSHRVAI 295
            H   +   +        A+    L+          Y D+IG+G GA S++     +   
Sbjct: 257 YHYIGLGQFARGDDDLTQAQERGRLSRTCEGFSLHGYCDHIGLGLGAFSQIDTLCAQNTS 316

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
           +       + + +     A  +     +     + ++  L     + ++  E   G    
Sbjct: 317 A----ERPYAQALNNGQLATCQGWQRETGDALRDHVVERLACDLELDIQAIERRYGLIFS 372

Query: 356 IE------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
                         R+G IE +    L     G   +D + A  A 
Sbjct: 373 RYFAAIWPVLEQWDREGLIE-LSAQFLCVLPAGRRQVDELCAVFAA 417


>gi|89514554|gb|ABD75155.1| putative coproporphyrinogen III oxidase [Sinorhizobium saheli]
          Length = 153

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 8   ENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
              +  Q ++S+ +Y H PFC + C +C F   +       E ++ +   EM W      
Sbjct: 19  AEQLLTQIASSVDLYFHVPFCSQYCTFCHFAKEINPSPERVERYLAALQKEMSWSDAALN 78

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV----NNFQ 123
            R+I + FFGGGTPS +    +  + D     + +S + E+++E +PS  +     +   
Sbjct: 79  GRAIETAFFGGGTPSFLTNHQLKTLFDMTNTRFDLSKS-EVSVELHPSLAKQADAVDRVS 137

Query: 124 GYRKAGVNRISLGVQS 139
              + GVNR  LGVQ+
Sbjct: 138 TLLRGGVNRFVLGVQT 153


>gi|212704732|ref|ZP_03312860.1| hypothetical protein DESPIG_02795 [Desulfovibrio piger ATCC 29098]
 gi|212671859|gb|EEB32342.1| hypothetical protein DESPIG_02795 [Desulfovibrio piger ATCC 29098]
          Length = 325

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 1/170 (0%)

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
               +    R    + F GGT + + P+++   LD                   P  ++ 
Sbjct: 11  DLRARRAQGRPPVELAFYGGTFTALAPRDLDACLDMADSLLRDGCITRFRCSTRPDRLDA 70

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                 R+ G   + LG+QS  + +L+   R+++  +A  A  L R+    +   L+  +
Sbjct: 71  ALLARLRRHGCRTVELGIQSFSDTALQASERHYSGRQAAEACRLVRDAGLALGVQLLPGM 130

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           P      +  +++RALS   D L  Y   +  GT   +      L  P  
Sbjct: 131 PGHQPEDFLADVRRALSLGADMLRFYPCLVLAGTELARR-WQQGLYTPWP 179


>gi|210622529|ref|ZP_03293222.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275]
 gi|210154164|gb|EEA85170.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275]
          Length = 358

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 3/208 (1%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           M       + ++V    C   C +C+               ++     ++         +
Sbjct: 1   MKNMKKRIIPIFVPHQGCPNDCIFCNQKKITGVCTTVTPEIVR---DIIEECLPTIDKDA 57

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GG+ + I+      +L    +        +I +   P  +     +  +  G 
Sbjct: 58  EVEIAFFGGSFTAIDMDIQRSLLAVAKEYKDRGIVKDIRMSTRPDCITDEILEMVKSYGT 117

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I LGVQSL+E+ L    R HN++    +  + +     +   ++  LP  +  +    
Sbjct: 118 TIIELGVQSLDERVLLDSIRGHNSNVVYKSAEMIKKHGINLGLQMMVGLPSDSEEKCLFT 177

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            +  +      + +Y   + K T   + 
Sbjct: 178 AREFIKMDPFCVRIYPTLVIKETGLERR 205


>gi|307297607|ref|ZP_07577413.1| Radical SAM domain protein [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916867|gb|EFN47249.1| Radical SAM domain protein [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 371

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 10/240 (4%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           S Y  +M     N + ++V    C  +C +C+  S      V  E  I   ++ ++    
Sbjct: 29  SVYNTSM-----NIIPIFVPHEGCRTRCIFCNEYSATGVTGVPDEKEI---VSTVEKYLS 80

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                    + F GGT +    Q     L+   + +       I    +P  +     + 
Sbjct: 81  FFRHPEDVELAFYGGTFTGFGNQQ--KYLEVATEFFKAGQIKGIRFSTSPGLISERLVEY 138

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            +   VN I LGVQS ++  L    R+HN S+   A HL  +   +    L+  LP+ + 
Sbjct: 139 LKPYPVNFIELGVQSFDDTVLEKSNRDHNTSDVYKATHLLNSNGIKFGIHLMTGLPEDSE 198

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           ++     + A+      + L+ L I KG+L    +K           ++++      + S
Sbjct: 199 SKDIHSTREAIRVGASSVRLHPLVILKGSLLENEYKLRRFSPLDLQESIEILWKMYLLLS 258


>gi|218512256|ref|ZP_03509096.1| coproporphyrinogen III oxidase [Rhizobium etli 8C-3]
          Length = 131

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 2/130 (1%)

Query: 57  TEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
            E++ +         + ++ FGGGTP+++ PQ    ++  +   +   ++  + +E +P 
Sbjct: 1   QEIELVSFAAGNDVPVKNVHFGGGTPTIMRPQEFTALMAKLRSAFAFEADAGVAVEIDPR 60

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFD 174
           ++     +   + GV+R  LGVQS +      + R  +  +   A + L  +    +++D
Sbjct: 61  TLAAPMIEALAENGVDRARLGVQSFDPVVQAAINRLQSFEQTETAVVGLRSSGVSSINYD 120

Query: 175 LIYALPKQTM 184
           LIY LPKQT+
Sbjct: 121 LIYGLPKQTV 130


>gi|149423624|ref|XP_001516694.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 122

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSY 197
           SL++  LR LGR H A+EA+  +  AR +FP R S DL++ LP+Q++  W  +L   L  
Sbjct: 1   SLDDAELRLLGRTHTAAEALQTLEEARRLFPGRTSLDLMFGLPEQSVAAWRRQLTHLLQC 60

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             DHLSLYQL++E+GT  ++  + G L  P+  V+ ++Y   +          YE+SN +
Sbjct: 61  CDDHLSLYQLSLERGTALFRRVQRGALPAPAPEVSAEMYRAGREALREANFRQYEVSNFA 120

Query: 258 F 258
            
Sbjct: 121 R 121


>gi|317050894|ref|YP_004112010.1| Radical SAM domain-containing protein [Desulfurispirillum indicum
           S5]
 gi|316945978|gb|ADU65454.1| Radical SAM domain protein [Desulfurispirillum indicum S5]
          Length = 330

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 79/232 (34%), Gaps = 8/232 (3%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + V++    C   C +CD ++            +++       ++        + + F G
Sbjct: 3   IPVFLPMQGCSSSCVFCDQHAITAT-PAPSPIDVETL------VKSRNPDGQPAQLAFYG 55

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + +    +   +D   +  +            P ++        ++ G   I LGVQ
Sbjct: 56  GSFTALPRMRLKEYVDTARRLRSEGLITGFRCSTRPDAIHHEVLDILQQGGCEAIELGVQ 115

Query: 139 SLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S + +  +  GR      +    +        +    L+  LP +    +   +   ++ 
Sbjct: 116 STDIRVQQQSGRIPTDMDQLHRVVAALHQRSWQSVIQLMPGLPGEDQASFLRTITDTIAL 175

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +   + LY   + +GT  + M++ G         A+ + +   S     G+H
Sbjct: 176 SPHGVRLYPTLVLRGTTLHTMYESGHYTPLDLEQAIQMCSRAVSRFRERGIH 227


>gi|303231083|ref|ZP_07317823.1| radical SAM domain protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514214|gb|EFL56216.1| radical SAM domain protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 347

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 85/252 (33%), Gaps = 17/252 (6%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +       +G   ++      + ++     +       + F
Sbjct: 6   IPFFIPHVGCPHVCTFCNQSRITEISGIG---YLTPAYITSTIRDYVGESRADKYWEVCF 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ S I+ +    +L    +         I     P +V     +  R  G+  I LG
Sbjct: 63  YGGSFSAIDQELQKQLLAPANEALQAGIIDGIRCSTRPDAVSDGQLELLRSFGMKTIELG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+++  L    R H + +   A+   R     +   L+  L   +           ++
Sbjct: 123 VQSMDDTVLSLAKRGHTSDDVKLAVKQLRKFGFTVGLQLLPGLLGDSWETIIQTAVEIIA 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D + +Y + +   T   + +K G     S  +A+      ++   +H +        
Sbjct: 183 LQPDFVRIYPVLVIDHTELAEQYKSGIYEPLSLELALQYCAFLKTWFESHHITVI----- 237

Query: 257 SFLGAESLHNLN 268
              G +S   LN
Sbjct: 238 -RTGLQSTEELN 248


>gi|255655259|ref|ZP_05400668.1| radical SAM-superfamily protein [Clostridium difficile QCD-23m63]
 gi|296451244|ref|ZP_06892984.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile NAP08]
 gi|296880404|ref|ZP_06904367.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile NAP07]
 gi|296259850|gb|EFH06705.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile NAP08]
 gi|296428645|gb|EFH14529.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           difficile NAP07]
          Length = 356

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 11/224 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV----GQENFIQSFLTEMQWMRQLTGPRS 70
               + ++V    C   C +C+                 N I+  L  +     +     
Sbjct: 2   KKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADV----- 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GG+ + I+      +L    +        +I +   P  ++ +     ++   
Sbjct: 57  --EIAFFGGSFTAIDIDIQKSLLSVAKEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKT 114

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           + I LGVQSL+E+ L    R H +     +  + +N   ++   ++  LP  T  +    
Sbjct: 115 SIIELGVQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMMIGLPTDTEEKCIFT 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            ++ +    D + +Y   + K T   K+ +       +   +V+
Sbjct: 175 AKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYSPFTLEESVN 218


>gi|255100265|ref|ZP_05329242.1| radical SAM-superfamily protein [Clostridium difficile QCD-63q42]
          Length = 356

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 11/224 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV----GQENFIQSFLTEMQWMRQLTGPRS 70
               + ++V    C   C +C+                 N I+  L  +     +     
Sbjct: 2   KKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADV----- 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GG+ + I+      +L    +        +I +   P  ++ +     ++   
Sbjct: 57  --EIAFFGGSFTAIDIDIQKSLLSVAKEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKT 114

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           + I LGVQSL+E+ L    R H +     +  + +N   ++   ++  LP  T  +    
Sbjct: 115 SIIELGVQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMMIGLPADTEEKCIFT 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            ++ +    D + +Y   + K T   K+ +       +   +V+
Sbjct: 175 AKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVN 218


>gi|126698845|ref|YP_001087742.1| radical SAM superfamily protein [Clostridium difficile 630]
 gi|254974793|ref|ZP_05271265.1| radical SAM-superfamily protein [Clostridium difficile QCD-66c26]
 gi|255092181|ref|ZP_05321659.1| radical SAM-superfamily protein [Clostridium difficile CIP 107932]
 gi|255306205|ref|ZP_05350377.1| radical SAM-superfamily protein [Clostridium difficile ATCC 43255]
 gi|255313920|ref|ZP_05355503.1| radical SAM-superfamily protein [Clostridium difficile QCD-76w55]
 gi|255516599|ref|ZP_05384275.1| radical SAM-superfamily protein [Clostridium difficile QCD-97b34]
 gi|255649699|ref|ZP_05396601.1| radical SAM-superfamily protein [Clostridium difficile QCD-37x79]
 gi|260682855|ref|YP_003214140.1| radical SAM-superfamily protein [Clostridium difficile CD196]
 gi|260686453|ref|YP_003217586.1| radical SAM-superfamily protein [Clostridium difficile R20291]
 gi|306519815|ref|ZP_07406162.1| radical SAM-superfamily protein [Clostridium difficile QCD-32g58]
 gi|115250282|emb|CAJ68104.1| putative radical SAM-superfamily protein [Clostridium difficile]
 gi|260209018|emb|CBA62110.1| radical SAM-superfamily protein [Clostridium difficile CD196]
 gi|260212469|emb|CBE03373.1| radical SAM-superfamily protein [Clostridium difficile R20291]
          Length = 356

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 11/224 (4%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKV----GQENFIQSFLTEMQWMRQLTGPRS 70
               + ++V    C   C +C+                 N I+  L  +     +     
Sbjct: 2   KKRIIPIFVPHKGCPHDCIFCNQKKITGVSTDVTSEDARNIIEECLETIDKDADV----- 56

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GG+ + I+      +L    +        +I +   P  ++ +     ++   
Sbjct: 57  --EIAFFGGSFTAIDIDIQKSLLSVAKEYVEKGLVKDIRMSTRPDCIDEDILSMLKEYKT 114

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           + I LGVQSL+E+ L    R H +     +  + +N   ++   ++  LP  T  +    
Sbjct: 115 SIIELGVQSLDEKVLLDSIRGHQSEIVYKSSKMIKNSGIKLGLQMMIGLPADTEEKCIFT 174

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            ++ +    D + +Y   + K T   K+ +       +   +V+
Sbjct: 175 AKKFVELKPDCVRVYPTLVVKDTGLEKLMEQNKYNPFTLEESVN 218


>gi|325959652|ref|YP_004291118.1| histone acetyltransferase, ELP3 family [Methanobacterium sp. AL-21]
 gi|325331084|gb|ADZ10146.1| histone acetyltransferase, ELP3 family [Methanobacterium sp. AL-21]
          Length = 542

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 115/368 (31%), Gaps = 58/368 (15%)

Query: 28  CVK-KCPYCDF-----NSHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPRSISSI 74
           C   +C YC        S+               + ++Q++   +Q          +  I
Sbjct: 84  CPHGRCTYCPESEVAPPSYTGEEPAALRARMYKFDPYMQTYNRLLQLESIGHPIDKVELI 143

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVS------------------------------- 103
             GG  PS         I   +                                      
Sbjct: 144 VMGGTFPSYNVCYQEWFITKCLRAMNDFGLEDLDTKVKIRKTGELKVPEDFAYLKDVQIK 203

Query: 104 ------SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
                   V +T E  P   ++ +       GV R+ LGVQ++     + + R H   +A
Sbjct: 204 NELSSVRCVGMTFETRPDYAKIEDIDRMLNMGVTRVELGVQTIYNFIYKRIERGHRVEDA 263

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLYQLTIEKGTLF 215
           + +    R+   +++F ++  L             +     +  D + +Y   + KG+  
Sbjct: 264 VKSAQYLRDSGIKVAFHMMPGLFSDPDRDMRIFHRIFEDEKFRPDMIKIYPCLVTKGSKL 323

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRY 272
           Y + K GD    S   AVDL    + I            +I +          NL    Y
Sbjct: 324 YDLWKAGDYEPYSTEDAVDLIVKVKKILPKWVRTMRIQRDIPSQLIEAGVKKSNLGELVY 383

Query: 273 GDYIGIGPGAHS-RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEF 330
               G G      R +   HR A  +     + + +V+   +A   +E FLS E  + + 
Sbjct: 384 NKLEGEGVNCKCIRCREVGHRAANGVIPDFHN-VDLVKTEYNAAGGREIFLSQEDLSKDI 442

Query: 331 LMMGLRLR 338
           LM  LRLR
Sbjct: 443 LMGFLRLR 450


>gi|150400714|ref|YP_001324480.1| ELP3 family histone acetyltransferase [Methanococcus aeolicus
           Nankai-3]
 gi|150013417|gb|ABR55868.1| histone acetyltransferase, ELP3 family [Methanococcus aeolicus
           Nankai-3]
          Length = 563

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 129/363 (35%), Gaps = 46/363 (12%)

Query: 28  CVK-KCPYC------DFN----SHVRRYKV-------GQENFIQSFLTEMQWMRQLTGPR 69
           C   KC +C      +F     S+  +            + +IQ+     Q  +      
Sbjct: 118 CPHGKCFFCPGGTDSNFGEVPQSYTGKEPATMRGIMYDFDPYIQTKERIEQLEKVGHPTD 177

Query: 70  SISSIFFGGGTPSLIEPQNIALIL-DGIAKNWTVSSNVE---------------ITIEAN 113
            +  I  GG  PS         +     A N T+S  +E               +T+E  
Sbjct: 178 KVEIIIMGGTFPSRPPEYQDNFVKGCLDALNGTISDTLEEAQKINETAKHRCVALTVETR 237

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P            K G  ++ +GVQ++    L  + R H   + I A  L R+   ++S+
Sbjct: 238 PDYCTEKEINQMLKLGATKVEIGVQTIYNDILNHIKRGHGVEDTIKATQLLRDSGLKISY 297

Query: 174 DLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            ++  LP  +    +    E+    ++  D + +Y   + KGT  Y +++ G+    ++N
Sbjct: 298 HIMPGLPMSSKELDKKLFYEIFNNPNFKPDLIKIYPCLVIKGTELYDIYERGEFKPINDN 357

Query: 231 VAVDLYNLTQSITSAHG---LHAYEISNHSFLGAESLHNLNYWRYGDYIG--IGPGAHSR 285
            A++L    +SI            +I            NL    Y +     I       
Sbjct: 358 DAIELITYAKSIMPKWVRTSRIQRDIPATVIEEGVRKSNLGELIYKNLEAQNIKCKCIRC 417

Query: 286 VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVK 344
            +VG       I    E  +K+ R++  A    E FLS E   ++ L+  LRLR  I  K
Sbjct: 418 REVGHIIYKKGIIPKLED-IKLCREDYEANGGTEIFLSYEDTKNDILIGYLRLR--IPYK 474

Query: 345 DWE 347
            + 
Sbjct: 475 PFR 477


>gi|303229555|ref|ZP_07316343.1| radical SAM domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515680|gb|EFL57634.1| radical SAM domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 347

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 79/231 (34%), Gaps = 11/231 (4%)

Query: 25  WPF------CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFF 76
            PF      C   C +C+ +       +G   ++      + ++     +       + F
Sbjct: 6   IPFFIPHVGCPHVCTFCNQSRITEISGIG---YLTPAYITSTIRDYVGESRADKYWEVCF 62

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ S I+ +    +L    +         I     P +V     +  R  G+  I LG
Sbjct: 63  YGGSFSAIDQELQKQLLAPANEALQAGIIDGIRCSTRPDAVSDGQLELLRSFGMKTIELG 122

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+++  L    R H + +   A+   R     +   L+  L   +           ++
Sbjct: 123 VQSMDDTVLSLAKRGHTSDDVKLAVKQLRKFGFTVGLQLLPGLLGDSWETIIQTAVEIIA 182

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D + +Y + +   T   + +K G     S  +A+      ++   +H 
Sbjct: 183 LQPDFVRIYPVLVIDHTELAEQYKSGIYEPLSLELALQYCAFLKTWFESHH 233


>gi|94986872|ref|YP_594805.1| coproporphyrinogen III oxidase-like protein [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731121|emb|CAJ54483.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 356

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 80/219 (36%), Gaps = 6/219 (2%)

Query: 16  SNSLGVYVHWPFCVKKCPYCDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           +  + +++ +  C  +C +C  +          K+   + + +  T ++  +       +
Sbjct: 21  NRIIPIFLPFEGCPHRCIFCAQDKQTGLGYGGSKISLSDNLANLFTRLKKEKNTFSSEKL 80

Query: 72  -SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
              I F GGT +L+   ++ L L+ + +               P +V        + AG+
Sbjct: 81  LPEIAFYGGTFTLLPTASMQLCLNMVKQCLAEGLISGARCSTRPDAVSPAILTKLKAAGI 140

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           N I LGVQS    +L  + R +         +   +   R+   L+  +P  T   +  +
Sbjct: 141 NLIELGVQSFSNIALSLVRRGYTQHIIKEGCYNILSAGLRLGIQLLPGMPGSTAEVFLND 200

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           ++++L      L  Y   +  GT          L  P +
Sbjct: 201 VEQSLEQNPACLRFYPCLVVDGTQLAD-IWRKGLYQPWD 238


>gi|256810675|ref|YP_003128044.1| hypothetical protein Mefer_0726 [Methanocaldococcus fervens AG86]
 gi|256793875|gb|ACV24544.1| conserved hypothetical protein [Methanocaldococcus fervens AG86]
          Length = 327

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 89/246 (36%), Gaps = 22/246 (8%)

Query: 28  CVKK----CPYCDFNSHVRRYKVGQENFIQS---FLTEMQWMRQLTGPRSIS--SIFFGG 78
           C  K    C +C         +     +  +      +++   +    +      I+F  
Sbjct: 55  CPHKKNGGCIFC-----PEMGRPISVKYCNAKIPLKEQIEKQMENQKKKGFEKFHIYFYP 109

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNR-IS 134
           GT +    + +  I D       V   + ++I   P  +E       ++    G +  I 
Sbjct: 110 GTNTYAPAEKLKEIWDFCLSYEDV---IGLSIGTRPDCLEKEKLDILKEYVENGYDIWID 166

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS+ +++L  L R HN S+ I AI        ++   +I  LP ++  +     +  
Sbjct: 167 LGIQSMHQKTLEILNRGHNVSDTINAIKECHKRGIKVCGHIILGLPGESWKEMMETAKIL 226

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V+ + +Y L + K T   +M+  G+     E   V+L        S + L    +S
Sbjct: 227 SLLGVESVKIYPLVVIKNTKLEEMYWMGEYRTLDEKQYVNLVCDFLEHLSPYVLIQ-RLS 285

Query: 255 NHSFLG 260
                G
Sbjct: 286 KDKVPG 291


>gi|218782637|ref|YP_002433955.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764021|gb|ACL06487.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 353

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 4/225 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + +++    C  +C +C+  +     +    E+        + + R+  GP  IS   F 
Sbjct: 10  IPIFLPHAGCPHQCVFCNQRAITGAARPFSAEDARAEVERYLSFPRKSKGPTIIS---FY 66

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG    I  + I  +LD  ++         I     P +V   +        V  + LGV
Sbjct: 67  GGNFLGISRKRIRDLLDLASQYVNQGRVDGIRFSTRPDTVSPLSLSLLEGYPVKTVELGV 126

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS++E+ L    R H   E   A  L R         ++  LP     Q     +   + 
Sbjct: 127 QSMDEEVLEASRRGHTVLEIRTAHELLREKGYETGLQMMIGLPGDDGAQSLASAREIAAL 186

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           + D + +Y   + + +   +M + G     + + AVDL +   +I
Sbjct: 187 SPDFVRIYPTVVLENSPLAEMWRSGRYEALTLDRAVDLCSKAYAI 231


>gi|308271415|emb|CBX28023.1| hypothetical protein N47_G33470 [uncultured Desulfobacterium sp.]
          Length = 372

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 3/215 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           + V+V    C  +C +C+ N+    +  +  +  + + +      +     R+   I F 
Sbjct: 32  IPVFVPHAGCPHQCIFCNQNTVTGEKKSIPSQKELDNIIETFLRYK--GDNRNRVQIAFY 89

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           GG    I+   I  +L    K  T      I     P +++ +         V  I LGV
Sbjct: 90  GGNFLGIDDGKIKQLLVAATKYVTDGLVDSIRFSTRPDTIDDHKLGCIESFPVRTIELGV 149

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+ +  L    R H  S+ I A+ L +         ++  LP     +         + 
Sbjct: 150 QSMVDSVLLLSKRGHTNSDTINAVGLLKKRNFETGLQMMIGLPGDDENKSIATAHLISAL 209

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             D + +Y   +  G+    ++        S   A
Sbjct: 210 CPDFVRIYPTLVLAGSALAVLYAKKKYEPLSIEQA 244


>gi|169824544|ref|YP_001692155.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ATCC 29328]
 gi|167831349|dbj|BAG08265.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Finegoldia magna ATCC 29328]
          Length = 358

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 5/199 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--F 76
           + +++    C   C +C+        +V +++ I+    E++        +S   I   F
Sbjct: 8   VSLFIPHLGCPNDCIFCNQRKITNYVEVVKKDEIR---DEIKSQLANFPDKSQEQIQIAF 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + IE   +   L    +         I +   P  ++ +     ++  V  I LG
Sbjct: 65  YGGSFTGIEESAMIDYLKIANEFIEDGKVRSIRLSTRPDYIDEHILNILKEFNVETIELG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+    L    R HN+S    +  L ++   ++   ++  L K T        +  + 
Sbjct: 125 VQSMVNSVLDANLRCHNSSCVKMSTKLIKSFGFKLGLQMMTGLYKSTSEMDMYTAEELIK 184

Query: 197 YAVDHLSLYQLTIEKGTLF 215
              D + +Y   + K T+ 
Sbjct: 185 LKPDFVRIYPTLVIKNTML 203


>gi|242280924|ref|YP_002993053.1| hypothetical protein Desal_3466 [Desulfovibrio salexigens DSM 2638]
 gi|242123818|gb|ACS81514.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
          Length = 317

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 77/244 (31%), Gaps = 15/244 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C                I       Q          +   +    
Sbjct: 30  CPNRDGSISRKGCIFCS-PQGSGSGLHSLSMSIPEQWAHWQEKLSKLYTAKLYLAYLQSY 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGV 137
           + +    + +   LD   +   +     + I   P  ++       +  G+    + LG+
Sbjct: 89  SNTYCSYEELKCALD---QLNGLPGLAGLCIGTRPDCLDDEKLSLIKSLGLKETWLDLGL 145

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS    +L  + R H A +   A+ +A      +   LI  LP +T   +   ++     
Sbjct: 146 QSSNNATLDRINRGHTAEQFAEAVKMAHGHGLDVCAHLIAGLPGETAEDFIESVRFLNDL 205

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            +  +  + L + KGT   K+++ G+     ++  + +     SI     +    +   +
Sbjct: 206 PIAGIKFHNLFVGKGTPLTKLYEAGEYTPIEQDEYISMLVEAISILRTDIVIH-RLKADA 264

Query: 258 FLGA 261
             GA
Sbjct: 265 VPGA 268


>gi|78224132|ref|YP_385879.1| hypothetical protein Gmet_2936 [Geobacter metallireducens GS-15]
 gi|78195387|gb|ABB33154.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 319

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 77/215 (35%), Gaps = 7/215 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  S      V +          M + R+  G      ++F   T +    + +  
Sbjct: 50  CIYCDNASFSPGGTVAEIPIEIQMAEGMAYHRRRLGSEKFI-VYFQKFTNTYAPVERLRD 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +      +  V   + I++   P S+                  I LG+QS++++ L+ +
Sbjct: 109 LYARALAHPDV---IGISVGTRPDSLSDEALDLLADLAKRHYVCIELGLQSMDDKILQQI 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           GR H  +E + A+         +   LIY  P +T   +           V+ + ++QL 
Sbjct: 166 GRGHTLTEYLEAVARIEGRGIELCTHLIYGFPGETRDGFLRTADMMAGLPVNSVKIHQLH 225

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             KGT   +++  GD V  +    V        I 
Sbjct: 226 AVKGTRLAELYHQGDFVPITHQEYVATACDFLEIL 260


>gi|302380340|ref|ZP_07268810.1| radical SAM domain protein [Finegoldia magna ACS-171-V-Col3]
 gi|303233756|ref|ZP_07320410.1| radical SAM domain protein [Finegoldia magna BVS033A4]
 gi|302311830|gb|EFK93841.1| radical SAM domain protein [Finegoldia magna ACS-171-V-Col3]
 gi|302495190|gb|EFL54942.1| radical SAM domain protein [Finegoldia magna BVS033A4]
          Length = 358

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 75/199 (37%), Gaps = 5/199 (2%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--F 76
           + +++    C   C +C+        +V +++ I+    E++        +S   I   F
Sbjct: 8   VSLFIPHLGCPNDCIFCNQRKITNYVEVVKKDEIR---DEIKSQLANFPDKSQEQIQIAF 64

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            GG+ + IE   +   L    +         I +   P  ++ +     ++  V  I LG
Sbjct: 65  YGGSFTGIEESAMIDYLKIANEFIEDGKVRSIRLSTRPDYIDEHILNILKEFNVETIELG 124

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQS+    L    R HN+S    +  L ++   ++   ++  L K T        +  + 
Sbjct: 125 VQSMVNSVLDANLRCHNSSCVKMSSKLIKSFGFKLGLQMMTGLYKSTSEMDMYTAEELIK 184

Query: 197 YAVDHLSLYQLTIEKGTLF 215
              D + +Y   + K T+ 
Sbjct: 185 LKPDFVRIYPTLVIKNTML 203


>gi|308404960|ref|ZP_07494181.2| hypothetical protein TMLG_02139 [Mycobacterium tuberculosis
           SUMu012]
 gi|308365370|gb|EFP54221.1| hypothetical protein TMLG_02139 [Mycobacterium tuberculosis
           SUMu012]
          Length = 114

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 5/117 (4%)

Query: 11  MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGP 68
           M GQ     GVY+H PFC+ +C YCDFN++      G   + ++ +   E++        
Sbjct: 1   MPGQ---PFGVYLHVPFCLTRCGYCDFNTYTPAQLGGVSPDRWLLALRAELELAAAKLDA 57

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
            ++ +++ GGGTPSL+  + +A +LD +  ++ ++ + E++ EANP S     F   
Sbjct: 58  PTVHTVYVGGGTPSLLGGERLATLLDMVRDHFVLAPDAEVSTEANPESTWPEFFATI 114


>gi|313673189|ref|YP_004051300.1| radical sam domain protein [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939945|gb|ADR19137.1| Radical SAM domain protein [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 333

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 92/231 (39%), Gaps = 13/231 (5%)

Query: 25  WPF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
            PF  C  +C +C+ N+     K    N+ ++ +++++   ++        I F GG+ +
Sbjct: 14  IPFLGCPNRCLFCNQNAITGIDK----NYEETVISQIEDYLKI--NEKWDEIAFFGGSFT 67

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +  ++        A+ +  ++   I I   P        +   +  V  + +GVQS   
Sbjct: 68  CLN-RDSREFFYDTARRYKFNN---IRISTRPECFSEEVVEELLQNNVKTVEIGVQSTSS 123

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + L+F  RN++     + I L +  F ++   L+  + K+ +      +   L  + D+ 
Sbjct: 124 KVLKFNLRNYDKKVIFSTIALLKGNF-KICTQLMTGMYKEDLQDIFEMITDILYLSPDYA 182

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +Y   + K +    ++ +G  +     + +   ++  S    + +    +
Sbjct: 183 RIYPTVVLKNSPLEDLYLNGSFIPDPTAIIIAKTSIIYSYLLCNDIRVIRV 233


>gi|323699832|ref|ZP_08111744.1| Radical SAM domain protein [Desulfovibrio sp. ND132]
 gi|323459764|gb|EGB15629.1| Radical SAM domain protein [Desulfovibrio desulfuricans ND132]
          Length = 342

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 4/211 (1%)

Query: 26  PF--CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           PF  C  +C +C  +    R +      +     ++     L G R    + F GGT + 
Sbjct: 25  PFAGCPHRCLFCAQDRQTGRDRAVLAPILADLERDLD--AALAGGRGPYELAFYGGTFTA 82

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +        L   A+         +     P   E       R  G++ + LG+QS ++ 
Sbjct: 83  LPAPWPEAFLALAARFRERGLVTRVRCSTRPDRTEPAVLDRCRALGLDLVELGIQSFDDA 142

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L   GR +    A             +   L+  LP      ++ +++ A +   +   
Sbjct: 143 ALAASGRGYGGGAARRGCARVVESGLALGVQLLPGLPGDREGLFQADVREAAALHPETAR 202

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           LY   + +GT   +  + G+ V  + + A D
Sbjct: 203 LYPCLVIEGTDLARAWRRGEYVPWAVDRARD 233


>gi|307244263|ref|ZP_07526378.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306492413|gb|EFM64451.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 356

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 77/221 (34%), Gaps = 3/221 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +G   + ++V    C   C +C+             +  +     ++       P     
Sbjct: 2   RGKKIIPIFVPHQGCPHDCIFCNQKKITGISTDMTGDKARGI---IEDCLATIRPDVDLE 58

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I F GG+ + I+      +L    +        +I +   P  ++       +  G   I
Sbjct: 59  IAFFGGSFTAIDKDKQVELLSVAKEYKDRGLVKDIRMSTRPDCIDREGLDLVKSYGATII 118

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQS++E+ L    R HN+     +  L +    R+    +  LP  T  +     + 
Sbjct: 119 ELGVQSMDEEVLVESLRGHNSKIVYESGSLIKEAGLRLGLQQMIGLPGDTEEKCIRTARE 178

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
                 D + +Y   I K T   + +KDG     S +  VD
Sbjct: 179 FAKIGSDFVRIYPTLIIKETGLEQSYKDGYYRPFSLDECVD 219


>gi|317061972|ref|ZP_07926457.1| LOW QUALITY PROTEIN: oxygen-independent coproporphyrinogen III
           oxidase [Fusobacterium sp. D12]
 gi|313687648|gb|EFS24483.1| LOW QUALITY PROTEIN: oxygen-independent coproporphyrinogen III
           oxidase [Fusobacterium sp. D12]
          Length = 140

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 7/141 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           ++L+  E       S  LG+Y+H P+C K C +C+ N   ++     E + Q    ++++
Sbjct: 2   RFLNLLEQENV---SKQLGLYLHTPYCDKICSFCNMNR--KKVDTELEEYHQYLCQQIEY 56

Query: 62  MRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            RQ +      +  +FFGGGTP++   + +  IL  + KN+  S++ E+T E    ++ V
Sbjct: 57  YRQFSFCQSSDLDVVFFGGGTPTIYSHRQLQNILQCLQKNFHFSTSYEMTFETTLHNLGV 116

Query: 120 NNFQGYRKAGVNRISLGVQSL 140
              +  ++  VNR+S+G+Q+L
Sbjct: 117 EKAKLLQENAVNRLSVGIQTL 137


>gi|332702004|ref|ZP_08422092.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552153|gb|EGJ49197.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 345

 Score =   99 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 2/189 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C         +            E+  + + TG + +  I F G T + +   
Sbjct: 31  CPGRCRFCSQRLQTGLDRKPLAEHHAQLAAELDRLYR-TGSQPLE-IGFYGATFTALPEP 88

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                +   A          I     P + + +     R  G+  + +GVQ+ + ++L  
Sbjct: 89  WPERFVALAASYMKQGLIARIRCSTRPDACDFSLLSRLRDLGLELVEIGVQTFDAEALAR 148

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            GR H  +EA+A           +   L+  LP Q+   +  ++  A+S   + + L+  
Sbjct: 149 SGRGHGPAEALAGCRAVSEASLALGLHLMPGLPGQSGAAFLRDVDTAVSLEPESVRLHPC 208

Query: 208 TIEKGTLFY 216
            +  GT   
Sbjct: 209 LVLAGTPLA 217


>gi|293342160|ref|XP_002725159.1| PREDICTED: rCG52086-like [Rattus norvegicus]
 gi|293353904|ref|XP_002728336.1| PREDICTED: rCG52086-like [Rattus norvegicus]
 gi|149030303|gb|EDL85359.1| rCG52086, isoform CRA_a [Rattus norvegicus]
          Length = 547

 Score =   99 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 81/423 (19%), Positives = 149/423 (35%), Gaps = 73/423 (17%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAIKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVDHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHRVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWEMLAGRNLDIECERN---------------LQRQGF--IERVQFSRLRCT 379
           LR+  S + +    G  + I  E +                Q QGF  +   +  R+   
Sbjct: 453 LRK-CSEETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAERIALE 511

Query: 380 QRG 382
           + G
Sbjct: 512 EHG 514


>gi|167042593|gb|ABZ07316.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_ANIW133I6]
          Length = 526

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 125/364 (34%), Gaps = 48/364 (13%)

Query: 28  CVK-KCPYCD----FN---SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C   +C YC     FN   S+  +  V   +    +   +Q   +L              
Sbjct: 89  CPHGRCTYCPGGIEFNTPNSYTGKEPVTISSIKNGYDANIQITSKLNQLHIFGHDTTKIE 148

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSS-----------------NVEITIEANPSS 116
           +   GGT   +        +                            NV  TIE  P  
Sbjct: 149 LVVVGGTFLFMPKDYQENFIKSCYDALNGFPSPNLEIAMENNQKTKNRNVGFTIETKPDY 208

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
            +  +       GV R+ +GVQSL E+  + + R HN ++ I +  ++++   ++   ++
Sbjct: 209 CKKEHVDLMLSYGVTRVEIGVQSLHERVYKIVNRGHNYNDVIDSFQISKDSGYKIVAHMM 268

Query: 177 YALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             LP  T  +   + ++     +   D L +Y   + K T  Y  + +      ++   +
Sbjct: 269 PGLPTMTPNEDINDFKKLFNDSNLKPDMLKIYPSLVLKNTPLYNDYLEKKYKPYTDEEML 328

Query: 234 DLYNLTQSITSAH---GLHAYEISN---HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVK 287
            +    + +            EI+     +   A +L  +   R  D      G  S   
Sbjct: 329 HVLTEAKKMVPKWVRIMRVQREITPGEIQAGPKAGNLRQIVQKRLKD-----QG-FSCKC 382

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDW 346
           +      +S +  P   LK+ ++   +   +E F+S + + DE +   LRLR+   +   
Sbjct: 383 IRCREAGLSRKNMPSELLKLGKEEYDSSNGRETFISFDDE-DETIYGFLRLRKPSELAHR 441

Query: 347 EMLA 350
           + + 
Sbjct: 442 DEIT 445


>gi|124027620|ref|YP_001012940.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456]
 gi|123978314|gb|ABM80595.1| predicted Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456]
          Length = 453

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 83/238 (34%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCD----FNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +C +C     F + VR       +    +++ +    ++++  +      + +    
Sbjct: 176 CPFRCRFCQVPWLFKARVRYRSPSVVEEAVRDYVAAGKKHIRFVAPIG----FAYMSRRP 231

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGV 137
           G P++   + I  +L  + +   +        E  P  V     +  ++   NR I+LG+
Sbjct: 232 GEPNV---EAIEELLTAVRRAGGIPYLGTFPSETRPEYVTPEVLEVVKRLAANRRIALGL 288

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS + + L    R H   +   A+ L      R   D+++ LP +     E  +      
Sbjct: 289 QSGDNRVLEVSDRGHTVEQVFEAVELVVRYGFRPVVDILFGLPGEDEEAVEKTVDAMYKL 348

Query: 198 AV--DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           A     L L+      GT F K       V P    A+    L + +         +I
Sbjct: 349 AEMGAQLRLHTFIPLPGTPFAK--AKPKPVHPRYREAIRR-LLGRGVLEGDWEEQEQI 403


>gi|78217967|gb|ABB37316.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 309

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 2/206 (0%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           +C   +                  E+Q   +     S   + + GGT + ++       +
Sbjct: 2   FCAQTAQTGVGPAALSERYSQLQKELQLAYE--AGESPFELAYYGGTFTALDDMWQEKFI 59

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
               +         I     P  V+V   Q   + G++ + LG+QS    +L   GR + 
Sbjct: 60  ALGRQYRHKGLVTSIRCSTRPDCVDVAGLQRLHRMGLDTVELGIQSFSNDALTRSGRGYT 119

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           A  A+    + R     +   L+  LP  +   +  +++ A S   D + LY   + +GT
Sbjct: 120 AHTAVTGCRIVREAGLGLGIQLMPGLPGHSEGAFLRDVRTACSLGPDMVRLYPCLVFEGT 179

Query: 214 LFYKMHKDGDLVLPSENVAVDLYNLT 239
           L     +DG         A  +  + 
Sbjct: 180 LLASWWRDGRYRPWGVARASVMLGMA 205


>gi|297619609|ref|YP_003707714.1| hypothetical protein Mvol_1084 [Methanococcus voltae A3]
 gi|297378586|gb|ADI36741.1| conserved hypothetical protein [Methanococcus voltae A3]
          Length = 352

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 19/211 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFG 77
           C  K        C YC      R   V   N   S   ++++       + I+   ++F 
Sbjct: 76  CPNKDGTLDDKGCIYC--PKMGRPISVEYCNRKYSLKEQIEFQLNEHSRKGITNFYVYFY 133

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNR-I 133
             T +   P+N+  + D      TV   + ++I   P  +EV          K G +  I
Sbjct: 134 PATNTYDTPENLKKLWDFALSYNTV---IGLSIGTRPDCLEVEKLDILETYVKQGYDIWI 190

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LGVQSL++++L  L R HNA++ + AI   +    ++   +I  LP +T  +     + 
Sbjct: 191 DLGVQSLQDKTLDLLNRKHNATDTLNAIKNCKERGIKVCGHIILGLPGETKKEMRETAEL 250

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                +D L +Y L + + T   +M+ + + 
Sbjct: 251 LSLIKIDALKIYPLVVIENTKLEEMYWNAEY 281


>gi|15668663|ref|NP_247462.1| hypothetical protein MJ_0486 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496003|sp|Q57910|Y486_METJA RecName: Full=Uncharacterized protein MJ0486
 gi|1591189|gb|AAB98477.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 322

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 31/262 (11%)

Query: 28  CVKK----CPYCDFNSHVRRYKVGQENFIQS---FLTEMQWMRQLTGPRSIS--SIFFGG 78
           C  K    C +C         +     +  +      +++   +    +      I+F  
Sbjct: 50  CPHKKNGGCIFC-----PEMGRPISVKYCSAKIPLKEQIKKQMENQKKKGFKKFYIYFYP 104

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNR-IS 134
           GT +    + +  I D       V   + ++I   P  +E        +    G +  I 
Sbjct: 105 GTNTYAPAEKLKEIWDFSLSYKEV---IGLSIGTRPDCLEKEKLDILAEYVENGYDIWID 161

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQS+ +++L  L R H+ S+ I AI        ++   +I  LP ++  +     +  
Sbjct: 162 LGVQSMHQKTLEILNRGHDVSDIIKAIKDCHKRGIKVCGHVILGLPGESWKEMMETAKIL 221

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITS 244
               ++ + +Y L + KGT   +M+  G+            +      +  Y L Q ++ 
Sbjct: 222 SLLEIEAVKIYPLVVVKGTKLEEMYWKGEYRTLDENQYISLVCDFLEHLSPYVLIQRLSK 281

Query: 245 AHGLHAYEISNHSFLGAESLHN 266
                + ++S   +LG   + N
Sbjct: 282 DKVPESIKVSPEWYLGRLKIMN 303


>gi|260168408|ref|ZP_05755219.1| coproporphyrinogen III oxidase [Brucella sp. F5/99]
          Length = 158

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISS 73
              S+ +Y+H P+C + C YC  N+ +   +   ENF+ + L E++ +   LT    ++ 
Sbjct: 43  PEESVSLYIHVPYCSQICHYCGCNAKMAIREDVIENFVNALLGEIRTVSASLTARPRVAH 102

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           + +GGGTPS++       +L  I   +    ++E  IE +P +V
Sbjct: 103 LHWGGGTPSILNAGQFQTVLAAIRTAFDFDLSMEHAIELDPRTV 146


>gi|218460807|ref|ZP_03500898.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 139

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSIS 72
             +  + VY+H PFC   C YC  ++ + R      +++     E++ +         + 
Sbjct: 43  AAAGPVSVYLHVPFCRSICWYCGCHTTITRQDAPVADYLDVMKEEIELVSFAAGNDVPVK 102

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            + FGGGTPS+++PQ  + ++  +   +T  +   + 
Sbjct: 103 YVHFGGGTPSVMKPQEFSALMGKLRSAFTFEAKAGVA 139


>gi|308048378|ref|YP_003911944.1| hypothetical protein Fbal_0658 [Ferrimonas balearica DSM 9799]
 gi|307630568|gb|ADN74870.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
          Length = 311

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 90/246 (36%), Gaps = 20/246 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFG 77
           C  +        C +C  N      + G +  +   L   +  R+    R       +F 
Sbjct: 33  CPNRDGSLGVGGCTFC--NVSSFSAEHGSKASVAEQLQAGRARREGEQRRADKRYLAYFQ 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI- 133
             T +       A++     +   VS  V I +   P  V              G+    
Sbjct: 91  AYTSTY---DEYAVLKRKYEEALAVSDIVGICVGTRPDCVPDEVLALLAGYQQQGMEVWL 147

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q+  + +L+ + R H+ +     +  AR    ++   LI  LP +T    E  LQ+
Sbjct: 148 ELGLQTANDSTLKKINRGHDFAAYADTVARARLYGLKVCTHLILGLPGETPADAEQTLQQ 207

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L+   D L L+ L + +G++  K  + G L L  ++  +D        T A  ++   +
Sbjct: 208 VLAVGTDGLKLHPLHVVEGSIMAKQWRAGRLALWDQDTYMDCAARLIQHTPAEVVYH-RV 266

Query: 254 SNHSFL 259
           S ++  
Sbjct: 267 SAYARP 272


>gi|289425685|ref|ZP_06427456.1| coproporphyrinogen III oxidase domain protein [Propionibacterium
           acnes SK187]
 gi|289153904|gb|EFD02598.1| coproporphyrinogen III oxidase domain protein [Propionibacterium
           acnes SK187]
          Length = 117

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 1/117 (0%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS     L+ L R H    A  A   AR   F  ++ D+IY  P +T       L R L
Sbjct: 1   MQSASPGVLQVLERAHTPGRAFDAAREARAAGFEHVNLDMIYGTPTETDDNVRETLDRVL 60

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              VDH+S Y L +E GT   +    G L  P E+V    Y +  S   + G   YE
Sbjct: 61  ETGVDHVSAYSLIVEDGTRMARKVNKGILPAPDEDVLARRYEMISSTLESEGFEWYE 117


>gi|118581877|ref|YP_903127.1| putative radical SAM protein [Pelobacter propionicus DSM 2379]
 gi|118504587|gb|ABL01070.1| conserved hypothetical radical SAM protein [Pelobacter propionicus
           DSM 2379]
          Length = 313

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S   +         +     M + R   G      I+F   T +      + +
Sbjct: 53  CVYCNNVSFSPKATQPVIPIEEQMAQGMAYHRTRLGSEKFI-IYFQKYTNTYAS---LDV 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + D   +       + I++   P ++     +   +    R   + LG+QS+ +  L  +
Sbjct: 109 LADFYHRALDHPDVLGISVGTRPDALSDEALELLTEIARTRYVCLELGLQSINDDILADI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E +  +  A      +   LIY  P +T   +        S  VD + L+QL 
Sbjct: 169 NRGHTLDEYLETVQRAAGRNFDICTHLIYGFPGETREGFLKSANLIASLPVDSIKLHQLH 228

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
             +GT   + +  G+        
Sbjct: 229 AVEGTELARRYFRGEYRPLKIEE 251


>gi|301119439|ref|XP_002907447.1| elongator complex protein, putative [Phytophthora infestans T30-4]
 gi|262105959|gb|EEY64011.1| elongator complex protein, putative [Phytophthora infestans T30-4]
          Length = 684

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 75/236 (31%), Gaps = 37/236 (15%)

Query: 32  CPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C YC            D  S +R  +   +  +Q     +           I  +  GG 
Sbjct: 188 CYYCPNEPDQPRSYLHDEPSVLRANRNDFDPVLQFCDRCVTLAMNGHPVDKIELLVLGGT 247

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN----------------------VEITIEANPSSV 117
             S         I D      T                          + IT+E  P  +
Sbjct: 248 WASYPVEYQETFIRDLFYAANTFFEREKRERHSLDDEKLENETAAVKIIGITLETRPDCI 307

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
                + +R+ G  R+ LG+Q  ++  L+ + R H  +EA+ A+ L R+   +    L+ 
Sbjct: 308 TPEELRRFRRYGCTRVQLGIQHTDDAILKKINRGHTLAEAVQALKLLRDCCYKTDIHLMP 367

Query: 178 ALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            LP     +        L       D   +Y   I   T+  K + +G  V  S++
Sbjct: 368 NLPGSDPEKDRAMFDYVLHSPDLQADQWKIYPCEITPWTVIKKWYDEGSYVPYSDD 423


>gi|229591062|ref|YP_002873181.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas fluorescens SBW25]
 gi|229362928|emb|CAY49850.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Pseudomonas fluorescens SBW25]
          Length = 420

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 118/380 (31%), Gaps = 51/380 (13%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-S 70
           + Q    L + +HWP                      + + +S   E+  +    G R  
Sbjct: 44  SRQRQRPLALTLHWP-----------------ASTPSDAYRRSLAQEIHLIGCHLGSRQP 86

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
           +  + + G  P       +  +L+ +  +       +  I+ +P   +       R  G 
Sbjct: 87  VDYLQWRGAAPIGDVQALMTPLLERLHFHEH--DRGDYGIDLDPRHTDWAGVGLLRDLGF 144

Query: 131 NRISLGVQSLE--EQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           NR+ +GV      +   +   R  + +   + I  AR   F  +S DL Y    QT+  +
Sbjct: 145 NRMCIGVPDARAEDAYSQAYYR--DPAPIQSLIDAARTFDFRSVSVDLGYGSAWQTLASF 202

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E++L   ++   D L ++           +        L +      +  L      A G
Sbjct: 203 ELKLASLIALEPDRLQVFDYARPPSRYLAQSPS----ALCNAADKTAMRQLCYEHLDAAG 258

Query: 248 LHAYEISNHSFLG-----AESLHNLNYW-------RYGDYIGIGPGAHSRVKVGSHRVAI 295
            H   +   +        A+    L+          Y D+IG+G GA S++     + A 
Sbjct: 259 YHYIGLGQFARGDDDLTQAQERGRLSRTCEGFTLHGYCDHIGLGLGAISQIDTLCAQNAT 318

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD 355
                   + + +     A  +     +     + ++  L     + ++  E   G    
Sbjct: 319 ----DEHVYAQALENGQLATCQGWQRDAGDALRDCVVERLACDLELDIQGIERRYGVIFA 374

Query: 356 IE------CERNLQRQGFIE 369
                         R G IE
Sbjct: 375 RYFSSIWPLLEEWNRDGLIE 394


>gi|329764813|ref|ZP_08256406.1| ELP3 family histone acetyltransferase [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329138726|gb|EGG42969.1| ELP3 family histone acetyltransferase [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 528

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 91/277 (32%), Gaps = 37/277 (13%)

Query: 28  CVK-KCPYC-------DFNSHVRRYK----VGQENFIQSF--LTEMQWMRQLTGPRSISS 73
           C   +C YC         NS+  +        Q  +      +++++ +       S   
Sbjct: 91  CPHGRCTYCPGGIEYNSPNSYTGKEPSTLNAIQNEYDPKLQIISKIEKLIAFGHDPSKME 150

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSS-----------------NVEITIEANPSS 116
           I   GGT   +        +                            NV  TIE  P  
Sbjct: 151 IVIVGGTFLFMPKDYQENFIKSCYDALNGVDSKNLEEAKSNNEHAKIRNVGFTIETKPDY 210

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
            +  +       G+ RI +GVQSL+E+  + + R H+ ++ + +  ++++   ++   ++
Sbjct: 211 CKQKHVDMMLDYGITRIEIGVQSLQERIYKIVNRGHDYNDVVESFQISKDAGYKIVAHMM 270

Query: 177 YALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             LP  T      + ++         D L +Y   + + T  Y  +K  +    S+   +
Sbjct: 271 PGLPTMTPEGDIEDFKKLFEDTSLKPDMLKIYPSLVIENTPLYDEYKRKEYTPYSDEDMI 330

Query: 234 DLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL 267
            +    +              EIS +  +      NL
Sbjct: 331 RVLTEVKKNIPKWVRIMRVQREISANEIIAGPKSGNL 367


>gi|217077627|ref|YP_002335345.1| oxygen-independent coproporphyrinogen III oxidase [Thermosipho
           africanus TCF52B]
 gi|217037482|gb|ACJ76004.1| oxygen-independent coproporphyrinogen III oxidase [Thermosipho
           africanus TCF52B]
          Length = 296

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 76/187 (40%), Gaps = 6/187 (3%)

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            E+         +S   I F GGT + I  +    ++  + K      +  I I   P  
Sbjct: 10  KELINTLSFFLDKSPEEIAFYGGTFTAIPLEKQKELIALVRK---FYPDTPIRISTRPDE 66

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
           ++  N +  ++  V  + +G+QS+ +  L    R H+  + + A++L +     +S  L+
Sbjct: 67  LDYENLKFLKQNNVKTVEIGIQSMFDDVLSAANRGHSRKDNLNAVNLLKEFGFEISAHLM 126

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
             L    + +  + +Q  L+  V    ++   I K T   K++ +G     + + AV   
Sbjct: 127 IGLLNDNIKKDLLSIQELLNLGVKMFRIHPTIIFKNTELEKLYLEGKYNPLTLDEAV--- 183

Query: 237 NLTQSIT 243
           N+   + 
Sbjct: 184 NIASEML 190


>gi|73993905|ref|XP_534563.2| PREDICTED: similar to elongation protein 3 homolog [Canis
           familiaris]
          Length = 597

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 151 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 209

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 210 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 269

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 270 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 329

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 330 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 389

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 390 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 445

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 446 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 502

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 503 LRK-CSEETFR 512


>gi|301757212|ref|XP_002914456.1| PREDICTED: elongator complex protein 3-like [Ailuropoda
           melanoleuca]
          Length = 547

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|291385839|ref|XP_002709495.1| PREDICTED: elongation protein 3 homolog [Oryctolagus cuniculus]
          Length = 547

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ + G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWQSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|291288905|ref|YP_003505721.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290886065|gb|ADD69765.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 343

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 9/230 (3%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            +  L V++ +  C  +C YC+ +       V   N I S   ++     +      + +
Sbjct: 2   KNRILPVFITFAGCTSRCVYCNQHRITG---VRPSNVISSARQQISECLSMDA--KWTEL 56

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F GG+ S +       I   + K    +    +    +P  +         + GV  I 
Sbjct: 57  AFYGGSFSCLPDG----IRSELYKLAKETGINTLRFSTSPDCINQKILDESVRNGVKTIE 112

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LGVQSL++  L+   R + ASE  AA    +         L+  L K+    +   + RA
Sbjct: 113 LGVQSLDDTVLKANKRPYLASECEAAFAHVKTAVEHAGIQLMTGLYKEDFNSFAKTVDRA 172

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +    D+  +Y   + + T    + + G+ V  +   AV        + S
Sbjct: 173 VMMRADYARIYPTVVIEETELADLWRTGEYVPLTLADAVARCAYGFILLS 222


>gi|194041549|ref|XP_001928660.1| PREDICTED: elongator complex protein 3-like [Sus scrofa]
          Length = 547

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 73/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  V IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCVGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|15606062|ref|NP_213439.1| hypothetical protein aq_632 [Aquifex aeolicus VF5]
 gi|2983247|gb|AAC06843.1| hypothetical protein aq_632 [Aquifex aeolicus VF5]
          Length = 317

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 19/239 (7%)

Query: 26  PF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           PF C  +        C YC   S            +Q     ++  ++  G     +I++
Sbjct: 33  PFTCPNRDGTKGRGGCTYCYDGSKPSMLSPVIPLEVQ-IKEGIERAKKKYGEDIYFTIYY 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---- 132
              T +  + + +  + D   K       V I +   P            +   N+    
Sbjct: 92  QSYTNTYADIETLKKVYDTALK---FEGVVGIDVGTRPDCAPEEVLD-LLEYYANKGLEV 147

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            +  G+QS   ++L+ + R H  S+ + A+   +    ++   +I  LP +T   +    
Sbjct: 148 WVEYGLQSANFETLKKINRQHGVSDFVDAVLRTKKRNLKVCAHMIIGLPGETREDFIETA 207

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   S  +D + ++ L + KGT+  K + + +    +     +       +     +  
Sbjct: 208 KLIASLPIDGIKIHPLHVIKGTVMEKQYLNEEFKTLTLEEYAEYCADVIELLPPDMVVH 266


>gi|281347174|gb|EFB22758.1| hypothetical protein PANDA_002345 [Ailuropoda melanoleuca]
          Length = 489

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 95  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 153

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 154 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 213

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 214 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 273

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 274 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 333

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 334 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 389

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 390 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 446

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 447 LRK-CSEETFR 456


>gi|149746240|ref|XP_001495637.1| PREDICTED: similar to Elongator complex protein 3 isoform 1 [Equus
           caballus]
          Length = 547

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|195539533|ref|NP_001124234.1| elongator complex protein 3 [Bos taurus]
 gi|145558900|sp|Q2KJ61|ELP3_BOVIN RecName: Full=Elongator complex protein 3
 gi|158455138|gb|AAI05501.2| ELP3 protein [Bos taurus]
 gi|296484941|gb|DAA27056.1| elongator complex protein 3 [Bos taurus]
          Length = 547

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|289193223|ref|YP_003459164.1| hypothetical protein MFS40622_1757 [Methanocaldococcus sp.
           FS406-22]
 gi|288939673|gb|ADC70428.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22]
          Length = 318

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 94/263 (35%), Gaps = 31/263 (11%)

Query: 28  CVKK----CPYCDFNSHVRRYKVGQENFIQS---FLTEMQWMRQLTGPRSIS--SIFFGG 78
           C  K    C +C         +     + ++      +++   +    +      I+F  
Sbjct: 46  CPHKKNGGCIFC-----PEMGRPISVKYCRANIPLKEQIEKQMENQRKKGFKKFYIYFYP 100

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNR-IS 134
           GT +    + +  I D       V   + ++I   P  +E        +    G +  I 
Sbjct: 101 GTNTYAPAEKLKEIWDFSLSYEDV---IGLSIGTRPDCLEKEKLDILAEYVERGYDIWID 157

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS+ +++L  L R HN S+ I AI        ++   +I  LP +T  +     +  
Sbjct: 158 LGIQSMHQKTLEILNRGHNVSDTIKAIKDCHKRGIKVCGHIILGLPGETWKEMIETAKIL 217

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITS 244
               ++ + +Y L + K T   +M+  G+            +      +  Y L Q ++ 
Sbjct: 218 SLLDIEAVKIYPLVVVKDTKLEEMYWKGEYRTLDEKQYINLVCDFLEHLSPYVLIQRVSK 277

Query: 245 AHGLHAYEISNHSFLGAESLHNL 267
                  ++S   +LG   + N 
Sbjct: 278 DKVPENIKVSPEWYLGRLKIMNR 300


>gi|118576344|ref|YP_876087.1| histone acetyltransferase [Cenarchaeum symbiosum A]
 gi|118194865|gb|ABK77783.1| histone acetyltransferase [Cenarchaeum symbiosum A]
          Length = 522

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 38/267 (14%)

Query: 25  WPF-CVK-KCPYC-------DFNSHVRRYKVGQENFIQSF------LTEMQWMRQLTGPR 69
            P+ C   +C YC         NS+     +        +         +  +R      
Sbjct: 86  MPYACPHGRCTYCPGGKASNTPNSYTGGEPIAAGAMNSGYDPGSQVRAGLARLRAHGHDA 145

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS-----------------NVEITIEA 112
           +   I   GGT   +  +     +         S+                 NV +TIE 
Sbjct: 146 AKLEIVIVGGTFLFMPQEYQEWFVKSCYDALNGSASSGIEDAKHLNETAAHRNVGLTIET 205

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P   +  +       G  R+ +GVQSL+E+  + + R HN  + + +   A++   +++
Sbjct: 206 KPDYCKRVHVDAMLGFGATRVEIGVQSLQEEVYKRVNRGHNYQDVVESFAAAKDAGYKVA 265

Query: 173 FDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
             ++  LP  T      +++          D L +Y   + +GT  Y  +  G+    +E
Sbjct: 266 AHMMPGLPGATPEGDIEDMRMLFEDPALRPDMLKIYPALVVRGTPMYDEYARGEYSPYTE 325

Query: 230 NVAVDLYNLTQS---ITSAHGLHAYEI 253
             AV + +  ++     +       EI
Sbjct: 326 EEAVRVLSEAKARVPRWARIMRVQREI 352


>gi|312904054|ref|ZP_07763222.1| hypothetical protein HMPREF9512_01805 [Enterococcus faecalis
          TX0635]
 gi|310632530|gb|EFQ15813.1| hypothetical protein HMPREF9512_01805 [Enterococcus faecalis
          TX0635]
          Length = 93

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 20 GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            Y+H PFC   C YCDFN      +   + +IQS L E+Q  + L   + + +I+ GGG
Sbjct: 17 SAYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYIQSLLKEIQLTQALYPEQEMKTIYIGGG 75

Query: 80 TPSLIEPQNIALILDGIA 97
          TP+ +  + + ++L G+ 
Sbjct: 76 TPTSLSAKQLDVLLKGVR 93


>gi|149746246|ref|XP_001495677.1| PREDICTED: similar to Elongator complex protein 3 isoform 2 [Equus
           caballus]
          Length = 499

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 131/363 (36%), Gaps = 55/363 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LRE 339
           LR+
Sbjct: 453 LRK 455


>gi|26353468|dbj|BAC40364.1| unnamed protein product [Mus musculus]
          Length = 566

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 120 HISFTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 178

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              + +  V IT
Sbjct: 179 HSVDKVEFIVMGGTFMALPEEYRDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGIT 238

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H    A  + HLA++   
Sbjct: 239 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACESFHLAKDSGF 298

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 299 KVVTHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 358

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 359 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 414

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 415 IQCRDVRTREVGIQEIHHRVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 471

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 472 LRK-CSEETFR 481


>gi|126304205|ref|XP_001382052.1| PREDICTED: similar to Elongation protein 3 homolog (S. cerevisiae)
           [Monodelphis domestica]
          Length = 607

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 126/365 (34%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+    +  ++Q
Sbjct: 99  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IDQLKQ 157

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   +++  + 
Sbjct: 158 LGHSVDKVEFIVMGGTFMALSEEYRDYFIRNLHDALSGHTSNSVSEAVRYSERSLTKCIG 217

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++ 
Sbjct: 218 ITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDA 277

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + LY   + +GT  Y++ K G  
Sbjct: 278 GFKVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGMKLYPTLVIRGTGLYELWKSGRY 337

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S +  V    L   I +        Y +          S +   +L  L + R  D 
Sbjct: 338 KSYSPSCLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD- 393

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +GI        +VG   +   +  +    +++VR++  A    E FLS E    + L+  
Sbjct: 394 LGIQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPEQDILIGL 450

Query: 335 LRLRE 339
           LRLR+
Sbjct: 451 LRLRK 455


>gi|148704074|gb|EDL36021.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_c [Mus
           musculus]
          Length = 591

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 145 HISFTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 203

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              + +  V IT
Sbjct: 204 HSVDKVEFIVMGGTFMALPEEYRDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGIT 263

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H    A  + HLA++   
Sbjct: 264 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACESFHLAKDSGF 323

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 324 KVVTHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 383

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 384 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 439

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 440 IQCRDVRTREVGIQEIHHRVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 496

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 497 LRK-CSEETFR 506


>gi|269215949|ref|ZP_06159803.1| hypothetical protein HMPREF0762_00622 [Slackia exigua ATCC 700122]
 gi|269130208|gb|EEZ61286.1| hypothetical protein HMPREF0762_00622 [Slackia exigua ATCC 700122]
          Length = 379

 Score = 96.1 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 24/352 (6%)

Query: 42  RRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
                 +  ++ +   EM    +       +  ++   GG+PS++    +  I+    + 
Sbjct: 34  TGDAAARSAYLDALEAEMAASARRGDFDGVTFEALRVVGGSPSIMNGDRLGRIVAAARRG 93

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
             ++   E  +EA P +V   +  G+ +  V+ +SL V S+ E+ L  +G  ++A     
Sbjct: 94  LPLAHGCEACVEALPQTVCTASLTGWSQGSVDAVSLRVGSVHERELAAIGATYDADAVRN 153

Query: 160 AIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK- 217
           A+          +   ++  +P QT       L+  + +    + +      +G++    
Sbjct: 154 AVLFLDRFHVDTLEAVIVVGIPGQTPQSLRRTLRACVGFESKRIRIEPY---RGSIIGSG 210

Query: 218 -MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
            + +         + A  L++  +   +  G            GA S  +    +  D+ 
Sbjct: 211 ALDETLAAHAAGIDDASLLFDAARDFLAGQGFAHRSCDLFVRTGARSAFDDARLQGCDFF 270

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHA-VVEKEFLSSEQQADEFLMMGL 335
             G  A + V  G    + S       +   V  +     V    +  + +A    +   
Sbjct: 271 EFGLDART-VADGFLCHSTS------DYATYVECSASPDAVFDRIVEEDDRARRLRLACC 323

Query: 336 RL--REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTM 385
           RL   E + +      A          +L+  G ++R     +  T  GM +
Sbjct: 324 RLGALERVPLD-----AHDPDAEAFFASLESMGLVKRKGGD-VSLTSAGMLL 369


>gi|213422841|ref|ZP_03355879.1| coproporphyrinogen III oxidase [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 68

 Score = 96.1 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 41/63 (65%)

Query: 18 SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           L +Y+H P+CV+KCPYCDFNSH  + +V  ++++Q  L+++         R + +IF G
Sbjct: 6  PLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLSDLDADVAWAQGREVKTIFIG 65

Query: 78 GGT 80
          GGT
Sbjct: 66 GGT 68


>gi|284123339|ref|ZP_06386921.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829261|gb|EFC33668.1| oxygen-independent coproporphyrinogen III oxidase [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 140

 Score = 95.8 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)

Query: 42  RRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGGTPSLIEPQNIALILDGIAKN 99
           R  +   + F+     E+    +  G R   + +I+FGGGTP+ +  Q++  IL  I + 
Sbjct: 3   RPREKRVQTFLDGLEQELCLYARDVGLRKIPVHTIYFGGGTPTTLPSQDLIGILHAIRRW 62

Query: 100 WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL-GRNHNASEAI 158
           + V  + E+++E +P +V     +  R+AG  R+S+G QS ++  L  L GR++      
Sbjct: 63  FLVEDDAEVSVEVHPGTVTAEALRALRQAGFTRLSVGGQSFDQTELLELGGRSYGVG-VR 121

Query: 159 AAIHLARNI-FPRMSFDLI 176
             I  A    F  +S DL+
Sbjct: 122 QVISWALAAGFTNISLDLM 140


>gi|294101544|ref|YP_003553402.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261]
 gi|293616524|gb|ADE56678.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261]
          Length = 315

 Score = 95.8 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 79/214 (36%), Gaps = 21/214 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT---PSLI 84
           C  +C YCD  +    Y+    + + + L+ +           +   +FGG     P  +
Sbjct: 13  CPHRCIYCDQRAITGEYQPPSPHEVVTMLSTL--------LEPVELCYFGGSFTCQPERL 64

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + + +A I+          S   +    +P  +  +  +  +K  ++ + LG+ SL++  
Sbjct: 65  QEEYLAAIVAAP-------SGSSVRFSTHPLCISRDTVERLKKFPISMVELGISSLDDHV 117

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH--- 201
           L    R ++  + + A+ L  +    ++  ++  LP Q +     +L +           
Sbjct: 118 LSLCNRGYSEKDGLKALKLLLDQGFSVAAQMMVGLPTQNLKSSLEDLFKLAELKGPRSIT 177

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           L  Y   + + T+   +   G     S + A   
Sbjct: 178 LRFYPCLVLRNTMLENLLLSGQYTPLSVSEAAHW 211


>gi|33469023|ref|NP_083087.1| elongator complex protein 3 [Mus musculus]
 gi|81881127|sp|Q9CZX0|ELP3_MOUSE RecName: Full=Elongator complex protein 3
 gi|12848586|dbj|BAB28009.1| unnamed protein product [Mus musculus]
 gi|34785782|gb|AAH57453.1| Elongation protein 3 homolog (S. cerevisiae) [Mus musculus]
 gi|148704073|gb|EDL36020.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_b [Mus
           musculus]
          Length = 547

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              + +  V IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H    A  + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVTHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHRVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|322421185|ref|YP_004200408.1| hypothetical protein GM18_3704 [Geobacter sp. M18]
 gi|320127572|gb|ADW15132.1| conserved hypothetical protein [Geobacter sp. M18]
          Length = 317

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD +S   +         +     M + R+         ++F   T +    + +  
Sbjct: 51  CIYCDNSSFSPKETQAVIPIEEQMAAGMAYHRERLSSEKFI-VYFQKYTNTYGPAEKLED 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +     +       + I++   P S+     +   +    R   + LG+QS+++  L  +
Sbjct: 110 L---YRRALGHPDVLGISVGTRPDSLSPTAIELLTEIARERYVCVELGLQSMDDAILSRI 166

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E + A+         +   LIY  P +  + +    +      V  + L+QL 
Sbjct: 167 NRGHTLAEYLDAVERLSGRGLDICTHLIYGFPGEKRSGFLKTARLIAGLPVTSVKLHQLH 226

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
             + T   +M++DG       + 
Sbjct: 227 AIENTRLAEMYRDGSWQPIGIDE 249


>gi|167622996|ref|YP_001673290.1| putative radical SAM protein [Shewanella halifaxensis HAW-EB4]
 gi|167353018|gb|ABZ75631.1| conserved hypothetical radical SAM protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 313

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC  N     ++   E  IQ  L + +        + I+  +F   
Sbjct: 33  CPNRDGTLGKGGCTYC--NVASFSHEHKTELSIQEQLAQGRERLSTKSSKYIA--YFQAY 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +        ++     +    S  V + +   P  V     +        GV+    L
Sbjct: 89  TSTY---DEYLVLKQKYDEAIQDSDIVGLCVGTRPDCVPDEVLELLVGYQNDGVDVWLEL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L+ + R H+ +     +  AR +  ++   LI  LP +    +   L + L
Sbjct: 146 GLQSANDRTLKKINRGHDFAAYEDTVKRARRLGIKVCTHLILGLPGEGHEDYLETLDKVL 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +  VD L L+ L I +G+   K  ++  + L                T    +    ++ 
Sbjct: 206 AVGVDGLKLHPLHIVEGSTMAKAWRNNKMSLLELETYAYSVGELIRWTPKEVIFH-RVTA 264

Query: 256 HSFLGA 261
           ++    
Sbjct: 265 YAKKPM 270


>gi|161528087|ref|YP_001581913.1| ELP3 family histone acetyltransferase [Nitrosopumilus maritimus
           SCM1]
 gi|160339388|gb|ABX12475.1| histone acetyltransferase, ELP3 family [Nitrosopumilus maritimus
           SCM1]
          Length = 527

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 83/241 (34%), Gaps = 34/241 (14%)

Query: 28  CVK-KCPYCD----FNS---HVRRYK----VGQENFIQSF--LTEMQWMRQLTGPRSISS 73
           C   +C YC     FNS   +           +  +       T++  +       S   
Sbjct: 91  CPHGRCTYCPGGIEFNSPNSYTGNEPSTLNAIENEYDPKLQITTKIDKLIAFGHDPSKME 150

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSS-----------------NVEITIEANPSS 116
           I   GGT   +        +         +                  NV  TIE  P  
Sbjct: 151 IVIVGGTFLFMPRDYQENFIKSCYDALNGTDSKNLEEAKSNNEHASIRNVGFTIETKPDF 210

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
            +  +       GV RI +GVQSL+E+    + R HN ++ + +  ++++   ++   ++
Sbjct: 211 CKKEHVDWMLDYGVTRIEIGVQSLQERVYNIINRGHNYNDVVESFQISKDAGYKLVAHMM 270

Query: 177 YALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             LP  T      + ++  S      D L +Y   + + T  Y+ +KDG     S+   +
Sbjct: 271 PGLPTMTPEGDIADFKKLFSDSQLRPDMLKIYPSLVIENTPMYQEYKDGKYTPYSDEDMI 330

Query: 234 D 234
            
Sbjct: 331 Q 331


>gi|163751959|ref|ZP_02159171.1| hypothetical protein KT99_01389 [Shewanella benthica KT99]
 gi|161328175|gb|EDP99341.1| hypothetical protein KT99_01389 [Shewanella benthica KT99]
          Length = 308

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 20/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC  N     ++ G E  IQ    +++  R+    RS   I +   
Sbjct: 33  CPNRDGTLGKGGCTYC--NVASFSFEHGTELSIQ---EQLKLGRERAKGRSSKYIAYFQA 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
             S        ++     +  + +  V + +   P  V              G+     L
Sbjct: 88  YTS--TYDEYRVLKAKYDEAISDADIVGLCVGTRPDCVSDEVIDLLLSYQNQGIEVWLEL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L+ + R H  ++    +  AR    ++   LI  LP ++   +   L+  L
Sbjct: 146 GLQSANDKTLKRINRGHTYNDYRDTVLRARAKGLKVCTHLILGLPGESHQDYLSSLEAVL 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  VD L L+ L I +G+   K  ++  + L + +            T  + +    ++ 
Sbjct: 206 STGVDGLKLHPLHIVEGSTMAKAWRNDRMSLLTIDEYAYSVGELIRYTPKNIIFH-RVTA 264

Query: 256 HSF 258
           ++ 
Sbjct: 265 YAK 267


>gi|39995693|ref|NP_951644.1| radical SAM family protein [Geobacter sulfurreducens PCA]
 gi|39982457|gb|AAR33917.1| radical SAM protein, TIGR01212 family [Geobacter sulfurreducens
           PCA]
 gi|298504704|gb|ADI83427.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
           TIGR01212 family [Geobacter sulfurreducens KN400]
          Length = 319

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 7/196 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  S      V  ++        M + RQ  G      I+F   T +      +  
Sbjct: 50  CIYCDNASFSPGGTVPDKSIELQMAEGMAYHRQRLGSEKFI-IYFQKFTNTYAPAARLRD 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +      +  V   V I++   P ++     +            I LG+QS+++  L  +
Sbjct: 109 LYTRALSHPDV---VGISVGTRPDALADEALELLADLAQEHYVCIELGLQSMDDAILERI 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E +  +         +   LIY  P +T   +           VD + L+QL 
Sbjct: 166 NRGHTLDEYLRTVDRIAGRGIALCTHLIYGFPGETREGFLKTAHLLAGLPVDSVKLHQLH 225

Query: 209 IEKGTLFYKMHKDGDL 224
             KGT   +++   + 
Sbjct: 226 AVKGTRLAELYHRREF 241


>gi|254442954|ref|ZP_05056430.1| radical SAM protein, TIGR01212 family [Verrucomicrobiae bacterium
           DG1235]
 gi|198257262|gb|EDY81570.1| radical SAM protein, TIGR01212 family [Verrucomicrobiae bacterium
           DG1235]
          Length = 321

 Score = 94.6 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 6/208 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C YC+ +S   +        + +  +  M+  R+  G      ++F   T +  +   + 
Sbjct: 60  CSYCNVDSFTPKENRRSLASVREQVIEGMERARRKYGAEKFM-VYFQPNTNTYSDVDTLE 118

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK---AGVNRISLGVQSLEEQSLRF 147
            I             V +TI   P  ++    +  ++        I  G++S+ +  L  
Sbjct: 119 RIYSQAVDAAP-GEVVGLTIGTRPDCIDREKLEMLKRRFGHLYVSIEYGLESMRDDVLAG 177

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R     E +AA+ L       +    I+ LP +    W           + H+ L+ L
Sbjct: 178 INRGTTHEEFVAAVELTAEYGFEVCAHTIFGLPGEAEGDWLAVADELNRLPIRHVKLHHL 237

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            + KG++  K ++D    L +       
Sbjct: 238 HVVKGSILAKRYRDEPFELFTLESYASF 265


>gi|148265681|ref|YP_001232387.1| putative radical SAM protein [Geobacter uraniireducens Rf4]
 gi|146399181|gb|ABQ27814.1| conserved hypothetical radical SAM protein [Geobacter
           uraniireducens Rf4]
          Length = 319

 Score = 94.6 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 74/205 (36%), Gaps = 17/205 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C YCD NS         E  I++     M + R          I+F  
Sbjct: 38  CPNRDGARGVGGCIYCD-NSSFSPGGTVAEIPIETQMSEGMAYHRTRLKSEKFI-IYFQK 95

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISL 135
            T +    + +  +      +  V   + I++   P ++     Q       N    + L
Sbjct: 96  FTNTYAPVEKLRDLYSRALAHPDV---LGISVGTRPDAISDEAIQLLAGLARNHYVCVEL 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS+++  L+ + R H  SE +  ++        +   LIY  P +T   +        
Sbjct: 153 GLQSMDDAILKQINRGHTLSEYLNTVNRIAGRGIDICTHLIYGFPGETHAGFLKTADLIA 212

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
           S  V+ L ++QL   +GT    ++ 
Sbjct: 213 SLPVNSLKIHQLHAVRGTRLADLYH 237


>gi|149030304|gb|EDL85360.1| rCG52086, isoform CRA_b [Rattus norvegicus]
          Length = 525

 Score = 94.6 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 79/417 (18%), Positives = 143/417 (34%), Gaps = 83/417 (19%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAIKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            S +  +    L   I +        Y +     +   S                    S
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVS--------------------S 376

Query: 285 RVKVGSHR-VAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGIS 342
            V  G+ R +A +  K     +++VR++  A    E FLS E    + L+  LRLR+  S
Sbjct: 377 GVDHGNLRELAFARMKDLGIQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRK-CS 435

Query: 343 VKDWEMLAGRNLDIECERN---------------LQRQGF--IERVQFSRLRCTQRG 382
            + +    G  + I  E +                Q QGF  +   +  R+   + G
Sbjct: 436 EETFRFELGGGVSIVRELHVYGSVVPVSSRDPTKFQHQGFGMLLMEEAERIALEEHG 492


>gi|269469069|gb|EEZ80624.1| Fe-S oxidoreductase [uncultured SUP05 cluster bacterium]
          Length = 303

 Score = 94.6 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 79/218 (36%), Gaps = 23/218 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
           C  +        C +C+  +     +          L ++Q  R++   R        +F
Sbjct: 32  CPNRDGSKGIGGCTFCNNVTFSPNGRAP-----DPILEQIQNGREVLIKRTGAKKYIAYF 86

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +  + + ++ + +           + ++I   P  V              G +  
Sbjct: 87  QAYTNTYSDIETLSKMYETALSE---DDIIGLSIGTRPDCVPDEVIDLLVDYQNKGFDIW 143

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+QS  +++L+ + R H   E    +  AR    R+   LI  LP +  T ++  LQ
Sbjct: 144 LELGLQSAFDKTLKRINRGHGFEEYRQTLLAARGKGLRVCTHLIIGLPGENETHFKATLQ 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           R L+  VD L  + L + KGT      + G+    +  
Sbjct: 204 RVLNLGVDGLKFHPLHVVKGTQLANDWRRGEYRPMTME 241


>gi|218886657|ref|YP_002435978.1| radical SAM protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757611|gb|ACL08510.1| Radical SAM domain protein [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 401

 Score = 94.6 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 38/233 (16%)

Query: 26  PF--CVKKCPYCDFNSHVRRYK---------VGQENFIQSFLTEMQWMR----------- 63
           PF  C  +C +C  +    +              E  ++     ++ +            
Sbjct: 46  PFAGCPTRCVFCAQDVQTGQRGGINSVGHALAVAEARLEHEARLLEAVAVNSDQETRDHP 105

Query: 64  ---------QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                          S   I F GGT +L+     A  L+  A+         +     P
Sbjct: 106 APNAGRVASAHEASPSPLEIAFYGGTFTLLSEAERAACLELAARWRQRGVVCRVRCSTRP 165

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD 174
            +V  +     R AG++ + LGVQS ++ +L    R +  + A AA  +       +   
Sbjct: 166 DAVTEHGLTTLRAAGMDCVELGVQSFDDAALVAASRGYGGALARAACAMVAGAGLELGVQ 225

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDH-------LSLYQLTIEKGTLFYKMHK 220
           L+  +P  T   +  +++ AL    D        L  Y   + +GT   +  +
Sbjct: 226 LMPGMPGVTPEVFRTDVRTALLPDTDGAAPLTSFLRFYPCLVLRGTPLAERWR 278


>gi|294056057|ref|YP_003549715.1| hypothetical protein Caka_2529 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615390|gb|ADE55545.1| conserved hypothetical protein [Coraliomargarita akajimensis DSM
           45221]
          Length = 314

 Score = 94.6 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  S    Y   Q+   Q     +++             +F   + +    + +  
Sbjct: 48  CTFCDNESFNPSYCDPQKPVAQQIDEGIRFHSHRYKRAGEYLAYFQAYSNTHAPLRQLRE 107

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAGVNRISLGVQSLEEQSLRFL 148
           I D       V   V + I   P  ++       Q   +     + +G++S  +Q+L+ +
Sbjct: 108 IYDQALAVPNV---VGLVIGTRPDCLDAEKLKYFQELAQQHYVILEIGIESCYDQTLKRI 164

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R HN  +A+ AIHL      ++   +I+ LP ++      E        ++ +  +QL 
Sbjct: 165 NRGHNYQQAVDAIHLTAAHDIKVGTHMIFGLPGESEDMLLDEAAMLSQLPLNTIKFHQLQ 224

Query: 209 IEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSI 242
           + KGT     +K H +  +     +    +    + +
Sbjct: 225 LIKGTPMVNDFKKHPNDFIFWELNDYLELMVRFIEKL 261


>gi|37521804|ref|NP_925181.1| hypothetical protein glr2235 [Gloeobacter violaceus PCC 7421]
 gi|35212802|dbj|BAC90176.1| glr2235 [Gloeobacter violaceus PCC 7421]
          Length = 326

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +CD +    +         +     M   ++  G ++   I +   
Sbjct: 45  CPNRDGTRARGGCTFCDASGSSAQVSPPATPLDEQLRLGMAGWQRKFGEKARKFIAYYQA 104

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
             +      +  + +           + I I   P  V     +   +    +   +  G
Sbjct: 105 FTN--THAPVDRLREVYRAGMEHPDCIGIAIGTRPDCVGEPVLELLAEMASRKYLWVEYG 162

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS  +Q+L  + R H  +E + A+   R     +   LI+ LP  T       +    S
Sbjct: 163 LQSAHDQTLARINRAHTVAEFVDAVRRTRGRGIEVCAHLIHGLPGDTPAMMLQSVDLLAS 222

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             V+ + ++ L I KG++    +  G++ L S    V     +           
Sbjct: 223 LGVEGVKIHSLHIVKGSVMAGQYLRGEIPLMSRTEYVQWVCDSLERLPWQIKIH 276


>gi|220903466|ref|YP_002478778.1| Radical SAM domain-containing protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867765|gb|ACL48100.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 401

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 4/185 (2%)

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
             R+ T     + + F GGT + +   + A  LD                   P  V   
Sbjct: 105 LERRHTLGLPPAELAFYGGTFTAMPDGDQAACLDLAGLALERGWIRSFRCSTRPDCVTAP 164

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
             +  R AG   + LGVQS  + +L    R ++ + A+ A    ++    +   L+  +P
Sbjct: 165 VLERLRAAGCRCVELGVQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMP 224

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS----ENVAVDLY 236
                 +  ++ +AL    D L  Y   + +GT   +M + G           ++    +
Sbjct: 225 GHAPADFLADVPQALRAGADMLRFYPCLVLEGTALARMWRQGTYSPWPLEATLDLLAQGW 284

Query: 237 NLTQS 241
            + Q+
Sbjct: 285 LMAQA 289


>gi|71406538|ref|XP_805799.1| histone acethyltransferase-like protein [Trypanosoma cruzi strain
           CL Brener]
 gi|70869346|gb|EAN83948.1| histone acethyltransferase-like protein, putative [Trypanosoma
           cruzi]
          Length = 678

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 3/161 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + L+ + +     +   + +T+E  P ++     Q  R+ G  R+ LGVQ  ++  L  +
Sbjct: 256 MDLLQEQMLNETALCKIIGVTLETRPDTINEEMLQQLRRFGCTRVQLGVQHTDDAVLLAV 315

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLY 205
            R     EAI AI L ++   ++   L+  LP  T    +    ++  +     D   +Y
Sbjct: 316 NRQSTREEAIRAIKLLKDSCFKVDIHLMPDLPGSTPEGDKAMFDDVLYSADLQADQWKIY 375

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  T+  +  K+G       +  VD+    +      
Sbjct: 376 PCQTTPFTVIEQWFKEGKYQPYGLDNLVDVILHAKRRVQPW 416


>gi|20071431|gb|AAH26461.1| Elp3 protein [Mus musculus]
          Length = 468

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 134/371 (36%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 22  HISFTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 80

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              + +  V IT
Sbjct: 81  HSVDKVEFIVMGGTFMALPEEYRDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGIT 140

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H    A  + HLA++   
Sbjct: 141 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACESFHLAKDSGF 200

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 201 KVVTHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 260

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  +    L   I +        Y +          S +   +L  L + R  D +G
Sbjct: 261 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELAFARMKD-LG 316

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 317 IQCRDVRTREVGIQEIHHRVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 373

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 374 LRK-CSEETFR 383


>gi|291287639|ref|YP_003504455.1| hypothetical protein Dacet_1735 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884799|gb|ADD68499.1| conserved hypothetical protein [Denitrovibrio acetiphilus DSM
           12809]
          Length = 297

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 85/242 (35%), Gaps = 22/242 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C YC     V  +   +E  I +     ++ +++    + I  I+F  
Sbjct: 30  CPNRDGHAGIGGCIYCS----VDSFDGAEEGTIAEQVAERIEKLKRRGINKYI--IYFQS 83

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISL 135
            + +    + I    + +         V + I   P  ++    +  ++        +  
Sbjct: 84  YSNTYGTVETIR---ERVNCALVDDGIVAVHIGTRPDVIDREKLEYLQELNATYEVVVEY 140

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  + +L  + R H   +   A+ L      ++   +I+ LP  +       ++   
Sbjct: 141 GLQSANDVTLAKVNRGHTVQDFKDAVALTHEYGLKVCAHVIFGLPGDSRQDMISSVRMLT 200

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V  +  + L + KGT+  KM   GD  + S    +D+ +          + A  IS 
Sbjct: 201 ELGVYSVKFHHLHVVKGTVLEKMFLAGDADVMSLEEYIDVLSEAMGYLDNSIVVA-RISG 259

Query: 256 HS 257
            +
Sbjct: 260 DA 261


>gi|116754208|ref|YP_843326.1| ELP3 family histone acetyltransferase [Methanosaeta thermophila PT]
 gi|116665659|gb|ABK14686.1| histone acetyltransferase, ELP3 family [Methanosaeta thermophila
           PT]
          Length = 512

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 6/169 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P     N+ +     G  ++ LGVQS+ +  L  + R H+  E I A  L 
Sbjct: 200 NVGITFETRPDWCRENHIKNMLLLGATKVELGVQSIYDDVLSAIRRGHSVEETIRANRLL 259

Query: 165 RNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R    ++ F ++  LP     +      EL  + +Y  D+L +Y   + +GT  ++M   
Sbjct: 260 REAGLKVGFHMMPGLPGSDPDRDLKMFRELFESSNYRPDYLKIYPTLVIEGTELHRMWIR 319

Query: 222 GDLVLPSENVAVDLYNLTQSIT---SAHGLHAYEISNHSFLGAESLHNL 267
           GD    S++ A +L +  + I    +       +I  H         NL
Sbjct: 320 GDYEPLSDDEAAELISRIKEILPRYTRLQRVQRDIPAHLITAGVRKSNL 368


>gi|261417376|ref|YP_003251059.1| hypothetical protein Fisuc_2997 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373832|gb|ACX76577.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302328091|gb|ADL27292.1| radical SAM protein, TIGR01212 family [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 295

 Score = 94.2 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    +   + +  +     +  +R       I   +    T +    +++  
Sbjct: 45  CSYCNNRSFSPVFDEAKVSIQEQLKKYIPKLRDKYPNAGI-LAYLQPYTNTHAPLEHLRE 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I+D I K+  ++    + I   P  +E    +   +    +   + +G+Q+  + +L  +
Sbjct: 104 IIDPIIKHKEIAG---LAIGTRPDCLEDEKIEYLAELNHKKPIIVEIGLQTANDLTLAGI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E   A+   +     ++  +I  LP + M  ++   Q      +  + ++ L 
Sbjct: 161 NRRHTLAEFEDAVKRCQAAGLTVTTHVIVGLPGEKMEDFKHTAQVVHDLKLAAVKIHPLH 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           I  GT+  + + +G++ L S   
Sbjct: 221 IVVGTVMAQDYANGEVKLLSFEE 243


>gi|119773995|ref|YP_926735.1| hypothetical protein Sama_0858 [Shewanella amazonensis SB2B]
 gi|119766495|gb|ABL99065.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 317

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 99/283 (34%), Gaps = 39/283 (13%)

Query: 28  CVKK--------CPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C    FN+        Q +       +M          ++  I+F
Sbjct: 41  CPNRDGSLGIGGCTFCHVPSFNA----DDGQQFDIPSQLKRQMA-----GRTDALYFIYF 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +  E   +    D       V+      +   P  V              G++  
Sbjct: 92  QAYTSTYDEVAVLKRRYDEALSIGNVAGLF---VGTRPDCVPDAVLHLLADYQQQGIDVW 148

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  + +L+ + R H+ +    A+  AR +  ++   LI  LP +T   +    +
Sbjct: 149 LDLGLQTARDDTLKRINRGHDFAIYADAVTRARRLGIKVCTHLILGLPGETSEDFVESHR 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAY 251
           + L+  VD L L+ L I +G++  +  + G L  L  ++       L Q   +   LH  
Sbjct: 209 QVLALGVDGLKLHPLHIVEGSIMARQWRAGRLDTLSLDDYVNAAVRLIQRTPADIILHR- 267

Query: 252 EISNHSFLG---AESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
            ++ H+      A        W    ++G+G    S  + G  
Sbjct: 268 -VTAHARPPLLLAPD------WCGHKWLGMGAICSSLARTGGQ 303


>gi|71655565|ref|XP_816344.1| histone acethyltransferase-like protein [Trypanosoma cruzi strain
           CL Brener]
 gi|70881465|gb|EAN94493.1| histone acethyltransferase-like protein, putative [Trypanosoma
           cruzi]
          Length = 678

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 62/161 (38%), Gaps = 3/161 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + L+ + +     +   + +T+E  P ++     Q  R+ G  R+ LGVQ  ++  L  +
Sbjct: 256 MDLLQEQMLNETALCKIIGVTLETRPDTINEEMLQQLRRFGCTRVQLGVQHTDDAVLLAV 315

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLY 205
            R     EA+ AI L ++   ++   L+  LP  T    +    ++  +     D   +Y
Sbjct: 316 NRQSTREEAVRAIKLLKDSCFKVDIHLMPDLPGSTPEGDKAMFDDVLYSADLQADQWKIY 375

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  T+  +  K+G       +  +++    +      
Sbjct: 376 PCQTTPFTVIEQWFKEGKYQPYGLDNLIEVILHAKRRVQPW 416


>gi|146282320|ref|YP_001172473.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
 gi|145570525|gb|ABP79631.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri A1501]
          Length = 442

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 64/415 (15%), Positives = 133/415 (32%), Gaps = 50/415 (12%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +  L A   +  G     L + +H P                        ++Q    E++
Sbjct: 38  LDLLRALRESRRG--GRPLSLSIHQP------------DGAGLQPEAAAAYLQRLEREIE 83

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +    GP +++  +    GT   +  + +  +L+ + + +            E   + V
Sbjct: 84  QLGCHAGPLQAVEQLRLSVGT---LGIEALRRLLNQLKRRFAFVEPHAGSFLAEVELAHV 140

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLI 176
           +        + G N++S+ V  L       +    +++   A I  A  +  R ++ DL 
Sbjct: 141 DWPLIGALHELGFNQLSVAVPDLRADDGGTVEYFRSSARIRAVIEAAHALHYRSVNLDLG 200

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y    QT + +  +L   +  A D ++++           +      L L S    + +Y
Sbjct: 201 YGRSWQTPSSFARKLASIIELAPDQITMFDYRDAVPAGVGR------LGLASPADTLAMY 254

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE--------SLHN--LNYWRYGDY--IGIGPGAHS 284
                  SA G     +        +        +LH+    Y  +GD   +G G GA S
Sbjct: 255 RHGVEQLSAAGYRYIGLGKFVLPHDDLAMAQEIGALHHDLCGYSLHGDCDHLGFGVGAVS 314

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           RV     + A  +     ++ + + +     V     +        L+  L     +   
Sbjct: 315 RVGGLFCQNADRVP----AYQRALDQGQLPCVRGLHANHIDPLHRLLLERLLCTFALDFD 370

Query: 345 DWEMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              + +G ++           R L   G I       LR   +   ++ +V A  
Sbjct: 371 ALSLQSGVDVRQRYAQHWPALRQLHADGVIVLDDSG-LRVPAQARLLVAAVCAAF 424


>gi|254169040|ref|ZP_04875878.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|197622010|gb|EDY34587.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
          Length = 514

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 43/246 (17%)

Query: 26  PF-CVK-KCPYC-------DFNSHVRRYKVG--QENF----IQSFLTEMQWMRQLTGPRS 70
           PF C   KC YC          S+            +     +     ++ +R +  P  
Sbjct: 79  PFPCPHGKCIYCPGGPEKGTAQSYTGHEPAALRAAQYNFDPYEQTKARIEQLRAIGHPTD 138

Query: 71  ISSIFFGGGTPSL-------------------IEPQNIAL--ILDGIAKNWTVSSNVEIT 109
              +   GGT +                    ++ +N+    +++  AKN      + +T
Sbjct: 139 KIDLIIMGGTFTARPKSYQEWFVKRAFDAMNGMDAKNLEEAQLINEDAKNR----CIGLT 194

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +E  P            K G  R+ LG+Q++ +  L  + R H   E+I A  LA++   
Sbjct: 195 VETRPDWFMEKEIDFALKLGATRVELGIQTVYDDILEKVKRGHTIRESILATRLAKDAGF 254

Query: 170 RMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++++ ++  LP  ++        E+    ++  D L +Y   + KGT  Y+M K G+   
Sbjct: 255 KINYHMMPGLPGSSLERDYMAFKEIFENPNFRPDMLKIYPTLVVKGTELYEMWKKGEYEP 314

Query: 227 PSENVA 232
            +    
Sbjct: 315 YALEEM 320


>gi|20094488|ref|NP_614335.1| RNA polymerase II complex ELP3 subunit [Methanopyrus kandleri AV19]
 gi|19887590|gb|AAM02265.1| ELP3 component of the RNA polymerase II complex, consists of an
           N-terminal BioB/LipA-like domain and a C-terminal
           histone acetylase domain [Methanopyrus kandleri AV19]
          Length = 549

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 129/382 (33%), Gaps = 55/382 (14%)

Query: 28  CVK-KCPYCDFN---------SHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGP 68
           C   +C YC            S+  +   G+            +++ + +++        
Sbjct: 106 CPHGRCAYC--PGGPEKGVPQSYTGKEPAGRRAKEHEFHPRKQVEARIRQLEISGH--PT 161

Query: 69  RSISSIFFGGGTP-SLIEPQNIA-------------LILDGIAKNWTVSSN--VEITIEA 112
             I  I  GG  P + +  Q                L ++   K    S    V IT E 
Sbjct: 162 DKIELIVMGGTFPATPLCYQEWFVRECLNAMTGKDALTIEEAQKYAETSERRPVGITFET 221

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P   +  +     K G  R+ +GVQ++ +  L+ + R H   + + A  + ++   ++ 
Sbjct: 222 RPDYCKEEHVDHMLKLGATRVEVGVQTIYDFILKRVDRGHTVKDTVEATRILKDAGLKVC 281

Query: 173 FDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           + ++  LP     +    L+R      +  D L +Y   + + T  Y   K G+     E
Sbjct: 282 YHIMPGLPGSNPERDLRMLKRLFKDPRFKPDMLKIYPCMVFEDTPLYDAWKRGEYEPYDE 341

Query: 230 NVAVDLYNLTQSI----TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI---GIGPGA 282
             AV +    +               +I  H         NL      DY+   G     
Sbjct: 342 ETAVKVIAEAKHRYVPEYCRIMRVQRDIPAHLAAAGIRKTNLR-QLVHDYLEEKGWECRC 400

Query: 283 HSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
             R +   HR+   +E  P  + L+++++         FL+ E    + ++  LRLR+  
Sbjct: 401 I-RCREAGHRMRQGVEVDPGRAELRIIKERTWKGGMDYFLAYEDPEADAILGYLRLRKPT 459

Query: 342 SVKDWEMLAGRNLDIECERNLQ 363
            +         + +    R L+
Sbjct: 460 ELAH---RPEIDPETAIVRELK 478


>gi|327480570|gb|AEA83880.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           stutzeri DSM 4166]
          Length = 442

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 64/415 (15%), Positives = 132/415 (31%), Gaps = 50/415 (12%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +  L A   +  G     L + +H P                        ++Q    E++
Sbjct: 38  LDLLRALRESRRG--GRPLSLSIHQP------------DGAGLQPEAAAAYLQRLEREIE 83

Query: 61  WMRQLTGP-RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSV 117
            +    GP +++  +    GT   +  + +  +L  + + +            E   + V
Sbjct: 84  QLGCHAGPLQAVEQLRLSVGT---LGIEALRRLLSQLKRRFAFVEPHAGSFLAEVELAHV 140

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLI 176
           +        + G N++S+ V  L       +    +++   A I  A  +  R ++ DL 
Sbjct: 141 DWPLIGALHELGFNQLSVAVPDLRADDGGTVEYFRSSARIRAVIEAAHALHYRSVNLDLG 200

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           Y    QT + +  +L   +  A D ++++           +      L L S    + +Y
Sbjct: 201 YGRSWQTPSSFARKLASIIELAPDQVTMFDYRDAVPAAVGR------LGLASPADTLAMY 254

Query: 237 NLTQSITSAHGLHAYEISNHSFLGAE--------SLHN--LNYWRYGDY--IGIGPGAHS 284
                  SA G     +        +        +LH+    Y  +GD   +G G GA S
Sbjct: 255 RHGVEQLSAAGYRYIGLGKFVLPHDDLAMAQEIGALHHDFCGYSLHGDCDHLGFGVGAVS 314

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVK 344
           RV     + A  +     ++ + + +     V     +        L+  L     +   
Sbjct: 315 RVGGLFCQNADRVP----AYQRALDQGQLPCVRGLHANHIDPLHRLLLERLLCTFALDFD 370

Query: 345 DWEMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
              + +G ++           R L   G I       LR   +   ++ +V A  
Sbjct: 371 ALSLQSGVDVRQRYAQHWPALRQLHADGVIVLDDSG-LRVPAQARLLVAAVCAAF 424


>gi|253699307|ref|YP_003020496.1| hypothetical protein GM21_0664 [Geobacter sp. M21]
 gi|251774157|gb|ACT16738.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 318

 Score = 93.8 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 15/204 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YCD +S   +  V      +     M + R     +    ++F   
Sbjct: 38  CPNRDGSRGTGGCIYCDNSSFSPKETVSVIPIEEQMAAGMAYHRARLASQKFI-VYFQKF 96

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +  +      +  V   V I++   P S++ +      +   +R   + LG
Sbjct: 97  TNTYAPVEKLDDLYRRALSHPDV---VGISVGTRPDSIDDDAVALLTELARDRYVCVELG 153

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+++  L  + R H+ +E ++A+         +   LIY  P +  + +    +   S
Sbjct: 154 LQSIDDAILTRINRGHSFAEYLSAVDRLAGRGIDICTHLIYGFPGEKRSGFVKGARLISS 213

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             V  + L+QL   +GT   +M++
Sbjct: 214 LPVTSVKLHQLHAVEGTKLAQMYR 237


>gi|127511966|ref|YP_001093163.1| putative radical SAM protein [Shewanella loihica PV-4]
 gi|126637261|gb|ABO22904.1| conserved hypothetical radical SAM protein [Shewanella loihica
           PV-4]
          Length = 330

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 83/246 (33%), Gaps = 20/246 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  N     ++ G    I S   ++   R+    +S   I +   
Sbjct: 52  CPNRDGTLGRGGCTFC--NVASFSHEHGS---IDSIAVQLANGRERAQGKSSKFIAYFQA 106

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS----L 135
             S  +   +  +     +    S  V + +   P  V               +     L
Sbjct: 107 YTSTYDEYQL--LKQRYDEAVADSDIVGLCVGTRPDCVSDEVIALLAGYQARGLEVWLEL 164

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   ++L+ + R H   E    +  AR    ++   LI  LP ++   +    +  L
Sbjct: 165 GLQSANLETLKRINRGHGFEEYRDTVIRARKAGLKVCTHLILGLPGESHEDFLASHRAVL 224

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VD L ++ L I +G+   K  + G + L ++    +       +T    +    ++ 
Sbjct: 225 DAGVDGLKIHPLHIVEGSTMAKAWRAGRMSLLTQEAYAESVGELIRLTPKEVIFH-RVTA 283

Query: 256 HSFLGA 261
           ++    
Sbjct: 284 YAKKPM 289


>gi|197335171|ref|YP_002156923.1| radical SAM protein, family [Vibrio fischeri MJ11]
 gi|197316661|gb|ACH66108.1| radical SAM protein, family [Vibrio fischeri MJ11]
          Length = 313

 Score = 93.4 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+    V  +   QE F +S   ++               +F   
Sbjct: 33  CPNRDGTIGKGGCTFCN----VASFADEQEQF-KSIHDQLTDRAGEVQRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  + +   K   +   V + +   P  V        +     G      L
Sbjct: 88  TSTFAEVQVLKNMYEEALKAANI---VGLCVGTRPDCVPDAVLDLLKGYVDDGYEVWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +   A    AR++  ++   LI  LP  T       L + L
Sbjct: 145 GLQTANDKTLKRINRGHDFACYDAITRKARSLGIKVCTHLIIGLPGDTRDDNRQTLDKVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  + G L  P  +  VD+      +T    ++   +S 
Sbjct: 205 ATGTDGIKLHPLHIVEGSTMAKAWRAGKLNAPEMDEYVDIACELIRLTPPEVVYH-RVSA 263

Query: 256 HSF 258
            + 
Sbjct: 264 TAR 266


>gi|330809473|ref|YP_004353935.1| coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377581|gb|AEA68931.1| Putative Coproporphyrinogen dehydrogenase (oxygen-independent
           coproporphyrinogen III oxidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 457

 Score = 93.1 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 53/344 (15%), Positives = 106/344 (30%), Gaps = 30/344 (8%)

Query: 48  QENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS--S 104
            E ++Q    E+  +   L   R +      GGTP +    ++  ++  + K +  S   
Sbjct: 81  IEGYLQRLTYELGLVGCHLGAGRRVEQFCLTGGTPVI---AHLQKLMSDLRKRFDFSEYD 137

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
             + +IE +    + +     R  G   +S+GV  +   S   +    N +   + I  A
Sbjct: 138 GGDHSIEVDLHHTDWSTMGLIRDQGFTHVSIGVPDIGVDSDLSVDCYQNPAPIHSLIDAA 197

Query: 165 R-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           R   F  ++ DL Y    QT + + ++L   +    D L  +           K      
Sbjct: 198 RTFGFRSINIDLGYGHAWQTPSSFALKLATLIELEPDRLHAFDYARAPYRYRSKNAGLAG 257

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG--------AESLHN--LNYWRYG 273
                 +    +  +        G H   +                  LH     + R+G
Sbjct: 258 DFCSPADKDA-MRRICCEQLIGAGYHYIGLGQFVRADDDLAVAQEHGRLHRNCQGFTRHG 316

Query: 274 --DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
             D++G G  A ++++     + +        + + +      V       ++ Q    +
Sbjct: 317 CCDHVGFGLSAITQIE----HLYVQNTDDLHQYCQQLDAGQLPVHRGWRCEAQDQVKACV 372

Query: 332 MMGLRLREGISVKDWEMLAGRNLDIEC------ERNLQRQGFIE 369
              L     + +   E   G                L  QG IE
Sbjct: 373 TEQLSCDLELDIPAIEARFGLVFREYFASLWPSLEALHDQGLIE 416


>gi|322826311|gb|EFZ30987.1| histone acethyltransferase-like protein, putative [Trypanosoma
           cruzi]
          Length = 678

 Score = 93.1 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 3/161 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + L+ + +     +   + +T+E  P ++     Q  R+ G  R+ LGVQ  ++  L  +
Sbjct: 256 MDLLQEQMLNETALCKIIGVTLETRPDTINEEMLQQLRRFGCTRVQLGVQHTDDAVLLAV 315

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLY 205
            R     EA+ AI L ++   ++   L+  LP  T    +    ++  +     D   +Y
Sbjct: 316 NRQSTREEAVHAIKLLKDSCFKVDIHLMPDLPGSTPEGDKAMFDDVLYSADLQADQWKIY 375

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  T+  +  K+G       +  +D+    +      
Sbjct: 376 PCQTTPFTVIEQWFKEGKYQPYGLDNLIDVILHAKRRVQPW 416


>gi|315425164|dbj|BAJ46834.1| RNA polymerase II complex ELP3 subunit [Candidatus Caldiarchaeum
           subterraneum]
 gi|315426672|dbj|BAJ48298.1| elongator complex protein 3 [Candidatus Caldiarchaeum subterraneum]
          Length = 499

 Score = 93.1 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 90/275 (32%), Gaps = 53/275 (19%)

Query: 7   YENNMTGQGSNSLG----------VYVHWPFCVK-KCPYC----------------DFNS 39
            ++N+T + + +L           +Y     C   KC YC                    
Sbjct: 39  LKSNITRKPAKTLSGVSVITIVAPLYT----CPHGKCIYCPGGAPLGTPQSYTGEEAAVK 94

Query: 40  HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN 99
              +        +++ +  ++ M        +  I  GG   +        +I + +   
Sbjct: 95  TAAQLGYDPRKQVEAAVNRLRHMGHRVD--KVELIIIGGTFTASPPEFQRWMIKECVDAL 152

Query: 100 WTVSSNV----------------EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             V+S+                  IT+E  P   +        + GV R+ +GVQ+L+++
Sbjct: 153 NGVASSSLEEALRINTSSAIHVSGITVETKPDWAKREKAVQLVEYGVTRVEIGVQALDDK 212

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVD 200
            L  L R H+  + + A    ++   ++ + ++  LP  T  +       L     +  D
Sbjct: 213 ILTTLNRGHSVEDVVEATADLKDTAFKVCYHIMPNLPGSTPHKDLNMFTTLFDDDRFRPD 272

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L +Y   +  GT    M     L  P  +  +  
Sbjct: 273 QLKIYPTLVLPGTGLETM-WRHGLYKPYSDDELVY 306


>gi|242399782|ref|YP_002995207.1| Histone acetyltransferase Elp3 like protein [Thermococcus sibiricus
           MM 739]
 gi|242266176|gb|ACS90858.1| Histone acetyltransferase Elp3 like protein [Thermococcus sibiricus
           MM 739]
          Length = 593

 Score = 93.1 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P            K G  R+ LGVQ++       + R H   + + A  L +
Sbjct: 240 VGLTIETRPDWAMEKQIDRMLKLGTTRVELGVQTVFNFIYERVKRGHTVEDTLRATQLLK 299

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     Q       +  D L +Y   + K T+ Y+ +K+G
Sbjct: 300 DAGLKINYHMMPGLPGSNFERDLKAFQIIFEDERFRPDMLKVYPTLVTKDTILYRWYKEG 359

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   AV+L      +            +I            NL    + + +  G
Sbjct: 360 KYRPYTTEEAVELLVEVYKMLPKWVRVMRIQRDIPVQLVEAGVKHSNLGQLVFNELVRRG 419

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG       IE   E  +K++R++  A    E FLS E   ++ L+  +R
Sbjct: 420 IRPREIRFREVGHQMQKFGIEPEVEH-IKLLREDYEASEGHEIFLSFEDVKNDILIGFIR 478

Query: 337 LR 338
           LR
Sbjct: 479 LR 480


>gi|315231475|ref|YP_004071911.1| histone acetyltransferase [Thermococcus barophilus MP]
 gi|315184503|gb|ADT84688.1| histone acetyltransferase [Thermococcus barophilus MP]
          Length = 589

 Score = 93.1 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  R+ LGVQ++       + R H   + + A  L +
Sbjct: 237 VGLTIETRPDWSFERHIDRMLAFGTTRVELGVQTVFNFIYERVKRGHTVEDVVRATQLLK 296

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     Q       +  D L +Y   + + T+ YK +K+G
Sbjct: 297 DAGLKVNYHMMPGLPGSNFERDLKAFQIIFEDSRFKPDMLKIYPTLVTEDTILYKWYKEG 356

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   AV L      I            +I            NL    + + I  G
Sbjct: 357 KYRPYTTEEAVRLLVEVYKIIPKWVRVMRIQRDIPVPLIAAGVKHSNLGQLVFNELIREG 416

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG       I+   E  +K++R++  A   +E FLS E   ++ L+  LR
Sbjct: 417 IRPREIRFREVGHVMQKFGIQPEVEH-IKLLREDYEASEGREIFLSFEDVKNDILIGFLR 475

Query: 337 LR 338
           LR
Sbjct: 476 LR 477


>gi|299115984|emb|CBN75985.1| ELP3 like acetyltransferase involved in transcription [Ectocarpus
           siliculosus]
          Length = 605

 Score = 93.1 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 15/211 (7%)

Query: 35  CDFNSHVRRYKVGQENFIQ--SFLTEMQWM--------RQLTGPRSISSIFFGGGTPSLI 84
           C F++ V +++    ++I     + +++ +           +  R      F     +  
Sbjct: 169 CGFDA-VLQFRDRVSSYIANGHPIDKIEILVLGGTWSEYPESYQREFCRDLFYAANTTFN 227

Query: 85  EPQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           E      + + I  N   S+  + +T+E  P  ++++     R  G  R+ +GVQ  +  
Sbjct: 228 ERPERLTLEEEIKLNEDASTRVIGLTLETRPDVIDLDEIARLRSYGCTRLQIGVQHTDNA 287

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVD 200
            L+ + R H+    +  + L ++   ++   L+  LP  T+        + L       D
Sbjct: 288 ILKKINRGHDVEATMRCLRLLKDNCFKVDIHLMPNLPGSTVEGDVEMFDKVLGDPDLQAD 347

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              +Y  +I   T+  K H++G      E+ 
Sbjct: 348 QWKIYPCSIVPWTVIDKWHREGSYNPYPEDQ 378


>gi|45359058|ref|NP_988615.1| radical SAM family protein [Methanococcus maripaludis S2]
 gi|45047933|emb|CAF31051.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 332

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 78/224 (34%), Gaps = 20/224 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQ---SFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEP 86
           C +C      +  +V    +     S   +++   +    + I    ++F  GT +   P
Sbjct: 68  CIFC-----PKMGRVISVEYCNVKYSLKEQIEHQIRRNKEKGIEKFYVYFYPGTNTHASP 122

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEE 142
           + +  + D           + I+I   P  +E           ++     I LG+Q++ +
Sbjct: 123 EYLKELWDFALS---FDDVLGISIGTRPDCLEDEKLDILENYVKEGYEIWIDLGIQTMHD 179

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++L FL R H++ +    +   +     +   +I  LP ++        +      +D L
Sbjct: 180 KTLDFLNRKHSSDDVRRVLLECKKRGILVCGHIILGLPDESWDMMMETAKILSDLEIDAL 239

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            +Y L + + T   +++  G+             +L        
Sbjct: 240 KIYPLVVVENTKLEEIYWKGEY---KSLDEKQYIHLVADFLEHI 280


>gi|324509273|gb|ADY43904.1| Elongator complex protein 3 [Ascaris suum]
          Length = 549

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 70/363 (19%), Positives = 123/363 (33%), Gaps = 57/363 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   +LT  + +
Sbjct: 101 CPHINFTGNICVYCPGGPDSDFEYSSQSYTGYEPTSMRAIRARYDPFIQTRSRLTQLQQL 160

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVEI 108
                       GGT   +        I  + D ++ + + S               + I
Sbjct: 161 GHPVDKVEFIIMGGTFMSLPQDYREYFIRSLHDALSGHTSSSVAEAVAFSERSRIKCIGI 220

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +G+QS  E       R H  S    A  +A++  
Sbjct: 221 TIETRPDYCMPRHLDEMLSYGCTRLEIGLQSTYEDVALHTNRGHTVSSVCEAFQMAKDAG 280

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP  T+ +      EL    ++  D L +Y   + +GT  Y++ + G   
Sbjct: 281 FKVVIHMMPNLPNVTVERDLQQFKELFENPAFQPDGLKIYPTLVIRGTGLYELWRTGKYK 340

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES---LH-NLNY--WRYGDYIG 277
                V V   +L   I S     +  Y +     +   S    H NL     +  D +G
Sbjct: 341 SYPPEVLV---DLIARILSLVPPWVRVYRVQRDIPMPLVSSGVEHGNLRELALKRIDELG 397

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           +        +VG   +   +  +    +++VR++  A    E FLS E    + L+   R
Sbjct: 398 LKCRDVRTREVGIQEIHNKVSPYD---VELVRRDYQANGGWETFLSYEDPKQDILVGLCR 454

Query: 337 LRE 339
           LR+
Sbjct: 455 LRK 457


>gi|315428006|dbj|BAJ49595.1| elongator complex protein 3 [Candidatus Caldiarchaeum subterraneum]
          Length = 499

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 79/244 (32%), Gaps = 39/244 (15%)

Query: 28  CVK-KCPYC----------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
           C   KC YC                       +        +++ +  ++ M        
Sbjct: 66  CPHGKCIYCPGGAPLGTPQSYTGEEAAVKTAAQLGYDPRKQVEAAVNRLRHMGHRVD--K 123

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----------------EITIEANP 114
           +  I  GG   +        +I + +     V+S+                  IT+E  P
Sbjct: 124 VELIIIGGTFTASPPEFQRWMIKECVDALNGVASSSLEEALRINTSSAIHVSGITVETKP 183

Query: 115 SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD 174
              +        + GV R+ +GVQ+L+++ L  L R H+  + + A    ++   ++ + 
Sbjct: 184 DWAKREKAVQLVEYGVTRVEIGVQALDDKILTTLNRGHSVEDVVEATADLKDTAFKVCYH 243

Query: 175 LIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           ++  LP  T  +       L     +  D L +Y   +  GT    M     L  P  + 
Sbjct: 244 IMPNLPGSTPHKDLNMFTTLFDDDRFRPDQLKIYPTLVLPGTGLETM-WRHGLYKPYSDD 302

Query: 232 AVDL 235
            +  
Sbjct: 303 ELVY 306


>gi|59712730|ref|YP_205506.1| Fe-S oxidoreductase [Vibrio fischeri ES114]
 gi|59480831|gb|AAW86618.1| predicted Fe-S oxidoreductase [Vibrio fischeri ES114]
          Length = 313

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 89/243 (36%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+    V  +   QE F +S   ++               +F   
Sbjct: 33  CPNRDGTIGKGGCTFCN----VASFADEQEQF-KSIHDQLTDRAGEVQRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  + +   K   +   V + +   P  V        +     G      L
Sbjct: 88  TSTFAEVQVLKNMYEEALKAANI---VGLCVGTRPDCVPDAVLDLLKGYVDDGYEVWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +   A    AR++  ++   LI  LP  T       L + L
Sbjct: 145 GLQTANDKTLKRINRGHDFACYDAITRKARSLGIKVCTHLIIGLPGDTRDDNRQTLDKVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  + G L  P  +  VD+      +T    ++   +S 
Sbjct: 205 ATGTDGIKLHPLHIVEGSTLAKAWRAGKLDAPEMDEYVDIACELIRLTPPEVVYH-RVSA 263

Query: 256 HSF 258
            + 
Sbjct: 264 TAR 266


>gi|297682569|ref|XP_002818990.1| PREDICTED: elongator complex protein 3-like [Pongo abelii]
          Length = 547

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|294139687|ref|YP_003555665.1| hypothetical protein SVI_0916 [Shewanella violacea DSS12]
 gi|293326156|dbj|BAJ00887.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 316

 Score = 92.7 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 89/247 (36%), Gaps = 22/247 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC  N     ++ G E  I+    +++  R+    ++   I +   
Sbjct: 33  CPNRDGTLGKGGCTYC--NVASFSFEHGTELSIR---EQLKLGRERARGKTSKYIAYFQA 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
             S        ++     +  +    V + +   P  V              G+     L
Sbjct: 88  YTS--TYDEYRVLKAKYDEAISDPDIVGLCVGTRPDCVSDEVIDLLLGYQNQGIEVWLEL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L+ + R H  ++    +  AR    ++   LI  LP +    +   L   L
Sbjct: 146 GLQSANDKTLKRINRGHTFNDYRDTVLRARAKGIKVCTHLILGLPGENHQDYLSSLDAIL 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  VD L L+ L I +G+   K  ++  +  L  E+ A+ +  L +        H   ++
Sbjct: 206 NTGVDGLKLHPLHIVEGSTMAKAWRNDRISLLTIEDYALSVGELIRHTPKDIIFHR--VT 263

Query: 255 NHSFLGA 261
            ++    
Sbjct: 264 AYAKKPM 270


>gi|114619479|ref|XP_001165532.1| PREDICTED: elongator complex protein 3 isoform 5 [Pan troglodytes]
          Length = 547

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|23510283|ref|NP_060561.3| elongator complex protein 3 [Homo sapiens]
 gi|145558902|sp|Q9H9T3|ELP3_HUMAN RecName: Full=Elongator complex protein 3; Short=hELP3
 gi|12654795|gb|AAH01240.1| Elongation protein 3 homolog (S. cerevisiae) [Homo sapiens]
 gi|21739842|emb|CAD38948.1| hypothetical protein [Homo sapiens]
 gi|117646792|emb|CAL37511.1| hypothetical protein [synthetic construct]
 gi|119583932|gb|EAW63528.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_a [Homo
           sapiens]
 gi|208966202|dbj|BAG73115.1| elongation protein 3 homolog [synthetic construct]
          Length = 547

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|114619483|ref|XP_001165334.1| PREDICTED: elongation protein 3 homolog isoform 1 [Pan troglodytes]
 gi|114619485|ref|XP_001165363.1| PREDICTED: elongation protein 3 homolog isoform 2 [Pan troglodytes]
 gi|114619487|ref|XP_519682.2| PREDICTED: elongation protein 3 homolog isoform 6 [Pan troglodytes]
 gi|114619489|ref|XP_001165434.1| PREDICTED: elongation protein 3 homolog isoform 3 [Pan troglodytes]
          Length = 532

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 86  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 144

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 145 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 204

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 205 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 264

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 265 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 324

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 325 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 380

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 381 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 437

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 438 LRK-CSEETFR 447


>gi|109085993|ref|XP_001110226.1| PREDICTED: elongator complex protein 3-like isoform 2 [Macaca
           mulatta]
          Length = 547

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|10434125|dbj|BAB14138.1| unnamed protein product [Homo sapiens]
          Length = 547

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVMAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|270488044|ref|ZP_06205118.1| conserved domain protein [Yersinia pestis KIM D27]
 gi|270336548|gb|EFA47325.1| conserved domain protein [Yersinia pestis KIM D27]
          Length = 117

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           SA++  +       L +YVH PFC K C +C  N  V R +   + ++     E++    
Sbjct: 39  SAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAA 98

Query: 65  LTGPRSISSIFFGGGT 80
           L   R +S + +GG  
Sbjct: 99  LFTGRQVSQMHWGGVR 114


>gi|84489186|ref|YP_447418.1| histone acetyltransferase [Methanosphaera stadtmanae DSM 3091]
 gi|84372505|gb|ABC56775.1| predicted histone acetyltransferase [Methanosphaera stadtmanae DSM
           3091]
          Length = 541

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 120/320 (37%), Gaps = 38/320 (11%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +        QE F+   L  M     ++    ++          +I P++   I D    
Sbjct: 148 TFASCTLDYQEWFVTQCLRAMNDFETVSKKIPVNQREIK-----IIPPEDFQYIHDAQKN 202

Query: 99  N-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N  +    + +T E  P   ++ +     + GV R+ LGVQ+L     + + R H   + 
Sbjct: 203 NEHSKVRCIGLTFETRPDYAKMEDINRMLQFGVTRVELGVQTLYNHIYKRVDRGHKIQDV 262

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEK 211
           I A  L R+   +++  ++  L    ++ +  ++            + D L +Y   + +
Sbjct: 263 IEANQLLRDSGIKVAMHMMPGL----LSSFSSDVNMFKRLFNEPLFSPDMLKIYPCLVTE 318

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISN---HSFLGAESLH 265
           G+ FY M K G+    +   AVDL    + I            +I      + +   +L 
Sbjct: 319 GSEFYDMWKKGEYEPYTSQQAVDLIVEVKKILPKWVRTMRIQRDIPATLIDAGVKKSNLG 378

Query: 266 NLNYWRYGD------YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE 319
            L Y R  +       I        R +   H+ A  IE    + ++++R +   V   E
Sbjct: 379 ELVYNRLEEEDIQCQCI--------RCREVGHKKAHGIEPDYNN-IELLRTDYDVVGGHE 429

Query: 320 -FLSSEQQADEFLMMGLRLR 338
            FLS E   ++ L+   RLR
Sbjct: 430 IFLSIEDVENDILIGFTRLR 449


>gi|62897655|dbj|BAD96767.1| elongation protein 3 homolog [Homo sapiens]
          Length = 524

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 78  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 136

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 137 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 196

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 197 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 256

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 257 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 316

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 317 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 372

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 373 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 429

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 430 LRK-CSEETFR 439


>gi|52548601|gb|AAU82450.1| histone acetyltransferase [uncultured archaeon GZfos17F1]
          Length = 575

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 93/252 (36%), Gaps = 13/252 (5%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+ IT E  P  +         + G  ++ +GVQS+ ++ L  + R H   +AIAA    
Sbjct: 245 NIGITFETRPDHLSTMEINRLLEMGATKVEVGVQSIYDRVLEKIDRGHTVQDAIAANKRL 304

Query: 165 RNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP    +        L     +  DHL +Y   + +GT+ ++  KD
Sbjct: 305 RDSGLKVGFHIMVGLPGSDASDDLSMFKTLFSDPLFCPDHLKIYPTLVTEGTVLHRWWKD 364

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHN---LNYWRYGDY 275
           G       + A+ L    +S+            +I         +  N   L   R    
Sbjct: 365 GSYRSLDNDSAIGLLADIKSVLPKWVRLQRIQRDIPAQQIAAGVTKSNIRQLAEERLRSM 424

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGL 335
            G         +VG   +   +    E  ++     G     + F+S E + +  L+  L
Sbjct: 425 GG-SCRCIRCREVGHASLRGRVPGKIELLVETYSACG---GTEHFISFEDRGNNILIGFL 480

Query: 336 RLREGISVKDWE 347
           RLR   S    E
Sbjct: 481 RLRFPDSPHRIE 492


>gi|3599396|gb|AAC62701.1| hypothetical protein [Cenarchaeum symbiosum]
          Length = 522

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 85/267 (31%), Gaps = 38/267 (14%)

Query: 25  WPF-CVK-KCPYC-------DFNSHVRRYKVGQENFIQSF------LTEMQWMRQLTGPR 69
            P+ C   +C YC         NS+     +        +         +  +R      
Sbjct: 86  MPYACPHGRCTYCPGGEASNTPNSYTGGEPIAAGAMNSGYDPEEQVRAGLARLRAHGHDV 145

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWT-----------------VSSNVEITIEA 112
           +   I   GGT   +  +     +                         V  NV +TIE 
Sbjct: 146 AKLEIVIVGGTFLFMPQEYQEWFVKSCYDALNGSASAGMEEAKHRNETAVHRNVGLTIET 205

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P      +       G  R+ +GVQSL E+    + R H   +   +   AR+   +++
Sbjct: 206 KPDYCRTEHVDAMLGFGATRVEIGVQSLREEVYLRVNRGHGYQDVTESFAAARDAGYKVA 265

Query: 173 FDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
             ++  LP  T      +L+          D L +Y   + +GT  Y+ +  G+    +E
Sbjct: 266 AHMMPGLPGATPEGDIEDLRMLFEDPALRPDMLKVYPALVVRGTPMYEEYSRGEYSPYTE 325

Query: 230 NVAVDLYNLTQS---ITSAHGLHAYEI 253
              + + +  ++     +       EI
Sbjct: 326 EEVIRVLSEAKARVPRWARIMRVQREI 352


>gi|126458716|ref|YP_001054994.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126248437|gb|ABO07528.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 477

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 81/233 (34%), Gaps = 41/233 (17%)

Query: 28  CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           C  +C +C            D    +R  + G + ++Q+      ++     P  +  + 
Sbjct: 22  CPGRCTFCPTARDAPKSYLSDSPVVLRAKRSGYDPYLQTAGRVKVYLENGHVPSKVEVVV 81

Query: 76  FGGGTPSLIE------------------------PQNIALI-LDGIAKNWTVSSNVEITI 110
            GG T S +                               +  + +     +   V + +
Sbjct: 82  MGG-TFSALPRGYREWFVANVYKALNDYPNWAAKAAESPSLEFEQLRNEAALLRMVALAV 140

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P  V+        + GV R+ LGVQS+ +  L  + R H A EA  A  L ++   +
Sbjct: 141 ETRPDYVDEGEVDFLLQLGVTRVELGVQSIYDDVLAKVKRGHGAREAAEATALLKDAAYK 200

Query: 171 MSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           + + L+  LP        +    +    +Y  D + +Y L +  GT  Y+  +
Sbjct: 201 VCYHLMPGLPGSDPDRDLEMFKTVFSDPAYMPDCVKIYPLYVVPGTELYEQWR 253


>gi|327312020|ref|YP_004338917.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326948499|gb|AEA13605.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
          Length = 468

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 38/244 (15%)

Query: 28  CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           C  +C +C            D  + +R  +   + + Q       ++     P  I +I 
Sbjct: 28  CPGQCVFCPTARGVPKSYMPDSPAVMRASRSRYDPYRQVVARISNYLAGGHRPSKIEAIV 87

Query: 76  FGGGTPSLIEPQNIAL---ILDGIAKNWTVSSN--------------------VEITIEA 112
            GG   +L           +L  +      SS                     V +T+E 
Sbjct: 88  MGGTFTALPRSYQFWFVGNLLKALNDYPNWSSASAVVDIEAEQARNETAALRLVALTVET 147

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +E        + GV R+ +GVQS+ +  L  + R H   E + A    ++   ++ 
Sbjct: 148 RPDYLERGQIDDLLEMGVTRVEIGVQSIYDDVLSLVRRGHGVKEVVEATARLKDAAYKVC 207

Query: 173 FDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           + L+  LP        +    +    ++  D + +Y   +  GT  Y   + G      E
Sbjct: 208 YHLMPGLPGSDPDRDLEMFRTVFEDPAFKPDCVKIYPTLVVPGTELYDWWRSGRYRTYDE 267

Query: 230 NVAV 233
               
Sbjct: 268 ETWR 271


>gi|254169227|ref|ZP_04876061.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|289596760|ref|YP_003483456.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|197621823|gb|EDY34404.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
 gi|289534547|gb|ADD08894.1| histone acetyltransferase, ELP3 family [Aciduliprofundum boonei
           T469]
          Length = 514

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 43/246 (17%)

Query: 26  PF-CVK-KCPYC-------DFNSHVRRYKVG--QENF----IQSFLTEMQWMRQLTGPRS 70
           PF C   KC YC          S+            +     +     ++ +R +  P  
Sbjct: 79  PFPCPHGKCIYCPGGPEKGTAQSYTGHEPAALRAAQYNFDPYEQTRARIEQLRAIGHPTD 138

Query: 71  ISSIFFGGGTPSL-------------------IEPQNIAL--ILDGIAKNWTVSSNVEIT 109
              +   GGT +                    ++ +N+    +++  AKN      + +T
Sbjct: 139 KIDLIIMGGTFTARPQSYQEWFVKRAFDAMNGVDAKNLEEAQLINEDAKNR----CIGLT 194

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +E  P            K G  R+ LG+Q++ +  L  + R H   E+I A  LA++   
Sbjct: 195 VETRPDWFMEKEIDFALKLGATRVELGIQTVYDDILEKVKRGHTIRESILATRLAKDAGF 254

Query: 170 RMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++++ ++  LP  ++ +      E+    ++  D L +Y   + KGT  Y+M K G+   
Sbjct: 255 KINYHMMPGLPGSSLERDYKAFKEIFENPNFRPDMLKIYPTLVVKGTELYEMWKKGEYEP 314

Query: 227 PSENVA 232
            +    
Sbjct: 315 YTLEEM 320


>gi|303243626|ref|ZP_07329967.1| conserved hypothetical protein [Methanothermococcus okinawensis
           IH1]
 gi|302485868|gb|EFL48791.1| conserved hypothetical protein [Methanothermococcus okinawensis
           IH1]
          Length = 362

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 87/238 (36%), Gaps = 21/238 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFG 77
           C  K        C +C      R   V   N   +   +++   +    + I    I+F 
Sbjct: 84  CPNKDGTLDTKGCIFC--PKMGRPISVKYCNVKYTLKEQIEKQIEKQKNKGIEKFYIYFY 141

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----- 132
            GT +   P+ +  + D       V   + ++I   P  +E           VN      
Sbjct: 142 PGTNTHGTPERLKELWDFALSYPDV---IGLSIGTRPDCLEDEKLDILEDY-VNEGYEIW 197

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I LG+QS+ +++L FL R HN S+ I AI+  +     +   +I  LP +T        Q
Sbjct: 198 IDLGIQSMHQRTLDFLNRRHNVSDTIKAINNCKKRNIFVCGHVILGLPNETWDDMIKTAQ 257

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                 +D L +Y L + + T   +++  G+     E   V L        S + L  
Sbjct: 258 ILSDLEIDALKIYPLVVIQNTELEELYWRGEYKTLDEKQYVKLVCDFLEHLSPYVLIQ 315


>gi|157960842|ref|YP_001500876.1| putative radical SAM protein [Shewanella pealeana ATCC 700345]
 gi|157845842|gb|ABV86341.1| conserved hypothetical radical SAM protein [Shewanella pealeana
           ATCC 700345]
          Length = 309

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 83/246 (33%), Gaps = 20/246 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC  N     ++   E  IQ  L   Q   +L    S    +F   
Sbjct: 33  CPNRDGTLGKGGCTYC--NVASFSHEHKTELSIQEQLA--QGRERLPSKSSKYIAYFQAY 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +        ++     +    S  V + +   P  V     +        GV+    L
Sbjct: 89  TSTY---DEYLVLKQKYDEAIQDSDIVGLCVGTRPDCVPNEVLELLVGYQNDGVDVWLEL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  + +L+ + R H+ +     +  AR +  ++   LI  LP +    +   L + L
Sbjct: 146 GLQSANDATLKKINRGHDFAAYEDTVIRARKLGIKVCTHLILGLPGEAHEDYLQTLDKVL 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VD + ++ L I +G+   K  ++  + L                T    +    ++ 
Sbjct: 206 RVGVDGMKIHPLHIVEGSTMAKAWRNNKMSLLELEDYAYSVGELIRRTPKEVIFH-RVTA 264

Query: 256 HSFLGA 261
           ++    
Sbjct: 265 YAKKPM 270


>gi|119583933|gb|EAW63529.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_b [Homo
           sapiens]
          Length = 455

 Score = 91.9 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 55/363 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LRE 339
           LR+
Sbjct: 453 LRK 455


>gi|171185657|ref|YP_001794576.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170934869|gb|ACB40130.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
          Length = 412

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 14/233 (6%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           CV +C +C          R         ++++       +   P         G TPS  
Sbjct: 163 CVYRCAFCQTWAQGRVRFRPLENVVELAKAYVAAGHRAIRFIAPVGFLYGSPDGRTPS-- 220

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQ 143
            P  +A +L  + +   V        E  P +V  +  +  +    NR IS G+Q+  ++
Sbjct: 221 -PDALAALLKAVREVGGVPHLGTFPSETRPETVTRDVLKAVKPYVANRRISFGLQTASDK 279

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--DH 201
            L+   R+H+ +    A+  A ++  +   D+I  LP +        ++          +
Sbjct: 280 LLKLTKRDHDVAAVEEAVKTAVSMGFKPVVDVIGGLPGEEEDDVVKTVREMEKLVAMGAN 339

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + ++      GT  +         L  + +      +       +     E+S
Sbjct: 340 IRMHYYIPLPGTPLWGRRPAPPHPLYEQFIKRHRRKV-----EGYWREQIELS 387


>gi|212636543|ref|YP_002313068.1| Fe-S oxidoreductase [Shewanella piezotolerans WP3]
 gi|212558027|gb|ACJ30481.1| Fe-S oxidoreductase, putative [Shewanella piezotolerans WP3]
          Length = 294

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 91/247 (36%), Gaps = 22/247 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC  N     ++   E  IQ  LT+ +        + I+  +F   
Sbjct: 21  CPNRDGTLGKGGCTYC--NVASFSHEHKTELSIQEQLTQGRERLSTKPSKYIA--YFQAY 76

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SL 135
           T +        ++     +    +  V + +   P  V          Y++ G++    L
Sbjct: 77  TSTY---DEYLVLKQKYDEAIKGTDIVGLCVGTRPDCVPDEVIELLAQYQQLGLDVWLEL 133

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+   ++L+ + R H+       +  AR    ++   LI  LP +  T +   L + L
Sbjct: 134 GLQTANNKTLKRINRGHDFDVYADTVKRARERGIKVCTHLILGLPGEGHTDYLETLNKVL 193

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              VD L L+ L I +G+   K  ++  +  L  E+ A  +  L +        H   ++
Sbjct: 194 DAGVDGLKLHPLHIVEGSTMAKAWRNNKMDLLTIEDYAFSVGELIRHTPEDIIFHR--VT 251

Query: 255 NHSFLGA 261
            ++    
Sbjct: 252 AYAKKPM 258


>gi|317485297|ref|ZP_07944177.1| hemN protein [Bilophila wadsworthia 3_1_6]
 gi|316923423|gb|EFV44629.1| hemN protein [Bilophila wadsworthia 3_1_6]
          Length = 299

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 1/170 (0%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           + T  R I  + F GGT + +  +     L    +         +     P ++  +  Q
Sbjct: 10  ERTASRPIE-LAFYGGTFTALPERLQMECLALAMQAKEKGIVCRVRCSTRPDALRPDRLQ 68

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
             R AG++ + LG+QS   ++L    R +N   A     L +    ++   L+  +P  T
Sbjct: 69  ALRHAGLDLVELGIQSFHTEALLDAQRGYNGDRAREGCRLIKESGLKLGIQLLPGMPGST 128

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             ++  +++ AL+++   L  Y   +  GT   +  + G       +  +
Sbjct: 129 PQRFSEDVEEALAFSPSCLRFYPCLVVDGTPLAERWRMGQYAPWELDTTI 178


>gi|302337114|ref|YP_003802320.1| hypothetical protein Spirs_0581 [Spirochaeta smaragdinae DSM 11293]
 gi|301634299|gb|ADK79726.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
          Length = 354

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 80/245 (32%), Gaps = 30/245 (12%)

Query: 28  CVKK-------CPYCD----------------FNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C  +       C YCD                              +      ++     
Sbjct: 53  CPNRTPDGRGGCFYCDEAGSRAAYQETNEPHSCLRSASGPDPDDPYWQTWMKKQIDEGGA 112

Query: 65  LTGPR-SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
               R  + S        S      +  +        +++S  E+ +   P  V+    +
Sbjct: 113 FLSNRYGVHSFILYVQAFSG-TWAPVPRLKHIYDYLLSLASFRELIVGTRPDCVDEEVVK 171

Query: 124 GYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
                  +      + LG+QS  +Q+LR +GR H+ +    A   A+    + S  LI+ 
Sbjct: 172 LLSSYASSLDMDVWLELGLQSYHDQTLRHIGRGHDTTAFERAYKTAKAGGLKCSVHLIFG 231

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP +     E  ++R      D + ++ L I +GT F +  ++G L +P  +  + L   
Sbjct: 232 LPGEDDAMMEESVRRLARLRPDGVKIHNLHIAEGTRFAQWWREGRLEVPDTSHHLRLVAD 291

Query: 239 TQSIT 243
              + 
Sbjct: 292 ALELL 296


>gi|85860874|ref|YP_463076.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
 gi|85723965|gb|ABC78908.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
          Length = 335

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 82/225 (36%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YCD     R  ++ QE  + S   +++  R+    R  +     +F   T +     +
Sbjct: 68  CIYCD----GRGSRLRQEGPLPSVSEQIRRGREFYRNRKGAKKFIAYFQTFTNTYAPCGS 123

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  + D       V   + +++   P  V        +    +R   +  G+QS+ +++L
Sbjct: 124 LKRLYDEALAQEDV---IGLSVGTRPDCVSDEVLGLLKDYARDRHVWLEFGLQSIHDKTL 180

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H A++ + A+  A +    +   +I  LP +             S  +  + ++
Sbjct: 181 LRINREHTAAQFLDAVARAVDENLLICTHIILGLPGENHEDVMQTAATLASLPIQGIKIH 240

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L   +GT+  + +K G L L      V        I     +  
Sbjct: 241 LLLALEGTVLGEEYKKGQLTLWPREEYVQTVCDVLEILPPDMVIQ 285


>gi|332299105|ref|YP_004441027.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
 gi|332182208|gb|AEE17896.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
          Length = 626

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC           G++  +      ++    L   + +  +F     P+     
Sbjct: 242 CPFKCSYC-------YESKGEKTVVHFPTERIRAELDLFVQKKVRQVFV--LDPTY--NA 290

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    LD +A     + ++    E     ++    Q +     + + +G+QS  E  L  
Sbjct: 291 DKKRALDMLAYIRRTAPDIFFHFECRAEFLDAALAQAFASIPCS-LQIGLQSAHEHVLAL 349

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R  N  + I  I L         FDLIY LP  +++ +   +  A+S   + L +++L
Sbjct: 350 VHRGFNKKDFIKKIGLLNKSGAVFGFDLIYGLPGDSLSGFRESIDFAVSLYPNSLEIFRL 409

Query: 208 TIEKGTLFYKMH 219
           ++  GT  Y   
Sbjct: 410 SVLPGTDLYDRR 421


>gi|114619481|ref|XP_001165496.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
          Length = 499

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 55/363 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LRE 339
           LR+
Sbjct: 453 LRK 455


>gi|7022443|dbj|BAA91600.1| unnamed protein product [Homo sapiens]
          Length = 499

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 55/363 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LRE 339
           LR+
Sbjct: 453 LRK 455


>gi|300120540|emb|CBK20094.2| unnamed protein product [Blastocystis hominis]
          Length = 529

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/357 (21%), Positives = 130/357 (36%), Gaps = 59/357 (16%)

Query: 32  CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C YC      DF            + +R  +   + +IQ+     Q  R       +  +
Sbjct: 53  CLYCAGGPDSDFEYSTQSYTGYEPTSMRAIRCRYDPYIQTRTRVEQLRRLGHSVDKVEFV 112

Query: 75  FFGGGTPSLIEPQN------IALILDGIAKNWTVS-------------SNVEITIEANPS 115
             GG   + +  +       I  + D ++ + + S               V ITIE  P 
Sbjct: 113 VMGG---TFLSLEQSYQDEFIMKLHDALSGHHSHSVEEAVKYSEQSQSKCVAITIETRPD 169

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
                +     + G  RI +GVQS+ E   R   R H  +    +   +++   ++   +
Sbjct: 170 YCLKPHLNNMLRYGCTRIEIGVQSVYEDVARDTNRGHTVTAVCNSFEQSKDCGFKVVTHM 229

Query: 176 IYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           +  LP     +      EL    ++  D L LY   + +GT  Y++ K G       N+ 
Sbjct: 230 MPDLPNMGYERDILGFKELFENPAFRPDGLKLYPTLVIRGTGLYELWKTGKYRNYPPNML 289

Query: 233 VDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGIGPGAH 283
           V   +LT    S     +  Y I     +     G E  SL  L   R  D +G+     
Sbjct: 290 V---DLTARALSLIPPWMRVYRIQRDIPMPLVTSGVETGSLRQLALQRMAD-LGLVCRDI 345

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
              +VG   +   I+    + ++++R++  A    E FLS E    + L+  LRLR+
Sbjct: 346 RMREVGIQDIHKKIQP---TKVELIRRDYAANGGWETFLSYEDPEKDILIGLLRLRK 399


>gi|109085995|ref|XP_001110043.1| PREDICTED: elongator complex protein 3-like isoform 1 [Macaca
           mulatta]
          Length = 499

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/363 (20%), Positives = 130/363 (35%), Gaps = 55/363 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LRE 339
           LR+
Sbjct: 453 LRK 455


>gi|119873373|ref|YP_931380.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674781|gb|ABL89037.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 398

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 21/250 (8%)

Query: 16  SNSLGVYVHWPF---CVKKCPYCDFNSHVR-----RYKVGQENFIQSFLTEMQWMRQLTG 67
           S SLG+Y        C  +C +C   +  +     R         +++++      +   
Sbjct: 134 SKSLGIYPPIEIMRSCAYRCAFC--QTWAQGPLRFRPLENVVELAKAYVSTGHREIRFIA 191

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
           P         G TP    P  +A +L  I +   V        E  P +V  +  +  + 
Sbjct: 192 PVGFLYGSSDGRTP---NPDALASLLKSIRETGGVPYLGTFPSETRPETVTRDILKAIKP 248

Query: 128 AGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
              NR IS G+Q+  E+ L+   R H+ +    A+  A ++  +   D+I  LP +    
Sbjct: 249 YVANRRISFGLQTASEKLLKLTKRGHDIATVEEAVKTAVSMGFKPVVDVIGGLPGEDEDD 308

Query: 187 WEMELQRALSYAV--DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               ++          ++ ++      GT  +         L  + +      +      
Sbjct: 309 VVETVREMEKLIAMGANIRMHYYIPLPGTPLWGRRPAPPHPLYEQFIKRHRRKV-----E 363

Query: 245 AHGLHAYEIS 254
            +     E+S
Sbjct: 364 GYWREQIELS 373


>gi|194383120|dbj|BAG59116.1| unnamed protein product [Homo sapiens]
 gi|221045494|dbj|BAH14424.1| unnamed protein product [Homo sapiens]
          Length = 475

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 29  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 87

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 88  HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 147

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 148 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 207

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 208 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 267

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 268 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 323

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 324 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 380

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 381 LRK-CSEETFR 390


>gi|154249044|ref|YP_001409869.1| putative radical SAM protein [Fervidobacterium nodosum Rt17-B1]
 gi|154152980|gb|ABS60212.1| conserved hypothetical radical SAM protein [Fervidobacterium
           nodosum Rt17-B1]
          Length = 293

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 92/241 (38%), Gaps = 32/241 (13%)

Query: 28  CVKK------CPYCD-----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-- 74
           C  +      C +CD     F++                  +++ M++    + I+    
Sbjct: 22  CPNRTNGRPGCLFCDETGSGFSTFAGYD----------IKKQIELMKEKYKKKGITKFIA 71

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK----AGV 130
           +F   T +         IL  I         V++ I   P  ++ N  +  ++      V
Sbjct: 72  YFQNYTNTYAPID----ILKQIYIQAIDDDIVQLDIATRPDYIDENVLKLLKEISEQYNV 127

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  + +G+QS    +L  + R H  +E I A++L +N    +   +I  LP   M     
Sbjct: 128 SISLDIGLQSANYHTLVKVNRGHTLAEYIYAVNLIKNYGFEVVSHVILNLPGDNMLDVIE 187

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             +   +  VD + ++ L I +GT+F +M+K G L + + +  V+         S H + 
Sbjct: 188 SAKILSALKVDGVKIHSLYIVEGTIFGEMYKSGKLNICTFDEYVNRVITFLEWLSPHIVI 247

Query: 250 A 250
            
Sbjct: 248 H 248


>gi|163782172|ref|ZP_02177171.1| hypothetical protein HG1285_18604 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882704|gb|EDP76209.1| hypothetical protein HG1285_18604 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 318

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 21/233 (9%)

Query: 26  PF-CVKK--------CPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           PF C  +        C +C   S        V  E  I+     M+  ++  G   +  +
Sbjct: 31  PFTCPNRDGSKAKGGCTFCHDGSKPSMLSPSVPLETQIE---EGMERAKRKYGEDILFFV 87

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVN 131
           ++   T +  +   +  + D           V I +   P               + G+ 
Sbjct: 88  YYQSYTNTYADINTLRRVYDTA---LGFEGVVGIDVGTRPDCAPEEVLDLLTGYAERGLE 144

Query: 132 RI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
                G+QS   ++L+ + R H  S+ + A+  A+    ++   +I  LP +        
Sbjct: 145 VWVEFGLQSANFETLKSINRAHGVSDFVDAVLRAKKRPLKVCAHMIVGLPGEGREDIIET 204

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +   +  VD + ++ L + +GT+    ++ G+    S    V+L +    I 
Sbjct: 205 AKLLAALPVDGVKIHPLHVIRGTVMALQYERGEFSPLSLEEYVELCSEVIEIL 257


>gi|255024948|ref|ZP_05296934.1| coproporphyrinogen III oxidase [Listeria monocytogenes FSL
          J1-208]
          Length = 96

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 12 TGQGSNSLG-VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
          T Q SN    VY+H PFC   C YCDFN      +   + ++   + EM+          
Sbjct: 18 TNQSSNESSAVYIHIPFCEHICYYCDFNKVFLEGQ-PVDEYVDLLIKEMELTAAKGPIAP 76

Query: 71 ISSIFFGGGTPSLIEPQNI 89
          + ++F GGGTP+ +    I
Sbjct: 77 VDTVFVGGGTPTTLNESQI 95


>gi|121533801|ref|ZP_01665628.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307792|gb|EAX48707.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
          Length = 358

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 3/216 (1%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           + +++    C  +C +C+               +   +     + +LT PR +  + F G
Sbjct: 13  IPIFIPHYGCHHRCIFCNQRKITGVETSVTAEEVGKIIAI--HLARLTLPRYVE-VAFYG 69

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           G+ + + P     +L   ++         I +   P  + +       + GV+ I LGVQ
Sbjct: 70  GSFTALSPAVQRALLQPASEALRNGRIQAIRVSTRPDCISLEIVDNLVRFGVSTIELGVQ 129

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           SL++  L    R H+A+  + A+ + +         L+  LP +               +
Sbjct: 130 SLDDAVLAAAARGHDAAAVVKAVQIIKAAGVTCGLQLMPGLPGEDWPSLLRTAVAVGRLS 189

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
              + +Y   +   T    +++ G     + + AV 
Sbjct: 190 PSFVRIYPAVVITDTDLAALYRRGQYTPLTLDEAVR 225


>gi|300727095|ref|ZP_07060514.1| radical SAM protein, family [Prevotella bryantii B14]
 gi|299775639|gb|EFI72230.1| radical SAM protein, family [Prevotella bryantii B14]
          Length = 305

 Score = 91.1 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 76/217 (35%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    Y    +   +      ++  +          +F   T +      +  
Sbjct: 42  CTYCDNRTFNPSYCHRSKTITEQLEDGKEFFARKYPDMK-YLAYFQAYTNTY---DTLEH 97

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           +     +   V   V I I   P  V     Q   +        +  GV++  +++L+ +
Sbjct: 98  LKAMYEEALKVPDVVGIVIGTRPDCVSDELLQYLAELNQRTFVLVEYGVETTNDETLKRI 157

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+   +  AI  +  +   +   +I  LP +   +   +     S  +D L ++Q+ 
Sbjct: 158 NRGHDFECSKRAIIKSHQLGLTVGAHIILGLPGEDAKESIRQASVISSLPIDILKIHQMQ 217

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           I +GT+    +++    + S +  ++L +        
Sbjct: 218 IIRGTILAHEYQEHPFHVYSVDEYIELISSYIQYLRN 254


>gi|150402663|ref|YP_001329957.1| radical SAM family protein [Methanococcus maripaludis C7]
 gi|150033693|gb|ABR65806.1| conserved hypothetical radical SAM protein [Methanococcus
           maripaludis C7]
          Length = 332

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 14/220 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQNI 89
           C +C      R   V   N   S   +++   +    + I    ++F  GT +   P+ +
Sbjct: 68  CIFC--PKMGRSISVEYCNVKYSLKDQIEAQIKQNKEKGIGKFYVYFYPGTNTHGTPEKL 125

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQSL 145
             + D           + I+I   P  +E           ++     I LGVQ++ +++L
Sbjct: 126 KELWDFALS---FEDVIGISIGTRPDCLEDEKLDILENYVKQGYEIWIDLGVQTMHDKTL 182

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            FL R H++ +   A+   +     +   +I ALP +         +      +D L +Y
Sbjct: 183 DFLNRKHSSDDIRRAVIECKKRGILVCGHIILALPNENWDMMMETAKVLSDLEIDALKIY 242

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            L + + T   K++  G+             +L       
Sbjct: 243 PLVVIENTELEKIYWKGEY---KSLDEKQYIHLVADFLEH 279


>gi|256831115|ref|YP_003159843.1| hypothetical protein Dbac_3355 [Desulfomicrobium baculatum DSM
           4028]
 gi|256580291|gb|ACU91427.1| conserved hypothetical protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 317

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 82/229 (35%), Gaps = 12/229 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG---TPSLIEPQN 88
           C +C  N       + +     S   +    R+L+  R   + F G     + +    + 
Sbjct: 44  CAFC--NQKGTGTGLAEAGM--SLRHQYFAYRELSRDRDTDTRFLGYLQSFSNTHGPAER 99

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--SLGVQSLEEQSLR 146
           +  +L  +A    +   V + I   P  ++       R A    +   LG+QS ++ +L 
Sbjct: 100 LRALLQELA---GLPDLVGLAIGTRPDCLDEEKLDILRSAPFEELWLDLGLQSAQDSTLH 156

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+A+        A     ++   +I  LP + +  +E  +    S  V  + ++ 
Sbjct: 157 RINRGHDAACFATWAQKAAERGIKVCAHVITGLPGENLADFEQTILFVNSLPVSGIKIHN 216

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           L I + T      + G + L S+  +        ++     +     S+
Sbjct: 217 LYICRDTPLESAWRAGSIALLSQEESQTWLVRGIALLRQDIVIHRINSD 265


>gi|197117048|ref|YP_002137475.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197086408|gb|ACH37679.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
           TIGR01212 family [Geobacter bemidjiensis Bem]
          Length = 318

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 15/204 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YCD +S   +  V      +     M + R          ++F   
Sbjct: 38  CPNRDGSRGTGGCIYCDNSSFSPKETVAVIPIEEQMAAGMAYHRTRLASEKFI-VYFQKF 96

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + ++ +      +  V   V I++   P S++ +      +   +R   + LG
Sbjct: 97  TNTYAPVEKLSDLYRRALSHPDV---VGISVGTRPDSIDDDAVALLTELARDRYVCVELG 153

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+++  L  + R H  +E ++ +         +   LIY  P +  + +    +   S
Sbjct: 154 LQSIDDAILTGINRGHTFAEYLSTVDRLAGRGIDICTHLIYGFPGEKRSGFVKGARLISS 213

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             V  + L+QL   +GT   +M++
Sbjct: 214 LPVTAVKLHQLHAVEGTKLARMYR 237


>gi|289548895|ref|YP_003473883.1| hypothetical protein Thal_1124 [Thermocrinis albus DSM 14484]
 gi|289182512|gb|ADC89756.1| conserved hypothetical protein [Thermocrinis albus DSM 14484]
          Length = 314

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 80/238 (33%), Gaps = 17/238 (7%)

Query: 26  PF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           PF C           C YC F      +        +     ++  R+  G      I++
Sbjct: 33  PFTCPNIDGTKATGGCTYC-FAGTRPAHLSPSVPLKEQIEEGIKRARERYGKNLYFFIYY 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI 133
              + +  + + +  + D           V I +   P        +  + Y + G+   
Sbjct: 92  QSYSNTYGDKEYLKKVYDTA---LEFDEVVGIDVGTRPDCAPEWVLDLLESYTEKGLEVW 148

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
              G+QS    +L+F+ R H  S+ + A+   +    ++   +I  LP +         +
Sbjct: 149 VEYGLQSANFSTLKFINRAHGVSDFVDAVLRTKKRNLKVCAHVILGLPHEDREDMIETAK 208

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              S  +D + ++ L + KGT   + +  G+  + S      +      +   + +  
Sbjct: 209 LVASLPIDGIKIHPLHVIKGTKMAEQYMRGEFRVLSLEEYASVAADVIELLPPNMVIH 266


>gi|240102334|ref|YP_002958642.1| Histone acetyltransferase-like protein [Thermococcus gammatolerans
           EJ3]
 gi|239909887|gb|ACS32778.1| Histone acetyltransferase-like protein [Thermococcus gammatolerans
           EJ3]
          Length = 589

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +     K G  R+ LGVQ++         R H   E + A  L R
Sbjct: 237 VGLTIETRPDWAFERHIDRMLKLGTTRVELGVQTIFNFIHERTKRGHGVEEIVKATQLLR 296

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     +       +  D L +Y   + K    Y+  K+G
Sbjct: 297 DAGLKINYHIMPGLPGSNFERDLYTFRTIFEDPRFRPDMLKIYPTLVTKDAPLYRWWKEG 356

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                    AV+L      +            +I     +      NL    + + I  G
Sbjct: 357 KYRPYRTEEAVELLVEAYKLFPKWVRVMRIQRDIPVQLIVDGVKHSNLGQLVFNELIKRG 416

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG       I+   E  +K++R++  A   +E FLS E   ++ L+  LR
Sbjct: 417 IRPREIRFREVGHMMEKFGIQPEVEH-IKLLREDYDAAGGREIFLSFEDVKNDILIGFLR 475

Query: 337 LR 338
           LR
Sbjct: 476 LR 477


>gi|170289789|ref|YP_001736605.1| ELP3 family histone acetyltransferase [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170173869|gb|ACB06922.1| histone acetyltransferase, ELP3 family [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 471

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 87/237 (36%), Gaps = 38/237 (16%)

Query: 26  PF-CVK-KCPYC--------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           PF C   +C YC         +       +R  K+  + ++Q     M +      P  +
Sbjct: 23  PFPCPHGRCIYCPGGGETPQSYVEMSPIVIRGSKLNYDPYLQVTQRLMDFSSIGVHPSKV 82

Query: 72  SSIFFGG-------------------GTPSLIEPQNIALILDGIAKNWTVSS--NVEITI 110
             I  GG                      S + P+  +  L    +    SS   V +T+
Sbjct: 83  ELIIMGGTFNAQPFDYQEWFVKRALDAMNSYMGPEVRSRSLIEAQELNETSSVRCVAMTL 142

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P     ++       G  R+ LGVQS+ E  L  + R H+  + I A  + ++   +
Sbjct: 143 ETRPDWAMEDHVDKMLYLGFTRVELGVQSIYEDVLERVRRGHSTIDTIVATRILKDSAYK 202

Query: 171 MSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + + L+  LP   + +    L+  L   S+  D L +Y   +  GT  Y M + G+ 
Sbjct: 203 VGYHLMPGLPGSDLDRDLEALRIVLSDPSFRPDMLKIYPTLVIPGTPLYDMWRRGEY 259


>gi|261330654|emb|CBH13639.1| histone acethyltransferase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 679

 Score = 90.7 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 3/144 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P +V     +  R+ G  R+ LGVQ  ++  L  + R     EA+ AI L +
Sbjct: 284 IGVTLETRPDTVNEEMLRQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTRDEAVHAIKLLK 343

Query: 166 NIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  T    +    ++  +     D   +Y       ++  + +K+G
Sbjct: 344 DSCFKVDIHLMPDLPGSTPENDKKMFSDVLYSPELQADQWKIYPCQTTPFSVIEEWYKEG 403

Query: 223 DLVLPSENVAVDLYNLTQSITSAH 246
                     +D+    +      
Sbjct: 404 KYQPYGLTNLIDVILFAKRRVQPW 427


>gi|207108808|ref|ZP_03242970.1| coproporphyrinogen III oxidase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 163

 Score = 90.7 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 2/123 (1%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR- 63
           +A+ N+   +    L +Y H PFC   C +    SH+   +  +  +I     E+  ++ 
Sbjct: 39  TAFFNHDNLKNPMPLSLYTHLPFCRSACLFLRLFSHLHELRREKTRYISYLKKELALLKN 98

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNF 122
            +   R +    +GGGTP+   P  +  I   I +     S ++E++ E +P      + 
Sbjct: 99  AMDTNREVVQFHYGGGTPTFFSPIQLDEITQSIQEVFPNFSQDIEMSCEIDPRHFTKEHM 158

Query: 123 QGY 125
           Q  
Sbjct: 159 QTL 161


>gi|72393213|ref|XP_847407.1| histone acethyltransferase [Trypanosoma brucei TREU927]
 gi|62175732|gb|AAX69862.1| histone acethyltransferase, putative [Trypanosoma brucei]
 gi|70803437|gb|AAZ13341.1| histone acethyltransferase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 679

 Score = 90.7 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 3/144 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P +V     +  R+ G  R+ LGVQ  ++  L  + R     EA+ AI L +
Sbjct: 284 IGVTLETRPDTVNEEMLRQLRRFGCTRVQLGVQHTDDAVLLAVNRQSTRDEAVHAIKLLK 343

Query: 166 NIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  T    +    ++  +     D   +Y       ++  + +K+G
Sbjct: 344 DSCFKVDIHLMPDLPGSTPENDKKMFSDVLYSPELQADQWKIYPCQTTPFSVIEEWYKEG 403

Query: 223 DLVLPSENVAVDLYNLTQSITSAH 246
                     +D+    +      
Sbjct: 404 KYQPYGLTNLIDVILFAKRRVQPW 427


>gi|194390026|dbj|BAG60529.1| unnamed protein product [Homo sapiens]
          Length = 455

 Score = 90.7 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 9   HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 67

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 68  HSVDKVEFIVTGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 127

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 128 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 187

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 188 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 247

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 248 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 303

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 304 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 360

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 361 LRK-CSEETFR 370


>gi|119872671|ref|YP_930678.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674079|gb|ABL88335.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 469

 Score = 90.7 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 86/245 (35%), Gaps = 48/245 (19%)

Query: 23  VHW------PF-CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           VH       PF C  +C +C            D    +R  + G + + Q       ++ 
Sbjct: 14  VHVVAVMTHPFPCPGRCSFCPSAAGVPKSYMPDSPVVLRAGRSGFDPYRQVVGRVKVYLD 73

Query: 64  QLTGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVSSNVE------------ 107
               P  +  +  GG T S +        I  +   +    + ++  +            
Sbjct: 74  NGHMPSKVEVVVMGG-TFSALPRWYREWFIGNVFKALNDYPSWAAGADPSPDLELEQRRN 132

Query: 108 ---------ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
                    +T+E  P  V+V       + GV R+ LGVQS+ +  L  + R H  +E +
Sbjct: 133 EGARIRLVALTVETRPDYVDVGEVDFLLRLGVTRVELGVQSIYDDVLARVDRGHGVAEVV 192

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
            A  L ++   ++ + L+  LP        +   E+     +  D + +Y   +  GT  
Sbjct: 193 RATALLKDSAYKVCYHLMPGLPGSDPDRDLEMFREVFSNPDFMPDCVKIYPTYVVPGTRL 252

Query: 216 YKMHK 220
           Y+  +
Sbjct: 253 YEEWR 257


>gi|88797931|ref|ZP_01113518.1| hypothetical protein MED297_00805 [Reinekea sp. MED297]
 gi|88779128|gb|EAR10316.1| hypothetical protein MED297_00805 [Reinekea sp. MED297]
          Length = 310

 Score = 90.7 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 17/211 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+ N           +        +  ++  TG       +F   
Sbjct: 33  CPNRDGSKGIGGCTFCN-NKSFFPNDFSPASVATQLAENIPRLKAKTGAGKF-LAYFQAY 90

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SL 135
           + +     ++  +           + V + I   P  +           ++ G      L
Sbjct: 91  SNTY---GDLERLKQMYLDAIQHDAVVGLCIGTRPDCIPDVLLAVLVDIQQQGYEVWLEL 147

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L  + R H  ++   A+  AR +  ++   LI  LP ++        Q+ L
Sbjct: 148 GLQSAHDETLALINRGHTMADYRDAVTRARQLGLKVCTHLIVGLPGESKIHVLDSWQQVL 207

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              VD +  + L + KGT   +    GD + 
Sbjct: 208 DAGVDGVKWHPLHVVKGTQLARQLTQGDYIC 238


>gi|332247635|ref|XP_003272965.1| PREDICTED: elongator complex protein 3 [Nomascus leucogenys]
          Length = 547

 Score = 90.4 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 128/372 (34%), Gaps = 58/372 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D   
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL-- 394

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
              G   R           I      + +++VR++  A    E FLS E    + L+  L
Sbjct: 395 ---GTQCRDVRTREVGIQEIHHKVRPYQVELVRRDYVANGGWETFLSYEDPDQDILIGLL 451

Query: 336 RLREGISVKDWE 347
           RLR+  S + + 
Sbjct: 452 RLRK-CSEETFR 462


>gi|148704072|gb|EDL36019.1| elongation protein 3 homolog (S. cerevisiae), isoform CRA_a [Mus
           musculus]
          Length = 525

 Score = 90.4 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 129/365 (35%), Gaps = 66/365 (18%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              + +  V IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRSLHDALSGHTSNNIHEAIKYSERSFTKCVGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H    A  + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAACESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVTHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYRS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHS 284
            S +  +    L   I +        Y +     +   S                    S
Sbjct: 340 YSPSDLI---ELVARILALVPPWTRVYRVQRDIPMPLVS--------------------S 376

Query: 285 RVKVGSHR-VAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGIS 342
            V+ G+ R +A +  K     +++VR++  A    E FLS E    + L+  LRLR+  S
Sbjct: 377 GVEHGNLRELAFARMKDLGIQVELVRRDYVANGGWETFLSYEDPDQDILIGLLRLRK-CS 435

Query: 343 VKDWE 347
            + + 
Sbjct: 436 EETFR 440


>gi|18978273|ref|NP_579630.1| oxygen-independent coproporphyrinogen III oxidase [Pyrococcus
           furiosus DSM 3638]
 gi|18894094|gb|AAL82025.1| oxygen-independent coproporphyrinogen III oxidase [Pyrococcus
           furiosus DSM 3638]
          Length = 640

 Score = 90.4 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++       +GR H   E I A  L R
Sbjct: 288 VGLTIETRPDWAFERQIDRMLAFGTTRVELGVQTIFNFIHERVGRGHGVEEIIKATQLLR 347

Query: 166 NIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +       +     +  D L +Y   + +    Y  +K G
Sbjct: 348 DAGLKINYHIMPGLPGSNFERDLYVFKTIFEDPRFRPDMLKIYPTLVTRDAPLYAWYKAG 407

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   AV+L      I            +I +H  +      NL    + + +  G
Sbjct: 408 LYKPYTTEEAVELLVEAYKIFPKWVRVMRIQRDIPSHLIVAGVKHSNLGQLVFEELVRRG 467

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG            E  +K++R++  A    E FLS E   ++ L+  LR
Sbjct: 468 IRPREIRFREVGHQMQKFGKMPEIEH-IKLLREDYEAGEGTEIFLSFEDVKNDILIGFLR 526

Query: 337 LR 338
           LR
Sbjct: 527 LR 528


>gi|313673278|ref|YP_004051389.1| hypothetical protein Calni_1318 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940034|gb|ADR19226.1| conserved hypothetical protein [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 300

 Score = 90.4 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 13/197 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD +S V       ++ +   L  ++ + +    R +  I+F   + +    +    
Sbjct: 41  CIYCDNSSFVFTKGYSIKDQV---LKGIERLVKKGVNRFV--IYFQSYSNTYCNDEYF-- 93

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRF 147
            +D I ++      V I I   P  +     Q   +  ++R    +  G+QS  +++L+F
Sbjct: 94  -IDMIKESLIDDRIVGIFIGTRPDVINEKKLQFLTQL-IDRYDIFMEYGLQSAHDKTLKF 151

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+  +   A+ L ++   +++  LI  LP +T ++     +   S  +D +  + L
Sbjct: 152 INRGHSVDDFEKAVLLTKSFGLKITTHLILGLPYETKSEMIDSTKYVASLGIDAVKFHHL 211

Query: 208 TIEKGTLFYKMHKDGDL 224
            I KGT   +++    L
Sbjct: 212 HIVKGTKLAELYIKNQL 228


>gi|298675913|ref|YP_003727663.1| ELP3 family histone acetyltransferase [Methanohalobium evestigatum
           Z-7303]
 gi|298288901|gb|ADI74867.1| histone acetyltransferase, ELP3 family [Methanohalobium evestigatum
           Z-7303]
          Length = 547

 Score = 90.4 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 91/249 (36%), Gaps = 21/249 (8%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+ IT E  P      +     + G  ++ +GVQS+ +  L  + R H  ++   A  + 
Sbjct: 217 NIGITFETRPDWTNTQHIDRILELGATKVEIGVQSVYDFVLSRINRGHTVNDTAEANRML 276

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP     +     +R      +  D+L +Y   + +GT  YKM + 
Sbjct: 277 RDSGLKVGFHMMPNLPGMGYERELRGFERLFDDSRFMPDYLKIYPTLVTEGTELYKMWER 336

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEI-SNHSFLGAES-------LHNLNYW 270
           G+     ++ AV+L +  +++            +I S   F G             L   
Sbjct: 337 GEYTALDDDEAVELISDVKAMLPKWVRLQRIQRDIPSQQIFAGVRKSNIRQLARERLQEK 396

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
                         R +   H +   IE   E+    V         + FL+ E    + 
Sbjct: 397 GGK------CRCI-RCREVGHNILKGIEPSDENIEFTVESYNSCGGVEHFLAFEDVKQDI 449

Query: 331 LMMGLRLRE 339
           L+  LRLR 
Sbjct: 450 LIGFLRLRF 458


>gi|194380640|dbj|BAG58473.1| unnamed protein product [Homo sapiens]
          Length = 455

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 133/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 9   HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 67

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 68  HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 127

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 128 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 187

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 188 KVVAHMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 247

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 248 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 303

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 304 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 360

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 361 LRK-CSEETFR 370


>gi|257388239|ref|YP_003178012.1| histone acetyltransferase, ELP3 family [Halomicrobium mukohataei
           DSM 12286]
 gi|257170546|gb|ACV48305.1| histone acetyltransferase, ELP3 family [Halomicrobium mukohataei
           DSM 12286]
          Length = 576

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 108/312 (34%), Gaps = 23/312 (7%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P+    + F    P   +  +   + D I +
Sbjct: 187 TMTARSHDYQEWFVKRALEAMNDFDAGAQPQPAEDVSF-AEDP---DEYDFRYLEDVITE 242

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T    NV  T E  P   +        + G  ++ +GVQ+  E+  R + R H    +
Sbjct: 243 NETADVRNVATTFETKPDWCDPEQIDRMLRLGGTKVEVGVQTTYERINREMHRGHGVQAS 302

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTL 214
           + A    R+   ++ F ++   P  +      + +R      +  D+L +Y   + +GT+
Sbjct: 303 VDANRRLRDSAFKVGFHMMPGQPGMSKEMCLEDFRRIFEDSKWRPDYLKIYPTLVVEGTV 362

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHN---LN 268
            Y  ++  +      + A +L    +S+    +       +I      G     N   L 
Sbjct: 363 TYDWYRKDEFEPLDNDEAAELVAEIKSMIPKYTRLQRVQRDIPADFIEGGVWKSNLRQLA 422

Query: 269 YWRYGDYIGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
             R  +        H         R     ++ PE   K V     A   + F+S E   
Sbjct: 423 RQRMDE--------HGWTCDCIRCREVGMNDEDPERIEKDVLTYEAAGGTEHFISFEDPD 474

Query: 328 DEFLMMGLRLRE 339
            + L+   RLR 
Sbjct: 475 KDLLIGFCRLRF 486


>gi|34496243|ref|NP_900458.1| hypothetical protein CV_0788 [Chromobacterium violaceum ATCC 12472]
 gi|34102097|gb|AAQ58464.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 306

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 14/230 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  S       G+E    S   ++   ++ TG       +F   T +  E + +  
Sbjct: 45  CTFCDVRSF------GREAASLSIAEQIAREKEKTGRARKYLAYFQAYTSTYAEVETLRA 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + D       V+    + +   P  V     +    Y+  G      LG+Q+  +++   
Sbjct: 99  LYDEAMTAADVAG---LCVGTRPDCVPDAALDLLASYQAGGAEVWLELGLQTAHDRTQAR 155

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H  ++   A+  A     ++   LI  LP +        L+  L   V+ L L+ L
Sbjct: 156 IRRGHGLADYRDAVARAHARGLKVCAHLIAGLPGEDADDVHSTLRAVLDIGVEGLKLHPL 215

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            I +G+     ++ G++   S +    L       T    ++   IS  +
Sbjct: 216 MIVRGSRMAAQYRRGEVTPMSLDAYAGLAADLIRRTPPEIVYH-RISATA 264


>gi|296221671|ref|XP_002756851.1| PREDICTED: elongator complex protein 3 isoform 2 [Callithrix
           jacchus]
          Length = 503

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 135/377 (35%), Gaps = 56/377 (14%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +       +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPFQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWEMLAGRN 353
           LR+  S + ++ +A   
Sbjct: 453 LRK-CSEETFQRIAREE 468


>gi|327540150|gb|EGF26744.1| radical SAM domain protein [Rhodopirellula baltica WH47]
          Length = 416

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 75/235 (31%), Gaps = 10/235 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  S     ++  +        ++  +++          +F   T +      +  
Sbjct: 118 CNFCDNRSFSPSRRIRLQRVADQLTEQIGRVQKRYSDVRGYIAYFQPATNTYAPIDQLRE 177

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D      +    V + +   P  V  +     ++  V+    +  G+Q++ ++SL ++
Sbjct: 178 IFDLA--LNSDDRIVGLAVGTRPDCVPDSVLDLLQELAVDHDVSLEFGMQTVHDESLVWM 235

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ I AI  AR+        +I  +P++                 D + L+ L 
Sbjct: 236 NRAHTHADMINAIDRARDRGFECCSHIILGVPREDHAMMMESAAEIGRLGFDAIKLHNLY 295

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY--EISNHSFLGA 261
             +GT   +    G + +       D                    +S  +    
Sbjct: 296 SVRGTPLGEEVLAGKVEMMRRE---DYVQTVVDFLERVPPEVIVERVSGDAPPNY 347


>gi|326916715|ref|XP_003204650.1| PREDICTED: elongator complex protein 3-like [Meleagris gallopavo]
          Length = 534

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 122/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+     + ++Q
Sbjct: 86  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQ 144

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +              +++  V 
Sbjct: 145 LGHSVDKVEFIVMGGTFMALPEDYRDYFIRNLHDALSGHTSNNVAEAVKYSERSLTKCVG 204

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++ 
Sbjct: 205 ITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDA 264

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + LY   + +GT  Y++ K G  
Sbjct: 265 GFKVVAHMMPDLPNMGLERDIDQFVEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRY 324

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 325 KSYPPSTLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 381

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 382 -----GTQCRDVRTREVGIQEIHHKVRPYQIELIRRDYVANGGWETFLSYEDPEQDILIG 436

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 437 LLRLRK 442


>gi|290559091|gb|EFD92461.1| histone acetyltransferase, ELP3 family [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
 gi|326422585|gb|EGD71979.1| Histone acetyltransferase, ELP3 family [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 525

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 112/360 (31%), Gaps = 60/360 (16%)

Query: 28  CVK-KCPYCD----FN---SHVRRYKVGQENFIQSFLTEMQWMRQLT-------GPRSIS 72
           C    C +C     FN   S+       +   I ++    Q   +L+        P+ I 
Sbjct: 93  CPHGTCIFCPGGTKFNTPQSYTGFEPAARRALINNYDPYKQVNARLSHYLFMGYSPQKIE 152

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--------------------NVEITIEA 112
            I  GG   +L +   +  I +        +                      V    E 
Sbjct: 153 VIIIGGTFTTLPKDYVLKYITEIYRAMNEFNGEKVEGALEQQQKFNETASVRCVAFAAET 212

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P      + +     G+ R+ +GVQS+ ++ L    R H   + I +    +N   ++ 
Sbjct: 213 KPERCSNEDIERMLNFGITRVEMGVQSVYDEVLLRNNRGHTIHDVIDSTRRLKNYGYKVD 272

Query: 173 FDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
             ++  LP     + +  + +      +  D + LY   + +GT  Y+M K G      +
Sbjct: 273 HHIMLNLPFSDFDKDKETINQIYTNEDFKPDAIKLYPTLVIRGTGLYEMSKKGKYNPYPK 332

Query: 230 NVAVDLYNLTQ----SITSAHGLHAYEISNHSFLG------AESLHNLNYWRYGDYIGIG 279
              + L    +           +     S     G       + +      +        
Sbjct: 333 EDVIKLITEAEINAPRWLRIMRIERDIPSTFIDKGIKTTNLRQEVEESLVQKGK------ 386

Query: 280 PGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLR 338
               S            I K  +  +++ R+N  A    E FLS E   ++ L+  LRLR
Sbjct: 387 ---RSNDIRSREIGHTRISKPIK--IELKRENYRASRGDEIFLSFEDVNNDALIAFLRLR 441


>gi|313158314|gb|EFR57716.1| radical SAM protein, TIGR01212 family [Alistipes sp. HGB5]
          Length = 317

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 72/191 (37%), Gaps = 6/191 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  +    Y +  +   +     +++ R+     S   ++F   + +    + +  
Sbjct: 48  CTFCNNGAFTPSYCMPVKGVRRQIEEGIEFHRRRYRTASKYLVYFQSFSNTYAPLERLKE 107

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +      +  V+    I +   P  V+      + +    R   +  G++S  +++LR +
Sbjct: 108 VYGEALAHPDVAG---IVVGTRPDCVDAEKLDYFAELARGRYVAVEYGIESTRDETLRAV 164

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ + A  A+ +       +    I  LP +T      ++    S  +  L  +QL 
Sbjct: 165 NRGHDFACARRAVEMTAARGLHVGAHFILGLPGETDAMLLEQVAAINSLPLTTLKFHQLQ 224

Query: 209 IEKGTLFYKMH 219
           + +GT     +
Sbjct: 225 LFRGTAMAAEY 235


>gi|260775401|ref|ZP_05884298.1| hypothetical protein VIC_000775 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608582|gb|EEX34747.1| hypothetical protein VIC_000775 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 319

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   +S L +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEETQTKSILEQLKDRAGEVHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      +  +     +    +  V + +   P  V     +        G      L
Sbjct: 88  TSTY---AEVQTLKSMYEQAIKAADIVGLCVGTRPDCVPDAVLELLSGYVREGFEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+ +   +    AR +  ++   LI  LPK+T       +++ +
Sbjct: 145 GLQTANNDTLKRINRGHDFNCYASIAKRARALGIKVCTHLIVGLPKETHQDNIDTMRKVI 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  K G L  PS    VD  +    +T    +    +S+
Sbjct: 205 DVGTDGIKLHSLHIVEGSTMAKAWKAGKLNAPSLQQYVDTASAMIRMTPPEIVFH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|294494915|ref|YP_003541408.1| histone acetyltransferase, ELP3 family [Methanohalophilus mahii DSM
           5219]
 gi|292665914|gb|ADE35763.1| histone acetyltransferase, ELP3 family [Methanohalophilus mahii DSM
           5219]
          Length = 543

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 108/314 (34%), Gaps = 30/314 (9%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F +  L  M   +      S+ ++   G  P     +++    +  A 
Sbjct: 158 TFTSRNLDYQEWFTKRCLEAMNDFKGHQWRDSVHNV--YGYIP----IEDVQEANESSAV 211

Query: 99  NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
                 N+ IT E  P              G  ++ +GVQS+ +  L  + R H+ ++  
Sbjct: 212 R-----NIGITYETRPDWTSPVEVDRLLNFGATKVEIGVQSVYDFVLSRMRRGHSVADTA 266

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLF 215
            A  + R+   ++ F ++  LP     +     ++  S   +  D L +Y   + +GT  
Sbjct: 267 EANRILRDSGLKVGFHMMPRLPGSDNERDMRGFKKLFSDSRFMPDFLKIYPTLVTEGTEL 326

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL----- 267
            KM + G      +  AV+L    ++I            +I     L      N+     
Sbjct: 327 EKMWRAGKYDPLYDEEAVELLADIKAILPKWVRLQRIQRDIPAQQILAGVKKSNIRQLAG 386

Query: 268 --NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ 325
                + G           R +   H +        E    MV+       ++ FLS E 
Sbjct: 387 QQLMQKGGK-----CSCI-RCREVGHNILKERPPSIEDIEFMVQSYFSCGGQEHFLSFED 440

Query: 326 QADEFLMMGLRLRE 339
            + + L+  LRLR 
Sbjct: 441 VSQDILIGFLRLRF 454


>gi|294648243|ref|ZP_06725780.1| putative coproporphyrinogen III oxidase [Bacteroides ovatus SD CC
           2a]
 gi|292636431|gb|EFF54912.1| putative coproporphyrinogen III oxidase [Bacteroides ovatus SD CC
           2a]
          Length = 217

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 28/222 (12%)

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           M  +   L++AL +  + L +Y L + +GT   +           ++V   +Y   + + 
Sbjct: 1   MDSFLYSLEQALLFQPNELFIYPLYVRQGTAITEREP--------DDVCFRMYCAARDLL 52

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH--- 300
              G      S   F+   S            +  G G  S +    +    ++ +H   
Sbjct: 53  KDRGFLQ--TSMRRFIHHPSTDAEISCGDEVMLSCGSGGRSYLGHLHYATRYTVSQHCIA 110

Query: 301 --PESWL----KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL 354
              + ++      V +NG        LS E++   F++  L    G+   ++E   G + 
Sbjct: 111 GEIDDYMGTADFTVARNGF------ILSQEERRQRFIIKNLMYYMGLDKAEYERRFGESP 164

Query: 355 -DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            DI   R L  + +IE     R+  T  G+   D +   L +
Sbjct: 165 DDIPLFRQLAERQWIESTD-DRICLTSEGIGYSDYI-GQLFI 204


>gi|222054682|ref|YP_002537044.1| hypothetical protein Geob_1585 [Geobacter sp. FRC-32]
 gi|221563971|gb|ACM19943.1| conserved hypothetical protein [Geobacter sp. FRC-32]
          Length = 319

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 17/205 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQ-SFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C YCD NS            ++      M + R+  G      I+F  
Sbjct: 38  CPNRDGVRGTGGCIYCD-NSSFSPGGTVAAIPVEIQMAEGMAYHRKRLGSEKFI-IYFQK 95

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISL 135
            T +    + +  +      +  V   V I+I   P ++     +      +     + L
Sbjct: 96  FTNTYGPVEKLHDLYSRALAHPDV---VGISIGTRPDALSDPAIDLLTDLARTSYVCLEL 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS+++  L  + R H  ++ + A+         +   LI+  P ++   +    Q   
Sbjct: 153 GLQSMDDSILTQINRGHTLADYLQAVERVSGRGMDICTHLIHGFPGESSADFIRTAQLIS 212

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
           S  V+ L ++QL   K T   + + 
Sbjct: 213 SLPVNSLKIHQLHAVKDTRLAEWYY 237


>gi|323451696|gb|EGB07572.1| hypothetical protein AURANDRAFT_27185 [Aureococcus anophagefferens]
          Length = 601

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 20/187 (10%)

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNIALILDGIAKNWTVSSNVE 107
            + ++F  ++ +       R+          P  SL+E Q +             +  + 
Sbjct: 165 EYREAFCRDLYYAANTFWQRADK-------RPRRSLLEEQTLNE--------SAATKIIG 209

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +T+E  P +++ +  +  R  G  R+ LGVQ ++   L  + R H  +E   A+ L ++ 
Sbjct: 210 LTLETRPDTIDEDEIRLLRSYGCTRVQLGVQHVDAAVLDRVNRGHGRAETATALRLLKDA 269

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   L+  LP  T           L       D   +Y   +   T+  K   +G  
Sbjct: 270 CYKVDIHLMPNLPGATPAVDLAMFDAVLYDEDLQADQWKIYPCEVTPWTVIKKWFDEGSY 329

Query: 225 VLPSENV 231
           V  +E+ 
Sbjct: 330 VPYAEDA 336


>gi|212704048|ref|ZP_03312176.1| hypothetical protein DESPIG_02101 [Desulfovibrio piger ATCC 29098]
 gi|212672553|gb|EEB33036.1| hypothetical protein DESPIG_02101 [Desulfovibrio piger ATCC 29098]
          Length = 312

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 65/160 (40%), Gaps = 5/160 (3%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--SLGVQS 139
           +      +A +L+ +A    +     + +   P  ++          G++ +   LG+Q+
Sbjct: 91  TYGPASRLARLLEQVAA---LPGCRGVAVGTRPDCLDDEKLALLAGCGLDEVWLELGLQT 147

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +LR + R H A +A  A+  A +    +   L+  LP +    +   +  A+S  +
Sbjct: 148 CRDDTLRRINRGHTARQAEEAVRAALDAGLLVCGHLMAGLPGEDEKDFLHGVDWAVSLGM 207

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L L+ + + +GT   +  + G     + +  VD+    
Sbjct: 208 QGLKLHNVYVPQGTELARQWQAGGYRPLARDEYVDMLCAA 247


>gi|217974291|ref|YP_002359042.1| hypothetical protein Sbal223_3134 [Shewanella baltica OS223]
 gi|217499426|gb|ACK47619.1| conserved hypothetical protein [Shewanella baltica OS223]
          Length = 309

 Score = 90.0 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 91/250 (36%), Gaps = 23/250 (9%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F SH     +     ++   +  +  +         + +F
Sbjct: 33  CPNRDGTMGRGGCTFCNVASF-SHQTADVLSITEQLEQGKSRYREAKPQAQADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--- 133
              T +        +++    +       V + +   P  V  N          N +   
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLASYQANGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+ ++++LR + R H+ +     +  AR    ++   LI  LP +T + +   L 
Sbjct: 148 LELGLQTAQDETLRKINRGHDFACYCDTVSRARARGLKVCTHLILGLPDETHSDYMATLA 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHAY 251
             L   VD L L+ L + KG+   K  + G L L S E+ A  +  + +   +    H  
Sbjct: 208 AVLQQGVDGLKLHPLHVVKGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPAEVIFHR- 266

Query: 252 EISNHSFLGA 261
            ++ ++    
Sbjct: 267 -VTAYAKKPM 275


>gi|239905107|ref|YP_002951846.1| hypothetical protein DMR_04690 [Desulfovibrio magneticus RS-1]
 gi|239794971|dbj|BAH73960.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 334

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 68/167 (40%), Gaps = 5/167 (2%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQS 139
           +   P+ +A ++  +A    +     + +   P  +++        A V   R+ +G+QS
Sbjct: 109 TYGPPERLAALVAELATLPDIEG---LCLGTRPDCLDLEKIALLAAAPVGHVRLEMGLQS 165

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +LR +GR H  ++   A  +A +    ++  L+  LP + +  +   ++   +  +
Sbjct: 166 ANDATLRRIGRGHTTADFARATIMAADAGLAVTAHLMAGLPGEGVEDFLATVRFVAALPI 225

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             + L+   +  G+    +HK G     +    V+      ++   H
Sbjct: 226 AGVKLHNTLVVAGSGLAALHKAGGYQPMAREAYVEAVCRAIALLPGH 272


>gi|296221669|ref|XP_002756850.1| PREDICTED: elongator complex protein 3 isoform 1 [Callithrix
           jacchus]
          Length = 547

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 132/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 101 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 159

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 160 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 219

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 220 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGF 279

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 280 KVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 339

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 340 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +       +++VR++  A    E FLS E    + L+  LR
Sbjct: 396 IQCRDVRTREVGIQEIHHKVRPFQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 452

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 453 LRK-CSEETFR 462


>gi|32473425|ref|NP_866419.1| hypothetical protein RB4960 [Rhodopirellula baltica SH 1]
 gi|32398105|emb|CAD78200.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 369

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 71/202 (35%), Gaps = 5/202 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  S     ++  +        ++  +++          +F   T +      +  
Sbjct: 71  CNFCDNRSFSPSRRIRLQRVADQLTEQIGRVQKRYSDVRGYIAYFQPATNTYAPIDQLRE 130

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D      +    V + +   P  V  +     ++  V+    +  G+Q++ ++SL ++
Sbjct: 131 IFDLA--LNSDDRIVGLAVGTRPDCVPDSVLDLLQELAVDHDVSLEFGMQTVHDESLAWM 188

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ I AI  AR+        +I  +P++                 D + L+ L 
Sbjct: 189 NRAHTHADMINAIDRARDRGFECCSHIILGVPREDHAMMMESAVEIGRLGFDAIKLHNLY 248

Query: 209 IEKGTLFYKMHKDGDLVLPSEN 230
             +GT   +    G + +    
Sbjct: 249 SVRGTPLGEEVLAGKVEMMRRE 270


>gi|313681354|ref|YP_004059092.1| hypothetical protein Sulku_0225 [Sulfuricurvum kujiense DSM 16994]
 gi|313154214|gb|ADR32892.1| conserved hypothetical protein [Sulfuricurvum kujiense DSM 16994]
          Length = 320

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 29/256 (11%)

Query: 32  CPYC---DFNSHVRRYKVGQENFI----------QSFLTEMQWMRQLTGPRSISS----- 73
           C +C    F+  + R +  +  ++          +  L +++W  Q    R         
Sbjct: 44  CTFCENDSFSPSLDRARELKGFYLNLQSTSNPHLEKQLQQLEWQFQALSSRLSDENNAQK 103

Query: 74  --IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             ++F   T +    + +  + +   K  T  + V ++I     S+    F+        
Sbjct: 104 FLVYFQSFTNTYAPLETLKALYE---KALTFDNVVGLSIGTRSDSISDETFEYLADLSQK 160

Query: 132 R---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
               I  G+QS+ + +L  + R H+++    AI  A++    +   LI+ LP +T     
Sbjct: 161 TEIWIEFGIQSIYDTTLERINRGHDSANVKEAIRKAKSYGLNVCGHLIFGLPGETKEMML 220

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              + A +  +D +  + L + K T     +  G+     E + +++      +     +
Sbjct: 221 ETAKEAYALGIDSVKYHPLYVVKRTALANEYARGEFEPIDEELYLEVLREAI-VLKPSHV 279

Query: 249 HAYEISNHSFLGAESL 264
               IS  + +G ESL
Sbjct: 280 SVQRIS--AGIGDESL 293


>gi|153834481|ref|ZP_01987148.1| radical SAM protein, family [Vibrio harveyi HY01]
 gi|148869117|gb|EDL68153.1| radical SAM protein, family [Vibrio harveyi HY01]
          Length = 314

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 84/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E  I+S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEEVQIKSIHDQLKDRAGEIHRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           + +   +    +  V + +   P  V            VN+     + LG+Q+    +L+
Sbjct: 97  LKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDY-VNQGYEIWLELGLQTANNDTLK 155

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+          AR +   +   LI  LPK+T       L++ L    D + L+ 
Sbjct: 156 RINRGHDFECYAEITKRARALGINVCTHLIVGLPKETRDDNIETLRKVLEVGTDGIKLHG 215

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           L I +G+   K  + G L  P     V + +    +T    ++   +S+ + 
Sbjct: 216 LHIVEGSTMAKAWRAGKLEAPELEEYVAIASEMIRMTPKEVIYH-RVSSAAR 266


>gi|24372904|ref|NP_716946.1| hypothetical protein SO_1326 [Shewanella oneidensis MR-1]
 gi|24347033|gb|AAN54391.1|AE015577_1 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 309

 Score = 89.6 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 91/248 (36%), Gaps = 23/248 (9%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F S+ ++  +     +Q      +  +         + +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASF-SYQQKETLSISEQLQQGKARYKEAKPKLNADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +        +++    +    S  V + +   P  V  N           GV+  
Sbjct: 91  QAYTSTY---DEYQVLMSKYDEAVKDSEIVGLCVGTRPDCVPDNVLDLLASYQHKGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  +++L  + R HN +     +  AR+   ++   LI  LP +T   +   LQ
Sbjct: 148 LELGLQTANDKTLHHINRGHNFACYCDTVSRARSRGLKVCTHLILGLPGETPLDYMATLQ 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-AVDLYNLTQSITSAHGLHAY 251
             L+  VD L L+ L + +G+   K+ + G L L +    A     L +        H  
Sbjct: 208 AVLAQGVDGLKLHPLHVVEGSTMAKVWRAGRLPLLTMEAYAASAGELIRHTPKEIIFHR- 266

Query: 252 EISNHSFL 259
            ++ ++  
Sbjct: 267 -VTAYAKK 273


>gi|148979752|ref|ZP_01815689.1| hypothetical protein VSWAT3_08306 [Vibrionales bacterium SWAT-3]
 gi|145961635|gb|EDK26934.1| hypothetical protein VSWAT3_08306 [Vibrionales bacterium SWAT-3]
          Length = 317

 Score = 89.6 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  +QS   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEQTQVQSIAEQLKDRAGEIARAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  + +   K    +  V + +   P  V         GY + G      L
Sbjct: 88  TSTYAEVQVLKNMYEEALKAPG-ADIVGLCVGTRPDCVPDSVLELLAGYVEKGYEIWLEL 146

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+ +        AR +  ++   LI  LPK+T       L + L
Sbjct: 147 GLQTANNSTLKRINRGHDFAVYETITQRARALGIKVCTHLIVGLPKETKADNLETLDKVL 206

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  K G L  PS    +D+       T A  ++   +S+
Sbjct: 207 AVGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEYIDIATDIIQRTPADVVYH-RVSS 265

Query: 256 HSF 258
            + 
Sbjct: 266 AAR 268


>gi|325188265|emb|CCA22804.1| elongator complex protein putative [Albugo laibachii Nc14]
          Length = 657

 Score = 89.6 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 65/225 (28%), Gaps = 37/225 (16%)

Query: 32  CPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C YC            D  S +R  +   +  +Q     +           I  +  GG 
Sbjct: 171 CYYCPNEPDQPRSYLHDEPSVLRANRNEFDPVLQFCDRAITLAMNGHPVDKIELLVLGGT 230

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSN----------------------VEITIEANPSSV 117
             S         + D      T                          + IT+E  P  +
Sbjct: 231 WSSYPHEYQEMFMRDLFYAANTFYQREKRAKGTLDEEKLENETAAVKIIGITLETRPDCI 290

Query: 118 EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
                + +R  G  R+ LG+Q  ++  L  + R     +AI A+ L R+   +    L+ 
Sbjct: 291 TPEEIRRFRWYGCTRVQLGIQHTDDGILTKINRGCTTEDAIKAMKLLRDCCYKTDIHLMP 350

Query: 178 ALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMH 219
            LP  T           L       D   +Y   I   T+  K H
Sbjct: 351 NLPGSTPEMDRQMFDYVLNSSQLQADQWKIYPCEITPWTVIKKWH 395


>gi|146292240|ref|YP_001182664.1| putative radical SAM protein [Shewanella putrefaciens CN-32]
 gi|145563930|gb|ABP74865.1| conserved hypothetical radical SAM protein [Shewanella putrefaciens
           CN-32]
          Length = 309

 Score = 89.6 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 86/249 (34%), Gaps = 21/249 (8%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F SH     +     ++   +  +  +         + +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASF-SHQTADVLSITEQLEQGKSRYREAKPQAQADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +        +++    +       V + +   P  V  N      +    GV+  
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLARYQADGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  +++LR + R H+ +     +  AR    ++   LI  LP +T + +   L 
Sbjct: 148 LELGLQTANDETLRRINRGHDFACYCDTVSRARARGLKVCTHLILGLPNETHSDYMATLA 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L   VD L L+ L I +G+   K  + G L L S              T    +    
Sbjct: 208 AVLQQGVDGLKLHPLHIVEGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPQEVIFH-R 266

Query: 253 ISNHSFLGA 261
           ++ ++    
Sbjct: 267 VTAYAKKPM 275


>gi|330507860|ref|YP_004384288.1| histone acetyltransferase, ELP3 family protein [Methanosaeta
           concilii GP-6]
 gi|328928668|gb|AEB68470.1| histone acetyltransferase, ELP3 family protein [Methanosaeta
           concilii GP-6]
          Length = 515

 Score = 89.6 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 106/308 (34%), Gaps = 30/308 (9%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+  T E  P      + +   + G  ++ LGVQSL+E  L  + R H   +A  A    
Sbjct: 201 NIGTTFETRPDWCRPRDIEEMLRLGATKVELGVQSLDEDLLVRMKRGHKVEDAAQASANL 260

Query: 165 RNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R    ++ F ++  LP  +         EL     +  D+L +Y   + +GT  Y+ +  
Sbjct: 261 REAGLKVGFHMMPGLPGSSPDLDLAVFRELFSDSRFRPDYLKIYPTLVIEGTELYRQYLR 320

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHN---LNYWRYGDY 275
           G+     ++ A +L +  +     +        +I +   +      N   L   R  D 
Sbjct: 321 GEYTPLGDDDAAELVSRIKETLPRYVRLQRVQRDIPSPLIVAGVKKSNLRQLAKKRLEDR 380

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHP-ESWLKMVRKNGHAVVEKE----------FLSSE 324
            G         + G  RV  +  +   ES++    +      E E           LS+ 
Sbjct: 381 -GSSCRCIRCREAGLRRVVQAEPRLVHESYIASGAREHFLSFESEDDVLVGFLRLRLSTS 439

Query: 325 QQADEFLMMGLRLREGISVKDWEML-AGRNLDIECERNLQRQG--FIERVQF----SRLR 377
            +  E  + G  +  G     W+    G  L    ER  Q  G   IE           R
Sbjct: 440 ARVRELHVYGPMVPIGKRKDGWQHRGYGARLMEAAERLAQEAGYPLIEVTSGIGARGYYR 499

Query: 378 CTQRGMTM 385
             +RG  +
Sbjct: 500 --RRGYDL 505


>gi|293394243|ref|ZP_06638543.1| radical SAM protein [Serratia odorifera DSM 4582]
 gi|291423221|gb|EFE96450.1| radical SAM protein [Serratia odorifera DSM 4582]
          Length = 309

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 80/232 (34%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   Q+   ++               +F   T +  E   +  
Sbjct: 45  CTFCNVASFA-----DEQMRRQTIAEQLAAQAGKVNRAKRYLAYFQAYTSTYAEVALLES 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +   +   V I +   P  V     +   GYR  G      LG+Q+  +++L+ 
Sbjct: 100 LYRQALEQANM---VGICVGTRPDCVPEAALDLLAGYRAQGYEVWLELGLQTAHDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+          AR    ++   LI  LP +T       L   ++  VD + L+ L
Sbjct: 157 INRGHDFCCYQQTARRARERGLKVCCHLIVGLPGETPADHLATLVAVVAAGVDGIKLHPL 216

Query: 208 TIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            +  G++  +        VL  E+ A     + +        H   +S ++ 
Sbjct: 217 QVVAGSILARAWQAGRQPVLTLEDYAASAGEMIRHTPRDVVFHR--LSAYAR 266


>gi|50310033|ref|XP_455030.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644165|emb|CAH00117.1| KLLA0E23937p [Kluyveromyces lactis]
          Length = 561

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 124/375 (33%), Gaps = 59/375 (15%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIEQLKQ 166

Query: 65  LTGPRSISSIFFGGGTPSLIE----PQNIALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + +                   +++  V 
Sbjct: 167 LGHSIDKVEYIIMGGTFMSLPKDYREDFIVKLHNALSGFNGNDIDEAIQYSQQSLTKCVG 226

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQSL E   R   R H          +A++ 
Sbjct: 227 ITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVQSVCETFAVAKDA 286

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 287 GYKIVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYELWKTGRY 346

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
              + N  VDL     ++        Y +          S +   +L  L   R  D+  
Sbjct: 347 KSYNANALVDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVDNGNLRELALARMKDF-- 403

Query: 278 IGPGAHSRVKVGSHRVAISI-EKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
              G  SR           +  K     ++++R++ +A    E FLS E    + L+  L
Sbjct: 404 ---GTTSRDVRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYEDPKQDILIGLL 460

Query: 336 RLREGISVKDWEMLA 350
           RLR+      +    
Sbjct: 461 RLRKASKKYTYRKEF 475


>gi|113971205|ref|YP_734998.1| putative radical SAM protein [Shewanella sp. MR-4]
 gi|113885889|gb|ABI39941.1| conserved hypothetical radical SAM protein [Shewanella sp. MR-4]
          Length = 309

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 21/247 (8%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F+          E   Q      +   +L   + I+  +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASFSYQQAETLSISEQLRQGKARYKEAKPKLNADKFIA--YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +        +++    +    S  V + +   P  V  N           GV+  
Sbjct: 91  QAYTSTY---DEYQMLMAKYDEAVKDSEIVGLCVGTRPDCVPDNVLDLLASYQQKGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  + +L  + R H+ +     +  AR+   ++   LI  LP +T   +   LQ
Sbjct: 148 LELGLQTANDSTLHKINRGHDFACYCDTVARARSRGVKVCTHLILGLPGETHLDYMATLQ 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L+  VD L L+ L + +G+   K  + G L L S              T    +    
Sbjct: 208 AVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLPLLSIEEYAACVGELVRHTPKEVIFH-R 266

Query: 253 ISNHSFL 259
           ++ ++  
Sbjct: 267 VTAYAKK 273


>gi|288933359|ref|YP_003437418.1| hypothetical protein Kvar_0476 [Klebsiella variicola At-22]
 gi|288888088|gb|ADC56406.1| conserved hypothetical protein [Klebsiella variicola At-22]
          Length = 319

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 83/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 53  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 104

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V     +    Y + G      LG+Q+  +++L  
Sbjct: 105 LRSMYRQAISQANIVGLCVGTRPDCVPEAVLDLLSEYHEQGYEVWLELGLQTAHDKTLHR 164

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +T       L+R ++  VD + L+ L
Sbjct: 165 INRGHDFACYQRTARLARARGLKVCAHLIVGLPGETQGHCLETLERVVATGVDGIKLHPL 224

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 225 HIVKGSIMAKAWQAGRLNGIELEAYTVTAGEMIRYTPPEVIYH-RISASAR 274


>gi|291514881|emb|CBK64091.1| radical SAM protein, TIGR01212 family [Alistipes shahii WAL 8301]
          Length = 323

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 72/191 (37%), Gaps = 6/191 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  +    Y +  ++  Q     +++ R          ++F   + +    + +  
Sbjct: 49  CTFCNNGAFTPSYCMPSKSVGQQIAEGIEFHRNRYRSAQRYLVYFQAFSNTYAPLERLKR 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + D    +  V+    I +   P  V+      +     +R   +  G++S  + +LR +
Sbjct: 109 LYDEALAHPGVAG---IVVGTRPDCVDERKLDYFAGLARDRYVALEYGIESTFDATLRAV 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ + A  A+ +       +    I  LP +T      +++R  +  +  +  +QL 
Sbjct: 166 NRGHDFACARRAVEMTAARGLHVGAHFILGLPGETDAMLLDQVERINALPLTTVKFHQLQ 225

Query: 209 IEKGTLFYKMH 219
           + + T     +
Sbjct: 226 VFRATPMAAEY 236


>gi|19173436|ref|NP_597239.1| similarity to HYPOTHETICAL PROTEIN YB36_METJA [Encephalitozoon
           cuniculi GB-M1]
 gi|19171025|emb|CAD26415.1| similarity to HYPOTHETICAL PROTEIN YB36_METJA [Encephalitozoon
           cuniculi GB-M1]
          Length = 613

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 78/397 (19%), Positives = 135/397 (34%), Gaps = 70/397 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSF------LTEMQWMRQL 65
           C         C YC      DF     S+              +         ++ ++ L
Sbjct: 140 CPHIALTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFEQARERLRQLKAL 199

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNW-------------TVSSNVEI 108
                       GGT   +      + I+ + D ++ +                   V I
Sbjct: 200 GHNTDKVEYIIMGGTFMSLPESYRDRFISRLHDALSGHTSPTVEEAIRVGAEGRLKCVGI 259

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  RI +GVQS+ E   R   R H       +  LA++  
Sbjct: 260 TIETRPDFCVRPHLSKMLGYGCTRIEVGVQSVYEDVARDTNRGHTVESVCESFALAKDAG 319

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + KGT  +++ K+    
Sbjct: 320 FKIVAHMMPNLPNVPMKRDLAQFREYFDNPGFRSDGLKIYPTLVIKGTGLFELWKNNKYR 379

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
             S +  +   +L   I S     +  Y +          S +   ++  L   R  DY 
Sbjct: 380 NYSPDELI---DLLARILSLVPPWMRIYRVQRDIPMTLVSSGVEHGNIRELALARMKDY- 435

Query: 277 GIGPGAHSRVKVGSHRVA--ISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
                  +R +    R     +I ++  PE  +++VR++  A    E FLS E    + L
Sbjct: 436 ------RTRCRDIRTREVGIRNIHENILPEE-VELVRRDYVANKGWETFLSYEDVKQDIL 488

Query: 332 MMGLRLREGISVKDWE-MLAGRNLDIEC-ERNLQRQG 366
           +  LRLR+  SV  +   L G  L     E +L+  G
Sbjct: 489 IGLLRLRK-CSVDTFRTELRGLGLQPAANEGSLEADG 524


>gi|84393235|ref|ZP_00991997.1| hypothetical protein V12B01_08547 [Vibrio splendidus 12B01]
 gi|84376141|gb|EAP93027.1| hypothetical protein V12B01_08547 [Vibrio splendidus 12B01]
          Length = 317

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 19/243 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  IQS   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASF-----SDEQTQIQSIADQLKDRAGEIARAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  + +   K    ++ V + +   P  V         GY K G      L
Sbjct: 88  TSTYAEVQVLKNMYEEALKAPG-ANIVGLCVGTRPDCVPDSVLELLSGYVKQGYEIWLEL 146

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +        AR +  ++   LI  LPK+T       L + L
Sbjct: 147 GLQTANDKTLKRINRGHDFAVYETITRRARALGIKICTHLIVGLPKETKADNLETLDKVL 206

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  K G L  PS    +D+       T A+ ++   +S+
Sbjct: 207 AVGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEYIDIATEVIQRTPANVVYH-RVSS 265

Query: 256 HSF 258
            + 
Sbjct: 266 AAR 268


>gi|218264406|ref|ZP_03478263.1| hypothetical protein PRABACTJOHN_03959 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222009|gb|EEC94659.1| hypothetical protein PRABACTJOHN_03959 [Parabacteroides johnsonii
           DSM 18315]
          Length = 108

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 55/98 (56%)

Query: 48  QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE 107
           +E ++ + + EMQ  ++  G   + +I+FGGGTPS ++  +   I   I   + +SS  E
Sbjct: 4   KEPYVSAVIREMQLRQEYIGGEPLDTIYFGGGTPSQLQQADFERIFKTIDCLFNISSCKE 63

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           IT+EANP  +        R    NR+S+GVQS +E+ L
Sbjct: 64  ITLEANPDDMTPEYVASLRNLPFNRVSMGVQSFKEKDL 101


>gi|86147381|ref|ZP_01065694.1| hypothetical protein MED222_00962 [Vibrio sp. MED222]
 gi|85834809|gb|EAQ52954.1| hypothetical protein MED222_00962 [Vibrio sp. MED222]
          Length = 317

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  +QS   ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEQTQVQSIADQLTDRAGEIARAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  + +   K    +  V + +   P  V         +    G      L
Sbjct: 88  TSTYAEVQVLKNMYEEALKAPG-AEIVGLCVGTRPDCVPDAVLDLLAEYVKQGYEIWLEL 146

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +        AR +  ++   LI  LPK+T       L + L
Sbjct: 147 GLQTANDKTLKRINRGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLDKVL 206

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  K G L  PS    +D+ +     T A  ++   +S+
Sbjct: 207 AAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEYIDIASEIIQRTPADVVYH-RVSS 265

Query: 256 HSF 258
            + 
Sbjct: 266 AAR 268


>gi|218780477|ref|YP_002431795.1| hypothetical protein Dalk_2634 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761861|gb|ACL04327.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 310

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 81/237 (34%), Gaps = 21/237 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
           C  +        C YC+     R    G  +   S   +++  +   G R        +F
Sbjct: 36  CPNRDGTLGVGGCIYCN----ERGSGTGAASQGLSITQQIERGKGTYGKRYKAKKFLAYF 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +    + +  +     +  +V   V + I   P  V+ +      K   +    +
Sbjct: 92  QAHTNTYAPVERLEAL---YREALSVPDVVGLCIGTRPDCVDDDVLALLEKLAADHMIWV 148

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
             G+QS  +++LR + R H+A+     +             +I  LP +T        + 
Sbjct: 149 EYGLQSSCDKTLRIINRGHDAACFAETVKKTAGRNILTCAHVILGLPGETREDMLETARF 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  VD + ++ L + +GT  ++M++ G      +   V+       +     +  
Sbjct: 209 IGALPVDGVKIHLLYVIRGTALHRMYEQGRYQCMEQEDYVETVCRFIELLPPDMIIQ 265


>gi|239618120|ref|YP_002941442.1| hypothetical protein Kole_1752 [Kosmotoga olearia TBF 19.5.1]
 gi|239506951|gb|ACR80438.1| conserved hypothetical protein [Kosmotoga olearia TBF 19.5.1]
          Length = 305

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 86/244 (35%), Gaps = 18/244 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  K        C YCD  +       GQ++  +  L  ++ +R           +F   
Sbjct: 32  CPNKNGTKGRGGCIYCD-PTGSGFSVDGQKSIREQMLERIEKLRA--KGIKKYMAYFQAN 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRISLG 136
           + +    + +  + D           V + +   P        +     ++     I  G
Sbjct: 89  SNTYAPVKKLKELYDSAIS----DDIVILDVSTRPDLASEETLELLESYKEKLDVIIEFG 144

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+    +L+ L R H  +E I A+  A+     +   +I  LP  TMT      +   +
Sbjct: 145 LQTANFWTLKKLNRGHTLAEFIDAVIRAKKHGLEVVAHVIVNLPWDTMTDVIETAKILSA 204

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +VD + ++ L + +GT   KM+K G + +   +  ++             +    +++ 
Sbjct: 205 LSVDGVKIHSLYVVEGTALGKMYKKGLIQICDLHEYIERVITFLEFLDPEIVIHRLVADP 264

Query: 257 SFLG 260
              G
Sbjct: 265 PKEG 268


>gi|114048443|ref|YP_738993.1| putative radical SAM protein [Shewanella sp. MR-7]
 gi|113889885|gb|ABI43936.1| conserved hypothetical radical SAM protein [Shewanella sp. MR-7]
          Length = 309

 Score = 89.2 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 87/247 (35%), Gaps = 21/247 (8%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F+          E   Q      +   +L   + I+  +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASFSYQQAETLSISEQLRQGKARYKEAKPKLNADKFIA--YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +        +++    +    S  V + +   P  V  N           GV+  
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDSEIVGLCVGTRPDCVPDNVLDLLASYQQKGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  +++L  + R H+ +     +  AR+   ++   LI  LP +T   +   LQ
Sbjct: 148 LELGLQTANDKTLHKINRGHDFACYCNTVARARSRGLKVCTHLILGLPGETHLDYMATLQ 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L+  VD L L+ L + +G+   K  + G L L S              T    +    
Sbjct: 208 AVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLPLLSIEEYAACVGELVRHTPKEVIFH-R 266

Query: 253 ISNHSFL 259
           ++ ++  
Sbjct: 267 VTAYAKK 273


>gi|297526821|ref|YP_003668845.1| histone acetyltransferase, ELP3 family [Staphylothermus hellenicus
           DSM 12710]
 gi|297255737|gb|ADI31946.1| histone acetyltransferase, ELP3 family [Staphylothermus hellenicus
           DSM 12710]
          Length = 498

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/362 (16%), Positives = 125/362 (34%), Gaps = 53/362 (14%)

Query: 25  WPFCVKKCPYCD----FN---SHVRRYKVGQEN-------FIQSFLTEMQWMRQLTGPRS 70
            P C   C YC     +N   S+       +         + Q +   +Q+      P  
Sbjct: 48  IP-CPFNCYYCPGGPEYNAPKSYFGNEPALRRARRNQFHPYKQVWNRLLQYEYLKQVPSK 106

Query: 71  ISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSS-------------------N 105
           +  I  GG   + +  +       I +I + + +    +                     
Sbjct: 107 VEIIVMGG---TFLAARQRYKEWFITMIFEALNRYPDPNPPRKWDLESAQLRNETANHRC 163

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  R+ LGVQS+ +  L  + R H  +E+I +  + +
Sbjct: 164 VGLTIETRPDYGYEKHADEMLYYGATRVELGVQSIYDDVLLRVNRGHGVAESIKSTRILK 223

Query: 166 NIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  LP        +   E+     +  D L +Y   + +GT+ Y+  ++G
Sbjct: 224 DAGFKIVYHIMLGLPGSDPDRDIEMMKEIFENPDFRPDMLKIYPTEVVEGTVLYQWWREG 283

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                 +  A+++ +        +        +I     +      NL  +     +  G
Sbjct: 284 RYKPYDDETAIEVISEMYRYIPKYVRVMRIRRDIPAPEVVAGTKKSNLREYVEKRCMEKG 343

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE-KEFLSSEQQADEFLMMGLR 336
           I        +VG           P+  +++ R    A    +EFL+ E   ++ ++  LR
Sbjct: 344 IKINEIRFREVGLQAWKYGRIPDPKH-IEITRTTYEASGGIEEFLAVEDTRNDIIIGFLR 402

Query: 337 LR 338
           +R
Sbjct: 403 MR 404


>gi|327286268|ref|XP_003227853.1| PREDICTED: elongator complex protein 3-like [Anolis carolinensis]
          Length = 547

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 72/387 (18%), Positives = 130/387 (33%), Gaps = 66/387 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+     + ++Q
Sbjct: 99  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQ 157

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   +++  + 
Sbjct: 158 LGHSVDKVEFIVMGGTFMALAEEYRDYFIRNLHDALSGHTSNSVAEAVRYSERSLTKCIG 217

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++ 
Sbjct: 218 ITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDA 277

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + LY   + +GT  Y++ K G  
Sbjct: 278 GFKVVAHMMPDLPNMGLERDIDQFVEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRY 337

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 338 KSYPPSTLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 394

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 395 -----GTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANSGWETFLSYEDPEQDILIG 449

Query: 334 GLRLREGISVKDW--EMLAGRNLDIEC 358
            LRLR+  S + +  E+ AG ++  E 
Sbjct: 450 LLRLRK-CSEETFRAELKAGVSIVREL 475


>gi|117921487|ref|YP_870679.1| putative radical SAM protein [Shewanella sp. ANA-3]
 gi|117613819|gb|ABK49273.1| conserved hypothetical radical SAM protein [Shewanella sp. ANA-3]
          Length = 309

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 87/247 (35%), Gaps = 21/247 (8%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F S+ +   +     ++      +  +         + +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASF-SYQQAETLSISEQLEQGKARYKEAKPKLNADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +        +++    +    S  V + +   P  V  N           GV+  
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDSEIVGLCVGTRPDCVPDNVLDLLASYQQKGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  +++L  + R H+ +     +  AR+   ++   LI  LP +T   +   LQ
Sbjct: 148 LELGLQTANDRTLHKINRGHDFACYCDTVARARSRGLKVCTHLILGLPGETHLDYMATLQ 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L+  VD L L+ L + +G+   K  + G L L S              T    +    
Sbjct: 208 AVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLPLLSIEEYAACVGELVRHTPKEVIFH-R 266

Query: 253 ISNHSFL 259
           ++ ++  
Sbjct: 267 VTAYAKK 273


>gi|317494013|ref|ZP_07952429.1| SAM protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917786|gb|EFV39129.1| SAM protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 300

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        Q     S   ++    +     +    +F   T +      +  
Sbjct: 45  CTFCNVASFADEQMQRQ-----SIAEQLAAQARKVNRANRYLAYFQAYTSTY---AEVCT 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + +   +    +  V I +   P  V     +    YR  G      LG+QS ++++L+ 
Sbjct: 97  LKNMYEEALQQADMVGICVGTRPDCVPDSVLDLLSEYRDKGYEVWLELGLQSAQDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   +    L++ ++  VD + L+ L
Sbjct: 157 INRGHDFTCYQKTTRAARERGLKVCSHLIVGLPGEGKEECMRTLEQVVNTGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G+   K  + G L  LP          + +        H   IS  + 
Sbjct: 217 HIVTGSTMAKAWQAGRLRELPLTEYVTIAGEMIRHTPMDIVYHR--ISASAR 266


>gi|91095161|ref|XP_968028.1| PREDICTED: similar to elongation protein 3 homolog [Tribolium
           castaneum]
 gi|270015780|gb|EFA12228.1| hypothetical protein TcasGA2_TC004103 [Tribolium castaneum]
          Length = 591

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 129/365 (35%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVE 107
           L            GGT   +        I  + D ++ + + S               + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMSLPEDYRDYFIRNLHDALSGHKSSSVEEAVKYSERSNTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H         +LA++ 
Sbjct: 220 ITIETRPDYCLQKHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFNLAKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKVVSHMMPDLPNVDLERDIEQFIEFFENPNFRADGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L  +I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSILV---DLIANILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALQRMKD- 395

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        +VG   +   +  +    ++++R++ +A    E FLS E    + L+  
Sbjct: 396 LGLRCRDVRTREVGITEIHEKVRPND---VELIRRDYYANGGWETFLSYEDPEQDILIGL 452

Query: 335 LRLRE 339
           LRLR+
Sbjct: 453 LRLRK 457


>gi|254507472|ref|ZP_05119606.1| radical SAM protein [Vibrio parahaemolyticus 16]
 gi|219549542|gb|EED26533.1| radical SAM protein [Vibrio parahaemolyticus 16]
          Length = 314

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  I+S   ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEDAQIKSIHEQLTDRAGEISRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V     +        G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPEAVLELLSDYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L + L
Sbjct: 145 GLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESREDNISTLDKVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  K G L  P  +  V + +    +T  + ++   +S+
Sbjct: 205 QVGTDGIKLHGLHIVEGSTMAKAWKAGRLQAPELDEYVAIASEMIRLTPPNVIYH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|269103461|ref|ZP_06156158.1| hypothetical protein VDA_002887 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163359|gb|EEZ41855.1| hypothetical protein VDA_002887 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 309

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 90/244 (36%), Gaps = 21/244 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+    V  +   +  F+     ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCN----VASFADEKAQFLP-IHEQLTQRAGEVNRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  + +   +   +   V + +   P  V     +   GYR+ G      L
Sbjct: 88  TSTYAEVQTLKKMYEEALQAADI---VGLCVGTRPDCVPDAVLDLLAGYREQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +        AR +  ++   LI  LP  T       ++R +
Sbjct: 145 GLQTANDKTLKRINRGHDFACYAEITRRARALGIKVCTHLIVGLPGDTKQDNLETIKRVV 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VD + L+ L + +G+   +  K G +   S +   D+ +    +T    ++   +S 
Sbjct: 205 EVGVDGIKLHPLHLVEGSKLGQAWKAGRIEEVSLDQYSDIASEMIRLTPPDVVYH-RVSA 263

Query: 256 HSFL 259
            +  
Sbjct: 264 SARK 267


>gi|206577866|ref|YP_002236375.1| radical SAM protein, TIGR01212 family [Klebsiella pneumoniae 342]
 gi|290511590|ref|ZP_06550959.1| radical SAM protein [Klebsiella sp. 1_1_55]
 gi|206566924|gb|ACI08700.1| radical SAM protein, TIGR01212 family [Klebsiella pneumoniae 342]
 gi|289776583|gb|EFD84582.1| radical SAM protein [Klebsiella sp. 1_1_55]
          Length = 311

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 83/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V     +    Y + G      LG+Q+  +++L  
Sbjct: 97  LRSMYRQAISQANIVGLCVGTRPDCVPEAVLDLLSEYHEQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +T       L+R ++  VD + L+ L
Sbjct: 157 INRGHDFACYQRTARLARARGLKVCAHLIVGLPGETQGHCLETLERVVATGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 217 HIVKGSIMAKAWQAGRLNGIELEAYTVTAGEMIRHTPPEVIYH-RISASAR 266


>gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 614

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       R   G      S    ++    L     +S ++    T +    +
Sbjct: 175 CPFRCSFC----FDARGDHGVRTMAFS---RLEQELALFVKHRVSQVWVLDSTFNY-PAE 226

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L  I +   V+ ++   +EA    ++    Q   +   + + +G+QS     +R 
Sbjct: 227 RGKKLLRLIKR---VAPHLHFHLEAKIEFIDEELAQLLSEIHCS-VQIGLQSANPDVVRH 282

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R+ +A      I L          DL+Y LP          L+  L    +H+ L+ L
Sbjct: 283 VHRHFDAELFQEKIALLHFAEVTYGIDLMYGLPGDDEAGMRHSLEFVLQLQPNHIDLFPL 342

Query: 208 TIEKGTLFYKMHKDGDLV 225
            +  GT  Y  H    L 
Sbjct: 343 AVLPGTELYHQHSQYGLH 360


>gi|170725584|ref|YP_001759610.1| putative radical SAM protein [Shewanella woodyi ATCC 51908]
 gi|169810931|gb|ACA85515.1| conserved hypothetical radical SAM protein [Shewanella woodyi ATCC
           51908]
          Length = 312

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 86/245 (35%), Gaps = 22/245 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC  N     Y+ G E    S   ++   R+    R+   I +   
Sbjct: 33  CPNRDGTLGRGGCTYC--NVASFSYEHGTEL---SIPEQLNKGRERFAGRTSKYIAYFQA 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEV---NNFQGYRKAGVNRI-S 134
             S  +      +L        +  ++  + +   P  V         GY+  G++    
Sbjct: 88  YTSTYDE---YKVLKAKYDEAIIDPDIVGLCVGTRPDCVSDDVIELLAGYQARGIDVWLE 144

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS  +++L+ + R H  ++ +  +  AR    ++   LI  LP +    +   L   
Sbjct: 145 LGLQSASDKTLKRINRGHTLADYLDTVTRARAKGIKVCTHLILGLPGEEHQDYLNSLHAV 204

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L   VD L L+ L I +G+   K  +   + L S              T    +    ++
Sbjct: 205 LQAGVDGLKLHPLHIVEGSTMAKAWRSSRISLLSMEDYAYSVGEMIRYTPKEIIFH-RVT 263

Query: 255 NHSFL 259
            ++  
Sbjct: 264 AYAKK 268


>gi|120599824|ref|YP_964398.1| putative radical SAM protein [Shewanella sp. W3-18-1]
 gi|120559917|gb|ABM25844.1| conserved hypothetical radical SAM protein [Shewanella sp. W3-18-1]
          Length = 309

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 21/249 (8%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F SH     +     ++   +  +  +         + +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASF-SHQTADVLSITEQLEQGKSRYREAKPQAQADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI 133
              T +        +++    +       V + +   P  V  N      +    GV+  
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLARYQADGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+  +++LR + R H+ +     +  AR    ++   LI  LP +T   +   L 
Sbjct: 148 LELGLQTANDETLRRINRGHDFACYCDTVSRARARGLKVCTHLILGLPNETHGDYMATLA 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L   VD L L+ L I +G+   K  + G L L S              T    +    
Sbjct: 208 AVLQQGVDGLKLHPLHIVEGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPQEVIFH-R 266

Query: 253 ISNHSFLGA 261
           ++ ++    
Sbjct: 267 VTAYAKKPM 275


>gi|170586260|ref|XP_001897897.1| RE35395p [Brugia malayi]
 gi|158594292|gb|EDP32876.1| RE35395p, putative [Brugia malayi]
          Length = 533

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 118/359 (32%), Gaps = 57/359 (15%)

Query: 29  VKKCPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----- 73
              C YC      DF     S+              +   +Q   ++T    +       
Sbjct: 93  RNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRSRVTQLMQLGHNVDKV 152

Query: 74  -IFFGGGTPSLIEPQN----IALILDGIAKNWT--VSSNVE-----------ITIEANPS 115
                GGT   +        I  + D +  + +  VS  VE           ITIE  P 
Sbjct: 153 EFIVMGGTFMSLPDDYRDYFIRNLHDALTGHTSSSVSEAVEFSERSRVKCIGITIETRPD 212

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL 175
                +       G  R+ +GVQS+ E   R   R H          +A+N   ++   +
Sbjct: 213 YCLPKHLDEMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCECFEIAKNAGYKVVIHM 272

Query: 176 IYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           +  LP   + +      EL     +  D L LY   + +GT  Y++ + G        + 
Sbjct: 273 MPNLPNVGIERDMEQFIELFENPEFRPDGLKLYPTLVIRGTGLYELWRTGRYKSYPPEIL 332

Query: 233 VDLYNLTQSITSAH--GLHAYEISNHSFL---------GAESLHNLNYWRYGDYIGIGPG 281
           V   +LT  I +        Y +     +         G    H L   +    +G    
Sbjct: 333 V---DLTARILALIPPWTRVYRVQRDIPMPLVTSGVQYGNLREHALARMKQ---LGTACR 386

Query: 282 AHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
                +VG   +   I  +    ++++R++  A    E FLS E    + L+  LRLR+
Sbjct: 387 DVRTREVGIQEIHNKIVPYQ---IELIRRDYVANGGWETFLSYEDPEQDILVGLLRLRK 442


>gi|15669680|ref|NP_248493.1| hypothetical protein MJ_1487 [Methanocaldococcus jannaschii DSM
           2661]
 gi|38258708|sp|Q58882|Y1487_METJA RecName: Full=Uncharacterized methyltransferase MJ1487
 gi|1592124|gb|AAB99497.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 426

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 18/203 (8%)

Query: 28  CVKKCPYCD----FNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--T 80
           C  KC +C     F   +R   V     +++     +   R L   R I+   FG G   
Sbjct: 183 CPYKCYFCQTPRIFGKKIRHRDVENIYKYVE-----IMAERNLKDIRFITPNAFGYGSKD 237

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAGVNR-ISLG 136
              +    I  +L+ I +    +  +       E  P  V +       +   N+ + +G
Sbjct: 238 GKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIG 297

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            QS  E+ L    R H   +   A+ +AR     +  D I+ LP +T    E  ++    
Sbjct: 298 AQSGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKD 357

Query: 197 YAVDHLSLYQLTIE--KGTLFYK 217
                  ++  T      T F K
Sbjct: 358 LIKMGAKIHAHTFMPLPQTPFAK 380


>gi|218708511|ref|YP_002416132.1| putative Fe-S oxidoreductase [Vibrio splendidus LGP32]
 gi|218321530|emb|CAV17482.1| putative Fe-S oxidoreductase [Vibrio splendidus LGP32]
          Length = 317

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 91/243 (37%), Gaps = 19/243 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  +QS   ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEQTQVQSIADQLTDRAGEIARAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  + +   K    +  V + +   P  V         +    G      L
Sbjct: 88  TSTYAEVQVLKNMYEEALKAPG-AEIVGLCVGTRPDCVPDAVLDLLAEYVKQGYEIWLEL 146

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +        AR +  ++   LI  LPK+T       L++ L
Sbjct: 147 GLQTANDKTLKRINRGHDFTVYETITQRARALGIKVCTHLIVGLPKETKADNLETLEKVL 206

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  K G L  PS    +D+ +     T A  ++   +S+
Sbjct: 207 AAGTDGIKLHGLHIVEGSTMAKAWKAGKLEAPSLEEYIDIASEIIQRTPADVVYH-RVSS 265

Query: 256 HSF 258
            + 
Sbjct: 266 AAR 268


>gi|167631057|ref|YP_001681556.1| radical sam family protein [Heliobacterium modesticaldum Ice1]
 gi|167593797|gb|ABZ85545.1| radical sam family protein [Heliobacterium modesticaldum Ice1]
          Length = 323

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C                I+    +++   +    +     +F   + +  +P+ +  
Sbjct: 55  CVFC-CPQGSGACAGDPSEAIRDQFRQVRERLRSKWSQGKYIAYFQAFSNTYGDPRLLRR 113

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +       V   V +++   P  +  +      +        + LG+QS+ + +LR +
Sbjct: 114 LYEEALAQEGV---VGLSLSTRPDCLPDDVLDLLVELNGRTYLWVELGLQSIHDDTLRRI 170

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+A+   AA+   R    R+   +IY LP +         +   +  V  +  + L 
Sbjct: 171 NRGHDAATFYAALEKLRARGIRVCVHIIYGLPGEGEEAMLETGRAVAAMDVQGVKFHSLH 230

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   + H  G + L   +  + L   T  I     +  
Sbjct: 231 VMKGTRLAEWHAAGQVPLLDRDSYIRLVVDTLEILPPEMVIQ 272


>gi|189423119|ref|YP_001950296.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189419378|gb|ACD93776.1| conserved hypothetical radical SAM protein [Geobacter lovleyi SZ]
          Length = 318

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 8/193 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S   R  + +    +   T M +  +         ++F   T +     ++A 
Sbjct: 53  CIYCNNVSFSPRDTLAEIPLEEQVTTGMAYHHRRLESDKFI-VYFQKYTNTYASVGHLAE 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRISLGVQSLEEQSLRFL 148
           +     +   +   + I++   P  +     +      +     + LG+QS ++  L  +
Sbjct: 112 L---YQRALALPDVIGISVGTRPDCLTDEALELLTTLARDHYVCLELGLQSADDAILEQI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY-AVDHLSLYQL 207
            R H+  + I A+  A      +   LIY  P +   ++        S  ++  + L+QL
Sbjct: 169 NRGHSLDDFITAVKRASGRGLDICAHLIYGFPGEQPEEFVKSADLLDSLSSITSVKLHQL 228

Query: 208 TIEKGTLFYKMHK 220
              +GT    M++
Sbjct: 229 HAVEGTELAAMYR 241


>gi|126173417|ref|YP_001049566.1| putative radical SAM protein [Shewanella baltica OS155]
 gi|304409341|ref|ZP_07390961.1| conserved hypothetical protein [Shewanella baltica OS183]
 gi|307303699|ref|ZP_07583452.1| conserved hypothetical protein [Shewanella baltica BA175]
 gi|125996622|gb|ABN60697.1| conserved hypothetical radical SAM protein [Shewanella baltica
           OS155]
 gi|304351859|gb|EFM16257.1| conserved hypothetical protein [Shewanella baltica OS183]
 gi|306912597|gb|EFN43020.1| conserved hypothetical protein [Shewanella baltica BA175]
          Length = 309

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 92/250 (36%), Gaps = 23/250 (9%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F SH     +     ++   +  +  +         + +F
Sbjct: 33  CPNRDGTMGRGGCTFCNVASF-SHQTADVLSITEQLEQGKSRYREAKPQAQADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--- 133
              T +        +++    +       V + +   P  V  N          N +   
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLASYQANGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+ ++++LR + R H+ +     +  AR+   ++   LI  LP +T + +   L 
Sbjct: 148 LELGLQTAKDETLRKINRGHDFACYCDTVSRARSRGLKVCTHLILGLPDETHSDYMATLA 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHAY 251
             L   VD L L+ L + +G+   K  + G L L S E+ A  +  + +   +    H  
Sbjct: 208 AVLQQGVDGLKLHPLHVVEGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPAEVIFHR- 266

Query: 252 EISNHSFLGA 261
            ++ ++    
Sbjct: 267 -VTAYAKKPM 275


>gi|86129488|ref|NP_001034382.1| elongator complex protein 3 [Gallus gallus]
 gi|75571184|sp|Q5ZHS1|ELP3_CHICK RecName: Full=Elongator complex protein 3
 gi|53136786|emb|CAG32722.1| hypothetical protein RCJMB04_33o1 [Gallus gallus]
          Length = 546

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 122/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+     + ++Q
Sbjct: 98  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQ 156

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +              +++  V 
Sbjct: 157 LGHSVDKVEFIVMGGTFMALPEDYRDYFIRNLHDALSGHTSNNVAEAVKYSERSLTKCVG 216

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++ 
Sbjct: 217 ITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDA 276

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + LY   + +GT  Y++ K G  
Sbjct: 277 GFKVVAHMMPDLPNMGLERDTDQFVEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRY 336

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 337 KSYPPSTLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 393

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 394 -----GTQCRDVRTREVGIQEIHHKVRPYQIELIRRDYVANGGWETFLSYEDPEQDILVG 448

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 449 LLRLRK 454


>gi|148262207|ref|YP_001228913.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146395707|gb|ABQ24340.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 625

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C F         G     +  L  +    +L     ++ +     T +    Q
Sbjct: 192 CDFACDFC-F------DHKGGAGVRRFSLERIAEELKLFARSRVTQVVVLDSTFN----Q 240

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           ++    + +     ++ ++    E     ++    + + +   + + +G+QS +    R 
Sbjct: 241 DMKRAKEILRLIKRIAPHIHFHFEVRSEFIDQELARLFAQITCS-LQIGLQSADPLIQRK 299

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +GR  N ++ +  + L  +      FDLIY LP  T+  +   L  AL    +HL ++ L
Sbjct: 300 VGRIFNPADFLDKVALLNDAGAVFGFDLIYGLPGDTLKGFAASLDFALQLYPNHLDIFPL 359

Query: 208 TIEKGTLFYKM 218
            +  GT  +  
Sbjct: 360 AVLPGTRLFCR 370


>gi|45644870|gb|AAS73155.1| coproporphyrinogen III oxidase [Pasteuria penetrans]
          Length = 113

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSV----EVNNFQG 124
            +    +GGGTP+L+ P+ +  + + +   + +S  + E T+E NP ++         + 
Sbjct: 1   PLIPFCWGGGTPTLLTPKQLLRLGEALLAFFPLSGGDSEWTVEGNPETLVTAEGGERLRI 60

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY 177
            R  GVNRISLG Q+  +  L+ LGR H     + A+            DL++
Sbjct: 61  LRSLGVNRISLGAQAFTDSLLKKLGRVHGVETILRAVEGFVVRVSIFFLDLMF 113


>gi|114564114|ref|YP_751628.1| putative radical SAM protein [Shewanella frigidimarina NCIMB 400]
 gi|114335407|gb|ABI72789.1| conserved hypothetical radical SAM protein [Shewanella
           frigidimarina NCIMB 400]
          Length = 322

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 25/255 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C  +        C +C+  S        Q   +Q    +++ +       S++       
Sbjct: 33  CPNRDGTLGVGGCTFCNVASFSGEQGREQPIALQLTEGKVRALSAKKCTTSVNVNSTPTA 92

Query: 74  ---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-- 128
               +F   T +        ++     +    +  V + I   P  V         +   
Sbjct: 93  KYIAYFQAYTSTY---DEYKVLKQKYDQALEDADIVGLHIGTRPDCVPDEVLDLLVEYQQ 149

Query: 129 -GVNRI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            G+     LG+Q+    +L+ + R H   E    +  AR    ++   LI  LP +T   
Sbjct: 150 RGIEVWLELGLQTANNHTLKRINRGHQLCEYRQTVKKARAKGIKVCTHLILGLPGETSAD 209

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   LQ  L   VD L L+ L I +G++  K  +   + L S              T   
Sbjct: 210 YFNSLQTVLGIGVDGLKLHPLHIVEGSIMAKQWRYHPMPLMSLEEYASEAAKLIRHTPKE 269

Query: 247 GLHAYEISNHSFLGA 261
            +    ++ ++    
Sbjct: 270 IIFH-RVTAYAKKPM 283


>gi|28897259|ref|NP_796864.1| hypothetical protein VP0485 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260366328|ref|ZP_05778780.1| radical SAM domain protein [Vibrio parahaemolyticus K5030]
 gi|260876226|ref|ZP_05888581.1| radical SAM domain protein [Vibrio parahaemolyticus AN-5034]
 gi|260897180|ref|ZP_05905676.1| radical SAM domain protein [Vibrio parahaemolyticus Peru-466]
 gi|260902193|ref|ZP_05910588.1| radical SAM domain protein [Vibrio parahaemolyticus AQ4037]
 gi|28805468|dbj|BAC58748.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087985|gb|EFO37680.1| radical SAM domain protein [Vibrio parahaemolyticus Peru-466]
 gi|308093025|gb|EFO42720.1| radical SAM domain protein [Vibrio parahaemolyticus AN-5034]
 gi|308108482|gb|EFO46022.1| radical SAM domain protein [Vibrio parahaemolyticus AQ4037]
 gi|308114730|gb|EFO52270.1| radical SAM domain protein [Vibrio parahaemolyticus K5030]
          Length = 319

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 23/244 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIHEQLKDRAGEIHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----IS 134
           T +      + ++ +   +    +  V + +   P  V  +         VN+     + 
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDSVLDLLSDY-VNQGYEIWLE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       LQ+ 
Sbjct: 144 LGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKETRDDNIETLQKV 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   D + L+ L I +G+   K  + G L  P     V + +    +T A  +    +S
Sbjct: 204 LAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAIASEMIRMTPADVVFH-RVS 262

Query: 255 NHSF 258
           + + 
Sbjct: 263 SAAR 266


>gi|308535148|ref|YP_002136920.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|308052493|gb|ACH37124.2| LOW QUALITY PROTEIN: radical SAM domain iron-sulfur cluster-binding
           oxidoreductase [Geobacter bemidjiensis Bem]
          Length = 616

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    +  +   G   F    L  ++   +L     +  +F    T + + PQ
Sbjct: 189 CDFACAFC----YDHKGNGGVRRFA---LKRIEAELRLFARLQVPQVFVLDSTFNKV-PQ 240

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               IL  I K   ++  V    E     ++    + +     + + +G+QS +   LR 
Sbjct: 241 RAKEILRLIRK---LAPGVHFHFEVRSEFIDAEMAELFASITCS-LQIGLQSADPAVLRG 296

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +GR  +  + +    L         FDLIY LP  ++  +   L  ALS   +HL ++ L
Sbjct: 297 VGRGFDRDDFVMRASLLNRTGAIFGFDLIYGLPGDSLKLFRSSLDFALSLYPNHLDIFPL 356

Query: 208 TIEKGTLF 215
            +  GT  
Sbjct: 357 AVLPGTRL 364


>gi|269137886|ref|YP_003294586.1| putative Fe-S oxidoreductase [Edwardsiella tarda EIB202]
 gi|267983546|gb|ACY83375.1| putative Fe-S oxidoreductase [Edwardsiella tarda EIB202]
 gi|304557939|gb|ADM40603.1| Predicted Fe-S oxidoreductase [Edwardsiella tarda FL6-60]
          Length = 316

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   +++   +          +F   T +      + +
Sbjct: 60  CTFCNVASFADEQMQRR-----SIAEQLEAQARKVNRARRYLAYFQAYTSTY---AEVCI 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + D   +    +  V + +   P  V     +    YR+ G      LG+QS  +++LR 
Sbjct: 112 LRDMYREALQQADMVGLCVGTRPDCVPESVLDLLAEYREQGYEVWLELGLQSANDKTLRR 171

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP ++       LQR +   V+ + L+ L
Sbjct: 172 INRGHDFACYQRTTRAARARGLKVCSHLIVGLPGESHADCLDTLQRVVETGVEGIKLHPL 231

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G++  K  + G L   +    V         T    ++   IS  + 
Sbjct: 232 HIVTGSVLAKAWQAGRLQDLTLERYVHTAGEMIRHTPPEVIYH-RISASAR 281


>gi|253698732|ref|YP_003019921.1| radical SAM protein [Geobacter sp. M21]
 gi|251773582|gb|ACT16163.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 616

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 73/191 (38%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    +  +   G   F    L  ++    L     +  +F    T + + PQ
Sbjct: 189 CDFACAFC----YDHKGNGGVRRFA---LKRIEAELILFARLQVPQVFVLDSTFNKM-PQ 240

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               IL  I K   ++  V    E     ++    + +     + + +G+QS +   LR 
Sbjct: 241 RAKEILRLIRK---LAPGVHFHFEVRSEFIDAEMAELFASITCS-LQIGLQSADPAVLRG 296

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +GR  +  + +    L         FDLIY LP  ++  +   L  ALS   +HL ++ L
Sbjct: 297 VGRGFDRDDFVMRASLLNRTGAIFGFDLIYGLPGDSLKLFRSSLDFALSLYPNHLDIFPL 356

Query: 208 TIEKGTLFYKM 218
            +  GT  +  
Sbjct: 357 AVLPGTRLHAK 367


>gi|156973248|ref|YP_001444155.1| Fe-S oxidoreductase [Vibrio harveyi ATCC BAA-1116]
 gi|156524842|gb|ABU69928.1| hypothetical protein VIBHAR_00929 [Vibrio harveyi ATCC BAA-1116]
          Length = 314

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 87/244 (35%), Gaps = 23/244 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIQDQLKDRAGEIHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----IS 134
           T +      + ++ +   +    +  V + +   P  V            VN+     + 
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDY-VNQGYEIWLE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       L++ 
Sbjct: 144 LGLQTANNDTLKRINRGHDFECYAEITKRARALGIKVCTHLIVGLPKETRDDNVETLRKV 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L    D + L+ L I +G+   K  + G L  P     V + +    +T    ++   +S
Sbjct: 204 LEVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEYVAIASEMIRMTPKEVIYH-RVS 262

Query: 255 NHSF 258
           + + 
Sbjct: 263 SAAR 266


>gi|153838414|ref|ZP_01991081.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
 gi|149748177|gb|EDM59036.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
          Length = 317

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 23/244 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIHEQLKDRAGEIHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----IS 134
           T +      + ++ +   +    +  V + +   P  V  +         VN+     + 
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDSVLDLLSDY-VNQGYEIWLE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+    +L+ + R H+          AR +  ++   LI  LPK+T       LQ+ 
Sbjct: 144 LGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKETRDDNIETLQKV 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   D + L+ L I +G+   K  + G L  P     V + +    +T A  +    +S
Sbjct: 204 LAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAIASEMIRMTPADVVFH-RVS 262

Query: 255 NHSF 258
           + + 
Sbjct: 263 SAAR 266


>gi|18312276|ref|NP_558943.1| hypothetical protein PAE0922 [Pyrobaculum aerophilum str. IM2]
 gi|18159720|gb|AAL63125.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 471

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 48/240 (20%)

Query: 23  VHW------PF-CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           VH       PF C  +C +C            D    +R  +   + ++Q+    ++   
Sbjct: 5   VHVVALMTQPFPCPGRCTFCPSSADAPKSYMPDSPVVLRAKRNRYDPYLQTAGR-IKVYI 63

Query: 64  QLTGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVSSNVE------------ 107
           +     S       GGT S +        +A I   +      +S+ +            
Sbjct: 64  ENGHTPSKIEAVIMGGTFSALPRGYREWFVANIYKALNDFPHWTSSADPTPNLEAEQIRN 123

Query: 108 ---------ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
                    +T+E  P  +         K GV R+ LGVQS+ +  L+ + R H A+E +
Sbjct: 124 ETAELRMVALTVETRPDFINKAEVDFLLKLGVTRVELGVQSIYDDVLQKVKRGHGAAEVV 183

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
            A  + ++   ++ + ++  LP        +   E+    SY  D + +Y L +   T  
Sbjct: 184 EATAILKDSAYKVCYHVMPGLPGSDPDRDLEMVREIFSNPSYMPDCVKIYPLYVVPNTEL 243


>gi|332702715|ref|ZP_08422803.1| hypothetical protein CHP01212 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552864|gb|EGJ49908.1| hypothetical protein CHP01212 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 325

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 81/241 (33%), Gaps = 26/241 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+     R    G      S   +   +     P        G  
Sbjct: 30  CPNRDGSISRQGCAFCN----ARGSGTGLATSGLSLSEQWARLASRKTPGQAD----GAA 81

Query: 80  TPSLIEPQNIA--------LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV- 130
            PSLI               + + + +   +     I++   P  ++         AG+ 
Sbjct: 82  PPSLIAYLQSYSNTYGPAARLANLLKEISGLPGLAAISVGTRPDCLDREKLAILAGAGIP 141

Query: 131 -NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + +G+QS +  +L  +GR HN +   +A+  A     ++   ++  LP +  T++  
Sbjct: 142 ETWLDIGLQSSDNATLARIGRGHNFACFASAVEQAAAFGLKVCAHVMAGLPGEGETEFLA 201

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++   +  V  +  + L + +GT    M + G     + +  V +  L    T    + 
Sbjct: 202 TVRTVSALPVRGIKFHNLLVLQGTALETMWRTGKYSPLTPSRYVSMLCLALEETRPDMVV 261

Query: 250 A 250
            
Sbjct: 262 H 262


>gi|307205769|gb|EFN83999.1| Probable elongator complex protein 3 [Harpegnathos saltator]
          Length = 533

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/380 (18%), Positives = 127/380 (33%), Gaps = 66/380 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 85  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 143

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +              + +  + 
Sbjct: 144 LGHSVDKVEFIVMGGTFMSLPEDYRDYFIRSLHDALSGHVSSNVDEAVKFSERSRTKCIG 203

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +  LA++ 
Sbjct: 204 ITIETRPDYCLKKHLSDMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLAKDA 263

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 264 GFKVIAHMMPDLPNVDIERDIYQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 323

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              + +V +   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 324 KSYAPSVLI---DLIARILALIPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 380

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I    + + ++++R++  A    E FLS E    + L+ 
Sbjct: 381 -----GTDCRDVRTREVGIQEIHNKVQPYEVELIRRDYVANNGWETFLSYEDPMQDILIG 435

Query: 334 GLRLR---EGISVKDWEMLA 350
            LRLR   EG    + +   
Sbjct: 436 LLRLRKCSEGTFRSELKEKT 455


>gi|160874375|ref|YP_001553691.1| putative radical SAM protein [Shewanella baltica OS195]
 gi|160859897|gb|ABX48431.1| conserved hypothetical radical SAM protein [Shewanella baltica
           OS195]
 gi|315266610|gb|ADT93463.1| conserved hypothetical protein [Shewanella baltica OS678]
          Length = 309

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 90/250 (36%), Gaps = 23/250 (9%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F SH     +     ++   +  +  +         + +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASF-SHQTADMLSITEQLEQGKSRYREAKPQAQADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--- 133
              T +        +++    +       V + +   P  V  N          N +   
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLASYQANGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+ ++++LR + R H+       +  AR    ++   LI  LP +T + +   L 
Sbjct: 148 LELGLQTAKDETLRKINRGHDFGCYCDTVSRARARGLKVCTHLILGLPDETHSDYMATLA 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHAY 251
             L   VD L L+ L + +G+   K  + G L L S E+ A  +  + +   +    H  
Sbjct: 208 AVLQQGVDGLKLHPLHVVEGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPAEVIFHR- 266

Query: 252 EISNHSFLGA 261
            ++ ++    
Sbjct: 267 -VTAYAKKPM 275


>gi|328472025|gb|EGF42902.1| putative Fe-S oxidoreductase [Vibrio parahaemolyticus 10329]
          Length = 319

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 23/244 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIHEQLKDRAGEIHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----IS 134
           T +      + ++ +   +    +  V + +   P  V  +         VN+     + 
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDSVLDLLSDY-VNQGYEIWLE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+    +L+ + R H+          AR++  ++   LI  LPK+T       LQ+ 
Sbjct: 144 LGLQTANNDTLKRINRGHDFECYAEITQRARSLGIKVCTHLIVGLPKETRDDNIETLQKV 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           L+   D + L+ L I +G+   K  + G L  P     V + +    +T A  +    +S
Sbjct: 204 LAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPELEEYVAIASEMIRMTPADVVFH-RVS 262

Query: 255 NHSF 258
           + + 
Sbjct: 263 SAAR 266


>gi|317052121|ref|YP_004113237.1| hypothetical protein Selin_1954 [Desulfurispirillum indicum S5]
 gi|316947205|gb|ADU66681.1| conserved hypothetical protein [Desulfurispirillum indicum S5]
          Length = 309

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 14/218 (6%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C  +       C YC  +          ++  +     +  +R+    R     +F   +
Sbjct: 35  CPNRKSRQQGGCVYCSPSGSAAAIAAEHDSITEQVQRSIASLRRRHKARKF-LAYFQAYS 93

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLG 136
            +      + L+ D +         + ++I   P  ++           R+     +  G
Sbjct: 94  NTHAPVDELRLLYDRVLSLS--EDFIGLSIGTRPDCMDHERLDLLESYQRRGCELWVEYG 151

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQSL+E+SL F+ R H+   A+ AI   R    ++   +I+ LP +++ +    ++R   
Sbjct: 152 VQSLKEESLEFIRRGHDVDTALRAIEATRRRGIKVCAHVIFGLPTESLLESVEGVRRLGE 211

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             +D + ++ L I +GT   +M++    +LP+     D
Sbjct: 212 LGIDGIKIHMLHIMEGTELARMYRQHPFLLPTLEEYAD 249


>gi|50294426|ref|XP_449624.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528938|emb|CAG62600.1| unnamed protein product [Candida glabrata]
          Length = 557

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 125/378 (33%), Gaps = 65/378 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 166

Query: 65  LTGP-RSISSIFFGGGTPSLIE------PQNIALILDG-------------IAKNWTVSS 104
           L      +  +  GG   + +          I  + +                   +++ 
Sbjct: 167 LGHSIDKVEYVVMGG---TFMSLPKDYREDFIVKLHNALSGYNGNDIDEAIRYSQQSLTK 223

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     K G  R+ +GVQSL E   R   R H          +A
Sbjct: 224 CVGITIETRPDYCTETHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVKAVTETFAIA 283

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K 
Sbjct: 284 KDAGYKVVSHMMPDLPNVGMERDLQQFKEYFENPAFRTDGLKIYPTLVIRGTGLYELWKT 343

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGD 274
           G     + N  VDL     ++        Y +          S +   +L  L   R  D
Sbjct: 344 GRYKSYNANALVDLVARIMAMVPPWTRI-YRVQRDIPMPLVTSGVDNGNLRELALARMKD 402

Query: 275 YIGIGPGAHSRVKVGSHRVAISI-EKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
                 G  SR           +  K     ++++R++ +A    E FLS E    + L+
Sbjct: 403 L-----GVTSRDVRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYEDPKQDILI 457

Query: 333 MGLRLREGISVKDWEMLA 350
             LRLR+      +    
Sbjct: 458 GLLRLRKASKKYTYRKEF 475


>gi|68989265|ref|NP_001014344.2| elongator complex protein 3 [Danio rerio]
 gi|148887372|sp|Q5RIC0|ELP3_DANRE RecName: Full=Elongator complex protein 3
 gi|66911246|gb|AAH96810.1| Elongation protein 3 homolog (S. cerevisiae) [Danio rerio]
 gi|182890792|gb|AAI65402.1| Elp3 protein [Danio rerio]
          Length = 548

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 72/372 (19%), Positives = 122/372 (32%), Gaps = 58/372 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+     + ++QL 
Sbjct: 102 HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQLG 160

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVEIT 109
                      GGT   +  +     I  + D                   + +  V IT
Sbjct: 161 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNVTEAVRYSERSNTKCVGIT 220

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 221 IETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAKDAGF 280

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   M +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 281 KVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKS 340

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLG-------AESLHNLNYWRYGDYIG 277
            S +  V   +L   I +        Y +     +          +L  L   R  D   
Sbjct: 341 YSPSALV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDM-- 395

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
              G   R           I      + ++++R++  A    E FLS E    + L+  L
Sbjct: 396 ---GTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLL 452

Query: 336 RLREGISVKDWE 347
           RLR   S + + 
Sbjct: 453 RLRR-CSPQSFR 463


>gi|145591651|ref|YP_001153653.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145283419|gb|ABP51001.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 410

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 88/259 (33%), Gaps = 33/259 (12%)

Query: 16  SNSLGVYVHWPF---CVKKCPYCDFNSHVRRYKVGQEN-----------FIQSFLTEMQW 61
           S SLG+Y        C  +C +C        +   +             +++  ++E+++
Sbjct: 147 SESLGIYPPIEITRSCAYRCAFC----QTWGHGPVRHRPLHNIAEIVKVYVKRGISEIRF 202

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
           +     P         G TP++     +  +L  + +            E  P +V  + 
Sbjct: 203 VA----PVGFLYGSTDGKTPNI---DALTSLLRTVRELGGAPYLGSFPSETRPETVTPDV 255

Query: 122 FQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            +  R    NR IS+G+Q+  E+ L+ + R H+ +    A+  AR    +   D+I  LP
Sbjct: 256 LKAVRPYVANRRISIGLQTASEKLLKAVKRGHDVAVVEEAVKNARVFGFKPVVDVIAGLP 315

Query: 181 KQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL--- 235
            +     E  ++          ++ ++      GT  +         L  + V       
Sbjct: 316 GEDGDDVEATVREMEKLVKMGAYIRMHYYIPLPGTPLWGRRPQPPHRLYFDFVKKYKRRV 375

Query: 236 --YNLTQSITSAHGLHAYE 252
             Y   Q   S      YE
Sbjct: 376 EGYFEEQIRLSQKIYQTYE 394


>gi|319425540|gb|ADV53614.1| conserved hypothetical protein [Shewanella putrefaciens 200]
          Length = 309

 Score = 88.0 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 88/236 (37%), Gaps = 15/236 (6%)

Query: 32  CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C+   F S+     +     ++   +  +  +         + +F   T +      
Sbjct: 45  CTFCNVASF-SYQTADVLSITEQLEQGKSRYREAKPQAQADKFIA-YFQAYTSTY---DE 99

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQS 144
             +++    +       V + +   P  V  N      +    GV+    LG+Q+  +++
Sbjct: 100 YQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLARYQADGVDVWLELGLQTANDET 159

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR + R H+ +     +  AR    ++   LI  LP +T   +   L   L   VD L L
Sbjct: 160 LRRINRGHDFACYCDTVSRARARGLKVCTHLILGLPNETHCDYMATLAAVLQQGVDGLKL 219

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + L I +G+   K  + G L L S E+ A  +  + +        H   ++ ++  
Sbjct: 220 HPLHIVEGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPKEVIFHR--VTAYAKK 273


>gi|322417744|ref|YP_004196967.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124131|gb|ADW11691.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 619

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 14/190 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C       +   G   F ++    E++   +L  P+           P     
Sbjct: 189 CDFACSFC----FDHKGGGGVRRFSMERVEAELRLFARLKVPQVFVLDSTFNKIPK--RA 242

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  ++        V+  V    E     ++    + +     + + +G+QS +   LR
Sbjct: 243 KEILRLIK------KVAPRVHFHFEVRSEFIDPEMAELFASITCS-LQIGLQSADPAVLR 295

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +GR  +  + +    L         FDLIY LP  T   +   L  ALS   +HL ++ 
Sbjct: 296 AVGRGFDRDDFVNRAFLLNQSGAIFGFDLIYGLPGDTPELFRFSLDFALSLYPNHLDIFP 355

Query: 207 LTIEKGTLFY 216
           L +  GT  +
Sbjct: 356 LAVLPGTRLH 365


>gi|89902875|ref|YP_525346.1| hypothetical protein Rfer_4117 [Rhodoferax ferrireducens T118]
 gi|89347612|gb|ABD71815.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
          Length = 334

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 75/205 (36%), Gaps = 6/205 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S    Y   ++   +     ++++ +          +F   + +  E + +  
Sbjct: 64  CTFCNNASFTPGYLHRRQGITEQIDAGLEFLHRRYPGTQRYIAYFQSYSNTYGESERLRA 123

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
                  +  +S    + I   P  +     +         +  + +GV+S  + +L  +
Sbjct: 124 CYAEALAHPQISG---LAIGTRPDCLPDGVLDYLAELSGHAIIELEIGVESCNDAALARV 180

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ + ++ AI  A      ++  ++  LP ++        ++  +  +  L L+QL 
Sbjct: 181 NRGHDFAASVDAIERAAARGLEVTAHVMLGLPGESHASMLDGARQLSALPIHALKLHQLQ 240

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAV 233
           + +GT   +  +     +P  +   
Sbjct: 241 LVRGTALAREWQRNPEAVPLLDEQA 265


>gi|326791168|ref|YP_004308989.1| hypothetical protein Clole_2077 [Clostridium lentocellum DSM 5427]
 gi|326541932|gb|ADZ83791.1| Conserved hypothetical protein CHP01212 [Clostridium lentocellum
           DSM 5427]
          Length = 319

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 19/222 (8%)

Query: 23  VHWP-FCVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           +H P  C  +        C +C         +  +E+  +     ++ ++     R    
Sbjct: 24  IHLPVTCPNRDGAVAYGGCTFCGDVGAGYEMRSSKESVAEQLEKNIEKIKNKYKARYFIP 83

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-- 131
            +    + + +       +L  +        +V I++   P  +         +      
Sbjct: 84  -YLQNYSNTYMPLDTFKKVLGEL----NHPDSVGISVSTRPDCINKAYLDALHEWATTYK 138

Query: 132 ---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
               I LG+Q++   +L+ + R H+ +E + AI   +     +   +I  LP  TM    
Sbjct: 139 KEVCIELGLQTINYHTLKIINRGHSLAEYLDAIMQIKAYPFTLCTHIIVDLPWDTMEDVI 198

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              +   +   D++ L+ L I K T+    ++ G+L L    
Sbjct: 199 ETAKCMSALKSDYVKLHALYIVKNTVLGAAYEKGELELIDLE 240


>gi|224438829|ref|ZP_03659666.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313145153|ref|ZP_07807346.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313130184|gb|EFR47801.1| coproporphyrinogen III oxidase [Helicobacter cinaedi CCUG 18818]
          Length = 192

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 31/178 (17%)

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGA------------ESLHNLNYWRYGDYIG 277
               D     + +    G   YE+SN++                +  HNL YW+  +YIG
Sbjct: 16  ESKDDFCFFARELLEKAGFSQYEVSNYAKDSKLGVDSKPNGDSKQCKHNLGYWQGREYIG 75

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
            G GA  R+     R    +  + ++  K +          E LS      E +M+GLR 
Sbjct: 76  CGAGAVGRLSNRRLRAYPQLANYIKTPRKRL---------VEALSQRDLCMENIMLGLRC 126

Query: 338 REGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLR---CTQRG--MTMLDSVI 390
             G+ +   E L    +D          GF+       +R     ++G    + + + 
Sbjct: 127 AVGVKMSVLEELF---MDKVAMEKHI--GFLLSGGKCHIRQEKREEKGEEFLVANELF 179


>gi|325290801|ref|YP_004266982.1| Conserved hypothetical protein CHP01212 [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966202|gb|ADY56981.1| Conserved hypothetical protein CHP01212 [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 312

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 83/224 (37%), Gaps = 11/224 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        +   +   +     E++   +   P++    +F   T +  +P ++  
Sbjct: 50  CIFCS-TKGSGDFAGDRALTLAEQFGEVRERTKKKWPKAKYIAYFQSFTGTYADPDDLQK 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           + D   +   +   V + +   P  +         K  +NR     I LG+QS+ + +L 
Sbjct: 109 LYD---EALALKDVVGLAVSTRPDCINEEVLHVLEK--INRKTYLWIELGLQSIHDSTLA 163

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           +L R H+ +  + A H  R    R+   +I  LP +  +Q     +      +  + L+ 
Sbjct: 164 WLNRGHDYACFLEAFHKLRARGIRVCVHVILGLPCEDRSQMLATAREMSKLDIQGIKLHS 223

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + KGT    + +  +  L +    ++L      I     +  
Sbjct: 224 LHVLKGTALAGLFERKEFKLMTLEEYIELIADIVEILPPAVIIH 267


>gi|269960266|ref|ZP_06174641.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835073|gb|EEZ89157.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 314

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 84/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E  I+S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEEVQIKSIHDQLKDRAGEIHRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           + +   +    +  V + +   P  V            VN+     + LG+Q+    +L+
Sbjct: 97  LKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDY-VNQGYEIWLELGLQTANNDTLK 155

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+          AR +  ++   LI  LPK+T       +++ L    D + L+ 
Sbjct: 156 RINRGHDFECYAEITKRARALGIKVCTHLIVGLPKETRDDNIETMRKVLEVGTDGIKLHG 215

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           L I +G+   K  + G L  P     V   +    +T    ++   +S+ + 
Sbjct: 216 LHIVEGSTMAKAWRAGRLEAPELETYVATASELIRMTPKEVIYH-RVSSAAR 266


>gi|156843328|ref|XP_001644732.1| hypothetical protein Kpol_1024p28 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115381|gb|EDO16874.1| hypothetical protein Kpol_1024p28 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 559

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 128/378 (33%), Gaps = 65/378 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 110 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIEQLKQ 168

Query: 65  LTGP-RSISSIFFGGGTPSLIE------PQNIALILDG-------------IAKNWTVSS 104
           L      +  I  GG   + +          I  + +                   +++ 
Sbjct: 169 LGHSIDKVEYIVMGG---TFMSLPKDYREDFIVKLHNALSGFNGTDIDEVIQYSQQSLTK 225

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A
Sbjct: 226 CVGITIETRPDYCTPTHLDDMLKYGCTRLEIGVQSIYEDVARDTNRGHTVKAVCETFAVA 285

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K 
Sbjct: 286 KDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPEFRTDGLKIYPTLVIRGTGLYELWKT 345

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGD 274
           G     + N  VDL     ++        Y +          S +   +L  L   R  D
Sbjct: 346 GRYKSYNANALVDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVDNGNLRELALARMKD 404

Query: 275 YIGIGPGAHSR-VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
           +     G  SR ++     +     K     ++++R++ +A    E FL+ E    + L+
Sbjct: 405 F-----GTTSRDIRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLAYEDPKKDILI 459

Query: 333 MGLRLREGISVKDWEMLA 350
             LRLR+      +    
Sbjct: 460 GLLRLRKASKKYTYRKEF 477


>gi|168819601|ref|ZP_02831601.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205343489|gb|EDZ30253.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320087775|emb|CBY97539.1| Elongator complex protein 3 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 309

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  +++S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSLASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|18313337|ref|NP_560004.1| hypothetical protein PAE2426 [Pyrobaculum aerophilum str. IM2]
 gi|18160863|gb|AAL64186.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 411

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 77/241 (31%), Gaps = 15/241 (6%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C          R     E  ++ ++ + +   +   P         G TP++ 
Sbjct: 163 CGYRCAFCQTWAQGPVRYRPLEKVEEMVKVYVKKGRREIRFIAPVGFLYQSKDGKTPNI- 221

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQ 143
               +  +L  + +   +        E  P +V  +     +    N R+S G+Q+  E+
Sbjct: 222 --DALISLLKTVREAGGLPFLGTFPSETRPETVTRDVLSALKNLLANKRLSFGLQTASER 279

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--DH 201
            L+   R H+ +    A+  AR        D+I  LP +        ++     A     
Sbjct: 280 LLKLAKRGHDVATVEEAVVTARAFGFTPVVDIIAGLPGEDEEDVVATVKTMERLAAMGAR 339

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD------LYNLTQSITSAHGLHAYEISN 255
           + ++      GT  +         L +E            +     ++        +IS 
Sbjct: 340 IRMHYFIPLPGTPLWGREPSPPHKLYTEFAKRYRKKVEGYWEEQIQLSRRIIETYRQISG 399

Query: 256 H 256
           +
Sbjct: 400 Y 400


>gi|310658225|ref|YP_003935946.1| hypothetical protein CLOST_0916 [Clostridium sticklandii DSM 519]
 gi|308825003|emb|CBH21041.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 316

 Score = 87.7 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 31/276 (11%)

Query: 28  CVKK--CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           CV K  C +C   +        + +  +     + ++      +     +F   T + + 
Sbjct: 39  CVAKDGCSFCSEKAAGFEALSNKISVKEQLEKNIDYIGPRYKAKK-YIAYFQNFTNTYLP 97

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSL 140
           P     + +   K       VEI++   P S++       +           I LG+QS+
Sbjct: 98  PA----VFEAYVKEAIREDVVEISVSTRPDSLDERYLDILKMIKEAHDIEITIELGLQSI 153

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             ++L+ + R H  +E I A +L ++    +   +I  LP           +   +  VD
Sbjct: 154 NHKTLKSINRGHTLAEFIEAANLVKSYGFELVVHMILNLPYDDEEDIIEGAKILSALKVD 213

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT---------------SA 245
            + L+ L + K T    + + G L + S +  +   +L  +                   
Sbjct: 214 AVKLHSLYLIKNTPMADLVESGKLEICSMDDYIKRTSLFLAYLSPDIVIHRLLGRAPKED 273

Query: 246 HGLHAYEISNHSFLGAESLH---NLNYWR-YGDYIG 277
                Y  S          +   N  Y   Y DY+G
Sbjct: 274 TIFCNYSTSWWKLKDMIEAYMIANDLYQGCYFDYLG 309


>gi|329997593|ref|ZP_08302863.1| radical SAM protein family [Klebsiella sp. MS 92-3]
 gi|328538969|gb|EGF65021.1| radical SAM protein family [Klebsiella sp. MS 92-3]
          Length = 335

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 70  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 121

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V         +    G      LG+Q+  +++L  
Sbjct: 122 LRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLHR 181

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP ++       L++ ++  VD + L+ L
Sbjct: 182 INRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHPL 241

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 242 HIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYH-RISASAR 291


>gi|55962342|emb|CAI12039.1| novel protein similar to vertebrate elongation protein 3 homolog
           (S. cerevisiae) (ELP3) [Danio rerio]
          Length = 528

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 123/372 (33%), Gaps = 58/372 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+     + ++QL 
Sbjct: 87  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQLG 145

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVEIT 109
                      GGT   +  +     I  + D                   + +  V IT
Sbjct: 146 HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNVTEAVRYSERSNTKCVGIT 205

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 206 IETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAKDAGF 265

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   M +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 266 KVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKS 325

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V   +L   I +        Y +          S +   +L  L   R  D   
Sbjct: 326 YSPSALV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDM-- 380

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
              G   R           I      + ++++R++  A    E FLS E    + L+  L
Sbjct: 381 ---GTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLL 437

Query: 336 RLREGISVKDWE 347
           RLR   S + + 
Sbjct: 438 RLRR-CSPQSFR 448


>gi|262042776|ref|ZP_06015929.1| radical SAM protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039843|gb|EEW40961.1| radical SAM protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 335

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 70  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 121

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V         +    G      LG+Q+  +++L  
Sbjct: 122 LRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLHR 181

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP ++       L++ ++  VD + L+ L
Sbjct: 182 INRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHPL 241

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 242 HIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYH-RISASAR 291


>gi|224373544|ref|YP_002607916.1| radical SAM protein, family [Nautilia profundicola AmH]
 gi|223589646|gb|ACM93382.1| radical SAM protein, family [Nautilia profundicola AmH]
          Length = 313

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 87/258 (33%), Gaps = 34/258 (13%)

Query: 23  VHWPF--CVKK--------CPYC-------DFNS--HVRRYKVGQENFIQSFLTEMQW-- 61
           +  P   C           C +C       +F         K  +   +Q  L  +    
Sbjct: 24  ISIPGFTCPNIDGTVARGGCVFCENESFSPNFQKERVTLNLKSKENPLLQKQLKALNDQF 83

Query: 62  ------MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                 +++  G +    ++F   T +    + +  + +   K  +    + I++     
Sbjct: 84  YSTVPDLKKYYGAKKFI-VYFQSFTNTYAPFETLKALYE---KALSFPDVIGISVGTRTD 139

Query: 116 SVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           S+     +   +        +  G+QS  +++L+ + R H+ +     +   +++   + 
Sbjct: 140 SITDETLEYLAELSKKYEVWVEYGIQSSNDETLKKINRGHDFANVKEVVKKTKDLNLNVC 199

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI+ LP +T       ++  +   +D +  + L + + TL    +K G+     E   
Sbjct: 200 GHLIFGLPGETQEDMLKSVKDTIELNIDSIKFHPLYVTENTLLALEYKKGNFTPIDEQTY 259

Query: 233 VDLYNLTQSITSAHGLHA 250
           +D    +  +   +    
Sbjct: 260 IDTLIKSIKMLPQNISIQ 277


>gi|11499978|ref|NP_071224.1| hypothetical protein AF2402 [Archaeoglobus fulgidus DSM 4304]
 gi|2650692|gb|AAB91263.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 517

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 3/151 (1%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  V IT E  P      + +   + G  ++ LGVQSL +  L  + R H   E   A  
Sbjct: 191 ARCVGITFETRPDYAREEHIREMLRFGGTKVELGVQSLYDDVLERIKRGHGVKEVAEATR 250

Query: 163 LARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           L R+   ++ + ++  LP  +     +   EL    S+  D+L +Y   + +GT  Y+M 
Sbjct: 251 LLRDSAFKVGYHIMPGLPGSSFERDLRMFRELFENDSFKPDYLKIYPTLVVEGTELYEMW 310

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           K G+    +    V+L  + +          
Sbjct: 311 KRGEYEPYTTEEVVELIVMAKRRFPEWVRVQ 341


>gi|152999756|ref|YP_001365437.1| putative radical SAM protein [Shewanella baltica OS185]
 gi|151364374|gb|ABS07374.1| conserved hypothetical radical SAM protein [Shewanella baltica
           OS185]
          Length = 309

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 92/250 (36%), Gaps = 23/250 (9%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C+   F SH     +     I+   +  +  +         + +F
Sbjct: 33  CPNRDGTLGRGGCTFCNVASF-SHQTADVLSITEQIEQGKSRYREAKPQAQADKFIA-YF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--- 133
              T +        +++    +       V + +   P  V  N          N +   
Sbjct: 91  QAYTSTY---DEYQVLMAKYDEAVKDGEIVGLCVGTRPDCVPDNVLDLLASYQANGVDVW 147

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+Q+ ++++LR + R H+ +     +  AR    ++   LI  LP +T + + + L 
Sbjct: 148 LELGLQTAKDETLRKINRGHDFACYCDTVSRARARGLKVCTHLILGLPDETHSDYMVTLA 207

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS-ENVAVDLYNLTQSITSAHGLHAY 251
             L   VD L L+ L + +G+   K  + G L L S E+ A  +  + +   +    H  
Sbjct: 208 AVLQQGVDGLKLHPLHVVEGSTMAKAWRSGRLPLLSLEDYARSVGEMIRHTPAEVIFHR- 266

Query: 252 EISNHSFLGA 261
            ++ ++    
Sbjct: 267 -VTAYAKKPM 275


>gi|2623056|gb|AAC46004.1| anaerobic coproporphyrinogen III oxidase [Rhodobacter capsulatus]
          Length = 141

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           ++++ A           S+ +Y+H PFC + C +C   +   +     + + ++ + E+ 
Sbjct: 39  IEWIEAI------PAGASISLYMHVPFCRRLCWFCACRTQGTQTDAPVKTYAETLIKEVA 92

Query: 61  WMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
            ++  L     +S + +GGGT +L+   ++  I + + +   +  N E 
Sbjct: 93  MLKSHLAPGVKLSRLHWGGGTATLLPADSMRKIAEAVFEAVPLGENGEF 141


>gi|238896720|ref|YP_002921465.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044]
 gi|238549047|dbj|BAH65398.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 335

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 70  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 121

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V         +    G      LG+Q+  +++L  
Sbjct: 122 LRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLHR 181

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP ++       L++ ++  VD + L+ L
Sbjct: 182 INRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHPL 241

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 242 HIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYH-RISASAR 291


>gi|323498037|ref|ZP_08103045.1| putative Fe-S oxidoreductase [Vibrio sinaloensis DSM 21326]
 gi|323316913|gb|EGA69916.1| putative Fe-S oxidoreductase [Vibrio sinaloensis DSM 21326]
          Length = 314

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 90/243 (37%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIHDQLKDRAGEIQRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V         GY K G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLELLSGYVKQGFEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  + +L+ + R H+ +        AR +  ++   LI  LPK++ T     L + L
Sbjct: 145 GLQTANDDTLKRINRGHDFACYAQITQRARALGIKVCTHLIVGLPKESRTDNIDTLTKVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  K G L  P     V + +    +T A  ++   +S+
Sbjct: 205 EVGTDGIKLHGLHIVEGSTMAKAWKAGRLQAPELEEYVAIASEMIRLTPADVVYH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|330830105|ref|YP_004393057.1| Radical SAM protein, family [Aeromonas veronii B565]
 gi|328805241|gb|AEB50440.1| Radical SAM protein, family [Aeromonas veronii B565]
          Length = 309

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 27/273 (9%)

Query: 2   KYLSAYENNM---TGQGSNSLGVYVHWPF-CVKK--------CPYCDFNSHVRRYKVGQE 49
           + ++ +  ++    GQ  + L   +H  F C  +        C +C+  S        Q 
Sbjct: 5   ELVNTFGQDLKQRHGQKIHKLS--IHGAFTCPNRDGTLGRGGCTFCN-VSSFADESAQQL 61

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
           + +Q  L      R           +F   T +  E + +  + +       VS  V + 
Sbjct: 62  SVVQQLL----ARRDEVTRAKRYLAYFQAYTSTYAEVEYLQRMYEEALS---VSDMVGLC 114

Query: 110 IEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +   P  V                   + LG+QS  +++L+ + R H  +    A+  A 
Sbjct: 115 VGTRPDCVPDAVLDLLAGYQARGYEVWLELGLQSANDKTLQRINRGHGYAAYEDAVRRAH 174

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
               ++   LI  LP +        L R +   ++ + L+ L + +G+   K  + G L 
Sbjct: 175 QRGIKVCAHLIVGLPGEVPMDSLDTLHRIVETGIEGIKLHPLHVVEGSTLGKAWQAGRLE 234

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + +    V+        T    ++   IS  + 
Sbjct: 235 VLTLEQYVEAAVAMIQHTPPEVVYH-RISASAR 266


>gi|296242210|ref|YP_003649697.1| histone acetyltransferase, ELP3 family [Thermosphaera aggregans DSM
           11486]
 gi|296094794|gb|ADG90745.1| histone acetyltransferase, ELP3 family [Thermosphaera aggregans DSM
           11486]
          Length = 479

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 39/243 (16%)

Query: 28  CVKKCPYCD----FN---SHVRRYKVGQENFIQSFL------TEMQWMRQLTGPRSISSI 74
           C  +C YC     +N   S+       +      F         ++    +    S   +
Sbjct: 31  CPGRCYYCPGGIEYNAPKSYFGNEPAVRRARRNRFHPFYQVFERLKQYEAMGHRPSKIEV 90

Query: 75  FFGGGTPSLIEPQN----IALILDGIAKNWTVSSNVEIT-------------------IE 111
              GGT   +        IA I +   +        EI                    IE
Sbjct: 91  IVMGGTFLALPDSYKRWFIASIYEAFNRYPLRYPPWEIDLENSMLRNETAPLRVIGLTIE 150

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P   +  +       G  ++ LGVQS+ +  L+ + R H   ++I +  + R+   ++
Sbjct: 151 TRPDYGKEKHADELLSYGATKVELGVQSIHDDVLQRVNRGHGVRDSIESTRILRDAGFKI 210

Query: 172 SFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            + ++  LP        +    L     +  D L +Y   + +GT  Y+  K G      
Sbjct: 211 CYHVMLGLPGSDFDRDLEMIKTLFENPDFRPDMLKIYPTEVIEGTKLYEWWKQGLYKPYH 270

Query: 229 ENV 231
           ++ 
Sbjct: 271 DDE 273


>gi|77920081|ref|YP_357896.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77546164|gb|ABA89726.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 609

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 18/192 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIF--FGGGTPSLI 84
           C  +C +C       R       F  +    E++      G R +  +   F    P   
Sbjct: 198 CPFRCDFC----FESRGSDKVRRFPPERLRAELESFAA-AGVRQLFVLDPTFNYHQP--- 249

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + + +  ++        ++  +  TIE     ++      +       + +G+QS +   
Sbjct: 250 QAKQMLRMMAE------LAPEIHYTIEVRAEFIDEEMAGLFADINCA-LQIGLQSADPAV 302

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R  +A +    I L         FDLIY LP  T+  +   L  AL    +HL +
Sbjct: 303 LARVHRQFDAEDFTERILLLHEAGVIYGFDLIYGLPGDTLQGFIDSLDFALGLRPNHLDI 362

Query: 205 YQLTIEKGTLFY 216
           + L +  GT   
Sbjct: 363 FPLAVLPGTRLA 374


>gi|319790240|ref|YP_004151873.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1]
 gi|317114742|gb|ADU97232.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1]
          Length = 425

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 70/222 (31%), Gaps = 12/222 (5%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   F    R+     E  ++      ++  +     + ++  +G      + 
Sbjct: 185 CPYVCYYCQTPFMFGARQRHRPLEQVVEVISRMREFGLKDFRFITPNAFSYGSEDGKSVN 244

Query: 86  PQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLE 141
            + +   L    +       +       E  P  V        ++   N  + +G QS  
Sbjct: 245 LEALREFLAETKRAAGPGGRIFLGSFPSEVRPEHVTEETVSLVKEFASNDNLVIGAQSGS 304

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L+   R H   + + A+ +      + + D I+ LP +T       ++         
Sbjct: 305 DRVLKLCHRGHTVEDVVRAVKITVKAGLKANVDFIFGLPGETEEDVLETVKVMRELVKLG 364

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             ++  T      F  + +      P+  V   +  L + + 
Sbjct: 365 ARVHAHT------FMPLPQTPFAGKPAGKVHRKMEKLIRELL 400


>gi|307721773|ref|YP_003892913.1| hypothetical protein Saut_1857 [Sulfurimonas autotrophica DSM
           16294]
 gi|306979866|gb|ADN09901.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
           16294]
          Length = 319

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 80/223 (35%), Gaps = 26/223 (11%)

Query: 32  CPYCDFNSHVRRYKVGQE-------------NFIQSFLTEMQWMRQLTGPRSISS----- 73
           C +C+ +S        QE              F+   L +++        R         
Sbjct: 43  CTFCENDSFSASTDAVQELKGFHLNLSSEENPFLDKQLKQLELQFDAISKRQAKEYGAQK 102

Query: 74  --IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             ++F   T +    + +  + D   K  +  + V ++I     S+     +   K   +
Sbjct: 103 FLVYFQSFTNTYAPFETLKALYD---KALSFDNVVGLSIGTRSDSLTDETLEYLSKLSKD 159

Query: 132 R---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           +   I  G+QS+ +++L  + R H+++     I  ++     +   LI+ LP +T     
Sbjct: 160 KEIWIEFGIQSVYDETLEKINRGHDSANVKEWIIKSKEAGLNVCGHLIFGLPGETQEMML 219

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              + A  + +D +  + L + K T     +  G+    SE  
Sbjct: 220 ETSKAAYEWGIDSVKYHPLYVVKRTALANEYNHGEFTPISEQE 262


>gi|57641509|ref|YP_183987.1| histone acetyltransferase Elp3-like protein [Thermococcus
           kodakarensis KOD1]
 gi|57159833|dbj|BAD85763.1| histone acetyltransferase Elp3 homolog [Thermococcus kodakarensis
           KOD1]
          Length = 595

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 90/242 (37%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P            K G  R+ LGVQ++         R H   E I A  L R
Sbjct: 243 VGLTIETRPDWAFERQIDRMLKLGTTRVELGVQTVFNFIHERTKRGHGVEEIIKATQLLR 302

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     ++      +  D L +Y   +      Y  +K G
Sbjct: 303 DAGLKINYHIMPGLPGSNFERDLYTFRKIFEDPRFRPDMLKIYPTLVTADAPLYAWYKAG 362

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   AV+L      +            +I     +      NL    + + I  G
Sbjct: 363 KYRPYTTEEAVELLVEAYKLFPKWVRVMRIQRDIPAKLIVAGVKHSNLGQLVFNELIKRG 422

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG       ++   E  +K++R++  A   +E FLS E   ++ L+  +R
Sbjct: 423 IRPREIRFREVGHMMQKFGVQPEVEH-IKLLREDYDAAGGREIFLSFEDVKNDILIGFIR 481

Query: 337 LR 338
           LR
Sbjct: 482 LR 483


>gi|282165036|ref|YP_003357421.1| histone acetyltransferase Elp3 homolog [Methanocella paludicola
           SANAE]
 gi|282157350|dbj|BAI62438.1| histone acetyltransferase Elp3 homolog [Methanocella paludicola
           SANAE]
          Length = 531

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 3/149 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           +V +T E  P      +       GV ++ LGVQS  +  L+ + R H  +++  A    
Sbjct: 201 DVAMTFETRPDWCRTAHIDRMLDMGVTKVELGVQSTYDFILKRIERGHTVADSEEANRAL 260

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP     +     +   S   +  D+L +Y   + +GT  Y M + 
Sbjct: 261 RDSAIKVGFHMMPGLPGSGFDRDLRMFEAVFSDPRFCPDYLKIYPTLVTRGTRLYDMWER 320

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           G+    S   A  L    +          
Sbjct: 321 GEYTPYSSEEAALLLARMKERLPKWVRLQ 349


>gi|225849495|ref|YP_002729660.1| radical SAM protein, family [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644656|gb|ACN99706.1| radical SAM protein, family [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 306

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 75/231 (32%), Gaps = 20/231 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+ N     Y + ++         M++ +           +F   
Sbjct: 29  CPNRDGSKAAGGCTFCN-NQSFSPYAMTKQTVKDQIEKSMEFYKNKFKNVKGFLAYFQAF 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +    + +  + D       V   + ++I   P  V            V +    +  
Sbjct: 88  TNTYAPVEKLKEVYDQAMSYPEV---IGMSIGTRPDCVPEEVLDLIASYTVEKPEVWVEY 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+   ++LR + R H  S+ + A+    +    ++   +I  LP +         +  
Sbjct: 145 GLQTAHFRTLRNINRAHGVSDFVDAVLRTKKRSGIKICAHVILGLPGEDYEDMMETAKLI 204

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +  +D + ++ L I K T   K +  G++             L     S 
Sbjct: 205 AALPIDGIKIHPLHIVKHTAMEKQYYKGEIKELDLKEYAK---LAVDFLSH 252


>gi|156089439|ref|XP_001612126.1| histone acetyltransferase, ELP3 family protein [Babesia bovis]
 gi|154799380|gb|EDO08558.1| histone acetyltransferase, ELP3 family protein [Babesia bovis]
          Length = 1110

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 22/246 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +     +  R+ G  R+ LG+Q  + + L+ + R H+   +I AI L +
Sbjct: 639 IGLTLETRPDRINPAEIRLLREFGCTRVQLGIQHTDNKVLKHVNRGHDVEASIHAIRLLK 698

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++   L+  LP  +     +  +R L   S   D   +Y   +   T   + +K G
Sbjct: 699 ENCYKVDIHLMPDLPSSSPELDMVMFERVLSDESLQADQWKIYPCEVTPFTRIEEWYKSG 758

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYE-------ISNHSFLGAESLHNLNYWRYGDY 275
             V   +     L  L   +                 I N S +G  ++ N+        
Sbjct: 759 VHVPYYDTDPNLLIELIMRV-KRAIHPWIRLNRVIRDIPNPSIIGGTNVTNMRQLLLNKM 817

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLK---MVRKNGHAVVEKEFLSSEQQADEFLM 332
                   S   +    +     KH    L    MVR+   +  ++ FLS E   +  + 
Sbjct: 818 --------SCRGLNCRCIRCREVKHGSQALGACLMVRQYRASGGDEFFLSYESADERRIF 869

Query: 333 MGLRLR 338
             LRLR
Sbjct: 870 GFLRLR 875


>gi|152972137|ref|YP_001337283.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956986|gb|ABR79016.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 310

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V         +    G      LG+Q+  +++L  
Sbjct: 97  LRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP ++       L++ ++  VD + L+ L
Sbjct: 157 INRGHDFACYQRTARLARERGLKVCTHLIVGLPGESQGHCLQTLEQVVATGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 217 HIVKGSIMAKAWQAGRLDGIELEAYTVTAGEMIRHTPPEVIYH-RISASAR 266


>gi|91226810|ref|ZP_01261463.1| hypothetical protein V12G01_13574 [Vibrio alginolyticus 12G01]
 gi|91188941|gb|EAS75225.1| hypothetical protein V12G01_13574 [Vibrio alginolyticus 12G01]
          Length = 319

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIHEQLKDRAGEIHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V              G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADMVGLCVGTRPDCVPDAVLDLLSGYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+          AR +  ++   LI  LPK+T  +    LQ+ L
Sbjct: 145 GLQTANNDTLKRINRGHDFECYAEITKRARTLGIKVCTHLIVGLPKETRAENIETLQKVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  + G L  P     V + +    +T    ++   +S+
Sbjct: 205 AVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEYVAIASEMIRMTPPDVIYH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|110667752|ref|YP_657563.1| histone acetyltransferase-like protein [Haloquadratum walsbyi DSM
           16790]
 gi|109625499|emb|CAJ51926.1| histone acetyltransferase homolog [Haloquadratum walsbyi DSM 16790]
          Length = 569

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 104/312 (33%), Gaps = 21/312 (6%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M      + P   S   F    P   E      + D IA+
Sbjct: 172 TMTSRSHDYQEWFLKRALEAMNDYDTDSKPDPASDQSFKP-DP---EDVEFRYLEDVIAE 227

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T    N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    +
Sbjct: 228 NETADIRNIGTTFETKPDWCDPEQIDRMLDLGATKVEVGVQTTYERINREMHRGHGVQAS 287

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTL 214
           I A    R+   ++ F ++   P  T      + ++      Y  D+L +Y   + +GT 
Sbjct: 288 IDANQRLRDAGFKVGFHMMPGQPGMTSKMIREDFRQLFNRTEYRPDYLKIYPTLVVRGTR 347

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHNL--NY 269
            Y   +  D        A ++      +    +       +I            NL    
Sbjct: 348 VYDQWRRDDFEPLDNETAAEIIAEVMGMIPEYTRLQRVQRDIPADFIDAGVWKSNLRQLA 407

Query: 270 WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE--KEFLSSEQQA 327
            +  D  GI       ++    R A   E  P+     + +  + V    + FL  E   
Sbjct: 408 SQRADEKGI------EIRDIRAREAGLNETDPDPEHIELNEMTYDVAGGTEHFLKFEDSY 461

Query: 328 DEFLMMGLRLRE 339
            + L+   RLR 
Sbjct: 462 ADLLIGFCRLRF 473


>gi|212224884|ref|YP_002308120.1| Hypothetical histone acetyltransferase Elp3 [Thermococcus
           onnurineus NA1]
 gi|212009841|gb|ACJ17223.1| Hypothetical histone acetyltransferase Elp3 [Thermococcus
           onnurineus NA1]
          Length = 592

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 89/242 (36%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P            K G  R+ LGVQ++         R H   E + A  L R
Sbjct: 240 VGLTIETRPDWAFERQIDRMLKLGTTRVELGVQTIFNFIHERTKRGHGVEEIVKATQLLR 299

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     +       +  D L +Y   I      Y+  K+G
Sbjct: 300 DAGLKINYHIMPGLPGSNFERDLYTFRAIFEDARFRPDMLKVYPTLITADAPLYRWWKEG 359

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                    AV+L      +            +I     +      NL    + + I  G
Sbjct: 360 KYRPYRTEEAVELLVEAYKLFPKWVRVMRIQRDIPAKLIVDGVKHSNLGQLVFNELIKRG 419

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG       +E   E  ++++R++  A   KE FLS E   ++ L+  LR
Sbjct: 420 IRPREIRFREVGHMMQKFGVEPEMEH-IELLREDYDAAGGKEIFLSFEDTKNDILIGFLR 478

Query: 337 LR 338
           LR
Sbjct: 479 LR 480


>gi|254229683|ref|ZP_04923093.1| radical SAM protein, family [Vibrio sp. Ex25]
 gi|262395234|ref|YP_003287088.1| hypothetical protein VEA_004465 [Vibrio sp. Ex25]
 gi|151937804|gb|EDN56652.1| radical SAM protein, family [Vibrio sp. Ex25]
 gi|262338828|gb|ACY52623.1| hypothetical protein VEA_004465 [Vibrio sp. Ex25]
          Length = 319

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 83/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E  I+S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEEVQIKSIHDQLKDRAGEIHRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           + +   +    +  V + +   P  V              G      LG+Q+    +L+ 
Sbjct: 97  LKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQTANNDTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+          AR +  ++   LI  LPK++       LQ+ L+   D + L+ L
Sbjct: 157 INRGHDFECYAEITKRARALGIKVCTHLIVGLPKESRDDNIETLQKVLAVGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  P     V + +    +T    ++   +S+ + 
Sbjct: 217 HIVEGSTMAKAWRAGRLEAPELEEYVAIASEMIRMTPPDVIYH-RVSSAAR 266


>gi|254173136|ref|ZP_04879809.1| elongator complex protein 3 [Thermococcus sp. AM4]
 gi|214032545|gb|EEB73374.1| elongator complex protein 3 [Thermococcus sp. AM4]
          Length = 590

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 89/242 (36%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++         R H   E + A  L R
Sbjct: 238 VGLTIETRPDWAFERQIDRMLHFGTTRVELGVQTVFNFIHERTKRGHGVEEIVKATQLLR 297

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     +       +  D L +Y   + K    Y+  K+G
Sbjct: 298 DAGLKINYHIMPGLPGSNFERDLYTFRTIFEDSRFRPDMLKVYPTLVTKDAPLYRWWKEG 357

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                    AVDL      +            +I     +      NL    + + I  G
Sbjct: 358 KYRPYRTEEAVDLLVEAYKLFPKWVRVMRIQRDIPVQLIVDGVKHSNLGQLVFNELIKRG 417

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG       I+   E  +K++R++  A   +E FLS E   ++ L+  LR
Sbjct: 418 IRPREIRFREVGHMMEKFGIQPEVEH-IKLLREDYEASGGREIFLSFEDTKNDILIGFLR 476

Query: 337 LR 338
           LR
Sbjct: 477 LR 478


>gi|189426217|ref|YP_001953394.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422476|gb|ACD96874.1| conserved hypothetical radical SAM protein [Geobacter lovleyi SZ]
          Length = 311

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 86/224 (38%), Gaps = 11/224 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  +       V  E  +   L + +              +F   + +     ++ L
Sbjct: 44  CTFCG-DRGAAAVGVPTELPLHLQLQKSKEYLVKKFRAEKFLAYFQAYSNTYAAADDLRL 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           + +    +  +   V + I   P  +  +      +   NR     + LG+Q++ +Q+L+
Sbjct: 103 LYEAALADADM---VGLIIGTRPDCLPDSVLDMLAEL--NRRTYLWLELGMQTMHDQTLQ 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+ +  + A++  +    R+   LI  LP ++  Q    ++      VD + L+ 
Sbjct: 158 AINRGHDHACFVEAVNRCKQKKLRICAHLILGLPGESREQMLASVEELNRLGVDGVKLHH 217

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + KG+   + ++ GDL L + +  V L      +     +  
Sbjct: 218 LHVLKGSQLEQEYRTGDLPLMTRDEYVALVVDALELLDPKIMIH 261


>gi|14591614|ref|NP_143696.1| hypothetical protein PH1867 [Pyrococcus horikoshii OT3]
 gi|3258306|dbj|BAA30989.1| 617aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 617

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 88/242 (36%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++         R H   E I A  L +
Sbjct: 265 VGLTIETRPDWAFERQIDRMLSFGTTRVELGVQTIFNFIHERTKRGHGVEEIIKATQLLK 324

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     +       +  D L +Y   + +    Y  +K G
Sbjct: 325 DAGLKVNYHIMPGLPGSNFDRDLYTFRTIFEDPRFRPDMLKIYPTLVTRDAPLYAWYKAG 384

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   A++L      I            +I  H  +      NL    + + +  G
Sbjct: 385 LYRPYTTEEALELLVEAYKIFPKWVRVMRIQRDIPAHLIVAGVKHSNLGQLVFNELVRRG 444

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG            E  +K++R++  A   +E FLS E   ++ L+  LR
Sbjct: 445 IRPREIRFREVGHQMQKFGKIPEVEH-IKLLREDYEASEGQEIFLSFEDVKNDILIGFLR 503

Query: 337 LR 338
           LR
Sbjct: 504 LR 505


>gi|159905562|ref|YP_001549224.1| radical SAM family protein [Methanococcus maripaludis C6]
 gi|159887055|gb|ABX01992.1| conserved hypothetical radical SAM protein [Methanococcus
           maripaludis C6]
          Length = 332

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 11/225 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQNI 89
           C +C      R   V   N   S   +++        + I    ++F  GT +   P+ +
Sbjct: 68  CIFC--PKMGRPISVEYCNVKYSLKEQIEAQINQNKEKGIGKFYVYFYPGTNTHGTPKRL 125

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQSL 145
             + D           + I+I   P  +E           ++     I LG+Q++ +++L
Sbjct: 126 KELWDFALS---FEDVIGISIGTRPDCLENEKLDILENYVKQGYEIWIDLGIQTMHDKTL 182

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            FL R H++++   A+   +     +   +I  LP ++        +      +D L +Y
Sbjct: 183 DFLNRKHSSNDIRRALIECKKRGILVCGHIILGLPDESWNMMMETSKILSDLEIDALKIY 242

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T   K++  G+     E   + L +      S + +  
Sbjct: 243 PLVVIENTELEKIYWKGEYKSLDEKQYIHLVSDFLEHLSPYVIIQ 287


>gi|268323296|emb|CBH36884.1| putative histone acetyltransferase ELP3 [uncultured archaeon]
          Length = 518

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 73/353 (20%), Positives = 115/353 (32%), Gaps = 51/353 (14%)

Query: 28  CVK-KCPYC------DF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---- 73
           C   KC  C      DF    S+V R       F   F    Q   +L     I      
Sbjct: 87  CPHGKCVMCPGGPFSDFESPQSYVGREPAAIRAFQHGFDPYEQVKARLYQLEEIGHDFDK 146

Query: 74  --IFFGGGTPSLIEPQN----IALILDGIAKNWTVSS----NVEITIEANPSSVEVNNFQ 123
             +   GGT +    +     +   L+ + +  +       N  +T E  P   +V    
Sbjct: 147 VELILMGGTLTARPLEYQRWFVGRCLEAMTEYGSERGREVRNTGMTFETRPDYAKVGEID 206

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
                G  ++ LGVQ +  + L  + R H+  ++IAA    R+   ++ F L+  LP  +
Sbjct: 207 RMLAMGATKVELGVQQVNNKILEHIDRGHSVEDSIAANSSVRDSALKVGFHLMPGLPGSS 266

Query: 184 MTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               +    R     ++  D+L +Y   + KGT  Y   K GD V   E+ A+++    +
Sbjct: 267 PEADKEMFDRIFYDSNFKPDYLKIYPTLVVKGTQLYDQWKKGDYVPLCEDEAIEIIAYAK 326

Query: 241 SITSAHGLHAY--------------EISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
            I                       + SN   L  E LH   Y        I        
Sbjct: 327 RIIPKWVRIQRIQRDIPAQFIEAGVKKSNLRQLVNERLHEQGYKCRC----IRCREAGLS 382

Query: 287 KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLRE 339
            +       S  K      +      +      FLS E    + L+  LRLR 
Sbjct: 383 YLQGRIANDSNIKFLTERYEACNGTEY------FLSYEDVEADILIALLRLRF 429


>gi|54307748|ref|YP_128768.1| putative Fe-S oxidoreductase [Photobacterium profundum SS9]
 gi|46912171|emb|CAG18966.1| putative Fe-S oxidoreductase [Photobacterium profundum SS9]
          Length = 314

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 83/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+    V  +   Q  ++     ++      T   +    +F   T +  E Q +  
Sbjct: 45  CTFCN----VASFADEQAQYLP-IRQQLAQRAVKTDRANRYLAYFQAYTNTYAEVQLLKN 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           + +   +   +   V + +   P  V     +        G      LG+Q+  +++L+ 
Sbjct: 100 MYEEALQAANI---VGLCVGTRPDCVPDAVLELLASYCEQGYEIWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR +  ++   LI  LP  T       L+R ++   D + L+ L
Sbjct: 157 INRGHDFACYEKITKRARAMGIKVCTHLIVGLPGDTKEDNLETLKRTIAVGTDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  K   L   S     ++      +T    +    +S  + 
Sbjct: 217 HIVEGSIMAKAWKADRLEALSLETYTEIAAEMIRLTPPEVVFH-RVSASAR 266


>gi|307178812|gb|EFN67393.1| Elongator complex protein 3 [Camponotus floridanus]
          Length = 640

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 118/368 (32%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSF------LTEMQWMRQL 65
           C         C YC      DF     S+              +         ++ ++QL
Sbjct: 100 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRIEQLKQL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +        I  + D ++ +              + +  + I
Sbjct: 160 GHSVDKVEFIVMGGTFMSLPDDYRDYFIRNLHDALSGHTSSNVDEAVKYSECSHTKCIGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       +  LA++  
Sbjct: 220 TIETRPDYCLKRHLSDMLRYGCTRLEIGVQSIYEDVARDTNRGHTVRAVCESFQLAKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS------YAVDHLSLYQLTIEKGTLFYKMHKDG 222
            ++   ++  LP      +E ++ + +       +  D L +Y   + +GT  Y++    
Sbjct: 280 FKVIAHMMPDLPN---VDFERDVYQFIEFFKNPAFRADGLKIYPTLVIRGTGLYEL---W 333

Query: 223 DLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYG 273
                    A  L +L   I S        Y +          S +   +L  L   R  
Sbjct: 334 KTGRYKSYAASVLIDLIARILSLIPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMK 393

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFL 331
           D      G   R           I    + + ++++R++  A    E FLS E    + L
Sbjct: 394 DL-----GTDCRDVRTREVGIQEIHHKVQPYEVELIRRDYVANEGWETFLSYEDTMQDIL 448

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 449 VGLLRLRK 456


>gi|194378696|dbj|BAG63513.1| unnamed protein product [Homo sapiens]
          Length = 418

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 67/341 (19%), Positives = 126/341 (36%), Gaps = 39/341 (11%)

Query: 37  FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN----IALI 92
             + +R  +   + F+Q+    ++ ++QL            GGT   +  +     I  +
Sbjct: 2   CPTSMRAIRARYDPFLQTRHR-IEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNL 60

Query: 93  LDGIAKN-------------WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            D ++ +              +++  + ITIE  P      +       G  R+ +GVQS
Sbjct: 61  HDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQS 120

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS--- 196
           + E   R   R H       + HLA++   ++   ++  LP   + +   +         
Sbjct: 121 VYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFTEFFENPA 180

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEIS 254
           +  D L LY   + +GT  Y++ K G     S +  V    L   I +        Y + 
Sbjct: 181 FRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLV---ELVARILALVPPWTRVYRVQ 237

Query: 255 NH-------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
                    S +   +L  L   R  D +GI        +VG   +   +  +    +++
Sbjct: 238 RDIPMPLVSSGVEHGNLRELALARMKD-LGIQCRDVRTREVGIQEIHHKVRPYQ---VEL 293

Query: 308 VRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWE 347
           VR++  A    E FLS E    + L+  LRLR+  S + + 
Sbjct: 294 VRRDYVANGGWETFLSYEDPDQDILIGLLRLRK-CSEETFR 333


>gi|257075665|ref|ZP_05570026.1| radical SAM superfamily protein [Ferroplasma acidarmanus fer1]
          Length = 515

 Score = 86.9 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 89/280 (31%), Gaps = 40/280 (14%)

Query: 28  CVK-KCPYC----DFNS------HVRRYKVGQENFIQSF---LTEMQWMRQLTGPRSISS 73
           C   KC +C    D NS      +      G+ N+  S+    + ++ +  +    S   
Sbjct: 80  CPHGKCIFCPGGIDSNSPQSYTGYEPSALRGRTNYYDSYNIAFSRLKQLETIGHDTSKVD 139

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVS-----------------SNVEITIEANPSS 116
           +   GGT +    +     + G                           V +TIE  P  
Sbjct: 140 LIVMGGTFTARSREYQEEFVKGCIDGMNRKISPTLDQAILENEFSQRRCVGMTIETKPDW 199

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                       G  ++ LG+Q L ++ LR   R H   E + +  LAR+   ++ + L+
Sbjct: 200 FNEREIDEALSYGTTKVELGIQVLNDRILRLNRRGHGVEEIVRSTQLARDAGLKVLYHLM 259

Query: 177 YALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +   +  +        +    +  D L +Y   + K T  YK  K+G  +       V
Sbjct: 260 PGMYGSSYKEDIKSFDMVMGDERFRPDMLKIYPTLVVKNTALYKYWKEGKYIPYDTEKVV 319

Query: 234 DLYNLTQSITSAH---GLHAYEIS-NHSFLG--AESLHNL 267
            +                   +I  N    G     LHNL
Sbjct: 320 RMVTYFMKNMPPWVRVMRMQRDIPVNFIEAGVKRSDLHNL 359


>gi|237730130|ref|ZP_04560611.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908736|gb|EEH94654.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 309

 Score = 86.9 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   +++    L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLEHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPDAVLDLLCEYKDLGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTVTAGEMIRHTPPEVIYH-RISASAR 266


>gi|270263223|ref|ZP_06191493.1| putative Fe-S oxidoreductase [Serratia odorifera 4Rx13]
 gi|270042911|gb|EFA16005.1| putative Fe-S oxidoreductase [Serratia odorifera 4Rx13]
          Length = 308

 Score = 86.9 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 79/232 (34%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        Q     S   +++              +F   T +      ++L
Sbjct: 45  CTFCNVASFADEQMQRQ-----SIAEQLRVQAGRVNRAKRYLAYFQAYTSTY---AEVSL 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + D   +    +  + I +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LADMYRQALAQADMIGICVGTRPDCVPPAALDLLAGYLEQGYEVWLELGLQTAHDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R HN S       LAR    ++   LI  LP +        L++ +   VD + L+ L
Sbjct: 157 INRGHNFSCYQHTARLARERGLKVCSHLIVGLPGENSADHLATLRQVVDSGVDGIKLHPL 216

Query: 208 TIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G+   +         L  E  A     + +        H   IS  + 
Sbjct: 217 HIVTGSTLARAWQAGRMPELALEEYAASAGEMIRHTPREIVYHR--ISASAR 266


>gi|325968319|ref|YP_004244511.1| histone acetyltransferase, ELP3 family [Vulcanisaeta moutnovskia
           768-28]
 gi|323707522|gb|ADY01009.1| histone acetyltransferase, ELP3 family [Vulcanisaeta moutnovskia
           768-28]
          Length = 508

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 82/264 (31%), Gaps = 46/264 (17%)

Query: 28  CVKKCPYC--------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C   C YC              D    +R   +  + + +  +  ++    L  P S   
Sbjct: 33  CPFNCIYCPGGKKTNTPKSYLPDSPVVLRAAPLNYDPY-KQVVARIRQYEALHHPVSKVE 91

Query: 74  IFFGGGTPSLIEPQNIALI-------------------------LDGIAKNWTVSSNVEI 108
           +   GGT + +    +                             +           V +
Sbjct: 92  LIIMGGTVTSLPESYLEWFVGNAFKAVNDYPFIGTESIDNTSIEYEHKRNEKARIRVVAL 151

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
            +E  P  V+  +     + G  R+ +GVQS+ +  L+ + R H   E I A    ++  
Sbjct: 152 ELETRPDFVKPKHIDIMLRLGFTRVEIGVQSIYDDVLKRVKRGHGVKEVIEATQYLKDSA 211

Query: 169 PRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++ + ++  LP  T     +    +    S+  D + +Y   + K T  Y   ++    
Sbjct: 212 YKVCYHIMPGLPGSTPDRDLEMVKTIFSDPSFMPDCIKVYPTFVVKDTELY---EEWLKG 268

Query: 226 LPSENVAVDLYNLTQSITSAHGLH 249
           L         + L   I ++    
Sbjct: 269 LYRSYDEETWHWLLARIMASIPRW 292


>gi|157372576|ref|YP_001480565.1| putative radical SAM protein [Serratia proteamaculans 568]
 gi|157324340|gb|ABV43437.1| conserved hypothetical radical SAM protein [Serratia proteamaculans
           568]
          Length = 312

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 83/232 (35%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   QS   ++               +F   T +      ++L
Sbjct: 45  CTFCNVASFA-----DEQMQQQSIAEQLALQAVRVNRAKRYLAYFQAYTSTY---AEVSL 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V I +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAQMYRQALAQADMVGICVGTRPDCVPPAALDLLAGYLEQGYEVWLELGLQTAHDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ S       LAR    ++   LI  LP +T       LQ+ +   VD + L+ L
Sbjct: 157 INRGHDFSCYQHTARLARERGLKVCSHLIVGLPGETAADHLSTLQQVVDSGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G+   +  + G L  L  E  A     + +        H   IS  + 
Sbjct: 217 HIVTGSTLARAWQAGRLPELALEEYACSAGEMIRHTPKEVVYHR--ISASAR 266


>gi|323491064|ref|ZP_08096256.1| putative Fe-S oxidoreductase [Vibrio brasiliensis LMG 20546]
 gi|323314728|gb|EGA67800.1| putative Fe-S oxidoreductase [Vibrio brasiliensis LMG 20546]
          Length = 315

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 84/231 (36%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E  I+S   ++               +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEEAQIKSIHDQLTDRAGEITRAKRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + +   +    +  V + +   P  V         GY + G      LG+Q+    +L+ 
Sbjct: 97  LKNMYEQALEAADIVGLCVGTRPDCVPDSVLELLAGYVEQGYEIWLELGLQTANNHTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+          AR +  ++   LI  LPK+T       +Q+ L    D + L+ L
Sbjct: 157 INRGHDFECYAEITRRARALGIKVCTHLIVGLPKETRQDNIATMQQVLEVGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  K G L  P     V + +    +T    ++   +S+ + 
Sbjct: 217 HIVEGSTMAKAWKAGKLAAPELEEYVSIASELIRMTPPEVIYH-RVSSAAR 266


>gi|298530185|ref|ZP_07017587.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509559|gb|EFI33463.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 486

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 75/238 (31%), Gaps = 17/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   + Y+     +I       + MR L     +  I F     S     
Sbjct: 217 CPYSCSYCDRSVFQKSYRFNSAEYIY------EHMRYLNQHFKVRHINFYDDQFSF---- 266

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +            N+          +  +  +  + AG   ISLG++S ++  L  
Sbjct: 267 KLKRLERLTDMLVNRPLNMSFNCAVRSEHLTESLLKRLKDAGCWMISLGIESGDQDMLHA 326

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L R  N  +    + L +    R+   L+  +P +T    E   Q   S  VD  +L + 
Sbjct: 327 LNRKVNLEKLAERVRLIKKYGIRVKGLLMIGMPGETEASVEKTRQFLFSLPVDDFNLTKF 386

Query: 208 TIEKGTLFYK-MHKDGDLVLPSENVAVDLYN-----LTQSITSAHGLHAYEISNHSFL 259
           T   G   Y+ + + GD       +    +       T           Y   +    
Sbjct: 387 TPFPGAPVYRTIREYGDFQEDWSRMDCMHFLFVPQGFTLQRLEELHRSFYR-DHFKRP 443


>gi|82523810|emb|CAI78553.1| histone acetyltransferase [uncultured Chloroflexi bacterium]
          Length = 423

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 9/160 (5%)

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           G  + +L+E Q I             S NV + IE  P  ++       R+ GV ++ +G
Sbjct: 76  GVDSTTLVEAQQINE--------AAASRNVGLVIETRPDEIKPAELAWMRRLGVTKLQMG 127

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA-L 195
           VQSL++  LR   R H+  ++  A+ L R    ++    +  L   T+     +  R   
Sbjct: 128 VQSLDDSILRLNRRGHSVVQSHQAVALLRAAGFKIVLHWMPNLLGATLESDRQDFARLWD 187

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
               D L +Y   + +    Y   + G+    +    V++
Sbjct: 188 DLCPDELKIYPTQLLENADLYAYWQRGEYHPYTTEELVEM 227


>gi|90413154|ref|ZP_01221150.1| putative Fe-S oxidoreductase [Photobacterium profundum 3TCK]
 gi|90325845|gb|EAS42297.1| putative Fe-S oxidoreductase [Photobacterium profundum 3TCK]
          Length = 314

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+    V  +   Q  +I     ++      T   +    +F   T +  E Q +  
Sbjct: 45  CTFCN----VASFADEQAQYIP-IRQQLAQRAVNTDRANRYLAYFQAYTNTYAEVQLLKN 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           + +   +   +   V + +   P  V     +        G      LG+Q+  +++L+ 
Sbjct: 100 MYEEALQAANI---VGLCVGTRPDCVPDAVLELLASYCEQGYEIWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR +  ++   LI  LP  T       L+R +    D + L+ L
Sbjct: 157 INRGHDFACYENITKRARAMGIKVCTHLIVGLPGDTKEDNLETLKRTIDVGTDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  K   L   S     ++      +T    +    +S  + 
Sbjct: 217 HIVEGSIMAKAWKADRLEALSLETYTEIAAEMIRLTPPEVVFH-RVSASAR 266


>gi|269965793|ref|ZP_06179889.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269829591|gb|EEZ83829.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 319

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E  I+S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEVQIKSIHEQLKDRAGEIHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V              G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADMVGLCVGTRPDCVPDAVLDLLSGYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+          AR +  ++   LI  LPK+T  +    LQ+ L
Sbjct: 145 GLQTANNDTLKRINRGHDFECYAEITKRARTLGIKVCTHLIVGLPKETRAENIETLQKVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  + G L  P     V + +    +T    ++   +S+
Sbjct: 205 TVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPELEEYVAIASEMIRMTPPDVIYH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|157374266|ref|YP_001472866.1| putative radical SAM protein [Shewanella sediminis HAW-EB3]
 gi|157316640|gb|ABV35738.1| conserved hypothetical radical SAM protein [Shewanella sediminis
           HAW-EB3]
          Length = 308

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 14/235 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC  N     ++ G E  IQ    ++   R+    RS   I +     S        +
Sbjct: 45  CTYC--NVASFNHEHGTELSIQ---EQLDQGRERVAGRSSKYIAYFQAYTS--TYDEYRV 97

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +       V + +   P  V  +  +        G+     LG+QS ++++L+ 
Sbjct: 98  LKTKYDEAIKDPDIVGLCVGTRPDCVSDDVIELLASYQDRGIEVWLELGLQSAKDKTLKR 157

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H  ++ I  +  AR    ++   LI  LP +    +   L   L+  VD L L+ L
Sbjct: 158 INRGHLMADYIDTVTRARARGIKVCTHLILGLPDEEHQDYLNSLNAVLAAGVDGLKLHPL 217

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
            I +G+   K  ++  +  L  E  A  +  + +        H   ++ ++    
Sbjct: 218 HIVEGSTMAKAWRNDRMKLLTVEEYAYSVGEMIRHTPKDIIFHR--VTAYAKKPM 270


>gi|238751335|ref|ZP_04612828.1| hypothetical protein yrohd0001_15200 [Yersinia rohdei ATCC 43380]
 gi|238710393|gb|EEQ02618.1| hypothetical protein yrohd0001_15200 [Yersinia rohdei ATCC 43380]
          Length = 300

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 84/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   S        Q     S   ++    +     +    +F   T +      +  
Sbjct: 45  CTFCQVASFADENMQQQ-----SIAEQLAAQAKKANRANRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAAMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP + M Q    L++ ++  VD L L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEGMEQGMETLEKVVATGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLAELTLEDYVLTAGEMIRHTPAEIVYHR--ISASAR 266


>gi|47575742|ref|NP_001001215.1| elongator complex protein 3 [Xenopus (Silurana) tropicalis]
 gi|82185664|sp|Q6NVL5|ELP3_XENTR RecName: Full=Elongator complex protein 3
 gi|45709737|gb|AAH67990.1| elongation protein 3 homolog (S. cerevisiae) [Xenopus (Silurana)
           tropicalis]
          Length = 549

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 122/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+     + ++Q
Sbjct: 101 CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVE 107
           L            GGT   +        I  + D ++ + + S               V 
Sbjct: 160 LGHSVDKVEFIVMGGTFMALSEDYRDFFIRNLHDALSGHTSNSVSEAVRYSERSNTKCVG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H+A++ 
Sbjct: 220 ITIETRPDYCLKRHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHMAKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + LY   + +GT  Y++ K G  
Sbjct: 280 GFKVVSHMMPDLPNVGLERDTEQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 RSYSPSTLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|13541329|ref|NP_111017.1| RNA polymerase II complex ELP3 subunit [Thermoplasma volcanium
           GSS1]
          Length = 515

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 37/254 (14%)

Query: 28  CVK-KCPYC----DFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C   KC +C    D NS   +              +   M+   ++    +I        
Sbjct: 81  CPHGKCIFCPGGVDNNSPQSYTGFEPAALRGRNNRYDPYMETFSRIKQLETIGHDTSKID 140

Query: 74  IFFGGGTPSLIEPQNIALILDGI------------AKNWTVSSNVE-----ITIEANPSS 116
           +   GGT +          + G              +   ++   E     +T+E  P  
Sbjct: 141 LIVMGGTFTARPVDYQNSFIKGCLDAMNGYISNDLYQAIKINETSEHRCIGLTVETKPDW 200

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                       G  ++ LGVQ++ ++ LR   R H   +   +  LAR+   ++ + ++
Sbjct: 201 FFEKEIDDALNYGTTKVELGVQNINDRILRINNRGHTVEDIARSTQLARDAGLKIVYHIM 260

Query: 177 YALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +   + +         +    +  D L +Y   + KGT  Y + K+G     +    V
Sbjct: 261 PGMYGSSPSLDRESFLLMVNDERFKPDMLKIYPTLVTKGTALYNLWKNGKYRPYTTEETV 320

Query: 234 DLYNLTQSITSAHG 247
               L         
Sbjct: 321 ---ELIVDFMKMMP 331


>gi|139439603|ref|ZP_01773016.1| Hypothetical protein COLAER_02043 [Collinsella aerofaciens ATCC
           25986]
 gi|133774944|gb|EBA38764.1| Hypothetical protein COLAER_02043 [Collinsella aerofaciens ATCC
           25986]
          Length = 209

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 10/147 (6%)

Query: 227 PSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV 286
           P E+      ++ +    A G H YE+++++  G E  HN+ YW    Y+G+G  A   +
Sbjct: 10  PDEDFQASCMDVARERLGAAGYHPYEVASYALDGHECAHNIAYWTGQGYLGLGRSAAGML 69

Query: 287 KVGSHRVA----ISIEKHPESW-LKMVRKNGHAVV-EKEFLSSEQQADEFLMMGLRLREG 340
                         +    +S+ +++V+++  A   E E+LS  + A E LM+  R+  G
Sbjct: 70  DAEDFDRLAGLFPGVSSRGDSYRVRLVQRDDDATAFEAEYLSQREAAAEDLMLSCRMTGG 129

Query: 341 ISVKDW----EMLAGRNLDIECERNLQ 363
           ++         ++    L   C+R L+
Sbjct: 130 VASDLLVRAARVIPADELTAACDRALE 156


>gi|194373669|dbj|BAG56930.1| unnamed protein product [Homo sapiens]
 gi|221045358|dbj|BAH14356.1| unnamed protein product [Homo sapiens]
          Length = 428

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 67/341 (19%), Positives = 126/341 (36%), Gaps = 39/341 (11%)

Query: 37  FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN----IALI 92
             + +R  +   + F+Q+    ++ ++QL            GGT   +  +     I  +
Sbjct: 12  CPTSMRAIRARYDPFLQTRHR-IEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNL 70

Query: 93  LDGIAKN-------------WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            D ++ +              +++  + ITIE  P      +       G  R+ +GVQS
Sbjct: 71  HDALSGHTSNNIYEAVKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQS 130

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS--- 196
           + E   R   R H       + HLA++   ++   ++  LP   + +   +         
Sbjct: 131 VYEDVARDTNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFTEFFENPA 190

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEIS 254
           +  D L LY   + +GT  Y++ K G     S +  V    L   I +        Y + 
Sbjct: 191 FRPDGLKLYPTLVIRGTGLYELWKSGRYKSYSPSDLV---ELVARILALVPPWTRVYRVQ 247

Query: 255 NH-------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKM 307
                    S +   +L  L   R  D +GI        +VG   +   +  +    +++
Sbjct: 248 RDIPMPLVSSGVEHGNLRELALARMKD-LGIQCRDVRTREVGIQEIHHKVRPYQ---VEL 303

Query: 308 VRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWE 347
           VR++  A    E FLS E    + L+  LRLR+  S + + 
Sbjct: 304 VRRDYVANGGWETFLSYEDPDQDILIGLLRLRK-CSEETFR 343


>gi|50949614|emb|CAH10573.1| hypothetical protein [Homo sapiens]
          Length = 533

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 74/371 (19%), Positives = 132/371 (35%), Gaps = 56/371 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + F+Q+    ++ ++QL 
Sbjct: 87  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IEQLKQLG 145

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEIT 109
                      GGT   +  +     I  + D ++ +              +++  + IT
Sbjct: 146 HSVDKVEFIVMGGTFMALPKEYRDYFIRNLHDALSGHTSNNIYEAVKYSERSLTKCIGIT 205

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HLA++   
Sbjct: 206 IETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLAKDSGL 265

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           +    ++  LP   + +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 266 KWWPIMMPDLPNVGLERDIEQFTEFFENPAFRPDGLKLYPTLVIRGTGLYELWKSGRYKS 325

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
            S +  V    L   I +        Y +          S +   +L  L   R  D +G
Sbjct: 326 YSPSDLV---ELVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKD-LG 381

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I        +VG   +   +  +    +++VR++  A    E FLS E    + L+  LR
Sbjct: 382 IQCRDVRTREVGIQEIHHKVRPYQ---VELVRRDYVANGGWETFLSYEDPDQDILIGLLR 438

Query: 337 LREGISVKDWE 347
           LR+  S + + 
Sbjct: 439 LRK-CSEETFR 448


>gi|332158101|ref|YP_004423380.1| hypothetical protein PNA2_0459 [Pyrococcus sp. NA2]
 gi|331033564|gb|AEC51376.1| hypothetical protein PNA2_0459 [Pyrococcus sp. NA2]
          Length = 597

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 85/242 (35%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++         R H   E + A  L +
Sbjct: 245 VGLTIETRPDWAFEKQIDRMLSFGTTRVELGVQTIFNFIHERTKRGHGVEEIVKATQLLK 304

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     +       +  D L +Y   + +    Y  +K G
Sbjct: 305 DAGLKINYHIMPGLPGSNFERDLYTFKTIFEDPRFRPDMLKIYPTLVTRDAPLYAWYKAG 364

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   AV L                   +I  H  +      NL    + + +  G
Sbjct: 365 LYRPYTTEEAVKLIVEAYKFFPKWVRVMRIQRDIPAHLIVAGVKHSNLGQLVFNELVRRG 424

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG            E  +K++R++  A    E FLS E   ++ L+  LR
Sbjct: 425 IRPREIRFREVGHQMQKFGKVPEVEH-IKLLREDYEASEGLEIFLSFEDVKNDILIGFLR 483

Query: 337 LR 338
           LR
Sbjct: 484 LR 485


>gi|146313289|ref|YP_001178363.1| putative radical SAM protein [Enterobacter sp. 638]
 gi|145320165|gb|ABP62312.1| conserved hypothetical radical SAM protein [Enterobacter sp. 638]
          Length = 328

 Score = 86.5 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S     +        S   ++    +L         +F   
Sbjct: 47  CPNRDGTIGRGGCTFCNVASFADETQQHH-----SIAEQLAHQARLVNRAKQYLAYFQAY 101

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  +         +   V + +   P  V     +    Y++ G      L
Sbjct: 102 TSTWAEVQVLRSMYQQAVSQANI---VGLCVGTRPDCVPEAVLDLLSEYKELGYEIWLEL 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L  + R H+ +       LAR    ++   LI  LP +        L++ +
Sbjct: 159 GLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQQHGLETLEKVI 218

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VD + L+ L I KG+   K  + G L     +            T    ++   IS 
Sbjct: 219 ETGVDGIKLHPLHIVKGSTMAKSWEAGRLNGIELDEYTVTAGEMIRHTPPDVIYH-RISA 277

Query: 256 HSF 258
            + 
Sbjct: 278 SAR 280


>gi|320159946|ref|YP_004173170.1| hypothetical protein ANT_05360 [Anaerolinea thermophila UNI-1]
 gi|319993799|dbj|BAJ62570.1| hypothetical protein ANT_05360 [Anaerolinea thermophila UNI-1]
          Length = 532

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 84/238 (35%), Gaps = 32/238 (13%)

Query: 28  CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           C  KC +C            D    +R  +   + + +   + ++ +     P     + 
Sbjct: 99  CPGKCIFCPTDVRMPKSYLPDEPGAMRGLQNEFDPY-RQVASRLESLAATGHPTDKIELL 157

Query: 76  FGGGTPSL----------------IEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVE 118
             GGT +                 +   + A + +   +N T    NV + IE  P  + 
Sbjct: 158 ILGGTFTAYRRDYQEWFIRRCFDALNEVDSARLEEAHRRNETAPHRNVGLVIETRPDEIT 217

Query: 119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
                  R+ GV ++ +GVQSL+++ L    R H A+EA+ A  L R    ++    +  
Sbjct: 218 PQELAWLRRLGVTKVQMGVQSLDDRILALNQRGHTAAEALQATALLRAAGFKIVLHWMPN 277

Query: 179 LPKQTMTQWEMELQ--RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L   T      +        YA D + +Y   + +    Y   + G+    +    +D
Sbjct: 278 LLGATPQSDREDFARLWTQGYAPDEIKIYPCQLLQNADLYAYWERGEYQPYTTEELID 335


>gi|14324713|dbj|BAB59640.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 531

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 37/254 (14%)

Query: 28  CVK-KCPYC----DFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C   KC +C    D NS   +              +   M+   ++    +I        
Sbjct: 97  CPHGKCIFCPGGVDNNSPQSYTGFEPAALRGRNNRYDPYMETFSRIKQLETIGHDTSKID 156

Query: 74  IFFGGGTPSLIEPQNIALILDGI------------AKNWTVSSNVE-----ITIEANPSS 116
           +   GGT +          + G              +   ++   E     +T+E  P  
Sbjct: 157 LIVMGGTFTARPVDYQNSFIKGCLDAMNGYISNDLYQAIKINETSEHRCIGLTVETKPDW 216

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                       G  ++ LGVQ++ ++ LR   R H   +   +  LAR+   ++ + ++
Sbjct: 217 FFEKEIDDALNYGTTKVELGVQNINDRILRINNRGHTVEDIARSTQLARDAGLKIVYHIM 276

Query: 177 YALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +   + +         +    +  D L +Y   + KGT  Y + K+G     +    V
Sbjct: 277 PGMYGSSPSLDRESFLLMVNDERFKPDMLKIYPTLVTKGTALYNLWKNGKYRPYTTEETV 336

Query: 234 DLYNLTQSITSAHG 247
               L         
Sbjct: 337 ---ELIVDFMKMMP 347


>gi|170765775|ref|ZP_02900586.1| radical SAM protein, TIGR01212 family [Escherichia albertii
           TW07627]
 gi|170124921|gb|EDS93852.1| radical SAM protein, TIGR01212 family [Escherichia albertii
           TW07627]
          Length = 320

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARERGLKVCAHLIVGLPGEGHAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L                  T    ++   IS  + 
Sbjct: 228 HIVKGSIMAKAWEAGRLNGIELEDYTVTAGEMIRHTPPEVIYH-RISASAR 277


>gi|159041882|ref|YP_001541134.1| ELP3 family histone acetyltransferase [Caldivirga maquilingensis
           IC-167]
 gi|157920717|gb|ABW02144.1| histone acetyltransferase, ELP3 family [Caldivirga maquilingensis
           IC-167]
          Length = 510

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 85/247 (34%), Gaps = 42/247 (17%)

Query: 28  CVKKCPYC--------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  KC YC              D    +R  +V  + ++Q   + +   R +  P S   
Sbjct: 38  CPGKCIYCPGGPQMNTPKSYLPDSPVPMRAARVNYDPYMQ-VASRITQYRAMGHPVSKVE 96

Query: 74  IFFGGGTPSLIEPQ-NIALILDGIAKNWTV-----------------------SSNVEIT 109
           +   GGT + +        IL+                               +  V +T
Sbjct: 97  VIVMGGTFTALPLNYQYWFILNIYRALNDYPVWRGSSPLGDLELEESRNEDASARVVALT 156

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P              G  R+ LGVQS+ +  L  + R H  +E + +  + ++   
Sbjct: 157 IETRPDFALEKQVNWMISFGATRVELGVQSIYDDVLSRVKRGHGVAEVVKSTRVLKDSAY 216

Query: 170 RMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++ + ++  LP     +      EL     +  D + +Y   +  GT  Y+M + G+   
Sbjct: 217 KVCYHVMPGLPGSDPDRDLAMIDELFSNPDFKPDCVKIYPTLVIPGTELYEMWRRGEYSS 276

Query: 227 PSENVAV 233
            SE+  +
Sbjct: 277 YSEDTWL 283


>gi|16082300|ref|NP_394766.1| acetyltransferase [Thermoplasma acidophilum DSM 1728]
 gi|10640654|emb|CAC12432.1| probable Histone and other Protein Acetyltransferase (yeast HPA1)
           [Thermoplasma acidophilum]
          Length = 515

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 81/257 (31%), Gaps = 34/257 (13%)

Query: 28  CVK-KCPYC----DFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C   KC +C    D NS   +             ++   M+   ++    +I        
Sbjct: 81  CPHGKCIFCPGGVDNNSPQSYTGYEPAALRGRNNAYDPYMETFNRIKQLETIGHDTSKID 140

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWT-----------------VSSNVEITIEANPSS 116
           +   GGT +  +P      + G                           + +T+E  P  
Sbjct: 141 LIIMGGTFTARDPAYQRNFVKGCLDAMNGSIGNSLEESIRINETSRHRCIGLTVETKPDW 200

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                       G  ++ LGVQ+++++ L    R H  ++   +  LAR+   ++ + ++
Sbjct: 201 FFEREIDEALAYGTTKVELGVQNIDDRILAINNRGHTVADIARSTQLARDAGLKIVYHIM 260

Query: 177 YALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +   +  +        +    +  D L +Y   + +GT  Y + K+G     +    V
Sbjct: 261 PGMYGSSFEKDLKSFDLMINDERFKPDMLKIYPTLVTQGTGLYNLWKNGKYRPYTTAETV 320

Query: 234 DLYNLTQSITSAHGLHA 250
           DL               
Sbjct: 321 DLIVEFMRRMPDWIRIQ 337


>gi|14601848|ref|NP_148389.1| hypothetical protein APE_2109 [Aeropyrum pernix K1]
 gi|5105808|dbj|BAA81120.1| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 447

 Score = 86.1 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 72/231 (31%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCD----FNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C +C     F S VR R           ++   +   +   P   +       TP 
Sbjct: 166 CSYRCMFCQVPWEFKSQVRFRSVESVAAAAADYVAAGKSEIRFVAPIGFAYGSEDLRTP- 224

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLE 141
              P  +  +L  +              E  P  V     +  R+   NR IS+G+QS  
Sbjct: 225 --NPAAVEELLSRVRAVGGKPYLGSFPSETRPEFVTPEILRVVRRLAYNRRISIGLQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV-- 199
           +  L  +GR H   EA+ A  LA         D+I+ +P ++       +      +   
Sbjct: 283 DMLLERVGRGHGVEEAVRAAGLAIEYGFTPVVDIIFGMPGESYEDVVETVNAMYRLSSMG 342

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             L L+      GT   +        L        L  L + +   H    
Sbjct: 343 ARLRLHHFLPLPGTPLARSPPK---PLHPLYRKAVLKLLGRGVLEGHWEEQ 390


>gi|161506108|ref|YP_001573220.1| hypothetical protein SARI_04295 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867455|gb|ABX24078.1| hypothetical protein SARI_04295 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 309

 Score = 86.1 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 12/197 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++ +   L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLSYQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +  ++    L R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRLARERGLKVCAHLIVGLPGEGQSECLQTLARVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDL 224
            I KG++  K  + G L
Sbjct: 217 HIVKGSIMAKAWEAGRL 233


>gi|260911604|ref|ZP_05918189.1| TIGR01212 family radical SAM protein [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634310|gb|EEX52415.1| TIGR01212 family radical SAM protein [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 301

 Score = 86.1 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 15/228 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC+  S    Y   Q+   Q      ++  +          +F   
Sbjct: 31  CPTRDGHTGFGGCTYCNNRSFNPSYCEPQQAVSQQLEAGKKFFARKYPNMK-YLAYFQAY 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLG 136
           T +      I  +     +   V   V + I   P  +        +   K     +  G
Sbjct: 90  TSTY---DTIDRLKAMYEEALMVEDVVGLVIGTRPDCMPDALLHYLEELNKHTFLIVEYG 146

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           V+S   Q+L  + R H    +   I        R    +I  LP +   +   +     S
Sbjct: 147 VESANNQTLERIKRGHTFECSRETIERTHQCGIRTGAHVIIGLPGEDAEESIRQASIISS 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             ++ L ++Q+ I +GTL  K + +    L + +  +++         
Sbjct: 207 LPINILKIHQMQIIRGTLLAKEYTEQPFHLYTVDEYLNVICEYVKRLR 254


>gi|326510203|dbj|BAJ87318.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score = 86.1 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 73/418 (17%), Positives = 135/418 (32%), Gaps = 77/418 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 121 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 179

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D                   +    + 
Sbjct: 180 LGHSADKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHSAVKCIG 239

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 240 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAKDA 299

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 300 GFKVVAHMMPDLPNVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 359

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 360 RNYPPELLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 415

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 416 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANDGWETFLSYEDTRQDILIGL 472

Query: 335 LRLRE------------GISVKDWEMLAGRNLDI--ECERNLQRQGF--IERVQFSRL 376
           LRLR+            G S+     + G  + +       LQ QG+  +   +  R+
Sbjct: 473 LRLRKCGRNVTGPELVGGCSIVRELHVYGTAVPVHGRDAEKLQHQGYGTLLMEEAERI 530


>gi|74313748|ref|YP_312167.1| hypothetical protein SSON_3359 [Shigella sonnei Ss046]
 gi|73857225|gb|AAZ89932.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323165175|gb|EFZ50965.1| radical SAM superfamily protein [Shigella sonnei 53G]
          Length = 309

 Score = 86.1 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLINRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q++ +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTVHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP + + +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGLAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|261253842|ref|ZP_05946415.1| hypothetical protein VIA_003869 [Vibrio orientalis CIP 102891]
 gi|260937233|gb|EEX93222.1| hypothetical protein VIA_003869 [Vibrio orientalis CIP 102891]
          Length = 314

 Score = 86.1 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 89/243 (36%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   +S   ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEEAQAKSIHDQLIDRAGEIDRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V     +   GY + G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSGYVEQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+   Q+L+ + R H+          AR +  ++   LI  LPK+T       +++ L
Sbjct: 145 GLQTANNQTLKRINRGHDFECYAEITKRARALGIKVCTHLIVGLPKETREDNIATMEQVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           +   D + L+ L I +G+   K  K G L  P  +  V + +    +T    ++   +S+
Sbjct: 205 AVGTDGIKLHGLHIVEGSTMAKAWKAGRLEAPELDEYVSIASEMIRMTPPEVVYH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|327310433|ref|YP_004337330.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326946912|gb|AEA12018.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
          Length = 413

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 16/235 (6%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           CV +C +C  +     RY+  +   + +++++       +   P         G TP   
Sbjct: 162 CVYRCSFCLTWRLSPVRYRGVESVADMVRAYVKRGIKDIRFVAPVGFLYGSRDGRTP--- 218

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQ 143
           +  ++  +L+ + +            E  P +V     +  R    NR IS G+Q+  E+
Sbjct: 219 DVGSLVELLEAVRRAGGRPYLGTFPSETRPETVTDEVLKALRGLLANRRISFGLQTASER 278

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME---LQRALSYAVD 200
            L+   R H+    + A   AR        D+I  LP +           +++ +     
Sbjct: 279 LLKLSKREHDVEVVLNAAETARRHGFTPIVDVIAGLPGEGEEDVRATVAAMEKLVKLG-S 337

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            + L+      GT  + +     L       A             +     E++N
Sbjct: 338 KIRLHYFIPLPGTPLWGLRPAP-LHGDYRKFAAKYAPYV----EGYWQEQIELAN 387


>gi|303236564|ref|ZP_07323146.1| radical SAM protein, TIGR01212 family [Prevotella disiens
           FB035-09AN]
 gi|302483217|gb|EFL46230.1| radical SAM protein, TIGR01212 family [Prevotella disiens
           FB035-09AN]
          Length = 294

 Score = 86.1 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 7/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD N         ++  +   L + +       P      +F   T +    + +  
Sbjct: 43  CIFCD-NKSFNPAYCSRQKSVTEQLEDGKQFFARKYPEMKYLAYFQAYTNTY---EAVDK 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           +     +   V   V I I   P  V    F    +        +  G++S  +++LR++
Sbjct: 99  LKALYEEALAVEDVVGIVIGTRPDCVSPELFDYLEELNQRTFLIVEYGIESCNDETLRYI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +    A+         +   +I  LP +  ++   +     S  +  L ++Q+ 
Sbjct: 159 NRGHDFACTRRAVEETARRGIFVGGHIIMGLPGEDASESLRQAPIVSSLPLTMLKIHQMQ 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           I KGT   K++ +    L +    +DL      +  
Sbjct: 219 IIKGTKLAKLYAERPFHLYTVEEYIDLITQYIQLLR 254


>gi|218691501|ref|YP_002399713.1| putative Fe-S oxidoreductase [Escherichia coli ED1a]
 gi|218429065|emb|CAR09872.1| putative Fe-S oxidoreductase [Escherichia coli ED1a]
          Length = 309

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LA     ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLACERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|126466453|ref|YP_001041562.1| ELP3 family histone acetyltransferase [Staphylothermus marinus F1]
 gi|126015276|gb|ABN70654.1| histone acetyltransferase, ELP3 family [Staphylothermus marinus F1]
          Length = 465

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 119/364 (32%), Gaps = 57/364 (15%)

Query: 25  WPFCVKKCPYCD----FN---SHVRRYKVGQEN-------FIQSFLTEMQWMRQLTGPRS 70
            P C   C YC     +N   S+       +         + Q +   +Q+      P  
Sbjct: 15  IP-CPFNCYYCPGGPQYNAPKSYFGNEPALRRARRNQFHPYKQVWNRLLQYEYLKQIPSK 73

Query: 71  ISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSS-------------------N 105
           +  I  GG   + +          I +I + + +    +                     
Sbjct: 74  VEVIVMGG---TFLAAPQRYKEWFITMIFEALNRYPDPNPPRKWDLELAQLRNETARHRC 130

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  R+ LGVQS+ +  L  + R H  +E I +  + +
Sbjct: 131 VGLTIETRPDYGYEKHADEMLYYGATRVELGVQSIYDDVLLKVNRGHGVAETIKSTRILK 190

Query: 166 NIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  LP        +   E+     +  D L +Y   I +GT+ Y      
Sbjct: 191 DAGFKIVYHIMLGLPGSDPDRDIEMMKEIFENPDFRPDMLKIYPTEIVEGTVLY-QWWRE 249

Query: 223 DLVLPSENVAV-----DLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI- 276
               P ++        ++Y           +   +I     +      NL  +     + 
Sbjct: 250 GWYKPYDDETAVEVISEMYRYIPKYVRIMRIRR-DIPAPEVVAGTKKSNLREYVEKRCME 308

Query: 277 -GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE-KEFLSSEQQADEFLMMG 334
            GI        +VG           P+  +++ R    A    +EFL+ E   ++ ++  
Sbjct: 309 KGIKINEIRFREVGLQAWKYGRYPDPKH-IEITRTTYEASGGVEEFLAVEDTRNDIIIGF 367

Query: 335 LRLR 338
           LR+R
Sbjct: 368 LRMR 371


>gi|284161771|ref|YP_003400394.1| radical SAM protein [Archaeoglobus profundus DSM 5631]
 gi|284011768|gb|ADB57721.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631]
          Length = 458

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 18/241 (7%)

Query: 24  HWP-----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           H+P      C   C YC   S +   +  +    ++ + E++W++   G R +    FG 
Sbjct: 189 HFPMMSSRGCPFGCRYCA--SSLFMGRRFRARSAENVVDEIEWLQDKFGARYVG---FGD 243

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
            T +L    N   +L    +      +VE +  +   +++    +  + AG N I  GV+
Sbjct: 244 DTFTL----NKKRVLKICEEIKRRGLDVEWSCSSRVDTIDGETIKKMKSAGCNCIYYGVE 299

Query: 139 SLEEQSLRFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  ++ L    R   +  +   A+   +          I   P +T       L+ ++  
Sbjct: 300 SANQKILNEYYRKRISLEQVKDAVKKTKEHGILTVCSFIIGAPMETREDMMKTLKFSIKL 359

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             D+     LT   GT  YK  K+   +L         Y   + +     L   EIS   
Sbjct: 360 NPDYAQYSILTPYPGTEIYKEAKEKGWLLTENFDE---YTCGKPVLKNFYLTPKEISRFL 416

Query: 258 F 258
            
Sbjct: 417 R 417


>gi|116747554|ref|YP_844241.1| putative radical SAM protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696618|gb|ABK15806.1| conserved hypothetical radical SAM protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 304

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 71/205 (34%), Gaps = 8/205 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC  N         +E+ I + + E + + +          +F   + +      +  
Sbjct: 44  CIYC--NERGSGTGAAEESSIGAQIREAKAILRRRYNAKRFIAYFQSFSNTYAP---LPR 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI---SLGVQSLEEQSLRFL 148
           + +  A+       V ++I   P  V        R      +     G+QS ++ +L  +
Sbjct: 99  LRELYAEALEDPEVVGLSIGTRPDCVPDEVLDHLRALSAKHLIWLEYGLQSAKDSTLERI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+      A+   R     +   +I  LP +T        +      +  + ++ L 
Sbjct: 159 NRRHSVETFSDAVRRTRTRGLSVCAHVILGLPGETSEDMLNTARFIAGRDIQAVKIHSLY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAV 233
           + +GT+ +  H+ G  V PS     
Sbjct: 219 VIRGTVLHGWHRAGKYVCPSREEYA 243


>gi|197342834|gb|ACH69339.1| putative bacterial Fe-S oxidoreductase [Brachyspira intermedia]
          Length = 323

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 30/241 (12%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  K     C +C+ NS+  +     E  I +    +  ++   G       +F  GTP 
Sbjct: 39  CAHKANDGGCRFCNLNSY--KPPYVAEEDIDN--QWINGLKNYKGRYQKFYGYFQLGTP- 93

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGV 137
            + P      L    K       V +   A    +E    +       +      + +G+
Sbjct: 94  -LSPLASKESLKYANKLVHFDECVGLMFGARNDMLEDEVLKELSDLSYSYGKEIWLEMGL 152

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK------------QT 183
           QS  +++ +F+ R H+       ++  +  +  +     +I+ LPK            ++
Sbjct: 153 QSSNDETSKFINRGHDYKSFAEMVNHIKTNYNNIIICTHIIFGLPKKFNDDDKKTIELES 212

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++   +  +D +  +QL I KG+ F  M+KD +     E+  +DL +   S T
Sbjct: 213 RDDMIKTVKDVSALKIDAVKFHQLDIVKGSYFENMYKDYNFPTLDEDFYIDLMSDAISFT 272

Query: 244 S 244
            
Sbjct: 273 R 273


>gi|301059948|ref|ZP_07200831.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
 gi|300445957|gb|EFK09839.1| radical SAM protein, TIGR01212 family [delta proteobacterium
           NaphS2]
          Length = 309

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 85/224 (37%), Gaps = 25/224 (11%)

Query: 32  CPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C +CD        F     + +V     I+     ++              +F   + + 
Sbjct: 42  CIFCDGRGSGTGAF----TKERVSISGQIEKAEKFIRKRYHAQK----FIAYFQSFSNTY 93

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVNRISLGVQSL 140
               ++  + D    +  +   V ++I   P  V+    +    YRK  +  +  G+QS 
Sbjct: 94  APAFHLKQLYDEALSHPDM---VGLSIGTRPDCVDREILEMISAYRKDYLVWMEYGLQSA 150

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +Q+L+ + R H+A+    A+H++ ++   +   +I  LP +  +      +   +  V 
Sbjct: 151 HDQTLQTINRGHSAACFERAVHMSHDLGLNVCAHVILGLPGENRSMMLDTARFIAALPVQ 210

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + ++ L + + T   + +K+G+    + +  V   +L      
Sbjct: 211 GVKIHSLYVIRKTPLAERYKNGEFRCLTRDEYV---DLVVDFLE 251


>gi|14521922|ref|NP_127399.1| hypothetical protein PAB1215 [Pyrococcus abyssi GE5]
 gi|5459142|emb|CAB50628.1| N-acetyltransferase, GNAT family [Pyrococcus abyssi GE5]
          Length = 589

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 86/242 (35%), Gaps = 10/242 (4%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P              G  R+ LGVQ++         R H   E I A  L +
Sbjct: 237 VGLTIETRPDWAFERQIDRMLSFGTTRVELGVQTIFNFIHERTKRGHGVEEIIKATQLLK 296

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++++ ++  LP     +     +       +  D L +Y   + +    Y  +K G
Sbjct: 297 DAGLKINYHIMPGLPGSNFERDLYTFKTIFEDPRFRPDMLKIYPTLVTRDAPLYAWYKAG 356

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYGDYI--G 277
                +   AV+L                   +I  H  +      NL    + + +  G
Sbjct: 357 LYRPYNTKEAVELLVEAYKFFPKWVRVMRIQRDIPAHLIVAGVKHSNLGQLVFNELLKRG 416

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           I P      +VG            +  +K++R++  A    E FLS E   ++ L+  LR
Sbjct: 417 IRPREIRFREVGHQMQKFGKVPEVDH-IKLLREDYEASEGHEIFLSFEDVKNDILIGFLR 475

Query: 337 LR 338
           LR
Sbjct: 476 LR 477


>gi|268557392|ref|XP_002636685.1| C. briggsae CBR-ELPC-3 protein [Caenorhabditis briggsae]
 gi|74845841|sp|Q60LW7|ELP3_CAEBR RecName: Full=Probable elongator complex protein 3
 gi|309371185|emb|CAP39624.3| CBR-ELPC-3 protein [Caenorhabditis briggsae AF16]
          Length = 548

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 126/376 (33%), Gaps = 59/376 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   +L     +
Sbjct: 95  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRGRLNQLMQL 154

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVEI 108
                       GGT   +        I  + D ++ + + S               + I
Sbjct: 155 GHSVDKVEFIVMGGTFMSLPEDYRDFFIRNLHDALSGHTSASVEEAVAYSERSKMKCIGI 214

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS  E   R   R H         H+A++  
Sbjct: 215 TIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTG 274

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + + +    EL  + ++  D L LY   + +GT  Y++ K G   
Sbjct: 275 YKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTGRYQ 334

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +V V   +L  +I S        Y +          S +   +L      +  + +
Sbjct: 335 SYPPSVLV---DLIATILSLVPPWTRVYRVQRDIPMPLVSSGVEHGNLREHAMAKMKE-L 390

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           G+        +VG   +   +   PE  ++++R++  A    E F+S E    + L+  L
Sbjct: 391 GLKCRDVRTREVGIQEIHNKVR--PED-VELIRRDYTANGGWETFISYEDPKQDILIGLL 447

Query: 336 RLREGISVKDWEMLAG 351
           RLR+         L G
Sbjct: 448 RLRKISDKAHRAELKG 463


>gi|225567962|ref|ZP_03776987.1| hypothetical protein CLOHYLEM_04035 [Clostridium hylemonae DSM
           15053]
 gi|225163250|gb|EEG75869.1| hypothetical protein CLOHYLEM_04035 [Clostridium hylemonae DSM
           15053]
          Length = 318

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGT 80
           C  +     C +C             +  +      ++    ++          +F   T
Sbjct: 33  CPNRIAGRGCIFCA---EPGTGFEAMDAQVPVAEQIIRTKEHISKKYKARLFIAYFQNYT 89

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNR-ISL 135
            + + P++    +   AK   +   VEI +   P  +            R+  V   + L
Sbjct: 90  NTFLPPESFRAYVTEAAKIKDI---VEIAVSTRPDCITEEYLDILQKVSREHQVEITVEL 146

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++   +L  +GR H  +  I A+ + R+    +   +I  LP    +      +   
Sbjct: 147 GLQTVNYHTLEKIGRGHTLAAFIDAVLMIRSYGFDICTHVILNLPWDDRSDCLETARVLS 206

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  V+ + ++ L + K T   + +++G + L S+   ++       +     
Sbjct: 207 ALKVNAVKIHSLYVAKNTPLCEAYENGTITLCSKEEYMERLICFLELLDPDM 258


>gi|238918556|ref|YP_002932070.1| hypothetical protein NT01EI_0606 [Edwardsiella ictaluri 93-146]
 gi|238868124|gb|ACR67835.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 301

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 83/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   +++   +          +F   T +      + +
Sbjct: 45  CTFCNVASFADEQMQRR-----SIAEQLEAQARKVNRARRYLAYFQAYTSTY---AEVCI 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + D   +    +  V + +   P  V     +    YR+ G      LG+QS  E++LR 
Sbjct: 97  LRDMYREALQQADMVGLCVGTRPDCVPESVLDLLAEYREQGYEVWLELGLQSASEKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +T       LQR +   V+ + L+ L
Sbjct: 157 INRGHDFACYQRTTRAARARGLKVCSHLIVGLPGETQADCLSTLQRVVETGVEGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G++  K  + G L   + +  V         T    ++   IS  + 
Sbjct: 217 HIVTGSVLAKAWQAGRLQGLTLDRYVHTAGEMIRHTPPEVIYH-RISASAR 266


>gi|241597469|ref|XP_002404681.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215500449|gb|EEC09943.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 553

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 83/431 (19%), Positives = 146/431 (33%), Gaps = 91/431 (21%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+    +Q +RQ
Sbjct: 99  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHR-IQQLRQ 157

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWT-------------VSSNVE 107
           L            GGT   +        +  + D ++ + +              +  V 
Sbjct: 158 LGHSVDKVEFIVMGGTFMSLPEDYRDWFVRSLHDALSGHTSGSVGEAVLYGERARTKCVG 217

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  LA++ 
Sbjct: 218 ITIETRPDYCLKRHLGDMLLYGCTRLEIGVQSVHEDVARDTNRGHTVRAVCESFRLAKDA 277

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   ++  LP      +E ++ + +         +D L +Y   + +GT  Y++ K 
Sbjct: 278 GFKVVAHMMPNLPN---VDFERDIDQFVELFENPAFRMDGLKVYPTLVIRGTGLYELWKT 334

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRY 272
           G          V   +L   I +        Y +          S +   +L  L   R 
Sbjct: 335 GRYRSYPPGFLV---DLIAKILALVPPWTRIYRVQRDIPMPLVTSGVEHGNLRELALARM 391

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQAD 328
            D    G    +R +    R     E H     + ++++R++  A    E FLS E    
Sbjct: 392 RD---FG----TRCRDVRTREVGIQEIHHRVRPNQVELIRRDYVANGGWETFLSYEDPEQ 444

Query: 329 EFLMMGLRLREGISVKDW--EMLAGRNLDIECE-------------RNLQRQGF--IERV 371
           + L+  LRLR   S + +  E+  G ++  E                  Q QGF  +   
Sbjct: 445 DILVGLLRLRR-CSEETFRPELKGGASMVRELHVYGSVVPVSVRDPTKFQHQGFGTLLME 503

Query: 372 QFSRLRCTQRG 382
           +  R+  T+ G
Sbjct: 504 EAERIALTEHG 514


>gi|62181837|ref|YP_218254.1| hypothetical protein SC3267 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197261752|ref|ZP_03161826.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|62129470|gb|AAX67173.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197240007|gb|EDY22627.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|322716326|gb|EFZ07897.1| Elongator protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 309

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDETLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +  ++    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQSECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|224823598|ref|ZP_03696707.1| conserved hypothetical radical SAM protein [Lutiella nitroferrum
           2002]
 gi|224604053|gb|EEG10227.1| conserved hypothetical radical SAM protein [Lutiella nitroferrum
           2002]
          Length = 268

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 17/226 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD          G++    S   ++   +  T        +F   T +  E   +  
Sbjct: 45  CTFCD------VKSFGRDAAALSIAEQIAREKHKTDRARRYLAYFQAYTSTYAEVTTLKA 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + D  A    V   V + +   P  V          Y++ G      LG+Q+  + +   
Sbjct: 99  LYDEAAAQSDV---VGLCVGTRPDCVPDSALELLADYQQQGYEIWLELGLQTAHDATQER 155

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H  ++   A+  A     ++   LI  LP +        L   L   V+ L L+ L
Sbjct: 156 IRRGHGLTDYRDAVQRAHRRGLKVCTHLIAGLPGEDDAHVHQTLATVLDIGVEGLKLHPL 215

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            I +G+     ++ G++      +    Y    +    H    + I
Sbjct: 216 MIVRGSRMAAQYRRGEIAP----LTQQHYAALAAELIRHTRPRWSI 257


>gi|167752286|ref|ZP_02424413.1| hypothetical protein ALIPUT_00530 [Alistipes putredinis DSM 17216]
 gi|167660527|gb|EDS04657.1| hypothetical protein ALIPUT_00530 [Alistipes putredinis DSM 17216]
          Length = 320

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  +    Y   +++  +     + +         +  ++F   + +      +  
Sbjct: 52  CTFCDNRAFTPSYCSPRKSLTRQIDEGIAFHAARGRDEGLCLVYFQPFSNTHAPVARLRE 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +      +  +S    + I   P  V+        +    R   +  GV+S  +++LR +
Sbjct: 112 LYAEALAHPRISG---LVIGTRPDCVDDEKLDLLAELARKRYVAVEYGVESTCDETLRAV 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ + A  AI  +      +    I  LP +       +++R  +  ++ +  +QL 
Sbjct: 169 RRGHDFAAARQAIAASAARGLHVGAHFILGLPGEDDEMLLRQVERINALPLETVKFHQLQ 228

Query: 209 IEKGTLFYKMH 219
           + +GT     +
Sbjct: 229 LVRGTTLAAQY 239


>gi|256086957|ref|XP_002579648.1| histone acetyltransferase-related [Schistosoma mansoni]
 gi|238665116|emb|CAZ35887.1| histone acetyltransferase-related [Schistosoma mansoni]
          Length = 563

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 66/373 (17%), Positives = 122/373 (32%), Gaps = 62/373 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSF------LTEMQWMRQL 65
           C         C YC      DF     S+              +         ++ ++QL
Sbjct: 100 CPHIAVTGNVCVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFIQTRHRIEQLQQL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +        I  + D ++ +              + +  V I
Sbjct: 160 GHTCDKVEFIVMGGTFMCLSEDYRDYFIRSLHDALSGHTSQNVDEAVSYSERSKTKCVGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + HL+++  
Sbjct: 220 TIETRPDYCLKKHLSEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLSKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ + G   
Sbjct: 280 FKVVSHMMPDLPNVGWERDLAQFAEYFENPAFRSDGLKIYPTLVIRGTGLYELWRTGRYK 339

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
                + +   +L   I +        Y I          S +   +L  L   R  +  
Sbjct: 340 SYPPGMLI---DLIARILALVPPWTRIYRIQRDIPMPLVTSGVEHGNLRELVLARMEEL- 395

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               GA  R           I    + + +++VR++  A    E FL+ E    + L+  
Sbjct: 396 ----GASCRDVRTREVGIQEIHSRVKPYQVELVRRDYVANGGWETFLAYEDPYQDILIGL 451

Query: 335 LRLREGISVKDWE 347
           LRLR+  S++ + 
Sbjct: 452 LRLRK-CSLQTFR 463


>gi|82778525|ref|YP_404874.1| hypothetical protein SDY_3392 [Shigella dysenteriae Sd197]
 gi|309785539|ref|ZP_07680170.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
 gi|81242673|gb|ABB63383.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308926659|gb|EFP72135.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
          Length = 309

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LA     ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLACQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|254577911|ref|XP_002494942.1| ZYRO0A13420p [Zygosaccharomyces rouxii]
 gi|238937831|emb|CAR26009.1| ZYRO0A13420p [Zygosaccharomyces rouxii]
          Length = 561

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 68/379 (17%), Positives = 126/379 (33%), Gaps = 67/379 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIEQLKQ 166

Query: 65  LTGPRSISSIFFGGGTPSLIE----PQNIALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        +  + +                   +++  V 
Sbjct: 167 LGHSIDKVEYIIMGGTFMSLPKDYREDFVTKLHNALSGYNGNDIDEAIQYSQQSLTKCVG 226

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 227 ITIETRPDYCTQTHLDDLLKYGCTRLEIGVQSIYEDVARDTNRGHTVRAVCETFSVAKDC 286

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 287 GYKVVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYELWKTGRY 346

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              + N  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 347 KSYNANALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARMKD- 402

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
              G    ++ +    R     E H +     ++++R++ +A    E FLS E    + L
Sbjct: 403 --FG----TKCRDVRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYEDPKKDIL 456

Query: 332 MMGLRLREGISVKDWEMLA 350
           +  LRLR+      +    
Sbjct: 457 IGLLRLRKASKRYTYRKEF 475


>gi|308811753|ref|XP_003083184.1| OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
 gi|116055063|emb|CAL57459.1| OJ000223_09.4 [Oryza sativa (ISS) [Ostreococcus tauri]
          Length = 554

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 122/364 (33%), Gaps = 59/364 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS     Q  R 
Sbjct: 105 CPHIATTGNVCVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYAQSRGRVDQLRRL 164

Query: 65  LTGPRSISSIFFGGGT---PSLIEPQNIALILDG-------------IAKNWTVSSNVEI 108
                 +  +  GG     P+      I  + D               A   + +  V +
Sbjct: 165 GHAVDKVEFVLMGGTFMSLPTDYRDYFIRNLHDSLSGASSSCVDEAVRASEQSRTKCVGL 224

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P   +  + +     G  R+ +G+QS+ E   R   R H  +       LA++  
Sbjct: 225 TIETRPDYCQSPHLRQMLSYGCTRLEIGLQSIYEDVARDTNRGHTVAAVQKCFELAKDAG 284

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +     +       +  D L LY   + +GT  Y++ + G   
Sbjct: 285 FKVIAHMMPDLPNVGMERDLESFREFFESPDFRTDGLKLYPTLVIRGTGLYELWRTGKYR 344

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
                  V   +L   I +     +  Y +          + +   +L  L   R  D +
Sbjct: 345 NYHPERLV---DLVARILALVPPWVRVYRVQRDIPMPLVTAGVEKGNLRELAMARMAD-L 400

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           G+        +VG   +   +       +++VR++  A    E FLS E    + L+  L
Sbjct: 401 GLRCRDVRTREVGLQDIHNRVAPTH---VELVRRDYVANGSWETFLSYEDPRQDILVGLL 457

Query: 336 RLRE 339
           RLR+
Sbjct: 458 RLRK 461


>gi|322615333|gb|EFY12254.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618308|gb|EFY15199.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622887|gb|EFY19731.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626791|gb|EFY23588.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631360|gb|EFY28120.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635373|gb|EFY32087.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643372|gb|EFY39936.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647056|gb|EFY43557.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651581|gb|EFY47954.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655051|gb|EFY51362.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657654|gb|EFY53922.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664150|gb|EFY60348.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667433|gb|EFY63595.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674681|gb|EFY70773.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675686|gb|EFY71759.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682322|gb|EFY78345.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684925|gb|EFY80923.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195870|gb|EFZ81041.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198987|gb|EFZ84084.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204313|gb|EFZ89322.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207660|gb|EFZ92607.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211287|gb|EFZ96131.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214771|gb|EFZ99520.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221251|gb|EGA05677.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224007|gb|EGA08300.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230343|gb|EGA14462.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233319|gb|EGA17413.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239356|gb|EGA23406.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242393|gb|EGA26419.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246903|gb|EGA30869.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254164|gb|EGA37984.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255281|gb|EGA39058.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262744|gb|EGA46300.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264054|gb|EGA47562.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269440|gb|EGA52895.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 309

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQGVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEIIYH-RISASAR 266


>gi|238910123|ref|ZP_04653960.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 309

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQSVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|224136043|ref|XP_002322225.1| histone acetyltransferase [Populus trichocarpa]
 gi|222869221|gb|EEF06352.1| histone acetyltransferase [Populus trichocarpa]
          Length = 563

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 124/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 115 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 173

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +                +  + 
Sbjct: 174 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIG 233

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 234 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 293

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 294 GFKVVAHMMPDLPNVGVERDLESFREFFESPCFRADGLKIYPTLVIRGTGLYELWKTGRY 353

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I +        Y +          S +   +L  L   R  D 
Sbjct: 354 RNYPPEQLV---DIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 409

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I+  PE  +++VR++  A    E FLS E    + L+  
Sbjct: 410 LGLKCRDVRTREAGIQDIHHKIK--PEE-VQLVRRDYTANEGWETFLSYEDTRQDILVGL 466

Query: 335 LRLRE 339
           LRLR+
Sbjct: 467 LRLRK 471


>gi|255726068|ref|XP_002547960.1| hypothetical protein CTRG_02257 [Candida tropicalis MYA-3404]
 gi|240133884|gb|EER33439.1| hypothetical protein CTRG_02257 [Candida tropicalis MYA-3404]
          Length = 547

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 123/376 (32%), Gaps = 61/376 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    +  +R 
Sbjct: 98  CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIDQLRS 156

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG--IAKNWTVSSNVE----------- 107
           L            GGT   +        I  + +         +   +E           
Sbjct: 157 LGHSIDKVEYIIMGGTFMSLPIDYREGFITQLHNALTGFNEKNIDEAIEFSQQSQTKCVG 216

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 217 ITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKSVCETFAVAKDA 276

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++ K G  
Sbjct: 277 GYKVVSHMMPDLPNVGMERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELWKQGLY 336

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIG 277
              + N  +DL     ++        Y +     +     G E  +L  L   R  D   
Sbjct: 337 KSYNANALIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD--- 392

Query: 278 IGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            G    S   V +  V I    H      ++++R++ +A    E FLS E    + L+  
Sbjct: 393 FG---TSCRDVRTREVGIQEVHHKVIPDQVELIRRDYYANGGWETFLSYEDPKQDILIGL 449

Query: 335 LRLREGISVKDWEMLA 350
           LRLR+      +    
Sbjct: 450 LRLRKASKKYTYRKEF 465


>gi|45201297|ref|NP_986867.1| AGR201Cp [Ashbya gossypii ATCC 10895]
 gi|44986151|gb|AAS54691.1| AGR201Cp [Ashbya gossypii ATCC 10895]
          Length = 600

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 126/376 (33%), Gaps = 61/376 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 150 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 208

Query: 65  LTGPRSISSIFFGGGTPSLIE----PQNIALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + +                   +++  V 
Sbjct: 209 LGHSIDKVEYIIMGGTFMSLPREYREDFIVKLHNALSGFNGSDIDEAIRYSQQSLTKCVG 268

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQSL E   R   R H          +A++ 
Sbjct: 269 ITIETRPDYCTRTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVKSVCETFAVAKDA 328

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 329 GYKIVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYELWKTGRY 388

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIG 277
              + N  VDL     ++        Y +     +     G E  +L  L   R  D+  
Sbjct: 389 KSYNANALVDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKDF-- 445

Query: 278 IGPGAHSRVKVGSHRVAISIEK--HPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
              G   R           +    HPE  ++++R++ +A    E FLS E    + L+  
Sbjct: 446 ---GTTCRDVRTREVGIQEVHHKVHPEQ-VELIRRDYYANGGWETFLSYEDPKQDILIGL 501

Query: 335 LRLREGISVKDWEMLA 350
           LRLR+      +    
Sbjct: 502 LRLRKASKKYTYRKEF 517


>gi|16762091|ref|NP_457708.1| hypothetical protein STY3508 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766624|ref|NP_462239.1| FeS oxidoreductase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143580|ref|NP_806922.1| hypothetical protein t3246 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167994522|ref|ZP_02575613.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168243165|ref|ZP_02668097.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168463445|ref|ZP_02697362.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194451906|ref|YP_002047358.1| hypothetical protein SeHA_C3627 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197250030|ref|YP_002148254.1| radical SAM protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|200388282|ref|ZP_03214894.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|213053136|ref|ZP_03346014.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213648875|ref|ZP_03378928.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213857505|ref|ZP_03384476.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25305777|pir||AH0906 conserved hypothetical protein STY3508 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421887|gb|AAL22198.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504394|emb|CAD07846.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139215|gb|AAO70782.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194410210|gb|ACF70429.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195633137|gb|EDX51551.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213733|gb|ACH51130.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|199605380|gb|EDZ03925.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205327637|gb|EDZ14401.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337918|gb|EDZ24682.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|261248494|emb|CBG26331.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995528|gb|ACY90413.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159878|emb|CBW19397.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914356|dbj|BAJ38330.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225246|gb|EFX50305.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323131689|gb|ADX19119.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332990187|gb|AEF09170.1| putative FeS oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 309

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|307297507|ref|ZP_07577313.1| conserved hypothetical protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916767|gb|EFN47149.1| conserved hypothetical protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 325

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 83/239 (34%), Gaps = 20/239 (8%)

Query: 28  CVKK------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGG 79
           C  K      C YCD  S    + V       S   +++   +    + I     +F   
Sbjct: 32  CPHKVNGKGGCIYCD--SSGSGFTVDSTL---SLREQLESRMEFLRKKGIRKFMAYFQAN 86

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLG 136
           + +    + +  +     +   V   V + I   P  V         +   +    + LG
Sbjct: 87  SNTFAPVKKLRQL----YREVIVDDVVILDISTRPDLVSDEVLDLLEEFTSDVDVILELG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+   +++ + R H  S  I +    +     +   +I  LP  T        +    
Sbjct: 143 LQSINPNTIKTINRGHTLSHFIDSALRIKKRRIDLVVHMISNLPWDTEEDVAEAARLISV 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +D + L+ L + +GT   +M++ G++ + S +  ++   +         +    +S+
Sbjct: 203 LGIDGVKLHSLYVVEGTELARMYEAGEVKIGSVDEFLERVVVFLEHLDWRVVVHRLVSD 261


>gi|219362859|ref|NP_001136699.1| hypothetical protein LOC100216833 [Zea mays]
 gi|194696686|gb|ACF82427.1| unknown [Zea mays]
          Length = 570

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 119/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 122 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 180

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D                   +    + 
Sbjct: 181 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAICYSEHSAVKCIG 240

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 241 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 300

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 301 GFKVVAHMMPDLPNVGVERDLESFREFFESPAFRADGLKIYPTLVIRGTGLYELWKTGRY 360

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 361 RNYPPELLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 416

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 417 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANEGWETFLSYEDTRQDILIGL 473

Query: 335 LRLRE 339
           LRLR+
Sbjct: 474 LRLRK 478


>gi|296104932|ref|YP_003615078.1| putative radical SAM protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059391|gb|ADF64129.1| putative radical SAM protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 327

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 84/243 (34%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +    +S   ++    +L         +F   
Sbjct: 47  CPNRDGTLGRGGCTFCNVASFA-----DEAQQHKSIAEQLAHQARLVNRAKQYLAYFQAY 101

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  +         +   V + +   P  V     +    Y++ G      L
Sbjct: 102 TSTWAEVQVLRSMYQQAVAQANI---VGLCVGTRPDCVPDAVLDLLSEYKEQGYEIWLEL 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L  + R H+ +       LAR    ++   LI  LP +        L++ +
Sbjct: 159 GLQSAHDKTLHRINRGHDFACYQRTTRLARERGLKVCTHLIVGLPGEGQQHGLETLEKVV 218

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VD + L+ L I +G++  K  + G L   + +            T    ++   IS 
Sbjct: 219 ETGVDGIKLHPLHIVQGSIMAKAWQAGRLNGIALDEYTVTAGEMIRHTPPEIVYH-RISA 277

Query: 256 HSF 258
            + 
Sbjct: 278 SAR 280


>gi|256811095|ref|YP_003128464.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
 gi|256794295|gb|ACV24964.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
          Length = 426

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 68/204 (33%), Gaps = 20/204 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGG-- 79
           C   C +C     F  +VR         I++    ++ M +  L   R I+   FG G  
Sbjct: 183 CPYSCYFCQTPRIFGKNVRHRS------IENICKYVEIMAERNLKDIRFITPNAFGYGSK 236

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAGVNR-ISL 135
               +    I  +L+ I +       +       E  P  V         K   N+ + +
Sbjct: 237 DGKTLNIDKIEKLLENIREILGKDGRIFFGTFPSEVRPEHVNDETVDLILKYADNKNLVI 296

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS  ++ L    R H   +   A++ A      +S D I+ LP +T    E  ++   
Sbjct: 297 GAQSGSQRILDLCNRGHTVEDIYNAVNTAIKKGVSVSLDFIFGLPGETEEDVEKTIKVMK 356

Query: 196 SYAVDHLSLYQLTIE--KGTLFYK 217
                   ++         T F K
Sbjct: 357 DLIKMGAKIHAHAFMPLPQTPFAK 380


>gi|134045128|ref|YP_001096614.1| radical SAM family protein [Methanococcus maripaludis C5]
 gi|132662753|gb|ABO34399.1| conserved hypothetical radical SAM protein [Methanococcus
           maripaludis C5]
          Length = 332

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 84/225 (37%), Gaps = 11/225 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQNI 89
           C +C      R   V   N   S   +++   +    + I    ++F  GT +   P+ +
Sbjct: 68  CIFC--PKMGRPISVEYCNIKYSLKDQIETQVKQNKEKGIGKFYVYFYPGTNTHGTPERL 125

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQSL 145
             + D      +    + I+I   P  +E           ++     I LG+Q++ +++L
Sbjct: 126 KELWD---YALSFEDVIGISIGTRPDCLEDEKLDILENYVKQGYEIWIDLGIQTMHDKTL 182

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            FL R H++++    +   +     +   +I  LP ++        +      +D L +Y
Sbjct: 183 DFLNRKHSSNDIRRVLIECKKRGILVCGHIILGLPDESWNMMMETSKMLSDLEIDALKIY 242

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T   +++  G+     E   + L +      S + +  
Sbjct: 243 PLVVIENTELEEIYWKGEYKSLDEKQYIHLVSDFLEHLSPYVIIQ 287


>gi|331250023|ref|XP_003337624.1| hypothetical protein PGTG_19444 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309316614|gb|EFP93205.1| hypothetical protein PGTG_19444 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 538

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 123/374 (32%), Gaps = 61/374 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS     + +RQ
Sbjct: 88  CPHIAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQSQGRV-EQLRQ 146

Query: 65  LTGPRSISSIFFGGGTPSLIEP-------QNIALILDGI----------AKNWTVSSNVE 107
           L            GGT   +           +   L G                 +  + 
Sbjct: 147 LGHSVDKVEFIVMGGTFMSLPASYRDTFIAQLHNSLSGYTGTDLDSAVLYSELARTKCIG 206

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +   A++ 
Sbjct: 207 ITIETRPDYCLEPHLTSMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRATCESFQKAKDA 266

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       +  D L +Y L + +GT  Y++ + G  
Sbjct: 267 GFKVVSHMMPDLPNVGVERDLEQFKEYFENPAFRSDGLKIYPLLVIRGTGVYELWRTGRY 326

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDY 275
              + N  V   ++   I +        Y +     +   S       L  L   R  D+
Sbjct: 327 KNYTPNALV---DIVARILALIPPWTRVYRVQRDIPMPLVSSGVENGNLRELALQRLKDF 383

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
             +        +VG H +   +       +++VR++  A    E FLS E  A + L+  
Sbjct: 384 GAV-CRDIRHREVGIHEIHFKVRPDQ---VELVRRDYVANGGWETFLSYEDPAKDILIGL 439

Query: 335 LRLREGISVKDWEM 348
           LRLR+      +  
Sbjct: 440 LRLRKCSPEGTFRK 453


>gi|331243335|ref|XP_003334311.1| elongator complex protein 3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313301|gb|EFP89892.1| elongator complex protein 3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 538

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 123/374 (32%), Gaps = 61/374 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS     + +RQ
Sbjct: 88  CPHIAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQSQGRV-EQLRQ 146

Query: 65  LTGPRSISSIFFGGGTPSLIEP-------QNIALILDGI----------AKNWTVSSNVE 107
           L            GGT   +           +   L G                 +  + 
Sbjct: 147 LGHSVDKVEFIVMGGTFMSLPASYRDTFIAQLHNSLSGYTGTDLDSAVLYSELARTKCIG 206

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +   A++ 
Sbjct: 207 ITIETRPDYCLEPHLTSMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRATCESFQKAKDA 266

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       +  D L +Y L + +GT  Y++ + G  
Sbjct: 267 GFKVVSHMMPDLPNVGVERDLEQFKEYFENPAFRSDGLKIYPLLVIRGTGVYELWRTGRY 326

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDY 275
              + N  V   ++   I +        Y +     +   S       L  L   R  D+
Sbjct: 327 KNYTPNALV---DIVARILALIPPWTRVYRVQRDIPMPLVSSGVENGNLRELALQRLKDF 383

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
             +        +VG H +   +       +++VR++  A    E FLS E  A + L+  
Sbjct: 384 GAV-CRDIRHREVGIHEIHFKVRPDQ---VELVRRDYVANGGWETFLSYEDPAKDILIGL 439

Query: 335 LRLREGISVKDWEM 348
           LRLR+      +  
Sbjct: 440 LRLRKCSPEGTFRK 453


>gi|168231940|ref|ZP_02656998.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194472127|ref|ZP_03078111.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458491|gb|EDX47330.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205333794|gb|EDZ20558.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 309

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +  ++    LQR +   VD L L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQSECLQTLQRVVETGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|187731284|ref|YP_001881875.1| radical SAM protein [Shigella boydii CDC 3083-94]
 gi|187428276|gb|ACD07550.1| radical SAM protein, TIGR01212 family [Shigella boydii CDC 3083-94]
          Length = 309

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 78/231 (33%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L    +             T    ++   IS  + 
Sbjct: 217 HIVKGSIMAKAWEAGRLNGIEQEDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|288871649|ref|ZP_06118400.2| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
 gi|288862633|gb|EFC94931.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
          Length = 87

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)

Query: 15  GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
               L +YVH PFC KKC YCDF S     ++ +E +    L E++          I +I
Sbjct: 3   NKKKLEIYVHIPFCAKKCAYCDFLSFPGNMRMRRE-YTDKLLEEIRIQSSFVREYQIDTI 61

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNW 100
           F GGGTPS+++  +I  I+  + +++
Sbjct: 62  FLGGGTPSVLDAADITAIMGALKEHY 87


>gi|284519770|gb|ADB92637.1| putative histone acetyltransferase ELP3 [Hordeum vulgare]
 gi|326506608|dbj|BAJ91345.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326530091|dbj|BAK08325.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 119/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 121 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 179

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D                   +    + 
Sbjct: 180 LGHSADKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHSAVKCIG 239

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 240 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFSLAKDA 299

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 300 GFKVVAHMMPDLPNVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 359

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 360 RNYPPELLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 415

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 416 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANDGWETFLSYEDTRQDILIGL 472

Query: 335 LRLRE 339
           LRLR+
Sbjct: 473 LRLRK 477


>gi|242076282|ref|XP_002448077.1| hypothetical protein SORBIDRAFT_06g020610 [Sorghum bicolor]
 gi|241939260|gb|EES12405.1| hypothetical protein SORBIDRAFT_06g020610 [Sorghum bicolor]
          Length = 571

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 119/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 123 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 181

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D                   +    + 
Sbjct: 182 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAICYSEHSAVKCIG 241

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 242 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 301

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 302 GFKVVAHMMPDLPNVGVERDLESFREFFESPAFRADGLKIYPTLVIRGTGLYELWKTGRY 361

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 362 RNYPPELLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 417

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 418 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANEGWETFLSYEDTRQDILIGL 474

Query: 335 LRLRE 339
           LRLR+
Sbjct: 475 LRLRK 479


>gi|118579179|ref|YP_900429.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118501889|gb|ABK98371.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 623

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 10/196 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C + CDF  +  R + G   F    L  ++   +      +S +F    T +    Q++ 
Sbjct: 192 CAFSCDFC-YDARGESGVRRF---SLERVEAELRYFAAAEVSQVFVLDSTFN----QDVG 243

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
                +     ++       E     ++    + +     + + +G+QS + + LR +GR
Sbjct: 244 RAKAILRLIRKIAPRTHFHFEVRCEFLDGEMARLFAGITCS-LQIGLQSADPRVLRQVGR 302

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
           +       A + L         FDL+Y LP  ++  +   +  ALS   +HL ++ L I 
Sbjct: 303 SFRRDAFAAKVALLNRSGAVFGFDLMYGLPGDSLEGFRESVDYALSLYPNHLDIFPLAIL 362

Query: 211 KGTLFYKMHKDGDLVL 226
            GT          L  
Sbjct: 363 PGTALAARADADGLCH 378


>gi|224585126|ref|YP_002638925.1| hypothetical protein SPC_3399 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469654|gb|ACN47484.1| hypothetical protein SPC_3399 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 309

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 83/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P+ V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPNCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDETLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +  ++    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQSECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|188996208|ref|YP_001930459.1| conserved hypothetical radical SAM protein [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188931275|gb|ACD65905.1| conserved hypothetical radical SAM protein [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 307

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 73/220 (33%), Gaps = 18/220 (8%)

Query: 32  CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C+   F+ +    +  ++         M++ +           +F   T +    + 
Sbjct: 41  CTFCNNESFSPYAMTKQTVKDQ----IEKSMEFYKNKFKNTKGFLAYFQAFTNTYAPVEK 96

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQS 144
           +  + D       +   + ++I   P  V            + +    +  G+Q+   ++
Sbjct: 97  LREVYDQAMSYPEI---IGMSIGTRPDCVPEEVLDLIASYTIEKPEIWVEYGLQTAHYKT 153

Query: 145 LRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + R H  SE + A+    +    ++   +I  LP +         +   +  +D + 
Sbjct: 154 LKKINRAHGVSEFVDAVLRTKKRSSIKICVHVILGLPGEDYDDMMETAKLIAALPIDGIK 213

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           ++ L I K T   K +  G++             L     
Sbjct: 214 IHPLHIVKHTAMEKQYHRGEIKELDMKEYAK---LAVDFL 250


>gi|217970434|ref|YP_002355668.1| hypothetical protein Tmz1t_2022 [Thauera sp. MZ1T]
 gi|217507761|gb|ACK54772.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 338

 Score = 85.3 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 6/212 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+       Y   ++   +     ++++ +     +    +F   + +       A 
Sbjct: 72  CTFCNNAGFTPGYLDRRDPIGEQIDAGLRFLDRRYPGTARFIAYFQTYSNTY---GEFAR 128

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +             + I   P  +     +      +  +  + +GV+S +++ LR +
Sbjct: 129 LRESYEAALAHPRICGLAIGTRPDCLPDVVLDYLAELAREHIVELEIGVESCDDEVLRRI 188

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ + +  AI  A      ++  LI  LP +T        +R  +  V  L L+QL 
Sbjct: 189 NRGHDFACSEEAIRRAAARGLGVTAHLILGLPGETRAGMLEAARRLSALPVAALKLHQLQ 248

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           + +GT   +  +     +P       +  L  
Sbjct: 249 LVRGTAMARDWERDPASVPLLAEDEYIALLAD 280


>gi|320174577|gb|EFW49713.1| hypothetical protein SDB_02919 [Shigella dysenteriae CDC 74-1112]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWETGRLN 234


>gi|303228990|ref|ZP_07315800.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516404|gb|EFL58336.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 325

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 14/210 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +  ++ 
Sbjct: 48  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLPLEDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQS 144
              ++       +   V I I   P  +        +           I LG+Q++   +
Sbjct: 105 KSYMEQGC----IDEAVGIAIATRPDCISNEYLDVLQDIQQRFHKDIYIELGLQTVNYHT 160

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   S  VD + L
Sbjct: 161 LEKINRGHDLAQFIDAVLRIKRYGFNVTTHMIVNLPWDTMEDTIEGAKILSSLGVDQVKL 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + L I K TL  K +++G + L S     +
Sbjct: 221 HALYIVKHTLMAKWYEEGQITLISAEEYAE 250


>gi|300990941|ref|ZP_07179393.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 45-1]
 gi|300407017|gb|EFJ90555.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 45-1]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQVNI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|56415258|ref|YP_152333.1| hypothetical protein SPA3197 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364188|ref|YP_002143825.1| hypothetical protein SSPA2984 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56129515|gb|AAV79021.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095665|emb|CAR61233.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|150391412|ref|YP_001321461.1| putative radical SAM protein [Alkaliphilus metalliredigens QYMF]
 gi|149951274|gb|ABR49802.1| conserved hypothetical radical SAM protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 315

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 80/229 (34%), Gaps = 20/229 (8%)

Query: 32  CPYC-----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C +C      F      Y+V     ++       ++++        + +F   + + +  
Sbjct: 46  CTFCAEVGTGFECLPNSYEV-----VEQLEKNKSYIQKKYKANKFIA-YFQNFSNTYMPF 99

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLE 141
           +     ++       V   VEI I   P  +        +           I LG+Q++ 
Sbjct: 100 EQFQKYIEEA----IVEDVVEIAISTRPDCINDKYLGFLQSLQEKHHIEFSIELGLQTVN 155

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             +L  + R H  +E I A+   +     +   LI  LP  T T      +   +  ++ 
Sbjct: 156 YHTLNKINRGHTLAEFIDAVLRIKRYGFPICAHLILNLPWDTETDVIENAKIMSALGIEQ 215

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + L+ L I + T   KM+++ +  + S     +   +     S+H +  
Sbjct: 216 VKLHGLYIMENTAMGKMYENKEFQMISVEEYQERVMIFLEYLSSHIVVQ 264


>gi|224119572|ref|XP_002318107.1| histone acetyltransferase [Populus trichocarpa]
 gi|222858780|gb|EEE96327.1| histone acetyltransferase [Populus trichocarpa]
          Length = 563

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 124/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 115 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 173

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +                +  + 
Sbjct: 174 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIG 233

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 234 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 293

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 294 GFKVVAHMMPDLPNVGVERDLESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRY 353

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I +        Y +          S +   +L  L   R  D 
Sbjct: 354 RNYPPEQLV---DIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 409

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I+  PE  +++VR++  A    E FLS E    + L+  
Sbjct: 410 LGLKCRDVRTREAGIQDIHHKIK--PEE-VQLVRRDYTANEGWETFLSYEDTRQDILVGL 466

Query: 335 LRLRE 339
           LRLR+
Sbjct: 467 LRLRK 471


>gi|315181103|gb|ADT88017.1| radical SAM protein, family/Predicted Fe-S oxidoreductase [Vibrio
           furnissii NCTC 11218]
          Length = 286

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 80/236 (33%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        + +  +S   ++               +F   
Sbjct: 9   CPNRDGTIGRGGCTFCNVASFA-----DEASQAKSIEDQLTDRAGEVQRAKKYLAYFQAY 63

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +   +    G      L
Sbjct: 64  TSTY---AEVQVLKSMYEQALKAADIVGLCVGTRPDCVPDAVLELLAEYAQQGFEIWLEL 120

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LPK+        L++ L
Sbjct: 121 GLQTANDQTLKRINRGHDFACYAEITRRARALGIKVCTHLIVGLPKEGRDDNLATLEQVL 180

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHA 250
           +   D + L+ L I +G+   K  + G L  P+ +        + Q        H 
Sbjct: 181 AVGTDGIKLHGLHIVEGSTMAKAWRAGKLEAPTLDEYVAIACEMIQHTPPEVVFHR 236


>gi|115459056|ref|NP_001053128.1| Os04g0484900 [Oryza sativa Japonica Group]
 gi|75232157|sp|Q7X7L3|ELP3_ORYSJ RecName: Full=Elongator complex protein 3; AltName: Full=Elongator
           component 3
 gi|38345341|emb|CAE03152.2| OSJNBa0081L15.14 [Oryza sativa Japonica Group]
 gi|38346050|emb|CAE02005.2| OJ000223_09.4 [Oryza sativa Japonica Group]
 gi|90265118|emb|CAC09485.2| H0811E11.1 [Oryza sativa Indica Group]
 gi|113564699|dbj|BAF15042.1| Os04g0484900 [Oryza sativa Japonica Group]
 gi|116310479|emb|CAH67482.1| H0805A05.12 [Oryza sativa Indica Group]
 gi|125548774|gb|EAY94596.1| hypothetical protein OsI_16373 [Oryza sativa Indica Group]
 gi|215768603|dbj|BAH00832.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 573

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 118/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 125 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 183

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D                        + 
Sbjct: 184 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVKCIG 243

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 244 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 303

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 304 GFKVVAHMMPDLPNVGVERDLESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 363

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 364 RNYPPELLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 419

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 420 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANEGWETFLSYEDTQQDILIGL 476

Query: 335 LRLRE 339
           LRLR+
Sbjct: 477 LRLRK 481


>gi|331674738|ref|ZP_08375497.1| radical SAM protein, family [Escherichia coli TA280]
 gi|331068177|gb|EGI39573.1| radical SAM protein, family [Escherichia coli TA280]
          Length = 320

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGHAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|301022113|ref|ZP_07186039.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 69-1]
 gi|300397709|gb|EFJ81247.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 69-1]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGKAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|204931169|ref|ZP_03221963.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204319936|gb|EDZ05142.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD L L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|295097705|emb|CBK86795.1| radical SAM protein, TIGR01212 family [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 327

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +    +S   ++     L         +F   
Sbjct: 47  CPNRDGTIGRGGCTFCNVASFA-----DEAQQHKSIAEQLAHQASLVNRAKQYLAYFQAY 101

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  +         +   V + +   P  V     +    Y++ G      L
Sbjct: 102 TSTWAEVQVLRSMYQQAVAQANI---VGLCVGTRPDCVPEAVLDLLSEYKEKGYEIWLEL 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L  + R H+ +       LAR    ++   LI  LP +        L++ +
Sbjct: 159 GLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQQHGLETLEKVV 218

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              VD + L+ L I KG++  K  + G L     +            T    ++   IS 
Sbjct: 219 ETGVDGIKLHPLHIVKGSIMAKAWEAGRLSGIELDDYTVTAGEMIRHTPPEIVYH-RISA 277

Query: 256 HSF 258
            + 
Sbjct: 278 SAR 280


>gi|323979072|gb|EGB74150.1| SAM protein [Escherichia coli TW10509]
          Length = 320

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHHSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L     +            T    ++   IS  + 
Sbjct: 228 HIVKGSIMAKAWEAGRLNGIELDDYTVTAGEMIRHTPPEVIYH-RISASAR 277


>gi|300929907|ref|ZP_07145349.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 187-1]
 gi|300462193|gb|EFK25686.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 187-1]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|309703637|emb|CBJ02977.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
 gi|332086331|gb|EGI91483.1| radical SAM superfamily protein [Shigella boydii 5216-82]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|305664205|ref|YP_003860493.1| histone acetyltransferase, ELP3 family [Ignisphaera aggregans DSM
           17230]
 gi|304378774|gb|ADM28613.1| histone acetyltransferase, ELP3 family [Ignisphaera aggregans DSM
           17230]
          Length = 480

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 86/247 (34%), Gaps = 43/247 (17%)

Query: 28  CVK-KCPYCD----FN---SHVRRYKVGQ-------ENFIQSFLTEMQWMRQLTGPRSIS 72
           C   KC YC     F    S++ R            + + Q+ L   Q+      P  + 
Sbjct: 30  CPHGKCIYCPGGPEFGTPQSYIGREPALMRGLQTNFDPYEQTQLRLRQYEVNGHIPSKVE 89

Query: 73  SIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSNV-------------------EIT 109
            I  GG T + +        I  I + + +      +V                    +T
Sbjct: 90  VIVMGG-TFTAMPRDYQEWFITNIFEAVNRYPEPKPSVLPSLEEAHLRNETARIRVVGLT 148

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P   +          G  ++ +GVQS+ +  L+++ R H   + I A  L ++   
Sbjct: 149 IETRPDWAKEKQIDFMLYLGATKVEIGVQSIYDDVLKYINRGHTVKDVIEATRLLKDAGF 208

Query: 170 RMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++ + ++  LPK    +      E+     +  D L +Y   + +GT  Y++     L  
Sbjct: 209 KVVYHIMPRLPKSDRDRDIAMIREIFENPDFRPDMLKIYPTLVIEGTKLYEL-WRQGLYK 267

Query: 227 PSENVAV 233
           P  +   
Sbjct: 268 PLTDEEA 274


>gi|110643452|ref|YP_671182.1| hypothetical protein ECP_3299 [Escherichia coli 536]
 gi|191174418|ref|ZP_03035921.1| radical SAM protein, TIGR01212 family [Escherichia coli F11]
 gi|227887932|ref|ZP_04005737.1| radical SAM protein [Escherichia coli 83972]
 gi|300979940|ref|ZP_07174792.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 200-1]
 gi|301047942|ref|ZP_07194987.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 185-1]
 gi|110345044|gb|ABG71281.1| hypothetical protein YhcC [Escherichia coli 536]
 gi|190905308|gb|EDV64944.1| radical SAM protein, TIGR01212 family [Escherichia coli F11]
 gi|227835328|gb|EEJ45794.1| radical SAM protein [Escherichia coli 83972]
 gi|300300174|gb|EFJ56559.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 185-1]
 gi|300307875|gb|EFJ62395.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 200-1]
 gi|307555304|gb|ADN48079.1| radical SAM protein [Escherichia coli ABU 83972]
 gi|315294871|gb|EFU54210.1| radical SAM protein family [Escherichia coli MS 153-1]
 gi|320194696|gb|EFW69326.1| hypothetical protein EcoM_03138 [Escherichia coli WV_060327]
 gi|324012145|gb|EGB81364.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 60-1]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|293412583|ref|ZP_06655306.1| TIGR01212 family radical SAM protein [Escherichia coli B354]
 gi|291469354|gb|EFF11845.1| TIGR01212 family radical SAM protein [Escherichia coli B354]
          Length = 320

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|331649011|ref|ZP_08350099.1| radical SAM protein, family [Escherichia coli M605]
 gi|323951270|gb|EGB47145.1| SAM protein [Escherichia coli H252]
 gi|323957641|gb|EGB53355.1| SAM protein [Escherichia coli H263]
 gi|331042758|gb|EGI14900.1| radical SAM protein, family [Escherichia coli M605]
          Length = 320

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|293416640|ref|ZP_06659279.1| TIGR01212 family radical SAM protein [Escherichia coli B185]
 gi|291431996|gb|EFF04979.1| TIGR01212 family radical SAM protein [Escherichia coli B185]
          Length = 320

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|288817976|ref|YP_003432323.1| putative Fe-S oxidoreductase [Hydrogenobacter thermophilus TK-6]
 gi|288787375|dbj|BAI69122.1| putative Fe-S oxidoreductase [Hydrogenobacter thermophilus TK-6]
 gi|308751574|gb|ADO45057.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
          Length = 313

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 81/241 (33%), Gaps = 23/241 (9%)

Query: 26  PF-CVKK--------CPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISS 73
           PF C           C YC   S  R   +  + +I         ++  ++  G   +  
Sbjct: 32  PFTCPNIDGTKARGGCTYC--FSGTRPAHL--DAYIPLRDQIEDGIRRAKERYGKNILFF 87

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
           +++   + +  E + +  + D           V I +   P           + Y + G+
Sbjct: 88  VYYQSYSNTYGEYEYLKSVYDTA---LEFEEVVGIDVGTRPDCAPEWVLELLESYTRMGL 144

Query: 131 NRI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
                 G+QS   ++LR + R H  S+ + A+   +    ++   +I  LP +       
Sbjct: 145 EVWVEYGLQSANFKTLRLINRAHGVSDFVDAVLRTKRRNLKVCAHIILGLPHEDEEDMLE 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             +   S  +D + ++ L + K T   + +  G+  + S             I   H + 
Sbjct: 205 TGKLLASLPIDGVKIHPLHVIKNTKMAEQYLRGEFEVLSLEEYAKRAVDVLEILPPHVVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|170018539|ref|YP_001723493.1| putative radical SAM protein [Escherichia coli ATCC 8739]
 gi|254038376|ref|ZP_04872434.1| radical SAM protein [Escherichia sp. 1_1_43]
 gi|293406820|ref|ZP_06650746.1| radical SAM protein [Escherichia coli FVEC1412]
 gi|298382561|ref|ZP_06992158.1| yhcC protein [Escherichia coli FVEC1302]
 gi|331643909|ref|ZP_08345040.1| radical SAM protein, family [Escherichia coli H736]
 gi|331654815|ref|ZP_08355815.1| radical SAM protein, family [Escherichia coli M718]
 gi|169753467|gb|ACA76166.1| conserved hypothetical radical SAM protein [Escherichia coli ATCC
           8739]
 gi|226840000|gb|EEH72021.1| radical SAM protein [Escherichia sp. 1_1_43]
 gi|291426826|gb|EFE99858.1| radical SAM protein [Escherichia coli FVEC1412]
 gi|298277701|gb|EFI19217.1| yhcC protein [Escherichia coli FVEC1302]
 gi|315137797|dbj|BAJ44956.1| radical SAM protein [Escherichia coli DH1]
 gi|323936095|gb|EGB32389.1| radical SAM protein [Escherichia coli E1520]
 gi|323941689|gb|EGB37868.1| SAM protein [Escherichia coli E482]
 gi|323961134|gb|EGB56748.1| SAM protein [Escherichia coli H489]
 gi|323970226|gb|EGB65497.1| SAM protein [Escherichia coli TA007]
 gi|324119576|gb|EGC13458.1| SAM protein [Escherichia coli E1167]
 gi|331037380|gb|EGI09604.1| radical SAM protein, family [Escherichia coli H736]
 gi|331048197|gb|EGI20274.1| radical SAM protein, family [Escherichia coli M718]
          Length = 320

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|302336845|ref|YP_003802051.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634030|gb|ADK79457.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 533

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 71/190 (37%), Gaps = 14/190 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C        ++      ++ F +  +    +L     +  +F     P+    
Sbjct: 174 CPFRCHFC--------FESKGSEQVRYFSMERITRELELFARSGVRELFI--LDPTF--N 221

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N       +     V+ ++   IE     ++    + +     + + +G+QS + + LR
Sbjct: 222 HNRTRAKKLLRLMQEVAPDIHYNIEVRSEFLDQELAELFSCLSCS-LQIGLQSADPKVLR 280

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R+    +    +           FDLIY LP  ++  +   +  A S   +H+ ++ 
Sbjct: 281 NINRSIKQDDFRRKVLFLHEAEVVYGFDLIYGLPGDSLEGFLASIDFAFSMVPNHIDIFP 340

Query: 207 LTIEKGTLFY 216
           L +  GT+ +
Sbjct: 341 LAVLPGTVLF 350


>gi|260767344|ref|ZP_05876283.1| hypothetical protein VFA_000397 [Vibrio furnissii CIP 102972]
 gi|260617667|gb|EEX42847.1| hypothetical protein VFA_000397 [Vibrio furnissii CIP 102972]
          Length = 310

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 78/224 (34%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        + +  +S   ++               +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEASQAKSIEDQLTDRAGEVQRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   +    G      LG+Q+  +Q+L+ 
Sbjct: 97  LKSMYEQALKAADIVGLCVGTRPDCVPDAVLELLAEYAQQGFEIWLELGLQTANDQTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR +  ++   LI  LPK+        L++ L+   D + L+ L
Sbjct: 157 INRGHDFACYAEITRRARALGIKVCTHLIVGLPKEGRDDNLATLEQVLAVGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHA 250
            I +G+   K  + G L  P+ +        + Q        H 
Sbjct: 217 HIVEGSTMAKAWRAGKLEAPTLDEYVAIACEMIQRTPPEVVFHR 260


>gi|213417169|ref|ZP_03350313.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 255

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG+   K  + G L 
Sbjct: 217 HIVKGSTMAKAWEAGRLN 234


>gi|117625503|ref|YP_858826.1| putative Fe-S oxidoreductase [Escherichia coli APEC O1]
 gi|170683121|ref|YP_001745483.1| radical SAM family protein [Escherichia coli SMS-3-5]
 gi|215488527|ref|YP_002330958.1| predicted Fe-S oxidoreductase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218560281|ref|YP_002393194.1| Fe-S oxidoreductase [Escherichia coli S88]
 gi|237706037|ref|ZP_04536518.1| radical SAM protein [Escherichia sp. 3_2_53FAA]
 gi|306816447|ref|ZP_07450579.1| putative Fe-S oxidoreductase [Escherichia coli NC101]
 gi|312968450|ref|ZP_07782659.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|115514627|gb|ABJ02702.1| putative Fe-S oxidoreductase [Escherichia coli APEC O1]
 gi|170520839|gb|ACB19017.1| radical SAM protein, TIGR01212 family [Escherichia coli SMS-3-5]
 gi|215266599|emb|CAS11038.1| predicted Fe-S oxidoreductase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218367050|emb|CAR04821.1| putative Fe-S oxidoreductase [Escherichia coli S88]
 gi|222034928|emb|CAP77671.1| Uncharacterized protein yhcC [Escherichia coli LF82]
 gi|226899077|gb|EEH85336.1| radical SAM protein [Escherichia sp. 3_2_53FAA]
 gi|281180253|dbj|BAI56583.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294491155|gb|ADE89911.1| radical SAM protein, TIGR01212 family [Escherichia coli IHE3034]
 gi|305850012|gb|EFM50471.1| putative Fe-S oxidoreductase [Escherichia coli NC101]
 gi|307625190|gb|ADN69494.1| putative Fe-S oxidoreductase [Escherichia coli UM146]
 gi|312286668|gb|EFR14579.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|312947768|gb|ADR28595.1| putative Fe-S oxidoreductase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315288990|gb|EFU48388.1| radical SAM protein family [Escherichia coli MS 110-3]
 gi|323189168|gb|EFZ74452.1| radical SAM superfamily protein [Escherichia coli RN587/1]
 gi|324008723|gb|EGB77942.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 57-2]
 gi|330909263|gb|EGH37777.1| putative Fe-S oxidoreductase [Escherichia coli AA86]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|26249797|ref|NP_755837.1| hypothetical protein c3971 [Escherichia coli CFT073]
 gi|26110225|gb|AAN82411.1|AE016767_171 Hypothetical protein yhcC [Escherichia coli CFT073]
          Length = 288

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 24  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 78

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 79  MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 135

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 136 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 195

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 196 HIVKGSIMAKAWEAGRLN 213


>gi|15803751|ref|NP_289785.1| hypothetical protein Z4575 [Escherichia coli O157:H7 EDL933]
 gi|15833344|ref|NP_312117.1| hypothetical protein ECs4090 [Escherichia coli O157:H7 str. Sakai]
 gi|16131101|ref|NP_417678.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|82545552|ref|YP_409499.1| hypothetical protein SBO_3171 [Shigella boydii Sb227]
 gi|89109974|ref|AP_003754.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           W3110]
 gi|157156653|ref|YP_001464689.1| radical SAM family protein [Escherichia coli E24377A]
 gi|157162695|ref|YP_001460013.1| radical SAM family protein [Escherichia coli HS]
 gi|168751617|ref|ZP_02776639.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4113]
 gi|168754193|ref|ZP_02779200.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4401]
 gi|168763748|ref|ZP_02788755.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4501]
 gi|168769067|ref|ZP_02794074.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4486]
 gi|168777266|ref|ZP_02802273.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4196]
 gi|168781355|ref|ZP_02806362.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4076]
 gi|168786097|ref|ZP_02811104.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC869]
 gi|168800925|ref|ZP_02825932.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC508]
 gi|170082745|ref|YP_001732065.1| Fe-S oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
 gi|188493228|ref|ZP_03000498.1| radical SAM protein, TIGR01212 family [Escherichia coli 53638]
 gi|193070333|ref|ZP_03051276.1| radical SAM protein, TIGR01212 family [Escherichia coli E110019]
 gi|194439156|ref|ZP_03071237.1| radical SAM protein, TIGR01212 family [Escherichia coli 101-1]
 gi|195939411|ref|ZP_03084793.1| putative radical SAM protein [Escherichia coli O157:H7 str. EC4024]
 gi|208808640|ref|ZP_03250977.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4206]
 gi|208811982|ref|ZP_03253311.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4045]
 gi|208820153|ref|ZP_03260473.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4042]
 gi|209396579|ref|YP_002272681.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4115]
 gi|217327697|ref|ZP_03443780.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. TW14588]
 gi|218706831|ref|YP_002414350.1| putative Fe-S oxidoreductase [Escherichia coli UMN026]
 gi|238902313|ref|YP_002928109.1| putative Fe-S oxidoreductase [Escherichia coli BW2952]
 gi|253771955|ref|YP_003034786.1| hypothetical protein ECBD_0531 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163153|ref|YP_003046261.1| putative Fe-S oxidoreductase [Escherichia coli B str. REL606]
 gi|254795160|ref|YP_003079997.1| putative Fe-S oxidoreductase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256024214|ref|ZP_05438079.1| putative radical SAM protein [Escherichia sp. 4_1_40B]
 gi|261228222|ref|ZP_05942503.1| putative radical SAM protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255078|ref|ZP_05947611.1| putative radical SAM protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284585|ref|YP_003501403.1| hypothetical protein G2583_3937 [Escherichia coli O55:H7 str.
           CB9615]
 gi|297518050|ref|ZP_06936436.1| putative Fe-S oxidoreductase [Escherichia coli OP50]
 gi|300897979|ref|ZP_07116355.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 198-1]
 gi|300918973|ref|ZP_07135528.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 115-1]
 gi|300926044|ref|ZP_07141866.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 182-1]
 gi|300948866|ref|ZP_07162931.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 116-1]
 gi|300955800|ref|ZP_07168142.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 175-1]
 gi|301025887|ref|ZP_07189374.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 196-1]
 gi|301326356|ref|ZP_07219720.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 78-1]
 gi|301644925|ref|ZP_07244894.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 146-1]
 gi|307139897|ref|ZP_07499253.1| putative Fe-S oxidoreductase [Escherichia coli H736]
 gi|312972513|ref|ZP_07786687.1| radical SAM superfamily protein [Escherichia coli 1827-70]
 gi|83288025|sp|P0ADW7|YHCC_ECO57 RecName: Full=Uncharacterized protein yhcC
 gi|83288026|sp|P0ADW6|YHCC_ECOLI RecName: Full=Uncharacterized protein yhcC
 gi|12517832|gb|AAG58345.1|AE005549_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|2367204|gb|AAC76243.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363563|dbj|BAB37513.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|81246963|gb|ABB67671.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|85676005|dbj|BAE77255.1| predicted Fe-S oxidoreductase [Escherichia coli str. K12 substr.
           W3110]
 gi|157068375|gb|ABV07630.1| radical SAM protein, TIGR01212 family [Escherichia coli HS]
 gi|157078683|gb|ABV18391.1| radical SAM protein, TIGR01212 family [Escherichia coli E24377A]
 gi|169890580|gb|ACB04287.1| predicted Fe-S oxidoreductase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187767452|gb|EDU31296.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4196]
 gi|188014384|gb|EDU52506.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4113]
 gi|188488427|gb|EDU63530.1| radical SAM protein, TIGR01212 family [Escherichia coli 53638]
 gi|189001123|gb|EDU70109.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4076]
 gi|189358494|gb|EDU76913.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4401]
 gi|189361828|gb|EDU80247.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4486]
 gi|189366158|gb|EDU84574.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4501]
 gi|189374098|gb|EDU92514.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC869]
 gi|189376866|gb|EDU95282.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC508]
 gi|192956392|gb|EDV86852.1| radical SAM protein, TIGR01212 family [Escherichia coli E110019]
 gi|194421852|gb|EDX37858.1| radical SAM protein, TIGR01212 family [Escherichia coli 101-1]
 gi|208728441|gb|EDZ78042.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4206]
 gi|208733259|gb|EDZ81946.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4045]
 gi|208740276|gb|EDZ87958.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4042]
 gi|209157979|gb|ACI35412.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. EC4115]
 gi|209757928|gb|ACI77276.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757930|gb|ACI77277.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757932|gb|ACI77278.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757934|gb|ACI77279.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|209757936|gb|ACI77280.1| hypothetical protein ECs4090 [Escherichia coli]
 gi|217320064|gb|EEC28489.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. TW14588]
 gi|218433928|emb|CAR14845.1| putative Fe-S oxidoreductase [Escherichia coli UMN026]
 gi|238862383|gb|ACR64381.1| predicted Fe-S oxidoreductase [Escherichia coli BW2952]
 gi|242378754|emb|CAQ33544.1| predicted Fe-S oxidoreductase [Escherichia coli BL21(DE3)]
 gi|253322999|gb|ACT27601.1| conserved hypothetical protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975054|gb|ACT40725.1| predicted Fe-S oxidoreductase [Escherichia coli B str. REL606]
 gi|253979210|gb|ACT44880.1| predicted Fe-S oxidoreductase [Escherichia coli BL21(DE3)]
 gi|254594560|gb|ACT73921.1| predicted Fe-S oxidoreductase [Escherichia coli O157:H7 str.
           TW14359]
 gi|260447762|gb|ACX38184.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|284923233|emb|CBG36327.1| radical SAM superfamily protein [Escherichia coli 042]
 gi|290764458|gb|ADD58419.1| hypothetical protein G2583_3937 [Escherichia coli O55:H7 str.
           CB9615]
 gi|299879909|gb|EFI88120.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 196-1]
 gi|300317346|gb|EFJ67130.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 175-1]
 gi|300358327|gb|EFJ74197.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 198-1]
 gi|300413915|gb|EFJ97225.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 115-1]
 gi|300417902|gb|EFK01213.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 182-1]
 gi|300451671|gb|EFK15291.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 116-1]
 gi|300846920|gb|EFK74680.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 78-1]
 gi|301076776|gb|EFK91582.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 146-1]
 gi|310334890|gb|EFQ01095.1| radical SAM superfamily protein [Escherichia coli 1827-70]
 gi|315617018|gb|EFU97628.1| radical SAM superfamily protein [Escherichia coli 3431]
 gi|320181486|gb|EFW56404.1| hypothetical protein SGB_01356 [Shigella boydii ATCC 9905]
 gi|320186697|gb|EFW61421.1| hypothetical protein SGF_01146 [Shigella flexneri CDC 796-83]
 gi|320189564|gb|EFW64223.1| hypothetical protein ECoD_04571 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640282|gb|EFX09854.1| putative Fe-S oxidoreductase [Escherichia coli O157:H7 str. G5101]
 gi|320645579|gb|EFX14588.1| putative Fe-S oxidoreductase [Escherichia coli O157:H- str. 493-89]
 gi|320650889|gb|EFX19346.1| putative Fe-S oxidoreductase [Escherichia coli O157:H- str. H 2687]
 gi|320656270|gb|EFX24182.1| putative Fe-S oxidoreductase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320661960|gb|EFX29368.1| putative Fe-S oxidoreductase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666795|gb|EFX33774.1| putative Fe-S oxidoreductase [Escherichia coli O157:H7 str. LSU-61]
 gi|326337912|gb|EGD61746.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. 1125]
 gi|326347481|gb|EGD71206.1| radical SAM protein, TIGR01212 family [Escherichia coli O157:H7
           str. 1044]
 gi|332090883|gb|EGI95974.1| radical SAM superfamily protein [Shigella boydii 3594-74]
 gi|332345168|gb|AEE58502.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|133955098|ref|NP_506055.2| ELongator complex Protein Component family member (elpc-3)
           [Caenorhabditis elegans]
 gi|122120457|sp|Q23651|ELP3_CAEEL RecName: Full=Probable elongator complex protein 3
 gi|110431062|emb|CAB01454.2| C. elegans protein ZK863.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 547

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 126/376 (33%), Gaps = 59/376 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   +L     +
Sbjct: 95  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRGRLNQLMQL 154

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVEI 108
                       GGT   +        I  + D ++ + + S               + I
Sbjct: 155 GHSVDKVEFIVMGGTFMSLPEDYRDFFIRNLHDALSGHTSASVEEAVAYSERSKMKCIGI 214

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS  E   R   R H         H+A++  
Sbjct: 215 TIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTG 274

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + + +    EL  + ++  D L LY   + +GT  Y++ K G   
Sbjct: 275 YKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTGRYQ 334

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +V V   +L  +I S        Y +          S +   +L      +  + +
Sbjct: 335 SYPPSVLV---DLIATILSLVPPWTRVYRVQRDIPMPLVSSGVEHGNLREHAMAKMKE-L 390

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           G+        +VG   +   +   PE  ++++R++  A    E F+S E    + L+  L
Sbjct: 391 GLKCRDVRTREVGIQEIHNKVR--PED-VELIRRDYTANGGWETFISYEDPKQDILIGLL 447

Query: 336 RLREGISVKDWEMLAG 351
           RLR+         L G
Sbjct: 448 RLRKISDKAHRPELKG 463


>gi|316976239|gb|EFV59566.1| probable elongator complex protein 3 [Trichinella spiralis]
          Length = 565

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 123/370 (33%), Gaps = 71/370 (19%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+    +Q  + 
Sbjct: 114 CPHIYVTGNVCSYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQAKGRLLQLQQL 173

Query: 65  LTGPRSISSIFFGGGTPSLIE-PQN-----IALILDGIAKNWTVS-------------SN 105
                 +  I  GG   + +  P +     I  + D ++ + + +               
Sbjct: 174 GHSIDKVEYIVMGG---TFMSLPDDYRDYFIRNLHDALSGHTSRNVAEAVRYSERSKVKC 230

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  R+ +G+QS+ E   R   R H       A   A+
Sbjct: 231 IGITIETRPDYCLQRHLSQMLSYGCTRLEIGLQSIYEHVARDTNRGHTVKAVCEAFRYAK 290

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP  +  +      EL     +  D L +Y   + +GT  Y++ K G
Sbjct: 291 DAGFKVVAHMMPNLPNVSYEEDLHQFRELFENPDFRPDGLKIYPTLVIRGTGIYELWKRG 350

Query: 223 DLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYG 273
                     +    L   I       +  Y +          S +   +L  L   R  
Sbjct: 351 KYKSYPAETLI---ELLAKILEIVPPWVRVYRVQRDIPMPLVSSGVTYGNLRELVLARMK 407

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADE 329
           +         ++ +    R     E H +     ++++R++  A    E FLS E    +
Sbjct: 408 EL-------GTKCRDVRTREVGIQEIHNKVRPKNIELIRRDYEANGGLETFLSFEDPEQD 460

Query: 330 FLMMGLRLRE 339
            L+  LRLR+
Sbjct: 461 ILVGLLRLRK 470


>gi|300938127|ref|ZP_07152901.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 21-1]
 gi|331684858|ref|ZP_08385450.1| radical SAM protein, family [Escherichia coli H299]
 gi|300456890|gb|EFK20383.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 21-1]
 gi|331078473|gb|EGI49679.1| radical SAM protein, family [Escherichia coli H299]
          Length = 309

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|209920686|ref|YP_002294770.1| hypothetical protein ECSE_3495 [Escherichia coli SE11]
 gi|293449544|ref|ZP_06663965.1| TIGR01212 family radical SAM protein [Escherichia coli B088]
 gi|331679290|ref|ZP_08379962.1| radical SAM protein, family [Escherichia coli H591]
 gi|209913945|dbj|BAG79019.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|291322634|gb|EFE62063.1| TIGR01212 family radical SAM protein [Escherichia coli B088]
 gi|323946935|gb|EGB42951.1| radical SAM protein [Escherichia coli H120]
 gi|331073355|gb|EGI44678.1| radical SAM protein, family [Escherichia coli H591]
          Length = 320

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|221061559|ref|XP_002262349.1| radical SAM protein [Plasmodium knowlesi strain H]
 gi|193811499|emb|CAQ42227.1| radical SAM protein, putative [Plasmodium knowlesi strain H]
          Length = 1116

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-----------IEANPSSVEVNNFQGYRKAGVNRIS 134
             NI  +L    K +++    EI            +E  P  +        R  G  R+ 
Sbjct: 453 AANIYPLLKNRRKKFSLEKEQEINETSNCRIIGLTLETRPDQINKEELIRLRSYGCTRVQ 512

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q  ++  L+ + R     +AI AI+L +    ++   L+  LP   + +     +  
Sbjct: 513 LGIQHTDDFILKKVNRQCTLQDAIRAIYLLKENGFKVDIHLMPDLPYSDVKKDIEMFKHV 572

Query: 195 LS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           LS      D   +Y   I   T   K + + +     E   
Sbjct: 573 LSSPNLQADQWKIYPCEITPFTRIEKWYNNNEFKPYFETDK 613


>gi|327401686|ref|YP_004342525.1| histone acetyltransferase, ELP3 family [Archaeoglobus veneficus
           SNP6]
 gi|327317194|gb|AEA47810.1| histone acetyltransferase, ELP3 family [Archaeoglobus veneficus
           SNP6]
          Length = 545

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 3/151 (1%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  V +TIE  P   +  +     + G  ++ LGVQS+ +  L  + R H+ ++ I A  
Sbjct: 211 ARCVGLTIETRPDFSKREHILEMLRYGATKVELGVQSVYDDVLNLIRRGHSVADTIEATK 270

Query: 163 LARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           L ++   ++ + ++  LP        +   EL    S+  D+L +Y   + +GT  Y+  
Sbjct: 271 LLKDSAFKVGYHVMPGLPGSDFDRDVEMFKELFSNESFKPDYLKIYPTLVVEGTELYEWW 330

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           K G+    +    V+L    +          
Sbjct: 331 KAGEYRPYTTEEVVELIARAKRYLPEWVRVQ 361


>gi|312090909|ref|XP_003146791.1| hypothetical protein LOAG_11221 [Loa loa]
 gi|307758044|gb|EFO17278.1| hypothetical protein LOAG_11221 [Loa loa]
          Length = 543

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 83/259 (32%), Gaps = 45/259 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++T    +
Sbjct: 95  CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRSRVTQLMQL 154

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKN--WTVSSNVE-----------I 108
                       GGT   +        I  + D +  +   +VS  VE           I
Sbjct: 155 GHDVDKVEFVVMGGTFMSLPDDYRDYFIRNLHDALTGHTSNSVSEAVEFSERSRVKCIGI 214

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H          +A++  
Sbjct: 215 TIETRPDYCLPKHLDEMLSYGCTRLEIGVQSVYEDIARDTNRGHTVKAVCECFKMAKDTG 274

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +      EL     +  D L LY   + +GT  Y++ + G   
Sbjct: 275 YKVVIHMMPNLPNVGIERDMEQFIELFENPEFRPDGLKLYPTLVIRGTGLYELWRTGRYK 334

Query: 226 LPSENVAVDLYNLTQSITS 244
                V V   +LT  I +
Sbjct: 335 SYPPEVLV---DLTARILA 350


>gi|126458934|ref|YP_001055212.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126248655|gb|ABO07746.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 393

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 86/262 (32%), Gaps = 19/262 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF---CVKKCPYCD--FN-SHVRRYKVGQENFIQSFLTEMQ 60
           Y   +    S SLG Y        C  +C +C   F+ S   R        ++ ++   +
Sbjct: 125 YAELIHKTYSTSLGAYPPIEIMRSCAYRCTFCQTWFHGSVRYRPVENVAQMVKHYVAAGR 184

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
              +   P         G TP++     +  +L  + +            E  P +V  +
Sbjct: 185 EEIRFIAPVGFLYGSTDGKTPNV---DALVGLLRAVREAGGRPYLGTFPSETRPETVTRD 241

Query: 121 NFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                +    NR +S G+QS  E+ L    R+H+ +    A   A  +  +   D+I  L
Sbjct: 242 VLGAIKPFVANRRLSFGLQSGSERLLASTKRDHDVAVVEEATATAVKMGFKPVVDVIAGL 301

Query: 180 PKQTMTQWEME---LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL- 235
           P +           ++R +S    H+ L+      GT  +         L  + +     
Sbjct: 302 PGEEEEDVVATVKAMERLVSMGA-HIRLHYFMPLPGTPLWGREPKPPHPLYWDFLKRHRK 360

Query: 236 ----YNLTQSITSAHGLHAYEI 253
               Y   Q   S   L  Y +
Sbjct: 361 RVEGYFEEQIRLSRAILETYRL 382


>gi|191168627|ref|ZP_03030409.1| radical SAM protein, TIGR01212 family [Escherichia coli B7A]
 gi|193065361|ref|ZP_03046432.1| radical SAM protein, TIGR01212 family [Escherichia coli E22]
 gi|194429115|ref|ZP_03061645.1| radical SAM protein, TIGR01212 family [Escherichia coli B171]
 gi|218555781|ref|YP_002388694.1| putative Fe-S oxidoreductase [Escherichia coli IAI1]
 gi|218696916|ref|YP_002404583.1| putative Fe-S oxidoreductase [Escherichia coli 55989]
 gi|256018870|ref|ZP_05432735.1| hypothetical protein ShiD9_08133 [Shigella sp. D9]
 gi|260846024|ref|YP_003223802.1| putative Fe-S oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|260857338|ref|YP_003231229.1| putative Fe-S oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|260869962|ref|YP_003236364.1| putative Fe-S oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|300817534|ref|ZP_07097750.1| radical SAM protein family [Escherichia coli MS 107-1]
 gi|300824366|ref|ZP_07104480.1| radical SAM protein family [Escherichia coli MS 119-7]
 gi|300904403|ref|ZP_07122251.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 84-1]
 gi|301304324|ref|ZP_07210438.1| radical SAM protein family [Escherichia coli MS 124-1]
 gi|307313084|ref|ZP_07592710.1| conserved hypothetical protein [Escherichia coli W]
 gi|309793790|ref|ZP_07688216.1| radical SAM protein family [Escherichia coli MS 145-7]
 gi|331670038|ref|ZP_08370883.1| radical SAM protein, family [Escherichia coli TA271]
 gi|332279958|ref|ZP_08392371.1| Fe-S oxidoreductase [Shigella sp. D9]
 gi|190901321|gb|EDV61088.1| radical SAM protein, TIGR01212 family [Escherichia coli B7A]
 gi|192927002|gb|EDV81625.1| radical SAM protein, TIGR01212 family [Escherichia coli E22]
 gi|194412840|gb|EDX29132.1| radical SAM protein, TIGR01212 family [Escherichia coli B171]
 gi|218353648|emb|CAU99868.1| putative Fe-S oxidoreductase [Escherichia coli 55989]
 gi|218362549|emb|CAR00173.1| putative Fe-S oxidoreductase [Escherichia coli IAI1]
 gi|257755987|dbj|BAI27489.1| predicted Fe-S oxidoreductase [Escherichia coli O26:H11 str. 11368]
 gi|257761171|dbj|BAI32668.1| predicted Fe-S oxidoreductase [Escherichia coli O103:H2 str. 12009]
 gi|257766318|dbj|BAI37813.1| predicted Fe-S oxidoreductase [Escherichia coli O111:H- str. 11128]
 gi|300403677|gb|EFJ87215.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 84-1]
 gi|300523095|gb|EFK44164.1| radical SAM protein family [Escherichia coli MS 119-7]
 gi|300529832|gb|EFK50894.1| radical SAM protein family [Escherichia coli MS 107-1]
 gi|300840450|gb|EFK68210.1| radical SAM protein family [Escherichia coli MS 124-1]
 gi|306906995|gb|EFN37503.1| conserved hypothetical protein [Escherichia coli W]
 gi|308122747|gb|EFO60009.1| radical SAM protein family [Escherichia coli MS 145-7]
 gi|315062517|gb|ADT76844.1| predicted Fe-S oxidoreductase [Escherichia coli W]
 gi|315257139|gb|EFU37107.1| radical SAM protein family [Escherichia coli MS 85-1]
 gi|320202125|gb|EFW76700.1| radical SAM protein, TIGR01212 family [Escherichia coli EC4100B]
 gi|323162903|gb|EFZ48738.1| radical SAM superfamily protein [Escherichia coli E128010]
 gi|323178613|gb|EFZ64189.1| radical SAM superfamily protein [Escherichia coli 1180]
 gi|323376895|gb|ADX49163.1| conserved hypothetical protein [Escherichia coli KO11]
 gi|324018337|gb|EGB87556.1| radical SAM protein, TIGR01212 family [Escherichia coli MS 117-3]
 gi|331062951|gb|EGI34865.1| radical SAM protein, family [Escherichia coli TA271]
 gi|332102310|gb|EGJ05656.1| Fe-S oxidoreductase [Shigella sp. D9]
          Length = 309

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|163783642|ref|ZP_02178631.1| hypothetical protein HG1285_08531 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881135|gb|EDP74650.1| hypothetical protein HG1285_08531 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 314

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 85/231 (36%), Gaps = 17/231 (7%)

Query: 26  PF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           PF C           C YC   S    +   +++  +     ++  R+  G R++  ++F
Sbjct: 27  PFTCPNIDGTKGRGGCIYCYRGSRP-EHLSPRQSLREQIEEGIRRARERYGRRTLFFVYF 85

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNR- 132
              T +  E + +  + D   +   V   V + +   P        +     R  G    
Sbjct: 86  QSYTNTYGELEELKELYDTATEYEEV---VGLDVGTRPDCATDEVLEMLSSYRDRGYEVW 142

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS   ++L+ + R H  S+ + A+  A+    ++    I  LP +    +    +
Sbjct: 143 IEFGLQSANFETLKRINRAHGISDLVDAVLRAKRHALKVCVHTIVGLPGEDRVDFLETAK 202

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +  V+ + ++ + + + T+  +++++G          V        + 
Sbjct: 203 LLTALNVEGVKIHPVYVMRNTVLARLYEEGRFKTLGLREYVSCAADMLELL 253


>gi|91212636|ref|YP_542622.1| hypothetical protein UTI89_C3647 [Escherichia coli UTI89]
 gi|91074210|gb|ABE09091.1| hypothetical protein UTI89_C3647 [Escherichia coli UTI89]
          Length = 288

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 24  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 78

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 79  MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 135

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 136 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 195

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 196 HIVKGSIMAKAWEAGRLN 213


>gi|213424401|ref|ZP_03357224.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
          Length = 218

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 12/190 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 36  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 87

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 88  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 147

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 148 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 207

Query: 208 TIEKGTLFYK 217
            I KG+   K
Sbjct: 208 HIVKGSTMAK 217


>gi|323173529|gb|EFZ59158.1| radical SAM superfamily protein [Escherichia coli LT-68]
          Length = 288

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 24  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 78

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 79  MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 135

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 136 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 195

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 196 HIVKGSIMAKAWEAGRLN 213


>gi|183598967|ref|ZP_02960460.1| hypothetical protein PROSTU_02411 [Providencia stuartii ATCC 25827]
 gi|188021183|gb|EDU59223.1| hypothetical protein PROSTU_02411 [Providencia stuartii ATCC 25827]
          Length = 300

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 12/200 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+ +S        +    QS   +++  +      S    +F   T +  E   +  
Sbjct: 45  CTFCNVSSF-----SDETQSTQSISEQIRHQKAKITRASRYLAYFQAYTSTYAEVCLLQQ 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + +   K   +   + + +   P  V  +      GYR+ G      LG+QS  +++L  
Sbjct: 100 LYEEALKQANI---IGLCVGTRPDCVPQDVLSLLSGYREHGYEIWLELGLQSAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H  +E    +  AR +  ++   LI  LP ++       L++ L    D + L+ L
Sbjct: 157 INRGHGFAEYQKTVTKARQLGLKVCTHLICGLPGESTLMNMQTLEKVLECGTDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            I +G++  K  + G L   
Sbjct: 217 HIVEGSIMAKSWRAGRLAPM 236


>gi|213616378|ref|ZP_03372204.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 290

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++LR 
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|323966391|gb|EGB61825.1| SAM protein [Escherichia coli M863]
 gi|327251302|gb|EGE62991.1| radical SAM superfamily protein [Escherichia coli STEC_7v]
          Length = 309

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSIMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|260793507|ref|XP_002591753.1| hypothetical protein BRAFLDRAFT_123517 [Branchiostoma floridae]
 gi|229276963|gb|EEN47764.1| hypothetical protein BRAFLDRAFT_123517 [Branchiostoma floridae]
          Length = 550

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 126/374 (33%), Gaps = 64/374 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 103 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 161

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWT-------------VSSNVE 107
           L            GGT   +        I  + D ++ + +              +  + 
Sbjct: 162 LGHSVDKVEFIVMGGTFMALGEDYRDYFIRNLHDALSGHTSNTVDEAVKYSEKSHTKCIG 221

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H++++ 
Sbjct: 222 ITIETRPDYCLKRHLSSMLSYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHMSKDA 281

Query: 168 FPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +      EL    ++  D + +Y   + +GT  Y++ K G  
Sbjct: 282 GFKVVCHMMPDLPNVGLERDIEQFIELFENPAFRPDGMKIYPTLVIRGTGLYELWKTGRY 341

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 342 KSYPPSTLV---DLIARILALVPPWTRIYRVQRDIPMPLVTSGVEHGNLRELALARMKDL 398

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 399 -----GTQCRDVRTREVGIQEIHHKVRPYEVELIRRDYVANGGWETFLSYEDPEQDILIG 453

Query: 334 GLRLREGISVKDWE 347
            LRLR+  S + + 
Sbjct: 454 LLRLRK-CSEETFR 466


>gi|194434507|ref|ZP_03066767.1| radical SAM protein, TIGR01212 family [Shigella dysenteriae 1012]
 gi|194417286|gb|EDX33395.1| radical SAM protein, TIGR01212 family [Shigella dysenteriae 1012]
 gi|332086379|gb|EGI91526.1| radical SAM superfamily protein [Shigella dysenteriae 155-74]
          Length = 309

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R HN +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHNFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|297795799|ref|XP_002865784.1| hypothetical protein ARALYDRAFT_495092 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311619|gb|EFH42043.1| hypothetical protein ARALYDRAFT_495092 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 565

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 126/368 (34%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 117 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 175

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +  +     I  + D ++ +              + +  + 
Sbjct: 176 LGHSVDKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIG 235

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 236 MTIETRPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 295

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 296 GFKVVAHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRY 355

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 356 RNYPPEQLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 411

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
           +G+      + +    R A   + H +     +++VR++  A    E FLS E    + L
Sbjct: 412 LGL------KCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDIL 465

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 466 VGLLRLRK 473


>gi|260773474|ref|ZP_05882390.1| hypothetical protein VIB_001944 [Vibrio metschnikovii CIP 69.14]
 gi|260612613|gb|EEX37816.1| hypothetical protein VIB_001944 [Vibrio metschnikovii CIP 69.14]
          Length = 313

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 89/243 (36%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S V  +   Q     S   +++         +    +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFVDEHTQKQ-----SIADQLKERAGEVQRANKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  +     ++  +   V + +   P  V     +        G      L
Sbjct: 88  TSTYAEVQVLKAMYQQALQSANI---VGLCVGTRPDCVPDAVLELLHDYVQQGFEVWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+     +    AR +  ++   LI  LPK+T +     LQ+ +
Sbjct: 145 GLQTANNSTLKRINRGHDFDCYQSIAQRARALGIKICTHLIVGLPKETASDNVATLQQVV 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I  G+   K  + G LV P+    V + +    +T    ++   +S+
Sbjct: 205 EVGTDGIKLHGLHIVDGSTMAKAWRAGKLVAPTLEEYVTIASHLIRLTPPEVVYH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|606150|gb|AAA58013.1| ORF_f309 [Escherichia coli str. K-12 substr. MG1655]
          Length = 309

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        + +  +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAHEHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|330447437|ref|ZP_08311086.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491628|dbj|GAA05583.1| radical SAM superfamily protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 312

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 84/231 (36%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+    V  +   +  ++     ++               +F   T +      +  
Sbjct: 45  CTFCN----VASFADEKTQYLP-IQQQLTDRAGEIHRAKRYLAYFQAYTSTY---AEVQT 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V         GY + G      LG+Q+  +++L+ 
Sbjct: 97  LKKMYEEALDTADIVGLCVGTRPDCVPDAVLELLSGYVEQGYEIWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +   A    AR +  ++   LI  LP  T       + + ++  VD + L+ L
Sbjct: 157 INRGHDFACYEAITQRARALGIKVCTHLIVGLPGDTKADNIDTINKVVAAGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   +  K   L   S     D+ +    +T A+ ++   +S  + 
Sbjct: 217 HIVEGSKMGQAFKAERLDPISLEDYTDIASEMIRLTPANVVYH-RVSAAAR 266


>gi|323154426|gb|EFZ40627.1| radical SAM superfamily protein [Escherichia coli EPECa14]
          Length = 288

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 24  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 78

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 79  MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 135

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 136 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 195

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 196 HIVKGSIMAKAWEAGRLN 213


>gi|238764255|ref|ZP_04625207.1| hypothetical protein ykris0001_25200 [Yersinia kristensenii ATCC
           33638]
 gi|238697536|gb|EEP90301.1| hypothetical protein ykris0001_25200 [Yersinia kristensenii ATCC
           33638]
          Length = 300

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 82/232 (35%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   Q    ++    +          +F   T +      +  
Sbjct: 45  CTFCNVASFA-----DEQMQQQGIAQQLAEQAKKANRAKRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +    Y + G      LG+Q+  +++L+ 
Sbjct: 97  LAAMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSTYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L++  +  VD + L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGENQAQCMETLEKVAASGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  + G L  L  E   +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSIMAKAWRAGRLPELALEEYVLTAGEMIRHTPADIVYHR--ISASAR 266


>gi|327539592|gb|EGF26201.1| coproporphyrinogen III oxidase [Rhodopirellula baltica WH47]
          Length = 227

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 77/224 (34%), Gaps = 15/224 (6%)

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +  +T   W+  ++R +  + + +++YQ+ +   T++        +  P  +       +
Sbjct: 1   MVGETWENWKDNIRRTIDMSPESVTIYQMELPFNTVYSADILGNKIESPVADWQTKRDWV 60

Query: 239 TQSITSAHGLHAYEISNHSFLGAESLHNLNY----WRYGDYIGIGPGAHSRVKVGSHRVA 294
           + +            S ++ +      N +Y    WR  D +  G  +        ++  
Sbjct: 61  SYAFDEMTSAGYKVSSAYTLVKDTGKVNFSYRDNLWRGADLLATGIASFGHAAGAHYQNL 120

Query: 295 ISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREG-ISVKDWEMLAGRN 353
                H E +L  +      +      +  Q     ++  L L+ G +  + ++     +
Sbjct: 121 P----HMEQYLGAIEGGELPLGRGFVPTEHQALIREMI--LLLKRGFLEREYFQSKFDVD 174

Query: 354 L---DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394
           +             +G  E +    ++ T+ G+  +DS++    
Sbjct: 175 IVENWKPVWDGYVEEGLAE-IHADEVKLTREGLLRVDSMLPAFF 217


>gi|222629083|gb|EEE61215.1| hypothetical protein OsJ_15240 [Oryza sativa Japonica Group]
          Length = 488

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 118/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 40  CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D                        + 
Sbjct: 99  LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVKCIG 158

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 159 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 218

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 219 GFKVVAHMMPDLPNVGVERDLESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 278

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 279 RNYPPELLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 334

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 335 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANEGWETFLSYEDTQQDILIGL 391

Query: 335 LRLRE 339
           LRLR+
Sbjct: 392 LRLRK 396


>gi|322787946|gb|EFZ13789.1| hypothetical protein SINV_05377 [Solenopsis invicta]
          Length = 454

 Score = 84.6 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 120/363 (33%), Gaps = 57/363 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSF------LTEMQWMRQL 65
           C         C YC      DF     S+              +         ++ ++QL
Sbjct: 91  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRIEQLKQL 150

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +        I  + D ++ +              + +  + I
Sbjct: 151 GHNVDKIEFIVMGGTFMSLPEDYRDYFIRNLHDALSGHTSSNVDEAVSYSERSTTKCIGI 210

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       +  LA++  
Sbjct: 211 TIETRPDYCLKKHLSDMLRYGCTRLEIGVQSIYEDVARDTNRGHTVRAVCESFELAKDAG 270

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +      E  ++ ++  D L +Y   + +GT  Y++ K G   
Sbjct: 271 FKVIAHMMPNLPNVDLERDITQFKEFFKSPAFRADGLKIYPTLVIRGTGLYELWKTGRYQ 330

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIGI 278
               +V VD      ++        Y +          S +   +L  L   R  D    
Sbjct: 331 SYPPSVLVDFIAHILALIPPWT-RVYRVQRDIPMPLVTSGVEHGNLRELALARMKDL--- 386

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
             G   R           I    + + ++++R++  +    E FL+ E    + L+  LR
Sbjct: 387 --GTECRDVRTREVGIQEIHHKVQPYEVELIRRDYTSNGAWETFLAYEDPQQDILIGLLR 444

Query: 337 LRE 339
           LR+
Sbjct: 445 LRK 447


>gi|146082450|ref|XP_001464514.1| histone acethyltransferase-like protein [Leishmania infantum JPCM5]
 gi|134068607|emb|CAM66903.1| histone acetyltransferase-like protein [Leishmania infantum JPCM5]
          Length = 759

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 104/293 (35%), Gaps = 35/293 (11%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++        R+ G  R+ LGVQ  ++  L  + R     +   AI L +
Sbjct: 312 IGVTLETRPDTINPEMLVELRRFGCTRVQLGVQHTDDGILTLVNRQSTREDTANAIKLLK 371

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  +    +      L       D   +Y       ++  + +KDG
Sbjct: 372 DSCFKVDIHLMPDLPGASPAVDKAMFDDVLDSPYLQADQWKIYPCQTTPFSVIEQWYKDG 431

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEIS----NHSFLGAESLHNLNYWRYGDYIGI 278
                     +D+    ++           I     ++   G E + NL        +  
Sbjct: 432 KYTPYGLENLIDVLLYAKARVHPWIRINRVIRDIPVDYVLAGVE-VANL-----RQLL-- 483

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE----------FLSSEQQAD 328
              AH +++    R      +  +   ++  K   A +++           FLS E   D
Sbjct: 484 ---AH-KLRERGGRCRCIRCREIKGDKEVTEKLKSATLQERRYEASEGTEVFLSVEMPTD 539

Query: 329 E-FLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV---QFSRLR 377
           +  ++  LRLR  +++++WE      L     R L   G +      +  RLR
Sbjct: 540 DATILGFLRLR--LNIRNWETPFAELLPCALIRELHVYGNLLPTYVEEAGRLR 590


>gi|5912566|emb|CAB56203.1| oxygen independent coproporphyrinogen III oxidase [Prochlorococcus
           marinus subsp. pastoris str. PCC 9511]
          Length = 165

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 20/161 (12%)

Query: 248 LHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWL-- 305
              YEISN+S  G +S HN  YW+   +   G G+ S    G +     I K  + W+  
Sbjct: 4   YSRYEISNYSIPGHQSRHNRVYWKGLGWWSFGQGSTSS-PWGENFTRPRISKDYKKWVTK 62

Query: 306 KMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD---------- 355
           +   K  H+++ +E +  E   DE +M+G+RL+EGI++  + +L  +N D          
Sbjct: 63  QCEIKLEHSLINQENIYKE--LDEKIMLGMRLKEGINI--YNLLNEQNWDNKKSKIALKK 118

Query: 356 -IECERNLQRQGFIERVQFSRLRCT-QRGMTMLDSVIANLA 394
            ++        G + + + +R   +  +GM + + ++ ++ 
Sbjct: 119 LLKAWEPFLESGLLIK-RGNRFFLSDPKGMELSNQILVSMF 158


>gi|324115185|gb|EGC09149.1| SAM protein [Escherichia fergusonii B253]
          Length = 320

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 56  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 111 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +  T+    L+R +   VD + L+ L
Sbjct: 168 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLERVVETGVDGIKLHPL 227

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 228 HIVKGSIMAKAWEAGRLN 245


>gi|237756136|ref|ZP_04584708.1| radical SAM protein, family [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691700|gb|EEP60736.1| radical SAM protein, family [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 307

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 75/222 (33%), Gaps = 18/222 (8%)

Query: 32  CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C+   F+ +    +  ++         M++ +           +F   T +    + 
Sbjct: 41  CTFCNNESFSPYAMTKQTVKDQ----IEKSMEFYKNKFKNTKGFLAYFQAFTNTYAPVEK 96

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQS 144
           +  + D       +   + ++I   P  V            + +    I  G+Q+   ++
Sbjct: 97  LREVYDQAMSYPEI---IGMSIGTRPDCVPEEVLDLIASYTIEKPEIWIEYGLQTAHYKT 153

Query: 145 LRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + R H  SE + A+    +    ++   +I  LP++         +   +  +D + 
Sbjct: 154 LKKINRAHGVSEFVDAVLRTKKRSSIKICVHVILGLPEEDYDDMMETAKLITALPIDGVK 213

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           ++ L I K T   K +  G++             L     S 
Sbjct: 214 IHPLHIVKHTAMEKQYHIGEIKELDMKEYAK---LAVDFLSY 252


>gi|218550494|ref|YP_002384285.1| Fe-S oxidoreductase [Escherichia fergusonii ATCC 35469]
 gi|218358035|emb|CAQ90681.1| putative Fe-S oxidoreductase [Escherichia fergusonii ATCC 35469]
          Length = 309

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 20/210 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +    +S   ++     L         +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SL 135
           T +  E Q +  +         +   V + +   P  V           +  G      L
Sbjct: 88  TSTFAEVQVLRSMYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  T+    L R +
Sbjct: 145 GLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLARVV 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              VD + L+ L I KG++  K  + G L 
Sbjct: 205 ETGVDGIKLHPLHIVKGSIMAKAWEAGRLN 234


>gi|288931241|ref|YP_003435301.1| histone acetyltransferase, ELP3 family [Ferroglobus placidus DSM
           10642]
 gi|288893489|gb|ADC65026.1| histone acetyltransferase, ELP3 family [Ferroglobus placidus DSM
           10642]
          Length = 524

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 3/151 (1%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  V +T E  P   +  +     + G  ++ LGVQS+ +  L  + R H   E + A  
Sbjct: 198 ARCVGMTFETRPDYSKEEHIIEMLRYGGTKVELGVQSVYDDVLEKINRGHGVREVVEATK 257

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEME---LQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           L R+   ++ + ++  LP  +  +       L +   +  D+L +Y   + +GT  Y+M+
Sbjct: 258 LLRDSAFKVGYHVMPGLPGSSFERDLKMFKILFQDEKFKPDYLKIYPTIVVRGTKLYEMY 317

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + G+    +    V+L    +     +    
Sbjct: 318 ERGEYEPYTTEEVVELIAKAKKYIPEYVRIQ 348


>gi|325282226|ref|YP_004254768.1| hypothetical protein Odosp_3643 [Odoribacter splanchnicus DSM
           20712]
 gi|324314035|gb|ADY34588.1| Conserved hypothetical protein CHP01212 [Odoribacter splanchnicus
           DSM 20712]
          Length = 315

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 19/200 (9%)

Query: 32  CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIE 85
           C +C+   FN        G    +     ++   R     + I      +F   + +   
Sbjct: 48  CTFCNNESFN-------PGYCRAVSGISRQIGEGRAFFARKYIGQKYLAYFQAYSNTYAP 100

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
            + +        +       V + I   P +V  +      G  +     +  GV+S  +
Sbjct: 101 LEELRQ---KYEEALDCPDVVGLVIATRPDAVTDDVLDYIAGLSRRCYVCVEYGVESAND 157

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + LR + R H  +EA  AI        R+   LI+ LP ++         R     +  L
Sbjct: 158 EVLRTVNRGHTFAEAEEAIRKTAERGIRIGAHLIFGLPGESRESMLEGAVRVCDLPIQVL 217

Query: 203 SLYQLTIEKGTLFYKMHKDG 222
            L+QL I +GT   + +   
Sbjct: 218 KLHQLQIVRGTAMAEQYLRH 237


>gi|303231484|ref|ZP_07318214.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513827|gb|EFL55839.1| radical SAM protein, TIGR01212 family [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 326

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 14/210 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +  ++ 
Sbjct: 48  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLPLEDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQS 144
              ++       +   V I I   P  +       ++           I LG+Q++   +
Sbjct: 105 KSYMEQGC----IDEAVGIAIATRPDCISNEYLDVFQDIQQQFQKDIYIELGLQTVNYHT 160

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   S  VD + L
Sbjct: 161 LDKINRGHDLAQFIDAVLRIKRYGFNVTTHMIVNLPWDTMEDTIEGAKILSSLGVDQVKL 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + L I K TL  K +++G + L S      
Sbjct: 221 HALYIVKNTLMAKWYEEGQITLISAEEYAK 250


>gi|87312223|ref|ZP_01094324.1| hypothetical protein DSM3645_04885 [Blastopirellula marina DSM
           3645]
 gi|87285048|gb|EAQ76981.1| hypothetical protein DSM3645_04885 [Blastopirellula marina DSM
           3645]
          Length = 341

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 70/220 (31%), Gaps = 7/220 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  S     +V            ++ ++         + +F   T +    + +  
Sbjct: 76  CTFCDNRSFSPSRRVPIRKITDQIDDGIRRLKIRYKVERFIA-YFQPATNTYAPVERLRP 134

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +    +  V   V + I   P  V     +      +     +  G+Q++  +SL ++
Sbjct: 135 LYEQAVSHEKV---VGMAIGTRPDCVPPPVMDLLAEMAERTYLTVEYGLQTIHNRSLDWM 191

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+      A+  ++     +   ++  LP ++        Q      +  + ++ L 
Sbjct: 192 NRGHHVDAFYDAVERSQGRGFEICAHVMLGLPGESHADMMATAQAIAQSPIQSVKIHNLY 251

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             K T        G++ L   +           +   H L
Sbjct: 252 CVKKTPLADQVAAGEVRLMELDEYASTLVDFLELLPPHML 291


>gi|312136913|ref|YP_004004250.1| histone acetyltransferase, elp3 family [Methanothermus fervidus DSM
           2088]
 gi|311224632|gb|ADP77488.1| histone acetyltransferase, ELP3 family [Methanothermus fervidus DSM
           2088]
          Length = 531

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 120/356 (33%), Gaps = 48/356 (13%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTE-----------MQWMRQLTGP-RSISSI 74
           C   KC YC  ++       G+E                    +  ++ +  P   +  I
Sbjct: 86  CPHGKCLYCPQSTKAPPSYTGEEPAALRARRHKYDPYRQVKDRLDQLKSIGHPIDKVELI 145

Query: 75  FFGGGTPS---LIEPQNIALILDGIAKNWTVSSNVEIT--------------------IE 111
             GG  P+     +   ++  L  + +  +     E                      +E
Sbjct: 146 IMGGTFPAHDLCYQEWFVSRCLQAMNEFGSKKEKKEFQYLEDIQKINEKSKVRCVGMTVE 205

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P   +  +       GV R+ LGVQ++       + R H+  + I A  + R+   ++
Sbjct: 206 TRPDYSKEEDVDRMLSFGVTRVELGVQTIYNYIYHRVKRGHDIKDVIEANRILRDSGLKV 265

Query: 172 SFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
              ++  L             L    S+  D L +Y   + K +  Y++ K G+    + 
Sbjct: 266 GMHIMPGLFADEEKDLRIFKRLFSDPSFRPDMLKIYPCLVTKESELYELWKRGEYRPYNT 325

Query: 230 NVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLN---YWRYGDYIGIGPGAH 283
             AV+L    + +            +I +   +      NL    Y +  +  G+     
Sbjct: 326 EEAVELIVKIKKLLPKWVRTMRIQRDIPSPLIVDGVKKSNLGELVYRKLKEE-GVRCKCI 384

Query: 284 SRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLR 338
              ++G       + +  E  +K+ ++   A   KE F+S E + ++ L+  LRLR
Sbjct: 385 RCREIGHRMKEGVMPE--EDNIKIFKEEYKAADGKEIFISHEDKENDVLVGFLRLR 438


>gi|218701980|ref|YP_002409609.1| putative Fe-S oxidoreductase [Escherichia coli IAI39]
 gi|218371966|emb|CAR19822.1| putative Fe-S oxidoreductase [Escherichia coli IAI39]
          Length = 309

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRMTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|48478418|ref|YP_024124.1| radical SAM superfamily protein [Picrophilus torridus DSM 9790]
 gi|48431066|gb|AAT43931.1| radical SAM Superfamily protein [Picrophilus torridus DSM 9790]
          Length = 531

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 86/253 (33%), Gaps = 34/253 (13%)

Query: 28  CVK-KCPYC----DFNS---HVRRYKVGQENFIQSF------LTEMQWMRQLTGPRSISS 73
           C   KC +C    D NS   +             S+         ++ +  +    S   
Sbjct: 96  CPHGKCIFCPGGVDTNSPQSYTGFEPSALRGRYNSYDSYNITFNRLKQLETIGHDTSKVD 155

Query: 74  IFFGGGTPSLIEPQNIALILDGI--AKNWTVSSNVE---------------ITIEANPSS 116
           +   GGT +   P      + G     N  VS ++E               +T+E  P  
Sbjct: 156 LIIMGGTFTARSPDYQRAFVKGCLDGMNKYVSGSLEESMLMNESSQRRCIGLTVETKPDW 215

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
               +     + G  ++ LGVQ L ++ L    R H  +E I +  LAR+   ++ + ++
Sbjct: 216 FMEGDIDLALEYGTTKVELGVQILNDRILNINNRGHGLAEIIRSTRLARDAGLKIVYHIM 275

Query: 177 YALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +   + +              Y  D L +Y   + +GT  YK+ K G  V      AV
Sbjct: 276 PGMYGSSYSDDVKSFDEMFSNSDYMPDMLKIYPTLVVRGTSLYKLWKSGKYVPYDTERAV 335

Query: 234 DLYNLTQSITSAH 246
           +L     +     
Sbjct: 336 NLITYFMARMPPW 348


>gi|332030167|gb|EGI69961.1| Elongator complex protein 3 [Acromyrmex echinatior]
          Length = 547

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 122/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEM------QWMRQL 65
           C         C YC      DF     S+              +   +      + ++QL
Sbjct: 99  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKQL 158

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +        I  + D ++ +              + +  + I
Sbjct: 159 GHNVDKIEFIVMGGTFMSLPDDYRDYFIRSLHDALSGHVSNNVDEAVSYSERSTTKCIGI 218

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + HLA++  
Sbjct: 219 TIETRPDYCLKKHLSDMLRYGCTRLEIGVQSIYEDVARDTNRGHTVHAVCESFHLAKDAG 278

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +      E  +  ++  D L +Y   + +GT  Y++ K G   
Sbjct: 279 FKVIAHMMPDLPNVDLERDIAQFKEFFKDPAFRADGLKIYPTLVIRGTGLYELWKTGRYK 338

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
             + +V V   +L   I +        Y +          S +   +L  L   R  D  
Sbjct: 339 SYAPSVLV---DLIARILALIPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALERMKDM- 394

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               G   R           I    + + ++++R++  A    E FLS E    + L+  
Sbjct: 395 ----GTDCRDVRTREVGIQEIHHKVQPYEVELIRRDYVANGGWETFLSYEDPLQDILIGL 450

Query: 335 LRLRE 339
           LRLR+
Sbjct: 451 LRLRK 455


>gi|326566585|gb|EGE16730.1| coproporphyrinogen III oxidase [Moraxella catarrhalis BC1]
          Length = 69

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 40/66 (60%)

Query: 10 NMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
          ++       L +Y+H P+CVKKCPYCDFNSH    +V  EN+I++ L++    + L   R
Sbjct: 4  DLLDPAHIPLSLYIHIPWCVKKCPYCDFNSHALPSQVPFENYIEALLSDAVSQQSLVSNR 63

Query: 70 SISSIF 75
           I ++F
Sbjct: 64 QIDTVF 69


>gi|311277817|ref|YP_003940048.1| hypothetical protein Entcl_0486 [Enterobacter cloacae SCF1]
 gi|308747012|gb|ADO46764.1| conserved hypothetical protein [Enterobacter cloacae SCF1]
          Length = 316

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 75/210 (35%), Gaps = 22/210 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +    +S   ++     L         +F   
Sbjct: 33  CPNRDGTLGRGGCTFCNVASFA-----DEAQQHRSIAEQLSHQAALVNRARRYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----IS 134
           T +  E Q +  +        ++   V + +   P  V             +R     + 
Sbjct: 88  TSTFAEVQVLRAMYQQAVSQVSI---VGLCVGTRPDCVPEAVLDLLSGYN-DRGYEVWLE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS ++++LR + R H+ +       LAR    ++   LI  LP +        L++ 
Sbjct: 144 LGLQSAQDKTLRRINRGHDFACYQKTTRLARERGLKVCTHLIVGLPGEGEQACLQTLEQV 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +   VD + L+ L I  G++  K  + G L
Sbjct: 204 VDTGVDGIKLHPLHIVTGSIMAKAWQAGRL 233


>gi|293336494|ref|NP_001169659.1| hypothetical protein LOC100383540 [Zea mays]
 gi|224030667|gb|ACN34409.1| unknown [Zea mays]
          Length = 571

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 121/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 123 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 181

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   +    + 
Sbjct: 182 LGHSVDKVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSANVEEAICYSEHSAVKCIG 241

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 242 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 301

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +      ++  D L +Y   + +GT  Y++ K G  
Sbjct: 302 GFKVVAHMMPDLPNVGVERDLESFREFFGSPAFRADGLKIYPTLVIRGTGLYELWKTGRY 361

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 362 RNYPPELLV---DIVARILSLVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 417

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 418 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANEGWETFLSYEDTRQDILIGL 474

Query: 335 LRLRE 339
           LRLR+
Sbjct: 475 LRLRK 479


>gi|161616339|ref|YP_001590304.1| hypothetical protein SPAB_04148 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552021|ref|ZP_02345774.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|194443195|ref|YP_002042587.1| hypothetical protein SNSL254_A3591 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|198245440|ref|YP_002217300.1| hypothetical protein SeD_A3689 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205354230|ref|YP_002228031.1| hypothetical protein SG3219 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858577|ref|YP_002245228.1| hypothetical protein SEN3162 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|161365703|gb|ABX69471.1| hypothetical protein SPAB_04148 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401858|gb|ACF62080.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|197939956|gb|ACH77289.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205274011|emb|CAR39017.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205323233|gb|EDZ11072.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|206710380|emb|CAR34738.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326625079|gb|EGE31424.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629352|gb|EGE35695.1| hypothetical protein SG9_3263 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 309

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++L  
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|317486580|ref|ZP_07945401.1| TIGR01212 family radical SAM protein [Bilophila wadsworthia 3_1_6]
 gi|316922180|gb|EFV43445.1| TIGR01212 family radical SAM protein [Bilophila wadsworthia 3_1_6]
          Length = 312

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 89/234 (38%), Gaps = 16/234 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C +C  N+      +G     + +     +   + +   S+   +   
Sbjct: 46  CPNRDGTLSRAGCTFC--NAIGSGSGLGLAGMNLPAQWEHWREHFRKSNRASLFLAYLQS 103

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLG 136
            + +      +A +L+       ++    +++   P  ++         A      + LG
Sbjct: 104 FSNTYGPASRLAAMLEIFRTLPDLAG---VSVGTRPDCLDPEKMAILGTAPWKEKWLELG 160

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           VQ+L + +LR + R H+A+ +  AI LA     ++   L+  LP +T       ++R  +
Sbjct: 161 VQTLNDATLRRINRGHDAAASAKAIELAEKTNVQVCAHLMLGLPGETPDDVHATVRRLNA 220

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             V  + L+ + + + T   + ++ G+ V  +E+  V+L     +      +  
Sbjct: 221 LPVHGVKLHNVYVCRNTALERAYRAGEYVPLTEDAYVELAVDALTELRPDIIIH 274


>gi|284161855|ref|YP_003400478.1| histone acetyltransferase, ELP3 family [Archaeoglobus profundus DSM
           5631]
 gi|284011852|gb|ADB57805.1| histone acetyltransferase, ELP3 family [Archaeoglobus profundus DSM
           5631]
          Length = 526

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 58/151 (38%), Gaps = 3/151 (1%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  + IT E  P      +     + G  ++ +GVQS+ +  L  + R H   + + A  
Sbjct: 196 ARCIGITFETRPDYAGEEHIIEMLRFGGTKVEIGVQSVYDDVLETIRRGHTVEDIVRATQ 255

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
           L ++   ++ + ++  LP     +     +       +  D+L +Y   + +GT  YK +
Sbjct: 256 LLKDSAFKVGYHVMPGLPNSNFERDLKMFRIIFEDERFKPDYLKIYPTLVVEGTELYKWY 315

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           K G     S    V+L  L +          
Sbjct: 316 KKGLYKPYSTEEVVELIALAKRRFPVWVRVQ 346


>gi|90580602|ref|ZP_01236407.1| putative Fe-S oxidoreductase [Vibrio angustum S14]
 gi|90438260|gb|EAS63446.1| putative Fe-S oxidoreductase [Photobacterium angustum S14]
          Length = 312

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 83/233 (35%), Gaps = 17/233 (7%)

Query: 32  CPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C +C+  S        +  +  +     E+   ++          +F   T +  E Q +
Sbjct: 45  CTFCNVASFADENTQFLPIQQQLAERADEIHRAKRYLA-------YFQAYTSTYAEVQTL 97

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSL 145
             + +   K   +   V + +   P  V     +        G      LG+Q+  E++L
Sbjct: 98  KKMYEEALKTTDI---VGLCVGTRPDCVPDAVLELLSDYVQQGYEIWLELGLQTANEKTL 154

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R H+ +   A    AR +  ++   LI  LP  T       + + ++  VD + L+
Sbjct: 155 KRINRGHDFACYAAITQRARALGIKVCTHLIVGLPGDTKADNIDTINKVVAAGVDGIKLH 214

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            L I +G+   +  K   L   S     ++ +      +   +  + +S  + 
Sbjct: 215 PLHIVEGSKMGQAFKAERLEPISLEEYTNIASEMI-RLTPADVIYHRVSASAR 266


>gi|242007698|ref|XP_002424664.1| elongator complex protein, putative [Pediculus humanus corporis]
 gi|212508157|gb|EEB11926.1| elongator complex protein, putative [Pediculus humanus corporis]
          Length = 532

 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 122/368 (33%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+     + ++Q
Sbjct: 85  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRANYNPYLQTRHRV-EQLQQ 143

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSNVE------------- 107
           L            GGT   +        I  + D +  +   SSNVE             
Sbjct: 144 LGHSVDKVEFIVMGGTFMSLPADYRDYFIRNLHDALTGHS--SSNVEEAVKHSERSKIKC 201

Query: 108 --ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
             ITIE  P      +       G  R+ +GVQS+ E   R   R H       + +LA+
Sbjct: 202 IGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFNLAK 261

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G
Sbjct: 262 DAGFKVVAHMMPDLPNVDLERDLEQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTG 321

Query: 223 DLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYG 273
                  N  V   +L   I +        Y +          S +   +L  L   R  
Sbjct: 322 RYKSYPPNTLV---DLIARILALIPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALLRMK 378

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFL 331
           D      G   R           I    + + +++VR++  A    E FLS E    + L
Sbjct: 379 DL-----GTQCRDVRTREVGIQEIHNKVKPYEVELVRRDYFANGGWETFLSYEDPEQDIL 433

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 434 VGLLRLRK 441


>gi|331664825|ref|ZP_08365730.1| radical SAM protein, family [Escherichia coli TA143]
 gi|331058073|gb|EGI30055.1| radical SAM protein, family [Escherichia coli TA143]
          Length = 309

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +  T+    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|288803301|ref|ZP_06408734.1| radical SAM protein [Prevotella melaninogenica D18]
 gi|288334121|gb|EFC72563.1| radical SAM protein [Prevotella melaninogenica D18]
          Length = 303

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 91/266 (34%), Gaps = 38/266 (14%)

Query: 32  CPYCD---FN-------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C YC+   FN         V +     + F      EM+++            +F   T 
Sbjct: 43  CFYCNNQTFNPAYCDNGKSVTQQLEDGKRFFSGKYPEMKYLA-----------YFQAYTN 91

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQ 138
           +     +I  + +   +   V   V + I   P  +  +    F+   +     +  GV+
Sbjct: 92  TYGTNDHIKKLYE---EALAVEDVVGLVIGTRPDCINDDLLDYFEELNRRTFLIVEYGVE 148

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +++LR + R H+ + A  AI        R+   +I  LP +   +   +     S  
Sbjct: 149 TCNDETLRLVNRGHDFACARKAIEETARRGIRVGAHIILGLPGEDAKESLRQAPIISSLP 208

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS---- 254
           +  L ++QL I +GT   KM+ +    L +    + L     S+     +    +S    
Sbjct: 209 LTTLKIHQLQIIRGTRLAKMYAEKPFHLYTVEEYIKLIADYISLLRPDLVLERFVSQSPP 268

Query: 255 ------NHSFLGAESLHNL-NYWRYG 273
                        E  H L NY +  
Sbjct: 269 DLLIAPKWGLKNYEFTHRLHNYMKEK 294


>gi|242212931|ref|XP_002472296.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728573|gb|EED82464.1| predicted protein [Postia placenta Mad-698-R]
          Length = 556

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 78/394 (19%), Positives = 137/394 (34%), Gaps = 68/394 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF+   + Y   +   +++              ++ ++ L
Sbjct: 100 CPHIAMTGNICVYCPGGPDSDFDYSTQSYTGYEPTSMRAIRARYDPYEQTRGRVEQLKSL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        IA + + ++       +             + I
Sbjct: 160 GHNVDKVEFIVMGGTFMSMPEDYRNKFIAQLHNALSGFTGFDVDEAVRYSEQSKSKAIGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + HLA++  
Sbjct: 220 TIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHLAKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 280 FKVVAHMMPDLPNVGVERDLEQFKEYFENPAFRSDGLKIYPTLVIRGTGLYELWRTGRYK 339

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAESLHNLNYW---RYGDYIG 277
             + NV VD+     ++        Y +     L     G E+  NL      R  D+  
Sbjct: 340 NYTPNVLVDVVARILALVPPWT-RVYRVQRDIPLPLVTSGCENSGNLRELALNRMKDF-- 396

Query: 278 IGPGAHSR----VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
              GA  R     +VG H +   +   PES ++++R++  A    E FLS E    + L+
Sbjct: 397 ---GAECRDVRFREVGIHEIHHKVR--PES-VELLRRDYAANGGWETFLSYEDPERDILI 450

Query: 333 MGLRLR----EGISVKDWEMLAGRNLDIECERNL 362
             LRLR    EG    +     G        R L
Sbjct: 451 GLLRLRKCSDEGTFRPELVKKEGEEGGCSIVREL 484


>gi|168262658|ref|ZP_02684631.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205348512|gb|EDZ35143.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 309

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++L  
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +  ++    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQSECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 266


>gi|332752372|gb|EGJ82762.1| radical SAM superfamily protein [Shigella flexneri 4343-70]
 gi|333000388|gb|EGK19971.1| radical SAM superfamily protein [Shigella flexneri K-218]
          Length = 309

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +  +VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETSVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  +   L 
Sbjct: 217 HIVKGSIMAKAWEAVRLN 234


>gi|283852454|ref|ZP_06369723.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
 gi|283572192|gb|EFC20183.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
          Length = 364

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 63/193 (32%), Gaps = 2/193 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       R        + +    ++   +    R    + F GG  + +   
Sbjct: 47  CPGRCLFCAQPLQTGRPPRPLSRTLDAMSAGLEAAGR--AGRGPYELAFYGGVFTGLPEP 104

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                L    +         +     P + +         AG++ + LG Q+ ++  L  
Sbjct: 105 WPERFLAEAIRLRERGLVTRVRCSTRPDACDPARLARLAAAGLSLVELGAQTFDDGVLAA 164

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            GR H+A+    A    R     +   L+  LP  T   +  +     +   + + LY  
Sbjct: 165 SGRGHDAAATRRAARAVRAAGLSLGLQLLPGLPGHTPAAFARDAAETAALGPEIVRLYPC 224

Query: 208 TIEKGTLFYKMHK 220
            +  GT    +++
Sbjct: 225 LVVAGTPLAALYR 237


>gi|163783923|ref|ZP_02178895.1| hypothetical protein HG1285_11622 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880808|gb|EDP74340.1| hypothetical protein HG1285_11622 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 303

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 75/229 (32%), Gaps = 17/229 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+ N     Y + +E         + + ++          +F   
Sbjct: 27  CPNRDGSKASGGCTFCN-NISFSPYAMTRETVENQINDAISFYKKRFKNIKGFLAYFQAY 85

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +      +  I D   +       + ++I   P  V            V +    I  
Sbjct: 86  TNTYAPVHKLREIYDKAMEY---DEIIGMSIGTRPDVVPEEVLDLISTYAVKKPEVWIEY 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G+Q+    +LR + R H  ++ + A+    +    ++   +I  LP  T   +    +  
Sbjct: 143 GLQTANINTLRSINRAHGVADFVDAVLRTKKRPNIKVCAHMIVGLPGDTYEDYVETAKLF 202

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            S  +D + ++ L I + T+  K +  G++          +      I 
Sbjct: 203 ASLPIDGVKIHPLHIVRHTVMEKQYAKGEIKTLDLEEYAQIVADIIEIL 251


>gi|78778066|ref|YP_394381.1| hypothetical protein Suden_1872 [Sulfurimonas denitrificans DSM
           1251]
 gi|78498606|gb|ABB45146.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM
           1251]
          Length = 319

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 82/234 (35%), Gaps = 26/234 (11%)

Query: 32  CPYC----------------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C +C                 F    NS +      Q   ++     +   ++       
Sbjct: 43  CTFCENDSFSASTNETQELKGFHLNLNSQINPNLDKQLLQLEMQFNAISKRQRDEYGAKK 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             ++F   T +      +  + +   K  +  + V ++I     S+     +   +    
Sbjct: 103 FLVYFQSFTNTYAPLSTLKALYE---KALSFDNVVGLSIGTRSDSITDETLEYIAQLNKE 159

Query: 132 R---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           +   I  G+QS+ +++L+ + R H+++     I  A+     +   LI+ LP +T     
Sbjct: 160 KEIWIEFGIQSVYDETLKKINRGHDSANVKEWILKAKKSGLHVCGHLIFGLPDETQEMML 219

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              + A  + +D +  + L + K T        GD +  +E + +D      ++
Sbjct: 220 HTAKEAYLWGIDSVKYHPLYVVKKTALANDFTKGDFLPINEELYLDTLTKAINM 273


>gi|283781407|ref|YP_003372162.1| hypothetical protein Psta_3641 [Pirellula staleyi DSM 6068]
 gi|283439860|gb|ADB18302.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
          Length = 327

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 8/233 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  S     +V + + ++     +  ++     R +   F     P+      ++ 
Sbjct: 59  CTFCDNRSFSPSRRVRRRDVLEQINDGISRLK----MRYVCDQFIAYFQPATNTYGEVSK 114

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +     +       V + I   P +V  +      + G      +  G+Q++ ++SL ++
Sbjct: 115 LRALYERALEHPQVVGMAIGTRPDAVPDDVLDLLTEIGQRTYLSVEYGMQTMHDRSLDWM 174

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    I AI  ++N    +   LI  LP ++        +      +D + ++ L 
Sbjct: 175 NRGHHHDAMIDAIARSQNRGFEICAHLILGLPGESHDDMVDSAKEVARLGLDAVKIHNLY 234

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
               T        G++ L   +  +        +     +    IS  +    
Sbjct: 235 AVHHTKLADQVAAGEVQLMGLDDYIQTLIDCLEVLPPSMIVE-RISGDAPPDY 286


>gi|320583643|gb|EFW97856.1| Subunit of Elongator complex [Pichia angusta DL-1]
          Length = 555

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 125/377 (33%), Gaps = 63/377 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 105 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIEQLKQ 163

Query: 65  LTGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVSSN-------------VE 107
           +            GGT   +        I  + + +        +             V 
Sbjct: 164 IGHSIDKVEYIIMGGTFMSLPKDYREDFIVQLHNALTGYNGTDIDEAIRFSQESETKCVG 223

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H           A++ 
Sbjct: 224 ITIETRPDYCTETHLDDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFCYAKDA 283

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++ K G  
Sbjct: 284 GYKVVSHMMPDLPNVGMERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYELWKKGLY 343

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
              + N+ +DL     ++        Y +          S +   +L  L   R  D   
Sbjct: 344 KSYNANMLIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVDNGNLRELALARMKD--- 399

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
            G    +  +    R A   E H +     ++++R++ +A    E FLS E    + L+ 
Sbjct: 400 FG----TTCRDVRTREAGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYEDPKQDILIG 455

Query: 334 GLRLREGISVKDWEMLA 350
            LRLR+      +    
Sbjct: 456 LLRLRKASKKYTYRKEF 472


>gi|18423134|ref|NP_568725.1| ELO3 (ELONGATA 3); histone acetyltransferase [Arabidopsis thaliana]
 gi|75305923|sp|Q93ZR1|ELP3_ARATH RecName: Full=Elongator complex protein 3; AltName: Full=Elongator
           component 3; AltName: Full=Protein ELONGATA 3
 gi|15810569|gb|AAL07172.1| putative histone acetyltransferase [Arabidopsis thaliana]
 gi|66841024|emb|CAI79647.1| elongator component [Arabidopsis thaliana]
 gi|332008542|gb|AED95925.1| Elongator complex protein 3 [Arabidopsis thaliana]
          Length = 565

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 126/368 (34%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 117 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 175

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +  +     I  + D ++ +              + +  + 
Sbjct: 176 LGHSVDKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIG 235

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 236 MTIETRPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 295

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 296 GFKVVAHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRY 355

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 356 RNYPPEQLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 411

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
           +G+      + +    R A   + H +     +++VR++  A    E FLS E    + L
Sbjct: 412 LGL------KCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDIL 465

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 466 VGLLRLRK 473


>gi|30064548|ref|NP_838719.1| hypothetical protein S3469 [Shigella flexneri 2a str. 2457T]
 gi|56480288|ref|NP_709009.2| hypothetical protein SF3251 [Shigella flexneri 2a str. 301]
 gi|30042807|gb|AAP18530.1| hypothetical protein S3469 [Shigella flexneri 2a str. 2457T]
 gi|56383839|gb|AAN44716.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|281602593|gb|ADA75577.1| putative Fe-S oxidoreductase [Shigella flexneri 2002017]
 gi|313648545|gb|EFS12987.1| radical SAM superfamily protein [Shigella flexneri 2a str. 2457T]
 gi|332752898|gb|EGJ83283.1| radical SAM superfamily protein [Shigella flexneri K-671]
 gi|332754303|gb|EGJ84669.1| radical SAM superfamily protein [Shigella flexneri 2747-71]
 gi|332765210|gb|EGJ95437.1| radical SAM superfamily protein [Shigella flexneri 2930-71]
 gi|332998334|gb|EGK17933.1| radical SAM superfamily protein [Shigella flexneri VA-6]
 gi|333014621|gb|EGK33968.1| radical SAM superfamily protein [Shigella flexneri K-304]
          Length = 309

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +  +VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETSVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|149190329|ref|ZP_01868602.1| hypothetical protein VSAK1_13987 [Vibrio shilonii AK1]
 gi|148835818|gb|EDL52782.1| hypothetical protein VSAK1_13987 [Vibrio shilonii AK1]
          Length = 312

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 87/231 (37%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E  IQS   ++               +F   T +      + +
Sbjct: 45  CTFCNVASFAS-----EETQIQSIHEQLTDRAGEVKRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + +   +    +  V + +   P  V         GY + G      LG+Q+  + +L+ 
Sbjct: 97  LKNMYEEALKYADIVGLCVGTRPDCVPESVLELLAGYVEQGYEIWLELGLQTAHDHTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR +  ++   LI  LP ++     + L + L+   D + L+ L
Sbjct: 157 INRGHDFAVYDEITRRARALGIKVCTHLIVGLPNESKQDNLVTLDKVLATGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  P+    +D+ +     T A  +    +S+ + 
Sbjct: 217 HIVEGSTMAKAWRAGRLEAPTLEFYLDVASEMIRRTPAEIIFH-RVSSSAR 266


>gi|27364014|ref|NP_759542.1| hypothetical protein VV1_0552 [Vibrio vulnificus CMCP6]
 gi|27360131|gb|AAO09069.1| hypothetical protein VV1_0552 [Vibrio vulnificus CMCP6]
          Length = 318

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  ++S   ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEQAQVKSIREQLTERAGEVHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V              G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L++ +
Sbjct: 145 GLQTASNSTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFATLEKVI 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  + G L  P     V++       T    +    +S+
Sbjct: 205 EVGADGIKLHGLHIVEGSTMAKAWRAGKLDAPELEQYVEIACEMIRRTPPEVIFH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|325498792|gb|EGC96651.1| Fe-S oxidoreductase [Escherichia fergusonii ECD227]
          Length = 309

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 72/210 (34%), Gaps = 20/210 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +     S   ++     L         +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEAQQHHSIAEQLAHQANLVNRAKRYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SL 135
           T +  E Q +  +         +   V + +   P  V           +  G      L
Sbjct: 88  TSTFAEVQVLRSMYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L  + R H+ +       LAR    ++   LI  LP +  T+    L R +
Sbjct: 145 GLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQTECLQTLARVV 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              VD + L+ L I KG++  K  + G L 
Sbjct: 205 ETGVDGIKLHPLHIVKGSIMAKAWEAGRLN 234


>gi|124088812|ref|XP_001347245.1| Histone acetyltransferase [Paramecium tetraurelia strain d4-2]
 gi|145473991|ref|XP_001423018.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057634|emb|CAH03619.1| Histone acetyltransferase, putative [Paramecium tetraurelia]
 gi|124390078|emb|CAK55620.1| unnamed protein product [Paramecium tetraurelia]
          Length = 551

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 84/249 (33%), Gaps = 50/249 (20%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     +IQ+    +  ++Q
Sbjct: 102 CPHIAVTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQA-RDRIAQLKQ 160

Query: 65  LTGPR-SISSIFFGGGTPSLIEPQN------IALILDGIAKNWT-------------VSS 104
           L      +  I  GG   + +          I  + D ++ + +              S 
Sbjct: 161 LGHDCDKVEYIIMGG---TFMSLDQEYRDYFIRNLHDALSGHRSQTVKESVQFSEESRSK 217

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            + ITIE  P   + ++       G  RI +GVQS+ E   R   R H          ++
Sbjct: 218 CIGITIETRPDFCQKSHLSDMLLYGCTRIEVGVQSIYEDIARDTNRGHTVESVKKCFAMS 277

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K+
Sbjct: 278 KDSGYKVVTHMMPDLPNMGVERDLESFKEFFENPDFRPDGLKIYPTLVIRGTGLYELWKN 337

Query: 222 GDLVLPSEN 230
           G       +
Sbjct: 338 GQYRNYPPD 346


>gi|331659498|ref|ZP_08360440.1| radical SAM protein, family [Escherichia coli TA206]
 gi|315297923|gb|EFU57193.1| radical SAM protein family [Escherichia coli MS 16-3]
 gi|331054080|gb|EGI26109.1| radical SAM protein, family [Escherichia coli TA206]
          Length = 309

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+   ++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHNKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARERGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|255540377|ref|XP_002511253.1| Elongator complex protein, putative [Ricinus communis]
 gi|223550368|gb|EEF51855.1| Elongator complex protein, putative [Ricinus communis]
          Length = 563

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 123/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +    +++Q+  + +  +++
Sbjct: 115 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNSYVQA-RSRIDQLKR 173

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +                   + 
Sbjct: 174 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGAVKCIG 233

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 234 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 293

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 294 GFKVVAHMMPDLPNVGVERDMESFREFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRY 353

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I +        Y +          S +   +L  L   R  D 
Sbjct: 354 RNYPPEQLV---DIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 409

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I   PE  +++VR++  A    E FLS E    + L+  
Sbjct: 410 LGLKCRDVRTREAGIQDIHHKIR--PEE-VELVRRDYTANEGWETFLSYEDTRQDILVGL 466

Query: 335 LRLRE 339
           LRLR+
Sbjct: 467 LRLRK 471


>gi|261342664|ref|ZP_05970522.1| radical SAM protein [Enterobacter cancerogenus ATCC 35316]
 gi|288315313|gb|EFC54251.1| radical SAM protein [Enterobacter cancerogenus ATCC 35316]
          Length = 327

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 84/244 (34%), Gaps = 23/244 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +    +S   ++               +F   
Sbjct: 47  CPNRDGTIGRGGCTFCNVASFA-----DEAQQHKSIAEQLAHQASRVNRAKQYLAYFQAY 101

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E Q +  +         +   V + +   P  V     +    Y++ G      L
Sbjct: 102 TSTWAEVQVLRGMYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLSEYKEQGYEIWLEL 158

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L  + R H+ +       LAR    ++   LI  LP +        L++ +
Sbjct: 159 GLQTAHDKTLHRINRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQQHGLETLEKVV 218

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              VD + L+ L I KG++  K  + G L  L  E+  V    + +        H   IS
Sbjct: 219 ETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGLELEDYTVTAGEMIRHTPPEIVYHR--IS 276

Query: 255 NHSF 258
             + 
Sbjct: 277 ASAR 280


>gi|226941876|ref|YP_002796950.1| YhcC [Laribacter hongkongensis HLHK9]
 gi|226716803|gb|ACO75941.1| YhcC [Laribacter hongkongensis HLHK9]
          Length = 325

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 80/243 (32%), Gaps = 23/243 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  +  R   +           ++Q  +           +F   
Sbjct: 33  CPNRDGTLGRGGCTFCNVRAFSRTADIP-------LAEQLQQAKTGADRARKYLAYFQAY 85

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E   +  + +    +  V   V + +   P  V     +   GYR  G      L
Sbjct: 86  TNTYAEVATLRGLYEAALTSADV---VGLCVGTRPDCVPDAVLDLLAGYRDQGYEVWLEL 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS   ++L  + R H  +    A+  AR     +   LI  LP ++  Q    L R +
Sbjct: 143 GLQSACNETLARINRGHGWAAYADAVRRARLRGLAVCTHLIVGLPGESPAQPLDTLARVV 202

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              V+ L L+ L I +G+      + G+L          +       T    +    +S 
Sbjct: 203 DAGVEGLKLHPLHIVRGSRMAAQFRRGELAPVGLEEYAGIACELIRHTPPAVVFH-RVSA 261

Query: 256 HSF 258
            + 
Sbjct: 262 TAK 264


>gi|110807076|ref|YP_690596.1| hypothetical protein SFV_3241 [Shigella flexneri 5 str. 8401]
 gi|110616624|gb|ABF05291.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 301

 Score = 83.8 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 37  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 91

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 92  MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 148

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +  +VD + L+ L
Sbjct: 149 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETSVDGIKLHPL 208

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 209 HIVKGSIMAKAWEAGRLN 226


>gi|281420875|ref|ZP_06251874.1| radical SAM protein [Prevotella copri DSM 18205]
 gi|281405167|gb|EFB35847.1| radical SAM protein [Prevotella copri DSM 18205]
          Length = 299

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 74/216 (34%), Gaps = 7/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    Y   +++  +       +  +          +F   T +    + +  
Sbjct: 47  CTYCDNRTFNPSYCDRKKSITEQLEEGKAFFSRKYPDMK-YLAYFQAYTNTYARVEQLRQ 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           + +   +   V   V I I   P  V         +        +  G++S  +++L+ +
Sbjct: 106 MYE---EALEVEDVVGIVIGTRPDCVSDELLDYLEELNRRTFVLVEYGIESANDETLKRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +   +A+             +I  LP +   +   +     S  +D L ++Q+ 
Sbjct: 163 NRGHDFACCRSAVERTHARGILTGGHIIIGLPGEDAEESLRQAPLISSLPLDILKIHQMQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           I +GT   + + +    + +    +D+      +  
Sbjct: 223 IIRGTRLAQEYAEHPFHVYTVEEYIDVIVKYIRLLR 258


>gi|168238031|ref|ZP_02663089.1| radical SAM protein, TIGR01212 family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734099|ref|YP_002116279.1| radical SAM protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194709601|gb|ACF88822.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197289154|gb|EDY28523.1| radical SAM protein, TIGR01212 family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 309

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHHSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V     +    Y+  G      LG+Q+  +++L  
Sbjct: 97  LRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG+   K  + G L                  T    ++   IS  + 
Sbjct: 217 HIVKGSTMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEIIYH-RISASAR 266


>gi|145590387|ref|YP_001152389.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282155|gb|ABP49737.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 483

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 41/233 (17%)

Query: 28  CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           C  +C +C            D    +R  +   + ++Q+      ++     P  I ++ 
Sbjct: 26  CPGRCAFCPTSADAPKSYMPDSPVVLRAKRNRYDPYLQTAGRVKVYLENGHTPSKIEAVV 85

Query: 76  FGGGTPSLIE----PQNIALILDGIAKNWTVSSNVE---------------------ITI 110
            GG T S +        +A +   +      +   +                     + +
Sbjct: 86  MGG-TFSALPRSYREWFVANVYKALNDYPHWAPAADPAPDLEAEQLRNETASLRLVALAV 144

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P  V+        + GV R+ LGVQS+ +  L+ + R H  +E   A  L ++   +
Sbjct: 145 ETRPDYVDGAEADFLLRLGVTRMELGVQSIYDDVLQRVKRGHGVAEVARATALLKDSAYK 204

Query: 171 MSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHK 220
           + + L+  LP     +    ++   S   +  D + +Y   +  GT  Y   +
Sbjct: 205 VCYHLMPGLPGSDPDRDLEMVKEVFSDPRFVPDCVKIYPTYVVPGTELYDEWR 257


>gi|292657001|ref|YP_003536898.1| HAT (histone acetyltransferase) family protein [Haloferax volcanii
           DS2]
 gi|291371267|gb|ADE03494.1| Elp3 of HAT (histone acetyltransferase) family [Haloferax volcanii
           DS2]
          Length = 550

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 100/309 (32%), Gaps = 15/309 (4%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P       F    P  +E + I  ++     
Sbjct: 162 TMTARSHDYQEWFVKRALEAMNDYDLDKEPEPAEDRSFKP-DPEDVEFEYIEDVIAENET 220

Query: 99  NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
           N     N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    +I
Sbjct: 221 NDIR--NIGTTFETKPDWCDPEQIDRMLDLGATKVEVGVQTTYERINREMHRGHGVQASI 278

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLF 215
            A    R+   ++ F ++   P  T      + ++      +  D+L +Y   I + T+ 
Sbjct: 279 DANRRLRDSAFKVGFHMMPGQPGMTKEMCLEDFRQLFENSDWRPDYLKIYPTLIVRDTVT 338

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHNL--NYW 270
           Y M +  +    +   A D+      +    +       +I            NL     
Sbjct: 339 YDMWRRDEYEPLNNEEAADIVAEVMGMIPKYTRLQRVQRDIPADFIDAGVWKSNLRQLAA 398

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
           +  +  GI      R            +  PE     V     A   + F+S E   ++ 
Sbjct: 399 QRAEERGI----VQRDIRAREVGMNEADPDPERIELDVMTYEVAGGTEHFISFEDPVEDL 454

Query: 331 LMMGLRLRE 339
           L+   RLR 
Sbjct: 455 LVGFCRLRF 463


>gi|213586129|ref|ZP_03367955.1| coproporphyrinogen III oxidase [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-0664]
          Length = 99

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%)

Query: 5  SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
          +A+   +       L +YVH PFC K C +C  N  V R +   + ++ +   E++    
Sbjct: 39 AAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIRHRAP 98

Query: 65 L 65
          L
Sbjct: 99 L 99


>gi|323183165|gb|EFZ68563.1| radical SAM superfamily protein [Escherichia coli 1357]
          Length = 309

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V    ++    Y+  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPYAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +   +    L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|328852453|gb|EGG01599.1| hypothetical protein MELLADRAFT_45092 [Melampsora larici-populina
           98AG31]
          Length = 538

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 124/363 (34%), Gaps = 57/363 (15%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS    ++ +RQ
Sbjct: 88  CPHIAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQS-RGRVEQLRQ 146

Query: 65  LTGPRSISSIFFGGGTPSLIEP-------QNIALILDGI----------AKNWTVSSNVE 107
           L            GGT   +           +   L G                 +  ++
Sbjct: 147 LGHSVDKVEFIVMGGTFMSLPASYRDNFVAQLHNSLSGYTGTDLDEAVKYSELARTKCID 206

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H       +  +A++ 
Sbjct: 207 ITIETRPDYCLKPHLSSMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRATCESFQMAKDA 266

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       +  D L +Y L + +GT  Y++ + G  
Sbjct: 267 GFKVVSHMMPDLPNVGVERDIEQFKEYFENPAFRSDGLKIYPLLVIRGTGVYELWRTGRY 326

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES-------LHNLNYWRYGDYIG 277
              + N  VD+     ++        Y +     +   S       L  L   R  D+  
Sbjct: 327 KNYTPNALVDIVARILALVPPWTRI-YRVQRDIPMPLVSSGVENGNLRELALQRLKDFGA 385

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           +        +VG H +   +       +++VR++  A    E FLS E    + L+  LR
Sbjct: 386 V-CRDIRHREVGIHEIHHKVRPDE---VELVRRDYVANGGWETFLSYEDCEKDILIGLLR 441

Query: 337 LRE 339
           LR+
Sbjct: 442 LRK 444


>gi|307129092|ref|YP_003881108.1| putative Fe-S oxidoreductase [Dickeya dadantii 3937]
 gi|306526621|gb|ADM96551.1| predicted Fe-S oxidoreductase [Dickeya dadantii 3937]
          Length = 309

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 77/232 (33%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++               +F   T +      + +
Sbjct: 45  CTFCNVASFADEQMQQR-----SIAEQLAAQAGKVNRARRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  T +  V + +   P  V     +    Y   G      LG+QS  +++LR 
Sbjct: 97  LASMYRQALTQADMVGLCVGTRPDCVPDTVLDLLADYHAQGYEVWLELGLQSAHDRTLRR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP ++       L++ +   VD + L+ L
Sbjct: 157 INRGHDFACYRQTAQRARARGLKVCSHLIVGLPGESEEHCLSTLRQVVEAGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G++  K    G L  LP          + +        H   IS  + 
Sbjct: 217 HIVTGSVMAKAWGAGRLPELPLARYVSIAGEMIRHTPPEIVYHR--ISASAR 266


>gi|147919130|ref|YP_687137.1| histone acetyltransferase [uncultured methanogenic archaeon RC-I]
 gi|110622533|emb|CAJ37811.1| histone acetyltransferase [uncultured methanogenic archaeon RC-I]
          Length = 531

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 9/193 (4%)

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVN 120
            ++    R + ++   GG     EP     I +    N T S  NV +T E  P      
Sbjct: 164 YQEWFVRRCLEAMNDFGG-----EPHPTYFIEEAQKANETASIRNVAMTFETRPDWCREI 218

Query: 121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
           +       G  ++ LGVQS  +  L+ + R H+ ++++ A  + R+   ++ F ++  LP
Sbjct: 219 HVDRMLNMGGTKVELGVQSTYDFVLKRIERGHSVADSVEANRILRDSGFKIGFHMMPGLP 278

Query: 181 KQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
                +      EL     +  D+L +Y   + +GT  + M + G+    S + A  L  
Sbjct: 279 GSDFERDLRMFKELFEDSRFCPDYLKIYPTLVTEGTKLHDMWERGEYKPLSSDDAAVLIA 338

Query: 238 LTQSITSAHGLHA 250
             ++         
Sbjct: 339 QIKASLPPWVRLQ 351


>gi|302780793|ref|XP_002972171.1| hypothetical protein SELMODRAFT_412711 [Selaginella moellendorffii]
 gi|300160470|gb|EFJ27088.1| hypothetical protein SELMODRAFT_412711 [Selaginella moellendorffii]
          Length = 469

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 86/268 (32%), Gaps = 42/268 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   R +
Sbjct: 110 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQARGRVDQLRRL 169

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVEI 108
             I         GGT   +        I  + D ++ + + +               + +
Sbjct: 170 GHIVDKVECILMGGTFMSLPADYHDYFIRNLHDALSGHTSRNVEEAVRYSEHAAIKCIGL 229

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P   +  + +     G  R+ +GVQS  E   R   R H  +       LA++  
Sbjct: 230 TIETRPDYCQSPHLRQMLSYGCRRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAG 289

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++   P   M +      +     S+  D L +Y   + +GT  Y++ K G   
Sbjct: 290 FKVVAHMMPNFPNVDMERDMESFRDFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYK 349

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  V+L     S+   + +   E+
Sbjct: 350 NYPPEQLVNLVPRVLSLDIHNQIKPEEV 377


>gi|145544531|ref|XP_001457950.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425769|emb|CAK90553.1| unnamed protein product [Paramecium tetraurelia]
          Length = 546

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 84/249 (33%), Gaps = 50/249 (20%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     +IQ+    +  ++Q
Sbjct: 102 CPHIAVTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQA-RDRIAQLKQ 160

Query: 65  LTGPR-SISSIFFGGGTPSLIEPQN------IALILDGIAKNWT-------------VSS 104
           L      +  I  GG   + +          I  + D ++ + +              S 
Sbjct: 161 LGHDCDKVEYIIMGG---TFMSLDQEYRDYFIRNLHDALSGHRSQTVKESVQFSEESRSK 217

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            + ITIE  P   + ++       G  RI +GVQS+ E   R   R H          ++
Sbjct: 218 CIGITIETRPDFCQKSHLSDMLLYGCTRIEVGVQSIYEDIARDTNRGHTVESVKKCFAMS 277

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K+
Sbjct: 278 KDSGYKVVTHMMPDLPNMGVERDLESFKEFFENPDFRPDGLKIYPTLVIRGTGLYELWKN 337

Query: 222 GDLVLPSEN 230
           G       +
Sbjct: 338 GQYRNYPPD 346


>gi|255715527|ref|XP_002554045.1| KLTH0E13068p [Lachancea thermotolerans]
 gi|238935427|emb|CAR23608.1| KLTH0E13068p [Lachancea thermotolerans]
          Length = 555

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 125/376 (33%), Gaps = 61/376 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 106 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 164

Query: 65  LTGPRSISSIFFGGGTPSLIE----PQNIALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + +                   +++  V 
Sbjct: 165 LGHSIDKVEYIIMGGTFMSLPKDYREDFIVKLHNALSGFNGNDIDEAIQFSQQSLTKCVG 224

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQSL E   R   R H          +A++ 
Sbjct: 225 ITIETRPDYCTHTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVKSVAETFCVAKDA 284

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 285 GYKIVSHMMPDLPNVGMERDIEQFKEYFENPAFRTDGLKIYPTLVIRGTGLYELWKTGRY 344

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
              + N  VDL     ++        Y +          S +   +L  L   R  D   
Sbjct: 345 KSYNANALVDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVDNGNLRELALARMKD--- 400

Query: 278 IGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            G    +   V +  V I    H      ++++R++ +A    E FLS E    + L+  
Sbjct: 401 FG---TTCRDVRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYEDPKQDILIGL 457

Query: 335 LRLREGISVKDWEMLA 350
           LRLR+      +    
Sbjct: 458 LRLRKASKKYTYRKEF 473


>gi|238015222|gb|ACR38646.1| unknown [Zea mays]
          Length = 488

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 121/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 40  CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 98

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   +    + 
Sbjct: 99  LGHSVDKVEFILMGGTFMSLPAEYRDYFIRNLHDALSGHTSANVEEAICYSEHSAVKCIG 158

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 159 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 218

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +      ++  D L +Y   + +GT  Y++ K G  
Sbjct: 219 GFKVVAHMMPDLPNVGVERDLESFREFFGSPAFRADGLKIYPTLVIRGTGLYELWKTGRY 278

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                 + V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 279 RNYPPELLV---DIVARILSLVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMED- 334

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I       +++VR++  A    E FLS E    + L+  
Sbjct: 335 LGLKCRDVRTREAGIQDIHHKIRPDE---VELVRRDYAANEGWETFLSYEDTRQDILIGL 391

Query: 335 LRLRE 339
           LRLR+
Sbjct: 392 LRLRK 396


>gi|9758914|dbj|BAB09451.1| histone acetyltransferase [Arabidopsis thaliana]
 gi|15810049|gb|AAL06951.1| AT5g50320/MXI22_3 [Arabidopsis thaliana]
 gi|22137026|gb|AAM91358.1| At5g50320/MXI22_3 [Arabidopsis thaliana]
          Length = 559

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 126/368 (34%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 111 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 169

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +  +     I  + D ++ +              + +  + 
Sbjct: 170 LGHSVDKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIG 229

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 230 MTIETRPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 289

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 290 GFKVVAHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRY 349

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I S        Y +          S +   +L  L   R  D 
Sbjct: 350 RNYPPEQLV---DIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 405

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
           +G+      + +    R A   + H +     +++VR++  A    E FLS E    + L
Sbjct: 406 LGL------KCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDIL 459

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 460 VGLLRLRK 467


>gi|238756105|ref|ZP_04617426.1| hypothetical protein yruck0001_2600 [Yersinia ruckeri ATCC 29473]
 gi|238705644|gb|EEP98040.1| hypothetical protein yruck0001_2600 [Yersinia ruckeri ATCC 29473]
          Length = 299

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 82/232 (35%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     V  +   ++   ++   ++    +     +    +F   T +      I  
Sbjct: 45  CTFC----QVASF-ADEQMQQRTISEQLAAQAKKVNRANRYLAYFQAYTSTY---AEINA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  T +  V I +   P  V            + G      LG+Q+  +++L+ 
Sbjct: 97  LAAMYQQALTEADIVGICVGTRPDCVPDAVLDLLSSYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    LQ+     VD L L+ L
Sbjct: 157 INRGHDFASYQHTARRARARGLKVCCHLIVGLPGEDQAQGLQTLQQVADTGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  L  E+  V    + +   +    H   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPELALEDYVVTAGEMIRHTPTDIVYHR--ISASAR 266


>gi|147906160|ref|NP_001088974.1| elongator complex protein 3 [Xenopus laevis]
 gi|82179179|sp|Q5HZM6|ELP3_XENLA RecName: Full=Elongator complex protein 3
 gi|57033032|gb|AAH88956.1| LOC496354 protein [Xenopus laevis]
          Length = 549

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 78/425 (18%), Positives = 139/425 (32%), Gaps = 79/425 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+     + ++Q
Sbjct: 101 CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVE 107
           L            GGT   +        I  + D ++ + + S               V 
Sbjct: 160 LGHNVDKVEFIVMGGTFMALPEDYRDFFIRNLHDALSGHTSNSVSEAVRYSERSNTKCVG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + HL+++ 
Sbjct: 220 ITIETRPDYCLKRHLSDMLCYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLSKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + LY   + +GT  Y++ K G  
Sbjct: 280 GFKVVSHMMPDLPNMGLERDIEQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 RSYSPSTLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIG 451

Query: 334 GLRLRE------------GISVKDWEMLAG--RNLDIECERNLQRQGF--IERVQFSRLR 377
            LRLR+            G+S+     + G    +        Q QGF  +   +  R+ 
Sbjct: 452 LLRLRKCSEESFRPELKGGVSIVRELHVYGSVVPISSRDPSKFQHQGFGMLLMEEAERIA 511

Query: 378 CTQRG 382
             + G
Sbjct: 512 RDEHG 516


>gi|68478719|ref|XP_716628.1| hypothetical protein CaO19.7387 [Candida albicans SC5314]
 gi|46438300|gb|EAK97633.1| hypothetical protein CaO19.7387 [Candida albicans SC5314]
 gi|238881003|gb|EEQ44641.1| hypothetical protein CAWG_02915 [Candida albicans WO-1]
          Length = 547

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 119/375 (31%), Gaps = 59/375 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   R +
Sbjct: 98  CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQLRQL 157

Query: 72  SSIF------FGGGTPSLIEPQN----IALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +        I  + +         +   +E           I
Sbjct: 158 GHSIDKVEYIIMGGTFMSLPIDYRENFITQLHNALTGFNGNNIDEAIEFSQQSQTKCVGI 217

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++  
Sbjct: 218 TIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDAG 277

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++ K G   
Sbjct: 278 YKVVSHMMPDLPNVGMERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELWKQGLYK 337

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +DL     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 338 SYNANALIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 393

Query: 279 GPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           G    S   V +  V I    H      ++++R++ +A    E FLS E    + L+  L
Sbjct: 394 G---TSCRDVRTREVGIQEVHHKVVPDQVELIRRDYYANGGWETFLSYEDPKQDILIGLL 450

Query: 336 RLREGISVKDWEMLA 350
           RLR+      +    
Sbjct: 451 RLRKASKKYTYRKEF 465


>gi|302791431|ref|XP_002977482.1| hypothetical protein SELMODRAFT_268069 [Selaginella moellendorffii]
 gi|302791437|ref|XP_002977485.1| hypothetical protein SELMODRAFT_443492 [Selaginella moellendorffii]
 gi|300154852|gb|EFJ21486.1| hypothetical protein SELMODRAFT_268069 [Selaginella moellendorffii]
 gi|300154855|gb|EFJ21489.1| hypothetical protein SELMODRAFT_443492 [Selaginella moellendorffii]
          Length = 557

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 73/246 (29%), Gaps = 42/246 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   R +
Sbjct: 110 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQARGRVDQLRRL 169

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVEI 108
                       GGT   +        I  + D ++ + +                 + +
Sbjct: 170 GHSVDKVEYILMGGTFMSLPADYRDYFIRNLHDALSGHTSRDVEEAVRYSEHAAIKCIGL 229

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      + +     G  R+ +GVQS  E   R   R H          LA++  
Sbjct: 230 TIETRPDYCLSPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVGAVADCFCLAKDAG 289

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +     +       +  D L +Y   + +GT  Y++ K G   
Sbjct: 290 FKVVAHMMPNLPNVDMERDMESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYK 349

Query: 226 LPSENV 231
                 
Sbjct: 350 NYPPEQ 355


>gi|150399555|ref|YP_001323322.1| putative radical SAM protein [Methanococcus vannielii SB]
 gi|150012258|gb|ABR54710.1| conserved hypothetical radical SAM protein [Methanococcus vannielii
           SB]
          Length = 334

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 79/225 (35%), Gaps = 11/225 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQNI 89
           C +C      R   V   N   S   +++   Q    + IS   ++F  GT +     ++
Sbjct: 68  CIFC--PKMGRSISVEYCNIKYSLKEQIECQIQQNREKGISKFYVYFYPGTNTHGPLNHL 125

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQSL 145
             + D      +    + ++I   P  +E           ++     I LG+Q++ +++L
Sbjct: 126 KKLWD---YALSFEDVIGLSIGTRPDCLENEKLDILEHYVKQGYEIWIDLGIQTMHDETL 182

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            FL R H + +    +   +     +   +I  LP +         +      +D L +Y
Sbjct: 183 DFLNRKHTSKDVERVLTECKKRGILVCGHIILGLPNENWKMMMKTAKVLSDLKIDALKIY 242

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T    ++  G+     E   + L        S + +  
Sbjct: 243 PLVVIENTELELLYWKGEYKSLDEKQYIYLVTDFLEHLSKYVIIQ 287


>gi|298504385|gb|ADI83108.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter sulfurreducens KN400]
          Length = 626

 Score = 83.4 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 5/184 (2%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           CDF+        G+    +  L  +     +     +  +F    T +    Q+      
Sbjct: 192 CDFSCEYCFDDKGERGVRRYSLERIDAELDVIVRSGVPQVFVLDSTFN----QDRERAKK 247

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
            +      + +V    E     ++    + +     + + +G+QS + + LR + R+ + 
Sbjct: 248 VLKMIRARARHVHFHFEVRSEFIDREMAKLFAGITCS-LQIGLQSADPKILRRIRRHLDP 306

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +    I L         FDLIY LP  ++  +   L  AL    +HL ++ L I  GT+
Sbjct: 307 DDFRERIGLLNESGAIFGFDLIYGLPGDSLAAFRRSLDFALELYPNHLDIFPLAILPGTI 366

Query: 215 FYKM 218
               
Sbjct: 367 LANR 370


>gi|291223266|ref|XP_002731631.1| PREDICTED: elongation protein 3 homolog [Saccoglossus kowalevskii]
          Length = 549

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 135/408 (33%), Gaps = 77/408 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWT-------------VSSNVE 107
           +            GGT   +  +     I  + D ++ + +              +  + 
Sbjct: 160 IGHSVDKVEFIVMGGTFMCLGEEYRDYFIRNLHDALSGHTSNNVAEAVKYSEKSKTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H++++ 
Sbjct: 220 ITIETRPDYCLKKHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHMSKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D + +Y   + +GT  Y++ K G  
Sbjct: 280 GFKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGMKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                +  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSTLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I +  + + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTKCRDVRTREVGIQEIHQKVKPYEVELIRRDYVANGGWETFLSYEDPEQDILIG 451

Query: 334 GLRLRE------------GISVKDWEMLAG--RNLDIECERNLQRQGF 367
            LRLR+            G+S+     + G    +     R  Q QGF
Sbjct: 452 LLRLRKCSDQTFRPELKGGVSIVRELHVYGSVVPVSARDPRKFQHQGF 499


>gi|302780773|ref|XP_002972161.1| hypothetical protein SELMODRAFT_96899 [Selaginella moellendorffii]
 gi|300160460|gb|EFJ27078.1| hypothetical protein SELMODRAFT_96899 [Selaginella moellendorffii]
          Length = 557

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 73/246 (29%), Gaps = 42/246 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   R +
Sbjct: 110 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYIQARGRVDQLRRL 169

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVEI 108
                       GGT   +        I  + D ++ + +                 + +
Sbjct: 170 GHSVDKVEYILMGGTFMSLPADYRDYFIRNLHDALSGHTSRDVEEAVRYSEHAAIKCIGL 229

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      + +     G  R+ +GVQS  E   R   R H          LA++  
Sbjct: 230 TIETRPDYCLSPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVGAVADCFCLAKDAG 289

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +     +       +  D L +Y   + +GT  Y++ K G   
Sbjct: 290 FKVVAHMMPNLPNVDMERDMESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYK 349

Query: 226 LPSENV 231
                 
Sbjct: 350 NYPPEQ 355


>gi|225457433|ref|XP_002262701.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 563

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 123/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 115 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 173

Query: 65  LTGPRSISSIFFGGGTPSLIEPQ-------NIALILDG----------IAKNWTVSSNVE 107
           L            GGT   +  +       N+   L G               +    + 
Sbjct: 174 LGHSVDKVEFILMGGTFMSLPAEYRDYFTRNLHDALSGHTSANVEEAVAYSEHSAIKCIG 233

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 234 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 293

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 294 GFKVVAHMMPDLPNVGVERDLESFREFFESPMFRADGLKIYPTLVIRGTGLYELWKTGRY 353

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I +        Y +          S +   +L  L   R  D 
Sbjct: 354 RNYPPEQLV---DIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 409

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I+  PE  +++VR++  A    E FLS E    + L+  
Sbjct: 410 LGLKCRDVRTREAGIQDIHHKIK--PEE-VELVRRDYTANEGWETFLSYEDIRQDILVGL 466

Query: 335 LRLRE 339
           LRLR+
Sbjct: 467 LRLRK 471


>gi|84995686|ref|XP_952565.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65302726|emb|CAI74833.1| hypothetical protein, conserved [Theileria annulata]
          Length = 876

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 3/139 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +     +  RK G  R+ LG+Q   +  L ++ R H   ++I AI+L +
Sbjct: 413 IGLTLETRPDRINPTEIELLRKFGCTRVQLGIQHTNDSILEYVNRGHTTKDSIKAIYLLK 472

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++   ++  LP  +  +     +  L      VD   +Y   +   +   K HK G
Sbjct: 473 ENCFKVDIHIMPDLPSSSPEEDLEMFKYILSSKDLQVDQWKIYPCEVTPFSEIEKWHKQG 532

Query: 223 DLVLPSENVAVDLYNLTQS 241
             +   +  +  L NL   
Sbjct: 533 KYIPYFDVDSKLLTNLIIR 551


>gi|221482322|gb|EEE20677.1| Radical SAM domain-containing protein, putative [Toxoplasma gondii
           GT1]
          Length = 984

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 76/230 (33%), Gaps = 38/230 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----------SISSIF 75
           C   C YC +     R Y   +   +++       +RQ                 I  + 
Sbjct: 280 CPHNCHYCPNEPGQPRSYLSTEPAVLRANQNAWDAVRQFHDRASTLQGNGHTVDKIEVLV 339

Query: 76  FGG---GTPSLIEPQNIALILDG---------------IAKNWTVSSNVEITI-----EA 112
            GG   G PS  + + I  +                  + +  T + N E  I     E 
Sbjct: 340 LGGTWSGYPSDYQEEFIRDLFYAANVFNSPPPLRPKLPLEEEQTANENAECRIIGLTLET 399

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     +  R+ G  R+ LG+Q +E   L F+ R     +A+ AI L ++   ++ 
Sbjct: 400 RPDFINRFEIRKLRRFGCTRVQLGLQHVENDVLNFINRGCQRQDAVKAIRLLKDAGYKVD 459

Query: 173 FDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMH 219
             ++  LP  T+ +        L       D   LY   +   +   + +
Sbjct: 460 IHIMPDLPSSTVERDLRMFFYLLGSSDLQADQWKLYPCEVTPFSEIERWY 509


>gi|154334765|ref|XP_001563629.1| histone acethyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060651|emb|CAM37664.1| histone acetyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 760

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 54/140 (38%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++        R+ G  R+ LGVQ  +++ L  + R     + + AI L +
Sbjct: 312 IGVTLETRPDTINPAMLVELRRFGCTRVQLGVQHTDDRILTLVNRQSTREDTVNAIKLLK 371

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  + +  +      L       D   +Y       ++  + +KD 
Sbjct: 372 DSCFKVDIHLMPDLPGASSSIDKAMFDDVLDSPYLQADQWKIYPCQTTPFSVIEQWYKDR 431

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                     +D+    ++ 
Sbjct: 432 KYTPYGLENLIDVLLYAKAR 451


>gi|37678826|ref|NP_933435.1| Fe-S oxidoreductase [Vibrio vulnificus YJ016]
 gi|37197567|dbj|BAC93406.1| predicted Fe-S oxidoreductase [Vibrio vulnificus YJ016]
          Length = 330

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++  ++S   ++               +F   T +      + +
Sbjct: 57  CTFCNVASFA-----DEQAQVKSIREQLTERAGEVHRAKKYLAYFQAYTSTY---AEVQV 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           + +   +    +  V + +   P  V              G      LG+Q+    +L+ 
Sbjct: 109 LKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQTASNDTLKR 168

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+          AR +  ++   LI  LPK++       L++ +    D + L+ L
Sbjct: 169 INRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFTTLEKVIEVGTDGIKLHGL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  P     V++       T    +    +S+ + 
Sbjct: 229 HIVEGSTMAKAWRAGKLDAPELEQYVEIACEMIRRTPPEVIFH-RVSSAAR 278


>gi|262274947|ref|ZP_06052758.1| hypothetical protein VHA_001930 [Grimontia hollisae CIP 101886]
 gi|262221510|gb|EEY72824.1| hypothetical protein VHA_001930 [Grimontia hollisae CIP 101886]
          Length = 309

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 80/216 (37%), Gaps = 20/216 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+ +S        +     S  +++               +F   
Sbjct: 34  CPNRDGTLGRGGCTFCNVSSFA-----DESAQQLSVTSQLVQRASEVNRAKRYLAYFQAY 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +  E + + ++ +   K+  +   V + +   P  V         GY++ G      L
Sbjct: 89  TSTYAEVEKLRVMYEDALKHADI---VGLCVGTRPDCVPDAVLELLAGYQQQGYEIWLEL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +   A    AR +   +   LI  LP  T       ++R +
Sbjct: 146 GLQTANDKTLQRINRGHDFACYDAITRKARALGLNVCTHLIVGLPGDTKADHITTIERVI 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
               D + L+ L I +G++  K  + G L   S   
Sbjct: 206 ETGTDGIKLHPLHIVEGSVMAKAWRAGRLDAMSLEA 241


>gi|254572788|ref|XP_002493503.1| Subunit of Elongator complex, which is required for modification of
           wobble nucleosides in tRNA [Pichia pastoris GS115]
 gi|238033302|emb|CAY71324.1| Subunit of Elongator complex, which is required for modification of
           wobble nucleosides in tRNA [Pichia pastoris GS115]
 gi|328354672|emb|CCA41069.1| elongator complex protein 3 [Pichia pastoris CBS 7435]
          Length = 556

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 125/376 (33%), Gaps = 61/376 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +RQ
Sbjct: 105 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIEQLRQ 163

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWT-------------VSSNVE 107
           L            GGT   +        I  + + +                  ++  V 
Sbjct: 164 LGHSIDKVEYIIMGGTFMSLPVDYREGFITQLHNALTGYNGKDIDEAIKFSQQSLTKCVG 223

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H           +++ 
Sbjct: 224 ITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFGYSKDA 283

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++ K G  
Sbjct: 284 GYKVVSHMMPDLPNVGMERDLEQFKEYFESPAFRTDGLKLYPTLVIRGTGLYELWKTGRY 343

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIG 277
              + N  +DL     ++        Y +     +     G E  +L  L   R  D   
Sbjct: 344 RSYNANALIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD--- 399

Query: 278 IGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            G    S   V +  V I    H      ++++R++ +A    E FLS E    + L+  
Sbjct: 400 FG---TSCRDVRTREVGIQEVHHKVQPDQVELIRRDYYANGGWETFLSYEDPKQDILIGL 456

Query: 335 LRLREGISVKDWEMLA 350
           LRLR+      +    
Sbjct: 457 LRLRKCSKKYTFRKEF 472


>gi|307596567|ref|YP_003902884.1| histone acetyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307551768|gb|ADN51833.1| histone acetyltransferase, ELP3 family [Vulcanisaeta distributa DSM
           14429]
          Length = 507

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 44/263 (16%)

Query: 28  CVKKCPYC--------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C   C YC              D    +R   +  + + Q      Q+         +  
Sbjct: 32  CPFNCTYCPGGRKTNTPKSYLPDSPVVLRAAPLNYDPYKQVVARIRQYEALHHPVSKVEL 91

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTV---------SSNVEIT--------------- 109
           I  GG   SL E   +  + +                 + ++E                 
Sbjct: 92  IVMGGTVTSLPESYLMWFVGNAFKAINDYPLVNSGPVDNPDIEYEHRRNEKARIRVVALE 151

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +E  P      +     + G  R+ +GVQS+ +  LR + R H   E   A    ++   
Sbjct: 152 LETRPDFARPRHIDLMLRLGFTRVEIGVQSIYDDILRRVKRGHGVKEVTEATQYLKDAAY 211

Query: 170 RMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++ + ++  LP  T     +    +    S+  D + +Y   + K T  Y+        L
Sbjct: 212 KVCYHIMPGLPGSTPDRDLEMVKTIFDDPSFMPDCVKVYPTFVVKDTELYEEWLR---GL 268

Query: 227 PSENVAVDLYNLTQSITSAHGLH 249
                    + L  +I ++    
Sbjct: 269 YRSYDEETWHWLLANIMASIPRW 291


>gi|238796207|ref|ZP_04639717.1| hypothetical protein ymoll0001_34650 [Yersinia mollaretii ATCC
           43969]
 gi|238719900|gb|EEQ11706.1| hypothetical protein ymoll0001_34650 [Yersinia mollaretii ATCC
           43969]
          Length = 300

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 88/232 (37%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     V  +   ++   QS   ++    + T   +    +F   T +      +  
Sbjct: 45  CTFC----QVASF-ADEQMQQQSIAQQLAAQAKKTNRANRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAVMYQQALAETDIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +     +  AR    ++   LI  LP +   Q    L++ ++  VD L L+ L
Sbjct: 157 INRGHDFACYQQTVRRARARGLKVCCHLIVGLPGEDRAQGMETLEKVVATGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  L  ++  +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPELALKDYVLTAGEMIRHTPAEIVYHR--ISASAR 266


>gi|241953563|ref|XP_002419503.1| Elongator complex subunit, putative; RNA polymerase II Elongator
           subunit, putative; histone acetyltransferase, putative
           [Candida dubliniensis CD36]
 gi|223642843|emb|CAX43098.1| Elongator complex subunit, putative [Candida dubliniensis CD36]
          Length = 547

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 71/375 (18%), Positives = 118/375 (31%), Gaps = 59/375 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   R +
Sbjct: 98  CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQLRQL 157

Query: 72  SSIF------FGGGTPSLIEPQN----IALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +        I  + +         +   +E           I
Sbjct: 158 GHSIDKVEYIIMGGTFMSLPIDYRENFITQLHNALTGFNGNNIDEAIEFSQQSQTKCVGI 217

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P            K G  R+ +GVQS+ E   R   R H          +A++  
Sbjct: 218 TIETRPDYCTETQLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDAG 277

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++ K G   
Sbjct: 278 YKVVSHMMPDLPNVGMERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYELWKQGLYK 337

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +DL     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 338 SYNANALIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 393

Query: 279 GPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           G    S   V +  V I    H      ++++R++ +A    E FLS E    + L+  L
Sbjct: 394 G---TSCRDVRTREVGIQEVHHKVVPDQVELIRRDYYANGGWETFLSYEDPKQDILIGLL 450

Query: 336 RLREGISVKDWEMLA 350
           RLR+      +    
Sbjct: 451 RLRKASKKYTYRKEF 465


>gi|237842067|ref|XP_002370331.1| elongator complex protein 3, putative [Toxoplasma gondii ME49]
 gi|211967995|gb|EEB03191.1| elongator complex protein 3, putative [Toxoplasma gondii ME49]
 gi|221502781|gb|EEE28495.1| Radical SAM domain-containing protein, putative [Toxoplasma gondii
           VEG]
          Length = 999

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 76/230 (33%), Gaps = 38/230 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----------SISSIF 75
           C   C YC +     R Y   +   +++       +RQ                 I  + 
Sbjct: 295 CPHNCHYCPNEPGQPRSYLSTEPAVLRANQNAWDAVRQFHDRASTLQGNGHTVDKIEVLV 354

Query: 76  FGG---GTPSLIEPQNIALILDG---------------IAKNWTVSSNVEITI-----EA 112
            GG   G PS  + + I  +                  + +  T + N E  I     E 
Sbjct: 355 LGGTWSGYPSDYQEEFIRDLFYAANVFNSPPPLRPKLPLEEEQTANENAECRIIGLTLET 414

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     +  R+ G  R+ LG+Q +E   L F+ R     +A+ AI L ++   ++ 
Sbjct: 415 RPDFINRFEIRKLRRFGCTRVQLGLQHVENDVLNFINRGCQRQDAVKAIRLLKDAGYKVD 474

Query: 173 FDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMH 219
             ++  LP  T+ +        L       D   LY   +   +   + +
Sbjct: 475 IHIMPDLPSSTVERDLRMFFYLLGSSDLQADQWKLYPCEVTPFSEIERWY 524


>gi|313893266|ref|ZP_07826841.1| radical SAM protein, TIGR01212 family [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442162|gb|EFR60579.1| radical SAM protein, TIGR01212 family [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 321

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 16/211 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +   + 
Sbjct: 48  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLSLDDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQ 143
              ++       +   V I I   P  +             +R      I LG+Q++   
Sbjct: 105 KSYMEQGC----IDEAVGIAIATRPDCIADEYLDILADIR-DRFQKDIYIELGLQTVNYD 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   +  VD + 
Sbjct: 160 TLEKINRGHDLAQFIDAVLRIKRYGFNVTTHMIVNLPWDTMKDTIEGARILSALGVDQVK 219

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+ L I K TL  K +++G   L S     D
Sbjct: 220 LHALYIVKNTLMAKWYQEGQFTLISAEEYAD 250


>gi|270307973|ref|YP_003330031.1| radical SAM superfamily [Dehalococcoides sp. VS]
 gi|270153865|gb|ACZ61703.1| radical SAM superfamily [Dehalococcoides sp. VS]
          Length = 459

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 79/246 (32%), Gaps = 31/246 (12%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-----------GPRSISSIF 75
           C  KC YC  F++  + Y       +++   E Q  +Q+                +  I 
Sbjct: 23  CPGKCIYCPTFDATPQSYTPESPAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELIV 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTV----------------SSNVEITIEANPSSVEV 119
            GG   S         I D       +                   V + IE  P     
Sbjct: 83  MGGTFLSADTAYQYGFIKDCYDALNGIVAGSLEEAKTINETAQHRCVGLCIETRPDICGE 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              Q     G  R+ LGVQ L++   + + R H  ++   A  L R    ++ +  +  L
Sbjct: 143 TEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADVAEATRLLREYGLKVHYHWMPGL 202

Query: 180 PKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           P     +       +     +  D L LY   + +GT+  +  K+G       ++   L 
Sbjct: 203 PGSAPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTVLEEWWKEGRYTPYPSDIMTGLI 262

Query: 237 NLTQSI 242
              +++
Sbjct: 263 ADIKAL 268


>gi|39995383|ref|NP_951334.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39982145|gb|AAR33607.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
          Length = 589

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 5/184 (2%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           CDF+        G+    +  L  +     +     +  +F    T +    Q+      
Sbjct: 155 CDFSCEYCFDDKGERGVRRYSLERIDAELDVIVRSGVPQVFVLDSTFN----QDRERAKK 210

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
            +      + +V    E     ++    + +     + + +G+QS + + LR + R+ + 
Sbjct: 211 VLKMIRARARHVHFHFEVRSEFIDREMAKLFAGITCS-LQIGLQSADPKILRRIRRHLDP 269

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +    I L         FDLIY LP  ++  +   L  AL    +HL ++ L I  GT+
Sbjct: 270 DDFRERIGLLNESGAIFGFDLIYGLPGDSLAAFRRSLDFALELYPNHLDIFPLAILPGTI 329

Query: 215 FYKM 218
               
Sbjct: 330 LANR 333


>gi|260591624|ref|ZP_05857082.1| radical SAM protein, family [Prevotella veroralis F0319]
 gi|260536424|gb|EEX19041.1| radical SAM protein, family [Prevotella veroralis F0319]
          Length = 299

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 88/250 (35%), Gaps = 17/250 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   Q++  +      ++  +          +F   T +     ++  
Sbjct: 43  CIYCNNQTFNPTYCDKQKSVTEQLEDGKRFFARKYPDMK-YLAYFQAYTNTYGTNSHLKA 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +   +   V   V + I   P  +  +    F+   +     +  GV++  + +LR +
Sbjct: 102 LYE---EALAVEDVVGLVIGTRPDCINDDLLDYFEELNQRTFLIVEYGVETCNDATLRLI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+   A  AI    +   R+   +I  LP +   +   +     S  +  L ++Q+ 
Sbjct: 159 NRGHDFDCAKQAIERTASRSIRVGAHIILGLPGEDENESLRQAPIISSLPLTTLKIHQMQ 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS----------NHSF 258
           I +GT   KM+++    L S +  + L     S   A  +    +S              
Sbjct: 219 IIRGTKLAKMYEEHPFHLYSVDEYIHLIAEYISRLRADLILERFVSQSPPELLIAPKWGL 278

Query: 259 LGAESLHNLN 268
              E  H LN
Sbjct: 279 KNYEFTHRLN 288


>gi|298530328|ref|ZP_07017730.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509702|gb|EFI33606.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 320

 Score = 83.0 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 53/163 (32%), Gaps = 2/163 (1%)

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQSLRF 147
             I + + +  ++     +     P  ++    +           + +G+QS   ++L+ 
Sbjct: 96  FRIKNCLKELASLPGLEVLCTGTRPDCLDQEKMRILAGFQAKETWLEMGLQSSRPETLKR 155

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H   +   A  +A     ++   +I  LP + +  +   +       V  + ++ +
Sbjct: 156 INRGHTPDDFAHACRMAHREGLKVCAHVIAGLPGENLEDFLETVDFINLLPVQGIKVHNI 215

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            + K T      + G     S    V+      S      +  
Sbjct: 216 YVCKNTPLAGWWRQGLFTPLSREEYVNWAVAALSRLRPDIVVH 258


>gi|288560940|ref|YP_003424426.1| histone acetyltransferase ELP3 family [Methanobrevibacter
           ruminantium M1]
 gi|288543650|gb|ADC47534.1| histone acetyltransferase ELP3 family [Methanobrevibacter
           ruminantium M1]
          Length = 568

 Score = 82.7 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 36/280 (12%)

Query: 85  EPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            P +  LI D    N       + +T E  P   +  +       GV R+ LGVQ++   
Sbjct: 207 PPNDYVLIDDIQRINENSKVRCIGMTFETRPDYCKEPHVDRMLDMGVTRVELGVQTIYNH 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP-------------KQTMTQWEME 190
               + R H   + I A  + R+   +++  ++  L              +Q +  ++  
Sbjct: 267 IYEKIKRGHKVEDVIEANRILRDSGVKVAMHMMPGLFPLARENPRIEQCPEQDLKMFKE- 325

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---G 247
           +    ++  D L +Y   + +G+  +K++K+G     ++  AV+L    + I        
Sbjct: 326 IFNNENFKPDMLKIYPCLVTEGSELHKLYKEGKYRPYTDEEAVELIVQIKKILPKWVRTM 385

Query: 248 LHAYEISN---HSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVA-ISIEKHPES 303
               +I +    + +   +L  L Y R  +          ++     R   I  +K  + 
Sbjct: 386 RIQRDIPSTLIEAGVKKSNLGELVYNRLEEE---------KINCQCIRCREIGHKKTEQD 436

Query: 304 W----LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLR 338
           +     ++ +++  AV  KE FLS E + +E L   LRLR
Sbjct: 437 YSIDDYRLFQEDYTAVGGKEHFLSIEDKNEESLAGFLRLR 476


>gi|145353824|ref|XP_001421200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581437|gb|ABO99493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 555

 Score = 82.7 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 123/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS    +  +R+
Sbjct: 102 CPHIATTGNVCVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYAQS-RGRVDQLRR 160

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        I  + D               A   + +  V 
Sbjct: 161 LGHAVDKVEFVLMGGTFMSLPIDYRDFFIRNLHDSLSGASSSCVDEAVKASEQSRTKCVG 220

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P   +  + +     G  R+ +G+QS+ E   R   R H  +       LA++ 
Sbjct: 221 LTIETRPDYCQSPHLRQMLSYGCTRLEIGLQSIYEDVARDTNRGHTVAAVQKCFELAKDA 280

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +     +       +  D L LY   + +GT  Y++ + G  
Sbjct: 281 GFKVIAHMMPDLPNVGMERDLESFREFFESPDFRTDGLKLYPTLVIRGTGLYELWRTGKY 340

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   +L   + +     +  Y +          + +   +L  L   R  D 
Sbjct: 341 RNYHPERLV---DLVARVLALVPPWVRVYRVQRDIPMPLVTAGVEKGNLRELAMARMAD- 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        +VG   +   +       +++VR++  A    E FLS E    + L+  
Sbjct: 397 LGLRCRDVRTREVGLQDIHNRVAPTH---VELVRRDYVANGGWETFLSYEDPRQDILVGL 453

Query: 335 LRLRE 339
           LRLR+
Sbjct: 454 LRLRK 458


>gi|50421257|ref|XP_459174.1| DEHA2D15884p [Debaryomyces hansenii CBS767]
 gi|49654841|emb|CAG87345.1| DEHA2D15884p [Debaryomyces hansenii]
          Length = 558

 Score = 82.7 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 126/379 (33%), Gaps = 67/379 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +RQ
Sbjct: 105 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLRQ 163

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VE 107
           L            GGT   +  +     I  + + +        +             V 
Sbjct: 164 LGHSIDKVEYIIMGGTFMSLPVEYRENFITQLHNALTGFNGRDIDEAIKFSQQSQTKCVG 223

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 224 ITIETRPDYCTETHLSDMLKYGCTRLEVGVQSVYEDVARDTNRGHTVKSVCETFAVAKDA 283

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++      
Sbjct: 284 GYKVVSHMMPDLPNVGMERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYEL---WKK 340

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDY 275
            L     A  L +L   I +        Y +     +     G E  +L  L   R  D 
Sbjct: 341 GLYKSYNANALIDLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD- 399

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
              G    +   V +  V I    H   P+  ++++R++ +A    E FLS E    + L
Sbjct: 400 --FG---TTCRDVRTREVGIQEVHHKVAPDQ-VELIRRDYYANGGWETFLSYEDPKKDIL 453

Query: 332 MMGLRLREGISVKDWEMLA 350
           +  LRLR+      +    
Sbjct: 454 IGLLRLRKASKKFTYRKEF 472


>gi|330799437|ref|XP_003287751.1| elongation protein 3 [Dictyostelium purpureum]
 gi|325082206|gb|EGC35695.1| elongation protein 3 [Dictyostelium purpureum]
          Length = 558

 Score = 82.7 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 128/368 (34%), Gaps = 67/368 (18%)

Query: 28  CVK------KCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 111 CPHLAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQT-RSRIDQLKR 169

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN--WTVSS-----------NVE 107
           L            GGT   +        I  + D ++ +    V+             + 
Sbjct: 170 LGHNVEKVEFIIMGGTFMSLPADYRDYFIRNLHDALSGHTSNNVAEAVKYSEQSNVKCIG 229

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H     + +  LA++ 
Sbjct: 230 ITIETRPDHCLKLHLSNMLVYGCTRLEIGVQSVFEDIARDTNRGHTVRAVLESFQLAKDS 289

Query: 168 FPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +     ME     ++  D L +Y   + +GT  Y++ K G  
Sbjct: 290 GFKVVAHMMPDLPNMGMERDIYGFMEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGTY 349

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S +  V   +L   I +        Y I          S +   +L  L   R  D 
Sbjct: 350 KNYSPDSLV---DLIAKILALVPPWTRIYRIQRDIPMPLVTSGVEYGNLRELCLARMKD- 405

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
              G    ++ +    R     E H +     ++++R++  A    E FLS E    + L
Sbjct: 406 --FG----TKCRDVRTREVGIQEVHHKIKPDQVELIRRDYTANGGWETFLSYEDPKQDIL 459

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 460 IGLLRLRK 467


>gi|150863958|ref|XP_001382617.2| hypothetical protein PICST_42410 [Scheffersomyces stipitis CBS
           6054]
 gi|149385214|gb|ABN64588.2| ELongator protein [Scheffersomyces stipitis CBS 6054]
          Length = 558

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 124/379 (32%), Gaps = 67/379 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +R 
Sbjct: 105 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRLEQLRS 163

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VE 107
           L            GGT   +        I  + + +        +             V 
Sbjct: 164 LGHSIDKVEYIIMGGTFMSLPIDYREGFITQLHNALTGYNGKDIDEAIKYSQQSQTKCVG 223

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 224 ITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDA 283

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++      
Sbjct: 284 GYKVVSHMMPDLPNVGMERDLEQFKEYFENPEFRTDGLKLYPTLVIRGTGLYEL---WKK 340

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDY 275
            L     A  L +L   I +        Y +     +     G E  +L  L   R  D 
Sbjct: 341 GLYKSYNANALIDLVARIMAMVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD- 399

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
              G    +   V +  V I    H   P+  ++++R++ +A    E FLS E    + L
Sbjct: 400 --FG---TTCRDVRTREVGIQEVHHKVVPDH-VELIRRDYYANGGWETFLSYEDPKKDIL 453

Query: 332 MMGLRLREGISVKDWEMLA 350
           +  LRLR+      +    
Sbjct: 454 IGLLRLRKASKKYTYRKEF 472


>gi|312137248|ref|YP_004004585.1| radical sam domain protein [Methanothermus fervidus DSM 2088]
 gi|311224967|gb|ADP77823.1| Radical SAM domain protein [Methanothermus fervidus DSM 2088]
          Length = 444

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 76/189 (40%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   S     K  +    ++ + E++   +L    ++  I F   T ++    
Sbjct: 175 CPYNCEYCS--SSKMMGKRFRYRSAENIVDEIE---ELVNDYNVREITFLDDTFTI---- 225

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   I +   +      +++ TI +   ++  +  +  +  G+NRI  G +S  ++ L  
Sbjct: 226 HRRRIEEFCNELKNRDLDIDFTISSRVDTINRDTLKNLKTVGLNRIYYGAESGSQRVLNL 285

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     +   A+ +A+N+  +     ++  P +T+ +    +  ++    D+     L
Sbjct: 286 MKKGITLKQIKDAVKVAKNLNLQTVTSFMFGYPGETLDEMNKTIDFSIKLDPDYCQYSIL 345

Query: 208 TIEKGTLFY 216
           T   GT  Y
Sbjct: 346 TPFPGTPIY 354


>gi|224419093|ref|ZP_03657099.1| hypothetical protein HcanM9_07457 [Helicobacter canadensis MIT
           98-5491]
 gi|253828030|ref|ZP_04870915.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313142602|ref|ZP_07804795.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511436|gb|EES90095.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|313131633|gb|EFR49250.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 320

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 11/179 (6%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           I+F   T +      +  +     +   + + V ++I     SV +            R 
Sbjct: 104 IYFQSFTNTYAPFDTLQKL---YTEALNLPNVVGMSIGTRTDSVNLELLDYLAHLQETRK 160

Query: 133 ----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
               I  G+QS+ +++L+F+ R H        I   +    ++   +IY LPK+T     
Sbjct: 161 QEIWIEYGIQSVYDETLKFINRGHTTEGMEYWIKETKQRGLKVCSHIIYGLPKETKEMML 220

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L++ L +  D + ++ L I + T+  +M+  G+    + N      +L         
Sbjct: 221 NSLKQVLDWGSDGIKVHPLYIIEKTILAQMYAKGEYKPITLNE---YIDLIVETLKMIP 276


>gi|323701325|ref|ZP_08112999.1| hypothetical protein DesniDRAFT_0211 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533584|gb|EGB23449.1| hypothetical protein DesniDRAFT_0211 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 321

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 79/225 (35%), Gaps = 36/225 (16%)

Query: 23  VHWPF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           V+ P  C  +        C +CD           +    +     +    Q+   R+   
Sbjct: 28  VNLPGTCPNRDGTVGRGGCIFCD----------EEGAGFECLPNTLSVQEQIQKNRAFFI 77

Query: 74  ---------IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                    ++F   T + +        +   A    V   V I+I   P  +       
Sbjct: 78  KRFNAQKFIVYFQAFTNTYLPLDQFKENMLAAASEEDV---VGISISTRPDCINDAYLDV 134

Query: 125 YRK----AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            ++     G++  I LG+Q++   +L+ + R H  +E I A++  +     +   +I  L
Sbjct: 135 LQELQTQYGLDINIELGLQTVNYHTLKKVNRGHTLAEFIDAVNRIKLRNFEICVHIILNL 194

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           P   M       +   +  + ++ L+ L + KGT+   M++  + 
Sbjct: 195 PWDNMVDVIENAKILSALGIHYVKLHSLYVVKGTVLATMYQREEF 239


>gi|269798054|ref|YP_003311954.1| hypothetical protein Vpar_0993 [Veillonella parvula DSM 2008]
 gi|269094683|gb|ACZ24674.1| conserved hypothetical protein [Veillonella parvula DSM 2008]
          Length = 321

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 16/211 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +   + 
Sbjct: 48  CTFCG---EIGAGYENRPVWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLSLDDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQ 143
              ++       +   V I I   P  +     +       +R      I LG+Q++  +
Sbjct: 105 KSYMEQGC----IDEAVGIAIATRPDCIADEYLEILADIR-DRFQKDIYIELGLQTVNYE 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H+ +E I A+   +     ++  +I  LP  TM       +   +  VD + 
Sbjct: 160 TLEKINRGHDLAEFIDAVLRIKRYGFNITTHMIVNLPWDTMKDTIEGARILSALGVDQVK 219

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+ L I K TL  K +++G   L S     D
Sbjct: 220 LHALYIVKNTLMAKWYQEGQFTLISAEEYAD 250


>gi|332999290|gb|EGK18876.1| radical SAM superfamily protein [Shigella flexneri K-272]
 gi|333014661|gb|EGK34007.1| radical SAM superfamily protein [Shigella flexneri K-227]
          Length = 309

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +  E Q +  
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +         +   V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 100 MYQQAVSQANI---VGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   +    L+R +  +VD + L+ L
Sbjct: 157 INRGHDFACYQRTTQQARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETSVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            I KG++  K  + G L 
Sbjct: 217 HIVKGSIMAKAWEAGRLN 234


>gi|296271992|ref|YP_003654623.1| hypothetical protein Arnit_0452 [Arcobacter nitrofigilis DSM 7299]
 gi|296096167|gb|ADG92117.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
          Length = 333

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 77/240 (32%), Gaps = 24/240 (10%)

Query: 32  CPYC---DF--------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-------SISS 73
           C +C    F                     ++   L +++     T  R           
Sbjct: 59  CSFCENDSFSPNLQEKKTKFKLHPSNPSNPYLDRQLKQLEMQFNATKERLGNKFGTKKFI 118

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           ++F   T +    + +  +     K  +  + + ++I      V              + 
Sbjct: 119 VYFQSFTNTYAPFETLKAL---YTKALSFENVIGLSIGTRTDCVTDEILDYLATLSKEKE 175

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I  G+QS  +++L  + R   ++     I  ++     +   LIY LP +T       
Sbjct: 176 IWIEYGIQSFYDETLEKINRGDTSANIKKWIKKSKEKGLNVCGHLIYGLPNETQEMMFET 235

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ +   +D +  + L + K TL    +K G     SE + +D    +  +   +    
Sbjct: 236 LRQTIELDIDSIKFHPLYVVKNTLLTNEYKKGRFTPISEELYIDTVVKSIKMLPRNISIQ 295


>gi|290968418|ref|ZP_06559957.1| radical SAM protein, TIGR01212 family [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781414|gb|EFD94003.1| radical SAM protein, TIGR01212 family [Megasphaera genomosp. type_1
           str. 28L]
          Length = 329

 Score = 82.7 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 89/271 (32%), Gaps = 24/271 (8%)

Query: 23  VHWP-FCVKK--------CPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTGPRSI 71
           +  P  C  +        C +C   S    Y+      +  +     +  ++     +  
Sbjct: 25  ISIPDTCPNRDGTLGYKGCVFCG--SIGAGYENLPASVSVARQIAANIAHIQPKYKAKKF 82

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK---- 127
            + +F   T + + P      L          S V + +   P  +         +    
Sbjct: 83  IA-YFQNFTNTYLSPAAFRTFLQAACT----DSIVGLAVATRPDCIHPAYLDILAEIQQQ 137

Query: 128 AGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            GV+  +  G+Q+   ++L  + R H  +E I A+ + R    R+   +I  LP  T   
Sbjct: 138 YGVDICLEFGLQTANYKTLERINRGHTVAEYIDALLMVRPYGFRVCTHVILDLPWDTEAD 197

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                +   +     + L+ L I KGT     +K+G + L      V         T   
Sbjct: 198 TIETAKIISALPNQEIKLHALYIVKGTPMATWYKEGRIRLWPCEEYVRRAVSFLEYTRPD 257

Query: 247 GLHAYEISNHSFLGAESLH-NLNYWRYGDYI 276
            +    +       AE+ +  + +W+  D I
Sbjct: 258 IVFQRLVGRVPKEAAETANWGMGWWKVRDMI 288


>gi|304314970|ref|YP_003850117.1| histone acetyltransferase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588429|gb|ADL58804.1| predicted histone acetyltransferase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 348

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 91/242 (37%), Gaps = 8/242 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T E  P      +       GV R+ LGVQ++     + + R H+  + I +  + 
Sbjct: 15  CVGMTFETRPDYCREEDVDRMLNLGVTRVELGVQTIYNYIYQRIRRGHSIGDVIESNRIL 74

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           R+   +++  L+  L             + +  S+  D L +Y   + +G+  Y + ++G
Sbjct: 75  RDSGIKVAMHLMPGLFSDFDRDLRIFRRIFQDPSFRPDMLKIYPCLVTRGSELYSLWENG 134

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLN--YWRYGDYIG 277
                S   AVDL    + +            +I +   +      NL    +R  +  G
Sbjct: 135 LYKPYSTEEAVDLIVEIKKMMPPWVRTMRIQRDIPSQLIVDGVRKSNLGELVYRRLEEEG 194

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
           +      R +   H     +    ++   MV +       + F+S+E   ++ L+  LRL
Sbjct: 195 VRCRCI-RCREVGHMSRRGVSVDEDAVTVMVEEYDATGGREFFISAEDPENDVLIGFLRL 253

Query: 338 RE 339
           R 
Sbjct: 254 RF 255


>gi|237506936|gb|ACQ99219.1| coproporphyrinogen oxidase-related protein [Tragopogon dubius]
 gi|291481028|gb|ADE06491.1| porphyrin oxidoreductase [Tragopogon porrifolius]
          Length = 111

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)

Query: 34  YCDFN--------SHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLI 84
           YCDF         +          N+I   + E++  +        + ++FFGGGTPSL+
Sbjct: 1   YCDFPILALGSSSTETADDDPRISNYIHLLIREIEATQTHFEQHPPLETVFFGGGTPSLV 60

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            P+ +A +LD +   + +  + EI++E +P + +    +     GVNR+SL
Sbjct: 61  PPRLVAKVLDTLRSKFRLCLDAEISMEMDPGTFDAQKLKDLMGLGVNRVSL 111


>gi|302345324|ref|YP_003813677.1| radical SAM protein, TIGR01212 family [Prevotella melaninogenica
           ATCC 25845]
 gi|302149203|gb|ADK95465.1| radical SAM protein, TIGR01212 family [Prevotella melaninogenica
           ATCC 25845]
          Length = 303

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCD    V +     + F      EM+++            +F   T +     +I  + 
Sbjct: 55  YCDNGKSVTQQLEDGKLFFSGKYPEMKYLA-----------YFQAYTNTYGTNDHIKKLY 103

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           +   +   V   V + I   P  +  +    F+   +     +  GV++  +++LR + R
Sbjct: 104 E---EALAVKDVVGLVIGTRPDCINDDLLDYFEELNRRTFLIVEYGVETCNDETLRLVNR 160

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ + A  AI        R+   +I  LP +   +   +     S  +  L ++QL I 
Sbjct: 161 GHDFACARKAIEETARRGIRVGAHIILGLPGEDAKESLRQAPIISSLPLTTLKIHQLQII 220

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +GT   KM+ +    L +    + L     S+   
Sbjct: 221 RGTRLAKMYAEKPFHLYTVEEYIKLIADYISLLRP 255


>gi|322497930|emb|CBZ33005.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 759

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++  +     R+ G  R+ LGVQ  ++  L  + R     +   AI L +
Sbjct: 312 IGVTLETRPDTINPDMLVELRRFGCTRVQLGVQHTDDGILTLVNRQSTREDTANAIKLLK 371

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  +    +      L       D   +Y       ++  + +KDG
Sbjct: 372 DSCFKVDIHLMPDLPGASPAVDKAMFDDVLDSPYLQADQWKIYPCQTTPFSVIEQWYKDG 431

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                     +D+    ++ 
Sbjct: 432 KYTPYGLENLIDVLLYAKAR 451


>gi|332163060|ref|YP_004299637.1| hypothetical protein YE105_C3440 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667290|gb|ADZ43934.1| hypothetical protein YE105_C3440 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862732|emb|CBX72874.1| uncharacterized protein yhcC [Yersinia enterocolitica W22703]
          Length = 300

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 84/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   Q    ++    +          +F   T +      +  
Sbjct: 45  CTFCNVASFA-----DEQMQQQGITQQLAEQAKKANRAKRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V         GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAVMYEQALAEADIVGLCVGTRPDCVPDAVLGLLSGYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEEQAQCMETLEKVVATGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSIMAKAWRAGRLPELALEDYVLTAGEMIRHTPADIVYHR--ISASAR 266


>gi|196009157|ref|XP_002114444.1| conserved hypothetical protein [Trichoplax adhaerens]
 gi|190583463|gb|EDV23534.1| conserved hypothetical protein [Trichoplax adhaerens]
          Length = 515

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 133/414 (32%), Gaps = 75/414 (18%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEM------QWMRQL 65
           C         C YC      DF     S+              +   +      + +RQL
Sbjct: 85  CPHISMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQVKHRTEQLRQL 144

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   ++ +     I  + D ++ +              + +  + I
Sbjct: 145 GHNVDKVEFIVMGGTFMALDEEYRDYFIRNLHDALSGHTSNNVEEAVKYSEHSKTKCIGI 204

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H       +   A++  
Sbjct: 205 TIETRPDYCLKKHLSSMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQQAKDAG 264

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +      E     ++  D L +Y   + +GT  Y++ K G   
Sbjct: 265 FKVVAHMMPDLPNVDIERDIQGFTEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYR 324

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +V +   +L   I +        Y +          S +   +L  L   R  D  
Sbjct: 325 SYPPDVLI---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL- 380

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               G   R           + +  + + ++++R++ +A    E FLS E          
Sbjct: 381 ----GTECRDVRTREVGIQELHQKVKPYEVELIRRDYYANGGWETFLSYED--------T 428

Query: 335 LR--LREGISVKDWEMLAGRNLDIECERN--LQRQGF--IERVQFSRLRCTQRG 382
            R  L+ G S+     L G  + +        Q QGF  +   +  R+   + G
Sbjct: 429 FRSELKGGCSIVRELHLYGSVVPVSARDPTKFQHQGFGMLLMEEAERIALEEHG 482


>gi|194766229|ref|XP_001965227.1| GF21222 [Drosophila ananassae]
 gi|190617837|gb|EDV33361.1| GF21222 [Drosophila ananassae]
          Length = 672

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 122/367 (33%), Gaps = 65/367 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLSEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS------YAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   ++  LP      +E ++++ +       +  D L +Y   + +GT  Y++ K 
Sbjct: 280 GYKIVAHMMPDLPN---VDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKT 336

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGD 274
           G       ++ VDL     ++        Y +          S +   +L  L   R  D
Sbjct: 337 GRYKSYPPSMLVDLVAKILALLPPWT-RVYRVQRDIPMPLVSSGVEHGNLRELALARMKD 395

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
                 G   R           I      + ++++R++  A    E FLS E    + L+
Sbjct: 396 L-----GTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILV 450

Query: 333 MGLRLRE 339
             LRLR+
Sbjct: 451 GLLRLRK 457


>gi|306820566|ref|ZP_07454197.1| radical SAM protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551383|gb|EFM39343.1| radical SAM protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 311

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 86/235 (36%), Gaps = 18/235 (7%)

Query: 28  CVKK------CPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISSIFFGGGT 80
           C  +      C YC  +  V    +  +  + S  L  + ++ +        + +F   T
Sbjct: 29  CPNRKDGMGGCTYCS-DIAVGYEMLSNDMGVSSQLLKNIDYIGKKYKAEKFIA-YFQNFT 86

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVN-RISL 135
            + ++ ++ A  +    +       VEI +   P  V         +     G+N  I L
Sbjct: 87  NTYLKLEDFARYISDAVR----DDVVEIAVSTRPDCVNDRYLDILDEIKEKTGINICIEL 142

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS+   +L+ + R H+ +E I A+   +     +S  +I  LP   +       +   
Sbjct: 143 GLQSVNYNTLKLINRGHSLAEYIDAMIRIKKYGFDVSTHMILNLPYDNLEDVIEAAKILS 202

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   D + ++ L I K T+  + +  G L + +    V       +  S   +  
Sbjct: 203 ALKTDFVKMHSLYIAKNTVMEQEYSLGKLNMGTIEDYVQRAGEFIAYLSKDIVIQ 257


>gi|320170857|gb|EFW47756.1| elongator complex protein 3 [Capsaspora owczarzaki ATCC 30864]
          Length = 557

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 122/364 (33%), Gaps = 59/364 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+       +++
Sbjct: 109 CPHIAMTGNVCTYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRV-DQLKR 167

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VE 107
           L            GGT   ++P+     I  + D ++ + +   +             + 
Sbjct: 168 LGHSVDKVEFIVMGGTFMSLDPEYRDYFIRNLHDALSGHTSNDVDEAVRYSERSNTKCIG 227

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H          L ++ 
Sbjct: 228 ITIETRPDYCLKPHISSMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCECFQLGKDS 287

Query: 168 FPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +      E     ++  D L LY   + +GT  Y++ K G  
Sbjct: 288 GYKVVTHMMPDLPNVGLERDLEGFVEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRY 347

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
                +V VDL     ++        Y +          S +   +L  L   R  D   
Sbjct: 348 RSYPPSVLVDLIAKVMALVPPWTRI-YRVQRDIPMPLVSSGVEHGNLRELALERMRDL-- 404

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
              G+  R           I      + ++++R++  A    E FLS E    + L+  L
Sbjct: 405 ---GSECRDVRTREVGIQEIHNKVRPYQIELIRRDYVANGGWETFLSYEDPEQDILIGLL 461

Query: 336 RLRE 339
           RLR+
Sbjct: 462 RLRK 465


>gi|61403581|gb|AAH91787.1| Elp3 protein [Danio rerio]
          Length = 455

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 71/372 (19%), Positives = 122/372 (32%), Gaps = 58/372 (15%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+     + ++QL 
Sbjct: 9   HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQLG 67

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVEIT 109
                      GGT   +  +     I  + D                   + +  V IT
Sbjct: 68  HSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSNNVTEAVRYSERSNTKCVGIT 127

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R +       + HLA++   
Sbjct: 128 IETRPDYCLKRHLSDMLGYGCTRLEIGVQSVYEDVARDTNRGYTVRAVCESFHLAKDAGF 187

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           ++   ++  LP   M +   +         +  D L LY   + +GT  Y++ K G    
Sbjct: 188 KVVAHMMPDLPNVGMERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKS 247

Query: 227 PSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLG-------AESLHNLNYWRYGDYIG 277
            S +  V   +L   I +        Y +     +          +L  L   R  D   
Sbjct: 248 YSPSALV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDM-- 302

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
              G   R           I      + ++++R++  A    E FLS E    + L+  L
Sbjct: 303 ---GTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVANGGWETFLSYEDPEQDILIGLL 359

Query: 336 RLREGISVKDWE 347
           RLR   S + + 
Sbjct: 360 RLRR-CSPQSFR 370


>gi|78221328|ref|YP_383075.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78192583|gb|ABB30350.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 624

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC      +  +      + + L  +  +R       +    F       ++ +
Sbjct: 192 CDFACEYCFDYKGTKGVRRFSLERVDAELDFL--VRHNVPQVFVLDSTFN------VDAK 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               IL  I K    + ++    E     ++    + +     + + +G+QS +   L+ 
Sbjct: 244 RAKTILRMIRKR---APHIHFHFEVRSEFLDREMARLFAGITCS-LQIGLQSADPAILKG 299

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R+ +  +    + L         FDLIY LP  ++  +   L  AL+   +HL ++ L
Sbjct: 300 IRRHFDPDDFRKRVALLNESGAVFGFDLIYGLPGDSLAGFRQSLDFALALYPNHLDIFPL 359

Query: 208 TIEKGTLFYKM 218
            +  GT     
Sbjct: 360 AVLPGTPLAAR 370


>gi|123443917|ref|YP_001007888.1| hypothetical protein YE3734 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090878|emb|CAL13760.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 300

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 84/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   Q    ++    +          +F   T +      +  
Sbjct: 45  CTFCNVASFA-----DEQMQQQGIAQQLAEQAKKANRAKRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAVMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L++ +   VD + L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEEQAQCMETLEKVVVTGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSIMAKAWRAGRLPELALEDYVLTAGEMIRHTPADIVYHR--ISASAR 266


>gi|257053991|ref|YP_003131824.1| histone acetyltransferase, ELP3 family [Halorhabdus utahensis DSM
           12940]
 gi|256692754|gb|ACV13091.1| histone acetyltransferase, ELP3 family [Halorhabdus utahensis DSM
           12940]
          Length = 554

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 8/200 (4%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P+   +  F    P   +  +   + D IA 
Sbjct: 163 TMTARSHDYQEWFVKRALQAMNEYDPDCDPQPSETESF-AQDP---DAYDFRYLEDVIAD 218

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T S  NV  T E  P            + G  ++ +GVQ+  E   R + R H    +
Sbjct: 219 NETGSIRNVATTFETKPDWCGPEQVDRMLRLGGTKVEVGVQTTYESINREMHRGHGVDAS 278

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTL 214
           I A    R+   ++ F ++   P  T      + +R      +  D+L +Y   +  GT+
Sbjct: 279 IEANRRLRDAGFKVGFHMMPGQPGMTEEMVREDFRRLFEQPEWRPDYLKIYPTLVVGGTV 338

Query: 215 FYKMHKDGDLVLPSENVAVD 234
            Y MH+  +    +   A +
Sbjct: 339 TYDMHRRDEFEPLTSEEAAE 358


>gi|323507789|emb|CBQ67660.1| probable ELP3-subunit of elongator/RNAPII holoenzyme with histone
           [Sporisorium reilianum]
          Length = 566

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 69/365 (18%), Positives = 124/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS    +Q +R+
Sbjct: 95  CPHIALTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQS-KNRVQQLRE 153

Query: 65  LTGPRSISSIFFGGGTPSLIEP----QNIALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +      Q IA + +                    ++  + 
Sbjct: 154 LGHSVDKVEYIIMGGTFMSLSETYRNQFIAQLHNALSGFNGQDVDEAVKYSERALTKCIG 213

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA++ 
Sbjct: 214 ITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFQLAKDA 273

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       +  D L LY   + +GT  Y++ + G  
Sbjct: 274 GYKIVAHMMPDLPNVGVERDMEQFKEYFENPAFRTDGLKLYPTLVIRGTGLYELWRTGRY 333

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDY 275
              + +  V   +L   I +        Y +     +   S       L  L   R  D+
Sbjct: 334 KNYTPSFLV---DLIARILALVPPWTRVYRVQRDIPMPLVSSGVENGNLRELALERMRDF 390

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            G+        +VG H +   +       ++ +R++  A    E FL+ E    + L+  
Sbjct: 391 -GVTCRDVRYREVGLHEIHTKVRPDE---VEFIRRDYTANGGWESFLAYEDPEKDILIAL 446

Query: 335 LRLRE 339
           LRLR+
Sbjct: 447 LRLRK 451


>gi|288940795|ref|YP_003443035.1| hypothetical protein Alvin_1064 [Allochromatium vinosum DSM 180]
 gi|288896167|gb|ADC62003.1| conserved hypothetical protein [Allochromatium vinosum DSM 180]
          Length = 324

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 18/236 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S     K   E  I   L   + +            +F   
Sbjct: 41  CPNRDGTKGHGGCTFCNNVSFGPNAKRSPE--IDPQLDAGRGVLAKRTGARRFMAYFQTY 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +      I+++ +           V +++   P  V                   + L
Sbjct: 99  TNTY---DEISVLRERYDSALMHPDVVGLSVGTRPDCVPEAVLDLLAGYRARGKEVWLEL 155

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  + +L  + R H  +E  +A+  A      +   LI  LP +   +    L R L
Sbjct: 156 GLQSANDDTLERVNRGHGFAEYRSAVTAAHRRGIPVCAHLIVGLPGEGHAEALTTLDRVL 215

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHA 250
              V+ L ++ L + + T        GD   L  ++      +L +   ++   H 
Sbjct: 216 ELGVEGLKVHPLHVVRHTRLAIDWHRGDYSPLAMDDYVAICADLVERTPASVVYHR 271


>gi|300711177|ref|YP_003736991.1| histone acetyltransferase, ELP3 family protein [Halalkalicoccus
           jeotgali B3]
 gi|299124860|gb|ADJ15199.1| histone acetyltransferase, ELP3 family protein [Halalkalicoccus
           jeotgali B3]
          Length = 551

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 77/219 (35%), Gaps = 14/219 (6%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF----GGGTPSLIEPQNIALILD 94
           +   R    QE+F++  L  M        P       F         S +E      ++ 
Sbjct: 163 TMTARSHDYQEHFVKRALEAMNDFDPENPPEPTEGESFAQSHDEYDFSYLED-----VIA 217

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
               N     N+  T E  P   +          G  ++ +GVQ+  E+  R + R H A
Sbjct: 218 ENETNGVR--NIGTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGA 275

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEK 211
             +I A    R+   ++ F ++   P  ++     + Q+      +  D+L +Y   + +
Sbjct: 276 QASIDANRRLRDAAFKVGFHMMPGQPGMSLDMCREDFQQLFEDANWRPDYLKIYPNLVVR 335

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT  Y M +  +    +   A +L    +++   +    
Sbjct: 336 GTRTYDMWRREEFDPLTNEQAAELVAEIKAMLPKYVRLQ 374


>gi|322489940|emb|CBZ25200.1| histone acethyltransferase-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 768

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P +         R+ G  R+ LGVQ  ++  L  + R     +   AI L +
Sbjct: 321 IGVTLETRPDTTNPEMLVELRRFGCTRVQLGVQHTDDGILTLVNRQSTREDTANAIKLLK 380

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  +    +      L       D   +Y       ++  + +KDG
Sbjct: 381 DSCFKVDIHLMPDLPGASPAVDKAMFDDVLDSPYLQADQWKIYPCQTTPFSVIEQWYKDG 440

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                     +D+    ++ 
Sbjct: 441 KYTPYGLENLIDVLLYAKAR 460


>gi|320157397|ref|YP_004189776.1| putative Fe-S oxidoreductase [Vibrio vulnificus MO6-24/O]
 gi|319932709|gb|ADV87573.1| predicted Fe-S oxidoreductase [Vibrio vulnificus MO6-24/O]
          Length = 318

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        ++  ++S   ++               +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEQAQVKSIREQLTERAGEVHRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++ +   +    +  V + +   P  V              G      L
Sbjct: 88  TSTY---AEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L+ + R H+          AR +  ++   LI  LPK++       L++ +
Sbjct: 145 GLQTASNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRNDNFTTLEKVI 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  + G L  P     V++       T    +    +S+
Sbjct: 205 EVGTDGIKLHGLHIVEGSTMAKAWRAGKLDAPELEQYVEIACEMIRRTPPEVIFH-RVSS 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|332704764|ref|ZP_08424852.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554913|gb|EGJ51957.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 490

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 79/243 (32%), Gaps = 21/243 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R Y+     +       ++ +R   G R +    F     +     
Sbjct: 220 CPYACSYCDRSVFGRSYRFNSAQY---LYEHLRHLRDRFGIRHV---NFYDDQFTF---- 269

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +           +        + ++ +  +  + AG    SLG+++ ++  L  
Sbjct: 270 HKKRVEEFTDMLVAKPLGMTFNCAVRANHIDEDLIRRLKAAGCWMTSLGIETGDQALLER 329

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R  +  +    I L +    R+   L+  LP +T        +   S  VD L++ + 
Sbjct: 330 QNRKIDLGDLGEKIKLVKRHGIRVKGLLMMGLPGETEETIAKTKRYVFSLPVDDLNMTKF 389

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYN----------LTQSITSAHGLHAYEISNHS 257
           T   G+  Y   K  +  L   +      +          +T+          Y+ S+ +
Sbjct: 390 TPFPGSPIYDEIKAANGQLGEFDEDWQRMDCMHFLFVAKGMTRERLDELHRDFYK-SHFT 448

Query: 258 FLG 260
              
Sbjct: 449 RPK 451


>gi|149194160|ref|ZP_01871258.1| hypothetical protein CMTB2_03708 [Caminibacter mediatlanticus TB-2]
 gi|149136113|gb|EDM24591.1| hypothetical protein CMTB2_03708 [Caminibacter mediatlanticus TB-2]
          Length = 314

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 88/258 (34%), Gaps = 34/258 (13%)

Query: 23  VHWPF--CVKK--------CPYC---DFNSHVRRYKV------GQENFIQSFLTEMQW-- 61
           +  P   C           C +C    F+ + ++ K            ++  L  +++  
Sbjct: 24  ISIPGFTCPNIDGTVARGGCVFCENESFSPNFQKEKTYLNLQSKTNPLLEKQLKSLEFQF 83

Query: 62  ------MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                 ++++ G +    ++F   T +    + +  + +   K  +    + I+I     
Sbjct: 84  FNTIPILKKVYGTKKFI-VYFQSFTNTYAPFETLKTLYE---KALSFPDVIGISIGTRTD 139

Query: 116 SV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           S+    +       K     +  G+QS   ++L+ + R H     +      + +   + 
Sbjct: 140 SIAPQTLEYLAELSKKYEVWVEYGIQSSNNETLKRINRGHTFENVVEVTKKTKELGLNVC 199

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
             LI+ LP +   +    ++  ++  +D +  + L +   TL    +K G     SE   
Sbjct: 200 GHLIFGLPGENQKEMLKSVEETINLNIDSIKFHPLYVTDNTLLANDYKKGLFNPISEEEY 259

Query: 233 VDLYNLTQSITSAHGLHA 250
           +D    +  +   +    
Sbjct: 260 IDTLIKSIKMLPQNISIQ 277


>gi|34556884|ref|NP_906699.1| hypothetical protein WS0457 [Wolinella succinogenes DSM 1740]
 gi|34482599|emb|CAE09599.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 315

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 6/163 (3%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           ++F   T +    + +  +     +   V   V I+I     SV         +    + 
Sbjct: 101 VYFQSFTNTYAPIETLKRLYSEAFRLPDV---VGISIGTRIDSVNHEILDFLGEYAREKE 157

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I  G+QS+ +++L  + R H++SE    I   +N   ++   LIY LP ++       
Sbjct: 158 VWIEYGIQSIHDRTLEGINRGHDSSEMEYWIKETQNRGIKVCVHLIYGLPGESEEMMLET 217

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           L + + +  + + ++ L +   T    ++K G+    +     
Sbjct: 218 LDKMIEWQAESIKIHPLYVMAHTALATLYKKGEYTPITLERYA 260


>gi|238793686|ref|ZP_04637308.1| hypothetical protein yinte0001_630 [Yersinia intermedia ATCC 29909]
 gi|238726927|gb|EEQ18459.1| hypothetical protein yinte0001_630 [Yersinia intermedia ATCC 29909]
          Length = 307

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 23/244 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   S        Q     S   ++    + T        +F   
Sbjct: 33  CPNRDGTLGRGGCTFCQVASFADENMQQQ-----SIAQQLAAQAKKTNRAKRYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SL 135
           T +      +  +     +    +  V + +   P  V     +   GY + G      L
Sbjct: 88  TSTY---AEVNALAVMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +        AR    ++   LI  LP +  +Q    L++ +
Sbjct: 145 GLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDKSQNMATLEQVV 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  VD L L+ L I +G+   K  + G L  L  E   V    + +   +    H   IS
Sbjct: 205 ATGVDGLKLHPLHIVEGSTMGKAWRAGRLPELALEQYVVTAGEMIRHTPAQIVYHR--IS 262

Query: 255 NHSF 258
             + 
Sbjct: 263 ASAR 266


>gi|46579203|ref|YP_010011.1| radical SAM family protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603226|ref|YP_967626.1| radical SAM protein [Desulfovibrio vulgaris DP4]
 gi|46448616|gb|AAS95270.1| radical SAM protein, TIGR01212 family [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563455|gb|ABM29199.1| conserved hypothetical radical SAM protein [Desulfovibrio vulgaris
           DP4]
 gi|311233038|gb|ADP85892.1| conserved hypothetical protein [Desulfovibrio vulgaris RCH1]
          Length = 351

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 82/215 (38%), Gaps = 6/215 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  +       G    ++      +     +   ++   +    + +    + +  
Sbjct: 48  CVFCN-PAGSGSGMGGAGLSLEEQWALWRARYARSRNAALYIAYLQSFSNTYGSAERLRE 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGVQSLEEQSLRFLG 149
           +L  + +   +S    I++   P  ++         AG +   + LGVQS  + +LR + 
Sbjct: 107 MLLQLRRLEGISG---ISVGTRPDCLDGPKLDLLADAGFDETWLELGVQSAHDDTLRRIN 163

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+A+ + AAIH A     R+   +I+ LP +        ++      V  +  + L +
Sbjct: 164 RGHDAACSAAAIHGAAARGLRVCAHVIFGLPGECAEAMLDTVRWLNGLPVLGVKFHALYV 223

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +GT      + G     S++  VDL     ++  
Sbjct: 224 CRGTTLAAQWRGGLYDPMSQSAYVDLMVEALALLR 258


>gi|39941138|ref|XP_360106.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145022138|gb|EDK06158.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 569

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 81/427 (18%), Positives = 139/427 (32%), Gaps = 81/427 (18%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 114 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKAL 173

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDG--IAKNWTVSSNVE-----------I 108
                 +  I  GG     P       I+ + +     +   V   VE           I
Sbjct: 174 GHSVDKVEYIIMGGTFMSLPESYRDDFISQLHNALSGYQTSNVDEAVEAGEMSNVKCVGI 233

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 234 TIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 293

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 294 FKVVSHMMPDLPNVGMERDVDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 353

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +   S       L  L   R  D  
Sbjct: 354 NYTPNGLI---DLVARILALVPPWTRIYRVQRDIPMPLVSSGVENGNLRELALARMKD-- 408

Query: 277 GIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
             G    +   V +  V I+  KH    + +++VR++  A    E FL+ E    + L+ 
Sbjct: 409 -FG---TTCRDVRTREVGINEVKHKIRPNQVELVRRDYVANGGWETFLAYEDPKQDILIG 464

Query: 334 GLRLREGISVKDW-EMLAGRNLDIECE---------------RNLQRQGF--IERVQFSR 375
            LRLR+      + E L G+   +  E               +  Q QGF  +   +  R
Sbjct: 465 LLRLRKCTEKYTFREELTGQPTSLVRELHVYGTAVPVHARDPKKFQHQGFGTLLMEEAER 524

Query: 376 LRCTQRG 382
           +   + G
Sbjct: 525 IARDEHG 531


>gi|325115777|emb|CBZ51332.1| putative elongator complex protein 3 [Neospora caninum Liverpool]
          Length = 974

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 38/230 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----------SISSIF 75
           C   C YC +     R Y   +   +++   +   +RQ                 I  + 
Sbjct: 266 CPHNCHYCPNEPGQPRSYLSTEPAVLRANQNDWDAVRQFHDRASTLQGNGHTVDKIEVLV 325

Query: 76  FGG---GTPSLIEPQNIALILDG---------IAKNWTVSSN-----------VEITIEA 112
            GG   G PS  + + I  +                  +              + +T+E 
Sbjct: 326 LGGTWSGYPSDYQEEFIRDLFYAANVFNSPLPFRPKLPLEEEQTANETAECRIIGLTLET 385

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     +  R+ G  R+ LG+Q +E + L+++ R     +A+ AI L ++   ++ 
Sbjct: 386 RPDFINRFEIRKLRRFGCTRVQLGLQHVENEVLQYINRGCERHDAVKAIRLLKDSGYKVD 445

Query: 173 FDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMH 219
             ++  LP  T  +        L       D   LY   +   +   + +
Sbjct: 446 IHIMPDLPSSTAERDLRMFFYLLGSSDLQADQWKLYPCEVTPFSEIERWY 495


>gi|198436737|ref|XP_002131669.1| PREDICTED: similar to elongation protein 3 homolog [Ciona
           intestinalis]
          Length = 548

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 139/427 (32%), Gaps = 82/427 (19%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 99  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 157

Query: 65  LTGPRSISSIFFGGGTPSLIEP-------QNIALILDGIAKNW----------TVSSNVE 107
           L            GGT   +         +N+   L G   N           + +  + 
Sbjct: 158 LGHSVDKVEFIVMGGTFMSLPDTYKDYFIRNLHDALSGHRSNNVEEAVKYSERSRTKCIG 217

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  +A++ 
Sbjct: 218 ITIETRPDYCLKKHQSEMLTYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFQIAKDC 277

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 278 GFKVVTHMMPNLPNVRLERDIEQFVEFFENPAFRPDGLKIYPTLVIRGTGLYELWKTGRY 337

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                +  +   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 338 QSYPPSTLI---DLVAKILALVPPWTRIYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 394

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I    + + ++++R++  A    E FLS E    + L+ 
Sbjct: 395 -----GTTCRDVRTREAGIQQIHHKVKPYEVELIRRDYTANGGWETFLSYEDPEQDILVG 449

Query: 334 GLRLREGISVKDWE-MLAGRNLDIECE---------------RNLQRQGF--IERVQFSR 375
            LRLR+  S + +   L G+   +  E                  Q QGF  +   +  R
Sbjct: 450 LLRLRK-CSQEAFRPELKGKGASLVRELHVYGSVVPVSSRDPAKFQHQGFGTLLMEEAER 508

Query: 376 LRCTQRG 382
           +   + G
Sbjct: 509 IALEEHG 515


>gi|15678839|ref|NP_275956.1| hypothetical protein MTH817 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621908|gb|AAB85317.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 545

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 88/242 (36%), Gaps = 8/242 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T E  P      +       GV R+ LGVQ++     + + R H+  + + +  + 
Sbjct: 215 CVGMTFETRPDYCREEDVDRMLGLGVTRVELGVQTIYNYIYQRIKRGHSIRDVVESNRIL 274

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           R+   +++  L+  L             + R  S+  D + +Y   + +G+  Y + + G
Sbjct: 275 RDSGVKVAMHLMPGLFSDFERDLRIFRRIFRDPSFRPDMIKIYPCLVTRGSELYSLWERG 334

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNLNYWRYG--DYIG 277
                S   AV+L    + +            +I +   +      NL    Y   +  G
Sbjct: 335 LYKPYSTEEAVELIVEIKKMMPKWVRTMRIQRDIPSRLIVDGVRKSNLGEMVYRRLEEEG 394

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRL 337
           +      R +   H     +    ++   MV +       + FLS E   ++ L+  LRL
Sbjct: 395 VRCRCI-RCREVGHMSRRGVRVDEDAVTLMVEEYAATGGREFFLSQEDPENDVLVGFLRL 453

Query: 338 RE 339
           R 
Sbjct: 454 RF 455


>gi|291333585|gb|ADD93279.1| RNA polymerase II complex ELP3 subunit [uncultured archaeon
           MedDCM-OCT-S08-C92]
          Length = 430

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 7/176 (3%)

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           G  S +  + +  + + +  N         +TIE  P+     +    RK G  R+ +GV
Sbjct: 164 GAFSTLNGKELP-LEEALQVNGDAKHKCVALTIETRPTECTPWSVFQMRKQGATRVEIGV 222

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-- 195
           Q L+++    L R     + + A  L +    ++ + L+  LP     +   + +R    
Sbjct: 223 QCLDDEVHGKLNRKQLVEDVVKATKLLKEAGLKVVYHLMPGLPGMNPEKDLRDFKRLFEE 282

Query: 196 -SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  D L LY   + KG+   +     D V      A  L    + I   +    
Sbjct: 283 EEFQPDMLKLYPTLLVKGSALARDPG--DFVPYDTETAASLIADLKEIVPPYVRIQ 336


>gi|328874337|gb|EGG22702.1| elongation protein 3 [Dictyostelium fasciculatum]
          Length = 563

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 127/368 (34%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 115 CPHIAMTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQT-KSRIDQLKR 173

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN--WTVSS-----------NVE 107
           L            GGT   +        I  + D ++ +    V+             V 
Sbjct: 174 LGHSVEKVEFIIMGGTFMSLPADYRDYFIRNLHDALSGHTSNNVAEAVKYSEQSNIKCVG 233

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H     + +  LA++ 
Sbjct: 234 ITIETRPDHCLKLHLSNMLTYGCTRLEIGVQSVYEDIARDTNRGHTVKATLESFQLAKDS 293

Query: 168 FPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +     ME      +  D L +Y   + +GT  Y++ K G  
Sbjct: 294 GFKVVAHMMPDLPNMGMERDIYGFMEFFENPDFRADGLKIYPTLVIRGTGLYELWKTGTY 353

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              + +  V   +L   I +        Y I          S +   +L  L   R  D 
Sbjct: 354 KNYAPDALV---DLIAKILALVPPWTRIYRIQRDIPMPLVTSGVEYGNLRELCLARMKD- 409

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
              G    ++ +    R     E H +     ++++R++  A    E FLS E    + L
Sbjct: 410 --FG----TKCRDVRTREVGIQEVHHKIKPDQVELIRRDYMANGGWETFLSYEDPKQDIL 463

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 464 IGLLRLRK 471


>gi|115438320|ref|XP_001218036.1| hypothetical protein ATEG_09414 [Aspergillus terreus NIH2624]
 gi|114188851|gb|EAU30551.1| hypothetical protein ATEG_09414 [Aspergillus terreus NIH2624]
          Length = 572

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 124/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 115 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 174

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        IA + + ++   T + +             V I
Sbjct: 175 GHSVDKVEYIIMGGTFMSLPEDYRESFIAQLHNALSGYQTDNVDEAVLAGEMSNVKCVGI 234

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 235 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 294

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 295 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 354

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 355 NYTPNALI---DLVARILALIPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 409

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +     P   +++VR++  A    E FL+ E    + L+  L
Sbjct: 410 -FGTTCRDVRTREVGVNEVKNRIRPSQ-IELVRRDYTANGGWETFLAYEDPKQDILIGLL 467

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+      +     G+   I  E
Sbjct: 468 RLRKCSPTHTFRPEFTGQQTSIVRE 492


>gi|331091123|ref|ZP_08339965.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405345|gb|EGG84881.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 314

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 90/264 (34%), Gaps = 29/264 (10%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFGGGTPSLIEPQNIAL 91
           C F + V       E+ + S   +++  ++    R        +F   T + +  +    
Sbjct: 42  CSFCADVGTGFEAMESSV-SVTEQLEKTKEYISKRYHAKKFIAYFQNYTNTYMPLEIFKK 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQSLR 146
            +        +   VEI+I   P  V  +  Q  +           + LG+Q++   +L 
Sbjct: 101 YILEAVSIPDI---VEISISTRPDCVREDYLQFLKVIEKTYHISIHLELGLQTVNYHTLD 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           F+ R H  +E I A+   +     +   LI  LP  T+       +   +  +D + L+ 
Sbjct: 158 FISRGHGLAEYIDAVRRIQKYGFSICTHLILNLPHDTLRDTIETAKTMSALEIDIVKLHS 217

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENV---------AVDLYNLTQSIT-----SAHGLHAYE 252
           L I K T   + ++ G + L S+           A     +              + +  
Sbjct: 218 LYIPKNTPLCEAYEHGTINLCSKEEYIERLATFLAYLSPQIIVERLFSRVPEKDAVFSNW 277

Query: 253 ISNHSFLGAESLHNLNYWRYGDYI 276
            ++   L  E+   L Y    +Y 
Sbjct: 278 NTSWWKLQDEA---LAYMEEKEYY 298


>gi|121712678|ref|XP_001273950.1| histone acetyltransferase, putative [Aspergillus clavatus NRRL 1]
 gi|119402103|gb|EAW12524.1| histone acetyltransferase, putative [Aspergillus clavatus NRRL 1]
          Length = 576

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 74/385 (19%), Positives = 126/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 119 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 178

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   + P      IA + + ++   T S +             V I
Sbjct: 179 GHSVDKVEYIVMGGTFMSLPPDYRESFIAQLHNALSGYQTDSVDEAVQAGEMSNIKCVGI 238

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 239 TIETRPDYCLDTHLSDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 298

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 299 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 358

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  V   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 359 NYTPNALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 413

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 414 -FGTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYTANGGWETFLAYEDPKQDILIGLL 471

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+      +     G+   I  E
Sbjct: 472 RLRKCSPTHTFRPEFTGQQTSIVRE 496


>gi|307565525|ref|ZP_07628005.1| radical SAM protein, TIGR01212 family [Prevotella amnii CRIS 21A-A]
 gi|307345684|gb|EFN91041.1| radical SAM protein, TIGR01212 family [Prevotella amnii CRIS 21A-A]
          Length = 315

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 82/219 (37%), Gaps = 12/219 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YCD N          EN  +S   +++  ++    +  +     +F   T +  + Q+
Sbjct: 60  CIYCD-NRTFNPSYCSVEN--KSVTRQIEEGKRFFSGKYPNMKYLAYFQAYTNTYGDIQH 116

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSL 145
           +  +     +   V   V I I   P  V  +    F    K     +  G++++ + +L
Sbjct: 117 LKRLYSEALQ---VEDVVGIVIGTRPDCVSEDLLNYFTELNKVTFLLVEYGIETVNDATL 173

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R + R H  + +   I        R+   +I  LP +   +   +     S  +  L ++
Sbjct: 174 RLINRGHTFACSRQMIERTAARGIRVGAHIILGLPGEDRQESLRQAPIISSLPLTTLKIH 233

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           Q+ I +GT   KM+ +    L + +  + L     S+  
Sbjct: 234 QMQIIRGTKLAKMYVENPFHLYTVDEYITLIADYISLLR 272


>gi|77920550|ref|YP_358365.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77546633|gb|ABA90195.1| Predicted Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 306

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 83/228 (36%), Gaps = 19/228 (8%)

Query: 32  CPYCD------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +CD      F  H  R     E          + M +    +     +F   + +   
Sbjct: 44  CLFCDPDGSGSFGIH--RGLAVAEQ----LERGKEIMVRKYKAKHF-LAYFQPFSNTFAP 96

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
           P+ +  + D   +   VS  V +T+   P            +        + LG+QS  +
Sbjct: 97  PERLRSLYD---EALGVSGVVGLTVGTRPDCCPPAVLDLLEEYHRRTYFWLELGLQSSHD 153

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +SL FL R H+ +  + A   A+    R+   +I  LP +T        +      VD +
Sbjct: 154 RSLDFLRRGHDYACFLEAYTAAKARGLRVCVHVILGLPGETREDMLATAEEMARLQVDGI 213

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L+ L + +GT   ++++ GD+ +  ++  V L         A  L  
Sbjct: 214 KLHLLHVLRGTRLGELYQQGDINILEQDEYVSLVADVIERLPASALIH 261


>gi|212640263|ref|YP_002316783.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
 gi|212561743|gb|ACJ34798.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
          Length = 501

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 77/218 (35%), Gaps = 16/218 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD          G + +    +  ++   +      +  I F  GT + + P+
Sbjct: 201 CPFSCTFCD---------QGHKAYRSLTMERIKEDLEFFAKIKVKHIDFLDGTFN-LNPK 250

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+       ++++     E  P ++ V+      KA    + LG+QS+  Q+L++
Sbjct: 251 RTIELLN---YLINLNTDWSFHAEIKPENLTVDEINLMAKAKFQTVELGLQSIHPQTLKY 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R +  S     I+    +   +  + I  LP +++  W   L    +     +    L
Sbjct: 308 IKRRNRFSVIEKNINHLLEVGISIVINTIIGLPGESLKDWYESLDYCFNLGKVKILSNVL 367

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSI 242
            I   T      ++       + +       Y   Q I
Sbjct: 368 KILPNTELASQIEEFGFNFSRDELNAVRSTKYFSAQDI 405


>gi|73669262|ref|YP_305277.1| ELP3 family histone acetyltransferase [Methanosarcina barkeri str.
           Fusaro]
 gi|72396424|gb|AAZ70697.1| histone acetyltransferase, ELP3 family [Methanosarcina barkeri str.
           Fusaro]
          Length = 547

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 89/248 (35%), Gaps = 19/248 (7%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P      +   + K G  ++ LGVQS+ +  L  + R H  +E + A  + 
Sbjct: 215 NVGITFETRPDWAGEKHVDEFLKLGGTKVELGVQSVYDFVLTRMQRGHGVAEIVRANQIL 274

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP           ++      +  D+L +Y   + +GT   ++ + 
Sbjct: 275 RDSAFKVGFHMMPHLPGSDSELDLKGFKKLFEDPRFKPDYLKIYPTLVTEGTPLCRLWEA 334

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL-------NYWR 271
           GD    S+  A +L    + I            +I  +  +      NL          R
Sbjct: 335 GDYEALSDEEAAELIADIKEILPKWVRLQRIQRDIPAYQIIAGVRKSNLRQLAEEKLRER 394

Query: 272 YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
            G    I         +   ++      +P+     V         + F++ E  A + L
Sbjct: 395 GGKCHCIRCREVGHTSLKGRKI------NPKDIELTVESYEACGGTEHFIAFEDLAADVL 448

Query: 332 MMGLRLRE 339
           +   RLR 
Sbjct: 449 IGFTRLRF 456


>gi|89072513|ref|ZP_01159085.1| hypothetical protein SKA34_18349 [Photobacterium sp. SKA34]
 gi|89051617|gb|EAR57070.1| hypothetical protein SKA34_18349 [Photobacterium sp. SKA34]
          Length = 312

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+    V  +      F+      ++   ++   +     +F   
Sbjct: 33  CPNRDGTIGRGGCTFCN----VASFADENTQFLPIQQQLIERADEIHRAKR-YLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  + +   K   +   V + +   P  V     Q        G      L
Sbjct: 88  TSTYAEVQTLKKMYEEALKTADI---VGLCVGTRPDCVPDAVLQLLSDYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  E++L+ + R H+ +        AR +  ++   LI  LP  T       + + +
Sbjct: 145 GLQTANEKTLKRINRGHDFAFYATITQRARALGIKVCTHLIVGLPGDTKQDNLDTISKVV 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           S  VD + L+ L I +G+   +  K   L   S     ++ +      +   +  + +S 
Sbjct: 205 SVGVDGIKLHPLHIVEGSKMGQAFKAERLDPISLEEYTNIASEMI-RLTPADVIYHRVSA 263

Query: 256 HSF 258
            + 
Sbjct: 264 AAR 266


>gi|150401715|ref|YP_001325481.1| putative radical SAM protein [Methanococcus aeolicus Nankai-3]
 gi|150014418|gb|ABR56869.1| conserved hypothetical radical SAM protein [Methanococcus aeolicus
           Nankai-3]
          Length = 341

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 83/251 (33%), Gaps = 21/251 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQNI 89
           C +C      R       N   S   +++   +    + +    I+F   T +  +   +
Sbjct: 77  CIFC--PKMGRDIVPPYCNLKYSLKEQIETQLKHHKIKGLKKFYIYFYPATNTYGDLDKL 134

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
             + D       V   + +++   P  +    ++  + Y K G    I LG+Q++ +++L
Sbjct: 135 KELWDFALSYKDV---IGLSLGTRPDCLNGGVLDILEEYVKQGKEIWIDLGIQTMNQKTL 191

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +L R H   +   AI   +     +   +I  LP +                +D L +Y
Sbjct: 192 DYLNRGHTVEDTENAIKNCKKRNIFVCGHIILGLPNEGWKNMMDTAYILGDLEIDALKIY 251

Query: 206 QLTIEKGTLFYKMHKDGDLV----------LPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            L + K T   +++  G             +         Y + Q I          IS 
Sbjct: 252 PLLVLKNTELEQLYWKGKYRTLDKQQYVKLVCDFLERSSPYTIIQRILKDRAPKNIVISP 311

Query: 256 HSFLGAESLHN 266
              +G   L N
Sbjct: 312 KWNIGRLPLLN 322


>gi|282859315|ref|ZP_06268427.1| radical SAM domain protein [Prevotella bivia JCVIHMP010]
 gi|282587895|gb|EFB93088.1| radical SAM domain protein [Prevotella bivia JCVIHMP010]
          Length = 300

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 14/220 (6%)

Query: 32  CPYCD---FN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C YCD   FN S+    K      ++                     +F   T +    Q
Sbjct: 44  CIYCDNRTFNPSYCSDDKNSVTRQLEEGKRFFSGKYPAMK----YLAYFQAYTNTYGSVQ 99

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVNRISLGVQSLEEQS 144
           ++  + D   +   V   V + I   P  V            K     +  GV+S  +++
Sbjct: 100 HLMKLYDEALQVENV---VGLVIGTRPDCVSDELLDYFTQLNKRTFLLVEYGVESCNDKT 156

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R H+ + +   I        R    +I  LP +  T+   +     S  +  L +
Sbjct: 157 LALINRGHDFACSRRMIERTAERGIRTGAHIILGLPGEDRTESIRQAPIISSLPLTTLKI 216

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +Q+ I +GT   KM+ +    L + +  ++L     ++  
Sbjct: 217 HQMQIIRGTKLAKMYNENPFHLYTVDEYIELIADYIALLR 256


>gi|332157937|ref|YP_004423216.1| hypothetical protein PNA2_0294 [Pyrococcus sp. NA2]
 gi|331033400|gb|AEC51212.1| hypothetical protein PNA2_0294 [Pyrococcus sp. NA2]
          Length = 423

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-LIEP 86
           C   C YC        Y  G     +     +++ R++   R I+   F  G+P  +++ 
Sbjct: 173 CPFGCYYC-----QTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKV 227

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEE 142
           + +  +L  +         +       E  P  V     +         R+++G QS ++
Sbjct: 228 EKVEALLKALQPLRREGRRLFYGTFPSEVRPDFVTRETVELLIDYTDTRRLAIGAQSGDD 287

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
             L+ + R H     + A+ LA         D I  LP +T         L + +     
Sbjct: 288 AMLKAMHRVHKVEHVVNAVELALEYGLEPVVDFIVGLPNETPESQRKSIELMKWIIRKGG 347

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  +      GT + +        L  E          +           EIS
Sbjct: 348 KVRAHYFMPLPGTPWAR---CKPSPLSEEMKKFLGRMAAKGYIEGSWGVQIEIS 398


>gi|213410132|ref|XP_002175836.1| elongator complex, histone acetyltransferase subunit Elp3
           [Schizosaccharomyces japonicus yFS275]
 gi|212003883|gb|EEB09543.1| elongator complex, histone acetyltransferase subunit Elp3
           [Schizosaccharomyces japonicus yFS275]
          Length = 544

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 119/362 (32%), Gaps = 55/362 (15%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +R 
Sbjct: 96  CPHIAMTGNVCVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIEQLRS 154

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIA------------KNWTVSSNVE----- 107
           L  P         GGT   +        +  +             +    S   E     
Sbjct: 155 LGHPVDKVEYIIMGGTFMSLPQDYRHKFIANLHNALSGATTEDLDEAVRFSEQSETKCVG 214

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA++ 
Sbjct: 215 ITIETRPDYCWDQHLDEMLRYGCTRLEVGVQSVYEDVARDTNRGHTVKAVCETFQLAKDA 274

Query: 168 FPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +      E     ++  D L LY   + +GT  Y++ K G  
Sbjct: 275 GYKVVTHMMPDLPNVGMERDIFQFQEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTGRY 334

Query: 225 VLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
              + N  VDL     ++    +       +I            NL           G  
Sbjct: 335 KNYTPNALVDLIARILALVPPWTRIYRIQRDIPMPLVTSGVEKGNLRELSLSRMRDFG-- 392

Query: 282 AHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
             +   + +  V +    H   PE  ++++R++  A    E FLS E    + L+  LRL
Sbjct: 393 -TTCRDIRTREVGMQEVHHKIKPEQ-VELLRRDYTANGGWETFLSYEDPTQDILIGLLRL 450

Query: 338 RE 339
           R+
Sbjct: 451 RK 452


>gi|290998209|ref|XP_002681673.1| histone acetyltransferase [Naegleria gruberi]
 gi|284095298|gb|EFC48929.1| histone acetyltransferase [Naegleria gruberi]
          Length = 556

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 131/363 (36%), Gaps = 57/363 (15%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+    +  +++
Sbjct: 102 CPHIAMTGNVCLYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQT-RNRIDQLKR 160

Query: 65  LTGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVS-------------SNVE 107
           L            GGT   +E     + I  + D ++ + + S               + 
Sbjct: 161 LGHDCDKVEFIIMGGTFMSLEKEYRDEFIRNLHDALSGHTSSSVEEAIRYSEQSKQKCIG 220

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H  +    +  LA++ 
Sbjct: 221 ITIETRPDYCLKPHISNLLEYGCTRLEIGVQSIYEDIARDTNRGHTVASVKRSFTLAKDQ 280

Query: 168 FPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +  +   E     ++  D L LY   + +GT  Y++ K G  
Sbjct: 281 GYKIVAHMMPDLPNSDMERDILGFIEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTGQY 340

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
              S +  VDL     S+        Y I          S +   +L  L   R  D +G
Sbjct: 341 KNYSPDSLVDLVAKIMSLVPPWT-RVYRIQRDIPMPLVTSGVEKGNLRELALARMKD-LG 398

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           +        +VG   +   I       ++++R++  A    E FL+ E  A + L+  LR
Sbjct: 399 LKCRDVRTREVGIQSIHTKIIPDE---VELIRRDYCAQDGWETFLAYEDAAQDILIGLLR 455

Query: 337 LRE 339
           LR+
Sbjct: 456 LRK 458


>gi|157867095|ref|XP_001682102.1| histone acethyltransferase-like protein [Leishmania major]
 gi|68125554|emb|CAJ03454.1| histone acetyltransferase-like protein [Leishmania major strain
           Friedlin]
          Length = 763

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 3/140 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P ++        R+ G  R+ LGVQ  ++  L  + R     +   AI L +
Sbjct: 316 IGVTLETRPDTINPEMLVELRRFGCTRVQLGVQHTDDGILTLVNRQSTREDTANAIKLLK 375

Query: 166 NIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP  +         ++  +     D   +Y       ++  + +KDG
Sbjct: 376 DSCFKVDIHLMPDLPGASPTVDKAMFDDVLDSPYLQADQWKIYPCQTTPFSVIEQWYKDG 435

Query: 223 DLVLPSENVAVDLYNLTQSI 242
                     +D+    ++ 
Sbjct: 436 KYTPYGLENLIDVLLYAKAR 455


>gi|147669231|ref|YP_001214049.1| ELP3 family histone acetyltransferase [Dehalococcoides sp. BAV1]
 gi|146270179|gb|ABQ17171.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. BAV1]
          Length = 459

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 78/249 (31%), Gaps = 37/249 (14%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-----------GPRSISSIF 75
           C  KC YC  F +  + Y       +++   E Q  +Q+                +  I 
Sbjct: 23  CPGKCIYCPTFAATPQSYTPESPAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELII 82

Query: 76  FGGGTPSLIEPQ---NIALILDGIAKNWTV----------------SSNVEITIEANPSS 116
            GG   + +          I D       V                   V + IE  P  
Sbjct: 83  MGG---TFLSADITYQYGFIKDCYDALNGVVAGSLEEAKTINETAQHRCVGLCIETRPDI 139

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                 Q     G  R+ LGVQ L++   + + R H  ++   A  L R    ++ +  +
Sbjct: 140 CGKAEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADVAEATCLLREYGLKVHYHWM 199

Query: 177 YALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             LP  +  +       +     +  D L LY   + +GT+  +  K+G           
Sbjct: 200 PGLPGSSPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKEGRYTPYPNGTMT 259

Query: 234 DLYNLTQSI 242
            L    +++
Sbjct: 260 GLIADIKAL 268


>gi|282850281|ref|ZP_06259660.1| putative radical SAM protein [Veillonella parvula ATCC 17745]
 gi|282579774|gb|EFB85178.1| putative radical SAM protein [Veillonella parvula ATCC 17745]
          Length = 321

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 16/211 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +   + 
Sbjct: 48  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLNLDDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQ 143
              ++       +   V I I   P  +     +       +R      I LG+Q++   
Sbjct: 105 KSYIEQGC----IDEAVGIAIATRPDCIADEYLEILADIR-DRFHKDIYIELGLQTVNYD 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   +  VD + 
Sbjct: 160 TLEKINRGHDLAQFIDAVLRIKRYGFNITTHMIVNLPWDTMKDTIEGARILSALGVDQVK 219

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+ L I K TL  K +++G   L S     D
Sbjct: 220 LHALYIVKNTLMAKWYQEGQFTLISAEEYAD 250


>gi|238789736|ref|ZP_04633518.1| hypothetical protein yfred0001_28850 [Yersinia frederiksenii ATCC
           33641]
 gi|238722095|gb|EEQ13753.1| hypothetical protein yfred0001_28850 [Yersinia frederiksenii ATCC
           33641]
          Length = 309

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 85/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     V  +   ++   QS   ++    + T        +F   T +      +  
Sbjct: 45  CTFC----QVASF-ADEQMQQQSIAQQLAAQAKKTNRAKRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAVMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L++ ++  VD L L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDQAQGMETLEKVVATGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  L  E   V    + +   +    H   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPELALEEYVVTAGEMIRHTPADIVYHR--ISASAR 266


>gi|156103347|ref|XP_001617366.1| histone acetyltransferase [Plasmodium vivax SaI-1]
 gi|148806240|gb|EDL47639.1| histone acetyltransferase, putative [Plasmodium vivax]
          Length = 1075

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-----------IEANPSSVEVNNFQGYRKAGVNRIS 134
             NI  +L    + +++    EI            +E  P  +        R  G  R+ 
Sbjct: 444 AANIYPLLKNRREKFSLEKEQEINETSNCRIIGLTLETRPDQINKEELIRLRSYGCTRVQ 503

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q  ++  L+ + R     + I AI+L +    ++   L+  LP   + +     +  
Sbjct: 504 LGIQHTDDFILKKVNRQCTLQDCIRAIYLLKENGFKVDIHLMPDLPYSDVKKDVSMFKYV 563

Query: 195 L---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           L       D   +Y   I   T   K +   +     E   
Sbjct: 564 LSSTDLQADQWKIYPCEITPFTRIEKWYNRNEFKPYFETDK 604


>gi|55377799|ref|YP_135649.1| hypothetical protein rrnAC0974 [Haloarcula marismortui ATCC 43049]
 gi|55230524|gb|AAV45943.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 551

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 81/236 (34%), Gaps = 13/236 (5%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P     + F        +      + D IA+
Sbjct: 164 TMTARSHDYQEWFVKRALEAMNDFDVDGEPTPAEDVSFAE------DDYEFRYLEDVIAE 217

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T    NV  T E  P   +          G  ++ +GVQ+  E+  R + R H    +
Sbjct: 218 NETADVRNVATTFETKPDWCDPEQIDRMLDLGATKVEVGVQTTFERINREMHRGHGVQAS 277

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTL 214
           I A    R+   ++ F ++   P  +      + +R      +  D+L +Y   I +GT+
Sbjct: 278 IDANRRLRDSGFKVGFHMMPGQPGMSKEMCLEDFRRIFEQTDWRPDYLKIYPTLIVEGTV 337

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHNL 267
            Y   +  +      + A +L    + +    +       +I      G     NL
Sbjct: 338 TYDWWRKDEFDPLDNDEAAELVAEIKDMIPRYTRLQRVQRDIPADFIEGGVWKSNL 393


>gi|258514994|ref|YP_003191216.1| hypothetical protein Dtox_1736 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257778699|gb|ACV62593.1| conserved hypothetical protein [Desulfotomaculum acetoxidans DSM
           771]
          Length = 317

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 87/248 (35%), Gaps = 29/248 (11%)

Query: 23  VHWPF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSI 71
           V+ P  C  +        C +CD          G E    +     ++   +     R  
Sbjct: 28  VNLPGTCPNRDGKVGRGGCIFCD------EEGAGFECLPGTLTVQEQIAENKAFFQQRFN 81

Query: 72  SS---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
           +     +F   T + +    + +  + +      +  V I+I   P  +  +  Q  +  
Sbjct: 82  AHKFIAYFQAFTNTYMP---LNVFKEKMRAACQDADIVGISISTRPDCINDSYLQYLQDL 138

Query: 129 GVNR------ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
              R      I LG+Q++   +L+ + R H  +E + A+   +     +   LI  LP  
Sbjct: 139 RQERGRLNINIELGLQTVNYHTLKKINRGHTLAEYVDAVCRIKKHGFDVCTHLILNLPWD 198

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +T      +   +  VD++ L+ L I K T+  +M+++ +  + +    +         
Sbjct: 199 NLTDVVENAKLVSALKVDYVKLHSLYIVKNTVLGEMYRNHEFSVITLEDYIHRVVAFLEY 258

Query: 243 TSAHGLHA 250
            +   +  
Sbjct: 259 LAPDVVVQ 266


>gi|167400644|ref|ZP_02306153.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167050012|gb|EDR61420.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
          Length = 311

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 9/209 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F           +    +    +Q  +     R ++  +F   T +      +  +  
Sbjct: 45  CTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLA--YFQAYTSTY---AEVNALAA 99

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRFLGR 150
              +    +  V + +   P  V           ++ G      LG+Q+  +++L+ + R
Sbjct: 100 MYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINR 159

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L I 
Sbjct: 160 GHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIV 219

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +G+   K  + G L   +  +A++ Y LT
Sbjct: 220 EGSTMAKAWRAGRLTALALALALEDYVLT 248


>gi|288800021|ref|ZP_06405480.1| radical SAM protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333269|gb|EFC71748.1| radical SAM protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 305

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 7/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    Y   +++  +      ++  +          +F   T +      +  
Sbjct: 45  CTYCDNRTFNPSYCHKRDSVTEQLEAGKRFFGKKYPDMK-YLAYFQAYTNTYSPTSKLRT 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           + +   +   VS  V + I   P  V        ++        +  G+++   ++L  +
Sbjct: 104 MYE---EALAVSDVVGLVIGTRPDCVSDELLDYLQELNKKTFVLVEYGIETTNNKTLERI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+   ++ AI   +         +I  LP + + +   + +      +D L ++Q+ 
Sbjct: 161 NRGHSFECSVDAIKRTKERGILTGGHIILGLPGEDLQESIQQAKIISLLPLDILKIHQMQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           I +GT   K   +    L S +  ++L         
Sbjct: 221 IIRGTKLAKEWNEEPFHLYSLDEYIELIAQYIQYLR 256


>gi|149241028|ref|XP_001526261.1| hypothetical protein LELG_02819 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450384|gb|EDK44640.1| hypothetical protein LELG_02819 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 549

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 117/378 (30%), Gaps = 65/378 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   R +
Sbjct: 100 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQLRKL 159

Query: 72  SSIF------FGGGTPSLIEPQN----IALILDGIAKNW--TVSSNVE-----------I 108
                       GGT   +        I  + + +       +   +E           I
Sbjct: 160 GHSIDKVEYIIMGGTFMSLPIDYRENFITQLHNALTGFNGKNIDEAIEFSQQSQTKCVGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++  
Sbjct: 220 TIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++       
Sbjct: 280 YKVVSHMMPDLPNVGMERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYEL---WKQG 336

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
           L     A  L +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 337 LYKSYNANALIDLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKDL- 395

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
                  +  +    R     E H +     ++++R++ +A    E FLS E    + L+
Sbjct: 396 ------GTLCRDVRTREVGIQEVHHKVVPDQVELIRRDYYANGGWETFLSYEDPKQDILI 449

Query: 333 MGLRLREGISVKDWEMLA 350
             LRLR+      +    
Sbjct: 450 GLLRLRKASKKYTYRKEF 467


>gi|294791928|ref|ZP_06757076.1| radical SAM protein family [Veillonella sp. 6_1_27]
 gi|294457158|gb|EFG25520.1| radical SAM protein family [Veillonella sp. 6_1_27]
          Length = 321

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 16/211 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +   + 
Sbjct: 48  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLNLDDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQ 143
              ++       +   V I I   P  +     +       +R      I LG+Q++   
Sbjct: 105 KSYIEQGC----IDEAVGIAIATRPDCIADEYLEILADIR-DRFHKDIYIELGLQTVNYD 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   +  VD + 
Sbjct: 160 TLEKINRGHDLAQFIDAVLRIKRYGFNITTHMIVNLPWDTMKDTIEGARILSALGVDQVK 219

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+ L I K TL  K +++G   L S     D
Sbjct: 220 LHALYIVKNTLMAKWYQEGQFTLISAEEYAD 250


>gi|57234575|ref|YP_181354.1| ELP3 family histone acetyltransferase [Dehalococcoides ethenogenes
           195]
 gi|57225023|gb|AAW40080.1| histone acetyltransferase, ELP3 family [Dehalococcoides ethenogenes
           195]
          Length = 459

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 79/246 (32%), Gaps = 31/246 (12%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-----------GPRSISSIF 75
           C  KC YC  F +  + Y       +++   E Q  RQ+                +  I 
Sbjct: 23  CPGKCVYCPTFEATPQSYTPESPAVLRAKSCEYQAYRQVALRLRIIQDMGHPTDKVELII 82

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTV----------------SSNVEITIEANPSSVEV 119
            GG   +         I D       V                   V + IE  P     
Sbjct: 83  MGGTFLAADTAYQYGFIKDCYDALNGVVASSLEEAKAINETAQHRCVGLCIETRPDICGE 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
              Q     G  R+ LGVQ L++   + + R H  ++   +  L R    ++ +  +  L
Sbjct: 143 AEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHTVADVAESTRLLREYGLKVHYHWMPGL 202

Query: 180 PKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           P  +  +       +     +  D L LY   + +GT+  +  K+G       ++   L 
Sbjct: 203 PGSSPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEEWWKEGRYTPYPSDIMTGLI 262

Query: 237 NLTQSI 242
              +++
Sbjct: 263 ADIKAL 268


>gi|282877772|ref|ZP_06286585.1| radical SAM protein, TIGR01212 family [Prevotella buccalis ATCC
           35310]
 gi|281300088|gb|EFA92444.1| radical SAM protein, TIGR01212 family [Prevotella buccalis ATCC
           35310]
          Length = 313

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 72/221 (32%), Gaps = 15/221 (6%)

Query: 32  CPYCD---FN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C YCD   FN S+    K  QE           +  +          +F   T +    +
Sbjct: 43  CTYCDNRAFNPSYCDPRKTIQEQ----LEDGKAFFSRKYHGMK-YLAYFQAYTNTYASLE 97

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQS 144
           ++  + +   +   V   V I I   P  +     +  +   K     I  GV++    +
Sbjct: 98  SLKRMYE---EALLVEDVVGIVIGTRPDCMSDQLLDYLEQLNKHTFLLIEYGVETTNNDT 154

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R H    + A I             +I  LP ++      +     S  +D L +
Sbjct: 155 LQRIHRGHTFECSKATIEKTHGRGILTGAHVIIGLPGESTEDSIGQAPIISSLPIDVLKI 214

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +Q+ + + T   K + +      + +  +D+          
Sbjct: 215 HQMQVIRHTQLAKQYAEAPFHTYTVDQYIDVIIRYIERLRN 255


>gi|226324962|ref|ZP_03800480.1| hypothetical protein COPCOM_02754 [Coprococcus comes ATCC 27758]
 gi|225206310|gb|EEG88664.1| hypothetical protein COPCOM_02754 [Coprococcus comes ATCC 27758]
          Length = 319

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 79/232 (34%), Gaps = 20/232 (8%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +     C +C   +      +     +   LT  + M       +    +F   T +
Sbjct: 34  CPNRLDGDGCAFCA-GAGTGFEAMSAAVSVTEQLTRTRQMITRKYHANKYIAYFQNYTNT 92

Query: 83  LIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVN-RISLG 136
            + P      +++       +   VEI++   P  V        R      G+   + LG
Sbjct: 93  FLPPDRFRSYLMEATR----IPGVVEISVSTRPDCVSAEYLDIMRDIRAMTGIQMNVELG 148

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +Q+    +L+ + R H  +E I A+   +      +   +I  LP  T    +   +   
Sbjct: 149 LQTANYHTLQMIDRGHGLAEFIDAVLRIKRYTGISICTHVILNLPGDTAADAKETARILT 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  VD + L+ L I + T     +++G + + S+      +    +      
Sbjct: 209 ALGVDIVKLHSLYIARNTRLCDWYENGKITVCSKEE---YFERVITFLEQIP 257


>gi|198276292|ref|ZP_03208823.1| hypothetical protein BACPLE_02484 [Bacteroides plebeius DSM 17135]
 gi|198270734|gb|EDY95004.1| hypothetical protein BACPLE_02484 [Bacteroides plebeius DSM 17135]
          Length = 314

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 23  VHWPF------------CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +H+PF            C  +        C YC+  +    Y    ++  Q      ++ 
Sbjct: 16  LHFPFKVQKISLNVGFTCPNRDGVKGYGGCTYCNNQTFNPAYCRTDKSVTQQLEEGKEFF 75

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            +          +F   T +      +  +     +   V   V + I   P  +     
Sbjct: 76  ARKYPEMKF-LAYFQAYTNTY---AELDKLRQMYEEALRVEGVVGLVIGTRPDCMPEELL 131

Query: 123 QGYRKAG---VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
               K        +  G++S +  +L+ + R H     + A+        R+   +I  L
Sbjct: 132 DYLEKLNKRTFLLVEYGIESTDNHTLQRINRGHTFECTVDAVKRTAERGIRVGGHVILGL 191

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +       + ++     +  L ++QL + +GT     ++          V   + +L 
Sbjct: 192 PGENHEAIIRQARQVSELPLTTLKMHQLQLVRGTRMAHEYELCPEDFHLYEVDEYI-DLV 250

Query: 240 QSITS 244
                
Sbjct: 251 IDYLE 255


>gi|47222468|emb|CAG12988.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 650

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 77/233 (33%), Gaps = 38/233 (16%)

Query: 24  HWPFCVKKCPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           H  F    C YC      DF            + +R  +   + ++Q+     + ++QL 
Sbjct: 95  HISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRV-EQLKQLG 153

Query: 67  GPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVEIT 109
                      GGT   +        I  + D                   + +  V IT
Sbjct: 154 HSVDKVEFIVMGGTFMSLPEDYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGIT 213

Query: 110 IEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           IE  P      +       G  R+ +GVQS+ E   R   R H       + HL+++   
Sbjct: 214 IETRPDYCLKRHLGDMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLSKDAGF 273

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
           ++   ++  LP   M +   +         +  D L LY   + +GT  Y++ 
Sbjct: 274 KVVAHMMPDLPNMGMERDIEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELW 326


>gi|289432498|ref|YP_003462371.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. GT]
 gi|288946218|gb|ADC73915.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. GT]
          Length = 459

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 78/249 (31%), Gaps = 37/249 (14%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-----------GPRSISSIF 75
           C  KC YC  F +  + Y       +++   E Q  +Q+                +  I 
Sbjct: 23  CPGKCIYCPTFAATPQSYTPESPAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELII 82

Query: 76  FGGGTPSLIEPQ---NIALILDGIAKNWTV----------------SSNVEITIEANPSS 116
            GG   + +          I D       V                   V + IE  P  
Sbjct: 83  MGG---TFLSADITYQYGFIKDCYDALNGVVAGSLEEAKTINETAQHRCVGLCIETRPDI 139

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                 Q     G  R+ LGVQ L++   + + R H  ++   A  L R    ++ +  +
Sbjct: 140 CGKAEIQRMIDFGTTRVELGVQMLDDDIYKMVERGHTVADVAEATCLLREYGLKVHYHWM 199

Query: 177 YALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             LP  +  +       +     +  D L LY   + +GT+  +  K+G           
Sbjct: 200 PGLPGSSPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKEGRYTPYPNGTMT 259

Query: 234 DLYNLTQSI 242
            L    +++
Sbjct: 260 GLIADIKAL 268


>gi|294673385|ref|YP_003574001.1| Fe-S oxidoreductase, TIGR01212 family [Prevotella ruminicola 23]
 gi|294472511|gb|ADE81900.1| putative Fe-S oxidoreductase, TIGR01212 family [Prevotella
           ruminicola 23]
          Length = 313

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 15/223 (6%)

Query: 32  CPYCD---FN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C YCD   FN S+ +R        + + L E +       P      +F   T +    +
Sbjct: 49  CIYCDNRTFNPSYCQRRLS-----VSAQLAEGKQFFAHKYPDMKYLAYFQAFTNTYAPIE 103

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQS 144
            +  + +   +   V   V I I   P  V         +        +  G++S    +
Sbjct: 104 QLKALYE---EALAVEDIVGIVIGTRPDCVSDELLDYLAELNQRTFVLVEYGLESCNAAT 160

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R H   ++++A+             +I  LP +   +   +        +D L +
Sbjct: 161 LQHINRGHTFEQSVSALERTHQRGLLTGAHIILGLPGEDAAESLRQAPILSQLPIDILKI 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +Q+ I +GT     ++     + S +  ++L            
Sbjct: 221 HQMQIIRGTRLADEYEREPFHIYSVDEYIELIAQYIQRLRPDM 263


>gi|289191984|ref|YP_003457925.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288938434|gb|ADC69189.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 426

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 20/204 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGG-- 79
           C   C +C     F  +VR         I++    ++ M +  L   R I+   FG G  
Sbjct: 183 CPYGCYFCQTPRIFGKNVRHRS------IENICKYVEIMAERNLKDIRFITPNAFGYGSK 236

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAGVNR-ISL 135
               +    +  +L+ I +    +  +       E  P  V         K   N+ + +
Sbjct: 237 DGKTLNIDKVEKLLENIREILGNNGRIFFGTFPSEVRPEHVNDETVDLILKYADNKSLVV 296

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G QS  ++ L    R H   +   A+  A      +S D I+ LP +T    E  ++   
Sbjct: 297 GAQSGSQRILDLCHRGHTVEDIYNAVTTAIKKGISVSLDFIFGLPGETEEDVEKTIKVMK 356

Query: 196 SYAVDHLSLYQLTIE--KGTLFYK 217
                   ++  T      T F K
Sbjct: 357 DLIKMGAKIHAHTFMPLPQTPFAK 380


>gi|330977077|gb|EGH77035.1| HemN family oxidoreductase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 109

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
              +     + P+ +L     +       + L  ++   EFLM  LRL  G+    +   
Sbjct: 6   GRIMRTWKTRLPKDYL---NPDKPFQAGSKLLPLDELPFEFLMNALRLTNGVDAALFRER 62

Query: 350 AGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
            G +LD   E  R  +++G + +   +RL  T +G   L+ ++    +
Sbjct: 63  TGLSLDSLAEARRQAEQKGLLHQ-DPTRLIATPQGQLFLNDLLQYFLI 109


>gi|290559169|gb|EFD92528.1| histone acetyltransferase, ELP3 family [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 525

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 80/242 (33%), Gaps = 40/242 (16%)

Query: 28  CVK-KCPYCD----FN---SHVRRYKVGQENFIQSFLTEMQWMRQL-------TGPRSIS 72
           C    C  C     FN   S+       +   + ++    Q   +L         P+ I 
Sbjct: 93  CPHGTCISCPGGTKFNTPQSYTGFEPAARRALMNNYDPYKQVTARLKHYLFMGYNPQKIE 152

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWT------VSSNVE---------------ITIE 111
            I  GG   + +  + +   +  + K         V  N+E                  E
Sbjct: 153 IIAIGGTFTT-LPKEYVNEYVTAVYKAMNEFYGDKVEGNLEEQKKFNETAKIRCVAFAAE 211

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P        +     G+ R+ +GVQS+ ++ L    R H  S+ I A    +N   ++
Sbjct: 212 TKPERCANEEIERMLNFGITRVEMGVQSIYDEVLLKNNRGHTISDVIDASRRLKNYGYKV 271

Query: 172 SFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            + ++  L      +    + +     ++  D + LY   + +GT  Y+M K G+     
Sbjct: 272 DYHIMLNLAFSDKDKDRETINQIYNNDNFKPDAIKLYPTLVIRGTGLYEMWKRGNYKPYP 331

Query: 229 EN 230
             
Sbjct: 332 IE 333


>gi|297733621|emb|CBI14868.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 123/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 7   CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RSRIDQLKR 65

Query: 65  LTGPRSISSIFFGGGTPSLIEPQ-------NIALILDG----------IAKNWTVSSNVE 107
           L            GGT   +  +       N+   L G               +    + 
Sbjct: 66  LGHSVDKVEFILMGGTFMSLPAEYRDYFTRNLHDALSGHTSANVEEAVAYSEHSAIKCIG 125

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 126 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 185

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 186 GFKVVAHMMPDLPNVGVERDLESFREFFESPMFRADGLKIYPTLVIRGTGLYELWKTGRY 245

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   ++   I +        Y +          S +   +L  L   R  D 
Sbjct: 246 RNYPPEQLV---DIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDD- 301

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        + G   +   I+  PE  +++VR++  A    E FLS E    + L+  
Sbjct: 302 LGLKCRDVRTREAGIQDIHHKIK--PEE-VELVRRDYTANEGWETFLSYEDIRQDILVGL 358

Query: 335 LRLRE 339
           LRLR+
Sbjct: 359 LRLRK 363


>gi|221125926|ref|XP_002155361.1| PREDICTED: similar to GL15175, partial [Hydra magnipapillata]
          Length = 545

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 120/366 (32%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+    ++ ++ 
Sbjct: 97  CPHISMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHR-IEQLKS 155

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   ++ +     I  + D                   + +  + 
Sbjct: 156 LGHSVDKVEFIVMGGTFMALDEEYRDYFIRNLHDALSGHTSNSVEEAVRYSEKSKTKCIG 215

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 216 ITIETRPDYCLKRHISSMLLYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFQLGKDS 275

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 276 GYKVIAHMMPDLPNVDMERDIEQFVEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 335

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                   V   +L   I +        Y +          S +   +L  L   R  D+
Sbjct: 336 KSYPPGALV---DLIARILALVPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALARMKDF 392

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R          +I K+   + ++++R++  A    E FLS E    + L+ 
Sbjct: 393 -----GTECRDVRTREVGIQAIHKNIRPYEIELIRRDYVANQGWETFLSYEDPDQDILVG 447

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 448 LLRLRK 453


>gi|71030146|ref|XP_764715.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68351671|gb|EAN32432.1| hypothetical protein, conserved [Theileria parva]
          Length = 884

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 87/253 (34%), Gaps = 39/253 (15%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-----------SISSIF 75
           C + C YC +     R Y   +   +++   +   ++Q                 I  I 
Sbjct: 290 CSENCYYCPNEPGQPRSYLSTEPAVLRANQNDFDAVKQFYDRANTLYKNGHVVDKIEIIV 349

Query: 76  FGG---GTPSLIEPQNIALI----------LDGIAKNWTVSSN-----------VEITIE 111
            GG   G P   + + I  +          L    +  T+              + +T+E
Sbjct: 350 LGGTWSGYPRSYQEEFIRDLFYAANVYPENLQKCRERGTIDYEQTLNENSKCRIIGLTLE 409

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P  +     +  R+ G  R+ LG+Q   +  L ++ R H   ++I AI+L +    ++
Sbjct: 410 TRPDRINPTEIELLRRFGCTRVQLGIQHTNDSILEYVNRGHTTQDSIKAIYLLKENCFKV 469

Query: 172 SFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
              ++  LP     +     +  L      VD   +Y   +   +   K HK+G  +   
Sbjct: 470 DIHIMPDLPSSNPQEDLEMFKYILSSKDLQVDQWKIYPCEVTPFSEIEKWHKEGKYIPYF 529

Query: 229 ENVAVDLYNLTQS 241
           +  +  L NL   
Sbjct: 530 DVDSNLLTNLIIR 542


>gi|150021440|ref|YP_001306794.1| putative radical SAM protein [Thermosipho melanesiensis BI429]
 gi|149793961|gb|ABR31409.1| conserved hypothetical radical SAM protein [Thermosipho
           melanesiensis BI429]
          Length = 300

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 81/249 (32%), Gaps = 30/249 (12%)

Query: 28  CVKK------CPYCD-----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-- 74
           C  +      C +CD     F +                 ++++ +++    R +     
Sbjct: 24  CPNRENGKPGCLFCDETGSGFTTITGLN----------IKSQIEELKKRYKSRGVKKFIA 73

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +         +L  +         V+I+I   P  +         +   N   
Sbjct: 74  YFQNYTNTYAPID----VLKKVYSEAIDKDIVQISISTRPDCISDEILDLLEELKNNIDI 129

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I +G+Q+    +L  + R H  SE I A    +N    +   +I   P   +       
Sbjct: 130 SIEMGLQTANYHTLVKMNRGHTLSEFINAALKIKNRGFELISHVILNFPDDNLLDVIETA 189

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +      VD + ++ L I + T+  K++K+  L + S    ++         S       
Sbjct: 190 KILSVLNVDGVKIHSLYIVENTILGKLYKESKLKIGSLENYIERVVRFLEFLSPKITIHR 249

Query: 252 EISNHSFLG 260
            +++    G
Sbjct: 250 LVADPPKTG 258


>gi|94270734|ref|ZP_01291811.1| Cobalamin B12-binding:Radical SAM [delta proteobacterium MLMS-1]
 gi|93450685|gb|EAT01775.1| Cobalamin B12-binding:Radical SAM [delta proteobacterium MLMS-1]
          Length = 497

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC F     R    +   + + L E++      G R I  I       +L    
Sbjct: 232 CNRRCLYC-FQIDKSRQSGIRYRSVDNVLAEIRACLA-EGYREIKFIDD-----TL--AD 282

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    L+   +      +      A  + V+    + +++AG   I  GV+S  ++ L  
Sbjct: 283 DYERALELARRIKQEGLDFTWFASACVNQVDEQLLRAFKEAGCWAILFGVESGVQKDLNT 342

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +    ++   A+  A+ +   +    I+ +P QT       +  AL    D  + + L
Sbjct: 343 IRKGITIAQIRKAVAAAKKVGITVYTPFIFGIPGQTYEDGLKSIDFALELDPDIANFHAL 402

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 403 TPFPGTELW 411


>gi|67523677|ref|XP_659898.1| hypothetical protein AN2294.2 [Aspergillus nidulans FGSC A4]
 gi|40745249|gb|EAA64405.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259487688|tpe|CBF86551.1| TPA: histone acetyltransferase, putative (AFU_orthologue;
           AFUA_5G06140) [Aspergillus nidulans FGSC A4]
          Length = 574

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 122/385 (31%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   RS+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIRSL 176

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTVSS----------NVEI 108
                       GGT   +  +        +   L G   +    +           V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPAEYRDTFVAQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 237 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLFQFEEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 357 NYTPNALI---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 411

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 412 -FGTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYTANGGWETFLAYEDPKQDILIGLL 469

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+      +     G+   I  E
Sbjct: 470 RLRKCSPTHTFRPEFTGQQTSIIRE 494


>gi|94263046|ref|ZP_01286865.1| Cobalamin B12-binding:Radical SAM [delta proteobacterium MLMS-1]
 gi|93456589|gb|EAT06697.1| Cobalamin B12-binding:Radical SAM [delta proteobacterium MLMS-1]
          Length = 497

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC F     R    +   + + L E++      G R I  I       +L    
Sbjct: 232 CNRRCLYC-FQIDKSRQSGIRYRSVDNVLAEIRACLA-EGYREIKFIDD-----TL--AD 282

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    L+   +      +      A  + V+    + +++AG   I  GV+S  ++ L  
Sbjct: 283 DYERALELARRIKQEGLDFTWFASACVNQVDEQLLRAFKEAGCWAILFGVESGVQKDLNT 342

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +    ++   A+  A+ +   +    I+ +P QT       +  AL    D  + + L
Sbjct: 343 IRKGITIAQIRKAVAAAKKVGITVYTPFIFGIPGQTYEDGLKSIDFALELDPDIANFHAL 402

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 403 TPFPGTELW 411


>gi|238019232|ref|ZP_04599658.1| hypothetical protein VEIDISOL_01096 [Veillonella dispar ATCC 17748]
 gi|237863931|gb|EEP65221.1| hypothetical protein VEIDISOL_01096 [Veillonella dispar ATCC 17748]
          Length = 310

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 16/211 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +   + 
Sbjct: 37  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLGLDDF 93

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQ 143
              ++       +   V I I   P  +             +R      I LG+Q++   
Sbjct: 94  KSYMEQGC----IDEAVGIAIATRPDCIADEYLDILADIR-DRFQKDIYIELGLQTVNYD 148

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   +  VD + 
Sbjct: 149 TLEKINRGHDLAQFIDAVIRIKRYGFNVTTHMIVNLPWDTMKDTIEGARILSALGVDQVK 208

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+ L I K TL  K +++G   L S     D
Sbjct: 209 LHALYIVKNTLMAKWYQEGQFTLISAEEYAD 239


>gi|319956422|ref|YP_004167685.1| hypothetical protein Nitsa_0668 [Nitratifractor salsuginis DSM
           16511]
 gi|319418826|gb|ADV45936.1| conserved hypothetical protein [Nitratifractor salsuginis DSM
           16511]
          Length = 325

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 6/161 (3%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           ++F   T +    + +  + +       V   V ++I     SV     +   +      
Sbjct: 110 VYFQAFTNTYAPFETLRTLYERALAYPGV---VGLSIGTRSDSVTDETLEYLAELSKEYE 166

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I  G+QS+ +++LR + R H+A     AI  A++   ++   LI+ LP +        
Sbjct: 167 IWIEYGIQSIYDETLRRINRGHDALNVEQAIKKAKDKGLKVCGHLIFGLPGEDKQMMLDS 226

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            + A  + +D +  + L + K TL    +K G+    +   
Sbjct: 227 AKAAYDWGIDSVKYHPLYVVKQTLLANEYKRGEFTPITREE 267


>gi|289580552|ref|YP_003479018.1| histone acetyltransferase [Natrialba magadii ATCC 43099]
 gi|289530105|gb|ADD04456.1| histone acetyltransferase, ELP3 family [Natrialba magadii ATCC
           43099]
          Length = 556

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 76/208 (36%), Gaps = 8/208 (3%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P     I F    P   E      + D IA+
Sbjct: 167 TMTARSHDYQEWFVKRALEAMNDYDVDKEPEPAEGISF-AEDP---EEYEFKYLEDVIAE 222

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T    N+  T E  P   +          G  ++ +GVQ+  E+  R + R H A  +
Sbjct: 223 NETGDVRNIGTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGAQAS 282

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTL 214
           I A    R+   ++ F ++   P  +      + +R      +  D+L +Y   I +GT 
Sbjct: 283 IDANQRLRDSAFKVGFHMMPGQPGMSKEMCLEDFRRIFEEEQWKPDYLKIYPTLIVRGTA 342

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            Y     G+      + A DL    + +
Sbjct: 343 TYDWWHKGEYDPLDNDEAADLVAEIKDM 370


>gi|315636581|ref|ZP_07891815.1| radical SAM superfamily protein [Arcobacter butzleri JV22]
 gi|315479090|gb|EFU69789.1| radical SAM superfamily protein [Arcobacter butzleri JV22]
          Length = 320

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 24/207 (11%)

Query: 32  CPYC---DF--------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------ 74
           C +C    F               K+ +  ++++ L +++     T  R  +        
Sbjct: 46  CSFCENDSFSPNLQEKRTKFKLNPKINENPYLENQLKQLEMQFFATKKRLENKFGVKKFI 105

Query: 75  -FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
            +F   T +      +  + +   K  +  + + ++I      +         +   ++ 
Sbjct: 106 VYFQSFTNTYAPFDTLKALYE---KALSFDNVIGLSIGTRTDCMTDEILDFLVEKSKDKE 162

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I  G+QS  +++L  + R    S     I   ++   ++   LIY LP +T       
Sbjct: 163 IWIEYGIQSFFDETLVKINRGDTVSNMKYWIKRTKDRGLKVCGHLIYGLPNETQEMMLET 222

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            ++ L   VD +  + L + K TL   
Sbjct: 223 FKQTLELEVDSIKFHPLYVVKNTLLTN 249


>gi|115641347|ref|XP_001203551.1| PREDICTED: similar to elongation protein 3 homolog, partial
           [Strongylocentrotus purpuratus]
 gi|115658194|ref|XP_796915.2| PREDICTED: similar to elongation protein 3 homolog, partial
           [Strongylocentrotus purpuratus]
          Length = 407

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 119/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   + I
Sbjct: 29  CPHISMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRVDQLKQI 88

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +  +     I  + D ++ +              + +  + I
Sbjct: 89  GHSVDKVEFIVMGGTFMALSEEYRDYFIRNLHDALSGHTSNSVEEAVKFSERSRTKCIGI 148

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     K G  R+ +GVQS+ E   R   R H       +  ++++  
Sbjct: 149 TIETRPDYCLKRHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQMSKDAG 208

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ K G   
Sbjct: 209 FKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYK 268

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +  V   +L   I +        Y +          S +   +L  L   R  D  
Sbjct: 269 SYPPSTLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMRDL- 324

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               G   R           I    + + ++++R++ ++    E FLS E    + L+  
Sbjct: 325 ----GTQCRDVRTREVGIQEIHHKVKPYEVELIRRDYYSSSGWETFLSYEDPEQDILIGL 380

Query: 335 LRLRE 339
           LRLR+
Sbjct: 381 LRLRK 385


>gi|15790500|ref|NP_280324.1| hypothetical protein VNG1510C [Halobacterium sp. NRC-1]
 gi|169236236|ref|YP_001689436.1| protein acetyltransferase [Halobacterium salinarum R1]
 gi|10581002|gb|AAG19804.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727302|emb|CAP14088.1| putative protein acetyltransferase [Halobacterium salinarum R1]
          Length = 549

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 88/268 (32%), Gaps = 23/268 (8%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    ++ A    
Sbjct: 223 NIGTTFETKPDWCDPEQVDRMLDLGATKVEVGVQTTFERVNREMHRGHGVQASVDANRRL 282

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++   P  +      + +R      +  D+L +Y   + + T+ Y M ++
Sbjct: 283 RDAAFKVGFHMMPGQPGMSKEMVLEDFRRLFDDERWKPDYLKIYPTLVVRDTITYDMWRN 342

Query: 222 GDLVLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHN---LNYWRYGDY 275
           GD        A DL    + +    +       +I            N   L   R  + 
Sbjct: 343 GDFEPLHNEEAADLVAEIKDMIPRYTRLQRVQRDIPADFIDAGVWKSNLRQLARQRMAE- 401

Query: 276 IGIGPGAHSRVKVGSH-RVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMG 334
                  H         R A   +  PE+    V         ++F+S E    + L+  
Sbjct: 402 -------HGYTCDCIRCREAGMNDDDPENVSLDVETYAAGGGTEQFISIEDFQQDLLVGF 454

Query: 335 LRLREGISVKDWEMLAGRNLDIECERNL 362
            RLR        E L     D    R L
Sbjct: 455 ARLRFPNEPAR-EELT----DAALLREL 477


>gi|308503801|ref|XP_003114084.1| CRE-ELPC-3 protein [Caenorhabditis remanei]
 gi|308261469|gb|EFP05422.1| CRE-ELPC-3 protein [Caenorhabditis remanei]
          Length = 559

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 20/260 (7%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            + ITIE  P      +       G  R+ +GVQS  E   R   R H         H+A
Sbjct: 225 CIGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMA 284

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   + + +    EL  + ++  D L LY   + +GT  Y++ K 
Sbjct: 285 KDTGYKVVIHMMPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKT 344

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRY 272
           G       +V V   +L  +I S        Y +          S +   +L      + 
Sbjct: 345 GRYQSYPPSVLV---DLIATILSLVPPWTRVYRVQRDIPMPLVSSGVEHGNLREHAMAKM 401

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
            + +G+        +VG   +   +   PE  ++++R++  A    E F+S E    + L
Sbjct: 402 KE-LGLKCRDVRTREVGIQEIHNKVR--PED-VELIRRDYTANGGWETFISYEDPKQDIL 457

Query: 332 MMGLRLREGISVKDWEMLAG 351
           +  LRLR+         L G
Sbjct: 458 IGLLRLRKISDKAHRTELKG 477


>gi|258620899|ref|ZP_05715933.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586287|gb|EEW11002.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 312

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFAN-----EETQQQSIHDQLKDRAGEIKRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +   V+  V + +   P  V     +        G      L
Sbjct: 88  TSTY---AEVQVLKSMYEQALEVADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  + +L+ + R H+ +        AR +  ++   LI  LP +  ++    LQ+ L
Sbjct: 145 GLQTAHDHTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRSENMSTLQQVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 205 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLAVLEQDEYVSIVCEMIRSTPPQIIYHR 260


>gi|237506938|gb|ACQ99220.1| coproporphyrinogen oxidase-related protein [Tragopogon pratensis]
          Length = 111

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 34  YCDFN--------SHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLI 84
           YCDF         +          N+I   + E++  +        + ++FFGGGTPS +
Sbjct: 1   YCDFPILALGSSSTETADDDPRISNYIHILIREIEATQTHFEQHPPLETVFFGGGTPSSV 60

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
            P+ +A +LD +   + +  + EI++E +P + +    +     GVNR+SL
Sbjct: 61  PPRLVAKVLDTLRSKFGLRLDAEISMEMDPGTFDAQKLKDLMGLGVNRVSL 111


>gi|42523462|ref|NP_968842.1| putative Fe-S oxidoreductase [Bdellovibrio bacteriovorus HD100]
 gi|39575668|emb|CAE79835.1| putative Fe-S oxidoreductase [Bdellovibrio bacteriovorus HD100]
          Length = 348

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 80/233 (34%), Gaps = 22/233 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
           C  +        C +CD    V       E+       +++    +   +       I+F
Sbjct: 49  CPNRRGLKGMQTCVFCD----VWGSAANAESLSMELRAQIEKYHGIISNKYNAKAFLIYF 104

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRI 133
              T +  +   +    D       V      T+   P  +  +    +++        +
Sbjct: 105 QAYTNTFTKVSALRNNFDVALSYPWVKG---FTVGTRPDCLSKSVLDLWQEYHEKSFVAV 161

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            LGVQS     L F+ R H A ++IAAI  +A +    +   LI+  P +T  Q     +
Sbjct: 162 ELGVQSFYNDQLEFMRRGHTAEDSIAAINKIASSTTVDLGIHLIFGSPTETDEQIIETAK 221

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 + ++ L+ L + K T   +M+  G+ +   ++       L     S 
Sbjct: 222 ICNDLPITNVKLHNLHVLKNTPLEEMYHKGEFLPIDKDTYTRRVELFLQHLSP 274


>gi|91773926|ref|YP_566618.1| ELP3 family histone acetyltransferase [Methanococcoides burtonii
           DSM 6242]
 gi|91712941|gb|ABE52868.1| Elongator complex protein 3 [Methanococcoides burtonii DSM 6242]
          Length = 548

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 93/252 (36%), Gaps = 27/252 (10%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N  IT E  P     ++       G  ++ +GVQS+ +  L  + R H+  +++ +  + 
Sbjct: 218 NTGITFETRPDWTNTDHVDRMLDLGATKVEIGVQSVYDFVLERMRRGHSVQDSVDSNRVL 277

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP     +     ++  S   +  D+L +Y   + +GT  Y M   
Sbjct: 278 RDSALKVGFHMMPHLPGMDSARDLRGFKKLFSDSNFMPDYLKIYPTLVTEGTELYDMWSG 337

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAY--------EI------SNHSFLGAESLHNL 267
           G+     +  A++L    ++I                 +I      SN   L  E L + 
Sbjct: 338 GEYEALGDEEAIELLADIKAILPKWVRMQRIQRDIPSPQIFAGVKKSNVRQLAKERLESR 397

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
                   I        R +   H V    E   +S    +        ++ FLS E  +
Sbjct: 398 GVKC--KCI--------RCREVGHNVLKGNEPDVDSIELTIDTYDSCGGKEHFLSFEDVS 447

Query: 328 DEFLMMGLRLRE 339
            + L+  LRLR 
Sbjct: 448 TDILIGFLRLRF 459


>gi|158319763|ref|YP_001512270.1| putative radical SAM protein [Alkaliphilus oremlandii OhILAs]
 gi|158139962|gb|ABW18274.1| conserved hypothetical radical SAM protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 318

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 9/155 (5%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNR-ISLG 136
           + +  ++    ++       +   VEI I   P  +     +         G+N  I LG
Sbjct: 95  TYMPLEDFKRYIEEA----VMDEIVEIAISTRPDCIREEYLEFLSDLRERTGLNISIELG 150

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+   SL+ + R H   E + A+   +     +   LI  LP   M       +   +
Sbjct: 151 LQSVNYHSLKKINRGHTLGEYLDAVLSIKKYGFSICTHLILNLPWDNMDDVIENAKIMSA 210

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             +D + L+ L I + T+  + +K G++ + S   
Sbjct: 211 LKMDQIKLHALYIMENTIMGEQYKRGEIEIASVEE 245


>gi|291278929|ref|YP_003495764.1| hypothetical protein DEFDS_0514 [Deferribacter desulfuricans SSM1]
 gi|290753631|dbj|BAI80008.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 301

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 76/212 (35%), Gaps = 23/212 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFG 77
           C  +        C YC+  S     +      +   +  ++        R I +   +F 
Sbjct: 29  CPNRDGYKGFGGCTYCNVKSFSNINEKDISKQVSDRIKFLE-------KRKIKNFIVYFQ 81

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---IS 134
             + +      I   ++    +  +   V I +   P  ++ +  + +++        + 
Sbjct: 82  SYSNTYGPIDMIKRKIEASLVDERI---VAIYVGTRPDCIDEDKIKYFKELSEKIDVVLE 138

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
            G+QS+   +L  + R     E   A+ L ++    +   +I+ LP +        ++  
Sbjct: 139 YGLQSIHNTTLEIINRGSTFEEFDFALKLTKSYGLPVCAHIIFGLPGENRDMMFETVKYL 198

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
               +D +  + L + KGT  +K   +GD+ L
Sbjct: 199 ADNKIDFIKFHHLHVVKGTKMHKEFLNGDIKL 230


>gi|68067647|ref|XP_675770.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56495143|emb|CAH99493.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 979

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 14/161 (8%)

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-----------IEANPSSVEVNNFQGYRKAGVNRIS 134
             NI  IL    K  ++    EI            +E  P  +  +     R  G  R+ 
Sbjct: 411 AANIYPILKNRRKKLSLKEEQEINEKSNCRIIGLTLETRPDQINKDELLRLRYYGCTRVQ 470

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q +++  L+ + R    ++ I AI+L +    ++   L+  LP   + +     +  
Sbjct: 471 LGIQHVDDYILKKVNRQCTLNDCIRAIYLLKENGFKVDIHLMPDLPYSNVQKDIEMFKYV 530

Query: 195 L---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           L       D   +Y   I   T   K + + +     EN  
Sbjct: 531 LMSTDLQADQWKIYPCEITPFTKIEKWYNNNEFKPYFENDK 571


>gi|325856681|ref|ZP_08172319.1| radical SAM protein, TIGR01212 family [Prevotella denticola CRIS
           18C-A]
 gi|325483395|gb|EGC86370.1| radical SAM protein, TIGR01212 family [Prevotella denticola CRIS
           18C-A]
          Length = 312

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 17/215 (7%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCD    + +     + F      +M+++            +F   T +         + 
Sbjct: 55  YCDNGKSITQQLEDGKQFFSRKYPDMKYLA-----------YFQAYTNTYGSN---NRLK 100

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
               +   V   V + I   P  +     + F+   +     +  GV++  + +LR + R
Sbjct: 101 ALYEEALAVEDVVGLVIGTRPDCINDTLLDYFEELNRRTFLIVEYGVETCNDGTLRLINR 160

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ + A  AI        R    +I  LP +   +   ++    S  +  L ++QL I 
Sbjct: 161 GHDFACARQAIEKTARRGIRTGAHIILGLPGEDAEESLRQVPIISSLPLTTLKIHQLQII 220

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +GT   KM+ D    L +    + L      +   
Sbjct: 221 RGTRLAKMYADHPFHLYTVEEYIRLIAAYIRLLRP 255


>gi|225850314|ref|YP_002730548.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Persephonella
           marina EX-H1]
 gi|225646637|gb|ACO04823.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Persephonella marina
           EX-H1]
          Length = 438

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 13/230 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C KKC YC            +   I   L E+QW+    G + I     G    +  +  
Sbjct: 157 CDKKCTYC---IVPYTRGKERSRRIGEILQEVQWLID-DGVKEIH--LIGQNVTAYGKDL 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                +D +     V     I     +P  ++    +   +       + L +Q+  ++ 
Sbjct: 211 GDVRFVDLLYAVADVEGVERIRFTTGHPRDLDEETIKAMAEIPQICEHLHLPIQAGSDRI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E +  I L +   P +S   D+I   P +T   +   ++       D +
Sbjct: 271 LKAMERGYTQKEYLEKIELLKKYIPDISLSTDIIVGFPGETYEDYMETIKVLKEVEYDQV 330

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++ +   GT   +M    D    + +  ++   L Q   +      YE
Sbjct: 331 FAFKYSPRPGTPAAQMPMTEDPK--TLSKWLNDLILMQKEITFKKNLQYE 378


>gi|281201455|gb|EFA75665.1| elongation protein 3 [Polysphondylium pallidum PN500]
          Length = 559

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 131/371 (35%), Gaps = 70/371 (18%)

Query: 28  C-VKKCP--------YC------DF-----------NSHVRRYKVGQENFIQSFLTEMQW 61
           C   +CP        YC      DF            + +R  +     ++Q+  + +  
Sbjct: 108 CKPHRCPHLAMTGNIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQT-KSRIDQ 166

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSS 104
           +++L            GGT   +  +     I  + D ++ +              + + 
Sbjct: 167 LKRLGHSVEKVEFIIMGGTFMSLPAEYRDYFIRNLHDALSGHSSNNVAEAVKYSEQSNTK 226

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            + ITIE  P      +       G  R+ +GVQS+ E   R   R H     + +  LA
Sbjct: 227 CIGITIETRPDHCLKLHLGNMLNYGCTRLEIGVQSVFEDIARDTNRGHTVRAVLESFQLA 286

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +     ME     ++  D L +Y   + +GT  Y++ K 
Sbjct: 287 KDSGFKVVAHMMPDLPNMGMERDVYGFMEFFENPAFRADGLKIYPTLVIRGTGLYELWKT 346

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRY 272
           G     S +  V   +L   I +        Y I          S +   +L  L   R 
Sbjct: 347 GTYKNYSPDSLV---DLIAKILALVPPWTRIYRIQRDIPMPLVTSGVEYGNLRELCLARM 403

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQAD 328
            D    G    ++ +    R     E H +     ++++R++  A    E FLS E    
Sbjct: 404 KD---FG----TKCRDVRTREVGIQEVHHKIKPDQVELIRRDYTANGGWETFLSYEDPKQ 456

Query: 329 EFLMMGLRLRE 339
           + L+  LRLR+
Sbjct: 457 DILIGLLRLRK 467


>gi|256827518|ref|YP_003151477.1| histone acetyltransferase [Cryptobacterium curtum DSM 15641]
 gi|256583661|gb|ACU94795.1| histone acetyltransferase [Cryptobacterium curtum DSM 15641]
          Length = 666

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 51/157 (32%), Gaps = 4/157 (2%)

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
           + I         V + +E  P ++   +    R+ G  ++ +GVQS  ++ L    R   
Sbjct: 319 EHIRNETADHRCVGLVVETRPDAISAESLHALREIGCTKVQIGVQSTRDEILAANDRGIT 378

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME---LQRALSYAVDHLSLYQLTIE 210
            +    A  L R    ++    +  L   T    + +        ++  D + LY   + 
Sbjct: 379 TATIKQAFRLLRVFGFKIHAHFMVNLLGSTPADDKRDYACFADTPAFRPDEVKLYPCALI 438

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +GT     H +     P     +        + +   
Sbjct: 439 EGTGLM-AHWEKGTWRPYSEDELVDVLTADVLATPAY 474


>gi|258623853|ref|ZP_05718807.1| Predicted Fe-S oxidoreductase [Vibrio mimicus VM603]
 gi|262166425|ref|ZP_06034162.1| hypothetical protein VMA_002881 [Vibrio mimicus VM223]
 gi|262170673|ref|ZP_06038351.1| hypothetical protein VII_001485 [Vibrio mimicus MB-451]
 gi|258583842|gb|EEW08637.1| Predicted Fe-S oxidoreductase [Vibrio mimicus VM603]
 gi|261891749|gb|EEY37735.1| hypothetical protein VII_001485 [Vibrio mimicus MB-451]
 gi|262026141|gb|EEY44809.1| hypothetical protein VMA_002881 [Vibrio mimicus VM223]
          Length = 312

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E   QS   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFAN-----EETQQQSIHDQLKDRAGEIKRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +   V+  V + +   P  V     +        G      LG+Q+  + +L+ 
Sbjct: 97  LKSMYEQALEVADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLELGLQTAHDHTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR +  ++   LI  LP +  ++    LQ+ L    D + L+ L
Sbjct: 157 INRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRSENMSTLQQVLKVGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
            I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 217 HIVEGSTMAKAWRAGRLAVLEQDEYVSIACEMIRSTPPQIIYHR 260


>gi|82539751|ref|XP_724239.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478822|gb|EAA15804.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 1028

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-----------IEANPSSVEVNNFQGYRKAGVNRIS 134
             NI  IL    K  ++    EI            +E  P  +  +     R  G  R+ 
Sbjct: 449 AANIYPILKNRRKKLSLKEEQEINEKSNCRIIGLTLETRPDQINKDELLRLRYYGCTRVQ 508

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q +++  L+ + R    ++ I AI+L +    ++   L+  LP   + +     +  
Sbjct: 509 LGIQHVDDYILKKVNRQCTLNDCIRAIYLLKENGFKVDIHLMPDLPYSNVQKDIEMFKYV 568

Query: 195 L---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           L       D   +Y   I   T   K + + +     E   
Sbjct: 569 LMSTDLQADQWKIYPCEITPFTKIEKWYNNNEFKPYFETDK 609


>gi|271498887|ref|YP_003331912.1| hypothetical protein Dd586_0310 [Dickeya dadantii Ech586]
 gi|270342442|gb|ACZ75207.1| conserved hypothetical protein [Dickeya dadantii Ech586]
          Length = 314

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++          S    +F   T +      + +
Sbjct: 50  CTFCNVASFADEQMQQR-----SIAEQLAAQAGKVNRASRYLAYFQAYTSTY---AEVQV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +    Y + G      LG+QS  +++LR 
Sbjct: 102 LASMYRQALAQADIVGLCVGTRPDCVPDTVLDLLADYHEQGYEVWLELGLQSAHDRTLRR 161

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +     +  AR    ++   LI  LP +        LQR +   V+ + L+ L
Sbjct: 162 INRGHDFACYQQTVQRARARGLKVCSHLIVGLPGERDEHCLSTLQRVVEAGVEGIKLHPL 221

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G++  K  + G L   S    V + +     T    ++   IS  + 
Sbjct: 222 HIVTGSVMAKAWQAGRLAALSLEHYVSIASEMIRHTPPDIVYH-RISASAR 271


>gi|225849941|ref|YP_002730175.1| radical SAM protein, family [Persephonella marina EX-H1]
 gi|225646612|gb|ACO04798.1| radical SAM protein, family [Persephonella marina EX-H1]
          Length = 307

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 73/217 (33%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+ N+    Y + ++         + + ++          +F   + +      +  
Sbjct: 42  CTFCN-NASFSPYAMSKQTVEDQIEKSIDFYKKRFKNIKGFIAYFQAFSNTYAPVSKLKE 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRF 147
           I D   +       + ++I   P                 +    I  G+Q+   ++LR 
Sbjct: 101 IYDRAMEY---DEIIGMSIGTRPDVAPDEALDLIATYTAYKPEIWIEYGLQTANIKTLRE 157

Query: 148 LGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + R H  SE + A+    +    ++   +I  LP  T   +    +   +  ++ + ++ 
Sbjct: 158 INRGHGVSEFVDAVLRTKKRAGIKVCAHMIVGLPGDTFEDYVETAKLIAALGIEGIKIHP 217

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           L I K T+  K    G +   +     D+      I 
Sbjct: 218 LHIVKHTIMEKQFYRGQIKTLTLEEYADIVAHLLDIL 254


>gi|71003460|ref|XP_756406.1| hypothetical protein UM00259.1 [Ustilago maydis 521]
 gi|46095784|gb|EAK81017.1| hypothetical protein UM00259.1 [Ustilago maydis 521]
          Length = 566

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 122/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS    +Q +R+
Sbjct: 95  CPHIALTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQS-KNRVQQLRE 153

Query: 65  LTGPRSISSIFFGGGTPSLIEP-------QNIALILDGI----------AKNWTVSSNVE 107
           L            GGT   +           +   L G                ++  + 
Sbjct: 154 LGHSVDKVEYIIMGGTFMSLSETYRNQFIAQLHNALSGFNGQDVDEAVKYSERALTKCIG 213

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA++ 
Sbjct: 214 ITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFQLAKDA 273

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       +  D L LY   + +GT  Y++ + G  
Sbjct: 274 GYKIVAHMMPDLPNVGVERDMEQFKEYFENPAFRTDGLKLYPTLVIRGTGLYELWRTGRY 333

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDY 275
              + +  V   +L   I +        Y +     +   S       L  L   R  D+
Sbjct: 334 KNYTPSFLV---DLVARILALVPPWTRVYRVQRDIPMPLVSSGVENGNLRELALERMRDF 390

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            G+        +VG H +   +       ++ +R++  A    E FL+ E    + L+  
Sbjct: 391 -GVTCRDVRYREVGLHEIHTKVRPDE---VEFIRRDYTANGGWESFLAYEDPEKDILIAL 446

Query: 335 LRLRE 339
           LRLR+
Sbjct: 447 LRLRK 451


>gi|303283528|ref|XP_003061055.1| histone acetyltransferase [Micromonas pusilla CCMP1545]
 gi|226457406|gb|EEH54705.1| histone acetyltransferase [Micromonas pusilla CCMP1545]
          Length = 525

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 125/362 (34%), Gaps = 57/362 (15%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+    +  +R+
Sbjct: 74  CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYVQA-RGRVDQLRK 132

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN-----------------WTVSSNVE 107
           L            GGT   +  +     +  +                     +    V 
Sbjct: 133 LGHSVDKVEYILMGGTFMSLPAEYRDWFVRNLHDALSGASSASVADAVAASEQSRMKCVG 192

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +G+QS+ E   R   R H          LA++ 
Sbjct: 193 LTIETRPDYCLSPHLRQMLLYGCTRLEIGLQSIYEDVARDTNRGHTVEAVQKCFELAKDA 252

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +     +       +  D L LY   + +GT  Y++ + G  
Sbjct: 253 GFKVVVHMMPDLPNVGMERDLESFREFFESPDFRTDGLKLYPTLVIRGTGLYELWRTGRY 312

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
              + +  VDL     ++     +  Y +          + +   +L  L   R GD +G
Sbjct: 313 RNYAPDRLVDLVARALALVPP-WVRVYRVQRDIPMPLVTAGVEKGNLRELALARMGD-LG 370

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLR 336
           +        +VG   +   ++  PE  +++VR++  A    E FLS E    + L+  LR
Sbjct: 371 LRCRDVRTREVGIQDIHSKVK--PEE-VELVRRDYAANGGWETFLSYEDPRQDILVGLLR 427

Query: 337 LR 338
           LR
Sbjct: 428 LR 429


>gi|109716226|gb|ABG43095.1| histone acetyltransferase HAT2 [Triticum aestivum]
          Length = 569

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 113/332 (34%), Gaps = 38/332 (11%)

Query: 38  NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN----IALIL 93
            + +R  +     ++Q+  + +  +++L            GGT   +        I  + 
Sbjct: 154 PTSMRAIRARYNPYVQA-RSRIDQLKRLGHSADKVEFILMGGTFMSLPADYRDYFIRNLH 212

Query: 94  DG-------------IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           D                   +    + +TIE  P      + +     G  R+ +GVQS 
Sbjct: 213 DALSGHTSANVEEAVCYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQST 272

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---Y 197
            E   R   R H  +       LA++   ++   ++  LP   + +     +       +
Sbjct: 273 YEDVARDTNRGHTVAAVADCFSLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFENPAF 332

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISN 255
             D L +Y   + +GT  Y++ K G        + V   ++   I S        Y +  
Sbjct: 333 RADGLKIYPTLVIRGTGLYELWKTGRYRNYPPELLV---DIVARILSMVPPWTRVYRVQR 389

Query: 256 H-------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMV 308
                   S +   +L  L   R  D +G+        + G   +   I       +++V
Sbjct: 390 DIPMPLVTSGVEKGNLRELALARMED-LGLKCRDVRTREAGIQDIHHKIRPDE---VELV 445

Query: 309 RKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
           R++  A    E FLS E    + L+  LRLR+
Sbjct: 446 RRDYAANDGWETFLSYEDTRQDILIGLLRLRK 477


>gi|313126156|ref|YP_004036426.1| histone acetyltransferase, elp3 family [Halogeometricum borinquense
           DSM 11551]
 gi|312292521|gb|ADQ66981.1| histone acetyltransferase, ELP3 family [Halogeometricum borinquense
           DSM 11551]
          Length = 586

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 104/313 (33%), Gaps = 23/313 (7%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M      + P+      F    P   E      + D IA+
Sbjct: 198 TMTARSHDYQEWFVKRALEAMNDYDLDSDPQPAEDQSFKP-DP---EDVEFRYLEDVIAE 253

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T    N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    +
Sbjct: 254 NETADVRNIGTTFETKPDWCDPEQINRMLDLGATKVEVGVQTTYERINREMHRGHGVQAS 313

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTL 214
           + A    R+   ++ F ++   P  T      + ++      +  D+L +Y   + + T+
Sbjct: 314 LDANRRLRDSAFKVGFHMMPGQPGMTKEMCVEDFRQLFENSDWRPDYLKIYPTLVVRDTI 373

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSI---TSAHGLHAYEISNHSFLGAESLHN---LN 268
            Y M +  +    +   A D+      +    +       +I            N   L 
Sbjct: 374 TYDMWRRDEYEPLNNEEAADVVAEVMGMIPKYTRLQRVQRDIPADFIDAGVWKSNLRQLA 433

Query: 269 YWRYGDYIGIGPGAHSRVKVGSHRVAISI--EKHPESWLKMVRKNGHAVVEKEFLSSEQQ 326
             R  +  GI       +     R       +  PE     V     A   + F+S E  
Sbjct: 434 EQRAAEK-GI------ELNDIRSREVGMNDADPDPERVELQVETYEAAEGTEHFISFEDP 486

Query: 327 ADEFLMMGLRLRE 339
           A+  L+   RLR 
Sbjct: 487 AENLLIGFCRLRF 499


>gi|152991288|ref|YP_001357010.1| hypothetical protein NIS_1546 [Nitratiruptor sp. SB155-2]
 gi|151423149|dbj|BAF70653.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 315

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 61/165 (36%), Gaps = 3/165 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +     +       V ++I     SV                  I  G+QS+ +++L
Sbjct: 113 LDTLKTLYTEALKQPQCVGLSIGTRSDSVTEQILDYLADLSQEYEIWIEYGIQSIFDETL 172

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R H+A+     I  ++    ++   +I+ LP +T       +++++ + +D + ++
Sbjct: 173 QKINRGHDAANVEEWIRKSKEKGLKVCGHVIFGLPDETPDMMLQTVKKSIEWGIDSIKIH 232

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + K T     +  G     S+   ++       I     +  
Sbjct: 233 PLYVVKNTALAVDYMKGKFTPISQETYIETLVEAIKILPKDMVIQ 277


>gi|91201888|emb|CAJ74948.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 340

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 82/257 (31%), Gaps = 24/257 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC   S     +    +  +       + +Q  G     + +F   
Sbjct: 45  CPNRDGRSGVGGCTYCANESFSPNVRKPSLSITEQIRKGKSFQKQRYGAEKFIA-YFQSF 103

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +     +   +     +  + S  V ++I   P  V  +               I  G
Sbjct: 104 TNTY---ADFHTLKACYEEALSDSDVVGLSIGTRPDCVNEDILNLINSYTEKYHVWIEYG 160

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+ E++L+ + R H+    + AI+L +     +   +I  LP +T             
Sbjct: 161 LQSIHEETLKRINRGHDYKSFVEAINLTKKTCINICVHVILGLPFETDDDMMKTADAVAE 220

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK---------DGDLVLPSENVAVDLYNLTQSITSAHG 247
             +  + L+ L + K T   + +             + L ++ +     ++T        
Sbjct: 221 MGIQGIKLHHLYVAKNTALAEEYFKGNVTTLDIHEYVRLAADFLERIPPDVTIQRLVGDT 280

Query: 248 LHAYEISNHSFLGAESL 264
              + IS     G  S+
Sbjct: 281 HGNFLISPVWKAGKSSI 297


>gi|153840445|ref|ZP_01993112.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
 gi|149745893|gb|EDM57023.1| radical SAM protein, family [Vibrio parahaemolyticus AQ3810]
          Length = 262

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 78/210 (37%), Gaps = 10/210 (4%)

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
           S   +++              +F   T +      + ++ +   +    +  V + +   
Sbjct: 5   SIHEQLKDRAGEIHRAKKYLAYFQAYTSTY---AEVQVLKNMYEEALKAADIVGLCVGTR 61

Query: 114 PSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           P  V  +         VN+     + LG+Q+    +L+ + R H+          AR + 
Sbjct: 62  PDCVPDSVLDLLSDY-VNQGYEIWLELGLQTANNDTLKRINRGHDFECYAEITQRARALG 120

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            ++   LI  LPK+T       LQ+ L+   D + L+ L I +G+   K  + G L  P 
Sbjct: 121 IKVCTHLIVGLPKETRDDNIETLQKVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPG 180

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
               V + +    +T A  +    +S+ + 
Sbjct: 181 LEEYVAIASEMIRMTPADVVFH-RVSSAAR 209


>gi|222056763|ref|YP_002539125.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221566052|gb|ACM22024.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 624

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       +  VG  +F    L  +         R ++ +F    T +    Q
Sbjct: 192 CNFACEFC----FDHKGGVGVRHF---SLERITQELNFLVKRKVAQVFVLDSTFN----Q 240

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           ++      +     V+ ++    E     ++    + + +   + + +G+QS +   LR 
Sbjct: 241 DMKRAKKILRLIKKVAPHIHFHFEVRSEFIDAELARLFAEITCS-LQIGLQSADPLVLRN 299

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +GR  N  +    I +  N+     FDLIY LP  ++  +   L  ALS   +HL ++ L
Sbjct: 300 VGRVFNRQDFSIKIGMLNNVGAIFGFDLIYGLPGDSLAGFRQSLDFALSLYPNHLDIFPL 359

Query: 208 TIEKGTLFYKM 218
            +  GT   + 
Sbjct: 360 AVLPGTRLAER 370


>gi|108813598|ref|YP_649365.1| hypothetical protein YPN_3438 [Yersinia pestis Nepal516]
 gi|145597657|ref|YP_001161733.1| hypothetical protein YPDSF_0341 [Yersinia pestis Pestoides F]
 gi|108777246|gb|ABG19765.1| hypothetical protein YPN_3438 [Yersinia pestis Nepal516]
 gi|145209353|gb|ABP38760.1| hypothetical protein YPDSF_0341 [Yersinia pestis Pestoides F]
          Length = 314

 Score = 80.7 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 81/229 (35%), Gaps = 12/229 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F           +    +    +Q  +     R ++  +F   T +      +  +  
Sbjct: 52  CTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLA--YFQAYTSTY---AEVNALAA 106

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRFLGR 150
              +    +  V + +   P  V           ++ G      LG+Q+  +++L+ + R
Sbjct: 107 MYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINR 166

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L I 
Sbjct: 167 GHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIV 226

Query: 211 KGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +G+   K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 227 EGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHR--ISASAR 273


>gi|294793791|ref|ZP_06758928.1| radical SAM protein family [Veillonella sp. 3_1_44]
 gi|294455361|gb|EFG23733.1| radical SAM protein family [Veillonella sp. 3_1_44]
          Length = 321

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 16/211 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNI 89
           C +C     +      +  ++   +   + +  +                  + +   + 
Sbjct: 48  CTFCG---EIGAGYENRPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLNLDDF 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEEQ 143
              ++       +   V I I   P  +     +       +R      I LG+Q++   
Sbjct: 105 KSYIEQGC----IDEAVGIAIATRPDCIADEYLEILADIR-DRFHKDIYIELGLQTVNYD 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H+ ++ I A+   +     ++  +I  LP  TM       +   +  VD + 
Sbjct: 160 TLEKINRGHDLAQFIDAVLRIKRYGFNITTHMIVNLPWDTMKDTIEGARILSALGVDQVK 219

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           L+ L I K TL  K +++G   L S     D
Sbjct: 220 LHALYIVKDTLMAKWYQEGQFTLISAEEYAD 250


>gi|125986433|ref|XP_001356980.1| GA13723 [Drosophila pseudoobscura pseudoobscura]
 gi|54645306|gb|EAL34046.1| GA13723 [Drosophila pseudoobscura pseudoobscura]
          Length = 550

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFVQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLSEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVAHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYDIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|318604059|emb|CBY25557.1| putative Fe-S oxidoreductase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 300

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   Q    ++    +          +F   T +      +  
Sbjct: 45  CTFCNVASFA-----DEQMQQQGITQQLAEQTKKANRAKRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAVMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLELGLQTANDKTLKH 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEEQAQCMETLEKVVATGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSIMAKAWRAGRLPELALEDYVLTAGEMIRHTPADIVYHR--ISASAR 266


>gi|134299221|ref|YP_001112717.1| putative radical SAM protein [Desulfotomaculum reducens MI-1]
 gi|134051921|gb|ABO49892.1| conserved hypothetical radical SAM protein [Desulfotomaculum
           reducens MI-1]
          Length = 318

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 76/232 (32%), Gaps = 36/232 (15%)

Query: 23  VHWPF-CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           V+ P  C  +        C +CD           +    +     +   +Q+   R    
Sbjct: 29  VNLPGSCPNRDGTVGRGGCIFCD----------EEGAGFECLPNTLSVKQQIQKNREFFV 78

Query: 74  ---------IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                    ++F   T + +  +      + I         + I+I   P  +       
Sbjct: 79  KRFNAKKFIVYFQAFTNTYMPLEQFK---ENIRAALNEEDVIGISISTRPDCINDVYLDF 135

Query: 125 YRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
            +     R     I LG+Q++   +L  + R H  +E I A+   +     +   +I  L
Sbjct: 136 LKDIQNQRGLDINIELGLQTVNYHTLTKVNRGHTLAEFIDAVQRIKQRNFEICVHIILNL 195

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           P   +       +   +  + ++ L+ L + KGT+   M++  +  + S   
Sbjct: 196 PWDNLLDVIENAKILSAMDIHYVKLHSLYVVKGTVLADMYERDEFSIISLEE 247


>gi|313759742|gb|ADR79183.1| coproporphyrinogen III oxidase [Chlamydophila abortus]
 gi|313759754|gb|ADR79189.1| coproporphyrinogen III oxidase [Chlamydophila abortus]
          Length = 144

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 2/129 (1%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R   F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSYEESLYAYEKFRELGFESINIDLIYGLPKQTKVTFTQT 60

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   L    D L+L+        +        +  +PS      +Y+  +   +  G  A
Sbjct: 61  IADILHMRPDRLALFSFASVP-WIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQA 119

Query: 251 YEISNHSFL 259
             + + S  
Sbjct: 120 IGLDHFSLP 128


>gi|255089789|ref|XP_002506816.1| histone acetyltransferase [Micromonas sp. RCC299]
 gi|226522089|gb|ACO68074.1| histone acetyltransferase [Micromonas sp. RCC299]
          Length = 541

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 65/364 (17%), Positives = 127/364 (34%), Gaps = 61/364 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + ++Q+    +  +R+
Sbjct: 91  CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYVQA-RGRVDQLRR 149

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     +  + D               A   + +  V 
Sbjct: 150 LGHSVDKVEYILMGGTFMSLPAEYRDWFVRNLHDALSGASSSNVADAVAASEHSHTKCVG 209

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +G+QS+ E   R   R H  +       LA++ 
Sbjct: 210 LTIETRPDYCLSPHLRQMLGYGCTRLEIGLQSVYEDVARDTNRGHTVAAVQKCFELAKDA 269

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +     +       +  D L LY   + +GT  Y++ + G  
Sbjct: 270 GFKVVVHMMPDLPNVGMERDLESFREFFESPDFRTDGLKLYPTLVIRGTGLYELWRTGRY 329

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              + +  V   +L   + +     +  Y +          + +   +L  L   R GD 
Sbjct: 330 KNYAPDRLV---DLVARVLALVPPWVRVYRVQRDIPMPLVTAGVEKGNLRELALARMGD- 385

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G+        +VG   +   ++      +++VR++  A    E FL+ E    + L+  
Sbjct: 386 LGLRCRDVRTREVGIQDIHSKVKPRE---VELVRRDYAANGGWETFLAYEDPGRDILVGL 442

Query: 335 LRLR 338
           LRLR
Sbjct: 443 LRLR 446


>gi|255691115|ref|ZP_05414790.1| radical SAM protein, family [Bacteroides finegoldii DSM 17565]
 gi|260623468|gb|EEX46339.1| radical SAM protein, family [Bacteroides finegoldii DSM 17565]
          Length = 323

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E ++      P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKSITTQLQEGKYFFAHKYPEMKYLAYFQAYTNTY---AELEG 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +        +   K     +  G++S  +++L+ +
Sbjct: 101 LKRKYEEALKVDGVVGLVIGTRPDCMPEGLLHYLEELNKHAFLMVEYGIESTCDKTLQRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E + A+             +I  LP +T      +        +  L ++QL 
Sbjct: 161 NRGHTYAETVEAVERTAACGILTGGHIILGLPGETHETMVEQAGILSRLPLSTLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     + +            +  +L       
Sbjct: 221 LIRGTRMAHEYAEVPDDFHLFTEVDEYIDLVIDYIEH 257


>gi|332653381|ref|ZP_08419126.1| radical SAM domain protein [Ruminococcaceae bacterium D16]
 gi|332518527|gb|EGJ48130.1| radical SAM domain protein [Ruminococcaceae bacterium D16]
          Length = 292

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 86/233 (36%), Gaps = 15/233 (6%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C     + + K  +   ++  L ++   R   GP  +  +F   G   +++  ++ 
Sbjct: 30  KCTFCA----MYKEKKFRIRPVEEILEDIDMARDYYGP-GLKRVFLMDGDAVIMKTDDLI 84

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IL  +    T  +  ++T  A P S         +  R AG+NR  LGV+S  +  L+ 
Sbjct: 85  RILRKLYD--TFPALEKVTTYAGPRSTLAKSPEELKAIRDAGLNRAYLGVESGSDAVLKA 142

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT---MTQWEMELQRALSYAVDHLSL 204
           + +   A++ + A          +   +I  L  Q            +   +    HLS 
Sbjct: 143 INKGVTAAQMLEAGQKLVAAGFDLWAIVIMGLTGQDGDWEEHILSTAKMINAMKPRHLSA 202

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
                 KGT   +    G   + + +  ++  +L         LH    SNH+
Sbjct: 203 MTFAPAKGTPLGEDVLAGRFKVCTPDQILEECHLLVESLDVDPLHF--TSNHA 253


>gi|261350297|ref|ZP_05975714.1| oxygen-independent coproporphyrinogen III oxidase
           [Methanobrevibacter smithii DSM 2374]
 gi|288861081|gb|EFC93379.1| oxygen-independent coproporphyrinogen III oxidase
           [Methanobrevibacter smithii DSM 2374]
          Length = 554

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 23/248 (9%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T E  P   +  +       GV R+ LGVQ+L ++    + R H  ++ I +  L 
Sbjct: 224 CVGMTFETRPDYCKKEHINRMLDFGVTRVELGVQTLSDELYTKIKRGHTIADVIESNTLL 283

Query: 165 RNIFPRMSFDLIYALP---KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   +++  ++  L     + +  ++  L    ++  D L +Y   + KG+  Y + K+
Sbjct: 284 RDSAVKVAMHMMPGLFVSPDEDLNMFKK-LFSDDNFKPDMLKIYPCLVTKGSELYDLWKE 342

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISN---HSFLGAESLHNLNYWRYGDY 275
           G     ++  AVDL    + I            +I +    + +   +L  L Y +  + 
Sbjct: 343 GKYNPYTDEEAVDLIVKIKQILPKWVRTMRIQRDIPSTLIEAGVQKSNLGELVYNKLEE- 401

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW----LKMVRKNGHAVVEKE-FLSSEQQADEF 330
                  H           I  +K  + +     K+ +++ +A   +E FLS E + +E 
Sbjct: 402 -------HDINCQCIRCREIGHKKTSQEYSLDDFKLFKESYNACGGEETFLSIEDKNEES 454

Query: 331 LMMGLRLR 338
           ++  LR R
Sbjct: 455 IVGFLRFR 462


>gi|303390340|ref|XP_003073401.1| histone acetyltransferase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302547|gb|ADM12041.1| histone acetyltransferase [Encephalitozoon intestinalis ATCC 50506]
          Length = 559

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 124/377 (32%), Gaps = 68/377 (18%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSF------LTEMQWMRQL 65
           C         C YC      DF     S+              +         ++ ++ L
Sbjct: 87  CPHIALTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFEQARERLKQLKSL 146

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVS-------------SNVEI 108
                       GGT   +        I+ + D ++ + + S               V I
Sbjct: 147 GHNVDKVEYIIMGGTFMSLPESYRDHFISRLHDALSGHTSASVEEAVRVGAEGRLKCVGI 206

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  RI +GVQS+ E       R H       +  L+++  
Sbjct: 207 TIETRPDFCVRPHLSKMLSYGCTRIEIGVQSVYEDVALDTNRGHTVGSVCESFGLSKDAG 266

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + KGT  +++ K+    
Sbjct: 267 FKIVAHMMPNLPNVPMKRDLAQFREYFDNPRFRSDGLKIYPTLVIKGTGLFELWKNNKYK 326

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
             S +  +   +L   I S     +  Y +          S +   ++  L   R  DY 
Sbjct: 327 NYSPDELI---DLLARILSFVPPWMRVYRVQRDIPMTLVSSGVEHGNIRELALARMKDY- 382

Query: 277 GIGPGAHSRVKVGSHRVAISIEKH----PESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
                  +R +    R       H    PE  +++VR++  A    E FLS E    + L
Sbjct: 383 ------RTRCRDVRTREVGIKNIHESVLPEE-VELVRRDYVANKGWETFLSYEDVKQDIL 435

Query: 332 MMGLRLREGISVKDWEM 348
           +  LRLR+  SV  +  
Sbjct: 436 IGLLRLRK-CSVDTFRK 451


>gi|195159520|ref|XP_002020626.1| GL15175 [Drosophila persimilis]
 gi|194117576|gb|EDW39619.1| GL15175 [Drosophila persimilis]
          Length = 550

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFVQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLSEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVAHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYDIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|160946962|ref|ZP_02094165.1| hypothetical protein PEPMIC_00923 [Parvimonas micra ATCC 33270]
 gi|158447346|gb|EDP24341.1| hypothetical protein PEPMIC_00923 [Parvimonas micra ATCC 33270]
          Length = 315

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 11/177 (6%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           ++F   T + +  ++   +++    +  +   + I++   P  +        +    NR 
Sbjct: 86  VYFQNFTNTYLGMEDFKKMIEDSVVDEDI---IGISLSTRPDCILEEQLLFLKNFQKNRN 142

Query: 133 ----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
                 LG+Q++  ++L  L R H  +E I A++L      R+   +I  LP        
Sbjct: 143 LEIDFELGLQTVNYRTLIKLNRGHTLAEFINAVNLIHKFGFRVCTHIIVGLPWDDELDMV 202

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +   +  V+ + L+ L I K T+  +M+  G++ L          +L  S    
Sbjct: 203 ESAKILSALKVEEVKLHSLYIVKNTVLGEMYSKGEIELI---SKAKFIDLVISFLRN 256


>gi|168045175|ref|XP_001775054.1| RNA polymerase II elongator complex, subunit ELP3/histone
           acetyltransferase [Physcomitrella patens subsp. patens]
 gi|162673641|gb|EDQ60161.1| RNA polymerase II elongator complex, subunit ELP3/histone
           acetyltransferase [Physcomitrella patens subsp. patens]
          Length = 566

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 45/248 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+    +  +++
Sbjct: 114 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQA-RGRIDQLKR 172

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VE 107
           L            GGT   +        I  + D ++ + +   +             + 
Sbjct: 173 LGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSHDVDEAVRYSEHGNVKCIG 232

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 233 LTIETRPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVEDCFRLAKDA 292

Query: 168 -FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            F  +   ++  LP   M +     +       +  D L LY   + +GT  Y++ K G 
Sbjct: 293 GFKVIVAHMMPNLPNVDMERDMESFREFFENPAFRTDGLKLYPTLVIRGTGLYELWKTGR 352

Query: 224 LVLPSENV 231
                   
Sbjct: 353 YRNYPPEQ 360


>gi|258572072|ref|XP_002544814.1| hypothetical protein UREG_04331 [Uncinocarpus reesii 1704]
 gi|237905084|gb|EEP79485.1| hypothetical protein UREG_04331 [Uncinocarpus reesii 1704]
          Length = 562

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 73/403 (18%), Positives = 125/403 (31%), Gaps = 70/403 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   RS+
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIRSL 180

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTV----------SSNVEI 108
                       GGT   +           +   L G   N             +  V I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTNNVDEAVQAGEMSNTKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 241 TIETRPDYCLDTHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNMGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   ++++R++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYVANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 RE--------------GISVKDWEML-AGRNLDIECERNLQRQ 365
                           G   + ++    G  L  E ER  + +
Sbjct: 476 LWFASCMFMGSAVPVHGRDPRKFQHRGFGTLLMEEAERIARDE 518


>gi|14520689|ref|NP_126164.1| hypothetical protein PAB0314 [Pyrococcus abyssi GE5]
 gi|5457905|emb|CAB49395.1| Fe-S oxidoreductase family protein [Pyrococcus abyssi GE5]
          Length = 425

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-LIEP 86
           C   C YC        Y  G     +     +++ R++   R I+   F  G+P  +++ 
Sbjct: 175 CPFGCYYC-----QTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKI 229

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEE 142
           + +  +L  +         +       E  P  V     +         R+++G QS ++
Sbjct: 230 EKVEALLRALQPLRKEGRRLFYGTFPSEVRPEFVTRETIELLVDYTDTRRLAIGAQSGDD 289

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
             L+ + R H     + A+ LA         D I  LP +T         L + +     
Sbjct: 290 AMLKAMHRVHKVEHVVNAVELALEYGLTPVVDFIVGLPNETPESQRKSIELMKWIMRKGG 349

Query: 201 HLSLYQLTIEKGTLFYK 217
            +  +      GT + +
Sbjct: 350 KVRAHYFMPLPGTPWAR 366


>gi|238785116|ref|ZP_04629111.1| hypothetical protein yberc0001_380 [Yersinia bercovieri ATCC 43970]
 gi|238714008|gb|EEQ06025.1| hypothetical protein yberc0001_380 [Yersinia bercovieri ATCC 43970]
          Length = 300

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 85/232 (36%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     V  +   ++   QS   ++    + T   +    +F   T +      +  
Sbjct: 45  CTFC----QVASF-ADEQMQQQSIAQQLAAQAKKTNRANRYLAYFQAYTSTY---AEVNA 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +   GY + G      LG+Q+  +++L+ 
Sbjct: 97  LAVMYEQALAEADIVGLCVGTRPDCVPDAVLDLLSGYHQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L+  ++  VD L L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDQAQGMETLEMVVATGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  L  E+       + +   +    H   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPALALEDYVQTAGEMIRHTPAEIVYHR--ISASAR 266


>gi|325269261|ref|ZP_08135879.1| TIGR01212 family radical SAM protein [Prevotella multiformis DSM
           16608]
 gi|324988388|gb|EGC20353.1| TIGR01212 family radical SAM protein [Prevotella multiformis DSM
           16608]
          Length = 312

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 17/215 (7%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCD    + +     + F      +M+++            +F   T +         + 
Sbjct: 55  YCDNGKSITQQLEDGKRFFSGKYPDMKYLA-----------YFQAYTNTYGSN---NRLK 100

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
               +   V   V + I   P  +     + F+   +     +  GV++  + +LR + R
Sbjct: 101 GLYEEALAVEDVVGLVIGTRPDCINDTLLDYFEELNRRTFLIVEYGVETCNDSTLRLINR 160

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ + A  AI        R    +I  LP +   +   +     S  +  L ++QL I 
Sbjct: 161 GHDFACARQAIEKTARRGIRTGAHIILGLPGEDAEESLRQAPIISSLPLTTLKIHQLQII 220

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +GT   KM+ D    L +    + L      +   
Sbjct: 221 RGTRLAKMYADHPFHLYTVEEYIRLIAAYIRLLRP 255


>gi|289423745|ref|ZP_06425540.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
 gi|289155784|gb|EFD04454.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
          Length = 335

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 80/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          +++ +  F   M+ M +   P++    +F   T +   
Sbjct: 51  CTYCSKEGSGDF------AGNPKDDLVTQF-QAMRLMMEKKWPKAKYIGYFQAFTNTYAP 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ D         + V ++I   P  +E +  +            + LG+Q++ +
Sbjct: 104 ---LEVLRDKYEVILEQDNVVGLSISTRPDCIEDDVLEYLDDLNKRTDLWVELGLQTIHD 160

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              + + R H+ +  +  ++  R+    +   +I  LP +         +      +  +
Sbjct: 161 DISKRINRGHDYAIFLECVNRLRSKNINVVVHIIDGLPGEDHDMMLETAKAISKLDIQGV 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T+  + +  G   L ++   V +      I     +  
Sbjct: 221 KIHLLHVIKDTVMARQYDKGQFDLMTKEDYVKIVCDQLEILPQEMVIH 268


>gi|51597793|ref|YP_071984.1| hypothetical protein YPTB3501 [Yersinia pseudotuberculosis IP
           32953]
 gi|153949697|ref|YP_001399461.1| radical SAM family protein [Yersinia pseudotuberculosis IP 31758]
 gi|153997331|ref|ZP_02022431.1| hypothetical protein YPE_3778 [Yersinia pestis CA88-4125]
 gi|165928099|ref|ZP_02223931.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937398|ref|ZP_02225961.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011299|ref|ZP_02232197.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167420787|ref|ZP_02312540.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426995|ref|ZP_02318748.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218930568|ref|YP_002348443.1| hypothetical protein YPO3556 [Yersinia pestis CO92]
 gi|229837085|ref|ZP_04457250.1| predicted Fe-S oxidoreductase [Yersinia pestis Pestoides A]
 gi|229839212|ref|ZP_04459371.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229899776|ref|ZP_04514917.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229904092|ref|ZP_04519203.1| predicted Fe-S oxidoreductase [Yersinia pestis Nepal516]
 gi|294505321|ref|YP_003569383.1| hypothetical protein YPZ3_3212 [Yersinia pestis Z176003]
 gi|51591075|emb|CAH22739.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349179|emb|CAL22144.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288968|gb|EDM39048.1| hypothetical protein YPE_3778 [Yersinia pestis CA88-4125]
 gi|152961192|gb|ABS48653.1| radical SAM protein, TIGR01212 family [Yersinia pseudotuberculosis
           IP 31758]
 gi|165914503|gb|EDR33117.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919873|gb|EDR37174.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989683|gb|EDR41984.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166961593|gb|EDR57614.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167054035|gb|EDR63863.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229678210|gb|EEO74315.1| predicted Fe-S oxidoreductase [Yersinia pestis Nepal516]
 gi|229687268|gb|EEO79343.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695578|gb|EEO85625.1| predicted Fe-S oxidoreductase [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706028|gb|EEO92037.1| predicted Fe-S oxidoreductase [Yersinia pestis Pestoides A]
 gi|294355780|gb|ADE66121.1| hypothetical protein YPZ3_3212 [Yersinia pestis Z176003]
 gi|320017098|gb|ADW00670.1| putative Fe-S oxidoreductase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 307

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 81/229 (35%), Gaps = 12/229 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F           +    +    +Q  +     R ++  +F   T +      +  +  
Sbjct: 45  CTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLA--YFQAYTSTY---AEVNALAA 99

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRFLGR 150
              +    +  V + +   P  V           ++ G      LG+Q+  +++L+ + R
Sbjct: 100 MYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINR 159

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L I 
Sbjct: 160 GHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIV 219

Query: 211 KGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +G+   K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 220 EGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHR--ISASAR 266


>gi|46202017|ref|ZP_00053952.2| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 415

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 83/227 (36%), Gaps = 9/227 (3%)

Query: 28  CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K+C YC   S    +++    +++      ++ +  L     +  I F     +   P
Sbjct: 118 CPKRCIYCSIQSVWSHKWRHHSADYV------VRQIEHLVRDYGVGEIHFVDDNLTA-NP 170

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +    I   + +   +             +++       + +G  R++ G+++  +++  
Sbjct: 171 KTAMEIFQTLIER-KLDVKWTCPNGTAIWTLDEKLLDVMKTSGCYRLTFGIEAASKETQA 229

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           ++ +N N   A A +  A  I        I+  P QT    +  ++ A+S   D  + Y 
Sbjct: 230 YIRKNLNTERARAMLSYANKIGIWTVSTFIFGFPHQTKEDMQDSIRYAISSGTDFATFYS 289

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           L     T  +++ K  DL+   +      Y L+          + EI
Sbjct: 290 LMPFPKTELWEILKKEDLINEGDFFENIGYYLSTRGLDTTLYKSDEI 336


>gi|22124047|ref|NP_667470.1| hypothetical protein y0127 [Yersinia pestis KIM 10]
 gi|45443541|ref|NP_995080.1| hypothetical protein YP_3810 [Yersinia pestis biovar Microtus str.
           91001]
 gi|166212030|ref|ZP_02238065.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167469339|ref|ZP_02334043.1| Uncharacterized Fe-S oxidoreductase [Yersinia pestis FV-1]
 gi|170022782|ref|YP_001719287.1| putative radical SAM protein [Yersinia pseudotuberculosis YPIII]
 gi|186896984|ref|YP_001874096.1| putative radical SAM protein [Yersinia pseudotuberculosis PB1/+]
 gi|270488526|ref|ZP_06205600.1| radical SAM protein, TIGR01212 family [Yersinia pestis KIM D27]
 gi|21956793|gb|AAM83721.1|AE013613_1 hypothetical protein y0127 [Yersinia pestis KIM 10]
 gi|45438410|gb|AAS63957.1| Uncharacterized Fe-S oxidoreductases [Yersinia pestis biovar
           Microtus str. 91001]
 gi|166206776|gb|EDR51256.1| radical SAM protein, TIGR01212 family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|169749316|gb|ACA66834.1| conserved hypothetical radical SAM protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186700010|gb|ACC90639.1| conserved hypothetical radical SAM protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|262363384|gb|ACY60105.1| hypothetical protein YPD4_3201 [Yersinia pestis D106004]
 gi|262367238|gb|ACY63795.1| hypothetical protein YPD8_3125 [Yersinia pestis D182038]
 gi|270337030|gb|EFA47807.1| radical SAM protein, TIGR01212 family [Yersinia pestis KIM D27]
          Length = 329

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 81/229 (35%), Gaps = 12/229 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F           +    +    +Q  +     R ++  +F   T +      +  +  
Sbjct: 67  CTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLA--YFQAYTSTY---AEVNALAA 121

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRFLGR 150
              +    +  V + +   P  V           ++ G      LG+Q+  +++L+ + R
Sbjct: 122 MYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINR 181

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L I 
Sbjct: 182 GHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIV 241

Query: 211 KGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +G+   K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 242 EGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHR--ISASAR 288


>gi|195437773|ref|XP_002066814.1| GK24679 [Drosophila willistoni]
 gi|194162899|gb|EDW77800.1| GK24679 [Drosophila willistoni]
          Length = 550

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 121/369 (32%), Gaps = 69/369 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLSEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS------YAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   ++  LP      +E ++ + +       +  D L +Y   + +GT  Y++ + 
Sbjct: 280 GYKIVAHMMPDLPN---VDFERDIDQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWRT 336

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRY 272
           G       ++ V   +L   I +        Y +          S +   +L  L   R 
Sbjct: 337 GRYKSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARM 393

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEF 330
            D      G   R           I      + ++++R++  A    E FLS E    + 
Sbjct: 394 KDL-----GTSCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDI 448

Query: 331 LMMGLRLRE 339
           L+  LRLR+
Sbjct: 449 LVGLLRLRK 457


>gi|148642902|ref|YP_001273415.1| radical SAM superfamily histone acetyltransferase
           [Methanobrevibacter smithii ATCC 35061]
 gi|148551919|gb|ABQ87047.1| histone acetyltransferase, radical SAM superfamily
           [Methanobrevibacter smithii ATCC 35061]
          Length = 554

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 23/248 (9%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T E  P   +  +       GV R+ LGVQ+L ++    + R H  ++ I +  L 
Sbjct: 224 CVGMTFETRPDYCKKEHINRMLDFGVTRVELGVQTLSDELYTKIKRGHTIADVIESNTLL 283

Query: 165 RNIFPRMSFDLIYALP---KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   +++  ++  L     + +  ++  L    ++  D L +Y   + KG+  Y + K+
Sbjct: 284 RDSAVKVAMHMMPGLFVSPDEDLNMFKK-LFSDDNFKPDMLKIYPCLVTKGSELYDLWKE 342

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISN---HSFLGAESLHNLNYWRYGDY 275
           G     ++  AVDL    + I            +I +    + +   +L  L Y +  + 
Sbjct: 343 GKYNPYTDEEAVDLIVKIKQILPKWVRTMRIQRDIPSTLIEAGVQKSNLGELVYNKLKE- 401

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW----LKMVRKNGHAVVEKE-FLSSEQQADEF 330
                  H           I  +K  + +     K+ +++ +A   +E FLS E + +E 
Sbjct: 402 -------HDINCQCIRCREIGHKKTSQEYSLDDFKLFKESYNACGGEETFLSIEDKNEES 454

Query: 331 LMMGLRLR 338
           +   LR R
Sbjct: 455 IAGFLRFR 462


>gi|164688435|ref|ZP_02212463.1| hypothetical protein CLOBAR_02080 [Clostridium bartlettii DSM
           16795]
 gi|164602848|gb|EDQ96313.1| hypothetical protein CLOBAR_02080 [Clostridium bartlettii DSM
           16795]
          Length = 314

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC  NS    +     + +     E++ M     P +    +F   T +      + +
Sbjct: 52  CTYCS-NSGSGDFAGNPASPLSEQFNEIKAMMHKKWPNAKYIAYFQAYTNTYAP---LNV 107

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + D   +  +  + + ++I   P  +E +      +        + LG+Q++ + + + +
Sbjct: 108 LKDKFEEALSFENVIGLSISTRPDCLEDDVVDYLAELNERTNLWVELGLQTIHDVTSKKI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  +   ++   ++   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRGHDYDTFLEGLKKLQDRNIKVVVHIINGLPGEDYNMMMETAKAVADMNVHGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + K T   +  +     L   +  ++L      I     +  
Sbjct: 228 VIKDTALARSLEKKQFELMDRDDYINLVCDQLEILPPEMIIH 269


>gi|294461454|gb|ADE76288.1| unknown [Picea sitchensis]
          Length = 574

 Score = 80.3 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 123/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+  + +  +++
Sbjct: 126 CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQT-RSRIDQLKR 184

Query: 65  LTGPRSISSIFFGGGTPSLIEPQ-------NIALILDG----------IAKNWTVSSNVE 107
           L            GGT   +          N+   L G               + +  + 
Sbjct: 185 LGHSVDKVEFILMGGTFMSLPADYRDYFTRNLHDALSGHTSSNVEEAVRYSEHSATKCIG 244

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA++ 
Sbjct: 245 LTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 304

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +     +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 305 GFKVVAHMMPDLPNVGVERDMESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 364

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIG 277
                   VD+     ++        Y +          S +   +L  L   R  D +G
Sbjct: 365 RNYPPEQLVDIIARVLALVPPWT-RVYRVQRDIPMPLVTSGVEKGNLRELALARMDD-LG 422

Query: 278 IGPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
           +      + +    R A   + H +     +++VR++  A    E FLS E    + L+ 
Sbjct: 423 L------KCRDVRTREAGIQDIHHKIKPEVVELVRRDYAANEGWETFLSYEDTRQDILVG 476

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 477 LLRLRK 482


>gi|157738290|ref|YP_001490974.1| hypothetical protein Abu_2087 [Arcobacter butzleri RM4018]
 gi|157700144|gb|ABV68304.1| conserved hypothetical protein, radical SAM domain protein
           [Arcobacter butzleri RM4018]
          Length = 320

 Score = 80.0 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 20/205 (9%)

Query: 32  CPYC---DF--------NSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIF 75
           C +C    F               ++ +  ++++ L +++       ++L     +    
Sbjct: 46  CSFCENDSFSPNLQEKRTKFKLNPRISENPYLENQLKQLEMQFFATKKRLENKFGVKKFI 105

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--- 132
               + +         +     K  +  + + ++I      +         +   ++   
Sbjct: 106 VYFQSFTN-TYAPFNTLKALYEKALSFDNVIGLSIGTRTDCMTDEILDFLVEKSKDKEIW 164

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           I  G+QS  +++L  + R    S     I   ++   ++   LIY LP +T        +
Sbjct: 165 IEYGIQSFFDETLVKINRGDTVSNMKYWIKRTKDRGLKVCGHLIYGLPNETQEMMLETFK 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
           + L   VD +  + L + K TL   
Sbjct: 225 QTLELEVDSIKFHPLYVVKNTLLTN 249


>gi|167945507|ref|ZP_02532581.1| hypothetical protein Epers_02845 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 280

 Score = 80.0 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 23/214 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
           C  +        C +C+  S     +  +     S   ++   R++   R        +F
Sbjct: 33  CPNRDGSKGIGGCTFCNNVSFSPNGRQPK-----SIAEQIAAGRRVVRKRTGAKKYLAYF 87

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI 133
              T +  + Q +  + D       V   + +++   P  V     +   GY+  G    
Sbjct: 88  QAYTNTYGDLQQLKSLYDSALAEPDV---IGLSVGTRPDCVPPAVLDLLAGYQAQGYEIW 144

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             LG+QS  + +L+ + R H  +E   +   AR    ++   LI  LP +  +     L+
Sbjct: 145 LELGLQSAFDTTLQRVNRGHGFAEYQESASAARARGLKLCTHLIAGLPGEQASHCHESLR 204

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           + L    D L L+ L + KGT      + G+   
Sbjct: 205 QVLEVGTDGLKLHPLHVVKGTQLANQWRRGEYTP 238


>gi|164658598|ref|XP_001730424.1| hypothetical protein MGL_2220 [Malassezia globosa CBS 7966]
 gi|159104320|gb|EDP43210.1| hypothetical protein MGL_2220 [Malassezia globosa CBS 7966]
          Length = 549

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 72/366 (19%), Positives = 131/366 (35%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + QS    +Q +R+
Sbjct: 97  CPHIALTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQS-RGRVQQLRE 155

Query: 65  LTGPRSISSIFFGGGTPSLIEP----QNIALILDGIAKNWTVSSN-------------VE 107
           L            GGT   +      + IA + + ++    +  +             + 
Sbjct: 156 LGHSVDKVEYIIMGGTFMSLSEQYRNEFIAQLHNALSGYTGLDVDEAVRYSERSQTKCIG 215

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H         HLA++ 
Sbjct: 216 ITIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFHLAKDA 275

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       +  D L LY   + +GT  Y++ + G  
Sbjct: 276 GYKVVAHMMPDLPNVGVERDMEQFKEYFENPAFRSDGLKLYPTLVIRGTGLYELWRTGRY 335

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAESLHNLNYW---RYGD 274
              + +  V   ++   I +        Y +     +     G E+  NL      R  D
Sbjct: 336 KNYTPSFLV---DIIARILALVPPWTRVYRVQRDIPMPLVSSGVEN-GNLREMALERMRD 391

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
           + G+        +VG H +   +   PE  ++ +R++  A    E FLS E    + L+ 
Sbjct: 392 F-GVTCRDVRYREVGIHEIHTKVR--PEE-IEFLRRDYTANGGWETFLSYEDPDRDILVA 447

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 448 LLRLRK 453


>gi|61657478|emb|CAI44390.1| hypothetical protein [Thermotoga sp. KOL6]
          Length = 397

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 25/252 (9%)

Query: 28  CVKKCPYCDFNSHVRR-----YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC   +   R           ++    +   + + +     S       G TP+
Sbjct: 149 CPFSCAYCQTPNIAGRVVRHRDVDVILHYANLGVKHGRKLARFIASNSFGYGSKNGVTPN 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQS 139
           +   + I  +L G+ +   +          E  P SV        +K   NR + +G QS
Sbjct: 209 V---EKIEELLFGLRR-VGIEEIYFGTFPSEVRPESVTDEVLSVIKKYVNNRSVVIGAQS 264

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++ L+ + R H   +   AI            D I+  P +T    E      +    
Sbjct: 265 GSDRVLKIIKRGHTVEQVEEAIEKIAAHGFTPHVDFIFGFPFETREDIEETFNFIVKIVN 324

Query: 200 DH---LSLYQLTIEKGTLFYK-------MHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +   +  +      GT  +              L   +    +D Y + Q   +     
Sbjct: 325 KYGAKIHAHTFMPLPGTELFNVGPGKLTKDHYKFLGRLASKGILDGYWMKQETLA---RK 381

Query: 250 AYEISNHSFLGA 261
            YEI+N S   A
Sbjct: 382 VYEIANSSRANA 393


>gi|95929525|ref|ZP_01312267.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95134222|gb|EAT15879.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 485

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 82/255 (32%), Gaps = 24/255 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R ++    ++       +Q +R+      I  I F     +     
Sbjct: 218 CPYACSYCDRSVFRRTFRYNSADY---LYRHLQHLRE---RYDIRHINFYDDQFTF---- 267

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++D   +       +          V+       ++AG   +SLG+++ + + L  
Sbjct: 268 HRQRVIDFCQRMIDQPLGMTFNCAIRAEHVDDELIALMKRAGCWMMSLGIETGDPELLAQ 327

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +N +       I L +    R+   ++  LP ++       +   L   +D L++ + 
Sbjct: 328 HRQNPDLDMLANTIRLIKKHGIRVKGLMMVGLPGESEQSVRRSIDYILKLPIDDLNVAKF 387

Query: 208 TIEKGTLFYKMHKDGDLV------LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           T   G+  Y+   +  +       +         + +++       L  Y          
Sbjct: 388 TPFPGSPLYENIHELGVFDEDWAKMDCMRFQFIPHGMSEEKLEELFLTFY--------KK 439

Query: 262 ESLHNLNYWRYGDYI 276
               N   W Y   +
Sbjct: 440 HFRRNDVIWGYVTML 454


>gi|222445135|ref|ZP_03607650.1| hypothetical protein METSMIALI_00754 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434700|gb|EEE41865.1| hypothetical protein METSMIALI_00754 [Methanobrevibacter smithii
           DSM 2375]
          Length = 554

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 23/248 (9%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T E  P   +  +       GV R+ LGVQ+L ++    + R H  ++ I +  L 
Sbjct: 224 CVGMTFETRPDYCKKEHINRMLDFGVTRVELGVQTLSDELYTKIKRGHTIADVIESNTLL 283

Query: 165 RNIFPRMSFDLIYALP---KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   +++  ++  L     + +  ++  L    ++  D L +Y   + KG+  Y + K+
Sbjct: 284 RDSAVKVAMHMMPGLFVSPDEDLNMFKK-LFSDDNFKPDMLKIYPCLVTKGSELYDLWKE 342

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISN---HSFLGAESLHNLNYWRYGDY 275
           G     ++  AVDL    + I            +I +    + +   +L  L Y +  + 
Sbjct: 343 GKYNPYTDEEAVDLIVKIKQILPKWVRTMRIQRDIPSTLIEAGVQKSNLGELVYNKLEE- 401

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW----LKMVRKNGHAVVEKE-FLSSEQQADEF 330
                  H           I  +K  + +     K+ +++ +A   +E FLS E + +E 
Sbjct: 402 -------HDINCQCIRCREIGHKKTSQEYSLDDFKLFKESYNACGGEETFLSIEDKNEES 454

Query: 331 LMMGLRLR 338
           +   LR R
Sbjct: 455 IAGFLRFR 462


>gi|327313394|ref|YP_004328831.1| radical SAM protein [Prevotella denticola F0289]
 gi|326944665|gb|AEA20550.1| radical SAM protein, TIGR01212 family [Prevotella denticola F0289]
          Length = 312

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 17/215 (7%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCD    + +     + F      +M+++            +F   T +         + 
Sbjct: 55  YCDNGKSITQQLEDGKQFFSRKYPDMKYLA-----------YFQAYTNTYGSN---NRLK 100

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
               +   V   V + I   P  +     + F+   +     +  GV++  + +LR + R
Sbjct: 101 ALYEEALAVEDVVGLVIGTRPDCINDTLLDYFEELNRRTFLIVEYGVETCNDGTLRLINR 160

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ + A  AI        R    +I  LP +   +   +     S  +  L ++QL I 
Sbjct: 161 GHDFACARQAIEKTARRGIRTGAHIILGLPGEDAEESLRQAPIISSLPLTTLKIHQLQII 220

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +GT   KM+ D    L +    + L      +   
Sbjct: 221 RGTRLAKMYADHPFHLYTVEEYIRLIAAYIRLLRP 255


>gi|188585210|ref|YP_001916755.1| conserved hypothetical radical SAM protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179349897|gb|ACB84167.1| conserved hypothetical radical SAM protein [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 325

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 88/251 (35%), Gaps = 36/251 (14%)

Query: 23  VHWPF-CVKK--------CPYCD-----F----NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           ++ P  C  +        C +CD     F    NS   + +V +           ++  +
Sbjct: 33  INLPGTCPNRDGVMGEEGCIFCDEEGSGFDCLPNSMAIKEQVAKNK---------EYFGK 83

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               +    ++F   + +          L   A++  +   V I++   P  +       
Sbjct: 84  RFKAKKFI-VYFQAFSNTYWPLDKFKEFLWSAAEDQDL---VGISVSTRPDCINEAYLDV 139

Query: 125 YRK--AGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
             +     N    + LG+Q++  ++L+++ R H  +E + A+   +         LI  L
Sbjct: 140 LEEIHHEFNLDIDVELGLQTVNYKTLQYINRGHTLAEFLDAMWRIKQRGFSTCIHLILNL 199

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P  ++       +   +   D + ++ L + +GT   +++K  +L + S    V+     
Sbjct: 200 PGDSLEDIVESAKIMSAVNADQIKIHSLYVVEGTKLGELYKKDELNIISLTEYVNRVITF 259

Query: 240 QSITSAHGLHA 250
               S   +  
Sbjct: 260 LEYLSPQIVVQ 270


>gi|170109599|ref|XP_001886006.1| histone acetyltransferase, GCN5 superfamily [Laccaria bicolor
           S238N-H82]
 gi|164638936|gb|EDR03210.1| histone acetyltransferase, GCN5 superfamily [Laccaria bicolor
           S238N-H82]
          Length = 556

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 131/367 (35%), Gaps = 64/367 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF+   + Y   +   +++              ++ ++ L
Sbjct: 100 CPHIAMTGNICVYCPGGPDSDFDYSTQSYTGYEPTSMRAIRARYDPYEQTRGRVEQLKSL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVEI 108
                       GGT   +        IA + +                   + S  + I
Sbjct: 160 GHNVDKVEFIVMGGTFMSMPEDYRGKFIAQLHNALSGFTGTDVDEAVRYSEQSKSKAIGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + HLA++  
Sbjct: 220 TIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHLAKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 280 FKVVAHMMPDLPNVGVERDLEQFKEYFENPAFRSDGLKIYPTLVIRGTGLYELWRTGRYK 339

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAESLHNLNYW---RYGDYIG 277
             + NV VD+     ++        Y +     L     G E+  NL      R  D+  
Sbjct: 340 NYTPNVLVDVVARILALVPPWT-RVYRVQRDIPLPLVTSGCENSGNLRELALNRMKDF-- 396

Query: 278 IGPGAHSR----VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
              GA  R     +VG H +   +   PE+ ++++R++  A    E FLS E    + L+
Sbjct: 397 ---GAVCRDVRFREVGIHEIHHKVR--PEA-VELLRRDYTANGGWETFLSYEDPEKDILV 450

Query: 333 MGLRLRE 339
             LRLR+
Sbjct: 451 GLLRLRK 457


>gi|323346201|gb|EGA80491.1| Elp3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 542

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 69/379 (18%), Positives = 129/379 (34%), Gaps = 67/379 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 166

Query: 65  LTGP-RSISSIFFGGGTPSLIE------PQNIALILDGI-------------AKNWTVSS 104
           L      +  +  GG   + +          I  + + +                 +++ 
Sbjct: 167 LGHSIDKVEYVLMGG---TFMSLPKEYREDFIVKLHNALSGFNGNDIDEAILYSQQSLTK 223

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     K G  R+ +GVQSL E   R   R H          ++
Sbjct: 224 CVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFAVS 283

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K 
Sbjct: 284 KDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWKT 343

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRY 272
           G     S N  V   +L   I +        Y +          S +   +L  L   R 
Sbjct: 344 GRYKSYSANALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARM 400

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
            D +G         +VG   V   ++      ++++R++ +A    E FLS E    + L
Sbjct: 401 KD-LGTTCRDVRTREVGIQEVHHKVQPDQ---VELIRRDYYANGGWETFLSYEDPKKDIL 456

Query: 332 MMGLRLREGISVKDWEMLA 350
           +  LRLR+      +    
Sbjct: 457 IGLLRLRKASKKYTYRKEF 475


>gi|21228076|ref|NP_633998.1| histone acetyltransferase [Methanosarcina mazei Go1]
 gi|20906512|gb|AAM31670.1| histone acetyltransferase [Methanosarcina mazei Go1]
          Length = 555

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 95/263 (36%), Gaps = 20/263 (7%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           NV IT E  P      +   + + G  ++ +GVQS+ +  L  + R H  +E + A  + 
Sbjct: 223 NVGITFETRPDWAREEHVDEFLRLGGTKVEIGVQSVYDFVLSRMQRGHGVAEIVRANRVL 282

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP           ++      +  D+L +Y   + +GT  Y+M K 
Sbjct: 283 RDSAFKVGFHMMPHLPGADSELDLRGFKKLFDDQRFRPDYLKIYPTLVTEGTPLYRMWKS 342

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL-------NYWR 271
           G+    S+  A +L    +++            +I  H         NL          +
Sbjct: 343 GEYQALSDEEAAELVADIKAVLPKWVRLQRIQRDIPAHQIFAGVRKSNLRQLAEEKLREK 402

Query: 272 YGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFL 331
            G    I         +   R+    EK  E     V        ++ F++ E  + + L
Sbjct: 403 GGKCRCIRCREVGHNSLKGRRI---NEKDIEL---TVESYEACNGKEHFIAFEDLSADVL 456

Query: 332 MMGLRLREGISVKDWEMLAGRNL 354
           +   RLR        E L G  L
Sbjct: 457 IGFTRLRFPAEPHR-EELQGSAL 478


>gi|258514850|ref|YP_003191072.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257778555|gb|ACV62449.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 488

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 89/239 (37%), Gaps = 16/239 (6%)

Query: 28  CVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C YC  + ++ R  +    +++      ++W++Q+     ++ I+F       +  
Sbjct: 209 CNYRCDYCAESLTYGRGVRFHSPDYV------IEWIKQVRKDYRVNGIYFHDND--FLIY 260

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +N +  +     +  +S  ++  I+   + ++ +  +  ++AG   + +GV++  ++ L 
Sbjct: 261 ENRSREICERIISAGLSGKIKWAIQTRVNRLKPDMIKLLKRAGCILVEVGVEAASQRELD 320

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +         AI L RN    +   ++ AL  + +   E  +Q            + 
Sbjct: 321 LVNKQTTVYANEQAIALCRNEGISIHAYMLTALEGEIIKDLEQRIQWVKRVKPSTFDWHP 380

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-------GLHAYEISNHSF 258
           L I  GTL Y+   DG            +    +   S          +  Y I  H  
Sbjct: 381 LKIHPGTLLYQKKGDGFFEASEWTEENIVNYYKKDTLSCISQEKRREWMKRYYIRYHKR 439


>gi|238758291|ref|ZP_04619469.1| hypothetical protein yaldo0001_1780 [Yersinia aldovae ATCC 35236]
 gi|238703414|gb|EEP95953.1| hypothetical protein yaldo0001_1780 [Yersinia aldovae ATCC 35236]
          Length = 300

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 82/232 (35%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   Q    ++    +     +    +F   T +      +  
Sbjct: 45  CTFCNVASFA-----DEQMQQQGIAQQLAEQAKKANRANRYLAYFQAYTSTY---AEVNT 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +          +  V + +   P  V     +   GY++ G      LG+Q+  +++L+ 
Sbjct: 97  LAAMYELALAEADIVGLCVGTRPDCVPDAVLDLLSGYQQQGYEVWLELGLQTANDKTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   Q    L   +   VD + L+ L
Sbjct: 157 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGENQVQCMETLDNVVVTGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L  L  E+  +    + +   +    H   IS  + 
Sbjct: 217 HIVEGSTMGKAWRAGRLSELALEDYVLIAGEMIRHTPAEIVYHR--ISASAR 266


>gi|76802078|ref|YP_327086.1| protein acetyltransferase [Natronomonas pharaonis DSM 2160]
 gi|76557943|emb|CAI49527.1| probable protein acetyltransferase [Natronomonas pharaonis DSM
           2160]
          Length = 552

 Score = 80.0 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 71/199 (35%), Gaps = 6/199 (3%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M      + P       F    P  ++ + +  ++     
Sbjct: 162 TMTARSHDYQEWFVKRALEAMNDYDLDSPPAPSEEDSFKP-DPEDVDFRYLEDVIAENET 220

Query: 99  NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
                 N+  T E  P   +        + G  ++ +GVQ+  E+  R + R H    ++
Sbjct: 221 ANIR--NIGTTFETKPDWCDPEQIDRMLRLGGTKVEVGVQTTYERINREMHRGHGVQASL 278

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLF 215
            A    R+   ++ F ++   P  +      + +       +  D+L +Y   I + T+ 
Sbjct: 279 DANRRLRDAGFKVGFHMMPGQPGMSKEMCLQDFREIFENADWRPDYLKIYPTLIVRDTVT 338

Query: 216 YKMHKDGDLVLPSENVAVD 234
           Y M +  +    +   A +
Sbjct: 339 YDMWRRDEYEPLNNEEAAE 357


>gi|169852658|ref|XP_001833011.1| histone acetyltransferase [Coprinopsis cinerea okayama7#130]
 gi|116505805|gb|EAU88700.1| histone acetyltransferase [Coprinopsis cinerea okayama7#130]
          Length = 554

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 131/367 (35%), Gaps = 64/367 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF+   + Y   +   +++              ++ ++ L
Sbjct: 100 CPHIAMTGNICVYCPGGPDSDFDYSTQSYTGYEPTSMRAIRARYDPYEQTRGRVEQLKSL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTV-------------SSNVEI 108
                       GGT   +        IA + + ++                  S  + I
Sbjct: 160 GHSVDKVEFIVMGGTFMSMPEDYREKFIAQLHNALSGYTGTNVDEAVRFSEQSKSKAIGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H         HLA++  
Sbjct: 220 TIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSECFHLAKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +   + +       +  D L LY   + +GT  Y++ + G   
Sbjct: 280 FKVVAHMMPDLPNVGIERDLEQFKEYFENPAFRSDGLKLYPTLVIRGTGLYELWRTGRYK 339

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAESLHNLNYW---RYGDYIG 277
             + NV VD+     ++        Y +     L     G ++  NL      R  D+  
Sbjct: 340 NYTPNVLVDVVARILALVPPWT-RVYRVQRDIPLPLVTSGCDNSGNLRELALNRMKDF-- 396

Query: 278 IGPGAHSR----VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
              GA  R     +VG H +   +   PES ++++R++  A    E FLS E    + L+
Sbjct: 397 ---GAVCRDVRFREVGIHEIHHKVR--PES-VELLRRDYTANGGWETFLSYEDPEKDILI 450

Query: 333 MGLRLRE 339
             LRLR+
Sbjct: 451 GLLRLRK 457


>gi|124486123|ref|YP_001030739.1| hypothetical protein Mlab_1304 [Methanocorpusculum labreanum Z]
 gi|124363664|gb|ABN07472.1| histone acetyltransferase, ELP3 family [Methanocorpusculum
           labreanum Z]
          Length = 520

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 3/149 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            +  T E  P      +     + GV ++ LG Q  +++ L    R H  ++++ A  L 
Sbjct: 198 CIATTFETRPDWCREEHINKMLELGVTKVELGFQHTDDELLLLNKRGHTVADSVLANTLL 257

Query: 165 RNIFPRMSFDLIYALPKQT---MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  L   T     +    L     +  D L +Y   +  G    ++ + 
Sbjct: 258 RDAGIKVGFHVMPNLYGSTIPRDREMFDTLFTDPRFCPDFLKIYPTLVTPGAELEELWQK 317

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           G+     E+  VDL    +S    +    
Sbjct: 318 GEYKTYDEDDLVDLLAYAKSRLPPYVRLQ 346


>gi|156052232|ref|XP_001592077.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154705301|gb|EDO05040.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 581

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 134/423 (31%), Gaps = 73/423 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 120 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 179

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTVSS----------NVEI 108
                       GGT   +           +   L G   N    +           V I
Sbjct: 180 GHSVDKVEYIIMGGTFMSLSESYRDGFISQLHNALSGYQGNNVDEAVQAGEMSNIKCVGI 239

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 240 TIETRPDYCLQPHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 299

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 300 FKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 359

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 360 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 415

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 416 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANKGWETFLAYEDPKQDILIGLLRL 474

Query: 338 REGISVKDWE-MLAGRNLDIECE---------------RNLQRQGF--IERVQFSRLRCT 379
           R+  S   +   L G+   I  E               R  Q QG+  +   +  R+   
Sbjct: 475 RKCSSTHTFRPELTGQPTSIIRELHVYGSAVPVHARDPRKFQHQGYGTLLMEEAERIARN 534

Query: 380 QRG 382
           + G
Sbjct: 535 EHG 537


>gi|108809738|ref|YP_653654.1| hypothetical protein YPA_3747 [Yersinia pestis Antiqua]
 gi|108781651|gb|ABG15709.1| hypothetical protein YPA_3747 [Yersinia pestis Antiqua]
          Length = 316

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 14/231 (6%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F           +    +    +Q  +     R ++  +F   T +      +  +  
Sbjct: 52  CTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLA--YFQAYTSTY---AEVNALAA 106

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRFLGR 150
              +    +  V + +   P  V           ++ G      LG+Q+  +++L+ + R
Sbjct: 107 MYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINR 166

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L I 
Sbjct: 167 GHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIV 226

Query: 211 KGTLFYKMHKDGDLV---LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +G+   K  + G L    L  E+  +    + +   +    H   IS  + 
Sbjct: 227 EGSTMAKAWRAGRLTALALALEDYVLTAGEMIRHTPAEVVYHR--ISASAR 275


>gi|284165974|ref|YP_003404253.1| histone acetyltransferase, ELP3 family [Haloterrigena turkmenica
           DSM 5511]
 gi|284015629|gb|ADB61580.1| histone acetyltransferase, ELP3 family [Haloterrigena turkmenica
           DSM 5511]
          Length = 553

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 56/141 (39%), Gaps = 3/141 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           N+  T E  P   +          G  ++ +GVQ+  E+  R + R H   E++ A    
Sbjct: 227 NIGTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGVQESMEANQRL 286

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++   P  +      + +R      +  D+L +Y   I +GT  Y    +
Sbjct: 287 RDSAFKVGFHMMPGQPGMSKEMCLEDFRRIFEAEAWKPDYLKIYPTLIVRGTATYDWWHN 346

Query: 222 GDLVLPSENVAVDLYNLTQSI 242
           G+      + A +L    + +
Sbjct: 347 GEFDPLDNDEAAELVAEIKDM 367


>gi|117621140|ref|YP_857210.1| radical SAM protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562547|gb|ABK39495.1| radical SAM protein, family [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 311

 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 96/273 (35%), Gaps = 27/273 (9%)

Query: 2   KYLSAYENNM---TGQGSNSLGVYVHWPF-CVKK--------CPYCDFNSHVRRYKVGQE 49
           + ++ +  ++    GQ  + L   +H  F C  +        C +C+  S        Q 
Sbjct: 5   ELVNTFGQDLKQRHGQKIHKLS--IHGAFTCPNRDGTLGRGGCTFCN-VSSFADESAQQL 61

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
           + +Q  L      R           +F   T +  E + +  + +       VS  V + 
Sbjct: 62  SVVQQLL----ARRDEVTRAKRYLAYFQAYTSTYAEVEYLQRMYEEALS---VSDMVGLC 114

Query: 110 IEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +   P  V                   + LG+QS  +++L+ + R H  +    A+  A 
Sbjct: 115 VGTRPDCVPDAVLDLLAGYQARGYEVWLELGLQSANDKTLQRINRGHGYAAYADAVARAH 174

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
               ++   LI  LP +        LQR +   V+ + L+ L + +G+   K  + G L 
Sbjct: 175 QRGIKVCAHLIVGLPGEVAMDSLNTLQRIVETGVEGIKLHPLHVVEGSTLGKAWQAGRLE 234

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +PS    V+        T    ++   IS  + 
Sbjct: 235 VPSLAQYVEAAVAMIQHTPPEVVYH-RISASAR 266


>gi|313228040|emb|CBY23190.1| unnamed protein product [Oikopleura dioica]
          Length = 552

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 76/239 (31%), Gaps = 42/239 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   +SI
Sbjct: 103 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRVEQLKSI 162

Query: 72  SS------IFFGGGTPSLIEPQ-------NIALILDGIAKN----------WTVSSNVEI 108
                       GGT   +  +       N+   L G   +           + S  V I
Sbjct: 163 GHSTDKVEFIVMGGTFMALPVEYRDFFIRNLHDALSGHRSHSVDEAVRYSERSRSKCVGI 222

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H       + H++++  
Sbjct: 223 TIETRPDYCLKKHLSDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMSKDAG 282

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ +    
Sbjct: 283 FKIVAHMMPDLPNVDLERDLEQFVEFFENPAFRPDGLKIYPTLVIRGTGLYELWRTERY 341


>gi|73748451|ref|YP_307690.1| ELP3 family histone acetyltransferase [Dehalococcoides sp. CBDB1]
 gi|73660167|emb|CAI82774.1| histone acetyltransferase, ELP3 family [Dehalococcoides sp. CBDB1]
          Length = 459

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 78/249 (31%), Gaps = 37/249 (14%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-----------GPRSISSIF 75
           C  KC YC  F +  + Y       +++   E Q  +Q+                +  I 
Sbjct: 23  CPGKCIYCPTFAATPQSYTPESPAVLRAKSCEYQAYKQVALRLRIIQDMGHPTDKVELII 82

Query: 76  FGGGTPSLIEPQ---NIALILDGIAKNWTV----------------SSNVEITIEANPSS 116
            GG   + +          I D       V                   V + IE  P  
Sbjct: 83  MGG---TFLSADITYQYGFIKDCYDALNGVVAGSLEEAKTINETAQHRCVGLCIETRPDI 139

Query: 117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI 176
                 Q     G  R+ LGVQ L++   + + R H  S+   A  L R    ++ +  +
Sbjct: 140 CGKAEIQRMIDFGTTRVELGVQMLDDDIYKLVERGHRVSDVAEATCLLREYGLKVHYHWM 199

Query: 177 YALPKQTMTQ---WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             LP  +  +       +     +  D L LY   + +GT+  +  K+G           
Sbjct: 200 PGLPGSSPEKDLALSRMVFEDPRFCPDGLKLYPTMVVEGTILEQWWKEGRYTPYPNGTMT 259

Query: 234 DLYNLTQSI 242
            L    +++
Sbjct: 260 GLIADIKAL 268


>gi|222479901|ref|YP_002566138.1| histone acetyltransferase, ELP3 family [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452803|gb|ACM57068.1| histone acetyltransferase, ELP3 family [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 585

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 102/341 (29%), Gaps = 16/341 (4%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P       F    P   E + +  ++     
Sbjct: 184 TMTARSHDYQEWFVKRALQAMNDYDLDKEPEPAEGESFAPA-PEETEFEYLEDVIAENET 242

Query: 99  NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI 158
           N     N+  T E  P   +          G  ++ +GVQ+  E+  R + R H    + 
Sbjct: 243 NEIR--NIGTTFETKPDWCDPEQIDRMLDLGGTKVEVGVQTTYERINREMHRGHGNEASR 300

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLF 215
            A    R+   ++ F ++   P  T      + ++      +  D+L +Y   + +GT  
Sbjct: 301 NANRHLRDAAFKVGFHMMPGQPGMTREMCVEDFRQIFENPDWRPDYLKIYPTLVVEGTRV 360

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQS---ITSAHGLHAYEISNHSFLGAESLHNL--NYW 270
           Y   +       S   A D+           +       +I      G     NL     
Sbjct: 361 YDRWRQDSFEPLSNEEAADVVADAMDQIPKYTRLQRVQRDIPADFIEGGVWKSNLRQLAD 420

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
           +  +  GI      R            +  P+     V         + F+S E    + 
Sbjct: 421 QRAEEKGI----VQRDIRAREVGHNDADPDPDDVELDVLTYEAGGGTEHFISFEDPVRDL 476

Query: 331 LMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERV 371
           L+   RLR      D     G   D    R L+    I  +
Sbjct: 477 LVGFCRLRFPSFAPDQPGAPGTE-DDPIRRELEDAALIREL 516


>gi|298482084|ref|ZP_07000272.1| radical SAM protein, family [Bacteroides sp. D22]
 gi|298271641|gb|EFI13214.1| radical SAM protein, family [Bacteroides sp. D22]
          Length = 326

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKSITTQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  TV   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 103 LKRKYEEALTVDGVVGLVIGTRPDCMPESLLRYLEELNKHTFLMVEYGIESTCDETLKRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T      + +      +  L ++QL 
Sbjct: 163 NRGHTYADTVEAVRRTAACGILTGGHIILGLPGETHDTMVAQAEILSDLPLATLKIHQLQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     + +        N   +  +L       
Sbjct: 223 LIRGTRMAHEYDEAPDGFHLFNEVEEYIDLVIDYVEH 259


>gi|295086688|emb|CBK68211.1| radical SAM protein, TIGR01212 family [Bacteroides xylanisolvens
           XB1A]
          Length = 324

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E +       P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKSITTQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  TV   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 101 LKRKYEEALTVDGVVGLVIGTRPDCMPESLLRYLEELNKHTFLMVEYGIESTCDETLKRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T      + +      +  L ++QL 
Sbjct: 161 NRGHTYADTVEAVRRTAACGILTGGHIILGLPGETHDTMVAQAEILSDLPLATLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     + +        N   +  +L       
Sbjct: 221 LIRGTRMAHEYDEAPDGFHLFNEVEEYIDLVIDYVEH 257


>gi|212535698|ref|XP_002148005.1| histone acetyltransferase, putative [Penicillium marneffei ATCC
           18224]
 gi|210070404|gb|EEA24494.1| histone acetyltransferase, putative [Penicillium marneffei ATCC
           18224]
          Length = 570

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 124/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 176

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        I+ + + ++   T + +             V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPEDYRNSFISQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 237 TIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   +         +  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLDQFVEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 357 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 412

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 413 GTTCRDVRTREVGINEVKNKIRPSQ-IELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 471

Query: 338 REGISVKDWE-MLAGR 352
           R+  +   +   L G+
Sbjct: 472 RKCSATHTFRPELTGQ 487


>gi|6325171|ref|NP_015239.1| Elp3p [Saccharomyces cerevisiae S288c]
 gi|74676324|sp|Q02908|ELP3_YEAST RecName: Full=Elongator complex protein 3; AltName:
           Full=Gamma-toxin target 3
 gi|1151240|gb|AAB68213.1| Ypl086cp [Saccharomyces cerevisiae]
 gi|151942711|gb|EDN61057.1| RNA polymerase II Elongator subunit [Saccharomyces cerevisiae
           YJM789]
 gi|190407869|gb|EDV11134.1| RNA polymerase II Elongator subunit [Saccharomyces cerevisiae
           RM11-1a]
 gi|256269974|gb|EEU05225.1| Elp3p [Saccharomyces cerevisiae JAY291]
 gi|259150072|emb|CAY86875.1| Elp3p [Saccharomyces cerevisiae EC1118]
 gi|285815455|tpg|DAA11347.1| TPA: Elp3p [Saccharomyces cerevisiae S288c]
 gi|323302750|gb|EGA56556.1| Elp3p [Saccharomyces cerevisiae FostersB]
 gi|323335053|gb|EGA76343.1| Elp3p [Saccharomyces cerevisiae Vin13]
          Length = 557

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 128/376 (34%), Gaps = 61/376 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 166

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGI-------------AKNWTVSSNVE 107
           L            GGT   +  +     I  + + +                 +++  V 
Sbjct: 167 LGHSIDKVEYVLMGGTFMSLPKEYREDFIVKLHNALSGFNGNDIDEAILYSQQSLTKCVG 226

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQSL E   R   R H          ++++ 
Sbjct: 227 ITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFAVSKDA 286

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 287 GYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWKTGRY 346

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S N  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 347 KSYSANALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARMKD- 402

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G         +VG   V   ++      ++++R++ +A    E FLS E    + L+  
Sbjct: 403 LGTTCRDVRTREVGIQEVHHKVQPDQ---VELIRRDYYANGGWETFLSYEDPKKDILIGL 459

Query: 335 LRLREGISVKDWEMLA 350
           LRLR+      +    
Sbjct: 460 LRLRKASKKYTYRKEF 475


>gi|163796738|ref|ZP_02190696.1| tRNA 2-methylthioadenosine synthase-like protein [alpha
           proteobacterium BAL199]
 gi|159177992|gb|EDP62539.1| tRNA 2-methylthioadenosine synthase-like protein [alpha
           proteobacterium BAL199]
          Length = 430

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-----ISSIFFGG---G 79
           C  +C +C            +   I + + +++ +    G R      +    FGG   G
Sbjct: 150 CDHRCTFC---IIPYGRGNSRSVPIGAIVEQVRALAA-GGYREIVLTGVDVTSFGGDLPG 205

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            PSL   Q +  +L  + +   +          +P  ++ + F+        +  + L +
Sbjct: 206 RPSL--GQMMRRLLALVPELERLR-----LSSVDPVEIDEDLFRLIADEPRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   +    +    A         D+I   P ++   +E       
Sbjct: 259 QAGDDMVLKRMKRRHLRDDVFRLVERVRALRPGTAFGADVIAGFPTESDAMFENTAALLT 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +   GT   +M +
Sbjct: 319 DLGIQHLHVFPYSPRPGTPAARMPQ 343


>gi|313203239|ref|YP_004041896.1| hypothetical protein Palpr_0757 [Paludibacter propionicigenes WB4]
 gi|312442555|gb|ADQ78911.1| conserved hypothetical protein [Paludibacter propionicigenes WB4]
          Length = 318

 Score = 79.6 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    Y    +   Q     + + +           +F   T +      +  
Sbjct: 53  CTYCNNQSFSPEYCKPIKTVSQQVEEGINFFKHKYEN-QFYLAYFQSYTNTYDSLDKLKA 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I +    +  V     I +   P  V       F+   K+    I  G++S  +++L F+
Sbjct: 112 IYEEALSHPQVKG---IVVGTRPDCVNDELLDYFEELSKSVYVMIEYGIESTNDETLEFI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R HN + A  AI        +    LI  LP++          +     +  + L+QL 
Sbjct: 169 NRGHNYACAEEAIRSTAKRGIKTGAHLILGLPREDSETVLSHADKISKLPLTAIKLHQLQ 228

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + + T+  K + +             +  L   I   +   A E
Sbjct: 229 LIRKTVMAKQYIEHPEWFNLYTANEYIDLLIDFIERLNPEIAIE 272


>gi|260948524|ref|XP_002618559.1| hypothetical protein CLUG_02018 [Clavispora lusitaniae ATCC 42720]
 gi|238848431|gb|EEQ37895.1| hypothetical protein CLUG_02018 [Clavispora lusitaniae ATCC 42720]
          Length = 542

 Score = 79.6 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 124/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    +  +R 
Sbjct: 95  CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRIDQLRS 153

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVE 107
           L            GGT   +  +     IA + + ++                     V 
Sbjct: 154 LGHSIDKVEYIVMGGTFMSLPVEYREHFIAQLHNALSGYSGTDLTESIRFSQQAQTKCVG 213

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 214 ITIETRPDYCTETHLSDMLTYGCTRLEVGVQSVYEDVARDTNRGHTVKAVCETFAVAKDA 273

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 274 GYKVVSHMMPDLPNVGMERDLQQFVEYFENPEFRTDGLKIYPTLVIRGTGLYELWKRGLY 333

Query: 225 VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIG 277
              S N  VDL     ++        Y +     +     G E  +L  L   R  D   
Sbjct: 334 KSYSANALVDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD--- 389

Query: 278 IGPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
            G    S   V +  V I    H   P+  ++++R++ +A    E FLS E    + L+ 
Sbjct: 390 FG---TSCRDVRTREVGIQEVHHKVAPDQ-VELIRRDYYANGGWETFLSYEDPKQDILIG 445

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 446 LLRLRK 451


>gi|218883439|ref|YP_002427821.1| histone acetyltransferase, ELP3 family [Desulfurococcus
           kamchatkensis 1221n]
 gi|218765055|gb|ACL10454.1| histone acetyltransferase, ELP3 family [Desulfurococcus
           kamchatkensis 1221n]
          Length = 491

 Score = 79.6 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 3/128 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V +TIE  P      +       G  ++ LGVQS+ +  L  + R H+  + I +  + R
Sbjct: 157 VGLTIETRPDYGRERHADEMLHYGATKVELGVQSIYDDVLEIVRRGHSVKDTIESTRILR 216

Query: 166 NIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  LP        +   EL     +  D L +Y   + +GT  Y   K+G
Sbjct: 217 DAGFKICYHIMLGLPGSNPDRDLEMVKELFTNPDFRPDMLKIYPTEVIEGTTLYTWWKEG 276

Query: 223 DLVLPSEN 230
                S+ 
Sbjct: 277 KYKPYSDE 284


>gi|242241031|ref|YP_002989212.1| hypothetical protein Dd703_3632 [Dickeya dadantii Ech703]
 gi|242133088|gb|ACS87390.1| conserved hypothetical protein [Dickeya dadantii Ech703]
          Length = 317

 Score = 79.6 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +     S   ++          +    +F   T +      + +
Sbjct: 50  CTFCNVASFADEQMQQR-----SIAEQLASQAGKINRANRYLAYFQAYTSTY---AEVQV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +  + YR+ G      LG+QS  +++L  
Sbjct: 102 LSSMYQQALQQADMVGLCVGTRPDCVPDAVLDLLESYREQGYEVWLELGLQSAHDRTLHR 161

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +      M L R     V+ + L+ L
Sbjct: 162 INRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDKRACLMTLDRVADTGVEGIKLHPL 221

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + +G++  K  + G L   S +  V +       T    ++   IS  + 
Sbjct: 222 HVVEGSIMAKAWRAGRLTALSLDEYVGIAGEMIRHTPPSIVYH-RISASAR 271


>gi|305664219|ref|YP_003860507.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
 gi|304378788|gb|ADM28627.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
          Length = 436

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 79/234 (33%), Gaps = 20/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C        Y V +   I+   + +E+     L   R I+    G G+ + I+
Sbjct: 179 CSASCYFC---QVTYLYGVPRYRSIERIVYYSEIMLSSGLKDLRFIAPNSLGYGSSNGIK 235

Query: 86  PQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQS 139
           P       +  +     +            E  P SVE +  +  R+   N RI +G QS
Sbjct: 236 PDSKVLDLLHQLRLLANRYGGRIFFGTFPSEVRPDSVEEDFIREIRRFVDNKRIIVGAQS 295

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA- 198
              + L+ + R H + + + A+ +       +  DLI+  P +T    E  ++       
Sbjct: 296 GSNRILKIIHRGHTSEDIVNAVQILTKYGFEVDIDLIFGFPFETKDDIEETMKLIEKLKE 355

Query: 199 -VDHLSLYQLTIEKGTLFYKMHK-------DGDLVLPSENVAVDLYNLTQSITS 244
                 L+      GT F K+            L           Y ++Q   S
Sbjct: 356 YRTRFHLHTFIPLPGTPFIKLLPSPIDDALKHRLYKLIGEGRAYGYWISQEKLS 409


>gi|332828280|gb|EGK00992.1| TIGR01212 family radical SAM protein [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 307

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 78/231 (33%), Gaps = 27/231 (11%)

Query: 24  HWPF------------CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           H+PF            C  +        C YC+  S    Y   Q +        + +  
Sbjct: 16  HFPFKVQKISINAGFTCPNRDGSKAVGGCTYCNNQSFSPGYGGKQRSVSDQLRDGIAFFS 75

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
               P      +F   T +     +I  ++    +  + S  V + I   P  +      
Sbjct: 76  -YKYPEMKYLAYFQSYTNTY---DSIDKLISLYEEALSYSGVVGLIIGTRPDCMPDELLD 131

Query: 124 GYRKAG---VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP 180
            + +        I  G++S  + +L F+ R H  +E++ AIH            LI  LP
Sbjct: 132 YFAELNKRTFLVIEYGLESTLDSTLEFINRGHTHAESVDAIHKTAAKGIYTGAHLILGLP 191

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            ++  Q            +  L L+QL + KGT+  K +++        +V
Sbjct: 192 NESRDQILAHADEVSKLPLTTLKLHQLQLIKGTVMAKQYREYPEWFNLFDV 242


>gi|323352025|gb|EGA84564.1| Elp3p [Saccharomyces cerevisiae VL3]
          Length = 554

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 128/376 (34%), Gaps = 61/376 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 105 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 163

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGI-------------AKNWTVSSNVE 107
           L            GGT   +  +     I  + + +                 +++  V 
Sbjct: 164 LGHSIDKVEYVLMGGTFMSLPKEYREDFIVKLHNALSGFNGNDIDEAILYSQQSLTKCVG 223

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQSL E   R   R H          ++++ 
Sbjct: 224 ITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFAVSKDA 283

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G  
Sbjct: 284 GYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWKTGRY 343

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S N  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 344 KSYSANALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARMKD- 399

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G         +VG   V   ++      ++++R++ +A    E FLS E    + L+  
Sbjct: 400 LGTTCRDVRTREVGIQEVHHKVQPDQ---VELIRRDYYANGGWETFLSYEDPKKDILIGL 456

Query: 335 LRLREGISVKDWEMLA 350
           LRLR+      +    
Sbjct: 457 LRLRKASKKYTYRKEF 472


>gi|41614944|ref|NP_963442.1| hypothetical protein NEQ148 [Nanoarchaeum equitans Kin4-M]
 gi|40068668|gb|AAR39003.1| NEQ148 [Nanoarchaeum equitans Kin4-M]
          Length = 444

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 82/264 (31%), Gaps = 33/264 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTP-S 82
           C   C YC   F    R      +  ++   +L +M+++             F  G+P +
Sbjct: 172 CPFGCNYCQTPFFKGFRMRHRPIDQIVKHSRYLRDMRYISPNA---------FAYGSPGA 222

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAGVNR-ISLGVQ 138
           ++  + +  +L  +         +       E  P  V     +   K   NR I +G Q
Sbjct: 223 ILVLEKLEALLRALQPLRKEGRRLFFGTFPSEVRPEFVIPETLELLLKYADNRKIIIGAQ 282

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALS 196
           S + + L+ + R H+      A+  +         D I   P +          L + + 
Sbjct: 283 SGDNRILKLMHRLHDVETIKRAVEYSIEYGFTPIVDFIVGTPYEDEESDRNTIELMKWII 342

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                +  +      GT +          L  E V        QS      +   E+SN 
Sbjct: 343 SKGGKVRAHYFMPLPGTPWA---LCKPKPLSKEMVRFLGTMARQSKLEGEWVKQIELSN- 398

Query: 257 SFLGAESLHNL---NYWRYGDYIG 277
                  LH+L   NY     Y G
Sbjct: 399 ------KLHSLIKENYEEATGYYG 416


>gi|168334669|ref|ZP_02692809.1| conserved hypothetical radical SAM protein [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 323

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 73/217 (33%), Gaps = 18/217 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC              +        +  + +        + +F   
Sbjct: 29  CPNRDGNCGIGGCAYCGEKGVAFETPDATVDIKTQLNENISVIGKKYNANKFIA-YFQNY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVN-RIS 134
           + + +   +   +L+ +         V ++I   P  +     +      +K G +  + 
Sbjct: 88  SNTYMSLADFRNMLEQVEH----PDVVGVSISTRPDCINEQYLEVLDEFGKKTGYDICVE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q++   +L  + R H+ +E I A+   +         LI  LP  ++       +  
Sbjct: 144 LGLQTVNYHTLAKINRGHSLAEFIDAVLRIQKYGFETVVHLILNLPWDSIADVIESAKVV 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            +  + H+ L+ L + + T+      +G+  L S   
Sbjct: 204 SALNLTHVKLHALYLVRDTMMGDQFLNGEFELISAEE 240


>gi|323307004|gb|EGA60288.1| Elp3p [Saccharomyces cerevisiae FostersO]
          Length = 557

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 125/378 (33%), Gaps = 65/378 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+     Q  + 
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVEQLKQL 167

Query: 65  LTGPRSISSIFFGGGTPSLIE------PQNIALILDGI-------------AKNWTVSSN 105
                 +  +  GG   + +          I  + + +                 +++  
Sbjct: 168 XHSIDKVEYVLMGG---TFMSLPKEYREDFIVKLHNALSGFNGNDIDEAILYSQQSLTKC 224

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V ITIE  P      +     K G  R+ +GVQSL E   R   R H          +++
Sbjct: 225 VGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFAVSK 284

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K G
Sbjct: 285 DAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWKTG 344

Query: 223 DLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYG 273
                S N  V   +L   I +        Y +          S +   +L  L   R  
Sbjct: 345 RYKSYSANALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARMX 401

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
           D +G         +VG   V   ++      ++++R++ +A    E FLS E    + L+
Sbjct: 402 D-LGTTCRDVRTREVGIQEVHHKVQPDQ---VELIRRDYYANGGWETFLSYEDPKKDILI 457

Query: 333 MGLRLREGISVKDWEMLA 350
             LRLR+      +    
Sbjct: 458 GLLRLRKASKKYTYRKEF 475


>gi|303235152|ref|ZP_07321772.1| radical SAM protein, TIGR01212 family [Finegoldia magna BVS033A4]
 gi|302493744|gb|EFL53530.1| radical SAM protein, TIGR01212 family [Finegoldia magna BVS033A4]
          Length = 311

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC    H        +    S   +++  +Q    +  +     +F   + + +  + 
Sbjct: 43  CIYC----HEEGGSFENKEKHLSIREQLEKDKQTIENKYNAHKFISYFQNYSNTYMPLE- 97

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQ 143
              +         V + V I++   P  + + + +  ++    +     I LG+Q+   +
Sbjct: 98  ---LFRQYVNEAVVENVVAISVSTRPDCIAIEHLEILKQLQQEKHVDIIIELGLQTSNNK 154

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + R H  ++ I A  + +    R+   +I ALP   M       +      VD   
Sbjct: 155 TLKIINRQHTVADFIRACLMIKKYGFRICTHVILALPWDDMDDVRETAKLLSVLKVDECK 214

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ L I K T+  K +++G + L S +  V+             L  
Sbjct: 215 IHSLYIPKHTILAKWYEEGKVQLKSLDEYVNEVCEFLKYLDKDILIQ 261


>gi|85103762|ref|XP_961595.1| hypothetical protein NCU01229 [Neurospora crassa OR74A]
 gi|7635787|emb|CAB88553.1| probable histone acetyltransferase [Neurospora crassa]
 gi|28923142|gb|EAA32359.1| hypothetical protein NCU01229 [Neurospora crassa OR74A]
          Length = 571

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 139/423 (32%), Gaps = 73/423 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 114 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 173

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDGIAKNWTVSSN-------------VEI 108
                 +  I  GG     P     + I+ + + ++   T++ +             V I
Sbjct: 174 GHSVDKVEYIIMGGTFMSLPESYRDEFISQLHNALSGYGTLNVDEAVRSGEQSNIKCVGI 233

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 234 TIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 293

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 294 FKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 353

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +DL     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 354 NYTPNGLIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 409

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 410 GTTCRDVRTREVGVNEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILVGLLRL 468

Query: 338 REGISVKDW-EMLAGRNLDIECE---------------RNLQRQGF--IERVQFSRLRCT 379
           R+      + E L G+   +  E               R  Q QGF  +   +  R+   
Sbjct: 469 RKCSEKYTFREELVGQPTSLVRELHVYGMAVPLHVRDPRKFQHQGFGTLLMEEAERIARD 528

Query: 380 QRG 382
           + G
Sbjct: 529 EHG 531


>gi|289617631|emb|CBI61354.1| unnamed protein product [Sordaria macrospora]
          Length = 571

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 139/423 (32%), Gaps = 73/423 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 114 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 173

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDGIAKNWTVSSN-------------VEI 108
                 +  I  GG     P     + I+ + + ++   T++ +             V I
Sbjct: 174 GHSVDKVEYIIMGGTFMSLPESYRDEFISQLHNALSGYGTLNVDEAVRSGEQSNIKCVGI 233

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 234 TIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 293

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 294 FKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 353

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +DL     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 354 NYTPNGLIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 409

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 410 GTTCRDVRTREVGVNEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILVGLLRL 468

Query: 338 REGISVKDW-EMLAGRNLDIECE---------------RNLQRQGF--IERVQFSRLRCT 379
           R+      + E L G+   +  E               R  Q QGF  +   +  R+   
Sbjct: 469 RKCSEKYTFREELVGQPTSLVRELHVYGMAVPLHVRDPRKFQHQGFGTLLMEEAERIARD 528

Query: 380 QRG 382
           + G
Sbjct: 529 EHG 531


>gi|251791348|ref|YP_003006069.1| hypothetical protein Dd1591_3790 [Dickeya zeae Ech1591]
 gi|247539969|gb|ACT08590.1| conserved hypothetical protein [Dickeya zeae Ech1591]
          Length = 314

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 77/232 (33%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +         ++          S    +F   T +      + +
Sbjct: 50  CTFCNVASFADEQMQQRG-----IAEQLAAQAGKVNRASRYLAYFQAYTSTY---AEVQV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +    Y   G      LG+QS  +++LR 
Sbjct: 102 LASMYRQALAQADMVGLCVGTRPDCVPDTVLDLLADYHDEGYEVWLELGLQSAHDRTLRR 161

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP ++       LQ+ +   VD + L+ L
Sbjct: 162 INRGHDFACYRQTAQRARARGLKVCSHLIVGLPGESGEHCLSTLQQVVEAGVDGVKLHPL 221

Query: 208 TIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I  G++  K  + G L  L   +       + +        H   IS  + 
Sbjct: 222 HIVTGSVMAKAWQAGRLAALQLADYVSIAGEMIRHTPPEIIYHR--ISASAR 271


>gi|225027657|ref|ZP_03716849.1| hypothetical protein EUBHAL_01916 [Eubacterium hallii DSM 3353]
 gi|224954971|gb|EEG36180.1| hypothetical protein EUBHAL_01916 [Eubacterium hallii DSM 3353]
          Length = 315

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 84/227 (37%), Gaps = 14/227 (6%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +     C +C         K      ++   +  + + +         ++F   T +
Sbjct: 32  CPNRKEGGGCLFCADAGTGFEAKESTMPVLEQLQSSREKVEKRYHAHKFI-VYFQNYTNT 90

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGV 137
            +    +  +L  + +   + + VEI++   P  +  +  + ++           I LG+
Sbjct: 91  FLP---LPALLQYMEEAAGMENIVEISLSTRPDCIRQDYLEAFQNFRERTGIEVSIELGL 147

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q++   +L  + R H  +E I A+ L       +   +I  LP  TM       +   + 
Sbjct: 148 QTVNYHTLSAMNRGHGLAEFINAVLLIAPYHFPVCVHMILNLPGDTMEDARESARVLSAL 207

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            V  + L+ L I K    YK ++ G++ + S+   ++      S+  
Sbjct: 208 PVSMVKLHSLYIPKECALYKEYEAGNIQICSKQEYIERLAEFISLLR 254


>gi|169825222|ref|YP_001692833.1| putative Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
 gi|167832027|dbj|BAG08943.1| putative Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
          Length = 311

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 82/227 (36%), Gaps = 16/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC    H        +    S   +++  +Q    +  +     +F   + + +  + 
Sbjct: 43  CIYC----HEEGGSFENKEKHLSIREQLEKDKQTIENKYNAHKFISYFQNYSNTYMPLE- 97

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQ 143
              +         V   V I++   P  + + + +  ++    +     I LG+Q+   +
Sbjct: 98  ---LFRKYVNEAVVEDVVAISVSTRPDCIVIEHLEILKQLQQEKHVDIIIELGLQTSNNK 154

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + R H  ++ I A  + +    R+   +I ALP   M       +      VD   
Sbjct: 155 TLKIINRQHTVADFIRACLMIKKYGFRICTHVILALPWDDMDDVRETAKLLSVLKVDECK 214

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ L I K T+  K +K+G + L S +  V+             L  
Sbjct: 215 IHSLYIPKYTILAKWYKEGKVQLKSLDEYVNEVCEFLKYLDKDILIQ 261


>gi|162421099|ref|YP_001605673.1| radical SAM family protein [Yersinia pestis Angola]
 gi|162353914|gb|ABX87862.1| radical SAM protein, TIGR01212 family [Yersinia pestis Angola]
          Length = 327

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 12/228 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F           +    +    +Q  +     R ++  +F   T +      +  +  
Sbjct: 67  CTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLA--YFQAYTSTY---AEVNALAA 121

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRFLGR 150
              +    +  V + +   P  V           ++ G      LG+Q+  +++L+ + R
Sbjct: 122 MYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINR 181

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +        AR    ++   LI  LP +   Q    L++ ++  VD + L+ L I 
Sbjct: 182 GHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIV 241

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +G+   K  + G L    E+  +    + +   +    H   IS  + 
Sbjct: 242 EGSTMAKAWRAGRLTA-LEDYVLTAGEMIRHTPAEVVYHR--ISASAR 286


>gi|145253765|ref|XP_001398395.1| elongator complex protein 3 [Aspergillus niger CBS 513.88]
 gi|134083967|emb|CAK43062.1| unnamed protein product [Aspergillus niger]
          Length = 575

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 121/385 (31%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 118 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 177

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTVSS----------NVEI 108
                       GGT   +           +   L G   +    +           V I
Sbjct: 178 GHSVDKVEYIIMGGTFMSLPEDYRESFVAQLHNALSGYQTDNVDEAVQAGEMSNVKCVGI 237

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 238 TIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 297

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 298 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 357

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 358 NYTPNALI---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 412

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 413 -FGTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYTANGGWETFLAYEDPKQDILIGLL 470

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+      +     G+   I  E
Sbjct: 471 RLRKCSPTHTFRPEFTGQQTSIVRE 495


>gi|313759752|gb|ADR79188.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
          Length = 144

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 2/129 (1%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R   F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFTQT 60

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   L    D L+L+        +        +  +PS      +Y+  +   +  G  A
Sbjct: 61  IADILHMRPDRLALFSFASVP-WIKPHQKVMKESDMPSMEEKFAIYSYARHTLTKAGYQA 119

Query: 251 YEISNHSFL 259
             + + S  
Sbjct: 120 IGLDHFSLP 128


>gi|258645790|ref|ZP_05733259.1| radical SAM protein [Dialister invisus DSM 15470]
 gi|260403161|gb|EEW96708.1| radical SAM protein [Dialister invisus DSM 15470]
          Length = 316

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 75/226 (33%), Gaps = 13/226 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C +C   S    Y+         +     +  +      +   + F      + +    +
Sbjct: 42  CIFCG--SIRADYETKAVGMEITRQIDRSISHVGPKYKAKKFIAYFLNFTN-TYMP---L 95

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK----AGVNR-ISLGVQSLEEQS 144
           +     + +       V + +   P  +  +  +  R+     G N  + LG+QS+   +
Sbjct: 96  SRFEYCVKEACGHPDIVGLAVSTRPDCIHESYLEVLREAQGKYGTNITVELGLQSVNPHT 155

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  +GR H  +E I A          +   +I  LP       E   +      V  + +
Sbjct: 156 LLKIGRCHTVAEFIDAALQIGRYHFDLCAHIIADLPWDDRIDVEEVAKLVSVLPVTEIKI 215

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + L I KGT   KM++ GD+ L       +   L  S+     +  
Sbjct: 216 HSLYIIKGTKLAKMYEKGDIKLLPPEEYAERVVLILSMLRPDIVVQ 261


>gi|156935734|ref|YP_001439650.1| hypothetical protein ESA_03604 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533988|gb|ABU78814.1| hypothetical protein ESA_03604 [Cronobacter sakazakii ATCC BAA-894]
          Length = 311

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S     +        S   ++               +F   T +      + +
Sbjct: 45  CTFCNVASFADETQQHL-----SIQQQLTQQAARVDRARRYLAYFQAYTSTF---AEVNV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +  V + +   P  V     +   GY + G      LG+QS ++++L  
Sbjct: 97  LRAMYQQAISQADIVGLCVGTRPDCVPESVLDLLAGYHEQGYEVWLELGLQSAKDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +T +     L+R +   VD + L+ L
Sbjct: 157 INRGHDFACYQGTTRRARARGLQVCTHLIVGLPGETRSDALTSLERVVETGVDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G++  K  + G L   + +            T    ++   IS  + 
Sbjct: 217 HIVEGSIMAKAWRAGRLSGIALDDYTVTAGEMIRHTPPDIIYH-RISASAR 266


>gi|190344747|gb|EDK36490.2| hypothetical protein PGUG_00588 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 389

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 83/260 (31%), Gaps = 47/260 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +RQ
Sbjct: 110 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLRQ 168

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VE 107
           L            GGT   +        I  + + +        +             V 
Sbjct: 169 LGHSIDKVEYIIMGGTFMSLPVDYREGFITQLHNALTGYNGRDIDEAIKFSQQSQTKCVG 228

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 229 ITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDA 288

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++      
Sbjct: 289 GYKVVSHMMPDLPNVGMERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYEL---WKK 345

Query: 225 VLPSENVAVDLYNLTQSITS 244
            L     A  L +L   I +
Sbjct: 346 GLYKSYNANALIDLVARILA 365


>gi|317471383|ref|ZP_07930737.1| HemN protein [Anaerostipes sp. 3_2_56FAA]
 gi|316901134|gb|EFV23094.1| HemN protein [Anaerostipes sp. 3_2_56FAA]
          Length = 132

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 11/129 (8%)

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADE 329
           +       G  A S  +         +EK+          +   + EKE  L+ +++ +E
Sbjct: 11  QGNHTWVFGLAASSYFRGKRFTNPADMEKYLS------ITDFSGIFEKETELTKKEEMEE 64

Query: 330 FLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQRGMTML 386
           ++ +GLR+ +GIS  ++    G  +       +Q    +G +E+    R+   Q+ + + 
Sbjct: 65  YMFLGLRMTKGISKTEFSKRFGTGILDVYREPIQELSGKGLLEQ-DAERIWIPQQALFLS 123

Query: 387 DSVIANLAV 395
           + V+    +
Sbjct: 124 NQVMMEFLL 132


>gi|207340547|gb|EDZ68864.1| YPL086Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 469

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 69/368 (18%), Positives = 128/368 (34%), Gaps = 67/368 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 166

Query: 65  LTGP-RSISSIFFGGGTPSLIE------PQNIALILDGI-------------AKNWTVSS 104
           L      +  +  GG   + +          I  + + +                 +++ 
Sbjct: 167 LGHSIDKVEYVLMGG---TFMSLPKEYREDFIVKLHNALSGFNGNDIDEAILYSQQSLTK 223

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     K G  R+ +GVQSL E   R   R H          ++
Sbjct: 224 CVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFAVS 283

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ K 
Sbjct: 284 KDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWKT 343

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRY 272
           G     S N  V   +L   I +        Y +          S +   +L  L   R 
Sbjct: 344 GRYKSYSANALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVDNGNLRELALARM 400

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
            D +G         +VG   V   ++      ++++R++ +A    E FLS E    + L
Sbjct: 401 KD-LGTTCRDVRTREVGIQEVHHKVQPDQ---VELIRRDYYANGGWETFLSYEDPKKDIL 456

Query: 332 MMGLRLRE 339
           +  LRLR+
Sbjct: 457 IGLLRLRK 464


>gi|312377999|gb|EFR24688.1| hypothetical protein AND_10547 [Anopheles darlingi]
          Length = 549

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 115/365 (31%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEM------QWMRQL 65
           C         C YC      DF     S+              +   +      + ++QL
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYHPFLQTRHRVEQLKQL 160

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +        I  + D ++ +              + +  + I
Sbjct: 161 GHSVDKVEFIVMGGTFMCLPEDYRDFFIRNLHDALSGHTSSSVAEAVKYSERSHTKCIGI 220

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H       +  ++++  
Sbjct: 221 TIETRPDYCLKRHLSDLLAYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSKDAG 280

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +      E      +  D L +Y   + +GT  Y++ K G   
Sbjct: 281 FKVVSHMMPDLPNVDIERDIEQFIEFFENPDFRADGLKIYPTLVIRGTGLYELWKTGRYK 340

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +  V   +L   I +        Y +          S +   +L  L   R  D  
Sbjct: 341 SYPPSTLV---DLVAKILALVPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALARMKDL- 396

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               G   R           I      + ++++R++  A    E FLS E    + L+  
Sbjct: 397 ----GTDCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPKQDILVGL 452

Query: 335 LRLRE 339
           LRLR+
Sbjct: 453 LRLRK 457


>gi|333029880|ref|ZP_08457941.1| Conserved hypothetical protein CHP01212 [Bacteroides coprosuis DSM
           18011]
 gi|332740477|gb|EGJ70959.1| Conserved hypothetical protein CHP01212 [Bacteroides coprosuis DSM
           18011]
          Length = 308

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 73/215 (33%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC+ N          E  +++ L E +       P      +F   
Sbjct: 33  CPNRDGTKGHGGCTYCN-NQTFNPAYCKTEKSVETQLNEGKVFFSYKYPEMKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLG 136
           T +      +  +     +       V + I   P  +     +  +   K     +  G
Sbjct: 92  TNTY---DELDGLKKKYEEALQTKDVVGLVIGTRPDCMPDSLLDYLEELNKKTFLLVEYG 148

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           ++S  +++L+ + R H  +E + AI+  +         +I  LP +   Q   +      
Sbjct: 149 IESTHDETLKRINRGHTFAETVDAIYRTKQRGILTGGHVILGLPGEDKNQILSQAIEISK 208

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             +D + L+QL I KGT   K + +        NV
Sbjct: 209 LPLDTIKLHQLQIIKGTKMAKEYAEHPEDFHMFNV 243


>gi|70998592|ref|XP_754018.1| histone acetyltransferase [Aspergillus fumigatus Af293]
 gi|66851654|gb|EAL91980.1| histone acetyltransferase, putative [Aspergillus fumigatus Af293]
 gi|159126248|gb|EDP51364.1| histone acetyltransferase, putative [Aspergillus fumigatus A1163]
          Length = 574

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 127/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 119 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 178

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   + P      IA + + ++   T + +             V I
Sbjct: 179 GHSVDKVEYIVMGGTFMSLPPDYRESFIAQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 238

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 239 TIETRPDYCLDTHLSDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 298

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 299 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 358

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  V   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 359 NYTPNALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 413

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 414 -FGTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYTANGGWETFLAYEDPKQDILIGLL 471

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+  +   +     G+   I  E
Sbjct: 472 RLRKCSATHTFRPEFTGQQTSIVRE 496


>gi|297569110|ref|YP_003690454.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925025|gb|ADH85835.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 475

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 81/238 (34%), Gaps = 17/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R +K    +++      MQ +RQ  G   +  + F     +     
Sbjct: 210 CPYSCSYCDRSVFRRSFKYNSADYV---YRHMQHLRQRWG---VRHLNFYDDQFTF---- 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +++   +      N+          V+       +KAG   ISLG+++ +   L  
Sbjct: 260 HRGRVVELCRRLIEEPLNMTFNCAVRAEHVDPELLALMKKAGCWMISLGIETGDPDLLAQ 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +N + +     IH       R+   L+  LP +T       ++   S  +D  +L + 
Sbjct: 320 HRQNADLNLLAKVIHDIHRAGIRVKGLLMLGLPGETEESVRRSMRYVFSLPIDDFNLAKF 379

Query: 208 TIEKGTLFYKMHK------DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           T   G+  Y+         +    +   N       +T+       L  Y  S+    
Sbjct: 380 TPFPGSPIYEKIHELGEFEEDYRKMDCMNFVFVTKGMTRQRLEELFLEFYR-SHFMRP 436


>gi|146422549|ref|XP_001487211.1| hypothetical protein PGUG_00588 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 389

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 83/260 (31%), Gaps = 47/260 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +RQ
Sbjct: 110 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLRQ 168

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VE 107
           L            GGT   +        I  + + +        +             V 
Sbjct: 169 LGHSIDKVEYIIMGGTFMSLPVDYREGFITQLHNALTGYNGRDIDEAIKFSQQSQTKCVG 228

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H          +A++ 
Sbjct: 229 ITIETRPDYCTETHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFAVAKDA 288

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++      
Sbjct: 289 GYKVVSHMMPDLPNVGMERDLEQFKEYFENPDFRTDGLKLYPTLVIRGTGLYEL---WKK 345

Query: 225 VLPSENVAVDLYNLTQSITS 244
            L     A  L +L   I +
Sbjct: 346 GLYKSYNANALIDLVARILA 365


>gi|114571572|ref|YP_758252.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Maricaulis
           maris MCS10]
 gi|122314895|sp|Q0AK79|MIAB_MARMM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|114342034|gb|ABI67314.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maricaulis maris MCS10]
          Length = 456

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 69/206 (33%), Gaps = 14/206 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E++ +    G R ++ +      F G  PS
Sbjct: 163 CDKFCTFC---VVPYTRGAEWSRPVDQIVAEIRALAA-KGIREVTLLGQNVNAFHGAPPS 218

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             E +    +   +     +     I     +P  ++    Q +      +    L VQ+
Sbjct: 219 GREAEGAWGLGQLVRHVALIGGIERIRFTTSHPRDMDEVLIQAFADTPKLMPYFHLPVQA 278

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A E +A I   R   P ++   D+I   P +T   +E  L      
Sbjct: 279 GSDKILKSMNRQHTAEEYVAIIDRLRAARPDIAISGDMIVGFPGETDADFEATLDLVRRV 338

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  ++ +   GT    M    D
Sbjct: 339 KFASCFSFKYSKRPGTPGAAMFNQVD 364


>gi|18978095|ref|NP_579452.1| hypothetical protein PF1723 [Pyrococcus furiosus DSM 3638]
 gi|18893890|gb|AAL81847.1| hypothetical protein PF1723 [Pyrococcus furiosus DSM 3638]
          Length = 425

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 74/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-LIEP 86
           C   C YC        Y  G     +     +++ +++   R I+   F  G+P  +++ 
Sbjct: 175 CPFGCYYC-----QTPYAKGFRMRHRPIDQIVKYSKRMKDMRYITPNAFAYGSPGGILKI 229

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEE 142
           + +  +L  +         +       E  P  V     +   K     R+++G QS ++
Sbjct: 230 EKVEALLRALQPLRREGRRLFYGTFPSEVRPEFVTRETVELLVKYTDTKRLAIGAQSGDD 289

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ---RALSYAV 199
           + L+ + R H     I A+ L+         D I  LP +T       ++     +    
Sbjct: 290 KMLKAMHRVHRVEHVINAVELSLEYGITPVVDFIVGLPGETEEMQRKSIELMKWIIKKG- 348

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +  +      GT + K        L  E          +           E S
Sbjct: 349 GKVRAHYFMPLPGTPWAK---CKPSPLSEEMKKFLGRMAAEGKIEGAWGIQIETS 400


>gi|313759744|gb|ADR79184.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
 gi|313759746|gb|ADR79185.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
 gi|313759748|gb|ADR79186.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
          Length = 144

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 2/129 (1%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R   F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFTQT 60

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   L    D L+L+        +        +  +PS      +Y+  +   +  G  A
Sbjct: 61  IADILHMRPDRLALFSFASVP-WIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQA 119

Query: 251 YEISNHSFL 259
             + + S  
Sbjct: 120 IGLDHFSLP 128


>gi|302691946|ref|XP_003035652.1| hypothetical protein SCHCODRAFT_13958 [Schizophyllum commune H4-8]
 gi|300109348|gb|EFJ00750.1| hypothetical protein SCHCODRAFT_13958 [Schizophyllum commune H4-8]
          Length = 554

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 130/367 (35%), Gaps = 64/367 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF+   + Y   +   +++              ++ ++ L
Sbjct: 100 CPHIAMTGNICVYCPGGPDSDFDYSTQSYTGYEPTSMRAIRARYDPYEQTRGRVEQLKAL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQ-------NIALILDGI----------AKNWTVSSNVEI 108
                       GGT   +           +   L G               + S  + I
Sbjct: 160 GHSVDKVEFIIMGGTFMSMPEDYRSKFVAQLHNALSGFTGTDVDEAVRYSEQSKSKAIGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + HLA++  
Sbjct: 220 TIETRPDYCLRPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHLAKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 280 FKVVAHMMPDLPNVGVERDLEQFKEYFENPAFRSDGLKIYPTLVIRGTGLYELWRTGRYK 339

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAESLHNLNYW---RYGDYIG 277
             + NV VD+     ++        Y +     L     G ++  NL      R  D+  
Sbjct: 340 NYTPNVLVDVVARILALVPPWT-RVYRVQRDIPLPLVTSGCDNSGNLRELALNRMKDF-- 396

Query: 278 IGPGAHSR----VKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
              GA  R     +VG H +   +   PES ++++R++  A    E FLS E    + L+
Sbjct: 397 ---GAECRDVRFREVGIHEIHHKVR--PES-VELIRRDYTANGGWETFLSYEDPEKDILV 450

Query: 333 MGLRLRE 339
             LRLR+
Sbjct: 451 GLLRLRK 457


>gi|268678902|ref|YP_003303333.1| radical SAM protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268616933|gb|ACZ11298.1| Radical SAM domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 564

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 20/225 (8%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C  +       C +C  +          +N  +     + + ++     S + ++    T
Sbjct: 30  CPNRERDGNGGCTFCPEHGARAAQIADAKNVEEQIEKAIVFAKKRYNATSFA-LYIQAYT 88

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGV 137
            +      I    +   +   +     + I   P  +     +   +        + LGV
Sbjct: 89  GTFAS---ILKQKEAYERLLNLYPFKALHIGTRPDCLSEATLEYLAELNSRLDVVVELGV 145

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QSL++ SL  + R H+A  ++ AI        ++   LI  LP ++   WE  ++  +  
Sbjct: 146 QSLQDVSLERINRGHSAHASLEAIERLHVKGLKVYAHLILGLPDESFCMWEESVKGLVEA 205

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +D +  + L I  GT   + ++     L      ++ Y   +++
Sbjct: 206 GIDGIKFHNLHIISGTQLAREYEVAPFQL------LNEYEYAEAL 244


>gi|78356044|ref|YP_387493.1| hypothetical protein Dde_0997 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218449|gb|ABB37798.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 368

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 76/241 (31%), Gaps = 41/241 (17%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+          G      +   +    + + GPR  S ++    
Sbjct: 39  CPNRDGTLSHSGCVFCN----PGGSGSGLARKGLTLPEQWAHWQGIYGPRHKSGLYIAYL 94

Query: 80  ---TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ-----------GY 125
              + +    + +  +L    +    +  V   I   P  ++                  
Sbjct: 95  QSFSNTYGPVEKLEGVLS---QIEGFTGVVGAGIGTRPDCLDEQRLDRIARSIGRIDAAL 151

Query: 126 RKAGVNR------------ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
             +G+              + LG+QS  + +LR + R H+ +  + A+H+A     ++  
Sbjct: 152 AASGIQPQGICGKAGAEVWLELGLQSSSDATLRRINRGHDFACFVKAVHMAHERGLKVCA 211

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            LI  LP +T   +   +    +  V  +  + L + + T    M + G+          
Sbjct: 212 HLIAGLPGETGADFARTVADVAALPVAGVKFHGLYVAEHTAVAAMWRSGEYRPMEMEEYA 271

Query: 234 D 234
            
Sbjct: 272 Q 272


>gi|94265914|ref|ZP_01289641.1| Cobalamin B12-binding:Radical SAM [delta proteobacterium MLMS-1]
 gi|93453538|gb|EAT03943.1| Cobalamin B12-binding:Radical SAM [delta proteobacterium MLMS-1]
          Length = 475

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 17/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R +K     ++      MQ++RQ  G   I  + F     +     
Sbjct: 210 CPYACSYCDRSVFRRSFKYNSAAYV---YRHMQYLRQRWG---IRHLNFYDDQFTF---- 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +++   +      ++          V+       ++AG   ISLG+++ +   L  
Sbjct: 260 HRGRVVELCRRLIEEPLDMTFNCAIRAEHVDPELLALMKRAGCWMISLGIETGDPDLLAQ 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +N +       IH       R+   L+  LP ++       ++   S  +D  +L + 
Sbjct: 320 HRQNADLDLLARVIHDIHRAGIRVKGLLMLGLPGESEESVRRSMRYVFSLPIDDFNLAKF 379

Query: 208 TIEKGTLFYKMHK------DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           T   G+  Y+         +    +   N       +T+       L  Y  S+    
Sbjct: 380 TPFPGSPIYEKIHELGDFEEDYRKMDCMNFVFVTKGMTRQQLEELFLEFYR-SHFMRP 436


>gi|254456876|ref|ZP_05070304.1| radical SAM protein, TIGR01212 family [Campylobacterales bacterium
           GD 1]
 gi|207085668|gb|EDZ62952.1| radical SAM protein, TIGR01212 family [Campylobacterales bacterium
           GD 1]
          Length = 319

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 69/209 (33%), Gaps = 26/209 (12%)

Query: 32  CPYC----------------DFN----SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C +C                 F+    S        Q + ++     +   +        
Sbjct: 43  CTFCENDSFSASTGETQELKGFHLNLESKSNPNLQKQLDQLEMQFNAISKRQSEEYGAKK 102

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             ++F   T +      +  + +       V   V ++I     S+     +       +
Sbjct: 103 FLVYFQSFTNTYAPFDTLKALYEKALSFPNV---VGLSIGTRSDSITDETLEYLALLNKD 159

Query: 132 R---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           +   I  G+QS+ +++L+ + R H++      I  ++     +   LI+ LP +T     
Sbjct: 160 KEIWIEFGIQSVYDETLQKINRGHSSDNVKEWIVKSKEKGLNVCGHLIFGLPDETEEMML 219

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYK 217
              ++A  + +D +  + L + K T    
Sbjct: 220 ETSKQAYEWGIDSVKYHPLYVVKKTALAN 248


>gi|121535189|ref|ZP_01667004.1| conserved hypothetical radical SAM protein [Thermosinus
           carboxydivorans Nor1]
 gi|121306180|gb|EAX47107.1| conserved hypothetical radical SAM protein [Thermosinus
           carboxydivorans Nor1]
          Length = 317

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 79/222 (35%), Gaps = 20/222 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISS---IFFGGGTPSLIEP 86
           C +C           G EN   S     ++   +    P+  ++    +F   + + +  
Sbjct: 41  CVFCG------EIGAGYENLPASMTVREQIAANKAHIAPKYKANKFIAYFQNFSNTYLPV 94

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLE 141
           ++ A  L+   +       V I I   P  +     +   K    R     + LG+Q++ 
Sbjct: 95  KDFAAYLEEACQ----PDIVGIAIATRPDCINDAYLEAMAKVQAARGVDIAVELGLQTVN 150

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             SL  + R H  +E I A+   +     +   LI  LP   M       +   +  V  
Sbjct: 151 YHSLAKINRGHTLAEFIDAVLRLKQYRFDVCAHLILNLPWDEMADVVENAKVLSALGVQQ 210

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + L+ L I KGT   K ++ G+L L S+   ++         
Sbjct: 211 VKLHALYIVKGTPMAKWYEQGELTLVSKEEYIERVITFLEYL 252


>gi|89896776|ref|YP_520263.1| hypothetical protein DSY4030 [Desulfitobacterium hafniense Y51]
 gi|89336224|dbj|BAE85819.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 334

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC        +    E  I     E++ +       +    +F   T +      +  
Sbjct: 64  CIYCS-ARGSGDFAGQAEKSIHEQFCEIKEVMNRKWSSARYLAYFQAYTNTYAP---LKR 119

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +   +       V ++I   P  +         +        + LG+QS+ ++++ ++
Sbjct: 120 LQEVYEQALAEEGVVGLSIATRPDCLPAEVLDYLEELNQRTYLWVELGLQSIHDRTMEWV 179

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           GR H   + +  +   R    R+   +IY LP +T+       Q      V  + L+ L 
Sbjct: 180 GRGHTFEDFLQGLDKLRRRNIRVCTHMIYGLPGETLEDMFGSAQTLAKLDVQGVKLHLLH 239

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT    +++     L S++  + L   T  I  A  +  
Sbjct: 240 VLKGTPLADIYEQSPFPLLSQDEYIHLICDTLEILPAQTVIH 281


>gi|124806266|ref|XP_001350675.1| histone acetyltransferase, putative [Plasmodium falciparum 3D7]
 gi|23496801|gb|AAN36355.1| histone acetyltransferase, putative [Plasmodium falciparum 3D7]
          Length = 1092

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-----------IEANPSSVEVNNFQGYRKAGVNRIS 134
             NI  +L    K  T+    EI            +E  P  +  +     R  G  R+ 
Sbjct: 424 AANIYPVLKDRRKKLTLKEEQEINEKSNCRIIGLTLETRPDQINKDELLRLRYYGCTRVQ 483

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q +++  L+ + R     + I AI+L +    ++   L+  LP   + +     +  
Sbjct: 484 LGIQHIDDVILKKVNRQCTLKDCIRAIYLLKENGFKVDIHLMPDLPYSDVYKDIHMFKYV 543

Query: 195 L---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           L       D   +Y   I   T   K + + +     E   
Sbjct: 544 LSSTDLQADQWKIYPCEITPFTKIEKWYNNNEYKPYFETNK 584


>gi|222099130|ref|YP_002533698.1| hypothetical protein CTN_0156 [Thermotoga neapolitana DSM 4359]
 gi|221571520|gb|ACM22332.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 304

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 11/233 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    +    +  I+  +  M+   +  G R   + +F   + +      +  
Sbjct: 42  CIYCD--ATGSGFTTLMKLPIREQVLRMKERYEKRGIRKFIA-YFQAFSNTYASIDELRK 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQSLRF 147
                 +     S V++++   P  V            RK  V+ + LG+Q+   ++LR 
Sbjct: 99  ---KYEEALVDDSIVQLSVSTRPDLVPEEVLDLLEEFKRKVDVS-VELGLQTANYRTLRK 154

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H  +E + A    +     +   +I  LP   M       +   +  VD + L+ L
Sbjct: 155 INRGHTLAEFVDAAVRVKRRGMELVVHVILNLPWDDMEDVVETAKLLSALDVDGVKLHSL 214

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            + +GT   +M++ G++ + S    ++         S   +    +++    G
Sbjct: 215 YVVEGTKLAEMYRKGEIEICSLEEYIERVITFLEYLSPKVVVHRLVADPPKEG 267


>gi|119498527|ref|XP_001266021.1| histone acetyltransferase, putative [Neosartorya fischeri NRRL 181]
 gi|119414185|gb|EAW24124.1| histone acetyltransferase, putative [Neosartorya fischeri NRRL 181]
          Length = 576

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 127/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 119 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 178

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   + P      IA + + ++   T + +             V I
Sbjct: 179 GHSVDKVEYIVMGGTFMSLPPDYRESFIAQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 238

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 239 TIETRPDYCLDTHLSDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 298

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 299 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 358

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  V   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 359 NYTPNALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 413

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 414 -FGTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYTANGGWETFLAYEDPKQDILIGLL 471

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+  +   +     G+   I  E
Sbjct: 472 RLRKCSTTHTFRPEFTGQQTSIVRE 496


>gi|195117986|ref|XP_002003521.1| GI22150 [Drosophila mojavensis]
 gi|193914096|gb|EDW12963.1| GI22150 [Drosophila mojavensis]
          Length = 563

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMALSEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H  +       + ++ 
Sbjct: 220 ITIETRPDYCLKRHITDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVAAVCETFKMGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTVCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|332886150|gb|EGK06394.1| TIGR01212 family radical SAM protein [Dysgonomonas mossii DSM
           22836]
          Length = 307

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  S    Y   Q +        + +      P      +F   T +    + +  
Sbjct: 44  CTYCNNQSFSPGYGGKQRSVSDQLRDGIAFFS-YKYPEMKYLAYFQSYTNTYDSIEKLIE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           + +       V   V + I   P  +       + +        I  G++S  + +L+F+
Sbjct: 103 LYEEALSYPNV---VGLIIGTRPDCMPDELLDYFAELNKRTFLIIEYGLESTLDSTLQFI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E+  AI             LI  LP ++  Q            +  + L+QL 
Sbjct: 160 NRGHTHQESEEAILKTAAKGIYTGAHLILGLPHESREQVLAHADVVAKLPLTTIKLHQLQ 219

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + KGT+  + +++         V
Sbjct: 220 LIKGTVMARQYREHPEWFNLFEV 242


>gi|254285969|ref|ZP_04960930.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423879|gb|EDN15819.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 316

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R HN +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHNFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  + G L +  ++  V +       T    ++   +S+
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRFTPPEIVYH-RVSS 267

Query: 256 HSF 258
            + 
Sbjct: 268 AAR 270


>gi|169765191|ref|XP_001817067.1| elongator complex protein 3 [Aspergillus oryzae RIB40]
 gi|238503512|ref|XP_002382989.1| histone acetyltransferase, putative [Aspergillus flavus NRRL3357]
 gi|83764921|dbj|BAE55065.1| unnamed protein product [Aspergillus oryzae]
 gi|220690460|gb|EED46809.1| histone acetyltransferase, putative [Aspergillus flavus NRRL3357]
          Length = 575

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 125/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 118 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 177

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        IA + + ++   T + +             V I
Sbjct: 178 GHSVDKVEYIIMGGTFMSLPEDYRESFIAQLHNALSGYQTDNVDEAVQAGEMSNVKCVGI 237

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 238 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 297

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 298 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 357

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  V   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 358 NYTPNALV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 412

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 413 -FGTTCRDVRTREVGINEVKNKIRPSQ-VELIRRDYTANGGWETFLAYEDPKQDILIGLL 470

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+      +     G+   I  E
Sbjct: 471 RLRKCSPTHTFRPEFTGQQTSIVRE 495


>gi|169624140|ref|XP_001805476.1| hypothetical protein SNOG_15322 [Phaeosphaeria nodorum SN15]
 gi|111056135|gb|EAT77255.1| hypothetical protein SNOG_15322 [Phaeosphaeria nodorum SN15]
          Length = 572

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 130/380 (34%), Gaps = 62/380 (16%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------ 69
           C         C YC      DF    + Y   +   +++         Q  G        
Sbjct: 115 CPHISYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQIKSL 174

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDGIAKNWTVSSN-------------VEI 108
                 +  I  GG     P     + I+ + + ++   T   +             V I
Sbjct: 175 GHSVDKVEYIIMGGTFMSLPESYRDEFISQLHNALSGYQTKDVDEAVAAGEMSNIKCVGI 234

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 235 TIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAKTFCLSKDAG 294

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   +         +  D L +Y   + +GT  Y++ + G   
Sbjct: 295 FKVVSHMMPDLPNVGMERDLDQFVEYFANPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 354

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 355 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 410

Query: 279 GPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           G    S   V +  V I+  KH   P+  +++VR++  A    E FL+ E    + L+  
Sbjct: 411 G---TSCRDVRTREVGINEVKHKIRPDQ-VELVRRDYTANGGWETFLAYEDPKQDILIAL 466

Query: 335 LRLREGISVKDWE-MLAGRN 353
           LRLR+      +   L G+ 
Sbjct: 467 LRLRQCSKEHTFRPELTGQP 486


>gi|157113367|ref|XP_001657798.1| elongator component, putative [Aedes aegypti]
 gi|108877788|gb|EAT42013.1| elongator component, putative [Aedes aegypti]
          Length = 549

 Score = 78.8 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 112/365 (30%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEM------QWMRQL 65
           C         C YC      DF     S+              +   +      + ++QL
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKQL 160

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVEI 108
                       GGT   +        I  + D                   + +  + I
Sbjct: 161 GHSVDKVEFIVMGGTFMCLPEDYRDYFIRNLHDALSGHTSSSVEEAVRYSEKSHTKCIGI 220

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H       +  ++++  
Sbjct: 221 TIETRPDYCLKRHLSDLLAYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSKDAG 280

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +      E      +  D L +Y   + +GT  Y++ K G   
Sbjct: 281 FKVVSHMMPDLPNVDIERDIEQFIEFFENPDFRADGLKIYPTLVIRGTGLYELWKTGRYK 340

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +  V   +L   I +        Y +          S +   +L  L   R  D  
Sbjct: 341 SYPPSTLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL- 396

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               G   R           I      + ++++R++  A    E FLS E    + L+  
Sbjct: 397 ----GTDCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPKQDILVGL 452

Query: 335 LRLRE 339
           LRLR+
Sbjct: 453 LRLRK 457


>gi|302379508|ref|ZP_07267994.1| radical SAM protein, TIGR01212 family [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312685|gb|EFK94680.1| radical SAM protein, TIGR01212 family [Finegoldia magna
           ACS-171-V-Col3]
          Length = 311

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC    H        +    S   +++  +Q    +  +     +F   + + +  + 
Sbjct: 43  CIYC----HEEGGSFENKEKHLSIREQLEKDKQTIENKYNAHKFISYFQNYSNTYMPLE- 97

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQ 143
              +         V + V I++   P  + + + +  ++    +     I LG+Q+   +
Sbjct: 98  ---LFRKYVNEAVVENVVAISVSTRPDCIAIEHLEILKQLQQEKHVDIIIELGLQTSNNK 154

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + R H  ++ I A  + +    R+   +I ALP   M       +      VD   
Sbjct: 155 TLKIINRQHTVADFIRACLIIKKYGFRICTHVILALPWDDMDDVRETAKLLSVLKVDECK 214

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ L I K T+  K +++G + L S +  V+             L  
Sbjct: 215 IHSLYIPKHTILAKWYEEGKVQLKSLDEYVNEVCEFLKYLDKDILIQ 261


>gi|328950938|ref|YP_004368273.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451262|gb|AEB12163.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Marinithermus hydrothermalis DSM 14884]
          Length = 445

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 80/252 (31%), Gaps = 30/252 (11%)

Query: 11  MTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQ---- 64
           +      +L  +V     C   C YC     V + +  +        L E++ ++     
Sbjct: 135 VPPPPKGTLSAFVSIIRGCNHHCTYC----IVPKTRGPEVSRHPDLILEEIERLKAAGVL 190

Query: 65  ---LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L G    S      G PS    + + ++          ++       ++P +   + 
Sbjct: 191 EVTLLGQNVNSYGKDQPGYPSF--AELLRMVGQIGIPRIKFTT-------SHPVNFTDDI 241

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            Q   +       I L VQS   + LR +GR +     +  +   +   P +  S D+I 
Sbjct: 242 IQAIAETPQVCRYIHLPVQSGSNRVLRRMGREYRREWYLDRVRAIKEALPDVVLSTDIIV 301

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T   +E  L        DH  ++  +   GT   +  +     LP E     L  
Sbjct: 302 GFPGETEADFEETLTLYDEVGYDHAYMFIYSPRPGTPSARHFQ----DLPREVKVARLQR 357

Query: 238 LTQSITSAHGLH 249
           L +         
Sbjct: 358 LIEKQKEWSYRK 369


>gi|189190612|ref|XP_001931645.1| elongator complex protein 3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973251|gb|EDU40750.1| elongator complex protein 3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 572

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 74/365 (20%), Positives = 128/365 (35%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR------ 69
           C         C YC      DF    + Y   +   +++         Q  G        
Sbjct: 115 CPHISYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQIKSL 174

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDGIAKNWTVSSN-------------VEI 108
                 +  I  GG     P     + I+ + + ++   T + +             V I
Sbjct: 175 GHSVDKVEYIIMGGTFMSLPESYRDEFISQLHNALSGYQTTNVDEAVAAGEMSNIKCVGI 234

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 235 TIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAKTFCLAKDAG 294

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   +     S   +  D L +Y   + +GT  Y++ + G   
Sbjct: 295 FKVVSHMMPDLPNVGMERDLDQFIEYFSNPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 354

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 355 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 410

Query: 279 GPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           G    S   V +  V I+  KH   P+  +++VR++  A    E FL+ E    + L+  
Sbjct: 411 G---TSCRDVRTREVGINEVKHKIRPDQ-VELVRRDYTANGGWETFLAYEDPKQDILIAL 466

Query: 335 LRLRE 339
           LRLR+
Sbjct: 467 LRLRQ 471


>gi|224543026|ref|ZP_03683565.1| hypothetical protein CATMIT_02220 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524051|gb|EEF93156.1| hypothetical protein CATMIT_02220 [Catenibacterium mitsuokai DSM
           15897]
          Length = 310

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSI---FFGGGTPSLIE 85
           C +C         + G  +FI    S L + +   ++   +   ++   +F   T +   
Sbjct: 51  CIFCS--------EKGSGDFILDSDSLLEQFKAGAEVMKRKWPDAVFIPYFQAYTNTYAS 102

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
              +  I +       +   V I I      +        +   K     I LG+Q++ +
Sbjct: 103 LDQLKKIYE---PFIGMKDVVGIAIATRADCLTEEICAYLEELSKKTDVYIELGLQTIHD 159

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H   E +  + + R     +   +I  LP +T+       +      +  +
Sbjct: 160 TTAKEINRCHTYQEFLDGLSMLRRHHLEVCVHIINGLPNETIEMMLETAKAVGKLDIQGI 219

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
            ++ L + + +  YK++    +
Sbjct: 220 KIHNLYVTQNSRLYKLYYPFKM 241


>gi|195035705|ref|XP_001989312.1| GH10129 [Drosophila grimshawi]
 gi|193905312|gb|EDW04179.1| GH10129 [Drosophila grimshawi]
          Length = 561

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMALSEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H         ++ ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCETFNMGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTVCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|227112763|ref|ZP_03826419.1| hypothetical protein PcarbP_07364 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 309

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 80/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   +S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEQMQQRSIAQQLEAQAGKVNRAKRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V I +   P  V            + G      LG+QS  +++L  
Sbjct: 97  LESMYQEALKQAEMVGICVGTRPDCVPDAVLDLLSRYHEQGYEVWLELGLQSACDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +        L++ +   V+ + L+ L
Sbjct: 157 INRGHDFACYQETTRRARERGLKVCSHLIVGLPGEDAQHCLSTLEQVVETGVEGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L   + +  V++       T    ++   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPELALDRYVEIAGEMIRHTPPEVIYH-RISASAR 266


>gi|219667392|ref|YP_002457827.1| hypothetical protein Dhaf_1335 [Desulfitobacterium hafniense DCB-2]
 gi|219537652|gb|ACL19391.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
          Length = 328

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC        +    E  I     E++ +       +    +F   T +      +  
Sbjct: 58  CIYCS-ARGSGDFAGQAEKSIHEQFCEIKEVMNRKWSSARYLAYFQAYTNTYAP---LKR 113

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +   +       V ++I   P  +         +        + LG+QS+ ++++ ++
Sbjct: 114 LQEVYEQALAEEGVVGLSIATRPDCLPAEVLDYLEELNQRTYLWVELGLQSIHDRTMEWV 173

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           GR H   + +  +   R    R+   +IY LP +T+       Q      V  + L+ L 
Sbjct: 174 GRGHTFEDFLQGLDKLRRRNIRVCTHMIYGLPGETLEDMFGSAQTLAKLDVQGVKLHLLH 233

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT    +++     L S++  + L   T  I  A  +  
Sbjct: 234 VLKGTPLADIYEQSPFPLLSQDEYIHLICDTLEILPAQTVIH 275


>gi|154151496|ref|YP_001405114.1| ELP3 family histone acetyltransferase [Candidatus Methanoregula
           boonei 6A8]
 gi|154000048|gb|ABS56471.1| histone acetyltransferase, ELP3 family [Methanoregula boonei 6A8]
          Length = 526

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS--NVEITIEAN 113
              +++  +    R I ++           P  +    +G+     +S    V IT E  
Sbjct: 156 ARPIEYQHEFVA-RCIEAMNLYPENTPAASPPAV----EGVQSANEISDVRCVAITFETR 210

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P      +       GV ++ LGVQ L+++ L F  R    ++   A  L R+   ++ F
Sbjct: 211 PDWCRKEHINRMLDLGVTKVELGVQHLDDEILAFNRRGCTVADTAEANRLLRDAGIKVGF 270

Query: 174 DLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            ++  LP  T+   +     L     +  D L +Y   +  G+   ++ +        E 
Sbjct: 271 HMMPNLPHSTIAADKAMFETLFSDPRFKPDFLKIYPTLVTPGSEIEELWELKRYAPYDEE 330

Query: 231 VAVDLYNLTQ 240
             +DL    +
Sbjct: 331 TLIDLIAYAK 340


>gi|148269877|ref|YP_001244337.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|61657399|emb|CAI44315.1| hypothetical protein [Thermotoga petrophila]
 gi|147735421|gb|ABQ46761.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
          Length = 397

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 83/256 (32%), Gaps = 30/256 (11%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC       R    ++      + +  +   + + +   P S 
Sbjct: 138 GIYMPIEITRGCPFSCAYCQTPIIAGRQVRHRDVDVVVHYAKLGVKHGRKLARFIAPNSF 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAG 129
                 G TP++   + I  +L G+ K   +          E  P SV     +  +K  
Sbjct: 198 GYGSKNGVTPNV---EKIEELLYGL-KRVGIEEIYFGTFPSEVRPESVTDEVLKVVKKYV 253

Query: 130 VNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR I +G QS  ++ L+ + R H   +   AI            D I+  P +T    E
Sbjct: 254 NNRSIVIGAQSGSDRILKIIKRGHTVEQVEEAIEKISLHGFIPHVDFIFGFPFETEEDVE 313

Query: 189 MELQRALSYAVDH----LSLYQLTIEKGTLFYKM-------HKDGDLVLPSENVAVDLYN 237
                 +   V+     +  +      GT  +              L   +    +D Y 
Sbjct: 314 KTFSFIVKI-VERYGAKIHAHTFMPLPGTELFNAGPGRLTEVHYKFLGRLASKGILDGYW 372

Query: 238 LTQSITSAHGLHAYEI 253
           + Q + +      YEI
Sbjct: 373 MKQEMLA---RKVYEI 385


>gi|114566452|ref|YP_753606.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337387|gb|ABI68235.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 292

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 16/235 (6%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K  +   +   + +++  +   G   +  +F   G    +E  +
Sbjct: 27  HNRCTFCS----MYKDKKYRVRSLDEVMADIRMAKLYYGD--LEKVFLADGDALAVETGD 80

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +  I+  + KN    S   I I A+P S+   ++   +  ++AG+    LGV++ + + L
Sbjct: 81  LVKIIAELKKN--FYSLRHIGIYASPDSILSKDIEELKRLKEAGLTIAYLGVETGDPELL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHL 202
           + + +     E + A    R     +S  ++  L     Q +       Q       D++
Sbjct: 139 KDIKKGVTYEEMVEAGKKIREAGILLSVTVLLGLAGRTPQAVDHARKTAQILNEMNPDYV 198

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               L +E  T  Y+  + G+  LP     +D   +        G      SNH+
Sbjct: 199 GALTLMLEPRTPLYRKMQRGEFELPGPFEILDEMRIMIENLELEGTEFR--SNHA 251


>gi|170288563|ref|YP_001738801.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|170176066|gb|ACB09118.1| Radical SAM domain protein [Thermotoga sp. RQ2]
          Length = 397

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 83/256 (32%), Gaps = 30/256 (11%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC       R    ++      + +  +   + + +   P S 
Sbjct: 138 GIYMPIEITRGCPFSCAYCQTPIIAGRQVRHRDVDVVVHYAKLGVKHGRKLARFIAPNSF 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAG 129
                 G TP++   + I  +L G+ K   +          E  P SV     +  +K  
Sbjct: 198 GYGSKNGVTPNV---EKIEELLYGL-KRVGIEEIYFGTFPSEVRPESVTDEVLKVVKKYV 253

Query: 130 VNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR I +G QS  ++ L+ + R H   +   AI            D I+  P +T    E
Sbjct: 254 NNRSIVIGAQSGSDRILKIIKRGHTVEQVEEAIEKISLHGFIPHVDFIFGFPFETEEDVE 313

Query: 189 MELQRALSYAVDH----LSLYQLTIEKGTLFYKM-------HKDGDLVLPSENVAVDLYN 237
                 +   V+     +  +      GT  +              L   +    +D Y 
Sbjct: 314 KTFSFIVKI-VERYGAKIHAHTFMPLPGTELFNAGPGRLTEVHYKFLGRLASKGILDGYW 372

Query: 238 LTQSITSAHGLHAYEI 253
           + Q + +      YEI
Sbjct: 373 MKQEMLA---RKVYEI 385


>gi|227326660|ref|ZP_03830684.1| hypothetical protein PcarcW_04784 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 309

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 80/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   +S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEQMQQRSIAQQLEAQAGKVNRAKRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V            + G      LG+QS  +++L  
Sbjct: 97  LESMYQEALKQAEMVGLCVGTRPDCVPDAVLDLLSRYHEQGYEVWLELGLQSACDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +   +    L++ +   V+ + L+ L
Sbjct: 157 INRGHDFACYQETTRRARERGLKVCSHLIVGLPGEDAQRCLSTLEQVIETGVEGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L   + +  V+        T    ++   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPELALDRYVETAGEMIRHTPPDVIYH-RISASAR 266


>gi|320352170|ref|YP_004193509.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320120672|gb|ADW16218.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 313

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 88/231 (38%), Gaps = 20/231 (8%)

Query: 13  GQGSNSLGVYVHWPFCVKK----CPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTG 67
           GQ    + + +  P C  +    C YC        +             ++ +    L  
Sbjct: 18  GQTVGKIPLDLGIP-CPNRARGGCLYC----QPASFTPAFLRAADPLAEQISRGKASLLA 72

Query: 68  PRSISSI-FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY- 125
            R      +F   TP+ +       +L  + +  +    + + +   P ++  +      
Sbjct: 73  GRFTRYFAYFQQETPTAL---ATIDLLPHLQRMLSDPDCLGLILSTRPDTIAADLPAALA 129

Query: 126 ----RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALP 180
               +      + LGVQS+ ++SLR L RNH  ++ +AA+     +    +   LI  +P
Sbjct: 130 DLIQKTGKACLVELGVQSIHDRSLRLLNRNHCFADFLAAVDRLHAVQRIEIGAHLILGIP 189

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            ++  +    ++   +  + HL L+ L + + T  ++++  G + + ++  
Sbjct: 190 GESEAEMLATVRTVCALPLQHLKLHHLQVIRDTPLHRLYTQGQVPVWNQEA 240


>gi|317503179|ref|ZP_07961240.1| TIGR01212 family radical SAM protein [Prevotella salivae DSM 15606]
 gi|315665682|gb|EFV05288.1| TIGR01212 family radical SAM protein [Prevotella salivae DSM 15606]
          Length = 305

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 17/215 (7%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           YCD +  V       ++F      +M+++            +F   + +    Q +  + 
Sbjct: 55  YCDRHKSVTEQLEVGKSFFSHKYPDMKYLA-----------YFQAYSNTYASLQQLKALY 103

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQ---GYRKAGVNRISLGVQSLEEQSLRFLGR 150
           +   +   V   V + I   P  V         G +K     +  G++S+ + +L+ + R
Sbjct: 104 EEALQ---VEDVVGLVIGTRPDCVNDELLDYLVGLQKHTFVLVEYGIESVNDDTLKRINR 160

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+ +    AI             +I  LP +   +   + +   S  +D L ++Q+ I 
Sbjct: 161 GHDFACCQQAIMKTHACGLLCGGHIILGLPGEDAAESIRQAKIISSLPLDILKIHQMQII 220

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +GT      +     + S    + L     S    
Sbjct: 221 RGTRLAAEFRATPFHVYSVEEYIRLVADYISYLRP 255


>gi|312220834|emb|CBY00775.1| similar to elongator complex protein 3 [Leptosphaeria maculans]
          Length = 625

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 131/386 (33%), Gaps = 62/386 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 168 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQIKSL 227

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDGIAKNWTVSSN-------------VEI 108
                 +  I  GG     P     + I+ + + ++   T   +             V I
Sbjct: 228 GHSVDKVEYIIMGGTFMSLPESYRDEFISQLHNALSGYQTKDVDEAVAAGEMSNIKCVGI 287

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 288 TIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAKTFCLSKDAG 347

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   +         +  D L +Y   + +GT  Y++ + G   
Sbjct: 348 FKVVSHMMPDLPNVGMERDLDQFVEYFSNPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 407

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 408 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 463

Query: 279 GPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           G    S   V +  V I+  KH   P+  +++VR++  A    E FL+ E    + L+  
Sbjct: 464 G---TSCRDVRTREVGINEVKHKIRPDQ-VELVRRDYTANGGWETFLAYEDPKQDILIAL 519

Query: 335 LRLREGISVKDWE-MLAGRNLDIECE 359
           LRLR+      +   L G+   +  E
Sbjct: 520 LRLRQCSKEHTFRPELTGQPTSLVRE 545


>gi|242793759|ref|XP_002482232.1| histone acetyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218718820|gb|EED18240.1| histone acetyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 570

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 124/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 176

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        I+ + + ++   T + +             V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPEDYRDSFISQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 237 TIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   +         +  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLDQFVEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 357 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 412

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 413 GTTCRDVRTREVGINEVKNKIRPSQ-IELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 471

Query: 338 REGISVKDWE-MLAGR 352
           R+  +   +   L G+
Sbjct: 472 RKCSATHTFRPELTGQ 487


>gi|111226312|ref|XP_001134514.1| elongation protein 3 [Dictyostelium discoideum AX4]
 gi|122070582|sp|Q1ZXC6|ELP3_DICDI RecName: Full=Probable elongator complex protein 3
 gi|90970474|gb|EAS66831.1| elongation protein 3 [Dictyostelium discoideum AX4]
          Length = 559

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 122/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVK------KCPYC------DF----NSHVRRYKVGQENFIQSF------LTEMQWMRQL 65
           C         C YC      DF     S+              +         +  +++L
Sbjct: 111 CPHLAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRIDQLKRL 170

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN--WTVSS-----------NVEI 108
                       GGT   +        I  + D ++ +    V+             V I
Sbjct: 171 GHNVEKVEFIIMGGTFMSLPSDYRDYFIRNLHDALSGHTSNNVAEAVKYSEQSNVKCVGI 230

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H     + +  LA++  
Sbjct: 231 TIETRPDHCLKLHLSNMLTYGCTRLEIGVQSVFEDIARDTNRGHTVRAVLESFQLAKDSG 290

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +     ME     ++  D L +Y   + +GT  Y++ K G   
Sbjct: 291 FKVVAHMMPDLPNMGMERDIYGFMEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGTYK 350

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIGI 278
             S +  VDL     ++        Y I          S +   +L  L   R  D    
Sbjct: 351 NYSPDSLVDLIAKVLALVPPWTRI-YRIQRDIPMPLVTSGVEYGNLRELCLARMKD---F 406

Query: 279 GPGAHSRVKVGSHRVAISIEKHPE---SWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           G    ++ +    R     E H +     ++++R++  A    E FLS E    + L+  
Sbjct: 407 G----TKCRDVRTREVGIQEVHHKIKPDQVELIRRDYVANGGWETFLSFEDPKQDILIGL 462

Query: 335 LRLRE 339
           LRLR+
Sbjct: 463 LRLRK 467


>gi|261819660|ref|YP_003257766.1| hypothetical protein Pecwa_0306 [Pectobacterium wasabiae WPP163]
 gi|261603673|gb|ACX86159.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 309

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 82/232 (35%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   +S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEQMQQRSIAQQLEAQAGKVNRAKRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           +     +    +  V + +   P  V         +   +R     + LG+QS  +++L 
Sbjct: 97  LESMYQEALKQAEMVGLCVGTRPDCVPDAVLDLLSRYH-DRGYEVWLELGLQSACDKTLH 155

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+ +        AR    ++   LI  LP +   +    L++ +   V+ + L+ 
Sbjct: 156 RINRGHDFACYQETTRRARERGLKVCSHLIVGLPGEDAQRCLSTLEQVVETGVEGIKLHP 215

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           L I +G+   K  + G L   + +  V+        T    ++   IS  + 
Sbjct: 216 LHIVEGSTMAKAWRAGRLPELALDRYVETAGEMIRHTPPDVIYH-RISASAR 266


>gi|328953123|ref|YP_004370457.1| Conserved hypothetical protein CHP01212 [Desulfobacca acetoxidans
           DSM 11109]
 gi|328453447|gb|AEB09276.1| Conserved hypothetical protein CHP01212 [Desulfobacca acetoxidans
           DSM 11109]
          Length = 314

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 81/226 (35%), Gaps = 15/226 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQ----WMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C YC+     R    G      S   ++Q     + +    R   + +F   + +    +
Sbjct: 49  CIYCN----TRGSGTGAHALGHSITQQIQEGMIRLGRRYQARKFIA-YFQSFSNTYGPLE 103

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI---SLGVQSLEEQS 144
           ++  +    A+       V ++I   P  +  +  +         +    LG+QS  +++
Sbjct: 104 HLQSL---YAEALAFPQVVGLSIGTRPDCLSPDLLKLLGSLAQTHLVWLELGLQSAHDRT 160

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR + R H+A+  + A++ A +    +   ++  LP ++            +  VD + L
Sbjct: 161 LRLINRGHDAACFVKAVNTAAHRGVHLLAHVMLGLPGESKADMLATATFLGTLPVDGVKL 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + + KGT   +++  G          + L      +     +  
Sbjct: 221 HLVYVIKGTPLAELYDTGIYRPLLREEYISLVVEVIELLPPQMIIH 266


>gi|154312748|ref|XP_001555701.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150849777|gb|EDN24970.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 581

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 77/423 (18%), Positives = 133/423 (31%), Gaps = 73/423 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 120 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 179

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTVSS----------NVEI 108
                       GGT   +           +   L G   N    +           V I
Sbjct: 180 GHSVDKVEYIIMGGTFMSLSESYRDGFISQLHNALSGYQGNNVDEAVQAGEMSNIKCVGI 239

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 240 TIETRPDYCLQPHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVASVAETFCLAKDAG 299

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 300 FKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 359

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 360 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 415

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 416 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANKGWETFLAYEDPKQDILIGLLRL 474

Query: 338 REGISVKDWE-MLAGRNLDIECE---------------RNLQRQGF--IERVQFSRLRCT 379
           R+      +   L G+   I  E               R  Q QG+  +   +  R+   
Sbjct: 475 RKCSKTHTFRPELTGQPTSIIRELHVYGSAVPVHARDPRKFQHQGYGTLLMEEAERIARN 534

Query: 380 QRG 382
           + G
Sbjct: 535 EHG 537


>gi|126179989|ref|YP_001047954.1| ELP3 family histone acetyltransferase [Methanoculleus marisnigri
           JR1]
 gi|125862783|gb|ABN57972.1| histone acetyltransferase, ELP3 family [Methanoculleus marisnigri
           JR1]
          Length = 530

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           T E  P      +       GV ++ LGVQ ++++ L +  R H  ++++AA  L R+  
Sbjct: 211 TFETRPDWCREEHIDRMLSMGVTKVELGVQHVDDRLLDYNRRGHAVADSVAANCLLRDAG 270

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++ F ++  LP  ++        EL     +  D L +Y   +  G+    + + G+ +
Sbjct: 271 LKVGFHMMPNLPAASIEDDRRMFRELFADPRFRPDFLKIYPTLVTPGSEIEALWERGEYL 330

Query: 226 LPSENVAVDLYNLTQSITSAHGLHA 250
             +E V +DL    +S+   +    
Sbjct: 331 PYTEEVLIDLVAYAKSLLPEYVRLQ 355


>gi|74318205|ref|YP_315945.1| hypothetical protein Tbd_2187 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057700|gb|AAZ98140.1| Conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 316

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 76/224 (33%), Gaps = 11/224 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+ N           + +  F      + + TG R   + +F   T +      +  
Sbjct: 46  CTFCN-NKSFAPGAREPASLVAQFDRARGRIGRATGARRFIA-YFQAYTNTYAHVDELRA 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           + D       V   V + I   P  V         +   +R     + LG+QS  + +L 
Sbjct: 104 LYDSALAAPDV---VGLAIGTRPDCVPPPVLALLAEYR-DRGHEVWLELGLQSSFDATLA 159

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H  +E   A   AR +   +   LI  LP +  +   + L R L   VD L L+ 
Sbjct: 160 RVNRGHGFAEYRTATRAARALGIPVCCHLIVGLPGEDESHSHVSLDRVLDIGVDGLKLHP 219

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + K T      K G+     E     +       T    ++ 
Sbjct: 220 LHVVKHTKLAIEWKRGEYQPLDEADYTRIAADLIERTPWDVVYH 263


>gi|224436404|ref|ZP_03657424.1| hypothetical protein HcinC1_00595 [Helicobacter cinaedi CCUG 18818]
          Length = 320

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 32  CPYCD---F-NSHVRRYKVGQENFIQSFLTE-------MQWMRQLTGPRSISSIFFGGG- 79
           C YCD   F  S ++  K+ Q     S  T         Q   Q           FG G 
Sbjct: 43  CIYCDNESFSPSLIKLDKISQVKMNFSLTTNPLLEKQLHQLEEQFCWHSEFHQRKFGVGK 102

Query: 80  --------TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
                   T +      +  + D       V   V ++I      VE    +   +   N
Sbjct: 103 YMVYFQSYTNTYAPFDTLKALYDKALSFPNV---VGLSIGTRIDCVEDRLLELLGEYVKN 159

Query: 132 R----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
                +  G+QS+ +++L    R H+ + A       R    ++   LIY LP++T    
Sbjct: 160 GKEIWLEYGIQSVYDKTLELTNRAHSIAGAKEMFEKTRAKGVKVCAHLIYGLPEETPEMM 219

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              L   L + ++ + ++ L +  GT   K++K+G     +  
Sbjct: 220 LHSLDCVLEWGINGIKIHPLYVVNGTRLAKLYKEGKYEPITME 262


>gi|20089710|ref|NP_615785.1| histone acetyltransferase [Methanosarcina acetivorans C2A]
 gi|19914640|gb|AAM04265.1| histone acetyltransferase [Methanosarcina acetivorans C2A]
          Length = 547

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 8/183 (4%)

Query: 93  LDGIAKNWTVSS--NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           L+ + K   V+   NV IT E  P      +   + + G  ++ LGVQS+ +  L  + R
Sbjct: 201 LEEVQKANEVADIRNVGITFETRPDWAAEEHVDEFLRLGGTKVELGVQSVYDFILTRMQR 260

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQL 207
            H  +E + A  + R+   ++ F ++  LP           ++      +  D+L +Y  
Sbjct: 261 GHGVAEIVRANRVLRDSAFKVGFHMMPHLPGANSELDLRGFKKLFEDPRFRPDYLKIYPT 320

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESL 264
            + +GT  Y+M + G+    S+  A +L    +S+            +I  H        
Sbjct: 321 LVTEGTALYRMWEAGEYQALSDEEAAELVADIKSVLPKWVRLQRIQRDIPAHQIFAGVRK 380

Query: 265 HNL 267
            NL
Sbjct: 381 SNL 383


>gi|262408391|ref|ZP_06084938.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643346|ref|ZP_06721167.1| radical SAM protein, TIGR01212 family [Bacteroides ovatus SD CC 2a]
 gi|294808205|ref|ZP_06766971.1| radical SAM protein, TIGR01212 family [Bacteroides xylanisolvens SD
           CC 1b]
 gi|262353943|gb|EEZ03036.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641317|gb|EFF59514.1| radical SAM protein, TIGR01212 family [Bacteroides ovatus SD CC 2a]
 gi|294444614|gb|EFG13315.1| radical SAM protein, TIGR01212 family [Bacteroides xylanisolvens SD
           CC 1b]
          Length = 326

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKSITTQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  TV   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 103 LKRKYEEALTVDGVVGLVIGTRPDCMPESLLRYLEELNKHTFLMVEYGIESTCDETLKRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +AA+             +I  LP +T      + +      +  L ++QL 
Sbjct: 163 NRGHTYADTVAAVRRTAACGILTGGHIILGLPGETHDTMVAQAEILSDLPLATLKIHQLQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     + +        N   +   L       
Sbjct: 223 LIRGTRMAHEYDEAPDGFHLFNEVEEYIGLVIDYVEH 259


>gi|237714233|ref|ZP_04544714.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229445725|gb|EEO51516.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 324

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E +       P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKSITTQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  TV   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 101 LKRKYEEALTVDGVVGLVIGTRPDCMPESLLRYLEELNKHTFLMVEYGIESTCDETLKRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +AA+             +I  LP +T      + +      +  L ++QL 
Sbjct: 161 NRGHTYADTVAAVRRTAACGILTGGHIILGLPGETHDTMVAQAEILSDLPLATLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     + +        N   +   L       
Sbjct: 221 LIRGTRMAHEYDEAPDGFHLFNEVEEYIGLVIDYVEH 257


>gi|206889257|ref|YP_002247930.1| radical SAM protein, family [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741195|gb|ACI20252.1| radical SAM protein, family [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 312

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 78/222 (35%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ +S         +  I      + +++     ++   ++F   T +     ++  
Sbjct: 43  CIYCNNDSFRPSSCAPSKPLIDQIKNGIGYLKARYKAKAF-LVYFQPYTNTYAPIDHLEK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +      +  V   V + I   P  V+    +  +         +  G+QS+ E+SL ++
Sbjct: 102 LYKEALSHPEV---VGLAIGTRPDCVDDEKLELLQMLSKTHMIIVEYGMQSIYEKSLAYI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ S  + A++        +   +I  +P +T  +          + +  L ++QL 
Sbjct: 159 MRGHDYSTFLKAVYNTHERGILVGAHIIVGIPTETREESLAMADEINLHPIKFLKIHQLQ 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + K TL   +++     +      +D             +  
Sbjct: 219 VVKDTLLAYIYERDPFPVFEYENYLDFIVDFIERLRQDIVIQ 260


>gi|325183062|emb|CCA17517.1| histone acetyltransferase gcn5type hat putative [Albugo laibachii
           Nc14]
          Length = 541

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 79/420 (18%), Positives = 136/420 (32%), Gaps = 81/420 (19%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+     Q  R 
Sbjct: 94  CPHIAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYHPYVQTKHRVDQLKRL 153

Query: 65  LTGPRSISSIFFGGGTPSLIEPQ------NIALILDG-------------IAKNWTVSSN 105
                 +  I  GG   + +          I  + D                   +    
Sbjct: 154 GHSVDKVEFIVMGG---TFLSLDRSYRDYFIRNLHDALSGHSSSSVEEAVRYSEHSDVKC 210

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
             ITIE  P     ++       G  RI +GVQS+ E   R   R H  +    +  LA+
Sbjct: 211 TAITIETRPDYCLKSHLNDMLSYGCTRIEIGVQSVYEDVARDTNRGHTVAAVCHSFQLAK 270

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   L+  LP   + +      E     ++  D L +Y   + +GT  Y++ K G
Sbjct: 271 DCGYKIVAHLMPDLPNMGLERDILGFKEFFENPAFRTDGLKIYPTLVIRGTGLYEIWKTG 330

Query: 223 DLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYG 273
                S +  V    L   + +        Y +     +     G E  +L  L   R  
Sbjct: 331 KYKNYSPDELV---ELMAKLLALVPPWTRVYRVQRDIPMPLVTSGVENGNLRELALARMK 387

Query: 274 DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
           D +G+        +VG   +           +++VR++  A    E FL+ E      L+
Sbjct: 388 D-LGLTCNDVRTREVGIKGIHEQQTPDQ---VELVRRDYVANEGWETFLAYEDPKQNILI 443

Query: 333 MGLRLRE------------GISVKDWEMLAGRNLDIECERN--LQRQGF--IERVQFSRL 376
             LRLR+            G S+     + G ++ + C      Q QGF  +   +  R+
Sbjct: 444 GLLRLRKASSASFRAEIPIGCSIVRELHVYGSSIPLHCRDPTKFQHQGFGTLLMEEAERI 503


>gi|313142922|ref|ZP_07805115.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313127953|gb|EFR45570.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 317

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 32  CPYCD---F-NSHVRRYKVGQENFIQSFLTE-------MQWMRQLTGPRSISSIFFGGG- 79
           C YCD   F  S ++  K+ Q     S  T         Q   Q           FG G 
Sbjct: 40  CIYCDNESFSPSLIKLDKISQVKMNFSLTTNPLLEKQLHQLEEQFCWHSEFHQRKFGVGK 99

Query: 80  --------TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
                   T +      +  + D       V   V ++I      VE    +   +   N
Sbjct: 100 YMVYFQSYTNTYAPFDTLKALYDKALSFPNV---VGLSIGTRIDCVEDRLLELLGEYVKN 156

Query: 132 R----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
                +  G+QS+ +++L    R H+ + A       R    ++   LIY LP++T    
Sbjct: 157 GKEIWLEYGIQSVYDKTLELTNRAHSIAGAKEMFEKTRAKGVKVCAHLIYGLPEETPEMM 216

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              L   L + ++ + ++ L +  GT   K++K+G     +  
Sbjct: 217 LHSLDCVLEWGINGIKIHPLYVVNGTRLAKLYKEGKYEPITME 259


>gi|145298656|ref|YP_001141497.1| hypothetical protein ASA_1668 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851428|gb|ABO89749.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 311

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 27/273 (9%)

Query: 2   KYLSAYENNM---TGQGSNSLGVYVHWPF-CVKK--------CPYCDFNSHVRRYKVGQE 49
           + ++ +  ++    GQ  + L   +H  F C  +        C +C+  S        Q 
Sbjct: 5   ELVNTFGQDLKQRHGQKIHKLS--IHGAFTCPNRDGTLGRGGCTFCN-VSSFADESAQQL 61

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
           + +Q  L      R           +F   T +  E + +  + +       VS  V + 
Sbjct: 62  SVVQQLL----ARRDEVTRAKRYLAYFQAYTSTYAEVEYLQRMYEEALS---VSDMVGLC 114

Query: 110 IEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           +   P  V                   + LG+QS  +++L+ + R H  +    A+  A 
Sbjct: 115 VGTRPDCVPDAVLDLLAAYQARGYEVWLELGLQSANDKTLQRINRGHGYAAYADAVARAH 174

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
               ++   LI  LP +        L R ++  V+ + L+ L + +G+   K  + G L 
Sbjct: 175 QRGIKVCAHLIVGLPGEVPMDSLDTLHRIVATGVEGIKLHPLHVVEGSTLGKAWQAGRLE 234

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + S +  V+        T    ++   IS  + 
Sbjct: 235 VLSLDQYVEAAVAMIQHTPPEVVYH-RISASAR 266


>gi|115944396|ref|XP_001194728.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 413

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 42/234 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   + I
Sbjct: 93  CPHISMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRVDQLKQI 152

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +  +     I  + D ++ +              + +  + I
Sbjct: 153 GHSVDKVEFIVMGGTFMALSEEYRDYFIRNLHDALSGHTSNSVEEAVKFSERSRTKCIGI 212

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     K G  R+ +GVQS+ E   R   R H       +  ++++  
Sbjct: 213 TIETRPDYCLKRHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQMSKDAG 272

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
            ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ 
Sbjct: 273 FKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELW 326


>gi|261211477|ref|ZP_05925765.1| hypothetical protein VCJ_001738 [Vibrio sp. RC341]
 gi|260839432|gb|EEX66058.1| hypothetical protein VCJ_001738 [Vibrio sp. RC341]
          Length = 312

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 81/224 (36%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +E   +S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFAN-----EETQQKSIQEQLKDRAGEIKRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +        G      LG+Q+  +Q+L+ 
Sbjct: 97  LKSMYEQALEEADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLELGLQTAHDQTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR++  ++   LI  LP +  +     LQ+ L    D + L+ L
Sbjct: 157 INRGHDFACYAEITAKARSLGIKVCTHLIVGLPGEGRSDNLATLQQVLKVGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
            I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 217 HIVEGSTMAKAWRAGRLTVLEQDEYVSIACEMIRSTPPQIIYHR 260


>gi|158520981|ref|YP_001528851.1| putative radical SAM protein [Desulfococcus oleovorans Hxd3]
 gi|158509807|gb|ABW66774.1| conserved hypothetical radical SAM protein [Desulfococcus
           oleovorans Hxd3]
          Length = 311

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 33/243 (13%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C  +        C YC+     R    G      +    +    QL   R + +      
Sbjct: 33  CPNRDGTLSSGGCIYCN----ARGSGTG------AHARGLSVTDQLLAGRQVMTRRFKAK 82

Query: 74  ---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
               +F   T +      +  + D   +   V   V I +   P  V+            
Sbjct: 83  KFIAYFQAYTNTYAPVDRLKALYD---EALAVPDMVGIAVGTRPDCVDDAVLDLLASYAK 139

Query: 131 NR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
                + +GVQS  +++L  + R H+ +   +A+  A +    +   +I  LP ++  + 
Sbjct: 140 QHMVWLEIGVQSALDRTLAIINRGHDTACTTSAVQAAVDRGLLVCGHIILGLPGESREEM 199

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
               +      +  +  + L + +GT    M  +GD     +   VD       +     
Sbjct: 200 VETGRYIADLGMAGVKFHVLYVVRGTPLAAMSGNGDYRCMEQQDYVDAVCDVLEVLPPTM 259

Query: 248 LHA 250
           +  
Sbjct: 260 VIQ 262


>gi|153005269|ref|YP_001379594.1| radical SAM domain-containing protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152028842|gb|ABS26610.1| Radical SAM domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 495

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 63/203 (31%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C +C      +   + +  F    L  ++   +     ++ +      TPS +   
Sbjct: 257 CAWACRFC------QTPFLFRARFRHRSLESIRRWARHLA--ALETRDLRVLTPSALSWG 308

Query: 87  --------QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNR-IS 134
                     I  +L  + +       +       E  P  V        R+   NR + 
Sbjct: 309 SPDGGCDLAAIEALLATLREAIGPDRRLFVGSFPSELRPEHVSAEALALLRRYCDNRTLV 368

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G QS  ++ L  + R H+A     A  LA       S D I+ LP +T         + 
Sbjct: 369 IGGQSGSDRLLVSMRRGHDAESVTRAARLALEAGFTPSVDFIFGLPGETEDDRIATRGQM 428

Query: 195 LSYAVDHLSLYQLTIE--KGTLF 215
              A     ++        GT +
Sbjct: 429 QGLAAMGARVHAHAFMPLPGTPW 451


>gi|147678318|ref|YP_001212533.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI]
 gi|146274415|dbj|BAF60164.1| predicted Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI]
          Length = 324

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 38/252 (15%)

Query: 23  VHWPF-CVKK--------CPYCD-----F----NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           V+ P  C  +        C +CD     F    ++   + ++ +            + R+
Sbjct: 26  VNLPGTCPNRDGRLGRGGCIFCDETGAGFECLPSTVPIKKQISESR---------AFFRK 76

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
               R    ++F   T + +         D + +       V I++   P  V       
Sbjct: 77  RFNARKFI-VYFQAFTNTYLP---FERFRDNVLQVAGEEDVVGISVSTRPDCVNDRYLDF 132

Query: 125 Y------RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
                  +K  VN I LG+Q++   +L  + R H  +E I A+   +         LI  
Sbjct: 133 LSWFKEEQKLDVN-IELGLQTVNYHTLEKVNRGHTLAEFIDAVLRVKRYGFDTCVHLILN 191

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           LP   M       +   +  ++++ L+ L + +GT+   M++ G+  +      V     
Sbjct: 192 LPWDNMDDVVENAKVLSALGIEYVKLHSLYVVRGTVLGDMYERGEFEIIPMEEYVKRVAT 251

Query: 239 TQSITSAHGLHA 250
                    +  
Sbjct: 252 FLEYLDPAVVIQ 263


>gi|19920684|ref|NP_608834.1| elongator complex protein 3 [Drosophila melanogaster]
 gi|74870482|sp|Q9VQZ6|ELP3_DROME RecName: Full=Probable elongator complex protein 3
 gi|7295707|gb|AAF51012.1| elongator complex protein 3 [Drosophila melanogaster]
 gi|19528489|gb|AAL90359.1| RE35395p [Drosophila melanogaster]
 gi|220948416|gb|ACL86751.1| Elp3-PA [synthetic construct]
 gi|220957548|gb|ACL91317.1| Elp3-PA [synthetic construct]
          Length = 552

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|229521206|ref|ZP_04410626.1| hypothetical protein VIF_001730 [Vibrio cholerae TM 11079-80]
 gi|229341738|gb|EEO06740.1| hypothetical protein VIF_001730 [Vibrio cholerae TM 11079-80]
          Length = 316

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALKEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L  L  +        + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSIACEMIRSTPPEIVYHR 264


>gi|195576529|ref|XP_002078128.1| GD23288 [Drosophila simulans]
 gi|194190137|gb|EDX03713.1| GD23288 [Drosophila simulans]
          Length = 552

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|15920920|ref|NP_376589.1| hypothetical protein ST0692 [Sulfolobus tokodaii str. 7]
 gi|15621704|dbj|BAB65698.1| 470aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 470

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 6/169 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T+E  P   +  +     + GV ++ LGVQ++ +  L+   R H   ++I A  + 
Sbjct: 139 CVGMTVETKPDWAKEWHADQMLRLGVTKVELGVQTVYDDILKKTNRGHTVKDSIEATRIL 198

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++ + ++  LP     +       L +   +  D L +Y   + +     ++ K 
Sbjct: 199 KDAGFKIVYHVMLGLPGSDPDKDLEAFKTLFKDPDFRPDMLKIYPTLVVETAPLAELWKR 258

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL 267
           G          V+L +                 +I  +  L      NL
Sbjct: 259 GLYKPYDTETLVELISEMYRYIPPWVRVMRIQRDIPANIILDGNKKGNL 307


>gi|322708228|gb|EFY99805.1| histone acetyltransferase [Metarhizium anisopliae ARSEF 23]
          Length = 576

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 72/379 (18%), Positives = 122/379 (32%), Gaps = 60/379 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 118 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 177

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDG--IAKNWTVSSNVE-----------I 108
                 +  I  GG     P       I+ + +     +   V   VE           I
Sbjct: 178 GHSVDKVEYIIMGGTFMSLPESYREDFISQLHNALSGYQTSKVDEAVEAGEMSNVKCVGI 237

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 238 TIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 297

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 298 FKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 357

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y I     +     G E  +L  L   R  D  
Sbjct: 358 NYTPNGLI---DLVARILALIPPWTRIYRIQRDIPMPLVTSGVENGNLRELALARMKD-- 412

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   +++VR++  A    E FL+ E    + L+  L
Sbjct: 413 -FGTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILVALL 470

Query: 336 RLREGISVKDW-EMLAGRN 353
           RLR+      + E L G+ 
Sbjct: 471 RLRKCTEKYTYREELTGQP 489


>gi|195342461|ref|XP_002037819.1| GM18474 [Drosophila sechellia]
 gi|194132669|gb|EDW54237.1| GM18474 [Drosophila sechellia]
          Length = 552

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|115678728|ref|XP_001198340.1| PREDICTED: similar to elongator component, putative, partial
           [Strongylocentrotus purpuratus]
          Length = 333

 Score = 78.0 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 75/234 (32%), Gaps = 42/234 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   + I
Sbjct: 13  CPHISMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRVDQLKQI 72

Query: 72  SS------IFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +  +     I  + D ++ +              + +  + I
Sbjct: 73  GHSVDKVEFIVMGGTFMALSEEYRDYFIRNLHDALSGHTSNSVEEAVKFSERSRTKCIGI 132

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     K G  R+ +GVQS+ E   R   R H       +  ++++  
Sbjct: 133 TIETRPDYCLKRHLSDMLKYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQMSKDAG 192

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
            ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ 
Sbjct: 193 FKVVSHMMPDLPNVDLERDVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELW 246


>gi|255931935|ref|XP_002557524.1| Pc12g06860 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582143|emb|CAP80313.1| Pc12g06860 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 575

 Score = 78.0 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 126/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              +  ++ L
Sbjct: 119 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKAL 178

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        I+ + + ++   T + +             V I
Sbjct: 179 GHSVDKVEYIIMGGTFMSLPEDYRDSFISQLHNALSGYQTDNVDEAVMAGEMSNVKCVGI 238

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 239 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 298

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + Q       +  D L LY   + +GT  Y++ + G   
Sbjct: 299 FKVVSHMMPDLPNVGMERDLFQFQEYFENPNFRTDGLKLYPTLVIRGTGLYELWRTGRYK 358

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 359 NYTPNALI---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 413

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   ++++R++  A    E FL+ E    + L+  L
Sbjct: 414 -FGTTCRDVRTREVGINEVKNKIRPSQ-IELIRRDYTANGGWETFLAYEDPKQDILIGLL 471

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+      +     G+   I  E
Sbjct: 472 RLRKCTETHTFRPEFTGQQTSIVRE 496


>gi|169350333|ref|ZP_02867271.1| hypothetical protein CLOSPI_01094 [Clostridium spiroforme DSM 1552]
 gi|169293116|gb|EDS75249.1| hypothetical protein CLOSPI_01094 [Clostridium spiroforme DSM 1552]
          Length = 313

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 85/221 (38%), Gaps = 27/221 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF  +V+     Q + + + L      ++  G R I+ 
Sbjct: 39  CPNRDGTKGIGGCIFCSSSGSGDFAGNVKDSLEKQFDDVSAVL-----QKKWPGCRYIA- 92

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
            +F   + +    + +   ++           V I+I   P  +E +  +          
Sbjct: 93  -YFQANSNTYGPVEKLRDCIE---PFINKKDVVAISIATRPDCLEDDILKYLDSVNKRCD 148

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I LG+Q++ +++ + + R H+  E I  ++  R +   +   +I  LP +T       
Sbjct: 149 LWIELGLQTIHDKTAKLINRGHSYLEFINGLNKLRQLNINVCVHIINGLPFETHEMMLTT 208

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           ++      +  L ++ L + K T   +++++ +  + + + 
Sbjct: 209 VKEIGKLDIQALKIHMLYVIKNTKLNQIYQNNEFTMLTRDE 249


>gi|67484318|ref|XP_657379.1| histone acetyltransferase [Entamoeba histolytica HM-1:IMSS]
 gi|56474633|gb|EAL51995.1| histone acetyltransferase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 576

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 82/244 (33%), Gaps = 46/244 (18%)

Query: 32  CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C YC      DF            + +R  +     +IQS     Q  +       +  I
Sbjct: 116 CVYCPGGCDSDFEYSTQSYTGYEPTSMRAVRARYNPYIQSRSRVEQLQKLGHSVEKVEYI 175

Query: 75  FFGGGTPSLIEPQNIAL------ILDGIAKNWTVSSNVE---------------ITIEAN 113
             GG   + +             + D ++ +  VSS VE               +TIE  
Sbjct: 176 IMGG---TFLSMDKHYRDSFILGLFDALSGH--VSSTVEEAVHYGENSKVKCVALTIETR 230

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P     ++ +   + G  R+ +G+QS+ E   +   R H   + I      ++   ++  
Sbjct: 231 PDCCSEDHIREMFRYGTTRLEIGLQSIFEDICKECNRGHTVQDCIGCYKRLKDAGYKIVT 290

Query: 174 DLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            ++  LP     +         S   Y  D L LY   + +GT  Y+M + G     +  
Sbjct: 291 HMMPNLPGVPPERDVFTYSEMFSDGAYQCDGLKLYPCLVIRGTRLYEMWRKGHYHSYTSE 350

Query: 231 VAVD 234
             +D
Sbjct: 351 ETID 354


>gi|326391529|ref|ZP_08213061.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325992410|gb|EGD50870.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 444

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 79/203 (38%), Gaps = 8/203 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +     +  +     + + E++++R L          FG    + +  +
Sbjct: 202 CPYSCFYCS--TTAMWGRNWRGRSAHNIVAEIEYIRSLYPNIC----TFGFVDDNFLVDK 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A     +  +  +  ++     A    +E +  +  +KAG+++I LG++S   + LR 
Sbjct: 256 KRAREFAELLISKNL--DITFGFSARVEHLEYDLLKTLKKAGLSKIFLGIESGSPRILRL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L RN+   E I  +    N+  +++   +  +P +T    +   +   +     +  +  
Sbjct: 314 LHRNYTPYEVIEKVGYIENLGIKVTASFMVGIPFETKDDVDETFKLIKNIPASEIQCHIF 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
           T   GT  ++   +  + L   +
Sbjct: 374 TPFPGTPCFEKPDNFGVKLHVTD 396


>gi|297581001|ref|ZP_06942926.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534827|gb|EFH73663.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 316

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 82/236 (34%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQRQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E Q +  + +   +   +   V + +   P  V     +        G      L
Sbjct: 92  TSTYAEAQVLKSMYEQALEEADI---VGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L  L  +        + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSIACEMIRSTPPEIVYHR 264


>gi|328779703|ref|XP_003249694.1| PREDICTED: probable elongator complex protein 3-like [Apis
           mellifera]
          Length = 551

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 119/365 (32%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEM------QWMRQL 65
           C         C YC      DF     S+              +   +      + ++QL
Sbjct: 100 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPFLQTRHRVEQLKQL 159

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVEI 108
                       GGT   +        I  + D ++ +              + +  + I
Sbjct: 160 GHNVDKIEFIVMGGTFMSLPEDYRDYFIRNLHDALSGHVSSNVDEAVKFSERSRTKCIGI 219

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       +  L+++  
Sbjct: 220 TIETRPDYCLKKHLSDMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLSKDAG 279

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G   
Sbjct: 280 FKVIAHMMPDLPNVDIERDVNQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRYK 339

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
               +V V   +L   I S        Y +          S +   +L  L   R  D  
Sbjct: 340 SYPPSVLV---DLIARILSLIPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL- 395

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
               G   R           I +  + + ++++R++  A    E FLS E    + L+  
Sbjct: 396 ----GTDCRDVRTREVGIQEIHQKVQPYEVELIRRDYIANGGWETFLSYEDPTQDILVGL 451

Query: 335 LRLRE 339
           LRLR+
Sbjct: 452 LRLRK 456


>gi|237807391|ref|YP_002891831.1| hypothetical protein Tola_0616 [Tolumonas auensis DSM 9187]
 gi|237499652|gb|ACQ92245.1| conserved hypothetical protein [Tolumonas auensis DSM 9187]
          Length = 308

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 12/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S              S   ++   +           +F   T +  E   +  
Sbjct: 45  CTFCNVASFADEGTQQL-----SIGEQLAARKDEITRARRYLAYFQAYTSTYAEVAYLQK 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           + +   +   V+  V + +   P  V           ++ G+     LG+QS    +L+ 
Sbjct: 100 MYEEALQ---VADMVGLCVGTRPDCVPDAVLDLLSSYQQQGLEIWLELGLQSAHAATLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ S    A+  AR    ++   LI  LP++   +    LQ+ ++   D + L+ L
Sbjct: 157 INRGHDYSAYADAVERARARNLKICTHLIVGLPEEGNDECLSTLQQVVATGTDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLV 225
            + +G+   K  + G L 
Sbjct: 217 HVVEGSTMAKAWRAGRLQ 234


>gi|291522265|emb|CBK80558.1| radical SAM protein, TIGR01212 family [Coprococcus catus GD/7]
          Length = 321

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 28  CVKKC---PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTP 81
           C  +C     C F S              S   +MQ  R +   R  +     +F   T 
Sbjct: 38  CPNRCDGHGGCTFCSEKGTGFESVWQP-ASVTEQMQHARDVVAKRYKARKFIAYFQNYTN 96

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA------GVNRISL 135
           + +  +     L+  A        VEI++   P  +  +      +       G+N I L
Sbjct: 97  TFMAMELFKAYLEEAAA---FPDVVEISVSTRPDCIRTDYLACLAELQERTHVGIN-IEL 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+    +L  + R H  +E I A+   +     +   LI  LP  T+       +   
Sbjct: 153 GLQTANYHTLDRVHRGHGLAEYIDAVLAIKRYPFTVCTHLIANLPGDTLRDAVETARIVS 212

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               D + ++ L I K +   + +  G L + S+    +   +     
Sbjct: 213 VLHSDIVKIHSLYIAKDSQMAEDYLAGRLTICSKEEYFECVRVMLENL 260


>gi|315928519|gb|EFV07822.1| Oxygen-independent coproporphyrinogen III oxidase [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 112

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 14  QGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSIS 72
           +   SL +Y H PFC   C +C  N      +  +E ++     E+  +  +    R + 
Sbjct: 41  KQDRSLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVV 100

Query: 73  SIFFGGGTPSLI 84
            + FGGGTP+  
Sbjct: 101 QMHFGGGTPTFF 112


>gi|167765524|ref|ZP_02437588.1| hypothetical protein CLOSS21_00018 [Clostridium sp. SS2/1]
 gi|167712709|gb|EDS23288.1| hypothetical protein CLOSS21_00018 [Clostridium sp. SS2/1]
 gi|291558992|emb|CBL37792.1| radical SAM protein, TIGR01212 family [butyrate-producing bacterium
           SSC/2]
          Length = 313

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 24/219 (10%)

Query: 28  CVKK-----CPYCD-----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +     C +C      F       +V     + +   ++   ++    + I+  +F 
Sbjct: 30  CPNRMDGDGCTFCGGVGTGF--EAMNSEVSVSEQLNATKGKI--TKRYKAKKFIA--YFQ 83

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----- 132
             T + +        L   A+   +   V I++   P  +        +K          
Sbjct: 84  NYTNTFLPVDKFEKYLVEAAQTEDI---VGISVSTRPDCITKEYLDCLKKISEEYQVKIS 140

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+Q++  ++L  + R H  +E + A+ +       +   +I  LP   MT      +
Sbjct: 141 MEYGLQTVNYKTLNKINRGHTLAEYLDAVLMTAPYGFEICTHIILNLPGDDMTDVIETAK 200

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              +  V  + L+ L I KG+  Y+ +K+G + L     
Sbjct: 201 ILSALPVQIVKLHSLYIPKGSKMYEEYKEGKITLCDPKE 239


>gi|297566522|ref|YP_003685494.1| RNA modification enzyme, MiaB family [Meiothermus silvanus DSM
           9946]
 gi|296850971|gb|ADH63986.1| RNA modification enzyme, MiaB family [Meiothermus silvanus DSM
           9946]
          Length = 440

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 75/262 (28%), Gaps = 29/262 (11%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           + +     +++       L  +V     C   C YC                    L E+
Sbjct: 120 LSFREELAHHLPPAPQGQLSAFVSIIRGCNHHCTYC---IVPTTRGPEVSRHPDLILREI 176

Query: 60  QWMRQ-------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           + ++        L G    S      G P     + + ++          ++       +
Sbjct: 177 EQLKAAGVVEVTLLGQNVNSYGNDQPGFPKF--AELLRMVGQIGIPRIKFTT-------S 227

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P +      +   +       I L VQS   + LR +GR +     +  I   R   P 
Sbjct: 228 HPVNFTDEVIRAMAETPQVCEYIHLPVQSGSNRVLRRMGREYRREWYLDRIRAIREAMPE 287

Query: 171 M--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +  S D+I   P +T   ++  L        D   ++  +   GT  YK  +D       
Sbjct: 288 VVLSTDIIVGFPGETEEDFQETLSLYDQVGYDSAYMFIYSPRPGTPSYKHFQDL-----P 342

Query: 229 ENVAVDLYNLTQSITSAHGLHA 250
             V V+                
Sbjct: 343 REVKVERLQRLIEKQKQWSYKQ 364


>gi|195471266|ref|XP_002087926.1| GE18291 [Drosophila yakuba]
 gi|194174027|gb|EDW87638.1| GE18291 [Drosophila yakuba]
          Length = 554

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|262192284|ref|ZP_06050440.1| hypothetical protein VIH_002672 [Vibrio cholerae CT 5369-93]
 gi|262031834|gb|EEY50416.1| hypothetical protein VIH_002672 [Vibrio cholerae CT 5369-93]
          Length = 312

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 88  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 145 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L  L  +        + +S       H 
Sbjct: 205 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSIACEMIRSTPPEIVYHR 260


>gi|158296831|ref|XP_317165.4| AGAP008300-PA [Anopheles gambiae str. PEST]
 gi|157014901|gb|EAA43860.4| AGAP008300-PA [Anopheles gambiae str. PEST]
          Length = 548

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 42/234 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEM------QWMRQL 65
           C         C YC      DF     S+              +   +      + ++QL
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYHPFLQTRHRVEQLKQL 160

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWT-------------VSSNVEI 108
                       GGT   +        I  + D ++ + +              +  + I
Sbjct: 161 GHSVDKVEFIVMGGTFMCLPEDYRDFFIRNLHDALSGHTSSSVAEAVKYSEKSHTKCIGI 220

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +       G  R+ +GVQS+ E   R   R H       +  ++++  
Sbjct: 221 TIETRPDYCLKRHLSDLLSYGCTRLEIGVQSVYEDVARDTNRGHTVKATCESFQMSKDAG 280

Query: 169 PRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            ++   ++  LP   + +      E      +  D L +Y   + +GT  Y++ 
Sbjct: 281 FKVVSHMMPDLPNVDIERDIEQFIEFFENPDFRADGLKIYPTLVIRGTGLYELW 334


>gi|268678817|ref|YP_003303248.1| hypothetical protein Sdel_0175 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616848|gb|ACZ11213.1| conserved hypothetical protein [Sulfurospirillum deleyianum DSM
           6946]
          Length = 317

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 3/165 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +     K  +    V ++I     S+         +        I  G+QS  + +L
Sbjct: 115 LDTLKALYTKALSFEGVVGLSIGTRTDSISEEVLAYLSELSKTYEIWIEYGIQSSSDATL 174

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R H+++     I L  +   ++   +I+ LP +T       ++ AL   V     +
Sbjct: 175 KRINRGHDSANIAHYIALTHHYNLKICAHVIFGLPDETPQMALESVKFALGLGVHSFKFH 234

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T      K G  +  S+   +        +   + +  
Sbjct: 235 PLYVVERTALANDFKKGHFIPISKESYIQTLVEAIQLLPENVMIQ 279


>gi|95929100|ref|ZP_01311845.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684]
 gi|95135001|gb|EAT16655.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684]
          Length = 305

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 63/179 (35%), Gaps = 6/179 (3%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   + +    + +  + D       V   V + +   P  +  +     ++       
Sbjct: 85  YFQPFSNTYAPVEVLRALYDEALS---VKDVVGLAVGTRPDCLGDDVLDLLQEYHQRTYF 141

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + LGVQS  +++L FL R H+    + A + A+    R+   +I  LP ++  +     
Sbjct: 142 WLELGVQSCHDKTLNFLRRGHDYGCFVDAYNRAKQRGLRVCVHVILGLPGESHKEMMATA 201

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                  VD + ++ L + K T    +++ G   L  +   V              +  
Sbjct: 202 DEMARLKVDGIKVHLLHVLKDTALGDLYEQGAFTLFDQTSYVQTVVDFIERLHPDTMIQ 260


>gi|50119273|ref|YP_048440.1| hypothetical protein ECA0313 [Pectobacterium atrosepticum SCRI1043]
 gi|49609799|emb|CAG73233.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 309

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 81/232 (34%), Gaps = 15/232 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   +S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEQMQQRSIAQQLEAQAGKVNRAKRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           +     +    +  V + +   P  V         +   +R     + LG+QS  +++L 
Sbjct: 97  LESMYQEALKQAEMVGLCVGTRPDCVPDAVLDLLSRYH-DRGYEVWLELGLQSACDKTLH 155

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+ +        AR    ++   LI  LP +   +    L++ +   V+ + L+ 
Sbjct: 156 RINRGHDFACYQETTRRARERGLKVCSHLIVGLPGEDAQRCLTTLEQVVETGVEGIKLHP 215

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           L I +G+   K  + G L   +    V+        T    ++   IS  + 
Sbjct: 216 LHIVEGSTMAKAWRAGRLPELALERYVETAGEMIRHTPPDVIYH-RISASAR 266


>gi|78222914|ref|YP_384661.1| cobalamin B12-binding/radical SAM family protein [Geobacter
           metallireducens GS-15]
 gi|78194169|gb|ABB31936.1| Cobalamin B12-binding/Radical SAM [Geobacter metallireducens GS-15]
          Length = 472

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 90/255 (35%), Gaps = 24/255 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YCD +   R ++     +I      ++ ++ L     I  +FF     +    +
Sbjct: 210 CPYQCSYCDRSVFSRGFRFNSPEYI------VEHLKMLNRDYGIRHVFFYDDLFTTDRAR 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                     +   V+ N    +E     V+    +  +++G  +++ G++S + + ++ 
Sbjct: 264 VARFCELKERERLPVTYNCIARLE----HVDAELLRLLKRSGCWQVNFGIESGDPEVIKK 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             + +   E    + L R+   R+    +  LP +T       +  AL+  +D +++ + 
Sbjct: 320 HRKFYGLDEVQRKLQLVRDTGMRVKGLFMVGLPGETEESIRRTIDYALALPLDEINVTKF 379

Query: 208 TIEKGTLFY---KMHKDGDLVLP---SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           T   G   Y   +   + D   P     N     + +T+            IS       
Sbjct: 380 TPFPGAPLYATIREQGEFDENWPLMNCLNFVFVPHGMTREQLEGLYNEF--ISRFYR--R 435

Query: 262 ESLHNLNYWRYGDYI 276
             +H    W Y   +
Sbjct: 436 SRIH----WGYTKML 446


>gi|281412242|ref|YP_003346321.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|281373345|gb|ADA66907.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 397

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 80/254 (31%), Gaps = 26/254 (10%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC       +    ++      + +  +   + + +   P S 
Sbjct: 138 GIYMPIEITRGCPFSCAYCQTPIIAGKRVRHRDVDVVVHYAKLGVKHGRRLARFIAPNSF 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
                 G TP++ + + +  + +                E  P SV     +  +K   N
Sbjct: 198 GYGSKNGVTPNVEKIEEL--LYELKRVGIEEIYFGTFPSEVRPESVTDEVLKVVKKYVNN 255

Query: 132 R-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R I +G QS  ++ L+ + R H   +   AI            D I+  P +T    E  
Sbjct: 256 RSIVIGAQSGSDRILKIIKRGHTVKQVEEAIEKISLHGFIPHVDFIFGFPFETEEDVEKT 315

Query: 191 LQRALSYAVDH----LSLYQLTIEKGTLFYKM-------HKDGDLVLPSENVAVDLYNLT 239
               +   V+     +  +      GT  +              L   +    +D Y + 
Sbjct: 316 FSFIVKI-VERYGAKIHAHTFMPLPGTELFNAGPGRLTEVHYKFLGRLASKGILDGYWMK 374

Query: 240 QSITSAHGLHAYEI 253
           Q + +      YEI
Sbjct: 375 QEMLA---RKVYEI 385


>gi|197284962|ref|YP_002150834.1| hypothetical protein PMI1091 [Proteus mirabilis HI4320]
 gi|227355364|ref|ZP_03839765.1| radical SAM family protein [Proteus mirabilis ATCC 29906]
 gi|194682449|emb|CAR42355.1| conserved hypothetical protein [Proteus mirabilis HI4320]
 gi|227164588|gb|EEI49459.1| radical SAM family protein [Proteus mirabilis ATCC 29906]
          Length = 309

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 75/192 (39%), Gaps = 12/192 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+    V  +   Q  +  S   ++ +  +          +F   T +  E +++  
Sbjct: 45  CTFCN----VSSFADEQTQY-HSIEEQIAYQAKHITRARRYLAYFQAYTSTYAEVEHLRK 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + +       +   V + +   P  V    ++  QGY + G      LG+Q+   ++L+ 
Sbjct: 100 MYESALLQANM---VGLCVGTRPDCVPVSVLDLLQGYCEQGYEVWLELGLQTAHNKTLKH 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+     A    AR    ++   LI  LP++        L++ +   VD L L+ L
Sbjct: 157 INRGHDFQCYQATTKEARRRGLKVCTHLIIGLPREDHQLNMQTLEQVVETGVDGLKLHPL 216

Query: 208 TIEKGTLFYKMH 219
            I +G+   K  
Sbjct: 217 HIVEGSTIAKAW 228


>gi|253686705|ref|YP_003015895.1| hypothetical protein PC1_0300 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753283|gb|ACT11359.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 309

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   +S   +++              +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEQMQQRSIAQQLETQAGKVNRAKRYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V            + G      LG+QS  +++L  
Sbjct: 97  LESMYQEALKQAEMVGLCVGTRPDCVPDAVLDLLSRYHEQGYEVWLELGLQSACDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR    ++   LI  LP +        L++ +   V+ + L+ L
Sbjct: 157 INRGHDFACYQETTRRARERGLKVCSHLIVGLPGEDAQHCLSTLEQVVETGVEGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I +G+   K  + G L   + +  V+        T    ++   IS  + 
Sbjct: 217 HIVEGSTMAKAWRAGRLPELALDRYVETAGEMIRHTPPEVIYH-RISASAR 266


>gi|297518919|ref|ZP_06937305.1| coproporphyrinogen III oxidase [Escherichia coli OP50]
          Length = 89

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%)

Query: 5  SAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           A+   +       L +YVH PFC K C +C  N  V R +   + ++ + 
Sbjct: 39 QAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDAL 89


>gi|303318853|ref|XP_003069426.1| histone acetyltransferase, ELP3 family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240109112|gb|EER27281.1| histone acetyltransferase, ELP3 family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034580|gb|EFW16524.1| histone acetyltransferase [Coccidioides posadasii str. Silveira]
          Length = 580

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 120/374 (32%), Gaps = 52/374 (13%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 180

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTVSS----------NVEI 108
                       GGT   +           +   L G   N    +           V I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYREEFIAQLHNALSGYQTNNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 241 TIETRPDYCLDTHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAESLHNLNYWRYGDYIGIGP 280
             + N  +D+     ++        Y +     +     G E+  NL     G     G 
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVEN-GNLRELALGRMKDFGT 418

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
                         +  +  P   ++++R++  A    E FL+ E    + L+  LRLR+
Sbjct: 419 TCRDVRTREVGINEVKNKIRPSQ-IELIRRDYVANDGWETFLAYEDPKQDILIGLLRLRK 477

Query: 340 GISVKDWE-MLAGR 352
             +   +   L G+
Sbjct: 478 CSAKYTFRPELTGQ 491


>gi|119181973|ref|XP_001242149.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 580

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 120/374 (32%), Gaps = 52/374 (13%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 180

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAKNWTVSS----------NVEI 108
                       GGT   +           +   L G   N    +           V I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYREEFIAQLHNALSGYQTNNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 241 TIETRPDYCLDTHLSAMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLAKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E     ++  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLFQFQEYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAESLHNLNYWRYGDYIGIGP 280
             + N  +D+     ++        Y +     +     G E+  NL     G     G 
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVEN-GNLRELALGRMKDFGT 418

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
                         +  +  P   ++++R++  A    E FL+ E    + L+  LRLR+
Sbjct: 419 TCRDVRTREVGINEVKNKIRPSQ-IELIRRDYVANDGWETFLAYEDPKQDILIGLLRLRK 477

Query: 340 GISVKDWE-MLAGR 352
             +   +   L G+
Sbjct: 478 CSAKYTFRPELTGQ 491


>gi|257063537|ref|YP_003143209.1| histone acetyltransferase [Slackia heliotrinireducens DSM 20476]
 gi|256791190|gb|ACV21860.1| histone acetyltransferase [Slackia heliotrinireducens DSM 20476]
          Length = 598

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P ++   + +  R+ G  +I +G+QSL+   LR   R  +A++   A  L R
Sbjct: 270 VGLVVETRPDTITPESLRLIRRMGATKIQMGIQSLDGDILRKNLRVSSATDTRHAFELVR 329

Query: 166 NIFPRMSFDLIYALPKQTMTQWEME---LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++   ++  L   +  Q + E     R  +Y  D + LY   +  GT   K + +G
Sbjct: 330 LYGFKIHAHIMVNLYGSSPEQDKHEYLAFTRDEAYKPDEVKLYPCMLVDGTGLKKHYLNG 389

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYE-----ISNHSFLGAESLHNL 267
                S+   +D+  L Q   +             IS H  +      NL
Sbjct: 390 SWAPYSDEELLDV--LVQDTLATPPYTRISRMIRDISAHDIMAGNKHGNL 437


>gi|307717915|ref|YP_003873447.1| radical SAM protein [Spirochaeta thermophila DSM 6192]
 gi|306531640|gb|ADN01174.1| radical SAM protein [Spirochaeta thermophila DSM 6192]
          Length = 318

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 72/213 (33%), Gaps = 19/213 (8%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFG 77
           C  +       C +CD    V   +      ++    +++  +     R   S   ++F 
Sbjct: 36  CPHRDSREGRGCAFCD----VEGSRAPYLGDVRGLEEQVRRAKGFLKARYGASRFLLYFQ 91

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----I 133
             T +    + +  + +           V + +   P  +                   +
Sbjct: 92  AYTNTYGPVEELRRVYEAGLAADEGEW-VGLIVSTRPDCLPDEVLDLLASYKARGLEVWV 150

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+QS  +++LR + R H  ++   A+  A       +  LI  LP +   ++    + 
Sbjct: 151 ELGLQSAFDETLRRIRRGHTVAQWEDAVRRAGEAGLLRAAHLIAGLPGEGREEFWESARF 210

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
                V+ +  + L +  G   ++ +  G+L L
Sbjct: 211 VAESGVEGIKFHDLHLPVGAPLFREYLRGELSL 243


>gi|194856087|ref|XP_001968673.1| GG25004 [Drosophila erecta]
 gi|190660540|gb|EDV57732.1| GG25004 [Drosophila erecta]
          Length = 552

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRSRYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       +  L ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLSYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFQLGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTTCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFLSYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|153802020|ref|ZP_01956606.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122430|gb|EAY41173.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 316

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQKGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|224370295|ref|YP_002604459.1| predicted Fe-S oxidoreductase [Desulfobacterium autotrophicum HRM2]
 gi|223693012|gb|ACN16295.1| predicted Fe-S oxidoreductase [Desulfobacterium autotrophicum HRM2]
          Length = 308

 Score = 77.6 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 29/233 (12%)

Query: 32  CPYCD--------FN---SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C YC+        F+   S  ++ + G++  I+ +   +              ++F   T
Sbjct: 45  CIYCNAKGSGSGLFSQGLSISQQIENGRKAMIRRYKASL------------FLVYFQSYT 92

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGV 137
            +     N+  + D   +  +V   V + I   P  V+            +    +  G+
Sbjct: 93  NTYTSCANMKKMYD---QALSVPGMVGMAIGTRPDCVDPEKLDLIASYTKDYLVWVEYGL 149

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+   +L  + R H+ +    A+ + R    ++   +I  LP +  +      +     
Sbjct: 150 QSIHNSTLERINRGHDFACFERAVTMTRERGVKVCAHVILGLPGEDRSMMLETARALGRL 209

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +D + ++ L + KGT    M    +     +   V+       +     +  
Sbjct: 210 KIDGVKIHLLYVVKGTALETMWTRREYQCLEQQEYVETVCDFIELLPESVIIQ 262


>gi|78224354|ref|YP_386101.1| hypothetical protein Gmet_3163 [Geobacter metallireducens GS-15]
 gi|78195609|gb|ABB33376.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
          Length = 310

 Score = 77.6 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 83/223 (37%), Gaps = 9/223 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C +C        + +  E  + +  L   +++ +  G       +F   + +    + + 
Sbjct: 44  CIFCG-GKGSGSFGIRPELSVTRQLLHGKEFLARRYGAAKF-LAYFQAYSNTYAPVERLR 101

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRF 147
           L+ +   +   VS    + +   P  +                  + LG+QS  +++L  
Sbjct: 102 LLYE---EALAVSDVAGLIVGTRPDCLPSEVLDLLAGYARRTYFWLELGLQSPLDRTLAL 158

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +    A+  +R    R+   +I  LP ++  +     +      V+ + L+QL
Sbjct: 159 INRGHDFAAFADAVVWSRERGIRVCAHVILGLPGESREEMLATAEILNGLGVEGVKLHQL 218

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            + KGT+  +M++ G++     +  VD+            +  
Sbjct: 219 HVMKGTVLEEMYRRGEVRCLERDAYVDIVCDFLERLDPRIVIH 261


>gi|302404972|ref|XP_003000323.1| elongator complex protein [Verticillium albo-atrum VaMs.102]
 gi|261360980|gb|EEY23408.1| elongator complex protein [Verticillium albo-atrum VaMs.102]
          Length = 573

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 80/428 (18%), Positives = 141/428 (32%), Gaps = 83/428 (19%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 114 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 173

Query: 70  -----SISSIFFGGGTPSLIE------PQNIALILDG--IAKNWTVSSNVE--------- 107
                 +  I  GG   + +          IA + +     +   V   VE         
Sbjct: 174 GHSVDKVEYIIMGG---TFMSLAESYREDFIAQLHNALSGYQTSNVDEAVEAGEMSNIKC 230

Query: 108 --ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
             ITIE  P      +     + G  R+ +GVQSL E   R   R H  +        ++
Sbjct: 231 VGITIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCYSK 290

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G
Sbjct: 291 DAGYKVVSHMMPDLPNCGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTG 350

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDY 275
                + N  +DL     ++        Y +     +     G E  +L  L   R  D 
Sbjct: 351 RYQNYTPNELIDLVARIMALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD- 408

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
              G    S   V +  V ++  KH    + +++VR++  A    E FL+ E    + L+
Sbjct: 409 --FG---TSCRDVRTREVGVNEVKHKIRPNQIELVRRDYTANGGWETFLAYEDPKQDILV 463

Query: 333 MGLRLREGISVKDW-EMLAGRNLDIECE---------------RNLQRQGF--IERVQFS 374
             LRLR+      + E L G+   +  E               +  Q QGF  +   +  
Sbjct: 464 ALLRLRKCSDKYTFREELVGQPTSLVRELHVYGTAVPVHARDPKKFQHQGFGTLLMEEAE 523

Query: 375 RLRCTQRG 382
           R+   + G
Sbjct: 524 RIARDEHG 531


>gi|260596160|ref|YP_003208731.1| hypothetical protein CTU_03680 [Cronobacter turicensis z3032]
 gi|260215337|emb|CBA27318.1| Uncharacterized protein yhcC [Cronobacter turicensis z3032]
          Length = 311

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 89/234 (38%), Gaps = 19/234 (8%)

Query: 32  CPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C +C+  S     +  +  +  +      +   R+          +F   T +      +
Sbjct: 45  CTFCNVASFADETQQHLPIQQQLAQQAARVDRARRYLA-------YFQAYTSTF---AEV 94

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSL 145
            ++ +   +  + +  V + +   P  V     +   GY + G      LG+QS ++++L
Sbjct: 95  NVLREMYQQAISQADIVGLCVGTRPDCVPESVLDLLSGYHQQGYEVWLELGLQSAKDKTL 154

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+ +        AR    ++   LI  LP +T     + L+R +   VD + L+
Sbjct: 155 HRINRGHDFACYQDTARRARARGLKVCTHLIVGLPGETRLDALVSLERVVETGVDGIKLH 214

Query: 206 QLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            L I +G++  K  + G L  +  E+ AV    + +        H   IS  + 
Sbjct: 215 PLHIVEGSIMAKAWRAGRLSGIALEDYAVTAGEMIRHTPPDIIYHR--ISASAR 266


>gi|23014689|ref|ZP_00054493.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 486

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 61/198 (30%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC YC        +   +  F+ +   L +M +         +  ++F   T +   
Sbjct: 217 CPAKCSYC----TAPFFHGTRTRFMSAGKVLDDMAYYLNQG----MREVYFRDETFT--- 265

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +   ++D        +        A   +V+        +AG + I  G +S  +  L
Sbjct: 266 -ADRQRVMDICTGIIERNLRFSWICNARVDTVDPEMLGLMHRAGCHLIKFGAESGSQTVL 324

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +     +   A               +  +P +T+   E  L  A+  A    +  
Sbjct: 325 DAVKKGITLQQTRDAFRWCSEAGIATHAHFMVGMPGETLETMEATLDLAIEIAPSTATFG 384

Query: 206 QLTIEKGTLFYKMHKDGD 223
             T   GT  ++     D
Sbjct: 385 ICTPYPGTPLFRDVARLD 402


>gi|46110316|ref|XP_382216.1| hypothetical protein FG02040.1 [Gibberella zeae PH-1]
          Length = 572

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 119/362 (32%), Gaps = 55/362 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 116 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 175

Query: 72  SSI------FFGGGTPSLIEP----QNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + IA + +     +   V   VE           I
Sbjct: 176 GHSVDKVEYIIMGGTFMSLSESYREEFIAQLHNALSGYQTTNVDEAVEAGEMSNVKCVGI 235

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 236 TIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDSNRGHTVAAVAETFCLAKDAG 295

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 296 YKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 355

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +DL     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 356 NYTPNGLIDLVARIMALIPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 411

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               I  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 412 GTTCRDVRTREVGVNEIKNKIRPNQ-IELVRRDYVANGGWETFLAYEDPKQDILVALLRL 470

Query: 338 RE 339
           R+
Sbjct: 471 RK 472


>gi|153216222|ref|ZP_01950326.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153828817|ref|ZP_01981484.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|124114409|gb|EAY33229.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|148875693|gb|EDL73828.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 316

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|253743952|gb|EET00225.1| Histone acetyltransferase Elp3 [Giardia intestinalis ATCC 50581]
          Length = 579

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 87/266 (32%), Gaps = 47/266 (17%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQLTGP-RSISSI 74
           C YC      DF    + Y   +   +++              M+ +RQL      I  +
Sbjct: 100 CTYCGGGPDSDFAYSTQSYTGFEPTSMRAIRARYDPTEQVRVRMEQLRQLGHTTNKIEVV 159

Query: 75  FFGGGTPSLIE------PQNIALILDGIAKNWTVSSN------------------VEITI 110
             GG   + +          I+ I  G+  +                        V +TI
Sbjct: 160 LMGG---TFLSTPRSYRDSFISGIYTGLTGHIPAGPKRNIVPESISYAARSSIKCVALTI 216

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           E  P   E  +     + G  R+ +GVQS+ +     + R H     I     +++   +
Sbjct: 217 ETRPDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQSKDAGFK 276

Query: 171 MSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           M   ++  LP  +  +      EL ++ +Y  D L +Y   I +GT  Y+  +    +  
Sbjct: 277 MIAHMMPNLPFTSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYERWRLNKYLRN 336

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEI 253
                +        I +   +  Y I
Sbjct: 337 LPTHKLIHLLTMIYIMAPPWVRIYRI 362


>gi|126699017|ref|YP_001087914.1| putative radical SAM superfamily protein [Clostridium difficile
           630]
 gi|115250454|emb|CAJ68277.1| putative oxidoreductase, Fe-S subunit [Clostridium difficile]
          Length = 311

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 51  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   + ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 104 ---LEVLKEKYETILELEDVIGLSISTRPDCLPDDIVEYLSELNKRTNLWVELGLQTIHD 160

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 161 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGI 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 221 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 268


>gi|327188611|gb|EGE55821.1| oxygen-independent coprophorphyrinogen III oxidase protein
           [Rhizobium etli CNPAF512]
          Length = 63

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392
           MGLRLREG+ +  W+ L+GR LD + E  L    FIER+  SRLRCT  GM +LDSV+A+
Sbjct: 1   MGLRLREGVDLARWQQLSGRELDPKREEFLLEHKFIERIGNSRLRCTPSGMLILDSVVAD 60

Query: 393 LA 394
           LA
Sbjct: 61  LA 62


>gi|325677834|ref|ZP_08157476.1| radical SAM protein, TIGR01212 family [Ruminococcus albus 8]
 gi|324110388|gb|EGC04562.1| radical SAM protein, TIGR01212 family [Ruminococcus albus 8]
          Length = 314

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 79/218 (36%), Gaps = 7/218 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        +    ++ I++   E++ + +          +F  G+ +     ++  
Sbjct: 51  CKFCS-AKLSGNFAGDPKDTIEAQYAEVRAVMEKKWRNGSCIPYFQAGSSTY---ADVGY 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +      ++ + V ++I      ++        G  K     + LG+Q++ +++   +
Sbjct: 107 LREMFTAAMSLENAVGLSIATRADCIDREKAAMLGGLAKQTYLTVELGLQTVYDETALAM 166

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +    L R     +   LI  LP ++        ++     +  + L+ L 
Sbjct: 167 NRCHTYADFLRGYELLRENGVNVCVHLIDGLPNESREMMLQSARQVGQLDIHAVKLHLLH 226

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           + KGT    M+  G+      +  + L      +   H
Sbjct: 227 VLKGTALADMYARGEFRALERDEYISLICDQLELLPPH 264


>gi|229528637|ref|ZP_04418027.1| hypothetical protein VCG_001723 [Vibrio cholerae 12129(1)]
 gi|229332411|gb|EEN97897.1| hypothetical protein VCG_001723 [Vibrio cholerae 12129(1)]
          Length = 316

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKRYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|229514006|ref|ZP_04403468.1| hypothetical protein VCB_001651 [Vibrio cholerae TMA 21]
 gi|229349187|gb|EEO14144.1| hypothetical protein VCB_001651 [Vibrio cholerae TMA 21]
          Length = 316

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 86/243 (35%), Gaps = 21/243 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D + L+ L I +G+   K  + G L +  ++  V +       T    ++   +S+
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDEYVSIACEIIRSTPPEIVYH-RVSS 267

Query: 256 HSF 258
            + 
Sbjct: 268 AAR 270


>gi|167375949|ref|XP_001733791.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165904966|gb|EDR30088.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 576

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 82/244 (33%), Gaps = 46/244 (18%)

Query: 32  CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C YC      DF            + +R  +     +IQS     Q  +       +  I
Sbjct: 116 CVYCPGGCDSDFEYSTQSYTGYEPTSMRAVRARYNPYIQSRSRVEQLQKLGHSVEKVEYI 175

Query: 75  FFGGGTPSLIEPQNIAL------ILDGIAKNWTVSSNVE---------------ITIEAN 113
             GG   + +             + D ++ +  VSS VE               +TIE  
Sbjct: 176 IMGG---TFLSMDKHYRDSFILGLFDALSGH--VSSTVEEAVHYGENSKVKCVALTIETR 230

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           P     ++ +   + G  R+ +G+QS+ E   +   R H   + I      ++   ++  
Sbjct: 231 PDCCSEDHIREMFRYGTTRLEIGLQSIFEDICKECNRGHTVRDCIGCYKRLKDAGYKIVT 290

Query: 174 DLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
            ++  LP     +         S   Y  D L LY   + +GT  Y+M + G     +  
Sbjct: 291 HMMPNLPGVPPERDVFTYSEMFSDGAYQCDGLKLYPCLVIRGTRLYEMWRKGHYHSYTSE 350

Query: 231 VAVD 234
             +D
Sbjct: 351 ETID 354


>gi|88602423|ref|YP_502601.1| ELP3 family histone acetyltransferase [Methanospirillum hungatei
           JF-1]
 gi|88187885|gb|ABD40882.1| histone acetyltransferase, ELP3 family [Methanospirillum hungatei
           JF-1]
          Length = 522

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 5/151 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V IT E  P      +       GV ++ LGVQ L+++ L    R    ++ + A    
Sbjct: 200 CVAITFETRPDWCRKEHIDRMLDLGVTKVELGVQHLDDEILTLNLRGCTVADTVEANTFL 259

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP  T         +L     +  D L +Y   +  G+   ++++ 
Sbjct: 260 RDAGLKVGFHMMPNLPGSTFASDRQMFHDLFADPRFRPDFLKIYPCLVTPGSKIEELYES 319

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           G      E+  +DL  +  +          +
Sbjct: 320 GAYAPYDEDDLIDL--VADAKMEIAPYCRLQ 348


>gi|159117819|ref|XP_001709129.1| Histone acetyltransferase Elp3 [Giardia lamblia ATCC 50803]
 gi|157437244|gb|EDO81455.1| Histone acetyltransferase Elp3 [Giardia lamblia ATCC 50803]
          Length = 588

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 3/152 (1%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +TIE  P   E  +     + G  R+ +GVQS+ +     + R H     I     +
Sbjct: 220 CVALTIETRPDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQS 279

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   +M   ++  LP  +  +      EL ++ +Y  D L +Y   I +GT  Y+  + 
Sbjct: 280 KDAGFKMIAHMMPNLPFTSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYERWRL 339

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +       +        + +   +  Y I
Sbjct: 340 NKYLRNLPTHKLIYLLTIIYVLAPPWVRIYRI 371


>gi|221194678|ref|ZP_03567735.1| elongator complex protein 3 [Atopobium rimae ATCC 49626]
 gi|221185582|gb|EEE17972.1| elongator complex protein 3 [Atopobium rimae ATCC 49626]
          Length = 617

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 64/147 (43%), Gaps = 4/147 (2%)

Query: 89  IALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              +L+   +N T +  V  + IE  P ++  +N + +R+ G  +I +G+QS  ++ L  
Sbjct: 264 FDDLLEQQHRNETAACRVVGLVIETRPDTITPDNLRMFRQLGCTKIQIGIQSTRQEILDA 323

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSL 204
             R    ++   A  L R    ++   L+  L   T  + + +    ++   +  D + L
Sbjct: 324 NLRRMTVAQIKRAFSLIRLYGFKIHSHLMVNLLGATPEEDKCDFNNFVTDPGFLPDEIKL 383

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
           Y   +  GT   K +++G     S++ 
Sbjct: 384 YPCALVAGTQLVKAYREGLWRPYSKDE 410


>gi|254226156|ref|ZP_04919752.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621324|gb|EAZ49662.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 316

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFAN-----EETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|313759750|gb|ADR79187.1| coproporphyrinogen III oxidase [Chlamydophila psittaci]
          Length = 144

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 2/129 (1%)

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEME 190
           R+SLGVQ  +      + R  +  E++ A    R   F  ++ DLIY LPKQT   +   
Sbjct: 1   RVSLGVQDTQAAVQEAVRRRQSHEESLYAYEKFRELGFESINIDLIYGLPKQTKLTFTQT 60

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   L    + L+L+        +        +  +PS      +Y+  +   +  G  A
Sbjct: 61  IADILHMRPNRLALFSFASVP-WIKPHQKAMKESDMPSMEEKFAIYSYARHTLTKAGYQA 119

Query: 251 YEISNHSFL 259
             + + S  
Sbjct: 120 IGLDHFSLP 128


>gi|156379464|ref|XP_001631477.1| predicted protein [Nematostella vectensis]
 gi|156218518|gb|EDO39414.1| predicted protein [Nematostella vectensis]
          Length = 549

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 119/366 (32%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTKHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   ++       I  + D ++ +              + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMCLDEGYRDFFIRNLHDALSGHTSNNVEEAVKYSERSKTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H +++ 
Sbjct: 220 ITIETRPDYCLKKHLSSMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHQSKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GFKVVSHMMPDLPNVGLERDIDQFIEFFENPAFRADGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                N  V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPNTLV---DLIARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++ +R++  A    E FLS E    + L+ 
Sbjct: 397 -----GTQCRDVRTREVGIQEIHHKVRPFEIEQIRRDYVANGGWETFLSYEDPEQDILIG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|327484872|gb|AEA79279.1| Predicted Fe-S oxidoreductase [Vibrio cholerae LMA3894-4]
          Length = 312

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKRYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 88  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 145 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 205 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 260


>gi|226329850|ref|ZP_03805368.1| hypothetical protein PROPEN_03762 [Proteus penneri ATCC 35198]
 gi|225200645|gb|EEG82999.1| hypothetical protein PROPEN_03762 [Proteus penneri ATCC 35198]
          Length = 297

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 74/192 (38%), Gaps = 12/192 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+    V  +   Q  +  S   ++    +          +F   T +  E + +  
Sbjct: 45  CTFCN----VSSFADEQTQY-HSIEEQIALQAKNINRAHRYLAYFQAYTSTYAEVEYLRT 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           + +       +   V + +   P  V    ++  QGYR  G      LG+Q+  +++L++
Sbjct: 100 LYETALLQADM---VGLCVGTRPDCVPISVLDLLQGYRDQGYEVWLELGLQTAHDKTLKY 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+     A    AR    ++   LI  LP++        L+R +    D L L+ L
Sbjct: 157 INRGHDFQCYQATTREARQRGLKVCTHLIVGLPREDHLLNMQTLERVVETGTDGLKLHPL 216

Query: 208 TIEKGTLFYKMH 219
            I +G+   K  
Sbjct: 217 HIVEGSTIAKAW 228


>gi|239835361|ref|YP_002956033.1| cobalamin vitamin B12-binding domain/radical SAM domain protein
           [Desulfovibrio magneticus RS-1]
 gi|239794452|dbj|BAH73443.1| cobalamin vitamin B12-binding domain/radical SAM domain protein
           [Desulfovibrio magneticus RS-1]
          Length = 501

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 76/200 (38%), Gaps = 8/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C  N+   R  + +     S L E+ W+    G R+I  +         +   
Sbjct: 225 CPYHCTFCCINALFGRPGL-RTRSTASVLQEIDWLVSTHGVRNIKILDE-------MFAI 276

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +++          ++ I   A  ++V     +  ++AGVN ++ G ++   + L  
Sbjct: 277 NEKRVVELCDAIAERGYDLNIWAYARVNTVTPPMIESMKRAGVNWLAYGFETASRRVLAA 336

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             + ++ ++  A + L R     +  + I+ LP+      +  L R      +  ++Y  
Sbjct: 337 NAKGYDPAKVDAVVDLTRRAGIYICANFIFGLPEDDYDSMQETLARMQEINAEWANIYSA 396

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
               G+  Y+     D  LP
Sbjct: 397 MAFPGSKLYEQALAKDWPLP 416


>gi|188995048|ref|YP_001929300.1| hypothetical protein PGN_1184 [Porphyromonas gingivalis ATCC 33277]
 gi|188594728|dbj|BAG33703.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 310

 Score = 77.3 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 9/219 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    + +   +  +     + +  +   P +    +F   T +  E   I  
Sbjct: 47  CTYCNNQTFSPAFAMKDRSVSEQLRDGIAFFARKY-PHTKYLAYFQAYTNTYGEQAEIIR 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
             +     + V   V I I   P  +  +     +         +  GV+S  + +LR +
Sbjct: 106 KYEEALNYYDV---VGIIIGTRPDCMPDSLLSYLKDLSERVFVLVEYGVESTLDATLRRV 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  S+++AAI         +   LI  LP ++         +  +  V  L L+QL 
Sbjct: 163 NRGHLWSDSMAAIERTAKTGLPIGVHLILGLPGESREDILRHADKISALPVTTLKLHQLQ 222

Query: 209 IEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITSA 245
           I +GT   K +     D    SE   +DL          
Sbjct: 223 IIRGTAMAKEYAESPSDFHFYSEEEYIDLCLDFIERLRP 261


>gi|315187517|gb|EFU21273.1| conserved hypothetical protein [Spirochaeta thermophila DSM 6578]
          Length = 317

 Score = 77.3 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 71/213 (33%), Gaps = 19/213 (8%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFG 77
           C  +       C +CD    V   +      ++    +++  +     R   S   ++F 
Sbjct: 35  CPHRDSREGRGCAFCD----VEGSRAPYLGDVRGLEEQVRRAKGFLKARYGASRFLLYFQ 90

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----I 133
             T +    + +  + +           V + +   P  +                   +
Sbjct: 91  AYTNTYGPVEELRRVYEAGLAAGEGEW-VGLIVSTRPDYLPDEVLDLLASYKARGLEVWV 149

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+QS  +++LR + R H  ++   A+  A       +  LI  LP +    +    + 
Sbjct: 150 ELGLQSAFDETLRRIRRGHTVAQWEDAVRRAGEAGLLRAAHLIAGLPGEGREAFWESARF 209

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
                V+ +  + L +  G   ++ +  G+L L
Sbjct: 210 VAESGVEGIKFHDLHLPVGAPLFQEYLRGELSL 242


>gi|310790372|gb|EFQ25905.1| ELP3 family histone acetyltransferase [Glomerella graminicola
           M1.001]
          Length = 575

 Score = 77.3 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 79/425 (18%), Positives = 135/425 (31%), Gaps = 77/425 (18%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 116 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 175

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDG--IAKNWTVSSNVE-----------I 108
                 +  I  GG     P       IA + +     +   V   VE           I
Sbjct: 176 GHSVDKVEYIIMGGTFMSLPVSYREDFIAQLHNALSGYQTSNVDEAVEASEMSNIKCVGI 235

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 236 TIETRPDYCWQPHLTDMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 295

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 296 FKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 355

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 356 NYTPNGLI---DLVARILALIPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 410

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   +++VR++  A    E FL+ E    + L+  L
Sbjct: 411 -FGTTCRDVRTREVGVNEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILVALL 468

Query: 336 RLREGISVKDW-EMLAGRNLDIECE---------------RNLQRQGF--IERVQFSRLR 377
           RLR+      + E L G+   +  E               +  Q QGF  +   +  R+ 
Sbjct: 469 RLRKCTEKYTYREELVGQPTSLVRELHVYGTAVPVHARDPKKFQHQGFGTLLMEEAERIA 528

Query: 378 CTQRG 382
             + G
Sbjct: 529 RDEHG 533


>gi|153825912|ref|ZP_01978579.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149740410|gb|EDM54541.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 316

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 83/236 (35%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        +E   QS   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFA-----DEETQQQSIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 RVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|195388168|ref|XP_002052755.1| GJ20018 [Drosophila virilis]
 gi|194149212|gb|EDW64910.1| GJ20018 [Drosophila virilis]
          Length = 556

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 117/366 (31%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + F+Q+     + ++Q
Sbjct: 101 CPHINFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFLQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +  +     I  + D                   + +  + 
Sbjct: 160 LGHSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHSSANVAEAVRYSEKSRTKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H         ++ ++ 
Sbjct: 220 ITIETRPDYCLKRHISDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCETFNMGKDA 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP     +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 280 GYKIVTHMMPDLPNVDFERDIEQFIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
                ++ V   +L   I +        Y +          S +   +L  L   R  D 
Sbjct: 340 KSYPPSMLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                G   R           I      + ++++R++  A    E F+S E    + L+ 
Sbjct: 397 -----GTVCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFISYEDPEQDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|19115774|ref|NP_594862.1| elongator complex, histone acetyltransferase subunit Elp3
           (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74626625|sp|O14023|ELP3_SCHPO RecName: Full=Probable elongator complex protein 3
 gi|2239229|emb|CAB10146.1| elongator complex, histone acetyltransferase subunit Elp3
           (predicted) [Schizosaccharomyces pombe]
          Length = 544

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 122/365 (33%), Gaps = 61/365 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ +R 
Sbjct: 96  CPHIAMTGNVCVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLRS 154

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIA------------KNWTVSSNVE----- 107
           L            GGT   +        +  +             +    S   E     
Sbjct: 155 LGHTVDKVEYIIMGGTFMSLPESYRHTFIANLHNALSGATTEDLDEAVKFSEQSETKCVG 214

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H          LA++ 
Sbjct: 215 ITIETRPDYCLDQHLDEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFQLAKDT 274

Query: 168 FPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   M +      E     ++  D L LY   + +GT  Y++ K G  
Sbjct: 275 GYKVVTHMMPDLPNVGMERDIFQFQEYFENPAFRTDGLKLYPTLVIRGTGLYELWKTGRY 334

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDY 275
              + N  V   +L   I +        Y I     +   S       L  L   R  D 
Sbjct: 335 KNYTPNALV---DLIARILALVPPWTRIYRIQRDIPMPLVSSGVETGNLRELALNRMRD- 390

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
           +G         +VG   V   I  HPE  ++++R++  A    E FLS E    + L+  
Sbjct: 391 LGTKCRDIRAREVGMQEVHHKI--HPEQ-VELLRRDYTANGGWETFLSYEDPKQDILIGL 447

Query: 335 LRLRE 339
           LRLR+
Sbjct: 448 LRLRQ 452


>gi|10956071|ref|NP_053055.1| hypothetical protein pSR1_p1 [Selenomonas ruminantium]
 gi|5739175|gb|AAD50370.1| unknown [Selenomonas ruminantium]
          Length = 324

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRK----AGVN-RISLGVQSLEEQSLRFLGRNHNASEA 157
              V + I   P  V   +    ++     G++  + LG+QS    +L  + R H  +E 
Sbjct: 115 EDVVAVYIATRPDCVSDEHLAVLKEQADKYGIDICVELGLQSTNVHTLTAINRGHTLAEL 174

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           I AI   +    +    LI  LP         + +   +  VD + L+ L I KGT   +
Sbjct: 175 IDAILRIKRYGLQSCVHLILNLPWDDELDVIEDAKILSALGVDQVKLHALYIVKGTAMAR 234

Query: 218 MHKDGDLVL 226
            +++G L +
Sbjct: 235 DYEEGKLKM 243


>gi|329962410|ref|ZP_08300410.1| radical SAM protein family [Bacteroides fluxus YIT 12057]
 gi|328529966|gb|EGF56854.1| radical SAM protein family [Bacteroides fluxus YIT 12057]
          Length = 310

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 13/221 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKTVTQQLEEGKLFFARKYPEMKYLAYFQAYTNTY---GELES 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           +     +  +V   V + I   P  +     +     G+NR     +  G++S  +++L+
Sbjct: 103 LKRKYEEALSVDGVVGLVIGTRPDCMPDELLRYL--EGINRQTFLLVEYGIESTRDETLK 160

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H     + A+             +I  LP +T      +        V  L ++Q
Sbjct: 161 RINRGHTFQATVDAVERTAACGILTGGHVILGLPGETHESIVAQAATLSRLPVTTLKMHQ 220

Query: 207 LTIEKGTLFYKMHKDG--DLVLPSENVAVDLYNLTQSITSA 245
           L + +GT     ++    D  L   +  ++L          
Sbjct: 221 LQLIRGTRMALEYEQHPQDFHLFQVDEYIELVIDYIEHLRP 261


>gi|257784709|ref|YP_003179926.1| Histone acetyltransferase [Atopobium parvulum DSM 20469]
 gi|257473216|gb|ACV51335.1| Histone acetyltransferase [Atopobium parvulum DSM 20469]
          Length = 617

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 62/147 (42%), Gaps = 4/147 (2%)

Query: 89  IALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              +++    N T ++ V  + IE  P ++   N + +R+ G  +I +G+QS  ++ L  
Sbjct: 264 YDELVEQQRVNETAAARVVGLVIETRPDTITPGNLRMFRQLGCTKIQIGIQSTRQEILDA 323

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSL 204
             R  + ++   A  L R    ++   L+  L   T    + + +  ++   +  D + L
Sbjct: 324 NKRQMSVAQIKRAFSLIRLYGFKIHSHLMVNLLGATPEADKQDFKTFVTDPGFLPDEIKL 383

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
           Y   +  GT   +   +G     +++ 
Sbjct: 384 YPCALVSGTQLVQKFHEGTWQPYTKDA 410


>gi|210612735|ref|ZP_03289450.1| hypothetical protein CLONEX_01652 [Clostridium nexile DSM 1787]
 gi|210151428|gb|EEA82436.1| hypothetical protein CLONEX_01652 [Clostridium nexile DSM 1787]
          Length = 315

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 76/219 (34%), Gaps = 15/219 (6%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMR---QLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S V        + + S   +++  +   +          +F   T + ++      
Sbjct: 42  CSFCSEVGTGFEALASQV-SVTEQLERTKILIEKKYKAKKYIAYFQNYTNTFMKLDVFQA 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSLEEQSLR 146
            +   A    +   VEI+I   P  ++       +           I LG+Q++   +L 
Sbjct: 101 YICEAAACLDI---VEISISTRPDCIQKEYLDVLKSISEKYQVAISIELGLQTVNYHTLD 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H  +E I A+ + ++    +   +I  LP  +M       +   +  +D + ++ 
Sbjct: 158 TINRGHGLAEYIDAVLMIQSYAFPICTHIILNLPGDSMRDAIESAKILSALKIDIVKIHS 217

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L I K T     ++ G + + S+           +    
Sbjct: 218 LYIAKNTKLSYEYESGTIKICSKEE---YIQRLIAFLEH 253


>gi|328713209|ref|XP_001947006.2| PREDICTED: elongator complex protein 3-like isoform 1
           [Acyrthosiphon pisum]
 gi|328713211|ref|XP_003245018.1| PREDICTED: elongator complex protein 3-like isoform 2
           [Acyrthosiphon pisum]
          Length = 547

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 121/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+     + ++Q
Sbjct: 101 CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRAHYNPYVQTRHRV-EQLKQ 159

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVS-------------SNVE 107
           L            GGT   +        I  + D ++ + + +               + 
Sbjct: 160 LGHNVDKVEFIVMGGTFMSLPEDYRDYFIRNLHDALSGHTSSNVREAVKYSERSNVKCIG 219

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +       G  R+ +GVQS+ E   R   R H         +LA++ 
Sbjct: 220 ITIETRPDYCLNRHLTDMLNYGCTRLEIGVQSVFEDVARDTNRGHTVKAVCETFNLAKDC 279

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   + +       + VD L +Y   + +GT  Y++ + G  
Sbjct: 280 GFKIVSHMMPDLPNVDLERDLQQFKEFFENPAFRVDGLKIYPTLVMRGTGLYELWRSGRY 339

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDY 275
              S +  V   +L   I S        Y +          S +   +L  L   R  D 
Sbjct: 340 RSYSPSELV---DLIAHILSLIPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALARMKDL 396

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
                    R           I      + ++++R++  A    E FLS E    + L+ 
Sbjct: 397 -----NLQCRDVRTREVGIQEIHNKIRPFEIELIRRDYVANNGWETFLSYEDPEQDILIG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|317498475|ref|ZP_07956769.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894168|gb|EFV16356.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 313

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 24/219 (10%)

Query: 28  CVKK-----CPYCD-----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +     C +C      F       +V     + +   ++   ++    + I+  +F 
Sbjct: 30  CPNRMDGDGCTFCGGVGTGF--EAMNSEVSVSEQLNATKGKI--TKRYKAKKFIA--YFQ 83

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----- 132
             T + +        L   A+   +   V I++   P  +        +K          
Sbjct: 84  NYTNTFLPVDKFEKYLVEAAQTEDI---VGISVSTRPDCITKEYLDCLKKISEEYQVKIS 140

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+Q++  ++L  + R H  +E + A+ +       +   +I  LP   MT      +
Sbjct: 141 MEYGLQTVNYKTLNKIDRGHTLAEYLDAVLMTAPYGFEICTHIILNLPGDDMTDVIETAK 200

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              +  V  + L+ L I KG+  Y+ +K+G + L     
Sbjct: 201 ILSALPVQIVKLHSLYIPKGSKMYEEYKEGKITLCDPEE 239


>gi|225620743|ref|YP_002722001.1| Fe-S oxidoreductase [Brachyspira hyodysenteriae WA1]
 gi|197342810|gb|ACH69316.1| putative bacterial Fe-S oxidoreductase [Brachyspira hyodysenteriae
           WA1]
 gi|225215563|gb|ACN84297.1| Fe-S oxidoreductase [Brachyspira hyodysenteriae WA1]
          Length = 323

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 30/241 (12%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  K     C +C+ NS+  +     E  I +    +  ++   G       +F  GTP 
Sbjct: 39  CAHKVNEGGCRFCNLNSY--KPPYVTEEDINN--QWINGLKNYKGRYQKFYGYFQLGTP- 93

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGV 137
            + P      L    K       V +   A    +E    +              + +G+
Sbjct: 94  -LSPLASKESLKYANKLVHFDECVGLMFGARSDMLEDEVLKELSDLSELLGKEIWLEMGL 152

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI--HLARNIFPRMSFDLIYALPK------------QT 183
           QS  +++ +F+ R H+       +           +   +I+ LPK            ++
Sbjct: 153 QSSNDETSKFINRGHDYKSFAETVNHIKNNYNNIIICTHIIFGLPKKFNDNDKKTIELES 212

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++   +  +D +  +QL I KG+ F  M+KD +     E+  +DL +   S T
Sbjct: 213 RDDMIKTVKDISTLKIDAVKFHQLDIVKGSYFENMYKDCEFPTLDEDFYIDLMSDAISFT 272

Query: 244 S 244
            
Sbjct: 273 R 273


>gi|328769009|gb|EGF79054.1| hypothetical protein BATDEDRAFT_90184 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 555

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/271 (20%), Positives = 97/271 (35%), Gaps = 25/271 (9%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           S +    +A   +           + ITIE  P      +     + G  R+ +GVQS+ 
Sbjct: 204 SFLNVNTLARFSEQSQTKC-----IGITIETRPDYCLKPHLSQMLRYGCTRLEIGVQSVY 258

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YA 198
           E   R   R H          LA++   ++   ++  LP   M +   + +       + 
Sbjct: 259 EDVARDTNRGHTVKAVCETFQLAKDTGYKVVVHMMPDLPNVGMERDLEQFKEYFENPAFR 318

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH 256
            D L LY   + +GT  Y++ + G     +    V   NL   I +        Y +   
Sbjct: 319 SDGLKLYPTLVIRGTGLYELWRTGRYKNYAPQALV---NLIAKILAMVPPWTRVYRVQRD 375

Query: 257 -------SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVR 309
                  S +   +L  L   R  D +G         +VG   +   +       ++++R
Sbjct: 376 IPMPLVTSGVEYGNLRELALSRMKD-LGTECRDVRTREVGIQDIHNKVRPDQ---VELIR 431

Query: 310 KNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
           ++  A    E FLS E    + L+  LRLR+
Sbjct: 432 RDYVANGGWETFLSYEDPEQDILIGLLRLRK 462


>gi|306519967|ref|ZP_07406314.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-32g58]
          Length = 291

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 51  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   + ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 104 ---LEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 160

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 161 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGI 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 221 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 268


>gi|293374331|ref|ZP_06620658.1| radical SAM protein, TIGR01212 family [Turicibacter sanguinis
           PC909]
 gi|325841263|ref|ZP_08167364.1| radical SAM protein, TIGR01212 family [Turicibacter sp. HGF1]
 gi|292646994|gb|EFF64977.1| radical SAM protein, TIGR01212 family [Turicibacter sanguinis
           PC909]
 gi|325489944|gb|EGC92291.1| radical SAM protein, TIGR01212 family [Turicibacter sp. HGF1]
          Length = 317

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 80/222 (36%), Gaps = 6/222 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        +    E+ +++    ++ M     P +    +F   T +    + +  
Sbjct: 52  CTFCS-TKGSGDFAGKPEDDLKTQFNSVREMMHQKWPEAGYIAYFQAFTNTHAPVEVLKR 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + +     + V ++I   P  +  +  +   +        + LG+Q++ +Q+ + +
Sbjct: 111 KYEAVLECDP--NIVGLSIGTRPDCLPDDVVEYLGELNQRVNLWVELGLQTMHDQTGKLI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  +   R     +   +I  LP +T        +      V  + ++ L 
Sbjct: 169 NRGHDFKTLVEGVEKLRKHNIDVIIHIINGLPGETREMMLETAKAVAKLDVQGIKIHLLH 228

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  GT  +KM   G L L  ++  +DL      I     +  
Sbjct: 229 VIDGTPMHKMLDKGMLQLMDKDEYIDLVVDQLEILPPEMVIH 270


>gi|220932036|ref|YP_002508944.1| radical SAM protein, TIGR01212 family [Halothermothrix orenii H
           168]
 gi|219993346|gb|ACL69949.1| radical SAM protein, TIGR01212 family [Halothermothrix orenii H
           168]
          Length = 318

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 21/231 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSF--LTEMQWMRQLTGPR---SISSIFFGGGTPSLIEP 86
           C +C           G EN+  S     +++  +   G +        +F   + + +  
Sbjct: 42  CSFCG------EMGAGFENYPASMSVKEQLEKNKTYIGNKYGAEKFIAYFQNFSNTYLPV 95

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-------SLGVQS 139
           + +   L+   +   +++   I +   P  +     +  ++    ++        LG+Q+
Sbjct: 96  EKLLKYLEEATEVNDIAA---IILSTRPDCINNVYLKKIKEKMEKKVPEINLGLELGLQT 152

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +   +L  + R H   E I AI  A+     +   LI  LP   M       +   +  V
Sbjct: 153 VNYHTLTRVNRGHTLGEVIDAILNAQKYNFEIGIHLILNLPGDNMVDVIENAKIISALKV 212

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D++ L+ L I +GT F + +K G+  +      V+                
Sbjct: 213 DNVKLHALYIREGTEFAEKYKKGEFDIIPLEEYVERVITFLEYLDPQIAIQ 263


>gi|283788147|ref|YP_003368012.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
 gi|282951601|emb|CBG91301.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
          Length = 305

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 16/231 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++     L         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRI-SLGVQSLEEQSLRF 147
           +     +  + +S V + +   P  V           +  G      LG+Q+  +++L  
Sbjct: 97  LRAMYQQAVSQASIVGLCVGTRPDCVPEAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +       LAR    ++   LI  LP +  ++    L+R +   VD + L+  
Sbjct: 157 INRGHDFACYQRTTRLARERGLKVCSHLIVGLPGEGQSECLQTLERVVETGVDGIKLH-- 214

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            I KG++  K  + G L   + +            T    ++   IS  + 
Sbjct: 215 -IVKGSIMAKAWEAGRLNGIALDEYTVAAGEMIRHTPPEVIYH-RISASAR 263


>gi|237751127|ref|ZP_04581607.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229373572|gb|EEO23963.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 337

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 4/143 (2%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQSLRF 147
           +     K   +   V ++I      V+           +      +  G+QS+ E++L+ 
Sbjct: 137 LKALYTKALKLPDVVGMSIGTRVDCVDSKLLDFLGEFVKGGKEIWLEYGIQSIYEETLKL 196

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R H      +     R    ++   LIY LP +++      LQ  LSY VD L ++ L
Sbjct: 197 TNRGHTMEGVESLFKETRKRGIKVCAHLIYGLPNESVDMMIHSLQTILSYGVDSLKIHPL 256

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            + +GT   +M+K G+    S  
Sbjct: 257 YVVEGTALARMYKKGEYTPISLE 279


>gi|78222094|ref|YP_383841.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15]
 gi|78193349|gb|ABB31116.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15]
          Length = 431

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 8/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R +    +F ++      +  Q      ++ I  G     L  P 
Sbjct: 151 CDAFCSYC--IVPYARGRSRSVSFSEALAGIRNFAAQGFREVVLTGIHLGAYGLDLAPPT 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+  +L+       V      ++E  P+ +         ++      + + +QS +++ L
Sbjct: 209 NLLALLEASEAEKAVPRLRVGSVE--PNELTDALVDFLARSETVCPHLHIPLQSGDDRVL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +GR + A+     +     + P +    D+I   P +T  +++  ++      V  L 
Sbjct: 267 ERMGRRYTAAFFRERVERLVAVVPDIFIGCDVIAGFPGETDEEFQNTVRLIEELPVASLH 326

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +  +GT   +M    D
Sbjct: 327 VFPYSRREGTAAARMEGQVD 346


>gi|288930449|ref|YP_003434509.1| radical SAM protein [Ferroglobus placidus DSM 10642]
 gi|288892697|gb|ADC64234.1| Radical SAM domain protein [Ferroglobus placidus DSM 10642]
          Length = 465

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 82/243 (33%), Gaps = 20/243 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   S     +  +    ++ + EM+W+      + I+           +  +
Sbjct: 199 CPFSCLYC--VSSKFFGRRYRSRSAENVVEEMKWLEDEFNAKHIAFSD----DTFTLSKK 252

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I + I +      ++  +  +   +++    +  ++AG  R+  GV+S  E+ L F
Sbjct: 253 RVESICEKIKEEGV---DLTWSCASRADTIDRELVRIMKRAGCTRMYFGVESASERILNF 309

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +  +      AI + +          I   P ++  + +  L+ A+    D+     L
Sbjct: 310 YRKKLDIKAVERAIRICKEEGIETVCSFIIGAPDESEEEMKRTLKLAMKLDPDYAQFSIL 369

Query: 208 TIEKGTLFY-----------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           T   GT  Y           K ++D     P    A       +   +   +  Y    +
Sbjct: 370 TPYPGTELYEIAEKENLLITKNYEDYTAGKPVMRNAHLSPERIKEFLNYCYMKFYARPKY 429

Query: 257 SFL 259
            F 
Sbjct: 430 LFK 432


>gi|322421669|ref|YP_004200892.1| hypothetical protein GM18_4202 [Geobacter sp. M18]
 gi|320128056|gb|ADW15616.1| conserved hypothetical protein [Geobacter sp. M18]
          Length = 302

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 82/219 (37%), Gaps = 16/219 (7%)

Query: 32  CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      S+     VG    ++     M  +R+    R I+  +F   + +    + 
Sbjct: 42  CIFCGGKGSGSYGILQGVGVAEQLEHAKEVM--VRKYKAARFIA--YFQSYSNTYAPVER 97

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  + D       V+  V + +   P  +         +        + LG+QS  +++L
Sbjct: 98  LRALYDEALS---VADVVGLIVGTRPDCLPEETLDLLAEYARRCYFWLELGLQSPLDRTL 154

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +GR H+ +   AA+   +    R+   +I  LP ++  +     +      V+ + ++
Sbjct: 155 SAIGRGHDLASFTAAVEQCQKRGIRVCAHIILGLPGESREEMLSGAEFLNRCGVEGVKIH 214

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            L + +GT   ++++  ++ L   +  V    L      
Sbjct: 215 LLHVMRGTRLAELYQAEEVPLLDRDSYVG---LACDFLE 250


>gi|255306380|ref|ZP_05350551.1| putative radical SAM-superfamily protein [Clostridium difficile
           ATCC 43255]
          Length = 311

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 51  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   + ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 104 ---LEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 160

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 161 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGI 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 221 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 268


>gi|56419838|ref|YP_147156.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
           kaustophilus HTA426]
 gi|81347575|sp|Q5L0E8|MIAB_GEOKA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56379680|dbj|BAD75588.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 531

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +RQL   G + I+    ++   G   
Sbjct: 235 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRQLAAQGYKEITLLGQNVNAYGKDF 288

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + I+   +  ++D + K   +         ++P   +    +   K G  V  I L VQS
Sbjct: 289 TDIQ-YGLGDLMDELRK---IDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQS 344

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 345 GSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSLYREV 404

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT    M  +  + +  E +     +L Q I +   +  YE
Sbjct: 405 EFDSAYTFIYSPREGTPAANMKDNVPMEVKKERLKRLN-DLVQEIAAK-KMKQYE 457


>gi|254974964|ref|ZP_05271436.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-66c26]
 gi|255092353|ref|ZP_05321831.1| putative radical SAM-superfamily protein [Clostridium difficile CIP
           107932]
 gi|255314092|ref|ZP_05355675.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-76w55]
 gi|255516770|ref|ZP_05384446.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-97b34]
 gi|255649870|ref|ZP_05396772.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-37x79]
          Length = 311

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 51  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   + ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 104 ---LEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 160

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 161 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGI 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 221 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 268


>gi|225174473|ref|ZP_03728472.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
 gi|225170258|gb|EEG79053.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
          Length = 291

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 94/236 (39%), Gaps = 11/236 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C     + R    +   +     ++   R   G  S+ +IF   G   +++ 
Sbjct: 25  CPHNRCTFCS----MYRQSRFRLRSVDEIKEDLAMARDYYGD-SVRTIFLADGNTIVMKT 79

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQSL 145
            ++  IL  I + +     +     A   + +   ++   R+AG++RI  G++S +++ L
Sbjct: 80  DHLVEILRCIRQLFPAVERITSYGSARFITKKKPADWVALREAGLSRIHSGMESGDDEVL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ--WEMELQRALSYAVDHLS 203
           R   +  +A   + A  + ++    +S  +I     +T+++   +   +       D + 
Sbjct: 140 RLQNKGVDAQGIVRAGQMIKDAGIELSEYIIVGAGGKTLSEQHAQNSARVLNRINPDFIR 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE--ISNHS 257
           L  L   +GT  Y M K GD  L S + A+    L            Y   ISN+ 
Sbjct: 200 LRTLMPAQGTPLYDMFKKGDFKLLSPHEALAETRLFIEHLEGISSTLYSDHISNYW 255


>gi|34540822|ref|NP_905301.1| radical SAM family protein [Porphyromonas gingivalis W83]
 gi|34397136|gb|AAQ66200.1| radical SAM protein, TIGR01212 family [Porphyromonas gingivalis
           W83]
          Length = 311

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 74/219 (33%), Gaps = 9/219 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    + +   +  +     + +  +          +F   T +  E   I  
Sbjct: 48  CTYCNNQTFSPAFAMKDRSVSEQLRDGIAFFARKYPHMK-YLAYFQAYTNTYGEQAEIIR 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
             +     + V   V I I   P  +  +     +         +  GV+S  + +LR +
Sbjct: 107 KYEEALNYYDV---VGIIIGTRPDCMPDSLLSYLKDLSERVFVLVEYGVESTLDATLRRV 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  S+++AAI         +   LI  LP ++         +  +  V  L L+QL 
Sbjct: 164 NRGHLWSDSMAAIERTAKTGLPIGVHLILGLPGESREDILRHADKISALPVTTLKLHQLQ 223

Query: 209 IEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITSA 245
           I +GT   K +     D    SE   +DL          
Sbjct: 224 IIRGTAMAKEYAESPSDFHFYSEEEYIDLCLDFIERLRP 262


>gi|308160323|gb|EFO62816.1| Histone acetyltransferase Elp3 [Giardia lamblia P15]
          Length = 588

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 3/152 (1%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +TIE  P   E  +     + G  R+ +GVQS+ +     + R H     I     +
Sbjct: 220 CVALTIETRPDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQS 279

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   +M   ++  LP  +  +      EL ++ +Y  D L +Y   I +GT  Y+  + 
Sbjct: 280 KDAGFKMIAHMMPNLPFTSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYERWRL 339

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +       +        + +   +  Y I
Sbjct: 340 NKYLRNLPTHKLIYLLTMIYVLAPPWVRIYRI 371


>gi|297530521|ref|YP_003671796.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. C56-T3]
 gi|297253773|gb|ADI27219.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. C56-T3]
          Length = 531

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +RQL   G + I+    ++   G   
Sbjct: 235 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRQLAAQGYKEITLLGQNVNAYGKDF 288

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + I+   +  ++D + K   +         ++P   +    +   K G  V  I L VQS
Sbjct: 289 TDIQ-YGLGDLMDELRK---IDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQS 344

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 345 GSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSLYREV 404

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT    M  +  + +  E +     +L Q I +   +  YE
Sbjct: 405 EFDSAYTFIYSPREGTPAANMKDNVPMEVKKERLKRLN-DLVQEIAAK-KMKQYE 457


>gi|171692605|ref|XP_001911227.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946251|emb|CAP73052.1| unnamed protein product [Podospora anserina S mat+]
          Length = 572

 Score = 76.9 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 75/425 (17%), Positives = 139/425 (32%), Gaps = 77/425 (18%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              +  ++ L
Sbjct: 115 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKAL 174

Query: 66  TGPRSISSIFFGGGTPSLIEP----QNIALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +      + I+ + + ++   T   +             V I
Sbjct: 175 GHSVDKVEYIIMGGTFMSLPESYRNEFISQLHNALSGYGTPDVDEAVRAGEQSSIKCVGI 234

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P     ++     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 235 TIETRPDYCLASHLTDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLSKDAG 294

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 295 FKVVSHMMPDLPNVGMERDLDQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 354

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 355 GYTPNGLI---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 409

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   +++VR++  A    E FL+ E    + L+  L
Sbjct: 410 -FGTSCRDVRTREVGVNEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILVGLL 467

Query: 336 RLREGISVKDWE-MLAGRNLDIECE---------------RNLQRQGF--IERVQFSRLR 377
           RLR+      +   L G+   +  E               R  Q QGF  +   +  R+ 
Sbjct: 468 RLRKCSEKYTFRPELTGQPTSLVRELHVYGMAVPVHARDPRKFQHQGFGTLLMEEAERIA 527

Query: 378 CTQRG 382
             + G
Sbjct: 528 RDEHG 532


>gi|156937162|ref|YP_001434958.1| radical SAM domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566146|gb|ABU81551.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 421

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC     F + VR   +       S + +M          +  S    G  P+L
Sbjct: 165 CPFACSYCQTTFMFKAFVRHRSIENVIKYASIMRDMGLKDMRFITPNALSYGGDGRRPNL 224

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEE 142
              + +  +L  + K    +       E  P  V   + +  +K   N R+ +G QS  +
Sbjct: 225 ---EAVEELLARLKKLGVRTFFGSFPSEVRPEFVNEESIKILKKYVSNKRLVIGAQSASD 281

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             L+ + R H   + + A+ ++         D I  LP ++       L+     A    
Sbjct: 282 AVLKRIHRGHAWEDVVNAVEVSVKHGFVPEVDFILGLPGESEEDMMETLRGMRKLASMGA 341

Query: 203 S--LYQLTIEKGTLFY 216
              L+      GT   
Sbjct: 342 RAHLHYFMPLPGTPLA 357


>gi|62363378|gb|AAX81963.1| putative bacterial Fe-S oxidoreductase [Brachyspira hyodysenteriae]
          Length = 323

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 30/241 (12%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  K     C +C+ NS+  +     E  I +    +  ++   G       +F  GTP 
Sbjct: 39  CAHKVNEGGCRFCNLNSY--KPPYVTEEDINN--QWINGLKNYKGRYQKFYGYFQLGTP- 93

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGV 137
            + P      L    K       V +   A    +E    +              + +G+
Sbjct: 94  -LSPLASKESLKYANKLVHFDECVGLMFGARSDMLEDEVLKELSDLSELLGKEIWLEMGL 152

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI--HLARNIFPRMSFDLIYALPK------------QT 183
           QS  +++ +F+ R H+       +           +   +I+ LPK            ++
Sbjct: 153 QSSNDETSKFINRGHDYKSFAETVNHIKNNYNNIIICTHIIFGLPKKFNDNDKKTIELES 212

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++   +  +D +  +QL I KG+ F  M+KD +     E+  +DL +   S T
Sbjct: 213 RDDMIKTVKDISTLKIDAVKFHQLDIVKGSYFENMYKDCEFPTLDEDFYIDLMSDAISFT 272

Query: 244 S 244
            
Sbjct: 273 R 273


>gi|255530916|ref|YP_003091288.1| hypothetical protein Phep_1005 [Pedobacter heparinus DSM 2366]
 gi|255343900|gb|ACU03226.1| conserved hypothetical protein [Pedobacter heparinus DSM 2366]
          Length = 325

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 86/251 (34%), Gaps = 18/251 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC+ +S             +     M+  +          ++F   
Sbjct: 46  CPNRDGSKGYGGCTYCNVDSFTPELSRKLPTVREQLEQGMERGKNFYKADKFI-VYFQPN 104

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +      + ++ D      T +  V  ++   P  ++        ++  +R    + +
Sbjct: 105 TNTYAPVHYLKMMYDEALSINT-ADVVGFSVGTRPDCIDAEKV-ALLESYADRFDVDLEM 162

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G++S+ +++L  + R  +  E +AA+ L  N    +    I+  P +T       +    
Sbjct: 163 GMESIYDETLNQINRGCSHGEFVAAVKLLENSKLDLCVHTIFGFPWETEEMMLGYIHEIN 222

Query: 196 SYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA--YE 252
            +  +  +  + L I +G++    +K     L S     DL      +     +    + 
Sbjct: 223 RFPQIKFVKFHHLHIVEGSIMGVKYKKQPFKLFSLEEYTDLLCKLIPLLRPDIVIQRLFG 282

Query: 253 ISNHSFLGAES 263
           IS+   L A +
Sbjct: 283 ISDWDLLIAPN 293


>gi|291296231|ref|YP_003507629.1| RNA modification enzyme, MiaB family [Meiothermus ruber DSM 1279]
 gi|290471190|gb|ADD28609.1| RNA modification enzyme, MiaB family [Meiothermus ruber DSM 1279]
          Length = 440

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 24/232 (10%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           + +     +++      +L  +V     C   C YC                    L E+
Sbjct: 120 LSFREELTHHLPPAPQGALSAFVSIIRGCNHHCTYC---IVPTTRGPEVSRHPDLILREV 176

Query: 60  QWMRQ-------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           + ++        L G    S      G PS    + + L+          ++       +
Sbjct: 177 EQLKAAGVLEVTLLGQNVNSYGKDQPGFPSF--AELLRLVAQVGIPRIKFTT-------S 227

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P +   +      +       I L VQS   + LR +GR +     +  I   R   P 
Sbjct: 228 HPVNFTDDVIAAMAETPQICRYIHLPVQSGSNRVLRRMGREYRREWYLDRIRAIREAMPD 287

Query: 171 M--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +  S D+I   P +T   ++  L        D   ++  +   GT  YK  +
Sbjct: 288 VVLSTDIIVGFPGETEEDFQATLSLYDEVRYDSAYMFIYSPRPGTPSYKHFQ 339


>gi|260683028|ref|YP_003214313.1| putative radical SAM-superfamily protein [Clostridium difficile
           CD196]
 gi|260686626|ref|YP_003217759.1| putative radical SAM-superfamily protein [Clostridium difficile
           R20291]
 gi|260209191|emb|CBA62438.1| putative radical SAM-superfamily protein [Clostridium difficile
           CD196]
 gi|260212642|emb|CBE03682.1| putative radical SAM-superfamily protein [Clostridium difficile
           R20291]
          Length = 314

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 54  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 106

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   + ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 107 ---LEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 163

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 164 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGI 223

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 224 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 271


>gi|240103836|ref|YP_002960145.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
 gi|239911390|gb|ACS34281.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
          Length = 424

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 72/234 (30%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C  +C YC    +++ +++            + + R++   R I+   F  G+P  I   
Sbjct: 174 CPFRCYYC-QTPYIKGFRMRHRP----IDQIVHYSRRMKDMRYITPNAFAYGSPGAILKL 228

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
            + + +   L  + K            E  P  V     +       NR +++G QS ++
Sbjct: 229 NKLEALLRALQPLRKEGRRLFYGTFPSEVRPEFVLPETLELLIDYADNRRLAIGAQSGDD 288

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVD 200
             L+ + R H       A+            D I  LP +T       ++    +     
Sbjct: 289 AMLKAMHRLHRVEHVKRAVEYMVEYGFEPVVDFIVGLPNETAESQRKSIELMEWIMRKGG 348

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  +      GT + +        L  E          +           E+S
Sbjct: 349 KVRAHYFMPLPGTPWAR---CKPSPLSEEMKRFLGRMAARGKIEGSWGIQIELS 399


>gi|170036115|ref|XP_001845911.1| elongator component [Culex quinquefasciatus]
 gi|167878602|gb|EDS41985.1| elongator component [Culex quinquefasciatus]
          Length = 446

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 93/266 (34%), Gaps = 23/266 (8%)

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
                + +  + ITIE  P      +       G  R+ +GVQS+ E   R   R H   
Sbjct: 106 RYSEKSHTKCIGITIETRPDYCLNRHLSDLLAYGCTRLEIGVQSVYEDVARDTNRGHTVK 165

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKG 212
               +  ++++   ++   ++  LP   + +      E      +  D L +Y   + +G
Sbjct: 166 ATCESFQMSKDAGFKVVSHMMPDLPNVDIERDVEQFIEFFENPDFRADGLKIYPTLVIRG 225

Query: 213 TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAES 263
           T  Y++ K G       +  V   +L   I +        Y +          S +   +
Sbjct: 226 TGLYELWKTGRYKSYPPSTLV---DLVAKILALVPPWTRVYRVQRDIPMPLVSSGVEHGN 282

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FL 321
           L  L   R  D      GA  R           I      + ++++R++  A    E FL
Sbjct: 283 LRELALARMKDL-----GADCRDVRTREVGIQEIHNKVRPYEIELIRRDYVANGGWETFL 337

Query: 322 SSEQQADEFLMMGLRLREGISVKDWE 347
           S E    + L+  LRLR+  S   + 
Sbjct: 338 SYEDPKQDILVGLLRLRK-CSPATFR 362


>gi|14591464|ref|NP_143544.1| hypothetical protein PH1701 [Pyrococcus horikoshii OT3]
 gi|3258131|dbj|BAA30814.1| 428aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 428

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-LIEP 86
           C   C YC        Y  G     +     +++ R++   R I+   F  G+P  +++ 
Sbjct: 178 CPFGCYYC-----QTPYAKGFRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGGILKV 232

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEE 142
           + +  +L  +         +       E  P  V     +   K     RI++G QS + 
Sbjct: 233 EKVEALLRALQPLRKEGRRLFYGTFPSEVRPDFVTRETLELLVKYTDTKRIAIGAQSGDN 292

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
             L+ + R H     I A+ L+         D I  LP ++    +    L + +     
Sbjct: 293 AMLKAMHRLHKVEHVINAVELSLEYGLEPVVDFIVGLPNESPESQKKSIELMKWIMRKGG 352

Query: 201 HLSLYQLTIEKGTLFYK 217
            +  +      GT + +
Sbjct: 353 KVRAHYFMPLPGTPWAR 369


>gi|307243935|ref|ZP_07526060.1| radical SAM protein, TIGR01212 family [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492757|gb|EFM64785.1| radical SAM protein, TIGR01212 family [Peptostreptococcus stomatis
           DSM 17678]
          Length = 317

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 84/228 (36%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N ++ F  +++ M +   P++    +F   T +   
Sbjct: 54  CAYCSKDGSGDF------AGNPRDNLVKQF-KDIKEMMEKKWPQAKYIGYFQAFTNTYAP 106

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ D           V ++I      ++ +      +        + LG+Q++ +
Sbjct: 107 ---LEVLKDKYETILDQDGVVGLSISTRSDCIDDDLLDYLAQLNTRTNLWVELGLQTVHD 163

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           Q+   + R H     +  ++  R+    +   +I  LP +T       ++R     +  +
Sbjct: 164 QTSNIINRGHGLDVFVDCVNRLRSREIEVVAHVINGLPGETYDMMMETIRRVSHMDIQGV 223

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + KGT    M   G+L L S+   VDL      I     +  
Sbjct: 224 KIHLLHVIKGTPMVNMLNKGELKLLSKEEYVDLVCDQLEILPQEMVIH 271


>gi|15643281|ref|NP_228325.1| hypothetical protein TM0515 [Thermotoga maritima MSB8]
 gi|4981028|gb|AAD35600.1|AE001728_1 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 303

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 94/244 (38%), Gaps = 17/244 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YCD  +    +       I+  + EM+   +  G +   + +F   
Sbjct: 29  CPNRDGTKGKGGCIYCD--ATGSGFTTLMRLPIREQVMEMKKKYEKRGIKKFIA-YFQSF 85

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLG 136
           + +    + +    +   +     S V++++   P  V     + F+ ++K     + LG
Sbjct: 86  SNTYAPVEMLR---ERYEEALVDDSIVQLSVSTRPDLVPERVLDLFEEFKKRVDVSVELG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   ++L+ + R H  +E + A    +     +   +I  LP   M       +   +
Sbjct: 143 LQTANYRTLKKINRGHTLAEFVDAAVRVKKRGIELVVHVILNLPWDDMEDVVETAKILSA 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VD + L+ L + +GT   +M+K G++ + S    +D         S + +    +++ 
Sbjct: 203 LDVDGVKLHSLYVVEGTKLAEMYKKGEVKICSLEEYIDRAITFLEYLSPNVVIHRLVADP 262

Query: 257 SFLG 260
              G
Sbjct: 263 PRKG 266


>gi|326468568|gb|EGD92577.1| histone acetyltransferase [Trichophyton tonsurans CBS 112818]
 gi|326479951|gb|EGE03961.1| elongator complex protein 3 [Trichophyton equinum CBS 127.97]
          Length = 576

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 127/383 (33%), Gaps = 56/383 (14%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 176

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +  +     I+ + + ++   T + +             V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPEEYRETFISQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 237 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E      +  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 357 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 412

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 413 GTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 471

Query: 338 REGISVKDWE-MLAGRNLDIECE 359
           R+  S   +   L G+   +  E
Sbjct: 472 RKCSSKYTFRPELTGQPTSLVRE 494


>gi|15642956|ref|NP_227997.1| hypothetical protein TM0182 [Thermotoga maritima MSB8]
 gi|4980678|gb|AAD35275.1|AE001703_4 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 397

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 83/256 (32%), Gaps = 30/256 (11%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQEN-----FIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC       R    ++      + +  +   + + +   P S 
Sbjct: 138 GIYMPIEITRGCPFSCAYCQTPIIAGRRVRHRDVDVVVHYAKLGVKHGRKLARFIAPNSF 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAG 129
                 G TP++   + I  +L G+ K   +          E  P SV     +  +K  
Sbjct: 198 GYGSKNGVTPNV---EKIEELLYGLKK-VGIEEIYFGTFPSEVRPESVTDEVLKVVKKYV 253

Query: 130 VNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
            NR I +G QS  ++ L+ + R H   +   AI            D I+  P +T    E
Sbjct: 254 NNRSIVIGAQSGSDRILKIIKRGHTVEQVEEAIEKISLHGFIPHVDFIFGFPFETEEDVE 313

Query: 189 MELQRALSYAVDH----LSLYQLTIEKGTLFYKM-------HKDGDLVLPSENVAVDLYN 237
                 +   V+     +  +      GT  +              L   +    +D Y 
Sbjct: 314 KTFSFIVKI-VERYGAKIHAHTFMPLPGTELFNAGPGRLTEVHYKFLGRLASKGILDGYW 372

Query: 238 LTQSITSAHGLHAYEI 253
           + Q + +      YEI
Sbjct: 373 MKQEMLA---RKVYEI 385


>gi|118581790|ref|YP_903040.1| magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Pelobacter propionicus DSM 2379]
 gi|118504500|gb|ABL00983.1| Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Pelobacter propionicus DSM 2379]
          Length = 485

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 86/256 (33%), Gaps = 21/256 (8%)

Query: 22  YVH-----WPF-----CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           Y H       F     C  KC YC +   +  +     +  +  + E++++ +      +
Sbjct: 199 YAHTKPPVISFFAGRGCPNKCFYCVYPQVMFGHTYRHRS-AEDVVGEIEYIVKEFP--EV 255

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
             +       ++ +  ++  I D I      +S  VE  +     ++        R+AG 
Sbjct: 256 REVLIDDDNFTV-DQDHVMRICDIIINRGLRLSWTVEARV-----NLRYEVMVAMRRAGC 309

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             +  G +S ++Q L  + +    ++A      A+    R+    +     +T    E  
Sbjct: 310 RLLVAGFESGDQQILDNMCKGATVTQAEQFCQNAKKAGLRVHGCFMVGNRGETRDSMERT 369

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLH 249
           LQ AL    D    + L +  GT  Y   KD   +           + L   + +   L 
Sbjct: 370 LQLALKLKPDTAQFFPLMVYPGTRAYMWAKDNSYIHAKSYRDWLDEDGLHNCVLNTDKLT 429

Query: 250 AYEISNHSFLGAESLH 265
           A E+ N         +
Sbjct: 430 AKELVNFCDEARRKFY 445


>gi|261419508|ref|YP_003253190.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
           sp. Y412MC61]
 gi|319766323|ref|YP_004131824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. Y412MC52]
 gi|261375965|gb|ACX78708.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. Y412MC61]
 gi|317111189|gb|ADU93681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. Y412MC52]
          Length = 531

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 89/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +RQL   G + I+    ++   G   
Sbjct: 235 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRQLAAQGYKEITLLGQNVNAYGKDF 288

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + I+      + D + +   +         ++P   +    +   K G  V  I L VQS
Sbjct: 289 TDIQ----YSLGDLMDELRKIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQS 344

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 345 GSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSLYREV 404

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT    M  +  + +  E +     +L Q I +   +  YE
Sbjct: 405 EFDSAYTFIYSPREGTPAANMKDNVPMEVKKERLKRLN-DLVQEIAAK-KMKQYE 457


>gi|167745616|ref|ZP_02417743.1| hypothetical protein ANACAC_00308 [Anaerostipes caccae DSM 14662]
 gi|167654928|gb|EDR99057.1| hypothetical protein ANACAC_00308 [Anaerostipes caccae DSM 14662]
          Length = 313

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 14/209 (6%)

Query: 35  CDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI-A 90
           C F + V          +           ++ +  G +     +F   T + +       
Sbjct: 39  CSFCAGVGTGFEAMSETVPVKDQLNRTKAYIGKRYGAKKF-LAYFQNYTNTFLPIGEFRN 97

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSL 145
            +L+ + +       V I+I   P  +  +  +   +    R     I  G+Q++   +L
Sbjct: 98  YVLEALEE----EDIVGISISTRPDCIRKDYLEFLNEIQQERGAAVTIEFGLQTVNYHTL 153

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R H  +E + A+ L       +   +I  LP  T+       +   +  V  +  +
Sbjct: 154 KKMNRGHTLAEYLNAVLLTAPFGFEICTHVILNLPGDTVEDAVETARVISALPVSVVKAH 213

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            L I K ++ Y+ ++DG + L ++   ++
Sbjct: 214 SLYIPKNSVLYEEYRDGKISLCTKEEYIN 242


>gi|302840225|ref|XP_002951668.1| hypothetical protein VOLCADRAFT_61745 [Volvox carteri f.
           nagariensis]
 gi|300262916|gb|EFJ47119.1| hypothetical protein VOLCADRAFT_61745 [Volvox carteri f.
           nagariensis]
          Length = 600

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 69/231 (29%), Gaps = 39/231 (16%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +   +Q   ++   R +
Sbjct: 91  CPHIATTGNICIYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYVQARGRVDQLRKL 150

Query: 72  SSIFFG------GGTPSLIEPQN----IALILDG----------IAKNWTVSSNVEITIE 111
             +         GGT   +        I  + D                + +  + +TIE
Sbjct: 151 GHVVDKVEYILMGGTFMSLPADYRDYFIRNLHDALSGHASSCAVRYSEESRTKCIGLTIE 210

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
             P     ++       G  R+ +G+QS+ E   R   R H           A++   ++
Sbjct: 211 TRPDYCARSHLTDMLSYGCTRLEIGLQSIYEDVARDTNRGHTVEAVKQCFVGAKDAGFKV 270

Query: 172 SFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              ++  LP        +   E      +  D L LY   + +GT  Y++ 
Sbjct: 271 VVHMMPDLPGVGWERDIECFREFFENPDFRTDGLKLYPTLVIRGTGLYELW 321


>gi|210630955|ref|ZP_03296700.1| hypothetical protein COLSTE_00585 [Collinsella stercoris DSM 13279]
 gi|210160270|gb|EEA91241.1| hypothetical protein COLSTE_00585 [Collinsella stercoris DSM 13279]
          Length = 663

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P +V        R+ G  ++ +GVQSL+++ L   GR    +    A  L R
Sbjct: 300 VGLVIETRPDAVTPAALTTIRRLGCTKVQMGVQSLDQEVLNANGRGMGVARIQEAFELLR 359

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++    +  L   T  + + + +R +    +  D + LY   + +G      ++ G
Sbjct: 360 VFGFKIHAHAMANLFGSTPERDKRDYERLVRERPFQPDEIKLYPCALIEGAQLCACYERG 419

Query: 223 DLVLPSENVAVD 234
                SE+  +D
Sbjct: 420 TWRPYSEDELLD 431


>gi|160886920|ref|ZP_02067923.1| hypothetical protein BACOVA_04934 [Bacteroides ovatus ATCC 8483]
 gi|156107331|gb|EDO09076.1| hypothetical protein BACOVA_04934 [Bacteroides ovatus ATCC 8483]
          Length = 325

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKSIAIQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 103 LKRKYEEALAVDGVVGLVIGTRPDCMPESLLRYLEDLNKHTFLMVEYGIESTCDETLKRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T      + +      +  L ++QL 
Sbjct: 163 NRGHTYADTVEAVCQTAACGILTGGHIILGLPGETHDTMVAQAEILSDLPLATLKIHQLQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     +          N   +  +L       
Sbjct: 223 LIRGTRMAHEYDVTPAGFHLFNEVEEYIDLVIDYVEH 259


>gi|148266129|ref|YP_001232835.1| putative radical SAM protein [Geobacter uraniireducens Rf4]
 gi|146399629|gb|ABQ28262.1| conserved hypothetical radical SAM protein [Geobacter
           uraniireducens Rf4]
          Length = 305

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 75/222 (33%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC   +    + + +   +   L   + +            +F   + +    + +  
Sbjct: 42  CIYCG-GAGSGSFGIVRGASVAEQLEHGKEVMVRKYKAKKFLAYFQPYSNTYAPAERLRA 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +   V   V + +   P  +         +        + LG+QS  +++L  +
Sbjct: 101 IYD---EALAVEDVVGLIVGTRPDCLPAETLDLLAEYAQRTYFWLELGLQSHLDRTLSLI 157

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           GR H+ S    A+   ++   R+S  +I  LP ++  +         +  VD + ++ L 
Sbjct: 158 GRGHDFSSFTRAVKECKDRHIRVSAHVILGLPGESREEMLAGADILNALGVDGVKIHLLH 217

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + T     +  G + +   +  V +            +  
Sbjct: 218 VMRDTKLADDYLHGRVKVMERDEYVGVVCDYLERLDPKIIVQ 259


>gi|229495982|ref|ZP_04389706.1| radical SAM protein [Porphyromonas endodontalis ATCC 35406]
 gi|229317074|gb|EEN82983.1| radical SAM protein [Porphyromonas endodontalis ATCC 35406]
          Length = 311

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 74/216 (34%), Gaps = 8/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    + +   +  Q     + + R           +F   T +  E + +  
Sbjct: 52  CTYCNNATFSPSFALQPGSITQQLERGIDFFRHKYPHMR-YLAYFQSYTATYGEAEQLIA 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +  A+   V   V + I   P  +     + F    +     I  G++S  ++SL ++
Sbjct: 111 LYEEAARFPGV---VGLVIGTRPDCMPEVLLDYFSDLSRRCFVLIEYGIESTLDRSLEYI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+   ++  I         +   LI  LP +T  +      R     +  + L+QL 
Sbjct: 168 RRGHSWRCSLETIKATHEAGLPVGAHLILGLPGETRREMLDHALRLNDLPISLVKLHQLQ 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           I + T+    ++           A +   L     +
Sbjct: 228 IVRHTIMAHQYRTNPEQF-HLFTAEEYAELCLDFLA 262


>gi|195953791|ref|YP_002122081.1| conserved hypothetical radical SAM protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933403|gb|ACG58103.1| conserved hypothetical radical SAM protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 312

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 19/239 (7%)

Query: 26  PF-CVKK--------CPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           PF C           C YC   +  R   +    +  +   + +   ++  G      I+
Sbjct: 31  PFTCPNIDGTKATGGCTYC--LTGTRPAHISPLMDLREQISSGIAQAKRRYGDNIYFYIY 88

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--- 132
           +   + +  +   +  + D   +   V   V I I   P  V  +  +  +         
Sbjct: 89  YQSYSNTYGDSDFLKSVYDVALEFENV---VGIDIGTRPDCVPEDVLELIQTYTDKLDVW 145

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMEL 191
           I  G+QS    +LR++ R H AS+ + A+   R      +   LI   P++ +       
Sbjct: 146 IEYGLQSSHFSTLRWINRAHGASDFVDAVLRTRKYKGINICAHLIVGFPQEDLEDNLETA 205

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  ++  V+ + ++ L I K T   K + +    L +             I     +  
Sbjct: 206 KLIVALNVNGVKIHPLHIIKNTKMAKDYLENPFKLLTLEEYAYRAARIIEILPQTMVIH 264


>gi|20094331|ref|NP_614178.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
 gi|19887387|gb|AAM02108.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 457

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 68/191 (35%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  +S +   K   ++     + E+ ++ +  G   +  + F     +     
Sbjct: 197 CPFRCLFCA-SSRIFGPKWRGKSP-DRVVEEISYLVEELG---VERLEFVDDVFT----A 247

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +   K      +V     A   ++     +  R+ G   + +G +S   ++L+ 
Sbjct: 248 HKRRVREICEKMREEGIDVPWDCGARADTLTPELARTIREHGCRTVYVGAESASNETLKR 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     + IA   +A+    R+    I   P +        ++ A     D++     
Sbjct: 308 INKGITVQDVIACRKVAKRHGLRILLSFILGFPWEDREDVFRTIKFARRLEPDYVQFTVC 367

Query: 208 TIEKGTLFYKM 218
           T   GT  Y +
Sbjct: 368 TPYPGTPLYDL 378


>gi|269120688|ref|YP_003308865.1| hypothetical protein Sterm_2080 [Sebaldella termitidis ATCC 33386]
 gi|268614566|gb|ACZ08934.1| conserved hypothetical protein [Sebaldella termitidis ATCC 33386]
          Length = 316

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 80/221 (36%), Gaps = 17/221 (7%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF   +    + ++   ++    ++  ++  G       +F   + +   
Sbjct: 51  CIFCSKRGSGDFALEITSENLKKQ--FEAAKNSIR--KKWPGINK-YIAYFQAYSNTY-- 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEE 142
             +I ++ +      ++ + V ++I      ++    +   +        + LG+QS  +
Sbjct: 104 -ADIKILREKYETVLSLKNVVGLSIATRADILDKEILEYLGELNKKTFLWVELGLQSSND 162

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++ + + R H+    + A    R    R+   +I  LP +T       ++      ++ +
Sbjct: 163 KTAQLINRGHDFRTFMKAAEQLRERNIRVCVHIINGLPGETYDDMIKTVKDISVLDINAV 222

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            ++ L I K T  +K+++     +      +        + 
Sbjct: 223 KIHMLYILKDTPLFKLYEKEKFSVMKREDYIQTVADQIELL 263


>gi|226311675|ref|YP_002771569.1| hypothetical protein BBR47_20880 [Brevibacillus brevis NBRC 100599]
 gi|226094623|dbj|BAH43065.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 322

 Score = 76.5 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 80/222 (36%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        +   +   ++    +++       P++    FF   T +    + +  
Sbjct: 59  CTFCS-ARGSGDFAGDRRMDLEKQFHDVKNRMHEKWPQAKYLGFFQAYTNTYAPVEELRE 117

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + + I +   V   V ++I   P  +  +  +   +        + LG+Q++ E + + +
Sbjct: 118 MYEVILQQEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHEHTAQLI 174

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    + A+   R    R+   +IY LP ++  +            V  + ++ L 
Sbjct: 175 NRAHDYQCYVDAVERLRKHNIRVCSHIIYGLPGESHEEMMQTADAVAHLDVQGIKIHLLH 234

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + T   K ++ G L   S+     L   T  I     +  
Sbjct: 235 LLRKTPMVKQYEAGLLEFLSQEEYTKLVVDTLEILPPEMIVH 276


>gi|289550913|ref|YP_003471817.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658416|ref|ZP_07911288.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           lugdunensis M23590]
 gi|289180445|gb|ADC87690.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496745|gb|EFU85068.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           lugdunensis M23590]
          Length = 514

 Score = 76.5 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 81/233 (34%), Gaps = 14/233 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +++L           G    S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIAEVKELAREGYQEITLLGQNVNSYGKDI 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D +     +         ++P        Q   + G  V  I L VQS    
Sbjct: 277 EDIDYELGDLLEAISKIDIPRVRFTTSHPWDFTDRMIQVIAQGGNIVPHIHLPVQSGNNA 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L      A +H
Sbjct: 337 VLKIMGRKYTRESYLELVSKIKAAIPNIALTTDIIVGYPNETEDQFEETLTLYDEVAFEH 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              Y  +   GT   KM  +  L +  + +      + Q   S   +  YE +
Sbjct: 397 AYTYLYSQRDGTPAAKMKDNVPLEVKKQRLQRLNQKVGQ--YSQQAMSHYENT 447


>gi|308270193|emb|CBX26805.1| hypothetical protein N47_A08340 [uncultured Desulfobacterium sp.]
          Length = 310

 Score = 76.5 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 75/217 (34%), Gaps = 12/217 (5%)

Query: 32  CPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C YC+   S    +  G     Q    +    ++    + I+  +F   + +    + + 
Sbjct: 43  CIYCNAQGSGTGAHGKGLSITQQLIAGKAALSKRYKAEKFIA--YFQSYSNTYAPYEKLK 100

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRF 147
            + D       ++    ++I   P  V  N  +       +    +  G+QS   ++L  
Sbjct: 101 SLYDEALSVENIAG---LSIGTRPDCVNENILKLLESYAKDSLIWVEYGLQSANNETLLR 157

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+      A++  +    ++   +I  LP +  +Q     +      +D + L+ L
Sbjct: 158 INRGHDFDCFKKAVNSTKGRGIKICAHVILGLPGEDKSQMLNTAKALAELKIDGIKLHLL 217

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + KGT    ++  G+     ++       L      
Sbjct: 218 YVVKGTEMEAIYLSGNYRCLEQDEYA---QLVCDFLE 251


>gi|313896981|ref|ZP_07830528.1| coproporphyrinogen dehydrogenase family protein [Selenomonas sp.
          oral taxon 137 str. F0430]
 gi|312974428|gb|EFR39896.1| coproporphyrinogen dehydrogenase family protein [Selenomonas sp.
          oral taxon 137 str. F0430]
          Length = 130

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 11 MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGP 68
          MT +   + GVYVH P+CVKKC YCDF S          QE +  +   E+         
Sbjct: 1  MTNK-KRAWGVYVHIPYCVKKCAYCDFASASMGGDTAREQEQYAAALRAEIMRTAPPLFA 59

Query: 69 R--SISSIFFGGGTPSLIEPQNIALILDG 95
          R   + +++FGGGTP+ +    +  I+  
Sbjct: 60 RFGDVVTVYFGGGTPTALPAHLLTGIIRA 88


>gi|167541048|gb|ABZ82034.1| elongation protein 3 homolog [Clonorchis sinensis]
          Length = 387

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 93/259 (35%), Gaps = 23/259 (8%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  V ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H
Sbjct: 36  TKCVGITIETRPDYCFKKHLGEMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFH 95

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
           L+++   ++   ++  LP     +   +         +  D L +Y   +  GT  Y++ 
Sbjct: 96  LSKDAGFKVVAHMMPDLPNVGWERDLAQFAEYFENPAFRSDGLKIYPTLVICGTGLYELW 155

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYW 270
           + G        + +   +L   I +        Y I          S +   +L      
Sbjct: 156 RSGRYRSYPSTMLI---DLVARILALVPPWTRVYRIQRDIPMPLVTSGVEHGNLRESVLA 212

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQAD 328
           R  +      GA  R           I    + + ++++R++  A    E FL+ E    
Sbjct: 213 RMAEL-----GASCRDIRTREVGIQEIHSRVKPYQIELIRRDYFANGGWETFLAYEDPYQ 267

Query: 329 EFLMMGLRLREGISVKDWE 347
           + L+  LRLR+  S + + 
Sbjct: 268 DILIGLLRLRQ-CSPQTFR 285


>gi|218887904|ref|YP_002437225.1| radical SAM protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758858|gb|ACL09757.1| conserved hypothetical radical SAM protein [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 372

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 2/164 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--SLGVQSLEEQSLR 146
           I  +   +     +   V   +   P  V+           +  +   LG+QS  + +L 
Sbjct: 99  IDKLRHVLGVLPVLPGIVGAAVGTRPDCVDNERLDLVAALPLPEVWLELGLQSAHDATLA 158

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+A+ +  A+  A     R+   LI  LP ++   +   +       V  +  + 
Sbjct: 159 RINRGHDAAASKRAVREAAARGLRVCAHLIAGLPGESGDDFLASVDWVNRLPVHGVKFHG 218

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + + T   +  + G+          DL            +  
Sbjct: 219 LYVCEHTALARQWRAGNYTPLEREDYADLIARALPRLRPEIVIQ 262


>gi|55981277|ref|YP_144574.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Thermus
           thermophilus HB8]
 gi|81364777|sp|Q5SME9|MIAB_THET8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|55772690|dbj|BAD71131.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 465

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 73/236 (30%), Gaps = 27/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C YC                    L E++ ++Q       L G    S      G 
Sbjct: 173 CNHHCTYC---IVPTTRGPEVSRHPDLILKEIELLKQAGVVEVTLLGQNVNSYGKDQPGF 229

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           PS    + + ++                 + ++P +   +  +   +       I L VQ
Sbjct: 230 PSF--AELLRMVGGMGIPRVRF-------LTSHPVNFTDDIIEAIAETPAICRYIHLPVQ 280

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ LR + R +  +  +  I   R   P   +S D+I   P +T   ++  L     
Sbjct: 281 SGSDRVLRRMAREYRRAHYLERIRKIREALPDAVLSTDIIVGFPGETEEDFQETLSLYDE 340

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              D   ++  +   GT  YK  +     LP E     L  L +           E
Sbjct: 341 VGYDQAYMFIYSPRPGTPAYKHFQ----DLPREVKVERLMRLIEKQKEWSYRRNLE 392


>gi|39995475|ref|NP_951426.1| radical SAM family protein [Geobacter sulfurreducens PCA]
 gi|39982238|gb|AAR33699.1| radical SAM protein, TIGR01212 family [Geobacter sulfurreducens
           PCA]
 gi|298504475|gb|ADI83198.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
           TIGR01212 family [Geobacter sulfurreducens KN400]
          Length = 305

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 13/196 (6%)

Query: 32  CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      S   R ++G           M ++ +  G       +F   + +    + 
Sbjct: 44  CIFCGGRGSGSFGIRPELGVA---DQLAHGMTYLSRRYGAEKF-LAYFQSYSNTYAPVER 99

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           + L+ D       V+    + +   P  +         +   +    + LG+Q+  +++L
Sbjct: 100 LRLLYDEALSVPGVAG---LIVGTRPDCLPPEVIDLLAEYARSTYFWLELGMQTSHDRTL 156

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L R H+A+    A    R    R+   +I  LP +T               +D + L+
Sbjct: 157 ALLNRGHDAASFQDAADRCRRRGIRLCAHVILGLPGETDADMLETAMMLNGVGIDGVKLH 216

Query: 206 QLTIEKGTLFYKMHKD 221
            L + K T    M++ 
Sbjct: 217 HLHVMKDTPLEVMYRQ 232


>gi|20093484|ref|NP_613331.1| hypothetical protein MK0044 [Methanopyrus kandleri AV19]
 gi|19886313|gb|AAM01261.1| Uncharacterized Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 335

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 88/238 (36%), Gaps = 13/238 (5%)

Query: 32  CPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      + +      ++   +    +M+  R+  G      ++F   T +   P  
Sbjct: 46  CLFCPKMG-RTIITPNVDPRKKLEEQARKQMEVFRERYGAEKF-LVYFYPATNTYAPPDV 103

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SLGVQSLEEQS 144
           +  + +   +   +   V ++I   P  +        +GY K G +    +GVQS   ++
Sbjct: 104 LEELYN---RALEMEDVVGLSIGTRPDCLPDEVLDILEGYVKEGYDVWLEIGVQSYHHRT 160

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR   R H  +E I AI  A+    R+   +I+ LP +T  +    ++      V+ + L
Sbjct: 161 LRRTRRGHGLAEVIDAITRAKERGIRIVNHIIFGLPGETRDEMLETVRVLSVLGVEAVKL 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           Y L + + T   +M+ D      S    + L        +   L    +S       E
Sbjct: 221 YPLVVLERTDLERMYYDRRYKPLSYREYIRLLADALERMAPTVLIQ-RLSKDRAPDEE 277


>gi|327300621|ref|XP_003235003.1| histone acetyltransferase [Trichophyton rubrum CBS 118892]
 gi|326462355|gb|EGD87808.1| histone acetyltransferase [Trichophyton rubrum CBS 118892]
          Length = 576

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 127/385 (32%), Gaps = 60/385 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 176

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +  +     I+ + + ++   T + +             V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPEEYRETFISQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 237 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E      +  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   ++   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 357 NYTPNALI---DIVARILAVVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALSRMKD-- 411

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               +  +  P   +++VR++  A    E FL+ E    + L+  L
Sbjct: 412 -FGTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILIGLL 469

Query: 336 RLREGISVKDWE-MLAGRNLDIECE 359
           RLR+  S   +   L G+   +  E
Sbjct: 470 RLRKCSSKYTFRPELTGQPTSLVRE 494


>gi|296242832|ref|YP_003650319.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
           11486]
 gi|296095416|gb|ADG91367.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
          Length = 443

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 79/240 (32%), Gaps = 21/240 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFGGGTPSLIEP--- 86
           C YC   S+++ + +   + I   +T  +   +L     R IS      G P    P   
Sbjct: 185 CFYC-QVSYLQGFTLRHRS-IDRIVTYAEIALKLGFKDLRFISPDSLSYGLPFSTSPVNL 242

Query: 87  QNIALILDGIA----KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLE 141
           + I  +++G+     K            E  P   + +  +  RK   NR + +G QS  
Sbjct: 243 EKIESLMEGLHAKTVKYGGRIFYGTFPSEVRPEHAQQDVLRTIRKYVANRELIIGGQSGS 302

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY--AV 199
           E+ L+ + R H   E   A+  A       S D I   P +T       L+ A       
Sbjct: 303 ERILKLIRRGHGVEEIEQAVESALREGFTPSVDFIIGFPSETEEDMLQTLKLAEKLVGKG 362

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV-------AVDLYNLTQSITSAHGLHAYE 252
             + L+      GT           V   +               LTQ I +   +  +E
Sbjct: 363 ARIHLHYYIPLPGTPLGLRKPAPLPVKVRKEWSRLVGAGKAYGSWLTQEILAKKIIELFE 422


>gi|296415161|ref|XP_002837260.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633121|emb|CAZ81451.1| unnamed protein product [Tuber melanosporum]
          Length = 571

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 127/367 (34%), Gaps = 65/367 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              +  +RQL
Sbjct: 116 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLRQL 175

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +        IA + + ++   T + +             V I
Sbjct: 176 GHSVDKVEFIIMGGTFMSLPESYRDGFIASLHNALSGYTTENVDEAVRLAEQSETKCVGI 235

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          LA++  
Sbjct: 236 TIETRPDYCLDQHLSSMLRYGCTRLEVGVQSLYEDVARDTNRGHTVKAVCETFKLAKDSG 295

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 296 YKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 355

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 356 NYTPNALI---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALSRMKD-- 410

Query: 277 GIGPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEFLM 332
             G    +   V +  V I   K+   P+  ++++R++  A    E FLS E    + L+
Sbjct: 411 -FG---TTCRDVRTREVGIQEVKNKVRPDQ-VELIRRDYTANGGWETFLSYEDPKQDILI 465

Query: 333 MGLRLRE 339
             LRLR+
Sbjct: 466 GLLRLRK 472


>gi|46199244|ref|YP_004911.1| hypothetical protein TTC0942 [Thermus thermophilus HB27]
 gi|81405796|sp|Q72J39|MIAB_THET2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|46196869|gb|AAS81284.1| conserved hypothetical protein [Thermus thermophilus HB27]
          Length = 465

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 73/236 (30%), Gaps = 27/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C YC                    L E++ ++Q       L G    S      G 
Sbjct: 173 CNHHCTYC---IVPTTRGPEVSRHPDLILKEIELLKQAGVVEVTLLGQNVNSYGKDQPGF 229

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           PS    + + ++                 + ++P +   +  +   +       I L VQ
Sbjct: 230 PSF--AELLRMVGGMGIPRVRF-------LTSHPVNFTDDIIEAIAETPAICRYIHLPVQ 280

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ LR + R +  +  +  I   R   P   +S D+I   P +T   ++  L     
Sbjct: 281 SGSDRVLRRMAREYRRAHYLERIRKIREALPDAVLSTDIIVGFPGETEEDFQETLSLYDE 340

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              D   ++  +   GT  YK  +     LP E     L  L +           E
Sbjct: 341 VGYDQAYMFIYSPRPGTPAYKHFQ----DLPREVKVERLMRLIEKQKEWSYRRNLE 392


>gi|302671636|ref|YP_003831596.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
           B316]
 gi|302396109|gb|ADL35014.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
           B316]
          Length = 317

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 30/219 (13%)

Query: 28  CVKK--------CPYCD------F-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           C  +        C +C       F     N   R   +  E+ I     ++   +     
Sbjct: 28  CPNRDGTVGTGGCTFCSEGGSGEFAAGAGNGFRRTSDLSDEDIITILDKQISEAKSKVMK 87

Query: 69  RSISS---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           +S +     +F   T +  + + +  +             V ++I   P  V  +     
Sbjct: 88  KSDARKFIAYFQSFTNTYGDSEFLRKLYTAAISR---DEVVILSIGTRPDCVGPDIVAML 144

Query: 126 RKAGVNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ 182
           ++    +   + LG+Q++ + + R   R ++    I A    +     +   LI  LP +
Sbjct: 145 KELNNIKPVWVELGLQTIHDDTARAFNRGYDLECFIDAYRRLKEAGLSVIVHLIMGLPGE 204

Query: 183 TMTQWEMELQRALSYAV--DHLSLYQLTIEKGTLFYKMH 219
                   ++         D + +  L I KGT+ Y+ +
Sbjct: 205 NREDMLESVRFLADLRPELDGIKIQNLQILKGTVMYQQY 243


>gi|284007351|emb|CBA72726.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 300

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 21/237 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+    V  +   Q+          Q ++++   +     +F   
Sbjct: 33  CPNRDGSLGRGGCTFCN----VASFSDEQQQQFSIQQQIAQKVKKIHRAQR-YLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +  E   + ++         +   V + +   P  V         +    G      L
Sbjct: 88  TNTYAEVAILKVLYQQALNQANI---VGLCVGTRPDCVSQPVLDLLVEYQQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +++L+ + R H+ +       +A      +   LI  LP +T  +    + R +
Sbjct: 145 GLQTSHDKTLKKINRGHDFASYQKIARMAGKKGLNVCVHLIVGLPGETTKENLQTISRVI 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              VD + L+ L I  G+   K       L L           + +        H  
Sbjct: 205 DTGVDGIKLHPLHIVDGSTMAKAWRAGRLLSLELTEYVEKAGEMIRHTPKNIIYHRI 261


>gi|196247551|ref|ZP_03146253.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. G11MC16]
 gi|229890686|sp|A4IMH7|MIAB_GEOTN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|196212335|gb|EDY07092.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. G11MC16]
          Length = 523

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 82/232 (35%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     +Q +RQL           G    +     
Sbjct: 235 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRQLAAQGYKEITLLGQNVNAYGKDF 288

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                  + D + +   +         ++P   +    +   K G  V  I L VQS   
Sbjct: 289 NDIQYG-LGDLMDELRKIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQSGST 347

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L        D
Sbjct: 348 EILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSLYREVEFD 407

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +  +  +GT   KM+ +  + +  E +      L Q I +   +  YE
Sbjct: 408 SAYTFIYSPREGTPAAKMNDNVPMEVKKERLQRLN-ALVQEIAAK-KMKQYE 457


>gi|224008074|ref|XP_002292996.1| histone acetyltransferase gcn5-type hat [Thalassiosira pseudonana
           CCMP1335]
 gi|220971122|gb|EED89457.1| histone acetyltransferase gcn5-type hat [Thalassiosira pseudonana
           CCMP1335]
          Length = 552

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 82/249 (32%), Gaps = 48/249 (19%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+     Q    
Sbjct: 91  CPHIAMTGGVCVYCPGGPDSDFEYSTQAYTGYEPTSMRAIRARYDPYSQTRGRVAQLRGL 150

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVS-------------SN 105
                 +  I  GG   + +          I  + D ++ + + S               
Sbjct: 151 GHSVDKVEFIVMGG---TFMSLDKSYKDYFIRNLHDALSGHKSSSVEEAVKYSEHSTIKC 207

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + ITIE  P      +       G  RI +GVQS+ E   R   R H  S    + HLA+
Sbjct: 208 IGITIETRPDYCLKPHLSEMLGYGCTRIEIGVQSIYESVARETNRGHTVSAVANSFHLAK 267

Query: 166 NIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++   ++  LP   + +      E     ++  D L LY   + +GT  Y++ K G
Sbjct: 268 DCGFKVVTHMMPDLPNTGLERDLTGFSEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTG 327

Query: 223 DLVLPSENV 231
                + + 
Sbjct: 328 RYQNYTPDQ 336


>gi|320450914|ref|YP_004203010.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thermus scotoductus
           SA-01]
 gi|320151083|gb|ADW22461.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thermus scotoductus
           SA-01]
          Length = 440

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 77/236 (32%), Gaps = 27/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C YC                    L E++ +++       L G    S      G 
Sbjct: 148 CNHHCTYC---IVPTTRGPEVSRHPDLILKEIETLKKAGVVEVTLLGQNVNSYGKDQPGF 204

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNR-ISLGVQ 138
           PS    + + ++                 + ++P +   +  +   +   + R I L VQ
Sbjct: 205 PSF--AELLRMVGQMGIPRVRF-------LTSHPVNFTDDIIEAIAETPAITRYIHLPVQ 255

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ LR + R +  ++ +  I   R I P   +S D+I   P +T   ++  L     
Sbjct: 256 SGSDRVLRRMAREYRRAQYLERIRRIREILPDAVLSTDIIVGFPGETEEDFQETLSLYDE 315

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              D   ++  +   GT  YK  +     LP E     L  L +           E
Sbjct: 316 VGYDQAYMFIYSPRPGTPAYKHFQ----DLPREVKVERLQRLIEKQKEWSYRRNLE 367


>gi|148263437|ref|YP_001230143.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146396937|gb|ABQ25570.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 556

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 67/189 (35%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S +   +  +    ++ + E++ +R   G   +        T ++    
Sbjct: 198 CPAVCVFCS--SPLFWGRSLRLRSPRAVVDEIRMIRDRYG---LIYFSIRDDTFTV---- 248

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +++          ++    ++  ++V+       +++G   I  GV+S   + L+ 
Sbjct: 249 DKGRVMEFCRLLQEEKVHILWNCQSRVNAVDEEMLLVMKRSGCECIQFGVESGSPRVLKA 308

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+     E   A    R     +S  LI  +  +T    +  ++   S       +  L
Sbjct: 309 LGKRITTEEVRRAAAAVRLAGIHLSIYLITGVADETDEDLKASIRLIESIRPHDGQVSPL 368

Query: 208 TIEKGTLFY 216
               GT  +
Sbjct: 369 AYYPGTALF 377


>gi|300087838|ref|YP_003758360.1| histone acetyltransferase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527571|gb|ADJ26039.1| Histone acetyltransferase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 471

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 64/349 (18%), Positives = 111/349 (31%), Gaps = 43/349 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE-----------NFIQSFLTEMQWMRQLTGPR-SISSIF 75
           C  +C YC   S + R                 + ++     ++ +  +  P   +  I 
Sbjct: 23  CPGECVYCPEFSGIPRSYTPHSPAVMRAASRNYDAVEQVKLRLKILEDMGHPTDKVELII 82

Query: 76  FGGGTPSLIEPQNIALI--------------LDGIAKNWTVSSN--VEITIEANPSSVEV 119
            GG   S         I              L+   +N  ++ +  V + IE  P     
Sbjct: 83  MGGTFLSNPPDVQTDYIKDCYDALNGSSSGSLEEAQQNNELAEHRAVGLCIETRPDYCGQ 142

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                    G  R+ LGVQ  +++    + R H+    + A    R    ++ +  +  L
Sbjct: 143 VEIARMINWGTTRVELGVQMPDDRVYEQVKRGHDVVAVVEATRRLRTAGLKVHYHWMPGL 202

Query: 180 PKQ-TMTQWEME--LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           P   T     +   +     +  D L LY   + +GT   + ++ G     S+ + V L 
Sbjct: 203 PGSNTENDLRLTKMIFDNPDFRPDGLKLYPTMVVEGTELDEWYRSGRYRPYSDGMMVRLI 262

Query: 237 NLTQSITSAHGLHA---YEISNHSFLG--AESLHNLNYWRYGDYIGIGPGAHSRVKVGSH 291
              + +   +   +    +I      G    SL +       D      GA  R      
Sbjct: 263 ADIKKLIPPYVRISRVLRDIPAEYINGGLKNSLRDKVRQLLEDE-----GAECRCVRCRE 317

Query: 292 RVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLRE 339
               S  K      ++ R +  A    E FLS E   +E L   LRLR 
Sbjct: 318 YGHRSNRKLAIGTPELRRLDYEAAGGHEVFLSLEDD-NETLFGLLRLRF 365


>gi|189426106|ref|YP_001953283.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422365|gb|ACD96763.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 518

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S     +  +     S   EM ++R   G   +  +     T +     
Sbjct: 198 CPAACSFCA--SPAFWGRRVRYRSAHSVAEEMLYLRDHYG---LLYLSLRDDTFT----A 248

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    ++   +      N+    ++   +++       R+AG   + LGV+S     L+ 
Sbjct: 249 DRRRTVELCRELIERRVNIFWNCQSRVEAIDCETLAWMRRAGCECVQLGVESGSSAMLKL 308

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+     + + A  L R    ++S  LI  +P+++    +  +        D L +  L
Sbjct: 309 LGKRITPEQVVEAADLIRQSGMQLSVYLITGIPEESDADRQQTINLIKRIQPDDLQVAPL 368

Query: 208 TIEKGTLFY 216
               GT  +
Sbjct: 369 AYYPGTALF 377


>gi|255655427|ref|ZP_05400836.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-23m63]
          Length = 311

 Score = 76.1 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 51  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   V ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 104 ---LEVLKEKYETILELEDVVGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 160

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 161 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMDVDGI 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 221 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 268


>gi|332528141|ref|ZP_08404172.1| YhcC [Rubrivivax benzoatilyticus JA2]
 gi|332112712|gb|EGJ12505.1| YhcC [Rubrivivax benzoatilyticus JA2]
          Length = 303

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 73/218 (33%), Gaps = 21/218 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   S                  ++   R      +    +F   
Sbjct: 33  CPNRDGTLGRGGCTFCSVLSFAADDGDAP------LARQLADRRAELKRAARYIAYFQAY 86

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SL 135
           T +  E + +  +      +  V   V + +   P  V         GYR+ G      L
Sbjct: 87  TNTYAEVETLTRLYAEATASPDV---VGLAVGTRPDCVPDAVLALLAGYRERGYEVWLEL 143

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L  + R H  +    A+  AR     +   LI  LP +T       L+R L
Sbjct: 144 GLQSAHDETLARVNRGHGWAAYADAVARARAAGVPVCTHLILGLPGETDAHAFTTLERVL 203

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
               + L L+ L I +G+     HK G++  P      
Sbjct: 204 DAGAEGLKLHPLMITRGSRLAVAHKRGEIAPPELPAYA 241


>gi|297526282|ref|YP_003668306.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
 gi|297255198|gb|ADI31407.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
          Length = 450

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 72/219 (32%), Gaps = 17/219 (7%)

Query: 28  CVKKCPYC------DFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC       F    R      E     ++  + +++++   +    + ++    
Sbjct: 181 CPYGCKYCQVSYMHGFFMRHRSIDNIVEYTGCMVEKNIRDIRFISPDSLAYGLKTMSRE- 239

Query: 79  GTPSL-IEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNR-ISL 135
             P L +  + ++ +     +             E  P  +  +  +  RK   N+ I L
Sbjct: 240 --PRLDLIEELLSRLYKKYVERKGARIFYGSFPSEVRPEHLTRDAARILRKYVANKNIIL 297

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G Q+  ++ L+ +GR H+  +   A+  A       + D I  LP +T       ++   
Sbjct: 298 GAQTGSDRLLKLIGRKHSIEDVYNAVENAVKYGFIPNVDYIIGLPGETRDDLYETIRSIK 357

Query: 196 SY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
                   + L+      G+ +  M          + + 
Sbjct: 358 KLVSMGARIHLHVFLPLPGSPYAWMPPGKVPSWVRKELM 396


>gi|262404694|ref|ZP_06081249.1| hypothetical protein VOA_002692 [Vibrio sp. RC586]
 gi|262349726|gb|EEY98864.1| hypothetical protein VOA_002692 [Vibrio sp. RC586]
          Length = 312

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        Q         +++              +F   T +      + +
Sbjct: 45  CTFCNVASFANEESQQQSI-----QEQLKDRAGEIKRAKKYLAYFQAYTSTY---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +        G      LG+Q+  + +L+ 
Sbjct: 97  LKSMYEQALEEADIVGLCVGTRPDCVPDAVLELLADYVQQGYEIWLELGLQTAHDHTLKR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +        AR +  ++   LI  LP +        LQ+ LS   D + L+ L
Sbjct: 157 INRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRCDNLATLQQVLSVGTDGIKLHGL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
            I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 217 HIVEGSTMAKAWRAGRLTVLEQDEYVSIACEMIRSTPPQIIYHR 260


>gi|242309926|ref|ZP_04809081.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523223|gb|EEQ63089.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 317

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 8/161 (4%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           +     +   + + V ++I     SV +       +    +     I  G+QS+ +++L+
Sbjct: 116 LQKLYTEALNLPNVVGMSIGTRTDSVNLELLDYLAELQKIKGQEIWIEYGIQSVYDETLK 175

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H   E    I   +    ++   +IY LP +T       L + L +  D + ++ 
Sbjct: 176 LINRGHGTEEMEYWISQTKQRGLKVCSHIIYGLPNETKEMMLHSLNKVLEWGSDGIKVHP 235

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L I + T+   MHK G+      N   D   L         
Sbjct: 236 LYIIEKTILALMHKKGEYKPIPLN---DYIELIVESLKIIP 273


>gi|52857642|gb|AAU89074.1| histone acetyltransferase Elp3 [Giardia intestinalis]
          Length = 454

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 3/152 (1%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +TIE  P   E  +     + G  R+ +GVQS+ +     + R H     I     +
Sbjct: 86  CVALTIETRPDYCEPRHLADMLRYGTTRLEIGVQSVYDDVCGDINRGHTVRSVIRCFGQS 145

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   +M   ++  LP  +  +      EL ++ +Y  D L +Y   I +GT  Y+  + 
Sbjct: 146 KDAGFKMIAHMMPNLPFTSTFRDIFGFQELFQSTNYRPDGLKIYPTLIIRGTELYERWRL 205

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +       +        + +   +  Y I
Sbjct: 206 NKYLRNLPTHKLIYLLTIIYVLAPPWVRIYRI 237


>gi|220903451|ref|YP_002478763.1| hypothetical protein Ddes_0165 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219867750|gb|ACL48085.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 347

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 84/251 (33%), Gaps = 53/251 (21%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +        C +C  N+      +G   F   + +   ++  R     R+  + +  
Sbjct: 30  CPNRDGSLSHRGCTFC--NASGSGSGLGVRGFSLEEQWRAWLEKYRATDADRAFMA-YLQ 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----- 132
             + +   P+ + L+L  +A    +   + + +   P  +  +         +N      
Sbjct: 87  SYSNTYGPPERLQLLLQQVAA---LPGCLGVAVGTRPDCLGPHKLDMLAACRINASGNGP 143

Query: 133 --------------------------------ISLGVQSLEEQSLRFLGRNHNASEAIAA 160
                                           + LG+QS    +LR + R H+ + +  A
Sbjct: 144 DGVHHYTRNAHGDNGYKKGAGGMENGGLSEVWLELGLQSAHNATLRRINRGHDTACSETA 203

Query: 161 IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +  A      +   L+  LP +    +   L  ALS  +  L L+ + + +GT   ++++
Sbjct: 204 VRQAAERGLAVCGHLMAGLPGEDEAAFLESLDWALSLPLSGLKLHNVYVPRGTSLARLYE 263

Query: 221 DGDLVLPSENV 231
           +G     + + 
Sbjct: 264 EGGYHPLARDE 274


>gi|281411734|ref|YP_003345813.1| hypothetical protein Tnap_0295 [Thermotoga naphthophila RKU-10]
 gi|281372837|gb|ADA66399.1| conserved hypothetical protein [Thermotoga naphthophila RKU-10]
          Length = 303

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 94/244 (38%), Gaps = 17/244 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YCD  +    +       I+  + EM+   +  G +   + +F   
Sbjct: 29  CPNRDGTKGKGGCIYCD--ATGSGFTTLMRLPIREQVMEMKKKYEKRGIKKFIA-YFQSF 85

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLG 136
           + +    + +    +   +     S V++++   P  V     + F+ ++K     + LG
Sbjct: 86  SNTYAPVEVLR---ERYEEALVDDSIVQLSVSTRPDLVPERVLDLFEEFKKRVDVSVELG 142

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   ++L+ + R H  +E + A    +     +   +I  LP   M       +   +
Sbjct: 143 LQTANYRTLKKINRGHTLAEFVDAAVRVKKRGIELVVHVILNLPWDDMEDVVETAKILSA 202

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             VD + L+ L + +GT   +M+K G++ + S    +D         S + +    +++ 
Sbjct: 203 LDVDGVKLHSLYVVEGTKLAEMYKKGEIKICSLEEYIDRAITFLEYLSPNVVIHRLVADP 262

Query: 257 SFLG 260
              G
Sbjct: 263 PRKG 266


>gi|153807480|ref|ZP_01960148.1| hypothetical protein BACCAC_01760 [Bacteroides caccae ATCC 43185]
 gi|149129842|gb|EDM21054.1| hypothetical protein BACCAC_01760 [Bacteroides caccae ATCC 43185]
          Length = 326

 Score = 76.1 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 65/217 (29%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  + + L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKSVTAQLEEGKCFFARKYPEMKYLAYFQAYTNTY---AELEG 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +        +   K     +  G++S  +++L+ +
Sbjct: 103 LKRKYEEALEVEDVVGLVIGTRPDCMPERLLRYLEELNKHAFLMVEYGIESTCDRTLQRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   + +  +         +   +I  LP +T      +        +  L ++QL 
Sbjct: 163 NRGHTYEDTVETVGRTAACGILVGGHIILGLPGETSDAMVAQAGILSDLPLSTLKIHQLQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     +              +  +L       
Sbjct: 223 LIRGTRMAHEYDINPADFHLFTEVNEYIDLVIDYVEH 259


>gi|296451419|ref|ZP_06893156.1| radical SAM protein [Clostridium difficile NAP08]
 gi|296880232|ref|ZP_06904198.1| radical SAM protein [Clostridium difficile NAP07]
 gi|296259686|gb|EFH06544.1| radical SAM protein [Clostridium difficile NAP08]
 gi|296428821|gb|EFH14702.1| radical SAM protein [Clostridium difficile NAP07]
          Length = 314

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 54  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 106

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   V ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 107 ---LEVLKEKYETILELEDVVGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 163

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 164 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMDVDGI 223

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 224 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 271


>gi|301123783|ref|XP_002909618.1| elongator complex protein 3 [Phytophthora infestans T30-4]
 gi|262100380|gb|EEY58432.1| elongator complex protein 3 [Phytophthora infestans T30-4]
          Length = 541

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 121/364 (33%), Gaps = 59/364 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   +  +Q+     Q  R 
Sbjct: 94  CPHIAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPALQTRHRVAQLKRL 153

Query: 65  LTGPRSISSIFFGGGTPSLIE---PQNIALILDGIAKNWTVSSN-------------VEI 108
                 +  I  GG   SL        I  + D ++ + + S +               I
Sbjct: 154 GHSVDKVEFIVMGGTFLSLDSRYRDYFIRSLHDALSGHSSTSVDEAVRYSEQSSTKCTAI 213

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  RI +GVQS+ E   R   R H  +       LA++  
Sbjct: 214 TIETRPDYCLKPHLHDMLRYGCTRIEIGVQSVYEDVARDTNRGHTVAAVSHCFQLAKDCG 273

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   L+  LP   M +      E      +  D + LY   + +GT  Y++ K G   
Sbjct: 274 FKIVAHLMPDLPNMGMERDLAGFREFFENPRFRSDGIKLYPTLVIRGTGLYELWKTGTYK 333

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYWRYGDYI 276
             S    V   +L   + +        Y +          S +   +L  L   R  D +
Sbjct: 334 NYSPEDLV---DLMARLLALVPPWTRVYRVQRDIPMPLVTSGVEHGNLRELALARMRD-L 389

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
           G+        +VG   +           +++VR++  A    E FLS E      L+  L
Sbjct: 390 GLVCNDVRTREVGIKGIHDQSVPDQ---VELVRRDYVANGGWETFLSYEDPQQNILIGLL 446

Query: 336 RLRE 339
           RLR+
Sbjct: 447 RLRQ 450


>gi|15642368|ref|NP_232001.1| hypothetical protein VC2371 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121588209|ref|ZP_01677953.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727483|ref|ZP_01680601.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675264|ref|YP_001217874.1| hypothetical protein VC0395_A1950 [Vibrio cholerae O395]
 gi|153819126|ref|ZP_01971793.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822760|ref|ZP_01975427.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227082495|ref|YP_002811046.1| hypothetical protein VCM66_2294 [Vibrio cholerae M66-2]
 gi|229507563|ref|ZP_04397068.1| hypothetical protein VCF_002792 [Vibrio cholerae BX 330286]
 gi|229512241|ref|ZP_04401720.1| hypothetical protein VCE_003653 [Vibrio cholerae B33]
 gi|229519377|ref|ZP_04408820.1| hypothetical protein VCC_003407 [Vibrio cholerae RC9]
 gi|229607069|ref|YP_002877717.1| hypothetical protein VCD_001978 [Vibrio cholerae MJ-1236]
 gi|254849493|ref|ZP_05238843.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298500267|ref|ZP_07010072.1| radical SAM protein [Vibrio cholerae MAK 757]
 gi|9656941|gb|AAF95514.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547551|gb|EAX57654.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630151|gb|EAX62553.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126510316|gb|EAZ72910.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519705|gb|EAZ76928.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317147|gb|ABQ21686.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227010383|gb|ACP06595.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014266|gb|ACP10476.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229344066|gb|EEO09041.1| hypothetical protein VCC_003407 [Vibrio cholerae RC9]
 gi|229352206|gb|EEO17147.1| hypothetical protein VCE_003653 [Vibrio cholerae B33]
 gi|229355068|gb|EEO19989.1| hypothetical protein VCF_002792 [Vibrio cholerae BX 330286]
 gi|229369724|gb|ACQ60147.1| hypothetical protein VCD_001978 [Vibrio cholerae MJ-1236]
 gi|254845198|gb|EET23612.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297540960|gb|EFH77014.1| radical SAM protein [Vibrio cholerae MAK 757]
          Length = 316

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        Q     S   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFADENTQQQ-----SIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|138894823|ref|YP_001125276.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266336|gb|ABO66531.1| tRNA 2-methylthioadenosine synthase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 580

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 82/232 (35%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     +Q +RQL           G    +     
Sbjct: 292 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRQLAAQGYKEITLLGQNVNAYGKDF 345

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                  + D + +   +         ++P   +    +   K G  V  I L VQS   
Sbjct: 346 NDIQYG-LGDLMDELRKIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQSGST 404

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L        D
Sbjct: 405 EILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSLYREVEFD 464

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +  +  +GT   KM+ +  + +  E +      L Q I +   +  YE
Sbjct: 465 SAYTFIYSPREGTPAAKMNDNVPMEVKKERLQRLN-ALVQEIAAK-KMKQYE 514


>gi|328955192|ref|YP_004372525.1| Histone acetyltransferase [Coriobacterium glomerans PW2]
 gi|328455516|gb|AEB06710.1| Histone acetyltransferase [Coriobacterium glomerans PW2]
          Length = 614

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 3/131 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P +V   + +  R+ G  ++ +G+QSL++  L   GR         A  L R
Sbjct: 287 VGLVIETRPDAVTAESLRLLRRLGCTKVQMGIQSLDQGILDANGRGITVDRIERACSLLR 346

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               +     +  L   T  +   + +R +   ++  D + LY   + +G      + DG
Sbjct: 347 LFGFKTHVHFMVNLMGATPERDRRDYERLVGDPAFLPDEVKLYPCVLVQGARLASCYADG 406

Query: 223 DLVLPSENVAV 233
                +E+  +
Sbjct: 407 SWRPYTEDELI 417


>gi|315048317|ref|XP_003173533.1| elongator complex protein 3 [Arthroderma gypseum CBS 118893]
 gi|311341500|gb|EFR00703.1| elongator complex protein 3 [Arthroderma gypseum CBS 118893]
          Length = 576

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 127/383 (33%), Gaps = 56/383 (14%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 176

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +  +     I+ + + ++   T + +             V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPVEYRETFISQLHNALSGYQTDNVDEAVQAGEMSNIKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 237 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E      +  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 357 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 412

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 413 GTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 471

Query: 338 REGISVKDWE-MLAGRNLDIECE 359
           R+  S   +   L G+   +  E
Sbjct: 472 RKCSSKYTFRPELTGQPTSLVRE 494


>gi|322368924|ref|ZP_08043491.1| histone acetyltransferase, ELP3 family protein [Haladaptatus
           paucihalophilus DX253]
 gi|320551655|gb|EFW93302.1| histone acetyltransferase, ELP3 family protein [Haladaptatus
           paucihalophilus DX253]
          Length = 553

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 82/236 (34%), Gaps = 11/236 (4%)

Query: 39  SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK 98
           +   R    QE F++  L  M        P       F    P   +      + D IA+
Sbjct: 164 TMTARSHDYQEWFVKRALEAMNDYDVDKEPEPAEGESF-AQNP---DEYEFKYLEDVIAE 219

Query: 99  NWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEA 157
           N T    N+  T E  P   +        + G  ++ +GVQ+  E+  R + R H A  +
Sbjct: 220 NETGDIRNIGTTFETKPDWCDPEQINRMLELGGTKVEVGVQTTFERINREMHRGHGAQAS 279

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTL 214
           I A    R+   ++ F ++   P  +      + +R      +  D+L +Y   + +GT 
Sbjct: 280 IEANQRLRDSAFKVGFHMMPGQPGMSKEMCVEDFRRIFEDEKWKPDYLKIYPTLVVRGTA 339

Query: 215 FYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL 267
            Y     G+        A +L    +S+   +        +I      G     NL
Sbjct: 340 TYDWWYKGEYEPLRNEEAAELVAEIKSMIPKYVRLQRVQRDIPADFIDGGVWKSNL 395


>gi|239904868|ref|YP_002951606.1| hypothetical protein DMR_02290 [Desulfovibrio magneticus RS-1]
 gi|239794731|dbj|BAH73720.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 364

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 2/215 (0%)

Query: 20  GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            VY+ +  C  +C +C  +       V     + +    +    +    R    + F GG
Sbjct: 39  PVYISFQGCPGRCVFCAQSVQAGAPPVSLGETLAAMEGGLAQAAR--DGRGPYELAFYGG 96

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             + +        L+   +         I     P +            G++ + +G Q+
Sbjct: 97  VFTALPEPWPRRFLEAALRFRRAGLIGRIRCSTRPDACPPGLLAELAGLGLDLVEIGAQT 156

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++  L   GR H+A     A    R     +   L+  LP+        ++    + A 
Sbjct: 157 FDDAVLIASGRGHDAQATRRAARAVRAAGLDLGLQLLPGLPRHDPAALARDVAETCALAP 216

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             + ++   + +GT    +++ G  V       +D
Sbjct: 217 SLVRIHPCLVVEGTALADLYRAGRHVPWPLEATID 251


>gi|229524363|ref|ZP_04413768.1| hypothetical protein VCA_001953 [Vibrio cholerae bv. albensis
           VL426]
 gi|229337944|gb|EEO02961.1| hypothetical protein VCA_001953 [Vibrio cholerae bv. albensis
           VL426]
          Length = 316

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        Q     S   +++              +F   
Sbjct: 37  CPNRDGTIGRGGCTFCNVASFADENTQQQ-----SIQAQLKDRAGEIKRAKKYLAYFQAY 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 92  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 148

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 149 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEGRTENLTTLQQVL 208

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 209 RVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 264


>gi|304384143|ref|ZP_07366596.1| radical SAM protein [Prevotella marshii DSM 16973]
 gi|304334770|gb|EFM01047.1| radical SAM protein [Prevotella marshii DSM 16973]
          Length = 318

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 7/219 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD N         +   I+  LT  +       P      +F   T +    + +  
Sbjct: 53  CSYCD-NRTFNPDYCHRGVTIREQLTAGKAFFARKYPDMKYLAYFQAYTNTYASVETLKR 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +   +   V   V I I   P  +  +     +   +     +  G++SL + +L  +
Sbjct: 112 MYE---EALGVEDVVGIVIGTRPDCMSDDLLDYLETLHRQTFMIVEYGIESLNDNTLVRI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R HN + ++ AI             +I  LP++   +   +     S  +D L ++Q+ 
Sbjct: 169 NRGHNVACSLHAIERTAERGITTGAHVILGLPEEDFDEHIRQATLLSSTRLDVLKVHQMQ 228

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           I KGT   + +      + S +  + L            
Sbjct: 229 IIKGTRLAREYAKQPFPVYSADEYIRLITEYIQYLRPTM 267


>gi|255746950|ref|ZP_05420895.1| hypothetical protein VCH_003349 [Vibrio cholera CIRS 101]
 gi|262161506|ref|ZP_06030616.1| hypothetical protein VIG_002758 [Vibrio cholerae INDRE 91/1]
 gi|262168358|ref|ZP_06036055.1| hypothetical protein VIJ_001541 [Vibrio cholerae RC27]
 gi|255735352|gb|EET90752.1| hypothetical protein VCH_003349 [Vibrio cholera CIRS 101]
 gi|262023250|gb|EEY41954.1| hypothetical protein VIJ_001541 [Vibrio cholerae RC27]
 gi|262028817|gb|EEY47471.1| hypothetical protein VIG_002758 [Vibrio cholerae INDRE 91/1]
          Length = 312

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S        Q     S   +++              +F   
Sbjct: 33  CPNRDGTIGRGGCTFCNVASFADENTQQQ-----SIQAQLKDRAGEIKRAKKYLAYFQAY 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SL 135
           T +      + ++     +    +  V + +   P  V     +        G      L
Sbjct: 88  TSTY---AEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q+  +Q+L+ + R H+ +        AR +  ++   LI  LP +  T+    LQ+ L
Sbjct: 145 GLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQQVL 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGLHA 250
               D + L+ L I +G+   K  + G L +  ++  V +   + +S       H 
Sbjct: 205 KVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMIRSTPPEIVYHR 260


>gi|317055033|ref|YP_004103500.1| hypothetical protein Rumal_0309 [Ruminococcus albus 7]
 gi|315447302|gb|ADU20866.1| conserved hypothetical protein [Ruminococcus albus 7]
          Length = 311

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 75/203 (36%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        +       I+   ++++ + +     ++   +F  G+ +     +I +
Sbjct: 52  CAFCS-ARMSGNFAGDPRRSIEEQYSQVRTIMEKKWADALCIPYFQAGSNTY---ADIGV 107

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +  +    + + V ++I      ++           K     + LG+Q++ + +   +
Sbjct: 108 LREMFSAALELDNAVGLSIATRADCIDREKAEMLGALAKRTYLTVELGLQTIFDSTAIAM 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A  L R     +   LI  LP +T               +  + L+ L 
Sbjct: 168 NRCHTYNDLLEAYELLRAEDVNVCIHLINGLPGETPDMMRRSAYTIGQLDIHAVKLHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + KGT    M++ GDL     + 
Sbjct: 228 VLKGTSLADMYERGDLRTLERDE 250


>gi|27467889|ref|NP_764526.1| hypothetical protein SE0971 [Staphylococcus epidermidis ATCC 12228]
 gi|57866805|ref|YP_188442.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
           RP62A]
 gi|251810724|ref|ZP_04825197.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876275|ref|ZP_06285142.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis SK135]
 gi|293366743|ref|ZP_06613419.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|81674874|sp|Q5HPP8|MIAB_STAEQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81843816|sp|Q8CSS3|MIAB_STAES RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|27315434|gb|AAO04568.1|AE016747_65 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637463|gb|AAW54251.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
           RP62A]
 gi|251805884|gb|EES58541.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295300|gb|EFA87827.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis SK135]
 gi|291319044|gb|EFE59414.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329728030|gb|EGG64474.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis VCU144]
 gi|329736630|gb|EGG72896.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis VCU045]
          Length = 514

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 79/231 (34%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +R+L           G    S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDI 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           + +   + D +     +         ++P        +   K G  V  I L VQS   Q
Sbjct: 277 EGLDYELGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNQ 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L        +H
Sbjct: 337 VLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDDVQFEH 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              Y  +   GT   KM  +  L +  E +      +   I S   +  YE
Sbjct: 397 AYTYLYSQRDGTPAAKMKDNVPLEVKKERLQRLNKKVG--IYSQQAMSQYE 445


>gi|312144140|ref|YP_003995586.1| hypothetical protein Halsa_1814 [Halanaerobium sp. 'sapolanicus']
 gi|311904791|gb|ADQ15232.1| conserved hypothetical protein [Halanaerobium sp. 'sapolanicus']
          Length = 317

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 82/227 (36%), Gaps = 23/227 (10%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFL---TEMQWMRQLTGPRSISSI--FFGGGTPSLIEP 86
           C +C             E   +S       ++  + +     + +   +F   + + +  
Sbjct: 43  CFFCG------EEGADFEMLPESMSVKNQLLENKKYIGERYGVDNFIAYFQNFSNTYLPL 96

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS--------LGVQ 138
             +   L    +   V +   +     P S+     +  +K  +N IS         G+Q
Sbjct: 97  DQLIKYLK---EACEVEAIAAVYFSTRPDSISEKYIRVLKKT-LNEISPEIKLAFEFGLQ 152

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  ++L  + R H  +E I A+  A+     +   LI  LP  +    +   +   +  
Sbjct: 153 TVNYKTLEKVNRKHGLAEFIDAVITAKKYQAEVGAHLILNLPGDSRLDVKEGARIISALK 212

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +DH+ L+ L I + ++  + + + ++ L S    ++   L     S 
Sbjct: 213 LDHVKLHALYIRENSVMGEKYHNVEIELCSLEEYIERVILFLENLSP 259


>gi|162452471|ref|YP_001614838.1| putative Fe-S oxidoreductase [Sorangium cellulosum 'So ce 56']
 gi|161163053|emb|CAN94358.1| putative Fe-S oxidoreductase [Sorangium cellulosum 'So ce 56']
          Length = 609

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 60/186 (32%), Gaps = 9/186 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     +  +   +   L  ++          +  +     T +     
Sbjct: 207 CAWACTFCG--AEATWGRGFRGQSVPYVLDSIEAA---VAKLPVKMVQIKDDTFTT---- 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +++          +   + +     +     +  R AG  R+SLGV+S     L+ 
Sbjct: 258 NRKRVIEICRGIRDRKISFLWSCDTRVDVLGEELLREMRLAGCQRLSLGVESGSPSILKN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     + I +  LA+    ++ + ++     +T   +   L    +          L
Sbjct: 318 IDKKITVKKIIESTELAKKYGIQVRYYMMLGNRGETAETFRETLAFLEAARPHQYIFSCL 377

Query: 208 TIEKGT 213
           +I  GT
Sbjct: 378 SIYPGT 383


>gi|301165856|emb|CBW25429.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 433

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 71/198 (35%), Gaps = 10/198 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEPQNI 89
           C Y C F          +   I   L   + + +      + + +  G    S    + +
Sbjct: 155 CNYVCSFCIIPFARGRSKAISINGALENAKKLIEDGFKEIVLTGVNIGEYETS--SGEKL 212

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQSLRF 147
             ++  +     +      ++E  P+++     + ++ +    +   + +QS +++ L+ 
Sbjct: 213 TDMVKALLDLEGLERLRLSSVE--PNTITDELLEVFKSSPKFKDHFHIPLQSGDDEILKN 270

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +  ++    I+     FP   +  D+I   P +T  Q+E          + H  ++
Sbjct: 271 MRRKYTVADYKKVINKIITAFPNAGIGADIICGFPGETKEQFENTYNLVKELPITHFHVF 330

Query: 206 QLTIEKGTLFYKMHKDGD 223
             +  KGT   +M     
Sbjct: 331 PYSKRKGTTAGRMDNHIH 348


>gi|42523558|ref|NP_968938.1| hypothetical protein Bd2086 [Bdellovibrio bacteriovorus HD100]
 gi|81617194|sp|Q6MLC6|MIAB_BDEBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|39575764|emb|CAE79931.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 453

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 92/279 (32%), Gaps = 35/279 (12%)

Query: 22  YVHWPFCVKK-C-PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GG 78
           YV+      K C  +C F          +   +Q  LT+++ + +    R +  +   G 
Sbjct: 167 YVNI----TKGCDNFCTFCVVPYTRGREKSRPVQHILTDIRHLVK----RGVKEVTLLGQ 218

Query: 79  GTPSLIEPQNIA--LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRI 133
              S    + I    +L  +AK   V      T  ++P            +     +  I
Sbjct: 219 NVNSYQGDEGIDFADLLAKVAKETDVERIRYTT--SHPKDFNQKLVDVMAEHSNKIMEYI 276

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L  Q+   + L  + RN+   E +  I + +   P + F  D+I   P +T   ++  L
Sbjct: 277 HLPFQAGSTKVLERMNRNYTREEYLERIAMIQKGLPNVCFSTDIIVGFPGETEEDFQDTL 336

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   + +  +  +    T   K   +  L    +N  ++         +   +  Y
Sbjct: 337 NMVTEVGFETIFAFSYSPRPFTKAAK--FEDQLPEDVKNERLNRLFDVHEAMAFERVKRY 394

Query: 252 EIS-----------NHSFLGAESLHN--LNYWRYGDYIG 277
           E +           +H  +   S  N  +++    D IG
Sbjct: 395 EGTTMKVLVENVDRDHGKMQGRSTGNKLVHFLGTADLIG 433


>gi|218459793|ref|ZP_03499884.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 66

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 30/47 (63%)

Query: 11 MTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLT 57
          +   G    GVYVHWPFC  KCPYCDFNSHVR   V QE F  +FL 
Sbjct: 16 LPDTGEPGFGVYVHWPFCAAKCPYCDFNSHVRHQPVDQERFAAAFLK 62


>gi|14590686|ref|NP_142754.1| methyltransferase [Pyrococcus horikoshii OT3]
 gi|6686119|sp|O58549|Y819_PYRHO RecName: Full=Uncharacterized methyltransferase PH0819
 gi|3257229|dbj|BAA29912.1| 459aa long hypothetical methyltransferase [Pyrococcus horikoshii
           OT3]
          Length = 459

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 20/249 (8%)

Query: 25  WPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF        C   C +C         + G+     S    ++ +  L     I  I F
Sbjct: 191 VPFGVVMTSRGCPFNCVFCS-----SSLQFGKRWRGHSVERVIEELSILHYEYGIKEIEF 245

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              T +L + + I + L    +   +S        +  ++      +  ++ G + +  G
Sbjct: 246 LDDTFTLNKKRAIDISLRIKQEGLDISWTA----SSRVNTFNEKVAKAMKEGGCHTVYFG 301

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           ++S   + L F+G+     ++I A+  A+          I   P +T  + E  ++ A  
Sbjct: 302 IESASPRILEFIGKGITPQQSIDAVKTAKKFGLHALGSFIIGFPDETREEVEATIKFAKK 361

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +D+      T   GT  ++     +L+L         Y     +       + +IS  
Sbjct: 362 LDIDYAQFTIATPYPGTRLWEYAIANNLLLTMN---WRKYTTIDPVMKLKHFTSEQISKL 418

Query: 257 SFLGAESLH 265
                 S +
Sbjct: 419 LRKAYISFY 427


>gi|302897527|ref|XP_003047642.1| histone acetyltransferase [Nectria haematococca mpVI 77-13-4]
 gi|256728573|gb|EEU41929.1| histone acetyltransferase [Nectria haematococca mpVI 77-13-4]
          Length = 567

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 70/373 (18%), Positives = 120/373 (32%), Gaps = 59/373 (15%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 111 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 170

Query: 72  SSI------FFGGGTPSLIEP----QNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + IA + +     +   V   VE           I
Sbjct: 171 GHSVDKVEYIIMGGTFMSLPESYRNEFIAQLHNALSGYQTTNVDEAVEAGEMSNIKCVGI 230

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 231 TIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 290

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 291 YKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 350

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYI 276
             + N  +   +L   I +        Y +     +     G E  +L  L   R  D  
Sbjct: 351 NYTPNGLI---DLVARILALIPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKD-- 405

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGL 335
             G               I  +  P   +++VR++  A    E FL+ E    + L+  L
Sbjct: 406 -FGTTCRDVRTREVGVNEIKNKIRPNQ-IELVRRDYVANGGWETFLAYEDPKQDILVALL 463

Query: 336 RLREGISVKDWEM 348
           RLR+      +  
Sbjct: 464 RLRKCTEKYTYRE 476


>gi|225849364|ref|YP_002729528.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643388|gb|ACN98438.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 437

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C KKC YC            +   I   L E+Q++ +  G + I     G    +    +
Sbjct: 156 CDKKCTYC---IVPTTRGKERSRRIGDILREVQFLVE-DGVKEIH--LIGQNVTAYGKDL 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                  +L  +A    V      T   +P  ++ +  +           + L +Q+  +
Sbjct: 210 GDVKFWELLQAVASVPGVERIRFTT--GHPRDLDEDTIKVMADLPQVCEALHLPIQAGSD 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E +  I L +   P +  S D+I   P +T   +   ++       D
Sbjct: 268 KVLQAMDRGYTQKEYLQKIDLLKKYIPDIALSTDIIVGFPGETYEDYLETVKVIKEVEYD 327

Query: 201 HLSLYQLTIEKGTL 214
            +  ++ +   GT 
Sbjct: 328 QVFAFKYSPRPGTP 341


>gi|321264159|ref|XP_003196797.1| pol II transcription elongation factor [Cryptococcus gattii WM276]
 gi|317463274|gb|ADV25010.1| Pol II transcription elongation factor, putative [Cryptococcus
           gattii WM276]
          Length = 557

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 122/366 (33%), Gaps = 63/366 (17%)

Query: 28  CVK------KCPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   R +
Sbjct: 101 CPHVAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVNQLRDL 160

Query: 72  SS------IFFGGGTPSLIEPQNIALILDGIA------------KNWTVSS-----NVEI 108
                   I   GGT   +        + G+             +    S       V I
Sbjct: 161 GHSVDKVEIIIMGGTFMSMPEDYRHKFIAGLHNALSGHTGDDVDEAVKFSEQSKIKCVGI 220

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + H++++  
Sbjct: 221 TIETRPDYCLKPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMSKDAG 280

Query: 169 PRMSFDLIYALPKQTMTQ--WE-MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP     +  W+  E     ++  D L LY   + +GT  Y++ + G   
Sbjct: 281 YKIVAHMMPDLPNCGTERDIWQFQEFFENPAFRSDGLKLYPTLVIRGTGLYELWRTGKYK 340

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES-------LHNLNYWRYGDYIGI 278
               N  VD+     ++        Y +     +   S       L  L   R  D+   
Sbjct: 341 NYPPNALVDIVARIMALVPPWT-RVYRVQRDIPMPLVSSGVENGNLRELALARMKDF--- 396

Query: 279 GPGA----HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
             GA        +VG H +   +   P+  ++++R++  A    E FLS E    + L+ 
Sbjct: 397 --GAECRDVRYREVGLHEIHHRVR--PQD-IELIRRDYAANGGWETFLSYEDPQSDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|58260746|ref|XP_567783.1| Pol II transcription elongation factor [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117315|ref|XP_772884.1| hypothetical protein CNBK2550 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255502|gb|EAL18237.1| hypothetical protein CNBK2550 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229864|gb|AAW46266.1| Pol II transcription elongation factor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 557

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 120/366 (32%), Gaps = 63/366 (17%)

Query: 28  CVK------KCPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   R +
Sbjct: 101 CPHVAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVNQLRDL 160

Query: 72  SS------IFFGGGTPSLIEPQNIALILDGIA------------KNWTVSS-----NVEI 108
                   I   GGT   +        + G+             +    S       V I
Sbjct: 161 GHSVDKVEIIIMGGTFMSMPEDYRHKFIAGLHNALSGHTGEDVDEAVKFSEQSKVKCVGI 220

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H       + H++++  
Sbjct: 221 TIETRPDYCLKPHLSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMSKDAG 280

Query: 169 PRMSFDLIYALPKQTMTQ--WE-MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP     +  W+  E     ++  D L LY   + +GT  Y++ + G   
Sbjct: 281 YKIVAHMMPDLPNCGTERDIWQFQEFFENPAFRSDGLKLYPTLVIRGTGLYELWRTGKYK 340

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES-------LHNLNYWRYGDYIGI 278
               N  VD+     ++        Y +     +   S       L  L   R  D+   
Sbjct: 341 NYPPNALVDIVARIMALVPPWT-RVYRVQRDIPMPLVSSGVENGNLRELALARMKDF--- 396

Query: 279 GPGA----HSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
             GA        +VG H +   +       ++++R++  A    E FLS E    + L+ 
Sbjct: 397 --GAECRDVRYREVGLHEIHHRVRPRD---IELIRRDYAANGGWETFLSYEDPQSDILVG 451

Query: 334 GLRLRE 339
            LRLR+
Sbjct: 452 LLRLRK 457


>gi|325968646|ref|YP_004244838.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
 gi|323707849|gb|ADY01336.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 472

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 77/246 (31%), Gaps = 20/246 (8%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CPY C F S    +      + +S       +         + I F     +L       
Sbjct: 208 CPYGCSFCS-TSYFWGRMVRY-RSAKAVADEIEDAMNTYKTNIIVFTDDEFTL----GKR 261

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            + D + +      ++  +  +   +++       +  G   +  GV+S  ++++  +G+
Sbjct: 262 FVYDFLKELRERKLDINFSCGSRVDTIDKEMMTALKSHGCTALYFGVESGSQETINKIGK 321

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
                +A+     A+ I        +   P +++   +  ++ A+     +      T  
Sbjct: 322 RITLEQAVKVFQWAKEIGIDHVGSFVIGFPWESINDMKNTIKFAMKLNPTYAQFTVATPY 381

Query: 211 KGTLFYKMHKDGDLVLPSENVAV-----------DLYNLTQSITSAHGLHAYEISNHSFL 259
            GT  Y+   + +L+                         Q +     +  Y  S   FL
Sbjct: 382 PGTPLYQQALNDNLIEDWNWEHWTTLRAVMKGYRFTKEQAQKMLQWAYVKYY--SRLGFL 439

Query: 260 GAESLH 265
             E +H
Sbjct: 440 IHELIH 445


>gi|323331223|gb|EGA72641.1| Elp3p [Saccharomyces cerevisiae AWRI796]
          Length = 448

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 50/238 (21%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q+    ++ ++Q
Sbjct: 108 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQA-RGRVEQLKQ 166

Query: 65  LTGP-RSISSIFFGGGTPSLIE------PQNIALILDGI-------------AKNWTVSS 104
           L      +  +  GG   + +          I  + + +                 +++ 
Sbjct: 167 LGHSIDKVEYVLMGG---TFMSLPKEYREDFIVKLHNALSGFNGNDIDEAILYSQQSLTK 223

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     K G  R+ +GVQSL E   R   R H          ++
Sbjct: 224 CVGITIETRPDYCTQTHLDDMLKYGCTRLEIGVQSLYEDVARDTNRGHTVRSVCETFAVS 283

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
           ++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ 
Sbjct: 284 KDAGYKVVSHMMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIRGTGLYELW 341


>gi|160902226|ref|YP_001567807.1| putative radical SAM protein [Petrotoga mobilis SJ95]
 gi|160359870|gb|ABX31484.1| conserved hypothetical radical SAM protein [Petrotoga mobilis SJ95]
          Length = 304

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 86/250 (34%), Gaps = 29/250 (11%)

Query: 28  CVKK--------CPYCD-----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C  K        C YCD     F +   + KV  E  ++  +   +              
Sbjct: 30  CPNKTGERGKGGCIYCDLTGSGFAAF--KPKVSIEEQVKEMINRYEKKANKF------LA 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI- 133
           +F   T +      +  + +           V + +   P  V        +    +R+ 
Sbjct: 82  YFQANTNTYAP---VDELKEKYESALIDDRIVGLDVSTRPDCVPDEVITLLKTFK-DRVD 137

Query: 134 ---SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
               LGV+S    +L+++ R H+ +E I +++  +     +    I   P  T+   +  
Sbjct: 138 VYVELGVESTNPNTLKYMNRGHSLAEVIDSVNRLKKAELEVILHYIIDFPCDTLEDVKEM 197

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            + + +  VD + L+ L I + T    ++K G+ V  + +  V+             +  
Sbjct: 198 AKVSSALKVDGVKLHSLYIVENTKLADLYKSGEFVPLTLDDFVERAITFLEYLDPKIVIH 257

Query: 251 YEISNHSFLG 260
             +++   +G
Sbjct: 258 RLVADPPKIG 267


>gi|291166439|gb|EFE28485.1| radical SAM domain-containing protein [Filifactor alocis ATCC
           35896]
          Length = 311

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 86/251 (34%), Gaps = 11/251 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C         +   E+  +     + ++      +   + +F   T + +E      
Sbjct: 42  CTFCGDVGVGFESRNNLESVEEQLQKNINYIGSKYHAKKFIA-YFQNYTNTYVEQSKFEE 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQSLR 146
            +    +       VEI I   P  V     +  +           + LG+Q++   +L+
Sbjct: 101 CILSSIR----EDVVEIAISTRPDCVTEEQLKFLKTVNDRYHIEINMELGLQTVNYHTLK 156

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H  +E I  I   +    + +  +I  LP+ +        +   +  V+ + L+ 
Sbjct: 157 NINRGHTLAEFIDCIIRCKKYGFQTTVHMILNLPQDSKEDVIEGAKILSALEVNGVKLHS 216

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI-SNHSFLGAESLH 265
           L I KG++  + ++ G   + +    ++      S  S        I             
Sbjct: 217 LYIPKGSIMAQEYERGQFQIGTMEDYIERVAFFLSYLSPDIAIQRLIGRAPEKDVISCNF 276

Query: 266 NLNYWRYGDYI 276
           N ++W+  DYI
Sbjct: 277 NTSWWKIKDYI 287


>gi|255100435|ref|ZP_05329412.1| putative radical SAM-superfamily protein [Clostridium difficile
           QCD-63q42]
          Length = 328

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF          ++N I  F    + M +   P +    +F   T +   
Sbjct: 68  CTYCSKEGSGDF------AGNPKDNLISQFYNIKEMMLK-KWPHAKYIGYFQAYTNTYAP 120

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +       +   + ++I   P  +  +  +   +        + LG+Q++ +
Sbjct: 121 ---LEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHD 177

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R H+    +  +   ++   ++   +I  LP +         +      VD +
Sbjct: 178 STSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMVETAKAVGKMGVDGI 237

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + K T   KM ++G L L  ++  ++L      I     +  
Sbjct: 238 KIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIH 285


>gi|298242300|ref|ZP_06966107.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM
           44963]
 gi|297555354|gb|EFH89218.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM
           44963]
          Length = 502

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 14/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC       R    +   I   + E + + +            G    S  ++ 
Sbjct: 213 CNKVCTYC---IVPYRRGRERSRPIDELMIEARLLVEKGAK---EVTLLGQTIESYGLDL 266

Query: 87  QNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            N   + D +     +     I  + + P  +  +  +           +++ VQ+    
Sbjct: 267 ANQPNLADLMTSLSEIDGLDRIRFMTSYPRYMTDSMIERMASLPKVCEHLNIPVQAGHND 326

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R ++  E    I   R ++P +S   D+I     +T  +++  L        D 
Sbjct: 327 TLKRMKRGYSIEEYYEKIDRVRELWPNISLSTDVIVGFCGETDEEFQTTLDMIERVRFDV 386

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + +   ++  GT+  +   + D+ L  +   +      QS  +      Y
Sbjct: 387 VHVAAYSVRPGTVAAR--WEDDIPLVEKKRRLHAVEEVQSKIALAINRQY 434


>gi|242242576|ref|ZP_04797021.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
           W23144]
 gi|242234003|gb|EES36315.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
           W23144]
          Length = 514

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 79/231 (34%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +R+L           G    S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDI 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           + +   + D +     +         ++P        +   K G  V  I L VQS   Q
Sbjct: 277 EGLDYELGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNQ 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L        +H
Sbjct: 337 VLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQFEETLTLYDDVQFEH 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              Y  +   GT   KM  +  L +  E +      +   + S   +  YE
Sbjct: 397 AYTYLYSQRDGTPAAKMKDNVPLEVKKERLQRLNKKVG--MYSQQAMSQYE 445


>gi|213857489|ref|ZP_03384460.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 151

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 266 NLNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
           + N+  Y      D +G+G  A S +  G     +  +K  + + + V + G+A+     
Sbjct: 1   HRNFQGYTTQGDTDLLGMGVSAISMIGDG----YMQNQKELKRYYQQVDERGNALWRGIT 56

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ------RQGFIERVQFS 374
           L+ +      ++  L     +     E   G +       +LQ      + G ++  +  
Sbjct: 57  LTRDDCIRRDVIKALICNFRLDFNAVEQQWGLHFAEYFAEDLQLLSPLAKDGLVDISEKG 116

Query: 375 RLRCTQRGMTMLDSVI 390
            ++ T +G  ++ ++ 
Sbjct: 117 -IQVTAKGRLLIRNIC 131


>gi|149278784|ref|ZP_01884919.1| radical SAM superfamily protein [Pedobacter sp. BAL39]
 gi|149230403|gb|EDM35787.1| radical SAM superfamily protein [Pedobacter sp. BAL39]
          Length = 318

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 81/239 (33%), Gaps = 10/239 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ +S             +     M+  +          ++F   T +      + +
Sbjct: 51  CTYCNVDSFTPELSRKLPTIREQLEQGMERGKGFYKADKFI-VYFQPNTNTYAPTHYLKM 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRF 147
           + D           V  ++   P  ++        ++  +R    + +G++S+ +++L  
Sbjct: 110 MYDEALSINP-QDVVGFSVGTRPDCIDAEKV-ALLESYADRYDVDLEMGMESIYDETLEK 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQ 206
           + R  +  E + A+ L  N    +    I+  P +T       +     +  +  +  + 
Sbjct: 168 INRGCSHGEFVEAVKLLENSKLDLCVHTIFGFPWETEEMMLGYIHEINRFPQIKFVKFHH 227

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA--YEISNHSFLGAES 263
           L I +G++    +K     L S     DL      +     +    + IS+   L A +
Sbjct: 228 LHIVEGSIMGVKYKKEPFKLFSLEEYTDLLCKLIPLLRPDIVIQRLFGISDWDLLIAPN 286


>gi|319401418|gb|EFV89628.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis FRI909]
          Length = 517

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 79/231 (34%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +R+L           G    S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDI 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           + +   + D +     +         ++P        +   K G  V  I L VQS   Q
Sbjct: 277 EGLDYELGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNQ 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L        +H
Sbjct: 337 VLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQFEETLTLYDDVQFEH 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              Y  +   GT   KM  +  L +  E +      +   + S   +  YE
Sbjct: 397 AYTYLYSQRDGTPAAKMKDNVPLEVKKERLQRLNKKVG--MYSQQAMSQYE 445


>gi|167951174|ref|ZP_02538248.1| coproporphyrinogen III oxidase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 218

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 70/219 (31%), Gaps = 24/219 (10%)

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           Q+   +E  L   L    D LS++         F    +  ++ LP     +D+  ++  
Sbjct: 2   QSPESFEKTLDEILEVDPDRLSVFNYAHLPE-RFKPQRRINEVDLPLPQAKLDIMQMSIE 60

Query: 242 ITSAHGLHAYEISNHSFLGAE--------SLHNLNYWRYG-----DYIGIGPGAHSRVKV 288
             +A G     + + +    E        +L+  N+  Y      D + IG  +   V  
Sbjct: 61  KLTAAGYVYVGMDHFAKPDDELVIAQQDGTLYR-NFQGYSTHADCDLVAIGATSIGMVGP 119

Query: 289 GSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
              +      +  + +   + +   AV     LS++ Q    ++  L     +     E 
Sbjct: 120 SYAQNM----RTLDEYYDRIDQGRLAVFRGVELSTDDQLRRDVITRLICHFTLDFASVES 175

Query: 349 LAGRNL-DIECERNLQRQGFIERVQFSRLRCTQRGMTML 386
                  D  C RN +    + R    R     RG  + 
Sbjct: 176 RWRIRFSDYYCGRNDE----LCRAMAERWIARDRGSMVS 210


>gi|50546679|ref|XP_500809.1| YALI0B12628p [Yarrowia lipolytica]
 gi|49646675|emb|CAG83060.1| YALI0B12628p [Yarrowia lipolytica]
          Length = 553

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 74/234 (31%), Gaps = 42/234 (17%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   RS+
Sbjct: 103 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVDQLRSL 162

Query: 72  SSI------FFGGGTPSLIEPQ-------NIALILDGIAK----------NWTVSSNVEI 108
                       GGT   ++ +        +   L G+              + +  V I
Sbjct: 163 GHSVDKVEYIIMGGTFMSLDKEYREGFISQLHNALSGVHAEDVDEAVRLAQHSNTKCVGI 222

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQS+ E   R   R H          LA++  
Sbjct: 223 TIETRPDYCTETHLSDMLRYGCTRLEIGVQSVYEDVARDSNRGHTVKAVCHTFALAKDAG 282

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMH 219
            ++   ++  LP   M +   + +       +  D L LY   + +GT  Y++ 
Sbjct: 283 YKVVSHMMPDLPNVGMERDLDQFREYFSSPDFRTDGLKLYPTLVIRGTGLYELW 336


>gi|295674663|ref|XP_002797877.1| elongator complex protein [Paracoccidioides brasiliensis Pb01]
 gi|226280527|gb|EEH36093.1| elongator complex protein [Paracoccidioides brasiliensis Pb01]
          Length = 583

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 67/376 (17%), Positives = 125/376 (33%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTSNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H     +    L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVVETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  VD+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 361 NYTPNALVDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 REGISVKDWE-MLAGR 352
           R+      +   L G+
Sbjct: 476 RKCSKTHTFRPELTGQ 491


>gi|322492016|emb|CBZ27290.1| acetyltransferase-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 702

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 93/287 (32%), Gaps = 47/287 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ F      + QL    S             +  
Sbjct: 211 CPKDCHYCPNQPGIARSYLLKEPGVLRGFRNGWDPISQLYDRASALENNGHVVDKIELII 270

Query: 77  GGGTPSLIE---PQNIA----------------LILDGIAKNWTVSSN-----VEITIEA 112
            GGT S       +                     +  +A+  T++ +     + IT+E 
Sbjct: 271 LGGTFSFYPQRYAEEFMTASFYAANTYYDSAPLRPMRSLAEELTLNEDARCRIIGITVET 330

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     + +R  GV R+ LG+Q L++  L  + R+   ++ + AI    +   ++ 
Sbjct: 331 RPDYISARELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAIRRLLDAGFKVD 390

Query: 173 FDLIYALPKQTMTQWEMELQRALS-----YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +  LP  +  +     +   S     + VD   +Y       T   + +  G     
Sbjct: 391 AHWMPDLPGSSFEKDMELFETLFSAENELFQVDQWKVYPTATVPFTTISEWYAQGKYKPY 450

Query: 228 SE-NVAVDLYNLTQSITSAHGLH------AYEISNHSFLGAESLHNL 267
           +E +    +  L   I               +I     +G E   NL
Sbjct: 451 AELDNGAYMVKLLVYIMEHCPYRIRLNRIIRDIPTTYIMGGEKRCNL 497


>gi|297588171|ref|ZP_06946815.1| radical SAM protein [Finegoldia magna ATCC 53516]
 gi|297574860|gb|EFH93580.1| radical SAM protein [Finegoldia magna ATCC 53516]
          Length = 311

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 83/227 (36%), Gaps = 16/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC    H        +    S   +++  +Q    +  +     +F   + + +  + 
Sbjct: 43  CIYC----HEEGGSFENKEKHLSIREQLEKDKQTIENKYNAHKFISYFQNYSNTYMPLE- 97

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNRI-SLGVQSLEEQ 143
              +         V + V +++   P  +   + +  ++      V+ I  LG+Q+   +
Sbjct: 98  ---LFRQYVNEAVVENVVAVSVSTRPDCIAREHLEILKQLQDEKNVDIIIELGLQTSNNK 154

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + R H  ++ I A  + +    R+   +I ALP   M       +      +D   
Sbjct: 155 TLKIINRQHTVADFIRACLMIKEYGFRICTHVILALPWDDMDDVRETAKLLSVLEIDECK 214

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++ L I K T+  K +++G + L S +  V+             L  
Sbjct: 215 IHSLYIPKHTILAKWYEEGKVKLKSLDDYVNEVCEFLKYLDKDILIQ 261


>gi|189461157|ref|ZP_03009942.1| hypothetical protein BACCOP_01804 [Bacteroides coprocola DSM 17136]
 gi|189432136|gb|EDV01121.1| hypothetical protein BACCOP_01804 [Bacteroides coprocola DSM 17136]
          Length = 323

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 9/219 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  + + L E +       P+     +F   T +  E + +  
Sbjct: 47  CTYCN-NQTFNPEYCRTEKTVTTQLEEGKLFFARKYPQMKYLAYFQAYTNTYGELEQLKR 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +   +   V + V + I   P  +     +  +   +     +  G++S ++ +L  +
Sbjct: 106 MYE---EALDVENVVGLVIGTRPDCMPDSLLDYLEELNRQTFLLVEYGIESTDDHTLARI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +    A+             +I  LP +   +   + +      +  L ++QL 
Sbjct: 163 NRGHTFACTEDAVRRTAGRGILTGGHVILGLPGEDSEKLIRQAEALSQLPLTTLKMHQLQ 222

Query: 209 IEKGTLFYK--MHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + KGT           D  L + +  +DL          
Sbjct: 223 LIKGTRMAHEFAQHPEDFHLYTVDEYIDLAIDYIEHLRP 261


>gi|156547185|ref|XP_001604089.1| PREDICTED: similar to CG15433-PA [Nasonia vitripennis]
          Length = 469

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 97/257 (37%), Gaps = 20/257 (7%)

Query: 96  IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNAS 155
                + +  + ITIE  P      +       G  R+ +GVQS+ E   R   R H   
Sbjct: 129 KYSERSRTKCIGITIETRPDYCLKKHLSDMLNYGCTRLEIGVQSVYEDVARDTNRGHTVR 188

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKG 212
               +  L+++   ++   ++  LP   + +   +         +  D L +Y   + +G
Sbjct: 189 AVCESFQLSKDAGFKVIAHMMPDLPNVDIERDIEQFIEFFENPAFRADGLKIYPTLVIRG 248

Query: 213 TLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAES 263
           T  Y++ K G       +V V   +L   + +        Y +          S +   +
Sbjct: 249 TGLYELWKTGRYKSYPPSVLV---DLIARVLALIPPWTRVYRVQRDIPMPLVSSGVEHGN 305

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLS 322
           L  L   R  D +G+        +VG   +   ++ +    ++++R++  A    E FLS
Sbjct: 306 LRELALERMKD-LGVTCRDVRTREVGIQEIHNKVQPNE---VELIRRDYVANNGWETFLS 361

Query: 323 SEQQADEFLMMGLRLRE 339
            E    + L+  LRLR+
Sbjct: 362 YEDPLQDILVGLLRLRK 378


>gi|46202018|ref|ZP_00208353.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 483

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 80/236 (33%), Gaps = 17/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--E 85
           C  KC YC     +   +  ++   +S + EM++ ++  G R            SL    
Sbjct: 199 CPYKCNYCS--VKLSMGRGFRKRNPESIVDEMEFWKKRYGIRRFEVND---DCFSLDLKR 253

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I  ++        +    E+        V     +  + +G   +S G +S +++ +
Sbjct: 254 AEAICDLIIERK----LGITYEMYNGIRADRVSEVLLRKMKASGCVFVSFGCESGDQEIV 309

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +G+     +   A+ L R +  R S + I     +T   ++  L  A S   D ++ Y
Sbjct: 310 YNMGKKLKLEDVRNAVELTRKVGIRNSVNFIVGHRNETFEAFQRTLDFAASLPTDFVNFY 369

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
            L    GT  Y+  K     L      +        I S +    YE         
Sbjct: 370 NLVPYPGTEVYEWMKAEARQL------IPDQEFLSRIGSRNFEPVYETDEFPRADR 419


>gi|332159332|ref|YP_004424611.1| methyltransferase [Pyrococcus sp. NA2]
 gi|331034795|gb|AEC52607.1| methyltransferase [Pyrococcus sp. NA2]
          Length = 465

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 85/238 (35%), Gaps = 12/238 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S ++  K  + + +   + E+  +R   G + I  +     T +L   +
Sbjct: 200 CPFNCVFCS--SSLQFGKRWRGHSVDRVIEELSILRNEYGKKEIEFLD---DTFTLNRKR 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +    +   ++        +  ++      +  ++ G + I  G++S  ++ L F
Sbjct: 255 AIDIAMRIKREGLDITWTA----SSRVNTFNEKIAKAMKEGGCHTIYFGIESGSQRILDF 310

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +G+     ++I A+  A+    R     I   P +T  + E  ++ A    VD       
Sbjct: 311 IGKGITPKQSIDAVKTAKKAGLRTLGSFIIGFPDETREEVETTIRFAKKVGVDFAQFTIA 370

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
           T   GT  +    + +L+L         Y     +         +IS        S +
Sbjct: 371 TPYPGTRLWAYAVEHNLLLTRN---WRKYTTIDPVMKLKHFTPEQISRLLRKAYLSFY 425


>gi|90407388|ref|ZP_01215573.1| hypothetical protein PCNPT3_04102 [Psychromonas sp. CNPT3]
 gi|90311539|gb|EAS39639.1| hypothetical protein PCNPT3_04102 [Psychromonas sp. CNPT3]
          Length = 300

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 19/202 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  N      +   +  I+  L   +   Q    + I+  +F   
Sbjct: 33  CPNRDGTIGKGGCTFC--NVAAFADETQAQQSIKMQLQLRRAEVQHKAKKFIA--YFQAY 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +  E + +A + +    +   SS V + +   P  V            +      + L
Sbjct: 89  TSTYAEIELLASLYEQAVAD---SSIVGLCVGTRPDCVSDAVLNLLSSYLMRGYEVWLEL 145

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+QS  +++L+ + R H+ +        AR    ++   LI  LP +   +    LQR +
Sbjct: 146 GLQSAHDKTLKHINRGHDFASYEKVCKKARQRGIKVCTHLIIGLPNEGCAENVDSLQRVI 205

Query: 196 SYAVDHLSLYQLTIEKGTLFYK 217
              VD L L+ L I +G    K
Sbjct: 206 EIGVDGLKLHPLHIVRGATMAK 227


>gi|300707739|ref|XP_002996066.1| hypothetical protein NCER_100896 [Nosema ceranae BRL01]
 gi|239605330|gb|EEQ82395.1| hypothetical protein NCER_100896 [Nosema ceranae BRL01]
          Length = 559

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 66/371 (17%), Positives = 120/371 (32%), Gaps = 73/371 (19%)

Query: 28  CVKK------CPYCD------F-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC       F            + +R  +   + + Q+    ++ ++ 
Sbjct: 87  CPHIALTGNICIYCPGGPDSEFEYSTQSYTGYEPTSMRAIRSRYDPYDQA-RERLKQLKS 145

Query: 65  LTGPRSISSIFFGGGTPSLIEP----QNIALILDGIAKNWT-------------VSSNVE 107
           L            GGT   +      + I  + D ++ + +                 V 
Sbjct: 146 LGHNIDKVEYIIMGGTFMSLSETYKNEFIIKLHDALSGHKSNTVEEAVSVGAESKQKCVG 205

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P     ++       G  RI +GVQS+ E   R   R H       +  + ++ 
Sbjct: 206 ITIETRPDYCAKSHLDKMLAYGCTRIEIGVQSVYEDVARDTNRGHTVEAVCQSFCMTKDA 265

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS------YAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   ++  LP      W+ +L +         +  D L +Y   + +GT  Y++ ++
Sbjct: 266 GYKIVSHMMPNLPNVG---WKRDLAQFREYFDNPRFRSDGLKIYPTLVIRGTGLYELWRN 322

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGD 274
                 S +  +D      S         Y +          S +   ++  L   R  D
Sbjct: 323 NQYKNYSPDELIDFLARILSFVPPWTRI-YRVQRDIPMTLVSSGVEHGNIRELALLRMKD 381

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWL-----KMVRKNGHAVVEKE-FLSSEQQAD 328
           Y         + K    R      K     L     ++VR++  A    E FLS E    
Sbjct: 382 Y---------KTKCRDVRTREIGIKDIHEKLDTINPELVRRDYVANKGSETFLSYEDVKQ 432

Query: 329 EFLMMGLRLRE 339
           + L+  LRLR+
Sbjct: 433 DVLIGLLRLRK 443


>gi|78484818|ref|YP_390743.1| tRNA-i(6)A37 modification enzyme MiaB [Thiomicrospira crunogena
           XCL-2]
 gi|123741657|sp|Q31IF4|MIAB_THICR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78363104|gb|ABB41069.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thiomicrospira crunogena
           XCL-2]
          Length = 477

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 90/246 (36%), Gaps = 17/246 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+    SN +  +V     C K   YC F                  + E++ + +  G
Sbjct: 158 DNLAEPESNGVSAFVSVMEGCSK---YCTFCVVPYTRGEEFSRPFSDVMAEIESLAKQ-G 213

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            R ++ +      + G  P   E  ++A+++  +     +      T  ++P+ +  +  
Sbjct: 214 VREVNLLGQNVNAYRGEMPDG-EMADLAVLIHAVRAVEGIDRIRFTT--SHPNEMTQSLI 270

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
             Y +    V+ + L +QS  ++ L  + RNH A E  A I   + I P +S   D I  
Sbjct: 271 DCYAEVPELVSHLHLPIQSGSDRVLAMMKRNHMAIEYKATIRKIKKIRPDLSLSGDFIIG 330

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T   ++  L        D    +  +   GT    +  D +L +    +      L
Sbjct: 331 FPGETCDDFKETLALVKEMNYDRSFSFIYSPRPGTPAASLPDDVELHMKKRRLQALQAML 390

Query: 239 TQSITS 244
            +   +
Sbjct: 391 NEQTAA 396


>gi|282879835|ref|ZP_06288563.1| radical SAM protein, TIGR01212 family [Prevotella timonensis CRIS
           5C-B1]
 gi|281306300|gb|EFA98332.1| radical SAM protein, TIGR01212 family [Prevotella timonensis CRIS
           5C-B1]
          Length = 308

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 76/218 (34%), Gaps = 7/218 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ ++    Y    +          ++  +          +F   T +     ++  
Sbjct: 43  CTYCNNHTFNPSYCDPHQRITDQLEEGKRFFARKYPDMK-YLAYFQAYTNTYGSMASLRS 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           + +   +   V   V I I   P  +         +        +  GV++  + +LR +
Sbjct: 102 MYEEALR---VEDVVGIVIGTRPDCMSEELLDYLEELNRKTFLLVEYGVETANDDTLRRI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E+  AI        R    +I  LP ++ ++   +     +  +D L ++QL 
Sbjct: 159 RRGHTFAESQHAIERTHQRGIRTGAHIIVGLPGESASETIAQAPLISALPIDILKIHQLQ 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           I + T   + +++    + + +  +D+          +
Sbjct: 219 IIQHTQLAREYREKPFHVYTVDEYMDVMIGYLEQLRPN 256


>gi|237721204|ref|ZP_04551685.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293370406|ref|ZP_06616960.1| radical SAM protein, TIGR01212 family [Bacteroides ovatus SD CMC
           3f]
 gi|299148440|ref|ZP_07041502.1| radical SAM protein, family [Bacteroides sp. 3_1_23]
 gi|229449000|gb|EEO54791.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292634554|gb|EFF53089.1| radical SAM protein, TIGR01212 family [Bacteroides ovatus SD CMC
           3f]
 gi|298513201|gb|EFI37088.1| radical SAM protein, family [Bacteroides sp. 3_1_23]
          Length = 325

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 67/217 (30%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKSIAIQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 103 LKRKYEEALAVDGVVGLVIGTRPDCMPESLLRYLEDLNKHTFLMVEYGIESTCDETLKRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T        +      +  L ++QL 
Sbjct: 163 NRGHTYADTVEAVCQTAACGILTGGHIILGLPGETHDTMVAHAEILSDLPLATLKIHQLQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     +          N   +  +L       
Sbjct: 223 LIRGTRMAHEYDVTPAGFHLFNEVEEYIDLVIDYVEH 259


>gi|314936546|ref|ZP_07843893.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
           subsp. hominis C80]
 gi|313655165|gb|EFS18910.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
           subsp. hominis C80]
          Length = 514

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 82/235 (34%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C K C YC   F     R +  Q+         ++ +R+L           G    S   
Sbjct: 223 CDKFCTYCIVPFTRGKERSRRPQD--------IIEEVRELAREGYKEITLLGQNVNSY-- 272

Query: 86  PQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            ++I  +  G+       SN++I       ++P        +   K G  V  I L VQS
Sbjct: 273 GKDIKDLDYGLGDLLEDISNIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQS 332

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ +GR ++    +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 333 GNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDEV 392

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +H   Y  +   GT   KM  +    +  + +      + Q   S   +  YE
Sbjct: 393 QFEHAYTYLYSQRDGTPAAKMKDNVPTEVKKDRLQRLNKKVGQ--YSEKAMQNYE 445


>gi|296126486|ref|YP_003633738.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
 gi|296018302|gb|ADG71539.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
          Length = 313

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 28/241 (11%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  K     C +C+ NS+   Y + +EN  + ++  ++  ++          +F  GTP 
Sbjct: 31  CAHKTNDGGCRFCNLNSYKPPY-IIEENINKQWINGVENYKRRYQK---FYAYFQLGTP- 85

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNR---ISLGV 137
            + P      L    K     + V +   A    +E N  +      +  N+   + +G+
Sbjct: 86  -LSPLASKESLLYANKLIHFDNCVGLMFGARSDMLEDNVLKELNDLSSSFNKEIWLEMGL 144

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPK----------QTMT 185
           QS  +++  F+ R HN       +   +  +P   +   +I+ LPK          +   
Sbjct: 145 QSSNDETSLFINRGHNYKSFADTVKHIKKNYPNLIICTHVIFGLPKKFIDEKNIELERRE 204

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                ++   S  +D +  +QL I KG+ F  M+K+    +  E+  +DL     S+T  
Sbjct: 205 DMLQTVKDISSIEIDAVKFHQLDIVKGSYFENMYKEYHFPVLDEDFYIDLMCEAISLTRE 264

Query: 246 H 246
           +
Sbjct: 265 N 265


>gi|260171743|ref|ZP_05758155.1| hypothetical protein BacD2_07748 [Bacteroides sp. D2]
 gi|315920055|ref|ZP_07916295.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693930|gb|EFS30765.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 325

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +      +  
Sbjct: 47  CTYCN-NQTFNPDYCRTEKSIAIQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +  +     +   K     +  G++S  +++L+ +
Sbjct: 103 LKRKYEEALAVDGVVGLVIGTRPDCMPESLLHYLEDLNKHTFLMVEYGIESTCDETLKRI 162

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T      + +      +  L ++QL 
Sbjct: 163 NRGHTYADTVEAVCQTAACGILTGGHIILGLPGETHDTMVAQAEILSYLPLATLKIHQLQ 222

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     +          N   +  +L       
Sbjct: 223 LIRGTRMAHEYDVTPAGFHLFNEVEEYIDLVIDYVEH 259


>gi|255007788|ref|ZP_05279914.1| hypothetical protein Bfra3_01538 [Bacteroides fragilis 3_1_12]
 gi|313145493|ref|ZP_07807686.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134260|gb|EFR51620.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 311

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 63/189 (33%), Gaps = 7/189 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 48  CTYCN-NQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTY---DELEG 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +        +   K     +  G+++  + +L+ +
Sbjct: 104 LKRKYEEALSVDGVVGLVIGTRPDCMPDPLLHYLEELNKHSFLLVEYGIETTRDATLKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP ++  +   +        +  L ++QL 
Sbjct: 164 NRGHTYADTVEAVQRTAACGILTGGHVILGLPGESREEIIAQATELSRLPLTTLKMHQLQ 223

Query: 209 IEKGTLFYK 217
           + +GT   +
Sbjct: 224 LIRGTKMAR 232


>gi|296809195|ref|XP_002844936.1| elongator complex protein 3 [Arthroderma otae CBS 113480]
 gi|238844419|gb|EEQ34081.1| elongator complex protein 3 [Arthroderma otae CBS 113480]
          Length = 576

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 125/376 (33%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
           C         C YC      DF     S+              +    Q   ++   +S+
Sbjct: 117 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQIKSL 176

Query: 72  SSI------FFGGGTPSLIEPQN----IALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +  +     I+ + + ++   T + +             V I
Sbjct: 177 GHSVDKVEYIIMGGTFMSLPEEYRETFISQLHNALSGYQTDNVDEAVQAGEMSNTKCVGI 236

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 237 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLSKDAG 296

Query: 169 PRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +      E      +  D L +Y   + +GT  Y++ + G   
Sbjct: 297 FKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 356

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 357 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 412

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 413 GTTCRDVRTREVGINEVKNKIRPNQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 471

Query: 338 REGISVKDWE-MLAGR 352
           R+  S   +   L G+
Sbjct: 472 RKCSSTHTFRPELTGQ 487


>gi|308068129|ref|YP_003869734.1| hypothetical protein PPE_01355 [Paenibacillus polymyxa E681]
 gi|305857408|gb|ADM69196.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 317

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 79/225 (35%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      R             +T+   ++  + L  P +    +F   T +    + 
Sbjct: 55  CTFCS----ARGSGDFAGRRRDDLVTQFNTIRDRQHLKWPNAKYIGYFQAYTNTYAPVEE 110

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + I +   V   V ++I   P  +  +      +        + +G+Q++ E + 
Sbjct: 111 LREYFEVILEQPGV---VGLSIATRPDCLPDDVVDYLAELNERTYLWVEMGLQTVHESTS 167

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    + A+   R    R+   +IY LP++T        +   +  V  + ++
Sbjct: 168 ELINRAHDTQCYLDAVEKLRKRNIRVCAHIIYGLPQETHEMMLDTGRAVAAMDVQGIKIH 227

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T   K ++ G L    ++  + L   T        +  
Sbjct: 228 LLHLMRKTPMVKQYEAGLLRFLEKDEYIKLIVDTLEFLPPEMIVH 272


>gi|307106895|gb|EFN55139.1| hypothetical protein CHLNCDRAFT_31217 [Chlorella variabilis]
          Length = 548

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 44/235 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+       +R+
Sbjct: 70  CPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARARV-DQLRR 128

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDG-------------IAKNWTVSSNVE 107
           L            GGT   +        +  + D                   + +  + 
Sbjct: 129 LGHSVDKVEFILMGGTFMSLPADYRDYFVRNLHDALSGHSSKDVAQAVRYSEQSRTRCIG 188

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +TIE  P      +       G  R+ +G+QS  E   R   R H  +      HLA++ 
Sbjct: 189 MTIETRPDFCLTPHLAQMLSYGCTRLEIGLQSTYEDVARDTNRGHTVAAVGECFHLAKDA 248

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
             ++   ++  LP     +     +       +  D L LY   + +GT  Y++ 
Sbjct: 249 GFKVIAHMMPDLPNVGWERDIESFREFFENPAFRSDGLKLYPTLVIRGTGLYELW 303


>gi|325959575|ref|YP_004291041.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325331007|gb|ADZ10069.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 472

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 12/217 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   S        +   +   L EM+++    G   I +I F   T ++    
Sbjct: 197 CPMQCSFCS--SAALHGSKLRMRSVDKILDEMEYLVNEMG---IETIAFMDDTFTI---- 247

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +++        + +V     +   S+     +  +KAG   + +GV+S ++Q L  
Sbjct: 248 SKKRVIELCEGIEERNIDVMWGCTSRVDSLNKELLRKMKKAGCITVFMGVESADQQMLDT 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +         A  ++R    R    ++  +P  T    +  +         +      
Sbjct: 308 VNKQTTIERIKDAFEVSRQEKIRTIASVVLGMPGDTHESIKNTINFVKELNPSYAIFSLA 367

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           T   GT FY+   + DL+   +      Y L   I  
Sbjct: 368 TPYPGTRFYQQTLEKDLIKVKD---WSKYTLISPILE 401


>gi|331270096|ref|YP_004396588.1| oxygen-independent coproporphyrinogen III oxidase [Clostridium
           botulinum BKT015925]
 gi|329126646|gb|AEB76591.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum BKT015925]
          Length = 289

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 102/247 (41%), Gaps = 23/247 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    + + +  +   +     +++  R+      +  IF   G   +++ 
Sbjct: 25  CSHNKCTFCN----MYKDRSFKIKSLDEVFEDLELSRKYYKY--VKRIFLADGDALILKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +N+  IL  I + +     V +    A+       +    +K G++ I +GV+S  ++ L
Sbjct: 79  ENLEKILIKIKELFPECERVSVYGTPADILRKSEEDLIKLKKLGLDIIYIGVESGSDEVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW--EMELQRALSYAVDHLS 203
           + + +   + E I A    +    ++S  LI  L  +  +Q   +   +   +   D+L 
Sbjct: 139 KDVNKGVTSEEIIKAGQKVKRTGIKLSATLISGLGGKGKSQLHAKESARVISAINPDYLG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           +  L IE GT  Y   ++ ++V L  + V V+   L +++         E+SN       
Sbjct: 199 ILTLMIEPGTEIYNKVQNDEMVLLNPKEVMVETRELIRNL---------EVSN---CIFR 246

Query: 263 SLHNLNY 269
           S H  NY
Sbjct: 247 SNHASNY 253


>gi|261343905|ref|ZP_05971550.1| radical SAM protein [Providencia rustigianii DSM 4541]
 gi|282568291|gb|EFB73826.1| radical SAM protein [Providencia rustigianii DSM 4541]
          Length = 300

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 17/234 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSF--LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C +C+  S     +  Q    Q    +T +   ++          +F   T +  E   +
Sbjct: 45  CTFCNVASFSDENQATQTISQQIQQQVTRISRAKRYLA-------YFQAYTSTYAEVHLL 97

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SLGVQSLEEQSL 145
             + +   +   +   + + +   P  V  +       YR+ G      LG+Q+  +++L
Sbjct: 98  KQLYEEALQQADI---IGLCVGTRPDCVPESVLSLLSHYRQQGYEIWLELGLQTAHDKTL 154

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H           AR +  ++   LI  LP +        L+R L    D + L+
Sbjct: 155 HRINRGHGFEAYQQTTQKARALGLKVCTHLICGLPGEDAAMNMQTLERVLECGTDGIKLH 214

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L I +G++  K  + G L   S +    +       T    ++   IS  +  
Sbjct: 215 PLHIVEGSVMAKSWRAGRLQTISLDEYTHIAGEMIRHTPDDIVYH-RISASARK 267


>gi|219851595|ref|YP_002466027.1| histone acetyltransferase, ELP3 family [Methanosphaerula palustris
           E1-9c]
 gi|219545854|gb|ACL16304.1| histone acetyltransferase, ELP3 family [Methanosphaerula palustris
           E1-9c]
          Length = 526

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 3/149 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +T E  P      +     + GV ++ LGVQ L+++ L F  R    ++ + A    
Sbjct: 201 CVALTFETRPDWSRREHIDSMLRLGVTKVELGVQHLDDEILTFNRRGCTVADIVEANTSL 260

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           R+   ++ F ++  LP  T+ +       L     +  D L LY   +   +    +   
Sbjct: 261 RDAGIKVGFHMMPNLPGSTIEKDRAMFRTLFDDPRFRPDFLKLYPTLVTPYSEIEDLLNR 320

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           G     +E+  +DL    + +   +    
Sbjct: 321 GGYAPYAEDDLIDLIAYAKELLPEYVRLQ 349


>gi|322418328|ref|YP_004197551.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124715|gb|ADW12275.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 568

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 68/190 (35%), Gaps = 13/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S +   +  +     S + E++ +++  G   +    F   T +    +
Sbjct: 196 CPASCLFCS--SPLFWGRGVRFRSPASVVQELRMLKERYG---LIYFSFRDDTFTANRAR 250

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              I  +++    +      +    ++  ++V+       ++AG   I  GV+S   + L
Sbjct: 251 VLEICRLIEEQRLH------ILWNCQSRVNAVDQEMLVAMKRAGCECIQFGVESGSPEML 304

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + LG+    ++   A    R +   +S  LI  +P +     +  ++           + 
Sbjct: 305 KALGKRILPADVERAAAAVRRVGINLSVYLITGIPGEGEGDLQQTVRLIDRIRPQDGQVS 364

Query: 206 QLTIEKGTLF 215
            L    GT  
Sbjct: 365 PLVYYPGTEL 374


>gi|310640917|ref|YP_003945675.1| hypothetical protein PPSC2_c1455 [Paenibacillus polymyxa SC2]
 gi|309245867|gb|ADO55434.1| hypothetical protein PPSC2_c1455 [Paenibacillus polymyxa SC2]
          Length = 317

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 79/225 (35%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      R             +T+   ++  + L  P +    +F   T +    + 
Sbjct: 55  CTFCS----ARGSGDFAGRRRDDLVTQFNTIRDRQHLKWPNAKYIGYFQAYTNTYAPVEE 110

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + I +   V   V ++I   P  +  +      +        + +G+Q++ E + 
Sbjct: 111 LREYFEVILEQPGV---VGLSIATRPDCLPDDVVDYLAELNERTYLWVEMGLQTVHESTS 167

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    + A+   R    R+   +IY LP++T        +   +  V  + ++
Sbjct: 168 ELINRAHDTQCYLDAVEKLRKRNIRVCAHIIYGLPQETHEMMLDTGRAVAAMDVQGIKIH 227

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T   K ++ G L    ++  + L   T        +  
Sbjct: 228 LLHLMRKTPMVKQYEAGLLRFLEKDEYIKLIVDTLEFLPPEMIVH 272


>gi|322700274|gb|EFY92030.1| histone acetyltransferase [Metarhizium acridum CQMa 102]
          Length = 571

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 118/371 (31%), Gaps = 55/371 (14%)

Query: 28  CVKK------CPYC------DF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-- 69
           C         C YC      DF     S+              +    Q   ++   +  
Sbjct: 113 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKSL 172

Query: 70  -----SISSIFFGGGT---PSLIEPQNIALILDG--IAKNWTVSSNVE-----------I 108
                 +  I  GG     P       I+ + +     +   V   VE           I
Sbjct: 173 GHSVDKVEYIIMGGTFMSLPESYREDFISQLHNALSGYQTSKVDEAVEAGEMSNVKCVGI 232

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       LA++  
Sbjct: 233 TIETRPDYCLQPHLSDMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAG 292

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 293 FKVVSHMMPDLPNVGMERDIDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 352

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +DL     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 353 NYTPNGLIDLIARIFALIPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD---F 408

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 409 GTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILVALLRL 467

Query: 338 REGISVKDWEM 348
           R+      +  
Sbjct: 468 RKCTEKYTYRE 478


>gi|228475022|ref|ZP_04059750.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
           SK119]
 gi|228271007|gb|EEK12395.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
           SK119]
          Length = 514

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 82/235 (34%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C K C YC   F     R +  Q+         ++ +R+L           G    S   
Sbjct: 223 CDKFCTYCIVPFTRGKERSRRPQD--------IIEEVRELAREGYKEITLLGQNVNSY-- 272

Query: 86  PQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            ++I  +  G++      S ++I       ++P        +   K G  V  I L VQS
Sbjct: 273 GKDIKDLDYGLSDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQS 332

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ +GR ++    +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 333 GNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDEV 392

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +H   Y  +   GT   KM  +    +  + +      + Q   S   +  YE
Sbjct: 393 QFEHAYTYLYSQRDGTPAAKMKDNVPTEVKKDRLQRLNKKVGQ--YSEKAMQNYE 445


>gi|158522638|ref|YP_001530508.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511464|gb|ABW68431.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 537

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 10/215 (4%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC  DF S +   +  +   + S +   +  R +     I  I F         
Sbjct: 212 CPFACAYCCNDFLSRLYDTRKIRRRSVASLMP--ELSRAVADHPEIQYINFQDDCFLACS 269

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +        +           +   P+ V+    +  + AG+  +SLG+QS  ++ L
Sbjct: 270 DAYLEAFCHAYRQKIGRP----FIVRCIPAFVDAGRLKKLKAAGLVWMSLGLQSGSDRVL 325

Query: 146 -RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY-AVDHLS 203
                R+  + + +AA  L         +D+I   P +        ++   +      L 
Sbjct: 326 SDAYNRHSTSEQFLAAARLVHEAGIAAYYDVILDNPLENDEDRYKTIEVLTAAPRPYFLQ 385

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           L+ LT+  G+  Y+        L    +  + Y+ 
Sbjct: 386 LFALTLYPGSSLYERITADSPGLADAYLHKNFYHY 420


>gi|163815130|ref|ZP_02206511.1| hypothetical protein COPEUT_01286 [Coprococcus eutactus ATCC 27759]
 gi|158449539|gb|EDP26534.1| hypothetical protein COPEUT_01286 [Coprococcus eutactus ATCC 27759]
          Length = 292

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 15/218 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   S    +    E  I S +   +              +F   
Sbjct: 29  CPNRDGTVGIGGCIFCS-ASGSGDFSENAELDINSQIERAKMRIAGKCRCKRFIAYFQSF 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +  +P+ +       AK         ++I + P        +   +    +   I LG
Sbjct: 88  TNTYGDPETLRRKFLAAAKR---DDIAAVSIASRPDCFGPEILEIINEVRTIKPVWIELG 144

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+  +++ + + R +   E    ++  + +   +   +I  LP +T       ++    
Sbjct: 145 LQTSNDRTAKLINRCYTLDEYDKTMNNLKRLDVHVVVHMIIGLPGETKQDMISTVRYIAD 204

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
              D + L  L + K T+  KM+ +G+  + +     D
Sbjct: 205 SGADGIKLQLLHVLKNTVLEKMYINGEFDVLTFEEYAD 242


>gi|268589773|ref|ZP_06123994.1| radical SAM protein [Providencia rettgeri DSM 1131]
 gi|291314928|gb|EFE55381.1| radical SAM protein [Providencia rettgeri DSM 1131]
          Length = 300

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 15/233 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S     +        +   ++               +F   T +  E   +  
Sbjct: 45  CTFCNVASFADESQSSH-----TISEQIHQQITRISRAKRYLAYFQAYTSTYAEVSLLKQ 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           + +       +   V + +   P  V  +      +    G      LG+QS  +++L  
Sbjct: 100 LYEEALLQADI---VGLCVGTRPDCVPESVLSLLGQYQQKGYEIWLELGLQSAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H           AR++  ++   LI  LP +        L + L    D + L+ L
Sbjct: 157 INRGHGFYAYRQTTQKARSLGLKVCTHLICGLPGENGQMNMETLDKVLECGTDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            I +G++  K  + G L  L  +        + +   +    H   IS  +  
Sbjct: 217 HIVEGSVMAKSWRAGRLATLSLDEYTQTAGEMVRHTPTDIVYHR--ISASARK 267


>gi|289826617|ref|ZP_06545639.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 210

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 5/160 (3%)

Query: 103 SSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRFLGRNHNASEAI 158
           +S V + +   P  V     +    Y+  G      LG+Q+  +++LR + R H+ +   
Sbjct: 9   ASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQ 68

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +AR    ++   LI  LP +   +    ++R +   VD + L+ L I KG+   K 
Sbjct: 69  RTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVDGIKLHPLHIVKGSTMAKA 128

Query: 219 HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + G L     +            T    ++   IS  + 
Sbjct: 129 WEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 167


>gi|212223332|ref|YP_002306568.1| hypothetical protein TON_0186 [Thermococcus onnurineus NA1]
 gi|212008289|gb|ACJ15671.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 424

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 78/261 (29%), Gaps = 27/261 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP-SLIEP 86
           C   C YC        Y  G     +     +++ R++   R I+   F  G+P ++++ 
Sbjct: 174 CPFGCYYC-----QTPYIKGLRMRHRPIDQIVKYSRRMKDMRYITPNAFAYGSPGAILKI 228

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
             +  +L  +         +       E  P  V     +       NR +++G QS ++
Sbjct: 229 NKLEALLKALQPLRKEGRRLFYGTFPSEVRPEFVLPETLELLIDYADNRRLAIGAQSGDD 288

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME---LQRALSYAV 199
             LR + R H       A+            D I  LP +T          ++  +    
Sbjct: 289 AMLRAMHRIHKVEHVQKAVEYMLEYGFEPVVDFIVGLPNETPESQRKSIELMEWIIKKG- 347

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
             +  +      GT + +        L  E          +           E+S     
Sbjct: 348 GKVRAHYFMPLPGTPWAR---CKPSPLSEEMKKFLGRMAAKGKIEGSWGKQIELS----- 399

Query: 260 GAESLHNLN---YWRYGDYIG 277
               L NL    Y     YIG
Sbjct: 400 --RKLQNLMDEFYEEPMSYIG 418


>gi|300871195|ref|YP_003786068.1| putative Fe-S oxidoreductase [Brachyspira pilosicoli 95/1000]
 gi|300688896|gb|ADK31567.1| putative bacterial Fe-S oxidoreductase [Brachyspira pilosicoli
           95/1000]
          Length = 310

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 85/238 (35%), Gaps = 27/238 (11%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  K     C +C+ NS+  +    +E+ I++    +  +            +F  GTP 
Sbjct: 30  CAHKANNGGCKFCNLNSY--KPPYVEEDDIKN--QWINGVNNYKNRYKKYYAYFQLGTP- 84

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNR---ISLGV 137
            +     +  L    K       V +   A    +E              N+   + +G+
Sbjct: 85  -LSKLASSESLKYANKLIEFEDCVGLMFGARSDMLEEAVLLELNNLSKKYNKEIWLEMGL 143

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPK---------QTMTQ 186
           QS  + +  F+ R HN           +N +    +S  +I+ LPK         +T  +
Sbjct: 144 QSSNDDTSIFINRGHNFESFAEMTENIKNNYSNLIISTHIIFGLPKRIEGQKIILETREE 203

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               ++      +D +  +QL I  G+ F  M+K+ D     E+  ++L     SI  
Sbjct: 204 MLQTVRDISKLKIDSVKFHQLDIVVGSAFETMYKNYDFPTLDEDFYIELMVDAISILR 261


>gi|296132310|ref|YP_003639557.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296030888|gb|ADG81656.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 443

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 68/202 (33%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFGGGTPS--L 83
           C   C +C    H+   +  +   I++ L  ++ +  R LT  + I+   F  G+P    
Sbjct: 200 CPYLCSFC-QTGHIFGPQ-PRHRSIENILGYVRLLTERGLTDIKFITPNAFSYGSPDGKT 257

Query: 84  IEPQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVN-RISLGVQS 139
           I    +  +L G+         +       E  P  V        RK   N  + +G QS
Sbjct: 258 INVNKLEALLRGVRAIIGNRGRIFMGSFPSEVRPEHVTEETVNLVRKYANNDNLIIGAQS 317

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++ L    R H   +   A+ +        + D I+ LP +     +  +Q       
Sbjct: 318 GSQRILDLCHRGHKVEDIFRAVDITVRAGLVANVDFIFGLPGEEPADVKQTIQVIKELVE 377

Query: 200 DHLSLYQLTIE--KGTLFYKMH 219
               ++  T      T F K  
Sbjct: 378 RGARVHAHTFMPLPQTAFAKKP 399


>gi|116750654|ref|YP_847341.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699718|gb|ABK18906.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 531

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 69/222 (31%), Gaps = 27/222 (12%)

Query: 28  CVKKCPYCDF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  KC +C+F      +HV+   V      +     ++++R +     +          +
Sbjct: 254 CPCKCEFCNFVRGDRPAHVKPLGVLVSELTRIAARGIKYVRFVDDNFRLGRNDLNRVCEA 313

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +E       +     +                S+E  + +  ++AG   + +GV+S + 
Sbjct: 314 FLEAGLNLKWMSFFRAS----------------SLEGADLELLKRAGCIEVQMGVESADR 357

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY-AVDH 201
           + LR + +  +       I    +     S   I   P +T   +E  +    S      
Sbjct: 358 EVLRRMNKKSDPDMYARVIGRLLDAGIDCSCCFIVGFPGETRESFERTVDFIESMPNPSQ 417

Query: 202 -----LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
                 S+Y   +   +  Y+  K  +  L           +
Sbjct: 418 PGLFSWSIYPFLLVPLSPIYEPAKRAEYGLSGYMKEWKHSTM 459


>gi|239610148|gb|EEQ87135.1| histone acetyltransferase [Ajellomyces dermatitidis ER-3]
          Length = 582

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 122/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +        I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDGFISQLHNALSGYQTKNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +          + +   +L  L   R  D    
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTAGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 REGISVKDWE-MLAGR 352
           R+      +   L G+
Sbjct: 476 RKCSKTHTFRPELTGQ 491


>gi|188996756|ref|YP_001931007.1| RNA modification enzyme, MiaB family [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|229891027|sp|B2V930|MIAB_SULSY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|188931823|gb|ACD66453.1| RNA modification enzyme, MiaB family [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 437

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C KKC YC            +   I   L E+Q++ +  G + I     G    +     
Sbjct: 156 CDKKCTYC---IVPTTRGRERSRRIGDILREVQYLVE-DGVKEIH--LIGQNVTAYGKDF 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                  +L  +A+   V      T   +P  ++ +  +           + L +Q+  +
Sbjct: 210 GDVKFWELLKAVAEVDGVERIRFTT--GHPRDLDEDTIKVMADLPQICEALHLPIQAGSD 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E +  I L +   P +  S D+I   P +T   +   ++       D
Sbjct: 268 RILQAMDRGYTQKEYLQKIELLKKYIPNIALSTDIIVGFPGETYEDYLETVKVIKEVEYD 327

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
            +  ++ +   GT    +  
Sbjct: 328 QVFAFKYSPRPGTPAADLPM 347


>gi|323343012|ref|ZP_08083243.1| TIGR01212 family radical SAM protein [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463076|gb|EFY08271.1| TIGR01212 family radical SAM protein [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 313

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 72/227 (31%), Gaps = 16/227 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +      + +   +   +   + +     P +    +F   
Sbjct: 40  CPNRDGTCGSGGCNFCS--ARGSGDMILKNPDLDKQIEHSENIMLQKWPNAAKIAYFQAY 97

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRKAGVNRISLG 136
           + +    +N+  + D     +     V I I      ++      F+   +     I +G
Sbjct: 98  SNTHDSLKNLKKLYD---PFFDDDRFVGIDIATRSDCLDDEKIAYFEAMSRKKDLTIEIG 154

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++  ++  ++ R H+       I   +    R    +I   P++T             
Sbjct: 155 LQTIHPETSEWMNRGHDLESVTTCIQKLKAAGIRTCVHIINGFPQETPEMMLETADYLAK 214

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              + + ++ L I KGT     ++     L + +  VD+        
Sbjct: 215 MHPEMVKIHMLHIIKGTKLGAEYQKKPFPLLTRDEYVDVVVKQIERL 261


>gi|295399898|ref|ZP_06809879.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312111583|ref|YP_003989899.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
 gi|294978301|gb|EFG53898.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311216684|gb|ADP75288.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
          Length = 523

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 89/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R L   G + ++    ++   G   
Sbjct: 235 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRHLAAQGYKEVTLLGQNVNAYGKDF 288

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + ++   +  ++D + K   +         ++P   +    +   K G  V  I L VQS
Sbjct: 289 TDMK-YGLGDLMDELRK---IDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQS 344

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 345 GSTEILKLMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETEEQFEETLSLYREV 404

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 405 EFDSAYTFIYSPREGTPAAKMVDNVPME--VKKERLHRLNALVNEISARKMKEYE 457


>gi|319789101|ref|YP_004150734.1| hypothetical protein Theam_0119 [Thermovibrio ammonificans HB-1]
 gi|317113603|gb|ADU96093.1| conserved hypothetical protein [Thermovibrio ammonificans HB-1]
          Length = 305

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 78/217 (35%), Gaps = 12/217 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC F+      +  +++  +     ++ +R+         ++F   T +    + +  
Sbjct: 42  CIYC-FSGSDYDPEKRRKSVREQIAQGIERVRRRYKAEKF-LVYFQAYTNTYGPLEVLRS 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + D I +       V + +   P  V     +       +    + LG++S   +SLR++
Sbjct: 100 VYDTIRE---FPEVVGLIVGTRPDCVPDPVLELLHSYTSDYLVWVELGLESAHYRSLRWM 156

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            R H  S+ + A+   +      +   +I  LP +             +  VD + ++ L
Sbjct: 157 NRGHGVSDFVDAVLRIKRFKALNLCVHVILGLPTEDREDMLETADFLAALKVDGVKIHPL 216

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + +GT   +++ +    L   +  V    L      
Sbjct: 217 HVIRGTELERIYLEERFRLLELDEYV---ELAVDFLE 250


>gi|298372258|ref|ZP_06982248.1| radical SAM protein, family [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275162|gb|EFI16713.1| radical SAM protein, family [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 323

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 72/224 (32%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPS--- 82
           C YC+  S    Y   + +        +++  +    + I+        +  G   +   
Sbjct: 46  CIYCNNRSFSPPYCNPESSISSQIEEGIRFFSKYKSQKYIAYFQSYTNTYVRGNGSTDSY 105

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQS 139
            I   +   ++    +       V I +   P  V     + F          +  GV+S
Sbjct: 106 SISDSDFETLVAKYDEALRHPQVVGIAVGTRPDCVTERLLDYFAELSAKYYVLVEYGVES 165

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QTMTQWEMELQRALSYA 198
            + ++L  + R H   +++ AI+        +   LI  LP  +         +      
Sbjct: 166 TDNRTLEVINRGHTFEDSVWAINETARRGIEVGAHLILGLPGEEQPAAALRHAKEMSLLP 225

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +D L ++QL I + T+    +       P   +   +  L   I
Sbjct: 226 IDVLKIHQLQIIRNTVLCDRYMLAPDRYPLFTLEEYIELLIDFI 269


>gi|332970480|gb|EGK09470.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Psychrobacter sp.
           1501(2011)]
          Length = 528

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 73/224 (32%), Gaps = 16/224 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R I+ +      + G      +
Sbjct: 236 CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQ-GVREITLLGQNVNGYRGQK----D 290

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     V     I     +P     +  + Y K    V+ + L VQS   
Sbjct: 291 DGSICRFAELLHYVAHVDGIERIRYTTSHPLEFTDDIIEAYEKLPQLVSHLHLPVQSGSN 350

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + RNH     I  I   +A      +S D I   P +T   +   L  A     D
Sbjct: 351 KILAAMKRNHTIDVYINQIRKLMAVRPDMHLSSDFIIGFPGETEEDFLETLNLAKELDFD 410

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           H   +  +   GT   ++  D  L    E +A+    +  S   
Sbjct: 411 HSYSFIYSKRPGTPAAELPDDVSLATKKERLAIFQKVIVDSTLK 454


>gi|313901234|ref|ZP_07834722.1| radical SAM protein, TIGR01212 family [Clostridium sp. HGF2]
 gi|312954192|gb|EFR35872.1| radical SAM protein, TIGR01212 family [Clostridium sp. HGF2]
          Length = 343

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 78/222 (35%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C             ++  + F   MQ M Q   P  I   +F   T +      + +
Sbjct: 83  CTFCSALGSGDYAGDIHDDLFRQFDQGMQMM-QRKWPAGIPMAYFQAYTNTYAP---LPV 138

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +               I+I      +E +     +    ++   + LG+QS+ + + + +
Sbjct: 139 LKATFDPFAQRDDIAAISIATRADCLENDKIAYLQSLCTDKEIWVELGLQSIHDDTAQHI 198

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +  +    +   +++  L+ +LP +   Q            V  + ++ L 
Sbjct: 199 NRGHTYAQFLDCVERLSHTDLKIAVHLMNSLPGENKLQMLETAAALAKLPVHAVKIHMLH 258

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           I +GT   + ++    V+ S    +D+      +  A  +  
Sbjct: 259 IMEGTRMAQEYRQSPFVMLSREEYIDIVIRQLELLPAEMIIQ 300


>gi|281425701|ref|ZP_06256614.1| radical SAM protein [Prevotella oris F0302]
 gi|281400166|gb|EFB30997.1| radical SAM protein [Prevotella oris F0302]
          Length = 302

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 7/202 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    Y    +   Q      ++             +F   + +    + +  
Sbjct: 43  CTYCDNRTFNPNYCDRHKCVSQQLEEGKRFFSHKYPDMKF-LAYFQAFSNTYAPLEQLKA 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +   +   V   V I I   P  +           ++     I  G++S  + +L+ +
Sbjct: 102 RYEEALQ---VEDVVGIVIGTRPDCINDELLDYLAALQRHTFVLIEYGIESANDITLKRI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +    A+             +I  LP +   +   + +   S  +D L ++Q+ 
Sbjct: 159 NRGHDFACCCLAVEKTHARGILCGAHVILGLPGEDADESIRQAEIISSLPLDILKIHQMQ 218

Query: 209 IEKGTLFYKMHKDGDLVLPSEN 230
           I +GT     +      + S +
Sbjct: 219 IIRGTQLAAEYLRNPFPVYSVD 240


>gi|239826699|ref|YP_002949323.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
           sp. WCH70]
 gi|239806992|gb|ACS24057.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. WCH70]
          Length = 523

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R L   G + I+    ++   G   
Sbjct: 235 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDF 288

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + ++   +  ++D + K   +         ++P   +    +   K G  V  I L VQS
Sbjct: 289 TDMK-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHLPVQS 344

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   E +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 345 GSTEILKLMGRKYTREEYLELVRKIKEAIPDVALTTDIIVGFPNETEEQFEETLSLYREV 404

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 405 EFDSAYTFIYSPREGTPAAKMVDNVPME--VKKERLQRLNALVNEISARKMKEYE 457


>gi|307353916|ref|YP_003894967.1| histone acetyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307157149|gb|ADN36529.1| histone acetyltransferase, ELP3 family [Methanoplanus petrolearius
           DSM 11571]
          Length = 541

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 8/171 (4%)

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           +   + +    +           +  T E  P      +       GV ++ LGVQ +E 
Sbjct: 202 IFSFEELCEENETARVRC-----IAATFETRPDWCMKEHIDDMLALGVTKVELGVQQIEN 256

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAV 199
           + L +  R H       A  L R+   ++ F ++  LP  T+   +           +  
Sbjct: 257 RILEYNRRGHGVEATEEANRLLRDAGLKVGFHVMPNLPSATIEDDKKMFDLLFTDERFCP 316

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D L +Y   +  G+   ++ + G   +  E+  +DL    +S    +    
Sbjct: 317 DFLKIYPTLVTPGSEIEELWRSGQYDVYDEDDLIDLVAYGKSKLPPYVRLQ 367


>gi|327356377|gb|EGE85234.1| histone acetyltransferase [Ajellomyces dermatitidis ATCC 18188]
          Length = 582

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 122/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +        I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDGFISQLHNALSGYQAKNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +          + +   +L  L   R  D    
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTAGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 REGISVKDWE-MLAGR 352
           R+      +   L G+
Sbjct: 476 RKCSKTHTFRPELTGQ 491


>gi|323700258|ref|ZP_08112170.1| Radical SAM domain protein [Desulfovibrio sp. ND132]
 gi|323460190|gb|EGB16055.1| Radical SAM domain protein [Desulfovibrio desulfuricans ND132]
          Length = 478

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 71/244 (29%), Gaps = 33/244 (13%)

Query: 28  CVKKCPYCD---FNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  KC +C    F       R      + ++  + ++           +  ++F     S
Sbjct: 223 CPFKCEFCSVNRFFKGKWAFRSPGNVADELERLVADL----------GVRHVYFSDDLFS 272

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            + PQ     +    +      ++    E     V        RKAG  R+  GV+S   
Sbjct: 273 -LNPQ---RTIGICKEILDRRLDLVWMAETRVDCVNEEMLGWMRKAGCYRVYYGVESGSP 328

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + L+ + +     +   A  +           L+   P +T    +  +           
Sbjct: 329 RILKAINKGFTTDQVRRAFRMTHLAGMEPCCFLMVGNPGETPETIDETIALIREIRPGTS 388

Query: 203 SLYQ-LTIEKGTLFYKM----------HKDGDLVLPSENVAVDLYNLTQ---SITSAHGL 248
            +    TI  GT  Y++          +   D   P      ++ +L Q    +      
Sbjct: 389 PIVGITTILPGTRQYELSKRQGLISDDYWRTDAAPPLYTGEYEVDDLIQLQIRLARGVCP 448

Query: 249 HAYE 252
             YE
Sbjct: 449 EVYE 452


>gi|299140759|ref|ZP_07033897.1| radical SAM protein, family [Prevotella oris C735]
 gi|298577725|gb|EFI49593.1| radical SAM protein, family [Prevotella oris C735]
          Length = 318

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 7/202 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    Y    +   Q      ++             +F   + +    + +  
Sbjct: 59  CTYCDNRTFNPNYCDRHKCVSQQLEEGKRFFSHKYPDMKF-LAYFQAFSNTYAPLEQLKA 117

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +   +   V   V I I   P  +           ++     I  G++S  + +L+ +
Sbjct: 118 RYEEALQ---VEDVVGIVIGTRPDCINDELLDYLAALQRHTFVLIEYGIESANDITLKRI 174

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +    A+             +I  LP +   +   + +   S  +D L ++Q+ 
Sbjct: 175 NRGHDFACCRLAVEKTHARGILCGAHVILGLPGEDADESIRQAEIISSLPLDILKIHQMQ 234

Query: 209 IEKGTLFYKMHKDGDLVLPSEN 230
           I +GT     +      + S +
Sbjct: 235 IIRGTQLAAEYLRNPFPVYSVD 256


>gi|126465434|ref|YP_001040543.1| radical SAM domain-containing protein [Staphylothermus marinus F1]
 gi|126014257|gb|ABN69635.1| Radical SAM domain protein [Staphylothermus marinus F1]
          Length = 450

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 28  CVKKCPYC------DFNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC       F    R      E     I+  + +++++   +    + +I    
Sbjct: 181 CPYGCKYCQVSYMHGFYMRHRSIDNIVEYTGYMIRKNVRDIRFISPDSLAYGLKTISRK- 239

Query: 79  GTPSL-IEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNR-ISL 135
             P L +  + +  +     +             E  P  +  +  +  RK   N+ I L
Sbjct: 240 --PRLDLIEELLFRLYKKYVEKKNARIFYGSFPSEVRPEHLTRDAARILRKYVANKNIIL 297

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G Q+   + LR +GR H+  +  +A+  A       + D I  LP +T       L+   
Sbjct: 298 GAQTGSNRLLRLIGRKHSIEDVYSAVENAVKYGFIPNVDYIIGLPGETREDLYETLRSIK 357

Query: 196 SYAVDHLSLYQLTIE---KGTLFYKMHKDGDLVLPSENVA 232
                   ++ L +     G+ +  M          + + 
Sbjct: 358 KLVSIGARIH-LHVFLPLPGSPYAWMPPGKVPSWVKKELM 396


>gi|123492789|ref|XP_001326144.1| elongation protein 3 homolog [Trichomonas vaginalis G3]
 gi|121909054|gb|EAY13921.1| elongation protein 3 homolog, putative [Trichomonas vaginalis G3]
          Length = 537

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 12/157 (7%)

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
                  +    V +TIE  P      +       G  R+ +G+Q++ E  L ++GR H 
Sbjct: 196 ATTYAECSTDRAVALTIETRPDYCFAEHIDDMLTYGTTRVEIGLQTVWEDVLWYVGRGHG 255

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY------AVDHLSLYQL 207
             +   +    R    +++  ++  LP    T +E ++   +          D L LY  
Sbjct: 256 GDDVARSFRDCRRSGLKVTAHMMPNLPH---TDFERDIDGFVELFENPYWRPDGLKLYPT 312

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + +GT+ Y    D   V    +  +    L   I  
Sbjct: 313 LVMRGTMLYDQWVDKTYVPLDPDELI---TLISEILR 346


>gi|83944995|ref|ZP_00957361.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851777|gb|EAP89632.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 468

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 14/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E++ +    G R ++ +      F G  P 
Sbjct: 175 CDKFCTFC---VVPYTRGAEWSRPVDQIVAEVRALAA-KGVREVTLLGQNVNAFHGEAPK 230

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +  +   +     +     I     +P  ++ +  Q +      +    L VQ+
Sbjct: 231 GDPEGGVWGLGRLVRHLAKIGGIERIRFTTSHPKDMDDDLIQAFADEPKLMPYFHLPVQA 290

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A+E +  I   R   P ++   D+I   P +T   +E  ++     
Sbjct: 291 GSDKILKSMNRSHTAAEYLDIIARLRAARPDIAISGDMIVGFPGETEADFEATMELVRQV 350

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                  ++ +   GT    M    D  +  E +A     LT+ 
Sbjct: 351 NYASCFSFKYSKRPGTPGAAMFNQIDETVKGERLARLQALLTEQ 394


>gi|310829265|ref|YP_003961622.1| putative radical SAM protein [Eubacterium limosum KIST612]
 gi|308740999|gb|ADO38659.1| putative radical SAM protein [Eubacterium limosum KIST612]
          Length = 356

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 73/236 (30%), Gaps = 16/236 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC          +     +   + + +          +   +F   
Sbjct: 67  CPNRDGTAGKGGCIYCG-AKGGGNETLSDTLSVAEQVEKNRAYIAKRYKAKLFIPYFQSF 125

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----IS 134
           T +      +   +              + I   P  +         +    +     I 
Sbjct: 126 TNTYCSAFQLERWVREA--VGDGEGIAGVAISTRPDCLSSEQLDFLSRIQQEKQLDVSIE 183

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q+   ++L+ L R H+ S+ I A    +N   ++   +I  LP              
Sbjct: 184 LGLQTANYKTLKILNRGHSLSDYIEAAVAVKNHGLQLCTHVILDLPWDDRDDVVETAGVV 243

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +   D +  + L +EKGT+  +M+  G++ L  +   ++   L  +      +  
Sbjct: 244 SAAGSDFVKCHALYVEKGTVLAEMYLKGEISLFPKEEYIERCLLFLTHLRPDIVVQ 299


>gi|213025314|ref|ZP_03339761.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 233

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 8/188 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVN 131
           +F   T +      + ++     +  + +S V + +   P  V     +    Y+  G  
Sbjct: 7   YFQAYTSTF---AEVQVLRSMYQQAVSQASIVGLCVGTRPDCVPQAVVDLLCEYKDQGYE 63

Query: 132 RI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
               LG+Q+  +++LR + R H+ +       +AR    ++   LI  LP +   +    
Sbjct: 64  VWLELGLQTAHDKTLRRINRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQT 123

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++R +   VD + L+ L I KG+   K  + G L     +            T    ++ 
Sbjct: 124 MERVVETGVDGIKLHPLHIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH 183

Query: 251 YEISNHSF 258
             IS  + 
Sbjct: 184 -RISASAR 190


>gi|110636243|ref|YP_676451.1| RNA modification protein [Mesorhizobium sp. BNC1]
 gi|122965426|sp|Q11BD9|MIAB_MESSB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|110287227|gb|ABG65286.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chelativorans sp. BNC1]
          Length = 475

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 16/223 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R ++ +      + G  P 
Sbjct: 186 CDKFCTFC---VVPYTRGAEVSRPVAQIVAEAERLAE-AGVRELTLLGQNVNAWHGEGPD 241

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSL 140
                 +  +L  +A+   +      T  ++P  ++      +R     +  + L VQ+ 
Sbjct: 242 G-REWGLGRLLFRLAEIPGLDRLRYTT--SHPRDMDEELIAAHRDLIKLMPYLHLPVQAG 298

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A++ +  I   R   P ++   D I   P +T   +E  ++      
Sbjct: 299 SDRILKAMNRKHTAADYLRLIERIRAARPDIAMSGDFIVGFPGETDRDFEDTMRIVRDVN 358

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 ++ +   GT    MH      +  E +      L + 
Sbjct: 359 YAQAFSFKYSPRPGTPGADMHDQVPDAVKDERLQRLQALLAEQ 401


>gi|254173086|ref|ZP_04879760.1| MiaB-like tRNA modifying enzyme, archaeal-type [Thermococcus sp.
           AM4]
 gi|214033242|gb|EEB74070.1| MiaB-like tRNA modifying enzyme, archaeal-type [Thermococcus sp.
           AM4]
          Length = 424

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 24/241 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+  C YC      R  +   +++    + +        G R I       G        
Sbjct: 148 CLNACTYCA----TRFARGVLKSYKPELVVKWVKEALARGYREIILSSEDTGCYGFDIGT 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGVNR-ISLGVQSLEE 142
           N+A +LD I     +     + +   NP+          + Y+   V R + L VQS + 
Sbjct: 204 NLAELLDEITA---IEGEFRVRVGMMNPNHVLKFLDELIEAYQDEKVYRFLHLPVQSGDN 260

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR +GRN+   E    +   R   P   ++ D+I   P +T   +   ++       D
Sbjct: 261 EILRRMGRNYTVEEFKEIVRAFRKKIPELNLNTDIIVGFPGETEEAFRNTVELVKRIKPD 320

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +++ + +   GT+  +        LP   V      L +          YEI N +++G
Sbjct: 321 KINVSRYSARPGTIAARW-----KQLPGWLVKERSRELHRLRLQIA----YEI-NKAYVG 370

Query: 261 A 261
            
Sbjct: 371 R 371


>gi|253682815|ref|ZP_04863610.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum D str. 1873]
 gi|253561014|gb|EES90468.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum D str. 1873]
          Length = 289

 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 100/247 (40%), Gaps = 23/247 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    + + +  +   +     +++  R+      +  IF   G   +++ 
Sbjct: 25  CSHNKCTFCN----MYKDRNFKIKSLDEVFEDLELSRKYYKY--VRRIFLADGDALILKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +N+  IL  I + +     V +    A+       +    +K G++ I +GV+S  ++ L
Sbjct: 79  ENLEKILMKIKELFPECERVSVYGTPADILRKSEEDLIKLKKLGLDIIYIGVESGSDEVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           + + +   + E I A    +    ++S  LI  L    ++    +   +   +   D+L 
Sbjct: 139 KDVNKGVTSEEIIKAGQKVKRTGIKLSATLISGLGGKEKSKLHAKESARVISAINPDYLG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           +  L IE GT  Y   ++ ++  L  + V V+   L +++         E+SN       
Sbjct: 199 ILTLMIEPGTQIYNKVENNEMTLLNPKEVMVETRELIRNL---------EVSN---CIFR 246

Query: 263 SLHNLNY 269
           S H  NY
Sbjct: 247 SNHASNY 253


>gi|237752934|ref|ZP_04583414.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375201|gb|EEO25292.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 317

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           I+F   T +      +  +         V   V ++I     SV++       +    + 
Sbjct: 101 IYFQSFTNTYAPFDTLQKLYTEALSLPNV---VGMSIGTRTDSVDLKLLDFLAELAQRKG 157

Query: 133 ----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
               +  G+QS+ +++L+F+ R H        I  ++    +    +IY LP +T     
Sbjct: 158 QEIWVEYGIQSVYDETLKFINRGHGTENMEFCITESKKRGLKTCSHIIYGLPNETKEMML 217

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             L+  L +  D + ++ L I + TL   M++ G+    + N   D  +L         
Sbjct: 218 YSLKTVLDWGSDGIKVHPLYIIEKTLLANMYEKGEYKPITLN---DYIDLIVESLKMIP 273


>gi|224370805|ref|YP_002604969.1| putative Fe-S oxidoreductase family protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223693522|gb|ACN16805.1| putative Fe-S oxidoreductase family protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 560

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 58/194 (29%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F    R      E F+            L   R I+  F    T ++ 
Sbjct: 192 CPGHCTFCGSPRFWPGARVRFHSPEWFVAQL--------SLLEKRGINHFFVSDDTFTM- 242

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              +   ++            +     +    ++       R+AG  +IS GV+S     
Sbjct: 243 ---DKTRVIKVCRIIIEQELPITWVAISRVDFIDSEILLWMRRAGCTQISFGVESGSADI 299

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + LG+  +    + A  L  +         IY  P +T       L   +         
Sbjct: 300 RKRLGKPMDRERIVKAFALTVSYGIMPRAYFIYGSPGETDKTIRESLDLIMEIRPLSAIF 359

Query: 205 YQLTIEKGTLFYKM 218
           Y L +  GT  Y+ 
Sbjct: 360 YLLVLFPGTHLYQR 373


>gi|223986107|ref|ZP_03636130.1| hypothetical protein HOLDEFILI_03438 [Holdemania filiformis DSM
           12042]
 gi|223961912|gb|EEF66401.1| hypothetical protein HOLDEFILI_03438 [Holdemania filiformis DSM
           12042]
          Length = 316

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 68/222 (30%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  +          E  +  ++     MR           +F   T +      ++ 
Sbjct: 54  CTFCTSSGSGEFAGDRAEPLLDQYIKGQAVMRHKWPDADFIP-YFQAYTNTYGP---LSK 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I   +           I I      +E            ++   + LGVQS+ + +   +
Sbjct: 110 IQACVKPFLDRPEVAAIAIATRADCLEPEKIAWLASCCASKEIWLELGVQSVHDATALTI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +E +  +        ++   LI  LP +        +++     +  + L+ L 
Sbjct: 170 NRGHSYAEVVETVQRLALTPLKICVHLIDGLPGEDEEMMLETVRQINLLPIHAVKLHMLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + T   + + +    L S    V L      +     +  
Sbjct: 230 LMRDTQLARRYAEQPFPLLSREEYVGLVVRQLELLRPEIIIQ 271


>gi|327439595|dbj|BAK15960.1| 2-methylthioadenine synthetase [Solibacillus silvestris StLB046]
          Length = 511

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     +Q +R+L        +  G    +     
Sbjct: 219 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRELAAQGYKEIMLLGQNVNAYGKDF 272

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D + +   +         ++P   + +  +   K G  V+ I L VQS   
Sbjct: 273 DDIEY-RLGDLMDELRKIDIPRIRFTTSHPRDFDDHLIKVLAKGGNLVDHIHLPVQSGSN 331

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +     +  +   +   P ++   D+I   P +T  Q++  L        D
Sbjct: 332 EILKIMARKYTREHFLQLVDKIKAAIPGVTLTTDIIVGYPNETEEQFQETLDLYRQVGFD 391

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
               Y  +  +GT   KM  +
Sbjct: 392 MAFTYIYSPREGTPAAKMVDN 412


>gi|302336416|ref|YP_003801623.1| Histone acetyltransferase [Olsenella uli DSM 7084]
 gi|301320256|gb|ADK68743.1| Histone acetyltransferase [Olsenella uli DSM 7084]
          Length = 640

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 3/129 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P  +   +   +R+ G  +I +G+QS  +++L   GR  +  +   +  L R
Sbjct: 280 VGLAIETRPDLITPASLTLFRQLGCTKIQMGIQSTRQETLDANGRRTSIEQVRRSFSLIR 339

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++   L+  L   T    + + +  +S   +  D + LY   +  GT   ++ + G
Sbjct: 340 LFGFKIHAHLMVNLLGSTPESDKEDFRTFVSDPGFLPDEIKLYPCALVAGTRLVRLFERG 399

Query: 223 DLVLPSENV 231
                    
Sbjct: 400 AWRPYDREE 408


>gi|302505753|ref|XP_003014583.1| hypothetical protein ARB_07145 [Arthroderma benhamiae CBS 112371]
 gi|291178404|gb|EFE34194.1| hypothetical protein ARB_07145 [Arthroderma benhamiae CBS 112371]
          Length = 541

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 98/267 (36%), Gaps = 17/267 (6%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+
Sbjct: 198 CVGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLS 257

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +      E      +  D L +Y   + +GT  Y++ + 
Sbjct: 258 KDAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRT 317

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGD 274
           G     + N  +D+     ++        Y +     +     G E  +L  L   R  D
Sbjct: 318 GRYKNYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD 376

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
               G               +  +  P   +++VR++  A    E FL+ E    + L+ 
Sbjct: 377 ---FGTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILIG 432

Query: 334 GLRLREGISVKDWE-MLAGRNLDIECE 359
            LRLR+  S   +   L G+   +  E
Sbjct: 433 LLRLRKCSSKYTFRPELTGQPTSLVRE 459


>gi|118590489|ref|ZP_01547891.1| hypothetical protein SIAM614_02901 [Stappia aggregata IAM 12614]
 gi|118436952|gb|EAV43591.1| hypothetical protein SIAM614_02901 [Stappia aggregata IAM 12614]
          Length = 491

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                ++  ++E + M  + G R I+ +      + G +P 
Sbjct: 192 CDKFCTFC---VVPYTRGAEVSRSVEQIVSEAERMAAV-GVREITLLGQNVNAYHGASP- 246

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +  +   + +   +     +     +P  ++ +    +R     +  + L VQS
Sbjct: 247 ---DGAVWGLGRLLRRLSEIDGLDRLRYTTSHPRDMDDDLIAAHRDLKSLMPYLHLPVQS 303

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H   E    I   R   P ++   D I   P ++   +E  +      
Sbjct: 304 GSDKILKAMNRRHTRDEYFRLIDRIREAAPDIALSGDFIVGFPGESDQDFEDTMDLIRQV 363

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT    M
Sbjct: 364 GYGSAFSFKYSSRPGTPGATM 384


>gi|261198351|ref|XP_002625577.1| histone acetyltransferase [Ajellomyces dermatitidis SLH14081]
 gi|239594729|gb|EEQ77310.1| histone acetyltransferase [Ajellomyces dermatitidis SLH14081]
          Length = 582

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 122/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIEPQN----IALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +        I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDGFISQLHNALSGYQTKNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFRLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNH-------SFLGAESLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +          + +   +L  L   R  D    
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTAGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 REGISVKDWE-MLAGR 352
           R+      +   L G+
Sbjct: 476 RKCSKTHTFRPELTGQ 491


>gi|304439566|ref|ZP_07399471.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371945|gb|EFM25546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 433

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I+  + E + + +      + +    G     +  +
Sbjct: 154 CNRYCTYC---IIPYARGPIRSRTIEDSVEEAKRLSEAGYKELVLTGIHIGSYGKDLGDE 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I K   +      +IE  P ++  +  +  +  G   +   L +QS     L
Sbjct: 211 RLVDLIEEITKVDGIERIRLSSIE--PITITRDFLERIKATGKVCDHFHLSLQSGSNAVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E I    L R  +P +    D+I   P +T   +E  +          + 
Sbjct: 269 KAMNRRYTREEYIETCDLIREYYPYVGLTTDIIVGFPGETDEDFEDTVDLVKRVEFSKIH 328

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           +++ +   GT   +M    D
Sbjct: 329 VFKYSKRSGTPAAEMKNQVD 348


>gi|307594548|ref|YP_003900865.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
           14429]
 gi|307549749|gb|ADN49814.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
          Length = 472

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 20/246 (8%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CPY C F S    Y  G+    +S       +         + I F     +L       
Sbjct: 208 CPYGCSFCS--TSYFWGRIIRYRSAKAVADEIEDTVNTYKTNIIVFTDDEFTL----GKR 261

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            + + + +      ++  +  +   +++       +K G   +  GV+S  + ++  +G+
Sbjct: 262 FVYEFLRELEERKLDISFSCGSRVDTIDREMMIALKKHGCTALYFGVESGSQDTINRIGK 321

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
                +A+     A+ I        +   P +++   +  ++ A+     +      T  
Sbjct: 322 RITLEQAVRVFQWAKEIKIDHVGSFVIGFPWESIDDMKNTVKFAMKLNPTYAQFTVATPY 381

Query: 211 KGTLFYKMHKDGDL-----VLPSENVAVDLY------NLTQSITSAHGLHAYEISNHSFL 259
            GT  Y      +L           +   +          Q +     +  Y  S   FL
Sbjct: 382 PGTPLYYQALSENLIEDWNWEHWTTLKAVMRGYKFTKEQAQKMLQWAYVKYY--SRLGFL 439

Query: 260 GAESLH 265
             E +H
Sbjct: 440 IHELIH 445


>gi|254172700|ref|ZP_04879375.1| Fe-S oxidoreductase family protein [Thermococcus sp. AM4]
 gi|214033629|gb|EEB74456.1| Fe-S oxidoreductase family protein [Thermococcus sp. AM4]
          Length = 417

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C  +C YC    +++ +++     I   +   + M+ +   R I+   F  G+P  I   
Sbjct: 167 CPFRCYYC-QTPYIKGFRMRHRP-IDQIVKYSRRMKDM---RYITPNAFAYGSPGAILKL 221

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
            + + +   L  + K            E  P  V     +       NR +++G QS ++
Sbjct: 222 NKLEALLKALQHLRKEGRRLFYGTFPSEVRPEFVLPETLELLIDYADNRRLAIGAQSGDD 281

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
             L+ + R H       A+            D I  LP ++         L + +     
Sbjct: 282 AMLKAMHRLHRVEHVQRAVEYMLEYGFEPVVDFIVGLPNESEESQRKSIELMKWIMRKGG 341

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
            +  +      GT + +   
Sbjct: 342 KVRAHYFMPLPGTPWTRCRP 361


>gi|302658617|ref|XP_003021010.1| hypothetical protein TRV_04875 [Trichophyton verrucosum HKI 0517]
 gi|291184885|gb|EFE40392.1| hypothetical protein TRV_04875 [Trichophyton verrucosum HKI 0517]
          Length = 541

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 97/267 (36%), Gaps = 17/267 (6%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+
Sbjct: 198 CVGITIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFKLS 257

Query: 165 RNIFPRMSFDLIYALPKQTMTQWE---MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +      E      +  D L +Y   + +GT  Y++ + 
Sbjct: 258 KDAGFKVVSHMMPDLPNVGMERDLFQFQEYFENPDFRTDGLKIYPTLVIRGTGLYELWRT 317

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGD 274
           G     + N  +D+     ++        Y +     +     G E  +L  L   R  D
Sbjct: 318 GRYKNYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD 376

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMM 333
               G               +  +  P   +++VR++  A    E FL+ E    + L+ 
Sbjct: 377 ---FGTTCRDVRTREVGINEVKNKIRPNQ-IELVRRDYTANGGWETFLAYEDPKQDILIG 432

Query: 334 GLRLREGISVKDWE-MLAGRNLDIECE 359
            LRLR   S   +   L G+   +  E
Sbjct: 433 LLRLRRCSSKYTFRPELTGQPTSLVRE 459


>gi|323345218|ref|ZP_08085441.1| TIGR01212 family radical SAM protein [Prevotella oralis ATCC 33269]
 gi|323093332|gb|EFZ35910.1| TIGR01212 family radical SAM protein [Prevotella oralis ATCC 33269]
          Length = 310

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 78/216 (36%), Gaps = 7/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    Y   ++   +      ++  +          +F   T +    +++  
Sbjct: 43  CTYCDNRTFNPAYCNRKKTITEQLEDGKRFFSKKYPAMK-YLAYFQAYTNTYSPLESLRR 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +       V   V I I   P  +     +  +G  K     +  G+++  +++L  +
Sbjct: 102 MYEEALSTEDV---VGIVIGTRPDCMPEALLDYLEGLNKQTFVLVEYGIETANDRTLLHI 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ + + +A+             +I  LP++   +   +     +  +D L ++Q+ 
Sbjct: 159 NRGHDFACSRSAVERTHARGILTGAHIILGLPEEDREESLRQAPIISALPIDILKIHQMQ 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           I +GT   + + +    L +    ++L      +  
Sbjct: 219 IIRGTRLAEEYVEHPFHLYTPQEYIELIVGYIQLLR 254


>gi|167758171|ref|ZP_02430298.1| hypothetical protein CLOSCI_00509 [Clostridium scindens ATCC 35704]
 gi|167664068|gb|EDS08198.1| hypothetical protein CLOSCI_00509 [Clostridium scindens ATCC 35704]
          Length = 336

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 78/240 (32%), Gaps = 36/240 (15%)

Query: 28  CVKK-----CPYC----------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           C  +     C +C          D  + V +        I+         ++    + I+
Sbjct: 54  CPNRIAGSGCAFCAEAGTGFEAMDCMTPVTQQLNVTRKHIE---------KKYHAHKFIA 104

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---- 128
             +F   T + +  +     +   A    V+   EI I   P  +        ++     
Sbjct: 105 --YFQNYTNTFLPIEKFEAYMREAASLPYVA---EIAISTRPDCITAEYLDVLQRIRGEH 159

Query: 129 --GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             G+  I LG+Q+    +L  + R H  +E I A+   R     +   +I  LP   M  
Sbjct: 160 DIGIT-IELGLQTTNCHTLASISRGHTLAEFIDAVLAIRQYDFEICAHVILNLPGDDMLD 218

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                +   +  +  + ++ L I K T     +++G + L S+   ++            
Sbjct: 219 TIETSKVLSALRIPVVKIHSLYIAKNTQLCDDYENGTITLCSKEEYLERLMAFLEYLDPA 278


>gi|222055013|ref|YP_002537375.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221564302|gb|ACM20274.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 472

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 90/256 (35%), Gaps = 26/256 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C   C YCD +   R ++     +I   L  +           I  +FF     +     
Sbjct: 210 CPYHCSYCDRSVFSRGFRFNSPGYIFEHLKYLHR------DFGIRHVFFYDDLFTFDRSR 263

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +  +L  +     V+ N    +E     V+       +K+G  +++ G++S + + L
Sbjct: 264 VEELCRLL--VDNRLPVTYNCIARLE----HVDEELVGLLKKSGCWQVNFGIESGDPEVL 317

Query: 146 RFLGRNHNASEAIAAIH----LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +     H    A+ A+H    + +    R+    +  LP +        +  AL+  +D 
Sbjct: 318 KK----HRKYMALDAVHQKLKMVKTGGMRVKGLFMVGLPGEDEAAIRRTIDYALTLPLDE 373

Query: 202 LSLYQLTIEKGTLFYKMH-KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           +++ + T   G   Y+   + G+      ++    +       +   L   E   + F+ 
Sbjct: 374 INVTKFTPFPGAPIYENICQQGEFREDWPDMNCMNFVFIPHGMT---LEQLENLYNEFIR 430

Query: 261 AESLHNLNYWRYGDYI 276
                +  +W Y   +
Sbjct: 431 RFYRRSRIHWGYTKML 446


>gi|212224708|ref|YP_002307944.1| Hypothetical 2-methylthioadenine synthetase [Thermococcus
           onnurineus NA1]
 gi|212009665|gb|ACJ17047.1| Hypothetical 2-methylthioadenine synthetase [Thermococcus
           onnurineus NA1]
          Length = 425

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 16/235 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+  C YC      R  +   +++    + +        G R I       G        
Sbjct: 148 CLNACTYCA----TRFARGVLKSYKPELVVKWVKEALARGYREIQLSSEDTGCYGFDIGT 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGVQSLEE 142
           N+A +LD I     +     I +   NP+          + Y+   V   + L VQS + 
Sbjct: 204 NLAELLDEITS---IEGEFRIRVGMMNPNHAIKFLDELIEAYQDEKVYKFLHLPVQSGDN 260

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR +GR +   E    ++    +     ++ D+I   P +T   ++  ++       D
Sbjct: 261 EVLRRMGRTYTVEEFEEIVNEFRRKIPGLNLNTDIIVGFPGETEEAFQNTVELVKRVRPD 320

Query: 201 HLSLYQLTIEKGTL--FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +++ + +   GT+   +K      +   S  +      +   I   +     E+
Sbjct: 321 KINVSRYSPRPGTIAAKWKQLPGWKVKERSRLLHRLRLQIAYEINQNYVGREIEV 375


>gi|108759358|ref|YP_634573.1| B12 binding /radical SAM domain-containing protein [Myxococcus
           xanthus DK 1622]
 gi|2811129|gb|AAB97826.1| unknown [Myxococcus xanthus DK 1622]
 gi|108463238|gb|ABF88423.1| B12 binding/radical SAM domain protein [Myxococcus xanthus DK 1622]
          Length = 427

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 64/210 (30%), Gaps = 27/210 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C +C   F S  R       N     +       + +G R I  I     TP+ + 
Sbjct: 185 CIYACRFCQTPFMSKARFRHRSVAN-----VAHWARELRRSGRRDIRFI-----TPTSMS 234

Query: 86  ---------PQNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKA-GVNR 132
                       +  +L  + +       V       E  P  V     +  ++    + 
Sbjct: 235 YGTADESVNLDAVEALLAAVKEAMAPDGRVYYGTFPSEVRPEHVTPEALELLKRYVHNDN 294

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G QS  E+ L+   R H+    + A  +A       + D I  LP +     +  + 
Sbjct: 295 LIIGGQSGSERILQSTRRGHDVETVVRATRIAVECGFVPNVDFILGLPGEEPEDVDATVA 354

Query: 193 RALSYAVDHLSLYQLTIE--KGTLFYKMHK 220
                A     ++  T     GT F     
Sbjct: 355 LMEKLAGLGARVHGHTFMPLPGTPFRDAPP 384


>gi|219851947|ref|YP_002466379.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
 gi|219546206|gb|ACL16656.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
          Length = 360

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 75/229 (32%), Gaps = 19/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGTPSLIE 85
           C  +C YC   +        +   I++ +   +  R +    + +++ +G  G  P L +
Sbjct: 145 CPHRCGYC--QTPQIFGHCMRHRSIEAVVRAAERCRDV-RCVTPNALAYGSDGIHPRLDK 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQS 144
            +++   L G     T  S      E  P  +             N R+  G QS  ++ 
Sbjct: 202 VEHLLRRLSGAVYIGTFPS------EVRPEFITPEALDLICTYCSNTRLHFGAQSGSDRV 255

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME---LQRALSYAVDH 201
           L  LGR H  S    A+ L R        D+I  LP             ++      + H
Sbjct: 256 LTALGRGHTVSAVEEAVDLCREAGITPVVDMIVGLPCDDDESERATGKLIRWVADRGIVH 315

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +Q      T           +LP     +   +LT  +T +  +  
Sbjct: 316 A--HQFMPLPATRLAN--SAPRPLLPETVHMLGHLSLTGKLTGSWRIRH 360


>gi|187777464|ref|ZP_02993937.1| hypothetical protein CLOSPO_01031 [Clostridium sporogenes ATCC
           15579]
 gi|187774392|gb|EDU38194.1| hypothetical protein CLOSPO_01031 [Clostridium sporogenes ATCC
           15579]
          Length = 310

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 79/241 (32%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I     +++ + +        
Sbjct: 36  CPNRDGKVSKGGCIYCSERGSGDF--------AGDRNFKIYKQFEDIKKIMKEKWSSGKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAG 129
             +F   T +      +    +   +       V + I   P  ++       +   K  
Sbjct: 88  IAYFQAYTNTYAPVDILR---EKYEEAMNEKGVVALAIATRPDCLDEEVLNLIEELSKKI 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ +++ + + R +  +    A+   +     +    I+ LP +T      
Sbjct: 145 YIWVELGLQTVNDETAKIINRGYKLNVFEKAVKNLKERNIDIVVHTIFGLPGETKEDMIR 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  +  + L + K T   K+++ G+L        V+L     ++   + + 
Sbjct: 205 TVKYISKLDIQGVKFHLLHLLKDTPLVKLYESGNLKFLDMEEYVELICKAITLLPPNMVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|320588123|gb|EFX00598.1| elongator complex protein 3 [Grosmannia clavigera kw1407]
          Length = 539

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 68/313 (21%), Positives = 117/313 (37%), Gaps = 42/313 (13%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  V ITIE  P      +     + G  R+ +GVQSL E   R   R H  +       
Sbjct: 196 TKCVGITIETRPDYCLQPHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVAAVAETFC 255

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
           LA++   ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ 
Sbjct: 256 LAKDAGYKVVSHMMPDLPNVGMERDLDQFREYFENPAFRTDGLKIYPTLVIRGTGLYELW 315

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFL-----GAE--SLHNLNYW 270
           + G     + N  V   +L   I +        Y +     +     G E  +L  L   
Sbjct: 316 RTGRYQNYTPNGLV---DLVARILALVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALA 372

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKH--PESWLKMVRKNGHAVVEKE-FLSSEQQA 327
           R  D    G    +   V +  V I+  KH    + +++VR++  A    E FL+ E   
Sbjct: 373 RMKD---FG---TTCRDVRTREVGINEVKHKVRPNQVELVRRDYTANGGWETFLAYEDPK 426

Query: 328 DEFLMMGLRLREGISVKDW-EMLAGRNLDIECE---------------RNLQRQGF--IE 369
            + L+  LRLR+      + E L G+   +  E               +  Q QGF  + 
Sbjct: 427 QDILVGLLRLRKCSEKYTFREELVGQPTSLVRELHVYGTAVPVHARDPKKFQHQGFGTLL 486

Query: 370 RVQFSRLRCTQRG 382
             +  R+   + G
Sbjct: 487 MEEAERIARDEHG 499


>gi|297584113|ref|YP_003699893.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus selenitireducens
           MLS10]
 gi|297142570|gb|ADH99327.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus selenitireducens
           MLS10]
          Length = 516

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 66/202 (32%), Gaps = 22/202 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  +  G+E   +     ++ +R L           G          
Sbjct: 227 CDKFCTYC-----IVPFTRGKERS-RRPEDVIEEVRHLARNGYKEITLLGQNV-----NA 275

Query: 88  NIALILDGIAKNWTVSSNVEIT-------IEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               +LD   +   +  ++            ++P   +        K G  +  I L VQ
Sbjct: 276 YGKDLLDSSYRLADLLDDIRDIGIPRVRFTTSHPWDFDDELIDVIAKGGNMMEHIHLPVQ 335

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +   E +A     +   P   ++ D+I   P +T  Q++  L     
Sbjct: 336 SGNNDVLKIMNRKYTREEYVALADKIKEKIPHATLTTDIIVGYPNETEEQFQDTLSLVKE 395

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
            A D    Y  +  +GT    M
Sbjct: 396 MAFDAAYTYVYSAREGTPAAAM 417


>gi|90407491|ref|ZP_01215674.1| tRNA-i(6)A37 modification enzyme MiaB [Psychromonas sp. CNPT3]
 gi|90311412|gb|EAS39514.1| tRNA-i(6)A37 modification enzyme MiaB [Psychromonas sp. CNPT3]
          Length = 473

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 74/226 (32%), Gaps = 12/226 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F              +   L E+  + +  G R I+ +  G    S I      
Sbjct: 157 CSKYCTFCIVPYTRGEEVSRPVDDILLEVAQLAEQ-GVREINLL--GQNVNSYIGATFDG 213

Query: 91  LILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                      V+S   I       +NP   +      YR     V+ + L VQ+  ++ 
Sbjct: 214 KTCSFAELLRNVASIDGIDRLRYTTSNPIDFDDEIIDVYRDTPELVDFLHLPVQAGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A++    I   + + P ++   D I   P +T   ++  +        D  
Sbjct: 274 LSAMKRGHTAAQYKEKIVALKLVRPNLTLSSDFIVGFPNETDEDFQQTMDLIEEIGFDIS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             +  +   GT    M  D  L +  E +A   + +TQ        
Sbjct: 334 YSFIYSQRPGTPAADMPDDVSLQVKKERLARLQHAITQQALQIARR 379


>gi|330468268|ref|YP_004406011.1| Radical SAM domain-containing protein [Verrucosispora maris
           AB-18-032]
 gi|328811239|gb|AEB45411.1| Radical SAM domain-containing protein [Verrucosispora maris
           AB-18-032]
          Length = 456

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 70/240 (29%), Gaps = 26/240 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           CV  C +C      +   +    F    +  ++W       R +  + F   TP+ +   
Sbjct: 197 CVFSCRFC------QTPFMFSAKFRHRSVANVRWHVDRMRARGLRDVRF--ITPTALSYG 248

Query: 86  -------PQNIALILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVNR-IS 134
                     +  +L    +    +  V       E  P  V     +  +K   N  I 
Sbjct: 249 SQAEEPNLDAVEELLASCKEGIGPNGRVFFGSFPSEIRPEHVSRAALRLVKKYCANNNII 308

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +G QS  ++ L    R H   E   A  L      R++ D+I+ +P ++       L+ A
Sbjct: 309 VGAQSGSDRVLDAAKRGHGVEEVKRAARLGIEEGFRINVDMIFGMPGESEQDVADSLRLA 368

Query: 195 LSYAVDHLSLYQLTIE--KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              A     ++  T     GT +               V              H     E
Sbjct: 369 GELAEVGARIHAHTFMPLPGTPWRDAPPGDVDPETIRQVDRLSQRGA---LYGHWQKQRE 425


>gi|315229966|ref|YP_004070402.1| hypothetical protein TERMP_00202 [Thermococcus barophilus MP]
 gi|315182994|gb|ADT83179.1| hypothetical protein TERMP_00202 [Thermococcus barophilus MP]
          Length = 424

 Score = 74.2 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP-SLIEP 86
           C   C YC    +++ +K+     I   +   + MR +   R I+   F  G+P ++++ 
Sbjct: 174 CPFGCYYC-QTPYIKGFKMRHRP-IDQIVKYSKRMRDM---RYITPNAFAYGSPGAILKL 228

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
             +  +L  +         +       E  P  V+    +   K   NR +++G QS ++
Sbjct: 229 DKLEALLKALQPLRKEGRRLFYGTFPSEVRPEFVKPETLELLIKYADNRRLAIGAQSGDD 288

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
             L+ + R H     + A+            D I  LP ++         L + +     
Sbjct: 289 VMLKAMHRLHTVRYVMEAVEYMIEYGIEPVVDFIVGLPNESEESQRKSIELMKWIMRKGG 348

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  +      GT + +        L  E          +           ++S
Sbjct: 349 KVRAHYFMPLPGTPWAR---CKPSPLSEEMKKFLGRMAAKGKIEGAWGIQIQLS 399


>gi|163757739|ref|ZP_02164828.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
           DFL-43]
 gi|162285241|gb|EDQ35523.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
           DFL-43]
          Length = 480

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                ++  ++E + +    G R ++    ++    G  S 
Sbjct: 184 CDKFCTFC---VVPYTRGAEVSRPVERIMSEAERLAA-AGVREVTLLGQNVNAWHGQGSD 239

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  +A    +      T  ++P  ++      +R     +  + L VQS  
Sbjct: 240 GREWGLGELVHRLAAIEGIDRIRYTT--SHPRDMDDALINAHRDLPELMPYLHLPVQSGS 297

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A+E I  +   R   P ++   D I   P +T   +E  ++       
Sbjct: 298 DRILKAMNRRHTAAEYIRLVERIRMARPDIALSGDFIVGFPGETDEDFEDTMRLIREVNY 357

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
                ++ +I  GT    M    D
Sbjct: 358 AAAFSFKYSIRPGTPGAGMDGQVD 381


>gi|331084853|ref|ZP_08333941.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410947|gb|EGG90369.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 314

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 77/228 (33%), Gaps = 14/228 (6%)

Query: 28  CVKK-----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +     C +C            Q+   Q       ++ +        + +F   T +
Sbjct: 33  CPNRINGGGCTFCAEVGTGFESLSNQKTVTQQLNENKAFISKKYKAEKFIA-YFQNYTNT 91

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGV 137
            +   +    +   A    +   +EI+I   P  +  +  +  ++          + LG+
Sbjct: 92  FMPLSDFQNYMKEAASQRDI---IEISISTRPDCIRKDYMEVLKQIKETYSVEITLELGL 148

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q++   +L  + R H  +E + A+   +     +   +I  LP  T        +   + 
Sbjct: 149 QTVNYHTLDDIQRGHGLAEYLDAVRCIQMYDFTICTHVILNLPGDTRRDAIETAKILSAL 208

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +  + ++ L I K TL    +++G + + S+   +          S 
Sbjct: 209 RIPIVKIHSLYIAKNTLLCNAYENGTIAVCSKEEYLQRLADFLEYLSP 256


>gi|219116634|ref|XP_002179112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409879|gb|EEC49810.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 544

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 75/377 (19%), Positives = 124/377 (32%), Gaps = 67/377 (17%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +   + + Q      Q    
Sbjct: 95  CPHIAYTGNVCVYCPGGPDSDFEYSTQAYTGYEPTSMRAIRARYDPYSQVKGRVAQLRAI 154

Query: 65  LTGPRSISSIFFGGGTPSL---IEPQNIALILDG-------------IAKNWTVSSNVEI 108
                 +  I  GG   SL    +   I  + D                    V+  + I
Sbjct: 155 GHTVDKVEFIVMGGTFLSLDKEYKDYFIRNLHDALSGYHSQTVEESVRYSEQAVTKCIGI 214

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      + +     G  RI +GVQS+ E   R   R H  +    +  LA++  
Sbjct: 215 TIETRPDYCLKPHLEEMLSYGCTRIEIGVQSIYESVARETNRGHTVAAVSHSFQLAKDCG 274

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP     +     +       +  D + LY   + +GT  Y++ K G   
Sbjct: 275 FKVVTHMMPDLPNMGYERDLEGFKEYFENPMFRSDGMKLYPTLVIRGTGLYELWKTGRYQ 334

Query: 226 LPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES---LH-NLNY-----WRYGD 274
             + +  V    LT  + S        Y +     +   S    H NL        R  D
Sbjct: 335 NYTPDQLV---ELTAQVLSLIPPWTRLYRVQRDIPMPLVSSGVEHGNLRELALQKMREQD 391

Query: 275 --YIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFL 331
              + I     SR +VG  ++  S+       +++VR++  A    E FLS E    + L
Sbjct: 392 LPCLDI----RSR-EVGMKQIHHSVTPDQ---VELVRRDYVANGGWETFLSYEDPTQDIL 443

Query: 332 MMGLRLREGISVKDWEM 348
           +  LRLR+       + 
Sbjct: 444 IGLLRLRKTSPAAWLKE 460


>gi|153953746|ref|YP_001394511.1| methyltransferase [Clostridium kluyveri DSM 555]
 gi|219854364|ref|YP_002471486.1| hypothetical protein CKR_1021 [Clostridium kluyveri NBRC 12016]
 gi|146346627|gb|EDK33163.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
 gi|219568088|dbj|BAH06072.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 289

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 90/238 (37%), Gaps = 20/238 (8%)

Query: 28  CVK-KCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   KC +C+     + R K  +E +   +       RQ+ G   +  IF   G   ++ 
Sbjct: 25  CAHNKCTFCNMYKAKKFRIKSLEEVYGDLYEA-----RQMYG--HVERIFLADGDSLVLP 77

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEE 142
            + +  IL  I +         ++  A P  +        +  ++ G+    +G++S  +
Sbjct: 78  MEKLTQILLKIKEL--FPECKRVSAYATPGDILRKSPEELKELKELGIGIFYMGIESGSD 135

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVD 200
             L+ + +   + E I A    +    ++S   I  +  +           +   +   D
Sbjct: 136 LILKEIQKGVTSEEIIEAGQKIKKSGIKISVTFISGIGGKDKWQENAMESARVITAINPD 195

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           ++ L  L +E GT  Y     G   +L  E + ++   L ++I + + +     SNH+
Sbjct: 196 YVGLLTLMVEPGTKMYDDINSGKFKILSPEEIMLETRELIKNIHTTNCVFR---SNHA 250


>gi|303325827|ref|ZP_07356270.1| radical SAM protein, family [Desulfovibrio sp. 3_1_syn3]
 gi|302863743|gb|EFL86674.1| radical SAM protein, family [Desulfovibrio sp. 3_1_syn3]
          Length = 351

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 58/149 (38%), Gaps = 6/149 (4%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQSLEE 142
           +  + D +    T+     + +   P  +  +      +AG         + LG+QS  +
Sbjct: 130 LERLQDLLHAVATLPDCCGLAVGTRPDCLSPSKLDALLRAGAEAGVAEIWLELGLQSAHD 189

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +L  + R H A+ A  A+  A      +   L+  LP +    +   +  A+S  +  L
Sbjct: 190 ATLARVNRGHTAACAAKAVAEAAGRGLLVCGHLMAGLPGEGEAAFLESVDWAVSLPLHGL 249

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            L+ + + +GT   + ++DG       + 
Sbjct: 250 KLHNVYVPEGTELARRYRDGRYQPLERDE 278


>gi|148269547|ref|YP_001244007.1| putative radical SAM protein [Thermotoga petrophila RKU-1]
 gi|147735091|gb|ABQ46431.1| conserved hypothetical radical SAM protein [Thermotoga petrophila
           RKU-1]
          Length = 303

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 92/232 (39%), Gaps = 9/232 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    +       I+  + EM+   +  G +   + +F   + +    + +  
Sbjct: 41  CIYCD--ATGSGFTTLMRLPIREQVMEMKRKYEKRGIKKFIA-YFQSFSNTYAPVEVLR- 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +   +     S V++++   P  V     + F+ ++K     + LG+Q+   ++L+ +
Sbjct: 97  --ERYEEALVDDSIVQLSVSTRPDLVSERVLDLFEEFKKRVDVSVELGLQTANYRTLKKI 154

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R+H  +E + A    +     +   +I  LP   M       +   +  VD + L+ L 
Sbjct: 155 NRDHTLAEFVDAAVRVKRRGIELVVHVILNLPWDDMEDVVETAKILSALDVDGVKLHSLY 214

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           + + T   +M+K G++ + S    +D         S + +    +++    G
Sbjct: 215 VVERTKLAEMYKKGEIKICSLEEYIDRAITFLEYLSPNVVIHRLVADPPRKG 266


>gi|225678323|gb|EEH16607.1| histone acetyltransferase [Paracoccidioides brasiliensis Pb03]
          Length = 583

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 122/362 (33%), Gaps = 55/362 (15%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTSNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H     +    L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVVETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  VD+     ++        Y +     +     G E  +L  L   R  D   +
Sbjct: 361 NYTPNALVDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---L 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 RE 339
           R+
Sbjct: 476 RK 477


>gi|226290627|gb|EEH46111.1| elongator complex protein [Paracoccidioides brasiliensis Pb18]
          Length = 583

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 122/362 (33%), Gaps = 55/362 (15%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTSNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H     +    L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVVETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVVSHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  VD+     ++        Y +     +     G E  +L  L   R  D   +
Sbjct: 361 NYTPNALVDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---L 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 RE 339
           R+
Sbjct: 476 RK 477


>gi|322499278|emb|CBZ34351.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 709

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 47/287 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ F      + Q     S             +  
Sbjct: 213 CPKDCHYCPNQPGIARSYLLKEPGVLRGFRNGWDPISQFYDRASALENNGHVVDKIELII 272

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN------------------------VEITIEA 112
            GGT S    +     +           +                        + IT+E 
Sbjct: 273 LGGTFSFYPQRYAEEFMTASFYAANTYYDSAPLRPMRSLAEELTMNEDARCRIIGITVET 332

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     + +R  GV R+ LG+Q L++  L  + R+   ++ + AI    +   ++ 
Sbjct: 333 RPDYISARELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAIQRLLDAGFKVD 392

Query: 173 FDLIYALPKQTMTQ---WEMELQRA--LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +  LP  +  +       L  A   S+ VD   +Y       T   + +  G     
Sbjct: 393 AHWMPDLPGSSFEKDMALFETLFSAENESFQVDQWKVYPTATVPFTKISEWYAQGKYKPY 452

Query: 228 SE-NVAVDLYNLTQSITSAHGLH------AYEISNHSFLGAESLHNL 267
           +E +    +  L   I               +I     +G E   NL
Sbjct: 453 AELDNGAYMVKLLVYIMEHCPYRIRLNRIIRDIPTTYIMGGEKRCNL 499


>gi|257062817|ref|YP_003142489.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256790470|gb|ACV21140.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 321

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 23/302 (7%)

Query: 28  CV-KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CDF  H+   ++  E+ I++     +  R          I  G G P  +  
Sbjct: 25  CPYNKCAFCDFYKHMTYREIPLED-IEA-----ELARVSNAGGKPERIMLGDGNPLWLPF 78

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  I++ I       ++           S   +      + G     +G++S  +  L
Sbjct: 79  DRLKKIVEMIEHYLPSCTTLCSDASVLAIESKTDDELAWLARHGYRMAYVGIESGLDDVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLS 203
            F+ ++H   +A   I             +I       + +                H+ 
Sbjct: 139 EFMDKDHLNDQAREQIARLHKAGIDFGAHIITGAAGNGRGIENARATAALINELRPVHIC 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            + L +   T      +DG+ V  S    +       S+        +E    +FL    
Sbjct: 199 DFSLYVASVTELGLKEEDGEFVRASMLENMREMREFVSLLDEDLDLFFEGYFSAFLRKP- 257

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
                        G+GPG+   V      V  S+    +  L+  R+N  A ++    S+
Sbjct: 258 -------EGK---GVGPGSKVIVNTAGEFVRKSLL--LKGDLRTERENILAGLDGYIKST 305

Query: 324 EQ 325
           E+
Sbjct: 306 EE 307


>gi|146087474|ref|XP_001465835.1| acetyltransferase-like protein [Leishmania infantum JPCM5]
 gi|134069935|emb|CAM68264.1| acetyltransferase-like protein [Leishmania infantum JPCM5]
          Length = 709

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 87/287 (30%), Gaps = 47/287 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ F      + Q     S             +  
Sbjct: 213 CPKDCHYCPNQPGIARSYLLKEPGVLRGFRNGWDPISQFYDRASALENNGHVVDKIELII 272

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN------------------------VEITIEA 112
            GGT S    +     +           +                        + IT+E 
Sbjct: 273 LGGTFSFYPQRYAEEFMTASFYAANTYYDSAPLRPMRSLAEELTMNEDARCRIIGITVET 332

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     + +R  GV R+ LG+Q L++  L  + R+   ++ + AI    +   ++ 
Sbjct: 333 RPDYISARELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAIQRLLDAGFKVD 392

Query: 173 FDLIYALPKQTMTQ---WEMELQRA--LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +  LP  +  +       L  A   S+ VD   +Y       T   + +  G     
Sbjct: 393 AHWMPDLPGSSFEKDMALFETLFSAENESFQVDQWKVYPTATVPFTKISEWYAQGKYKPY 452

Query: 228 SE-NVAVDLYNLTQSITSAHGLH------AYEISNHSFLGAESLHNL 267
           +E +    +  L   I               +I     +G E   NL
Sbjct: 453 AELDNGAYMVKLLVYIMEHCPYRIRLNRIIRDIPTTYIMGGEKRCNL 499


>gi|86747716|ref|YP_484212.1| tRNA-i(6)A37 modification enzyme MiaB [Rhodopseudomonas palustris
           HaA2]
 gi|123408933|sp|Q2J2K9|MIAB_RHOP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|86570744|gb|ABD05301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopseudomonas
           palustris HaA2]
          Length = 468

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 14/217 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                + + L +++ +    G R ++    ++    G    
Sbjct: 166 CDKFCTFC---VVPYTRGAEVSRPVAAILADVERLADH-GVRELTLIGQNVNAYHGDGPD 221

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  +L  +A    +      T  ++P+ V+ +    +R     +  + L VQS  
Sbjct: 222 GRPWTLGRLLQRLAAVPGIVRLRYST--SHPNDVDDDLIAAHRDLDALMPFVHLPVQSGS 279

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A++    I    A       S D I   P +T   +E  L        
Sbjct: 280 DRILAAMNRKHTAADYRRVIDRFRAVRPEIAFSSDFIVGFPGETDADFEATLALVTQIGY 339

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
                ++ +   GT   +M +     +  E +     
Sbjct: 340 AGAYSFKYSPRPGTPAAEMPEMVPAAVMDERLERLQQ 376


>gi|148653672|ref|YP_001280765.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Psychrobacter
           sp. PRwf-1]
 gi|229890621|sp|A5WGM4|MIAB_PSYWF RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|148572756|gb|ABQ94815.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychrobacter sp. PRwf-1]
          Length = 490

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 75/224 (33%), Gaps = 16/224 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R I+ +      + G      +
Sbjct: 198 CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQ-GVREITLLGQNVNGYRGEK----D 252

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     V     I     +P     +  + Y K    V+ + L VQS   
Sbjct: 253 DGSICRFAELLHYVAHVDGIERIRYTTSHPLEFTDDIIEAYAKLPQLVSHLHLPVQSGSN 312

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + RNH     I  I+  +A      +S D I   P +T   +   L  A +   D
Sbjct: 313 KILAAMKRNHTIDVYINQINKLMAVRPDMHLSSDFIIGFPGETEEDFLDTLNLAKALDFD 372

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           H   +  +   GT   ++  D  L    E +A+    +  S   
Sbjct: 373 HSYSFIYSKRPGTPASELPDDVSLATKKERLAIFQKVIRDSTLK 416


>gi|57641347|ref|YP_183825.1| hypothetical protein TK1412 [Thermococcus kodakarensis KOD1]
 gi|57159671|dbj|BAD85601.1| hypothetical protein, conserved, radical SAM superfamily fused to
           B12-binding domain [Thermococcus kodakarensis KOD1]
          Length = 424

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP-SLIEP 86
           C   C YC    +++ +++            +++ +++   R I+   F  G+P ++++ 
Sbjct: 174 CPFGCYYC-QTPYIKGFRMRHRP----IDQIVKYSKRMKDMRYITPNAFAYGSPGAILKL 228

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
             +  +L  +         +       E  P  V     +       NR +++G QS ++
Sbjct: 229 DKLEALLKALQPLRKEGRRLFYGTFPSEVRPEFVLPETLELLIDYADNRRLAIGAQSGDD 288

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
             L+ + R H       A+            D I  LP +T         L + +     
Sbjct: 289 AMLKAMHRLHRVEHVQRAVEYMLEYGFEPVVDFIVGLPNETRESQRKSIELMKWIMAKGG 348

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  +      GT + +        L  E          +           E+S
Sbjct: 349 KVRAHYFMPLPGTPWSR---CRPSPLSDEMKKFLGRMAAKGKIEGSWGKQIELS 399


>gi|240274071|gb|EER37589.1| histone acetyltransferase [Ajellomyces capsulatus H143]
 gi|325095547|gb|EGC48857.1| histone acetyltransferase [Ajellomyces capsulatus H88]
          Length = 583

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 124/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTKNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVISHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 REGISVKDWE-MLAGR 352
           R+      +   L G+
Sbjct: 476 RKCSKTHTFRPELTGQ 491


>gi|225557816|gb|EEH06101.1| histone acetyltransferase [Ajellomyces capsulatus G186AR]
          Length = 583

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 124/376 (32%), Gaps = 56/376 (14%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTKNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 301 FKVISHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWRTGRYK 360

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGDYIGI 278
             + N  +D+     ++        Y +     +     G E  +L  L   R  D    
Sbjct: 361 NYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALSRMKD---F 416

Query: 279 GPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMGLRL 337
           G               +  +  P   +++VR++  A    E FL+ E    + L+  LRL
Sbjct: 417 GTTCRDVRTREVGINEVKNKIRPSQ-VELVRRDYTANGGWETFLAYEDPKQDILIGLLRL 475

Query: 338 REGISVKDWE-MLAGR 352
           R+      +   L G+
Sbjct: 476 RKCSKTHTFRPELTGQ 491


>gi|169831317|ref|YP_001717299.1| putative radical SAM protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638161|gb|ACA59667.1| conserved hypothetical radical SAM protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 307

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 22/231 (9%)

Query: 28  CVKK--------CPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +        C +C   S        +  E+ + +     +  R+  GP      +  
Sbjct: 32  CPNRDGTVGRDGCTFCHNPSFGLFADQALPLEDQLTA--ASARLRRRHPGPLRF-LAYLQ 88

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---IS 134
             T +      +  +      +  V   V + I   P  V                  + 
Sbjct: 89  NYTGTYGPLDRLKAVYGAAVAHPDV---VGLAIGTRPDCVPDPVLDLIGSYAARWHVWLE 145

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
            G+QS+  ++L  + R H A + + A+  AR     +   +I  LP +T        +  
Sbjct: 146 YGLQSIHNRTLERINRGHTAGQFLDAVARARGRGIFVCAHVILGLPGETPEDTVETARAL 205

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               VD + ++ L + +GT      + G + + S     +           
Sbjct: 206 TQAGVDGVKVHHLQVIRGTPLEAEWRSGRVDVLSP---AEYVRWAADFLEH 253


>gi|94986835|ref|YP_594768.1| Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731084|emb|CAJ54447.1| predicted Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00]
          Length = 298

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 2/132 (1%)

Query: 97  AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGVQSLEEQSLRFLGRNHNA 154
           A+   +     I++   P  +         +       +  GVQSL +++L  + R H++
Sbjct: 103 AQIKGLQDVAGISVGTRPDCLTNKKLSLIVEMPYLEKWVEFGVQSLHDETLIKIKRGHSS 162

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             +  AI  A N   ++   +++ LP +T T     + R  S  +  +  + + + K T+
Sbjct: 163 KCSEQAIIQAANAGLQVCAHVMFGLPGETPTHMLQTIDRLNSLPIHGIKFHNVYVCKNTI 222

Query: 215 FYKMHKDGDLVL 226
             K    G+   
Sbjct: 223 LEKEFNAGNYYP 234


>gi|304404972|ref|ZP_07386632.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9]
 gi|304345851|gb|EFM11685.1| conserved hypothetical protein [Paenibacillus curdlanolyticus YK9]
          Length = 321

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      R             +T+   ++  +    P +    +F   T +    + 
Sbjct: 60  CTFCS----ARGSGDFAGRRRDDLVTQFNTIRDRQHQKWPNAKYIGYFQAYTNTYAPVEE 115

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + I +   V   V ++I   P  +  +      +        + +G+Q++ E + 
Sbjct: 116 LREYFEVILEQPGV---VGLSIATRPDCLPDDVIDYLAELNERTYLWLEMGLQTIHESTS 172

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+ +    A+   R    R+   +IY LP++T        +      V  + ++
Sbjct: 173 ELINRAHDTACYEDAVRRLRARGIRVCAHIIYGLPQETHQMMMDTCRAVARMDVQGIKIH 232

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T   K H+ G L     +  + L   +  +     +  
Sbjct: 233 LLHLMRKTPMVKQHEAGLLRFLEMDEYIGLIADSLELLPPEMIVH 277


>gi|116198545|ref|XP_001225084.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88178707|gb|EAQ86175.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 579

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 42/240 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              +  ++ L
Sbjct: 115 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVDQLKAL 174

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVSSN-------------VEI 108
                       GGT   +      + I+ + + ++   T++ +             V I
Sbjct: 175 GHSVDKVEFIIMGGTFMSLPESYRDEFISQLHNALSGYGTLNVDEAVRAGEQSSIKCVGI 234

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H  +       L+++  
Sbjct: 235 TIETRPDYCLQPHLSSMLRYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLSKDAG 294

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ + G   
Sbjct: 295 FKVVSHMMPDLPNVGMERDLDQFKEYFESPAFRTDGLKIYPTLVIRGTGLYELWRTGRYQ 354


>gi|329736221|gb|EGG72493.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis VCU028]
          Length = 514

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 78/231 (33%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +R+L                S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYQEITLLDQNVNSYGKDI 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           + +   + D +     +         ++P        +   K G  V  I L VQS   Q
Sbjct: 277 EGLDYELGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGNNQ 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L        +H
Sbjct: 337 VLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQFEETLSLYDDVQFEH 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              Y  +   GT   KM  +  L +  E +      +   I S   +  YE
Sbjct: 397 AYTYLYSQRDGTPAAKMKDNVPLEVKKERLQRLNKKVG--IYSQQAMSQYE 445


>gi|258406343|ref|YP_003199085.1| hypothetical protein Dret_2223 [Desulfohalobium retbaense DSM 5692]
 gi|257798570|gb|ACV69507.1| conserved hypothetical protein [Desulfohalobium retbaense DSM 5692]
          Length = 329

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 73/233 (31%), Gaps = 14/233 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  S     +  +   +       +   +          +    
Sbjct: 31  CPNRDGTLSRHGCIFCN-PSGSGTGQAAEGRTLAEQWDGWRDRFRRRYKARRFLAYLQSF 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--SLGV 137
           + S       A +LD +     VS    I I   P  +E           +  +   +G+
Sbjct: 90  SNSYGPVHRFAGLLDQLRALPDVSG---ICIGTRPDCLEPAKLDLLGDLDLPEVWLDIGL 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +++L  + R H+A+   A +  A     ++   LI  LP +T   +   ++     
Sbjct: 147 QSSNDETLARINRGHDAATFAATVRAAAARGLKICAHLIAGLPGETEPDFLETVRFVNEL 206

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            V  +  + L +   T   +  + G  V PS +          +      +  
Sbjct: 207 PVHGVKFHNLYVCHNTPLAEWFEAGRYVPPSRDDYCRWLAQGLADLRQDIVIH 259


>gi|32265988|ref|NP_860020.1| hypothetical protein HH0489 [Helicobacter hepaticus ATCC 51449]
 gi|32262037|gb|AAP77086.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 320

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 81/223 (36%), Gaps = 27/223 (12%)

Query: 32  CPYCD---F-NSHVRRYKVGQENFIQSF---------LTEMQ---WMRQLTGPRSIS--- 72
           C YCD   F  S ++  K+ +     S          L +++   +       R      
Sbjct: 43  CIYCDNESFSPSLIKLDKISEVKMNFSLTHNPLLQKQLKQLEEQFYWHSEFHQRKFGVCK 102

Query: 73  -SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RK 127
             I+F   T +      +  + D       V   V ++I      V+    +      +K
Sbjct: 103 YMIYFQSYTNTYAPYSTLKALYDKALSFPNV---VGLSIGTRIDCVKDEVLELLGEYVKK 159

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
                +  G+QS+ + +L    R H+ + A       R    ++   LIY LP++T    
Sbjct: 160 GKEIWLEYGIQSVYDNTLTITNRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMM 219

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
              L+  L + +D + ++ L +  GT   K++KDG     +  
Sbjct: 220 LYSLESVLEWGIDGIKIHPLYVVNGTRLAKLYKDGKYEPITME 262


>gi|257456801|ref|ZP_05621985.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema vincentii ATCC
           35580]
 gi|257445807|gb|EEV20866.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema vincentii ATCC
           35580]
          Length = 456

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C   C YC                ++S L E+ ++    G + I+ +      + G  P+
Sbjct: 165 CNNFCTYC---IVPYIRGREISRPVESILDEITFLSG-KGVKEITLLGQNVNSYHGIDPT 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                N   +L  +++  T    ++    I ++P  +     +   +       + L VQ
Sbjct: 221 SGSKVNFPALLRAVSQTCTKQDVIKWIRFISSHPKDLSDELIEVMAEDPRVCKSLHLPVQ 280

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           +  ++ L  + R +   + +  +   RN  P +    D++   P +T  ++E  L    +
Sbjct: 281 NGSDEVLARMNRGYTVEQYLKIVEKLRNRIPNIVLTTDILIGFPGETQAEFEKTLDLMRT 340

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D   +Y     +GT  Y   
Sbjct: 341 VQFDSAFMYHYNPREGTKAYNFP 363


>gi|225018731|ref|ZP_03707923.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum
           DSM 5476]
 gi|224948459|gb|EEG29668.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum
           DSM 5476]
          Length = 409

 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 74/198 (37%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     + + +    +   + L   + +R L        +  G    S     
Sbjct: 133 CDRYCTYC----IIPKARGPVRSKQMAELR--EELRDLAANGYKEVVLVGINLSSYGRDL 186

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D +    +V     + +    P  +   + Q          +  L +QS  + +
Sbjct: 187 ENTRLIDAVRLACSVDGIERVRLGSLEPELLTGEDIQTLASLPKFCPQFHLSLQSGCDAT 246

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R+++++E +  +   R  F    ++ D++   P +T  ++   L  A    +   
Sbjct: 247 LKRMNRHYDSAEYLRIVQDIRTAFDNPSITTDIMVGFPGETEEEFAQSLAFAERVGLAKA 306

Query: 203 SLYQLTIEKGTLFYKMHK 220
            ++  ++ +GT   +M +
Sbjct: 307 HVFPYSVREGTAAARMPQ 324


>gi|330935956|ref|XP_003305194.1| hypothetical protein PTT_17968 [Pyrenophora teres f. teres 0-1]
 gi|311317896|gb|EFQ86708.1| hypothetical protein PTT_17968 [Pyrenophora teres f. teres 0-1]
          Length = 422

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 22/249 (8%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V ITIE  P      +     + G  R+ +GVQSL E   R   R H  S       LA
Sbjct: 81  CVGITIETRPDYCLDQHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVSAVAKTFCLA 140

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  LP   M +   +        S+  D L +Y   + +GT  Y++ + 
Sbjct: 141 KDAGFKVVSHMMPDLPNVGMERDLDQFVEYFSNPSFRTDGLKIYPTLVIRGTGLYELWRT 200

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL-----GAE--SLHNLNYWRYGD 274
           G     + N  +D+     ++        Y +     +     G E  +L  L   R  D
Sbjct: 201 GRYKNYTPNALIDIVARILALVPPWTRI-YRVQRDIPMPLVTSGVENGNLRELALARMKD 259

Query: 275 YIGIGPGAHSRVKVGSHRVAISIEKH---PESWLKMVRKNGHAVVEKE-FLSSEQQADEF 330
               G    +   V +  V I+  KH   P+  +++VR++  A    E FL+ E    + 
Sbjct: 260 ---FG---TTCRDVRTREVGINEVKHKIRPDQ-VELVRRDYTANGGWETFLAYEDPKQDI 312

Query: 331 LMMGLRLRE 339
           L+  LRLR+
Sbjct: 313 LIALLRLRQ 321


>gi|313904023|ref|ZP_07837403.1| conserved hypothetical protein [Eubacterium cellulosolvens 6]
 gi|313471172|gb|EFR66494.1| conserved hypothetical protein [Eubacterium cellulosolvens 6]
          Length = 301

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 78/244 (31%), Gaps = 28/244 (11%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSI 71
           C  +        C +C      DF +         +  I+    ++       +   +  
Sbjct: 29  CPNRDGRVGTGGCTFCSEGGSGDFAASF----CPIDEQIEEARKKVDAKIPASIPPDQRK 84

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
              +F   T +     ++  + +           V +++   P  +E    +  R+  + 
Sbjct: 85  YIAYFQSFTGTY---SDVDRLREIFTTALNREEIVGLSVGTRPDCLEEEKVEMLRELNMK 141

Query: 132 R---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           +   + LG+Q++ +++   + R +       A    +     +   +I  LP +T     
Sbjct: 142 KPVWVELGLQTIHQETADRVHRGYRLEVFEDAYRRLKAAGLTVIVHVILGLPGETKEMML 201

Query: 189 MELQRALSYAV--DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             ++   +     D + L  L I KGT   K +++    L +     +       +   H
Sbjct: 202 ETVRYLAALRPELDGIKLQLLHILKGTALAKEYEEKPFGLFTPESYCETVVDCLKLLPEH 261

Query: 247 GLHA 250
            +  
Sbjct: 262 TVIH 265


>gi|297616818|ref|YP_003701977.1| hypothetical protein Slip_0628 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144655|gb|ADI01412.1| conserved hypothetical protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 320

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 15/227 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C YC              N+I   +       ++ +  G R   + +F   T + +  + 
Sbjct: 44  CIYCG---EEGSGFECLPNWIGVKEQLERNKAYIGRNYGSRKFIA-YFQAFTNTYLPLET 99

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQ 143
            A  ++    +  +   + ++I   P  +  +      +    R     I LG+Q++  +
Sbjct: 100 FAQNIEAAVGDPDI---IGLSISTRPDCISDDYLDRLAEITRGRELAVDIELGLQTVNYR 156

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  + R H  +E I A+   +     +   LI  LP           +   +  V ++ 
Sbjct: 157 TLAKINRGHTLAEFIDAVLRVKQRDFAVCAHLILNLPGDEEIDVVENAKVLSALGVQYVK 216

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+ L I KGT+  +M++ G++ + S +  V+             +  
Sbjct: 217 LHALYILKGTVLGEMYERGEVQIISLDEYVERVIAFLEYLHPDVVIQ 263


>gi|118580892|ref|YP_902142.1| magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Pelobacter propionicus DSM 2379]
 gi|118503602|gb|ABL00085.1| Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Pelobacter propionicus DSM 2379]
          Length = 484

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 83/239 (34%), Gaps = 25/239 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R Y+     ++      + ++  L    +I  +     T +L    
Sbjct: 214 CPYTCSYCDRSVFRRSYRYNSPQYM------LNYLLHLRQRFNIRHVNIYDDTFTL---- 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +LD      +    +     A    ++       ++AG   ISLG+++ + Q L+ 
Sbjct: 264 KRQRVLDFCQLKISSGLKMTFNCAARTEQLDREMLVQLKRAGCWMISLGIETGDPQLLQR 323

Query: 148 LGRNHNASEAIA--------AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             R++  S+ +          + L +    R+    +  LP +T       ++   S  +
Sbjct: 324 -HRSYLPSQVVENPLQNIRETVLLIKECGIRVKGLFMMGLPGETGESIRQSMEYVFSLPL 382

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLV------LPSENVAVDLYNLTQSITSAHGLHAYE 252
           D  +L +LT   G   Y+  ++          + + N     +  T+       L  Y 
Sbjct: 383 DDFNLSKLTPFPGAPMYRDIRNHGSFDETWELMNAANFTFIPHGFTREELEGLHLEFYR 441


>gi|296134094|ref|YP_003641341.1| hypothetical protein TherJR_2603 [Thermincola sp. JR]
 gi|296032672|gb|ADG83440.1| conserved hypothetical protein [Thermincola potens JR]
          Length = 324

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 81/251 (32%), Gaps = 36/251 (14%)

Query: 23  VHWPF-CVKK--------CPYCD-----F----NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           V+ P  C  +        C +CD     F    N+   R ++ +    + F+      + 
Sbjct: 29  VNIPGTCPNRDGVLGHGGCIFCDEEGSGFECLPNTLTVREQIRENK--KFFMKRFHAQKF 86

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           +         +F   T + +           + +       + I++   P  +       
Sbjct: 87  IA--------YFQAFTNTYLP---FDRFCSNMREAVEDEDIIGISVSTRPDCINDAYLDF 135

Query: 125 YRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                  R     I LG+Q++   +L+ + R H  +E I A+   +     +   +I  L
Sbjct: 136 AASLQRERNLAIDIELGLQTVNYHTLQKINRGHGLAEFIDAVLRIKQRGFAVVSHIILNL 195

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P    T      +   +  VD++ L+ L I K T+   M+  G+  + S    V      
Sbjct: 196 PWDDETDVIENAKILSALGVDYVKLHSLYIVKRTVLGDMYSRGEFKVISLEEYVRRVVTF 255

Query: 240 QSITSAHGLHA 250
                   +  
Sbjct: 256 LEYLDPAIVIQ 266


>gi|229916467|ref|YP_002885113.1| hypothetical protein EAT1b_0737 [Exiguobacterium sp. AT1b]
 gi|229467896|gb|ACQ69668.1| conserved hypothetical protein [Exiguobacterium sp. AT1b]
          Length = 324

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 29/221 (13%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEM-------QWMRQLTGPRSIS 72
           C  +        C +C           G  +F  +    +       +         +  
Sbjct: 35  CPNRDGRVSKGGCTFCS--------DDGSGDFAGNACDPIPVQFAEVKARLHRKWKSAKY 86

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             +F   + +    + +  + +   K       V ++I   P  +  +      +     
Sbjct: 87  IAYFQAFSNTYAPVERLRELYEPALKE---DGVVGLSIATRPDCLPDDVVAYLAELNERT 143

Query: 133 ---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ + + + + R H+    +  +   R    R+   +I  LP +T      
Sbjct: 144 SLWVELGLQTVHDTTAKKINRGHDYQSFLTGLAKLRRHNIRVCVHIINGLPGETPEMMLD 203

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             +      +  + ++ L + K T   + ++ G L L  E+
Sbjct: 204 TAREVAKMDIQGIKIHLLHVLKHTPLARQYEKGLLDLMEED 244


>gi|258591106|emb|CBE67401.1| Radical SAM domain protein precursor [NC10 bacterium 'Dutch
           sediment']
          Length = 453

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 11/224 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    + + Y+      +   +T +           I          + +   
Sbjct: 207 CHHRCHFCLLKMYGKGYRKKDPEQVVHEVTHLVREAGAKTGYFIDL------EFTAVRDD 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D   +  +     E   +     V+    +  ++AG   I  GV+S   + L  
Sbjct: 261 ----VRDLCERLVSAGLPFEWACQTRADYVDGPLLKLMKRAGCRLIHFGVESGSPRILAA 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     +    I   +          ++  P +T    E  +  A   +  + S + +
Sbjct: 317 TNKRITLEQIERGIAETKQSGIDQLCFFMFGFPGETAGDMEATIAFAKRLSPTYASFHAV 376

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           T   GT  Y+M    +L  P          + Q+I +      Y
Sbjct: 377 TPYMGTKLYEMSGSSELF-PEVLSKEHDPLILQAIANRAFREFY 419


>gi|154337986|ref|XP_001565219.1| acetyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062266|emb|CAM36654.1| acetyltransferase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 618

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 83/263 (31%), Gaps = 41/263 (15%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ F      + Q     S             +  
Sbjct: 132 CPKDCHYCPNQPGIARSYLLKEPGVLRGFRNGWDPISQFYDRASALENNGHVVDKIELII 191

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN------------------------VEITIEA 112
            GGT S    +     +           +                        + IT+E 
Sbjct: 192 LGGTFSFYPQRYSEEFMTASFYAANTYYDSAPLRPMRSLAEELTLNENARCRIIGITVET 251

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +  +  + +R  GV R+ LG+Q L++  L  + R+   ++ + AI    +   ++ 
Sbjct: 252 RPDYISAHELRRFRSLGVTRVQLGIQHLDDDILNIINRDCPTAKTVVAIQRLLDAGFKVD 311

Query: 173 FDLIYALPKQTMT---QWEMELQRA--LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +  LP  +     +    L  A   S+ VD   +Y       T   + ++ G     
Sbjct: 312 AHWMPDLPGSSFEKDMELFETLFSAENESFQVDQWKVYPTATVPFTKISEWYEQGQYKPY 371

Query: 228 SE-NVAVDLYNLTQSITSAHGLH 249
           +E +    +  L   I +     
Sbjct: 372 AELDNGAYMVKLLVYIMANCPYR 394


>gi|83309217|ref|YP_419481.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
 gi|82944058|dbj|BAE48922.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
          Length = 486

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 19/231 (8%)

Query: 25  WPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF        C  +C YC           G +   +S    ++ +R++        IFF
Sbjct: 207 VPFTTMITSRGCPARCNYC-----TAPTFYGNKTRARSTAKIIEELREI-RDLGYREIFF 260

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              T S  + +N+ +    +++N   +             ++       ++AG + +  G
Sbjct: 261 RDETFSAYKGRNMQVYETMLSENLDFTWIAN----GRVDMIDREQLALMKRAGCHTLKFG 316

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           V++  +  L    +     +A+ A   AR +       +I+  P +T+      +    +
Sbjct: 317 VETGSQMMLDTYKKGTTIEQAVEAFRTAREVGINTHAHIIFGGPGETLDTIRHTVDFVSN 376

Query: 197 -YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  +   LT   GT  + M  +    +   + +      T+S  S+ 
Sbjct: 377 TLKATTATFGILTPYPGTELFDMVAERHPEIMDGSASNMENLHTESFYSSA 427


>gi|309389817|gb|ADO77697.1| conserved hypothetical protein [Halanaerobium praevalens DSM 2228]
          Length = 318

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 21/224 (9%)

Query: 32  CPYC-----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C +C     DF   +    +  E   +  L   +++ +  G     + +F   T + +  
Sbjct: 43  CFFCGEEGADF--EMLSDNISVE---EQLLENKEYIGERYGVDQFIA-YFQNYTNTYLP- 95

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-------ISLGVQS 139
             +A I    A    +     I     P S+        +    N           G+Q+
Sbjct: 96  --LAAIKAYTASAAQIEGVKAIYFSTRPDSISEKYMVELQNMLKNNYQELQLAFEFGLQT 153

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  ++L+ + R H  +E I A+  A+ +   +   LI  LP  T        +   +  V
Sbjct: 154 VNYKTLKQVNRQHGLAEFIDAVLTAKKLEIEVGTHLILNLPNDTKEDVIEGARILSALKV 213

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           DH+ L+ L I + ++F + +K G+L + S    ++   L     
Sbjct: 214 DHVKLHALYIRENSVFAEKYKKGELKICSLAEYIERVILFLEYL 257


>gi|299823065|ref|ZP_07054951.1| radical SAM protein [Listeria grayi DSM 20601]
 gi|299816594|gb|EFI83832.1| radical SAM protein [Listeria grayi DSM 20601]
          Length = 318

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S         +  +    T+   +R     +   + +             ++ + +
Sbjct: 53  CTFCSVAGSGDFAGDRALD-LKTQFAVVRDQMHQKWKKASYIAYFQAFTNTHAPVSELRE 111

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
              +       V ++I   P  +  +      +        I LG+QS  +++   + R 
Sbjct: 112 KYEQVMNEPGVVGLSIATRPDCLPDDVVDYLAELNERTYLWIELGLQSAHDETGILINRA 171

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+ +  +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 172 HDYACYLEGVQKLKARGIRVCTHIINGLPKETPEMMMETARKVVDSGVDGIKIHLLHLLK 231

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   K +++GDL   S+   V L      I     +  
Sbjct: 232 GTPMVKDYQNGDLTFLSKEAYVSLVADQLEILPPEMVIH 270


>gi|146185746|ref|XP_001032426.2| histone acetyltransferase, ELP3 family protein [Tetrahymena
           thermophila]
 gi|146143111|gb|EAR84763.2| histone acetyltransferase, ELP3 family protein [Tetrahymena
           thermophila SB210]
          Length = 582

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 77/214 (35%), Gaps = 21/214 (9%)

Query: 38  NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP-------QNIA 90
            + +R  +     +IQ+    ++ +++L            GGT   ++        +N+ 
Sbjct: 160 PTSMRAIRARYNPYIQT-RDRVEQLKKLGHDVDKVEFIIMGGTFMSLDASYRDYFIRNLH 218

Query: 91  LILDGIAKNW----------TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
             L G   +           + +  + ITIE  P      +       G  RI +GVQS+
Sbjct: 219 DALSGHRSHNVAEAIKFSDESRAKCIGITIETRPDFCYQPHLSDMLLYGCTRIEVGVQSI 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---Y 197
            E   R   R H          L+++   ++   L+  LP   + +     +       +
Sbjct: 279 YEDVARDTNRGHTIEAVKKCFRLSKDAGFKVVSHLMPDLPNMGIERDLESFKEFFENPDF 338

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             D L +Y   + +GT  Y++ K+G     + N 
Sbjct: 339 RTDGLKIYPTLVIRGTGLYELWKNGKYRNYNPNA 372


>gi|189425244|ref|YP_001952421.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421503|gb|ACD95901.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 473

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 87/252 (34%), Gaps = 24/252 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YCD +   R ++     +I      ++ +  L     I  +FF     +     
Sbjct: 211 CPYQCSYCDRSVFSRGFRFNSPEYI------LEHVAMLQRDYGIRHVFFYDDLFTF---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +         +   V     A    V+       + +G  +++ G++S + + L+ 
Sbjct: 261 DRKRVAHFCELKARMGLQVTYNCIARLEHVDQELLSLLKGSGCWQVNFGIESGDPEILKK 320

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             + +   E    + + ++   R+    +  LP +        +  ALS  +D +++ + 
Sbjct: 321 HRKFYGLDEVGRKLQMVKDSGMRVKGLFMVGLPGEDEAAIRRTIDYALSLPLDEINVTKF 380

Query: 208 TIEKGT-------LFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEIS--- 254
           T   G         F + ++  +L+     V +         + + +      Y  S   
Sbjct: 381 TPFPGAPVFKTLEQFGQFNEAWELMNCMNFVFIPHGMTKQQLEDLYNEFIRRFYRRSRIH 440

Query: 255 -NHSFLGAESLH 265
             ++ +  +S H
Sbjct: 441 WGYTKMIWQSPH 452


>gi|159041666|ref|YP_001540918.1| radical SAM domain-containing protein [Caldivirga maquilingensis
           IC-167]
 gi|157920501|gb|ABW01928.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
          Length = 470

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 18/222 (8%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CPY C F S           +    +       +        ++   G    +       
Sbjct: 206 CPYGCSFCST--------SYYWGRLIRY--RSAKNVADEIEDAVNKYGANTIVFTDDEFT 255

Query: 91  L----ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           L    + + + +      ++  +  +   +++        + G   +  GV+S  + ++ 
Sbjct: 256 LGKRFVYEFLRELEERKLDINFSCGSRVDTIDKKMMSELLRHGCTALYFGVESASQDTIN 315

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +G+     +AI        +        +   P +T+   +   + A+     +     
Sbjct: 316 RIGKKITIEQAIKVFEWVHELKVNAVASFVIGFPWETIDDMKNTAKFAVKLNPSYAQFTV 375

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            T   GT  Y    + +L    E+   + Y   ++I   +  
Sbjct: 376 ATPYPGTPLYYQAVNENL---IEDWNWEHYTTLRAIMRGYRF 414


>gi|260461993|ref|ZP_05810238.1| RNA modification enzyme, MiaB family [Mesorhizobium opportunistum
           WSM2075]
 gi|259032240|gb|EEW33506.1| RNA modification enzyme, MiaB family [Mesorhizobium opportunistum
           WSM2075]
          Length = 473

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 24/209 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----------FF 76
           C K C +C                +   + E + + +  G R ++ +             
Sbjct: 187 CDKFCTFC---VVPYTRGSEVSRPVAQIVAEAERLAE-AGVREVTLLGQNVNAWHGQGDT 242

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
            GG     E   +  +L  +A+   ++     T  ++P  ++      +R     +  + 
Sbjct: 243 KGGRT---EEWGLGRLLHRLAQIPGLARLRYTT--SHPRDMDDELIAAHRDLPSLMPYLH 297

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L VQS  ++ L+ + R H A + +A +   R   P ++   D I   P +T   +E  ++
Sbjct: 298 LPVQSGSDRILKAMNRRHTARDYLALLDRIRAARPDIALSGDFIVGFPGETEADFEATME 357

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                       ++ +   GT   +M   
Sbjct: 358 LVRQVNYASAFSFKYSPRPGTPGAEMADH 386


>gi|332795771|ref|YP_004457271.1| histone acetyltransferase, ELP3 family [Acidianus hospitalis W1]
 gi|332693506|gb|AEE92973.1| histone acetyltransferase, ELP3 family [Acidianus hospitalis W1]
          Length = 469

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 90/288 (31%), Gaps = 45/288 (15%)

Query: 25  WPF-CVK-KCPYCD----FN---SHVRRYKV---GQENFIQSFLTEMQWMRQLTG----P 68
            P+ C   KC +C     +N   S+  R        EN    +      + Q       P
Sbjct: 20  HPYRCPHGKCIFCPGGVEYNTPQSYYGREPTLMRAIENNFDPYCQVRSRLEQYFENGHFP 79

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE--------------------- 107
             +  I  GG   SL        + + I          E                     
Sbjct: 80  NKVELIIMGGTFLSLPLDYQDWFVTNAIEAMNNFPKKKEKDKFVYLEEAQLRNETAQIRC 139

Query: 108 --ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
             +TIE  P   +  +     + G  ++ LGVQ++ +  L+ + R H   ++I +  + +
Sbjct: 140 VGMTIETKPDWGKEWHANQMLRLGATKVELGVQTIYDDILKKVNRGHTVKDSIESTRILK 199

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           +   ++ + ++  LP     +    ++       +  D L +Y   + +     ++ K G
Sbjct: 200 DSGFKIVYHIMLGLPGADPDKDLETIKEIFTNSDFMPDMLKIYPTLVVETAPLAELWKRG 259

Query: 223 DLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL 267
                  +  V++ +                 +I  +  L      N+
Sbjct: 260 LYTPYDTDTLVEIISEAYRYIPKWVRIMRIQRDIPANIILAGNKKGNI 307


>gi|265762465|ref|ZP_06091033.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255073|gb|EEZ26419.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 311

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 48  CTYCN-NQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTY---AELEG 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +        +   K     +  G+++  + +L+ +
Sbjct: 104 LKRKYEEALSVDGVVGLVIGTRPDCMPDPLLRYLEELNKHTFLLVEYGIETTRDVTLKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +  ++            +I  LP +T  +   +  +     +  L ++QL 
Sbjct: 164 NRGHTYADTVETVNRTAACGILTGGHVILGLPGETHDEIIAQAAKLSRLPLTTLKMHQLQ 223

Query: 209 IEKGTLFYKMHKD 221
           + +GT   +  + 
Sbjct: 224 LIRGTKMAREFEC 236


>gi|73670614|ref|YP_306629.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
 gi|72397776|gb|AAZ72049.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
          Length = 459

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 91/252 (36%), Gaps = 24/252 (9%)

Query: 18  SLGVYVHWPF-------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPR 69
            L +Y + P        C   C +C          V +  +I       +  ++      
Sbjct: 186 PLHLY-NIPGTILTSRGCPSNCGFC------AGPVVMERKYIARSAKNVIAEVQMCIDKF 238

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKN---WTVSSNVEITIEANPSSVEVNNFQGYR 126
            I+S +F   T +  + Q +  I DG+ +     +++ N++ T E+   +V     Q  R
Sbjct: 239 RITSFYFVDDTMTH-DTQRLMDICDGLRQIKIPPSITRNLKWTCESRADAVTPEILQDMR 297

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG   I  G++S  +Q L  LG+     +   A+  +R         +++  P +T   
Sbjct: 298 SAGCTTIQFGMESGSQQLLDQLGKKITLKQIENAVIWSREAGISPVLSMVFPHPNETEKT 357

Query: 187 WEMELQRALSY---AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +              + +    LT+  GT F    +   + L + +     YNL   I 
Sbjct: 358 LQETFNFIRRLYEIGAEKIIPSLLTLFPGTRFMDQREKLGIKLLTNDTEE--YNLGTPIL 415

Query: 244 SAHGLHAYEISN 255
           +   L    I+N
Sbjct: 416 TTRYLDLNSIAN 427


>gi|291544052|emb|CBL17161.1| radical SAM protein, TIGR01212 family [Ruminococcus sp. 18P13]
          Length = 322

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 16/196 (8%)

Query: 32  CPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +CD    + +H     + ++  +++ L  ++  ++   PR I+  +F   T +    +
Sbjct: 51  CVFCDGGSGYFTHAAAMPIPEQ--LEAELARIR--KRDPDPRVIA--YFQVHTNTYAPVE 104

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQS 144
            +  + +    +  V     + I   P  +  +      +        + LG+Q+  + +
Sbjct: 105 RLRQVYEPALSHPAVMG---LAIGTRPDCLPTDVLAYLEELSHRTNLTVELGLQTCMDDT 161

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            R + R +  S    A+        R    LI  LP +T  Q     ++      D + L
Sbjct: 162 ARRINRGYPFSIFANAMEQLHQRRIRTCVHLINGLPGETPVQMVESARQVGLLHPDAVKL 221

Query: 205 YQLTIEKGTLFYKMHK 220
             L + +GT     + 
Sbjct: 222 QLLHVIRGTALADWYN 237


>gi|154150867|ref|YP_001404485.1| radical SAM domain-containing protein [Candidatus Methanoregula
           boonei 6A8]
 gi|153999419|gb|ABS55842.1| Radical SAM domain protein [Methanoregula boonei 6A8]
          Length = 369

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 60/194 (30%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT----PSL 83
           C   C YC           G     +S     ++  +    R +S   F  G+    P  
Sbjct: 145 CPFACGYC-----QTPQIFGHCMRHRSIDEIAKYANRYGQARFVSPNAFAYGSDGIHPRF 199

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEE 142
                I  +L  I K     +      E  P  V   +     +   N ++  G QS  +
Sbjct: 200 ---DKIERLLQKIKKEIFFGT---FPSEVRPEFVCEKSLALISEYCTNTKLHFGAQSGSD 253

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY-AVDH 201
             L+ L R H   +AIAA  L          D I   P +T    E  +        +  
Sbjct: 254 AVLKRLRRGHTVDDAIAAAELCAVAGITPVIDFIVGFPFETDEDQEATITVIKDLSRIGK 313

Query: 202 LSLYQLTIEKGTLF 215
           + +++     GT  
Sbjct: 314 IHVHRFIPLPGTDL 327


>gi|170288223|ref|YP_001738461.1| putative radical SAM protein [Thermotoga sp. RQ2]
 gi|170175726|gb|ACB08778.1| conserved hypothetical radical SAM protein [Thermotoga sp. RQ2]
          Length = 303

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 92/232 (39%), Gaps = 9/232 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YCD  +    +       I+  + EM+   +  G +   + +F   + +    + +  
Sbjct: 41  CIYCD--ATGSGFTTLMRLPIREQVMEMKKKYEKRGIKKFIA-YFQSFSNTYAPVEVLR- 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +   +     S V++++   P  V     + F+ ++K     + LG+Q+   ++L+ +
Sbjct: 97  --ERYEEALVDDSIVQLSVSTRPDLVSERVLDLFEEFKKRVDVSVELGLQTANYRTLKKI 154

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R+H  +E + A    +     +   +I  LP   M       +   +  VD + L+ L 
Sbjct: 155 NRDHTLAEFVDAAVRVKRRGIELVVHVILNLPWDDMEDVVETAKILSALDVDGVKLHSLY 214

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           + + T   +M+K G++ + S    +D         S + +    +++    G
Sbjct: 215 VVERTKLAEMYKKGEIKICSLEEYIDRAITFLEYLSPNVVIHRLVADPPRKG 266


>gi|282882431|ref|ZP_06291058.1| radical SAM protein, family [Peptoniphilus lacrimalis 315-B]
 gi|300813773|ref|ZP_07094083.1| radical SAM protein, TIGR01212 family [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|281297751|gb|EFA90220.1| radical SAM protein, family [Peptoniphilus lacrimalis 315-B]
 gi|300512116|gb|EFK39306.1| radical SAM protein, TIGR01212 family [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 299

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 80/200 (40%), Gaps = 18/200 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C             EN   S   ++   +++   +  +     +F   T + ++ ++
Sbjct: 41  CIFCG------EEGGSFENTDGSIKEQLSQAKEIMKRKYKAEKFISYFQNFTNTYMDIES 94

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRISLGVQSLEEQS 144
              I++       V   V ++I   P  +   + +      +   V  + +G+Q++   +
Sbjct: 95  FKKIINESL----VEDVVGVSISTRPDCLYKEHLEFLEQVNKDYMVT-LEIGLQTVNYHT 149

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R H  ++ I  +  A+    R+   ++  LP           +   + +VD + +
Sbjct: 150 LKIINRGHGLADFIDGVLRAKKHGLRVCVHVLIGLPWDDDLDVYECAKILSALSVDEVKI 209

Query: 205 YQLTIEKGTLFYKMHKDGDL 224
           + L I K TL  K+++DG +
Sbjct: 210 HALYIVKNTLMGKLYEDGKI 229


>gi|167535111|ref|XP_001749230.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772383|gb|EDQ86036.1| predicted protein [Monosiga brevicollis MX1]
          Length = 551

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 79/235 (33%), Gaps = 44/235 (18%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+     + ++ 
Sbjct: 87  CPHIAMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRHRV-EQLKS 145

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN--WTVSSNVE----------- 107
           L            GGT   ++ +     I  + D ++ +    V   VE           
Sbjct: 146 LGHSVDKVEFIVMGGTFMALDAEYRDYFIRNLHDALSGHTSNNVKEAVEYSERSRTKCIG 205

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     + G  R+ +GVQS+ E   R   R H       + H A++ 
Sbjct: 206 ITIETRPDYCLRPHLNSMLEYGCTRLEIGVQSVFEDVARDTNRGHTVKAVSESFHGAKDT 265

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
             ++   ++  LP   + +   +         +  D L LY   + +GT  Y++ 
Sbjct: 266 GFKVVAHMMPDLPNMGLERDVAQFVEFFENPAFRADGLKLYPTLVIRGTGLYELW 320


>gi|299144106|ref|ZP_07037186.1| radical SAM protein [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518591|gb|EFI42330.1| radical SAM protein [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 306

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRNHNASEAI 158
           +   V I+I   P  +         +   N    + LG+Q+   ++L+ + R H  +E I
Sbjct: 113 IDDIVGISISTRPDCISDKYLDFLEEINKNIFITLELGLQTANYRTLKKINRGHGLAEFI 172

Query: 159 AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             ++ A+    R+   +I  LP               +  VD + L+ L I + T+  K+
Sbjct: 173 DGVNRAKKRNIRVCTHVILNLPYDDEIDVIETAHILNALQVDEVKLHALYILENTMMGKL 232

Query: 219 HKDGDLVLPSENV 231
           +K+G + L S   
Sbjct: 233 YKEGKINLISLEE 245


>gi|70726621|ref|YP_253535.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           haemolyticus JCSC1435]
 gi|123734986|sp|Q4L5Z6|MIAB_STAHJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|68447345|dbj|BAE04929.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 514

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 80/233 (34%), Gaps = 18/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  +  G+E   +     ++ +R L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIEEVRGLARDGYKEITLLGQNVNSY--GK 274

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +I  +  G+       S ++I       ++P        +   K G  V  I L VQS  
Sbjct: 275 DIKDLEYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIAKGGNIVPHIHLPVQSGN 334

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ +GR +     +  ++  +   P ++   D+I   P +T  Q+E  L        
Sbjct: 335 NAVLKIMGRKYTRESYLDLVNRIKKSIPNVALTTDIIVGYPNETEEQFEETLSLYDEVQF 394

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +H   Y  +   GT   KM  +    +    +      +     S   ++ YE
Sbjct: 395 EHAYTYLYSQRDGTPAAKMKDNVPEDVKKARLQRLNKKVGH--YSEKAMNQYE 445


>gi|157869860|ref|XP_001683481.1| acetyltransferase-like protein [Leishmania major]
 gi|68126546|emb|CAJ04898.1| acetyltransferase-like protein [Leishmania major strain Friedlin]
          Length = 704

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 41/263 (15%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ F      + Q     S             +  
Sbjct: 214 CPKDCHYCPNQPGIARSYLLKEPGVLRGFRNGWDPISQFYDRASALENNGHVVDKIELII 273

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN------------------------VEITIEA 112
            GGT S    +     +           +                        + IT E 
Sbjct: 274 LGGTFSFYPQRYAEEFMTASFYAANTYYDSAPLRPMRSLAEELTLNEGARCRIIGITAET 333

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +     + +R  G+ R+ LG+Q L++  L  + R+   ++ + AI    +   ++ 
Sbjct: 334 RPDYISARELRRFRSLGITRVQLGIQHLDDDILNLINRDCPTAKTVVAIQRLLDAGFKVD 393

Query: 173 FDLIYALPKQTMT---QWEMELQRA--LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +  LP  +     +    L  A   S+ VD   +Y       T   + +  G     
Sbjct: 394 AHWMPDLPGSSFEKDMELFETLFSAENESFQVDQWKVYPTATVPFTKISEWYAQGQYKPY 453

Query: 228 SE-NVAVDLYNLTQSITSAHGLH 249
           +E +    +  L   I       
Sbjct: 454 AELDNGAYMVKLLVYIMEHCPYR 476


>gi|331086086|ref|ZP_08335169.1| hypothetical protein HMPREF0987_01472 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407009|gb|EGG86514.1| hypothetical protein HMPREF0987_01472 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 282

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 4/187 (2%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C FN         +E + +  L E+++   + G      +F  G  P  +  + +  IL 
Sbjct: 25  CSFNQCAFCSMYKEEAYEEVMLQEIEFEL-MNGETYTERVFLTGADPLSVGYEKMMRILK 83

Query: 95  GIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
            I K +     V +       ++  V   +    AG+  + +G +S  ++ L+ + + H 
Sbjct: 84  LIQKYYPYCGCVAMYAAVRTINNYTVEELKQLHAAGLRLLYIGFESGSDEVLKSIRKGHT 143

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLTIEK 211
              AIA            +  ++Y +  +  +    +   +    +    +    LT+  
Sbjct: 144 VKTAIAVGKKLNEARLPFNAIVMYGIAGEGNSEENAKKTAEMLNQFLASKIITMNLTVFA 203

Query: 212 GTLFYKM 218
            T   KM
Sbjct: 204 STELAKM 210


>gi|16329745|ref|NP_440473.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechocystis
           sp. PCC 6803]
 gi|2501538|sp|P73127|MIAB_SYNY3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|1652230|dbj|BAA17153.1| sll0996 [Synechocystis sp. PCC 6803]
          Length = 451

 Score = 73.4 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 16/225 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L   E+    +  +++  +V+  + C ++C YC          V Q    ++   EM+
Sbjct: 130 ESLHIMEDITKPRRESTVSAWVNIIYGCNERCSYC---VVPNVRGVEQSRTPEAIYGEME 186

Query: 61  WMRQLTGPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-N 113
            + Q  G + ++ +      +G   P +    +++  + D +     +     +     +
Sbjct: 187 VLAQQ-GFKEVTLLGQNIDAYGRDLPGTTPSGRHLHTLTDLLYHVHDIEGIDRLRFATSH 245

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P        Q  ++         +  QS +   L+ + R +   + +  I   R   P  
Sbjct: 246 PRYFTERLIQACQELPKVCEHFHIPFQSGDNDILKAMKRGYTREKYLQIIEKIRRYMPDA 305

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +S D+I   P +T  Q+E  L        D L+    +   GT 
Sbjct: 306 AISADVIVGFPGETEAQFENTLNLIEEVGFDLLNTAAYSPRPGTP 350


>gi|301057478|ref|ZP_07198574.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300448406|gb|EFK12075.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 562

 Score = 73.4 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 21/203 (10%)

Query: 24  HWPF---CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           H  F   C  +C +C       R               +++       + ++ ++  G  
Sbjct: 184 HVAFTRGCPAQCTFCGSPKFWGR--------------RVRFHSATYFVKQLTYLYERGIR 229

Query: 81  PSLIEPQNI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
                          ++D   +       +     +    V+    +  R AG  +IS G
Sbjct: 230 FFYFSDDTFLINKERVIDICREIIERDIKISWFAISRVDLVDEEVLRWMRLAGCTQISYG 289

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           V+S  E+   FL +N  + +   A  L            IY  P +TM   +  +     
Sbjct: 290 VESGSEEIRDFLNKNIRSDDIKKAFQLTTRYGILARAYFIYGSPGETMHTVKETIDLIRD 349

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
                   Y L I  GT+ Y M 
Sbjct: 350 IKPLGAIFYILDIFPGTILYDMF 372


>gi|325661588|ref|ZP_08150212.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472115|gb|EGC75329.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 314

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 79/233 (33%), Gaps = 24/233 (10%)

Query: 28  CVKK-----CPYC-----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +     C +C      F S   +  V Q+           ++ +        + +F 
Sbjct: 33  CPNRINGGGCTFCAEIGTGFESLSNQKTVTQQ-----LNENKAFISKKYKAEKFIA-YFQ 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----- 132
             T + +   +    +        +   +EI+I   P  +  +  +  ++          
Sbjct: 87  NYTNTFMPLSDFQNCMKEAGSQRDI---IEISISTRPDCIRKDYMEVLKQIKETYSVEIT 143

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++   +L  + R H  +E + A+   +     +   +I  LP  T        +
Sbjct: 144 LELGLQTVNYHTLDDIQRGHGLAEYLDAVRCIQMYDFTICTHVILNLPGDTRRDAIETAK 203

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +  + ++ L I K TL    +++G + + S+   +          S 
Sbjct: 204 ILSALRIPIVKIHSLYIAKNTLLCNAYENGTIAVCSKEEYLQRLADFLEYLSP 256


>gi|316931567|ref|YP_004106549.1| RNA modification enzyme, MiaB family [Rhodopseudomonas palustris
           DX-1]
 gi|315599281|gb|ADU41816.1| RNA modification enzyme, MiaB family [Rhodopseudomonas palustris
           DX-1]
          Length = 463

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 18/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + + + ++Q +    G R ++ I      + G  P+
Sbjct: 166 CDKFCTFC---VVPYTRGAEMSRPVAAIIADVQRLADH-GVREVTLIGQNVNAYHGDGPN 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   + +   +   V +     +P+ V+ +    +R     +  + L VQS
Sbjct: 222 ----GGAWSLGRLVRRLAEIPGIVRLRYSTSHPNDVDDDLLTAHRDLPALMPFVHLPVQS 277

Query: 140 LEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A +    I    A +     S D I   P +T   +   L      
Sbjct: 278 GSDRILAAMNRKHTADDYRRVIDRFRAASDAIAFSSDFIVGFPGETERDFSATLALVAQI 337

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  ++ +   GT   +M +     +  E +      + Q   + +
Sbjct: 338 GYAGAYSFKYSPRPGTPAAEMPEMVPAAVMDERLERLQQLIDQQQAAFN 386


>gi|94263586|ref|ZP_01287396.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93456006|gb|EAT06157.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 589

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 77/252 (30%), Gaps = 31/252 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R  V      Q      Q +    GPR +  +     +P    P 
Sbjct: 183 CPFACSYC---LSAARPGVKLLPPAQVKAELSQLLAH--GPRLVRFVDRTFNSP----PD 233

Query: 88  ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS--LGVQSLEE 142
               +   L           +     E  P                 R    +G+QS  +
Sbjct: 234 RALELWRWLAAQ------PGDTRFHFEIAPELFTTEQLDFLATVPAGRFQFEIGLQSFNQ 287

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R  +   A+A I   +      +  DLI  LP  T   +   L + L+    H
Sbjct: 288 EALAAVNRRPDLGRAVANIQRLQAAGNIHLHLDLILGLPFDTRASYHHSLNQILALRPHH 347

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           L L  L +   T      ++  L    +            + +   L   E++    LG 
Sbjct: 348 LQLGLLKVLPDTPLAARREEFGLRHCRQPP--------YQVLANRWLDQPELAALYRLGE 399

Query: 262 --ESLHNLNYWR 271
             E+ +N  ++R
Sbjct: 400 VIEAFYNPRFFR 411


>gi|88860583|ref|ZP_01135221.1| Fe-S protein [Pseudoalteromonas tunicata D2]
 gi|88817781|gb|EAR27598.1| Fe-S protein [Pseudoalteromonas tunicata D2]
          Length = 476

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 14/219 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  + +  G R +     ++    G    +  
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPLDDVILEIAQLAEQ-GVREVNLLGQNVNAYRGK---MHD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    D +    T+     I     +P     +  + Y      V+ + L VQS  ++
Sbjct: 213 GEICYFSDLLRYVATIDGIDRIRYTTSHPIEFTPDIIEAYADIPELVDHLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   + + P +S   D I   P +T   +E  +        D 
Sbjct: 273 ILALMKRGHTALEYKSTIRKLKKVRPNLSMSSDFIIGFPGETTADFEATMNLINDIGFDM 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +  +   GT    +  D       E + +    +TQ
Sbjct: 333 SFSFIYSARPGTPAADLPDDVSEQEKKERLYILQNRITQ 371


>gi|297624625|ref|YP_003706059.1| RNA modification enzyme, MiaB family [Truepera radiovictrix DSM
           17093]
 gi|297165805|gb|ADI15516.1| RNA modification enzyme, MiaB family [Truepera radiovictrix DSM
           17093]
          Length = 444

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 25/202 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--------FGGG 79
           C   C YC     V + +  +   +   L  +    +      +  I+        +G G
Sbjct: 152 CNHHCTYC----IVPQTRGPE---VSRSLESIMHEARAMQAAGVQEIYLLGQNVNSYGLG 204

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P L     +  ++            V+ T   +P +   +      +       I L V
Sbjct: 205 RPDLPSFAELLRLVAATGI-----PRVKFTTS-HPMNFTSDVIDAMAECDNVCKYIHLPV 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ LR + R +  +  +  I   +   P   +S D+I   P +T   +E  L    
Sbjct: 259 QSGSDRVLRRMAREYRRARYLEIIAEIKAKIPDVVISTDIIVGFPGETEEDFEATLTLYD 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYK 217
               DH  ++  +   GT  YK
Sbjct: 319 EVGFDHAYMFMYSARPGTPSYK 340


>gi|39997663|ref|NP_953614.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA]
 gi|39984555|gb|AAR35941.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA]
 gi|298506603|gb|ADI85326.1| MiaB-like tRNA-modifying enzyme [Geobacter sulfurreducens KN400]
          Length = 434

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 21/241 (8%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     V   R +     F         +  Q      ++ I  G     L  
Sbjct: 151 CDAFCSYC----IVPHARGRSRSVPFRDVLEGIGTFAYQGFREVVLTGIHLGAYGADLEP 206

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQ 143
           P ++  +L+       V      ++E  P  +         ++ V    + + +QS  + 
Sbjct: 207 PASLLDLLEAADAEALVPRLRVGSVE--PHEISDGLIALMARSPVICPHLHIPLQSGSDS 264

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A+     +       P +    D+I   P +T  ++   L       + H
Sbjct: 265 VLERMNRRYTAAFFRERVERLAAAVPDICIGCDVIAGFPGETDEEFAATLALLEGLPIAH 324

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           L ++  +  +GT   +M    D  +  E            +  A      E  +  F+G 
Sbjct: 325 LHVFPFSRREGTPAARMPGQVDGKIVRERA---------EVLRALSDRKRETFHRRFMGR 375

Query: 262 E 262
           +
Sbjct: 376 D 376


>gi|224538263|ref|ZP_03678802.1| hypothetical protein BACCELL_03154 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520123|gb|EEF89228.1| hypothetical protein BACCELL_03154 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 309

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 7/194 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 46  CTYCN-NQTFNPEYCRTEKSVTQQLEEGKVFFAHKYPEMKYLAYFQAYTNTY---GELEA 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           +     +  +VS  V + I   P  +         +   N    +  G++S  + +LR +
Sbjct: 102 LKRKYEEALSVSDVVGLVIGTRPDCMPDTLLHYLEEVNKNTFLLVEYGIESTHDATLRRI 161

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   + + A+             +I  LP +T      +        +  L ++QL 
Sbjct: 162 NRGHTFQDTVDAVERTVACGILTGGHIILGLPGETHEDLVAQAATLSRLPITTLKMHQLQ 221

Query: 209 IEKGTLFYKMHKDG 222
           + +GT     ++  
Sbjct: 222 LIRGTRMAHEYEQH 235


>gi|154271828|ref|XP_001536767.1| hypothetical protein HCAG_08549 [Ajellomyces capsulatus NAm1]
 gi|150409437|gb|EDN04887.1| hypothetical protein HCAG_08549 [Ajellomyces capsulatus NAm1]
          Length = 449

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 77/235 (32%), Gaps = 42/235 (17%)

Query: 28  CVKK------CPYC------DFNSHVRRYKVGQENFIQSFLTE----------MQWMRQL 65
           C         C YC      DF    + Y   +   +++              ++ ++ L
Sbjct: 121 CPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYDPFEQARGRVEQIKSL 180

Query: 66  TGPRSISSIFFGGGTPSLIE----PQNIALILDG--IAKNWTVSSNVE-----------I 108
                       GGT   +      + I+ + +     +   V   V+           I
Sbjct: 181 GHSVDKVEYIIMGGTFMSLPEDYRDEFISQLHNALSGYQTKNVDEAVQAGEMSNIKCVGI 240

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           TIE  P      +     + G  R+ +GVQSL E   R   R H          L+++  
Sbjct: 241 TIETRPDYCLDTHLSSMLRYGCTRLEIGVQSLYEDVARDTNRGHTVKAVAETFKLSKDAG 300

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHK 220
            ++   ++  LP   M +   + +       +  D L +Y   + +GT  Y++ +
Sbjct: 301 FKVISHMMPDLPNVGMERDLDQFREYFENPDFRTDGLKIYPTLVIRGTGLYELWR 355


>gi|330940664|gb|EGH43684.1| coproporphyrinogen III oxidase [Pseudomonas syringae pv. pisi
          str. 1704B]
          Length = 100

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 1  MKYLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
             L A   +   + S  L +YVH PFC   C YC  N  + + +   + ++Q    E+Q
Sbjct: 38 FDLLHALRES--RKASRPLSLYVHLPFCANICYYCACNKVITKDRGRAQAYLQRLEHEIQ 95

Query: 61 WMR 63
           + 
Sbjct: 96 MLA 98


>gi|147676584|ref|YP_001210799.1| biotin synthase and related enzymes [Pelotomaculum
           thermopropionicum SI]
 gi|146272681|dbj|BAF58430.1| biotin synthase and related enzymes [Pelotomaculum
           thermopropionicum SI]
          Length = 352

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C K C YC     N  ++RY++  E  +   +       +  G R++       G    
Sbjct: 62  YCRKNCYYCGIRRGNKKLKRYRMSIEEIVDCAV-----QAERLGYRTV---VLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  ++  I +   V+  + ++I   P       ++   +AG +R  +  ++   +
Sbjct: 114 YTADKLIDLIRRIKERCDVA--ITLSIGERPR----EEYERLYEAGADRFLIRFETSNPE 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R L  + +  E +  +   R I  ++   ++  LP QT+     ++ +     +D + 
Sbjct: 168 LYRKLHPDSDYYERMRILSWLREIGYQVGSGIMIGLPGQTVEDLADDILKFEELELDMVG 227

Query: 204 LYQLTIEKGTLFY 216
           +       GT   
Sbjct: 228 VGPYICHDGTPLA 240


>gi|156389247|ref|XP_001634903.1| predicted protein [Nematostella vectensis]
 gi|156221991|gb|EDO42840.1| predicted protein [Nematostella vectensis]
          Length = 527

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 88/251 (35%), Gaps = 22/251 (8%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH 162
           +  + ITIE  P      +       G  R+ +GVQS+ E   R   R H       + H
Sbjct: 197 TKCIGITIETRPDYCLKKHLSSMLAYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFH 256

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMH 219
            +++   ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ 
Sbjct: 257 QSKDAGFKVVSHMMPDLPNVGLERDIDQFIEFFENPAFRADGLKIYPTLVIRGTGLYELW 316

Query: 220 KDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH-------SFLGAESLHNLNYW 270
           K G       N  V   +L   I +        Y +          S +   +L  L   
Sbjct: 317 KTGRYKSYPPNTLV---DLIARILALVPPWTRVYRVQRDIPMPLVSSGVEHGNLRELALA 373

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESW-LKMVRKNGHAVVEKE-FLSSEQQAD 328
           R  D      G   R           I      + ++ +R++  A    E FLS E    
Sbjct: 374 RMKDL-----GTQCRDVRTREVGIQEIHHKVRPFEIEQIRRDYVANGGWETFLSYEDPEQ 428

Query: 329 EFLMMGLRLRE 339
           + L+  LRLR+
Sbjct: 429 DILIGLLRLRK 439


>gi|78043108|ref|YP_359752.1| radical SAM family protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995223|gb|ABB14122.1| radical SAM protein, TIGR01212 family [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 316

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 60/148 (40%), Gaps = 5/148 (3%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNASEA 157
           +  V +++   P +V     +   +    +     + LG+Q++  ++L  + R H  +E 
Sbjct: 109 TDIVGLSVSTRPDAVNDKYLEVLAEVKNKKNIEVDVELGLQTVNYKNLIAINRGHTLAEF 168

Query: 158 IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           I A+   +     ++  LI  LP +T+       +   +  +D + L+ L I + T+   
Sbjct: 169 IDAVLRIKKFGLNVTTHLILNLPGETLVDVIENAKIMSALKIDFVKLHTLFIPEKTVLGD 228

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSA 245
           M+++G + +      V          S 
Sbjct: 229 MYREGKIEIIPLEEYVQWVVTFLEYLSP 256


>gi|126465569|ref|YP_001040678.1| radical SAM domain-containing protein [Staphylothermus marinus F1]
 gi|126014392|gb|ABN69770.1| Radical SAM domain protein [Staphylothermus marinus F1]
          Length = 474

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 20/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+    +S       +  L      + I F           
Sbjct: 208 CPYGCIYC-----ITSYFWGRRIRFRSAKNVADEVEFLVNKYKANHIAF--------SDD 254

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++      + + I +      ++  +  +  + +     +     G   +  GV+S  ++
Sbjct: 255 DLVINKRFVREFIDEIKKRGLDITFSCGSRVNHINKEILKTLYDNGCTALYFGVESASQE 314

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  +G+     +A       + +        I   P +T+   +  +  A+    D++ 
Sbjct: 315 TLDRIGKRITLEQAERVFKWVKELKGFALGSFILGFPWETIDDMKKTVDFAIKLDPDYVQ 374

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              LT   GT  ++  K  +L    E+   + Y   + +         E+
Sbjct: 375 FTALTPYPGTPLFEYAKKHNL---IEDWNWEHYTTVKPVMRGFHFTRKEL 421


>gi|253576646|ref|ZP_04853974.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844060|gb|EES72080.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 317

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 83/228 (36%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF          +++ +  F T ++  + L  P +    +F   T +   
Sbjct: 55  CTFCSARGSGDF------AGSRRDDLVTQFAT-IRDRQHLKWPHAKYIGYFQAYTNTYAP 107

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +    + I +   V   V ++I   P  +  +      +        + +G+Q++ E
Sbjct: 108 VEVLREYYEAILEQPGV---VGLSIATRPDCLPDDVVDYLAELNERTYLWVEMGLQTIHE 164

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +   + R H+    + A+   R    R+   +IY LP++T        +   +  V  +
Sbjct: 165 STSTLINRAHDTQCYLDAVEKLRARGIRVCTHIIYGLPQETHEMMLETGRAVANMDVQGI 224

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + + T   K ++ G L    ++  V L   T        +  
Sbjct: 225 KIHLLHLMRKTPMVKQYEAGLLRFLEQDEYVKLIVDTLEFLPPEMIVH 272


>gi|254166689|ref|ZP_04873543.1| radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|289596366|ref|YP_003483062.1| Radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|197624299|gb|EDY36860.1| radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|289534153|gb|ADD08500.1| Radical SAM domain protein [Aciduliprofundum boonei T469]
          Length = 459

 Score = 73.0 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 87/247 (35%), Gaps = 12/247 (4%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           CP+ C F S   ++         S  + E++ +R+  G + I  +     T +L  P+ I
Sbjct: 199 CPFNCAFCSSSLQFGKRWRGHSDSRVIEELKILREEYGRKEIEFLD---DTFTLNRPRAI 255

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             I   I K      ++  T  +             +  G + +  G++S  +++L F+G
Sbjct: 256 -RISKMIRKEGL---DISWTASSRVDIFTNEVADALKYGGCHTVYFGIESGSQKTLDFIG 311

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           +     +++AA+  AR          I   P++T    +  ++ +    VD+      T 
Sbjct: 312 KRITPEQSLAAVKKARAHKLHALGAFIIGFPEETKEDIKKTIKFSKKVGVDYAQFTVATP 371

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
             GT  +      +L+L         Y     +         EI+        S +    
Sbjct: 372 YPGTRLWNYAMARNLILTFN---WRKYTTLDPVMKLMHFTTQEITKFLQWAYVSFYVRPI 428

Query: 270 WRYGDYI 276
           +   D I
Sbjct: 429 YLLKDLI 435


>gi|227499595|ref|ZP_03929702.1| conserved hypothetical radical SAM protein [Anaerococcus tetradius
           ATCC 35098]
 gi|227218354|gb|EEI83608.1| conserved hypothetical radical SAM protein [Anaerococcus tetradius
           ATCC 35098]
          Length = 323

 Score = 73.0 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 68/155 (43%), Gaps = 9/155 (5%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNR-ISLG 136
           + +  +    ++    K++ V+    I+I      +  +     ++     G++    LG
Sbjct: 93  TYMSLKEFKEVIRACNKDYIVA----ISISTRSDCLSRDKLDFLKEFRQKTGIDITFELG 148

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   ++L  L R  + ++ IAA  L +    R+   +I +LP   +       +   +
Sbjct: 149 LQTANYKTLDVLNRGESLADFIAACILLKEYKIRICTHVILSLPWDNLRDVIETARIITA 208

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V+ + ++ L + K T   KM+++G++ + S+  
Sbjct: 209 LGVNEIKIHSLFVVKNTKLSKMYENGEVSMISKEE 243


>gi|222099479|ref|YP_002534047.1| hypothetical protein CTN_0505 [Thermotoga neapolitana DSM 4359]
 gi|221571869|gb|ACM22681.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 376

 Score = 73.0 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 81/244 (33%), Gaps = 18/244 (7%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC   S   +    ++     ++ +  + + + + +   P S 
Sbjct: 110 GIYMPIEITRGCPFSCAYCQTPSLAGKQVRHRDVDVIIHYAKLGVEKNRKLARFIAPNSF 169

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGV 130
                 G TP++   + I  +L G+ K             E  P SV     +  +K   
Sbjct: 170 GYGSRNGVTPNV---EKIEELLYGLKKVGVEEIYFGTFPSEVRPESVTDEVLKVVKKYVK 226

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR I +G QS  ++ L+ + R H   +   AI            D I+  P +T    EM
Sbjct: 227 NRSIVIGAQSGSDRVLKIIKRGHTVEQVEEAIEKIAFHGFTPHVDFIFGFPFETKEDIEM 286

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                +      +  Y   I   T F  +            +  D Y     + S   L 
Sbjct: 287 TFNFIMRI----VERYGAKIHAHT-FMPLPGTELFRAGPGRLTKDHYRFLGRLASKGILD 341

Query: 250 AYEI 253
            Y +
Sbjct: 342 GYWL 345


>gi|222446056|ref|ZP_03608571.1| hypothetical protein METSMIALI_01705 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349405|ref|ZP_05974822.1| magnesium-protoporphyrin IX monomethyl ester cyclase
           [Methanobrevibacter smithii DSM 2374]
 gi|222435621|gb|EEE42786.1| hypothetical protein METSMIALI_01705 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861768|gb|EFC94066.1| magnesium-protoporphyrin IX monomethyl ester cyclase
           [Methanobrevibacter smithii DSM 2374]
          Length = 474

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 85/220 (38%), Gaps = 14/220 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   S     K  +E  +++ + E+++++       I +I F   T +L    
Sbjct: 203 CPMQCSFCS--SAAMHGKKIRERSVENIVDEIEYLKT---NYDIDTIAFMDDTFTL---- 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++    +    +  +     +   +++    +  ++AG   I +GV+S ++Q L  
Sbjct: 254 KKRKVMAICDEILKRNIEIMWGCTSRVDTLDEKLLKKMKEAGCITIFIGVESADQQQLDN 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N   ++   A  +A  +  R    +   +P  T       ++       +  ++Y L
Sbjct: 314 MCKNTTIAKIENAFKIAHKLKIRTIASVALGMPGDTKEIMNKTVKFVHKLKPN-YAIYSL 372

Query: 208 -TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            T   GT FYK   + +L+   +      Y L   I    
Sbjct: 373 ATPYPGTRFYKEAFEKNLIKIKD---WSKYTLITPILETI 409


>gi|167756743|ref|ZP_02428870.1| hypothetical protein CLORAM_02290 [Clostridium ramosum DSM 1402]
 gi|237734462|ref|ZP_04564943.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167702918|gb|EDS17497.1| hypothetical protein CLORAM_02290 [Clostridium ramosum DSM 1402]
 gi|229382282|gb|EEO32373.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 314

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 79/216 (36%), Gaps = 17/216 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  ++    +    ++ ++   + +  + Q   P      +F   
Sbjct: 39  CPNRDGTKGTGGCIFCS-STGSGDFAGNIQDSLEIQFSNVSLLLQNKWPNCKYIAYFQAN 97

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +      +  I   I       + V I+I   P  +E +      +   NR    + L
Sbjct: 98  TNTYGP---LKKIKACIEPFINKKNVVAISIATRPDCLETDVLNYLAEVN-NRCDLWVEL 153

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++ +Q+   + R HN  + +  ++  R +   +   +I  LP +T        +   
Sbjct: 154 GLQTIHDQTGELINRGHNYQDFLDGLNKLRKLKINVCVHIINGLPGETYEMMLETAKAVG 213

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              +  L ++ L + + T  ++++      + S + 
Sbjct: 214 QLDIQALKIHMLYVIEKTKLHQLYLQQPFKILSRDE 249


>gi|304317098|ref|YP_003852243.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778600|gb|ADL69159.1| Radical SAM domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 559

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 23/228 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC  +S   R +      +++ L  +  M          S              
Sbjct: 180 CPFRCSYC-LSSLDNRLRYATIEKVKADLRTLSKMGAKIVKLIDRSF-----------DS 227

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
           NI   ++ +     +  +     E NP  +        +    +RI    G+Q+  + +L
Sbjct: 228 NIKRAIEILNIIRELKGDTVFHCEVNPELINKEFIDSLKGIE-DRIQFEVGIQTTNKSTL 286

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + RN +   A+  I L  +   ++  DLI  LP  +                D + L 
Sbjct: 287 IKVSRNPDVESALNGIKLIVDAGIKVHVDLIAGLPGDSFKSVANSFNDVYKLNPDEIQLG 346

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            L + KGT   K      +            +    +     +  YE+
Sbjct: 347 FLKLLKGTDLRKNADKYFI--------EFRCDAPYEVLKTSTMSYYEL 386


>gi|46200709|ref|ZP_00056585.2| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 465

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 61/193 (31%), Gaps = 3/193 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +++   K  + + +   +  +  +    G R  + I  G      I  Q
Sbjct: 190 CPFACTFCS--AYLITGKKVRHHSMDYMVEWIDHLYHQYGIRQFAFIDDGLTVFPDIPKQ 247

Query: 88  NIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
               I+D   K                   ++    +  ++AG   +++  +S   + L+
Sbjct: 248 FCRTIIDLRRKGHWAEPIYFTSPNGTRMEKLDDELLRLMKEAGWQGLTIAPESGSRRVLK 307

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + ++ +       +   +     +    I+  P +T    +  +        D  ++ +
Sbjct: 308 QIKKSLDPDIVPDVVRRIKAAGLGVRGFFIFGFPGETREDIDETIGLIRRCDFDTFNIGR 367

Query: 207 LTIEKGTLFYKMH 219
                GT  +   
Sbjct: 368 FLPIPGTPIFNQM 380


>gi|299535293|ref|ZP_07048616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
           fusiformis ZC1]
 gi|298729275|gb|EFI69827.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
           fusiformis ZC1]
          Length = 517

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +  +R+L        +  G    +  +  
Sbjct: 226 CDKFCTYC-----IVPYTRGKERS-RRPEEIIAEVRELAAAGYKEIMLLGQNVNAYGKDF 279

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D + +   +         ++P   + +  +   K G  V  I L VQS    
Sbjct: 280 EDIDYRLGDLMDELRKIDIPRIRFTTSHPRDFDDHLIEVLAKRGNLVEHIHLPVQSGSND 339

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   +   P ++   D+I   P +T  Q+E  L        D 
Sbjct: 340 VLKIMARKYTREHFLGLVDRIKAAIPEVTLTTDIIVGYPNETEEQFEETLSLYREVGFDA 399

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
              Y  +  +GT   KM  +
Sbjct: 400 AFTYIYSPREGTPAAKMIDN 419


>gi|148642445|ref|YP_001272958.1| anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
           elongator protein [Methanobrevibacter smithii ATCC
           35061]
 gi|148551462|gb|ABQ86590.1| anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase,
           Elongator protein 3/MiaB/NifB family [Methanobrevibacter
           smithii ATCC 35061]
          Length = 474

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 85/220 (38%), Gaps = 14/220 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   S     K  +E  +++ + E+++++       I +I F   T +L    
Sbjct: 203 CPMQCSFCS--SAAMHGKKIRERSVENIVDEIEYLKT---NYDIDTIAFMDDTFTL---- 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++    +    +  +     +   +++    +  ++AG   I +GV+S ++Q L  
Sbjct: 254 KKRKVMAICDEILKRNIEIMWGCTSRVDTLDEKLLKKMKEAGCITIFIGVESADQQQLDN 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N   ++   A  +A  +  R    +   +P  T       ++       +  ++Y L
Sbjct: 314 MCKNTTIAKIENAFKIAHKLKIRTIASVALGMPGDTKEIMNKTVKFVHKLKPN-YAIYSL 372

Query: 208 -TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            T   GT FYK   + +L+   +      Y L   I    
Sbjct: 373 ATPYPGTRFYKEAFEKNLIKIKD---WSKYTLITPILETI 409


>gi|197120130|ref|YP_002140557.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197089490|gb|ACH40761.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
           TIGR01212 family [Geobacter bemidjiensis Bem]
          Length = 321

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 19/216 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFG 77
           C  +        C +C        Y + QE  +   L   +   +R+    R I+  +F 
Sbjct: 30  CPNRDGKVGTQGCIFCG-GKGSGSYGILQEAGVAQQLEHAKEVMVRKYKAARFIA--YFQ 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---IS 134
             + +    + +  + D       V   V + +   P  +                  + 
Sbjct: 87  SYSNTYAPVERLKALYDEALSVPDV---VGLIVGTRPDCLPEATLDLLASYARRTYFWLE 143

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+QS  +++L  +GR H+ +   +A+   R    R+   +I  LP ++  +     +  
Sbjct: 144 LGLQSHLDRTLAAIGRGHDRASFESALKGCRERGIRVCAHVILGLPGESREEMLSCAEYL 203

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
               VD + ++ L + +GT   + ++ G++ +   +
Sbjct: 204 NRQGVDGVKVHLLHVMRGTRLAEQYEGGEVTILDRD 239


>gi|124485405|ref|YP_001030021.1| hypothetical protein Mlab_0580 [Methanocorpusculum labreanum Z]
 gi|124362946|gb|ABN06754.1| MiaB-like tRNA modifying enzyme [Methanocorpusculum labreanum Z]
          Length = 416

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 87/244 (35%), Gaps = 28/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC   + + R K+     E+ ++   + ++         +  +  +G      +
Sbjct: 135 CNGHCTYC--ITRLARGKLVSFSAEDIVRQAKSIVEAGATEIQLTAQDTSSWG------L 186

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEV---NNFQGYRKAG-VNRISLGVQS 139
           +  +   + D + +   +  N  I I  ANP ++     +     +       + + VQS
Sbjct: 187 DRNDGLRLPDLLRQLCAIPGNFMIRIGMANPDTLLPILDDFLDALKDPKIFLFLHIPVQS 246

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSY 197
             +  LR +GR + +++       AR  FP  R+S D I     +T        ++    
Sbjct: 247 GSDSVLRLMGRRYTSAQYEEICQRARKAFPEIRISTDYIAGFSGETDEDAAKSAEQIRRT 306

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               +++ + ++   T   KM K  + +    +             +      Y+ +N +
Sbjct: 307 RPGKVNITRFSVRPNTPAAKMKKIPEPIKKQRSRE----------LTDAANEVYDANNEA 356

Query: 258 FLGA 261
            +G 
Sbjct: 357 LIGH 360


>gi|118579048|ref|YP_900298.1| putative radical SAM protein [Pelobacter propionicus DSM 2379]
 gi|118501758|gb|ABK98240.1| conserved hypothetical radical SAM protein [Pelobacter propionicus
           DSM 2379]
          Length = 331

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 25/231 (10%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---------IFFGGGTPS 82
           C +C           GQ +     L ++  + QL   + +            +F   + +
Sbjct: 70  CIFCG----------GQGSGSHGILRDLGIVAQLEDGKEVMRRKYRASKFLAYFQAYSNT 119

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQS 139
               + + L+         V   V + +   P  +  +      K        + LG+QS
Sbjct: 120 YAPVERLGLLFGQALLTPDV---VGMIVATRPDCLPPDVLDYLWKLSQQTYFWLELGLQS 176

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + + SL ++ R H+ +  + A+   R+   R+   +I  LP ++               +
Sbjct: 177 IHDTSLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAGELNRLGL 236

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             + L+ L + KGT   +MH  G++ L   +  V L      +     L  
Sbjct: 237 AGVKLHLLHVMKGTRLAEMHARGEVPLMDRDEYVGLVCDFLELLDPAILIH 287


>gi|330686356|gb|EGG97959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           epidermidis VCU121]
          Length = 514

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 79/234 (33%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYQEITLLGQNVNSY--GK 274

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +I  +  G+       S ++I       ++P        +     G  V  I L VQS  
Sbjct: 275 DIEGLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGN 334

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L        
Sbjct: 335 NAVLKIMGRKYTRESYLDLVSRIKEAIPNIALTTDIIVGYPNETEEQFEDTLTLYDEVGF 394

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +H   Y  +   GT   KM  +    +  E +      + +   S   +  YE 
Sbjct: 395 EHAYTYLYSQRDGTPAAKMKDNVPTDVKKERLQRLNKKVGE--YSQKAMSQYEN 446


>gi|206901875|ref|YP_002250468.1| Fe-S oxidoreductase family protein [Dictyoglomus thermophilum
           H-6-12]
 gi|206740978|gb|ACI20036.1| Fe-S oxidoreductase family protein [Dictyoglomus thermophilum
           H-6-12]
          Length = 400

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 68/203 (33%), Gaps = 16/203 (7%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMR-----QLTGPRSISSIFFGGGTPS--L 83
           CPY C F    R +     +  +S    +  ++      L   R ++   F  G+ +   
Sbjct: 157 CPYGCYFCQTPRIFGGVMRH--RSVEKILDLVKVMNNLNLKDIRFVTPNAFAYGSNTGKD 214

Query: 84  IEPQNIALILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVN-RISLGVQS 139
           +    I  +L GI K       +       E  P  V+    +  +    N  + +G QS
Sbjct: 215 VNLVKIEELLSGIRKVIGKKGRIFFGSFPSEVRPEHVKEETLELVKTYANNDNLVIGAQS 274

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++ L    R H   +   A+ L      + + D I+ LP +     E  ++       
Sbjct: 275 GSQRILDLSHRAHTVEDVYKAVELTLKYNLKANVDFIFGLPYEEEKDIEETVRFIEELVK 334

Query: 200 DHLSLYQLTIE--KGTLFYKMHK 220
               ++  T     GT F K   
Sbjct: 335 MGAKVHAHTFMPLPGTPFAKFPP 357


>gi|224026565|ref|ZP_03644931.1| hypothetical protein BACCOPRO_03322 [Bacteroides coprophilus DSM
           18228]
 gi|224019801|gb|EEF77799.1| hypothetical protein BACCOPRO_03322 [Bacteroides coprophilus DSM
           18228]
          Length = 315

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 11/196 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          +  +   L E +       P+     +F   T +      + L
Sbjct: 45  CTYCN-NQTFNPAYCRDDRSVTMQLEEGKRFFARKYPQMKYLAYFQAYTNTY---GELEL 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           +     +   V   V + I   P  +  +      +  VNR     +  G++S ++++L 
Sbjct: 101 LKRMYEEALAVEGVVGLVIGTRPDCMPDSLLDYLEE--VNRRTFLLVEYGIESADDRTLE 158

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H+ +    A+        R    +I  LP ++      + +R     +  L ++Q
Sbjct: 159 RINRGHSFACTEDAVRRTAARGIRTGGHVILGLPGESREDLIKQAERLSELPLTTLKMHQ 218

Query: 207 LTIEKGTLFYKMHKDG 222
           L + +GT     +   
Sbjct: 219 LQLIRGTRMAHEYALH 234


>gi|281357356|ref|ZP_06243845.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
 gi|281316387|gb|EFB00412.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
          Length = 570

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 16/226 (7%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C  +       C +C  +    R+     +        +++ R   G       +F   T
Sbjct: 30  CPNREGGFGAGCAFCAEDGSRARHLSRHLDLTGQVAAGVEFARNRYGAEPPYIAYFQAFT 89

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGV 137
            +    + +  +               + I   P ++         +        I LGV
Sbjct: 90  STFAPAEKLRRLYREALAAADFK---VVIIGTRPDALPEPVLDLLSELAREYELWIELGV 146

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  +++L  + R H+ +  + A +         +  +I  LP ++   +    +R  + 
Sbjct: 147 QSSHDRTLELIRRGHDFAATVKAANQLAERGINAACHVIAGLPGESAEDFFRTAERIAAL 206

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               + L+QL   K T           V P      +         
Sbjct: 207 PFRAVKLHQLLTLKKTPLAS---PEFPVKPQPLNEYEYMEQAAEFL 249


>gi|313608423|gb|EFR84365.1| radical SAM protein, family [Listeria monocytogenes FSL F2-208]
          Length = 321

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S         +  +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGDRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|227827892|ref|YP_002829672.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.14.25]
 gi|238620118|ref|YP_002914944.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.4]
 gi|227459688|gb|ACP38374.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.14.25]
 gi|238381188|gb|ACR42276.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.4]
 gi|323474979|gb|ADX85585.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           REY15A]
 gi|323477710|gb|ADX82948.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           HVE10/4]
          Length = 473

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 102/288 (35%), Gaps = 21/288 (7%)

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PS  +P  + L    +         V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 115 FPSYDKPSFVYLEDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALS 196
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK    +       +    +
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPKSDPDKDLEAFKTIFSDPN 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEI 253
           +  D L +Y   + +      + + G          ++L +                 +I
Sbjct: 235 FRPDMLKIYPTLVVETAPLANLWRRGLYKPYGTETLIELISEMYRYIPKWVRVMRIQRDI 294

Query: 254 SNHSFLGAESLHNLNYWRYGDYI--GIGPGAHSRVKVGSHRVAISIEKH-----PESWLK 306
             +  L      NL        +  GI      ++     R    + +H       + + 
Sbjct: 295 PANVILDGNKKGNLRELVEKKVLEKGI------KINEIRFREVGMMWQHRGLLPDHTKIH 348

Query: 307 MVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           + ++   A    E FLS E +  E L+  LRLR   +    + + G+ 
Sbjct: 349 LYKEVYEASEGTEIFLSFEDEK-EILIGYLRLRIPSNKAHRKEIDGKT 395


>gi|283852006|ref|ZP_06369281.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
 gi|283572556|gb|EFC20541.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
          Length = 490

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 76/240 (31%), Gaps = 27/240 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  +      +  +   ++  L E+ W              F G      E  
Sbjct: 220 CPYRCSFC-LHPQTLTGRAARCRSVEKVLDEVSWCLD----------NFPGLRTIFFEDD 268

Query: 88  NI--ALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +    +         +   +     AN    ++        +AG  ++ +G +S + ++
Sbjct: 269 TLTADRVRCREFCAAILRRGLRFEWSANSRADLDAGLLAVMHRAGCRQVCVGFESADPKA 328

Query: 145 LRFL--GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  +  G   +  E   A   A+    ++    I+  P  T       +  AL    D  
Sbjct: 329 LASMKKGLAASRMEKFRA--DAKAAGIKVHGCFIFGFPGDTRESILATIDFALKLNPDTA 386

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
             Y + +  GT  Y  +        + +V    Y   +   +  GLH   I N S   AE
Sbjct: 387 QFYPVMVYPGTEAYAEYNA------AGHVTAASY---RDWLTPSGLHNCVIRNESLSAAE 437


>gi|150020941|ref|YP_001306295.1| radical SAM domain-containing protein [Thermosipho melanesiensis
           BI429]
 gi|149793462|gb|ABR30910.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
          Length = 398

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 82/249 (32%), Gaps = 28/249 (11%)

Query: 26  PFCVKK-----------CPY-CDFNSHVR--------RYKVGQENFIQSFLTEMQWMRQL 65
           PFC +K           CP+ C +    R        R       + +  + + + + + 
Sbjct: 139 PFCPEKNLFMPIEITRGCPFSCGYCQTPRLAGKLIRHRPVEQIVEYTKIGVQKGRKIARF 198

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
             P S       G  P++   +N+   L G+              +  P SV     +  
Sbjct: 199 ISPNSFGYGSKNGVIPNVEVVENLLYSLKGVGVEEIYFGT--FPSDVRPESVNREILRVI 256

Query: 126 RKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           +K   NR I +G QS  E+ L+ + R HN  E   A+ L          D I+  P +T 
Sbjct: 257 KKYVNNRYIVIGAQSGSERVLKKINRGHNLEEIERALSLLVEFGFIPRVDFIFGFPFETD 316

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              E   +         ++ Y+  +   T F  +       +    +    Y     +T+
Sbjct: 317 EDIENTFEFIKKI----VNKYKAKVHAHT-FMPLPGTPLANVGPGKLTKKHYKFLGLLTA 371

Query: 245 AHGLHAYEI 253
              L  Y +
Sbjct: 372 QGYLDGYWL 380


>gi|239636980|ref|ZP_04677974.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus warneri
           L37603]
 gi|239597330|gb|EEQ79833.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus warneri
           L37603]
          Length = 514

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 79/234 (33%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYQEITLLGQNVNSY--GK 274

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +I  +  G+       S ++I       ++P        +     G  V  I L VQS  
Sbjct: 275 DIEGLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGN 334

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L        
Sbjct: 335 NAVLKIMGRKYTRESYLDLVSRIKEAIPNIALTTDIIVGYPNETEEQFEDTLTLYDEVGF 394

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +H   Y  +   GT   KM  +    +  E +      + +   S   +  YE 
Sbjct: 395 EHAYTYLYSQRDGTPAAKMKDNVPTEVKKERLQRLNKKVGE--YSQKAMSQYEN 446


>gi|197117553|ref|YP_002137980.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197086913|gb|ACH38184.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 506

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C++KC +C     +   +  +    ++F+ E++ +R   G   +         P+  + +
Sbjct: 205 CMEKCSFCS--QQLFWERSWRARSAENFVAELELLRDSYG---VEVAMLSDEIPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +    YR+AGV  I +GV++ ++ +L
Sbjct: 259 RWVRILDLMIERKV---GVKLLMETRVDDILRDADIMDKYREAGVEHIYVGVEAGDQATL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +N    ++ AAI +  N         +  +P  T       ++ A  Y  D     
Sbjct: 316 DLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIAATIELAKHYNPDMAFFL 375

Query: 206 QLTIEKGTLFY---------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y         K ++  +LV P            +          Y    H
Sbjct: 376 AIAPWPYAELYPELEPYVATKDYRKYNLVEPVIKPKAMTVEELERELGRASQKFY---MH 432

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
            F   + LH+L+ W+    + +
Sbjct: 433 KF---QKLHDLSPWKQTFMVAV 451


>gi|145298103|ref|YP_001140944.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|229890493|sp|A4SJX4|MIAB_AERS4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|142850875|gb|ABO89196.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 477

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 74/217 (34%), Gaps = 18/217 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP--SL 83
           C  YC F              +   L E+  + +  G R ++ +      + G T   S+
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPMDDVLYEIAQLAEQ-GVREVNLLGQNVNAYRGPTFDGSI 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I     +         ++P     +  + Y+     V+ + L VQS  
Sbjct: 216 CSFAELLRLVAAIDGIDRIRYTT-----SHPIEFTDDIIEVYKDTPEVVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P ++   D I   P +T   +E  ++       
Sbjct: 271 DRILTMMKRPHTVLEYKSKIRRLRAARPDITISSDFIVGFPNETDEDFEATMKLIEEINF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           D    +  +   GT    M  D D+ +    +A   +
Sbjct: 331 DMSFSFIYSPRPGTPAADMPDDVDMEVKKVRLARLQH 367


>gi|325662280|ref|ZP_08150895.1| hypothetical protein HMPREF0490_01633 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471532|gb|EGC74753.1| hypothetical protein HMPREF0490_01633 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 282

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 4/187 (2%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C FN         +E + +  L E+++   + G      +F  G  P  +  + +  IL 
Sbjct: 25  CSFNQCAFCSMYKEETYEEVTLQEIEFEL-MNGETYTERVFLTGADPLSVGYEKMMRILK 83

Query: 95  GIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHN 153
            I K +     V +       ++  V   +    AG+  + +G +S  ++ L+ + + H 
Sbjct: 84  LIQKYYPYCGCVAMYAAVRTINNYTVEELKQLHAAGLRLLYIGFESGSDEVLKSIRKGHT 143

Query: 154 ASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLTIEK 211
              AIA            +  ++Y +  +  +    +   +    ++   +    LT+  
Sbjct: 144 VKTAIAVGKKLNEARLPFNAIVMYGIAGEGNSEENAKKTAEMLNQFSASKIITMNLTVFA 203

Query: 212 GTLFYKM 218
            T   KM
Sbjct: 204 STELAKM 210


>gi|301161986|emb|CBW21530.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 311

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 48  CTYCN-NQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTY---AELEG 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +        +   K     +  G+++  + +L+ +
Sbjct: 104 LKGKYEEALSVDGVVGLVIGTRPDCMPDPLLRYLEELNKHTFLLVEYGIETTRDVTLKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +  ++            +I  LP +T  +   +        +  L ++QL 
Sbjct: 164 NRGHTYADTVETVNRTAACGILTGGHVILGLPGETHDEIIAQAAELSRLPLTTLKMHQLQ 223

Query: 209 IEKGTLFYKMHKD 221
           + +GT   +  + 
Sbjct: 224 LIRGTKMAREFEC 236


>gi|60680452|ref|YP_210596.1| hypothetical protein BF0903 [Bacteroides fragilis NCTC 9343]
 gi|60491886|emb|CAH06645.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 311

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 48  CTYCN-NQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTY---AELEG 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +        +   K     +  G+++  + +L+ +
Sbjct: 104 LKGKYEEALSVDGVVGLVIGTRPDCMPDPLLRYLEELNKHTFLLVEYGIETTRDVTLKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +  ++            +I  LP +T  +   +        +  L ++QL 
Sbjct: 164 NRGHTYADTVETVNRTAACGILTGGHVILGLPGETHDEIIAQAAELSRLPLTTLKMHQLQ 223

Query: 209 IEKGTLFYKMHKD 221
           + +GT   +  + 
Sbjct: 224 LIRGTKMAREFEC 236


>gi|317151807|ref|YP_004119855.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942058|gb|ADU61109.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 492

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 76/209 (36%), Gaps = 8/209 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C  N+   R  +     + S + E+ ++    G R+I  +         +   
Sbjct: 227 CPFKCSFCCINALFGRNTIRYRG-VDSVIDEIDYLVNTYGIRNIKIMDE-------MFAM 278

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +     +      ++     A  ++V        ++AG+N +S G +S  ++ +  
Sbjct: 279 NEKRVAALCDRIIERGYDLNFWAYARVNTVSPGMLAKMKRAGINWVSYGFESGSKRVIND 338

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + + ++ S+ +  +    +    +  + I+ LP+         LQ       +  ++Y  
Sbjct: 339 VTKGYDTSKVMEVVRQTYDEGLHICANYIFGLPEDDFESMNETLQMMFEINAEWANIYAA 398

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
               G+  Y +  +    LP    A   Y
Sbjct: 399 MALPGSQLYTLALENRWPLPESWQAYSQY 427


>gi|189501144|ref|YP_001960614.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
           phaeobacteroides BS1]
 gi|229890477|sp|B3ENP4|MIAB_CHLPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|189496585|gb|ACE05133.1| RNA modification enzyme, MiaB family [Chlorobium phaeobacteroides
           BS1]
          Length = 447

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 16/215 (7%)

Query: 11  MTGQGSNSLGVYVHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +    S ++  +   P    C  +C +C     V  +  G+E   + F + ++ + +L  
Sbjct: 148 IEPARSGTISAF--IPVMRGCNNRCAFC-----VVPFTRGKERS-RPFRSVLEDVGRLAA 199

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY- 125
                    G    S  + +      + + +    +  V I     +P  +  +  +   
Sbjct: 200 SGYKEITLLGQNVNSYSDDEAACDFTELLDRVAVAAEGVRIRFTTSHPKDISESLVRVIA 259

Query: 126 -RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQ 182
            R    N I L VQS   + L+ + R H   E    I + R+  P   +S DLI     +
Sbjct: 260 ARNNICNAIHLPVQSGSTRMLKLMNRGHTREEYFEKIAMIRSAIPGVTVSTDLIAGFCGE 319

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           T+   +  L        D   ++  ++  GT   K
Sbjct: 320 TLEDHQATLSMMEDVRFDFAYMFYYSVRPGTYAAK 354


>gi|198282884|ref|YP_002219205.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665819|ref|YP_002425085.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|229890414|sp|B7J5B2|MIAB_ACIF2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890415|sp|B5ENG4|MIAB_ACIF5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|198247405|gb|ACH82998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218518032|gb|ACK78618.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 451

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C +C               + +S    ++ +R L   G R I+    ++    G  
Sbjct: 157 CDKFCTFC------VVPHTRGREYSRSMPDILREVRALVEQGVREITLLGQNVNAYRGAT 210

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQS 139
            L+    +A +L+ +A+   +      T  ++P++++      +   G+    + L VQS
Sbjct: 211 GLVGEGGLADLLERLARIPGLLRLRYTT--SHPANLDDELIAAHGSIGILAPHLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R H   + +  +    A     ++S D I   P +T   +   ++   + 
Sbjct: 269 GSDRILRRMHRKHTVGQYLDKVDRLRAARPGIQISSDFIVGFPGETDADFAATMELIDAV 328

Query: 198 AVDHLSLYQLTIEKGTL 214
             D    ++ +    T 
Sbjct: 329 RFDQSFSFKYSQRPNTP 345


>gi|251795314|ref|YP_003010045.1| hypothetical protein Pjdr2_1282 [Paenibacillus sp. JDR-2]
 gi|247542940|gb|ACS99958.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
          Length = 321

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 81/228 (35%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF          +++ +  F  +++  +    P +    +F   T +   
Sbjct: 59  CTFCSARGSGDF------AGSRRDDLVTQF-NKIRDRQHQKWPEANYIGYFQAYTNTYAP 111

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +    + I +   V   V ++I   P  +  +      +        + +G+Q++ E
Sbjct: 112 VEELREYYEVILQQPGV---VGLSIATRPDCLPDDVVDYLAELNERTYLWVEMGLQTIHE 168

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +   + R H+ +  + A+   R    R+   +IY LP+++        +      V  +
Sbjct: 169 STSELINRAHDTACYLDAVRRLRERGIRVCTHVIYGLPQESHAMMLETGRAVAEMDVQGI 228

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L + + T   K ++ G L     +  V L   T        +  
Sbjct: 229 KIHLLHLMRKTPMVKQYEAGLLRFLELDEYVKLIVDTLEFLPPEMIIH 276


>gi|240104185|ref|YP_002960494.1| RNA modification enzyme, MiaB family (MiaB) [Thermococcus
           gammatolerans EJ3]
 gi|239911739|gb|ACS34630.1| RNA modification enzyme, MiaB family (MiaB) [Thermococcus
           gammatolerans EJ3]
          Length = 424

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 92/243 (37%), Gaps = 28/243 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFGGGTPSLIE 85
           C+  C YC      R  +   +++    +  ++W+R+    G R I       G      
Sbjct: 148 CLNACTYCA----TRFARGVLKSYKPELV--IKWVREAVSRGYREIILSSEDTGCYGFDI 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGVQSL 140
             N+A +LD I     +  +  + +   NP+          + Y+   +   + L VQS 
Sbjct: 202 GTNLAELLDEITA---IEGDFRVRVGMMNPNHVLKFLDELIEAYQDEKIYKFLHLPVQSG 258

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + + LR +GR +   E    ++  R   P   ++ D+I   P ++   +   ++      
Sbjct: 259 DNEILRRMGRTYTVEEFEEIVNAFRKKIPDLNLNTDIIVGFPGESDEAFRNTVELVKRVK 318

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D +++ + +   GT+  +        LP   V      L +   +      YEI N ++
Sbjct: 319 PDKINVSRYSARPGTIAARW-----KQLPGWLVKERSRELHRLRLAIA----YEI-NRAY 368

Query: 259 LGA 261
           +G 
Sbjct: 369 VGR 371


>gi|269213807|ref|ZP_06158190.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           cinerea ATCC 14685]
 gi|269145414|gb|EEZ71832.1| oxygen-independent coproporphyrinogen III oxidase [Neisseria
           cinerea ATCC 14685]
          Length = 171

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 46/134 (34%), Gaps = 16/134 (11%)

Query: 267 LNYWRYG-----DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFL 321
            N+  Y      D + IG  +  ++     +     E+  +++   + +    ++    L
Sbjct: 22  RNFQGYSTYADCDLVAIGVSSIGKIGNTYSQN----ERDIDAYYAAIDEGRLPIMRGYQL 77

Query: 322 SSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC------ERNLQRQGFIERVQFSR 375
           + +      ++  L  R  +  + +E ++G   D            L   G I       
Sbjct: 78  NQDDILRRNIIQDLMCRFALDYRVYEDISGTPFDRYFKDELADLEKLADLGLISLNDRG- 136

Query: 376 LRCTQRGMTMLDSV 389
           L  T +G  ++ ++
Sbjct: 137 LTVTPKGRFLIRNI 150


>gi|139438003|ref|ZP_01771556.1| Hypothetical protein COLAER_00543 [Collinsella aerofaciens ATCC
           25986]
 gi|133776200|gb|EBA40020.1| Hypothetical protein COLAER_00543 [Collinsella aerofaciens ATCC
           25986]
          Length = 635

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P +V        R+ G  +I +G+QSL +  L    R  + ++   A  LAR
Sbjct: 304 VGLVIETRPDAVTPQALTLIRRLGCTKIQMGIQSLNQHLLDINERRVSVAQIERAFSLAR 363

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++    +  L   T    + + +  +   ++  D + +Y   + +G+     ++ G
Sbjct: 364 LFGFKIHAHFMLNLLGATPEGDKRDYECFMTESAFMPDEVKVYPCALIEGSRLVGCYERG 423

Query: 223 DLVLPSENVAVD 234
           +    +E   +D
Sbjct: 424 EWRPYTEEELLD 435


>gi|282162760|ref|YP_003355145.1| hypothetical protein MCP_0090 [Methanocella paludicola SANAE]
 gi|282155074|dbj|BAI60162.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 370

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 18/192 (9%)

Query: 32  CPYCDFNSHVRR--YKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFGGGTPSLIEPQ 87
           C YC       R      +   +++     ++   ++L  P + +     G TP   +  
Sbjct: 153 CAYC----QTPRLFGHHMRHRSVEAICKYDKFYEDKRLVSPNAFAYGS-DGITP---DEA 204

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLR 146
            +  +L  ++ N    +      E  P  V     +       NR I LG QS  ++ L+
Sbjct: 205 AVENLLKSLSGNIYFGT---FPSEVRPEFVTPRMLELVNAYCANREIHLGGQSGSDRMLK 261

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH--LSL 204
            + R H A++ + A+ L  +       D I+ LP +     ++ +    +   +   +  
Sbjct: 262 AIHRGHTAAQVLDAVELTHDNGLTPVVDFIFGLPGEREEDQQLTVDCINAIIKEGGKVRA 321

Query: 205 YQLTIEKGTLFY 216
           +      GT   
Sbjct: 322 HYFMPLPGTELA 333


>gi|290893254|ref|ZP_06556241.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290557236|gb|EFD90763.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 321

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S         +  +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGDRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|197119829|ref|YP_002140256.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197089189|gb|ACH40460.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 506

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C++KC +C     +   +  +    ++F+ E++ +R   G   +         P+  + +
Sbjct: 205 CMEKCSFCS--QQLFWERSWRARSAENFVAELELLRDSYG---VEVAMLSDEIPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +    YR+AGV  I +GV++ ++ +L
Sbjct: 259 RWVRILDLMIERKV---GVKLLMETRVDDILRDADIMDKYREAGVEHIYVGVEAGDQATL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +N    ++ AAI +  N         +  +P  T       ++ A  Y  D     
Sbjct: 316 DLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIAATIELAKHYNPDMAFFL 375

Query: 206 QLTIEKGTLFY---------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y         K ++  +LV P            +          Y    H
Sbjct: 376 AIAPWPYAELYPELEPYVATKDYRKYNLVEPVIKPKAMTVEELERELGRASQKFY---MH 432

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
            F   + LH+L+ W+    + +
Sbjct: 433 KF---QKLHDLSPWKQTFMVAV 451


>gi|114326782|ref|YP_743939.1| tRNA 2-methylthioadenosine synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|122328233|sp|Q0BVY6|MIAB_GRABC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|114314956|gb|ABI61016.1| tRNA 2-methylthioadenosine synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 493

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 16/215 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                  S L E + M +  G R I+    ++    G   L
Sbjct: 199 CDKFCSFC---VVPYTRGAEVSRPASSVLAEARRMVR-GGAREITLLGQNVNAYHG---L 251

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            E   +  +   I     +   + I     +P  V  +    +R     +  + L VQS 
Sbjct: 252 GEDGEVWTLARLIRALADIPDLLRIRYTTSHPRDVSDDLIAAHRDIPQLMPFLHLPVQSG 311

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A +    +   R   P   +S D I   P +T   +E  ++      
Sbjct: 312 SDRILAAMNRRHTAEDYFRVVDRLREARPDLALSSDFIVGHPGETDEDFEDTMRLIERVG 371

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                 ++ +   GT   +        +  E +  
Sbjct: 372 FAQAYSFKYSPRPGTPAAERDNHVPEPVMDERLQR 406


>gi|295101447|emb|CBK98992.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
           prausnitzii L2-6]
          Length = 441

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 18/221 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC       R  +                 +      +  +      P+     
Sbjct: 154 CNNRCHYCAIP--GIRGPLRSREMADCVAE-----ARWLAGEGVKELIIVAQDPTAYGED 206

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 I  +LD + K   +       + A P  +  +     ++    +  + L +Q  
Sbjct: 207 WGKPGSICELLDKLNKIPGLEWIR--IMYAYPERITDDFIAAMKRNEKVLPYLDLPIQHC 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R  N +E +  I   R   P ++    LI   P +T  Q+E          
Sbjct: 265 NDTILKNMNRRSNRAELLDVIGKLRREIPNITLRTTLIAGFPGETEEQFEDLCNFVKEVQ 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            D L  +  + E+ T+  +M    D  +  +   + +   T
Sbjct: 325 FDRLGCFAYSAEENTVAARMDGQIDQEVKDKRAELVMQIQT 365


>gi|160915151|ref|ZP_02077364.1| hypothetical protein EUBDOL_01159 [Eubacterium dolichum DSM 3991]
 gi|158432950|gb|EDP11239.1| hypothetical protein EUBDOL_01159 [Eubacterium dolichum DSM 3991]
          Length = 315

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 72/212 (33%), Gaps = 33/212 (15%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQ---------WMRQLTGPRS 70
           C  +        C +C          +G   +  +   ++           +++    +S
Sbjct: 42  CPNRDGTCGVGGCSFCG--------ALGSGEYAGNIHDDLAIQFTKGQEMMLKKWPNGKS 93

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRK 127
           I+  +F   + +      +    D  A    +     I+I      ++       Q   K
Sbjct: 94  IA--YFQAYSNTYAPCDVLKATFDPFAARKDI---CAISIATRADCLDEEKITYLQSLTK 148

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
                I LG+QS+ + + + + R H   + + AI L ++   ++   LI +LP ++    
Sbjct: 149 EKEIWIELGLQSIHDSTAKRINRGHTYQQFLDAIALLKDTDLKICVHLINSLPNESEKMM 208

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
                      +  + ++ L I + T   + +
Sbjct: 209 LETASAVGLLPIHAVKIHMLHIMENTKLAEEY 240


>gi|253316429|ref|ZP_04839642.1| hypothetical protein SauraC_09846 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
          Length = 514

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 79/232 (34%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + +    + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDREYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|56751740|ref|YP_172441.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           elongatus PCC 6301]
 gi|81301183|ref|YP_401391.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           elongatus PCC 7942]
 gi|81561774|sp|Q5N199|MIAB_SYNP6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123755327|sp|Q31KL5|MIAB_SYNE7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56686699|dbj|BAD79921.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81170064|gb|ABB58404.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus elongatus
           PCC 7942]
          Length = 452

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 78/224 (34%), Gaps = 15/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC   +   R +  +   I++ + ++       G R I+ +      +G   P 
Sbjct: 156 CNERCTYCVVPNVRGREQSREPAAIRAEIEQLAAQ----GYREITLLGQNIDAYGRDLPG 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S  E +++  + D +     V     I     +P        +   +         +  Q
Sbjct: 212 STPEGRHLHTLTDLLYTIHDVPGIERIRFATSHPRYFTERLIRACAELPKVCEYFHIPFQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +     +  +   R+I P   +S D I A P +T  Q+E  L+    
Sbjct: 272 SGDNDVLKAMARGYTVERYLRIVEQIRDIIPDAAISADAIVAFPGETEEQFENTLKLVEQ 331

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              D ++    +   GT            +  + +    + + Q
Sbjct: 332 VGFDLVNTAAYSPRPGTPAANAPNQLSEEVKQDRLQRLNHLVAQ 375


>gi|70606824|ref|YP_255694.1| hypothetical protein Saci_1044 [Sulfolobus acidocaldarius DSM 639]
 gi|68567472|gb|AAY80401.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 456

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 56/140 (40%), Gaps = 10/140 (7%)

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L+E   +      I         V +T+E  P   +  + +   + GV ++ LGVQ++ +
Sbjct: 116 LLEDAQLRNETASIRC-------VGLTVETKPDWSKEVHAKQMLRLGVTKVELGVQTVFD 168

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAV 199
             L    R H   ++I A  + ++   ++ + ++  LP     +     +R      ++ 
Sbjct: 169 DLLTKSNRGHTVKDSIEATKILKDNGFKVVYHMMLGLPGSDPDKDLESFERIFSDPDFSP 228

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D L +Y   + +     ++ 
Sbjct: 229 DMLKIYPTLVVETAPLAELW 248


>gi|229585159|ref|YP_002843661.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.27]
 gi|228020209|gb|ACP55616.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           M.16.27]
          Length = 473

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 102/288 (35%), Gaps = 21/288 (7%)

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PS  +P  + L    +         V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 115 FPSYDKPSFVYLEDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALS 196
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK    +       +    +
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPKSDPDKDLEAFKTIFSDPN 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEI 253
           +  D L +Y   + +      + + G          ++L +                 +I
Sbjct: 235 FRPDMLKIYPTLVVETAPLANLWRRGLYKPYGTETLIELISEMYRYIPKWVRVMRIQRDI 294

Query: 254 SNHSFLGAESLHNLNYWRYGDYI--GIGPGAHSRVKVGSHRVAISIEKH-----PESWLK 306
             +  L      NL        +  GI      ++     R    + +H       + + 
Sbjct: 295 PANVILDGNKKGNLRELVEKKVLEKGI------KINEIRFREVGMMWQHRGLLPDHTKIH 348

Query: 307 MVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRN 353
           + ++   A    E FLS E +  E L+  LRLR   +    + + G+ 
Sbjct: 349 LYKELYEASEGTEIFLSFEDEK-EILIGYLRLRIPSNKAHRKEIDGKT 395


>gi|253702439|ref|YP_003023628.1| hypothetical protein GM21_3853 [Geobacter sp. M21]
 gi|251777289|gb|ACT19870.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 311

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 80/231 (34%), Gaps = 24/231 (10%)

Query: 28  CVKK--------CPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C  +        C +C      S+     VG    ++     M  +R+    R I+  +F
Sbjct: 30  CPNRDGKVGTEGCIFCGGKGSGSYGILQGVGVAQQLEHAKEVM--VRKYKAARFIA--YF 85

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              + +    + +  + D       V   V + +   P  +                  +
Sbjct: 86  QSYSNTYAPVERLKALYDEALSVPDV---VGLIVGTRPDCLPEATLDLLASYARRTYFWL 142

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+QS  +++L  +GR H+ +   +A+   R    R+   +I  LP ++  +       
Sbjct: 143 ELGLQSHLDRTLSAIGRGHDRACFESALKGCRERGIRVCAHVILGLPGESREEMLSCADY 202

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                VD + ++ L + +GT   + +  G++ L   +  V    L      
Sbjct: 203 LNRQGVDGVKVHLLHVMRGTRLAEQYDAGEVTLLDRDSYVG---LACDFLE 250


>gi|170759054|ref|YP_001788894.1| radical SAM family protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406043|gb|ACA54454.1| radical SAM protein, TIGR01212 family [Clostridium botulinum A3
           str. Loch Maree]
          Length = 310

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 82/229 (35%), Gaps = 21/229 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C YC      DF         G  NF I     +++ + +          +F   T +  
Sbjct: 48  CIYCSERGSGDF--------AGDRNFKIHKQFQDIKKIMKEKWSSDKYIAYFQAYTNTYA 99

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAGVNRISLGVQSLE 141
               + ++ +   +  +    V + I   P  ++ +     +   K     + LG+Q++ 
Sbjct: 100 S---VNILREKYEEAMSEEGVVALAIATRPDCLDQDVLNLIEELSKKKYIWVELGLQTVN 156

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +++ + + R +  +    A+   R     +    I+ LP +T       ++      +  
Sbjct: 157 DETAKIINRGYKLNVFEKAVKDLRERNIDIVVHSIFGLPGETKEDMIGTVKYISKLDIQG 216

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  + L + + T   K+++ G+L     +  V+L     ++   + +  
Sbjct: 217 VKFHLLHLLEDTPLVKLYECGNLEFLDMDEYVELICEAITLLPPNMVVH 265


>gi|313159743|gb|EFR59100.1| radical SAM domain protein [Alistipes sp. HGB5]
          Length = 500

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 10/216 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC +     R     +  I +     + + +      I+ +FF     ++    
Sbjct: 247 CPYECIYCSYPHIDGRCVRTMDPEIIA-----ENILRAKRDYGINYLFFTDSVFNIRPEY 301

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N+ L    I +   V+     +    P  ++    + +R +G+  I  G +S  +++L  
Sbjct: 302 NVRLAETLIRRGTNVAWGAYFS----PRGIDAEQMRLFRASGLTHIEFGTESFCDRTLEA 357

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ- 206
            G+     + + A  LA +     +  LI      T       ++ +       +  Y  
Sbjct: 358 YGKRFTFGDVVRASRLALDNGVYYAHFLILGGYGDTREHVRETIENSRRLEYTVMFPYAG 417

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           + I   T   ++     ++ P +++    Y +    
Sbjct: 418 MRIYPHTRLAELAAREGVIGPDDDLLAPAYYIAPDF 453


>gi|261408930|ref|YP_003245171.1| hypothetical protein GYMC10_5153 [Paenibacillus sp. Y412MC10]
 gi|329922241|ref|ZP_08277943.1| radical SAM protein, TIGR01212 family [Paenibacillus sp. HGF5]
 gi|261285393|gb|ACX67364.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10]
 gi|328942278|gb|EGG38548.1| radical SAM protein, TIGR01212 family [Paenibacillus sp. HGF5]
          Length = 317

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 77/225 (34%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C      R             +T+   ++  +    P +    +F   T +    + 
Sbjct: 55  CTFCS----ARGSGDFAGRRRDDLVTQFNTIRDRQHQKWPNAKYIGYFQAYTNTYAPVEE 110

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + I +   V   V ++I   P  +  +  +   +        + +G+Q++ + + 
Sbjct: 111 LREYYEVILQQPGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVEMGLQTIHDSTS 167

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    + A+   R    R+   +IY LP++         +      V  + ++
Sbjct: 168 ELINRAHDTECYLEAVEKLRKHNIRVCTHIIYGLPQEDHDMMLATGRAVSKMDVQGIKIH 227

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + + T   K ++ G L    ++  + L   +        +  
Sbjct: 228 LLHLMRKTPMVKQYEAGLLRFLEQDEYISLIVDSLEFLPPEMIVH 272


>gi|189468036|ref|ZP_03016821.1| hypothetical protein BACINT_04430 [Bacteroides intestinalis DSM
           17393]
 gi|189436300|gb|EDV05285.1| hypothetical protein BACINT_04430 [Bacteroides intestinalis DSM
           17393]
          Length = 309

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 7/206 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 46  CTYCN-NQTFNPEYCRTEKSVTQQLEEGKIFFAHKYPEMKYLAYFQAYTNTY---GELEA 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  TV   V + I   P  +        +  +K     +  G++S  + +LR +
Sbjct: 102 LKRKYEEALTVPDVVGLVIGTRPDCMSDALLHYLEEVKKHTFLLVEYGIESTNDATLRRI 161

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   + + A+             +I  LP +       +        +  L ++QL 
Sbjct: 162 NRGHTYQDTVDAVERTAGCGILTGGHVILGLPGERHEDLVAQASTLSRIPLTTLKMHQLQ 221

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVD 234
           + +GT     ++         +V   
Sbjct: 222 LIRGTRMAHEYEQHPEDFHLFDVEEY 247


>gi|61657427|emb|CAI44342.1| hypothetical protein [Thermotoga sp. RQ7]
          Length = 404

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 81/244 (33%), Gaps = 18/244 (7%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC   S   +    ++     ++ +  + + + + +   P S 
Sbjct: 138 GIYMPIEITRGCPFSCAYCQTPSLAGKQVRHRDVDVIIHYAKLGVEKNRKLARFIAPNSF 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGV 130
                 G TP++   + I  +L G+ K             E  P SV     +  +K   
Sbjct: 198 GYGSRNGVTPNV---EKIEELLYGLKKVGVEEIYFGTFPSEVRPESVTDEVLKVVKKYVK 254

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR I +G QS  ++ L+ + R H   +   AI            D I+  P +T    EM
Sbjct: 255 NRSIVIGAQSGSDRVLKIIKRGHTVEQVEEAIEKIAFHGFTPHVDFIFGFPFETKEDIEM 314

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                +      +  Y   I   T F  +            +  D Y     + S   L 
Sbjct: 315 TFNFIMRI----VERYGAKIHAHT-FMPLPGTELFRAGPGRLTKDHYRFLGRLASKGILD 369

Query: 250 AYEI 253
            Y +
Sbjct: 370 GYWL 373


>gi|281492942|ref|YP_003354922.1| radical SAM superfamily protein [Lactococcus lactis subsp. lactis
           KF147]
 gi|281376594|gb|ADA66080.1| Radical SAM superfamily protein [Lactococcus lactis subsp. lactis
           KF147]
          Length = 313

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 20/235 (8%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +      F  E+    +         ++F   T +    + +  
Sbjct: 43  CTFCTVSGSGDMILEPEAPIADQFAAEVAQFHKKWPGVKKYIVYFQNFTNTHAPVEVLKE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
             +       V   V I+I   P  +  +      +   NR     I LG+Q+  E++  
Sbjct: 103 RFEQAVNQPDV---VGISIGTRPDCLPDDVVDYLAEL--NRRMEVWIDLGLQTTYEETSD 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLY 205
            + R H+    + A+   R     +   LI  LP +T       ++R  L   +  + L+
Sbjct: 158 LINRAHDYETYVDAVKRLRVHNINVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLH 217

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L + K T   + + +G L L S+          + I     +   EI  H   G
Sbjct: 218 LLHLMKQTRLQRDYHEGKLQLMSQE------EYVKVICDQLEMIPKEIVIHRLTG 266


>gi|253701133|ref|YP_003022322.1| radical SAM protein [Geobacter sp. M21]
 gi|251775983|gb|ACT18564.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 424

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 72/228 (31%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC           G    +    T ++ +          + +F   T +   P 
Sbjct: 199 CPMKCSYCS-----TPALEGTAIRMHPVETVLEALASHVAA-GFQNFYFVDNTFNF-PPD 251

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D I         +       P  V+        +AG   +SLG +S     L+ 
Sbjct: 252 YAKRLCDAIFSANL---GIRWRCILYPGFVDEEMVTKMARAGCVEVSLGFESGSPLILKS 308

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ- 206
           L + ++  +   A  L R         L++  P +T    +  L  A S  +D L L   
Sbjct: 309 LNKKYDLDQVREASELLRRHGIARMGFLMFGAPGETRETVQESLDFADSLQLDMLKLSTG 368

Query: 207 LTIEKGTLFY-------KMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           + I   T          ++  D DL+LP    A  L      + +   
Sbjct: 369 IRIYPDTPLAETAKREGRIAGDDDLLLPRFYQAEGLEEWLGPLLADWM 416


>gi|317472786|ref|ZP_07932097.1| TIGR01212 family radical SAM protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899705|gb|EFV21708.1| TIGR01212 family radical SAM protein [Anaerostipes sp. 3_2_56FAA]
          Length = 241

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 66/165 (40%), Gaps = 8/165 (4%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T + +    +    + + +       V I++   P  +  +  +   +    R  
Sbjct: 9   YFQNYTNTFLP---LGEFRNYVLEALEEEDIVGISLSTRPDCIRKDYLEFLNEIQQERGA 65

Query: 133 ---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              I  G+Q++   +L+ + R H  +E + A+ L       +   +I  LP  T+     
Sbjct: 66  AVTIEFGLQTVNYHTLKKMNRGHTLAEYLNAVLLTAPFGFEICTHVILNLPGDTVEDAVE 125

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             +   +  V  +  + L I K ++ Y+ ++DG + L ++   ++
Sbjct: 126 TARVISALPVSVVKAHSLYIPKNSVLYEEYRDGKISLCTKEEYIN 170


>gi|71066321|ref|YP_265048.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Psychrobacter
           arcticus 273-4]
 gi|123775573|sp|Q4FQU4|MIAB_PSYA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71039306|gb|AAZ19614.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychrobacter arcticus
           273-4]
          Length = 496

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 72/227 (31%), Gaps = 16/227 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  +    G R I+ +      + G      +
Sbjct: 204 CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAAQ-GVREINLLGQNVNGYRGEK----D 258

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             NI    + +     V     I     +P     +    Y +    V+ + L VQS   
Sbjct: 259 DGNICRFAELLHYVSHVDGVERIRYTTSHPLEFTDDIIDAYAQLPELVSHLHLPVQSGSN 318

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + RNH     I  I+  + I P +  S D I   P +T   ++  L  A     D
Sbjct: 319 TILAAMKRNHTIDVYINQINKLKAIRPDIHLSSDFIIGFPGETDQDFQDTLTLAKELNFD 378

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           H   +  +   GT   ++  D       E +A     +  S  +   
Sbjct: 379 HSYSFIYSKRPGTPAAELPDDVSFKTKKERLAEFQKVIIDSTLAKTH 425


>gi|253702123|ref|YP_003023312.1| radical SAM protein [Geobacter sp. M21]
 gi|251776973|gb|ACT19554.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 506

 Score = 72.3 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C++KC +C     +   +  +    ++F+ E++ +R   G   +         P+  + +
Sbjct: 205 CMEKCSFCS--QQLFWERSWRARSAENFVAELELLRDSYG---VEVAMLSDEIPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       +++ +E     +  + +    YR+AGV  I +GV++ ++ +L
Sbjct: 259 RWVRILDLMIERKV---GIKLLMETRVDDILRDADIMDKYREAGVEHIYVGVEAGDQATL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +N    ++ AAI +  N         +  +P  T       ++ A  Y  D     
Sbjct: 316 DLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIAATIELAKHYNPDMAFFL 375

Query: 206 QLTIEKGTLFY---------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y         K ++  +LV P            +          Y    H
Sbjct: 376 AIAPWPYAELYPELEPYVATKDYRKYNLVEPVIKPKAMTVEELERELGRASQKFY---MH 432

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
            F   + LH+L+ W+    + +
Sbjct: 433 KF---QKLHDLSPWKQTFMVAV 451


>gi|212711975|ref|ZP_03320103.1| hypothetical protein PROVALCAL_03051 [Providencia alcalifaciens DSM
           30120]
 gi|212685497|gb|EEB45025.1| hypothetical protein PROVALCAL_03051 [Providencia alcalifaciens DSM
           30120]
          Length = 300

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 15/233 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+ +S     +  Q   +Q      +  R      +    +F   T +      +  
Sbjct: 45  CTFCNVSSFSDENQSEQSISLQIQQQISRISRA-----NRYLAYFQAYTSTY---DEVHR 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V         GYR+ G      LG+Q+  +++L  
Sbjct: 97  LKLLYEEALQQADMVGLCVGTRPDCVPDAVLSLLAGYRQQGYEIWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R H+ +   A    AR +  ++   LI  LP +  T     L   L+   D + L+ L
Sbjct: 157 INRGHDFAAYQATAQKARALGLKVCTHLICGLPSENATMNMQTLDAVLACGTDGIKLHPL 216

Query: 208 TIEKGTLFYKMHKDGDL-VLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            I +G++  K  + G L  L  E        + +   +    H   IS  +  
Sbjct: 217 HIVEGSIMAKSWRAGRLETLSLEEYTATAGEMIRHTPTDILYHR--ISASARK 267


>gi|302348325|ref|YP_003815963.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15]
 gi|302328737|gb|ADL18932.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15]
          Length = 479

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+    +S    +  +  L        I F     +     
Sbjct: 206 CPYGCMYC-----ITSYYWGRRYRYRSAKNVVDEIEYLVNRYRAREIVFTDDEFT----A 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + + IA+  +   +V+ +  +    V  +  +     G N +  GV+S  +++L  
Sbjct: 257 NWRFVREFIAELKSRGLDVKFSCGSRVDHVNKDIMKLLYDNGCNALYFGVESASQETLNR 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +G+     +A       R +    +   I   P +T+   +   Q A+  + D+     L
Sbjct: 317 IGKKITIEQARRVFEWKRELKGFATGSFILGFPWETVDDMKRTAQLAVELSPDYAQFTAL 376

Query: 208 TIEKGTLFYKMHKDGDL-------VLPSENVAVDLYNLTQSITSAHGLHAYE 252
           T   GT  +      +L          +    +  ++ T        ++AY 
Sbjct: 377 TPYPGTPLWDFAVKHNLIVDTNWEHYTTVRPVMRGFHFTAEQLGRALIYAYR 428


>gi|262274718|ref|ZP_06052529.1| tRNA-i(6)A37 methylthiotransferase [Grimontia hollisae CIP 101886]
 gi|262221281|gb|EEY72595.1| tRNA-i(6)A37 methylthiotransferase [Grimontia hollisae CIP 101886]
          Length = 474

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 20/233 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R ++ +      + G     + 
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPLDDVLYEIAQLAEQ-GVREVNLLGQNVNAYRGE----MH 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +     +     I     +P     +  + Y+     V+ + L VQS  +
Sbjct: 212 DGEICSFAELLRYVAAIDGIDRIRYTTSHPIEFTDDIIEVYKDTPEVVSFLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R       +S D I   P +T   +E  ++       D
Sbjct: 272 RILTMMKRPHTAIEYKSKIRKLREARPGIAISSDFIVGFPGETDADFEATMKLIRDVNFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               +  +   GT    M  D     P +     LY L Q I +   +++ ++
Sbjct: 332 MSFSFIYSPRPGTPAADMPDDT----PEQVKKERLYELQQQINAQAMIYSRQM 380


>gi|242277845|ref|YP_002989974.1| biotin synthase [Desulfovibrio salexigens DSM 2638]
 gi|242120739|gb|ACS78435.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 338

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C K C YC     N  V RY +  ++ + +    +           + ++    G    +
Sbjct: 46  CRKNCHYCGLRCCNGQVERYSLDADSILSAARCAIDA--------GLGTVVLQSGDDKSL 97

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +P  I  I+  I     VS  + +         + + ++ +R  G +R  L +++   + 
Sbjct: 98  DPGFIGKIVQSIKAYADVSVTLCL------GDHDRDTYKYWRDCGADRYLLKMETFNSEL 151

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L    + SE +A +    ++       LI  LP  T      +L R     +D +++
Sbjct: 152 HARLRPGQSVSERLARLETLCSLGYEAGSGLITGLPGMTPEILAEDLWRLSLLPLDMIAV 211

Query: 205 YQLTIEKGTLFYKMH 219
                   T   +  
Sbjct: 212 GPFIPHPDTPLGRFW 226


>gi|296274462|ref|YP_003657093.1| radical SAM domain-containing protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296098636|gb|ADG94586.1| Radical SAM domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 486

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 91/253 (35%), Gaps = 21/253 (8%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC +C     F     RY+       +  + E++    L     I +I F      +
Sbjct: 221 CPYKCTFCCINAPFGKSTIRYRSP-----EIIVNELEL---LNTKYKIKNIKFIDEMF-V 271

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +  ++   I+D I +      ++ I   A   +++    +  ++AG+N ++LG++S    
Sbjct: 272 LHEEHYMKIVDLIIEKNL---DLNIWCYARVDTIKPYTLKRMKQAGINWLALGIESANPN 328

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
                 +     +    ++  +++  R+  + I+ L   T+   +  L  A     +  +
Sbjct: 329 VRDGASKKMRVKDIKQQVNDIQSVGIRVIGNYIFGLQDDTIESMQETLDMAKELNCEFAN 388

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            Y      G+  Y +     L LP        ++       +  + A EI        E+
Sbjct: 389 FYCAMAYPGSPLYNIALKESLELPDVWHGYSQHSYVMQPLPSKYVTAKEIVKF---RDEA 445

Query: 264 LHNLNYWRYGDYI 276
            H   Y+    Y+
Sbjct: 446 FH--EYFESSTYL 456


>gi|253563687|ref|ZP_04841144.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947463|gb|EES87745.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 311

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +  E + +  
Sbjct: 48  CTYCN-NQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTYAEFEGLKR 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
                 +  +V   V + I   P  +        +   K     +  G+++  + +L+ +
Sbjct: 107 ---KYEEALSVDGVVGLVIGTRPDCMPDPLLRYLEELNKHTFLLVEYGIETTRDVTLKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +  ++            +I  LP +T  +   +        +  L ++QL 
Sbjct: 164 NRGHTYADTVETVNRTAACGILTGGHVILGLPGETHDEIIAQAAELSRLPLTTLKMHQLQ 223

Query: 209 IEKGTLFYKMHKD 221
           + +GT   +  + 
Sbjct: 224 LIRGTKMAREFEC 236


>gi|332295064|ref|YP_004436987.1| RNA modification enzyme, MiaB family [Thermodesulfobium narugense
           DSM 14796]
 gi|332178167|gb|AEE13856.1| RNA modification enzyme, MiaB family [Thermodesulfobium narugense
           DSM 14796]
          Length = 448

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 77/205 (37%), Gaps = 15/205 (7%)

Query: 20  GVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+     C + C YC        Y  G+E   +S  + +  + Q +       I+ G 
Sbjct: 159 SAYLPISCGCNQFCTYC-----AVPYGRGREKS-RSLESILNEVSQRSKQGFKEIIYLGQ 212

Query: 79  GTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
              S  +    ++  +L+  AK     +     I + PS +     +         N  S
Sbjct: 213 NCDSYGKDIGSSLKELLELSAK--KFPNLWFKCITSYPSMITKELLETIASYDNLCNYFS 270

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQ 192
           + +QS  ++ L+ + R ++  +   +I++ R I P   ++ D I   P +T   ++  + 
Sbjct: 271 IPMQSGSDRILKLMNRKYSVEQYRNSINMIREIIPDAVITSDFIVGFPGETEKDFQDTIN 330

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
               +  D +++   +    T   K
Sbjct: 331 AIEEFKYDTVNIAIYSKRPFTPASK 355


>gi|254501345|ref|ZP_05113496.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
           DFL-11]
 gi|222437416|gb|EEE44095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
           DFL-11]
          Length = 486

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                ++  +TE Q M   +G R ++    ++    G  + 
Sbjct: 187 CDKFCTFC---VVPYTRGAEVSRSVEQIVTEAQRMAA-SGVREVTLLGQNVNAYHGEAAD 242

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  +L  +++   +      T  ++P  ++ +  + +R+    +  + L VQS  
Sbjct: 243 GSTWGLGKLLRRLSEIDGLDRLRYTT--SHPRDMDDDLIEAHRELKSLMPYLHLPVQSGS 300

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H   E    I   R   P ++   D I   P +T   +E  +        
Sbjct: 301 DKILKAMNRKHTRDEYFRLIDRIRVAAPDIALSGDFIIGFPGETDQDFEDTMDLIRRVEY 360

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                ++ +   GT    M
Sbjct: 361 GSAFSFKYSQRPGTPGATM 379


>gi|302791105|ref|XP_002977319.1| hypothetical protein SELMODRAFT_417268 [Selaginella moellendorffii]
 gi|300154689|gb|EFJ21323.1| hypothetical protein SELMODRAFT_417268 [Selaginella moellendorffii]
          Length = 185

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            + +TIE  P      + +     G  R+ +GVQS  E   R   R H  +       LA
Sbjct: 46  CIGLTIETRPDYCLSPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 105

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++   ++  L    M +     +       +  D L +Y+  + +GT  Y++ K 
Sbjct: 106 KDAGFKVVAHMMPNLRNVDMERDMESFREFFENHSFRADGLKIYRTLVIQGTGLYELWKT 165

Query: 222 GDLVLPSENV 231
           G         
Sbjct: 166 GRYKNYPPEQ 175


>gi|15674248|ref|NP_268423.1| hypothetical protein L142355 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12725337|gb|AAK06364.1|AE006455_10 hypothetical protein L142355 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326407898|gb|ADZ64969.1| radical SAM superfamily protein [Lactococcus lactis subsp. lactis
           CV56]
          Length = 313

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 20/235 (8%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +      F  E+    +         ++F   T +    + +  
Sbjct: 43  CTFCTVSGSGDMILEPEAPIADQFAAEVAQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
             +       V   V I+I   P  +  +      +   NR     I LG+Q+  E++  
Sbjct: 103 RFEQAVNQPDV---VGISIGTRPDCLPDDVVDYLAEL--NRRMEVWIDLGLQTTYEETSD 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLY 205
            + R H+    + A+   R     +   LI  LP +T       ++R  L   +  + L+
Sbjct: 158 LINRAHDYETYVDAVKRLRVHNINVCTHLINGLPGETSEMMLENVRRMVLDSDIQGVKLH 217

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L + K T   + + +G L L S+          + I     +   EI  H   G
Sbjct: 218 LLHLMKQTRLQRDYHEGKLQLMSQE------EYVKVICDQLEMIPKEIVIHRLTG 266


>gi|313888876|ref|ZP_07822536.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845049|gb|EFR32450.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 302

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 79/202 (39%), Gaps = 10/202 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        ++  + +  +  L  M  +++    +   + +F   T + +  ++   
Sbjct: 41  CIFCG--EEGGSFENSEGSVREQLLKNMDHIKKKYKAKKFIA-YFQNFTNTYMPFEDFKR 97

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +++       +   V ++I   P  +    ++  +   K     + +G+Q+    SL+ L
Sbjct: 98  VIEESL----IEDVVGLSISTRPDYLPKRHLDYLEELNKKYFVTLEIGLQTANYHSLKKL 153

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E I A    +     +   +I  LP           +   + +VD + L+ L 
Sbjct: 154 NRGHGLAEFIDAAIKLKKRNLNICTHMIVGLPWDDDLDIVEGAKILNALSVDEVKLHALY 213

Query: 209 IEKGTLFYKMHKDGDLVLPSEN 230
           I KGT   KM++ G++   S  
Sbjct: 214 ILKGTALGKMYERGEIEPISLE 235


>gi|291461072|ref|ZP_06026746.2| radical SAM domain protein [Fusobacterium periodonticum ATCC 33693]
 gi|291379136|gb|EFE86654.1| radical SAM domain protein [Fusobacterium periodonticum ATCC 33693]
          Length = 295

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 9/217 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C     + + K      I+   +++   R L   R +  IF   G   ++  
Sbjct: 25  CSHNRCTFCS----MYKDKKFVIKPIEDIKSDIDAFRALYKNRPVEKIFLADGDALVVST 80

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L
Sbjct: 81  DILLQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDEAL 140

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHL 202
           +F+ +   A + +       +    +S  LI  L               +     +  + 
Sbjct: 141 KFIKKGIKAEKVVELSKKIMSAGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYA 200

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           S+  L + +GT  Y + + G          +    L 
Sbjct: 201 SILNLRLYEGTELYDLMQQGKYDYMEGIEVLKEMKLI 237


>gi|315231263|ref|YP_004071699.1| tRNA N6-threonylcarbamoyladenosine 2-methylthiotransferase
           [Thermococcus barophilus MP]
 gi|315184291|gb|ADT84476.1| tRNA N6-threonylcarbamoyladenosine 2-methylthiotransferase
           [Thermococcus barophilus MP]
          Length = 424

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 88/244 (36%), Gaps = 27/244 (11%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC   F   + +     E  ++     +    +     S  +  +G    +   
Sbjct: 143 CLNACTYCATRFARGILKSYSP-EKIVRWVKEALAKGYKEIQLSSEDTGCYGFDIGT--- 198

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAGV-NRISLGVQSL 140
             N+A +LD +     +     I +   NP+ V          Y+   +   + L VQS 
Sbjct: 199 --NLAELLDELTS---IEGEFRIRVGMMNPNHVIKFLDELIDAYKDEKIYKFLHLPVQSG 253

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + + LR +GR +   +    +   R  FP   ++ D+I   P ++   ++  ++      
Sbjct: 254 DNEILRKMGRTYTVEDFETIVKAFRKEFPELNLNTDIIVGFPGESEEAFQNTVELIKRVK 313

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D +++ + +   GTL  +M                   L +   +     +YEI N  +
Sbjct: 314 PDKINVSRFSPRPGTLAARMPDQIVGW----RAKERSRYLHRLRLAI----SYEI-NQKY 364

Query: 259 LGAE 262
           +G E
Sbjct: 365 VGRE 368


>gi|217964189|ref|YP_002349867.1| radical SAM protein, family [Listeria monocytogenes HCC23]
 gi|217333459|gb|ACK39253.1| radical SAM protein, family [Listeria monocytogenes HCC23]
 gi|307571244|emb|CAR84423.1| radical SAM family protein [Listeria monocytogenes L99]
          Length = 321

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S         +  +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGDRALD-LKIQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|218883344|ref|YP_002427726.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis
           1221n]
 gi|218764960|gb|ACL10359.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis
           1221n]
          Length = 439

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP---- 81
           C   C YC   S++    Y+      I  ++ EM  +  +   R I+      G      
Sbjct: 181 CPYGCLYC-QVSYIHGMSYRHRSIEKIVFYVKEMARIG-VRDYRFITPDSLSYGLTKISR 238

Query: 82  ---SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGV 137
              + +  + ++ I   +              E  P  V  +  +  RK   NR I +G 
Sbjct: 239 EPDTGLIEELLSSIHSALRSIGGRIFYGSFPSEVRPEHVNKDVVRVLRKYVNNREIIVGA 298

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   + LR + R H+  + + A+          S D+I  +P +T    E+ L+     
Sbjct: 299 QSGSNRVLRLIRRGHSVEDVLNAVKEISENGFTPSVDIILGIPGETREDQELTLELIDEV 358

Query: 198 --AVDHLSLYQLTIEKGTLF 215
                 + ++      G+  
Sbjct: 359 IRNNGRIHIHYYLPLPGSPL 378


>gi|320006771|gb|ADW01621.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 482

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 11/171 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +++ G      S    ++ +R+L        I            +
Sbjct: 209 CSYACAYC-----YSKHQWGVGQRRHSADRVIEEIRELVEVHGFDRIRIEDDDF----VE 259

Query: 88  NIALILDGIA--KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           ++  + +     +   +    E   +A P  ++ +  +  R +G  R+ +GV++L+   L
Sbjct: 260 DVPRMQELCRSIEKSGLQGKFEWEAKARPDLIDDDMARMLRDSGCFRLLVGVETLDWSLL 319

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           + LGR         A+         +   LI  +P +T       +    S
Sbjct: 320 KRLGRPVKVDVTERALSSLSKAGIGVQATLILGIPGETDEAMRSTITWLQS 370


>gi|153840169|ref|ZP_01992836.1| Fe-S oxidoreductase [Vibrio parahaemolyticus AQ3810]
 gi|149746178|gb|EDM57296.1| Fe-S oxidoreductase [Vibrio parahaemolyticus AQ3810]
          Length = 191

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 2/139 (1%)

Query: 121 NFQGYRKAGVNRI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
               Y   G      LG+Q+    +L+ + R H+          AR +  ++   LI  L
Sbjct: 1   MLSDYVNQGYEIWLELGLQTANNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGL 60

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           PK+T       LQ+ L+   D + L+ L I +G+   K  + G L  P     V + +  
Sbjct: 61  PKETRDDNIETLQKVLAVGTDGIKLHGLHIVEGSTMAKAWRAGRLEAPGLEEYVAIASEM 120

Query: 240 QSITSAHGLHAYEISNHSF 258
             +T A  +    +S+ + 
Sbjct: 121 IRMTPADVVFH-RVSSAAR 138


>gi|15897406|ref|NP_342011.1| histone acethyltransferase, putative [Sulfolobus solfataricus P2]
 gi|227830614|ref|YP_002832394.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.S.2.15]
 gi|229579497|ref|YP_002837895.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.G.57.14]
 gi|284998141|ref|YP_003419908.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.D.8.5]
 gi|13813635|gb|AAK40801.1| Histone acethyltransferase, putative [Sulfolobus solfataricus P2]
 gi|227457062|gb|ACP35749.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.S.2.15]
 gi|228010211|gb|ACP45973.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.G.57.14]
 gi|284446036|gb|ADB87538.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           L.D.8.5]
          Length = 473

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 97/273 (35%), Gaps = 21/273 (7%)

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PS  +P  + L    +         V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 115 FPSYDKPSFVYLEDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALS 196
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK    +       +    +
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPKSDPDKDLEAFKTIFSDPN 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEI 253
           +  D L +Y   + +      + + G          ++L +                 +I
Sbjct: 235 FRPDMLKIYPTLVVETAPLANLWRRGLYKPYGTETLIELISEMYRYIPKWVRVMRIQRDI 294

Query: 254 SNHSFLGAESLHNLNYWRYGDYI--GIGPGAHSRVKVGSHRVAISIEKH-----PESWLK 306
             +  L      NL        +  GI      ++     R    + +H       + + 
Sbjct: 295 PANVILDGNKKGNLRELVEKKVLEKGI------KINEIRFREVGMMWQHRGLLPDHTKIH 348

Query: 307 MVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLR 338
           + ++   A    E FLS E +  E L+  LRLR
Sbjct: 349 LYKEVYEASEGTEIFLSFEDEK-EILIGYLRLR 380


>gi|329847364|ref|ZP_08262392.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum
           C19]
 gi|328842427|gb|EGF91996.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum
           C19]
          Length = 448

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                + + L E Q +    G R ++    ++    G  S 
Sbjct: 161 CDKFCTFC---VVPYTRGAEWSRPVAAILDEAQALAA-KGVRELTLLGQNVNAFNGVGSD 216

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +P  +A ++  +A    +      T  ++P+ +  +    +R  G  +  + L VQS  
Sbjct: 217 GQPSTLAKLMYALADIPGIDRLRYTT--SHPNDMGDDLIAAHRDLGAAMPYLHLPVQSGS 274

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R H        +   +   P ++   D I   P +T   +E  L        
Sbjct: 275 DKILRAMNRKHGRQAYFDLVARIKAARPDLALSGDFIVGFPGETDKDFEDTLDLVRQVGY 334

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                ++ +   GT    M       +  E +      + + 
Sbjct: 335 ASAFTFKYSPRPGTPAASMPNQVPEAVMDERLQTLNALIIEQ 376


>gi|322418141|ref|YP_004197364.1| cobalamin B12-binding domain-containing protein [Geobacter sp. M18]
 gi|320124528|gb|ADW12088.1| cobalamin B12-binding domain protein [Geobacter sp. M18]
          Length = 474

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 78/235 (33%), Gaps = 20/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      ++    ++      L  ++ + QL     ++        P+  +  
Sbjct: 206 CSHDCAFCSQQQFWQKSWRARDP-----LKVVEEVAQLHRRYGVNVFLVTDEHPTR-DAA 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               +LD + +       + + +E     V  +   F  YRKAGV  +SLG++S + Q L
Sbjct: 260 RWETLLDALIEEGL---PIHLILETRAEDVVRDREIFWKYRKAGVVHVSLGIESADRQLL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             LG+      A  A+ +            I   P +T    +  L+ A  Y  D+ + +
Sbjct: 317 ERLGKGMQPDVAKEALEIIHRHDIVSEASFILGFPDETPATVQATLKMAQQYNPDNANFF 376

Query: 206 QLTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            LT       Y+          +   + + P            Q   +      Y
Sbjct: 377 ALTPWPYGGMYRELKPLIRETDYARYNFIDPVLEPEAMSLKELQGALNDCYRRFY 431


>gi|229816649|ref|ZP_04446938.1| hypothetical protein COLINT_03698 [Collinsella intestinalis DSM
           13280]
 gi|229807777|gb|EEP43590.1| hypothetical protein COLINT_03698 [Collinsella intestinalis DSM
           13280]
          Length = 642

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 52/131 (39%), Gaps = 4/131 (3%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + +E  P ++  ++    R  G  ++ +G+QSL++  L    R    S+   A  L R
Sbjct: 295 VGLVVETRPDAITPDSLTIIRHLGCTKVQMGIQSLDQAVLDANDRGIEISQIERAFELLR 354

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++    +  L   T  + + +  R +    +  D + LY   + +G    +  + G
Sbjct: 355 VFGFKIHAHAMVNLLGSTPERDKDDYLRLVRGLPFQPDEIKLYPCALIEGARLQERFEAG 414

Query: 223 DLVLPSENVAV 233
           +   P     +
Sbjct: 415 E-WAPYSEAEL 424


>gi|229581815|ref|YP_002840214.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.N.15.51]
 gi|228012531|gb|ACP48292.1| histone acetyltransferase, ELP3 family [Sulfolobus islandicus
           Y.N.15.51]
          Length = 473

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 98/273 (35%), Gaps = 21/273 (7%)

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            PS  +P  + L    +         V +TIE  P   +  +     + G  ++ LGVQ+
Sbjct: 115 FPSYDKPSFVYLEDAQVKNEKAEVRCVGMTIETKPDWAKEWHADQMLRLGATKVELGVQT 174

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALS 196
           + +  L+F  R H   ++I +  + ++   ++ + ++  LPK  + +       +    +
Sbjct: 175 VYDDILKFTNRGHTVKDSIESTRILKDSGFKVVYHVMLGLPKSDLDKDLEAFKTIFSDPN 234

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH---GLHAYEI 253
           +  D L +Y   + +      + + G          ++L +                 +I
Sbjct: 235 FRPDMLKIYPTLVVETAPLANLWRRGLYKPYGTETLIELISEMYRYIPKWVRVMRIQRDI 294

Query: 254 SNHSFLGAESLHNLNYWRYGDYI--GIGPGAHSRVKVGSHRVAISIEKH-----PESWLK 306
             +  L      NL        +  GI      ++     R    + +H       + + 
Sbjct: 295 PANVILDGNKKGNLRELVEKKVLEKGI------KINEIRFREVGMMWQHRGLLPDHTKIH 348

Query: 307 MVRKNGHAVVEKE-FLSSEQQADEFLMMGLRLR 338
           + ++   A    E FLS E +  E L+  LRLR
Sbjct: 349 LYKEVYEASEGTEIFLSFEDEK-EILIGYLRLR 380


>gi|269216995|ref|ZP_06160849.1| putative elongator complex protein 3 [Slackia exigua ATCC 700122]
 gi|269129802|gb|EEZ60886.1| putative elongator complex protein 3 [Slackia exigua ATCC 700122]
          Length = 603

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 6/167 (3%)

Query: 89  IALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +     +N T     V + +E  P +++  +    R+ G  +I +G+QSL+ + L  
Sbjct: 255 LQELESEQRRNETARRRVVGLVVETRPDAIDARSLTLARRLGCTKIQIGIQSLDGRVLEA 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSL 204
             R  + +    A  L R    ++    +  L  QT    + + +  +   ++  D + L
Sbjct: 315 NDRQVDLNSIEHAFELMRAFGFKLHTHFMVNLYGQTPESDKRDYREFVTNPAFLPDEVKL 374

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           Y   +  GT    +++ G L  P     +    L   + ++      
Sbjct: 375 YPCALVAGTGLVDLYEAG-LWRPYGEDELLDI-LVADVLASAPYTRI 419


>gi|284115804|ref|ZP_06386693.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829554|gb|EFC33903.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 436

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C KKC YC     V   +  +   +   + ++    +    + +  I   G T   +   
Sbjct: 154 CNKKCAYC----IVPTVRGSE---VNRPIEDIIAEARYLIAKGVKEITLIGQT---VNSW 203

Query: 88  NIALIL--DGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            +  +   D +     +     I    + P  +     +           I L VQS  +
Sbjct: 204 KLGGLKFGDLLRVLGELDGLERIRFTTSYPRDITKKMVEAMADVPKVCRHIHLPVQSGSD 263

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR + R ++ S  I +++  R+  P +  S D+I   P +T   +E  +        D
Sbjct: 264 KVLRLMNRTYSRSWYIDSVNRLRDAMPNIAVSSDIIVGFPGETEDDFEQTMSLVEEVGFD 323

Query: 201 HLSLYQLTIEKGT 213
               ++ +   GT
Sbjct: 324 SSFSFKYSPRPGT 336


>gi|242399008|ref|YP_002994432.1| Probable 2-methylthioadenine synthetase [Thermococcus sibiricus MM
           739]
 gi|242265401|gb|ACS90083.1| Probable 2-methylthioadenine synthetase [Thermococcus sibiricus MM
           739]
          Length = 424

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 84/242 (34%), Gaps = 23/242 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+  C YC      R  +   +++    + +        G + I       G        
Sbjct: 146 CLNACTYCA----TRFARGVLKSYKPGLIVKWVKEAVAKGYKEIQLSSEDTGCYGFDIGT 201

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGVQSLEE 142
           N+A +LD I     +     I +   NP++   V     + Y+   +   + L VQS + 
Sbjct: 202 NLARLLDEITS---IEGEFRIRVGMMNPNNAVKVLDELIEAYKDNKIYKFLHLPVQSGDN 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR +   E    +   R       ++ D+I   P ++   ++  ++       D
Sbjct: 259 EILKRMGRPYTVEEFEEIVREFRKHIKDLNLNTDIIVGFPGESEEAFQNTVELIKRVRPD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +++ + +   GT+  +M          E                    +YEI N  +LG
Sbjct: 319 KINVSRFSPRPGTVAARMKDQIVGWRVKERSRYLH--------RLRLSISYEI-NRRYLG 369

Query: 261 AE 262
            E
Sbjct: 370 RE 371


>gi|147677890|ref|YP_001212105.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI]
 gi|146273987|dbj|BAF59736.1| Fe-S oxidoreductase [Pelotomaculum thermopropionicum SI]
          Length = 289

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 11/230 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C       + K  +         ++   ++      +  IF   G    ++   +  
Sbjct: 30  CTFCG----AYKDKKFRVKSWLEIEADILIAKRYLD--RVKRIFLADGNAMALDSSLLIK 83

Query: 92  ILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            L  +   +     V I   A +    +    +  +++G+  +  G++S  ++ L+ + +
Sbjct: 84  TLKMLYHEFPFLERVGIYAGAQDILRKQPEELKELKESGLGIVYFGLESGSDKILKMVRK 143

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLT 208
               ++ I A  +       +S  +I  L  Q  +            +   D+LS   L 
Sbjct: 144 GVTPAQMIEACKMVMEAGLTLSVTVIAGLGGQDLSEEHAIETASAVSAINPDYLSTLSLM 203

Query: 209 IEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           + +GT  Y+  + G+  L  P + +      L           +   SN+
Sbjct: 204 VVEGTPLYEQVRRGEFKLLTPVQYLKEIKLMLENVSLKNCIYRSNHASNY 253


>gi|157363802|ref|YP_001470569.1| putative radical SAM protein [Thermotoga lettingae TMO]
 gi|157314406|gb|ABV33505.1| conserved hypothetical radical SAM protein [Thermotoga lettingae
           TMO]
          Length = 299

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 86/237 (36%), Gaps = 25/237 (10%)

Query: 28  CVKK-----CPYCD-----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +     C +CD     FN++      G     Q    + +  ++    + I+  +F 
Sbjct: 30  CPNREKGKPCIFCDPAGSGFNAY-----HGLSIRDQVLKQKERATQKYKAKKFIA--YFQ 82

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNRI 133
             T +      + ++ +   +     S V+++I   P  +     +      +K  V+ I
Sbjct: 83  AFTNTYAP---LHVLREKYEQAIVDESIVQLSISTRPDCIPNEVLELLENFKKKVDVS-I 138

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++  ++LR + R H  +E + A+  A+     +   +I  LP   +       + 
Sbjct: 139 ELGLQTINSKTLRIIQRGHGIAEFVDAVLRAKMHNIEIVVHVIVDLPWDDLEDVIDTART 198

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                V+ + L+ L + + T    +  + ++         D         S H +  
Sbjct: 199 LSYLGVNGVKLHSLYVVRNTPLENIFINREVDFIGFKEYKDRVVAFLENLSPHVVIH 255


>gi|224476428|ref|YP_002634034.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222421035|emb|CAL27849.1| putative radical SAM superfamily protein [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 513

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 75/234 (32%), Gaps = 20/234 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C K C YC   F     R +  Q+         +  +R L           G    S   
Sbjct: 222 CDKFCTYCIVPFTRGKERSRRPQD--------IIDEVRDLARQGYQEITLLGQNVNSYGK 273

Query: 84  -IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            ++      + D       +         ++P     +      K G  V  I L VQS 
Sbjct: 274 DLKDIEYD-LGDLFEDISKIDIPRVRFTTSHPWDFTDHMIDVIAKGGNIVPHIHLPVQSG 332

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR +     +  ++  +   P ++   D+I   P +T  Q++  L       
Sbjct: 333 NDAVLKIMGRKYTRESYLDLVNRIKTAIPDVALTTDIIVGYPNETEEQFQETLSLYDEVE 392

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            +H   Y  +   GT   +M  + +  +  + +      +     S   L  YE
Sbjct: 393 FEHAYTYLYSQRDGTPAARMKDNVEKEVKKDRLQRLNQKVG--YYSERALKGYE 444


>gi|93006871|ref|YP_581308.1| tRNA-i(6)A37 modification enzyme MiaB [Psychrobacter cryohalolentis
           K5]
 gi|123386578|sp|Q1Q929|MIAB_PSYCK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|92394549|gb|ABE75824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychrobacter
           cryohalolentis K5]
          Length = 497

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 72/227 (31%), Gaps = 16/227 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  +    G R I+ +      + G      +
Sbjct: 205 CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAAQ-GVREINLLGQNVNGYRGEK----D 259

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     V     I     +P     +    Y +    V+ + L VQS   
Sbjct: 260 DGSICRFAELLHYVSHVDGVERIRYTTSHPLEFTDDIIDAYAQLPELVSHLHLPVQSGSN 319

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + RNH     I  I+  + I P +  S D I   P +T   ++  L  A     D
Sbjct: 320 AILAAMKRNHTIDVYINQINKLKAIRPDIHLSSDFIIGFPGETDQDFQDTLNLAKELNFD 379

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           H   +  +   GT   ++  D       E +A     +  S  +   
Sbjct: 380 HSYSFIYSKRPGTPAAELPDDVSFKTKKERLAEFQKVIIDSTLAKTH 426


>gi|91974724|ref|YP_567383.1| tRNA-i(6)A37 modification enzyme MiaB [Rhodopseudomonas palustris
           BisB5]
 gi|123763150|sp|Q13EK7|MIAB_RHOPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91681180|gb|ABE37482.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopseudomonas
           palustris BisB5]
          Length = 473

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 16/218 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + + + +++ +    G R I+ I      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGAEVSRPVSAIIDDVKRLAD-NGVREITLIGQNVNAYHGEGPD 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  +A    +      T  ++P+ V+    + +R     +  + L VQS 
Sbjct: 222 S-RAWTLGRLLRRLAAVPGIVRLRYST--SHPNDVDDELIEAHRDLDALMPFVHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R H A++    I    A       S D I   P +T   +   L       
Sbjct: 279 SDPILAAMNRKHTAADYRRVIDRFRAVRPQIAFSSDFIVGFPGETEADFAATLALVTQIG 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
                 ++ +   GT    M +     +  E +     
Sbjct: 339 YAGAYSFKYSPRPGTPAADMQEMVPAAVMDERLERLQQ 376


>gi|258416055|ref|ZP_05682323.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9763]
 gi|257839203|gb|EEV63679.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9763]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|297208061|ref|ZP_06924492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|296887304|gb|EFH26206.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus ATCC 51811]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|15924282|ref|NP_371816.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926875|ref|NP_374408.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus N315]
 gi|21282904|ref|NP_645992.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49486131|ref|YP_043352.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|148267782|ref|YP_001246725.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150393841|ref|YP_001316516.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus JH1]
 gi|156979613|ref|YP_001441872.1| hypothetical protein SAHV_1282 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253733470|ref|ZP_04867635.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006079|ref|ZP_05144680.2| hypothetical protein SauraM_06400 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795652|ref|ZP_05644631.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9781]
 gi|258421638|ref|ZP_05684562.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9719]
 gi|258434794|ref|ZP_05688868.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus A9299]
 gi|258444630|ref|ZP_05692959.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8115]
 gi|258447537|ref|ZP_05695681.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A6300]
 gi|258449379|ref|ZP_05697482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A6224]
 gi|258454758|ref|ZP_05702722.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A5937]
 gi|269202909|ref|YP_003282178.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282892780|ref|ZP_06301015.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8117]
 gi|282927634|ref|ZP_06335250.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A10102]
 gi|295406229|ref|ZP_06816036.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8819]
 gi|296274850|ref|ZP_06857357.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus MR1]
 gi|297244457|ref|ZP_06928340.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8796]
 gi|300912143|ref|ZP_07129586.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|81649395|sp|Q6G9S1|MIAB_STAAS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81704466|sp|Q7A110|MIAB_STAAW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81705771|sp|Q7A5W3|MIAB_STAAN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81781679|sp|Q99UI1|MIAB_STAAM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891002|sp|A7X1T3|MIAB_STAA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891003|sp|A6U1B1|MIAB_STAA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891004|sp|A5ISH6|MIAB_STAA9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|13701092|dbj|BAB42387.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247062|dbj|BAB57454.1| similar to tRNA 2-methylthioadenosine synthase [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21204343|dbj|BAB95040.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244574|emb|CAG43003.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|147740851|gb|ABQ49149.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946293|gb|ABR52229.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156721748|dbj|BAF78165.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253728524|gb|EES97253.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789624|gb|EEV27964.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9781]
 gi|257842324|gb|EEV66749.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9719]
 gi|257849155|gb|EEV73137.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus A9299]
 gi|257850123|gb|EEV74076.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8115]
 gi|257853728|gb|EEV76687.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A6300]
 gi|257857367|gb|EEV80265.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A6224]
 gi|257863141|gb|EEV85905.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A5937]
 gi|262075199|gb|ACY11172.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282590637|gb|EFB95714.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A10102]
 gi|282764777|gb|EFC04902.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8117]
 gi|285816974|gb|ADC37461.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus 04-02981]
 gi|294968817|gb|EFG44839.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8819]
 gi|297178487|gb|EFH37733.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A8796]
 gi|300886389|gb|EFK81591.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|312829686|emb|CBX34528.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315131086|gb|EFT87070.1| hypothetical protein CGSSa03_06074 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727394|gb|EGG63850.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|293400769|ref|ZP_06644914.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305795|gb|EFE47039.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 479

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 85/241 (35%), Gaps = 24/241 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   ++    +Q +RQL           G    S    +
Sbjct: 198 CDKFCTYC-----IVPYTRGKERS-RAMEDVLQEIRQLKQDGYKEITLLGQNVNSYGKDL 251

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +     L        +      T  ++P            +    +  I L VQS ++
Sbjct: 252 HIEGGFAKLLEETAKIGIERIRFTT--SHPWDFSDEMIDVIARFDNIMPFIHLPVQSGDD 309

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR + +++ +   H  +   P   +S D+I   P ++  Q++  L        D
Sbjct: 310 EILKIMGRRYTSAQYLTLFHKIKERMPECAISTDIIVGFPNESEEQFQHTLDLVKECQFD 369

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           +   +  +  +GT   +M     L +    +A           +A   H   + N ++LG
Sbjct: 370 NAFTFIYSPREGTPAARMADSVSLEVKQRRLAE---------LNACWNHYAHVKNEAYLG 420

Query: 261 A 261
            
Sbjct: 421 K 421


>gi|314933472|ref|ZP_07840837.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus caprae
           C87]
 gi|313653622|gb|EFS17379.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus caprae
           C87]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 78/231 (33%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +R+L           G    S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIINEVRELAREGYQEITLLGQNVNSYGKDI 276

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +++   + D +     +         ++P        +     G  V  I L VQS    
Sbjct: 277 EDLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGNNA 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  ++  +   P ++   D+I   P +T  Q+E  L        +H
Sbjct: 337 VLKIMGRKYTRESYLDLVNRIKTAIPNIALTTDIIVGYPNETEEQFEETLSLYDEVEFEH 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              Y  +   GT   KM  +    +  E +      + +   S   +  YE
Sbjct: 397 AYTYLYSQRDGTPAAKMKDNVPTEVKKERLQRLNKKVGE--YSQKAMSQYE 445


>gi|310824425|ref|YP_003956783.1| hypothetical protein STAUR_7200 [Stigmatella aurantiaca DW4/3-1]
 gi|309397497|gb|ADO74956.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 431

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 29/207 (14%)

Query: 28  CVKKCPYC--DF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+  C +C   F N    R++  +       + E   + + +G R I  I     TP+ +
Sbjct: 186 CIYACRFCQTPFLNKARFRHRSVRN------VAEWARVLRASGRRDIRFI-----TPTSL 234

Query: 85  E---------PQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAGVN- 131
                      + +  +L  + +       +       E  P  V        ++   N 
Sbjct: 235 SYGSGDEAVNLEAVEALLAALREAMAPEGRIFFGTFPSEVRPEHVTPEALALLKRYVAND 294

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G QS  E+ LR   R H+    + ++ +A       + D I  LP +     E  +
Sbjct: 295 NLIIGGQSGSERILRSSHRGHDTEAVVRSVRVALEGGFLPNVDFILGLPGEGPEDIEATV 354

Query: 192 QRALSYAVDHLSLYQLTIE--KGTLFY 216
           +   + A     ++  T     GT F 
Sbjct: 355 RMMETLAGLGARVHGHTFMPLPGTPFR 381


>gi|218782145|ref|YP_002433463.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763529|gb|ACL05995.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 450

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 15/229 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C    + RR    +   +  FL E +W  +  G +++  +             
Sbjct: 209 CPGKCNFCYMGMYGRR---VRRKSVDRFLDETEWAVRKMGLKNVYFMDLEFAI------- 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +LD           +    +   + ++    Q   +AG + I  GV++  ++ L+ 
Sbjct: 259 NKRFVLDFCQGLEDRGLILNWCCQTRVTDMDEEVAQAMAQAGCSLIHFGVEAGTDRILKQ 318

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            G+     +   A+ L ++   R +  + +  P +   + E  ++ AL+   D+ + + +
Sbjct: 319 TGKGILVKDCYKAVRLCKSFGIRTALFMNFGFPGEHDYEMEATIKLALNLDPDYAAFHLI 378

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLY-----NLTQSITSAHGLHAY 251
               GT             P+       +        + +        Y
Sbjct: 379 VPFPGTALADNCGLNPENFPAHQYPHYNFFDHDLEKLKRMLHQAYWKFY 427


>gi|320140890|gb|EFW32737.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MRSA131]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|313618589|gb|EFR90561.1| radical SAM protein, family [Listeria innocua FSL S4-378]
          Length = 321

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        I LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWIELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|317130008|ref|YP_004096290.1| hypothetical protein Bcell_3317 [Bacillus cellulosilyticus DSM
           2522]
 gi|315474956|gb|ADU31559.1| conserved hypothetical protein [Bacillus cellulosilyticus DSM 2522]
          Length = 318

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 72/222 (32%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C            +++ +  F   ++              +F   T +    + +  
Sbjct: 52  CTFCSERGSGDFAGDRKDDLVTQF-KTIKEKLHQKWKAGKYIGYFQAYTNTYAPVEELRE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + + I +       V ++I   P  +  +  +   +        + LG+Q++ E++   +
Sbjct: 111 MFEVILEQ---DDVVGLSIATRPDCLPDDVVEYLAELNKRTYLWVELGLQTVHERTADLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R    R+   +I  LP +T        Q      V  + ++ L 
Sbjct: 168 NRAHDYECYKEGVDKLRKHNIRVCSHIINGLPLETKDMMLETAQEVAKLDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + K T   K ++ G L   S    + L      +     +  
Sbjct: 228 LLKKTPMVKQYEKGLLEFMSSEEYIQLVCDQLEVLPPEMIIH 269


>gi|269940783|emb|CBI49165.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
           aureus TW20]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|57651862|ref|YP_186168.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus COL]
 gi|87160782|ref|YP_493882.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88195002|ref|YP_499802.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|151221413|ref|YP_001332235.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161509458|ref|YP_001575117.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221142526|ref|ZP_03567019.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258452591|ref|ZP_05700597.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A5948]
 gi|262048179|ref|ZP_06021066.1| hypothetical protein SAD30_1955 [Staphylococcus aureus D30]
 gi|262051352|ref|ZP_06023575.1| hypothetical protein SA930_2074 [Staphylococcus aureus 930918-3]
 gi|282920536|ref|ZP_06328257.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9765]
 gi|284024285|ref|ZP_06378683.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus 132]
 gi|294848288|ref|ZP_06789035.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9754]
 gi|304381143|ref|ZP_07363796.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|81694614|sp|Q5HGD9|MIAB_STAAC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123407056|sp|Q2FZ02|MIAB_STAA8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123486136|sp|Q2FHE6|MIAB_STAA3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891005|sp|A6QGJ1|MIAB_STAAE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891006|sp|A8Z1W3|MIAB_STAAT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|57286048|gb|AAW38142.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus COL]
 gi|87126756|gb|ABD21270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87202560|gb|ABD30370.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374213|dbj|BAF67473.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160368267|gb|ABX29238.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257859809|gb|EEV82651.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A5948]
 gi|259160727|gb|EEW45748.1| hypothetical protein SA930_2074 [Staphylococcus aureus 930918-3]
 gi|259163745|gb|EEW48300.1| hypothetical protein SAD30_1955 [Staphylococcus aureus D30]
 gi|282594198|gb|EFB99185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9765]
 gi|294825088|gb|EFG41510.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9754]
 gi|302751114|gb|ADL65291.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304340126|gb|EFM06067.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315198534|gb|EFU28863.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320143843|gb|EFW35615.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329313962|gb|AEB88375.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329727801|gb|EGG64252.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLNVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|262377253|ref|ZP_06070477.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii
           SH145]
 gi|262307706|gb|EEY88845.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii
           SH145]
          Length = 485

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 61/192 (31%), Gaps = 12/192 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF---GGGTPSLIEPQ 87
           C  YC F              +   L E+  + +  G R IS +     G    +     
Sbjct: 194 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETF--EG 250

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           NI    D +     +     I     +P     +  Q YR     V+ + L VQS     
Sbjct: 251 NICTFADLLRLVADIPGIGRIRYTTSHPLEFNDDLIQCYRDLPQMVSHLHLPVQSGSNDV 310

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + RNH     I  I    A      +S D I   P +T   +E   Q       DH 
Sbjct: 311 LQAMKRNHTIDVYIEKIKKLRAVRPDMHLSSDFIIGFPGETDENFEETYQFIQDLDFDHS 370

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 371 YSFIYSKRPGTP 382


>gi|256545096|ref|ZP_05472462.1| TIGR01212 family radical SAM protein [Anaerococcus vaginalis ATCC
           51170]
 gi|256399137|gb|EEU12748.1| TIGR01212 family radical SAM protein [Anaerococcus vaginalis ATCC
           51170]
          Length = 318

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 73/182 (40%), Gaps = 12/182 (6%)

Query: 57  TEMQWMRQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            +++  +   G R        +F   + + +E +    I++   K + V+    I+I   
Sbjct: 66  RQLEINKNYIGSRYKAKKFIAYFQNFSNTYVEFEKFKNIIEACNKEYIVA----ISISTR 121

Query: 114 PSSVEVNNFQGY----RKAGVNRI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              +            +K G++ I  LG+Q+   ++L+ L R  + ++ I A ++     
Sbjct: 122 SDCITYKKLDFLSDFSKKTGIDIIIELGLQTANYKTLKILNRCEDLADFIKACNMINEYG 181

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            R+   +I +LP           +      V  + ++ L + K T    M++D +  +PS
Sbjct: 182 FRICTHVILSLPWDDDEDIIETARIINVLRVKEVKIHSLFVIKNTKLEMMYQDNEFKMPS 241

Query: 229 EN 230
           + 
Sbjct: 242 KE 243


>gi|88606847|ref|YP_505456.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Anaplasma phagocytophilum
           HZ]
 gi|123494765|sp|Q2GJJ5|MIAB_ANAPZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|88597910|gb|ABD43380.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Anaplasma phagocytophilum
           HZ]
          Length = 444

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 88/247 (35%), Gaps = 18/247 (7%)

Query: 10  NMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           ++  + +  +  YV     C K C +C     V  Y  G E + +     ++ ++QLT  
Sbjct: 136 SIDRKANGGVSAYVSIQEGCDKFCTFC-----VVPYTRGPE-YSRDVEAILEEVKQLTDR 189

Query: 69  RSISSIFFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            +   +  G    +          ++  ++  ++    V      T  ++P  +  + ++
Sbjct: 190 GTKEIVLIGQNVNAYHGTYKGNEWDLGKLIQKVSLIDGVERIRYTT--SHPRDMHPSLYE 247

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYAL 179
            +R        + L VQS  +  LR + R H A E +  +   ++      +S D I   
Sbjct: 248 AHRDEKKLAPFVHLPVQSGSDAILRKMNRKHTAEEYLRVVEQLKDSNKNMALSSDFIVGF 307

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T   +E  ++   S        ++ +   GT   +          S  +A     LT
Sbjct: 308 PGETEKDFEETMKLVESVGFALSYSFKYSPRPGTPGAEYSNQVPEEEKSARLAALQGLLT 367

Query: 240 QSITSAH 246
           +     +
Sbjct: 368 KQQLQFN 374


>gi|329733662|gb|EGG69990.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|229544354|ref|ZP_04433413.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus coagulans 36D1]
 gi|229325493|gb|EEN91169.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus coagulans 36D1]
          Length = 515

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 224 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRELAAKGYKEITLLGQNVNAYGKDF 277

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +E   +  ++D + K             ++P   +    +   K G  V  I L VQS
Sbjct: 278 DDLE-YGLGDLMDDLRKINIPRIRF---TTSHPRDFDDRLIEVLAKKGNLVEHIHLPVQS 333

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   + +  +   +   P +  S D+I   P +T  Q+E  L      
Sbjct: 334 GSSEILKIMGRKYTREQYLELVRKIKAAIPDVALSTDIIVGFPNETEEQFEETLSLYKEV 393

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +    +  +  +GT   +M    ++ +  +   +   N   +  S   +  YE
Sbjct: 394 GFETAYTFIYSPREGTPAARM--KDNIPMEVKKERLQRLNELVNAYSKAAMEKYE 446


>gi|323443943|gb|EGB01554.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus O46]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|166031846|ref|ZP_02234675.1| hypothetical protein DORFOR_01547 [Dorea formicigenerans ATCC
           27755]
 gi|166028299|gb|EDR47056.1| hypothetical protein DORFOR_01547 [Dorea formicigenerans ATCC
           27755]
          Length = 316

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 80/227 (35%), Gaps = 15/227 (6%)

Query: 28  CVKK----CPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  +    C  CDF +        +  +  ++  LT  +   +          +F   T 
Sbjct: 28  CPNRLNGACG-CDFCAEQGTGFEALNPQLSVREQLTLTREKIEKKYHAHKFIAYFQNYTN 86

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLG 136
           + +    I      + +  +    VEI+I   P  +  +  +   K          + LG
Sbjct: 87  TFLP---IDRFEKYMREGASFPDVVEISISTRPDCIRSDYLKILEKIRSEFQVEITLELG 143

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++   +LR + R H  +E I A+ + R+        +I  LP   +       +   +
Sbjct: 144 LQTVNYHTLRNIHRGHTLAEFIDAVWMIRDYHFDTCAHVILNLPGDDLIDAIESAKILSA 203

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             V  + L+ L I K T   + +++G + L S+   +          
Sbjct: 204 LQVSTVKLHSLYIAKNTRLCEAYENGTITLCSKEEYITRAITFLEYL 250


>gi|283470508|emb|CAQ49719.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus ST398]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|282916552|ref|ZP_06324310.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus D139]
 gi|283770356|ref|ZP_06343248.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
 gi|282319039|gb|EFB49391.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus D139]
 gi|283460503|gb|EFC07593.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|49483455|ref|YP_040679.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|253731911|ref|ZP_04866076.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257425346|ref|ZP_05601771.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257428007|ref|ZP_05604405.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430640|ref|ZP_05607022.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433400|ref|ZP_05609758.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257436242|ref|ZP_05612289.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus M876]
 gi|258423867|ref|ZP_05686752.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9635]
 gi|282903847|ref|ZP_06311735.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus C160]
 gi|282905610|ref|ZP_06313465.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282908586|ref|ZP_06316416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282910864|ref|ZP_06318667.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282914069|ref|ZP_06321856.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus M899]
 gi|282918991|ref|ZP_06326726.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus C427]
 gi|282924114|ref|ZP_06331790.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus C101]
 gi|283958035|ref|ZP_06375486.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|293501101|ref|ZP_06666952.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510063|ref|ZP_06668771.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus M809]
 gi|293526649|ref|ZP_06671334.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus M1015]
 gi|295427779|ref|ZP_06820411.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297591263|ref|ZP_06949901.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MN8]
 gi|81651243|sp|Q6GHE3|MIAB_STAAR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|49241584|emb|CAG40270.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|253724321|gb|EES93050.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257271803|gb|EEV03941.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257274848|gb|EEV06335.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278768|gb|EEV09387.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281493|gb|EEV11630.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257284524|gb|EEV14644.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus M876]
 gi|257845896|gb|EEV69925.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           A9635]
 gi|282314086|gb|EFB44478.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus C101]
 gi|282316801|gb|EFB47175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus C427]
 gi|282322137|gb|EFB52461.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325469|gb|EFB55778.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282327648|gb|EFB57931.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282330902|gb|EFB60416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282595465|gb|EFC00429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus C160]
 gi|283790184|gb|EFC29001.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|290920721|gb|EFD97784.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291096106|gb|EFE26367.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291467007|gb|EFF09525.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus M809]
 gi|295128137|gb|EFG57771.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297576149|gb|EFH94865.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MN8]
 gi|298694584|gb|ADI97806.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302332898|gb|ADL23091.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|312438327|gb|ADQ77398.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315194179|gb|EFU24572.1| hypothetical protein CGSSa00_05748 [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|323441074|gb|EGA98781.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus O11]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|321478289|gb|EFX89246.1| hypothetical protein DAPPUDRAFT_303123 [Daphnia pulex]
          Length = 547

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 130/373 (34%), Gaps = 62/373 (16%)

Query: 28  CVKK------CPYC------DF-----------NSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           C         C YC      DF            + +R  +     ++Q+    ++ ++Q
Sbjct: 99  CPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQT-RQRVEQLKQ 157

Query: 65  LTGPRSISSIFFGGGTPSLIEPQN----IALILDGIAKN-------------WTVSSNVE 107
           L            GGT   +        I  + D ++ +              +++  + 
Sbjct: 158 LGHSVDKVEFIVMGGTFMSLPEDYRDYFIRNLHDALSGHTSSDVNQAVEYSERSLTKCIG 217

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           ITIE  P      +     K G  R+ +GVQS+ E   R   R H       + HL ++ 
Sbjct: 218 ITIETRPDYCLKRHQSDMLKYGCTRLEIGVQSVYEDIARDTNRGHTVKAVCESFHLGKDS 277

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             ++   ++  LP   + +   +         +  D L +Y   + +GT  Y++ K G  
Sbjct: 278 GFKIVSHMMPDLPNIGLERDIDQFIEFFENPLFRADGLKIYPTLVIRGTGLYELWKTGRY 337

Query: 225 VLPSENVAVDLYNLTQSITSAH--GLHAYEISNHSFLGAES-------LHNLNYWRYGDY 275
                NV V   +L   I +        Y +     +   S       L  L   R  ++
Sbjct: 338 RSYHPNVLV---DLVAKILALVPPWTRIYRVQRDIPMPLVSSGVENGNLRELALARMVEF 394

Query: 276 IGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKE-FLSSEQQADEFLMMG 334
            GI        +VG   V   +  +    ++++R++  A    E FLS E    + L+  
Sbjct: 395 -GIDCRDVRTREVGIQEVHHKVRPYE---VELIRRDYVANGGWETFLSYEDPEKDILIGL 450

Query: 335 LRLREGISVKDWE 347
           LRLR+  S + + 
Sbjct: 451 LRLRK-CSPQAFR 462


>gi|116513226|ref|YP_812133.1| radical SAM superfamily protein [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116108880|gb|ABJ74020.1| Radical SAM superfamily enzyme [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 313

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 79/235 (33%), Gaps = 20/235 (8%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +      F  E+    +         ++F   T +    + +  
Sbjct: 43  CTFCTVSGSGDMILEPEAPIADQFAAEVTQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
             +       V   + I+I   P  +  +  +   +   NR     I LG+Q+  E++  
Sbjct: 103 RFEQAVNQPDV---IGISIGTRPDCLPDDVVEYLAEL--NRRMEVWIDLGLQTTYEETSD 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLY 205
            + R H+    + A+   R     +   LI  LP +T       ++R  L   +  + L+
Sbjct: 158 MINRAHDYETYVDAVRRLRVHGINVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLH 217

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L + K T   + + +G L L S+          Q I     L   EI  H   G
Sbjct: 218 LLHLMKQTRLQRDYHEGKLQLMSQE------EYVQVICDQLELIPKEIVIHRLTG 266


>gi|255521500|ref|ZP_05388737.1| hypothetical protein LmonocFSL_09810 [Listeria monocytogenes FSL
           J1-175]
          Length = 291

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 24  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 82

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 83  KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 142

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +H  +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 143 HDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 202

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 203 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 241


>gi|224499243|ref|ZP_03667592.1| hypothetical protein LmonF1_05932 [Listeria monocytogenes Finland
           1988]
          Length = 321

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFENVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|304439005|ref|ZP_07398925.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372494|gb|EFM26080.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 288

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 10/199 (5%)

Query: 32  CPY--CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFGGGTPSLIEPQN 88
           C Y  CDF S + +        ++    E   +++    R     +F   G    +    
Sbjct: 25  CSYNKCDFCS-MYKDDTFHLRDLEELKVE---VKEYLEERPFYKRVFIADGDALCLSNDK 80

Query: 89  IALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  + D  AKN   +          +         +  R+ G+  + +G +S  ++ L+ 
Sbjct: 81  LVDLCDFFAKNMENLERITSYATAKDILRKTDEELRELREHGIEMVYVGYESGSDEILKD 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLY 205
           + +N  A E I A   A+    ++S  +I  L      +       +       D++S  
Sbjct: 141 VNKNSTAEEYILATKKAKAAGIKVSATIIAGLGGMDKMELNAVETAKVVTEAKPDYISYL 200

Query: 206 QLTIEKGTLFYKMHKDGDL 224
            L +   T  Y+ +K G+ 
Sbjct: 201 TLDLFPDTPLYERYKSGEF 219


>gi|283853212|ref|ZP_06370464.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
 gi|283571385|gb|EFC19393.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
          Length = 306

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 54/140 (38%), Gaps = 5/140 (3%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQS 139
           +      +  ++D  A    V+    +++   P  ++         A  G  R+ LG+QS
Sbjct: 90  TYGPASRLQALVDEAAALPDVAG---LSLGTRPDCLDAEKIALLAGAPLGHVRLELGLQS 146

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + +L  + R H+A+    A   A      ++  L+  LP +++  +   +    +  V
Sbjct: 147 ANDATLARINRGHDAAAFARAATAAAGAGLWVTAHLMAGLPGESVADFLATVDFLNTLPV 206

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
             +  +   +  G+    ++
Sbjct: 207 RGVKFHNTLVVAGSGLAALY 226


>gi|303229106|ref|ZP_07315908.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302516230|gb|EFL58170.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 435

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 88/274 (32%), Gaps = 35/274 (12%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG------GGTPSLIEP 86
           YC F          +   +   + E + + +      + + I  G       G P+L   
Sbjct: 161 YCAFCIIPYTRGKLKSRKVDDIVNEAKRLVEHGFHEIVLTGIHLGNYGVELPGRPTL--A 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
             +  +L+    +     ++E         V     +     K     + L +Q+  +  
Sbjct: 219 DVVKALLEIPNLHRIRFGSIESV------EVSDELIELMATDKRVCPHLHLPLQAGSDHV 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R++   E    I   RN  P +S   D+I   P++T   ++  +         H+
Sbjct: 273 LTLMKRHYTLQEYKDLIKNLRNRIPDLSITTDIIAGFPQETDEDFDETMNTVKEIGFTHI 332

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA- 261
             +  +I +GT    M       +    VA+          S  GLHAY  S     G  
Sbjct: 333 HAFPYSIREGTPAATMPNQVPEAVKKARVALLND------LSEKGLHAYATSRIGKPGEI 386

Query: 262 --ESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHR 292
             E   N  Y     +YI      H RVK     
Sbjct: 387 LIEKEENGYYTGLTNEYI------HGRVKSDGQH 414


>gi|82750892|ref|YP_416633.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           aureus RF122]
 gi|123727480|sp|Q2YXS2|MIAB_STAAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|82656423|emb|CAI80843.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 514

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDL 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + D +     ++        ++P     +      + G  V  I L VQS   
Sbjct: 277 QDIEYD-LGDLLQAISKIAIPRVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQSGNN 335

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +  +   ++  P ++   D+I   P ++  Q+E  L        +
Sbjct: 336 AVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEVGFE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           H   Y  +   GT   KM  +  L +  E +      +     S   +  YE
Sbjct: 396 HAYTYLYSQRDGTPAAKMKDNVPLDVKKERLQRLNKKVGH--YSQIAMSKYE 445


>gi|53712274|ref|YP_098266.1| hypothetical protein BF0982 [Bacteroides fragilis YCH46]
 gi|52215139|dbj|BAD47732.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 311

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 7/193 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +      +  
Sbjct: 48  CTYCN-NQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTY---AELEG 103

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +        +   K     +  G+++  + +L+ +
Sbjct: 104 LKGKYEEALSVDGVVGLVIGTRPDCMPDPLLRYLEELNKHTFLLVEYGIETTRDVTLKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ +  ++            +I  LP +T  +   +        +  L ++QL 
Sbjct: 164 NRGHTYADTVETVNRTAACGILTGGHVILGLPGETHDEIIAQAAELSRLPLTTLKMHQLQ 223

Query: 209 IEKGTLFYKMHKD 221
           +  GT   +  + 
Sbjct: 224 LICGTKMAREFEC 236


>gi|229890694|sp|A9KMU9|MIAB_CLOPH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 456

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ ++QL     +  +  G        +L
Sbjct: 173 CNNFCSYC-----IVPYVRGRERS-RNPEDIIKEIKQLVSKGVVEVMLLGQNVNSYGKTL 226

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  + +   +       +  +P  +  +  +  + +    N I L VQS  
Sbjct: 227 DEPVSFAQLLQMVEQVEGLKRIRF--MTPHPKDLSNDVIEVMKNSKKICNHIHLPVQSGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +  +   +   P +S   D+I   P +T   +   L        
Sbjct: 285 TELLMKMNRKYTKEDYLNLVDRIKMAMPNISLTTDIIVGFPGETEEDFLDTLDVVRKVGY 344

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 345 DSAYTFIYSKRSGTPAATM 363


>gi|325846595|ref|ZP_08169510.1| radical SAM protein, TIGR01212 family [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481353|gb|EGC84394.1| radical SAM protein, TIGR01212 family [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 318

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 80/207 (38%), Gaps = 16/207 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFGGGTPSLIEPQN 88
           C +C   S          +++ +   +++  +   G R        +F   + + +E   
Sbjct: 45  CIFC---SESGGSFENLPSYM-TVDKQLETNKNYIGNRYKAKKFIAYFQNFSNTYMEYDK 100

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQ 143
              +++   K +       I+I      +     +  ++          I LG+Q+   +
Sbjct: 101 FVEVIEACDKEY----ISAISISTRSDCMTYRKLEFLKEFSKKTGKDIIIELGLQTANYK 156

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ L R  + ++ I A ++      R+   +I +LP           +   +  V  + 
Sbjct: 157 TLKILNRCEDLADFIRACNMINEYGFRICTHVILSLPWDDDQDIVETARIINTLKVKEVK 216

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           ++ L I K T   KM+K+ ++V+PS+ 
Sbjct: 217 IHSLYIIKNTKLEKMYKNNEIVMPSKE 243


>gi|325294349|ref|YP_004280863.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325064797|gb|ADY72804.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 375

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C K C YC     N +V+RY + ++  ++        +  L   + I S+    G   + 
Sbjct: 49  CQKNCYYCGLRKDNKNVKRYTLTEDEVVE--------LALLIYKKGIKSLALQSGE--ME 98

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANP---------SSVEVNNFQGYRKAGVNRISL 135
                  +L  I K    +  ++I     P           +E  +++   KAGV+R  L
Sbjct: 99  NEAFFEKLLRIIRKIKEKTKKIDIQNGEEPKGAGITGSFGELEREHYEELFKAGVHRYLL 158

Query: 136 GVQSLEEQSLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
            +++ + +    L  + H+  + +  +   + I  ++   +I  +P QT      +L   
Sbjct: 159 RIETSKRELYEKLHPSDHSFEKRLKCLKWLKEIGYQVGTGVIIGIPGQTYEDLVNDLLFF 218

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
             + +D + +      + T  +  +
Sbjct: 219 KDFDIDMIGMGPYIEHRDTPIFCWY 243


>gi|320107071|ref|YP_004182661.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Terriglobus saanensis SP1PR4]
 gi|319925592|gb|ADV82667.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Terriglobus saanensis SP1PR4]
          Length = 492

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 69/213 (32%), Gaps = 10/213 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          ++        EM+  ++L     +   FF   T ++    
Sbjct: 208 CPAQCTFCLWP-QTLSGHAWRKRSTDDVAAEMKHAKELWPN--VKEFFFDDDTFNI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A  ++   K   +          +  + + +  +  + AG   + +G +S + Q L+ 
Sbjct: 261 QKARTIELCEKLKPLGLTW---SSTSRVTTDRDTLKAMKDAGCRLLIVGFESGDPQILKN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +    ++   +  D I  LP +T       +  A +   + + +   
Sbjct: 318 IKKGATVERARDFVKDCHDLGLIIHADFILGLPGETKESIRNTIDFAKTLDCETIQVSIA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               GT FY   K    +          + +  
Sbjct: 378 HAYPGTEFYDYAKKNGFITNENMEDGTGHQMAH 410


>gi|303232181|ref|ZP_07318884.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513287|gb|EFL55326.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 431

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 88/274 (32%), Gaps = 35/274 (12%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG------GGTPSLIEP 86
           YC F          +   +   + E + + +      + + I  G       G P+L   
Sbjct: 157 YCAFCIIPYTRGKLKSRKVDDIVNEAKRLVEHGFHEIVLTGIHLGNYGVELPGRPTL--A 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
             +  +L+    +     ++E         V     +     K     + L +Q+  +  
Sbjct: 215 DVVKALLEIPNLHRIRFGSIESV------EVSDELIELMATDKRVCPHLHLPLQAGSDHV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R++   E    I   RN  P +S   D+I   P++T   ++  +         H+
Sbjct: 269 LTLMKRHYTLQEYKDLIKNLRNRIPDLSITTDIIAGFPQETDEDFDETMNTVKEIGFTHI 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA- 261
             +  +I +GT    M       +    VA+          S  GLHAY  S     G  
Sbjct: 329 HAFPYSIREGTPAATMPNQVPEAVKKARVALLND------LSEKGLHAYATSRIGKPGEI 382

Query: 262 --ESLHNLNYWRYG-DYIGIGPGAHSRVKVGSHR 292
             E   N  Y     +YI      H RVK     
Sbjct: 383 LIEKEENGYYTGLTNEYI------HGRVKSDGQH 410


>gi|242399457|ref|YP_002994882.1| Fe-S oxidoreductase family protein [Thermococcus sibiricus MM 739]
 gi|242265851|gb|ACS90533.1| Fe-S oxidoreductase family protein [Thermococcus sibiricus MM 739]
          Length = 424

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 74/234 (31%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-LIEP 86
           C   C YC    +V+ +++            +++ +++   R I+   F  G+P  ++  
Sbjct: 174 CPFGCYYC-QTPYVKGFRMRHRP----IDQIVKYSKRMKDMRYITPNAFAYGSPGGILNL 228

Query: 87  QNIALILDGIAKNWTVSSNVE---ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
             +  +L  +         +       E  P  ++    +   K   NR +++G QS ++
Sbjct: 229 NKLEALLKALQPIRKEGRRLFYGTFPSEVRPEFIKPETLELLLKYADNRRLAIGAQSGDD 288

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVD 200
           +  + + R H       A+            D I  LP +T       ++    +     
Sbjct: 289 EMFKAMHRMHTTENVRQAVEYMLEYDIEPVVDFIVGLPNETKESQRKSIEFMKWIIKKGG 348

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  +      GT + +        L  E          +           E+S
Sbjct: 349 KVRAHYFMPLPGTPWAR---CKPSPLSEEMKKFLGRMAAKGYIEGSWGVQIELS 399


>gi|319892314|ref|YP_004149189.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162010|gb|ADV05553.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464588|gb|ADX76741.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
           pseudintermedius ED99]
          Length = 516

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     ++ +R L           G    +   + 
Sbjct: 225 CDKFCTYC-----IVPFTRGKERS-RRPEDIIEEVRDLARQGYQEITLLGQNVNAYGKDI 278

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +++   + D +A    +         ++P        +   + G  V  I L VQS  +Q
Sbjct: 279 EDLEYGLGDLLADISKIDIPRVRFTTSHPWDFTDRMIEVIAEGGNIVPHIHLPVQSGNDQ 338

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  +   +   P ++   D+I   P +T  Q+E  L    +   +H
Sbjct: 339 VLKIMGRKYTRESYLDLVARIKAAMPDVALTTDIIVGYPNETEAQFEETLSLYEAVGFEH 398

Query: 202 LSLYQLTIEKGTLFYKM 218
              Y  +   GT   KM
Sbjct: 399 AYTYLYSQRDGTPAAKM 415


>gi|16800838|ref|NP_471106.1| hypothetical protein lin1770 [Listeria innocua Clip11262]
 gi|16414257|emb|CAC97001.1| lin1770 [Listeria innocua Clip11262]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|312110172|ref|YP_003988488.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
 gi|311215273|gb|ADP73877.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
          Length = 451

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 84/255 (32%), Gaps = 14/255 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + Q +        + +    GG  + ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEIIRQAQQLVNAGYKEIVLTGIHTGGYGTDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L D   +   +      +IEA+   +        R++   V  + + +QS     
Sbjct: 210 NFAALLRDLDEQVVGLKRLRISSIEAS--QITDEVIDVLRRSDKIVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTTEFFAERLARLREVFPELAITSDVIVGFPGETEEEFMETYNFVREQRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA---VDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++  +   GT   +M    D  +  + V         L +   S       E+      
Sbjct: 328 HVFPYSKRTGTPAARMPNQVDEDVKHDRVRRLIALSDQLAKEYASQFEGQVLEVIPEER- 386

Query: 260 GAESLHNLNYWRYGD 274
             E+L +  Y  Y D
Sbjct: 387 DKENLESGLYIGYTD 401


>gi|294891351|ref|XP_002773536.1| hypothetical protein Pmar_PMAR029516 [Perkinsus marinus ATCC 50983]
 gi|239878708|gb|EER05352.1| hypothetical protein Pmar_PMAR029516 [Perkinsus marinus ATCC 50983]
          Length = 791

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 9/147 (6%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE------VNNFQGYRKAGVNRISL 135
           S +E  ++  +        ++         ++   ++       N  +    + ++R+ +
Sbjct: 266 SSLEAHSMPALNSLYRGKLSLEEEQVRNEVSDCKIIDSSGLHKPNRAEKAEDSRMHRVQI 325

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           GVQ  + Q L+ + R H   ++I A+ L +    ++   L+  LP     +     Q  L
Sbjct: 326 GVQHTDNQILKTINRGHTVEDSIKAVKLLKESCFKVDIHLMPDLPTSDPEKDREMFQFVL 385

Query: 196 S---YAVDHLSLYQLTIEKGTLFYKMH 219
                  DH  +Y   +   +   K +
Sbjct: 386 ETPHLQADHWKIYPCEVTPFSTIEKWY 412


>gi|160880731|ref|YP_001559699.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium
           phytofermentans ISDg]
 gi|160429397|gb|ABX42960.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium
           phytofermentans ISDg]
          Length = 487

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ ++QL     +  +  G        +L
Sbjct: 204 CNNFCSYC-----IVPYVRGRERS-RNPEDIIKEIKQLVSKGVVEVMLLGQNVNSYGKTL 257

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  + +   +       +  +P  +  +  +  + +    N I L VQS  
Sbjct: 258 DEPVSFAQLLQMVEQVEGLKRIRF--MTPHPKDLSNDVIEVMKNSKKICNHIHLPVQSGS 315

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +  +   +   P +S   D+I   P +T   +   L        
Sbjct: 316 TELLMKMNRKYTKEDYLNLVDRIKMAMPNISLTTDIIVGFPGETEEDFLDTLDVVRKVGY 375

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 376 DSAYTFIYSKRSGTPAATM 394


>gi|313623477|gb|EFR93679.1| radical SAM protein, family [Listeria innocua FSL J1-023]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|237730638|ref|ZP_04561119.1| MiaB protein [Citrobacter sp. 30_2]
 gi|226906177|gb|EEH92095.1| MiaB protein [Citrobacter sp. 30_2]
          Length = 490

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 76/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 173 CNKYCTYC---VVPYTRGEEVSRPADDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 228

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            ++    ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 229 GTIGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIVEVYRDTPELVSFLHLPVQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 284 SGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQTMKLIAD 343

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 344 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 390


>gi|117619554|ref|YP_857732.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|229890492|sp|A0KN81|MIAB_AERHH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|117560961|gb|ABK37909.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 477

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 12/202 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLIEPQ 87
           C  YC F              +   L E+  + Q  G R ++ +         P+     
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVLYEIAQLAQQ-GVREVNLLGQNVNAYRGPTF--DG 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I    + +     +     I     +P     +  + Y+     V+ + L VQS  ++ 
Sbjct: 214 GICTFAELLRLVAAIDGIDRIRYTTSHPIEFTDDIIEVYKDTPEVVSFLHLPVQSGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E  + I   R   P ++   D I   P +T   +E  ++       D  
Sbjct: 274 LTMMKRPHTVLEYKSKIRRLRAARPDITISSDFIVGFPNETDEDFEATMKLIEEINFDMS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
             +  +   GT    +  D D+
Sbjct: 334 FSFIYSPRPGTPAADLPDDVDM 355


>gi|289449396|ref|YP_003475195.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289183943|gb|ADC90368.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 485

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  +  G+E   Q     ++ +++L        +  G    S    L
Sbjct: 183 CNNYCTYC-----IVPFTRGRERSRQP-EEILRELQELAASGYTEVMLLGQNVNSYGRDL 236

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
            +  + A +L   A++  +       + ++P  +                 I L +QS  
Sbjct: 237 ADKMSFAELLALAAEHSGLPRIRY--MTSHPKDLSPELIDVMAAYPNIERHIHLPLQSGS 294

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR + R++N +  ++ + LA+   P +S   D+I   P +T   +   L+       
Sbjct: 295 DAVLRKMNRHYNIARYMSIVDLAKRKIPDLSITTDIIVGFPGETEADFAETLRIVGEVGY 354

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +Q +   GT   K 
Sbjct: 355 DSAFTFQYSPRPGTPAAKW 373


>gi|94268697|ref|ZP_01291260.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93451502|gb|EAT02329.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 589

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 76/252 (30%), Gaps = 31/252 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R  V      Q      Q +    GPR +  +     +P    P 
Sbjct: 183 CPFACSYC---LSAARPGVKLLPPAQVKAELSQLLAH--GPRLVRFVDRTFNSP----PD 233

Query: 88  ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS--LGVQSLEE 142
               +   L           +     E  P                 R    +G+QS  +
Sbjct: 234 RALELWRWLAAQ------PGDTRFHFEIAPELFTTEQLDFLATVPAGRFQFEIGLQSFNQ 287

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R  +   A+A I   +      +  DLI  LP  T   +   L + L+    H
Sbjct: 288 EALAAVNRRPDLGRAVANIQRLQAAGNIHLHLDLILGLPFDTRASYHHSLNQILALRPHH 347

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           L L  L +   T      ++  L    +            + +   L    ++    LG 
Sbjct: 348 LQLGLLKVLPDTPLAARREEFGLCHCRQPP--------YQVLANRWLDQPALAALYRLGE 399

Query: 262 --ESLHNLNYWR 271
             E+ +N  ++R
Sbjct: 400 VIEAFYNPRFFR 411


>gi|326204360|ref|ZP_08194218.1| hypothetical protein Cpap_0841 [Clostridium papyrosolvens DSM 2782]
 gi|325985392|gb|EGD46230.1| hypothetical protein Cpap_0841 [Clostridium papyrosolvens DSM 2782]
          Length = 314

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 74/235 (31%), Gaps = 32/235 (13%)

Query: 32  CPYCD----------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C +C               V +       +I                  I   +F   + 
Sbjct: 41  CIFCGEEGAGFENLSCTMSVSQQLAQNARYIG-----------KNYGSDIFIAYFQNYSN 89

Query: 82  SLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNR-ISL 135
           + +  +     I++   +       V I I   P  +     +      ++ GV+  I L
Sbjct: 90  TYLPFEEFRKNIIEACQE-----GIVAIYISTRPDCINDRYMEFLADIKKEKGVDIVIEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++   SL+ L R H  +E I A+   +     +    I  LP  ++       +   
Sbjct: 145 GLQTVNYHSLKILQRGHTLAEFIDAVIRIKKYDLEVCAHYITDLPTDSIEDVIEGAKILS 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  V  +  + L I K T+  KM+  G +V  S    +D             +  
Sbjct: 205 ALGVQQVKCHSLYILKDTVLEKMYSQGKIVPVSMEEFIDRTIAFLEYLKPQIVVQ 259


>gi|255027474|ref|ZP_05299460.1| hypothetical protein LmonocytFSL_16003 [Listeria monocytogenes FSL
           J2-003]
 gi|284802053|ref|YP_003413918.1| hypothetical protein LM5578_1808 [Listeria monocytogenes 08-5578]
 gi|284995195|ref|YP_003416963.1| hypothetical protein LM5923_1760 [Listeria monocytogenes 08-5923]
 gi|315282618|ref|ZP_07870988.1| radical SAM protein, family [Listeria marthii FSL S4-120]
 gi|284057615|gb|ADB68556.1| hypothetical protein LM5578_1808 [Listeria monocytogenes 08-5578]
 gi|284060662|gb|ADB71601.1| hypothetical protein LM5923_1760 [Listeria monocytogenes 08-5923]
 gi|313613729|gb|EFR87503.1| radical SAM protein, family [Listeria marthii FSL S4-120]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|125625316|ref|YP_001033799.1| hypothetical protein llmg_2563 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124494124|emb|CAL99125.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300072130|gb|ADJ61530.1| hypothetical protein LLNZ_13250 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 313

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 79/235 (33%), Gaps = 20/235 (8%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +      F  E+    +         ++F   T +    + +  
Sbjct: 43  CTFCTVSGSGDMILEPEAPIADQFAAEVTQFHKKWPGVKKYIVYFQNFTNTHAPVEVLRE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
             +       V   + I+I   P  +  +  +   +   NR     I LG+Q+  E++  
Sbjct: 103 RFEQAVNQPDV---IGISIGTRPDCLPDDVVEYLAEL--NRRMEVWIDLGLQTTYEKTSD 157

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLY 205
            + R H+    + A+   R     +   LI  LP +T       ++R  L   +  + L+
Sbjct: 158 MINRAHDYETYVDAVRRLRVHGINVCTHLINGLPGETTEMMLENVRRMVLDSDIQGVKLH 217

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L + K T   + + +G L L S+          Q I     L   EI  H   G
Sbjct: 218 LLHLMKQTRLQRDYHEGKLQLMSQE------EYVQVICDQLELIPKEIVIHRLTG 266


>gi|313632955|gb|EFR99885.1| radical SAM protein, family [Listeria seeligeri FSL N1-067]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVKKLQAHNIRICTHIINGLPKETPEMMMETTQKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|209966243|ref|YP_002299158.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodospirillum
           centenum SW]
 gi|229890626|sp|B6IVM2|MIAB_RHOCS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|209959709|gb|ACJ00346.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodospirillum centenum
           SW]
          Length = 466

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 16/224 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R         +      + +       ++   ++    G      
Sbjct: 162 CDKFCTYC--VVPYTRGAEFSRPAARVLAEAARLVADGVAEITLLGQNVNAYHGDG---P 216

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 +   +     +     I     +P+ ++      + +    +  + L VQS  +
Sbjct: 217 DGTTWGLGRLVRNLAEIDGLARIRYTTSHPNDMDAELIAAHAEVPQLMPFVHLPVQSGND 276

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R H A +    +    A      +S D I   P +T  ++   L+        
Sbjct: 277 RILQAMNRKHTADDYRRVVERMRAARPDLALSSDFIVGFPGETDQEFADTLRLVTEIGYA 336

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               ++ +   GT    M    D     E+V  +     Q + +
Sbjct: 337 QAYSFKYSARPGTPAAAM----DGRQVPESVKAERLEALQQLLT 376


>gi|289434948|ref|YP_003464820.1| radical SAM domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171192|emb|CBH27734.1| radical SAM domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|313637569|gb|EFS02979.1| radical SAM protein, family [Listeria seeligeri FSL S4-171]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVKKLQAHNIRICTHIINGLPKETPEMMMETTQKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|322421522|ref|YP_004200745.1| cobalamin B12-binding domain-containing protein [Geobacter sp. M18]
 gi|320127909|gb|ADW15469.1| cobalamin B12-binding domain protein [Geobacter sp. M18]
          Length = 492

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R ++     +       ++++++  G   I  I F     +     
Sbjct: 214 CPYACSYCDRSVFRRSFRYNSAQY---LYEHLRYLKERFG---IRHINFYDDQFTF---- 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +  A        +          ++       + AG   +SLG+++ +E+ L  
Sbjct: 264 NRERVEEFTALMTDRPLGMTFNCAVRAEHIDPELLVRMKGAGCWMMSLGIETGDEELLAR 323

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +N +       I + +    R    L+  LP ++       +    S  +D  +L + 
Sbjct: 324 HRQNADLDHLAQRIRMIKEAGIRTKGLLMIGLPGESEASIRRSMDYVFSLPIDDFNLAKF 383

Query: 208 TIEKGTLFY-KMHKDGDLVLPSENVAVDLYN-----LTQSITSAHGLHAYEI 253
           T   G+  Y  +H+ G+     E +    +      +T+          Y  
Sbjct: 384 TPFPGSPVYDNIHELGEFDEDWEKMDCMNFLFVTKGMTRERLEELFQEFYRN 435


>gi|73662777|ref|YP_301558.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|123775346|sp|Q49X85|MIAB_STAS1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|72495292|dbj|BAE18613.1| putative 2-methylthioadenine synthetase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 513

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 30/239 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQE--NFIQSFLTE----MQWMRQLTG--PRSISSIFFG 77
           C K C YC   F     R +  ++  + ++    +    +  + Q      + I  + +G
Sbjct: 222 CDKFCTYCIVPFTRGKERSRRPEDIIDEVRDLARQGYKEITLLGQNVNAYGKDIDGLAYG 281

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
            G         +  I          ++       ++P        +     G  V  + L
Sbjct: 282 LG-------DLLEDISKIDIPRVRFTT-------SHPWDFTDRMIEVIANGGNIVPHVHL 327

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS     L+ +GR +     +  ++  +   P ++   D+I   P +T  Q+E  L  
Sbjct: 328 PVQSGNNAVLKIMGRKYTRESYLDLVNRIKTHIPNVALTTDIIVGYPNETDEQFEETLTL 387

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                 +H   Y  +   GT   KM+ +  L +  + +      +     S   +  YE
Sbjct: 388 YDEVEFEHAYTYIYSQRDGTPAAKMNDNVPLDVKKDRLQQLNKKVA--CYSERAMQQYE 444


>gi|295399226|ref|ZP_06809208.1| RNA modification enzyme, MiaB family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978692|gb|EFG54288.1| RNA modification enzyme, MiaB family [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 451

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 84/255 (32%), Gaps = 14/255 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + Q +        + +    GG  + ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEIIRQAQQLVNAGYKEIVLTGIHTGGYGTDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L D   +   +      +IEA+   +        R++   V  + + +QS     
Sbjct: 210 NFAALLRDLDEQVVGLKRLRISSIEAS--QITDEVIDVLRRSDKIVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTTEFFAERLARLREVFPELAITSDVIVGFPGETEEEFMETYNFVREQRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA---VDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++  +   GT   +M    D  +  + V         L +   S       E+      
Sbjct: 328 HVFPYSKRTGTPAARMPNQVDEEVKHDRVRRLIALSDQLAKEYASQFEGQVLEVIPEER- 386

Query: 260 GAESLHNLNYWRYGD 274
             E+L +  Y  Y D
Sbjct: 387 DKENLESGLYIGYTD 401


>gi|149183373|ref|ZP_01861809.1| YmcB [Bacillus sp. SG-1]
 gi|148848916|gb|EDL63130.1| YmcB [Bacillus sp. SG-1]
          Length = 521

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 81/235 (34%), Gaps = 21/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C K C YC     +  Y  G+E   +     +Q +R L           G    +     
Sbjct: 222 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRHLAAQGYQEVTLLGQNVNAYGKDI 275

Query: 84  --IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +E   +  ++D + K   +         ++P   + +  +   K G  V  I L VQS
Sbjct: 276 EDLENYGLGDLMDELRK---IDIPRIRFTTSHPRDFDDHLIEVLAKKGNLVEHIHLPVQS 332

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R +     +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 333 GSSAVLKIMARKYTRERFLELVGKIKAAMPGVALTTDIIVGYPNETEEQFEETLSLYREV 392

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +    Y  +  +GT   KM+ +  +    +   +   N   +  S   L  YE
Sbjct: 393 GFESAFTYIYSPREGTPAAKMNDNVPME--VKKERLQRLNQLVNEYSGEALKQYE 445


>gi|212639354|ref|YP_002315874.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anoxybacillus
           flavithermus WK1]
 gi|229890441|sp|B7GJM6|MIAB_ANOFW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|212560834|gb|ACJ33889.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
          Length = 527

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R L   G + I+    ++   G   
Sbjct: 239 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDF 292

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + ++   +  ++D + K   +         ++P   +    +   K G  V  I L VQS
Sbjct: 293 TDMK-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDRLIEVLAKGGNLVEHIHLPVQS 348

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R +   + +  +   +   P ++   D+I   P +T  Q+E  L      
Sbjct: 349 GSSEVLKMMARKYTREQYLELVRKIKEAIPGVALTTDIIVGFPNETDEQFEETLSLYREV 408

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 409 EFDSAFTFIYSPREGTPAAKMVDNVPME--VKKERLQRLNALVNEISAKKMKEYE 461


>gi|251797360|ref|YP_003012091.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
           sp. JDR-2]
 gi|247544986|gb|ACT02005.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. JDR-2]
          Length = 525

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 69/219 (31%), Gaps = 12/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R K              +  RQ     ++   ++   G     I 
Sbjct: 236 CDKFCTYC--IVPYTRGKERSRRPEDVIAEVRELARQGFKEITLLGQNVNAYGKDFEDIS 293

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                   D +     +         ++P   + +  +   + G  V  I L +QS   +
Sbjct: 294 ----YRFGDLMHDISKIDIPRIRFTTSHPRDFDDHLIEVLAQGGNLVEHIHLPIQSGSTE 349

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++  +        +   P +S   D+I   P +T  Q+E  +        D 
Sbjct: 350 VLKRMSRKYSREQIFELAAKIKRAIPNVSLSTDIIVGFPGETDEQFEDTMTLVRQIGFDF 409

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +  +  +GT    M  +  + L  + +      + +
Sbjct: 410 AYTFIYSPREGTPAAGMEDNVPMELKKKRLKRLNELMAE 448


>gi|116873096|ref|YP_849877.1| hypothetical protein lwe1680 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741974|emb|CAK21098.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETAQKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|46907892|ref|YP_014281.1| hypothetical protein LMOf2365_1685 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47093773|ref|ZP_00231522.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 4b H7858]
 gi|226224264|ref|YP_002758371.1| hypothetical protein Lm4b_01674 [Listeria monocytogenes Clip81459]
 gi|254824275|ref|ZP_05229276.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852288|ref|ZP_05241636.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254931604|ref|ZP_05264963.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300766054|ref|ZP_07076023.1| hypothetical protein LMHG_12484 [Listeria monocytogenes FSL N1-017]
 gi|46881161|gb|AAT04458.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47017860|gb|EAL08644.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 4b H7858]
 gi|225876726|emb|CAS05435.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258605594|gb|EEW18202.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293583157|gb|EFF95189.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293593510|gb|EFG01271.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513256|gb|EFK40334.1| hypothetical protein LMHG_12484 [Listeria monocytogenes FSL N1-017]
 gi|328465027|gb|EGF36306.1| hypothetical protein LM1816_09702 [Listeria monocytogenes 1816]
 gi|332312103|gb|EGJ25198.1| Putative protein ytqA [Listeria monocytogenes str. Scott A]
          Length = 321

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +H  +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|322418157|ref|YP_004197380.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124544|gb|ADW12104.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 504

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 94/262 (35%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C++KC +C     +   +  +    ++F+ E++ +R   G   +         P+  + +
Sbjct: 205 CMEKCSFCS--QQLFWERSWRARSPENFVAELELLRDSYG---VEVAMLSDEIPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +  + YR+AGV  I +GV++ ++++L
Sbjct: 259 RWVRILDLMIERKV---GVKLLMETRVDDILRDADVMEKYREAGVEHIYVGVEAGDQETL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +N    ++ AAI +  N         +  +P  T       ++ A  Y  D     
Sbjct: 316 DLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIAKTIELAKHYNPDMAFFL 375

Query: 206 QLTIEKGTLFY---------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y         K ++  +LV P            +                
Sbjct: 376 AIAPWPYAELYPELEQYVATKDYRKYNLVEPVIKPKQMTLEELERELGKASQK------F 429

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
                ++LH L+ W+    + +
Sbjct: 430 FMHKFQNLHGLSPWKQEFMLAV 451


>gi|262374162|ref|ZP_06067439.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter junii
           SH205]
 gi|262311173|gb|EEY92260.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter junii
           SH205]
          Length = 483

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 68/203 (33%), Gaps = 24/203 (11%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q YR     V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYRDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R + P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLQAMKRNHTIDVYIDKIAKLRKVRPDMHLSSDFIIGFPGETDEHFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              DH   +  +   GT   ++ 
Sbjct: 363 LDFDHSYSFVYSKRPGTPASELP 385


>gi|305666326|ref|YP_003862613.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maribacter sp. HTCC2170]
 gi|88708318|gb|EAR00555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maribacter sp. HTCC2170]
          Length = 481

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 4/143 (2%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + ++  +   K     N I L VQS   + L+ + R H   E    I   R I P
Sbjct: 273 SNPQDMSLDVIKTMAKHDNICNHIHLPVQSGSNRILKAMNRLHTIEEYFELIDNIRKIIP 332

Query: 170 RM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            +  S D+I   P +T    +  L        D+  +Y  +   GT+  +   D      
Sbjct: 333 EIALSHDMISGFPTETEEDHQDTLAVLDRVKYDYGYMYSYSERPGTMAARKMDDDIPEKT 392

Query: 228 SENVAVDLYNLTQSITSAHGLHA 250
            +    ++  L +          
Sbjct: 393 KQRRLSEIIALQREHCQFRTEKH 415


>gi|320100458|ref|YP_004176050.1| Radical SAM domain-containing protein [Desulfurococcus mucosus DSM
           2162]
 gi|319752810|gb|ADV64568.1| Radical SAM domain protein [Desulfurococcus mucosus DSM 2162]
          Length = 435

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 26/206 (12%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C   C YC        F  H  R       +++           +   R I+      G 
Sbjct: 182 CPYGCSYCQVSYMHGAFYRH--RSIGRIVYYVRELAR-----LGVRDYRFITPDSLSYGL 234

Query: 81  PSL-------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
            ++       +  + ++ + +                E  P  V     +  R+   NR 
Sbjct: 235 STVRREPDVGLIDELLSSLHEVARDVGGRIFYGSFPSEVRPEHVTGEAVRVLRRYVSNRE 294

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL- 191
           I +G QS  ++ L  + R H+  + + A+ +        S D+I  +P +T    E  L 
Sbjct: 295 IIVGAQSGSDRVLSMVRRGHSVDDVLNAVRVISENGFTPSVDVILGIPGETREDQEETLR 354

Query: 192 --QRALSYAVDHLSLYQLTIEKGTLF 215
             +R L      + ++      GT  
Sbjct: 355 LIERILGMG-GRIHVHYYLPLPGTPL 379


>gi|325104504|ref|YP_004274158.1| hypothetical protein Pedsa_1780 [Pedobacter saltans DSM 12145]
 gi|324973352|gb|ADY52336.1| conserved hypothetical protein [Pedobacter saltans DSM 12145]
          Length = 316

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 7/204 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ +S     +   E+  +     M+   +         I+F   T +      +  
Sbjct: 51  CTYCNVDSFTPASRT-MESMKEQIEFGMERAMKNYKAEKFI-IYFQPNTNTYAPAHYLKT 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQSLRFL 148
           + D  A N   +  V +++   P  ++              V  + +G++S+  ++L  +
Sbjct: 109 LYDE-ALNVNPADVVGLSVGTRPDCLDFEKIALLESYTDRLVVDLEMGMESIYNETLSQI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQL 207
            R  +  E I+ + +  N    +    I+ LP +T             +  +  +  + L
Sbjct: 168 NRGCSHDEFISTMDMLENSKLDICVHTIFGLPGETKDMMLRYADEINRFKQIKFVKFHHL 227

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            I +G++    +K     L S   
Sbjct: 228 HIVEGSIMGVKYKKDPFKLFSLEE 251


>gi|115374421|ref|ZP_01461704.1| Fe-S oxidoreductase family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368623|gb|EAU67575.1| Fe-S oxidoreductase family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 404

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 29/207 (14%)

Query: 28  CVKKCPYC--DF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+  C +C   F N    R++  +       + E   + + +G R I  I     TP+ +
Sbjct: 159 CIYACRFCQTPFLNKARFRHRSVRN------VAEWARVLRASGRRDIRFI-----TPTSL 207

Query: 85  E---------PQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAGVN- 131
                      + +  +L  + +       +       E  P  V        ++   N 
Sbjct: 208 SYGSGDEAVNLEAVEALLAALREAMAPEGRIFFGTFPSEVRPEHVTPEALALLKRYVAND 267

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G QS  E+ LR   R H+    + ++ +A       + D I  LP +     E  +
Sbjct: 268 NLIIGGQSGSERILRSSHRGHDTEAVVRSVRVALEGGFLPNVDFILGLPGEGPEDIEATV 327

Query: 192 QRALSYAVDHLSLYQLTIE--KGTLFY 216
           +   + A     ++  T     GT F 
Sbjct: 328 RMMETLAGLGARVHGHTFMPLPGTPFR 354


>gi|218290137|ref|ZP_03494299.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239846|gb|EED07035.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 497

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 17/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSL 83
           C K C YC     V   +  + + +        ++ +++     ++   ++   G     
Sbjct: 210 CNKFCTYC----IVPYTRGVERSRLPEDVLREVVELVQEGYQDITLLGQNVNDYGVD--- 262

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +   N A +L  +     +      T  +NP +          ++   V  I L VQS  
Sbjct: 263 LGTTNFARLLRQVNSIPGIGWIRFTT--SNPWNFTDELIDAIAESENVVEHIHLPVQSGN 320

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + LR + R+H     +  +   R   P +S   DLI   P +T   ++  L+       
Sbjct: 321 NEILRRMNRSHTREYYLRLVDKIRTRIPGVSITTDLIVGFPGETEAHFQDTLRLVREVEF 380

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D+   +  +  + T   + + D  L
Sbjct: 381 DNAFTFIYSPRENTPAARWNDDTPL 405


>gi|320102495|ref|YP_004178086.1| 30S ribosomal protein S12P methylthiotransferase [Isosphaera
           pallida ATCC 43644]
 gi|319749777|gb|ADV61537.1| SSU ribosomal protein S12P methylthiotransferase [Isosphaera
           pallida ATCC 43644]
          Length = 489

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPS 82
           C + C +C        HV +         +  + + ++ +  +    +   +   G    
Sbjct: 166 CDRLCTFCAIPMMRGKHVTKPIEEVLREAEELVRDGVRELVLVAQDMTYYGMDLYG---- 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLGVQ 138
                 +A +L  + +   +       +   P       +      G  RI     + +Q
Sbjct: 222 ---EPRLAELLQRLDQLDGLDWIR--ILYCYPRHFTDELYATLA--GATRIVPYLDMPLQ 274

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALS 196
            + ++ LR + R H   E I  I   R   PR+      I   P +T  Q+    +  + 
Sbjct: 275 HINDRMLRAMNRRHTKQETIGIIQRLRAEIPRLVLRTTFIVGFPGETEEQFAELEEFVVQ 334

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              + L ++  + E  T   ++    D
Sbjct: 335 TRFERLGVFPYSYEPDTPAARLKGHLD 361


>gi|86609143|ref|YP_477905.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|123502140|sp|Q2JKY0|MIAB_SYNJB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|86557685|gb|ABD02642.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 444

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C ++C YC      R     Q    Q+   E++ + +  G R ++ +          L  
Sbjct: 155 CNERCTYC---IVPRVRGQEQSRQPQAIRAEIEDVAR-AGYREVTLLGQNIDAYGRDLDP 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             N+A +L  +     +      T  ++P            +         +  Q+   +
Sbjct: 211 KTNLASLLRFVHSVEGIERIRFAT--SHPRYFTEELITTCAELPKVCEHFHIPFQAGSNE 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +        I L R   P   +S D I   P +T  Q++  LQ       D 
Sbjct: 269 VLKRMRRGYTHERYRQIIQLIRQYMPEAAISADAIVGFPGETEAQFQETLQLVQDIGFDQ 328

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
           ++    +   GT   +    
Sbjct: 329 VNTAAYSPRPGTPAAEWPDQ 348


>gi|226312967|ref|YP_002772861.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brevibacillus
           brevis NBRC 100599]
 gi|226095915|dbj|BAH44357.1| probable tRNA methylthiotransferase [Brevibacillus brevis NBRC
           100599]
          Length = 503

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 21/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E   +     +  +R L        +  G    +    +
Sbjct: 217 CDKFCTYC-----IVPYTRGKERS-RRPEDVIAEVRDLARQGFKEIMLLGQNVNAY--GK 268

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +   I  G          ++I       ++P   + +  +   K G  V +I L VQS  
Sbjct: 269 DFEDIKYGFGDLMDEIRKIDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEQIHLPVQSGS 328

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   ++  P +S   D+I   P +T  Q+E  +        
Sbjct: 329 TEVLKRMARKYSREHYLELVRKIKDAIPNVSLSTDIIVGFPGETDEQFEDTISMVEEVKY 388

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +  +GT    M    +  +P E     LY L   + +   L  
Sbjct: 389 DFAYTFIYSPREGTPAAVM----EDNVPMEVKKARLYRL-NEVLAGIALEQ 434


>gi|169334638|ref|ZP_02861831.1| hypothetical protein ANASTE_01041 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257376|gb|EDS71342.1| hypothetical protein ANASTE_01041 [Anaerofustis stercorihominis DSM
           17244]
          Length = 315

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 102 VSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGVQSLEEQSLRFLGRNHNASE 156
           V + V I+I   P  ++ +     ++          I LG+QS+  ++L+ L R H  ++
Sbjct: 107 VDNAVAISISTRPDCIDGDYLDFLKEVENMYHLDIIIELGLQSVNNETLKKLNRGHTLAD 166

Query: 157 AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            + A  L ++    +   +I ++P           +       + + ++ L IEK T+  
Sbjct: 167 YLKAALLIKSYDFEICTHIIASIPYDRDEDLVEAAKILSILNTNSVKIHSLYIEKNTILG 226

Query: 217 KMHKDGDLVL 226
           KM+++G + +
Sbjct: 227 KMYEEGKIEM 236


>gi|13474614|ref|NP_106183.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mesorhizobium
           loti MAFF303099]
 gi|81778168|sp|Q98BK3|MIAB_RHILO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|14025368|dbj|BAB51969.1| mlr5534 [Mesorhizobium loti MAFF303099]
          Length = 450

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 14/207 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + E + + +  G R ++    ++    G    
Sbjct: 168 CDKFCTFC---VVPYTRGSEVSRPVAQIVAEAERLAE-AGVREVTLLGQNVNAWHGQGEN 223

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  +L  +A+   ++     T  ++P  ++      +R     +  + L VQS  
Sbjct: 224 GEEWGLGRLLFRLAEIPGLARLRYTT--SHPRDMDDELISAHRDLPSLMPYLHLPVQSGS 281

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A + +A +   R   P ++   D I   P +T   +E  ++       
Sbjct: 282 DRILKAMNRRHTARDYLALLDRIRAARPDIALSGDFIVGFPGETEADFEATMELVRQVNY 341

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVL 226
                ++ +   GT   +M       L
Sbjct: 342 ASAFSFKYSPRPGTPGAEMPDHVPETL 368


>gi|299136986|ref|ZP_07030169.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidobacterium sp. MP5ACTX8]
 gi|298601501|gb|EFI57656.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidobacterium sp. MP5ACTX8]
          Length = 492

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 10/213 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          ++        EM W +Q      +   FF   T ++    
Sbjct: 208 CPAQCTFCLWP-QTLSGHAWRKRSSDDVAAEMAWAKQNFPD--VKEFFFDDDTFNI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                ++   K   +          +  + + +  +  ++AG   + +G +S + Q L+ 
Sbjct: 261 QKVRTIELCEKLKPLGITWSC---TSRVTTDRDTLKAMKEAGCRLLIVGFESGDPQILKN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +    ++   +  D I  LP +T       +  A     + + +   
Sbjct: 318 IKKGATVERARDFVKDCHDLGLIIHADFILGLPGETKESIWNTINFAKQLDCETIQVSVA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               GT FY   K  D +          + +  
Sbjct: 378 HAYPGTEFYDYAKRNDFITNENMEDGGGHQMAH 410


>gi|312114808|ref|YP_004012404.1| radical SAM protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219937|gb|ADP71305.1| Radical SAM domain protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 454

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 14/191 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C +C       +  +G++   +S    +  + +L     I  ++F     +L    
Sbjct: 221 CPYNCSFC-----AVQQTMGRKWRFKSPAKVVDEVIRLRDDHGIEGVWFKDSIFNLKPAW 275

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +    ++          + +E       + ++ +     + AG+ +I LG++S   +SL
Sbjct: 276 TKEFCRLM------IERKAGIEWQALTRINLLDEDELIMMKAAGLTQIDLGIESGSPKSL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L +     +    + LA+       F  +  +P +           A S  +D  S  
Sbjct: 330 VRLNKKITVDQIKEKVALAKRHLRVFGF-FMIGIPGEDEDDVRQTFDLAKSLELDRWSWS 388

Query: 206 QLTIEKGTLFY 216
             +   G+  Y
Sbjct: 389 IYSPLPGSPLY 399


>gi|56963955|ref|YP_175686.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
 gi|81366024|sp|Q5WFY0|MIAB_BACSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56910198|dbj|BAD64725.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
          Length = 520

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 19/215 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC            +    +  + E++ + +  G + I+ +      +G   P 
Sbjct: 232 CDKFCTYC---IVPYTRGKERSRLPEDIIAEVRDLARQ-GYKEITLLGQNVNAYGKDLPG 287

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    + D + +   +         ++P   + +  +   + G  V  I L VQ  
Sbjct: 288 S------YRLGDLMNEIHKIDIPRVRFTTSHPRDFDDHLIEVLAQGGNLVEHIHLPVQHG 341

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR +   + I   +  +   P  SF  DLI   P +T  Q++  L       
Sbjct: 342 NSDILKLMGRKYTREQYITLANKIKQAIPNASFTTDLIVGFPNETEEQFQDMLSLVEEIQ 401

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            D    Y  +  +GT   +M  +  + +  E +A 
Sbjct: 402 FDAAYTYIYSPREGTPAARMEDNVPMSVKKERLAR 436


>gi|261416594|ref|YP_003250277.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373050|gb|ACX75795.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325552|gb|ADL24753.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 501

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 19/196 (9%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC      N H  R +  ++      + E+Q++++      +  +FF   T + 
Sbjct: 217 CPNHCSYCVIPQTLNGHKFRRRDPKD-----VVDELQYIKENFED--LGEVFFEDDTFTA 269

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEE 142
              +++  I      N  +   ++IT   N    V ++  +  +KAG   + +G +S   
Sbjct: 270 -SHEHVRQI-----CNLILERGLKITWSCNARADVPLDLLKLMKKAGGREMCVGFESASP 323

Query: 143 QSLRFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           + L  + +   N  +AI     AR     +    +   P  T     M L  A     + 
Sbjct: 324 EVLEKIHKGVKNTDKAIEFTKNARKAGLLVHGCFMVGNPGDTPETLRMTLDYAKKLNPNT 383

Query: 202 LSLYQLTIEKGTLFYK 217
              Y +    GT  YK
Sbjct: 384 AQFYPIMAYPGTEAYK 399


>gi|332158106|ref|YP_004423385.1| hypothetical protein PNA2_0464 [Pyrococcus sp. NA2]
 gi|331033569|gb|AEC51381.1| hypothetical protein PNA2_0464 [Pyrococcus sp. NA2]
          Length = 429

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 79/200 (39%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC   F   V +     E  ++     ++   +     +  +  +G    +   
Sbjct: 152 CLNACTYCATRFARGVLKSYSP-EKIVEWVKWAIKQGYKEIWLSAEDTGCYGFDIGT--- 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAGV-NRISLGVQSL 140
             N+A +LD I     +     I +   NP+ V        + Y+   V   + L VQS 
Sbjct: 208 --NLAKLLDEITA---IEGEFRIRVGMMNPNHVIKFLDELIEAYQDDKVYKFLHLPVQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           + + LR +GRN+   E    ++  R  FP ++   D+I   P ++   ++  ++      
Sbjct: 263 DNEILRRMGRNYTVEEFEEIVNAFRKKFPDLNLHTDIIVGFPGESEEAFQKSVELIKRIK 322

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +++ + +   GT+  K 
Sbjct: 323 PDKVNVSRYSPRPGTIAAKW 342


>gi|257440231|ref|ZP_05615986.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
           A2-165]
 gi|257197265|gb|EEU95549.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
           A2-165]
          Length = 441

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 18/221 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC                +   + E +W+        +  +      P+     
Sbjct: 154 CNNRCHYCA---IPGIRGPLHSRDLADCVAEARWLA----GEGVKELIVVAQDPTAYGED 206

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 I  +LD + K   +       + A P  +  +     ++    V  + L +Q  
Sbjct: 207 WGKPGSICELLDKLNKVPGLEWIR--IMYAYPERITDDFIAAMKRNEKVVPYLDLPIQHC 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R    +E +  I   R   P ++    LI   P +T  Q+E          
Sbjct: 265 NDTILKNMNRRSTRAELLEVIGKLRREIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVR 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            D L  +  + E+ T+  KM    D         + +   T
Sbjct: 325 FDRLGCFAYSAEENTVAAKMDGQIDQETKDRRAELVMQIQT 365


>gi|227540651|ref|ZP_03970700.1| radical SAM superfamily protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227239495|gb|EEI89510.1| radical SAM superfamily protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 317

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 90/276 (32%), Gaps = 20/276 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ +S             +     ++  R          I+F   T +      + +
Sbjct: 51  CSYCNVDSFTPESARKLPTIKEQVEAGIERARNGYNAEKFI-IYFQPNTNTYAPTHLLKM 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLGVQSLEEQSLRF 147
           + D           V +++   P  ++        ++  +R+     +G++S+ +++L  
Sbjct: 110 MYDEAINVCP-EHTVGLSVGTRPDCIDFEKI-ALLESYTDRLDVDLEMGMESIYDETLTR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQ 206
           + R  +  E   A+ L +N    +    I+  P +T             +  +  + L+ 
Sbjct: 168 INRGCSHGELQKALALVQNSPLEICVHTIFGFPWETREMMLRYADEINKHPQIKFIKLHH 227

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHN 266
           L I +G++    +K     + S          T  +     L   +I      G      
Sbjct: 228 LHIVEGSIMGVQYKREPFHVFSIE------EYTDFLCEFIPLLRPDIIVQRLFGLADKEL 281

Query: 267 LNYWRYGDYIGIGPGAH-SRVKVG-SHRVAISIEKH 300
           L         G+G  A  + +  G   R AI   ++
Sbjct: 282 LI----APNWGLGKSAIQTYIDKGLEQRNAIQGSRY 313


>gi|225874580|ref|YP_002756039.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225791488|gb|ACO31578.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 492

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          ++        EM   ++L     +   FF   T ++    
Sbjct: 207 CPAQCTFCLWP-QTLSGHAWRKRSTDDVAAEMAHAKELFP--HVKEFFFDDDTFNI---- 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A  ++  AK   +          +  + +    +  R+AG   + +G +S + Q L+ 
Sbjct: 260 QKARTIELCAKLKPLGLTWSC---TSRVTTDRETLKAMREAGCRLLIVGYESGDPQILKN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +  D I  LP +T       +  A S  V+ + +   
Sbjct: 317 IKKGATVERARDFTRDCHDLGLTIHGDFILGLPGETKESIRNTINFAKSLDVETIQVSIA 376

Query: 208 TIEKGTLFY 216
               GT FY
Sbjct: 377 HAYPGTEFY 385


>gi|255020721|ref|ZP_05292781.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969837|gb|EET27339.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
           51756]
          Length = 437

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 77/197 (39%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C +C               F +     ++ +RQL   G R ++    ++    G  
Sbjct: 145 CDKFCTFC------VVPHTRGREFSRPMPDILREVRQLVDQGVREVTLLGQNVNAYRGAT 198

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQS 139
            LI   ++A +L+ +A+   +      T  ++P++++      +R   +    + L VQS
Sbjct: 199 GLIGEGDLAELLERLARIPDLLRLRYTT--SHPNNLDDRLIAAHRDIPILAAHLHLPVQS 256

Query: 140 LEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R H+ +  +  I    A     R+S D I   P +T   +   L+   + 
Sbjct: 257 GSDRILRRMHRKHSVASYLDKIARLRAARSDIRISSDFIVGFPGETDADFAATLELIEAV 316

Query: 198 AVDHLSLYQLTIEKGTL 214
             D    ++ +    T 
Sbjct: 317 RFDQSFSFKYSPRPNTP 333


>gi|170078520|ref|YP_001735158.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. PCC 7002]
 gi|229891029|sp|B1XQK7|MIAB_SYNP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169886189|gb|ACA99902.1| tRNA-i(6)A37 thiotransferase enzyme [Synechococcus sp. PCC 7002]
          Length = 451

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 15/237 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C + C YC            Q  + ++   EM+ + +  G + ++ +      +G   P 
Sbjct: 156 CNEHCTYC---VVPGVRGTEQSRYPEAIRAEMEELGRQ-GFKEVTLLGQNIDAYGRDLPG 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +N   + D +     V     I     +P        +  ++         +  Q
Sbjct: 212 TTPEGRNKYTLTDLLYYVHDVPGIERIRFATSHPRYFTERLIKACQELPKVCEHFHIPFQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + + L+ + R +   +    I+  R+  P   +S D I A P +T  Q+E  L+    
Sbjct: 272 SGDNEVLKAMRRGYTHEKYRRIINTIRSYMPDASISADAIVAFPGETEEQFENTLKLVDE 331

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D L+    +   GT            +  + +    + + Q        +A  I
Sbjct: 332 IGFDQLNTAAYSPRPGTPAATWDNQLSEEVKGDRLQRLNHLVAQKAAERSQRYAGRI 388


>gi|254302802|ref|ZP_04970160.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322994|gb|EDK88244.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 297

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCTFCS----MYKDKKFVIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++ +L+F
Sbjct: 85  LIQVLDYIREVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDDALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKVVELAKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQEGKYDYMEGIEVLKEMKLV 239


>gi|254292479|ref|YP_003058502.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814]
 gi|254041010|gb|ACT57805.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814]
          Length = 435

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 21/226 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-------ISSIFFGGGT 80
           C  +C +C     +  Y  G    + +    +  +RQL            +    +G   
Sbjct: 161 CDHRCTFC-----IIPYGRGNSRSVPA-GEVVDQVRQLVAKGHYEVVLTGVDLTSWGADL 214

Query: 81  PSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+     N+   IL        +  +    IE +    +      + K     + L  QS
Sbjct: 215 PNAPNLGNLVARILKLAPDLKQLRLSSIDAIEIDDQLFD---LIAHDKRIAPHLHLSFQS 271

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            +   L+ + R H+  +AI      R   P +SF  DLI   P +T   +   +      
Sbjct: 272 GDNMILKRMKRRHSREDAINLCQRLRAARPEISFGADLIAGFPTETDEMFANTMACVDEC 331

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +D+L ++  +   GT   ++ +        ++ A  L +  Q   
Sbjct: 332 GLDYLHVFPYSARPGTPAARIPQLN--GEIIKDRAAQLRDKGQERL 375


>gi|194017862|ref|ZP_03056471.1| radical SAM protein, family [Bacillus pumilus ATCC 7061]
 gi|194010514|gb|EDW20087.1| radical SAM protein, family [Bacillus pumilus ATCC 7061]
          Length = 321

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +      
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLITQFNEIKDRMHTKWKDGKYMAYFQAYTNT---HAP 106

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           + ++ +       +   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 107 LPVLKEKFETVMNLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  +   R    R+   +I  LP +         +      V  + ++
Sbjct: 167 MLINRAHDYECYVEGVEKLRKHGIRVCSHIINGLPLENRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + KGT   K ++ G L   S+   V L      I     +  
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLSQEEYVQLVCDQLEILPPEMIIH 271


>gi|254561877|ref|YP_003068972.1| MiaB-like tRNA modifying enzyme, 2-methylthioadenine synthetase
           [Methylobacterium extorquens DM4]
 gi|254269155|emb|CAX25121.1| MiaB-like tRNA modifying enzyme, putative 2-methylthioadenine
           synthetase [Methylobacterium extorquens DM4]
          Length = 410

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V     +      ++   +      +    +G    S + 
Sbjct: 139 CDHRCTFCVIPFG-RGNSRSVPVAEAVAQVCRIVEHGGREVVLTGVDLTAYGRDLDSDLS 197

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +   IL  +     +  +   ++EA     +      + +    +  + L +Q+ ++
Sbjct: 198 LGRLVRTILAEVPDLARLRLSSIDSVEA-----DAELIAAFAEEPRLMPHVHLSLQAGDD 252

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H+ ++AI      R +        DLI   P +T  Q+   L       + 
Sbjct: 253 LILKRMKRRHSRADAIRLCETLRELRPGLVFGADLIAGFPTETAAQFVRSLDLVAECGLT 312

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           HL ++  +    T   +M 
Sbjct: 313 HLHVFPYSPRPNTPAARMP 331


>gi|254457268|ref|ZP_05070696.1| cobalamin B12-binding:Radical SAM [Campylobacterales bacterium GD
           1]
 gi|207086060|gb|EDZ63344.1| cobalamin B12-binding:Radical SAM [Campylobacterales bacterium GD
           1]
          Length = 478

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 16/194 (8%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  KC +CD   F S +R    G+           + M+ L+    +  + F      + 
Sbjct: 214 CPFKCEFCDTSTFGSKIRYNSPGKVY---------EIMKHLSTEYGVKHLQFVDDLF-VA 263

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              ++  + + +  N     ++  +  A   +V+       +KAG   IS G++S  ++ 
Sbjct: 264 NNAHVLRLCELLIANKI---DMTWSCTARVDTVKPETLAMMKKAGCWEISFGLESGSDEM 320

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR + ++  A  +  A+        R+    +   P +T    +   +      +  ++L
Sbjct: 321 LREMKKSITAEVSARAVKWTSEAGIRVKGLFMLGYPGETKESVQTTKEFIKGLPLTTMNL 380

Query: 205 YQLTIEKGTLFYKM 218
            + T   G+  YK 
Sbjct: 381 SKFTPYPGSPIYKK 394


>gi|160942860|ref|ZP_02090099.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445761|gb|EDP22764.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
           M21/2]
          Length = 441

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 62/200 (31%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC       R  +   +             +      +  +      P+     
Sbjct: 154 CNNRCHYCAIP--GIRGPLHSRDMADCVAE-----ARWLAGEGVKELIVVAQDPTAYGED 206

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 I  +LD + K   +       + A P  +        ++    V  + L +Q  
Sbjct: 207 WGKPGSICELLDKLNKVPGLEWIR--IMYAYPERITDEFIAAMKRNEKVVPYLDLPIQHC 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R    +E +  I   R   P ++    LI   P +T  Q+E          
Sbjct: 265 NDTILKNMNRRSTRAELLEVIGKLRREIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVQ 324

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D L  +  + E+ T+  +M
Sbjct: 325 FDRLGCFAYSAEENTVAARM 344


>gi|261330375|emb|CBH13359.1| acetyltransferase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 666

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 79/239 (33%), Gaps = 40/239 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ +      +RQ     S             +  
Sbjct: 183 CPKDCHYCPNQPGIARSYLLKEPGVLRGYRNGWDPIRQFYDRASALENNGHVVDKIELII 242

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN------------------------VEITIEA 112
            GGT S    + +   + G         +                        + +TIE 
Sbjct: 243 LGGTFSFYPKKYVEEFITGNFYAANTYYDSTPLRPIGTLEQEITANEDARCRIIGVTIET 302

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  + ++  + +R  GV R+ +G+Q L++  L  + R+   ++ I AI    +   ++ 
Sbjct: 303 RPDYINLSELRRFRSLGVTRVQVGIQHLDDDILTIVNRDCPTAKTIVAIKRLLDAGFKVD 362

Query: 173 FDLIYALPKQTMTQWEMELQRALS-----YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +  LP  + ++     +   S     + VD   +Y       T     ++ G    
Sbjct: 363 AHWMPDLPGSSYSKDHEMFEYLFSEDNENFQVDQWKVYPTATVPYTKIEDWYRTGKYKP 421


>gi|295103959|emb|CBL01503.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 441

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 62/200 (31%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC       R  +   +             +      +  +      P+     
Sbjct: 154 CNNRCHYCAIP--GIRGPLHSRDMADCVAE-----ARWLAGEGVKELIVVAQDPTAYGED 206

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 I  +LD + K   +       + A P  +        ++    V  + L +Q  
Sbjct: 207 WGKPGSICELLDKLNKVPGLEWIR--IMYAYPERITDEFIAAMKRNEKVVPYLDLPIQHC 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R    +E +  I   R   P ++    LI   P +T  Q+E          
Sbjct: 265 NDTILKNMNRRSTRAELLEVIGKLRREIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVQ 324

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D L  +  + E+ T+  KM
Sbjct: 325 FDRLGCFAYSAEENTVAAKM 344


>gi|258511464|ref|YP_003184898.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478190|gb|ACV58509.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 497

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 17/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSL 83
           C K C YC     V   +  + + +         + +++     ++   ++   G     
Sbjct: 210 CNKFCTYC----IVPYTRGVERSRLPEDVLREVAELVQEGYQDITLLGQNVNDYGVD--- 262

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +   N A +L  +     V      T  +NP +          ++   V  I L VQS  
Sbjct: 263 LGTTNFARLLRQVNAVPGVGWIRFTT--SNPWNFTDELIDAIAESENVVEHIHLPVQSGN 320

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + LR + R+H     +  +   R+  P +S   DLI   P +T   ++  L+       
Sbjct: 321 NEILRRMNRSHTREYYLRLVDKIRSRIPGVSITTDLIVGFPGETEAHFQDTLRLVREVEF 380

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D+   +  +  + T   + + D  L
Sbjct: 381 DNAFTFIYSPRENTPAARWNDDTPL 405


>gi|167770099|ref|ZP_02442152.1| hypothetical protein ANACOL_01442 [Anaerotruncus colihominis DSM
           17241]
 gi|167667731|gb|EDS11861.1| hypothetical protein ANACOL_01442 [Anaerotruncus colihominis DSM
           17241]
          Length = 354

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 66/203 (32%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   S    +       I +  T++           +   +F   T +      +  
Sbjct: 89  CVFCS-PSGSGEFGGNPAESIAAQFTQVAARMSEKWDTPLRIAYFQAHTNTYAPVAVLRR 147

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +       V   V + I   P  +  +     +   +     + LG+QS+ +++ R +
Sbjct: 148 LYEQALACPGV---VGLAIATRPDCLPDDVCALLEELSRRTYLTVELGLQSIHDETGRQI 204

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +     ++           +   +I  LP +T        +      +  + ++ L 
Sbjct: 205 NRCYGYDTFLSGYERLHARNIPVGVHIINGLPGETRRMMVETARTLARLDLHLVKIHLLH 264

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + +GT   K+ + G   L +   
Sbjct: 265 VLEGTQLAKLWRAGAFELMTREA 287


>gi|257463840|ref|ZP_05628227.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 245

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 90/263 (34%), Gaps = 35/263 (13%)

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRALSYA 198
              +  + L R  +  EA+  +   R  F  +   D+IY  P+Q+  +   +++ A    
Sbjct: 1   FSNRGRKMLNRTFSKEEAVQRLQDLRKAFHGLLCIDIIYNYPEQSDEEVLEDIRIASDLG 60

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD--GDLVLPSENVAVDLYNLTQSITS--AHGLHAYEIS 254
           VD +S Y L I++G+   K       +     +          Q         L   +I+
Sbjct: 61  VDSISFYSLMIQEGSEILKNISKESIEKFYDIKRDEHLHNLFYQESLRRGYSLLELTKIT 120

Query: 255 NHSFLGAESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGH 313
           N             Y R  + + IG GA   V  +  + +   +  + ++    +R +  
Sbjct: 121 N-------GRDKYQYIRTHNLLPIGVGAGGHVEDISCYHMNKKMSFYSKTPKDSIRMSQ- 172

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERV 371
                             + GL   +  S    + L G       E+     + G++ + 
Sbjct: 173 ------------------LSGLFQFDSFSEIKLQELTGTRYPKVREKIEEYIKMGWL-QY 213

Query: 372 QFSRLRCTQRGMTMLDSVIANLA 394
           +  +   T+ G+   +++ A L 
Sbjct: 214 KNKQFSYTENGVFWGNNINAELL 236


>gi|188582088|ref|YP_001925533.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001]
 gi|179345586|gb|ACB80998.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001]
          Length = 410

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 73/201 (36%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   +   + +++ + +  G   + +      +G    S 
Sbjct: 139 CDHRCTFC---VIPFGRGHSRSVPVAEAVAQVRRIVEHGGREVVLTGVDLTAYGRDLASD 195

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +    +   IL  +     +  +   ++EA+P          + +    +  + L +Q+ 
Sbjct: 196 LSLGRLVRTILSEVPDLARLRLSSIDSVEADP-----ELIAAFAEESRLMPHVHLSLQAG 250

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H  ++AI      R++        DLI   P +T  Q+   L       
Sbjct: 251 DDLILKRMKRRHARADAIRLCRTLRDLRPGLVFGADLIAGFPTETEAQFARSLDLVEECE 310

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + HL ++  +   GT   +M 
Sbjct: 311 LTHLHVFPYSPRPGTPAARMP 331


>gi|16803701|ref|NP_465186.1| hypothetical protein lmo1661 [Listeria monocytogenes EGD-e]
 gi|224503673|ref|ZP_03671980.1| hypothetical protein LmonFR_14405 [Listeria monocytogenes FSL
           R2-561]
 gi|16411097|emb|CAC99739.1| lmo1661 [Listeria monocytogenes EGD-e]
          Length = 321

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKIQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|146293949|ref|YP_001184373.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           putrefaciens CN-32]
 gi|229890654|sp|A4Y9E1|MIAB_SHEPC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145565639|gb|ABP76574.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella putrefaciens
           CN-32]
          Length = 474

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 18/226 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTP---SL 83
           C  YC F              +   + E+  + +  G R +     ++    G     S+
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGATHDGSI 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +   +  I        +      ++P     +    Y      V+ + L VQS  
Sbjct: 216 CSFAELLRFVAAIDGI-----DRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R      ++S D I   P +T   +   ++       
Sbjct: 271 DRILTAMKRGHMAIEYKSIIRRLRKAREGIQISSDFIIGFPGETKEDFADTMKLIEEIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           DH   +  +   GT    +  + D+    + +A+    +TQ     
Sbjct: 331 DHSFSFIYSARPGTPAADLPDNVDMEEKKQRLAILQDRITQQAMRY 376


>gi|13959796|gb|AAK48994.1| USC2-1p [Myxococcus xanthus]
          Length = 382

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 40/119 (33%), Gaps = 11/119 (9%)

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
            D +G+G  A S +     +      +   SW   V +    V     LS++ Q    L+
Sbjct: 9   TDLLGLGVSAISHIGATYSQN----PRDLPSWEDAVDQGQLPVWRGVALSADDQLRAELI 64

Query: 333 MGLRLREGISVKDWEMLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTM 385
             L  +  +         G + +     +      LQ  G  E  +   +R ++ G  +
Sbjct: 65  QQLMCQGEVDGALLGQRHGVDFEQYFAEDLRSVQRLQDDGLAE-YRHGVVRASEPGRPL 122


>gi|15964158|ref|NP_384511.1| hypothetical protein SMc01115 [Sinorhizobium meliloti 1021]
 gi|81635228|sp|Q92SI7|MIAB_RHIME RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|15073334|emb|CAC41842.1| Probable tRNA-i(6)A37 modification enzyme, 2-methylthioadenine
           synthetase [Sinorhizobium meliloti 1021]
          Length = 472

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVAQIVAEAEKLVE-GGVREITLLGQNVNAWHGEGP- 237

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    + D + +   +     +     +P  ++ +  + +R     +  + L VQS
Sbjct: 238 ---HGREWSLGDLLRRLGEIDGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQS 294

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A+E +A +   R   P ++   D I   P +T   +E  L+     
Sbjct: 295 GSDRILKAMNRRHTAAEYLALVERIRAAQPDLALSGDFIVGFPGETDQDFEDTLRLVEEV 354

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++ +   GT   ++ +        E+V      + Q++ 
Sbjct: 355 NYAQAFSFKYSTRPGTPGAELKEQ-----VPEDVKAKRLEILQALL 395


>gi|47097506|ref|ZP_00235047.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|254829465|ref|ZP_05234152.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254898172|ref|ZP_05258096.1| hypothetical protein LmonJ_00115 [Listeria monocytogenes J0161]
 gi|254912335|ref|ZP_05262347.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254936662|ref|ZP_05268359.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|47014121|gb|EAL05113.1| conserved hypothetical protein TIGR01212 [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258601880|gb|EEW15205.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609258|gb|EEW21866.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293590316|gb|EFF98650.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 321

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|319641647|ref|ZP_07996331.1| hypothetical protein HMPREF9011_01929 [Bacteroides sp. 3_1_40A]
 gi|317386730|gb|EFV67625.1| hypothetical protein HMPREF9011_01929 [Bacteroides sp. 3_1_40A]
          Length = 428

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 85/230 (36%), Gaps = 30/230 (13%)

Query: 22  YVH---WPF-----CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+     PF     CVKKC +C +N+ V   K  +   + S   EM ++ +  G      
Sbjct: 189 YIPGKILPFMTSKGCVKKCAFC-YNTVVNNSK-WRPYSLTSVYREMDFLIENYGIT--GW 244

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           +F+       ++P+    I++              ++E + + V     +   KA V ++
Sbjct: 245 MFYDDNI--FVDPERAWTIIEKYKM--------PSSVELDLNRVNEKMVERALKANVAKL 294

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G++S  ++ L+ + +     +    + +  N+   +    +  LP ++    E  L  
Sbjct: 295 YIGIESGSDRMLKRMHKGITVKQVREKMQMCHNMGMNVDLSFMILLPNESPEDLEATLSL 354

Query: 194 ALSY------AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
                      +D    Y      GT F++       ++P  N     YN
Sbjct: 355 TRELEEYSNIKIDGPKCYN--PYPGTEFFQEVVASGWIIPKSNEEWAKYN 402


>gi|120597879|ref|YP_962453.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella sp.
           W3-18-1]
 gi|229890657|sp|A1RGV4|MIAB_SHESW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120557972|gb|ABM23899.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella sp. W3-18-1]
 gi|319427326|gb|ADV55400.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella putrefaciens
           200]
          Length = 474

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 18/226 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTP---SL 83
           C  YC F              +   + E+  + +  G R +     ++    G     S+
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGATHDGSI 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +   +  I        +      ++P     +    Y      V+ + L VQS  
Sbjct: 216 CSFAELLRFVAAIDGI-----DRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R      ++S D I   P +T   +   ++       
Sbjct: 271 DRILTAMKRGHMAIEYKSIIRRLRKAREGIQISSDFIIGFPGETKEDFADTMKLIEEIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           DH   +  +   GT    +  + D+    + +A+    +TQ     
Sbjct: 331 DHSFSFIYSARPGTPAADLPDNVDMEEKKQRLAILQDRITQQAMRY 376


>gi|307301303|ref|ZP_07581065.1| RNA modification enzyme, MiaB family [Sinorhizobium meliloti
           BL225C]
 gi|307317974|ref|ZP_07597411.1| RNA modification enzyme, MiaB family [Sinorhizobium meliloti AK83]
 gi|306896376|gb|EFN27125.1| RNA modification enzyme, MiaB family [Sinorhizobium meliloti AK83]
 gi|306903759|gb|EFN34346.1| RNA modification enzyme, MiaB family [Sinorhizobium meliloti
           BL225C]
          Length = 472

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVAQIVAEAEKLVE-GGVREITLLGQNVNAWHGEGP- 237

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    + D + +   +     +     +P  ++ +  + +R     +  + L VQS
Sbjct: 238 ---HGREWSLGDLLRRLGEIDGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQS 294

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A+E +A +   R   P ++   D I   P +T   +E  L+     
Sbjct: 295 GSDRILKAMNRRHTAAEYLALVERIRAAQPDLALSGDFIVGFPGETDQDFEDTLRLVEEV 354

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++ +   GT   ++ +        E+V      + Q++ 
Sbjct: 355 NYAQAFSFKYSTRPGTPGAELKEQ-----VPEDVKAKRLEILQALL 395


>gi|301063574|ref|ZP_07204091.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300442306|gb|EFK06554.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 291

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 79/202 (39%), Gaps = 8/202 (3%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C       R++V     ++    +++  R+  G R + ++FF  G    +  
Sbjct: 25  CPHNKCTFCMVYKKGPRFRVRS---VKGIEADLREARRSYGSR-VQTLFFPAGNTIAMPV 80

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +++  I       +  +                + N    +KAG++RI +G++S ++  L
Sbjct: 81  EDLIRICSCARSLFPELKRITVYGSSQYIHRKGLKNLARLKKAGLSRIHVGLESGDDVVL 140

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           R + +  +A E I A   AR     +S  L+  +    +T+   +       +   D + 
Sbjct: 141 RKIKKGTHAEEQIEAGLWAREAGIELSVYLLLGIGGRERTLQHAQNTASVLNALNPDFIR 200

Query: 204 LYQLTIEKGTLFYKMHKDGDLV 225
           +     ++ TL     + G+  
Sbjct: 201 VRTFLPKQNTLMLHQIRKGEFQ 222


>gi|217077399|ref|YP_002335117.1| Fe-S oxidoreductase family protein [Thermosipho africanus TCF52B]
 gi|217037254|gb|ACJ75776.1| Fe-S oxidoreductase family protein [Thermosipho africanus TCF52B]
          Length = 376

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 78/244 (31%), Gaps = 18/244 (7%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRR--YKVGQENFIQSF---LTEMQWMRQLTGPRSI 71
            +Y+       C   C YC       +       E  ++     +   + + +   P S 
Sbjct: 123 SLYMPIEITRGCPFSCGYCQTPRLAGKLVRHRPIEQIVEYSKIGVENNRKIARFISPNSF 182

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGV 130
                 G TP    P+ +  +L  + K             +  P SV     +  +K   
Sbjct: 183 GYGSKNGVTP---NPEAVDTLLYNLKKVGVEEIYFGTFPSDVRPESVNEEILKVIKKYVN 239

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           N+ I +G QS  E+ L  + R HN  E   A+ L +        D I+  P +T    E 
Sbjct: 240 NKYIVIGAQSGSERVLEMIKRGHNLEEIERALSLLKEYDFIPRVDFIFGFPFETDEDIEK 299

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             +         ++ Y+  +   T F  +       +    +    Y     +TS   L 
Sbjct: 300 TFEFIKKI----VNKYKAKVHAHT-FMPLPGTPLANIGPGVLTKKHYKFLGLLTSQGYLD 354

Query: 250 AYEI 253
            Y +
Sbjct: 355 GYWL 358


>gi|210620849|ref|ZP_03292266.1| hypothetical protein CLOHIR_00209 [Clostridium hiranonis DSM 13275]
 gi|210155061|gb|EEA86067.1| hypothetical protein CLOHIR_00209 [Clostridium hiranonis DSM 13275]
          Length = 323

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 73/228 (32%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF  +       Q + I++       +++    + I   +F   T +   
Sbjct: 52  CIYCSREGSGDFAGNPNDNLRKQFDEIKAM-----MLKKWPNAKYIG--YFQAFTNTYAP 104

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +           + ++I   P  +  +      +        + LG+Q++ +
Sbjct: 105 ---LEVLKERYETVLGFEDVIGLSISTRPDCLPDDVVDYLAELNERTNLWVELGLQTIHD 161

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++   + R H   + +      ++   +    +I  LP +         +       D +
Sbjct: 162 ETSDIINRGHTYQDFLDGFKKLKDRNIKTVVHIINGLPGEDKEMMMQTAKAVADMGADGI 221

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++ L I K T       +G +    +   ++L      I     +  
Sbjct: 222 KIHLLHIIKDTPLRDFLNNGKITPMEQEEYINLVCDQLEILPEEMVIH 269


>gi|300771417|ref|ZP_07081293.1| radical SAM protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762087|gb|EFK58907.1| radical SAM protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 317

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 90/276 (32%), Gaps = 20/276 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ +S             +     ++  R          I+F   T +      + +
Sbjct: 51  CSYCNVDSFTPESARKLPTIKEQVEAGIERARNGYNAEKFI-IYFQPNTNTYAPTHLLKM 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLGVQSLEEQSLRF 147
           + D           V +++   P  ++        ++  +R+     +G++S+ +++L  
Sbjct: 110 MYDEAINVCP-EHTVGLSVGTRPDCIDFEKI-ALLESYTDRLDVDLEMGMESIYDETLTR 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQ 206
           + R  +  E   A+ L +N    +    I+  P +T             +  +  + L+ 
Sbjct: 168 INRGCSHRELQKALALVQNSPLEICVHTIFGFPWETREMMLRYADEINKHPQIKFVKLHH 227

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHN 266
           L I +G++    +K     + S          T  +     L   +I      G      
Sbjct: 228 LHIVEGSIMGVQYKREPFHVFSIE------EYTDFLCEFIPLLRPDIIVQRLFGLADKEL 281

Query: 267 LNYWRYGDYIGIGPGAH-SRVKVG-SHRVAISIEKH 300
           L         G+G  A  + +  G   R AI   ++
Sbjct: 282 LI----APNWGLGKSAIQTYIDKGLEQRNAIQGSRY 313


>gi|71279941|ref|YP_270240.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Colwellia
           psychrerythraea 34H]
 gi|123631590|sp|Q47Y80|MIAB_COLP3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71145681|gb|AAZ26154.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Colwellia psychrerythraea
           34H]
          Length = 480

 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 79/249 (31%), Gaps = 19/249 (7%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    ++    +V     C K   YC F              +   L E+  + +  G
Sbjct: 137 DRLPEPKADGASAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPLDDVLYEIAQLAEQ-G 192

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN 121
            R ++ +      + G T       +I    D +    T+     I     +P     + 
Sbjct: 193 VREVNLLGQNVNAYRGET----HDGSICRFADLVRLVATIDGIDRIRYTTSHPVEFTDDI 248

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
            + Y      VN + L VQS  ++ L  + R H A E  + I   + + P +S   D I 
Sbjct: 249 IEAYTDVPELVNHLHLPVQSGCDRILTQMKRGHTALEYKSQIRKLKKVRPELSMSSDFII 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T   +   +    +   D    +  +   GT    +  D       + + +    
Sbjct: 309 GFPGETDEDFTATMDLIKAVDFDLSFSFIYSARPGTPAADLPDDISDQTKKDRLKLLQEQ 368

Query: 238 LTQSITSAH 246
           +T       
Sbjct: 369 ITHQALRIA 377


>gi|332969911|gb|EGK08913.1| TIGR01212 family radical SAM protein [Desmospora sp. 8437]
          Length = 342

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 84/237 (35%), Gaps = 21/237 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR---QLTGPRSISSIFF 76
           C  +        C +C      R       +  Q  + +   +R       P++    +F
Sbjct: 54  CPNRDGSVATGGCTFCS----PRGSGDFAGDRRQDLVKQFNTVRDRMHQKWPKAKYIGYF 109

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              + +      +  + + I +   V   V ++I   P  +  +  +   +        +
Sbjct: 110 QSFSNTYAPVDVLRPMYEAILEQPDV---VGLSIATRPDCLPDDVVELLAELNQRTYLWV 166

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++ + +   + R H+ +  +  +   R    R    +I+ LP++++       Q 
Sbjct: 167 ELGLQTIHDSTSELINRGHDYACFLDGVAKLRRHGIRTCVHIIHGLPQESVEMMLETAQA 226

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  +  + ++ L + + T   + +++G L L   +  + L   T  +     +  
Sbjct: 227 CAAMDIQGIKIHSLHLLRKTPMVRQYREGLLQLLDRDTYIKLVADTLEMLPPEMVVH 283


>gi|218961210|ref|YP_001740985.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729867|emb|CAO80779.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Cloacamonas
           acidaminovorans]
          Length = 427

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 13/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +S+   ++                G    S +  +
Sbjct: 151 CNNFCSYC-----IVPYVRGRERS-RSWQDIIEETISAGNQGKKDITLLGQNVNSYLNGE 204

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            N   +L  + +   +     IT  ++P  +     +    +      I L VQS  +  
Sbjct: 205 VNFPRLLIILNELDEIYRLRFIT--SHPKDLSEELIEVLANSAKICEHIHLPVQSGSDNI 262

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + RN+     I+ +       P ++   D++   P +T   ++  L    +   D  
Sbjct: 263 LKAMNRNYTVQHYISLVEKLHKFIPNIAITTDIMTGFPGETENDFQDTLSLMKTIEFDDA 322

Query: 203 SLYQLTIEKGT 213
             Y+ +   GT
Sbjct: 323 FCYKFSPRPGT 333


>gi|223044509|ref|ZP_03614536.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus capitis
           SK14]
 gi|222442106|gb|EEE48224.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus capitis
           SK14]
          Length = 514

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC     +  +  G+E   +     +  +R+L           G    S   + 
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIINEVRELAREGYQEITLLGQNVNSYGKDI 276

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +++   + D +     +         ++P        +     G  V  I L VQS    
Sbjct: 277 EDLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGNNA 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +     +  ++  +   P ++   D+I   P +T  Q+E  L        +H
Sbjct: 337 VLKIMGRKYTRESYLDLVNRIKTAIPNIALTTDIIVGYPNETEEQFEETLSLYDEVEFEH 396

Query: 202 LSLYQLTIEKGTLFYKM 218
              Y  +   GT   KM
Sbjct: 397 AYTYLYSQRDGTPAAKM 413


>gi|221106035|ref|XP_002155044.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 93

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 44  YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
             +  E  I+  L E Q M ++   + I S++FGGGTPSL  P+ I  +L+ + K   V 
Sbjct: 1   DNIDNELMIKCLLIEFQSMCRMYDVKKIKSVYFGGGTPSLAPPKLINRLLEEVCKYTNV- 59

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
            N EI++E NP+S E      ++ AG++R+S+GVQ
Sbjct: 60  -NCEISMEVNPTSTEKKKLSDFKSAGISRVSIGVQ 93


>gi|189426041|ref|YP_001953218.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422300|gb|ACD96698.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 622

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 14/192 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C    +          + +     E+ ++ +                 +    
Sbjct: 192 CPYACEFC----YDGMGDRKVRRYPLDRMEQELAYLVERGAS------QIFALDSTFNTD 241

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +        +      + +V    E     ++    Q + +   + + +G+QS +     
Sbjct: 242 K--KRAKHLLRLIRETAPDVHFHFEVRHELLDKEQAQLFAQLTCS-VQIGLQSADPAVAG 298

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +GR  N  E  A + L  +      FDLIY LP   + ++   L  ALS   +HL ++ 
Sbjct: 299 GVGRTFNRDEFTAKVMLLNDSGATFGFDLIYGLPDDCLDKFREGLNFALSLYPNHLDIFP 358

Query: 207 LTIEKGTLFYKM 218
           L +  GT     
Sbjct: 359 LAVLPGTKVAHK 370


>gi|313112838|ref|ZP_07798485.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624908|gb|EFQ08216.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 441

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC       R  +   +             +      +  +      P+     
Sbjct: 154 CNNRCHYCAIP--GIRGPLHSRDMADCVAE-----ARWLAGEGVKELIVVAQDPTAYGED 206

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 I  +LD + K   +       + A P  +        ++    V  + L +Q  
Sbjct: 207 WGKPGSICELLDKLNKVPGLEWIR--IMYAYPERITDEFIAAMKRNEKVVPYLDLPIQHC 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R  N +E +  I   R   P ++    LI   P +T  Q+E          
Sbjct: 265 NDTILKNMNRRSNRAELLEVIGKLRREIPGITLRTTLIAGFPGETEEQFEDLCNFVKEVK 324

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D L  +  + E+ T+  KM
Sbjct: 325 FDRLGCFAYSAEENTVAAKM 344


>gi|192361583|ref|YP_001982120.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cellvibrio
           japonicus Ueda107]
 gi|229890473|sp|B3PER6|MIAB_CELJU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|190687748|gb|ACE85426.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cellvibrio japonicus
           Ueda107]
          Length = 456

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 88/264 (33%), Gaps = 16/264 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    ++ +  +V     C K C +C       R +             +   +Q   
Sbjct: 143 DKLPQPDADGVSAFVSIMEGCSKYCTFC--VVPYTRGEEVSRPVADVMAEVIHLAKQGVR 200

Query: 68  PRSI--SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
             ++   ++    G  +     ++A ++  IA    +      T  ++P        + Y
Sbjct: 201 EVNLLGQNVNAYRGAAADGTIVDLAELITYIAAVDGIDRIRFTT--SHPVEFTDALIEVY 258

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
            +    V+ + L VQS  ++ L  + R H   E  + +   +   P +SF  D I   P 
Sbjct: 259 NQVPELVSHLHLPVQSGSDRILMAMKRGHTVLEYKSKLRRIKKNRPNISFSSDFIIGFPG 318

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T   +E  ++       D    +  +   GT    +  D    +  + +A+    +TQ 
Sbjct: 319 ETDADFEATMKLIHDMEFDTSFSFIYSPRPGTPAADLPDDTPEEVKKQRLAILQDRITQQ 378

Query: 242 ITSAHGL-----HAYEISNHSFLG 260
             +             +S +S   
Sbjct: 379 AMAISRRMVGNTERILVSGYSKKD 402


>gi|298506510|gb|ADI85233.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase with TPR domain [Geobacter sulfurreducens
           KN400]
          Length = 864

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 28  CVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C       R+ +    ++       +   R+      +  +     T +    
Sbjct: 506 CPSKCSFCGNPVLWGRKIRFYSTDY------CIDMFRKALARLPVPYLMIADDTFT---- 555

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N    L+          +   +      ++E       R+AG   I +GV+S   + L 
Sbjct: 556 ANQQRTLNMCDAIIGNKLDFLWSCSTRVDAMEDKVLHRMRRAGCQEIMIGVESGSPEILE 615

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +       +     A+     + + ++     +T    +  +    +   +   L  
Sbjct: 616 RIHKGITPEMVLTVTRAAKKYGMLVHYYMMVINRGETPDTLQASIDLIKAGRPNSYDLTP 675

Query: 207 LTIEKGT 213
           L    GT
Sbjct: 676 LMFLPGT 682


>gi|218282314|ref|ZP_03488604.1| hypothetical protein EUBIFOR_01186 [Eubacterium biforme DSM 3989]
 gi|218216687|gb|EEC90225.1| hypothetical protein EUBIFOR_01186 [Eubacterium biforme DSM 3989]
          Length = 309

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 71/201 (35%), Gaps = 8/201 (3%)

Query: 35  CDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S +          ++  + +   ++ M Q   P  I   +F   + +    + +  
Sbjct: 52  CTFCSSMGSGDSILCFDDSLQKQYQEGLKRM-QNKWPDCIGFAYFQSYSNTYAPLETLKK 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSLEEQSLRFLGR 150
           + D   KN  +     + I      +                  LG+QS+ E ++    R
Sbjct: 111 VYDPFFKNPDIPG---VAIATRADCLNDEIIDYLNSQNKEVWLELGLQSVHEGTMEKCNR 167

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+       +   ++   +    +I  LP ++ +     +++   + +D + ++ L + 
Sbjct: 168 KHSTKIVFDWLDKLKSTNIKTCVHIINGLPNESKSDMLETVKQISKHPIDAIKIHMLHLI 227

Query: 211 KGTLFYKMHKDGDLVLPSENV 231
           +GT   K +K+    + +   
Sbjct: 228 EGTQMAKEYKEHPFHILTLEE 248


>gi|168187020|ref|ZP_02621655.1| radical SAM protein, family [Clostridium botulinum C str. Eklund]
 gi|169295078|gb|EDS77211.1| radical SAM protein, family [Clostridium botulinum C str. Eklund]
          Length = 310

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 76/224 (33%), Gaps = 11/224 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C YC   S         +    I S   +++ M +    +     +F   T +    + +
Sbjct: 48  CIYC---SERGSGDFAGDRHFSISSQFDDIKEMMKNKWKKGKYIAYFQAYTNTYAPIEEL 104

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLR 146
               +   +   V   V ++I   P  +         +        + LG+Q+  E + +
Sbjct: 105 RRKYEEAVREEGV---VALSIATRPDCLSDEVVDLISEFNNKVYTWVELGLQTSNETTAK 161

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R ++      A+   R     +    I+ LP +        ++      +  + ++ 
Sbjct: 162 LINRGYSIPVFEDALTRLREKNIDVVVHTIFGLPGEDREDMINTIRYLREKDIQGIKIHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L + KGT   K+++ G L    ++  +D+     S+     +  
Sbjct: 222 LHLLKGTPMVKLYEQGKLKFLEQDEYIDIIVKAVSMLPQDIVIH 265


>gi|315303475|ref|ZP_07874062.1| radical SAM protein, family [Listeria ivanovii FSL F6-596]
 gi|313628157|gb|EFR96703.1| radical SAM protein, family [Listeria ivanovii FSL F6-596]
          Length = 321

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +  + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVTELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ + + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGQLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        Q+ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVKKLQAHNIRICTHIINGLPKETPEMMMETTQKVVDSGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|167045585|gb|ABZ10235.1| putative uncharacterized protein family UPF0004 [uncultured marine
           crenarchaeote HF4000_APKG10I20]
          Length = 472

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 13/194 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C +C            +    +    E++ +        I    ++   G    L 
Sbjct: 180 CDKFCTFC---VVPFTRGREKSREPEELFEEIRHLVNHGAKEIILLGQNVNSYGKR-GLK 235

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEE 142
           +P     +L GIA+   V      T  ++P+    +  + YR   +  N + L VQS   
Sbjct: 236 KPVPFHELLYGIAEIPGVQRLRFTT--SHPNDFTRDTIRAYRDLDILMNHLHLPVQSGNN 293

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L+ + R+H   E +  +   ++  P +S   D+I   P +T   +   L+        
Sbjct: 294 QMLKAMRRDHTIEEYLDLLAELKSEVPGISLSTDIIVGFPGETDEAFGDTLKIMEEVGYS 353

Query: 201 HLSLYQLTIEKGTL 214
              ++  +   GT 
Sbjct: 354 SSFMFAYSPRPGTP 367


>gi|167044878|gb|ABZ09545.1| putative uncharacterized protein family UPF0004 [uncultured marine
           crenarchaeote HF4000_APKG8D22]
          Length = 451

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 13/194 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C +C            +    +    E++ +        I    ++   G    L 
Sbjct: 159 CDKFCTFC---VVPFTRGREKSREPEELFEEIRHLVNHGAKEIILLGQNVNSYGKR-GLK 214

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEE 142
           +P     +L GIA+   V      T  ++P+    +  + YR   +  N + L VQS   
Sbjct: 215 KPVPFHELLYGIAEIPGVQRLRFTT--SHPNDFTRDTIRAYRDLDILMNHLHLPVQSGNN 272

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L+ + R+H   E +  +   ++  P +S   D+I   P +T   +   L+        
Sbjct: 273 QMLKAMRRDHTIEEYLDLLAELKSEVPGISLSTDIIVGFPGETDEAFGDTLKIMEEVGYS 332

Query: 201 HLSLYQLTIEKGTL 214
              ++  +   GT 
Sbjct: 333 SSFMFAYSPRPGTP 346


>gi|157693436|ref|YP_001487898.1| hypothetical protein BPUM_2680 [Bacillus pumilus SAFR-032]
 gi|157682194|gb|ABV63338.1| hypothetical protein BPUM_2680 [Bacillus pumilus SAFR-032]
          Length = 321

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +      
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLVTQFNEIKDRMHTKWKDGKYMAYFQAYTNT---HAP 106

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           + ++ +       +   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 107 LPVLKEKFETVMNLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  +   R    R+   +I  LP +         +      V  + ++
Sbjct: 167 MLINRAHDYECYVEGVEKLRKHGIRVCSHIINGLPLENRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + KGT   K ++ G L   S+   V L      I     +  
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLSQEEYVQLVCDQLEILPPEMIIH 271


>gi|148241703|ref|YP_001226860.1| 2-methylthioadenine synthetase [Synechococcus sp. RCC307]
 gi|229891031|sp|A5GRJ8|MIAB_SYNR3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|147850013|emb|CAK27507.1| 2-methylthioadenine synthetase [Synechococcus sp. RCC307]
          Length = 453

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 83/257 (32%), Gaps = 18/257 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +SL  +V+  + C ++C YC            Q    Q+   EM+ +   
Sbjct: 136 LEDITTARRDSSLCAWVNVIYGCNERCTYC---VVPSVRGQEQSRLPQAIRLEMEGLAA- 191

Query: 66  TGPRSISSI-----FFGGGTPSLIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           +G + I+ +      +G   P +    +    + D +     V     I     +P    
Sbjct: 192 SGYKEITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHVHDVKGIERIRFATSHPRYFT 251

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
               +   +         +  QS +++ L+ + R +  +     +   R + P   +S D
Sbjct: 252 ERLIEACAELPKVCEHFHVPFQSGDDELLKAMARGYTTARYRRIVEQIRKLMPDAAISAD 311

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            I   P +T  Q+   L+       D L+    +    T         +  +  E +   
Sbjct: 312 AIVGFPGETDAQFRRTLELVDEIGFDLLNTAAYSPRPNTPAADWPDQVEEHVKVERLKEL 371

Query: 235 LYNLTQSITSAHGLHAY 251
             N      +      Y
Sbjct: 372 --NALVERKAKACSQRY 386


>gi|53804481|ref|YP_113916.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
           str. Bath]
 gi|81682096|sp|Q608N1|MIAB_METCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|53758242|gb|AAU92533.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
           str. Bath]
          Length = 458

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 12/196 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  + +  G R +     ++    G  +    
Sbjct: 157 CGKYCTFCVVPYTRGEEISRPVDDVIAEIVALAEQ-GVREVNLLGQNVNAYRGVLADGGM 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++AL++  +A    +      T  ++P        + +R     V+ + L VQS  ++ 
Sbjct: 216 ADLALLMHYVAAVDGIDRIRFTT--SHPVEFSDALIEAFRDIPQLVSHLHLPVQSGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R H  +E +A +   R I P +S   D I   P +T   +E  +        D  
Sbjct: 274 LRLMKRGHTRAEYMAKVAKLREIRPDLSLSSDFIVGFPGETDEDFEDTMALIEQLGFDQS 333

Query: 203 SLYQLTIEKGTLFYKM 218
             +  +   GT    M
Sbjct: 334 FSFIFSARPGTPAAAM 349


>gi|39997572|ref|NP_953523.1| TPR domain/radical SAM/B12 binding domain protein [Geobacter
           sulfurreducens PCA]
 gi|39984463|gb|AAR35850.1| TPR domain/radical SAM/B12 binding domain protein [Geobacter
           sulfurreducens PCA]
          Length = 864

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 28  CVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C       R+ +    ++       +   R+      +  +     T +    
Sbjct: 506 CPSKCSFCGNPVLWGRKIRFYSTDY------CIDMFRKALARLPVPYLMIADDTFT---- 555

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N    L+          +   +      ++E       R+AG   I +GV+S   + L 
Sbjct: 556 ANQQRTLNMCDAIIGNKLDFLWSCSTRVDAMEDKVLHRMRRAGCQEIMIGVESGSPEILE 615

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +       +     A+     + + ++     +T    +  +    +   +   L  
Sbjct: 616 RIHKGITPEMVLTVTRAAKKYGMLVHYYMMVINRGETPDTLQASIDLIKAGRPNSYDLTP 675

Query: 207 LTIEKGT 213
           L    GT
Sbjct: 676 LMFLPGT 682


>gi|116247590|gb|ABJ90160.1| MoeK5 [Streptomyces ghanaensis ATCC 14672]
          Length = 407

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C       +  V +++  +S    +  M +L     +  I F     +L    
Sbjct: 169 CPFKCSFC------FKQAVDKKSMYRSPEDVVGEMTELKERWGVKEIMFYDDVFTL---- 218

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +           V          V     +    AG  R+  G++  + + L  
Sbjct: 219 HRGRVREICGLIGETGLKVRWEAPTRVDLVPEPLLEAMAGAGCVRLRFGIEHGDSEILER 278

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+  A     +     I     +T  Q+   +  A    +D+ S Y  
Sbjct: 279 MRKESDIQKIEKAVTSAHEAGIKGFGYFIVGWLGETREQFRRTVDLACRLPLDYASFYTA 338

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 339 TPLPGTPLH 347


>gi|254520435|ref|ZP_05132491.1| radical SAM protein [Clostridium sp. 7_2_43FAA]
 gi|226914184|gb|EEH99385.1| radical SAM protein [Clostridium sp. 7_2_43FAA]
          Length = 307

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 69/218 (31%), Gaps = 21/218 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFF 76
           C  +        C +C      R       +   S   + +  + +   +        +F
Sbjct: 35  CPNRDGKVAKGGCTFCS----ARGSGDFAGSRTLSITKQFEDRKDMMEKKWKDGKLIAYF 90

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRI 133
              T +    + +            V   V I+I   P  ++ +  +   +        +
Sbjct: 91  QAYTNTYAPVEELRRKYKEALTQKNV---VAISIATRPDCIDDDVLEFLTELNEKTYLIV 147

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++ +++ R   R ++       +         +    I+ LP +T       +  
Sbjct: 148 ELGLQTINDETARNFNRGYDFKVFDDTLKRLLERNIEVVAHTIFGLPGETEEDMLRTVDY 207

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
                   +  + L + +GT   + ++ G+L L ++  
Sbjct: 208 IAHSGAKGIKFHLLHLMEGTKMVEQYESGELKLLTQEQ 245


>gi|282881872|ref|ZP_06290523.1| radical SAM domain protein [Peptoniphilus lacrimalis 315-B]
 gi|281298281|gb|EFA90726.1| radical SAM domain protein [Peptoniphilus lacrimalis 315-B]
          Length = 288

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 79/215 (36%), Gaps = 10/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    ++ +        ++    ++  M Q         IF   G   +++ 
Sbjct: 25  CAHNKCSFC----YMYKDDNFIIRPLEDIKKDLIEMSQY--GSYWRRIFLADGDALVLKT 78

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            ++  IL  I + +  +          + +   +   +  R AG+  + +G +S +++ L
Sbjct: 79  SDLLEILKTIKQYYPNIERVSSYATAGDINRKSIEELKALRDAGLEMLYIGFESGDDEIL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           R + +     + ++A+   + +  + S  +I  L          +   +       D++S
Sbjct: 139 RKINKGLTYKDYVSAMAKCKEVGFKTSITIIAGLGGVELMEQNAKGTAKIISETKPDYVS 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              + I K T  Y  + +G   +P+    +    +
Sbjct: 199 YLTMRIYKNTPLYLDYINGKFNMPNAEEILQEMKI 233


>gi|126652507|ref|ZP_01724672.1| YmcB [Bacillus sp. B14905]
 gi|126590635|gb|EAZ84751.1| YmcB [Bacillus sp. B14905]
          Length = 514

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 70/200 (35%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +  +R+L        +  G    +  +  
Sbjct: 223 CDKFCTYC-----IVPYTRGKERS-RRPEEIIAEVRELAAAGYQEIMLLGQNVNAYGKDF 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D +     +         ++P   +    +   K G  V  I L VQS    
Sbjct: 277 EDIEYRLGDLMDALRKIDIPRIRFTTSHPRDFDDQLIEVLAKRGNLVEHIHLPVQSGSND 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   +   P ++   D+I   P +T  Q+E  L        + 
Sbjct: 337 ILKIMARKYTREHFLTLVEKIKAAIPEVTLTTDIIVGYPNETEEQFEETLSLYREVGFEA 396

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
              Y  +  +GT   KM  +
Sbjct: 397 AFTYIYSPREGTPAAKMVDN 416


>gi|330828617|ref|YP_004391569.1| tRNA methylthiotransferase [Aeromonas veronii B565]
 gi|328803753|gb|AEB48952.1| tRNA methylthiotransferase [Aeromonas veronii B565]
          Length = 477

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 14/217 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + Q  G R ++ +         P+  
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPLDDVLYEIAQLAQQ-GVREVNLLGQNVNAYRGPTF- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +     +     I     +P     +  + Y+     V+ + L VQS  
Sbjct: 212 -DGGICTFAELLRLVAAIDGIDRIRYTTSHPIEFTDDIIEVYKDTPEVVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P ++   D I   P +T   +E  ++       
Sbjct: 271 DRILTMMKRPHTILEYKSKIRRLRAARPDITISSDFIVGFPNETDEDFEATMKLIEDVGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           D    +  +   GT    M  D D+ +    +A   +
Sbjct: 331 DMSFSFIFSPRPGTPAADMPDDVDMEVKKARLARLQH 367


>gi|328953260|ref|YP_004370594.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Desulfobacca acetoxidans DSM 11109]
 gi|328453584|gb|AEB09413.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Desulfobacca acetoxidans DSM 11109]
          Length = 501

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 27/219 (12%)

Query: 24  HWPF-------------CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGP 68
           H P+             C  +C YC +       RY+V     + + +  +  +      
Sbjct: 213 HIPYLRDPYVSIYTGRGCPSRCSYCLWPQTFTGRRYRVRSVADVTAEVRRILELFPQAQE 272

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
                  F          Q++A  L  +   W+ ++ V  + E           +  ++ 
Sbjct: 273 VFFDDDTFTAHGE---RAQHLARELRPLKCVWSATARVTTSYET---------LKALKEG 320

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
           G+  + +G +S   Q L+ + +      A       + +  ++    +  LP +T    +
Sbjct: 321 GLRLLVVGYESGNAQILKNIHKGATPELARRFTRWCKELGIQIHGTFMVGLPGETPATLK 380

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
             ++ A     D + +   T   GT F+ +        P
Sbjct: 381 ESMRFACELEPDTIQVSLATPYPGTEFFDLCTRQGYFRP 419


>gi|153940354|ref|YP_001392908.1| radical SAM family protein [Clostridium botulinum F str. Langeland]
 gi|168181023|ref|ZP_02615687.1| radical SAM protein, TIGR01212 family [Clostridium botulinum NCTC
           2916]
 gi|152936250|gb|ABS41748.1| radical SAM protein, TIGR01212 family [Clostridium botulinum F str.
           Langeland]
 gi|182668096|gb|EDT80075.1| radical SAM protein, TIGR01212 family [Clostridium botulinum NCTC
           2916]
 gi|295320885|gb|ADG01263.1| radical SAM protein, TIGR01212 family [Clostridium botulinum F str.
           230613]
 gi|322807879|emb|CBZ05454.1| predicted Fe-S oxidoreductase [Clostridium botulinum H04402 065]
          Length = 310

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 84/241 (34%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I     +++ + +        
Sbjct: 36  CPNRDGKVSKGGCIYCSERGSGDF--------AGDRNFKIHKQFEDIKKIMKEKWSSDKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAG 129
             +F   T +      + ++ +   +  +    V + I   P  ++ +     +   K  
Sbjct: 88  IAYFQAYTNTYAP---VNILREKYEEAMSEEGVVALAIATRPDCLDQDVLNLIEELSKKI 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ +++ + + R +  +    A+   R     +    I+ LP +T      
Sbjct: 145 YIWVELGLQTVNDETAKIINRGYKLNVFEKAVKDLRERNIDIVVHSIFGLPGETKEDMIG 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  +  + L + K T   K+++ G+L     +  V+L     ++   + + 
Sbjct: 205 TVKYISKLDIQGVKFHLLHLLKDTPLVKLYESGNLEFLDMDEYVELICEAITLLPPNMVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|72392723|ref|XP_847162.1| acetyltransferase [Trypanosoma brucei TREU927]
 gi|62359207|gb|AAX79650.1| acetyltransferase, putative [Trypanosoma brucei]
 gi|70803192|gb|AAZ13096.1| acetyltransferase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 666

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 40/239 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ +      +RQ     S             +  
Sbjct: 183 CPKDCHYCPNQPGIARSYLLKEPGVLRGYRNGWDPIRQFYDRASALENNGHVVDKIELII 242

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSN------------------------VEITIEA 112
            GGT S    + +   + G         +                        + +TIE 
Sbjct: 243 LGGTFSFYPKKYVEEFITGNFYAANTYYDSTPLRPIGTLEQEITANEDARCRIIGVTIET 302

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  + ++  + +R  GV R+ +G+Q L++  L  + R+   S+ I AI    +   ++ 
Sbjct: 303 RPDYINLSELRRFRSLGVTRVQVGIQHLDDDILTIVNRDCPTSKTIVAIKRLLDAGFKVD 362

Query: 173 FDLIYALPKQTMTQWEMELQRALS-----YAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
              +  LP  + ++     +   S     + VD   +Y       T     ++ G    
Sbjct: 363 AHWMPDLPGSSYSKDHEMFEYLFSEDNENFQVDQWKVYPTATVPYTKIEDWYRTGKYKP 421


>gi|332292317|ref|YP_004430926.1| RNA modification enzyme, MiaB family [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170403|gb|AEE19658.1| RNA modification enzyme, MiaB family [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 483

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 100/265 (37%), Gaps = 25/265 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    QS L E+Q + +       L G    S +++GGG 
Sbjct: 179 CDNMCTFC---VVPFTRGRERSRDPQSILEEVQDLAEKGFKEITLLGQNVDSYLWYGGGL 235

Query: 81  ------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  S +      N A ++D +AK          T  +NP  + ++  +   K    
Sbjct: 236 KKDFDKASEMAKATAVNFAQLMDTVAKAQPKMRIRFST--SNPQDMTLDVIEVMAKHKNV 293

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
            N I L VQS  ++ L+ + R H  +E    I   +N+ P +    D+I   P +T    
Sbjct: 294 CNYIHLPVQSGSDRILQLMNRQHTVAEYKTLIDNIKNLIPHIGISQDMITGFPTETEEDH 353

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L        D   ++  +   GT+  +  +D   +   +    D+ +L ++I+  + 
Sbjct: 354 QGTLDLINYVKYDFGFMFYYSERPGTMAERKMEDDIPLAIKKRRLQDVIDLQRAISRDNL 413

Query: 248 LHAYEISNHSFLGAESLHNLNYWRY 272
           L   + +    +  ES  N + W  
Sbjct: 414 LRYQDQTVEILIEKESKKNKDEWSG 438


>gi|238893721|ref|YP_002918455.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238546037|dbj|BAH62388.1| putative tRNA-thiotransferase and tRNA-methylthiotransferase
           bifunctional enzyme [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 536

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 74/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 219 CNKYCTYC---VVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 274

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +    YR     V+ + L VQ
Sbjct: 275 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQ 329

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 330 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 389

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P  +    LY L + I     
Sbjct: 390 VNFDMSYSFIFSARPGTPAADMVD----DVPEADKKQRLYILQERINQQAM 436


>gi|225017551|ref|ZP_03706743.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
           DSM 5476]
 gi|224949701|gb|EEG30910.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
           DSM 5476]
          Length = 441

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 62/203 (30%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +  +    L ++    +      +  +       +     
Sbjct: 155 CDNNCTYCA-------IPAIRGPYRSRKLEDIVEEAEWLASSGVKELIVVAQDTTRYGSD 207

Query: 88  NIALIL--DGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +   + + +   +   V I +    P  V         +       I + +Q +  
Sbjct: 208 LYGELKLPELLRRLCQIDGFVWIRVLYCYPEMVTDELLDVLAEEPKMAKYIDIPIQHINS 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
             LR + R     E ++ +   R   P ++    LI   P +T  Q+E  ++       D
Sbjct: 268 AVLRRMHRRSTREEILSVVQRVRERVPNITLRTTLIAGFPGETKEQFEELVEFVKESKFD 327

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            L  +  + E+GT   K+    D
Sbjct: 328 RLGCFAYSQEEGTPAAKLPDQLD 350


>gi|169632399|ref|YP_001706135.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter
           baumannii SDF]
 gi|229890410|sp|B0VQX2|MIAB_ACIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169151191|emb|CAO99868.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter
           baumannii]
          Length = 483

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LGFDHSYSFVYSKRPGTP 380


>gi|109898523|ref|YP_661778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudoalteromonas
           atlantica T6c]
 gi|122971932|sp|Q15TR4|MIAB_PSEA6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|109700804|gb|ABG40724.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudoalteromonas
           atlantica T6c]
          Length = 477

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 76/226 (33%), Gaps = 16/226 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN-- 88
           C  YC F              +   L E+  + +  G R ++ +  G    +   P +  
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVDDVLLEVAQLAEQ-GVREVNLL--GQNVNAFRGPHHDG 213

Query: 89  ----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                A +L+ +A    +      T  ++P     +    Y      V+ + L VQS  +
Sbjct: 214 AICTFAELLEMVASIDGIDRIRYTT--SHPVEFTDDIIDAYATIPELVDHLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R I P +S   D I   P +T   +E  +    +   D
Sbjct: 272 RVLNLMKRGHTAIEYKSKIRKLRKIRPNLSMSSDFIIGFPGETDDDFEATMDLIQAMDFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +  +   GT    +  D       E + +    +TQ      
Sbjct: 332 LSFSFIYSARPGTPAADLPDDVSETTKKERLQLLQNRITQQALRIA 377


>gi|117924735|ref|YP_865352.1| RNA modification protein [Magnetococcus sp. MC-1]
 gi|229890560|sp|A0L7K3|MIAB_MAGSM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|117608491|gb|ABK43946.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Magnetococcus sp. MC-1]
          Length = 437

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 77/204 (37%), Gaps = 14/204 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C K C +C     V  Y  G+E    + + L E + + Q  G R +  +       + ++
Sbjct: 154 CDKFCAFC-----VVPYTRGREWSRPVAAILAETEALAQQ-GVREVLLLGQNVNAYAGVD 207

Query: 86  PQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            + ++  L  + +   +   +E    + ++P  +  +  + + +       + L +QS  
Sbjct: 208 EEGVSYDLALLIRRVALIEGIERIRFVTSHPVDMNEDLVEVFGEIEQLAPYLHLPIQSGS 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  + R H   E    +   R + P ++   D I   P +T   ++  L        
Sbjct: 268 DAILAAMQRGHTVEEYCTWVEKVRAVCPDVALASDFIVGFPGETEQDFQATLDLISRLGF 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           DH   ++ +   GT    M +  D
Sbjct: 328 DHAYSFKYSSRPGTPAADMPEQVD 351


>gi|322435267|ref|YP_004217479.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidobacterium sp. MP5ACTX9]
 gi|321162994|gb|ADW68699.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidobacterium sp. MP5ACTX9]
          Length = 496

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 12/214 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          ++        EM   ++L     +   FF   T ++    
Sbjct: 212 CPAQCTFCLWP-QTLSGHAWRKRSTDDVAAEMANAKKLFP--HVKEFFFDDDTFNI---- 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                ++  AK   ++    IT              +  ++AG   + +G +S + Q L+
Sbjct: 265 QKERTIELCAKLKPLN----ITWSCTSRVTTHRETLKAMKEAGCRLLIVGFESGDPQILK 320

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +      A   +    ++   +  D I  LP +T       +  A S   + + +  
Sbjct: 321 NIKKGATVERAREFVKDCHDLGLIIHADFILGLPGETKQSIRNTIDFAKSLDCETIQVSI 380

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
                GT FY+  +    +   +      + +  
Sbjct: 381 AHAYPGTEFYEFAEKNGFITNHKMDDDAGHQMAH 414


>gi|312135300|ref|YP_004002638.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
           owensensis OL]
 gi|311775351|gb|ADQ04838.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           owensensis OL]
          Length = 471

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 86/264 (32%), Gaps = 23/264 (8%)

Query: 16  SNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +V+  + C   C YC            +    +  + E++ + Q  G + ++ +
Sbjct: 178 KQGVSAFVNIIYGCNNFCSYC---IVPYVRGRERSRRPEEIIYEIEQLAQ-NGVKEVTLL 233

Query: 75  FFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG- 129
             G    S    L+       +L+ I +   +     +T  ++P  +        R    
Sbjct: 234 --GQNVNSYGKDLVNGITFPKLLEKINEIKGIERIRFVT--SHPKDLSNELIAAMRDLEK 289

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               I L VQS   + L+ + R++   + +  +   +   P ++   D+I   P +T   
Sbjct: 290 VCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDED 349

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSIT 243
           +E  L        D    +  +  +GT   KM       +  +        +  +     
Sbjct: 350 FEDTLDVCKKVEFDSAYTFIYSKRRGTPAEKMPNQVPDNIKHQRFQRLVKLVEEIALKKN 409

Query: 244 SAHGLHAYEISNHSFLGAESLHNL 267
                  YEI      G    +NL
Sbjct: 410 KQMLGKTYEI---LIDGRSKRNNL 430


>gi|330837390|ref|YP_004412031.1| Radical SAM domain-containing protein [Spirochaeta coccoides DSM
           17374]
 gi|329749293|gb|AEC02649.1| Radical SAM domain protein [Spirochaeta coccoides DSM 17374]
          Length = 333

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 83/261 (31%), Gaps = 41/261 (15%)

Query: 28  CVKK-------CPYCD---------------------FNS---HVRRYKVGQENFIQSFL 56
           C  +       C +CD                     F S      RY  G E  + S  
Sbjct: 34  CPNRASDRSGGCVFCDGTGASSVYQRDNEQVFAHGTSFASALCFGPRYAGGMEARLSSVD 93

Query: 57  TEMQWMRQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
            +++  ++    R    + S++    T +      +  + +           VE  +   
Sbjct: 94  EQIERGKKFLERRYNARLFSLYLQAWTNTWGSHDEMEAVWNHALSRGPW---VEFIVSTR 150

Query: 114 PSSVEVNNFQGYRKAG--VNRI--SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           P  V              V ++   +G+QS  + +LR + R H +S  I A+    +   
Sbjct: 151 PDCVGDTVADSLAACSSQVRKVWAEIGLQSANDATLRRMSRGHGSSGFIPAVKRLHSRGI 210

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            +   LI   P +    +E  +        + + ++ L I  GT  Y  ++ G++ + S 
Sbjct: 211 GVCAHLILGYPGERWDDYEKTVSMVNDSGCEAVKIHNLHIPGGTRLYAEYQQGEIAVAST 270

Query: 230 NVAVDLYNLTQSITSAHGLHA 250
              V+          +  +  
Sbjct: 271 MRHVEDVIFVLRRLKSDVMVQ 291


>gi|28209949|ref|NP_780893.1| Fe-S oxidoreductase [Clostridium tetani E88]
 gi|28202384|gb|AAO34830.1| Fe-S oxidoreductase [Clostridium tetani E88]
          Length = 314

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 23/230 (10%)

Query: 32  CPYC------DF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C +C      DF  N H           I++   E++ + +          +F   T + 
Sbjct: 48  CLFCSERGSGDFAGNRHFS---------IKAQFEEIKSVMRKKWKGDKYIAYFQAYTNTY 98

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSL 140
              + +    +       V   V + I   P  ++        +        I LG+Q+ 
Sbjct: 99  APVEILKEKYEEALMQEGV---VGLAIATRPDCLDEEVLNLLSEINKKTYLWIELGLQTT 155

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++  + + R +  +    A+   R+    +    I+ LP +T       ++   +  + 
Sbjct: 156 NDRVAKIINRGYELTVFEKALKELRSRDIDVVVHTIFGLPGETKEDMINTVKYLSNKDIQ 215

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L ++ L + +GT     +++GDL   +E   +D+   + +I     +  
Sbjct: 216 GLKIHLLHLMEGTPLVNTYENGDLKFLTEEEYIDIVCESIAIIRDDIVIH 265


>gi|254832064|ref|ZP_05236719.1| radical SAM protein, family [Listeria monocytogenes 10403S]
          Length = 321

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 4/219 (1%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKIQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+    +  +   +    R+   +I  LPK+T        ++ +   VD + ++ L + K
Sbjct: 173 HDYDCYLEGVRKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKIHLLHLLK 232

Query: 212 GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           GT   + +K GDL   + +  V+L      I     +  
Sbjct: 233 GTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 271


>gi|168042647|ref|XP_001773799.1| RNA polymerase II elongator complex, subunit ELP3/histone
           acetyltransferase [Physcomitrella patens subsp. patens]
 gi|162674914|gb|EDQ61416.1| RNA polymerase II elongator complex, subunit ELP3/histone
           acetyltransferase [Physcomitrella patens subsp. patens]
          Length = 573

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 3/141 (2%)

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P+     L       T++++  +  +  P     ++ +     G  R  +GVQ+  E  
Sbjct: 205 TPRMTWTKLYLTQNMETLNASASLLKQWRPDYCIGSHLRQMLTYGCTRPEIGVQNTYEDV 264

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDH 201
            R   R H  +       LA++   ++  +++  LP   M +     +       +  D 
Sbjct: 265 ARDTNRGHTVATVEDCFRLAKDAGFKIVANMMPNLPNVDMERDMESFREFFENPAFRTDG 324

Query: 202 LSLYQLTIEKGTLFYKMHKDG 222
           L LY   + +GT  Y+++++ 
Sbjct: 325 LKLYLTVVIRGTGLYELYRNY 345


>gi|219852229|ref|YP_002466661.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
 gi|219546488|gb|ACL16938.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
          Length = 444

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 9/232 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ CDF S      V ++  ++    E++ +  L        ++      +L    +  
Sbjct: 215 CPFACDFCSKPVWGDVFRKPPLERVFQEIEEIMALGYD----GLWIADDCFTL----DTG 266

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            +     +     S +  T  +    +  +     ++AG  R+ LG++S  +++LR + +
Sbjct: 267 YLARFCEEMIRRGSPIAWTCLSRVDRLTPDLVDLMKRAGCIRVYLGLESGSDETLRLMKK 326

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
                + + A+HL        +   +   P +T+   E     +LS  +D          
Sbjct: 327 KVTVEQGVRAVHLFSQAGVGTAGFFMVGYPGETVESIEKTFALSLSLPLDEAWFTVPLPL 386

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            GT  ++   D       E      +    +            +  +F G  
Sbjct: 387 PGTPLFERVADPRDWEDWEFSNQVKFVFPSAFDHQWLESRIRQTRETFDGRR 438


>gi|326562493|gb|EGE12810.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis 103P14B1]
 gi|326568692|gb|EGE18763.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis BC7]
 gi|326568869|gb|EGE18939.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis BC8]
          Length = 489

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 72/215 (33%), Gaps = 16/215 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R ++ +      + G      +
Sbjct: 201 CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQ-GVREVNLLGQNVNGYRGEK----D 255

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +  + Y+     V+ + L +QS   
Sbjct: 256 DGSICRFSELLHYVSYIDGIERIRYTTSHPLEFTDDIIEAYQSIDKLVSHLHLPIQSGSN 315

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L  + RNH     +  I   R I P   +S D I   P +T   +   LQ A     D
Sbjct: 316 QVLAAMKRNHTVDVYMNQIAKLRKIRPDLHLSSDFIIGFPGETDEDFLQTLQFAKDLDFD 375

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           H   +  +   GT    +  D  L    + +AV  
Sbjct: 376 HSYSFIYSKRPGTPASDLPDDVSLETKKQRLAVFQ 410


>gi|303249104|ref|ZP_07335345.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489475|gb|EFL49421.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 493

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    H +     +  +       ++    +    + S   F G      E  
Sbjct: 223 CPFRCSFC---LHPQTLTGRKARY-----RPIE---DVLDEVAWSLEHFPGLRTVFFEDD 271

Query: 88  NIALILDGIAKNWT--VSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +              +   +     AN    +  +      +AG  ++ +G +S +  +
Sbjct: 272 TLTADRARCKAFCAAIMRRGLRFEWSANSRADLAPDLLAAMGRAGCGQVCVGFESADPTA 331

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + +   A+        A+    ++    I+  P  T       +  A+  A D    
Sbjct: 332 LTSMKKGLTAARMERFRADAKAAGIKVHGCFIFGFPGDTRESIMATIDFAIKLAPDTAQF 391

Query: 205 YQLTIEKGTLFYKMH 219
           Y + +  GT  Y  +
Sbjct: 392 YPVMVYPGTEAYAEY 406


>gi|296113655|ref|YP_003627593.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moraxella catarrhalis
           RH4]
 gi|295921350|gb|ADG61701.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moraxella catarrhalis
           RH4]
 gi|326559649|gb|EGE10063.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis 7169]
 gi|326560011|gb|EGE10406.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis 46P47B1]
 gi|326566929|gb|EGE17067.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis 12P80B1]
 gi|326572683|gb|EGE22672.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis CO72]
 gi|326575068|gb|EGE24997.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis O35E]
          Length = 489

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 72/215 (33%), Gaps = 16/215 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R ++ +      + G      +
Sbjct: 201 CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQ-GVREVNLLGQNVNGYRGEK----D 255

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +  + Y+     V+ + L +QS   
Sbjct: 256 DGSICRFSELLHYVSYIDGIERIRYTTSHPLEFTDDIIEAYQSIDKLVSHLHLPIQSGSN 315

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L  + RNH     +  I   R I P   +S D I   P +T   +   LQ A     D
Sbjct: 316 QVLAAMKRNHTVDVYMNQIAKLRKIRPDLHLSSDFIIGFPGETDEDFLQTLQFAKDLDFD 375

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           H   +  +   GT    +  D  L    + +AV  
Sbjct: 376 HSYSFIYSKRPGTPASDLPDDVSLETKKQRLAVFQ 410


>gi|309389296|gb|ADO77176.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halanaerobium praevalens
           DSM 2228]
          Length = 443

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 69/223 (30%), Gaps = 17/223 (7%)

Query: 10  NMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           ++  Q  +    ++     C   C YC     +  Y  G+E   +   + ++   +L   
Sbjct: 141 DLPSQRKSEHSAWISIIQGCDNFCTYC-----IVPYVRGRERS-RPLTSIVKEAEKLAAD 194

Query: 69  RSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
                   G    S    +E +     +L  + K   +       + ++P        + 
Sbjct: 195 GVKEITLLGQNVNSYGNDLEKETTFPKLLAELNKVQKLKRIRF--MTSHPRDFSDELLEK 252

Query: 125 YRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALP 180
             +     N I L +QS   + L+ + R +     I  +   R   P   +S D I   P
Sbjct: 253 IAELDKVANHIHLPIQSGSNKVLKQMNRGYTREYYIERVEKIRKEMPHASVSTDFIVGFP 312

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +T   +E  +        D    +  +   GT         D
Sbjct: 313 GETEADFEQTINLVKELNFDMAYTFIYSPRSGTPAASRKDQID 355


>gi|166030856|ref|ZP_02233685.1| hypothetical protein DORFOR_00536 [Dorea formicigenerans ATCC
           27755]
 gi|166029438|gb|EDR48195.1| hypothetical protein DORFOR_00536 [Dorea formicigenerans ATCC
           27755]
          Length = 281

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 73/226 (32%), Gaps = 21/226 (9%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGTPSLIEPQ 87
            KC +CDF           ++F    L E++   ++  P + +       G  P +++  
Sbjct: 30  HKCAFCDFTK---------DDFYIFPLEEIEKKAKMLVPYAKAKRRIFLLGENPFVMDTG 80

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQS 144
            I  I   + +        EI++ A    V   +       RK G+  + +G++S   + 
Sbjct: 81  KILAITGYVERYMP--WIHEISMYARVDDVLRKDERELLVLRKKGICHLHIGIESGNAKV 138

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHL 202
           L+ + +     + I A    +      S  +I  L     +    E   +       + +
Sbjct: 139 LKQMNKGVTPEQGIEACERLQRAGITYSVTVIPGLGGKKMSEEHAEDTAKFLNVIQPERI 198

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +  L I   T  YK +      L             + I     +
Sbjct: 199 WMIGLKIWNDTDLYKQYNQ---GLFVPLDLRSRMMEAKKILENLKM 241


>gi|313888524|ref|ZP_07822191.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845553|gb|EFR32947.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 321

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 58/146 (39%), Gaps = 3/146 (2%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  ++    +         I+I      ++    Q  ++    +   + LG+Q++ E ++
Sbjct: 95  LDDLMRIYDQVVDRDDIRGISIATRCDCLDDEKIQYLKEISKKKTLWLELGMQTVNEDTI 154

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R ++       I+  R+         I+ LP +    +E  +      A   +  +
Sbjct: 155 KLINRGYSHRLFDETINKLRDANILFLIHAIFGLPYEDQRDFEKTINYIKDLAPFGVKFH 214

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L I K +  YK++K+ +  + +++ 
Sbjct: 215 NLYILKDSPIYKLYKNKNFKILTKDE 240


>gi|262041254|ref|ZP_06014465.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330005959|ref|ZP_08305443.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Klebsiella sp. MS 92-3]
 gi|259041370|gb|EEW42430.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328536031|gb|EGF62437.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Klebsiella sp. MS 92-3]
          Length = 478

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 74/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 161 CNKYCTYC---VVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 216

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +    YR     V+ + L VQ
Sbjct: 217 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 272 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 331

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P  +    LY L + I     
Sbjct: 332 VNFDMSYSFIFSARPGTPAADMVD----DVPEADKKQRLYILQERINQQAM 378


>gi|15614935|ref|NP_243238.1| hypothetical protein BH2372 [Bacillus halodurans C-125]
 gi|81786524|sp|Q9KAB7|MIAB_BACHD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|10174992|dbj|BAB06091.1| BH2372 [Bacillus halodurans C-125]
          Length = 538

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E   +     +Q +R L           G    +    +
Sbjct: 250 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRDLARQGYKEITLLGQNVNAY--GK 301

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++A +  G+         ++I       ++P   + +  +   K G  V  I L VQ   
Sbjct: 302 DLADLDYGLGDLMDEIRKIDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQHGN 361

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +      +   P  SF  DLI   P +T  Q+E  L        
Sbjct: 362 SEILKLMARKYTREQYVELAQKIKRAIPNASFTTDLIVGFPNETDEQFEDTLSLVREIEF 421

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D    Y  +  +GT   KM  +  + +  E +A 
Sbjct: 422 DSAFTYIYSPREGTPAAKMKDNVPMEVKRERLAR 455


>gi|331004226|ref|ZP_08327705.1| TIGR01212 family radical SAM protein [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411499|gb|EGG90910.1| TIGR01212 family radical SAM protein [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 298

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 3/140 (2%)

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRF 147
            ++    +       V ++I   P       F         +   I LG+Q++ E + R 
Sbjct: 100 RLISLFKEAIQGDEIVALSIATRPDCFSEEMFDSLESLNKIKPVWIELGLQTVNENTARA 159

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R +   +        +     +   +I  LP +T        +      +D + ++ L
Sbjct: 160 FNRGYTLDDFEKTYDELKKRKIEVIVHMILGLPGETKEDMYATSKYLSKKKIDGIKIHGL 219

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            I KGT   K ++     + 
Sbjct: 220 HILKGTRLAKEYEKHPFKIM 239


>gi|260892512|ref|YP_003238609.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
 gi|260864653|gb|ACX51759.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
          Length = 437

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 24/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG-------- 79
           C   C YC     V   +    +  +     ++  R+      +  +  G          
Sbjct: 158 CRDFCTYC----IVPYVRGPCRS--RPLEAVLKAARRFLQEGFVELVLTGTHLGLYGQDL 211

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGV 137
           TPSL     +  +L+         S++E      P  V  +  +  R+       + + +
Sbjct: 212 TPSLTLAHLVERLLEFPELKRLRLSSIE------PLEVTADLIELMRRDSRFCPHLHIPL 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS +++ LR +GR +  ++    +   R   P ++   D++   P +T   +    +   
Sbjct: 266 QSGDDEILRRMGRRYTTAQYRELVARLREAVPDIAITTDVMVGFPGETEEAFARTERLLR 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
              +  + ++  +   GT   +  
Sbjct: 326 ELELAGMHVFPYSPRPGTPAARFP 349


>gi|20094225|ref|NP_614072.1| Fe-S oxidoreductase family protein [Methanopyrus kandleri AV19]
 gi|19887253|gb|AAM02002.1| Fe-S oxidoreductase family protein [Methanopyrus kandleri AV19]
          Length = 402

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 14/196 (7%)

Query: 35  CDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIEPQ 87
           C F    R +         E+ ++     ++        R ++      G+P    ++P 
Sbjct: 165 CAFCQVTRLFGPKLRHRSVEDVVRWVRRGVERYGHTFA-RFVAPDALAYGSPDGIRLKPD 223

Query: 88  NIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQ 143
            +  +L  +     +          E  P S+   +         +  R+++G QS  E+
Sbjct: 224 RVKRLLRSLRSIEGLEKVFFGSFPAELRPDSIAKGDAIELIAHYADNERVNIGAQSGSER 283

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVDH 201
            L+ + R H   +   A+  A  +  +   D I+ LP +T       ++ A  +      
Sbjct: 284 VLKRIERGHTVEDVEVAVEKALEVGLKPVVDFIFGLPGETEEDQLASVELARWIIKRGGE 343

Query: 202 LSLYQLTIEKGTLFYK 217
           + L+      GT    
Sbjct: 344 VRLHYFMPLPGTPLEN 359


>gi|284048503|ref|YP_003398842.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952724|gb|ADB47527.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 292

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 78/225 (34%), Gaps = 10/225 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C F      + V  E+ I+  L E++          +  IF  G  P L+  
Sbjct: 25  CSHNKCRFCTFYKEAP-FSVSPESEIREDLQEIR-----DSGWKVKRIFLQGADPFLLSY 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  I+D I +      +V      +   +  V   +  ++ G + I  G++S ++  L
Sbjct: 79  DRLKRIMDLIKEYLPWGVSVGGYGRVDSVRNKSVGELKSLKEMGYDMIVFGIESGDDAVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
             + + ++AS+ +  +          S   +Y L      M       +     +   + 
Sbjct: 139 DKMNKGYHASDIVEQLSKMDEAGMHYSVIFLYGLGGHEYGMGHAVKTAEVLNHLSPVRVL 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              L+I   T   +  + G+ V  +E   +            H L
Sbjct: 199 ASGLSIFPDTPLMEEVRRGEFVEATETEKIQELYTFVKTLDIHTL 243


>gi|270339730|ref|ZP_06005839.2| radical SAM protein [Prevotella bergensis DSM 17361]
 gi|270333980|gb|EFA44766.1| radical SAM protein [Prevotella bergensis DSM 17361]
          Length = 315

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 7/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  +    +   ++   +       +             +F   T +  +   +  
Sbjct: 61  CTFCDNRTFSPSFCTKEKTITRQLEDGKAFFAHKYPDMK-YLAYFQSFTNTYAKTDQLKQ 119

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + +       V   V       P  +        +         +  G++S   Q+L  +
Sbjct: 120 MYEEALAVDDVVGVVIG---TRPDCMSNELLDYLEALSHQTFLIVEYGIESANNQTLLRI 176

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H    +   I             +I  LP +   +   +     S  +D L ++QL 
Sbjct: 177 NRGHTFECSRDTIERTHARGILTGGHIILGLPGEDQQESLRQAPIISSLPLDILKIHQLQ 236

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           I +GT   + +      L S    +DL     S+  
Sbjct: 237 IIRGTRLAREYARQPFHLYSVEEYIDLIISYVSLLR 272


>gi|147921089|ref|YP_685100.1| redox-active protein [uncultured methanogenic archaeon RC-I]
 gi|110620496|emb|CAJ35774.1| predicted redox-active protein (CxxC motif) [uncultured
           methanogenic archaeon RC-I]
          Length = 366

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 18/196 (9%)

Query: 28  CVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFGGGTPSL 83
           C   C YC       R      +   ++S     ++   ++L  P + +     G TP  
Sbjct: 149 CPWNCAYC----QTPRLFGHRMRHRSVESICKYDKYYEDKRLVSPNAFAYGS-DGITP-- 201

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
             P  +  +L  ++ N    +      E  P  V  +          N+ + LG QS  +
Sbjct: 202 -NPAAVEKLLKNLSGNIYFGT---FPSEVRPEFVTPDMVSLVTTYCANKELHLGGQSGSD 257

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH- 201
           + L+ + R H A + + A    ++       D I+ LP +        L+   +   +  
Sbjct: 258 RVLKAIHRGHTAEQVVTAARTIKDAGLTPVVDFIFGLPGENKEDQTATLENIRAIIREGG 317

Query: 202 -LSLYQLTIEKGTLFY 216
            +  +      GT   
Sbjct: 318 KIRAHYFLPLPGTELA 333


>gi|294782829|ref|ZP_06748155.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481470|gb|EFG29245.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
          Length = 297

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 78/217 (35%), Gaps = 9/217 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C     + + K      I+   +++   R L   R++  IF   G   ++  
Sbjct: 27  CSHNRCTFCS----MYKDKKFVIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPT 82

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L
Sbjct: 83  DILVQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDEAL 142

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHL 202
           +F+ +   A + +       +    +S  LI  L               +     +  + 
Sbjct: 143 KFIKKGIKAEKVVELSKKIMSAGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYA 202

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           S+  L + +GT  Y + + G          +    L 
Sbjct: 203 SILNLRLYEGTELYDLMQQGKYDYMEGIEVLKEMKLI 239


>gi|170754861|ref|YP_001783193.1| radical SAM family protein [Clostridium botulinum B1 str. Okra]
 gi|169120073|gb|ACA43909.1| radical SAM protein, TIGR01212 family [Clostridium botulinum B1
           str. Okra]
          Length = 310

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 84/241 (34%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I     +++ + +        
Sbjct: 36  CPNRDGKVSKGGCIYCSERGSGDF--------AGDRNFKIHKQFEDIKKIMKEKWSSDKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAG 129
             +F   T +      + ++ +   +  +    V + I   P  ++ +     +   K  
Sbjct: 88  IAYFQAYTNTYAP---VNILREKYEEAMSEEGVVALAIATRPDCLDQDVLNLIEELSKKK 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ +++ + + R +  +    A+   R     +    I+ LP +T      
Sbjct: 145 YIWVELGLQTVNDETAKIINRGYELNVFEKAVKDLRERNIDIVVHSIFGLPGETKEDMIG 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  +  + L + K T   K+++ G+L     +  V+L     ++   + + 
Sbjct: 205 TVKYISKLDIQGVKFHLLHLLKDTPLVKLYESGNLEFLDMDEYVELICEAITLLPPNMVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|115522235|ref|YP_779146.1| RNA modification protein [Rhodopseudomonas palustris BisA53]
 gi|122298059|sp|Q07V68|MIAB_RHOP5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115516182|gb|ABJ04166.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopseudomonas
           palustris BisA53]
          Length = 465

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 16/214 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L +++ +    G R I+ I      + G  P 
Sbjct: 166 CDKFCSFC---VVPYTRGAEMSRPVAKILDDVKRLID-NGVREITLIGQNVNAYHGEGPD 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P  +  +L  +A    V+     T  ++P  V+      +R+    +  + L VQS 
Sbjct: 222 D-RPWTLGALLRHLASVPGVARLRYST--SHPLDVDDELIAAHRELPGLMPFVHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R H+A +    I   R   P +  S D I   P +T   +E  L       
Sbjct: 279 SDAILAAMNRRHSADDYRRVIDRFRQADPSIAFSSDFIVGFPGETDRDFEATLALVTQIG 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
                 ++ +   GT   ++ +     +  + + 
Sbjct: 339 YAGAYSFKYSPRPGTPAAELQEMVAPAVMDQRLE 372


>gi|291085698|ref|ZP_06353781.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citrobacter youngae ATCC
           29220]
 gi|291070181|gb|EFE08290.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citrobacter youngae ATCC
           29220]
          Length = 490

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 173 CNKYCTYC---VVPYTRGEEVSRPADDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 228

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 229 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIVEVYRDTPELVSFLHLPVQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 284 SGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQTMKLIAD 343

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 344 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 390


>gi|20094234|ref|NP_614081.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
 gi|19887265|gb|AAM02011.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 435

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 8/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C     V  +   +  + +     ++ +R+LT   +      GG   +   + 
Sbjct: 174 CPGACTFC----QVPEFFGRRVRW-KPVEAVLEEVRELTRGGARRFAISGGTVTTYGDDE 228

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           ++   +L  +A      +     + A+   +     +  R   +  I LG++S  ++ LR
Sbjct: 229 EDFVELLKRLADLLGRENVSAPDVRADL--LNERLLEAIRDYTIGWIFLGIESGSDRILR 286

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +   A+ LAR +  R++   I   P +T    E   +      +D + +  
Sbjct: 287 AMRKGITVDDVCEAVELARTVGVRVAGSFIVGYPGETEDDLEATEELLTELNLDDVFINL 346

Query: 207 LTIEKGTLFYKMH 219
                GT   ++ 
Sbjct: 347 AEPIPGTELGRLV 359


>gi|229890677|sp|A6T6B5|MIAB_KLEP7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 74/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +    YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 268 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P  +    LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEADKKQRLYILQERINQQAM 374


>gi|169827222|ref|YP_001697380.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
           sphaericus C3-41]
 gi|229890559|sp|B1HR59|MIAB_LYSSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|168991710|gb|ACA39250.1| UPF0004 protein [Lysinibacillus sphaericus C3-41]
          Length = 514

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +  +R+L        +  G    +  +  
Sbjct: 223 CDKFCTYC-----IVPYTRGKERS-RRPEEIIAEVRELAAAGYQEIMLLGQNVNAYGKDF 276

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D +     +         ++P   + +  +   K G  V  I L VQS    
Sbjct: 277 EDIEYRLGDLMDALRKIDIPRIRFTTSHPRDFDDHLIEVLAKRGNLVEHIHLPVQSGSND 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   +   P ++   D+I   P +T  Q+E  L        + 
Sbjct: 337 ILKIMARKYTREHFLTLVEKIKAAIPEVTLTTDIIVGYPNETEEQFEETLSLYREVGFEA 396

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
              Y  +  +GT   KM  +
Sbjct: 397 AFTYIYSPREGTPAAKMVDN 416


>gi|225028525|ref|ZP_03717717.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
 gi|224954168|gb|EEG35377.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
          Length = 450

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +  Y  G+    ++    ++ ++ L        +  G    S  +  
Sbjct: 161 CNQFCSYC-----IIPYTRGRIRS-KNPEEVIEEVKNLAAQGYKEIVLTGIHLSSYGKDL 214

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I +   V     I +    P  +     +   K         L +QS  +++
Sbjct: 215 GTVTLLDVIKRIQQVEDVERIRLGSLEPRIITEEFVKELVKCDKVCPHFHLSLQSGCDET 274

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E   A+++ R  +    ++ D+I     +T  ++E          +  +
Sbjct: 275 LKRMNRKYTTEEYEEALNILRKYYEHPALTTDVIAGFVGETEEEFEKTRAYLEKINLYEM 334

Query: 203 SLYQLTIEKGTLFYKM 218
            +++ ++ +GT   KM
Sbjct: 335 HIFKYSVREGTRAQKM 350


>gi|290510411|ref|ZP_06549781.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Klebsiella sp. 1_1_55]
 gi|289777127|gb|EFD85125.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Klebsiella sp. 1_1_55]
          Length = 478

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 76/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 161 CNKYCTYC---VVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 216

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 217 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 272 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTDDFEKTMKLIAD 331

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E+    LY L + I     
Sbjct: 332 VNFDMSYSFIFSARPGTPAADMVD----DVPEEDKKQRLYILQERINQQAM 378


>gi|152969257|ref|YP_001334366.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150954106|gb|ABR76136.1| hypothetical protein KPN_00686 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 453

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 74/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 136 CNKYCTYC---VVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 191

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +    YR     V+ + L VQ
Sbjct: 192 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQ 246

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 247 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 306

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P  +    LY L + I     
Sbjct: 307 VNFDMSYSFIFSARPGTPAADMVD----DVPEADKKQRLYILQERINQQAM 353


>gi|148381494|ref|YP_001256035.1| radical SAM family protein [Clostridium botulinum A str. ATCC 3502]
 gi|153932700|ref|YP_001385869.1| radical SAM family protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153936949|ref|YP_001389276.1| radical SAM family protein [Clostridium botulinum A str. Hall]
 gi|148290978|emb|CAL85114.1| putative radical SAM superfamily protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928744|gb|ABS34244.1| radical SAM protein, TIGR01212 family [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932863|gb|ABS38362.1| radical SAM protein, TIGR01212 family [Clostridium botulinum A str.
           Hall]
          Length = 310

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 84/241 (34%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I     +++ + +        
Sbjct: 36  CPNRDGKVSKGGCIYCSERGSGDF--------AGDRNFKIHKQFEDIKKIMKEKWSSDKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAG 129
             +F   T +      + ++ +   +  +    V + I   P  ++ +     +   K  
Sbjct: 88  IAYFQAYTNTYAP---VNILREKYEEAMSEEGVVALAIATRPDCLDQDVLNLIEELSKKI 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ +++ + + R +  +    A+   R     +    I+ LP +T      
Sbjct: 145 YIWVELGLQTVNDETSKIINRGYKLNVFEKAVKDLRERNIDIVVHSIFGLPGETKEDMVG 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  +  + L + K T   K+++ G+L     +  V+L     ++   + + 
Sbjct: 205 TVKYISKLDIQGVKFHLLHLLKDTPLVKLYESGNLEFLDMDEYVELICEAITLLPPNMVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|39933525|ref|NP_945801.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Rhodopseudomonas palustris CGA009]
 gi|81564244|sp|Q6NCM4|MIAB_RHOPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|39647371|emb|CAE25892.1| tRNA-i(6)A37 modification enzyme MiaB [Rhodopseudomonas palustris
           CGA009]
          Length = 463

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 20/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + + + +++ + +  G R ++ I      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGAEMSRPVAAIVEDVKRLAE-NGVREVTLIGQNVNAYHGDGP- 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
               +    +   + +   +   V +     +P+ V  +    +R     +  + L VQS
Sbjct: 221 ---DRLAWSLGRLVRRLAEIPGIVRLRYSTSHPNDVNDDLLAAHRDLPALMPFVHLPVQS 277

Query: 140 LEEQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             ++ L  + R H A +    I    LA       S D I   P +T   +   L     
Sbjct: 278 GSDRILAAMNRKHTADDYRRVIDRFRLASEAIA-FSSDFIVGFPGETERDFSATLALVAQ 336

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD 221
                   ++ +   GT    M + 
Sbjct: 337 IGYAGAYSFKYSPRPGTPAADMAEM 361


>gi|239927883|ref|ZP_04684836.1| anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
           elongator protein [Streptomyces ghanaensis ATCC 14672]
          Length = 504

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C       +  V +++  +S    +  M +L     +  I F     +L    
Sbjct: 241 CPFKCSFC------FKQAVDKKSMYRSPEDVVGEMTELKERWGVKEIMFYDDVFTL---- 290

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +           V          V     +    AG  R+  G++  + + L  
Sbjct: 291 HRGRVREICGLIGETGLKVRWEAPTRVDLVPEPLLEAMAGAGCVRLRFGIEHGDSEILER 350

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+  A     +     I     +T  Q+   +  A    +D+ S Y  
Sbjct: 351 MRKESDIQKIEKAVTSAHEAGIKGFGYFIVGWLGETREQFRRTVDLACRLPLDYASFYTA 410

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 411 TPLPGTPLH 419


>gi|182680305|ref|YP_001834451.1| MiaB-like tRNA modifying enzyme [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636188|gb|ACB96962.1| MiaB-like tRNA modifying enzyme [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 435

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 27/206 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +     G    +      +   R L     +  +  G    S     
Sbjct: 151 CDHRCSFC-----IIPQGRGSSRSVP-LDDAIAMARDLAARGFLEIVLTGVDLTSYGSDL 204

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANP----SSVEVNNFQGYRKAGVNRISL 135
                    +  IL  +     +  +    IEA+P       E           +  + L
Sbjct: 205 PDVPRLGDLVRRILREVPSLPRLRLSSIDCIEADPVLVRCFAEEERL-------MPSLHL 257

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +Q+  +  L+ + R H  ++AI      R + P +  S DLI   P +T  Q+   L  
Sbjct: 258 SLQAGSDLILKRMQRRHGRTDAIRFCAELRRLRPDIAFSADLIAGFPTETEAQFTDTLDL 317

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
             +  +  L ++  +   GT   +M 
Sbjct: 318 VDACGLTSLHVFPFSARPGTPAARMP 343


>gi|83648010|ref|YP_436445.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Hahella
           chejuensis KCTC 2396]
 gi|123531267|sp|Q2SBF4|MIAB_HAHCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83636053|gb|ABC32020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hahella chejuensis KCTC
           2396]
          Length = 446

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 75/242 (30%), Gaps = 17/242 (7%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    S     +V     C K   YC F              +   + E+  +    G
Sbjct: 137 DRLPMPSSEGASAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPVDDVIAEIAHLAGQ-G 192

Query: 68  PRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNF 122
            R +     ++    G        +   + + I    +V     I     +P     +  
Sbjct: 193 VREVNLLGQNVNAYRGLT---HDGDYMDLAELITYVASVDGIDRIRYTTSHPVEFSDSLI 249

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
             Y      V+ + L VQS  ++ L  + R H  +E    +   + I P +S   D I  
Sbjct: 250 DVYASVPKLVSHLHLPVQSGSDRILNLMKRGHTVAEYTDKLRRLQEIRPDISLSSDFIVG 309

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T   +E  +        DH   +  +   GT    +  +       + +A+    +
Sbjct: 310 FPGETDADFEETMNLINEIGFDHSFSFVYSARPGTPAANLEDNVSEEAKKQRLAILQQRI 369

Query: 239 TQ 240
            Q
Sbjct: 370 LQ 371


>gi|218530899|ref|YP_002421715.1| MiaB-like tRNA modifying enzyme [Methylobacterium chloromethanicum
           CM4]
 gi|218523202|gb|ACK83787.1| MiaB-like tRNA modifying enzyme [Methylobacterium chloromethanicum
           CM4]
          Length = 410

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 70/199 (35%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V     +      ++   +      +    +G    S + 
Sbjct: 139 CDHRCTFCVIPFG-RGNSRSVPVAEAVAQVRRIVEHGGREVVLTGVDLTAYGRDLDSDLS 197

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +   IL  +     +  +   ++EA     + +    + +    +  + L +Q+ ++
Sbjct: 198 LGRLVRTILAEVPDLARLRLSSIDSVEA-----DADLIAAFAEEPRLMPHVHLSLQAGDD 252

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H+ ++AI      R++        DLI   P +T  Q+   L   +   + 
Sbjct: 253 LILKRMKRRHSRADAIRLCETLRDLRPGLVFGADLIAGFPTETEAQFARSLDLVVECGLT 312

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           HL ++  +    T   +M 
Sbjct: 313 HLHVFPYSPRPDTPAARMP 331


>gi|253573611|ref|ZP_04850954.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251847139|gb|EES75144.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 532

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 76/239 (31%), Gaps = 21/239 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R K              +  RQ     ++   ++   G   + I 
Sbjct: 244 CDKFCTYC--IVPFTRGKERSRRPEDVIAEVRELARQGYKEITLLGQNVNAYGKDFTDIN 301

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
               A ++D I +   +         ++P   +        K G  V  I L VQS   +
Sbjct: 302 -YTFANLMDDIRQ---IDIPRVRFTTSHPRDFDDALIDVLAKGGNLVEHIHLPVQSGSSE 357

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   +   P +    D+I   P +T  Q+E  L        D 
Sbjct: 358 VLKKMSRKYTREHYLELVRKIKAKIPNVVLTTDIIVGFPGETEEQFEETLSLVREVGYDS 417

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
              +  +  +GT    M    +  +P E     L  L  ++           SN +  G
Sbjct: 418 AYTFIYSPREGTPAAVM----EDTVPMEVKKARLMKLNDTLNEFS-----RNSNEALRG 467


>gi|329891144|ref|ZP_08269487.1| hemN-like family protein [Brevundimonas diminuta ATCC 11568]
 gi|328846445|gb|EGF96009.1| hemN-like family protein [Brevundimonas diminuta ATCC 11568]
          Length = 96

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 3/97 (3%)

Query: 299 KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIEC 358
           +    ++  V   G    E+E L ++   +E +++GLR  EG+S+   + L G +     
Sbjct: 3   RRIGDYVAGVAA-GSPWAEREVLEAQDADEERVLLGLRTVEGVSLSLLQRL-GLSAVEGR 60

Query: 359 ERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
             +L   GF+  ++  R+  T  G  +LD+V+ +L V
Sbjct: 61  LADLLTDGFLS-LKDGRVAATATGRPLLDAVLKSLLV 96


>gi|213027953|ref|ZP_03342400.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 111

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 9/116 (7%)

Query: 283 HSRVKVGSHRVAISIE-KHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGI 341
           H +V     R+  + + +HP  +++     G  +  +  +S + +  EF M   RL E  
Sbjct: 1   HGKVTFPDGRILRTTKTRHPRGYMQ-----GRYLESQRDVSDDDKPFEFFMNRFRLLERA 55

Query: 342 SVKDWEMLAGRNLDI--ECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
              ++    G    +  +       QG++   +    + T+ G   L+S++     
Sbjct: 56  PRAEFVDYTGLTEAVIRQPIDEAIAQGYLTECE-QYWQITRHGKLFLNSLLELFLA 110


>gi|134046659|ref|YP_001098144.1| radical SAM domain-containing protein [Methanococcus maripaludis
           C5]
 gi|132664284|gb|ABO35930.1| Radical SAM domain protein [Methanococcus maripaludis C5]
          Length = 369

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 70/199 (35%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFGGGTP 81
           C   C +C     F  ++R         I+S +  ++ M  +    P + S     G  P
Sbjct: 144 CPYNCRFCQTPQIFGKNIRHRS------IESIVKIVKTMGDIRFVTPNAFSYGSKTGTKP 197

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSL 140
           ++   + +  ++  + +            E  P  V         K   NR I  G QS 
Sbjct: 198 NI---EKLEKLMKHLFEIKKRLFFGTFPSEVRPEFVTSETLDLINKYCDNRYIHFGAQSG 254

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM--ELQRALSYA 198
            ++ L+ + R H  S+ I A+  ++        D I+  P +T  Q +   +L + +   
Sbjct: 255 SDEVLKHIRRGHTVSDVINAVETSKKCDLIPKVDFIFGFPNETEIQRKESIDLMKYIIKK 314

Query: 199 VDHLSLYQLTIEKGTLFYK 217
              +  +      GT F  
Sbjct: 315 NGKVHAHYFMSLCGTYFEN 333


>gi|257455516|ref|ZP_05620748.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Enhydrobacter aerosaccus
           SK60]
 gi|257447085|gb|EEV22096.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Enhydrobacter aerosaccus
           SK60]
          Length = 488

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 16/204 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  +    G R ++ +      + G       
Sbjct: 200 CSKYCSFCVVPYTRGEEISRPLDDVLAEIDSLASQ-GVREVTLLGQNVNGYRGEK----H 254

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +     V     I     +P     +  + Y K    V+ + L VQS   
Sbjct: 255 DGTICRFSELLHYVAHVDGIERIRYTTSHPLEFSDDIIEAYAKIPKLVSHLHLPVQSGSN 314

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + RNH     I  I    A      +S D I   P +T   ++  L  A     D
Sbjct: 315 AILAAMKRNHTIDIYIEQIRKLRAVRPDMYLSSDFIIGFPNETDKDFQDTLNLAKDLDFD 374

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL 224
           H   +  +   GT    +  + D+
Sbjct: 375 HSYSFIYSKRPGTPASDLPDNIDI 398


>gi|149918077|ref|ZP_01906570.1| radical SAM domain protein [Plesiocystis pacifica SIR-1]
 gi|149821082|gb|EDM80488.1| radical SAM domain protein [Plesiocystis pacifica SIR-1]
          Length = 410

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 13/228 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--FGGGTPSLIE 85
           C  +C +C  +    +    Q +       E++   +  G R I+ +   F  G P+   
Sbjct: 152 CPFRCSFC-QHREAGQSVPRQRSESGRIGREIELFVER-GVREIAVLDPVFNSGGPT--G 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +    +L    +   V     ++++  P  V+ +            +  G+Q+ E +  
Sbjct: 208 ARRSTRLL---RRFSDVGYRGRLSLQCRPEHVDDDFIDACAALD-TCLEFGLQTTERREW 263

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R +      A +   R+        LI+ LP+QT+  +E  L   L   V  +  +
Sbjct: 264 KPIQRGNKLETVDATLSACRDKGVDHQVSLIFGLPEQTVESFERSLAWCLEREVPVIKAF 323

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT---QSITSAHGLHA 250
            L + +GT   +      L   +  + +   + T   +       L  
Sbjct: 324 PLMLLRGTELERTRSRWSLRETTTPMPIVCGSSTFDERDWLRMAQLSQ 371


>gi|71909772|ref|YP_287359.1| radical SAM family protein [Dechloromonas aromatica RCB]
 gi|71849393|gb|AAZ48889.1| Radical SAM [Dechloromonas aromatica RCB]
          Length = 524

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 70/226 (30%), Gaps = 18/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C  KC +C          + +  +       +     L G     +  F     +  ++ 
Sbjct: 188 CPFKCEFC-------LSSLDKTAWAFEQAPFL---AALDGLYQRGARNFKFVDRTFNLKI 237

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQ 143
            +   IL        ++ ++ +  E  P  +     +        GV +  +G+Q+    
Sbjct: 238 DSSLTILQFFLDR--LTPDLFLHFEVIPDHL-PERLKAMIARFPPGVLQFEVGIQTFNPD 294

Query: 144 SLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + + R  +  +    +    N     +  DLI+ LP +T++ +     R  +     +
Sbjct: 295 VQQAISRRQDNDKTCENLAWLVNHSHAHLHTDLIFGLPGETLSSFAAGFDRLYALGPHEI 354

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            L  L   +GT   +      +V  +E            + +    
Sbjct: 355 QLGVLKRLRGTPITRHSAVHGMVYDAEPPYTVKQTAVVDVLTMQRF 400


>gi|313633209|gb|EFS00085.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Listeria seeligeri FSL N1-067]
          Length = 74

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 324 EQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQR---QGFIERVQFSRLRCTQ 380
           +++ +E + +GLR   G+S   ++   G++LD   +  +Q+   +G++E  + + +  T+
Sbjct: 2   KEKMEEEMFLGLRKVSGVSKAGFQRKFGQDLDATFQNAIQKTMAKGWLENNEEN-VALTR 60

Query: 381 RGMTMLDSVIANLA 394
            G  + ++V     
Sbjct: 61  NGRFLGNNVFQEFL 74


>gi|239504221|ref|ZP_04663531.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           AB900]
          Length = 483

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LNFDHSYSFVYSKRPGTP 380


>gi|294791697|ref|ZP_06756845.1| putative radical SAM domain protein [Veillonella sp. 6_1_27]
 gi|294456927|gb|EFG25289.1| putative radical SAM domain protein [Veillonella sp. 6_1_27]
          Length = 453

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +NS      + +   I+  L +++ +    G + I  I            Q
Sbjct: 177 CPHKCDFC-YNSSGTHQYINRN--IEDVLRDIKRL----GTKHIMFIDDNFIGNISWTKQ 229

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I     K   ++ N  +T++              ++ G   + +G +S+  +SL  
Sbjct: 230 FLERI-----KPLKLNWNAAVTMKIGQY---PELMDLMKETGCQSLFIGFESISPKSLSS 281

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  N   E    I+        ++   ++ L   T   ++  L   +S  +D ++ + 
Sbjct: 282 VHKMQNNREEFERLINELHKRGIMVNASFVFGLDGDTPETFKNTLDWIISQKIDTITSHI 341

Query: 207 LTIEKGTLFYKMH 219
           +T   GT FYK  
Sbjct: 342 VTPYPGTEFYKRM 354


>gi|114706886|ref|ZP_01439786.1| hypothetical protein FP2506_18759 [Fulvimarina pelagi HTCC2506]
 gi|114537834|gb|EAU40958.1| hypothetical protein FP2506_18759 [Fulvimarina pelagi HTCC2506]
          Length = 505

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 42/283 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +     ++    +      +  +   G   +  + +
Sbjct: 203 CDKFCTFC-----VVPYTRGAE--VSRPFAQIVDEAKALSDAGVREVTLLGQNVNAWDGE 255

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +       +  +L  +A    ++     T  ++P  ++      +R     +  + L VQ
Sbjct: 256 DEAGKPIGLGGLLHRLADIPGIARLRYTT--SHPRDMDAELIAAHRDLLSLMPYLHLPVQ 313

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  +  L+ + R H A + +  +   R   P ++   D I   P +T   +E  ++    
Sbjct: 314 SGSDSILKAMNRRHTAEDYLRVLDTIREARPDIALSGDFIVGFPGETDADFEATMRLVRE 373

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                   ++ +   GT   +M    +                Q++ +    H  E    
Sbjct: 374 VRYASAFTFKYSPRPGTPGAEMDGHIE--------EAVKDTRLQALNALLREHQAEF-AE 424

Query: 257 SFLG--------AESLHNLNYWRYGDY-----IGIGPGAHSRV 286
           S +G            H         Y     +  G GA   +
Sbjct: 425 SLVGKSLSVLIEKPGRHPRQIAGRSPYLQPVVLPEGMGAIGDI 467


>gi|89100706|ref|ZP_01173562.1| YmcB [Bacillus sp. NRRL B-14911]
 gi|89084581|gb|EAR63726.1| YmcB [Bacillus sp. NRRL B-14911]
          Length = 514

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 72/201 (35%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C K C YC     +  Y  G+E   +     +Q +RQL           G      G   
Sbjct: 224 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRQLAAQGYQEITLLGQNVNAYGKDF 277

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + ++   +  ++D I K   +         ++P   + +  +   K G  +  I L VQS
Sbjct: 278 TDLQ-YGLGDLMDEIRK---IDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLEHIHLPVQS 333

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
                L+ + R +   + +  +   R   P    + D+I   P +T  Q+E  L      
Sbjct: 334 GSTDVLKIMARKYTREQYLELVRKIRAAIPNATFTTDIIVGYPNETDEQFEETLSLYKEV 393

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             +    +  +  +GT   KM
Sbjct: 394 GYESAYTFIYSPREGTPAAKM 414


>gi|307265878|ref|ZP_07547428.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919153|gb|EFN49377.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 562

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 87/269 (32%), Gaps = 32/269 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   S +      +   ++    +++W   +     I  +       +    +
Sbjct: 181 CPFKCAYC--LSSIDNKLRYES--LEKVERDLKWF--VDKNVKILKLIDRSFNSNRKRAR 234

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLR 146
            I  I+        +  +     E NP  V+    +  +      +  +GVQ+  + SL+
Sbjct: 235 EILNIMK------KIGGDTVFHCEVNPELVDEEFIEELKGLEKRIQFEVGVQTTNKNSLK 288

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R     +A+  I L R    ++  DLI  LP+ +   +        +   D + L  
Sbjct: 289 KISRITAVEKALRGIKLLREAGIKLHVDLIAGLPEDSFGTFSKAFDDVYNLKPDEIQLGF 348

Query: 207 LTIEKGTLFYKMHKDGDLVL---PSENVAVDLYNLTQS--ITSAHG--LHAYEISNHSFL 259
           L + KGT   +   +  +V    P   V        Q   I        + Y  S     
Sbjct: 349 LKVLKGTPLMRKVGEFKIVYDSKPPYEVLYTKDISYQELVILKGIAFLFNKYYNSGKFKK 408

Query: 260 GAESLHN------------LNYWRYGDYI 276
             E L N              YW+  + +
Sbjct: 409 TLEYLENKFERPFDFYLEFYKYWKENELL 437


>gi|238916920|ref|YP_002930437.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
 gi|238872280|gb|ACR71990.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
          Length = 473

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 10/229 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    +VR  ++ +E      +   + ++       +          +L  P 
Sbjct: 190 CNNFCTYC-IVPYVRGREISREP-KDIIMEIERLVKDGVKEVMLLGQNVDSYGKTLDNPV 247

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A +L  I K   +       +  +P  +E    +  R +    N I   +QS   + L
Sbjct: 248 SFAQLLREIDKIEGLERIRF--MTPHPKDIEEETLEVIRDSKKICNHIHFPLQSGSSRLL 305

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +     +  + + R I P +S   D+I   P +T   +E  +        D  S
Sbjct: 306 KLMNRKYTKEHYLEQVEMIRRILPDVSITTDIIVGFPGETEEDFEDTIDVVKKAKFD--S 363

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            Y     K T       +  +         +    T +  S   +  YE
Sbjct: 364 AYTFIYSKRTGTPAARMENQVPEDVVKDRFNRLLATVNEVSHEHIRRYE 412


>gi|217967140|ref|YP_002352646.1| radical SAM protein [Dictyoglomus turgidum DSM 6724]
 gi|217336239|gb|ACK42032.1| Radical SAM domain protein [Dictyoglomus turgidum DSM 6724]
          Length = 405

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 16/203 (7%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMR-----QLTGPRSISSIFFGGGTPS--L 83
           CPY C F    R +     +  +S    +  ++      L   R I+   F  G+ +   
Sbjct: 162 CPYGCYFCQTPRIFGGVMRH--RSTEKILDIVKIMNKLNLKDIRFITPNAFAYGSLTGKD 219

Query: 84  IEPQNIALILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVN-RISLGVQS 139
           +  + +  +L GI         +       E  P  V     +  +    N  + +G QS
Sbjct: 220 VNLRRLEELLYGIRNIIGDKGRIFFGSFPSEVRPEHVREEILELLKTYADNDNLVIGAQS 279

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             ++ L    R H   +   A+ L      + + D I+ LP +     E  L+       
Sbjct: 280 GSQRILDLAHRGHTVEDVYRAVSLTLRYGLKANVDFIFGLPYEEERDIEETLKFIEELVK 339

Query: 200 DHLSLYQLTIE--KGTLFYKMHK 220
               ++  T     GT F K   
Sbjct: 340 MGARVHAHTFMPLPGTPFAKFPP 362


>gi|206578177|ref|YP_002239691.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Klebsiella pneumoniae
           342]
 gi|288936533|ref|YP_003440592.1| RNA modification enzyme, MiaB family [Klebsiella variicola At-22]
 gi|229890612|sp|B5XZQ0|MIAB_KLEP3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206567235|gb|ACI09011.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Klebsiella pneumoniae
           342]
 gi|288891242|gb|ADC59560.1| RNA modification enzyme, MiaB family [Klebsiella variicola At-22]
          Length = 474

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 76/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 268 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTDDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E+    LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEDKKQRLYILQERINQQAM 374


>gi|150007983|ref|YP_001302726.1| Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
 gi|149936407|gb|ABR43104.1| Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
          Length = 485

 Score = 69.6 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +  + +
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFTANKKR 274

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +I  +L     N  +       +      +++      +KAG   I  G++S  +Q L
Sbjct: 275 VLDICRLLVEKKLNKRLKWLCNARV-----DLDLETMLAMKKAGCRLIIPGIESGSQQIL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +          +  A+     +    +     +T    E  L+ AL    D    +
Sbjct: 330 DNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFF 389

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L    GT  Y+  ++ + +               ++ S   L A E+ +       +  
Sbjct: 390 PLIPYPGTEAYQWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFC-----NRA 444

Query: 266 NLNYWRYGDYI 276
              Y+    YI
Sbjct: 445 RKKYYLRASYI 455


>gi|146310845|ref|YP_001175919.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter sp. 638]
 gi|229890545|sp|A4W838|MIAB_ENT38 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145317721|gb|ABP59868.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter sp. 638]
          Length = 474

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 84/252 (33%), Gaps = 18/252 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K C YC     V  Y  G+E  +     ++ + 
Sbjct: 133 IEKFDRLPEPRADGP-SAFVSIMEGCNKYCTYC-----VVPYTRGEE--VSRPCDDILFE 184

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-----IEANPSSV 117
                 + +  +   G   +    +N    +   A+   + + ++         ++P   
Sbjct: 185 VAQLAAQGVREVNLLGQNVNAWRGENYDGSIGTFAELLRLVAAIDGIDRVRFTTSHPIEF 244

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSF 173
             +    YR     V+ + L VQ   ++ L  +GR H   E  A I   R   P   +S 
Sbjct: 245 TDDIIDVYRDTPELVSFLHLPVQCGSDRVLNLMGRTHTVLEYKAIIRKLREARPDIQISS 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P +T   +E  ++       D    +  +   GT    M  D       + + +
Sbjct: 305 DFIVGFPGETTDDFERTMKLIGEINFDVSFSFIFSARPGTPAADMVDDVPEEEKKQRLYI 364

Query: 234 DLYNLTQSITSA 245
               + Q +T+ 
Sbjct: 365 LQERINQQVTAW 376


>gi|110798915|ref|YP_697246.1| radical SAM family protein [Clostridium perfringens ATCC 13124]
 gi|110802237|ref|YP_699810.1| radical SAM family protein [Clostridium perfringens SM101]
 gi|168205820|ref|ZP_02631825.1| radical SAM protein, TIGR01212 family [Clostridium perfringens E
           str. JGS1987]
 gi|168209798|ref|ZP_02635423.1| radical SAM protein, TIGR01212 family [Clostridium perfringens B
           str. ATCC 3626]
 gi|168213484|ref|ZP_02639109.1| radical SAM protein, TIGR01212 family [Clostridium perfringens CPE
           str. F4969]
 gi|168217322|ref|ZP_02642947.1| radical SAM protein, TIGR01212 family [Clostridium perfringens NCTC
           8239]
 gi|169343337|ref|ZP_02864347.1| radical SAM protein, TIGR01212 family [Clostridium perfringens C
           str. JGS1495]
 gi|182624274|ref|ZP_02952059.1| radical SAM protein, TIGR01212 family [Clostridium perfringens D
           str. JGS1721]
 gi|110673562|gb|ABG82549.1| radical SAM protein, TIGR01212 family [Clostridium perfringens ATCC
           13124]
 gi|110682738|gb|ABG86108.1| radical SAM protein, TIGR01212 family [Clostridium perfringens
           SM101]
 gi|169298635|gb|EDS80716.1| radical SAM protein, TIGR01212 family [Clostridium perfringens C
           str. JGS1495]
 gi|170662698|gb|EDT15381.1| radical SAM protein, TIGR01212 family [Clostridium perfringens E
           str. JGS1987]
 gi|170712056|gb|EDT24238.1| radical SAM protein, TIGR01212 family [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715019|gb|EDT27201.1| radical SAM protein, TIGR01212 family [Clostridium perfringens CPE
           str. F4969]
 gi|177910492|gb|EDT72865.1| radical SAM protein, TIGR01212 family [Clostridium perfringens D
           str. JGS1721]
 gi|182380601|gb|EDT78080.1| radical SAM protein, TIGR01212 family [Clostridium perfringens NCTC
           8239]
          Length = 311

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C +C   S       GQ    I +    ++ M            +F  
Sbjct: 38  CPNRDGKVAKGGCTFCS--SKGSGDYAGQRTLSIGTQFDNVKEMMNKKWKEGKYIAYFQA 95

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISL 135
            T +    + +        +       V + I   P  +         +        + L
Sbjct: 96  YTNTYAPVEELRR---KYEEAINKEGVVALAIGTRPDCINEEVLDLLEEMNKKVYTWVEL 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++ + + R   R ++      A+   ++         I+ LP ++  Q    +    
Sbjct: 153 GLQTIHDDTARSFNRGYDLEVFDKAMEGLKSRGIDTVVHCIFGLPGESKEQMLETVDYVS 212

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                 + L+ L + +GT   K +++G L   ++   VDL     S    + +  
Sbjct: 213 RCGAQGIKLHLLHLMEGTRMVKDYEEGRLKFLTQEEYVDLICTAISRIPQNMVIH 267


>gi|15896484|ref|NP_349833.1| hypothetical protein CA_C3238 [Clostridium acetobutylicum ATCC 824]
 gi|15026311|gb|AAK81173.1|AE007819_9 Ucharacterized Fe-S oxidoreductase [Clostridium acetobutylicum ATCC
           824]
          Length = 324

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           I ++ +  ++  +    V + I   P  +        ++        + LG+Q+  ++  
Sbjct: 112 IKVLREKYSEAISKDGVVGLAIATRPDCLSEEVLDLIQEFSKRIYVWVELGLQTANDKVA 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R ++      A+   R     +    I+ LP +        +       V  + ++
Sbjct: 172 KVINRGYDTIVFDDAVKKLRERKIDVVVHTIFGLPGEKPKDMLSTIDYVAHKEVQGIKIH 231

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + +GT   +++ +G L   SE   V+      ++   + +  
Sbjct: 232 LLHLMRGTPLVELYNNGQLTFMSEEEYVETVCRAITMLPQNIVIH 276


>gi|167037376|ref|YP_001664954.1| radical SAM domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040044|ref|YP_001663029.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
 gi|256752913|ref|ZP_05493747.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914128|ref|ZP_07131444.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307724636|ref|YP_003904387.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|320115790|ref|YP_004185949.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166854284|gb|ABY92693.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|166856210|gb|ABY94618.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256748210|gb|EEU61280.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889063|gb|EFK84209.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307581697|gb|ADN55096.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
 gi|319928881|gb|ADV79566.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 562

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 48/277 (17%)

Query: 28  CVKKCPYC----DFNS----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  KC YC    D N      + + +   + F+   +  ++ + +               
Sbjct: 181 CPFKCAYCLSSID-NKLRYESLEKVEGDLKWFVDKNVKILKLIDRSFNSNRKR------- 232

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQ 138
                  + I  I+        +  +     E NP  V+    +  +      +  +GVQ
Sbjct: 233 ------AREILNIMK------KIGGDTVFHCEVNPELVDKEFIEELKGLEKRIQFEVGVQ 280

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  + SL+ + R     +A+  I L R    ++  DLI  LP+ +   +        +  
Sbjct: 281 TTNKNSLKKISRITAVEKALRGIKLLREAGIKLHVDLIAGLPEDSFETFSKAFDDVYNLK 340

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL---VLPSENVAVDLYNLTQS--ITSAHGL--HAY 251
            D + L  L + KGT   +  ++  +     P   +        Q   I        + Y
Sbjct: 341 PDEIQLGFLKVLKGTPLMRKVEEFKIVYDNKPPYEILYTKDVSYQELVILKGIAFLLNKY 400

Query: 252 EISNHSFLGAESLHN------------LNYWRYGDYI 276
             S       E L N              YW+  + +
Sbjct: 401 YNSGKFKKTLEYLENKFERPFDFYLEFYKYWKENELL 437


>gi|310641636|ref|YP_003946394.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus polymyxa
           SC2]
 gi|309246586|gb|ADO56153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus polymyxa
           SC2]
          Length = 517

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 67/230 (29%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R K                 RQ     ++                
Sbjct: 228 CDKFCTYC--IVPFTRGKERSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYG------- 278

Query: 88  NIALILDGIAKNWTVSSNVEIT-------IEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               + D   +   +  ++            ++P   + +  +   K G  V  I L VQ
Sbjct: 279 --KDLKDMNYRFGDLMDDMRKINIPRVRFTTSHPRDFDDHLVEVLGKGGNLVEHIHLPVQ 336

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +     +      +   P +S   D+I   P +T  Q+E  L     
Sbjct: 337 SGNTDILKKMNRKYTRERVLELAAKIKAAVPHVSLTTDIIVGFPGETDEQFEDTLSLVRE 396

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              D    +  +  +GT    M  +  + +  E +      + Q+    +
Sbjct: 397 VGYDFAYTFIYSPREGTPAASMEDNVPMSVKKERLRRLNIAVNQNSLRFN 446


>gi|168183634|ref|ZP_02618298.1| radical SAM protein, TIGR01212 family [Clostridium botulinum Bf]
 gi|237797015|ref|YP_002864567.1| radical SAM protein [Clostridium botulinum Ba4 str. 657]
 gi|182673166|gb|EDT85127.1| radical SAM protein, TIGR01212 family [Clostridium botulinum Bf]
 gi|229264000|gb|ACQ55033.1| radical SAM protein, TIGR01212 family [Clostridium botulinum Ba4
           str. 657]
          Length = 310

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 85/241 (35%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I     +++ + +        
Sbjct: 36  CPNRDGKVSKGGCIYCSERGSGDF--------AGDRNFKIHKQFEDIKKIMKEKWSSDKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAG 129
             +F   T +      + ++ +   +  +    V + I   P  ++ +     +   K  
Sbjct: 88  IAYFQAYTNTYAP---VNILREKYEEAISEEGVVALAIATRPDCLDQDVLNLIEELSKKI 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ +++ + + R +  +    A+   R     +    I+ LP +T      
Sbjct: 145 YIWVELGLQTVNDETAKIINRGYKLNVFEKAVKDLRERNIDIVVHSIFGLPGETKEDMIG 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  +  + L + K T   K+++ G+L     +  V+L +   ++   + + 
Sbjct: 205 TVKYISKLDIQGVKFHLLHLLKDTPLVKLYESGNLEFLDMDEYVELISEAITLLPPNMVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|126658288|ref|ZP_01729438.1| tRNA-i(6)A37 modification enzyme MiaB [Cyanothece sp. CCY0110]
 gi|126620437|gb|EAZ91156.1| tRNA-i(6)A37 modification enzyme MiaB [Cyanothece sp. CCY0110]
          Length = 430

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    ++   EM+ + +  G + I+ +      +G   P 
Sbjct: 141 CNERCSYC---VVPNVRGVEQSRTPEAIYQEMELLGKQ-GYKEITLLGQNIDAYGRDLPG 196

Query: 83  LIE-PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           + E  ++   + D + +   +S    +     +P        +   +         +  Q
Sbjct: 197 VTETGRHQHTLTDLLYQVHDISGIERLRFATSHPRYFTERLIKACHELPKVCEHFHIPFQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R   P   +S D I   P +T  Q+E  L+    
Sbjct: 257 SGDNDVLKAMKRGYTHEKYRKIIDKIRQYMPDASISADAIVGFPGETEEQFENTLKLVDD 316

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 317 IGFDQLNTAAYSPRPGTP 334


>gi|229890684|sp|Q5FPF1|MIAB_GLUOX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 475

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 26/208 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF----------G 77
           C K C +C                + S L E + M + +G R I+ +             
Sbjct: 186 CDKFCSFC---VVPYTRGAETSRPVASVLAEARRMAE-SGVREITLLGQNVNAYHGDDGK 241

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG+      + +A +++ +A+   +       + ++P  V+ +    +R     +  + L
Sbjct: 242 GGS------ETLAGLVEQLAQIPGLGRIRY--MTSHPRDVDQSLIDAHRDNPALMPFLHL 293

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L+ + R H A E   ++   R   P   +S D I   P +T   +E  +Q 
Sbjct: 294 PVQSGSDRILKAMNRGHTADEYRESVRKLREARPDLALSSDFIVGHPGETEEDFEATMQL 353

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                      ++ +   GT        
Sbjct: 354 VRDIGFAMAYSFKYSPRPGTPAAGQPMQ 381


>gi|58040437|ref|YP_192401.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Gluconobacter
           oxydans 621H]
 gi|58002851|gb|AAW61745.1| MiaB protein [Gluconobacter oxydans 621H]
          Length = 441

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 26/208 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF----------G 77
           C K C +C                + S L E + M + +G R I+ +             
Sbjct: 152 CDKFCSFC---VVPYTRGAETSRPVASVLAEARRMAE-SGVREITLLGQNVNAYHGDDGK 207

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG+      + +A +++ +A+   +       + ++P  V+ +    +R     +  + L
Sbjct: 208 GGS------ETLAGLVEQLAQIPGLGRIRY--MTSHPRDVDQSLIDAHRDNPALMPFLHL 259

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L+ + R H A E   ++   R   P   +S D I   P +T   +E  +Q 
Sbjct: 260 PVQSGSDRILKAMNRGHTADEYRESVRKLREARPDLALSSDFIVGHPGETEEDFEATMQL 319

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                      ++ +   GT        
Sbjct: 320 VRDIGFAMAYSFKYSPRPGTPAAGQPMQ 347


>gi|298376665|ref|ZP_06986620.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
 gi|298266543|gb|EFI08201.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
          Length = 485

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +  + +
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFTANKKR 274

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +I  +L     N  +       +      +++      +KAG   I  G++S  +Q L
Sbjct: 275 VLDICRLLVEKKLNKRLKWLCNARV-----DLDLETMLAMKKAGCRLIIPGIESGSQQIL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +          +  A+     +    +     +T    E  L+ AL    D    +
Sbjct: 330 DNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFF 389

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L    GT  Y+  ++ + +               ++ S   L A E+ +       +  
Sbjct: 390 PLIPYPGTEAYQWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFC-----NRA 444

Query: 266 NLNYWRYGDYI 276
              Y+    YI
Sbjct: 445 RKKYYLRASYI 455


>gi|167041834|gb|ABZ06575.1| putative Radical SAM superfamily protein [uncultured marine
           microorganism HF4000_097M14]
          Length = 533

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 8/212 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +      +     S  T ++ +++        S        S +   
Sbjct: 222 CPLHCTYCGNTKFIEYDNAYRRLRHSSPRTIIEEIKRTKSKHPYLSTVIFHDD-SFM--A 278

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
               +L+   K W     +   I    P+ V  +       AG+NR+ +G+QS     L 
Sbjct: 279 LRYEVLEEFCKLWKAEIKIPFAIYGLIPTYVREDKIALLVDAGMNRVRMGIQSGSNNILE 338

Query: 147 FLGRNHNASEAIAAIHLAR---NIFPRMSFDLIYALPKQTMTQWEMELQRALSY-AVDHL 202
           F  R         A  +           ++D+I   P +T       +           L
Sbjct: 339 FYKRPTKLYRIKKATEIINKFRKYMIPPAYDIILENPIETPEDTRATVDLIYEMPRPFTL 398

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           ++Y L I   T   K  +     +P  +    
Sbjct: 399 NIYALRIIPNTQLAKDVEKRGFDIPLIDADYH 430


>gi|154494423|ref|ZP_02033743.1| hypothetical protein PARMER_03778 [Parabacteroides merdae ATCC
           43184]
 gi|154085867|gb|EDN84912.1| hypothetical protein PARMER_03778 [Parabacteroides merdae ATCC
           43184]
          Length = 347

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 7/194 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 74  CTYCNNQTFSPEYCHTEKSVTEQLEAGVRFFSRKYPEMK-YLAYFQAYTNTY---DELDS 129

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +       V + +   P  +     + F    +     I  G++S  +++L  +
Sbjct: 130 LTSKYEEALACPGVVGLIVGTRPDCMPDALLDYFSALSQKKFVMIEYGLESTLDRTLTRI 189

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E+  AI             LI  LP ++            +  +  L L+QL 
Sbjct: 190 NRGHTHAESEEAIRRTAARNIYTGAHLILGLPGESREDILHHADILSALPLTTLKLHQLQ 249

Query: 209 IEKGTLFYKMHKDG 222
           + +GT   +   + 
Sbjct: 250 LIRGTRMAREQAEH 263


>gi|89895872|ref|YP_519359.1| hypothetical protein DSY3126 [Desulfitobacterium hafniense Y51]
 gi|89335320|dbj|BAE84915.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 441

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   +    + I   +     + +        ++ I  G     L E
Sbjct: 163 CNQFCTYC----IIPYARGPVRSRIPENAVTEAEKLVAAGYKEIVLTGIHTGSYGEDLGE 218

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A ++  +A+   +      +IE  P                    + + +Q   + 
Sbjct: 219 DWDLARLVKALAQIKGLHRLRLSSIE--PMEFTPELIDVIINYPAVCPHLHIPLQCGSDA 276

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R +   E    I    ++ P ++   D+I   P +T   ++  L+   S     
Sbjct: 277 ILTRMKRPYTVKEFKELIQRLTSLQPGIAITTDVIVGFPGETEQNFQETLETVRSCGFSG 336

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           + ++  +  +GT   K  +     +  E V  
Sbjct: 337 IHVFPYSKREGTPAAKYPEQIPNKIKEERVKA 368


>gi|18311539|ref|NP_563473.1| radical SAM protein family protein [Clostridium perfringens str.
           13]
 gi|18146223|dbj|BAB82263.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 311

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C +C   S       GQ    I +    ++ M            +F  
Sbjct: 38  CPNRDGKVAKGGCTFCS--SKGSGDYAGQRTLSIGTQFDNVKEMMNKKWKEGKYIAYFQA 95

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISL 135
            T +    + +        +       V + I   P  +         +        + L
Sbjct: 96  YTNTYAPVEELRR---KYEEAINKEGVVALAIGTRPDCINEEVLDLLEEMNKKVYTWVEL 152

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++ + + R   R ++      A+   ++         I+ LP ++  Q    +    
Sbjct: 153 GLQTIHDDTARSFNRGYDLEVFDKAMEGLKSRGIDTVVHCIFGLPGESKEQMLETVDYVS 212

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                 + L+ L + +GT   K +++G L   ++   VDL     S    + +  
Sbjct: 213 RCGAQGIKLHLLHLMEGTRMVKDYEEGRLKFLTQEEYVDLICTAISRIPQNMVIH 267


>gi|219670301|ref|YP_002460736.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense
           DCB-2]
 gi|219540561|gb|ACL22300.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense
           DCB-2]
          Length = 439

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 12/212 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   +    + I   +     + +        ++ I  G     L E
Sbjct: 161 CNQFCTYC----IIPYARGPVRSRIPENAVTEAEKLVAAGYKEIVLTGIHTGSYGEDLGE 216

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A ++  +A+   +      +IE  P                    + + +Q   + 
Sbjct: 217 DWDLARLVKALAQIKGLHRLRLSSIE--PMEFTPELIDVIINYPAVCPHLHIPLQCGSDA 274

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R +   E    I    ++ P ++   D+I   P +T   ++  L+   S     
Sbjct: 275 ILTRMKRPYTVKEFKELIQRLTSLQPGIAITTDVIVGFPGETEQNFQETLETVRSCGFSG 334

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           + ++  +  +GT   K  +     +  E V  
Sbjct: 335 IHVFPYSKREGTPAAKYPEQIPNKIKEERVKA 366


>gi|326389821|ref|ZP_08211385.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325994089|gb|EGD52517.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 562

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 87/269 (32%), Gaps = 32/269 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   S +      +   ++    +++W   +     I  +       +    +
Sbjct: 181 CPFKCAYC--LSSIDNKLRYES--LEKVERDLKWF--VDKNVKILKLIDRSFNSNRKRAR 234

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLR 146
            I  I+        +  +     E NP  V+    +  +      +  +GVQ+  + SL+
Sbjct: 235 EILNIMK------KIGGDTVFHCEVNPELVDEEFIEELKGLEKRIQFEVGVQTTNKNSLK 288

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R     +A+  I L R    ++  DLI  LP+ +   +        +   D + L  
Sbjct: 289 KISRITAVEKALRGIKLLREAGIKLHVDLIAGLPEDSFGTFSKAFDDVYNLKPDEIQLGF 348

Query: 207 LTIEKGTLFYKMHKDGDLVL---PSENVAVDLYNLTQS--ITSAHGL--HAYEISNHSFL 259
           L + KGT   +   +  +V    P   V        Q   I        + Y  S     
Sbjct: 349 LKVLKGTPLMRKVGEFKIVYDSKPPYEVLYTKDISYQELVILKGIAFLLNKYYNSGKFKK 408

Query: 260 GAESLHN------------LNYWRYGDYI 276
             E L N              YW+  + +
Sbjct: 409 TLEYLENKFERPFDFYLEFYKYWKENELL 437


>gi|312898798|ref|ZP_07758186.1| radical SAM protein family [Megasphaera micronuciformis F0359]
 gi|310619960|gb|EFQ03532.1| radical SAM protein family [Megasphaera micronuciformis F0359]
          Length = 316

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 20/210 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEP 86
           C +C           G EN   S     +++  ++  GP+  +     +F   T + +  
Sbjct: 43  CAFCG------AIGAGYENLPASVTIEEQLKTNKEHIGPKYKAEKFIAYFQNFTNTYVPV 96

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNR-ISLGVQSLE 141
                 L+       +   V + +   P  +            +K GV+  + LG+Q++ 
Sbjct: 97  DLFREYLEAAC----LPDVVGLAVATRPDCLNRTYLDIMDDVRQKHGVDITVELGLQTVN 152

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            ++L  + R H  +E I ++ + ++   R    +I  LP           +   +     
Sbjct: 153 YKTLEQINRGHGVAEYIDSLMMLKDYDFRNCTHVIIGLPGDDEVDTVETAKIISALPTHE 212

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + L+ L I K T   + +K+G++ L +   
Sbjct: 213 VKLHALYIIKNTRMAQWYKNGEISLITVEE 242


>gi|256840843|ref|ZP_05546351.1| Fe-S oxidoreductase [Parabacteroides sp. D13]
 gi|256738115|gb|EEU51441.1| Fe-S oxidoreductase [Parabacteroides sp. D13]
          Length = 485

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +  + +
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFTANKKR 274

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +I  +L     N  +       +      +++      +KAG   I  G++S  +Q L
Sbjct: 275 VLDICRLLVEKKLNKRLKWLCNARV-----DLDLETMLAMKKAGCRLIIPGIESGSQQIL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +          +  A+     +    +     +T    E  L+ AL    D    +
Sbjct: 330 DNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFF 389

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L    GT  Y+  ++ + +               ++ S   L A E+ +       +  
Sbjct: 390 PLIPYPGTEAYQWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFC-----NRA 444

Query: 266 NLNYWRYGDYI 276
              Y+    YI
Sbjct: 445 RKKYYLRASYI 455


>gi|298242342|ref|ZP_06966149.1| MiaB-like tRNA modifying enzyme [Ktedonobacter racemifer DSM 44963]
 gi|297555396|gb|EFH89260.1| MiaB-like tRNA modifying enzyme [Ktedonobacter racemifer DSM 44963]
          Length = 495

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 27/256 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C  +C YC            +   I S +  +Q   +      + + I  G   P+  E 
Sbjct: 212 CNNRCTYC---IVPYVRGNSRSRTIDSVVEHVQRKARAGYQEIVLTGIHLGDYHPAGDEQ 268

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSL 145
           +++  ++  + +   +      ++E  P    +     ++         L +QS  +  L
Sbjct: 269 KDLGDLIATLLRETDMPRIRVSSLE--PEDFRLEWLDLWQDPRMCRHFHLPMQSGSDNIL 326

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R +N++     I  A+   P   +S D+I   P +T   +E+  Q A         
Sbjct: 327 RRMARRYNSARYREIILTAKQRIPGVAISTDIITGFPGETDEDFELTYQLAQELEFAKTH 386

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG--- 260
           +++ +  +GT   +M      V+  E  A         + + +  H+ +     FLG   
Sbjct: 387 VFRFSARQGTAAARMRGQIKDVVKKERSAR--------LLTLNEEHSRQF-RQQFLGQTV 437

Query: 261 ----AESLHNLNYWRY 272
                +S H   YW  
Sbjct: 438 DVLIEQSKH--GYWEG 451


>gi|294817818|ref|ZP_06776460.1| radical SAM domain-containing protein moeK5 [Streptomyces
           clavuligerus ATCC 27064]
 gi|326446714|ref|ZP_08221448.1| Radical SAM domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294322633|gb|EFG04768.1| radical SAM domain-containing protein moeK5 [Streptomyces
           clavuligerus ATCC 27064]
          Length = 502

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C       +  V +++  ++    +  M +L     +  I F     +L    
Sbjct: 239 CPFKCSFC------FKQAVDKKSMYRTPEDVVGEMTELQKRWGVKEIMFYDDVFTL---- 288

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +  A        V          V     +    AG  R+  G++  + + L  
Sbjct: 289 HRGRVREICALINERGLKVRWEAPTRVDLVPEKLLEAMAGAGCVRLRFGIEHGDPEILAR 348

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+  A     +     I     ++  Q+   L  A    +D+ S Y  
Sbjct: 349 MRKESDIGKIERAVTSAHEAGIKGFGYFIVGWLDESREQFRRTLDLACRIPLDYASFYTA 408

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 409 TPLPGTPLH 417


>gi|192288883|ref|YP_001989488.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Rhodopseudomonas palustris TIE-1]
 gi|229890627|sp|B3QAC6|MIAB_RHOPT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|192282632|gb|ACE99012.1| RNA modification enzyme, MiaB family [Rhodopseudomonas palustris
           TIE-1]
          Length = 463

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 18/204 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + + + +++ + +  G R ++ I      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGAEMSRPVVAIVEDVKRLAE-NGVREVTLIGQNVNAYHGDGP- 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   + +   +   V +     +P+ V+ +    +R     +  + L VQS
Sbjct: 221 ---DGRAWSLGRLVRRLAEIPGIVRLRYSTSHPNDVDDDLLAAHRDLPALMPFVHLPVQS 277

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A +    I   R+    +  S D I   P +T   +   L      
Sbjct: 278 GSDRILAAMNRKHTADDYRRVIDRFRSASETIAFSSDFIVGFPGETERDFSATLALVAQI 337

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKD 221
                  ++ +   GT    M + 
Sbjct: 338 GYAGAYSFKYSPRPGTPAADMVEM 361


>gi|325510642|gb|ADZ22278.1| Ucharacterized Fe-S oxidoreductase [Clostridium acetobutylicum EA
           2018]
          Length = 321

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 60/165 (36%), Gaps = 3/165 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           I ++ +  ++  +    V + I   P  +        ++        + LG+Q+  ++  
Sbjct: 109 IKVLREKYSEAISKDGVVGLAIATRPDCLSEEVLDLIQEFSKRIYVWVELGLQTANDKVA 168

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R ++      A+   R     +    I+ LP +        +       V  + ++
Sbjct: 169 KVINRGYDTIVFDDAVKKLRERKIDVVVHTIFGLPGEKPKDMLSTIDYVAHKEVQGIKIH 228

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + +GT   +++ +G L   SE   V+      ++   + +  
Sbjct: 229 LLHLMRGTPLVELYNNGQLTFMSEEEYVETVCRAITMLPQNIVIH 273


>gi|315497214|ref|YP_004086018.1| RNA modification enzyme, miab family [Asticcacaulis excentricus CB
           48]
 gi|315415226|gb|ADU11867.1| RNA modification enzyme, MiaB family [Asticcacaulis excentricus CB
           48]
          Length = 470

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 14/204 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                + S L E + +    G R I+    ++    G  + 
Sbjct: 184 CDKFCTFC---VVPYTRGAEWSRPVASILEEARSLAS-KGVREITLLGQNVNAYNGREAD 239

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++  +++   +      T  ++P+ +     + + +    +  + L VQS  
Sbjct: 240 GEESTLPRLMQALSEIEGLDRIRYTT--SHPNDMTDELIRAHAENPAVMPYLHLPVQSGS 297

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R H     I  I   +   P ++   D I   P +T   +E  +    +   
Sbjct: 298 DKILRAMNRKHGRQAYIDLIARLKAAVPNIALSGDFIVGFPGETEKDFEDTMDLIRTVGY 357

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
                ++ +   GT    M    D
Sbjct: 358 ASAFSFKYSKRPGTPAAAMPGQVD 381


>gi|297617252|ref|YP_003702411.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145089|gb|ADI01846.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 293

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 79/219 (36%), Gaps = 14/219 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     + + K  +   ++    +++  +   G   +  +F   G    ++   +  
Sbjct: 31  CTFCG----MYKDKKYRVRSLEEIKADIRMAKLYYGD--LQKVFLADGDALAMQTDELLE 84

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IL+ + +     S   + I A P S+        Q  ++AG+    LG+++ +E+ L+ +
Sbjct: 85  ILNYLYRL--FPSLYHVGIYAGPQSILQKTEEELQMLKQAGLTIAYLGIETGDERLLKEI 142

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSLY 205
            +     E + A         ++S  ++  L     ++        +       D L+  
Sbjct: 143 NKGVTYEEMVEAGQKIVRSGIKLSATVLLGLAGPGERSAEHAAATARICNEINPDFLAAL 202

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            L +  GT+ ++  + G   L      ++   +      
Sbjct: 203 TLMVVPGTVLHRRVQQGKFKLLDPFEILEEMRILIEGLE 241


>gi|237740087|ref|ZP_04570568.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422104|gb|EEO37151.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 297

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 78/217 (35%), Gaps = 9/217 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C     + + K      I+    ++   R L   R++  IF   G   ++  
Sbjct: 27  CSHNRCTFCS----MYKDKKFVIKPIEDIKADIDAFRALYKNRAVEKIFLADGDALVVPT 82

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L
Sbjct: 83  DILVQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDEAL 142

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHL 202
           +F+ +   A + +       ++   +S  LI  L               +     +  + 
Sbjct: 143 KFIKKGIKAEKVVELSKKIMSVGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYA 202

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           S+  L + +GT  Y + + G          +    L 
Sbjct: 203 SILNLRLYEGTELYDLMQQGKYDYMEGIEVLKEMKLI 239


>gi|225017533|ref|ZP_03706725.1| hypothetical protein CLOSTMETH_01460 [Clostridium methylpentosum
           DSM 5476]
 gi|224949683|gb|EEG30892.1| hypothetical protein CLOSTMETH_01460 [Clostridium methylpentosum
           DSM 5476]
          Length = 313

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 76/215 (35%), Gaps = 7/215 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC  N+    +     + +     +++       P++    +F   T +      + +
Sbjct: 52  CTYCS-NAGSGDFAGNPNDDLVRQFEQVKTALHQKWPQAKYIGYFQAFTNTYAP---LPV 107

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +       + + V ++I     ++         +        + LG+Q++ +++ + +
Sbjct: 108 LREKYETILALDNVVGLSIATRADALPDEVVDYLAELSQRTYLVVELGLQTIHDETGKRI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +E  A     R     +   +I  LP +T       ++      +  + ++ L 
Sbjct: 168 NRGHSYAEFRAGYQKLRERGIPVCVHIINGLPGETREMMLETVRELAKLELHCIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + KGT     +  G+  L S    V +      + 
Sbjct: 228 LLKGTAMAAEYARGEFELLSLEEYVQIVCDQLELL 262


>gi|326801493|ref|YP_004319312.1| hypothetical protein Sph21_4109 [Sphingobacterium sp. 21]
 gi|326552257|gb|ADZ80642.1| Conserved hypothetical protein CHP01212 [Sphingobacterium sp. 21]
          Length = 323

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 76/236 (32%), Gaps = 16/236 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C YC+ +S             +     ++   +  G      I+F   
Sbjct: 39  CPNRDGSKGFGGCSYCNVDSFTPESARKMPTIREQVEQGIERAIKGYGAEKF-VIYFQPN 97

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISL 135
           T +      +  + D         + V +++   P  ++        ++  +R    + +
Sbjct: 98  TNTYAPVHYLKAMYDEALSIAP-ENVVGLSVGTRPDCIDFEKV-ALLESYTDRFDVDLEM 155

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G++S+   +L  + R  +  E   A++L +N    +    I+  P ++            
Sbjct: 156 GMESIYNDTLNRINRGCSHEELEVALNLVQNSPLDICVHTIFGFPWESKEMMLKYADEIN 215

Query: 196 SYA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +  +  + L+ L I +G++    +K     L S     D       +     +  
Sbjct: 216 RFPQIKFVKLHHLHIVEGSIMGVQYKRKPFPLFSLESYTDFLCEFIPLLRPDIIIQ 271


>gi|307294713|ref|ZP_07574555.1| MiaB-like tRNA modifying enzyme [Sphingobium chlorophenolicum L-1]
 gi|306879187|gb|EFN10405.1| MiaB-like tRNA modifying enzyme [Sphingobium chlorophenolicum L-1]
          Length = 443

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFG-------- 77
           C  +C +C     +  Y  G    + +    +   ++L   G R I              
Sbjct: 167 CDHRCTFC-----IIPYGRGNSRSVPA-GAVIDKAKKLVDAGYREIVLTGVDVTSYGPDL 220

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRIS 134
            G PSL     I  IL G+     +  +   ++E +                   +  + 
Sbjct: 221 PGAPSL--GLLIERILKGVPGLSRLRLSSLDSVEID------ERLFDLLAHEPRMMPHLH 272

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +Q+ ++  L+ + R H+ +EAI  +   +   P +S   D+I   P +    +E  L+
Sbjct: 273 LSLQAGDDMILKRMKRRHSRAEAIRIVERLKAARPDISIGADIIAGFPTEDEAMFENSLR 332

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                A+ H  ++  +   GT   +M +
Sbjct: 333 LVEQCAIVHGHIFPYSPRTGTPAARMPQ 360


>gi|20094428|ref|NP_614275.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
 gi|19887512|gb|AAM02205.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 483

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 73/235 (31%), Gaps = 20/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S        + +  +  ++EM  + +  G   I+ +     T +     
Sbjct: 205 CPVGCDFCA--SSAMHGHKLRMHSAERVVSEMAHVHENYGSDIIAFVD---DTFTY---- 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +          +V     A   +++    +  R+AG + +  GV+S  ++ L  
Sbjct: 256 DRRRVEEICRLIVESGLDVTWGCAARVDTIDRELLELMREAGCSVLFFGVESGSQEVLDN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL----- 202
           +G+     +   A  L R          +  LP +T       ++       D+      
Sbjct: 316 VGKGFTVEQTKKAFQLCREFDIVTVASAVIGLPGETHRSARQTIKFLKEIDPDYAVVSVA 375

Query: 203 ------SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   YQ  +EKG +  K      L+ P            +       +  Y
Sbjct: 376 TPYPGTKFYQEAVEKGLIEEKSWDKYTLMDPVVRTTELSPEEVKKYQKRAMIEFY 430


>gi|296327964|ref|ZP_06870499.1| radical SAM domain protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154920|gb|EFG95702.1| radical SAM domain protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 297

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 78/215 (36%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCSFCS----MYKDKKFIIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALIVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++ +L+F
Sbjct: 85  LIQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDDALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  ++S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYVSI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQEGKYDYMEGIEVLKEMKLV 239


>gi|291612848|ref|YP_003523005.1| radical SAM domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291582960|gb|ADE10618.1| Radical SAM domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 538

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 76/262 (29%), Gaps = 33/262 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD     R YKV    +I      M+ +R   G   +  I F     +     
Sbjct: 210 CPYTCSFCDRTVFERLYKVNSAQYI---YDHMKHLRDRFG---VYHINFYDDLFT----A 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D           ++               Q  ++AG   +S+G++S +   +  
Sbjct: 260 QKKRVFDLCDLLIAKPLGMQFNCAIRTGHTSDEMLQRLKQAGALMVSMGIESADPAMMER 319

Query: 148 LGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               H A   + A+            R     I+ +P +T    +      LS  +D ++
Sbjct: 320 ----HKAGVTLEAVTKTVQQIHAAGLRAKGLFIFGMPGETPETVKTTSDFILSLDLDEMN 375

Query: 204 LYQLTI-------------EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + +              E+G           L                ++ + H    
Sbjct: 376 MTKFSPLYGAPIWDECVSGEEGDFIEDWRLMNCLNFVFLPKGFSSREEMDALYNWHIQRF 435

Query: 251 YEISNHSFLGAESL--HNLNYW 270
           Y   N+    A  L  H  + W
Sbjct: 436 YNSKNYQRTFARRLWQHRWSLW 457


>gi|32034173|ref|ZP_00134395.1| COG0621: 2-methylthioadenine synthetase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208789|ref|YP_001054014.1| hypothetical protein APL_1325 [Actinobacillus pleuropneumoniae L20]
 gi|190150645|ref|YP_001969170.1| hypothetical protein APP7_1376 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263992|ref|ZP_07545593.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|229890417|sp|A3N1X3|MIAB_ACTP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890418|sp|B3GYA4|MIAB_ACTP7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|126097581|gb|ABN74409.1| hypothetical protein APL_1325 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915776|gb|ACE62028.1| hypothetical protein APP7_1376 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306870681|gb|EFN02424.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 475

 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 75/232 (32%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     V         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRVRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R + P +  S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  D       E +A     +       
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAADLPDDISEEEKKERLARLQQRINHQAMQF 375


>gi|308068737|ref|YP_003870342.1| hypothetical protein PPE_01968 [Paenibacillus polymyxa E681]
 gi|305858016|gb|ADM69804.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 517

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 67/230 (29%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R K                 RQ     ++                
Sbjct: 228 CDKFCTYC--IVPFTRGKERSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYG------- 278

Query: 88  NIALILDGIAKNWTVSSNVEIT-------IEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               + D   +   +  ++            ++P   + +  +   K G  V  I L VQ
Sbjct: 279 --KDLKDLNYRFGDLMDDMRKINIPRVRFTTSHPRDFDDHLVEVLGKGGNLVEHIHLPVQ 336

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +     +      +   P +S   D+I   P +T  Q+E  L     
Sbjct: 337 SGNTDILKKMNRKYTRERVLELAAKIKAAVPHVSLTTDIIVGFPGETDEQFEDTLSLVRE 396

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              D    +  +  +GT    M  +  + +  E +      + Q+    +
Sbjct: 397 VGYDFAYTFIYSPREGTPAASMEDNVPMSVKKERLRRLNIAVNQNSLRFN 446


>gi|322418301|ref|YP_004197524.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. M18]
 gi|320124688|gb|ADW12248.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. M18]
          Length = 473

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 107/295 (36%), Gaps = 37/295 (12%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  +C YC     F+    R +  Q  +  ++     +  ++ ++      +        
Sbjct: 206 CPSRCIYCLWPQTFSGRTLRKRSPQNVYEEVRWIKENLPQVKDISFDDDTFTADKQHAI- 264

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                  IA ++  +  +W +++           + +    +  R AG++ + +G +S  
Sbjct: 265 ------AIARLIKPLNVSWVINARA---------NADYETLKELRDAGMHHVVVGYESGN 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           EQ L+ + +    ++AI      + +   +    +  LP +T    +  +  A+   +  
Sbjct: 310 EQILKNIKKGVTKTQAIEFTRNCKKLGITVHGAFVLGLPGETRETIKETIAYAIDLDLTS 369

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +   +   GT FY+M K+   +     +    +           ++  ++SN     A
Sbjct: 370 IQVSLASPYPGTEFYQMAKENGWIASDSFLDATGHQ-------KCVINYPDLSNQEIFDA 422

Query: 262 -ESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWLKMVRKNGHA 314
            E  +N  Y+R   YI     A S    +   +V   + K    +L  +RK   A
Sbjct: 423 VEQFYNKFYFRPR-YI-----ARSIFSMLVDSQVRRKLLKEGAQYLSYMRKRKQA 471


>gi|291287753|ref|YP_003504569.1| RNA modification enzyme, MiaB family [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884913|gb|ADD68613.1| RNA modification enzyme, MiaB family [Denitrovibrio acetiphilus DSM
           12809]
          Length = 435

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 70/192 (36%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C   C YC    +VR  +  +E      + E++++    G R I+ +         +L +
Sbjct: 153 CNNFCSYC-IVPYVRGREKSREQ--SEIIDEIKYLAD-KGAREITLLGQNVNSYGTALTD 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           P +   +LD ++    +     +T  ++P           R        + L +QS    
Sbjct: 209 PVSFPELLDKVSDVEGIKRIRFVT--SHPKDFSNELIDVMRGNDKICEYLHLPLQSGSNA 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +        +  A+ + P +  S D I   P +T   ++  ++       D 
Sbjct: 267 VLQKMNRKYTYDHYKERVLRAKEMIPDLALSSDFIVGFPGETEEDFQSTMKALEEIRYDM 326

Query: 202 LSLYQLTIEKGT 213
           +  +  +   GT
Sbjct: 327 IYAFNYSTRPGT 338


>gi|282901705|ref|ZP_06309621.1| tRNA-i(6)A37 modification enzyme MiaB [Cylindrospermopsis
           raciborskii CS-505]
 gi|281193468|gb|EFA68449.1| tRNA-i(6)A37 modification enzyme MiaB [Cylindrospermopsis
           raciborskii CS-505]
          Length = 447

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          V Q    ++   EM+ + Q  G R I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPEAIREEMEILGQQ-GYREITLLGQNIDAYGRDLPG 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S  E +++    D +     V     I     +P        +   +         +  Q
Sbjct: 213 STAEGRHLHTFTDLLYYVHDVPGIERIRFATSHPRYFTERLIKACAELPKICEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + + L+ + R +   +    I+  R+  P   +S D I   P +T  Q+E  LQ    
Sbjct: 273 SGDNEILKAMSRGYTQEKYRRIINTIRSYMPDASISADAIVGFPGETEIQFENTLQLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DHL+    +   GT 
Sbjct: 333 IGFDHLNTAAYSPRPGTP 350


>gi|226951010|ref|YP_002806101.1| radical SAM protein [Clostridium botulinum A2 str. Kyoto]
 gi|226841992|gb|ACO84658.1| radical SAM protein [Clostridium botulinum A2 str. Kyoto]
          Length = 310

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 84/241 (34%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I     +++ + +        
Sbjct: 36  CPNRDGKVSKGGCIYCSERGSGDF--------AGDRNFKIHKQFEDIKKIMKEKWSSDKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAG 129
             +F   T +      + ++ +   +  +    V + I   P  ++ +     +   K  
Sbjct: 88  IAYFQAYTNTYAP---VNILREKYEEAMSEEGVVALAIATRPDCLDQDVLNLIEELSKKI 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q++ +++ + + R +  +    A+   R     +    I+ LP +T      
Sbjct: 145 YIWVELGLQTVNDETAKIINRGYKLNVFEKAVKDLRERNIDIVVHSIFGLPGETKEDMIG 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  +  + L + K T   K+++ G+L     N  V+L     ++   + + 
Sbjct: 205 TVKYISKLDIQGVKFHLLHLLKDTPLVKLYESGNLEFLDMNEYVELICEAITLLPPNMVV 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|254511318|ref|ZP_05123385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
           bacterium KLH11]
 gi|221535029|gb|EEE38017.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
           bacterium KLH11]
          Length = 439

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 75/240 (31%), Gaps = 32/240 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-------GGGT 80
           C K C +C     V  Y  G E  +      +    Q    R +  I           G 
Sbjct: 159 CDKFCAFC-----VVPYTRGAE--VSRPADRIIREAQDLVERGVREITLLGQNVNAYHGA 211

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGV 137
                P     +   I +   V     I     +P+ ++    + +      +  + L V
Sbjct: 212 ----GPDGDMTLAALIWELNKVDGLERIRFTTSHPNDMDDALIEAHGTCDKLMPYLHLPV 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R+H A   +  I   R   P +  S D I   P++T   ++  L    
Sbjct: 268 QSGSDRVLKRMNRSHTAESYLRLIERIREARPDILMSGDFIVGFPEETDEDFQATLDLVE 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                +   ++ +   GT   +  +           A       Q + +    H  EI +
Sbjct: 328 EVKYGYAYSFKYSTRPGTPAAERPQV---------EAEVADERLQRLQAMITRHQREIQD 378


>gi|226951972|ref|ZP_03822436.1| tRNA-i(6)A37 modification enzyme MiaB [Acinetobacter sp. ATCC
           27244]
 gi|294649236|ref|ZP_06726674.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226837310|gb|EEH69693.1| tRNA-i(6)A37 modification enzyme MiaB [Acinetobacter sp. ATCC
           27244]
 gi|292824903|gb|EFF83668.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 483

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 66/198 (33%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q YR     V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYRDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R + P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLQAMKRNHTIDVYIDKIAKLRKVRPDMHLSSDFIIGFPGETDQHFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|222147351|ref|YP_002548308.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Agrobacterium
           vitis S4]
 gi|221734341|gb|ACM35304.1| miaB protein [Agrobacterium vitis S4]
          Length = 477

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 18/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E Q + + +G R I+ +      + G  P 
Sbjct: 193 CDKFCTFC---VVPYTRGSEVSRPLAQLLGEAQRLVE-SGVREITLLGQNVNAWHGKGP- 247

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQS 139
                    + D + K   +     +     +P  ++    + +R   +    + L VQS
Sbjct: 248 ---DGREMGLGDLLYKLAEIPGLARLRYTTSHPRDMDERLIEAHRDLRMLMPYLHLPVQS 304

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A++ IA +   R   P ++   D I   P +T   +E  ++     
Sbjct: 305 GSDRILKAMNRRHKAADYIALVDRIREARPDIAISGDFIVGFPGETDADFEDTMKLVERI 364

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                  ++ +   GT    M       + +E +A     L + 
Sbjct: 365 GYAQAFSFKYSPRPGTPGADMPDHVAEDVKTERLARLQELLLKQ 408


>gi|262280174|ref|ZP_06057958.1| tRNA-I(6)A37 thiotransferase [Acinetobacter calcoaceticus RUH2202]
 gi|262257952|gb|EEY76686.1| tRNA-I(6)A37 thiotransferase [Acinetobacter calcoaceticus RUH2202]
          Length = 483

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|260557080|ref|ZP_05829297.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           ATCC 19606]
 gi|260409686|gb|EEX02987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           ATCC 19606]
          Length = 483

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|260549787|ref|ZP_05824003.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter sp.
           RUH2624]
 gi|260407037|gb|EEX00514.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter sp.
           RUH2624]
          Length = 483

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|184159545|ref|YP_001847884.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           baumannii ACICU]
 gi|332873010|ref|ZP_08440969.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           6014059]
 gi|229890409|sp|B2HZ55|MIAB_ACIBC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|183211139|gb|ACC58537.1| 2-methylthioadenine synthetase [Acinetobacter baumannii ACICU]
 gi|322509455|gb|ADX04909.1| 2-methylthioadenine synthetase [Acinetobacter baumannii 1656-2]
 gi|323519476|gb|ADX93857.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332738792|gb|EGJ69660.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           6014059]
          Length = 483

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|169794647|ref|YP_001712440.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter
           baumannii AYE]
 gi|213157982|ref|YP_002320780.1| tRNA-i(6)A37 thiotransferase [Acinetobacter baumannii AB0057]
 gi|215482236|ref|YP_002324418.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           AB307-0294]
 gi|301345373|ref|ZP_07226114.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           baumannii AB056]
 gi|301511255|ref|ZP_07236492.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           baumannii AB058]
 gi|301595637|ref|ZP_07240645.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           baumannii AB059]
 gi|332855636|ref|ZP_08435979.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           6013150]
 gi|332868551|ref|ZP_08438217.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           6013113]
 gi|229890407|sp|B7GW55|MIAB_ACIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890408|sp|B7I9D5|MIAB_ACIB5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890411|sp|B0V6R4|MIAB_ACIBY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169147574|emb|CAM85435.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter
           baumannii AYE]
 gi|213057142|gb|ACJ42044.1| tRNA-i(6)A37 thiotransferase [Acinetobacter baumannii AB0057]
 gi|213987152|gb|ACJ57451.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           AB307-0294]
 gi|332727351|gb|EGJ58787.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           6013150]
 gi|332733321|gb|EGJ64514.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
           6013113]
          Length = 483

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|301309927|ref|ZP_07215866.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
 gi|300831501|gb|EFK62132.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
          Length = 485

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +  + +
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFTANKKR 274

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +I  +L     N  +       +      +++      +KAG   I  G++S  +Q L
Sbjct: 275 VLDICRLLVEKKLNKRLKWLCNARV-----DLDLETMLAMKKAGCRLIIPGIESGSQQIL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +          +  A+     +    +     +T    E  L+ AL    D    +
Sbjct: 330 DNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFF 389

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L    GT  Y+  ++ + +               ++ S   L A E+ +       +  
Sbjct: 390 PLIPYPGTEAYQWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFC-----NRA 444

Query: 266 NLNYWRYGDYI 276
              Y+    YI
Sbjct: 445 RKKYYLRASYI 455


>gi|294793560|ref|ZP_06758697.1| putative radical SAM domain protein [Veillonella sp. 3_1_44]
 gi|294455130|gb|EFG23502.1| putative radical SAM domain protein [Veillonella sp. 3_1_44]
          Length = 446

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +NS      + +   I+  L +++ +    G + I  I            Q
Sbjct: 170 CPHKCDFC-YNSSGTHQYINRN--IEDVLRDIKRL----GTKHIMFIDDNFIGNISWTKQ 222

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I     K   ++ N  +T++              ++ G   + +G +S+  QSL  
Sbjct: 223 FLERI-----KPLKLNWNAAVTMKIGQY---PELMDLMKETGCQSLFIGFESISPQSLSS 274

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  N   E    I+        ++   ++ L   T   ++  L   +S  +D ++ + 
Sbjct: 275 VHKMQNNREEFERLINELHKRGIMVNASFVFGLDGDTPETFKNTLDWIISQKIDTITSHI 334

Query: 207 LTIEKGTLFYKMH 219
           +T   GT FYK  
Sbjct: 335 VTPYPGTEFYKRM 347


>gi|293376437|ref|ZP_06622669.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Turicibacter sanguinis
           PC909]
 gi|325845044|ref|ZP_08168360.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Turicibacter sp. HGF1]
 gi|292644946|gb|EFF63024.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Turicibacter sanguinis
           PC909]
 gi|325488920|gb|EGC91313.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Turicibacter sp. HGF1]
          Length = 502

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P   +    Q   K G  +  I L VQS   + L+ + R +     +  +   +  
Sbjct: 293 TTSHPRDFDAKTIQTLAKRGNLMEHIHLPVQSGNNEVLKRMNRKYTREMYLQLVRDLKEA 352

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +S   D+I   P +T  Q++  L        +    +  +  +GT   +M
Sbjct: 353 IPGVSITTDIIVGFPGETEEQFQDTLSLVEEVGYEGAFTFIFSPREGTPAARM 405


>gi|161504166|ref|YP_001571278.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160865513|gb|ABX22136.1| hypothetical protein SARI_02272 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 488

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 171 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 226

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 227 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 278

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 279 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETSDDFEKTMKL 338

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 339 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 388


>gi|114328163|ref|YP_745320.1| tRNA 2-methylthioadenosine synthase-like protein [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316337|gb|ABI62397.1| tRNA 2-methylthioadenosine synthase-like protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 434

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 72/197 (36%), Gaps = 9/197 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C  +C +C            +   I + + +++ + Q      + + +      P L   
Sbjct: 158 CDHRCTFC---IIPFGRGPSRSVPIGAIVDQVRLLVQRGYQEVVLTGVDITSYGPDLPGA 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  ++  +         + ++   +P  ++ + +    +    +  + L +Q+  +  
Sbjct: 215 PGLGQMMRRLLALVPELPRLRLS-SLDPEEIDEDLWHLIAEEPRLMPHLHLSLQAGSDMI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H+ + A+  +  AR +     +  D+I   P +T   +E  L       +  L
Sbjct: 274 LKRMKRRHSRAGALETVARARRLRPGIAIGADVIAGFPTETEALFEETLAFVREAQLPFL 333

Query: 203 SLYQLTIEKGTLFYKMH 219
            ++  +   GT   +M 
Sbjct: 334 HVFPYSERPGTPAARMP 350


>gi|160891134|ref|ZP_02072137.1| hypothetical protein BACUNI_03581 [Bacteroides uniformis ATCC 8492]
 gi|156859355|gb|EDO52786.1| hypothetical protein BACUNI_03581 [Bacteroides uniformis ATCC 8492]
          Length = 309

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 7/206 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +  E +++  
Sbjct: 46  CTYCN-NQTFNPDYCRTEKSITRQLEEGKQFFAHKYPEMKYLAYFQAYTNTYGELEDLKR 104

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +           V + I   P  +     +  +   +     +  G++S ++++L  +
Sbjct: 105 KYEEALSA---DGVVGLVIGTRPDCMPDSLLDYLEEMNRHTFLLVEYGIESTDDKTLCRI 161

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H    A  A+    +        +I  LP +T      +        +  L ++QL 
Sbjct: 162 NRGHTFHAAADAVERTASRGILTGGHVILGLPGETHESIVAQAGVLSRLPLTTLKMHQLQ 221

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVD 234
           + +GT     ++         +V   
Sbjct: 222 LIRGTRMALEYRQHPEDFHLFDVEEY 247


>gi|310831381|ref|YP_003970024.1| putative ELP3 family histone acetyltransferase [Cafeteria
           roenbergensis virus BV-PW1]
 gi|309386565|gb|ADO67425.1| putative ELP3 family histone acetyltransferase [Cafeteria
           roenbergensis virus BV-PW1]
          Length = 704

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 8/149 (5%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  +        R  G  R+ LG+Q + +  L ++ R    S+++ AI L +
Sbjct: 306 IGLTLETRPDFITPKEITILRSYGCTRVQLGIQHINDDILNYINRGCKHSKSVRAIKLLK 365

Query: 166 NIFPRMSFDLIYAL----PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           N   ++   L+  L      + +  +E  L        D   +Y       +   + ++D
Sbjct: 366 NAGFKVDIHLMPDLPSSNFWEDVRMFEHVLSH-EELQADQWKIYPCQTLDHSKIKEWYED 424

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           G      E   +  ++   +I   H    
Sbjct: 425 GSYKPYFEQKKIINFD---NIYWDHFYKQ 450


>gi|319901201|ref|YP_004160929.1| hypothetical protein Bache_1337 [Bacteroides helcogenes P 36-108]
 gi|319416232|gb|ADV43343.1| conserved hypothetical protein [Bacteroides helcogenes P 36-108]
          Length = 305

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 66/194 (34%), Gaps = 7/194 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  +   L E +       P      +F   T +  E +++  
Sbjct: 42  CTYCN-NQTFNPDYCRTEKSVTRQLEEGKLFFARKYPEMKYLAYFQAYTNTYGELEDLKR 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
                 +  +V   V + I   P  +  +     +G  K     +  G++S  +++L  +
Sbjct: 101 ---KYEEALSVDGVVGLVIGTRPDCMPDDLLRYLEGINKHTFLLVEYGIESTRDETLVRI 157

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H    A+ A+             +I  LP +T      + +      +  L ++QL 
Sbjct: 158 NRGHTFRAAMDAVERTAACGILTGGHVILGLPGETHESIVTQAEILSDLPLTTLKMHQLQ 217

Query: 209 IEKGTLFYKMHKDG 222
           + +GT     +   
Sbjct: 218 LIRGTRMALEYAQH 231


>gi|307248353|ref|ZP_07530376.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307250579|ref|ZP_07532521.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307252960|ref|ZP_07534848.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307261809|ref|ZP_07543475.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|229890699|sp|B0BQR0|MIAB_ACTPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|306855091|gb|EFM87271.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306857395|gb|EFM89509.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306859598|gb|EFM91623.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306868627|gb|EFN00438.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
          Length = 475

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     V         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRVRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R + P +  S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  D         +A     +       
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAADLPDDISEEEKKARLARLQQRINHQAMQF 375


>gi|218248044|ref|YP_002373415.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cyanothece sp.
           PCC 8801]
 gi|229890509|sp|B7JZ48|MIAB_CYAP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|218168522|gb|ACK67259.1| RNA modification enzyme, MiaB family [Cyanothece sp. PCC 8801]
          Length = 451

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    ++ L EM+ + +  G + ++ +      +G   P 
Sbjct: 162 CNERCSYC---VVPNVRGVEQSRTPEAILAEMELLGKQ-GYKEVTLLGQNIDAYGRDLPG 217

Query: 83  LI-EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    ++   + D +     V     I     +P           ++         +  Q
Sbjct: 218 VTESGRHQHTLTDLLYTVHDVVGIERIRFATSHPRYFTERLIAACQELSKVCEHFHIPFQ 277

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R+  P   +S D I   P +T  Q+E  L+    
Sbjct: 278 SGDNDILKAMKRGYTHEKYRQIIDKIRDYMPDASISADAIVGFPGETEEQFENTLKLVED 337

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 338 IGFDQLNTAAYSPRPGTP 355


>gi|307246244|ref|ZP_07528325.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307255228|ref|ZP_07537043.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307257391|ref|ZP_07539161.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307259662|ref|ZP_07541386.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306852853|gb|EFM85077.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306861777|gb|EFM93756.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306864241|gb|EFM96154.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306866307|gb|EFM98171.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 475

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     V         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRVRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R + P +  S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  D         +A     +       
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAADLPDDISEEEKKARLARLQQRINHQAMQF 375


>gi|229890695|sp|Q1QV24|MIAB_CHRSD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 448

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 76/222 (34%), Gaps = 12/222 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F               +S + E+  +    G R I     ++    G   L + 
Sbjct: 158 CSKYCTFCVVPYTRGEEVSRPFESVMEEVIHLADQ-GVREINLLGQNVNAYRGENQLGDE 216

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A ++  +A    +      T  ++P     +  + Y +    V+ + L VQ+  ++ 
Sbjct: 217 IDLAELIGCVAAVEGIDRIRFTT--SHPVEFSDSLIEAYGEIPELVSHLHLPVQAGSDRI 274

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E +  +   R + P +SF  D I   P +T   +   +        D  
Sbjct: 275 LAAMKRGHTVEEYVDKLERIRALRPDISFSSDFIIGFPGETEEDFMDTMNLIQRIGFDAS 334

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +  +   GT    +  +       + +A+    L Q    
Sbjct: 335 FSFVYSPRPGTPAANLEDETPEATKKQRLAILQERLNQQTMQ 376


>gi|237708704|ref|ZP_04539185.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724153|ref|ZP_04554634.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265756024|ref|ZP_06090491.1| TIGR01212 family radical SAM protein [Bacteroides sp. 3_1_33FAA]
 gi|229437341|gb|EEO47418.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229457130|gb|EEO62851.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234102|gb|EEZ19703.1| TIGR01212 family radical SAM protein [Bacteroides sp. 3_1_33FAA]
          Length = 320

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 29/202 (14%)

Query: 32  CPYCD---FN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C YC+   FN        S  ++ + G+  F++ +  EM+++            +F   T
Sbjct: 57  CTYCNNQTFNPAYCHTGKSVTQQLEEGKRFFVRKY-PEMKYLA-----------YFQAYT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGV 137
            +      +  +     +   V   V + I   P  +    ++  +   K     +  G+
Sbjct: 105 NTY---GELEELKRKYEEALMVEDVVGLVIGTRPDCMPISLLDYLEELGKHIFVLVEYGI 161

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S ++++LR + R H  + +  A+         +   +I  LP +       +       
Sbjct: 162 ESTDDETLRRINRGHTFAVSAEAVRKTAERGILVGGHIILGLPGEKREMLIGQAGVLSQL 221

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
            +  L L+QL + KGT     +
Sbjct: 222 PLTTLKLHQLQLIKGTRMASEY 243


>gi|118444247|ref|YP_877101.1| radical SAM protein [Clostridium novyi NT]
 gi|118134703|gb|ABK61747.1| radical SAM protein, TIGR01212 family [Clostridium novyi NT]
          Length = 308

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 21/229 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C YC      DF         G  NF I S   +++ M +    +     +F   T +  
Sbjct: 48  CIYCSERGSGDF--------AGDRNFSISSQFDDIKEMMKNKWKKGKYIAYFQAYTNTYA 99

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLE 141
             + +        +       V + I   P  +     +   +        + LG+Q+  
Sbjct: 100 PVEELRR---KYEEAINEEGVVALAIATRPDCLSDEVVELISQFNDRVYTWVELGLQTSN 156

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           E + + + R +N      A+   R     +    I+ LP +        ++      +  
Sbjct: 157 ECTAKLINRGYNLPIFEDALTRLREKNIDVVVHTIFGLPGEDREDMLNTIRYLRKKDIQG 216

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + ++ L + KGT   K+++ G L    ++  +D+     S+   + +  
Sbjct: 217 IKIHLLHLLKGTPMVKLYEQGKLKFLEQDEYIDIIVKAVSMLPQNIVIH 265


>gi|330995913|ref|ZP_08319808.1| radical SAM protein family [Paraprevotella xylaniphila YIT 11841]
 gi|329574252|gb|EGG55827.1| radical SAM protein family [Paraprevotella xylaniphila YIT 11841]
          Length = 309

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 7/198 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   ++   +      ++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFNPAYCRTEKTITEQLEEGKRFFGRKYPDMKF-LAYFQAYTNTY---GEVRE 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           ++    +   V   V I I   P  +                  +  G++S+++ +L  +
Sbjct: 101 VIRKYEEALAVPDVVGIVIGTRPDCMPQALLDYLAGLNSRTFLMVEYGIESVDDGTLVRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E    +        R    +I  LP +   +   +        +  L ++QL 
Sbjct: 161 NRGHTFAETEETLRRTAGAGIRTGGHIILGLPGEKREELVGQAALVSRLPLTTLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVL 226
           + KGT     +       
Sbjct: 221 LIKGTRMAHEYGLHPEWF 238


>gi|303250593|ref|ZP_07336790.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|303253077|ref|ZP_07339227.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302648062|gb|EFL78268.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302650581|gb|EFL80740.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
          Length = 455

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 136 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 191

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     V         ++P     +  + YR     V+ + L
Sbjct: 192 GGICTF---AELLRLVAAIDGIDRVRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 243

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R + P +  S D I   P +T   +E  ++ 
Sbjct: 244 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 303

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  D         +A     +       
Sbjct: 304 IEQVNFDMSFSFIYSARPGTPAADLPDDISEEEKKARLARLQQRINHQAMQF 355


>gi|257066383|ref|YP_003152639.1| hypothetical protein Apre_0890 [Anaerococcus prevotii DSM 20548]
 gi|256798263|gb|ACV28918.1| conserved hypothetical protein [Anaerococcus prevotii DSM 20548]
          Length = 315

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 9/155 (5%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNR-ISLG 136
           + +  ++   ++    K++ V+    I+I      V  +         R+ G++    LG
Sbjct: 93  TYMSLRDFKEVISACNKDYIVA----ISISTRSDCVSRDKLVFLEEFSRETGIDITFELG 148

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   +SL  L R  + ++ I A+ +      R+   LI +LP   +       +    
Sbjct: 149 LQTANYRSLDILNRGESLADYILAVQMINEYKFRVCTHLILSLPWDDLRDVVETARIVNV 208

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L I K T   KM+++  + + S+  
Sbjct: 209 LGVKEIKIHSLFIVKNTKLAKMYEENKIQMISKEE 243


>gi|165976746|ref|YP_001652339.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165876847|gb|ABY69895.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 463

 Score = 69.6 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 74/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 144 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 199

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     V         ++P     +  + YR     V+ + L
Sbjct: 200 GGICTF---AELLRLVAAIDGIDRVRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 251

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R + P +  S D I   P +T   +E  ++ 
Sbjct: 252 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 311

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  D         +A     +       
Sbjct: 312 IEQVNFDMSFSFIYSARPGTPAADLPDDISEEEKKARLARLQQRINHQAMQF 363


>gi|205351955|ref|YP_002225756.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207856135|ref|YP_002242786.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|229890644|sp|B5QWC1|MIAB_SALEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890645|sp|B5R817|MIAB_SALG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|205271736|emb|CAR36570.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206707938|emb|CAR32227.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326626994|gb|EGE33337.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 474

 Score = 69.6 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETNDDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|304310522|ref|YP_003810120.1| 2-methylthioadenine synthetase [gamma proteobacterium HdN1]
 gi|301796255|emb|CBL44463.1| 2-methylthioadenine synthetase [gamma proteobacterium HdN1]
          Length = 445

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 12/222 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F               +  + E++ + +  G R +     ++    G     E 
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRHFEDVMREVRHL-ETLGVREVNLLGQNVNAYRGENEHGEI 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A +++ IA    +      T  ++P          YR+    V+ + L  QS  ++ 
Sbjct: 216 VDLAELIEHIAALPGIGRIRYTT--SHPMECSDALVDAYRRIPKLVSHLHLPAQSGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + RNH  ++ +A I   +   P   +S D I   P +T   +   LQ       D  
Sbjct: 274 LAAMKRNHTRADYLAWITKLKEARPDLCVSSDFIIGFPGETEDDFNDTLQLIEEVGYDTS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +  +   GT    +  D         +A+  + + Q+  S
Sbjct: 334 FSFVYSPRPGTPAADLPDDMPDEEKKRRLALLQHRIIQNALS 375


>gi|294778301|ref|ZP_06743727.1| radical SAM protein, TIGR01212 family [Bacteroides vulgatus PC510]
 gi|294447929|gb|EFG16503.1| radical SAM protein, TIGR01212 family [Bacteroides vulgatus PC510]
          Length = 320

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 29/202 (14%)

Query: 32  CPYCD---FN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C YC+   FN        S  ++ + G+  F++ +  EM+++            +F   T
Sbjct: 57  CTYCNNQTFNPAYCHTGKSVTQQLEEGKRFFVRKY-PEMKYLA-----------YFQAYT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGV 137
            +      +  +     +   V   V + I   P  + ++        G      +  G+
Sbjct: 105 NTY---GELEELKRKYEEALMVEDVVGLVIGTRPDCMPISLLDYLEDLGKRTFVLVEYGI 161

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S ++++LR + R H  + +  A+         +   +I  LP +       +       
Sbjct: 162 ESTDDETLRRINRGHTFAVSAEAVRKTAERGILVGGHIILGLPGEEREMLIRQAGVLSQL 221

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
            +  L L+QL + KGT     +
Sbjct: 222 PLTTLKLHQLQLIKGTRMASEY 243


>gi|154249715|ref|YP_001410540.1| radical SAM domain-containing protein [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153651|gb|ABS60883.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 393

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 73/234 (31%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC         VR   + Q   + +  +   + + +   P +       G TP+
Sbjct: 154 CPFNCGYCQTPRLAGKIVRHRSIEQIVEYEKISVKYGKTIARFITPNAFGYGSKNGVTPN 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVE--ITIEANPSSVEVNNFQGYRKA-GVNRISLGVQS 139
           L   + I  +L  + K   V+         +  P SV     +  +K    + I +G QS
Sbjct: 214 L---EAIDELLYKV-KATGVTEIYFGTFPSDVRPESVTDEVLKIIKKYVNHDYIVIGAQS 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              + L  + R H   +   A+ +          D I+  P +T    E   +       
Sbjct: 270 GSNRILEKIQRGHTVEKVEEALEILAQNGFYAKVDFIFGFPFETKEDVEETFKFIEKI-- 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +  Y   I   T F  +       +    +    Y    ++ S   L  Y  
Sbjct: 328 --VKKYNAKIHAHT-FMPLPGTPLWNVGPGILKNYHYKFLGTLASQGILDGYWT 378


>gi|297526146|ref|YP_003668170.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
 gi|297255062|gb|ADI31271.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 71/225 (31%), Gaps = 20/225 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+    +S       +  L      + I F           
Sbjct: 208 CPYGCIYC-----ITSYFWGRRIRFRSAKNVADEVEFLVNKYKANHIAF--------SDD 254

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++      +L  I +      ++  +  +  + +     +     G   +  GV+S  ++
Sbjct: 255 DLVINRRFVLGFIDEIKKRGLDITFSCGSRVNHINKEILKTLYDNGCTALYFGVESASQE 314

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  +G+     +A       + +        I   P +T+   +  +  A+    ++  
Sbjct: 315 TLNRIGKRITIEQAERVFKWVKELKGFALGSFILGFPWETIDDMKKTVDFAIKLDPNYAQ 374

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              LT   GT  ++  K  +L    E+   + Y   + +      
Sbjct: 375 FTVLTPYPGTPLFEYAKKYNL---IEDWNWEHYTTVKPVMRGFHF 416


>gi|294785088|ref|ZP_06750376.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294486802|gb|EFG34164.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 297

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 78/215 (36%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCSFCS----MYKDKKFVIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L+F
Sbjct: 85  LIQVLDYIREVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDEALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQEGKYDYMEGIEVLKEMKLV 239


>gi|57641999|ref|YP_184477.1| 2-methylthioadenine synthetase [Thermococcus kodakarensis KOD1]
 gi|57160323|dbj|BAD86253.1| probable 2-methylthioadenine synthetase [Thermococcus kodakarensis
           KOD1]
          Length = 427

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 91/243 (37%), Gaps = 28/243 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSIFFGGGTPSLIE 85
           C+  C YC      R  +   +++    +  ++W+++    G + I       G      
Sbjct: 148 CLNACTYCA----TRFARGVLKSYKPELV--LKWVKEALARGYKEIQLSSEDTGCYGFDI 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAGV-NRISLGVQSL 140
             N+A +LD I     +  +  I +   NP+ V        + Y+   V   + L VQS 
Sbjct: 202 GTNLAELLDEITA---IEGDFRIRVGMMNPNHVIKFLDELIEVYQDPKVYKFLHLPVQSG 258

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + + LR +GRN+   E    +     +     ++ D+I   P +    ++  ++      
Sbjct: 259 DNEVLRRMGRNYTVEEFEEIVSEFRRKIPGLNLNTDIIVGFPGEGEEAFQNTVELVKRVR 318

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D +++ + +   GT+  K        LP   V      L +          YEI N ++
Sbjct: 319 PDKINVSRYSPRPGTIAAKW-----KQLPGWKVKERSRILHRLRLQIA----YEI-NQTY 368

Query: 259 LGA 261
           LG 
Sbjct: 369 LGK 371


>gi|322513853|ref|ZP_08066934.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinobacillus ureae ATCC
           25976]
 gi|322120315|gb|EFX92257.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinobacillus ureae ATCC
           25976]
          Length = 475

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 75/232 (32%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     V         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRVRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R + P +  S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  D       E +A     +       
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAADLPDDISEEEKKERLARLQQRINHQAMQF 375


>gi|238019340|ref|ZP_04599766.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
 gi|237864039|gb|EEP65329.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
          Length = 431

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 77/252 (30%), Gaps = 28/252 (11%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG------GGTPSLIEP 86
           YC F          +   +   + E + + +      + + I  G       G P+L   
Sbjct: 157 YCAFCIIPYTRGKLKSRKVDDIVQEAKRLVEHGFHEIVLTGIHLGNYGVELPGRPTL--A 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  +L+          ++E         V     +           + L +Q+  +  
Sbjct: 215 DVVKALLEIPDLYRIRFGSIESV------EVSDELVELMATNKRVCPHLHLPLQAGSDHV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++   E    I   R+    +S   D+I   P++T   +E  L         H+
Sbjct: 269 LKLMKRHYTLQEYKDLIASLRSRIKDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHI 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA- 261
             +  +I +GT    M       +    VA+          S  G  AY  S     G  
Sbjct: 329 HAFPYSIREGTPAATMPDQVPEAVKKTRVALLN------GLSQSGYEAYAKSRIGKPGEI 382

Query: 262 --ESLHNLNYWR 271
             E   N  Y  
Sbjct: 383 LIEKEENGYYMG 394


>gi|319406556|emb|CBI80198.1| bifunctional enzyme [Bartonella sp. 1-1C]
          Length = 460

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  I   + ++           +  I   G   +    Q
Sbjct: 176 CDKFCTFC-----VVPYTRGAE--ISRSVKQITAEAHQLIEAGVKEITLLGQNVNAWHGQ 228

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
           +I      + D +     +     +    N P  ++ +    +R   +    + L VQS 
Sbjct: 229 SIDGKTWRLGDLLHHLAKIDGLKRLRYTTNHPRDMDDSLIAAHRDLDILMPYLHLPVQSG 288

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H +   +  I   R   P ++F  D I   P +T   +E  ++      
Sbjct: 289 SDRILKAMNRQHKSIHYLNLIDKIRAAKPDIAFSGDFIVGFPGETDEDFEETIKLIKQVG 348

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT+   M    D
Sbjct: 349 YSSAYSFKYSPRPGTVGATMKNHVD 373


>gi|308050552|ref|YP_003914118.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ferrimonas balearica DSM
           9799]
 gi|307632742|gb|ADN77044.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ferrimonas balearica DSM
           9799]
          Length = 476

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 63/196 (32%), Gaps = 15/196 (7%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIEPQN 88
           YC F              +   L E+  + +  G R I+ +      + G T        
Sbjct: 160 YCSFCVVPYTRGEEVSRPLDDVLYEIAQLAEQ-GVREINLLGQNVNAYRGET----HDGE 214

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           I    D +     +     +     +P     +    Y      V+ + L VQS  ++ L
Sbjct: 215 ICRFSDLLRYVAAIDGIDRLRYTTSHPVEFTQDIIDAYADVPELVDFLHLPVQSGSDRIL 274

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + RNH A E  + I   R + P +    D I   P +T   +E  ++       D   
Sbjct: 275 TMMKRNHTALEFKSIIRRLRKVRPNIHISSDFIVGFPNETDEDFEDTMKLIADIEFDQSF 334

Query: 204 LYQLTIEKGTLFYKMH 219
            +  +   GT    M 
Sbjct: 335 SFIYSPRPGTPAADMV 350


>gi|229890673|sp|A9MKB7|MIAB_SALAR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETSDDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|92114455|ref|YP_574383.1| tRNA-i(6)A37 modification enzyme MiaB [Chromohalobacter salexigens
           DSM 3043]
 gi|91797545|gb|ABE59684.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chromohalobacter
           salexigens DSM 3043]
          Length = 459

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 76/222 (34%), Gaps = 12/222 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F               +S + E+  +    G R I     ++    G   L + 
Sbjct: 169 CSKYCTFCVVPYTRGEEVSRPFESVMEEVIHLADQ-GVREINLLGQNVNAYRGENQLGDE 227

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A ++  +A    +      T  ++P     +  + Y +    V+ + L VQ+  ++ 
Sbjct: 228 IDLAELIGCVAAVEGIDRIRFTT--SHPVEFSDSLIEAYGEIPELVSHLHLPVQAGSDRI 285

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E +  +   R + P +SF  D I   P +T   +   +        D  
Sbjct: 286 LAAMKRGHTVEEYVDKLERIRALRPDISFSSDFIIGFPGETEEDFMDTMNLIQRIGFDAS 345

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +  +   GT    +  +       + +A+    L Q    
Sbjct: 346 FSFVYSPRPGTPAANLEDETPEATKKQRLAILQERLNQQTMQ 387


>gi|164686289|ref|ZP_02210319.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
           16795]
 gi|164601891|gb|EDQ95356.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
           16795]
          Length = 432

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 9/202 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   ++S + E++ +        + +          I+  
Sbjct: 152 CDRYCSYC---IIPYARGRVRSRDLESIVKEVENLASNGYKEVVLTGIHVASYGKDIKDS 208

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +I  +LD I +   +     I +    P        +             L +QS  +++
Sbjct: 209 DI-KLLDVIKQINDIEGIERIRLSSVEPILFTDEFVEAVSTMDKVCPHYHLSLQSGCDET 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E  A +   R   P +S   D+I   P +T  +++   +      + H+
Sbjct: 268 LKRMKRRYTTEEYKAIVDRLRAAIPNVSITTDVIVGFPGETNEEFDKTYEFLKDIELTHM 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
            +++ +  KGT    M    D 
Sbjct: 328 HVFKYSPRKGTPAATMENQVDP 349


>gi|114799640|ref|YP_758837.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Hyphomonas
           neptunium ATCC 15444]
 gi|122942826|sp|Q0C606|MIAB_HYPNA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|114739814|gb|ABI77939.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
           15444]
          Length = 449

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 15/229 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + +    G R I+ +      F G  P 
Sbjct: 157 CDKFCTFC---VVPYTRGAEMSRRVDDIVFETRSLASQ-GVREITLLGQNVNAFHGPAP- 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           ++E      +         +     I     +P  ++ +    +      +  + L VQS
Sbjct: 212 VLEGGEDWTLGQLCRHLSKIGGIERIRYTTSHPRDMDDDLIAAHGDTPAMMPFLHLPVQS 271

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A      I   R   P ++   D I   P ++   +E  +Q     
Sbjct: 272 GSDRILKAMNRGHTADHYRDIITRVRAARPDIAIASDFIVGFPGESDADFEATMQLVRDI 331

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  ++ +   GT   +MH      +    +      L +  T  +
Sbjct: 332 GYAIAYSFKYSSRPGTPAAEMHGHLSESVKDARLQALQALLREQQTEFN 380


>gi|56414201|ref|YP_151276.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197363125|ref|YP_002142762.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56128458|gb|AAV77964.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094602|emb|CAR60123.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 488

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 171 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 226

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 227 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 278

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 279 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 338

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 339 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 388


>gi|255013325|ref|ZP_05285451.1| Fe-S oxidoreductase [Bacteroides sp. 2_1_7]
          Length = 485

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +  + +
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFTANKKR 274

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +I  +L     N  +       +      +++      +KAG   I  G++S  +Q L
Sbjct: 275 VLDICRLLVEKKLNKRLKWLCNARV-----DLDLETMLAMKKAGCRLIIPGIESGSQQIL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +          +  A+     +    +     +T    E  L+ AL    D    +
Sbjct: 330 DNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFF 389

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L    GT  Y+  ++ + +               ++ S   L A E+ +       +  
Sbjct: 390 PLIPYPGTEAYQWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFC-----NRA 444

Query: 266 NLNYWRYGDYI 276
              Y+    YI
Sbjct: 445 RKKYYLRASYI 455


>gi|257060632|ref|YP_003138520.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cyanothece sp.
           PCC 8802]
 gi|256590798|gb|ACV01685.1| RNA modification enzyme, MiaB family [Cyanothece sp. PCC 8802]
          Length = 446

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    ++ L EM+ + +  G + ++ +      +G   P 
Sbjct: 157 CNERCSYC---VVPNVRGVEQSRTPEAILAEMELLGKQ-GYKEVTLLGQNIDAYGRDLPG 212

Query: 83  LI-EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    ++   + D +     V     I     +P           ++         +  Q
Sbjct: 213 VTESGRHQHTLTDLLYTVHDVVGIERIRFATSHPRYFTERLIAACQELSKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R+  P   +S D I   P +T  Q+E  L     
Sbjct: 273 SGDNDILKAMKRGYTHEKYRQIIDKIRDYMPDASISADAIVGFPGETEEQFENTLNLVED 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|212696247|ref|ZP_03304375.1| hypothetical protein ANHYDRO_00783 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676876|gb|EEB36483.1| hypothetical protein ANHYDRO_00783 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 318

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 16/207 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFGGGTPSLIEPQN 88
           C +C   S      +     +     +++  +   G R        +F   + + +E   
Sbjct: 45  CIFCS-ESGGSFENLPSSMTVD---KQLETNKNYIGNRYKAKKFIAYFQNFSNTYMEYDK 100

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-----RISLGVQSLEEQ 143
              +++   K +       I+I      +     +  +K          I LG+Q+   +
Sbjct: 101 FVEVIEACDKEY----ISAISISTRSDCITYRKLEFLKKISEKTGKDIIIELGLQTANYK 156

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ L R  + ++ I A ++  +   R+   +I +LP           +      V  + 
Sbjct: 157 TLKILNRCEDLADFIKACNMINDYGFRICTHVILSLPWDDNQDIVETARIINVLKVREVK 216

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           ++ L I K T   KM+K+ + V+PS+ 
Sbjct: 217 IHSLFIIKNTQLEKMYKNNEFVMPSKE 243


>gi|212693546|ref|ZP_03301674.1| hypothetical protein BACDOR_03063 [Bacteroides dorei DSM 17855]
 gi|212663799|gb|EEB24373.1| hypothetical protein BACDOR_03063 [Bacteroides dorei DSM 17855]
          Length = 308

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 79/228 (34%), Gaps = 30/228 (13%)

Query: 32  CPYCD---FN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C YC+   FN        S  ++ + G+  F++ +  EM+++            +F   T
Sbjct: 45  CTYCNNQTFNPAYCHTGKSVTQQLEEGKRFFVRKY-PEMKYLA-----------YFQAYT 92

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGV 137
            +      +  +     +   V   V + I   P  +    ++  +   K     +  G+
Sbjct: 93  NTY---GELEELKRKYEEALMVEDVVGLVIGTRPDCMPISLLDYLEELGKHIFVLVEYGI 149

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S ++++LR + R H  + +  A+         +   +I  LP +       +       
Sbjct: 150 ESTDDETLRRINRGHTFAVSAEAVRKTAERGILVGGHIILGLPGEKREMLIGQAGVLSQL 209

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +  L L+QL + KGT     +   D        A +  +L       
Sbjct: 210 PLTTLKLHQLQLIKGTRMASEYV-KDPEAFHLYTADEYVDLVIDYIEH 256


>gi|326574282|gb|EGE24230.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis 101P30B1]
          Length = 356

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 72/215 (33%), Gaps = 16/215 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R ++ +      + G      +
Sbjct: 68  CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQ-GVREVNLLGQNVNGYRGEK----D 122

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +  + Y+     V+ + L +QS   
Sbjct: 123 DGSICRFSELLHYVSYIDGIERIRYTTSHPLEFTDDIIEAYQSIDKLVSHLHLPIQSGSN 182

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L  + RNH     +  I   R I P   +S D I   P +T   +   LQ A     D
Sbjct: 183 QVLAAMKRNHTVDVYMNQIAKLRKIRPDLHLSSDFIIGFPGETDEDFLQTLQFAKDLDFD 242

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           H   +  +   GT    +  D  L    + +AV  
Sbjct: 243 HSYSFIYSKRPGTPASDLPDDVSLETKKQRLAVFQ 277


>gi|150395268|ref|YP_001325735.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Sinorhizobium
           medicae WSM419]
 gi|229890663|sp|A6U5H0|MIAB_SINMW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|150026783|gb|ABR58900.1| RNA modification enzyme, MiaB family [Sinorhizobium medicae WSM419]
          Length = 472

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 83/235 (35%), Gaps = 23/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVAQIVAEAEKLVE-GGVREITLLGQNVNAWHGAGP- 237

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    + D + +   +     +     +P  ++ +  + +R     +  + L VQS
Sbjct: 238 ---HGREWGLGDLLRRLGEIEGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQS 294

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A+E +A +   R + P ++   D I   P +T   +E  L+   + 
Sbjct: 295 GSDRILKAMNRRHTAAEYLALVARIRAVQPDLALSGDFIVGFPGETDEDFEDTLRLVDAV 354

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  ++ +   GT   ++ +        E+V      + Q++         E
Sbjct: 355 NYAQAFSFKYSTRPGTPGAELEQQ-----VPEDVKAKRLEILQALLIKQQRGFAE 404


>gi|87119366|ref|ZP_01075264.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121]
 gi|86165757|gb|EAQ67024.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121]
          Length = 438

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +     F    +  MQ   Q      +   ++    G  +   
Sbjct: 143 CSKYCTFC--VVPYTRGEEVSRPFTDILVEVMQLAEQGVREIHLLGQNVNAYRGVDNEGT 200

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A ++  IA+   V      T  ++P     +  + +R     V+ + L VQS  + 
Sbjct: 201 ESDLADVISAIAQIDGVERIRFTT--SHPVEFTDSLIEAFRNIPKLVSHLHLPVQSGADN 258

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H+    I  I+  +   P +S   D I   P +T   +   +        DH
Sbjct: 259 ILKAMKRGHDRQSYIDKINRIKEARPGISLSSDFIIGFPGETDQDFMDTMNLIQEIGFDH 318

Query: 202 LSLYQLTIEKGTL 214
              +  +   GT 
Sbjct: 319 SFSFIYSQRPGTP 331


>gi|242373585|ref|ZP_04819159.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348948|gb|EES40550.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
           M23864:W1]
          Length = 514

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 80/233 (34%), Gaps = 18/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  +  G+E   +     +  +R+L           G    S    +
Sbjct: 223 CDKFCTYC-----IVPFTRGKERS-RRPEDIINEVRELAREGYQEITLLGQNVNSY--GK 274

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +I  +  G+       S ++I       ++P        +     G  V  I L VQS  
Sbjct: 275 DIEGLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGN 334

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ +GR +     +  +   +N  P ++   D+I   P +T  Q+E  L        
Sbjct: 335 NAVLKIMGRKYTRESYLDLVSRIKNAIPDIALTTDIIVGYPNETEEQFEETLSLYDEVEF 394

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +H   Y  +   GT   KM  +    +  E +      + +   S   +  YE
Sbjct: 395 EHAYTYLYSQRDGTPAAKMKDNVPTEVKKERLQRLNKKVGE--YSQKAMSQYE 445


>gi|167462259|ref|ZP_02327348.1| hypothetical protein Plarl_06840 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383957|ref|ZP_08057687.1| Fe-S oxidoreductase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151434|gb|EFX44621.1| Fe-S oxidoreductase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 316

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 74/197 (37%), Gaps = 19/197 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF          +++ +  F   ++ ++    P +    +F   T +   
Sbjct: 55  CTFCSARGSGDF------AGSRRDDHVTQF-NTIRDLQHKKWPDAKYIGYFQAYTNTYAP 107

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +    + I +   V   V ++I   P  +  +  +   +        + LG+Q++ E
Sbjct: 108 VEVLREYYEVILEQPGV---VGLSIATRPDCLPDDVVEYLAELNKRTYLWVELGLQTVHE 164

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +   + R H+    + A+   R    R+   +IY LP +T        + A +  V  +
Sbjct: 165 STSDLINRAHDTQCYLNAVGKLRRHNIRICSHIIYGLPGETHEMMMDTCRAAAAMDVQGI 224

Query: 203 SLYQLTIEKGTLFYKMH 219
            ++ L + + T   + +
Sbjct: 225 KIHLLHLMRKTSMVRQY 241


>gi|229890667|sp|Q5PLT0|MIAB_SALPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890669|sp|B5BCD1|MIAB_SALPK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|16759622|ref|NP_455239.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142605|ref|NP_805947.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62179268|ref|YP_215685.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615109|ref|YP_001589074.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|25305454|pir||AC0584 MiaB protein (probable tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) miaB [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16501914|emb|CAD05141.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138236|gb|AAO69807.1| MiaB protein [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|62126901|gb|AAX64604.1| methylthiolation of isopentenylated A37 derivatives in rRNA
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364473|gb|ABX68241.1| hypothetical protein SPAB_02876 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|320084943|emb|CBY94732.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           tRNA-i(6)A37 methylthiotransferase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322713735|gb|EFZ05306.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 488

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 171 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 226

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 227 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 278

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 279 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 338

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 339 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 388


>gi|295695882|ref|YP_003589120.1| MiaB-like tRNA modifying enzyme [Bacillus tusciae DSM 2912]
 gi|295411484|gb|ADG05976.1| MiaB-like tRNA modifying enzyme [Bacillus tusciae DSM 2912]
          Length = 473

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 74/193 (38%), Gaps = 7/193 (3%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALIL 93
           +C F          +    ++ L + + + +      + +    GG  + +E   +A +L
Sbjct: 157 FCSFCIIPFSRGFVRSRKPENVLHQARRLAEAGYREIVLTGIHTGGYGADLEGYTLADLL 216

Query: 94  -DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGR 150
            D   +          +IEA+   ++       R++      + + +QS +++ LR + R
Sbjct: 217 VDLERELEDSVRIRISSIEAS--QIDERMLDVLRRSKQICRHLHIPLQSGDDEVLRRMRR 274

Query: 151 NHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            +  +E    IH  R + P ++   D+I   P +T  Q++   +         L ++  +
Sbjct: 275 RYTVAEYAEKIHRIREVLPEVAVTTDVIVGFPGETKEQFDNTRRLIEELKFSQLHVFPYS 334

Query: 209 IEKGTLFYKMHKD 221
             +GT   +    
Sbjct: 335 PRRGTAAARYPNP 347


>gi|254481450|ref|ZP_05094694.1| radical SAM domain protein [marine gamma proteobacterium HTCC2148]
 gi|214038078|gb|EEB78741.1| radical SAM domain protein [marine gamma proteobacterium HTCC2148]
          Length = 538

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 19/199 (9%)

Query: 28  CVKKCPYCDFNSHV------RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  KC YC     +      R+ +     +  +     +    L     +S++ F   + 
Sbjct: 214 CPFKCTYCGNTKFIENDVGYRKLRHPSARYAVA-----EIKAALEAQPYLSTVCFHDDSF 268

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
             I    +A   +   +   +   V   I   P+ V  +  Q     G+NRI +GVQS  
Sbjct: 269 MAIPYDRLAEFAEIWREEVGIPFAVYGVI---PNYVRQDKLQVLTWGGMNRIRMGVQSGS 325

Query: 142 EQSLRFLGRNHNASEAIAA----IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++ L F  R     + +AA       A       ++D+I   P +T       L+    +
Sbjct: 326 KRILDFYQRPTPPEDVLAASMVCAEFAPKYHIPPAYDIIVDNPIETREDVVETLELLHQF 385

Query: 198 A-VDHLSLYQLTIEKGTLF 215
                L+++ L     T  
Sbjct: 386 GRPFTLNIFSLKAIPNTRL 404


>gi|254392938|ref|ZP_05008104.1| MoeK5 [Streptomyces clavuligerus ATCC 27064]
 gi|197706591|gb|EDY52403.1| MoeK5 [Streptomyces clavuligerus ATCC 27064]
          Length = 434

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C       +  V +++  ++    +  M +L     +  I F     +L    
Sbjct: 171 CPFKCSFC------FKQAVDKKSMYRTPEDVVGEMTELQKRWGVKEIMFYDDVFTL---- 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +  A        V          V     +    AG  R+  G++  + + L  
Sbjct: 221 HRGRVREICALINERGLKVRWEAPTRVDLVPEKLLEAMAGAGCVRLRFGIEHGDPEILAR 280

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+  A     +     I     ++  Q+   L  A    +D+ S Y  
Sbjct: 281 MRKESDIGKIERAVTSAHEAGIKGFGYFIVGWLDESREQFRRTLDLACRIPLDYASFYTA 340

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 341 TPLPGTPLH 349


>gi|320162381|ref|YP_004175606.1| putative tRNA-thiotransferase [Anaerolinea thermophila UNI-1]
 gi|319996235|dbj|BAJ65006.1| putative tRNA-thiotransferase [Anaerolinea thermophila UNI-1]
          Length = 438

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 80/232 (34%), Gaps = 19/232 (8%)

Query: 24  HWP---FCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           H P    C   C YC   +   + R +  ++   ++     Q ++++T    I    +G 
Sbjct: 151 HIPVVYGCSHACTYCIIPYRRGIERSRPPEDILAEARALVRQGVKEITLLGQIVD-RYGK 209

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
             P+      + + L  I     +       + ++P+ +              +  I + 
Sbjct: 210 DNPAYPTLAGLLIRLSEIEGLERIR-----FLTSHPNWMTDELLDAVASLPKVMPHIEVP 264

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
            Q+ ++  L  + R + A +    I   R   P +S   D+I   P +T  Q+    +  
Sbjct: 265 AQAGDDTVLENMKRGYTAEQYRELIARIRERIPGVSIATDIIVGFPGETEEQFMNTYRLL 324

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +D   L + +   GT+  +  KD       E   +  + + + +    
Sbjct: 325 EDLRLDVAHLARYSPRPGTVSARRMKDD----VPEEEKMRRFRMLEELQERI 372


>gi|297583532|ref|YP_003699312.1| hypothetical protein Bsel_1234 [Bacillus selenitireducens MLS10]
 gi|297141989|gb|ADH98746.1| conserved hypothetical protein [Bacillus selenitireducens MLS10]
          Length = 322

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 72/222 (32%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        Y   +   +     +++       P +    +F   T +      +  
Sbjct: 52  CTFCS-KRGSGDYAGDRRETVLDQFHDVKNRLSYKWPEARYMAYFQAYTNTYAPVNELRA 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + + + K   V   V I I   P  +  +         K     + LG+QS  + +   +
Sbjct: 111 MFEPVLKEEGV---VGIAIGTRPDCLPDDVVDYLADLNKRTFLWVELGLQSAHDVTGERI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +H  R+   R+   +I  LP +T        + A +  V+ + ++ L 
Sbjct: 168 NRAHDFQTYKEGVHKLRSQGIRVCAHIINGLPGETREMMIETAEAAANLGVEGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + K T   K  + G+  L       ++            +  
Sbjct: 228 VLKQTAMAKELERGEFELLDRETYTEIVLRQLERLPEEMVIH 269


>gi|114565997|ref|YP_753151.1| oxygen-independent coproporphyrinogen III oxidase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114336932|gb|ABI67780.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 291

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 83/222 (37%), Gaps = 9/222 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C    + +     +   ++    +++  R   G   I S+FF  G   +++ 
Sbjct: 25  CPHNRCTFCSLYKNTK----FRIRPVEEIKEDLRMARDYYGEY-IESVFFADGNTIIMKT 79

Query: 87  QNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  I +     +     + +   +   +   + + +  R AG+ RI  G++S ++  L
Sbjct: 80  EQLLDIFEYTRSLFPYLERITVYGSSRFVNKKSLEDLKRLRAAGLKRIHTGMESGDDIIL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
             + +  N+ E I+A    +     +S   +  +  +  +            +++ D + 
Sbjct: 140 ERIKKGTNSQEIISAGLKLKEAGISVSEYYLVGIGGKERSREHALNSALTLSAFSPDFIR 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L        T  Y  +++G   L S + A+    L     + 
Sbjct: 200 LRTYVPMPNTPLYDDYQNGVFALLSPHEALREVRLLIENLNC 241


>gi|116250164|ref|YP_766002.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|123082073|sp|Q1MMB6|MIAB_RHIL3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115254812|emb|CAK05886.1| putative MiaB protein (methylthiolation of isopentenylated A37
           derivatives in rRNA) [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 473

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + E + +   +G R I+    ++    G  S 
Sbjct: 187 CDKFCTFC---VVPYTRGSEVSRSVSQIVEEAEKLAD-SGVREITLLGQNVNAWHGAGSQ 242

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E  ++  +L  +A+   ++     T  ++P  ++      +R     +  + L VQS  
Sbjct: 243 GEAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLINAHRDLSALMPYLHLPVQSGS 300

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A+E +A I   R + P ++   D I   P +T   ++  L+       
Sbjct: 301 DRILKAMNRRHTAAEYLALIERIRTVRPDIALSGDFITGFPGETDEDFKDTLRLVEEVRY 360

Query: 200 DHLSLYQLTIEKGTL 214
                ++ +   GT 
Sbjct: 361 AQAFSFKYSTRPGTP 375


>gi|33151471|ref|NP_872824.1| hypothetical protein HD0226 [Haemophilus ducreyi 35000HP]
 gi|81423890|sp|Q7VP74|MIAB_HAEDU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33147691|gb|AAP95213.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 475

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 75/235 (31%), Gaps = 26/235 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     +         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRLRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLRAVRPNIQISSDFIVGFPGETAEDFEQTMKI 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                 D    +  +   GT    +  D       + +A     +         L
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPASDLPDDVSENEKKDRLAHLQQRINHQAMQFSRL 378


>gi|227820628|ref|YP_002824598.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Sinorhizobium
           fredii NGR234]
 gi|227339627|gb|ACP23845.1| putative tRNA-i(6)A37 modification enzyme MiaB [Sinorhizobium
           fredii NGR234]
          Length = 466

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 72/197 (36%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E + +    G R I+ +      + G  P+
Sbjct: 183 CDKFCTFC---VVPYTRGAEVSRPVAQILAEAEKLVD-GGVREITLLGQNVNAWHGAGPN 238

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +      + D + +   +     +     +P  ++ +  + +R     +  + L VQS
Sbjct: 239 GRD----WGLGDLLRRLGEIDGLARLRYTTSHPRDMDESLIEAHRSMAKLMPYLHLPVQS 294

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A+E +A +   R + P ++   D I   P +T   +E  ++     
Sbjct: 295 GSDRILKAMNRRHTAAEYLALVERIRAVQPDLALSGDFIVGFPGETEADFEETMRLVEVV 354

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 355 GYAQAFSFKYSTRPGTP 371


>gi|238028582|ref|YP_002912813.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           glumae BGR1]
 gi|237877776|gb|ACR30109.1| TRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia glumae BGR1]
          Length = 457

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P        + Y +    VN + L VQ 
Sbjct: 213 GSTEIADFATLIEYVADLPGIERIRYTT--SHPKEFTQRLLEVYARVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRVLMAMKRGYTVLEYKSLIRKLRAIRPGLSLSTDIIVGFPGETEADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 RYDTSFSFIYSPRPGTPAANLH 352


>gi|218262229|ref|ZP_03476768.1| hypothetical protein PRABACTJOHN_02442 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223519|gb|EEC96169.1| hypothetical protein PRABACTJOHN_02442 [Parabacteroides johnsonii
           DSM 18315]
          Length = 318

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 66/194 (34%), Gaps = 7/194 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFSPEYCHTEKSATEQLEAGVRFFSRKYPEMK-YLAYFQAYTNTY---DKLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           ++    +       V + +   P  +     + F    +     I  G++S  +++L  +
Sbjct: 101 LISKYEEALACPDVVGLIVGTRPDCMPDALLDYFSTLSQKKFVMIEYGLESTLDRTLTRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  +E+   I             LI  LP ++  +         +  +  L L+QL 
Sbjct: 161 NRGHTHAESEETIRRTAARNIYTGAHLILGLPGESREEILHHADILSALPLTTLKLHQLQ 220

Query: 209 IEKGTLFYKMHKDG 222
           + +GT   +   + 
Sbjct: 221 LIRGTRMAREQAEH 234


>gi|162148088|ref|YP_001602549.1| hypothetical protein GDI_2305 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209542702|ref|YP_002274931.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786665|emb|CAP56248.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530379|gb|ACI50316.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 420

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 71/201 (35%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + + +++ +        + +      +GG  P  
Sbjct: 141 CDHRCTFC---IIPFGRGPSRSVPVGAVVEQVRALVASGYREIVLTGVDITSWGGDLPGR 197

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                +   +L  + +   +          +P  ++ + ++   + G  +  + L +Q+ 
Sbjct: 198 PALGQLCRRVLALVPELERLR-----LSSVDPVEIDDDLWRLLAQEGRFMPYLHLSLQAG 252

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H   +    +  AR   P +    D+I   P +T   +   L    +  
Sbjct: 253 SDMVLKRMKRRHLVEDVARVLDRARACRPDLGIGADVIAGFPTETDALFAETLDFVRAQR 312

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + +L ++  +   GT   +M 
Sbjct: 313 LPYLHVFPYSERPGTPAARMP 333


>gi|39998504|ref|NP_954455.1| radical SAM domain/B12 binding domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39985451|gb|AAR36805.1| radical SAM domain protein/B12 binding domain protein [Geobacter
           sulfurreducens PCA]
          Length = 472

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 88/252 (34%), Gaps = 18/252 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YCD +   R ++     +I      ++ +  L     I  +FF     +    +
Sbjct: 210 CPYQCSYCDRSVFSRGFRFNSSEYI------VEHLAYLNRDFGIRHVFFYDDLFTADRGR 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                    A+   V+ N    +E     V+       +++G  +++ G++S + + ++ 
Sbjct: 264 VARFCQLKEARRLPVTYNCIARLE----HVDAELLALLKRSGCWQVNFGIESGDPEVIKK 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             + +   E    + + R    R+    +  LP ++       +  AL   +D +++ + 
Sbjct: 320 HRKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIRRTIDYALMLPLDEINVTKF 379

Query: 208 TIEKGTLFY---KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           T   G   Y   +   + D   P  N    ++     + +       E   + F+     
Sbjct: 380 TPFPGAPIYGGIREQGEFDENWPLMNCMNFVF-----VPTGMSRDQLEELYNEFIRRFYR 434

Query: 265 HNLNYWRYGDYI 276
               +W Y   +
Sbjct: 435 RTRIHWGYTQML 446


>gi|61657454|emb|CAI44366.1| hypothetical protein [Thermotoga sp. SG1]
          Length = 404

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 20  GVYVHWP---FCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSI 71
           G+Y+       C   C YC   S   +    ++     ++ +  +   + + +   P S 
Sbjct: 138 GIYMPIEITRGCPFSCAYCQTPSLAGKRVRHRDVDVILHYARLGVERNRKLARFIAPNSF 197

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGV 130
                 G TP++   + I  +L G+ K             E  P SV     +  +K   
Sbjct: 198 GYGSRNGVTPNV---EKIEELLYGLKKVGVEEIYFGTFPSEVRPESVTDEVLKVVKKYVK 254

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           NR I +G QS  ++ L+ + R H   +   AI            D I+  P +T    EM
Sbjct: 255 NRSIVIGSQSGSDRILKIIKRGHTVEQVEEAIEKIAFHGFTPHVDFIFGFPFETKEDIEM 314

Query: 190 ELQ---RALSYAVDHLSLYQLTIEKGTLFYK-------MHKDGDLVLPSENVAVDLYNLT 239
                 R +      +  +      GT  ++             L   +    +D Y L 
Sbjct: 315 TFNFITRIVERYGAKIHAHTFMPLPGTELFRAGPGRLTKDHYRFLGRLASKGILDGYWLK 374

Query: 240 QSITSAHGLHAYEI 253
           Q   S      YEI
Sbjct: 375 QETLS---RKVYEI 385


>gi|295096597|emb|CBK85687.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPADDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +      +  ++  I        +      ++P     +    YR     V+ + L +Q
Sbjct: 213 GTTGSFAELLRLVAAIDGI-----DRIRFTTSHPMEFTDDIIDVYRDTPELVSFLHLPIQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  +GR H   E  + I   R   P +  S D I   P +T   +E  ++    
Sbjct: 268 CGSDRVLNLMGRPHTVLEYKSTIRKLREARPDIQISSDFIVGFPGETADDFERTMKLIGE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDVSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAN 374


>gi|296103382|ref|YP_003613528.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057841|gb|ADF62579.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPADDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +      +  ++  I        +      ++P     +    YR     V+ + L +Q
Sbjct: 213 GTTGSFAELLRLVAAIDGI-----DRIRFTTSHPMEFTDDIIDVYRDTPELVSFLHLPIQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  +GR H   E  + I   R   P +  S D I   P +T   +E  ++    
Sbjct: 268 CGSDRVLNLMGRPHTVLEYKSTIRKLREARPDIQISSDFIVGFPGETADDFERTMKLIGE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDVSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAN 374


>gi|261341274|ref|ZP_05969132.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316579|gb|EFC55517.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Enterobacter cancerogenus
           ATCC 35316]
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                    L E+  +    G R ++ +      + G    
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPADDILFEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +      +  ++  I        +      ++P     +    YR     V+ + L +Q
Sbjct: 213 GTTGSFAELLRLVAAIDGI-----DRIRFTTSHPMEFTDDIIDVYRDTPELVSFLHLPIQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  +GR H   E  + I   R   P +  S D I   P +T   +E  ++    
Sbjct: 268 CGSDRVLNLMGRPHTVLEYKSTIRKLREARPDIQISSDFIVGFPGETADDFERTMKLIGE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDVSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAN 374


>gi|325959709|ref|YP_004291175.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325331141|gb|ADZ10203.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 476

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 85/237 (35%), Gaps = 22/237 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C YC   S +   K  +    ++ + E++   +L     ++ I F   T  ++   
Sbjct: 203 CVYNCGYCS--SSLIMGKKFRSRSPENVVDEIE---ELVYNYHLNDIAFMDDTF-MLNKN 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A I D I +      +V     +    V  +     + AG+N I  GV+S  ++ L  
Sbjct: 257 RAASIADEIKERNL---DVSFVASSRVDMVNQDLLFKLKNAGMNTIYYGVESGSQRILNL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  N  +A  A+  A+N    +    I   P +T       ++ ++    D+     L
Sbjct: 314 MKKGINLKQAENAVKNAKNAGLEVLTSYIIGYPGETQNDMNETIKFSIKLEPDYCQYSIL 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLY-------------NLTQSITSAHGLHAY 251
           T   GT  Y   KD DL+         +              ++ +   +   L  Y
Sbjct: 374 TPFPGTPIYHDLKDKDLIKTENWEKYTVMKPILNYEKLGLNKDMIERNLARAYLKFY 430


>gi|256845665|ref|ZP_05551123.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256719224|gb|EEU32779.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 297

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 78/215 (36%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCSFCS----MYKDKKFVIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L+F
Sbjct: 85  LIQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDEALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQEGKYDYMEGIEVLKEMKLI 239


>gi|255319762|ref|ZP_05360967.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
           radioresistens SK82]
 gi|262380296|ref|ZP_06073450.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
           radioresistens SH164]
 gi|255303081|gb|EET82293.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
           radioresistens SK82]
 gi|262297742|gb|EEY85657.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
           radioresistens SH164]
          Length = 485

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 67/195 (34%), Gaps = 18/195 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTP--SL 83
           C  YC F              +   L E+  + +  G R I+ +      + G T   ++
Sbjct: 194 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREINLLGQNVNGYRGETFEGTI 252

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               ++  ++  I     V         ++P     +  Q YR     V+ + L VQS  
Sbjct: 253 CTFADLLRLVAEIPGIGRVRYTT-----SHPLEFNDDLIQCYRDLPQMVSHLHLPVQSGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + RNH     I  I   R + P   +S D I   P +T   +E   Q       
Sbjct: 308 NDVLQAMKRNHTIDVYIEKIAKLRKVRPDMHLSSDFIIGFPGETDQNFEETYQFIQEMDF 367

Query: 200 DHLSLYQLTIEKGTL 214
           DH   +  +   GT 
Sbjct: 368 DHSYSFIYSKRPGTP 382


>gi|16764047|ref|NP_459662.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167550789|ref|ZP_02344545.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167990681|ref|ZP_02571781.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231688|ref|ZP_02656746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236659|ref|ZP_02661717.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168240521|ref|ZP_02665453.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168264394|ref|ZP_02686367.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465849|ref|ZP_02699731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168820202|ref|ZP_02832202.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194446753|ref|YP_002039914.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450672|ref|YP_002044705.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194471594|ref|ZP_03077578.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194734184|ref|YP_002113781.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197248340|ref|YP_002145647.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197263845|ref|ZP_03163919.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|198245491|ref|YP_002214659.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200391054|ref|ZP_03217665.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204930519|ref|ZP_03221449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|213425074|ref|ZP_03357824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213583025|ref|ZP_03364851.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213647865|ref|ZP_03377918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213859100|ref|ZP_03385071.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|238911620|ref|ZP_04655457.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289825599|ref|ZP_06544785.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|81549773|sp|Q9RCI2|MIAB_SALTY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890639|sp|B5EZB2|MIAB_SALA4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890643|sp|B5FNB2|MIAB_SALDC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890646|sp|B4TB74|MIAB_SALHS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890647|sp|B4SYN0|MIAB_SALNS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890660|sp|B4TPZ0|MIAB_SALSV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890665|sp|Q8Z8G5|MIAB_SALTI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890668|sp|A9MUH8|MIAB_SALPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890674|sp|Q57RQ7|MIAB_SALCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|6523483|emb|CAB62263.1| MiaB protein [Salmonella typhimurium]
 gi|16419184|gb|AAL19621.1| methylthiolation of isopentenylated A37 derivatives in rRNA
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|194405416|gb|ACF65638.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194408976|gb|ACF69195.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194457958|gb|EDX46797.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194709686|gb|ACF88907.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195632043|gb|EDX50563.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197212043|gb|ACH49440.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197242100|gb|EDY24720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197290335|gb|EDY29691.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197940007|gb|ACH77340.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199603499|gb|EDZ02045.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204320453|gb|EDZ05656.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205324195|gb|EDZ12034.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205330871|gb|EDZ17635.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334151|gb|EDZ20915.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339926|gb|EDZ26690.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343227|gb|EDZ29991.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347114|gb|EDZ33745.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|261245942|emb|CBG23744.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992407|gb|ACY87292.1| rRNA modification protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157270|emb|CBW16758.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911702|dbj|BAJ35676.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321226251|gb|EFX51302.1| tRNA-i(6)A37 methylthiotransferase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322613204|gb|EFY10147.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621272|gb|EFY18129.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322623692|gb|EFY20530.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322628964|gb|EFY25743.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322631686|gb|EFY28440.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322637578|gb|EFY34280.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641918|gb|EFY38548.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322646762|gb|EFY43268.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651463|gb|EFY47843.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322653086|gb|EFY49420.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658807|gb|EFY55062.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322664924|gb|EFY61117.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322668926|gb|EFY65078.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322670568|gb|EFY66701.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322675309|gb|EFY71385.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682220|gb|EFY78245.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322684951|gb|EFY80948.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323128987|gb|ADX16417.1| rRNA modification protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323193991|gb|EFZ79193.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197917|gb|EFZ83039.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323202036|gb|EFZ87096.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323207169|gb|EFZ92122.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323210924|gb|EFZ95787.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323214304|gb|EFZ99055.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323219291|gb|EGA03782.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225498|gb|EGA09728.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323231057|gb|EGA15173.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234111|gb|EGA18200.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238194|gb|EGA22252.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323242572|gb|EGA26596.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248451|gb|EGA32385.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251334|gb|EGA35206.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259262|gb|EGA42905.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323262137|gb|EGA45699.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264851|gb|EGA48352.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323272312|gb|EGA55719.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326622414|gb|EGE28759.1| rRNA modification protein [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332987614|gb|AEF06597.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhimurium str. UK-1]
          Length = 474

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|325123551|gb|ADY83074.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 483

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 64/195 (32%), Gaps = 18/195 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTP--SL 83
           C  YC F              +   L E+  + +  G R IS +      + G T   S+
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGSI 250

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I     +         ++P        Q Y      V+ + L VQS  
Sbjct: 251 CTFPELLRLVAEIPGIGRLRYTT-----SHPLEFSDELIQCYEDLPQMVSHLHLPVQSGS 305

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ       
Sbjct: 306 NDVLQAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKDLDF 365

Query: 200 DHLSLYQLTIEKGTL 214
           DH   +  +   GT 
Sbjct: 366 DHSYSFVYSKRPGTP 380


>gi|303233012|ref|ZP_07319691.1| histone acetyltransferase, ELP3 family [Atopobium vaginae
           PB189-T1-4]
 gi|302480883|gb|EFL43964.1| histone acetyltransferase, ELP3 family [Atopobium vaginae
           PB189-T1-4]
          Length = 671

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 3/129 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P ++  +N +  R  G  ++ +G+Q L +       R     +   A  L R
Sbjct: 298 VGLVIETRPDTITADNLRLMRALGATKVQMGIQVLNQHIRSINHRRGTREDIDRAFALLR 357

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++    +  L   T    + + +  +S   Y  D + LY   +       +  +  
Sbjct: 358 LFGFKIHVHAMVNLMGSTPALDKDDFRELVSDVRYLPDEVKLYPCVLVSSAHLCRCFQTQ 417

Query: 223 DLVLPSENV 231
                +   
Sbjct: 418 AWQAYTPEE 426


>gi|158320587|ref|YP_001513094.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii
           OhILAs]
 gi|229890436|sp|A8MFD5|MIAB_ALKOO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|158140786|gb|ABW19098.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii
           OhILAs]
          Length = 471

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++    L    +      G        +L
Sbjct: 188 CNNFCTYC-----IVPYTRGRERS-REVADIIREATDLANNGTKEITLLGQNVNSYGKTL 241

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L  + K   +       + ++P  +         +         L  QS  
Sbjct: 242 EHPIDFADLLRALNKIDGIERIRF--MTSHPKDLSERLIDAIAECDKVCEHFHLPFQSGS 299

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q L+ + R +     ++ +   ++  P +    D+I   P +T   ++  L        
Sbjct: 300 NQILKAMNRKYTKENYLSIVKKLKDRIPNIGLTTDIIVGFPGETEEDFQDTLDIVQEARY 359

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    +  +I +GT   KM    D
Sbjct: 360 DSAYTFLYSIREGTPAAKMQNQID 383


>gi|332532467|ref|ZP_08408345.1| tRNA-i(6)A37 methylthiotransferase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038110|gb|EGI74557.1| tRNA-i(6)A37 methylthiotransferase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 482

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 22/262 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K   YC F              +   L E+  +
Sbjct: 134 IEKFDRLPEPKADGP-SAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPVDDVLLEVAQL 189

Query: 63  RQLTGPRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
            +  G R +     ++    G         I    D I     +     I     +P   
Sbjct: 190 AEQ-GVREVNLLGQNVNAYRGDT---HDGEICYFSDLIRLIAAIDGIDRIRYTTSHPVEF 245

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-- 173
             +    Y      V+ + L VQS  ++ L  + R H A E  + I   R I P +S   
Sbjct: 246 TPDIIDVYADVPELVDHLHLPVQSGSDRILNLMKRGHTAIEYKSTIRKLRKIRPNLSMSS 305

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P ++   +E  ++       D    +  +   GT    +       +  +    
Sbjct: 306 DFIIGFPGESKEDFEATMKLISDIGFDMSFSFIYSARPGTPAADLPD----DVTEQEKKE 361

Query: 234 DLYNLTQSITSAHGLHAYEISN 255
            LY L   IT      + ++ +
Sbjct: 362 RLYLLQNRITQMAQQISRQMFD 383


>gi|270294431|ref|ZP_06200633.1| TIGR01212 family radical SAM protein [Bacteroides sp. D20]
 gi|317481038|ref|ZP_07940117.1| TIGR01212 family radical SAM protein [Bacteroides sp. 4_1_36]
 gi|270275898|gb|EFA21758.1| TIGR01212 family radical SAM protein [Bacteroides sp. D20]
 gi|316902751|gb|EFV24626.1| TIGR01212 family radical SAM protein [Bacteroides sp. 4_1_36]
          Length = 309

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 9/219 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +  E +++  
Sbjct: 46  CTYCN-NQTFNPDYCRTEKSITRQLEEGKQFFAHKYPEMKYLAYFQAYTNTYGELEDLKR 104

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +           V + I   P  +     +  +   +     +  G++S ++++L  +
Sbjct: 105 KYEEALSA---DGVVGLVIGTRPDCMPDSLLDYLEEMNRHTFLLVEYGIESTDDKTLCRI 161

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H    A  A+    +        +I  LP +T      +        +  L ++QL 
Sbjct: 162 NRGHTFHAAADAVERTASRGILTGGHVILGLPGETHESIVAQAGVLSRLPLTTLKMHQLQ 221

Query: 209 IEKGTLFY--KMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT           D  L   +  +DL          
Sbjct: 222 LIRGTRMALEYRQHPEDFHLFGVDEYIDLVIDYIEHLRP 260


>gi|240139472|ref|YP_002963947.1| MiaB-like tRNA modifying enzyme, putative 2-methylthioadenine
           synthetase [Methylobacterium extorquens AM1]
 gi|240009444|gb|ACS40670.1| MiaB-like tRNA modifying enzyme, putative 2-methylthioadenine
           synthetase [Methylobacterium extorquens AM1]
          Length = 410

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V     +      ++   +      +    +G    S + 
Sbjct: 139 CDHRCTFCVIPFG-RGNSRSVPVAEAVAQVRRIVEHGGREVVLTGVDLTAYGRDLDSDLS 197

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +   IL  +     +  +   ++EA     +      + +    +  + L +Q+ ++
Sbjct: 198 LGRLVRTILAKVPDLARLRLSSIDSVEA-----DAELIAAFAEEPRLMPHVHLSLQAGDD 252

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H+ ++AI      R++        DLI   P +T  Q+   L       + 
Sbjct: 253 LILKRMKRRHSRADAIRLCQTLRDLRPGLVFGADLIAGFPTETEAQFARSLDLVAECGLT 312

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           HL ++  +    T   +M 
Sbjct: 313 HLHVFPYSPRPDTPAARMP 331


>gi|291436223|ref|ZP_06575613.1| radical SAM domain-containing protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291339118|gb|EFE66074.1| radical SAM domain-containing protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 470

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C       +  V +++  +S    +  M +L     +  I F     +L    
Sbjct: 207 CPFKCSFC------FKQAVDKKSMYRSPEDVVGEMTELKERWGVKEIMFYDDVFTL---- 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +           V          V     +    AG  R+  G++  + + L  
Sbjct: 257 HRGRVREICGLIGETGLKVRWEAPTRVDLVPEPLLEAMAGAGCVRLRFGIEHGDSEILER 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+  A     +     I     +T  Q+   +  A    +D+ S Y  
Sbjct: 317 MRKESDIQKIEKAVTSAHEAGIKGFGYFIVGWLGETREQFRRTVDLACRLPLDYASFYTA 376

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 377 TPLPGTPLH 385


>gi|78223619|ref|YP_385366.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78194874|gb|ABB32641.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 475

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 103/295 (34%), Gaps = 37/295 (12%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  KC YC     F+    R +  Q  +  ++  +  +  MR+L+      +        
Sbjct: 206 CPSKCIYCLWPQTFSGRAMRTRSPQNVYEEVKWIVDNIPEMRELSFDDDTFTADRKHAR- 264

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                       +  AK   +  +  I   AN         +  R+AG+  + +G ++  
Sbjct: 265 ------------EVAAKLKPLGISWTINARANCDY---ETLKIMREAGLRHVVVGYETGN 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           EQ L+ + +     +AI      + +   +    I  LP +T       ++ A +  ++ 
Sbjct: 310 EQILKNIKKGVTKEQAIEFTRNCKKLGLSVHGAFIMGLPGETRDTIRETIEYAKALDLNS 369

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           +     +   GT F+ + +              + +    +   +  H   +SN     A
Sbjct: 370 IQASLASPYPGTEFWDLCRQEG----WIASEAYIDDTGHQMCVINYPH---LSNKEIFDA 422

Query: 262 ESL-HNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEKHPESWLKMVRKNGHA 314
             L +N  Y+R   YIG      S +K +        + K  + +L+ +RK   A
Sbjct: 423 VELFYNKFYFRPK-YIG-----RSIMKMIVDGEERKKLLKEGKQYLEYMRKRKAA 471


>gi|220929616|ref|YP_002506525.1| hypothetical protein Ccel_2203 [Clostridium cellulolyticum H10]
 gi|219999944|gb|ACL76545.1| conserved hypothetical protein [Clostridium cellulolyticum H10]
          Length = 314

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 35/230 (15%)

Query: 32  CPYCD----------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C +C               V +       +I                  I   +F   + 
Sbjct: 41  CIFCGEEGAGFENLSCTMSVSQQLAKNARYIG-----------KNYGSDIFIAYFQNYSN 89

Query: 82  SLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY----RKAGVNR-ISL 135
           + +  +     I +   +       V + I   P  +     +      ++ GV+  I L
Sbjct: 90  TYLPFEEFKKNIYEACRE-----GIVAVYISTRPDCISDRYMELLADIKKEKGVDIVIEL 144

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++   SL+ L R H  +E I A+   +N         I  LP   +       +   
Sbjct: 145 GLQTVNYNSLKILQRGHTLAEFIDAVVRIKNYDLEACAHYITDLPTDNIEDVIEGAKILS 204

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +  V  +  + L I K T+  KM+  G +V  + +      + T +    
Sbjct: 205 ALGVQQVKCHSLYILKDTVLEKMYSQGKIVPVTMDE---FIDRTIAFLEY 251


>gi|299133084|ref|ZP_07026279.1| MiaB-like tRNA modifying enzyme [Afipia sp. 1NLS2]
 gi|298593221|gb|EFI53421.1| MiaB-like tRNA modifying enzyme [Afipia sp. 1NLS2]
          Length = 417

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 27/207 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + +    ++ +R+L        +  G    S    +
Sbjct: 148 CDHRCTFC-----IIPYGRGNSRSV-AMGAAVEQVRKLVEGGCPEIVLTGVDITSYGADL 201

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRISL 135
                    +  IL  + +   +  +   ++EA+   ++               +  + L
Sbjct: 202 PGAPKLGALVKQILKHVPELKRLRLSSIDSVEADRDLLDVIADDERL-------MPHLHL 254

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +Q+ ++  L+ + R H+ ++AIA    AR + P +    DLI   P +T   +E  L  
Sbjct: 255 SLQAGDDLVLKRMKRRHSRADAIAFCDQARRLRPDIAFGADLIAGFPTETDDMFERSLAL 314

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                +  L ++  +   GT   KM +
Sbjct: 315 VEDCDLTFLHVFPYSKRPGTPAAKMPQ 341


>gi|310815234|ref|YP_003963198.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Ketogulonicigenium vulgare Y25]
 gi|308753969|gb|ADO41898.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Ketogulonicigenium vulgare Y25]
          Length = 440

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +     ++    Q      +  I   G   +    Q
Sbjct: 162 CDKFCAFC-----VVPYTRGSE--VSRPADKIIAEAQGLVEAGVREITLLGQNVNAWHGQ 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               + D + +   +     I     +P+ +  +    + +    +  + L VQS  ++ 
Sbjct: 215 GAEGLGDLVRRLARIDGLARIRYTTSHPNDMADDLIAAHAEEEKLMPYLHLPVQSGSDRI 274

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H A + +  I   R   P +  S D I   P +T   +E  LQ          
Sbjct: 275 LKAMNRKHTAEQYLRLIERIRAARPDIVLSSDFIVGFPGETDQDFEDTLQLCAEVGFGAS 334

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++ +   GT   +  +    +L +    +    + Q   S   +
Sbjct: 335 FSFKYSARPGTPAAEKPELPPALLDARLQRLQAQIIAQQNASLASM 380


>gi|304439709|ref|ZP_07399609.1| radical SAM protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371815|gb|EFM25421.1| radical SAM protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 305

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 75/203 (36%), Gaps = 8/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        ++  + +  +     +  +          + +    T + +E +N   
Sbjct: 42  CIFCG--EEGGSFENREGSIKEQVQKNIAHIEDRYNAHKFIA-YIQNYTATYMELENFKK 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
            ++   K       V + I A P  +     +  +   +  +  + +G+Q+    +L  +
Sbjct: 99  TIEEAVKASER--IVGVNISARPDFLTDGHLDYLEKLNEKYMVTLEVGLQTPNYHTLVKI 156

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  S+ I A+   +    R+S  LI  LP                  VD + ++ L 
Sbjct: 157 NRGHLLSDYIDAVQRIKRRGLRISTHLILNLPYDDDLDAIESANIISVLEVDEVKVHALY 216

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           I KGT   +M+ +G++ L S+  
Sbjct: 217 ILKGTKLGQMYLNGEVELISKEE 239


>gi|300814768|ref|ZP_07095016.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511155|gb|EFK38407.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 288

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 78/215 (36%), Gaps = 10/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    ++ +        ++    ++  M Q         IF   G   +++ 
Sbjct: 25  CAHNKCSFC----YMYKDDNFIIRPLEDIKKDLIEMSQY--GSYWRRIFLADGDALVLKT 78

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            ++  IL  I + +  +          + +   +      R AG+  + +G +S +++ L
Sbjct: 79  SDLLEILKTIKQYYPNIERVSSYATAGDINRKSIEELTALRDAGLEMLYIGFESGDDEIL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           R + +     + ++A+   + +  + S  +I  L          +   +       D++S
Sbjct: 139 RKINKGLTYKDYVSAMAKCKEVGFKTSITIIAGLGGVELMEQNAKGTAKIISETKPDYVS 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              + I K T  Y  + +G   +P+    +    +
Sbjct: 199 YLTMRIYKNTPLYLDYINGKFNMPNAEEILQEMKI 233


>gi|284173807|ref|ZP_06387776.1| histone acetyltransferase, ELP3 family protein [Sulfolobus
           solfataricus 98/2]
 gi|261602089|gb|ACX91692.1| histone acetyltransferase, ELP3 family [Sulfolobus solfataricus
           98/2]
          Length = 473

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 6/169 (3%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
            V +TIE  P   +  +     + G  ++ LGVQ++ +  L+F  R H   ++I +  + 
Sbjct: 140 CVGMTIETKPDWAKEWHADQMLRLGATKVELGVQTVYDDILKFTNRGHTVKDSIESTRIL 199

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           ++   ++ + ++  LPK    +       +    ++  D L +Y   + +      + K 
Sbjct: 200 KDSGFKVVYHIMLGLPKSDPDKDLEAFKTIFSDPNFRPDMLKIYPTLVVETAPLVNLWKR 259

Query: 222 GDLVLPSENVAVDLYNLTQSITSAH---GLHAYEISNHSFLGAESLHNL 267
           G          VDL +                 +I  +  L      NL
Sbjct: 260 GLYRPYDTETLVDLISEMYKYIPKWVRVMRIQRDIPANVILDGNKKGNL 308


>gi|167752159|ref|ZP_02424286.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
 gi|167660400|gb|EDS04530.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
          Length = 433

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   +        +   I   + E + +    G R I       G       +
Sbjct: 153 CDYKCAYC---TIHYARGASRNMPIADLVKEAEQIAA-AGQREIVITGINTGDFGRTTGE 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               +L  + +   +      +IE  P+ +          +    +   + +QS  +  L
Sbjct: 209 RFIDLLRALNEVEGIERYRISSIE--PNLLTDEIIAFCASSPKFQHHFHIPLQSGSDSVL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R +   +    I   R + P   +  D+I   P +T + +    +     A  +L 
Sbjct: 267 ARMRRRYTTEKFAERIEAVRRLMPDAFIGIDVIVGFPGETESDFRTTYEFLERLAPAYLH 326

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 327 IFPFSERPGTP 337


>gi|156934828|ref|YP_001438744.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cronobacter
           sakazakii ATCC BAA-894]
 gi|229890546|sp|A7MQS5|MIAB_ENTS8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|156533082|gb|ABU77908.1| hypothetical protein ESA_02675 [Cronobacter sakazakii ATCC BAA-894]
          Length = 474

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 77/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +          L   Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDIVLEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNMMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETQQDFEQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IAEVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|317151835|ref|YP_004119883.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942086|gb|ADU61137.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 289

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 81/225 (36%), Gaps = 13/225 (5%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C   ++  +    ++   ++ + ++ +  +    +    +  G     ++  
Sbjct: 25  CSHGKCAFCG--AYQGKRFGIKDR--ETVVRDIAFAARHCRRQRRVFLCDGDAM--ILPQ 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  IL  I +     + V     A    S         R  G+  + +G++S ++  L
Sbjct: 79  PRLLEILADIRRELPWVTRVGTYASAKSLRSKSDAQLAELRAMGLGIVYMGLESGDDMVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
             +G+N N++  +     AR    +++  +I  L     ++           +   D + 
Sbjct: 139 AAMGKNGNSATIVEQGRRARQAGFKLNVTVINGLGGVEGSLAHARATATALNAMDPDQIG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              L +  GT  +  H  G+ VLP  +  +      + + +   L
Sbjct: 199 ALSLMLVPGTPLHARHARGEFVLPDAHGMLAE---IREMLAGLHL 240


>gi|16127914|ref|NP_422478.1| hypothetical protein CC_3684 [Caulobacter crescentus CB15]
 gi|221236734|ref|YP_002519171.1| tRNA 2-methylthioadenosine synthase-like protein [Caulobacter
           crescentus NA1000]
 gi|13425446|gb|AAK25646.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220965907|gb|ACL97263.1| tRNA 2-methylthioadenosine synthase-like protein [Caulobacter
           crescentus NA1000]
          Length = 443

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 74/236 (31%), Gaps = 27/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGG---GT 80
           C  +C +C            +       + +++ +        + +      +G    G 
Sbjct: 169 CDHRCTFC---IIPYGRGNSRSAPAGEVVEQVRKLAAEGYREVVLTGVDVTSWGADLPGQ 225

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLG 136
           P+L   Q +  IL  +     +  +     E +P              Y       + L 
Sbjct: 226 PTL--GQLVGRILRMVPDLPRLRLSSIDAAEIDPDLFKLLETEPRLMPY-------LHLS 276

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRA 194
           +Q+ +   L+ + R H+  +A+  +   R + P      DLI   P +T   +E  L+  
Sbjct: 277 LQAGDNLILKRMKRRHSREDALKLVAEVRRVRPDTAFGADLIAGFPTETDEAFENTLKLV 336

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               +  L ++  +   GT   +M          ++ A  L    Q     H    
Sbjct: 337 EEAGLAFLHVFPYSARPGTPAARMPPVK--GPVIKDRARRLREAGQRGLERHLQRQ 390


>gi|226944171|ref|YP_002799244.1| MoaA, NifB, PqqE, radical SAM superfamily protein [Azotobacter
           vinelandii DJ]
 gi|226719098|gb|ACO78269.1| MoaA, NifB, PqqE, radical SAM superfamily protein [Azotobacter
           vinelandii DJ]
          Length = 470

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 87/252 (34%), Gaps = 17/252 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   V  ++    +   S + E +W+++      +  + F   T +  +  
Sbjct: 201 CRSKCTFCLWPQTVGGHRYRVRS-AASVIAEAKWIKENMP--EVKELMFDDDTFT--DTS 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N+  + +       +        +AN   V   + +  ++ G+  + +G +S ++Q L  
Sbjct: 256 NLERVHEIARGLHALGWTWSCNAKAN---VPYESLKIMKENGLRLLLVGYESGDDQILHN 312

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T       ++ A       + +   
Sbjct: 313 IKKGLRTDIARKFTENCHKLGIQVHGTFILGLPGETKETIAKTIEFAKEINPHTVQVSLA 372

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY---EISNHSFLGAESL 264
               GT  Y+   +   + P+++  +      Q   +          EI +    G E+ 
Sbjct: 373 APYPGTTLYRQAVESGWLEPNQDANLVNDKGVQ--LALISYPHLSKEEIYH----GVETF 426

Query: 265 HNLNYWRYGDYI 276
           +   Y+R     
Sbjct: 427 YRNFYFRPSKIW 438


>gi|326567673|gb|EGE17779.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Moraxella
           catarrhalis BC1]
          Length = 349

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 72/215 (33%), Gaps = 16/215 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F              +   L E+  + +  G R ++ +      + G      +
Sbjct: 61  CSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQ-GVREVNLLGQNVNGYRGEK----D 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +  + Y+     V+ + L +QS   
Sbjct: 116 DGSICRFSELLHYVSYIDGIERIRYTTSHPLEFTDDIIEAYQSIDKLVSHLHLPIQSGSN 175

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L  + RNH     +  I   R I P   +S D I   P +T   +   LQ A     D
Sbjct: 176 QVLAAMKRNHTVDVYMNQIAKLRKIRPDLHLSSDFIIGFPGETDEDFLQTLQFAKDLDFD 235

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           H   +  +   GT    +  D  L    + +AV  
Sbjct: 236 HSYSFIYSKRPGTPASDLPDDVSLETKKQRLAVFQ 270


>gi|148265614|ref|YP_001232320.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146399114|gb|ABQ27747.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 472

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 85/251 (33%), Gaps = 23/251 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C   C YCD +   R ++     +I   L  +           I  +FF     +     
Sbjct: 210 CPYNCSYCDRSVFSRGFRFNSPAYIFEHLKYLHR------DFGIRHVFFYDDLFTFDRNR 263

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +  +L  +     V+ N    +E     V+       +K+G  +++ GV+S + + L
Sbjct: 264 VEELCRLL--VDSRLPVTYNCIARLE----HVDCELVGLLKKSGCWQVNFGVESGDPEIL 317

Query: 146 RFLGRNHNASEAIAAIH----LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +     H    A+ A+     +  +   R+    +  LP +  T     +  AL+  +D 
Sbjct: 318 KK----HRKYMALDAVQQKLRMVGDAGMRVKGLFMVGLPGEDETAIRRTIDYALTLPLDE 373

Query: 202 LSLYQLTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           +++ + T   G   Y+ + + G+       +    +       +   L            
Sbjct: 374 INVTKFTPFPGAPIYRNIREQGEFNEEWPAMNCMNFVFIPHGMTKAQLEDLYNEFIRRFY 433

Query: 261 AESLHNLNYWR 271
             S  +  Y R
Sbjct: 434 RRSRIHWGYTR 444


>gi|261492918|ref|ZP_05989464.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261311459|gb|EEY12616.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 475

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  +    G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     +         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRLRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGSDRVLTMMKRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKV 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  +       E ++     +       
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQF 375


>gi|254362260|ref|ZP_04978374.1| 2-methylthioadenine synthase [Mannheimia haemolytica PHL213]
 gi|261496732|ref|ZP_05993107.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153093835|gb|EDN74770.1| 2-methylthioadenine synthase [Mannheimia haemolytica PHL213]
 gi|261307571|gb|EEY08899.1| 2-methylthioadenine synthase [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 475

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  +    G R ++ +           F 
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGETFD 211

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I     +         ++P     +  + YR     V+ + L
Sbjct: 212 GGICTF---AELLRLVAAIDGIDRLRYTT-----SHPIEFTDDIIEVYRDTPELVSFLHL 263

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 264 PIQSGSDRVLTMMKRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKV 323

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    +  +       E ++     +       
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQF 375


>gi|150004542|ref|YP_001299286.1| hypothetical protein BVU_1992 [Bacteroides vulgatus ATCC 8482]
 gi|254882720|ref|ZP_05255430.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|149932966|gb|ABR39664.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254835513|gb|EET15822.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 320

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 29/202 (14%)

Query: 32  CPYCD---FN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C YC+   FN        S  ++ + G+  F++ +  EM+++            +F   T
Sbjct: 57  CTYCNNQTFNPAYCHTGKSVAQQLEEGKRFFVRKY-PEMKYLA-----------YFQAYT 104

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGV 137
            +      +  +     +   V   V + I   P  + ++        G      +  G+
Sbjct: 105 NTY---GELEELKRKYEEALMVEDVVGLVIGTRPDCMPISLLDYLEDLGKRTFVLVEYGI 161

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S ++++LR + R H  + +  A+         +   +I  LP +       +       
Sbjct: 162 ESTDDETLRRINRGHTFAVSAEAVRKTAERGILVGGHIILGLPGEEREMLIRQAGVLSQL 221

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
            +  L L+QL + KGT     +
Sbjct: 222 PLTTLKLHQLQLIKGTRMASEY 243


>gi|299136873|ref|ZP_07030056.1| RNA modification enzyme, MiaB family [Acidobacterium sp. MP5ACTX8]
 gi|298601388|gb|EFI57543.1| RNA modification enzyme, MiaB family [Acidobacterium sp. MP5ACTX8]
          Length = 472

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 15/202 (7%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
              C K C YC     V  Y  G+E   ++  + +   +++           G    S +
Sbjct: 165 IEGCDKFCSYC-----VVPYTRGKERS-RTSASVLAEAQRIAQMGFTEIQLLGQNVNSYL 218

Query: 85  EP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           +P   ++ A +L  + +   +      T  ++P     +            + + L VQS
Sbjct: 219 DPSGKRSFAELLAAVGEVNGIKRVRFTT--SHPRDFTKDIVDAIDAVPTLCDHVHLPVQS 276

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                LR + R++     +  I   +     +S   D+I   P +T   +E  +    + 
Sbjct: 277 GSTDVLRAMQRDYTRDWYLERIAWTKAARRDISLTSDIIVGFPGETDRDFEDTITLLETV 336

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D +  ++ +    T    MH
Sbjct: 337 GYDAIYGFKYSPRPNTPAIHMH 358


>gi|261855784|ref|YP_003263067.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus
           neapolitanus c2]
 gi|261836253|gb|ACX96020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus
           neapolitanus c2]
          Length = 482

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 69/224 (30%), Gaps = 18/224 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G    +  
Sbjct: 181 CSKYCSFCVVPYTRGEEISRPFDDVIAEVAELAEQ-GVREVNLLGQNVNAYRGV---MHD 236

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             IA +   I     + S   I     +P        + YR        + L VQ   ++
Sbjct: 237 GQIADLALLIEYIARIDSIGRIRFTTSHPVEFTDRLIEAYRNVPKLAAYLHLPVQVGSDR 296

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H   E  A +   +A      +S D I   P +T   +E  ++       DH
Sbjct: 297 ILALMKRGHTVIEYKAKLRKLMAARPGISLSSDFIIGFPGETEEDFEATMKLVTDMHFDH 356

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D     P       L+ L   IT+ 
Sbjct: 357 SFSFIYSARPGTPAASLPDDQ----PEAVKKARLHRLQAQITAQ 396


>gi|319779782|ref|YP_004139258.1| RNA modification enzyme, MiaB family [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165670|gb|ADV09208.1| RNA modification enzyme, MiaB family [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 469

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 14/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + E + + +  G R ++    ++    G    
Sbjct: 187 CDKFCTFC---VVPYTRGSEVSRPVAQIVAEAERLAE-AGVREVTLLGQNVNAWHGQGEN 242

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  +L  +A+   ++     T  ++P  ++      +R     +  + L VQS  
Sbjct: 243 GHEWGLGRLLFRLAEIPGLARLRYTT--SHPRDMDDELIAAHRDLPSLMPYLHLPVQSGS 300

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A + +A +   R   P ++   D I   P +T   +E  ++       
Sbjct: 301 DRILKAMNRRHTARDYLALLDRIRTARPDIALSGDFIVGFPGETEADFEATMELVRQVNY 360

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
                ++ +   GT   +M   
Sbjct: 361 ASAFSFKYSPRPGTPGAEMADH 382


>gi|149186851|ref|ZP_01865161.1| hypothetical protein ED21_25472 [Erythrobacter sp. SD-21]
 gi|148829518|gb|EDL47959.1| hypothetical protein ED21_25472 [Erythrobacter sp. SD-21]
          Length = 391

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C   C +C      +     +   +   L E++          + +      +G   P  
Sbjct: 122 CDHACTFC---VIPQGRGKSRSLTVAEVLREVESHLDTGAGEVVLTGVDVTSWGHDLPGS 178

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +    +   +LD       +  +    IE     V+   F+ +      +  I L +Q  
Sbjct: 179 LRLGALIRAVLDAFPALTRIRMSSIDGIE-----VDEELFELFAGEPRVMPHIHLSLQHG 233

Query: 141 EEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H  ++A+  +    A      +  DLI   P +T       L      A
Sbjct: 234 HDLILKRMKRRHLRADAVDLVARLKACRPDLVVGADLIAGFPTETEEHHASNLSIIRELA 293

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + H  ++  +   GT   +M +
Sbjct: 294 ILHGHIFPYSPRPGTPAARMPQ 315


>gi|261868524|ref|YP_003256446.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413856|gb|ACX83227.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 474

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPVDDILFEIAQLAEQ-GVREVNLLGQNVNAYRGPTF- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +     +     +     +P     +    YR     V+ + L VQS  
Sbjct: 212 -DGDICTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DHVLNMMKRGHTAIEYKSIIRKLKAVRPHIQVSSDFIVGFPGETNEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 331 DMSFSFIYSARPGTP 345


>gi|289578160|ref|YP_003476787.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289527873|gb|ADD02225.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 562

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 88/278 (31%), Gaps = 50/278 (17%)

Query: 28  CVKKCPYC----DFNS----HVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGG 78
           C  KC YC    D N      + + +   + F+   +  ++ + R     R         
Sbjct: 181 CPFKCAYCLSSID-NKLRYESIEKVEKDLKWFVDRGVKILKLIDRSFNANRK-------- 231

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGV 137
                   + I  I+        +  +     E NP  V+    +  +      +  +GV
Sbjct: 232 ------RAKEILNIMK------KIGGDTVFHCEVNPELVDEEFIEELKGLEKRIQFEVGV 279

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+  + SL+ + R     +++  I L +    ++  DLI  LP+ +   +        + 
Sbjct: 280 QTTNKNSLKKISRTTAVEKSLRGIKLLKEAGIKLHVDLIAGLPEDSFETFSKAFDDVYNL 339

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVL---PSENVAVDLYNLTQS--ITSAHGL--HA 250
             D + L  L + KGT   +  ++  +V    P   V        Q   I        + 
Sbjct: 340 KPDEIQLGFLKVLKGTPLKRKVEEFKIVYDSKPPYEVLYTKDISYQELVILKGIAFLLNK 399

Query: 251 YEISNHSFLGAESLHN------------LNYWRYGDYI 276
           Y  S       E L N              YW+    +
Sbjct: 400 YYNSGKFKKTLEYLENKFKRPFDFYLEFYKYWKENKLL 437


>gi|229890678|sp|Q3IK75|MIAB_PSEHT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 482

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 22/262 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K   YC F              +   L E+  +
Sbjct: 134 IEKFDRLPEPKADGP-SAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPVDDVLLEIAQL 189

Query: 63  RQLTGPRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
            + +  R +     ++    G         I    D I     +     I     +P   
Sbjct: 190 AEQS-VREVNLLGQNVNAYRGDT---HDGEICYFSDLIRLIAAIDGIDRIRYTTSHPVEF 245

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-- 173
             +    Y      V+ + L VQS  ++ L  + R H A E  + I   R I P +S   
Sbjct: 246 TQDIVDVYADVPELVDHLHLPVQSGSDRILNLMKRGHTAIEYKSTIRKLRKIRPNLSMSS 305

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P +T   +E  ++       D    +  +   GT    +       +  +    
Sbjct: 306 DFIIGFPGETQDDFEATMKLISDVGFDMSFSFIYSARPGTPAADLPD----DVTEQEKKE 361

Query: 234 DLYNLTQSITSAHGLHAYEISN 255
            LY L   IT      + ++ +
Sbjct: 362 RLYLLQNRITQMAQQISRQMFD 383


>gi|77359992|ref|YP_339567.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874903|emb|CAI86124.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 469

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 22/262 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K   YC F              +   L E+  +
Sbjct: 121 IEKFDRLPEPKADGP-SAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPVDDVLLEIAQL 176

Query: 63  RQLTGPRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
            + +  R +     ++    G         I    D I     +     I     +P   
Sbjct: 177 AEQS-VREVNLLGQNVNAYRGDT---HDGEICYFSDLIRLIAAIDGIDRIRYTTSHPVEF 232

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-- 173
             +    Y      V+ + L VQS  ++ L  + R H A E  + I   R I P +S   
Sbjct: 233 TQDIVDVYADVPELVDHLHLPVQSGSDRILNLMKRGHTAIEYKSTIRKLRKIRPNLSMSS 292

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P +T   +E  ++       D    +  +   GT    +       +  +    
Sbjct: 293 DFIIGFPGETQDDFEATMKLISDVGFDMSFSFIYSARPGTPAADLPD----DVTEQEKKE 348

Query: 234 DLYNLTQSITSAHGLHAYEISN 255
            LY L   IT      + ++ +
Sbjct: 349 RLYLLQNRITQMAQQISRQMFD 370


>gi|313904016|ref|ZP_07837396.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
 gi|313471165|gb|EFR66487.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
          Length = 453

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C YC            +   ++  L E + +        I         G    L 
Sbjct: 154 CDRHCTYCA---IPDMRGPYRSVPMEDLLEEARGLAADGVKELILVAQETTLYGTD--LY 208

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             + + ++L  + K   +       +   P  +     Q  ++     + + + +Q   +
Sbjct: 209 NEKRLHILLKELCKIEDIHWIR--VLYCYPEEIYPELIQTMKEEPKICHYMDIPIQHAND 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  + ++ +  ++  R   P ++    LI   P +T  Q+E           D
Sbjct: 267 EILKKMGRKTSRADLVRVVNTLRQEIPDIAIRTTLITGFPGETEAQFEDVCDFIREMKFD 326

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L ++  + E+GT   +M    D  +  +     +
Sbjct: 327 RLGVFTYSCEEGTAAARMDGQIDEEVMKDRQDALM 361


>gi|293390538|ref|ZP_06634872.1| lipoyl synthase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951072|gb|EFE01191.1| lipoyl synthase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 474

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPVDDILFEIAQLAEQ-GVREVNLLGQNVNAYRGPTF- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +     +     +     +P     +    YR     V+ + L VQS  
Sbjct: 212 -DGDICTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DHVLNMMKRGHTAIEYKSIIRKLKAVRPHIQVSSDFIVGFPGETNEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 331 DMSFSFIYSARPGTP 345


>gi|315652268|ref|ZP_07905260.1| TIGR01212 family radical SAM protein [Eubacterium saburreum DSM
           3986]
 gi|315485391|gb|EFU75781.1| TIGR01212 family radical SAM protein [Eubacterium saburreum DSM
           3986]
          Length = 297

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 7/200 (3%)

Query: 35  CDFNSHVRRYKVGQENF-IQSFLTEMQWM--RQLTGPRSISSIFFGGGTPSLIEP-QNIA 90
           C F S     +   +   I   +   + +  ++      I+   +     S      +I 
Sbjct: 39  CSFCSEKGSGEFAIDVMDIDEQIERAKMLISKKFPNSIKINDRRYIAYFQSFSNTYGDIK 98

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRF 147
            +L    +       V ++I   P         G  K    +   I LG+Q++ E + R 
Sbjct: 99  RLLSLFERAINKDDIVALSIATRPDCFCKEMLNGLEKLNKIKPVWIELGLQTVNEATARA 158

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             R +            +     +   +I  LP ++       ++      +D + ++ L
Sbjct: 159 FNRGYTLDIFEKTYDELKKRNFEVIVHMILGLPGESEEDMYATVKYLSKKHIDGIKIHGL 218

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            I KGT     ++     + 
Sbjct: 219 HILKGTRIAIEYEKSPFKIM 238


>gi|323698793|ref|ZP_08110705.1| Radical SAM domain protein [Desulfovibrio sp. ND132]
 gi|323458725|gb|EGB14590.1| Radical SAM domain protein [Desulfovibrio desulfuricans ND132]
          Length = 465

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 19/182 (10%)

Query: 28  CVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C +C  N        RR      + I+  + ++           +  ++F     +
Sbjct: 211 CPFHCGFCSVNRFFEGRWARRSPGNVADEIERLIEDL----------HVRHLYFSDDLFT 260

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L    +   +L    +  T   +     E     V+        KAG  RI  GV+S   
Sbjct: 261 L----DRERVLALCKEIITRKLHFVWMAETRVDLVDEELLGWMYKAGCYRIYYGVESGSP 316

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + L+   +     +   A  L           L+   P +        ++         +
Sbjct: 317 RVLKAANKGFTVEQVRRAFALTHEAAMEPCCFLMVGNPGENPETIGETVELIREIRPATM 376

Query: 203 SL 204
            +
Sbjct: 377 PI 378


>gi|145635209|ref|ZP_01790913.1| uracil-DNA glycosylase [Haemophilus influenzae PittAA]
 gi|145267488|gb|EDK07488.1| uracil-DNA glycosylase [Haemophilus influenzae PittAA]
          Length = 474

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETSEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|71652696|ref|XP_814999.1| acetyltransferase [Trypanosoma cruzi strain CL Brener]
 gi|70880021|gb|EAN93148.1| acetyltransferase, putative [Trypanosoma cruzi]
          Length = 669

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 44/267 (16%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ +      + Q     S             +  
Sbjct: 186 CPKDCHYCPNQPGIARSYLLKEPGVLRGYRNGWDPISQFYDRASALENNGHVVDKIELII 245

Query: 77  GGGTPSLIE---PQNIA----------------LILDGIAKNWTVSSN-----VEITIEA 112
            GGT S       +                     +  + +  T + +     + +T+E 
Sbjct: 246 LGGTFSFYPKKYAEEFIAGSFYAANTYYDSAPLRPMQSLQEEITFNEDARCRVIGVTVET 305

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +  +  + +R  GV R+ LGVQ L++  L  + R    ++ I  I    +   ++ 
Sbjct: 306 RPDYINASELRRFRCLGVTRVQLGVQHLDDDILTIVNRECPTAKTILGIKRLLDAGFKVD 365

Query: 173 FDLIYALPKQTMTQWEMELQRALSYA-----VDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +  LP  +  +     +   S       VD   +Y       T   K+ +     L 
Sbjct: 366 AHWMPDLPGSSYKKDREMFEYLFSLDNENFQVDQWKVYPTATVPYT---KIEEWHRKGLY 422

Query: 228 SENVAVDLYNLTQSITSAHG-LHAYEI 253
                VD       +         Y I
Sbjct: 423 KPYAEVDDGAWMVKLLVYIMEQCPYRI 449


>gi|319643974|ref|ZP_07998549.1| hypothetical protein HMPREF9011_04152 [Bacteroides sp. 3_1_40A]
 gi|317384498|gb|EFV65465.1| hypothetical protein HMPREF9011_04152 [Bacteroides sp. 3_1_40A]
          Length = 308

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 29/202 (14%)

Query: 32  CPYCD---FN--------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C YC+   FN        S  ++ + G+  F++ +  EM+++            +F   T
Sbjct: 45  CTYCNNQTFNPAYCHTGKSVAQQLEEGKRFFVRKY-PEMKYLA-----------YFQAYT 92

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGV 137
            +      +  +     +   V   V + I   P  + ++        G      +  G+
Sbjct: 93  NTY---GELEELKRKYEEALMVEDVVGLVIGTRPDCMPISLLDYLEDLGKRTFVLVEYGI 149

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S ++++LR + R H  + +  A+         +   +I  LP +       +       
Sbjct: 150 ESTDDETLRRINRGHTFAVSAEAVRKTAERGILVGGHIILGLPGEEREMLIRQAGVLSQL 209

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
            +  L L+QL + KGT     +
Sbjct: 210 PLTTLKLHQLQLIKGTRMASEY 231


>gi|124023692|ref|YP_001017999.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Prochlorococcus marinus str. MIT 9303]
 gi|229890600|sp|A2CB74|MIAB_PROM3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123963978|gb|ABM78734.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9303]
          Length = 480

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +++  +V+  + C ++C YC   S   + +      I+  +  +      
Sbjct: 158 LEDLTTARRDSTICAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLEIEGLAAR--- 214

Query: 66  TGPRSISSI-----FFGGGTPSLIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
            G R I+ +      +G   P +    +    + D +     V     I     +P    
Sbjct: 215 -GFREITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHIHDVEGIERIRFATSHPRYFT 273

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
               +             +  QS +   L+ + R +        ++  R + P   +S D
Sbjct: 274 ERLIEACFDLPKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELMPDAAISTD 333

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +I A P +T  Q++  L        D ++    +    T 
Sbjct: 334 VIVAFPGETDAQFQNTLNLVEEVGFDQVNTAAYSPRPNTP 373


>gi|50086159|ref|YP_047669.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           sp. ADP1]
 gi|81392304|sp|Q6F7W8|MIAB_ACIAD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|49532135|emb|CAG69847.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter sp.
           ADP1]
          Length = 483

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 66/198 (33%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +++   +      T  ++P        Q YR     V+ + L VQ
Sbjct: 251 CTF------PELLRLVSEIPGIGRLRYTT--SHPLEFSEELIQCYRDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +E   Q    
Sbjct: 303 SGSNAVLQAMKRNHTIDVYIEKIAKLRKIRPDMHLSSDFIIGFPGETEQNFEETYQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFIYSKRPGTP 380


>gi|332342008|gb|AEE55342.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli UMNK88]
          Length = 474

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|323976357|gb|EGB71447.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TW10509]
          Length = 474

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|331268841|ref|YP_004395333.1| radical SAM domain-containing protein [Clostridium botulinum
           BKT015925]
 gi|329125391|gb|AEB75336.1| radical SAM domain protein [Clostridium botulinum BKT015925]
          Length = 348

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 16/196 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC    FN  V RY++  +  I S     +            +    GG  + 
Sbjct: 61  YCKNTCTYCGIRVFNKKVDRYRLSLDEIIHSCSEGYRL--------GYRTFVLQGGEDNY 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I  N+      E  I  +       +++ Y  AG +R  L  ++  ++
Sbjct: 113 FTDDKIVKIVTKIKLNFP-----ECAITLSIGEKSYESYKKYYNAGADRYLLRHETASKK 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L    +       +   + I  ++    +  +P QT   +  +L          + 
Sbjct: 168 IYEKLHPGMSFENRRKCLRNLKEIGYQVGAGFMIGIPGQTNEDYAEDLLFLKELEPHMVG 227

Query: 204 LYQLTIEKGTLFYKMH 219
           +     +  T   K  
Sbjct: 228 IGPFIPQCDTPLGKEQ 243


>gi|307635179|gb|ADI86171.2| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase [Geobacter sulfurreducens KN400]
          Length = 472

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 88/252 (34%), Gaps = 18/252 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YCD +   R ++     +I      ++ +  L     I  +FF     +    +
Sbjct: 210 CPYQCSYCDRSVFSRGFRFNSPEYI------VEHLAYLNRDFGIRHVFFYDDLFTADRGR 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                    A+   V+ N    +E     V+       +++G  +++ G++S + + ++ 
Sbjct: 264 VARFCQLKEARRLPVTYNCIARLE----HVDAELLALLKRSGCWQVNFGIESGDPEVIKK 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             + +   E    + + R    R+    +  LP ++       +  AL   +D +++ + 
Sbjct: 320 HRKYYGLDEVQTKLAMVRRAGMRVKGLFMLGLPGESAESIRRTIDYALMLPLDEINVTKF 379

Query: 208 TIEKGTLFY---KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           T   G   Y   +   + D   P  N    ++     + +       E   + F+     
Sbjct: 380 TPFPGAPIYGGIREQGEFDENWPLMNCMNFVF-----VPTGMSRDQLEELYNEFIRRFYR 434

Query: 265 HNLNYWRYGDYI 276
               +W Y   +
Sbjct: 435 RTRIHWGYTQML 446


>gi|225872143|ref|YP_002753598.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidobacterium capsulatum
           ATCC 51196]
 gi|225791726|gb|ACO31816.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidobacterium capsulatum
           ATCC 51196]
          Length = 448

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 11/199 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
              C K C YC     V  Y  G+E   +S     +  R      +   +  G    S  
Sbjct: 162 IEGCDKFCAYC-----VVPYTRGKERSRKSSSVLAEARRMAEAGYTEIQL-LGQNVNSYH 215

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +P+      + +A    V   V +     +P     +  +         + + L +QS  
Sbjct: 216 DPEGKKSFAELLAAVGEVPGIVRVRFTTSHPRDFTRDIVEAIDAVPALCDHVHLPIQSGS 275

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  I   +     +S   D+I   P +T   +E  +  A     
Sbjct: 276 SRVLQLMQREYTREQYLEKISWIKTARRPISMTTDMIVGFPGETPDDFEETITLAAEVQY 335

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D +  ++ +    T    M
Sbjct: 336 DGIFAFKYSPRPNTPAIHM 354


>gi|312892260|ref|ZP_07751756.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
 gi|311295235|gb|EFQ72408.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
          Length = 316

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 8/209 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ +S          +  +  +  M+  R          I+F   T +      + +
Sbjct: 54  CTYCNVDSFTPSVSRDNPSIREQVIKGMERARNGNKADKFI-IYFQPNTNTYAPTHYLKM 112

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRF 147
           + D         + V +++   P  ++        ++  +R    + +G++S+   +L  
Sbjct: 113 LYDEALSIEP-ENIVGLSVGTRPDCIDAEKI-ALLESYTDRFDVDLEMGMESIYNDTLGQ 170

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQ 206
           + R     E I  + L  N    +    I+  P +T             +  +  +  + 
Sbjct: 171 INRGCTHDELIKTLALLENSKLDVCVHTIFGFPWETKQMMLAYADEINRFPQIKFVKFHH 230

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           L I +G++    +K     L S     D 
Sbjct: 231 LHIVEGSIMGVKYKREPFKLFSLPEYADF 259


>gi|289805405|ref|ZP_06536034.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 261

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 39  CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 94

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 95  GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 146

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 147 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 206

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 207 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 256


>gi|197103594|ref|YP_002128971.1| 2-methylthioadenine synthetase [Phenylobacterium zucineum HLK1]
 gi|196477014|gb|ACG76542.1| 2-methylthioadenine synthetase [Phenylobacterium zucineum HLK1]
          Length = 465

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 74/207 (35%), Gaps = 27/207 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---------- 77
           C  +C +C     +  Y  G      +    ++ +R+L G      +  G          
Sbjct: 187 CDHRCTFC-----IIPYGRGNSRSAPA-GEVVEQVRRLAGEGYQEVVLTGVDVTSWGADL 240

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
            G P+L   Q +  IL        +          + + ++ +  +   +    +  + L
Sbjct: 241 PGAPTL--GQLVGRILKLAPGLPRLR-----LSSIDAAEIDADLLRLLAEEPRLMPYLHL 293

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +Q+ ++  L+ + R H+ ++A+  +    A         DLI   P +T   +E  L+ 
Sbjct: 294 SLQAGDDMILKRMKRRHSRADALRLVADVRAVRPDVAFGADLIAGFPTETDEMFENTLRL 353

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                +  L ++  +   GT   +M +
Sbjct: 354 VEEAGLAFLHVFPFSPRPGTPAARMPQ 380


>gi|160947755|ref|ZP_02094922.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
 gi|158446889|gb|EDP23884.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
          Length = 443

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 84/257 (32%), Gaps = 19/257 (7%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +   R  +        +   ++          I+ I  G      ++
Sbjct: 160 CNMFCTYC----IIPYARGPIKSRPIDDIYEEAVKLANNGYKEVIITGIHVGSYG---LD 212

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             N   ++D I K  T+ +   I +       +  +     +          L +QS  +
Sbjct: 213 LGNDTRLIDVIEKLSTIENLDRIRLSSIEAGIISEDFLIRLKNCKKVCEHFHLSLQSGCD 272

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R + A      + + + IFP ++   D+I   P +    ++  L         
Sbjct: 273 KILKLMNRRYTADMYRKKVRMIKEIFPNVALTTDIIVGFPGENDEDFQETLNFVKEIGFS 332

Query: 201 HLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            + +++ +  KGT    F +          S  + +   ++T           +E+    
Sbjct: 333 KIHVFKYSKRKGTPAFDFKEQVDGNVKKFRSNELILLAKDMTTEFLKKELSEKHEVLFEE 392

Query: 258 FLGAESL--HNLNYWRY 272
            +    L  +  NY R+
Sbjct: 393 NINGNRLVGYTRNYIRF 409


>gi|320654434|gb|EFX22481.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
          Length = 474

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|317129126|ref|YP_004095408.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474074|gb|ADU30677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cellulosilyticus
           DSM 2522]
          Length = 516

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 74/206 (35%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C K C YC     +  Y  G+E   +     ++ +R L           G    +    L
Sbjct: 228 CDKFCTYC-----IVPYTRGKERS-RRPEDIIEEVRHLARNGYKEITLLGQNVNAYGKDL 281

Query: 84  IEPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           ++    +  ++D I K   +         ++P   + +  +   K G  V  I L VQS 
Sbjct: 282 VDMDYGLGDLMDEIRK---IDIPRVRFTTSHPKDFDDHLIEVLAKGGNLVEHIHLPVQSG 338

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +   E +      +   P  SF  D+I   P +T  Q+E  L       
Sbjct: 339 NSDVLKLMARKYTREEYVTLAKKIKEAIPHASFTTDIIVGFPNETDAQFEDTLSLVREME 398

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL 224
            D    Y  +  +GT   KM+ +  +
Sbjct: 399 YDSAYTYVYSPREGTPAAKMNDNIPM 424


>gi|307545979|ref|YP_003898458.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Halomonas elongata DSM 2581]
 gi|307218003|emb|CBV43273.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Halomonas elongata DSM 2581]
          Length = 447

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 77/222 (34%), Gaps = 12/222 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F               ++ + E+  +    G R I     ++    G   L + 
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPFEAVMDEVIHLADQ-GVREINLLGQNVNAYRGENQLGDE 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A ++  +A    +      T  ++P     +  + Y +    V+ + L VQ+  +  
Sbjct: 216 IDLAELISCVAAVDGIDRIRFTT--SHPVEFSDSLIEAYGEIPELVSHLHLPVQAGSDNV 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E +  +   R + P +SF  D I   P +T   +E  +        D  
Sbjct: 274 LAAMKRGHTVEEYVDKLERIRALRPDISFSSDFIIGFPGETEADFESTMDLIHRIGFDVS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +  +   GT    +  +    +  + +A+    + Q    
Sbjct: 334 FSFVYSARPGTPAAALPDETPEAVKKQRLAILQERINQQAMQ 375


>gi|222151135|ref|YP_002560289.1| tRNA-i(6)A37 modification enzyme MiaB [Macrococcus caseolyticus
           JCSC5402]
 gi|222120258|dbj|BAH17593.1| tRNA-i(6)A37 modification enzyme MiaB [Macrococcus caseolyticus
           JCSC5402]
          Length = 509

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 81/237 (34%), Gaps = 29/237 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQE------NFIQSFLTEMQWMRQLTG--PRSISSIFFG 77
           C K C YC   F     R ++ +E      +  +    E+  + Q      + I  + +G
Sbjct: 220 CDKFCTYCIVPFTRGKERSRMPEEIIAEVRDLARRGYKEICLLGQNVNAYGKDIDGLNYG 279

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
            G         +A I          ++       ++P   +    +     G  V  I L
Sbjct: 280 LG-------DLLADIQKIDIPRVRFTT-------SHPWDFDDRLIEVIAAGGNIVPHIHL 325

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS   + L+ +GR ++    +  +   +   P ++   D+I   P +T  Q++  L  
Sbjct: 326 PVQSGNNEVLKIMGRKYSRESYLELVGKIKAAMPEVALTTDIIVGYPNETEEQFQETLSL 385

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               A DH   Y  +  +GT   KM  +  +    + +      L    T     H 
Sbjct: 386 YEEVAFDHAYTYLYSPREGTPAAKMEDNVPMREKKDRLQRLN-KLVGDYTERALSHY 441


>gi|154254048|ref|YP_001414872.1| RNA modification protein [Parvibaculum lavamentivorans DS-1]
 gi|229890586|sp|A7HZ82|MIAB_PARL1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|154157998|gb|ABS65215.1| RNA modification enzyme, MiaB family [Parvibaculum lavamentivorans
           DS-1]
          Length = 467

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 22/231 (9%)

Query: 28  CVKKCPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C         F+  V R      + + + + E+  + Q              G
Sbjct: 177 CDKFCTFCVVPYTRGSEFSRPVARILDEARSLVDAGVREITLLGQNVNAW---HGEDQAG 233

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P       +  ++  +A+   ++     T  ++P  ++      +R     +  + L V
Sbjct: 234 RP-----ATLGYLIRALAEIEGLARLRYTT--SHPRDMDEELIAAHRDVPALMPYLHLPV 286

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L  + R H+A      I   R   P +  S D I   P +T   +E  L    
Sbjct: 287 QSGSDRILAAMNRRHDADSYHRIIGRIRAAKPDIALSSDFIVGFPGETEADFEATLDLIR 346

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +        ++ +   GT            + SE +      L +   + +
Sbjct: 347 TVGFAQAYSFKYSPRPGTPAATEEDQVPEEVKSERLQRLQALLGEQQLAFN 397


>gi|16271994|ref|NP_438192.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           influenzae Rd KW20]
 gi|145629127|ref|ZP_01784926.1| lipoyl synthase [Haemophilus influenzae 22.1-21]
 gi|145630690|ref|ZP_01786469.1| lipoyl synthase [Haemophilus influenzae R3021]
 gi|145636777|ref|ZP_01792443.1| lipoyl synthase [Haemophilus influenzae PittHH]
 gi|145639692|ref|ZP_01795295.1| lipoyl synthase [Haemophilus influenzae PittII]
 gi|148827177|ref|YP_001291930.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           influenzae PittGG]
 gi|229845365|ref|ZP_04465496.1| hypothetical protein CGSHi6P18H1_00417 [Haemophilus influenzae
           6P18H1]
 gi|260580677|ref|ZP_05848504.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus influenzae
           RdAW]
 gi|319896441|ref|YP_004134634.1| isopentenyl-adenosine a37 tRNA methylthiolase [Haemophilus
           influenzae F3031]
 gi|2501533|sp|Q57163|MIAB_HAEIN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890551|sp|A5UFJ1|MIAB_HAEIG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|1572963|gb|AAC21697.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|144978630|gb|EDJ88353.1| lipoyl synthase [Haemophilus influenzae 22.1-21]
 gi|144983816|gb|EDJ91266.1| lipoyl synthase [Haemophilus influenzae R3021]
 gi|145270075|gb|EDK10012.1| lipoyl synthase [Haemophilus influenzae PittHH]
 gi|145271249|gb|EDK11163.1| lipoyl synthase [Haemophilus influenzae PittII]
 gi|148718419|gb|ABQ99546.1| hypothetical protein CGSHiGG_02565 [Haemophilus influenzae PittGG]
 gi|229811673|gb|EEP47371.1| hypothetical protein CGSHi6P18H1_00417 [Haemophilus influenzae
           6P18H1]
 gi|260092739|gb|EEW76675.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus influenzae
           RdAW]
 gi|301168620|emb|CBW28210.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
           influenzae 10810]
 gi|309750662|gb|ADO80646.1| 2-methylthioadenine synthetase (MiaB) [Haemophilus influenzae
           R2866]
 gi|317431943|emb|CBY80291.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
           influenzae F3031]
          Length = 474

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|294508608|ref|YP_003572667.1| 2-methylthioadenine synthetase [Salinibacter ruber M8]
 gi|294344937|emb|CBH25715.1| 2-methylthioadenine synthetase [Salinibacter ruber M8]
          Length = 613

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 31/260 (11%)

Query: 15  GSNSLGVYVHWP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----- 67
            SN +  YV      C   C +C            +   + + L+E+  + +        
Sbjct: 294 DSNGVSAYVSI-MRGCDNMCTFC---VVPFTRGREESRPVTTILSEVARLAEEGYKEVTL 349

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
             ++++S  +     + +    +      + +   VS  + +     +P     +  + +
Sbjct: 350 LGQNVNSYHYTDADGTSVSFAEL------VDRVSRVSPEMRVRYSTSHPKDCTDDLLKVH 403

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
           R      N I L VQ    + L  + R +   E +A    A+ + P +S   DLI     
Sbjct: 404 RDRPNVCNYIHLPVQHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCG 463

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T  Q E  L        DH  +++ +    T   + ++D                  + 
Sbjct: 464 ETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAARKYEDDVP-------EDTKQRRLEE 516

Query: 242 ITSAHGLHAYEISNHSFLGA 261
           I      HA E SN + +G 
Sbjct: 517 IIELQNQHAKE-SNEAEVGR 535


>gi|86607496|ref|YP_476259.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. JA-3-3Ab]
 gi|123504633|sp|Q2JQX6|MIAB_SYNJA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|86556038|gb|ABD00996.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp.
           JA-3-3Ab]
          Length = 453

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C ++C YC            Q    Q+   E++ + +  G R ++ +          L  
Sbjct: 155 CNERCTYC---IVPLVRGREQSRQPQAIRAEIEDVAR-AGYREVTLLGQNIDAYGRDLDP 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             N+A +L  +     +      T  ++P            +         +  Q+  + 
Sbjct: 211 KTNLASLLRFVHSVEGIERIRFAT--SHPRYFTEELIATCAELPKVCEHFHIPFQAGSDA 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +        I L R   P   +S D I   P +T  Q++  LQ       D 
Sbjct: 269 VLKRMRRGYTQERYRQLIQLIRQYMPEATISADAIVGFPGETEAQFQETLQLVQDIGFDF 328

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
           L+    +   GT   +    
Sbjct: 329 LNTAAYSPRPGTPAAEWPDQ 348


>gi|257464485|ref|ZP_05628857.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 107

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 49  ENFIQSFLTEMQWMRQLT--GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106
           E + Q    ++++ RQ +      +  +FFGGGTP++   + +  IL  + KN+  S++ 
Sbjct: 11  EEYHQYLCQQIEYYRQFSFCQSSDLDVVFFGGGTPTIYSHRQLQNILQCLQKNFHFSTSY 70

Query: 107 EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           E+T E    ++ V   +  ++  VNR+S+G+Q+L
Sbjct: 71  EMTFETTLHNLGVEKAKLLQENAVNRLSVGIQTL 104


>gi|190893801|ref|YP_001980343.1| methylase (RNA modification enzyme), MiaB family [Rhizobium etli
           CIAT 652]
 gi|190699080|gb|ACE93165.1| putative methylase protein (RNA modification enzyme), MiaB family
           [Rhizobium etli CIAT 652]
          Length = 423

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 88/234 (37%), Gaps = 29/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGG---GT 80
           C  +C +C            +   + + + + + +            + +  +GG   G 
Sbjct: 147 CDHRCTFC---IIPYGRGNSRSVPMGAVVDQARRLADSGYREIVLTGVDATSYGGDLPGA 203

Query: 81  PSL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           P+L  +    +  I D       +SS   I  +A+   +  +  +         + L +Q
Sbjct: 204 PTLGVLAKTLLKQIPDIRR--LRLSSIDSIEADAHLMDLIADEPRFM-----PHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H  ++A+  I  AR + P MSF  D+I   P +T   ++  ++ A  
Sbjct: 257 HGDDMILKRMKRRHLRADALRFIAEARRLRPEMSFGADMIAGFPTETEEMFDNAVRLAEE 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             + HL ++  +   GT   +M        P  + ++      +   + H LH 
Sbjct: 317 AGIAHLHVFPYSARPGTPAARM--------PQLDRSLVKDRAARLRATGHRLHQ 362


>gi|170741367|ref|YP_001770022.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Methylobacterium sp. 4-46]
 gi|229890618|sp|B0UNY0|MIAB_METS4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|168195641|gb|ACA17588.1| RNA modification enzyme, MiaB family [Methylobacterium sp. 4-46]
          Length = 447

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              +   L E + +    G R ++ I      F G  P 
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRPVAKILAEAERLAA-GGARELTLIGQNVNAFHGEGPD 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P ++  ++  +A+   ++     T  ++P  ++ +    +R     +  + L VQS 
Sbjct: 213 G-RPWSLGRLMRRLAEVPGIARLRYTT--SHPRDMDDDLIAAHRDCPAVMPYLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H+A      I   R   P ++   D I   P +T       ++      
Sbjct: 270 SDRILAAMNRRHDADTYRRLIDRIRAARPDIALTSDFIVGFPGETDADHAETMRLVAEIG 329

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 330 FSGAFSFKYSPRPGTP 345


>gi|145633424|ref|ZP_01789154.1| lipoyl synthase [Haemophilus influenzae 3655]
 gi|319774971|ref|YP_004137459.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
           influenzae F3047]
 gi|329123127|ref|ZP_08251697.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus aegyptius
           ATCC 11116]
 gi|144985987|gb|EDJ92589.1| lipoyl synthase [Haemophilus influenzae 3655]
 gi|317449562|emb|CBY85767.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
           influenzae F3047]
 gi|327471682|gb|EGF17124.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus aegyptius
           ATCC 11116]
          Length = 474

 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|295094926|emb|CBK84017.1| radical SAM protein, TIGR01212 family [Coprococcus sp. ART55/1]
          Length = 292

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 71/206 (34%), Gaps = 21/206 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFF 76
           C  +        C +C             E+ + S   +++  ++    +        +F
Sbjct: 29  CPNRDGKAGTGGCIFCS----ASGSGDFSEDAVMSIDEQIELAKKRISGKCKCDRYIAYF 84

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +     ++  + +             ++I + P           +     +   I
Sbjct: 85  QSYTNTY---GDVDALREKFLAAARRDDVAAVSIASRPDCFGPEVIDMIKDIIAVKPVWI 141

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q+  +++ + + R ++ S     ++  R +   +   +I  LP +T       ++ 
Sbjct: 142 ELGLQTANDRTAQLINRCYDISVYDETMNRLRELGVHIIVHMIIGLPGETKEDMIDTVRY 201

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
            +    + + L  L + +GT+  KM+
Sbjct: 202 IVRSGANGIKLQLLHVLRGTVLEKMY 227


>gi|189425283|ref|YP_001952460.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ]
 gi|189421542|gb|ACD95940.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ]
          Length = 442

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 74/227 (32%), Gaps = 12/227 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     + R         +      + +        ++ I  G     L  P 
Sbjct: 157 CETGCSYC--IVPIARGPSRSVPPPEVLEAVSRLVASGYQEVVLTGIHMGAYGLDLSPPG 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++  ++  +     V      +IE  P+ +       ++K+    + + + +QS  +  L
Sbjct: 215 SLTALVQQLEDQNVVPRLRLGSIE--PNELTDELLTLFKKSSRLCHHLHIPLQSGSDSVL 272

Query: 146 RFLGRNHN----ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           + +GR +N    A+  + A  L  + F  ++ DLI   P +T  ++        S  +  
Sbjct: 273 QRMGRGYNTSFYANRIVTAAQLLPDAF--IAADLIAGFPGETEQEFSETCNFVTSLPLAD 330

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           L ++  +   GT    M       +  E              +    
Sbjct: 331 LHVFPYSTRPGTKAAAMSGHLKPAIIKERAEHLRGIAADKRAAFQHR 377


>gi|327398341|ref|YP_004339210.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411]
 gi|327180970|gb|AEA33151.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411]
          Length = 410

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 16/219 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   S +R  +  +E      L+E++ + +      + +   G    S  + +
Sbjct: 138 CNNHCTYC-IISFLRGRERDKEK--DKVLSEIESLAKAGFSEIVLT---GTNIGSYRDLK 191

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSLR 146
            +   +D +  ++ V           P  V+             N + + +QS   + L+
Sbjct: 192 GLLRDIDALEGDFRVR-----ISSIEPMYVDKEFIDIVASGRFANHLHIPLQSGSNKILK 246

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +GRN+        ++        +  D+I     +T   +E          + +  ++ 
Sbjct: 247 LMGRNYKREHYEKIVNYCHKKGVFVGCDIIVGFFGETDELFEETYWFVKRLPLSYAHVFS 306

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +    T  Y +     L LP   V        + +   
Sbjct: 307 YSKRPNTPAYNL----KLDLPKGPVVRQRNRKLRELFEQ 341


>gi|323170787|gb|EFZ56437.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli LT-68]
 gi|332096864|gb|EGJ01854.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           155-74]
          Length = 453

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 136 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 191

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 192 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 246

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 247 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 306

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 307 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 353


>gi|218688478|ref|YP_002396690.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli ED1a]
 gi|293408786|ref|ZP_06652625.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B354]
 gi|306812915|ref|ZP_07447108.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli NC101]
 gi|331645818|ref|ZP_08346921.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M605]
 gi|229890523|sp|B7MPH7|MIAB_ECO81 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|218426042|emb|CAR06859.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           ED1a]
 gi|222032414|emb|CAP75153.1| UPF0004 protein yleA [Escherichia coli LF82]
 gi|291471964|gb|EFF14447.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B354]
 gi|305853678|gb|EFM54117.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli NC101]
 gi|312945201|gb|ADR26028.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|320194162|gb|EFW68794.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli WV_060327]
 gi|323191295|gb|EFZ76559.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli RN587/1]
 gi|330910419|gb|EGH38929.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli AA86]
 gi|331044570|gb|EGI16697.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M605]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|15829953|ref|NP_308726.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. Sakai]
 gi|16128644|ref|NP_415194.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|26246637|ref|NP_752677.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli CFT073]
 gi|82775938|ref|YP_402285.1| hypothetical protein SDY_0597 [Shigella dysenteriae Sd197]
 gi|89107530|ref|AP_001310.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K-12 substr. W3110]
 gi|110640883|ref|YP_668611.1| MiaB protein [Escherichia coli 536]
 gi|157157673|ref|YP_001461833.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E24377A]
 gi|157160149|ref|YP_001457467.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli HS]
 gi|168752231|ref|ZP_02777253.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4113]
 gi|168758304|ref|ZP_02783311.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4401]
 gi|168764662|ref|ZP_02789669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4501]
 gi|168767108|ref|ZP_02792115.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4486]
 gi|168777598|ref|ZP_02802605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4196]
 gi|168779152|ref|ZP_02804159.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4076]
 gi|168786511|ref|ZP_02811518.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC869]
 gi|168802429|ref|ZP_02827436.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC508]
 gi|170020982|ref|YP_001725936.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli ATCC
           8739]
 gi|170080341|ref|YP_001729661.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170679912|ref|YP_001742780.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli SMS-3-5]
 gi|188492519|ref|ZP_02999789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 53638]
 gi|191173977|ref|ZP_03035495.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli F11]
 gi|193063365|ref|ZP_03044455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E22]
 gi|193069098|ref|ZP_03050056.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E110019]
 gi|194429753|ref|ZP_03062269.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B171]
 gi|194434466|ref|ZP_03066727.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1012]
 gi|194439882|ref|ZP_03071945.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 101-1]
 gi|195939398|ref|ZP_03084780.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808891|ref|ZP_03251228.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4206]
 gi|208814878|ref|ZP_03256057.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4045]
 gi|208823289|ref|ZP_03263607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4042]
 gi|209395752|ref|YP_002269297.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4115]
 gi|217324477|ref|ZP_03440561.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. TW14588]
 gi|218549762|ref|YP_002383553.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           fergusonii ATCC 35469]
 gi|218553203|ref|YP_002386116.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli IAI1]
 gi|218694100|ref|YP_002401767.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           55989]
 gi|218699025|ref|YP_002406654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli IAI39]
 gi|218703994|ref|YP_002411513.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli UMN026]
 gi|227884364|ref|ZP_04002169.1| 2-methylthioadenine synthase [Escherichia coli 83972]
 gi|238899938|ref|YP_002925734.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           BW2952]
 gi|253774355|ref|YP_003037186.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160740|ref|YP_003043848.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli B str. REL606]
 gi|254791824|ref|YP_003076661.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. TW14359]
 gi|256020613|ref|ZP_05434478.1| isopentenyl-adenosine A37 tRNA methylthiolase [Shigella sp. D9]
 gi|256023728|ref|ZP_05437593.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia sp.
           4_1_40B]
 gi|260842887|ref|YP_003220665.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O103:H2 str. 12009]
 gi|260853912|ref|YP_003227803.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O26:H11 str. 11368]
 gi|260866809|ref|YP_003233211.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O111:H- str. 11128]
 gi|261224129|ref|ZP_05938410.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257823|ref|ZP_05950356.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281610|ref|YP_003498428.1| hypothetical protein G2583_0824 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403922|ref|ZP_06647916.1| RNA modification enzyme [Escherichia coli FVEC1412]
 gi|293413956|ref|ZP_06656605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B185]
 gi|293418774|ref|ZP_06661209.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B088]
 gi|298379697|ref|ZP_06989302.1| Dimethylallyl adenosine tRNA methylthiotransferase miaB
           [Escherichia coli FVEC1302]
 gi|300817816|ref|ZP_07098030.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           107-1]
 gi|300823020|ref|ZP_07103154.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           119-7]
 gi|300901175|ref|ZP_07119279.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           198-1]
 gi|300907841|ref|ZP_07125457.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 84-1]
 gi|300931599|ref|ZP_07146911.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           187-1]
 gi|300937869|ref|ZP_07152662.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 21-1]
 gi|300951164|ref|ZP_07165027.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           116-1]
 gi|300959238|ref|ZP_07171313.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           175-1]
 gi|300989977|ref|ZP_07179053.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 45-1]
 gi|300996640|ref|ZP_07181498.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           200-1]
 gi|301025204|ref|ZP_07188775.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 69-1]
 gi|301028854|ref|ZP_07192030.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           196-1]
 gi|301049854|ref|ZP_07196792.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           185-1]
 gi|301302146|ref|ZP_07208279.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           124-1]
 gi|301643922|ref|ZP_07243949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           146-1]
 gi|307137277|ref|ZP_07496633.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli H736]
 gi|307312622|ref|ZP_07592254.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli W]
 gi|309786323|ref|ZP_07680949.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1617]
 gi|312970738|ref|ZP_07784919.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1827-70]
 gi|331641164|ref|ZP_08342299.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H736]
 gi|331651675|ref|ZP_08352694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M718]
 gi|331662028|ref|ZP_08362951.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA143]
 gi|331667016|ref|ZP_08367890.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA271]
 gi|331672195|ref|ZP_08372987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA280]
 gi|331676323|ref|ZP_08377035.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H591]
 gi|331682080|ref|ZP_08382704.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H299]
 gi|83288201|sp|P0AEI3|MIAB_ECO57 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83288202|sp|P0AEI2|MIAB_ECOL6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83288203|sp|P0AEI1|MIAB_ECOLI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123049384|sp|Q0TK19|MIAB_ECOL5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123742173|sp|Q32IR1|MIAB_SHIDS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890518|sp|A7ZJ54|MIAB_ECO24 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890520|sp|B7L9K8|MIAB_ECO55 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890521|sp|B5YQL3|MIAB_ECO5E RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890522|sp|B7NM12|MIAB_ECO7I RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890524|sp|B7M5I8|MIAB_ECO8A RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890525|sp|B1X656|MIAB_ECODH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890526|sp|A7ZXT0|MIAB_ECOHS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890528|sp|B1IYE7|MIAB_ECOLC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890529|sp|B7N9R6|MIAB_ECOLU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890531|sp|B1LLB3|MIAB_ECOSM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890532|sp|B7LKU3|MIAB_ESCF3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|26107036|gb|AAN79220.1|AE016757_124 Hypothetical protein yleA [Escherichia coli CFT073]
 gi|1778580|gb|AAB40863.1| HI0019 homolog [Escherichia coli]
 gi|1786882|gb|AAC73762.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|13360157|dbj|BAB34122.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|81240086|gb|ABB60796.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|85674736|dbj|BAE76357.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K12 substr. W3110]
 gi|110342475|gb|ABG68712.1| MiaB protein [Escherichia coli 536]
 gi|157065829|gb|ABV05084.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli HS]
 gi|157079703|gb|ABV19411.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E24377A]
 gi|169755910|gb|ACA78609.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli ATCC
           8739]
 gi|169888176|gb|ACB01883.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170517630|gb|ACB15808.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli SMS-3-5]
 gi|187767200|gb|EDU31044.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4196]
 gi|188013873|gb|EDU51995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4113]
 gi|188487718|gb|EDU62821.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 53638]
 gi|189002755|gb|EDU71741.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4076]
 gi|189354844|gb|EDU73263.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4401]
 gi|189363501|gb|EDU81920.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4486]
 gi|189365364|gb|EDU83780.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4501]
 gi|189373737|gb|EDU92153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC869]
 gi|189375569|gb|EDU93985.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC508]
 gi|190905753|gb|EDV65374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli F11]
 gi|192930949|gb|EDV83553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E22]
 gi|192957642|gb|EDV88087.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E110019]
 gi|194412234|gb|EDX28540.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B171]
 gi|194417317|gb|EDX33425.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1012]
 gi|194421176|gb|EDX37200.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 101-1]
 gi|208728692|gb|EDZ78293.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4206]
 gi|208731526|gb|EDZ80214.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4045]
 gi|208737482|gb|EDZ85166.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4042]
 gi|209157152|gb|ACI34585.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. EC4115]
 gi|209776858|gb|ACI86741.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776860|gb|ACI86742.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776862|gb|ACI86743.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776864|gb|ACI86744.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|209776866|gb|ACI86745.1| hypothetical protein ECs0699 [Escherichia coli]
 gi|217320698|gb|EEC29122.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli O157:H7
           str. TW14588]
 gi|218350832|emb|CAU96528.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           55989]
 gi|218357303|emb|CAQ89938.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia
           fergusonii ATCC 35469]
 gi|218359971|emb|CAQ97515.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           IAI1]
 gi|218369011|emb|CAR16765.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           IAI39]
 gi|218431091|emb|CAR11967.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           UMN026]
 gi|227838450|gb|EEJ48916.1| 2-methylthioadenine synthase [Escherichia coli 83972]
 gi|238861566|gb|ACR63564.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           BW2952]
 gi|242376435|emb|CAQ31137.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB [Escherichia
           coli BL21(DE3)]
 gi|253325399|gb|ACT30001.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972641|gb|ACT38312.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli B
           str. REL606]
 gi|253976835|gb|ACT42505.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           BL21(DE3)]
 gi|254591224|gb|ACT70585.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O157:H7 str. TW14359]
 gi|257752561|dbj|BAI24063.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O26:H11 str. 11368]
 gi|257758034|dbj|BAI29531.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O103:H2 str. 12009]
 gi|257763165|dbj|BAI34660.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O111:H- str. 11128]
 gi|260450172|gb|ACX40594.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli DH1]
 gi|284920461|emb|CBG33522.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           042]
 gi|290761483|gb|ADD55444.1| UPF0004 protein yleA [Escherichia coli O55:H7 str. CB9615]
 gi|291325302|gb|EFE64717.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B088]
 gi|291428508|gb|EFF01533.1| RNA modification enzyme [Escherichia coli FVEC1412]
 gi|291434014|gb|EFF06987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli B185]
 gi|298279395|gb|EFI20903.1| Dimethylallyl adenosine tRNA methylthiotransferase miaB
           [Escherichia coli FVEC1302]
 gi|299878159|gb|EFI86370.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           196-1]
 gi|300298388|gb|EFJ54773.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           185-1]
 gi|300304469|gb|EFJ58989.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           200-1]
 gi|300314167|gb|EFJ63951.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           175-1]
 gi|300355389|gb|EFJ71259.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           198-1]
 gi|300396156|gb|EFJ79694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 69-1]
 gi|300400473|gb|EFJ84011.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 84-1]
 gi|300407252|gb|EFJ90790.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 45-1]
 gi|300449567|gb|EFK13187.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           116-1]
 gi|300457112|gb|EFK20605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 21-1]
 gi|300460623|gb|EFK24116.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           187-1]
 gi|300524369|gb|EFK45438.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           119-7]
 gi|300529513|gb|EFK50575.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           107-1]
 gi|300842698|gb|EFK70458.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           124-1]
 gi|301077692|gb|EFK92498.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           146-1]
 gi|306907324|gb|EFN37829.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli W]
 gi|307552525|gb|ADN45300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli ABU
           83972]
 gi|308925717|gb|EFP71198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella dysenteriae
           1617]
 gi|309700899|emb|CBJ00196.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           ETEC H10407]
 gi|310337387|gb|EFQ02525.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1827-70]
 gi|315059915|gb|ADT74242.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli W]
 gi|315135327|dbj|BAJ42486.1| hypothetical protein ECDH1ME8569_0630 [Escherichia coli DH1]
 gi|315255031|gb|EFU34999.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 85-1]
 gi|315292085|gb|EFU51437.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           153-1]
 gi|315616417|gb|EFU97034.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 3431]
 gi|320193067|gb|EFW67707.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320643515|gb|EFX12685.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H- str. 493-89]
 gi|320648850|gb|EFX17477.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H- str. H 2687]
 gi|320660116|gb|EFX27646.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320664914|gb|EFX32049.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323153611|gb|EFZ39859.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli EPECa14]
 gi|323158884|gb|EFZ44895.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli E128010]
 gi|323179860|gb|EFZ65417.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1180]
 gi|323184984|gb|EFZ70351.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 1357]
 gi|323379521|gb|ADX51789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli KO11]
 gi|323938422|gb|EGB34676.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E1520]
 gi|323943075|gb|EGB39234.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E482]
 gi|323945136|gb|EGB41198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H120]
 gi|323963229|gb|EGB58797.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H489]
 gi|323967607|gb|EGB63023.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M863]
 gi|323972115|gb|EGB67329.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA007]
 gi|324006281|gb|EGB75500.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 57-2]
 gi|324010389|gb|EGB79608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 60-1]
 gi|324114782|gb|EGC08750.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia fergusonii
           B253]
 gi|324116735|gb|EGC10650.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli E1167]
 gi|325498160|gb|EGC96019.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           fergusonii ECD227]
 gi|326341412|gb|EGD65204.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli O157:H7 str.
           1044]
 gi|326345808|gb|EGD69547.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli O157:H7 str.
           1125]
 gi|327254346|gb|EGE65968.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli STEC_7v]
 gi|331037962|gb|EGI10182.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H736]
 gi|331049953|gb|EGI22011.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli M718]
 gi|331060450|gb|EGI32414.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA143]
 gi|331066240|gb|EGI38124.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA271]
 gi|331070662|gb|EGI42025.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA280]
 gi|331076381|gb|EGI47663.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H591]
 gi|331080759|gb|EGI51933.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H299]
 gi|332094333|gb|EGI99384.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 5216-82]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|153853148|ref|ZP_01994557.1| hypothetical protein DORLON_00542 [Dorea longicatena DSM 13814]
 gi|149753934|gb|EDM63865.1| hypothetical protein DORLON_00542 [Dorea longicatena DSM 13814]
          Length = 217

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 5/139 (3%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLRFLGRNHNAS 155
            V   VEI I   P  +  +      +          I LG+Q++   +L+ + R H  +
Sbjct: 6   KVPDIVEIAISTRPDCIREDYLDVLNRIRETTGIQIAIELGLQTVNYHTLKRISRGHTLA 65

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           E I A+         +   +I  LP   M       +   +  V  +  + L I K T  
Sbjct: 66  EYIDAVLRISRYGYDICTHVILNLPGDEMDDSIETAKILSALPVQIVKAHSLYIAKDTRL 125

Query: 216 YKMHKDGDLVLPSENVAVD 234
              +++G + L  +   ++
Sbjct: 126 CDDYENGTISLCEKEEYLN 144


>gi|327439172|dbj|BAK15537.1| predicted Fe-S oxidoreductase [Solibacillus silvestris StLB046]
          Length = 318

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 76/218 (34%), Gaps = 15/218 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     +++   +      ++  +F   
Sbjct: 41  CPNRDGTVAFGGCTFCS-AAGSGDFAGSKVDTIPVQFEKIKAKMENKWKDGLTMAYFQAY 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    +       V     ++I   P  +  +  +   +        + LG
Sbjct: 100 TNTHAPLEVLKEKFEAALACEGVMG---LSIATRPDCLPDDVVEYLAELNERTYLWVELG 156

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ E++   + R H+ +  +  ++  R    R+   +I  LP +         +    
Sbjct: 157 LQTVHEKTANLINRAHDYATYVEGVNKLRKHGIRVVTHIINGLPLEDYDMMMETAREVAK 216

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
             V  + ++ L + KGT   K ++ G L    ++  + 
Sbjct: 217 LDVQGIKIHLLHLLKGTPLVKQYEKGMLEFMEKDAYIQ 254


>gi|86131573|ref|ZP_01050171.1| tRNA-i(6)A37 modification enzyme MiaB [Dokdonia donghaensis MED134]
 gi|85818018|gb|EAQ39186.1| tRNA-i(6)A37 modification enzyme MiaB [Dokdonia donghaensis MED134]
          Length = 484

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 98/265 (36%), Gaps = 25/265 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    QS L E+Q +         L G    S +++GGG 
Sbjct: 179 CDNMCTFC---VVPFTRGRERSRDPQSILEEVQDLANRGFKEITLLGQNVDSYLWYGGGL 235

Query: 81  ------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  S +      N A ++D +AK          T  +NP  + ++  +        
Sbjct: 236 KKDFDKASEMAKATAVNFAQLMDMVAKAQPKMRIRFST--SNPQDMTLDVIEVMASHKNI 293

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
            N I L VQS  ++ L+ + R H  +E    I   +N+ P +    D+I   P +T    
Sbjct: 294 CNYIHLPVQSGSDRILKLMNRQHTVAEYKTLIDNIKNLIPDIGISQDMITGFPTETEEDH 353

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L        D+  ++  +   GTL  +  +D   +   +    D+ +L + I+  + 
Sbjct: 354 QGTLDLIDYVKYDYGFMFYYSERPGTLAERKMEDDIPLEIKKRRLQDVIDLQREISRKNL 413

Query: 248 LHAYEISNHSFLGAESLHNLNYWRY 272
           L   + +    +  ES  N + W  
Sbjct: 414 LRYQDQTIEVLIEKESKKNKDEWSG 438


>gi|187733108|ref|YP_001879330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           boydii CDC 3083-94]
 gi|229890659|sp|B2TU59|MIAB_SHIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187430100|gb|ACD09374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii CDC
           3083-94]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T S     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GSTGSF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|240948129|ref|ZP_04752539.1| hypothetical protein AM305_05003 [Actinobacillus minor NM305]
 gi|240297609|gb|EER48101.1| hypothetical protein AM305_05003 [Actinobacillus minor NM305]
          Length = 475

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F              +   L E+  +    G R ++ +      + G T  
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGETF- 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     +     +P     +  + Y+     V+ + L +QS
Sbjct: 211 ---DGQICSFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYKDTPELVSFLHLPIQS 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + RNH A E  A I   R   P   +S D I   P +T   +E  ++     
Sbjct: 268 GSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAEDFEQTMKIIEQV 327

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D    +  +   GT    +       +  +     LY L Q I +   
Sbjct: 328 NFDMSFSFIYSARPGTPAADLPD----DVTEDEKKERLYRLQQRINNQAM 373


>gi|291563253|emb|CBL42069.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
           bacterium SS3/4]
          Length = 476

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     ++ +  L     +  +  G    S    +
Sbjct: 194 CNNFCSYC-----IVPYVRGRERS-REPEDIIKEIEGLVADGVVEVMLLGQNVNSYGKNL 247

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  + K   +       + ++P  +     +  + +    + + L +QS  
Sbjct: 248 EQPITFAELLRRVEKIEGLERIRF--MTSHPKDLSDELIETMKNSKKICSHLHLPLQSGS 305

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++  + +A +   R   P +S   D+I   P +T   +E  +        
Sbjct: 306 SEILKRMNRKYSKEQYLALVEKLRAAMPDISLTTDIIVGFPGETEEDFEETMDVVRKVRY 365

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           D    +  +   GT    M   
Sbjct: 366 DSAFTFIYSKRTGTPAAAMPNQ 387


>gi|229825489|ref|ZP_04451558.1| hypothetical protein GCWU000182_00849 [Abiotrophia defectiva ATCC
           49176]
 gi|229790052|gb|EEP26166.1| hypothetical protein GCWU000182_00849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 15/196 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C   C YC     +RR     E +    LTE + +  +     +  + F   GG  S   
Sbjct: 66  CKNDCYYCG----IRRSNTNAERYR---LTEEEILSCVDKGYELGFMTFVLQGGEDSAFS 118

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +  I+  I   +      E+ +  +       ++   ++AG +R  L  ++ +    
Sbjct: 119 DETLTEIIKYIKGKYP-----EVAVTISLGERSRESYLKLKEAGADRYLLRHETADSNHY 173

Query: 146 RFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             L     +    +  +   + I   +    +   P QT      +L+       +   +
Sbjct: 174 AKLHPPELSLENRMRCLKELKEIGFYVGCGFMVGSPYQTSETIAKDLKFIEELKPEMCGI 233

Query: 205 YQLTIEKGTLFYKMHK 220
                +K T F  M  
Sbjct: 234 GPFISQKDTPFKNMPN 249


>gi|74311197|ref|YP_309616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           sonnei Ss046]
 gi|82543105|ref|YP_407052.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           boydii Sb227]
 gi|123742024|sp|Q324N4|MIAB_SHIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123746029|sp|Q3Z4D1|MIAB_SHISS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|73854674|gb|AAZ87381.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81244516|gb|ABB65224.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|320174711|gb|EFW49843.1| tRNA-i(6)A37 methylthiotransferase [Shigella dysenteriae CDC
           74-1112]
 gi|323163924|gb|EFZ49733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella sonnei 53G]
 gi|332097757|gb|EGJ02731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 3594-74]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T S     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GSTGSF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|261368034|ref|ZP_05980917.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM
           15176]
 gi|282570022|gb|EFB75557.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM
           15176]
          Length = 446

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C  +C YC            +   I+  + E +W+        +  +      P+     
Sbjct: 155 CNNRCHYCA---IPLIRGPLRSRPIEDCVAEARWLA----GEGVRELILVAQDPTAYGED 207

Query: 86  ---PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P  +  +LD + +   +       + A P  +         +    V  + L +Q  
Sbjct: 208 WGKPGAVCELLDRLQQIDGIRWIR--ILYAYPERISDAFIAAMVRNTKVVPYLDLPIQHC 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R    ++   AI   R   P ++    LI   P +T  Q+        +  
Sbjct: 266 DDAVLKAMNRRGGRADIEDAIARLRAAIPGITLRTTLIAGFPGETEEQYAELCDFVKTMR 325

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D L  +  + E+ T+  KM
Sbjct: 326 FDRLGCFAYSAEENTVAAKM 345


>gi|182420048|ref|ZP_02951282.1| radical SAM protein, family [Clostridium butyricum 5521]
 gi|237669566|ref|ZP_04529546.1| radical SAM protein, family [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376085|gb|EDT73672.1| radical SAM protein, family [Clostridium butyricum 5521]
 gi|237655010|gb|EEP52570.1| radical SAM protein, family [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 310

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 76/237 (32%), Gaps = 21/237 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFF 76
           C  +        C +C      R       + I S   +   ++++   +  S     +F
Sbjct: 36  CPNRDGKAGRGGCTFCS----ARGSGDFAGDRIMSISNQFDDVKEMMAHKWKSGKYIAYF 91

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +    + +        +       V + I   P  +  +      +        +
Sbjct: 92  QAYTNTYAPVEELKR---KYEEAINKDGVVGLAIATRPDCLGEDVLDLLEEINKKIYVWV 148

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q+  + + R + R +       A+   ++         I+ LP +T       ++ 
Sbjct: 149 ELGLQTSNDDTARKINRGYTLEVFDEAMKNLKSRNIDTVVHAIFGLPGETKEDMFNTVEH 208

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                   + ++ L + K T   + ++ G+L   S+   +D+   + S+     +  
Sbjct: 209 IAHSGAMGIKIHLLHLMKNTKLVENYEKGELKFLSQEDYIDIITRSVSMLPKEMVVH 265


>gi|218129306|ref|ZP_03458110.1| hypothetical protein BACEGG_00883 [Bacteroides eggerthii DSM 20697]
 gi|317475275|ref|ZP_07934541.1| TIGR01212 family radical SAM protein [Bacteroides eggerthii
           1_2_48FAA]
 gi|217988483|gb|EEC54804.1| hypothetical protein BACEGG_00883 [Bacteroides eggerthii DSM 20697]
 gi|316908529|gb|EFV30217.1| TIGR01212 family radical SAM protein [Bacteroides eggerthii
           1_2_48FAA]
          Length = 308

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 7/206 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKPICLQLEEGKRFFAHKYPEMKYLAYFQAYTNTY---GELES 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +  +  +      K     +  G++S  +++LR +
Sbjct: 101 LKRKYEEALSVEGVVGLVIGTRPDCMPDDLLRYLESINKHTFLLVEYGIESTCDETLRRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H       A+             +I  LP +T      +        +  L ++QL 
Sbjct: 161 NRGHTFQTTADAVCRTAACGILTGGHVILGLPGETRQSIVAQAHDLSQLPLTTLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVD 234
           + +GT     ++         +V   
Sbjct: 221 LIRGTRMALEYEQNPEDFHLFDVEEY 246


>gi|219851304|ref|YP_002465736.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
 gi|219545563|gb|ACL16013.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
          Length = 489

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 56/134 (41%)

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
             +D   +  +   ++     +  ++V  +     +KAG++ I  GV+S   ++L+ + +
Sbjct: 263 RAIDIAHEIRSRGLDISFVASSRVNAVNRDLLMELKKAGLSTIYYGVESGSLRTLKLMNK 322

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
               S A  A+ +A++    +    I   P +T       ++ A+    D+     LT  
Sbjct: 323 RITLSMAEDAVRIAKDCGISVLTSFIIGYPGETYEDMNATIRFAIRLDPDYAQFTILTPY 382

Query: 211 KGTLFYKMHKDGDL 224
            GT  ++  K  +L
Sbjct: 383 PGTPIFQELKKNNL 396


>gi|83815966|ref|YP_446673.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salinibacter ruber DSM
           13855]
 gi|83757360|gb|ABC45473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salinibacter ruber DSM
           13855]
          Length = 572

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 31/260 (11%)

Query: 15  GSNSLGVYVHWP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----- 67
            SN +  YV      C   C +C            +   + + L+E+  + +        
Sbjct: 253 DSNGVSAYVSI-MRGCDNMCTFC---VVPFTRGREESRPVTTILSEVARLAEEGYKEVTL 308

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
             ++++S  +     + +    +      + +   VS  + +     +P     +  + +
Sbjct: 309 LGQNVNSYHYTDADGTSVSFAEL------VDRVSRVSPEMRVRYSTSHPKDCTDDLLKVH 362

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
           R      N I L VQ    + L  + R +   E +A    A+ + P +S   DLI     
Sbjct: 363 RDRPNVCNYIHLPVQHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCG 422

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T  Q E  L        DH  +++ +    T   + ++D                  + 
Sbjct: 423 ETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAARKYEDDVP-------EDTKQRRLEE 475

Query: 242 ITSAHGLHAYEISNHSFLGA 261
           I      HA E SN + +G 
Sbjct: 476 IIELQNQHAKE-SNEAEVGR 494


>gi|332281803|ref|ZP_08394216.1| MiaB protein [Shigella sp. D9]
 gi|332104155|gb|EGJ07501.1| MiaB protein [Shigella sp. D9]
          Length = 486

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 169 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 224

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 225 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 279

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 280 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 339

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 340 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 386


>gi|328545928|ref|YP_004306037.1| 2-methylthioadenine synthetase (MiaB-like) protein [polymorphum
           gilvum SL003B-26A1]
 gi|326415668|gb|ADZ72731.1| 2-methylthioadenine synthetase (MiaB-like) protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 485

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E + +    G R I+ +      + G  P 
Sbjct: 184 CDKFCTFC---VVPYTRGAEVSRPLGQILQEAEGLAA-AGVREITLLGQNVNAWHGEGPD 239

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P  +  +L  +A+   +      T  ++P  ++      +R     +  + L VQS 
Sbjct: 240 G-RPWGLGRLLRRLAEVDGLDRLRYTT--SHPRDMDDELIAAHRDMPELMPYLHLPVQSG 296

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H   +    +   R       +S D I   P +T   +   +       
Sbjct: 297 SDRILAAMNRKHGRDDYFRLVDRIREASPGLALSGDFIVGFPGETDADFADTMDLVRRVG 356

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
                 ++ +   GT    M
Sbjct: 357 YASCFSFKYSQRPGTPGAAM 376


>gi|237744101|ref|ZP_04574582.1| oxygen-independent coproporphyrinogen III [Fusobacterium sp. 7_1]
 gi|229431330|gb|EEO41542.1| oxygen-independent coproporphyrinogen III [Fusobacterium sp. 7_1]
          Length = 297

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 78/215 (36%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCTFCS----MYKDKKFIIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L+F
Sbjct: 85  LIQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLRKLYEKGLTLVYLGVESGDDEALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQEGKYDYMEGIEVLKEMKLI 239


>gi|15800374|ref|NP_286386.1| hypothetical protein Z0810 [Escherichia coli O157:H7 EDL933]
 gi|25305438|pir||F85566 hypothetical protein yleA [imported] - Escherichia coli  (strain
           O157:H7, substrain EDL933)
 gi|12513570|gb|AAG54994.1|AE005245_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|294012737|ref|YP_003546197.1| MiaB-like enzyme [Sphingobium japonicum UT26S]
 gi|292676067|dbj|BAI97585.1| MiaB-like enzyme [Sphingobium japonicum UT26S]
          Length = 442

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 76/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSIFFG-------- 77
           C  +C +C     +  Y  G    + +    +   R+L   G R I              
Sbjct: 167 CDHRCTFC-----IIPYGRGNSRSVPA-GAVIDKARELVDAGYREIVLTGVDVTSYGPDL 220

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
            G PSL     I  +L G+     +  +   ++E +    +      +    +  + L +
Sbjct: 221 PGAPSL--GLLIERLLKGVPDLPRLRLSSLDSVEIDERLFD---LIAHEPRMMPHLHLSL 275

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H  ++A+  +   +   P +S   D+I   P +    +E  L+   
Sbjct: 276 QAGDDMILKRMKRRHGRADAVRIVERLKAARPGISIGADIIAGFPTEDEAMFENSLRLVE 335

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
             A+ H  ++  +   GT   +M +
Sbjct: 336 ECAIVHGHIFPYSPRAGTPAARMPQ 360


>gi|90420542|ref|ZP_01228449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335270|gb|EAS49023.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 483

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 25/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   LT++    +      +  +   G   +    Q
Sbjct: 179 CDKFCTFC-----VVPYTRGSE--VSRPLTQIMGEARTLAAAGVREVTLLGQNVNGWSGQ 231

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +       +  +L  +A+    +     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 232 DEAGRDIGLGGLLRALAEIPGFARLRYTT--SHPRDMDDDLIAAHRDLPALMPYLHLPVQ 289

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H  ++ +  +   R   P ++   D I   P +T   +E  ++    
Sbjct: 290 SGSDRILKAMNRRHTGADYLRLLDRIRQARPDIALSGDFIVGFPGETDADFEDTMELVSE 349

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                   ++ +   GT    M    D     E V  +     Q++   H +   E
Sbjct: 350 VRYASAFSFKYSARPGTPGATMDDHVD-----EAVKSERLQRLQTLLREHQVDFAE 400


>gi|24112041|ref|NP_706551.1| hypothetical protein SF0621 [Shigella flexneri 2a str. 301]
 gi|30062152|ref|NP_836323.1| hypothetical protein S0643 [Shigella flexneri 2a str. 2457T]
 gi|110804691|ref|YP_688211.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           flexneri 5 str. 8401]
 gi|209917923|ref|YP_002292007.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli SE11]
 gi|300920521|ref|ZP_07136947.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           115-1]
 gi|81723658|sp|Q83LY3|MIAB_SHIFL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|122957570|sp|Q0T6S0|MIAB_SHIF8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890530|sp|B6HYN0|MIAB_ECOSE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|24050864|gb|AAN42258.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040397|gb|AAP16129.1| hypothetical protein S0643 [Shigella flexneri 2a str. 2457T]
 gi|110614239|gb|ABF02906.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|209911182|dbj|BAG76256.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|281600005|gb|ADA72989.1| protein yleA [Shigella flexneri 2002017]
 gi|300412460|gb|EFJ95770.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           115-1]
 gi|313649693|gb|EFS14117.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri 2a str.
           2457T]
 gi|320198212|gb|EFW72816.1| tRNA-i(6)A37 methylthiotransferase [Escherichia coli EC4100B]
 gi|324016069|gb|EGB85288.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           117-3]
 gi|332760967|gb|EGJ91255.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri
           4343-70]
 gi|332761234|gb|EGJ91520.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri
           2747-71]
 gi|332768235|gb|EGJ98420.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri
           2930-71]
 gi|333007424|gb|EGK26904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri VA-6]
 gi|333007943|gb|EGK27419.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-218]
 gi|333010077|gb|EGK29512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-272]
 gi|333020908|gb|EGK40168.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-227]
 gi|333021472|gb|EGK40722.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-304]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|296446184|ref|ZP_06888132.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b]
 gi|296256378|gb|EFH03457.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b]
          Length = 400

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 65/204 (31%), Gaps = 24/204 (11%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F     R     +         +   R+L        +  G    S   
Sbjct: 115 CDHRCSFCVIPFGRGPSRSAAPAD--------VIAEARRLVAVGRREIVLTGVDLTSYRH 166

Query: 86  PQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                      IL    +   +  +    IE      + +      +       + L +Q
Sbjct: 167 EDVTLGALAREILRATPQLERLRLSSIDCIET-----DADLLDLMGEEPRLAPHLHLSLQ 221

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S ++ +L+ + R H+ ++AI      R+  P +    D I   P +T   +   L     
Sbjct: 222 SGDDLTLKRMKRRHSRADAIHFCAEMRDARPDIVLGADFIAGFPTETEDMFARTLDLVEE 281

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             + HL ++  +   GT   +M +
Sbjct: 282 CGLTHLHVFPFSPRPGTPAARMPQ 305


>gi|262370519|ref|ZP_06063844.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter johnsonii
           SH046]
 gi|262314319|gb|EEY95361.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter johnsonii
           SH046]
          Length = 485

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 67/195 (34%), Gaps = 18/195 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTP--SL 83
           C  YC F              +   L E+  + +  G R IS +      + G T   ++
Sbjct: 194 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIATLAE-KGVREISLLGQNVNGYRGETFEGNI 252

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               ++  ++  I     +         ++P     +  + YR     V+ + L VQS  
Sbjct: 253 CTFADLLRLVAEIPGIGRLRYTT-----SHPLEFNDDLIECYRDLPQMVSHLHLPVQSGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + RNH     I  I   R + P   +S D I   P +T   +E   Q       
Sbjct: 308 NDVLQAMKRNHTIDVYIDKIAKLRKVRPDMHLSSDFIIGFPGETDAHFEETYQFIKDMDF 367

Query: 200 DHLSLYQLTIEKGTL 214
           DH   +  +   GT 
Sbjct: 368 DHSYSFVYSKRPGTP 382


>gi|239787273|emb|CAX83751.1| Radical SAM domain protein [uncultured bacterium]
          Length = 478

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 12/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +CD  +   R++  +        + ++ +R       I        T +     
Sbjct: 209 CPYRCTFCDQKTPPYRWRSPE--------SFIEEVRLNREKFDIQEFDIYDSTFT----A 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   ++            V  T  +   +V        + AG + I  GV+S   + L+ 
Sbjct: 257 NRKRVMKICELLVAEGLKVNWTARSTLMAVNHEMLDAMKAAGCHTIMYGVESSNAEILKT 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + ++      +  I    +I  ++    ++  P +T    E  ++ +L   +D+     +
Sbjct: 317 MKKSIPRERVVDRIQYTHDIGIQVLGFFMFGYPGETRETIEDTIRYSLELPLDYAQYTVI 376

Query: 208 TIEKGTLFYKMHKDG 222
                T  + +++  
Sbjct: 377 WPFPDTEIHDLYQQQ 391


>gi|326201371|ref|ZP_08191243.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
           2782]
 gi|325988939|gb|EGD49763.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
           2782]
          Length = 436

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 79/234 (33%), Gaps = 14/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +     ++ +RQL     +  +  G    S     
Sbjct: 153 CSQFCAYC----IIPYARGPIRS--RKPDDIIEEVRQLADSGFLEVVLTGIHLASYGREL 206

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I K  ++     I +    P+++     +             L +QS  +++
Sbjct: 207 EDTSLLDIIRKIHSIDGIKRIRLGSIEPTTITKEFVEAAVGLPKLCPHFHLSLQSGCDKT 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +N  E   ++ L +N  P ++   DL+   P +T   +      A       +
Sbjct: 267 LVEMNRKYNTDEYRRSVELLKNNIPDVAITTDLMVGFPGETGEDFAESRDFAEEIGFSKI 326

Query: 203 SLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +++ +  KGT            +    SE +      L +     +     E+
Sbjct: 327 HVFKYSPRKGTPAAGMKNQVSPEEKERRSEIMLALSDELEKKYLEKYVGRDMEV 380


>gi|88811726|ref|ZP_01126980.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrococcus mobilis Nb-231]
 gi|88791117|gb|EAR22230.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrococcus mobilis Nb-231]
          Length = 443

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 69/227 (30%), Gaps = 13/227 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +     F        Q   Q     ++      G   + ++  
Sbjct: 144 CSKYCTFC--VVPYTRGEEVSRPFEDVLAEVAQLAEQGVREVTLLGQNVNGYLGT-MDDG 200

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +A +   I     V     I     +P +      + Y +    V+ + L VQS  ++ 
Sbjct: 201 TVADLALLIHFIAAVDGIDRIRFTTSHPLNFNATLIEAYAEVPQLVSHLHLPVQSGSDKV 260

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + RNH     +  I   +   P   +S D I   P +    +E  L        D  
Sbjct: 261 LRLMKRNHTRDYYLDIIERLKAARPDLVVSSDFIVGFPGELERDFEDTLALVEQVGFDQS 320

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             +  +   GT   ++     L               Q I + +  H
Sbjct: 321 FSFIYSRRPGTPAAQLPDAIPL-----EAKKQRLYRLQEILNRNAQH 362


>gi|237809456|ref|YP_002893896.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Tolumonas
           auensis DSM 9187]
 gi|237501717|gb|ACQ94310.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Tolumonas auensis DSM
           9187]
          Length = 476

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 28/262 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++N    +       YV     C K C YC                    L E+  +
Sbjct: 133 IEKFDNLPEPRAEGPTA-YVSIMEGCSKYCTYC---VVPYTRGEEVSRPQDDVLYEIAQL 188

Query: 63  RQLTGPRSISSI----------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
            +  G R ++ +           + GG   +     +  ++  I     +         +
Sbjct: 189 AEQ-GVREVNLLGQNVNAYRGETYDGG---ICSFAQLLRLVAAIDGIDRIRYTT-----S 239

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P     +  + Y+     VN + L VQS  ++ L  + R H A E  + I   + + P 
Sbjct: 240 HPIEFTDDIIEVYKDTPELVNFLHLPVQSGSDKILSMMKRPHTALEYKSKIRKLKAVRPD 299

Query: 171 M--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +  S D I   P +T   +   ++       D    +  +   GT    M  D  + +  
Sbjct: 300 ILISSDFIVGFPGETDEDFAKTMKLIEDIQFDTSYSFVFSARPGTPAADMPDDTPMEVKK 359

Query: 229 ENVAVDLYNLTQSITSAHGLHA 250
           E +A     +            
Sbjct: 360 ERLAHLQQTINNQAMQYSRQMH 381


>gi|126727641|ref|ZP_01743473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2150]
 gi|126703057|gb|EBA02158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2150]
          Length = 424

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 15/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C                +   L E + + +    R ++ I   G   +     
Sbjct: 144 CDKFCTFC---VVPYTRGAEVSRPVDRILREARELVE----RGVAEINLLGQNVNAYHGE 196

Query: 86  -PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            P     +   I +  T+     I     +P  +E +    +      +  + L VQS  
Sbjct: 197 GPDGDWTLAQLIREMATIEGLERIRFTTSHPRDMEQDLIDAHGDCAKLMPYLHLPVQSGS 256

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H   E  A I   R++ P   +S D I   P +T   +   +        
Sbjct: 257 DKILKAMNRGHTREEYFALIKRIRDVRPDLLLSGDFIVGFPGETEEDFMDTMDLVEQVGF 316

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                ++ +   GT   + 
Sbjct: 317 GQAYSFKYSTRPGTPAAER 335


>gi|220929756|ref|YP_002506665.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|220000084|gb|ACL76685.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 426

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C  NS+V +    +    +S + E++        +   +  F      L +P+
Sbjct: 183 CNFTCRFC--NSNVSKRGYWRARSPESVIEEVRM----HYDKGWRAFRFNDDNF-LADPK 235

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I   I        N++  I A   S+ ++  +    +G   IS+G++SL    L  
Sbjct: 236 RAMKICQLIKPL-----NIKWRIFARAESLSLDICRTLLDSGCTHISVGIESLSASMLSK 290

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +G+  +       ++ A     R     I   P ++       ++      +   ++Y  
Sbjct: 291 MGKATSIERIKWGLNNAFEAGIRTRGFFIVGFPGESNETISETIKSLEDLKLGEATVYPC 350

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               GT  Y       +     + + +   + +   + +
Sbjct: 351 LPYPGTDLYSRPDHYGITWIDRDFS-NYIQVGKEKLTGY 388


>gi|301168365|emb|CBW27955.1| radical SAM-superfamily protein [Bacteriovorax marinus SJ]
          Length = 458

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF----GGGTPSL 83
           C + C +C            +   ++S +TE Q + + +G R ++ I       G    L
Sbjct: 166 CNRNCTFC---IIPTLRGRLRSRSVESLVTEAQKLSE-SGVRELNLISQDLSDYGVD--L 219

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E  N+  +L+G+     +           P  +     +  R +    + + + VQ   
Sbjct: 220 DENNNLHELLNGLETVEGIDWVRLFYF--YPDELTDEVIEQMRNSKKICSYLDMPVQHFS 277

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R    +E +  +   R   P +     +I   P ++   ++  L+       
Sbjct: 278 NNVLKRMNRRITGAEIMNRVERLRERIPGIVLRTSIIVGFPGESDEDFQELLEGVKKARF 337

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           +HL +++ + E+GT  Y++    D
Sbjct: 338 NHLGIFRYSDEEGTPAYRLKGKVD 361


>gi|332763335|gb|EGJ93575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella flexneri K-671]
          Length = 461

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 144 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 199

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 200 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 254

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 255 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 314

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 315 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 361


>gi|121551156|gb|ABM55768.1| MiaB [Pasteuria ramosa]
          Length = 361

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC            +    +  + E++ + +           ++   G      
Sbjct: 76  CDKFCTYC---IVPYTRGKERSRQPEDIIEEIKQLAEQGYQEVTLLGQNVNAYGKDFDKF 132

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                  + + +     ++ +      ++P   +        K G  V    L VQS ++
Sbjct: 133 P----YRLSNLLDDLSKINISRVRFTTSHPKDCDDELINVLAKRGNLVEHFHLPVQSGDD 188

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR H   + +  +   R   P +    D+I   P +T  Q+   ++       D
Sbjct: 189 TILKRMGRGHTREQYLMFVQRLREAIPDIVLTTDIIVGFPGETEEQFLNTIELLKEVQFD 248

Query: 201 HLSLYQLTIEKGTLFYKM 218
            +  +  +   GT    M
Sbjct: 249 AVFSFIYSPRSGTPAADM 266


>gi|91205468|ref|YP_537823.1| MiaB-like tRNA modifying enzyme [Rickettsia bellii RML369-C]
 gi|157827173|ref|YP_001496237.1| MiaB-like tRNA modifying enzyme [Rickettsia bellii OSU 85-389]
 gi|91069012|gb|ABE04734.1| MiaB-like tRNA modifying enzyme [Rickettsia bellii RML369-C]
 gi|157802477|gb|ABV79200.1| MiaB-like tRNA modifying enzyme [Rickettsia bellii OSU 85-389]
          Length = 415

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 25/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGG-- 78
           C   C +C     +  Y  G+   I +     + ++ L            +    +GG  
Sbjct: 142 CDHNCTFC-----IIPYGRGRNRSI-AIGAIAEQVKHLVLNGFKEVVFTGVDVTAYGGDL 195

Query: 79  -GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
            G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + +
Sbjct: 196 PGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LLAYNERIMPHFHISL 250

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R HN +E I   +  R I P +SF  D+I   P +T   +E   +   
Sbjct: 251 QAGDDMILKRMKRRHNRAEIIEFCNKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLIA 310

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              + +L ++  +  +GT   +M +    +   +  A  L    Q   +       
Sbjct: 311 EAELQYLHVFPYSEREGTPAARMPQVPKAIR--KERAEILRQEGQRQLAEFFKKHI 364


>gi|256028078|ref|ZP_05441912.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289766023|ref|ZP_06525401.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289717578|gb|EFD81590.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 297

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R +  IF   G   ++    
Sbjct: 29  HNRCTFCS----MYKDKKFVIKPIEDIKSDIDAFRALYKNRVVEKIFLADGDALVVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L+F
Sbjct: 85  LIQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLRKLYEKGLTLVYLGVESGDDEALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQNGKYDYMEGIEVLKEMKLI 239


>gi|90414094|ref|ZP_01222077.1| putative 2-methylthioadenine synthetase [Photobacterium profundum
           3TCK]
 gi|90324889|gb|EAS41417.1| putative 2-methylthioadenine synthetase [Photobacterium profundum
           3TCK]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 89/258 (34%), Gaps = 25/258 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                I   L E+  + +  G R ++ +      F G  P+
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPIDDVLYEIAQLAEQ-GVREVNLLGQNVNAFRG--PT 210

Query: 83  LI-EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    A +L  +A    +      T  ++P     +    Y      VN + L VQS
Sbjct: 211 HDGDMATFAELLRLVAAIDGIDRIRYTT--SHPIEFTDDIIDVYTDTPELVNYLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H   E  + I   R + P ++   D I A P ++   ++  ++     
Sbjct: 269 GSDRILTMMKRPHTVLEYKSKIRKLRKVRPDITMSSDFIVAFPGESDQDFQDTMKLIRDI 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN-- 255
             D    +  +   GT       D    +P E     LY L Q I +    HA ++ N  
Sbjct: 329 DFDISYSFVFSPRPGTPAA----DYPCDIPEEVKKERLYELQQQINTQAMRHARQMLNTE 384

Query: 256 -HSFLGAESLHNLNYWRY 272
               +   S  N+   R 
Sbjct: 385 QRILVEGPSRKNIMELRG 402


>gi|116254271|ref|YP_770109.1| methylase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258919|emb|CAK10028.1| putative methylase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 424

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 89/236 (37%), Gaps = 33/236 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------ISSIFFGG--- 78
           C  +C +C     +  Y  G    +       Q  + + G         + +  +GG   
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPMGAVVDQASKLVDGGYREIVLTGVDATSYGGDLP 201

Query: 79  GTPSL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           G P+L  +    +  + D       +SS   I  +A+   +  +  +         + L 
Sbjct: 202 GAPTLGLLAKTLLKQLPDIRR--LRLSSIDSIEADAHLMDLIADEPRFM-----PHLHLS 254

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H  ++A+  I  AR + P MSF  D+I   P +T   +E  ++ A
Sbjct: 255 LQHGDDMILKRMKRRHLRADALRFIEDARRLRPEMSFGADMIAGFPTETEEMFENAVRLA 314

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               + HL ++  +   GT   +M        P  + ++      +   + H LH 
Sbjct: 315 EEAGIAHLHVFPYSPRPGTPAARM--------PQLDRSLVKDRAARLRAAGHMLHQ 362


>gi|300927231|ref|ZP_07142963.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           182-1]
 gi|301329194|ref|ZP_07222185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 78-1]
 gi|300416797|gb|EFK00108.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           182-1]
 gi|300844482|gb|EFK72242.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 78-1]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     N+  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFANLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|300814184|ref|ZP_07094465.1| oxygen-independent coproporphyrinogen-III oxidase 2 domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511702|gb|EFK38921.1| oxygen-independent coproporphyrinogen-III oxidase 2 domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 160

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 54/152 (35%), Gaps = 20/152 (13%)

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            DLI  LP +        +++      D+++++ L+++KG+  Y      D    ++   
Sbjct: 1   MDLIVGLPGENRDSIINSIKKDNDLEPDNITIHTLSLKKGSRLY------DENFINDKDY 54

Query: 233 VDLYNLTQSITSAHGLHAY------------EISNHSFLGAESLHNLNYWRY-GDYIGIG 279
            D+   ++     +    Y            E   ++  G    +N+       D +G G
Sbjct: 55  WDVMEFSKKFMEENNYFPYYLYRQKRMALSGENIGYAKKGHICKYNVISMEEIEDILGFG 114

Query: 280 PGAHSRVKVGSHRVAIS-IEKHPESWLKMVRK 310
             + S++   +H    +   K    ++  +  
Sbjct: 115 ISSSSKIMDKNHNFKRTFNYKSLNDYINRIND 146


>gi|242278810|ref|YP_002990939.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242121704|gb|ACS79400.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 334

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 17/191 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C KKC YC     NS V RY++  ++ I S       +    G R+I  +   G   +  
Sbjct: 49  CNKKCNYCGLRAPNSKVSRYRMEVDSIIDS-----ARLAAEAGARTI--VLQSGDDFNY- 100

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +  I+ GI +++ V+      +  +        ++ +   G +R  L +++     
Sbjct: 101 SPGQVEEIILGIKESYDVA------VTLSLGDRSAGEYEHWFNCGADRCLLKLETTAPDI 154

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + +    N  + I  +   ++I   +   +I  LP  T+ Q   +L    +  +D ++ 
Sbjct: 155 YKKIRCGENYHQRIELLRSLQDIGYEVGSGIIVGLPDYTLEQLADDLLFLSALDLDMIAA 214

Query: 205 YQLTIEKGTLF 215
                   T F
Sbjct: 215 GPFIPHPDTPF 225


>gi|320178452|gb|EFW53420.1| tRNA-i(6)A37 methylthiotransferase [Shigella boydii ATCC 9905]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|153001812|ref|YP_001367493.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           baltica OS185]
 gi|160876545|ref|YP_001555861.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           baltica OS195]
 gi|304410288|ref|ZP_07391907.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS183]
 gi|307302001|ref|ZP_07581759.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica BA175]
 gi|229890649|sp|A6WRJ1|MIAB_SHEB8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890650|sp|A9KZZ3|MIAB_SHEB9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|151366430|gb|ABS09430.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS185]
 gi|160862067|gb|ABX50601.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS195]
 gi|304351697|gb|EFM16096.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS183]
 gi|306914039|gb|EFN44460.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica BA175]
 gi|315268739|gb|ADT95592.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS678]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GAICTFAELLRFVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R      ++S D I   P +T   +   ++       DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKAREGIQISSDFIIGFPGETKEDFADTMKLIEDIGFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  + D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDNVDMEEKKQRLAILQDRITQQAMRY 376


>gi|191168679|ref|ZP_03030459.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B7A]
 gi|309795469|ref|ZP_07689886.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           145-7]
 gi|190901271|gb|EDV61040.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli B7A]
 gi|308120844|gb|EFO58106.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           145-7]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|329957644|ref|ZP_08298119.1| radical SAM protein family [Bacteroides clarus YIT 12056]
 gi|328522521|gb|EGF49630.1| radical SAM protein family [Bacteroides clarus YIT 12056]
          Length = 308

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 7/194 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKPISLQLEEGKRFFARKYPEMRYLAYFQAYTNTY---GELES 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +  +V   V + I   P  +  +     +   K     +  G++S  +++LR +
Sbjct: 101 LKRKYEEALSVDGVVGLVIGTRPDCMPDDLLRYLENINKHTFLLVEYGIESTCDETLRRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H     + A+             +I  LP +T      + +      +  L ++QL 
Sbjct: 161 NRGHTFQTTVDAVQRTAACGILTGGHVILGLPGETHPTIVAQARELSHLPLTTLKMHQLQ 220

Query: 209 IEKGTLFYKMHKDG 222
           + +GT     ++  
Sbjct: 221 LIRGTRMALEYERH 234


>gi|217972293|ref|YP_002357044.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           baltica OS223]
 gi|217497428|gb|ACK45621.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS223]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GAICTFAELLRFVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R      ++S D I   P +T   +   ++       DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKAREGIQISSDFIIGFPGETKEDFADTMKLIEDIGFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  + D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDNVDMEEKKQRLAILQDRITQQAMRY 376


>gi|317472549|ref|ZP_07931868.1| TIGR01212 family radical SAM protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899958|gb|EFV21953.1| TIGR01212 family radical SAM protein [Anaerostipes sp. 3_2_56FAA]
          Length = 306

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 73/225 (32%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C   S         +  +   +     ++ +RQ T        +F   T +    + 
Sbjct: 46  CIFC---SEGGSGDFAPDAALPIGEQIEEGIRMIRQKTDASK-YIAYFQAFTNTYAPYEK 101

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +             V + +   P  +  +  +   +    +   + LG+Q++ E++ 
Sbjct: 102 LHSLF---YDAILRQEIVGLAVGTRPDCLPPDVLELLDELNQIKPVFVELGLQTIHEKTA 158

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +F+ R +  S    A+    ++   +   LI  LP +T       ++      V+ +   
Sbjct: 159 QFIRRGYPLSCFEQAVKALHDLGINVVVHLILGLPGETEEMMLESVRYLNQLPVNGVKFS 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + K T    +++     +   +  VD             +  
Sbjct: 219 LLHVLKHTDLGALYEKHPFPVYELDDYVDFVIRCIEELREDIVIH 263


>gi|283784432|ref|YP_003364297.1| isopentenyl-adenosine A37 tRNA methylthiolase [Citrobacter
           rodentium ICC168]
 gi|282947886|emb|CBG87448.1| isopentenyl-adenosine A37 tRNA methylthiolase [Citrobacter
           rodentium ICC168]
          Length = 474

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 74/229 (32%), Gaps = 20/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              D    +  +   GT    M  D       + + +    + Q   + 
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQDRINQQAMAW 376


>gi|257465566|ref|ZP_05629937.1| hypothetical protein AM202_03575 [Actinobacillus minor 202]
 gi|257451226|gb|EEV25269.1| hypothetical protein AM202_03575 [Actinobacillus minor 202]
          Length = 475

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F              +   L E+  +    G R ++ +      + G T  
Sbjct: 156 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGETF- 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     +     +P     +  + Y+     V+ + L +QS
Sbjct: 211 ---DGQICSFAELLRLVAAIDGIDRVRYTTSHPIEFTDDIIEVYKDTPELVSFLHLPIQS 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + RNH A E  A I   R   P   +S D I   P +T   +E  ++     
Sbjct: 268 GSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAEDFEQTMKVIEQV 327

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D    +  +   GT    +       +  +     LY L Q I +   
Sbjct: 328 NFDMSFSFIYSARPGTPAADLPD----DVTEDEKKERLYRLQQRINNQAM 373


>gi|239827771|ref|YP_002950395.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70]
 gi|239808064|gb|ACS25129.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70]
          Length = 451

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 82/255 (32%), Gaps = 14/255 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG  + ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKEVIRQAQQLVDAGYKEIVLTGIHTGGYGTDLKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           + A +L D   +   +      +IEA+   +     +  +++   V  + + +QS     
Sbjct: 210 SFAALLRDLDEQVVGLKRLRISSIEAS--QITDEIIEVLQRSDKIVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTVEFFAERLQRLREVFPELAITSDVIVGFPGETEEEFMETYHFIREQRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++  +   GT   +M    D          +      L +   S       E+      
Sbjct: 328 HVFPYSKRTGTPAARMPNQVDEEVKNERVHRLIALSDQLAKEYASQFEGQVLEVIPEER- 386

Query: 260 GAESLHNLNYWRYGD 274
             E+  +  Y  Y D
Sbjct: 387 DKENPESGLYIGYTD 401


>gi|213616133|ref|ZP_03371959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 316

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 71  CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 126

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 127 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 178

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 179 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 238

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 239 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 288


>gi|91204447|emb|CAJ70947.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 489

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 86/243 (35%), Gaps = 17/243 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C +       +  ++  I + + EM+++ +     +++             E 
Sbjct: 213 CPFPCTFCVYP-QTLMGRGFRQRSINNVVEEMEYITKNFPQAKAV-----------FFED 260

Query: 87  QNIALILDGIAKN--WTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             + +      +     +   V I+  AN    ++    +  + AG   + +G +S  +Q
Sbjct: 261 DTLTVNKKRCKELAECIIQKKVNISWTANARVGLDYETMRTMKTAGCRSLCVGFESGSQQ 320

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L  + +  + +E  A +  A+     +    +  LP +T    +  LQ A     D   
Sbjct: 321 VLDNMKKKLSLAEMEAFMANAKKAGMLIHGCFMAGLPGETKETLQETLQLAKRLNPDTAQ 380

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN-LTQSITSAHGLHAYEISNHSFLGAE 262
            Y + +  GT  Y  +K+  L+             L  ++ S   L +Y++         
Sbjct: 381 FYPVMVYPGTEAYTWYKEKRLITTDNFSEWLTPEGLHNTVISTEELSSYDLVRFCDGARR 440

Query: 263 SLH 265
           S +
Sbjct: 441 SFY 443


>gi|297570351|ref|YP_003691695.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296926266|gb|ADH87076.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 492

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC F     R    +   + + + E++      G R I  I       +L    
Sbjct: 223 CNRHCLYC-FQIDKSRKSGIRYRSVDNVMAEIRHCLAQ-GYREIKFIDD-----TL--AA 273

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    ++   +      +      A  + V++   + +++AG   I  G +S  ++ L  
Sbjct: 274 DYQRAMELARRIKEEQLDFTWFASACVNQVDLPLLKAFKEAGCWAILFGAESGVQKDLNT 333

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     +   A+  A+     +    I+ +P QT       ++ AL    D  + + L
Sbjct: 334 IRKGITPGQIKKAVAAAKEAGITVYTPFIFGIPGQTFEDGLKSIEFALELDPDIANFHAL 393

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 394 TPFPGTELW 402


>gi|29349533|ref|NP_813036.1| hypothetical protein BT_4125 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|298385029|ref|ZP_06994588.1| radical SAM protein, family [Bacteroides sp. 1_1_14]
 gi|29341442|gb|AAO79230.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|298262173|gb|EFI05038.1| radical SAM protein, family [Bacteroides sp. 1_1_14]
          Length = 324

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 70/217 (32%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E +       P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKSIATQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +    +   +   +     +  G++S  +++LR +
Sbjct: 101 LKRKYEEALQVDGVVGLVIGTRPDCMPEELLQYLEELNRHTFLMVEYGIESASDETLRRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T      +     +  +  L ++QL 
Sbjct: 161 NRGHTYADTVEAVQRTAACGILTGGHVILGLPGETHDTMVEQAGILSALPLSTLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     +++            +  +L       
Sbjct: 221 LIRGTRMAHEYEENPEGFHLFTEVDEYIDLVIDYVEH 257


>gi|298206730|ref|YP_003714909.1| putative SAM/TRAM family methylase protein [Croceibacter atlanticus
           HTCC2559]
 gi|83849361|gb|EAP87229.1| putative SAM/TRAM family methylase protein [Croceibacter atlanticus
           HTCC2559]
          Length = 482

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 27/213 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    QS L E++ + +       L G    S +++GGG 
Sbjct: 179 CDNMCTFC---VVPFTRGRERSRDPQSILDEVRNLSENGYKEITLLGQNVDSYLWYGGGM 235

Query: 81  ---PSLIEPQN------IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG- 129
               S   P           +L  +A+ +    N+ I     NP  +  +  +       
Sbjct: 236 KKDFSKATPMQQATATGFPQLLKMVAETF---PNMRIRFSTSNPQDMTEDVIKTMAAYSN 292

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQ 186
               I L VQS  ++ L+ + R H   E  + I    A      +S D+I   P +T   
Sbjct: 293 ICKHIHLPVQSGSDRILKEMNRLHTREEYFSLIDTIRAYMPDCSISQDMIIGFPTETEQD 352

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            +  L        +   +Y+ +   GT+  +  
Sbjct: 353 HKDTLSLMEKVQYNFGYMYKYSERPGTMAGRKM 385


>gi|311280443|ref|YP_003942674.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           SCF1]
 gi|308749638|gb|ADO49390.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Enterobacter cloacae
           SCF1]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 74/229 (32%), Gaps = 20/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRVRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I   R   P   +S D I   P +T   +E  ++    
Sbjct: 268 SGSDRVLNLMGRTHTALEYKAIIRKLREARPDIQISSDFIVGFPGETTDDFERTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              D    +  +   GT    M  D       + + +    + Q   + 
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVDDVAEEEKKQRLYILQERINQQAMAW 376


>gi|255014676|ref|ZP_05286802.1| hypothetical protein B2_12259 [Bacteroides sp. 2_1_7]
          Length = 308

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFSPEYCHTEKSVTEQLEEGVRFFSRKYPDMR-YLAYFQAYTNTY---DRLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           ++    +         + +   P  +     + F    +     I  G++S  +++L  +
Sbjct: 101 LIRKYEEALAYPGVEGLIVGTRPDCMPEGLLDYFAELSQRKFVMIEYGLESTLDKTLVRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E+ +AI             LI  LP ++  +            +  L L+QL 
Sbjct: 161 NRGHTHEESESAIRRTAAKGIYTGAHLILGLPGESRDEILHHADVLSRLPITTLKLHQLQ 220

Query: 209 IEKGTLFYK--MHKDGDLVLPSENVAVDLYNLTQSIT 243
           + K T   K       D  L + +  ++L        
Sbjct: 221 LIKNTRMAKEFKEDPSDFHLYTADEYIELVIDFIERL 257


>gi|221632382|ref|YP_002521603.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Thermomicrobium roseum DSM 5159]
 gi|221157157|gb|ACM06284.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermomicrobium roseum
           DSM 5159]
          Length = 458

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 21/250 (8%)

Query: 12  TGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
            GQ    +  +V   + C   C YC       R    +   ++  + E++ +    G R 
Sbjct: 151 EGQADPEVTAFVPVIYGCNFVCSYC---IVPYRRGRERSRPVEQVVAEVEKLAAR-GVRE 206

Query: 71  ISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
           ++ +      +G   P      ++A +L+ +     +       + ++P        +  
Sbjct: 207 VTLLGQTVNAYGHDLP---GQPDLADLLERVHDVPGIERIRF--LTSHPKYFSDKLIRAV 261

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPK 181
                    ++L VQS + + LR + R++   E    I   R + P +  S D+I   P 
Sbjct: 262 ADLPKVCEHVNLPVQSGDNEVLRRMRRHYTVEEYRERIARIRELIPDVTLSTDIIVGFPG 321

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T  Q+    +       D + +   +   GTL  +   D                  Q 
Sbjct: 322 ETEEQFLNTYRLLEEIRFDKVHVAMYSPRPGTLSARWPDDVPREEKRRRHRAV--EQLQE 379

Query: 242 ITSAHGLHAY 251
             +      Y
Sbjct: 380 RIARERNERY 389


>gi|170767811|ref|ZP_02902264.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia albertii
           TW07627]
 gi|170123299|gb|EDS92230.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia albertii
           TW07627]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 75/232 (32%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    M  D       + + +    + Q   + 
Sbjct: 325 ITDVNFDMSYSFIFSARPGTPAADMVDDVSEEEKKQRLYILQERINQQAMAW 376


>gi|157146729|ref|YP_001454048.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Citrobacter
           koseri ATCC BAA-895]
 gi|157083934|gb|ABV13612.1| hypothetical protein CKO_02502 [Citrobacter koseri ATCC BAA-895]
          Length = 488

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 171 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 226

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 227 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 281

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 282 SGADRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQTMKLIAD 341

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 342 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 388


>gi|160915264|ref|ZP_02077477.1| hypothetical protein EUBDOL_01272 [Eubacterium dolichum DSM 3991]
 gi|158433063|gb|EDP11352.1| hypothetical protein EUBDOL_01272 [Eubacterium dolichum DSM 3991]
          Length = 480

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 17/221 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E   ++    +  +R L           G    S  +  
Sbjct: 199 CDKFCTYC-----IVPYTRGKERS-RAMEDILDEVRILKEEGYKEVTLLGQNVNSYGKDA 252

Query: 88  NIA----LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            I      +L+  AK   +         ++P            +    +  I L VQS +
Sbjct: 253 GIVGGFASLLEETAK---IGIERIRFTTSHPWDFTDEMIDVIARYDNIMPFIHLPVQSGD 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ +GR +   + +   H  +   P   +S D+I   P ++  Q+E  L        
Sbjct: 310 SEILKIMGRRYTREQYLTLFHKIKERMPNCAISTDIIIGFPNESEEQFENTLSLVDECQF 369

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           D+   +  +  +GT   +M  +  L +    +A       Q
Sbjct: 370 DNAFTFIYSPREGTPAARMADNVSLEVKQHRLARLNERWNQ 410


>gi|164688504|ref|ZP_02212532.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
           16795]
 gi|164602917|gb|EDQ96382.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
           16795]
          Length = 445

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 74/218 (33%), Gaps = 18/218 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  KC YC     + + +     +    + ++    +    R +  +       +     
Sbjct: 155 CDNKCTYC----IIPKLRGK---YRSRKMEDIIAEAKKLAERGVKELVVIAQDTTKYGLD 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +A +L+ +A+           + + P S+     +  +K     N   + +Q  
Sbjct: 208 LYGEEKLANLLEELAQIEGFKWIR--VMYSYPESITEELVKVIKKYDNICNYFDMPIQHA 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R     + ++ I++ R+     +    +I   P +T   +    +      
Sbjct: 266 SNRVLKLMNRKTTKEDILSKINMIRSHISDATLRTSIIVGFPGETEEDFNELAEFIKEAQ 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
            D L ++  + E+ T   K+    +  +  E     + 
Sbjct: 326 FDKLGVFTYSREEDTPADKLPNHLEEEVKVERQEALMM 363


>gi|299768718|ref|YP_003730744.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           sp. DR1]
 gi|298698806|gb|ADI89371.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
           sp. DR1]
          Length = 483

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLQAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|293610875|ref|ZP_06693175.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827219|gb|EFF85584.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 483

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGT 80
           C  YC F              +   L E+  + +  G R IS +           F GG 
Sbjct: 192 CSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAE-KGVREISLLGQNVNGYRGETFEGGI 250

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +         +L  +A+   +      T  ++P        Q Y      V+ + L VQ
Sbjct: 251 CTF------PELLRLVAEIPGIGRLRYTT--SHPLEFSDELIQCYEDLPQMVSHLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + RNH     I  I   R I P   +S D I   P +T   +   LQ    
Sbjct: 303 SGSNDVLQAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFIKD 362

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DH   +  +   GT 
Sbjct: 363 LDFDHSYSFVYSKRPGTP 380


>gi|239626797|ref|ZP_04669828.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516943|gb|EEQ56809.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 308

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 81/227 (35%), Gaps = 16/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQW-----MRQLTGPRSISSIFFGGGTPSLIEP 86
           C +C                + S   +++       R+++GP S    +F   T +    
Sbjct: 46  CIFCS----AGGSGDFAAPVMDSVHEQIEAAKLQVQRKMSGPGS-YIAYFQSYTNTYAPL 100

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQ 143
            ++  I     ++  +++   +++   P  +        R+    +   + LG+Q++ E 
Sbjct: 101 SHLRAIFTDAIRHPDIAA---LSVATRPDCLGPEVVDLLRELNSIKPVWVELGLQTIHES 157

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + RF+ R +      +A+   +     +   +I  LP +T       ++      VD + 
Sbjct: 158 TARFIRRGYPLPVFESALLRLKEAGITVIVHIILGLPGETREMMLETVRYLAKGVVDGIK 217

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  L I  GT   ++++D    + S    +DL      +        
Sbjct: 218 LQLLHILNGTDLARIYRDTPFPVLSMEEYLDLVIDCVELLPPDMTIH 264


>gi|92115654|ref|YP_575383.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter hamburgensis
           X14]
 gi|123083888|sp|Q1QS74|MIAB_NITHX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91798548|gb|ABE60923.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrobacter hamburgensis
           X14]
          Length = 473

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 68/200 (34%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + ++Q +    G R I+    ++    G    
Sbjct: 166 CDKFCTFC---VVPYTRGAEVSRPVAKIVEDVQRLAD-NGVREITLIGQNVNAYHGDGPD 221

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P     +L    +   +   V +     +P  VE +  + +R  G  +  + L VQS 
Sbjct: 222 GRPWPFGKLL---HRLADIPGIVRLRYSTSHPRDVEDSLIEAHRDLGALMPFVHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A +    +   R++   +  S D I   P +T   +   L       
Sbjct: 279 SDRILEAMNRRHTADDYRRVVDRFRHVRQDIAFSSDFIVGFPGETEQDFTATLALVTQIG 338

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
                 ++ +   GT   +M
Sbjct: 339 YAGAYSFKYSPRPGTPAAEM 358


>gi|126175461|ref|YP_001051610.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           baltica OS155]
 gi|229890648|sp|A3D7M8|MIAB_SHEB5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|125998666|gb|ABN62741.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella baltica OS155]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GAICTFAELLRFVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R      ++S D I   P +T   +   ++       DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKAREGIQISSDFIIGFPGETKEDFADTIKLIEDIGFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  + D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDNVDMEEKKQRLAILQDRITQQAMRY 376


>gi|331268321|ref|YP_004394813.1| hypothetical protein CbC4_0133 [Clostridium botulinum BKT015925]
 gi|329124871|gb|AEB74816.1| conserved hypothetical radical SAM protein [Clostridium botulinum
           BKT015925]
          Length = 310

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 80/241 (33%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G  NF I S    ++ M +    +   
Sbjct: 36  CPNRDGTISKGGCIYCSERGSGDF--------AGDRNFSISSQFDNIKEMMKNKWKQGKY 87

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--- 129
             +F   T +      ++ +     +       V ++I   P  +         +     
Sbjct: 88  IAYFQAYTNTYAS---VSELRKKYEEAINQDGVVALSIATRPDCLSDEIIDLISEYNKKL 144

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q+  E + + + R +       +++  R     +    I+ LP +       
Sbjct: 145 YTWVELGLQTSNESTAKIINRGYKLPVFEDSLNRLRTRNIDVVVHTIFGLPGEEKEDMLN 204

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++      +  + ++ L + KGT   K+++ G L    ++  +D+     S+   + + 
Sbjct: 205 TIKYLREKDIQGIKIHLLHLLKGTPMVKLYEQGKLKFLEQDEYIDIIAEAVSLLPQNIVI 264

Query: 250 A 250
            
Sbjct: 265 H 265


>gi|260597078|ref|YP_003209649.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cronobacter
           turicensis z3032]
 gi|260216255|emb|CBA29180.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Cronobacter turicensis z3032]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC                    + E+  +    G R ++ +           + 
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPGDDIVLEIAQLAAQ-GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNMMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETQQDFEQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|225567883|ref|ZP_03776908.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
           15053]
 gi|225163361|gb|EEG75980.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
           15053]
          Length = 307

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 83/220 (37%), Gaps = 21/220 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF S     K+     I+    +++   +  G   I+  +F   T +   
Sbjct: 48  CIFCSEGGSGDFAS---DRKLTVTEQIE--CGKLRTAGKYAGSSYIA--YFQAYTNTYAP 100

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
              +  I    A++  V     I+I   P  ++ +     +  R+     + LG+Q++ E
Sbjct: 101 LPYLRRIFTEAARHPDVR---IISIATRPDCLDKDVISMLEDIRRIKPVWVELGLQTIHE 157

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++  F+GR ++      A  + ++    +    I ALP + ++     L       +  L
Sbjct: 158 ETAAFIGRGYSLPVFEQAAAMLQDAGIDVIVHTILALPGEDLSMMLDTLHYLNGAGIQGL 217

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L  L + +GT     ++     +PS       Y L + I
Sbjct: 218 KLQLLHVLRGTALAAYYEAHPFWIPSMEE--YFYLLGRCI 255


>gi|168186437|ref|ZP_02621072.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum C str. Eklund]
 gi|169295584|gb|EDS77717.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum C str. Eklund]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 90/244 (36%), Gaps = 20/244 (8%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CD    + + +  +   ++    +++  R+      +  IF   G   +++ 
Sbjct: 25  CSHNKCTFCD----MYKDRSFKIKSLEEVFEDLELSRKYYKY--VKRIFLADGDALILKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +N+  IL  I +         + +   P  +      +    +  G++ I +GV+S  ++
Sbjct: 79  ENLEKILIRIKEL--FPECERVAVYGTPGDILRKSEEDLIKLKNLGLDIIYIGVESGSDE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW----EMELQRALSYAV 199
            L+ + +   + E I A    +    ++S  LI  L      +W    +   +   +   
Sbjct: 137 VLKDVNKGVTSEEMIKAGQKVKRTGIKLSATLISGLGG--KEKWQQHAKESARVISAINP 194

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT--SAHGLHAYEISNHS 257
           D+L +  L    GT  ++   + ++ L +    +                  +   SN++
Sbjct: 195 DYLGILTLMNAPGTEMHEKIANKEITLLNPKEVMVETRELIRHLEVENCVFRSNHASNYA 254

Query: 258 FLGA 261
            L A
Sbjct: 255 PLAA 258


>gi|91209704|ref|YP_539690.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli UTI89]
 gi|117622870|ref|YP_851783.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           APEC O1]
 gi|218557592|ref|YP_002390505.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli S88]
 gi|122424608|sp|Q1REQ5|MIAB_ECOUT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890519|sp|B7MFS7|MIAB_ECO45 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890527|sp|A1A8S9|MIAB_ECOK1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91071278|gb|ABE06159.1| hypothetical protein UTI89_C0659 [Escherichia coli UTI89]
 gi|115511994|gb|ABJ00069.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           APEC O1]
 gi|218364361|emb|CAR02036.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           S88]
 gi|294489495|gb|ADE88251.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli IHE3034]
 gi|307627908|gb|ADN72212.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli UM146]
 gi|315287089|gb|EFU46503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS
           110-3]
 gi|323952768|gb|EGB48636.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H252]
 gi|323958414|gb|EGB54120.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli H263]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|266625332|ref|ZP_06118267.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
 gi|288862771|gb|EFC95069.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Clostridium hathewayi DSM 13479]
          Length = 84

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 319 EFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE---CERNLQRQGFIERVQFSR 375
           E LS + + +EF+ +GLRL  G+S + +    G+++          L+R+G +E  +   
Sbjct: 5   EQLSVKSKMEEFMFLGLRLTRGVSAEGFITRFGQSIRNVYGGVIDKLEREGLLEH-KNGY 63

Query: 376 LRCTQRGMTMLDSVIANLAV 395
            R T+RG+ + +  ++   +
Sbjct: 64  YRLTERGLDLSNYAMSLFLL 83


>gi|254295429|ref|YP_003061452.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Hirschia
           baltica ATCC 49814]
 gi|254043960|gb|ACT60755.1| RNA modification enzyme, MiaB family [Hirschia baltica ATCC 49814]
          Length = 455

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 16/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + + + E++ +    G + I+ +      F G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGAEFSRNVDAIVAEVRGLAAQ-GVKEITLLGQNVNAFHGAAPD 221

Query: 83  LIEPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGVQS 139
             E +  +  +L  +AK   +      T  ++P  +E +    Y +  V      L VQ+
Sbjct: 222 GGEGEWGLGQLLRHLAKIGGLERLRFTT--SHPKDMEEDLITAYGELDVLMPYFHLPVQA 279

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R+H A   I  +   R   P ++   D I   P +T   +E  +      
Sbjct: 280 GSNKILKSMNRSHTAESYIETMKQIRAQRPDVALASDFIVGFPGETDEDFEATMDLVREV 339

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                  ++ +   GT   +M    D  +  E +      + +  T  + 
Sbjct: 340 KYASAYSFKYSRRPGTPGAEMFGQVDEAVKDERLQRLQALIREQTTEFNN 389


>gi|215485694|ref|YP_002328125.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312965102|ref|ZP_07779339.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 2362-75]
 gi|331656683|ref|ZP_08357645.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA206]
 gi|215263766|emb|CAS08102.1| isopentenyl-adenosine A37 tRNA methylthiolase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|281177809|dbj|BAI54139.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|312290193|gb|EFR18076.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Escherichia coli 2362-75]
 gi|315299188|gb|EFU58442.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli MS 16-3]
 gi|331054931|gb|EGI26940.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Escherichia coli TA206]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|307822344|ref|ZP_07652576.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter
           tundripaludum SV96]
 gi|307736910|gb|EFO07755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter
           tundripaludum SV96]
          Length = 438

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 18/200 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   + E+  + +  G R I+ +      + G     ++
Sbjct: 144 CSKYCTFCVVPYTRGEEISRPLDDVIAEITSLAKQ-GVREINLLGQNVNAYRGE----MD 198

Query: 86  PQNI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +I    +L            +  T   +P        + + +    V+ + L VQS  
Sbjct: 199 DGDIADFALLLHYVAAVEGIDRIRFTTS-HPMEFTDELIEAFAEIPQLVDHLHLPVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H  ++ I  I   R + P +  S D I   P +T  ++E  +        
Sbjct: 258 DHILKMMKRGHARADYIEIIRKLRAVRPNIYLSSDFIIGFPGETDAEFEETMSFIEEIGF 317

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    + 
Sbjct: 318 DLSFSFVYSQRPGTPAADLP 337


>gi|213161683|ref|ZP_03347393.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 383

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T +     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GTTGTF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|229890690|sp|A8AJE9|MIAB_CITK8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGADRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTQDFEQTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|197304054|ref|ZP_03169083.1| hypothetical protein RUMLAC_02788 [Ruminococcus lactaris ATCC
           29176]
 gi|197296879|gb|EDY31450.1| hypothetical protein RUMLAC_02788 [Ruminococcus lactaris ATCC
           29176]
          Length = 321

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNI 89
           C +C   S +                       L   R + S   +F   T +    + +
Sbjct: 60  CIFC---SGMGSGDFAGSASFSICEQLAAGKAALQAKRPVHSYIAYFQAFTNTYAPVEYL 116

Query: 90  ALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
             I         +  +V++  +   P  +     +  R+    +   I LG+Q++  Q+ 
Sbjct: 117 EKIFTEA----ILDPDVQVLAVATRPDCLSHETVELLRRLNQIKPVWIELGLQTIHPQTA 172

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R++ R +       A+   +    ++   +I  LP +T  Q    +       +D + L 
Sbjct: 173 RYIRRGYPLEVFDDAVVRLKAAGIQVITHVILFLPGETEAQMLKTIDYLNCNPIDGIKLQ 232

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L I KGT   + +      +P  +  +       +      +  
Sbjct: 233 LLHILKGTDLARDYARSPFHIPDMDEYIRCIGNCIAHLRPDIVIH 277


>gi|328948387|ref|YP_004365724.1| hypothetical protein Tresu_1527 [Treponema succinifaciens DSM 2489]
 gi|328448711|gb|AEB14427.1| Conserved hypothetical protein CHP01212 [Treponema succinifaciens
           DSM 2489]
          Length = 309

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 79/239 (33%), Gaps = 28/239 (11%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF +     K+  E   +   +  ++ + +   +    
Sbjct: 29  CPNRDGTKGTGGCTFCSQGGSGDFAAKPAPIKIQIEEAKKRVDS--KFPKSIPPEKRKYI 86

Query: 74  IFFGGGTPSL----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +F   T +     I  + +  I  G      +   V I+I   P  +     +   K  
Sbjct: 87  AYFQSYTNTYTDKNITIEKLREIFFGAISRPEI---VAISIGTRPDCITDEILELLCKLN 143

Query: 130 VNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             +   I LG+Q++ EQ+ R + R +   E     +  ++    +   +I  LP ++   
Sbjct: 144 KIKPVWIELGLQTIHEQTARKINRGYTLKEFENCFYKLKSAGIEVIAHIILGLPGESKEL 203

Query: 187 WEMELQRALSYA--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               ++         + + +  L I +GT   + +K+    L       +       I 
Sbjct: 204 MLQTVKYLSKLNPKPNGIKIQLLHILEGTKMAQEYKENHFKLFELEEYCEFVCKCLKIL 262


>gi|315127051|ref|YP_004069054.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Pseudoalteromonas sp. SM9913]
 gi|315015565|gb|ADT68903.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Pseudoalteromonas sp. SM9913]
          Length = 468

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 18/234 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   L E+  + +  G R +     ++    G       
Sbjct: 145 CSKYCTFCVVPYTRGEEVSRPVDDVLLEVAQLAEQ-GVREVNLLGQNVNAYRGDT---HD 200

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    D I     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 201 GEICYFSDLIRLVAAIDGIDRIRYTTSHPVEFTPDIIDAYADVPELVDHLHLPVQSGSDR 260

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R I P +S   D I   P ++   +E  +        D 
Sbjct: 261 VLNLMKRGHTALEYKSTIRKLRKIRPNLSMSSDFIIGFPGESKADFEATMNLINDIGFDM 320

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +  +   GT    +       +  +     LY L   IT      + ++ +
Sbjct: 321 SFSFIYSARPGTPAADLPD----DVTEQEKKERLYLLQNRITQMAQQISRQMFD 370


>gi|301061566|ref|ZP_07202328.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300444374|gb|EFK08377.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 490

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 69/215 (32%), Gaps = 16/215 (7%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C +C     F  H+ RY+        S    ++ +  L G   I  I       +L
Sbjct: 224 CPFNCTFCCINALFGKHMIRYR--------SLNKVIEELEFLVGTYGIKDIKIIDEMFAL 275

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
               N   I+           ++ I   A  ++V        ++AG+N ++ G +S   +
Sbjct: 276 ----NEKRIVSLCDMIIARGFDLNIWAYARVNTVTEKMLTKMKQAGINWVAYGFESGSRR 331

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            +  + + +        + +       +  + I+ LP+         L+  L    +  +
Sbjct: 332 VIEDVTKGYTVDMVAKVVEMTYAEGLHICANYIFGLPEDDYDSMHETLKLMLDINAEWAN 391

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +Y      G+  Y +       LP        Y  
Sbjct: 392 IYCTMAYPGSKLYDLAIQNSWQLPETWEGYSQYAY 426


>gi|237707370|ref|ZP_04537851.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226898580|gb|EEH84839.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 486

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 169 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 224

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 225 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 279

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 280 SGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKLIAD 339

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 340 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 386


>gi|319902401|ref|YP_004162129.1| Radical SAM domain protein [Bacteroides helcogenes P 36-108]
 gi|319417432|gb|ADV44543.1| Radical SAM domain protein [Bacteroides helcogenes P 36-108]
          Length = 487

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 8/204 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +     
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFT----A 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           N   +LD             +    N    +++      +KAG   I  G++S  +Q L 
Sbjct: 271 NKKRVLDICRLLMERKLQKRLKWLCNARVDLDLETMCIMKKAGCRLIIPGIESGNQQILD 330

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +    +  A+     +    +     +T       L+ AL    D    + 
Sbjct: 331 NIKKGTKVEQFYEYVANAKKAGLLIHACYMIGNNGETKETMAETLRLALKLNTDTAQFFP 390

Query: 207 LTIEKGTLFYKMHKDGDLVLPSEN 230
           L    GT  Y+  +    ++   +
Sbjct: 391 LIPYPGTEAYQWARTNGYIVTDYD 414


>gi|319651928|ref|ZP_08006051.1| YtqA protein [Bacillus sp. 2_A_57_CT2]
 gi|317396420|gb|EFV77135.1| YtqA protein [Bacillus sp. 2_A_57_CT2]
          Length = 322

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   S    +   + + +++    ++              +F   T +    + +  
Sbjct: 54  CTFCS-ASGSGDFAGNRADDLETQFNAIKTKMHHKWKDGKYMAYFQAFTNTHAPVEVLR- 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             D   +       V ++I   P  +  +  +   +        + LG+Q++ E++   +
Sbjct: 112 --DMYERVLEQDGVVGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHERTALLI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R    R+   +I  LP +T        +      V  + ++ L 
Sbjct: 170 NRAHDYQCYAEGVKKLRKHGIRICSHIINGLPLETPDMMMETAREVAKLDVQGIKIHLLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K  + G L   S N  V+L      I     +  
Sbjct: 230 LLKGTPMVKQFEKGMLEFLSLNEYVNLVCDQLEILPPEMIVH 271


>gi|268609349|ref|ZP_06143076.1| Fe-S oxidoreductase [Ruminococcus flavefaciens FD-1]
          Length = 315

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 76/216 (35%), Gaps = 11/216 (5%)

Query: 32  CPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C +CD  S +     +     +++    +    + +        +F   T +    + + 
Sbjct: 55  CIFCDGGSGYFTSPLLSVAAQLEAEYKRISAKHKESA----VIAYFQANTNTYAPDRKLR 110

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV---NRISLGVQSLEEQSLRF 147
            +   +     V     I+I      +         +        + LG+QS+ ++++R+
Sbjct: 111 EVFFSVLDYPYVKG---ISIGTRADCLSDEVLDLLSELNNVTDLTVELGLQSVHDETIRY 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R    +E +      +    R    +I  LP +         ++    A + + L  L
Sbjct: 168 INRCCTHAEFLDGYKKLKERHIRTCLHIINGLPGEDAEMMIETSRQIAELAPEGVKLQML 227

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            + +GT   +++++G   L S +  +D+      + 
Sbjct: 228 HVIRGTRLAEIYENGGFTLLSRDEYIDIIVRQLELL 263


>gi|260582067|ref|ZP_05849862.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus influenzae
           NT127]
 gi|260094957|gb|EEW78850.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus influenzae
           NT127]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  +    G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|293376256|ref|ZP_06622499.1| MiaB-like protein [Turicibacter sanguinis PC909]
 gi|325845151|ref|ZP_08168460.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1]
 gi|292645148|gb|EFF63215.1| MiaB-like protein [Turicibacter sanguinis PC909]
 gi|325488816|gb|EGC91216.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1]
          Length = 434

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 93/269 (34%), Gaps = 27/269 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +   +    +  Q     +  ++QL        +  G  T +    +
Sbjct: 153 CNNFCTYC----IIPWARGTVRS--QKPEIVIDQVKQLVANGHCEVVLTGIHTAAYGEDL 206

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
           E  +   +L  + K   +      +IEA+   +  +     +     VN + + +Q+   
Sbjct: 207 EDYSFGKLLQDLIKIDGLKRIRISSIEAS--EMTDDVITAMKMSDKIVNHLHMPLQAGSN 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +  +E  A +   R +F  ++   D+I   P +T   +   ++        
Sbjct: 265 EILKGMKRPYTLAEFEAKVKELRELFDNLAITTDVIVGFPGETEELFNETVETIKRIGFS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV---LPSENVAVDLYNLTQSITSAHGLHAYEI---- 253
            L ++  ++  GT   +M      +   +    +      L +   S+      ++    
Sbjct: 325 ELHVFPYSVRNGTPAARMENQVPEMVKSMRVNKLLALSEQLAKEYASSCEGKILQVIPEE 384

Query: 254 SNHSFLGAESLHNLNY-----WRYGDYIG 277
           ++H+  G    H  NY         D IG
Sbjct: 385 ASHTKEGYLVGHASNYVKVEFKGETDLIG 413


>gi|209525671|ref|ZP_03274208.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328]
 gi|209493840|gb|EDZ94158.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328]
          Length = 436

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 16/222 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           ++  E+    +  +++  +V+  + C ++C YC            Q    ++   EM+ +
Sbjct: 116 INIVEDITKPRRDSNITAWVNVIYGCNERCTYC---VVPNVRGTEQSRTPEAIRAEMEEL 172

Query: 63  RQLTGPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            +  G + ++ +      +G   P S  + ++   + D +     +     I     +P 
Sbjct: 173 AR-AGYKEVTLLGQNIDAYGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPR 231

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RM 171
                  +   +         +  QS +   L+ + R +   +    I+  R   P   +
Sbjct: 232 YFTERLIRACAELPKVCEHFHIPFQSGDNDVLKAMARGYTHEKYRRIINTIREYIPDASI 291

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           S D I   P +T  Q+E  L+       D L+    +   GT
Sbjct: 292 SADAIVGFPGETEAQFENTLKLVDDIGFDLLNTAAYSPRPGT 333


>gi|78043523|ref|YP_360009.1| putative tRNA modifying protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123770593|sp|Q3ACX5|RIMO_CARHZ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|77995638|gb|ABB14537.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 438

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC   +            +   L E++   +      I  I       +     
Sbjct: 150 CDNRCTYC---TIPAIRGKYTSRPLDDILEEIKDTLKQG----IKEIILVAQDTTAYGID 202

Query: 88  NI--ALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 +++ + K  ++  N  + +    P  +        ++    +  + + +Q +  
Sbjct: 203 LYGEFKLVELLRKIGSIKGNFWVRLMYLYPDKITPELINEIKENPKVIKYVDVPLQHIHP 262

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  ++ E I+ +   R   P ++     I   P +T  Q+   L     +  +
Sbjct: 263 EILKKMGRKGSSEEIISTLERLRKEIPDITIRTTFIVGFPGETEEQFNYLLDFVKKFKFN 322

Query: 201 HLSLYQLTIEKGTLFYKM 218
            L  +    EKGT   KM
Sbjct: 323 RLGAFPYYREKGTPAAKM 340


>gi|83592518|ref|YP_426270.1| MiaB-like tRNA modifying enzyme [Rhodospirillum rubrum ATCC 11170]
 gi|83575432|gb|ABC21983.1| MiaB-like tRNA modifying enzyme [Rhodospirillum rubrum ATCC 11170]
          Length = 441

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 74/228 (32%), Gaps = 19/228 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPS 82
           C  +C +C   F +      V     +      +    +      +    +G    G PS
Sbjct: 167 CDHRCTFCIIPF-ARGNSRSVPMGRIVDQIRALVAAGYREVVLTGVDITAYGPDLPGAPS 225

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   Q +  +L  +     +          +P  V+ +           +  + L VQ+ 
Sbjct: 226 L--GQMVRRLLRAVPDLPRLR-----LSSLDPVEVDEDLLALVASEPRLLAHLHLSVQAG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H   + IA     R +     +  D+I   P +T   +   L       
Sbjct: 279 ADLILKRMKRRHLRDDVIALAQRLRTLRPGMALGADIIVGFPTETEEHFAQSLALVEEAG 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           + HL ++  +   GT    M +        ++ A  L    ++  +AH
Sbjct: 339 LTHLHVFPYSPRPGTPAALMPQVDKA--VVKDRARRLREAGEAALAAH 384


>gi|297544440|ref|YP_003676742.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842215|gb|ADH60731.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 562

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 87/277 (31%), Gaps = 48/277 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC                + S   ++++       + +      G    ++  +
Sbjct: 181 CPFKCAYC----------------LSSIDNKLRYESIEKVEKDLKWFVDKGVK--IL--K 220

Query: 88  NIALILDGIAKN--------WTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQ 138
            I    +   K           +  ++    E NP  V+    +  +      +  +G+Q
Sbjct: 221 LIDRSFNANRKRAKEILNIMKKIGGDIVFHCEVNPELVDKEFIEELKGLEKRIQFEVGIQ 280

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  + SL+ + R     +++  I L +    ++  DLI  LP+ +   +        +  
Sbjct: 281 TTNKNSLKKISRTTAVEKSLRGIKLLKEAGIKLHVDLIAGLPEDSFKTFSKAFDDVYNLK 340

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVL---PSENVAVDLYNLTQS--ITSAHGL--HAY 251
            D + L  L + KGT   +  ++ ++V    P   V        Q   I        + Y
Sbjct: 341 PDEIQLGFLKVLKGTPLKRKVEEFNIVYNSKPPYEVLYTKDISYQELVILKGIAFLLNKY 400

Query: 252 EISNHSFLGAESLHN------------LNYWRYGDYI 276
             S       E L N              YW+    +
Sbjct: 401 YNSGKFKKALEYLENKFKRPFDFYLEFYKYWKENKLL 437


>gi|220909156|ref|YP_002484467.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cyanothece sp.
           PCC 7425]
 gi|219865767|gb|ACL46106.1| RNA modification enzyme, MiaB family [Cyanothece sp. PCC 7425]
          Length = 446

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 86/250 (34%), Gaps = 16/250 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L   E+    +  +S+  +V+  + C ++C YC          V Q     +   E++ +
Sbjct: 131 LQIVEDITKPRRDSSVTAWVNVIYGCNERCTYC---VVPNVRGVEQSRTPAAIRAEIEEL 187

Query: 63  RQLTGPRSISSI-----FFGGGTPSLIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            +  G + ++ +      +G   P +    ++   + D +     V     I     +P 
Sbjct: 188 ARQ-GYKEVTLLGQNIDAYGRDLPGVTPEGRHQHTLTDLLYYIHDVPGIERIRFATSHPR 246

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RM 171
                  +   +         +  QS +   L+ + R +   + +  I   R+  P   +
Sbjct: 247 YFTERLIRACAELPKVCEHFHIPFQSGDNDILKAMARGYTREKYLGIIEKIRSYMPDASI 306

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S D I   P +T  Q+   L+   +   D L+    +   GT   +        + S+ +
Sbjct: 307 SADAIVGFPGETEAQFINTLELVETVGFDQLNTAAYSPRPGTPAAQWQNQLPEEVKSDRL 366

Query: 232 AVDLYNLTQS 241
               + + Q 
Sbjct: 367 QRLNHLVAQK 376


>gi|68248570|ref|YP_247682.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           influenzae 86-028NP]
 gi|148825700|ref|YP_001290453.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           influenzae PittEE]
 gi|229846938|ref|ZP_04467044.1| lipoyl synthase [Haemophilus influenzae 7P49H1]
 gi|81337003|sp|Q4QPM5|MIAB_HAEI8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890550|sp|A5UBB9|MIAB_HAEIE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|68056769|gb|AAX87022.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|148715860|gb|ABQ98070.1| lipoyl synthase [Haemophilus influenzae PittEE]
 gi|229810022|gb|EEP45742.1| lipoyl synthase [Haemophilus influenzae 7P49H1]
          Length = 474

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 64/200 (32%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTNDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|18978284|ref|NP_579641.1| hypothetical protein PF1912 [Pyrococcus furiosus DSM 3638]
 gi|18894107|gb|AAL82036.1| hypothetical protein PF1912 [Pyrococcus furiosus DSM 3638]
          Length = 425

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C+  C YC      R  +   +++     ++     ++   +     +  +  +G    +
Sbjct: 148 CLNGCTYCA----TRSARGVLKSYSPEKIVEWVKWAIRQGYKEIWLSAEDTGCYGFDIGT 203

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGV 137
                N+A +LD I     +     I +   NP+          + Y+   V   + L V
Sbjct: 204 -----NLAKLLDEITA---IEGEFRIRVGMMNPNHVLKFLDELIEAYKDEKVYKFLHLPV 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS + + LR +GR +   E    ++  R  FP ++   D+I   P ++   ++  L+   
Sbjct: 256 QSGDNEILRRMGRTYTVEEFEEIVNAFRREFPDLNLHTDIIVGFPGESEEAFQRSLELIK 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               D +++ + +   GT+  K 
Sbjct: 316 RIKPDKVNVSRYSPRPGTIAAKW 338


>gi|121603302|ref|YP_980631.1| radical SAM domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120592271|gb|ABM35710.1| Radical SAM domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 552

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 19/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  KC +C          + +  +       M  M  L   R   +  F   T +L    
Sbjct: 189 CPFKCEFC-------LSSLDKTAWAFELDRFMAEMA-LLYRRGARNFKFVDRTFNLKVDF 240

Query: 85  EPQNIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRK---AGVNRISLGVQ 138
             + +   LD +         +  + +  E  P S+     +       AG  +  +G+Q
Sbjct: 241 SVRILQFFLDRMKDEAGAVQAAPGLFVHFEVVPDSL-HERLKALIAQFPAGSLQFEVGIQ 299

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S   +  + + R  + ++    +          +  DLI+ LP +T+  +     R    
Sbjct: 300 SFNPEVQQRISRKQDNAKTAENLRWLVTQSQAHVHADLIFGLPGETLQSFAEGFDRLHEL 359

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           A   +    L   +GT   +   D  +    +     L   T    +   +  +
Sbjct: 360 APHEIQFGILKRLRGTPITRHTLDFAMAYDPQTPYTILQTSTIDFATMQRIQRF 413


>gi|260494305|ref|ZP_05814436.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|260198451|gb|EEW95967.1| iron-sulfur dehydrogenase [Fusobacterium sp. 3_1_33]
          Length = 297

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 78/215 (36%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCTFCS----MYKDKKFIIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G+  + LGV+S ++++L+F
Sbjct: 85  LIQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLRKLYEKGLTLVYLGVESGDDEALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + ++G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQEGKYDYMEGIEVLKEMKLV 239


>gi|37520860|ref|NP_924237.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Gloeobacter violaceus PCC 7421]
 gi|35211855|dbj|BAC89232.1| glr1291 [Gloeobacter violaceus PCC 7421]
          Length = 457

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 16/224 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD       Y   +E+ ++  + +++            S         ++  Q
Sbjct: 205 CPYGCEYCDQPIFGATY---REHTVEQVMEDIENALAAGYSHIWFSDDIF-----MLNWQ 256

Query: 88  NIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
               I D I +       +    +      V+   F     AG  RI  G++S   + LR
Sbjct: 257 RALKICDEIHRRGLKFKWDCLGRV-----DVQRKVFARMAAAGCERIFFGIESGSPRVLR 311

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +G+  +  +   AI  A ++  R +       P +        LQ   +  +D+LS   
Sbjct: 312 QMGKRFSPQDVRQAIQDANSVGIRAAAFFQIGYPGERTEDILATLQFIPTLPLDYLSFTI 371

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                GT  +        + P      +      ++ +    H+
Sbjct: 372 TYPLPGTKLFDRVVSEGRLSP--EEQAEWKRAGHNVLTYKADHS 413


>gi|116750548|ref|YP_847235.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699612|gb|ABK18800.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 475

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 18/199 (9%)

Query: 25  WPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            PF        C  +C YC +          +    +S  ++++   +L     +  IFF
Sbjct: 194 HPFIAFYTGRGCPARCTYCLWP-QTFSGHTYRPRAAESVASDVKRAFELFPN--LKEIFF 250

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              T S     +   +LD  AK   +      T   N         +  R AG   + +G
Sbjct: 251 DDDTFS----WDKTRVLDLCAKLKPLGFTWSCTCRVNADH---EMLKAMRDAGCRLLIVG 303

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +S +   L+ + +      A++ +  AR++   +  D I  LP +T    +  ++ A  
Sbjct: 304 FESGDSGILKNVKKGATPELAMSFMKTARSLGLAVHGDFIIGLPGETRETIKTTMRFAEE 363

Query: 197 YAVDHLSLYQLTIEKGTLF 215
              + + +       GT F
Sbjct: 364 LDCETIQVSIAHPFPGTDF 382


>gi|188589299|ref|YP_001920259.1| hypothetical protein CLH_0864 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188499580|gb|ACD52716.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 434

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C +C    + R     ++         ++ +++L        I  G  T S    +
Sbjct: 152 CNRFCTFC-LIPYARGATCSKKP-----EKVIEEVKKLAEHGFKEVILSGIHTASYGVDL 205

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSL 140
                +  +L+ I K   +      +IE  P+          +  +K       L +QS 
Sbjct: 206 GAGVTLISLLEDIEKIDGIDRVRIGSIE--PAFFTDEVINKIKNMKKL-CPHFHLSLQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            + +L+ + R + A E    +   R+    +S   DLI   P +T  ++    +      
Sbjct: 263 SDATLKRMNRRYTADEYAKTVQTLRDNIQDVSITTDLIVGFPGETEEEFNETYEYLKKLK 322

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           +  + L++ +  KGT   +M    D
Sbjct: 323 LTKVHLFKYSPRKGTKAAEMPNQID 347


>gi|210623131|ref|ZP_03293597.1| hypothetical protein CLOHIR_01547 [Clostridium hiranonis DSM 13275]
 gi|210153808|gb|EEA84814.1| hypothetical protein CLOHIR_01547 [Clostridium hiranonis DSM 13275]
          Length = 310

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 12/221 (5%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFGGGTPSLIE 85
           C   KC +C          V  E  ++S       +R+  G R  I  +F   G P ++ 
Sbjct: 38  CSHNKCTFC-----TMYKDVPFE--VESMEQIEADLREARGRRKRIKKVFLENGDPFVLS 90

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              +  I + I +      N+ +     N      +  +  RK  +N +++G++S  E++
Sbjct: 91  ADKLKQIAEKIEEIIPEVENISMFATIKNIIDKTDDELKELRKLKINNLNVGIESGLEEA 150

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHL 202
           + F+ + +    A   +    N     S ++I        +    +   +         +
Sbjct: 151 VEFMNKGYTVEVAKRELKRLENAGMDYSINIITGCGGSDKSRENAKKTAELVNELNPKIV 210

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +  +  ++G+   K+   G     +    ++   L     
Sbjct: 211 FVGSIHTDEGSKLEKLKATGKFNENTLRENIEEEKLFIEKL 251


>gi|288553840|ref|YP_003425775.1| Fe-S oxidoreductase [Bacillus pseudofirmus OF4]
 gi|288545000|gb|ADC48883.1| Fe-S oxidoreductase [Bacillus pseudofirmus OF4]
          Length = 326

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 10/221 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C             ++ +  F   ++              +F   T +    + +  
Sbjct: 61  CTFCSERGSGDFAGDRSDDLVTQF-NTIKERMHHKWKSGKYIGYFQAYTNTYAPVRTLRK 119

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + I +   V   V ++I   P  +  +  +   +        + LG+Q++ E++ + +
Sbjct: 120 YYEVILEQEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTIHEETAQLI 176

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  +   R    R+   +I  LPK+         +      V  + ++ L 
Sbjct: 177 NRAHDYQCYVEGVKKLRKHGIRVCAHIINGLPKEDHKMMMETAREVSKLDVQGIKIHSLH 236

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           + K T   K ++ G +   S    V   NL          H
Sbjct: 237 LLKKTPMVKQYEKGLVEFMSMEEYV---NLVVDQLEVIPPH 274


>gi|144897660|emb|CAM74524.1| Coenzyme B12-binding:Radical SAM [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 439

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 69/238 (28%), Gaps = 20/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C   S    +   + + I   + E  +   Q      + +       PS    
Sbjct: 209 CPYHCEFCA--SGGESWGKLRYHSIDRVIEESWRLKNQFGADYLVFNDDTFTVKPS---- 262

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                 LD   +      ++   + A   ++  N       AG   I+ GV+S   + LR
Sbjct: 263 ----RCLDIAQRLRAEGLDLPFMVTARVDAISENLLAELAAAGCFMITYGVESGSNEVLR 318

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +G+N     A  A+  A+    ++  + ++          +  L  A   A D      
Sbjct: 319 HIGKNTTTDLARKAVRDAQKHGIKVVGNFMFGHYPDDEASCQSTLDLAQELACDVSQFSI 378

Query: 207 LTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                GT  Y+              D      NV      L           AY++  
Sbjct: 379 TVPYPGTQLYRQALAEGRLEIAPFYDNFGYYGNVPWRHPRLDGQWLLDMQQRAYQVMA 436


>gi|154687177|ref|YP_001422338.1| YtqA [Bacillus amyloliquefaciens FZB42]
 gi|154353028|gb|ABS75107.1| YtqA [Bacillus amyloliquefaciens FZB42]
          Length = 322

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     LT+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLLTQFHDIKNRMHEKWKDGKYIAYFQAFTNTHAPVEE 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + + K   +   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 110 LREKFESVLK---LDGVVGMSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  ++  R    R+   +I  LP +         +      V  + ++
Sbjct: 167 LLINRAHDFDCYVEGVNKLRKHGIRVCSHIINGLPLENRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L + KGT   K ++ G L   S+  
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLSQEE 252


>gi|312882603|ref|ZP_07742342.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
          BAA-2122]
 gi|309369688|gb|EFP97201.1| coproporphyrinogen III oxidase [Vibrio caribbenthicus ATCC
          BAA-2122]
          Length = 81

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 4  LSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVR 42
          ++ Y+   T      L +Y+H PFC K C YC  N  V 
Sbjct: 43 VAEYDMACTQYPERPLSLYIHIPFCHKLCYYCGCNKVVT 81


>gi|218281313|ref|ZP_03487801.1| hypothetical protein EUBIFOR_00366 [Eubacterium biforme DSM 3989]
 gi|218217498|gb|EEC91036.1| hypothetical protein EUBIFOR_00366 [Eubacterium biforme DSM 3989]
          Length = 477

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 75/226 (33%), Gaps = 15/226 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC            +   +   L E+Q ++            ++   G    + 
Sbjct: 197 CDKFCTYC---IVPYTRGKQRSRKMSEILKEVQELKDEGYKEITLLGQNVNAYGKD--MD 251

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             Q+ A +L+ +AK             ++P            K    +  I L +QS ++
Sbjct: 252 NEQDFATLLEEVAKIGIPRVRF---TTSHPWDFSEQMIDVIAKYDNIMPFIHLPLQSGDD 308

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +     +A      N  P +  S D+I   P +T  Q+E  L        D
Sbjct: 309 DVLKLMGRRYTKESYLALYDKIINTIPNVAVSTDIIVGFPNETDEQFEHTLDVVRYCKYD 368

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   +  +   GT   +MH   D+    + +A             +
Sbjct: 369 NAFTFIFSARPGTPASRMHDSIDMETKRKRLARLNKTWNDLALEKN 414


>gi|301311892|ref|ZP_07217814.1| radical SAM protein, family [Bacteroides sp. 20_3]
 gi|300829994|gb|EFK60642.1| radical SAM protein, family [Bacteroides sp. 20_3]
          Length = 308

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFSPEYCHTEKSVTEQLEEGVRFFSRKYPDMR-YLAYFQAYTNTY---DRLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           ++    +         + +   P  +     + F    +     I  G++S  +++L  +
Sbjct: 101 LIRKYEEALAYPGVEGLIVGTRPDCMPEGLLDYFAELSQRKFVMIEYGLESTLDKTLVRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E+ +AI             LI  LP ++  +            +  L L+QL 
Sbjct: 161 NRGHTHEESESAIRRTAAKGIYTGAHLILGLPGESRDEILHHADVLSRLPITTLKLHQLQ 220

Query: 209 IEKGTLFYK--MHKDGDLVLPSENVAVDLYNLTQSIT 243
           + K T   K       D  L + +  ++L        
Sbjct: 221 LIKNTRMAKEFKEDPSDFHLYTADEYIELVIDFIERL 257


>gi|296330914|ref|ZP_06873389.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305674432|ref|YP_003866104.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296151919|gb|EFG92793.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412676|gb|ADM37795.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 509

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D + K   +         ++P   +    +   K G  ++ I L VQS
Sbjct: 275 EDMT-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L      
Sbjct: 331 GSSEVLKLMARKYDRERYMELVRKIKAAMPNASLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  + +  +   +   N   +  SA  +  YE
Sbjct: 391 EFDSAYTFIYSPREGTPAAKMKDNVPMRV--KKERLQRLNALVNEISAKKMKEYE 443


>gi|284050979|ref|ZP_06381189.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Arthrospira
           platensis str. Paraca]
          Length = 452

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 16/222 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           ++  E+    +  +++  +V+  + C ++C YC            Q    ++   EM+ +
Sbjct: 132 INIVEDITKPRRDSNITAWVNVIYGCNERCTYC---VVPNVRGTEQSRTPEAIRAEMEEL 188

Query: 63  RQLTGPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            +  G + ++ +      +G   P S  + ++   + D +     +     I     +P 
Sbjct: 189 AR-AGYKEVTLLGQNIDAYGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPR 247

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RM 171
                  +   +         +  QS +   L+ + R +   +    I+  R   P   +
Sbjct: 248 YFTERLIRACAELPKVCEHFHIPFQSGDNDVLKAMARGYTHEKYRRIINTIREYIPDASI 307

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           S D I   P +T  Q+E  L+       D L+    +   GT
Sbjct: 308 SADAIVGFPGETEAQFENTLKLVDDIGFDLLNTAAYSPRPGT 349


>gi|297544398|ref|YP_003676700.1| MiaB-like tRNA modifying protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842173|gb|ADH60689.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 449

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 67/199 (33%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +     ++ +++         +  G    S  +  
Sbjct: 166 CNQYCTYC----IIPYARGPVRS--REPEKILEEVKRFADSGYKEIVLTGIHIASYGKDL 219

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I +   +     I +    P  +     +   K         + +QS  +++
Sbjct: 220 KNIGLLDIIKRIHEIDGIKRIRLSSIEPVFLTEEFVKEIAKLPKMCRHYHVSLQSGCDET 279

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR +   E  + I   R     ++   D++   P +T  ++    +         +
Sbjct: 280 LKRMGRRYTTKEYKSVIDRLRKYIKDVAITTDVMVGFPGETEEEFLETYKFVEEICFSKM 339

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            +++ +  KGT  Y     
Sbjct: 340 HVFKYSRRKGTRAYSFPNQ 358


>gi|119470866|ref|ZP_01613477.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Alteromonadales bacterium TW-7]
 gi|119446093|gb|EAW27372.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Alteromonadales bacterium TW-7]
          Length = 482

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 73/234 (31%), Gaps = 18/234 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   L E+  + +  G R +     ++    G       
Sbjct: 158 CSKYCTFCVVPYTRGEEVSRPVDDVLLEVAQLAEQ-GVREVNLLGQNVNAYRGDT---HD 213

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +I    D I     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 214 GDICYFSDLIRLIAAIDGIDRIRYTTSHPVEFTPDIIDAYADVPELVDHLHLPVQSGSDR 273

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R I P +S   D I   P ++   +E  +        D 
Sbjct: 274 ILNLMKRGHTALEYKSTIRKLRKIRPNLSMSSDFIIGFPGESKADFEATMNLINDIGFDM 333

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +  +   GT    +       +  +     LY L   IT      + ++ +
Sbjct: 334 SFSFIYSARPGTPAADLPD----DVTEQEKKERLYLLQNRITQMAQHISRQMFD 383


>gi|282908902|ref|ZP_06316720.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327166|gb|EFB57461.1| coproporphyrinogen III oxidase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 96

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 304 WLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI---ECER 360
           ++K + K   A++     S  ++ +E + +GLRL EG+S + ++    ++++    +   
Sbjct: 1   YIKAINKESKAILVSNKPSLTERMEEEMFLGLRLNEGVSSRRFKKKFDQSIESVFGQTIN 60

Query: 361 NLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLAV 395
           NL+ +  I   +   +  T RG  + + V     +
Sbjct: 61  NLKEKKLIVE-KNDAIALTNRGKVIGNEVFEAFLI 94


>gi|282895989|ref|ZP_06304020.1| tRNA-i(6)A37 modification enzyme MiaB [Raphidiopsis brookii D9]
 gi|281199099|gb|EFA73969.1| tRNA-i(6)A37 modification enzyme MiaB [Raphidiopsis brookii D9]
          Length = 447

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          V Q    ++   EM+ + Q  G R I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPEAIRGEMEILGQQ-GYREITLLGQNIDAYGRDLPG 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S  E +N+    D +     V     I     +P        +   +         +  Q
Sbjct: 213 STTEGRNLHTFTDLLYYVHDVPGIERIRFATSHPRYFTERLIKACAELPKICEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + + L+ + R +   +    I+  R+  P   +S D I   P +T  Q++  LQ    
Sbjct: 273 SGDNEILKAMSRGYTQEKYRRIINTIRSYMPDASISADAIVGFPGETEIQFQNTLQLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              DHL+    +   GT 
Sbjct: 333 IGFDHLNTAAYSPRPGTP 350


>gi|302874325|ref|YP_003842958.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
           743B]
 gi|307689408|ref|ZP_07631854.1| RNA modification enzyme, MiaB family protein [Clostridium
           cellulovorans 743B]
 gi|302577182|gb|ADL51194.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
           743B]
          Length = 433

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +   +    +  ++  T +  + +L        I  G    S  ++ 
Sbjct: 152 CNRFCSYC----LIPYARGAVCS--KNPETIIDEVNKLADNGFKEIILSGIHIASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +    ++D I +   ++    I I    P        +             L +QS  + 
Sbjct: 206 EERKTLMDIIEEIHKINGIKRIRIGSVEPRFFTDEVIEKMASMEKMCPHFHLSLQSGCDA 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + A E    +   R   P +S   D+I   P +T  ++           V  
Sbjct: 266 TLKRMNRKYTAEEYFNTVVKLRERIPNVSITTDVIVGFPGETAEEFNETFNYLKELRVAK 325

Query: 202 LSLYQLTIEKGTLFYKM 218
           + +++ +  KGT    M
Sbjct: 326 MHIFKYSPRKGTKAADM 342


>gi|320638111|gb|EFX07875.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli O157:H7 str. G5101]
          Length = 474

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R +              Q   Q  G R ++ +      + G    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++  ++  I        +      ++P     +  + YR     V+ + L VQ
Sbjct: 213 GTTGSFADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILNLMGRTHTALEYKALIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              D    +  +   GT    M       +P E     LY L + I     
Sbjct: 328 VNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|222055404|ref|YP_002537766.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221564693|gb|ACM20665.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 554

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S +   K  +    ++ + E+  +R   G   +        T +     
Sbjct: 198 CPAACLFCS--SPLFWGKSLRLRSPRNMVDEITLIRNRCG---LIYFSIRDDTFT----A 248

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +++           +    ++  S+V+       ++AG   I  GV+S   + L+ 
Sbjct: 249 DKGRVMEFCRLLRKEKVFILWNCQSRVSAVDEELLFAMKRAGCECIQFGVESGSPRILKA 308

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+  N  +   A  L R     +S  LI  +  +     +  ++   +       +  L
Sbjct: 309 LGKGINTEQVRKASALVRKAGMNLSIYLITGVKNEVDADTDATIKLVEAIQAHDGQVSPL 368

Query: 208 TIEKGTLFYKM 218
               GT  +  
Sbjct: 369 AYYPGTGIFSK 379


>gi|160933105|ref|ZP_02080494.1| hypothetical protein CLOLEP_01948 [Clostridium leptum DSM 753]
 gi|156868179|gb|EDO61551.1| hypothetical protein CLOLEP_01948 [Clostridium leptum DSM 753]
          Length = 459

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     V  Y  G+E   +     ++  RQL           G    S    L
Sbjct: 179 CDNFCSYC-----VVPYVRGRERS-REPEAVLKEARQLIEGGYKDITLLGQNVNSYGKNL 232

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP N A +L  I+            + ++P             +G     + L  QS  
Sbjct: 233 PEPVNFAKLLKEISDMEGDYWLRF--MTSHPKDCTKELIDVMASSGHIAKHLHLPFQSGN 290

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  I  AR   P +S   D+I   P +T  +++  L        
Sbjct: 291 NRVLKEMNRRYTREQYLEIIRYAREKMPGLSITSDVIVGFPGETYEEFQDTLSLIREVGF 350

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             L  +  +  KGT    M
Sbjct: 351 TALYTFIFSPRKGTPAAGM 369


>gi|21227624|ref|NP_633546.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
 gi|20906012|gb|AAM31218.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
          Length = 374

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT----PSLIEPQ 87
           C YC           G+E   +S  + ++  +     R I+S  F  G+    P      
Sbjct: 156 CKYC-----QTPRLFGREVRHRSIDSILKNAQHYNDLRFIASNAFAYGSDGIHPRF---D 207

Query: 88  NIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSL 145
            +  +L  + K             E  P  V   + +  RK   N  +SLG QS  ++ L
Sbjct: 208 KVEKLLSALHKLPDKKIFFGTFPSEVRPEFVTEESVELVRKYCANDSLSLGAQSGSDRIL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVDHLS 203
           + + R H   ++I+A+          + D I+ LP +T    E  L+    +      + 
Sbjct: 268 KEIRRGHTVEDSISAVECCLEHDIMPAVDFIFGLPTETEEDQEKSLELVRWICEKGGTVR 327

Query: 204 LYQLTIEKGTLFY 216
            + +T   GT + 
Sbjct: 328 AHYMTPLPGTPYA 340


>gi|251780327|ref|ZP_04823247.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084642|gb|EES50532.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 434

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C + C +C    + R     ++         ++ +++L        I  G  T S    L
Sbjct: 152 CNRFCTFC-LIPYARGATCSKKP-----EKVIEEVKKLAEHGFKEVILSGIHTASYGVDL 205

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSL 140
                +  +L+ I K   +      +IE  P+          +  +K       L +QS 
Sbjct: 206 GTDVTLISLLEDIEKIDGIDRVRIGSIE--PAFFTDEVINKIKNMKKL-CPHFHLSLQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            + +L+ + R + A E    +   R+    +S   DLI   P +T  ++    +      
Sbjct: 263 SDATLKRMNRRYTADEYAKTVQTLRDNIQDVSITTDLIVGFPGETEDEFNETYEYLKKLK 322

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           +  + L++ +  KGT   +M    D
Sbjct: 323 LTKVHLFKYSPRKGTKAAEMPNQID 347


>gi|321315467|ref|YP_004207754.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis BSn5]
 gi|320021741|gb|ADV96727.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis BSn5]
          Length = 509

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D + K   +         ++P   +    +   K G  ++ I L VQS
Sbjct: 275 EDMT-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L      
Sbjct: 331 GSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  + +  +   +   N   +  SA  +  YE
Sbjct: 391 EFDSAYTFIYSPREGTPAAKMKDNVPMRV--KKERLQRLNALVNEISAKKMKEYE 443


>gi|197117287|ref|YP_002137714.1| cobalamin-binding radical SAM domain-containing iron-sulfur
           cluster-binding oxidoreductase [Geobacter bemidjiensis
           Bem]
 gi|197086647|gb|ACH37918.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase with TPR domain [Geobacter bemidjiensis
           Bem]
          Length = 564

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 9/188 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S +   +  +    +S + E++ +++  G   +    F   T +     
Sbjct: 196 CPASCLFCS--SPLFWGRGVRFRSPESVVQEIRSLKERYG---LIYFSFRDDTFT----A 246

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +L+          +V    ++  ++V+       ++AG   I  GV+S   Q L+ 
Sbjct: 247 NRGRVLEICRLLRQERLHVMWNCQSRVNAVDEEMLIAMKQAGCECIQFGVESGSPQMLKA 306

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+     E   A    R     +S  LI  +P +        ++   S       +  L
Sbjct: 307 LGKRILPPEVERAAAAVRRAGINLSVYLITGIPGEGEEDLRQTVRLIESIRPHDGQVSPL 366

Query: 208 TIEKGTLF 215
               GT  
Sbjct: 367 VYYPGTEL 374


>gi|260914514|ref|ZP_05920983.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pasteurella dagmatis ATCC
           43325]
 gi|260631615|gb|EEX49797.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pasteurella dagmatis ATCC
           43325]
          Length = 474

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 63/201 (31%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F              +   L E+  + +  G R +     ++    G    
Sbjct: 157 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +     +     +     +P     +    YR     V+ + L VQS 
Sbjct: 211 -HDDGICTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + RNH A E  + I    A     ++S D I   P +T   +E  +       
Sbjct: 270 SDRVLSMMKRNHTALEYKSIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMNLIAQVN 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    M 
Sbjct: 330 FDMSFSFIYSARPGTPAADMP 350


>gi|304320422|ref|YP_003854065.1| hypothetical protein PB2503_04242 [Parvularcula bermudensis
           HTCC2503]
 gi|303299324|gb|ADM08923.1| hypothetical protein PB2503_04242 [Parvularcula bermudensis
           HTCC2503]
          Length = 431

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 83/257 (32%), Gaps = 21/257 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++    G+ ++    +V     C K C +C                  +   E++ +
Sbjct: 117 VEKFDALAEGRQADGYAAFVTIQEGCDKFCTFC---VVPYTRGAEVSRGTDAIAAEVRDL 173

Query: 63  RQLTGPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSS 116
               G   I+ +      + G  P+     ++  +         +     I     +P+ 
Sbjct: 174 AAQ-GVVEITLLGQNVNAWRGAAPAGATQDSLG-LGGLCRHLAQIDGIERIRFTTSHPAD 231

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
           ++      +      +  + L VQS  ++ L+ + R H A   I  I   R   P ++  
Sbjct: 232 MDDELIAAFADEPKLMPYLHLPVQSGADRILKAMNRRHTADTYIRMIERIRQARPDIAIS 291

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D+I   P +    +E  L    +        ++ +   GT    + K       +E++ 
Sbjct: 292 GDMIVGFPGEDEGAFEETLALVEAVEYASCFSFKYSRRPGTPGATLPKQ-----VAEDIK 346

Query: 233 VDLYNLTQSITSAHGLH 249
            +     Q++      H
Sbjct: 347 AERLQRLQALLERQKQH 363


>gi|330507344|ref|YP_004383772.1| radical SAM domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928152|gb|AEB67954.1| radical SAM domain protein [Methanosaeta concilii GP-6]
          Length = 377

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 19/196 (9%)

Query: 32  CPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGTPSLIE 85
           C YC     F   +R   +           ++++          +S+ +G  G  P L  
Sbjct: 154 CTYCQTPRLFGRCMRHRTIPVVARFARRHKDIRFTSP-------NSLAYGSDGRRPRL-- 204

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
            + +  +L+ +++            E  P  V     +   K   N+ ISLG QS     
Sbjct: 205 -EKVKALLEELSEQKKPIYFGTFPSEVRPDFVSDEALEIITKYCANKTISLGGQSGSPAV 263

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVDHL 202
           L+ +GR H   E  +A     +       DLI+ LP ++     M L  A  +      +
Sbjct: 264 LKSIGRGHGRQEIESACEHILDHGLIPLVDLIFGLPMESAEDQHMTLDLARWIEEKGGKV 323

Query: 203 SLYQLTIEKGTLFYKM 218
             ++     GT  ++ 
Sbjct: 324 RAHRFMPLPGTPLWEK 339


>gi|291519114|emb|CBK74335.1| radical SAM protein, TIGR01212 family [Butyrivibrio fibrisolvens
           16/4]
          Length = 299

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 24/223 (10%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF +      V  +        ++    ++        
Sbjct: 29  CPNRDGTISTGGCIFCSEGGSGDFAAEYGDLDVQIKEARARVDAKIS--AKIPANERKYI 86

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
            +F   T +      +  +   + +   +   V ++I   P  +         K    + 
Sbjct: 87  AYFQSFTNTYGNQAQLMKLFSKVLEYPEI---VGLSIGTRPDCLSNEMIDFLSKLNKKKE 143

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E + + + R +       +         ++   +I  LP ++       
Sbjct: 144 VWVELGLQTIHENTAKMINRGYELPVFEDSYKRLTQAGLKVVVHVILGLPGESDEDILET 203

Query: 191 LQRALSYAV--DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           ++           + L  L I KGT    M++     +   + 
Sbjct: 204 VKYLADLKPVLFGIKLQLLHILKGTKLADMYEKNPFHIYELDE 246


>gi|158425333|ref|YP_001526625.1| MiaB-like tRNA modifying enzyme [Azorhizobium caulinodans ORS 571]
 gi|158332222|dbj|BAF89707.1| MiaB-like tRNA modifying enzyme [Azorhizobium caulinodans ORS 571]
          Length = 429

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 77/204 (37%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGG---GT 80
           C  +C +C            +   +   +  ++ + +      + +      +G    G 
Sbjct: 158 CDHRCTFC---IIPYGRGASRSVPMGDVVAHIRALAEGGQKEVVLTGVDLTSYGADLPGA 214

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           P+L   + +  IL  + +   +  +   ++EA     + +  +   +    +  + L +Q
Sbjct: 215 PTL--GRLVRAILRQVPELERLRLSSIDSVEA-----DADLLRALAEEERLMPHLHLSLQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S ++  L+ + R H+ ++ IA +   R + P +    DLI   P +T   +   L    +
Sbjct: 268 SGDDMILKRMKRRHSRAQVIALVEEMRRLRPDLVLGADLIAGFPTETEAMFRNSLSIVDA 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             +  L ++  +   GT   +M  
Sbjct: 328 CGLSFLHVFPFSARAGTPAARMPP 351


>gi|33862596|ref|NP_894156.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Prochlorococcus marinus str. MIT 9313]
 gi|81577894|sp|Q7V8L8|MIAB_PROMM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33634512|emb|CAE20498.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 480

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +++  +V+  + C ++C YC   S   + +      I+  +  +      
Sbjct: 158 LEDLTTARRDSTICAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLEIEGLAAR--- 214

Query: 66  TGPRSISSI-----FFGGGTPSLIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
            G R I+ +      +G   P +    +    + D +     V     I     +P    
Sbjct: 215 -GFREITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHIHDVEGIERIRFATSHPRYFT 273

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
               +             +  QS +   L+ + R +        ++  R + P   +S D
Sbjct: 274 ERLIEACFDLPKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELMPDAAISTD 333

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +I A P +T  Q++  L        D ++    +    T 
Sbjct: 334 VIVAFPGETDAQFQNTLNLLEEVGFDQVNTAAYSPRPNTP 373


>gi|302386432|ref|YP_003822254.1| RNA modification enzyme, MiaB family [Clostridium saccharolyticum
           WM1]
 gi|302197060|gb|ADL04631.1| RNA modification enzyme, MiaB family [Clostridium saccharolyticum
           WM1]
          Length = 482

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +S    ++ ++QL     +  +  G        +L
Sbjct: 200 CNNFCSYC-----IVPYVRGRERS-RSPKDILEEIKQLVNDGVVEIMLLGQNVNSYGKTL 253

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L  I +   +       + ++P  +     +  + +    + + L +QS  
Sbjct: 254 DTPVSFAELLTQIDQVEGLERIRF--MTSHPKDLSDELIKAMKNSKKVCHHLHLPLQSGS 311

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  +   R   P +S   D+I   P +T   +   L+       
Sbjct: 312 SRILKVMNRKYTKEQYLELVEKIRTAIPDISLTTDIIVGFPGETEEDFNETLEVVRKVRF 371

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT   KM
Sbjct: 372 DSAFTFIYSKRTGTPAAKM 390


>gi|312113950|ref|YP_004011546.1| RNA modification enzyme, MiaB family [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219079|gb|ADP70447.1| RNA modification enzyme, MiaB family [Rhodomicrobium vannielii ATCC
           17100]
          Length = 469

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 78/202 (38%), Gaps = 20/202 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K C +C     V  Y  G E + +     ++  ++L   G R I+ +      + G  
Sbjct: 180 CDKFCTFC-----VVPYTRGAE-YSRPVAQIIEEAKRLAERGVREITLLGQNVNAWAGEG 233

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           PS  +   +  +L  +++   ++     T  ++P+ +       +R     +  + L  Q
Sbjct: 234 PSG-KTWTLPDLLAALSEVNGIARLRFTT--SHPNDMSDALIAAHRDLPKLMPYLHLPFQ 290

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H   + +  +H  R+  P   +S D+I   P +T   +E  ++    
Sbjct: 291 SGSDRILKAMNRKHRMEDYLRIVHRLRDARPDLALSTDIIVGFPGETDADFEETMRMVER 350

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
                   ++ +   GT     
Sbjct: 351 VHFAQAYSFKYSPRPGTPAADR 372


>gi|282857132|ref|ZP_06266378.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282585067|gb|EFB90389.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 436

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     V R                       G   +       G       +
Sbjct: 162 CDHRCTYC--IVPVLRGPSVSRPVADILAE--ARRCAAAGQFELILTGVHLGLFGRDSGE 217

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A ++  +     +      ++E  P S+  +  +   ++      + L VQS +++ L
Sbjct: 218 SFAALVRALDSVEGIQRLRFGSLE--PFSIGDDLLEALAQSPRFCRHLHLPVQSGDDEIL 275

Query: 146 RFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           R +GR H A++ +  +     A      +S D++ A P ++ T +E  L    +  V  +
Sbjct: 276 RRMGRGHTAADYLKLVERLRAALGSDLHISTDVMCAFPGESETAFENTLALLKAARVGRV 335

Query: 203 SLYQLTIEKGTLFYKM 218
             +  +   GT    M
Sbjct: 336 HGFHYSPRPGTPAAAM 351


>gi|119944308|ref|YP_941988.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychromonas ingrahamii
           37]
 gi|229890620|sp|A1SSC4|MIAB_PSYIN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|119862912|gb|ABM02389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychromonas ingrahamii
           37]
          Length = 473

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 72/221 (32%), Gaps = 16/221 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN-- 88
           C  YC F              +   L E+  + +  G R ++ +  G    S +      
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVLLEVAQLAEQ-GVREVTLL--GQNVNSYLGATYDG 213

Query: 89  ----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                A +L  +A    +     +T  +NP          Y      VN + L VQ+  +
Sbjct: 214 DTCSFAELLRFVASIDGIDRLRYVT--SNPIDFSDEIIAVYEDTPELVNFLHLPVQAGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H  ++    I     + P   +S D I   P +T   +E  +        D
Sbjct: 272 RILAAMKRGHTVAQYKDQIARLLQVRPELTVSSDFIIGFPNETDHDFEQTMDLIKYINFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
               +  +   GT    M  D  L    + +A+    + Q 
Sbjct: 332 TSYSFIYSQRPGTPAADMPDDVTLETKKQRLAILQDRIQQQ 372


>gi|119896562|ref|YP_931775.1| hypothetical protein azo0271 [Azoarcus sp. BH72]
 gi|119668975|emb|CAL92888.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 528

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 67/244 (27%), Gaps = 23/244 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD   + R YK     ++      ++ +R   G   +  I       +     
Sbjct: 198 CPYTCSFCDRTVYERLYKYNSAQYV---HDHIRHLRDTFG---VHHINIYDDLFT----A 247

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   I +           V+                  ++AG   +S+G++S +   +  
Sbjct: 248 HKKRIHELCELLIAKPLGVDFNCAIRTGHTSDEMLALLKRAGALMVSMGIESADPGMMER 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
                        +        R     I+ LP +T    +      L   +D +++ + 
Sbjct: 308 HKTGVTLEAVKKTVEQIHTAGLRAKGLFIFGLPGETPETLKKTSDFILELDLDEMNMTKF 367

Query: 208 TI-------------EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +              ++G           L    +    +      ++ + H    Y+  
Sbjct: 368 SPMYGAPIWDECVSGKEGDFNEDWRLMNCLNFVFKPNGFESREQMDALYNWHVRRYYDSK 427

Query: 255 NHSF 258
            +  
Sbjct: 428 AYRR 431


>gi|227484928|ref|ZP_03915244.1| radical SAM protein [Anaerococcus lactolyticus ATCC 51172]
 gi|227237083|gb|EEI87098.1| radical SAM protein [Anaerococcus lactolyticus ATCC 51172]
          Length = 316

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 16/208 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C YC   S         ++ +   +       ++      +   + +F   + + +   +
Sbjct: 43  CIYC---SETGGSYENLDSSLSVEEQLSKNRDYITNRYKAKKFIA-YFQNFSNTYMSLND 98

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNR-ISLGVQSLEEQ 143
               +    K       V ++I      +  +  +         G++  I LG+Q+   +
Sbjct: 99  FKSYIKACDK----DYIVGVSIATRSDCITEDKLKFLYDWKNITGIDITIELGLQTANYK 154

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ L R  + ++ I A +L      R+S  +I ALP   +       +   +  V  + 
Sbjct: 155 TLKILNRGESLADFILACNLINKYDFRISTHVILALPWDDINDTIETARILNALNVKEVK 214

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           ++ L I K T   +M+  G +VL ++  
Sbjct: 215 IHSLFIAKNTKLAQMYNTGQIVLKTKEE 242


>gi|269797947|ref|YP_003311847.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
 gi|269094576|gb|ACZ24567.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
          Length = 431

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 78/258 (30%), Gaps = 29/258 (11%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG------GGTPSLIEP 86
           YC F          +   +   + E + +        + + I  G       G P+L   
Sbjct: 157 YCAFCIIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTGIHLGNYGVELPGRPTL--A 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  +L+          ++E         V     +           + L +Q+  +  
Sbjct: 215 DVVKALLEIPNLYRIRFGSIESV------EVSDELVELMATNKRVCPHLHLPLQAGSDHV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++   E    I   R+    +S   D+I   P++T   +E  L         H+
Sbjct: 269 LKLMKRHYTLQEYKDLITSLRSRIKDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHI 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA- 261
             +  +I +GT    M       +    VA+          S  G   Y  S     G  
Sbjct: 329 HAFPYSIREGTPAATMADQVPEAVKKTRVALLN------GLSQSGYERYAKSRIGKPGEI 382

Query: 262 --ESLHNLNYWRYG-DYI 276
             E   N  Y     +YI
Sbjct: 383 LIEKEENGYYMGLTNEYI 400


>gi|19703734|ref|NP_603296.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713866|gb|AAL94595.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 297

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 8/215 (3%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C     + + K      I+   +++   R L   R++  IF   G   ++    
Sbjct: 29  HNRCSFCS----MYKDKKFIIKPIEDIKSDIDAFRALYKNRAVEKIFLADGDALIVPTDI 84

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +LD I + +     V I           V + +   + G++ + LGV+S ++ +L+F
Sbjct: 85  LIQVLDYIKEVFPECKRVSIYGTAIAIHQKSVEDLKKLYEKGLSLVYLGVESGDDDALKF 144

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSL 204
           + +   A + +       +    +S  LI  L               +     +  + S+
Sbjct: 145 IKKGIKAEKIVELSKKIMSTGIDLSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASI 204

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             L + +GT  Y + + G          +    L 
Sbjct: 205 LNLRLYEGTELYNLMQKGKYDYMEGIEVLKEMKLV 239


>gi|94495525|ref|ZP_01302105.1| hypothetical protein SKA58_05735 [Sphingomonas sp. SKA58]
 gi|94424913|gb|EAT09934.1| hypothetical protein SKA58_05735 [Sphingomonas sp. SKA58]
          Length = 441

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 72/203 (35%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---G 79
           C  +C +C     +         V     +      +    +      +    +G    G
Sbjct: 166 CDHRCTFC----IIPYGRGNSRSVPAGAVVDKARELVDAGYREIVLTGVDVTSYGPDLPG 221

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P+L     +  IL G+     +  +   ++E +    +      +    +  + L +Q+
Sbjct: 222 APTL--GLLVERILKGVPDLPRLRLSSIDSVEMDDRLFD---LIAHEPRMMPHVHLSLQA 276

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H+ ++A+  +   +   P +S   D+I   P +    +   L      
Sbjct: 277 GDDMILKRMKRRHSRADAVRIVERLKAARPDISIGADIIAGFPTEDDAMFTRSLALIDDC 336

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
           A+ H  ++  +  +GT   +M +
Sbjct: 337 AIVHGHIFPYSPREGTPAARMPQ 359


>gi|15602866|ref|NP_245938.1| hypothetical protein PM1001 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|18203221|sp|Q9L699|MIAB_PASMU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|7716541|gb|AAF68426.1|AF237940_1 conserved hypothetical protein [Pasteurella multocida]
 gi|12721330|gb|AAK03085.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 474

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 63/201 (31%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F              +   L E+  + +  G R +     ++    G    
Sbjct: 157 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +     +     +     +P     +    YR     V+ + L VQS 
Sbjct: 211 -HDDGICTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + RNH A E  + I    A     ++S D I   P +T   +E  +       
Sbjct: 270 SDRVLSMMKRNHTALEYKSIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMNLIAQVN 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    M 
Sbjct: 330 FDMSFSFIYSARPGTPAADMP 350


>gi|187933658|ref|YP_001885756.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum B str. Eklund 17B]
 gi|187721811|gb|ACD23032.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum B str. Eklund 17B]
          Length = 288

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 99/257 (38%), Gaps = 24/257 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    + + K+     ++    E+ + R +     +  IF   G   +I  
Sbjct: 24  CSHNKCSFCN----MYKSKIFTIKSLEEIKKEIDYFRTIYKY--VEKIFLADGDALIIPI 77

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL  I K         +T+  +P S+    +   +  +K G+  I +G++S +++
Sbjct: 78  GDLKFILKYIKK--VFPECTRVTMYGSPKSILLKSIEELEELKKLGLYMIYMGIESGDDE 135

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +  ++ E I A    +     +S  +I  +    +++       +       D+
Sbjct: 136 VLLDINKGVSSKELIKATKKVKESKILLSVTVIAGIGGKEKSINHAINTGKMISKMEPDY 195

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           L +  L +EKGT  Y    + +  + ++   +D   L             ++SNH  +  
Sbjct: 196 LGVLTLMLEKGTDLYNKMLNKEFNILNDKDILDEIKLLIE--------NIDVSNH--VVF 245

Query: 262 ESLHNLNYWRYGDYIGI 278
              H  NY      + I
Sbjct: 246 RCNHASNYISLKGTLPI 262


>gi|138896073|ref|YP_001126526.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2]
 gi|196248967|ref|ZP_03147667.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16]
 gi|134267586|gb|ABO67781.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2]
 gi|196211843|gb|EDY06602.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16]
          Length = 449

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 80/255 (31%), Gaps = 16/255 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + + +        + +    GG  + ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEIIRQARQLVAAGYKEIVLTGIHTGGYGTDLKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L D   +   +      +IEA+   +        R++   V  + + +QS     
Sbjct: 210 NFAALLRDLDEQVPGLKRIRISSIEAS--QLTDEVIDVLRRSDKIVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTVEFFAERLARLREVFPELAVTSDVIVGFPGETEEEFMETYNFIREQRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA---VDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++  +   GT   +M    D     + V         L +   S       E+      
Sbjct: 328 HVFPYSKRTGTPAARMPDQIDEETKHDRVRRLIALSDQLAKEYASRFEGQVLEVIPEEHD 387

Query: 260 GAESLHNLNYWRYGD 274
             E      Y  Y D
Sbjct: 388 KEEP---GMYIGYTD 399


>gi|16078764|ref|NP_389583.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309576|ref|ZP_03591423.1| hypothetical protein Bsubs1_09356 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313900|ref|ZP_03595705.1| hypothetical protein BsubsN3_09287 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318823|ref|ZP_03600117.1| hypothetical protein BsubsJ_09216 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323095|ref|ZP_03604389.1| hypothetical protein BsubsS_09327 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|6226482|sp|O31778|MIAB_BACSU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|2634073|emb|CAB13574.1| putative conserved AdoMet radical enzyme for tRNA modification
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 509

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D + K   +         ++P   +    +   K G  ++ I L VQS
Sbjct: 275 EDMT-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L      
Sbjct: 331 GSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 391 EFDSAYTFIYSPREGTPAAKMKDNVPMR--VKKERLQRLNALVNEISAKKMKEYE 443


>gi|325661614|ref|ZP_08150238.1| hypothetical protein HMPREF0490_00972 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472141|gb|EGC75355.1| hypothetical protein HMPREF0490_00972 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 491

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ ++ L     +  +  G        +L
Sbjct: 210 CNNFCSYC-----IVPYVRGRERS-RNPEDIIREIQGLVADGVVEVMLLGQNVNSYGKTL 263

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  I K   +       + ++P  +     +  + +      + L VQS  
Sbjct: 264 EHPMTFAQLLTEIEKIEGLERIRF--MTSHPKDLSDELIEVMKHSKKICKHLHLPVQSGS 321

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  +   +   P +S   D+I   P +T   +   +        
Sbjct: 322 TEILKKMNRRYTKEQYLELVRKIKEAVPDISLTTDIIVGFPGETEEDFLETMDVVKKVRY 381

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 382 DSAFTFIYSKRTGTPAAAM 400


>gi|325958322|ref|YP_004289788.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325329754|gb|ADZ08816.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 450

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   S        +    +S + EM+    L     I  + F   T ++   +
Sbjct: 197 CPYQCSFCA--SSAMHGHKLRLRSAKSVVDEME---HLVNEHDIEMVAFMDDTFTI-SKK 250

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I + I +             A   ++  +  +  + AG   + LGV+S ++Q L  
Sbjct: 251 RVYEICEAIKERGL---KNYWGCTARVDTISEDLLKTMKDAGCITMFLGVESADQQVLNE 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  N ++      L R    R    ++  +P  T +     +         +      
Sbjct: 308 VNKKTNIAKIKETFELTRKYDMRTIASVVLGMPGDTKSSIRNTINFVKQLEPSYAVFSLA 367

Query: 208 TIEKGTLFY 216
           T   GT FY
Sbjct: 368 TPYPGTDFY 376


>gi|169335088|ref|ZP_02862281.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257826|gb|EDS71792.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM
           17244]
          Length = 309

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C                I    T++    ++   ++ +S    +F   T +      
Sbjct: 47  CIFCS----KGGSGDFAGKGIDDITTQINNQAEILREKTNASNFIAYFQAYTNTYAPTDY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I      +  +   V ++I   P  ++        +    +   I LG+Q++ E++ 
Sbjct: 103 LRKIYTEALSHPNI---VALSIATRPDCLDKEALDLLEELNNIKPIWIELGLQTINEKTA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            ++ R +  S   +A+   R     +    I  LP +T       +    +  +  + L 
Sbjct: 160 EYIRRGYPLSCFDSAVKELRKRGIEVIVHTILGLPGETRKDILETIHYLNNKDIQGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + K T   K ++     + +    +D         S + +  
Sbjct: 220 LLHVLKDTDLAKEYELNKFEVYTMEEYIDTVIDCVEHLSNNIVIH 264


>gi|53803983|ref|YP_114150.1| hypothetical protein MCA1711 [Methylococcus capsulatus str. Bath]
 gi|53757744|gb|AAU92035.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 436

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 29/204 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-----GTP- 81
           C  +C +C     V R +       +      +   +      ++ +  GG     G P 
Sbjct: 144 CRYRCTFC--IVTVARGEERSRLPAEVIREIRRLQAEGVQEVVLTGVHLGGYGSDLGLPL 201

Query: 82  -----SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
                S+++   I  +  G  + W +        E NP  +               + L 
Sbjct: 202 DALIRSILQETEIPRLRLGSLEPWDLPPGFFDLFE-NPRFM-------------PHLHLP 247

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +QS  +  L+ + R   + E       AR   P ++   D+I   P +T  +WE  LQ  
Sbjct: 248 LQSGSDTVLKRMARRCKSEEFARLADHARRQVPDINITTDIIVGFPGETEREWEESLQFI 307

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
            +     + ++  ++ +GT    M
Sbjct: 308 ETIGFGDIHVFTYSVREGTKAAAM 331


>gi|310643065|ref|YP_003947823.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus polymyxa
           SC2]
 gi|309248015|gb|ADO57582.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Paenibacillus polymyxa
           SC2]
          Length = 447

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +     S +T+ + +        + +    GG    ++  
Sbjct: 154 CNNFCTFC---IIPWSRGLSRSRDAASIITQARQLVHAGYKEIVLTGIHTGGYGDDMDNY 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           +++ +L  + K   +      +IEA+   ++       +++   V    + +Q+ ++  L
Sbjct: 211 DLSDLLWDLEKVEGLERIRISSIEAS--QIDEKMLDVLKRSNKLVRHFHIPLQAGDDTVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    + + R   P ++   D+I   P +T   +    +         + 
Sbjct: 269 KRMRRKYTTEEFYNKMLMIRKAMPDVAITTDIIVGFPGETDEMFRNGYELMKKIGFSEMH 328

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 329 VFPYSKRTGTPAARMEDQVD 348


>gi|196250011|ref|ZP_03148706.1| conserved hypothetical radical SAM protein [Geobacillus sp.
           G11MC16]
 gi|196210525|gb|EDY05289.1| conserved hypothetical radical SAM protein [Geobacillus sp.
           G11MC16]
          Length = 319

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 13/194 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 53  CTFCS----AAGSGDFAGNRADDLVTQFHTIKEKMHQKWKDGKYLAYFQAFTNTHAPVEV 108

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + +     +   V ++I   P  +         +        + LG+Q++ E++ 
Sbjct: 109 LREKYETV---LGLDGVVGLSIATRPDCLPDEVVDYLAELNERTYLWVELGLQTIHERTA 165

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R H+    +  +   R    R+   LI  LP +T        +   +  V  + ++
Sbjct: 166 QLINRAHDFQCFVDGVQKLRRHGIRVCVHLINGLPLETYDMMMETAKTVAAMDVQGIKIH 225

Query: 206 QLTIEKGTLFYKMH 219
            L + KGT   K +
Sbjct: 226 LLHLLKGTPMVKQY 239


>gi|331084790|ref|ZP_08333878.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330410884|gb|EGG90306.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 491

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ ++ L     +  +  G        +L
Sbjct: 210 CNNFCSYC-----IVPYVRGRERS-RNPEDIIREIQGLVADGVVEVMLLGQNVNSYGKTL 263

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  I K   +       + ++P  +     +  + +      + L VQS  
Sbjct: 264 EHPMTFAQLLTEIEKIEGLERIRF--MTSHPKDLSDELIEVMKHSKKICKHLHLPVQSGS 321

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  +   +   P +S   D+I   P +T   +   +        
Sbjct: 322 TEILKKMNRRYTKEQYLELVRKIKEAVPDISLTTDIIVGFPGETEEDFLETMDVVKKVRY 381

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 382 DSAFTFIYSKRTGTPAAAM 400


>gi|323706091|ref|ZP_08117660.1| cobalamin B12-binding domain protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534535|gb|EGB24317.1| cobalamin B12-binding domain protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 558

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 80/237 (33%), Gaps = 26/237 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGP-RSISSIFFGGGTPSLI 84
           C  +C YC            +  +  I+    +++ +  +      +    F        
Sbjct: 180 CPFRCSYC------LSSLDNKLRYASIEKVRDDLEKLTNMGAKIVKLIDRSF-------- 225

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
              NI   ++ +     + S+     E NP  V        +    +RI    G+Q+  +
Sbjct: 226 -DSNIKRAVEILDIIRGLRSDTVFHCEVNPELVNEVFINSLKGIE-DRIQFEVGIQTTNK 283

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++L+ + RN + S A+  I L  N   ++  DLI  LP                   D +
Sbjct: 284 ETLKNVSRNPDVSGALNGIKLIINAGVKVHVDLIAGLPGDDFDSIVKSFNDVYKLNPDEI 343

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            L  L + KGT   K      +   S+     L   T S         YE+ N +FL
Sbjct: 344 QLGFLKLLKGTRIRKNKDIYGIKYKSDPPYEVLMTNTISYMEL-----YELKNIAFL 395


>gi|157804180|ref|YP_001492729.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel]
 gi|229890632|sp|A8F011|MIAB_RICCK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157785443|gb|ABV73944.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel]
          Length = 446

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +   V   +  ++ + ++        R++    +++++    G    + 
Sbjct: 162 CDKFCTFCVVPYTRGVEFSRNVEQVYREALKVVSNGAREIMLLGQNVNAYHGKGVDDKIF 221

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN--NFQGYRKAGVNRISLGVQSLEE 142
              ++   L  I     +         ++P  +  +           +  + L VQS   
Sbjct: 222 SLADLIRYLAQIPNLERLRYTT-----SHPIDMTDDLIKLHSIESKLMPFVHLPVQSGSN 276

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R H+       I+  R   P +  S D I   P +T   +E  L         
Sbjct: 277 KILKAMNRKHDREYYFNIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRKIKYG 336

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ +   GT            + SE + +    L+    + +
Sbjct: 337 QCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQKELSSQQLAFN 382


>gi|94969346|ref|YP_591394.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551396|gb|ABF41320.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 501

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          ++    +  +EM+   +L     +   FF   T ++    
Sbjct: 208 CPAQCTFCLWP-QTLSGHPWRKRSSDAVASEMKRAMELFP--WVREFFFDDDTFNI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A  ++   K   +          +  + +    +  ++AG   + +G +S + Q L+ 
Sbjct: 261 QKARTIELCEKLKPLGMTWSC---TSRVTTDYETLKAMKEAGCRLLIVGYESGDPQILKN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A A       +  ++  D I  LP +T       +  A    V+ + +   
Sbjct: 318 IKKGATVERARAFTKDCHKLGLKVHGDFILGLPGETKETIRRTMDFAKELDVETIQVSIA 377

Query: 208 TIEKGTLFY 216
               GT  Y
Sbjct: 378 HAYPGTELY 386


>gi|45357610|ref|NP_987167.1| radical SAM domain-containing protein [Methanococcus maripaludis
           S2]
 gi|45047170|emb|CAF29603.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 369

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TP 81
           C   C +C     F  ++R          +S  + ++ ++ +   R ++   F  G  T 
Sbjct: 144 CPYNCRFCQTPQIFGKNIRH---------RSIESIVKIVKTMGDIRFVTPNAFSYGSKTG 194

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSL 140
           +  + + +  ++  + +            E  P  V         K   NR I  G QS 
Sbjct: 195 TKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVNFETLDLVNKYCDNRYIHFGAQSG 254

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++ L+ + R H  S+ I A+  ++        D I+  P +T  Q +  +         
Sbjct: 255 SDEVLKHIRRGHLVSDVINAVETSKECDLIPKVDFIFGFPDETDDQRKESIDLMKYIIKK 314

Query: 201 HLSLYQLTIEK--GTLFYK 217
           +  ++        GT F  
Sbjct: 315 NGKVHAHYFMPLCGTYFEN 333


>gi|288556902|ref|YP_003428837.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           pseudofirmus OF4]
 gi|288548062|gb|ADC51945.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           pseudofirmus OF4]
          Length = 541

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 14/213 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     +  +R L           G    +    +
Sbjct: 253 CDKFCTYC-----IVPYTRGKERS-RLPEDIIDEVRDLARQGYKEITLLGQNVNAYGKDL 306

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + ++   +   +     +         ++P   + +      K G  V  I L VQ    
Sbjct: 307 KDRDY-RLGHLMDDIHKIDIPRVRFTTSHPRDFDDHLISVLSKGGNLVEHIHLPVQHGNS 365

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +   + +   H  +   P+ SF  DLI   P +T  Q+E  L        D
Sbjct: 366 DILKLMARKYTREQYVELAHKIKMAIPKASFTTDLIVGFPNETEEQFEDTLSLVREIEFD 425

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
               Y  +  +GT   KM  +  + +  E +A 
Sbjct: 426 SAFTYIYSPREGTPAAKMKDNVPMEVKKERLAR 458


>gi|187932620|ref|YP_001885098.1| hypothetical protein CLL_A0897 [Clostridium botulinum B str. Eklund
           17B]
 gi|187720773|gb|ACD21994.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 434

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C +C    +         E  ++      +   +      I +  +G    + +  
Sbjct: 152 CNRFCTFCLIPYARGATCSKKPEKVLEEVKKLAEHGFKEVILSGIHTASYGVDLGTGVT- 210

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQ 143
             +  +L+ I K   +      +IE  P+          +  +K       L +QS  + 
Sbjct: 211 --LISLLEDIEKIEGIDRVRIGSIE--PAFFTDEVINKIKNMKKL-CPHFHLSLQSGSDA 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + A E    +   R+    +S   DLI   P +T  ++    +      +  
Sbjct: 266 TLKRMNRRYTADEYAKTVQTLRDNIQDVSITTDLIVGFPGETEEEFNETYEYLKKLKLTK 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + L++ +  KGT   +M    D
Sbjct: 326 VHLFKYSPRKGTKAAEMPNQID 347


>gi|327190190|gb|EGE57295.1| putative methylase protein (RNA modification enzyme), MiaB family
           [Rhizobium etli CNPAF512]
          Length = 599

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 85/232 (36%), Gaps = 25/232 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTPSL 83
           C  +C +C            +   + + + + + +            + +  +GG  P  
Sbjct: 323 CDHRCTFC---IIPYGRGNSRSVPMGAVVDQARRLADSGYREIVLTGVDATSYGGDLPGA 379

Query: 84  IEPQNIALILDGI---AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
                +A  L       +   +SS   I  +A+   +     +         + L +Q  
Sbjct: 380 PTLGLLAKTLLKQVPDIRRLRLSSIDSIEADAHLMDLIAEEPRFM-----PHLHLSLQHG 434

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H  ++A+  I  AR++ P MSF  D+I   P +T   ++  ++ A    
Sbjct: 435 DDMILKRMKRRHLRADALRFIEDARSLRPEMSFGADMIAGFPTETEEMFDNAVRLAEEAG 494

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + HL ++  +   GT   +M        P  + ++      +   + H LH 
Sbjct: 495 IAHLHVFPYSPRPGTPAARM--------PQLDRSLVKDRAARLRATGHRLHQ 538


>gi|313893435|ref|ZP_07827007.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313442076|gb|EFR60496.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 431

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 28/252 (11%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG------GGTPSLIEP 86
           YC F          +   I+  + E + +        + + I  G       G P+L   
Sbjct: 157 YCSFCIIPYTRGKLKSRKIEDIVEEAKRLVDHGFHEIVLTGIHLGNYGVELPGRPTL--A 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
             +  +L+          ++E         V     +     K     + L +Q+  +  
Sbjct: 215 DVVKALLEIPELYRIRFGSIESV------EVSDELVELMDTDKRVCPNLHLPLQAGSDHV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++   E    I   R+    +S   D+I   P++T   +E  L         H+
Sbjct: 269 LKLMRRHYTLQEYKDLIAKLRSRIKDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHI 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA- 261
             +  +I +GT    M       +    VA+          S  G  AY  S     G  
Sbjct: 329 HAFPYSIREGTPAATMPDQVPEAVKKTRVALLN------GLSQAGYEAYAKSRIGKPGEI 382

Query: 262 --ESLHNLNYWR 271
             E   N  Y  
Sbjct: 383 LIEKEENGYYMG 394


>gi|317051787|ref|YP_004112903.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
 gi|316946871|gb|ADU66347.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
          Length = 426

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 8/216 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +  R      +  ++  L     +        ++ +  G     L EP 
Sbjct: 147 CDNTCSYC-LVTIARGPSRSIK--MEHVLETAAELAHTFDEIILTGVHIGSYGKDLAEPS 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSLR 146
           ++  +++ + +   +      +IE  P+ ++               + + +QS +++ L 
Sbjct: 204 SLGRLMERLLEIPHLGRLRLSSIE--PAEIDETILGLLSHPKLCRHLHISLQSADDRILA 261

Query: 147 FLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R++  SEA+  +   ++I  F ++  D+I   P ++   +E   QR  S  +D+L +
Sbjct: 262 LMNRHYRWSEALKVMEQVKSIDPFLKIGTDIIAGFPGESPATFESICQRIESSPLDYLHI 321

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +  +   GT    +            V         
Sbjct: 322 FPFSGRPGTQAVDLPDQCPDHEKHARVQRLQAVAAH 357


>gi|229825006|ref|ZP_04451075.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC
           49176]
 gi|229790753|gb|EEP26867.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC
           49176]
          Length = 449

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   R ++   +         + ++       ++ I  G       +
Sbjct: 156 CDQFCTYC----IIPFVRGRIRSRDMEGIVEETDRLVKAGFREMVLTGIHIGSYG---RD 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               + +L+ + +   V  +  I +    P  +     +G  K         L +QS   
Sbjct: 209 IDGESRMLELLTELNKVEGDFRIRLGSVEPRLITEEFLEGLVKLKKVCPHFHLSLQSGST 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R++ A E + ++ L +  + R  ++ D+I   P +T  ++E  +         
Sbjct: 269 TVLKRMNRHYGAEEYLNSVKLLKKYYDRPGITTDIIVGFPGETDEEFEETVAFVKEVGFL 328

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + ++  +   GT   KM
Sbjct: 329 KVHVFPYSKRDGTYAAKM 346


>gi|229891225|sp|A7IGB2|MIAB_XANP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 470

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 24/200 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K C +C                +      M    +L   G R IS I      F G  
Sbjct: 163 CDKFCTFC---VVPYTRGAEVSRPVA---KIMDEAARLVDQGVREISLIGQNVNAFHGAG 216

Query: 81  P--SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           P  +      +A +++ +A+   ++     T  ++P  ++ +    +R     +  + L 
Sbjct: 217 PDGTTWS---LARLMEHMARLDGLARLRYTT--SHPRDMDDDLIAAHRDLPQLMPYLHLP 271

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L  + R H   +  A I   R   P   +S D I   P ++   +E  L   
Sbjct: 272 VQSGSDRILAAMNRKHGRDDFFAIIEKMRQARPDMALSSDFIVGFPGESEKDFEDTLDLV 331

Query: 195 LSYAVDHLSLYQLTIEKGTL 214
                     ++ +   GT 
Sbjct: 332 RRVGFASAYSFKYSPRPGTP 351


>gi|229495400|ref|ZP_04389135.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317843|gb|EEN83741.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas
           endodontalis ATCC 35406]
          Length = 462

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 17/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C YC            +   ++S L E+  M +L         ++++S      TP
Sbjct: 165 CDNYCTYC---IVPYTRGHERSREVESILREIDHMVELGYREVTLLGQNVNSYRREAATP 221

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
               P + A +L  +A+              +P  +         +      +I L VQS
Sbjct: 222 DA-PPFDFADLLQAVAERAPKMRIRF--TSPHPKDMSDKTIAVMARYPNICKQIHLPVQS 278

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R +     +  +   R   P  S   D+      ++   ++  L+     
Sbjct: 279 GSNHILKQMKRGYTREWYLDRVRAIREAMPECSIGTDMFCGFCGESEEDFQETLRLMREV 338

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           A D   +++ +   GT F   H   D+   ++   ++     Q+  S      
Sbjct: 339 AFDSAFMFKYSERPGT-FAAKHLQDDVPEETKIRRLNEMIALQNELSLASNKR 390


>gi|154245754|ref|YP_001416712.1| RNA modification protein [Xanthobacter autotrophicus Py2]
 gi|154159839|gb|ABS67055.1| RNA modification enzyme, MiaB family [Xanthobacter autotrophicus
           Py2]
          Length = 496

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 24/200 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K C +C                +      M    +L   G R IS I      F G  
Sbjct: 189 CDKFCTFC---VVPYTRGAEVSRPVA---KIMDEAARLVDQGVREISLIGQNVNAFHGAG 242

Query: 81  P--SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           P  +      +A +++ +A+   ++     T  ++P  ++ +    +R     +  + L 
Sbjct: 243 PDGTTWS---LARLMEHMARLDGLARLRYTT--SHPRDMDDDLIAAHRDLPQLMPYLHLP 297

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L  + R H   +  A I   R   P   +S D I   P ++   +E  L   
Sbjct: 298 VQSGSDRILAAMNRKHGRDDFFAIIEKMRQARPDMALSSDFIVGFPGESEKDFEDTLDLV 357

Query: 195 LSYAVDHLSLYQLTIEKGTL 214
                     ++ +   GT 
Sbjct: 358 RRVGFASAYSFKYSPRPGTP 377


>gi|125972891|ref|YP_001036801.1| putative radical SAM protein [Clostridium thermocellum ATCC 27405]
 gi|256006012|ref|ZP_05430951.1| conserved hypothetical protein [Clostridium thermocellum DSM 2360]
 gi|281417091|ref|ZP_06248111.1| conserved hypothetical protein [Clostridium thermocellum JW20]
 gi|125713116|gb|ABN51608.1| conserved hypothetical radical SAM protein [Clostridium
           thermocellum ATCC 27405]
 gi|255990035|gb|EEU00178.1| conserved hypothetical protein [Clostridium thermocellum DSM 2360]
 gi|281408493|gb|EFB38751.1| conserved hypothetical protein [Clostridium thermocellum JW20]
 gi|316940870|gb|ADU74904.1| conserved hypothetical protein [Clostridium thermocellum DSM 1313]
          Length = 313

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 66/176 (37%), Gaps = 12/176 (6%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GV 130
           +F   T + +  ++    ++   +   V+    + I   P  V  +     ++     GV
Sbjct: 83  YFQNYTNTYLPLEDFKRHINDALEENIVA----VYISTRPDCVRDSYLSFLKEIKLSKGV 138

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  I LG+Q++   +L+ L R H  +E I A+   +          I  +P  +M     
Sbjct: 139 DIVIELGLQTVNYHTLKLLNRGHLLAEFIDAVLAIKRYGLESCAHYILDIPMDSMDDVIE 198

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             +   +  V+ +  + L I K T+  +M+K G++   +            S    
Sbjct: 199 GARILSALGVNQVKCHSLYILKDTVLGEMYKRGEIKHVTLEE---YIERAISFLEY 251


>gi|163847968|ref|YP_001636012.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222525848|ref|YP_002570319.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chloroflexus
           sp. Y-400-fl]
 gi|229890474|sp|A9WHB1|MIAB_CHLAA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|163669257|gb|ABY35623.1| RNA modification enzyme, MiaB family [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449727|gb|ACM53993.1| RNA modification enzyme, MiaB family [Chloroflexus sp. Y-400-fl]
          Length = 466

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 23  VHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----- 74
           VH P    C   C YC       R    +   +   + E++ +    G + I+ +     
Sbjct: 158 VHVPIQYGCNMTCSYC---VIPLRRGRERSRPLAEIVEEVRRIVAR-GAKEITLLGQIVD 213

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            +G   P       +A +L+ +     +       + ++P+ +     +   +       
Sbjct: 214 SWGHDLP---GRPELADLLEAVDPTPGLLRLRF--LTSHPAWMTDRLIETVARLPRCQPE 268

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I+L VQ+  ++ L+ + R +  +     I   R   P +S   D+I   P +T   +   
Sbjct: 269 INLPVQAGSDRVLKLMRRGYTVARYKTLIARIRAAIPDISLTTDIIVGHPGETEDDFRQT 328

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +        D + +   +   GT   +  +D  L +P          L Q
Sbjct: 329 MDLCAEIGFDKVHIAAFSARPGTRAAEQEQDPALAVPPAVKEERRRRLEQ 378


>gi|253701958|ref|YP_003023147.1| radical SAM protein [Geobacter sp. M21]
 gi|251776808|gb|ACT19389.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 564

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 13/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S +   +  +    +S + E++ +++  G   +    F   T +    +
Sbjct: 196 CPASCLFCS--SPLFWGRGVRFRSPESVVHEIRSLKERYG---LIYFSFRDDTFTANRGR 250

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              I  +L     +      V    ++  ++V+       ++AG   I  GV+S   Q L
Sbjct: 251 VLQICRLLREERLH------VMWNCQSRVNAVDEEMLIAMKQAGCECIQFGVESGSPQML 304

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + LG+     E   A    R     +S  LI  +P +        ++   S       + 
Sbjct: 305 KALGKRILPPEVERAAAAVRRAGINLSVYLITGIPGEGEEDLRQTVRLIESIRPHDGQVS 364

Query: 206 QLTIEKGTLF 215
            L    GT  
Sbjct: 365 PLVYYPGTEL 374


>gi|163852140|ref|YP_001640183.1| MiaB-like tRNA modifying enzyme [Methylobacterium extorquens PA1]
 gi|163663745|gb|ABY31112.1| MiaB-like tRNA modifying enzyme [Methylobacterium extorquens PA1]
          Length = 410

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V     +      ++          +    +G    S + 
Sbjct: 139 CDHRCTFCVIPFG-RGNSRSVPLAEAVAQVRRIVEHGGCEVVLTGVDLTAYGRDLDSELS 197

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +   IL  +     +  +   ++EA     +      + +    +  + L +Q+ ++
Sbjct: 198 LGRLVRTILAEVPDLVRLRLSSIDSVEA-----DAELIAAFAEEPRLMPHVHLSLQAGDD 252

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H+ ++AI      R++        DLI   P +T  Q+   L       + 
Sbjct: 253 LILKRMKRRHSRADAIRLCETLRDLRPGLVFGADLIAGFPTETEAQFARSLDLVAECGLT 312

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           HL ++  +    T   +M 
Sbjct: 313 HLHVFPYSPRPDTPAARMP 331


>gi|224582505|ref|YP_002636303.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224467032|gb|ACN44862.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 488

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 73/230 (31%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------LTGPRSISSIFFGGGTP 81
           C K C YC       R +              Q   Q      L G    +         
Sbjct: 171 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGT 228

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + I     A +L  +A    +      T  ++P     +  + YR     V+ + L VQS
Sbjct: 229 TGI----FADLLRLVAAIDGIDRIRFTT--SHPIEFTDDIIEVYRDTPELVSFLHLPVQS 282

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++     
Sbjct: 283 GSDRVLNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTDDFEKTMKLIADV 342

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             D    +  +   GT    M       +P E     LY L + I     
Sbjct: 343 NFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 388


>gi|307154937|ref|YP_003890321.1| RNA modification enzyme, MiaB family [Cyanothece sp. PCC 7822]
 gi|306985165|gb|ADN17046.1| RNA modification enzyme, MiaB family [Cyanothece sp. PCC 7822]
          Length = 446

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    Q+   EM+ + +  G + I+ +      +G   P 
Sbjct: 157 CNERCSYC---VVPNVRGVEQSRTPQAIRAEMEELGRQ-GYKEITLLGQNIDAYGRDLPG 212

Query: 83  L-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +++  + D +     V     I     +P           ++         +  Q
Sbjct: 213 VTATGRHLHTLTDLLYYVNDVPGIERIRFATSHPRYFTERLIVACKELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + Q L+ + R +   +    I   R++ P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNQILKAMKRGYTQEKYRQIIEKIRSLMPDASISADAIVGFPGETEEQFENTLKLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|315634739|ref|ZP_07890023.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aggregatibacter segnis
           ATCC 33393]
 gi|315476687|gb|EFU67435.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aggregatibacter segnis
           ATCC 33393]
          Length = 474

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P+  
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPVDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGPTF- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +     +     +     +P     +    YR     V+ + L VQS  
Sbjct: 212 -DGEICTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   + + P +  S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRGHTALEYKSIIRKLKAVRPNIQISSDFIVGFPGETNEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 331 DMSFSFIYSARPGTP 345


>gi|282850176|ref|ZP_06259555.1| MiaB-like protein [Veillonella parvula ATCC 17745]
 gi|294791828|ref|ZP_06756976.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
 gi|294793689|ref|ZP_06758826.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
 gi|282579669|gb|EFB85073.1| MiaB-like protein [Veillonella parvula ATCC 17745]
 gi|294455259|gb|EFG23631.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
 gi|294457058|gb|EFG25420.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
          Length = 431

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 78/258 (30%), Gaps = 29/258 (11%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG------GGTPSLIEP 86
           YC F          +   +   + E + +        + + I  G       G P+L   
Sbjct: 157 YCAFCIIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTGIHLGNYGVELPGRPTL--A 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  +L+          ++E         V     +           + L +Q+  +  
Sbjct: 215 DVVKALLEIPNLYRIRFGSIESV------EVSDELVELMATNKRVCPHLHLPLQAGSDHV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++   E    I   R+    +S   D+I   P++T   +E  L         H+
Sbjct: 269 LKLMKRHYTLQEYKDLITSLRSRIKDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHI 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA- 261
             +  +I +GT    M       +    VA+          S  G   Y  S     G  
Sbjct: 329 HAFPYSIREGTPAATMADQVPEAVKKTRVALLN------GLSQSGYERYAKSRIGKPGEI 382

Query: 262 --ESLHNLNYWRYG-DYI 276
             E   N  Y     +YI
Sbjct: 383 LIEKEENGYYMGLTNEYI 400


>gi|237752873|ref|ZP_04583353.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375140|gb|EEO25231.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 443

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C +KC +C   S   +         ++  + ++ ++ L         F    + S +   
Sbjct: 152 CNQKCSFCAIPSFKGKLHS------RTLESTLKEVQALVKQGFRDFSFISQDSSSYMRDL 205

Query: 87  ---QNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQS 139
                +  ++ GI K     +       +   PS+      Q     K  VN   + +Q 
Sbjct: 206 GVKDGLVALIKGIDKLVENGLDLRSARILYLYPSTTSKELIQAICDSKVFVNYFDMPLQH 265

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                L+ +GR+H+  + +  +    N F R S   I   P ++ + +E        +  
Sbjct: 266 ASPSVLKTMGRSHHFKDLLKEMRKTPNSFVRTS--FIIGHPGESESDFEELCAFIEEFPF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D ++L+  + E+GT   +M +   
Sbjct: 324 DRMNLFAFSKEEGTKSAEMEQIPQ 347


>gi|193084232|gb|ACF09895.1| MiaB-like tRNA modifying enzyme [uncultured marine crenarchaeote
           AD1000-23-H12]
          Length = 422

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 36/221 (16%)

Query: 23  VHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           VH       C+ KC +C     V+  + G  ++           R L   R I      G
Sbjct: 137 VHIAEVSQGCLSKCTFC----QVKFARGGLVSY-----------RPLDIVREIEQAVIDG 181

Query: 79  GTPSLIEPQNI--------ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG 129
                +  Q+I          + + +     +  +  + +   NP  ++         + 
Sbjct: 182 CREIWLTSQDIGCYGKDIKTSLPELLNIICDIDGDFMVRVGMMNPMHLD-EIIDDLITSY 240

Query: 130 VN-----RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQ 182
           ++      + + VQS  ++ L+ + R H+ ++    +   RN FP +S   D+I   P +
Sbjct: 241 MDPKIFKFLHIPVQSGSDEILKLMKRMHSVNDFELTVKKFRNAFPNISLSTDIIVGFPDE 300

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           T  Q++  L        D +++ +     GT  Y       
Sbjct: 301 TDLQFQETLDLVRRINFDTVNISRFGSRPGTEAYSKPILPH 341


>gi|308174722|ref|YP_003921427.1| Fe-S oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|307607586|emb|CBI43957.1| putative Fe-S oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|328554652|gb|AEB25144.1| Fe-S oxidoreductase [Bacillus amyloliquefaciens TA208]
 gi|328913061|gb|AEB64657.1| putative Fe-S oxidoreductase [Bacillus amyloliquefaciens LL3]
          Length = 322

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLITQFHDIKNRMHEKWKDGKYIAYFQAFTNTHAPVEE 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + + K   +   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 110 LREKFESVLK---LDGVVGMSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  ++  R    R+   +I  LP +         +      V  + ++
Sbjct: 167 LLINRAHDFDCYVEGVNKLRKHGIRVCSHIINGLPLENRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L + KGT   K ++ G L   S+  
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLSQEE 252


>gi|90421992|ref|YP_530362.1| tRNA-i(6)A37 modification enzyme MiaB [Rhodopseudomonas palustris
           BisB18]
 gi|123395291|sp|Q21C43|MIAB_RHOPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|90104006|gb|ABD86043.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopseudomonas
           palustris BisB18]
          Length = 473

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + +++ +    G R I+    ++    G    
Sbjct: 166 CDKFCTFC---VVPYTRGAEVSRPVDKIVEDVRRLAD-NGVREITLIGQNVNAYHGDGPD 221

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  +L  +AK   +      T  ++P  V+ +    +R     +  + L VQS  
Sbjct: 222 GRPWPLGALLHHLAKIPGIVRLRYST--SHPRDVDQSLIDAHRDLPALMPFVHLPVQSGS 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  + R H+A +    +   R+  P +  S D I   P +T   +   L        
Sbjct: 280 DAILAAMNRKHSADDYRRLVDRFRSANPAIAFSSDFIVGFPGETDEDFAATLALVTQIGY 339

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
                ++ +   GT   ++ 
Sbjct: 340 AGAYSFKYSPRPGTPAAELQ 359


>gi|332877554|ref|ZP_08445301.1| radical SAM protein family [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684660|gb|EGJ57510.1| radical SAM protein family [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 313

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 72/220 (32%), Gaps = 13/220 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   ++   +      ++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFNPAYCRTEKTITEQLEEGKRFFGRKYPDMKF-LAYFQAYTNTY---GEVDE 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLGVQSLEEQSLR 146
           ++    +   V   V I I   P  +           G+NR     +  G++S+++ +L 
Sbjct: 101 VIRKYEEALVVPDVVGIVIGTRPDCMPQALLDYL--TGLNRRTFLMVEYGIESVDDGTLV 158

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R H  +E    +    +   R    +I  LP +   +   +        +  L ++Q
Sbjct: 159 RINRGHTFAETAETVRRTADAGIRTGGHIILGLPGEKRDELVGQAALVSRLPLTALKIHQ 218

Query: 207 LTIEKGTLFYKMH--KDGDLVLPSENVAVDLYNLTQSITS 244
           L + +GT     +        L + +  ++L         
Sbjct: 219 LQLIRGTRMAHEYALHPEQFHLYTADEYIELVIDYIERLR 258


>gi|172037723|ref|YP_001804224.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cyanothece sp.
           ATCC 51142]
 gi|229890507|sp|B1WU96|MIAB_CYAA5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|171699177|gb|ACB52158.1| tRNA-i(6)A37 modification enzyme MiaB [Cyanothece sp. ATCC 51142]
          Length = 448

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    ++   EM+ + +  G + ++ +      +G   P 
Sbjct: 159 CNERCSYC---VVPNVRGVEQSRTPEAIYAEMELLGKQ-GYKEVTLLGQNIDAYGRDLPG 214

Query: 83  LIE-PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           + E  ++   + D + +   +S    +     +P        +   +         +  Q
Sbjct: 215 VTETGRHQHTLTDLLYQVHDISGIERLRFATSHPRYFTERLIKACHELPKVCEHFHIPFQ 274

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R   P   +S D I   P +T  Q+E  L+    
Sbjct: 275 SGDNDVLKAMKRGYTHEKYRHIIDKIREYMPDASISADAIVGFPGETEAQFENTLKLVDD 334

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 335 IGFDQLNTAAYSPRPGTP 352


>gi|160892513|ref|ZP_02073303.1| hypothetical protein CLOL250_00042 [Clostridium sp. L2-50]
 gi|156865554|gb|EDO58985.1| hypothetical protein CLOL250_00042 [Clostridium sp. L2-50]
          Length = 292

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 15/208 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   S        + +       +++  +QL   +     +    
Sbjct: 29  CPNRDGTAGIGGCIFCS--SLGSGDFSPKADM--DIDQQIEQAKQLVASKFKGKHYIAYF 84

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
                   +I  + D        S    I+I   P  +        R     +   + LG
Sbjct: 85  QSFTNTYGDIDRLRDIYRNAAMRSDIAVISIATRPDCLGNQVIDMLRDIQRIKPVWVELG 144

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ E++ + + R +  S    A+    ++   +   +I  LP +T        +    
Sbjct: 145 LQTIHEETAKLINRGYPLSVYDEAVKKLCDLGVHVIVHMILGLPGETQRDMIETAEYIGK 204

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                + L  L + KGT   +++++G+ 
Sbjct: 205 SGAQGIKLQLLHVLKGTNLAELYQNGEC 232


>gi|301155952|emb|CBW15422.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
           parainfluenzae T3T1]
          Length = 461

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R I+ +         P+  
Sbjct: 144 CNKYCTYC---VVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREINLLGQNVNAYRGPTF- 198

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 199 -DGGICTFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVDFVHLPVQAGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T  ++E  +        
Sbjct: 258 DRILTMMKRGHTALEYKSIIRKLRAVRPNIQISSDFIVGFPGETKEEFEQTMNLIAQVNF 317

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 318 DMSFSFIYSARPGTPAADMP 337


>gi|251793083|ref|YP_003007809.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Aggregatibacter aphrophilus NJ8700]
 gi|247534476|gb|ACS97722.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aggregatibacter
           aphrophilus NJ8700]
          Length = 474

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPVDDILFEIAQLAEQ-GVREVNLLGQNVNAYRGPTF- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +     +     +     +P     +    YR     V+ + L VQS  
Sbjct: 212 -DGEICTFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   + + P +  S D I   P +T   +E  +        
Sbjct: 271 DRILTMMKRGHTAIEYKSIIRKLKAVRPNIQISSDFIVGFPGETEEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 331 DMSFSFIYSARPGTP 345


>gi|237737261|ref|ZP_04567742.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421123|gb|EEO36170.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 304

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 79/240 (32%), Gaps = 27/240 (11%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF     +      N I+  L  ++  ++      I+ 
Sbjct: 31  CPNRDGTLSKRGCIFCSERGSGDF---AGKRGDDIYNQIEEQLKLIE--KKFPEGEVIA- 84

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---V 130
            +F   T +  + + +  I      +  V     + I   P  +  +  +   +      
Sbjct: 85  -YFQNFTNTYADVEYLREIYTKALSHPRVMG---LAIATRPDCLGEDVLELLDELNKKHF 140

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E+  + + R +     + A         +    +I  LP +        
Sbjct: 141 LWVELGLQTINEEVAKRINRQYPLETYVKATEELNKRDIKFVTHIIVGLPYEKEDDALET 200

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +       + ++ L + K T+  ++++  ++ L  ++  V       +  S + +  
Sbjct: 201 AMFSEKCGTWGVKIHLLHVLKNTMLEELYQKDEIKLQKKSEYVKKIVKILANLSYNIVIH 260


>gi|331083857|ref|ZP_08332966.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330403282|gb|EGG82842.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 446

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 76/224 (33%), Gaps = 19/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K+C YC     + + +    N+    + ++    +    + +  +       ++    
Sbjct: 155 CDKRCTYC----IIPKLRG---NYRSIPMEQLISQAEYLAGQGVRELILVAQETTVYGKD 207

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  + K   +       +   P  +     Q  ++     + + L +Q  
Sbjct: 208 IYGKKCLHKLLKELCKIPGIQWIR--ILYCYPEEIYPELIQTMKEEKKICHYLDLPIQHC 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ +GR     E I  + L R   P +     LI   P +T    E  ++   +  
Sbjct: 266 SDKILKKMGRRTTKQELIDIVTLLRKEIPDIILRTTLITGFPGETEEDHEELMEFIDTME 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            D L ++  + E+ T    M          ++   +L  L Q I
Sbjct: 326 FDRLGVFTYSAEEDTPAANMPNQI-AEEVKQDRQAELMELQQEI 368


>gi|307353536|ref|YP_003894587.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156769|gb|ADN36149.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
          Length = 490

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 10/216 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  N H    K G     +S    ++ +  L     I ++        ++  +
Sbjct: 227 CPFNCNYC--NIHALYGKPGIR--FRSPEKVIEEIDFLVKKYQIENLKIIDELF-VLNEK 281

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  + D I        N+ I   A   ++  +     + AG+N ++ G++S  +     
Sbjct: 282 RVKKLCDLI---IDREYNLNIWAYARVDTINESLANKMKSAGINWLAFGIESASKDVRDG 338

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  + ++   AI +A+     +  + I+ LP       +  L  A    +++++ Y  
Sbjct: 339 VTKRFDQNKIEKAIEIAQKAGIFIMGNFIFGLPDDNNQTMQETLDLAKELNLEYINFYTA 398

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               G+  Y       + LP  +         +   
Sbjct: 399 MAYPGSKLYFEAIQNGIKLP--DKWHGFAQYGEETL 432


>gi|71279192|ref|YP_269140.1| radical SAM domain/B12 binding domain-containing protein [Colwellia
           psychrerythraea 34H]
 gi|71144932|gb|AAZ25405.1| radical SAM domain/B12 binding domain protein [Colwellia
           psychrerythraea 34H]
          Length = 551

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 114/328 (34%), Gaps = 32/328 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   S + +     E  + +FL +M+ + Q  G R+   I         +   
Sbjct: 221 CPFKCEFC--LSSLDKSSTPFE--LTAFLEQMEILYQR-GARNFKFID----RTFNLNIN 271

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQS 144
               I+       T   ++ +  E  P  +     +        G  +  +G+Q+   + 
Sbjct: 272 TTMQIMQFFLDRMT--EDLYLHFEVVPDHL-PRKLKELLAQFPEGSLQFEIGIQTFNVEV 328

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              + R  N +++   +   R+     +  DLI+ LP +T   ++    +        + 
Sbjct: 329 QANISRKQNNAKSKENLLWLRDNTSAHIHADLIFGLPGETFDTFKDSFNQLYHCRPHEIQ 388

Query: 204 LYQLTIEKGTLFYKMHKDGDL---VLPSENVAVDLYNLTQSITSAHGLHAYE--ISNHSF 258
           +  L   KG+   +  +  DL    LP  N+         ++   +    Y   I N   
Sbjct: 389 MGILKRLKGSPIIRHTESFDLRFNPLPPFNILSTDRVSFSTMQRINRFARYWDMIGNSGR 448

Query: 259 LGAESLHNLNYWRYGDYIGIGPGAHS--RVKVGSHRVAISIEKHPESWLKMVR----KNG 312
                 H L+   + D++     A +            IS++K  E   + V     +  
Sbjct: 449 FKYALPHMLSDEPFDDFM-----AITEWIFNKTGQIHKISLKKLFELISQSVEALFPEKH 503

Query: 313 HAVVEKEFLSSEQQADEFLMMGLRLREG 340
           H V+EK  L  E    + L  GL+L  G
Sbjct: 504 HLVIEKIELDYEATKLKSLFNGLKLYAG 531


>gi|254446032|ref|ZP_05059508.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium
           DG1235]
 gi|198260340|gb|EDY84648.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium
           DG1235]
          Length = 427

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 92/259 (35%), Gaps = 34/259 (13%)

Query: 23  VH----WPFCVKK--------CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +H     PF  ++        C + C F          +   + + L E +   +     
Sbjct: 119 IHNFGDIPF-NQRANLKIQDGCSFVCSFCIIPFARGAARAREMGNLLEEARQKAEQGIRE 177

Query: 70  SISS-IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--- 125
            + + +  G       +   +  +L+G+     +      +IE  P+++    F      
Sbjct: 178 IVITGVNIGTYDT---KGGGLLKVLEGLNAVEGIDRIRISSIE--PTTIPTELFGLMNDP 232

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQT 183
           + A +    + +QS  ++ L+ + R ++  E +  +HLA +      +  D++   P +T
Sbjct: 233 QHALLPFFHIPLQSGCDKVLKEMRRRYSVGEYLEFLHLAHDNVPGLYVGSDIMVGFPGET 292

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              ++   +  L    D   ++  +  KGT+  +     ++               + ++
Sbjct: 293 EEDFQETCRVFLDNPFDFCHVFSYSERKGTVAARREDQVEIP-----ERARRSAYLRRLS 347

Query: 244 SAHGLHAYEISNHSFLGAE 262
           +      YE    S+LG E
Sbjct: 348 AKKRYDFYE----SYLGKE 362


>gi|170747073|ref|YP_001753333.1| RNA modification protein [Methylobacterium radiotolerans JCM 2831]
 gi|229890617|sp|B1LWE8|MIAB_METRJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|170653595|gb|ACB22650.1| RNA modification enzyme, MiaB family [Methylobacterium
           radiotolerans JCM 2831]
          Length = 445

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              + + L E + +    G R I+    ++    G    
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRSVAAVLAEAEKLAD-GGVREITLIGQNVNAYHGDGPD 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +A ++  +AK   ++     T  ++P+  +    + + +    +  + L VQS  
Sbjct: 213 GAPAGLADLVRAVAKIPGIARIRYTT--SHPNDFDDALIRAHAEVPALMPYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H        I   R   P +  S D I   P +T   +   L+       
Sbjct: 271 DRILAAMNRKHTGDAYRRLIDRIRAARPDIALSSDFIVGFPGETDADFAETLRLVRDVGF 330

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           +    ++ +   GT     
Sbjct: 331 ESAFSFKYSTRPGTPAADR 349


>gi|167749053|ref|ZP_02421180.1| hypothetical protein ANACAC_03834 [Anaerostipes caccae DSM 14662]
 gi|167651675|gb|EDR95804.1| hypothetical protein ANACAC_03834 [Anaerostipes caccae DSM 14662]
          Length = 306

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 75/225 (33%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C   S         +  +   +     ++ +RQ T        +F   T +    + 
Sbjct: 46  CIFC---SEGGSGDFAPDAVLPIGEQIEEGIRMIRQKTDASK-YIAYFQAFTNTYAPYEK 101

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +             V + +   P  +  +  +   +    +   + LG+Q++ E++ 
Sbjct: 102 LHSLF---YDAILRKEIVGLAVGTRPDCLPPDVLKLLDELNQIKPVFVELGLQTIHEKTA 158

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +F+ R +  S    A+    ++   +   LI  LP +T       ++      V+ +   
Sbjct: 159 QFIRRGYPLSCFEQAVKALHDLGINVVVHLILGLPGETEEMMLQSVRYLNQLPVNGVKFS 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + K T    ++++    +   +  VDL            +  
Sbjct: 219 LLHVLKHTDLGMLYEENPFPVYDLDDYVDLVIRCMEELREDIVIH 263


>gi|159475142|ref|XP_001695682.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158275693|gb|EDP01469.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 435

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 26/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPS 82
           C+  C YC    H R +    +    +    ++        R I      +  +G    S
Sbjct: 152 CLGACTYCK-TKHARGHLGSYDP--AALAERVRQAAADPWVREIWLSSEDTGAYGRDIGS 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG-----VNRISLG 136
            +       +LD +           + +   NP  V + + +   KA       + + + 
Sbjct: 209 SLP-----ELLDKLIAVLPPDGRTLLRVGMTNPPYV-LEHLEALCKALRHPCVFSYLHVP 262

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQS  +  L  + R +  +E    I   LA      ++ D+I A P ++       L+  
Sbjct: 263 VQSASDAVLEAMKREYTVAEFRRVIDTLLAGVPGMELATDIITAFPGESPEDHAATLELL 322

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +Y   H  + Q     GT   +M       +P++        L   + S   ++ 
Sbjct: 323 RTYRFPHTHISQFYPRPGTPAARM----KNKIPTQVSKQRSRELAAEVDSWADVYQ 374


>gi|189347592|ref|YP_001944121.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
 gi|189341739|gb|ACD91142.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
          Length = 502

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 92/238 (38%), Gaps = 11/238 (4%)

Query: 32  CPY-CDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQ 87
           CPY CDF N         +       +TE++ +R +    S+  +   F     S ++ +
Sbjct: 175 CPYQCDFCNVTTLFGHKIRTKTTTQIITELERLRGMGWRDSVFFVDDNFIAHK-SYLKKE 233

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++    ++  +S+        N +  +        +AG N++ +G+++ ++ +L+ 
Sbjct: 234 LLPELIAW-RESNGISTKFYTECSINLAD-DAELMDLMARAGFNQVFIGIETPDDNALQA 291

Query: 148 LGRNHNASE-AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            G+ HN S   +  I   +N    +    I      T + ++ +++      +    +  
Sbjct: 292 CGKQHNRSRNMLENIRRIQNAGMEVQGGFIVGFDSDTPSIFQKQIEFIQKSGIVTAMVGV 351

Query: 207 LTIEKGTLFYKMHKDGDLVLPSE--NVAVDLYNLTQSITSAHGLHAY-EISNHSFLGA 261
           L    GT  Y+  K    +L +   + A    N+  ++        Y E+ NH +   
Sbjct: 352 LQALPGTKLYERMKSEGRLLHNSSGDNADSNTNIIPAMDPEMLKKGYREMMNHLYAPK 409


>gi|313903997|ref|ZP_07837377.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6]
 gi|313471146|gb|EFR66468.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6]
          Length = 487

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ + QL     I  +  G        +L
Sbjct: 205 CNNFCSYC-----IVPYVRGREKSREPL-DILREIEQLVADGVIEVMLLGQNVNSYGKTL 258

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSL 140
             P + A +L+ +A+   +       + ++P  +         K        + L +QS 
Sbjct: 259 ENPVSFAELLESVAQIDGLRRVRF--MTSHPKDLSDELIAVMAKYPDKICPHLHLPLQSG 316

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     +  +   R   P +S   D+I   P +T   ++  L+      
Sbjct: 317 SSRLLKHMNRRYTKESYLELVDKIRAAMPDISLTTDIIVGYPGETEEDFQETLEVVEKVR 376

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D    +  +   GT   KM
Sbjct: 377 YDSAFTFIYSKRSGTPAAKM 396


>gi|313892531|ref|ZP_07826118.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dialister microaerophilus
           UPII 345-E]
 gi|313118928|gb|EFR42133.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dialister microaerophilus
           UPII 345-E]
          Length = 447

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 13/217 (5%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +T    +++  +V     C K C YC     +  Y  G+E   +     ++ ++QL  
Sbjct: 144 SELTASRKSNIFAWVPIMQGCNKFCTYC-----IVPYVRGRETS-RPISDVLKEVKQLAK 197

Query: 68  PRSISSIFFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGY 125
                    G    S  ++ +N     D I    TV     I  + ++P  +        
Sbjct: 198 DGYKEITLLGQNVNSYGLDFRNGTDFSDLIRALDTVDGIERIRYMTSHPRDMTFEMVDAI 257

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
            ++   V ++ L VQ    + L+ + R +            +   P +    DLI   P 
Sbjct: 258 AESPKVVTQMHLPVQHGSNEMLKKMNRGYTIEHYFELFDYVKKKIPDVVVTTDLITGFPG 317

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +T    +  L+       D    +  +  KGT   +M
Sbjct: 318 ETEEMHKETLEILKRARFDSAYTFIYSPRKGTPAARM 354


>gi|302877837|ref|YP_003846401.1| RNA modification enzyme, MiaB family [Gallionella capsiferriformans
           ES-2]
 gi|302580626|gb|ADL54637.1| RNA modification enzyme, MiaB family [Gallionella capsiferriformans
           ES-2]
          Length = 443

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 10/201 (4%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSI--SSIFFGGGTPSLIEPQ 87
           C  YC F              +   + +++    Q     ++   ++    G     +  
Sbjct: 156 CSKYCTFCVVPYTRGEEVSRPLSDVMKDIEELTAQGVKEVTLIGQNVNAYAGLTEDDDTV 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A ++  IA    ++     T  ++P  +       Y      V+ + L VQS  ++ L
Sbjct: 216 DFAYLIQAIAALPEIARIRYST--SHPRDMSQRLIDVYATTPKLVSHLHLPVQSGSDRVL 273

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R H   E  + I   R + P +    D I   P +T   +E  L+       D+  
Sbjct: 274 AAMKRGHTVLEYKSVIRRVRALRPDLCVTSDFIVGFPGETEADFEATLKLIEDIGFDNSF 333

Query: 204 LYQLTIEKGTLFYKMHKDGDL 224
            Y  +   GT   +MH D  L
Sbjct: 334 SYLYSPRPGTPAAEMHDDTPL 354


>gi|67922391|ref|ZP_00515902.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Crocosphaera watsonii WH 8501]
 gi|67855735|gb|EAM50983.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Crocosphaera watsonii WH 8501]
          Length = 452

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C +KC YC          V Q    ++   EM+ + +  G + ++ +      +G   P 
Sbjct: 157 CNEKCSYC---VVPSVRGVEQSRTPEAIYAEMELLAKQ-GYKEVTLLGQNIDAYGRDLPG 212

Query: 83  L-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    ++   + D + +   +     +     +P        +   +         +  Q
Sbjct: 213 VTASGRHKHTLTDLLYQVHDIPGIERLRFATSHPRYFTERLIKACDELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R   P   +S D I   P++T  Q+E  L+    
Sbjct: 273 SGDNDVLKAMKRGYTHQKYRKIIDKIREYMPDASISADAIVGFPEETEEQFENTLKLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|282856140|ref|ZP_06265423.1| radical SAM protein, family [Pyramidobacter piscolens W5455]
 gi|282585899|gb|EFB91184.1| radical SAM protein, family [Pyramidobacter piscolens W5455]
          Length = 298

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 69/210 (32%), Gaps = 25/210 (11%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFI------QSFLTEMQWMRQLTGPRSISSI 74
           C  +       C +CD          G   FI      +     +    +  G RSI  +
Sbjct: 30  CPHRRGLRDGGCIFCD------ERGGGSGAFIQGVSLREQVRKGIAGAWKHYGTRSII-L 82

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTV--SSNVEITIEANPSSVEV---NNFQGYRKAG 129
           +F   + + +  +  A  L       +   ++   I++   P  +     N  +   +  
Sbjct: 83  YFQSYSATNLPLERFASALQEARDAASAWGANVRAISVSTRPDLLPEPVLNYLEELAERC 142

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LGVQ+ + Q LR+L R H       A+        R+   LI  +P +   Q   
Sbjct: 143 QIWLELGVQTTDPQGLRWLRRGHGLDSVEQALARLSKTRLRVCAHLIAGIPGEREDQLAR 202

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
                       L  + L + +GT    ++
Sbjct: 203 SALWLAERGAHALKFHPLYVLRGTPLETLY 232


>gi|260587855|ref|ZP_05853768.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
 gi|260542120|gb|EEX22689.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
          Length = 446

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 76/224 (33%), Gaps = 19/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K+C YC     + + +    N+    + ++    +    + +  +       ++    
Sbjct: 155 CDKRCTYC----IIPKLRG---NYRSIPMEQLISQAEYLAGQGVRELILVAQETTVYGKD 207

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  + K   +       +   P  +     Q  ++     + + L +Q  
Sbjct: 208 IYGKKCLHKLLKELCKIPGIQWIR--ILYCYPEEIYPELIQTMKEEKKICHYLDLPIQHC 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ +GR     E I  + L R   P +     LI   P +T    E  ++   +  
Sbjct: 266 SDKILKKMGRRTTKQELIDIVTLLRKEIPDIILRTTLITGFPGETEEDHEELMEFIDTME 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            D L ++  + E+ T    M          ++   +L  L Q I
Sbjct: 326 FDRLGVFTYSAEEDTPAANMPNQI-AEEVKQDRQAELMELQQEI 368


>gi|20089140|ref|NP_615215.1| hypothetical protein MA0242 [Methanosarcina acetivorans C2A]
 gi|19914008|gb|AAM03695.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 373

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 16/197 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT----PSLIEPQ 87
           C YC           G+E   +S  + ++  R     R I+S  F  G+    P      
Sbjct: 155 CRYC-----QTPRLFGREVRHRSIDSVLKNARYYDDLRFIASNAFAYGSDGIHPRF---D 206

Query: 88  NIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSL 145
            +  +L  + +             E  P  V   + +  RK   N  +SLG QS  ++ L
Sbjct: 207 KVEKLLSALHELPDKKIFFGTFPSEVRPEFVTEESVELVRKYCANDSLSLGAQSGSDRVL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVDHLS 203
           + + R H   ++I+A+          + D I+ LP +T    E  L+    +      + 
Sbjct: 267 KEIRRGHTVEDSISAVECCLEHEIAPAVDFIFGLPTETEEDQEKSLELVRWICKKGGTVR 326

Query: 204 LYQLTIEKGTLFYKMHK 220
            + +T   GT +     
Sbjct: 327 AHYMTPLPGTPYASAVP 343


>gi|309972847|gb|ADO96048.1| 2-methylthioadenine synthetase (MiaB) [Haemophilus influenzae
           R2846]
          Length = 474

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  +    G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTNDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +        
Sbjct: 271 DRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|291549892|emb|CBL26154.1| MiaB-like tRNA modifying enzyme [Ruminococcus torques L2-14]
          Length = 450

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 71/202 (35%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +  Y  G+    +S    +  +R L        +  G    S  I+ 
Sbjct: 173 CNQFCTYC-----IIPYARGRVRS-RSMEDVLDEVRTLADNGYKEVVLTGIHLSSYGIDF 226

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +L+ I     +     I +    P  +     +G  K         L +QS  + 
Sbjct: 227 DKEYHLLELIRAVHEIDGIERIRLGSLEPGIITEEFAEGIAKLPKMCPHFHLSLQSGCDA 286

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + +SE      L R  FP   ++ D+I   P +T  +++       S     
Sbjct: 287 TLKRMNRRYTSSEYAEKCELLRKYFPNPALTTDVIVGFPGETEEEFKESYDFVDSIDFYE 346

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
             +++ +  +GT    M    D
Sbjct: 347 THIFKYSRREGTKAAVMPDQVD 368


>gi|209965481|ref|YP_002298396.1| hypothetical protein RC1_2196 [Rhodospirillum centenum SW]
 gi|209958947|gb|ACI99583.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 458

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPS 82
           C  +C +C   F        V     +    T ++   +      +    +G    GTP+
Sbjct: 184 CDHRCTFCIIPFG-RGNSRSVPMGEVVAQVRTLLESGYREVVLTGVDITSYGADLPGTPA 242

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLGVQ 138
           L   Q +  +L  + +   +  +    +E +        E           +  + L +Q
Sbjct: 243 L--GQMVRRLLAAVPELPRLRLSSLDAVEMDDDLWRLVAEEERL-------MPHLHLSLQ 293

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           + ++  L+ + R H   +AI     AR + P + F  D+I   P +T   +E  L+    
Sbjct: 294 AGDDMVLKRMKRRHTRDDAIRFCEKARGLRPDIVFGADIIAGFPTETDAMFENSLRIVEE 353

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             +  L ++  +   GT   KM +
Sbjct: 354 CGLTWLHVFPYSARPGTPAAKMPQ 377


>gi|157828452|ref|YP_001494694.1| hypothetical protein A1G_03275 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933167|ref|YP_001649956.1| tRNA 2-methylthioadenosine synthase-like protein [Rickettsia
           rickettsii str. Iowa]
 gi|157800933|gb|ABV76186.1| hypothetical protein A1G_03275 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908254|gb|ABY72550.1| tRNA 2-methylthioadenosine synthase-like protein [Rickettsia
           rickettsii str. Iowa]
          Length = 421

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 148 CDHFCTFC-----IIPYGRGKSRSVA--IGAIAEQVKHLVLNGFKEVVFTGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + 
Sbjct: 201 LPGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 LQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 316 SEAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAAILRQEGQNQLTEFFKKHI 370


>gi|291436867|ref|ZP_06576257.1| RNA modification enzyme [Streptomyces ghanaensis ATCC 14672]
 gi|291339762|gb|EFE66718.1| RNA modification enzyme [Streptomyces ghanaensis ATCC 14672]
          Length = 505

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGRIDGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPLQSGSDAVLKAMRRSYRQERYLGIIEKVRAAIPHAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 318 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 359


>gi|239928542|ref|ZP_04685495.1| hypothetical protein SghaA1_09973 [Streptomyces ghanaensis ATCC
           14672]
          Length = 496

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 133 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEIEA 190

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 191 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGRIDGLERVRF--TSPHPRDFTDD 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 249 VIAAMAETPNVMPQLHMPLQSGSDAVLKAMRRSYRQERYLGIIEKVRAAIPHAAISTDII 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 309 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 350


>gi|120601403|ref|YP_965803.1| magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Desulfovibrio vulgaris DP4]
 gi|120561632|gb|ABM27376.1| Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Desulfovibrio vulgaris DP4]
          Length = 485

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV +C +C       +    +   I S + E+  + +      I          SL   +
Sbjct: 215 CVNRCTFC----VAHKNIGIRVRPIDSVIGEVDLLLREYDAGYIFFCD------SLFTSR 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I++           +    EA+ ++++ ++ +     G   ++ G++S  ++ L  
Sbjct: 265 K-KRIIELSDALRHHFPGLRWGCEAHVNTIDEDSVRAMAAGGCVDMNFGIESGVDRLLTA 323

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + +    ++   AI + + +  R++     I  LP +     +  +  A S  +D     
Sbjct: 324 VNKRQTTAQIADAIRMVKRV-SRINAIGLFILGLPGERPEDSDATIDFACSLPLDMAQFS 382

Query: 206 QLTIEKGTLFYKM 218
            LT   G+  ++ 
Sbjct: 383 ILTPYPGSPIFEQ 395


>gi|27904873|ref|NP_777999.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|46397184|sp|Q89AC2|MIAB_BUCBP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|27904271|gb|AAO27104.1| hypothetical protein bbp_392 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 445

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 18/208 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E+  +    G + I  +      + G T +
Sbjct: 158 CNKFCSFC---IVPYTRGHEISRPVDDILLEISTLSSR-GVKEIHLLGQNVNSYKGKTFN 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                +I    + +    ++     I     NP     +  + Y +    V+ + L VQS
Sbjct: 214 ----GDICKFSNLLRLVASIDGIDRIRFTTSNPFEFTDDIIEIYAEIPKIVSFLHLPVQS 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R H   E    I+    + P   +S D I   P +T+  +E  LQ     
Sbjct: 270 GSNRILQLMKRMHTIDEYKTIINKILKLRPNIQISSDFIIGFPGETLIDFEQTLQLIKDL 329

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            +D    +  +   GT   ++  +  L 
Sbjct: 330 NIDMSYSFIYSPRPGTPASELQDNVTLC 357


>gi|225175716|ref|ZP_03729709.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168640|gb|EEG77441.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
          Length = 289

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 81/223 (36%), Gaps = 14/223 (6%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C     + + K  +   ++    +++  ++  G   +  +F   G    +E 
Sbjct: 25  CSHNACSFCS----MYKGKKFRVRSLEEMAEDIRMAKERYGY--VEKVFLADGDALAMET 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  +L  + +        +I++ A P ++        +  R+AGV+    G++S +E+
Sbjct: 79  DHLLELLQLVRE--GFPKARQISVYAGPKNILAKSEEELRSIREAGVSLAYFGLESGDEE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDH 201
            L+ + +     E   A    +     +S  +I  L  +           + A      +
Sbjct: 137 VLKEVKKGATPEEMAKAGKKIQLAGIDLSVTVILGLGGRHRWREHALQTAKVASEINPRY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           L+   L ++K T   K    G+  +PS   ++           
Sbjct: 197 LAALTLMVDKRTPLGKKVASGEFAVPSAAESLLELKTLIENLE 239


>gi|223944159|gb|ACN26163.1| unknown [Zea mays]
          Length = 517

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 20/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ +    T +    +     S  +  +G    +   
Sbjct: 89  CLGACTYCK-TKHARGHLGSYTIDSLVDRVKTVVSEGVREIWLSSEDTGAYGRDIGT--- 144

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGVQSL 140
             N+  +L+ I     V  +  + I        + + +            + + + VQS 
Sbjct: 145 --NLPNLLNAIVAELPVDQSTMLRIGMTNPPFILEHLKEIAAVLCHPCVYSFLHVPVQSG 202

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R +   E    +     +    +++ D+I   P +T   +   +     Y 
Sbjct: 203 SDSVLKAMNREYTVGEFRKVVDTLCELVPGMQIATDIICGFPGETDEDFSETVNLVKEYQ 262

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              + + Q     GT   +M       +PS  V      LT    S       E
Sbjct: 263 FPQVHISQFYPRPGTPAARM-----KKVPSNEVKKRSRELTSVFESFSPYQGME 311


>gi|194693708|gb|ACF80938.1| unknown [Zea mays]
          Length = 626

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 20/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ +    T +    +     S  +  +G    +   
Sbjct: 198 CLGACTYCK-TKHARGHLGSYTIDSLVDRVKTVVSEGVREIWLSSEDTGAYGRDIGT--- 253

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGVQSL 140
             N+  +L+ I     V  +  + I        + + +            + + + VQS 
Sbjct: 254 --NLPNLLNAIVAELPVDQSTMLRIGMTNPPFILEHLKEIAAVLCHPCVYSFLHVPVQSG 311

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R +   E    +     +    +++ D+I   P +T   +   +     Y 
Sbjct: 312 SDSVLKAMNREYTVGEFRKVVDTLCELVPGMQIATDIICGFPGETDEDFSETVNLVKEYQ 371

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              + + Q     GT   +M       +PS  V      LT    S       E
Sbjct: 372 FPQVHISQFYPRPGTPAARM-----KKVPSNEVKKRSRELTSVFESFSPYQGME 420


>gi|209551318|ref|YP_002283235.1| MiaB-like tRNA modifying enzyme [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537074|gb|ACI57009.1| MiaB-like tRNA modifying enzyme [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 424

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 87/234 (37%), Gaps = 29/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGG---GT 80
           C  +C +C            +   + + + + + +            + +  +GG   G 
Sbjct: 147 CDHRCTFC---IIPYGRGNSRSVPMGAVVDQARKLADSGYREIVLTGVDATSYGGDLPGA 203

Query: 81  PSL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           P+L  +    +  + D       +SS   I  +A+   +  +  +         + L +Q
Sbjct: 204 PTLGLLAKTLLKQLPDISR--LRLSSIDSIEADAHLMDLIADEPRFM-----PHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H+ ++A+  I   R + P MSF  D+I   P +T   +   ++ A  
Sbjct: 257 HGDDMILKRMKRRHSRADALRFIEDVRRLRPEMSFGADMIAGFPTETEEMFGNAVRLAEE 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             + HL ++  +   GT   +M        P  + ++      +   + H LH 
Sbjct: 317 AGIAHLHVFPYSPRPGTPAARM--------PQLDRSLVKDRAARLRATGHRLHQ 362


>gi|77163772|ref|YP_342297.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrosococcus oceani ATCC
           19707]
 gi|254435338|ref|ZP_05048845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani
           AFC27]
 gi|123757951|sp|Q3JEH9|MIAB_NITOC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|76882086|gb|ABA56767.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani ATCC
           19707]
 gi|207088449|gb|EDZ65721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani
           AFC27]
          Length = 447

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 20/220 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGGTPS 82
           C  YC F                  + E+  + +        L    +      G G   
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPFDDVIAEIVGLAEQGVREITLLGQNVNAYRGSIGEGDT- 215

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                ++AL++  +A    +      T  ++P     +  Q + +    V+ + L VQS 
Sbjct: 216 ----ADLALLIHYVASIEGIERIRFTT--SHPVEFSDSLIQAFAEVPALVSHLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H   E  A +   R + P +S   D I  LP +T   ++  L       
Sbjct: 270 SDRMLSLMKRGHTVLEYKAKLRKLRQVRPDISISSDFIVGLPGETEADFQATLALVDEVG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            DH   +  +   GT    +     + L  E +A+    L
Sbjct: 330 FDHSFSFIYSPRPGTPAASLPDCTPIALKKERLAILQGRL 369


>gi|326796263|ref|YP_004314083.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Marinomonas mediterranea MMB-1]
 gi|326547027|gb|ADZ92247.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Marinomonas mediterranea MMB-1]
          Length = 450

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 75/220 (34%), Gaps = 10/220 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +     +        Q   Q      +   ++    G     +
Sbjct: 156 CSKYCTFC--VVPYTRGEEVSRPYEDVLKEVAQLSEQGVREIHLLGQNVNAYRGETQDGD 213

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A I+  IA+   V      T  ++P     +  + +R     V+ + L VQS    
Sbjct: 214 EADLADIIHAIARIEGVERIRFTT--SHPVEFTDSLIEAFRTEPKLVSHLHLPVQSGANN 271

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H+    I  I+  ++  P +S   D I   P +T   +   +        DH
Sbjct: 272 VLSAMKRGHDRQYYIDKINRIKDARPGISLSSDFIIGFPGETDDDFIDTMNLIQEIGFDH 331

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              +  +   GT    +  D    L  E +A+    ++Q 
Sbjct: 332 SFSFVYSQRPGTPASDLEDDTPEELKKERLAILQRRISQQ 371


>gi|146296852|ref|YP_001180623.1| RNA modification protein [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410428|gb|ABP67432.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 434

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC                + S L E+Q +        + + I          + 
Sbjct: 152 CEQFCSYC---IIPYARGSVVSRSLSSILDEVQRLASNGYKEFVITGINISAYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  ++ +  +   K     + + L +QS  ++
Sbjct: 206 DYKVTLVDVIEEISKIEKVRRIRLSSLEPIVMKEDFIKRLVKIEKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++   E    + + R  +  ++F  D+I   P ++   +E  ++         
Sbjct: 266 ILKLMNRHYTTDEYRQIVEMVRGYWNDVAFTTDIIVGFPGESDEDFERTVEFVKEIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
           + +++ + +KGT  Y M   
Sbjct: 326 IHVFRFSPKKGTNAYNMPYQ 345


>gi|302338031|ref|YP_003803237.1| MiaB-like tRNA modifying enzyme [Spirochaeta smaragdinae DSM 11293]
 gi|301635216|gb|ADK80643.1| MiaB-like tRNA modifying enzyme [Spirochaeta smaragdinae DSM 11293]
          Length = 453

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R ++ +   +    +E+              I   G   +  +  
Sbjct: 171 CDNACTYC-------RVRLARGPSVSLASSEVLRRAAALADEGFGEIVLTGVNLTAWQEG 223

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGVQSLEEQSL 145
           ++    D +A   + S    I + +               +   R    L VQS  +  L
Sbjct: 224 DL-RFADLLALMTSDSRAYRIRLSSTEPDAIDEKLASAASSPRVRPHFHLPVQSGSDTVL 282

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +GR++ A + + A+ L R       ++ D+I  LP ++   +E  L         H+ 
Sbjct: 283 ASVGRHYTADDVLRAVALLRKAKEDPFLAADIIVGLPGESDADFEATLSLVERCGFAHIH 342

Query: 204 LYQLTIEKGTLFY 216
            +  +   GT  Y
Sbjct: 343 AFPFSPRPGTPLY 355


>gi|253701976|ref|YP_003023165.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. M21]
 gi|251776826|gb|ACT19407.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. M21]
          Length = 473

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 18/195 (9%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C YC     F+    R +  Q  +      E++W+++      +  I F   T + 
Sbjct: 206 CPSRCIYCLWPQTFSGRTLRKRSPQNVY-----EEVRWIKENLP--QVKEISFDDDTFTA 258

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              +  A  +    K   VS  +         + +    +  R AG++ + +G ++  E+
Sbjct: 259 --DREHAKAIARAIKPLNVSWVINARA-----NCDYETLKELRDAGMHHVVVGYETGNEE 311

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L+ + +    ++AI        +   +    +  LP +T    +  +  A+   +  + 
Sbjct: 312 ILKNIKKGVTKAQAIEFTRNCHKLGLTIHGAFVLGLPGETRETIKETIAYAIDLNLTSIQ 371

Query: 204 LYQLTIEKGTLFYKM 218
           +   +   GT FY M
Sbjct: 372 VSLASPYPGTEFYDM 386


>gi|229890670|sp|Q2RZF8|MIAB_SALRD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 503

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 31/260 (11%)

Query: 15  GSNSLGVYVHWP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG----- 67
            SN +  YV      C   C +C            +   + + L+E+  + +        
Sbjct: 184 DSNGVSAYVSI-MRGCDNMCTFC---VVPFTRGREESRPVTTILSEVARLAEEGYKEVTL 239

Query: 68  -PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
             ++++S  +     + +    +      + +   VS  + +     +P     +  + +
Sbjct: 240 LGQNVNSYHYTDADGTSVSFAEL------VDRVSRVSPEMRVRYSTSHPKDCTDDLLKVH 293

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
           R      N I L VQ    + L  + R +   E +A    A+ + P +S   DLI     
Sbjct: 294 RDRPNVCNYIHLPVQHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCG 353

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T  Q E  L        DH  +++ +    T   + ++D                  + 
Sbjct: 354 ETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAARKYEDDVP-------EDTKQRRLEE 406

Query: 242 ITSAHGLHAYEISNHSFLGA 261
           I      HA E SN + +G 
Sbjct: 407 IIELQNQHAKE-SNEAEVGR 425


>gi|24216693|ref|NP_714174.1| Fe-S oxidoreductase-like protein [Leptospira interrogans serovar
           Lai str. 56601]
 gi|24198038|gb|AAN51192.1| Fe-S oxidoreductase-like protein [Leptospira interrogans serovar
           Lai str. 56601]
          Length = 565

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 60/166 (36%), Gaps = 8/166 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    H       + N ++  L+E++   +L          F     +   P+
Sbjct: 239 CPHRCSFCS--VHTTFGTKYRRNTVERVLSEIKKSYELGY----RVFDFEDDNLTFFRPE 292

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  + + +   +       + +      S++    +  ++AG   ++L + S ++    
Sbjct: 293 -MKQLCEELIDAFPKKDVRFVAMNGISYISLDPELLRLMKEAGFTNLNLALVSSDKLVRE 351

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
              R H   + I  +     +  +++   I  LP +T+      LQ
Sbjct: 352 TTKRPHTVEKYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQ 397


>gi|194014848|ref|ZP_03053465.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacillus pumilus ATCC
           7061]
 gi|194013874|gb|EDW23439.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacillus pumilus ATCC
           7061]
          Length = 508

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC            +       + E++ +             ++   G     +
Sbjct: 220 CDKFCTYC---IVPYTRGKERSRRPDEIIQEVRRLAAEGYKEITLLGQNVNAYGKDFEDM 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E   +  ++D + K   +         ++P   + +  +   K G  ++ I L VQS   
Sbjct: 277 E-YGLGHLMDELRK---IDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSS 332

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L        D
Sbjct: 333 SVLKLMARKYDRERYLDLVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFD 392

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 393 AAYTFIYSPREGTPAAKMQDNVPMH--VKKERLQRLNALVNEISAKKMKEYE 442


>gi|91202730|emb|CAJ72369.1| similar to protein involved in methylthiolation of isopentenylated
           A37 derivatives in tRNA [Candidatus Kuenenia
           stuttgartiensis]
          Length = 496

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 12/211 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   + +   KV   + I + + E++++ +  G        F   + ++    
Sbjct: 224 CPFNCSYCA--TQIWTRKVRYRS-IPNIIEEIKYVNERYGT---HQFTFKDDSFTV---- 273

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +       V   V+         V++   +  +KAG N I +GV+S  E+ L+ 
Sbjct: 274 SKKRVAEFCDALLKVGLKVKWDCNTRADLVDLPLLKTMKKAGCNSIKVGVESGSERILKI 333

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   +  L R      +   +  +P +T    +  ++          S+   
Sbjct: 334 MDKGVSLEQVKESAKLFRKAGIHWTAYFMMGVPTETKEDVKETVKLLYEIKPSFASVGVY 393

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
               GT  +      +  L   ++A + Y L
Sbjct: 394 EPFPGTKLFD--IGVERGLVKRDMAYEEYFL 422


>gi|46581422|ref|YP_012230.1| radical SAM/B12 binding domain-containing protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46450844|gb|AAS97490.1| radical SAM/B12 binding domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235079|gb|ADP87933.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 485

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV +C +C       +    +   I S + E+  + +      I          SL   +
Sbjct: 215 CVNRCTFC----VAHKNIGIRVRPIDSVIGEVDLLLREYDAGYIFFCD------SLFTSR 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I++           +    EA+ ++++ ++ +     G   ++ G++S  ++ L  
Sbjct: 265 K-KRIIELSDALRHHFPGLRWGCEAHVNTIDEDSVRAMAAGGCVDMNFGIESGVDRLLTA 323

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + +    ++   AI + + +  R++     I  LP +     +  +  A S  +D     
Sbjct: 324 VNKRQTTAQIADAIRMVKRV-SRINAIGLFILGLPGERPEDSDATIDFACSLPLDMAQFS 382

Query: 206 QLTIEKGTLFYKM 218
            LT   G+  ++ 
Sbjct: 383 ILTPYPGSPIFEQ 395


>gi|15605821|ref|NP_213198.1| hypothetical protein aq_284 [Aquifex aeolicus VF5]
 gi|6226354|sp|O66638|MIAB_AQUAE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|2982992|gb|AAC06605.1| hypothetical protein aq_284 [Aquifex aeolicus VF5]
          Length = 440

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 20/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C YC     V R +  + +  ++  + +  +++L     +  I   G   +     
Sbjct: 158 CDKNCTYC----VVPRTRGKERS--RALHSILDEVKRLVDD-GVREIHLLGQNVTAWGKD 210

Query: 86  ---PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P   + +L  ++K   V      T   +P  +  +  +         N + L  Q+ 
Sbjct: 211 FEKPIPFSELLYQVSKIDGVERIRFTT--GHPRDLTDDIIEAMADIPQVCNALHLPFQAG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +   E +  I   +     +  S D+I   P +T   +E  L       
Sbjct: 269 SNRILALMDRGYTKEEYLEKIEKLKEKVKDIAMSTDVIVGFPTETEEDFEHTLDVLKKVR 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            + +  ++ +   GT   +M                L  L +SI S      YE
Sbjct: 329 FEQVFSFKFSPRPGTPAAEMEGQIPDD-VKTERMRRLLELQKSILSEIAKK-YE 380


>gi|148262586|ref|YP_001229292.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146396086|gb|ABQ24719.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 471

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 73/242 (30%), Gaps = 17/242 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C+ N     ++  +   +Q+ + E++   +  G   I        T +     
Sbjct: 208 CPFNCAFCNHN-----HQKYRTRSVQNVVDEIEMNLKQFG---IRDFDIYDSTFT----A 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++    +       V  T+ +    +  +     + AG + I  G++S   + L+ 
Sbjct: 256 DRKRVIAICEEIHRRKLKVGFTVRSRVDVITRDMIDSLKAAGCHTIMYGIESSNPEILKR 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +       +  +        +     ++  P +     E  +  AL   +D+     L
Sbjct: 316 MNKGITPELVMEKVQYTHQSGIKALGFFLFGFPGENRETIEDTINFALKLPLDYALFSIL 375

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDL-----YNLTQSITSAHGLHAYEISNHSFLGAE 262
             +  T  Y+ +             +D           +  +      Y ++ +      
Sbjct: 376 LPQPETEIYEYYWKRGFGDYWAEYTLDESKDELIEFIDTGVTRAEASEYAVTAYRRFFFR 435

Query: 263 SL 264
             
Sbjct: 436 PR 437


>gi|302338928|ref|YP_003804134.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Spirochaeta smaragdinae
           DSM 11293]
 gi|301636113|gb|ADK81540.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Spirochaeta smaragdinae
           DSM 11293]
          Length = 440

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    +VR  ++ +    +    E++ + +    + +  I   G   +     
Sbjct: 156 CNNFCSYC-IVPYVRGREISRSP--EDIFREIERLEE----KGVREITLLGQNVNSYNWN 208

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +     D +AK  +++ ++     + ++P  +     +   +     N I L VQ     
Sbjct: 209 DTLRFPDLLAKIASMTDSIRWIRFMSSHPKDIPQELIRVIAEHETVCNHIHLPVQHGSNS 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R +        + + R++     +S DL+   P ++   +E+ L        D 
Sbjct: 269 VLRRMNRKYTREHYFDLVEMMRSVIPGLSLSTDLMIGFPGESEEDFELTLDLVRQVGFDD 328

Query: 202 LSLYQLTIEKGTLFYKM 218
              Y     +GT  Y M
Sbjct: 329 AFTYYYNPREGTAAYDM 345


>gi|291484256|dbj|BAI85331.1| hypothetical protein BSNT_02749 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 509

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 88/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D + K   +         ++P   +    +   K G  ++ I L VQS
Sbjct: 275 EDMT-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDRLIEVLAKGGNLLDHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L      
Sbjct: 331 GSSEVLKLMARKYDRERYMELVRKIKTAMPNASLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  + +  +   +   N   +  SA  +  YE
Sbjct: 391 EFDSAYTFIYSPREGTPAAKMKDNVPMRV--KKERLQRLNALVNEISAKKMKEYE 443


>gi|251777615|ref|ZP_04820535.1| radical SAM protein, family [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243081930|gb|EES47820.1| radical SAM protein, family [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 312

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 75/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +        C +C   +       G  N+ I +    ++ M            +F  
Sbjct: 36  CPNRDGKVSKGGCVFCS--ARGSGDYAGSRNYSITNQFNNVKTMMANKWKSGKYIAYFQA 93

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAGVNRISL 135
            T +      +    +       V   V ++I   P  +E       +   K     + L
Sbjct: 94  YTNTYAPVDELRQKYEEAINQEGV---VALSIATRPDCLEDEVLDLIEELSKKLYVWVEL 150

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++ ++  + + R ++      AI   +     +    I  LP ++       +    
Sbjct: 151 GLQTINDKVAKKINRGYDLKVFDDAIARLKERNIDVVVHSILGLPGESQDDMLKTIDYIA 210

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                 + L+ L + K T   ++++ G+L   S+   + L     S+     +  
Sbjct: 211 HSGAQGIKLHLLHLMKDTKMVELYESGELQFLSQEDYIKLICKAVSMLPKEMVVH 265


>gi|162447115|ref|YP_001620247.1| radical SAM superfamily Fe-S oxidoreductase [Acholeplasma laidlawii
           PG-8A]
 gi|161985222|gb|ABX80871.1| Fe-S oxidoreductase, radical SAM superfamily [Acholeplasma
           laidlawii PG-8A]
          Length = 314

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 66/201 (32%), Gaps = 5/201 (2%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S +       +    S   + + ++Q    +    ++      +      +  + +
Sbjct: 48  CTFCSWMGSGDFAGDKR-DSLKVQFENIKQQMHKKWKDGLYIAYFQANTNTHAPLPRLKE 106

Query: 95  GIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVN---RISLGVQSLEEQSLRFLGR 150
              +  T+   +  I++   P S+  +      +       ++ LG+Q++ + +   + R
Sbjct: 107 IYEEAITLDPKIVMISLGTRPDSLPEDVLDYLEELNTRMPVQVELGLQTIHQSTSDLINR 166

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            H+      A+         +   +I  LP +        ++   +  +  + ++ L + 
Sbjct: 167 AHDLKTFDDAVLRLHKRGIEVVVHIINGLPTEDKKMMLDTVKHLNTLPIQGIKIHMLHLM 226

Query: 211 KGTLFYKMHKDGDLVLPSENV 231
           + T     +      L +   
Sbjct: 227 EKTKMGYDYIQNPWELLTLEE 247


>gi|332306418|ref|YP_004434269.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173747|gb|AEE23001.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 477

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 78/226 (34%), Gaps = 16/226 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN-- 88
           C  YC F              +   L E+  + +  G R ++ +  G    +   P +  
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVDDVLLEVAQLAEQ-GVREVNLL--GQNVNAFRGPHHDG 213

Query: 89  ----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                A +L+ +A    +      T  ++P     +  + Y      V+ + L VQS  +
Sbjct: 214 AICTFAELLEMVASIDGIDRIRYTT--SHPVEFTDDIIEAYATIPELVDHLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R I P +S   D I   P ++ T +E  +    +   D
Sbjct: 272 RVLNLMKRGHTAIEYKSKIRKLRKIRPNLSMSSDFIIGFPGESDTDFEATMDLIQAMDFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +  +   GT    +  D       E + +    +TQ      
Sbjct: 332 LSFSFIYSARPGTPAADLPDDVSEATKKERLQLLQNRITQQALRIA 377


>gi|20094368|ref|NP_614215.1| Fe-S oxidoreductase family protein [Methanopyrus kandleri AV19]
 gi|38258812|sp|Q8TWU9|Y932_METKA RecName: Full=Uncharacterized protein MK0932
 gi|19887436|gb|AAM02145.1| Fe-S oxidoreductase family protein [Methanopyrus kandleri AV19]
          Length = 523

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 25/225 (11%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSLIEP---- 86
           C F S    +   +   +   + E++ + +    R + S    + +G G   L+      
Sbjct: 220 CGFCSVPSIFGPTRSRPLNEVVREVRGLVREGIRRVVLSASDVLDYGRGD--LLTDPRTP 277

Query: 87  ----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLE 141
               + +  +L   +K+  V              +     +   +      +S+GV++ +
Sbjct: 278 PPNVEALRRLLRRTSKHVDVL----FVENVKACLLNREIAELLGEYCRGTSVSVGVETGD 333

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME---LQRALSYA 198
            + LR +G+     EA+ AI L R    R     +Y LP QTM   ++    ++RA+   
Sbjct: 334 PRLLRAIGKPSTLKEALRAIRLLRRAGLRPHAYFVYGLPGQTMKSAKLTAKAMKRAVEMG 393

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            + +++Y+      + F           P  + A  L   T    
Sbjct: 394 AEKITVYRFRPIPASAFGDFPPGPS---PRNDEASRLIADTARRL 435


>gi|152996920|ref|YP_001341755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
 gi|229890562|sp|A6VZE1|MIAB_MARMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|150837844|gb|ABR71820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
          Length = 451

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 78/219 (35%), Gaps = 12/219 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSLIEP 86
           C  YC F                S L E+  + +  G R I     ++    G  +  + 
Sbjct: 156 CSKYCTFCVVPYTRGEEVSRPFDSILKEVVQLAEQ-GVREIHLLGQNVNAYRGDTAEGDE 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A I+  +A+   V      T  ++P     +  + +R     V+ + L VQS  +  
Sbjct: 215 ADLADIIHAVAQIDGVERIRFTT--SHPVEFSDSLIEAFRNEPKLVSHLHLPVQSGADNI 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H+    I  I+  +   P +S   D I   P +T   +   +        DH 
Sbjct: 273 LSAMKRGHDRQYYIDKINRIKEARPGISLSSDFIIGFPGETDDDFVDTMNLIQEIGFDHS 332

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  +   GT    +  D    +  E +A+    ++Q 
Sbjct: 333 FSFVYSQRPGTPASNLEDDTPEDVKKERLAILQRRISQQ 371


>gi|212638270|ref|YP_002314790.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
 gi|212559750|gb|ACJ32805.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
          Length = 319

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C                    +T+   +++    +     +             + +
Sbjct: 54  CTFCS----AAGSGDFAGRRTDDLVTQFHTIKEKMHTKWKDGKYIAYFQAFTNTHAPVDV 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +       +   V ++I   P  +  +      +        + LG+Q++ EQ+   +
Sbjct: 110 LREKFESVLHLEGVVGLSIATRPDCLPDDVVDYLAELNERTYLWVELGLQTVHEQTATLI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ S  +  +   R    R+   +I  LP +T        +      V  + ++ L 
Sbjct: 170 NRAHDFSCYVEGVQKLRKHGIRVCAHIINGLPLETYDMMMETAKTVAHLDVQGIKIHLLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   + +  V L      +     +  
Sbjct: 230 LLKGTPMVKQYEKGMLRFLTFDEYVQLVCDQLEVLPPEMIIH 271


>gi|157692385|ref|YP_001486847.1| tRNA 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
 gi|229890424|sp|A8FDH0|MIAB_BACP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157681143|gb|ABV62287.1| tRNA 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
          Length = 508

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC            +       + E++ +             ++   G     +
Sbjct: 220 CDKFCTYC---IVPYTRGKERSRRPDEIIQEVRRLAAEGYKEITLLGQNVNAYGKDFEDM 276

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E   +  ++D + K   +         ++P   + +  +   K G  ++ I L VQS   
Sbjct: 277 E-YGLGHLMDELRK---IDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSS 332

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L        D
Sbjct: 333 SVLKLMARKYDRERYLDLVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFD 392

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 393 AAYTFIYSPREGTPAAKMQDNVPMH--VKKERLQRLNALVNEISAKKMKEYE 442


>gi|188588298|ref|YP_001920864.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498579|gb|ACD51715.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 288

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 98/257 (38%), Gaps = 24/257 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    + + K+     ++    E+ + R +     +  IF   G   +I  
Sbjct: 24  CSHNKCSFCN----MYKSKIFTIKSLEEIKKEIDYFRTIYKY--VEKIFLADGDALIIPI 77

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL+             +T+  +P S+    +   +  +K G+  I +G++S +++
Sbjct: 78  GDLKSILE--YIKNVFPECTRVTMYGSPKSILLKSIEELEELKKLGLYMIYMGIESGDDE 135

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +  ++ E I A    +     +S  +I  +    +++       +       D+
Sbjct: 136 VLLDINKGVSSKELIKATQKVKKSKITLSVTVIAGIGGKEKSINHAINTGKIISEIEPDY 195

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           L +  L +EKGT  Y    + +  + ++   +D   L             ++SNH  +  
Sbjct: 196 LGVLTLMLEKGTDLYNKILNKEFNVLNDKDILDEIKLLIE--------NIDVSNH--VIF 245

Query: 262 ESLHNLNYWRYGDYIGI 278
              H  NY      + I
Sbjct: 246 RCNHASNYISLKGTLPI 262


>gi|299133384|ref|ZP_07026579.1| RNA modification enzyme, MiaB family [Afipia sp. 1NLS2]
 gi|298593521|gb|EFI53721.1| RNA modification enzyme, MiaB family [Afipia sp. 1NLS2]
          Length = 476

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 75/200 (37%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C          +     + + + +++ +    G R I+    ++    G  + 
Sbjct: 166 CDKFCTFC---VVPYTRGMEVSRPVAAIVDDVKRLAD-NGVREITLIGQNVNAYHGEGAS 221

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  ++  +L  +A    +      T  ++P  V+ +  + +R     +  + L VQS  
Sbjct: 222 GQAWSLGRLLHHLASVPGIVRLRYST--SHPRDVDDSLIEAHRDIPAVMPFVHLPVQSGS 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A++ I  I   R   P++  S D I   P +T   +   L      + 
Sbjct: 280 DRILAAMNRKHAAADYIRTIERFRKASPKIAFSSDFIVGFPGETEQDFSDTLALVTQISY 339

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
                ++ +   GT    M 
Sbjct: 340 AGAYSFKYSPRPGTPAADMQ 359


>gi|149378505|ref|ZP_01896181.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter algicola
           DG893]
 gi|149357211|gb|EDM45757.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter algicola
           DG893]
          Length = 417

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 89/247 (36%), Gaps = 21/247 (8%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+   G++    +V     C K   YC F              +   + E+  +    G
Sbjct: 108 DNLPDPGADGPSAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPVDDVIAEVAHLASQ-G 163

Query: 68  PRSISSI-----FFGG--GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            R ++ +      + G      +++   +  ++  I     +         ++P     +
Sbjct: 164 VREVNLLGQNVNAYRGETHDGDVMDMAELVTLIATIDGIDRIRYTT-----SHPVEFSDS 218

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
             + Y +    V+ + L VQS  ++ L  + R H A E  + +   R I P +SF  D I
Sbjct: 219 LIEAYEQVPELVSHLHLPVQSGSDRVLAAMKRGHTALEYKSKLRRLRKIRPDISFSSDFI 278

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
              P +T   ++  ++       D    +  +   GT    +  D  L +  + +++   
Sbjct: 279 IGFPGETEKDFQDTMKLINDIGFDMSFSFIYSARPGTPAADLPDDTPLEVKKQRLSILQD 338

Query: 237 NLTQSIT 243
            L Q++ 
Sbjct: 339 RLNQNVM 345


>gi|90416864|ref|ZP_01224793.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine gamma
           proteobacterium HTCC2207]
 gi|90331211|gb|EAS46455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine gamma
           proteobacterium HTCC2207]
          Length = 451

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 86/266 (32%), Gaps = 25/266 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    ++ +  +V     C K   YC F              +   L E+  + Q  G
Sbjct: 147 DRLPTPEADGVSAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPMADVLAEIAALAQQ-G 202

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            R ++ +      + G  P      + A +L  +A    +      T  ++P        
Sbjct: 203 VREVNLLGQNVNAYLGEMPDG-SICDFAELLPYVADIAGIDRIRYTT--SHPVEFSDRLI 259

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
           + Y +    V+ + L VQS  ++ L  + R H A E  + I   R + P +S   D I  
Sbjct: 260 ETYARVPELVSHLHLPVQSGSDKILMAMKRGHTAIEYKSKIRRLREVRPDISISSDFIIG 319

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P ++   +   ++       D    +  +   GT            LP           
Sbjct: 320 FPNESEEDFSATMKLISDIGFDTSFSFIYSARPGTPAA--------DLPDNTSEAVKKQR 371

Query: 239 TQSITSAHGLHAYEISNHSFLGAESL 264
            + +      +A EIS       E L
Sbjct: 372 LKILQDRISQNAAEISRRMVGKREKL 397


>gi|45659013|ref|YP_003099.1| hypothetical protein LIC13191 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602258|gb|AAS71736.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 565

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 60/166 (36%), Gaps = 8/166 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    H       + N ++  L+E++   +L          F     +   P+
Sbjct: 239 CPHRCSFCS--VHTTFGTKYRRNTVERVLSEIKKSYELGY----RVFDFEDDNLTFFRPE 292

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  + + +   +       + +      S++    +  ++AG   ++L + S ++    
Sbjct: 293 -MKQLCEELIDAFPKKDVRFVAMNGISYISLDPELLRLMKEAGFTNLNLALVSSDKLVRE 351

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
              R H   + I  +     +  +++   I  LP +T+      LQ
Sbjct: 352 TTKRPHTVEKYIQIVQEGFKLGFQITSYQILGLPMETLESMIQTLQ 397


>gi|312623497|ref|YP_004025110.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203964|gb|ADQ47291.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 351

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     NS  +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNSQAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+        + S+V++ I  +      + ++ ++ AG +R  +  ++  E+
Sbjct: 114 YTKDMLCSIIK------KIKSSVDVAITLSIGERSYDEYKAFKDAGADRFLMRFETSNEE 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +      +  + I  +   +N+   +    +  LP QT+     ++        D + 
Sbjct: 168 LYKKYHPGMSFEKRIECLKWIKNLGYELGTGFLIGLPGQTIDDLAQDILLVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|30577693|emb|CAD18984.1| putative methyltransferase [Streptomyces cattleya]
          Length = 484

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 7/169 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +++ G      S    +  +R+L        I        + +  
Sbjct: 209 CSYACAYC-----YSKHQWGVGQRRHSAARVVDEIRELVEVYGFDRIRIEDDDF-VEDVP 262

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  + DGIAK+  +    E   +A P  +  +  +  R++G  R+ +GV++L    L+ 
Sbjct: 263 RMQELCDGIAKS-GLQGKFEWEAKARPDLINDDMARMLRESGCFRLLVGVETLSWNLLKR 321

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           LGR         AI    N    +   +I  +P +T       +    +
Sbjct: 322 LGRPVKVDVTERAISCLTNNGIGVQATMILGIPGETDEAMRTTITWLQA 370


>gi|86359534|ref|YP_471426.1| hypothetical protein RHE_CH03954 [Rhizobium etli CFN 42]
 gi|86283636|gb|ABC92699.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 423

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 86/235 (36%), Gaps = 31/235 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------G 79
           C  +C +C            +   + + + + + +   +G R I               G
Sbjct: 147 CDHRCTFC---IIPYGRGNSRSVPMGAVVDQARRLAD-SGYREIVLTGVDATSYGSDLPG 202

Query: 80  TPSL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
           TP+L  +    +  I D       +SS   I  +A+   +     +         + L +
Sbjct: 203 TPTLGLLAKTLLKQIPDIRR--LRLSSIDSIEADAHLMDLIAEEPRFM-----PHLHLSL 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H+ ++A+  I   R + P MSF  D+I   P +T   +   ++ A 
Sbjct: 256 QHGDDMILKRMKRRHSRADALRFIEDVRRLRPEMSFGADMIAGFPTETEEMFANAVRLAE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              + HL ++  +   GT   +M        P  + ++      +   + H LH 
Sbjct: 316 EAGIAHLHVFPYSPRPGTPAARM--------PQLDRSLVKDRAARLRDTGHRLHQ 362


>gi|329897206|ref|ZP_08271946.1| tRNA-i(6)A37 methylthiotransferase [gamma proteobacterium IMCC3088]
 gi|328921361|gb|EGG28755.1| tRNA-i(6)A37 methylthiotransferase [gamma proteobacterium IMCC3088]
          Length = 434

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 12/217 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+    +  G + +     ++    G   L E 
Sbjct: 147 CSKYCSFCVVPYTRGEEVSRPLDDVIAEVAHAAEH-GVKEVNLLGQNVNAYRGLNYLGEV 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A +L  IA+   +      T  ++P          Y +    V+ + L VQS  ++ 
Sbjct: 206 VDFAELLTYIARIPAIERIRYTT--SHPVEFSQALIDVYAEIPQLVDHLHLPVQSGSDRI 263

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E  + I   R I P +S   D I   P +T   +   ++       D  
Sbjct: 264 LAAMKRGHTALEYKSKIRALRKIRPNISMSSDFIVGFPGETDADFNATMKLIEDIGYDSS 323

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             +  +   GT    +  D  + +  + + +    + 
Sbjct: 324 FSFIYSARPGTPAADLVDDTPMEVKKQRLQILQARIA 360


>gi|317475986|ref|ZP_07935241.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316907918|gb|EFV29617.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 487

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E +++        +  +     T +  + +
Sbjct: 218 CPFRCNFCVYP-QTMHGHAFRARSAENVVAEFEYIAANFPD--VKEVVIEDDTFTANKKR 274

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +I  +L        +       +     ++++   +  +KAG   I  G++S  +Q L
Sbjct: 275 VLDICRLLIEKKLYKRLKWLCNARV-----NLDLETMRTMKKAGCRLIIPGIESGSQQIL 329

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +     +    +  A+     +    +     +T       LQ AL    D    +
Sbjct: 330 DNIKKGTKVEQFYEYVANAKKAGLLIHACYMVGNEGETKDTMNETLQLALRLNTDTAQFF 389

Query: 206 QLTIEKGTLFYKM 218
            L    GT  Y+ 
Sbjct: 390 PLIPYPGTEAYQW 402


>gi|255534247|ref|YP_003094618.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Flavobacteriaceae bacterium 3519-10]
 gi|255340443|gb|ACU06556.1| tRNA-i(6)A37 methylthiotransferase [Flavobacteriaceae bacterium
           3519-10]
          Length = 508

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 4/165 (2%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + V+ F+   K       + L VQS  ++ L  + R H  +E +  I+ A+ I P
Sbjct: 297 SNPHDMTVDVFEVMAKHDNICKYVHLPVQSGSDRILEKMNRQHTRAEYLNLINRAKEIVP 356

Query: 170 RMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            +SF  D+I     +T    ++ L        D+  ++  +   GT  ++  +D      
Sbjct: 357 EISFSQDMIIGFCGETEEDHQLTLSLMREVEYDYGYMFAYSERPGTPAHRKMEDDVPADV 416

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRY 272
            +    ++  L   ++           +   +   S  N N W+ 
Sbjct: 417 KQRRLAEVIALQGELSRKRMQGYAGRMHEVLIEGTSKKNQNQWKG 461


>gi|15892503|ref|NP_360217.1| hypothetical protein RC0580 [Rickettsia conorii str. Malish 7]
 gi|15619661|gb|AAL03118.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 421

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 148 CDHFCTFC-----IIPYGRGKSRSVA--IGAIAEQVKHLVLNGFKEVVFTGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + 
Sbjct: 201 LPGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 LQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 316 SEAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAAILRQEGQNQLTEFFKKHI 370


>gi|326791229|ref|YP_004309050.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
           5427]
 gi|326541993|gb|ADZ83852.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
           5427]
          Length = 435

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 71/207 (34%), Gaps = 26/207 (12%)

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +   ++  +L  + +   V      +IE  P ++        ++     +   L +QS  
Sbjct: 208 LGNTDLIQLLKRVHEIEGVERIRMSSIE--PVAITDEFIYALKEMPKVCHHFHLSLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           E  L+ + R + A E  A++   R ++P ++   D+I   P +T  ++   ++      +
Sbjct: 266 ETILKRMNRKYTAVEYKASVERLRTLWPDVAITTDVIVGFPGETEEEFLETVEFVKDVHL 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA-----------VDLYNLTQSITSAHGL 248
             + ++  +  +GT   KM       +                   +             
Sbjct: 326 AQIHIFPFSPREGTPAAKMRAQVAPEIKEHRAKVLSEVEKTLRLAYMEQFIDKELEVLFE 385

Query: 249 HAYEI------SNHSF---LGAESLHN 266
             +E       SN+     LG E++ N
Sbjct: 386 KHHENEVTGYTSNYLKVQVLGNETIEN 412


>gi|304404333|ref|ZP_07385995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus
           curdlanolyticus YK9]
 gi|304347311|gb|EFM13143.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus
           curdlanolyticus YK9]
          Length = 530

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 12/220 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R K              +  RQ     ++   ++   G   +   
Sbjct: 241 CDKFCTYC--IVPYTRGKERSRLPADIIAEVRELARQGYKEVTLLGQNVNAYGKDFT--- 295

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             +     D +A    ++      + ++P   + +  +   + G  V  I L VQS    
Sbjct: 296 -DDNYRFADLMADISQIAIPRIRFMTSHPRDFDDHLIEVLAQGGNLVEHIHLPVQSGSSA 354

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++  + ++  +  +   P +    D+I   P ++  Q+E  L        D 
Sbjct: 355 ILKRMSRKYSREQFLSLANRIKQAIPNVVLTTDIIVGFPGESEEQFEETLTLVREVGFDL 414

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              +  +  +GT    M  D  +    + ++     + + 
Sbjct: 415 AYTFIYSPREGTPAADMEDDVPMETKKKRLSRLNELMAEQ 454


>gi|91204926|ref|YP_537281.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii
           RML369-C]
 gi|122426084|sp|Q1RKC2|MIAB_RICBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91068470|gb|ABE04192.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii
           RML369-C]
          Length = 446

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 67/226 (29%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R      N  Q +   ++ +        +   ++    G  S   
Sbjct: 162 CDKFCTFC--VVPYTRGAEFSRNVEQVYREALKIVSSGAKEIMLLGQNVNAYHGKTS--- 216

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN--FQGYRKAGVNRISLGVQSLEE 142
              +  + D I     + +   +     +P  +  +     G     +  + L VQS   
Sbjct: 217 DDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSN 276

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++L+ + R H+       I   R     +  S D I   P +T   +   L         
Sbjct: 277 KTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDLVRKVKYG 336

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ +   GT            + SE + +    L     + +
Sbjct: 337 QCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQKELAAQQLAFN 382


>gi|34580504|ref|ZP_00141984.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28261889|gb|EAA25393.1| unknown [Rickettsia sibirica 246]
          Length = 416

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 143 CDHFCTFC-----IIPYGRGKSRSVA--IGAIAEQVKHLVLNGFKEVVFTGVDVTAYGSD 195

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + 
Sbjct: 196 LPGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 250

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 251 LQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLI 310

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 311 SEAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAAILRQEGQNQLTEFFKKHI 365


>gi|281411540|ref|YP_003345619.1| MiaB-like tRNA modifying enzyme [Thermotoga naphthophila RKU-10]
 gi|281372643|gb|ADA66205.1| MiaB-like tRNA modifying enzyme [Thermotoga naphthophila RKU-10]
          Length = 434

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC     + R    +   ++ F    ++ + +      I+ +  G         
Sbjct: 147 CDNTCTYCA--IRLARGSKIRSKPLEIFKDEFVEMVAKGYKEIVITGVNLGKYG-----K 199

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              + + + +     V  +  + +   N   V     + +++       + + VQS  + 
Sbjct: 200 DMGSSLAELLKVIEKVPGDYRVRLSSINVEDVNDEIVEAFKRNPRLCPHLHISVQSGSDD 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +  S+ +  +   R+I P  S   D+I   P +T   ++  L          
Sbjct: 260 VLKRMGRKYRISDFMRVVDKLRSIDPDFSITTDIIVGFPGETDDDFQKTLDLVEKVGFSR 319

Query: 202 LSLYQLTIEKGTLFYKM 218
           + +++ +   GT   +M
Sbjct: 320 VHIFRFSPRPGTPASRM 336


>gi|229586694|ref|YP_002845195.1| MiaB-like tRNA modifying enzyme [Rickettsia africae ESF-5]
 gi|228021744|gb|ACP53452.1| MiaB-like tRNA modifying enzyme [Rickettsia africae ESF-5]
          Length = 421

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 25/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---------- 77
           C   C +C     +  Y  G+   + +    ++ ++ L        +F G          
Sbjct: 148 CDHFCTFC-----IIPYGRGKSRSV-AIGAIVEQVKHLVLNGFKEVVFTGVDVTAYGSDL 201

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
            G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + +
Sbjct: 202 PGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHISL 256

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   Q   
Sbjct: 257 QAGDDMILKRMKRRHNRASVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRQLIS 316

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 317 EAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAAILRQEGQNQLTEFFKKHI 370


>gi|148269242|ref|YP_001243702.1| MiaB-like tRNA modifying enzyme [Thermotoga petrophila RKU-1]
 gi|147734786|gb|ABQ46126.1| MiaB-like tRNA modifying enzyme [Thermotoga petrophila RKU-1]
          Length = 434

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC     + R    +   ++ F    ++ + +      I+ +  G         
Sbjct: 147 CDNTCTYCA--IRLARGSKIRSKPLEIFKDEFVEMVAKGYKEIVITGVNLGKYG-----K 199

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              + + + +     V  +  + +   N   V     + +++       + + VQS  + 
Sbjct: 200 DMGSSLAELLKVIEKVPGDYRVRLSSINVEDVNDEIVEAFKRNPRLCPHLHISVQSGSDD 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR +  S+ +  +   R+I P  S   D+I   P +T   ++  L          
Sbjct: 260 VLKRMGRKYRISDFMRVVDKLRSIDPDFSITTDIIVGFPGETDDDFQKTLDLVEKVGFSR 319

Query: 202 LSLYQLTIEKGTLFYKM 218
           + +++ +   GT   +M
Sbjct: 320 VHIFRFSPRPGTPASRM 336


>gi|317061375|ref|ZP_07925860.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313687051|gb|EFS23886.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 238

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 88/256 (34%), Gaps = 35/256 (13%)

Query: 147 FLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L R  +  EA+  +   R  F  +   D+IY  P+Q+  +   +++ A    VD +S Y
Sbjct: 1   MLNRTFSKEEAVQRLQDLRKAFHGLLCIDIIYNYPEQSDEEVLEDIRIASDLGVDSISFY 60

Query: 206 QLTIEKGTLFYKMHKD--GDLVLPSENVAVDLYNLTQSITSAHG--LHAYEISNHSFLGA 261
            L I++G+   K       +     +          Q         L   +I+N      
Sbjct: 61  SLMIQEGSEILKNISKESIEKFYDIKRDEHLHNLFYQESLRRGYSLLELTKITN------ 114

Query: 262 ESLHNLNYWRYGDYIGIGPGAHSRV-KVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
                  Y R  + + IG GA   V  +  + +   +  + ++    +R +         
Sbjct: 115 -GRDKYQYIRTHNLLPIGVGAGGHVEDISCYHMNKKMSFYSKTPKDSIRMSQ-------- 165

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECER--NLQRQGFIERVQFSRLRC 378
                      + GL   +  S    + L G       E+     + G++ + +  +   
Sbjct: 166 -----------LSGLFQFDSFSEIKLQELTGTRYPKVREKIEEYIKMGWL-QYKNKQFSY 213

Query: 379 TQRGMTMLDSVIANLA 394
           T+ G+   +++ A L 
Sbjct: 214 TENGVFWGNNINAELL 229


>gi|254431186|ref|ZP_05044889.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cyanobium sp. PCC 7001]
 gi|197625639|gb|EDY38198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cyanobium sp. PCC 7001]
          Length = 476

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 70/227 (30%), Gaps = 16/227 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +S+  +V+  + C ++C YC            Q    ++   EM+ +   
Sbjct: 161 LEDITTARRDSSVCAWVNVIYGCNERCTYC---VVPSVRGQEQSRLPEAIRLEMEGLAAR 217

Query: 66  TGPRSISSIF----FGGGTPSLIEPQNIAL--ILDGIAKNWTVSSNVEITIEA-NPSSVE 118
               +         +G   P +  P+      + D +     V     I     +P    
Sbjct: 218 GFKETTLLGQNIDAYGRDLPGI-TPEGRRRHTLTDLLQFVHDVEGIERIRFATSHPRYFT 276

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
                             +  QS ++  L+ + R +        +H  R   P   +S D
Sbjct: 277 ERLIDACAALPKVCEHFHIPFQSGDDAVLKAMARGYTVERYRRIVHRIRERMPDAAISAD 336

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +I A P +T  Q+   L+       D ++    +    T        
Sbjct: 337 VIVAFPGETDAQFRNTLRLVEEIGFDQVNTAAYSPRPNTPAADWPDQ 383


>gi|33240828|ref|NP_875770.1| 2-methylthioadenine synthetase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81664182|sp|Q7VAS5|MIAB_PROMA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33238357|gb|AAQ00423.1| 2-methylthioadenine synthetase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 466

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 80/224 (35%), Gaps = 16/224 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+    +  +++  +V+  + C ++C YC   S   + +  +   I+  + ++      
Sbjct: 150 LEDLTAARRDSNICAWVNVIYGCNERCTYCVVPSVRGKEQSREPKAIKLEIEDLAKK--- 206

Query: 66  TGPRSISSI-----FFGGGTPSLIE-PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
            G + ++ +      +G   P +    +    + D +     ++    I     +P    
Sbjct: 207 -GFKEVTLLGQNIDAYGRDLPGISSSGRRENTLTDLLYFIHDINGINRIRFATSHPRYFT 265

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
               +   +         +  QS + + L+ +GR +   +    I   R + P   +S D
Sbjct: 266 TRLIEACAELPKLCEHFHIPFQSGDNEVLKRMGRGYTIEKYRRIIDKIRELMPNSSISSD 325

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +I A P +  +Q++  L+       D ++    +    T     
Sbjct: 326 VIVAFPGEDESQFQNTLKIIREIGFDQVNTAAYSQRPNTPAASW 369


>gi|307243292|ref|ZP_07525459.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
 gi|306493310|gb|EFM65296.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
          Length = 431

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 10/204 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC            +    QS + E++ +        + + I        L E 
Sbjct: 152 CDRYCSYC---IIPYARGRIRSRDRQSIIEEIEKLAANGYKEVVLTGIHVASYGRDLDED 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +I  ++  + K   +      ++E  P     +      K    V    L +QS  + +
Sbjct: 209 IDILTVIKDVNKVEGIERIRLSSVE--PVLFTEDFIDQISKIDKLVPHYHLSLQSGCDAT 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   +    +   R   PR+S   D+I   P +T  ++   L       + H+
Sbjct: 267 LKRMNRRYTTEDYKRTVDNLRARIPRVSLTTDVIVGFPGETNEEFSQTLAYLKDLKLMHM 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVL 226
            +++ +  KGT    M    D  +
Sbjct: 327 HVFKYSPRKGTPAAVMEDQVDPQM 350


>gi|291562918|emb|CBL41734.1| Fe-S oxidoreductase [butyrate-producing bacterium SS3/4]
          Length = 290

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 89/215 (41%), Gaps = 9/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C+    V++++V  +   +  + ++   R   GP  +S +FF  G   +++ 
Sbjct: 25  CAHNRCTFCNMY-RVKKFRVRTK---EEIMKDLDECRDYYGPY-VSRVFFADGDALVVKT 79

Query: 87  QNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  +L  + KN+     +       +  +    + +    AG+  + +G +S +++ L
Sbjct: 80  ELLLELLAYVHKNFPYVERITSYGTAKDVLAKSEEDLKALAAAGLEMVYIGAESGDDRVL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLS 203
             + ++  A++  AA    +    + S  LI  L  +           +       ++ S
Sbjct: 140 EHIHKDVTAAQIAAAGQKLKRCGIKTSVTLISGLGGRKGIREHAIKSAELINQMNPEYAS 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              L + +GT   +  K G++ L + +  V+   L
Sbjct: 200 FLTLRLYEGTQMNEEVKRGEMELITPDEIVEEMEL 234


>gi|52425745|ref|YP_088882.1| MiaB protein [Mannheimia succiniciproducens MBEL55E]
 gi|81386786|sp|Q65RW3|MIAB_MANSM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|52307797|gb|AAU38297.1| MiaB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 474

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 66/203 (32%), Gaps = 20/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPS-- 82
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPTHD 212

Query: 83  --LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +     +  ++  I     +         +NP     +    YR     V+ + L VQ
Sbjct: 213 GGICSFAELLRLVAAIDGIDRLR-----FTTSNPIEFTDDIIDVYRDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +  ++ L  + R H A E  + I    A     ++S D I   P +T  ++E  +     
Sbjct: 268 AGSDRILTMMKRGHTAIEYKSIIRKLRAVRPNIQISSDFIVGFPGETNEEFEQTMNLIQQ 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D    +  +   GT    M 
Sbjct: 328 VNFDMSFSFVYSARPGTPAADMP 350


>gi|325285677|ref|YP_004261467.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Cellulophaga lytica DSM 7489]
 gi|324321131|gb|ADY28596.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Cellulophaga lytica DSM 7489]
          Length = 480

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 22/223 (9%)

Query: 15  GSNSLGVYVHWP-FCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRS 70
            +N +  YV     C   C +C   F     R +  Q    +      +  +++    ++
Sbjct: 166 NTNGISAYVSITRGCDNMCTFCVVPFTRGRERSREPQSILEEVNDLWNRGYKEITLLGQN 225

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-----------EANPSSVEV 119
           + S  + GG    ++           A     ++ +E+T             +NP  + +
Sbjct: 226 VDSYLWYGGG---LKKDFNQATEMQKATAVNFANLLEMTAIAQPKMRIRFSTSNPQDLTL 282

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDL 175
           +  +   K       I L VQS  ++ L+ + R H   E    I   R I P   +S D+
Sbjct: 283 DVVKTMAKYDNICKHIHLPVQSGSDRILKAMNRLHTREEYFTLIDNIRQIIPDCAISQDM 342

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           I   P +T    +  L        D   +Y  +   GT+  + 
Sbjct: 343 IAGFPTETEEDHKDTLSLLEYVKYDFGYMYSYSERPGTMAARK 385


>gi|219871156|ref|YP_002475531.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           parasuis SH0165]
 gi|219691360|gb|ACL32583.1| bifunctional enzyme involved in thiolation andmethylation of tRNA
           [Haemophilus parasuis SH0165]
          Length = 463

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 77/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 144 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 199

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG   +     +  ++  I     V         ++P     +  + Y+     V+ + L
Sbjct: 200 GG---ICSFAELLRLVASIDGIDRVRYTT-----SHPIEFTDDIIEVYKDTPELVSFLHL 251

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R   P   +S D I   P +T   +E  ++ 
Sbjct: 252 PIQSGSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAQDFEQTMKI 311

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    +       +  +     LY L Q I +   
Sbjct: 312 IEQVNFDMSFSFIYSARPGTPAADLPD----DVTEDEKKERLYRLQQRINNQAM 361


>gi|167856488|ref|ZP_02479203.1| hypothetical protein HPS_09340 [Haemophilus parasuis 29755]
 gi|167852383|gb|EDS23682.1| hypothetical protein HPS_09340 [Haemophilus parasuis 29755]
          Length = 463

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 77/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F              +   L E+  + +  G R ++ +           F 
Sbjct: 144 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGETFD 199

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG   +     +  ++  I     V         ++P     +  + Y+     V+ + L
Sbjct: 200 GG---ICSFAELLRLVASIDGIDRVRYTT-----SHPIEFTDDIIEVYKDTPELVSFLHL 251

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + RNH A E  A I   R   P   +S D I   P +T   +E  ++ 
Sbjct: 252 PIQSGSDRVLTMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAQDFEQTMKI 311

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    +       +  +     LY L Q I +   
Sbjct: 312 IEQVNFDMSFSFIYSARPGTPAADLPD----DVTEDEKKERLYRLQQRINNQAM 361


>gi|160939143|ref|ZP_02086494.1| hypothetical protein CLOBOL_04037 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438106|gb|EDP15866.1| hypothetical protein CLOBOL_04037 [Clostridium bolteae ATCC
           BAA-613]
          Length = 502

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +++L     +  +  G    S    L
Sbjct: 216 CNNFCSYC-----IVPYVRGRERS-RRPEEIIKEIQKLAADGVVEIMLLGQNVNSYGKNL 269

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L+ + K   +       + ++P  +     +   ++      + L +QS  
Sbjct: 270 DNPMTFAQLLEEVEKIDGIERIRF--MTSHPKDLSDELIEVMARSEKICRHLHLPLQSGS 327

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +      +   P +S   D+I   P +T   +E  +        
Sbjct: 328 SRILKVMNRRYTKEQYLDLAERIKKAVPGISLTTDIIVGFPGETDEDFEETMDVVRRVGF 387

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 388 DSAFTFIYSKRTGTPAAAM 406


>gi|149181474|ref|ZP_01859970.1| YtqA [Bacillus sp. SG-1]
 gi|148850875|gb|EDL65029.1| YtqA [Bacillus sp. SG-1]
          Length = 322

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              + +     +   ++              +F   T +    + 
Sbjct: 57  CTFCS----AAGSGDFAGSRVDPLEKQFNDIKERMHRKWKDGKYMAYFQAFTNTHAPVEE 112

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + + K   +   V I+I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 113 LREKYESVLKQEGI---VGISIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHEKTA 169

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  ++  R    R+   +I  LP++         +      V  + ++
Sbjct: 170 SMINRAHDYQCYVEGVNKLRKHGIRVCSHIINGLPQEDYNMMMETAKEVAKLDVQGIKIH 229

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + KGT   K ++ G L   S    V L      I     +  
Sbjct: 230 LLHLLKGTPMVKQYEKGQLEFLSFEEYVSLVCDQLEILPPEMIVH 274


>gi|167039974|ref|YP_001662959.1| MiaB-like tRNA modifying protein [Thermoanaerobacter sp. X514]
 gi|300914064|ref|ZP_07131380.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
 gi|307724703|ref|YP_003904454.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
 gi|166854214|gb|ABY92623.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X514]
 gi|300888999|gb|EFK84145.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
 gi|307581764|gb|ADN55163.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
          Length = 449

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 21/235 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGV---------YVHWP-FCVKKCPYCDFNSHVRRYKVGQENF 51
           + LS   N MT +     GV         Y+     C + C YC     +   +    + 
Sbjct: 130 QKLSVVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYC----IIPYARGPVRS- 184

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
            +     +  +++         +  G    S  +      +LD I     +     I + 
Sbjct: 185 -RDPKKVLDEVKRFADSGYKEIVLTGIHIASYGKDLKNIGLLDIIKMIHEIDGIKRIRLS 243

Query: 112 -ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              P+ +     +             + +QS  +++L+ +GR +   E  + I   R   
Sbjct: 244 SIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREYI 303

Query: 169 PRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   D++   P +T  ++    +         + +++ +  KGT  Y     
Sbjct: 304 KDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQ 358


>gi|91773329|ref|YP_566021.1| MiaB-like tRNA modifying enzyme [Methanococcoides burtonii DSM
           6242]
 gi|91712344|gb|ABE52271.1| Radical SAM family protein with UPF0004 and MiaB-like domains
           [Methanococcoides burtonii DSM 6242]
          Length = 430

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 26/206 (12%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFG 77
           +H       C   C YC     V   +    +F   S + +++            +    
Sbjct: 142 IHICQISQGCDYSCAYC----IVTIARGKLRSFDADSIVEDIRMAVDEGCREIWLTSQDN 197

Query: 78  GGTPS---LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV---NNFQGYRKAGV 130
           G   +   ++ P+ +  I+        +  + +I +   NP SV     +  + +R   +
Sbjct: 198 GQYGTDRDVLLPELLRRIVA-------IPGDFKIRVGMMNPFSVTPILDDLIEVFRSDKI 250

Query: 131 -NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
              + L +QS  +  L+ + R H+  EA   +   R  FP ++   D+I     ++   +
Sbjct: 251 YKIVHLPIQSASDNVLKKMNRYHSIEEANGIVFRLREAFPDLTLFTDIIVGFSSESDNDF 310

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGT 213
            M L+   +   D +++ + T    T
Sbjct: 311 NMTLEWVKTMKPDKVNISRYTPRPLT 336


>gi|169343507|ref|ZP_02864506.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
           JGS1495]
 gi|169298067|gb|EDS80157.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
           JGS1495]
          Length = 434

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++         ++ +R L        I  G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP-----KKVLEEIRSLADHGFKEIILSGIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  ++E   +     A+ 
Sbjct: 265 ATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|153816459|ref|ZP_01969127.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
 gi|331087554|ref|ZP_08336485.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846201|gb|EDK23119.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
 gi|330400694|gb|EGG80298.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 483

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 26/204 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C   C YC     +  Y  G+E      + + E++ + +      +  +  G    S   
Sbjct: 200 CNNFCSYC-----IVPYVRGRERSRDPKAIIREIERLAE---DGVVEVMLLGQNVNSYGK 251

Query: 84  -----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                +    +   ++ I K   +       + ++P  +     +   ++      + L 
Sbjct: 252 TLEHPMTFAQLLREIEKIDKIERIR-----FMTSHPKDLSDELIEVMAQSKKICRHLHLP 306

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS   + L  + R +     +  +   R   P +S   D+I   P +T   +   L   
Sbjct: 307 VQSGSTRILEKMNRRYTKEHYLKLVEKLRKAIPDISLTTDIIVGFPGETEEDFRETLDVV 366

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                D    +  +   GT    M
Sbjct: 367 CKVQYDSAFTFIYSKRTGTPAAAM 390


>gi|254282405|ref|ZP_04957373.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [gamma proteobacterium
           NOR51-B]
 gi|219678608|gb|EED34957.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [gamma proteobacterium
           NOR51-B]
          Length = 454

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 14/220 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLIEPQNI 89
           C  YC F              +   + E+  + +    R +  +   G    +     ++
Sbjct: 161 CSKYCTFCVVPYTRGEEVSRPVDDVIAEIAHLAE----RGVKEVNLLGQNVNAYRGLNHL 216

Query: 90  ALILDGIA--KNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++D     +   +   +E      ++P          Y      V+ + L VQS  ++
Sbjct: 217 GEVVDFADLLRLVDLVDGIERIRYTTSHPVEFSDAIIDCYADIPALVDHLHLPVQSGSDR 276

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R I P +S   D I   P +T  ++   ++       D+
Sbjct: 277 ILMAMKRGHTALEYKSKIRALRRIRPNISMSSDFIIGFPGETDAEFAETMKLIDDIGFDN 336

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              +  +   GT    +  +       + + +    + Q 
Sbjct: 337 SFSFIYSARPGTPASDLPDNTPEATKKQRLQILQGRIAQQ 376


>gi|168204736|ref|ZP_02630741.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
           JGS1987]
 gi|170663578|gb|EDT16261.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
           JGS1987]
          Length = 434

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++         ++ +R L        I  G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP-----KKVLEEIRSLADHGFKEIILSGIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  ++E   +     A+ 
Sbjct: 265 ATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|78222387|ref|YP_384134.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78193642|gb|ABB31409.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 563

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       +    +    ++ + E++ +R   G   +        T ++ +  
Sbjct: 196 CPAACRFCSSPRFWGKSLRFRSP--RAMVDEIRAIRDRYG---LIYFSLRDDTFTVRKD- 249

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++D          ++    ++  ++V+       R+AG   +  GV+S  E+ L +
Sbjct: 250 ---RVIDFCRLLLEEKVHILWNCQSRVNAVDEEMLIWMRRAGCECVQYGVESGSEKILAY 306

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+     +   A    R     +S  LI  +P +T    +  L    +       +  L
Sbjct: 307 LGKQITPEQVRRAAKATRRAGISLSIYLISGVPGETDDDLQATLTLISNILPHDGHVAPL 366

Query: 208 TIEKGTLFY 216
               GT  +
Sbjct: 367 AYYPGTALF 375


>gi|294501590|ref|YP_003565290.1| Fe-S oxidoreductase [Bacillus megaterium QM B1551]
 gi|294351527|gb|ADE71856.1| Fe-S oxidoreductase [Bacillus megaterium QM B1551]
          Length = 320

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 66/194 (34%), Gaps = 13/194 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLVTQFNEIREKMHHKWKDGKYVAYFQAFTNTHAPVEE 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + + K   V   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 110 LREKYEAVLKLPGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTS 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  +   R    R+   +I  LP +T       ++      V  + ++
Sbjct: 167 LLINRAHDHQCYVDGVAKLRKHGIRVCSHIINGLPLETPDMMMETVREVAKLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMH 219
            L + KGT   K +
Sbjct: 227 LLHLLKGTPMVKQY 240


>gi|225374511|ref|ZP_03751732.1| hypothetical protein ROSEINA2194_00126 [Roseburia inulinivorans DSM
           16841]
 gi|225213749|gb|EEG96103.1| hypothetical protein ROSEINA2194_00126 [Roseburia inulinivorans DSM
           16841]
          Length = 312

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 67/240 (27%), Gaps = 27/240 (11%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF        +     I      ++             
Sbjct: 40  CPNRDGTLDSRGCIFCSAGGSGDF---ATAPSLSVTEQITQAKERIRRKS----NCKKFI 92

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
            +F   T +      +  +         +++   ++I      +         +    + 
Sbjct: 93  AYFQAYTNTYAPVSYLRELFTEAIAQPDIAA---LSIATRCDCLPPEVLDLLSELNCQKP 149

Query: 133 --ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I LG+QS+   +LR +       + ++A+   ++    +   LI  LP +T       
Sbjct: 150 VWIELGLQSIHNDTLRQIRSGFTYEQYLSAVDALKDRGLSVITHLILGLPGETEEMMLAS 209

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +       VD + L  L + K T    ++K     + S     D             +  
Sbjct: 210 VDAVAHLPVDGVKLQLLHVLKNTDLALLYKKAPFPVFSLEEYCDFVVTCIEHLPPEMVIH 269


>gi|117924931|ref|YP_865548.1| radical SAM protein [Magnetococcus sp. MC-1]
 gi|117608687|gb|ABK44142.1| Radical SAM domain protein [Magnetococcus sp. MC-1]
          Length = 490

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 28  CVKKCPYCDFNSH-----VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  KC YC   ++         KV ++  ++S L E++        R    IFF      
Sbjct: 193 CPYKCSYCSAGTNSRLVTPAGEKVIRKRDVRSVLDEIKAT---LARRPFKEIFFYDDF-- 247

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            I  ++    L    + +     +     A P ++     +   ++G   + +G Q+   
Sbjct: 248 FITGESW---LAEFKRLYVKEIGLPYYCLAFPPTINEKIAKDLAESGCKGVLMGFQTANT 304

Query: 143 QSLRF-LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +  +  L R    +  + A++L R+    +S D I  LP +T     + L+  +   +D 
Sbjct: 305 EYKKRVLQRPEPEARVLRAVNLLRDAGIMVSLDHILNLPGETREDIGLSLEFYVENKIDS 364

Query: 202 LSLYQLTIEKGTLFYK 217
           L ++ L     +   +
Sbjct: 365 LMVFFLNYYPDSQLTR 380


>gi|325578752|ref|ZP_08148799.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159576|gb|EGC71708.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 474

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R I+ +         P+  
Sbjct: 157 CNKYCTYC---VVPYTRGEEVSRPVDDVLFEIAQLADQ-GVREINLLGQNVNAYRGPTF- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 212 -DGGICTFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVDFVHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I    A     ++S D I   P +T  ++E  +        
Sbjct: 271 DRILTMMKRGHTALEYKSIIRKLRAVRPNIQISSDFIVGFPGETKEEFEQTMNLIAQVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFIYSARPGTPAADMP 350


>gi|302558013|ref|ZP_07310355.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces griseoflavus
           Tu4000]
 gi|302475631|gb|EFL38724.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces griseoflavus
           Tu4000]
          Length = 505

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    K   +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGKIDGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPLQSGSDPVLKAMRRSYRQERYLGIIEKVRAAIPHAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 318 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 359


>gi|253570095|ref|ZP_04847504.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840476|gb|EES68558.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 324

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 7/217 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I + L E +       P      +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPDYCRTEKSIATQLEEGKCFFAHKYPEMKYLAYFQAYTNTY---AELEG 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +     +   V   V + I   P  +    +   +   +     +  G++S  +++LR +
Sbjct: 101 LKRKYEEALQVDGVVGLVIGTRPDCMPEELLRYLEELNRHTFLMVEYGIESASDETLRRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H  ++ + A+             +I  LP +T      +     +  +  L ++QL 
Sbjct: 161 NRGHTYADTVEAVQRTAACGILTGGHVILGLPGETHDTMVEQAGILSALPLSTLKIHQLQ 220

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + +GT     +++            +  +L  +    
Sbjct: 221 LIRGTRMAHEYEENPEGFHLFTKVDEYIDLVINYVEH 257


>gi|206890169|ref|YP_002248877.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|229891018|sp|B5YKW2|MIAB_THEYD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206742107|gb|ACI21164.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 431

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 13/196 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   +   + E+  + +            G    S  +  
Sbjct: 154 CNNYCTYC---VVPYTRGKERSRPVDDIIKEISLLAEQGYK---EVTLLGQNVNSYKDGN 207

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            N  L+L+ + K   +     IT  ++P  +        +        I L +Q+   + 
Sbjct: 208 TNFPLLLEKVEKIEGIKRIRFIT--SHPKDLSKELVDVMKDYKKICEHIHLPLQAGSNKI 265

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E    I   R   P ++   D+I   P++    +E  +        D +
Sbjct: 266 LKLMNRKYTYEEYFEKICWLREAIPDIAITSDIIVGFPQEQHEDFEKTINALKEIRFDGI 325

Query: 203 SLYQLTIEKGTLFYKM 218
             ++ +   GT   K+
Sbjct: 326 FAFKFSPRLGTAAAKL 341


>gi|149907590|ref|ZP_01896337.1| tRNA-i(6)A37 modification enzyme MiaB [Moritella sp. PE36]
 gi|149809260|gb|EDM69189.1| tRNA-i(6)A37 modification enzyme MiaB [Moritella sp. PE36]
          Length = 475

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 77/239 (32%), Gaps = 11/239 (4%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    ++ +  +V     C K   YC F              +   L E+  + +  G
Sbjct: 137 DRLPEPRADGVSAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPLDDVLYEIAQLAEQ-G 192

Query: 68  PRSISSIFFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY 125
            R ++ +          +   +I    D +     +     I     +P     +  + Y
Sbjct: 193 VREVNLLGQNANAFRGDMHDGDICSFADLLRYVAAIDGIDRIRYTTSHPIEFTSDIIEVY 252

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPK 181
           +     V+ + L VQS  ++ L  + R H   E  + I   R       MS D I   P 
Sbjct: 253 KDTPELVSHLHLPVQSGSDRILTLMKRAHTTLEYKSLIRKLRKARPGLVMSSDFIIGFPG 312

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           ++   +   ++       D    +  +   GT    +  D  L    E + +    ++Q
Sbjct: 313 ESKQDFADTMKLIEDIEYDISFSFIYSARPGTPAADLPDDVSLEEKKERLKILQTRISQ 371


>gi|89901849|ref|YP_524320.1| radical SAM family protein [Rhodoferax ferrireducens T118]
 gi|89346586|gb|ABD70789.1| Radical SAM [Rhodoferax ferrireducens T118]
          Length = 530

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 23/237 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C   S + +     +  + +FL EMQ   R+           F       ++ 
Sbjct: 185 CPFKCEFC--LSSLDKTSRAFD--LDAFLDEMQGLYRRGARNFKFVDRTFN------LKV 234

Query: 87  QNIALILDGIAKNWT----VSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQS 139
            +   IL            + + + +  E  P  +  +  +        GV ++ +GVQS
Sbjct: 235 DSSVRILQFFLDRLPAPDALGNEIFVHFEVVPDHL-PDRLRVLVAKFPPGVLQLEVGVQS 293

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                 + + R  + ++  A +          +  DLI+ LP +T+  +     R     
Sbjct: 294 FSIAVQQRVSRKQDNAKTEANLRWLVAQSNAHLHADLIFGLPGETLESFATGFDRLHGLG 353

Query: 199 VDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              + L  L   +GT   +    +       P   V         ++        Y 
Sbjct: 354 PHEIQLGILKRLRGTPIVRHSTPYGMVYDPDPPYTVRQTGAVDAATLQRFARFSRYW 410


>gi|89899763|ref|YP_522234.1| radical SAM family protein [Rhodoferax ferrireducens T118]
 gi|89344500|gb|ABD68703.1| Radical SAM [Rhodoferax ferrireducens T118]
          Length = 530

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 23/237 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C   S + +     +  + +FL EMQ   R+           F       ++ 
Sbjct: 185 CPFKCEFC--LSSLDKTSRAFD--LDAFLDEMQGLYRRGARNFKFVDRTFN------LKV 234

Query: 87  QNIALILDGIAKNWT----VSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQS 139
            +   IL            + + + +  E  P  +  +  +        GV ++ +GVQS
Sbjct: 235 DSSVRILQFFLDRLPAPDALGNEIFVHFEVVPDHL-PDRLKVLIAKFPPGVLQLEVGVQS 293

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
                 + + R  + ++  A +          +  DLI+ LP +T+  +     R     
Sbjct: 294 FSIAVQQRVSRKQDNAKTEANLRWLVAQSNAHLHADLIFGLPGETLESFATGFDRLHGLG 353

Query: 199 VDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              + L  L   +GT   +    +       P   V         ++        Y 
Sbjct: 354 PHEIQLGILKRLRGTPIVRHSTPYGMVYDPDPPYTVRQTGAVDAATLQRFARFSRYW 410


>gi|257063746|ref|YP_003143418.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM
           20476]
 gi|256791399|gb|ACV22069.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM
           20476]
          Length = 409

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    HV R +     +        ++ R+      ++ I  G       E  
Sbjct: 151 CNNACTFC--IVHVARGRAWSRPYKDVVAEAGEYARRGVREIVLTGINLGAYRT---EDA 205

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQS 144
           ++  +LDG+ +     +         P ++  +       +       + L +QS   + 
Sbjct: 206 DLVRLLDGLLEAAP--NTRFRLSSVEPHTLSDDFIGLMAASDGRICRHLHLPLQSGSTKV 263

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R + A + +  +       P +S   D+I   P +T   ++     A +     +
Sbjct: 264 LKEMARPYTAQDFMGLVDRMYEAVPSLSLSTDVIVGFPGETERDFQDTCDVARACRFSKM 323

Query: 203 SLYQLTIEKGTL 214
            +++ ++  GT 
Sbjct: 324 HIFRYSMRAGTP 335


>gi|254519873|ref|ZP_05131929.1| predicted protein [Clostridium sp. 7_2_43FAA]
 gi|226913622|gb|EEH98823.1| predicted protein [Clostridium sp. 7_2_43FAA]
          Length = 434

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +   +    +  +     ++ + +L        I  G  T S  ++ 
Sbjct: 152 CNRFCTYC----IIPYSRGSVCS--KDPKKVLEEVNKLAEHGFKEIILSGIHTASYGLDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +    ++D I +   V     I I    P+       +  +K         L +QS  + 
Sbjct: 206 EGSVNLIDIIEEIEKVEGIERIRIGSIEPAFFTPEVIEKIKKFKKLCPHFHLSLQSGCDA 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + A E   +++L R   P +S   D+I   P +T  ++    +   +  +  
Sbjct: 266 TLKRMNRRYTAKEYADSVNLLRETMPDVSITTDVIVGFPGETEEEFNETYEFLKNIKLTK 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
             +++ +  KGT    M    D
Sbjct: 326 THVFKYSPRKGTKAADMQDQLD 347


>gi|281420874|ref|ZP_06251873.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205]
 gi|281405166|gb|EFB35846.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205]
          Length = 536

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 86/253 (33%), Gaps = 15/253 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   IQS + + +      G + I       G       +
Sbjct: 250 CNYYCTYC---TIPFARGNSRNPSIQSLVAQCEQAAA-EGGKEIVITGVNIGDFGQTTHE 305

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      ++E  P   + +  +     +A +    + +QS  ++ L
Sbjct: 306 RFIDLVKAMDQVEGIKRYRISSLE--PDLCDDDLIEYCAQSRAFMPHFHIPLQSGSDEVL 363

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     ++L +   P   +  D++     +T   +E   +   S  V  L 
Sbjct: 364 KLMHRRYDKALFAHKVNLIKEKMPDAFIGVDVMVGCRGETPECFEECYEFLKSLPVTQLH 423

Query: 204 LYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT   K+    D       S+ +       TQ   + +     E+       
Sbjct: 424 VFPYSERPGTAALKIPYVVDEKEKKKRSKRLLELSDQKTQEFYAQYIGTEAEVLFEKAPR 483

Query: 261 AESLH--NLNYWR 271
            +++H    NY R
Sbjct: 484 GKAMHGFTKNYIR 496


>gi|312143592|ref|YP_003995038.1| RNA modification enzyme, MiaB family [Halanaerobium sp.
           'sapolanicus']
 gi|311904243|gb|ADQ14684.1| RNA modification enzyme, MiaB family [Halanaerobium sp.
           'sapolanicus']
          Length = 442

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 67/202 (33%), Gaps = 16/202 (7%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-- 82
              C   C YC     +  Y  G+E   +     ++   +L           G    S  
Sbjct: 157 IQGCDNFCTYC-----IVPYVRGRERS-RPLEAIIKEAEKLAAEGVKEVTLLGQNVNSYG 210

Query: 83  --LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L E  +  L+L+ + K  +++      + ++P           +        I L +Q
Sbjct: 211 NDLAEEIDFPLLLEELNKVDSLARIRF--MTSHPRDFSEKLLLAIKNLEKVAKHIHLPIQ 268

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R ++    I  +   +N  P   +S D I   P ++   +E  L+    
Sbjct: 269 SGSNKILKEMNRGYSREYYIDTVKEIQNKMPEAAISTDFIVGFPGESDEDFEQTLKLVKE 328

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
              D    +  +   GT   K 
Sbjct: 329 LRFDMAYTFIYSPRSGTPAAKR 350


>gi|294055618|ref|YP_003549276.1| RNA modification enzyme, MiaB family [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614951|gb|ADE55106.1| RNA modification enzyme, MiaB family [Coraliomargarita akajimensis
           DSM 45221]
          Length = 461

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 66/195 (33%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGG---TPS 82
           C  KC YC      +     +   +   + E++ +          +  I    G    P 
Sbjct: 163 CNMKCSYC---IVPKTRGAERARPMDQIVDEIKDLAAKGTKEVTLLGQIVNQYGIREFPF 219

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           + +      +L+ + +   +          +P   + +  + Y +       +   +QS 
Sbjct: 220 VDKKSPFVQLLEKVNEIDGIERIRF--TSPHPVGFKDDLIECYARLPKLCEYLHFPMQSG 277

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R ++       I    A      +S D+I   P +T   +E+  +      
Sbjct: 278 SDRVLKAMRRPYSIERFRRIIDKLRAIRPDIYISTDVIVGFPGETDEDFELTRKHFEEVG 337

Query: 199 VDHLSLYQLTIEKGT 213
            D   L++ ++  GT
Sbjct: 338 FDMAYLFKYSVRPGT 352


>gi|297569860|ref|YP_003691204.1| MiaB-like tRNA modifying enzyme [Desulfurivibrio alkaliphilus AHT2]
 gi|296925775|gb|ADH86585.1| MiaB-like tRNA modifying enzyme [Desulfurivibrio alkaliphilus AHT2]
          Length = 470

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 70/231 (30%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGT----PS 82
           C ++C YC            +    +  L + +          + + I  G       P+
Sbjct: 171 CSQRCSYC---IVPISRGPSRSVTPERVLDQAEIYAGQGYREVVLTGIHLGHYGLDLQPT 227

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSL 140
           L     +  +L          S++E      P  V     +           + + +QS 
Sbjct: 228 LPLVGLLEKLLARRLPLRYRLSSLE------PREVSPELLELVAAEAALQPHLHIPLQSG 281

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++ L  + R +   +  A ++    + P   +  D++   P +    +   L       
Sbjct: 282 DDRILAAMNRPYRRQDFAAVVNRCAQVLPAAAIGVDVLAGFPGEDDAAFANTLALLKELP 341

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           V +L ++  +   GT   K+       +     A       Q   + +  H
Sbjct: 342 VSYLHVFPYSPRPGTPAAKLPDQVPEKVKQRRAARLRNLDRQKREAFYRRH 392


>gi|197117268|ref|YP_002137695.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197086628|gb|ACH37899.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 473

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 73/195 (37%), Gaps = 18/195 (9%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C YC     F+    R +  Q  +      E++W+++      +  I F   T + 
Sbjct: 206 CPSRCIYCLWPQTFSGRTLRKRSPQNVY-----EEVRWIKENLP--QVKEISFDDDTFTA 258

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              +  A  +    K   VS  +         + +    +  R AG++ + +G ++  EQ
Sbjct: 259 --DREHAKAIARAIKPLNVSWVINARA-----NCDYETLKELRDAGMHHVVVGYETGNEQ 311

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            L+ + +    ++AI        +   +    +  LP +T    +  +  A+   +  + 
Sbjct: 312 ILKNIKKGVTKAQAIEFTRNCHKLGLTIHGAFVLGLPGETRETIKETIAYAIDLNLTSIQ 371

Query: 204 LYQLTIEKGTLFYKM 218
           +   +   GT FY M
Sbjct: 372 VSLASPYPGTEFYDM 386


>gi|326443848|ref|ZP_08218582.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 497

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 69/222 (31%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 133 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEIEA 190

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 191 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRF--TSPHPRDFTDD 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     +  I   R   P   +S D+I
Sbjct: 249 VIAAMAETPNVMPQLHMPLQSGSDAVLRAMRRSYRQERFLGIIDKVREAIPHAAISTDII 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L         +   +Q +   GT    M
Sbjct: 309 VGFPGETEEDFEQTLHTVREARFANAFTFQYSKRPGTPAATM 350


>gi|325846562|ref|ZP_08169477.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481320|gb|EGC84361.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 450

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 17/225 (7%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++ +     N+   YV+    C   C YC     V + +  +E+   S +  ++ +  L 
Sbjct: 149 DDYVNYNSKNNFQAYVNIMTGCDNFCSYC----IVPQSRGREESRRPSHI--IEEIENLV 202

Query: 67  GPRSISSIFFGGGTPSLIEPQNIA----LILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                     G    S     +       +L+  A+   +      T  ++P  +  +  
Sbjct: 203 NNGYKEITLLGQNVNSYGNKSDFNVTFPELLEKCAQIKGLERLRFTT--SHPKDLSDDLI 260

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYA 178
           +  ++     N   L +QS  ++ L+ + R +N  + +      R   P +  S D+I  
Sbjct: 261 RVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEKARKLREEIPNIAISTDIIVG 320

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            P +T   ++  L        D    ++ +    T   K+    +
Sbjct: 321 YPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKLETIDE 365


>gi|262383720|ref|ZP_06076856.1| TIGR01212 family radical SAM protein [Bacteroides sp. 2_1_33B]
 gi|262294618|gb|EEY82550.1| TIGR01212 family radical SAM protein [Bacteroides sp. 2_1_33B]
          Length = 308

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 71/217 (32%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFSPEYCHTEKSVTEQLEEGVRFFSRKYPDMR-YLAYFQAYTNTY---DRLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           ++    +         + +   P  +  +      +  + +   I  G++S  +++L  +
Sbjct: 101 LIRKYEEALAYPGVEGLIVGTRPDCMPEDLLDYLAELSLRKFVMIEYGLESTLDKTLVRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E+ +AI             LI  LP ++  +            +  L L+QL 
Sbjct: 161 NRGHTHEESESAIRRTAAKGIYTGAHLILRLPGESRDEILHHADVLSRLPITTLKLHQLQ 220

Query: 209 IEKGTLFYK--MHKDGDLVLPSENVAVDLYNLTQSIT 243
           + K T   K       D  L + +  ++L        
Sbjct: 221 LIKNTRMAKEFKEDPSDFHLYTADEYIELVIDFIERL 257


>gi|254391805|ref|ZP_05007000.1| methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294815497|ref|ZP_06774140.1| Dimethylallyl adenosine tRNA methylthiotransferase miaB
           [Streptomyces clavuligerus ATCC 27064]
 gi|197705487|gb|EDY51299.1| methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294328096|gb|EFG09739.1| Dimethylallyl adenosine tRNA methylthiotransferase miaB
           [Streptomyces clavuligerus ATCC 27064]
          Length = 506

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 69/222 (31%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     +  I   R   P   +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPLQSGSDAVLRAMRRSYRQERFLGIIDKVREAIPHAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L         +   +Q +   GT    M
Sbjct: 318 VGFPGETEEDFEQTLHTVREARFANAFTFQYSKRPGTPAATM 359


>gi|159027937|emb|CAO87100.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 446

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q     +   EM+ + Q  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPGVRGVEQSRTPAAIRAEMEQLGQQ-GYQEITLLGQNIDAYGRDLPG 212

Query: 83  L-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +++    D +     V+    +     +P        +  ++         +  Q
Sbjct: 213 VTASGRHLHNFTDLLYYIHDVAGIERLRFATSHPRYFTERLIKACQELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R++ P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNDILKAMKRGYTQEKYRQIIANIRDLMPDAAISADAIVGFPGETEAQFENTLKLVDE 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|110679000|ref|YP_682007.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseobacter denitrificans OCh 114]
 gi|109455116|gb|ABG31321.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseobacter denitrificans OCh 114]
          Length = 554

 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 18/208 (8%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  ++     +  +  L    
Sbjct: 186 YIYIPLGTRVAIPNLARGCPFTCSFCS------QWKFWRDYRVRDPKDVVDEIEDLVDNH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         PS+ + + IA   + I +         I         + +  + YR+AG
Sbjct: 240 GVGFFILADEEPSINKKKFIAFCQELIDRGLPDRVKWGINTRVTDIYRDRDLLKFYREAG 299

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +     E   AI L R     +    I  L  +T    E 
Sbjct: 300 LVHVSLGTEAAAQMKLDIFNKETKVEENKEAIRLLREADILVEAQFIVGLDNETSETLEE 359

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             Q A  +  D  +    T    T  ++
Sbjct: 360 TFQMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|325283155|ref|YP_004255696.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Deinococcus proteolyticus MRP]
 gi|324314964|gb|ADY26079.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Deinococcus proteolyticus MRP]
          Length = 459

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 61/224 (27%), Gaps = 42/224 (18%)

Query: 24  HWP---------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--- 65
           H P                C   C YC                    L E+         
Sbjct: 129 HIPPAPQGKLQAHLTIMRGCDHHCTYC---IVPTTRGPQVSRSPDDILRELDMQLAAGVR 185

Query: 66  --------TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                        +       G PS      + ++     +    ++       ++P + 
Sbjct: 186 EVTLLGQNVNAYGVDQGARLAGYPSF--ADLLRMVGASGIERIKFTT-------SHPMNF 236

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-- 173
             +  Q   +       I L VQS  ++ LR + R +N  + +  I   R   P      
Sbjct: 237 TEDVAQAMAETPAVCEFIHLPVQSGSDRVLRRMAREYNREKYLTHIEQIRRHMPDAVLYT 296

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           D+I   P +T   ++  L        D   ++  +   GT  YK
Sbjct: 297 DIIVGFPGETEEDFQQTLDLYDEVGYDSAYMFIYSARPGTPSYK 340


>gi|4490579|emb|CAB38729.1| mg protoporphyrin IX monomethyl ester oxidative cyclase subunit
           [Rhodobacter sphaeroides]
          Length = 593

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L     + 
Sbjct: 189 EPLGVRVPIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEKLVNEHGVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
                   P++   + I            +   V+  I    + V  +    + YRKAG+
Sbjct: 243 FFILADEEPTINRKKFIE--FCEEMIARGLPDKVKWGINTRVTDVKRDKELLKFYRKAGL 300

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             ISLG ++  +  L    +    +E   AI L R          I  L  +T    E  
Sbjct: 301 VHISLGTEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEET 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            + A  +  D  +    T    T  ++
Sbjct: 361 YRMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|189426139|ref|YP_001953316.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter lovleyi SZ]
 gi|189422398|gb|ACD96796.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter lovleyi SZ]
          Length = 476

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 24/198 (12%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  KC YC     F+    R +  Q  +  ++  +  +  MR+L+               
Sbjct: 206 CPSKCIYCLWPQTFSGRQMRLRSPQNVYEEVKWIVDNIPEMRELS--------------- 250

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSL 140
              +        +       +   + I+   N   + +    +  R+AG+  + +G +S 
Sbjct: 251 --FDDDTFTASREHARNVANLLKPLGISWTINARANCDYETLKVMREAGLRHVVVGYESG 308

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            EQ L+ + +     +AI      + +   +    I  LP +T       ++ A    ++
Sbjct: 309 NEQILKNIKKGVTKEQAIQFTKDCKKLGLSVHGAFIMGLPGETKETIRETIEYAKQLDLN 368

Query: 201 HLSLYQLTIEKGTLFYKM 218
            +     +   GT FY +
Sbjct: 369 SIQASLASPYPGTEFYTL 386


>gi|291277136|ref|YP_003516908.1| hypothetical protein HMU09230 [Helicobacter mustelae 12198]
 gi|290964330|emb|CBG40180.1| conserved hypothetical protein [Helicobacter mustelae 12198]
          Length = 320

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 44/99 (44%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           +  G+QS+ ++SL+   R H ++         R+   ++   LIY LP++        L 
Sbjct: 165 LEYGIQSVFDESLKRTNRGHLSAGIPELFSRTRDHGIKVCAHLIYGLPQENEDMMLHSLD 224

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             L + +D + ++ L + K T   KM+K+      +   
Sbjct: 225 TVLDWGIDGIKIHPLYVVKDTPLAKMYKNQQYSPITLEA 263


>gi|39933328|ref|NP_945604.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris CGA009]
 gi|39652953|emb|CAE25695.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris CGA009]
          Length = 423

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + + +++ + +      + +      +G   P  
Sbjct: 154 CDHRCTFC---IIPYGRGNSRSVPVGAVVEQVRLLAERGHAEIVLTGVDLTSYGADLP-- 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  + ++      + I+   +    + +           +  + L +Q+ +
Sbjct: 209 -GAPKLGTLVKKVLRHVPELQRLRIS-SIDQVEADRDLIDALATEPRLMPHLHLSLQAGD 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H  ++A+A     R + P +    DLI   P +T   ++  L       +
Sbjct: 267 DLVLKRMKRRHCRADAVAFCEEVRLLRPDIALGADLIAGFPTETEEMFQRSLDLVEECGL 326

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   +M +
Sbjct: 327 TFLHVFPYSPRPGTPAARMPQ 347


>gi|294676226|ref|YP_003576841.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter capsulatus SB 1003]
 gi|114858|sp|P26168|BCHE_RHOCA RecName: Full=Anaerobic magnesium-protoporphyrin IX monomethyl
           ester [oxidative] cyclase; Short=Anaerobic
           Mg-protoporphyrin IX monomethyl ester oxidative cyclase
 gi|46113|emb|CAA77530.1| 575 aa (66 kD) oxidative cyclase subunit [Rhodobacter capsulatus]
 gi|294475046|gb|ADE84434.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter capsulatus SB 1003]
          Length = 575

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 68/208 (32%), Gaps = 18/208 (8%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  ++S    +  +  L    
Sbjct: 186 YIYIPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRSPKAVVDEIEDLVNNY 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++ + + +    + I +         I         + +  + YR+AG
Sbjct: 240 DVGFFILADEEPTINKKKFVEFCQEMIDRGLNHKVKWGINTRVTDIYRDRDLLKFYREAG 299

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  ISLG ++  +  L    +    +E   AI L R          I  L  +T    E 
Sbjct: 300 LVHISLGTEAAAQLKLDLFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEE 359

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             Q A  +  D  +    T    T  ++
Sbjct: 360 TFQMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|291533186|emb|CBL06299.1| SSU ribosomal protein S12P methylthiotransferase [Megamonas
           hypermegale ART12/1]
          Length = 446

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 66/220 (30%), Gaps = 15/220 (6%)

Query: 19  LGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
              Y+     C  +C YC            + N+    + +++   +    + +      
Sbjct: 148 YSAYIKIAEGCNHRCAYCA-------IPYVRGNYRSRTIEDIKQEVEALAEKGVKEFNII 200

Query: 78  GGTPSLIEPQNIAL--ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNR 132
               +           +++ + +   +     + I+ A P +                N 
Sbjct: 201 AQDTTYYGRDIYGKPSLVELLKELVKIEKVKWLRIQYAYPHTFTDELIDLIASEDKICNY 260

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +Q      L+ + R+       A +   R   P +      I   P +T +Q+   
Sbjct: 261 VDLPLQHAHNDVLKRMRRSDTKESVEALLAKLRERIPGVVIRSSFIVGFPGETDSQYTTL 320

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
                    D + ++  + E+GT  Y M    D  +  E 
Sbjct: 321 RNFVEKQRFDKVGIFSYSREEGTPAYDMPNQVDENIMQER 360


>gi|269792733|ref|YP_003317637.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100368|gb|ACZ19355.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 433

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 74/230 (32%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C   C YC        F S   R   G    ++  +        L G           G 
Sbjct: 153 CDHFCAYCIVPYVRGRFRS---RDPEGIVEEVRQLVARGVREITLLGQNVNRYGKDLPGG 209

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           P          +L+ +A+   +S     T   +P            +       I+L VQ
Sbjct: 210 P------QFPGLLEMVARVEGISRVRFAT--NHPVDFSRELVDVMVRCEKVCPSINLPVQ 261

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ +GR +   E ++ + L R+  P +    DLI   P +T   +E  L     
Sbjct: 262 SGSDRVLKLMGRGYTRDEYLSMVALLRDNLPEVGITSDLIVGFPGETPEDFEKSLSLLEE 321

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              D +     ++  GT   +M    D+   +E +        +     +
Sbjct: 322 VRFDLVHTAAYSVRPGTRAERMEGHLDVSTKAERLNRVNQLQARISLEIN 371


>gi|254490396|ref|ZP_05103585.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylophaga thiooxidans
           DMS010]
 gi|224464529|gb|EEF80789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylophaga thiooxydans
           DMS010]
          Length = 446

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 16/194 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   L E++ +    G R ++ +      + G     I+
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVGPILREIRQLAAQ-GVREVNLLGQNVNAYQGE----ID 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               A +   I     +     I     +P     +  + + +    VN + L VQS  +
Sbjct: 212 EDETADLALLIHYVAAIEGIERIRFTTSHPVEFSDSLIEAFAEVPELVNHLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A + +  I   + I P +S   D I   P +T   ++  +        D
Sbjct: 272 RILTMMKRGHTAKQYLEKIRRLKEIRPELSMSSDFIIGFPNETEADFQATMDLINEVEFD 331

Query: 201 HLSLYQLTIEKGTL 214
           H   +  +   GT 
Sbjct: 332 HSFSFIYSARPGTP 345


>gi|302554591|ref|ZP_07306933.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472209|gb|EFL35302.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces
           viridochromogenes DSM 40736]
          Length = 508

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            +       ++           + + +  + +L    K   +          +P     +
Sbjct: 200 LVADGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPLQSGSDPVLKAMRRSYRQERYLGIIEKVRAAIPHAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 318 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 359


>gi|323704598|ref|ZP_08116176.1| Radical SAM domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536060|gb|EGB25833.1| Radical SAM domain protein [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 358

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 18/195 (9%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC    +N  ++RY++ +   +Q          + T    + ++   GG    
Sbjct: 70  YCCRTCYYCGLRVYNKSIKRYRMNENEILQC--------AKATKDAGLKTVVLQGG---- 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                   I D       +  +++++I  +   +    +   +KAG +R  L +++    
Sbjct: 118 --EDKYFKIKDLCNIVEKIK-DLDLSITLSIGELTTKEYADLKKAGADRYLLRIETTNRD 174

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +    N +    +  +   + +   +    +  LP QT+     ++        D + 
Sbjct: 175 LYKKFHPNMSFDNRVRCLMDLKELGYEVGTGCLIGLPGQTLDMLAEDILFFKEIDADMIG 234

Query: 204 LYQLTIEKGTLFYKM 218
           +        T     
Sbjct: 235 MGPFIPTPNTPLENK 249


>gi|218782942|ref|YP_002434260.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764326|gb|ACL06792.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 484

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 65/209 (31%), Gaps = 8/209 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C        +   +   +Q+ + EM+++                     +   
Sbjct: 214 CPYSCFFCA---QASAFNGVRARSVQNVVDEMEYLLDRFNAPMSGLADCMYPLTHKMGMD 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++D       + + +    E      E       ++A   +I+ GV+S  E  L+ 
Sbjct: 271 FCRQLID-----RKLHTKLCWATEMRVDMAEPELLGIMKEANAIQIAYGVESGNEAMLQR 325

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+     +A  AI L +          +   P +T +     ++ A    +D       
Sbjct: 326 LGKKFKMEDARRAIALTKQAGLSTCGFFVLGFPGETPSSCRDTIRFAKELDLDFAKFNIA 385

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
               GT F+    DG +     +     +
Sbjct: 386 VPYPGTPFFDSWWDGKVEDMEYHKYNAWF 414


>gi|212637405|ref|YP_002313930.1| Radical SAM [Shewanella piezotolerans WP3]
 gi|212558889|gb|ACJ31343.1| Radical SAM [Shewanella piezotolerans WP3]
          Length = 294

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD   +    K  +   I       + ++  +    IS +F   G    +    +  
Sbjct: 31  CSFCD--MYTASQKRFRAQKIDKVEQ--ELLKVSSSQAHISRVFLADGDAMTLPFARLEE 86

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I   I K    V+      +  N ++      Q  R+ G++ + +G +S +++ L+ + +
Sbjct: 87  ICLLIKKYLPSVTRISSYCLPRNINNKTPEQLQRLRELGLSLLYIGCESGDDEVLKRINK 146

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDHLSLYQLT 208
               + ++AA+   +    + S  ++  L   ++     +   +       + LS   +T
Sbjct: 147 GETFASSLAALQKIKAAGIKSSVMILNGLGGVSLSRQHAQQSAKLMNEAQPEFLSTLVVT 206

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +  GT       DG   LP++        L  S  +                  S H  N
Sbjct: 207 LPLGTQRMDEAFDGHFQLPNQMQLFKEMQLLLSHLALD-----------KTIFRSDHASN 255

Query: 269 Y 269
           Y
Sbjct: 256 Y 256


>gi|295840590|ref|ZP_06827523.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197698831|gb|EDY45764.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 656

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 12/197 (6%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC YCDF          +   +QSF+ E++   +    R    I         I P    
Sbjct: 314 KCDYCDFVELYDGSPPYRGRSVQSFMAELEHQVRTHDVRHFELITE------SIPPAFAR 367

Query: 91  LILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
                +      ++ N    ++      +    Q   +AG   + +G+++   + L+ + 
Sbjct: 368 RFSQAVLDRGMDITWNSFAMVD---RRFDAELLQLMVRAGCEYLIIGMETTNSRVLKLVH 424

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY--AVDHLSLYQL 207
           ++ +  E +  I  A     ++  +LI  LP  T+ +    L+        V+  +++  
Sbjct: 425 KSADRQENLRFIREAHRAGMKLRINLIPDLPSTTLEEAMESLRDVAELADCVESFTVFPF 484

Query: 208 TIEKGTLFYKMHKDGDL 224
              + +   +  +   L
Sbjct: 485 EATRSSEVGRHPERFGL 501


>gi|168215652|ref|ZP_02641277.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
 gi|182382416|gb|EDT79895.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
          Length = 434

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++   +  L E++ + +      I S   G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP--KKVLDEIRSLAEHGFKEIILS---GIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  +++   +     A+ 
Sbjct: 265 ATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFKETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|256751980|ref|ZP_05492850.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|320116201|ref|YP_004186360.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|256749185|gb|EEU62219.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|319929292|gb|ADV79977.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 455

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 21/235 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGV---------YVHWP-FCVKKCPYCDFNSHVRRYKVGQENF 51
           + LS   N MT +     GV         Y+     C + C YC     +   +    + 
Sbjct: 136 QKLSVVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYC----IIPYARGPVRS- 190

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
            +     +  +++         +  G    S  +      +LD I     +     I + 
Sbjct: 191 -RDPKKVLDEVKRFADSGYKEIVLTGIHIASYGKDLKNIGLLDIIKMIHEIDGIKRIRLS 249

Query: 112 -ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              P+ +     +             + +QS  +++L+ +GR +   E  + I   R   
Sbjct: 250 SIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREYI 309

Query: 169 PRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   D++   P +T  ++    +         + +++ +  KGT  Y     
Sbjct: 310 KDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQ 364


>gi|118444753|ref|YP_878562.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
 gi|118135209|gb|ABK62253.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
          Length = 433

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 80/259 (30%), Gaps = 23/259 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-I 84
           C   C YC   F       K  +          +  +++L        I  G    S  +
Sbjct: 152 CNNFCSYCLIPFARGAVCSKNPE--------IIIDEVKKLAAHGFKEIILSGIDISSYGV 203

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           + +    +L  + K   +     + I    P     +  +   K         L +QS  
Sbjct: 204 DLEGDWNLLTILKKIDEIDGITRVRIGSIGPEFFNEDRIKEIGKLKKLCPHFHLSLQSGC 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            ++L+ + R +   E    + L R     +S   D+I   P +T+ +++   +      +
Sbjct: 264 NETLKRMNRKYTTEEFENVVKLLRKYIKDISITTDIIVGFPGETIEEFDETYEYLKRIEL 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-------DLYNLTQSITSAHGLHAYE 252
             + +++ +   GT   KM    D  +  E           +                YE
Sbjct: 324 SKMHIFKYSPRTGTRAEKMENQVDGNIKEERSKALIKLNEINEKKFIDKFIGEDMEVLYE 383

Query: 253 ISNHSFLGAESLHNLNYWR 271
              ++  G    +  NY +
Sbjct: 384 QQCNNKEGYYEGYTPNYIK 402


>gi|326389860|ref|ZP_08211424.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994128|gb|EGD52556.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
           200]
          Length = 455

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 21/235 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGV---------YVHWP-FCVKKCPYCDFNSHVRRYKVGQENF 51
           + LS   N MT +     GV         Y+     C + C YC     +   +    + 
Sbjct: 136 QKLSVVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYC----IIPYARGPVRS- 190

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
            +     +  +++         +  G    S  +      +LD I     +     I + 
Sbjct: 191 -RDPKKVLDEVKRFADSGYKEIVLTGIHIASYGKDLKNIGLLDIIKMIHEIDGIKRIRLS 249

Query: 112 -ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              P+ +     +             + +QS  +++L+ +GR +   E  + I   R   
Sbjct: 250 SIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREYI 309

Query: 169 PRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   D++   P +T  ++    +         + +++ +  KGT  Y     
Sbjct: 310 KDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQ 364


>gi|167037786|ref|YP_001665364.1| MiaB-like tRNA modifying protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|166856620|gb|ABY95028.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
          Length = 467

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 21/235 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGV---------YVHWP-FCVKKCPYCDFNSHVRRYKVGQENF 51
           + LS   N MT +     GV         Y+     C + C YC     +   +    + 
Sbjct: 148 QKLSVVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYC----IIPYARGPVRS- 202

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
            +     +  +++         +  G    S  +      +LD I     +     I + 
Sbjct: 203 -RDPKKVLDEVKRFADSGYKEIVLTGIHIASYGKDLKNIGLLDIIKMIHEIDGIKRIRLS 261

Query: 112 -ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              P+ +     +             + +QS  +++L+ +GR +   E  + I   R   
Sbjct: 262 SIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREYI 321

Query: 169 PRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   D++   P +T  ++    +         + +++ +  KGT  Y     
Sbjct: 322 KDVAITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQ 376


>gi|239904938|ref|YP_002951676.1| hypothetical protein DMR_02990 [Desulfovibrio magneticus RS-1]
 gi|239794801|dbj|BAH73790.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 490

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 14/189 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  +      +  +   I   L E+ W              F G      E  
Sbjct: 220 CPFRCSFC-LHPQTLTGRTARCRSIDKVLDEVAWCLD----------HFPGLRTIFFEDD 268

Query: 88  NIALILDGIAKNWT--VSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +              +   +     AN    ++ +     R+AG  ++ +G +S +  +
Sbjct: 269 TLTADKVRCRAFCQAIIRRGLVFEWTANARADLDPDLMGLMRRAGCRQLCVGFESADPTA 328

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + +   A         A     ++    I+  P  T       +  AL    +    
Sbjct: 329 LSAMKKGLGAERMRCFRADAAAAGIKIHGCFIFGFPGDTRESILATIDFALDLNPETAQF 388

Query: 205 YQLTIEKGT 213
           Y + +  GT
Sbjct: 389 YPVMVYPGT 397


>gi|150008804|ref|YP_001303547.1| hypothetical protein BDI_2194 [Parabacteroides distasonis ATCC
           8503]
 gi|298375924|ref|ZP_06985880.1| radical SAM protein, family [Bacteroides sp. 3_1_19]
 gi|149937228|gb|ABR43925.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|298266961|gb|EFI08618.1| radical SAM protein, family [Bacteroides sp. 3_1_19]
          Length = 308

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFSPEYCHTEKSVTEQLEEGVRFFSRKYPDMR-YLAYFQAYTNTY---DRLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           ++    +         + +   P  +     + F    +     I  G++S  +++L  +
Sbjct: 101 LILKYEEALAYPGVEGLIVGTRPDCMPEGLLDYFAELSQRKFVMIEYGLESTLDKTLVRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E+ +AI             LI  LP ++  +            +  L L+QL 
Sbjct: 161 NRGHTHEESESAIRRTAAKGIYTGAHLILGLPGESRDETLHHADVLSRLPITTLKLHQLQ 220

Query: 209 IEKGTLFYK--MHKDGDLVLPSENVAVDLYNLTQSIT 243
           + K T   K       D  L + +  ++L        
Sbjct: 221 LIKNTRMAKEFKEDPSDFHLYTADEYIELVIDFIERL 257


>gi|261414864|ref|YP_003248547.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371320|gb|ACX74065.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302326764|gb|ADL25965.1| tRNA-i(6)A37 modification enzyme MiaB [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 440

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K+C YC     +  Y  G E +       +  +++         +  G    +   P 
Sbjct: 159 CNKRCSYC-----IVPYLRGPEKYRD-MDDVLTEVKRAADKGITEVMLLGQTVNAYKTPN 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +   +L  +++   +          +P                  +   + +QS  +  
Sbjct: 213 ADFTTLLTKVSEIGGIKRIRF--TSPHPRHYTNELIDVLLNNPKVCHYAHIPLQSGSDAI 270

Query: 145 LRFLGRNHNASEAIAAIHLAR--NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R HN  + +  I   R  + +  +S D+I     +T   +E  ++   +   D  
Sbjct: 271 LKKMRRQHNMEQYMTVIEQLRSKDPYYAISTDVICGFVGETDEDFEQTIKAFEACQFDTA 330

Query: 203 SLYQLTIEKGTLFYK 217
            ++  +  KGT  + 
Sbjct: 331 YMFIYSPRKGTESFN 345


>gi|269961847|ref|ZP_06176204.1| hypothetical protein VME_25880 [Vibrio harveyi 1DA3]
 gi|269833425|gb|EEZ87527.1| hypothetical protein VME_25880 [Vibrio harveyi 1DA3]
          Length = 290

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 80/224 (35%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     +   K  +   I+  + +++   +L  P   S     G     +  +   L
Sbjct: 30  CTFCS----MFDDKRFKVRPIEDVIKDIE-EARLIYPHVESIFLIDGNV---MAARTDYL 81

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +        T     +I++ +  +      +   +  + AG++    G++S +   L  +
Sbjct: 82  LKIFDKLRSTFPECKKISLYSGLNDFRRKTIAELKELKDAGLDMAYSGLESGDRVVLERI 141

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQ 206
            +  +  +AI  + +A+     +    I+ L    ++                + ++   
Sbjct: 142 KKRMSPEQAIEGMAMAKEAGIEVLLSFIFGLGGRERSKEHIIATTDILNQINPEQIAPMA 201

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L I+ GT+  +  K+G+ ++P++   ++         +    + 
Sbjct: 202 LAIQPGTVMEQEVKNGEFIMPTQLQVLEEEKYLLENLNIDTFYW 245


>gi|209883674|ref|YP_002287531.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oligotropha
           carboxidovorans OM5]
 gi|229890581|sp|B6JCT6|MIAB_OLICO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|209871870|gb|ACI91666.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oligotropha
           carboxidovorans OM5]
          Length = 475

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 30/208 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C K C +C     V  Y  G E  +   + ++    +      +  +   G         
Sbjct: 168 CDKFCTFC-----VVPYTRGME--VSRPVADIVADAKRLAENGVRELTLIGQNVNAYHGD 220

Query: 79  ---GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
              G  S +       +L  +A    ++     T  ++P  V+ +  + +R     +  +
Sbjct: 221 DENGRTSSL-----GRLLHRLAMLPGIARLRYST--SHPRDVDDSLIEAHRDIPAVMPFV 273

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMEL 191
            L VQS  ++ L  + R H A++ I  I   R + P +  S D I   P ++   +   L
Sbjct: 274 HLPVQSGSDRILAAMNRKHTAADYIRTIERFRKVRPEIAFSSDFIVGFPGESEQDFADTL 333

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMH 219
                        ++ +   GT    M 
Sbjct: 334 ALVTQIGYAGAYSFKYSPRPGTPAADMQ 361


>gi|256841159|ref|ZP_05546666.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256737002|gb|EEU50329.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 308

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 71/217 (32%), Gaps = 9/217 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+  +    Y   +++  +     +++  +          +F   T +      +  
Sbjct: 45  CTYCNNQTFSPEYCHTEKSVTEQLEEGVRFFSRKYPDMR-YLAYFQAYTNTY---DRLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           ++    +         + +   P  +       + +  + +   I  G++S  +++L  +
Sbjct: 101 LILKYEEALAYPGVEGLIVGTRPDCMPEGLLDYFAELSLRKFVMIEYGLESTLDKTLVRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H   E+ +AI             LI  LP ++  +            +  L L+QL 
Sbjct: 161 NRGHTHEESESAIRRTAAKGIYTGAHLILGLPGESRDEILHHADVLSRLPITTLKLHQLQ 220

Query: 209 IEKGTLFYK--MHKDGDLVLPSENVAVDLYNLTQSIT 243
           + K T   K       D  L + +  ++L        
Sbjct: 221 LIKNTRMAKEFKEDPSDFHLYTADEYIELVIDFIERL 257


>gi|290956967|ref|YP_003488149.1| radical SAM protein [Streptomyces scabiei 87.22]
 gi|260646493|emb|CBG69590.1| putative Radical SAM protein [Streptomyces scabiei 87.22]
          Length = 483

 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 119 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 176

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    K   +          +P     +
Sbjct: 177 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 234

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      ++ D+I
Sbjct: 235 VIAAMAETPNVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRASIPHAAITTDII 294

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +             +Q +   GT    M
Sbjct: 295 VGFPGETEEDFEQTMHVVREARFTQAFTFQYSKRPGTPAATM 336


>gi|325954192|ref|YP_004237852.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB [Weeksella
           virosa DSM 16922]
 gi|323436810|gb|ADX67274.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Weeksella
           virosa DSM 16922]
          Length = 482

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 90/268 (33%), Gaps = 35/268 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTG------PRSISSIFFGGG 79
           C   C +C     V  +  G+E      S L E+Q + +          +++ S  + GG
Sbjct: 181 CDNMCTFC-----VVPFTRGRERSRDPHSILREIQELHEAGYKEVTLLGQNVDSYLWYGG 235

Query: 80  TP-------------SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
            P             + ++   +  ++     +  +  +      +NP  ++ N  +   
Sbjct: 236 GPKKDFKNATEIQKATAVDFAQLLDMVAMQFPSIRIRFST-----SNPQDMKDNVLETMA 290

Query: 127 KAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQ 182
           K       I L VQS     L  + R H   +    I   R I P   +S D+I     +
Sbjct: 291 KHHNICKYIHLPVQSGSTTVLERMNRQHTREQYFELIDKIRKIIPDCALSHDMIAGFCGE 350

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           T  + +  L        D   ++  +   GT  +K   D       +    ++ +L Q  
Sbjct: 351 TEEEHQDTLSLMEYVKYDFGYMFAYSDRPGTPAHKKMADDVPAETKKRRLQEIISLQQQH 410

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYW 270
           ++         ++   +   S  + NYW
Sbjct: 411 SAERMKAYVGKTHEVLIEGNSKKDENYW 438


>gi|257062972|ref|YP_003142644.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256790625|gb|ACV21295.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 293

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 69/229 (30%), Gaps = 9/229 (3%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C F    R      E        ++  +      R    I+  G    ++  
Sbjct: 25  CSHNRCKFCTFYKDARFAVSPWEE----IEADLDELAASPW-RYYDRIWLQGADSFVLPY 79

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  + + I +    V S        N  +      +    AG +R+++GV++ ++Q L
Sbjct: 80  DRLMRVAETIYEKLPWVKSIGAFARVTNFRNKTEEQLRNLAAAGYSRLTVGVETGDDQLL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLS 203
             + + + + E +  +              +  L          E   +         + 
Sbjct: 140 TRMNKGYVSDEVLEQMSKVDAAGLTWVGQFVNGLGGHGYGSRSAEETARVYNQLHPMMIY 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              LT+ + T  Y   + G  V  +E   +       S      +   E
Sbjct: 200 TASLTLFEDTPLYADVQAGSFVEANERERLRELKALISRLECDTVFKCE 248


>gi|228475905|ref|ZP_04060615.1| radical SAM protein [Staphylococcus hominis SK119]
 gi|228270060|gb|EEK11530.1| radical SAM protein [Staphylococcus hominis SK119]
          Length = 319

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 75/222 (33%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I+    +++              +F   T +    + +  
Sbjct: 52  CTFCS-AAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGKYIAYFQAFTNTHAPVEVLKE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + K   V   + ++I   P  +  +  +   +        + LG+Q++ +++   +
Sbjct: 111 KYEPVLKEEGV---IGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHQKTSDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R     +   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYHMMMETAREVAQMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   +++   +L      I     +  
Sbjct: 228 LLKGTPMVKQYEKGMLEFMTQDDYTNLVCDQLEILPPDMIIH 269


>gi|14917063|sp|O59545|Y1875_PYRHO RecName: Full=Putative methylthiotransferase PH1875
          Length = 425

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+  C YC   + + R  +     E  I      ++   +     +  +  +G    +  
Sbjct: 148 CLNACTYCA--TRLARGVLKSYSPEKIIGWVKWAIKQGYKEIWLSAEDTGCYGFDIGT-- 203

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGVQS 139
              N+A ++D I     +     I +   NP+            Y+   V   + L VQS
Sbjct: 204 ---NLAKLIDEITA---IEGEFRIRVGMMNPNHVLKFLDELIDAYKDEKVYKFLHLPVQS 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            + + LR +GR +   E    +   R  FP ++   D+I   P ++   ++  ++     
Sbjct: 258 GDNEILRKMGRMYTVEEFEEIVKAFRREFPELNLHTDIIVGFPGESEEAFQRSVELIKRI 317

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D +++ + +   GT+  K 
Sbjct: 318 RPDKVNVSRYSPRPGTIAAKW 338


>gi|319403640|emb|CBI77225.1| bifunctional enzyme [Bartonella rochalimae ATCC BAA-1498]
          Length = 460

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  I   + ++           +  I   G   +    Q
Sbjct: 176 CDKFCTFC-----VVPYTRGAE--ISRSVKQITAEAYQLIEAGVKEITLLGQNVNAWHGQ 228

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
           +I      + D +     +     +     +P  ++ +    +R   +    + L VQS 
Sbjct: 229 SIDGKTWRLGDLLHHLAKIDGLKRLRYTTSHPRDMDDSLIAAHRDLDILMPYLHLPVQSG 288

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H +   +  I   R   P ++F  D I   P +T   +E  ++      
Sbjct: 289 SDRILKAMNRQHKSIHYLNLIDKIRAARPDIAFSGDFIVGFPGETDEDFEETIKLIQQVG 348

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT+   M    D
Sbjct: 349 YSSAYSFKYSPRPGTVGATMKNHVD 373


>gi|313672559|ref|YP_004050670.1| radical sam domain protein [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939315|gb|ADR18507.1| Radical SAM domain protein [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 387

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 67/194 (34%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEM-------QWMRQLTGPRSISSIFFGG 78
           C   C YC       +   G+  +  I   L ++       +   +   P S S  +  G
Sbjct: 154 CTFSCKYC----QTPQLYKGKLRYKSIDRILDDVSFGISHNKTDLRFIAPDSASYFYDNG 209

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGV 137
               ++  + +   L  +  N           E NP  V     +  +    NR + +G+
Sbjct: 210 IN--ILMIEKLLDKLHNLLYNKGRIFYGSFPSEINPYFVNEEFVKLIKHYCHNRRVVIGL 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS   + L+ + R  N  +   AI+L       +  D I+ LP +T    +  ++    +
Sbjct: 268 QSASRKLLKKMNRPENIEKVEEAINLFLKYKFTVDVDFIFGLPFETSETLKETIEWIEKW 327

Query: 198 AVDHLSLYQLTIEK 211
             + + ++      
Sbjct: 328 H-NKVRIHSHYFMP 340


>gi|292493861|ref|YP_003529300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus
           Nc4]
 gi|291582456|gb|ADE16913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus
           Nc4]
          Length = 447

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 12/202 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLIEPQ 87
           C  YC F              +   + E+  + +  G R ++ +         P  +   
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPLDDVIAEIVDLAEQ-GVREVTLLGQNVNAYRGP--MGEG 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +IA +   I    ++     I     +P     +  Q + +    V+ + L VQS  ++ 
Sbjct: 214 DIADLALLITYVASIEGIERIRFTTSHPVEFSDSLIQAFAEVPELVSHLHLPVQSGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E  A +   R + P +S   D I  LP +T   ++  L        DH 
Sbjct: 274 LSLMKRGHTVLEYKAKLRRLRQVRPDISISSDFIIGLPGETEADFQATLALVDEVGFDHS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
             +  +   GT    +  +  +
Sbjct: 334 FSFIYSPRPGTPAASLPDEVPM 355


>gi|313206813|ref|YP_004045990.1| tRNA-i(6)a37 thiotransferase enzyme miab [Riemerella anatipestifer
           DSM 15868]
 gi|312446129|gb|ADQ82484.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Riemerella anatipestifer
           DSM 15868]
 gi|315023886|gb|EFT36888.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Riemerella
           anatipestifer RA-YM]
 gi|325335747|gb|ADZ12021.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-GD]
          Length = 477

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 84/256 (32%), Gaps = 30/256 (11%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTP--- 81
           C   C +C   F     R +       +         +++    +++ S  + GG P   
Sbjct: 179 CDNMCTFCVVPFTRGRERSRDPHSIIKECQELWENGYKEITLLGQNVDSYLWYGGGPKKD 238

Query: 82  ----SLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
               + +      + + +L+ +AK          T  +NP  + +  F+   +       
Sbjct: 239 FDKATEMQKATAVDFSQLLEMVAKAVPEMRIRFST--SNPQDMSLEVFRKMAQYPNICKY 296

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L VQ+   + L  + R H   E +  I  AR I P ++F  D+I     +T    +  
Sbjct: 297 VHLPVQTGSNKMLELMNRQHTREEYLELIREARKIVPDVAFSQDMIVGFCNETEEDHQDT 356

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L        D+  ++  +   GT  +K  +D                + +          
Sbjct: 357 LSLMREVEYDYGYMFAYSERPGTPAHKKMEDN-----------VPAEVKKRRLQEVIDLQ 405

Query: 251 YEISNHSFLGAESLHN 266
            E+S     G    H+
Sbjct: 406 GELSRKRMKGYVGRHH 421


>gi|218782941|ref|YP_002434259.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764325|gb|ACL06791.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 479

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 65/184 (35%), Gaps = 10/184 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C+F S     +  ++  ++    E+ W +++   R +  +      P+         + +
Sbjct: 216 CNFCSL---SRDLRQKSVERVREEVAWAKRIFKAREVHFV-----DPTF--TAGRKRLFE 265

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
             A        +  + ++    ++    +    AG + +SLG++S  ++ L  + +    
Sbjct: 266 LTAMIKKDFPGLAWSCKSRVDLLDYEAARRMAGAGCHIVSLGMESGSQKMLNAMNKAVTV 325

Query: 155 SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +++ A+   +    R    +++  P +T       +        D+     L  +  + 
Sbjct: 326 EQSVRAVRALKKAGVRSLVYIMFGAPGETDQTVRQTMDLLERIRPDYALFAGLMPDPLSA 385

Query: 215 FYKM 218
             + 
Sbjct: 386 LLRR 389


>gi|163848866|ref|YP_001636910.1| radical SAM domain-containing protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526822|ref|YP_002571293.1| Radical SAM domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163670155|gb|ABY36521.1| Radical SAM domain protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450701|gb|ACM54967.1| Radical SAM domain protein [Chloroflexus sp. Y-400-fl]
          Length = 392

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 17/224 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEPQ-N 88
           +C +C F     R +  + +   SF   +Q ++   G    +    F G   +LI PQ  
Sbjct: 151 RCHFCTFY----RDRAFRIHTPASFREHIQQVKTFVGAGLGLRKAIFLGDANALIIPQPR 206

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNN-----FQGYRKAGVNRISLGVQSLEE 142
           +  +L  + + +T+  + +   I A              ++    AGV R+ LG++S +E
Sbjct: 207 LRDLLQVVHEEFTIGPDADFKGIYAFLDIFGAERKTLADYRELAAAGVRRVYLGLESGDE 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAV- 199
              R L +  + +EAI A+   +     +   L+     + +     +  L    +    
Sbjct: 267 TVFRLLNKPGSPAEAIEAVRTIKAAGIAVGIILLVGAGGERLAADHVQHSLATIAAMHPG 326

Query: 200 --DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             D + L  L I   T +    +  D    SE          + 
Sbjct: 327 PEDIIYLSPLMIPPDTPYLAQMQAIDSPPLSEAALAAQLEQLKQ 370


>gi|288574139|ref|ZP_06392496.1| Radical SAM domain protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569880|gb|EFC91437.1| Radical SAM domain protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 299

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 66/213 (30%), Gaps = 27/213 (12%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------- 73
           C  +       C +CD          G   +++     ++   +     ++         
Sbjct: 29  CPNRNGLGEGGCVFCD------SSGGGNGAWMRG--ESLELQVRKGMKSAVEHYKAKGCI 80

Query: 74  IFFGGGTPSLIEPQNIALILDGIA-KNWTVSSNVEITIEANPSSVEVN---NFQGYRKAG 129
           ++F   + +      +   ++    +         + +   P  V            ++ 
Sbjct: 81  LYFQSYSSTYGPLDRLKEAIEKARVEASRHLPVWGLAVGTRPDLVSGEVVSYLSSLCRSD 140

Query: 130 VNRI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
                 LGVQ+ +E  L++L R H+ +     +         +S  LI  +P +   Q  
Sbjct: 141 FEVWLELGVQTTDEDGLKWLRRGHDLTCVEDTLDRCLGESFSVSAHLIAGIPGEREDQLL 200

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
              +  L   +  L  + L + + T    ++ +
Sbjct: 201 RSARWLLDRGITGLKFHPLYVLRDTPLEDLYMN 233


>gi|110803412|ref|YP_699306.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
 gi|110683913|gb|ABG87283.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
          Length = 434

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++   +  L E++ + +      I S   G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP--KKVLDEIRSLAEHGFKEIILS---GIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  +++   +     A+ 
Sbjct: 265 ATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFKETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|91203104|emb|CAJ72743.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 477

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC +   +  ++    + + + + E+ + ++      +  IFF   T +     
Sbjct: 207 CPSQCIYCLWPQTMMGHQYRVRS-VDNVIRELMYCKERFP--EVKEIFFDDDTFT----A 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +   K   +      T  AN   ++    Q  ++ G+  + +G +S  ++ L+ 
Sbjct: 260 NRKRVQEFSRKVKDLGITWSATSRAN---LDRETLQQMKEGGLRLLVVGYESGNDEILKN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     +A       +++  ++    +  LP +  +  E  ++ A+    D + +   
Sbjct: 317 VKKGITIDQAKRFTGECKSLGIQIHGTFMLGLPGENRSSMEDTIRFAIEMDPDTMQVSIA 376

Query: 208 TIEKGTLFY 216
           +   GT FY
Sbjct: 377 SPYPGTEFY 385


>gi|52080307|ref|YP_079098.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52785683|ref|YP_091512.1| YmcB [Bacillus licheniformis ATCC 14580]
 gi|319645912|ref|ZP_08000142.1| hypothetical protein HMPREF1012_01176 [Bacillus sp. BT1B_CT2]
 gi|81385531|sp|Q65JE5|MIAB_BACLD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|52003518|gb|AAU23460.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|52348185|gb|AAU40819.1| YmcB [Bacillus licheniformis ATCC 14580]
 gi|317391662|gb|EFV72459.1| hypothetical protein HMPREF1012_01176 [Bacillus sp. BT1B_CT2]
          Length = 509

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRRLAAEGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +E   +  ++D + K   +         ++P   + +  +   K G  ++ I L VQS
Sbjct: 275 EDME-YGLGHLMDELRK---IDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L      
Sbjct: 331 GSSDVLKLMARKYDRERYLELVAKIKKAMPNASLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  +    +   +   N   +  SA  +  YE
Sbjct: 391 EFDSAYTFIYSPREGTPAAKMKDNVPMR--VKKERLQRLNEVVNEISAKKMKEYE 443


>gi|332140833|ref|YP_004426571.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|229890437|sp|B4S0R8|MIAB_ALTMD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|327550855|gb|AEA97573.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 477

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 71/229 (31%), Gaps = 18/229 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F              +   L E+  +      + +  +   G   +    +N  
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVDDVLLEIAQLA----GQGVREVNLLGQNVNAYRGENYD 212

Query: 91  -------LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                   +L+ +A    +      T  ++P     +    Y      V+ + L VQS  
Sbjct: 213 GTICRFSELLELVAAIDGIDRIRYTT--SHPVEFTDDIIDAYASIPELVDHLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + +   + I P +S   D I   P +T   +E  +    +   
Sbjct: 271 DRILNLMKRGHTALEYKSKMRKLKKIRPNISLSSDFIIGFPGETDADFEATMDLIQAVDY 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           D    +  +   GT       D       + + +    +TQ        
Sbjct: 331 DLSFSFIYSARPGTPAADAVDDVTEETKKQRLHLLQQRITQQALRIARH 379


>gi|238650895|ref|YP_002916751.1| tRNA 2-methylthioadenosine synthase-like protein [Rickettsia
           peacockii str. Rustic]
 gi|238624993|gb|ACR47699.1| tRNA 2-methylthioadenosine synthase-like protein [Rickettsia
           peacockii str. Rustic]
          Length = 421

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 148 CDHFCTFC-----IIPYGRGKSRSVA--IGAIAEQVKHLVLNGFKEVVFTGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ +     +  +     E +    E      Y +  +    + 
Sbjct: 201 LPGSPTF--AQMIKRVLNLVPALKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 LQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 316 SEAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAAILRQEGQNQLTEFFKKHI 370


>gi|153853169|ref|ZP_01994578.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814]
 gi|149753955|gb|EDM63886.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814]
          Length = 481

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 70/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E         +  +RQL     +  +  G    S    +
Sbjct: 199 CNNFCSYC-----IVPYVRGRERSRDP-EAIISEIRQLVADGVVEVMLLGQNVNSYGKNL 252

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L+ I +   +       + ++P  +     +   K+      + L VQS  
Sbjct: 253 EHPITFAQLLERIEQIEGLERIRF--MTSHPKDLSDELIEVMGKSKKICKHLHLPVQSGS 310

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++   + +  +   R   P +S   D+I   P +T   +E  +        
Sbjct: 311 SKILKKMNRHYTKEQYLELVEKIRRSVPDVSLTTDIIVGFPGETEEDFEETMDIVRKVRY 370

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 371 DSAFTFIYSKRTGTPAAVM 389


>gi|150402967|ref|YP_001330261.1| radical SAM domain-containing protein [Methanococcus maripaludis
           C7]
 gi|150033997|gb|ABR66110.1| Radical SAM domain protein [Methanococcus maripaludis C7]
          Length = 369

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 64/172 (37%), Gaps = 16/172 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TP 81
           C   C +C     F  ++R          +S  + ++ ++ +   R ++   F  G  T 
Sbjct: 144 CPYNCRFCQTPQIFGKNIRH---------RSIESIVKIVKTMGDIRFVTPNAFSYGSKTG 194

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSL 140
           +  + + +  ++  + +            E  P  V         K   NR I  G QS 
Sbjct: 195 TKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVTFETLDLVNKYCDNRYIHFGAQSG 254

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            ++ L+ + R H  S+ I A+  +++       D I+  P +T  Q +  + 
Sbjct: 255 SDEVLKNIRRGHLVSDVINAVETSKDCDLIPKVDFIFGFPNETENQRKETID 306


>gi|110801313|ref|YP_696705.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
           13124]
 gi|110675960|gb|ABG84947.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
           13124]
          Length = 434

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++   +  L E++ + +      I S   G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP--KKVLDEIRSLAEHGFKEIILS---GIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  ++E   +     A+ 
Sbjct: 265 ATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|313888926|ref|ZP_07822586.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845099|gb|EFR32500.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 432

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 69/200 (34%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I+  + E + +        + +    G     +   
Sbjct: 154 CNRFCTYC---IIPFARGPIRSRTIEDSVREARTLADRGFKEIVLTGIHIGSFGMDLGDM 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ IA+   +      ++E  P  +  +  +   K G   +   L +QS     L
Sbjct: 211 RLIDLIEAIAEVDGIERIRLSSVE--PIIITDDFMERAVKTGKLCDHFHLSLQSGSNNIL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   + I   ++ RN  P      D+I   P ++   +E  ++         + 
Sbjct: 269 KAMNRRYTREDYIEKANIIRNYMPHAGLTADIIVGFPGESQEDFEDSMKIVKEVGFSRIH 328

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           +++ +  K T    M    D
Sbjct: 329 VFKYSKRKNTKAAVMKNQID 348


>gi|314936144|ref|ZP_07843491.1| radical SAM protein, family [Staphylococcus hominis subsp. hominis
           C80]
 gi|313654763|gb|EFS18508.1| radical SAM protein, family [Staphylococcus hominis subsp. hominis
           C80]
          Length = 319

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 74/222 (33%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I+    +++              +F   T +    + +  
Sbjct: 52  CTFCS-AAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGKYIAYFQAFTNTHAPVEVLKE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + K   V   + ++I   P  +  +  +   +        + LG+Q++ +++   +
Sbjct: 111 KYEPVLKEEGV---IGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHQKTSDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R     +   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGENYHMMMETAREVAQMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   ++    +L      I     +  
Sbjct: 228 LLKGTPMVKQYEKGMLEFMTQEDYTNLVCDQLEILPPDMIIH 269


>gi|309789580|ref|ZP_07684161.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides
           DG6]
 gi|308228316|gb|EFO81963.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides
           DG6]
          Length = 450

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 21/232 (9%)

Query: 23  VHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--- 76
           VH P    C  +C YC      +R    +   +   + E+  +        +        
Sbjct: 158 VHVPIQYGCNMRCSYC---VIPQRRGRERSRSLDEIVAEVTRIVDHGAREIVLLGQIVDS 214

Query: 77  -GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
            G   P       +A ++  +     +       + ++P+ +  +  +        +  I
Sbjct: 215 WGHDLP---GRPQLADLIRAVHAIPGLLRLRF--LTSHPAWMTDHLIETVASLPRCMPEI 269

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
           +L VQ+  ++ L  + R +  +     I   R   P +S   D+I   P ++   +   L
Sbjct: 270 NLPVQAGSDRVLALMQRGYTTARYRDLIARIRAAIPHISLTTDIIVGHPGESEADFAQTL 329

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                   D + +   +   GT+  +   + D  L           +     
Sbjct: 330 ALCEEIRFDKIHIAAFSARPGTVAAEQ--EADPSLAVSEEQKQARRIAMEQL 379


>gi|224542096|ref|ZP_03682635.1| hypothetical protein CATMIT_01271 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525029|gb|EEF94134.1| hypothetical protein CATMIT_01271 [Catenibacterium mitsuokai DSM
           15897]
          Length = 483

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 78/219 (35%), Gaps = 21/219 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C K C YC     +  Y  G+E   +     ++ + +L           G    S    L
Sbjct: 199 CNKFCTYC-----IVPYTRGKERS-RELEEIIKEVEELKNSGYKEITLLGQNVNSYGKDL 252

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               + A +L+ +AK      +      ++P     +      K    +  I L VQS  
Sbjct: 253 NNGTDFATLLEAVAKTGI---DRIRFTTSHPWDFNADMIDIIAKYDNIMPSIHLPVQSGN 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ +GR ++    +    + +   P   ++ D+I   P +T  Q++  L        
Sbjct: 310 DDVLQLMGRRYSKESYLKLFDMIKEKIPDCTVTTDIIVGFPNETEEQFQDTLSLYNYCKY 369

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           D    +  +  +GT   KM    +  +P  +    LY L
Sbjct: 370 DLAYTFIYSPREGTPAAKM----EDNVPLSDKEQRLYRL 404


>gi|83645719|ref|YP_434154.1| Fe-S oxidoreductase [Hahella chejuensis KCTC 2396]
 gi|83633762|gb|ABC29729.1| Fe-S oxidoreductase [Hahella chejuensis KCTC 2396]
          Length = 563

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 12/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C F      YK    + ++    E+  +  L    +++ +      P     +
Sbjct: 254 CPYSCAFCGFPQRAGAYKTLAPDLVE---QELDRIAALGNVDTLTFLDDTFNVP----KK 306

Query: 88  NIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
               IL  +  K +    N            +    Q  R+AG   + LG++S  +  L+
Sbjct: 307 RFKEILRLMIRKQYGFRWNSFY----RSDQGDYETIQLMREAGCEGVFLGIESGSDAMLK 362

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +         AI   +         LI   P +T                D      
Sbjct: 363 NMNKTARRRNFAEAIPQLQAAGISAHASLIVGFPGETEDTIRETQSLIEQSKPDFYRAQL 422

Query: 207 LTIEKGTLFYKMHKDGDL 224
              +  T  +K  ++ DL
Sbjct: 423 WYCDPLTPIWKNRQEYDL 440


>gi|14591622|ref|NP_143704.1| hypothetical protein PH1875 [Pyrococcus horikoshii OT3]
 gi|3258314|dbj|BAA30997.1| 432aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 432

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 75/201 (37%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+  C YC   + + R  +     E  I      ++   +     +  +  +G    +  
Sbjct: 155 CLNACTYCA--TRLARGVLKSYSPEKIIGWVKWAIKQGYKEIWLSAEDTGCYGFDIGT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGVQS 139
              N+A ++D I     +     I +   NP+            Y+   V   + L VQS
Sbjct: 211 ---NLAKLIDEITA---IEGEFRIRVGMMNPNHVLKFLDELIDAYKDEKVYKFLHLPVQS 264

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            + + LR +GR +   E    +   R  FP ++   D+I   P ++   ++  ++     
Sbjct: 265 GDNEILRKMGRMYTVEEFEEIVKAFRREFPELNLHTDIIVGFPGESEEAFQRSVELIKRI 324

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D +++ + +   GT+  K 
Sbjct: 325 RPDKVNVSRYSPRPGTIAAKW 345


>gi|212696093|ref|ZP_03304221.1| hypothetical protein ANHYDRO_00629 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676722|gb|EEB36329.1| hypothetical protein ANHYDRO_00629 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 450

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 17/225 (7%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++ +     N+   YV+    C   C YC     V + +  +E+   S +  ++ +  L 
Sbjct: 149 DDYVNYNSKNNFQAYVNIMTGCDNFCSYC----IVPQSRGREESRRPSHI--IEEIENLV 202

Query: 67  GPRSISSIFFGGGTPSLIEPQNIA----LILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                     G    S     +       +L+  A+   +      T  ++P  +  +  
Sbjct: 203 NNGYKEITLLGQNVNSYGNKSDFNVTFPELLERCAQIEGLERLRFTT--SHPKDLSDDLI 260

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYA 178
           +  ++     N   L +QS  ++ L+ + R +N  + +      R   P +  S D+I  
Sbjct: 261 RVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEKARKLREEIPNIAISTDIIVG 320

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            P +T   ++  L        D    ++ +    T   K+    +
Sbjct: 321 YPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKLETIDE 365


>gi|253577823|ref|ZP_04855095.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850141|gb|EES78099.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 349

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 59/192 (30%), Gaps = 11/192 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +R      + +  S    +    +        +    GG       
Sbjct: 65  YCKNNCYYCG----IRCSNTDADRYRLSLEQILS-CCETGWNLGFRTFVLQGGEDPHFTD 119

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           ++I  I+  I + +      +  +  +       ++Q Y  AG +R  L  ++ +E   +
Sbjct: 120 EHICQIVRTIKEIYP-----DCAVTLSIGEKSEESYQAYFNAGADRYLLRHETADEDHYK 174

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +       +   + I  +     +   P QT+     +         + + + 
Sbjct: 175 KLHPEQMSLVFRKNCLKNLKKIGYQTGCGFMVGSPGQTVDTLYRDFLFIKELKPEMIGIG 234

Query: 206 QLTIEKGTLFYK 217
                K T F K
Sbjct: 235 PFIPHKDTPFAK 246


>gi|332188733|ref|ZP_08390446.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sphingomonas sp. S17]
 gi|332011239|gb|EGI53331.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sphingomonas sp. S17]
          Length = 440

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC                  + + E + +    G R I+ +   G   +     
Sbjct: 158 CDKFCTYC---VVPYTRGAEVSRSFSAIVDEAKALVD-AGAREITLL---GQNVNAWNDA 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           +   +   I +   +S    I     +P+ +       +R  ++ +  + L VQS  ++ 
Sbjct: 211 DDRGLHGLIRELDRISGLHRIRYTTSHPNDMTQGLIDAHRDVESLMPFLHLPVQSGSDRI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H     +  I   R   P ++   D I   P +T  ++   L    +      
Sbjct: 271 LKAMNRQHTRDSYMRVIDRVRAARPDIALSGDFIVGFPGETEEEFADTLSLVDAMGHAQA 330

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             ++ +   GT    M       +  + +      L +   + +
Sbjct: 331 FSFKYSPRPGTPAATMADQLPAEVMDDRLQRLQAALNRDQHAFN 374


>gi|157964499|ref|YP_001499323.1| MiaB-like tRNA modifying enzyme [Rickettsia massiliae MTU5]
 gi|157844275|gb|ABV84776.1| MiaB-like tRNA modifying enzyme [Rickettsia massiliae MTU5]
          Length = 421

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 148 CDHFCTFC-----IIPYGRGKSRSVA--IGAIAAQVKHLVLNGFKEVVFTGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + 
Sbjct: 201 LPGNPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 LQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETHEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 316 SEAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAKILRQEGQNQLTEFFKKHI 370


>gi|17988259|ref|NP_540893.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis bv. 1 str. 16M]
 gi|225853579|ref|YP_002733812.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis ATCC 23457]
 gi|256045757|ref|ZP_05448635.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112476|ref|ZP_05453397.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           bv. 3 str. Ether]
 gi|256262937|ref|ZP_05465469.1| RNA modification protein [Brucella melitensis bv. 2 str. 63/9]
 gi|260563053|ref|ZP_05833539.1| RNA modification protein [Brucella melitensis bv. 1 str. 16M]
 gi|265992174|ref|ZP_06104731.1| RNA modification protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993912|ref|ZP_06106469.1| RNA modification protein [Brucella melitensis bv. 3 str. Ether]
 gi|81851031|sp|Q8YEA2|MIAB_BRUME RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|17984028|gb|AAL53157.1| miab protein [Brucella melitensis bv. 1 str. 16M]
 gi|225641944|gb|ACO01858.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           ATCC 23457]
 gi|260153069|gb|EEW88161.1| RNA modification protein [Brucella melitensis bv. 1 str. 16M]
 gi|262764893|gb|EEZ10814.1| RNA modification protein [Brucella melitensis bv. 3 str. Ether]
 gi|263003240|gb|EEZ15533.1| RNA modification protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092811|gb|EEZ16986.1| RNA modification protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326410151|gb|ADZ67216.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis M28]
 gi|326539870|gb|ADZ88085.1| RNA modification enzyme, MiaB family protein [Brucella melitensis
           M5-90]
          Length = 467

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIAHLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|328875973|gb|EGG24337.1| radical SAM domain protein [Dictyostelium fasciculatum]
          Length = 528

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 28/207 (13%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----F 76
           C  +C +C       D +SHVRR+         S    +Q    +T    I  +      
Sbjct: 271 CPFRCAFCQHRESDSDSDSHVRRHM--------SLTRTLQESEWITNNPVIQDLAVLDPI 322

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SL 135
               P+ +  + +  +L G   +  +S    + +   P    ++     +  G   +   
Sbjct: 323 FNSGPNYL--EILDQLLRG-RYSGKLSLQCRLEMVKEPF---LDRVSRLKDQGCQVVLEF 376

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G+Q++     + + R +N    +  +        +    LIY LP QT+  ++  +    
Sbjct: 377 GLQTIHAAEQKLIDRPNNIKRVVQILKEVGQRAIQTEISLIYGLPLQTVETFKETIDFCR 436

Query: 196 SYAVDHLSLY--QLTIEKGTLFYKMHK 220
           ++A ++  ++   L + +GT  +    
Sbjct: 437 THAPNNAVIHAFPLMLLRGTPLFHRKH 463


>gi|197119669|ref|YP_002140096.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase with
           cobalamin binding-like domain [Geobacter bemidjiensis
           Bem]
 gi|197089029|gb|ACH40300.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase with
           cobalamin binding-like domain [Geobacter bemidjiensis
           Bem]
          Length = 487

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 84/267 (31%), Gaps = 33/267 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       +   G+    +  L     + ++   + ++ +     T + + P+
Sbjct: 220 CPVACSFC-----AIQATFGRSVRFRDPLFIADELDRMVREQKVNHVVIADDTFT-LNPE 273

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A+I + + ++   S N     +   ++V     +  R+ G  +++ GV+S   + L  
Sbjct: 274 RAAVICEILTRSGIRSWNC----DTRVNTVTPELLRLMRRCGCEKVAFGVESGSPRLLEL 329

Query: 148 LGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL-PKQTMTQWEMELQRALSYAVDHLSLY 205
           +G+     +   A+  AR    R +  + I    P +T    E   +         +S+ 
Sbjct: 330 MGKGITVGQVENAVRWAREAGIRHVEGNFIIGCDPSETREDLEQTRRLIRGLPWSFVSVS 389

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVA-----------VDLYNLTQSITSAHGLHAYEIS 254
            +    GT   +      L+ P                       + +       ++  S
Sbjct: 390 VVVPYPGTPLREKMLAAGLIEPGVPWEDYVIFGKKPRWRTTNFSAEELLECQ--RSFTRS 447

Query: 255 NHSFLGA--------ESLHNLNYWRYG 273
            +              S   L YW   
Sbjct: 448 FYLRPRYVLEQLAAIRSREELGYWTRA 474


>gi|154249151|ref|YP_001409976.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Fervidobacterium nodosum Rt17-B1]
 gi|229890533|sp|A7HK86|MIAB_FERNB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|154153087|gb|ABS60319.1| RNA modification enzyme, MiaB family [Fervidobacterium nodosum
           Rt17-B1]
          Length = 430

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGTP 81
           +H   C + C YC            +   I   L E++ + Q      +           
Sbjct: 143 IH--GCDRFCTYC---IVPYTRGREKSRPIDEVLKEVESLSQRGYKEFTFLGQNVDAYGK 197

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            L +  ++A +L   ++   V       + + P+   +   +   ++      I L VQ 
Sbjct: 198 DLRDGTSLAKLLKLASQIDNVKRLWF--LTSYPTDFSLEIPKVMLESEKVARSIHLPVQH 255

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R +   E I  I+  R I P   +S D+I   P +    +E  ++     
Sbjct: 256 GSDKILKAMNRRYTRQEYIDLINEIRKIVPDASISSDIIVGFPGENDEDFEATVELVKLL 315

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             + L+L   +  +GT+ +K
Sbjct: 316 KFERLNLAVYSPREGTVAWK 335


>gi|319405110|emb|CBI78714.1| bifunctional enzyme [Bartonella sp. AR 15-3]
          Length = 460

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  I   + ++    +      +  I   G   +    Q
Sbjct: 176 CDKFCTFC-----VVPYTRGAE--ISRSVKQITDEARQLIEAGVKEITLLGQNVNAWRGQ 228

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
           +I      + D +     +     +     +P  ++ +    +R   +    + L VQS 
Sbjct: 229 SIDGKTWRLGDLLHHLAKIDGLKRLRYTTSHPRDMDDSLIAAHRDLDILMPYLHLPVQSG 288

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H +   +  I   R   P ++F  D I   P +T   +E  ++      
Sbjct: 289 SDRILKAMNRQHKSIHYLHLIDKIRAAKPDIAFSGDFIVGFPGETDEDFEETIKLIKQVG 348

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT+   M    D
Sbjct: 349 YSSAYSFKYSPRPGTVGATMKNHVD 373


>gi|239947306|ref|ZP_04699059.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921582|gb|EER21606.1| conserved hypothetical protein [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 423

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 148 CDHFCTFC-----IIPYGRGKSRSVA--IGAIAEQVKHLVLNGFKEVVFTGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + 
Sbjct: 201 LPGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 LQAGDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 316 SEAELQYLHVFPYSEREGTPAARMPQVPKNIR--KERAEILRQEGQNQLTEFFKKHI 370


>gi|163734082|ref|ZP_02141523.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseobacter litoralis Och 149]
 gi|161392618|gb|EDQ16946.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseobacter litoralis Och 149]
          Length = 554

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 18/208 (8%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  ++     +  +  L    
Sbjct: 186 YIYIPLGTRVAIPNLARGCPFTCSFCS------QWKFWRDYRVRDPKDVVDEIEDLVDNH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         PS+ + + IA   + I +         I         + +  + YR+AG
Sbjct: 240 GVGFFILADEEPSINKKKFIAFCQELIDRGLPDRVKWGINTRVTDIYRDRDLLKFYREAG 299

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +     E   AI L R     +    I  L  +T    E 
Sbjct: 300 LVHVSLGTEAAAQMKLDIFNKETKVDENKEAIRLLREADILVEAQFIVGLDNETPETLEE 359

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             Q A  +  D  +    T    T  ++
Sbjct: 360 TFQMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|22298858|ref|NP_682105.1| hypothetical protein tlr1315 [Thermosynechococcus elongatus BP-1]
 gi|81743104|sp|Q8DJB2|MIAB_THEEB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|22295039|dbj|BAC08867.1| tlr1315 [Thermosynechococcus elongatus BP-1]
          Length = 450

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 15/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC            Q    ++   E++ +    G + ++ +      +G   P 
Sbjct: 154 CNERCTYC---VVPGVRGQEQSRRPEAIRAEIEELAAQ-GYKEVTLLGQNIDAYGRDLPG 209

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +      D +     V+    I     +P        +   +         +  Q
Sbjct: 210 ITPEGRRQHTFTDLLYYIHDVAGIERIRFATSHPRYFTERLIRACAELPKVCKHFHIPFQ 269

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S + + L+ + R +     +  I   R   P   +S D I   P +T  Q++  L    +
Sbjct: 270 SGDNEILKAMARGYTRERYLHIIETIRRYMPDAAISADAIVGFPGETEEQFQRTLDLVAA 329

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              D L+    +    T            +  + +    + + +
Sbjct: 330 VGFDQLNTAAYSPRPNTPAATWENQVPEAIKEDRLQRLNHLVAK 373


>gi|18311007|ref|NP_562941.1| MiaB-like tRNA modifying protein [Clostridium perfringens str. 13]
 gi|168208727|ref|ZP_02634352.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
           ATCC 3626]
 gi|168212938|ref|ZP_02638563.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
           F4969]
 gi|18145689|dbj|BAB81731.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|170713061|gb|EDT25243.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
           ATCC 3626]
 gi|170715635|gb|EDT27817.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
           F4969]
          Length = 434

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++   +  L E++ + +      I S   G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP--KKVLDEIRSLAEHGFKEIILS---GIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  ++E   +     A+ 
Sbjct: 265 ATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|322833884|ref|YP_004213911.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602]
 gi|321169085|gb|ADW74784.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602]
          Length = 474

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 72/232 (31%), Gaps = 26/232 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K   YC F                  L E+  +    G R ++ +           F 
Sbjct: 157 CNK---YCSFCVVPYTRGEEVSRPCDDVLFEVAQLAAQ-GVREVNLLGQNVNAYRGDAFE 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I        +      ++P     +  + Y+     V+ + L
Sbjct: 213 GGVCTF---AELLRLVAAIDGI-----DRIRFTTSHPVEFTDDIIEVYKDTPEVVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L  + R H   E  + I    A       S D I   P +T   +E  +  
Sbjct: 265 PIQSGSDRILTMMKRPHTVLEYKSTIRKLRAARPDIHFSSDFIIGFPGETNEDFERTMDL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 D    +  +   GT    M  D  +    + +A+    +TQ +   
Sbjct: 325 IAQVNYDVSFSFIYSPRPGTPAADMVDDVSMDEKKQRLALLQDRITQQVMRF 376


>gi|312793678|ref|YP_004026601.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180818|gb|ADQ40988.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 471

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 81/265 (30%), Gaps = 31/265 (11%)

Query: 19  LGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPR 69
           +  +V+  + C   C YC            +    +  + E++ + Q        L    
Sbjct: 181 VSAFVNIIYGCNNFCSYC---IVPYVRGRERSRRPEEIIYEIEQLAQNGVKEVTLLGQNV 237

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +      G G            +L+ + +   +     +T  ++P  +        R   
Sbjct: 238 NSYGKDLGNGIT-------FPKLLEKVNEIEGIERIRFVT--SHPKDLSDELIVAMRDLE 288

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                I L VQS   + L+ + R++   + +  +   +   P ++   D+I   P +T  
Sbjct: 289 KVCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDE 348

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSI 242
            +E  L        D    +  +  +GT   KM       +  +        +  +    
Sbjct: 349 DFEDTLDVCRKVEFDSAYTFIYSKRRGTPAEKMPNQVPDDIKHQRFQRLVKLVEEIALKK 408

Query: 243 TSAHGLHAYEISNHSFLGAESLHNL 267
                   YEI      G    +NL
Sbjct: 409 NRQMLGKTYEI---LIDGHSKRNNL 430


>gi|329121178|ref|ZP_08249806.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
           DSM 19965]
 gi|327470260|gb|EGF15721.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
           DSM 19965]
          Length = 447

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 13/217 (5%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +T    +++  +V     C K C YC     +  Y  G+E   +     ++ ++QL  
Sbjct: 144 SELTASRKSNIFAWVPIMQGCNKFCTYC-----IVPYVRGRETS-RPISDVLKEVKQLAK 197

Query: 68  PRSISSIFFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGY 125
                    G    S  ++ +N     D I    TV     I  + ++P  +        
Sbjct: 198 DGYKEITLLGQNVNSYGLDFRNGTDFSDLIKALDTVDGIERIRYMTSHPRDMTFEMVDAI 257

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
            ++   V ++ L VQ    + L+ + R +            +   P +    DLI   P 
Sbjct: 258 AESPKVVTQMHLPVQHGSNEMLKKMNRGYTIEHYFELFDYVKKKIPDVVVTTDLITGFPG 317

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +T    +  L+       D    +  +  KGT   +M
Sbjct: 318 ETEEMHKETLEILKRARFDSAYTFIYSPRKGTPAARM 354


>gi|14521928|ref|NP_127405.1| hypothetical protein PAB1134 [Pyrococcus abyssi GE5]
 gi|14916852|sp|Q9UXX9|Y1729_PYRAB RecName: Full=Putative methylthiotransferase PYRAB17290
 gi|5459148|emb|CAB50634.1| Hypothetical protein, UPF0004 family [Pyrococcus abyssi GE5]
          Length = 425

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC   F   V +     E  +      ++   +     +  +  +G    +   
Sbjct: 148 CLNACTYCATRFARGVLKSYSP-EKIVGWVKWAIKQGYKEIWLSAEDTGCYGFDIGT--- 203

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSS---VEVNNFQGYRKAGV-NRISLGVQSL 140
             N+A +LD I     +     + +   NP+          + Y+   +   + L VQS 
Sbjct: 204 --NLAKLLDEITA---IEGEFRVRVGMMNPNHVLKFLDELIEAYQDEKIYKFLHLPVQSG 258

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           +   LR +GRN+   E    +   R  FP ++   D+I   P +    ++  ++      
Sbjct: 259 DNDILRRMGRNYTVEEFEEIVKEFRKKFPDLNLHTDIIVGFPGEDDEAFQRSVELIRRIR 318

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +++ + +   GT+  K 
Sbjct: 319 PDKVNVSRYSPRPGTIAAKW 338


>gi|209515280|ref|ZP_03264147.1| Tryptophanase [Burkholderia sp. H160]
 gi|209504261|gb|EEA04250.1| Tryptophanase [Burkholderia sp. H160]
          Length = 1008

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 9/199 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     V     G+   ++     +  M  L   R ++         +L    
Sbjct: 203 CNRSCIYC-----VEPLIKGRSVRMREPDDVVAEMASLVE-RGVNVFHINDSEFNLSVAH 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A  L        ++  ++      P           + AG   ++ GV S  E  L+ 
Sbjct: 257 PLA--LCAAIIRHGLAGKIQWYAYGMPRPFPDELAAAMKAAGCVGMNFGVDSASETMLKI 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY-Q 206
           L R  +A +   A+  A+        +L++  P +T       ++       + +S+   
Sbjct: 315 LRRTFSAPDIEHAVKTAKRHGLEHIIELLFGAPGETQETARETIEFIKRVDPERVSVTVG 374

Query: 207 LTIEKGTLFYKMHKDGDLV 225
           L I  GT   +M +   L 
Sbjct: 375 LRIFPGTELEQMIRREGLH 393


>gi|149912565|ref|ZP_01901099.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. AzwK-3b]
 gi|149812971|gb|EDM72797.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. AzwK-3b]
          Length = 419

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 90/247 (36%), Gaps = 22/247 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C  +C +C     +  +  G    + + +  +  +++L   R  + +   G   +     
Sbjct: 148 CDHRCTFC-----IIPFGRGNSRSVPAGV-VVDQIKRLV-DRGFNEVVLTGVDLTSWGAD 200

Query: 84  IEPQNIALILDGIAKNWTVSSNVEI--TIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
           +  +    + D + +   +  ++        +   V+ N  Q     K  +  + L +Q 
Sbjct: 201 LPAE--PRLGDLVMRILKLVPDLPRLRISSIDSIEVDDNLMQAIATEKRLMPHLHLSLQH 258

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   +AI  +  AR + P M+F  D+I   P +T   +   L+     
Sbjct: 259 GDDLILKRMKRRHLRDDAIRFVEEARGLRPEMTFGADIIAGFPTETEAAFANSLKLVEEC 318

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV---AVDLYNLTQSITSAHGLHAYEIS 254
            +  L ++  +   GT   +M +     +        A     +T+ +    G   Y + 
Sbjct: 319 DLTWLHVFPYSPRPGTPAARMPQVNGRDIKERAARLRAAGERQVTRHLAEQQGRTHYILM 378

Query: 255 NHSFLGA 261
             + +G 
Sbjct: 379 ESARMGR 385


>gi|312144012|ref|YP_003995458.1| RNA modification enzyme, MiaB family [Halanaerobium sp.
           'sapolanicus']
 gi|311904663|gb|ADQ15104.1| RNA modification enzyme, MiaB family [Halanaerobium sp.
           'sapolanicus']
          Length = 440

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 68/196 (34%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +    +S L E++  + Q      ++    G         
Sbjct: 157 CNQFCSYC---IIPYARGPVRSREQKSILNEIKKMIGQGVKEIILTGTHLGAYGTDKGNK 213

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
             +  ++  + +   +      +IE     ++        +  +    + L +QS   + 
Sbjct: 214 TALTDLMQQLTELNNLQRLRLSSIEGT--EIDAKMIDLIAENDIFCPHLHLPLQSGSNEI 271

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R + A E    I+  R   P ++   D+I   P +    ++  L+         +
Sbjct: 272 LKAMQRPYTAEEFKETINKIRAKIPDIAITTDIIVGFPGENEKTFKQTLELVKELKFSKI 331

Query: 203 SLYQLTIEKGTLFYKM 218
            ++  +  +GT  +KM
Sbjct: 332 HVFPFSAREGTPAFKM 347


>gi|257790045|ref|YP_003180651.1| Coproporphyrinogen III oxidase-like Fe-S oxidoreductase
           [Eggerthella lenta DSM 2243]
 gi|317489489|ref|ZP_07947999.1| hypothetical protein HMPREF1023_01698 [Eggerthella sp. 1_3_56FAA]
 gi|325830420|ref|ZP_08163877.1| conserved domain protein [Eggerthella sp. HGA1]
 gi|257473942|gb|ACV54262.1| Coproporphyrinogen III oxidase-like Fe-S oxidoreductase
           [Eggerthella lenta DSM 2243]
 gi|316911418|gb|EFV33017.1| hypothetical protein HMPREF1023_01698 [Eggerthella sp. 1_3_56FAA]
 gi|325487887|gb|EGC90325.1| conserved domain protein [Eggerthella sp. HGA1]
          Length = 297

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 78/263 (29%), Gaps = 21/263 (7%)

Query: 44  YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103
                  +  + + E++          + ++  GGG  S      IA I+  + +   V+
Sbjct: 32  DSARMARYADALVAEIEANAGQFDDCLVRAVQLGGGVASNAGAD-IARIVRAVRQVCDVA 90

Query: 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL 163
            +  + + ++ ++V       +R+AGV R    + SL       L R  N ++       
Sbjct: 91  EDAPVAMRSSIANVSGATMPFFRRAGVTRFDFEMLSLNPVDFVRLNRVDNLNDLPIICDH 150

Query: 164 ARNIFPRMSFDLIYALPKQTMT------QWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             + +   +  L+ A                     A      H               +
Sbjct: 151 FLHSYANDTLGLVLAFGHDASEGGDGALNVRRTALAAARSHATH--------------AE 196

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIG 277
           + +  D +    +      +  +   + HG   Y     +  G E             IG
Sbjct: 197 LVRVADELAAGCDEVARQLDEMRGALTEHGFMEYLPLRFARAGKEDRFAQMAAAGVPQIG 256

Query: 278 IGPGAHSRVKVGSHRVAISIEKH 300
            G GA +R+          + ++
Sbjct: 257 FGLGAITRIDGAESVNTRDLARY 279


>gi|75909246|ref|YP_323542.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anabaena
           variabilis ATCC 29413]
 gi|123758760|sp|Q3M8N9|MIAB_ANAVT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|75702971|gb|ABA22647.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Anabaena variabilis ATCC
           29413]
          Length = 454

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    ++   EM+ + +  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPEAVRAEMEELGRQ-GYKEITLLGQNIDAYGRDLPG 212

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                +++    D +     V     I     +P        +   +         +  Q
Sbjct: 213 ATPEGRHLHTFTDLLYYVHDVPGIERIRFATSHPRYFTERLIKACAELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + Q L+ + R +   +    I   R   P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNQLLKAMARGYTQEKYRRIIDTIRRYMPDASISADAIVGFPGETEEQFENTLKLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|319649479|ref|ZP_08003635.1| YmcB protein [Bacillus sp. 2_A_57_CT2]
 gi|317398641|gb|EFV79323.1| YmcB protein [Bacillus sp. 2_A_57_CT2]
          Length = 515

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 81/234 (34%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C K C YC     +  Y  G+E   +     +Q +RQL           G      G   
Sbjct: 224 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRQLAAQGYQEITLLGQNVNAYGKDF 277

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D + K   +         ++P   + +  +   K G  V  I L VQS
Sbjct: 278 EDMN-YGLGDLMDEMRK---IDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQS 333

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
                L+ + R +   + +  +   +   P    + D+I   P +T  Q+E  +      
Sbjct: 334 GSTDVLKIMARKYTREQYLELVRKIKAAIPEATFTTDIIVGYPNETEEQFEETISLYREV 393

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             +    +  +  +GT   KM  +  + +  +   +   N   +  SA  +  Y
Sbjct: 394 GFEAAYTFIYSPREGTPAAKMVDNVPMEV--KKERLQRLNAVVNELSAEAMKKY 445


>gi|258592142|emb|CBE68447.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 438

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 17/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C   C +C            +    Q  + E++ +++  G R ++ +      +G     
Sbjct: 153 CDHFCTFC---VVPFTRGRERSRPPQEIVEEIRGLKRQ-GYREVTLLGQTVNSYGRKLT- 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P +   +L  I +       V      +P  V                +I L VQS 
Sbjct: 208 --PPISFVELLRQIDQLVDSQMRVRF-TSPHPLDVTDELAAAIAALPSLCEQIHLPVQSG 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H   E +  I L R   P ++   D+I   P +T   ++  L       
Sbjct: 265 SDRILYQMKRGHTRDEYLKKIALLRARTPEIAITTDVIVGFPGETEEDFQATLDLMQEVG 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
            D   +++ +    T   +M   
Sbjct: 325 FDGAFMFKYSPRPHTEAERMPDQ 347


>gi|182626906|ref|ZP_02954640.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
           JGS1721]
 gi|177907756|gb|EDT70368.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
           JGS1721]
          Length = 434

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC    + R     ++   +  L E++ + +      I S   G  T S  ++ 
Sbjct: 152 CNRFCAYC-LIPYTRGSVCSKDP--KKVLDEIRSLAEHGFKEIILS---GIHTASYGVDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
                ++D + +   +     + I   +P+    +        +K       L +QS  +
Sbjct: 206 DEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTEDVVRRILALKKL-CPHFHLSLQSGCD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
            +L+ + R + A E    ++L R+    +S   D+I   P +T  ++E   +     A+ 
Sbjct: 265 STLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKRIALS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
              +++ +  KGT    M    D
Sbjct: 325 KTHIFKYSPRKGTRAENMENQVD 347


>gi|89099659|ref|ZP_01172533.1| YtqA [Bacillus sp. NRRL B-14911]
 gi|89085602|gb|EAR64729.1| YtqA [Bacillus sp. NRRL B-14911]
          Length = 323

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + +++   E++              +F   T +    + +  
Sbjct: 54  CTFCS-AAGSGDFAGNRADDLENQFNEIKQKMHHKWKDGKYMAYFQAFTNTHAPVEVLRE 112

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +  +  +   +        + LG+Q++ E + R +
Sbjct: 113 RYEKVLAQEDV---VGLSIATRPDCLPDDVIEYLAELNERTYLWVELGLQTVHEGTARLI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R    R+   +I  LP +T        +      V  + ++ L 
Sbjct: 170 NRAHDYQCYTDGVSKLRRHGIRVCSHIINGLPLETPDMMMETAREVSKLDVQGIKIHLLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   S+   V L      I     +  
Sbjct: 230 LLKGTPMVKQYEKGMLEFLSQEDYVRLVCDQLEILPPEMIIH 271


>gi|113461298|ref|YP_719367.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           somnus 129PT]
 gi|170717832|ref|YP_001784892.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
           somnus 2336]
 gi|123132137|sp|Q0I3Z1|MIAB_HAES1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890552|sp|B0UUU9|MIAB_HAES2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|112823341|gb|ABI25430.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus somnus 129PT]
 gi|168825961|gb|ACA31332.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus somnus 2336]
          Length = 474

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 66/203 (32%), Gaps = 20/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPS-- 82
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPTHD 212

Query: 83  --LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +     +  ++  I     +         ++P     +    Y      V+ + L VQ
Sbjct: 213 GGICSFAELLRLVASIDGIDRLR-----FTTSHPIEFTDDIIDVYADTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + RNH A E  + I   + + P   +S D I   P +T   +E  +     
Sbjct: 268 SGSDRVLNLMKRNHTALEYKSIIRKLKKVRPNIQISSDFIVGFPGETDQDFEDTMNLIAQ 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D    +  +   GT    M 
Sbjct: 328 VNFDMSFSFIYSARPGTPAADMP 350


>gi|320183045|gb|EFW57910.1| tRNA-i(6)A37 methylthiotransferase [Shigella flexneri CDC 796-83]
          Length = 474

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 76/234 (32%), Gaps = 30/234 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC       R +              Q   Q  G R ++ +           + 
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPSDDILFEIAQLAAQ--GVREVNLLGQNVNAWRGENYD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G T S     ++  ++  I        +      ++P     +  + YR     V+ + L
Sbjct: 213 GSTGSF---ADLLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  +GR H A E  A I    A     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPSETTEDFEKTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 D    +  +   GT    M       +P E     LY L + I     
Sbjct: 325 IADVNFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERINQQAM 374


>gi|317500218|ref|ZP_07958449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316898389|gb|EFV20429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 483

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 26/204 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C   C YC     +  Y  G+E      + + E++ + +      +  +  G    S   
Sbjct: 200 CNNFCSYC-----IVPYVRGRERSRDPKAIIREIERLAE---DGVVEVMLLGQNVNSYGK 251

Query: 84  -----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                +    +   ++ I K   +       + ++P  +     +   ++      + L 
Sbjct: 252 TLEHPMTFAQLLREIEKIDKIERIR-----FMTSHPKDLSDELIEVMAQSKKICRHLHLP 306

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS   + L  + R +     +  +   R   P +S   D+I   P +T   +   L   
Sbjct: 307 VQSGSTRILEKMNRRYTKEHYLKLVEKLRKAIPDISLTTDIIVGFPGETEEDFRETLDVV 366

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                D    +  +   GT    M
Sbjct: 367 RKVQYDSAFTFIYSKRTGTPAAAM 390


>gi|258544941|ref|ZP_05705175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
           ATCC 15826]
 gi|258519861|gb|EEV88720.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
           ATCC 15826]
          Length = 456

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 76/225 (33%), Gaps = 14/225 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C +C       R +     F            Q     ++          +L +  
Sbjct: 160 CSKYCTFC--VVPYTRGEEVSRPFDDVIAECASLAAQGVREINLLGQNVNAYRGALFDGG 217

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++AL+++ +A    +      T  ++P     N  + YR+    V+ + L VQS  ++
Sbjct: 218 TADLALLIEYVAAIDGIDRVRFTT--SHPVEFTDNLIEVYRRVPQLVSHLHLPVQSGSDK 275

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A++    +   R I P +SF  D I   P +    +E  +Q       D 
Sbjct: 276 VLALMKRGHKAAQYKEKLARLREIRPNISFSSDFIVGFPGEEDADFEATMQLIEDVFYDT 335

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +  +   GT    M       +P +     L  L   I    
Sbjct: 336 SFSFIYSPRPGTPAAAMPD----RIPMDVKKARLARLQARILQMA 376


>gi|226355861|ref|YP_002785601.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Deinococcus
           deserti VCD115]
 gi|226317851|gb|ACO45847.1| putative tRNA-i 6A37 modification enzyme MiaB (2-methylthioadenine
           synthetase) [Deinococcus deserti VCD115]
          Length = 459

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 67/225 (29%), Gaps = 44/225 (19%)

Query: 24  HWP---------------FCVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQ--- 60
           H P                C   C YC     V   +  Q     ++ ++    ++    
Sbjct: 129 HIPPAPTGKLQAHLTIMRGCDHHCTYC----IVPTTRGPQVSRSPDDILRELDLQLAAGV 184

Query: 61  ----WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                + Q      +       G PS      + L+     +    ++       ++P +
Sbjct: 185 QEVTLLGQNVNAYGVDQGARLAGYPSF--ADLLRLVGRSGVRRIKFTT-------SHPMN 235

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MS 172
              +      +       + L VQS     LR + R +   + +  I   R   P   ++
Sbjct: 236 FTEDVAAAMAETPAVCEFVHLPVQSGSNHVLRRMAREYTREKYLQHIAEIRRHLPHAVLA 295

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            D+I   P +T   ++  L        D   ++  +   GT  YK
Sbjct: 296 TDIIVGFPGETEEDFQDTLSLYDEVGYDSAYMFIYSPRPGTPSYK 340


>gi|254479764|ref|ZP_05093042.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
           12653]
 gi|214034296|gb|EEB75092.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
           12653]
          Length = 429

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +    ++ + E++   +      + +   G    S     
Sbjct: 145 CNQYCTYC---IIPYARGPVRSRKPENIIKEVKKYAEHGYKEIVLT---GIHIASYGRDL 198

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I     V     I I    P+ +  +  +             + +QS  +++
Sbjct: 199 KNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRHYHVSLQSGCDET 258

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR + ASE    +   R   P ++   D++   P +T  ++E   + A       +
Sbjct: 259 LKRMGRKYTASEYKEVVERLRRYIPDVAITTDIMVGFPGETEEEFEKSYKFAEEICFAKM 318

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            +++ +  KGT  Y     
Sbjct: 319 HVFKYSRRKGTRAYNFPNQ 337


>gi|281411880|ref|YP_003345959.1| RNA modification enzyme, MiaB family [Thermotoga naphthophila
           RKU-10]
 gi|281372983|gb|ADA66545.1| RNA modification enzyme, MiaB family [Thermotoga naphthophila
           RKU-10]
          Length = 443

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 87/244 (35%), Gaps = 9/244 (3%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  Y ++++   S+    +V   F C + C YC       R +              +  
Sbjct: 125 LDEYTHDLSRIRSSKHHAWVTIIFGCDRFCTYC--IVPYTRGREKSRPMEDILEEVRELA 182

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           +Q     +            L +  ++A +L+  +K   +       + + P+       
Sbjct: 183 KQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEASKIEGIERIWF--LTSYPTDFSDELI 240

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
           +   +       + L VQS   + L+ + R++   E +A +   R+  P ++   D+I  
Sbjct: 241 EVIARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVPDVAISSDIIVG 300

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T   +   +        + L+L   +  KGT+ +K +KD             L NL
Sbjct: 301 FPTETEEDFMETIDLVEKAQFERLNLAIYSPRKGTVAWKHYKDEVPYEEKVRRMQFLMNL 360

Query: 239 TQSI 242
            + I
Sbjct: 361 QKRI 364


>gi|308233982|ref|ZP_07664719.1| RNA modification enzyme, MiaB family protein [Atopobium vaginae DSM
           15829]
 gi|328944009|ref|ZP_08241474.1| MiaB family RNA modification enzyme [Atopobium vaginae DSM 15829]
 gi|327491978|gb|EGF23752.1| MiaB family RNA modification enzyme [Atopobium vaginae DSM 15829]
          Length = 421

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 80/235 (34%), Gaps = 27/235 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGT 80
           C  +C +C     V + +        E+ + S  + +    +      I+   F      
Sbjct: 145 CNNRCSFC----IVWKARGPARSVSCESVLASVRSSIAHGAREVVLTGINLGDFREIYHG 200

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGV 137
             +  P  + LILD         S++E      P  V     +   ++       + + +
Sbjct: 201 SRVRLPDLLQLILDETPVERVRLSSIE------PPDVTDELLRVMAQSQGRIAPFLHICL 254

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  E +L+ + RN+ AS   AA+  AR   P ++   DLI   P +T  +++       
Sbjct: 255 QSGCEATLKRMRRNYTASSYAAAVENARAYMPSIALGTDLIVGFPGETDDEFQTSYDFCE 314

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                 + +++ +  +GT         D  +           L + + S      
Sbjct: 315 RIGFAKMHVFRYSKREGTPAASAPNQVDPHVM-----ASRSKLMRELASRMRYEQ 364


>gi|291448226|ref|ZP_06587616.1| RNA modification enzyme [Streptomyces roseosporus NRRL 15998]
 gi|291351173|gb|EFE78077.1| RNA modification enzyme [Streptomyces roseosporus NRRL 15998]
          Length = 506

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    K   +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPMQSGSDSILKAMRRSYRQERFLGIIEKVRAAMPDAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 318 VGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADM 359


>gi|302381348|ref|YP_003817171.1| RNA modification enzyme, MiaB family [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191976|gb|ADK99547.1| RNA modification enzyme, MiaB family [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 466

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 19/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E + +    G R ++ +      + G  P 
Sbjct: 183 CDKFCSFC---VVPYTRGAEWSRPVADVLDEARGLAAQ-GVREVTLLGQNVNAYDGAGP- 237

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +  +         V     I     +P+ +  +  + +R+    +  + L VQS
Sbjct: 238 ----DGVWTLAKLARALAEVPGLDRIRYTTSHPNDMSEDLIEAHRELDALMPYLHLPVQS 293

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R H  ++ I  I   R   P ++   D I   P +T   +E  L      
Sbjct: 294 GSDRILRAMNRKHGRAKYIDLIGRIREARPDIAISGDFIVGFPGETDRDFEETLGLVREV 353

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  +  +   GT    M       +    +      + +   + +
Sbjct: 354 GYASAFTFMYSPRPGTPAATMGTQVPPEVALARLHALQALIVEQQMAFN 402


>gi|239944763|ref|ZP_04696700.1| hypothetical protein SrosN15_27475 [Streptomyces roseosporus NRRL
           15998]
 gi|239991228|ref|ZP_04711892.1| hypothetical protein SrosN1_28246 [Streptomyces roseosporus NRRL
           11379]
          Length = 497

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 133 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 190

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    K   +          +P     +
Sbjct: 191 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 249 VIAAMAETPNVMPQLHMPMQSGSDSILKAMRRSYRQERFLGIIEKVRAAMPDAAISTDII 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 309 VGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADM 350


>gi|268590389|ref|ZP_06124610.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Providencia rettgeri DSM
           1131]
 gi|291314302|gb|EFE54755.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Providencia rettgeri DSM
           1131]
          Length = 476

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGETF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     +     +P     +  + YR     V+ + L VQS
Sbjct: 214 ---DGEICSFAELLRLVAAIDGIDRVRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I   R       +S D I   P +T   +E  ++     
Sbjct: 271 GSDRVLTMMKRAHTALEYKAIIRKLREARPGILISSDFIVGFPGETTEDFEKTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D    +  +   GT    +  D       + + +    + Q   S 
Sbjct: 331 NFDMSYSFVYSARPGTPAADLPDDVTEDEKKQRLYLLQQRINQQALSF 378


>gi|253681841|ref|ZP_04862638.1| biotin synthase [Clostridium botulinum D str. 1873]
 gi|253561553|gb|EES91005.1| biotin synthase [Clostridium botulinum D str. 1873]
          Length = 348

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC    FN +V RY++  +  + S     +            +    GG  + 
Sbjct: 61  YCKNTCTYCGIRAFNKNVDRYRLSLDQIMDSCSEGYKL--------GYRTFVLQGGEDNY 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I  N+      E  +  +      ++++ Y  AGV+R  L  ++  ++
Sbjct: 113 FTDDKIVEIVTKIKSNFP-----ECAVTLSIGEKSYHSYKKYYNAGVDRYLLRHETASKE 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L    +       +   + I  ++    +  +P Q+   +  +L          + 
Sbjct: 168 LYEKLHPGMSFENRRKCLRDLKEIGYQVGAGFMIGIPGQSNEDYVEDLLFLKELEPHMVG 227

Query: 204 LYQLTIEKGTLFYK 217
           +     +  T   K
Sbjct: 228 IGPFIPQSHTPLGK 241


>gi|220904669|ref|YP_002479981.1| MiaB family RNA modification protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868968|gb|ACL49303.1| RNA modification enzyme, MiaB family [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 506

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 64/223 (28%), Gaps = 17/223 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC            +   ++     +   R+L     +  +  G          
Sbjct: 203 CAHRCTYC---IVPLTRGKPRSRPVEH---VLAEARRLLESGHVEIMISGINLGQYGRDA 256

Query: 88  N---IALILDGIAKN--WTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQS 139
                  +L  +        +      I +  P  ++       R  +     + + +Q 
Sbjct: 257 QTGDFWNLLRTLDTALAPEFAGLARFRISSLEPGQLDERALDILRHCRMLCPHLHISLQH 316

Query: 140 LEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
                L+ +GR H + +    A+      +P M    D+I   P +T    +  L+    
Sbjct: 317 GSRNVLKRMGRGHYSPAMLEEAVRELSAHWPAMGLGADIIAGFPGETEKDVQELLELVAR 376

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             + +  ++  +   GT   +        L  E  A     + 
Sbjct: 377 LPLGYAHVFPYSRRPGTAAERFEGQIPHALKLERAARVRQAVA 419


>gi|222529273|ref|YP_002573155.1| MiaB family RNA modification enzyme [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456120|gb|ACM60382.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 434

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 75/202 (37%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   ++S   E ++ +++      I+ I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRSLKSIEEEVIRLVQKGYKEFVITGINISSYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +     +         + + L +QS  ++
Sbjct: 206 DEKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNGEFIERLLSFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++  ++  + +   R  +  ++F  D+I   P +T   +   L          
Sbjct: 266 ILKLMNRHYTTAQYQSIVDRIREKWDDVAFTTDIIVGFPGETEEDFNATLDFVQKIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ + +KGT  Y+M    D
Sbjct: 326 IHVFRFSPKKGTKAYEMPNQVD 347


>gi|83309890|ref|YP_420154.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
 gi|82944731|dbj|BAE49595.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
          Length = 498

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 12/252 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C  N+     K+       S    +  + ++     + +I        ++ P+
Sbjct: 226 CPFKCSFCCINAPFGVNKIRT----WSPDNVIAQIDEMVLKYGVRNIKIPDEMF-VLNPK 280

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +   +L    K       + +   A   ++ +       + AG+N + LG++S  +    
Sbjct: 281 H---VLGICDKLIERGYGLNLWAYARVDTLNDDAMLDKLKAAGINWLGLGIESGSKYVRD 337

Query: 147 FL--GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            +  GR  N  +  A +   R+    +  + I+ LP  T+   +  L  A+S   +  + 
Sbjct: 338 GVTKGRFGNL-DISAVVRRVRDKGIYVGANYIFGLPDDTLESMQETLDLAISLNTEWANF 396

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           Y      G+  Y+M K+ +L LP +          Q       L    +S    L     
Sbjct: 397 YCAMAYPGSHLYEMAKEQNLPLPDDAGGPGWIGYAQHSFDCLPLPTATLSAQQVLDFRDQ 456

Query: 265 HNLNYWRYGDYI 276
               Y+   DY+
Sbjct: 457 AFTRYFTNPDYL 468


>gi|182435525|ref|YP_001823244.1| hypothetical protein SGR_1732 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|229891007|sp|B1VXU5|MIAB_STRGG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|178464041|dbj|BAG18561.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 506

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 200 LVAEGVCEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPMQSGSDTVLKAMRRSYRQERFLGIIEKVRAAMPEAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 318 VGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADM 359


>gi|197118085|ref|YP_002138512.1| cobalamin-binding radical SAM domain-containing iron-sulfur
           cluster-binding oxidoreductase [Geobacter bemidjiensis
           Bem]
 gi|197087445|gb|ACH38716.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase [Geobacter bemidjiensis Bem]
          Length = 424

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 71/219 (32%), Gaps = 11/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC           G    +    T ++ + +       ++ +F   T +   P 
Sbjct: 199 CPMRCSYCS-----TPALEGTAIRMHPVETVLEALSRHVAA-GFNNFYFVDNTFNF-PPD 251

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D I         +       P  V+        +AG   +SLG +S     L+ 
Sbjct: 252 YAKRLCDAIVSAQL---GIRWRCILYPGFVDEEMVSKMARAGCVEVSLGFESGSSLILKN 308

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ- 206
           L + ++      A  L R         L++  P +T    +  L  A S  +D L L   
Sbjct: 309 LNKKYDLDRVRDASELLRRHGIARMGFLMFGAPGETRETVQESLDFADSLQLDMLKLSTG 368

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + I   T   +  +   ++   +++ +  +     +   
Sbjct: 369 IRIYPDTPLAETARREGVIAGDDDLLLPRFYQAPGLDEW 407


>gi|15643418|ref|NP_228462.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Thermotoga
           maritima MSB8]
 gi|81553183|sp|Q9WZC1|MIAB_THEMA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|4981175|gb|AAD35737.1|AE001738_17 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 443

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 10/224 (4%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +H   C + C YC       R +              +   Q     +            
Sbjct: 147 IH--GCDRFCTYC--IVPYTRGRERSRPMADILEEVKKLAEQGYREVTFLGQNVDAYGKD 202

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L +  ++A +L+  +K   +       + + P+       +   K       + L VQS 
Sbjct: 203 LKDGSSLAKLLEEASKIEGIERIWF--LTSYPTDFSDELIEVIAKNPKVAKSVHLPVQSG 260

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +   E +A +   R+  P ++   D+I   P +T   +   +       
Sbjct: 261 SNRILKLMNRRYTKEEYLALLEKIRSKVPEVAISSDIIVGFPTETEEDFMETVDLVEKAQ 320

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            + L+L   +  +GT+ +K +KD             L NL + I
Sbjct: 321 FERLNLAIYSPREGTVAWKYYKDDVPYEEKVRRMQFLMNLQKRI 364


>gi|83944908|ref|ZP_00957274.1| hypothetical protein OA2633_09774 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851690|gb|EAP89545.1| hypothetical protein OA2633_09774 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 418

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C  +C +C     +  Y  G      +    +  +++L        +  G    S    L
Sbjct: 141 CDHRCTFC-----IIPYGRGNARSAPA-GEVVDQVKRLVETGHSEVVLTGVDMTSWGQDL 194

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I K       + ++   +   ++ + F+   +       + L +Q+ +
Sbjct: 195 PGTPKLGRLVRAILKQVPDLQRLRLS-SIDAIEIDEDLFRAIAEEERLCPYMHLSLQAGD 253

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H+  +AIA     R + P +    DLI   P +T   ++  L+      +
Sbjct: 254 DMILKRMKRRHSRDDAIALAKRLRAVRPDIAFGADLIAGFPTETEEMFQNSLRLVDECDL 313

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD--LVLPSENVAVDLYNLTQSITSAHGLHAY----EI 253
             + ++  +   GT   +M +     +   +  +    +   Q   ++          E 
Sbjct: 314 AFVHVFPYSPRPGTPAARMPQVDREVVKERAARLRAKSHEALQRHLASRVGKQMTVLVEK 373

Query: 254 SNHSFLG 260
              +   
Sbjct: 374 PGFARAD 380


>gi|220935460|ref|YP_002514359.1| 2-alkenal reductase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996770|gb|ACL73372.1| 2-alkenal reductase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 453

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 75/226 (33%), Gaps = 17/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C +C       R +     F        Q   Q  G R I+ +         P  +
Sbjct: 157 CSKYCTFC--VVPYTRGEEISRPFDDVLAEVAQLAAQ--GVREINLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               IA +   I     V     I     +P     +  + + +    V+ + L VQS  
Sbjct: 211 HDGEIADLALLIHYVAAVDGIERIRFTTSHPVEFSDSLIRAFAEVPELVSHVHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +S   D I   P +T   +E  ++       
Sbjct: 271 DRILAAMKRGHTALEYKSKIRRLREARPDISLSSDFIVGFPGETDADFEATMELIEQVGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA---VDLYNLTQSI 242
           D    +  +   GT    +  D  L +    +A     +  + Q+I
Sbjct: 331 DQSFSFIYSRRPGTPASSLPDDVPLEVKKARLARLQARINEMAQAI 376


>gi|241202785|ref|YP_002973881.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856675|gb|ACS54342.1| RNA modification enzyme, MiaB family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 473

 Score = 66.5 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + +   +G R I+ +      + G  P 
Sbjct: 187 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLAD-SGVREITLLGQNVNAWHGAGPQ 242

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++      +R     +  + L VQS 
Sbjct: 243 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLINAHRDLSALMPYLHLPVQSG 299

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E +  I   R + P ++   D I   P +T   ++  L+      
Sbjct: 300 SDRILKAMNRRHTAAEYLTLIERIRTVRPDIALSGDFITGFPGETDEDFKDTLRLVEEVR 359

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 360 YAQAFSFKYSTRPGTP 375


>gi|20807443|ref|NP_622614.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515967|gb|AAM24218.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 437

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +    ++ + E++   +      + +   G    S     
Sbjct: 153 CNQYCTYC---IIPYARGPVRSRKPENIIKEVKKYAEHGYKEIVLT---GIHIASYGRDL 206

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I     V     I I    P+ +  +  +             + +QS  +++
Sbjct: 207 KNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRHYHVSLQSGCDET 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR + ASE    +   R   P ++   D++   P +T  ++E   + A       +
Sbjct: 267 LKRMGRKYTASEYKEVVERLRRYIPDVAITTDIMVGFPGETEEEFEKSYKFAEEICFAKM 326

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            +++ +  KGT  Y     
Sbjct: 327 HVFKYSRRKGTRAYNFPNQ 345


>gi|330818257|ref|YP_004361962.1| 2-methylthioadenine synthetase [Burkholderia gladioli BSR3]
 gi|327370650|gb|AEA62006.1| 2-methylthioadenine synthetase [Burkholderia gladioli BSR3]
          Length = 457

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTQ 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A+   +      T  ++P          Y +    VN + L VQ 
Sbjct: 213 GSEEIADFATLIEYVAELPGIERIRYTT--SHPKEFSQRLLDVYARVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +Q     
Sbjct: 271 GSDRILMAMKRGYTVLEYKSLIRKLRAIRPDLSLSTDIIIGFPGETEADFDKTMQLVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|157827747|ref|YP_001496811.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU
           85-389]
 gi|229890631|sp|A8GY24|MIAB_RICB8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157803051|gb|ABV79774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU
           85-389]
          Length = 446

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 67/226 (29%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R      N  Q +   ++ +        +   ++    G  S   
Sbjct: 162 CDKFCTFC--VVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKTS--- 216

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN--FQGYRKAGVNRISLGVQSLEE 142
              +  + D I     + +   +     +P  +  +     G     +  + L VQS   
Sbjct: 217 DDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSN 276

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++L+ + R H+       I   R     +  S D I   P +T   +   L         
Sbjct: 277 KTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDLVRKVKYG 336

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ +   GT            + SE + +    L     + +
Sbjct: 337 QCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQKELAAQQLAFN 382


>gi|323694864|ref|ZP_08109017.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
 gi|323501090|gb|EGB16999.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
          Length = 486

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC +          +    ++ + E +++ +      +  +     T +  + +
Sbjct: 219 CPAHCNYCVYP-QTLHGHKYRLRSPENVVEEFEYIAKNFP--EVHEVVIEDDTFTANKER 275

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              I  +L+       +       +     ++++   Q  ++AG + I  G +S  EQ L
Sbjct: 276 VIKICELLEEKKLTKRLKWLCNARV-----NIDLKTMQAMKRAGCHLIIPGFESYNEQIL 330

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + +  N     A +  A+     +    +     +T    E  L  A+ +  D +  +
Sbjct: 331 KNIKKGSNLKLIDAYVENAKKAGLMIHACYMVGNQGETQETMEHTLDAAMRFKTDTVQFF 390

Query: 206 QLTIEKGTLFYKM 218
            L    GT  Y+ 
Sbjct: 391 PLIPYPGTEAYQW 403


>gi|332288529|ref|YP_004419381.1| hypothetical protein UMN179_00448 [Gallibacterium anatis UMN179]
 gi|330431425|gb|AEC16484.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
          Length = 462

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 66/203 (32%), Gaps = 20/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPS-- 82
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 144 CNK---YCSFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPTHD 199

Query: 83  --LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +     +  ++  I     +         ++P     +    YR     V+ + L VQ
Sbjct: 200 GGICSFAELLRLVAAIDGIDRLR-----FTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQ 254

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + RNH A E  A I   R   P +  S D I   P +T   +E  +     
Sbjct: 255 SGSDRILSMMKRNHTALEYKAIIRKLREARPDIQISSDFIVGFPGETAQDFEQTMNLIAQ 314

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D    +  +   GT    M 
Sbjct: 315 VNFDMSFSFIYSARPGTPAADMP 337


>gi|309775695|ref|ZP_07670693.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308916534|gb|EFP62276.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 478

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 78/240 (32%), Gaps = 24/240 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     ++ +R L           G    S    +
Sbjct: 198 CDKFCTYC-----IVPYTRGKERS-RLMEDILEEVRVLKQDGFKEITLLGQNVNSYGKDL 251

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +     L        +      T  ++P            +    +  I L VQS + 
Sbjct: 252 HMEGGFAKLLEETAKTGIERIRFTT--SHPWDFSDEMIDVIARYDNIMPFIHLPVQSGDS 309

Query: 143 QSLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +   + +   H  +       +S D+I   P +T  Q++  L        D
Sbjct: 310 DILKIMGRRYTREQYLTLFHKIKERVAGCAISTDIIVGFPNETEEQFQNTLSLVDECQFD 369

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           +   +  +  +GT    M  +  L               Q +     L+A+E  N ++LG
Sbjct: 370 NAFTFIYSPREGTPAAAMEDNIPL--------AVKQRRLQELNERWNLYAHE-KNEAYLG 420


>gi|319898348|ref|YP_004158441.1| bifunctional enzyme [Bartonella clarridgeiae 73]
 gi|319402312|emb|CBI75851.1| bifunctional enzyme [Bartonella clarridgeiae 73]
          Length = 460

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  I   + ++           +  I   G   +    Q
Sbjct: 176 CDKFCTFC-----VVPYTRGAE--ISRSVEQITNEAHQLIEAGVKEITLLGQNVNAWHGQ 228

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
           +I      + D +     +     +     +P  ++ +    +R   +    + L VQS 
Sbjct: 229 SIDGKTWRLGDLLHHLAKIDGLKRLRYTTSHPCDMDDSLIAAHRDLDILMPYLHLPVQSG 288

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H +   +  I   R   P ++F  D I   P +T   +E  ++      
Sbjct: 289 SDRILKAMNRQHKSIHYLHLIDKIRAARPDIAFSGDFIVGFPGETDEDFEETIKLIKQVG 348

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT+   M    D
Sbjct: 349 YSSAYSFKYSSRPGTVGATMKNHVD 373


>gi|256821541|ref|YP_003145504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM
           16069]
 gi|256795080|gb|ACV25736.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM
           16069]
          Length = 446

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 14/220 (6%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIE 85
           C  YC F      R +     F        Q   Q  G R I     ++    G     +
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPFDDVLAECAQLAEQ--GVREINLLGQNVNAYRGITHEGD 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A ++  +A    +      T  ++P        Q Y +    V+ + L VQS  ++
Sbjct: 215 TADLAELITYVAAIDGIDRIRYTT--SHPVEFSERLIQVYAEVPELVSHLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H   E  + I   R I P +S   D I   P ++   +E  +        DH
Sbjct: 273 VLAMMKRGHTVLEYKSKIRKLRQIRPDISMSSDFIIGFPGESDQDFEDTMNLIGDIGYDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              +  +   GT    +  D  + +  + +++    + Q 
Sbjct: 333 SFSFIYSARPGTPAADIVDDTPMDVKKQRLSILQQRINQQ 372


>gi|39995977|ref|NP_951928.1| radical SAM domain/B12 binding domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982742|gb|AAR34201.1| radical SAM domain protein/B12 binding domain protein [Geobacter
           sulfurreducens PCA]
 gi|298504993|gb|ADI83716.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase with TPR domain [Geobacter sulfurreducens
           KN400]
          Length = 554

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 62/189 (32%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C            +    ++ + E++++R   G   + S      T +     
Sbjct: 196 CPASCRFCSSPRFWGTSLRLRSP--RAMVDEIRYIRDRFG---LLSFSLRDDTFT----A 246

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +++          ++  + ++  + V+       R+AG   +  GV+S  E+ L  
Sbjct: 247 RADRVIEFCRLLTAEGLHILWSCQSRVNCVDEEMLLWMRRAGCEYVQYGVESGSERILAR 306

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+     +   A    R     +S  LI  +P +        L+           +  L
Sbjct: 307 LGKRITPDQVQRAAAATRRAGMDLSIYLIAGVPGEDEEDLRATLRLIEDIRPHDGHVAPL 366

Query: 208 TIEKGTLFY 216
               GT  +
Sbjct: 367 AYYPGTALF 375


>gi|291566663|dbj|BAI88935.1| tRNA-i(6)A37 modification enzyme MiaB [Arthrospira platensis
           NIES-39]
          Length = 452

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 80/222 (36%), Gaps = 16/222 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           ++  E+    +  +++  +V+  + C ++C YC            Q    ++   EM+ +
Sbjct: 132 INIVEDITKPRRDSNITAWVNVIYGCNERCTYC---VVPNVRGTEQSRTPEAIRAEMEEL 188

Query: 63  RQLTGPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            +  G + ++ +      +G   P S  + ++   + D +     +     I     +P 
Sbjct: 189 AR-AGYKEVTLLGQNIDAYGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPR 247

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RM 171
                  +   +         +  QS +   LR + R +   +    I+  R   P   +
Sbjct: 248 YFTERLIRACAELPKVCEHFHIPFQSGDNDVLRAMARGYTHEKYRRIINTIREYIPDASI 307

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           S D I   P +T  Q+E  L+     A D L+    +   GT
Sbjct: 308 SADAIVGFPGETEAQFENTLKLVDDIAFDLLNTAAYSPRPGT 349


>gi|254718191|ref|ZP_05180002.1| RNA modification protein [Brucella sp. 83/13]
 gi|265983149|ref|ZP_06095884.1| RNA modification protein [Brucella sp. 83/13]
 gi|306837705|ref|ZP_07470574.1| RNA modification enzyme, MiaB family [Brucella sp. NF 2653]
 gi|264661741|gb|EEZ32002.1| RNA modification protein [Brucella sp. 83/13]
 gi|306407263|gb|EFM63473.1| RNA modification enzyme, MiaB family [Brucella sp. NF 2653]
          Length = 467

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   R++ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRDVRPDMALSGDFIVGFPGETDQDFEDTMQLVRE 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|73666881|ref|YP_302897.1| 2-methylthioadenine synthetase [Ehrlichia canis str. Jake]
 gi|123759460|sp|Q3YSK6|MIAB_EHRCJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|72394022|gb|AAZ68299.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ehrlichia canis str.
           Jake]
          Length = 441

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 23/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFL--------TEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C                +++          + ++ +  +    +     + G 
Sbjct: 157 CNKFCTFC---VVPYTRGEEYSRTVEAIFNEALVLADSGIKEITLIGQNVNAYHGTYKG- 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISLGV 137
                   ++  ++  IAK   +      T  ++P  +  + ++     +  +  + L V
Sbjct: 213 -----CEWDLGKLIQHIAKIPNIERIRYTT--SHPRDMHQSLYEAHKLEEKLMPFVHLPV 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R H A E I  I   R   P +  S D I   P +T   +E  ++   
Sbjct: 266 QSGSDRILKKMNRKHTAEEYIDIISHLRKQRPDIAFSSDFIVGFPGETEEDFENTIKLVE 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                    ++ +   GT   +        + SE +      L +   + +
Sbjct: 326 KVKFSQAYSFKYSPRPGTPGAEYPNQVPEEIKSERLLRLQKLLREQQLAFN 376


>gi|42525164|ref|NP_970544.1| hypothetical protein Bd3841 [Bdellovibrio bacteriovorus HD100]
 gi|81615876|sp|Q6MGT1|RIMO_BDEBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|39577375|emb|CAE81198.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 457

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 67/209 (32%), Gaps = 21/209 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C+K+C +C            Q   I + + E + +          ++   +         
Sbjct: 163 CMKRCAFCA---IPLIRGNLQSRSIDAIVAEAKLLVAGGVKELIIISHDFTDYGFDIRRK 219

Query: 80  TPSLI-EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
            P+    P  +   LD +     +       +   P  +     Q  + +   V    + 
Sbjct: 220 DPTRKESPVELLKALDQVEGLQWIR-----LMYLYPDGITQEMVQVIKNSTKIVKYFDMP 274

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRA 194
           +Q + +Q L+ + R     E   A+   R   P   +    I   P +T  Q+E  L   
Sbjct: 275 LQHVNDQVLKSMNRKMTRDEIETALMNIREHLPEAVIRTQFIVGFPGETQEQFEELLNFV 334

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                D +  ++ + E+ T   +M    D
Sbjct: 335 AEQQFDRVGCFKYSPEENTPGGRMENQID 363


>gi|205374579|ref|ZP_03227374.1| hypothetical protein Bcoam_15976 [Bacillus coahuilensis m4-4]
          Length = 320

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 78/222 (35%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I +   +++              +F   T +      +  
Sbjct: 54  CTFCS-AAGSGDFAGNRADDIITQFHDIRSRMHEKWKDGKYMAYFQAFTNTHAPVDVLRE 112

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + +   V   V ++I   P  +  +  +   +        + LG+Q++ E++ R +
Sbjct: 113 KYEAVLQQEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHEKTARII 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L 
Sbjct: 170 NRAHDYETYVEGVNKLRKHGIRVCSHIINGLPLEDRDMMMETAREVSKLDVQGIKIHLLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   ++   V+L      I     +  
Sbjct: 230 LLKGTPMVKQYEKGMLEFLTQEDYVNLVCDQLEILPPEMIVH 271


>gi|306842738|ref|ZP_07475380.1| RNA modification enzyme, MiaB family [Brucella sp. BO2]
 gi|306287082|gb|EFM58587.1| RNA modification enzyme, MiaB family [Brucella sp. BO2]
          Length = 467

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   R++ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRDVRPDMALSGDFIVGFPGETDQDFEDTMQLVRE 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|225574531|ref|ZP_03783141.1| hypothetical protein RUMHYD_02608 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038262|gb|EEG48508.1| hypothetical protein RUMHYD_02608 [Blautia hydrogenotrophica DSM
           10507]
          Length = 308

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 13/194 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISS--IFFGGGTPSLIEPQN 88
           C +C              +   S   +++  +  L+  R I     +F   T +  E   
Sbjct: 46  CIFCS----AGGSGDFAASADLSITEQIESQKAMLSQKRPIRKYIAYFQAYTNTYGELSY 101

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I      +  +   V ++I   P  ++    +        +   I LG+Q++ E++ 
Sbjct: 102 LRSIFQEAISHPDI---VALSIGTRPDCLDTEILELLGHLNCQKPVWIELGLQTMHERTA 158

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R++ R +  S    A+   R +   +    I  LP +T       +Q      +  + L 
Sbjct: 159 RYIRRGYPLSCFEDAVKDLRALDIDVIVHTILGLPGETSEDILQTIQYLNRQDIQGIKLQ 218

Query: 206 QLTIEKGTLFYKMH 219
            L + KGT   K +
Sbjct: 219 LLHVLKGTDLAKDY 232


>gi|227550266|ref|ZP_03980315.1| radical SAM superfamily protein [Enterococcus faecium TX1330]
 gi|257897587|ref|ZP_05677240.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|293377845|ref|ZP_06624029.1| radical SAM protein, TIGR01212 family [Enterococcus faecium PC4.1]
 gi|227180591|gb|EEI61563.1| radical SAM superfamily protein [Enterococcus faecium TX1330]
 gi|257834152|gb|EEV60573.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|292643529|gb|EFF61655.1| radical SAM protein, TIGR01212 family [Enterococcus faecium PC4.1]
          Length = 318

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           ++     F  E+  M Q         ++F   T +    + I  
Sbjct: 50  CTFCSVSGSGDMIVAPEDPLPIQFQKEIDMMHQKWPHVQQYIVYFQNFTNTHAPVEIIKE 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +     +   V +++   P  +         +        + LG+Q+  E++ + +
Sbjct: 110 RFEQV---VNLPGVVGLSVGTRPDCLPDEVVDYLAELNERMYLWVELGLQTTFEETSKLI 166

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +++   +  ++R  L   +  + L+ +
Sbjct: 167 NRAHDYQTYLDGVAKLRKHHIRVCTHLINGLPGESLEMMKENVRRTILDSDIQGIKLHLM 226

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            + + T   + + +G L L 
Sbjct: 227 HLMRKTRMLRDYHEGRLQLM 246


>gi|27375906|ref|NP_767435.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bradyrhizobium
           japonicum USDA 110]
 gi|81740085|sp|Q89W97|MIAB_BRAJA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|27349044|dbj|BAC46060.1| bll0795 [Bradyrhizobium japonicum USDA 110]
          Length = 465

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 16/215 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + +++ +    G R ++ I      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGAEVSRPVARIVDDVKRLAD-NGVRELTLIGQNVNAYHGDGPD 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L+ +A    ++     T  ++P  V+ +    +R     +  + L VQS 
Sbjct: 222 GKSWP-LGRLLEHLAGIPGIARLRYST--SHPRDVDDSLIAAHRDLAALMPFVHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A +    I    A       S D I   P ++   +   L       
Sbjct: 279 SDRILAAMNRKHTADDYRRVIDRFRAARQDIAFSSDFIVGFPGESEQDFLATLALVTQIG 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                 ++ +   GT    M +        + +  
Sbjct: 339 YAAAYSFKYSARPGTPAADMQETVSPAEMDQRLER 373


>gi|255656429|ref|ZP_05401838.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-23m63]
 gi|296450124|ref|ZP_06891885.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
 gi|296878505|ref|ZP_06902510.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
 gi|296260887|gb|EFH07721.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
 gi|296430312|gb|EFH16154.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
          Length = 432

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 9/210 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I S + E++ +        + +          ++ +
Sbjct: 152 CDRFCTYC---IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTGIHVASYGKDLKDR 208

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +I  +LD I +   +     I +    P            K         L +QS  +++
Sbjct: 209 DI-KLLDVIKQINKIEKIERIRLSSVEPILFTDEFVNEVLKMDKVCPHYHLSLQSGCDET 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E    +   R+  P ++   D+I   P +T  +++   +      +  +
Sbjct: 268 LKRMNRRYTTLEYKTIVDRLRSKMPDVAITTDVIVGFPGETNEEFKKTYEFLKEIELSQM 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            +++ +  KGT    M    D  +      
Sbjct: 328 HIFKYSPRKGTPAATMENQVDPQMKHFRSE 357


>gi|193212385|ref|YP_001998338.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085862|gb|ACF11138.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 502

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 73/192 (38%), Gaps = 6/192 (3%)

Query: 32  CPY-CDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP-SLIEPQN 88
           CPY CDF N         +       + E+  +R+L    ++  +        S ++ + 
Sbjct: 175 CPYQCDFCNITALLGHKIRTKTSAQIIRELDALRKLGWKGTVFFVDDNFIANKSYLKKEL 234

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  ++    K  ++++        N +  +        +AG N++ +G+++ ++ +L+  
Sbjct: 235 LPQLIAW-RKANSLTNQYYTECSINLAD-DPELMDLMVQAGFNQVFIGIETPDDSALKAC 292

Query: 149 GRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           G+ H  +   +  I L ++    +    I      T + +  +++      +    +  L
Sbjct: 293 GKQHNTSRNLLDNIRLIQHAGLEVMGGFIVGFDSDTPSIFSKQIEFIQQSGIVTAMVGIL 352

Query: 208 TIEKGTLFYKMH 219
               GT  Y+  
Sbjct: 353 QALPGTKLYERM 364


>gi|322815520|gb|EFZ24162.1| acetyltransferase, putative [Trypanosoma cruzi]
          Length = 669

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 40/233 (17%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----------SSIFF 76
           C K C YC +     R Y + +   ++ +      + Q     S             +  
Sbjct: 186 CPKDCHYCPNQQGIARSYLLKEPGVLRGYRNGWDPISQFYDRASALENNGHVVDKIELII 245

Query: 77  GGGTPSLIE---PQNIA----------------LILDGIAKNWTVSSN-----VEITIEA 112
            GGT S       +                     +  + +  T + +     + +T+E 
Sbjct: 246 LGGTFSFYPKKYAEEFIAGSFYAANTYYDSAPLRPMQSLQEEITFNEDARCRVIGVTVET 305

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
            P  +  +  + +R  GV R+ LGVQ L++  L  + R    ++ I  I    +   ++ 
Sbjct: 306 RPDYINASELRRFRCLGVTRVQLGVQHLDDDILTIVNRECPTAKTILGIKRLLDAGFKVD 365

Query: 173 FDLIYALPKQTMTQWEMELQRALSYA-----VDHLSLYQLTIEKGTLFYKMHK 220
              +  LP  +  +     +   S       VD   +Y       T   + ++
Sbjct: 366 AHWMPDLPGSSYQKDREMFEYLFSLDNENFQVDQWKVYPTATVPYTKIEEWYR 418


>gi|255526258|ref|ZP_05393175.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296186252|ref|ZP_06854656.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255510038|gb|EET86361.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296049053|gb|EFG88483.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 289

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 14/205 (6%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + K  +   ++    ++   R+L     +  IF   G   +++ 
Sbjct: 25  CSHNKCSFCS----MYKDKKFKIRSLEEVYKDLHEARKLYSN--VERIFLADGDSLVLKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  IL  I + +       ++  A P  +     N  +  +K G+  + +G++S +++
Sbjct: 79  EMLEKILLKIKELYP--ECKRVSAYAAPKDILRKSENELENLKKLGLKMLYMGIESGDDE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDH 201
            L+ + +   + E I A    +N+  ++S  LI  +  +           +   S   D+
Sbjct: 137 ILQKICKGVTSGEIIEAGKKVKNVGIKLSVTLISGIGGKYKWKKNALGSAKIITSIDPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVL 226
           + +  L +E GT  Y+    GD  L
Sbjct: 197 VGILTLLVEPGTKMYEEVNSGDFEL 221


>gi|158523068|ref|YP_001530938.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511894|gb|ABW68861.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 529

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 18/225 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC +C      R+    +  +    S + EM++++ L    S S +       +   
Sbjct: 194 CPFKCIFC----VGRKMVGAKVRYRDPVSVVDEMEYLKSL----SFSQVNIADDLFTASR 245

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P    +  + + +   +  +      A    V  +  +  R+AG   +S GV++   + L
Sbjct: 246 PHCFGVCDEILRRGMNIQWSSF----ARVDLVSYDLLKKMREAGCVAVSFGVETANPEIL 301

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL---QRALSYAVDHL 202
           + + +     +  AA+    +         I  LP +T    E      ++  +      
Sbjct: 302 KTIKKGITLEQVEAAVKACADAGVLPHVSFILGLPGETPDTIEETRTFGEKIKAMGA-SY 360

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             + L    GT       +  + + +++      N     T    
Sbjct: 361 GFHLLAPFPGTEIRDRAAELGIRILTDDWRDYHANKAIVETEKAN 405


>gi|313679838|ref|YP_004057577.1| tRNA-i(6)a37 thiotransferase enzyme miab [Oceanithermus profundus
           DSM 14977]
 gi|313152553|gb|ADR36404.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanithermus profundus
           DSM 14977]
          Length = 446

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 79/240 (32%), Gaps = 20/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     V R +  + +     +  ++ + QL     +     G    S  +  
Sbjct: 153 CDHRCTYC----VVPRTRGPEVSRHPDLI--LREVEQLLEAGIVEVTLLGQNVNSYGKDD 206

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
                  D I +   +       + ++P +      +   +       + L VQ+  ++ 
Sbjct: 207 PAYPDFADLIRRVAALGVRRLRFVTSHPMNFSDRIVEAIAETPAVGQYVHLPVQAGSDRV 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R +     +  +   R   P +  S D+I   P +T   ++  L        D  
Sbjct: 267 LRRMAREYRRDYYLERVARLREALPDLVLSTDIIVGFPGETEEDFQQTLDLYDEVGFDAA 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            ++  +   GT  Y+  +     LP E     L  L +              N +++G E
Sbjct: 327 YMFIYSARPGTPSYERFE----DLPREVKVERLQRLIEKQKEWSLRR-----NQAWVGRE 377


>gi|254700783|ref|ZP_05162611.1| RNA modification protein [Brucella suis bv. 5 str. 513]
 gi|261751292|ref|ZP_05995001.1| RNA modification protein [Brucella suis bv. 5 str. 513]
 gi|261741045|gb|EEY28971.1| RNA modification protein [Brucella suis bv. 5 str. 513]
          Length = 467

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|225572829|ref|ZP_03781584.1| hypothetical protein RUMHYD_01020 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039800|gb|EEG50046.1| hypothetical protein RUMHYD_01020 [Blautia hydrogenotrophica DSM
           10507]
          Length = 368

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 17/194 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF---GGGTPSL 83
           +C   C YC         + G  N ++  +   +               F   GG  P  
Sbjct: 80  YCKNNCYYCG-------IRAGNANVVRYRMKPEEIYACCDWGYRAGFRTFVLQGGEDP-Y 131

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + + I  ++  I   +      +  I  +       ++Q Y  AG NR  L  ++   +
Sbjct: 132 FDDEKIVELVSTIRDRYP-----DCAITLSIGEKSKESYQRYFDAGANRYLLRHETACPE 186

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             R L     +    +  +   ++I  +    ++   P QT      +L     +  + +
Sbjct: 187 HYRKLHPPQLSLENRLRCLRDLKDIGYQTGCGMMVGSPYQTEENLAQDLLYIGEFRPEMV 246

Query: 203 SLYQLTIEKGTLFY 216
            +        T F 
Sbjct: 247 GIGPFIPHHDTCFR 260


>gi|213620533|ref|ZP_03373316.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 132

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 281 GAHSRVKVGSHRVAISIEKHPESWLKMVRK-----NGHAVVEKEFLSSEQQADEFLMMGL 335
           GA  R  +G+         + ++  K+++      +   +     L  ++    F++  L
Sbjct: 1   GAGGRSYLGNLHYCSPWPSNLQTSRKIIQAFIDSPDKTVINHGYLLPPDEMKRRFIIKNL 60

Query: 336 RLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV 389
              +G+S+ D++     +   D        RQG+  +   SRLR T+ GM + D +
Sbjct: 61  FFWQGLSLSDYQQYFTSDALRDFPDLERFIRQGYCYQ-NGSRLRLTETGMALSDCL 115


>gi|241206754|ref|YP_002977850.1| MiaB-like tRNA modifying enzyme [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860644|gb|ACS58311.1| MiaB-like tRNA modifying enzyme [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 424

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 89/236 (37%), Gaps = 33/236 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------ISSIFFG---G 78
           C  +C +C     +  Y  G    +       Q  + + G         + +  +G    
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPMGAVVDQARKLVDGGYREIVLTGVDATSYGCDLP 201

Query: 79  GTPSL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           G P+L  +    +  I D       +SS   I  +A+   +  +  +         + L 
Sbjct: 202 GAPTLGLLAKTLLKQIPDIRR--LRLSSIDSIEADAHLMDLIADEPRFM-----PHLHLS 254

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H  ++A+  I  AR + P MSF  D+I   P +T   ++  ++ A
Sbjct: 255 LQHGDDMILKRMKRRHLRADALRFIEDARRLRPEMSFGADMIAGFPTETEEMFDNAVRLA 314

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               + HL ++  ++  GT   +M        P  + ++      +   + H LH 
Sbjct: 315 EEANIAHLHVFPYSLRPGTPAARM--------PQLDRSLVKDRAAKLRAAGHRLHQ 362


>gi|269926079|ref|YP_003322702.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789739|gb|ACZ41880.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 432

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--------FFGGG 79
           C K C +C     V  Y+ G+E  I   + ++    +    R +  +         +G  
Sbjct: 145 CNKFCTFC-----VVPYRRGRERSIP--IPDVVEEVRFLADRGVKEVTLLGQTINHYGKD 197

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P      ++A +L  + +   +       + + P ++                 I++  
Sbjct: 198 LP---NRPDLADLLYAVHEVPGIERIRF--LTSYPRTMTDKILHAVADLPKVCEHINIPF 252

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ +   LR + R +   + I  I   R+I P +S   D+I   P +T  +++       
Sbjct: 253 QAGDNDVLRAMRRGYTIEQYIDLIDRVRSIIPGVSIATDIIVGFPNETEEKFQKTYDVLE 312

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
              +D + +   +   GT  Y+M
Sbjct: 313 QLRLDQVHIACYSPRPGTKAYEM 335


>gi|261407895|ref|YP_003244136.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
           sp. Y412MC10]
 gi|261284358|gb|ACX66329.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp.
           Y412MC10]
          Length = 519

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     +  +R+L           G    +     
Sbjct: 228 CDKFCTYC-----IVPYTRGKERS-RRPEDVIAEVRELARQGYKEITLLGQNVNAYGKDF 281

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E        D +     +         ++P   + +  +   K G  V  I L VQS   
Sbjct: 282 EDIQY-RFGDLMDDIHKIDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSGSS 340

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L+ + R +     +   H  +   P ++F  D+I   P +T  Q+E  L        D
Sbjct: 341 QVLKKMSRKYTRETYLELAHKIKKAIPNVAFTTDIIVGFPGETDEQFEETLSLVREVGYD 400

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +  +GT    M
Sbjct: 401 SAYTFIYSPREGTPAAVM 418


>gi|329923527|ref|ZP_08279002.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. HGF5]
 gi|328941235|gb|EGG37532.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. HGF5]
          Length = 519

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     +  Y  G+E   +     +  +R+L           G    +     
Sbjct: 228 CDKFCTYC-----IVPYTRGKERS-RRPEDVIAEVRELARQGYKEITLLGQNVNAYGKDF 281

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E        D +     +         ++P   + +  +   K G  V  I L VQS   
Sbjct: 282 EDIQY-RFGDLMDDIHKIDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSGSS 340

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L+ + R +     +   H  +   P ++F  D+I   P +T  Q+E  L        D
Sbjct: 341 QVLKKMSRKYTRETYLELAHKIKKAIPNVAFTTDIIVGFPGETDEQFEETLSLVREVGYD 400

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +  +GT    M
Sbjct: 401 SAYTFIYSPREGTPAAVM 418


>gi|15893169|ref|NP_360883.1| hypothetical protein RC1246 [Rickettsia conorii str. Malish 7]
 gi|81527850|sp|Q92G77|MIAB_RICCN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|15620380|gb|AAL03784.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 445

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G      
Sbjct: 162 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKG------ 215

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I  + D +     + +   +     +P  +  +  + Y      +  + L VQS  
Sbjct: 216 PADKIFSLADLLKHLAQIPNLERLRYTTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQSGS 275

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R H+       I+  R   P +  S D I   P +T   +E  L        
Sbjct: 276 NKILKAMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKY 335

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT            + SE + +    L     + +
Sbjct: 336 GQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQQELMAQQLAFN 382


>gi|56421035|ref|YP_148353.1| hypothetical protein GK2500 [Geobacillus kaustophilus HTA426]
 gi|261418482|ref|YP_003252164.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61]
 gi|319767557|ref|YP_004133058.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52]
 gi|56380877|dbj|BAD76785.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261374939|gb|ACX77682.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61]
 gi|317112423|gb|ADU94915.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52]
          Length = 449

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + + +        + +    GG  + ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEIIRQARQLVAAGYKEIVLTGIHTGGYGTDLKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L D   +   +      +IEA+   +        +++   V  + + +QS     
Sbjct: 210 NFASLLRDLDEQVPGLKRLRISSIEAS--QITDEVIDVLKRSEKIVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTVEFYAERLARLREVFPELAVTSDVIVGFPGETEDEFMETYNFIREQRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA---VDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D     + V         L +   S       E+
Sbjct: 328 HVFPYSKRTGTPAARMPNQIDEETKHDRVRRLIALSDQLAKEYASRFEGQVLEV 381


>gi|23015349|ref|ZP_00055128.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 494

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 92/249 (36%), Gaps = 13/249 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +        +    Q  ++E+ ++ +  G ++I  +        ++  +
Sbjct: 229 CPYHCSFC-CINAPFGKPSYRLWSPQVVVSEIDFLVERYGVKNIKFVDEMF----VLNKR 283

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           ++A I D +A   T   +V I       ++        +  GVN I LG++S  +     
Sbjct: 284 HVAGICDLLA---TRDYDVNIWAYGRVDTMHDELLDKLKAGGVNWICLGIESASDYVRDG 340

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     + I  +   ++    +  + ++ LP  T+ + +  +  A     +  + Y  
Sbjct: 341 AEKVFTNQDVIDTVRRIQSAGIHIIGNYVFGLPDDTIPRMQQTMDLAQELNCEFANFYSA 400

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
               G+  Y M  + +L LP      + ++ +Q       L    +S    LG      +
Sbjct: 401 MAYPGSKLYDMAVEKNLPLP-----REWHHFSQHGYETLPLANDALSAADILGFRDKAWM 455

Query: 268 NYWRYGDYI 276
           +Y+    Y+
Sbjct: 456 DYFTNPKYL 464


>gi|332993746|gb|AEF03801.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
           sp. SN2]
          Length = 477

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 68/226 (30%), Gaps = 16/226 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTPSLI 84
           C  YC F              +   L E+  +            +++++        ++ 
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVDDVLLEIAQLAGQGVREVNLLGQNVNAFRGENHDGTVC 216

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +  ++  I     +         ++P     +    Y      V+ + L VQS  +
Sbjct: 217 RFAELLELVAAIDGIDRIRYTT-----SHPVEFTDDIIDVYATIPELVDHLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R + P +S   D I   P +T   +E  +    +   D
Sbjct: 272 RILNLMKRGHTAIEYKSKIRKLRKVRPNISMSSDFIIGFPGETDADFEATMDLIQAIDYD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               +  +   GT       D       + + +    + Q      
Sbjct: 332 LSFSFIYSARPGTPAADAVDDVTEDAKKQRLYLLQQRINQQALRIA 377


>gi|113968874|ref|YP_732667.1| radical SAM domain-containing protein [Shewanella sp. MR-4]
 gi|114048989|ref|YP_739539.1| radical SAM domain-containing protein [Shewanella sp. MR-7]
 gi|113883558|gb|ABI37610.1| Radical SAM domain protein [Shewanella sp. MR-4]
 gi|113890431|gb|ABI44482.1| Radical SAM domain protein [Shewanella sp. MR-7]
          Length = 295

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 84/241 (34%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD   + +  K  +   +     ++  + +      +S +F   G    +    +  
Sbjct: 32  CSFCD--MYTQPQKAFRAQKLDKIEQDILAIAK--TGMPVSRVFLADGDAMSLPFARLEA 87

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I + I ++   V+      +  N ++         R+ G++ + +G +S +++ L  + +
Sbjct: 88  ICELINRHLPQVTRISSYCLPRNLNNKTPEQLARLRELGLSLLYVGCESGDDEVLAKIKK 147

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQLT 208
                 ++AA+   R    + S  ++  L     +        +   +   D+LS   +T
Sbjct: 148 GETFESSLAALQKIRAAGMKSSVMILNGLGGVALSQQHAINSAKLMNAAQPDYLSTLVVT 207

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +  GT        G   LP     + L+   Q++     L              S H  N
Sbjct: 208 LPLGTERMDAVFGGQFQLPD---QMGLFQEMQTLLDHLELEQ--------TIFRSDHASN 256

Query: 269 Y 269
           Y
Sbjct: 257 Y 257


>gi|323485502|ref|ZP_08090848.1| hypothetical protein HMPREF9474_02599 [Clostridium symbiosum
           WAL-14163]
 gi|323401150|gb|EGA93502.1| hypothetical protein HMPREF9474_02599 [Clostridium symbiosum
           WAL-14163]
          Length = 318

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF              I++   + +   ++   R I+  +F   T +   
Sbjct: 52  CIFCSGGGSGDF---AEPQHASVTEQIEA--AKARVSAKIKNGRYIA--YFQSYTNTYAP 104

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              +  +      +  +++   ++I      +     +  ++    +   I LG+Q++ E
Sbjct: 105 VDYLEALFREAVSHPDIAA---LSIGTRSDCLPPEVIRLLKEINKEKPVWIELGLQTIHE 161

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--D 200
            +   + R +     I A+   +     +   +I  LP +T       ++   ++    D
Sbjct: 162 STAELIRRGYELPCFIDAVRRLKEAGLTVIVHVILGLPGETEDMMLETIRFLANHTPPVD 221

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            + L  L + KGT    +++     + +    +DL      +   H +  
Sbjct: 222 GIKLQLLHVLKGTKLAALYEAAPFPVMTMEEYIDLILKCIRLLPPHIVIH 271


>gi|296282491|ref|ZP_06860489.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Citromicrobium
           bathyomarinum JL354]
          Length = 445

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC                    + E Q + +  G R I+ +   G   S    +
Sbjct: 158 CDKFCTYC---VVPYTRGAEISRPFAELVAEAQRLVE-GGAREITLL---GQNVSAWSGE 210

Query: 88  NIAL----ILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +       +   + +   +     I     +P+ ++      + +    +  + L VQ+ 
Sbjct: 211 DAKGHRTGLAGLVRELAKIDGLARIRYTTSHPADMDEEIIAAHGELDKLMPYLHLPVQAG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+H     +  +    A      +S D I   P +T  ++E  L+      
Sbjct: 271 NNRVLKAMNRSHTVESYLQLLERFRAARPDLALSGDFIVGFPGETEAEFEDTLKVVDEVR 330

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT    M       +  + +A     L +   + +
Sbjct: 331 YAQAFSFKYSPRPGTPAAGMDGQIAPDVMKDRLARLQDRLNRDQHAFN 378


>gi|49475038|ref|YP_033079.1| hypothetical protein BH02260 [Bartonella henselae str. Houston-1]
 gi|81648272|sp|Q6G4V6|MIAB_BARHE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|49237843|emb|CAF27038.1| hypothetical protein BH02260 [Bartonella henselae str. Houston-1]
          Length = 458

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 72/205 (35%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  I   + ++    +      +  I   G   +    Q
Sbjct: 175 CDKFCTFC-----VVPYTRGAE--ISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQ 227

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
           N+      + D +     +     +     +P  ++ +    +R   +    + L VQS 
Sbjct: 228 NVNGKTWRLGDLLYHLAKLDGLKRLRYTTSHPRDMDDSLIAAHRDLDILMPYLHLPVQSG 287

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H +   +  I   RN  P ++F  D I   P +T   +E  ++      
Sbjct: 288 SDRILKAMNRQHKSIHYLQLIEKIRNARPDIAFSGDFIVGFPGETDEDFEETIKLIKQVE 347

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT+   M    +
Sbjct: 348 YSSAYSFKYSPRPGTVGATMKNHVE 372


>gi|312876022|ref|ZP_07736011.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797220|gb|EFR13560.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 434

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 88/256 (34%), Gaps = 18/256 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC            +   ++S   E++ + Q      + + I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRGLKSIEEEVRRLVQKGYKEFVITGINISAYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +     +         + + L +QS  ++
Sbjct: 206 DGKVTLIDVIERVNEIEGVKRIRLSSLEPVIMNDEFIERLLGFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++  ++    +   R  +  ++F  D+I   P +T   +   L+         
Sbjct: 266 ILKLMNRHYTTAQYQGIVDRIREKWEDVAFTTDIIVGFPGETEEDFNATLEFVQKIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI---SN 255
           + +++ + +KGT  Y+M    D         +      NL          +  E+    +
Sbjct: 326 IHVFRFSPKKGTKAYEMPNQVDSKEKERRSKIMKEVAANLAYQFHKKFVGNWLEVLIEQD 385

Query: 256 HSFLGAESLHNLNYWR 271
             F G    ++ NY R
Sbjct: 386 SDFDGYYEGYSGNYIR 401


>gi|304384048|ref|ZP_07366503.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973]
 gi|304334836|gb|EFM01111.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973]
          Length = 443

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I+S + + +   +  G + I       G  S  E  
Sbjct: 164 CDYFCTYC---TIPFARGRSRNPSIESLVEQAETAARQ-GGKEIVLTGVNIGEFSTAEGL 219

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
            +  ++  +     +      +IE  P  ++        +  A +    + +QS  +  L
Sbjct: 220 GLLELVKTLDCVEGIQRFRISSIE--PDLLDDELIAYCAESRAFMPHFHIPLQSGSDAVL 277

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R+++       +   R   P   +  D++     +T   ++   +   S  +  L 
Sbjct: 278 RLMERHYDTKLFAEKVDTIRRYMPDAFIGVDVMVGARGETPEYFDETYRFLDSLDITQLH 337

Query: 204 LYQLTIEKGTLFYKMHK 220
           ++  +   GT   ++  
Sbjct: 338 VFPYSERPGTRALRIPY 354


>gi|282862292|ref|ZP_06271354.1| RNA modification enzyme, MiaB family [Streptomyces sp. ACTE]
 gi|282562631|gb|EFB68171.1| RNA modification enzyme, MiaB family [Streptomyces sp. ACTE]
          Length = 497

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 133 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 190

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 191 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGTIEGLERVRF--TSPHPRDFTDD 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  ++ L+ + R++     +  I    A      +S D+I
Sbjct: 249 VIAAMAETPNVMPQLHMPMQSGSDRILKAMRRSYRQERFLGIIEKVRAAMPDAAISTDII 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 309 VGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADM 350


>gi|206602111|gb|EDZ38593.1| Putative radical SAM family protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 479

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +        V +   +++ + E+ ++++      I  +FF        +  
Sbjct: 207 CGSKCTFCLWP-QTFSGNVYRTRSVENVIKEVAYIKKTFPG--IKELFF--------DDD 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +    D   +         ++   N  ++V+    +  + +G   + +G +S  +Q L 
Sbjct: 256 TLTEYRDRTRELSEALKPFNLSWGCNSKANVDFETLKMMKDSGCRVMVVGYESGNQQILN 315

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +A      A  +  ++    I+ LP +T    E  +Q A    ++ L +  
Sbjct: 316 NVKKGIRIEQATEFTRNAHQLGMKIHGTFIFGLPGETPQTIEETIQFACDMDIETLQVSL 375

Query: 207 LTIEKGTLFYK 217
            +   GT FY 
Sbjct: 376 ASPYPGTHFYN 386


>gi|126180333|ref|YP_001048298.1| radical SAM domain-containing protein [Methanoculleus marisnigri
           JR1]
 gi|125863127|gb|ABN58316.1| Radical SAM domain protein [Methanoculleus marisnigri JR1]
          Length = 490

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 20/197 (10%)

Query: 28  CVKKCPYCDFN------SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C +C +        +  R      +  +     +  ++++       +I       
Sbjct: 213 CPFHCTFCSWPENLMGRKYRSRTADNIVDEFEYICQNLPEVKEIFIEDDTYTINK----- 267

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                    L+LD   K      ++  +  A  ++++ +  Q  + AG   + +G +S  
Sbjct: 268 --------NLVLDVCRKIKERKLDITWSCNAR-ATLDYSTLQEMKSAGCRLLIVGYESGN 318

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L+ + +     +  A    A+     +  D I  LP +T    E  L+       + 
Sbjct: 319 DEILKTIRKGVGTQQMRAFTRDAKRAKLMIHGDFIIGLPGETNETAEQTLKFIRELKPNI 378

Query: 202 LSLYQLTIEKGTLFYKM 218
           L +   T   GT FY  
Sbjct: 379 LQVAVATPIPGTKFYDW 395


>gi|306843571|ref|ZP_07476172.1| RNA modification enzyme, MiaB family [Brucella sp. BO1]
 gi|306276262|gb|EFM57962.1| RNA modification enzyme, MiaB family [Brucella sp. BO1]
          Length = 467

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   R++ P   +S D I   P +T   +E  ++    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRDVRPDMALSGDFIVGFPGETDQDFEDTMRLVRE 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|253576873|ref|ZP_04854198.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251843740|gb|EES71763.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 352

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C + C YC     +R      E +  S    ++  R+       + +   G  P     
Sbjct: 61  YCRRNCLYCG----LRAGNREAERYRLSPEEILECCREGYELGFRTFVLQSGEDP-WYTA 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +A ++  I   +  +      I  +    E   ++   +AG +R  +  ++   +  +
Sbjct: 116 DLLAALIREIKAEFPDA-----AITLSIGEREAETYRLLYEAGADRFLMRHETASRRLYQ 170

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L  + +       +   ++I  ++    +  LP QT      +L    +   D + +  
Sbjct: 171 ALHPSMSFDHRRQCLETLQSIGYQVGAGFMVGLPGQTAEDLAEDLNYLQTLNPDMIGIGP 230

Query: 207 LTIEKGTLFYK 217
                 T    
Sbjct: 231 FIPHDQTPLGN 241


>gi|254411897|ref|ZP_05025673.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181619|gb|EDX76607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Microcoleus
           chthonoplastes PCC 7420]
          Length = 451

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    ++   EM  + Q  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPEAIRAEMAELGQQ-GYKEITLLGQNIDAYGRDLPG 212

Query: 83  LI-EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    ++   + D +     V S   I     +P        +  ++         +  Q
Sbjct: 213 VTESGRHQHTLTDLLYYVHDVPSIERIRFATSHPRYFTERLIRACKELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R+  P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNDILKAMARGYTQEKYRRIIDTIRDYMPDASISADAIVGFPGETEAQFENTLKLVED 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IEFDQLNTAAYSPRPGTP 350


>gi|160933769|ref|ZP_02081157.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753]
 gi|156867646|gb|EDO61018.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753]
          Length = 429

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 69/197 (35%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   ++    E + +        + +    G   S     
Sbjct: 152 CNRFCSYC---IIPYSRGRVRSKPLEELTREARTLAASGYREIVLT----GINLSCYGQD 204

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           +   + D +     +     + +    P  +E+   +     +    +  L +QS  + +
Sbjct: 205 SGLGLWDAVEAVCGLPEVERVRLGSLEPEQMELPVLERLARQEKLCPQFHLSLQSGCDAT 264

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++ A+E  + ++  R +F    ++ D++     +T   +E  L  A       +
Sbjct: 265 LKRMNRHYTAAEYESIVNNIRGVFDNPSVTTDMMVGFAGETPEDFEESLNFARKIGFAKV 324

Query: 203 SLYQLTIEKGTLFYKMH 219
            ++  +   GT   +M 
Sbjct: 325 HVFAYSRRPGTAADRMP 341


>gi|260431178|ref|ZP_05785149.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415006|gb|EEX08265.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 439

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 26/237 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  L E Q + +  G R I+    ++    G    
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREAQDLVER-GVREITLLGQNVNAYHGA--- 211

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
             P     +   I +   +     I     +P+ +  +  + +   +  +  + L VQS 
Sbjct: 212 -GPNGDMTLAGLIWELNRIDGLERIRFTTSHPNDMTDDLIEAHGTCEKLMPYLHLPVQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H A   +  I   R   P +  S D I   P++T   ++  L       
Sbjct: 271 SDRILKRMNRSHTAESYLRLIERIREARPDILMSGDFIVGFPEETEEDFQATLDLVEEVR 330

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
             +   ++ +   GT   +         P  +       L Q + +    H  EI +
Sbjct: 331 YGYAYSFKYSTRPGTPAAER--------PQVDPQAADDRL-QRLQAVITRHQREIQD 378


>gi|124515867|gb|EAY57376.1| putative radical SAM family protein [Leptospirillum rubarum]
          Length = 479

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +        V +   +++ + E+ ++++      I  +FF        +  
Sbjct: 207 CGSKCTFCLWP-QTFSGNVYRTRSVENVIKEVAYIKKTFPG--IKELFF--------DDD 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +    D   +         ++   N  ++V+    +  + +G   + +G +S  +Q L 
Sbjct: 256 TLTEYRDRTRELSEALKPFNLSWGCNSKANVDFETLKMMKDSGCRVMVVGYESGNQQILN 315

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +A      A  +  ++    I+ LP +T    E  +Q A    ++ L +  
Sbjct: 316 NVKKGIRIEQATEFTRNAHQLGMKIHGTFIFGLPGETPQTIEETIQFACDMDIETLQVSL 375

Query: 207 LTIEKGTLFYK 217
            +   GT FY 
Sbjct: 376 ASPYPGTHFYN 386


>gi|124485623|ref|YP_001030239.1| hypothetical protein Mlab_0801 [Methanocorpusculum labreanum Z]
 gi|124363164|gb|ABN06972.1| Radical SAM domain protein [Methanocorpusculum labreanum Z]
          Length = 366

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM--RQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   +     +  +    ++ ++  +     +   P + +     G  P   +
Sbjct: 149 CPFSCAYC--QTPCLHGRKMRHRSREAIVSMAEKYQDARFVTPNAFAYGSADGRVP---D 203

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQS 144
            + +  +L  + KN           E  P  V     +   +   N ++  G QS  +  
Sbjct: 204 VEKLRRLLSSMPKNNIYFGT--FPSEVRPEFVIQETAELITEFCSNTKLHFGAQSGSDAV 261

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL---QRALSYAVDH 201
           LR +GR H   +  +A+   + +      D+I+  P  +    E  L   +    Y   H
Sbjct: 262 LRKMGRGHTVVDVYSALETCKKVGLTPVVDVIFGFPFASDEDEEATLSLVREVTRYGTAH 321

Query: 202 LSLYQLTIEKGTLF 215
           +  + LT   GT  
Sbjct: 322 V--HYLTPLPGTPL 333


>gi|256060114|ref|ZP_05450296.1| RNA modification protein [Brucella neotomae 5K33]
 gi|261324091|ref|ZP_05963288.1| RNA modification protein [Brucella neotomae 5K33]
 gi|261300071|gb|EEY03568.1| RNA modification protein [Brucella neotomae 5K33]
          Length = 467

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  -------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 VEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|326386707|ref|ZP_08208328.1| tRNA-i(6)A37 modification enzyme MiaB [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326208760|gb|EGD59556.1| tRNA-i(6)A37 modification enzyme MiaB [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 445

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 77/250 (30%), Gaps = 33/250 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----------FF 76
           C K C YC       R       +    + E + + +  G R I+ +             
Sbjct: 158 CDKFCTYC--VVPYTRGAEISRPYAD-LVEEARLLVE-GGAREITLLGQNVNAWHGEDDK 213

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           G           +A + D     +T S   ++      +    +         +  + L 
Sbjct: 214 GRTIGLAGLAAELARLPDLARIRYTTSHPADMDDALIEAHGTNDKL-------MPFLHLP 266

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L+ + R+H+A   +  I   R   P ++   D I   P +T  ++   L   
Sbjct: 267 VQSGNDRVLKAMNRSHSAESYLKIIERVRAARPDIALSGDFIVGFPGETEAEFADTLALI 326

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +        ++ +   GT    M       +  + +      +T+   +          
Sbjct: 327 DATRYAQAFSFKYSPRPGTPAATMDDQIAAEIMDDRLKRLQTAITRDQLAF--------- 377

Query: 255 NHSFLGAESL 264
           N + +G    
Sbjct: 378 NRASVGKRCQ 387


>gi|312875820|ref|ZP_07735810.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797301|gb|EFR13640.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 471

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 83/265 (31%), Gaps = 31/265 (11%)

Query: 19  LGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPR 69
           +  +V+  + C   C YC            +    +  + E++ + Q        L    
Sbjct: 181 VSAFVNIIYGCNNFCSYC---IVPYVRGRERSRRPEEIIYEIEQLAQNGVKEVTLLGQNV 237

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +      G G            +L+ + +   +     +T  ++P  +        R   
Sbjct: 238 NSYGKDLGNGIT-------FPKLLEKVNEIKGIERIRFVT--SHPKDLSDELIVAMRDLE 288

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                I L VQS   + L+ + R++   + +  +   +   P ++   D+I   P +T  
Sbjct: 289 KVCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDE 348

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +E  L        D    +  +  +GT   KM       +  +     +  + +     
Sbjct: 349 DFEDTLDVCRKVEFDSAYTFIYSKRRGTPAEKMPNQVPDDIKHQRFQQLVKLIEEIALKK 408

Query: 246 HGL---HAYEISNHSFLGAESLHNL 267
           +       YEI      G    +NL
Sbjct: 409 NRQMLGKTYEI---LIDGRSKRNNL 430


>gi|222098978|ref|YP_002533546.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermotoga neapolitana
           DSM 4359]
 gi|221571368|gb|ACM22180.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermotoga neapolitana
           DSM 4359]
          Length = 443

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 10/224 (4%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           +H   C + C YC       R +              +   Q     +            
Sbjct: 147 IH--GCDRFCTYC--IVPYTRGRERSRPMADILEEVKKLAEQGYREVTFLGQNVDAYGKD 202

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L +  ++A +L+  +K   +       + + P+       +   K       + L VQS 
Sbjct: 203 LKDGSSLAKLLEEASKIEGIERIWF--LTSYPTDFSDELIEVIAKNPKVAKSVHLPVQSG 260

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +   E +A +   R+  P ++   D+I   P +T   +   +       
Sbjct: 261 SNRILKLMNRRYTKEEYLALLEKIRSKVPEVAISSDIIVGFPTETEEDFMETVDLVEKAQ 320

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            + L+L   +  +GT+ +K +KD             L NL + I
Sbjct: 321 FERLNLAIYSPREGTVAWKYYKDDVPYEEKVRRMQFLMNLQKRI 364


>gi|148269423|ref|YP_001243883.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Thermotoga
           petrophila RKU-1]
 gi|170288080|ref|YP_001738318.1| RNA modification protein [Thermotoga sp. RQ2]
 gi|229891014|sp|A5IJD4|MIAB_THEP1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891017|sp|B1L8F3|MIAB_THESQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|147734967|gb|ABQ46307.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermotoga petrophila
           RKU-1]
 gi|170175583|gb|ACB08635.1| RNA modification enzyme, MiaB family [Thermotoga sp. RQ2]
          Length = 443

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 76/222 (34%), Gaps = 8/222 (3%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
              C + C YC       R +              +  +Q     +            L 
Sbjct: 147 IFGCDRFCTYC--IVPYTRGREKSRPMEDILEEVRELAKQGYREVTFLGQNVDAYGKDLK 204

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +  ++A +L+  +K   +       + + P+       +   +       + L VQS   
Sbjct: 205 DGSSLAKLLEEASKIEGIERIWF--LTSYPTDFSDELIEVIARNPKVAKSVHLPVQSGSN 262

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R++   E +A +   R+  P ++   D+I   P +T   +   +        +
Sbjct: 263 RILKLMNRSYTKEEYLALLERIRSKVPDVAISSDIIVGFPTETEEDFMETIDLVEKAQFE 322

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L+L   +  KGT+ +K +KD             L NL + I
Sbjct: 323 RLNLAIYSPRKGTVAWKHYKDEVPYEEKVRRMQFLMNLQKRI 364


>gi|23503001|ref|NP_699128.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella suis
           1330]
 gi|161620062|ref|YP_001593949.1| RNA modification protein [Brucella canis ATCC 23365]
 gi|225626520|ref|ZP_03784559.1| RNA modification enzyme, MiaB family protein [Brucella ceti str.
           Cudo]
 gi|254705152|ref|ZP_05166980.1| RNA modification protein [Brucella suis bv. 3 str. 686]
 gi|254707331|ref|ZP_05169159.1| RNA modification protein [Brucella pinnipedialis M163/99/10]
 gi|254709128|ref|ZP_05170939.1| RNA modification protein [Brucella pinnipedialis B2/94]
 gi|254713447|ref|ZP_05175258.1| RNA modification protein [Brucella ceti M644/93/1]
 gi|254716197|ref|ZP_05178008.1| RNA modification protein [Brucella ceti M13/05/1]
 gi|256030653|ref|ZP_05444267.1| RNA modification protein [Brucella pinnipedialis M292/94/1]
 gi|256158655|ref|ZP_05456538.1| RNA modification protein [Brucella ceti M490/95/1]
 gi|256254059|ref|ZP_05459595.1| RNA modification protein [Brucella ceti B1/94]
 gi|260169557|ref|ZP_05756368.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella sp.
           F5/99]
 gi|260567379|ref|ZP_05837849.1| RNA modification protein [Brucella suis bv. 4 str. 40]
 gi|261217971|ref|ZP_05932252.1| RNA modification protein [Brucella ceti M13/05/1]
 gi|261221200|ref|ZP_05935481.1| RNA modification protein [Brucella ceti B1/94]
 gi|261314813|ref|ZP_05954010.1| RNA modification protein [Brucella pinnipedialis M163/99/10]
 gi|261316628|ref|ZP_05955825.1| RNA modification protein [Brucella pinnipedialis B2/94]
 gi|261321179|ref|ZP_05960376.1| RNA modification protein [Brucella ceti M644/93/1]
 gi|261755857|ref|ZP_05999566.1| RNA modification protein [Brucella suis bv. 3 str. 686]
 gi|261759085|ref|ZP_06002794.1| RNA modification protein [Brucella sp. F5/99]
 gi|265987700|ref|ZP_06100257.1| RNA modification protein [Brucella pinnipedialis M292/94/1]
 gi|265997161|ref|ZP_06109718.1| RNA modification protein [Brucella ceti M490/95/1]
 gi|294851378|ref|ZP_06792051.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella sp. NVSL
           07-0026]
 gi|81751814|sp|Q8FXU4|MIAB_BRUSU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890452|sp|A9M9Y3|MIAB_BRUC2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|23349040|gb|AAN31043.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161336873|gb|ABX63178.1| RNA modification enzyme, MiaB family [Brucella canis ATCC 23365]
 gi|225618177|gb|EEH15220.1| RNA modification enzyme, MiaB family protein [Brucella ceti str.
           Cudo]
 gi|260156897|gb|EEW91977.1| RNA modification protein [Brucella suis bv. 4 str. 40]
 gi|260919784|gb|EEX86437.1| RNA modification protein [Brucella ceti B1/94]
 gi|260923060|gb|EEX89628.1| RNA modification protein [Brucella ceti M13/05/1]
 gi|261293869|gb|EEX97365.1| RNA modification protein [Brucella ceti M644/93/1]
 gi|261295851|gb|EEX99347.1| RNA modification protein [Brucella pinnipedialis B2/94]
 gi|261303839|gb|EEY07336.1| RNA modification protein [Brucella pinnipedialis M163/99/10]
 gi|261739069|gb|EEY27065.1| RNA modification protein [Brucella sp. F5/99]
 gi|261745610|gb|EEY33536.1| RNA modification protein [Brucella suis bv. 3 str. 686]
 gi|262551629|gb|EEZ07619.1| RNA modification protein [Brucella ceti M490/95/1]
 gi|264659897|gb|EEZ30158.1| RNA modification protein [Brucella pinnipedialis M292/94/1]
 gi|294819967|gb|EFG36966.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella sp. NVSL
           07-0026]
          Length = 467

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|85713017|ref|ZP_01044055.1| 2-methylthioadenine synthetase [Idiomarina baltica OS145]
 gi|85693186|gb|EAQ31146.1| 2-methylthioadenine synthetase [Idiomarina baltica OS145]
          Length = 476

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 27/221 (12%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    +     +V     C K   YC F              +   + E+  + +  G
Sbjct: 137 DRLPDPKAEGASAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPVDDVIYEIAQLAEQ-G 192

Query: 68  PRSISSI----------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
            R ++ +           F G           A +L  +A    +      T  ++P   
Sbjct: 193 VREVNLLGQNVNAYRGEHFDG------SVCRFAELLHLVAAIDGIDRIRYTT--SHPVEF 244

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-- 173
             +  + Y      V+ + L VQS  ++ L  + R H A E  + I   +   P ++   
Sbjct: 245 TDDIIEAYTTIPELVSHLHLPVQSGSDRVLTMMKRGHTALEYKSKIRALKKARPDIAMSS 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           D I   P +T   ++  +    +   D    +  +   GT 
Sbjct: 305 DFIIGFPGETDADFQATMDLIQAIDFDMSFSFIYSARPGTP 345


>gi|117919457|ref|YP_868649.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella sp.
           ANA-3]
 gi|229890655|sp|A0KTX4|MIAB_SHESA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|117611789|gb|ABK47243.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella sp. ANA-3]
          Length = 474

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GGICTFAELLRYVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P +T   +   ++     A DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGETKEDFADTMKLIEDVAFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVDMEEKKQRLAILQDRITQQAMRY 376


>gi|168185423|ref|ZP_02620058.1| biotin synthase [Clostridium botulinum C str. Eklund]
 gi|169296295|gb|EDS78428.1| biotin synthase [Clostridium botulinum C str. Eklund]
          Length = 348

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 16/194 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC    FN  V RY++  E+ +       +      G R++  +  GG  P  
Sbjct: 61  YCKNTCTYCGIRVFNKKVDRYRLSLEDILNCCSEGYKL-----GYRTV--VLQGGEDP-Y 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I + +      +  +  +       +++ Y  AG +R  L  ++  + 
Sbjct: 113 FTDDKIVEIVKNIKEKFK-----DCAVTLSIGEKSYESYKKYYDAGADRYLLRHETASKT 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L    +       +   + I  ++    +  +P QT   +  +L          + 
Sbjct: 168 LYEKLHPGMSFENRRRCLRDLKEIGYQVGAGFMIGIPGQTNEDFVKDLLFLKELEPHMVG 227

Query: 204 LYQLTIEKGTLFYK 217
           +     +  T    
Sbjct: 228 IGPFIPQCDTPLGN 241


>gi|229587170|ref|YP_002845671.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
           africae ESF-5]
 gi|228022220|gb|ACP53928.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia africae ESF-5]
          Length = 445

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G      
Sbjct: 162 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKG------ 215

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I  + D +     + +   +     +P  +  +  + Y      +  + L VQS  
Sbjct: 216 PADKIFSLADLLKHLAQIPNLERLRYTTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQSGS 275

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R H+       I+  R   P +  S D I   P +T   +E  L        
Sbjct: 276 NKILKAMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKY 335

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT            + SE + +    L     + +
Sbjct: 336 GQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQQELMAQQLAFN 382


>gi|148559930|ref|YP_001259948.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella ovis
           ATCC 25840]
 gi|229890453|sp|A5VTA1|MIAB_BRUO2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|148371187|gb|ABQ61166.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella ovis ATCC 25840]
          Length = 467

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|85058789|ref|YP_454491.1| putative tRNA-thiotransferase [Sodalis glossinidius str.
           'morsitans']
 gi|123519811|sp|Q2NUT9|MIAB_SODGM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|84779309|dbj|BAE74086.1| putative tRNA-thiotransferase [Sodalis glossinidius str.
           'morsitans']
          Length = 474

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 23/226 (10%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFGGGTPSL 83
           YC F                  L E+  +    G R ++ +           + GG  + 
Sbjct: 160 YCSFCVVPYTRGEEVSRPCDDILFEIAQLADQ-GVREVNLLGQNVNAYRGASYDGGICTF 218

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I     +       I ++P     +    YR     V+ + L VQS  
Sbjct: 219 ---AELLRLVAAIDGIDRIRY-----ITSHPIEFTDDIIDVYRDTPELVSFVHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   +E  +Q       
Sbjct: 271 DRILTMMKRAHTALEYKSIIRRLRKARPDIQISSDFIIGFPGETQQDFEQTMQLIADVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           D    +  +   GT    M  +       + + +    +TQ     
Sbjct: 331 DMSFSFIYSARPGTPAADMVDNVSEEEKKQRLHILQERITQQAMQY 376


>gi|238650870|ref|YP_002916725.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str.
           Rustic]
 gi|238624968|gb|ACR47674.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str.
           Rustic]
          Length = 445

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G      
Sbjct: 162 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKG------ 215

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I  + D +     + +   +     +P  +  +  + Y      +  + L VQS  
Sbjct: 216 PADKIFSLADLLKHLAQIPNLERLRYTTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQSGS 275

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R H+       I+  R   P +  S D I   P +T   +E  L        
Sbjct: 276 NKILKAMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKY 335

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT            + SE + +    L     + +
Sbjct: 336 GQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQQELMAQQLAFN 382


>gi|88798164|ref|ZP_01113750.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Reinekea sp. MED297]
 gi|88778940|gb|EAR10129.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Reinekea sp. MED297]
          Length = 452

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 84/245 (34%), Gaps = 21/245 (8%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +++    S+ +  +V     C K C +C       R +     F       +  +  L G
Sbjct: 142 DHLPAPKSDGVSAFVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDD----VIAEVAHLAG 195

Query: 68  PRSISSIFFGGGTPSLI-------EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +  I F G   +            ++A ++   A+   +      T  ++P     +
Sbjct: 196 -QGVREINFLGQNVNAYRGARHDGGEADLAELITLAAQIDGIDRIRFTT--SHPVEFTES 252

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
               Y      V+ + L VQS   + L  + R H   E I  +   R   P +SF  D I
Sbjct: 253 LIDVYNDVPELVSHLHLPVQSGSNRILAAMKRGHEVDEYIDKMERIRLNRPDISFSSDFI 312

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
              P +T   +E  +    +   DH   +  +   GT    +  +    +  + + +   
Sbjct: 313 IGFPGETDQDFEDTMNLIQTIGFDHSFSFVYSARPGTPASDLPDETPESVKKQRLQILQQ 372

Query: 237 NLTQS 241
            +TQ 
Sbjct: 373 RITQQ 377


>gi|238795390|ref|ZP_04638905.1| hypothetical protein ymoll0001_9790 [Yersinia mollaretii ATCC
           43969]
 gi|238720509|gb|EEQ12310.1| hypothetical protein ymoll0001_9790 [Yersinia mollaretii ATCC
           43969]
          Length = 486

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 67/223 (30%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT-PSLIEP 86
           C K C +C       R +              Q   Q     ++          P+    
Sbjct: 169 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGPTY--D 224

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +I    + +     +     +     +P     +    YR     V+ + L VQS  ++
Sbjct: 225 GDICSFAELLRLVAAIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 284

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  L+       D 
Sbjct: 285 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQHDFEQTLKLVADIHFDT 344

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    +TQ    
Sbjct: 345 SYSFIYSSRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 387


>gi|222053725|ref|YP_002536087.1| hypothetical protein Geob_0621 [Geobacter sp. FRC-32]
 gi|221563014|gb|ACM18986.1| conserved hypothetical protein [Geobacter sp. FRC-32]
          Length = 329

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 78/239 (32%), Gaps = 13/239 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC  +       +   +  +      + M +    +     +F   + +   P  +  
Sbjct: 46  CIYCGGSGSGSFGIIRGASIAEQLEHGKEVMTRKYKAKKF-LAYFQPYSNTFATPGRLQA 104

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + D   +   V   V + +   P  +                  + LG+QS  +++L  +
Sbjct: 105 LYD---QALAVEDVVGLIVGTRPDCLPAETLDVLASYARKTYFWLELGLQSHLDRTLSLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+ +  +  I   +    ++   +I  LP +T  +     Q      VD + L+ L 
Sbjct: 162 RRGHDFASFVRGIKECKARQIKVCAHIILGLPGETREEMLAGAQVLNDLGVDGVKLHLLH 221

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           + + T     ++ G + +   +  V L      +          IS     G  +  +L
Sbjct: 222 VMRDTALADEYQQGRVRILDRDEYVGLVCDFLELLDPA------ISVQRLTGDGNRDHL 274


>gi|242280283|ref|YP_002992412.1| MiaB-like tRNA modifying enzyme [Desulfovibrio salexigens DSM 2638]
 gi|242123177|gb|ACS80873.1| MiaB-like tRNA modifying enzyme [Desulfovibrio salexigens DSM 2638]
          Length = 429

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 67/214 (31%), Gaps = 30/214 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC                +   L E+  +           +   G   S     
Sbjct: 146 CSHRCTYC---IVPITRGPSVSRAVDDVLKEISRLLAAG----FREMIISGINLS----- 193

Query: 88  NIALILDGIAKNWTVSSNVEITI-------------EANPSSVEVNNFQGYRKAG--VNR 132
           +     +     W +   +E                   P  ++    + + K+     +
Sbjct: 194 HYGREFEEKIDFWDLMERIEDEFGQEWGGRARLRISSLEPGQLKERALEIFAKSKLICPQ 253

Query: 133 ISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
           + L +QS + Q L+ +GR H    + +  +   + ++P      D++   P +T  ++  
Sbjct: 254 LHLSLQSGDRQVLKRMGRGHYKPEDVLVFLDKLKEVWPVFGLGADILTGFPGETEEEFNN 313

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            L+      + +  ++  +I  GT    M    D
Sbjct: 314 TLEFCRKLPLSYAHVFPYSIRPGTAAASMKGQLD 347


>gi|300853988|ref|YP_003778972.1| putative oxidoreductase [Clostridium ljungdahlii DSM 13528]
 gi|300434103|gb|ADK13870.1| predicted oxidoreductase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC                    + E++ + +      I S I        +   
Sbjct: 177 CNRFCSYCA---IPFARGAVCSKSPDKIIEEVEKLSRNNFKEIILSGIHIASYGTDIDGD 233

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
            N+  IL  I K   +      +I  +P        +     +       L +QS  +++
Sbjct: 234 WNLLRILQEIDKVKGIDRVRIGSI--DPQFFTEGVIEKMSKLEKLCPHFHLSLQSGCDET 291

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +  SE    ++  RN     S   D+I   P +T  ++          A+  +
Sbjct: 292 LKRMNRRYTTSEYEKIVYEIRNAIENASITTDIIVGFPGETEEEFNKTYDFLNRIALSKM 351

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            +++ +   GT    M    D
Sbjct: 352 HVFKYSRRSGTKAADMPGQVD 372


>gi|255994803|ref|ZP_05427938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
           49989]
 gi|255993516|gb|EEU03605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
           49989]
          Length = 484

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 79/252 (31%), Gaps = 37/252 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   +     E + + +      + +     G  + +  +
Sbjct: 195 CDRYCTYC---IIAHVRGQVRSKKVDDIYEEAKKLVEDGYREIVLT-----GINTALYGE 246

Query: 88  NIAL-----ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           ++       ++D I K  T+  +  I I    P+ V        +          L VQS
Sbjct: 247 DLHQGIGKSMVDVINKISTIPGDFRIRIGSLEPTVVNKEYINLIKNLPKLCRHAHLSVQS 306

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
                L  +GRN+   E I  + + R+      +S D+I   P ++   +E  L      
Sbjct: 307 GSNDVLAAMGRNYTREEYIDIVDMLRDAHGNYGISTDIIVGFPGESEKDFEQSLMLVEKI 366

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
               + +++ +   GT                  A    N+ +       +   E+S  +
Sbjct: 367 PFTKVHIFRYSERAGTP-----------------AAGFKNMIKEEIKTRRMK--ELSTIA 407

Query: 258 FLGAESLHNLNY 269
                  H LN 
Sbjct: 408 KDSMRRFHELNM 419


>gi|70726162|ref|YP_253076.1| hypothetical protein SH1161 [Staphylococcus haemolyticus JCSC1435]
 gi|68446886|dbj|BAE04470.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 319

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 73/222 (32%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I+    +++              +F   T +    + +  
Sbjct: 52  CTFCS-AAGSGDFAGNRADPIEVQFQQIKDRMHEKWSEGKYIAYFQAFTNTHAPVEVLKE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + K   V   V ++I   P  +  +  +   +        + LG+Q++ +++   +
Sbjct: 111 KYEPVLKEEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHQETTDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R     +   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMQTYYDGVAKLRKHNINVCTHIINGLPGEDYEMMMETAREVAQMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   S+     L      I     +  
Sbjct: 228 LLKGTPMVKQYEKGMLEFMSQENYTKLVCDQLEILPPEMIIH 269


>gi|157826266|ref|YP_001493986.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford]
 gi|229890630|sp|A8GQ03|MIAB_RICAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157800224|gb|ABV75478.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford]
          Length = 445

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 74/228 (32%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----LTGPRSISSIFFGGGTPS 82
           C K C +C       R      N  Q +   +Q +       +   +++++  + G    
Sbjct: 162 CDKFCTFC--VVPYTRGAEFSRNVEQVYREALQVVSGGAKEIMLLGQNVNAYNWKGSADK 219

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +    ++   L  I     +       + ++P  +  +  Q +      +  + L VQS 
Sbjct: 220 IFSLADLLKHLAQIPNLERLRY-----MTSHPIDMTDDLIQLHGTEPKLMPFLHLPVQSG 274

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R H+       I+  R   P +  S D I   P +T   +E  L       
Sbjct: 275 SNKILKAMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVK 334

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT            + SE + +    L     + +
Sbjct: 335 YGQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQKELMDQQLACN 382


>gi|331001262|ref|ZP_08324888.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Parasutterella
           excrementihominis YIT 11859]
 gi|329568989|gb|EGG50785.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Parasutterella
           excrementihominis YIT 11859]
          Length = 441

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 24/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                ++  L E+  +    G + ++ +      + G  P 
Sbjct: 158 CSKYCSYC---VVPYTRGEEFSRPVEDVLVEIAQLAAQ-GVKEVTLLGQNVNAYRGEGPD 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P        + YRK  +  N + L VQ+ 
Sbjct: 214 G-EIVDFALLLEYVAEIDGIERIRYTT--SHPKEFTNRLIEAYRKIPILANHVHLPVQAG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I   R I P +S   D I   P +T   +E  +       
Sbjct: 271 SDRVLAGMKRGYTILEYKSIIRKLRAIRPDISIATDFIVGFPNETEEDFEKTMNLIKEIK 330

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            D    +  +   GT   +        LP +          Q + + +  HA EIS
Sbjct: 331 FDASFSFVYSKRPGTPAAE--------LPDDTPQSVKLERLQRLQALNTQHAQEIS 378


>gi|331269503|ref|YP_004395995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
           BKT015925]
 gi|329126053|gb|AEB75998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
           BKT015925]
          Length = 452

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 72/230 (31%), Gaps = 20/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E         +  ++ L           G    S    +
Sbjct: 171 CNNFCSYC-----IVPYVRGRERSRDP-QNIIDEIKDLVSKGYKEITLLGQNVNSYGKGL 224

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            P+ N A +L  + K   +       + ++P  V     +   +      +    +QS  
Sbjct: 225 TPEMNFADLLRMVNKIEGLERIRF--MTSHPKDVSDELIKAMAECEKVCEQGHFALQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +  +   R   P +    D+I   P +T   ++  L        
Sbjct: 283 TKILEKMNRKYTREDYLNLVKKLRAAMPNVGISTDIIVGYPGETEEDFQETLSIVKEIEF 342

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           D    +  +  +GT   K     +  +P +   V    L ++I       
Sbjct: 343 DSAFTFIYSKREGTPAAK----HEDQVPDDVKHVRFNRLVEAINEIMSRK 388


>gi|303256206|ref|ZP_07342222.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Burkholderiales bacterium
           1_1_47]
 gi|302860935|gb|EFL84010.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Burkholderiales bacterium
           1_1_47]
          Length = 441

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 24/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                ++  L E+  +    G + ++ +      + G  P 
Sbjct: 158 CSKYCSYC---VVPYTRGEEFSRPVEDVLVEIAQLAAQ-GVKEVTLLGQNVNAYRGEGPD 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P        + YRK  +  N + L VQ+ 
Sbjct: 214 G-EIVDFALLLEYVAEIDGIERIRYTT--SHPKEFTNRLIEAYRKIPILANHVHLPVQAG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I   R I P +S   D I   P +T   +E  +       
Sbjct: 271 SDRVLAGMKRGYTILEYKSIIRKLRAIRPDISIATDFIVGFPNETEEDFEKTMNLIKEIK 330

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            D    +  +   GT   +        LP +          Q + + +  HA EIS
Sbjct: 331 FDASFSFVYSKRPGTPAAE--------LPDDTPQSVKLERLQRLQALNTQHAQEIS 378


>gi|294500858|ref|YP_003564558.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium QM
           B1551]
 gi|294350795|gb|ADE71124.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium QM
           B1551]
          Length = 520

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 85/235 (36%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R L   G + I+    ++   G   
Sbjct: 232 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDF 285

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D I K   +         ++P   +    +   K G  V+ I L VQS
Sbjct: 286 EDMT-YGLGDLMDEIRK---IDVARIRFTTSHPRDFDDRLIEVLAKGGNLVDHIHLPVQS 341

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  +      
Sbjct: 342 GSSDILKIMARKYSREHYLELVRKIKEAIPTASLTTDIIVGFPNETDEQFEETMSLYREV 401

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  +    +   +   N   +  SA  L  YE
Sbjct: 402 EFDSAYTFIYSPREGTPAAKMQDNVPME--VKKERLQRLNALVNEISAKKLKEYE 454


>gi|157829079|ref|YP_001495321.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933804|ref|YP_001650593.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
           rickettsii str. Iowa]
 gi|229890634|sp|B0BVC7|MIAB_RICRO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890635|sp|A8GTT8|MIAB_RICRS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157801560|gb|ABV76813.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908891|gb|ABY73187.1| tRNA 2-methylthioadenosine synthase [Rickettsia rickettsii str.
           Iowa]
          Length = 445

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G      
Sbjct: 162 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKG------ 215

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I  + D +     + +   +     +P  +  +  + Y      +  + L VQS  
Sbjct: 216 PADKIFSLADLLKHLAQIPNLERLRYTTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQSGS 275

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R H+       I+  R   P +  S D I   P +T   +E  L        
Sbjct: 276 NKILKAMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKY 335

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT            + SE + +    L     + +
Sbjct: 336 GQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQQELMAQQLAFN 382


>gi|307266431|ref|ZP_07547967.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918539|gb|EFN48777.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 455

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 21/235 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGV---------YVHWP-FCVKKCPYCDFNSHVRRYKVGQENF 51
           + LS   N MT +     GV         Y+     C + C YC     +   +    + 
Sbjct: 136 QKLSVVNNIMTQKEYEEFGVTAYTERTRAYIKIQDGCNQYCTYC----IIPYARGPVRS- 190

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
            +     +  +++         +  G    S  +      +LD I     +     I + 
Sbjct: 191 -RDPKKVLDEVKRFADSGYKEIVLTGIHIASYGKDLKNIGLLDIIKMIHEIDGIKRIRLS 249

Query: 112 -ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              P+ +     +             + +QS  +++L+ +GR +   E  + I   R   
Sbjct: 250 SIEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTTKEYKSVIDRLREYI 309

Query: 169 PRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++   D++   P +T  ++    +         + +++ +  KGT  Y     
Sbjct: 310 KDVAITTDVMVGFPGETGEEFLKTYKFVEEICFSKMHVFKYSRRKGTRAYNFPNQ 364


>gi|169333944|ref|ZP_02861137.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259509|gb|EDS73475.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM
           17244]
          Length = 408

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 73/195 (37%), Gaps = 10/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          + +   ++  L+++  + +  G R +        +      +
Sbjct: 131 CNMFCTYC---IIPYARGILKNASVEKVLSQIDALSK-KGYREVVITGIHVASYKADTGE 186

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
           N+  +L+ I K   +      ++E  P  +     +     K+      + +QS  +++L
Sbjct: 187 NLIDLLELIDKENKIDRIRLGSLE--PKLLTDTFLKRLSELKSFCPHFHISLQSGCDKTL 244

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E +  +   R  F    ++ D+I   P +T   +E+           ++ 
Sbjct: 245 KEMNRKYTTKEYMEIVKRVRTYFDNPGITTDIIVGFPNETDEDFEVTKDFTDKVGFSYVH 304

Query: 204 LYQLTIEKGTLFYKM 218
           ++  + + GT   +M
Sbjct: 305 IFPYSPKHGTPASEM 319


>gi|15806170|ref|NP_294874.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Deinococcus
           radiodurans R1]
 gi|81624877|sp|Q9RV79|MIAB_DEIRA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|6458887|gb|AAF10722.1|AE001964_6 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 505

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 68/228 (29%), Gaps = 44/228 (19%)

Query: 24  HWP---------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           H P                C   C YC                    L E+       G 
Sbjct: 175 HIPPPPSGKLQAHLTIMRGCDHHCTYC---IVPTTRGPQVSRHPDDILRELDMQLA-AGV 230

Query: 69  RSIS----SIFFGG--------GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
           R ++    ++   G        G PS      + ++     +    ++       ++P +
Sbjct: 231 REVTLLGQNVNAYGVDQGAKLKGYPSF--ADLLRMVGASGIERVKFTT-------SHPMN 281

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
              +      +       + L VQS  ++ LR + R +N  + +  I   +   P +   
Sbjct: 282 FTEDVAAAIGETPAICEFVHLPVQSGSDRVLRRMAREYNREKYLTHIAQIKKHIPDVVLA 341

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            D+I   P +T   ++  L        D   ++  +   GT  YK  +
Sbjct: 342 TDIIVGFPGETEEDFQDTLSLYDEVGYDSAYMFIYSPRPGTPSYKHFQ 389


>gi|62290991|ref|YP_222784.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82700900|ref|YP_415474.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           melitensis biovar Abortus 2308]
 gi|189025203|ref|YP_001935971.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brucella
           abortus S19]
 gi|237816493|ref|ZP_04595486.1| RNA modification enzyme, MiaB family [Brucella abortus str. 2308 A]
 gi|254690285|ref|ZP_05153539.1| hypothetical protein Babob68_08952 [Brucella abortus bv. 6 str.
           870]
 gi|254694773|ref|ZP_05156601.1| hypothetical protein Babob3T_08948 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254731314|ref|ZP_05189892.1| hypothetical protein Babob42_08980 [Brucella abortus bv. 4 str.
           292]
 gi|256258538|ref|ZP_05464074.1| hypothetical protein Babob9C_14557 [Brucella abortus bv. 9 str.
           C68]
 gi|260546254|ref|ZP_05821994.1| RNA modification protein [Brucella abortus NCTC 8038]
 gi|260755825|ref|ZP_05868173.1| RNA modification protein [Brucella abortus bv. 6 str. 870]
 gi|260759048|ref|ZP_05871396.1| RNA modification protein [Brucella abortus bv. 4 str. 292]
 gi|260884850|ref|ZP_05896464.1| RNA modification protein [Brucella abortus bv. 9 str. C68]
 gi|261215100|ref|ZP_05929381.1| RNA modification protein [Brucella abortus bv. 3 str. Tulya]
 gi|297247377|ref|ZP_06931095.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella abortus bv. 5
           str. B3196]
 gi|75496027|sp|Q57AB1|MIAB_BRUAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123740938|sp|Q2YQS8|MIAB_BRUA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890451|sp|B2S9E5|MIAB_BRUA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|62197123|gb|AAX75423.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82617001|emb|CAJ12110.1| Deoxyribonuclease/rho motif-related TRAM:Protein of unknown
           function UPF0004:tRNA-i(6)A37 modification enzyme
           MiaB:Elongator [Brucella melitensis biovar Abortus 2308]
 gi|189020775|gb|ACD73497.1| hypothetical protein BAbS19_I20150 [Brucella abortus S19]
 gi|237788560|gb|EEP62775.1| RNA modification enzyme, MiaB family [Brucella abortus str. 2308 A]
 gi|260096361|gb|EEW80237.1| RNA modification protein [Brucella abortus NCTC 8038]
 gi|260669366|gb|EEX56306.1| RNA modification protein [Brucella abortus bv. 4 str. 292]
 gi|260675933|gb|EEX62754.1| RNA modification protein [Brucella abortus bv. 6 str. 870]
 gi|260874378|gb|EEX81447.1| RNA modification protein [Brucella abortus bv. 9 str. C68]
 gi|260916707|gb|EEX83568.1| RNA modification protein [Brucella abortus bv. 3 str. Tulya]
 gi|297174546|gb|EFH33893.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brucella abortus bv. 5
           str. B3196]
          Length = 467

 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRPGTP 372


>gi|307154279|ref|YP_003889663.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 7822]
 gi|306984507|gb|ADN16388.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 7822]
          Length = 478

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  ++   ++  ++   +M   + L G   +    F   T ++    
Sbjct: 207 CPAKCSFCLWPQTIGGHQYRAKSP-EAVGRDMAEAKSLFGD-KVREYMFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    +        ++        AN   ++    +  +  G+  + +G +S  +Q L  
Sbjct: 261 DKQRAIAISEHLKRLNLTWSCNARAN---LDYETLKQLKNNGLRLLLVGFESGNQQVLDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +     +  ++    I  LP +T    +  ++ A   +   + +   
Sbjct: 318 IRKGIKLEVAKKFMQNCHKLGIKVHGTFIIGLPNETQETIDETIRFACELSPHTIQVSIA 377

Query: 208 TIEKGTLFYKM 218
               GT  Y+ 
Sbjct: 378 APYPGTELYRQ 388


>gi|168187871|ref|ZP_02622506.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294276|gb|EDS76409.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 433

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 83/259 (32%), Gaps = 23/259 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-I 84
           C   C YC   F       K  +          +  +++L        I  G    S  +
Sbjct: 152 CNNFCSYCLIPFARGAVCSKNPK--------IVIDEVKKLAAHGFKEVILSGIDISSYGV 203

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           + +    +L+ + +   +     + I    P     +  +     K       L +QS  
Sbjct: 204 DLEGDWNLLNILKEIDKIDGITRVRIGSIGPEFFNEDRIRQIGNLKKLCPHFHLSLQSGC 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            ++L+ + R +   E    I+L R     +S   D+I   P +T  +++   +      +
Sbjct: 264 NETLKRMNRKYTIEEFENVINLLRKYIKDISITTDIIVGFPGETDDEFKKTYEYLKRIKL 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV-------DLYNLTQSITSAHGLHAYE 252
             + +++ +   GT   KM K  +  +  E           +           +    YE
Sbjct: 324 SKMHIFKYSPRTGTRAEKMEKQVNGNIKEERSKALIKLNEINEKKFIDKFIGENMEVLYE 383

Query: 253 ISNHSFLGAESLHNLNYWR 271
              ++  G    +  NY +
Sbjct: 384 QQCNNKEGYYEGYTPNYIK 402


>gi|114046575|ref|YP_737125.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella sp.
           MR-7]
 gi|123030839|sp|Q0HXT7|MIAB_SHESR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|113888017|gb|ABI42068.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella sp. MR-7]
          Length = 474

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GGICTFAELLRYVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P +T   +   ++     A DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGETKEDFADTMKLIEDVAFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVDMEEKKQRLAILQDRITQQAMRY 376


>gi|322434216|ref|YP_004216428.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321161943|gb|ADW67648.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 500

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 71/232 (30%), Gaps = 29/232 (12%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC D   + RR+       + + LT +           I+ +           P
Sbjct: 196 CPYACNYCTDMVVYKRRFNAYAAEHVVAELTGL------VKRYRITHVALLDSNF----P 245

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++   +               T +A+   +        Q    +GV  +  G +S  + 
Sbjct: 246 VDLKRAIAIARGIVDSGVKFAWTFQASTDFICRMSQEEVQLLADSGVRYMGFGTESTSKA 305

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ---------R 193
            L+ +  R+    E       A     R++F+LI   P +T        +         +
Sbjct: 306 VLKMMNKRHQRVDEMYETARKAELAGIRVNFNLILGYPGETEADRLETFRTMSDIGRHFK 365

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            + ++ +  + Y      G   +   ++  +V P      +   L  ++   
Sbjct: 366 NVRFSPNIFTPY-----PGIPIWPQLRELGVVEPQTLEEWETMPLGANLLPW 412


>gi|239907228|ref|YP_002953969.1| hypothetical protein DMR_25920 [Desulfovibrio magneticus RS-1]
 gi|239797094|dbj|BAH76083.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 667

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 12/196 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI---FFGGGTPSLI 84
           C  +C +C         +  +   I   + EM+++ +         +   F     PS +
Sbjct: 188 CPYRCSFCSIPK-AGPIRKWRPRDIDDVVDEMRFLYKTYNIAHFYFVDDNFILNSKPSFL 246

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +  A ++            +        S+++    +  + AG+  + LG++S  +  
Sbjct: 247 RAERFAKLV------RDKLPCIRFGFMCRSSAIDKRLLKVLKSAGLAGVFLGIESFSQAV 300

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLS 203
           L    +     E I AI +  ++   ++   I+  P  + ++    +            S
Sbjct: 301 LDRYNKKETVEEHIRAIAILNDLGITINPGFIFFDPWTSASEMRQTISVMKEIDFPSLQS 360

Query: 204 L-YQLTIEKGTLFYKM 218
           +  +LT  +GT   + 
Sbjct: 361 INSKLTCYRGTAIEQQ 376


>gi|87199004|ref|YP_496261.1| tRNA-i(6)A37 modification enzyme MiaB [Novosphingobium
           aromaticivorans DSM 12444]
 gi|123736257|sp|Q2G9P6|MIAB_NOVAD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|87134685|gb|ABD25427.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 443

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 24/232 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG---- 78
           C K C YC                    + E + +    G R I+ +      + G    
Sbjct: 162 CDKFCTYC---VVPYTRGAEISRPFSDLVEEAKLLVA-GGAREITLLGQNVNAWAGEDDK 217

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLG 136
           G P  I    +A  L        +         ++P+ +       +   +  +  + L 
Sbjct: 218 GRP--IGLDGLARALAAEPDLKRIRYTT-----SHPNDMTDGLIAAHGELEKLMPFLHLP 270

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQ+  ++ L+ + R+H A   +A +   R   P ++   D I   P +T  ++E  L+  
Sbjct: 271 VQAGNDRVLKAMNRSHTADSYMALLERIRAARPDIALSGDFIVGFPGETDAEFEDTLRLV 330

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            +        ++ +   GT    M     + +  E +      L +   + +
Sbjct: 331 DAVGYAQAFSFKYSARPGTPAATMENHVPVAVMDERLQRLQAALNRDQLAFN 382


>gi|58578929|ref|YP_197141.1| hypothetical protein ERWE_CDS_02650 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417555|emb|CAI26759.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 450

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 23/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--------MQWMRQLTGPRSISSIFFGGG 79
           C K C +C                +++   E        ++ +  +    +     + G 
Sbjct: 162 CNKFCSFC---VVPYTRGEEYSRTVEAIFKEALILADSGIKEITLIGQNVNAYHGTYKG- 217

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISLGV 137
                   ++  ++  IAK  ++      T  ++P  +  + ++     K  +  I L V
Sbjct: 218 -----NEWDLGRLIQHIAKISSIERIYYTT--SHPRDMHESLYEAHGIEKKLIPFIHLPV 270

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + LR + R H A E I  I   R     +  S D I   P +T   +E  +Q   
Sbjct: 271 QSGSNKILRKMNRKHTAEEYINIIKTLRKHRSDIAYSSDFIVGFPGETDEDFENTIQLIE 330

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    ++ +   GT 
Sbjct: 331 EVKFSQAYSFKYSPRPGTP 349


>gi|320334840|ref|YP_004171551.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Deinococcus maricopensis DSM 21211]
 gi|319756129|gb|ADV67886.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Deinococcus maricopensis DSM 21211]
          Length = 460

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 66/215 (30%), Gaps = 29/215 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQ-----------WMRQLTGPRSISSIF 75
           C   C YC     V + +  Q      S L E+             + Q           
Sbjct: 149 CDHHCTYC----IVPQTRGPQVSRHPDSILRELDTLLAAGVQEVTLLGQNVNAYGFDQGA 204

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
              G P+      + L+     +    ++       ++P +   +              I
Sbjct: 205 RMAGLPTF--ADLLRLVGRTGIRRVKFTT-------SHPMNFTEDVAMAMADTPAICEFI 255

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMEL 191
            L +QS   + LR + R +   + +  I   R   P   +S D+I   P +T   ++  L
Sbjct: 256 HLPMQSGSNRVLRRMAREYTREQYLQHIADIRKHLPNAVLSTDVIVGFPGETEEDFQQTL 315

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
                   D   ++  +   GT  +K  +D    L
Sbjct: 316 DLYDEVGYDQAFMFIYSARPGTPSHKHFEDLPKEL 350


>gi|149369934|ref|ZP_01889785.1| 2-methylthioadenine synthetase [unidentified eubacterium SCB49]
 gi|149356425|gb|EDM44981.1| 2-methylthioadenine synthetase [unidentified eubacterium SCB49]
          Length = 479

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 25/212 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGG- 79
           C   C +C            +    +S L E+  +         L G    S +++GGG 
Sbjct: 179 CDNMCTFC---VVPFTRGRERSRDPKSILDEISKLANSGYKEVTLLGQNVDSYLWYGGGL 235

Query: 80  -----TPSLIE---PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  + +E     + + +LD +A           T  +NP  +    F    K    
Sbjct: 236 KKDYKNATEMEKATATSFSQLLDLVASAQPEMRIRFST--SNPQDMTEEVFHVMAKHKNI 293

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQW 187
              + L VQS   + L+ + R H   E +A ++    I P   +S D+I   P +T    
Sbjct: 294 CKHVHLPVQSGSNRILKEMNRQHTVEEYLALVNRMWEIIPEASISQDMIIGFPSETEQDH 353

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +  L            +Y+ +   GT+  +  
Sbjct: 354 KDTLDLMEKVKFSFGYMYKYSERPGTMAARKF 385


>gi|326404964|ref|YP_004285046.1| threonylcarbamoyladenosine tRNA methylthiotransferase [Acidiphilium
           multivorum AIU301]
 gi|325051826|dbj|BAJ82164.1| threonylcarbamoyladenosine tRNA methylthiotransferase [Acidiphilium
           multivorum AIU301]
          Length = 411

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    I      ++ +R L            +    +G   
Sbjct: 138 CDHRCTFC-----IIPYGRGPSRSIP-LGAVVEQVRTLVANGYNEVVLTGVDLTSYGADL 191

Query: 81  PSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P   +   +   +L  +     +          +P+ ++ + ++        +  + L V
Sbjct: 192 PGAPKLGQLCRRLLAAVPDLPRLR-----LSSIDPAEIDDDLWRLLESEPRLMPHLHLSV 246

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           Q+  +  L+ + R H     I A   AR + P +    DLI   P +T   +   L    
Sbjct: 247 QAGSDLILKRMKRRHLRHHVIEAAVRARALRPDIALGADLIAGFPTETEAHFAETLALVD 306

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
              +D+L ++  +  KGT   ++ 
Sbjct: 307 DAGLDYLHVFPFSARKGTPAARIP 330


>gi|297529334|ref|YP_003670609.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3]
 gi|297252586|gb|ADI26032.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3]
          Length = 449

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 76/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + + +        + +    GG  + ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEIIRQARQLVAAGYKEIVLTGIHTGGYGTDLKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L D   +   +      +IEA+   +        +++   V  + + +QS     
Sbjct: 210 NFASLLRDLDEQVPGLRRLRISSIEAS--QITDEVIDVLKRSEKIVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTVEFYAERLARLREVFPELAVTSDVIVGFPGETEDEFMETYNFIREQRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA---VDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D     + V         L +   S       E+
Sbjct: 328 HVFPYSKRTGTPAARMPNQIDEETKHDRVRRLIALSDQLAKEYASRFEGQVLEV 381


>gi|167835506|ref|ZP_02462389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis MSMB43]
          Length = 461

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C K C YC                +   LTE+  +          L    +     FGG 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYRGKFGGA 213

Query: 80  TPSLIEP-QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
            P+      + A +++ +A    +      T  ++P          Y K    V+ + L 
Sbjct: 214 LPAGAHDVADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLP 271

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +   
Sbjct: 272 VQHGSDRILMAMKRGYTVLEYKSLIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALV 331

Query: 195 LSYAVDHLSLYQLTIEKGTL 214
              + D    +  +   GT 
Sbjct: 332 HEMSYDTSFSFIYSPRPGTP 351


>gi|57238993|ref|YP_180129.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ehrlichia
           ruminantium str. Welgevonden]
 gi|81637928|sp|Q5HBR5|MIAB_EHRRW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|57161072|emb|CAH57979.1| conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 445

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 23/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--------MQWMRQLTGPRSISSIFFGGG 79
           C K C +C                +++   E        ++ +  +    +     + G 
Sbjct: 157 CNKFCSFC---VVPYTRGEEYSRTVEAIFKEALILADSGIKEITLIGQNVNAYHGTYKG- 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISLGV 137
                   ++  ++  IAK  ++      T  ++P  +  + ++     K  +  I L V
Sbjct: 213 -----NEWDLGRLIQHIAKISSIERIYYTT--SHPRDMHESLYEAHGIEKKLIPFIHLPV 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + LR + R H A E I  I   R     +  S D I   P +T   +E  +Q   
Sbjct: 266 QSGSNKILRKMNRKHTAEEYINIIKTLRKHRSDIAYSSDFIVGFPGETDEDFENTIQLIE 325

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    ++ +   GT 
Sbjct: 326 EVKFSQAYSFKYSPRPGTP 344


>gi|319407864|emb|CBI81517.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 427

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G+   +   +  ++ ++QL G   I  I   G   +   P 
Sbjct: 150 CDHRCTFC-----IIPYSRGRSRSVPMGI-IIEQIKQLIGN-GIQEIVLTGVDLTSYGPD 202

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                 +  ++  I  +      + ++   +    +          K  +  + L +Q+ 
Sbjct: 203 LPGKITLGKLVSTILHHVPDLPRLRLS-SIDSIEADQELINLLAYEKRIMPHLHLSLQAG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
           +   L+ + R H    AI      R   P +    DLI   P +T   ++  L       
Sbjct: 262 DNMILKRMKRRHMRENAIQFCQDLRAKRPTIVYGADLIAGFPTETEEMFQNSLALIHECG 321

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + HL ++  +  +GT   +M +
Sbjct: 322 LTHLHVFPFSPREGTPAARMPQ 343


>gi|229086321|ref|ZP_04218499.1| hypothetical protein bcere0022_29080 [Bacillus cereus Rock3-44]
 gi|228697016|gb|EEL49823.1| hypothetical protein bcere0022_29080 [Bacillus cereus Rock3-44]
          Length = 509

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIINEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +E   +  ++D + K   +         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 LE-YGLGDLMDELRK---IDIARVRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DSAFTFIYSPREGTPAAKM 411


>gi|187927511|ref|YP_001897998.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ralstonia
           pickettii 12J]
 gi|309779787|ref|ZP_07674542.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ralstonia sp. 5_7_47FAA]
 gi|229890622|sp|B2UFP3|MIAB_RALPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187724401|gb|ACD25566.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ralstonia pickettii 12J]
 gi|308921364|gb|EFP67006.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ralstonia sp. 5_7_47FAA]
          Length = 456

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 16/221 (7%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +++     +    YV     C K C YC       R +     F            Q   
Sbjct: 136 DHLPPARVDGASAYVSIMEGCSKYCSYC--VVPYTRGEEVSRPFDDVLAEVAGLAEQGVR 193

Query: 68  -----PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
                 +++++     G  S  E  + AL+L+ +A+   +      T  ++P        
Sbjct: 194 EVTLLGQNVNAYIGKMGDTS--ERADFALLLEYVAEIPGIERIRYTT--SHPKEFSSRLI 249

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
           + Y      V+ + L VQ   ++ L  + R +   E  ++I   R I P +S   D I  
Sbjct: 250 EAYATNPKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSSIRKLRAIRPNISIATDFIVG 309

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            P +T   +   +        D    +  +   GT    +H
Sbjct: 310 FPGETDADFAKTMDLIHEIGYDTSFSFIYSPRPGTPAANLH 350


>gi|113969348|ref|YP_733141.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella sp.
           MR-4]
 gi|123130674|sp|Q0HLI3|MIAB_SHESM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|113884032|gb|ABI38084.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella sp. MR-4]
          Length = 474

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GGICTFAELLRYVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P +T   +   ++     A DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGETKEDFADTMKLIEDVAFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVDMEEKKQRLAILQDRITQQAMRY 376


>gi|23099083|ref|NP_692549.1| hypothetical protein OB1628 [Oceanobacillus iheyensis HTE831]
 gi|81746368|sp|Q8EQR4|MIAB_OCEIH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|22777311|dbj|BAC13584.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 519

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC     + R K                + Q     ++   ++   G       
Sbjct: 231 CDKFCTYC--IVPMTRGKERSRRPKDIIQEVRHLVAQGYQEVTLLGQNVNAYGKDF---- 284

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            ++I   + D +     +         ++P   +    +   + G  ++ I L VQS   
Sbjct: 285 -EDIEYGLGDLMNDIHKIDIPRVRFTTSHPRDFDDRLIEVLAQGGNLLDHIHLPVQSGSS 343

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E +  +   R   P   ++ D+I   P +T  Q+E  +        +
Sbjct: 344 EILKKMNRKYTREEYLELVRKIRIAMPNATLTTDIIVGFPNETEEQFEETMTLVEEVGFE 403

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +  +GT   + 
Sbjct: 404 AAYTFIYSPREGTPAARK 421


>gi|256545241|ref|ZP_05472606.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerococcus vaginalis
           ATCC 51170]
 gi|256399068|gb|EEU12680.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerococcus vaginalis
           ATCC 51170]
          Length = 452

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 77/226 (34%), Gaps = 19/226 (8%)

Query: 8   ENNMTGQGSNSLGVYVHWP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           ++ +     N+   YV+     C   C YC     V + +  +E+   S +  ++ +  L
Sbjct: 149 DDYVNYNSKNNFQAYVNI-MRGCDNFCSYC----IVPQSRGREESRRPSHI--IEEIENL 201

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIA----LILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                      G    S     +       +L+  AK   +      T  ++P  +  + 
Sbjct: 202 VKNGYKEITLLGQNVNSYGNKSDFNVTFPELLEKCAKIEGLQRLRFTT--SHPKDLSDDL 259

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIY 177
            +  ++     N   L +QS  ++ L+ + R +N  + +      +       +S D+I 
Sbjct: 260 IRVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEKARKLKEEIPGIAISTDIIV 319

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             P +T   ++  L        D    ++ +    T   K+    D
Sbjct: 320 GYPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKLDPIDD 365


>gi|94676510|ref|YP_588543.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|229890429|sp|Q1LU21|MIAB_BAUCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|94219660|gb|ABF13819.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 451

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 68/212 (32%), Gaps = 32/212 (15%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--------- 75
              C K C YC     V  Y  G E  +     ++         +++  I          
Sbjct: 154 IEGCDKYCSYC-----VVPYTRGIE--VSRPCEDILLEINNLADQNVREIHLLGQNVNAY 206

Query: 76  ----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
               +GGGT +       A +L  +A    +      T  ++P     +    YR     
Sbjct: 207 RGTRYGGGTCTF------AELLRLVAAINGIDRIRFTT--SHPIEFTDDLIDVYRDTPEL 258

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQW 187
           V+ + L VQS  ++ L  + R H   E  + I     + P +  S D I   P +T   +
Sbjct: 259 VSFVHLPVQSGSDRILALMKRGHTVLEYKSIIRKLYAVRPSIQISSDFIVGFPGETEEDF 318

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              +        D    +  +   GT    M 
Sbjct: 319 RQTMNLISEVNFDMSFSFIYSPRPGTPAANMV 350


>gi|24372764|ref|NP_716806.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella oneidensis MR-1]
 gi|81446317|sp|Q8CX45|MIAB_SHEON RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|24346842|gb|AAN54251.1|AE015562_1 tRNA-i(6)A37 modification enzyme MiaB [Shewanella oneidensis MR-1]
          Length = 474

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPSDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GGICTFAELLRYVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P +T   +   ++     A DH
Sbjct: 273 ILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGETQEDFADTMKLIEDVAFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D D+    + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVDMEEKKQRLAILQDRITQQAMRY 376


>gi|312793464|ref|YP_004026387.1| RNA modification enzyme, miab family [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180604|gb|ADQ40774.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 434

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 88/256 (34%), Gaps = 18/256 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   ++S   E+ + +++      I+ I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRSLKSIEEEVVRLVQKGYKEFVITGINISAYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +     +         + + L +QS  ++
Sbjct: 206 DGKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNDEFIERLLGFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++  ++    +   R  +  ++F  D+I   P +T   +   L+         
Sbjct: 266 ILKLMNRHYTTAQYQGIVDRIREKWEDVAFTTDIIVGFPGETEEDFNATLEFVQKIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI---SN 255
           + +++ + +KGT  Y M    D         +      NL          +  E+    +
Sbjct: 326 IHVFRFSPKKGTKAYDMPNQVDSKEKERRSKIMKEVAANLAYQFHKKFVGNWLEVLIEQD 385

Query: 256 HSFLGAESLHNLNYWR 271
             F G    ++ NY R
Sbjct: 386 SDFDGYYEGYSGNYIR 401


>gi|237736966|ref|ZP_04567447.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420828|gb|EEO35875.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 296

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 87/250 (34%), Gaps = 24/250 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    + + K  +   +     E+ + R       +  IF   G   +I+ 
Sbjct: 27  CSHNKCTFCN----MYKDKKFRIKTLDEIKEEIDFFRAQIKY--VRRIFLADGDALIIKT 80

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
             +  IL+    N        ++I A+P S+        +  ++ G+  + +G++S + +
Sbjct: 81  STLLEILN--YLNEKFPEKERVSIYASPKSLMLKTPEELRTLKETGIELVYIGLESGDNE 138

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT----QWEMELQRALSYAV 199
            L  + +       I  +  A+ +  + S  +I  L  +                   + 
Sbjct: 139 VLTNVNKGSTVENFIVGVKKAKEVGFQTSITVIAGLAGKNKDASKKHALKTAYAIQEVSP 198

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            +L +  L I   T+  K  + G        +    Y +   I     +    IS +S L
Sbjct: 199 KYLGILCLNILPNTILAKQAEKGKF------IEASSYEIINEI--KIMIENLNISKNSPL 250

Query: 260 GAESLHNLNY 269
              + H  NY
Sbjct: 251 TLRANHISNY 260


>gi|170751706|ref|YP_001757966.1| MiaB-like tRNA modifying enzyme [Methylobacterium radiotolerans JCM
           2831]
 gi|170658228|gb|ACB27283.1| MiaB-like tRNA modifying enzyme [Methylobacterium radiotolerans JCM
           2831]
          Length = 408

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 18/203 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG----GGTP 81
           C  +C +C   F   V R  V + + I    T +    +      +    +G    G  P
Sbjct: 136 CDHRCTFCVIPFGRGVSR-SVPEADVIAQVETIVARGGREVVLTGVDLTAYGRDLPGTAP 194

Query: 82  SL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           SL  +    +  + D      +   +VE       +  E           +  + L +Q+
Sbjct: 195 SLGGLARAILRAVPDLARLRLSSIDSVEADDALLAAIAEEERL-------MPHLHLSLQA 247

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H  ++AI      R + P      DLI   P +T  Q++  L    + 
Sbjct: 248 GDDLILKRMRRRHLRADAIRFCETVRRLRPDTVFGADLIAGFPTETEAQFDRSLDLVAAC 307

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            + HL ++  +   GT   +M  
Sbjct: 308 GLTHLHVFPYSPRPGTPAARMPP 330


>gi|85709129|ref|ZP_01040195.1| 2-methylthioadenine synthetase [Erythrobacter sp. NAP1]
 gi|85690663|gb|EAQ30666.1| 2-methylthioadenine synthetase [Erythrobacter sp. NAP1]
          Length = 455

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 20/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V  Y  G E   + +   +   R+L    +      G    +    +
Sbjct: 173 CDKFCTYC-----VVPYTRGAEIS-RPYSDLIDEARKLIEAGAREITLLGQNV-NAWSGE 225

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQ 138
           +       +  ++  +A+   +      T  ++P+ ++    + +      +  + L VQ
Sbjct: 226 DEKGRSVGLGQLIHALAELDGLERIRYTT--SHPNDMDDALIEAHGTCDKLMPYLHLPVQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R+H A   +  +   R + P ++   D I   P +T  ++E  L+    
Sbjct: 284 SGNDRVLKAMNRSHTAESYLKLLERFRTVRPDIALSGDFIVGFPGETEAEFEDTLKLVDE 343

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                   ++ +   GT    M       L  E +      L +   + +
Sbjct: 344 VRYSQAFSFKYSPRPGTPAATMDNQIAKELMDERLQRLQARLNRDQLAFN 393


>gi|149192272|ref|ZP_01870484.1| hypothetical protein VSAK1_11405 [Vibrio shilonii AK1]
 gi|148833887|gb|EDL50912.1| hypothetical protein VSAK1_11405 [Vibrio shilonii AK1]
          Length = 474

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 78/234 (33%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P   +S D I   P +T   ++  ++       
Sbjct: 271 DRVLTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT       D    LP +     LY L Q++ S    ++ ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLPEQTKKDRLYELQQTVNSQAMRYSRQM 380


>gi|302542068|ref|ZP_07294410.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459686|gb|EFL22779.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces
           himastatinicus ATCC 53653]
          Length = 496

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 133 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 190

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 191 LVAEGVTEITLLGQNVNAYGSDIGDREAFSKLLRACGNVEGLERVRF--TSPHPRDFTDD 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 249 VIAAMAETENVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAMPDAAISTDII 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 309 VGFPGETDEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 350


>gi|160947537|ref|ZP_02094704.1| hypothetical protein PEPMIC_01471 [Parvimonas micra ATCC 33270]
 gi|158446671|gb|EDP23666.1| hypothetical protein PEPMIC_01471 [Parvimonas micra ATCC 33270]
          Length = 441

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 70/237 (29%), Gaps = 15/237 (6%)

Query: 22  YVHWPFCVKKCP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGG 79
           YV+    +  C  YC F               +S + E++ + +      ++        
Sbjct: 153 YVNI---MTGCNNYCTFCIVPYARGKEISRTPESIINEIKDLAKKGYKEITLLGQNVNSY 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             +L        +L  + +   +       + ++P                    I L  
Sbjct: 210 GKTLRPKVTFPELLKMVNEIDGIERIRF--LTSHPKDCSDELIDAMASLDKVCENIHLPF 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L+ + R +     +  I   +   P +  S D+I   P +T   +E  L    
Sbjct: 268 QSGSNKILKDMHRVYTREHYLELIRKLKEKVPNITLSTDIIVGFPGETEEDFEDTLSMVE 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               D    +  +I KGT   +M       +P E        L  S+         E
Sbjct: 328 KVGYDQGFTFLYSIRKGTKAAEMQN----QIPHEVKQERFQRLIDSMYKIFYEKNKE 380


>gi|27375964|ref|NP_767493.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Bradyrhizobium japonicum USDA 110]
 gi|27349103|dbj|BAC46118.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Bradyrhizobium japonicum USDA 110]
          Length = 508

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 83/231 (35%), Gaps = 12/231 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++          +   + + +L   + +  I F    P++   +
Sbjct: 202 CPHLCNYCGQRGFWTRWRHRDP------VRFAKELARLHREQGVKVINFADENPTV--SK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +            V   +  +  A+    + +    Y+KAG  R  LG+++ +E++L  
Sbjct: 254 KVWRAFLEALIAENVDLILVGSTRADDIVRDADILHLYKKAGWQRFLLGLENTDERTLEL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +    +    AI L R          +    ++T       L++ L+Y  D + L  +
Sbjct: 314 IRKGATTAVDREAIRLLRQHGILSMATWVVGFEEETDRDHWRGLKQLLAYDPDQVQLLYV 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           T  + T ++++  +  ++ P        ++    + +   +  + +     
Sbjct: 374 TPHRWTPYFRLAAERRVIQPD----RRRWDYKHQVLATRHMAPWRVLAWFK 420


>gi|251771426|gb|EES52005.1| TRNA-i(6)A37 modification enzyme (MiaB) [Leptospirillum
           ferrodiazotrophum]
          Length = 452

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 89/231 (38%), Gaps = 23/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPS 82
           C K C YC      R     +   I S ++E++ +    G R ++ +      +G G P 
Sbjct: 168 CDKSCSYC---VVPRTRGPERSRPIASIVSEVRGLVSQ-GYREVTLLGQNVNGYGKGAP- 222

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E +  A +L  + +   +      T  ++PS +++       ++   +  + L VQS 
Sbjct: 223 --EGEGFADLLLALDRVEGLLRIRFTT--SHPSDLDLPTIGAMARSSKVMPHLHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ LR + R +   E    I   R   P ++   DLI    +++   ++  L+    + 
Sbjct: 279 SDRMLRLMERGYTLEEYREKIRHLRAAIPDVALTTDLIVGFCEESEEDFQRTLEAVREFR 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            D    +  +   GT  Y         LP  +V++D +     + +   L 
Sbjct: 339 FDGAFCFIYSPRPGTPAYGREG-----LPDRSVSLDRFRRLDDLLTGMVLE 384


>gi|182678041|ref|YP_001832187.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|229890430|sp|B2IIK5|MIAB_BEII9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|182633924|gb|ACB94698.1| RNA modification enzyme, MiaB family [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 510

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 20/226 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C +C                +++ L E++ +   +G R ++ I            +
Sbjct: 195 CDKFCSFC---VVPYTRGAETSRPVEAILAEVETLIA-SGVREVTLIGQNVNAYHGFDAM 250

Query: 85  E--PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P ++A ++  +A    +      T  ++P+ +  +    +R     +  + L VQS 
Sbjct: 251 TGAPASLASLMARVAAMPGLLRIRYTT--SHPNDMGEDLIAAHRDIPALMPFLHLPVQSG 308

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A + +  I   R   P +  S D I   P +T   +E  L       
Sbjct: 309 SDKILAAMNRRHKAGDYLELIASIRAARPDIALSSDFIVGFPGETEADFEATLALIEQVG 368

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                 ++ +   GT         D     E+V        Q++  
Sbjct: 369 FASAFSFKYSQRPGTPGADRPDQID-----EDVKAQRLARLQALLE 409


>gi|316931775|ref|YP_004106757.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris DX-1]
 gi|315599489|gb|ADU42024.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris DX-1]
          Length = 423

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 74/202 (36%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + + +++ + +      + +      +G   P  
Sbjct: 154 CDHRCTFC---IIPYGRGNSRSVPVGAVVEQVRRLAERGHAEIVLTGVDLTSYGADLPGT 210

Query: 84  IEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +   +   +L  + +   +  +    +EA     + +           +  + L +Q+ 
Sbjct: 211 PKLGTLVKKVLRHVPELQRLRISSIDQVEA-----DRDLIDALATEPRLMPHLHLSLQAG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H  ++AIA    AR + P +    DLI   P +T   ++  L       
Sbjct: 266 DDLILKRMKRRHARADAIAFCAEARRLRPDIALGADLIAGFPTETDEMFQRSLDLVEECG 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           +  L ++  +   GT   +M +
Sbjct: 326 LTFLHVFPYSPRPGTPAARMPQ 347


>gi|153008094|ref|YP_001369309.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ochrobactrum
           anthropi ATCC 49188]
 gi|229890580|sp|A6WWX6|MIAB_OCHA4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|151559982|gb|ABS13480.1| RNA modification enzyme, MiaB family [Ochrobactrum anthropi ATCC
           49188]
          Length = 462

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 81/246 (32%), Gaps = 29/246 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +     
Sbjct: 179 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGA 231

Query: 86  -----PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 232 GDDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 289

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   R + P ++   D I   P +T   +E  ++    
Sbjct: 290 SGSDRILKAMNRRHKADEYVRLIERIREVRPDLALSGDFIVGFPGETDQDFEDTMRLVRD 349

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                   ++ +   GT            L             Q + +      Y   + 
Sbjct: 350 VNYAQAYSFKYSPRPGTPGA--------DLDDHVEEAVKDERLQRLQALLSEQQYAFQD- 400

Query: 257 SFLGAE 262
           S +G E
Sbjct: 401 SMIGRE 406


>gi|213423170|ref|ZP_03356184.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 58

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQT 183
           +AGVNRIS+GVQS  E  L+ LGR H   EA+ A  LA  +  R  + DL++ LP QT
Sbjct: 1   RAGVNRISIGVQSFSEPKLKRLGRIHGPQEAMRAARLANGLGLRSFNLDLMHGLPDQT 58


>gi|15615846|ref|NP_244150.1| hypothetical protein BH3284 [Bacillus halodurans C-125]
 gi|10175907|dbj|BAB07003.1| BH3284 [Bacillus halodurans C-125]
          Length = 325

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C            +++ +  F T ++              +F   T +    + +  
Sbjct: 59  CTFCSERGSGDFAGDRKDDLVTQFHT-IKERMHKKWTSGKYIGYFQAYTNTYAPVETLRE 117

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + I +   V   V + I   P  +  +  +   +        + LG+Q++ E++   +
Sbjct: 118 YYEVILEQEGV---VGLAIATRPDCLPDDVVEYLAELNKRTYLWVELGLQTVHERTALLI 174

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L 
Sbjct: 175 NRAHDYQCYVDGVNKLRKHGIRVCSHIINGLPLENHQMMMETAKEVAKLDVQGIKIHSLH 234

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + K T   K ++ G +   S    V+L      +   H +  
Sbjct: 235 LLKRTPMVKQYEKGLVEFMSLEEYVNLVVDQLEVLPPHMIIH 276


>gi|319404904|emb|CBI78505.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 427

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G+   +   +  ++ ++QL G   I  I   G   +   P 
Sbjct: 150 CDHRCTFC-----IIPYSRGRSRSVPMGI-IIEQIKQLVGN-GIQEIVLTGVDLTSYGPD 202

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                 +  ++  I  +      + ++   +    +          K  +  + L +Q+ 
Sbjct: 203 LPGKITLGKLVSTILHHVPDLPRLRLS-SIDSIEADQELINLLAYEKRIMPHLHLSLQAG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
           +   L+ + R H    AI      R   P +    DLI   P +T   ++  L       
Sbjct: 262 DNMILKRMKRRHLRENAIQFCQDLRAKRPTIVYGADLIAGFPTETEEMFQNSLALIHECG 321

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + HL ++  +  +GT   +M +
Sbjct: 322 LTHLHVFPFSPREGTPAARMPQ 343


>gi|308275233|emb|CBX31830.1| hypothetical protein N47_N26550 [uncultured Desulfobacterium sp.]
          Length = 475

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 78/233 (33%), Gaps = 20/233 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YCD +   R ++     ++       + +R L     +  I F     +     
Sbjct: 209 CPYACSYCDRSVFGRSFRFNSAEYMY------EHVRYLNERFGVRHIIFYDDQFTF---- 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++D           V          ++ +     ++AG   IS+G+++ +E  L  
Sbjct: 259 KRERVVDFAKMMINRPLGVSFNCVVRAEHIDYDLLLMLKEAGCWMISIGIETGDENLLSR 318

Query: 148 LGRNHNASEAI--AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             R  NA  A     I L +    R     +  LP +T       ++   S  +D L++ 
Sbjct: 319 -HR-QNADLAFLSEKIKLIKKAGIRTKGLFMIGLPGETEAAINKSMEYVFSNPIDELNVA 376

Query: 206 QLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYN-----LTQSITSAHGLHAYE 252
           + T   G+  Y  +H+ G+     E +    +      +T+          Y 
Sbjct: 377 KFTPFPGSPIYENIHEMGEFNEDWELMDCMNFLFIPKGMTKDRLEELFNKFYR 429


>gi|120555649|ref|YP_960000.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter aquaeolei
           VT8]
 gi|229890561|sp|A1U494|MIAB_MARAV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120325498|gb|ABM19813.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter aquaeolei
           VT8]
          Length = 448

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 15/244 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+   G++    +V     C K   YC F              +   + E+  +    G
Sbjct: 139 DNLPEPGADGPSAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPVDDVIAEVAHLAAQ-G 194

Query: 68  PRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            R +     ++    G     +  ++A +++ IA    +      T  ++P        +
Sbjct: 195 VREVNLLGQNVNAYRGETHDGDQMDLAELIEVIATIDGIDRIRYTT--SHPVEFSDALIE 252

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
            Y +    V+ + L VQS  ++ L  + R H A E  + +   R I P +SF  D I   
Sbjct: 253 VYERVPELVSHLHLPVQSGSDRILAAMKRGHTALEYKSKLRRLRKIRPDISFSSDFIIGF 312

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T   +E  ++       D    +  +   GT    +  D  + +  + +++    L 
Sbjct: 313 PGETDKDFEDTMKLINDIGFDMSFSFIYSARPGTPASDLPDDTPMEVKKQRLSILQDRLN 372

Query: 240 QSIT 243
           Q++ 
Sbjct: 373 QNVM 376


>gi|119358129|ref|YP_912773.1| RNA modification protein [Chlorobium phaeobacteroides DSM 266]
 gi|229890478|sp|A1BIX2|MIAB_CHLPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|119355478|gb|ABL66349.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium
           phaeobacteroides DSM 266]
          Length = 442

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF---GGGTPSLI 84
           C   C +C            + +  +S L E++ +    G R I+ +         P+  
Sbjct: 157 CNNMCAFC---VVPFTRGRERSHPFESVLDEVRALAD-DGCREITLLGQNVNSYHDPA-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ--GYRKAGVNRISLGVQSLEE 142
              + + +LD +++    +     T  ++P  +  +  +    R    N + L VQS   
Sbjct: 211 SGADFSRLLDAVSREAPETRIRFTT--SHPKDMSHSLVETMALRPNICNHLHLPVQSGST 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H+  E    I L R   P +S   DLI     ++    +  L+       D
Sbjct: 269 RMLARMNRGHDIEEYRNKIELLRKWIPGISLSTDLIAGFCGESEADHDQTLELMREVRFD 328

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
            + ++  ++ +GTL  +   
Sbjct: 329 SVFMFYYSVRQGTLAARTMP 348


>gi|304314124|ref|YP_003849271.1| Fe-S oxidoreductase [Methanothermobacter marburgensis str. Marburg]
 gi|302587583|gb|ADL57958.1| predicted Fe-S oxidoreductase [Methanothermobacter marburgensis
           str. Marburg]
          Length = 464

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 44/112 (39%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           +V     +    V+ +  +  R AG+  I  GV+S  ++ L  + +     +A  A+  A
Sbjct: 270 DVSFVTSSRVDMVQESLLRDLRAAGMKTIYYGVESGCQRVLDMMKKGITVKQAEDAVRAA 329

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           R     +    I   P +  ++ +  +  ++    D+     LT   GT  Y
Sbjct: 330 RKAGVEVITSFILGYPGEKPSEMDRTIDFSIKLDPDYSQYSILTPFPGTPLY 381


>gi|302871702|ref|YP_003840338.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574561|gb|ADL42352.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 471

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 81/258 (31%), Gaps = 20/258 (7%)

Query: 19  LGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +  +V+  + C   C YC     +  Y  G+E   +     +  + QL           G
Sbjct: 181 VSAFVNIIYGCNNFCTYC-----IVPYVRGRERS-RRPEEIIYEIEQLVQNGVKEVTLLG 234

Query: 78  GGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
               S    L        +L+ + +   +     +T  ++P  +        R       
Sbjct: 235 QNVNSYGKDLANGITFPKLLEKVNEIKGIERIRFVT--SHPKDLSDELIVAMRDLDKVCE 292

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R++   + +  +   +   P ++   D+I   P +T   +E 
Sbjct: 293 HIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFED 352

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAH 246
            L        D    +  +  +GT   KM       +  +        +  +        
Sbjct: 353 TLDVCQKVEFDSAYTFIYSKRRGTPAEKMPNQVPEDIKHQRFQRLVKLVEEIALKKNKQM 412

Query: 247 GLHAYEISNHSFLGAESL 264
               YEI   S     +L
Sbjct: 413 LGKTYEILIDSRSKRNNL 430


>gi|118444532|ref|YP_878676.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium novyi NT]
 gi|118134988|gb|ABK62032.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium novyi NT]
          Length = 289

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 91/240 (37%), Gaps = 12/240 (5%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CD    + + +  +   ++    +++  R+      +  IF   G   +++ 
Sbjct: 25  CSHNKCTFCD----MYKDRSFKIKSLEEVFEDLELSRKYYKY--VRRIFLADGDALILKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +N+  IL  I + +     V +    A+       +    +  G++ I +GV+S  ++ L
Sbjct: 79  ENLEKILIKIKELFPECERVAVYGTPADILRKSEEDLIKLKNLGLDIIYIGVESGSDEVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLS 203
           + + +   + E I A    +    ++S  LI  L  +  +Q       +   +   D+L 
Sbjct: 139 KDVKKGVTSEEIIKAGQKVKRTGIKLSATLISGLGGKEKSQLHAVESARVISAINPDYLG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT--SAHGLHAYEISNHSFLGA 261
           +  L    GT  ++   + ++ L +    +                  +   SN++ L A
Sbjct: 199 ILTLMNAPGTEMHEKIANNEITLLNPKEVMVETRELIRNLEVENCVFRSNHASNYAPLAA 258


>gi|164688057|ref|ZP_02212085.1| hypothetical protein CLOBAR_01702 [Clostridium bartlettii DSM
           16795]
 gi|164602470|gb|EDQ95935.1| hypothetical protein CLOBAR_01702 [Clostridium bartlettii DSM
           16795]
          Length = 482

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 77/234 (32%), Gaps = 14/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     M  +++L    +      G    S    +
Sbjct: 194 CNNFCTYC-----IVPYTRGRERS-RRPEDIMNEIKELVANGTKEVTLLGQNVDSYGKTL 247

Query: 85  EPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E ++     + +     +     I  + ++P  +        R        + L VQ   
Sbjct: 248 EEEDRMTFAELLRAVNEIDGLERIRFMTSHPKDISDEVIYAMRDCDKVCEFLHLPVQCGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +  +  A+   P +  S D++   P +T    E  L        
Sbjct: 308 TKLLKKMNRHYSKEDYLRIVEKAKAEVPNIAFSTDIMVGFPGETEEDVEDTLDVIRQVRY 367

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D+   +  +   GT   KM       +  +     L  + +     +  H  E+
Sbjct: 368 DNAFTFIYSKRTGTPAAKMEDQIPEDVKHKRFNRVLELVNEISKENNTTHQDEV 421


>gi|51246596|ref|YP_066480.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Desulfotalea psychrophila LSv54]
 gi|50877633|emb|CAG37473.1| related to Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Desulfotalea psychrophila LSv54]
          Length = 572

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 65/228 (28%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   + V  Y        +     +        P+++  I             
Sbjct: 187 CPFACSYCLSAAEVGVYHKPLSQVQEELDLILAH-----APKTLRFIDRTYN-------D 234

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS--LGVQSLEEQSL 145
           N    L                 E  P       F   +     R    +G+QS  + +L
Sbjct: 235 NWRRGLAIWKMLMEYDCQTLFHFEIAPDFFTEEIFDFLKTVPAGRFQFEIGIQSTNDPTL 294

Query: 146 RFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R     +    +  LA      +  DLI  LP +T   +    +   +    ++ +
Sbjct: 295 DAICRRMKTEKVRQIVSRLASYSNIHLHVDLILGLPYETRETFLRSFEDVFAMGAHYIQM 354

Query: 205 YQLTIEKGTLFYKMHKDGDL---VLPSENVAVDLYNLTQSITSAHGLH 249
             L +   T  ++  ++       +P  +V  + +    ++   +   
Sbjct: 355 GLLKMLPDTPLFQQREEFGYVASKIPPYSVYQNSWLDADAMADLYWFC 402


>gi|332300307|ref|YP_004442228.1| Ribosomal protein S12 methylthiotransferase rimO [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177370|gb|AEE13060.1| Ribosomal protein S12 methylthiotransferase rimO [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 443

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 14/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC       R+     E  ++     +    +     +  S ++G     L + 
Sbjct: 152 CDRTCSYCAIPLITGRHHSRPMEEIVREIEKRVATGCREFQIIAQDSTYYGVD---LYQE 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q IA +LD +A+   V         A P+   +       K       + L +Q      
Sbjct: 209 QAIATLLDRLAQVEGVHWLRLHY--AYPNHFPIELLDVMAKHDNICKYLDLALQHSSNHM 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R     E IA +   R   P ++    ++   P +T   +   L        + L
Sbjct: 267 LQLMRRQITREETIALLERIRKQVPGIALRTTMMVGHPGETDEDFADLLDFVSQMRFERL 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             +Q + E+GT  YK ++D         V  + Y+   SI    
Sbjct: 327 GAFQYSHEEGTYAYKHYQDD----VPPEVKQERYDALMSIQETI 366


>gi|297617277|ref|YP_003702436.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145114|gb|ADI01871.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 586

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC     +     G   F ++    +++ + Q+  P+ I  +           P
Sbjct: 185 CPFNCSYC-----ISSTTRGVRWFTLERVKEDLRKLLQI-KPKEIKFVDRTFNA----NP 234

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
           + +  I+D + +    +       E     ++    +  +    GV R  +GVQS   + 
Sbjct: 235 KRMREIMDFLIQE---AKETSCHFEIAADRLDQGTIEFLKSVPLGVFRFEIGVQSTNPEV 291

Query: 145 LRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + R  N     + +  + +     +  DLI  LP +T         +      DHL 
Sbjct: 292 LQAVNRPMNWELLESNVKSIRQQHNIFIHLDLIAGLPGETYHSVANSFNQVYRLCPDHLQ 351

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           L  L + KG+       +       E     L N   +      L   E
Sbjct: 352 LGFLKMLKGSAIRDKSYEHGYKFSFEPPYEVLQNAYITYGEMVRLKRIE 400


>gi|296331976|ref|ZP_06874440.1| putative Fe-S oxidoreductase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305675630|ref|YP_003867302.1| putative Fe-S oxidoreductase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296150747|gb|EFG91632.1| putative Fe-S oxidoreductase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413874|gb|ADM38993.1| putative Fe-S oxidoreductase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 323

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLITQFHDIKNRMHEKWKDGKYIAYFQAFTNTHAPVEV 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + +     +   V I+I   P  +  +      +        + LG+Q++ E++ 
Sbjct: 110 LREKFESVLA---LDDVVGISIATRPDCLPDDVVDYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+ +  +  ++  R    R+   +I  LP +         +      V  + ++
Sbjct: 167 LLINRAHDFNCYVEGVNKLRKHGIRVCSHIINGLPLEDRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L + KGT   K ++ G L   S++ 
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLSQDE 252


>gi|317152418|ref|YP_004120466.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942669|gb|ADU61720.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 484

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 16/195 (8%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  KC +C    F       K  +     + L E+  ++ L        +FF   T +  
Sbjct: 217 CPGKCIFCTAPEFY-----GKRIRCRSTDNVLKELHEIKSLGY----REVFFRDETFTAY 267

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + +NI    +  A+    S ++          V+       +KAG + I  GV++  ++ 
Sbjct: 268 KKRNI----EICARMVKDSLDLSWIANGRVDLVDSEALAAMKKAGCHMIKFGVETGSDEI 323

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR   +   A +A  A   A+ +       L+   P ++       ++          S 
Sbjct: 324 LRRYKKGTTAEQARQAFRYAKEVGLDTHAHLVVGGPGESEATLAHTIEFVKELDPTTASF 383

Query: 205 YQLTIEKGTLFYKMH 219
             LT   GT  ++  
Sbjct: 384 GILTPYAGTELFEEV 398


>gi|153809778|ref|ZP_01962446.1| hypothetical protein RUMOBE_00159 [Ruminococcus obeum ATCC 29174]
 gi|149833956|gb|EDM89036.1| hypothetical protein RUMOBE_00159 [Ruminococcus obeum ATCC 29174]
          Length = 315

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 74/228 (32%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF       ++     I S +  +   R +         +F   T +   
Sbjct: 55  CIFCSAGGSGDF---AADAELSVTEQIDSQIALLSAKRPIHK----YIAYFQAYTNTYAP 107

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +  I      + +V   V ++I   P  +  +      +    +   + LG+Q++ E
Sbjct: 108 VEYLRKIFTEALAHPSV---VALSIGTRPDCLGEDVLDLLNELNQRKPVWVELGLQTMHE 164

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++  ++ R +  S    A+   R     +    I  LP ++       +Q      +  +
Sbjct: 165 RTAAYIRRGYPLSCFEDAVQNLRKRQIEVIVHTILGLPGESEKDILETMQYLNGQDIQGI 224

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L  L + KGT   + +  G   +      ++L            +  
Sbjct: 225 KLQLLHVLKGTDLAEDYLAGKFRVYEREEYLNLLIDCLEYLDPSIVIH 272


>gi|222054999|ref|YP_002537361.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221564288|gb|ACM20260.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 451

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 79/221 (35%), Gaps = 18/221 (8%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
           +S L E+  +    G R+++ +       S + P+ +  I DGI      S +++    +
Sbjct: 216 ESVLAELDEVYNRYGFRAVAFVD---DNFS-LSPERVIAIADGIRAR---SYDLQWWNFS 268

Query: 113 NPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
              ++       Q   +AG   + LG++S +++SL+ LG+ +       A+ L +     
Sbjct: 269 RVDNIVGNPQMVQAMAQAGSKTVFLGIESADDESLKTLGKENQGEATAKAVKLLQENGIE 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK---------MHKD 221
           +    I     +T    E  +Q A+    +      LT   GT  Y+           K 
Sbjct: 329 VFGSYILGHLNETAKDVERTIQMAVDLNTNIAQFSILTPYPGTPLYRELKERIFLKRWKF 388

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            D +           +L Q +     L  Y  S  +     
Sbjct: 389 YDALHLVFRHPRINRHLLQFLLIKAYLRFYRRSKKAKDDFR 429


>gi|228992460|ref|ZP_04152388.1| hypothetical protein bpmyx0001_32010 [Bacillus pseudomycoides DSM
           12442]
 gi|229000596|ref|ZP_04160136.1| hypothetical protein bmyco0003_51290 [Bacillus mycoides Rock3-17]
 gi|229006018|ref|ZP_04163707.1| hypothetical protein bmyco0002_29390 [Bacillus mycoides Rock1-4]
 gi|228755217|gb|EEM04573.1| hypothetical protein bmyco0002_29390 [Bacillus mycoides Rock1-4]
 gi|228759151|gb|EEM08157.1| hypothetical protein bmyco0003_51290 [Bacillus mycoides Rock3-17]
 gi|228767281|gb|EEM15916.1| hypothetical protein bpmyx0001_32010 [Bacillus pseudomycoides DSM
           12442]
          Length = 509

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIINEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +E   +  ++D + K   +         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 LE-YGLGDLMDELRK---IDIARVRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DSAFTFIYSPREGTPAAKM 411


>gi|193214302|ref|YP_001995501.1| RNA modification enzyme, MiaB family [Chloroherpeton thalassium
           ATCC 35110]
 gi|229890479|sp|B3QVA0|MIAB_CHLT3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|193087779|gb|ACF13054.1| RNA modification enzyme, MiaB family [Chloroherpeton thalassium
           ATCC 35110]
          Length = 451

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 11/250 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +  Y  G+E   +   + +  ++QL+   +      G    S  +  
Sbjct: 170 CDNMCAFC-----IVPYTRGRERS-RPMTSILDELKQLSDEGTREVTLLGQNVNSYYDEN 223

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
           +     + + K   V+ N+ I     +P  +          RK     I L VQS   + 
Sbjct: 224 SGTRFANLMDKASLVNPNMRIRFTTSHPKDISSELIDVIAERKNLCEFIHLPVQSGSSRM 283

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   + +  I L ++  P   +S D+I     +T       L        D+ 
Sbjct: 284 LELMNRGHTREDYLEKIALIKSKIPNCSISTDMISGFCTETEADHAATLSLLREVRYDYA 343

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
             +  ++   T       D       +    ++  L Q I++    +    ++   +  E
Sbjct: 344 FTFVYSVRPNTPAATRLNDDVPDDVKQRRLSEVIALQQKISAELYRNDIGNTHEVLIEGE 403

Query: 263 SLHNLNYWRY 272
           S  + + W  
Sbjct: 404 SKRSSDMWMG 413


>gi|69244086|ref|ZP_00602622.1| Conserved hypothetical protein 1212 [Enterococcus faecium DO]
 gi|257880446|ref|ZP_05660099.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257883259|ref|ZP_05662912.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257888993|ref|ZP_05668646.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257891524|ref|ZP_05671177.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257894535|ref|ZP_05674188.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257900324|ref|ZP_05679977.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|258614092|ref|ZP_05711862.1| hypothetical protein EfaeD_00117 [Enterococcus faecium DO]
 gi|260562445|ref|ZP_05832955.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261206891|ref|ZP_05921581.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289567066|ref|ZP_06447463.1| radical SAM protein [Enterococcus faecium D344SRF]
 gi|293553709|ref|ZP_06674332.1| radical SAM protein, family [Enterococcus faecium E1039]
 gi|293563985|ref|ZP_06678392.1| radical SAM protein, family [Enterococcus faecium E1162]
 gi|293571992|ref|ZP_06683005.1| radical SAM protein, family [Enterococcus faecium E980]
 gi|294613890|ref|ZP_06693828.1| putative Fe-S oxidoreductase [Enterococcus faecium E1636]
 gi|294619128|ref|ZP_06698620.1| radical SAM protein, family [Enterococcus faecium E1679]
 gi|294622188|ref|ZP_06701253.1| putative Fe-S oxidoreductase [Enterococcus faecium U0317]
 gi|314940364|ref|ZP_07847526.1| radical SAM protein family [Enterococcus faecium TX0133a04]
 gi|314943339|ref|ZP_07850114.1| radical SAM protein family [Enterococcus faecium TX0133C]
 gi|314949261|ref|ZP_07852607.1| radical SAM protein family [Enterococcus faecium TX0082]
 gi|314953919|ref|ZP_07856777.1| radical SAM protein family [Enterococcus faecium TX0133A]
 gi|314993191|ref|ZP_07858572.1| radical SAM protein family [Enterococcus faecium TX0133B]
 gi|314997353|ref|ZP_07862310.1| radical SAM protein family [Enterococcus faecium TX0133a01]
 gi|68196543|gb|EAN10969.1| Conserved hypothetical protein 1212 [Enterococcus faecium DO]
 gi|257814674|gb|EEV43432.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257818917|gb|EEV46245.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257825056|gb|EEV51979.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257827884|gb|EEV54510.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257830914|gb|EEV57521.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|257838236|gb|EEV63310.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|260073130|gb|EEW61475.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260078869|gb|EEW66570.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161145|gb|EFD09048.1| radical SAM protein [Enterococcus faecium D344SRF]
 gi|291593255|gb|EFF24826.1| putative Fe-S oxidoreductase [Enterococcus faecium E1636]
 gi|291594614|gb|EFF25999.1| radical SAM protein, family [Enterococcus faecium E1679]
 gi|291598285|gb|EFF29377.1| putative Fe-S oxidoreductase [Enterococcus faecium U0317]
 gi|291602135|gb|EFF32364.1| radical SAM protein, family [Enterococcus faecium E1039]
 gi|291604075|gb|EFF33602.1| radical SAM protein, family [Enterococcus faecium E1162]
 gi|291607916|gb|EFF37225.1| radical SAM protein, family [Enterococcus faecium E980]
 gi|313588567|gb|EFR67412.1| radical SAM protein family [Enterococcus faecium TX0133a01]
 gi|313592305|gb|EFR71150.1| radical SAM protein family [Enterococcus faecium TX0133B]
 gi|313594118|gb|EFR72963.1| radical SAM protein family [Enterococcus faecium TX0133A]
 gi|313597951|gb|EFR76796.1| radical SAM protein family [Enterococcus faecium TX0133C]
 gi|313640404|gb|EFS04984.1| radical SAM protein family [Enterococcus faecium TX0133a04]
 gi|313644360|gb|EFS08940.1| radical SAM protein family [Enterococcus faecium TX0082]
          Length = 318

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           ++     F  E+  M Q         ++F   T +    + I  
Sbjct: 50  CTFCSVSGSGDMIVAPEDPLPIQFQKEIDMMHQKWPHVQQYIVYFQNFTNTHAPVEIIKE 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +     +   V +++   P  +         +        + LG+Q+  E++ + +
Sbjct: 110 RFEQV---VNLPGVVGLSVGTRPDCLPDEVVDYLAELNERMYLWVELGLQTTFEETSKLI 166

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +++   +  ++R  L   +  + L+ +
Sbjct: 167 NRAHDYQTYLDGVAKLRKHNIRVCTHLINGLPGESLEMMKENVRRTILDSDIQGIKLHLM 226

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            + + T   + + +G L L 
Sbjct: 227 HLMRKTRMLRDYHEGRLQLM 246


>gi|325660960|ref|ZP_08149587.1| hypothetical protein HMPREF0490_00319 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472467|gb|EGC75678.1| hypothetical protein HMPREF0490_00319 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 288

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 14/219 (6%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +CDF          ++         ++ + +L        +FF G    +IE + + 
Sbjct: 38  KCRFCDFAKDTFSLHSDEK-----IEKNLKILSKLQPENP--RVFFLGENAFVIESERLL 90

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +   +          E  + +    V        +  +KAG++ + LG++S  +  L  
Sbjct: 91  RLFSLVRTYMP--QVKEFAMYSRIDDVLRKTPEELELLKKAGLSDLHLGLESGSDPILDV 148

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW--EMELQRALSYAVDHLSLY 205
           + +   +++     H+           +I  L  +T ++       +   +     +   
Sbjct: 149 MNKGVTSADMRKGFHMLDRAGIGYYVTVILGLGGRTFSRLHAIETAKFLNTIHPKDIWCL 208

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +L +  GT  Y+  K G     +    +    L     +
Sbjct: 209 KLHLFPGTPLYRESKRGHFDPMTPEEILREEYLLLENLT 247


>gi|294142164|ref|YP_003558142.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella violacea DSS12]
 gi|293328633|dbj|BAJ03364.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella violacea DSS12]
          Length = 474

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 16/225 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   + E+  + +  G R ++ +      F G T     
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPVDDVILEVAQLAEQ-GVREVNLLGQNVNAFRGAT----H 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     +     +P     +    Y      V+ + L VQS  +
Sbjct: 212 DDDICTFAELLRYIADIDGIDRVRFTTSHPIEFSQDIIDVYEDTPELVSFLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R H A E  + I   R   P +  S D I   P ++   +   ++     A D
Sbjct: 272 HILTQMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGESKQDFADTMKLIEDVAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           H   +  +   GT    +  D  L    E +A+    +TQ     
Sbjct: 332 HSFSFIYSARPGTPAADLPDDVTLAEKKERLAILQERITQQAMRY 376


>gi|260760773|ref|ZP_05873116.1| RNA modification protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260671205|gb|EEX58026.1| RNA modification protein [Brucella abortus bv. 2 str. 86/8/59]
          Length = 380

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 97  CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 149

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 150 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 207

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 208 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 267

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 268 VNYAQAYSFKYSPRPGTP 285


>gi|239828100|ref|YP_002950724.1| hypothetical protein GWCH70_2769 [Geobacillus sp. WCH70]
 gi|239808393|gb|ACS25458.1| conserved hypothetical protein [Geobacillus sp. WCH70]
          Length = 320

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 3/131 (2%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +       +   V ++I   P  +  +  +   +        + LG+Q++ E++   +
Sbjct: 110 LREKYETVLNLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTAMLI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  +   R    R+   +I  LP +         +   S  +  + ++ L 
Sbjct: 170 NRAHDFECFVKGVEKLRKHGIRVCAHIINGLPLEDYDMMMETAKTVASMDIQGIKIHLLH 229

Query: 209 IEKGTLFYKMH 219
           + KGT   K +
Sbjct: 230 LLKGTPMVKQY 240


>gi|295706938|ref|YP_003600013.1| Fe-S oxidoreductase [Bacillus megaterium DSM 319]
 gi|294804597|gb|ADF41663.1| Fe-S oxidoreductase [Bacillus megaterium DSM 319]
          Length = 320

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 13/194 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   +               +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLVTQFNEISEKMHHKWKDGKYVAYFQAFTNTHAPVEE 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + + K   V   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 110 LREKYEAVLKLPGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTS 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+    +  +   R    R+   +I  LP +T       ++      V  + ++
Sbjct: 167 LLINRAHDHQCYVDGVAKLRKHGIRVCSHIINGLPLETPDMMMETVREVAKLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMH 219
            L + KGT   K +
Sbjct: 227 LLHLLKGTPMVKQY 240


>gi|71909139|ref|YP_286726.1| hypothetical protein Daro_3527 [Dechloromonas aromatica RCB]
 gi|123774245|sp|Q47A75|MIAB_DECAR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71848760|gb|AAZ48256.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dechloromonas aromatica
           RCB]
          Length = 445

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 12/214 (5%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + M          +V     C K C +C       R       F               G
Sbjct: 137 DAMPPSEIKGASAFVSIMEGCSKFCTFC--IVPYTRGGEVSRPFNDVLTEVADLAAHGVG 194

Query: 68  PRSI---SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
             ++   +   + G      E  ++AL+++ IA+   +      T  ++P  +  + F  
Sbjct: 195 EVTLLGQNVNAYRGDMEGTEEKADLALLIEYIAEVPGIERIRYTT--SHPREMTQSLFDT 252

Query: 125 YRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALP 180
           Y K    V+ + L VQ+  ++ L  + R +   E  + I   R   P +S   D I   P
Sbjct: 253 YVKVPKLVSHLHLPVQAGSDRVLAAMKRGYTTLEYKSIIRKLRAARPDISLSSDFIVGFP 312

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +T   +E  ++       D    +  +   GT 
Sbjct: 313 GETDEDFEKTMKLIDDVGFDSSFSFIYSPRPGTP 346


>gi|295706204|ref|YP_003599279.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium DSM
           319]
 gi|294803863|gb|ADF40929.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium DSM
           319]
          Length = 509

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +Q +R L           G    +  +  
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDF 274

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D + +   +         ++P   +    +   K G  V+ I L VQS    
Sbjct: 275 EDITYGLGDLMDEIRKIDVARIRFTTSHPRDFDDRLIEVLAKGGNLVDHIHLPVQSGSSD 334

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  +        D 
Sbjct: 335 ILKIMARKYSREHYLELVRKIKEAIPTASLTTDIIVGFPNETDEQFEETMSLYREVEFDS 394

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +  +  +GT   KM  +  +    +   +   N   +  SA  L  YE
Sbjct: 395 AYTFIYSPREGTPAAKMQDNVPME--VKKERLQRLNALVNEISAKKLKEYE 443


>gi|291563884|emb|CBL42700.1| radical SAM protein, TIGR01212 family [butyrate-producing bacterium
           SS3/4]
          Length = 310

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 64/208 (30%), Gaps = 23/208 (11%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSI 74
           C  +        C +C             E    S   +         R+++G  +    
Sbjct: 37  CPNRDGTLGRGGCIFCS----AGGSGDFAEKQAGSLREQADLAKARVSRKISGDDAAYIA 92

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +      +  +         +     ++I   P  +     +   +    +  
Sbjct: 93  YFQSYTNTYAPLSYLEQLFSEAISLPEI---CALSIGTRPDCLPDETVELLSRLNKEKPV 149

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + LG+Q++ E + + + R +       A    +     +   +I  LP ++  Q    +
Sbjct: 150 WVELGLQTIHEDTAKLIRRGYALPVFEDAYRRLKAAGLTVIVHVILGLPGESREQMLETV 209

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMH 219
                  VD + L  L + KGT    ++
Sbjct: 210 NYLGKLHVDGIKLQLLHVLKGTDLADLY 237


>gi|254696401|ref|ZP_05158229.1| hypothetical protein Babob28_01463 [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 388

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 105 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 157

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 158 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 215

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 216 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 275

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 276 VNYAQAYSFKYSPRPGTP 293


>gi|298529259|ref|ZP_07016662.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510695|gb|EFI34598.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 565

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 16/193 (8%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F     R+      F+       +  ++       S   F       +
Sbjct: 194 CPSNCSFCGSPEFWGRKVRFHSP-AYFVDMLQ---ELYKKGVTFFFFSDDTF------TL 243

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +P+    +++           +     +  + V+       R+AG  +IS G++S   + 
Sbjct: 244 KPE---RVIEICRLIINRGLKISWFAISRVNCVDEEMLTWMRRAGCIQISYGIESGSPKI 300

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + L +     E   A               IY  P +T       +             
Sbjct: 301 RKALNKKTGNQEIQTAFEQTVACGILARAYFIYGSPGETRETIRESMDLMERIKPLSAVF 360

Query: 205 YQLTIEKGTLFYK 217
           Y L +  GT  Y+
Sbjct: 361 YILEMFPGTALYR 373


>gi|52081532|ref|YP_080323.1| hypothetical protein BL00062 [Bacillus licheniformis ATCC 14580]
 gi|52786911|ref|YP_092740.1| YtqA [Bacillus licheniformis ATCC 14580]
 gi|319647442|ref|ZP_08001663.1| hypothetical protein HMPREF1012_02702 [Bacillus sp. BT1B_CT2]
 gi|52004743|gb|AAU24685.1| Conserved hypothetical protein YtqA [Bacillus licheniformis ATCC
           14580]
 gi|52349413|gb|AAU42047.1| YtqA [Bacillus licheniformis ATCC 14580]
 gi|317390488|gb|EFV71294.1| hypothetical protein HMPREF1012_02702 [Bacillus sp. BT1B_CT2]
          Length = 322

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 73/222 (32%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C              N     +T+   +R     +     +             +++
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLITQFNEVRDRMHEKWKDGKYMAYFQAFTNTHAPVSV 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +       +   V ++I   P  +  +  +   +        + LG+Q++ E++   +
Sbjct: 110 LREKYETVLGLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTADLI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L 
Sbjct: 170 NRAHDFDCYVEGVNKLRKHGIRVCSHIINGLPLEDRGMMMETAKAVADLDVQGIKIHLLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   S++  V L      I     +  
Sbjct: 230 LLKGTPMVKQYEKGKLTFLSQDEYVQLVCDQLEILPPEMIIH 271


>gi|118581231|ref|YP_902481.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118503941|gb|ABL00424.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 476

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 72/197 (36%), Gaps = 22/197 (11%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  KC YC     F+    R +  +  +  I+     +  MR+L+      +        
Sbjct: 206 CPSKCIYCLWPQTFSGQRMRTRSARNVYEEIKWITENIPEMRELSFDDDTFTANREH--- 262

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                + +A ++  +  +WT+++      E           +  R+ G+  + +G +S  
Sbjct: 263 ----AREVARLIKPLGISWTINARANTDYET---------LRVMRECGLRHVVVGFESGN 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            Q L+ + +  +  +AI  +   + +   +    I  LP +T       +  A    ++ 
Sbjct: 310 AQILKNIKKGVSKEQAIQFVKDCKKLGLSIHGAFIMGLPGETRETIAETINYAKQLDLNS 369

Query: 202 LSLYQLTIEKGTLFYKM 218
           +     +   GT FY M
Sbjct: 370 IQASLASPYPGTEFYTM 386


>gi|163781959|ref|ZP_02176959.1| oxaloacetate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883179|gb|EDP76683.1| oxaloacetate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 441

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 19/219 (8%)

Query: 10  NMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP 68
           +   +  N    YV     C K C YC     V + +  + +  +S  + ++ +++L   
Sbjct: 139 DFPTERDNPYCAYVTIIKGCDKNCTYC----VVPKTRGKERS--RSMYSILEEVKKLV-D 191

Query: 69  RSISSIFFGGGTPSLIE-----PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
             +  I   G   +        P   + +L  ++K   V      T   +P  +  +  +
Sbjct: 192 EGVREIHLLGQNVTAWGKDFERPIPFSELLYEVSKVDGVERIRFTT--GHPKDLTDDTVE 249

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYAL 179
                    N + L  Q+  ++ L  + R +     +  I+  +     +  S D+I   
Sbjct: 250 AMADIPQVCNALHLPFQAGSDRILELMDRKYTKEFYLDRINRLKEAVEDIALSTDIIVGF 309

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           P +T   +E  L        + +  ++ +   GT   +M
Sbjct: 310 PTETDEDFEHTLDVVREVEFEQVFSFKYSPRPGTPAAEM 348


>gi|17228807|ref|NP_485355.1| hypothetical protein alr1312 [Nostoc sp. PCC 7120]
 gi|81772425|sp|Q8YXA3|MIAB_ANASP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|17130659|dbj|BAB73269.1| alr1312 [Nostoc sp. PCC 7120]
          Length = 454

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 65/198 (32%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q     +   EM+ + +  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPAAVRAEMEELGRQ-GYKEITLLGQNIDAYGRDLPG 212

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                +++    D +     V     I     +P        +   +         +  Q
Sbjct: 213 ATPEGRHLHTFTDLLYYVHDVPGVERIRFATSHPRYFTERLIKACAELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + Q L+ + R +   +    I   R   P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNQLLKAMARGYTQEKYRRIIDTIRRYMPDASISADAIVGFPGETEEQFENTLKLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|311069540|ref|YP_003974463.1| putative Fe-S oxidoreductase [Bacillus atrophaeus 1942]
 gi|310870057|gb|ADP33532.1| putative Fe-S oxidoreductase [Bacillus atrophaeus 1942]
          Length = 322

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLITQFNDIKERMHEKWKDGKYIAYFQAFTNTHAPVEV 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + +     +   V I+I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 110 LREKFESV---LALDGVVGISIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+ +     +H  R    R+   +I  LP +         +      V  + ++
Sbjct: 167 LLINRAHDFNCYAEGVHKLRKHGIRICSHIINGLPLEDRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L + KGT   K ++ G L   +++ 
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLTQDE 252


>gi|297519636|ref|ZP_06938022.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Escherichia
           coli OP50]
          Length = 271

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
             ++P     +  + YR     V+ + L VQS  ++ L  +GR H A E  A I    A 
Sbjct: 34  TTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAA 93

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
               ++S D I   P +T   +E  ++       D    +  +   GT    M       
Sbjct: 94  RPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVD----D 149

Query: 226 LPSENVAVDLYNLTQSITSAHG 247
           +P E     LY L + I     
Sbjct: 150 VPEEEKKQRLYILQERINQQAM 171


>gi|239833202|ref|ZP_04681531.1| RNA modification enzyme, MiaB family [Ochrobactrum intermedium LMG
           3301]
 gi|239825469|gb|EEQ97037.1| RNA modification enzyme, MiaB family [Ochrobactrum intermedium LMG
           3301]
          Length = 462

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 29/246 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +     
Sbjct: 179 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGA 231

Query: 86  -----PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 232 GDDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 289

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   R + P   +S D I   P +T   +E  +Q    
Sbjct: 290 SGSDRILKAMNRRHKADEYVRLIERIREVRPDMALSGDFIVGFPGETDQDFEDTMQLVRE 349

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                   ++ +   GT            L             Q + +      Y   + 
Sbjct: 350 VNYAQAYSFKYSPRPGTPGA--------DLDDHVEEAVKDERLQRLQALLSEQQYAFQD- 400

Query: 257 SFLGAE 262
           S +G E
Sbjct: 401 SMIGRE 406


>gi|219847746|ref|YP_002462179.1| Radical SAM domain-containing protein [Chloroflexus aggregans DSM
           9485]
 gi|219542005|gb|ACL23743.1| Radical SAM domain protein [Chloroflexus aggregans DSM 9485]
          Length = 583

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 16/215 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HV      +       L EM  ++++     +  I F     +     
Sbjct: 308 CPAGCRYC--IKHVTYQSSVRHRSPHHVLQEMIMLKEMG----LRHIHFEADLFT----- 356

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS--SVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +         +  +   +++    N     V+ +  +  RKAG   I+ G++S  E+ L
Sbjct: 357 -VKKEFVYDLCHTIIKEGIKLRWSCNSRVDFVDEDELRLMRKAGCFMIAWGLESGSEEVL 415

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD-LIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +   +          I  +      M++   I  LP +T+   +  +  +    +D    
Sbjct: 416 KRARKGTTVKRIEETIAASHRAGI-MNWGYFIIGLPGETVETIQQTIALSKRLPLDIALF 474

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +  T   GT FY        +  ++    D+Y+ T
Sbjct: 475 HIATPYPGTPFYYEAVANGWIRMNQWEDYDMYSHT 509


>gi|329939964|ref|ZP_08289246.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Streptomyces
           griseoaurantiacus M045]
 gi|329300790|gb|EGG44686.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Streptomyces
           griseoaurantiacus M045]
          Length = 499

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 135 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDVLAEVEA 192

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 193 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNIEGLERVRF--TSPHPRDFTDD 250

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
             +   +    + ++ + +QS  +  L+ + R++     +  I    A      ++ D+I
Sbjct: 251 VIEAMAETPNVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAIPHAAITTDII 310

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT    M
Sbjct: 311 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAATM 352


>gi|319952447|ref|YP_004163714.1| tRNA-i(6)a37 thiotransferase enzyme miab [Cellulophaga algicola DSM
           14237]
 gi|319421107|gb|ADV48216.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cellulophaga algicola DSM
           14237]
          Length = 480

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 77/211 (36%), Gaps = 25/211 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    QS L E+Q +         L G    S +++GGG 
Sbjct: 178 CDNMCTFC---VVPFTRGRERSREPQSILKEIQDLHDSNFKEVTLLGQNVDSYLWYGGGL 234

Query: 81  ------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  + +      N + +LD +AK +        T  +NP  + ++  +   K    
Sbjct: 235 KKEFEKATDMQKATAVNFSSLLDTVAKKFPKMRIRFST--SNPQDMTLDVIETVAKHKNI 292

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
            N I L VQS   + L+ + R H   E I  I   R I P   +S D+I   P +T    
Sbjct: 293 CNHIHLPVQSGSNRILKEMNRLHTIEEYITLIDNIRRILPDCAISQDMISGFPTETEEDH 352

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +  +        D   +Y  +   GT+  + 
Sbjct: 353 QATIDVLKRVQYDFGYMYSYSERPGTMAARK 383


>gi|306821367|ref|ZP_07454975.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550585|gb|EFM38568.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 296

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 90/239 (37%), Gaps = 23/239 (9%)

Query: 32  CPYCDFNS----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +C         +R  K  +E+F+ +              R I  IF   G   ++  +
Sbjct: 30  CTFCAMYKEARFKIRSLKDIKEDFLYAKAHY----------RGIDRIFLADGDALIMPFE 79

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQS 144
           ++  IL  I + +     V  ++ A+P S+        +  R   +    LG++S  ++ 
Sbjct: 80  DLLEILKFIEELFPNLDRV--SLYASPRSILSKTKEQLETLRAHNLKLAYLGIESGSDKV 137

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHL 202
           L+ + +   A E I A  L R    ++S  LI  L     +    +  ++   +   D+L
Sbjct: 138 LKDIKKRATADEIIRAGKLIRQAGIKLSATLIMGLGGVKDSKEHVKGSIEVLNAINPDYL 197

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS--ITSAHGLHAYEISNHSFL 259
            L  L ++ GT  Y   ++G  +  +    +                + +  +SN++ +
Sbjct: 198 GLMTLLVKSGTEIYDDVQEGKFIQLTPEEILLETLELIKGVELKDTVVRSNHVSNYAHV 256


>gi|260892471|ref|YP_003238568.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
 gi|260864612|gb|ACX51718.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
          Length = 447

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +++L           G    +    L
Sbjct: 161 CNNFCTYC-----IVPYVRGKERS-RRPEDILREVKELAKEGYREIFLLGQNVNAYGKGL 214

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  +     +      T  ++P     +  +   +         L VQ+  
Sbjct: 215 QPPVTFADLLRQLNAVEGIWRIRYTT--SHPRDFGEDLIRAVAELPKVCENFHLPVQAGS 272

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR +GR +   + +  +   R +      S D++   P +T   +E  L        
Sbjct: 273 DKILRRMGRGYTRQDYLNLVRRIREVLPQASFSTDIMVGFPGETEEDFEQTLLLVREVGF 332

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           D   ++      GT        
Sbjct: 333 DQAFIFIYNPRPGTPAASFPDQ 354


>gi|256045537|ref|ZP_05448420.1| MiaB-like tRNA modifying enzyme [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112265|ref|ZP_05453186.1| MiaB-like tRNA modifying enzyme [Brucella melitensis bv. 3 str.
           Ether]
 gi|260562847|ref|ZP_05833333.1| elongator protein 3 [Brucella melitensis bv. 1 str. 16M]
 gi|265991963|ref|ZP_06104520.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993696|ref|ZP_06106253.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|260152863|gb|EEW87955.1| elongator protein 3 [Brucella melitensis bv. 1 str. 16M]
 gi|262764677|gb|EEZ10598.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003029|gb|EEZ15322.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 427

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 79/205 (38%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    +      +  +++L G          +    +G   
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 81  PSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
           PS +    +   +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I     AR + P + F  D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|256822063|ref|YP_003146026.1| MiaB-like tRNA modifying enzyme [Kangiella koreensis DSM 16069]
 gi|256795602|gb|ACV26258.1| MiaB-like tRNA modifying enzyme [Kangiella koreensis DSM 16069]
          Length = 447

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 77/196 (39%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C YC            +   IQ  + E+ Q   +      ++ +  GG    +   
Sbjct: 145 CRYRCTYC---IVTVARGEERSRTIQDLVDEVNQLHAEGVQEIVLAGVHVGGYGSDI--D 199

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSL 145
            ++  +++ I ++  +      ++E  P  +  N F+ +     +  + L +QS  +  L
Sbjct: 200 SSLYELVETILRDTDMPRIRFASVE--PWDLGENFFELFANPRLMPHMHLPIQSGADTVL 257

Query: 146 RFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R    S     ++ A+       ++ D+I   P +T  ++E+ +Q        H+ 
Sbjct: 258 RRMSRRCKTSSFSELVNQAKTQVAGFNVTTDVIVGFPGETDEEFELTMQYIEEVGFGHIH 317

Query: 204 LYQLTIEKGTLFYKMH 219
           ++  +  +GT   ++ 
Sbjct: 318 IFTYSDREGTKAARLP 333


>gi|56963428|ref|YP_175159.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
 gi|56909671|dbj|BAD64198.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
          Length = 445

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 84/233 (36%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEVVRQAQQLVHAGYKEIVLTGIHTGGYGEDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++A +L+ + K   +      +IEA+   +         K+   V  + + +QS  +  L
Sbjct: 210 SLARLLEDLEKVEGLKRLRISSIEAS--QLTDEVIAVIGKSSKVVRHMHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +     I   +   PR++   D+I   P +T  +++        +    L 
Sbjct: 268 KRMRRKYTMAAYEERIEKLKQALPRLAITSDVIVGFPGETEEEFQETYDFIAKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEI 253
           ++  ++  GT   +M    D  + +E V   +     L +   S+      E+
Sbjct: 328 VFPYSMRTGTPAARMTDQIDEAIKNERVHRLIELSNQLAKEYASSFENEVLEV 380


>gi|121998404|ref|YP_001003191.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Halorhodospira halophila SL1]
 gi|121589809|gb|ABM62389.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Halorhodospira halophila SL1]
          Length = 558

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 9/192 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       ++K  ++  I+     +  + +L     +         P++   +
Sbjct: 204 CPFTCSFCS------QWKFWRDYRIRDPKKVVDEIEKLADEHDVGFFILADEEPTI-NRK 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
                   +         +   I    + V  +      YRKAG+  +SLG ++  +  L
Sbjct: 257 KFIEFCQELIDRGLPDRGILWGINTRVTDVLRDEELLSFYRKAGLIHVSLGTEAAAQLKL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +    ++   AI L RN    +    I  L  +T    E   Q A  +  D  +  
Sbjct: 317 DRFNKETTVAQNKKAIELLRNAGIVVEAQFIVGLENETAETLEETYQMAQDWKPDLANWA 376

Query: 206 QLTIEKGTLFYK 217
             T    +  ++
Sbjct: 377 MYTPWPFSDLFR 388


>gi|166367538|ref|YP_001659811.1| tRNA-i(6)A37 modification enzyme [Microcystis aeruginosa NIES-843]
 gi|229890619|sp|B0JVM6|MIAB_MICAN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|166089911|dbj|BAG04619.1| tRNA-i(6)A37 modification enzyme [Microcystis aeruginosa NIES-843]
          Length = 446

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q     +   EM  + Q  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPGVRGVEQSRTPAAIRAEMAQLGQQ-GYQEITLLGQNIDAYGRDLPG 212

Query: 83  L-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +++    D +     V+    +     +P        +  ++         +  Q
Sbjct: 213 VTASGRHLHNFTDLLYYVHDVAGIERLRFATSHPRYFTERLIKACQELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R++ P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNDILKAMKRGYTQEKYRQIIANIRDLMPDAAISADAIVGFPGETEAQFENTLKLVDE 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|163797130|ref|ZP_02191085.1| tRNA 2-methylthioadenosine synthase [alpha proteobacterium BAL199]
 gi|159177646|gb|EDP62199.1| tRNA 2-methylthioadenosine synthase [alpha proteobacterium BAL199]
          Length = 454

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 63/200 (31%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C       R            +   + +    G   I+ +      + G   +
Sbjct: 152 CDKFCTFC--VVPYTRGAEFSRPAADVLVEARRMVA--GGTVEITLLGQNVNAYHGEAAT 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  ++  +A+   +      T  ++P  V+      +R     +  + L VQS 
Sbjct: 208 GGGTWGLGRLVRALAEIDGLERIRYTT--SHPRDVDDELIAAHRDVPELMPYLHLPVQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A      I   R+  P    S D I   P +T   +   L+      
Sbjct: 266 SDRILAAMNRKHTAEAYRRIIDRLRDARPDLAFSSDFIVGFPGETDQDFVETLRLVREVG 325

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
                 ++ +   GT    M
Sbjct: 326 YAQAYSFKYSARPGTPAADM 345


>gi|148658313|ref|YP_001278518.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
 gi|148570423|gb|ABQ92568.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
          Length = 576

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 10/212 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HV      +    Q  L EM  ++++     +  I F     ++ + +
Sbjct: 309 CPAGCRYC--IKHVTYQASVRHRSPQHVLEEMYMLKEMG----MHHIHFEADLFTV-KKE 361

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  + + I K+      ++ +  +    V+       +KAG   I+ G++S  E  L+ 
Sbjct: 362 FVYDLCNAIIKDGI---KLQWSCNSRVDFVDEEELALMKKAGCFMIAWGLESGSEAVLKR 418

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +          IH +R +  +     I  LP +T+   +  +  +    +D    +  
Sbjct: 419 ARKGTTVKRIEETIHASRKVGIKNWGYFIIGLPGETVETIQQTIALSKRLPLDIALFHIA 478

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           T   GT FY    +   +        D+YN T
Sbjct: 479 TPYPGTPFYYEAVENGWIQMDRWEDYDMYNHT 510


>gi|310659767|ref|YP_003937488.1| radical sam domain-containing protein [Clostridium sticklandii DSM
           519]
 gi|308826545|emb|CBH22583.1| Radical SAM domain protein [Clostridium sticklandii]
          Length = 448

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 91/244 (37%), Gaps = 26/244 (10%)

Query: 32  CPY-CDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-GTPSLIEPQ 87
           CP+ CDF  NS    +K      I+  + E++ +R     R I  I     G PS     
Sbjct: 169 CPFECDFCYNSSQSVHKAYINRPIEDVIREIKTLR----TRHIMFIDDNFIGNPSW---- 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                   +A+   +       + +N   +  +     +++G   + +G +S+ ++++  
Sbjct: 221 ----TKKFLAQIKPLGLKYNAAVTSNIVDM-PDILDDLKESGCQSLFIGFESINDKAIDS 275

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +   +  +    +         ++   ++ L +   + +E  L   +   ++ ++ + 
Sbjct: 276 VNKVQNSVGKYERLVEELHKRGIMINASFVFGLDEDDSSVFEKTLDWIVKNKIETVTSHI 335

Query: 207 LTIEKGTLFY----KMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAY-EISNHSF 258
           LT   GT  Y    K  +  D  L   N A  +Y   N+TQ       L  Y E+ +   
Sbjct: 336 LTPYPGTRLYENLHKQGRITDFDLSKYNTANVVYRPKNMTQEELYEGYLWIYKEVYSFKN 395

Query: 259 LGAE 262
           +   
Sbjct: 396 IIKR 399


>gi|320107085|ref|YP_004182675.1| MiaB family RNA modification protein [Terriglobus saanensis SP1PR4]
 gi|319925606|gb|ADV82681.1| RNA modification enzyme, MiaB family [Terriglobus saanensis SP1PR4]
          Length = 452

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 62/220 (28%), Gaps = 13/220 (5%)

Query: 5   SAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
             ++   T + +   G Y+     C K C YC            +     S L E + M 
Sbjct: 145 ETFDTEFTARSNPHRG-YITIIEGCDKFCSYC---VVPYTRGKERSRTSDSVLAEARRMA 200

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNF 122
            +           G    S  +        + +     ++    +     +P     +  
Sbjct: 201 DMGYT---DIQLLGQNVNSYRDSSGKRTFAEVLGAIGQMAGVRRVRFTTSHPRDFTQDII 257

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
                     + + L VQS     L+ + R +     +  I   +     +S   D+I  
Sbjct: 258 DVIDAVPQVCDHVHLPVQSGSSIVLKAMQREYTREWYLERIAWIKAAKREISMTTDIIVG 317

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +T   +E           D +  +Q +    T    M
Sbjct: 318 FPGETEEDFEQTASLLDEVGYDGVFAFQYSPRPNTPAIHM 357


>gi|326776162|ref|ZP_08235427.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Streptomyces cf. griseus XylebKG-1]
 gi|326656495|gb|EGE41341.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Streptomyces cf. griseus XylebKG-1]
          Length = 506

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    K   +          +P     +
Sbjct: 200 LVAEGVCEITLLGQNVNAYGSDIGDREAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPMQSGSDTILKAMRRSYRQERFLGIIEKVRAAMPEAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 318 VGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADM 359


>gi|310659093|ref|YP_003936814.1| hypothetical protein CLOST_1789 [Clostridium sticklandii DSM 519]
 gi|308825871|emb|CBH21909.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 454

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 75/223 (33%), Gaps = 11/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +S    +  ++ L        +  G    S  +  
Sbjct: 173 CDRFCSYC----IIPYTRGPVRS--RSINDIISEVKSLAKNGYKEVVLTGIHVASYGKDL 226

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D I     +     I      P  +  +     ++         L +QS  +  
Sbjct: 227 GDIRLIDVIKAINNIDGIHRIRTSSVEPLIITDDFLSELKEIDKFCPHFHLSLQSGSDSV 286

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R ++ +E  +A+   R I+P   ++ D+I   P ++  ++E          +  +
Sbjct: 287 LERMNRRYDKAEYKSAVDKIRKIYPDAAITTDIIVGFPGESDAEFEETRAYLEDINLYEM 346

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            +++ +  +GT    M       + +    V +    ++    
Sbjct: 347 HIFKFSPREGTKAAAMDNQVKPEIKNHRSEVLIELAKKNKLEF 389


>gi|291535256|emb|CBL08368.1| radical SAM protein, TIGR01212 family [Roseburia intestinalis
           M50/1]
          Length = 306

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 11/224 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQNI 89
           C +C   S            +      +   +++           +F   T +    + +
Sbjct: 47  CIFC---SAGGSGDFAAAPDLSVHAQILSAKKRIQAKTGCKKFIAYFQAYTNTYAPIEYL 103

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLR 146
             I     +   V++   ++I      +  +      +    +   I LG+Q++ +++L 
Sbjct: 104 RRIFTEAIEEPDVAA---LSIATRCDCLPPDVLDLLDELNRRKPVWIELGLQTIHDKTLH 160

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +      S+   A+         +   LI  LP +T       ++   S  V  + L  
Sbjct: 161 AIRSGFTLSQFEQAVSDLHKRNIPVITHLILGLPGETKEDMLSSVRYVGSLPVTGIKLQL 220

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L I KGT     +      L +     DL     ++     +  
Sbjct: 221 LHILKGTDLGTAYMADPFPLFTLEEYCDLIADCIALLPPEIVIH 264


>gi|158319633|ref|YP_001512140.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii
           OhILAs]
 gi|238065284|sp|A8MLX7|RIMO_ALKOO RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|158139832|gb|ABW18144.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii
           OhILAs]
          Length = 438

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 77/264 (29%), Gaps = 22/264 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC            Q  +I   + ++    +    + I  +       +     
Sbjct: 147 CDNHCTYCA-------IPNIQGPYISRTMEDILKEARNLAKQGIKELIVIAQDTTKYGLD 199

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  +L+ + K   +     + +   P S+     +   +     N   + +Q +
Sbjct: 200 IYGEARLPQLLEELCKIEDIEWVRFLYV--YPESITDELIKVVGENDKICNYFDIPIQHI 257

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R  + +     I   R   P +     LI   P +T   ++   +      
Sbjct: 258 SDSVLKRMNRKSDGASVRNIIEKIRREIPDVIIRTTLIVGFPGETEEDFKELYEFVEETK 317

Query: 199 VDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            D L ++  + E  T   K                +      +++        + Y++  
Sbjct: 318 FDKLGVFAYSKEDNTPAAKLKEQIHHATKKSRLRKIMALQEKISRESLEQKVGNVYKVLI 377

Query: 256 HSFLGAESLH-NLNYWRYGDYIGI 278
            S     + +    Y    D  G+
Sbjct: 378 ESRTKGGNYYIGRTYMDVPDMDGV 401


>gi|284929598|ref|YP_003422120.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [cyanobacterium UCYN-A]
 gi|284810042|gb|ADB95739.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [cyanobacterium UCYN-A]
          Length = 448

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 88/262 (33%), Gaps = 16/262 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +   E+    + ++ +  +V+  + C ++C YC          + Q    +   +E++ +
Sbjct: 133 IHIIEDITKPRRASKITAWVNIIYGCNERCSYC---VVPSVRGLEQSRTPEDICSEIKLL 189

Query: 63  RQLTGPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            Q  G + ++ +      +G   P +    +N     D + +   VS+   I     +P 
Sbjct: 190 EQQ-GYKEVTLLGQNIDAYGRDLPGTTETGRNQYTFTDLLYRIHEVSNIKRIRFATSHPR 248

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
                      +         +  QS +   L+ + R +        I   R   P  S 
Sbjct: 249 YFTERLISACHELPNICEHFHIPFQSGDNDILKKMKRGYTHQRYRQLIDKVRYYMPNASI 308

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             D I   P +T  Q+E  L+       D L+    +   GT      +  D  + S+ +
Sbjct: 309 TADAIVGFPGETEQQFENTLKLVEDIGFDQLNTAAYSPRPGTPAATWSEQVDDDIKSDRL 368

Query: 232 AVDLYNLTQSITSAHGLHAYEI 253
               + + Q        +  EI
Sbjct: 369 QRLNHLVGQKAAENSRKYLGEI 390


>gi|226324928|ref|ZP_03800446.1| hypothetical protein COPCOM_02720 [Coprococcus comes ATCC 27758]
 gi|225207376|gb|EEG89730.1| hypothetical protein COPCOM_02720 [Coprococcus comes ATCC 27758]
          Length = 503

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 16/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   ++    ++ +  L     +  +  G    S    L
Sbjct: 221 CNNFCSYC-----IVPYVRGRERS-RNPKDIIREIEGLVADGVVEVMLLGQNVNSYGKNL 274

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP   A +L  I K   +       + ++P  +          +      + L VQS  
Sbjct: 275 EEPMTFAQLLQEIEKIEGLERIRF--MTSHPKDLSDELIDVMAHSKKICKHLHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++     +  +   R   P +S   D+I   P +T   ++  L        
Sbjct: 333 SRILQKMNRHYTKEHYLEVVRKIREAVPDISLTTDIIVGFPGETEEDFQDTLDIVRQVRY 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT    M       +  +     L  + Q       +H 
Sbjct: 393 DSAFTFIYSKRTGTPAAAMEDQVPDDVVKDRFDRLLKEVQQISAEVCSVHQ 443


>gi|58616989|ref|YP_196188.1| hypothetical protein ERGA_CDS_02620 [Ehrlichia ruminantium str.
           Gardel]
 gi|58416601|emb|CAI27714.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 450

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 23/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--------MQWMRQLTGPRSISSIFFGGG 79
           C K C +C                +++   E        ++ +  +    +     + G 
Sbjct: 162 CNKFCSFC---VVPYTRGEEYSRTVEAIFKEALILADSGIKEITLIGQNVNAYHGTYKG- 217

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISLGV 137
                   ++  ++  IAK  ++      T  ++P  +  + ++     K  +  I L V
Sbjct: 218 -----NEWDLGRLIQHIAKISSIERIYYTT--SHPRDMHESLYEAHGIEKKLIPFIHLPV 270

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + LR + R H A E I  I   R     +  S D I   P +T   +E  ++   
Sbjct: 271 QSGSNKILRKMNRKHTAEEYINIIKTLRKHRSDIAYSSDFIVGFPGETDEDFENTIRLIE 330

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    ++ +   GT 
Sbjct: 331 EVKFSQAYSFKYSPRPGTP 349


>gi|229025211|ref|ZP_04181635.1| hypothetical protein bcere0029_35140 [Bacillus cereus AH1272]
 gi|228736144|gb|EEL86715.1| hypothetical protein bcere0029_35140 [Bacillus cereus AH1272]
          Length = 425

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 82/232 (35%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 137 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 192

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++D + K   V         ++P   + +  +   KAG  V  I L VQS  
Sbjct: 193 FE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKAGNLVEHIHLPVQSGS 248

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P    + D+I   P +T  Q+E  +        
Sbjct: 249 TEMLKIMARKYSREHYLELVRKIKEAIPNAVFTTDIIVGFPNETDEQFEETMSLYREVGF 308

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  + +  +   +   N   +  +    + Y
Sbjct: 309 DTAFTFIYSPREGTPAAKMKDNVPMEV--KKERLQRLNTLVNTLAIEKNNRY 358


>gi|210612282|ref|ZP_03289230.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
 gi|210151656|gb|EEA82663.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
          Length = 440

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S  + R     E+ +   + E+  + Q             G 
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPIERLLKEAEDLVAQGVKEIILVAQ--------ETTLYGK 205

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   +++  +L  + K   +       +   P  +     Q  ++     N + L +
Sbjct: 206 D--LYGEKSLHKLLRELCKISGLRWIR--ILYCYPEEITDELIQVIKEEDKICNYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  +  + +  I   R   P ++    LI   P +T  Q E  ++   
Sbjct: 262 QHASDGILKRMGRRTSKEQLVEIIGKLRKEIPDIAIRTTLITGFPGETQEQHEELMEFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L ++  + E+ T    M       +  E+   +L  L Q I
Sbjct: 322 EMEFDRLGVFTYSPEEDTPAAVMPDQIPEDV-KEDRQAELMELQQEI 367


>gi|73668263|ref|YP_304278.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
 gi|72395425|gb|AAZ69698.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
          Length = 377

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 32  CPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT----PSLIE 85
           C YC       R   +  +   + S +    +   L   R I+S  FG G+    P    
Sbjct: 156 CKYC----QTPRLFGREVRHRSVDSIVKNAGYYNDL---RFIASNAFGYGSDGIHPRF-- 206

Query: 86  PQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQ 143
              +  +L  + K             E  P  V   + +  RK   N  +SLG QS  ++
Sbjct: 207 -DKVEKLLSALHKLPDKKIFFGTFPSEVRPEFVTDESVELVRKYCANNSLSLGAQSGSDR 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LSYAVDH 201
            L+ + R H   ++I+A+          + D I+ LP +     E  L     +      
Sbjct: 266 ILKEIHRGHTVRDSISAVECCLEHGIVPAVDFIFGLPTEAEEDQEKSLDLVRWICKKGGT 325

Query: 202 LSLYQLTIEKGTLFYKMHK 220
           +  + LT   GT +     
Sbjct: 326 VRAHYLTPLPGTPYASAVP 344


>gi|319940867|ref|ZP_08015206.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Sutterella wadsworthensis 3_1_45B]
 gi|319805749|gb|EFW02530.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Sutterella wadsworthensis 3_1_45B]
          Length = 442

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R +      +   +   Q   Q     ++   ++    G     +
Sbjct: 158 CSKYCTYC--VVPYTRGEEISRPLVDVLVEVAQLADQGVKEVTLLGQNVNAYRGVTPEGD 215

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A++L+ +++   +      T  ++P          Y K    V+ + L VQ+  ++
Sbjct: 216 TADFAMLLEYVSEIDGIERIRYTT--SHPREFTQRLIDAYTKLPKLVSHVHLPVQAGSDR 273

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R ++  E  + I   +   P ++   D I   P +T   +E  ++       D 
Sbjct: 274 ILTAMKRGYSVLEYKSIIRRLKAARPGIAIATDFIVGFPGETAEDFEKTMRLIDDVGFDA 333

Query: 202 LSLYQLTIEKGTLFYKMH 219
              +  +   GT   ++ 
Sbjct: 334 SFSFVYSPRPGTPAARLP 351


>gi|293569440|ref|ZP_06680736.1| radical SAM protein, family [Enterococcus faecium E1071]
 gi|291587860|gb|EFF19712.1| radical SAM protein, family [Enterococcus faecium E1071]
          Length = 318

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           ++     F  E+  M Q         ++F   T +    + I  
Sbjct: 50  CTFCSVSGSGDMIVAPEDPLPIQFQKEIDMMHQKWPHVQQYIVYFQNFTNTHAPVEIIKK 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +     +   V +++   P  +         +        + LG+Q+  E++ + +
Sbjct: 110 RFEQV---VNLPGVVGLSVGTRPDCLPDEVVDYLAELNERMYLWVELGLQTTFEETSKLI 166

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +++   +  ++R  L   +  + L+ +
Sbjct: 167 NRAHDYQTYLDGVAKLRKHNIRVCTHLINGLPGESLEMMKENVRRTILDSDIQGIKLHLM 226

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            + + T   + + +G L L 
Sbjct: 227 HLMRKTRMLRDYHEGRLQLM 246


>gi|229134580|ref|ZP_04263390.1| hypothetical protein bcere0014_34890 [Bacillus cereus BDRD-ST196]
 gi|229168512|ref|ZP_04296235.1| hypothetical protein bcere0007_34690 [Bacillus cereus AH621]
 gi|228614918|gb|EEK72020.1| hypothetical protein bcere0007_34690 [Bacillus cereus AH621]
 gi|228648841|gb|EEL04866.1| hypothetical protein bcere0014_34890 [Bacillus cereus BDRD-ST196]
          Length = 509

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 72/206 (34%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G R I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIKEIRHLAA-NGYREITLLGQNVNAYGKDF-- 274

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              ++I   + D + +   +         ++P   + +      K G  V  I L VQS 
Sbjct: 275 ---EDIQYGLGDLMDELRKIDIARIRFTTSHPRDFDDHLIDVLGKGGNLVEHIHLPVQSG 331

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +       
Sbjct: 332 STDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSLYREVG 391

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL 224
            D    +  +  +GT   KM  +  +
Sbjct: 392 FDTAFTFIYSPREGTPAAKMQDNVPM 417


>gi|158421632|ref|YP_001522924.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Azorhizobium
           caulinodans ORS 571]
 gi|229890445|sp|A8IG00|MIAB_AZOC5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|158328521|dbj|BAF86006.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 464

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   ++++    +    + +  I   G   +    +
Sbjct: 163 CDKFCTFC-----VVPYTRGAE--VSRSVSKIVGEARALVDQGVREITLIGQNVNAFHGE 215

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L+ +A    ++     T  ++P  ++      +R     +  + L VQ
Sbjct: 216 GPDGRTWGLGRLLEELAGINGLARLRYTT--SHPRDMDDGLIAAHRDLPQLMPYLHLPVQ 273

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H        I   R   P +  S D I   P +T   +E  L  A  
Sbjct: 274 SGSDRILAAMNRKHGREIYFEIIDKLRAARPDIALSSDFIVGFPGETEADFEDTLDLARR 333

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +I  GT 
Sbjct: 334 VGFASAYSFKYSIRPGTP 351


>gi|126700065|ref|YP_001088962.1| putative radical SAM superfamily protein [Clostridium difficile
           630]
 gi|254976042|ref|ZP_05272514.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-66c26]
 gi|255093430|ref|ZP_05322908.1| putative radical SAM superfamily protein [Clostridium difficile CIP
           107932]
 gi|255101608|ref|ZP_05330585.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-63q42]
 gi|255307477|ref|ZP_05351648.1| putative radical SAM superfamily protein [Clostridium difficile
           ATCC 43255]
 gi|255315175|ref|ZP_05356758.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-76w55]
 gi|255517844|ref|ZP_05385520.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-97b34]
 gi|255650960|ref|ZP_05397862.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-37x79]
 gi|260684029|ref|YP_003215314.1| putative radical SAM superfamily protein [Clostridium difficile
           CD196]
 gi|260687689|ref|YP_003218823.1| putative radical SAM superfamily protein [Clostridium difficile
           R20291]
 gi|306520839|ref|ZP_07407186.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-32g58]
 gi|115251502|emb|CAJ69335.1| putative MiaB-like tRNA modifying enzyme [Clostridium difficile]
 gi|260210192|emb|CBA64398.1| putative radical SAM superfamily protein [Clostridium difficile
           CD196]
 gi|260213706|emb|CBE05587.1| putative radical SAM superfamily protein [Clostridium difficile
           R20291]
          Length = 432

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 9/210 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I S + E++ +        + +          ++ +
Sbjct: 152 CDRFCTYC---IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTGIHVASYGKDLKDR 208

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +I  +LD I +   +     I +    P            K         L +QS  +++
Sbjct: 209 DI-KLLDVIKQINQIEKIERIRLSSVEPILFTDEFVNEVLKMDKVCPHYHLSLQSGCDET 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E    +   R+  P ++   D+I   P +T  +++   +      +  +
Sbjct: 268 LKRMNRRYTTLEYKTIVDRLRSKMPDVAITTDVIVGFPGETNEEFKKTYEFLKEIELSQM 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            +++ +  KGT    M    D  +      
Sbjct: 328 HIFKYSPRKGTPAATMENQVDPQMKHFRSE 357


>gi|229890687|sp|Q5FHD1|MIAB_EHRRG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 445

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 23/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE--------MQWMRQLTGPRSISSIFFGGG 79
           C K C +C                +++   E        ++ +  +    +     + G 
Sbjct: 157 CNKFCSFC---VVPYTRGEEYSRTVEAIFKEALILADSGIKEITLIGQNVNAYHGTYKG- 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISLGV 137
                   ++  ++  IAK  ++      T  ++P  +  + ++     K  +  I L V
Sbjct: 213 -----NEWDLGRLIQHIAKISSIERIYYTT--SHPRDMHESLYEAHGIEKKLIPFIHLPV 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + LR + R H A E I  I   R     +  S D I   P +T   +E  ++   
Sbjct: 266 QSGSNKILRKMNRKHTAEEYINIIKTLRKHRSDIAYSSDFIVGFPGETDEDFENTIRLIE 325

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    ++ +   GT 
Sbjct: 326 EVKFSQAYSFKYSPRPGTP 344


>gi|121601992|ref|YP_989492.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bartonella bacilliformis
           KC583]
 gi|229890427|sp|A1UU39|MIAB_BARBK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120614169|gb|ABM44770.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bartonella bacilliformis
           KC583]
          Length = 458

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 14/204 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C +C                ++    E + + +           ++    G  +  
Sbjct: 175 CDKFCTFC---VVPYTRGAEISRSVEQITDEARQLIEADVKEITLLGQNVNGWHGQST-- 229

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSLE 141
                  + D +     +     +     +P  ++ +    +R   +    + L VQS  
Sbjct: 230 -DGKTWRLGDLLYHLAKLDGLKRLRYTTSHPRDMDESLIAAHRNLDILMPYLHLPVQSGS 288

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A + +  I   R   P ++F  D I   P +T   +E  ++       
Sbjct: 289 DRILKAMNRQHKAIDYLNLIEKIRTARPDIAFSGDFIVGFPGETDDDFEETIKLIEQVGY 348

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
                ++ +   GTL   M    D
Sbjct: 349 SSAYSFKYSPRPGTLGATMKNQVD 372


>gi|169824439|ref|YP_001692050.1| 2-methylthioadenine synthetase [Finegoldia magna ATCC 29328]
 gi|302380704|ref|ZP_07269169.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Finegoldia magna
           ACS-171-V-Col3]
 gi|229890534|sp|B0S1C0|MIAB_FINM2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|167831244|dbj|BAG08160.1| 2-methylthioadenine synthetase [Finegoldia magna ATCC 29328]
 gi|302311647|gb|EFK93663.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Finegoldia magna
           ACS-171-V-Col3]
          Length = 461

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 66/230 (28%), Gaps = 18/230 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            Q   ++S L+E+ + + Q     ++          +L  P
Sbjct: 179 CNNFCTYC---IVPYARGREQSRSVESILSEVKRMVDQGYKDITLLGQNVNSYGKTLENP 235

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                +L  +     +       + ++P  +     +   K       I L  Q+     
Sbjct: 236 VTFTELLTKVNDVEGLERLRF--LTSHPKDISDELIEAMGKLDKVCENIHLPFQAGSNSV 293

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +     +  +   +        S D+I   P +T   ++  L        +  
Sbjct: 294 LERMHRRYTKESYLEKVEKLKKSVKGITFSTDIIVGFPGETEEDFQDTLDVVRKVGYEQA 353

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++     GT         DL     +  V    L + +        YE
Sbjct: 354 FTFKYNRRPGT-------KADLFEDQVDEDVKQDRL-ERLLDVAYPIFYE 395


>gi|85714448|ref|ZP_01045436.1| 2-methylthioadenine synthetase [Nitrobacter sp. Nb-311A]
 gi|85698895|gb|EAQ36764.1| 2-methylthioadenine synthetase [Nitrobacter sp. Nb-311A]
          Length = 422

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 73/208 (35%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSL--- 83
           C  +C +C     +  +  G      + +  +   +R L     +  +  G    S    
Sbjct: 153 CDHRCTFC-----IIPFGRGNSR--SAPMNVIVDQVRALVEAGHVEVVLTGVDLTSYGAD 205

Query: 84  IEPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRIS 134
           +  +      +  IL  + +   +  +   +IEA+   ++               +  + 
Sbjct: 206 LPGRPRLGGLVKQILQRVPEMTRLRISSIDSIEADRDLLDAVANEERL-------MPHLH 258

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQ 192
           L +QS ++  L+ + R H+  EAI      R + P +    D+I   P +T   +   L 
Sbjct: 259 LSLQSGDDIILKRMKRRHSRREAIEFCAQVRRLRPDVALGADIIAGFPTETDDMFARSLD 318

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                 +  L ++  ++  GT   +M  
Sbjct: 319 LVAECDLTFLHVFPYSLRPGTPAARMPP 346


>gi|160877069|ref|YP_001556385.1| radical SAM domain-containing protein [Shewanella baltica OS195]
 gi|160862591|gb|ABX51125.1| Radical SAM domain protein [Shewanella baltica OS195]
 gi|315269273|gb|ADT96126.1| Radical SAM domain protein [Shewanella baltica OS678]
          Length = 295

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 84/242 (34%), Gaps = 18/242 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
            C +CD   + +  K  +   +     ++  + Q   P  +S +F   G    +    + 
Sbjct: 31  LCSFCD--MYTQPQKAFRAQKLDKVEQDILAVAQSGAP--VSRVFLADGDAMSLPFARLE 86

Query: 91  LILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            I + I ++   V+      +  N ++         R+ G++ + +G +S +++ L  + 
Sbjct: 87  AICELINRHLPQVTRISSYCLPRNLNNKTPEQLARLRELGLSLLYVGCESGDDEVLAKIQ 146

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQL 207
           +      ++AA+   R    + S  ++  L     +        +   +   D+LS   +
Sbjct: 147 KGETFESSLAALLKIRAAGMKSSVMILNGLGGVALSHQHAVNSAKLMNAAQPDYLSTLVV 206

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+  GT        G   LP     + L+    ++     L              S H  
Sbjct: 207 TLPLGTKRMDAVFGGQFQLPD---QMGLFQEMHTLLDHLELEQ--------TIFRSDHAS 255

Query: 268 NY 269
           NY
Sbjct: 256 NY 257


>gi|118443605|ref|YP_877565.1| biotin synthase [Clostridium novyi NT]
 gi|118134061|gb|ABK61105.1| biotin synthase [Clostridium novyi NT]
          Length = 348

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 16/194 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC    FN  V RY++  E+ +       +      G R+   +  GG  P  
Sbjct: 61  YCKNTCTYCGIRVFNKKVDRYRLSLEDILNCCSEGYRL-----GYRTF--VLQGGEDP-Y 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I + +      +  +  +       +++ Y  AG +R  L  ++  + 
Sbjct: 113 FTDDKIVEIVKNIKEKFK-----DCAVTLSIGEKSYESYKKYYDAGADRYLLRHETASKT 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L    +       +   + I  ++    +  +P QT   +  +L          + 
Sbjct: 168 LYEKLHPGMSFENRRRCLRDLKEIGYQVGAGFMIGIPGQTNEDFVKDLLFLKELEPHMVG 227

Query: 204 LYQLTIEKGTLFYK 217
           +     +  T    
Sbjct: 228 IGPFIPQCDTPLGN 241


>gi|88602458|ref|YP_502636.1| radical SAM family protein [Methanospirillum hungatei JF-1]
 gi|88187920|gb|ABD40917.1| Radical SAM [Methanospirillum hungatei JF-1]
          Length = 372

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGTP 81
           C   C YC     F + +R   +G    +     +++++         +++ +G  G  P
Sbjct: 144 CPYGCTYCQTPRIFGNTIRHRSIGSIVRLAHSFHDIRFLSP-------NALAYGTDGLHP 196

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVN-RISLGVQS 139
              +P++I  +L  +AK       +     E  P  V         +   N RI +G QS
Sbjct: 197 ---DPRHIRSLLHELAKIPDKDIFLGTFPGEIRPEFVSEEAVDLIARYCSNTRIHIGAQS 253

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YA 198
             E +L+ + R H  S+   AI    +       D+I   P +T  +    +        
Sbjct: 254 GAESTLKRIRRGHTLSDVWRAIDHTTDAGFTPVVDIIVGFPDETDEELLATVSFCREVSK 313

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + ++  ++     GT      
Sbjct: 314 IGYVHAHRFFSLPGTPLEGRV 334


>gi|320008158|gb|ADW03008.1| RNA modification enzyme, MiaB family [Streptomyces flavogriseus
           ATCC 33331]
          Length = 506

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGTIEGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 258 VIAAMAETPNVMPQLHMPMQSGSDTILKAMRRSYRQERFLGIIEKVRAAMPDAAISTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT   +M
Sbjct: 318 VGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAAEM 359


>gi|257886334|ref|ZP_05665987.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257822190|gb|EEV49320.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 318

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           ++     F  E+  M Q         ++F   T +    + I  
Sbjct: 50  CTFCSVSGSGDMIVAPEDPLPIQFQKEIDMMHQKWPHVQQYIVYFQNFTNTHAPVEIIKE 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +     +   V +++   P  +         +        + LG+Q+  E++ + +
Sbjct: 110 RFEQV---VNLPGVVGLSVGTRPDCLPDEVVDYLAELNERMYLWVELGLQTTFEETSKLI 166

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +++   +  ++R  L   +  + L+ +
Sbjct: 167 NRAHDYQTYLDGVAKLRKHNIRVCTHLINGLPGESLEMMKENVRRTILDSDIQGIKLHLM 226

Query: 208 TIEKGTLFYKMHKDGDLVLP 227
            + + T   + + +G L L 
Sbjct: 227 HLMRKTRMLRDYYEGRLQLM 246


>gi|169336950|ref|ZP_02863141.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
 gi|169296209|gb|EDS78342.1| coproporphyrinogen III oxidase [Clostridium botulinum C str.
           Eklund]
          Length = 108

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 12  TGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS- 70
             + S++L +Y+H PFC+ KC YC+  S     +     ++   + E++ +  +   R  
Sbjct: 40  ENRKSDNLTLYIHIPFCMNKCGYCNLFSTTAFNQYKMNKYVDKLIKEIKAVENILDLRDK 99

Query: 71  --ISSIFFG 77
               S+ FG
Sbjct: 100 SIFGSVIFG 108


>gi|219849842|ref|YP_002464275.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chloroflexus
           aggregans DSM 9485]
 gi|219544101|gb|ACL25839.1| RNA modification enzyme, MiaB family [Chloroflexus aggregans DSM
           9485]
          Length = 459

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 83/230 (36%), Gaps = 21/230 (9%)

Query: 23  VHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----- 74
           VH P    C   C YC       R    +   +   + E++ +    G + I+ +     
Sbjct: 158 VHVPIQYGCNMTCSYC---VIPLRRGRERSRPLPEIVEEVRRIVAR-GAKEITLLGQIVD 213

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            +G   P       +A +L+ +     +       + ++P+ +     +   +       
Sbjct: 214 SWGHDLP---GRPELADLLEAVDPIPGLLRLRF--LTSHPAWMTDRLIETVARLPRCQPE 268

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I+L VQ+  ++ L+ + R +  +   + I   R   P +S   D+I   P +T   +   
Sbjct: 269 INLPVQAGSDRVLKLMRRGYTVARYKSLIAKIRAAIPHISLTTDIIVGHPGETEEDFRQT 328

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           ++       D + +   +   GTL  +  +D  L +P +        L Q
Sbjct: 329 MELCAEIGFDKVHIAAFSARPGTLAAEQEQDPALAVPPDVKEERRRRLEQ 378


>gi|312622481|ref|YP_004024094.1| RNA modification enzyme, miab family [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202948|gb|ADQ46275.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 434

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 75/202 (37%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   ++S   E ++ +++      I+ I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRSLKSIEEEVIRLVQKGYKEFVITGINISSYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +     +         + + L +QS  ++
Sbjct: 206 DGKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNGEFIERLLSFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++  ++  + +   R  +  ++F  D+I   P +T   +   L          
Sbjct: 266 ILKLMNRHYTTAQYQSIVDRIREKWDDVAFTTDIIVGFPGETEEDFNATLDFVQKIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ + +KGT  Y+M    D
Sbjct: 326 IHVFRFSPKKGTKAYEMPNQVD 347


>gi|291522428|emb|CBK80721.1| SSU ribosomal protein S12P methylthiotransferase [Coprococcus catus
           GD/7]
          Length = 454

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 19/206 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC      +     + + +   + + + +        +  +       ++    
Sbjct: 162 CDKHCTYC---IIPKLRGSYRSHSMDYLIKQAESLAAQG----VKELNIVAQETTVYGTD 214

Query: 88  ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +  +L  + +   +S      +   P  +     Q  ++     + + L +Q 
Sbjct: 215 LYNGQKMLPELLKRLCRIEGLSWIR--VLYCYPEEINEELIQVIKEEPKICHYLDLPIQH 272

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSY 197
             +  L+ +GR    +E  + I   R   P ++    LI   P +T    +  LQ     
Sbjct: 273 GSDAVLKRMGRRTTQAELRSIIGRLREEIPDIALRTTLIAGFPGETEADHQEALQFVKDM 332

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
             D L ++  + E+GT   +M    D
Sbjct: 333 RFDRLGVFTYSEEEGTPAAQMPDQID 358


>gi|89053188|ref|YP_508639.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Jannaschia sp.
           CCS1]
 gi|122999629|sp|Q28UJ8|MIAB_JANSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|88862737|gb|ABD53614.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Jannaschia sp. CCS1]
          Length = 462

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 78/224 (34%), Gaps = 19/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    +    R +  I   G   +     
Sbjct: 181 CDKFCAFC-----VVPYTRGAE--VSRSAERLMAEARDLVDRGVREITLLGQNVNAYHGA 233

Query: 88  N------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +A ++  +AK   +      T  ++P+ +E +    +      +  + L VQ+
Sbjct: 234 GDGGTWGLARLIREMAKIDGLDRIRFTT--SHPNDMEDDLIAAHGDCPELMPYLHLPVQA 291

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A++ I  I   R+  P   +S D I   P +T   ++  L    + 
Sbjct: 292 GSDKILKAMNRKHTAADYIRLIDRIRDARPDLHLSGDFIVGFPGETEEDFQATLDLVETV 351

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                  ++ +   GT   +          S+ +      LTQ 
Sbjct: 352 GYGTAYSFKYSARPGTPAAERTGQVSEAEASDRLQRLQALLTQQ 395


>gi|261403097|ref|YP_003247321.1| MiaB-like tRNA modifying enzyme [Methanocaldococcus vulcanius M7]
 gi|261370090|gb|ACX72839.1| MiaB-like tRNA modifying enzyme [Methanocaldococcus vulcanius M7]
          Length = 414

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+  C YC         K+ + N I     ++    +    +    IF      +     
Sbjct: 143 CLGHCTYC-------IVKIARGNLISYPREKIVKKAEELIKKGTKCIFITAQDTACYGFD 195

Query: 88  NIALILDGIAKNWTVSSNVEITIEA----NPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
               + + +     +  +  + +      N   +     + Y+   V + + L +QS ++
Sbjct: 196 RNDNLANLLNDLCNIEGDFIMRVGMMHAKNVEEIIDELIEVYKTDKVGKFLHLPLQSGDD 255

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E    ++  R     + F  D+I   P +T  Q+E  L        D
Sbjct: 256 EILKKMRRGYTVDEFKEIVNEFRKKVKNLCFTTDIIVGFPGETEEQFENTLNILKELKPD 315

Query: 201 HLSLYQLTIEKGTLFYKM 218
           ++   + +  KGT   KM
Sbjct: 316 YIHGAKYSQRKGTEAAKM 333


>gi|237737681|ref|ZP_04568162.1| MIAB protein [Fusobacterium mortiferum ATCC 9817]
 gi|229419561|gb|EEO34608.1| MIAB protein [Fusobacterium mortiferum ATCC 9817]
          Length = 444

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 74/226 (32%), Gaps = 21/226 (9%)

Query: 7   YENNMTGQGSNSLGV-YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            + +   + + S+ + Y     C   C YC     +  Y  G+E  +      +  +RQ 
Sbjct: 144 LDADFDSKKTASISITY----GCNNFCAYC-----IVPYVRGRERSVP-MTEILHDVRQY 193

Query: 66  TGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                   I  G    S         N A +L+ I K       +   +  +P       
Sbjct: 194 VEKGYKEIILLGQNVNSYGKEFKNGDNFARLLEEICKVEG--DFIVRFVSPHPRDFTDEV 251

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
                K       + L +Q+     L+ + R +   + IA  +  +     ++   D+I 
Sbjct: 252 IDVIAKNEKIARSLHLPLQAGSSTILKAMNRGYTKEQYIALANKIKERILGVALTADVIV 311

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             P +T   ++  L        ++  ++  +I KGT    M    D
Sbjct: 312 GFPGETEEDFQDTLDVVRQIQFENSFMFMYSIRKGTKAATMENQID 357


>gi|312622276|ref|YP_004023889.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202743|gb|ADQ46070.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 471

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 23/261 (8%)

Query: 19  LGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +  +V+  + C   C YC            +    +  + E++ + Q  G + ++ +  G
Sbjct: 181 VSAFVNIIYGCNNFCSYC---IVPYVRGRERSRQPEEIIYEIEQLAQ-NGIKEVTLL--G 234

Query: 78  GGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
               S    L        +L+ + +   +     +T  ++P  +        R       
Sbjct: 235 QNVNSYGKDLGNNITFPKLLEKVNEIKGIERIRFVT--SHPKDLSDELIVAMRDLEKVCE 292

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R++   + +  +   +   P ++   D+I   P +T   +E 
Sbjct: 293 HIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFED 352

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAH 246
            L        D    +  +  +GT   KM       +  +        +  +        
Sbjct: 353 TLDVCRKVEFDSAYTFIYSKRRGTPAEKMPNQVPDNIKHQRFQRLVKLVEEIALKKNRQM 412

Query: 247 GLHAYEISNHSFLGAESLHNL 267
               YEI      G    +NL
Sbjct: 413 LGRTYEI---LIDGRSKRNNL 430


>gi|298529538|ref|ZP_07016941.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510974|gb|EFI34877.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 447

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S        +    ++   E++ ++Q      +S+I F     + ++PQ
Sbjct: 193 CPFNCSFCA--SSQLFGARWRAREPEAIFDEIEHVQQ---RYQVSNILFVDDNFT-LDPQ 246

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               I + I K      N++    +  +++    +  QG  ++GV  + LGV+S + + L
Sbjct: 247 RTVRISELICKK---DLNIQWLCFSRVNTIVENEDMVQGMAESGVRMMFLGVESPDPRVL 303

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +   A  +  A+ + +          I     +     +  ++ A           
Sbjct: 304 ESYNKKITAETSFRALEILKKYSIDALASFIIGNLNEDSRMIKNTIRFANKLNPKTAQFS 363

Query: 206 QLTIEKGTLFYKMHKDGDLVLPS-----ENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            LT   GT  Y   KD  L          +  +    +           AY +S +   G
Sbjct: 364 ILTPYPGTRLYNEVKDRILTFDWSRYDGMHATIKPDRVRAEELERLIKKAY-VSFYLHPG 422

Query: 261 A 261
            
Sbjct: 423 K 423


>gi|328885508|emb|CCA58747.1| tRNA-i(6)A37 methylthiotransferase [Streptomyces venezuelae ATCC
           10712]
          Length = 509

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 13/224 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFI--QSFLTE 58
           + L A+ + +  +  ++   +V     C   C +C     V   +  +E+          
Sbjct: 145 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC----IVPALRGKEEDRRPGDILAEI 200

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              + +     ++           L + +  + +L    +   +          +P    
Sbjct: 201 EALVAEGVSEITLLGQNVNAYGSDLGDREAFSKLLRACGQIEGLERVRF--TSPHPRDFT 258

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFD 174
            +      +    + ++ + +QS  +  LR + R++     +  I    A      +S D
Sbjct: 259 DDVIAAMAETPNVMPQLHMPLQSGSDSILRAMRRSYRQERFLGIIEKVRAAIPHAAISTD 318

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +I   P +T   +E  +         +   +Q +   GT    M
Sbjct: 319 IIVGFPGETEEDFEQTMHTVREARFANAFTFQYSKRPGTPAADM 362


>gi|225853371|ref|YP_002733604.1| MiaB-like tRNA modifying enzyme [Brucella melitensis ATCC 23457]
 gi|256263147|ref|ZP_05465679.1| elongator protein 3 [Brucella melitensis bv. 2 str. 63/9]
 gi|225641736|gb|ACO01650.1| MiaB-like tRNA modifying enzyme [Brucella melitensis ATCC 23457]
 gi|263093050|gb|EEZ17200.1| elongator protein 3 [Brucella melitensis bv. 2 str. 63/9]
 gi|326409934|gb|ADZ66999.1| MiaB-like tRNA modifying enzyme [Brucella melitensis M28]
 gi|326539647|gb|ADZ87862.1| MiaB-like tRNA modifying enzyme [Brucella melitensis M5-90]
          Length = 427

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 79/205 (38%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    +      +  +++L G          +    +G   
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 81  PSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
           PS +    +   +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I     AR + P + F  D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|154505306|ref|ZP_02042044.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149]
 gi|153794349|gb|EDN76769.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149]
          Length = 440

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K C YC       +F S      + +  ++       Q +++L      ++++     
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMEQLLSEAEYLAE-----QGVKELILVAQETTLYGKD-- 206

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L   +++  +L  + K   +       +   P  +     Q  ++     + + L +Q
Sbjct: 207 --LYGEKSLHKLLRELCKISGIRWIR--ILYCYPEEIYDELIQTIKEEPKICHYLDLPIQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              ++ L+ +GR     E I  I   R   P ++    LI   P +T  Q E  ++    
Sbjct: 263 HANDEILKRMGRRTTKQELIDIISKLRREIPDIALRTTLITGFPGETKEQHEELMEFVDE 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              D L ++  + E+ T   +M    +     E    +L  L Q I
Sbjct: 323 MEFDRLGVFTYSPEEDTAAARMEGQIE-EEVKEERQAELMELQQEI 367


>gi|160878566|ref|YP_001557534.1| putative radical SAM protein [Clostridium phytofermentans ISDg]
 gi|160427232|gb|ABX40795.1| conserved hypothetical radical SAM protein [Clostridium
           phytofermentans ISDg]
          Length = 313

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 14/224 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C              +   S   +++  ++    ++ S+    +F   T +      
Sbjct: 47  CIFCS----SGGSGDFATSMKLSITEQIEAAKERVAKKAKSNRYVAYFQAYTNTYAPVDY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I      +  +   V ++I   P        +   +    +   I LG+Q++ E S 
Sbjct: 103 LRSIFTEAMGHEDI---VALSIATRPDCFPDEVLRLLAELNQRKPIYIELGLQTIHENSA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R +       A++   N+   +   +I  LP ++       +       +  + L 
Sbjct: 160 KLIRRGYTLPIFEDALNRLSNLNIPVIVHVILGLPGESREMMLSTIDYLAKLPIHGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            + I K T     ++  +  L S     D  N           H
Sbjct: 220 LMHILKNTDLETFYR-KEPTLFSLLQLEDYINALVECLEHLPPH 262


>gi|325972105|ref|YP_004248296.1| radical SAM protein [Spirochaeta sp. Buddy]
 gi|324027343|gb|ADY14102.1| Radical SAM domain protein [Spirochaeta sp. Buddy]
          Length = 331

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 65/183 (35%), Gaps = 10/183 (5%)

Query: 49  ENFIQSFLTEMQWMRQLTGPR---SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN 105
           +  +   L++++  +     R      S++F   T +    +N+  + D           
Sbjct: 84  DQRVALILSQIERGKAFVQHRYKAQQYSLYFQSYTNTYDSIENLKTLYDTALSTHPF--- 140

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRFLGRNHNASEAIAAI 161
           VE  +   P  +                   + +G++S  +QSL  LGRNH+    I A+
Sbjct: 141 VEFIVSTRPDCLSQPVIDLLASYTTKVEKVWVEIGLESANQQSLDVLGRNHDTDCYIRAV 200

Query: 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                    +   ++  LP +    +    +       D + ++ L +  GT     H+ 
Sbjct: 201 DSLHLRGIGVCTHVMLGLPNEGRADYLATARLVNRVHSDAVKIHNLHVCLGTRLDDWHRQ 260

Query: 222 GDL 224
           G++
Sbjct: 261 GEV 263


>gi|218781957|ref|YP_002433275.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763341|gb|ACL05807.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 563

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 59/196 (30%), Gaps = 18/196 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R               M++       R + ++   G     +   
Sbjct: 191 CPHNCTFCGSPKFWGR--------------TMRFHSADYFVRQLHTLAKSGEKFFYVSDD 236

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                  L++    +      ++     +    V+ +     RKAG  +IS GV+S  E 
Sbjct: 237 TFTLKKDLVIRVCKEIIEAGLDISWNAISRVDRVDEDILYWMRKAGCIQISYGVESGCET 296

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +   L +N +  + + A  L            IY    +     +  L    +       
Sbjct: 297 TRDMLNKNMSTQDILRAFELTTRFGILSRAYFIYGCQGEGPEVLQANLDLMDAIKPLGAV 356

Query: 204 LYQLTIEKGTLFYKMH 219
            Y L I  GT  Y+ +
Sbjct: 357 FYILDIFPGTRLYEEY 372


>gi|317491143|ref|ZP_07949579.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316920690|gb|EFV42013.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 474

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 67/229 (29%), Gaps = 14/229 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT-PSLIEP 86
           C K C YC       R +              Q   Q     ++          PS    
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPADDVLFEIAQLAAQGVREVNLLGQNVNAYRGPSF--D 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +I    + +     +     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 GDICTFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIAVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H   E  + I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILNLMKRTHTVLEYKSIIRKLRKARPDILISSDFIIGFPGETQEDFEQTMKLIAEVNFDV 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +  +   GT    M       +P E     LY L   I      ++
Sbjct: 333 SYSFVFSPRPGTPAADMAD----DVPEEEKKQRLYILQDRINQQAQSYS 377


>gi|295099816|emb|CBK88905.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium cylindroides
           T2-87]
          Length = 477

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 11/229 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R K       Q      +   Q     ++           +    
Sbjct: 197 CDKFCTYC--IVPYTRGKQRSRTMDQILFEVKELYDQGYKEITLLGQNVNAYGKDIDPNM 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L+ +AK             ++P     +      K    +  + L +QS +++ L
Sbjct: 255 NFACLLEEVAKIGIPRIRF---TTSHPWDFSDDMIDVIAKYDNIMPFVHLPLQSGDDEIL 311

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + +GR + +   +   +       R+  S D+I   P ++  Q+E  L+       D+  
Sbjct: 312 KRMGRRYTSESYMELFNKIVTKIDRVAVSTDVIVGFPNESDEQFEHTLEIMEKCKFDNAF 371

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            +  +   GT   +M    D     E +A       +     +   AYE
Sbjct: 372 TFIFSPRPGTPAARMEDPIDFETKKERLARLNTLWNKYALEKN--KAYE 418


>gi|242374051|ref|ZP_04819625.1| conserved hypothetical radical SAM protein [Staphylococcus
           epidermidis M23864:W1]
 gi|242348241|gb|EES39843.1| conserved hypothetical radical SAM protein [Staphylococcus
           epidermidis M23864:W1]
          Length = 319

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 72/214 (33%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADPIEVQFQQIKSRMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKEEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQTTSDLINRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S++
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQD 249


>gi|170287904|ref|YP_001738142.1| MiaB-like tRNA modifying enzyme [Thermotoga sp. RQ2]
 gi|170175407|gb|ACB08459.1| MiaB-like tRNA modifying enzyme [Thermotoga sp. RQ2]
          Length = 434

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 74/198 (37%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC        R      E F + F    M+  +++     ++   +G    S +
Sbjct: 147 CDNTCTYCAIRLARGTRIRSKPLEIFKEEFAEMVMKGYKEIV-ITGVNLGKYGKDMGSSL 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +  I++ I  ++ V          N   V     + +++       + + VQS  +
Sbjct: 206 --AELLRIVEEIPGDYRVR-----LSSINVEDVNDEIVEAFKRNPRLCPHLHISVQSGSD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +  S+ +  +   R+I P  S   D+I   P +T   ++  L+        
Sbjct: 259 DVLKRMGRKYKISDFMRVVDKLRSIDPDFSITTDIIVGFPGETDADFQRTLELVEKVEFS 318

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + +++ +   GT   +M
Sbjct: 319 RVHIFRFSPRPGTPASRM 336


>gi|85374526|ref|YP_458588.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Erythrobacter
           litoralis HTCC2594]
 gi|123409590|sp|Q2N950|MIAB_ERYLH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|84787609|gb|ABC63791.1| 2-methylthioadenine synthetase [Erythrobacter litoralis HTCC2594]
          Length = 446

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 20/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC                  + + E + + +         I   G   S    +
Sbjct: 160 CDKFCTYC---VVPYTRGAEISRPFSALIDEAKKLVEAGA----KEITLLGQNVSAWTGE 212

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +       +A ++  +AK+  +      T  ++P+ ++      + +    +  + L VQ
Sbjct: 213 DAKGRALGMAGLIRELAKDPDLKRVRYTT--SHPADMDDELIATHGEVEKLMPYLHLPVQ 270

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R+H A   +  +    A      +S D I   P +T  ++E  L+    
Sbjct: 271 SGNDRVLKAMNRSHTAESYLRLLERFRAARPDLALSGDFIVGFPGETEAEFEDTLKIVDE 330

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                   ++ +   GT    M +     +  E +      L +   + +
Sbjct: 331 VRYAQAYSFKYSPRPGTPAATMERQVPKEVMDERLQRLQAALNRDQAAFN 380


>gi|295696236|ref|YP_003589474.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
 gi|295411838|gb|ADG06330.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
          Length = 484

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 73/196 (37%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC            +    +  + E++ + +  G R ++ +        L +  
Sbjct: 196 CNKYCTYC---IVPFTRGRERSRLPEDVVAEVKQLAE-EGIREVTLLGQNVNDYGLDLGD 251

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
            + A +L  +A+   +      T  +NP +            +A    I L VQS   + 
Sbjct: 252 VDFADLLQQVARIPGIERVRFTT--SNPWNFTDKLIDVIAAEEAICEHIHLPVQSGNNRI 309

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +     +  +   R+  P +S   D+I   P +T  +++  L    +   D+ 
Sbjct: 310 LKRMNRGYTRETYLQLVERIRDRIPGVSLTTDIIVGFPGETEEEFQDTLDLVRTVQFDNA 369

Query: 203 SLYQLTIEKGTLFYKM 218
             +  +  +GT   +M
Sbjct: 370 FTFLYSRRQGTAAARM 385


>gi|229018968|ref|ZP_04175810.1| hypothetical protein bcere0030_34820 [Bacillus cereus AH1273]
 gi|228742296|gb|EEL92454.1| hypothetical protein bcere0030_34820 [Bacillus cereus AH1273]
          Length = 509

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++D + K   V         ++P   + +  +   KAG  V  I L VQS  
Sbjct: 277 FE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKAGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P    + D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVFTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +    + Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNTLVNTLAIEKNNRY 442


>gi|313901066|ref|ZP_07834554.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium sp. HGF2]
 gi|312954024|gb|EFR35704.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium sp. HGF2]
          Length = 478

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E   +     ++ +R L           G    S     
Sbjct: 198 CDKFCTYC-----IVPYTRGKERS-RMMEDILEEVRILKAEGFKEITLLGQNVNSY---- 247

Query: 88  NIALILDGIAKNWTVSSNVEITIE------ANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
               +         +    +I IE      ++P            +    +  I L VQS
Sbjct: 248 -GKDLHMEGGFAGLLEETAKIGIERIRFTTSHPWDFTDEMIDVIARYENIMPFIHLPVQS 306

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
            +   L+ +GR +   + +   H  +   P   +S D+I   P +T  Q++  L      
Sbjct: 307 GDSDILKIMGRRYTREQYLTLFHKIKERIPHCAISTDIIVGFPNETEEQFQNTLSLVDEC 366

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D+   +  +  +GT    M  + +L               Q +     L+A E
Sbjct: 367 RFDNAFTFIYSPREGTPAASMADNVEL--------AVKQRRLQELNERWNLYARE 413


>gi|331085331|ref|ZP_08334417.1| hypothetical protein HMPREF0987_00720 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408114|gb|EGG87604.1| hypothetical protein HMPREF0987_00720 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 288

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 14/219 (6%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +CDF          ++         ++ + +L        +FF G    +IE + + 
Sbjct: 38  KCRFCDFAKDTFSLHSDEK-----IEENLKILSKLQPENP--RVFFLGENAFVIESERLL 90

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +   +          E  + +    V        +  +KAG++ + LG++S  +  L  
Sbjct: 91  RLFSLVRTYMP--QVKEFAMYSRIDDVLRKTPEELELLKKAGLSDLHLGLESGSDPILDV 148

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW--EMELQRALSYAVDHLSLY 205
           + +   +++     H+           +I  L  +T ++       +   +     +   
Sbjct: 149 MNKGVTSADMRKGFHMLDRAGIGYYVTVILGLGGRTFSRLHAIETAKFLNTIHPKDIWCL 208

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +L +  GT  Y+  K G     +    +    L     +
Sbjct: 209 KLHLFPGTPLYRESKRGHFDPMTPEEILREEYLLLENLT 247


>gi|159905287|ref|YP_001548949.1| radical SAM domain-containing protein [Methanococcus maripaludis
           C6]
 gi|159886780|gb|ABX01717.1| Radical SAM domain protein [Methanococcus maripaludis C6]
          Length = 369

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TP 81
           C   C +C     F  ++R          +S  + ++ ++ +   R ++   F  G  T 
Sbjct: 144 CPYNCRFCQTPQIFGKNIRH---------RSIESIVKIVKTMGDIRFVTPNAFSYGSKTG 194

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSL 140
           +  + + +  ++  + +            E  P  V         K   NR I  G QS 
Sbjct: 195 TKPDIEKLEKLMKSLFEIKKRLFFGTFPSEVRPEFVTFETLDLVNKYCDNRYIHFGAQSG 254

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++ L+ + R H  S+ I A+  +R        D I+  P +T  Q +  +         
Sbjct: 255 SDEVLKHIRRGHLVSDVITAVETSRECDLIPKVDFIFGFPDETEIQRKESIDLMKYIIKK 314

Query: 201 HLSLYQLTIEK--GTLFYK 217
           +  ++        GT F  
Sbjct: 315 NGKVHAHYFMPLCGTYFEN 333


>gi|138896383|ref|YP_001126836.1| hypothetical protein GTNG_2746 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267896|gb|ABO68091.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 319

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 63/194 (32%), Gaps = 13/194 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 53  CTFCS----AAGSGDFAGNRADDLVTQFHTIKEKMHQKWKDGKYLAYFQAFTNTHAPVEV 108

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + +     +   V ++I   P  +         +        + LG+Q++ E++ 
Sbjct: 109 LREKYETV---LGLDGVVGLSIATRPDCLPDEVVDYLAELNERTYLWVELGLQTIHERTA 165

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R H+    +  +   R    R+   LI  LP +T        +   +  V  + ++
Sbjct: 166 QLINRAHDFQCFVDGVQKLRRHGIRVCVHLINGLPLETYDMMMETAKTVAAMDVQGIKIH 225

Query: 206 QLTIEKGTLFYKMH 219
            L + K T   K +
Sbjct: 226 LLHLLKRTPMVKQY 239


>gi|110834795|ref|YP_693654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alcanivorax
           borkumensis SK2]
 gi|123345402|sp|Q0VN66|MIAB_ALCBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|110647906|emb|CAL17382.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 445

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 78/223 (34%), Gaps = 20/223 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-------GGTPSL 83
           C  YC F              +Q  L E+Q +  + G R ++ +          G     
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVQPVLKEIQHLADM-GVREVNLLGQNVNAYQGVGADGDT 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           ++  ++  ++        +     I     +P        Q Y      V+ + L VQS 
Sbjct: 216 LDLADLIRLI------RDIDGIDRIRYTTSHPVEFSEALIQVYEDVPELVSHLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + RNH   E  + +   + I P +SF  D I   P +T   +E  +       
Sbjct: 270 SDRILAMMKRNHMVLEYKSKLRKLKRIRPDISFSSDFIIGFPGETDRDFEDTMNLIHDIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
            D    +  +   GT    +  D D+ +  + +A+    + Q+
Sbjct: 330 FDMSFSFIYSARPGTPAADLPDDVDMEVKKQRLAILQQRINQN 372


>gi|253681310|ref|ZP_04862108.1| radical SAM protein, family [Clostridium botulinum D str. 1873]
 gi|253562548|gb|EES91999.1| radical SAM protein, family [Clostridium botulinum D str. 1873]
          Length = 310

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 76/229 (33%), Gaps = 21/229 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C YC      DF         G  NF I      ++ M +    +     +F   T +  
Sbjct: 48  CIYCSERGSGDF--------AGDRNFSISYQFNNIKEMMKNKWKQGKYIAYFQAYTNTYA 99

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLE 141
               ++ +     +       V + I   P  +         +        + LG+Q+  
Sbjct: 100 S---VSELRKKYEEAINQDGVVALAIATRPDCLSDEIINLISECNKKIYTWVELGLQTSN 156

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           E + + + R +       +++  RN    +    I+ LP +        ++      +  
Sbjct: 157 ENTAKIINRGYELPIFEDSLNRLRNKNIDVVVHTIFGLPGEEKEDMLNTIKYLREKDIQG 216

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + ++ L + KGT   K++  G L    ++  +D+     S+   + +  
Sbjct: 217 IKIHLLHLLKGTPMVKLYNQGKLKFLEQDEYIDIIIEAVSMLPQNIVIH 265


>gi|253699579|ref|YP_003020768.1| radical SAM protein [Geobacter sp. M21]
 gi|251774429|gb|ACT17010.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 488

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 85/265 (32%), Gaps = 29/265 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       +   G+    +  L     + ++   + ++ +     T + + P+
Sbjct: 221 CPVACSFC-----AIQATFGRSVRFRDPLFIADELDRMVREQKVNHVVIADDTFT-LNPE 274

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A I + ++++   S N     +   ++V     +  R+ G  +++ GV+S   + L  
Sbjct: 275 RAASICEILSRSGIRSWNC----DTRVNTVTPELLRLMRRCGCEKVAFGVESGSPRLLEL 330

Query: 148 LGRNHNASEAIAAIHLARNIFPR-MSFDLIYAL-PKQTMTQWEMELQRALSYAVDHLSLY 205
           +G+     +   A+  AR    R +  + I    P +T    E   +         +S+ 
Sbjct: 331 MGKGITVGQVERAVRWAREAGIRHVEGNFIIGCDPSETREDLEQTRRLIRGLPWSFVSVS 390

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI---------SNH 256
            +    GT   +      L+ P       +    +         A E+         S +
Sbjct: 391 VVVPYPGTPLREKMLAAGLIEPGVPWEDYVIFGKKPRWRTANFSAEELLGYQRSFTRSFY 450

Query: 257 SFLGA--------ESLHNLNYWRYG 273
                         S   L YW   
Sbjct: 451 LRPRYVLGQLAAIRSREELGYWSRA 475


>gi|222530603|ref|YP_002574485.1| biotin synthase [Caldicellulosiruptor bescii DSM 6725]
 gi|222457450|gb|ACM61712.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 351

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     NS  +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNSQAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+        + S+V++ I  +      + ++ ++ AG +R  +  ++  ++
Sbjct: 114 YTKDMLCSIIK------KIKSSVDVAITLSIGERSYDEYKAFKDAGADRFLMRFETSNKK 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R      +    I  +   +N+   +    +  LP QT+     ++        D + 
Sbjct: 168 LYRKYHPGMSFENRIECLKWIKNLGYELGTGFLIGLPGQTIDDLAQDILLVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|300775426|ref|ZP_07085288.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Chryseobacterium gleum
           ATCC 35910]
 gi|300506166|gb|EFK37302.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Chryseobacterium gleum
           ATCC 35910]
          Length = 478

 Score = 65.3 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 92/269 (34%), Gaps = 33/269 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---------PRSISSIFFGG 78
           C   C +C     V  +  G+E       + ++  + L            +++ S  + G
Sbjct: 179 CDNMCTFC-----VVPFTRGRERSRDP-HSIIEECKDLANNGYKEITLLGQNVDSYLWYG 232

Query: 79  GTP-------SLI---EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK 127
           G P       S +      N A +LD +AK       + I     NP  + ++ F+   K
Sbjct: 233 GGPKKDFAKASEMQKATAVNFAQLLDLVAKAV---PELRIRFSTSNPQDMSLDVFRMMAK 289

Query: 128 AG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQT 183
                  + L VQS     L  + R H   E +  I  A+ I P ++F  D+I     +T
Sbjct: 290 HDNICKYVHLPVQSGSNNMLAAMNRQHTREEYLDLIRKAKEIVPEVAFSQDMIVGFCNET 349

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               +  L        D+  ++  +   GT  +K  +D       +    ++  L   ++
Sbjct: 350 EEDHQDTLSLMREVEYDYGYMFAYSERPGTPAHKKMEDNIPADVKQRRLAEVIALQGELS 409

Query: 244 SAHGLHAYEISNHSFLGAESLHNLNYWRY 272
                      +   +   S  N N W+ 
Sbjct: 410 KKRMKSYVGREHQILIEGISKKNKNQWKG 438


>gi|322387484|ref|ZP_08061094.1| TIGR01212 family radical SAM protein [Streptococcus infantis ATCC
           700779]
 gi|321142013|gb|EFX37508.1| TIGR01212 family radical SAM protein [Streptococcus infantis ATCC
           700779]
          Length = 315

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E++   +
Sbjct: 99  IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYEETSELI 158

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 159 NRAHSYELYVETVKRLRKYPKIEIVAHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHL 218

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L  ++  V +      I   H +  
Sbjct: 219 LHLMTNTRMQRDYHEGRLQLMCQDDYVKVICDQLEIIPKHIVIH 262


>gi|297621452|ref|YP_003709589.1| miaB-methiolase [Waddlia chondrophila WSU 86-1044]
 gi|297376753|gb|ADI38583.1| miaB-methiolase [Waddlia chondrophila WSU 86-1044]
          Length = 439

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 19/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V   +  + +  +S    ++ ++QL           G    S  + Q
Sbjct: 156 CDKFCTYC----VVPYTRGPEVS--RSPEHIIEEIKQLADKGYKEVTLLGQNVNSYGKDQ 209

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    +L+ I +   ++      + ++P  +     +  R        +   +QS 
Sbjct: 210 PEWNCLFHDLLERIDQETGIARVRF--MTSHPVDITRELMEAIRDFDSLCEFVHFPIQSG 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + LR + R +   + +  + + + I P +S   D+I   P +T  +++M         
Sbjct: 268 SSRILRKMHRIYTLEQYMEKVQMLKEIVPNVSLGTDVIVGFPTETEEEFQMTYDAMKEIE 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                ++  +  KGT    M    D+    +   +      Q 
Sbjct: 328 YSVAFIFAYSPRKGTP--AMRWKDDIPEEVKQERLHRLMELQE 368


>gi|297191648|ref|ZP_06909046.1| methylase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151014|gb|EDY65490.2| methylase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 503

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 141 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEIEA 198

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 199 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNIEGLERVRF--TSPHPRDFTDD 256

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 257 VIAAMAETPNVMPQLHMPLQSGSDTILKAMRRSYRQERFLGIIEKVRAAIPHAAISTDII 316

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 317 VGFPGETEEDFEQTMHTVREARFANAFTFQYSKRPGTPAATM 358


>gi|150015722|ref|YP_001307976.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
           8052]
 gi|149902187|gb|ABR33020.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
           8052]
          Length = 432

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--------IFFGGG 79
           C + C YC    + R     ++   Q  L E++ + +      I S        +   G 
Sbjct: 150 CNRFCAYC-LIPYTRGTTCSKDP--QKVLDEIKNLSEHGFKEIILSGIHTASYGVDLDGN 206

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  +L+ I K   +      +IE  PS       +  +K      +  L +
Sbjct: 207 VT-------LITLLEEIEKLDGIERVRIGSIE--PSFFTDEVIEKMKKMKKLCPQFHLSL 257

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  + +L+ + R + A E   A++  R       ++ D+I   P +T  ++    +   
Sbjct: 258 QSGCDATLKRMNRRYTAKEYEDAVNRIRENLKDASITTDVIVGFPGETDEEFNETYEYLK 317

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +    +++ +  KGT    M    D
Sbjct: 318 RIKLTKTHIFKFSPRKGTKASDMPNQID 345


>gi|15899133|ref|NP_343738.1| hypothetical protein SSO2380 [Sulfolobus solfataricus P2]
 gi|284173752|ref|ZP_06387721.1| hypothetical protein Ssol98_03728 [Sulfolobus solfataricus 98/2]
 gi|13815682|gb|AAK42528.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261600882|gb|ACX90485.1| RNA modification enzyme, MiaB family [Sulfolobus solfataricus 98/2]
          Length = 421

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 21/212 (9%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            P    C   C +C   + + R K+        + +    +Q   +        +  +G 
Sbjct: 135 IPVADGCAGNCSFC--ITKLARRKLRSYPLREIVNAARDAIQSGAREIELTGQDTAAYG- 191

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA----NPSSVEVNNFQGYRKAGV-NRI 133
                ++      ++D + K   +  +  I I          +  +  +  R   V   I
Sbjct: 192 -----LDLGGSISLVDVVNKVADIDGDFMIRIGMMTPEQAMRIMDDLIEAIRNPKVYKFI 246

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L VQS +++ L+ + R +   E    I   R+  P ++   D+I   P +    +   L
Sbjct: 247 HLPVQSGDDRVLKLMNRKYTVDEYKELISEIRHKIPFVNITTDIIVGHPGEDEEAFNNTL 306

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                   + + L   +I   T    M +  D
Sbjct: 307 LLMKELRFERIHLAMYSIRPNTRSASMPQVPD 338


>gi|329113346|ref|ZP_08242127.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
           [Acetobacter pomorum DM001]
 gi|326697171|gb|EGE48831.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
           [Acetobacter pomorum DM001]
          Length = 472

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 69/196 (35%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + S L E + M + +G + I  +      + G  P 
Sbjct: 184 CDKFCSFC---VVPYTRGAESSRPVLSVLAEARRMVE-SGVKDICLLGQNVNAYHGEGPD 239

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +   +AK   +S      + ++P  ++      +R     +  + L VQ+ 
Sbjct: 240 G-STWGLPQLAYELAKLPGLSRIRY--MTSHPRDMDDALIAAHRDLPELMPFLHLPVQAG 296

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ LR + R H A E    +   R   P   +S D I   P +T   +E  +Q      
Sbjct: 297 SDRILRAMNRGHTADEYRDIVRRLREARPDLALSSDFIVGHPGETDEDFEATMQLVRDVG 356

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 357 FALAYSFKYSPRPGTP 372


>gi|258542174|ref|YP_003187607.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633252|dbj|BAH99227.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636311|dbj|BAI02280.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639364|dbj|BAI05326.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642420|dbj|BAI08375.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645475|dbj|BAI11423.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648528|dbj|BAI14469.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651581|dbj|BAI17515.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654572|dbj|BAI20499.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 472

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K C +C     V  Y  G E+  +S L+ +   R++   G + I  +      + G  
Sbjct: 184 CDKFCSFC-----VVPYTRGAESS-RSVLSVLAEARRMVESGVKDICLLGQNVNAYHGEG 237

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           P      ++  +   +AK   +S      + ++P  +       +R     +  + L VQ
Sbjct: 238 PDG-STWDLPQLAYELAKLPGLSRIRY--MTSHPRDMNDALIAAHRDLPQLMPFLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           +  ++ LR + R H A E    +   R   P   +S D I   P +T   +E  +Q    
Sbjct: 295 AGSDRILRAMNRGHTADEYRDIVRRLREARPDLALSSDFIVGHPGETDEDFEATMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VGFALAYSFKYSPRPGTP 372


>gi|210621065|ref|ZP_03292450.1| hypothetical protein CLOHIR_00393 [Clostridium hiranonis DSM 13275]
 gi|210155049|gb|EEA86055.1| hypothetical protein CLOHIR_00393 [Clostridium hiranonis DSM 13275]
          Length = 489

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 68/228 (29%), Gaps = 12/228 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R +              + +   T   ++          +L  P 
Sbjct: 203 CNNFCTYC--IVPYTRGRERSREPQDILDEIKELVANGTKEVTLLGQNVNSYGKTLENPM 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
             A +L  + K   +       + ++P  +        R        + L VQ      L
Sbjct: 261 TFAELLREVNKIEGLERIRF--MTSHPKDLSDEVIYAMRDCEKICEFLHLPVQCGSSALL 318

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++   + +  +   R   P +  S D++   P +T+   +  +        D   
Sbjct: 319 KKMNRHYTKEDYLNIVRKVRKEIPDIAFSTDIMVGFPGETLEDVQDTIDVIEETKYDSAF 378

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +  +  +GT   KM    +  +P +        + + +        Y
Sbjct: 379 TFIYSKREGTPAAKM----EDQIPEDEKHRRFDEVLEHVNRIVNDINY 422


>gi|186681269|ref|YP_001864465.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Nostoc
           punctiforme PCC 73102]
 gi|229890579|sp|B2IT24|MIAB_NOSP7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|186463721|gb|ACC79522.1| RNA modification enzyme, MiaB family [Nostoc punctiforme PCC 73102]
          Length = 454

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          + Q     +   EM+ + +  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGIEQSRTPSAIRAEMEELGRQ-GYKEITLLGQNIDAYGRDLPG 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +++    D +     V     +     +P        +   +         +  Q
Sbjct: 213 TTPEGRHLHNFTDLLYYVHDVPGIERLRFATSHPRYFTERLIKACAELPKVCKHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + + L+ + R +   +    I   R   P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNELLKAMARGYTHEKYRRIIDTIRRYMPDASISADAIVGFPGETEAQFENTLKLVED 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDMLNTAAYSPRPGTP 350


>gi|332710909|ref|ZP_08430845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Lyngbya majuscula 3L]
 gi|332350223|gb|EGJ29827.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Lyngbya majuscula 3L]
          Length = 448

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 86/258 (33%), Gaps = 16/258 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +   E+    +  +S+  +V+  + C ++C YC          + Q    ++   EM+ +
Sbjct: 132 IHIVEDITKPRRDSSISAWVNIIYGCNERCSYC---VVPNVRGLEQSRTPEAIRAEMEEL 188

Query: 63  RQLTGPRSISSI-----FFGGGTPSLI-EPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            +L G + I+ +      +G   P +    ++   + D +     V     +     +P 
Sbjct: 189 GRL-GYKEITLLGQNIDAYGRDLPGVTESGRHQHTLTDLLYYVSNVPGIERLRFATSHPR 247

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RM 171
                  +   +         +  QS +   L+ + R +   +    I+  R+  P   +
Sbjct: 248 YFVERLIRACHELPEVCEHFHIPFQSGDNDILKAMARGYTHQKYRRIINTIRDYMPDASI 307

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S D I   P +T  Q+E  L+       D L+    +   GT            +  + +
Sbjct: 308 SADAIVGFPGETEAQFENTLKLVEDIGFDQLNTAAYSPRPGTPAALWENQLSEEVKCDRL 367

Query: 232 AVDLYNLTQSITSAHGLH 249
               + +          +
Sbjct: 368 QRLNHLVAVKAAERSQRY 385


>gi|217077946|ref|YP_002335664.1| radical SAM protein, family [Thermosipho africanus TCF52B]
 gi|217037801|gb|ACJ76323.1| radical SAM protein, family [Thermosipho africanus TCF52B]
          Length = 271

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 8/202 (3%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           I++ + +M+      G +   + +F   + +    + +  +             V+I+I 
Sbjct: 18  IKTQIKKMKERYTKKGAKKFIA-YFQNYSNTYAPIEMLKKVYLTALD----EDIVQISIS 72

Query: 112 ANPSSVEVNNF---QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
             P  +        +  R+     I +G+Q+    +L  + R H+ +E I A    +   
Sbjct: 73  TRPDCISDEILDLLEELREKIDVSIEMGLQTSNYHTLVKMNRGHSLAEYIYAAKKIKERN 132

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             +   +I   P   M       +      +D + ++ L + + T+  K+  +  + + +
Sbjct: 133 FEIISHVILNFPTDDMLDVIETAKILSVLDIDGVKIHSLYVVENTILGKLFNENKIQIGT 192

Query: 229 ENVAVDLYNLTQSITSAHGLHA 250
               ++         S      
Sbjct: 193 LESYIERVIRFLEFLSPKITIH 214


>gi|146337215|ref|YP_001202263.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bradyrhizobium
           sp. ORS278]
 gi|229890450|sp|A4YJD7|MIAB_BRASO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146190021|emb|CAL74013.1| Conserved hypothetical protein; putative MiaB-like tRNA modifying
           enzyme [Bradyrhizobium sp. ORS278]
          Length = 467

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 18/216 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + ++      +G R I+ I      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGAEMSRPVARIVDDV-MQLTDSGVREITLIGQNVNAYHGEGP- 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   + +   +     I     +P+ V+      +R     +  + L VQS
Sbjct: 221 ---DGRTWTLGRLLYRIAEIPGVARIRYSTSHPNDVDDGLIAAHRDLTAVMPFVHLPVQS 277

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H+A++    +   R     +  S D I   P +T   +   L      
Sbjct: 278 GSDRILAAMNRKHSAADYRRVVDRFRGARDDIAFSSDFIVGFPGETEEDFRATLALIDQI 337

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                  ++ +   GT    M +        E +  
Sbjct: 338 GYAAAYSFKYSPRPGTPAADMQEMVSATEMDERLER 373


>gi|17986416|ref|NP_539050.1| Fe-S oxidoreductase [Brucella melitensis bv. 1 str. 16M]
 gi|17982010|gb|AAL51314.1| fe-s oxidoreductase [Brucella melitensis bv. 1 str. 16M]
          Length = 447

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 79/205 (38%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    +      +  +++L G          +    +G   
Sbjct: 170 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 223

Query: 81  PSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
           PS +    +   +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 224 PSNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 278

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I     AR + P + F  D+I   P +T   ++  L+   
Sbjct: 279 QAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 338

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 339 ECGLTHLHVFPYSPREGTPAARMPQ 363


>gi|152976138|ref|YP_001375655.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|229890423|sp|A7GRA2|MIAB_BACCN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|152024890|gb|ABS22660.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cytotoxicus NVH
           391-98]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 77/207 (37%), Gaps = 20/207 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     ++ +R L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIKEVRHLAANGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +E   +  ++D + K   +         ++P   + +  +   K G  V  I L VQS
Sbjct: 275 DDLE-YGLGDLMDELRK---IDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R +   + +  +   +   P +    D+I   P +T  Q+E  L      
Sbjct: 331 GSTDMLKIMARKYTREQYLELVRKIKKTIPNVVLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             D    +  +  +GT   KM  +  +
Sbjct: 391 EFDSAFTFIYSPREGTPAAKMKDNIPM 417


>gi|90581601|ref|ZP_01237392.1| putative 2-methylthioadenine synthetase [Vibrio angustum S14]
 gi|90437184|gb|EAS62384.1| putative 2-methylthioadenine synthetase [Vibrio angustum S14]
          Length = 475

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 79/234 (33%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               +A   + +     +     I     +P     +    Y+     VN + L VQS  
Sbjct: 211 HDGEVASFAELLRLVAAIDGIDRIRYTTSHPIEFTDDIIDVYKDTPELVNYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R + P ++   D I A P +T   +E  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSKIRKLRKVRPDITMSSDFIVAFPGETDQDFEDTMKLIREIDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT       D    L  E     LY L Q + S    HA ++
Sbjct: 331 DISYSFIFSPRPGTPAA----DYPCDLSEEVKKERLYALQQQLNSQAMRHARQM 380


>gi|330445221|ref|ZP_08308873.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489412|dbj|GAA03370.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 79/235 (33%), Gaps = 20/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGV--- 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +    IA   + +     +     I     +P     +  + Y+     V+ + L VQS 
Sbjct: 210 MHDGEIASFAELLRLVAAIDGIDRIRYTTSHPIEFTDDIIEVYKDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P ++   D I A P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSKIRKLRQARPDITISSDFIVAFPGETDQDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D    +  +   GT       D    L  E     LY L Q I +    ++ ++
Sbjct: 330 FDMSFSFIFSARPGTPAA----DYPCDLTEEVKKERLYELQQQINTQAMRYSRQM 380


>gi|299535357|ref|ZP_07048679.1| hypothetical protein BFZC1_05023 [Lysinibacillus fusiformis ZC1]
 gi|298729118|gb|EFI69671.1| hypothetical protein BFZC1_05023 [Lysinibacillus fusiformis ZC1]
          Length = 318

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 15/234 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 41  CPNRDGTVAFGGCTFCS-AAGSGDFAGNKVDPIDVQFAEIRDKMHQKWKDGKYMAYFQAY 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +      + ++ +           V ++I   P  +  +  +   +        I LG
Sbjct: 100 TNT---HAPLPVLKEKFEAALAQEGVVGLSIATRPDCLPDDVVEYLAELNERTYLWIELG 156

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ E++   + R H+ +  +  +   R    R+   +I  LP +         +    
Sbjct: 157 LQTVHEKTANLINRAHDYATYVEGVEKLRKHGIRVCSHIINGLPLEDYDMMMETARAVAQ 216

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             V  + ++ L + KGT   K ++ G L    ++V   L      I     +  
Sbjct: 217 LDVQGIKIHLLHLLKGTPMVKQYEKGMLEFLDQDVYTKLVADQLEILPPEMVIH 270


>gi|225572114|ref|ZP_03780978.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040448|gb|EEG50694.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM
           10507]
          Length = 488

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 76/197 (38%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C   C YC    +VR  +  +E   ++ + E++ +    G R +  +         +L E
Sbjct: 207 CNNFCSYC-IVPYVRGRERSREP--KAIIREIEKLVA-DGVREVMLLGQNVNSYGKTLDE 262

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           P + A +L+ + +   +       + ++P  +     Q   K+      + L +QS   +
Sbjct: 263 PVSFARLLEEVEQVEGLERIRF--MTSHPKDLSDELIQVMAKSQKICRHLHLPLQSGSSR 320

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++    +  +   R   P +S   DLI   P +T + +E  L+       D 
Sbjct: 321 ILKEMNRRYDQERYLELVEKIRAAMPDISLTTDLIVGFPGETESDFEETLKVVDQVGYDT 380

Query: 202 LSLYQLTIEKGTLFYKM 218
              +  +   GT    M
Sbjct: 381 AFTFIYSKRSGTPAAAM 397


>gi|209963630|ref|YP_002296545.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodospirillum centenum SW]
 gi|209957096|gb|ACI97732.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodospirillum centenum SW]
          Length = 590

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 63/208 (30%), Gaps = 20/208 (9%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      R Y+V            +  +  L    
Sbjct: 186 YIYIPMGVRVAIPNMARGCPFTCSFCSQWKFWRNYRVRDPK------KVVDEIETLVRDH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++   + I    +   +   V   +   +       +      YR+AG
Sbjct: 240 KVGFFILADEEPTIHRKKFIQFCEEMERRKLPVLWGINTRVTDILR--DEELLPLYRRAG 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +    ++   AI L +          I  L  +T    E 
Sbjct: 298 LVHVSLGTEAAAQLKLDLFNKETTIAQNKKAIELLQKNGIVAEAQFIVGLENETAETLEQ 357

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             Q A+ +  D  +    T    +  ++
Sbjct: 358 TYQMAMDWGPDMANWAMYTPWPFSDLFR 385


>gi|255280937|ref|ZP_05345492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
           DSM 14469]
 gi|255268385|gb|EET61590.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
           DSM 14469]
          Length = 518

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ + +L     +  +  G    S    L
Sbjct: 237 CNNFCSYC-----IVPYVRGRERS-REPREILREIERLAADGVVEVMLLGQNVNSYGKNL 290

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            EP + A +L  + K   +       + ++P  +     +     +     + L +QS  
Sbjct: 291 PEPMSFAQLLREVEKIDGIKRIRF--MTSHPKDLSDELIEVMASSEKICRHMHLPLQSGS 348

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +A +   R   P +S   D+I   P +T   +E  L        
Sbjct: 349 SRILKIMNRRYTKEQYLALVEKLRRAIPDISLTTDIIVGFPGETEEDFEETLDVVRRARY 408

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 409 DSAFTFIYSKRTGTPAAAM 427


>gi|197303019|ref|ZP_03168067.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
           29176]
 gi|197297874|gb|EDY32426.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
           29176]
          Length = 440

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 75/222 (33%), Gaps = 15/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     + +    + N+    +  +    +    + +  +       +L    
Sbjct: 154 CDKHCTYC----IIPK---VRGNYRSVPMERLVNEARELAEQGVKELILVAQETTLYGKD 206

Query: 88  NIAL--ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 +   + +   +S    I I    P  +     Q  ++     + + L +Q   +
Sbjct: 207 LYGEKSLHKLVKELCNISGIRWIRILYCYPEEITDELIQVMKEEPKVCHYLDLPIQHAND 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR     E +  +   R+  P +     LI   P +T  Q E  +Q       D
Sbjct: 267 TILKRMGRRTTKQELVHIVEKLRSEIPDICLRTTLITGFPGETAEQHEELMQFVDEMEFD 326

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L ++  + E+ T    M +  +     E+   ++  L Q I
Sbjct: 327 RLGVFTYSPEEDTPAAGMPEQIE-EEVKEDRQAEIMELQQEI 367


>gi|91792176|ref|YP_561827.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella denitrificans
           OS217]
 gi|123357083|sp|Q12R22|MIAB_SHEDO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91714178|gb|ABE54104.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella denitrificans
           OS217]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F                  + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPQDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +    ++     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 DQICTFAELLRLVASIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R      ++S D I   P ++   +   ++     A DH
Sbjct: 273 ILTQMKRGHMAIEYKSIIRRLRKAREGIQISSDFIIGFPGESAEDFADTMKLIEDVAFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D       + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVSDEEKKQRLAILQDRITQQAMRY 376


>gi|291539755|emb|CBL12866.1| radical SAM protein, TIGR01212 family [Roseburia intestinalis
           XB6B4]
          Length = 306

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 70/236 (29%), Gaps = 19/236 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFG 77
           C  +        C +C   S            +      +   +++           +F 
Sbjct: 35  CPNRDGTLGNHGCIFC---SAGGSGDFAAAPDLSVHAQILSAKKRIQAKTGCKKFIAYFQ 91

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---IS 134
             T +    + +  I     +   V   V ++I      +  +      +    +   I 
Sbjct: 92  AYTNTYAPVEYLRRIFTEAIEEPDV---VALSIATRCDCLPPDVLDLLDELNRRKPVWIE 148

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           LG+Q++ +++L  +      S+   A+         +   LI  LP +T       ++  
Sbjct: 149 LGLQTIHDKTLHAIRSGFTLSQFEQAVSDLHKRNIPVITHLILGLPGETKEDMLSSVRYV 208

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            S  V  + L  L I KGT     +      L +     DL     ++     +  
Sbjct: 209 GSLPVTGIKLQLLHILKGTDLGTAYMADPFPLFTLEEYCDLIADCIALLPPEIVIH 264


>gi|291279773|ref|YP_003496608.1| tRNA-i(6)A37 thiotransferase enzyme [Deferribacter desulfuricans
           SSM1]
 gi|290754475|dbj|BAI80852.1| tRNA-i(6)A37 thiotransferase enzyme [Deferribacter desulfuricans
           SSM1]
          Length = 439

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 19/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +  ++ L           G    S    +
Sbjct: 152 CDNFCSYC-----IVPYVRGREKS-RKPSEILDEIKYLVNNGVKEVTLLGQNVNSYGKGL 205

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +   N   +L  +     +     +T  ++P   +       R        + L +Q+  
Sbjct: 206 DEDINFPKLLYKVHDINGLERIRFVT--SHPKDFDDELIFAIRDLPKVCEYLHLPLQAGS 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   E    +  A+ + P +  S D I   P +T+  +   L+       
Sbjct: 264 NKVLKMMNRKYTYEEYRDKVLKAKEMIPDLALSSDFIVGFPGETVEDFAETLKAIKEIRY 323

Query: 200 DHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           + +  ++ +    T    F     D +       +      +T+ I  ++     EI
Sbjct: 324 ESIFAFKYSPRPKTKASNFVDDITDDEKSRRLNELLSIQSKITEEINKSYVGKVQEI 380


>gi|256784788|ref|ZP_05523219.1| hypothetical protein SlivT_09878 [Streptomyces lividans TK24]
 gi|289768676|ref|ZP_06528054.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces lividans
           TK24]
 gi|289698875|gb|EFD66304.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces lividans
           TK24]
          Length = 505

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNINGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      ++ D+I
Sbjct: 258 VIAAMAETPNAMPQLHMPLQSGSDPVLKAMRRSYRQERYLGIIEKVRAAIPHAAITTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 318 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 359


>gi|146277061|ref|YP_001167220.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555302|gb|ABP69915.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides ATCC 17025]
          Length = 600

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L    ++ 
Sbjct: 189 EPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEKLVNEHNVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
                   P++   + I            +   V+  I    + +  +    + YRKAG+
Sbjct: 243 FFILADEEPTINRKKFIE--FCEEMIARGLPDKVKWGINTRVTDIKRDKEQLKFYRKAGL 300

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             ISLG ++  +  L    +    +E   AI L R          I  L  +T    E  
Sbjct: 301 VHISLGTEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQFIVGLENETKETLEET 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            Q    +  D  +    T    T  ++
Sbjct: 361 FQMVWDWQPDLANWAMYTPWPFTPLFQ 387


>gi|119510198|ref|ZP_01629336.1| tRNA-i(6)A37 modification enzyme MiaB [Nodularia spumigena CCY9414]
 gi|119465148|gb|EAW46047.1| tRNA-i(6)A37 modification enzyme MiaB [Nodularia spumigena CCY9414]
          Length = 454

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 16/219 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           E+    +  +S+  +V+  + C ++C YC          V Q    ++   EM+ + +  
Sbjct: 136 EDITQPRRDSSVTAWVNIIYGCNERCTYC---VVPNVRGVEQSRTPEAIRAEMEELGRQ- 191

Query: 67  GPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
           G + I+ +      +G   P +  E +++    D +     +     +     +P     
Sbjct: 192 GYKEITLLGQNIDAYGRDLPGTTPEGRHLHNFTDLLYYVHDIPGIERLRFATSHPRYFTE 251

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDL 175
              +   +         +  QS + + L+ + R +   +    I   R   P   +S D 
Sbjct: 252 RLIKACAELPKVCEHFHIPFQSGDNELLKAMSRGYTHEKYRRIIDTIRRYMPDASISGDA 311

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           I   P +T  Q+E  L+       D L+    +   GT 
Sbjct: 312 IVGFPGETEAQFENTLKLVEDIGFDLLNTAAYSPRPGTP 350


>gi|311898737|dbj|BAJ31145.1| putative isopentenyl-adenosine A37 tRNA methylthiolase
           [Kitasatospora setae KM-6054]
          Length = 496

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 73/225 (32%), Gaps = 13/225 (5%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFI--QSFLT 57
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +E+         
Sbjct: 131 LESLETFPSTLPARRESAYAAWVAISVGCNNTCTFC----IVPALRGKEEDRRPGDILAE 186

Query: 58  EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
               + +     ++           L + +    +L    +   +          +P   
Sbjct: 187 VEALVAEGVVEVTLLGQNVNAYGSDLGDREAFGKLLRACGQVEGLERVRF--TSPHPRDF 244

Query: 118 EVNNFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSF 173
             +      +    ++++ + +QS  ++ L+ + R++     +  I    A      +S 
Sbjct: 245 TDDVIAAMAETPNAMHQLHMPLQSGSDRILKAMRRSYRQERFLGIIEKVRAAMPDAAIST 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           D+I   P ++   +E  L         +   +Q +   GT   +M
Sbjct: 305 DIIVGFPGESDEDFEQTLHVVREARFANAFTFQYSKRPGTPAAEM 349


>gi|222100720|ref|YP_002535288.1| MiaB-like tRNA modifying enzyme [Thermotoga neapolitana DSM 4359]
 gi|221573110|gb|ACM23922.1| MiaB-like tRNA modifying enzyme [Thermotoga neapolitana DSM 4359]
          Length = 434

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC   F    +      E F + F    ++  +++     I+ +  G       
Sbjct: 147 CDNGCTYCAIRFARGTKVRSKPLELFKEEFEKMVIKGYKEIV----ITGVNLGKYG---- 198

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                  ++D +     V  +  + + + N   +     + +R        + + VQS  
Sbjct: 199 -KDIGTTLVDLLKIVEHVPGDYRVRLSSLNVEDITDELVEVFRDNPRLCPHLHISVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ +GR +++S+ +  +   R+I P  S   D+I   P +T   +   ++       
Sbjct: 258 DRVLKRMGRRYSSSDFLKVVEKLRSINPDFSITTDIIVGFPGETDEDFLKTVKLLEEVEF 317

Query: 200 DHLSLYQLTIEKGTL 214
             + +++ +   GT 
Sbjct: 318 SRVHIFRYSPRPGTP 332


>gi|167040247|ref|YP_001663232.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Thermoanaerobacter sp. X514]
 gi|256750831|ref|ZP_05491716.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914331|ref|ZP_07131647.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X561]
 gi|307724433|ref|YP_003904184.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X513]
 gi|229891016|sp|B0K1A1|MIAB_THEPX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|166854487|gb|ABY92896.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X514]
 gi|256750414|gb|EEU63433.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889266|gb|EFK84412.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X561]
 gi|307581494|gb|ADN54893.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X513]
          Length = 471

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
             +  +  ++L  +V+  + C   C YC     +  Y  G+E   +     +  +++L  
Sbjct: 166 EELPVKRDSNLKAWVNIIYGCNNFCTYC-----IVPYTRGREKS-RKPEDIIAEVKELAQ 219

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQ 123
                    G    S    +++   +      + ++    I     + ++P  +      
Sbjct: 220 KGYKEITLLGQNVNSY--GKDLDEDITFAKLLYKLNDIEGIERIRFMTSHPKDISDELIY 277

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             R        + L VQ+   + L+ + R +     +  I   R+  P ++   D+I   
Sbjct: 278 AMRDLDKVCEHLHLPVQAGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGF 337

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           P +T   +   L        D    +  +   GT+   M    D  +  E +  
Sbjct: 338 PGETEEDFLETLDLVERVRFDAAYTFIYSKRAGTVAANMPDQVDDAVKHERLER 391


>gi|86356033|ref|YP_467925.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli CFN 42]
 gi|123724853|sp|Q2KD88|MIAB_RHIEC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|86280135|gb|ABC89198.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli CFN 42]
          Length = 469

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLVE-GGVREITLLGQNVNAWHGAGPR 238

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++      +R     +  + L VQS 
Sbjct: 239 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIAAHRDLRALMPYLHLPVQSG 295

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E ++ I   R + P ++   D I   P +T   +E  L+      
Sbjct: 296 SDRILKAMNRRHTAAEYLSLIERIRAVRPDIALSGDFITGFPGETDKDFEDTLRLVEEVR 355

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 356 YAQAFSFKYSTRPGTP 371


>gi|325473662|gb|EGC76851.1| MiaB-like tRNA modifying enzyme [Treponema denticola F0402]
          Length = 468

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-------GGGT 80
           C   C YC     + R         ++    +Q  +       +S +          GG 
Sbjct: 192 CNNACAYC--RIRLARGTSVSLPAEEAVRRIVQIEKNGAAEVVLSGVNLSQYRDETYGGF 249

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQS 139
            +L+     A +L+   K     S         P  V+    +      +     L +QS
Sbjct: 250 ANLL-----AKLLENTKKIRLRIS------SMYPECVDDGILEIVANKRICPHFHLSIQS 298

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R +  ++   AI+  R       +  D+I   P +T   +    +     
Sbjct: 299 GSDKILKAMNRPYREADIRRAINNLRKAKDNPFIGCDIITGFPSETEDDFLQTFKMCEEL 358

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            +  + ++  +   GT  + M  
Sbjct: 359 KIPGIHVFPFSARPGTRAFSMRP 381


>gi|206977875|ref|ZP_03238763.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus H3081.97]
 gi|217961193|ref|YP_002339761.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH187]
 gi|222097218|ref|YP_002531275.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           cereus Q1]
 gi|229140413|ref|ZP_04268968.1| hypothetical protein bcere0013_35120 [Bacillus cereus BDRD-ST26]
 gi|229197883|ref|ZP_04324599.1| hypothetical protein bcere0001_34190 [Bacillus cereus m1293]
 gi|229890422|sp|B7HLA6|MIAB_BACC7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206743875|gb|EDZ55294.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus H3081.97]
 gi|217064945|gb|ACJ79195.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH187]
 gi|221241276|gb|ACM13986.1| conserved hypothetical protein [Bacillus cereus Q1]
 gi|228585601|gb|EEK43703.1| hypothetical protein bcere0001_34190 [Bacillus cereus m1293]
 gi|228642974|gb|EEK99250.1| hypothetical protein bcere0013_35120 [Bacillus cereus BDRD-ST26]
 gi|324327666|gb|ADY22926.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 82/232 (35%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +    + Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNNRY 442


>gi|114800325|ref|YP_762198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
           15444]
 gi|114740499|gb|ABI78624.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
           15444]
          Length = 425

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 24/234 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + +    +  +R L        +  G    S    +
Sbjct: 151 CDHRCTFC-----IIPYGRGNSRSVPA-GEVVAQVRALAASGHYEVVLTGVDLTSWGADL 204

Query: 85  E--PQN---IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQ 138
              P+    +  IL  + +   +  +    IE     ++    +      V   + L +Q
Sbjct: 205 PGTPELGNLVQRILKLVPELRALRISSIDAIE-----MDDALIEALADPRVAPYLHLSLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
             +   L+ + R H+  +AI      R + P +    D+I   P +T   +E  L+    
Sbjct: 260 HGDNLILKRMKRRHSRDQAIQLTERLRAMRPDIALGADIIAGFPTETEAHFENSLRLIDE 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  L  +  +   GT   KM +    ++  ++ A  L    ++    H    
Sbjct: 320 CGLSFLHAFPYSPRPGTPAAKMPQLAKPLI--KDRAARLRAAGEAALLRHFERH 371


>gi|114778653|ref|ZP_01453469.1| 2-methylthioadenine synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551118|gb|EAU53679.1| 2-methylthioadenine synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 452

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPS 82
           C K C +C       R                Q +    G   IS +      + G  P 
Sbjct: 166 CDKFCTFC--VVPYTRGPELSRPVADILSECRQLLAD--GVVEISLLGQNVNGYRGVGPD 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  +  ++L  +AK   +      T  ++P  +     Q + +    +  + L VQS 
Sbjct: 222 D-EEWDFTMLLYAVAKLDGLKRLRFTT--SHPMEMTSELCQAFAEIPQLMPYLHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H+    +  I   R   P +  S D I   P ++   +E  L  A    
Sbjct: 279 SDAMLKAMHRGHDRDTYLRQIEELREYCPDIALSSDFIVGYPGESDADFEDTLDLARRVG 338

Query: 199 VDHLSLYQLTIEKGTL 214
            D    ++ +   GT 
Sbjct: 339 YDSAYCFKYSPRPGTP 354


>gi|321312585|ref|YP_004204872.1| putative Fe-S oxidoreductase [Bacillus subtilis BSn5]
 gi|320018859|gb|ADV93845.1| putative Fe-S oxidoreductase [Bacillus subtilis BSn5]
          Length = 322

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 70/205 (34%), Gaps = 13/205 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLITQFHDIKNRMHEKWKDGKYIAYFQAFTNTHAPVEV 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + +     +   V I+I   P  +  +      +        + LG+Q++ E++ 
Sbjct: 110 LREKFESV---LALDDVVGISIATRPDCLPDDVVDYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+ +  +  ++  R    R+   +I  LP +         +      V  + ++
Sbjct: 167 LLINRAHDFNCYVEGVNKLRKHGIRVCSHIINGLPLEDRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSEN 230
            L + KGT   K ++ G L   S++
Sbjct: 227 LLHLLKGTPMVKQYEKGQLEFLSQD 251


>gi|297202829|ref|ZP_06920226.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sviceus ATCC
           29083]
 gi|297148220|gb|EFH28901.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sviceus ATCC
           29083]
          Length = 508

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 145 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 202

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 203 LVGEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGSIEGLERVRF--TSPHPRDFTDD 260

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
             +   +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 261 VIEAMAETPNVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAMPDAAISTDII 320

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +         +   +Q +   GT    M
Sbjct: 321 VGFPGETEEDFEQTMHVVRQARFTNAFTFQYSKRPGTPAATM 362


>gi|126178341|ref|YP_001046306.1| radical SAM domain-containing protein [Methanoculleus marisnigri
           JR1]
 gi|125861135|gb|ABN56324.1| Radical SAM domain protein [Methanoculleus marisnigri JR1]
          Length = 435

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 30/230 (13%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPFCVKK------CPYCDFNSHVRRY--KVGQENFIQSF 55
           L    +++  Q       Y+              C +C     V R+  +  +   +   
Sbjct: 141 LPLIPDDIGNQSVRGASAYI-----ETHRGCIGGCTFC----QVPRFFGRAIRSRPLDRI 191

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSL-------IEPQNIALILDGIAKNWTVSSNVEI 108
           + E++        R    +   GGT SL       + P+    +L  +A+          
Sbjct: 192 VEEVKAFSAHGATR----LSVSGGTGSLYGSTGGEMNPEAFIGLLRSMAEVMG--PKNVS 245

Query: 109 TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
           + +     +        R+  +  +  G++S  ++ LR +G+     +   A+   R   
Sbjct: 246 SPDIRVDCISDEILGAVRQYTIGWVFFGIESGSDRVLRLMGKGATVRQVEEAVERCREHG 305

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            R++   I   P +T   +E       + ++D + +        T    +
Sbjct: 306 LRVAGSFIVGYPGETERDYEATKDLIAALSLDDVFVSSAEPIPATPLADL 355


>gi|304395674|ref|ZP_07377557.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pantoea sp. aB]
 gi|304356968|gb|EFM21332.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pantoea sp. aB]
          Length = 461

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 61/197 (30%), Gaps = 8/197 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +          L   Q   Q     ++          +  + +
Sbjct: 144 CNKYCTFC--VVPYTRGEEVSRPSDDILLEIAQLAAQGVREVNLLGQNVNAYRGATFDGE 201

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I    + +     +     I     +P     +  + YR     V+ + L VQS  ++ 
Sbjct: 202 -ICTFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRI 260

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E  A I    A      +S D I   P +T   +E  ++       D  
Sbjct: 261 LTLMKRAHTALEYKAIIRKLRAARPDIEISSDFIIGFPGETQQDFEQTMKLIAEINFDVS 320

Query: 203 SLYQLTIEKGTLFYKMH 219
             +  +   GT    + 
Sbjct: 321 FSFVYSARPGTPAADLP 337


>gi|75674213|ref|YP_316634.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter winogradskyi
           Nb-255]
 gi|123745611|sp|Q3SMT7|MIAB_NITWN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|74419083|gb|ABA03282.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrobacter winogradskyi
           Nb-255]
          Length = 477

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 68/215 (31%), Gaps = 19/215 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C                +   + +++ +    G R I+ I
Sbjct: 157 SRGISAFVTVQEGCDKFCTFC---VVPYTRGAEASRPVAKVVEDVRRLAD-NGVREITLI 212

Query: 75  -----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA 128
                 + G  P    P     +L    +   +   V +     +P  VE      +R  
Sbjct: 213 GQNVNAYHGEGPDG-RPWPFGKLL---YRLAGIPGIVRLRYSTSHPRDVEDTLIDAHRDL 268

Query: 129 G--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTM 184
              +  + L VQS  ++ L  + R H A +    I   R   P +  S D I   P +T 
Sbjct: 269 DALMPFVHLPVQSGSDRILAAMNRRHTADDYRRVIDRFRQARPDIAFSSDFIVGFPGETE 328

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             +   L             ++ +   GT    M 
Sbjct: 329 EDFAATLALVGQIGYAAAYSFKYSPRPGTPAADMQ 363


>gi|314933912|ref|ZP_07841277.1| radical SAM protein, family [Staphylococcus caprae C87]
 gi|313654062|gb|EFS17819.1| radical SAM protein, family [Staphylococcus caprae C87]
          Length = 317

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKEEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQTTSDLINRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S+ 
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQE 249


>gi|311695357|gb|ADP98230.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine bacterium HP15]
          Length = 448

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 88/244 (36%), Gaps = 15/244 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+   G++    +V     C K   YC F                  + E+  +    G
Sbjct: 139 DNLPEPGADGPSAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPADDVIAEVAHLASQ-G 194

Query: 68  PRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            R +     ++    G     +  ++A +++ IA    +      T  ++P         
Sbjct: 195 VREVNLLGQNVNAYRGETHDGDTMDLAELIELIATIDGIDRIRYTT--SHPVEFSDALID 252

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
            Y +    V+ + L VQS  ++ L  + R H A E  + +   R I P +SF  D I   
Sbjct: 253 VYERVPELVSHLHLPVQSGSDRILAAMKRGHTALEYKSKLRRLRKIRPDISFSSDFIIGF 312

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T   +E  ++       D    +  +   GT    +  D  + +  + +++    L 
Sbjct: 313 PGETEKDFEDTMKLINDIGFDMSFSFVYSARPGTPASDLPDDTPMDIKKQRLSILQDRLN 372

Query: 240 QSIT 243
           Q++ 
Sbjct: 373 QNVM 376


>gi|167462198|ref|ZP_02327287.1| RNA modification enzyme, MiaB family protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 449

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + +   +        + +    GG    +E  
Sbjct: 153 CNNFCTFC---IIPWSRGLMRSRDPKSVVQQAHMLVDAGYKEIVLTGIHTGGYGEDMEDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++A +L  + K   +      +IEA+   +     +    +      + + +Q+ +++ L
Sbjct: 210 SLAKLLWDLDKVDGLERIRISSIEAS--QITDEVLEVLNASDKMCRHLHIPLQAGDDRVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    I L     P ++   D+I   P +T   +E   +         + 
Sbjct: 268 KRMRRKYTTEEYGRKIELIHKAMPGVAITTDVIVGFPGETEEMFENSYRFMEQMKYSEMH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSKRTGTPAARMEDQID 347


>gi|126651274|ref|ZP_01723481.1| YtqA [Bacillus sp. B14905]
 gi|126591803|gb|EAZ85886.1| YtqA [Bacillus sp. B14905]
          Length = 318

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 77/234 (32%), Gaps = 15/234 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I+    E++              +F   
Sbjct: 41  CPNRDGTVAFGGCTFCS-AAGSGDFAGNKVDPIEVQFAEIRDKMHQKWKDGKYMAYFQAY 99

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +      + ++ +           + ++I   P  +  +  +   +        I LG
Sbjct: 100 TNT---HAPLPVLKEKFEAALAQEGVIGLSIATRPDCLPDDVVEYLAELNERTYLWIELG 156

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ E++   + R H+ +  +  +   R    R+   +I  LP +         +    
Sbjct: 157 LQTVHEKTANLINRAHDYATYVEGVEKLRKHGIRVCSHIINGLPLEDYDMMMETARAVAK 216

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             V  + ++ L + KGT   K ++ G L    ++V   L      I     +  
Sbjct: 217 LDVQGIKIHLLHLLKGTPMVKQYEKGMLEFLDQDVYTKLVADQLEILPPDMVIH 270


>gi|115525930|ref|YP_782841.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisA53]
 gi|115519877|gb|ABJ07861.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisA53]
          Length = 560

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 81/235 (34%), Gaps = 19/235 (8%)

Query: 25  WP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P     C   C +C       ++K  ++  ++     +  + +L     +         
Sbjct: 201 IPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEELVEKYQVGFFILADEE 254

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P++   + I    + IA+   ++  V+  I    + +  +    + Y +AG+  +SLG +
Sbjct: 255 PTINRKKFIQFCEELIAR--GLNKKVQWGINTRVTDILRDEALLKFYNEAGLMHVSLGTE 312

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +  L    +    S+   AI L R     +    I  L  +T    E   + A+ + 
Sbjct: 313 AAAQLKLDLFNKETKISDNKKAIRLLREAGIVVEAQFIVGLDSETPETLEETYRMAMDWK 372

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D  +    T    T  +K     +L    E    D YN    I     +   E+
Sbjct: 373 PDLANWSMYTPWPFTPLFK-----ELSDKVEVFDFDKYNFVTPILKPAAMERAEL 422


>gi|254994852|ref|ZP_05277042.1| hypothetical protein AmarM_01756 [Anaplasma marginale str.
           Mississippi]
          Length = 463

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C     V  Y  G E + +S    +  +R+L    +   +
Sbjct: 142 SRGVSAFVSVQEGCDKFCTFC-----VVPYTRGPE-YSRSVEDVLAEVRKLADGGTKEVV 195

Query: 75  FFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             G    +          ++  ++  +A+   +      T  ++P  +  + +  ++   
Sbjct: 196 LLGQNVNAYHGTYKGNEWDLGRLIRKVAEVEGIERIRYTT--SHPRDMHSSLYDAHKHEP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
             +  + L VQS  +  LR + R H+  E +  I   +     +  S D I   P +T  
Sbjct: 254 KLLPCVHLPVQSGSDSVLRKMNRKHSVQEYMDIIDTLKEARSDIALSSDFIVGFPGETEE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +E  +             ++ +   GT 
Sbjct: 314 DFEATMDLVRHVGFATSYSFKYSPRPGTP 342


>gi|242075846|ref|XP_002447859.1| hypothetical protein SORBIDRAFT_06g017040 [Sorghum bicolor]
 gi|241939042|gb|EES12187.1| hypothetical protein SORBIDRAFT_06g017040 [Sorghum bicolor]
          Length = 623

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ +    T +    +     S  +  +G    +   
Sbjct: 198 CLGACTYCK-TKHARGHLGSYTIDSLVDRVKTVVSEGVREIWLSSEDTGAYGRDIST--- 253

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGVQSL 140
             N+  +L+ I     V  +  + I        + + +            + + + VQS 
Sbjct: 254 --NLPNLLNAIVAELPVDQSTMLRIGMTNPPFILEHLKEIAAVLCHPCVYSFLHVPVQSG 311

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  +E    +     +    +++ D+I   P +T   +   +     Y 
Sbjct: 312 SDAVLTAMNREYTVAEFRKVVDTLYELVPGMQIATDIICGFPGETDEDFSETVNLVKEYQ 371

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + + Q     GT   +M
Sbjct: 372 FPQVHISQFYPRPGTPAARM 391


>gi|167561620|ref|ZP_02354536.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
           EO147]
 gi|167568856|ref|ZP_02361730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
           C6786]
          Length = 457

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   LTE+  +    G R ++ +      + G   +
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GASDIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
           + D    +  +   GT    +
Sbjct: 331 SYDTSFSFIYSPRPGTPAANL 351


>gi|116329358|ref|YP_799078.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116330041|ref|YP_799759.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116122102|gb|ABJ80145.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116123730|gb|ABJ75001.1| Fe-S oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 567

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    H       + N + + L+E++   +L          F     +   P+
Sbjct: 239 CPHRCSFCS--VHTTFGTKYRRNTVANVLSEIKESYELGY----RVFDFEDDNLTFFRPE 292

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  + + + + +       + +      S++    +  R AG   ++L + S ++    
Sbjct: 293 -MTKLCEELIRAFPKKDVRFVAMNGISYISLDSELLRLMRDAGFTNLNLALVSSDKLVRE 351

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
              R H   + +  +  +  +  +++   I  LP +T+      L+
Sbjct: 352 TTKRPHTIEKYLQVVRESFELGFQITSYQILGLPMETLESMIQTLR 397


>gi|56416641|ref|YP_153715.1| hypothetical protein AM401 [Anaplasma marginale str. St. Maries]
 gi|81599177|sp|Q5PB69|MIAB_ANAMM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56387873|gb|AAV86460.1| hypothetical protein AM401 [Anaplasma marginale str. St. Maries]
          Length = 455

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C     V  Y  G E + +S    +  +R+L    +   +
Sbjct: 142 SRGVSAFVSVQEGCDKFCTFC-----VVPYTRGPE-YSRSVEDVLAEVRKLADGGTKEVV 195

Query: 75  FFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             G    +          ++  ++  +A+   +      T  ++P  +  + +  ++   
Sbjct: 196 LLGQNVNAYHGTYKGNEWDLGRLIRKVAEVEGIERIRYTT--SHPRDMHSSLYDAHKHEP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
             +  + L VQS  +  LR + R H+  E +  I   +     +  S D I   P +T  
Sbjct: 254 KLLPCVHLPVQSGSDSVLRKMNRKHSVQEYMDIIDTLKEARSDIALSSDFIVGFPGETEE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +E  +             ++ +   GT 
Sbjct: 314 DFEATMDLVRHVGFATSYSFKYSPRPGTP 342


>gi|159184272|ref|NP_353388.2| miaB protein [Agrobacterium tumefaciens str. C58]
 gi|229890693|sp|Q7D1M2|MIAB_AGRT5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|159139599|gb|AAK86173.2| miaB protein [Agrobacterium tumefaciens str. C58]
          Length = 455

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 22/199 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C          S   R  V +    + + + E+  + Q           + G 
Sbjct: 171 CDKFCTFCVVPYTRGSEVSRPVRQIVDEAMKLVDAGVREITLLGQNVN-------AWQGE 223

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGV 137
            P   E   +A +L  +A+   ++     T  ++P  ++      +R   +    + L V
Sbjct: 224 GPKG-EKWGLAELLYRLAEIPGLARLRYTT--SHPRDMDDRLIGAHRDLRILMPYLHLPV 280

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R H   E I  I   R+  P ++   D I   P +T   +E  +    
Sbjct: 281 QSGSDRILKAMNRRHTGEEYIQLIEKIRSARPDIAMSGDFIVGFPGETDRDFEDTMAMVE 340

Query: 196 SYAVDHLSLYQLTIEKGTL 214
           +        ++ +   GT 
Sbjct: 341 TVKYAQAFSFKYSTRPGTP 359


>gi|313157725|gb|EFR57136.1| tRNA methylthiotransferase YqeV [Alistipes sp. HGB5]
          Length = 432

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 60/196 (30%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   +        +   I   + E + +    G + I       G       +
Sbjct: 153 CDYKCAYC---TIHYARGGSRNMPIADLVAEARQIAA-AGQKEIVITGINTGDFGRTTGE 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               +L  + +   +      +IE  P+ +          +    +   + +QS  ++ L
Sbjct: 209 RFIDLLRALNEVEGIERYRISSIE--PNLLTDEIIAFCAASPKFQHHFHIPLQSGSDKIL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R +  +     I   R + P   +  D+I   P +T   +              L 
Sbjct: 267 GLMRRRYTTARFADRIAAVRALMPDAFIGIDVIVGFPGETEEDFRTTYDFLEGLKPAFLH 326

Query: 204 LYQLTIEKGTLFYKMH 219
           ++  +   GT    M 
Sbjct: 327 IFPFSERPGTPAVDMP 342


>gi|212636644|ref|YP_002313169.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           piezotolerans WP3]
 gi|212558128|gb|ACJ30582.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella piezotolerans
           WP3]
          Length = 462

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 75/252 (29%), Gaps = 18/252 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       YV     C K   YC F              +   + E+  +
Sbjct: 120 IEKFDRLPEPRADGP-SAYVSIMEGCSK---YCSFCVVPYTRGEEVSRPLDDIILEIAQL 175

Query: 63  RQLTGPRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
               G R +     ++    G         I    + +     +     +     +P   
Sbjct: 176 ADQ-GVREVNLLGQNVNAYRGAT---HDDEICTFAELLRYVAAIDGIDRLRFTTSHPIEF 231

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SF 173
             +    Y      V+ + L VQS  +  L  + R H A E  + I   R   P +  S 
Sbjct: 232 TQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRLRKARPDIQISS 291

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P ++   +   ++       DH   +  +   GT    +  D  L    E +A+
Sbjct: 292 DFIIGFPGESKQDFADTMKLIEDVQFDHSFSFIYSARPGTPAADLPDDVTLEEKKERLAI 351

Query: 234 DLYNLTQSITSA 245
               +TQ     
Sbjct: 352 LQDRITQQAMRY 363


>gi|209542258|ref|YP_002274487.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529935|gb|ACI49872.1| RNA modification enzyme, MiaB family [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 469

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + S L E + M +  G R I+ +      + G  P 
Sbjct: 181 CDKFCSFC---VVPYTRGAEASRPVASVLREARRMVE-CGAREITLLGQNVNAYHGEGP- 235

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +  +         +     I     +P  ++ +    +R     +  + L VQS
Sbjct: 236 ---DGRVWGLARLAEALAAIPGLARIRYTTSHPRDMDADLIAAHRDLPALMPFLHLPVQS 292

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A++    +   R+  P +  S D I   P +T   +E  LQ     
Sbjct: 293 GSDRILDAMNRGHTAADYRDLVLRLRDARPDIALSSDFIVGHPGETDADFEATLQLIRDV 352

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 353 GFAQAFSFKYSPRPGTP 369


>gi|196034172|ref|ZP_03101582.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus W]
 gi|196044479|ref|ZP_03111714.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB108]
 gi|218904900|ref|YP_002452734.1| hypothetical protein BCAH820_3784 [Bacillus cereus AH820]
 gi|228916410|ref|ZP_04079977.1| hypothetical protein bthur0012_36250 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228928822|ref|ZP_04091854.1| hypothetical protein bthur0010_35140 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228935069|ref|ZP_04097899.1| hypothetical protein bthur0009_35230 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228947493|ref|ZP_04109783.1| hypothetical protein bthur0007_36210 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229123286|ref|ZP_04252490.1| hypothetical protein bcere0016_35750 [Bacillus cereus 95/8201]
 gi|229186011|ref|ZP_04313181.1| hypothetical protein bcere0004_35580 [Bacillus cereus BGSC 6E1]
 gi|301055262|ref|YP_003793473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis CI]
 gi|229890419|sp|B7JJ50|MIAB_BACC0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890697|sp|A0RHE4|MIAB_BACAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|195993246|gb|EDX57204.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus W]
 gi|196024514|gb|EDX63186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB108]
 gi|218534759|gb|ACK87157.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|228597430|gb|EEK55080.1| hypothetical protein bcere0004_35580 [Bacillus cereus BGSC 6E1]
 gi|228660062|gb|EEL15698.1| hypothetical protein bcere0016_35750 [Bacillus cereus 95/8201]
 gi|228812013|gb|EEM58344.1| hypothetical protein bthur0007_36210 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228824639|gb|EEM70441.1| hypothetical protein bthur0009_35230 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228830629|gb|EEM76234.1| hypothetical protein bthur0010_35140 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228843213|gb|EEM88294.1| hypothetical protein bthur0012_36250 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|300377431|gb|ADK06335.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus biovar
           anthracis str. CI]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 442


>gi|162147627|ref|YP_001602088.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|229890548|sp|A9HIM2|MIAB_GLUDA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|161786204|emb|CAP55786.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 480

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                + S L E + M +  G R I+ +      + G  P 
Sbjct: 192 CDKFCSFC---VVPYTRGAEASRPVASVLREARRMVE-CGAREITLLGQNVNAYHGEGP- 246

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +  +         +     I     +P  ++ +    +R     +  + L VQS
Sbjct: 247 ---DGRVWGLARLAEALAAIPGLARIRYTTSHPRDMDADLIAAHRDLPALMPFLHLPVQS 303

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A++    +   R+  P +  S D I   P +T   +E  LQ     
Sbjct: 304 GSDRILDAMNRGHTAADYRDLVLRLRDARPDIALSSDFIVGHPGETDADFEATLQLIRDV 363

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 364 GFAQAFSFKYSPRPGTP 380


>gi|295135976|ref|YP_003586652.1| tRNA-i(6)A37 modification enzyme MiaB [Zunongwangia profunda
           SM-A87]
 gi|294983991|gb|ADF54456.1| tRNA-i(6)A37 modification enzyme MiaB [Zunongwangia profunda
           SM-A87]
          Length = 481

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 4/134 (2%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + ++  +         N I L VQS  ++ L+ + R H   E    I   + + P
Sbjct: 273 SNPQDMTLDVIEVMAAHRNICNYIHLPVQSGSDKMLKKMNRLHTREEYFTLIDNIKKLIP 332

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +S D+I   P +T    +  L        D   ++  +   GT+  +  +D      
Sbjct: 333 DCGISHDIITGFPTETEEDHKDTLSLMQYVKYDFGFMFAYSERPGTMAARKFEDDVPEET 392

Query: 228 SENVAVDLYNLTQS 241
            +    ++ NL Q 
Sbjct: 393 KKRRLTEIVNLQQE 406


>gi|223043527|ref|ZP_03613572.1| radical SAM protein, family [Staphylococcus capitis SK14]
 gi|222443015|gb|EEE49115.1| radical SAM protein, family [Staphylococcus capitis SK14]
          Length = 317

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKEEGV---VGLSIATRPDCLPDDVVEYLAELNERTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQTTSDLINRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S+ 
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQE 249


>gi|210623865|ref|ZP_03294100.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
 gi|210153291|gb|EEA84297.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
          Length = 432

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 67/210 (31%), Gaps = 9/210 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   + + + E++ +        + +          I+ +
Sbjct: 152 CDRFCTYC---IIPYARGRVRSRDLDNIVEEVKLLASKGYKEVVLTGIHVASYGKDIKDK 208

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +  +LD I     +     I      P        +   K         L +QS  + +
Sbjct: 209 EV-KLLDVIKAVNEIDGIERIRTSSVEPILFTDEFVEEISKMNKVCPHFHLSLQSGCDAT 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E    +   R   P ++   D+I   P +T  +++   +      +  +
Sbjct: 268 LDRMNRRYTTKEYKEIVDRLREKMPDVAITTDVIVGFPGETNEEFKQTYEFLKDIELAQM 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            +++ +  KGT   KM    D  +      
Sbjct: 328 HIFKYSPRKGTPAAKMDNQIDPQVKHMRSE 357


>gi|154505211|ref|ZP_02041949.1| hypothetical protein RUMGNA_02724 [Ruminococcus gnavus ATCC 29149]
 gi|153794409|gb|EDN76829.1| hypothetical protein RUMGNA_02724 [Ruminococcus gnavus ATCC 29149]
          Length = 353

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 17/196 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+HV RY++ +E      L+  +   +L     +          + 
Sbjct: 66  YCRNNCYYCGIRSGNTHVHRYRLTKEE----ILSCCETGYELGFRTFVLQGGEDPYYTTA 121

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                   + D +    T   +  IT+           +Q    AG NR  L  ++   +
Sbjct: 122 -------RLSDVVHTIRTTYPDCAITLST--GEATKEEYQQLFDAGANRFLLRHETYNTE 172

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + L     +A+     +   + I  ++    +   P QT      +L          +
Sbjct: 173 HYQKLHPAQLSAAHRQQCLWDLKEIGYQVGTGFMVGSPWQTSEHLAEDLLFLKELNPQMV 232

Query: 203 SLYQLTIEKGTLFYKM 218
            +        T F   
Sbjct: 233 GIGPFIPHHDTPFAGQ 248


>gi|116748286|ref|YP_844973.1| biotin synthase [Syntrophobacter fumaroxidans MPOB]
 gi|116697350|gb|ABK16538.1| biotin synthase [Syntrophobacter fumaroxidans MPOB]
          Length = 344

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR       +  +         +       + +   G  P+    +
Sbjct: 50  CRRDCLYCG----LRRSNKNLVRYRMAPREIFAQAAEAANLGFRTVVLQSGEDPAY-TIR 104

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  I    +++  + +            +F   ++AGV+R  L  ++ +    R 
Sbjct: 105 ALCSLVREIKSELSLAVTLCV------GERTREDFLRLKQAGVDRYLLRFETSDPCLFRI 158

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L  + +       +   + I  ++    I  LP QTM     ++ +     +D + L   
Sbjct: 159 LKPDSDYERRFRCLEWLKAIGFQVGSGNIVGLPGQTMESLAEDILKFREMRLDMVGLGPF 218

Query: 208 TIEKGTLFY 216
                T   
Sbjct: 219 IAHPDTPLQ 227


>gi|225175074|ref|ZP_03729070.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
           1]
 gi|225169250|gb|EEG78048.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
           1]
          Length = 431

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC   +       +  ++   ++     Q   ++     +    +G   P  + 
Sbjct: 151 CRQFCSYCIVPYARGPLHSRPPEDAAAEAERLAEQGFSEMVLS-GVHLGSYGEDLPGELA 209

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++   L  I K   +           P+ +  +  +           + + +QS ++ 
Sbjct: 210 LSDLIRELVTIEKIRRIR-----ISSIEPTEITPDLIEVLLDYPKVCRHLHIPLQSGDDH 264

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R ++++E +  I   R   P M+   D++   P +T +Q+E  L+         
Sbjct: 265 VLRRMNRKYDSAEFLQLIRWLRAQIPEMAITTDVMVGFPGETDSQFERTLEVVRKCGFSR 324

Query: 202 LSLYQLTIEKGTLFYK 217
           + +++ +   GT   K
Sbjct: 325 IHVFKYSPRSGTPAAK 340


>gi|254429447|ref|ZP_05043154.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
 gi|196195616|gb|EDX90575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
          Length = 445

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 79/223 (35%), Gaps = 20/223 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-------GGTPSL 83
           C  YC F              +Q  L+E+Q +  + G R ++ +          G     
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVQPVLSEIQHLADM-GVREVNLLGQNVNAYQGVGADGDT 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           ++  ++  ++        +     I     +P        Q Y      V+ + L VQS 
Sbjct: 216 LDLADLIRLI------RDIDGIDRIRYTTSHPVEFSDALIQVYEDVPELVSHLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + RNH   E  + +   + I P +SF  D I   P +T   +E  +       
Sbjct: 270 SDRILAMMKRNHMVLEYKSKLRKLKRIRPDISFSSDFIIGFPGETDRDFEDTMDLIHDIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
            D    +  +   GT    +  D D+ +  + +A+    + Q+
Sbjct: 330 FDMSFSFIYSARPGTPAADLPDDVDMDVKKQRLAILQQRINQN 372


>gi|254562634|ref|YP_003069729.1| Radical SAM superfamily protein [Methylobacterium extorquens DM4]
 gi|254269912|emb|CAX25890.1| Radical SAM superfamily protein [Methylobacterium extorquens DM4]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 60/191 (31%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   +   + E+++  +               T +L   +
Sbjct: 206 CKSRCTFCLWPQTVG-GHTYRTRSVAHVIEEIKYCLKEFPQTKEFFFDDDTFTDNLPRAE 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++   +  E           +  +  G+  + +G +S  +Q L  
Sbjct: 265 EIARELGKLGVTWSCNAKANVPYET---------LKVLKDNGLRLLLVGYESGNQQILNN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +   +    I  LP +T    +  +  A       + +   
Sbjct: 316 IKKGMRVEVAEKFTKNCHELGIAIHGTFIVGLPGETKETIQETIAFAKRINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  YK 
Sbjct: 376 APYPGTFLYKQ 386


>gi|288572914|ref|ZP_06391271.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288568655|gb|EFC90212.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 432

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 72/233 (30%), Gaps = 22/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-----GTPS 82
           C   C YC                +     E++ + +   P  + +    G     G P 
Sbjct: 154 CDHFCSYC---IIPFLRGKPVSRPLDDLEREVRSVVESGCPEIVLTGVHLGLYGREGGP- 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSL 140
                 +A +L  +     V      ++E  P SV  +      +       + L +QS 
Sbjct: 210 -----GLADLLRAVGAIDGVKRIRFGSLE--PFSVGDDLLDAMAEIESFCPHLHLPLQSG 262

Query: 141 EEQSLRFLGRNHNASEA---IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +++ L  +GR H A E    +  I  A      +S D++   P +    +   L      
Sbjct: 263 DDRVLNAMGRGHTADEYLSLLDRIKSAMGEDVHISTDILVGFPGEDDLAFANTLSVLELG 322

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +  +  +  +  KGT    +       + +E     +    + +   +    
Sbjct: 323 GIGRIHSFPYSPRKGTKAASLPDRPPKSI-AEERCKTVIEKGRELLDRYVSRW 374


>gi|254479410|ref|ZP_05092742.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214034655|gb|EEB75397.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 564

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC          V +   ++    +++W         I  +       +    +
Sbjct: 183 CPFKCAYC----LSSIDNVLRYESLEKVEKDLKWFAN--KNVKILKLVDRSFNANRKRAR 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEEQSLR 146
            I  I+        +   +    E NP  V            G  +  +GVQ+  + +LR
Sbjct: 237 EILSIMK------RIEGEMVFHCEVNPELVNEEFISELEDLKGRIQFEVGVQTTNKVTLR 290

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R      A+  I L +    ++  DLI  LP+ ++  +        +   + + L  
Sbjct: 291 KISRTTAVEMALKGIELLKKAGIKLHVDLIAGLPEDSLKTFSKAFDDVYNLKPEEIQLGF 350

Query: 207 LTIEKGTLFYKMH 219
           L I KGT   K  
Sbjct: 351 LKILKGTPLAKKV 363


>gi|163852869|ref|YP_001640912.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium extorquens PA1]
 gi|218531695|ref|YP_002422511.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium chloromethanicum CM4]
 gi|240140197|ref|YP_002964674.1| Radical SAM superfamily protein [Methylobacterium extorquens AM1]
 gi|163664474|gb|ABY31841.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium extorquens PA1]
 gi|218523998|gb|ACK84583.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium chloromethanicum CM4]
 gi|240010171|gb|ACS41397.1| Radical SAM superfamily protein [Methylobacterium extorquens AM1]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 60/191 (31%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   +   + E+++  +               T +L   +
Sbjct: 206 CKSRCTFCLWPQTVG-GHTYRTRSVAHVIEEIKYCLKEFPQTKEFFFDDDTFTDNLPRAE 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++   +  E           +  +  G+  + +G +S  +Q L  
Sbjct: 265 EIARELGKLGVTWSCNAKANVPYET---------LKVLKDNGLRLLLVGYESGNQQILNN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +   +    I  LP +T    +  +  A       + +   
Sbjct: 316 IKKGMRVEVAEKFTKNCHELGIAIHGTFIVGLPGETKETIQETIAFAKRINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  YK 
Sbjct: 376 APYPGTFLYKQ 386


>gi|325265342|ref|ZP_08132066.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
 gi|324029343|gb|EGB90634.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
          Length = 440

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 80/227 (35%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S      + +  ++    + E+  + Q T   ++      G 
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMEKLLKEAQYLAEQGVKELILVAQET---TLYGKDIYG- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  +++ L+L  + +   +       +   P  +     Q  ++     + + L +
Sbjct: 210 ------EKSLHLLLKELCRVQGIRWIR--VLYCYPEEITDELIQVMKEEEKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ LR +GR  +  E    I   R+  P +     LI   P +T  Q E  ++   
Sbjct: 262 QHANDEILRRMGRRTSKQELTDIICKLRSEIPDICLRTTLITGFPGETKEQHEELMEFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L ++  + E+ T    +  D       E    DL  L Q I
Sbjct: 322 EMEFDRLGVFTYSPEEDTP-AALMTDQIDDEVKEERQADLMELQQEI 367


>gi|309785706|ref|ZP_07680337.1| hemN domain protein [Shigella dysenteriae 1617]
 gi|308926826|gb|EFP72302.1| hemN domain protein [Shigella dysenteriae 1617]
          Length = 179

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 56/183 (30%), Gaps = 36/183 (19%)

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE-SLHNLNYWRYGDYIGIGPGAHS 284
           +PS     DLY          G      S+      E +L+NL   +  D +  G GA  
Sbjct: 1   MPSPAERRDLYLQGCDFMDEAGWRCISNSHWGRTTRERNLYNLLIKQGADCLAFGSGAGG 60

Query: 285 RVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR-------- 336
            +       +   E++ ++W + V                      LMM +R        
Sbjct: 61  SING----YSWMNERNLQTWHESVTAGKKP----------------LMMIMRNAERNAQW 100

Query: 337 ---LREGISVKDW---EMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVI 390
              L+ G+        E+               ++G   R   + LR T  G     +++
Sbjct: 101 RHTLQSGVETARVPLDELTPHAEKLAPLLAQWHQKGL-SRDASTCLRLTNEGRFWASNIL 159

Query: 391 ANL 393
            +L
Sbjct: 160 QSL 162


>gi|229031402|ref|ZP_04187403.1| hypothetical protein bcere0028_34560 [Bacillus cereus AH1271]
 gi|228729897|gb|EEL80876.1| hypothetical protein bcere0028_34560 [Bacillus cereus AH1271]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 80/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 FE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P    + D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVFTTDIIVGFPNETNEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +    + Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNTLVNTLAIEKNNRY 442


>gi|229071269|ref|ZP_04204493.1| hypothetical protein bcere0025_34430 [Bacillus cereus F65185]
 gi|229081024|ref|ZP_04213537.1| hypothetical protein bcere0023_36650 [Bacillus cereus Rock4-2]
 gi|228702338|gb|EEL54811.1| hypothetical protein bcere0023_36650 [Bacillus cereus Rock4-2]
 gi|228711890|gb|EEL63841.1| hypothetical protein bcere0025_34430 [Bacillus cereus F65185]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P +    D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM    ++ +  +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKM--KDNVPMQVKKERLQRLNTLVNTLAIEKNSRY 442


>gi|42782856|ref|NP_980103.1| hypothetical protein BCE_3806 [Bacillus cereus ATCC 10987]
 gi|81409496|sp|Q732V4|MIAB_BACC1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|42738783|gb|AAS42711.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 82/232 (35%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +    + Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNNRY 442


>gi|134300368|ref|YP_001113864.1| radical SAM domain-containing protein [Desulfotomaculum reducens
           MI-1]
 gi|134053068|gb|ABO51039.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1]
          Length = 296

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 13/227 (5%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    ++R     +   +     E+Q M        +  +F   G   ++  
Sbjct: 27  CSHNKCTFCSMYRNIR----FRVRSLDEVECEIQQMASFYPG--LRRVFLADGNALVLNT 80

Query: 87  QNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  I+  +   + + + +       +    + +  +  ++AG+  I LG++S ++Q L
Sbjct: 81  DKLLAIMKKLHVAFPMLTRITCYGAPKDILHKKPDELKALQRAGLQIIYLGIESGDDQVL 140

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
             + +   A+E IAA         ++S  +I  L  Q  T +      +   +     L 
Sbjct: 141 SDINKGVTANEMIAAGQRVLEAGIKLSAMVILGLGGQQYTNSHALNTARVINAIGPTMLG 200

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  L +  GT        GD +  +    +      + +     +  
Sbjct: 201 VLTLALFDGTPLKDAVDRGDFLPLTTRETLLE---LKEMLENINVQQ 244


>gi|322435958|ref|YP_004218170.1| RNA modification enzyme, MiaB family [Acidobacterium sp. MP5ACTX9]
 gi|321163685|gb|ADW69390.1| RNA modification enzyme, MiaB family [Acidobacterium sp. MP5ACTX9]
          Length = 440

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 11/199 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
              C K C YC     V  Y  G E   +S  + M+  R++           G    S  
Sbjct: 152 IEGCDKFCAYC-----VVPYTRGNERS-RSAASVMEEARRMADSGYTEIQLLGQNVNSYR 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +P       + +    T+     +     +P     +  +         + + L VQS  
Sbjct: 206 DPSGAKSFAELLHAVGTIPGIRRVRFTTSHPRDFTRDIVEVIDATPTLCDHVHLPVQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +  I   +     +S   D+I   P +T    E       +   
Sbjct: 266 TRILAAMAREYTREWYLERIAWMKAAKRDISMTSDIIVGFPGETDEDLEDTATLLDAVGY 325

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D +  ++ +    T    M
Sbjct: 326 DAIFAFKYSPRPNTPSVSM 344


>gi|194334797|ref|YP_002016657.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Prosthecochloris aestuarii DSM 271]
 gi|229890596|sp|B4S564|MIAB_PROA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|194312615|gb|ACF47010.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
           DSM 271]
          Length = 441

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 81/218 (37%), Gaps = 20/218 (9%)

Query: 10  NMTGQGSNSLGVYVHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           ++    S S+  +   P    C   C +C     V  +  G+E   +S  + +  +R+L 
Sbjct: 136 DIEPMRSGSISAF--IPVMRGCNNMCAFC-----VVPFTRGRERS-RSLQSVLDEVRRLE 187

Query: 67  GPRSISSIFFGGGTPSLIEPQ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           G         G    S  + +   + AL+LD ++K          T  ++P  +  +   
Sbjct: 188 GQGYRELTLLGQNVNSYRDDEAGADFALLLDEVSKAAGEMRVRFTT--SHPKDISEDLVN 245

Query: 124 GY--RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYAL 179
               R+   N I L VQS   + L  + R H   E +  I + R+  P +  S DLI   
Sbjct: 246 VVAQRENVCNAIHLPVQSGSSRMLEVMHRGHTRREYLDKIAMIRSAVPGVALSTDLIAGF 305

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             +T       L        D+  ++  ++  GT   +
Sbjct: 306 CGETEEDHLQTLSLMEEVRFDYAYMFYYSVRPGTYAAR 343


>gi|116625754|ref|YP_827910.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Solibacter
           usitatus Ellin6076]
 gi|122252074|sp|Q01RU5|MIAB_SOLUE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|116228916|gb|ABJ87625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 445

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 16/197 (8%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
              C K C YC     V  +  G E   ++  + M   R LT          G    S  
Sbjct: 155 IEGCDKACAYC-----VVPFTRGPERS-RTSESVMAEARGLTEKGYTEVQLLGQNVNSYR 208

Query: 85  EP----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQ 138
           +P     + A +L  +A+   +      T  ++P              +A  + I L VQ
Sbjct: 209 DPSPAGWDFATLLAKVAEIPGMRRVRYTT--SHPRDFVRPIVDAMDANEAICDHIHLPVQ 266

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L  + R +   E +  I   ++   R S   D+I   P +T   +E  L     
Sbjct: 267 SGSSKVLAAMDRLYTRDEYLRRIDWIKSAKRRYSLTTDIIIGFPGETDADFEQTLDLLDE 326

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  ++ +    T
Sbjct: 327 VQYDSLFSFKYSPRPNT 343


>gi|331090671|ref|ZP_08339520.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400085|gb|EGG79736.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 309

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C   S          + I     ++ + ++L   +        +F   T +     +
Sbjct: 47  CIFC---SAGGSGDFSAPSSID-IREQIAYGKKLVERKYKGHSYIAYFQAYTNTYAPVSH 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I     +   +     ++I   P  +  +      K    +   + LG+Q++ E+S 
Sbjct: 103 LEKIFTEAIQEPEIK---ILSIATRPDCLGKDVLDLLAKLNQIKPVWVELGLQTIHEKSA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            F+ R +      +A+   R I   +    I  LP +T       +       +  + L 
Sbjct: 160 EFIRRGYTLDVFESAVKNLRAIGITVIVHTILGLPNETEEMMLETISYLNQLDIQGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L I KGT      K+    LPS    + L +   S+     +  
Sbjct: 220 LLHILKGTDMAVFFKNDKFYLPSLEEYMVLLSRCISLLRPDIVVH 264


>gi|325300386|ref|YP_004260303.1| hypothetical protein Bacsa_3304 [Bacteroides salanitronis DSM
           18170]
 gi|324319939|gb|ADY37830.1| Conserved hypothetical protein CHP01212 [Bacteroides salanitronis
           DSM 18170]
          Length = 309

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 8/195 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC+ N          E  I   L E +       P+     +F   T +      +  
Sbjct: 45  CTYCN-NQTFNPAYCRTEKTIAVQLEEGKQFFSRKYPQMKYLAYFQAYTNTY---AGLDS 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           ++    +   V   V + I   P  +     +  +         +  G++S ++ +LR +
Sbjct: 101 LVRMYEEALGVPDVVGLVIGTRPDCMPDALLDYLEELNNRTFLLVEYGIESTDDGTLRRI 160

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QTMTQWEMELQRALSYAVDHLSLYQL 207
            R H  +    A+        R    +I  LP  +   +   + +      +  L L+QL
Sbjct: 161 NRGHTFACTEDAVRRTSARGIRTGGHVIVGLPGEEGRDKIIRQAEILSGLPLVTLKLHQL 220

Query: 208 TIEKGTLFYKMHKDG 222
            + KGT   + +   
Sbjct: 221 QLIKGTRMGEEYLRC 235


>gi|307130060|ref|YP_003882076.1| isopentenyl-adenosine A37 tRNA methylthiolase [Dickeya dadantii
           3937]
 gi|306527589|gb|ADM97519.1| isopentenyl-adenosine A37 tRNA methylthiolase [Dickeya dadantii
           3937]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F              +   L E+  +    G R +     ++    G    
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               +I    + +    T+     I  I ++P     +    Y      V+ + L VQS 
Sbjct: 211 -HNDDICSFAELLRLVATIDGIDRIRFITSHPIEFTDDIISVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   RN  P  ++S D I   P +T   +E  ++      
Sbjct: 270 SDRVLTMMKRRHTALEYKAIIRKLRNARPAIQISSDFIVGFPGETQEDFEQTMKLIADVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    M 
Sbjct: 330 FDMSFSFIYSPRPGTPAADMV 350


>gi|302872837|ref|YP_003841473.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302575696|gb|ADL43487.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 351

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 68/192 (35%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     NS  +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRKSNSQAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMF 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  I +N  V+    IT+     S +   ++ ++ AG +R  +  ++  E+
Sbjct: 114 YTKDRMCSIIKKIKQNVDVA----ITLSIGERSYDE--YKAFKDAGADRFLMRFETSNEK 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R      +  + I  +   +++   +    +  LP QT+     ++        D + 
Sbjct: 168 LYRQYHPGMSFEKRIECLKWLKSLGYELGTGFLIGLPGQTIDDLAQDILLVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|218682221|ref|ZP_03529822.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli CIAT 894]
          Length = 394

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + E + + +  G R I+    ++    G  S 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLVE-GGVREITLLGQNVNAWHGAGSG 238

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E  ++  +L  +A+   ++     T  ++P  ++    + +R     +  + L VQS  
Sbjct: 239 GEAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIEAHRDLRALMPYLHLPVQSGS 296

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A+E ++ I   R + P ++   D I   P +T   +E  L+       
Sbjct: 297 DRILKAMNRRHTAAEYLSLIARIRAVRPDIALSGDFITGFPGETDADFEDTLRLVAEVRY 356

Query: 200 DHLSLYQLTIEKGTL 214
                ++ +   GT 
Sbjct: 357 AQAFSFKYSTRPGTP 371


>gi|120437909|ref|YP_863595.1| tRNA-i(6)A37 modification enzyme MiaB [Gramella forsetii KT0803]
 gi|229890549|sp|A0M7D3|MIAB_GRAFK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|117580059|emb|CAL68528.1| tRNA-i(6)A37 modification enzyme MiaB [Gramella forsetii KT0803]
          Length = 481

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 4/111 (3%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + ++  +         N I L VQS  ++ L+ + R H   E    I   + + P
Sbjct: 273 SNPQDMTLDVIEAMAAYRNICNYIHLPVQSGSDRILKKMNRLHTREEYFTLIDNIKKMIP 332

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              +S DLI   P +T    +  L        D   ++  +   GT   + 
Sbjct: 333 NCGISHDLITGFPTETEEDHQDTLSLMEYVKYDFGYMFTYSERPGTTAERK 383


>gi|229890691|sp|Q0ABN9|MIAB_ALHEH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 448

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLIEPQ 87
           C  YC F               +  + E+  + +  G R ++ +         P  +   
Sbjct: 156 CSKYCSFCVVPYTRGEEISRPFEDVIAEVASLAEQ-GVREVTLLGQNVNAYRGP--MADG 212

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +  +   I     +     I     +P     +  + YR+       + L VQS  +  
Sbjct: 213 TVCDLALLIHYVAALDGIGRIRFTTSHPVEFSDSLIEAYREEPKLAGHLHLPVQSGSDLV 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H A+E +  I   +   P +S   D I   P ++   +E  L+   +   D  
Sbjct: 273 LKLMKRGHTAAEYLDKIERIKAARPGISIASDFIVGYPGESEADFEDTLRLIEAVGFDQS 332

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 333 FSFLYSPRPGTP 344


>gi|49478367|ref|YP_037833.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|52141716|ref|YP_085113.1| tRNA 2-methylthioadenine synthetase [Bacillus cereus E33L]
 gi|196038441|ref|ZP_03105750.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|81395139|sp|Q6HF43|MIAB_BACHK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81686624|sp|Q636Q4|MIAB_BACCZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|49329923|gb|AAT60569.1| conserved hypothetical protein, possible tRNA 2-methylthioadenine
           synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51975185|gb|AAU16735.1| conserved hypothetical protein; possible tRNA 2-methylthioadenine
           synthetase [Bacillus cereus E33L]
 gi|196030849|gb|EDX69447.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 442


>gi|20094517|ref|NP_614364.1| 2-methylthioadenine synthetase [Methanopyrus kandleri AV19]
 gi|19887629|gb|AAM02294.1| 2-methylthioadenine synthetase [Methanopyrus kandleri AV19]
          Length = 423

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 18/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--- 82
           C  +C YC      R        E  ++    E++         +  +  +G    +   
Sbjct: 146 CPNRCAYCA-VKLARGNLRSFPPERILRRVKRELERGAVEIHLTAQDTATYGLDRGTNVV 204

Query: 83  -LIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            L+E   ++        +    +      I  + + +  +      ++    I + VQS 
Sbjct: 205 ELLEDVVDLCSRYGARVRLGMFNPGHAYPISDDLADLFASRDDVLYRS----IHMPVQSG 260

Query: 141 EEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++ LR + RN+   EA+        R  +     D+I   P +T   +   L+      
Sbjct: 261 DDEVLRRMNRNYTVEEALEVYRAFERRLGYFSFITDVIVGFPGETEEAFRNTLRFLERTR 320

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              L   +     GT   +M    +  +P +        L +           E+
Sbjct: 321 PHILHASRFCRRPGTPAARM----EDQVPEDVKLRRSRILHRKRLEWAEEANREL 371


>gi|114319555|ref|YP_741238.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225949|gb|ABI55748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 508

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLIEPQ 87
           C  YC F               +  + E+  + +  G R ++ +         P  +   
Sbjct: 216 CSKYCSFCVVPYTRGEEISRPFEDVIAEVASLAEQ-GVREVTLLGQNVNAYRGP--MADG 272

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +  +   I     +     I     +P     +  + YR+       + L VQS  +  
Sbjct: 273 TVCDLALLIHYVAALDGIGRIRFTTSHPVEFSDSLIEAYREEPKLAGHLHLPVQSGSDLV 332

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H A+E +  I   +   P +S   D I   P ++   +E  L+   +   D  
Sbjct: 333 LKLMKRGHTAAEYLDKIERIKAARPGISIASDFIVGYPGESEADFEDTLRLIEAVGFDQS 392

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 393 FSFLYSPRPGTP 404


>gi|312171728|emb|CBX79986.1| UPF0004 protein PA3980 [Erwinia amylovora ATCC BAA-2158]
          Length = 480

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 73/231 (31%), Gaps = 16/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTP---S 82
           C K C +C       R +              Q   Q     ++   ++    G      
Sbjct: 163 CNKYCTFC--VVPYTRGEEVSRPADDILFEVAQLAAQGVREVNLLGQNVNAYRGATYDGG 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  ++  I        +      ++P     +  + YR     V+ + L VQS 
Sbjct: 221 ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSYLHLPVQSG 275

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   LA     ++S D I   P +T   +E  ++      
Sbjct: 276 ADRILTLMKRAHTALEYKAIIRKLLAARPDIQISSDFIIGFPGETQADFEQTMKLVGEIN 335

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            D    +  +   GT   ++  D       + + V    ++Q   +     
Sbjct: 336 FDTSYSFIYSARPGTPAAELPDDVSEDEKKQRLYVLQDRISQQAMAWSRRK 386


>gi|292487621|ref|YP_003530493.1| hypothetical protein EAMY_1135 [Erwinia amylovora CFBP1430]
 gi|291553040|emb|CBA20085.1| UPF0004 protein PA3980 [Erwinia amylovora CFBP1430]
          Length = 480

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 73/231 (31%), Gaps = 16/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTP---S 82
           C K C +C       R +              Q   Q     ++   ++    G      
Sbjct: 163 CNKYCTFC--VVPYTRGEEVSRPADDILFEVAQLAAQGVREVNLLGQNVNAYRGATYDGG 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  ++  I        +      ++P     +  + YR     V+ + L VQS 
Sbjct: 221 ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSYLHLPVQSG 275

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   LA     ++S D I   P +T   +E  ++      
Sbjct: 276 ADRILTLMKRAHTALEYKAIIRKLLAARPDIQISSDFIIGFPGETQADFEQTMKLVGEIN 335

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            D    +  +   GT   ++  D       + + V    ++Q   +     
Sbjct: 336 FDTSYSFIYSARPGTPAAELPDDVSEDEKKQRLYVLQDRISQQAMAWSRRK 386


>gi|292898859|ref|YP_003538228.1| MiaB protein (methylthiolation of isopentenylated A37 derivatives I
           rRNA) [Erwinia amylovora ATCC 49946]
 gi|291198707|emb|CBJ45816.1| MiaB protein (methylthiolation of isopentenylated A37 derivatives I
           rRNA) [Erwinia amylovora ATCC 49946]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 73/231 (31%), Gaps = 16/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTP---S 82
           C K C +C       R +              Q   Q     ++   ++    G      
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPADDILFEVAQLAAQGVREVNLLGQNVNAYRGATYDGG 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  ++  I        +      ++P     +  + YR     V+ + L VQS 
Sbjct: 215 ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIEVYRDTPELVSYLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   LA     ++S D I   P +T   +E  ++      
Sbjct: 270 ADRILTLMKRAHTALEYKAIIRKLLAARPDIQISSDFIIGFPGETQADFEQTMKLVGEIN 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            D    +  +   GT   ++  D       + + V    ++Q   +     
Sbjct: 330 FDTSYSFIYSARPGTPAAELPDDVSEDEKKQRLYVLQDRISQQAMAWSRRK 380


>gi|222084693|ref|YP_002543222.1| 2-methylthioadenine synthetase (miaB-like) protein [Agrobacterium
           radiobacter K84]
 gi|221722141|gb|ACM25297.1| 2-methylthioadenine synthetase (miaB-like) protein [Agrobacterium
           radiobacter K84]
          Length = 470

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 72/226 (31%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + +    G R I+ +      + G  P 
Sbjct: 188 CDKFCTFC---VVPYTRGSEVSRSVAQIVEEAEKLVD-GGVREITLLGQNVNAWHGAGP- 242

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    + D + +   +     +     +P  ++      +R     +  + L VQS
Sbjct: 243 ---KGEAWSLGDLLYRLSEIPGLARLRYTTSHPRDMDDRLISAHRDLRTLMPYLHLPVQS 299

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R H A+E  A I   R   P ++   D I   P +T   +   L+     
Sbjct: 300 GSNRILKAMNRRHTAAEYFALIEKIRAARPDIALSGDFIVGFPGETEQDFADTLRLVEEV 359

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  ++ +   GT   ++          E +  +     Q++ 
Sbjct: 360 NYAQAFSFKYSTRPGTPGAELKDQV-----PEEIKAERLERLQALL 400


>gi|126178881|ref|YP_001046846.1| radical SAM domain-containing protein [Methanoculleus marisnigri
           JR1]
 gi|125861675|gb|ABN56864.1| Radical SAM domain protein [Methanoculleus marisnigri JR1]
          Length = 369

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 58/196 (29%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLIEP 86
           C   C YC           G+    +S    +++  +    R ++   F  G     +  
Sbjct: 144 CPFSCGYC-----QTPRLFGRCMRHRSIDEIVRYASRYRDIRFVTPNAFAYGSDGVHLRL 198

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSL 145
             +  +L  +       +      E  P  +   + +       N R+  G QS  ++ L
Sbjct: 199 DKVERLLRSLKGRVYFGT---FPGEVRPECISQQSVELVLDTCANTRLHFGAQSGSDRVL 255

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA-LSYAVDHLSL 204
           R L R H   + + A  L R        D I  LP ++       L    +        +
Sbjct: 256 RHLHRGHTVEDVVRAFDLCREHGLVPVVDFILGLPFESDDDQRATLDLVKMVTRGGKAHI 315

Query: 205 YQLTIEKGTLFYKMHK 220
           +      GT       
Sbjct: 316 HYFMPLPGTPLQNARP 331


>gi|20807472|ref|NP_622643.1| Fe-S oxidoreductase family protein [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515999|gb|AAM24247.1| Fe-S oxidoreductases family 2 [Thermoanaerobacter tengcongensis
           MB4]
          Length = 562

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC          V +   ++    +++W         I  +       +    +
Sbjct: 181 CPFKCAYC----LSSIDNVLRYESLEKVEKDLKWFAN--KNVKILKLVDRSFNANRKRAR 234

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEEQSLR 146
            I  I+        +   +    E NP  V            G  +  +GVQ+  + +LR
Sbjct: 235 EILSIMK------RIEGEMVFHCEVNPELVNEEFISELEDLKGRIQFEVGVQTTNKVTLR 288

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R      A+  I L +    ++  DLI  LP+ ++  +        +   + + L  
Sbjct: 289 KISRTTAVEMALKGIELLKKAGIKLHVDLIAGLPEDSLKTFSKAFDDVYNLKPEEIQLGF 348

Query: 207 LTIEKGTLFYKMH 219
           L I KGT   K  
Sbjct: 349 LKILKGTPLAKKV 361


>gi|30263778|ref|NP_846155.1| hypothetical protein BA_3908 [Bacillus anthracis str. Ames]
 gi|47529199|ref|YP_020548.1| hypothetical protein GBAA_3908 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49186622|ref|YP_029874.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           anthracis str. Sterne]
 gi|165872391|ref|ZP_02217026.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167635860|ref|ZP_02394169.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167639855|ref|ZP_02398124.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170687836|ref|ZP_02879050.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170706889|ref|ZP_02897347.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652051|ref|ZP_02934597.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190568422|ref|ZP_03021329.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227813320|ref|YP_002813329.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           CDC 684]
 gi|229602893|ref|YP_002868014.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           A0248]
 gi|254683519|ref|ZP_05147379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           CNEVA-9066]
 gi|254722040|ref|ZP_05183829.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           A1055]
 gi|254735812|ref|ZP_05193518.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           Western North America USA6153]
 gi|254739662|ref|ZP_05197356.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           Kruger B]
 gi|254751058|ref|ZP_05203097.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           Vollum]
 gi|254759376|ref|ZP_05211401.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           Australia 94]
 gi|81583703|sp|Q81WR0|MIAB_BACAN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|30258422|gb|AAP27641.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47504347|gb|AAT33023.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49180549|gb|AAT55925.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|164711829|gb|EDR17371.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167512256|gb|EDR87633.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167528817|gb|EDR91575.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170128307|gb|EDS97176.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170668152|gb|EDT18901.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172082420|gb|EDT67485.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190560426|gb|EDV14404.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227004716|gb|ACP14459.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           CDC 684]
 gi|229267301|gb|ACQ48938.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
           A0248]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 442


>gi|158522883|ref|YP_001530753.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511709|gb|ABW68676.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 520

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  KC +C       R  VG   +    +  + E++ +      R   +  F    P   
Sbjct: 194 CPGKCIFC-----QGRRMVGSRVRNRDPRRVVDEIESLLAFGFERINFADDFFTSNP--- 245

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
                  +    A+    +     T+ A   SV        R AG + I  G +S +++ 
Sbjct: 246 -----RRVRAVCAEIERRNLKFCWTVFARADSVTPELLAQMRHAGCDTIFFGFESGDQEM 300

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  +G+         A+  ++    R+    I  LP +T        + A     ++   
Sbjct: 301 LDRIGKTITLDRIRRAVADSKAAGMRVFGSFIVGLPGETAETLAASDRFARELGAEYGYH 360

Query: 205 YQLTIEKGTLFYKMHKDGDLVL 226
           + L    GT   +   D DL L
Sbjct: 361 F-LVPFPGTDVKEHIGDYDLEL 381


>gi|170728025|ref|YP_001762051.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           woodyi ATCC 51908]
 gi|229890658|sp|B1KDV4|MIAB_SHEWM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169813372|gb|ACA87956.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella woodyi ATCC
           51908]
          Length = 474

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 78/252 (30%), Gaps = 18/252 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K   YC F              +   + E+  +
Sbjct: 133 IEKFDRLPEPRADGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPLDDVILEIAQL 188

Query: 63  RQLTGPRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
            +  G R +     ++    G         I    + +     +     +     +P   
Sbjct: 189 AEQ-GVREVNLLGQNVNAYRGAT---HDDEICTFAELLRYVAAIDGIDRLRFTTSHPIEF 244

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SF 173
             +    Y      V+ + L VQS  ++ L  + R H A E  + I   R   P +  S 
Sbjct: 245 TQDIIDVYEDTPELVSFLHLPVQSGSDRILTQMKRGHMAIEYKSIIRRLRKARPDIQVSS 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P ++   +E  ++       DH   +  +   GT    +  D  L    E +A+
Sbjct: 305 DFIIGFPGESKQDFEDTMKLIEDVQFDHSFSFIYSARPGTPASDLPDDVTLDEKKERLAI 364

Query: 234 DLYNLTQSITSA 245
               +TQ     
Sbjct: 365 LQDRITQQAMRY 376


>gi|300728328|ref|ZP_07061694.1| tRNA-I(6)A37 modification enzyme MiaB [Prevotella bryantii B14]
 gi|299774440|gb|EFI71066.1| tRNA-I(6)A37 modification enzyme MiaB [Prevotella bryantii B14]
          Length = 285

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSLIEPQ 87
           C YC            +   ++S L E++      G + ++    ++   G  P+   P+
Sbjct: 1   CHYC---IVPFTRGRERSRDVESILREVK-DLHDKGFKEVTLLGQNVNSYGLLPNGKRPE 56

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N     + + K      ++ +     NP  +  +  Q         + I    QS  ++ 
Sbjct: 57  NGTSFAELLRKVAESVPDMRVRFTTSNPEDMTEDILQAIADEPNLCHHIHFPAQSGSDKV 116

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   + +  I     I P      D+      +T   ++  L        D  
Sbjct: 117 LKLMNRKYTREKYMKTIDAIHRIIPDCGITTDVFVGYHDETEEDFQQTLSLMKEVGFDSA 176

Query: 203 SLYQLTIEKGTL 214
            +++ +   GT 
Sbjct: 177 FMFKYSERPGTY 188


>gi|197118030|ref|YP_002138457.1| MiaB-like tRNA-modifying enzyme [Geobacter bemidjiensis Bem]
 gi|197087390|gb|ACH38661.1| MiaB-like tRNA-modifying enzyme [Geobacter bemidjiensis Bem]
          Length = 429

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 67/211 (31%), Gaps = 10/211 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C  +C YC            +   +Q  L  M           + + I  G     L   
Sbjct: 152 CDARCAYC---IVPYARGASRSVAVQEALDGMAAFAAQGFQEIVLTGIHLGAYGLDLAPA 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++  ++    +   V      ++E  P+ V         ++      + L +QS  +  
Sbjct: 209 TDLLGLMQKAQEQGVVRRLRIGSVE--PTEVSKQLIDFMARSPMVCPHLHLPLQSGSDSV 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R ++ +     +    +  P +    D+I   P ++  +++   +   S  + +L
Sbjct: 267 LSRMNRGYDTALFREVVQSLASAMPEVCIGSDVIAGFPGESDQEFDETYRFIDSLPLAYL 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            ++  +   GT    M       +  E    
Sbjct: 327 HVFPFSQRPGTPAATMTPQVHPKVIKERAEA 357


>gi|331085298|ref|ZP_08334384.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330408081|gb|EGG87571.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 440

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S      V + E   +  + E+  + Q             G 
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMEQLVREAEELAEQGVKELILVAQ--------ETTLYGK 205

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   +++  +L  + K   +       +   P  +     Q  ++     + + L +
Sbjct: 206 D--LYGEKSLHKLLKELCKIAGIRWIR--VLYCYPEEITDELIQVMKEESKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  + ++ I  I   R   P ++    LI   P +T  Q E  +    
Sbjct: 262 QHASDGILKRMGRRTSKAQLIEIIEKLRREIPDITLRTTLITGFPGETEEQHEELMDFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L ++  + E+ T    M    +  +  E+   +L  L Q I
Sbjct: 322 QMEFDRLGVFTYSPEEDTPAATMPDQIEENV-KEDRQAELMELQQDI 367


>gi|269125534|ref|YP_003298904.1| Radical SAM domain-containing protein [Thermomonospora curvata DSM
           43183]
 gi|268310492|gb|ACY96866.1| Radical SAM domain protein [Thermomonospora curvata DSM 43183]
          Length = 451

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 21/170 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           CV  C +C   +        +   +++    ++ M    G R +  I     TP+ +   
Sbjct: 180 CVYACRFC--QTPFMFSAKFRHRSVENVKRHVEQMVAH-GRRDVRFI-----TPTSLSYG 231

Query: 86  -------PQNIALILDGIAKNWTVSSNVEI---TIEANPSSVEVNNFQGYRKAGVN-RIS 134
                   + +  +L            V       E  P  V V   +  ++   N  + 
Sbjct: 232 SGDENVNLEAVEELLAACKSVVGKQGRVFFGSFPSEVRPEHVSVRALRLIKRYCANDNLI 291

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
           +G QS   + L    R H   E   A+ +      R++ D+I+ +P +T 
Sbjct: 292 IGAQSGSARVLEAAKRGHGVQEVRDAVRIGVQEGFRINVDMIFGMPGETP 341


>gi|147677673|ref|YP_001211888.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pelotomaculum
           thermopropionicum SI]
 gi|229890589|sp|A5D2K1|MIAB_PELTS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146273770|dbj|BAF59519.1| 2-methylthioadenine synthetase [Pelotomaculum thermopropionicum SI]
          Length = 448

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +S     + + +L G      I  G    S    +
Sbjct: 158 CNNFCTYC-----IVPYVRGREKS-RSPEAVYEEVARLAGEGFKEVILLGQNVNSYGKDL 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +     L    +N      +   + ++P    +   +    +        L VQ+   
Sbjct: 212 GVKTDFASLLESLENIDGIDRIRY-MTSHPRDFSLRLVEAIAASKKVCEHFHLPVQAGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E +  I   +++ P   ++ D++   P +T   +   L        D
Sbjct: 271 RILKKMNRGYTREEYVDLIRYIKSLIPHATVTTDIMVGFPGETDEDFNDTLDLVREIRFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
               +   I  GT   +M   
Sbjct: 331 SAYTFVYNIRPGTPAAEMPDQ 351


>gi|322383639|ref|ZP_08057390.1| ribosomal protein S12 methylthiotransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321151851|gb|EFX44794.1| ribosomal protein S12 methylthiotransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 446

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + +   +        + +    GG    +E  
Sbjct: 150 CNNFCTFC---IIPWSRGLMRSRDPKSVVQQAHMLVDAGYKEIVLTGIHTGGYGEDMEDY 206

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++A +L  + K   +      +IEA+   +     +    +      + + +Q+ +++ L
Sbjct: 207 SLAKLLWDLDKVDGLERIRISSIEAS--QITDEVLEVLNASDKMCRHLHIPLQAGDDRVL 264

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    I L     P ++   D+I   P +T   +E   +         + 
Sbjct: 265 KRMRRKYTTEEYGRKIELIHKAMPGVAITTDVIVGFPGETEEMFENSYRFMEQMKYSEMH 324

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 325 VFPYSKRTGTPAARMEDQID 344


>gi|329296076|ref|ZP_08253412.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Plautia stali symbiont]
          Length = 474

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 69/228 (30%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDILLEVAQLAAQ-GVREVNLLGQNVNAYRGATF- 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     I     +P     +    YR     V+ + L VQS
Sbjct: 212 ---DDQICTFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDMPELVSFLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I       P +  S D I   P +T   +E  ++     
Sbjct: 269 GADRILTLMKRAHTALEYKAIIRKLVAARPDIQISSDFIIGFPGETQQDFEQTMKLIGEV 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D    +  +   GT    +  D       + + +    + Q   + 
Sbjct: 329 NFDTSFSFIYSARPGTPAADLPDDVPEEEKKQRLYILQDRINQQAMAW 376


>gi|239637917|ref|ZP_04678878.1| radical SAM protein [Staphylococcus warneri L37603]
 gi|239596480|gb|EEQ79016.1| radical SAM protein [Staphylococcus warneri L37603]
 gi|330685452|gb|EGG97107.1| radical SAM protein, TIGR01212 family [Staphylococcus epidermidis
           VCU121]
          Length = 317

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 73/222 (32%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I+    +++              +F   T +    + +  
Sbjct: 52  CTFCS-AAGSGDFAGNRADPIEVQFQQIKERMHEKWSEGQYIAYFQAFTNTHAPVEVLKE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + K   V   V ++I   P  +  +  +   +        + LG+Q++ + +   +
Sbjct: 111 KYEPVLKEEGV---VGLSIATRPDCLPDDVVEYLAELNQRTYLWVELGLQTVHQTTSDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R     +   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMQTYYEGVAKLRKHNINVCTHIINGLPGEDYNMMMETAREVAQMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G L   S+    +L      I     +  
Sbjct: 228 LLKGTPMVKQYEKGMLEFMSQEDYTNLVCDQLEILPPEMIIH 269


>gi|228954049|ref|ZP_04116078.1| hypothetical protein bthur0006_34210 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805615|gb|EEM52205.1| hypothetical protein bthur0006_34210 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 509

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P +    D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|317498496|ref|ZP_07956790.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|291559009|emb|CBL37809.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
           bacterium SSC/2]
 gi|316894189|gb|EFV16377.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 470

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ ++Q+        +  G        +L
Sbjct: 187 CNNFCSYC-----IVPYVRGRERS-RKPEDIIKEVKQVVSEGVKEVMLLGQNVNSYGKTL 240

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  + K   +       +  +P  +  +  +    +      + L +QS  
Sbjct: 241 EEPMSFAELLREVEKVEGLERIRF--MTPHPKDLSDDLIEVMATSKKVCKHMHLPMQSGS 298

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++   + +A     +   P +SF  D+I   P +T   ++  L        
Sbjct: 299 SRLLKLMNRHYTKEQYVALAKKIQERIPGVSFTTDIIVGFPGETEEDFKETLDVVREVGF 358

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    Y  +   GT    M    D
Sbjct: 359 DSAYTYVYSKRSGTPAASMEDQVD 382


>gi|323527295|ref|YP_004229448.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
 gi|323384297|gb|ADX56388.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
          Length = 461

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  +L
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTL 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 KYDTSFSFIYSPRPGTPAANLH 352


>gi|218234533|ref|YP_002368575.1| hypothetical protein BCB4264_A3871 [Bacillus cereus B4264]
 gi|229890421|sp|B7HDP7|MIAB_BACC4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|218162490|gb|ACK62482.1| conserved hypothetical protein [Bacillus cereus B4264]
          Length = 509

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P +    D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|158522366|ref|YP_001530236.1| RNA modification protein [Desulfococcus oleovorans Hxd3]
 gi|229890513|sp|A8ZVH2|MIAB_DESOH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|158511192|gb|ABW68159.1| RNA modification enzyme, MiaB family [Desulfococcus oleovorans
           Hxd3]
          Length = 466

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    +VR  +  +    +  L E++  R   G R I+ +  G    S  + +
Sbjct: 157 CDNFCTYCV-VPYVRGRETSRAP--EHILDEIRA-RVAGGLREITLL--GQNVNSYGQKE 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
            +    D +A+   +     I     +P  +       +       + + L  QS  +  
Sbjct: 211 GLCSFADLLARVNEIDGLHRIRFTTSHPKDLSPELAAAFTSLDKLCSHVHLPAQSGSDAV 270

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +     +  +H  R       +S D+I   P +T   +   L        D +
Sbjct: 271 LKRMNRRYTRQAYLEKLHWLREAQPGMALSTDIIVGFPGETEQDFLQTLDLIEKVRYDSI 330

Query: 203 SLYQLTIEK 211
             +  +   
Sbjct: 331 FAFMYSDRP 339


>gi|190890046|ref|YP_001976588.1| 2-methylthioadenine synthetase (miaB-like) protein [Rhizobium etli
           CIAT 652]
 gi|229890624|sp|B3PZB6|MIAB_RHIE6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|190695325|gb|ACE89410.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli CIAT 652]
          Length = 469

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLVE-AGVREITLLGQNVNAWHGAGPR 238

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++    + +R     +  + L VQS 
Sbjct: 239 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIEAHRDLRALMPYLHLPVQSG 295

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E ++ I   R + P ++   D I   P +T   +E  L+      
Sbjct: 296 SDRILKAMNRRHTAAEYLSLIERIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVR 355

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 356 YAQAFSFKYSTRPGTP 371


>gi|206972613|ref|ZP_03233555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH1134]
 gi|229180049|ref|ZP_04307393.1| hypothetical protein bcere0005_33950 [Bacillus cereus 172560W]
 gi|229191897|ref|ZP_04318867.1| hypothetical protein bcere0002_35540 [Bacillus cereus ATCC 10876]
 gi|206732426|gb|EDZ49606.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH1134]
 gi|228591448|gb|EEK49297.1| hypothetical protein bcere0002_35540 [Bacillus cereus ATCC 10876]
 gi|228603258|gb|EEK60735.1| hypothetical protein bcere0005_33950 [Bacillus cereus 172560W]
          Length = 509

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P +    D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|220929654|ref|YP_002506563.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
           H10]
 gi|219999982|gb|ACL76583.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
           H10]
          Length = 454

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 70/196 (35%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +     ++ ++ L     +  +  G    S     
Sbjct: 174 CSQFCSYC----IIPYARGPIRS--RKPDDIIEEVKHLAESGFLEIVLTGIHLASFGREI 227

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I K  ++     I +    P+++         +         L +QS  +++
Sbjct: 228 KDTNLLDIIKKTHSIDGIKRIRLGSLEPTTITEEFVDAVGRLPKLCPHFHLSLQSGCDKT 287

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E   ++ L +N  P ++   DL+   P +T   + M    A       +
Sbjct: 288 LAEMNRKYRTDEYRKSVELLKNNIPDVAITTDLMVGFPGETEEDFLMSRDFAEEIGFSKI 347

Query: 203 SLYQLTIEKGTLFYKM 218
            +++ +  KGT    M
Sbjct: 348 HVFKYSPRKGTPAAVM 363


>gi|118478993|ref|YP_896144.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           thuringiensis str. Al Hakam]
 gi|118418218|gb|ABK86637.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus thuringiensis
           str. Al Hakam]
          Length = 524

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 236 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 291

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 292 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 347

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 348 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 407

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 408 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 457


>gi|332799055|ref|YP_004460554.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
 gi|332696790|gb|AEE91247.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
          Length = 435

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 9/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   I + + E Q + +      + +    G      + +
Sbjct: 153 CNMFCSYC---IIPYARGPVRSRSIDNIIDEAQSLAKDGFKEIVLTGIHLGLYGRDFKDE 209

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
           NI  +LD I++   +     I +       +     +     K   +   + +QS  +  
Sbjct: 210 NIH-LLDVISRIADIEGIERIRLSSIEAMELTDEFLKSLCGIKKFCHHFHVPLQSGCDTV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R +   E    I   R + P  S   D+I   P +T  +++             L
Sbjct: 269 LRRMNRRYTTDEFRDRIDYIRQLMPDASITTDVIVGFPGETEEEFKQTENFIKEINFSRL 328

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++  +  KGTL   M    +
Sbjct: 329 HVFPFSPRKGTLADDMPNQIE 349


>gi|91790094|ref|YP_551046.1| radical SAM family protein [Polaromonas sp. JS666]
 gi|91699319|gb|ABE46148.1| Radical SAM [Polaromonas sp. JS666]
          Length = 536

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 23/236 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C  KC +C          + +  +       M  M  L       +  F     +  ++ 
Sbjct: 178 CPFKCEFC-------LSSLDKTAWAFDLDLFMAEMEALYRR---GARNFKFVDRTFNLKV 227

Query: 87  QNIALILDGIAKNWTVSS-------NVEITIEANPSSVEVNNFQGYR---KAGVNRISLG 136
           ++   IL         +        ++ +  E  P S+  +  +       AG  +  +G
Sbjct: 228 EHSVRILQFFLDRMKDADGRIQAAPDLFVHFEVVPDSL-PDRLKALIVQFPAGSLQFEVG 286

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +QS      + + R  +  +    +          +  DLI+ LP +T+  +     R  
Sbjct: 287 IQSFNPDVQQRISRKQDNVKTADNLRWLVGQSQAHVHADLIFGLPGETLESFAQGFDRLY 346

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             A   +    L   +GT   +   D  +    +     L N T    +   ++ +
Sbjct: 347 ELAPHEIQFGILKRLRGTPITRHTADFAMAYDPQTPYTILQNSTIDFATMQRINRF 402


>gi|73662313|ref|YP_301094.1| Fe-S oxidoreductase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494828|dbj|BAE18149.1| putative Fe-S oxidoreductase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 317

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 68/203 (33%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I     E++              +F   T +    + +  
Sbjct: 52  CTFCS-AAGSGDFAGNRVDPIDVQFKEIKDRMHEKWHDGQYIAYFQAFTNTHAPVEVLRE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             +   K   V   V ++I   P  +  +  +   +        + LG+Q++ +++   +
Sbjct: 111 KYETALKEPGV---VGLSIGTRPDCLPDDVVEYLAELNERTYLWVELGLQTIHQETSDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       I   R     +   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMKTYYEGIAKLRKHNINICTHIINGLPGEDYNMMMETAREVAQMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + KGT   K +  G L   S++ 
Sbjct: 228 LLKGTPMVKQYDKGMLEFMSQDE 250


>gi|225567940|ref|ZP_03776965.1| hypothetical protein CLOHYLEM_04013 [Clostridium hylemonae DSM
           15053]
 gi|225163228|gb|EEG75847.1| hypothetical protein CLOHYLEM_04013 [Clostridium hylemonae DSM
           15053]
          Length = 477

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ +  L        +  G        +L
Sbjct: 195 CNNFCSYC-----IVPYVRGRERS-RAPEAIIREIEHLVEDGVTEVMLLGQNVNSYGKTL 248

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  I K   +       + ++P  +     +    +      + L VQS  
Sbjct: 249 DTPVTFAALLKEIEKIEGLERIRF--MTSHPKDLSDELIEVMGSSHKICRHLHLPVQSGS 306

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R++   + +  +   R   P +S   D+I   P +T   ++  L        
Sbjct: 307 TDILKKMNRHYTKEQYLELVRKIREAVPGISLTTDIIVGFPGETEEDFQETLDVVRRVRY 366

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 367 DSAFTFIYSKRTGTPAAVM 385


>gi|330960147|gb|EGH60407.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 442

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFIYSPRPGTPAADLQDDTPEALKKERLAALQHRLNQQ 372


>gi|307825688|ref|ZP_07655905.1| MiaB-like tRNA modifying enzyme [Methylobacter tundripaludum SV96]
 gi|307733265|gb|EFO04125.1| MiaB-like tRNA modifying enzyme [Methylobacter tundripaludum SV96]
          Length = 429

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 80/219 (36%), Gaps = 12/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C                +Q+ + E+    RQ      ++ +  GG   S +  
Sbjct: 145 CRYRCTFC---IVTVARGEENSRPVQAVIDEINALHRQGITEVILTGVHLGGYG-SDLG- 199

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSL 145
            N++ ++  I     +      ++E  P  +  + F+ +     +  + L +QS  +  L
Sbjct: 200 NNLSDLIKAILAETDIPRLRLGSLE--PWELPGDFFKLFDNPRLMPHLHLPLQSGSDTVL 257

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R     E  + ++  R   P  +   D+I   P +T  +W+            H+ 
Sbjct: 258 RRMARRCKTEEFASIVNQLRAQIPNFNVTTDIIVGFPGETEQEWQESFNFIKQTGFGHIH 317

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++  +  +GT    +       +  +  +  L+ L + +
Sbjct: 318 IFTYSSREGTKAASLPGQLSNDI-KKQRSRQLHELAEEM 355


>gi|307354216|ref|YP_003895267.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307157449|gb|ADN36829.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
          Length = 379

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 20/175 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C  +C YC           H    ++ +        +++    +   P +++    G   
Sbjct: 149 CPFRCGYCQTPRLFGGCMRHRSVDEIVKA-------SKIYTDVRFLTPNALAYGSNGRE- 200

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQS 139
                P+ +  +L   +K+  V        E  P  +         K   N+ I  G QS
Sbjct: 201 ---FLPEKVEKLLSSFSKDQNV-YLGTFPSEVRPEFINDEAIDLIEKYCANKKIHFGAQS 256

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
             E+ L  L R H   + I A+ L          D I  +P +T       +++ 
Sbjct: 257 GSERVLSLLHRGHTCDDVIRAVELCHERGFAPVVDYIVGIPFETEEDQMATVEQM 311


>gi|197303393|ref|ZP_03168432.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC
           29176]
 gi|197297391|gb|EDY31952.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC
           29176]
          Length = 490

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C   C YC     +  Y  G+E      + + E++   +L     +  +  G    S   
Sbjct: 206 CNNFCSYC-----IVPYVRGRERSRDPKAIVREIE---RLVADGVVEVMLLGQNVNSYGK 257

Query: 84  -IE-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +E P   A +L  I K   +       + ++P  +     +   ++      + L VQS
Sbjct: 258 NLEHPMTFAQLLQEIEKIEGLERIRF--MTSHPKDLSDELIEVMSRSKKICRHLHLPVQS 315

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++     +  +   +   P +S   D+I   P +T   +   L      
Sbjct: 316 GSSRILKKMNRHYTKEHYLELVDKIKKAVPDISLTTDIIVGFPGETEEDFRETLDVVRKV 375

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 376 RYDSAFTFIYSKRTGTPAAVM 396


>gi|221134934|ref|ZP_03561237.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Glaciecola sp. HTCC2999]
          Length = 476

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTPSLI 84
           C  YC F              +   L E+  + +          +++++        S+ 
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPVDDVLLEVAQLAEQGVREVNLLGQNVNAFRGPHFDGSIC 216

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +  ++  I     +         ++P     +  + Y      V+ + L VQS  +
Sbjct: 217 RFAELLELIASIDGIDRIRYTT-----SHPVEFTDDIIEAYASIPELVDHLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   + I P +S   D I   P ++   +   ++       D
Sbjct: 272 RILNLMKRGHTAIEYKSKIRALKKIRPNLSMSSDFIIGFPGESEQDFADTMKLINDIEYD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
               +  +   GT    + 
Sbjct: 332 LSFSFIYSARPGTPAADLP 350


>gi|67459038|ref|YP_246662.1| MiaB-like tRNA modifying enzyme [Rickettsia felis URRWXCal2]
 gi|67004571|gb|AAY61497.1| MiaB-like tRNA modifying enzyme [Rickettsia felis URRWXCal2]
          Length = 421

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 84/234 (35%), Gaps = 21/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--------GG 79
           C   C +C            +   I + +++++ +  L G + +               G
Sbjct: 148 CDHFCTFC---IIPYGRGKSRSVPIGAIVSQVKHLV-LNGFKEVVFTGVDVTAYGSDLPG 203

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           +P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + +Q+
Sbjct: 204 SPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHISLQA 258

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +     
Sbjct: 259 GDDMILKRMKRRHNRANVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLISEA 318

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + +L ++  +  +GT   +M +    +   +  A  L    Q+  S       
Sbjct: 319 ELQYLHVFPYSEREGTPAARMPQVPKAIR--KERAEILRQEGQNQLSEFFKKHI 370


>gi|47568277|ref|ZP_00238980.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9241]
 gi|47555105|gb|EAL13453.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9241]
          Length = 509

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|331011329|gb|EGH91385.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 351

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 57  SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 114

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 115 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 173

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 174 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 233

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 234 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 281


>gi|29653907|ref|NP_819599.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           493]
 gi|153208814|ref|ZP_01947041.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU
           Goat Q177']
 gi|161830593|ref|YP_001596498.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii RSA 331]
 gi|165919097|ref|ZP_02219183.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           334]
 gi|212212941|ref|YP_002303877.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii CbuG_Q212]
 gi|212218810|ref|YP_002305597.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii CbuK_Q154]
 gi|81629338|sp|Q83DX3|MIAB_COXBU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890502|sp|B6J853|MIAB_COXB1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890503|sp|B6J1A4|MIAB_COXB2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890505|sp|A9NC58|MIAB_COXBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|29541170|gb|AAO90113.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii RSA 493]
 gi|120575720|gb|EAX32344.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU
           Goat Q177']
 gi|161762460|gb|ABX78102.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           331]
 gi|165917231|gb|EDR35835.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           334]
 gi|212011351|gb|ACJ18732.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuG_Q212]
 gi|212013072|gb|ACJ20452.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuK_Q154]
          Length = 439

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 16/204 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F                  + E+  + +  G R I+ +      + G    L+ 
Sbjct: 156 CSKYCTFCVVPYTRGEEISRPFDDVIAEVASLCEQ-GVREITLLGQNVNDYRG----LMH 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +A +   I     + +   I     +PS+   N    Y +     N + L VQS  +
Sbjct: 211 DGQVADLALLIHYLAAMDNIERIRFTTSHPSAFSENLIDAYAEEPKLANHLHLPVQSGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + RN+   E  + I   R + P +S   D I   P +T   +E  +        D
Sbjct: 271 RILAAMKRNYTVLEYKSKIRKLRAVRPDISLSSDFIIGFPGETDADFEATMNLIHDMGFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL 224
           H   +  +   GT   ++  D  +
Sbjct: 331 HSFSFIYSPRPGTPAAQLPDDVPM 354


>gi|119489699|ref|ZP_01622458.1| tRNA-i(6)A37 modification enzyme MiaB [Lyngbya sp. PCC 8106]
 gi|119454436|gb|EAW35585.1| tRNA-i(6)A37 modification enzyme MiaB [Lyngbya sp. PCC 8106]
          Length = 452

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          + Q    ++  +EM+ + +L G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGIEQSRTPEAIRSEMEELGRL-GYKEITLLGQNIDAYGRDLPG 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S  E ++   + D ++    V     +     +P        +   +         +  Q
Sbjct: 213 STPEGRHKHTLTDLLSFVHDVPGIERLRFATSHPRYFTERLIKACAELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + Q L+ + R +   +    I+  R   P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNQILKAMSRGYTHEKYRRIINTVREYMPDASISADAIVGFPGETEEQFENTLKLVDD 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDLLNTAAYSPRPGTP 350


>gi|310658156|ref|YP_003935877.1| iron-only hydrogenase maturation protein [Clostridium sticklandii
           DSM 519]
 gi|308824934|emb|CBH20972.1| Iron-only hydrogenase maturation protein [Clostridium sticklandii]
          Length = 348

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 16/193 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  + RY +  E  I++         ++       +    GG  + 
Sbjct: 61  YCKNDCTYCGISIHNKELTRYHMTPEEVIKT--------AEIGYSLGFRTFVMQGGEDTS 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                 A I+  I   +      E  +  +       ++Q    AG +R  +  +++ + 
Sbjct: 113 FTDDKFAAIISSIKTQFP-----EAAVTLSIGERSKESYQKLYDAGADRFLIRHETINKN 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L    +    I ++   ++I  ++    +  +P Q +     +L          + 
Sbjct: 168 LYEKLHPKMSYENRIKSLFDLKDIGFQVGTGFMVGVPGQEIEDIADDLLFIKELNPHMIG 227

Query: 204 LYQLTIEKGTLFY 216
           +      K T   
Sbjct: 228 IGPFIPHKNTPLR 240


>gi|218515353|ref|ZP_03512193.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli 8C-3]
          Length = 452

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLVE-AGVREITLLGQNVNAWHGAGPR 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++    + +R     +  + L VQS 
Sbjct: 222 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIEAHRDLRALMPYLHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E ++ I   R + P ++   D I   P +T   +E  L+      
Sbjct: 279 SDRILKAMNRRHTAAEYLSLIERIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVR 338

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 339 YAQAFSFKYSTRPGTP 354


>gi|119504409|ref|ZP_01626489.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [marine gamma proteobacterium HTCC2080]
 gi|119459917|gb|EAW41012.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [marine gamma proteobacterium HTCC2080]
          Length = 432

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 65/192 (33%), Gaps = 12/192 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLIEPQ 87
           C  YC F              +   + E+  +    G + ++ +         P+ +   
Sbjct: 144 CSKYCTFCVVPYTRGEEVSRPVDDIIAEIASLAG-GGVKEVNLLGQNVNAYRGPNHLGES 202

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A +L  +     +      T  ++P        Q Y      V+ + L VQS  +++
Sbjct: 203 VDFAELLHLVNLVSGIERIRYTT--SHPVEFSDALIQCYADIPALVDHLHLPVQSGSDRT 260

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E  A I   R I P +S   D I   P +    +   ++       DH 
Sbjct: 261 LMAMKRGHTALEYKAKIRALRRIRPNISLSSDFIIGFPGEDEKDFSATMKLIDDIGFDHS 320

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 321 FSFIYSARPGTP 332


>gi|319892815|ref|YP_004149690.1| Predicted Fe-S oxidoreductase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162511|gb|ADV06054.1| Predicted Fe-S oxidoreductase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464153|gb|ADX76306.1| radical SAM protein [Staphylococcus pseudintermedius ED99]
          Length = 317

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 68/206 (33%), Gaps = 7/206 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I+    E++              +F   T +      +  
Sbjct: 52  CTFCS-AAGSGDFAGNRADAIEVQFKEIKNKMHEKWHEGQYIAYFQAFTNTHAPVAVLRE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             +   K   V   V ++I   P  +  +      +        + LG+Q++ +++   +
Sbjct: 111 KFEAALKEPGV---VGLSIGTRPDCLPDDVVDYLAELNERTYLWVELGLQTIHQETSDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R    ++   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMDCYYEGVAKLRRHNIKVCSHIINGLPGEDYDMMIETAKAVAQMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVD 234
           + KGT   K +  G L   ++   + 
Sbjct: 228 LLKGTPMMKQYDKGLLEFMTKEQYIQ 253


>gi|94501476|ref|ZP_01307995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanobacter sp. RED65]
 gi|94426441|gb|EAT11430.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanobacter sp. RED65]
          Length = 425

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 78/220 (35%), Gaps = 10/220 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +     F        Q   Q     ++   ++    G     +
Sbjct: 135 CSKYCTFC--VVPYTRGEEVSRPFADVMREVEQLAAQGVREVNLLGQNVNAYQGQTDDGD 192

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A ++  +A+   +      T  ++P     +  Q Y +    V+ + L VQS   +
Sbjct: 193 IADLAELITAVAEVEGIDRIRFTT--SHPVEFSDSLIQVYAEVPELVSHLHLPVQSGSNR 250

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H     I  I+  + + P +S   D I   P +T   +E  +        D 
Sbjct: 251 ILSAMKRGHEIDMYIDKINRIKKLRPDISISSDFIIGFPGETDEDFEDTMNLIAEIGFDI 310

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              +  +   GT   ++  +    +  + +++    +TQ+
Sbjct: 311 SFSFIYSARPGTPASELKDETPEDVKKQRLSILQNRITQN 350


>gi|312127656|ref|YP_003992530.1| RNA modification enzyme, miab family [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777675|gb|ADQ07161.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 434

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 75/202 (37%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   ++S   E ++ +++      I+ I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRSLKSIEEEVIRLVQKGYKEFVITGINISSYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +     +         + + L +QS  ++
Sbjct: 206 DGKVTLIDVIERVNKIEGVKRIRLSSLEPVIMNDEFIERLLGFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++  ++    +   R  +  ++F  D+I   P +T   +   L+         
Sbjct: 266 ILKLMNRHYTTAKYQGIVDRIREKWEDVAFTTDIIVGFPGETEEDFNATLEFVQKIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ + +KGT  Y+M    D
Sbjct: 326 IHVFRFSPKKGTKAYEMPNQVD 347


>gi|303243818|ref|ZP_07330158.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
 gi|302485754|gb|EFL48678.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
          Length = 383

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 69/203 (33%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFG---G 78
           C  KC +C     F S VR   +          + ++ +   T  R IS  ++ +G   G
Sbjct: 164 CPYKCRFCQTPQIFGSKVRHRSID---------SILRLVNPNTDTRVISPNALCYGSKTG 214

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGV 137
             P++ + + +   L          +      E  P  +     +   K   N+ +  G 
Sbjct: 215 TKPNIEKLEKLLKKLSEGKGKLFFGT---FPSEVRPEFITKETVELIAKYCDNKFLHFGA 271

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS  ++ L+++ R H  ++ + A+ L  +       D I+  P +     +  ++     
Sbjct: 272 QSGNDEMLKYIRRGHTVNDVLNAVDLCIDYNLIPKVDFIFGFPNENEFHRKDSMELLYYI 331

Query: 198 --AVDHLSLYQLTIEKGTLFYKM 218
                    +      GT F   
Sbjct: 332 IKKNGRAHAHYFMPLPGTYFENQ 354


>gi|65321098|ref|ZP_00394057.1| COG0621: 2-methylthioadenine synthetase [Bacillus anthracis str.
           A2012]
          Length = 524

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 236 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 291

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 292 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 347

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 348 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 407

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 408 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 457


>gi|313886493|ref|ZP_07820209.1| ribosomal protein S12 methylthiotransferase RimO [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924039|gb|EFR34832.1| ribosomal protein S12 methylthiotransferase RimO [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 443

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 10/220 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC       R+     E  ++     +    +     +  S ++G     L + 
Sbjct: 152 CDRTCSYCAIPLITGRHHSRPMEEIVREIEKRVATGCREFQIIAQDSTYYGVD---LYQE 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q IA +LD +A+   V         A P+   +       K       + L +Q      
Sbjct: 209 QAIATLLDRLAQVEGVHWLRLHY--AYPNHFPLELLDVMAKHDNICKYLDLALQHSSNHM 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R     E I  +   R   P ++    ++   P +T   +   L        + L
Sbjct: 267 LQLMRRQITREETIVLLERIRKQVPGIALRTTMMVGHPGETDEDFADLLDFVSQMRFERL 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             +Q + E+GT  YK ++D       +     L +L ++I
Sbjct: 327 GAFQYSHEEGTYAYKHYQDDVPPEVKQERYDALMSLQETI 366


>gi|257877005|ref|ZP_05656658.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257811171|gb|EEV39991.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 327

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 10/203 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           +    + F  E+  M +         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPEAPLPEQFEKEIAMMHKKWPQVDKYIVYFQNFTNTHAPVAVIRE 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +    T+   V I+I   P  +  +      +        + LG+Q+  E +   +
Sbjct: 112 RFEQV---LTLPGVVGISIGTRPDCLPEDVVDYLAELNQRFYLWVELGLQTTFETTSNAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T+   +  ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVASLRKHNIRVCTHLINGLPGETIEMMQENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            + + T   + + +G L L   +
Sbjct: 229 HLMRNTRMLRDYHEGRLQLMRRD 251


>gi|167765542|ref|ZP_02437606.1| hypothetical protein CLOSS21_00036 [Clostridium sp. SS2/1]
 gi|167712727|gb|EDS23306.1| hypothetical protein CLOSS21_00036 [Clostridium sp. SS2/1]
          Length = 497

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ ++Q+        +  G        +L
Sbjct: 214 CNNFCSYC-----IVPYVRGRERS-RKPEDIIKEVKQVVSEGVKEVMLLGQNVNSYGKTL 267

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  + K   +       +  +P  +  +  +    +      + L +QS  
Sbjct: 268 EEPMSFAELLREVEKVEGLERIRF--MTPHPKDLSDDLIEVMATSKKVCKHMHLPMQSGS 325

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++   + +A     +   P +SF  D+I   P +T   ++  L        
Sbjct: 326 SRLLKLMNRHYTKEQYVALAKKIQERIPGVSFTTDIIVGFPGETEEDFKETLDVVREVGF 385

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    Y  +   GT    M    D
Sbjct: 386 DSAYTYVYSKRSGTPAASMEDQVD 409


>gi|302037647|ref|YP_003797969.1| hypothetical protein NIDE2331 [Candidatus Nitrospira defluvii]
 gi|300605711|emb|CBK42044.1| conserved protein of unknown function, Fe-S oxidoreductase
           [Candidatus Nitrospira defluvii]
          Length = 496

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 3/167 (1%)

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL--GRNHNASEAIAAIHLARNIFP 169
           A   +V+        +AG   + LG++S  +     +  GR     + +A +   R+   
Sbjct: 295 ARVDTVQDEVLAKLARAGFTWLGLGIESGSQHVRDGVEKGRF-GERDIVATVDKIRSYGI 353

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ + I+ LP  TM      L  AL+   +  + Y      G+  Y   K     LP +
Sbjct: 354 HVAANYIFGLPDDTMESMRATLDLALTLNTEWANFYCAMAYPGSPLYTQAKQKQWALPDD 413

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
                     Q       L    ++    L       + Y+ +  Y+
Sbjct: 414 QGGPGWIGYAQHAYDCRPLPTDHLTATQVLAFRDRAFIEYFTHPQYL 460


>gi|297616776|ref|YP_003701935.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297144613|gb|ADI01370.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 292

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 81/219 (36%), Gaps = 14/219 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   S+  + K  +   ++   T+++  +   G   +  +F   G    ++  ++  
Sbjct: 30  CTFCG--SY--KGKKYRVRSLEEIKTDIRMAKIFYGN--VRKVFLADGDAMAMDTPDLLE 83

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +L+ +    T  S   + I A P S+     +  +  R AG+    LGV++ +E+ L+ +
Sbjct: 84  VLEFLYS--TFPSLYHVGIYAGPQSILRKSKDELRALRDAGLTIAYLGVETGDEELLQEI 141

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM---TQWEMELQRALSYAVDHLSLY 205
            +     E +           ++S  ++  L               +       D+L+  
Sbjct: 142 NKGVTYDEMVEVGKRIVEAKIKLSVTVLLGLAGSGERAHAHAAGTARICNEIKPDYLAAL 201

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            L I  GT+ +K  + G+  + S    +    +      
Sbjct: 202 TLIIVPGTVLHKKVQAGEFKVASPMDIIKEMRILIEGLE 240


>gi|260464162|ref|ZP_05812355.1| MiaB-like tRNA modifying enzyme [Mesorhizobium opportunistum
           WSM2075]
 gi|259029965|gb|EEW31248.1| MiaB-like tRNA modifying enzyme [Mesorhizobium opportunistum
           WSM2075]
          Length = 446

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      ++ +++L G      +  G    S    +
Sbjct: 169 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADL 222

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I +       + ++   +    +             +  + L +QS +
Sbjct: 223 PGAPKLGKLVKTILRQVPDVKRLRLS-SIDSIEADDELLDAIANEPRLMPHLHLSLQSGD 281

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   ++I      R + P + F  D+I   P +T   +E  +       +
Sbjct: 282 DMILKRMKRRHLRDQSIRFCEDVRKLRPAIVFGADIIAGFPTETDDMFENSINIVAECGL 341

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +  +GT   +M +
Sbjct: 342 THLHVFPFSPREGTPAARMPQ 362


>gi|225374900|ref|ZP_03752121.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM
           16841]
 gi|225213283|gb|EEG95637.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM
           16841]
          Length = 480

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 20/222 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC    +VR  +  +E   +  + E++    L     +  +  G    S    +
Sbjct: 199 CNNFCSYC-IVPYVRGRERSREP--KEIVREIE---HLVQDGVVEVMLLGQNVNSYGRNL 252

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I K   +       + ++P  +     +  + +    N + L +QS  
Sbjct: 253 EHPMTFAQLLQEIEKIEGLERIRF--MTSHPKDLSDELIEVMKNSKKICNHLHLPLQSGS 310

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++    +  +   R   P ++   D+I   P +T   +E  +        
Sbjct: 311 SRILKIMNRHYDKEHYLELVDKIRAAVPDIALTTDIIVGFPGETEEDFEETMDVVRRVRY 370

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           D    +  +   GT    M    D  +P E +      L   
Sbjct: 371 DSAFTFIYSKRTGTPAATM----DDQIPEEVIKERFDRLLHE 408


>gi|156937874|ref|YP_001435670.1| radical SAM domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566858|gb|ABU82263.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 351

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 63/178 (35%), Gaps = 13/178 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV +CP C F     + K  +  +  S    ++   +     +      GG  P  +  +
Sbjct: 54  CVYRCPLCAFY----KEKGEEGAYFLSVEEMLKQAAEAVWLGATELHVVGGIIPE-LTVE 108

Query: 88  NIALILDGIAKNWTVSS-----NVEITIEANPSSVE-VNNFQGYRKAGVNRI-SLGVQSL 140
                   + + W   +       E++  A  + +      +  ++AG++ +   G + L
Sbjct: 109 YFEKFFSEVKRRWPFLTIKALTATEVSYLARINRMSVKEVLERLKEAGLDAMPGGGAEVL 168

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++ L+ +    +A E +  I  A  +  R +  ++Y    +        L R     
Sbjct: 169 DDEVLKVIAPAKSAEEWLRTIETAHELGIRTNATMLYGHV-ERPEHIIRHLMRIRELQ 225


>gi|332652498|ref|ZP_08418243.1| 2-methylthioadenine synthetase [Ruminococcaceae bacterium D16]
 gi|332517644|gb|EGJ47247.1| 2-methylthioadenine synthetase [Ruminococcaceae bacterium D16]
          Length = 430

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 37/211 (17%)

Query: 28  CVKKCPYC---------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           CV  C YC               D  +  +   + +  + +  LT ++        + + 
Sbjct: 151 CVNFCSYCIIPYARGRIRSLPLADCAAQAKS--LVEAGYQEIVLTGIEISS---WGQDLE 205

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ--GYRKAGV 130
                 G PSLI+   +  I   +  +  V           P ++  +  +     +   
Sbjct: 206 ------GKPSLIDA--VEAICQAVPSHIRVRLG-----SLEPRTITEDFCRRCAALENLC 252

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE 188
               L +QS  +  L  + R +++S    ++     ++ R  ++ DLI   P +T  +++
Sbjct: 253 PHFHLSMQSGCDTVLARMNRKYDSSRYYESVQFLHEVYDRPAITTDLIVGFPGETEDEFQ 312

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             L          + ++  +   GT   KM 
Sbjct: 313 QTLDFIQKCGFAAMHIFPYSRRPGTPAAKMP 343


>gi|291454555|ref|ZP_06593945.1| RNA modification enzyme [Streptomyces albus J1074]
 gi|291357504|gb|EFE84406.1| RNA modification enzyme [Streptomyces albus J1074]
          Length = 505

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 70/222 (31%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 171 ESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFC--IVPALRGKEKDRRTGDILAEVEA 228

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + Q  + +L    K   +          +P     +
Sbjct: 229 LVAEGVSEITLLGQNVNAYGSDIGDRQAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 286

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     ++ I   R   P   ++ D+I
Sbjct: 287 VIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSYRQERFLSIIEKVRAAIPDAAITTDII 346

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   ++  L             +Q +   GT   +M
Sbjct: 347 VGFPGETEEDFQQTLHTVREARFAQAFTFQYSKRPGTPAAEM 388


>gi|239982707|ref|ZP_04705231.1| hypothetical protein SalbJ_24974 [Streptomyces albus J1074]
          Length = 480

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 70/222 (31%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 146 ESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFC--IVPALRGKEKDRRTGDILAEVEA 203

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + Q  + +L    K   +          +P     +
Sbjct: 204 LVAEGVSEITLLGQNVNAYGSDIGDRQAFSKLLRACGKIEGLERVRF--TSPHPRDFTDD 261

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     ++ I   R   P   ++ D+I
Sbjct: 262 VIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSYRQERFLSIIEKVRAAIPDAAITTDII 321

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   ++  L             +Q +   GT   +M
Sbjct: 322 VGFPGETEEDFQQTLHTVREARFAQAFTFQYSKRPGTPAAEM 363


>gi|39996252|ref|NP_952203.1| oxidative cyclase-related protein [Geobacter sulfurreducens PCA]
 gi|39983132|gb|AAR34526.1| oxidative cyclase-related protein [Geobacter sulfurreducens PCA]
 gi|298505265|gb|ADI83988.1| oxidative cyclase-related protein [Geobacter sulfurreducens KN400]
          Length = 475

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 22/197 (11%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  KC YC     F+    R +  Q  +  ++  +  +  MR+L+      +        
Sbjct: 206 CPSKCIYCLWPQTFSGRAMRTRSPQNVYEEVKWIVDNIPEMRELSFDDDTFTADRRHAR- 264

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                       +  AK   +  +  I   AN         +  R+AG+  + +G ++  
Sbjct: 265 ------------EVAAKLKPLGISWTINARANCDY---ETLKIMREAGLRHVVVGYETGN 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           EQ L+ + +     +AI      + +   +    I  LP +T       ++ A +  ++ 
Sbjct: 310 EQILKNIKKGVTKEQAIEFTRNCKKLGLSVHGAFIMGLPGETRDTIRETIEFAKALDLNS 369

Query: 202 LSLYQLTIEKGTLFYKM 218
           +     +   GT F+ +
Sbjct: 370 IQASLASPYPGTEFWDL 386


>gi|86148579|ref|ZP_01066864.1| tRNA 2-methylthioadenosine synthase [Vibrio sp. MED222]
 gi|85833645|gb|EAQ51818.1| tRNA 2-methylthioadenosine synthase [Vibrio sp. MED222]
          Length = 474

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 85/251 (33%), Gaps = 23/251 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+    ++    YV     C K C YC       R +              Q   Q  G
Sbjct: 137 DNLPEPKADGATAYVSIMEGCSKYCTYC--VVPYTRGEEVSRPMDDVLFEVAQLAEQ--G 192

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN 121
            R ++ +      F G  P+     +I    + +    ++     I     +P     + 
Sbjct: 193 VREVNLLGQNVNAFRG--PT--HEGDICTFAELLRLVASIDGIDRIRFTTSHPLEFGDDI 248

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            + Y+     V+ + L VQS  ++ L  + R H A E  + I   R   P +  S D I 
Sbjct: 249 IEVYKDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIV 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   ++  ++       D    +  +   GT       D    +P++     LY 
Sbjct: 309 GFPGESKQDFQDTMKLIKEVDFDMSFSFVFSPRPGTPAA----DYPCDVPAQEKKDRLYE 364

Query: 238 LTQSITSAHGL 248
           L Q++ +    
Sbjct: 365 LQQTVNTQAMR 375


>gi|99080026|ref|YP_612180.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040]
 gi|123077818|sp|Q1GK98|MIAB_SILST RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|99036306|gb|ABF62918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040]
          Length = 440

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 21/202 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              +   L E + + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPVDRVLREAEDLVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  -LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG---YRKAGVNRISLGVQ 138
             +    +   LD I     +         ++P+ +  +  +     +K  +  + L VQ
Sbjct: 215 GDMTLAQLIWELDKIDGLERIR-----FTTSHPNDMMDDLIEAHGTCKKL-MPYLHLPVQ 268

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           +  ++ L+ + R+H A   I  I   R   P   +S D I   P++T   ++  L     
Sbjct: 269 AGSDKILKRMNRSHTAESYIRLIERIRAARPDILISGDFIVGFPEETEEDFQATLDLVEE 328

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
                   ++ +   GT   + 
Sbjct: 329 VKYGTAYSFKYSTRPGTPAAER 350


>gi|328472484|gb|EGF43347.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           parahaemolyticus 10329]
          Length = 474

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q+I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDIPEQVKKERLYELQQTINAQAMRYS 377


>gi|220920281|ref|YP_002495582.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Methylobacterium nodulans ORS 2060]
 gi|219944887|gb|ACL55279.1| RNA modification enzyme, MiaB family [Methylobacterium nodulans ORS
           2060]
          Length = 447

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              +   L E + +    G R ++ I      + G  P 
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRPVAKVLAEAERLAA-GGARELTLIGQNVNAYHGEGPD 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQS 
Sbjct: 213 GATWS-LGRLLRRLAEVPGIARLRYTT--SHPRDMDDDLIAAHRDCPALMPYLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H+A   +  I   R   P +  S D I   P +T       ++      
Sbjct: 270 SDRVLAAMNRKHDAETYLRLIDRIRTARPDIALSSDFIVGFPGETDADHAATMRLVAEVG 329

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 330 FASAFSFKYSPRPGTP 345


>gi|153864929|ref|ZP_01997651.1| tRNA-i(6)A37 modification enzyme MiaB [Beggiatoa sp. SS]
 gi|152145575|gb|EDN72348.1| tRNA-i(6)A37 modification enzyme MiaB [Beggiatoa sp. SS]
          Length = 304

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 32  C-PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIE 85
           C  YC F                  + E+ ++    G R ++ +      + G       
Sbjct: 19  CSHYCTFCVVPYTRGEEVSRPFDDVIAEVAFLADQ-GVREVTLLGQNVNGYRGHK----A 73

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +IA +   I     +     I     +P  +  N  Q Y +    V+ + L VQS  +
Sbjct: 74  EGDIADLALLITYIAAIDGIERIRYTTSHPLELSENLIQVYAEVPKLVSHLHLPVQSGSD 133

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E    +    A      +S D I   P +T   ++  +Q       D
Sbjct: 134 RILSLMKRGHTALEYKQKVRKLRAVRPDLSLSSDFIIGFPGETEADFQATMQLIEEIGFD 193

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           H   +  +   GT    +  D  + L  + +A     +T+
Sbjct: 194 HSFSFIYSPRPGTPAASLPDDVPIALKKQRLAQLQARITE 233


>gi|126727809|ref|ZP_01743639.1| MiaB-like tRNA modifying enzyme [Rhodobacterales bacterium
           HTCC2150]
 gi|126702936|gb|EBA02039.1| MiaB-like tRNA modifying enzyme [Rhodobacterales bacterium
           HTCC2150]
          Length = 422

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 81/205 (39%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  +  G    + + +  ++ +++L G      +  G    S    +
Sbjct: 149 CDHRCTFC-----IIPFGRGNSRSVAAGV-VVEQIKRLVGKGFNEIVLTGVDLTSWGADL 202

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
             +      +  IL  +     +  +   +IE     V+ N  Q     K  +  + L +
Sbjct: 203 PGEPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLLQAIATEKRLMPHLHLSL 257

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   +AI     A+ + P M+F  D+I   P +T   +E  L    
Sbjct: 258 QAGDDMILKRMKRRHLRDDAIEFCETAKKLRPDMTFGADIIAGFPTETEAMFENSLAMVA 317

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              +  L ++  ++ +GT   +M +
Sbjct: 318 DCDLTWLHVFPYSVRQGTPAARMPQ 342


>gi|88705750|ref|ZP_01103460.1| Protein of unknown function, UPF0004 [Congregibacter litoralis
           KT71]
 gi|88700263|gb|EAQ97372.1| Protein of unknown function, UPF0004 [Congregibacter litoralis
           KT71]
          Length = 433

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 18/195 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ--- 87
           C  YC F              +      +  +  L G R +  +   G   +    +   
Sbjct: 144 CSKYCSFCVVPYTRGEEVSRPLD---DVIAEVASLAG-RGVREVNLLGQNVNAYRGESHE 199

Query: 88  ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               + A +L  +A    +      T  ++P        Q Y      V+ + L VQ+  
Sbjct: 200 GDIVDFAELLHFVAAIPGIDRIRYTT--SHPVEFSEALIQAYADIPELVDHLHLPVQAGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R I P +S   D I   P +T   +   ++       
Sbjct: 258 DRVLANMKRGHTVLEYKSKIRKLRAIRPNISLSSDFIIGFPGETEADFAATMKLIDDIGF 317

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 318 DMSFSFIYSARPGTP 332


>gi|163752490|ref|ZP_02159679.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella benthica KT99]
 gi|161327634|gb|EDP98829.1| tRNA-i(6)A37 modification enzyme MiaB [Shewanella benthica KT99]
          Length = 461

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 16/225 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   + E+  + +  G R ++ +      F G T     
Sbjct: 144 CSKYCSFCVVPYTRGEEVSRPVDDVILEVAQLAEQ-GVREVNLLGQNVNAFRGAT----H 198

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     +     +P     +    Y      V+ + L VQS  +
Sbjct: 199 DDDICTFAELLRYIAAIDGIDRVRFTTSHPIEFSQDIIDVYEDTPELVSFVHLPVQSGSD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R H A E  + I   R   P +  S D I   P ++   +   ++     A D
Sbjct: 259 HILTQMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGESKQDFADTMKLIEDVAFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           H   +  +   GT    +  D  L    E +A+    +TQ     
Sbjct: 319 HSFSFIYSARPGTPAADLPDDVTLAEKKERLAILQERITQQAMRY 363


>gi|167648821|ref|YP_001686484.1| MiaB-like tRNA modifying enzyme [Caulobacter sp. K31]
 gi|167351251|gb|ABZ73986.1| MiaB-like tRNA modifying enzyme [Caulobacter sp. K31]
          Length = 449

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 21/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFG---GGT 80
           C  +C +C            +       + +++ +        + +      +G    G 
Sbjct: 169 CDHRCTFC---IIPFGRGNSRSAPAGEVVEQVRRLSAEGYNEVVLTGVDVTSWGTDLPGQ 225

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ-GYRKAGVNRISLGVQS 139
           P+L   Q +  IL  +     +  +     E +P  +     +   R      +SL  Q+
Sbjct: 226 PTL--GQLVGRILKLVPDLPRLRLSSIDAAEIDPDLL--KLLETELRLMPYLHLSL--QA 279

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R HN ++A+  +   R + P      DLI   P ++   +E  L+     
Sbjct: 280 GDDMILKRMKRRHNRADALKLVAEVRRVRPDTAFGADLIAGFPTESEGAFENTLKLVEEA 339

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +  L ++  +   GT   +M      V+  ++ A  L    Q+    H    
Sbjct: 340 GLAFLHVFPYSARPGTPAARMPPVKGGVI--KDRARRLREAGQAGLERHLQRQ 390


>gi|296157337|ref|ZP_06840173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
 gi|295892673|gb|EFG72455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
          Length = 457

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  +L
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGGLTL 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMTLVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 KYDTSFSFIYSPRPGTPAANLH 352


>gi|255524018|ref|ZP_05390980.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|296186875|ref|ZP_06855276.1| radical SAM protein, TIGR01212 family [Clostridium carboxidivorans
           P7]
 gi|255512305|gb|EET88583.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|296048589|gb|EFG88022.1| radical SAM protein, TIGR01212 family [Clostridium carboxidivorans
           P7]
          Length = 313

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 32  CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C +C      DF         G   F I+    +++ +            +F   T +  
Sbjct: 46  CVFCSERGSGDF--------AGNRRFSIKHQFQDIKQIMSKKWKNGKYIAYFQAYTNTYA 97

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLE 141
             + +    +   +       V + I   P  +         +        + LG+Q+  
Sbjct: 98  PVEVLK---EKYNEAINEEDVVGLAIATRPDCLSEEVLDLLEEFNKKIYTWVELGLQTSN 154

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           E +   + R +  +    AI   R     +   +I+ LP +T       ++   +  +  
Sbjct: 155 ENTASKINRGYKLNVFEEAIRNLRKRNIDVVTHVIFGLPGETSKDMLNTVKYVCAQDIQG 214

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           +  + L + K T    ++  G+L       
Sbjct: 215 VKYHLLHLMKNTPLEDLYNRGELRFLEYEE 244


>gi|49473881|ref|YP_031923.1| hypothetical protein BQ02140 [Bartonella quintana str. Toulouse]
 gi|81647252|sp|Q6G0N1|MIAB_BARQU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|49239384|emb|CAF25717.1| hypothetical protein BQ02140 [Bartonella quintana str. Toulouse]
          Length = 458

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C                ++    E + + +  G + I+ +             
Sbjct: 175 CDKFCTFC---VVPYTRGAEISRSVEQITEEARQLIE-AGVKEITLLGQNVNG----WHG 226

Query: 88  NI-----ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQS 139
            I       + D +     +     +     +P  ++ +    +R   +    + L VQS
Sbjct: 227 QIANGKTWRLGDLLYHLAKLDGLKRLRYTTSHPRDMDDSLIAAHRDLDILMPYLHLPVQS 286

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H +   +  I   R   P ++F  D I   P +T   +E  ++     
Sbjct: 287 GSDRILKAMNRQHKSIHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETVKLIKQV 346

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  ++ +   GT+   M    D
Sbjct: 347 QYSSAYSFKYSPRPGTVGATMKNHVD 372


>gi|28897507|ref|NP_797112.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260363858|ref|ZP_05776610.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           K5030]
 gi|260898985|ref|ZP_05907426.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           Peru-466]
 gi|260900745|ref|ZP_05909140.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           AQ4037]
 gi|81728328|sp|Q87RP4|MIAB_VIBPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|28805719|dbj|BAC58996.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087476|gb|EFO37171.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           Peru-466]
 gi|308108999|gb|EFO46539.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           AQ4037]
 gi|308114637|gb|EFO52177.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           K5030]
          Length = 474

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q+I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDIPEQVKKERLYELQQTINAQAMRYS 377


>gi|254251467|ref|ZP_04944785.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
 gi|124894076|gb|EAY67956.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
          Length = 457

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S DLI   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETDDDFDKMMALVHDM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 RYDTSFSFIYSPRPGTPAANLH 352


>gi|228986916|ref|ZP_04147043.1| hypothetical protein bthur0001_35910 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229157351|ref|ZP_04285429.1| hypothetical protein bcere0010_35340 [Bacillus cereus ATCC 4342]
 gi|228626078|gb|EEK82827.1| hypothetical protein bcere0010_35340 [Bacillus cereus ATCC 4342]
 gi|228772865|gb|EEM21304.1| hypothetical protein bthur0001_35910 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 509

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 442


>gi|297588418|ref|ZP_06947061.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Finegoldia magna ATCC
           53516]
 gi|297573791|gb|EFH92512.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Finegoldia magna ATCC
           53516]
          Length = 461

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 67/230 (29%), Gaps = 18/230 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            Q   ++S L+E+ + + Q     ++          +L +P
Sbjct: 179 CNNFCTYC---IVPYARGREQSRSVESILSEVKRMVDQGYKDITLLGQNVNSYGKTLEKP 235

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                +L  +     +       + ++P  +     +   K       I L  Q+     
Sbjct: 236 VTFTELLTKVNDVEGLERLRF--LTSHPKDISDELIEAMGKLDKVCENIHLPFQAGSNSV 293

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +     +  +   +        S D+I   P +T   ++  L        +  
Sbjct: 294 LERMHRRYTKESYLEKVEKLKKSVKGITFSTDIIVGFPGETEEDFQDTLDVVRKVGYEQA 353

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++     GT         DL     +  V    L + +        YE
Sbjct: 354 FTFKYNRRPGT-------KADLFEDQVDEDVKQDRL-ERLLDVAYPIFYE 395


>gi|261343533|ref|ZP_05971178.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Providencia rustigianii
           DSM 4541]
 gi|282568682|gb|EFB74217.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Providencia rustigianii
           DSM 4541]
          Length = 476

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGATF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +    ++     +     +P     +  + YR     V+ + L VQS
Sbjct: 214 ---DGEICSFAELLRLVASIDGIDRVRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I   R       +S D I   P +T   +E  ++     
Sbjct: 271 GSDRILTMMKRAHTALEYKAIIRKLREARPGILISSDFIVGFPGETTEDFEKTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D    +  +   GT    +  D       + + +    + Q   S 
Sbjct: 331 NFDMSYSFVYSARPGTPAADLPDDVTEDEKKQRLYLLQQRINQQAMSF 378


>gi|217076998|ref|YP_002334714.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B]
 gi|217036851|gb|ACJ75373.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B]
          Length = 429

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 84/258 (32%), Gaps = 22/258 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC       R    +   +   +   ++ + +      I+ +  G         
Sbjct: 147 CTNTCSYCA--IRFARGNKIRSKPVDLVVSEVLRLVNKDYKEIVITGLNLGK-----FGK 199

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
              + + + +     +  +  I +   NP  ++          +   N + + +QS    
Sbjct: 200 DIDSSLHELLRSLVKIKGDFRIRLSSINPEDLDEELISLIGAEEKICNHLHIPLQSGSTD 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + RN+   + +  +   R + P  S   D++   P ++   +E  L+         
Sbjct: 260 VLKNMRRNYTQDDYLRVVDSIRKVDPNFSITTDIMVGFPGESEKDFEETLKVVREVLFSK 319

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE---ISNHSF 258
           +  ++ +    TL  KM K     +  E V V          SA     Y    +   + 
Sbjct: 320 VHAFRYSDRPNTLASKMPKKVPGNVKKERVEVL------EKLSAAVAKDYRKRLVGRKAK 373

Query: 259 LGAESLHNLNYWRYGDYI 276
           +  ES  N  Y  Y +Y 
Sbjct: 374 VLIESYKNKIYSGYDEYY 391


>gi|254468961|ref|ZP_05082367.1| Fe-S oxidoreductase [beta proteobacterium KB13]
 gi|207087771|gb|EDZ65054.1| Fe-S oxidoreductase [beta proteobacterium KB13]
          Length = 508

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 14/249 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C + CDF       +   ++ I +     M++       R +  +   G     +  +  
Sbjct: 232 CSFGCDFCMINIINRNNNDDGISAADSRGMRFWSPDWVMREMEKLSNLGVETLRLSDEMF 291

Query: 90  ALILDGIAKNWTVSSNVEITIEAN------PSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              L+       +   V+   + N        SV  +    ++KAGVN ++LGV++  + 
Sbjct: 292 F--LNKKFYEPILQGIVDRGFKFNMWAYSRIDSVRKDYLDLFKKAGVNWLALGVEAGNQN 349

Query: 144 SLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + + +       I  +    +N    +  + I+  P+ T    +  L  AL    +  
Sbjct: 350 VRQEVSKGSFKEVNIRDVSKTIQNSDINIISNYIFGFPEDTFDTMQETLDLALELNTEMA 409

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           ++Y      G+  Y+     +  LP         +          L + E+       A 
Sbjct: 410 NMYPCQALPGSPMYQKALQNNWKLPDSYEGYAFLSYESEPLPTKYLSSAEVLKF-RDDAW 468

Query: 263 SLH--NLNY 269
           + +  N NY
Sbjct: 469 NQYFTNPNY 477


>gi|15807908|ref|NP_285567.1| hypothetical protein DR_A0244 [Deinococcus radiodurans R1]
 gi|6460688|gb|AAF12393.1|AE001863_18 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 355

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 11/222 (4%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFGGGTPSLIEPQN 88
           +C +C F     R +        +F   +Q + +L G   R   SIF   G   ++  + 
Sbjct: 123 RCTFCTFY----RDRPFSVQAPDAFAAHLQAVAELLGEGARLRRSIFLADGNALMLSNRK 178

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  ++      +              S   V +++  R AGV R+ LG+++  +  L +L
Sbjct: 179 LLPLIAQARAAFPGREVHGFLDVFTGSRKTVADWRELRGAGVRRVYLGLETGHDPLLAWL 238

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLSLYQ 206
            +  +A++A   IH  +     ++   +  +  QT         L+      +    L  
Sbjct: 239 DKPGSAAQATELIHDLKAAGLNVAPIFMTGVGGQTYAAAHLADTLRLLERLPLSTGDLVY 298

Query: 207 LT--IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           L+  +E G    +  + G L L           L +     H
Sbjct: 299 LSPFVEHGDYAARAREHGVLPLTITEREAQAAAL-REFLKTH 339


>gi|39934738|ref|NP_947014.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris CGA009]
 gi|192290260|ref|YP_001990865.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris TIE-1]
 gi|39648588|emb|CAE27109.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Rhodopseudomonas palustris CGA009]
 gi|192284009|gb|ACF00390.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris TIE-1]
          Length = 565

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 14/199 (7%)

Query: 25  WP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P     C   C +C       ++K  ++  ++     +  +++L     +         
Sbjct: 201 IPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIQELVEKYDVGFFILADEE 254

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P++   + I    + IA+   ++  V+  I    + +  +    + Y +AG+  +SLG +
Sbjct: 255 PTINRKKFIQFCEELIAR--GLNKKVQWGINTRVTDILRDEQLLKFYNEAGLMHVSLGTE 312

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +  L    +    S+   AI L R     +    I  L  +T    E   + A+ + 
Sbjct: 313 AAAQLKLDLFNKETKISDNKKAIRLLREAGIVVEAQFIVGLDSETPETLEETYRMAMDWK 372

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D  +    T    T  +K
Sbjct: 373 PDLANWSMYTPWPFTPLFK 391


>gi|85708149|ref|ZP_01039215.1| hypothetical protein NAP1_02900 [Erythrobacter sp. NAP1]
 gi|85689683|gb|EAQ29686.1| hypothetical protein NAP1_02900 [Erythrobacter sp. NAP1]
          Length = 391

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 76/227 (33%), Gaps = 18/227 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C   C +C      +     +   I   L E++    L    ++ +      +G   P  
Sbjct: 122 CDHACTFC---VIPQGRGKSRSMTIAEVLREVEHHLDLGAKEAVLTGVDVTSWGHDLPDT 178

Query: 84  IEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                +   +L+       +  +    IE     ++   F+ +   K  +  + L +Q  
Sbjct: 179 PPLGALVGAVLNEFPNLPRLRMSSLDGIE-----IDEALFELFASEKRLMPHLHLSLQHG 233

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H+ ++A+  +   +   P ++   DLI   P ++       L       
Sbjct: 234 HDLILKRMKRRHSRADAVDLVARIKQRRPEIAIGADLIAGFPTESDEHHAANLSIIDELD 293

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           + H  ++  +   GT   +M +  D  +     A     + +   + 
Sbjct: 294 IVHGHIFPYSPRPGTPAARMPQ-VDRRIVKARAAELRERVAERRAAW 339


>gi|192288683|ref|YP_001989288.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris TIE-1]
 gi|192282432|gb|ACE98812.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris TIE-1]
          Length = 423

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + + +++ + +      + +      +G   P  
Sbjct: 154 CDHRCTFC---IIPYGRGNSRSVPVGAVVEQVRLLAERGHAEIVLTGVDLTSYGADLP-- 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  + ++      + I+   +    + +           +  + L +Q+ +
Sbjct: 209 -GAPKLGTLVKKVLRHVPELQRLRIS-SIDQVEADRDLIDALATEPRLMPHLHLSLQAGD 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H  ++AIA     R   P +    DLI   P +T   ++  L       +
Sbjct: 267 DLILKRMKRRHARADAIAFCAEVRRRRPDIALGADLIAGFPTETEEMFQRSLDLVEECGL 326

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   +M +
Sbjct: 327 TFLHVFPYSPRPGTPAARMPQ 347


>gi|16080100|ref|NP_390926.1| Fe-S oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310988|ref|ZP_03592835.1| hypothetical protein Bsubs1_16596 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315315|ref|ZP_03597120.1| hypothetical protein BsubsN3_16502 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320232|ref|ZP_03601526.1| hypothetical protein BsubsJ_16423 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324514|ref|ZP_03605808.1| hypothetical protein BsubsS_16572 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81637633|sp|O35008|YTQA_BACSU RecName: Full=Putative protein ytqA
 gi|2293302|gb|AAC00380.1| YtqA [Bacillus subtilis]
 gi|2635532|emb|CAB15026.1| putative Fe-S oxidoreductase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291485486|dbj|BAI86561.1| hypothetical protein BSNT_04440 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 322

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 70/205 (34%), Gaps = 13/205 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C +C              N     +T+   ++              +F   T +    + 
Sbjct: 54  CTFCS----AAGSGDFAGNRTDDLITQFHDIKNRMHEKWKDGKYIAYFQAFTNTHAPVEV 109

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    + +     +   V I+I   P  +  +      +        + LG+Q++ E++ 
Sbjct: 110 LREKFESV---LALDDVVGISIATRPDCLPDDVVDYLAELNERTYLWVELGLQTVHERTA 166

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+ +  +  ++  R    R+   +I  LP +         +      V  + ++
Sbjct: 167 LLINRAHDFNCYVEGVNKLRKHGIRVCSHIINGLPLEDRDMMMETAKAVADLDVQGIKIH 226

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSEN 230
            L + KGT   K ++ G L   S++
Sbjct: 227 LLHLLKGTPMVKQYEKGKLEFLSQD 251


>gi|325127523|gb|EGC50449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           N1568]
          Length = 442

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 332 LSFVFIYSPRPGTPAANLH 350


>gi|238924037|ref|YP_002937553.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium rectale ATCC
           33656]
 gi|238875712|gb|ACR75419.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium rectale ATCC
           33656]
 gi|291524773|emb|CBK90360.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
           rectale DSM 17629]
          Length = 441

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 11/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K C YC   S   RY+ V  E+ I+   + ++   +     +  +  +G     L   
Sbjct: 154 CNKNCTYCVIPSVRGRYRSVPMEDLIEQAKSLVEQGAKELILVAQETTLYGVD---LYGE 210

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +++  +LD + K   +       +   P  +     +   K     + + + +Q   +  
Sbjct: 211 KSLHKLLDELNKISGLFWIR--IMYCYPEEIYDELIESMIKDEKVCHYLDMPIQHCNDDI 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR +GR    +E +  I + R   P ++    LI   P +T    E  +Q       D L
Sbjct: 269 LRRMGRKTTKAELMERIRMLRERIPDITLRTTLICGFPGETQDNHEELMQFVNDMEFDRL 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  + E+GT    M    D  +   +   D+  L + 
Sbjct: 329 GAFTYSPEEGTKAAAMPDQIDEDI-KADWQADVMELEEE 366


>gi|225027640|ref|ZP_03716832.1| hypothetical protein EUBHAL_01899 [Eubacterium hallii DSM 3353]
 gi|224954954|gb|EEG36163.1| hypothetical protein EUBHAL_01899 [Eubacterium hallii DSM 3353]
          Length = 483

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     +  +++L     +  +  G    S    L
Sbjct: 199 CNNFCSYC-----IVPYVRGRERS-RKPEDIVAEVKKLASEGVVEVMLLGQNVNSYGKNL 252

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L  + +   +       + ++P  +     +    +      + L VQS  
Sbjct: 253 ENPISFAKLLTMVEEVEGIERIRF--MTSHPKDLSDELIEVMAHSKKICKHLHLPVQSGS 310

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R   P ++   D+I   P +T   ++  L        
Sbjct: 311 SRILKLMNRKYTKEHYLELVDKIRTAVPDIAITTDIIVGFPGETEEDFQETLDVVRKAKY 370

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           D    +  +   GT   KM   
Sbjct: 371 DSAFTFIYSKRSGTPAAKMPDQ 392


>gi|307329234|ref|ZP_07608399.1| RNA modification enzyme, MiaB family [Streptomyces violaceusniger
           Tu 4113]
 gi|306885133|gb|EFN16154.1| RNA modification enzyme, MiaB family [Streptomyces violaceusniger
           Tu 4113]
          Length = 500

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 136 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVET 193

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    K   +          +P     +
Sbjct: 194 LVAEGVTEITLLGQNVNAYGSDIGDREAFSKLLRACGKVEGLERVRF--TSPHPRDFTDD 251

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 252 VISAMAETENVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAMPDAAISTDII 311

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 312 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 353


>gi|308069953|ref|YP_003871558.1| hypothetical protein PPE_03202 [Paenibacillus polymyxa E681]
 gi|305859232|gb|ADM71020.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 447

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 70/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +     S + + + +        + +    GG    ++  
Sbjct: 154 CNNFCTFC---IIPWSRGLSRSRDAASIIAQARQLVHAGYKEIVLTGIHTGGYGDDMDNY 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
           +++ +L  + K   +      +IEA+   ++        ++   V    + +Q+ ++  L
Sbjct: 211 DLSDLLWDLEKVEGLERIRISSIEAS--QIDEKMLDVLNRSTKLVRHFHIPLQAGDDTVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    + + R   P ++   D+I   P +T   +    +         + 
Sbjct: 269 KRMRRKYTTEEFYNKMLMIRKAMPDVAITTDVIVGFPGETDEMFRNGYELMKKIGFSEMH 328

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 329 VFPYSKRSGTPAARMEDQVD 348


>gi|239623740|ref|ZP_04666771.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521771|gb|EEQ61637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 492

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +R+L     +  +  G    S    L
Sbjct: 207 CNNFCSYC-----IVPYVRGRERS-RKPEEIIKEIRRLASDGVVEVMLLGQNVNSYGKNL 260

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  + K   +       + ++P  +     +    +G     + L +QS  
Sbjct: 261 ETPMTFAGLLREVEKVDGIRRIRF--MTSHPKDLSDELIEVMAGSGKICRHLHLPLQSGS 318

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++   + +      +   P +S   D+I   P +T   +   L        
Sbjct: 319 SRILKEMNRHYTKEQFLDLAARIKAAVPGISLTTDIIVGFPGETEEDFLETLDVVRRVGF 378

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 379 DSAFTFIYSKRTGTPAAAM 397


>gi|332299924|ref|YP_004441845.1| Radical SAM domain protein [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176987|gb|AEE12677.1| Radical SAM domain protein [Porphyromonas asaccharolytica DSM
           20707]
          Length = 349

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 23/195 (11%)

Query: 28  CVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC   S   HV RY++  +  + +     +            +    GG     
Sbjct: 65  CRNDCYYCGIRSSNEHVTRYRLTADEVMSACARGYEI--------GFRTFVLQGGEDLYW 116

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  ++  I  ++      E  I  +   +E   ++   +AG NR  L  ++  ++ 
Sbjct: 117 RGERLLSLVRSIRSSYP-----ECAITLSLGEMECEEYEALYRAGANRYLLRHETYNQEH 171

Query: 145 LRFLGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +   R H ++ A    + A+   + I  ++   ++   P QT      +L        +
Sbjct: 172 YQ---RLHPSTMAQEHRLQALRDLKQIGYQVGTGIMVGSPGQTTAHLAQDLDFIRQLQPE 228

Query: 201 HLSLYQLTIEKGTLF 215
            + +      + T  
Sbjct: 229 MIGVGPFIPHEDTPL 243


>gi|302344439|ref|YP_003808968.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
 gi|301641052|gb|ADK86374.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
          Length = 310

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 19/238 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ----LTGPRSISSIF 75
           C  +        C +C   +    +    E   +     ++ +R        P  ++  +
Sbjct: 31  CPNRDPRTGAGGCIFCP-PTAYGHHARPDEPVAEQLARGLERLRARARYFGRPAPLALAY 89

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--- 132
           +   + +         +   +A          + +   P  ++   +    +A       
Sbjct: 90  YQAYSSTNASA---PRLAQALAPALQAPGVGGLIVSTRPDCLDGPRWDVLEQAAARAPLW 146

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS    SL  +GR H+ +   AA+  AR     +   ++  LP + +T      +
Sbjct: 147 LELGLQSAHAPSLAAMGRGHDVACFDAAVAQARQRGLDVVAHVVLGLPGEDLTHTNATAE 206

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                 +  + ++ L + +G    ++ +DG     +            +   A  L  
Sbjct: 207 HLAGLGLWGVKIHNLMVLEGARLARLWRDGRHQCWTLAQNAQALAQFVARLPAATLIH 264


>gi|291538852|emb|CBL11963.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           XB6B4]
          Length = 496

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 77/222 (34%), Gaps = 20/222 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     ++ + +L     +  +  G    S    +
Sbjct: 215 CNNFCSYC-----IVPYVRGRERS-REPKEIIREVERLAADGVVEIMLLGQNVNSYGKNL 268

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I K   +       + ++P  +  +  +  + +      + L +QS  
Sbjct: 269 EQPMTFAQLLQEIEKVDGIERIRF--MTSHPKDLSDDLIEVMKNSKKICKHLHLPLQSGS 326

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   R   P ++   D+I   P +T   +E  +        
Sbjct: 327 SRILKLMNRRYDKEHYLELVDKIRAAVPDIALTTDIIVGFPGETEEDFEETMDVVRKVRY 386

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           D    +  +   GT    M    D  +P + +      L + 
Sbjct: 387 DSAFTFIYSKRTGTPAAVM----DDQIPDDVIKARFDRLLKE 424


>gi|260574833|ref|ZP_05842835.1| RNA modification enzyme, MiaB family [Rhodobacter sp. SW2]
 gi|259022838|gb|EEW26132.1| RNA modification enzyme, MiaB family [Rhodobacter sp. SW2]
          Length = 440

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C K   +C F              +      +   R L G         G    +   ++
Sbjct: 158 CDK---FCAFCVVPYTRGAEVSRPVSRL---LAEARDLVGRGVREVTLLGQNVNAYHHVD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEE 142
                 +   + +   +   V +  + ++P+ +E +    +         + L VQS  +
Sbjct: 212 DAGTWGLARLLREMAQIDGLVRLRYMTSHPNDMEDDLIAAHGDLPALAPYLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR + R H A++ +A +   R   P +    D I   P +T   +E  L    +    
Sbjct: 272 RILRAMNRKHTAAQYLALVARVRAARPDILLTSDFIVGFPGETEADFEATLALIRAVNFG 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               ++ +   GT   +  +    V  +    +      Q   +   +   E+S
Sbjct: 332 MAYSFKYSARPGTPAAEKPEVDPAVADARLQRLQALLTAQQRAAQEAMVGREVS 385


>gi|222529490|ref|YP_002573372.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456337|gb|ACM60599.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 471

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 20/247 (8%)

Query: 19  LGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           +  +V+  + C   C YC            +    +  + E++ + Q  G + ++ +  G
Sbjct: 181 VSAFVNIIYGCNNFCSYC---IVPYVRGRERSRRPEEIIYEIEQLAQ-NGIKEVTLL--G 234

Query: 78  GGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
               S    L        +L+ + +   +     +T  ++P  +        R       
Sbjct: 235 QNVNSYGKDLGNSITFPKLLEKVNEIKGIERIRFVT--SHPKDLSDELIVAMRDLEKVCE 292

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R++   + +  +   +   P ++   D+I   P +T   +E 
Sbjct: 293 HIHLPVQSGSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFED 352

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAH 246
            L        D    +  +  +GT   KM       +  +        +  +        
Sbjct: 353 TLDVCRKVEFDSAYTFIYSKRRGTPAEKMPNQVPDDIKYQRFQRLVKLVEEIALKKNRQM 412

Query: 247 GLHAYEI 253
               YEI
Sbjct: 413 LGKTYEI 419


>gi|13473651|ref|NP_105219.1| hypothetical protein mlr4319 [Mesorhizobium loti MAFF303099]
 gi|14024401|dbj|BAB51005.1| mlr4319 [Mesorhizobium loti MAFF303099]
          Length = 446

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      ++ +++L G      +  G    S    +
Sbjct: 169 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADL 222

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I K       + ++   +    + +           +  + L +QS +
Sbjct: 223 PGAPKLGRLVKTILKQVPDVKRLRLS-SIDSIEADDDLLDAIATEPRLMPHLHLSLQSGD 281

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   ++I      R + P + F  D+I   P +T   +E  ++      +
Sbjct: 282 DMILKRMKRRHLRDQSIRFCEDVRKLRPEIVFGADIIAGFPTETDAMFENSIKIVEECGL 341

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +  +GT   +M +
Sbjct: 342 THLHVFPFSPREGTPAARMPQ 362


>gi|297618216|ref|YP_003703375.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297146053|gb|ADI02810.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 291

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 88/236 (37%), Gaps = 11/236 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C       ++++     I++ L     M ++     I SIFF  G   +++ 
Sbjct: 25  CPHNKCTFCSMYK-GTKFRIRPVEEIKADLR----MAKIYYGDWIKSIFFPDGNTIIMKT 79

Query: 87  QNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +++  I     + +     + +   A       + +    ++AG++RI +G++S ++  L
Sbjct: 80  KDLVEIFSYARQLFPFLERITVYGSARFVDKKSLEDLIALKEAGLSRIHMGMESGDDTVL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
             + +   + + I+A    +     +S   +  +     +        +    +  D + 
Sbjct: 140 SRICKGTTSDQIISAGLKLKQAGVELSEYYLVGIGGPELSEQHAINSARVLNQFIPDFIR 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA--HGLHAYEISNHS 257
                  + +  Y+ +  G+  L + + A+    L           + +  +SN+ 
Sbjct: 200 FRTYQPVQNSPLYEQYISGEFELLTPHQALQEIRLLIENLDCPGTMVTSDHVSNYW 255


>gi|221639706|ref|YP_002525968.1| magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66
           kDa subunit BchE [Rhodobacter sphaeroides KD131]
 gi|221160487|gb|ACM01467.1| magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66
           kDa subunit BchE [Rhodobacter sphaeroides KD131]
          Length = 612

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L     + 
Sbjct: 189 EPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEKLVNEHGVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
                   P++   + I            +   V+  I    + V  +    + YRKAG+
Sbjct: 243 FFILADEEPTINRKKFIE--FCEEMIARGLPDKVKWGINTRVTDVKRDKELLKFYRKAGL 300

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             ISLG ++  +  L    +    +E   AI L R          I  L  +T    E  
Sbjct: 301 VHISLGTEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEET 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            + A  +  D  +    T    T  ++
Sbjct: 361 YRMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|307267463|ref|ZP_07548950.1| RNA modification enzyme, MiaB family [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917520|gb|EFN47807.1| RNA modification enzyme, MiaB family [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 471

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
             +  +  ++L  +V+  + C   C YC     +  Y  G+E   +     +  +++L  
Sbjct: 166 EELPVKRDSNLKAWVNIIYGCNNFCTYC-----IVPYTRGREKS-RKPEDIIAEVKELAQ 219

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQ 123
                    G    S    +++   +      + ++    I     + ++P  +      
Sbjct: 220 KGYKEITLLGQNVNSY--GKDLDEDITFAKLLYKLNDIEGIERIRFMTSHPKDISDELIY 277

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             R        + L VQ+   + L+ + R +     +  I   R+  P ++   D+I   
Sbjct: 278 AIRDLDKVCEHLHLPVQAGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGF 337

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           P +T   +   L        D    +  +   GT+   M    D  +  E +  
Sbjct: 338 PGETEEDFLETLDLVERVRFDAAYTFIYSKRAGTVAANMPDQVDDAIKHERLER 391


>gi|307718563|ref|YP_003874095.1| hypothetical protein STHERM_c08730 [Spirochaeta thermophila DSM
           6192]
 gi|306532288|gb|ADN01822.1| hypothetical protein STHERM_c08730 [Spirochaeta thermophila DSM
           6192]
          Length = 449

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 67/193 (34%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C ++C YC       R  + +   +       ++ +++L G R +  I   G   +    
Sbjct: 164 CDRRCAYC-------RVPLARGRAVSDDPARILERVQELEG-RGVREIVLTGVNLAQYRW 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSL 145
           +++ L    +      S          P       ++      +     L VQS   + L
Sbjct: 216 ESLDLGGLLLHLLSHTSRLRFRISSLEPEGFSEALWEALSSPRICPHFHLPVQSGSNRVL 275

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + +GR + A E  A I   R + P   +S D I   P +T   +E         A     
Sbjct: 276 KRMGRWYTAEEISALIARLREVSPDPFISGDFIVGFPGETREDFEATCAFLDENAFSGAH 335

Query: 204 LYQLTIEKGTLFY 216
           L++ +   GT  Y
Sbjct: 336 LFRYSPRPGTAAY 348


>gi|303241845|ref|ZP_07328340.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
 gi|302590620|gb|EFL60373.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
          Length = 311

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 11/182 (6%)

Query: 75  FFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR- 132
           +F   + + +   +    IL+    N      V I I   P  V  +      +  + + 
Sbjct: 83  YFQNYSNTYLPLDDFKKYILEACQDNI-----VAIYISTRPDCVPESYLDFLSEIRIKKG 137

Query: 133 ----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
               I LG+Q++   +L+ L R H  +E I A+   RN         I  LP  +M    
Sbjct: 138 MDIVIELGLQTVNYHALKELNRGHLLAEFIDAVLSIRNYGLETCAHYILDLPMDSMDDTI 197

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              +   +  V+ +  + L I KGT     +  G++V  +    +D             +
Sbjct: 198 EGARILSALKVNQVKCHSLYILKGTELGDRYIRGEIVPVTFEEYIDRTIAFLEYLDPSII 257

Query: 249 HA 250
             
Sbjct: 258 VQ 259


>gi|300087524|ref|YP_003758046.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527257|gb|ADJ25725.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 400

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C  +C YC                ++  + E++  R+      +   + I       + +
Sbjct: 138 CDYRCAYC---IVPTVRPRKSAVPVEKVIDEIRARRREGCREVVLTGTEIGEYRTGNTAL 194

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQ 143
                  ++D + K   +      +++  P  +       +R         L +QS  + 
Sbjct: 195 AG-----LIDAVLKETDIERLRISSLQ--PREITPELMACWRNPRMCRHFHLSLQSGSDP 247

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R +N +E   A+   R + P   ++ D+I   P +T +++   L+         
Sbjct: 248 VLRRMRRRYNTAEYAEALVAIRQVVPEAAVTSDIIAGFPGETDSEFADSLKFIEKCGFAR 307

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           L ++  +   GT    M    D
Sbjct: 308 LHVFPFSARPGTPAAGMEGQVD 329


>gi|229174437|ref|ZP_04301969.1| hypothetical protein bcere0006_35300 [Bacillus cereus MM3]
 gi|228608997|gb|EEK66287.1| hypothetical protein bcere0006_35300 [Bacillus cereus MM3]
          Length = 509

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 FE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P    + D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPNAVFTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +    + Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNTLVNTLAIEKNNRY 442


>gi|329725490|gb|EGG61970.1| radical SAM protein, TIGR01212 family [Staphylococcus epidermidis
           VCU144]
          Length = 317

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   +   I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRAEPIEVQFKKIKERMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKENGV---VGLSIATRPDCLPDDVVEYLAELNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQSTSDLINRAHDMQTYYDGVTKLRKHNINVCTHIINGLPGENYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S+ 
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQQ 249


>gi|253577928|ref|ZP_04855200.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850246|gb|EES78204.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 485

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC    +VR  +  +E         ++ ++ L        +  G        +L
Sbjct: 204 CNNFCSYC-IVPYVRGREKSREP-----EAIIEEIKGLVADGVTEVMLLGQNVNSYGKTL 257

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  +     +       + ++P  +     +   ++    + + L +QS  
Sbjct: 258 EHPVTFAQLLKQVEAIEGLKRIRF--MTSHPKDLSDELIRTMAESKKVCHHLHLPMQSGS 315

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++  + +  +   RN  P +S   D+I   P +T   ++  L        
Sbjct: 316 SRILKIMNRRYDKEKYLELVAKIRNAVPDISLTTDIIVGFPGETEEDFQDTLDVVEKCDF 375

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT   KM
Sbjct: 376 DSAFTFIYSKRSGTPAAKM 394


>gi|212696926|ref|ZP_03305054.1| hypothetical protein ANHYDRO_01489 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676014|gb|EEB35621.1| hypothetical protein ANHYDRO_01489 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 293

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 73/196 (37%), Gaps = 9/196 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    H+  + +     I+S + E+      T PR I  I+   G P ++  
Sbjct: 25  CSHNKCAFCTMY-HMTNFGISPIKDIESDILEISM----TYPRPIERIYLLNGDPFVLST 79

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           Q +  I D I K    V +        N  +    + +  R+ G N +  GV++  ++ L
Sbjct: 80  QKLVEIADLIHKYIPEVKTITSYASFYNLKNKTKEDLKLLREKGYNELWFGVETGNQKVL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLS 203
            +L +  +  +    I   +      +  ++  +     +        +    Y    + 
Sbjct: 140 DWLDKGADLKDYKKGIEKMKYANMTYNAIVMQGVAGNGNSKENARETAKFLNLYPPIGIF 199

Query: 204 LYQLTIEKGTLFYKMH 219
           +    +++G+  YKM 
Sbjct: 200 IMSTDVQRGSKLYKMR 215


>gi|46581419|ref|YP_012227.1| B12 binding /radical SAM domain-containing protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46450841|gb|AAS97487.1| B12 binding domain protein/radical SAM domain protein
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311235076|gb|ADP87930.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 481

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 14/197 (7%)

Query: 28  CVKKCPYCDFN-----SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  KC YC FN      +     V +   +   + EM   R +      S I     + +
Sbjct: 180 CHFKCTYC-FNHAYNAMYAGLGHVVRRRSVDHLIAEM---RDVIARYPTSYIKISDDSFT 235

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                 +   L+  A+ +     +          V  +  +  R+AG   + + +++  E
Sbjct: 236 Y----RVDSWLEEFAEKYPRLIGLPFYCLLRADVVTRDMVRLLREAGCRSVCMSIEAGAE 291

Query: 143 QSLR-FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
              R  L R  +  + I +  L       +  + + A+P+ T+      L   +      
Sbjct: 292 TVRRDVLNRRVSNEKIIESFDLFNEAGIAIYTNSMLAMPRATLADDIATLDLNIRCRPTL 351

Query: 202 LSLYQLTIEKGTLFYKM 218
                +    GT  + M
Sbjct: 352 GHFTIMAPFPGTRIHDM 368


>gi|170741745|ref|YP_001770400.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Methylobacterium sp. 4-46]
 gi|168196019|gb|ACA17966.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Methylobacterium sp. 4-46]
          Length = 548

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 16/206 (7%)

Query: 18  SLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            LGV V  P     C   C +C       ++K  ++  I+     +  + +L     +  
Sbjct: 190 PLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRIRDPKKVVDEIVELKEKYGVGF 243

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVN 131
                  P++    N    +    +      ++   I    + +  + +    YR+AG+ 
Sbjct: 244 FILADEEPTI----NRKKFIAFCKELIEREVDILWGINTRVTDILRDEDVLPLYRRAGLI 299

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            +SLG ++  +  L    +    ++   AI L R     +    I  L  +T    E   
Sbjct: 300 HVSLGTEAAAQLKLDLFNKETTVAQNKKAIQLLREAGIVVEAQFIVGLENETAETLEETY 359

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYK 217
           + A  +A D  +    T    +  ++
Sbjct: 360 RMARDWAPDLANWSMYTPWPFSDLFR 385


>gi|323700753|ref|ZP_08112665.1| RNA modification enzyme, MiaB family [Desulfovibrio sp. ND132]
 gi|323460685|gb|EGB16550.1| RNA modification enzyme, MiaB family [Desulfovibrio desulfuricans
           ND132]
          Length = 449

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 12/215 (5%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC         V R     E  +   L      R+      I+   FG   P  
Sbjct: 159 CSHFCTYCIVPLTRGRSVSRDPAEVEGEVARLLG--AGFREFILS-GINLRHFGRDLPGK 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  ++   L+                   P  +          +     ++ L +QS +
Sbjct: 216 PDFWDLVARLETNFAPEWTGRARLRISSVEPGQLTDKALDVLGASRLVCPQLHLSLQSGD 275

Query: 142 EQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
              L+ +GR H +   A+  +   +  +P M    DLI   P +T  ++E  L    +  
Sbjct: 276 PDVLKAMGRGHYSPQSAVDFMDRLKAFWPVMGLGADLITGFPGETEERFEHTLDLCRALP 335

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           + +  ++  +   GT    +    D+ +  E  A 
Sbjct: 336 LTYGHVFPYSERPGTRAVDLPGAVDVPVRKERAAR 370


>gi|312137014|ref|YP_004004351.1| radical sam domain protein [Methanothermus fervidus DSM 2088]
 gi|311224733|gb|ADP77589.1| Radical SAM domain protein [Methanothermus fervidus DSM 2088]
          Length = 429

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C   C +C       R    +   +   + E++   ++   R    I   GGT +L    
Sbjct: 164 CPGNCGFCQVPKFFGRE--VRSRKLNEIVNEVKEFVKMGARR----IAISGGTGTLYGCK 217

Query: 84  ----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
               I  +    +L  ++K     +     I     +V     +   K     +  G++S
Sbjct: 218 KFKEINEEAFIELLKNLSKITGKENLTIPDI--RVDTVSPEIMEAISKYTNGWVFYGIES 275

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             E+ L+ + +         A+ LAR    +++   I   P +T   +E  L  A    +
Sbjct: 276 GSEKILKKMNKGIKIETVYEAVELAREHGVKVAGSFIVGYPGETEDDFEATLSLADDLML 335

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D   +       GT   +  K+  L
Sbjct: 336 DDYFVSIAEPIPGTPLAEEVKNLPL 360


>gi|146338719|ref|YP_001203767.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Bradyrhizobium sp. ORS278]
 gi|146191525|emb|CAL75530.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Bradyrhizobium sp. ORS278]
          Length = 534

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 20/208 (9%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  I+     +  +  L    
Sbjct: 186 YIYIPMNKRVAIPNMARGCPFTCSFCS------QWKFWRDYRIRDPKKVVDEIETLMREH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++ + + +A   + I ++  +   +   +       +      YRKAG
Sbjct: 240 DVGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILR--DEALLPLYRKAG 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +    ++   AI L R+    +    I  L  +T    E 
Sbjct: 298 LIHVSLGTEAAAQMKLDRFNKETTVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEE 357

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             Q A  +  D  +    T    +  ++
Sbjct: 358 TYQMARDWKPDLANWAMYTPWPFSDLFR 385


>gi|84394394|ref|ZP_00993113.1| tRNA 2-methylthioadenosine synthase [Vibrio splendidus 12B01]
 gi|84374996|gb|EAP91924.1| tRNA 2-methylthioadenosine synthase [Vibrio splendidus 12B01]
          Length = 474

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 23/251 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+    ++    YV     C K C YC                +   L E+  + +  G
Sbjct: 137 DNLPEPKADGATAYVSIMEGCSKYCTYC---VVPYTRGEEVSRPMDDVLYEVAQLAEQ-G 192

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN 121
            R ++ +      F G  P+     +I    + +    ++     I     +P     + 
Sbjct: 193 VREVNLLGQNVNAFRG--PTY--EGDICTFAELLRLVASIDGIDRIRFTTSHPLEFGDDI 248

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            + Y+     V+ + L VQS  ++ L  + R H A E  + I   R   P +  S D I 
Sbjct: 249 IEVYKDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIV 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   ++  ++       D    +  +   GT       D    +P++     L+ 
Sbjct: 309 GFPGESKQDFQDTMKLIKEVDFDMSFSFVFSPRPGTPAA----DYPCDVPAQEKKDRLWE 364

Query: 238 LTQSITSAHGL 248
           L Q++ +    
Sbjct: 365 LQQTVNTQAMR 375


>gi|257091982|ref|YP_003165623.1| Radical SAM domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044506|gb|ACV33694.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 547

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 27/251 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD     R YK     +        + MR L     +  I F     +     
Sbjct: 211 CPYTCSFCDRTVFERLYKTNSAQY------TYEHMRHLRDRFGVYHINFYDDLFT----A 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + +           +                   +KAG   +S+G++S +   +  
Sbjct: 261 HRKRVTELCQLLIDKPLGMNFNCAIRTGHTSDEMLGMLKKAGALMVSMGIESADPGMMER 320

Query: 148 LGRNHNAS----EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               H A     E    +        R     I+ LP +T           LS  +D   
Sbjct: 321 ----HKAGVTLPEVKKTVEQIHAAGLRAKGLFIFGLPGETPETLRHTSDFILSLDLD--- 373

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
             ++ + K +  Y      + V   E   ++ + L   +      H +     S    ++
Sbjct: 374 --EMNMTKFSPMYGAPIWDECVSGKEGEFIEDWRLMNCLNFVFKPHGFS----SREEMDA 427

Query: 264 LHNLNYWRYGD 274
           L+N +  RY D
Sbjct: 428 LYNWHVKRYYD 438


>gi|187933033|ref|YP_001884593.1| biotin synthase [Clostridium botulinum B str. Eklund 17B]
 gi|187721186|gb|ACD22407.1| radical SAM domain protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 348

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 68/188 (36%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR     + +  S    + + ++        +I   GG       +
Sbjct: 60  CKRNCLYCG----LRRDNENIKRYRLSKEEIIDFAKKAV-SYGYKTIVLQGGEDDFFTKE 114

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  I        N+ + +  +        ++ +++AG +R  L +++ +++  + 
Sbjct: 115 KMVEIIKEIK-------NLNVALTLSLGEKTYEEYKAFKEAGADRYLLRIETTDKKLYKE 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +    +  E +  +    ++   +   ++  LP QT+     ++        D + +   
Sbjct: 168 MDPMMSYDERLNCLKNLGHLGYEVGTGVLVGLPNQTLDSLADDILFFKKLNADMIGIGPF 227

Query: 208 TIEKGTLF 215
              + T  
Sbjct: 228 IPNEDTPL 235


>gi|222056421|ref|YP_002538783.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221565710|gb|ACM21682.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 502

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 82/255 (32%), Gaps = 22/255 (8%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C +KC +C    F +   R +   ENFI            L     +         P+  
Sbjct: 205 CQQKCSFCSQQLFWAQTWRARSP-ENFIAELEM-------LNNKYGVEVAMLSDEIPTF- 255

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEE 142
           +      ILD + +       V++ +E     +  + +    YRKAGV  I +GV++  +
Sbjct: 256 DRDRWVRILDLMIERKV---GVKLLMETRVDDILRDADIMDKYRKAGVEHIYVGVEAGSQ 312

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++L    ++    ++  AI +  N         +  +P+ T       ++ A  Y  D  
Sbjct: 313 ETLDLFKKDTKVEQSKLAIDIINNADIVSETSFVLGMPEDTPESIAATIELAKHYNPDMA 372

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
               +        Y       L           YNL + +     +   E+       A+
Sbjct: 373 FFLAIAPWPYAELYPQ-----LEKYVVTKDYRKYNLVEPVLKPINMSVDELEKELGKAAQ 427

Query: 263 SLHNLNYWRYGDYIG 277
             +   +       G
Sbjct: 428 KFYMHKFQNLDKIRG 442


>gi|332558725|ref|ZP_08413047.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides WS8N]
 gi|332276437|gb|EGJ21752.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides WS8N]
          Length = 612

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L     + 
Sbjct: 189 EPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEKLVNEHGVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
                   P++   + I            +   V+  I    + V  +    + YRKAG+
Sbjct: 243 FFILADEEPTINRKKFIE--FCEEMIARGLPDKVKWGINTRVTDVKRDKELLKFYRKAGL 300

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             ISLG ++  +  L    +    +E   AI L R          I  L  +T    E  
Sbjct: 301 VHISLGTEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEET 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            + A  +  D  +    T    T  ++
Sbjct: 361 YRMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|55274301|gb|AAV49043.1| MiaB [Azospirillum lipoferum]
          Length = 422

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 79/205 (38%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGG---GT 80
           C  +C +C            +   I   + ++Q + +      + S      +G    G+
Sbjct: 149 CDHRCTFC---IIPYGRGPSRSVPIGGIVEQVQALVKAGYNEVVLSGVDITSYGPDLPGS 205

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGV 137
           PSL   Q +  +L  + +   +  +    IE +      ++     +     +  + L +
Sbjct: 206 PSL--GQMVRRLLALVPELPRLRLSSIDCIEMD------DDLWRLIENEPRLMPHLHLSL 257

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H  +++IA     R+I P + F  D I   P +T   ++  ++   
Sbjct: 258 QAGDDMVLKRMKRRHGRADSIAFCKRVRSIRPDVVFGADFIAGFPTETEEMFQNTMRLVE 317

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              +  L ++  +   GT   +M +
Sbjct: 318 ECGLTWLHVFPYSPRPGTPAARMPQ 342


>gi|291528906|emb|CBK94492.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
           rectale M104/1]
          Length = 441

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 11/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K C YC   S   RY+ V  E+ I+     ++   +     +  +  +G     L   
Sbjct: 154 CNKNCTYCVIPSVRGRYRSVPMEDLIEQAKNLVEQGAKELILVAQETTLYGVD---LYGE 210

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +++  +LD + K   +       +   P  +     +   K     + + + +Q   +  
Sbjct: 211 KSLHKLLDELNKISGLFWIR--IMYCYPEEIYDELIESMIKDEKVCHYLDMPIQHCNDDI 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR +GR    +E +  I + R   P ++    LI   P +T    E  +Q       D L
Sbjct: 269 LRRMGRKTTKAELMERIRMLRERIPDITLRTTLICGFPGETQDNHEELMQFVNDMEFDRL 328

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  + E+GT    M    D  +   +   D+  L + 
Sbjct: 329 GAFTYSPEEGTKAAAMPDQIDEDI-KTDWQADVMELEEE 366


>gi|226324718|ref|ZP_03800236.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
 gi|225207166|gb|EEG89520.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
          Length = 446

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 73/227 (32%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       DF S    + + +  N     + E+  + Q T             
Sbjct: 160 CDKHCTYCIIPKVRGDFRSVPMEHLLEEAQNLADGGVKELILVAQETTMYGTDLYGEKR- 218

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  +L  + K   +       +   P  +     Q  ++     + + L +
Sbjct: 219 ---------LPQLLRALCKISGLRWIR--ILYCYPEEITDELIQVIKEEPKICHYLDLPI 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  + ++ I  I   R   P ++    LI   P +T  Q E  +    
Sbjct: 268 QHASDGILKRMGRRTSRAQLIETIEKLRREIPDIALRTTLITGFPGETQEQHEELMDFVD 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L ++  + E+ T    M          E    +L  L Q I
Sbjct: 328 QMEFDRLGVFTYSPEEDTPAASMPDQI-PEEVKEERQAELMELQQDI 373


>gi|210635803|ref|ZP_03298621.1| hypothetical protein COLSTE_02560 [Collinsella stercoris DSM 13279]
 gi|210158308|gb|EEA89279.1| hypothetical protein COLSTE_02560 [Collinsella stercoris DSM 13279]
          Length = 238

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 76/198 (38%), Gaps = 19/198 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIE 85
           C  +C YC     V + +  + +  +++ L +++   +   P  + + +  G      ++
Sbjct: 36  CNNRCSYC----IVWKARGPERSVPVEAVLDQVREAERAGIPEVVLTGVNLGAYD--GVD 89

Query: 86  PQN----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQ 138
            ++    I  +L+ I +   +      ++E  P  V+          G      + L +Q
Sbjct: 90  ARDAHVEIDELLNIILRETDIPQVRLSSLE--PMDVDERLIDAMVAGGPRVAPFLHLPLQ 147

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S    +L  + R + A +  A + +  A+     +S D+I   P +T  ++   L     
Sbjct: 148 SGCSATLERMNRPYTAEQYEATVAMIRAKLPAASISCDIIAGFPGETDDEFAQSLALCER 207

Query: 197 YAVDHLSLYQLTIEKGTL 214
                + +++ +   GT 
Sbjct: 208 VGFSRMHVFRYSARPGTP 225


>gi|154686118|ref|YP_001421279.1| YmcB [Bacillus amyloliquefaciens FZB42]
 gi|229890448|sp|A7Z4X2|MIAB_BACA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|154351969|gb|ABS74048.1| YmcB [Bacillus amyloliquefaciens FZB42]
          Length = 509

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSIS----SIFFGGGTP 81
           C K C YC     +  Y  G+E   +     +Q +R+L   G + I+    ++   G   
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +  ++D + K   +         ++P   + +  +   K G  ++ I L VQS
Sbjct: 275 EDMT-YGLGDLMDELRK---IDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQS 330

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L      
Sbjct: 331 GSSAMLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETLSLYREV 390

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   KM  +  + +  E +     +L + I SA  +  YE
Sbjct: 391 EFDSAYTFIYSPREGTPAAKMKDNVPMRVKKERLQRLN-DLVKEI-SAKKMKEYE 443


>gi|77463851|ref|YP_353355.1| magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66
           kDa subunit(bchE) [Rhodobacter sphaeroides 2.4.1]
 gi|126462686|ref|YP_001043800.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides ATCC 17029]
 gi|85681289|sp|Q9RFD3|BCHE_RHOS4 RecName: Full=Anaerobic magnesium-protoporphyrin IX monomethyl
           ester [oxidative] cyclase; Short=Anaerobic
           Mg-protoporphyrin IX monomethyl ester oxidative cyclase
 gi|77388269|gb|ABA79454.1| Magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66
           kDa subunit(bchE) [Rhodobacter sphaeroides 2.4.1]
 gi|126104350|gb|ABN77028.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sphaeroides ATCC 17029]
          Length = 612

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L     + 
Sbjct: 189 EPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEKLVNEHGVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
                   P++   + I            +   V+  I    + V  +    + YRKAG+
Sbjct: 243 FFILADEEPTINRKKFIE--FCEEMIARGLPDKVKWGINTRVTDVKRDKELLKFYRKAGL 300

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             ISLG ++  +  L    +    +E   AI L R          I  L  +T    E  
Sbjct: 301 VHISLGTEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEET 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            + A  +  D  +    T    T  ++
Sbjct: 361 YRMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|303233772|ref|ZP_07320426.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Finegoldia magna
           BVS033A4]
 gi|302495206|gb|EFL54958.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Finegoldia magna
           BVS033A4]
          Length = 461

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 66/230 (28%), Gaps = 18/230 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            Q   ++S L+E+ + + Q     ++          +L  P
Sbjct: 179 CNNFCTYC---IVPYARGREQSRSVESILSEVKRMVNQGYKDITLLGQNVNSYGKTLEHP 235

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                +L  +     +       + ++P  +     +   K       I L  Q+     
Sbjct: 236 VTFTELLTKVNDVEGLERLRF--LTSHPKDISDELIEAMGKLDKVCENIHLPFQAGSNSV 293

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +     +  +   +        S D+I   P +T   ++  L        +  
Sbjct: 294 LERMHRRYTKESYLEKVEKLKKSVKGITFSTDIIVGFPGETEEDFQDTLDVVRKVGYEQA 353

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++     GT         DL     +  V    L + +        YE
Sbjct: 354 FTFKYNRRPGT-------KADLFEDQVDEDVKQDRL-ERLLDVAYPIFYE 395


>gi|226943049|ref|YP_002798122.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Azotobacter
           vinelandii DJ]
 gi|226717976|gb|ACO77147.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Azotobacter vinelandii
           DJ]
          Length = 442

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 75/244 (30%), Gaps = 15/244 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C YC       R +             +          ++      G   +  +  
Sbjct: 157 CSKYCSYC--VVPYTRGEEVSRPPEDVLAEVIHLAENGVREVTLLGQNVNGYRATTADGR 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           P + A +L  +A    +      T  ++P          + +    V  + L VQS  ++
Sbjct: 215 PVDFAELLHLVAAVDGIDRLRYTT--SHPLEFSDAIIAAHAEIPELVKFVHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + RNH A E  + I   +   P +S   D I   P +T   +   ++       D 
Sbjct: 273 ILAAMKRNHTALEYKSRIRKLKAAVPDISISSDFIVGFPGETEQDFAQTMKLIEEVGFDF 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL-----HAYEISNH 256
              +  +   GT   ++  D    L  + + +    + Q                 +S++
Sbjct: 333 SFSFVFSPRPGTPAAELPDDTPEELKKQRLQILQNRIYQQGFEISRRMVGSIQRILVSDY 392

Query: 257 SFLG 260
           S   
Sbjct: 393 SKKD 396


>gi|315926040|ref|ZP_07922241.1| TIGR01212 family radical SAM protein [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315620654|gb|EFV00634.1| TIGR01212 family radical SAM protein [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 299

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 73/227 (32%), Gaps = 34/227 (14%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----- 74
           C  +        C +C                      +++  ++   P+   SI     
Sbjct: 29  CPNRDGTLGTGGCTFCS-----AGGSGEFAAPFTPIADQIRAAKKRVDPKFPKSIPPADR 83

Query: 75  ----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV 130
               +F   T +  +P+ +  + +  A    +   V +++   P  +            V
Sbjct: 84  RYLAYFQSYTNTYGDPERLGALWEAAAAPGDI---VGLSVGTRPDCLPPPILNALSA--V 138

Query: 131 NR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           NR     + LG+Q++  ++ R + R ++      A     +    +   +I  LP ++  
Sbjct: 139 NRTKPVWVELGLQTIHPRTARAIHRGYDLPVFERAYRDLTDRGIAVVVHVILGLPGESRD 198

Query: 186 QWEMELQRALSYAV--DHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
                ++     A     + L  L I KGT   + +      L S +
Sbjct: 199 DMLATVRYLAHLAPALAGIKLQLLHILKGTALAEQYAADPFPLFSLD 245


>gi|253583333|ref|ZP_04860531.1| tRNA 2-methylthioadenosine synthase [Fusobacterium varium ATCC
           27725]
 gi|251833905|gb|EES62468.1| tRNA 2-methylthioadenosine synthase [Fusobacterium varium ATCC
           27725]
          Length = 436

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 21/226 (9%)

Query: 7   YENNMTGQGSNSLGV-YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            + +   + + S+ + Y     C   C YC     +  Y  G+E  +      +  ++Q 
Sbjct: 136 LDADFDSKKTASISITY----GCNNFCTYC-----IVPYVRGRERSVP-LDEIIHDVKQY 185

Query: 66  TGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                   I  G    S         N A +L+ I K       +   I  +P       
Sbjct: 186 VEKGYKEIILLGQNVNSYGKDFKNGDNFAKLLEEICKVEG--DFLVRFISPHPRDFSDEV 243

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
                K       + L +QS   + L+ + R +   + IA     +   P ++   D+I 
Sbjct: 244 IDVIAKNDKIAKSLHLPLQSGSTRILKMMNRGYTKEQYIALAEKIKEKIPGVALTADIIV 303

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             P +T   +   L        ++  ++  +I +GT    M    D
Sbjct: 304 GFPGETEEDFLDTLDVVKRIQFENSFMFMYSIRQGTKAADMDNQID 349


>gi|330976853|gb|EGH76884.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 442

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|257866929|ref|ZP_05646582.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257873262|ref|ZP_05652915.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257800985|gb|EEV29915.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257807426|gb|EEV36248.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 327

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 10/203 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           +    + F  E+  M +         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPEAPLPEQFEKEIAMMHKKWPQVDKYIVYFQNFTNTHAPVAVIRE 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +    T+   V I++   P  +  +      +        + LG+Q+  E +   +
Sbjct: 112 RFEQV---LTLPGVVGISVGTRPDCLPEDVVDYLAELNQRFYLWVELGLQTTFETTSNAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T+   +  ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVASLRKHNIRVCTHLINGLPGETIEMMQENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            + + T   + + +G L L   +
Sbjct: 229 HLMRNTRMLRDYHEGRLQLMRRD 251


>gi|254424981|ref|ZP_05038699.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. PCC
           7335]
 gi|196192470|gb|EDX87434.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. PCC
           7335]
          Length = 453

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 16/246 (6%)

Query: 8   ENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           E+    +  + +  +V+  + C ++C YC          + Q    ++   EM  +    
Sbjct: 135 EDITKPRRESEVSAWVNVIYGCNERCTYC---VVPGVRGLEQSRTKEAIRAEMAALGDQ- 190

Query: 67  GPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEV 119
           G   ++ +      +G   P +         L  +         +E      ++P     
Sbjct: 191 GYAEVTLLGQNIDAYGRDLPGITSEGRRENTLTDLLHYVHDVPGIERIRFATSHPRYFTE 250

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDL 175
              +   +         +  QS   Q L+ +GR +   +    I   R   P   +S D+
Sbjct: 251 RLVRACAELPKVCEHFHIPFQSGNNQVLKAMGRGYTREKYQRIIETVRRYVPDASISADV 310

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I A P +T  Q++  L        D ++    +   GT   +     D  +  + +    
Sbjct: 311 IVAFPGETEAQFQDTLSLMEEIVFDMVNTAAYSPRPGTPAAEWTNQLDEEVKQDRLQRIN 370

Query: 236 YNLTQS 241
           + ++Q 
Sbjct: 371 HLVSQQ 376


>gi|6690711|gb|AAF24279.1| BchE [Rhodobacter sphaeroides]
          Length = 611

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 69/207 (33%), Gaps = 14/207 (6%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L     + 
Sbjct: 189 EPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEKLVNEHGVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV 130
                   P++   + I            +   V+  I    + V  +    + YRKAG+
Sbjct: 243 FFILADEEPTMNRKKFIE--FCEEMIARGLPDKVKWGINTRVTDVKRDKELLKFYRKAGL 300

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             ISLG ++  +  L    +    +E   AI L R          I  L  +T    E  
Sbjct: 301 VHISLGTEAAAQLKLDVFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEET 360

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
            + A  +  D  +    T    T  ++
Sbjct: 361 YRMAWDWQPDLANWSMYTPWPFTPLFQ 387


>gi|153842125|ref|ZP_01993473.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           AQ3810]
 gi|149745410|gb|EDM56661.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           AQ3810]
          Length = 305

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 11  CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 64

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 65  HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 124

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 125 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 184

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q+I +    ++
Sbjct: 185 DMSFSFIFSPRPGTPAA----DYPCDIPEQVKKERLYELQQTINAQAMRYS 231


>gi|220928129|ref|YP_002505038.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulolyticum
           H10]
 gi|219998457|gb|ACL75058.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulolyticum
           H10]
          Length = 446

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 26/266 (9%)

Query: 5   SAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           + Y +      S+   VY+     C  +C YC            +   ++S + E     
Sbjct: 131 TDYLDEERVLSSSKHSVYLKISEGCDNRCTYC---IIPFLRGKYRSRKMESLVRE----A 183

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALIL--DGIAKNWTVSSNVEIT--IEANPSSVEV 119
           +L   +    I       +          +  + I K   +S  +E    +   P  ++ 
Sbjct: 184 ELLAGKGTKEIVIVAQDSTRYGIDLYGKKMLPELIRKISDISG-IEWVRLLYCYPEEIDD 242

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DL 175
                          + + +Q   ++ L+ +GR    SE    ++  R     ++    L
Sbjct: 243 ELINEIAINPKVCKYLDIPIQHASDRVLKQMGRRGTISEIKQVLNKLREKVSGITIRTSL 302

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I   P +T   +E  +     + +D + ++  + E+GT   KM       +  +      
Sbjct: 303 IVGFPGETEEDFEELMAFVKEFRLDRVGVFTYSKEEGTAAAKMKNQIPKHIKIKRQK--- 359

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGA 261
                 I     + + EI N S  G 
Sbjct: 360 -----KILELQNVISREI-NQSRNGK 379


>gi|83309313|ref|YP_419577.1| 2-methylthioadenine synthetase [Magnetospirillum magneticum AMB-1]
 gi|82944154|dbj|BAE49018.1| 2-methylthioadenine synthetase [Magnetospirillum magneticum AMB-1]
          Length = 452

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 27/206 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---------- 77
           C  +C +C     +  +  G    +      ++ +++L        +  G          
Sbjct: 178 CDHRCTFC-----IIPFGRGPNRSVP-MGRIVEQIKELVAGGFNEVVLTGVDVTAYGADL 231

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
            G P L   Q +  +L  + +   +          +P  V+ +           +    L
Sbjct: 232 PGKPGL--GQLVRRLLAALPELPRLR-----LSSLDPVEVDEDLLAAIASEARLLPHFHL 284

Query: 136 GVQSLEEQSLRFLGRNHNASEAI--AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQ+ ++  L+ + R H   + I  AA   A      +  D+I   P +    ++  L  
Sbjct: 285 SVQAGDDTILKRMKRRHLRGDVITLAARIRALRPDAVLGADIIAGFPTEDEEMFQHSLDL 344

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                + HL ++  +   GT   +M 
Sbjct: 345 VDEAGLTHLHVFPFSARPGTPAARMP 370


>gi|327188593|gb|EGE55803.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli CNPAF512]
          Length = 482

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 196 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLVE-AGVREITLLGQNVNAWHGAGPR 251

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++    + +R     +  + L VQS 
Sbjct: 252 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIEAHRDLRALMPYLHLPVQSG 308

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E ++ I   R + P ++   D I   P +T   +E  L+      
Sbjct: 309 SDRILKAMNRRHTAAEYLSLIDRIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVR 368

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 369 YAQAFSFKYSTRPGTP 384


>gi|229162708|ref|ZP_04290665.1| hypothetical protein bcere0009_34780 [Bacillus cereus R309803]
 gi|228620590|gb|EEK77459.1| hypothetical protein bcere0009_34780 [Bacillus cereus R309803]
          Length = 509

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 79/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 FE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNTLVNKLAIEKNDRY 442


>gi|118443818|ref|YP_878177.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
           novyi NT]
 gi|229890490|sp|A0Q0M5|MIAB_CLONN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|118134274|gb|ABK61318.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium novyi NT]
          Length = 452

 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E         +  ++ L           G    S    +
Sbjct: 171 CNNFCSYC-----IVPYVRGRERSRDP-QNIIDEIKDLVSKGYKEITLLGQNVNSYGKGL 224

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           EP+ N A +L  + K   +       + ++P  V     +   +      +    +QS  
Sbjct: 225 EPEINFATLLRMVNKIDGLERIRF--MTSHPKDVSDELIKAMAECEKVCEQGHFALQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  +   R   P +    D+I   P +T   +E  L        
Sbjct: 283 TEILQKMNRKYTREDYLTLVKKLRKAMPNVGISTDIIIGYPGETEKDFEDTLSIVKEIEF 342

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   K+
Sbjct: 343 DSAFTFIYSKREGTPAAKL 361


>gi|325859700|ref|ZP_08172830.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola CRIS
           18C-A]
 gi|325482626|gb|EGC85629.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola CRIS
           18C-A]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   ++S L E+       G + ++    ++   G  P+ 
Sbjct: 155 CNNFCHYC---IVPFTRGRERSRDVESILKEV-HDLHDKGFKEVTLLGQNVNSYGLLPNG 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + + K      ++ +     NP  +  +  +         N I    QS 
Sbjct: 211 RRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIVEAIAAEPNLCNHIHFPAQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +   + +A +   R + P      D+      +T   ++  L       
Sbjct: 271 SNNVLKLMNRKYTREDYLAKVAAIRRLVPDCGLTTDIFIGYHNETEEDFQQTLSLMREVG 330

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   +
Sbjct: 331 FDSAFMFKYSERPGTYAAR 349


>gi|332983460|ref|YP_004464901.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332701138|gb|AEE98079.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
          Length = 586

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 83/247 (33%), Gaps = 13/247 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC  +S     +      ++  L  +  MR            F           
Sbjct: 186 CPFRCSYC-LSSTTDGIRYVPMGRVKDDLAHI--MRSGAKQVKFLDRTFNAHR---RRAM 239

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
           +I   +    K       +    E     ++ +  +       +  +  +G+QS+ E SL
Sbjct: 240 DIWRFITDYDKRP---EGMRFHFEICADIIDDDMLEFLLSVPDDLFQFEIGIQSVNESSL 296

Query: 146 RFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + +GR+ +       +  LAR     +  DLI  LP +  + +      A     D L L
Sbjct: 297 KTVGRHTDLHRMAHVVAILARRGNIHLHLDLIAGLPNEDFSSFGRSFDYAYGLRPDVLQL 356

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNHSFLGAES 263
             L + KG+    M +              L+N + S  +   LH  E + N  +     
Sbjct: 357 GFLKLLKGSELRNMAEQFGYAYDDRPPYEVLFNDSISFDALCELHWVEDVLNKYYNSGRL 416

Query: 264 LHNLNYW 270
           +H LNY 
Sbjct: 417 VHTLNYI 423


>gi|325568220|ref|ZP_08144628.1| TIGR01212 family radical SAM protein [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158253|gb|EGC70405.1| TIGR01212 family radical SAM protein [Enterococcus casseliflavus
           ATCC 12755]
          Length = 327

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 10/203 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           +    + F  E+  M +         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPEAPLPEQFEKEIAMMHKKWPQVDKYIVYFQNFTNTHAPVAVIRE 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +    T+   V I+I   P  +  +      +        + LG+Q+  E +   +
Sbjct: 112 RFEQV---LTLPGVVGISIGTRPDCLPADVVDYLAELNQRFYLWVELGLQTTFETTSNAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T+   +  ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVASLRKHNIRVCTHLINGLPGETIEMMQENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            + + T   + + +G L L   +
Sbjct: 229 HLMRNTRMLRDYHEGRLQLMRRD 251


>gi|229098241|ref|ZP_04229188.1| hypothetical protein bcere0020_34750 [Bacillus cereus Rock3-29]
 gi|229104336|ref|ZP_04235005.1| hypothetical protein bcere0019_34840 [Bacillus cereus Rock3-28]
 gi|229117258|ref|ZP_04246636.1| hypothetical protein bcere0017_35380 [Bacillus cereus Rock1-3]
 gi|228666158|gb|EEL21622.1| hypothetical protein bcere0017_35380 [Bacillus cereus Rock1-3]
 gi|228679034|gb|EEL33242.1| hypothetical protein bcere0019_34840 [Bacillus cereus Rock3-28]
 gi|228685139|gb|EEL39070.1| hypothetical protein bcere0020_34750 [Bacillus cereus Rock3-29]
          Length = 509

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +E   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 LE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKETIPSAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|152977112|ref|YP_001376629.1| putative radical SAM protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025864|gb|ABS23634.1| conserved hypothetical radical SAM protein [Bacillus cytotoxicus
           NVH 391-98]
          Length = 319

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 64/197 (32%), Gaps = 8/197 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +    + +   
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVVTQYYEMKEKMHTKWKDGKCIAYFQAYTNTHAPVEVLKEK 113

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLG 149
            + +     V   V ++I   P  +  +  +   +        + LG+Q++ E++   + 
Sbjct: 114 FEPLLAEKDV---VGLSIATRPDCLPDDVVEYLAELNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    I  ++  R     +   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPTYIEGVNKLRKHGINVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDLVL 226
            KGT   K ++ G L  
Sbjct: 231 LKGTPMVKQYEKGQLQF 247


>gi|119386409|ref|YP_917464.1| RNA modification protein [Paracoccus denitrificans PD1222]
 gi|229890585|sp|A1B8C4|MIAB_PARDP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|119377004|gb|ABL71768.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paracoccus denitrificans
           PD1222]
          Length = 445

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPS 82
           C K   +C F              +   L E + +    G R I+ +      + G  P 
Sbjct: 163 CDK---FCAFCVVPYTRGAEVSRPVSRILAEARDLVAR-GVREITLLGQNVNGWHGEGPE 218

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    ++  IA+   +      T  ++P+ +  +    +R     +  + L VQS 
Sbjct: 219 G-SEWGFGRLIRAIAEIDGLDRIRYTT--SHPNDMADDLIAAHRDEPKLMPYLHLPVQSG 275

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H   + +  I   R   P +    D I   P +T    +  L+   +  
Sbjct: 276 SDRILKAMNRRHTVDQYLRLIERIREARPDIMLTSDFIVGFPGETDQDHQGTLELVRAVN 335

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
                 ++ +   GT  Y+  
Sbjct: 336 FGTAFSFKYSPRPGTPAYERP 356


>gi|297616327|ref|YP_003701486.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297144164|gb|ADI00921.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 358

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 66/193 (34%), Gaps = 12/193 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C + C YC     + R+      +       ++  ++  G    + +   G  P     
Sbjct: 64  YCSRACLYCG----ISRHNRHLSRYRMDVEEILEAAKEAVGMGFKTIVLQSGEDP-FYST 118

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             I  ++  I         +++ +  +       ++  +++AG +R  L  ++ +    R
Sbjct: 119 STITRLVSQIK-------AMDVAVTLSVGERRREDYAAWKEAGADRYLLKFETSDPDLYR 171

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L    + ++ +  +   +++   +   ++  LP QT++    ++       +  + +  
Sbjct: 172 RLRPGCSMAQRLQCLTYLKDLDYEVGSGIMVGLPGQTLSSMADDILLMRKLQLSMVGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T      
Sbjct: 232 FIPHPATPLASAQ 244


>gi|307109146|gb|EFN57384.1| hypothetical protein CHLNCDRAFT_142788 [Chlorella variabilis]
          Length = 959

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 79/245 (32%), Gaps = 29/245 (11%)

Query: 28  CVKKCPYCDFNSH---VRRYKVGQENFIQ--------SFLTEMQWMRQLTGPRSISSIFF 76
           C   C YC    H    RRY + ++  ++           T M    +L  P+ +  +  
Sbjct: 106 CENDCGYCGIRKHQRRARRYTMPRDEVVEVADWAFRHRLGTLMLQSGELNTPQRMKYLTD 165

Query: 77  GGG----TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
                      ++ +    ++D        ++ V + +  +   +    +Q  + AG +R
Sbjct: 166 VVAAVKERTRALDAEQ--RLVD-PEALPKDAAGVGLCVALSVGELPREQYQQLKDAGADR 222

Query: 133 ISLGVQSLEEQSLRFLG-----------RNHNASEAIAAIHLARNIFPRMSFDLIYALPK 181
             L ++S   Q    +            R H        +   ++I   +   ++  LP 
Sbjct: 223 YLLRIESSNPQLYASIHPPAQARASGPARFHKWENRTRCLRDLKDIGFMIGTGVMVGLPG 282

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           QT+     ++        D + +     E GT    M +     +  +    D+  LT  
Sbjct: 283 QTLRDLAGDIMFFRDLGADMIGMGPYITEAGTPVADMWEQQFGHVDKKKHMQDMLTLTTR 342

Query: 242 ITSAH 246
           + +  
Sbjct: 343 MNALA 347


>gi|258424174|ref|ZP_05687056.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A9635]
 gi|257845795|gb|EEV69827.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A9635]
          Length = 317

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 69/215 (32%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLAELNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTIHQSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L + KGT   K +  G L   ++  
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEE 250


>gi|168179386|ref|ZP_02614050.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
 gi|182669715|gb|EDT81691.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
          Length = 432

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTP 81
           C + C YC   F       K  +          M+ +++L+        +S I       
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPE--------KIMEEVKKLSKHGFKEIILSGIDIASYGF 203

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQ 138
            L    N+  IL+ I K   +      +I  +P+             ++       L +Q
Sbjct: 204 DLEGKYNLTSILEEIDKVEGIERIRIGSI--DPTFFTEEEIIRISKLKRF-CPHFHLSLQ 260

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   ++L+ + R +   +    +H  R     +S   D+I   P +T  ++    +    
Sbjct: 261 SGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRD 320

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +  + +++ +  KGT   +M    D
Sbjct: 321 IKLSKMHVFKFSPRKGTRAEEMKNQVD 347


>gi|126172736|ref|YP_001048885.1| radical SAM domain-containing protein [Shewanella baltica OS155]
 gi|125995941|gb|ABN60016.1| Radical SAM domain protein [Shewanella baltica OS155]
          Length = 295

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 83/241 (34%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD   + +  K  +   +     ++  + +   P  +S +F   G    +    +  
Sbjct: 32  CRFCD--MYTQPQKAFRAQKLDKVEQDILAVARSGAP--VSRVFLADGDAMSLPFARLEA 87

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I   I ++   V+      +  N ++         R+ G++ + +G +S +++ L  + +
Sbjct: 88  ICKLINRHLPQVTRISSYCLPRNLNNKTPEQLARLRELGLSLLYVGCESGDDEVLAKIQK 147

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQLT 208
                 ++AA+   R    + S  ++  L     +        +   +   D+LS   +T
Sbjct: 148 GETFESSLAALLKIRAAGMKSSVMILNGLGGVALSHQHAVNSAKLMNAAQPDYLSTLVVT 207

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +  GT        G   LP     + L+    ++     L              S H  N
Sbjct: 208 LPLGTERMDAVFGGQFQLPD---QMGLFQEMHTLLEHLELEQ--------TIFRSDHASN 256

Query: 269 Y 269
           Y
Sbjct: 257 Y 257


>gi|291616694|ref|YP_003519436.1| YleA [Pantoea ananatis LMG 20103]
 gi|291151724|gb|ADD76308.1| YleA [Pantoea ananatis LMG 20103]
 gi|327393120|dbj|BAK10542.1| tRNA-I(6)A37-MiaB YleA [Pantoea ananatis AJ13355]
          Length = 478

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +          L   Q   Q     ++   ++    G     +
Sbjct: 161 CNKYCTFC--VVPYTRGEEVSRPSDDILLEIAQLAAQGVREVNLLGQNVNAYRGATFDGD 218

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
               A +L  +A    +      T  ++P     +  + YR     V+ + L VQS  ++
Sbjct: 219 VCTFAELLRLVAAIDGIDRIRFTT--SHPIEFTDDIIEVYRDTPELVSFLHLPVQSGADR 276

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I    A      +S D I   P +T   +E  ++       D 
Sbjct: 277 ILTLMKRAHTALEYKAIIRKLRAARPDIEISSDFIIGFPGETQQDFEQTMKLIGDINFDM 336

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    + Q   +
Sbjct: 337 SYSFIYSARPGTPAADLPDDVSEDEKKQRLYILQERINQQAMA 379


>gi|260879147|ref|ZP_05891502.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           AN-5034]
 gi|308090270|gb|EFO39965.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           AN-5034]
          Length = 467

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q+I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDIPEQVKKERLYELQQTINAQAMRYS 377


>gi|91975966|ref|YP_568625.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisB5]
 gi|91682422|gb|ABE38724.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisB5]
          Length = 567

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 25  WP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P     C   C +C       ++K  ++  ++     +  + +L     +         
Sbjct: 201 IPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEELVNKYQVGFFILADEE 254

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P++   + I    + IA+   ++  V+  I    + +  +    + Y +AG+  +SLG +
Sbjct: 255 PTINRKKFIQFCEELIAR--GLNKKVQWGINTRVTDILRDEQLLKFYNEAGLMHVSLGTE 312

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +  L    +    S+   AI L R     +    I  L  +T    E   + A+ + 
Sbjct: 313 AAAQLKLDLFNKETKISDNKKAIRLLREAGIVVEAQFIVGLDSETPETLEETYRMAMDWK 372

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D  +    T    T  +K
Sbjct: 373 PDLANWSMYTPWPFTPLFK 391


>gi|311030160|ref|ZP_07708250.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
           m3-13]
          Length = 514

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 73/203 (35%), Gaps = 12/203 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +Q +R L           G    +  +  
Sbjct: 223 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEVRHLAAQGYKEITLLGQNVNAYGKDF 276

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D + +   +         ++P   +    +   K G  ++ I L VQS   +
Sbjct: 277 EDIKYGLGDLMDEIRKIDIPRIRFTTSHPRDFDDRLVEVLAKGGNLLDHIHLPVQSGSSE 336

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  +        D 
Sbjct: 337 ILKLMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETEEQFEETMSLYREVEFDT 396

Query: 202 LSLYQLTIEKGTLFYKMHKDGDL 224
              +  +  +GT   KM  +  L
Sbjct: 397 AYTFIYSPREGTPAAKMVDNVPL 419


>gi|33595815|ref|NP_883458.1| hypothetical protein BPP1141 [Bordetella parapertussis 12822]
 gi|81429531|sp|Q7WB66|MIAB_BORPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33565894|emb|CAE36442.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 475

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    L       Q     ++   +   + G      E 
Sbjct: 181 CSKYCSFCVVPYTRGEEVSRPFDDVLLEIADLADQGVKEVTLLGQNVNAYRGAMGDSGEI 240

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A++L+ + +   +      T  ++P  +       Y +    V+ + L VQ+  ++ 
Sbjct: 241 ADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRV 298

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R + A E  + +   R   P ++   D I   P +T   ++  ++       D  
Sbjct: 299 LAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFIVGFPGETEEDFQKTMKLIEDVGFDTS 358

Query: 203 SLYQLTIEKGTLFYKMH 219
             +  +   GT    +H
Sbjct: 359 FSFVYSRRPGTPAADLH 375


>gi|296116295|ref|ZP_06834911.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977114|gb|EFG83876.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 498

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                + + + E + +    G R I+    ++    G    
Sbjct: 210 CDKFCSFC---VVPYTRGAEASRPVAAIMDEARRLVAH-GVREITLLGQNVNAYHGDGPD 265

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +A +   +A    V      T  ++P  ++      +R+    +  + L VQS  
Sbjct: 266 GTTWGLARLTAELAGQVGVERIRYTT--SHPRDMDDGLVAAHREQPALMPFLHLPVQSGS 323

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E    +   R   P   +S D I   P +T   +E  +Q       
Sbjct: 324 DRVLAAMNRGHTAQEYRDLVARLRTARPDLALSSDFIVGHPGETDEDFEQTMQLIRDIGF 383

Query: 200 DHLSLYQLTIEKGTL 214
                ++ +   GT 
Sbjct: 384 AQAYSFKYSPRPGTP 398


>gi|167041484|gb|ABZ06234.1| putative Radical SAM superfamily protein [uncultured marine
           microorganism HF4000_007I05]
          Length = 505

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 88/256 (34%), Gaps = 18/256 (7%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC +C     F  +  R+   +          +  ++ +    +I +I        +
Sbjct: 227 CPFKCTFCCINAPFEKNTIRFWTPK--------HIINQIKIIVEDYNIFNIKIPDEMF-V 277

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEE 142
           + P+ ++ I D I  +   S        A   ++ +    +   K+G   ++LG++S  +
Sbjct: 278 LNPKQVSEICDEIINSGYGSKLNFWAY-ARIDTLEDNEMLKKMIKSGFKWLALGIESSSK 336

Query: 143 QSLRFL--GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                +  GR  N  +    +   R++   +  + I+ LP       +  L  +L    +
Sbjct: 337 HVRDGVVKGRF-NNYDIEDIVKKVRDMGFFVGANYIFGLPDDNNDSMKETLDLSLRINSE 395

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
             + Y      G+  Y M K     LP + V       +Q    +  L    +     L 
Sbjct: 396 WANFYSGMAYPGSQLYPMAKKKGWTLPDDKVGPGWIGYSQHAYESLPLRTEHVKGSEVLE 455

Query: 261 AESLHNLNYWRYGDYI 276
                   Y++  DY+
Sbjct: 456 FRDKAFDIYFKSSDYL 471


>gi|15677701|ref|NP_274862.1| hypothetical protein NMB1866 [Neisseria meningitidis MC58]
 gi|304388407|ref|ZP_07370514.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           ATCC 13091]
 gi|81784211|sp|Q9JXV8|MIAB_NEIMB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|7227123|gb|AAF42200.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|304337588|gb|EFM03750.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           ATCC 13091]
 gi|316985478|gb|EFV64425.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           H44/76]
 gi|325139525|gb|EGC62065.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           CU385]
 gi|325143760|gb|EGC66077.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M01-240013]
 gi|325200923|gb|ADY96378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           H44/76]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|307565379|ref|ZP_07627870.1| MiaB-like protein [Prevotella amnii CRIS 21A-A]
 gi|307345911|gb|EFN91257.1| MiaB-like protein [Prevotella amnii CRIS 21A-A]
          Length = 452

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 65/190 (34%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I+S + + +      G R I       G       +
Sbjct: 169 CNYFCTYC---TIPYARGFSRNPPIKSLVKQAE-EAVAEGGREIVLTGVNIGDFGRTTNE 224

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  +     +      ++E  P  ++ +  +     +  +    + +QS  ++ L
Sbjct: 225 SFLDLVKALDNVKGIERYRISSLE--PDLIDDDLIEYCATSEHFMPHFHIPLQSGSDEVL 282

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+++ +     I L +   P   +  D++     +    +E       S  +  L 
Sbjct: 283 KLMHRHYDRALFADKILLIKERMPNAFIGVDVMVGCRGEKPEFFEDSYNFIDSLPITQLH 342

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 343 VFPYSERPGT 352


>gi|302185143|ref|ZP_07261816.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. syringae 642]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|295399584|ref|ZP_06809566.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109861|ref|YP_003988177.1| hypothetical protein GY4MC1_0750 [Geobacillus sp. Y4.1MC1]
 gi|294979050|gb|EFG54646.1| conserved hypothetical protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214962|gb|ADP73566.1| conserved hypothetical protein [Geobacillus sp. Y4.1MC1]
          Length = 320

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C              N     +T+   M++    +  +  +             + +
Sbjct: 54  CTFCS----AAGSGDFAGNRADDLVTQFNQMKEKMHKKWKNGKYLAYFQAFTNTHAPVDV 109

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +       +   V ++I   P  +  +  +   +        + LG+Q++ E++   +
Sbjct: 110 LREKYETVLNLDGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHERTALLI 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R    R+   +I  LP +         +   S  +  + ++ L 
Sbjct: 170 NRAHDFQCFADGVEKLRKRGIRVCAHIINGLPLEDYDMMMETAKTVASMDIQGIKIHLLH 229

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K ++ G +   S    V L      I     +  
Sbjct: 230 LLKGTPMVKQYEKGLVRFLSFEEYVHLVCDQLEILPPEMIVH 271


>gi|167764876|ref|ZP_02436997.1| hypothetical protein BACSTE_03268 [Bacteroides stercoris ATCC
           43183]
 gi|167697545|gb|EDS14124.1| hypothetical protein BACSTE_03268 [Bacteroides stercoris ATCC
           43183]
          Length = 227

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 3/132 (2%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQS 144
            +  +     +   V   V + I   P  +  +     +   K     +  G++S  +++
Sbjct: 16  ELESLKRKYEEALAVDGVVGLVIGTRPDCMPDDLLRYLENLNKHTFLLVEYGIESTRDET 75

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR + R H     + A+             +I  LP +T      + +      +  L +
Sbjct: 76  LRRINRGHTFQVTVNAVERTAACGILTGGHVILGLPGETHRSIVAQAKDLSRLPLTTLKM 135

Query: 205 YQLTIEKGTLFY 216
           +QL + +GT   
Sbjct: 136 HQLQLIRGTRMA 147


>gi|294669853|ref|ZP_06734912.1| hypothetical protein NEIELOOT_01746 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308246|gb|EFE49489.1| hypothetical protein NEIELOOT_01746 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 440

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   LTE+  + Q  G + I     ++    G   L++ 
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRG---LMDD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             +      +     +     I     +P        + YR     V+ + L +QS  ++
Sbjct: 213 GEVCDFATLLRIVHEIPGIERIRFTTSHPREFSDAIIECYRDLPKLVSHLHLPIQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D 
Sbjct: 273 VLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDL 332

Query: 202 LSLYQLTIEKGTLFYKMH 219
             ++  +   GT    +H
Sbjct: 333 SFVFIYSPRPGTPAANLH 350


>gi|288957725|ref|YP_003448066.1| miaB-like tRNA modifying enzyme [Azospirillum sp. B510]
 gi|288910033|dbj|BAI71522.1| miaB-like tRNA modifying enzyme [Azospirillum sp. B510]
          Length = 423

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 80/204 (39%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGG---GT 80
           C  +C +C            +   I   + ++Q + +      + S      +G    G+
Sbjct: 150 CDHRCTFC---IIPYGRGPSRSVPIGGIVEQVQALVKAGYNEVVLSGVDITSYGPDLPGS 206

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           PSL   Q +  +L  + +   +  +    IE     ++ + ++        +  + L +Q
Sbjct: 207 PSL--GQMVRRLLALVPELPRLRLSSIDCIE-----MDDDLWRLIGNEPRLMPHLHLSLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           + ++  L+ + R H  +++IA     R++ P + F  D I   P +T   ++  L+    
Sbjct: 260 AGDDMVLKRMKRRHGRADSIAFCQRVRSVRPDVVFGADFIAGFPTETEEMFQNTLRLVEE 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             +  L ++  +   GT   +M +
Sbjct: 320 CGLTWLHVFPYSPRPGTPAARMPQ 343


>gi|187925302|ref|YP_001896944.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
           PsJN]
 gi|229890466|sp|B2SYI5|MIAB_BURPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187716496|gb|ACD17720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
           PsJN]
          Length = 457

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++       +L
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRAGLTL 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTEIADFAQLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 KYDTSFSFIYSPRPGTPAANLH 352


>gi|160937836|ref|ZP_02085195.1| hypothetical protein CLOBOL_02728 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439275|gb|EDP17028.1| hypothetical protein CLOBOL_02728 [Clostridium bolteae ATCC
           BAA-613]
          Length = 612

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 84/247 (34%), Gaps = 26/247 (10%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAA---IH 162
              E     ++    +   +   G+ ++ +GVQS    +L+ + R  +  E       I+
Sbjct: 298 FHFEIAADLLDQEEIELLGQMRPGLVQLEIGVQSTNPDTLKAIHRKTDIDEIRRITGTIN 357

Query: 163 LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---H 219
            A N+      DLI  LP + +  +     +  S   + L L  L + KG+   +M   +
Sbjct: 358 QAHNVHQH--LDLIAGLPNENLESFRHSFNQVYSMEPEQLQLGFLKVLKGSYMEEMALTY 415

Query: 220 KDGDLVLPSENVAVDLYNLTQSITS----AHGLHAYEISN---HSFLGAESLHNLNYWRY 272
                  P   V    +   + I            Y  S    H+  G  + +   Y  +
Sbjct: 416 GLCYSSRPPYEVLSTRWLSYRDILELKGVEDMTEVYYNSRQFVHTLSGLAAEYGSPYEMF 475

Query: 273 GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLM 332
            D       A    +     ++ S     E    ++ +   A ++    S  ++  + LM
Sbjct: 476 LDM------AAYYRENNLTGISHSRIARYEILYSIIARRRDAGLDA---SVMERFRDLLM 526

Query: 333 MGLRLRE 339
             L LRE
Sbjct: 527 YDLYLRE 533


>gi|33592184|ref|NP_879828.1| hypothetical protein BP1041 [Bordetella pertussis Tohama I]
 gi|81578782|sp|Q7VZ86|MIAB_BORPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33571829|emb|CAE41341.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332381601|gb|AEE66448.1| hypothetical protein BPTD_1035 [Bordetella pertussis CS]
          Length = 447

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    L       Q     ++   +   + G      E 
Sbjct: 153 CSKYCSFCVVPYTRGEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMGDSGEI 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A++L+ + +   +      T  ++P  +       Y +    V+ + L VQ+  ++ 
Sbjct: 213 ADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRV 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R + A E  + +   R   P ++   D I   P +T   ++  ++       D  
Sbjct: 271 LAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFIVGFPGETEEDFQKTMKLIEDVGFDTS 330

Query: 203 SLYQLTIEKGTLFYKMH 219
             +  +   GT    +H
Sbjct: 331 FSFVYSRRPGTPAADLH 347


>gi|33600343|ref|NP_887903.1| hypothetical protein BB1357 [Bordetella bronchiseptica RB50]
 gi|81431747|sp|Q7WMN3|MIAB_BORBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33567942|emb|CAE31855.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 475

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    L       Q     ++   +   + G      E 
Sbjct: 181 CSKYCSFCVVPYTRGEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMGDSGEI 240

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A++L+ + +   +      T  ++P  +       Y +    V+ + L VQ+  ++ 
Sbjct: 241 ADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRV 298

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R + A E  + +   R   P ++   D I   P +T   ++  ++       D  
Sbjct: 299 LAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFIVGFPGETEEDFQKTMKLIEDVGFDTS 358

Query: 203 SLYQLTIEKGTLFYKMH 219
             +  +   GT    +H
Sbjct: 359 FSFVYSRRPGTPAADLH 375


>gi|325201495|gb|ADY96949.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M01-240149]
 gi|325207475|gb|ADZ02927.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           NZ-05/33]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 332 LSFVFIYSPRPGTPAANLH 350


>gi|269958944|ref|YP_003328733.1| putative 2-methylthioadenine synthetase [Anaplasma centrale str.
           Israel]
 gi|269848775|gb|ACZ49419.1| putative 2-methylthioadenine synthetase [Anaplasma centrale str.
           Israel]
          Length = 463

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C     V  Y  G E + +S    +  +R+L    +   +
Sbjct: 142 SRGVSAFVSVQEGCDKFCTFC-----VVPYTRGPE-YSRSVEDVLAEVRKLADGGTKEVV 195

Query: 75  FFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             G    +          ++  ++  +A+   +      T  ++P  +  + +  ++   
Sbjct: 196 LLGQNVNAYHGTYKGNEWDLGRLIRKVAEVDGIERIRYTT--SHPRDMHSSLYDAHKHEP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
             +  + L VQS  +  LR + R H+  E +  I   +     +  S D I   P +T  
Sbjct: 254 KLLPCVHLPVQSGSDSVLRKMNRKHSVQEYMDIIDTLKEARSDIALSSDFIVGFPGETEE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +E  +             ++ +   GT 
Sbjct: 314 DFEATMDLVRHVGFATSYSFKYSPRPGTP 342


>gi|238758019|ref|ZP_04619200.1| hypothetical protein yaldo0001_8970 [Yersinia aldovae ATCC 35236]
 gi|238703773|gb|EEP96309.1| hypothetical protein yaldo0001_8970 [Yersinia aldovae ATCC 35236]
          Length = 482

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 75/224 (33%), Gaps = 14/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F                  L E+  +    G R +     ++    G    
Sbjct: 165 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGATYE 220

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  + A +L  +A    +      T  ++P     +  + YR     V+ + L VQS  
Sbjct: 221 GDTCSFAELLRLVAAIDGIDRIRFTT--SHPIEFTDDIIEVYRDTPELVSFLHLPVQSGS 278

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       
Sbjct: 279 DRILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTMKLVADIGF 338

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           D    +  +   GT   ++  D       + + +    +TQ   
Sbjct: 339 DTSYSFIYSPRPGTPAAELPDDVSEEEKKQRLHILQQRITQQAM 382


>gi|238577268|ref|XP_002388334.1| hypothetical protein MPER_12655 [Moniliophthora perniciosa FA553]
 gi|215449519|gb|EEB89264.1| hypothetical protein MPER_12655 [Moniliophthora perniciosa FA553]
          Length = 333

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 56/164 (34%), Gaps = 13/164 (7%)

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
           + ++ L            GG  + +              +  +S    + ++        
Sbjct: 153 EQLKSLGHNVDKVEFIIMGG--TFMSMPEDYRAKFVAQLHNALSGFTGLDVD-------- 202

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                  + G  R+ +GVQS+ E   R   R H       +  LA++   ++   ++  L
Sbjct: 203 EAVSQMLRYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFLLAKDAGFKVVAHMMPDL 262

Query: 180 PKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHK 220
           P   + +   + +       +  D L +Y   + +GT  Y++ +
Sbjct: 263 PNVGLERDLEQFKEYFESPAFRSDGLKIYPTLVIRGTGLYELWR 306


>gi|220926895|ref|YP_002502197.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium nodulans ORS 2060]
 gi|219951502|gb|ACL61894.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium nodulans ORS 2060]
          Length = 479

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 73/228 (32%), Gaps = 10/228 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   +   + E+++  +               T +L   +
Sbjct: 206 CKSRCTFCLWPQTVG-GHTYRTRSVGHVIEEIKYCLKAFPQTKEFFFDDDTFTDNLPRAE 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  R  G+  + +G +S  +Q L  
Sbjct: 265 EIARELGKLGVTWSCNAKA---------NVPRETLKVLRDNGLRLLLVGYESGNQQILHN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +    I  LP +T    +  ++ A       + +   
Sbjct: 316 IKKGMRVEVAERFTKDCHDLGIAIHGTFILGLPGETKETIQETIKFATRINPHTIQVSLA 375

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               GT  YK   +   +  +    VD   +  +      L   EI N
Sbjct: 376 APYPGTFLYKQAVENGWLDEANAELVDENGVQIAPLHYPHLSHTEIFN 423


>gi|66047572|ref|YP_237413.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. syringae B728a]
 gi|75500577|sp|Q4ZN97|MIAB_PSEU2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|63258279|gb|AAY39375.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Pseudomonas syringae pv. syringae B728a]
 gi|330953005|gb|EGH53265.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae Cit 7]
 gi|330969456|gb|EGH69522.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|210612715|ref|ZP_03289430.1| hypothetical protein CLONEX_01632 [Clostridium nexile DSM 1787]
 gi|210151408|gb|EEA82416.1| hypothetical protein CLONEX_01632 [Clostridium nexile DSM 1787]
          Length = 298

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 67/191 (35%), Gaps = 16/191 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----LIEPQ 87
           C YC     +  Y  G+E   ++    ++ +  L     +  +  G    S    L +P 
Sbjct: 21  CSYC-----IVPYVRGRERS-RNPKDIIREIEALVADGVMEVMLLGQNVNSYGKNLDDPM 74

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
             A +L  I K   +       + ++P  +     +  R +      + L VQS   + L
Sbjct: 75  TFAELLQEIEKIEGLERIRF--MTSHPKDLSDELIEVMRHSKKICKHLHLPVQSGSTEIL 132

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++   + +  +   +   P +S   D+I   P +T   +   +        D   
Sbjct: 133 KKMNRHYTKEQYLELVRKIKEAVPDISLTTDIIVGFPGETEEDFLETMDVVKKVRYDSAF 192

Query: 204 LYQLTIEKGTL 214
            +  +   GT 
Sbjct: 193 TFIYSKRTGTP 203


>gi|167758192|ref|ZP_02430319.1| hypothetical protein CLOSCI_00530 [Clostridium scindens ATCC 35704]
 gi|167664089|gb|EDS08219.1| hypothetical protein CLOSCI_00530 [Clostridium scindens ATCC 35704]
          Length = 492

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E         ++ + +L     +  +  G    S    L
Sbjct: 211 CNNFCSYC-----IVPYVRGRERSRDP-KAIIREIERLVADGVVEVMLLGQNVNSYGKNL 264

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  I K   +       + ++P  +     +    +      + L +QS  
Sbjct: 265 EEPMSFARLLTEIEKIEGLERIRF--MTSHPKDLSDELIEVMGNSKKICKHLHLPIQSGS 322

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +  +   R   P +S   D+I   P +T   ++  L        
Sbjct: 323 SRILEKMNRRYTKEQYLTLVDKIRKAVPDISLTTDIIVGFPGETEEDFQETLDVVRKVRY 382

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 383 DSAFTFIYSKRTGTPAAAM 401


>gi|157376603|ref|YP_001475203.1| 2-alkenal reductase [Shewanella sediminis HAW-EB3]
 gi|229890656|sp|A8FZ02|MIAB_SHESH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157318977|gb|ABV38075.1| 2-alkenal reductase [Shewanella sediminis HAW-EB3]
          Length = 474

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  +    G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDIILEIAQLADQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     +     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 DEICTFAELLRYVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P ++   +   ++       DH
Sbjct: 273 ILTQMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGESKQDFADTMKLIEDVQFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D  L    E +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVTLAEKKERLAILQDRITQQAMRY 376


>gi|315648053|ref|ZP_07901154.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
           vortex V453]
 gi|315276699|gb|EFU40042.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
           vortex V453]
          Length = 519

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +  +R+L           G    +  +  
Sbjct: 228 CDKFCTYC-----IVPYTRGKERS-RRPEDVIAEVRELARQGYKEITLLGQNVNAYGKDF 281

Query: 87  QNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I     D +     +         ++P   + +  +   K G  V  I L VQS   Q
Sbjct: 282 EDIEYRFGDLMDAIHKIDIPRVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSGSSQ 341

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +   H  +   P ++F  D+I   P +T  Q+E  L        D 
Sbjct: 342 VLKKMSRKYTRETYLELAHKIKKAIPNVAFTTDIIVGFPGETDEQFEETLSLVREVGYDA 401

Query: 202 LSLYQLTIEKGTLFYKM 218
              +  +  +GT    M
Sbjct: 402 AYTFIYSPREGTPAAVM 418


>gi|71735074|ref|YP_276503.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|289625797|ref|ZP_06458751.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648418|ref|ZP_06479761.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|123635051|sp|Q48DN8|MIAB_PSE14 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71555627|gb|AAZ34838.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|330867193|gb|EGH01902.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330871081|gb|EGH05790.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330987620|gb|EGH85723.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|323488396|ref|ZP_08093643.1| hypothetical protein GPDM_03600 [Planococcus donghaensis MPA1U2]
 gi|323397903|gb|EGA90702.1| hypothetical protein GPDM_03600 [Planococcus donghaensis MPA1U2]
          Length = 317

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 66/206 (32%), Gaps = 21/206 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFF 76
           C  +        C +C     V        + + S   +   +++    +   +    +F
Sbjct: 40  CPNRDGTVAHGGCTFCS----VAGSGDFAGDRVDSISEQFDQIKEKMHRKWKDAKYMAYF 95

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +      I    +   +   V   + ++I   P  +  +      +        +
Sbjct: 96  QAYTNTHAPLPVIKEKFEAALEQENV---IGLSIATRPDCLPDDVVDYLAELNERTYLWV 152

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++ E++   + R H+    +  +   R    R+   +I  LP +           
Sbjct: 153 ELGLQTVHERTALLVNRAHDFDAYVEGVTKLRKRGIRVCTHIINGLPLEDRDMMMETACE 212

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                V  + ++ L + KGT   K +
Sbjct: 213 VAKLDVQGIKIHLLHLLKGTPMVKQY 238


>gi|320322684|gb|EFW78777.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320330531|gb|EFW86510.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330873660|gb|EGH07809.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|319408022|emb|CBI81676.1| bifunctional enzyme [Bartonella schoenbuchensis R1]
          Length = 458

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 5/139 (3%)

Query: 90  ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSLEEQSLR 146
             + D +     +     +     +P  ++ +    +R   +    + L VQS  ++ L+
Sbjct: 234 WRLGDLLYHLAKLDGLKRLRYTTSHPRDMDDSLIAAHRDLDMLMPYLHLPVQSGSDRILK 293

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R H +   +  I   R   P ++F  D I   P +T   +E  ++            
Sbjct: 294 AMNRQHKSIHYLKLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKLIKQVGYSSAYS 353

Query: 205 YQLTIEKGTLFYKMHKDGD 223
           ++ +   GT    M    D
Sbjct: 354 FKYSPRPGTPGATMKNHVD 372


>gi|298489005|ref|ZP_07007028.1| tRNA-i(6)A37 methylthiotransferase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156503|gb|EFH97600.1| tRNA-i(6)A37 methylthiotransferase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|282883004|ref|ZP_06291606.1| biotin synthase [Peptoniphilus lacrimalis 315-B]
 gi|281297142|gb|EFA89636.1| biotin synthase [Peptoniphilus lacrimalis 315-B]
          Length = 342

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 71/194 (36%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N + +R ++ +E+ ++          +      I ++   GG     
Sbjct: 61  CKNNCYYCGLRSDNKNTQRIRLKKEDILK--------RAEAGYKMGIRTLVMQGGEDPFY 112

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  I+  +     +  ++ IT+          +F+ +++AG +R  L  ++ +   
Sbjct: 113 TKDYMVDIIKSLK---NIYPDIAITLSLGERPF--EDFKAFKEAGADRYLLRHETYDRDH 167

Query: 145 LRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            + L  R  +    I  ++  +++  +    ++   P Q +     +L+  L      + 
Sbjct: 168 YQALHPREMSFDNRIECLYNLKSLGFQTGCGMMIGSPYQKIENVYKDLELILKLKPQMVG 227

Query: 204 LYQLTIEKGTLFYK 217
           L     +K + F  
Sbjct: 228 LGPFIAQKDSPFNN 241


>gi|254670995|emb|CBA07742.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 430

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 145 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 199

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 200 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 259

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 260 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 319

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 320 LSFVFIYSPRPGTPAANLH 338


>gi|222055074|ref|YP_002537436.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32]
 gi|221564363|gb|ACM20335.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32]
          Length = 438

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 76/213 (35%), Gaps = 14/213 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLI 84
           C   C YC     +  Y  G+   +  +  L  ++   +      + + I  G     L 
Sbjct: 156 CDAFCSYC-----IVPYARGRSRSVSLEEALAGIRTFAERGFKEVVLTGIHLGAYGLDLN 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            P ++  +L+   K   V      ++E  P+ V         K+      + + +QS  +
Sbjct: 211 PPLSLLDLLNAAEKERLVERIRIGSVE--PTEVSDALISFLAKSATVCPHLHIPLQSGHD 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + RN++ ++  + +       P +    D+I   P +T  +++   +   S  + 
Sbjct: 269 RVLKAMNRNYSTADFRSVMEKLDTDLPSICIGTDIITGFPGETDDEFQDGYRFLESLPLA 328

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           +  ++  +   GT    M       +  E    
Sbjct: 329 YFHVFPFSPRSGTPAATMEGHVHSSVIKERAKA 361


>gi|325133510|gb|EGC56173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M13399]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 332 LSFVFIYSPRPGTPAANLH 350


>gi|312127450|ref|YP_003992324.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777469|gb|ADQ06955.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 471

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 16  SNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
              +  +V+  + C   C YC            +    +  + E++ + Q  G + ++ +
Sbjct: 178 KQGVSAFVNIIYGCNNFCSYC---IVPYVRGRERSRRPEEIVYEIEQLAQ-NGVKEVTLL 233

Query: 75  FFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG- 129
             G    S    L +      +L+ + +   +     +T  ++P  +        R    
Sbjct: 234 --GQNVNSYGKDLGDGITFPKLLEKVNEIKGIERIRFVT--SHPKDLSDELIVAMRDLEK 289

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               I L VQS   + L+ + R++   + +  I   +   P ++   D+I   P +T   
Sbjct: 290 VCEHIHLPVQSGSTRILKAMNRHYTKEDYLRLIEKLKTNIPDIAITTDIIVGFPGETDED 349

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +E  L        D    +  +  +GT   KM   
Sbjct: 350 FEDTLDVCRKVEFDSAYTFIYSKRRGTPAEKMPNQ 384


>gi|303245577|ref|ZP_07331860.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302492840|gb|EFL52705.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 306

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 51/157 (32%), Gaps = 2/157 (1%)

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFL 148
            +   + +   +     + +   P  ++           +  + L  G+QS+ + +L  +
Sbjct: 96  RLEGLLGELIALPGVCGLCLGTRPDCLDAEKTALLAAVPLPYVCLDLGLQSVRDATLTRI 155

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+A+    A         R++  L+  LP ++   +   +       V  +  +   
Sbjct: 156 NRGHDAAAFALAARGTAEAGLRVTAHLMAGLPGESNADFWAAVSFINDLPVTGVKFHNTL 215

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +  G+   ++   G  V P     V       +    
Sbjct: 216 VVAGSSLAELFAAGGYVPPGRETYVAAVAEAIARLRP 252


>gi|121634220|ref|YP_974465.1| hypothetical protein NMC0353 [Neisseria meningitidis FAM18]
 gi|229890576|sp|A1KS33|MIAB_NEIMF RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120865926|emb|CAM09663.1| hypothetical protein NMC0353 [Neisseria meningitidis FAM18]
 gi|254672658|emb|CBA06484.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|261393205|emb|CAX50824.1| putative MiaB-like tRNA modification enzyme [Neisseria meningitidis
           8013]
 gi|308389965|gb|ADO32285.1| hypothetical protein NMBB_2129 [Neisseria meningitidis alpha710]
 gi|325204821|gb|ADZ00275.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M01-240355]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 332 LSFVFIYSPRPGTPAANLH 350


>gi|329847216|ref|ZP_08262244.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Asticcacaulis biprosthecum C19]
 gi|328842279|gb|EGF91848.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Asticcacaulis biprosthecum C19]
          Length = 517

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 81/232 (34%), Gaps = 12/232 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +++                + +L     +    F    P+    +
Sbjct: 202 CPHPCNYCGQRGFWTQWRHRNPE------RFAAEIARLHRDHGVEVFNFADENPT--SSK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +            VS  +  +  A+    + ++   Y++AGV R  +G+++ +E  L  
Sbjct: 254 KMWKRFLEALIAEKVSVTLVGSTRADDIVRDRDHLHLYKQAGVERFLMGMENTDEAVLSK 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  + +    AI L R          +    ++T   +  +L++ L+Y  D +    +
Sbjct: 314 IRKGGSTTTDREAIRLMRQHGMLSMATWVVGFEEETDRDYWRQLRQLLAYDPDQIQSVYV 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           T  + T F+ + K  +++   +      ++    + +   +  + +      
Sbjct: 374 TPHRWTPFFGLAKGREVIQTDQ----SKWDYKHQVLATRHVPPWRVFVWVKA 421


>gi|300868939|ref|ZP_07113544.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Oscillatoria sp. PCC 6506]
 gi|300333062|emb|CBN58736.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Oscillatoria sp. PCC 6506]
          Length = 452

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 15/233 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          + Q    ++   EM+ + +  G + ++ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGIEQSRTPKAIRAEMEELGRQ-GYKEVTLLGQNIDAYGRDLPG 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  N   + D +     V     I     +P        +   +         +  Q
Sbjct: 213 TKPDGSNQYTLTDLLYYVSDVPGIERIRFATSHPRYFTERLIKACAELPQVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I   R   P   +S D I   P ++  Q+E  L   + 
Sbjct: 273 SGDNDILKAMARGYTQEKYRRIIETIRQYMPDASISADAIVGFPGESEAQFEKTLNLVVD 332

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              D ++    +   GT            + ++ +    + +TQ+       +
Sbjct: 333 MRFDLVNTAAYSPRPGTPAALWDTQLSEEVKADRLQRLNHVVTQTAMERSQRY 385


>gi|291535169|emb|CBL08281.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis M50/1]
          Length = 435

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 75/203 (36%), Gaps = 20/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTP--S 82
           C + C YC            +   ++  L E++ + +      + +   +   G     +
Sbjct: 154 CNQFCSYC---IIPFARGRVRSRKMEDVLNEIKGLAKSGYKEVVLTGIHLSSYGVDTGET 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L+       +++ + +   +      ++E  P  V  +  +   +         L +QS 
Sbjct: 211 LLS------LIEHVHEIEGIERIRLGSLE--PRIVTEDFAKRLSELTKICPHFHLSLQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R ++ +E  A   L R  F    ++ D+I   P +T  ++++  +      
Sbjct: 263 CDSVLKRMNRRYDTAEYEAGCDLLRKYFTHPAITTDVIVGFPGETEEEFKITEEYLKKIH 322

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
              + +++ ++ +GT    M   
Sbjct: 323 FYEMHIFKYSVREGTKAAVMPDQ 345


>gi|257482205|ref|ZP_05636246.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 442

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|257467848|ref|ZP_05631944.1| MIAB protein [Fusobacterium ulcerans ATCC 49185]
 gi|317062137|ref|ZP_07926622.1| tRNA 2-methylthioadenosine synthase [Fusobacterium ulcerans ATCC
           49185]
 gi|313687813|gb|EFS24648.1| tRNA 2-methylthioadenosine synthase [Fusobacterium ulcerans ATCC
           49185]
          Length = 436

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 21/226 (9%)

Query: 7   YENNMTGQGSNSLGV-YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            + +   + + S+ + Y     C   C YC     +  Y  G+E  +      +  ++Q 
Sbjct: 136 LDADFDSKKTASISITY----GCNNFCTYC-----IVPYVRGRERSVP-LDEIIHDVKQY 185

Query: 66  TGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                   I  G    S         N A +L+ I K       +   I  +P       
Sbjct: 186 AEKGYKEIILLGQNVNSYGKDFKNGDNFAKLLEEICKVEG--DFLVRFISPHPRDFSDEV 243

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
                K       + L +QS   + L+ + R +   + IA     +   P ++   D+I 
Sbjct: 244 IDVIAKNDKIAKSLHLPLQSGSTRILKMMNRGYTKEQYIALAEKIKERIPGVALTADIIV 303

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             P +T   +   L        ++  ++  +I +GT   +M +  D
Sbjct: 304 GFPGETEEDFLDTLDVVKRIQFENSFMFMYSIRQGTKAAEMDEQID 349


>gi|170747406|ref|YP_001753666.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653928|gb|ACB22983.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium radiotolerans JCM 2831]
          Length = 477

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   +   + E+++  +               T +L   +
Sbjct: 206 CKSRCTFCLWPQTVG-GHTYRTRSVAHVIEEIKYCLKEFPQTKEFFFDDDTFTDNLPRAE 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  ++ G+  + +G +S  +Q L  
Sbjct: 265 EIARELGKLGVTWSCNAKA---------NVPRETLKVLKENGLRLLLVGYESGNQQILHN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +    I  LP +T    +  +  A       + +   
Sbjct: 316 IKKGMRVEVAEKFTKDCHDLGIAIHGTFILGLPGETKETIQETIAFAKRINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  YK 
Sbjct: 376 APYPGTFLYKQ 386


>gi|42527391|ref|NP_972489.1| MiaB-like tRNA modifying enzyme [Treponema denticola ATCC 35405]
 gi|41817976|gb|AAS12400.1| MiaB-like tRNA modifying enzyme [Treponema denticola ATCC 35405]
          Length = 468

 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-------GGGT 80
           C   C YC     + R         ++    +Q  +       +S +          GG 
Sbjct: 192 CNNACAYC--RIRLARGTSVSLPAEEAVRRIVQIEKNGAAEVVLSGVNLSQYRDETYGGF 249

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQS 139
            +L+     A +L+   K     S         P  V+    +      +     L +QS
Sbjct: 250 ANLL-----AKLLENTKKIRLRIS------SMYPECVDDGILEIVANKRICPHFHLSIQS 298

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R +  ++   AI+  R       +  D+I   P +T   +    +     
Sbjct: 299 GSDKILKAMNRPYREADIRMAINNLRKAKDNPFIGCDIITGFPSETEEDFLQTFKMCEDL 358

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            +  + ++  +   GT  + M  
Sbjct: 359 KIPGIHVFPFSARPGTKAFSMRP 381


>gi|253681530|ref|ZP_04862327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum D
           str. 1873]
 gi|253561242|gb|EES90694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum D
           str. 1873]
          Length = 447

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 20/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E         +  ++ L           G    S    L
Sbjct: 166 CNNFCSYC-----IVPYVRGRERSRDP-QNIVDEIKDLVSKGYKEITLLGQNVNSYGKGL 219

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           I   N A +L  + K   +       + ++P  V     +   +      +    +QS  
Sbjct: 220 IPEINFADLLRMVNKIEGLERIRF--MTSHPKDVSDELIKAMAECEKVCEQGHFALQSGS 277

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +  +   R   P +    D+I   P +T   +E  L        
Sbjct: 278 TKILEKMNRKYTREDYLNLVKKLRVAMPNIGISTDIIVGYPGETEEDFEETLSIVKEIEF 337

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           D    +  +  +GT   K     +  +P +        L ++I       
Sbjct: 338 DSAFTFIYSKREGTPAAK----HEDQVPDDVKHARFNRLVEAINEIMARK 383


>gi|188534464|ref|YP_001908261.1| Putative tRNA-thiotransferase [Erwinia tasmaniensis Et1/99]
 gi|188029506|emb|CAO97383.1| Putative tRNA-thiotransferase [Erwinia tasmaniensis Et1/99]
          Length = 480

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 74/236 (31%), Gaps = 26/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C +C       R +              Q   Q  G R ++ +           F 
Sbjct: 163 CNKYCTFC--VVPYTRGEEVSRPSDDILFEVAQLAAQ--GVREVNLLGQNVNAYRGETFD 218

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG   +     +  ++  I        +      ++P     +    YR     V+ + L
Sbjct: 219 GG---ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFNDDIIDVYRDTPELVSFLHL 270

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + R H A E  A I   LA     ++S D I   P +T   +E  ++ 
Sbjct: 271 PVQSGADRILTLMKRAHTALEYKAIIRKLLAARPNIQISSDFIIGFPGETQADFEQTMKL 330

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                 D    +  +   GT    +  D       + + +    + Q  T+     
Sbjct: 331 IGEINFDISYSFIYSARPGTPAADLPDDVSEDEKKQRLYILQDRINQQTTAWSRRK 386


>gi|57867202|ref|YP_188892.1| hypothetical protein SERP1320 [Staphylococcus epidermidis RP62A]
 gi|293366299|ref|ZP_06612979.1| radical SAM protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|57637860|gb|AAW54648.1| conserved hypothetical protein TIGR01212 [Staphylococcus
           epidermidis RP62A]
 gi|291319537|gb|EFE59903.1| radical SAM protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329737510|gb|EGG73763.1| radical SAM protein, TIGR01212 family [Staphylococcus epidermidis
           VCU045]
          Length = 317

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 69/214 (32%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   +   I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRAEPIEVQFKKIKERMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K       V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKE---DGVVGLSIATRPDCLPDDVVEYLAELNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQSTSDLINRAHDMQTYYDGVTKLRKHNINVCTHIINGLPGENYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S+ 
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQQ 249


>gi|21224132|ref|NP_629911.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Streptomyces
           coelicolor A3(2)]
 gi|81344644|sp|O69963|MIAB_STRCO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|2995295|emb|CAA18324.1| conserved hypothetical protein SC4H2.08 [Streptomyces coelicolor
           A3(2)]
          Length = 505

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 142 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 199

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 200 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNIDGLERVRF--TSPHPRDFTDD 257

Query: 121 NFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      ++ D+I
Sbjct: 258 VIAAMAETPNAMPQLHMPLQSGSDPVLKAMRRSYRQERYLGIIEKVRAAIPHAAITTDII 317

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 318 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 359


>gi|88706675|ref|ZP_01104378.1| magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
           [Congregibacter litoralis KT71]
 gi|88699171|gb|EAQ96287.1| magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
           [Congregibacter litoralis KT71]
          Length = 563

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       ++K  ++  ++  +  +  + +L     +         P++   +
Sbjct: 204 CPFTCSFCS------QWKFWRDYRVRDPIKVVDEIEKLVNEHDVGFFILADEEPTINRKK 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            I    + I +   +   ++  I    + +  +      YR+AG+  +SLG ++  +  L
Sbjct: 258 FIEFCEELIRR--GLPDRIKWGINTRVTDILRDEALLPLYRRAGLVHVSLGTEAAAQMKL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     +   AI L R     +    I  L  +T    E   Q A  +  D  +  
Sbjct: 316 DQFNKETKVEDNKRAIQLLREADILIEAQFIVGLDNETPETLEETYQMAWEWQPDLANWA 375

Query: 206 QLTIEKGTLFYK 217
             T    T  ++
Sbjct: 376 MYTPWPFTPLFQ 387


>gi|308186037|ref|YP_003930168.1| UPF0004 protein [Pantoea vagans C9-1]
 gi|308056547|gb|ADO08719.1| UPF0004 protein [Pantoea vagans C9-1]
          Length = 506

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 60/197 (30%), Gaps = 8/197 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +          L   Q   Q     ++          +  + +
Sbjct: 189 CNKYCTFC--VVPYTRGEEVSRPSDDILLEIAQLAAQGVREVNLLGQNVNAYRGATFDGE 246

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I    + +     +     I     +P     +    YR     V+ + L VQS  ++ 
Sbjct: 247 -ICTFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGADRI 305

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E  A I    A      +S D I   P +T   +E  ++       D  
Sbjct: 306 LTLMKRAHTALEYKAIIRKLRAARPDIEISSDFIIGFPGETQQDFEQTMKLIADINFDVS 365

Query: 203 SLYQLTIEKGTLFYKMH 219
             +  +   GT    + 
Sbjct: 366 FSFIYSARPGTPAADLP 382


>gi|257083714|ref|ZP_05578075.1| radical SAM superfamily enzyme [Enterococcus faecalis Fly1]
 gi|256991744|gb|EEU79046.1| radical SAM superfamily enzyme [Enterococcus faecalis Fly1]
          Length = 322

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPEEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|256964372|ref|ZP_05568543.1| radical SAM superfamily enzyme [Enterococcus faecalis HIP11704]
 gi|307271403|ref|ZP_07552678.1| radical SAM protein family [Enterococcus faecalis TX0855]
 gi|256954868|gb|EEU71500.1| radical SAM superfamily enzyme [Enterococcus faecalis HIP11704]
 gi|306511935|gb|EFM80930.1| radical SAM protein family [Enterococcus faecalis TX0855]
          Length = 322

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHASVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|254479226|ref|ZP_05092571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium
           pacificum DSM 12653]
 gi|214034827|gb|EEB75556.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium
           pacificum DSM 12653]
          Length = 471

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +     +  +++L           G    S    +
Sbjct: 186 CNNFCTYC-----IVPYTRGREKS-RRPEDIIAEVKELAEKGYKEITLLGQNVNSY--GK 237

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++   ++     + ++    I     + ++P  +        R        + L VQ+  
Sbjct: 238 DLGGDINFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEHLHLPVQAGS 297

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  I   R   P ++   D+I   P +T   +   L        
Sbjct: 298 NKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDIIVGFPGETEEDFLQTLDLVERVRF 357

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    +  +   GT    M    D
Sbjct: 358 DGAYTFMYSKRAGTPAASMPDQVD 381


>gi|11500026|ref|NP_071276.1| Fe-S oxidoreductase [Archaeoglobus fulgidus DSM 4304]
          Length = 306

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 14/233 (6%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ--N 88
           +C +C     ++     +E+     L ++  + +   P    + F G   P LI P    
Sbjct: 29  RCAFCAMYKGMKFELRKKED----VLRDIDSIPKYFPPS--RTAFIGDSNP-LIHPDIAE 81

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I   L    K     +          + +  +  +  ++AG+ R+ +G++S + + L  +
Sbjct: 82  IVRYLREKRKEVERVTAYARIKTI--AKMPESRLEELKEAGLTRLHMGLESGDREVLELV 139

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQ 206
            +     +AI A   AR  F  +++ ++  L    ++        +         + L  
Sbjct: 140 QKGITPEDAITAGKKARKYF-ELTYYVMPGLGGRERSEQHAVNTARVINKAQPTFVRLRT 198

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           LT+ +GT   K+      +L       ++  L + I     L +  +SN+ F 
Sbjct: 199 LTVIEGTPIEKLVGKEITLLGPVEQLEEVRRLVEEIKVETLLLSDHVSNYLFT 251


>gi|27468351|ref|NP_764988.1| hypothetical protein SE1433 [Staphylococcus epidermidis ATCC 12228]
 gi|251811141|ref|ZP_04825614.1| conserved hypothetical radical SAM protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|27315897|gb|AAO05032.1|AE016748_266 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|251805361|gb|EES58018.1| conserved hypothetical radical SAM protein [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|319401066|gb|EFV89285.1| radical SAM superfamily protein [Staphylococcus epidermidis FRI909]
 gi|329737121|gb|EGG73375.1| radical SAM protein, TIGR01212 family [Staphylococcus epidermidis
           VCU028]
          Length = 317

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 69/214 (32%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   +   I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRAEPIEVQFKKIKERMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K       V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKE---DGVVGLSIATRPDCLPDDVVEYLAELNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQSTSDLINRAHDMQTYYDGVTKLRKHNINVCTHIINGLPGENYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S+ 
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQQ 249


>gi|289522346|ref|ZP_06439200.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289504182|gb|EFD25346.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 453

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 64/204 (31%), Gaps = 26/204 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +  F+ +     ++ + +L     +     G         
Sbjct: 159 CDNFCTYC-------IVPYVRGRFVSRRPGEILKEVSELVDDGVLEVTLLGQNV------ 205

Query: 87  QNIALILDGIAKNWTVSSNVEIT--------IEANPSSVEVNNFQGYRKAG--VNRISLG 136
            +    L    +   +  +V             ++P     +  +   +       ++L 
Sbjct: 206 DSYGKDLKESYRFSNLLQDVAKVPGLLRVRFTTSHPRDFTEDVIEAMAEESKICPAVNLP 265

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +QS  ++ L+ + R +   +    I   R   P +S   DLI   P +T   ++  L+  
Sbjct: 266 IQSGSDRILKKMNRGYTVEDYGRIIKRLREALPEVSITSDLIVGFPGETEEDFQCTLEML 325

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
            +   D +     +  +GT    M
Sbjct: 326 KTMEFDLVHTASYSPREGTPAANM 349


>gi|254804310|ref|YP_003082531.1| putative 2-methylthioadenine synthetase [Neisseria meningitidis
           alpha14]
 gi|254667852|emb|CBA03889.1| putative 2-methylthioadenine synthetase [Neisseria meningitidis
           alpha14]
 gi|325131508|gb|EGC54215.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M6190]
 gi|325139238|gb|EGC61784.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           ES14902]
          Length = 442

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|218132529|ref|ZP_03461333.1| hypothetical protein BACPEC_00388 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992639|gb|EEC58641.1| hypothetical protein BACPEC_00388 [Bacteroides pectinophilus ATCC
           43243]
          Length = 484

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +  L     +  +  G    S    L
Sbjct: 201 CNNFCSYC-----IVPYVRGRERS-REPKDIIREIESLVADGVVEVMLLGQNVNSYGRSL 254

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  I K   +       +  +P  +     +  + +    N + L +QS  
Sbjct: 255 ETPVTFAQLLQEIEKIDGLERIRF--MTPHPKDLSDELIEVMKNSKKICNHVHLPLQSGS 312

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++     +  +   R   P +S   D+I   P++T   +   +        
Sbjct: 313 SRILKLMNRHYTKEHYLELVEKIRREIPDVSITTDIIVGFPQETEEDFLETMDVVEKAQY 372

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           +    +  +   GT    M
Sbjct: 373 ESAYTFIYSKRTGTPAASM 391


>gi|167037585|ref|YP_001665163.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|320116000|ref|YP_004186159.1| MiaB family RNA modification protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389400|ref|ZP_08210967.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
           ethanolicus JW 200]
 gi|229891015|sp|B0K9L4|MIAB_THEP3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|166856419|gb|ABY94827.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929091|gb|ADV79776.1| RNA modification enzyme, MiaB family [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994405|gb|EGD52830.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 471

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
             +  +  ++L  +V+  + C   C YC     +  Y  G+E   +     +  +++L  
Sbjct: 166 EELPVKRDSNLKAWVNIIYGCNNFCTYC-----IVPYTRGREKS-RKPEDIIAEVKELAQ 219

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQ 123
                    G    S    +++   +      + ++    I     + ++P  +      
Sbjct: 220 KGYKEITLLGQNVNSY--GKDLDEDITFAKLLYKLNDIEGIERIRFMTSHPKDISDELIY 277

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             R        + L VQ+   + L+ + R +     +  I   R+  P ++   D+I   
Sbjct: 278 AIRDLDKVCEHLHLPVQAGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGF 337

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           P +T   +   L        D    +  +   GT+   M    D  +  E +  
Sbjct: 338 PGETEEDFLETLDLVERVRFDAAYTFIYSKRAGTVAANMPDQVDDAVKHERLER 391


>gi|261365367|ref|ZP_05978250.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria mucosa ATCC
           25996]
 gi|298369521|ref|ZP_06980838.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria sp. oral taxon
           014 str. F0314]
 gi|288566157|gb|EFC87717.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria mucosa ATCC
           25996]
 gi|298282078|gb|EFI23566.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 442

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----ME 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|149201068|ref|ZP_01878043.1| Magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66
           kDa subunit(bchE) [Roseovarius sp. TM1035]
 gi|149145401|gb|EDM33427.1| Magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66
           kDa subunit(bchE) [Roseovarius sp. TM1035]
          Length = 553

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 28/271 (10%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  ++     +  +  L    
Sbjct: 186 YIYVPLGKRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIENLVNNH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++ + + +    + IA++        I         + +  + YRKAG
Sbjct: 240 GVGFFILADEEPTINKKKFVQFCEELIARDLPRRVQWGINTRVTDIYRDRDLLKFYRKAG 299

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +    ++   AI L R          I  L  +T    E 
Sbjct: 300 LVHVSLGTEAAAQLKLDQFNKETTVAQNKEAIQLLREADIFTEAQFIVGLDNETPETLEE 359

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             Q A  +  D  +    T    T  ++     +L    E      YN    I     + 
Sbjct: 360 TFQMAWDWQPDLANWAMYTPWPFTPLFQ-----ELRDQVEVFDFSKYNFVTPIMKPATMT 414

Query: 250 AYE-----ISNHSFLGAESLHNLNYWRYGDY 275
             E     + N+             WR   Y
Sbjct: 415 RGELLDGVMKNYRRFYMRKALFHYPWRGTGY 445


>gi|148265002|ref|YP_001231708.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146398502|gb|ABQ27135.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 476

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC YC     F+    R +  +  + +  +  +  +  + G + IS           
Sbjct: 206 CPSKCIYCLWPQTFSGRTMRVRSAENVYQE--VKWI--VDNIPGVKEIS----------- 250

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +        +           + I+   N   + +    +  R+AG+  + +G +S  E
Sbjct: 251 FDDDTFTANREHARAVAEKIKPLGISWTINARANCDYETLRIMREAGLRHVVVGFESGNE 310

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           Q L+ + +    ++AI  +   + +   +    I  LP +T       ++ A    ++ +
Sbjct: 311 QILKNIKKGVTKAQAIEFVRNCKKLGLSVHGAFIMGLPGETRETIRETIEYAKFLDLNSI 370

Query: 203 SLYQLTIEKGTLFYKM 218
            +   +   GT FY +
Sbjct: 371 QVSLASPYPGTEFYDL 386


>gi|59800506|ref|YP_207218.1| hypothetical protein NGO0037 [Neisseria gonorrhoeae FA 1090]
 gi|75356482|sp|Q5FAI1|MIAB_NEIG1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|59717401|gb|AAW88806.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
          Length = 442

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|163941460|ref|YP_001646344.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus
           weihenstephanensis KBAB4]
 gi|229890426|sp|A9VS16|MIAB_BACWK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|163863657|gb|ABY44716.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus
           weihenstephanensis KBAB4]
          Length = 509

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIKEIRHLAA-NGYKEITLLGQNVNAYGKDF-- 274

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              ++I   + D + +   +         ++P   + +      K G  V  I L VQS 
Sbjct: 275 ---EDIQYGLGDLMDELRKIDIARIRFTTSHPRDFDDHLIDVLGKGGNLVEHIHLPVQSG 331

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +       
Sbjct: 332 STDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSLYREVG 391

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL 224
            D    +  +  +GT   KM  +  +
Sbjct: 392 FDTAFTFIYSPREGTPAAKMQDNVPM 417


>gi|134299997|ref|YP_001113493.1| biotin synthase [Desulfotomaculum reducens MI-1]
 gi|134052697|gb|ABO50668.1| iron-only hydrogenase maturation protein HydE [Desulfotomaculum
           reducens MI-1]
          Length = 354

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 65/193 (33%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     +RR     E +   I+  +   ++  QL     +          S 
Sbjct: 65  YCRNDCHYCG----LRRSNKDIERYRIPIEEIVETAKYAAQLGYGTIVLQSGED----SR 116

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              +++A I+  + K    +  + +            +++  +KAG +R  L  ++ +  
Sbjct: 117 YSGEDLAEIIRQVKKVGNFAVTICV------GERSREDYELMKKAGADRYLLKHETADSG 170

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L       E I  +   + +  ++    I  LP QTM     ++    +  V+   
Sbjct: 171 LFTQLRPGTTLKERIKGLTWLKELGYQVGSGNIVGLPGQTMETLADDILLLRALDVEMAG 230

Query: 204 LYQLTIEKGTLFY 216
           +      + T   
Sbjct: 231 IGPFIPHQQTPLR 243


>gi|257418398|ref|ZP_05595392.1| radical SAM superfamily enzyme [Enterococcus faecalis T11]
 gi|257160226|gb|EEU90186.1| radical SAM superfamily enzyme [Enterococcus faecalis T11]
          Length = 322

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S      V     +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDVIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|209547631|ref|YP_002279548.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|229890625|sp|B5ZMY1|MIAB_RHILW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|209533387|gb|ACI53322.1| RNA modification enzyme, MiaB family [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 469

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 183 CDKFCTFC---VVPYTRGSEVSRPVAQIVEEAEKLVE-GGVREITLLGQNVNAWHGAGPR 238

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++      +R     +  + L VQS 
Sbjct: 239 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIDAHRDLRALMPYLHLPVQSG 295

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E ++ I   R + P ++   D I   P +T   +E  L+      
Sbjct: 296 SDRILKAMNRRHTAAEYLSLIARIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVR 355

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 356 YAQAFSFKYSTRPGTP 371


>gi|218767554|ref|YP_002342066.1| hypothetical protein NMA0590 [Neisseria meningitidis Z2491]
 gi|229890575|sp|A1IQ34|MIAB_NEIMA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|121051562|emb|CAM07860.1| hypothetical protein NMA0590 [Neisseria meningitidis Z2491]
          Length = 442

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 332 LSFVFIYSPRPGTPAANLH 350


>gi|157693043|ref|YP_001487505.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
 gi|157681801|gb|ABV62945.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
          Length = 453

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 83/255 (32%), Gaps = 13/255 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 154 CNNFCTFC---IIPWARGLLRSRDPEEVINQAQQLVDAGYKEIVLTGIHTGGYGEDLKDY 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L  + +       + I+     S +     +   ++   V  + + +QS     L
Sbjct: 211 NFAKLLKELDERVNGLKRIRIS-SIEASQITDEVIEVLDQSDKIVRHLHIPLQSGSNTVL 269

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +   +       ++ D+I   P +T  ++         +    L 
Sbjct: 270 KRMRRKYTMEFFAERLTKLKKALPGLAVTSDVIVGFPGETEEEFLETYNFVKDHQFSELH 329

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYE-ISNHSFL 259
           ++  +   GT   +M    D  + +     +      L +   SA+     E I   SF 
Sbjct: 330 VFPYSKRTGTPAARMEDQVDENVKNERVHRLIALSDQLAKEYASAYEGDVLEIIPEESFK 389

Query: 260 GAESLHNLNYWRYGD 274
             E  HNL Y  Y D
Sbjct: 390 EQEGKHNL-YVGYTD 403


>gi|282860156|ref|ZP_06269231.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
 gi|282587045|gb|EFB92275.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
          Length = 451

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G R I       G       +
Sbjct: 169 CNYFCTYC---TIPYARGFSRNPSIASLVKQAE-EAVAEGGREIVLTGVNIGDFGRTTSE 224

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + K   +      ++E  P  ++          K  +    + +QS  ++ L
Sbjct: 225 SFLDLVKALDKVEGIERYRISSLE--PDLIDDELIAYCATSKHFMPHFHIPLQSGSDEVL 282

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+++ +     I+L +   P   +  D++     +    +E       +  V  L 
Sbjct: 283 KLMHRHYDRALFANKINLIKEYMPNAFIGVDVMVGSRGEKPEYFEDCYNFLDALPVTQLH 342

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 343 VFPYSERPGT 352


>gi|148257635|ref|YP_001242220.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Bradyrhizobium sp. BTAi1]
 gi|146409808|gb|ABQ38314.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Bradyrhizobium sp. BTAi1]
          Length = 534

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 20/208 (9%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  I+     +  +  L    
Sbjct: 186 YIYIPMNKRVAIPNMARGCPFTCSFCS------QWKFWRDYRIRDPKKVVDEIETLMREH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++ + + +A   + I ++  +   +   +       +      YRKAG
Sbjct: 240 DVGFFILADEEPTINKKKFVAFCEELIRRDLKILWGINTRVTDILR--DEALLPLYRKAG 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +    ++   AI L R+    +    I  L  +T    E 
Sbjct: 298 LIHVSLGTEAAAQMKLDRFNKETTVAQNKKAIQLLRDAGIVVEAQFIVGLENETRETLEE 357

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
             Q A  +  D  +    T    +  ++
Sbjct: 358 TYQMARDWKPDLANWAMYTPWPFSDLFR 385


>gi|23015405|ref|ZP_00055182.1| COG0621: 2-methylthioadenine synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 425

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG----GGTPSL 83
           C K C +C                  + L E   + Q  G R I+ +        G    
Sbjct: 147 CDKFCTFC---VVPYTRGAEYSRPATAILAEAAKLAQ-GGVREITLLGQNVNGWHGD--- 199

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E   +  ++  +A+   V      T  ++P  ++    + + +    +  + L VQS  
Sbjct: 200 -EGWGLGRLIRALAEVPGVERLRYTT--SHPRDMDDELIRAHAELPQLMPFLHLPVQSGS 256

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H+    +  +   +++ P   +S D I   P ++   +E  +        
Sbjct: 257 DRILAAMNRGHDRDTYLRLVDRLKSVCPDLALSSDFIVGFPGESDADFEASMDLIRQVGF 316

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                ++ +   GT    M +     +  E +A     L +  T  + 
Sbjct: 317 VQTYSFKYSPRPGTPAAAMDQQVPEPVKDERLAQVQALLMEQTTRFNH 364


>gi|257784577|ref|YP_003179794.1| RNA modification enzyme, MiaB family [Atopobium parvulum DSM 20469]
 gi|257473084|gb|ACV51203.1| RNA modification enzyme, MiaB family [Atopobium parvulum DSM 20469]
          Length = 455

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 8/142 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             +NP  +        ++    +  + L VQS   + L+ + R++   E +  +   R  
Sbjct: 243 TSSNPKDLTDETIAAMKETPAVMPHLHLAVQSGSTRVLKKMNRSYTREEYLDVVSRLRAA 302

Query: 168 --FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                +S D+I   P +T   +E  L             +  +   GT   K     +  
Sbjct: 303 IPGLALSTDIIVGFPGETEEDFEETLSLVKEAGYSSAYTFIYSKRPGTPAAK----YEDN 358

Query: 226 LPSENVAVDLYNLTQSITSAHG 247
            P E +      L + +     
Sbjct: 359 TPHEVIQERFDRLAELVAQQAH 380


>gi|255066997|ref|ZP_05318852.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria sicca ATCC
           29256]
 gi|255048822|gb|EET44286.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria sicca ATCC
           29256]
          Length = 496

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 211 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----ME 265

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 266 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 325

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 326 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 385

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 386 LSFVFIYSPRPGTPAANLP 404


>gi|218510260|ref|ZP_03508138.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli Brasil 5]
          Length = 450

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + + +  G R I+ +      + G  P 
Sbjct: 196 CDKFCTFC---VVPYTRGSEVSRPVSQIVEEAEKLVE-AGVREITLLGQNVNAWHGAGPR 251

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  +L  +A+   ++     T  ++P  ++    + +R     +  + L VQS 
Sbjct: 252 G-EAWSLGDLLYRLAEIPGLARLRYTT--SHPRDMDDRLIEAHRDLRALMPYLHLPVQSG 308

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A+E  + I   R + P ++   D I   P +T   +E  L+      
Sbjct: 309 SDRILKAMNRRHTAAEYFSLIERIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVR 368

Query: 199 VDHLSLYQLTIEKGTL 214
                 ++ +   GT 
Sbjct: 369 YAQAFSFKYSTRPGTP 384


>gi|190890095|ref|YP_001976637.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli CIAT 652]
 gi|190695374|gb|ACE89459.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli CIAT 652]
          Length = 509

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 82/241 (34%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L   + +  I      P+     
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRSPELFA------REIARLYREQGVELINLADENPTSSRKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   IA+N  V    +I        +  + +    YRKAGV R  LG+++ +E +L
Sbjct: 257 WLAFLEAMIAENVPV----QIVGSTRADDIVRDADILHLYRKAGVVRWLLGMENTDEATL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++ ++      ++ LSY  D +   
Sbjct: 313 ALIKKGGAKTTDREAIRLLRQHDILSMATWVVGFEEEKLSDLWRGFRQLLSYDPDQIQAL 372

Query: 206 QLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +T  + T F+     +   + D+        V        +     +   E++  +   
Sbjct: 373 YVTPHRWTSFFRIARDRQVIETDIRKWDYKHQVLKMRYLHPLALVACVKLIEVAVQARPK 432

Query: 261 A 261
           A
Sbjct: 433 A 433


>gi|225865753|ref|YP_002751131.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB102]
 gi|225786232|gb|ACO26449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB102]
          Length = 509

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 14/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +Q +R L           G    +  +  
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEDIIQEIRHLVANGYKEITLLGQNVNAYGKDF 274

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D + +   V         ++P   + +  +   K G  V  I L VQS   +
Sbjct: 275 EDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTE 334

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        D 
Sbjct: 335 MLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGFDT 394

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              +  +  +GT   KM  +  + +  +   +   N   +  +      Y
Sbjct: 395 AFTFIYSPREGTPAAKMKDNVPMEV--KKERLQRLNALVNKLAIEKNDRY 442


>gi|194097636|ref|YP_002000671.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998169|ref|ZP_04718093.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae 35/02]
 gi|240079933|ref|ZP_04724476.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae FA19]
 gi|240114885|ref|ZP_04728947.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae PID18]
 gi|240122726|ref|ZP_04735682.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae PID332]
 gi|240124916|ref|ZP_04737802.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae SK-92-679]
 gi|240127427|ref|ZP_04740088.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae SK-93-1035]
 gi|254492946|ref|ZP_05106117.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260441300|ref|ZP_05795116.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
           gonorrhoeae DGI2]
 gi|268594020|ref|ZP_06128187.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268596073|ref|ZP_06130240.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268600543|ref|ZP_06134710.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268681325|ref|ZP_06148187.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268683496|ref|ZP_06150358.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268685802|ref|ZP_06152664.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291044655|ref|ZP_06570364.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293397764|ref|ZP_06641970.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria gonorrhoeae
           F62]
 gi|229890573|sp|B4RNW8|MIAB_NEIG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|193932926|gb|ACF28750.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae NCCP11945]
 gi|226511986|gb|EEH61331.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268547409|gb|EEZ42827.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268549861|gb|EEZ44880.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268584674|gb|EEZ49350.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268621609|gb|EEZ54009.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268623780|gb|EEZ56180.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268626086|gb|EEZ58486.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291011549|gb|EFE03545.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611710|gb|EFF40779.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria gonorrhoeae
           F62]
 gi|317163459|gb|ADV07000.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 442

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|183220661|ref|YP_001838657.1| hypothetical protein LEPBI_I1270 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910763|ref|YP_001962318.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167775439|gb|ABZ93740.1| Fe-S oxidoreductase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779083|gb|ABZ97381.1| Hypothetical protein LEPBI_I1270 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 643

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 68/191 (35%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC F       K  Q          +  +  L G  +   +F     P+     
Sbjct: 207 CKSQCTYC-FY-----PKSSQSLRTLDIKETIHLISNLKGKGAKELVFL---DPTFNHRP 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                LD IA+       + +  E     V        RKAG NRI LG+QS+ E++L+ 
Sbjct: 258 GFESFLDAIAE-VNADGQMTMFAELRSEGVTPKLATKLRKAGFNRIELGLQSVNEETLKR 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL-SLYQ 206
           + R  +  +      +       +  DLI  LP  T    E  +   L + +      + 
Sbjct: 317 VKRYGSPHKVAEVAKMLAGEGIDLLLDLIIGLPGDTPDDVERGIHFFLEHGLGEWVQAFP 376

Query: 207 LTIEKGTLFYK 217
           L++  GT   K
Sbjct: 377 LSVLPGTSMRK 387


>gi|326404224|ref|YP_004284306.1| hypothetical protein ACMV_20770 [Acidiphilium multivorum AIU301]
 gi|325051086|dbj|BAJ81424.1| hypothetical protein ACMV_20770 [Acidiphilium multivorum AIU301]
          Length = 474

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 12/229 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFGGGTPSLIEP 86
           C  +C +C +   V  ++       +S    +  ++Q+      +  +FF   T +    
Sbjct: 207 CKSRCTFCLWPQTVGGHRYRT----RSVEHVIAEVKQIQRDFPQMRELFFDDDTFT---- 258

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N+        +   +        +AN   V  +  +  R  G+  + +G +S  +Q L 
Sbjct: 259 DNLPRAEAIARELGKLGVTWSCNAKAN---VPRDTLKVLRDNGLRLLLVGYESGNQQILH 315

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +      A        ++  ++    I  LP +T       +  A       + +  
Sbjct: 316 NIKKGMRIEVAKKFTKDCHDLGIKIHGTFILGLPGETQDTIRETIDFAKEINPHTIQVSL 375

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                GT  Y    +   +  +    +D + +  +      L   EI +
Sbjct: 376 AAPYPGTFLYNQAVENGWLDAAHAELIDDHGIQIAPLHYPHLTHTEIFD 424


>gi|319409818|emb|CBY90126.1| putative MiaB-like tRNA modification enzyme [Neisseria meningitidis
           WUE 2594]
 gi|325129521|gb|EGC52348.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           OX99.30304]
 gi|325135644|gb|EGC58261.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M0579]
 gi|325141561|gb|EGC64027.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           961-5945]
 gi|325197636|gb|ADY93092.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           G2136]
 gi|325206777|gb|ADZ02230.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
           M04-240196]
          Length = 442

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    +H
Sbjct: 332 LSFVFIYSPRPGTPAANLH 350


>gi|300309644|ref|YP_003773736.1| Fe-S oxidoreductase [Herbaspirillum seropedicae SmR1]
 gi|300072429|gb|ADJ61828.1| Fe-S oxidoreductase protein [Herbaspirillum seropedicae SmR1]
          Length = 508

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 14/255 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN- 88
           C + CDF       +V   + + +     M++       R +  +   G     I  +  
Sbjct: 232 CSFGCDFCMINIVNRVDSSDGVSAAQSRGMRFWSPAWVARQMRKLADLGVRTLRISDEMF 291

Query: 89  -IALILDGIAKNWTVSSNVEITIEA--NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +            +  +    +       +V  +  + +++AGVN ++LGV++  +   
Sbjct: 292 FLNRKYYTPILQQAIDEDFGFNMWTYSRVDTVRRDALELFKRAGVNWLALGVEAGNQMVR 351

Query: 146 RFLGRNHNASEA--IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + +  +  E        +  +    +  + I+  P  T    +  L  AL    +  +
Sbjct: 352 QEVSKG-SFKEVNIRDVCKVINDADINIISNYIFGFPDDTRETMQETLDLALELNTEMAN 410

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +Y      G+  Y   K     LP         +          + A E+         +
Sbjct: 411 MYPCQALPGSPMYYTAKKNGWALPDSYEGYAFLSYESQPLPTKYMSAAEVLKFRDEAWRT 470

Query: 264 LHNLNYWRYGDYIGI 278
                Y+   DY+ +
Sbjct: 471 -----YFTNPDYLSL 480


>gi|229092810|ref|ZP_04223948.1| hypothetical protein bcere0021_35610 [Bacillus cereus Rock3-42]
 gi|228690608|gb|EEL44389.1| hypothetical protein bcere0021_35610 [Bacillus cereus Rock3-42]
          Length = 457

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           D    +  +  +GT   KM  +  +    +   +   N   +  +      Y
Sbjct: 393 DTAFTFIYSPREGTPAAKMKDNVPME--VKKERLQRLNALVNKLAIEKNDRY 442


>gi|219854681|ref|YP_002471803.1| hypothetical protein CKR_1338 [Clostridium kluyveri NBRC 12016]
 gi|219568405|dbj|BAH06389.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 451

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 73/231 (31%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     +    +  +         R +  +       +     
Sbjct: 162 CDNYCTYC----IIPKIRGK---YRSRSIENILQECNELSLRGVKEVILIAQDTTRYGID 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ--GYRKAGVNRISLGVQSL 140
           L   + +  ++  I+K   +       +   P  +  +            N I + +Q +
Sbjct: 215 LYNKKMLPELMRSISKIEGIEWIR--LLYCYPEEITEDIIDEIALNDKVCNYIDIPLQHI 272

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR     + +  I+  R     +S    +I   P ++   ++       +  
Sbjct: 273 SDNILKLMGRRGRKKDILRNINELRKKINDISIRTTIIVGFPGESEEDFKELKNFIENIK 332

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            D+L +++ + E+GT  YKM       L +      +      I S     
Sbjct: 333 FDNLGVFKYSREEGTRAYKMKDQVSEELKTAREGELMMLQKHIIYSMQKYK 383


>gi|188582893|ref|YP_001926338.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium populi BJ001]
 gi|179346391|gb|ACB81803.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium populi BJ001]
          Length = 474

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   +   + E+++  +               T +L   +
Sbjct: 206 CKSRCTFCLWPQTVG-GHTYRTRSVAHVIEEIKYCMKEFPQTKEFFFDDDTFTDNLPRAE 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  R+ G+  + +G +S  ++ L  
Sbjct: 265 EIARELGKLGVTWSCNAKA---------NVPRETLKVLRENGLRLLLVGYESGNQKILNN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +    I  LP +T    +  +  A       + +   
Sbjct: 316 IKKGMRVEVAEKFTKDCHDLGIAIHGTFIVGLPGETKETIQETIAFAKRINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  YK 
Sbjct: 376 APYPGTFLYKQ 386


>gi|308173664|ref|YP_003920369.1| tRNA modification protein [Bacillus amyloliquefaciens DSM 7]
 gi|307606528|emb|CBI42899.1| putative conserved AdoMet radical enzyme for tRNA modification
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553404|gb|AEB23896.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           amyloliquefaciens TA208]
 gi|328911804|gb|AEB63400.1| putative AdoMet radical enzyme for tRNA modification [Bacillus
           amyloliquefaciens LL3]
          Length = 509

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC     +  Y  G+E   +     +Q +R+L           G    +  +  
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 87  QNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++I   + D + +   +         ++P   + +  +   K G  ++ I L VQS    
Sbjct: 275 EDITYGLGDLMDELRKIDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSA 334

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++    +  +   +   P  S   D+I   P +T  Q+E  L        D 
Sbjct: 335 MLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDS 394

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +  +  +GT   KM  +  + +  E +     +L + I SA  +  YE
Sbjct: 395 AYTFIYSPREGTPAAKMKDNVPMRVKKERLQRLN-DLVKEI-SAKKMKEYE 443


>gi|254516558|ref|ZP_05128617.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [gamma proteobacterium
           NOR5-3]
 gi|219674981|gb|EED31348.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [gamma proteobacterium
           NOR5-3]
          Length = 446

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 67/201 (33%), Gaps = 12/201 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  +    G R +     ++    G     + 
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVIAEVAGLAAR-GVREVNLLGQNVNAYRGDNHEGDV 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A +L  +A    +      T  ++P        Q Y +    V+ + L VQ+  ++ 
Sbjct: 216 VDFAELLHFVAAIPGIDRIRYTT--SHPVEFSEALIQAYAEIPELVDHLHLPVQAGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E  + I   R I P +S   D I   P +T   +   ++       D  
Sbjct: 274 LAAMKRGHTVLEYKSKIRKLRTIRPNISMSSDFIIGFPGETEADFAATMKLIDDIGFDAS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
             +  +   GT    +  D D
Sbjct: 334 FSFIYSARPGTPAADLKDDTD 354


>gi|218282363|ref|ZP_03488645.1| hypothetical protein EUBIFOR_01227 [Eubacterium biforme DSM 3989]
 gi|218216649|gb|EEC90187.1| hypothetical protein EUBIFOR_01227 [Eubacterium biforme DSM 3989]
          Length = 432

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC        +  G+E  +      +Q  + L        +  G  T    + +
Sbjct: 159 CNQFCSYC-----AIPFARGRERSLNH-EQVIQIAKDLCDKGHTEIVLTGIHTGRYFDGE 212

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A ++  + +N               + V        ++     + + + VQS   ++
Sbjct: 213 YDLAKLMKALLENTP-DYVYYRISSIEITEVSDELIGLMQENSRMCHHLHIPVQSACNET 271

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   +    I   R+  P +S   D+I    +++  ++E   +      +   
Sbjct: 272 LKRMNRPYTIEQFKEKIEYIRSCIPDISISTDVIAGFVQESDEEFETTYKNLAELELSFF 331

Query: 203 SLYQLTIEKGT 213
            ++  +   GT
Sbjct: 332 HVFPYSKRNGT 342


>gi|158337776|ref|YP_001518952.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acaryochloris
           marina MBIC11017]
 gi|229890405|sp|B0C0E2|MIAB_ACAM1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|158308017|gb|ABW29634.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acaryochloris marina
           MBIC11017]
          Length = 454

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          V Q    ++   EM  + +  G + ++ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPEAIRAEMVQLGEQ-GFKEVTLLGQNIDAYGRDLPG 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E ++   + D +     V     I     +P        Q   +         +  Q
Sbjct: 213 TTSEGRHQHTLTDLLYFVHDVPGIERIRFATSHPRYFTERLIQACYELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +   +    I    A      +S D I   P +T  Q+   +Q    
Sbjct: 273 SGDNDVLKAMSRGYTHEKYRRIIDNIRAIMPDASISADAIVGFPGETEEQFMNTMQLVED 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IEFDLLNTAAYSPRPGTP 350


>gi|90022940|ref|YP_528767.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Saccharophagus
           degradans 2-40]
 gi|122995883|sp|Q21FH4|MIAB_SACD2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|89952540|gb|ABD82555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Saccharophagus degradans
           2-40]
          Length = 454

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 9/219 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +      +           Q  G R ++ +             
Sbjct: 165 CSKYCTFC--VVPYTRGEEVSRPAVDVLREVTHLASQ--GVREVNLLGQNVNAYRDDSSG 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +  + + IA    +     I     +P     +  Q Y +    V+ + L VQS  ++ 
Sbjct: 221 EVIDLAELIAAVADIDGIDRIRFTTSHPMEFTESLIQAYAEIPELVSHLHLPVQSGSDRI 280

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   E  + +   R + P +SF  D I   P +T   +   ++       D+ 
Sbjct: 281 LSAMKRGHTCLEYKSKLRKIRALRPDISFSSDFIIGFPGETEADFAATMKLIEDIGFDNS 340

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  +   GT    +  D    +  + + +    + Q 
Sbjct: 341 FSFIYSPRPGTPAADLPDDTPEQVKKDRLKILQTRIIQQ 379


>gi|271499717|ref|YP_003332742.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dickeya dadantii Ech586]
 gi|270343272|gb|ACZ76037.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dickeya dadantii Ech586]
          Length = 476

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 65/201 (32%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F              +   L E+  +    G R +     ++    G    
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGAT-- 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               +I    + +     +     I  I ++P     +    Y      V+ + L VQS 
Sbjct: 213 -HDDDICSFAELLRLVAAIDGIDRIRFITSHPIEFTDDIISVYEDTPELVSFLHLPVQSG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   R   P  ++S D I   P +T   +E  +Q      
Sbjct: 272 SDRILTMMKRRHTALEYKAIIRKLRKARPAIQISSDFIVGFPGETQEDFEQTMQLIADVD 331

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    M 
Sbjct: 332 FDMSFSFIYSPRPGTPAADMV 352


>gi|238019482|ref|ZP_04599908.1| hypothetical protein VEIDISOL_01351 [Veillonella dispar ATCC 17748]
 gi|237864181|gb|EEP65471.1| hypothetical protein VEIDISOL_01351 [Veillonella dispar ATCC 17748]
          Length = 446

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 16/197 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +NS           +I   + ++    +  G + I  I            Q
Sbjct: 170 CPHRCDFC-YNSSGTHQ------YINRNIEDVLEDIKKLGTKHIMFIDDNFIGNISWTKQ 222

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I     K   ++ N  +T++              ++ G   + +G +S+  QSL  
Sbjct: 223 FLERI-----KPLKLNWNAAVTMKIGQH---PELMDLMKETGCQSLFIGFESISSQSLSS 274

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  N   E    I+        ++   ++ L   T   ++  L   +S  +D ++ + 
Sbjct: 275 VHKMQNNREEFERLINELHKRGIMVNASFVFGLDGDTPETFKNTLNWIISQKIDTITSHI 334

Query: 207 LTIEKGTLFYKMHKDGD 223
           +T   GT FYK  ++ +
Sbjct: 335 VTPYPGTEFYKRMEEQN 351


>gi|325262830|ref|ZP_08129566.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
 gi|324031924|gb|EGB93203.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
          Length = 440

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 79/241 (32%), Gaps = 21/241 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +   +    +  ++    ++ +R+L        +  G    S  I+ 
Sbjct: 163 CNQFCSYC----IIPFARGRVRSRAKA--DVLEEVRRLAENGYQEVVLTGIHLSSYGIDL 216

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +    +L  I     V     I +    P  +     Q             L +QS  + 
Sbjct: 217 EETESLLSLIRAVHEVRGIRRIRLGSLEPRIITEEFVQELASLEKICPHFHLSLQSGCDT 276

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R +++ E      L R  F    ++ D+I   P +T  ++E           D 
Sbjct: 277 TLKRMNRRYSSEEYFEKCLLLRKYFDNPALTTDVIVGFPGETEEEFEQSRAFV-----DK 331

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           +  Y+  I K +               E V     +   ++       AYE S   F+G 
Sbjct: 332 VDFYETHIFKYSKRQGTKAAVMENQVPEQVKAQRSDNLLALNEK-KRRAYEKS---FIGK 387

Query: 262 E 262
           E
Sbjct: 388 E 388


>gi|242243020|ref|ZP_04797465.1| conserved hypothetical radical SAM protein [Staphylococcus
           epidermidis W23144]
 gi|242233478|gb|EES35790.1| conserved hypothetical radical SAM protein [Staphylococcus
           epidermidis W23144]
          Length = 317

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 69/214 (32%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   +   I+    +++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRAEPIEVQFKKIKERMHEKWSEGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K       V ++I   P  +  +  +   +        + LG
Sbjct: 99  TNTHAPVEVLKEKYEPVLKE---DGVVGLSIATRPDCLPDDVVEYLAELNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQSTSDLINRAHDMQTYYDGVTKLRKHDINVCTHIINGLPGENYDMMMETAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             V  + ++ L + KGT   K ++ G L   S+ 
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYEKGMLEFMSQQ 249


>gi|157825701|ref|YP_001493421.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford]
 gi|157799659|gb|ABV74913.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford]
          Length = 416

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 83/237 (35%), Gaps = 27/237 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   +   +  +    +         + F G         
Sbjct: 143 CDHFCTFC-----IIPYGRGKSRSVP--IGAIAEQVKYLVLNGFKEVVFTGVDVTAYGSD 195

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + 
Sbjct: 196 LPGSPTF--AQMIKRVLNLVPELKRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHIS 250

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ +E  L+ + R H  ++ I      R I P +SF  D+I   P +T   ++   +  
Sbjct: 251 LQAGDEMILKRMKRRHTRAKVIEFCRKLRAIRPEVSFGADIIAGFPTETPEMFDNTRKLI 310

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              A+ +L ++  +  +GT   +M +    +   +  A  L    Q+  S       
Sbjct: 311 SEAALQYLHVFPYSEREGTPAARMPQVPKTIR--KERAEILRQEGQNQLSEFFKKHI 365


>gi|319938279|ref|ZP_08012676.1| Fe-S oxidoreductase [Coprobacillus sp. 29_1]
 gi|319806572|gb|EFW03230.1| Fe-S oxidoreductase [Coprobacillus sp. 29_1]
          Length = 330

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 16/224 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C              N   S   + + +  +   +        +F   + +    + 
Sbjct: 51  CIFCS----DSGSGDFAGNVHDSLQKQFENVSAMMRRKWPDCQFIAYFQANSNTYAPVKQ 106

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +    +   +   V   V + I   P  +  +      +        I LG+Q++  Q+ 
Sbjct: 107 LKATFEPFLQQKDV---VGLAIATRPDCLNEDVCDYLYELSQKCDLYIELGLQTIHNQTG 163

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +F+ R H+    +  +   RN    +   +I  LP +T        +      +  + ++
Sbjct: 164 QFIHRGHDYQTFLDGLSRLRNRKIDVCVHIINGLPYETRKMMLETAKAVGQLDIQGIKIH 223

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L I K T+ + +++     L S +  +    L     +    H
Sbjct: 224 NLFILKNTILHHIYESKPFPLLSRDEYIS---LVVEQLAYIPEH 264


>gi|282899649|ref|ZP_06307613.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic
           oxidativecyclase [Cylindrospermopsis raciborskii CS-505]
 gi|281195528|gb|EFA70461.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic
           oxidativecyclase [Cylindrospermopsis raciborskii CS-505]
          Length = 526

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 106/313 (33%), Gaps = 31/313 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +  R+Y+       + F+ +++    L     +         P++ +P+
Sbjct: 200 CPFTCRFCSQWAFWRKYRSSSP---KKFVDQIEL---LVKKYQVGFFILADEEPTINKPK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + L  + IA+N  V   +   +       +  +   YR+AG+  +SLG ++  +  L  
Sbjct: 254 FLDLCHELIARNLGVHWGINTRVTDILR--DEADLPLYRQAGLVHVSLGTEAAAQLKLNL 311

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     +   AI L +          I  L  +T    E   + AL +  D ++    
Sbjct: 312 FRKETTIEQNKRAIQLLQQNGMVAEAQFIMGLENETPETIEETYKMALDWKADMVNWNMF 371

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI-----SNHSFLGAE 262
           T    +  ++     DL    E      YN    I     +   ++      N++     
Sbjct: 372 TPWPFSELFQ-----DLGDRVEVRDYSQYNFVTPIMKPDAMEREDVLKGVLKNYARFYLR 426

Query: 263 SLHNLNYWRYGD-----YIGIGP-GAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVV 316
                 YW   D     Y+ +G  GA  +  +      +   K    +  +  +      
Sbjct: 427 K--TFEYWFVKDSFKRKYL-LGCLGAFVKTTLNKRFYNLKRVK----YKGLSTEIELGFD 479

Query: 317 EKEFLSSEQQADE 329
           + + L+ EQ A  
Sbjct: 480 QSKILTREQIAQR 492


>gi|315166997|gb|EFU11014.1| radical SAM protein family [Enterococcus faecalis TX1341]
          Length = 322

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S      V     +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDVIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|258541492|ref|YP_003186925.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632570|dbj|BAH98545.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635627|dbj|BAI01596.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638682|dbj|BAI04644.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641736|dbj|BAI07691.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256644791|dbj|BAI10739.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256647846|dbj|BAI13787.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256650899|dbj|BAI16833.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653890|dbj|BAI19817.1| iron-sulfur (Fe-S) oxidoreductase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 476

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 73/228 (32%), Gaps = 10/228 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  ++  +    Q    E++  +Q               T  L   +
Sbjct: 208 CKSRCTFCLWPQTVGGHR-YRTRSPQHVAAEIRLAKQYFPQVKEFFFDDDTFTDDLPRAE 266

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  R  G+  + +G +S  +Q L  
Sbjct: 267 AIARELGKLGVTWSCNAKA---------NVPRETLKVLRDNGLRLLLVGYESGNQQILHN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T    +  ++ A       L +   
Sbjct: 318 IKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFAQEINPHTLQVSLA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               GT  +K   +   +  +    +D   +  +      L   EI N
Sbjct: 378 APYPGTALHKQATENGWLDETNAELLDDNGVQIAPLHYPHLSHTEIFN 425


>gi|229890685|sp|B2VBL4|MIAB_ERWT9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 74/236 (31%), Gaps = 26/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C +C       R +              Q   Q  G R ++ +           F 
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEVAQLAAQ--GVREVNLLGQNVNAYRGETFD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG   +     +  ++  I        +      ++P     +    YR     V+ + L
Sbjct: 213 GG---ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFNDDIIDVYRDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + R H A E  A I   LA     ++S D I   P +T   +E  ++ 
Sbjct: 265 PVQSGADRILTLMKRAHTALEYKAIIRKLLAARPNIQISSDFIIGFPGETQADFEQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                 D    +  +   GT    +  D       + + +    + Q  T+     
Sbjct: 325 IGEINFDISYSFIYSARPGTPAADLPDDVSEDEKKQRLYILQDRINQQTTAWSRRK 380


>gi|189218731|ref|YP_001939372.1| 2-methylthioadenine synthetase [Methylacidiphilum infernorum V4]
 gi|229890614|sp|B3E0M0|MIAB_METI4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|189185589|gb|ACD82774.1| 2-methylthioadenine synthetase [Methylacidiphilum infernorum V4]
          Length = 467

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 103/355 (29%), Gaps = 64/355 (18%)

Query: 8   ENNMTGQGSNSLG------VYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           E       +  L        YV     C   C +C            +   I     E++
Sbjct: 132 EEAAHNAINKHLSTKAQPIAYVSIMQGCSMHCSFC---IVPTTRGEERSRPIDEIFEEVK 188

Query: 61  WMRQLTGPRSISSIFF------------GGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
            + + +    +                  G +P          +L+ ++    +      
Sbjct: 189 RLAETSVKEIVLLGQIVNRYGAKEFPWVKGKSP-------FVQLLEKLSTIEEIKRIRF- 240

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
               +P   + +     R        + L VQS  ++ L+ + R ++ S+ ++ +   R 
Sbjct: 241 -TSPHPLGFKEDLIAALRDIPQLCEHVHLPVQSGSDKILKAMRRGYSRSKFLSLVDKLRK 299

Query: 167 IFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL---FYKMHKD 221
             P++  S D+I   P +T   ++           D+  +++ +  +GT          +
Sbjct: 300 AIPQLALSTDIIVGYPGETEEDFQQTCSLLNEVRFDNAFIFRYSAREGTTAASLGDQLSE 359

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPG 281
                 +  +      +T            EI     +  ES  N               
Sbjct: 360 EVKFERNYRLLEIQNKITMEKAQKWVGQVVEI----LVEGESKKN--------------- 400

Query: 282 AHSRVKVGSHRVAISIEKHPESW------LKMVRKNGHAVVEKEFLSSEQQADEF 330
             S+ +  +    + I    E W      +++V   GH       +S   +A +F
Sbjct: 401 -ASKFQGRTRTNHLVIIPKNERWRGEFLPVRIVETTGHTFYGTPLISGIDEALQF 454


>gi|327312819|ref|YP_004328256.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola
           F0289]
 gi|326945460|gb|AEA21345.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola
           F0289]
          Length = 442

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   ++S L E+       G + ++    ++   G  P+ 
Sbjct: 155 CNNFCHYC---IVPFTRGRERSRDVESILKEV-HDLHDKGFKEVTLLGQNVNSYGLLPNG 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + + K      N+ +     NP  +  +  +         N I    QS 
Sbjct: 211 RRPENGTSFAELLRKVAQSVPNMRVRFTTSNPEDMTEDIVEAIAAEPNLCNHIHFPAQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +   + +A +   R + P      D+      +T   ++  L       
Sbjct: 271 SNNVLKLMNRKYTREDYLAKVAAIRRLVPDCGLTTDIFIGYHNETEEDFQQTLSLMREVG 330

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   +
Sbjct: 331 FDSAFMFKYSERPGTYAAR 349


>gi|251778473|ref|ZP_04821393.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082788|gb|EES48678.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 288

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 24/257 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    + + K+     ++    E+ + R +     +  IF   G   +I  
Sbjct: 24  CSHNKCSFCN----MYKSKIFTIKSLEEIKKEIDYFRTIYKY--VEKIFLADGDALIIPI 77

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL              +T+  +P S+    +   +  +K G+  I +G++S +++
Sbjct: 78  VDLKSILK--YIKNVFPECTRVTMYGSPKSILLKSIEELEELKKLGLYMIYMGIESGDDE 135

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +  ++ E I A    +     +S  +I  +    +++       +       D+
Sbjct: 136 VLLDINKGVSSKELIKATRKVKKSKITLSVTVIAGIGGNEKSINHAINTGKIISEIEPDY 195

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           L +  L +EK T  Y    + +  + +    +D   L              +SNH  +  
Sbjct: 196 LGVLTLMLEKRTELYNKMLNKEFNVLNNKDILDETKLLIE--------NISVSNH--VIF 245

Query: 262 ESLHNLNYWRYGDYIGI 278
              H  NY      + I
Sbjct: 246 RCNHASNYISLKGTLPI 262


>gi|187932373|ref|YP_001884337.1| radical SAM protein [Clostridium botulinum B str. Eklund 17B]
 gi|187720526|gb|ACD21747.1| radical SAM protein, family [Clostridium botulinum B str. Eklund
           17B]
          Length = 312

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 62/179 (34%), Gaps = 6/179 (3%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAGVN 131
           +F   T +      +    +       V   V ++I   P  +E +     +   K    
Sbjct: 90  YFQAYTNTYAPVDELRQKYEEAINQEGV---VALSIATRPDCLEDDVLDLIEELSKKLYV 146

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + LG+Q++ +   + + R ++      A+   +     +    I  LP ++       +
Sbjct: 147 WVELGLQTINDDVAKKINRGYDLKVFDNAMTRLKERNIDVVVHSILGLPGESQDDMLKTI 206

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                     + L+ L + K T   +++++G+L   S+   + L     S+     +  
Sbjct: 207 DYIAHSGAQGIKLHLLHLMKDTKMVELYENGELQFLSQEDYIKLICRAVSMLPKEMVVH 265


>gi|238786071|ref|ZP_04630029.1| hypothetical protein yberc0001_25290 [Yersinia bercovieri ATCC
           43970]
 gi|238713010|gb|EEQ05064.1| hypothetical protein yberc0001_25290 [Yersinia bercovieri ATCC
           43970]
          Length = 486

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 169 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 226

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 227 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 284

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R      ++S D I   P +T   +E  ++       D 
Sbjct: 285 ILTMMKRAHTALEYKAIIRKLRQARPGIQISSDFIIGFPGETQQDFEQTMKLVADIRFDT 344

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    +TQ    
Sbjct: 345 SYSFIYSSRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 387


>gi|313112785|ref|ZP_07798432.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624855|gb|EFQ08163.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 485

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 72/191 (37%), Gaps = 6/191 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +    ++ + E++++        +  I F   T ++   Q
Sbjct: 218 CPAQCNFCVYP-QTLHGHRYRLRSPENVIGEIEYIVNNFPD--VKEIVFEDDTFTI-NKQ 273

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            ++ I + + +   ++  +     A   +++       +KAG + I  G++S+ +Q L+ 
Sbjct: 274 RVSEICNMMIQ-KGINKKIRWLCNARV-NLDYETMCLMKKAGCHLIIPGIESVNQQILKN 331

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     +  A +  AR     +    +     +T    +  L  A+ +  D    + L
Sbjct: 332 IHKGTTVEQIEAYVANARKAGLMIHACYMVGNQGETHETMKETLAAAMRFKTDTAQFFPL 391

Query: 208 TIEKGTLFYKM 218
               GT  Y  
Sbjct: 392 IPYPGTGAYNW 402


>gi|289665632|ref|ZP_06487213.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 484

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 71/223 (31%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K C +C       R +     F    +   Q  
Sbjct: 166 IEKFDRLPEPRADGP-SAFVSIMEGCSKYCSFC--VVPYTRGEEVSRPFEDVLVEVAQLA 222

Query: 63  RQLTGPRSISSI------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            Q  G R I+ +      + GG      +    A +   I     +     I     +P 
Sbjct: 223 AQ--GVREINLLGQNVNAYRGGYGADAGDAAQYADLGLLIRTIAQIDGIGRIRFTTSHPL 280

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
               +    YR      N + L VQ+  ++ L  + R + A E  + I   R + P +S 
Sbjct: 281 EFSDSLVDAYRDVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISI 340

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             D I   P +T   +E  ++       D    +  +   GT 
Sbjct: 341 SSDFIVGFPGETEADFEKTMKLIEDVGFDQSFSFVYSRRPGTP 383


>gi|307730932|ref|YP_003908156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1003]
 gi|307585467|gb|ADN58865.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1003]
          Length = 461

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  +L
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAFRGALTL 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A+   +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSSEIADFATLIEYVAEIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    + 
Sbjct: 331 KYDTSFSFIYSPRPGTPAANLP 352


>gi|302875143|ref|YP_003843776.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690225|ref|ZP_07632671.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302578000|gb|ADL52012.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 564

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 11/183 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   + VR +   QE  I + + E++++++    R+   +       SL+ P 
Sbjct: 274 CPNKCSFC---TVVRNFGEYQERDIDTTINEIKFLQEKYKKRAFFMLD------SLMNPY 324

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              L    I ++ ++  +  + I      +       +RK G+ R+ +GV+S  +  L  
Sbjct: 325 ITNLSNGIIQEDLSIYIDGYLRISEEVCDITKTML--WRKGGIYRVRIGVESGSQHVLDL 382

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+        + +   +   P +T   +   L+   S   D       
Sbjct: 383 MSKGISVDQTRNALASLSYAGIKTTTYWVIGHPGETEEDFNQTLKLLESCKDDIWQAECH 442

Query: 208 TIE 210
             E
Sbjct: 443 IFE 445


>gi|308233445|ref|ZP_07664182.1| histone acetyltransferase [Atopobium vaginae DSM 15829]
          Length = 680

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 3/129 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P ++ V +    R  G  ++ +G+Q L E+  +   R  +  +   A  L R
Sbjct: 345 VGLVIETRPDTISVEHLYLMRALGCTKVQMGIQVLNEEIRQRNLRKGSLDDIKQAFELLR 404

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++    +  L   T    + + +  +    Y  D + LY   +         ++ G
Sbjct: 405 LFGFKIHVHAMVNLLGSTPDIDKKDFKMLVHDSLYLPDEVKLYPCVLVDSARLKACYERG 464

Query: 223 DLVLPSENV 231
                +E  
Sbjct: 465 LWQAYTEEE 473


>gi|254479169|ref|ZP_05092518.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214034897|gb|EEB75622.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 362

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  I+     ++          + +I    G    
Sbjct: 68  YCHNTCFYCGLRGPNKAIKRYRMEPEEIIECAKRGVEM--------ELKTIVLQSG---- 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              ++    +  +         +++ +  +   +    +   +KAG +R  L +++   +
Sbjct: 116 ---EDRYYKITTLCNIVEKIKEMDVAVTLSIGELSKKEYAELKKAGADRYLLRIETTNRE 172

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 173 LYRKLHPGMSYENRLRCLMDLRELGYEVGTGSLIGLPGQTLEMLADDLLFFKKINADMLG 232

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   K
Sbjct: 233 IGPFIPCENTPLEK 246


>gi|254471140|ref|ZP_05084543.1| MiaB-like tRNA modifying enzyme [Pseudovibrio sp. JE062]
 gi|211960282|gb|EEA95479.1| MiaB-like tRNA modifying enzyme [Pseudovibrio sp. JE062]
          Length = 422

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 72/202 (35%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +   +  +  +++L        +  G    S    +
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPMGV-VIDQIKRLVDNGYGEIVLTGVDITSYGADL 199

Query: 85  EPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +    +    AK   +  +++       +    +    +        ++ + L +Q+ 
Sbjct: 200 PGE--PKLGTLCAKILKLIPDLKRLRLSSIDSIEADDELMEVIAHDHRLMSHLHLSLQAG 257

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           +   L+ + R H+  + I      R + P + F  D+I   P +T   +E  L+      
Sbjct: 258 DNMILKRMKRRHSREDTIRFCEDVRKMRPDVVFGADIIAGFPTETDEMFENTLRIVDECG 317

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + HL ++  +   GT   +M +
Sbjct: 318 LTHLHVFPFSPRPGTPAARMPQ 339


>gi|218440498|ref|YP_002378827.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 7424]
 gi|218173226|gb|ACK71959.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 7424]
          Length = 478

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 81/251 (32%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  ++   ++  ++   EM+  + L G   +    F   T ++    
Sbjct: 207 CPAKCSFCLWPQTIGGHQYRAKSP-EAVAREMEEAKSLFGD-KVREYMFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    +        +         AN   ++ +  +  +  G+  + +G +S  +Q L  
Sbjct: 261 DKQRAIAISEHLKRLKLTWSCNARAN---LDYDTLKQLKNNGLRLLLVGFESGNQQILDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +     +  ++    I  LP +T    +  ++ A       + +   
Sbjct: 318 IRKGIKLEVAKKFMENCHKLGIKVHGTFILGLPDETQETIDETIRFACEINPHTIQVSIA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
               GT  Y+     +       VA     L+            E       G E L+  
Sbjct: 378 APYPGTELYQQALINNWFTDKNLVANSGIQLSPLEYPNLSSAQIE------AGIERLYRS 431

Query: 268 NYWRYGDYIGI 278
            Y+R    I I
Sbjct: 432 FYFRPRAIIPI 442


>gi|114567094|ref|YP_754248.1| MiaB-like tRNA modifying enzyme [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338029|gb|ABI68877.1| MiaB-like tRNA modifying enzyme [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 456

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   F     R K+ ++        E+Q +  L     + +    G   + +E
Sbjct: 156 CQSYCSYCIVPFARGPSRSKLPED-----VAAELQQLVDLGYHEIVLTGIHTGLYGNDLE 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEE 142
             N++ +L  +      +  + ++    P  ++    +     G        + +QS   
Sbjct: 211 DWNLSRLLRLLFARVEGNYRIRLS-SLEPVEIDEELLE-MAAGGERLCRHFHIPLQSGSS 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR + R ++       +           ++ D++   P +    ++  L       V 
Sbjct: 269 RILRAMNRRYDREFYYKLVQHIVQRVKGAAVTADVMVGFPGEEKKDYQDTLALLQDLPVL 328

Query: 201 HLSLYQLTIEKGTLFYKM 218
            L +++ +   GT   KM
Sbjct: 329 DLHVFKYSKRPGTAAAKM 346


>gi|325981206|ref|YP_004293608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Nitrosomonas sp. AL212]
 gi|325530725|gb|ADZ25446.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Nitrosomonas sp. AL212]
          Length = 442

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 70/199 (35%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI------ 84
           C  YC F              +   LTE+  +    G + I+ +  G    + +      
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVLTEIAVLAAQ-GIKEITLL--GQNVNAYLGMMNDG 213

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + AL+L+ +     +      T  ++P        Q Y +    VN + L VQS  +
Sbjct: 214 EIADFALLLEYLHDIPGIERIRYTT--SHPKEFTTRLIQAYNQLPKLVNHLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R ++  E  + I   R + P +S   D I   P +T   ++  L        D
Sbjct: 272 RVLAAMKRGYSVLEYKSIIRKVRAVRPDISLSSDFIVGFPGETEVDFQATLNLVEEMNFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
               +  +   GT    + 
Sbjct: 332 DSYSFVYSPRPGTPAADLP 350


>gi|295113990|emb|CBL32627.1| radical SAM protein, TIGR01212 family [Enterococcus sp. 7L76]
          Length = 322

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     +   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGI---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|149179348|ref|ZP_01857907.1| probable MiaB protein-putative tRNA-thiotransferase [Planctomyces
           maris DSM 8797]
 gi|148841820|gb|EDL56224.1| probable MiaB protein-putative tRNA-thiotransferase [Planctomyces
           maris DSM 8797]
          Length = 510

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 17/237 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V   +  +++  +S    +  ++ L           G    S    Q
Sbjct: 203 CDKFCSYC----VVPSTRGPEQS--RSPREILSEVKVLADQGVKEVTLLGQTVNSYKHTQ 256

Query: 88  N--IALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +  +  + D +     V     I  + + P  +  +  +  R        + + +Q    
Sbjct: 257 DGKLFRLSDLLYLIHDVEGISRIKFVTSYPKDMTTDLLEAIRDLPKATRYLHVPLQHGCN 316

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +   +    +     I     +S D I   P +T    ++ L+    +   
Sbjct: 317 DVLKVMKRGYTVEDYREMMQRVNEILPGCSVSSDFIVGHPGETEESHQLSLESIREFRFK 376

Query: 201 HLSLYQLTIEKGT----LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +  +++ +   GT     F     D      +  +      +++   +       E+
Sbjct: 377 NSFIFKYSERPGTKAAERFKDEIPDAVKKRRNNEMLAVQNQISEEDNAEFIGKQVEV 433


>gi|90421124|ref|ZP_01229026.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334616|gb|EAS48396.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 440

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V     +      +           +    +G   P   +
Sbjct: 150 CDHRCTFCVIPFG-RGNSRSVPMGAAVDQVKRLVAAGYNEVVLSGVDMTSWGADLPGAPK 208

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRISLGVQSL 140
              +   IL  +     +  +   ++EA+P+ +E               +  + L +Q+ 
Sbjct: 209 LGQLVQAILRHVPDLARLRLSSIDSVEADPALIEAIGSETRL-------MPHLHLSLQAG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H+  +AI      R   P +    D+I   P +T   +E  ++      
Sbjct: 262 DDMILKRMKRRHSRDDAIGFCTDIRAARPDIVYGADIIAGFPTETDAMFENSMKLVEDCG 321

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + HL ++  +  +GT   +M +
Sbjct: 322 LTHLHVFPFSPREGTPAARMPQ 343


>gi|332976877|gb|EGK13699.1| tRNA-I(6)A37 modification enzyme MiaB [Desmospora sp. 8437]
          Length = 495

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  L E++ + +  G R ++    ++   G     
Sbjct: 204 CDKFCTYC---IVPYTRGKERSRRPEDVLAEIRDLAR-KGYREVTLLGQNVNAYGKDF-- 257

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                     D +     +         ++P   + +  +   + G  V  I L  QS  
Sbjct: 258 --EDRDYRFGDLMEDVRKIGIPRVRFTTSHPRDFDDHLIEVLARRGNLVEHIHLPAQSGN 315

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +     +  +   +   P +    D+I   P +T  Q+E  L        
Sbjct: 316 NAILKIMARKYTRERFLELVAKIKAAIPDVVLTTDIIVGYPGETEEQFEDTLSLMREVEF 375

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 376 DSAFTFIYSPREGTPAAKM 394


>gi|328944505|ref|ZP_08241966.1| histone acetyltransferase [Atopobium vaginae DSM 15829]
 gi|327490906|gb|EGF22684.1| histone acetyltransferase [Atopobium vaginae DSM 15829]
          Length = 658

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 3/129 (2%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           V + IE  P ++ V +    R  G  ++ +G+Q L E+  +   R  +  +   A  L R
Sbjct: 323 VGLVIETRPDTISVEHLYLMRALGCTKVQMGIQVLNEEIRQRNLRKGSLDDIKQAFELLR 382

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALS---YAVDHLSLYQLTIEKGTLFYKMHKDG 222
               ++    +  L   T    + + +  +    Y  D + LY   +         ++ G
Sbjct: 383 LFGFKIHVHAMVNLLGSTPDIDKKDFKMLVHDSLYLPDEVKLYPCVLVDSARLKACYERG 442

Query: 223 DLVLPSENV 231
                +E  
Sbjct: 443 LWQAYTEEE 451


>gi|240013351|ref|ZP_04720264.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae DGI18]
 gi|240015796|ref|ZP_04722336.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae FA6140]
 gi|240112139|ref|ZP_04726629.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae MS11]
 gi|240117089|ref|ZP_04731151.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae PID1]
 gi|240120424|ref|ZP_04733386.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria gonorrhoeae PID24-1]
 gi|268598198|ref|ZP_06132365.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268602776|ref|ZP_06136943.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268582329|gb|EEZ47005.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268586907|gb|EEZ51583.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 442

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   L E+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLAEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 DGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|319937480|ref|ZP_08011885.1| 2-methylthioadenine synthetase [Coprobacillus sp. 29_1]
 gi|319807320|gb|EFW03929.1| 2-methylthioadenine synthetase [Coprobacillus sp. 29_1]
          Length = 438

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 84/231 (36%), Gaps = 13/231 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC            +    +S L + Q +        + + I   G        
Sbjct: 155 CNNFCTYC---IIPYARGQIRSRTPESVLKQAQSLVDHGFVEIVLTGIHTAGYGQDFENY 211

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               L++D   K   +      +IE +   +          +   V+ + + +QS  + +
Sbjct: 212 SFYDLLVDLTTKIKGLKRLRISSIEMS--QITQEIIDLIAMSPIIVDHLHIPIQSGCDAT 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++  +E    +   +   P +S   D+I   P +T  +++   Q       + L
Sbjct: 270 LKRMNRHYTTAEFSDKLRDLKEKLPSLSVTTDVIVGFPGETEEEFQQTYQWIEKMHFNQL 329

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  +I KGT   +M    D  +  + V   + +L+Q +       +Y+I
Sbjct: 330 HVFPYSIRKGTPAARMKDQIDGHVKHDRVKSLM-DLSQRL--QSEFASYQI 377


>gi|154706007|ref|YP_001424838.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii Dugway 5J108-111]
 gi|229890504|sp|A9KCP2|MIAB_COXBN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|154355293|gb|ABS76755.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii Dugway
           5J108-111]
          Length = 439

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 8/202 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +     F            Q     ++           L+   
Sbjct: 156 CSKYCTFC--VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNVNDYC-GLMHDG 212

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +A +   I     + +   I     +PS+   N    Y +     N + L VQS  ++ 
Sbjct: 213 QVADLALLIHYLAAMDNIERIRFTTSHPSAFSENLIDAYAEEPKLANHLHLPVQSGSDRI 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + RN+   E  + I   R + P +S   D I   P +T   +E  +        DH 
Sbjct: 273 LAAMKRNYTVLEYKSKIRKLRAVRPDISLSSDFIIGFPGETDADFEATMNLIHDMGFDHS 332

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
             +  +   GT   ++  D  +
Sbjct: 333 FSFIYSPRPGTPAAQLPDDVPM 354


>gi|153954068|ref|YP_001394833.1| hypothetical protein CKL_1443 [Clostridium kluyveri DSM 555]
 gi|238065368|sp|A5N854|RIMO_CLOK5 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|146346949|gb|EDK33485.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 446

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 73/231 (31%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     +    +  +         R +  +       +     
Sbjct: 157 CDNYCTYC----IIPKIRGK---YRSRSIENILQECNELSLRGVKEVILIAQDTTRYGID 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ--GYRKAGVNRISLGVQSL 140
           L   + +  ++  I+K   +       +   P  +  +            N I + +Q +
Sbjct: 210 LYNKKMLPELMRSISKIEGIEWIR--LLYCYPEEITEDIIDEIALNDKVCNYIDIPLQHI 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR     + +  I+  R     +S    +I   P ++   ++       +  
Sbjct: 268 SDNILKLMGRRGRKKDILRNINELRKKINDISIRTTIIVGFPGESEEDFKELKNFIENIK 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            D+L +++ + E+GT  YKM       L +      +      I S     
Sbjct: 328 FDNLGVFKYSREEGTRAYKMKDQVSEELKTAREGELMMLQKHIIYSMQKYK 378


>gi|124026950|ref|YP_001012270.1| radical SAM family Fe-S oxidoreductase [Hyperthermus butylicus DSM
           5456]
 gi|123977644|gb|ABM79925.1| Fe-S oxidoreductase, Radical SAM superfamily [Hyperthermus
           butylicus DSM 5456]
          Length = 528

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 28/215 (13%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGG-- 78
            P C     YC   S +  Y   +   I     E++ +      R +      + +G   
Sbjct: 219 IPGCA----YC---SVIPLYGYARSRSIDHVYEEVKELIDQGVHRIVLSGPDFLDYGRDW 271

Query: 79  -GTPS-LIEPQN-------IALILDGIAKNWTVSSN-VEITIE-ANPSSVEVNNFQGY-R 126
              PS L++P+N       IA +L  I     VSS  V + +E   P+ V         R
Sbjct: 272 LVEPSPLLDPRNPPPNTKAIAELLRRITAIPEVSSGEVSVMVENIKPNLVNDEVVLVLGR 331

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
                 + +G ++ + + L  LGR+    E + A+ L R    R    ++Y LP +T   
Sbjct: 332 YLRGTPVHIGAETGDNKLLEALGRSATVYEVVKAVRLLRRHGLRPYVYIMYCLPGETSRT 391

Query: 187 WEMELQRALSY---AVDHLSLYQLTIEKGTLFYKM 218
               ++          + +++Y+ T    +  +K+
Sbjct: 392 IRQTVEYMEKLYNAGAEKITVYKFTPLPLSYLHKL 426


>gi|315641875|ref|ZP_07896867.1| TIGR01212 family radical SAM protein [Enterococcus italicus DSM
           15952]
 gi|315482443|gb|EFU72983.1| TIGR01212 family radical SAM protein [Enterococcus italicus DSM
           15952]
          Length = 335

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 10/199 (5%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +   Q F  E+  M Q     +   ++F   T +    + I  
Sbjct: 59  CTFCSVSGSGDMIVAPHDPLPQQFYKEIDQMHQKWPGVAQYIVYFQNFTNTHAPVEVIRE 118

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     +   V ++I   P  +            +     + LG+Q+  EQ+   +
Sbjct: 119 RFEQV---VNLPGVVGLSIGTRPDCLPDEVVDYLAELNERLYLWVELGLQTTFEQTSTLI 175

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R+   R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 176 NRAHSYDTYLEGVAKLRSHGIRVCTHLINGLPGETYDMMVENVRRTIHDADIQGIKLHLL 235

Query: 208 TIEKGTLFYKMHKDGDLVL 226
            + + T   + + +G L L
Sbjct: 236 HLMRNTRMIRDYHEGRLQL 254


>gi|315159951|gb|EFU03968.1| radical SAM protein family [Enterococcus faecalis TX0312]
          Length = 322

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSTAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGHLQLMSKEA 252


>gi|313888326|ref|ZP_07821997.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845729|gb|EFR33119.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 466

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 15/205 (7%)

Query: 22  YVHWPF-CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQ-WMRQLTGPRSISSIFFG 77
           YV+  + C   C YC     +  Y  G+E        + E++   R  T   ++      
Sbjct: 176 YVNIMYGCNNFCSYC-----IVPYTRGRETSRRPGEIIREIEDLARHGTKEVTLLGQNVN 230

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
               +L E  + A +L+ I     +       + ++P  +       ++      N + L
Sbjct: 231 SYGKTLDEKFSFANLLEEINDIKGIERIRF--MTSHPKDISDELIYSFKNLDKLCNFLHL 288

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQ+   + L+ + R +   + +  I   +++ P +  S D++   P ++   +   L  
Sbjct: 289 PVQAGSSRVLKMMNRKYTREDYLRKIDKVKSLNPNIALSTDIMVGFPGESEEDFLDTLDL 348

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                 D    +  ++ + T     
Sbjct: 349 VKKVEYDTAFTFIYSVRENTPAANR 373


>gi|225174619|ref|ZP_03728617.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
           1]
 gi|225169746|gb|EEG78542.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
           1]
          Length = 457

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +     +  ++ L           G    S    +
Sbjct: 162 CNNFCSYC-----IVPYVRGRERS-RKPEEIINEIKALAKQGFKEVTLLGQNVNSY--GK 213

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++   +D       V    +I     + ++P        +   +       + L +Q+  
Sbjct: 214 DLEEEMDFADLLVRVDRETDINRIRFMTSHPRDFTEKLAKVMGECDSVCEHVHLPIQAGS 273

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  + + R   P   +S D+I   P +T   +   L        
Sbjct: 274 NRILKLMNRGYTKEHYLDLVDILRKYAPDCALSTDIIVGFPGETEEDFLDTLDVVDRVGY 333

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           D    +  +   GT    M   
Sbjct: 334 DMAFTFLYSPRSGTPAADMPHQ 355


>gi|225010050|ref|ZP_03700522.1| RNA modification enzyme, MiaB family [Flavobacteria bacterium
           MS024-3C]
 gi|225005529|gb|EEG43479.1| RNA modification enzyme, MiaB family [Flavobacteria bacterium
           MS024-3C]
          Length = 482

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 75/208 (36%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWM-------RQLTGPRSISSIFFGG 78
           C   C +C     V  +  G+E      S LTE+Q +         L G    S +++GG
Sbjct: 178 CDNMCTFC-----VVPFTRGRERSRDPLSILTEIQDLWDKGYKEMTLLGQNVDSYLWYGG 232

Query: 79  GT------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           G        + +      N + +L+ +A              +NP  + ++  +      
Sbjct: 233 GLKKDFNKATQMAQATAVNFSQLLEKVA--LKFPEMRIRFSTSNPQDMTLDVVRTMAAHS 290

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L VQS   + L+ + R H   E +A I   R I P   +S D+I   P +T  
Sbjct: 291 NICKHIHLPVQSGSNRILKAMNRQHTREEYMALIDNIRAIIPDCAISQDMIIGFPNETEE 350

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGT 213
             +  L        D   +Y  +   GT
Sbjct: 351 DHKDTLSLMEYVKYDFGYMYSYSDRPGT 378


>gi|291547108|emb|CBL20216.1| radical SAM protein, TIGR01212 family [Ruminococcus sp. SR1/5]
          Length = 313

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS--IFFGGGTPSLIEPQN 88
           C +C              N   S   ++   ++ L+  R I     +F   T +    ++
Sbjct: 47  CIFCSQ----GGSGDFAANAALSITEQINTQIKSLSSKRPIHKYIAYFQAYTNTYAPVEH 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I      +  +   V ++I   P  +  +           +   + LG+Q++ E + 
Sbjct: 103 LRKIFTEAISHPDI---VALSIGTRPDCLGDDVLDLLYSLNQIKPVWVELGLQTIHEDTA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R++ R +  S    A+   R     +    I  LP ++       +    +  +  + L 
Sbjct: 160 RYIRRGYPLSCFDTAVKNLRAGGIEVIVHTILGLPGESRKDILETMAYLNAMDIQGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            L + +GT       D +  L       +  NL       
Sbjct: 220 LLHVLRGTDLA---ADHEAGLFRTYERDEYLNLVIDCLEH 256


>gi|284162243|ref|YP_003400866.1| MiaB-like tRNA modifying enzyme [Archaeoglobus profundus DSM 5631]
 gi|284012240|gb|ADB58193.1| MiaB-like tRNA modifying enzyme [Archaeoglobus profundus DSM 5631]
          Length = 423

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 21/206 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C   +   R ++     E+ +      ++   +     S  +  +G      +
Sbjct: 147 CTGRCSFCA--TRFARGRLRSFKFESIVDEVRKCVENGFKEIQITSQDTGAYGLDKGRYM 204

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG-----VNRISLGVQ 138
            P  +  I         +  +  + +   NP    V        A         I + VQ
Sbjct: 205 LPDLLRAI-------SEIEGDFRVRVGMMNPRHA-VEMLDDLLNAFESEKMYKFIHIPVQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S +E  LR + R+H+  + I  +   R  F    +S D+I   P +T   +    +   +
Sbjct: 257 SGDENVLRDMNRDHSVEDFIEVVKAFRRRFDDVMVSTDVIVGFPTETEEAFWRTYELIKN 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDG 222
              D +++ + +    T  YK+ +  
Sbjct: 317 VEPDIVNITRFSKRPFTPAYKLKEIH 342


>gi|269468093|gb|EEZ79803.1| 2-methylthioadenine synthetase [uncultured SUP05 cluster bacterium]
          Length = 441

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 20/196 (10%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F                  + E+Q +    G R ++ +      + G    L++
Sbjct: 158 CSKYCTFCVVPYTRGEEVSRPFDDVIKEVQILANQ-GVREVNLLGQNVNAYQG----LMD 212

Query: 86  PQN---IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +AL+++ +A+   +      T  ++P     +  Q Y +    V+ + L +QS 
Sbjct: 213 DGQSADLALLINLVAQINGIDRIRYTT--SHPVEFSDSLIQAYAEVPELVSHLHLPIQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R I P +S   D I   P +T   +   ++      
Sbjct: 271 SDKILTLMKRGHTALEYKSKIRRLREIRPDISISSDFIIGFPGETKQDFNDTMKVINDIG 330

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 331 FDKSFSFIYSPRPGTP 346


>gi|159038505|ref|YP_001537758.1| radical SAM domain-containing protein [Salinispora arenicola
           CNS-205]
 gi|157917340|gb|ABV98767.1| Radical SAM domain protein [Salinispora arenicola CNS-205]
          Length = 625

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 82/241 (34%), Gaps = 13/241 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C        +       +++F +  ++   +L G   + +I        ++  
Sbjct: 194 CPYKCAFC-------YWGGATGQKVRAFSIERLRAELELFGKLGVHTIVACDANFGILPG 246

Query: 87  Q-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQS 144
             +    +    + +     +E +   N S       +  ++AG+ +  +L +Q+L + +
Sbjct: 247 DYDFVKTMIQTRERYGFPRALETSWAKNKSENFYRIVRLMKQAGMKSSFTLALQTLHDGA 306

Query: 145 LRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R     +E         +       +LI+  P +T+  +       L+  +  ++
Sbjct: 307 LEAMRRRNMKVNEWEDLTAWLADEGLDCYAELIWGAPGETVESFM-TGYDKLATRMSRIA 365

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNHSFLGAE 262
           +Y L +   T +        +     +     Y L     +       +     + + AE
Sbjct: 366 VYPLLLLPNTDYMDKKDQFGITSVRGDDDDFEYILAHDTMTFAENQQMQHFIFWARVVAE 425

Query: 263 S 263
           +
Sbjct: 426 N 426


>gi|148260830|ref|YP_001234957.1| radical SAM domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146402511|gb|ABQ31038.1| Radical SAM domain protein [Acidiphilium cryptum JF-5]
          Length = 474

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 12/229 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFGGGTPSLIEP 86
           C  +C +C +   V  ++       +S    +  ++Q+      +  +FF   T +    
Sbjct: 207 CKSRCTFCLWPQTVGGHRYRT----RSVEHVIAEVKQIQRDFPQMRELFFDDDTFT---- 258

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N+        +   +        +AN   V  +  +  R  G+  + +G +S  +Q L 
Sbjct: 259 DNLPRAEAIARELGKLGVTWSCNAKAN---VPRDTLKVLRDNGLRLLLVGYESGNQQILH 315

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +      A        ++  ++    I  LP +T       +  A       + +  
Sbjct: 316 NIKKGMRIEVAKKFTKDCHDLGIKIHGTFILGLPGETQDTIRETIDFAKEINPHTIQVSL 375

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                GT  Y    +   +  +    +D + +  +      L   EI +
Sbjct: 376 AAPYPGTFLYNQAVENGWLDAAHAELIDDHGIQIAPLHYPHLTHTEIFD 424


>gi|168186342|ref|ZP_02620977.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum C
           str. Eklund]
 gi|169295705|gb|EDS77838.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum C
           str. Eklund]
          Length = 447

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E         +  ++ L           G    S    +
Sbjct: 166 CNNFCSYC-----IVPYVRGRERSRDP-KNIIDEIKDLVSKGYKEITLLGQNVNSYGKGL 219

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           EP+     L  +         +   + ++P  V     +   +      +    +QS   
Sbjct: 220 EPEISFADLLRMVNKIDGLERIRF-MTSHPKDVSDELIEAMAECDKVCEQGHFALQSGST 278

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R +   + +  +   R   P +    D+I   P +T   +E  L        D
Sbjct: 279 EVLEKMNRKYTREDYLTLVKKLRKTMPNVGISTDIIIGYPGETEKDFEDTLSIVKEIEFD 338

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +  +GT   K+
Sbjct: 339 SAFTFIYSKREGTPAAKL 356


>gi|114769928|ref|ZP_01447538.1| MiaB-like tRNA modifying enzyme [alpha proteobacterium HTCC2255]
 gi|114549633|gb|EAU52515.1| MiaB-like tRNA modifying enzyme [alpha proteobacterium HTCC2255]
          Length = 420

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 25/207 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 149 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDTGYNEVVLTGVDITSWGADLP 203

Query: 82  SLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEV--NNFQGYRKAGVNRISLG 136
             + P     +  IL  +     +  +   +IEA+P+ ++   +  +         + L 
Sbjct: 204 --MVPKLGDLVQRILKLVPDLPRLRISSIDSIEADPALIDAISSEMRLM-----PHLHLS 256

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R H   +AI      R++ P +    D+I   P +T   +E  L   
Sbjct: 257 LQAGDDMILKRMKRRHLRDDAIEFCSKMRSVRPNIVYGADIIAGFPTETEEMFENSLNLI 316

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKD 221
               +  L ++  +  +GT   +M + 
Sbjct: 317 KECGLTWLHVFPFSPREGTPAARMPQM 343


>gi|91785150|ref|YP_560356.1| tRNA-i(6)A37modification enzyme MiaB [Burkholderia xenovorans
           LB400]
 gi|123168088|sp|Q13UD5|MIAB_BURXL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91689104|gb|ABE32304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia xenovorans
           LB400]
          Length = 457

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++       +L
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRAGLTL 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTEIADFAQLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S DLI   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEEDFDKMMTLVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 KYDTSFSFIYSPRPGTPAANLH 352


>gi|23016883|ref|ZP_00056635.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 470

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +      +E  +   L E+Q++ +  G      +       + ++ +
Sbjct: 201 CKAHCSFC--YKFMGDGIGLRE--VGEVLDEIQYIMENYGITKFYFVDE-----NFMQIK 251

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                     KN  +  N      +    ++       ++ G+  ++ GV+S+ + +L  
Sbjct: 252 KYFYSFLEEKKNRGL--NFTFIASSRIDEIDEERISIAKEHGLTALTTGVESVNQATLNA 309

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH-LSLYQ 206
           + +  +  +A  A+ L R    R   +LI     ++   ++  L+      +   + L  
Sbjct: 310 IDKRIDIEDAERAVKLLRQYGIRPHVNLIIGFEWESEDDYKAMLEFIERNDLRGTVKLSY 369

Query: 207 LTIEKGTLFYK-MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           LT    T  Y+       L  P       L NL   +         E+  H + 
Sbjct: 370 LTPLPATRLYEDAKSRNKLGKPEFEYVRTLGNLYWELMVNMTNMPDELLKHYYA 423


>gi|327534382|gb|AEA93216.1| radical SAM protein [Enterococcus faecalis OG1RF]
          Length = 322

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  ++Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKKIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|300814368|ref|ZP_07094639.1| iron-only hydrogenase maturation rSAM protein HydE [Peptoniphilus
           sp. oral taxon 836 str. F0141]
 gi|300511476|gb|EFK38705.1| iron-only hydrogenase maturation rSAM protein HydE [Peptoniphilus
           sp. oral taxon 836 str. F0141]
          Length = 342

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 72/194 (37%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N + +R ++ +E+ ++          +      I ++   GG     
Sbjct: 61  CKNNCYYCGLRSDNKNTQRIRLKKEDILK--------RAEAGYKMGIRTLVMQGGEDPFY 112

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  I+  +     +  ++ IT+     S    +F+ +++AG +R  L  ++ +   
Sbjct: 113 TKDYMVDIIKTLK---NIYPDIAITLSLGERSF--EDFKAFKEAGADRYLLRHETYDRGH 167

Query: 145 LRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            + L  R  +    I  ++  +++  +    ++   P Q +     +L+  L      + 
Sbjct: 168 YQALHPREMSFDNRIECLYNLKSLGFQTGCGMMIGSPYQKIENVYKDLELILKLKPQMVG 227

Query: 204 LYQLTIEKGTLFYK 217
           L     +K + F  
Sbjct: 228 LGPFIAQKDSPFNN 241


>gi|253734456|ref|ZP_04868621.1| conserved hypothetical radical SAM protein [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253727510|gb|EES96239.1| conserved hypothetical radical SAM protein [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 317

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +            + LG
Sbjct: 99  TNTHAPVEVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTIHQSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L + KGT   K +  G L   ++  
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEE 250


>gi|222527298|ref|YP_002571769.1| Radical SAM domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|222451177|gb|ACM55443.1| Radical SAM domain protein [Chloroflexus sp. Y-400-fl]
          Length = 578

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HV      +       L EM  ++++     +  I F     ++    
Sbjct: 303 CPAGCRYC--IKHVTYQSSVRHRSPHHVLQEMVMLKEMG----MHHIHFEADLFTV---- 352

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D           +  +  +    V+ +  +  RKAG   I+ G++S  E+ L+ 
Sbjct: 353 KKEFVYDLCHTIIKEGLKLRWSCNSRVDFVDEDELRLMRKAGCFMIAWGLESGSEEVLKR 412

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFD-LIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             +          I  +      M++   I  LP +T+   +  +  +    +D    + 
Sbjct: 413 ARKGTTVKRIEETIAASHRAGI-MNWGYFIIGLPGETVETIQQTIALSKRLPLDIALFHI 471

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            T   GT FY        +  ++    D+Y+ T
Sbjct: 472 ATPYPGTPFYYEAVANGWIRMNQWEDYDMYSHT 504


>gi|49474821|ref|YP_032863.1| hypothetical protein BQ13490 [Bartonella quintana str. Toulouse]
 gi|49240325|emb|CAF26807.1| hypothetical protein BQ13490 [Bartonella quintana str. Toulouse]
          Length = 427

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 21/206 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    +      ++ ++QLT           +    +G   
Sbjct: 150 CDHRCTFC-----IIPYGRGPSRSVP-MGAVIEQIKQLTNNGIQEVILTGVDLTSYGHDL 203

Query: 81  P--SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           P  + +  + I+ IL  ++    +  +   +IEA+   +       Y K  +  + L +Q
Sbjct: 204 PGKTTLG-KLISTILHHVSDLPRLRLSSIDSIEADQELIN---LLAYEKRIMPHLHLSLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           + +   L+ + R H    AI       A+        DLI   P +T   ++  L     
Sbjct: 260 AGDNMILKRMKRRHLREHAIQFCQDLRAKRPTMVYGADLIAGFPTETEEMFQNSLALVNE 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDG 222
             + HL ++  +  +GT   +M +  
Sbjct: 320 CNLIHLHVFPFSPREGTPAARMPQIN 345


>gi|17545250|ref|NP_518652.1| hypothetical protein RSc0531 [Ralstonia solanacearum GMI1000]
 gi|81506472|sp|Q8Y206|MIAB_RALSO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|17427541|emb|CAD14059.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
          Length = 457

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F            Q         +++++     G  S
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYIGKMGGTS 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P        + Y   +  V+ + L VQ  
Sbjct: 214 --ERADFALLLEYVAEIPGIERIRYTT--SHPKEFTARLIEAYATNRKLVDHLHLPVQHG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I   R I P +S   D I   P +T   +   +       
Sbjct: 270 SDRILMAMKRGYTVLEYKSIIRKLRAIRPDISIATDFIVGFPGETDADFAKTMDLVHEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 330 YDNSFSFIYSPRPGTPAANLH 350


>gi|34581161|ref|ZP_00142641.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262546|gb|EAA26050.1| unknown [Rickettsia sibirica 246]
          Length = 445

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 18/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----LTGPRSISSIFFGGGTPS 82
           C K C +C       R      N  Q F   ++ +       +   +++++    G    
Sbjct: 162 CDKFCTFC--VVPYTRGAEFSRNVEQVFREALKVVSSGAKEIMLLGQNVNAYHGKG---- 215

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I  + D +     + +   +     +P  +  +  + Y      +  + L VQS
Sbjct: 216 --PADKIFSLADLLKHLAQIPNLERLRYTTSHPIDMNNDLIKLYGTEPKLMPFLHLPVQS 273

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R H+       IH  R   P +  S D I   P +T   +E  L      
Sbjct: 274 GSNKILKAMNRKHDREYYFDIIHRLREARPDIVLSSDFIVGFPGETDEDFEGTLDLVRRV 333

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  ++ +   GT            + SE + +    L     + +
Sbjct: 334 KYGQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQQELMAQQLAFN 382


>gi|15924752|ref|NP_372286.1| hypothetical protein SAV1762 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927337|ref|NP_374870.1| hypothetical protein SA1581 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283432|ref|NP_646520.1| hypothetical protein MW1703 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486585|ref|YP_043806.1| hypothetical protein SAS1686 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652058|ref|YP_186643.1| hypothetical protein SACOL1810 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82751348|ref|YP_417089.1| hypothetical protein SAB1620 [Staphylococcus aureus RF122]
 gi|87161875|ref|YP_494400.1| hypothetical protein SAUSA300_1706 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195574|ref|YP_500380.1| hypothetical protein SAOUHSC_01877 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268238|ref|YP_001247181.1| hypothetical protein SaurJH9_1815 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394306|ref|YP_001316981.1| hypothetical protein SaurJH1_1850 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221865|ref|YP_001332687.1| hypothetical protein NWMN_1653 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980079|ref|YP_001442338.1| hypothetical protein SAHV_1748 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509978|ref|YP_001575637.1| hypothetical protein USA300HOU_1751 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141484|ref|ZP_03565977.1| hypothetical protein SauraJ_07568 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315865|ref|ZP_04839078.1| hypothetical protein SauraC_06912 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253732413|ref|ZP_04866578.1| conserved hypothetical radical SAM protein [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|255006548|ref|ZP_05145149.2| hypothetical protein SauraM_08765 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794143|ref|ZP_05643122.1| radical SAM protein [Staphylococcus aureus A9781]
 gi|258415847|ref|ZP_05682118.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258420676|ref|ZP_05683615.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258438326|ref|ZP_05689610.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443784|ref|ZP_05692123.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445995|ref|ZP_05694171.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A6300]
 gi|258448277|ref|ZP_05696404.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A6224]
 gi|258452311|ref|ZP_05700324.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A5948]
 gi|258454195|ref|ZP_05702166.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A5937]
 gi|262049069|ref|ZP_06021947.1| hypothetical protein SAD30_2274 [Staphylococcus aureus D30]
 gi|269203398|ref|YP_003282667.1| hypothetical protein SAAV_1771 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893254|ref|ZP_06301488.1| radical SAM protein [Staphylococcus aureus A8117]
 gi|282925647|ref|ZP_06333296.1| radical SAM protein [Staphylococcus aureus A9765]
 gi|282927889|ref|ZP_06335500.1| radical SAM protein [Staphylococcus aureus A10102]
 gi|284024807|ref|ZP_06379205.1| hypothetical protein Saura13_09450 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294849921|ref|ZP_06790660.1| radical SAM protein [Staphylococcus aureus A9754]
 gi|295406071|ref|ZP_06815879.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A8819]
 gi|296276046|ref|ZP_06858553.1| hypothetical protein SauraMR_06842 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297207525|ref|ZP_06923961.1| radical SAM protein [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245004|ref|ZP_06928881.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A8796]
 gi|300911609|ref|ZP_07129053.1| radical SAM protein [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380645|ref|ZP_07363316.1| radical SAM protein [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|13701556|dbj|BAB42849.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247534|dbj|BAB57924.1| similar to Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21204873|dbj|BAB95568.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245028|emb|CAG43489.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286244|gb|AAW38338.1| conserved hypothetical protein TIGR01212 [Staphylococcus aureus
           subsp. aureus COL]
 gi|82656879|emb|CAI81309.1| conserved hypothetical protein [Staphylococcus aureus RF122]
 gi|87127849|gb|ABD22363.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203132|gb|ABD30942.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741307|gb|ABQ49605.1| conserved hypothetical radical SAM protein [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946758|gb|ABR52694.1| conserved hypothetical radical SAM protein [Staphylococcus aureus
           subsp. aureus JH1]
 gi|150374665|dbj|BAF67925.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722214|dbj|BAF78631.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160368787|gb|ABX29758.1| hypothetical protein USA300HOU_1751 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253723803|gb|EES92532.1| conserved hypothetical radical SAM protein [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257788115|gb|EEV26455.1| radical SAM protein [Staphylococcus aureus A9781]
 gi|257839440|gb|EEV63913.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257843280|gb|EEV67690.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257848370|gb|EEV72361.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851190|gb|EEV75133.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257855237|gb|EEV78176.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A6300]
 gi|257858516|gb|EEV81392.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A6224]
 gi|257860036|gb|EEV82871.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A5948]
 gi|257863647|gb|EEV86404.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A5937]
 gi|259162886|gb|EEW47450.1| hypothetical protein SAD30_2274 [Staphylococcus aureus D30]
 gi|262075688|gb|ACY11661.1| hypothetical protein SAAV_1771 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941238|emb|CBI49626.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282590399|gb|EFB95478.1| radical SAM protein [Staphylococcus aureus A10102]
 gi|282592427|gb|EFB97441.1| radical SAM protein [Staphylococcus aureus A9765]
 gi|282764572|gb|EFC04698.1| radical SAM protein [Staphylococcus aureus A8117]
 gi|285817442|gb|ADC37929.1| Predicted Fe-S oxidoreductase [Staphylococcus aureus 04-02981]
 gi|294823260|gb|EFG39690.1| radical SAM protein [Staphylococcus aureus A9754]
 gi|294969068|gb|EFG45089.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A8819]
 gi|296887861|gb|EFH26758.1| radical SAM protein [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178084|gb|EFH37332.1| TIGR01212 family radical SAM protein [Staphylococcus aureus A8796]
 gi|298695028|gb|ADI98250.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887030|gb|EFK82231.1| radical SAM protein [Staphylococcus aureus subsp. aureus TCH70]
 gi|302751587|gb|ADL65764.1| putative Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340752|gb|EFM06681.1| radical SAM protein [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830138|emb|CBX34980.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315130600|gb|EFT86586.1| hypothetical protein CGSSa03_10165 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315197230|gb|EFU27569.1| hypothetical protein CGSSa01_01066 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140773|gb|EFW32624.1| radical SAM protein family [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143788|gb|EFW35562.1| radical SAM protein family [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439584|gb|EGA97304.1| hypothetical protein SAO11_1597 [Staphylococcus aureus O11]
 gi|329314436|gb|AEB88849.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727023|gb|EGG63480.1| radical SAM protein, TIGR01212 family [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329727277|gb|EGG63733.1| radical SAM protein, TIGR01212 family [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329733075|gb|EGG69412.1| radical SAM protein, TIGR01212 family [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 317

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +            + LG
Sbjct: 99  TNTHAPVEVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTIHQSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L + KGT   K +  G L   ++  
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEE 250


>gi|261211993|ref|ZP_05926279.1| tRNA-i(6)A37 methylthiotransferase [Vibrio sp. RC341]
 gi|260838601|gb|EEX65252.1| tRNA-i(6)A37 methylthiotransferase [Vibrio sp. RC341]
          Length = 474

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 75/232 (32%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 211 -HDGEICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I A P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVAFPGETDKDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    LP E     LY L Q I S    ++
Sbjct: 330 FDMSFSFIFSPRPGTPAA----DYPCDLPEEVKKERLYELQQQINSQAMRYS 377


>gi|255690240|ref|ZP_05413915.1| radical SAM domain protein [Bacteroides finegoldii DSM 17565]
 gi|260624260|gb|EEX47131.1| radical SAM domain protein [Bacteroides finegoldii DSM 17565]
          Length = 379

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  +  + +   +Q       + +  GG  P ++   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLTQESILDCCKQGYESGFRTFVLQGGEDP-VLTDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  I+  I + +      +  I  +      N ++ + KAG NR  L  ++  E   + 
Sbjct: 117 KIERIVTNIRQEYP-----DCAITLSLGEKSRNTYERFFKAGANRYLLRHETYNEAHYQQ 171

Query: 148 LGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   H A  +    +  +   ++I  +    ++   P QT+     ++        + + 
Sbjct: 172 L---HPAEMSGKRRLQCLQDLKDIGYQTGTGIMVGSPGQTVEDIIEDILFIERLRPEMIG 228

Query: 204 LYQLTIEKGTLFYKMH 219
           +        T F +  
Sbjct: 229 IGPFLPHHDTPFAQCP 244


>gi|77919453|ref|YP_357268.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus
           DSM 2380]
 gi|77545536|gb|ABA89098.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus
           DSM 2380]
          Length = 432

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 71/198 (35%), Gaps = 8/198 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +   +    + +  Q      ++         ++ I  GG    L  
Sbjct: 149 CNAFCSYC----IIPHARGPSRSALPQQVVDQVCKFCTAGFPEIVLTGIHIGGYGNDLQP 204

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P ++A ++  +  +  VS     +IE    S+E+ +   + +       + +Q+ ++  L
Sbjct: 205 PLSLADLVRRLLDDTQVSRLRLGSIEPQEVSMELIDLVAHCERLCPHFHIPLQAGDDAVL 264

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+++  +    +     R     +  D+I   P +T   +   L       V HL 
Sbjct: 265 KAMNRHYSVKDFRNLVEGIKLRVPQAAIGLDIITGFPGETENAFANTLALVRDLPVTHLH 324

Query: 204 LYQLTIEKGTLFYKMHKD 221
           ++  +   GT    M   
Sbjct: 325 VFPFSKRPGTPAATMRHQ 342


>gi|296134800|ref|YP_003642042.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thiomonas intermedia K12]
 gi|295794922|gb|ADG29712.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thiomonas intermedia K12]
          Length = 439

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C K C YC       R +      +       +      G R ++ +  G    + +   
Sbjct: 157 CSKYCSYC--VVPYTRGEEVSRPLVDVLTEVAELAS--LGVREVTLL--GQNVNAWLGSG 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E ++ A +L+ +A+   +      T  ++P          Y +    VN + L VQ   +
Sbjct: 211 EGEDFAFLLECVAEIDGIERIRYTT--SHPKEFTQRLIDAYGRIPKLVNHVHLPVQHGSD 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + +   R + P +    D I   P +T   +   ++       D
Sbjct: 269 RILAAMKRGYTALEFKSIVRRLRAVRPDICIGSDFIVGFPGETEADFAQLMKLIEDMQFD 328

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +   GT    +
Sbjct: 329 ASFSFIFSPRPGTPAANL 346


>gi|221194392|ref|ZP_03567449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Atopobium rimae ATCC
           49626]
 gi|221185296|gb|EEE17686.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Atopobium rimae ATCC
           49626]
          Length = 455

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             +NP  +        ++    +  + L VQS   + L+ + R++   E +  +H  +  
Sbjct: 243 TSSNPKDLTDETIAAMKETPAVMPHLHLAVQSGSTRILKKMNRSYTREEYLDLVHRLKAA 302

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            P +  S D+I   P +T   +E  L      A      +  +   GT   K
Sbjct: 303 MPDIAFSTDIIVGFPGETEEDFEQTLSLVKEAAYSSAYTFIYSKRPGTPAAK 354


>gi|254513754|ref|ZP_05125815.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [gamma proteobacterium NOR5-3]
 gi|219675997|gb|EED32362.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [gamma proteobacterium NOR5-3]
          Length = 548

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       ++K  ++  ++  +  +  + +L     +         P++   +
Sbjct: 204 CPFTCSFCS------QWKFWRDYRVRDPIKVVDEIEKLVNEHEVGFFILADEEPTINRKK 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            I    + I +   +   V+  I    + +  +      YRKAG+  +SLG ++  +  L
Sbjct: 258 FIEFCEELIRR--DLPKRVKWGINTRVTDILRDEKLLPLYRKAGLVHVSLGTEAAAQMKL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     +   AI L R     +    I  L  +T    E   Q A  +  D  +  
Sbjct: 316 DQFNKETKVEDNKRAIQLLREADILIEAQFIVGLDNETPETLEETYQMAWEWQPDLANWA 375

Query: 206 QLTIEKGTLFYK 217
             T    T  ++
Sbjct: 376 MYTPWPFTPLFQ 387


>gi|229815230|ref|ZP_04445566.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM
           13280]
 gi|229809240|gb|EEP45006.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM
           13280]
          Length = 427

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 17/197 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIF----FGGGTPS 82
           C  +C YC     V + +  + +  + S L +++   +   P  + +      + G   S
Sbjct: 144 CNNRCSYC----IVWKARGPERSVPVASVLEQVRRAERAGIPEVVLTGVNLGAYDGVDAS 199

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQS 139
                 I  +LD I +   +      ++E  P  V           G      + L +QS
Sbjct: 200 D-SHVEIDELLDIILEQTNIPQVRLSSLE--PMDVHDRLIDAMVAGGERVAPFLHLPLQS 256

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
               +L  + R + A +  A +   R   P   +S D+I   P +T  ++          
Sbjct: 257 GCTATLERMNRPYTAEQYEAMVDRIRTKLPNAAISCDIIAGFPGETDEEFAESRALCERV 316

Query: 198 AVDHLSLYQLTIEKGTL 214
               + +++ +   GT 
Sbjct: 317 GFSRMHVFRYSARPGTP 333


>gi|34499604|ref|NP_903819.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|81654199|sp|Q7NQI8|MIAB_CHRVO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|34105455|gb|AAQ61810.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 444

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 77/237 (32%), Gaps = 19/237 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEPQ 87
           C  YC F               +  LTE+  +             ++    G  S  E  
Sbjct: 156 CSKYCSFCVVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMSDGEIA 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + AL+L+ + +   V      T  ++P          Y K    V+ + L VQS  ++ L
Sbjct: 216 DFALLLEYVHEVPGVERIRFTT--SHPREFSQRIIDCYAKLPKLVSHLHLPVQSGSDRVL 273

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R +   E  + I    A      +S D I   P +T   +E  L+       D   
Sbjct: 274 MAMKRGYTGLEYKSIIRKLRAIRPDLCLSSDFIIGFPGETEADFEQTLKLVRDCEFDFSF 333

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT            LP +    +     +++        Y I N S +G
Sbjct: 334 VFIYSPRPGTPAAN--------LPDDTPHAEKVRRLEALNEVIEAKGYAI-NQSMVG 381


>gi|294631817|ref|ZP_06710377.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. e14]
 gi|292835150|gb|EFF93499.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. e14]
          Length = 500

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 185 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 242

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 243 LVGEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNVEGLERVRF--TSPHPRDFTDD 300

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      ++ D+I
Sbjct: 301 VIAAMAETPNVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAIPHAAITTDII 360

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 361 VGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 402


>gi|167751324|ref|ZP_02423451.1| hypothetical protein EUBSIR_02310 [Eubacterium siraeum DSM 15702]
 gi|167655570|gb|EDR99699.1| hypothetical protein EUBSIR_02310 [Eubacterium siraeum DSM 15702]
          Length = 443

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 12/196 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   +Q    E+++            +   G   S    +
Sbjct: 162 CDRFCSYC---IIPTARGSVRSRSLQDITEEVRFQVSCGH----KEMVLVGINLSCYGQE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               + D I    +V     + + +  P  +   +               L +QS    +
Sbjct: 215 IGLRLADAIEAVCSVDGVERVRLSSLEPELLTDEDIARMAAQKKLCPHFHLSLQSGSSAT 274

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++   E    +   R  FP   ++ D++     +T  +++   + A       +
Sbjct: 275 LKRMNRHYTPDEYYDIVLRLRKAFPDCAITTDIMVGFAGETDEEFKESCEFAQKVGFAAM 334

Query: 203 SLYQLTIEKGTLFYKM 218
            ++  +I +GT   + 
Sbjct: 335 HVFTYSIREGTAAARR 350


>gi|160941130|ref|ZP_02088467.1| hypothetical protein CLOBOL_06023 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435691|gb|EDP13458.1| hypothetical protein CLOBOL_06023 [Clostridium bolteae ATCC
           BAA-613]
          Length = 352

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 74/237 (31%), Gaps = 32/237 (13%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF       +      I+     M  +++     S  S
Sbjct: 53  CPNRDGTLGTGGCIFCSQGGSGDF---AASRQTAVSRQIE---QAMAQVKRKMPDGSQGS 106

Query: 74  --IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
              +F   T +      +  +      +  V++   ++I   P  +E       +    N
Sbjct: 107 YIAYFQSYTNTYAPLPYLKQLFGEAVSHPAVAA---LSIGTRPDCLEPEVIGLLKDL--N 161

Query: 132 RI-----SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           R+      LG+Q++ + +  F+ R +       A+   +     +   +I  LP +T   
Sbjct: 162 RVKPVWVELGLQTIHDSTAAFIRRGYGLPVFEDALRRLKAAGLTVIVHVILGLPGETRLM 221

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               +       +D + L  L I KGT      +     + +    +D       I 
Sbjct: 222 MAETVHYLAQSPIDGIKLQLLHILKGTGLADYCRTNPFPMFTMEEYIDFVIDCVEIL 278


>gi|163849304|ref|YP_001637348.1| radical SAM domain-containing protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|163670593|gb|ABY36959.1| Radical SAM domain protein [Chloroflexus aurantiacus J-10-fl]
          Length = 583

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HV      +       L EM  ++++     +  I F     ++    
Sbjct: 308 CPAGCRYC--IKHVTYQSSVRHRSPHHVLQEMVMLKEMG----MHHIHFEADLFTV---- 357

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D           +  +  +    V+ +  +  RKAG   I+ G++S  E+ L+ 
Sbjct: 358 KKEFVYDLCHTIIKEGLKLRWSCNSRVDFVDEDELRLMRKAGCFMIAWGLESGSEEVLKR 417

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFD-LIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             +          I  +      M++   I  LP +T+   +  +  +    +D    + 
Sbjct: 418 ARKGTTVKRIEETIAASHRAGI-MNWGYFIIGLPGETVETIQQTIALSKRLPLDIALFHI 476

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            T   GT FY        +  ++    D+Y+ T
Sbjct: 477 ATPYPGTPFYYEAVANGWIRMNQWEDYDMYSHT 509


>gi|323442031|gb|EGA99667.1| hypothetical protein SAO46_2059 [Staphylococcus aureus O46]
          Length = 317

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +            + LG
Sbjct: 99  TNTHAPVEVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTIHQSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L + KGT   K +  G L   ++  
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEE 250


>gi|315161914|gb|EFU05931.1| radical SAM protein family [Enterococcus faecalis TX0645]
          Length = 322

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPIQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|18702425|emb|CAD23184.1| hypothetical protein [Wolinella succinogenes]
          Length = 218

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 14/201 (6%)

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +L+     +   ++ Y L              GD+ L   +    LY +   I     
Sbjct: 1   RRDLEIIKRLSPTQVTAYPLMSSPSVKSLIKRSIGDISL---DKEATLYRV---ILEELL 54

Query: 248 LHAYEISNHSF-LGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLK 306
               +IS+ +F    + + +     + +Y+GIG G+ S +    +    S     + +  
Sbjct: 55  GEYNQISSWAFSKKGDDIIDEYVVNHDEYVGIGSGSFSFLDGVLYTNTFS----LKEYAT 110

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNL--QR 364
            +      +          Q    LM+GL    G+  + +       +++   + L   R
Sbjct: 111 RIESGKMGLSRARKYGRLSQMQYRLMVGL-FGGGVHKESFSRQFKMPIEVGLFKELLFLR 169

Query: 365 QGFIERVQFSRLRCTQRGMTM 385
                R +   L  T +G  +
Sbjct: 170 CAGAIREKEGVLYPTLKGKYL 190


>gi|29375385|ref|NP_814539.1| hypothetical protein EF0795 [Enterococcus faecalis V583]
 gi|227517765|ref|ZP_03947814.1| radical SAM superfamily protein [Enterococcus faecalis TX0104]
 gi|227554911|ref|ZP_03984958.1| radical SAM superfamily protein [Enterococcus faecalis HH22]
 gi|229546651|ref|ZP_04435376.1| radical SAM superfamily protein [Enterococcus faecalis TX1322]
 gi|255971253|ref|ZP_05421839.1| radical SAM superfamily enzyme [Enterococcus faecalis T1]
 gi|255973872|ref|ZP_05424458.1| radical SAM superfamily enzyme [Enterococcus faecalis T2]
 gi|256617680|ref|ZP_05474526.1| radical SAM superfamily enzyme [Enterococcus faecalis ATCC 4200]
 gi|256761558|ref|ZP_05502138.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256854343|ref|ZP_05559707.1| radical SAM superfamily protein [Enterococcus faecalis T8]
 gi|256957339|ref|ZP_05561510.1| radical SAM superfamily enzyme [Enterococcus faecalis DS5]
 gi|257077665|ref|ZP_05572026.1| radical SAM superfamily protein [Enterococcus faecalis JH1]
 gi|257081053|ref|ZP_05575414.1| radical SAM superfamily enzyme [Enterococcus faecalis E1Sol]
 gi|257086150|ref|ZP_05580511.1| radical SAM superfamily enzyme [Enterococcus faecalis D6]
 gi|257089222|ref|ZP_05583583.1| radical SAM superfamily enzyme [Enterococcus faecalis CH188]
 gi|257415364|ref|ZP_05592358.1| radical SAM superfamily enzyme [Enterococcus faecalis AR01/DG]
 gi|294779822|ref|ZP_06745208.1| radical SAM protein, TIGR01212 family [Enterococcus faecalis PC1.1]
 gi|300859949|ref|ZP_07106037.1| radical SAM protein, TIGR01212 family [Enterococcus faecalis TUSoD
           Ef11]
 gi|307270145|ref|ZP_07551462.1| radical SAM protein family [Enterococcus faecalis TX4248]
 gi|307276224|ref|ZP_07557353.1| radical SAM protein family [Enterococcus faecalis TX2134]
 gi|307284440|ref|ZP_07564603.1| radical SAM protein family [Enterococcus faecalis TX0860]
 gi|307289508|ref|ZP_07569454.1| radical SAM protein family [Enterococcus faecalis TX0109]
 gi|307296182|ref|ZP_07576011.1| radical SAM protein family [Enterococcus faecalis TX0411]
 gi|312901666|ref|ZP_07760936.1| radical SAM protein family [Enterococcus faecalis TX0470]
 gi|29342845|gb|AAO80609.1| conserved hypothetical protein TIGR01212 [Enterococcus faecalis
           V583]
 gi|227074788|gb|EEI12751.1| radical SAM superfamily protein [Enterococcus faecalis TX0104]
 gi|227175967|gb|EEI56939.1| radical SAM superfamily protein [Enterococcus faecalis HH22]
 gi|229308218|gb|EEN74205.1| radical SAM superfamily protein [Enterococcus faecalis TX1322]
 gi|255962271|gb|EET94747.1| radical SAM superfamily enzyme [Enterococcus faecalis T1]
 gi|255966744|gb|EET97366.1| radical SAM superfamily enzyme [Enterococcus faecalis T2]
 gi|256597207|gb|EEU16383.1| radical SAM superfamily enzyme [Enterococcus faecalis ATCC 4200]
 gi|256682809|gb|EEU22504.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256709903|gb|EEU24947.1| radical SAM superfamily protein [Enterococcus faecalis T8]
 gi|256947835|gb|EEU64467.1| radical SAM superfamily enzyme [Enterococcus faecalis DS5]
 gi|256985695|gb|EEU72997.1| radical SAM superfamily protein [Enterococcus faecalis JH1]
 gi|256989083|gb|EEU76385.1| radical SAM superfamily enzyme [Enterococcus faecalis E1Sol]
 gi|256994180|gb|EEU81482.1| radical SAM superfamily enzyme [Enterococcus faecalis D6]
 gi|256998034|gb|EEU84554.1| radical SAM superfamily enzyme [Enterococcus faecalis CH188]
 gi|257157192|gb|EEU87152.1| radical SAM superfamily enzyme [Enterococcus faecalis ARO1/DG]
 gi|294453096|gb|EFG21512.1| radical SAM protein, TIGR01212 family [Enterococcus faecalis PC1.1]
 gi|300850767|gb|EFK78516.1| radical SAM protein, TIGR01212 family [Enterococcus faecalis TUSoD
           Ef11]
 gi|306496113|gb|EFM65694.1| radical SAM protein family [Enterococcus faecalis TX0411]
 gi|306499526|gb|EFM68897.1| radical SAM protein family [Enterococcus faecalis TX0109]
 gi|306503248|gb|EFM72501.1| radical SAM protein family [Enterococcus faecalis TX0860]
 gi|306507080|gb|EFM76221.1| radical SAM protein family [Enterococcus faecalis TX2134]
 gi|306513514|gb|EFM82129.1| radical SAM protein family [Enterococcus faecalis TX4248]
 gi|311291277|gb|EFQ69833.1| radical SAM protein family [Enterococcus faecalis TX0470]
 gi|315027552|gb|EFT39484.1| radical SAM protein family [Enterococcus faecalis TX2137]
 gi|315029895|gb|EFT41827.1| radical SAM protein family [Enterococcus faecalis TX4000]
 gi|315031263|gb|EFT43195.1| radical SAM protein family [Enterococcus faecalis TX0017]
 gi|315035315|gb|EFT47247.1| radical SAM protein family [Enterococcus faecalis TX0027]
 gi|315145296|gb|EFT89312.1| radical SAM protein family [Enterococcus faecalis TX2141]
 gi|315151635|gb|EFT95651.1| radical SAM protein family [Enterococcus faecalis TX0012]
 gi|315164613|gb|EFU08630.1| radical SAM protein family [Enterococcus faecalis TX1302]
 gi|315170872|gb|EFU14889.1| radical SAM protein family [Enterococcus faecalis TX1342]
 gi|315573417|gb|EFU85608.1| radical SAM protein family [Enterococcus faecalis TX0309B]
 gi|315578130|gb|EFU90321.1| radical SAM protein family [Enterococcus faecalis TX0630]
 gi|315581335|gb|EFU93526.1| radical SAM protein family [Enterococcus faecalis TX0309A]
 gi|323479987|gb|ADX79426.1| radical SAM superfamily protein [Enterococcus faecalis 62]
 gi|329577651|gb|EGG59081.1| radical SAM protein family [Enterococcus faecalis TX1467]
          Length = 322

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|49484007|ref|YP_041231.1| hypothetical protein SAR1845 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425873|ref|ZP_05602297.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428540|ref|ZP_05604938.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431174|ref|ZP_05607551.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433855|ref|ZP_05610213.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436772|ref|ZP_05612816.1| radical SAM protein [Staphylococcus aureus subsp. aureus M876]
 gi|282904335|ref|ZP_06312223.1| radical SAM protein, family [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906160|ref|ZP_06314015.1| radical SAM protein [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909077|ref|ZP_06316895.1| radical SAM superfamily enzyme [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911385|ref|ZP_06319187.1| radical SAM superfamily enzyme [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914554|ref|ZP_06322340.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
 gi|282917020|ref|ZP_06324778.1| radical SAM protein [Staphylococcus aureus subsp. aureus D139]
 gi|282919522|ref|ZP_06327257.1| radical SAM protein [Staphylococcus aureus subsp. aureus C427]
 gi|282924900|ref|ZP_06332566.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus C101]
 gi|283770838|ref|ZP_06343730.1| radical SAM superfamily enzyme [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958513|ref|ZP_06375964.1| radical SAM family protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503632|ref|ZP_06667479.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293510648|ref|ZP_06669353.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus M809]
 gi|293537189|ref|ZP_06671869.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428336|ref|ZP_06820965.1| radical SAM protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590700|ref|ZP_06949338.1| radical SAM protein [Staphylococcus aureus subsp. aureus MN8]
 gi|49242136|emb|CAG40836.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271567|gb|EEV03713.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257275381|gb|EEV06868.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278122|gb|EEV08770.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281948|gb|EEV12085.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284123|gb|EEV14246.1| radical SAM protein [Staphylococcus aureus subsp. aureus M876]
 gi|282313266|gb|EFB43662.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317332|gb|EFB47706.1| radical SAM protein [Staphylococcus aureus subsp. aureus C427]
 gi|282319507|gb|EFB49859.1| radical SAM protein [Staphylococcus aureus subsp. aureus D139]
 gi|282321735|gb|EFB52060.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
 gi|282325080|gb|EFB55390.1| radical SAM superfamily enzyme [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327341|gb|EFB57636.1| radical SAM superfamily enzyme [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331452|gb|EFB60966.1| radical SAM protein [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595953|gb|EFC00917.1| radical SAM protein, family [Staphylococcus aureus subsp. aureus
           C160]
 gi|283460985|gb|EFC08075.1| radical SAM superfamily enzyme [Staphylococcus aureus subsp. aureus
           H19]
 gi|283471026|emb|CAQ50237.1| radical SAM protein, family [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790662|gb|EFC29479.1| radical SAM family protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920034|gb|EFD97102.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095298|gb|EFE25563.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291466539|gb|EFF09060.1| TIGR01212 family radical SAM protein [Staphylococcus aureus subsp.
           aureus M809]
 gi|295127736|gb|EFG57373.1| radical SAM protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575586|gb|EFH94302.1| radical SAM protein [Staphylococcus aureus subsp. aureus MN8]
 gi|312437782|gb|ADQ76853.1| radical SAM protein [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195674|gb|EFU26061.1| hypothetical protein CGSSa00_08415 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 317

 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +    + +    + + K   V   V ++I   P  +  +  +            + LG
Sbjct: 99  TNTHAPVEVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTIHQSTSDLINRAHDMQTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L + KGT   K +  G L   ++  
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEE 250


>gi|300024819|ref|YP_003757430.1| MiaB-like tRNA modifying enzyme [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526640|gb|ADJ25109.1| MiaB-like tRNA modifying enzyme [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 419

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F     R  V     +      +           +    +G   P +  
Sbjct: 144 CDHRCTFCIIPFGRGPSR-SVPAGEVVTQVRRLVANGYAEIVLTGVDITSYGRDLPGVAT 202

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLGVQSL 140
              +   +L  +     +  +    +EA+   +    E           +  + L +Q+ 
Sbjct: 203 LGKLVRQVLKHVPDLARLRLSSIDQVEADEDLMIALGEEERL-------MPHLHLSMQAG 255

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++ +L+ + R H+ ++AI     AR + P + F  DLI   P +T   +E  L+      
Sbjct: 256 DDMTLKRMKRRHSRADAIMFCERARTLRPDVVFGADLIAGFPTETDAMFENSLKIVDECG 315

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + +L ++  +  +GT   +M +
Sbjct: 316 LTYLHVFPFSPRRGTPAARMPQ 337


>gi|148251670|ref|YP_001236255.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bradyrhizobium
           sp. BTAi1]
 gi|229890449|sp|A5E855|MIAB_BRASB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146403843|gb|ABQ32349.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bradyrhizobium sp. BTAi1]
          Length = 466

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 74/215 (34%), Gaps = 16/215 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E+  + +  G R I+ I      + G  P 
Sbjct: 166 CDKFCTFC---VVPYTRGSEMSRPVARILDEVTRLTE-NGVREITLIGQNVNAYHGEAPD 221

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L GIA+   V+     T  ++P+ V+ +    +R     +  + L VQS 
Sbjct: 222 G-STWTLGRLLYGIAEIPGVARIRYST--SHPNDVDDSLIAAHRDLASVMPFVHLPVQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H AS+    +   R   P +  S D I   P +T   +   L       
Sbjct: 279 SDRILGLMNRKHGASDYRKVVDRFRAARPDIAFSSDFIVGFPGETEEDFRATLALIAQIG 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                 ++ +   GT    M +        E +  
Sbjct: 339 YAAAYSFKYSPRPGTPAADMQEMVSATEMDERLER 373


>gi|86747486|ref|YP_483982.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris HaA2]
 gi|86570514|gb|ABD05071.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris HaA2]
          Length = 422

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + + +++ + +      + +      +G   P  
Sbjct: 153 CDHRCTFC---IIPYGRGNSRSVPVGAVVDQVRALAERGHAEIVLTGVDLTSYGADLP-- 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
                +  ++  + ++      + I+   +    + +        +  +  + L +Q+ +
Sbjct: 208 -GTPKLGTLVKKVLRHVPELRRLRIS-SIDSIEADRDLLDALASEERLMPHLHLSLQAGD 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   +AI      R + P +    DLI   P +T   ++  L       +
Sbjct: 266 DLILKRMKRRHARQDAIDFCDEVRRLRPDIALGADLIAGFPTETDAMFQRSLDLVAECGL 325

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   +M +
Sbjct: 326 TFLHVFPYSKRPGTPAARMPQ 346


>gi|325959667|ref|YP_004291133.1| RNA modification enzyme, MiaB family [Methanobacterium sp. AL-21]
 gi|325331099|gb|ADZ10161.1| RNA modification enzyme, MiaB family [Methanobacterium sp. AL-21]
          Length = 425

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 77/238 (32%), Gaps = 20/238 (8%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFG 77
           +H       C   C YC      R         IQS+ +E ++   +         I   
Sbjct: 139 IHIIQICEGCDGFCTYC-CTRFARGR-------IQSYSSEMIKKEAEQAVTEGCKEIQLT 190

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAGV-NR 132
               +         + D I+    +    ++ +   +P S+        + ++K      
Sbjct: 191 AQDTAAYGRDTGESLADLISMISDIDGKFKLRVGMMHPKSIMNQVDPIIKAFKKGKCYKF 250

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +QS  +  L  + R H   E    +   R   P +S   D+I   P +T   ++  
Sbjct: 251 LHLPIQSGSDTVLHDMNRCHTVDEYKTIVSRFREEIPDISISTDIIVGYPTETDDDFKAT 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           L        D L + +     GT   ++ +     +   + A++   +  ++     +
Sbjct: 311 LNLIKELEPDFLHISKYMHRPGTTSSQLEEIEHETMKERSKALNDLKMEIAMKKNSMM 368


>gi|312904995|ref|ZP_07764130.1| radical SAM protein family [Enterococcus faecalis TX0635]
 gi|310631691|gb|EFQ14974.1| radical SAM protein family [Enterococcus faecalis TX0635]
          Length = 322

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|94985469|ref|YP_604833.1| tRNA-i(6)A37 modification enzyme MiaB [Deinococcus geothermalis DSM
           11300]
 gi|123381901|sp|Q1IYM0|MIAB_DEIGD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|94555750|gb|ABF45664.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Deinococcus geothermalis
           DSM 11300]
          Length = 459

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 27/205 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-----------TGPRSISSIFF 76
           C   C YC                    L E+  +                   +     
Sbjct: 148 CDHHCTYC---IVPTTRGPQVSRHPDDILRELDLLLAAGVQEVTLLGQNVNAYGVDQGAR 204

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
             G PS      + L+     +    ++       ++P +   +      +       + 
Sbjct: 205 LAGYPSF--ANLLRLVGRSGIRRVKFTT-------SHPMNFTEDVAAAMAETPAVCEYVH 255

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L VQS   + LR + R +   + ++ I   R   P +    D+I   P +T   ++  L 
Sbjct: 256 LPVQSGSNRVLRRMAREYTREKYLSHIAEIRRHLPDVVLATDIIVGFPGETEEDFQETLS 315

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
                  D   ++  +   GT  YK
Sbjct: 316 LYDEVGYDAAYMFIYSARPGTPSYK 340


>gi|229118244|ref|ZP_04247601.1| hypothetical protein bcere0017_45130 [Bacillus cereus Rock1-3]
 gi|228665216|gb|EEL20701.1| hypothetical protein bcere0017_45130 [Bacillus cereus Rock1-3]
          Length = 319

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHAKWKDGKCIAYFQAYTNT---HAPLEVL 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +      T    V ++I   P  +  +         K     + LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLTEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +A ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVAGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|330902117|gb|EGH33396.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 294

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 68/219 (31%), Gaps = 8/219 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +     F       +          ++      G   +     
Sbjct: 9   CSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNGYRGTT-HDG 65

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +A + D I     V     I     +P     +  Q + +    V  + L VQS  ++ 
Sbjct: 66  RVADLADLIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRI 125

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + RNH   E  + +    A      +S D I   P +T   ++  ++       D  
Sbjct: 126 LAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKLIEDVGFDFS 185

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 186 FSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 224


>gi|29829021|ref|NP_823655.1| methylase of isopentenylated A37 derivatives in tRNA [Streptomyces
           avermitilis MA-4680]
 gi|81720067|sp|Q82KC4|MIAB_STRAW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|29606127|dbj|BAC70190.1| putative methylase of isopentenylated A37 derivatives in tRNA
           [Streptomyces avermitilis MA-4680]
          Length = 508

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 141 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRTGDILAEIEA 198

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 199 LVGEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGQIDGLERVRF--TSPHPRDFTDD 256

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      ++ D+I
Sbjct: 257 VIAAMAETPNVMPQLHMPMQSGSDTVLKAMRRSYRQDRYLGIIEKVRAAIPHAAITTDII 316

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  +             +Q +   GT    M
Sbjct: 317 VGFPGETEEDFEQTMHAVREARFTQAFTFQYSKRPGTPAATM 358


>gi|118581050|ref|YP_902300.1| magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Pelobacter propionicus DSM 2379]
 gi|118503760|gb|ABL00243.1| Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Pelobacter propionicus DSM 2379]
          Length = 512

 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 15/193 (7%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F     R++       ++ L E+ ++RQ  G   +        T +  
Sbjct: 196 CPSSCTFCSSPGFWMRRVRFRSP-----ENMLEEILFIRQRYG---LIYFSLRDDTFT-- 245

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              +    L+         +++    ++  +S++       ++AG   + +GV+S   + 
Sbjct: 246 --ADRRRALEFCRLLIRSRAHILWNCQSRVTSLDEELLVWMKRAGCECVQIGVESGSPRI 303

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  LG+    ++  AA    + +   +S  LI ++P +T    +  +        D   +
Sbjct: 304 LSLLGKQITPAQVEAAAAAVKKVGISLSVYLISSIPGETDDDLDASIALMKRIRPDDGYV 363

Query: 205 YQLTIEKGTLFYK 217
             L    GT  ++
Sbjct: 364 SPLAYFPGTRLFQ 376


>gi|330506789|ref|YP_004383217.1| hypothetical protein MCON_0563 [Methanosaeta concilii GP-6]
 gi|328927597|gb|AEB67399.1| conserved hypothetical protein [Methanosaeta concilii GP-6]
          Length = 437

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 75/201 (37%), Gaps = 18/201 (8%)

Query: 32  CPYCDFNSHVRRYKV-----GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C YC     V + +        E+ + +     Q         +  +  FG    S    
Sbjct: 163 CSYC----IVSKARGRLKSRPVEDVVLAVERLAQLGTAEIQISAQDTAAFGSDIGS---- 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF-QGYRKAGVNR-ISLGVQSLEEQS 144
            ++A +L+ + +           +  + + +  N   + ++   + R + + VQS  ++ 
Sbjct: 215 -DLAGLLETLTEIPGDFMLRVGMMNPDSARLIQNRLIEAFQSPKIYRFLHIPVQSGSDEI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR + + E    +   R  +P +S   D+I   P +T   +E  +        D +
Sbjct: 274 LQRMGRVYTSDEFFELVSAFRFAYPDISIITDIIVGFPGETDKDFEESMSLIERLQPDKV 333

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
           ++ + +   GT    ++   D
Sbjct: 334 NITRFSPRPGTSAASLYDMPD 354


>gi|323343556|ref|ZP_08083783.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oralis ATCC
           33269]
 gi|323095375|gb|EFZ37949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oralis ATCC
           33269]
          Length = 434

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 15/196 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     +  Y  G+E       + ++ +  L           G    S     
Sbjct: 155 CDNFCHYC-----IVPYTRGRERSRD-IESILREVIDLRDKHYKEVTLLGQNVNSYRFGD 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +L    +   V  ++ +     +P  +                 I L VQS   +
Sbjct: 209 IGFPQLL---RRVAEVVPDMRVRFTTSHPKDMSDETLHVIADMPNVCKHIHLPVQSGSNK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   R I P   +S D+      +T       L        D 
Sbjct: 266 VLKLMNRKYTREWYMDRVQAIRRIVPDCGLSTDIFVGYHGETEEDHRQSLSLMKEVGYDS 325

Query: 202 LSLYQLTIEKGTLFYK 217
             +++ +   GT   K
Sbjct: 326 AFMFKYSERPGTYASK 341


>gi|317152424|ref|YP_004120472.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942675|gb|ADU61726.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 667

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 60/191 (31%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV KC +C   S     K    + I      ++          ++ +F+    P+  E +
Sbjct: 206 CVGKCGFCS-PSIGGFRKREIADLIDEIRFLIREY-DFDKLCFLNEMFY----PTAREVR 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                   +         V++ I+A    ++       ++AG   +S G++S  +  L  
Sbjct: 260 EFCAAYAALETRKP--WFVQVRIDA---GLDAETLVMMKEAGCIAVSAGIESGSDDVLAA 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +   A +        +      +   I     +T       +   +   +       L
Sbjct: 315 MNKKTTAEQIRTFFRNCKAAGMPSNGTFIIGYDGETAEDLRKTIDLLIEEDISSGDAL-L 373

Query: 208 TIEKGTLFYKM 218
              +GT  Y+ 
Sbjct: 374 VAYQGTKVYRK 384


>gi|256959923|ref|ZP_05564094.1| radical SAM superfamily enzyme [Enterococcus faecalis Merz96]
 gi|293385210|ref|ZP_06631027.1| radical SAM protein [Enterococcus faecalis R712]
 gi|293388324|ref|ZP_06632837.1| radical SAM protein [Enterococcus faecalis S613]
 gi|312907133|ref|ZP_07766125.1| radical SAM protein family [Enterococcus faecalis DAPTO 512]
 gi|312979288|ref|ZP_07790987.1| radical SAM protein, TIGR01212 family [Enterococcus faecalis DAPTO
           516]
 gi|256950419|gb|EEU67051.1| radical SAM superfamily enzyme [Enterococcus faecalis Merz96]
 gi|291077507|gb|EFE14871.1| radical SAM protein [Enterococcus faecalis R712]
 gi|291082292|gb|EFE19255.1| radical SAM protein [Enterococcus faecalis S613]
 gi|310626844|gb|EFQ10127.1| radical SAM protein family [Enterococcus faecalis DAPTO 512]
 gi|311287946|gb|EFQ66502.1| radical SAM protein, TIGR01212 family [Enterococcus faecalis DAPTO
           516]
 gi|315174704|gb|EFU18721.1| radical SAM protein family [Enterococcus faecalis TX1346]
          Length = 322

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 10/203 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            +   T   + + +G L L S+ 
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKE 251


>gi|229548737|ref|ZP_04437462.1| radical SAM superfamily protein [Enterococcus faecalis ATCC 29200]
 gi|257421047|ref|ZP_05598037.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|312951835|ref|ZP_07770725.1| radical SAM protein family [Enterococcus faecalis TX0102]
 gi|229306130|gb|EEN72126.1| radical SAM superfamily protein [Enterococcus faecalis ATCC 29200]
 gi|257162871|gb|EEU92831.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|310630186|gb|EFQ13469.1| radical SAM protein family [Enterococcus faecalis TX0102]
 gi|315148159|gb|EFT92175.1| radical SAM protein family [Enterococcus faecalis TX4244]
 gi|315153166|gb|EFT97182.1| radical SAM protein family [Enterococcus faecalis TX0031]
 gi|315154867|gb|EFT98883.1| radical SAM protein family [Enterococcus faecalis TX0043]
          Length = 322

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 10/204 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            +     F  E+Q M Q         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +            +     + LG+Q+  E++   +
Sbjct: 112 RFEQVVNEKGV---VGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQL 207
            R H+    +  +   R    R+   LI  LP +T       ++R +    +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV 231
            +   T   + + +G L L S+  
Sbjct: 229 HLMTNTKMMRDYNEGRLQLMSKEA 252


>gi|154501155|ref|ZP_02039193.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC
           29799]
 gi|150269847|gb|EDM97382.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC
           29799]
          Length = 434

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 66/203 (32%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C YC               + +  +  +     +   + ++   +     + IE  
Sbjct: 157 CVNFCTYC------------IIPYARGPVRSLALSAAVEQAKKLAQDGYREIVLTGIEIS 204

Query: 88  NIALILDGIAKNWTVSSNVEITI--------EANPSSVEVNNFQGYRKAG--VNRISLGV 137
           +             +   +   +           P ++  +  +             L +
Sbjct: 205 SWGHEFKDGTSLIDLVEGICHAVPDLRVRLGSLEPRTITEDFCRRAAALPNLCPHFHLSM 264

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L+ + R ++ ++   ++ L R  F R  ++ DLI   P ++  ++   L+   
Sbjct: 265 QSGCDAVLKRMNRKYDTAQYYESVTLLRGFFDRPAITTDLIVGFPGESEEEFTSTLEFVE 324

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
             A   + ++  +   GT   KM
Sbjct: 325 KCAFSSMHIFPYSRRTGTPAAKM 347


>gi|332981300|ref|YP_004462741.1| MiaB family RNA modification protein [Mahella australiensis 50-1
           BON]
 gi|332698978|gb|AEE95919.1| RNA modification enzyme, MiaB family [Mahella australiensis 50-1
           BON]
          Length = 443

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 79/230 (34%), Gaps = 15/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  ++    +  + +L+       +  G    S  +  
Sbjct: 153 CDRYCTYC----IIPYARGPVRS--RAPQDIVDEVSRLSQSGFKEIVLTGIHVASYGKDI 206

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D I     +S    I +    P  ++ +     ++         + +QS  +  
Sbjct: 207 GGIGLIDIIEMVHGISGIERIRLSSVEPMLLDNDFITRIKELPKVCPHFHISLQSGCDTV 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR +GR +  +     ++  R   P ++   D+I   P +T  ++E  L      A   +
Sbjct: 267 LRRMGRCYTTAVYKDIVNRLRKAIPDVAITTDVIVGFPGETDGEFEQTLAFVKEIAFSQV 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI-TSAHGLHAY 251
            ++  +  +GT   K+    D V P          L  +       + +Y
Sbjct: 327 HVFPYSPREGTPAAKL---KDQVPPHIKEQRSHMMLQMARELKMSFMRSY 373


>gi|219123728|ref|XP_002182171.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406132|gb|EEC46072.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 453

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 10/232 (4%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTP 81
           +H   C + C YC          + Q   +++ L   +   R+     ++          
Sbjct: 160 IH--GCNEHCTYC---VVPGTRGMEQSRTMEAILQEIIDLGRRGYKEVTLLGQNIDAYGR 214

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            ++  +  A +L  +             + ++P                      +  Q+
Sbjct: 215 DMVPKRTFADLLTFLNFRIPQDDMRIRYVTSHPRYFSDRVIDAVANLDKVCECFHMPFQA 274

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
            +++ LR + R +     +  I   R+  P   +  D+I   P +T   +E  LQ     
Sbjct: 275 GDDEVLRRMRRGYTYDSYMRIIRKIRDKAPDAAICGDVIVGFPGETDEGFEKTLQLMEEV 334

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             D+L+ +  +    T            + +E +        +        +
Sbjct: 335 HFDNLNTFAYSPRPNTEAATWDDQVPDSVKAERLQRVQTLAAEHGLERSMRY 386


>gi|148262598|ref|YP_001229304.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146396098|gb|ABQ24731.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 501

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 87/262 (33%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC +C     +   +  +     +F+ E++    L     +         P+  + +
Sbjct: 205 CQQKCSFCS--QQLFWAQTWRARSADNFVAELEM---LNKTYGVEVAMLADEIPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +    YR+ GV  I +GV++  +++L
Sbjct: 259 RWVRILDLMIERQV---PVKLLMETRVDDILRDADIMDKYRQGGVEHIYVGVEAGSQETL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               ++    ++  AI +  N         +  +P+ T       ++ A  Y  D     
Sbjct: 316 DLFKKDTKVEQSKQAIDIINNADIVSETSFVLGMPEDTPESIAATIELAKHYNPDMAFFL 375

Query: 206 QLTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y           ++  +LV P            +          Y    H
Sbjct: 376 AIAPWPYAELYPQLEKYVATKDYRKYNLVEPVIKPIHMTVEDLERELGKAAQKFY---MH 432

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
            F   ++L  L  W+    + +
Sbjct: 433 KF---QNLDKLTPWKREFMLAV 451


>gi|332160874|ref|YP_004297451.1| putative tRNA-thiotransferase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665104|gb|ADZ41748.1| putative tRNA-thiotransferase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861444|emb|CBX71668.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Yersinia
           enterocolitica W22703]
          Length = 474

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 69/224 (30%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGA-TY-- 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    D +     +     +     +P     +    YR     V+ + L VQS  +
Sbjct: 212 DGDICSFADLLRLVAAIDGIDRVRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D
Sbjct: 272 RILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTMKLVADVRFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               +  +   GT    +  D       + + +    +TQ    
Sbjct: 332 TSYSFIYSPRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 375


>gi|229047455|ref|ZP_04193047.1| hypothetical protein bcere0027_34400 [Bacillus cereus AH676]
 gi|228723899|gb|EEL75252.1| hypothetical protein bcere0027_34400 [Bacillus cereus AH676]
          Length = 509

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   +    +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDPLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|330887928|gb|EGH20589.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 442

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEVIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I    +P      +  Q + +    V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRVVAAVDGIDRIRYTTSPPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDVGFDFSFSFVYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|313886412|ref|ZP_07820132.1| iron-only hydrogenase maturation rSAM protein HydE [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924128|gb|EFR34917.1| iron-only hydrogenase maturation rSAM protein HydE [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 349

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 23/195 (11%)

Query: 28  CVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC   S   HV RY++  +  + +     +            +    GG     
Sbjct: 65  CCNDCYYCGIRSSNEHVTRYRLTADEVMSACARGYEI--------GFRTFVLQGGEDLYW 116

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  ++  I  ++      E  I  +   +E   ++   +AG NR  L  ++  ++ 
Sbjct: 117 RGERLLSLVRSIRSSYP-----ECAITLSLGEMECEEYEALYRAGANRYLLRHETYNQEH 171

Query: 145 LRFLGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +   R H ++ A    + A+   + I  ++   ++   P QT      +L        +
Sbjct: 172 YQ---RLHPSTMAQEHRLQALRDLKQIGYQVGTGIMVGSPGQTTAHLAQDLDFIRQLQPE 228

Query: 201 HLSLYQLTIEKGTLF 215
            + +      + T  
Sbjct: 229 MIGVGPFIPHEDTPL 243


>gi|302335758|ref|YP_003800965.1| RNA modification enzyme, MiaB family [Olsenella uli DSM 7084]
 gi|301319598|gb|ADK68085.1| RNA modification enzyme, MiaB family [Olsenella uli DSM 7084]
          Length = 422

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 17/204 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC     V + +    +      + +    +    +      I+   F G    
Sbjct: 145 CDNRCTYC----IVWKARGAARSMGSGEVVSAVRDALSRGAREVVLTGINLGSFRGTCAG 200

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQS 139
                 +  +L+ + +  TV      +IE  P  V+                 + + +QS
Sbjct: 201 G-GRIALPGLLELVLRETTVERVRLSSIE--PPDVDGELLSVMAANPARIAPFLHVCLQS 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             + +LR +GR ++ +    AI  AR +     +  DLI   P +T   +E  L      
Sbjct: 258 GCDATLRRMGRVYDTALYRTAIARAREMVPGIAVGCDLIVGFPGETDDDFERSLAFCAEM 317

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKD 221
               + +++ +   GT        
Sbjct: 318 DFAKMHVFRYSRRPGTPAASAPDQ 341


>gi|254519550|ref|ZP_05131606.1| biotin synthase [Clostridium sp. 7_2_43FAA]
 gi|226913299|gb|EEH98500.1| biotin synthase [Clostridium sp. 7_2_43FAA]
          Length = 375

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC K C YC     +RR     + +  +    M+ +  +       +    GG       
Sbjct: 63  FCKKDCIYCG----IRRSNKDADRYRLTMEDIMECV-DIGDRLGYKTYVLQGGEDDYFTD 117

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  I+  I   +    N  IT+     S +   ++   +AG +R  L  ++  ++   
Sbjct: 118 ERMVEIIKMIKSKY---PNNAITLSLGERSYDS--YKKMYEAGADRYLLRHETATKELYE 172

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L    +  E    +   + I  ++    +  LPKQT      +L            +  
Sbjct: 173 KLHPGASFEERRQCLRNLKEIGYQIGAGFMVELPKQTNKDLVNDLLFVKELEPHMCGIGP 232

Query: 207 LTIEKGTLFYK 217
               K T    
Sbjct: 233 FIPHKDTPLKN 243


>gi|167643994|ref|YP_001681657.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
           sp. K31]
 gi|229890472|sp|B0T155|MIAB_CAUSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|167346424|gb|ABZ69159.1| RNA modification enzyme, MiaB family [Caulobacter sp. K31]
          Length = 450

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 23/206 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C +C     V   + G+ +     + +        G R ++ +      + GGG  
Sbjct: 165 CDKFCTFC----VVPYTRGGEWSRPPEQIEDEARRLADQGVREVTLLGQNVNAYDGGGYT 220

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +A ++  +AK   +      T  ++P  +  +  + + +    +  + L VQ+
Sbjct: 221 -------LARLVRRLAKIPGLDRIRYTT--SHPRDMGDDLIEAHGELPELMPYLHLPVQA 271

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   I  I   R   P ++   D I   P +    +E  L      
Sbjct: 272 GSDKILKAMNRDHTAESYIRLIEKIRQARPDIAMSGDFIVGFPGERDGDFEKTLDLVREV 331

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  ++ +   GT    M    D
Sbjct: 332 GFASAFSFKYSRRPGTPASAMPGQVD 357


>gi|119383150|ref|YP_914206.1| MiaB-like tRNA modifying enzyme [Paracoccus denitrificans PD1222]
 gi|119372917|gb|ABL68510.1| MiaB-like tRNA modifying enzyme [Paracoccus denitrificans PD1222]
          Length = 420

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 83/233 (35%), Gaps = 21/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C     +  Y  G    + +   + +++ +R     R  + +   G   +   
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLR----DRGFNEVVLTGVDLTSWG 200

Query: 86  PQN--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLGVQS 139
                   + D + +   +  ++     ++  S+E +       A   R+     L +Q+
Sbjct: 201 ADLPGQPRLGDLVMRILRLVPDLPRLRISSIDSIEADENLMLAIATEPRLMPHLHLSLQA 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   +AI     AR + P +    D+I   P +T   +E  L+     
Sbjct: 261 GDDMILKRMKRRHLRDDAIRFCEEARRLRPGIAFGADIIAGFPTETEAMFENSLKLVEDC 320

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +  L ++  +  KGT   +M +        +  A  L     +  + H    
Sbjct: 321 GLTFLHVFPYSARKGTPAARMPRV--PGPAIKERAARLRAAGDAALARHLQAQ 371


>gi|46203304|ref|ZP_00208896.1| COG0621: 2-methylthioadenine synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 322

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              + + + E + + +  G R I+ I      + G  P 
Sbjct: 33  CDK---FCAFCVVPYTRGAEVSRSVAAVVEEARRLVE-GGVREITLIGQNVNAYHGEGPD 88

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P  +  ++D ++    ++     T  ++P+    +  + +      +  + L VQS 
Sbjct: 89  G-APSTLGRLMDALSAVPGLARLRYTT--SHPNDFADDLIRAHATNPLVMPYLHLPVQSG 145

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H   +    I   R   P +  S D I   P +T   +   ++      
Sbjct: 146 ADRILQAMNRRHTGDDYRRLIARIREARPDIALSSDFIVGFPGETDADFADTMRLVSETG 205

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
                 ++ +   GT   + 
Sbjct: 206 FAAAFSFKYSPRAGTPAAER 225


>gi|332799528|ref|YP_004461027.1| Radical SAM domain-containing protein [Tepidanaerobacter sp. Re1]
 gi|332697263|gb|AEE91720.1| Radical SAM domain protein [Tepidanaerobacter sp. Re1]
          Length = 562

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 24/224 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC +C     +HVR      E      L   Q      G + +  +           
Sbjct: 181 CPFKCAFCISSLETHVRT--ADLEKVKNDLLKFTQM-----GVKVVKLVDRSFNC----- 228

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
             N+   LD +        N     E NP  V     +    +G+ +     +G+QS   
Sbjct: 229 --NLDRALDLLDIIRQFPGNTVFHCEINPELVNDRFIKAL--SGIEKQLQFEVGIQSTNP 284

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++L+ + R  N    I  I L +    ++  DLI  LP ++  ++        +     +
Sbjct: 285 ETLKEISRTPNVKRTIEGIKLLKTTGIKLHVDLIAGLPHESFERFGYSFDEVYNLHPAEI 344

Query: 203 SLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSIT 243
            L  L + KGT   K    +       P   +  +     Q + 
Sbjct: 345 QLGFLKLLKGTGLRKYAHKYGIVYRTRPPYEILYNNDISYQELC 388


>gi|281421531|ref|ZP_06252530.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella copri DSM
           18205]
 gi|281404603|gb|EFB35283.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella copri DSM
           18205]
          Length = 444

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 62/203 (30%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     +  Y  G+E    +  + ++ +R L           G    S  + P
Sbjct: 155 CNNFCHYC-----IVPYTRGRERSRDA-ESILREVRDLQQRGFKEVTLLGQNVNSYGLSP 208

Query: 87  QN--------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                      A +L  +A+          T  +NP  +  +      +       I   
Sbjct: 209 SGKREEGSLSFAELLHMVAQAVPDMRVRFTT--SNPEDMTEDILHAIAEEPNLCKHIHFP 266

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
            QS   + L+ + R +   E +  I   + I P      D+      +T    +  L   
Sbjct: 267 AQSGSNKILKLMNRKYTREEYLQRIADIKRIIPGCGITTDIFVGYHDETEEDHQETLSLV 326

Query: 195 LSYAVDHLSLYQLTIEKGTLFYK 217
                D   +++ +   GT   K
Sbjct: 327 KEVGFDSAFMFKYSERPGTYAAK 349


>gi|225028999|ref|ZP_03718191.1| hypothetical protein EUBHAL_03291 [Eubacterium hallii DSM 3353]
 gi|224953697|gb|EEG34906.1| hypothetical protein EUBHAL_03291 [Eubacterium hallii DSM 3353]
          Length = 306

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 52/150 (34%), Gaps = 3/150 (2%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +     +  T    V ++I   P  +         +    +   I +G+Q+  + + 
Sbjct: 95  VDRLRALYEEAITAPEIVALSIGTRPDCITPEILDLLEELNKRKPVFIEMGLQTSHDSTA 154

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            FL R +         H       R++  +I  LP +T+      ++   +  V  + + 
Sbjct: 155 SFLNRAYPTETFTKTCHALAEAGIRVTAHIILGLPGETLDMELDTIRYLNTLPVSGIKIS 214

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L + K T+    ++     + +    ++ 
Sbjct: 215 MLYVLKNTVLASYYEQHPFHILTMEEYINH 244


>gi|126666981|ref|ZP_01737957.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter sp. ELB17]
 gi|126628697|gb|EAZ99318.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter sp. ELB17]
          Length = 448

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 83/245 (33%), Gaps = 17/245 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+   G++    +V     C K   YC F                  + E+  +     
Sbjct: 139 DNLPEPGADGPSAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPADDVIAEVAHLASQ-N 194

Query: 68  PRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNF 122
            R I     ++    G        ++  + + I    T+     I     +P        
Sbjct: 195 VREINLLGQNVNAYRGDT---HDGDVMDLAELITLIATIDGIDRIRYTTSHPVEFTDALI 251

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
             Y +    V+ + L VQS  ++ L  + R H A E  + +   R I P +SF  D I  
Sbjct: 252 DVYEQVPELVSHLHLPVQSGSDRILSAMKRGHTALEYKSKLRRLRKIRPDISFSSDFIIG 311

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T   +E  ++       D    +  +   GT    +  D ++ +  + + +    +
Sbjct: 312 FPGETEKDFEDTMKLINDIGFDMSFSFIYSARPGTPASDLPDDTEMAVKKQRLKILQDRI 371

Query: 239 TQSIT 243
            Q++ 
Sbjct: 372 NQTVM 376


>gi|317503044|ref|ZP_07961124.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
 gi|315665844|gb|EFV05431.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
          Length = 446

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I S + + +      G   + + +  G    +    
Sbjct: 164 CNYFCTYC---TIPYARGFSRNPTISSLIKQAEEAAAEGGKEIVLTGVNIGDFGET--TH 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
           +    ++  + K   +      ++E  P  ++        +  A +    + +QS  +  
Sbjct: 219 ERFIDLVKALDKVEGIKRFRISSLE--PDLIDDELIAFCAESRAFMPHFHIPLQSGSDTV 276

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++ S     I L + + P   +  D++     +    +E          +  L
Sbjct: 277 LKLMHRRYDTSLFAHKIKLIKELMPDAFIGVDVMVGCRGEKPEYFEECYNFLEQLPITQL 336

Query: 203 SLYQLTIEKGT 213
            ++  +   GT
Sbjct: 337 HVFPYSERPGT 347


>gi|291550415|emb|CBL26677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus torques
           L2-14]
          Length = 482

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ + +L     +  +  G    S    L
Sbjct: 199 CNNFCSYC-----IVPYVRGRERS-REPKAIIREIERLVADGVVEVMLLGQNVNSYGKNL 252

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP   A +L  I K   +       + ++P  +     +   K+      + L VQS  
Sbjct: 253 EEPMTFAQLLQEIEKIEGLERIRF--MTSHPKDLSDELIEVMSKSKKICKHLHLPVQSGS 310

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +A     R   P +S   D+I   P +T   ++  L        
Sbjct: 311 SRILKLMNRHYDKEQYLALAEKIRKAVPDLSLTTDIIVGFPGETEEDFQETLDVVRKVRY 370

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 371 DSAFTFIYSKRTGTPAAVM 389


>gi|295681473|ref|YP_003610047.1| radical SAM protein [Burkholderia sp. CCGE1002]
 gi|295441368|gb|ADG20536.1| Radical SAM domain protein [Burkholderia sp. CCGE1002]
          Length = 510

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 11/200 (5%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC       R  ++ + + + + +  ++         + S        P  +  
Sbjct: 203 CNRSCIYCVEPLIKGRSVRMREPDDVVAEMASLEERGVNVFHINDSEFNLSVAHPMALCA 262

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             I            ++  ++      P           + AG   ++ GV +  E  L+
Sbjct: 263 AII---------RHGLAGKIQWYAYGMPRPFPDELAAAMKAAGCVGMNFGVDTASETMLK 313

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY- 205
            L R   A +   A++ A+        +L++  P +T       ++       + +S+  
Sbjct: 314 ILRRTFGAPDIEHAVNTAKRHGLEHIIELLFGAPGETQETARETIEFIKRVDPERVSVTV 373

Query: 206 QLTIEKGTLFYKMHKDGDLV 225
            L I  GT   +M +   L 
Sbjct: 374 GLRIFPGTELEQMIRREGLH 393


>gi|228469810|ref|ZP_04054768.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228308649|gb|EEK17400.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 449

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +      V +   I S + + + + +L G R I       G       +
Sbjct: 171 CNYYCTYC---TIPAARGVSRNGSIASLVAQAERVAEL-GGREIILTGVNIGDFGRSTGE 226

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
            +  +L  + +   ++     +IE  P  +     Q   +    +    + +QS  +  L
Sbjct: 227 TLLELLHRLTQVAGIARYRIGSIE--PELLTPEIIQFVAETAQFMPHFHIPLQSGSDHVL 284

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R+++       + L   + P   +  D+I  +  +        L    +     L 
Sbjct: 285 RLMRRHYDTELFAERLKLIYELIPDAFVGIDVIAGMRGELPEHHAETLAFLKTQPWSQLH 344

Query: 204 LYQLTIEKGT 213
           ++  +  KGT
Sbjct: 345 VFPYSERKGT 354


>gi|163748655|ref|ZP_02155908.1| hypothetical protein KT99_18667 [Shewanella benthica KT99]
 gi|161331765|gb|EDQ02569.1| hypothetical protein KT99_18667 [Shewanella benthica KT99]
          Length = 302

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 81/242 (33%), Gaps = 18/242 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +CD   +    K  +   +     +++ + +     S+S +F   G    +    + 
Sbjct: 38  KCSFCD--MYTAPEKRFRAQKLDKVADDIKAVAR--RGVSVSRVFLADGDAMSLPFSRLE 93

Query: 91  LILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            I   I ++   VS      +  N  +         R  G++ + +G +S +++ L+ + 
Sbjct: 94  EICLLIREHLPQVSRISSYCLPRNLKNKSPEQLLRLRALGLSLLYIGCESGDDEVLKRIE 153

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQL 207
           +    + ++ A+H  +    + S  ++  L     +        +   +   + LS   +
Sbjct: 154 KGETYASSLEALHKIKAAGIKSSVMILNGLGGVDLSHQHALNSARLMNAVQPEFLSTLVV 213

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+  GT       DG   LP +       +        +                S H  
Sbjct: 214 TLPLGTQRMDKAYDGLFQLPDQMGLFREMHTLLQNLELN-----------KTIFRSDHAS 262

Query: 268 NY 269
           NY
Sbjct: 263 NY 264


>gi|78044693|ref|YP_359280.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996808|gb|ABB15707.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 434

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC            +   ++  + E++ + Q      + + I  G       E 
Sbjct: 153 CNSYCAYC---IIPYARGPLRSRPLEDVVAEVKKLCQSGFSEIVLTGIHTGAYG---QEK 206

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           Q++  + D +A+ + +     + +    P    V        +      + L +QS ++ 
Sbjct: 207 QDLPKLADLVAELFKIPELKRLRLSSIEPQDFTVELLDVLANSPKFCRHLHLPLQSGDDD 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R + + E +  I   R   P ++   D+I   P +T  Q+              
Sbjct: 267 ILKAMRRKYTSYEYLRLIETIRERIPDIALTSDVIVGFPGETEEQFLNTYNLVKKVGFMD 326

Query: 202 LSLYQLTIEKGTLFYKMH 219
           + +++ +   GT   KM 
Sbjct: 327 IHVFKYSPRAGTPAAKMP 344


>gi|15643593|ref|NP_228639.1| hypothetical protein TM0830 [Thermotoga maritima MSB8]
 gi|14916854|sp|Q9WZT7|Y830_THEMA RecName: Full=Putative methylthiotransferase TM_0830
 gi|4981362|gb|AAD35912.1|AE001750_6 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 434

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC        R      E F + F    M+  +++     ++   +G    S +
Sbjct: 147 CDNTCTYCAIRLARGTRIRSKPLEIFKEEFAEMVMKGYKEIV-ITGVNLGKYGKDMGSSL 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +  +++ +  ++ V          N   V     + +++       + + VQS  +
Sbjct: 206 --AELLKVIEKVPGDYRVR-----LSSINVEDVNDEIVKAFKRNPRLCPHLHISVQSGSD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +  S+ +  +   R+I P  S   D+I   P +T   ++  L+        
Sbjct: 259 DVLKRMGRKYKISDFMRVVDKLRSIDPDFSITTDIIVGFPGETDADFQRTLELVEKVEFS 318

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + +++ +   GT   +M
Sbjct: 319 RVHIFRFSPRPGTPASRM 336


>gi|254495105|ref|ZP_05108029.1| tRNA-i(6)A37 modification enzyme MiaB [Polaribacter sp. MED152]
 gi|85819455|gb|EAQ40612.1| tRNA-i(6)A37 modification enzyme MiaB [Polaribacter sp. MED152]
          Length = 484

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 80/265 (30%), Gaps = 25/265 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGT- 80
           C   C +C            +    +S L E+Q M            +++ S  + GG  
Sbjct: 181 CDNMCTFC---VVPFTRGRERSRDPKSILEEIQQMVDKNYKEITLLGQNVDSFLWYGGGL 237

Query: 81  ------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  S +      + A +LD  A              +NP  + ++      K    
Sbjct: 238 KKDFKKASEMAQATAVDFAQLLDMCATQ--FPKTRFRFSTSNPQDMSLDVIHVMAKHRNI 295

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
              I L VQS     L+ + R H   E +  +     I P M+   D+I     +T    
Sbjct: 296 CKYIHLPVQSGSNAMLKAMNRQHTREEYMELVDNIFKIVPEMALSQDMIVGFCGETEQDH 355

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  L        D   ++  +   GTL  K  +D       +    ++ +L Q       
Sbjct: 356 QDTLDLMEYVKYDFGFMFAYSERPGTLAGKKMEDDVPEAVKKRRLTEVIDLQQKHALYRT 415

Query: 248 LHAYEISNHSFLGAESLHNLNYWRY 272
                      +   S  N N W+ 
Sbjct: 416 QQHLGKVEEVLIEGTSKKNPNEWKG 440


>gi|300692456|ref|YP_003753451.1| isopentenyl-adenosine A37 tRNA methylthiolase, Fe-S protein
           [Ralstonia solanacearum PSI07]
 gi|299079516|emb|CBJ52194.1| isopentenyl-adenosine A37 tRNA methylthiolase, Fe-S protein
           [Ralstonia solanacearum PSI07]
          Length = 450

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 71/203 (34%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGG-GT 80
           C K C YC       R +     F            Q  G R ++ +      + G  G 
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQ--GVREVTLLGQNVNAYIGRMGD 211

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQ 138
            S  E  + AL+L+ +A+   +      T  ++P        + Y   +  V+ + L VQ
Sbjct: 212 TS--ERADFALLLEYVAEIPGIERIRYTT--SHPKEFTSRLIEAYATNRKLVDHLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              ++ L  + R +   E  + I   R I P +S   D I   P +T   +   +     
Sbjct: 268 HGSDRILMAMKRGYTVLEYKSIIRKLRAIRPDISIATDFIVGFPGETDADFAKTMDLVHE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D+   +  +   GT    +H
Sbjct: 328 IGYDNSFSFIYSPRPGTPAANLH 350


>gi|284009227|emb|CBA76316.1| tRNA-methylthiotransferase MiaB protein [Arsenophonus nasoniae]
          Length = 476

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 79/262 (30%), Gaps = 32/262 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       YV     C K   YC F                  L E+  +
Sbjct: 135 IEKFDRLPEPRAEGP-SAYVSIMEGCNK---YCSFCVVPYTRGEEVSRPCDDVLFEIAQL 190

Query: 63  RQLTGPRSISSI----------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
               G R I  +           F GG   +     +  ++  I        +      +
Sbjct: 191 AAQ-GVREIHLLGQNVNAYRGATFDGG---ICSFAELLRLVAAIDGV-----DRIRFTTS 241

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P     +    Y      V+ + L VQS  ++ L  + R+H A E  + I   R   P 
Sbjct: 242 HPIEFSDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRSHTALEYKSIIRKLRKARPN 301

Query: 171 M--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +  S D I   P +T   ++  +Q       D    +  +   GT    +  D       
Sbjct: 302 ILISSDFIVGFPGETEDDFQKTMQLIADVNFDMSFSFIYSPRPGTPAADLPDDVS----E 357

Query: 229 ENVAVDLYNLTQSITSAHGLHA 250
           +     LY L Q I      ++
Sbjct: 358 DEKKQRLYLLQQRINQQAMNYS 379


>gi|167758331|ref|ZP_02430458.1| hypothetical protein CLOSCI_00670 [Clostridium scindens ATCC 35704]
 gi|167664228|gb|EDS08358.1| hypothetical protein CLOSCI_00670 [Clostridium scindens ATCC 35704]
          Length = 449

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K C YC       DF S      V +   +       Q +++L      ++++     
Sbjct: 162 CDKHCTYCIIPKIRGDFRSVPMERLVKEAGELAE-----QGVKELILVAQETTLYGKD-- 214

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L   +++  +L  + +   +       +   P  ++ N  Q  ++     + + L +Q
Sbjct: 215 --LYGEKSLHRLLRELCRISGIRWIR--LLYCYPEEIDENLIQIMKEEKKICHYLDLPIQ 270

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ +GR  + ++    I   R   P ++    LI   P +T  Q E  ++    
Sbjct: 271 HANDDILKRMGRRTSKNQLEEIIGRLRREIPDIALRTTLITGFPGETKEQHEELMEFVDE 330

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              D L ++  + E+ T    M          E    ++  L Q I
Sbjct: 331 MEFDRLGVFTYSPEEDTPAAGMPDQV-PEEVKEERQAEIMELQQEI 375


>gi|156740474|ref|YP_001430603.1| radical SAM domain-containing protein [Roseiflexus castenholzii DSM
           13941]
 gi|156231802|gb|ABU56585.1| Radical SAM domain protein [Roseiflexus castenholzii DSM 13941]
          Length = 576

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 10/212 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HV      +    Q  L EM  ++++     +  I F     ++ + +
Sbjct: 309 CPAGCRYC--IKHVTYQASVRHRSPQHVLEEMYMLKEMG----MHHIHFEADLFTV-KKE 361

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  + + I K+      ++ +  +    V+       +KAG   I+ G++S  E  L+ 
Sbjct: 362 FVYDLCNAIIKDGI---KLQWSCNSRVDFVDAEELALMKKAGCFMIAWGLESGSEAVLKR 418

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +          I  +R +  +     I  LP +T+   +  +  +    +D    +  
Sbjct: 419 ARKGTTVKRIEETITASRKVGIKNWGYFIIGLPGETVETIQQTIALSKRLPLDIALFHIA 478

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           T   GT FY    +   +        D+YN T
Sbjct: 479 TPYPGTPFYYEAVENGWIQMDRWEDYDMYNHT 510


>gi|23502783|ref|NP_698910.1| hypothetical protein BR1933 [Brucella suis 1330]
 gi|62290787|ref|YP_222580.1| hypothetical protein BruAb1_1909 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700698|ref|YP_415272.1| elongator protein 3 [Brucella melitensis biovar Abortus 2308]
 gi|148559183|ref|YP_001259755.1| hypothetical protein BOV_1860 [Brucella ovis ATCC 25840]
 gi|161619851|ref|YP_001593738.1| MiaB-like tRNA modifying enzyme [Brucella canis ATCC 23365]
 gi|163843956|ref|YP_001628360.1| MiaB-like tRNA modifying enzyme [Brucella suis ATCC 23445]
 gi|189025001|ref|YP_001935769.1| elongator protein 3 [Brucella abortus S19]
 gi|254690074|ref|ZP_05153328.1| elongator protein 3 [Brucella abortus bv. 6 str. 870]
 gi|254694562|ref|ZP_05156390.1| elongator protein 3 [Brucella abortus bv. 3 str. Tulya]
 gi|254696187|ref|ZP_05158015.1| elongator protein 3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700574|ref|ZP_05162402.1| elongator protein 3 [Brucella suis bv. 5 str. 513]
 gi|254704944|ref|ZP_05166772.1| elongator protein 3 [Brucella suis bv. 3 str. 686]
 gi|254707542|ref|ZP_05169370.1| elongator protein 3 [Brucella pinnipedialis M163/99/10]
 gi|254708921|ref|ZP_05170732.1| elongator protein 3 [Brucella pinnipedialis B2/94]
 gi|254731105|ref|ZP_05189683.1| elongator protein 3 [Brucella abortus bv. 4 str. 292]
 gi|256030447|ref|ZP_05444061.1| elongator protein 3 [Brucella pinnipedialis M292/94/1]
 gi|256059907|ref|ZP_05450093.1| elongator protein 3 [Brucella neotomae 5K33]
 gi|256158431|ref|ZP_05456329.1| elongator protein 3 [Brucella ceti M490/95/1]
 gi|256253851|ref|ZP_05459387.1| elongator protein 3 [Brucella ceti B1/94]
 gi|256258327|ref|ZP_05463863.1| elongator protein 3 [Brucella abortus bv. 9 str. C68]
 gi|256370335|ref|YP_003107846.1| hypothetical protein BMI_I1955 [Brucella microti CCM 4915]
 gi|260169357|ref|ZP_05756168.1| hypothetical protein BruF5_13565 [Brucella sp. F5/99]
 gi|260546051|ref|ZP_05821791.1| elongator protein 3 [Brucella abortus NCTC 8038]
 gi|260567580|ref|ZP_05838050.1| elongator protein 3 [Brucella suis bv. 4 str. 40]
 gi|260755612|ref|ZP_05867960.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260758837|ref|ZP_05871185.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760561|ref|ZP_05872904.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884638|ref|ZP_05896252.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261214886|ref|ZP_05929167.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|261220989|ref|ZP_05935270.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261315023|ref|ZP_05954220.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261316420|ref|ZP_05955617.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261323879|ref|ZP_05963076.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261751082|ref|ZP_05994791.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755644|ref|ZP_05999353.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261758875|ref|ZP_06002584.1| elongator protein 3 [Brucella sp. F5/99]
 gi|265987491|ref|ZP_06100048.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265996948|ref|ZP_06109505.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|294851175|ref|ZP_06791848.1| MiaB-like tRNA modifying enzyme [Brucella sp. NVSL 07-0026]
 gi|297247174|ref|ZP_06930892.1| MiaB-like tRNA modifying enzyme [Brucella abortus bv. 5 str. B3196]
 gi|23348804|gb|AAN30825.1| conserved hypothetical protein [Brucella suis 1330]
 gi|62196919|gb|AAX75219.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616799|emb|CAJ11889.1| Protein of unknown function UPF0004:MiaB-like tRNA modifying
           enzyme:Elongator protein 3/MiaB/NifB:Radical SAM
           [Brucella melitensis biovar Abortus 2308]
 gi|148370440|gb|ABQ60419.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|161336662|gb|ABX62967.1| MiaB-like tRNA modifying enzyme [Brucella canis ATCC 23365]
 gi|163674679|gb|ABY38790.1| MiaB-like tRNA modifying enzyme [Brucella suis ATCC 23445]
 gi|189020573|gb|ACD73295.1| elongator protein 3 [Brucella abortus S19]
 gi|256000498|gb|ACU48897.1| hypothetical protein BMI_I1955 [Brucella microti CCM 4915]
 gi|260096158|gb|EEW80034.1| elongator protein 3 [Brucella abortus NCTC 8038]
 gi|260157098|gb|EEW92178.1| elongator protein 3 [Brucella suis bv. 4 str. 40]
 gi|260669155|gb|EEX56095.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260670993|gb|EEX57814.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675720|gb|EEX62541.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874166|gb|EEX81235.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916493|gb|EEX83354.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260919573|gb|EEX86226.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261295643|gb|EEX99139.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261299859|gb|EEY03356.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261304049|gb|EEY07546.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261738859|gb|EEY26855.1| elongator protein 3 [Brucella sp. F5/99]
 gi|261740835|gb|EEY28761.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745397|gb|EEY33323.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551416|gb|EEZ07406.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264659688|gb|EEZ29949.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294819764|gb|EFG36763.1| MiaB-like tRNA modifying enzyme [Brucella sp. NVSL 07-0026]
 gi|297174343|gb|EFH33690.1| MiaB-like tRNA modifying enzyme [Brucella abortus bv. 5 str. B3196]
          Length = 427

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 77/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  + +  +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PGNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I     AR + P + F  D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|213582987|ref|ZP_03364813.1| radical SAM protein, TIGR01212 family [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 160

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 1/118 (0%)

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +++LR + R H+ +       +AR    ++   LI  LP +   +    ++R +   VD
Sbjct: 1   HDKTLRRINRGHDFACYQRTTRIARERGLKVCAHLIVGLPGEGQAECLQTMERVVETGVD 60

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            + L+ L I KG+   K  + G L     +            T    ++   IS  + 
Sbjct: 61  GIKLHPLHIVKGSTMAKAWEAGRLNGIELDDYTLTAGEMIRHTPPEVIYH-RISASAR 117


>gi|114566504|ref|YP_753658.1| 2-methylthioadenine synthetase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122318431|sp|Q0AYB7|MIAB_SYNWW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|114337439|gb|ABI68287.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 445

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 80/258 (31%), Gaps = 37/258 (14%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQL 65
             +       L  +V+  F C   C YC     +  Y  G+E        + E++ +   
Sbjct: 142 EPLPSCRKPGLSAFVNIMFGCNNFCSYC-----IVPYTRGRERSRKADDIIRELEELAA- 195

Query: 66  TGPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEV 119
            G + ++ +      +G G              D + +  +V+    I     +P  V  
Sbjct: 196 AGYKEVTLLGQNVNSYGRGL------GEKIEFADLLYRANSVAGIERIRFTTSHPKDVSD 249

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DL 175
              Q   +       I   +Q+   + L+ + RN++    +  +   R+  P +S   DL
Sbjct: 250 RLLQAIAECEKLCEHIHAPLQAGSNRILQRMNRNYSREHYLKLVERMRHYVPGVSITSDL 309

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           I   P +T   +   L        D    +  +   GT   ++ +   L           
Sbjct: 310 IVGFPGETEEDFLETLDMVERVRFDAAFTFLYSQRSGTRAAELAEQIPL----------- 358

Query: 236 YNLTQSITSAHGLHAYEI 253
               +          Y+I
Sbjct: 359 -EEKKQRLERLNRRQYQI 375


>gi|319406389|emb|CBI80030.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 427

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     V  Y  G    +   +  ++ +++L     I  I   G   +   P 
Sbjct: 150 CDHRCTFC-----VIPYGRGPSRSVPMGI-IIEQIKKLVDN-GIQEIILTGVDLTSYGPD 202

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                 +  ++  I  +      + ++   +   V+          K  +  + L +Q+ 
Sbjct: 203 LPGKTTLGKLVSTILHHVPDLPRLRLS-SIDSIEVDQELINLLTYEKRIMPHLHLSLQAG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   L+ + R H    AI       A+        DLI   P +T   ++  L       
Sbjct: 262 DNMILKRMKRRHLRENAIEFCQSLRAKRPTIVYGADLIAGFPTETEEMFQNSLNLINECG 321

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           + HL ++  +  KGT   +M +   
Sbjct: 322 LTHLHVFPFSPRKGTPAARMPQINH 346


>gi|285808445|gb|ADC35971.1| conserved hypothetical protein [uncultured bacterium 98]
          Length = 328

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC           G+ + +   L  ++          +I+ +  G     L + 
Sbjct: 40  CEEHCSYC---IIPSTRGRGRSHPLPVVLENIRRGTAAGYKEIAITGVHLGSYGRDLGDG 96

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  ++  +A+       +       P        +    +G       L +Q   +  
Sbjct: 97  TTLDALVRALAEWP--EDVLFRISSLEPMDCTREVVRLIAGSGRLAPHFHLPLQHGSDAM 154

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  +GR + A+     +    AR     +  D+I   P +T   +   L         H+
Sbjct: 155 LSAMGRPYTAAYYSDLLEVIQARLPDASIGTDIIVGFPGETDDHFARTLVAVERLPFSHV 214

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++  +   GT    +    D
Sbjct: 215 HVFPYSDRPGTAAASLPGKVD 235


>gi|218437115|ref|YP_002375444.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cyanothece sp.
           PCC 7424]
 gi|229890508|sp|B7K993|MIAB_CYAP7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|218169843|gb|ACK68576.1| RNA modification enzyme, MiaB family [Cyanothece sp. PCC 7424]
          Length = 454

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 64/198 (32%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC          V Q    Q+   EM  + Q  G + I+ +      +G   P 
Sbjct: 157 CNERCTYC---VVPNVRGVEQSRTPQAIRAEMVELGQQ-GYKEITLLGQNIDAYGRDLPG 212

Query: 83  LI-EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    ++   + D +     V     I     +P           ++         +  Q
Sbjct: 213 VTESGRHQHTLTDLLYYVNDVPGIERIRFATSHPRYFTERLIVACKELPKVCEHFHIPFQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +        I   R   P   +S D I   P +T  Q+E  L+    
Sbjct: 273 SGDNDLLKAMKRGYTHERYRQIIDKIREYMPDASISADAIVGFPGETEAQFENTLKLVED 332

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 333 IGFDQLNTAAYSPRPGTP 350


>gi|82703805|ref|YP_413371.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrosospira multiformis
           ATCC 25196]
 gi|123754233|sp|Q2Y5J2|MIAB_NITMU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|82411870|gb|ABB75979.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosospira multiformis
           ATCC 25196]
          Length = 474

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 25/200 (12%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT------------GPRSISSIFFGG 78
           C  YC F              +   LTE+  +  L               R        G
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPLDDILTEIAGLTNLGVKEVTLLGQNVNAYRGRMQYAEEG 216

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                    + AL+L+ + +   +      T  ++P        + Y+ +   V+ + L 
Sbjct: 217 EL------ADFALLLEYLHEIPGIERIRYTT--SHPREFTPRLIEAYKASPKLVSHVHLP 268

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L  + R + + E  + I   R   P +S   D I   P +T   +E  ++  
Sbjct: 269 VQSGSDRILAAMKRGYTSLEYKSIIRRLRAARPDISITSDFIVGFPGETEADFEATMKLI 328

Query: 195 LSYAVDHLSLYQLTIEKGTL 214
            +   D    +  +   GT 
Sbjct: 329 EAVNFDGSFSFIYSSRPGTP 348


>gi|303247842|ref|ZP_07334110.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302490743|gb|EFL50644.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 737

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 106/340 (31%), Gaps = 28/340 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +     G++  ++S    +  + +      I   FF   T +     
Sbjct: 217 CPSACIFC-----MTPKISGKKLRLRSPENILAELSECYFTHGIRDFFFKSDTFTF--DA 269

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                +     +  +S  +     +    +E +     +KAG   ++ G +S   ++L  
Sbjct: 270 AWTKAVCQAILDSPLSGKIRWVANSKVKPLERDTLAIMKKAGCWLVAFGYESGSPETLTR 329

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N   ++ + A   A+ +  R     +  LP +     E   +       D L L+  
Sbjct: 330 IHKNTTINDNLQATKWAKEVGLRTFGFFLIGLPWEGPEHLEATRKHIFELDNDFLELHIA 389

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
               GT         + ++P   +  D +N     T    +   EI           H  
Sbjct: 390 IPYYGTRL-NEIARQEGLIPDTVLGKDYFNAPTVGTKHLSME--EIEAFRKKTLLDFH-- 444

Query: 268 NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQA 327
                     + P    R  + +      +  +    L++++           L+++   
Sbjct: 445 ----------LRPSYIGRKILQAGGNPKILANYARFGLRLLKNTLLPPKRPRRLTADDAP 494

Query: 328 DEFLMMGLR------LREGISVKDWEMLAGRNLDIECERN 361
              L++G        L   ++ +D   L   + D+E    
Sbjct: 495 PHALILGANSDIATALARELAREDKATLTLASRDVERLER 534


>gi|296282523|ref|ZP_06860521.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Citromicrobium bathyomarinum JL354]
          Length = 541

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 63/195 (32%), Gaps = 6/195 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       ++K  ++  I+     +  + QL     +         P++   +
Sbjct: 204 CPFTCSFCS------QWKFWRDYRIRDPKDVVDEIEQLHERHGVGFFILADEEPTINRKK 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I    + I +         I         +      YRKAG+  +SLG ++  +  L  
Sbjct: 258 FIEFCQELIDRGLPAKVKWGINTRVTDIYRDRELLSFYRKAGLVHVSLGTEAAAQMKLDR 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     E   AI L R     +    I  L  +T    E   + A  +  D  +    
Sbjct: 318 FNKETKVEENKQAIRLLREADIFVEAQFIVGLDNETPETLEETYKMAWDWQPDLANWAMY 377

Query: 208 TIEKGTLFYKMHKDG 222
           T    T  ++  +D 
Sbjct: 378 TPWPFTPLFEEIRDQ 392


>gi|240144034|ref|ZP_04742635.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           L1-82]
 gi|257203960|gb|EEV02245.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           L1-82]
          Length = 496

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 77/222 (34%), Gaps = 20/222 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     ++ + +L     +  +  G    S    +
Sbjct: 215 CNNFCSYC-----IVPYVRGRERS-REPKEIIREVERLAADGVVEIMLLGQNVNSYGKNL 268

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I K   +       + ++P  +  +  +  + +      + L +QS  
Sbjct: 269 EQPMTFAQLLQEIEKVDGIERIRF--MTSHPKDLSDDLIEVMKNSKKICKHLHLPLQSGS 326

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   R   P ++   D+I   P +T   +E  +        
Sbjct: 327 SRILKLMNRRYDKEHYLELVDKIRAAVPDIALTTDIIVGFPGETEEDFEETMDVVRKVRY 386

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           D    +  +   GT    M    +  +P + +      L + 
Sbjct: 387 DSAFTFIYSKRTGTPAAVM----EDQIPEDVIKARFDRLLKE 424


>gi|223986392|ref|ZP_03636398.1| hypothetical protein HOLDEFILI_03710 [Holdemania filiformis DSM
           12042]
 gi|223961634|gb|EEF66140.1| hypothetical protein HOLDEFILI_03710 [Holdemania filiformis DSM
           12042]
          Length = 484

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 70/235 (29%), Gaps = 23/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R K    +         +   Q     ++          +     
Sbjct: 196 CDKFCTYC--IVPYTRGKERSRDPEDVLAEVRELKAQGYKEITLLGQNVNAYGKNRASGY 253

Query: 88  NIALILDGIAKNWTVSSNVEITIE------ANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             A +L             EI +E      ++P                 +  I L VQS
Sbjct: 254 GFAQLLR---------DTAEIGVERVRFTTSHPWDFTDEMIDVIASYDNIMPAIHLPVQS 304

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ +GR +   E +   H  ++  P  SF  D+I   P +T  Q+EM L      
Sbjct: 305 GSSEMLKIMGRRYTREEYLTLFHKIKDRIPGCSFTTDIIVGFPNETEEQFEMTLSLVDEC 364

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             D    +  +  +GT   +M  +    + S  +      +     +      Y 
Sbjct: 365 QYDGAFTFIYSPREGTPAARMQDNVPAEVKSRRLQQLNEKIA--FYAHRNNEPYR 417


>gi|295677633|ref|YP_003606157.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1002]
 gi|295437476|gb|ADG16646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1002]
          Length = 461

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 66/206 (32%), Gaps = 20/206 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C K C YC                +   LTE+  +          L    +     FGG 
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYRGKFGGA 213

Query: 80  TPSLIEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
             +L   +  + A +++ +A    +      T  ++P          Y K    V+ + L
Sbjct: 214 L-TLGSTEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHL 270

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQ   ++ L  + R +   E  + I    A      +S D+I   P +T   +   +  
Sbjct: 271 PVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFAKMMAL 330

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D    +  +   GT    +H
Sbjct: 331 VEEMKYDTSFSFIYSPRPGTPAANLH 356


>gi|85860140|ref|YP_462342.1| tRNA 2-methylthioadenosine synthase -like protein [Syntrophus
           aciditrophicus SB]
 gi|85723231|gb|ABC78174.1| tRNA 2-methylthioadenosine synthase -like protein [Syntrophus
           aciditrophicus SB]
          Length = 451

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 76/229 (33%), Gaps = 12/229 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ-SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC     +   +    +  + S L ++  M +      + +    G       P
Sbjct: 167 CNAWCSYC----IIPSARGRSRSLAEGSVLEQLAHMGRTGYREVVLTGIHLGAYGQDFSP 222

Query: 87  QN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQ 143
           Q+ +  +L  + +   V      +IE  P+ +  +     R+       + + +QS ++ 
Sbjct: 223 QSSLVDLLRKVEEQHPVERLRLSSIE--PTEISDDFIALLRQSALLCPHLHIPLQSGDDS 280

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R++  S     +       P   +  D+I   P +    +E  ++   S  V +
Sbjct: 281 ILTRMKRHYTTSFFKDLLEKLCRAIPDLAIGIDVIAGFPGEGEAAFERTVELIESLPVAY 340

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L ++  ++  GT    M          +   +     T+   +      
Sbjct: 341 LHVFPYSVRPGTPAAAMPDQVSPDEKKKRAEILRTLGTRKREAFARRFH 389


>gi|315608055|ref|ZP_07883048.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
 gi|315250524|gb|EFU30520.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
          Length = 450

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 6/188 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +      L G R I       G       +
Sbjct: 164 CNYFCTYC---TIPYARGFSRNPSIASLVEQ-AREAALEGGREIVLTGVNIGDFGATTHE 219

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++  + +   +      ++E +  S E+  +    +A +    + +QS  ++ L+ 
Sbjct: 220 SFLDLVKALDEVEGIERFRISSLEPDLCSDELVEYCSISRAFMPHFHIPLQSGSDEVLKL 279

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I+L +   P   +  D++     +    +E       S  V  L ++
Sbjct: 280 MHRRYDRALFAHKINLIKEKMPDAFIGVDVMVGCRGEKPEYFEDCYDFLESLPVTQLHVF 339

Query: 206 QLTIEKGT 213
             +   GT
Sbjct: 340 PYSERPGT 347


>gi|313901801|ref|ZP_07835224.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467921|gb|EFR63412.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
           subterraneus DSM 13965]
          Length = 518

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 25/232 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C            +    +  + E++++              G    S  +  
Sbjct: 212 CDKFCTFC---IVPTTRGRERSRRPEDVIAEVEYLAAEGYK---EVTLLGQNVNSYGKDL 265

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            I      +         +       ++P        +   ++        L VQS   Q
Sbjct: 266 GIGYDFADLLARLDQVPGIRWIRYTTSHPRDFSDKLIRTIAESDKVTEHFHLPVQSGSNQ 325

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR++ R +     +  I   R   P   ++ D+I   PK+T   +   L        D+
Sbjct: 326 VLRWMNRRYTREHYLRLIEKIREAVPDACITTDIIVGFPKETEEDFRQTLDLVRQVEYDN 385

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +  +  +GT   +  +                 + Q          YEI
Sbjct: 386 AFTFIYSPREGTPAARWPQLPR-------------EVKQERLERLMEVQYEI 424


>gi|313897359|ref|ZP_07830902.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2]
 gi|312957729|gb|EFR39354.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2]
          Length = 441

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 72/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPS 82
           C + C YC     +   +  + +  +  +  +      +G R I      +  +G G  S
Sbjct: 153 CNQFCSYC----IIPFARGAERSLPEDEVLAIARSLSESGHREIVLSGIHTGRYGNGINS 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
            +       ++  + K       + I+     + +     +  +  +     + + VQS 
Sbjct: 209 SL-----CQLMKRMVKEIPKLQRIRIS-SIEMNEITDELLEFIKGEEKIARHLHIPVQSA 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +  +  +  +   R++ P +S   D+I   P+++  Q++  L       
Sbjct: 263 NTTVLKNMNRPYTIAWFMERVDYIRSLIPDISISSDVITGFPQESEEQFQDTLDNIARMR 322

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           +  L ++  +    T   +M
Sbjct: 323 LSFLHVFPYSRRDHTAAAQM 342


>gi|212712962|ref|ZP_03321090.1| hypothetical protein PROVALCAL_04060 [Providencia alcalifaciens DSM
           30120]
 gi|212684440|gb|EEB43968.1| hypothetical protein PROVALCAL_04060 [Providencia alcalifaciens DSM
           30120]
          Length = 476

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGETF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +    ++     +     +P     +  + YR     V+ + L VQS
Sbjct: 214 ---DGEICSFAELLRLVASIDGIDRVRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I   R       +S D I   P +T   +E  ++     
Sbjct: 271 GSDRILTMMKRAHTALEYKAIIRKLREARPGILISSDFIVGFPGETTDDFEKTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D    +  +   GT    +  D       E + +    + Q   S 
Sbjct: 331 NFDMSYSFVYSARPGTPAADLPDDVSEDEKKERLYLLQQRINQQAMSF 378


>gi|254386091|ref|ZP_05001405.1| methylase of isopentenylated A37 derivatives in tRNA [Streptomyces
           sp. Mg1]
 gi|194344950|gb|EDX25916.1| methylase of isopentenylated A37 derivatives in tRNA [Streptomyces
           sp. Mg1]
          Length = 506

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 70/224 (31%), Gaps = 13/224 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFI--QSFLTE 58
           + L A+ + +  +  ++   +V     C   C +C     V   +  +E+          
Sbjct: 143 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC----IVPALRGKEEDRRPGDILAEV 198

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              + +     ++           L + +  + +L        +          +P    
Sbjct: 199 EALVAEGVSEITLLGQNVNAYGSDLGDREAFSKLLRACGGIEGLERVRF--TSPHPRDFT 256

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFD 174
            +      +    + ++ + +QS  +  LR + R++     +  I    A      +S D
Sbjct: 257 DDVIAAMAETPNVMPQLHMPLQSGSDPILRAMRRSYRQERFLGIIEKVRAAIPHAAISTD 316

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +I   P +T   ++  +         +   +Q +   GT    M
Sbjct: 317 IIVGFPGETEEDFQQTMHTVREARFANAFTFQYSKRPGTPAADM 360


>gi|92119034|ref|YP_578763.1| MiaB-like tRNA modifying enzyme [Nitrobacter hamburgensis X14]
 gi|91801928|gb|ABE64303.1| MiaB-like tRNA modifying enzyme [Nitrobacter hamburgensis X14]
          Length = 423

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPS 82
           C  +C +C   F        V     +      ++          +    +G    G P 
Sbjct: 154 CDHRCTFCIIPFG-RGNSRSVPMGAVVDQVRVLVEAGHAEIVLTGVDLTSYGADLPGGPR 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRISLGVQ 138
           L     I  IL  + +   +  +   +IEA+   ++               +  + L +Q
Sbjct: 213 L--GGLIKRILRHVPEMRRLRISSIDSIEADRDLLDAVANEERL-------MPHLHLSLQ 263

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S ++  L+ + R H+  +AI      R + P +    D+I   P +T   +   L     
Sbjct: 264 SGDDMILKRMKRRHSRRDAIDFCAQVRRLRPDIAFGADIIAGFPTETDDMFARSLDLVAD 323

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             +  L ++  +   GT   +M  
Sbjct: 324 CDLTFLHVFPYSPRPGTPAVRMPP 347


>gi|312135098|ref|YP_004002436.1| RNA modification enzyme, miab family [Caldicellulosiruptor
           owensensis OL]
 gi|311775149|gb|ADQ04636.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           owensensis OL]
          Length = 434

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 72/202 (35%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   ++S   E++  +        I+ I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRSLESIEEEVRRLVSNGYKEFVITGINISAYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +               + + L +QS  ++
Sbjct: 206 DGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLSFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+F+ R++  ++    +   +  +  ++F  D+I   P +T   +   L+         
Sbjct: 266 ILKFMNRHYTTAQYQDIVDRIKEKWDDVAFTTDIIVGFPGETEEDFNATLEFVQKIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ + +KGT  Y M    D
Sbjct: 326 IHVFRFSPKKGTKAYDMPNQVD 347


>gi|238755076|ref|ZP_04616424.1| hypothetical protein yruck0001_21560 [Yersinia ruckeri ATCC 29473]
 gi|238706780|gb|EEP99149.1| hypothetical protein yruck0001_21560 [Yersinia ruckeri ATCC 29473]
          Length = 474

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 68/226 (30%), Gaps = 18/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F              +   L E+  +    G R ++ +      + G   +
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGA--T 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                +I    + +     +     I     +P     +    Y      V+ + L VQS
Sbjct: 211 Y--DGDICRFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIAVYEDTPELVSFLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  + I   R   P +    D I   P ++   +E  +      
Sbjct: 269 GSDRILTMMKRAHTALEYKSIIRKLRKARPNIHISSDFIVGFPGESQADFEQTMTLVAEV 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             D    +  +   GT    +  D       + +      +TQ   
Sbjct: 329 NFDMSYSFIYSSRPGTPAADLPDDVSDDEKKQRLHALQERITQQAM 374


>gi|218782962|ref|YP_002434280.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764346|gb|ACL06812.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 533

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 76/210 (36%), Gaps = 17/210 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  KC +C     + R  VG +     ++  + E++ + +L   R    I       +  
Sbjct: 198 CPNKCIFC-----LGRRMVGHKVRYRSVKKVVDEIETLLELGFTR----INVADDLFTS- 247

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              N   + +   +          +  +  ++ +   F   R+ G + +S G++S  +  
Sbjct: 248 ---NKKRVREVCNEIKNRGLKFGWSAFSRVNTADKETFALMRETGCDCVSFGIESGNQDM 304

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + +    ++A  A+ + + +        +  LP +T        + A          
Sbjct: 305 LKRVKKGITLAQAEKAVKICKEVGILPHASFMVGLPGETHETMADSARFAKKLDA-IYGY 363

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           + L    GT   +   + DL + +++ ++ 
Sbjct: 364 HFLAPFPGTTVLENLDEYDLEILTDDWSLY 393


>gi|154485056|ref|ZP_02027504.1| hypothetical protein EUBVEN_02778 [Eubacterium ventriosum ATCC
           27560]
 gi|149734009|gb|EDM50128.1| hypothetical protein EUBVEN_02778 [Eubacterium ventriosum ATCC
           27560]
          Length = 301

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 76/247 (30%), Gaps = 27/247 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFF 76
           C  +        C +C   S+        +  + S   +++  +     +  +     +F
Sbjct: 29  CPNRDGTISTGGCIFC---SNGGSGDFAADKML-SITEQIESAKNRVSAKIKNGKYIAYF 84

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +  +   +  I      +  +   V ++I   P  +         +    +   +
Sbjct: 85  QSFTNTYGDIDYLRSIFTEAINHPDI---VALSIGTRPDCLPDEVLNLLGELNKIKPVWV 141

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++ E + +++ R +       A++    I   +   LI  LP ++       ++ 
Sbjct: 142 ELGLQTIHENTAKYINRGYTLDVFNTAVNNLNKINVDVIVHLIIGLPFESKEDILESVKY 201

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             S  +  + L  L + K T   K +             + +      I          I
Sbjct: 202 VSSMNISGIKLQLLHVLKNTPLEKEYSLNKF------EVLSMEEYVNIIAECLRYIPKSI 255

Query: 254 SNHSFLG 260
             H   G
Sbjct: 256 VIHRLTG 262


>gi|148380907|ref|YP_001255448.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931336|ref|YP_001385215.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
 gi|153937595|ref|YP_001388684.1| RNA modification protein [Clostridium botulinum A str. Hall]
 gi|148290391|emb|CAL84518.1| putative radical SAM superfamily protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152927380|gb|ABS32880.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933509|gb|ABS39008.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           Hall]
          Length = 432

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 68/203 (33%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC   F       K  ++          +  +       +S I        L  
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPEKIM----EEVEKLSKHGFKEIILSGIDIASYGFDLEG 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
             N+  IL+ I K   +      +I  +P+             ++       L +QS   
Sbjct: 208 KYNLTSILEEIDKVEGIERIRIGSI--DPTFFTEEEIIRISKLKRF-CPHFHLSLQSGCN 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           ++L+ + R +   +    +H  R     +S   D+I   P +T  ++    +      + 
Sbjct: 265 ETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRDIKLS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            + +++ +  KGT   +M    D
Sbjct: 325 KMHVFKFSPRKGTRAEEMKNQVD 347


>gi|146297053|ref|YP_001180824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|229890495|sp|A4XL48|MIAB_CALS8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145410629|gb|ABP67633.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 471

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 73/215 (33%), Gaps = 19/215 (8%)

Query: 17  NSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI- 74
             +  +V+  + C   C YC            +    +  + E+Q +    G + ++ + 
Sbjct: 179 EGVSAFVNIIYGCNNFCSYC---IVPYVRGRERSRRPEEIIFEIQQLAA-NGVKEVTLLG 234

Query: 75  ----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG- 129
                +G   P  I       +L+ +     +     +T  ++P  +        R    
Sbjct: 235 QNVNSYGKDLPDGIP---FYKLLEKVNAIEGIERIRFVT--SHPKDLSDELIFAMRDLEK 289

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               I L VQS   + LR + R++   + +  +   +   P ++   D+I   P +T   
Sbjct: 290 VCEHIHLPVQSGSTRILRQMNRHYTKEDYLRLVEKLKENIPDIAITTDIIVGFPGETEED 349

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           +E  L        D    +  +  KGT   +M   
Sbjct: 350 FEDTLDVVRKVEFDSAYTFIYSKRKGTKAAQMPNQ 384


>gi|297569925|ref|YP_003691269.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925840|gb|ADH86650.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 601

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 3/125 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E  P        +       G+ R  +G+QS    SL  + R  + + A  AI    
Sbjct: 272 FHFEIAPDLFTDQALEFLATVPPGLFRFEIGLQSFNPASLAAVNRYPDLARAREAIRRLV 331

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                 +  DLI  LP +T   +   L   ++     L L  L +   T      ++  L
Sbjct: 332 AGDNIHLHLDLILGLPFETRASYLESLNGIMALRPHQLQLGLLKVLPDTPLAARRQEFAL 391

Query: 225 VLPSE 229
               E
Sbjct: 392 RCCQE 396


>gi|85373609|ref|YP_457671.1| hypothetical protein ELI_03910 [Erythrobacter litoralis HTCC2594]
 gi|84786692|gb|ABC62874.1| hypothetical protein ELI_03910 [Erythrobacter litoralis HTCC2594]
          Length = 391

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C   C +C      +     Q   I   L  ++          + +      +G   P  
Sbjct: 122 CDHACTFC---VIPQGRGKSQSLSIAEVLRTVEHHLDRGAAEVVLTGVDVTSWGHDLPG- 177

Query: 84  IEPQN---IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
             P     +  +LD       +  +    IE + +  +      +    +  I L +Q  
Sbjct: 178 -SPALGSLVRAVLDAFPTLTRLRMSSIDGIEVDETLFD---LFAHEPRVMPHIHLSLQHG 233

Query: 141 EEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H+ ++A   +    A      +  DLI   P +T       L       
Sbjct: 234 HDLILKRMKRRHSRADAFDLVFRFKAARPEIAIGADLIAGFPTETEEHHAANLAIIRELD 293

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + H  ++  +   GT   +M +
Sbjct: 294 IVHGHIFPYSPRPGTPAARMPQ 315


>gi|254713652|ref|ZP_05175463.1| elongator protein 3 [Brucella ceti M644/93/1]
 gi|254715994|ref|ZP_05177805.1| elongator protein 3 [Brucella ceti M13/05/1]
 gi|261217762|ref|ZP_05932043.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261321390|ref|ZP_05960587.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260922851|gb|EEX89419.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294080|gb|EEX97576.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 427

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 77/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  + +  +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PGNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I     AR + P + F  D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|254482536|ref|ZP_05095775.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine gamma
           proteobacterium HTCC2148]
 gi|214037227|gb|EEB77895.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine gamma
           proteobacterium HTCC2148]
          Length = 443

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 60/193 (31%), Gaps = 14/193 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLIEPQNI 89
           C  YC F              +   + E+  +      + +  +   G    +     + 
Sbjct: 157 CSKYCTFCVVPYTRGEEVSRPLDDVIAEIAHLA----GKGVKEVNLLGQNVNAYRGDSHD 212

Query: 90  ALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I+D       V+    I       ++P          Y      V+ + L VQS  ++
Sbjct: 213 CEIVDFAELLHYVAKIPGIERIRYTTSHPVEFSDALINAYADIPQLVSHLHLPVQSGSDK 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R I P +S   D I   P +T   +   ++       D 
Sbjct: 273 ILAAMKRGHTALEYKSKIRHLRKIRPDISISSDFIIGFPGETEKDFADTMKLIEDIGFDV 332

Query: 202 LSLYQLTIEKGTL 214
              +  +   GT 
Sbjct: 333 SFSFIYSARPGTP 345


>gi|188590441|ref|YP_001919779.1| biotin synthase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500722|gb|ACD53858.1| radical SAM domain protein [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 348

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 89/258 (34%), Gaps = 36/258 (13%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++ +E  I                    +I   GG     
Sbjct: 60  CKRNCLYCGLRRDNKNIKRYRLSKEEIID--------FANKAVSYGYKTIVLQGGEDDFF 111

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I        N+ + +  +        ++ +++AG +R  L +++  ++ 
Sbjct: 112 TKEKMVEIIKEIK-------NLNVALTLSLGEKTYEEYKAFKEAGADRYLLRIETTNKKL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +    +  E +  +    ++   +   ++  LP QT+     ++        D + +
Sbjct: 165 YEEMDPMMSYDERLKCLENLGDLDYEVGTGILVGLPNQTLDSLADDILFFKKLNADMIGI 224

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
                 + T              + N+A+ +  +T+ +     +        +    ESL
Sbjct: 225 GPFIPNEDTPLKNSQGG------NLNLALKVMAITRLLLPDINIP-------ATTAMESL 271

Query: 265 HNLNYWRYGDYIGIGPGA 282
           H     + G  + +  GA
Sbjct: 272 H-----KNGRILALQSGA 284


>gi|94986752|ref|YP_594685.1| 2-methylthioadenine synthetase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731001|emb|CAJ54364.1| 2-methylthioadenine synthetase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 436

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 71/238 (29%), Gaps = 19/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC            +    +  L E+Q +        I S I     T +    
Sbjct: 151 CSHSCTYC---IIPSTRGKPKSRSPKECLIEIQQLLNAGFREIILSGINLRQYTATQQGC 207

Query: 87  QNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRK--AGVNRISLGVQSLE 141
           ++   +   + K  + +      +     +P+ +             G  ++ L +QS  
Sbjct: 208 KDFWELYSFLDKKLSPTWKGIARLRISSLDPAQLTQRGLDILSNSHMGCQQLHLSIQSGS 267

Query: 142 EQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            + L+ + R+H      +        I+ +     D I   P +T   ++  +       
Sbjct: 268 AEILKKMHRSHYTPQYLLDTTKKLSTIWHKFGLGADFIIGFPGETEKHFQETVDLIKELP 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ-------SITSAHGLH 249
           + +  ++  +    T+   +          +  A     +TQ        + +   LH
Sbjct: 328 LTYGHIFPFSARPNTIAATLPNHIKKSESQQRAATIRQLITQKEKIFHKQLLTMSTLH 385


>gi|24213088|ref|NP_710569.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45656240|ref|YP_000326.1| hypothetical protein LIC10336 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24193787|gb|AAN47587.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45599474|gb|AAS68963.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 437

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C +KC YC      +   +G     Q  L ++++++       + + +  G    S    
Sbjct: 156 CNRKCSYC---KIPQARGLGVSRNYQDVLDQVRFLQDNGVGEIVLTGVNLGWYRDSE-NK 211

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSL 145
           +    IL  I      S     +IE  P  V     +          + + +QS   + L
Sbjct: 212 KAFNKILGEILNILEYSRIRISSIE--PPDVGNELVELMTHPRFTPFLHIPLQSGNSEIL 269

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        + +A+   P +    D+I   P +T   ++  +          + 
Sbjct: 270 KKMKRTYTPETFRKRVEIAKEKIPNLFLGTDIIVGFPGETEEMFQDSVSMIRDLGFAKIH 329

Query: 204 LYQLTIEKGT 213
            +  ++ + T
Sbjct: 330 TFPFSVRRNT 339


>gi|123443200|ref|YP_001007174.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|229891035|sp|A1JQA3|MIAB_YERE8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|122090161|emb|CAL13024.1| putative tRNA-thiotransferase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 474

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 215 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTMKLVADVRFDT 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    +TQ    
Sbjct: 333 SYSFIYSPRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 375


>gi|315924493|ref|ZP_07920714.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622197|gb|EFV02157.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 444

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   +   R+       I +    +    +R+L      +   +G   P    
Sbjct: 154 CDNHCTYCAIPTIRGRHHSRTPEAILAEAKILYSSGVRELILVAQ-NLTQYGSDLP---G 209

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
            +N+A +L  +++         + +   P  +        +  +       + +Q  E +
Sbjct: 210 NENLASLLTQLSEKIPFKWIRLLYL--YPEGITEELLTAIKHHENICRYFDMPIQHTENE 267

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR+ + ++    + L R + P       +I   P ++  Q+E  L    +   + 
Sbjct: 268 ILKRMGRHIDKAQIYDKVKLIRKMLPDAVLRTTVIAGFPGESEAQFEEMLADLQTLRFER 327

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           L  +  + E+GT  Y M    D
Sbjct: 328 LGAFAYSREEGTPAYTMADQID 349


>gi|253584223|ref|ZP_04861421.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251834795|gb|EES63358.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 305

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 84/257 (32%), Gaps = 33/257 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF       ++  +  I+  L  ++   +    + I+ 
Sbjct: 33  CPNRDGTLSTKGCIFCSESGSGDF---AGSRRLSIDEQIEEQLKLIEN--KFPSGKVIA- 86

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---V 130
            +F   T +  +   +  I      +  V   + + I   P  +  N  +   +      
Sbjct: 87  -YFQNFTNTYADIDYLRKIYYEALSHPRV---IGLAIATRPDCLGENIIELLSEINNKYF 142

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E+  + + R ++      A    ++   +    +I  LP +        
Sbjct: 143 LWVELGLQTINEEVAKIINRQYSLKTYEEAAEKLKSRNIKFVTHIIIGLPGEKENDSLDT 202

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +       + ++ L I K T    ++K  +L +  ++         + +       +
Sbjct: 203 ALFSEKCGTWGIKIHLLHIIKNTKLETLYKKNELKIQKKD------EYVKKVVKILQNIS 256

Query: 251 YEISNHSFLGAESLHNL 267
           Y I  H   G  +   L
Sbjct: 257 YNIVIHRLTGDGNRDTL 273


>gi|239994932|ref|ZP_04715456.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alteromonas macleodii
           ATCC 27126]
          Length = 332

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 18/195 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F              +   L E+  +      + +  +   G   +    +N  
Sbjct: 121 CSKYCTFCVVPYTRGEEVSRPVDDVLLEIAQLA----GQGVREVNLLGQNVNAYRGENYD 176

Query: 91  -------LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                   +L+ +A    +      T  ++P     +  + Y      V+ + L VQS  
Sbjct: 177 GTICRFSELLELVAAIDGIDRIRYTT--SHPVEFTDDIIEAYASIPELVDHLHLPVQSGS 234

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + +   + I P +S   D I   P +T   +E  +    +   
Sbjct: 235 DRILNLMKRGHTAIEYKSKMRKLKKIRPNISLSSDFIIGFPGETDADFEATMDLIQAVDY 294

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 295 DLSFSFIYSARPGTP 309


>gi|229061375|ref|ZP_04198721.1| hypothetical protein bcere0026_34620 [Bacillus cereus AH603]
 gi|228717914|gb|EEL69560.1| hypothetical protein bcere0026_34620 [Bacillus cereus AH603]
          Length = 509

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIKEIRHLAA-NGYKEITLLGQNVNAYGKDF-- 274

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              ++I   + D + +   +         ++P   + +      K G  V  I L VQS 
Sbjct: 275 ---EDIQYGLGDLMDELRKIDIARIRFTTSHPRDFDNHLIDVLGKGGNLVEHIHLPVQSG 331

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +       
Sbjct: 332 STDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSLYREVG 391

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL 224
            D    +  +  +GT   KM  +  +
Sbjct: 392 FDTAFTFIYSPREGTPAAKMQDNVPM 417


>gi|170693394|ref|ZP_02884553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
           C4D1M]
 gi|170141549|gb|EDT09718.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
           C4D1M]
          Length = 461

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  ++
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTV 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 KYDTSFSFIYSPRPGTPAANLH 352


>gi|194335071|ref|YP_002016931.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312889|gb|ACF47284.1| Radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 473

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 85/258 (32%), Gaps = 19/258 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--FGGGTPSLIE 85
           C  +C +C   S     K      + + + E++ +R     R I+     F    P    
Sbjct: 201 CPYRCAFC--ESPAFWGKGVVYRSLDNVMNEIRELRTRWAKRQINLCDDTFVARRP---- 254

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
                 + +   +  +   +      A    V+ +  +   +AG + +  GV+S  +  L
Sbjct: 255 -----RVEEFCRRVISEKLDFRWECFARVDLVDPDLMKLMAEAGCSGVFFGVESGSDSVL 309

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    + A   I  A  IFP +    ++ LP +TM  +   +     +    + + 
Sbjct: 310 SRIDKRFTVARARDVISQAVKIFPHVYTSFVWGLPFETMEDFYDSILLMTEFGNSGVRVQ 369

Query: 206 --QLTIEKGTLFYKMHKDGDLV---LPSENVAVDLYNLTQSITSAHGLHA-YEISNHSFL 259
               ++  G   +  +         LP   + V    L   +      +    I+ +   
Sbjct: 370 RPHFSLRPGAPLFAEYGYDLAYSSSLPYHFLEVPRRFLPPEVEETIRRYPEIFITFYHIT 429

Query: 260 GAESLHNLNYWRYGDYIG 277
           G E      + R  + +G
Sbjct: 430 GLEFEEKQLFMRNLEALG 447


>gi|291280326|ref|YP_003497161.1| MiaB-like tRNA modifying enzyme YliG [Deferribacter desulfuricans
           SSM1]
 gi|290755028|dbj|BAI81405.1| MiaB-like tRNA modifying enzyme YliG [Deferribacter desulfuricans
           SSM1]
          Length = 449

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 20/195 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM----QWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC   S     K  + E+ ++     +    + +  ++   +   I   G   S
Sbjct: 148 CRNRCSYCTIPSIRGTQKSRKIEDILEEAQRLIDGGVKELILISQDTTKYGIDIYG---S 204

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +    I  +L+   K  ++  +  I  +  NP  V+             +N   + +Q 
Sbjct: 205 FM----IKPLLE---KLSSLEGDFYIRTLYLNPDGVDGELIDIILNNPKIINYFEIPIQH 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
           + ++ L+ + R  N+S       L +       +    I   P +T  ++   +     +
Sbjct: 258 INDRILKLMNRKFNSSHIKKIFTLIKEKSEDAFIRTTFIVGFPSETEEEFNEIIDFLHEF 317

Query: 198 AVDHLSLYQLTIEKG 212
             D    +    E G
Sbjct: 318 KPDFAGFFPFYPEDG 332


>gi|225023667|ref|ZP_03712859.1| hypothetical protein EIKCOROL_00530 [Eikenella corrodens ATCC
           23834]
 gi|224943549|gb|EEG24758.1| hypothetical protein EIKCOROL_00530 [Eikenella corrodens ATCC
           23834]
          Length = 88

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQ---RQGFIERVQ 372
           VE+  ++S +   EF++  +RL +G+  + ++   G +L     R LQ   R G I+   
Sbjct: 9   VERFQVASSELPFEFMLNAMRLTDGVPARLFQERTGHSL-AAIARPLQEATRLGLIDP-D 66

Query: 373 FSRLRCTQRGMTMLDSVI 390
            + LR T+RG   L+ ++
Sbjct: 67  PTLLRPTERGQRYLNDLL 84


>gi|116327128|ref|YP_796848.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332215|ref|YP_801933.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116119872|gb|ABJ77915.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125904|gb|ABJ77175.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 443

 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 64/192 (33%), Gaps = 14/192 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C ++C YC      +   +G     Q  L ++ +++       + +   + +        
Sbjct: 157 CNRRCSYC---KIPQARGLGVSRKYQDVLDQVHFLQDHGVGEIVLTGVNLGWYRDGE--- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQ 143
             +    IL  I K    S     +IE  P  V     +          + + +QS   +
Sbjct: 211 NKKAFNKILADILKILEYSRIRISSIE--PPDVGNELVELMTHPRFTPFLHVPLQSGNAE 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +        + +A+   P +    D+I   P +T   +   ++         
Sbjct: 269 ILKKMKRTYTPETFRKRVEIAKEKIPNLFLGTDIIVGFPGETEEMFLDSVKMIQDLGFAK 328

Query: 202 LSLYQLTIEKGT 213
           +  +  ++ + T
Sbjct: 329 IHAFPFSVRRNT 340


>gi|289550484|ref|YP_003471388.1| putative Fe-S oxidoreductase [Staphylococcus lugdunensis HKU09-01]
 gi|315657974|ref|ZP_07910848.1| radical SAM protein [Staphylococcus lugdunensis M23590]
 gi|289180016|gb|ADC87261.1| putative Fe-S oxidoreductase [Staphylococcus lugdunensis HKU09-01]
 gi|315497010|gb|EFU85331.1| radical SAM protein [Staphylococcus lugdunensis M23590]
          Length = 317

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C   +    +   + + I+    +++              +F   T +    + +  
Sbjct: 52  CTFCS-AAGSGDFAGNRADPIEVQFQQIKAKMHEKWHEGKYIAYFQAFTNTHAPVEILKE 110

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + + +   V   V ++I   P  +  +  +   +        + LG+Q++ + +   +
Sbjct: 111 KYEPVLQEEGV---VGLSIATRPDCLPDDVVEYLAELNKRTYLWVELGLQTIHQSTSDLI 167

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R H+       +   R     +   +I  LP +         +      V  + ++ L 
Sbjct: 168 NRAHDMQTYYDGVAKLRKHNINICTHIINGLPGEDYDMMMATAREVAKMDVQGIKIHLLH 227

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + KGT   K +  G L   S+    +L      I     +  
Sbjct: 228 LLKGTPMVKQYDKGLLKFMSQQEYTNLVCDQLEILPPEMIIH 269


>gi|318604777|emb|CBY26275.1| tRNA-i(6)A37 methylthiotransferase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 461

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 144 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 202 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 260 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTMKLVADVRFDT 319

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    +TQ    
Sbjct: 320 SYSFIYSPRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 362


>gi|294634689|ref|ZP_06713222.1| radical SAM protein [Edwardsiella tarda ATCC 23685]
 gi|291091935|gb|EFE24496.1| radical SAM protein [Edwardsiella tarda ATCC 23685]
          Length = 204

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 12/168 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        ++   +S   ++    +          +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEQMQQRSIAEQLAAQARKVNRARRYLAYFQAYTSTY---AEVCI 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRF 147
           +     +    +  V + +   P  V     +    YR  G      LG+QS  +++L  
Sbjct: 97  LRQMYQEALQQADMVGLCVGTRPDCVPESVLDLLAEYRDQGYEVWLELGLQSAHDRTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           + R H+ +        AR    ++   LI  LP ++ T     LQR +
Sbjct: 157 INRGHDFACYQRTTRAARARGLKVCSHLIVGLPGESHTDCLATLQRVV 204


>gi|319790575|ref|YP_004152208.1| RNA modification enzyme, MiaB family [Thermovibrio ammonificans
           HB-1]
 gi|317115077|gb|ADU97567.1| RNA modification enzyme, MiaB family [Thermovibrio ammonificans
           HB-1]
          Length = 442

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 25/197 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-------FGGGT 80
           C + C YC     +  +  G+E  +   L  ++ +++L   R +  +        F G  
Sbjct: 157 CNRFCTYC-----IVPFTRGRERSVAPHL-VVEEVKRL-AERGVKEVHLLGQNVDFYGYQ 209

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +     ++A +L  +++   V      T  ++P+       +  R        + L  Q
Sbjct: 210 GT-----DLADLLYMVSEVEGVERVRFTT--SHPAGFSERIARAIRDIPKVCPYVHLPPQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L  + R +   E I  + + R   P ++   D I   P +T   +E  L     
Sbjct: 263 SGSNRVLERMNRGYTREEYIEKVQMLREFVPNVALSGDFIVGFPGETEEDFEQTLSLVEE 322

Query: 197 YAVDHLSLYQLTIEKGT 213
              D   +++ +    T
Sbjct: 323 CVFDQAFVFEYSPRPFT 339


>gi|297156736|gb|ADI06448.1| adenosine tRNA methylthiotransferase [Streptomyces bingchenggensis
           BCW-1]
          Length = 497

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 134 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVET 191

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 192 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNVSGLERVRF--TSPHPRDFTDD 249

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLI 176
                 +    + ++ + +QS  +  L+ + R++     +  I    A      +S D+I
Sbjct: 250 VIAAMAETENVMPQLHMPLQSGSDTVLKAMRRSYRQERYLGIIEKVRAAMPDAAISTDII 309

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 310 VGFPGETDADFEQTLHVVREARFAQAFTFQYSKRPGTPAAEM 351


>gi|229012956|ref|ZP_04170121.1| hypothetical protein bmyco0001_33940 [Bacillus mycoides DSM 2048]
 gi|228748210|gb|EEL98070.1| hypothetical protein bmyco0001_33940 [Bacillus mycoides DSM 2048]
          Length = 509

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIKEIRHLAA-NGYKEITLLGQNVNAYGKDF-- 274

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              ++I   + D + +   +         ++P   + +      K G  V  I L VQS 
Sbjct: 275 ---EDIQYGLGDLMDELRKIDIARIRFTTSHPRDFDNHLIDVLGKGGNLVEHIHLPVQSG 331

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +       
Sbjct: 332 STDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSLYREVG 391

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL 224
            D    +  +  +GT   KM  +  +
Sbjct: 392 FDTAFTFIYSPREGTPAAKMQDNVPM 417


>gi|119477442|ref|ZP_01617633.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine gamma
           proteobacterium HTCC2143]
 gi|119449368|gb|EAW30607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [marine gamma
           proteobacterium HTCC2143]
          Length = 465

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 21/218 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR---- 63
           + +    S+    +V     C K   YC F                  + E+  +     
Sbjct: 161 DALPEPSSDGPSAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPFDDVIAEIAHLTSQGV 217

Query: 64  ---QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L G    +            E    A +L  +A    +      T  ++P      
Sbjct: 218 KEVNLLGQNVNAYRGENHEA----EIVEFAELLHFVAAVPGIERIRYTT--SHPVEFSDA 271

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
             + Y      V+ + L VQS  ++ L  + R H  +E I  +   ++I P +SF  D I
Sbjct: 272 LIEAYADIPELVSHLHLPVQSGSDRILAAMKRGHTRAEYIEKMSRLKDIRPDISFSSDFI 331

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              P +T   ++  +        D    +  +   GT 
Sbjct: 332 IGFPGETEQDFQDTMALITEIGFDTSFSFIYSARPGTP 369


>gi|78044992|ref|YP_361242.1| biotin synthase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77997107|gb|ABB16006.1| radical SAM domain protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 308

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 12/191 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C + C YC     +RR       +  S    ++  +++      + +   G  P     
Sbjct: 35  YCRRNCLYCG----LRRDNTKLGRYRMSPEEIIKRAKEVAALGIKTVVLQSGEDP----- 85

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                + D +     +   + + +  +   +  + ++  +KAG +R  L  ++   +   
Sbjct: 86  --YYKLKDLVGIVSRIKE-LGVYVTLSIGELSTHAYRELKKAGADRYLLRHETANRKLYE 142

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L  + +    +  ++  +++   +    +  LP QT      +L        + + +  
Sbjct: 143 VLHPDGSFFNRVRCLYALKDLGYEVGAGNMVGLPGQTDDMLWEDLLFMEKLQPEMVGIGP 202

Query: 207 LTIEKGTLFYK 217
                 T   K
Sbjct: 203 FIPHPDTPLAK 213


>gi|78042734|ref|YP_360230.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|123576193|sp|Q3ACA4|MIAB_CARHZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|77994849|gb|ABB13748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 440

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +Q +RQL           G    S    +
Sbjct: 159 CNNFCTYC-----IVPYVRGRERSRKK-EDILQEIRQLVAEGYREVTLLGQNVNSYGKDL 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + + +   L    +       V  T   +P  +  +  +    +      + L VQ+   
Sbjct: 213 KGKPMFAELLADIEKIDGLWRVRFTTS-HPRDLTDDVIEVMASSRKICEHLHLPVQAGSN 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +     +  +   R   P++SF  D+I   P +T   +E  L        D
Sbjct: 272 KILKAMHRGYTREYYLNLVEKIRAKIPKVSFTTDIIVGFPGETEEDFEQTLDLVRKVRYD 331

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +      GT   +M
Sbjct: 332 SAFTFVYNKRTGTPAAEM 349


>gi|83589960|ref|YP_429969.1| tRNA-i(6)A37 modification enzyme MiaB [Moorella thermoacetica ATCC
           39073]
 gi|123725725|sp|Q2RJG3|MIAB_MOOTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83572874|gb|ABC19426.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moorella thermoacetica
           ATCC 39073]
          Length = 444

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +++L     I     G    S    L
Sbjct: 161 CNNFCTYC-----IVPYVRGRERS-RRPENIIKEVKELVDQGVIEVTLLGQNVNSYGRDL 214

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  N A +L+ +     +     +T  ++P            +       + L VQ+  
Sbjct: 215 RDGINFAGLLERVNAVEGLKRIRYVT--SHPRDFTPELVTTISRLDKVCEHVHLPVQAGS 272

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +  +   R   P +S   DLI   P +T   +E  L        
Sbjct: 273 NRILELMHRGYTREHYLELVADLRRHIPGISLTTDLIVGFPGETEADFEDTLDLVARVQF 332

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D+   +  +  +GT    M 
Sbjct: 333 DNAFTFMYSPRRGTEAATMP 352


>gi|73619526|sp|Q7X2C7|BCHE_RHOGE RecName: Full=Anaerobic magnesium-protoporphyrin IX monomethyl
           ester [oxidative] cyclase; Short=Anaerobic
           Mg-protoporphyrin IX monomethyl ester oxidative cyclase
 gi|32187101|gb|AAP73428.1| anaerobic Mg-protoporphyrin IX monomethyl ester cyclase [Rubrivivax
           gelatinosus]
          Length = 555

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 24/210 (11%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  I+     +  +  L    
Sbjct: 187 YIYIPMNKRVAIPNFARGCPFTCSFCS------QWKFWRDYRIRDPKKVVDEIEVLVKQH 240

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRK 127
            +         P++    +    ++   +       V   I    + +  +      +RK
Sbjct: 241 DVGFFILADEEPTI----HRKKFIEFCEELIKRDLGVLWGINTRVTDILRDEKLLPLFRK 296

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  +SLG ++  +  L  + +     +   AI L ++         I  L  +T    
Sbjct: 297 AGLIHVSLGTEAAAQLKLDMVNKETTIEQNKRAIQLLKDNGIVTEAQFIVGLENETAETL 356

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           E   + A  +  D  +    T    +  ++
Sbjct: 357 EETYKMARDWNPDMANWAMYTPWPFSDLFQ 386


>gi|332799273|ref|YP_004460772.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Tepidanaerobacter sp. Re1]
 gi|332697008|gb|AEE91465.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Tepidanaerobacter sp. Re1]
          Length = 437

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 64/202 (31%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC                    L E++ +        I     G    S  +  
Sbjct: 155 CNNYCSYC---IVPYVRGKEVSRRPDDILREIETLAN---NGFIEINLLGQNVNSYGKDL 208

Query: 88  NIALIL-DGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           NI +   + + +   V     I  I ++P  +        R        I L VQS   Q
Sbjct: 209 NIPVTFPELLRRVNDVDGIKRIRFITSHPKDLSNELILAMRDCKKVCEHIHLPVQSGSNQ 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R +     I  I+  R+  P ++   D+I   P +T   +   L+   +   D 
Sbjct: 269 ILSKMNRKYTREHYIELIYKLRDAIPNIAITTDIIVGFPGETEKDFLDTLELVKAVEFDS 328

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
              +  +  KGT   KM    D
Sbjct: 329 AFTFMYSKRKGTPAAKMADQID 350


>gi|297617812|ref|YP_003702971.1| MiaB-like tRNA modifying enzyme [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145649|gb|ADI02406.1| MiaB-like tRNA modifying enzyme [Syntrophothermus lipocalidus DSM
           12680]
          Length = 444

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 63/201 (31%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +    +  + E+ W+        + +    G     +   
Sbjct: 156 CESYCSYC---LVPYARGPVRSKLPEDVVREIDWLVSAGFKEIVITGIHTGMYGKDLADW 212

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           ++  +L+ +     V  +  + +    P+ +     +     K     + + +QS  ++ 
Sbjct: 213 DLVRLLETV--LVKVQGDYRLRLSSIEPTEITKKLIELMASEKKLCRHLHIPLQSGSDRV 270

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        + +         ++ D++   P ++   +   L+         L
Sbjct: 271 LKLMNRRYTRGFYRDLVMMVTGRVPGTAVTSDVMVGFPTESEEDFLDTLKLIDELPFAGL 330

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++  +    T    ++   +
Sbjct: 331 HVFPYSPRPNTAATDLYPRVE 351


>gi|126663275|ref|ZP_01734273.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BAL38]
 gi|126624933|gb|EAZ95623.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BAL38]
          Length = 482

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 70/210 (33%), Gaps = 21/210 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    QS + E+Q +         L G    S +++GGG 
Sbjct: 178 CDNMCTFC---VVPFTRGRERSREPQSIIDEIQDLYDRGFKEVTLLGQNVDSYLWYGGGL 234

Query: 81  ------PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VN 131
                  + I+          + K  T+   +       NP  +         K     N
Sbjct: 235 KKDYDKATEIQKATAMDFAQLLDKCATLFPKMRFRFSTSNPQDMHEEVLHVIAKHHNICN 294

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R H   E +A I    +I P +S   D+I   P +T    + 
Sbjct: 295 YIHLPVQSGSTRILKEMNRQHTREEYMALIDKIYSIIPDISLSQDMIAGFPTETEEDHQD 354

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            L        D   ++  +   GTL  +  
Sbjct: 355 TLSLMEYVKYDFGFMFAYSERPGTLAARKM 384


>gi|325291790|ref|YP_004277654.1| miaB protein [Agrobacterium sp. H13-3]
 gi|325059643|gb|ADY63334.1| miaB protein [Agrobacterium sp. H13-3]
          Length = 467

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 70/199 (35%), Gaps = 22/199 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C          S   R  V +    + + + E+  + Q           + G 
Sbjct: 183 CDKFCTFCVVPYTRGSEVSRPVRQIVDEAMKLVDAGVREITLLGQNVN-------AWQGE 235

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGV 137
             S  E   +A +L  +A+   ++     T  ++P  ++      +R   +    + L V
Sbjct: 236 G-SKGEKWGLAELLYRLAEIPGLARLRYTT--SHPRDMDDRLIGAHRDLRILMPYLHLPV 292

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R H   E I  I   R   P ++   D I   P +T   +E  +    
Sbjct: 293 QSGSDRILKAMNRRHTGEEYIQLIEKIRAARPDIAMSGDFIVGFPGETDRDFEDTMAIIE 352

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    ++ +   GT 
Sbjct: 353 QVKYAQAFSFKYSTRPGTP 371


>gi|291556837|emb|CBL33954.1| radical SAM protein, TIGR01212 family [Eubacterium siraeum V10Sc8a]
          Length = 320

 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 13/203 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISSIFF 76
           C  K        C YC   S     K   E +  S   ++   ++      P S+ + +F
Sbjct: 42  CPNKDGTKGTGGCIYCMGGSGYFTEKSDGEIY-DSVKRQLAAEKERIYKKHPNSLITAYF 100

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
              T +      +         +     ++    +  P  V               + LG
Sbjct: 101 QANTNTYAPVATLKEAYTAALDSGVHGISIGTRADCLPDDVIA-LLCDINSKTHLTVELG 159

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ +++ + + R ++  E +      +    R    LI  LP +T        +    
Sbjct: 160 LQTVHDKTAQIINRCYSYDEFLEGYRKLQESGIRTCLHLIDGLPDETKADMLETAKEVAR 219

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
                + ++ L I  GT   ++ 
Sbjct: 220 LHPAAVKIHLLHINHGTALERLF 242


>gi|315924411|ref|ZP_07920633.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622290|gb|EFV02249.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 432

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 29/260 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C + C YC            +   I S   E+Q +        + S      +G   P  
Sbjct: 154 CNQFCTYC---IVPYARGRIRSRRIDSVCEEVQLLASDGFKEFVLSGIHIASYGKDMP-- 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               ++  ++  +     V+     +IE  P  +      G  +         L +QS  
Sbjct: 209 -GGPDLLTLIRAVDAIPGVARIRLGSIE--PLLMTETFVAGLSEIKSFCPHFHLSLQSGC 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR + R++   +    +   R  F +  ++ D+I   P +T  +++       +   
Sbjct: 266 DAVLRRMNRHYTTEQYFEIVQRIRRYFSKPAITTDVIVGFPGETDEEFQATKDFMTAVNF 325

Query: 200 DHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI--- 253
             + +++ +   GT    F     +      S+++        Q+    +      +   
Sbjct: 326 YKVHVFKYSKRHGTPAADFEGQVDETTKHRRSQDLIALSREQEQAFLKENAGERMPVLFE 385

Query: 254 ---SNHSFLGAESLHNLNYW 270
              +NH   G    H  NY 
Sbjct: 386 QLQANHRIEG----HTPNYI 401


>gi|309800615|ref|ZP_07694759.1| radical SAM protein, family [Streptococcus infantis SK1302]
 gi|308115761|gb|EFO53293.1| radical SAM protein, family [Streptococcus infantis SK1302]
          Length = 325

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 52  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVKKYLVYFQNFTNT---HEKLEV 108

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 109 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYEATSELI 168

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 169 NRAHSYELYVETVKRLRKYPKIEIVAHLINGLPGETHDMMVENVRRCVTDNDIQGIKLHL 228

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 229 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 272


>gi|260893108|ref|YP_003239205.1| Radical SAM domain protein [Ammonifex degensii KC4]
 gi|260865249|gb|ACX52355.1| Radical SAM domain protein [Ammonifex degensii KC4]
          Length = 360

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 62/191 (32%), Gaps = 12/191 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +RR       +  +    +Q   +       + +   G  P    P
Sbjct: 66  FCRNNCLYCG----LRRENRRLPRYRMAAREVVQAAEEAAAQGFKTVVLQSGEDP-YWTP 120

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +A ++  I K         + +  +   ++  ++   ++AG +R  L  ++ +     
Sbjct: 121 ERLAEVVKEIKKLG-------VAVTLSVGELDYEDYALLKEAGADRYLLRHETADPSLFA 173

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L  + + +     +   + +        +  LP Q++     ++       V+   +  
Sbjct: 174 QLKPDSSLARRRQCLEWLKELGYETGAGCMVGLPGQSLESLAEDVLFMRELQVEMAGIGP 233

Query: 207 LTIEKGTLFYK 217
                 T   K
Sbjct: 234 FIPHPDTPLGK 244


>gi|167749129|ref|ZP_02421256.1| hypothetical protein EUBSIR_00073 [Eubacterium siraeum DSM 15702]
 gi|167657902|gb|EDS02032.1| hypothetical protein EUBSIR_00073 [Eubacterium siraeum DSM 15702]
          Length = 320

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 13/203 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  K        C YC   S     K   E +  S   ++   ++    +  +S+     
Sbjct: 42  CPNKDGTKGTGGCIYCMGGSGYFTEKSDGEIY-DSVKRQLAAEKERIYKKHPNSLITAYF 100

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
             +      +A + +        S    I+I      +  +               + LG
Sbjct: 101 QTNTNTYAPVATLKEAYTAALD-SGVHGISIGTRADCLPDDVIALLCDINSKTHLTVELG 159

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ +++ + + R ++  E +      +    R    LI  LP +T        +    
Sbjct: 160 LQTVHDKTAQIINRCYSYDEFLEGYRKLQESGIRTCLHLIDGLPGETKADMLETAKEVAR 219

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
                + ++ L I  GT   ++ 
Sbjct: 220 LHPAAVKIHLLHINHGTALERLF 242


>gi|167625134|ref|YP_001675428.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           halifaxensis HAW-EB4]
 gi|229890651|sp|B0TR38|MIAB_SHEHH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|167355156|gb|ABZ77769.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella halifaxensis
           HAW-EB4]
          Length = 475

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 76/252 (30%), Gaps = 18/252 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K   YC F              +   + E+  +
Sbjct: 133 IEKFDRLPEPRADGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPLDDIILEIAQL 188

Query: 63  RQLTGPRSI----SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSV 117
            +  G R +     ++    G         I    + +     +     +     +P   
Sbjct: 189 AEQ-GVREVNLLGQNVNAYRGAT---HDDEICTFAELLRYVAAIDGIDRLRFTTSHPIEF 244

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SF 173
             +    Y      V+ + L VQS  +  L  + R H A E  + I   R   P +  S 
Sbjct: 245 TQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRLRKARPDILISS 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           D I   P ++   +   ++       DH   +  +   GT    +  D  L    E +A+
Sbjct: 305 DFIIGFPGESKQDFADTMKLIEDIQFDHSFSFIYSARPGTPAADLPDDVSLDEKKERLAI 364

Query: 234 DLYNLTQSITSA 245
               +TQ     
Sbjct: 365 LQDRITQQAMRY 376


>gi|163867522|ref|YP_001608721.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bartonella
           tribocorum CIP 105476]
 gi|229890428|sp|A9IMW7|MIAB_BART1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|161017168|emb|CAK00726.1| bifunctional enzyme [Bartonella tribocorum CIP 105476]
          Length = 458

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 70/212 (33%), Gaps = 30/212 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C     V  Y  G E  I   + ++    +      +  I       +L+   
Sbjct: 175 CDKFCTFC-----VVPYTRGAE--ISRSVEQITEEARQLIEAGVKEI-------TLLGQN 220

Query: 86  ---------PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--I 133
                          + D +     +     +     +P  ++ +    +R   +    +
Sbjct: 221 VNGWHGQSADGKTWRLGDLLYHLAKLDGLKRLRYTTSHPRDMDDSLIAAHRDLDMLMPYL 280

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L VQS  ++ L+ + R H +S  +  I   R   P ++F  D I   P +T   +E  +
Sbjct: 281 HLPVQSGSDRILKAMNRQHKSSYYLHLIEKIRAARPDIAFSGDFIVGFPGETDEDFEETI 340

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +            ++ +   GT+   M    D
Sbjct: 341 KLIQQVQYSSAYSFKYSPRPGTVGATMKNHVD 372


>gi|297619908|ref|YP_003708013.1| Radical SAM domain-containing protein [Methanococcus voltae A3]
 gi|297378885|gb|ADI37040.1| Radical SAM domain protein [Methanococcus voltae A3]
          Length = 389

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 14/197 (7%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C +C     F  ++R  K+     I   +  M+ +R    P ++S        P+L
Sbjct: 161 CPYNCRFCQTPQIFGKNIRHRKIDD---IVKIVKNMKDIR-FVTPNALSYGSKYATKPNL 216

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
            + + +   L    +   + +      E  P  +             N+ +  G QS  +
Sbjct: 217 EKLEELLKKLSEFKERLFLGT---FPSEVRPEFINEETLNLILTYCDNKYLHFGAQSGCD 273

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVD 200
           + L+++ R H  ++ + AI L +        D I+  P +T+        L + +     
Sbjct: 274 EMLKYIRRGHTVNDVLNAIDLCKKNKLMPKVDFIFGFPNETIENRLKSIELMKYIIKKNG 333

Query: 201 HLSLYQLTIEKGTLFYK 217
            +  +      GT F K
Sbjct: 334 TVHAHYFMPLPGTYFEK 350


>gi|219668765|ref|YP_002459200.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Desulfitobacterium hafniense DCB-2]
 gi|219539025|gb|ACL20764.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfitobacterium
           hafniense DCB-2]
          Length = 447

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 17/228 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           + ++       L  YV+  + C   C YC    HVR  +  ++   +  L E++ + + T
Sbjct: 141 QESVLLAAKGKLKAYVNISYGCNNFCTYC-IVPHVRGRERSRQP--EEILAEIRALVE-T 196

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI----TIEANPSSVEVNNF 122
           G R ++ +  G    S    Q++    D       V S   +     + ++P  +     
Sbjct: 197 GCREVTLL--GQNVNSY--GQDLDRAYDFADLLKDVDSIDGLWRVRFMTSHPKDLSDKLI 252

Query: 123 QGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
           +           I L  Q+  ++ L+ + R +     ++ I   + I P++S   D+I  
Sbjct: 253 ETIAAGTHLCEHIHLPFQAGSDEILKGMNRKYTREYYLSRIAQIKAIIPQVSLTTDIIVG 312

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            P +T   +E  L             +  +   GT   +M +   L +
Sbjct: 313 FPGETEEDFEQTLALIRQVKYSQAFTFMYSKRSGTPAAQMAEQIPLDI 360


>gi|85714185|ref|ZP_01045174.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter sp. Nb-311A]
 gi|85699311|gb|EAQ37179.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter sp. Nb-311A]
          Length = 478

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +     ++Q +    G R I+ I      + G  P 
Sbjct: 174 CDKFCTFC---VVPYTRGAEVSRPVAKIAEDVQRLAD-NGVREITLIGQNVNAYHGEGPD 229

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
              P     +L  +A+   +      T  ++P  VE +    +R   A +  + L VQS 
Sbjct: 230 G-RPWPFGKLLYRLAEIPGIVRLRYST--SHPRDVEDSLIDAHRHLDALMPFVHLPVQSG 286

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H+AS+    I   R+    +  S D I   P +T   +   L       
Sbjct: 287 SDRILAAMNRRHSASDYRRVIDRFRHARQDIAFSSDFIVGFPGETEEDFAATLALVGQIG 346

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
                 ++ +   GT   ++ 
Sbjct: 347 YAAAYSFKYSPRPGTPAAELR 367


>gi|315187099|gb|EFU20856.1| MiaB-like tRNA modifying enzyme [Spirochaeta thermophila DSM 6578]
          Length = 445

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 10/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC       R  + +   +      +    Q    R +S I   G   +    +
Sbjct: 164 CDRRCTYC-------RVPLARGRAVSDDPARILQRVQELEGRGVSEIVLTGVNLAQYRWE 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSLR 146
           ++ L    +      S          P       +       +     L VQS   + LR
Sbjct: 217 SLDLGGLLLRLLSHTSRLRFRISSLEPEGFSEALWDALSSPRICPHFHLPVQSGSNRVLR 276

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            +GR + A E  A I   R++     +S D I   P +T   +E         A     L
Sbjct: 277 KMGRWYTAEEISALIARLRDVSTDPFISGDFIVGFPGETREDFEATRAFLDENAFSGAHL 336

Query: 205 YQLTIEKGTLFY 216
           ++ +   GT  Y
Sbjct: 337 FRYSPRPGTAAY 348


>gi|193212987|ref|YP_001998940.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193086464|gb|ACF11740.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 468

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 76/237 (32%), Gaps = 23/237 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     K  +   I   L EM+  ++  G   +   F          P+
Sbjct: 206 CPVGCSFC--TTPTVYGKSYRYREIDLVLDEMRAHQERLGKEKVRFSFMDDNI--SFRPK 261

Query: 88  NIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
               +L+G+AK     ++N+ +     P        +   ++G + +S+G +SL    L+
Sbjct: 262 YFMELLEGMAKLGVRWNANISMNFLHKP-----EVAEVAGRSGCDLMSIGFESLNPDILK 316

Query: 147 FLG----RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +     R  N      A++        +    ++         ++      +   ++  
Sbjct: 317 TMNKGSNRLQNYE---TAVNNLHKNKIAIQGYFMFGFDDDNEKSFQATYDFIMQNRIEFP 373

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
               +T   GT +++  KD    L  +      Y         + +         E+
Sbjct: 374 VFSLVTPFPGTPYFEEMKDRVRHLDWDKYDTYHYMFEPKKLGGEKLLENFIKLQREV 430


>gi|21674143|ref|NP_662208.1| BchE/P-methylase family protein [Chlorobium tepidum TLS]
          Length = 468

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 74/234 (31%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     K  +   I   L EM+  ++  G + +   F          P+
Sbjct: 206 CPVGCSFC--TTPTVYGKSFRYREIDLVLDEMRAHQERLGKKKVRFSFMDDNI--SFRPK 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+G+AK       V      + + ++         ++G   +S+G +SL    L+
Sbjct: 262 YFMELLEGMAKL-----GVRWNANISMNFLQKPEVAELAGRSGCELMSIGFESLNPDILK 316

Query: 147 FLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N  +   A+          +    I+     +   ++      +   ++     
Sbjct: 317 SMNKGSNRLQNYEAVVSNLHKHKIAIQGYFIFGFDDDSEKSFQATYDFIMQNRIEFPVFS 376

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
            LT   GT +++  KD       +      Y         + +         E+
Sbjct: 377 LLTPFPGTPYFEEMKDRVRHFDWDKYDTYHYMFEPKKLGGEKLLENFIKLQREV 430


>gi|315924594|ref|ZP_07920813.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622124|gb|EFV02086.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 443

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 76/245 (31%), Gaps = 13/245 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +     +  ++ L     +     G    S    +
Sbjct: 162 CNNFCTYC-----IVPYTRGREVS-RPHEKIIDEVKALVADGCLEVTLLGQNVNSYGNDR 215

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                   + ++      +E    + ++P  +                 + L VQS   +
Sbjct: 216 KDGYGFADLLRDVNAIEGLERIRFMTSHPKDMTDEVIDAVAACDKVCPVVHLAVQSGSTK 275

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +   + IA +       P ++   DLI   P +T T +E  L        D 
Sbjct: 276 VLKAMHRGYTKEKIIALVEKMHKRIPHVAITTDLIVGFPGETETDFEETLDIVRRCHFDA 335

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
              +  +I  GT   KM       +  E +   L  L       +     +  +    G 
Sbjct: 336 AFSFLYSIRTGTPAAKMPDQIPENIKHERLNRLLKVLHSEGNERNLWFQDQTVDVLVEGK 395

Query: 262 ESLHN 266
            S HN
Sbjct: 396 -STHN 399


>gi|300113051|ref|YP_003759626.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus watsonii
           C-113]
 gi|299538988|gb|ADJ27305.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus watsonii
           C-113]
          Length = 447

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 20/220 (9%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGGTPS 82
           C  YC F              +   + E+  + +        L    +      G G   
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPLDDVVAEIVGLAEQGVREITLLGQNVNAYRGAMGEG--- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++AL+++ +A    +      T  ++P     +  Q + +     + + L VQS 
Sbjct: 214 --DVADLALLINYVASIEGIERIRFTT--SHPVEFSDSLIQAFAEVPELASHLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H   E  A +   R + P +S   D I  LP +T   ++  L       
Sbjct: 270 SDRMLGLMKRGHTVLEYKAKLRKLRQVRPDISISSDFIVGLPGETEADFQATLALVDEVG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            DH   +  +   GT    +     + +  E +A+    L
Sbjct: 330 FDHSFSFVYSPRPGTPAASLPDHTPIAVKKERLAILQERL 369


>gi|257469812|ref|ZP_05633904.1| radical SAM superfamily lipoprotein [Fusobacterium ulcerans ATCC
           49185]
 gi|317064042|ref|ZP_07928527.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
 gi|313689718|gb|EFS26553.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
          Length = 294

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 18/206 (8%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + K      I+   +E+++ R+         +  G     +I  
Sbjct: 30  CSHNKCTFCS----MYKSKKFSIKPIEKIKSEIEYFRKRVKYAERIFLADGDAM--IIPT 83

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  IL  I K         I+  A P S+     +  +  R++G++ + +G++S +++
Sbjct: 84  EMLLEILAYIKK--VFPECKRISSYATPKSIELKTNDELRKIRESGISLLYIGLESGDDK 141

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM----ELQRALSYAV 199
            L  + +  ++ E  A    A+     +S   I  +       W+       +       
Sbjct: 142 VLEKINKGVSSDELTALCKKAKEAGFFLSVTFIAGILG--KKDWKDHAVNTGKLISRIEP 199

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLV 225
           D++ +  L +E+GT  Y  +  G+  
Sbjct: 200 DYVGILSLMLEEGTEIYTEYLKGEFQ 225


>gi|302392256|ref|YP_003828076.1| radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302204333|gb|ADL13011.1| Radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 291

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 85/248 (34%), Gaps = 20/248 (8%)

Query: 28  CVKK-CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C+    + + K  +   I+    ++   +   G  +       G +  L++ 
Sbjct: 25  CPHNQCNFCN----MYKEKKFKIRPIEEIKEDLDEAKNHYGVNARRLFLADGNS-ILMKT 79

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  +L+   + +     V     A   ++  +   +  + AG+ RI  G++S + + L
Sbjct: 80  DQLIEVLEYAYEVFPDLERVTTYGSAYFIALKSLAELRRLQSAGLTRIHSGMESGDNEVL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
             + +     E + A  + +     +S   +  +     +        +       D + 
Sbjct: 140 EMINKGVTFEEIVEAGRMVKAADIELSEYYMVGVGGTELSQKHAINSARALNQIDPDFIR 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           L       GT  Y+ +K G+L L S + A+    +              IS+       S
Sbjct: 200 LRTFIPLSGTPMYQQYKTGELNLLSPHQALQETKMLIQNFKD-------ISSQLL----S 248

Query: 264 LHNLNYWR 271
            H  NYW 
Sbjct: 249 DHISNYWD 256


>gi|296132645|ref|YP_003639892.1| cobalamin B12-binding domain protein [Thermincola sp. JR]
 gi|296031223|gb|ADG81991.1| cobalamin B12-binding domain protein [Thermincola potens JR]
          Length = 1005

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    H+      +E   Q+F++E++ + +  G R I          +    +
Sbjct: 202 CPHRCSFCS--QHLFWRGTYRERSPQNFVSEVEVLYKQYGVRMIMLADEY----TTYNRR 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +      ++  ++E     V  + +    YR+AGV  + +GV+S+ + SL
Sbjct: 256 RWEQILDLLIEK---KMDLHFSMETRVEDVLRDRDILWKYRQAGVMHMYIGVESVFQSSL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +   A+ +  AI L            I    ++T    +  LQ+AL +  D     
Sbjct: 313 DRYNKGLEAANSREAIKLLDEAGIITECSFISGNLEETPDTMQQTLQKALEFNPDLAHFL 372

Query: 206 QLTIEKGTLFY 216
            +T    T  Y
Sbjct: 373 LITPWPYTPLY 383


>gi|288925016|ref|ZP_06418952.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
 gi|288338206|gb|EFC76556.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
          Length = 450

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 6/188 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +      L G R I       G       +
Sbjct: 164 CSYFCTYC---TIPYARGFSRNPSIASLVEQ-AREAALEGGREIVLTGVNIGDFGATTHE 219

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++  + +   +      ++E +  S E+  +    +A +    + +QS  ++ L+ 
Sbjct: 220 SFLDLVKALDEVEGIERFRISSLEPDLCSDELVEYCSISRAFMPHFHIPLQSGSDEVLKL 279

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I+L +   P   +  D++     +    +E       S  V  L ++
Sbjct: 280 MHRRYDRALFAHKINLIKEKMPDAFIGVDVMVGCRGEKPEYFEDCYDFLESLPVTQLHVF 339

Query: 206 QLTIEKGT 213
             +   GT
Sbjct: 340 PYSERPGT 347


>gi|163757349|ref|ZP_02164438.1| hypothetical protein HPDFL43_18102 [Hoeflea phototrophica DFL-43]
 gi|162284851|gb|EDQ35133.1| hypothetical protein HPDFL43_18102 [Hoeflea phototrophica DFL-43]
          Length = 455

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 73/203 (35%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTPSL 83
           C  +C +C            +   + + + +++ + +          + +  +G   P  
Sbjct: 144 CDHRCTFC---VIPYGRGNSRSVPMGAVVDQIRTLVENGYQEVVITGVDATSYGADLPGR 200

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                +A  IL+ I +   +  +   +IE     V+             +  + L +Q  
Sbjct: 201 PSLGTLARTILNQIPELQRLRLSSIDSIE-----VDDALMDLIADEPRFMPYLHLSLQHG 255

Query: 141 EEQSLRFLGRNHNASEAI---AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  L+ + R H+  +A+     +   R  F     DLI   P +T   +   L+   + 
Sbjct: 256 DDMILKRMKRRHSRDDAVSFCRTVRDLRPGFA-FGADLIAGFPTETEEMFARSLEIIEAC 314

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            +  L ++  +  +GT   +M +
Sbjct: 315 GISFLHVFPYSPREGTPAARMPQ 337


>gi|307297504|ref|ZP_07577310.1| Radical SAM domain protein [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916764|gb|EFN47146.1| Radical SAM domain protein [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 434

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 21/197 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC YC     +NS VRR  V    F+          + LT  + +S I F      +
Sbjct: 201 CPFKCTYCASSLLWNSFVRRDPVKTARFV----------KHLTASKGLSDIVFFDDA--I 248

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +       +++   +   + +   +    +   V+              I +G+++ +  
Sbjct: 249 LVGSGFKRLMEEF-ERVGIKARFHLPNGVHARFVDRETADLMYMNNFKTIRIGLETSDPA 307

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP---RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                G   N  +   AI            +S  ++  LP Q+       L+      + 
Sbjct: 308 MQNSTGGKVNLDDIFVAIENLSAAGFTSREISAYIMVNLPGQSEEDVLTSLRICEELRI- 366

Query: 201 HLSLYQLTIEKGTLFYK 217
             SL + T   GT+ +K
Sbjct: 367 SPSLNEFTPIPGTVQWK 383


>gi|291166609|gb|EFE28655.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Filifactor alocis ATCC
           35896]
          Length = 483

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 21/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     +  Y  G+E   +     +  +R L           G    S     
Sbjct: 194 CNNFCTYC-----IVPYTRGRERS-REPKDILDEIRFLANEGIKEITLLGQNVNSYGKTL 247

Query: 87  QNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +      D +     +     I  + ++P  +         +       + L +QS   +
Sbjct: 248 EQNYTFADLLRDVNDIDGIERIRFMSSHPKDLSDELIDAMAELPKVCESLHLPIQSGSTR 307

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R+++  +    +   R   P + F  D++   P +T   +   ++       D 
Sbjct: 308 LLKKMNRHYSKEDYYLLVDKLRAKIPNIGFTTDIMVGFPGETEEDFLETMEVVERVQYDS 367

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
              +  ++ KGT   KM                     Q +       A E  NH++ G 
Sbjct: 368 AFTFLYSVRKGTPAEKMEDQVP--------EEVKKERFQRLLEPVNRIAAE-KNHAYAGK 418


>gi|288931237|ref|YP_003435297.1| MiaB-like tRNA modifying enzyme [Ferroglobus placidus DSM 10642]
 gi|288893485|gb|ADC65022.1| MiaB-like tRNA modifying enzyme [Ferroglobus placidus DSM 10642]
          Length = 422

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 73/203 (35%), Gaps = 20/203 (9%)

Query: 32  CPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C YC   + + R ++     E  ++     ++   +     S  +  +G           
Sbjct: 149 CSYCA--TKIARGRLRSFSIEKIVEEVKKVVEMGYKEIQLTSQDTGAYG--------KDK 198

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEV---NNFQGYRKAGV-NRISLGVQSLEEQ 143
              + D + K   +  +  + +   NP        +  + ++   +   + L VQS + +
Sbjct: 199 GYRLPDLLEKISEIEGDFRVRVGMMNPQHAMEILDDLIEAFKSEKIYKFLHLPVQSGDNK 258

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H   +    +   R  F  +  S D+I   P ++   +E  ++       D 
Sbjct: 259 VLMDMRRGHTVEDFEEVVSAFRKAFDDVLLSTDVIVGFPTESEESFEKTVELIKRVKPDI 318

Query: 202 LSLYQLTIEKGTLFYKMHKDGDL 224
           +++ + +  +GTL  K+    D 
Sbjct: 319 VNITRFSPREGTLAAKLKDIPDW 341


>gi|309776932|ref|ZP_07671902.1| radical SAM domain protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915343|gb|EFP61113.1| radical SAM domain protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 557

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 18/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  +S  R+ ++   ++I   L +++          +  +     T +     
Sbjct: 183 CPYGCTYC-LSSADRKVRMFSMDYIMGILRQLK-------DSDVKQVKLLDRTFNSNPA- 233

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQSLEEQS 144
                L           +     E    ++     + + +       R  +GVQS   ++
Sbjct: 234 ---RALKIARYMNEHCLHQTFQFEIVAETLSEELLRFFCEEADTSRFRFEIGVQSFNTKT 290

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  +GR  N       I   +     M  DLI  LP + +  ++       S     + L
Sbjct: 291 LESVGRIQNNERLKEVIARLKASGCIMHVDLIAGLPYEDIASFQTSFDTLFSLQASEVQL 350

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             L + KGT   +  +                    +  +   +       H+
Sbjct: 351 GILKLLKGTELRRQKESYHF---IFQDTAPYDVTASAWLTKEEMKRIHTCAHA 400


>gi|225628132|ref|ZP_03786167.1| MiaB-like tRNA modifying enzyme [Brucella ceti str. Cudo]
 gi|237816294|ref|ZP_04595287.1| MiaB-like tRNA modifying enzyme [Brucella abortus str. 2308 A]
 gi|225616957|gb|EEH14004.1| MiaB-like tRNA modifying enzyme [Brucella ceti str. Cudo]
 gi|237788361|gb|EEP62576.1| MiaB-like tRNA modifying enzyme [Brucella abortus str. 2308 A]
          Length = 447

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 77/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 170 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 223

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  + +  +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 224 PGNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 278

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I     AR + P + F  D+I   P +T   ++  L+   
Sbjct: 279 QAGDDMILKRMKRRHLRDDSIRFCQTARALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 338

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 339 ECGLTHLHVFPYSPREGTPAARMPQ 363


>gi|163844167|ref|YP_001628572.1| RNA modification protein [Brucella suis ATCC 23445]
 gi|229890454|sp|B0CK00|MIAB_BRUSI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|163674890|gb|ABY39001.1| RNA modification enzyme, MiaB family [Brucella suis ATCC 23445]
          Length = 467

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +   + ++    +      +  +   G   +    +
Sbjct: 184 CDKFCTFC-----VVPYTRGSE--VSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGE 236

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                   +  +L  +A+   ++     T  ++P  ++ +    +R     +  + L VQ
Sbjct: 237 GEDGREWGLGELLFRLARIPGIARLRYTT--SHPRDMDDSLIAAHRDLRQLMPYLHLPVQ 294

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A E +  I   RN+ P   +S D I   P +T   +E  +Q    
Sbjct: 295 SGSDRILKAMNRRHKADEYLRLIERIRNVRPDMALSGDFIVGFPGETDQDFEDTMQLVRD 354

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 355 VNYAQAYSFKYSPRLGTP 372


>gi|218782779|ref|YP_002434097.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764163|gb|ACL06629.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 462

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 66/231 (28%), Gaps = 16/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    H    K  +    ++   E+  ++   G R I  +       S     
Sbjct: 204 CPYHCIFC----HNVFGKQFRARSPEAVTAEIAMLKDRYGVREIEILDDCFNL-SKTRAA 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +     N   S    +        ++   +  +++ GV R+S   +    +  + 
Sbjct: 259 AICESILDNRLNLDFS----LPNGVRGDVMDEELWDLFKEVGVFRVSFAPEVASPRMQKL 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N +  +   +I +A +         +   P +T  +  M    A    +       L
Sbjct: 315 VRKNADLDKMRQSIAMAADRGIVSMGFFMMGFPTETYEEMLMTADYAARSRLHFALFMYL 374

Query: 208 TIEKGTLFYKM-------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               GT   +M        +  D      N++                  Y
Sbjct: 375 NPFPGTEVARMAGTDAMDIRFKDYFHMPVNLSAATDEELHKANKFAYRKFY 425


>gi|157962954|ref|YP_001502988.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           pealeana ATCC 700345]
 gi|229890653|sp|A8H7B6|MIAB_SHEPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157847954|gb|ABV88453.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella pealeana ATCC
           700345]
          Length = 475

 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +     +     +     +P     +    Y      V+ + L VQS  + 
Sbjct: 213 DEICTFAELLRYVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDL 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P ++   +   ++       DH
Sbjct: 273 ILTQMKRGHMAIEYKSIIRRLRKARPDILISSDFIIGFPGESKQDFADTMKLIEDIQFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  +  L    E +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDNVSLDEKKERLAILQDRITQQAMRY 376


>gi|283856379|ref|YP_162708.2| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775378|gb|AAV89597.2| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 476

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 10/226 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C +   V  +K  +   ++  + E+++  +               T      +
Sbjct: 208 CKSHCSFCLWPQTVGGHK-YRTRSVEHVIEEIKYALKTFPQVKEFFFDDDTFTDDRPRAE 266

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++   +  E           +  +  G+  + +G +S  +Q L  
Sbjct: 267 AIARELGKLGVTWSCNAKANVPYET---------LKVLKDNGLRLLLVGYESGNQQILHN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +    I  LP +T    E  ++ A       + +   
Sbjct: 318 IKKGMRVETAEKFTRDCHDLGIAIHGTFILGLPGETRETIEQTIKWACEINPHTIQVSLA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               GTL YK   +   +  S    VD + +  +  S   L   EI
Sbjct: 378 APYPGTLLYKQAIENGWLDQSHAELVDEHGVQIAPLSYPHLSHEEI 423


>gi|154504378|ref|ZP_02041116.1| hypothetical protein RUMGNA_01882 [Ruminococcus gnavus ATCC 29149]
 gi|153795307|gb|EDN77727.1| hypothetical protein RUMGNA_01882 [Ruminococcus gnavus ATCC 29149]
          Length = 494

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 16/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ +  L     +  +  G        +L
Sbjct: 208 CNNFCSYC-----IVPYVRGRERS-RNPKDIIREIESLVADGVVEVMLLGQNVNSYGKTL 261

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP   A +L  I K   +       + ++P  +     +   ++      + L VQS  
Sbjct: 262 EEPMTFAQLLQEIEKIEGLERIRF--MTSHPKDLSDELIEVMAQSQKICKHLHLPVQSGS 319

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +  +   +   P +S   D+I   P +T   ++  L        
Sbjct: 320 TRILEKMNRRYTKEHYLGLVEKIKAAVPDISLTTDIIVGFPGETEEDFQETLDVVRKVRY 379

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 380 DSAFTFIYSKRTGTP 394


>gi|58039084|ref|YP_191048.1| putative methyltransferase [Gluconobacter oxydans 621H]
 gi|58001498|gb|AAW60392.1| Putative methyltransferase [Gluconobacter oxydans 621H]
          Length = 474

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C +   V   RY+      + + +   +               F    P    
Sbjct: 207 CKSRCTFCLWPQTVGGHRYRTRSPEHVAAEVRLAKQYFPEVQEFMFDDDTFTDDLP---R 263

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  +  +   W+ ++   +  E           +  ++ G+  + +G +S  +Q L
Sbjct: 264 AEAIAREMGKLGVTWSCNAKANVPYET---------LKVLKENGLRLLLVGYESGNQQIL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A         +  ++    I  LP +T    +  ++ A       L + 
Sbjct: 315 HNIKKGMRVETAKEFTRNCHKLGIKIHGTFIVGLPGETKETIQETIEFAKEINPHTLQVS 374

Query: 206 QLTIEKGTLFYKM 218
                 GT  +K 
Sbjct: 375 LAAPYPGTFLHKQ 387


>gi|291539696|emb|CBL12807.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis XB6B4]
          Length = 435

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 74/203 (36%), Gaps = 20/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTP--S 82
           C + C YC            +   ++  L E+  + +      + +   +   G     +
Sbjct: 154 CNQFCSYC---IIPFARGRVRSRKMEDVLNEINELAKSGYKEVVLTGIHLSSYGVDTGET 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L+       +++ + +   +      ++E  P  V  +  +   +         L +QS 
Sbjct: 211 LLS------LIEHVHEIEGIERIRLGSLE--PRIVTEDFAKRLSELTKICPHFHLSLQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R ++ +E  A   L R  F    ++ D+I   P +T  ++++  +      
Sbjct: 263 CDSVLKRMNRRYDTAEYEAGCDLLRKYFTHPAITTDVIVGFPGETEEEFKITEEYLKKIH 322

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
              + +++ ++ +GT    M   
Sbjct: 323 FYEMHIFKYSVREGTKAAVMPDQ 345


>gi|261822377|ref|YP_003260483.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pectobacterium wasabiae
           WPP163]
 gi|261606390|gb|ACX88876.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pectobacterium wasabiae
           WPP163]
          Length = 474

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 71/231 (30%), Gaps = 22/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G   +
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGE--T 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     +     +P     +  + Y      V+ + L VQS
Sbjct: 211 Y--DGEICSFAELLRLVAAIDGIDRVRFTTSHPIEFTDDIIRVYEDTPELVSFLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I    N      +S D I   P +T   +E  ++     
Sbjct: 269 GSDRVLTMMKRRHTALEYKAIIRKLHNARPGILISSDFIIGFPGETQADFEQTMKLIADV 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             D    +  +   GT    M       +P E     LY L + IT     
Sbjct: 329 NFDMSYSFVYSARPGTPAADMVD----DVPEEEKKQRLYLLQERITQQAMR 375


>gi|217076413|ref|YP_002334129.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thermosipho africanus
           TCF52B]
 gi|229891011|sp|B7IFC4|MIAB_THEAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|217036266|gb|ACJ74788.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thermosipho africanus
           TCF52B]
          Length = 429

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 81/224 (36%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C + C YC            +   +   L E++ +  L G R I+ +          L +
Sbjct: 146 CNRFCTYC---IVPYTRGREKSRKMDDILREVKNLS-LNGVREITYLGQNVDAYGKDLND 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
             ++A +L+   K   +       + + P+   ++  +     +     I L VQ    +
Sbjct: 202 GTSLAKLLNETKKIENIERIWF--LTSYPTDFSLDIAREIASSEKIAKSIHLPVQHGSNK 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +   E    I   R I P   +S D+I   P +T   ++  ++       + 
Sbjct: 260 ILKKMNRRYTIEEYYELIKSIREIVPDASISSDIIVGFPDETEDDFQQTVKLVEEIKFER 319

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L+L   +  +GT+ +K  +D             L NL + I   
Sbjct: 320 LNLAIYSPREGTIAWKYFEDNVPRAIKTRRMAYLLNLQKEINKM 363


>gi|294102421|ref|YP_003554279.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
           12261]
 gi|293617401|gb|ADE57555.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
           12261]
          Length = 434

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 22/246 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC                + S L E++ +        + + +  G         
Sbjct: 161 CNHFCSYC---VIPFVRGEPVSRPLNSVLEEVRSIADSGCTEVVLTGVHLGLYG--QFGE 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++  ++        V      ++E  P  +         +       + L +QS ++  
Sbjct: 216 VSLGELVRQAGAIPGVERIRFGSLE--PFGINDELLSALAETPQFCPHLHLPLQSGDDTV 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR---MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           L+ + R ++  E +A++  AR+       +S D++   P +    +   L      A   
Sbjct: 274 LQRMRRGYSPLEYMASVERARHYLGSRIHISTDVLVGFPGEDERAFANTLSFMKEVAFGK 333

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAY--EISNH 256
           + ++  +  +GT         D  LP   V   ++    + + +   +       EIS  
Sbjct: 334 VHVFPYSSREGT----RAASFDDHLPRHVVQERVHKVMEMGEQLFREYCSQWVGEEISVF 389

Query: 257 SFLGAE 262
               AE
Sbjct: 390 IEDAAE 395


>gi|156743179|ref|YP_001433308.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Roseiflexus
           castenholzii DSM 13941]
 gi|156234507|gb|ABU59290.1| RNA modification enzyme, MiaB family [Roseiflexus castenholzii DSM
           13941]
          Length = 480

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 81/228 (35%), Gaps = 21/228 (9%)

Query: 23  VHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----- 74
           VH P    C   C +C       R    +   +   + E + +    G + I+ +     
Sbjct: 162 VHVPIQYGCNMSCSFC---VIPLRRGRERSRPLAEIVEECRRIVAR-GAKEITLLGQIVD 217

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            +G   P      ++A +L  + +   +       + ++P+ +         +    +  
Sbjct: 218 SWGHDLP---GRPDLADLLRAVHEIPGLLRLRF--LTSHPAWMTDRLIAAVAELPRCMPD 272

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I+L VQ+ ++  L+ + R +        I   R+  P +S   D+I   P +T  ++E  
Sbjct: 273 INLPVQAGDDALLKIMRRGYTVQRYRELIAKIRDAIPHVSLTTDVIVGHPGETRERFEGT 332

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +       D + +   +   GT   +M  D  L +P     +    L
Sbjct: 333 KRLLDEIRFDKVHIAAFSPRPGTRAAEMELDPALAVPEGEKQLRRIEL 380


>gi|66576275|gb|AAM72550.2| BchE/P-methylase family protein [Chlorobium tepidum TLS]
          Length = 456

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 74/234 (31%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     K  +   I   L EM+  ++  G + +   F          P+
Sbjct: 194 CPVGCSFC--TTPTVYGKSFRYREIDLVLDEMRAHQERLGKKKVRFSFMDDNI--SFRPK 249

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+G+AK       V      + + ++         ++G   +S+G +SL    L+
Sbjct: 250 YFMELLEGMAKL-----GVRWNANISMNFLQKPEVAELAGRSGCELMSIGFESLNPDILK 304

Query: 147 FLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N  +   A+          +    I+     +   ++      +   ++     
Sbjct: 305 SMNKGSNRLQNYEAVVSNLHKHKIAIQGYFIFGFDDDSEKSFQATYDFIMQNRIEFPVFS 364

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
            LT   GT +++  KD       +      Y         + +         E+
Sbjct: 365 LLTPFPGTPYFEEMKDRVRHFDWDKYDTYHYMFEPKKLGGEKLLENFIKLQREV 418


>gi|150391027|ref|YP_001321076.1| radical SAM domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950889|gb|ABR49417.1| Radical SAM domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 440

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 33/258 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C YC+           ++ +   F +  +Q +  +   RSI S +F     +    
Sbjct: 171 CPYQCSYCN----------LKQIYFDEFRMRPIQEV--IEDIRSIKSKYFVFWDDNFFGD 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
              A IL    K        ++T+E      +    Q  R++G   + +G++S  E+SL+
Sbjct: 219 IKYAKILMKELKKLNKKWAAQVTLE---RCQDEELLQLARESGCMYLFIGLESFSEESLQ 275

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +   +  +    I L       +   +I+         ++  L+      +D +++ 
Sbjct: 276 GVNKGMNDVVKYKQIIDLIHTYGISVQAGIIFGFDYDKKDTFKKTLEACNDLGIDGVTVS 335

Query: 206 QLTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            LT    T  Y+                   +           + +   +     E  + 
Sbjct: 336 ILTPLPQTPLYQQFKTEGRLLSQDWRYYNGKTTVAYQPKNMTAKELYEGYMWFRKEFYSF 395

Query: 257 S---FLGAESL----HNL 267
                    S     HNL
Sbjct: 396 RSILKRMRRSRTNIIHNL 413


>gi|326203617|ref|ZP_08193481.1| MiaB-like tRNA modifying enzyme YliG [Clostridium papyrosolvens DSM
           2782]
 gi|325986437|gb|EGD47269.1| MiaB-like tRNA modifying enzyme YliG [Clostridium papyrosolvens DSM
           2782]
          Length = 446

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 15/207 (7%)

Query: 20  GVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIF 75
            VY+     C  +C YC            +   ++S + E + + Q      I       
Sbjct: 146 SVYLKISEGCDNRCTYC---IIPFLRGKYRSRKMESLVREAELLAQKGAKEIIIVAQDST 202

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
             G    L   + +  ++  I+    +       +   P  +     +   K       +
Sbjct: 203 RYGID--LYGKKMLPELIRNISDINGIEWIR--LLYCYPEEINDELIEEIAKNPKVCKYL 258

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            + +Q   ++ L+ +GR     +    ++  R     ++    LI   P +T   +E  +
Sbjct: 259 DIPIQHASDRVLKQMGRRGTICDIKQVLNKLREKVSGITIRTSLIVGFPGETEEDFEELI 318

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
                Y +D + ++  + E GT   K+
Sbjct: 319 AFLKEYRLDRVGVFTYSKEDGTAAAKL 345


>gi|226322668|ref|ZP_03798186.1| hypothetical protein COPCOM_00440 [Coprococcus comes ATCC 27758]
 gi|225209005|gb|EEG91359.1| hypothetical protein COPCOM_00440 [Coprococcus comes ATCC 27758]
          Length = 348

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 70/200 (35%), Gaps = 23/200 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N++ +RY++ ++  +       +            +    GG  + 
Sbjct: 65  YCKNDCYYCGIRKSNTNAKRYRLTEDEIMACCENGYEL--------GFRTFVLQGGEDAY 116

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  I + +      E  +  +       +++ +R+AG +R  L  ++  E+
Sbjct: 117 YTDDRMVAIIKKIKEAYP-----ECALTLSIGEKSYESYKRFREAGADRYLLRHETANEE 171

Query: 144 SLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             R L   H    ++A     ++  + +  ++   ++   P QT      +L        
Sbjct: 172 HYRKL---HPEKMSLAVRKNCLYDLKKLGYQVGAGMMVGSPYQTTEDLAEDLVFLKELQP 228

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           + + +        T F K  
Sbjct: 229 EMVGIGPFIPHHDTQFAKEP 248


>gi|154150044|ref|YP_001403662.1| MiaB-like tRNA modifying enzyme [Candidatus Methanoregula boonei
           6A8]
 gi|153998596|gb|ABS55019.1| MiaB-like tRNA modifying enzyme [Methanoregula boonei 6A8]
          Length = 430

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 34/213 (15%)

Query: 28  CVKKCPYC----------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C+ +C YC           F     R K+  E ++++   E+Q   Q             
Sbjct: 142 CLGRCTYCITRRARGPLRSFPVQEIRNKI--EEYVRAGAYEIQLTAQ------------- 186

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNR 132
               S         + D +    ++  N  + +     +  +        A         
Sbjct: 187 --DTSAWGRDTGQRLPDLLTALSSIPGNFRLRVGMMNPATTLGILDDLIDAFASDRLFRF 244

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L VQS  ++ L  +GR +   E    +   R  +P +S   D I   P +T   +   
Sbjct: 245 VHLPVQSGSDRILEQMGRGYTVREFEEIVSAFRGRYPDISIATDFIVGFPGETEEDFSRS 304

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           L+         +++ + +    T  ++     D
Sbjct: 305 LELIGRIRPAKVNVTRYSPRPFTGPFEEKDFPD 337


>gi|68171116|ref|ZP_00544525.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999441|gb|EAM86081.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Ehrlichia chaffeensis str. Sapulpa]
          Length = 442

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C K C +C                +++   E   +   +G + I+ I         +   
Sbjct: 157 CNKFCTFC---VVPYTRGEEYSRTVEAIFNE-ALVLSDSGVKEITLIGQNVNAYHGTYKG 212

Query: 86  PQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
            + ++  ++  +AK   +      T  ++P  +  + ++ +R     +  + L +QS  +
Sbjct: 213 CEWDLGKLIQYLAKIPNIERIRYTT--SHPRDMHQSLYEAHRSETKLMPFVHLPIQSGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R H A E I  I+  R   P +  S D I   P +T   +E  ++        
Sbjct: 271 RILKKMNRKHTAEEYIDIINNLRKQRPDIAFSSDFIVGFPGETEEDFEHTMKLVQEVNFS 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ +   GT   +        + S+ +      L +   + +
Sbjct: 331 QAYSFKYSPRPGTPSAEYPNQIPEEIKSQRIFRLQELLREQQLAFN 376


>gi|297171508|gb|ADI22507.1| Fe-S oxidoreductase [uncultured verrucomicrobium HF0500_08N17]
          Length = 492

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 16/201 (7%)

Query: 22  YVHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           YVH      C   C +C+  S         EN +  F   +Q          I    F  
Sbjct: 211 YVHILTARGCPYSCSFCNIPSIASYRTRSIENVVNEF-KYIQEELPYVNEIFIEDDTF-- 267

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGV 137
                  P N    L+   +   +   V+I    N       +     RKAG   + +G 
Sbjct: 268 -------PVNKNRTLELCERL--IDEKVKIRWSCNARVDTNPDVLGTMRKAGARLLCVGF 318

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S  + +L  + +  N ++    ++       +++   I  LP     + +  +  A   
Sbjct: 319 ESPNKSALDGVIKKTNKNKQEEFMNSCNKHDLKVNGCFIIGLPGDNDIKIDQTIDFAKKL 378

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             +    Y   +  GT  +K 
Sbjct: 379 MPNTAQFYPHMLYPGTGSFKW 399


>gi|269102017|ref|ZP_06154714.1| tRNA-i(6)A37 methylthiotransferase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161915|gb|EEZ40411.1| tRNA-i(6)A37 methylthiotransferase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 474

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 78/234 (33%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  +    G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGATYD 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E    A +L  +A    +      T  ++P     +  + Y+     V+ + L VQS  
Sbjct: 213 GEIATFAELLRLVAAIDGIDRIRYTT--SHPIEFTDDIIEVYQDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P ++   D I   P ++   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSKIRKLRKARPDITISSDFIVGFPGESDQDFQDTMKLIRDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT       D    L  E     LY L Q I S     + ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLTEEVKKERLYELQQQINSQAMRFSRQM 380


>gi|124384313|ref|YP_001028798.1| radical SAM domain-containing protein [Burkholderia mallei NCTC
           10229]
 gi|126441620|ref|YP_001059761.1| radical SAM domain-containing protein [Burkholderia pseudomallei
           668]
 gi|126452682|ref|YP_001067047.1| radical SAM domain-containing protein [Burkholderia pseudomallei
           1106a]
 gi|134277795|ref|ZP_01764510.1| radical SAM domain protein [Burkholderia pseudomallei 305]
 gi|167720509|ref|ZP_02403745.1| radical SAM domain protein [Burkholderia pseudomallei DM98]
 gi|167739502|ref|ZP_02412276.1| radical SAM domain protein [Burkholderia pseudomallei 14]
 gi|167903583|ref|ZP_02490788.1| radical SAM domain protein [Burkholderia pseudomallei NCTC 13177]
 gi|167911830|ref|ZP_02498921.1| radical SAM domain protein [Burkholderia pseudomallei 112]
 gi|167919830|ref|ZP_02506921.1| radical SAM domain protein [Burkholderia pseudomallei BCC215]
 gi|217420930|ref|ZP_03452435.1| radical SAM domain protein [Burkholderia pseudomallei 576]
 gi|226199995|ref|ZP_03795545.1| radical SAM domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|237813155|ref|YP_002897606.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia pseudomallei MSHR346]
 gi|242314748|ref|ZP_04813764.1| radical SAM domain protein [Burkholderia pseudomallei 1106b]
 gi|254178281|ref|ZP_04884936.1| radical SAM domain protein [Burkholderia mallei ATCC 10399]
 gi|254184244|ref|ZP_04890834.1| radical SAM domain protein [Burkholderia pseudomallei 1655]
 gi|254195761|ref|ZP_04902187.1| radical SAM domain protein [Burkholderia pseudomallei S13]
 gi|254199264|ref|ZP_04905630.1| radical SAM domain protein [Burkholderia mallei FMH]
 gi|254205573|ref|ZP_04911925.1| radical SAM domain protein [Burkholderia mallei JHU]
 gi|254260638|ref|ZP_04951692.1| radical SAM domain protein [Burkholderia pseudomallei 1710a]
 gi|254296905|ref|ZP_04964358.1| radical SAM domain protein [Burkholderia pseudomallei 406e]
 gi|254357738|ref|ZP_04974011.1| radical SAM domain protein [Burkholderia mallei 2002721280]
 gi|126221113|gb|ABN84619.1| radical SAM domain protein [Burkholderia pseudomallei 668]
 gi|126226324|gb|ABN89864.1| radical SAM domain protein [Burkholderia pseudomallei 1106a]
 gi|134251445|gb|EBA51524.1| radical SAM domain protein [Burkholderia pseudomallei 305]
 gi|147748860|gb|EDK55934.1| radical SAM domain protein [Burkholderia mallei FMH]
 gi|147753016|gb|EDK60081.1| radical SAM domain protein [Burkholderia mallei JHU]
 gi|148026865|gb|EDK84886.1| radical SAM domain protein [Burkholderia mallei 2002721280]
 gi|157807494|gb|EDO84664.1| radical SAM domain protein [Burkholderia pseudomallei 406e]
 gi|160699320|gb|EDP89290.1| radical SAM domain protein [Burkholderia mallei ATCC 10399]
 gi|169652506|gb|EDS85199.1| radical SAM domain protein [Burkholderia pseudomallei S13]
 gi|184214775|gb|EDU11818.1| radical SAM domain protein [Burkholderia pseudomallei 1655]
 gi|217396342|gb|EEC36359.1| radical SAM domain protein [Burkholderia pseudomallei 576]
 gi|225928051|gb|EEH24088.1| radical SAM domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|237503756|gb|ACQ96074.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia pseudomallei MSHR346]
 gi|242137987|gb|EES24389.1| radical SAM domain protein [Burkholderia pseudomallei 1106b]
 gi|254219327|gb|EET08711.1| radical SAM domain protein [Burkholderia pseudomallei 1710a]
          Length = 481

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + ++S L E++W+R       +  
Sbjct: 200 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VESVLAEVKWIRDNMP--EVKE 256

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 257 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 307

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  +
Sbjct: 308 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTI 367

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y  
Sbjct: 368 EYAKEINPHTIQVSLAAPYPGTRLYNQ 394


>gi|224538132|ref|ZP_03678671.1| hypothetical protein BACCELL_03023 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520260|gb|EEF89365.1| hypothetical protein BACCELL_03023 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 485

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 74/247 (29%), Gaps = 24/247 (9%)

Query: 28  CVKKCPYC---------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C  +C +C          F S      VG+  +I       Q ++++       +     
Sbjct: 218 CPFRCNFCVYPQTMHGHAFRSRSAENVVGEFEYIA---NNFQDVKEVVIEDDTFTANKKR 274

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
                     I  +L     N  +       +      ++    +  +KAG   I  G++
Sbjct: 275 VM-------EICRLLVEKGVNKRLKWLCNARV-----DLDYETMKAMKKAGCRLIIPGIE 322

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  +Q L  + +     +  + +  A+     +    +     +T       L+ AL   
Sbjct: 323 SGSQQILDNIKKGTKVEQFYSYVSNAKKAGLLIHACYMVGNNGETKETMNETLRLALKLN 382

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D    + L    GT  Y+  K    +  +            ++ S   L A E+     
Sbjct: 383 TDTAQFFPLIPYPGTEAYEWAKSNGYIETNYAKYCLPDGTHNTLLSLPELSADEMVAFCN 442

Query: 259 LGAESLH 265
           +  +  +
Sbjct: 443 MARKKYY 449


>gi|159897576|ref|YP_001543823.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|229890607|sp|A9AZY8|MIAB_HERA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|159890615|gb|ABX03695.1| RNA modification enzyme, MiaB family [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 438

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 86/234 (36%), Gaps = 23/234 (9%)

Query: 23  VHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----- 74
           VH P    C   C YC       R    +   ++    E++ +    G + I+ +     
Sbjct: 140 VHVPINYGCNMSCAYC---VIPLRRGKERSRPMEEIAEEVRRICAR-GAKEITLLGQIVD 195

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            +G   P      ++A +L+ + +   +       + ++P+ +         +    +  
Sbjct: 196 SYGHDLP---GRPDLADLLEYLHETPGLVRLRF--LTSHPAFMSEKLLHTIARLPKVMPD 250

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I+L +Q+ ++Q L+ + R +  ++    I   R I P +S   D+I   P +T   +E  
Sbjct: 251 INLPIQAGDDQLLKVMKRGYTVAKYTKLIERIREIIPNVSLSTDIIVGHPGETREMFERT 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           L+   +   D + +   +   GT    M  + D  L  E+       +      
Sbjct: 311 LEMVENIRFDKVHIAAYSSRPGTKAADM--ELDPALAVEHGEKQYRRIALERLQ 362


>gi|118475302|ref|YP_892512.1| hypothetical protein CFF8240_1371 [Campylobacter fetus subsp. fetus
           82-40]
 gi|238065315|sp|A0RQM9|RIMO_CAMFF RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|118414528|gb|ABK82948.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 436

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 85/226 (37%), Gaps = 21/226 (9%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           YL   +      GS S   Y+     C +KC +C   +   + K    N I      ++ 
Sbjct: 121 YLQKSDTKRVITGS-SYHAYIKIAEGCNQKCSFCAIPTFKGKLKSRDINSI------IKE 173

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEP----QNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           +++LT        F    T S +        +  ++D + K   V S   + +   P++ 
Sbjct: 174 VKELTKDGYSDFSFIAQDTSSFLRDAGINDGLIKLIDEVEKIEAVKSARILYL--YPTTA 231

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMS 172
            +        +   VN   + +Q + +  L+ + R  +     E +  + +A   F R  
Sbjct: 232 SMGLIDKIIASPKFVNYFDMPIQHINDDMLKIMRRGSSKERLKELLTKMRVAPKSFLRTG 291

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              I   P +T  +++        +  D +S +  + E+GTL Y+M
Sbjct: 292 I--IIGHPGETGERFDELCDFLTEFKFDRISAFAYSKEEGTLAYEM 335


>gi|313669088|ref|YP_004049372.1| hypothetical protein NLA_18110 [Neisseria lactamica ST-640]
 gi|313006550|emb|CBN88014.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 442

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE----ME 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I     I P +    D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLCAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|241761812|ref|ZP_04759898.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|260752571|ref|YP_003225464.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|241373726|gb|EER63286.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|258551934|gb|ACV74880.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 476

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 10/226 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C +   V  +K  +   ++  + E+++  +               T      +
Sbjct: 208 CKSHCSFCLWPQTVGGHK-YRTRSVEHVIEEIKYALKTFPQVKEFFFDDDTFTDDRPRAE 266

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++   +  E           +  +  G+  + +G +S  +Q L  
Sbjct: 267 AIARELGKLGVTWSCNAKANVPYET---------LKVLKDNGLRLLLVGYESGNQQILHN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +    I  LP +T    E  ++ A       + +   
Sbjct: 318 IKKGMRVETAEKFTRDCHDLGIAIHGTFILGLPGETRETIEQTIKWACEINPHTIQVSLA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               GTL YK   +   +  S    VD + +  +  S   L   EI
Sbjct: 378 APYPGTLLYKQAIENGWLDQSHAELVDEHGVQIAPLSYPHLSHEEI 423


>gi|254478015|ref|ZP_05091399.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214036019|gb|EEB76709.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 357

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N + +RY++ ++  ++        + +        ++    G    
Sbjct: 68  YCKNDCFYCGLRRSNQNAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 119

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  I +   V+    IT+     S +   ++ ++ AG +R  +  ++  E+
Sbjct: 120 YTKDRLCSIIKKIKRVVDVA----ITLSIGERSYDE--YKAFKDAGADRFLMRFETSNEK 173

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R      +    I  +   +N+   +    +  LP QT+     ++        D + 
Sbjct: 174 LYRKYHPGMSFENRIECLKWLKNLGYELGTGFLIGLPGQTLDDLAQDIILVKELDADMIG 233

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 234 IGPFIPHPQTPL 245


>gi|163753828|ref|ZP_02160951.1| Fe-S protein, radical SAM family [Kordia algicida OT-1]
 gi|161326042|gb|EDP97368.1| Fe-S protein, radical SAM family [Kordia algicida OT-1]
          Length = 461

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 74/221 (33%), Gaps = 11/221 (4%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CPY C + S     +  +    +    E++ +++   P SI  +       S+   + I 
Sbjct: 205 CPYTCKWCSTAVYGQSYRRRPPEMVAAELKMLKETYNPDSIWFVD---DVFSV-SHKWIE 260

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
              + + K     + +          +     Q  ++AG  RI +G +S  ++ +  + R
Sbjct: 261 KFHEEVIKQ---DAIIPFECITRAERLNDEILQLLKEAGCFRIWIGAESGSQKIIDAMDR 317

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
             +      AI     +       ++   P +     E  ++   +    H ++      
Sbjct: 318 RVDVDVVKTAIQKTNELGMETGTFIMVGYPGEDEQDIEETIEYLKAANPTHFTITVAYPI 377

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           KGT  Y   +D   + P  N + D        T  +    Y
Sbjct: 378 KGTSLYNEIEDKITIQPEWNTSTDRE---IDFTRTYSRKFY 415


>gi|88658201|ref|YP_507633.1| tRNA-i(6)A37 modification enzyme MiaB [Ehrlichia chaffeensis str.
           Arkansas]
 gi|123763750|sp|Q2GG00|MIAB_EHRCR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|88599658|gb|ABD45127.1| tRNA-i(6)A37 modification enzyme MiaB [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 442

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C K C +C                +++   E   +   +G + I+ I         +   
Sbjct: 157 CNKFCTFC---VVPYTRGEEYSRTVEAIFNE-ALVLSDSGVKEITLIGQNVNAYHGTYKG 212

Query: 86  PQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
            + ++  ++  +AK   +      T  ++P  +  + ++ +R     +  + L +QS  +
Sbjct: 213 CEWDLGKLIQYLAKIPNIERIRYTT--SHPRDMHQSLYEAHRSETKLMPFVHLPIQSGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R H A E I  I+  R   P +  S D I   P +T   +E  ++        
Sbjct: 271 RILKKMNRKHTAEEYIDIINNLRKQRPDIAFSSDFIVGFPGETEEDFEHTMKLVQEVNFS 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ +   GT   +        + S+ +      L +   + +
Sbjct: 331 QAYSFKYSPRPGTPSAEYPNQIPEEIKSQRIFRLQELLREQQLAFN 376


>gi|308274500|emb|CBX31099.1| hypothetical protein N47_E46110 [uncultured Desulfobacterium sp.]
          Length = 451

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 77/213 (36%), Gaps = 10/213 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC +   +      +     S + +++    L     +  IFF     +  +  
Sbjct: 189 CNHKCIYCSYP--LLEGAAVRLRDPASVVNDIE---SLINDHKVGYIFFTDSVFNDDDEA 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + ++ +   +N  +           P  ++  +    ++ G+  + +G  +  + +L+ 
Sbjct: 244 YLEVVSEMKNRNINIPWTAFF----KPEGLKDEHIALMKETGLKAVEIGADASTDTTLKR 299

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ- 206
           LG+     +      L        +   ++  P +T       L+   S       ++  
Sbjct: 300 LGKPFRFKDIALCNDLFARHQVATAHFYMFGCPGETRDTVIEGLENIKSLKNTVSFIFMG 359

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           + I   T+ +++  D  LVLP +++   +Y + 
Sbjct: 360 IRILPNTILHRIAVDEGLVLPDDSLLESIYYIA 392


>gi|307706881|ref|ZP_07643683.1| radical SAM superfamily protein [Streptococcus mitis SK321]
 gi|307617754|gb|EFN96919.1| radical SAM superfamily protein [Streptococcus mitis SK321]
          Length = 318

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYETTSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +++  +  + L+ 
Sbjct: 162 NRAHSYDLYVETVKRLRKYPKIEIVSHLINGLPGETHEMMLENVRRCVTHNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|255030880|ref|ZP_05302831.1| hypothetical protein LmonL_20371 [Listeria monocytogenes LO28]
          Length = 172

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 52/118 (44%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+QS  +++ R + R H+    +  +   +    R+   +I  LPK+T        +
Sbjct: 5   LELGLQSAHDETGRLINRAHDYDCYVEGVRKLQKHNIRICTHIINGLPKETPEMMMETTR 64

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + +   VD + ++ L + KGT   + +K GDL   + +  V+L      I     +  
Sbjct: 65  KVVESGVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIH 122


>gi|54310003|ref|YP_131023.1| putative 2-methylthioadenine synthetase [Photobacterium profundum
           SS9]
 gi|81398996|sp|Q6LNA5|MIAB_PHOPR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|46914442|emb|CAG21221.1| putative 2-methylthioadenine synthetase [Photobacterium profundum
           SS9]
          Length = 474

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 87/261 (33%), Gaps = 31/261 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                I   L E+  + +  G R ++ +      F G  P+
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPIDDVLYEVAQLAEQ-GVREVNLLGQNVNAFRG--PT 210

Query: 83  ----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
               +     +  ++  I     +         ++P     +  + Y      VN + L 
Sbjct: 211 HDGEMASFAELLRLVAAIDGIDRIRYTT-----SHPIEFTDDIIEVYTDTPELVNYLHLP 265

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L  + R H   E  + I   R + P ++   D I A P ++   ++  ++  
Sbjct: 266 VQSGSDRILTMMKRPHTVLEYKSKIRKLRKVRPDITMSSDFIVAFPGESDQDFQDTMKLI 325

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                D    +  +   GT       D    +  +     LY L Q I +    HA ++ 
Sbjct: 326 RDIDFDISYSFVFSPRPGTPAA----DYPCDISEKVKKERLYELQQQINTQAMRHARQML 381

Query: 255 N---HSFLGAESLHNLNYWRY 272
           N      +   S  N+   R 
Sbjct: 382 NTEQRILVEGPSRKNIMELRG 402


>gi|37679101|ref|NP_933710.1| 2-methylthioadenine synthetase [Vibrio vulnificus YJ016]
 gi|81758131|sp|Q7MN00|MIAB_VIBVY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|37197843|dbj|BAC93681.1| 2-methylthioadenine synthetase [Vibrio vulnificus YJ016]
          Length = 474

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 73/231 (31%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLYEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    L  E     LY L Q I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLSEETKKERLYELQQQINAQAMRYS 377


>gi|294678991|ref|YP_003579606.1| MiaB family RNA modification enzyme [Rhodobacter capsulatus SB
           1003]
 gi|294477811|gb|ADE87199.1| RNA modification enzyme, MiaB family [Rhodobacter capsulatus SB
           1003]
          Length = 419

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  +  G    + + +  ++ +++L   R  + +   G   +     
Sbjct: 149 CDHRCTFC-----IIPFGRGNSRSVPAGV-VVEQIKRLV-DRGFAEVVLTGVDLTSWGAD 201

Query: 88  N---------IALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRIS 134
                     +  IL  +     +  +   +IEA+ + +                +  + 
Sbjct: 202 LPGAPRMGDLVMRILRLVPDLARLRISSIDSIEADDNLMLAIATEPRL-------MPHLH 254

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +Q  ++  L+ + R H   +AIA    AR + P + F  D+I   P +T   +E  L+
Sbjct: 255 LSLQHGDDMILKRMKRRHLRDDAIAFCEEARRLRPGIVFGADIIAGFPTETEEMFENSLR 314

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                 +  L ++  +  KGT   +M +
Sbjct: 315 LVEDCGLTFLHVFPYSARKGTPAARMPR 342


>gi|86750971|ref|YP_487467.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris HaA2]
 gi|86573999|gb|ABD08556.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris HaA2]
          Length = 580

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 25  WP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P     C   C +C       ++K  ++  ++     +  +++L     +         
Sbjct: 214 IPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIQELVEKYQVGFFILADEE 267

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P++   + I    + IA+   ++  V+  I    + +  +    + Y +AG+  +SLG +
Sbjct: 268 PTINRKKFIQFCEELIAR--GLNKKVQWGINTRVTDILRDEQLLKFYNEAGLMHVSLGTE 325

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +  L    +    ++   AI L R          I  L  +T    E   + A+ + 
Sbjct: 326 AAAQLKLDLFNKETKIADNKKAIRLLREAGIVTEAQFIVGLDSETPETLEETYRMAMDWK 385

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D  +    T    T  +K
Sbjct: 386 PDLANWSMYTPWPFTPLFK 404


>gi|317047312|ref|YP_004114960.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pantoea sp. At-9b]
 gi|316948929|gb|ADU68404.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pantoea sp. At-9b]
          Length = 474

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 70/226 (30%), Gaps = 14/226 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +          L   Q   Q     ++          +  +  
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILLEIAQLAAQGVREVNLLGQNVNAYRGATFDGD 214

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
               A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 215 FCTFAELLRLVAAIDGIDRIRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGADR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILTLMKRAHTALEYKAIIRKLRVARPDIEISSDFIIGFPGETQQDFEQTMKLIGDINFDM 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +  +   GT    +       +P E     LY L   I     
Sbjct: 333 SFSFIYSARPGTPAADLPD----DVPEEEKKQRLYILQDRINQQAM 374


>gi|238762863|ref|ZP_04623831.1| hypothetical protein ykris0001_31730 [Yersinia kristensenii ATCC
           33638]
 gi|238698874|gb|EEP91623.1| hypothetical protein ykris0001_31730 [Yersinia kristensenii ATCC
           33638]
          Length = 361

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 8/222 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +              Q   Q     ++          +  + +
Sbjct: 44  CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGE 101

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I    + +     +     +     +P     +    YR     V+ + L VQS  ++ 
Sbjct: 102 -ICSFAELLRLVAAIDGIDRVRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRI 160

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D  
Sbjct: 161 LTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTMKLVADIRFDTS 220

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +  +   GT    +  +       + + +    +TQ    
Sbjct: 221 YSFIYSSRPGTPAADLPDNVSEEEKKQRLHILQERITQQAME 262


>gi|228922487|ref|ZP_04085789.1| hypothetical protein bthur0011_34740 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228940850|ref|ZP_04103410.1| hypothetical protein bthur0008_34910 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973771|ref|ZP_04134348.1| hypothetical protein bthur0003_35260 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980326|ref|ZP_04140637.1| hypothetical protein bthur0002_34950 [Bacillus thuringiensis Bt407]
 gi|228779431|gb|EEM27687.1| hypothetical protein bthur0002_34950 [Bacillus thuringiensis Bt407]
 gi|228785923|gb|EEM33925.1| hypothetical protein bthur0003_35260 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818864|gb|EEM64929.1| hypothetical protein bthur0008_34910 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228837201|gb|EEM82540.1| hypothetical protein bthur0011_34740 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|326941485|gb|AEA17381.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 509

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|153813388|ref|ZP_01966056.1| hypothetical protein RUMOBE_03807 [Ruminococcus obeum ATCC 29174]
 gi|149830565|gb|EDM85656.1| hypothetical protein RUMOBE_03807 [Ruminococcus obeum ATCC 29174]
          Length = 321

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ +++L        +  G        +L
Sbjct: 40  CNNFCSYC-----IVPYVRGRERS-REPEAIVKEVKRLVADGVSEVMLLGQNVNSYGKTL 93

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L+ +     +       + ++P  +     +   K+    + + L +QS  
Sbjct: 94  EHPVTFAQLLEMLEDVEGLKRIRF--MTSHPKDLSDELIETMAKSKKICHHLHLPLQSGS 151

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++  + +  +   R   P +S   D+I   P +T   +E  L        
Sbjct: 152 SRILKAMNRRYDKEKYLNLVDKIRTAIPDISLTTDIIVGFPGETEEDFEETLDVVSKCGY 211

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    +  +   GT   +M +   
Sbjct: 212 DTAFTFLYSRRSGTPAAEMEQIPQ 235


>gi|327400612|ref|YP_004341451.1| MiaB family RNA modification protein [Archaeoglobus veneficus SNP6]
 gi|327316120|gb|AEA46736.1| RNA modification enzyme, MiaB family [Archaeoglobus veneficus SNP6]
          Length = 417

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 24/209 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C   +   R ++     +  ++     ++         S  +  +G    + +
Sbjct: 142 CTGRCTFCA--TRFARGRLRSFSPDGIVEEIKKAVRAGYVEIQLTSQDTGAYGHDIGTNL 199

Query: 85  EP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGV 137
               + I+ I         +          NP     +       A         + L V
Sbjct: 200 PDLLEKISAIEGMFRVRVGM---------MNPRHA-YSMLDDLLNAFESEKIYKFLHLPV 249

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS +E+ LR +GR+H   E    +   R  F    +S D+I   P ++   +   L    
Sbjct: 250 QSGDEKVLRDMGRDHGVEEYEEVVSAFRKRFDDVMISTDIIVGFPTESEEAFYKSLDLVR 309

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
               D +++ + +  KGT  +++    D 
Sbjct: 310 RTRPDLVNVTRYSPRKGTPAFRLRDMPDW 338


>gi|300857316|ref|YP_003782300.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528]
 gi|300437431|gb|ADK17198.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528]
          Length = 310

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 69/214 (32%), Gaps = 15/214 (7%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C        +   +   I +    ++ M            +F   
Sbjct: 34  CPNRDGTISTGGCIFCS-EKGSGDFAGNRNVSISNQFQGIKQMMNKKWKDGKYIAYFQAY 92

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
           T +    + +    +       V   V + I   P  +  +  +   K        + LG
Sbjct: 93  TNTYAPVEILKQKYEEAINQEGV---VGLAIATRPDCLGDDVLELLEKFNNKIYTWVELG 149

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS ++ +   + R +       ++   R I   +   LI  LP +        ++   +
Sbjct: 150 LQSSDDFTAEKINRGYKLETFERSVKNLRKIGIEVVVHLIMGLPYENKDIMMNTVKYVST 209

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
             +  +  + L + + T   K++ +G L L S+ 
Sbjct: 210 QDIQGVKFHLLHLMEHTPLVKLYNEGQLKLMSQE 243


>gi|288905979|ref|YP_003431201.1| hypothetical protein GALLO_1788 [Streptococcus gallolyticus UCN34]
 gi|288732705|emb|CBI14279.1| conserved hypothetical protein, radical SAM motif [Streptococcus
           gallolyticus UCN34]
          Length = 313

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  +++ + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYIAELSDRMHVTVELGLQTTYDETSKII 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H     +  +   R + P++     LI  LP +T       ++R +    +D + L+
Sbjct: 160 NRAHTYDLYVETVKRLRQLAPKVEIVSHLINGLPGETHDMMIENVRRCVTDNEIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L      V++      I   H +  
Sbjct: 220 LLHLMASTKMQRDYHEGRLKLLGMEEYVNIICDQLEIIPKHIIIH 264


>gi|295836161|ref|ZP_06823094.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. SPB74]
 gi|197695257|gb|EDY42190.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. SPB74]
          Length = 513

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 69/222 (31%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 149 ESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 206

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L    +   +          +P     +
Sbjct: 207 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGRVEGLERVRF--TSPHPRDFTDD 264

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     +  I   R   P   +S D+I
Sbjct: 265 VIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSYRQDRYLGIIEKVRAAIPDAAISTDII 324

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 325 VGFPGETEEDFEQTLHVVREARFAAAFTFQYSKRPGTPAAEM 366


>gi|153939005|ref|YP_001392232.1| RNA modification protein [Clostridium botulinum F str. Langeland]
 gi|152934901|gb|ABS40399.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           Langeland]
 gi|295320230|gb|ADG00608.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           230613]
          Length = 432

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC   F       K  ++          +  +       +S I        L  
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPEKIM----EEVEKLSKHGFKEIILSGIDIASYGFDLEG 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
             N+  IL+ I +   +      +I  +P+             ++       L +QS   
Sbjct: 208 KYNLTSILEEIDRVEGIERIRIGSI--DPTFFTEEEIIRISKLKRF-CPHFHLSLQSGCN 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           ++L+ + R +   +    +H  R     +S   D+I   P +T  ++    +      + 
Sbjct: 265 ETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRDIKLS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            + +++ +  KGT   +M    D
Sbjct: 325 KMHVFKFSPRKGTRAEEMKNQVD 347


>gi|241662041|ref|YP_002980401.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ralstonia
           pickettii 12D]
 gi|240864068|gb|ACS61729.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ralstonia pickettii 12D]
          Length = 456

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F            Q         +++++     G  S
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFDDVLAEVAGLAEQGVREVTLLGQNVNAYIGKMGDTS 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P        + Y      V+ + L VQ  
Sbjct: 214 --ERADFALLLEYVAEIPGIERIRYTT--SHPKEFSSRLIEAYATNPKLVDHLHLPVQHG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  ++I   R I P +S   D I   P +T   +   +       
Sbjct: 270 SDRILMAMKRGYTVLEYKSSIRKLRAIRPNISIATDFIVGFPGETDADFAKTMDLIHEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    + 
Sbjct: 330 YDTSFSFIYSPRPGTPAANLP 350


>gi|157964955|ref|YP_001499779.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae
           MTU5]
 gi|229890633|sp|A8F2U6|MIAB_RICM5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157844731|gb|ABV85232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae
           MTU5]
          Length = 450

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G    + 
Sbjct: 163 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKGPADKIF 222

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLGVQSL 140
              ++   L  I     +       I+ N   +                +  + L VQS 
Sbjct: 223 SLADLLKHLAQIPNLERLRYITSHPIDMNDDLIKLHGTEPKL-------MPFLHLPVQSG 275

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R H+       I+  R   P +  S D I   P +T   +E  L       
Sbjct: 276 SNKILKAMNRKHDREYYFDIINRLREARPAIVLSSDFIVGFPGETDEDFEDTLDLVRRVK 335

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT            + SE + +    L     + +
Sbjct: 336 YGQCYSFKYSPRPGTPGATKTDQIPEHIKSERLTILQQELMAQQLAFN 383


>gi|320527362|ref|ZP_08028544.1| radical SAM protein family [Solobacterium moorei F0204]
 gi|320132219|gb|EFW24767.1| radical SAM protein family [Solobacterium moorei F0204]
          Length = 307

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 28/229 (12%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF  +    ++ +E  I               P+     +F   T +   
Sbjct: 43  CIFCGEGGSGDFTIYYEGKRLSREELI---------YNHQEIPKGNYIAYFQSFTNTYAP 93

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR------ISLGVQS 139
              +  I     ++   S    I+I   P  +  +     ++   N       + LG+Q+
Sbjct: 94  IAKLREIFTAALQDDLFSG---ISIATRPDCLGEDVISLLKELKANYPNKFIWVELGLQT 150

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + E + +++ R ++      A+   + I   +   +I  L  +        +Q   + ++
Sbjct: 151 IHESTAKWMNRGYSLEVFDEAVKNLKTINIDVIVHIIIGLLGEDRKMLLETIQHLNACSI 210

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           D + L  L   K T     +    L  PS+   +++    + +T     
Sbjct: 211 DGVKLQLLHYLKNTRLGVQY----LSNPSQYHVLEMDEYVELVTECIAY 255


>gi|310766988|gb|ADP11938.1| Putative tRNA-thiotransferase [Erwinia sp. Ejp617]
          Length = 480

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 12/229 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 163 CNKYCTFC--VVPYTRGEEVSRPADDVLFEVAQLAAQGVREVNLLGQNVNAYRGA-TY-- 217

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +    T+     I     +P     +  + YR     V+ + L VQS  +
Sbjct: 218 DGGICSFAELLRLVATIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGAD 277

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   LA     ++S D I   P +    +E  ++       D
Sbjct: 278 RILTLMKRAHTALEYKAIIRKLLAARPDIQISSDFIIGFPGENQADFEQTMKLVGEINFD 337

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
               +  +   GT    +  D       + + +    ++Q   +     
Sbjct: 338 TSYSFIYSARPGTPAADLPDDVSEEEKKQRLYILQDRISQQAMAWSRRK 386


>gi|298480727|ref|ZP_06998923.1| radical SAM domain protein [Bacteroides sp. D22]
 gi|298273161|gb|EFI14726.1| radical SAM domain protein [Bacteroides sp. D22]
          Length = 358

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 67/193 (34%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  +  + +   RQ       + +  GG  P  +   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLNLESILDCCRQGYKLGFRTFVLQGGEDP-ALTDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +  I +N+      +  I  +      + ++ + +AG NR  L  ++  E   R 
Sbjct: 117 RIEMTVARIRQNYP-----DCAITLSLGEKSRDAYERFFRAGANRYLLRHETYNESHYRQ 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +  + +  +   ++I  +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPAEMSGKQRLQCLADLKDIGYQTGTGIMVGSPGQTVEHIIEDILFIEKLQPEMIGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T F +  
Sbjct: 232 FLPHHDTPFAQYP 244


>gi|258591968|emb|CBE68273.1| tRNA 2-methylthioadenosine synthase-like protein [NC10 bacterium
           'Dutch sediment']
          Length = 447

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 65/202 (32%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----FGGGTPSL 83
           C  +C +C            +     + L +++ +     P  + +      +G    + 
Sbjct: 152 CSYRCTFC---IVPETRGPNRSQSTDAVLRDLRVLVDAGYPEVVLTGTHLGTYGRDLSTG 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
                +   +   A    +          +P  V       +   +     + L VQS +
Sbjct: 209 SSIAGLVADMLETAAPARLR-----LSSLDPHEVGEELIGCFGRFENLCRHLHLPVQSGD 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           E  L+ + R H A +    +       P ++   D+I   P +   ++E   +      +
Sbjct: 264 ETVLKRMRRPHTADDFRRLVERLAETVPGIAIGTDVIVGFPGEGDAEFEQTYRLLDRLPI 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
            +L ++  +  +GT+   M   
Sbjct: 324 AYLHVFNYSQRRGTVAAVMPNH 345


>gi|283479139|emb|CAY75055.1| UPF0004 protein PA3980 [Erwinia pyrifoliae DSM 12163]
          Length = 461

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 12/229 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 144 CNKYCTFC--VVPYTRGEEVSRPADDVLFEVAQLAAQGVREVNLLGQNVNAYRGA-TY-- 198

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +    T+     I     +P     +  + YR     V+ + L VQS  +
Sbjct: 199 DGGICSFAELLRLVATIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGAD 258

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   LA     ++S D I   P +    +E  ++       D
Sbjct: 259 RILTLMKRAHTALEYKAIIRKLLAARPDIQISSDFIIGFPGENQADFEQTMKLVGEINFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
               +  +   GT    +  D       + + +    ++Q   +     
Sbjct: 319 TSYSFIYSARPGTPAADLPDDVSEEEKKQRLYILQDRISQQAMAWSRRK 367


>gi|254787739|ref|YP_003075168.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Teredinibacter
           turnerae T7901]
 gi|237686553|gb|ACR13817.1| isopentenyl-adenosine A37 tRNA methylthiotransferase
           [Teredinibacter turnerae T7901]
          Length = 451

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 17/223 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C       R +                  Q  G R I+ +      + G  P 
Sbjct: 162 CSKYCTFC--VVPYTRGEEVSRPARDVLKECAHLAGQ--GVREINLLGQNVNAYRGDGPD 217

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                ++A ++  +AK   +      T  ++P     +    Y +    V+ + L VQS 
Sbjct: 218 --GVVDLAELITLVAKIDGIDRIRFTT--SHPVEFTDSLIDVYAEVPELVSHLHLPVQSG 273

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + +   R   P + F  D I   P +T   +E  ++      
Sbjct: 274 SDRILMAMKRGHTALEYKSKMRRIRQARPDICFSSDFIVGFPGETDADFEATMKLIADIG 333

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
            D    +  +   GT    M  D    +  + +A+    + Q 
Sbjct: 334 FDMSFSFIYSSRPGTPAADMKDDTPQEVKKQRLALLQQRINQQ 376


>gi|259909112|ref|YP_002649468.1| Putative tRNA-thiotransferase [Erwinia pyrifoliae Ep1/96]
 gi|224964734|emb|CAX56251.1| Putative tRNA-thiotransferase [Erwinia pyrifoliae Ep1/96]
          Length = 480

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 12/229 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 163 CNKYCTFC--VVPYTRGEEVSRPADDVLFEVAQLAAQGVREVNLLGQNVNAYRGA-TY-- 217

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +    T+     I     +P     +  + YR     V+ + L VQS  +
Sbjct: 218 DGGICSFAELLRLVATIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGAD 277

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   LA     ++S D I   P +    +E  ++       D
Sbjct: 278 RILTLMKRAHTALEYKAIIRKLLAARPDIQISSDFIIGFPGENQADFEQTMKLVGEINFD 337

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
               +  +   GT    +  D       + + +    ++Q   +     
Sbjct: 338 TSYSFIYSARPGTPAADLPDDVSEEEKKQRLYILQDRISQQAMAWSRRK 386


>gi|116753871|ref|YP_842989.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
 gi|116665322|gb|ABK14349.1| Radical SAM domain protein [Methanosaeta thermophila PT]
          Length = 430

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 72/192 (37%), Gaps = 14/192 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL------IE 85
           C +C       R    +   +++ + E++ +R++     +  +   GGT SL      ++
Sbjct: 165 CTFCQVPRFFGRN--IRSRSLENIVEEVRELRRMG----VKRVAVSGGTASLFGYRNALD 218

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
                 +L  ++      +      +     V+    +  R+  +  +  G++S  ++ L
Sbjct: 219 KDAFIRMLQELSGILGRKNLS--VPDMRVDLVDDEILEAIREYTIGWLFFGIESGSDRML 276

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + +     + I A+ LAR+   ++    I   P ++   +E  L       +D + + 
Sbjct: 277 KLMRKGVTVLDNIRAVELARSHGVKVGGSFIVGYPGESREDFEQTLDFMEEAMLDDVFVS 336

Query: 206 QLTIEKGTLFYK 217
                 GT   +
Sbjct: 337 IAEPIPGTPLAR 348


>gi|330996165|ref|ZP_08320055.1| iron-only hydrogenase maturation rSAM protein HydE [Paraprevotella
           xylaniphila YIT 11841]
 gi|329573669|gb|EGG55260.1| iron-only hydrogenase maturation rSAM protein HydE [Paraprevotella
           xylaniphila YIT 11841]
          Length = 382

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N    RY++ QE  +       +            +    GG  + 
Sbjct: 93  WCRNNCYYCGLRRSNRFASRYRLSQEQILDCCREGARL--------GFGTFVLQGGEDTE 144

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   I  ++  +   +         I  +    +   ++ +R AG  R  L  ++  E 
Sbjct: 145 QDDDWIEDLIGKLRMEFPR-----HAITLSVGERDGEVYRRWRDAGAGRYLLRHETRNEA 199

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  R  + +     +   + +  +    ++   P QT      ++        + +
Sbjct: 200 HYARLHPREMDGARRRECLRTLKALGYQTGAGMMVGTPGQTWDCLLDDIAFLEELEPEMI 259

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F +  
Sbjct: 260 GMGPFVPAAHTPFARHP 276


>gi|325660993|ref|ZP_08149620.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325472500|gb|EGC75711.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 440

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K C YC       +F S      V +   +       Q +++L      ++++     
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMEQLVHEAQELAE-----QGVKELILVAQETTLYGKD-- 206

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L   +++  +L  + K   +       +   P  +     Q  ++     + + L +Q
Sbjct: 207 --LYGEKSLHKLLKELCKIAGIRWIR--VLYCYPEEITDELIQVMKEESKICHYLDLPIQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ +GR  + ++ I  I   R   P ++    LI   P +T  Q E  +     
Sbjct: 263 HASDGILKRMGRRTSKAQLIEIIEKLRREIPDITLRTTLITGFPGETEEQHEELMDFVDQ 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              D L ++  + E+ T    M    +  +  E+   +L  L Q I
Sbjct: 323 MEFDRLGVFTYSPEEDTPAATMPDQIEESV-KEDRQAELMELQQDI 367


>gi|207743769|ref|YP_002260161.1| hypothetical protein RSIPO_01951 [Ralstonia solanacearum IPO1609]
 gi|206595168|emb|CAQ62095.1| hypothetical protein RSIPO_01951 [Ralstonia solanacearum IPO1609]
          Length = 74

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 15 GSNSLGVYVHWPFCVKKCPYCDFNSHVRRYK 45
           S  L +YVH P+CV++CPYCDF+SH    +
Sbjct: 41 ASPPLSLYVHVPWCVRQCPYCDFHSHAEPDQ 71


>gi|229111245|ref|ZP_04240799.1| hypothetical protein bcere0018_34910 [Bacillus cereus Rock1-15]
 gi|229129049|ref|ZP_04258022.1| hypothetical protein bcere0015_34940 [Bacillus cereus BDRD-Cer4]
 gi|229146344|ref|ZP_04274715.1| hypothetical protein bcere0012_34870 [Bacillus cereus BDRD-ST24]
 gi|296504271|ref|YP_003665971.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis BMB171]
 gi|228636977|gb|EEK93436.1| hypothetical protein bcere0012_34870 [Bacillus cereus BDRD-ST24]
 gi|228654286|gb|EEL10151.1| hypothetical protein bcere0015_34940 [Bacillus cereus BDRD-Cer4]
 gi|228672239|gb|EEL27529.1| hypothetical protein bcere0018_34910 [Bacillus cereus Rock1-15]
 gi|296325323|gb|ADH08251.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis BMB171]
          Length = 509

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|222098221|ref|YP_002532278.1| hypothetical protein BCQ_4563 [Bacillus cereus Q1]
 gi|221242279|gb|ACM14989.1| conserved hypothetical protein [Bacillus cereus Q1]
          Length = 319

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +    + +   
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHSKWKDGKCIAYFQAYTNTHAPLEVLKEK 113

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            + +     V   V ++I   P  +  +         K     + LG+Q++ E++   + 
Sbjct: 114 FEPLLAEKDV---VGLSIATRPDCLPDDVVAYLADLNKRTYLCVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|20807545|ref|NP_622716.1| biotin synthase [Thermoanaerobacter tengcongensis MB4]
 gi|20516079|gb|AAM24320.1| Biotin synthase and related enzymes [Thermoanaerobacter
           tengcongensis MB4]
          Length = 351

 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N + +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNQNAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  + +   V+    IT+     S +   ++ ++ AG +R  +  ++  E+
Sbjct: 114 YTKDRLCSIIKKMKRVVDVA----ITLSIGERSYDE--YKVFKDAGADRFLMRFETSNEK 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R      +    I  +   + +   +    +  LP QT+     ++        D + 
Sbjct: 168 LYRKYHPGMSFENRIECLKWLKKLGYELGTGFLIGLPGQTLDDLAQDIILVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|228959979|ref|ZP_04121644.1| hypothetical protein bthur0005_34510 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228799722|gb|EEM46674.1| hypothetical protein bthur0005_34510 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 509

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|183598131|ref|ZP_02959624.1| hypothetical protein PROSTU_01496 [Providencia stuartii ATCC 25827]
 gi|188020290|gb|EDU58330.1| hypothetical protein PROSTU_01496 [Providencia stuartii ATCC 25827]
          Length = 476

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 70/228 (30%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGATF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + I     +     I     +P     +  + Y      V+ + L VQS
Sbjct: 214 ---DGEICTFAELIRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYEDTPELVSFLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  ++     
Sbjct: 271 GSDRILTLMKRAHTALEYKAIIRKLRKARPDILISSDFIVGFPGETNDDFEKTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D    +  +   GT    +  D       + + +    + Q   S 
Sbjct: 331 NFDMSFSFIYSPRPGTPAADLPDDVSEDEKKQRLYLLQQRINQQAMSY 378


>gi|182418337|ref|ZP_02949632.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237666343|ref|ZP_04526328.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182377719|gb|EDT75263.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657542|gb|EEP55097.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 466

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC                 +  ++E++ + +      I S          +E  
Sbjct: 184 CNRFCAYC---LIPYTRGAVCSKDPEKVISEIKKLAEHGFKEIILSGIHTASYGVDLEGD 240

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL+ I K   +      +IE  P           +  +K    +  L +QS  + 
Sbjct: 241 VSLMTILEEIEKVDGIERVRIGSIE--PCFFTDSVIEKMKSMKKL-CPQFHLSLQSGCDA 297

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + A E   A++  R       ++ D+I   P +T  ++ +  +   +  +  
Sbjct: 298 TLKRMNRRYTAKEYEEAVYKIRKNLKDASITTDVIVGFPGETDEEFNLTYEYLKNLKLTK 357

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
             +++ +  KGT    M    D
Sbjct: 358 THIFKFSPRKGTKAATMDNQID 379


>gi|30021864|ref|NP_833495.1| tRNA 2-methylthioadenosine synthase [Bacillus cereus ATCC 14579]
 gi|81432671|sp|Q812Y0|MIAB_BACCR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|29897420|gb|AAP10696.1| tRNA 2-methylthioadenosine synthase [Bacillus cereus ATCC 14579]
          Length = 509

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|86136015|ref|ZP_01054594.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. MED193]
 gi|85826889|gb|EAQ47085.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. MED193]
          Length = 455

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K   +C F                  LTE + + +  G R I+ +      + G G  
Sbjct: 174 CDK---FCAFCVVPYTRGAEVSRPADRILTEARDLVER-GVREITLLGQNVNAYHGAGAN 229

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG---YRKAGVNRISLGVQ 138
             +    +   LD +     +         ++P+ +  +  +     +K  +  + L VQ
Sbjct: 230 GDLTLAQLIWELDKVDGLERIR-----FTTSHPNDMMDDLIEAHGTCKKL-MPYLHLPVQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           +  ++ L+ + R+H A   +  I   R   P   +S D I   P++T   ++  L     
Sbjct: 284 AGSDKILKRMNRSHTAESYLRLIERIRAARPDILISGDFIVGFPEETEEDFQATLDLVEE 343

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
                   ++ +   GT   +  +
Sbjct: 344 VKYGTAYSFKYSTRPGTPAAERPQ 367


>gi|53720004|ref|YP_108990.1| hypothetical protein BPSL2398 [Burkholderia pseudomallei K96243]
 gi|53725303|ref|YP_102369.1| radical SAM domain-containing protein [Burkholderia mallei ATCC
           23344]
 gi|67641777|ref|ZP_00440544.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia mallei GB8 horse 4]
 gi|76811229|ref|YP_334243.1| Fe-S oxidoreductase [Burkholderia pseudomallei 1710b]
 gi|167001080|ref|ZP_02266881.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia mallei PRL-20]
 gi|167816706|ref|ZP_02448386.1| radical SAM domain protein [Burkholderia pseudomallei 91]
 gi|167825111|ref|ZP_02456582.1| radical SAM domain protein [Burkholderia pseudomallei 9]
 gi|167846614|ref|ZP_02472122.1| radical SAM domain protein [Burkholderia pseudomallei B7210]
 gi|167895197|ref|ZP_02482599.1| radical SAM domain protein [Burkholderia pseudomallei 7894]
 gi|254191281|ref|ZP_04897785.1| radical SAM domain protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|262193273|ref|YP_001081291.2| radical SAM domain-containing protein [Burkholderia mallei NCTC
           10247]
 gi|52210418|emb|CAH36400.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52428726|gb|AAU49319.1| radical SAM domain protein [Burkholderia mallei ATCC 23344]
 gi|76580682|gb|ABA50157.1| Fe-S oxidoreductase [Burkholderia pseudomallei 1710b]
 gi|157938953|gb|EDO94623.1| radical SAM domain protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|238522759|gb|EEP86201.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia mallei GB8 horse 4]
 gi|243063034|gb|EES45220.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia mallei PRL-20]
 gi|261825981|gb|ABN01602.2| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia mallei NCTC 10229]
 gi|261835079|gb|ABO06508.2| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia mallei NCTC 10247]
          Length = 473

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + ++S L E++W+R       +  
Sbjct: 192 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VESVLAEVKWIRDNMP--EVKE 248

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 249 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 299

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  +
Sbjct: 300 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTI 359

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y  
Sbjct: 360 EYAKEINPHTIQVSLAAPYPGTRLYNQ 386


>gi|229151973|ref|ZP_04280169.1| hypothetical protein bcere0011_35140 [Bacillus cereus m1550]
 gi|228631528|gb|EEK88161.1| hypothetical protein bcere0011_35140 [Bacillus cereus m1550]
          Length = 509

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           IE   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 IE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|157803826|ref|YP_001492375.1| MiaB-like tRNA modifying enzyme [Rickettsia canadensis str. McKiel]
 gi|157785089|gb|ABV73590.1| MiaB-like tRNA modifying enzyme [Rickettsia canadensis str. McKiel]
          Length = 422

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 81/234 (34%), Gaps = 21/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--------GG 79
           C   C +C            +   I +   +++ +  L G + +               G
Sbjct: 143 CDHFCTFC---IIPYGRGKSRSVPIGAITEQVKHLM-LNGFKEVVFTGVDVTAYGSDLPG 198

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           +P+    Q I  +L+ + +   +  +     E +    E      Y +  +    + +Q+
Sbjct: 199 SPTF--AQMIKRVLNLVPELRRLRLSSIDVAEIDDELFE---LIAYSERIMPHFHISLQA 253

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H  +  I      R I P +SF  D+I   P +T   +E   +     
Sbjct: 254 GDDMILKRMKRRHKRTNVIEFCWKLRAIRPEVSFGADIIAGFPTETPEMFENTRKLISEA 313

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            + +L ++  +  +GT   +M +    +   +  A  L    Q+  +       
Sbjct: 314 ELQYLHVFPYSEREGTPAARMPQVPKPIR--KERAEILRQEGQNQLTEFFKKHI 365


>gi|49476310|ref|YP_034351.1| hypothetical protein BH16610 [Bartonella henselae str. Houston-1]
 gi|49239118|emb|CAF28422.1| hypothetical protein BH16610 [Bartonella henselae str. Houston-1]
          Length = 427

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 70/203 (34%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +    + ++ +++LTG      +  G    S    +
Sbjct: 150 CDHRCTFC-----IIPYGRGPSRSVP-MGSVIEQIKKLTGNGIQEVVLTGVDLTSYGHDL 203

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
             +  +  +   I  +      + ++   +    +          K  +  + L +Q+ +
Sbjct: 204 PGKATLGKLTSAILHHIPDLPRLRLS-SIDSIEADEELINLLAYEKRIMPHLHLSLQAGD 262

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H    AI       A+        DLI   P +T   ++  L       +
Sbjct: 263 NMILKRMKRRHLREHAIQFCQDLRAKRPTMVYGADLIAGFPTETEEMFQNSLSLVNDCHL 322

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
            HL ++  +  +GT   +M +  
Sbjct: 323 THLHVFPFSPREGTPAARMPQIN 345


>gi|329118626|ref|ZP_08247330.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327465361|gb|EGF11642.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 443

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   LTE+  + Q  G + I     ++    G    ++ 
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGA---MDD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I      +     +     +     +P        + YR     V+ + L +QS  ++
Sbjct: 213 GGICDFATLLRIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D 
Sbjct: 273 VLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDL 332

Query: 202 LSLYQLTIEKGTLFYKMH 219
             ++  +   GT    + 
Sbjct: 333 SFVFIYSPRPGTPAANLP 350


>gi|259415579|ref|ZP_05739500.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter sp.
           TrichCH4B]
 gi|259348809|gb|EEW60571.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter sp.
           TrichCH4B]
          Length = 440

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E + + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREAEDLVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  -LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
             +    +   LD +     +         ++P+ +  +  + +      +  + L VQ+
Sbjct: 215 GDMTLAQLIWELDKVEGLERIR-----FTTSHPNDMMDDLIEAHGTCAKLMPYLHLPVQA 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   I  I   R   P   +S D I   P++T   ++  L      
Sbjct: 270 GSDKILKRMNRSHTAESYIRLIERIRAARPDILISGDFIVGFPEETEEDFQATLDLVEEV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT   + 
Sbjct: 330 KYGTAYSFKYSTRPGTPAAER 350


>gi|20807803|ref|NP_622974.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
 gi|81481577|sp|Q8RA72|MIAB_THETN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|20516361|gb|AAM24578.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 471

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 64/204 (31%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +     +  +++L           G    S    +
Sbjct: 186 CNNFCTYC-----IVPYTRGREKS-RRPEDIIAEVKELAEKGYKEITLLGQNVNSY--GK 237

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++   ++     + ++    I     + ++P  +        R        + L VQ+  
Sbjct: 238 DLGGDINFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEHLHLPVQAGS 297

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  I   R   P ++   D+I   P +T   +   L        
Sbjct: 298 NKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDIIVGFPGETEEDFFQTLDLVERVRF 357

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    +  +   GT    M    D
Sbjct: 358 DGAYTFMYSKRAGTPAASMPDQVD 381


>gi|167619276|ref|ZP_02387907.1| radical SAM domain protein [Burkholderia thailandensis Bt4]
          Length = 481

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + ++S L E++W+R       +  
Sbjct: 200 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VESVLAEVKWIRDNMP--EVKE 256

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 257 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 307

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  +
Sbjct: 308 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTI 367

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y  
Sbjct: 368 EYAKEINPHTIQVSLAAPYPGTRLYNQ 394


>gi|307720461|ref|YP_003891601.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978554|gb|ADN08589.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfurimonas autotrophica
           DSM 16294]
          Length = 434

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 72/203 (35%), Gaps = 17/203 (8%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFF 76
           Y++    C K+C YC     V + +  + +     +          G + I     ++  
Sbjct: 143 YINISIGCDKQCTYC----IVPKTRGDEISIPDDLIINEAKRAVDNGAKEIFLLGQNVNN 198

Query: 77  GGGTPSLIEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            G   S  E +  N   +L  ++K   +          +P  ++    + + K       
Sbjct: 199 YGRRFSSSEHEKVNFTELLRRLSKIEGLERIRF--TSPHPFHMDDEFIEEFAKNPKICKS 256

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + + +QS   + L+ + R +     +  +   R++ P +S   D+I A P ++   +   
Sbjct: 257 MHMPLQSGSSKVLKEMKRGYTKEWFLNRVQKLRSVCPDVSISTDIIVAFPGESDEDFADT 316

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
           +        D +  ++ +    T
Sbjct: 317 IDVMKQVKFDQIFSFKYSPRPET 339


>gi|294496416|ref|YP_003542909.1| radical SAM protein [Methanohalophilus mahii DSM 5219]
 gi|292667415|gb|ADE37264.1| Radical SAM domain protein [Methanohalophilus mahii DSM 5219]
          Length = 367

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 68/204 (33%), Gaps = 22/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC           G +   +S  + +++ R     R  SS  F  G        
Sbjct: 150 CPWNCKYC-----QTPRLFGHKMRHRSIDSIVRYARCYNDLRFTSSNAFAYGG------D 198

Query: 88  NIALILDGIAKNWTVSSNVE--------ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQ 138
            I   LD + K     +  E           E  P  V  +  +   K   N+ ISLG Q
Sbjct: 199 GIHPRLDKVEKLLACLAKFEGKNIYFGTFPSEVRPEFVSEDALELVNKYCTNKSISLGGQ 258

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA--LS 196
           S  ++ LR + R H++ +   A+    +       D I+  P +T     M L     + 
Sbjct: 259 SGSDRILRQIRRGHSSEDISHAVEHCVDKAIVPMVDFIFGFPGETEEDQRMTLDMINWII 318

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
                +  + LT    T +  M  
Sbjct: 319 SKGGKVRAHYLTPLPSTPYENMVP 342


>gi|85706420|ref|ZP_01037514.1| Magnesium-protoporphyrin IX monomethylester oxidative cyclase,
           66kDa subunit (bchE) [Roseovarius sp. 217]
 gi|85669193|gb|EAQ24060.1| Magnesium-protoporphyrin IX monomethylester oxidative cyclase,
           66kDa subunit (bchE) [Roseovarius sp. 217]
          Length = 553

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 28/271 (10%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  ++     +  +  L    
Sbjct: 186 YIYVPLGKRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIENLVNNH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++ + + +    + IA++        I         + +  + YRKAG
Sbjct: 240 GVGFFILADEEPTINKKKFVQFCEELIARDLPRRVQWGINTRVTDIYRDRDLLKFYRKAG 299

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  +  L    +    ++   AI L R          I  L  +T    E 
Sbjct: 300 LVHVSLGTEAAAQLKLDQFNKETTVAQNKKAIQLLREADIFTEAQFIVGLDNETPETLEE 359

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             Q A  +  D  +    T    T  ++     +L    E      YN    I     + 
Sbjct: 360 TFQMAWDWQPDLANWAMYTPWPFTPLFQ-----ELRDQVEVFDFSKYNFVTPIMKPAAMT 414

Query: 250 AYE-----ISNHSFLGAESLHNLNYWRYGDY 275
             E     + N+             WR   Y
Sbjct: 415 RGELLDGVMKNYRRFYMRKALFHYPWRGTGY 445


>gi|218661968|ref|ZP_03517898.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli IE4771]
          Length = 473

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 82/241 (34%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L   + +  I      P+     
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRSPELFA------REIARLYREQGVELINLADENPTSSRKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   IA+N  V    +I        +  + +    YRKAGV R  LG+++ +E +L
Sbjct: 257 WLAFLEAMIAENVPV----QIVGSTRADDIVRDADILHLYRKAGVVRWLLGMENTDEATL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++ ++      ++ LSY  D +   
Sbjct: 313 ALIKKGGAKATDREAIRLLRRHDILSMATWVVGFEEEKLSDLWRGFRQLLSYDPDQIQAL 372

Query: 206 QLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +T  + T F+     +   + D+        V        +     +   E++  +   
Sbjct: 373 YVTPHRWTPFFRIARDRQVIEADIRKWDYKHQVLKMRYLHPLVLIACVKLIEVAVQARPK 432

Query: 261 A 261
           A
Sbjct: 433 A 433


>gi|168704786|ref|ZP_02737063.1| hypothetical protein GobsU_34937 [Gemmata obscuriglobus UQM 2246]
          Length = 467

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 76/220 (34%), Gaps = 18/220 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       ++              ++  R+L     +  +       +     
Sbjct: 177 CDRLCTYCAIPKMRGKHVTKP------IEEVIREARELAAD-GVRELIIVAQDTTYYGMD 229

Query: 88  NIALI-LDGIAKNWTVSSNVEI--TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 L  + +      N+E   T+ A P  +     + +  +   +  + + +Q + +
Sbjct: 230 LYGRTRLAELLRELDKVENIEWIRTLYAYPEHISDELIETFAGSKKIIPYLDMPLQHISD 289

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R  + +     ++  R  +P ++     I   P +T  ++E        +  +
Sbjct: 290 RVLKRMIRRVDRAATEKLLYRLREKWPDLAIRTTFITGFPGETDAEFEELRDFVAQFKFE 349

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            + ++  ++E GT   K+    D  LP +     +  + +
Sbjct: 350 RVGVFPYSLEPGTPAEKL----DGHLPEDVKQARVNAIME 385


>gi|167465242|ref|ZP_02330331.1| tRNA 2-methylthioadenosine synthase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 376

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 73/219 (33%), Gaps = 12/219 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R K              +  RQ     ++   ++   G     IE
Sbjct: 87  CDKFCTYC--IVPYTRGKERSRRPQDVIQEVRELARQGFKEITLLGQNVNVYGKDFDDIE 144

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 ++D I K   +         ++P   +    +   K G  +  I L VQS   +
Sbjct: 145 -YTFGDLMDDIRK---IDIPRVRFTTSHPRDFDDRLIEVLAKKGNLMEHIHLPVQSGNTE 200

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   +   P   ++ D+I   P +T  Q+E  L        D 
Sbjct: 201 ILKKMSRKYTRERYLELVGKIKEAIPDAVLTTDIIVGFPGETDEQFEDTLSLVKEVKYDS 260

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +  +  +GT    M  +  + +  E +A     L +
Sbjct: 261 AFTFIYSPREGTPAASMEDNIPMEVKKERLARLNEVLAE 299


>gi|116250210|ref|YP_766048.1| vitamin B12 binding methyltransferase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115254858|emb|CAK05932.1| putative vitamin B12 binding methyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 509

 Score = 63.0 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 115/352 (32%), Gaps = 55/352 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L     +  I      P+     
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRSPELFA------REIARLYREEGVELINLADENPTSSRKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   I +N  V    +I        +  + +    YRKAGV R  +G+++ +E +L
Sbjct: 257 WLAFLEAMIIENVPV----QIVGSTRADDIVRDADILHLYRKAGVVRWLIGMENTDEATL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++T++      ++ LSY  D +   
Sbjct: 313 TLIKKGGAKATDREAIRLLRQHDILSMATWVVGFEEETLSHLLRGFRQLLSYDPDQIQAL 372

Query: 206 QLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +T  + T F+     +   + D+        V        I     +   E++  +   
Sbjct: 373 YVTPHRWTPFFRIARDRQVIETDIRKWDYKHQVLKMRHLNPIVLVACVKLIEVAVQARPK 432

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEF 320
           A                              R+    ++     ++   + G  V   E 
Sbjct: 433 A----------------------------LLRILFHRDREQRHSMRWYTQMGRRVWFHEI 464

Query: 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQ 372
           L       EFL     L++G +++++    G   D E E  L+ Q +++ + 
Sbjct: 465 L-------EFLFRRRHLKDGPTLENF---WGAPQDSEEESMLRPQRYVKSLD 506


>gi|295110328|emb|CBL24281.1| iron-only hydrogenase maturation protein HydE [Ruminococcus obeum
           A2-162]
          Length = 346

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 17/198 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     + +  +    M    +       + +  GG  P     
Sbjct: 61  YCKNDCFYCG----IRRSNREAQRYRLTEEDIMTCCAEGYELGFRTFVLQGGEDP-FFTD 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  ++  I K +      +  +  +       +++ +R+AG +R  L  ++ + +  R
Sbjct: 116 EKIVHLIQEIKKKYP-----DCALTLSIGEKSEESYRAFREAGADRYLLRHETADPRHYR 170

Query: 147 FLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              R H    +       +   + +  +     +   P QT+     +         + +
Sbjct: 171 ---RLHPYEMSCEHRKNCLRTLKKLGFQTGAGFMVGSPLQTIDDLVEDFLFLKDLDPEMV 227

Query: 203 SLYQLTIEKGTLFYKMHK 220
            +      K T F +  +
Sbjct: 228 GIGPFIPHKDTPFAEERR 245


>gi|316935161|ref|YP_004110143.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris DX-1]
 gi|315602875|gb|ADU45410.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris DX-1]
          Length = 565

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 25  WP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P     C   C +C       ++K  ++  ++     +  +++L     +         
Sbjct: 201 IPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIQELVEKYDVGFFILADEE 254

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P++   + I    + IA+   ++  V+  I    + +  +    + Y +AG+  +SLG +
Sbjct: 255 PTINRKKFIQFCEELIAR--GLNKKVQWGINTRVTDILRDEQLLKFYNEAGLMHVSLGTE 312

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +  L    +    ++   AI L R          I  L  +T    E   + A+ + 
Sbjct: 313 AAAQLKLDLFNKETKIADNKKAIRLLREAGIVTEAQFIVGLDSETPETLEETYRMAMDWK 372

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D  +    T    T  +K
Sbjct: 373 PDLANWSMYTPWPFTPLFK 391


>gi|289191637|ref|YP_003457578.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288938087|gb|ADC68842.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 500

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 12/195 (6%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGG----TPSLIEP 86
           C F S    +   +    +  L E++ + +    R +      + +  G     P+  EP
Sbjct: 216 CGFCSVPSVFGYARSRDEEDILKEVESLLEEGVKRIVLSAPDFLDYERGERLINPNFPEP 275

Query: 87  --QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + I  +L          +   +      +  +    + + K     I +G +S +++ 
Sbjct: 276 NYEAIESLLSNCKDLADKYNANILIENIKANLFDERVAEIFSKYLKTPIYIGCESGDKEH 335

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--DHL 202
            R LGR     + + A+ +A+    +    LIY LP +     +  +          D +
Sbjct: 336 CRLLGRPATPDDVLKAVKIAKKYNLKAQVYLIYGLPGENKDTAKNTVNFMHKIKPYIDKI 395

Query: 203 SLYQLTIEKGTLFYK 217
           ++Y+      + F  
Sbjct: 396 TVYKFRPLPMSAFQN 410


>gi|291536277|emb|CBL09389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           M50/1]
          Length = 496

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 77/222 (34%), Gaps = 20/222 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     ++ + +L     +  +  G    S    +
Sbjct: 215 CNNFCSYC-----IVPYVRGRERS-REPKEIIREIERLAADGVVEIMLLGQNVNSYGKNL 268

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I K   +       + ++P  +  +  +  + +      + L +QS  
Sbjct: 269 EQPMTFAQLLQEIEKVDGIERIRF--MTSHPKDLSDDLIEVMKNSKKICKHLHLPLQSGS 326

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++    +  +   R   P ++   D+I   P +T   +E  +        
Sbjct: 327 SRILKLMNRRYDKEHYLELVDKIRAAVPDIALTTDIIVGFPGETEEDFEETMDVVRKVRY 386

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           D    +  +   GT    M    +  +P + +      L + 
Sbjct: 387 DSAFTFIYSKRTGTPAAVM----ENQIPEDVIKARFDRLLKE 424


>gi|269119722|ref|YP_003307899.1| radical SAM protein [Sebaldella termitidis ATCC 33386]
 gi|268613600|gb|ACZ07968.1| Radical SAM domain protein [Sebaldella termitidis ATCC 33386]
          Length = 364

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 73/205 (35%), Gaps = 19/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CVK C YC     +R      E F  S    ++  +               G+ +L   +
Sbjct: 59  CVKNCYYCG----IRSGNENVERFDMSGDEIIKMAKWAYENN--------YGSVTLQSGE 106

Query: 88  NIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                 +   K+  +     S+ ++ +         + ++ + +AG +R  L +++  E+
Sbjct: 107 RQDKNFEKFVKDMILDIKKVSDGKLGLTLCLGEQTEDIYREWFEAGGHRYLLRIETTNEE 166

Query: 144 SLRFL---GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             + +      H+  + +  +   + I  ++   ++  LP QT      ++       +D
Sbjct: 167 LYKVIHPDNNIHSFQKRVDCLKTLKKIGYQVGTGVMIGLPGQTEEDLVNDILFFEEMDID 226

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV 225
            + +    + K T   K   + DL 
Sbjct: 227 MIGMGPYVVHKDTPLGKDVINNDLN 251


>gi|228993500|ref|ZP_04153409.1| hypothetical protein bpmyx0001_42270 [Bacillus pseudomycoides DSM
           12442]
 gi|228766215|gb|EEM14860.1| hypothetical protein bpmyx0001_42270 [Bacillus pseudomycoides DSM
           12442]
          Length = 319

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 62/195 (31%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVVTQYHEMKEKMHSKWKDGKCIAYFQAYTNT---HAPLEML 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +            K     + LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    ++   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|329115082|ref|ZP_08243837.1| Putative methyltransferase [Acetobacter pomorum DM001]
 gi|326695525|gb|EGE47211.1| Putative methyltransferase [Acetobacter pomorum DM001]
          Length = 476

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  ++  +    Q    E++  +Q               T  L   +
Sbjct: 208 CKSRCTFCLWPQTVGGHR-YRTRSPQHVAAEIRLAKQYFPQVKEFFFDDDTFTDDLPRAE 266

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  R  G+  + +G +S  +Q L  
Sbjct: 267 AIARELGKLGVTWSCNAKA---------NVPRETLKVLRDNGLRLLLVGYESGNQQILHN 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T    +  ++ A       L +   
Sbjct: 318 IKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFAQEINPHTLQVSLA 377

Query: 208 TIEKGTLFYKM 218
               GT  +K 
Sbjct: 378 APYPGTALHKQ 388


>gi|288941659|ref|YP_003443899.1| radical SAM domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288897031|gb|ADC62867.1| Radical SAM domain protein [Allochromatium vinosum DSM 180]
          Length = 482

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 76/230 (33%), Gaps = 10/230 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S     +  +     + + E+Q   +  G R    +         +  +
Sbjct: 222 CPFSCSFCS--SIEVNGRGYRRRSANAVVDEIQLHVEQFGHRYFGFVD----DNLTVSKR 275

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL-R 146
           +I  I++ I +   +    E     + ++++        +AG     + ++   E+   +
Sbjct: 276 HILAIMNEIVRR-DLDIQFESFSGYHIATLDEEVITALVEAGCIYTLMPIEHGNERMRNQ 334

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +G+     +    +   R     +    I   P+ T       L+      VD + ++ 
Sbjct: 335 IIGKKLPTEKIYEVVENYRKFEVLIRAVFIMGFPEDTHDTLRDTLEMIQRLQVDLVDVFT 394

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDL--YNLTQSITSAHGLHAYEIS 254
           L    GT  ++     DL +   +       +    + +S   L  Y +S
Sbjct: 395 LIPYPGTKVFEQAMRDDLFINKIDQKELWSGHYTLNNQSSTFYLKPYSLS 444


>gi|228999536|ref|ZP_04159114.1| hypothetical protein bmyco0003_40910 [Bacillus mycoides Rock3-17]
 gi|229007094|ref|ZP_04164720.1| hypothetical protein bmyco0002_39930 [Bacillus mycoides Rock1-4]
 gi|228754139|gb|EEM03558.1| hypothetical protein bmyco0002_39930 [Bacillus mycoides Rock1-4]
 gi|228760247|gb|EEM09215.1| hypothetical protein bmyco0003_40910 [Bacillus mycoides Rock3-17]
          Length = 319

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVVTQYHEMKEKMHSKWKDGKCIAYFQAYTNT---HAPLEML 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +            K     I LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTYLWIELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    ++   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|229048452|ref|ZP_04194018.1| hypothetical protein bcere0027_44180 [Bacillus cereus AH676]
 gi|229147319|ref|ZP_04275669.1| hypothetical protein bcere0012_44500 [Bacillus cereus BDRD-ST24]
 gi|228636151|gb|EEK92631.1| hypothetical protein bcere0012_44500 [Bacillus cereus BDRD-ST24]
 gi|228722913|gb|EEL74292.1| hypothetical protein bcere0027_44180 [Bacillus cereus AH676]
          Length = 319

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLVEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|161869349|ref|YP_001598516.1| hypothetical protein NMCC_0355 [Neisseria meningitidis 053442]
 gi|229890574|sp|A9M1G4|MIAB_NEIM0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|161594902|gb|ABX72562.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Neisseria meningitidis 053442]
          Length = 442

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL----IEP 86
           C  YC F              +   LTE+  + Q      +  I   G   +     ++ 
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQG----VKEINLLGQNVNAYCGEMDD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I      +     +     +     +P     +  + YR     V+ + L +QS  ++
Sbjct: 213 GEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D 
Sbjct: 273 VLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDL 332

Query: 202 LSLYQLTIEKGTLFYKMH 219
             ++  +   GT    +H
Sbjct: 333 SFVFIYSPRPGTPAANLH 350


>gi|319780719|ref|YP_004140195.1| MiaB-like tRNA modifying enzyme [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166607|gb|ADV10145.1| MiaB-like tRNA modifying enzyme [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 437

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 73/201 (36%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      ++ +++L G      +  G    S    +
Sbjct: 160 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVEQVKRLAGNGYAEIVLTGVDMTSFGADL 213

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I K       + ++   +    + +           +  + L +QS +
Sbjct: 214 PGAPKLGKLVKTILKQVPDVKRLRLS-SIDSIEADDDLLDAIATEPRLMPHLHLSLQSGD 272

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   ++I      R + P + F  D+I   P +T   +E   +      +
Sbjct: 273 DMILKRMKRRHLRDQSIRFCEDVRKLRPGIVFGADIIAGFPTETDEMFENSEKIVEECGL 332

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +  +GT   +M +
Sbjct: 333 THLHVFPFSPREGTPAARMPQ 353


>gi|240145918|ref|ZP_04744519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           L1-82]
 gi|257201983|gb|EEV00268.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           L1-82]
          Length = 435

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 75/203 (36%), Gaps = 20/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTP--S 82
           C + C YC            +   ++  L E++ + +      + +   +   G     +
Sbjct: 154 CNQFCSYC---IIPFARGRVRSRKMEDVLNEIKGLAKSGYKEVVLTGIHLSSYGVDTGET 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L+       +++ + +   +      ++E  P  V  +  +   +         L +QS 
Sbjct: 211 LLS------LIEHVHEIEGIERIRLGSLE--PRIVTEDFAKRLSELTKICPHFHLSLQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R ++ +E  A   L R  F    ++ D+I   P +T  ++++  +      
Sbjct: 263 CDSVLKRMNRRYDTAEYEAGCDLLRKYFTHPAITTDVIVGFPGETEEEFKITEEYLKKIH 322

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
              + +++ ++ +GT    M   
Sbjct: 323 FYEMHIFKYSMREGTKAAVMPDQ 345


>gi|91204449|emb|CAJ70949.1| hypothetical protein kustb0204 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 480

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 70/220 (31%), Gaps = 10/220 (4%)

Query: 28  CVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC  F +        +    ++ + E++ M+         +          ++ 
Sbjct: 212 CPYSCTYCSTFKALYSDSGYLRFRTAENVIGELKEMKFRFPRMQAITFCDD--NFFALKE 269

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +            +         A+   V     +    AG+N + +G+Q+  E++ +
Sbjct: 270 DQLEKYAALYRNEIGLP----FRCLAHAHDVNKKKLEILVNAGMNELQIGIQTGSEKTRK 325

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSY-AVDHLS 203
              R  +  + + A+ L      R+   +D I   P +        L     +    HL+
Sbjct: 326 LYKRGPSTDKVLDAVGLIHQFKGRLMPFYDFIIDNPFEEEEDLIETLHMIQKFPRPYHLN 385

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           ++ L    GT   K  ++  L++ S            +  
Sbjct: 386 VFSLIFLPGTELQKKAQEKGLIIDSTRQFESRKKSYINFL 425


>gi|328948379|ref|YP_004365716.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Treponema succinifaciens
           DSM 2489]
 gi|328448703|gb|AEB14419.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Treponema succinifaciens
           DSM 2489]
          Length = 460

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 17/207 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLIEP 86
           C   C YC     +  Y  G+E  +   + ++     +   R +  I   G    S    
Sbjct: 175 CNNFCSYC-----IVPYVRGRE--VSRPVEQILHELDVLARRGVKEITLLGQNVNSYKGA 227

Query: 87  QNIA---LILDGIAKNWTVSSNVEITI--EANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    L+          +S +E      +NP            +       + + VQ 
Sbjct: 228 DGMNFPNLLKTICRHLEQTNSPIEWIRFESSNPKDFSDELIDVIAEEKRICRGLHIAVQH 287

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R +   + +  +   R   P +    D++   P +T   +E         
Sbjct: 288 GSNSILKAMNRKYTREQYLLLVQKLRERIPEIQLTTDIMLGFPGETEEDFEQAASLMKEV 347

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             +   +Y     +GT   KM     L
Sbjct: 348 EFESAFMYYYNPREGTPAAKMQNQIPL 374


>gi|302333424|gb|ADL23617.1| putative Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 317

 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADSIAVQFKEIKEKMHEKWHEGKYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLG 136
           T +      +    + + K   V   V ++I   P  +  +  +            + LG
Sbjct: 99  TNTHAPVAVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLADLNQRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ + +   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTIHQSTSDLINRAHDMKTYYDGVAKLRKHNINVCTHIINGLPGEDYDMMMATAKEVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  + ++ L + KGT   K +  G L   ++  
Sbjct: 216 MDVQGIKIHLLHLLKGTPMVKQYDKGLLTFMTQEE 250


>gi|218459119|ref|ZP_03499210.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli Kim 5]
          Length = 366

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 16/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L   + +  I      P+     
Sbjct: 140 CPHLCNYCGQRGFWTRWRHRSPELFA------REIARLYREQGVELINLADENPTSSRKA 193

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   IA+N  V    +I        +  + +    YRKAGV R  LG+++ +E +L
Sbjct: 194 WLAFLEAMIAENVPV----QIVGSTRADDIVRDADILHLYRKAGVVRWLLGMENTDEATL 249

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++ ++      ++ LSY  D +   
Sbjct: 250 ALIKKGGAKATDREAIRLLRRHDILSMATWVVGFEEEKLSDLWRGFRQLLSYDPDQIQAL 309

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +T  + T F+++ +D  ++       +  ++    +     LH +
Sbjct: 310 YVTPHRWTPFFRIARDRQVI----EADIRKWDYKHQVLKMRYLHPF 351


>gi|210610645|ref|ZP_03288545.1| hypothetical protein CLONEX_00735 [Clostridium nexile DSM 1787]
 gi|210152367|gb|EEA83373.1| hypothetical protein CLONEX_00735 [Clostridium nexile DSM 1787]
          Length = 491

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 88/241 (36%), Gaps = 28/241 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C +KC +C     +N +  R     E        E+ +M+ + G R I  +F      ++
Sbjct: 228 CTQKCNFCGGMKYWNCYYMRSSEKIEE-------ELIYMKNVWGNR-IKVVFLADELFTV 279

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              +++  ++D   ++  + + V     +   +      +  +K     +  G ++  + 
Sbjct: 280 -NRKHVKDVVDVFERHKIMLNGVF----SRVDTFNDELAKEIKKISKT-VVFGAENCVDD 333

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY----AV 199
            L+   +N    + + A  +A+     +S + I  LP +++      L    S      V
Sbjct: 334 ILKLANKNQKFKDVLHACDIAKRNKLDVSLEWIVGLPGESIESAIKNLNTIYSMLVNKKV 393

Query: 200 DHLSLYQLTIEKGTLFY------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D+++ Y       T ++       + K G      E      Y+L  S+ S      Y I
Sbjct: 394 DNINTYVFCPHPNTPYFIEKEKSGIEKIGKYENMLEEGGFPQYSLKNSLNSNQIFIYYLI 453

Query: 254 S 254
           S
Sbjct: 454 S 454


>gi|167581190|ref|ZP_02374064.1| radical SAM domain protein [Burkholderia thailandensis TXDOH]
 gi|257138494|ref|ZP_05586756.1| radical SAM domain-containing protein [Burkholderia thailandensis
           E264]
          Length = 473

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + ++S L E++W+R       +  
Sbjct: 192 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VESVLAEVKWIRDNMP--EVKE 248

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 249 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 299

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  +
Sbjct: 300 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTI 359

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y  
Sbjct: 360 EYAKEINPHTIQVSLAAPYPGTRLYNQ 386


>gi|296875984|ref|ZP_06900043.1| radical SAM protein [Streptococcus parasanguinis ATCC 15912]
 gi|296433059|gb|EFH18847.1| radical SAM protein [Streptococcus parasanguinis ATCC 15912]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 14/226 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 45  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDKVDV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRF 147
           I +   +       V I I   P  +  +      +   +R    I LG+Q+  E + + 
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDDTLAYLAEL-TDRMHVTIELGLQTTYEATSQL 160

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
           + R H+    +  +   R   P+  +   LI  LP +T       ++R +    +D + L
Sbjct: 161 INRAHSYDLYVETVKRIRKQVPKAEIVSHLINGLPGETHEMMVENVRRCVTDNEIDGIKL 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 221 HLLHLMTNTRMQRDYHEGRLQLMSQEEYVKVICDQLEIIPKHIVIH 266


>gi|153814371|ref|ZP_01967039.1| hypothetical protein RUMTOR_00581 [Ruminococcus torques ATCC 27756]
 gi|317500085|ref|ZP_07958320.1| radical SAM protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087691|ref|ZP_08336617.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848767|gb|EDK25685.1| hypothetical protein RUMTOR_00581 [Ruminococcus torques ATCC 27756]
 gi|316898570|gb|EFV20606.1| radical SAM protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330409672|gb|EGG89108.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 314

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 73/226 (32%), Gaps = 15/226 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQNI 89
           C +C   S +          +       +    +   R +     +F   T +     ++
Sbjct: 53  CIFC---SAMGSGDFAGNASLSITEQLREGKDAIRKKRPVRKFIAYFQAFTNTYAPVDHL 109

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-----SLGVQSLEEQS 144
             I      +  V     ++I   P  +     +   +   NRI      LG+Q++  ++
Sbjct: 110 EKIFTEAINDPDV---CALSIATRPDCLPPAVLELLGRL--NRIKPVWVELGLQTVNSET 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            RF+ R +       A+H  R +   +   +I  LP +T       +       +  + L
Sbjct: 165 ARFIRRGYPTDVFDHAVHRLRMLGITVIVHVILFLPYETKEMMFHTIDHLNKLDIQGIKL 224

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             L I KGT    +++     +P     ++L     +      +  
Sbjct: 225 QLLHILKGTDLAAVYEKTHFHVPDMEEYIELLGSCIAKLRPDIIVH 270


>gi|257076243|ref|ZP_05570604.1| hypothetical protein Faci_04225 [Ferroplasma acidarmanus fer1]
          Length = 365

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 62/179 (34%), Gaps = 13/179 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C F     R +   + +  S    +  ++    P  I  +   GG  S ++  
Sbjct: 67  CNVRCHFCAFY----RTQNDGDAYTLSIDDVVNEIKTYYEPYGIRQLLIQGGVNSFLDLD 122

Query: 88  NIALILDGIAKNWT-----VSSNVEITIEANPSSV-EVNNFQGYRKAGV-NRISLGVQSL 140
               +   I K +        S  E+   +  + +   +     R++G+      G + L
Sbjct: 123 YYTELFGRIKKEFPGLGIHGLSTAELHFISLKAHIPMKDLLIKLRESGLETIPGAGGEIL 182

Query: 141 EEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +    + +GR   +  + +  +  A  +    S  +++   + ++ +    L   L   
Sbjct: 183 DGSVRKRMGRPEASGRQWLEIMETAHKLGIHTSATMMFGHLETSLDKAHH-LLSILELQ 240


>gi|71902415|ref|ZP_00684371.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Xylella fastidiosa Ann-1]
 gi|71727853|gb|EAO30094.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Xylella fastidiosa Ann-1]
          Length = 375

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +++  T +       +V     C K   YC F               +  LTE+  +
Sbjct: 56  IEKFDHLPTPRAEGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPFEDVLTEIAHL 111

Query: 63  RQLTGPRSISSI-----FFGGGT---------PSLIEPQNIALILDGIAKNWTVSSNVEI 108
               G R I+ +      + G           P+     ++ L++  IA+  ++      
Sbjct: 112 ATQ-GVREINLLGQNVNAYRGAMDPGPSNNTNPAAPPYADLGLLIRAIAQFESIGRIRFT 170

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           T  ++P     +  + YR      N + L VQS  ++ L  + R + A E  + I   R 
Sbjct: 171 T--SHPLEFSDSLVEAYRDIPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRA 228

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + P +S   D I   P ++ T ++  +Q       D    +  +   GT    +   
Sbjct: 229 VRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDH 285


>gi|71276464|ref|ZP_00652740.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Xylella fastidiosa Dixon]
 gi|170731017|ref|YP_001776450.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
           fastidiosa M12]
 gi|229891034|sp|B0U4P1|MIAB_XYLFM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71162780|gb|EAO12506.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Xylella fastidiosa Dixon]
 gi|167965810|gb|ACA12820.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Xylella fastidiosa M12]
          Length = 497

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +++  T +       +V     C K   YC F               +  LTE+  +
Sbjct: 178 IEKFDHLPTPRAEGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPFEDVLTEIAHL 233

Query: 63  RQLTGPRSISSI-----FFGGGT---------PSLIEPQNIALILDGIAKNWTVSSNVEI 108
               G R I+ +      + G           P+     ++ L++  IA+  ++      
Sbjct: 234 ATQ-GVREINLLGQNVNAYRGAMDPGPSNNTNPAAPPYADLGLLIRAIAQFESIGRIRFT 292

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           T  ++P     +  + YR      N + L VQS  ++ L  + R + A E  + I   R 
Sbjct: 293 T--SHPLEFSDSLVEAYRDIPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRA 350

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + P +S   D I   P ++ T ++  +Q       D    +  +   GT    +   
Sbjct: 351 VRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDH 407


>gi|330994671|ref|ZP_08318594.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Gluconacetobacter sp. SXCC-1]
 gi|329758312|gb|EGG74833.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Gluconacetobacter sp. SXCC-1]
          Length = 468

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 58/197 (29%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C       R        +       + +    G R I+ +      + G  P 
Sbjct: 180 CDKFCSFC--VVPYTRGAESSRPAVAVLAEARRLVAA--GAREITLLGQNVNAYHGEGP- 234

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +               I     +P  +E +    +R     +  + L VQS
Sbjct: 235 ---DGATWGLARLARVLADEVGVARIRYTTSHPRDMEDDLIAAHRDLPQLMPFLHLPVQS 291

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E    +   R   P   +S D I   P +T   +   ++     
Sbjct: 292 GSDRVLAAMNRGHTADEYRVLVDRLRTARPDLALSSDFIVGHPGETDGDFADTMRLIRDI 351

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 352 GFAQAYSFKYSPRPGTP 368


>gi|312898799|ref|ZP_07758187.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310619961|gb|EFQ03533.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 576

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 6/152 (3%)

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
            P++   +L       +V  ++   +E  P  +   + +  + A   RI +  G+QS  E
Sbjct: 236 NPEHYRTLL---HFFVSVPEDINFHLEIEPGLLTDEDLEILKAAPPGRIQMEMGIQSTYE 292

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R ++       +   R+     +  DLI  LP +TM   +       +     
Sbjct: 293 RTLDAVRRVNDWPRIEKVMKTLRDYQSVHLHLDLIVGLPYETMEHLQQSFNEIYALKPHV 352

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           L +  L + KG+       +     P     +
Sbjct: 353 LQIGFLKLLKGSGIRNRFAEDYRFDPDGPYEI 384


>gi|289578350|ref|YP_003476977.1| RNA modification enzyme, MiaB family [Thermoanaerobacter italicus
           Ab9]
 gi|289528063|gb|ADD02415.1| RNA modification enzyme, MiaB family [Thermoanaerobacter italicus
           Ab9]
          Length = 471

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
             +  +  ++L  +V+  + C   C YC     +  Y  G+E   +     +  +++L  
Sbjct: 166 EELPVKRDSNLKAWVNIIYGCNNFCTYC-----IVPYTRGREKS-RKPEDIVAEVKELAQ 219

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQ 123
                    G    S    +++   +      + ++    I     + ++P  +      
Sbjct: 220 KGYKEITLLGQNVNSY--GKDLDEDITFAKLLYKLNEIEGIERIRFMTSHPKDISDELIY 277

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             R        + L VQ+   + L+ + R +     +  I   R+  P ++   D+I   
Sbjct: 278 AMRDLNKVCEHLHLPVQAGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGF 337

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           P +T   +   L        D    +  +   GT+   M    D  +  E +  
Sbjct: 338 PGETEEDFLETLDLVERVRFDAAYTFIYSKRAGTVAANMPDQVDDAVKHERLER 391


>gi|332975771|gb|EGK12652.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Desmospora sp. 8437]
          Length = 448

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 79/230 (34%), Gaps = 9/230 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S L + + +        + +    GG     E  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRKPESVLRQARQLVDAGYKEIVLTGIHTGGYGEDFEDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +A +L  + K   +      +IEA+   ++        K+      + + +Q+ ++  L
Sbjct: 210 KLADLLWDLDKVEGLKRIRISSIEAS--QIDDRVIDVLNKSDKMCRHLHIPLQAGDDVVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    I       P ++   D+I   P +T  Q+E   +         L 
Sbjct: 268 KRMRRRYTVDEYRRKIEHLHRAMPGVAITSDVIVGFPGETEEQFENGYRLIEELGFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M       +  + VA  +    +   +    +A E+
Sbjct: 328 VFPYSTRTGTPAARMTDQVPAEVKQDRVARLIALSDRLALTYASKYAGEV 377


>gi|294142664|ref|YP_003558642.1| hypothetical protein SVI_3893 [Shewanella violacea DSS12]
 gi|293329133|dbj|BAJ03864.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 294

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 18/242 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +CD   +    K  +   +     +++ + +     S+S +F   G    +    + 
Sbjct: 30  KCSFCD--MYTAPQKRFRAQKLDKVAEDIKTVAR--RGVSVSRVFLADGDAMSLPFSRLE 85

Query: 91  LILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            I   I ++   V+      +  N  +         R+ G++ + +G +S +++ L+ + 
Sbjct: 86  EICLLIREHLPQVTRISSYCLPRNLKNKSAEQLLRLRELGLSLLYIGCESGDDEVLKRIE 145

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQL 207
           +    + ++ A+   +    + S  ++  L     +        +   +   ++LS   +
Sbjct: 146 KGETYASSLEALQKIKAAGMKSSVMILNGLGGSELSEQHAINSARLMNAAQPEYLSTLVV 205

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+  GT       DG   LP +                           +     S H  
Sbjct: 206 TLPLGTEKMDKAFDGLFQLPDQMGLFREMRTLLQHLEL-----------TKTIFRSDHAS 254

Query: 268 NY 269
           NY
Sbjct: 255 NY 256


>gi|166031237|ref|ZP_02234066.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
           27755]
 gi|166029084|gb|EDR47841.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
           27755]
          Length = 428

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 71/230 (30%), Gaps = 18/230 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +  Y  G+    ++    ++ +R L        +  G    S     
Sbjct: 153 CNQFCSYC-----IIPYARGRVRS-RNLEHVLEEVRTLAASGYKEVVLTGIHLSSY-GID 205

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +L+ I K   +     I +    P  +                   L +QS    +
Sbjct: 206 TGESLLELIQKVHEIDGIKRIRLGSLEPRIITEEFASSIAALPKMCPHFHLSLQSGCNAT 265

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R ++A E +    L R  F    ++ D+I   P +T  ++   +        D +
Sbjct: 266 LRRMNRRYSAEEYMEKCDLLRKYFHNPALTTDVIVGFPGETQEEFAESMDFV-----DRV 320

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + Y+  I K +               E +  +               AYE
Sbjct: 321 NFYETHIFKYSRRAGTKAAVMPDQIPEEIKSERSAKMIE-LGHRKQKAYE 369


>gi|91216870|ref|ZP_01253834.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychroflexus torquis
           ATCC 700755]
 gi|91185031|gb|EAS71410.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Psychroflexus torquis
           ATCC 700755]
          Length = 485

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-- 167
           +NP  + ++  +   K     + I L VQS  ++ L+ + R H   E    I   R I  
Sbjct: 273 SNPQDMTIDVIEVMAKHNNICDYIHLPVQSGSDRILKKMNRLHTREEYFRLIDNIRKIIP 332

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              +S D+I   P +T    +  L    +   +   ++  +   GTL  K  
Sbjct: 333 GCGISQDMIIGFPSETEEDHKDTLSLMENVKYNFGYMFAYSERPGTLGAKKF 384


>gi|150017871|ref|YP_001310125.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904336|gb|ABR35169.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 448

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 84/232 (36%), Gaps = 21/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +NS     K      I+  + +++ + +      I   F G        P+
Sbjct: 169 CPFKCDFC-YNSCTNSIKTYINRPIEDVIKDIK-VLKTKHIMFIDDNFIG-------NPK 219

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L  I     +       + +N   +        +++G   + +G +S+  +S+  
Sbjct: 220 WTKELLKEIK---PLKLKWNAAVTSNIVDM-PELLDEMKESGCQSLFIGFESINSKSIES 275

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +   + S     +         ++   ++ L +     ++  L+  +   ++ ++ + 
Sbjct: 276 VHKIQNSVSRYEKLVDEIHKRGIMINASFVFGLDEDDAEIFKSTLEWIVKNKIETVTSHI 335

Query: 207 LTIEKGTLFY----KMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAY 251
           +T   GT  Y    K ++  D  L + N +  +Y   N+T        L  Y
Sbjct: 336 MTPYPGTKLYASLLKENRIVDHNLSNYNTSHVVYKPKNMTAEELYDGYLWIY 387


>gi|307942735|ref|ZP_07658080.1| protein YleA [Roseibium sp. TrichSKD4]
 gi|307773531|gb|EFO32747.1| protein YleA [Roseibium sp. TrichSKD4]
          Length = 239

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 4/136 (2%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P  ++    + +R     +  + L VQS  ++ L+ + R H   E    I   R  
Sbjct: 17  TTSHPRDMDDELIEAHRDLKSLMPYLHLPVQSGSDKILKSMNRKHTRDEYFRLIDRIREA 76

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P ++   D I   P ++   +E  +             ++ +   GT    M       
Sbjct: 77  APDIALSGDFIVGFPGESDADFEDTMDLIRRVEYGSAFSFKYSQRPGTPGATMEDQVPED 136

Query: 226 LPSENVAVDLYNLTQS 241
           + +  ++     LTQ 
Sbjct: 137 VKTARLSELQALLTQQ 152


>gi|294338754|emb|CAZ87086.1| MiaB protein (Methylthiolation of isopentenylated A37 derivatives
           in tRNA) [Thiomonas sp. 3As]
          Length = 453

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C K C YC       R +      +       +      G R ++ +  G    + +   
Sbjct: 163 CSKYCSYC--VVPYTRGEEVSRPLVDVLTEVAELAS--LGVREVTLL--GQNVNAWLGSG 216

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E ++ A +L+ +A+   +      T  ++P          Y +    VN + L VQ   +
Sbjct: 217 EGEDFAFLLECVAEIDGIERIRYTT--SHPKEFTQRLIDAYGRIPKLVNHVHLPVQHGSD 274

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R ++A E  + +   R + P +    D I   P +T   +   ++       D
Sbjct: 275 RILAAMKRGYSALEFKSIVRRLRAVRPDICIGSDFIVGFPGETDADFTQLMKLIEDMQFD 334

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +   GT    +
Sbjct: 335 ASFSFIFSPRPGTPAANL 352


>gi|30264818|ref|NP_847195.1| hypothetical protein BA_5001 [Bacillus anthracis str. Ames]
 gi|47530303|ref|YP_021652.1| hypothetical protein GBAA_5001 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187637|ref|YP_030890.1| hypothetical protein BAS4646 [Bacillus anthracis str. Sterne]
 gi|165869846|ref|ZP_02214504.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0488]
 gi|167634019|ref|ZP_02392342.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0442]
 gi|167638204|ref|ZP_02396482.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0193]
 gi|170685582|ref|ZP_02876805.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0465]
 gi|170705475|ref|ZP_02895939.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0389]
 gi|177651252|ref|ZP_02934083.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0174]
 gi|190568268|ref|ZP_03021176.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817543|ref|YP_002817552.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           CDC 684]
 gi|228929805|ref|ZP_04092821.1| hypothetical protein bthur0010_44890 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229124320|ref|ZP_04253510.1| hypothetical protein bcere0016_46050 [Bacillus cereus 95/8201]
 gi|229600682|ref|YP_002869026.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0248]
 gi|254687559|ref|ZP_05151415.1| hypothetical protein BantC_27445 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725124|ref|ZP_05186907.1| hypothetical protein BantA1_22094 [Bacillus anthracis str. A1055]
 gi|254736862|ref|ZP_05194568.1| hypothetical protein BantWNA_16976 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741897|ref|ZP_05199584.1| hypothetical protein BantKB_12903 [Bacillus anthracis str. Kruger
           B]
 gi|254754505|ref|ZP_05206540.1| hypothetical protein BantV_18642 [Bacillus anthracis str. Vollum]
 gi|254757338|ref|ZP_05209365.1| hypothetical protein BantA9_03436 [Bacillus anthracis str.
           Australia 94]
 gi|30259493|gb|AAP28681.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           Ames]
 gi|47505451|gb|AAT34127.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49181564|gb|AAT56940.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           Sterne]
 gi|164714675|gb|EDR20194.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0488]
 gi|167514021|gb|EDR89389.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0193]
 gi|167530820|gb|EDR93522.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0442]
 gi|170129600|gb|EDS98463.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0389]
 gi|170670046|gb|EDT20786.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0465]
 gi|172083078|gb|EDT68140.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0174]
 gi|190560524|gb|EDV14501.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis
           Tsiankovskii-I]
 gi|227005403|gb|ACP15146.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           CDC 684]
 gi|228659143|gb|EEL14793.1| hypothetical protein bcere0016_46050 [Bacillus cereus 95/8201]
 gi|228829862|gb|EEM75483.1| hypothetical protein bthur0010_44890 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229265090|gb|ACQ46727.1| conserved hypothetical protein TIGR01212 [Bacillus anthracis str.
           A0248]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      +  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDIQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|84514983|ref|ZP_01002346.1| MiaB-like tRNA modifying enzyme [Loktanella vestfoldensis SKA53]
 gi|84511142|gb|EAQ07596.1| MiaB-like tRNA modifying enzyme [Loktanella vestfoldensis SKA53]
          Length = 422

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V     +      +           +    +G   PS  +
Sbjct: 152 CDHRCTFCIIPFG-RGNSRSVPAGVVVDQIKRLVDRGYAEVVLTGVDLTSWGADLPSAPK 210

Query: 86  PQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             ++   IL  +     +  +   +IE     V+ N           +  + L +Q  ++
Sbjct: 211 LGDLVMRILKLVPDLPRLRISSIDSIE-----VDDNLLAAIATEPRLMPHLHLSLQHGDD 265

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H   +AI     AR + P M+F  D+I   P +T   +   L       + 
Sbjct: 266 LILKRMKRRHLRDDAIRFCETARRLRPDMTFGADIIAGFPTETEDMFASSLALVRECDLT 325

Query: 201 HLSLYQLTIEKGTLFYKMH 219
            L ++  +   GT   +M 
Sbjct: 326 WLHVFPYSARPGTPAARMP 344


>gi|127513851|ref|YP_001095048.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella loihica PV-4]
 gi|229890652|sp|A3QH41|MIAB_SHELP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|126639146|gb|ABO24789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella loihica PV-4]
          Length = 474

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  + +  G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPVDDVILEIAQLAEQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +I    + +     +     I     +P     +    Y      V+ + L VQS  + 
Sbjct: 213 DDICTFAELLRYVAAIDGIDRIRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDL 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P ++   +   ++       DH
Sbjct: 273 ILTQMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGESKQDFADTMKLIEDVQFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D  L    E +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPASDLPDDVSLDEKKERLAILQDRITQQAMRY 376


>gi|308233434|ref|ZP_07664171.1| RNA modification enzyme, MiaB family protein [Atopobium vaginae DSM
           15829]
          Length = 455

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)

Query: 7   YENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           +  ++  +   S   +V     C   C +C     +  Y  G+E   +     +  +R+L
Sbjct: 144 FSTDLPSKRDQSFHAWVPIMTGCNNFCTFC-----IVPYVRGRERS-RVLERVVDEVRRL 197

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE------ANPSSVEV 119
                      G    S         +         +    E+ IE      +NP  +  
Sbjct: 198 KDDGVREVTLLGQNVNSY-----GRDLYKKPCFAELLRKVGEVGIERIRFTSSNPKDLSD 252

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDL 175
                  +    + ++ L VQS   + L+ + R++   + +  I   ++  P +  S D+
Sbjct: 253 ETIAAMAETPAVMPQLHLAVQSGSTRILKAMHRSYTREKYLEVIDHLKSAMPDIALSTDI 312

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           I   P +T   +E  L             +  +   GT    
Sbjct: 313 IVGFPGETEEDFEETLSLVREVEYSSAFTFIYSKRPGTPAAN 354


>gi|302390015|ref|YP_003825836.1| cobalamin B12-binding domain protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200643|gb|ADL08213.1| cobalamin B12-binding domain protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 563

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 59/196 (30%), Gaps = 21/196 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C                + S    ++        R +S     G     +  +
Sbjct: 182 CPFNCAFC----------------LSSLDKAVRTASLEKVERDLSFFVRKGVDTVKLVDR 225

Query: 88  NIA----LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEE 142
           +        +  +     +  N     E NP  V     +G        R  +G+Q+   
Sbjct: 226 SFNCDTERAIAILDIIRRLGGNTVFHCEINPELVNDRFLKGLEGIEDRLRFEVGIQTTNP 285

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +SL+ + RN +   A+  I   +    ++  DLI  LP      +            D +
Sbjct: 286 ESLKEISRNPDVERALRGIERLKAAGVKLHVDLIAGLPYDDFESFSRAFDDVYRLEPDEI 345

Query: 203 SLYQLTIEKGTLFYKM 218
            L  L + KGT     
Sbjct: 346 QLGFLKLLKGTRLRDK 361


>gi|291549607|emb|CBL25869.1| Fe-S oxidoreductase [Ruminococcus torques L2-14]
          Length = 342

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 95/246 (38%), Gaps = 12/246 (4%)

Query: 28  CV-KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CD      +YK  +  + +    +++        ++ ++ F   G   ++  
Sbjct: 26  CHWNKCYFCDLYK---KYKFSRRRY-EEIEEDLKKAADSEYAQNYTTCFLQDGDAFVLRT 81

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  IL+GI K   + +   +T  A   S+    V+  +  + AG+  +  G+++  + 
Sbjct: 82  EFLMQILEGIHKY--LPNIKHVTTYARADSIARKSVSELRELKTAGIEHLYCGMETGSDL 139

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            LR + +  +A+  I +   A+     +S   ++ +  + +         +       D 
Sbjct: 140 ILRKINKGFDAATIIISGTKAKEAGMVLSEFTLFGIGGKELAEENAVETAKVLNVIKPDF 199

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + ++   I+  +  +   K+ +L L SE   V    +   + +      Y   +   L  
Sbjct: 200 VRVHATGIKLSSEMWNYVKNKELTLQSEEEIVSEQKIMLELLADDMDCIYMNEHIVNLLL 259

Query: 262 ESLHNL 267
           E   N+
Sbjct: 260 EVRGNI 265


>gi|328944037|ref|ZP_08241502.1| tRNA-I(6)A37 thiotransferase [Atopobium vaginae DSM 15829]
 gi|327492006|gb|EGF23780.1| tRNA-I(6)A37 thiotransferase [Atopobium vaginae DSM 15829]
          Length = 460

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 22/222 (9%)

Query: 7   YENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
           +  ++  +   S   +V     C   C +C     +  Y  G+E   +     +  +R+L
Sbjct: 149 FSTDLPSKRDQSFHAWVPIMTGCNNFCTFC-----IVPYVRGRERS-RVLERVVDEVRRL 202

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE------ANPSSVEV 119
                      G    S         +         +    E+ IE      +NP  +  
Sbjct: 203 KDDGVREVTLLGQNVNSY-----GRDLYKKPCFAELLRKVGEVGIERIRFTSSNPKDLSD 257

Query: 120 NNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDL 175
                  +    + ++ L VQS   + L+ + R++   + +  I   ++  P +  S D+
Sbjct: 258 ETIAAMAETPAVMPQLHLAVQSGSTRILKAMHRSYTREKYLEVIDHLKSAMPDIALSTDI 317

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           I   P +T   +E  L             +  +   GT    
Sbjct: 318 IVGFPGETEEDFEETLSLVREVEYSSAFTFIYSKRPGTPAAN 359


>gi|212697105|ref|ZP_03305233.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675880|gb|EEB35487.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 432

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    + R     ++      ++ +   ++L        +  G    S  +  
Sbjct: 152 CNMYCSYC-LIPYARGNIASRD-----LVSIIDEAKRLRDNGFKEIVLTGIHVASYGKDL 205

Query: 88  NIA-LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
           ++   ++D I     +     I +    P  ++    Q  +  K   +   L +QS  + 
Sbjct: 206 DLNISLIDVIEHIAKIDGIERIRLSSMEPRHIDREFLQRMKDTKKACDHFHLSLQSGSDD 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++       + L R  FP      D+I   P ++    E       +     
Sbjct: 266 VLKLMNRKYDTKIFKEKVDLIREYFPNAGLTTDIIVGFPNESEKNHEQTKDFVRNIKFSK 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
             L++ +   GT    M    D
Sbjct: 326 THLFKYSKRDGTKAANMKNQVD 347


>gi|83312759|ref|YP_423023.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
 gi|82947600|dbj|BAE52464.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
          Length = 504

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 66/201 (32%), Gaps = 6/201 (2%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +CD    V   +  +   +     E+  +R+              G P   E +
Sbjct: 177 CPFRCEFCD--IIVMFGRRPRVKDLDQIEKELDQLRRFGARSVFFVDDNLIGNPK--EAK 232

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           ++   L    ++     +       N +  +    + +R A    + +G+++ +   L+ 
Sbjct: 233 DLLRFLAEYQRHHGYMFSFGTEASLNMAQ-DDELLELFRAANFGWVFIGIETTDPVGLKE 291

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            G+  N   + + AI    +    +    I      T+  +E + +      +    +  
Sbjct: 292 TGKTQNLREDTLTAIRRIYSHGIDVLGGFIIGFDHDTLDTFEHQYRFITDAGIQSAMIGL 351

Query: 207 LTIEKGTLFYKMHKDGDLVLP 227
           L     T  +   +    +LP
Sbjct: 352 LMALPRTPLHARMEREGRLLP 372


>gi|256820151|ref|YP_003141430.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Capnocytophaga
           ochracea DSM 7271]
 gi|256581734|gb|ACU92869.1| RNA modification enzyme, MiaB family [Capnocytophaga ochracea DSM
           7271]
          Length = 482

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 29/236 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C   F    R  +  ++ +  S L E+  ++        L G    S +++GG
Sbjct: 178 CDNMCTFCIVPF---TRGRERSRDPY--SILNEIADLQARGFKEVTLLGQNVDSYLWYGG 232

Query: 79  G---TPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           G     S             A +LD +A           T  +NP  + ++      K  
Sbjct: 233 GLKKDFSKASEMQQATAINFAKLLDMVAIAQPEMRIRFST--SNPQDMTLDVIDTMAKHP 290

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L VQS   + L+ + R H   E  A I   R   P   +S D+I   P +T  
Sbjct: 291 NICKYIHLPVQSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETEE 350

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  L        D   ++  +   GTL  +  +D       +    ++ +L Q 
Sbjct: 351 DHQDTLSLMEYVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQK 406


>gi|224827052|ref|ZP_03700149.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Lutiella nitroferrum
           2002]
 gi|224600718|gb|EEG06904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Lutiella nitroferrum
           2002]
          Length = 444

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 64/196 (32%), Gaps = 10/196 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEPQ 87
           C  YC F                  LTE+  +             ++    G  +  E  
Sbjct: 156 CSKYCSFCVVPYTRGEEVSRPFDDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMADGEIA 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + AL+L+ + +   V      T  ++P          Y K    V+ + L VQS  ++ L
Sbjct: 216 DFALLLEYVHEVPGVERIRFTT--SHPREFSQRIIDCYAKLPKLVSHLHLPVQSGCDRVL 273

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R + A E  + I    A      +S D I   P +T   +   L+       D   
Sbjct: 274 MAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEDDFNATLKLVKDLEFDFSF 333

Query: 204 LYQLTIEKGTLFYKMH 219
           ++  +   GT    + 
Sbjct: 334 VFIYSPRPGTPAANLP 349


>gi|189501679|ref|YP_001957396.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497120|gb|ACE05667.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 441

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 69/199 (34%), Gaps = 23/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGT------ 80
           C   C +C   +        + + I+S + + + +        + + +  G         
Sbjct: 151 CNYHCSFC---TIPLARGKSRSDTIESIVEQARKIADQGIKEIVLTGVNIGDYGIIDNRR 207

Query: 81  -PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             + +       +++ + K   +      +IE  P+ +     Q   ++G  V    + +
Sbjct: 208 QTNFLS------LIEALEKVVDIKRFRISSIE--PNLLTDEIIQFVAQSGRFVPHFHIPL 259

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS     L+ + R +     +  +   + + P   +  D+I   P +T  ++    Q   
Sbjct: 260 QSGNNDILKLMRRRYQRELYVERVAHIKKLMPHCCIGVDVIVGFPGETEEKFLDTYQFLN 319

Query: 196 SYAVDHLSLYQLTIEKGTL 214
              + +L ++  +  + T 
Sbjct: 320 ELDISYLHVFPYSERQNTQ 338


>gi|168702635|ref|ZP_02734912.1| probable MiaB protein-putative tRNA-thiotransferase [Gemmata
           obscuriglobus UQM 2246]
          Length = 492

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 69/213 (32%), Gaps = 14/213 (6%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                 YV     C K C YC   S     +      I         +RQL         
Sbjct: 156 PTPFQAYVRIQIGCDKFCTYCVVPSTRGPEQSRPPEHI------WNEVRQLVDQGCKEVT 209

Query: 75  FFGGGTPSLI--EPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG-- 129
             G    S +         + D IA    V+    I    N P  +  +     R     
Sbjct: 210 LLGQTVNSYVYESGDTRTRLSDLIAGMHDVAGLERIKFVTNYPKDMTDDLLDAVRDLPKV 269

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
           V  + + VQS  ++ L+ + R++ A+  +  +   R + P +S   D I     +T   +
Sbjct: 270 VKYLHVPVQSGCDEVLKRMKRSYTAAYYMEMLARCRELVPGVSVSSDFIVGFCGETEESF 329

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +  ++        +  +++ +   GT   + + 
Sbjct: 330 QKSMELVREARFKNSFIFKYSERGGTKAAERYP 362


>gi|257870817|ref|ZP_05650470.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257804981|gb|EEV33803.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 327

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 10/203 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S           +      F  E+  M +         ++F   T +      I  
Sbjct: 52  CTFCSVSGSGDMIVAPEAPLPVQFHKEIDVMHKKWPHVDKYIVYFQNFTNTHAPAAVIRE 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +    T+   V ++I   P  +  +      +        + LG+Q+  E +   +
Sbjct: 112 RFEQV---LTMPGVVGVSIGTRPDCLPDDVVDYLAELNQRFYLWVELGLQTTFETTSNAI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLYQL 207
            R H+    +  +   R    ++   LI  LP +T+      +++  L   +  + L+ L
Sbjct: 169 NRAHDYQTYLDGVAKLRKHGIQVCTHLINGLPGETLEMMRENVRKTILDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            + + T   + + +G L L    
Sbjct: 229 HLMRNTRMLRDYHEGKLQLMQRE 251


>gi|311031211|ref|ZP_07709301.1| Fe-S oxidoreductase [Bacillus sp. m3-13]
          Length = 326

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 76/237 (32%), Gaps = 21/237 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTE---MQWMRQLTGPRSISSIFF 76
           C  +        C +C              N     +T+   ++              +F
Sbjct: 45  CPNRDGTVAHGGCTFCS----AAGSGDFAGNRADDLVTQFNEIKDKMHHKWKDGKYMAYF 100

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +    + +    + + K   V   V ++I   P  +  +  +   +        +
Sbjct: 101 QAFTNTHAPVEVLREKYETVLKQEGV---VGLSIGTRPDCLPDDVVEYLAELNERTYLWV 157

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +         + 
Sbjct: 158 ELGLQTVHERTALLINRAHDFETYVEGVNKLRKHGIRVCSHIIDGLPLEDNKMMMETAEA 217

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
                V  + ++ L + KGT   K ++ G L   S +  + L      I     +  
Sbjct: 218 VAKLDVQGIKIHLLHLLKGTPMVKQYEKGMLEFLSFDDYIQLVCDQLEILPPEMIVH 274


>gi|311233220|gb|ADP86074.1| RNA modification enzyme, MiaB family [Desulfovibrio vulgaris RCH1]
          Length = 476

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 18/216 (8%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQW 61
            + + GQG+    V+V+    C   C YC    + R  +  +      +  ++ L     
Sbjct: 164 RDAVLGQGAVPASVFVNIMQGCDNFCAYC-IVPYTRGRQKSRATGTILDECRALLDRGAR 222

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L G    S      G  +       A +L  +A    +     +T   +P  +    
Sbjct: 223 EITLLGQNVNSFGQDSHGDGTTF-----AQLLHKVAALPGLERLRFVT--PHPKDIAPEV 275

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            + +        R+ L +Q+  ++ L+ +GR ++ +  +  +   R   P +  S D+I 
Sbjct: 276 VEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLRAARPDIVLSSDIIV 335

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             P +T   +   +    +        +  +   GT
Sbjct: 336 GFPGETEEDFMETMDALETVGYAASYSFCYSDRPGT 371


>gi|225018519|ref|ZP_03707711.1| hypothetical protein CLOSTMETH_02466 [Clostridium methylpentosum
           DSM 5476]
 gi|224948720|gb|EEG29929.1| hypothetical protein CLOSTMETH_02466 [Clostridium methylpentosum
           DSM 5476]
          Length = 496

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 75/234 (32%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     ++  RQL           G    S    +
Sbjct: 194 CNNFCTYC-----IVPYVRGRERS-REPDAILREARQLVADGYKEITLLGQNVNSYGKNL 247

Query: 85  E-PQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P   + +L        +  +  I  + ++P                  N + L VQ  
Sbjct: 248 PQPIRFSQLL---RMINDIPGDFRIRFMTSHPKDATRELIDTIADCDKVCNHLHLPVQCG 304

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ LR + R +   + +  +  A+   P +S   D+I   P +T   ++  L+   +  
Sbjct: 305 SDEILRRMNRGYTCEQYLELVEYAKKRIPGLSLSSDIIVGFPGETYENFQGTLKLIEAVG 364

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL-TQSITSAHGLHAY 251
            D L  +  +   GT   K     D V P E        L  Q+         Y
Sbjct: 365 YDLLYTFIYSKRVGT---KAANYDDPVDPKEKSRWFRELLEVQAKIGRANFEGY 415


>gi|209517500|ref|ZP_03266340.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. H160]
 gi|209502033|gb|EEA02049.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. H160]
          Length = 461

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 64/205 (31%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C K C YC                +   LTE+  +          L    +     FGG 
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYRGKFGGA 213

Query: 80  TP-SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                 E  + A +++ +A    +      T  ++P          Y K    V+ + L 
Sbjct: 214 LTIGSTEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLP 271

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + R +   E  + I    A      +S D+I   P +T   +   +   
Sbjct: 272 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETDEDFAKMMALV 331

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
                D    +  +   GT    +H
Sbjct: 332 EEMKYDTSFSFIYSPRPGTPAANLH 356


>gi|126736946|ref|ZP_01752681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp.
           SK209-2-6]
 gi|126721531|gb|EBA18234.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp.
           SK209-2-6]
          Length = 440

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K   +C F                  L E Q + +  G R I+ +      + G G  
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREAQELVER-GVREITLLGQNVNAYHGAGAN 214

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
             +    +   LD I     +         ++P+ ++ +  + +      +  + L VQ+
Sbjct: 215 GDLTLAQLIWELDKIDGLERIR-----FTTSHPNDMQDDLIEAHGTCAKLMPYLHLPVQA 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   I  I   R   P   +S D I   P++T   ++  +      
Sbjct: 270 GSDKILKRMNRSHTAESYIRLIERIRAARPDILISGDFIVGFPEETEEDFQATMDLVEEV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT   + 
Sbjct: 330 KYGTAYSFKYSTRPGTPAAER 350


>gi|83718703|ref|YP_442299.1| radical SAM domain-containing protein [Burkholderia thailandensis
           E264]
 gi|83652528|gb|ABC36591.1| radical SAM domain protein [Burkholderia thailandensis E264]
          Length = 503

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + ++S L E++W+R       +  
Sbjct: 222 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VESVLAEVKWIRDNMP--EVKE 278

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 279 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 329

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  +
Sbjct: 330 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCKKLGIKIHGTFILGLPGETKETIKKTI 389

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y  
Sbjct: 390 EYAKEINPHTIQVSLAAPYPGTRLYNQ 416


>gi|261402173|ref|YP_003246397.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
 gi|261369166|gb|ACX71915.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
          Length = 498

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 15/198 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGG----TPSL 83
           C +C   S     +   E  +   L E++ + +    R +      + +  G     P  
Sbjct: 214 CGFCSVPSVFGYARSRNEEDV---LKEIEALLEEGVKRIVLSAPDFLDYKRGEKLINPYF 270

Query: 84  IEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
            EP  + I  +L          +   +      +       + + K     I +G +S +
Sbjct: 271 PEPNYEVIETLLSNCRDLADKYNANILIENIKANLFNEKVAEIFSKYLRTPIYIGCESGD 330

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA--V 199
           E   + LGR  + S+ + A+ +A+    +     IY LP +T    +  ++        +
Sbjct: 331 ENHCKLLGRPTSPSDVLRAVKIAKKYNLKAQVYFIYGLPGETEETAKNTVRFMHKIKNYI 390

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D +++Y+      + F  
Sbjct: 391 DKITVYKFRPLPMSAFQN 408


>gi|237736632|ref|ZP_04567113.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420494|gb|EEO35541.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 556

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 77/235 (32%), Gaps = 30/235 (12%)

Query: 28  CVKKCPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC         + S + R K   + FI S +  ++++ +         +     
Sbjct: 183 CPFNCSYCMSSIDKSVRYYS-IERTKEDLKRFIDSPIKLLKFVDRTFNLSKEKYMVI--- 238

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGV 137
                       +L+   +  T         E N +  +            G  +  +GV
Sbjct: 239 ---------WKFLLENYREGITF------HFEINANIFDEETLDFLETVPKGYFQFEIGV 283

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           Q+++ Q+++ +GR +N       I         +  DLI  LP +T  ++        S 
Sbjct: 284 QTIDVQAMKSIGRVNNLERLEHNIRRISRNI-HLHLDLIAGLPYETYEKFRYSFDYVHSM 342

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             + + L  L + KGT  Y+  +  +    S+       N   S      L   E
Sbjct: 343 KPEMIQLGFLKLLKGTKMYEEREKYNYKYFSKPPYEVFSNDFISFAEIVKLKNLE 397


>gi|315225572|ref|ZP_07867382.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga ochracea
           F0287]
 gi|314944516|gb|EFS96555.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga ochracea
           F0287]
          Length = 482

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 29/236 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C   F    R  +  ++ +  S L E+  ++        L G    S +++GG
Sbjct: 178 CDNMCTFCIVPF---TRGRERSRDPY--SILNEIADLQARGFKEVTLLGQNVDSYLWYGG 232

Query: 79  G---TPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           G     S             A +LD +A           T  +NP  + ++      K  
Sbjct: 233 GLKKDFSKASEMQQATAINFAKLLDMVATAQPEMRIRFST--SNPQDMTLDVIDTMAKHP 290

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L VQS   + L+ + R H   E  A I   R   P   +S D+I   P +T  
Sbjct: 291 NICKYIHLPVQSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETED 350

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  L        D   ++  +   GTL  +  +D       +    ++ +L Q 
Sbjct: 351 DHQDTLSLMEYVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQK 406


>gi|282877988|ref|ZP_06286797.1| MiaB-like protein [Prevotella buccalis ATCC 35310]
 gi|281299989|gb|EFA92349.1| MiaB-like protein [Prevotella buccalis ATCC 35310]
          Length = 453

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 84/253 (33%), Gaps = 15/253 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +   +  G + I       G       +
Sbjct: 172 CNYFCTYC---TIPFARGFSRNPSIASLVQQAEQAAE-EGGKEIVLTGVNIGEFGERTDE 227

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      ++E  P  +           +A +    + +QS  ++ L
Sbjct: 228 TFLDLVKALDQVEGIRRFRISSLE--PDLMADELIDYCAQSRAFMPHFHIPLQSGSDEVL 285

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+++ S     IH  + + P   +  D++     +    +E   +   S  V  L 
Sbjct: 286 KLMHRHYDTSLFADKIHHIKEVMPHAFIGVDVMVGCRGEKPEYFEESYEFIRSLDVTQLH 345

Query: 204 LYQLTIEKGTLFYKMHK---DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT    +     + D  L S+ +       T +  + +     E+       
Sbjct: 346 VFPYSERPGTRALSIPYVVSEHDKKLRSKRLLQLSDEKTHAFYAKYVGQEAEVLFEKANR 405

Query: 261 AESLH--NLNYWR 271
             ++H    NY R
Sbjct: 406 GRAMHGFTRNYIR 418


>gi|222151684|ref|YP_002560840.1| hypothetical protein MCCL_1437 [Macrococcus caseolyticus JCSC5402]
 gi|222120809|dbj|BAH18144.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 314

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 56/165 (33%), Gaps = 3/165 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           + ++ +       +   V ++I   P  +  +  +   +        + LG+Q++ E++ 
Sbjct: 104 LEVLKEKYEAALAIPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWVELGLQTVHEKTS 163

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R H+       +   R     +   +I  LP +         +      V  + ++
Sbjct: 164 NIINRAHDMQCYYDGVAKLRKHNINICTHIINGLPLEDYDMMMETARVVSQMDVQGIKIH 223

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + KGT   K ++ G L    +   V L      I     +  
Sbjct: 224 LLHLLKGTPMVKQYEKGMLEFMDQETYVKLVADQLEILPEEMIIH 268


>gi|254470768|ref|ZP_05084171.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudovibrio sp. JE062]
 gi|211959910|gb|EEA95107.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudovibrio sp. JE062]
          Length = 470

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                ++  + E + +    G R ++ +      + G  P 
Sbjct: 188 CDKFCTFC---VVPYTRGAEVSRKVEQIVMETERLAA-AGVREVTLLGQNVNAWHGEGP- 242

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQS 139
                    + + + +   +     +     +P  +E +    +R   +    + L VQS
Sbjct: 243 ---DGREWGLGELLFRLAKIDGIERLRYTTSHPRDMEDSLIAAHRDLDILMPYLHLPVQS 299

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             +  L+ + R H   +    I   R     ++   D I   P +T    +  L      
Sbjct: 300 GSDAILKAMNRKHTRDDYFRLIDRIREARDDIALSGDFIVGFPGETDQDHKDTLDLIRRV 359

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  ++ +   GT    + +  D
Sbjct: 360 TYGSAFSFKYSPRPGTPGATLEEQID 385


>gi|160939106|ref|ZP_02086457.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438069|gb|EDP15829.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
           BAA-613]
          Length = 459

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 74/234 (31%), Gaps = 21/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K+C YC            +   I+  + E + + +      I     +  +G     L
Sbjct: 168 CDKRCTYC---IIPYLRGPYRSVPIEQLVKEARQLAEAGVKELILVAQETTLYGRD---L 221

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
              + +  +L  +AK   +           P  +     +  R  +   N + + +Q   
Sbjct: 222 YGEKCLPRLLRELAKIPGIYWIR--IQYCYPEEITDELIETIRTEEKVCNYLDIPIQHAS 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ +GR  N  E +  I   R   P ++    LI   P +T +  E  +        
Sbjct: 280 DRILKRMGRRTNKEELMERIGKLRQEIPDIAIRTTLISGFPGETESDHEELMDFVNEMEF 339

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           + L ++  + E+ T               E V  +  +    +         E 
Sbjct: 340 ERLGVFAYSAEEDT-----PAFSYPDQVPEEVKEERRDEIMELQQDIAFEHCEN 388


>gi|84503500|ref|ZP_01001555.1| MiaB-like Radical SAM protein [Oceanicola batsensis HTCC2597]
 gi|84388178|gb|EAQ01131.1| MiaB-like Radical SAM protein [Oceanicola batsensis HTCC2597]
          Length = 417

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 76/208 (36%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    + + +  +  +++L   R  + +   G   +     
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPTGV-VVDQIKRLV-DRGFNEVVLTGVDLTSWGAD 199

Query: 87  --------QNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRIS 134
                     +  IL  +     +  +   +IEA+P+ +                +  + 
Sbjct: 200 LPATPRLGDLVRRILRLVPDLPRLRISSIDSIEADPALMEAIATEPRL-------MPHLH 252

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQ 192
           L +Q+ ++  L+ + R H   +AI     AR + P M    D+I   P +T   +E  L+
Sbjct: 253 LSLQAGDDMILKRMKRRHLRDDAIRFCEEARRLRPEMTYGADIIAGFPTETDEMFENSLR 312

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                 +  L ++  +   GT   +M +
Sbjct: 313 LIEECGLTWLHVFPYSPRPGTPAARMPQ 340


>gi|83949580|ref|ZP_00958313.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius nubinhibens
           ISM]
 gi|83837479|gb|EAP76775.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius nubinhibens
           ISM]
          Length = 440

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K C +C     V  Y  G E + +     +   R L   G R I+ +      + G  
Sbjct: 159 CDKFCAFC-----VVPYTRGAE-YSRPVKAVLDEARDLIERGVREITLLGQNVNAYHGEG 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGV 137
           P          +   I +   +     I     +P+ ++    +        +  + L V
Sbjct: 213 P----DGAEWGLARLIWELDKLDGLQRIRFTTSHPNDMDAALIEALGSCAKLMPYLHLPV 268

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R+H A   +  +   R   P +    D I   P++T   ++  L    
Sbjct: 269 QSGSDRILKRMNRSHTAESYLRLMEEIRAARPDIVLSGDFIVGFPEETEEDFQATLDLVE 328

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
           +    +   ++ +   GT   + 
Sbjct: 329 AVKYGYAYSFKYSTRPGTPAAER 351


>gi|240849891|ref|YP_002971280.1| RNA modification enzyme, MiaB family [Bartonella grahamii as4aup]
 gi|240267014|gb|ACS50602.1| RNA modification enzyme, MiaB family [Bartonella grahamii as4aup]
          Length = 458

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 5/139 (3%)

Query: 90  ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSLEEQSLR 146
             + D +     +     +     +P  ++ +    +R   +    + L VQS  ++ L+
Sbjct: 234 WRLGDLLYHLAKLDGLKRLRYTTSHPRDMDDSLIAAHRDLDMLMPYLHLPVQSGSDRILK 293

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R H +S  +  I   R   P ++F  D I   P +T   +E  ++            
Sbjct: 294 AMNRQHKSSHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKLIQQVQYSSAYS 353

Query: 205 YQLTIEKGTLFYKMHKDGD 223
           ++ +   GT+   M    D
Sbjct: 354 FKYSPRPGTVGATMKNHVD 372


>gi|228917403|ref|ZP_04080954.1| hypothetical protein bthur0012_46140 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228842245|gb|EEM87342.1| hypothetical protein bthur0012_46140 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +    + +    + +     V   V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNTHAPLEVLKEKFEPLLAEKDV---VGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|227872341|ref|ZP_03990694.1| possible tRNA 2-methylthioadenine synthetase [Oribacterium sinus
           F0268]
 gi|227841805|gb|EEJ52082.1| possible tRNA 2-methylthioadenine synthetase [Oribacterium sinus
           F0268]
          Length = 230

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 15/168 (8%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
              +L  IAK   +       +  NP        Q  ++     N I L +QS     L+
Sbjct: 9   FPELLAKIAKLPGLKRLRF--MTPNPKDFSDELLQVMKENENICNHIHLPLQSGSTAILK 66

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R+++    +A +   R + P +S   D+I   P +T   ++  ++       D    
Sbjct: 67  RMNRHYSKESYMALVKKIREVLPDVSLTTDIIVGFPGETEEDFQDTMEVVAYSKFDSAFT 126

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +Q +   GT   K     +           +    Q +     LH+ E
Sbjct: 127 FQYSKRTGTPAAKWEAVPED---------VVKERFQRLLEHIRLHSEE 165


>gi|241068677|ref|XP_002408506.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215492494|gb|EEC02135.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 446

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G    + 
Sbjct: 162 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKGPADKIF 221

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLGVQSL 140
              ++   L  I     +       I+ N   +                +  + L VQS 
Sbjct: 222 SLADLLKHLAQIPNLERLRYTTSHPIDMNDDLIKLHGTEPKL-------MPFLHLPVQSG 274

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R H+       I+  R   P +  S D I   P +T   +E  L       
Sbjct: 275 SNKILKSMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVK 334

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT            + SE + +    L     + +
Sbjct: 335 YGQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQKELMAQQLAFN 382


>gi|253702142|ref|YP_003023331.1| radical SAM protein [Geobacter sp. M21]
 gi|251776992|gb|ACT19573.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 488

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 16/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C      +R    ++   +     ++ M  L     +S        P+  + +
Sbjct: 211 CDMECAFCS-----QRMFWREDWRCRKPEKVIEEMVHLIDEYGVSFFTLIDAYPT--KHR 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               +   +     +   V + IE     +  + +    YR AG+  + LG +S ++  L
Sbjct: 264 ERWELFLDLVIERKL--GVHLLIETRVEDIIRDRDILHKYRDAGIIHVYLGAESADKDVL 321

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH---- 201
             L +  +  +   A+ L R          +   P +T    +  +  A+    D     
Sbjct: 322 GSLNKGTSFEQNKEALDLLREAQIITEASFMIGFPTETWDSIQNTIDSAIYLNPDIAVFP 381

Query: 202 -LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            ++    T     +  ++              V+ Y +T    +A     Y
Sbjct: 382 VVTPMPFTPIHAQMKERIRVFDYAKYNLVCPIVEPYQMTMDEITAALGKCY 432


>gi|159045177|ref|YP_001533971.1| putative anaerobic magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase [Dinoroseobacter shibae DFL 12]
 gi|157912937|gb|ABV94370.1| putative anaerobic magnesium-protoporphyrin IX monomethyl ester
           [oxidative] cyclase [Dinoroseobacter shibae DFL 12]
          Length = 547

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 22/210 (10%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  ++  +  +  +  L    
Sbjct: 186 YIYVPLGVKVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPIKVVDEIENLVDNH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN--FQGYRK 127
            +         P++   + I    + IA+   +   ++  I    + +  +      YRK
Sbjct: 240 GVGFFILADEEPTINRRKFIQFCEELIAR--GLPEKIQWGINTRVTDIMRDKELLPLYRK 297

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  +SLG ++  +  L    +     E   AI L R          I  L  +T    
Sbjct: 298 AGLVHVSLGTEAAAQLKLDQFNKETKVEENKEAIRLLREADIFTEAQFIVGLDNETAETL 357

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           E   Q A  +  D  +    T    T  ++
Sbjct: 358 EETFQMAWDWQPDLANWAMYTPWPFTPLFQ 387


>gi|303247905|ref|ZP_07334173.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302490806|gb|EFL50707.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 532

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 9/197 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC+  +    +  G   + +  S    M  +R++T               +   
Sbjct: 226 CPHGCAYCNVPTVKTLFAGGGTPYFRNRSVDHVMAELREITARYPFIE-GIQLFDDTFFS 284

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +     L   A ++     + +  +A+P+++  +       AG+  + +G+QS   +  
Sbjct: 285 RR--MDWLAAFAASYKKDIGLPLFCQASPTTLSADKLDLLIDAGLCYVEMGIQSGSPKIK 342

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRM---SFDLIYALPKQTMTQWEMELQRALSY-AVDH 201
           R   R+ +    +A   L      ++    + +I   P +T       ++          
Sbjct: 343 RLFRRSESEDTVLAGARLLHERRGKLLTPDYHVIIDSPWETEEDLLETVRLLAKLPKPFG 402

Query: 202 LSLYQLTIEKGTLFYKM 218
           L++  L     T  Y++
Sbjct: 403 LAIASLVYFPETELYRL 419


>gi|220932005|ref|YP_002508913.1| RNA modification enzyme, MiaB family [Halothermothrix orenii H 168]
 gi|219993315|gb|ACL69918.1| RNA modification enzyme, MiaB family [Halothermothrix orenii H 168]
          Length = 450

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 68/201 (33%), Gaps = 16/201 (7%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-- 82
              C   C YC     +  Y  G+E    +    +   R+L           G    S  
Sbjct: 156 IQGCNNFCTYC-----IVPYVRGRERSRPA-ADIISEARKLASEGVKEITLLGQNVNSYG 209

Query: 83  --LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L E  + A +L  + +   +       + ++P        +  ++         L VQ
Sbjct: 210 KDLKEDIDFADLLKRLNRVEGIKRIRY--MTSHPRDFSDKMIKIIKECDKVCEHFHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +  +E +  I   ++  P  S   D+I   P +T   ++  L+    
Sbjct: 268 SGSTRILKKMNRGYTQAEYLNLIKKIKSQIPDYSITTDIIVGFPGETEEDFQETLKVIRE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYK 217
              D    ++ +  KGT   +
Sbjct: 328 VRFDMAYTFKYSPRKGTPAAR 348


>gi|291542169|emb|CBL15279.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
           bromii L2-63]
          Length = 446

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 71/226 (31%), Gaps = 14/226 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC       R++      I+  + E + + +    R +  +       +     
Sbjct: 155 CDNRCSYCAIPMIRGRFRSRD---IEDVVKEAEGLAE----RGVKELNVIAQDTTRFGED 207

Query: 88  NIAL--ILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + + +   +        +   P  +              V  + + +Q  + 
Sbjct: 208 KYGKPMLAELLRRLCRIDGFKWIRVLYCYPDRITDELIDTIAGEDKIVKYMDIPLQHCDG 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             LR + R+ +     A ++  ++  P + F    I   P +T  Q+    + A      
Sbjct: 268 DVLRRMNRHGDRESLTALMNKIKDKIPNVIFRSTFITGFPGETEEQFNELAEFAADMKFQ 327

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            L  +  + E+ T   +M    D  +  +   + + +  Q +    
Sbjct: 328 RLGCFAYSPEEDTKAAEMPDQIDEEIKQKRADIIMEHQQQVMAEYC 373


>gi|312115216|ref|YP_004012812.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220345|gb|ADP71713.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodomicrobium vannielii ATCC 17100]
          Length = 608

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 8/190 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      R Y+V +   +   + E++    L    ++         P++    
Sbjct: 204 CPFTCSFCSQWKFWRDYRVRKPKLV---VDEIET---LVRDHNVGFFILADEEPTINRKA 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A   + I +   V   +   +       + +    YRKAG+  ISLG ++  + +L  
Sbjct: 258 FVAFCEELIERKLPVLWGINTRVTDILR--DEDLLPMYRKAGLVHISLGTEAAAQLNLDL 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     +   AI L R          I  L  +T+   E   +    +  D  +    
Sbjct: 316 FNKETTVGQNKKAIDLLRANGIVTEAQFIVGLDNETLETLEETYKMVREWNPDMANWSMF 375

Query: 208 TIEKGTLFYK 217
           T    +  Y+
Sbjct: 376 TPWPFSDLYR 385


>gi|157363409|ref|YP_001470176.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
 gi|157314013|gb|ABV33112.1| Radical SAM domain protein [Thermotoga lettingae TMO]
          Length = 383

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 1/105 (0%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
              +  P  V     +  +K   NR I LG QS  ++ LR + R H     + +  +  N
Sbjct: 231 FPSDVRPEFVTDEVLKTIKKYVNNRYIILGAQSGSDRVLRLIKRFHTVEHVVRSAEIVLN 290

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
                  D+I+  P +                     ++  T   
Sbjct: 291 NGFVPRVDIIFGFPFENEDDLAKTFDLIKKLVKMGCKIHAHTFMP 335


>gi|78188191|ref|YP_378529.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
           chlorochromatii CaD3]
 gi|123770899|sp|Q3AU39|MIAB_CHLCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78170390|gb|ABB27486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium
           chlorochromatii CaD3]
          Length = 449

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            + +   + L E++ + +  G R I+ +  G    S  +P 
Sbjct: 163 CNNHCAYC---VVPLTRGRERSHPKAAVLNEVRQLAE-AGYREITLL--GQNVNSYYDPL 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                 + +A     +    I     +P  +     +   +     N I L VQS   + 
Sbjct: 217 AQCNFAELLAAVSCAAPATRIRFTTSHPKDISEALVRTIAEHSNICNHIHLPVQSGSSRI 276

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R H   E +  I L R++ P +  S D+I     +T    +  L+       D  
Sbjct: 277 LRLMQRGHTIEEYLEKIALIRSLIPNVTLSTDMIAGFCGETEADHQATLRLLEEVQFDSA 336

Query: 203 SLYQLTIEKGTL 214
            ++  +    T 
Sbjct: 337 FMFYYSPRPRTP 348


>gi|312128718|ref|YP_003993592.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778737|gb|ADQ08223.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 351

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N   +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNRQAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
               ++  I+        + S+V++ I  +      + ++ ++ AG +R  +  ++  E+
Sbjct: 114 YNKDSLCSII------RKIKSSVDVAITLSIGERSYDEYKAFKDAGADRFLMRFETSNEK 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R      +    I  +   +N+   +    +  LP QT+     ++        D + 
Sbjct: 168 LYRKYHPGMSFENRIECLKWIKNLGYELGTGFLIGLPGQTIDDLAQDILLVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|310828246|ref|YP_003960603.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
           KIST612]
 gi|308739980|gb|ADO37640.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
           KIST612]
          Length = 439

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 22/202 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C YC    + R  +V ++         ++ + +L     +     G    S     
Sbjct: 158 CNNFCTYC-IVPYTRGREVSRQP-----EKIIEEVTRLADEGCLEVTLLGQNVNSYGNDL 211

Query: 87  ------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                  ++   L+ I K   +       + ++P  +     +   +       I L +Q
Sbjct: 212 KTGYHFADLLRDLNQIEKIKRIR-----FMTSHPKDLTDEVIEAIAQCDKVCPAIHLAIQ 266

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +   + I  +   R+  P ++   D+I   P +T   ++  L+   +
Sbjct: 267 SGSTRVLKAMNRRYTKEQIIDLVDKVRSRIPDVAITTDIIVGFPGETEEDFQDTLEVMRA 326

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
              D    +  +I  GT    M
Sbjct: 327 CKFDSAFSFIYSIRTGTPAATM 348


>gi|170758363|ref|YP_001788268.1| RNA modification protein [Clostridium botulinum A3 str. Loch Maree]
 gi|169405352|gb|ACA53763.1| RNA modification enzyme, MiaB family [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 432

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTP 81
           C + C YC   F       K  +          M+ +++L+        +S I       
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPE--------KIMEEVQKLSKHGFKEIILSGIDIASYGF 203

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQ 138
            L    N+  IL+ I K   +      +I  +P+             ++       L +Q
Sbjct: 204 DLEGKYNLTSILEEIDKVEGIQRIRIGSI--DPTFFTEEEIMRISKLKRF-CPHFHLSLQ 260

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   ++L+ + R +   +    +H  R     +S   D+I   P +T  ++    +    
Sbjct: 261 SGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRD 320

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +  + +++ +  KGT   +M    D
Sbjct: 321 IKLSKMHVFKFSPRKGTRAEEMKNQVD 347


>gi|167579900|ref|ZP_02372774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis TXDOH]
          Length = 457

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                IA     I     +     I     +P          Y K    V+ + L VQ  
Sbjct: 213 -GAHEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      +
Sbjct: 272 SDRILMAMKRGYTVLEYKSLIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALVHEMS 331

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D    +  +   GT    +
Sbjct: 332 YDTSFSFIYSPRPGTPAANL 351


>gi|149928259|ref|ZP_01916503.1| hypothetical protein LMED105_15758 [Limnobacter sp. MED105]
 gi|149823065|gb|EDM82306.1| hypothetical protein LMED105_15758 [Limnobacter sp. MED105]
          Length = 404

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 15/203 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTPSLI 84
           C  YC F                  L E+  +            +++++     G  S  
Sbjct: 116 CSKYCSFCVVPYTRGEEISRPFDDVLVEIADLADQGVREINLLGQNVNAYRGKMGDTS-- 173

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + AL+L+ +++   +      T  ++P        Q Y K    V+ + L VQ+  +
Sbjct: 174 EIADFALLLEYVSEVPGIERIRFTT--SHPKEFGPRLIQAYAKLPKLVDHLHLPVQAGSD 231

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I   R I P +S   D I   P ++   +E  +    +   D
Sbjct: 232 RILSAMKRGYTALEYKSIIRKLREIRPNISMSSDFIVGFPGESEADFEKTMDLINAVGFD 291

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
               +  +   GT    +    D
Sbjct: 292 TSFSFVYSPRPGTPAADLEDGVD 314


>gi|161523785|ref|YP_001578797.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           multivorans ATCC 17616]
 gi|189351454|ref|YP_001947082.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           multivorans ATCC 17616]
 gi|221200110|ref|ZP_03573153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           CGD2M]
 gi|221206737|ref|ZP_03579749.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           CGD2]
 gi|229890459|sp|A9AFF8|MIAB_BURM1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|160341214|gb|ABX14300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           ATCC 17616]
 gi|189335476|dbj|BAG44546.1| bifunctional enzyme [Burkholderia multivorans ATCC 17616]
 gi|221173392|gb|EEE05827.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           CGD2]
 gi|221180349|gb|EEE12753.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           CGD2M]
          Length = 457

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEVADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S DLI   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEEDFDKMMALVHDM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 RYDTSFSFIYSPRPGTPAANLH 352


>gi|83719624|ref|YP_441148.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           thailandensis E264]
 gi|167617973|ref|ZP_02386604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis Bt4]
 gi|257140190|ref|ZP_05588452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis E264]
 gi|123537978|sp|Q2T101|MIAB_BURTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83653449|gb|ABC37512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis E264]
          Length = 457

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                IA     I     +     I     +P          Y K    V+ + L VQ  
Sbjct: 213 -GAHEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      +
Sbjct: 272 SDRILMAMKRGYTVLEYKSLIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALVHEMS 331

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D    +  +   GT    +
Sbjct: 332 YDTSFSFIYSPRPGTPAANL 351


>gi|218231844|ref|YP_002369547.1| conserved hypothetical protein TIGR01212 [Bacillus cereus B4264]
 gi|228941930|ref|ZP_04104474.1| hypothetical protein bthur0008_45650 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974861|ref|ZP_04135423.1| hypothetical protein bthur0003_46120 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981454|ref|ZP_04141752.1| hypothetical protein bthur0002_46150 [Bacillus thuringiensis Bt407]
 gi|229019985|ref|ZP_04176775.1| hypothetical protein bcere0030_44830 [Bacillus cereus AH1273]
 gi|229026220|ref|ZP_04182580.1| hypothetical protein bcere0029_44980 [Bacillus cereus AH1272]
 gi|229112213|ref|ZP_04241753.1| hypothetical protein bcere0018_44550 [Bacillus cereus Rock1-15]
 gi|218159801|gb|ACK59793.1| conserved hypothetical protein TIGR01212 [Bacillus cereus B4264]
 gi|228671197|gb|EEL26501.1| hypothetical protein bcere0018_44550 [Bacillus cereus Rock1-15]
 gi|228735066|gb|EEL85701.1| hypothetical protein bcere0029_44980 [Bacillus cereus AH1272]
 gi|228741306|gb|EEL91516.1| hypothetical protein bcere0030_44830 [Bacillus cereus AH1273]
 gi|228778279|gb|EEM26548.1| hypothetical protein bthur0002_46150 [Bacillus thuringiensis Bt407]
 gi|228784865|gb|EEM32882.1| hypothetical protein bthur0003_46120 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817763|gb|EEM63844.1| hypothetical protein bthur0008_45650 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326942535|gb|AEA18431.1| Fe-S oxidoreductase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|84688004|ref|ZP_01015867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84663985|gb|EAQ10486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2654]
          Length = 443

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 17/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F               +  L E + + +  G R I+    ++    G    
Sbjct: 163 CDK---FCAFCVVPYTRGAEVSRPPERILREARELVER-GVREITLLGQNVNAYHGA--- 215

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                   +   I     +     I     +P+ +  +    + +    +  + L VQS 
Sbjct: 216 -GDGGDWSLARLIWALNDIDGLERIRFTTSHPNDMSDDLIAAHGECAKLMPYLHLPVQSG 274

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A E +  I   R   P   +S D I   P++T   +E  L    +  
Sbjct: 275 SDRILKRMNRKHTAEEYLRLIERIRAARPDILISGDFIVGFPEETDRDFEDTLDLIRAVN 334

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT   +     +
Sbjct: 335 YGQAFSFKYSSRPGTPAAERPLVDE 359


>gi|270263724|ref|ZP_06191993.1| hypothetical protein SOD_e03490 [Serratia odorifera 4Rx13]
 gi|270042608|gb|EFA15703.1| hypothetical protein SOD_e03490 [Serratia odorifera 4Rx13]
          Length = 497

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 68/227 (29%), Gaps = 16/227 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTP---S 82
           C K C +C       R +              Q   Q     ++   ++    G      
Sbjct: 180 CNKYCTFC--VVPYTRGEEVSRPSDDVLFEIAQLAAQGVREVNLLGQNVNAYRGATYDGG 237

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  ++  I        +      ++P     +    Y+     V+ + L VQS 
Sbjct: 238 ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIAVYQDTPELVSFLHLPVQSG 292

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  +       
Sbjct: 293 SDRILTMMKRAHTALEYKAIIRKLRKARPNIQLSSDFIIGFPGETQADFEQTMNLVAEIN 352

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            D    +  +   GT    M  D       + + +    + Q +   
Sbjct: 353 FDASFSFIYSSRPGTPAADMVDDVSEDEKKQRLYILQDRINQQVLQF 399


>gi|258516338|ref|YP_003192560.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780043|gb|ACV63937.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 552

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 75/206 (36%), Gaps = 11/206 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   CPYC  +S ++++          +   +Q + ++          F       +  +
Sbjct: 201 CTNACPYCT-SSFIKKHV--------RYRDCVQIISEIEQAYKAGFRKFYFVDDVFLNNK 251

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +++   +      ++     +    ++       + AG   I+ G++++ + +L  
Sbjct: 252 PL--VIEVCREIVNNKFDITWPCMSRIDHIDEETLYWMKLAGCEIIAFGIETVSQNTLEQ 309

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +G++  + +        +    R    +++ +P  T+    + +        D + ++  
Sbjct: 310 IGKSDLSDKIQNTFATVKKHGIRALAFVMFGMPLSTLRDELLTINFLSRLQPDAIGVFSF 369

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAV 233
               GT++Y   +   L +   N++ 
Sbjct: 370 KPYPGTVYYFDPEKYGLNITDRNLSR 395


>gi|76666843|emb|CAJ31220.1| Radical SAM superfamily [uncultured sulfate-reducing bacterium]
          Length = 427

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 12/173 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C   +     +  Q N I   L E+ ++ +    R           P+     
Sbjct: 191 CPHSCVFC--YTPAAFDRRIQYNSIDRVLEEIAYVAERGTGRLWF------ADPNFSFSE 242

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  IL+GI         VE+ +E     +     +  ++AGV  +++G++S       
Sbjct: 243 KRVIGILEGILSRNL---EVEMWVETRADMLTAELIRLMKRAGVYLVAMGLESASPNVYP 299

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            L +N    E   A  LA      +     +ALP + +      LQ      V
Sbjct: 300 GLNKNLQPEEIREAARLALEAGLDVELFSQFALPNEKLEDAMATLQFVKDCGV 352


>gi|218899905|ref|YP_002448316.1| hypothetical protein TIGR01212 [Bacillus cereus G9842]
 gi|228903271|ref|ZP_04067403.1| hypothetical protein bthur0014_44360 [Bacillus thuringiensis IBL
           4222]
 gi|228967855|ref|ZP_04128867.1| hypothetical protein bthur0004_46440 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|229032407|ref|ZP_04188377.1| hypothetical protein bcere0028_44480 [Bacillus cereus AH1271]
 gi|218540795|gb|ACK93189.1| conserved hypothetical protein TIGR01212 [Bacillus cereus G9842]
 gi|228728909|gb|EEL79915.1| hypothetical protein bcere0028_44480 [Bacillus cereus AH1271]
 gi|228791821|gb|EEM39411.1| hypothetical protein bthur0004_46440 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228856372|gb|EEN00900.1| hypothetical protein bthur0014_44360 [Bacillus thuringiensis IBL
           4222]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|218905983|ref|YP_002453817.1| conserved hypothetical protein TIGR01212 [Bacillus cereus AH820]
 gi|218535857|gb|ACK88255.1| conserved hypothetical protein TIGR01212 [Bacillus cereus AH820]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 19/202 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF          +++ I  +    + MR         + +F   T +   
Sbjct: 54  CTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA-YFQAYTNTHAP 106

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
            + +    + +     V   V ++I   P  +  +         K     + LG+Q++ E
Sbjct: 107 LEVLKEKFEPLLAEKDV---VGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHE 163

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++   + R H+    +  ++  R    R+   +I  LP +         +      +  +
Sbjct: 164 RTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGI 223

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
            ++ L + KGT   K ++ G L
Sbjct: 224 KIHLLHLLKGTPMVKQYEKGQL 245


>gi|319764320|ref|YP_004128257.1| tRNA-i(6)a37 thiotransferase enzyme miab [Alicycliphilus
           denitrificans BC]
 gi|330826382|ref|YP_004389685.1| MiaB family RNA modification protein [Alicycliphilus denitrificans
           K601]
 gi|317118881|gb|ADV01370.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alicycliphilus
           denitrificans BC]
 gi|329311754|gb|AEB86169.1| RNA modification enzyme, MiaB family [Alicycliphilus denitrificans
           K601]
          Length = 449

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 11/224 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC       R +     F    +       Q     ++          ++    
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYLGTMGDTA 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + AL+L+ +A+   +      T  ++P+       + Y +    V+ + L VQ   +
Sbjct: 213 EKADFALLLEYVAEIPGIERIRYTT--SHPNEFTPRLIEAYARIPKLVSHLHLPVQHGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + +    A      MS D I   P +T   ++  ++       D
Sbjct: 271 RILMAMKRGYTAMEYKSTVRKLKAIRPGMAMSSDFIVGFPGETEEDFQKMMKLIHDVRFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +   +  +   GT    +H D    +    +      + ++I  
Sbjct: 331 NSFSFIFSPRPGTPAANLHDDTPHDVKLRRLQELQAVINRNILE 374


>gi|228955030|ref|ZP_04117046.1| hypothetical protein bthur0006_43950 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229072255|ref|ZP_04205461.1| hypothetical protein bcere0025_44190 [Bacillus cereus F65185]
 gi|229082007|ref|ZP_04214496.1| hypothetical protein bcere0023_46340 [Bacillus cereus Rock4-2]
 gi|228701306|gb|EEL53803.1| hypothetical protein bcere0023_46340 [Bacillus cereus Rock4-2]
 gi|228710863|gb|EEL62832.1| hypothetical protein bcere0025_44190 [Bacillus cereus F65185]
 gi|228804656|gb|EEM51259.1| hypothetical protein bthur0006_43950 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|254509287|ref|ZP_05121379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           16]
 gi|219547775|gb|EED24808.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Vibrio parahaemolyticus
           16]
          Length = 461

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 144 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 197

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 198 HDGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T    +  ++       
Sbjct: 258 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDHQDTMKLIKDVDF 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q+I +    ++
Sbjct: 318 DMSFSFIFSPRPGTPAA----DYPCDVPEQEKKERLYELQQTINAQAMRYS 364


>gi|331269617|ref|YP_004396109.1| MiaB family RNA modification protein [Clostridium botulinum
           BKT015925]
 gi|329126167|gb|AEB76112.1| RNA modification enzyme, MiaB family [Clostridium botulinum
           BKT015925]
          Length = 444

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 81/270 (30%), Gaps = 35/270 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFG 77
           Y+     C   C YC      +     +   I S + E + +  +     I         
Sbjct: 148 YIRISEGCDNFCTYC---IIPKIRGKYRSRSIDSIVKEAKELSAMGVKELILVGQDTAIY 204

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G    +     +  ++  I++   +       +   P  +     +  +      N + +
Sbjct: 205 GRD--IYNENKLPELIRAISEIEAIEWIR--VLYTYPEEITDELIEEIKSNDKVCNYLDI 260

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q +    L+ + R          I   R+    +     +I   P +T  ++    + 
Sbjct: 261 PIQHVSNTVLKRMNRRSTKEIISENIRKMRSEIKDLCLRTSIIVGFPGETEDEFNELKEF 320

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D+L +++ + E+ T   +M                   L QS      +   ++
Sbjct: 321 IKEIKFDNLGVFKYSQEEDTAAARMKDQISE------------ELKQSRLEELMIIQQQV 368

Query: 254 S---NHSFLGAESL-----HNLNYWRYGDY 275
           S   N + +G         HN  YW   +Y
Sbjct: 369 SKEKNKNKIGKVYKVLIEGHNDEYWIGRNY 398


>gi|288560799|ref|YP_003424285.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase BchE [Methanobrevibacter ruminantium M1]
 gi|288543509|gb|ADC47393.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase BchE [Methanobrevibacter ruminantium M1]
          Length = 503

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 8/221 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C + S     ++ +   +     E +++ +      I  IF    T ++ +P 
Sbjct: 228 CPNQCNFCSYPS-TMGGRIYRTRSVTDLADEFEYILKELP--EIKEIFIEDDTFTVNQP- 283

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +++   +          +       +     +  + AG   +  G +S  +  L  
Sbjct: 284 ---RVIEFCDEIIKRGLKPIWSCNTRVD-LTYETMKKMKDAGCRLLVCGYESGNQDVLNE 339

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     ++ A    AR +  ++    +  L   ++   +   + A S   D     Q 
Sbjct: 340 TKKGITLEQSRAFAENARKLDIKVFGCFMIGLTGDSLETIDETYKFAQSVYPDMCFFQQA 399

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
               GT FY   K+   ++  +       +   +    +  
Sbjct: 400 VPFPGTGFYDWAKENGYLITEDYSKWLNEDRYLNCLVDYPY 440


>gi|229105385|ref|ZP_04236030.1| hypothetical protein bcere0019_45190 [Bacillus cereus Rock3-28]
 gi|228678042|gb|EEL32274.1| hypothetical protein bcere0019_45190 [Bacillus cereus Rock3-28]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHAKWKDGKCIAYFQAYTNT---HAPLEVL 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +  +         K     + LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|229152948|ref|ZP_04281130.1| hypothetical protein bcere0011_44800 [Bacillus cereus m1550]
 gi|228630561|gb|EEK87208.1| hypothetical protein bcere0011_44800 [Bacillus cereus m1550]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 19/202 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF          +++ I  +    + MR         + +F   T +   
Sbjct: 54  CTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA-YFQAYTNTHAP 106

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEE 142
            + +    + +     V   V ++I   P  +            K     I LG+Q++ E
Sbjct: 107 LEVLKEKFEPLLAEKDV---VGLSIATRPDCLPDDVVEYLADLNKRTYLWIELGLQTVHE 163

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++   + R H+    +  ++  R    R+   +I  LP +         +      V  +
Sbjct: 164 RTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGI 223

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
            ++ L + KGT   K ++ G L
Sbjct: 224 KIHLLHLLKGTPMVKQYEKGQL 245


>gi|251778917|ref|ZP_04821837.1| radical SAM domain protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083232|gb|EES49122.1| radical SAM domain protein [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 348

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 92/258 (35%), Gaps = 36/258 (13%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++ +E  I           +        +I   GG     
Sbjct: 60  CKRNCLYCGLRRDNKNIKRYRLSKEEIID--------FAKKAVSYGYKTIVLQGGEDDFF 111

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I        N+ + +  +        ++ +++AG +R  L +++ +++ 
Sbjct: 112 TKEKMVEIVKEIK-------NLNVALTLSLGEKTYEEYKAFKEAGADRYLLRIETTDKKL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +    +  E +  +    ++   +   ++  LP QT+     ++        D + +
Sbjct: 165 YEEMDPMMSYGERLKCLENLGDLDYEIGTGVLVGLPNQTLESLADDILFFKKLNADMIGI 224

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
                 + T         D    + N+A+ +  +T+ +     +        +    ESL
Sbjct: 225 GPFIPNEDTPL------KDSQGGNLNLALKVMAITRLLLPDINIP-------ATTAMESL 271

Query: 265 HNLNYWRYGDYIGIGPGA 282
           H     + G  + +  GA
Sbjct: 272 H-----KNGRILALQSGA 284


>gi|254442609|ref|ZP_05056085.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Verrucomicrobiae
           bacterium DG1235]
 gi|198256917|gb|EDY81225.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Verrucomicrobiae
           bacterium DG1235]
          Length = 461

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 13/231 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C       R +    +  +   +   +  ++++T    I + +     P +  
Sbjct: 171 CNMNCAFCIVPKTRGRERARPIQEIVDEVIGLAESGVKEITLLGQIVTSYGRRDFPVVNG 230

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 +L+ I +   +          +P   + +  + YR        + L +Q+   +
Sbjct: 231 KSPFVQLLEKIEEIPGIERIRF--TSPHPRGFKQDLVEAYRDLSKLCEYVHLPLQAGCNK 288

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +LR + R +        +    A       S D+I   P +T   +          A D 
Sbjct: 289 TLRAMNRPYTKERYREIVDSLRAMVPSMYFSTDIIVGFPGETEADFNETAAMFDDIAFDM 348

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             +++ +I  GT    M          +        +   +   H L   E
Sbjct: 349 AYIFKYSIRTGTPAETMPDQI-----PQEEKERRNQVLLDLLHKHSLARNE 394


>gi|229076260|ref|ZP_04209227.1| hypothetical protein bcere0024_44580 [Bacillus cereus Rock4-18]
 gi|229099230|ref|ZP_04230162.1| hypothetical protein bcere0020_44510 [Bacillus cereus Rock3-29]
 gi|228684211|gb|EEL38157.1| hypothetical protein bcere0020_44510 [Bacillus cereus Rock3-29]
 gi|228706909|gb|EEL59115.1| hypothetical protein bcere0024_44580 [Bacillus cereus Rock4-18]
          Length = 319

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHAKWKDGKCIAYFQAYTNT---HAPLEVL 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +  +         K     + LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +A ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVAGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|163734417|ref|ZP_02141857.1| MiaB-like tRNA modifying enzyme, hypothetical [Roseobacter
           litoralis Och 149]
 gi|161392425|gb|EDQ16754.1| MiaB-like tRNA modifying enzyme, hypothetical [Roseobacter
           litoralis Och 149]
          Length = 417

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 27/209 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVAAGV-VIDQIKRLVDKGFNEVVLTGVDLTSWGADL 200

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISL 135
                    +  IL  +     +  +   +IE + + +                +  + L
Sbjct: 201 PAAPKLGDLVMRILRLVPDLPRLRISSIDSIEVDENLMLAIATEPRL-------MPHLHL 253

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L  
Sbjct: 254 SLQHGDDMILKRMKRRHLRDDAIRFAQDARRLRPDMTFGADIIAGFPTETDAMFENSLAL 313

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                +  L ++  +   GT   +M    
Sbjct: 314 VQECDLTWLHVFPYSARPGTPAARMPAVH 342


>gi|89894341|ref|YP_517828.1| hypothetical protein DSY1595 [Desulfitobacterium hafniense Y51]
 gi|123091791|sp|Q24X58|MIAB_DESHY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|89333789|dbj|BAE83384.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 447

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 17/228 (7%)

Query: 8   ENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
           + ++       L  YV+  + C   C YC    HVR  +  ++   +  L E++ + + T
Sbjct: 141 QESVLLAAKGKLKAYVNISYGCNNFCTYC-IVPHVRGRERSRQP--EEILAEIRALVE-T 196

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI----TIEANPSSVEVNNF 122
           G R ++ +  G    S    Q++    D       V S   +     + ++P  +     
Sbjct: 197 GCREVTLL--GQNVNSY--GQDLDRAYDFADLLKDVDSIDGLWRVRFMTSHPKDLSDKLI 252

Query: 123 QGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
           +           I L  Q+  ++ L+ + R +     ++ I   + I P++S   D+I  
Sbjct: 253 ETIAAGTHLCEHIHLPFQAGSDEILKGMNRKYTREYYLSRIAQIKVIIPQVSLTTDIIVG 312

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            P +T   +E  L+            +  +   GT   +M +   L +
Sbjct: 313 FPGETEEDFEQTLELIRQVRYSQAFTFMYSKRSGTPAAQMAEQIPLDI 360


>gi|269837050|ref|YP_003319278.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786313|gb|ACZ38456.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus
           DSM 20745]
          Length = 460

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C   C YC       R    +   +   + E++ + +  G + ++ +      +G   P 
Sbjct: 168 CNFVCSYC---IVPYRRGRERSRPMAEVIAEVERLAER-GVKEVTLLGQTVNAYGHDLPG 223

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P  +A +L  + +   +       + ++P  +     Q           I+L VQ+ 
Sbjct: 224 --SPD-LADLLTAVNEIPGIERIRF--LTSHPKYMSDRIVQAVATLPKACEHINLPVQAG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++ LR + R +        I   R   P   +S D+I   P +T  Q++  L       
Sbjct: 279 DDEVLRRMRRTYTVDFYRERIAYIRETIPGVTVSTDIIVGFPGETEEQFQRTLDLLAELR 338

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +D + +   +    TL  +   D                  Q
Sbjct: 339 LDKVHVAMYSPRPRTLSARWEDDIPWDEKRRRHQAVEKLQAQ 380


>gi|170756026|ref|YP_001782588.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
 gi|169121238|gb|ACA45074.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
           Okra]
          Length = 432

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC   F       K  ++          +  +       +S I        L  
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPEKIM----EEVEKLSKHGFKEIILSGIDIASYGFDLEG 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
             N+  IL+ I +   +      +I  +P+             ++       L +QS   
Sbjct: 208 KYNLTSILEEIDRVEGIERIRIGSI--DPTFFTEEEIIRISKLKRF-CPHFHLSLQSGCN 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           ++L+ + R +   +    +H  R     +S   D+I   P +T  ++    +      + 
Sbjct: 265 ETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLRDIKLS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            + +++ +  KGT    M    D
Sbjct: 325 KMHVFKFSPRKGTRAEGMKNQVD 347


>gi|89891819|ref|ZP_01203321.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BBFL7]
 gi|89515974|gb|EAS18639.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BBFL7]
          Length = 490

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  +  +            N I L VQS  ++ L+ + R H   E +  I     I P
Sbjct: 274 SNPQDISDDVLHAIANHRNICNYIHLPVQSGSDRILKEMNRLHTREEYMRLIDRVHTIIP 333

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              +S D+I   P +T    +  L        D+  ++  +   GT+  +  
Sbjct: 334 ECAVSQDMITGFPTETEEDHQDTLSLMEYVKYDYGFMFAYSERPGTMAARKM 385


>gi|15599175|ref|NP_252669.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           aeruginosa PAO1]
 gi|107103498|ref|ZP_01367416.1| hypothetical protein PaerPA_01004568 [Pseudomonas aeruginosa PACS2]
 gi|116052019|ref|YP_789138.1| hypothetical protein PA14_12350 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889737|ref|YP_002438601.1| hypothetical protein PLES_09951 [Pseudomonas aeruginosa LESB58]
 gi|254236873|ref|ZP_04930196.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254242666|ref|ZP_04935988.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296387492|ref|ZP_06876967.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           aeruginosa PAb1]
 gi|313109420|ref|ZP_07795380.1| hypothetical protein PA39016_001790020 [Pseudomonas aeruginosa
           39016]
 gi|12230974|sp|Q51470|MIAB_PSEAE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|122261166|sp|Q02SE8|MIAB_PSEAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|9950171|gb|AAG07367.1|AE004816_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115587240|gb|ABJ13255.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168804|gb|EAZ54315.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126196044|gb|EAZ60107.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218769960|emb|CAW25722.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
 gi|310881882|gb|EFQ40476.1| hypothetical protein PA39016_001790020 [Pseudomonas aeruginosa
           39016]
          Length = 446

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 67/230 (29%), Gaps = 16/230 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F                  + E+  + +  G R ++ +         +      
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAE-NGVREVTLLGQNVNGFRGLTHDGRL 215

Query: 91  LILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
                + +       +E      ++P        Q + +    V  I L VQS  ++ L 
Sbjct: 216 ADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLA 275

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + RNH   E  + I   +   P +    D I   P +T   +E  ++       D    
Sbjct: 276 AMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEDVGFDFSFS 335

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  +   GT            L  +          Q + S      YEIS
Sbjct: 336 FIYSARPGTPAA--------DLADDLPEEVKKQRLQILQSRIHQQGYEIS 377


>gi|258513537|ref|YP_003189759.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777242|gb|ACV61136.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 349

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 72/196 (36%), Gaps = 17/196 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C ++C YC     N  V+RY++G+E+ + +    ++          + ++    G    
Sbjct: 66  YCCRQCHYCGLRSANKDVKRYRLGEEDILLAVRRAVK--------VGLKTVVLQSGEDRF 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I ++  ++      +  +      ++++  R+AG +R  L  ++ +E 
Sbjct: 118 YSLEQLVRIVRLIKQSTGMA------VTLSLGERSYSDYERLREAGADRYLLKQETSDEG 171

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L      +  +  +   + +   +    +  LP Q+      +L+      VD   
Sbjct: 172 LFVRLRPKTTLAGRVQCLKWLKELGFEIGSGNMVGLPGQSTGTLARDLELMRELDVDMAG 231

Query: 204 LYQLTIEKGTLFYKMH 219
           +        T    M 
Sbjct: 232 IGPFIAHPQTPLAGMP 247


>gi|37523584|ref|NP_926961.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Gloeobacter
           violaceus PCC 7421]
 gi|81708482|sp|Q7NE65|MIAB_GLOVI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|35214589|dbj|BAC91956.1| glr4015 [Gloeobacter violaceus PCC 7421]
          Length = 441

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 4/142 (2%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNI 167
           ++P            +         +  QS + + LR + R +   +  A I    A   
Sbjct: 239 SHPRYFSDELIATCAELPKVCEHFHIPFQSGDNEVLRRMARGYTHEKYRAIIEKIRAILP 298

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +S DLI   P +T  Q+E  L+       D L+    +   GT   +     D  + 
Sbjct: 299 DAAISADLIVGFPGETEAQFENSLRLVDELEFDALNTAAYSPRPGTPAARWPGQLDDEVK 358

Query: 228 SENVAVDLYNLTQSITSAHGLH 249
            + +      + Q        +
Sbjct: 359 QDRLQRTNRLVAQKAFERSQRY 380


>gi|163942479|ref|YP_001647363.1| putative radical SAM protein [Bacillus weihenstephanensis KBAB4]
 gi|229062436|ref|ZP_04199752.1| hypothetical protein bcere0026_45050 [Bacillus cereus AH603]
 gi|229135593|ref|ZP_04264373.1| hypothetical protein bcere0014_44840 [Bacillus cereus BDRD-ST196]
 gi|163864676|gb|ABY45735.1| conserved hypothetical radical SAM protein [Bacillus
           weihenstephanensis KBAB4]
 gi|228647866|gb|EEL03921.1| hypothetical protein bcere0014_44840 [Bacillus cereus BDRD-ST196]
 gi|228716907|gb|EEL68594.1| hypothetical protein bcere0026_45050 [Bacillus cereus AH603]
          Length = 319

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 TREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|90425295|ref|YP_533665.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisB18]
 gi|90107309|gb|ABD89346.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisB18]
          Length = 569

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 14/199 (7%)

Query: 25  WP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P     C   C +C       ++K  ++  ++     +  + +L     +         
Sbjct: 213 IPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIEELVNKYQVGFFILADEE 266

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P++   + I    + IA+   ++  V+  I    + +  +    + Y +AG+  +SLG +
Sbjct: 267 PTINRKKFIQFCEELIAR--GLNKKVQWGINTRVTDILRDEKLLKFYNEAGLMHVSLGTE 324

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  +  L    +    S+   AI L R          I  L  +T    E   + A+ + 
Sbjct: 325 AAAQLKLDLFNKETKISDNKKAIRLLREAGIVCEAQFIVGLDSETPETLEETYRMAMDWK 384

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D  +    T    T  +K
Sbjct: 385 PDLANWSMYTPWPFTPLFK 403


>gi|269127492|ref|YP_003300862.1| RNA modification enzyme, MiaB family [Thermomonospora curvata DSM
           43183]
 gi|268312450|gb|ACY98824.1| RNA modification enzyme, MiaB family [Thermomonospora curvata DSM
           43183]
          Length = 497

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 9/220 (4%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + + +  +  +    +V     C   C +C   S   R K  +   I         +
Sbjct: 140 LETFPSTLPTRRESPYAAWVAISVGCNNTCTFCIVPSLRGREKDRRPGEI--LAEIEALV 197

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
            +     ++             + Q  A +L    +   +          +P     +  
Sbjct: 198 AEGVLEVTLLGQNVNAYGSEFGDRQAFAKLLRACGQIEGLERVRF--TSPHPRDFTDDVI 255

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYA 178
               +    +  + + +QS  ++ LR + R++     +  I   R   P   ++ D+I  
Sbjct: 256 AAMAETPNVMPSLHMPLQSGSDRILRAMRRSYRQERFLGIIERVRAAMPEAAITTDIIVG 315

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +T   +E  L             +Q +   GT   +M
Sbjct: 316 FPGETDEDFEQTLHVVRQARFAGAFTFQYSKRPGTPAAEM 355


>gi|296109534|ref|YP_003616483.1| Radical SAM domain protein [Methanocaldococcus infernus ME]
 gi|295434348|gb|ADG13519.1| Radical SAM domain protein [Methanocaldococcus infernus ME]
          Length = 490

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 17/204 (8%)

Query: 28  CVKK----CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTP 81
           C +     C +C   S     K   E    + + E++ + +    R + S   F   G  
Sbjct: 200 CPQHINPGCGFCSVPSVFGYAKSRDE---DTIVEEIEELLKEGVKRIVLSAPDFLDYGRD 256

Query: 82  SL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNRISL 135
           S      +  + I  +L    +     ++  +      +  +    +  ++  G   I +
Sbjct: 257 SYNPYEPVNYEAIESLLSRCKELSERFNSKILIENVKANLFDERVAKIIKEYLGSTTIYI 316

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           G +S +++    LGR     + + A+ +A+    +     IY LP +        ++   
Sbjct: 317 GCESGDKEHCNLLGRPSEPRDVLKAVKIAKKYNLKAQVYFIYGLPGENERSSRNTIRFMH 376

Query: 196 SYAV--DHLSLYQLTIEKGTLFYK 217
                 D +++Y+      + F  
Sbjct: 377 KLKPYIDKITVYKFRPLPMSAFQN 400


>gi|15966991|ref|NP_387344.1| hypothetical protein SMc03855 [Sinorhizobium meliloti 1021]
 gi|307302459|ref|ZP_07582216.1| MiaB-like tRNA modifying enzyme [Sinorhizobium meliloti BL225C]
 gi|307316211|ref|ZP_07595655.1| MiaB-like tRNA modifying enzyme [Sinorhizobium meliloti AK83]
 gi|15076264|emb|CAC47817.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306898051|gb|EFN28793.1| MiaB-like tRNA modifying enzyme [Sinorhizobium meliloti AK83]
 gi|306903129|gb|EFN33719.1| MiaB-like tRNA modifying enzyme [Sinorhizobium meliloti BL225C]
          Length = 424

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 78/200 (39%), Gaps = 13/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTPSL 83
           C  +C +C            +   + + + + + + +          + +  +G   P  
Sbjct: 147 CDHRCTFC---IIPYGRGNSRSVPMGAVVDQARRLAESGYREIVLTGVDATSYGADLPGT 203

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                +A  +L  + +   +  +   +IEA+   ++           +  + L +Q  ++
Sbjct: 204 PTLGLLAKTLLKQVPEILRLRLSSIDSIEADGHLLD---LIAEEPRFMPHLHLSLQHGDD 260

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H++++A A     R + P +S   D+I   P +T   +E  ++ A    + 
Sbjct: 261 LILKRMKRRHSSADARAFCDEVRRLRPGISLGADMIAGFPTETEPMFENAMRLAEDCGIA 320

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
           HL ++  +   GT   +M +
Sbjct: 321 HLHVFPYSPRPGTPAARMPQ 340


>gi|307705271|ref|ZP_07642137.1| radical SAM superfamily protein [Streptococcus mitis SK597]
 gi|307621184|gb|EFO00255.1| radical SAM superfamily protein [Streptococcus mitis SK597]
          Length = 318

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|296117288|ref|ZP_06835879.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295976181|gb|EFG82968.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 10/228 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  +   +    +    E++  +Q               T  L   +
Sbjct: 207 CKSRCTFCLWPQTVGGHH-YRTRSPEHVAAEIRLAKQYFPQVKEFFFDDDTFTDDLPRAE 265

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  +  G+  + +G +S  +Q L  
Sbjct: 266 AIAKELGKLGVTWSCNAKA---------NVPRKTLEVLKANGLRLLLVGYESGNQQILHN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T    +  ++ A       L +   
Sbjct: 317 IKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIKFATEINPHTLQVSLA 376

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               GT  +K   +   +  S    +D   +  +      L   EI N
Sbjct: 377 APYPGTFLHKQATENGWLDASNAELIDENGVQIAPLHYPHLSHTEIFN 424


>gi|253687591|ref|YP_003016781.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251754169|gb|ACT12245.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 70/231 (30%), Gaps = 22/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G   +
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGE--T 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     I     +P     +    Y      V+ + L VQS
Sbjct: 211 Y--DGEICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIISVYEDTPELVSFLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I    N      +S D I   P +T   +E  ++     
Sbjct: 269 GSDRVLTMMKRRHTALEYKAIIRKLHNARPGILISSDFIVGFPGETQADFEQTMKLIADV 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             D    +  +   GT    M       +P E     LY L + IT     
Sbjct: 329 NFDMSYSFVYSARPGTPAADMVD----DVPEEEKKQRLYLLQERITQQAMR 375


>gi|20808294|ref|NP_623465.1| biotin synthase [Thermoanaerobacter tengcongensis MB4]
 gi|20516897|gb|AAM25069.1| Biotin synthase and related enzymes [Thermoanaerobacter
           tengcongensis MB4]
          Length = 353

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  I+     ++          + +I    G    
Sbjct: 68  YCHNTCFYCGLRGPNKAIKRYRMEPEEIIECAKRGVEM--------ELKTIVLQSG---- 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              ++    +  +         +++ +      +    +   +KAG +R  L +++   +
Sbjct: 116 ---EDRYYKITTLCNIVEKIKEMDVAVTLIIGELSKKEYAELKKAGADRYLLRIETTNRE 172

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 173 LYRKLHPGMSYENRLRCLMDLRELGYEVGTGSLIGLPGQTLEMLADDLLFFKKINADMLG 232

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   K
Sbjct: 233 IGPFIPCENTPLEK 246


>gi|331001788|ref|ZP_08325310.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae oral
           taxon 107 str. F0167]
 gi|330412762|gb|EGG92145.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae oral
           taxon 107 str. F0167]
          Length = 475

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +  ++ L        +  G    S    +
Sbjct: 190 CNNFCSYC-----IVPYVRGRERS-RKPEEIIDEIKTLVADGVKEIMLLGQNVNSYGRGL 243

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E + + A +L+ IA+   +       +  +P  +     +  +        + L +QS  
Sbjct: 244 EEEISFAGLLERIAEIEGLERLRF--MTPHPKDLSDEVIEVMKNNKKICKHLHLPLQSGS 301

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +   + +  +   +   P +S   D+I   P +T   +   L+       
Sbjct: 302 SAILKKMNRVYTKEDYLNLVKRIKTAIPDISLTTDIIVGFPGETEGDFLDTLEVVKEVRY 361

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D    +  +   GT   KM +  D 
Sbjct: 362 DSAFTFIYSKRSGTPAAKMEEQVDP 386


>gi|331091143|ref|ZP_08339985.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330405365|gb|EGG84901.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 485

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   ++    ++ + +L     +  +  G    S    L
Sbjct: 203 CNNFCSYC-----IVPYVRGRERS-RNPKDIVREIERLVADGVVEVMLLGQNVNSYGKNL 256

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  + K   +       + ++P  +  +  +  + +      + L VQS  
Sbjct: 257 ETPMTFAQLLQEVEKIDGLKRIRF--MTSHPKDLSDDLIEVMKNSKKICKHLHLPVQSGS 314

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   + +  +   +   P +S   D+I   P +T   +   +        
Sbjct: 315 SRILQKMNRRYTKEQYLELVRKIKTAIPDISLTTDIIVGFPGETEEDFLETMDVVKQVRY 374

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 375 DSAFTFIYSKRTGTPAATM 393


>gi|257466304|ref|ZP_05630615.1| MIAB protein [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917461|ref|ZP_07913701.1| tRNA-methylthiotransferase MiaB protein [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691336|gb|EFS28171.1| tRNA-methylthiotransferase MiaB protein [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 435

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVRDVDQYVKKGAKEIMLLGQNVNSYGHDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                 A +L  I K       +   +  +P     +  +   K       + L +QS  
Sbjct: 208 KNGDTFAKLLTEICKVEG--DFIVRFVSPHPRDFTDDVIEVIAKEDKIAKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS-----FDLIYALPKQTMTQWEMELQRALS 196
            Q L+ + R +   + +A   LA  I  ++S      D+I   P +T   +   L+    
Sbjct: 266 SQILKRMNRGYTKEQYLA---LAHKIQDKISGVALTTDIIVGFPGETEEDFLDTLEIVRE 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              D+  ++  +I +GT    M +     +  E +   +    +        + 
Sbjct: 323 INYDNAFMFMYSIRQGTRAATMQEQIPEDIKKERLQRLMDVQARCSYKESQKYQ 376


>gi|255263805|ref|ZP_05343147.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thalassiobium sp. R2A62]
 gi|255106140|gb|EET48814.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Thalassiobium sp. R2A62]
          Length = 436

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 17/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    Q    R +  I   G     +   
Sbjct: 159 CDKFCAFC-----VVPYTRGAE--LSRPADRIIREAQDLVERGVREITLLGQN---VNAY 208

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
           +     +   I     V     I     +P+ ++      +      +  + L VQS  +
Sbjct: 209 HGHEGGLAGLIWDLDKVDGLKRIRFTTSHPNDMDQALIDAHGTCDKLMPYLHLPVQSGSD 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R H   E  A I   R   P   +S D I   P +T   +E  +         
Sbjct: 269 RILKAMNRKHTREEYFALIERIRAARPDLLLSGDFIVGFPGETDQDFEDTMDLVRRVNFG 328

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
               ++ +   GT   +  +  D
Sbjct: 329 QAYSFKYSTRPGTPAAEKPQMDD 351


>gi|557263|emb|CAA57577.1| hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 446

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 67/230 (29%), Gaps = 16/230 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F                  + E+  + +  G R ++ +         +      
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAE-NGVREVTLLGQNVNGFRGLTHDGRL 215

Query: 91  LILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
                + +       +E      ++P        Q + +    V  I L VQS  ++ L 
Sbjct: 216 ADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLA 275

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + RNH   E  + I   +   P +    D I   P +T   +E  ++       D    
Sbjct: 276 AMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEDVGFDFSFS 335

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  +   GT            L  +          Q + S      YEIS
Sbjct: 336 FIYSARPGTPAA--------DLADDLPEEVKKQRLQILQSRIHQQGYEIS 377


>gi|121601837|ref|YP_988357.1| MiaB family tRNA modification protein [Bartonella bacilliformis
           KC583]
 gi|120614014|gb|ABM44615.1| tRNA modification enzyme, MiaB family [Bartonella bacilliformis
           KC583]
          Length = 427

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 15/215 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C  +C +C     +  Y  G    +    T ++ +++L        +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGPSRSVP-MGTIIEQIKRLIDNGIQEVVLTGVDLTSYGSNL 203

Query: 86  --PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
                +  ++  I  +      + ++   +    +          +  +  + L +Q+ +
Sbjct: 204 PGKATLGKLVSAILHHIPDLPRLHLS-SIDSIEADQELIDLLAYEERIMPHLHLSLQAGD 262

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H    AI       A+        DLI   P +T   ++  L       +
Sbjct: 263 NMILKRMKRRHLREHAIQFCQDLRAKRPSMVYGADLIAGFPTETEKMFQNSLNLINDCGL 322

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            HL ++  +  KGT   +M +     +      + 
Sbjct: 323 IHLHVFPFSPRKGTPAARMPQVNRETIKMRAEKLR 357


>gi|46579397|ref|YP_010205.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|81404892|sp|Q72DE5|MIAB_DESVH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|46448811|gb|AAS95464.1| tRNA-i(6)A37 modification enzyme MiaB [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 449

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 18/216 (8%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQW 61
            + + GQG+    V+V+    C   C YC    + R  +  +      +  ++ L     
Sbjct: 137 RDAVLGQGAVPASVFVNIMQGCDNFCAYC-IVPYTRGRQKSRATGTILDECRALLDRGAR 195

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L G    S      G  +       A +L  +A    +     +T   +P  +    
Sbjct: 196 EITLLGQNVNSFGQDSHGDGTTF-----AQLLHKVAALPGLERLRFVT--PHPKDIAPEV 248

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            + +        R+ L +Q+  ++ L+ +GR ++ +  +  +   R   P +  S D+I 
Sbjct: 249 VEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLRAARPDIVLSSDIIV 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             P +T   +   +    +        +  +   GT
Sbjct: 309 GFPGETEEDFMETMDALETVGYAASYSFCYSDRPGT 344


>gi|28210988|ref|NP_781932.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
           tetani E88]
 gi|75542486|sp|Q895H1|MIAB_CLOTE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|28203427|gb|AAO35869.1| miaB protein [Clostridium tetani E88]
          Length = 453

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 77/198 (38%), Gaps = 18/198 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E   +  +++++  +++L           G    S    
Sbjct: 172 CNNFCTYC-----IVPYVRGRERSRE--VSDIEKEIKELVKSGYKEITLLGQNVNSYGKD 224

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP+ + A +L  + +   +       + ++P  +  +     ++     N I L VQS 
Sbjct: 225 LEPKVSFAELLRHVNEIEGIERVRF--MTSHPKDLTEDVIYAIKECDKLCNHIHLPVQSG 282

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +N  + +  ++  +   P ++   D+I   P +T   +   L+      
Sbjct: 283 SSRILKKMNRYYNREDYLNLVNKIKEEIPNVAITTDIIVGFPGETEEDFNETLELVKEVE 342

Query: 199 VDHLSLYQLTIEKGTLFY 216
            D    +  +  KGT  Y
Sbjct: 343 YDSAFTFLYSKRKGTPAY 360


>gi|91974995|ref|YP_567654.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris BisB5]
 gi|91681451|gb|ABE37753.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris BisB5]
          Length = 443

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 73/202 (36%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYC--DF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C +C   F   NS         +  +++          LTG    S      GTP 
Sbjct: 154 CDHRCTFCIIPFGRGNSRSVPIGAVVDQ-VRALTERGHAEIVLTGVDLTSYGADLPGTPK 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           L     +  +L  + +   +  +   +IEA     + +        +  +  + L +Q+ 
Sbjct: 213 L--GALVKKVLRHVPELQRLRISSIDSIEA-----DRDLLDALAGEQRLMPHLHLSLQAG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H   +AIA     R + P +    DLI   P +T   +   L       
Sbjct: 266 DDLILKRMKRRHLRDDAIAFCEEVRRLRPDIALGADLIAGFPTETEAMFRRSLDLVDDCG 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           +  L ++  +   GT   +M +
Sbjct: 326 LTFLHVFPYSKRPGTPAARMPQ 347


>gi|325847803|ref|ZP_08170025.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480821|gb|EGC83874.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 432

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 65/202 (32%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    + R     ++      ++ +   ++L        +  G    S  +  
Sbjct: 152 CNMYCSYC-LIPYARGNIASRD-----LVSIIDEAKRLRDNGFKEIVLTGIHVASYGKDL 205

Query: 88  NIA-LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
           ++   ++D I     +     I +    P  ++    Q  +  K   +   L +QS  + 
Sbjct: 206 DLNISLIDVIEHISKIDGIERIRLSSMEPRHIDREFLQRMKDTKKACDHFHLSLQSGSDD 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++       + L R  FP      D+I   P ++    E             
Sbjct: 266 VLKLMNRKYDTKIFKEKVDLIREYFPNAGLTTDIIVGFPNESEKNHEQTKDFVRDIKFSK 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
             L++ +   GT    M    D
Sbjct: 326 THLFKYSKRDGTKAASMKDQVD 347


>gi|218708745|ref|YP_002416366.1| hypothetical protein VS_0724 [Vibrio splendidus LGP32]
 gi|218321764|emb|CAV17719.1| Hypothetical protein VS_0724 [Vibrio splendidus LGP32]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT-PSLIEP 86
           C K C YC       R +              Q   Q     ++          P+    
Sbjct: 157 CSKYCTYC--VVPYTRGEEVSRPMDDVLFEVAQLAEQGVREVNLLGQNVNAYRGPT--HE 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +I    + +    ++     I     +P     +  + Y+     V+ + L VQS  ++
Sbjct: 213 GDICSFAELLRLVASIDGIDRIRFTTSHPLEFGDDIIEVYKDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P ++   ++  ++       D 
Sbjct: 273 ILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGESKQDFQDTMKLIKEVDFDM 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              +  +   GT       D    +P++     LY L Q++ +    
Sbjct: 333 SFSFVFSPRPGTPAA----DYPCDVPAQEKKDRLYELQQTVNTQAMR 375


>gi|325524861|gb|EGD02810.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           sp. TJI49]
          Length = 457

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHDM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|291279198|ref|YP_003496033.1| hypothetical protein DEFDS_0799 [Deferribacter desulfuricans SSM1]
 gi|290753900|dbj|BAI80277.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 391

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 2/134 (1%)

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
           + +   +  I KN           E NP  V  +  +       N+ + +G+Q+  E+ L
Sbjct: 211 EELFKTIKSITKNNGRIFFGSFPSELNPFHVNEDLIKLMNHYCSNKKVVIGLQTASERLL 270

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD-HLSL 204
           + + R  +  +    I+L       +  D I+ LP +T    E  ++    +     +  
Sbjct: 271 KIINRPTDLIQVEKTINLFLKYGFGVDVDFIFGLPDETDKDIEQSIKWIEKWESKVRVHA 330

Query: 205 YQLTIEKGTLFYKM 218
           +      G+ F   
Sbjct: 331 HYFMPLPGSFFENK 344


>gi|239946801|ref|ZP_04698554.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont
           of Ixodes scapularis]
 gi|239921077|gb|EER21101.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont
           of Ixodes scapularis]
          Length = 464

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C K C +C   +       +  ++ + ++        +++    +++++    G    + 
Sbjct: 180 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKGPADKIF 239

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLGVQSL 140
              ++   L  I     +       I+ N   +                +  + L VQS 
Sbjct: 240 SLADLLKHLAQIPNLERLRYTTSHPIDMNDDLIKLHGTEPKL-------MPFLHLPVQSG 292

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R H+       I+  R   P +  S D I   P +T   +E  L       
Sbjct: 293 SNKILKSMNRKHDREYYFDIINRLREARPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVK 352

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT            + SE + +    L     + +
Sbjct: 353 YGQCYSFKYSPRPGTPGATRTDQIPEHIKSERLTILQKELMAQQLAFN 400


>gi|254167285|ref|ZP_04874137.1| radical SAM domain protein [Aciduliprofundum boonei T469]
 gi|197623548|gb|EDY36111.1| radical SAM domain protein [Aciduliprofundum boonei T469]
          Length = 459

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 88/247 (35%), Gaps = 12/247 (4%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           CP+ C F S   ++         S  + E++ +R+  G + I  +     T +L  P+ I
Sbjct: 199 CPFNCAFCSSSLQFGKRWRGHSDSRVIEELKILREEYGRKEIEFLD---DTFTLNRPRAI 255

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
             I   I K      ++  T  +          +  +  G + +  G++S  +++L F+G
Sbjct: 256 -RISKMIRKEGL---DISWTASSRVDIFTNEVAEALKYGGCHTVYFGIESGSQKTLDFIG 311

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           +     +++AA+  A+          I   P++T    +  ++ +    VD+      T 
Sbjct: 312 KRITPKQSLAAVKKAKAHKLHALGAFIIGFPEETKEDIKKTIKFSKKVGVDYAQFTVATP 371

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
             GT  +      +L+L         Y     +         EI+        S +    
Sbjct: 372 YPGTRLWNYAMARNLILTFN---WRKYTTLDPVMKLMHFTTQEITKFLQWAYVSFYVRPI 428

Query: 270 WRYGDYI 276
           +   D I
Sbjct: 429 YLLKDLI 435


>gi|27363745|ref|NP_759273.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           vulnificus CMCP6]
 gi|81449180|sp|Q8DFE8|MIAB_VIBVU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|27359861|gb|AAO08800.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Vibrio vulnificus CMCP6]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLYEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P +  S D I   P ++   ++  ++       
Sbjct: 271 DRILTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGESDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    L  E     LY L Q I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLSEETKKERLYELQQQINAQAMRYS 377


>gi|315425366|dbj|BAJ47032.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase [Candidatus
           Caldiarchaeum subterraneum]
 gi|315426546|dbj|BAJ48176.1| anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
           [Candidatus Caldiarchaeum subterraneum]
          Length = 459

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 77/205 (37%), Gaps = 14/205 (6%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F       +V +    +  + EM+ +R   G   I            +   N  
Sbjct: 208 CPFSCSFCWRPDYGRVYRVRRPERIVDEMEEIRYRFGYERIWFADE-------LFIANKK 260

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            ++    +  +   +V     A    ++ +  +  RKAG ++I  G+++ ++++L+ + +
Sbjct: 261 HVIKICEEIISRKLDVLWECLARADLIDDDVAKYMRKAGCHKIIFGLEAGDDRTLKLMNK 320

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL---YQL 207
                ++  A+        +     I   P +T       ++ A    +D+ S+   Y L
Sbjct: 321 QLTVKQSEKAVKTVVRHGIKAGGFFILGYPGETTETMLKTIKFASRLPLDYFSMTIPYPL 380

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVA 232
               GT  Y+  KD  +    E  A
Sbjct: 381 ---PGTKLYEQVKDRMISEEWEKPA 402


>gi|302537334|ref|ZP_07289676.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. C]
 gi|302446229|gb|EFL18045.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. C]
          Length = 506

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 70/224 (31%), Gaps = 13/224 (5%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFI--QSFLTE 58
           + L A+ + +  +  ++   +V     C   C +C     V   +  +E+          
Sbjct: 144 ESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFC----IVPALRGKEEDRRPGDILAEV 199

Query: 59  MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
              + +     ++           L + +  + +L    +   +          +P    
Sbjct: 200 EALVAEGVSEITLLGQNVNAYGSDLGDREAFSKLLRACGQIEGLERVRF--TSPHPKDFT 257

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFD 174
            +      +    + ++ + +QS  +  LR + R++     +  I    A      +S D
Sbjct: 258 DDVIAAMAETPNVMPQLHMPLQSGSDPILRAMRRSYRQERFLGIIEKVRAAIPHAAISTD 317

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +I   P +T   ++  +             +Q +   GT    M
Sbjct: 318 IIVGFPGETEEDFQQTMHVVREARFAGAFTFQYSKRPGTPAADM 361


>gi|90421738|ref|YP_530108.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris BisB18]
 gi|90103752|gb|ABD85789.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris BisB18]
          Length = 420

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 31/209 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---------- 77
           C  +C +C     +  +  G    +      ++ +R LT       +  G          
Sbjct: 151 CDHRCTFC-----IIPFGRGNSRSVP-LAAAVEQVRALTERGHAEIVLTGVDLTSYGADL 204

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRI 133
            G P+L        IL  + +   +  +   +IEA+   ++               +  +
Sbjct: 205 AGAPTL--GLLTKQILREVPELQRLRISSIDSIEADADLLDVVANEPRL-------MPHL 255

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMEL 191
            L +QS ++  L+ + R H  ++AI      R + P +    DLI   P +T   +   L
Sbjct: 256 HLSLQSGDDLILKRMKRRHCRAQAIEFCAQLRRLRPDIALGADLIAGFPTETDEMFARSL 315

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
               +  +  L ++  +   GT   KM +
Sbjct: 316 DLVEACDLSLLHVFPYSPRPGTAAAKMPQ 344


>gi|326775221|ref|ZP_08234486.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326655554|gb|EGE40400.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 629

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 83/247 (33%), Gaps = 11/247 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C             +         ++    L G   I ++        + +P 
Sbjct: 201 CPYKCSFC------YWGGAVGQRMRDFSRERLRAELDLFGYHRIPTVVLCDSNFGMRQPD 254

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSL 145
                 L    + +    ++E +   N S    N  +  +  G  +  ++ +Q+L++ +L
Sbjct: 255 AEFVEDLVRTREKYGFPRSLETSWAKNKSKTFHNIIRRMKSEGFQSSFTVALQTLDDTAL 314

Query: 146 RFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           R +GR N   +E                 +LI+  P +T+  +     +   +    +++
Sbjct: 315 RDMGRSNMRLNEWKELAAWLAAEGLDAYAELIWGAPGETVDSFLTGYDQLSEHVP-RIAV 373

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNHSFLGAES 263
           Y L +   T + +  ++   V    +     Y L     +       +     + +  E+
Sbjct: 374 YPLLLLPNTSYTENREEHGFVTVRGDSDDFEYVLANRTVTVAENTMMQRFMFWARMMGEN 433

Query: 264 LHNLNYW 270
           ++  + W
Sbjct: 434 MYFRHIW 440


>gi|227873763|ref|ZP_03991992.1| biotin synthase [Oribacterium sinus F0268]
 gi|227840379|gb|EEJ50780.1| biotin synthase [Oribacterium sinus F0268]
          Length = 359

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 11/192 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     ++R     E +  +    +   R+       + +  GG  P     
Sbjct: 66  YCKNGCHYCG----IQRENQEVERYRLTKEEILDCCREGHQLGFRTFVLQGGEDP-YFTD 120

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  I+  I + +      +  +  +       +++ Y +AG +R  L  ++ +E   +
Sbjct: 121 ERIVEIVKAIKEEFP-----DCAVTLSIGEKSKESYEKYFQAGADRYLLRHETADEAHYQ 175

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +    +  +   ++I  ++    +   P Q+      +L     +  D   + 
Sbjct: 176 KLHPKELSFQNRMRCLQDLKDIGFQVGCGFMVGSPGQSSKSLAKDLYFIQEFKPDMCGIG 235

Query: 206 QLTIEKGTLFYK 217
               +  T+F K
Sbjct: 236 PFIPQHSTIFAK 247


>gi|225076607|ref|ZP_03719806.1| hypothetical protein NEIFLAOT_01655 [Neisseria flavescens
           NRL30031/H210]
 gi|224952107|gb|EEG33316.1| hypothetical protein NEIFLAOT_01655 [Neisseria flavescens
           NRL30031/H210]
          Length = 440

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE----ME 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|186475181|ref|YP_001856651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           phymatum STM815]
 gi|229890465|sp|B2JD88|MIAB_BURP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|184191640|gb|ACC69605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phymatum
           STM815]
          Length = 456

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 63/202 (31%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGEEVSRPLDDVLTEIAGLADQ-GVREVTLLGQNVNAYRGAMT- 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +    IA     I     +     I     +P          Y K    V+ + L VQ 
Sbjct: 212 -LGATEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +Q     
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMQLVHDM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    + 
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLQ 352


>gi|218898872|ref|YP_002447283.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9842]
 gi|228902275|ref|ZP_04066435.1| hypothetical protein bthur0014_34530 [Bacillus thuringiensis IBL
           4222]
 gi|228909596|ref|ZP_04073419.1| hypothetical protein bthur0013_37480 [Bacillus thuringiensis IBL
           200]
 gi|228966715|ref|ZP_04127759.1| hypothetical protein bthur0004_35210 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|229890420|sp|B7ITM4|MIAB_BACC2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|218543596|gb|ACK95990.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9842]
 gi|228792814|gb|EEM40372.1| hypothetical protein bthur0004_35210 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228849885|gb|EEM94716.1| hypothetical protein bthur0013_37480 [Bacillus thuringiensis IBL
           200]
 gi|228857390|gb|EEN01890.1| hypothetical protein bthur0014_34530 [Bacillus thuringiensis IBL
           4222]
          Length = 509

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 221 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 276

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +E   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 277 VE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 333 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 392

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 393 DTAFTFIYSPREGTPAAKM 411


>gi|309379482|emb|CBX21848.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 442

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE----ME 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|253701179|ref|YP_003022368.1| MiaB-like tRNA modifying enzyme [Geobacter sp. M21]
 gi|251776029|gb|ACT18610.1| MiaB-like tRNA modifying enzyme [Geobacter sp. M21]
          Length = 429

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 10/211 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C  +C YC            +   +Q  L  M           + + I  G     L  P
Sbjct: 152 CDARCAYC---IVPFARGASRSVAVQEALDGMAAFAAQGFQEIVLTGIHLGAYGLDLAPP 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
            ++  ++        V      ++E  P+ V                 + L +QS  +  
Sbjct: 209 TDLLGLMRKAQDQGAVRRLRIGSVE--PTEVSRQLIDFMGTSTIACPHLHLPLQSGSDSV 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R ++ +     +H   +  P +    D+I   P ++  +++   +   S  + +L
Sbjct: 267 LSRMNRGYDTALFAEVVHSLVSAMPEVCIGSDVIAGFPGESDREFDETYRFIDSLPLAYL 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            ++  +   GT    M    +  +  E    
Sbjct: 327 HVFPFSQRPGTPAATMTPQVNPKVIKERAEA 357


>gi|163869369|ref|YP_001610625.1| hypothetical protein Btr_2683 [Bartonella tribocorum CIP 105476]
 gi|161019072|emb|CAK02630.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 427

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      ++ +R+LTG      +  G    S    +
Sbjct: 150 CDHRCTFC-----IIPYGRGPSRSVP-MGAVIEQIRKLTGEGIQEVVLTGVDLTSYGHDL 203

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
             +  +  +   I  +    + + ++   +    +          K  +  + L +Q+ +
Sbjct: 204 PGKATLGKLTSAILHHVPDLARLRLS-SIDSIEADEELINLLAYEKRIMPHLHLSLQAGD 262

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H    AI       A+        DLI   P +T   ++  L       +
Sbjct: 263 NMILKRMKRRHLREHAIQFCQELRAKRPTMVYGADLIAGFPTETEEMFQNSLALIKDCHL 322

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +  +GT   +M +
Sbjct: 323 THLHVFPFSPREGTPAARMPQ 343


>gi|154483536|ref|ZP_02025984.1| hypothetical protein EUBVEN_01240 [Eubacterium ventriosum ATCC
           27560]
 gi|149735446|gb|EDM51332.1| hypothetical protein EUBVEN_01240 [Eubacterium ventriosum ATCC
           27560]
          Length = 468

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 73/202 (36%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   ++    ++ + +L     +  +  G        +L
Sbjct: 186 CNNFCSYC-----IVPYVRGRERS-RNPEDIVKEVEELVSNGVVEVMLLGQNVNSYGKTL 239

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L+ + +   +       + ++P  +     +   K+     ++ L +QS  
Sbjct: 240 DNPISFAKLLEMVEQVEGLERIRF--MTSHPKDLSDELIEVMAKSKKICKQMHLPLQSGS 297

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +  +   R   P +    D+I   P +T   +E  L        
Sbjct: 298 SRLLKIMNRHYDKEQYLTLVDKLRAAIPDIGISTDIIVGFPGETDEDFEETLDVVRKARY 357

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           D    +  +   GT    M   
Sbjct: 358 DSAFTFIYSKRSGTPAATMPDQ 379


>gi|294793207|ref|ZP_06758353.1| radical SAM domain protein [Veillonella sp. 6_1_27]
 gi|294794763|ref|ZP_06759898.1| radical SAM domain protein [Veillonella sp. 3_1_44]
 gi|294454125|gb|EFG22499.1| radical SAM domain protein [Veillonella sp. 3_1_44]
 gi|294456152|gb|EFG24516.1| radical SAM domain protein [Veillonella sp. 6_1_27]
          Length = 372

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G     +  
Sbjct: 65  CIKNCNYCG----IRRENDKAERF-DMNREDIIKMAQWAYDHEYGSITLQSGE--RCDDA 117

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++D I     +  +  + I           ++  R+AG +R  L +++        
Sbjct: 118 FVDYVVDLIRDIKAI-GDGSLGITMCVGEQSEEAYRRMREAGASRYLLRIETTNTDLYHK 176

Query: 148 LGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 177 IHPRDELHSFETRVECLRRLRRVGFQVGTGVMIGLPGQTEDDLVNDILFYRDMDIDMIGM 236

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 237 GPYVVHHDTPLGQ 249


>gi|229013957|ref|ZP_04171082.1| hypothetical protein bmyco0001_43660 [Bacillus mycoides DSM 2048]
 gi|228747330|gb|EEL97208.1| hypothetical protein bmyco0001_43660 [Bacillus mycoides DSM 2048]
          Length = 319

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHSKWKDGKCIAYFQAYTNT---HAPLEVL 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +            K     + LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETTREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|167747072|ref|ZP_02419199.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662]
 gi|167654032|gb|EDR98161.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662]
          Length = 439

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 76/224 (33%), Gaps = 15/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC            +   ++  L+E++ + Q      + + I        L   
Sbjct: 157 CNQFCSYC---IIPYARGRVRSRDMEDVLSEIRGLAQNGCREFVITGIHVCSYGTDLDGD 213

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           + +  +L+ I K   V      ++E  P  +  +  +  +  +       L +QS  + +
Sbjct: 214 KGLIDLLEEIGKVGGVDRIRLGSLE--PGIITEDFVKRLQSIEQFCPHFHLSLQSGCDAT 271

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E      + R  +    ++ D+I   P +T  ++E   +          
Sbjct: 272 LKRMNRKYTTDEIREKAEILRKAYEDPALTTDIIVGFPGETEEEFEATRKFLEEIG---- 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            LY++ + K +              ++        +  ++   H
Sbjct: 328 -LYEMHVFKYSKRAGTRAAVMEDQVNDQEKARRSAVLIAMNEEH 370


>gi|160880133|ref|YP_001559101.1| radical SAM domain-containing protein [Clostridium phytofermentans
           ISDg]
 gi|160428799|gb|ABX42362.1| Radical SAM domain protein [Clostridium phytofermentans ISDg]
          Length = 462

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 73/194 (37%), Gaps = 18/194 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C +NS   R       +I   + + ++ +R L     +       G PS    
Sbjct: 170 CPYRCDFC-YNSSASRQ------YINRPVQDVIKDIRALNSHHIMFIDDNFIGNPSW--- 219

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                    + +   +       + AN   + ++     +++G   + +G +S+   SLR
Sbjct: 220 -----THSLLKELKPMHLKWNAAVSANILEM-LDLLDEMKESGCQSLFIGFESINPNSLR 273

Query: 147 FLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  NA       +    +    ++   ++ L   T   ++  L   +S+ ++ ++ +
Sbjct: 274 DVHKKQNAVNKYDNLVDAIHSRGIMINASFVFGLDSDTSEIFQSTLDWIVSHKIETVTSH 333

Query: 206 QLTIEKGTLFYKMH 219
            LT   GT  Y+  
Sbjct: 334 ILTPYPGTALYERM 347


>gi|70606747|ref|YP_255617.1| hypothetical protein Saci_0962 [Sulfolobus acidocaldarius DSM 639]
 gi|68567395|gb|AAY80324.1| universally conserved protein [Sulfolobus acidocaldarius DSM 639]
          Length = 421

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 20/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C   C +C      +  +    ++    +  ++ +R      ++  I   G   +   ++
Sbjct: 142 CAGDCNFC----ITKLARRKLRSYPPHLI--VESVRDAVRKGAVE-IELSGQDTAAYGLD 194

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN---FQGYRKAGV-NRISLGVQSL 140
              I  + D + K   V  +  I I    P     +     +  R+  V   I L VQS 
Sbjct: 195 LGQI-KLSDLVRKVTEVEGDFMIRIGMMTPEQAMRDIDGIIEVLRETKVYKFIHLPVQSG 253

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R +   E    +   R   P ++   D+I   P +    +   L+      
Sbjct: 254 DDNVLKLMNRKYTVDEYKDLVKEIRKKVPIVNITTDIIIGHPGEDENAFRNTLELMRDIK 313

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            + + L   +I   T    M +  D   P +   + + N      +      Y  S
Sbjct: 314 FERIHLAMYSIRPNTRSASMKQVPD---PVKKERIQIANKLYEELAYEIHSDYLNS 366


>gi|322390059|ref|ZP_08063594.1| TIGR01212 family radical SAM protein [Streptococcus parasanguinis
           ATCC 903]
 gi|321143186|gb|EFX38629.1| TIGR01212 family radical SAM protein [Streptococcus parasanguinis
           ATCC 903]
          Length = 319

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 45  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPDVEKYLVYFQNFTNT---HDKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        I LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETLAYLAELTERMHVTIELGLQTTYEATSELI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +D + L+
Sbjct: 162 NRAHSYDLYVETVKRIRKQVPKAEIVSHLINGLPGETHEMMVENVRRCVTDNEIDGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLMSQEEYVKVICDQLEIIPKHIVIH 266


>gi|291531601|emb|CBK97186.1| radical SAM protein, TIGR01212 family [Eubacterium siraeum 70/3]
          Length = 318

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 64/191 (33%), Gaps = 5/191 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---PRSISSIFFGGGTPSLIEPQN 88
           C YC   S     K   E +  S   ++   ++      P S+ + +F   T +      
Sbjct: 54  CIYCMGGSGYFTEKSDGEIY-DSVKRQLAAEKERIYKKHPDSLITAYFQANTNTYAPVAT 112

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +               ++    +  P  V               + LG+Q++ ++S + +
Sbjct: 113 LKEAYTAALDFGVHGISIGTRADCLPDDVIA-LLCDINSKTHLTVELGLQTIHDKSAQII 171

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +   E +      +    R    LI  LP+++++      +       D + ++ L 
Sbjct: 172 NRCYTYDEFLEGYRKLQESGIRTCLHLIDGLPEESLSDMLETAKEVARLHPDAVKIHLLH 231

Query: 209 IEKGTLFYKMH 219
           I  GT   ++ 
Sbjct: 232 INHGTALERLF 242


>gi|255004110|ref|ZP_05278911.1| 2-methylthioadenine synthetase (miaB) [Anaplasma marginale str.
           Virginia]
          Length = 463

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C     V  Y  G E + +S    +  +R+L    +   +
Sbjct: 142 SRGVSAFVSVQEGCDKFCTFC-----VVPYTRGPE-YSRSVEDVLAEVRKLADGGTKEVV 195

Query: 75  FFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             G    +          ++  ++  +A+   +      T  ++P  +  + +  ++   
Sbjct: 196 LLGQNVNAYHGTYKGNEWDLGRLIRKVAEVDGIERIRYTT--SHPKDMHSSLYDAHKHEP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
             +  + L VQS  +  LR + R H+  E +  I   +     +  S D I   P +T  
Sbjct: 254 KLLPCVHLPVQSGSDSVLRKMNRKHSVQEYMDIIDTLKEARSDIALSSDFIVGFPGETEE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +E  +             ++ +   GT 
Sbjct: 314 DFEATMDLVRHVGFATSYSFKYSPRPGTP 342


>gi|224372319|ref|YP_002606691.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Nautilia
           profundicola AmH]
 gi|223588403|gb|ACM92139.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Nautilia profundicola
           AmH]
          Length = 422

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 75/237 (31%), Gaps = 17/237 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSL 83
           C KKC +C     V + +  +    +   + +++ + +           ++   G   S+
Sbjct: 146 CDKKCSFC----IVPKTRGKELSIPMDLIIKQIEKLAKEGVKEITLLGQNVNNYGKRFSV 201

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+ +   +L  ++K   +          +P   +      +         I   +QS 
Sbjct: 202 EHPKVDFTDLLKEVSKIDGIERIRF--TSPHPLHADDRFLDEFANNPKICKHIHFPLQSG 259

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ + R +     +    + R I    ++ D+I   P ++   +E  +        
Sbjct: 260 SSEILKAMRRGYTKEWFLNRCEIIRQIPDVSITTDIIVGFPGESEEDFEHTMDVLEKVRF 319

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           + +  +  +    T   +M    D  +       +      +   I        Y++
Sbjct: 320 EQIFSFVYSPRPLTEAAEMPNQVDKNIAKERLYRLQSRHGEILDEIAKNQIGKIYKV 376


>gi|222475005|ref|YP_002563420.1| 2-methylthioadenine synthetase (miaB) [Anaplasma marginale str.
           Florida]
 gi|222419141|gb|ACM49164.1| 2-methylthioadenine synthetase (miaB) [Anaplasma marginale str.
           Florida]
          Length = 454

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C     V  Y  G E + +S    +  +R+L    +   +
Sbjct: 142 SRGVSAFVSVQEGCDKFCTFC-----VVPYTRGPE-YSRSVEDVLAEVRKLADGGTKEVV 195

Query: 75  FFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             G    +          ++  ++  +A+   +      T  ++P  +  + +  ++   
Sbjct: 196 LLGQNVNAYHGTYKGNEWDLGRLIRKVAEVDGIERIRYTT--SHPKDMHSSLYDAHKHEP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
             +  + L VQS  +  LR + R H+  E +  I   +     +  S D I   P +T  
Sbjct: 254 KLLPCVHLPVQSGSDSVLRKMNRKHSVQEYMDIIDTLKEARSDIALSSDFIVGFPGETEE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +E  +             ++ +   GT 
Sbjct: 314 DFEATMDLVRHVGFATSYSFKYSPRPGTP 342


>gi|154244369|ref|YP_001415327.1| MiaB-like tRNA modifying enzyme [Xanthobacter autotrophicus Py2]
 gi|154158454|gb|ABS65670.1| MiaB-like tRNA modifying enzyme [Xanthobacter autotrophicus Py2]
          Length = 437

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 19/228 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPS 82
           C  +C +C   F     R  V     +      +    +      +    +G    G P+
Sbjct: 166 CDHRCTFCIIPFGRGPSR-SVPMGAVVDQVRRLVANGHREVVLTGVDLTAYGADLPGAPT 224

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L G+     +  +    +EA     +    +   +    +  + L +Q+ 
Sbjct: 225 L--GRLVRSVLTGVPDLPRLRLSSIDAVEA-----DDELMRALAEEERLMPHLHLSLQAG 277

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H+ ++A+  I   R   P +    D+I   P +T  Q            
Sbjct: 278 DDLILKRMKRRHSRAQALDFISALRRARPDVVLGADIIAGFPTETEEQARATRAFLDEAG 337

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +  + ++  +   GT   +M +           A  L      +   H
Sbjct: 338 LAFVHVFPFSARPGTAAARMPQL--PAGVVAERARRLRETAADLLRRH 383


>gi|320538377|ref|ZP_08038252.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421]
 gi|320144762|gb|EFW36503.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421]
          Length = 454

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 74/260 (28%), Gaps = 43/260 (16%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C   C YC       R +  +   +   +TE+    Q       + +   G   S  +  
Sbjct: 180 CNSACAYC-------RIRFARGKSVSLPVTEVIRRAQAIEDEGFAELVLSGVNLSQYKSE 232

Query: 86  ----PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSL 140
                  +  +LD   K     S++       P S+     +      +     L +QS 
Sbjct: 233 GKNFADVLQQLLDETKKIHIRISSLY------PESITPTFLKVAENPRIAPHFHLSIQSG 286

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L  + R + A + ++ +   R+I     +  D+I   P +T   +E  L       
Sbjct: 287 SNAILNAMHRAYTADDIVSVVTALRSIKENPFLGCDIIAGFPGETAEDFEKTLSLCTDLR 346

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              +  +  +   GT    M       +  + VA+          +      Y       
Sbjct: 347 FTGIHAFPFSARPGTEAAGMKGQVPQRIAGKRVAML------QALAKEHYKDY------- 393

Query: 259 LGAESLHNLNYWRYGDYIGI 278
                   L YW       +
Sbjct: 394 --------LAYWDGKTLFAV 405


>gi|251790528|ref|YP_003005249.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dickeya zeae Ech1591]
 gi|247539149|gb|ACT07770.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dickeya zeae Ech1591]
          Length = 476

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 63/201 (31%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F                  L E+  +    G R +     ++    G    
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPADDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGAT-- 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               +I    + +     +     I  I ++P     +    Y      V+ + L VQS 
Sbjct: 213 -HDGDICSFAELLRLVAAIDGIDRIRFITSHPIEFTDDIISVYEDTPELVSFLHLPVQSG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  +Q      
Sbjct: 272 SDRILTMMKRRHTALEYKAIIRKLRKARPSIQISSDFIIGFPGETQEDFEQTMQLIADVD 331

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    M 
Sbjct: 332 FDISFSFIYSPRPGTPAADMV 352


>gi|229891223|sp|B2SW86|MIAB_XANOP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 484

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 64/196 (32%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSL 83
           C  YC F      R +     F    +   Q   Q  G R I+ +      + G      
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGAYGADA 247

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +P   A +   I     +     I     +P     +    YR      N + L VQ+ 
Sbjct: 248 GDPAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANCLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|188995206|ref|YP_001929458.1| putative SAM/TRAM family methylase protein [Porphyromonas
           gingivalis ATCC 33277]
 gi|229890595|sp|B2RKG6|MIAB_PORG3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|188594886|dbj|BAG33861.1| putative SAM/TRAM family methylase protein [Porphyromonas
           gingivalis ATCC 33277]
          Length = 465

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +   + +  +R L           G    S    +
Sbjct: 174 CNNFCSYC-----IVPYTRGRERS-REIESILNEVRDLKAKNFREVTLLGQNVNSY-RYE 226

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I+        V+  V          +P  ++        +     N I L  QS  
Sbjct: 227 QNGRIIRFPDLLAAVAEAVPDMRIRFTSPHPKDMDDEAIAVMARYRNICNHIHLPAQSGS 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R +     +  +   R   P   +S DL      +T   +E  L        
Sbjct: 287 DKMLRVMKRGYTRRWYLDRVAAIRRAIPDCAISSDLFCGFHSETEEDFEATLSLMEEVGY 346

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   +
Sbjct: 347 DSAFMFKYSERPGTYAAR 364


>gi|188576122|ref|YP_001913051.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188520574|gb|ACD58519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 460

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 64/196 (32%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSL 83
           C  YC F      R +     F    +   Q   Q  G R I+ +      + G      
Sbjct: 166 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGAYGADA 223

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +P   A +   I     +     I     +P     +    YR      N + L VQ+ 
Sbjct: 224 GDPAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANCLHLPVQAG 283

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 284 SDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 343

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 344 FDQSFSFVYSRRPGTP 359


>gi|260574923|ref|ZP_05842925.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sp. SW2]
 gi|259022928|gb|EEW26222.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodobacter sp. SW2]
          Length = 585

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 10/205 (4%)

Query: 17  NSLGVYVHWP----FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
             LGV V  P     C   C +C       ++K  ++  ++     +  + +L     + 
Sbjct: 189 TPLGVRVAIPNMARGCPFTCSFCS------QWKFWRDYRVRDPKKVVDEIERLVNDHGVG 242

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR 132
                   P++   + I    + I +         I         +      YR+AG+  
Sbjct: 243 FFILADEEPTINRKKFIEFCQELIDRGLPDKVKWGINTRVTDIYRDRELLTFYRRAGLVH 302

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           ISLG ++  +  L    +    +E   AI L R          I  L  +T    E   Q
Sbjct: 303 ISLGTEAAAQLKLDLFNKETTVAENKEAIRLLREADIFTEAQFIVGLDNETKETLEETFQ 362

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
               +  D  +    T    T  ++
Sbjct: 363 MVWDWQPDLANWAMYTPWPFTPLFQ 387


>gi|260752486|ref|YP_003225379.1| MiaB-like tRNA modifying enzyme [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258551849|gb|ACV74795.1| MiaB-like tRNA modifying enzyme [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 419

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     + + +    +   SF   +   R+L        +  G    S    L
Sbjct: 145 CNHHCSFC----IIPQGRGRNRS--ASFDDILDCARKLINNGHQELVLTGVDLTSYGQDL 198

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P N+  ++         +         +P  ++        +    +  I L +Q+ +
Sbjct: 199 TSPSNLGELV-AFLLKKLKNLKRLRLSSLDPDGIDPLLMALITEDERIMPHIHLSLQAGD 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H+  +AI  +   +   P ++   D+I   P +        L+      +
Sbjct: 258 NTILKRMRRRHSREQAIELVASLKKRRPEIAIGADIIAGFPTEDEEMAANSLRMIDECDI 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
               ++  +  +GT   KM +  
Sbjct: 318 VFGHIFPYSPRQGTPAAKMPQVH 340


>gi|237733845|ref|ZP_04564326.1| tRNA 2-methylthioadenine synthetase [Mollicutes bacterium D7]
 gi|229383183|gb|EEO33274.1| tRNA 2-methylthioadenine synthetase [Coprobacillus sp. D7]
          Length = 415

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E        ++         + +  +   G     +  Q
Sbjct: 133 CNKFCTYC-----IVPYTRGKER--SRLAKDI--------IKEVEELVAEGYQEITLLGQ 177

Query: 88  NIALILDGIAKNWTVSSNVEITIEAN----------PSSVEVNNFQGYRKAG--VNRISL 135
           N+      + +++  S+ +E   + N          P     +  +   K    +  I L
Sbjct: 178 NVNSYGKDLGEDYNFSNLLEDVAKTNIPRIRFTTSHPWDFSEDMIKIIAKYDNIMPAIHL 237

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS   + L+ +GR ++  + +   H  +   P   ++ D+I   P +T  Q+   L  
Sbjct: 238 PVQSGNNEVLKLMGRRYSREQYLELFHKIKEYIPDCTVTTDIIVGFPNETHEQYLDTLSL 297

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                 D    +  +   GT   KM  +
Sbjct: 298 YQECEYDLAYTFVYSPRAGTPAAKMVDN 325


>gi|241761947|ref|ZP_04760032.1| MiaB-like tRNA modifying enzyme [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241373627|gb|EER63199.1| MiaB-like tRNA modifying enzyme [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 419

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     + + +    +   SF   +   R+L        +  G    S    L
Sbjct: 145 CNHHCSFC----IIPQGRGRNRS--ASFDDILDCARKLINNGHQELVLTGVDLTSYGQDL 198

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P N+  ++         +         +P  ++        +    +  I L +Q+ +
Sbjct: 199 TSPSNLGELV-AFLLKKLKNLKRLRLSSLDPDGIDPLLMALITEDERIMPHIHLSLQAGD 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H+  +AI  +   +   P ++   D+I   P +        L+      +
Sbjct: 258 NTILKRMRRRHSREQAIELVASLKKRRPEIAIGADIIAGFPTEDEEMAANSLRMIDECDI 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
               ++  +  +GT   KM +  
Sbjct: 318 VFGHIFPYSPRQGTPAAKMPQVH 340


>gi|229891216|sp|B1JG95|MIAB_YERPY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGA-TY-- 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +    YR     V+ + L VQS  +
Sbjct: 212 DGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D
Sbjct: 272 RILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               +  +   GT    +  +       + + +    ++Q    
Sbjct: 332 TSYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 375


>gi|229199767|ref|ZP_04326386.1| hypothetical protein bcere0001_52290 [Bacillus cereus m1293]
 gi|228583707|gb|EEK41906.1| hypothetical protein bcere0001_52290 [Bacillus cereus m1293]
          Length = 327

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 62  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHSKWKDGKCIAYFQAYTNT---HAPLEVL 118

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +  +         K     + LG+Q++ E++   + 
Sbjct: 119 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLIN 178

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 179 RAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 238

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 239 LKGTPMVKQYEKGQL 253


>gi|254467232|ref|ZP_05080643.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           Y4I]
 gi|206688140|gb|EDZ48622.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           Y4I]
          Length = 440

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E Q + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREAQDLVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  -LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
             +    +   LD I     +         ++P+ ++ +  + +      +  + L VQ+
Sbjct: 215 GDLTLAQLIWELDKIDGLERIR-----FTTSHPNDMQDDLIEAHGTCAKLMPYLHLPVQA 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   I  I   R   P   +S D I   P++T   ++  +      
Sbjct: 270 GSDKILKRMNRSHTAESYIRLIERIRAARPDILISGDFIVGFPEETEEDFQATMDLVEEV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT   + 
Sbjct: 330 KYGTAYSFKYSTRPGTPAAER 350


>gi|78188899|ref|YP_379237.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
 gi|78171098|gb|ABB28194.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
          Length = 465

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 78/255 (30%), Gaps = 20/255 (7%)

Query: 10  NMTGQGSNSLGVYVHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
            +  + S      +       C   C +C   +     K  +   +   L EM++ +   
Sbjct: 182 ALASKASKKYSALIPILATKGCPVGCNFC--TTPTIYGKSFRYRELDLVLDEMRYHQNRL 239

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
           G + ++  F          PQ    +L+ +AK       V      + + ++        
Sbjct: 240 GKQKVNFSFMDDNI--SFRPQYFMTLLEEMAKL-----GVHWNANISMNFLDKPEVAELA 292

Query: 127 -KAGVNRISLGVQSLEEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTM 184
            ++G + +S+G +SL  ++L+ + +  N        +         +    ++     T 
Sbjct: 293 GRSGCDLLSIGFESLNPETLKTVHKGSNRLGNYETVVSNLHKNGIAIQGYFMFGFDNDTE 352

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------ 238
             +++     +   ++      +T   GT ++   K        +      Y        
Sbjct: 353 ESFQLTYDFIMKNRIEFPVFSLVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPQKMS 412

Query: 239 TQSITSAHGLHAYEI 253
            + +         EI
Sbjct: 413 GEKLLENFVKLQKEI 427


>gi|56551967|ref|YP_162806.1| MiaB-like tRNA modifying enzyme [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56543541|gb|AAV89695.1| MiaB-like tRNA modifying enzyme [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 419

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     + + +    +   SF   +   R+L        +  G    S    L
Sbjct: 145 CNHHCSFC----IIPQGRGRNRS--ASFDDILDCARKLINNGHQELVLTGVDLTSYGQDL 198

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P N+  ++         +         +P  ++        +    +  I L +Q+ +
Sbjct: 199 TSPSNLGELV-AFLLKKLKNLKRLRLSSLDPDGIDPLLMALITEDERIMPHIHLSLQAGD 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H+  +AI  +   +   P ++   D+I   P +        L+      +
Sbjct: 258 NTILKRMRRRHSREQAIELVASLKKRRPEIAIGADIIAGFPTEDEEMAANSLRMIDECDI 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
               ++  +  +GT   KM +  
Sbjct: 318 VFGHIFPYSPRQGTPAAKMPQVH 340


>gi|78357421|ref|YP_388870.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|123741239|sp|Q30YS1|MIAB_DESDG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78219826|gb|ABB39175.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 464

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 18/185 (9%)

Query: 18  SLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
            +  YV+    C   C YC     V   +  Q++  +S    +   R L G  +      
Sbjct: 147 PVSAYVNIMQGCNNFCAYC----IVPYTRGRQKS--RSSAAVLDECRTLVGNGAREITLL 200

Query: 77  GGGTPSL-IEPQN----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAG 129
           G    S  ++P       A +L  +A    +       +  +P  +     + +   K  
Sbjct: 201 GQNVNSYGLDPHGDGTTFARLLHDVAAIPGLERLRF--MTPHPKDIAGEVIEAFGALKNL 258

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
             R+ L +QS  ++ L+ +GR ++ +  +  +   + + P +    DLI   P +T   +
Sbjct: 259 CPRVHLPLQSGSDRVLKAMGRKYDMARYMDIVTRLKAVRPDIQITSDLIVGFPGETEADF 318

Query: 188 EMELQ 192
           E  L+
Sbjct: 319 EQTLE 323


>gi|303233705|ref|ZP_07320359.1| MiaB-like protein [Finegoldia magna BVS033A4]
 gi|302495139|gb|EFL54891.1| MiaB-like protein [Finegoldia magna BVS033A4]
          Length = 430

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 71/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-GTPSL--- 83
           C + C YC     +   +    +     + ++    +         I   G    S    
Sbjct: 152 CSQFCSYC----IIPYARGPIRS---RNIRDIVLEAKRLADNGFKEIVLTGIHVASYGKD 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
            + ++I  ++D I     +     I + +  P  V+          +   +   L +QS 
Sbjct: 205 FDNKDIG-LIDVIEDIANIDKIKRIRLSSLEPRIVDKKFLDRLSQVEQFCDHFHLSLQSG 263

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R ++       I+L R  +P   ++ D+I   P +T   +E  L       
Sbjct: 264 SDSILQSMNRKYDTHLYERTINLIREYYPNAAITTDIIVGFPGETDEDFEQTLNFVDKIK 323

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + +++ +  KGT+  KM
Sbjct: 324 FSKIHVFKYSNRKGTVASKM 343


>gi|300705107|ref|YP_003746710.1| isopentenyl-adenosine a37 tRNA methylthiolase, Fe-S protein
           [Ralstonia solanacearum CFBP2957]
 gi|299072771|emb|CBJ44126.1| isopentenyl-adenosine A37 tRNA methylthiolase, Fe-S protein
           [Ralstonia solanacearum CFBP2957]
          Length = 460

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F            Q         +++++     G  S
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYVGKMGNTS 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P        + Y   +  V+ + L VQ  
Sbjct: 214 --ERADFALLLEYVAEIPGIERIRYTT--SHPKEFTSRLIEAYATNRKLVDHLHLPVQHG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I   R I P +S   D+I   P +T   +   +       
Sbjct: 270 SDRILMAMKRGYTVLEYKSIIRKLRTIRPDISIATDIIVGFPGETDADFAKTMDLVHEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 330 YDNSFSFIYSPRPGTPAANLH 350


>gi|300715843|ref|YP_003740646.1| tRNA-thiotransferase [Erwinia billingiae Eb661]
 gi|299061679|emb|CAX58795.1| tRNA-thiotransferase [Erwinia billingiae Eb661]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 80/253 (31%), Gaps = 20/253 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K   YC F                  L E+  +
Sbjct: 133 IEKFDRLPEPRADGP-SAFVSIMEGCNK---YCTFCVVPYTRGEEVSRPSDDILFEIAQL 188

Query: 63  RQLTGPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSS 116
               G R ++ +      + G T       +I    D +     +     I     +P  
Sbjct: 189 ASQ-GVREVNLLGQNVNAYRGETF----DGDICSFADLLRLVAAIDGIDRIRFTTSHPIE 243

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMS 172
              +    YR     V+ + L VQS  ++ L  + R+H A E  + I   LA     +MS
Sbjct: 244 FTDDIIDVYRDTPELVSFLHLPVQSGSDRILTLMKRSHTALEYKSTIRKLLAARPAMQMS 303

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D I   P +T   +E  ++       D    +  +   GT    +  D       E + 
Sbjct: 304 SDFIIGFPGETQQDFEQTMKLIGEINFDTSFSFIYSARPGTPAADLPDDVSDEEKKERLW 363

Query: 233 VDLYNLTQSITSA 245
           +    + Q + + 
Sbjct: 364 LLQQRINQQVMNW 376


>gi|296532248|ref|ZP_06894992.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseomonas cervicalis
           ATCC 49957]
 gi|296267418|gb|EFH13299.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseomonas cervicalis
           ATCC 49957]
          Length = 451

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     V  Y  G    +      ++  R L   R  + +   G   +   P 
Sbjct: 172 CDHRCTFC-----VIPYGRGPSRSVP-MGAVVEQARALVA-RGYNELVLTGVDITSYGPD 224

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                  G      ++   E+        +P  ++ + ++        +  + L +Q  +
Sbjct: 225 LPGRPTLGQLARRLLALLPELQRLRLSSLDPVEIDEDLWRLIAGEPRLMPHLHLSLQHGD 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H+ ++A+A    AR++ P +    DLI   P +T   +   L+      +
Sbjct: 285 DVMLKRMKRRHSRADALACARRARDLRPGIAFGADLIAGFPTETEAHFTRMLELVEEAGL 344

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   +M +
Sbjct: 345 HFLHVFPYSERPGTPAARMPQ 365


>gi|258645507|ref|ZP_05732976.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
           15470]
 gi|260402861|gb|EEW96408.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
           15470]
          Length = 478

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTG------PRSISSIFFGGG 79
           C K C YC     +  Y  G+E    I     E++ + +          ++++S      
Sbjct: 195 CNKFCTYC-----IVPYVRGRETSRTIDDICREIEKLAREGYKEITLLGQNVNSYGLDFH 249

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             +     +   ++  I K   +       + ++P  +          +   V  + L V
Sbjct: 250 DGT-----DFGSLIHAIDKIDGIKRVRY--MTSHPKDMTFGMVDAMAASPKVVRHMHLPV 302

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q    + LR + R +        +   R   P ++   DLI   P +T    E  L    
Sbjct: 303 QHGANEILRRMNRGYTIERFKELLKYVREKMPGITVTTDLITGFPGETEDMHEETLTLLK 362

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               D    +  +  +GT   +M
Sbjct: 363 EMKFDSAYTFIYSPRRGTPAARM 385


>gi|240144956|ref|ZP_04743557.1| radical SAM protein, family [Roseburia intestinalis L1-82]
 gi|257202998|gb|EEV01283.1| radical SAM protein,  family [Roseburia intestinalis L1-82]
          Length = 254

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 6/179 (3%)

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +    + +  I     +   V   V ++I      +  +      +    +  
Sbjct: 37  YFQAYTNTYAPVEYLRRIFTEAIEEPDV---VALSIATRCDCLPPDVLDLLDELNRRKPV 93

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I LG+Q++ +++L  +      S+   A+         +   LI  LP +T       +
Sbjct: 94  WIELGLQTIHDKTLHAIRSGFTLSQFEQAVSDLHKRNIPVITHLILGLPGETKEDMLSSV 153

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +   S  V  + L  L I KGT     +      L +     DL     ++     +  
Sbjct: 154 RYVGSLPVTGIKLQLLHILKGTDLGTAYMADPFPLFTLEEYCDLIADCIALLPPEIVIH 212


>gi|228470161|ref|ZP_04055070.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228308299|gb|EEK17154.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 443

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 24/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--------QENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C YC       R+            E  + +   E Q + Q +    +        
Sbjct: 152 CDRTCSYCAIPLITGRHHSRPMEEIVREVEGRVSAGCREFQIIAQDSTYYGVDLYQEQAI 211

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P          +LD +A+   V         A P+   +       +       + L +
Sbjct: 212 AP----------LLDRLAQVNGVHWLRLHY--AYPNHFPLALLDVMAQHDNICKYLDLAL 259

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRAL 195
           Q      L+ + R     E +A +   R   P ++    ++   P +T   +   L    
Sbjct: 260 QHSSNHMLQLMRRQITREETVALLERIREQVPGIALRTTMMVGHPGETDEDFADLLDFVS 319

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
               + L  +Q + E+GT  YK ++
Sbjct: 320 QMRFERLGAFQYSHEEGTYAYKHYQ 344


>gi|167837301|ref|ZP_02464184.1| radical SAM domain protein [Burkholderia thailandensis MSMB43]
          Length = 481

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++  +   ++S L E++W+R       +  
Sbjct: 200 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHR-YRTRSVESVLAEVKWIRDNMP--EVKE 256

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 257 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 307

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       R +  ++    I  LP +T    +  +
Sbjct: 308 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCRKLGIKIHGTFILGLPGETKETIKKTI 367

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y  
Sbjct: 368 EYAKEINPHTIQVSLAAPYPGTRLYNQ 394


>gi|95930239|ref|ZP_01312977.1| MiaB-like tRNA modifying enzyme [Desulfuromonas acetoxidans DSM
           684]
 gi|95133702|gb|EAT15363.1| MiaB-like tRNA modifying enzyme [Desulfuromonas acetoxidans DSM
           684]
          Length = 428

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+   + +    +  + QL        +  G    +    +
Sbjct: 149 CNAFCSYC-----IIPYARGRSRSVNT-SAVVDQVNQLVAGGYREVVLTGIHIGNYGQDL 202

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            PQ    + D +    T +    I +    P  V        + +        + +QS  
Sbjct: 203 TPQ--CTLTDLLNALLTQTDGCRIRLGSIEPQEVNEALIDCVQHSSRICPHFHIPLQSGC 260

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R+++  +    + L     PR+S   D+I   P +T  Q     +   S  V
Sbjct: 261 DDVLQQMNRHYSIRQFHDTVELLCQKIPRVSIGIDVISGFPGETEAQHRHTCEFISSLPV 320

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
            +L ++  +   GT    M   
Sbjct: 321 HYLHVFPFSARPGTPAATMPDQ 342


>gi|327189430|gb|EGE56594.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli CNPAF512]
          Length = 509

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L   + +  I      P+     
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRSPELFA------REIARLYREQGVELINLADENPTSSRRA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   IA+N  V    +I        +  + +    YRKAGV R  LG+++ +E +L
Sbjct: 257 WLAFLEAMIAENVPV----QIVGSTRADDIVRDADILHLYRKAGVVRWLLGMENTDEATL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++ ++      ++ LSY  D +   
Sbjct: 313 ALIKKGGAKTTDREAIRLLRQHDILSMATWVVGFEEEKLSDLWRGFRQLLSYDPDQIQAL 372

Query: 206 QLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +T  + T F+     +   + D+        V              +   E++  +   
Sbjct: 373 YVTPHRWTPFFRIARDRQVIETDIRKWDYKHQVLKMRYLHPFVLVACVKLIEVAVQARPK 432

Query: 261 A 261
           A
Sbjct: 433 A 433


>gi|182434706|ref|YP_001822425.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463222|dbj|BAG17742.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 617

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 83/247 (33%), Gaps = 11/247 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C             +         ++    L G   I ++        + +P 
Sbjct: 189 CPYKCSFC------YWGGAVGQRMRDFSRERLRAELDLFGYHRIPTVVLCDSNFGMRQPD 242

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSL 145
                 L    + +    ++E +   N S    N  +  +  G  +  ++ +Q+L++ +L
Sbjct: 243 AEFVEDLVRTREKYGFPRSLETSWAKNKSKTFHNIIRRMKSEGFQSSFTVALQTLDDTAL 302

Query: 146 RFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           R +GR N   +E                 +LI+  P +T+  +     +   +    +++
Sbjct: 303 RDMGRSNMRLNEWKELAAWLAAEGLDAYAELIWGAPGETVDSFLTGYDQLSEHVP-RIAV 361

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE-ISNHSFLGAES 263
           Y L +   T + +  ++   V    +     Y L     +       +     + +  E+
Sbjct: 362 YPLLLLPNTSYTENREEHGFVTVRGDSDDFEYVLANRTVTVAENTMMQRFMFWARMMGEN 421

Query: 264 LHNLNYW 270
           ++  + W
Sbjct: 422 MYFRHIW 428


>gi|51595460|ref|YP_069651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|153950190|ref|YP_001401877.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|81640093|sp|Q66DD3|MIAB_YERPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891036|sp|A7FKU9|MIAB_YERP3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891221|sp|B2K896|MIAB_YERPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|51588742|emb|CAH20353.1| putative tRNA-thiotransferase [Yersinia pseudotuberculosis IP
           32953]
 gi|152961685|gb|ABS49146.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia
           pseudotuberculosis IP 31758]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGA-TY-- 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +    YR     V+ + L VQS  +
Sbjct: 212 DGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D
Sbjct: 272 RILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               +  +   GT    +  +       + + +    ++Q    
Sbjct: 332 TSYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 375


>gi|299067908|emb|CBJ39122.1| isopentenyl-adenosine A37 tRNA methylthiolase, Fe-S protein
           [Ralstonia solanacearum CMR15]
          Length = 452

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F            Q         +++++     G  S
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYIGKMGDTS 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P        + Y   +  V+ + L VQ  
Sbjct: 214 --ERADFALLLEYVAEIPGIERIRYTT--SHPKEFTARLIEAYATNRKLVDHLHLPVQHG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R +   E  + I   R I P +S   D I   P +T   +   +       
Sbjct: 270 SDRILMAMKRGYTVLEYKSIIRKLRAIRPDLSVATDFIVGFPGETDADFAKTMDLVHEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 330 YDNSFSFIYSPRPGTPAANLH 350


>gi|269797216|ref|YP_003311116.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269093845|gb|ACZ23836.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 372

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G     +  
Sbjct: 65  CIKNCNYCG----IRRENDKTERF-DMNREDIIKMAQWAYDHEYGSITLQSGE--RCDDA 117

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++D I     +  +  + I           ++  R+AG +R  L +++        
Sbjct: 118 FVDYVVDLIRDIKAI-GDGSLGITMCVGEQSEEAYRRMREAGASRYLLRIETTNTDLYHK 176

Query: 148 LGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 177 IHPRDELHSFETRVECLRRLRRVGFQVGTGVMIGLPGQTEEDLVNDILFYRDMDIDMIGM 236

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 237 GPYVVHHDTPLGQ 249


>gi|228961018|ref|ZP_04122646.1| hypothetical protein bthur0005_44700 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228798651|gb|EEM45636.1| hypothetical protein bthur0005_44700 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 319

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLVEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    ++   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|169350629|ref|ZP_02867567.1| hypothetical protein CLOSPI_01401 [Clostridium spiroforme DSM 1552]
 gi|169292683|gb|EDS74816.1| hypothetical protein CLOSPI_01401 [Clostridium spiroforme DSM 1552]
          Length = 481

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 72/208 (34%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E        ++         + + S+   G     +  Q
Sbjct: 199 CNKFCTYC-----IVPYTRGKER--SRLAKDI--------VKEVESLVADGYQEITLLGQ 243

Query: 88  NIALILDGIAKNWTVSSNVEIT----------IEANPSSVEVNNFQGYRKAG--VNRISL 135
           N+      +  ++  S+ +E              ++P     +  +   K    +  I L
Sbjct: 244 NVNSYGKDLGNDYNFSNLLEDVAKTGIPRIRFTTSHPWDFSEDMIKIIAKYDNIMPAIHL 303

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS   + L+ +GR +   + +   +  +   P   ++ D+I   P +T  Q+   L  
Sbjct: 304 PVQSGNNEVLKLMGRRYTREQYLELFYKIKKYIPDCTITTDIIVGFPNETHEQYLDTLSL 363

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                 D    +  +  +GT   KM  +
Sbjct: 364 YQECEYDLAYTFVYSPREGTPAAKMVDN 391


>gi|153869266|ref|ZP_01998915.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Beggiatoa sp. PS]
 gi|152074191|gb|EDN71072.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Beggiatoa sp. PS]
          Length = 470

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 69/209 (33%), Gaps = 8/209 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C FN+ + R         +  + E++ + +  G      I    G    I+  
Sbjct: 214 CPFDCNFCAFNTLMGRGFRYHSP--KRVVDEIERLHKQFGVNYFEFIDDNIG----IKKA 267

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL-R 146
            +  I + I K   +          + ++++ +       AG     L V+   +    +
Sbjct: 268 RLIEICNEILKR-NLDIQFTSMSGLHIATLDQDIIDALCDAGYLHAILPVEHASDFIRNK 326

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +G+  +  +      L +          I   P++T       ++      +D ++++ 
Sbjct: 327 VIGKKLSRDKIFEVADLFKKRGVMTRGFFIIGFPEETDKTIRETIKMIKELDLDLVNVFN 386

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           L    GT  ++   +  L L   +     
Sbjct: 387 LIPFPGTRLFQQCLEHKLFLNKVDTNTLW 415


>gi|257469865|ref|ZP_05633957.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064094|ref|ZP_07928579.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689770|gb|EFS26605.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 538

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 82/258 (31%), Gaps = 33/258 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF       ++     I+  L  ++   +    + I+ 
Sbjct: 33  CPNRDGTLSTKGCIFCSESGSGDF---AGSRRLSITEQIEEQLKLIEN--KFPSGKVIA- 86

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---V 130
            +F   T +  + + +  I      +  V   + + I   P  +  N  +   +      
Sbjct: 87  -YFQNFTNTYGDVEYLRKIYYEALSHPRV---IGLAIATRPDCLGDNIIELLNEINNKYF 142

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I LG+Q++ E+  + + R +       A    +    +    +I  LP +        
Sbjct: 143 LWIELGLQTINEKVAKIINRQYPLKTYEEAAEKLKKYNIKFVTHIIVGLPGEEEDDPLNT 202

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +       + ++ L I K T   K +K+ +L +  +          + +       +
Sbjct: 203 AVYSEKCGTWGIKIHLLHIIKNTELEKFYKENELKIQKKE------EYVKKVVKILQNIS 256

Query: 251 YEISNHSFLGAESLHNLN 268
           Y I  H   G  +   L 
Sbjct: 257 YNIVIHRLTGDGNKETLA 274


>gi|253582315|ref|ZP_04859538.1| radical SAM domain-containing protein [Fusobacterium varium ATCC
           27725]
 gi|251835854|gb|EES64392.1| radical SAM domain-containing protein [Fusobacterium varium ATCC
           27725]
          Length = 554

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 30/235 (12%)

Query: 28  CVKKCPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC         + S + R K   + F+ S +  ++++ +    +    +     
Sbjct: 183 CPFNCSYCMSSIDKTVRYYS-IERVKEDLKIFLDSSIRLLKFVDRTFNLKKERYMEI--- 238

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGV 137
                       +L+   +  T         E N +  +            G  +  +GV
Sbjct: 239 ---------WKFLLENYREGITF------HFEINANIFDDETLDFLETVPKGYFQFEIGV 283

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           QS+   +++ + RN+   +    +         +  DLI  LP +T   ++   +     
Sbjct: 284 QSINSDTMKSINRNNVLDKLAHNVRRINKNI-HLHLDLIAGLPYETYEIFKKSFEYVHDL 342

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             + + L  L + KGT  Y   +       S+       N   S      L  +E
Sbjct: 343 KPEMIQLGFLKLLKGTQMYNEIEKYQYKYFSKPPYEVFSNNFISFAEIIKLKNFE 397


>gi|238752614|ref|ZP_04614087.1| hypothetical protein yrohd0001_990 [Yersinia rohdei ATCC 43380]
 gi|238709205|gb|EEQ01450.1| hypothetical protein yrohd0001_990 [Yersinia rohdei ATCC 43380]
          Length = 478

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 161 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 218

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 219 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 276

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 277 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQLDFEQTMKLVADIRFDT 336

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    +TQ    
Sbjct: 337 SYSFIYSSRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 379


>gi|312868325|ref|ZP_07728525.1| radical SAM protein, TIGR01212 family [Streptococcus parasanguinis
           F0405]
 gi|311096070|gb|EFQ54314.1| radical SAM protein, TIGR01212 family [Streptococcus parasanguinis
           F0405]
          Length = 316

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 42  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDKVEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        I LG+Q+  E +   +
Sbjct: 99  IRERYEQAINEPGVVGINIGTRPDCLPDETLAYLAELTERMHVTIELGLQTTYETTSELI 158

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +D + L+
Sbjct: 159 NRAHSYDLYVETVKRIRQQVPKAEIVSHLINGLPGETHEMMVENVRRCVTDNEIDGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 219 LLHLMTNTRMQRDYHEGRLQLMSQEEYVKVICDQLEIIPKHIVIH 263


>gi|332654850|ref|ZP_08420592.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ruminococcaceae bacterium
           D16]
 gi|332516193|gb|EGJ45801.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ruminococcaceae bacterium
           D16]
          Length = 473

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 20/220 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     +  +RQL           G    S    L
Sbjct: 189 CNNFCSYC-----IVPYVRGRERS-REPQDILAEVRQLVEEGYKDITLLGQNVNSYGKDL 242

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L  + +       +   + ++P       F+   +       + L  Q+  
Sbjct: 243 ENPMDFADLLAKVNEIPG--DFLIRFMTSHPKDATQKLFETMARCEKVAPVLHLPFQAGN 300

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H   + +  I   + + P +    D+I   P +T  ++E  L+       
Sbjct: 301 DRILKVMNRRHTREQYLEKIRALKALIPDIVLTSDVIVGFPGETTEEFEDTLKVLEEVRY 360

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           D L  +  +   GT   KM    D  +P E    +   L 
Sbjct: 361 DALFTFIYSPRVGTPAAKM----DDPMPREEKLANFNRLV 396


>gi|262172028|ref|ZP_06039706.1| tRNA-i(6)A37 methylthiotransferase [Vibrio mimicus MB-451]
 gi|262402694|ref|ZP_06079255.1| tRNA-i(6)A37 methylthiotransferase [Vibrio sp. RC586]
 gi|261893104|gb|EEY39090.1| tRNA-i(6)A37 methylthiotransferase [Vibrio mimicus MB-451]
 gi|262351476|gb|EEZ00609.1| tRNA-i(6)A37 methylthiotransferase [Vibrio sp. RC586]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 211 -HDGEICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 330 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 377


>gi|197284347|ref|YP_002150219.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Proteus
           mirabilis HI4320]
 gi|227358509|ref|ZP_03842834.1| 2-methylthioadenine synthase [Proteus mirabilis ATCC 29906]
 gi|229890603|sp|B4EV28|MIAB_PROMH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|194681834|emb|CAR41118.1| MiaB protein (methylthiolation of isopentenylated A37 derivatives
           in rRNA) [Proteus mirabilis HI4320]
 gi|227161220|gb|EEI46294.1| 2-methylthioadenine synthase [Proteus mirabilis ATCC 29906]
          Length = 476

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 72/233 (30%), Gaps = 22/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCSFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGETF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     I     +P     +    Y      V+ + L VQS
Sbjct: 214 ---DGQICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIAVYEDTPELVSFLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + RNH A E  + I   R   P +  S D I   P +T   +E  ++     
Sbjct: 271 GSDRILTLMKRNHTALEYKSIIRKLRKARPDILISSDFIIGFPGETQDDFEKTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             D    +  +   GT    +  D       E     LY L Q I      ++
Sbjct: 331 NFDMSFSFIYSARPGTPAADLPDDVS----EEEKKQRLYLLQQRINQQAMNYS 379


>gi|157373597|ref|YP_001472197.1| radical SAM domain-containing protein [Shewanella sediminis
           HAW-EB3]
 gi|157315971|gb|ABV35069.1| radical SAM domain protein [Shewanella sediminis HAW-EB3]
          Length = 309

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 18/242 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +CD   +    K  +   +     ++  + +    RS+  +F   G    +    + 
Sbjct: 45  RCTFCD--MYTAPQKRFRAQKLDKIAADIIAVAE--TGRSVHRVFLADGDAMSLPFDRLE 100

Query: 91  LILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            I   I ++   V+      +  N  +         +  G++ + +G +S +++ LR + 
Sbjct: 101 AICLLIREHLPDVTRISSYCLPRNLKNKTSEELSRLKALGLSLLYIGCESGDDEVLRRIE 160

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQL 207
           +  +   ++AA+   +    + S  ++  L     +        +   +   ++LS   +
Sbjct: 161 KGESFDSSLAALKKIKAAGIKSSVMILNGLGGTELSTQHAINSAKLMNASQPEYLSTLVV 220

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+  GT       DG   LP ++      +                         S H  
Sbjct: 221 TLPLGTERMDASFDGHFQLPDQHGLFVEMHTLLKHLELD-----------KTIFRSDHAS 269

Query: 268 NY 269
           NY
Sbjct: 270 NY 271


>gi|52140755|ref|YP_086074.1| Fe-S oxidoreductase [Bacillus cereus E33L]
 gi|51974224|gb|AAU15774.1| conserved hypothetical protein; possible Fe-S oxidoreductase
           [Bacillus cereus E33L]
          Length = 319

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|149186041|ref|ZP_01864355.1| 2-methylthioadenine synthetase [Erythrobacter sp. SD-21]
 gi|148830072|gb|EDL48509.1| 2-methylthioadenine synthetase [Erythrobacter sp. SD-21]
          Length = 449

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V  Y  G E  I     ++    +         I   G   S    +
Sbjct: 161 CDKFCTYC-----VVPYTRGAE--ISRPYADLVTEAKKLVDAGAKEITLLGQNVSAWSGE 213

Query: 88  NIAL----ILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +       +   I     V     I     +P+ ++ +    + +    +  + L VQ+ 
Sbjct: 214 DEKGHRVGLAGLIRDLAKVDGLARIRYTTSHPADMDDDLIAAHGEIDKLMPFLHLPVQAG 273

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H A   +  +    A      +S D I   P +T  ++E  L       
Sbjct: 274 SDRVLKAMNRSHTAESYLKLLDRFRAARPDLALSGDFIVGFPGETDAEFEETLALVDEVR 333

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT    M       +  E +      L +   + +
Sbjct: 334 YAQAFSFKYSPRPGTPAATMDGQVSKEVMDERLQRLQAALNRDQLAFN 381


>gi|320539647|ref|ZP_08039311.1| putative truncated isopentenyl-adenosine A37 tRNA methylthiolase
           [Serratia symbiotica str. Tucson]
 gi|320030259|gb|EFW12274.1| putative truncated isopentenyl-adenosine A37 tRNA methylthiolase
           [Serratia symbiotica str. Tucson]
          Length = 407

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 66/223 (29%), Gaps = 8/223 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R +              Q   Q     ++          +  +  
Sbjct: 90  CNKYCTFC--VVPYTRGEEVSRPSDDVLFEIAQLAAQGVREVNLLGQNVNAYRATTYDGD 147

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I    + +     +     I     +P     +    Y      V+ + L VQS  ++ 
Sbjct: 148 -ICTFAELLRLVGAIDGIDRIRFTTSHPIEFTDDVIAVYEDTPELVSFLHLPVQSGSDRI 206

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E  A I   R + P    S D I   P +T   +E  L+       D  
Sbjct: 207 LTMMKRAHTALEYKAIIRKLRKVRPNMQFSSDFIIGFPGETQADFEQTLKLIAEVNFDAS 266

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             +  +   GT   +M  D       + + +    + Q +   
Sbjct: 267 FSFIYSPRPGTPAAEMIDDVSEEEKKQRLYILQDRINQQVLQF 309


>gi|311744192|ref|ZP_07717997.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aeromicrobium marinum DSM
           15272]
 gi|311312547|gb|EFQ82459.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Aeromicrobium marinum DSM
           15272]
          Length = 487

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 75/234 (32%), Gaps = 25/234 (10%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  +    +V     C   C +C            ++      L E+
Sbjct: 127 LESLEVFPSTLPTKRDSVFAAWVSISVGCNNTCTFC---IVPALRGKEKDRRPGDVLAEI 183

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       + Q  A +L    +   +         
Sbjct: 184 EALVADGVVEVTLLGQNVNAYGVEFG-------DSQAFAKLLRACGRIEGLERVRF--TS 234

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P     +      +    + ++ + +QS  ++ LR + R++   + +  I   R   P
Sbjct: 235 PHPKDFTDDVIAAMAETPTVMPQLHMPLQSGSDRVLRAMRRSYRREKFLGIIDRVRAAMP 294

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
              ++ D+I   P +T   +   L+   +        +Q +   GT    +   
Sbjct: 295 DAAITTDIIVGFPGETEEDFVQTLEVVRAARFTSAFTFQYSRRPGTPAADLPDQ 348


>gi|291519359|emb|CBK74580.1| SSU ribosomal protein S12P methylthiotransferase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 442

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 24/211 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K+C YC       D+ S      + +    +   + E+  + Q T   ++  +     
Sbjct: 155 CNKRCTYCIIPYIRGDYRSVPMEEILSEAKQLVADGVKEIILVAQET---TVYGMDIY-- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  +++  +L+ + +   +       + A P  +     +         + I + +
Sbjct: 210 -----NKKSLPELLNKLCEIDGLEWIR--ILYAYPEEITDELIECMASQPKICHYIDMPI 262

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ LR +GR  N ++ +      R   P +S    LI   P +T    +  LQ   
Sbjct: 263 QHCNDELLRKMGRKTNKADIMNIAARLREAMPDISLRTTLICGFPGETEEMHQELLQFIK 322

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
               D L  +  + E GT+        D  L
Sbjct: 323 DMQFDRLGAFAYSKEDGTVAATWDNQVDEDL 353


>gi|289167554|ref|YP_003445823.1| hypothetical protein smi_0708 [Streptococcus mitis B6]
 gi|288907121|emb|CBJ21955.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 318

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|257470194|ref|ZP_05634285.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
 gi|317064410|ref|ZP_07928895.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
 gi|313690086|gb|EFS26921.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
          Length = 554

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC             +  ++ + L  ++   ++     I  + F   T + ++ 
Sbjct: 183 CPFNCSYC---------MSSIDKTVRYYSLDRVKEDLKIFLDSPIKLLKFVDRTFN-LKK 232

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
           +    I   + +N+     +    E N +  +            G  +  +GVQ++   +
Sbjct: 233 ERYMEIWKFLLENYR--EGITFHFEINANIFDDETLDFLETVPKGYFQFEIGVQTINPDT 290

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           ++ + RN+   +    +         +  DLI  LP +T   ++   +       + + L
Sbjct: 291 MKSINRNNILDKLAHNVRRINKNI-HLHLDLIAGLPYETYEIFKKSFEYVHDLKPEMIQL 349

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L + +GT  Y   +  +    S+       N   S      L   E
Sbjct: 350 GFLKLLRGTQMYNEAEKYEYKYFSKPPYEVFSNKFISFAEIIKLKNLE 397


>gi|239616755|ref|YP_002940077.1| MiaB-like tRNA modifying enzyme [Kosmotoga olearia TBF 19.5.1]
 gi|239505586|gb|ACR79073.1| MiaB-like tRNA modifying enzyme [Kosmotoga olearia TBF 19.5.1]
          Length = 425

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 24/209 (11%)

Query: 22  YVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           Y+     C+  C YC        N  + +        +++ +    +   +    +I   
Sbjct: 134 YIGIQDGCLNNCSYCRIRLARG-NKIISKPPEVVAEELKTLVEH-GFQEIVLTGINIGFY 191

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VN 131
            FG G            ++  + +   +     + + + +P  V                
Sbjct: 192 GFGEG----------YSLISLLKQLVKIEGEWRLRLSSLDPRLVSNELITFMTDNPKIAQ 241

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            + L +QS  ++ L+ + RN+  ++    + L R+   R SF  D+I   P +T T +  
Sbjct: 242 HVHLSLQSGSDKVLKSMNRNYTTNDVEQIVALFRSRNNRFSFTTDVIVGFPGETDTDFVE 301

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            L+         + +++ +   GT   +M
Sbjct: 302 TLEFVKRIRFLKVHIFRFSPRPGTKAARM 330


>gi|153938300|ref|YP_001391322.1| radical SAM domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|170755571|ref|YP_001781561.1| radical SAM domain-containing protein [Clostridium botulinum B1
           str. Okra]
 gi|152934196|gb|ABS39694.1| radical SAM domain protein [Clostridium botulinum F str. Langeland]
 gi|169120783|gb|ACA44619.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
 gi|295319351|gb|ADF99728.1| radical SAM domain protein [Clostridium botulinum F str. 230613]
          Length = 289

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 91/233 (39%), Gaps = 13/233 (5%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ + 
Sbjct: 27  HNKCSFCS----MYKNEKFRVRELKEIFEDLEESKSYY--RRINRIFLADGDALCLKTET 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L  
Sbjct: 81  LKKILLKIKETHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILED 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QTMTQWEMELQRALSY-AVDHLSLY 205
           + +     E I A   AR    + S  +I  L   +   Q   E  +ALS    D++ L 
Sbjct: 141 INKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWQQHATETGKALSLIDPDYVGLL 200

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
            L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 201 TLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|87199422|ref|YP_496679.1| MiaB-like tRNA modifying enzyme [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87135103|gb|ABD25845.1| MiaB-like tRNA modifying enzyme [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 398

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 68/220 (30%), Gaps = 37/220 (16%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKV------------GQENFIQSFLTEMQWMRQLTGPR 69
            P    C   C +C     + + +               E  I +   E           
Sbjct: 116 IPVQNGCDHSCTFC----IIPQGRGKSVSLPVVDVISAVERAIFALRPERHLTVHEVVLT 171

Query: 70  SISSIFFGGGTPSLIEPQN---IALILDGIAKNWTVSSNVEITIEANPSSVE----VNNF 122
            +    +G   PS   P     IA ILD   +   +  +    +E +P   +        
Sbjct: 172 GVDVTSWGADLPS--GPALGNLIAAILDAFPELPRLRLSSLDGVEIDPLLFDLITGEPRV 229

Query: 123 QGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALP 180
                  +  + L +QS ++  L+ + R H+  +AI  +    AR     +  DLI   P
Sbjct: 230 -------MPHVHLSLQSGDDMVLKRMKRRHSRRDAIELVQRMKARRPDIAVGADLIAGFP 282

Query: 181 KQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            +T       L       + H  ++  +   GT    M +
Sbjct: 283 TETPEMHRNNLSIVRECGIVHGHVFPYSPRPGTPAALMPQ 322


>gi|319409457|emb|CBI83106.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
          Length = 427

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 69/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +    T ++ +++  G      +  G    S    +
Sbjct: 150 CDHRCTFC-----IIPYSRGPSRSVP-MGTIIEQIKKFIGNGVQEIVLTGVDLTSYGADL 203

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
             +  +  ++  I  +      + ++   +   ++          K  +  + L +Q+  
Sbjct: 204 PGKASLGKLVSAILHHVPDLPRLRLS-SIDSIEIDQELIDLLAYEKRIMPYLHLSLQAGS 262

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H    AI       A+        DLI   P +T   ++  L       +
Sbjct: 263 NMILKRMKRRHLRENAIQFCQDLRAKRPTMVYGADLIAGFPTETEEMFQNSLALIDECNL 322

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +  +GT   +M +
Sbjct: 323 THLHVFPFSPREGTPAARMPQ 343


>gi|304437669|ref|ZP_07397621.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369302|gb|EFM22975.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 429

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 75/232 (32%), Gaps = 32/232 (13%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGG------TPSL--- 83
           +C F          +   + +   EM+ +        + + I  G         P+L   
Sbjct: 155 FCSFCIIPYARGPVKSRPLAAVAREMEKLAAAGFREVVLTGIHLGAYGIDLPQRPTLADA 214

Query: 84  ----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
               +  + +  +  G  ++  +S ++   +   P                  + L +Q+
Sbjct: 215 CRTALRTKEVRRLRLGSLESVELSEDLLSLVRTEPRFAP-------------HLHLPLQA 261

Query: 140 LEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  LR + R ++    ++ +A +  A      +S D+I   P +T   +   L    +
Sbjct: 262 GSDNVLRAMNRRYDTAAFAQLLADVRRAVP-GAAISTDIIVGFPGETEEDFTAGLDFVRA 320

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                + ++  +  +GT   +   D          A  +  L + +  A+  
Sbjct: 321 MGFARMHVFPYSARRGTPAARR-TDQIAPPVRRERAARMQALAEEMAEAYHR 371


>gi|296133713|ref|YP_003640960.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296032291|gb|ADG83059.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 482

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 76/232 (32%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C  +   +R    +   ++S  +E++    L     +   F     P+  + +
Sbjct: 202 CQHDCGFCSQHKFWQR--TWRARSVESVTSEIE---HLVKEYGVEIFFISDEYPTA-DRE 255

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD               IE     +  + +    YR+AG+  I +G+++  +++L
Sbjct: 256 RWEKILDW---LIDKQLGAMFLIETRVDDIIRDEDIMHKYRQAGIIHIYVGIEATSQENL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +   A ++  A+ +            +  +P++T    +  L+ A+ Y  D     
Sbjct: 313 DIFNKGIVADDSKRALDIIHAHGIVSETSFVLGIPQETKASIKRTLETAIRYNPDFAHFL 372

Query: 206 QLTIEKGTLFYK-----MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            L        YK     +              +    +T        L  Y+
Sbjct: 373 LLAPWPYADMYKDLKQYIVTTDYARYNLVEPVIKPARMTTDELFMQILKCYQ 424


>gi|317154811|ref|YP_004122859.1| hypothetical protein Daes_3121 [Desulfovibrio aespoeensis Aspo-2]
 gi|316945062|gb|ADU64113.1| conserved hypothetical protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 327

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 85/266 (31%), Gaps = 31/266 (11%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C+  +        +   I +     + + +        + +    
Sbjct: 30  CPNRDGTISTSGCLFCN-PAGSGSGMKDRGLDIPAQWRFWRDIHRKKHRLERFTAYLQSF 88

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK----AGVNRISL 135
           + +      +A  LD +A    +++   ++I   P  ++ +            G+  I+L
Sbjct: 89  SNTYGPIDKLARTLDQLAGLPGLTA---LSIGTRPDCLDPDKLDLLAARRDALGLTDITL 145

Query: 136 --GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP----KQTMTQWEM 189
             G+QS  + +L+ + R H+A     A   A      +   +I  LP    ++  +    
Sbjct: 146 EMGLQSASDTTLKHINRGHDARAFADAACAAHQRGITVVAHVIAGLPTPDGREDQSDLGS 205

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +       V  +  + L + + T   ++H  G     + +  +D  +      S   + 
Sbjct: 206 TIDFINDLPVRGIKFHNLYVARRTPLAQLHAQGGYTPLTLDEYLDHLSHALMRLSPTTVV 265

Query: 250 AYEISN---------HSFLGAESLHN 266
                N                +LHN
Sbjct: 266 HRLNGNPSSGELVAPDWAANMRALHN 291


>gi|238790782|ref|ZP_04634541.1| hypothetical protein yfred0001_12920 [Yersinia frederiksenii ATCC
           33641]
 gi|238721140|gb|EEQ12821.1| hypothetical protein yfred0001_12920 [Yersinia frederiksenii ATCC
           33641]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 215 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTMKLVADVHFDT 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  D       + + +    +TQ    
Sbjct: 333 SYSFIYSSRPGTPAADLPDDVSEDEKKQRLHILQQRITQQAME 375


>gi|21231765|ref|NP_637682.1| hypothetical protein XCC2328 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768109|ref|YP_242871.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188991239|ref|YP_001903249.1| hypothetical protein xccb100_1844 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|81305914|sp|Q4UVS2|MIAB_XANC8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81793688|sp|Q8P8B5|MIAB_XANCP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891032|sp|B0RRW2|MIAB_XANCB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|21113472|gb|AAM41606.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573441|gb|AAY48851.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732999|emb|CAP51197.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 485

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 71/223 (31%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K C +C       R +     F    +   Q  
Sbjct: 167 IEKFDRLPEPRADGP-SAFVSIMEGCSKYCSFC--VVPYTRGEEVSRPFEDVLVEVAQLA 223

Query: 63  RQLTGPRSISSI------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            Q  G R I+ +      + G       EP   A +   I     +     I     +P 
Sbjct: 224 AQ--GVREINLLGQNVNAYRGAYGADAGEPAQYADLGLLIRTIAQIDGIGRIRFTTSHPL 281

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
               +    YR      N + L VQ+  ++ L  + R + A E  + I   R + P +S 
Sbjct: 282 EFSDSLVDAYRDVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISI 341

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             D I   P +T   ++  ++       D    +  +   GT 
Sbjct: 342 SSDFIVGFPGETDADFDKTMKLIEDVGFDQSFSFIYSRRPGTP 384


>gi|315651392|ref|ZP_07904417.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saburreum DSM
           3986]
 gi|315486351|gb|EFU76708.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saburreum DSM
           3986]
          Length = 485

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 16/207 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +        ++ L        +  G    S    +
Sbjct: 200 CNNFCSYC-----IVPYVRGKERS-RKPEEITDEIKGLVADGVKEVMLLGQNVNSYGKGL 253

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           + + N A++LD +AK   +       +  +P  +     +  +        + L +QS  
Sbjct: 254 DEKTNFAMLLDEVAKIDGLERLRF--MTPHPKDLSDEVIEVMKNNKKICKHLHLPLQSGS 311

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +     +  +   +   P +S   D+I   P +T   +   L        
Sbjct: 312 SAILKKMNRVYTKESYLDLVKRIKAAIPDISLTTDIIVGFPGETEEDFLDTLDVVKQVRY 371

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           D    +  +   GT   KM +  D  +
Sbjct: 372 DSAFTFIYSKRSGTPAAKMEEQIDPDI 398


>gi|304393798|ref|ZP_07375723.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ahrensia sp. R2A130]
 gi|303293997|gb|EFL88372.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ahrensia sp. R2A130]
          Length = 477

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 51/118 (43%), Gaps = 4/118 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAGVNR--ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P  +  +  + +R        + L VQ+  ++ L+ + R H +++ ++ I+  R  
Sbjct: 255 VTSHPRDMADDLIEAHRDLDCLMPYLHLPVQAGSDKILKSMNRGHTSADYLSIINRVREA 314

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            P ++   D+I   P +T   +E  ++            ++ ++  GT   +M    D
Sbjct: 315 RPDIAISGDMIVGFPGETDDDFEATMEIVRQTNYAACYSFKYSMRPGTPGAEMTDQVD 372


>gi|260590025|ref|ZP_05855938.1| radical SAM protein [Blautia hansenii DSM 20583]
 gi|331084341|ref|ZP_08333445.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260539537|gb|EEX20106.1| radical SAM protein [Blautia hansenii DSM 20583]
 gi|330401605|gb|EGG81186.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 314

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSI--FFGGGTPSLIEPQN 88
           C +C              +   S   +++     +   R ++    +F   T +      
Sbjct: 47  CIFCS----AGGSGDFAGSRQDSITQQIEKQAASIRQKRGVAKFIAYFQAYTNTYAPVDY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I      +  +   V I+I   P  +  +  Q   +    +   + LG+Q++ E + 
Sbjct: 103 LRKIYTEAISHPDI---VAISIGTRPDCLGEDILQLLDELNQKKPVWVELGLQTIHETTA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R++ R +  S    A+   R     +    I  LP ++       ++      +  + L 
Sbjct: 160 RYIRRGYPLSCFEQAVSELRKRNLDVIVHTILGLPGESKNDILSTIEYLNHGDIQGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            L + KGT   + +  G   + S    +    L       
Sbjct: 220 LLHVLKGTDLAEDYLAGKFQVYSMEEYL---ELVIDCLEH 256


>gi|254474407|ref|ZP_05087793.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. R11]
 gi|214028650|gb|EEB69485.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. R11]
          Length = 440

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E + + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREARDLVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  -LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
             +    +   LD +     +         ++P+ ++ +  + +      +  + L VQ+
Sbjct: 215 GDMTLAQLIWELDKVDGLERIR-----FTTSHPNDMQDDLIEAHGTCAKLMPYLHLPVQA 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A   I  I   R   P   +S D I   P++T   ++  +      
Sbjct: 270 GSDKILKRMNRAHTAESYIRLIERIRAARPDILISGDFIVGFPEETEEDFQATMDLVEEV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT   + 
Sbjct: 330 KYGTAYSFKYSTRPGTPAAER 350


>gi|122879210|ref|YP_201405.6| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|229891224|sp|Q5GZ51|MIAB_XANOR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 484

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 64/196 (32%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSL 83
           C  YC F      R +     F    +   Q   Q  G R I+ +      + G      
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGAYGADA 247

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +P   A +   I     +     I     +P     +    YR      N + L VQ+ 
Sbjct: 248 GDPAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|114770160|ref|ZP_01447698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HTCC2255]
 gi|114548997|gb|EAU51880.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HTCC2255]
          Length = 442

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 26/233 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K   +C F              +   L  +   R L   G R I+ +      + G  
Sbjct: 159 CDK---FCAFCVVPFTRGAEVSRPV---LQIINEARDLVERGVRDITLLGQNVNAYHGAM 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            S     N+  ++  ++K   +      T  ++P+ +       + +    +  + L VQ
Sbjct: 213 KS--GDANLPQLIKELSKIEELKRIRFTT--SHPNDMTQELIDAHGEMEKLMPYLHLPVQ 268

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R H A   +  I   R   P ++   D I   P +T   +E  L+    
Sbjct: 269 SGSDKILKGMNRKHTAKSYLEVIENLRVARPDIALSGDFIVGFPGETDEDFEQTLELVRE 328

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                   ++ +   GT         +     E +  +  +  Q++ S H   
Sbjct: 329 VKYAQAYSFKYSTRPGT-----PAAENKNQVPEEIKSERLSRLQALLSQHQKE 376


>gi|108808470|ref|YP_652386.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pestis Antiqua]
 gi|108811270|ref|YP_647037.1| tRNA-thiotransferase [Yersinia pestis Nepal516]
 gi|165925283|ref|ZP_02221115.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937683|ref|ZP_02226245.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008584|ref|ZP_02229482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212269|ref|ZP_02238304.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167422525|ref|ZP_02314278.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423482|ref|ZP_02315235.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|294504424|ref|YP_003568486.1| tRNA-thiotransferase [Yersinia pestis Z176003]
 gi|108774918|gb|ABG17437.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Yersinia pestis Nepal516]
 gi|108780383|gb|ABG14441.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Yersinia pestis Antiqua]
 gi|165914433|gb|EDR33048.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922890|gb|EDR40041.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992966|gb|EDR45267.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206200|gb|EDR50680.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958539|gb|EDR55560.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167057652|gb|EDR67398.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|262362586|gb|ACY59307.1| tRNA-thiotransferase [Yersinia pestis D106004]
 gi|262366410|gb|ACY62967.1| tRNA-thiotransferase [Yersinia pestis D182038]
 gi|294354883|gb|ADE65224.1| tRNA-thiotransferase [Yersinia pestis Z176003]
          Length = 479

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 162 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 219

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 220 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 277

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 278 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 337

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 338 SYSFIYSPRPGTPAADLPNNVSEEEKKQRLHILQQRISQQAME 380


>gi|58426983|gb|AAW76020.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 550

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 64/196 (32%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSL 83
           C  YC F      R +     F    +   Q   Q  G R I+ +      + G      
Sbjct: 256 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGAYGADA 313

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +P   A +   I     +     I     +P     +    YR      N + L VQ+ 
Sbjct: 314 GDPAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 373

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 374 SDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 433

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 434 FDQSFSFVYSRRPGTP 449


>gi|149365479|ref|ZP_01887514.1| putative tRNA-thiotransferase [Yersinia pestis CA88-4125]
 gi|218929701|ref|YP_002347576.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pestis CO92]
 gi|229838168|ref|ZP_04458327.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229898721|ref|ZP_04513866.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229901508|ref|ZP_04516630.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           Nepal516]
 gi|122959987|sp|Q0WDR2|MIAB_YERPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891218|sp|Q1CKP3|MIAB_YERPN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891220|sp|Q1C531|MIAB_YERPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115348312|emb|CAL21243.1| putative tRNA-thiotransferase [Yersinia pestis CO92]
 gi|149291892|gb|EDM41966.1| putative tRNA-thiotransferase [Yersinia pestis CA88-4125]
 gi|229681437|gb|EEO77531.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           Nepal516]
 gi|229688269|gb|EEO80340.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229694534|gb|EEO84581.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           biovar Orientalis str. PEXU2]
          Length = 474

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 215 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 333 SYSFIYSPRPGTPAADLPNNVSEEEKKQRLHILQQRISQQAME 375


>gi|258627068|ref|ZP_05721864.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580586|gb|EEW05539.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 453

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 136 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 189

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 190 -HDGEICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 248

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 249 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 308

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 309 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 356


>gi|168181641|ref|ZP_02616305.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|237796408|ref|YP_002863960.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
           str. 657]
 gi|182675137|gb|EDT87098.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|229261767|gb|ACQ52800.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
           str. 657]
          Length = 432

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 68/202 (33%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC   F       K  ++          +  +       +S I        L  
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPEKIM----EEVEKLSKHGFKEIILSGIDIASYGFDLEG 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQ 143
             N+  IL+ I K   +      +I  +P+        G    K       L +QS   +
Sbjct: 208 KYNLTSILEEIDKVEGIERIRIGSI--DPTFFTEEEIIGISKLKRFCPHFHLSLQSGCNE 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R +   +    +H  R     +S   D+I   P +T  ++    +      +  
Sbjct: 266 TLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPGETEEEFNKTYEFLKGIKLSK 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ +  KGT   +M    D
Sbjct: 326 MHVFKFSPRKGTRAEEMKNQVD 347


>gi|262165204|ref|ZP_06032941.1| tRNA-i(6)A37 methylthiotransferase [Vibrio mimicus VM223]
 gi|262024920|gb|EEY43588.1| tRNA-i(6)A37 methylthiotransferase [Vibrio mimicus VM223]
          Length = 461

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 144 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 197

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 198 -HDGEICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 256

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 257 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 316

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 317 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 364


>gi|225028476|ref|ZP_03717668.1| hypothetical protein EUBHAL_02753 [Eubacterium hallii DSM 3353]
 gi|224954226|gb|EEG35435.1| hypothetical protein EUBHAL_02753 [Eubacterium hallii DSM 3353]
          Length = 345

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 58/195 (29%), Gaps = 17/195 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     E +  S    +            + +  GG  P     
Sbjct: 61  YCKNNCYYCG----IRRDNRNVERYRLSEEEILACCANGEKLGFRTFVLQGGEDP----W 112

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                I D + K      +  IT+           ++ +++AG +R  L  ++       
Sbjct: 113 YTQERIADIVKKIKKAHPDCAITLSV--GEKSKEIYKAWKEAGADRYLLRHETANTSHYH 170

Query: 147 FLGRNHNASEAI----AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            L   H  S  +      ++  + +  ++    +   P QT      +L          +
Sbjct: 171 ML---HPESMHLSNRKQCLYDLKELGYQVGAGFMVGSPGQTWEHLAEDLVFLQELQPQMV 227

Query: 203 SLYQLTIEKGTLFYK 217
            +        T F K
Sbjct: 228 GIGPFIPHHDTKFAK 242


>gi|169824473|ref|YP_001692084.1| Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
 gi|167831278|dbj|BAG08194.1| Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
          Length = 430

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 71/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-GTPSL--- 83
           C + C YC     +   +    +     + ++    +         I   G    S    
Sbjct: 152 CSQFCSYC----IIPYARGPIRS---RNIRDIVLEAKRLADNGFKEIVLTGIHVASYGKD 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
            + ++I  ++D I     +     I + +  P  V+          +   +   L +QS 
Sbjct: 205 FDNKDIG-LIDVIEDISNIDKLKRIRLSSLEPRIVDKKFLDRLSQVEQFCDHFHLSLQSG 263

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R ++       I+L R  +P   ++ D+I   P +T   +E  L       
Sbjct: 264 SDSILQSMNRKYDTHLYERTINLIREYYPNAAITTDIIVGFPGETDEDFEQTLNFVDKIK 323

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + +++ +  KGT+  KM
Sbjct: 324 FSKIHVFKYSNRKGTVASKM 343


>gi|15375026|gb|AAK94786.1| hypothetical protein [Klebsiella aerogenes]
          Length = 198

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 12/162 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+  S        +    +S   ++    QL         +F   T +      + +
Sbjct: 45  CTFCNVASFA-----DEAQQHRSIAEQLAHQAQLVNRAKRYLAYFQAYTSTF---AEVQV 96

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRI-SLGVQSLEEQSLRF 147
           +     +  + ++ V + +   P  V         +    G      LG+Q+  +++L  
Sbjct: 97  LRSMYRQAVSAANIVGLCVGTRPDCVPQAVLDLLSEYHQQGYEVWLELGLQTAHDKTLHR 156

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           + R H+ +       LAR    ++   LI  LP ++      
Sbjct: 157 INRGHDFACYQRTARLARERGLKVCAHLIVGLPGESQGHCLQ 198


>gi|46201319|ref|ZP_00055284.2| COG0621: 2-methylthioadenine synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 418

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 27/206 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---------- 77
           C  +C +C     +  +  G    +      ++ +++L        +  G          
Sbjct: 144 CDHRCTFC-----IIPFGRGPNRSVP-MGRIVEQIKELVAGGFNEVVLTGVDVTAYGADL 197

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
            G P L   Q +  +L  + +   +          +P  V+             +    L
Sbjct: 198 PGKPGL--GQLVRRLLAALPELPRLR-----LSSLDPVEVDEELLTAMASEPRLLPHFHL 250

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQ+ ++  L+ + R H  S+ IA     R + P   +  D+I   P +    +   L+ 
Sbjct: 251 SVQAGDDTILKRMKRRHLRSDVIALAARIRALRPDAVLGADIIAGFPTEDEAMFGRSLEL 310

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                + HL ++  +   GT   +M 
Sbjct: 311 VDEAGLTHLHVFPFSARPGTPAARMP 336


>gi|302389750|ref|YP_003825571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermosediminibacter
           oceani DSM 16646]
 gi|302200378|gb|ADL07948.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermosediminibacter
           oceani DSM 16646]
          Length = 439

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 60/209 (28%), Gaps = 26/209 (12%)

Query: 28  CVKKCPYCDFNSHV--------RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC     V         R        ++    +      L G    S     GG
Sbjct: 157 CNNFCTYC----IVPYVRGREKSRNPEDIVREVEELAKQGFKEINLLGQNVNSYGKDLGG 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
             +   P+ +  +         +     I     +P  +        R        I L 
Sbjct: 213 AVTF--PELLRRL-------NDIDGIERIRFTTSHPKDLSDELIYAMRDCKKVCEHIHLP 263

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQ+   + L  + R +     +  +   R+    +  S D+I   P +T   ++  L   
Sbjct: 264 VQAGSNRILEAMNRRYTREHYMELVKKLRDAISDIAISTDIIVGFPGETEEDFQDTLDLV 323

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                D   ++  +  KGT   +M    D
Sbjct: 324 RRVEYDQAFMFVYSKRKGTPAAEMENQVD 352


>gi|75760978|ref|ZP_00740984.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491542|gb|EAO54752.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 515

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC            +    +  + E++ +    G + I+    ++   G     
Sbjct: 236 CDKFCTYC---IVPYTRGKERSRRPEDIIQEIRHLAA-NGYKEITLLGQNVNAYGKDFED 291

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +E   +  ++D + K   V         ++P   + +  +   K G  V  I L VQS  
Sbjct: 292 VE-YGLGDLMDELRK---VDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGS 347

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++    +  +   +   P   ++ D+I   P +T  Q+E  +        
Sbjct: 348 TDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGF 407

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 408 DTAFTFIYSPREGTPAAKM 426


>gi|303237126|ref|ZP_07323696.1| MiaB-like protein [Prevotella disiens FB035-09AN]
 gi|302482513|gb|EFL45538.1| MiaB-like protein [Prevotella disiens FB035-09AN]
          Length = 452

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 84/255 (32%), Gaps = 19/255 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C   C YC   +        +   IQS + + +   +  G   + + +  G  G  +   
Sbjct: 170 CNYFCTYC---TIPYARGFSRNPTIQSLVEQAEQAAKEGGKEIVLTGVNIGDFGRTTSES 226

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
             ++   LD +                 P  ++    +     +A +    + +QS  ++
Sbjct: 227 FLDLVKALDQVEGIERFR-----ISSLEPDLIDDELIRYCATSRAFMPHFHIPLQSGSDE 281

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++ +     I+L + I P   +  D++     +    ++       S  +  
Sbjct: 282 VLKLMHRRYDTALFAHKINLIKEITPDAFIGVDVMVGCRGEEPQYFDDCYNFLSSLPITQ 341

Query: 202 LSLYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           L ++  +   GT    +    D       +  +      +T    + H     E+     
Sbjct: 342 LHVFPYSERPGTSALSIPYVVDEKEKKCRARQLLQLSDEMTHKFYAEHIGKEAEVLLEKA 401

Query: 259 LGAESLH--NLNYWR 271
           +  +S+H    NY R
Sbjct: 402 VRGKSMHGFTKNYIR 416


>gi|302380512|ref|ZP_07268977.1| MiaB-like protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311455|gb|EFK93471.1| MiaB-like protein [Finegoldia magna ACS-171-V-Col3]
          Length = 430

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 71/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-GTPSL--- 83
           C + C YC     +   +    +     + ++    +         I   G    S    
Sbjct: 152 CSQFCSYC----IIPYARGPIRS---RNIRDIVLEAKRLADNGFKEIVLTGIHVASYGKD 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
            + ++I  ++D I     +     I + +  P  V+          +   +   L +QS 
Sbjct: 205 FDNKDIG-LIDVIEDIANIDKIKRIRLSSLEPRIVDKKFLDRLSQVEQFCDHFHLSLQSG 263

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R ++       I+L R  +P   ++ D+I   P +T   +E  L       
Sbjct: 264 SDSILQSMNRKYDTHLYERTINLIREYYPNAAITTDIIVGFPGETDEDFEQTLNFVDKIK 323

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + +++ +  KGT+  KM
Sbjct: 324 FSKIHVFKYSNRKGTVASKM 343


>gi|227114980|ref|ZP_03828636.1| hypothetical protein PcarbP_18561 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 71/232 (30%), Gaps = 24/232 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K   YC F                  L E+  +    G R ++ +      + G    
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGETYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +     +  ++  I        +      ++P     +    Y      V+ + L VQ
Sbjct: 213 GEICSFAELLRLVAAIDGI-----DRVRFTTSHPIEFTDDIISVYEDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H A E  A I    N      +S D I   P +T   +E  ++    
Sbjct: 268 SGSDRVLTMMKRRHTALEYKAIIRKLHNARPGILISSDFIVGFPGETQADFEQTMKLITD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              D    +  +   GT    M       +P E     LY L + IT     
Sbjct: 328 VNFDMSYSFVYSARPGTPAADMVD----DVPEEEKKQRLYLLQERITQQAMR 375


>gi|213963289|ref|ZP_03391546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sputigena
           Capno]
 gi|213954151|gb|EEB65476.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sputigena
           Capno]
          Length = 482

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 80/236 (33%), Gaps = 29/236 (12%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C   F    R  +  ++ +  S L E+  ++        L G    S +++GG
Sbjct: 178 CDNMCTFCIVPF---TRGRERSRDPY--SILNEIADLQARGFKEVTLLGQNVDSYLWYGG 232

Query: 79  G---TPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           G     S             A +LD +A           T  +NP  + ++      K  
Sbjct: 233 GLKKDFSKASEMQQATAINFAKLLDMVATAQPEMRIRFST--SNPQDMTLDVIDTMAKHP 290

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L VQS   + L+ + R H   E    I   R   P   +S D+I   P +T  
Sbjct: 291 NICKYIHLPVQSGSNRILKAMNRLHTREEYFTLIDSIRERIPECAISQDMIAGFPTETEE 350

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                L        D   ++  +   GTL  +  +D       +    ++ +L Q 
Sbjct: 351 DHRDTLSLMEYVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQK 406


>gi|167399273|ref|ZP_02304797.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|270489694|ref|ZP_06206768.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis KIM D27]
 gi|167051777|gb|EDR63185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|270338198|gb|EFA48975.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis KIM D27]
          Length = 482

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 165 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 222

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 223 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 280

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 281 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 340

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 341 SYSFIYSPRPGTPAADLPNNVSEEEKKQRLHILQQRISQQAME 383


>gi|330963484|gb|EGH63744.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 442

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F                  ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLTEVTHLAEHGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +  + + +A + D I     V     I     +P     +  Q +      V  + L
Sbjct: 206 YRGTTYDGR-VADLADLIRAVAVVDGIDRIRYTTSHPLEFSDSLIQAHADVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDAGFDFSFSFIYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|295092927|emb|CBK82018.1| MiaB-like tRNA modifying enzyme [Coprococcus sp. ART55/1]
          Length = 452

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C + C YC     +  Y  G+    +S    +  + +L        +  G    S     
Sbjct: 167 CNQFCSYC-----IIPYVRGRIRS-RSQEAILAEVSELAEAGIKEVVLTGIHISSYGKDK 220

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  +++ I+K   +      ++E  P  +     +             L +QS  
Sbjct: 221 NNEGALIELIEAISKIKGIKRIRLGSLE--PGIITEEFVERISSNSKVCPHFHLSLQSGC 278

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R +   +      + R  +    ++ D+I   P +T  ++   ++      +
Sbjct: 279 DSVLKRMNRKYTCEQYFEKCDMLRKAYKSPALTTDVIVGFPGETEEEFAETVRYLTELNL 338

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             + +++ +  KGT+   M
Sbjct: 339 YEMHIFKYSPRKGTVAAAM 357


>gi|293400579|ref|ZP_06644724.1| radical SAM domain-containing protein [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305605|gb|EFE46849.1| radical SAM domain-containing protein [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 316

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 68/205 (33%), Gaps = 21/205 (10%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQ---WMRQLTGPRSI----SSIFFGGGTPSLI 84
           C +C          +G   +  +   ++      RQ    R      S  +F   T +  
Sbjct: 54  CTFCG--------SLGSGEYAGNLQDDLMKQFMDRQQMMLRKWPNGGSIAYFQAYTNTYA 105

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLE 141
               +  +             + ++I      +E +           +   I LG+QS+ 
Sbjct: 106 P---LHELKHCFQPFMERKDVLALSIATRADCLEDDKLAYLHSLCKEKDIWIELGLQSIY 162

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +Q+ +   R H  ++ +  +        +++  LI +LP +T        +   +  +  
Sbjct: 163 DQTAQHCNRGHTYAQFLDCLQRLAKTDIKVAVHLINSLPYETTDMMLESAKALATLPIHA 222

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVL 226
           L L+ L I + T     +++    L
Sbjct: 223 LKLHMLHIMQDTQMAIEYENQPFPL 247


>gi|257439153|ref|ZP_05614908.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
           prausnitzii A2-165]
 gi|257198404|gb|EEU96688.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
           prausnitzii A2-165]
          Length = 409

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 76/230 (33%), Gaps = 19/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C ++C YC      R     +     S L E++ +   +G R +         PS  L  
Sbjct: 130 CNRQCAYC---VIPRARGPVRSRAEDSILKELRQLAA-SGYREVVLSAI--SLPSYGLDT 183

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
             N+  +++  A+   +      ++  +P  +           +    +  L +QS    
Sbjct: 184 GTNLVELVEKCAQVEGIERIRLGSL--DPDMLTPEFITRLAAVEKLCPQFHLSLQSGCTS 241

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP----RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +LR + R + A +    +   R  +       + D I   P +T   +E           
Sbjct: 242 TLRRMRRVYTAEQYAQVVDQIRAAYGERPVSFTTDCICGFPGETQADFEESCAFLKKIGF 301

Query: 200 DHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             + ++  +   GT    F     + +    S  +      + + + +AH
Sbjct: 302 LKVHVFPYSRRSGTPAYDFPAQVHEREKQARSREMNALAEEVRREVLAAH 351


>gi|227327390|ref|ZP_03831414.1| hypothetical protein PcarcW_08718 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 71/232 (30%), Gaps = 24/232 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K   YC F                  L E+  +    G R ++ +      + G    
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGETYD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +     +  ++  I        +      ++P     +    Y      V+ + L VQ
Sbjct: 213 GEICSFAELLRLVAAIDGI-----DRVRFTTSHPIEFTDDIISVYEDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H A E  A I    N      +S D I   P +T   +E  ++    
Sbjct: 268 SGSDRVLTMMKRRHTALEYKAIIRKLHNARPGILISSDFIVGFPGETQADFEQTMKLIAD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              D    +  +   GT    M       +P E     LY L + IT     
Sbjct: 328 VNFDMSYSFVYSARPGTPAADMVD----DVPEEEKKQRLYLLQERITQQAMR 375


>gi|167754516|ref|ZP_02426643.1| hypothetical protein CLORAM_00017 [Clostridium ramosum DSM 1402]
 gi|167705348|gb|EDS19927.1| hypothetical protein CLORAM_00017 [Clostridium ramosum DSM 1402]
          Length = 481

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 72/208 (34%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E        ++         + +  +   G     +  Q
Sbjct: 199 CNKFCTYC-----IVPYTRGKER--SRLAKDI--------IKEVEELVAEGYQEITLLGQ 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEAN----------PSSVEVNNFQGYRKAG--VNRISL 135
           N+      + +++  S+ +E   + N          P     +  +   K    +  I L
Sbjct: 244 NVNSYGKDLGEDYNFSNLLEDVAKTNIPRIRFTTSHPWDFSEDMIKIIAKYDNIMPAIHL 303

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS   + L+ +GR ++  + +   H  +   P   ++ D+I   P +T  Q+   L  
Sbjct: 304 PVQSGNNEVLKLMGRRYSREQYLELFHKIKEYIPDCTVTTDIIVGFPNETHEQYLDTLSL 363

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                 D    +  +   GT   KM  +
Sbjct: 364 YQECEYDLAYTFVYSPRAGTPAAKMVDN 391


>gi|158338885|ref|YP_001520062.1| radical SAM domain-containing protein [Acaryochloris marina
           MBIC11017]
 gi|158309126|gb|ABW30743.1| radical SAM domain protein [Acaryochloris marina MBIC11017]
          Length = 478

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 9/198 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  +    ++  ++   EM+  + L G  ++    F   T ++ +P+
Sbjct: 207 CPAKCSFCLWPQTIGGHNYRAKSP-EAVGKEMEQAKYLFGD-TVREYMFDDDTFTIDKPR 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  +    K   ++ +          +++ +  +  R  G+  + +G +S  +Q L  
Sbjct: 265 AIA--ISEHLKRLKLTWSCNARA-----NLDYDTLKQLRDNGLRLLLVGFESGNQQILDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +   R +   +    I  LP ++    E  ++ A       + +   
Sbjct: 318 INKGIKLEVARKFMANCRKLGITVHGTFIIGLPNESQETIEETIRFACEVNPHTIQVSIA 377

Query: 208 TIEKGTLFYKMHKDGDLV 225
               GT  Y   K+ +  
Sbjct: 378 APYPGTALYAQAKENNWF 395


>gi|156973539|ref|YP_001444446.1| hypothetical protein VIBHAR_01230 [Vibrio harveyi ATCC BAA-1116]
 gi|229891025|sp|A7N1G9|MIAB_VIBHB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|156525133|gb|ABU70219.1| hypothetical protein VIBHAR_01230 [Vibrio harveyi ATCC BAA-1116]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 75/234 (32%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P   +S D I   P +T   ++  ++       
Sbjct: 271 DRVLTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT       D    L  +     LY L Q++ +    ++ ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLSEQVKKERLYELQQTVNTQAMRYSRQM 380


>gi|320016175|gb|ADV99746.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 215 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 333 SYSFIYSPRPGTPAADLPNNVSEEEKKQRLHILQQRISQQAME 375


>gi|294782506|ref|ZP_06747832.1| radical SAM protein family [Fusobacterium sp. 1_1_41FAA]
 gi|294481147|gb|EFG28922.1| radical SAM protein family [Fusobacterium sp. 1_1_41FAA]
          Length = 305

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++  +    ++  + +          +F   T +  E   +  
Sbjct: 43  CIFCSENGSGDFTATKLKSIHEQIEEQIDLVSKKYKGDK-YIAYFQNFTNTYAEVSYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I      +  +   V + I   P  +  +  +   +        + LG+Q++ +   ++ 
Sbjct: 102 IYQEALSHEKI---VGLAIATRPDCLGDDVLELLAELNKKTFLWVELGLQTVNDDVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +       A      +  +    +I  LPK+    +      A +     + L+ + 
Sbjct: 159 NRAYETEIYKEASEKLNRLNIKFVTHIIIGLPKEEEDDYLKTAIFAQNCGTWGIKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + K T   K++ +GDL + ++  
Sbjct: 219 VVKNTPLEKLYLNGDLKVNTKEE 241


>gi|158292783|ref|XP_314113.4| AGAP005211-PA [Anopheles gambiae str. PEST]
 gi|157017155|gb|EAA09381.5| AGAP005211-PA [Anopheles gambiae str. PEST]
          Length = 553

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 76/246 (30%), Gaps = 37/246 (15%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------- 74
            P    C+  C YC       + K  + + +   + E+    Q      +  I       
Sbjct: 210 IPINSGCLNACTYC-------KTKFARADLVSYPVQEIVDRAQQVFQDGVCEIWLTSEDT 262

Query: 75  -FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---- 129
             +G    S + P+ +  +++       +     + +        + +     K      
Sbjct: 263 GTYGRDIGSSL-PELLWQLVEV------IPEGCMMRLGMTNPPYILEHLDEMAKILSHPR 315

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQ 186
             + + + VQS  +  L  + R +   +    +    A+     ++ D+I   P +T   
Sbjct: 316 VYSFLHIPVQSGSDAILGEMRREYCVKDFERMVDFLRAQVPGITIATDIICGFPGETEAD 375

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  L     Y    L + Q     GT   KM       +P+  V      LT    S  
Sbjct: 376 FDDTLALCEKYQFPSLFINQFFPRPGTPAAKM-----TKVPANEVKTRTKRLTDLFHSYE 430

Query: 247 GLHAYE 252
               YE
Sbjct: 431 PYKKYE 436


>gi|294675532|ref|YP_003576148.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella ruminicola 23]
 gi|294471893|gb|ADE81282.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella ruminicola 23]
          Length = 470

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     +  Y  G+E       + ++ +R L           G    S   E 
Sbjct: 189 CNNFCHYC-----IVPYTRGRERSRD-VESILREVRDLRDKGFKEVTLLGQNVNSYKFED 242

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +   +L  +A+          T  ++P  +     +   +       I L VQS  ++ 
Sbjct: 243 TDFPTLLRRVAEEVPTMRVRFTT--SHPKDMSDETLKVIAEVPNVCKHIHLPVQSGSDRI 300

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +     +  +H  R I P   +S D+      +T    ++ L        D  
Sbjct: 301 LKLMNRKYTREWYMDRVHAIRRIIPDCGLSTDIFVGYHSETEEDHQLSLDLMREVGYDSA 360

Query: 203 SLYQLTIEKGTLFYK 217
            +++ +   GT   K
Sbjct: 361 FMFKYSERPGTYASK 375


>gi|186894491|ref|YP_001871603.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|186697517|gb|ACC88146.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Yersinia
           pseudotuberculosis PB1/+]
          Length = 509

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 192 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGA-TY-- 246

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +    YR     V+ + L VQS  +
Sbjct: 247 DGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSD 306

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D
Sbjct: 307 RILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFD 366

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               +  +   GT    +  +       + + +    ++Q    
Sbjct: 367 TSYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 410


>gi|24372122|ref|NP_716164.1| hypothetical protein SO_0528 [Shewanella oneidensis MR-1]
 gi|24346012|gb|AAN53609.1|AE015500_8 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 295

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 83/241 (34%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD   + +  K  +   +     ++  + +   P     +  G      +    +  
Sbjct: 32  CSFCD--MYTQPQKAFRAQKLDKIEQDILAIARTGMPVPRVFLVDGDAM--SLPFARLEA 87

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I + I  +   V+      +  N ++         R+ G++ + +G +S +++ L  + +
Sbjct: 88  ICELIHCHLPQVTRISSYCLPRNLNNKTPEQLTRLRELGLSLLYVGCESGDDEVLAKIKK 147

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQLT 208
                 ++AA+   R +  + S  ++  L     +        +   +   D+LS   +T
Sbjct: 148 GETFESSLAALQKIRAVGMKSSVMILNGLGGVALSQQHAINSAKLMNAAQPDYLSTLVVT 207

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +  G+       DG   LP     + L+   Q + S   L              S H  N
Sbjct: 208 LPLGSERMDAVFDGQFQLPD---QLGLFQEMQMLLSHLELDQ--------TIFRSDHASN 256

Query: 269 Y 269
           Y
Sbjct: 257 Y 257


>gi|218531460|ref|YP_002422276.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Methylobacterium chloromethanicum CM4]
 gi|218523763|gb|ACK84348.1| RNA modification enzyme, MiaB family [Methylobacterium
           chloromethanicum CM4]
          Length = 462

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              + + + E + + +  G R I+    ++    G    
Sbjct: 173 CDK---FCAFCVVPYTRGAEVSRSVAAVVEEARRLVE-GGVREITLIGQNVNAYHGDGPD 228

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  ++D ++    +      T  ++P+    +    +      +  + L VQS  
Sbjct: 229 GAPATLGQLMDALSAVPGLLRLRYTT--SHPNDFADDLIAAHATNPLVMPYLHLPVQSGS 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H        I   RN  P +  S D I   P +T   +   L+       
Sbjct: 287 DRILHAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETLRLVSDIGF 346

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT   +        + +E +A     L +   + +
Sbjct: 347 SAAFSFKYSPRAGTPAAEREDAVPEAVKTERLAALQDLLDRQRHAYN 393


>gi|229890681|sp|B7KVE0|MIAB_METC4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 446

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 75/227 (33%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              + + + E + + +  G R I+    ++    G    
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRSVAAVVEEARRLVE-GGVREITLIGQNVNAYHGDGPD 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  ++D ++    +      T  ++P+    +    +      +  + L VQS  
Sbjct: 213 GAPATLGQLMDALSAVPGLLRLRYTT--SHPNDFADDLIAAHATNPLVMPYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H        I   RN  P +  S D I   P +T   +   L+       
Sbjct: 271 DRILHAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETLRLVSDIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT   +        + +E +A     L +   + +
Sbjct: 331 SAAFSFKYSPRAGTPAAEREDAVPEAVKTERLAALQDLLDRQRHAYN 377


>gi|158521003|ref|YP_001528873.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158509829|gb|ABW66796.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 600

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 10/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C  KC +CD    V      +    ++ L E+  + +L    ++  +   F G   S ++
Sbjct: 180 CPFKCEFCD--IWVVYGNKPRLKSAENVLAELDTLYRLGWKDAVFMVDDNFIGNK-SRVK 236

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQS 144
            + +  ++     +  V    E   EA+ +  +     +    AG N++ +G+++  +++
Sbjct: 237 KELLPALIKWQKAHNYV---FEFYTEASINMADDAELMRLMSDAGFNQVFVGIETPSKEA 293

Query: 145 LRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   G++ N   +   A+   +     +    I      T   +E ++       +    
Sbjct: 294 LEETGKSQNLKYDLKDAVRAIQQHGMEVMAGFIIGFDSDTEDIFERQIAFIQETGIPKAM 353

Query: 204 LYQLTIEKGTLFYKM 218
           +  L    GT+ Y  
Sbjct: 354 VGLLHALPGTVLYNR 368


>gi|47565175|ref|ZP_00236218.1| radical SAM protein, TIGR01212 family [Bacillus cereus G9241]
 gi|49481616|ref|YP_038793.1| Fe-S oxidoreductase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|118479880|ref|YP_897031.1| Fe-S oxidoreductase [Bacillus thuringiensis str. Al Hakam]
 gi|196033185|ref|ZP_03100598.1| conserved hypothetical protein TIGR01212 [Bacillus cereus W]
 gi|228936062|ref|ZP_04098871.1| hypothetical protein bthur0009_45070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228948501|ref|ZP_04110782.1| hypothetical protein bthur0007_46270 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228988005|ref|ZP_04148109.1| hypothetical protein bthur0001_46700 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229093857|ref|ZP_04224951.1| hypothetical protein bcere0021_45780 [Bacillus cereus Rock3-42]
 gi|301056258|ref|YP_003794469.1| radical SAM protein [Bacillus anthracis CI]
 gi|47557961|gb|EAL16286.1| radical SAM protein, TIGR01212 family [Bacillus cereus G9241]
 gi|49333172|gb|AAT63818.1| conserved hypothetical protein, possible Fe-S oxidoreductase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|118419105|gb|ABK87524.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|195994614|gb|EDX58569.1| conserved hypothetical protein TIGR01212 [Bacillus cereus W]
 gi|228689536|gb|EEL43347.1| hypothetical protein bcere0021_45780 [Bacillus cereus Rock3-42]
 gi|228771722|gb|EEM20184.1| hypothetical protein bthur0001_46700 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228811181|gb|EEM57521.1| hypothetical protein bthur0007_46270 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228823609|gb|EEM69432.1| hypothetical protein bthur0009_45070 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|300378427|gb|ADK07331.1| conserved hypothetical radical SAM protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|110635718|ref|YP_675926.1| MiaB-like tRNA modifying enzyme [Mesorhizobium sp. BNC1]
 gi|110286702|gb|ABG64761.1| MiaB-like tRNA modifying enzyme [Chelativorans sp. BNC1]
          Length = 426

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C +C     +         V     +      ++          +    FG   P 
Sbjct: 150 CDHRCTFC----IIPYGRGNSRSVPMGAVVDQVRRLVENGYAEVVLTGVDLTSFGADLPG 205

Query: 83  LIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   IL  +     +  +   +IEA     + +  +   +    +  + L +Q+
Sbjct: 206 SPRLGKLVRTILAQVPDLKRLRLSSIDSIEA-----DQDLMRALAEEARLMPHLHLSLQA 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H  +++I      R +   + F  D+I   P +T   +E  L+     
Sbjct: 261 GDDMILKRMKRRHLRADSIRFCDEVRRLRTDIVFGADIIAGFPTETEAMFENSLRIVEEC 320

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            + HL ++  +  KGT   +M +
Sbjct: 321 GLTHLHVFPFSPRKGTPASRMPQ 343


>gi|303241628|ref|ZP_07328127.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
           CD2]
 gi|302590848|gb|EFL60597.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
           CD2]
          Length = 438

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   ++  L E++ +  L G + I          S  +  
Sbjct: 153 CSQFCSYC---IIPYARGPIRSRPVEYVLDEVRKLA-LNGYKEIVLTGI--HIASYGKDI 206

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D I K   +     + +    P+++         K         + +QS  + +
Sbjct: 207 KTTSLIDIIKKVHEIDGVERVRLGSIEPTTITHEFVNEIGKLEKVCPHFHISLQSGCDST 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E  ++I L R+    ++   D++   P +T  ++   ++     +   +
Sbjct: 267 LKRMNRRYTTEEYRSSIALLRSGIKDVAVTTDVMVGFPGETDEEFNETVKFLNEISFSAM 326

Query: 203 SLYQLTIEKGTL 214
            +++ +  KGT 
Sbjct: 327 HVFKYSQRKGTP 338


>gi|229087299|ref|ZP_04219441.1| hypothetical protein bcere0022_38700 [Bacillus cereus Rock3-44]
 gi|228696001|gb|EEL48844.1| hypothetical protein bcere0022_38700 [Bacillus cereus Rock3-44]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 62/197 (31%), Gaps = 8/197 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSIFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +      + ++
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHTKWKGGKCIAYFQAYTNT---HAPLEVL 110

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +           V ++I   P  +            K     + LG+Q++ E++   + 
Sbjct: 111 KEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    R+   +I  LP +         +      V  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDLVL 226
            KGT   K ++ G L  
Sbjct: 231 LKGTPMVKQYEKGQLQF 247


>gi|145599895|ref|YP_001163971.1| tRNA-thiotransferase [Yersinia pestis Pestoides F]
 gi|145211591|gb|ABP40998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Yersinia pestis Pestoides
           F]
          Length = 479

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 162 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 219

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 220 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 277

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 278 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 337

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 338 SYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 380


>gi|126463354|ref|YP_001044468.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides ATCC
           17029]
 gi|126105018|gb|ABN77696.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides ATCC
           17029]
          Length = 425

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 21/226 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G    + + +  ++ +R+L   R  + +   G   +     
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIRRLV-DRGFAEVVLTGVDLTSWGAD 198

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN------RISLGVQS 139
                 + D + +   +  ++     ++  S+E +  +    A          + L +Q 
Sbjct: 199 LPAAPRLGDLVMRILRLVPDLARLRISSIDSIEAD--EALMGAIATEPRLMPHLHLSLQH 256

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   +AI     AR + P + F  D+I   P +T   +   L+     
Sbjct: 257 GDDLILKRMKRRHLRDDAIRFCEEARRLRPDIVFGADIIAGFPTETEAAFANSLKLVEEC 316

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +  L ++  +  KGT   +M +           A  L  L ++  
Sbjct: 317 GLTFLHVFPFSPRKGTPAARMPQL--AGPVIRERAAQLRALGEARL 360


>gi|22125098|ref|NP_668521.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pestis KIM 10]
 gi|21957953|gb|AAM84772.1|AE013722_11 hypothetical protein y1195 [Yersinia pestis KIM 10]
          Length = 512

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 195 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 252

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 253 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 310

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 311 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 370

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 371 SYSFIYSPRPGTPAADLPNNVSEEEKKQRLHILQQRISQQAME 413


>gi|18409989|ref|NP_565035.1| radical SAM domain-containing protein / TRAM domain-containing
           protein [Arabidopsis thaliana]
 gi|12322201|gb|AAG51137.1|AC069273_8 unknown protein [Arabidopsis thaliana]
 gi|14194137|gb|AAK56263.1|AF367274_1 At1g72090/F28P5_4 [Arabidopsis thaliana]
 gi|27363418|gb|AAO11628.1| At1g72090/F28P5_4 [Arabidopsis thaliana]
 gi|332197151|gb|AEE35272.1| Methylthiotransferase [Arabidopsis thaliana]
          Length = 601

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ ++   T +    +     S  +  +G        
Sbjct: 207 CLGACTYCK-TKHARGHLGSYTVDSLVERVRTVISEGVKEIWLSSEDTGAYGRDI----- 260

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ----GYRKAGV-NRISLGVQSL 140
             N+ ++L+ I K      +  + I        + + +      R   V   + + VQS 
Sbjct: 261 GVNLPILLNAIVKELPSDQSTMLRIGMTNPPFILEHLKEIAAVLRHPCVYTFLHVPVQSG 320

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R + ASE    +     +    +++ D+I   P +T   +   ++    Y 
Sbjct: 321 SDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQTVELIKDYK 380

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + + Q     GT   KM
Sbjct: 381 FPQVHISQFYPRPGTPAAKM 400


>gi|297626490|ref|YP_003688253.1| 2-methylthioadenine synthetase MiaB protein [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296922255|emb|CBL56827.1| 2-methylthioadenine synthetase MiaB protein [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 504

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 25/228 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +N+          +V     C   C YC             +      L E+Q +
Sbjct: 151 LQTFPSNLPTHRELDYAAWVSISVGCNNTCTYC---IVPALRGKETDRRPGDILAEIQML 207

Query: 63  RQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                     L    +   + FG       +    A +L        +          +P
Sbjct: 208 VDQGVQEITLLGQNVNTYGVEFG-------DRGAFAKLLRACGDITGLERVRF--TSPHP 258

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +  +   +    ++++ + +QS  +  LR + R++ +      +   R   P   
Sbjct: 259 AAFTDDVIEAMAETPNVMHQLHMPLQSGSDHVLRAMRRSYRSERFHGILERVRAAMPDAA 318

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +S D+I   P +T   +E  LQ        +   +Q +I  GT   +M
Sbjct: 319 ISTDIIVGFPGETDEDFEQTLQAVRRSRFTNAYTFQYSIRPGTPAGEM 366


>gi|242238554|ref|YP_002986735.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dickeya dadantii Ech703]
 gi|242130611|gb|ACS84913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dickeya dadantii Ech703]
          Length = 476

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 18/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  + +  G R ++ +      + G   +
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILYEIAQLAEQ-GVREVNLLGQNVNAYRGE--T 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    D +     +     I     +P     +    Y      V+ + L VQS
Sbjct: 213 Y--DGEICSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIGVYEDTPELVSFLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I   R + P +  S D I   P +T   +E  ++     
Sbjct: 271 GSDRVLTMMKRRHTALEYKAIIRKLRKVRPDIQISSDFIVGFPGETQEDFEQTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             D    +  +   GT    M  D       + + +    ++Q          
Sbjct: 331 NFDMSFSFIYSPRPGTPAADMVDDVCEEEKKQRLYILQERISQQAMQYSRRMQ 383


>gi|294788156|ref|ZP_06753399.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Simonsiella muelleri ATCC
           29453]
 gi|294483587|gb|EFG31271.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Simonsiella muelleri ATCC
           29453]
          Length = 441

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAHLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|206969767|ref|ZP_03230721.1| conserved hypothetical protein TIGR01212 [Bacillus cereus AH1134]
 gi|206735455|gb|EDZ52623.1| conserved hypothetical protein TIGR01212 [Bacillus cereus AH1134]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    ++   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|67459670|ref|YP_247294.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia felis
           URRWXCal2]
 gi|75535934|sp|Q4UK06|MIAB_RICFE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|67005203|gb|AAY62129.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia felis
           URRWXCal2]
          Length = 445

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 76/226 (33%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C K C +C   +       +  ++ + ++        +++T      + + G G      
Sbjct: 162 CDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEITLLGQNVNAYHGKG-----P 216

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I  + D +     + +   +  + ++P  +  +  + +      +  + L VQS   
Sbjct: 217 DDKIFTLADLLGHLAQIPNLERLRYMTSHPIDMTDDLIKLHGTEPKLMPFLHLPVQSGSN 276

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R H+       I+  R   P +  S D I   P +T   +E  L         
Sbjct: 277 KILKAMNRKHDRDYYFDIINRLRETRPDIVLSSDFIVGFPGETDEDFEDTLDLVRRVKYG 336

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
               ++ +   GT            + SE + +    LT    + +
Sbjct: 337 QCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQQELTAQQLAFN 382


>gi|320355317|ref|YP_004196656.1| MiaB-like tRNA modifying enzyme [Desulfobulbus propionicus DSM
           2032]
 gi|320123819|gb|ADW19365.1| MiaB-like tRNA modifying enzyme [Desulfobulbus propionicus DSM
           2032]
          Length = 444

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR----QLTGPRSISSIFFGGGTPSL 83
           C   C YC     +  Y  G+   +      +        Q      I+ I  G     L
Sbjct: 153 CDNFCSYC-----IVPYTRGRSRSLP-LTKILAQTAVFVDQGYRELVITGINVGKYGLDL 206

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E + I  +L  + +++        +IE  P+ V          +   +  + + +QS +
Sbjct: 207 DEGETIYSLLARLCRDFPGLRLRLSSIE--PTEVNDQLLDLMSGSPNFMPHLHIPLQSGD 264

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +Q L  + R +  +E  A I       P   +  D++   P +T  + +   +      V
Sbjct: 265 DQVLARMNRRYTRAEFAAVIERVHQALPLATIGCDVLGGFPGETEAEADNTYRLLTDLPV 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
            +L ++  +   GTL   + + 
Sbjct: 325 HYLHVFPYSRRPGTLAASLPQQ 346


>gi|225388623|ref|ZP_03758347.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme
           DSM 15981]
 gi|225045299|gb|EEG55545.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme
           DSM 15981]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 78/244 (31%), Gaps = 36/244 (14%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGP 68
           C  +        C +C      DF     +        I++    ++         +  P
Sbjct: 34  CPNRDGTLGNRGCIFCSSGGSGDF---AAQACPDVWEQIEAAKARVRRKMPPESSAMAPP 90

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
                 +F   T +      +  + +    +  V+    +++   P  +           
Sbjct: 91  SPSYIAYFQSYTGTYAPLPRLRSLFERAVSHPDVAL---LSVATRPDCLPDETVSLLA-- 145

Query: 129 GVNR-----ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183
           G+NR     + LG+Q++ E + RF+ R +       A    +     +   +I  LP + 
Sbjct: 146 GLNRRKPVWVELGLQTVHEDTARFIRRGYGFPVFEDACRRLKAAGITVVVHVILGLPGED 205

Query: 184 MTQWEMELQRALSYA----VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             +    + R   ++    +D + L  L + KGT     +++    + S    +D     
Sbjct: 206 RERMLETITRMADFSRAGLIDGIKLQLLHVLKGTDLADYYQNHPFPIFSMEEYIDFVIDC 265

Query: 240 QSIT 243
             + 
Sbjct: 266 AELL 269


>gi|91775006|ref|YP_544762.1| tRNA-i(6)A37 modification enzyme MiaB [Methylobacillus flagellatus
           KT]
 gi|122985599|sp|Q1H3L6|MIAB_METFK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91708993|gb|ABE48921.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacillus
           flagellatus KT]
          Length = 442

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R       F       +Q   Q     ++      G      + +
Sbjct: 159 CSKYCTFC--VVPYTRGDEVSRPFDDILTEAIQLAEQGVKEITLLGQNVNGYRSETADGE 216

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++AL+++ +A+   +      T  ++P+ +       Y +    V+ + L VQ+  ++
Sbjct: 217 MADLALLIEYLAEIPEIERIRYTT--SHPNEMTPALIDCYARIPKLVSHLHLPVQAGSDR 274

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + RN+   +  + I   R   P +    D I   P +T   +E  ++       D 
Sbjct: 275 VLMNMKRNYTVLQYKSIIRKLRAARPDICISSDFIVGFPGETEQDFEATMKLMRDVGFDF 334

Query: 202 LSLYQLTIEKGTLFYKMHKDG 222
              +  +   GT    +  D 
Sbjct: 335 SFSFIYSPRPGTPASYLPDDC 355


>gi|194336678|ref|YP_002018472.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309155|gb|ACF43855.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 469

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 82/240 (34%), Gaps = 21/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  +   L EM++ ++  G ++++  F          P+
Sbjct: 207 CPVGCNFCTTPTIYGKNYRYRE--LDLVLDEMRYHQERVGKKNVNFSFMDDNI--SFRPK 262

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +AK       V      + + ++         ++G + +S+G +SL  ++L+
Sbjct: 263 YFMTLLEEMAKL-----GVHWNANISMNFLDKPEVAELAGRSGCDLLSIGFESLNPETLK 317

Query: 147 FL----GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            L     R  N  +    +         +    ++     T   +++     +   ++  
Sbjct: 318 TLHKGSNRLSNYEQV---VSNLHKNKIAIQGYFMFGFDNDTEESFQLTYDFIMKNKIEFP 374

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
               +T   GT ++   K        +      Y    +  +   +    +SN   L  E
Sbjct: 375 VFSLVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPTNMTGEKM----LSNFVKLQKE 430


>gi|228910600|ref|ZP_04074412.1| hypothetical protein bthur0013_47450 [Bacillus thuringiensis IBL
           200]
 gi|228849015|gb|EEM93857.1| hypothetical protein bthur0013_47450 [Bacillus thuringiensis IBL
           200]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLANLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    ++   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|229158362|ref|ZP_04286427.1| hypothetical protein bcere0010_45390 [Bacillus cereus ATCC 4342]
 gi|229175467|ref|ZP_04302978.1| hypothetical protein bcere0006_45460 [Bacillus cereus MM3]
 gi|228607999|gb|EEK65310.1| hypothetical protein bcere0006_45460 [Bacillus cereus MM3]
 gi|228625109|gb|EEK81871.1| hypothetical protein bcere0010_45390 [Bacillus cereus ATCC 4342]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|226320508|ref|ZP_03796074.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 29805]
 gi|226234150|gb|EEH32865.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 29805]
          Length = 178

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 3/115 (2%)

Query: 236 YNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAI 295
           +        ++G   YEI+N +  G ES HN   W    ++G+G  A S +         
Sbjct: 6   WFCALECLESNGYINYEITNFALKGHESRHNKLNWELKPHLGLGLYAVSLLFCNDKNN-- 63

Query: 296 SIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLA 350
           ++          V+ N H V   E L   +      + GL   +G+S++   +  
Sbjct: 64  NVRALIRKTGSFVKANNHLVT-LELLEDLEFFVYHFIQGLGTIQGVSLRALRLRF 117


>gi|30022819|ref|NP_834450.1| Fe-S oxidoreductase [Bacillus cereus ATCC 14579]
 gi|229130028|ref|ZP_04258992.1| hypothetical protein bcere0015_44680 [Bacillus cereus BDRD-Cer4]
 gi|296505216|ref|YP_003666916.1| Fe-S oxidoreductase [Bacillus thuringiensis BMB171]
 gi|29898378|gb|AAP11651.1| Fe-S oxidoreductase [Bacillus cereus ATCC 14579]
 gi|228653472|gb|EEL09346.1| hypothetical protein bcere0015_44680 [Bacillus cereus BDRD-Cer4]
 gi|296326268|gb|ADH09196.1| Fe-S oxidoreductase [Bacillus thuringiensis BMB171]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    ++   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|331090885|ref|ZP_08339729.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 2_1_46FAA]
 gi|330405531|gb|EGG85062.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 2_1_46FAA]
          Length = 440

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S      + + E   +  + E+  + Q T   ++      G 
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMERLLKEAEGLAEQGVKELILVAQET---TLYGKDIYG- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  +++  +L  + K   +       +   P  +     Q  ++     + + L +
Sbjct: 210 ------EKSLHKLLKELCKVSGIQWIR--ILYCYPEEITDELIQVMKEEKKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR  + ++    I   R   P ++    LI   P +T  Q E  ++   
Sbjct: 262 QHASDEILKRMGRRTSKAQLKEIIGKLREEIPDITLRTTLITGFPGETKEQHEELMEFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L ++  + E+ T    +  +       E+   +L  L Q I
Sbjct: 322 EMEFDRLGVFTYSPEEDTP-AALMDNQIEEEVKEDRQAELMELQQDI 367


>gi|322807272|emb|CBZ04846.1| miab family protein, possibly involved in tRNA or rRNAmodification
           [Clostridium botulinum H04402 065]
          Length = 432

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTP 81
           C + C YC   F       K  +          M+ +++L+        +S I       
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPE--------KIMEEVKKLSKHGFKEIILSGIDIASYGF 203

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQ 138
            L    N+  IL+ I K   +      +I  +P+             ++       L +Q
Sbjct: 204 DLEGKYNLTSILEEIDKVEGIERIRIGSI--DPTFFTEEEIIRISKLKRF-CPHFHLSLQ 260

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   ++L+ + R +   +    +H  R     +S   D+I   P++T  ++    +    
Sbjct: 261 SGCNETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPRETEEEFNKTYEFLRD 320

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +  + +++ +  KGT   +M    D
Sbjct: 321 IKLSKMHVFKFSPRKGTRAEEMKNQVD 347


>gi|229895960|ref|ZP_04511130.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           Pestoides A]
 gi|229891217|sp|A9R6X8|MIAB_YERPG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891219|sp|A4TNY6|MIAB_YERPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229700883|gb|EEO88912.1| isopentenyl-adenosine A37 tRNA methylthiolase [Yersinia pestis
           Pestoides A]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 215 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 333 SYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 375


>gi|222087519|ref|YP_002546056.1| hypothetical protein Arad_4404 [Agrobacterium radiobacter K84]
 gi|221724967|gb|ACM28123.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 424

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 91/233 (39%), Gaps = 27/233 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGG---GT 80
           C  +C +C            +   + + +++ + + +          + +  +GG   G 
Sbjct: 147 CDHRCTFC---IIPYGRGNSRSVPMGAVVSQARNLVESGYREIVLTGVDATSYGGDLPGE 203

Query: 81  PSL-IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P+L +  + +   +  I +   +SS   I  +A+   +  +  +         + L +Q 
Sbjct: 204 PTLGLLAKTLLKQIPEIRRL-RLSSIDSIEADAHLLDLIADEPRFM-----PHLHLSLQH 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H+ ++AI  I   R + P MSF  D+I   P +T   +E  +  A   
Sbjct: 258 GDDMILKRMKRRHSRADAIRFIEDVRRLRPEMSFGADMIAGFPTETGAMFENAVSLAEEA 317

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           A+ HL ++  +   GT   +M        P  + A+      +   +   LH 
Sbjct: 318 AIAHLHVFPYSPRPGTPAARM--------PQLDRALIKERAARLRAAGQRLHQ 362


>gi|306831999|ref|ZP_07465154.1| radical SAM protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304425925|gb|EFM29042.1| radical SAM protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 313

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  +++ + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYIAELSDRMHVTVELGLQTTYDETSKII 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H     +  +   R + P++     LI  LP +T       ++R +    +D + L+
Sbjct: 160 NRAHTYDLYVETVKRLRQLAPKVEIVSHLINGLPGETHDMMIENVRRCVTDNEIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L      V++      I   + +  
Sbjct: 220 LLHLMTSTKMQRDYHEGRLKLLGMEEYVNIICDQLEIIPKNIIIH 264


>gi|294085380|ref|YP_003552140.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664955|gb|ADE40056.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 439

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 60/201 (29%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G           +   + L    +   +  G    S     
Sbjct: 165 CDHRCTFC-----IIPYGRGNNRSAG-LHQIIDAAQALVDGGACEIVLTGVDITSWGSDL 218

Query: 88  N----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  + +       + ++   +P+  +             +    +  Q  +
Sbjct: 219 AGRPRLGRLVRALLREIPALPRLRLS-SIDPAEGDAELMAVLGDDDRLMPHFHISAQHGD 277

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   + I     AR   P + F  D+I   P +     +   +      +
Sbjct: 278 DLILKRMKRRHLGRDIIRFCDEARRRRPDIVFGADMIAGFPTEDDAAHQASCEMIARAGI 337

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +   GT    M  
Sbjct: 338 THLHVFPYSPRPGTPAALMPP 358


>gi|162421780|ref|YP_001606317.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis Angola]
 gi|162354595|gb|ABX88543.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Yersinia pestis Angola]
          Length = 482

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 165 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 222

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 223 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 280

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 281 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 340

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 341 SYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 383


>gi|218780059|ref|YP_002431377.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218761443|gb|ACL03909.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 477

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 65/189 (34%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   +H       +    +S + E++  R+  G   I   F  G T +     
Sbjct: 215 CCHRCVFC--PAHKVSGAGVRLRSPESIVREIRECREHWG---IQDFFMRGETFTASRAW 269

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D   +    +  V     A   ++++      + AG+  +S+G +S    +L  
Sbjct: 270 ----LKDLCRELKKQAPGVRWLCNARADAMDLELAGLMKSAGLCGVSMGAESPNADTLAL 325

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + ++    +   A++  R+         +     +T       +++A +   D    +  
Sbjct: 326 IKKDLCFEDVRKAVNACRSHGIMTMVYFLMGFLWETREDIIRNIEKAGTLKSDVTEFFFP 385

Query: 208 TIEKGTLFY 216
               G   Y
Sbjct: 386 YPLPGAELY 394


>gi|42526138|ref|NP_971236.1| radical SAM domain-containing protein [Treponema denticola ATCC
           35405]
 gi|41816250|gb|AAS11117.1| radical SAM domain protein [Treponema denticola ATCC 35405]
          Length = 311

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 13/218 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C+   +++   +     +     E+  ++ L G   +S IF G G+   +E +++ 
Sbjct: 29  KCKFCNLFRNIKYRDLS----LSEIEEELIRVKNLNGN--LSKIFLGDGSAFNLETEHLL 82

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IL+ I K         I ++A  + +        +     G+  + +GV+S  +  L F
Sbjct: 83  KILNLIHKY--FPDCNCINMDATITGILKKTDAELETLYTQGIRTLYIGVESGLDDVLLF 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLY 205
           + ++H  +EA  A+   +         ++  +    +++   E   +         +  +
Sbjct: 141 MNKDHTRAEAERAVSKIQKHGYSFGAHIMTGIAGKGRSIANAEATAEFLNKTKPIRVINF 200

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            + + K    YK  K G     SE   +        + 
Sbjct: 201 SMFLHKEVPLYKDIKAGKYEAASEMENLKEEKRLLELL 238


>gi|88801432|ref|ZP_01116960.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaribacter irgensii
           23-P]
 gi|88782090|gb|EAR13267.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaribacter irgensii
           23-P]
          Length = 484

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 73/234 (31%), Gaps = 25/234 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    +S L E+Q M         L G    S ++FGGG 
Sbjct: 181 CDNMCTFC---VVPFTRGRERSRDPKSILEEIQSMVDQNFKEITLLGQNVDSFLWFGGGL 237

Query: 81  ------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  + +        A +LD  A              +NP  + ++      K    
Sbjct: 238 KKDFKKATEMARATAIGFAELLDMCA--TKFPKTRFRFSTSNPQDMSLDVIHVMAKHINI 295

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
              + L VQS     L+ + R H   E +  +     I P MS   D+I     +T    
Sbjct: 296 CKYLHLPVQSGSNAMLKAMNRQHTREEYMTLVDNIFKIIPEMSLSQDMIVGFCGETEEDH 355

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +  L        D   ++  +   GTL      D       +    ++ +L Q 
Sbjct: 356 QDTLALMQYVKYDFGFMFTYSERPGTLAGNKMDDDVPQPVKKRRLQEIIDLQQE 409


>gi|302522287|ref|ZP_07274629.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. SPB78]
 gi|302431182|gb|EFL02998.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp. SPB78]
          Length = 506

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 141 ESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 198

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 199 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGGIEGLERVRF--TSPHPRDFTDD 256

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     +  I   R   P   +S D+I
Sbjct: 257 VIAAMAETPNVMPQLHMPLQSGSDSVLRAMRRSYRQDRYLGIIEKVRAAIPDAAISTDII 316

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 317 VGFPGETEEDFEQTLHVVREARFAAAFTFQYSKRPGTPAAEM 358


>gi|167039222|ref|YP_001662207.1| biotin synthase [Thermoanaerobacter sp. X514]
 gi|300915529|ref|ZP_07132840.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307723803|ref|YP_003903554.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166853462|gb|ABY91871.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|300888427|gb|EFK83578.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307580864|gb|ADN54263.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
          Length = 345

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++  E        ++    +        ++    G     
Sbjct: 60  CKQNCLYCGLRRDNKNIKRYRLKPE--------QIINFAKNARNLGYRTVVLQSGEDDFF 111

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I +        +I I  +        ++ Y++AG +R  L +++ +++ 
Sbjct: 112 NVERMTKIIKSIKQL-------DIAITLSIGEKTREEYKAYKEAGADRYLLRIETTDKEL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L  N +       +   + +   +    +  LP QT+     ++        D + +
Sbjct: 165 YEKLDPNMSHENRKRCLKDLKELGYEVGTGCLIGLPGQTIESIADDILFFKEIDADMIGV 224

Query: 205 YQLTIEKGTLFYK 217
                   T    
Sbjct: 225 GPFIPNPDTPLKN 237


>gi|94968239|ref|YP_590287.1| MiaB-like tRNA modifying enzyme [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550289|gb|ABF40213.1| MiaB-like tRNA modifying enzyme [Candidatus Koribacter versatilis
           Ellin345]
          Length = 495

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 65/229 (28%), Gaps = 30/229 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C               +++     +     L     + S+   G    ++   
Sbjct: 208 CNNRCSFC------------VIPYVRGKSRSLTMDSVL---HEVDSLVEAGYKEIVLSGI 252

Query: 88  NIALILDGIAKNWTVSSNVEITIE-----------ANPSSVEVNNFQGYRKAG--VNRIS 134
           N+    + +         V   +E             P            ++        
Sbjct: 253 NLGRWGNDLRPRVRFEELVRNIVENTAIPKVRISSVEPMDWSNELIALVAESPKICKHAH 312

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQ 192
             +QS  ++ LR + R +        +   R   P+  +  D++   P +T   +E    
Sbjct: 313 APLQSGSDRILRKMHRRYRPWHYADRLERIRTAMPQAAIGADVMVGFPGETDEHFEETRS 372

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              S    +L ++  +   GT    M +   + +  E   V    + + 
Sbjct: 373 FIESLPFTYLHVFTYSSRPGTPSAAMAEQVPVYVARERNKVLRDLIAEK 421


>gi|72161215|ref|YP_288872.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Thermobifida
           fusca YX]
 gi|123774758|sp|Q47RR8|MIAB_THEFY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71914947|gb|AAZ54849.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermobifida fusca YX]
          Length = 494

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 14/218 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C            ++      L E++ +  +     ++             + 
Sbjct: 158 CNNTCTFC---IVPALRGKEKDRRPGDILAEIRAVVAEGAIEVTLLGQNVNAYGSEFGDR 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q  + +L    +   +          +P     +      +    + ++ + +QS  ++ 
Sbjct: 215 QAFSKLLRACGEIEGLERVRF--TSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDRI 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R++ A   +  +   R   P   ++ D+I   P +T   +   L+        H 
Sbjct: 273 LRAMRRSYRAERFLRIVEKVREAIPDAAITTDVIVGFPGETEEDFAETLRVMEEVRFAHA 332

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
             +Q +   GT    M    D  +P E V      L +
Sbjct: 333 FTFQYSKRPGTPAASM----DNQVPREVVKERYQRLLE 366


>gi|330995923|ref|ZP_08319818.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT
           11841]
 gi|329574262|gb|EGG55837.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT
           11841]
          Length = 447

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G R I       G       +
Sbjct: 168 CDYYCTYC---TIPYARGRSRNGSIASLVRQAEQAAS-EGGREIVLTGVNIGDFGKTTGE 223

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
           +   ++  + +   ++     +IE  P+ +  +      +  A +    + +QS  ++ L
Sbjct: 224 SFLDLVKALDRVEGIARYRISSIE--PNLLTEDVLAFCAESRAFMPHFHIPLQSGSDEVL 281

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +     I   + + P   +  D+I     +T   +E       S  V  L 
Sbjct: 282 KLMRRRYTTNFFAEKISRVKELMPDAFIGVDVIVGTRGETDGCFEEAFGFIRSLDVSQLH 341

Query: 204 LYQLTIEKGTL 214
           ++  +   GT+
Sbjct: 342 VFSYSERPGTM 352


>gi|206977284|ref|ZP_03238181.1| conserved hypothetical protein TIGR01212 [Bacillus cereus H3081.97]
 gi|217962238|ref|YP_002340808.1| conserved hypothetical protein TIGR01212 [Bacillus cereus AH187]
 gi|229141486|ref|ZP_04270022.1| hypothetical protein bcere0013_45800 [Bacillus cereus BDRD-ST26]
 gi|206744435|gb|EDZ55845.1| conserved hypothetical protein TIGR01212 [Bacillus cereus H3081.97]
 gi|217066333|gb|ACJ80583.1| conserved hypothetical protein TIGR01212 [Bacillus cereus AH187]
 gi|228641971|gb|EEK98266.1| hypothetical protein bcere0013_45800 [Bacillus cereus BDRD-ST26]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|126459352|ref|YP_001055630.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126249073|gb|ABO08164.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 359

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 78/239 (32%), Gaps = 18/239 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV KCP C F     R     + +++        +RQ    R ++ +   GG    + P+
Sbjct: 62  CVAKCPICAFY----RLPGSPDAYVRKPEEVAAAVRQAVEQRGVTELHINGGFNPFLTPE 117

Query: 88  NIALILDGIAKNWTV-----SSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQSLE 141
               +   + K          +  E+   A    +        ++ AG++ IS G   + 
Sbjct: 118 YFDQLFSAVKKAAPRVVIKGPTMAEVDYYAKLWHMSWREVLSRWKDAGLDAISGGGAEIF 177

Query: 142 EQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + +R +   H  +  E I    +A  +    +  ++Y   ++     +  + R      
Sbjct: 178 AEEVRRVVAPHKISGEEWIRIAEVAHELGIPSNATMLYGHVEEDRHVVDH-IFRVKELQE 236

Query: 200 DHLSLYQLTIEK----GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               +      K     T  YK          + +V V   +    +     + AY +S
Sbjct: 237 KTGRVLLFIPVKYNPQNTELYKRGVVKGPAPATYDVKVVAISRLI-LLDRLKVAAYWLS 294


>gi|226330999|ref|ZP_03806517.1| hypothetical protein PROPEN_04929 [Proteus penneri ATCC 35198]
 gi|225201794|gb|EEG84148.1| hypothetical protein PROPEN_04929 [Proteus penneri ATCC 35198]
          Length = 476

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 69/226 (30%), Gaps = 18/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCSFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGATF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + I     +     I     +P     +    Y      V+ + L VQS
Sbjct: 214 ---DGQICSFAELIRLVAAIDGIDRIRFTTSHPIEFTDDIVAVYEDTPELVSYLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + RNH A E  + I   R   P +  S D I   P +T   +E  +Q     
Sbjct: 271 GSDRILTLMKRNHTALEYKSIIRKLRKARPDILISSDFIIGFPGETQDDFEKTMQLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             D    +  +   GT    +  D       + + +    + Q   
Sbjct: 331 NFDMSFSFIYSARPGTPAADLPDDVSEDEKKQRLYLLQQRINQQAM 376


>gi|170025226|ref|YP_001721731.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|169751760|gb|ACA69278.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Yersinia
           pseudotuberculosis YPIII]
          Length = 509

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 69/224 (30%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G  +   
Sbjct: 192 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGA-TY-- 246

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +I    + +     +     I     +P     +    YR     V+ + L VQS  +
Sbjct: 247 DGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSD 306

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D
Sbjct: 307 RILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFD 366

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               +  +   GT    +  +       + + +    ++Q    
Sbjct: 367 TSYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 410


>gi|154251867|ref|YP_001412691.1| MiaB-like tRNA modifying enzyme [Parvibaculum lavamentivorans DS-1]
 gi|154155817|gb|ABS63034.1| MiaB-like tRNA modifying enzyme [Parvibaculum lavamentivorans DS-1]
          Length = 420

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    + +    +  +R L G          +    +GG  
Sbjct: 146 CDHRCTFC-----IIPYGRGPSRSVPA-GEVVNQVRTLVGNGYREVVLTGVDMTSYGGDL 199

Query: 81  PSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P      N+   IL  + +   +  +   +IEA     +    +   +    +  + L +
Sbjct: 200 PGRPSLGNLARRILKLVPELERLRLSSIDSIEA-----DDELMRLIAEEERLMPHLHLSL 254

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS ++  L+ + R H   ++I      R   P +    D I   P +T   +E  ++   
Sbjct: 255 QSGDDMILKRMKRRHLREDSIRFCEDVRKARPDIIFGADFIAGFPTETDEMFENTMRLVD 314

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              +  L ++  +   GT   KM +
Sbjct: 315 ECGLTWLHVFPFSPRPGTPAAKMPQ 339


>gi|91203728|emb|CAJ71381.1| hypothetical protein kustc0636 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 484

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 79/197 (40%), Gaps = 9/197 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-----QSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC   S+    KV    ++      + + E++ +      R    +       +
Sbjct: 201 CPFQCTYC---SNHALRKVASGAYVRLRSPDNVIDEIKEITAFDPTRKDIYLEVETMGVN 257

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                 +   L+G+  + +   N  + +    ++   N F  ++K+    +++G++S  E
Sbjct: 258 RKWDMELCAKLEGLNASLSHPLNFGVNLRVTSNADIENLFVVFKKSNFKFVNIGLESGSE 317

Query: 143 QSLR-FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +  R  L RN++  + I A+ LAR    +++F  +  +P +T+  +   ++       D 
Sbjct: 318 RVRREILKRNYSNEDIIKAVTLARKYGLKVNFYNLMGIPGETVADFNETIRMNRICQPDT 377

Query: 202 LSLYQLTIEKGTLFYKM 218
             L       GT  Y +
Sbjct: 378 QMLSIFYPYPGTDLYAL 394


>gi|134300331|ref|YP_001113827.1| RNA modification protein [Desulfotomaculum reducens MI-1]
 gi|134053031|gb|ABO51002.1| RNA modification enzyme, MiaB family [Desulfotomaculum reducens
           MI-1]
          Length = 436

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 78/199 (39%), Gaps = 15/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFG--GGTPSL 83
           C   C YC     +   +    + +      +  + ++Q      ++ I  G  G   + 
Sbjct: 154 CNSFCAYC----IIPYARGPVRSRLPENVLSSAEELIQQGFQEIVLTGIHIGAYGQDFTG 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  ++  +++ +AK   ++     ++E  P  +     +   +       + + +QS +
Sbjct: 210 -KDIDLGWLVERLAKLPGLTRLRLGSVE--PHDINNALIKAVSEHPNVCRHLHIPLQSGD 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  +GR +N  +    IH    I P ++   D+I   P +T   ++  L+       
Sbjct: 267 DEILALMGRRYNTQQFTDLIHKINQIMPGIAITSDIIVGFPGETQEHFQNTLKTVERSGF 326

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             + +++ +  KGT   +M
Sbjct: 327 AGIHVFKYSPRKGTPAAEM 345


>gi|332678361|gb|AEE87490.1| tRNA-i(6)A37 methylthiotransferase [Francisella cf. novicida Fx1]
          Length = 442

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 210 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 267

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 268 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 327

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 328 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 357


>gi|153853286|ref|ZP_01994695.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814]
 gi|149754072|gb|EDM64003.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814]
          Length = 440

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 19/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C K C YC     + +    + N+    +  +    Q    + +  +       +     
Sbjct: 154 CDKHCTYC----IIPK---VRGNYRSVPMERLIKEAQELADQGVKELILVAQETTVYGQD 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +   +++  +L  + +   +       +   P  ++ N  Q  ++     + + L +Q  
Sbjct: 207 IYGEKSLHKLLKELCQIKGIRWIR--LLYCYPEEIDDNLIQVMKEEPKICHYLDLPIQHA 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR  +  + I  I   R   P ++    LI   P +T  Q E  ++      
Sbjct: 265 SDAILKRMGRRTSKQQLIDTITKLRKEIPDIALRTTLITGFPGETQEQHEEVMEFVDEME 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            + L ++  + E+ T    M    D     E+   D+  L Q I
Sbjct: 325 FERLGVFTYSPEEDTPAATMPDQID-EEVKEDRQADIMELQQEI 367


>gi|317050742|ref|YP_004111858.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfurispirillum
           indicum S5]
 gi|316945826|gb|ADU65302.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfurispirillum
           indicum S5]
          Length = 441

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 67/211 (31%), Gaps = 13/211 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +S  + +  +RQL           G    S     
Sbjct: 155 CDNYCSYC-----IVPYTRGRERS-RSAPSILAEIRQLVDDGVREVTLLGQNVNSYRWQD 208

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEE 142
               ++D       V    E+     + ++P        +      V   + L +Q+   
Sbjct: 209 KAGALVDFPQLLHLVHDIPELQRIRFVTSHPKDFSEAMMEAMALPRVCKYLHLPIQAGSN 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E +A I   +   P +  S D +   P +T   +   +         
Sbjct: 269 RILKLMNRGYTREEYLAKIARLKERIPGVALSSDFLVGFPGETEEDFLQTMDILEQVEYK 328

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            +  +  ++   T    M       + +E +
Sbjct: 329 QIFGFNYSVRPETKAATMADQVPFEVMNERL 359


>gi|221640408|ref|YP_002526670.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides KD131]
 gi|221161189|gb|ACM02169.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides KD131]
          Length = 425

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 78/228 (34%), Gaps = 25/228 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  ++ +R+L        +  G    S    +
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIRRLVDRGFAEVVLTGVDLTSWGADL 199

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  IL  +     +  +   +IEA     +             +  + L +
Sbjct: 200 PAAPRLGDLVMRILRLVPDLARLRISSIDSIEA-----DEALMGALATEPRLMPHLHLSL 254

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P + F  D+I   P +T   +   L+   
Sbjct: 255 QHGDDLILKRMKRRHLRDDAIRFCEEARRLRPDIVFGADIIAGFPTETEAAFANSLKLVE 314

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              +  L ++  +  +GT   +M +           A  L  L ++  
Sbjct: 315 ECGLTFLHVFPFSPRQGTPAARMPQL--AGPVIRERAAQLRTLGEARL 360


>gi|167909625|ref|ZP_02496716.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           112]
          Length = 457

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGAIAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSAEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
           + D    +  +   GT    +
Sbjct: 331 SYDTSFSFIYSPRPGTPAANL 351


>gi|167822821|ref|ZP_02454292.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           9]
 gi|226196667|ref|ZP_03792247.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           Pakistan 9]
 gi|225931198|gb|EEH27205.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           Pakistan 9]
          Length = 457

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGAIAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSAEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
           + D    +  +   GT    +
Sbjct: 331 SYDTSFSFIYSPRPGTPAANL 351


>gi|167718182|ref|ZP_02401418.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           DM98]
          Length = 457

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGAIAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSAEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
           + D    +  +   GT    +
Sbjct: 331 SYDTSFSFIYSPRPGTPAANL 351


>gi|45440923|ref|NP_992462.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Yersinia
           pestis biovar Microtus str. 91001]
 gi|45435782|gb|AAS61339.1| putative tRNA-thiotransferase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 512

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 195 CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 252

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 253 ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 310

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 311 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 370

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 371 SYSFIYSPRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAME 413


>gi|53718317|ref|YP_107303.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           pseudomallei K96243]
 gi|53724681|ref|YP_102060.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           mallei ATCC 23344]
 gi|121600987|ref|YP_994016.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei
           SAVP1]
 gi|124383869|ref|YP_001028320.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei NCTC
           10229]
 gi|126439490|ref|YP_001057762.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           668]
 gi|126448080|ref|YP_001081964.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei NCTC
           10247]
 gi|126453332|ref|YP_001065006.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1106a]
 gi|134279698|ref|ZP_01766410.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           305]
 gi|167737215|ref|ZP_02409989.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           14]
 gi|167814345|ref|ZP_02446025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           91]
 gi|167844396|ref|ZP_02469904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           B7210]
 gi|167892910|ref|ZP_02480312.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           7894]
 gi|167901395|ref|ZP_02488600.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917639|ref|ZP_02504730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           BCC215]
 gi|217419549|ref|ZP_03451055.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           576]
 gi|237810913|ref|YP_002895364.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           MSHR346]
 gi|238562538|ref|ZP_00440245.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei GB8
           horse 4]
 gi|242314327|ref|ZP_04813343.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1106b]
 gi|254177145|ref|ZP_04883802.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei ATCC
           10399]
 gi|254181739|ref|ZP_04888336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1655]
 gi|254187671|ref|ZP_04894183.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196370|ref|ZP_04902794.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           S13]
 gi|254203744|ref|ZP_04910104.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei FMH]
 gi|254208720|ref|ZP_04915068.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei JHU]
 gi|254296218|ref|ZP_04963675.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           406e]
 gi|254360228|ref|ZP_04976498.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei
           2002721280]
 gi|81380370|sp|Q63X63|MIAB_BURPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81605634|sp|Q62MK8|MIAB_BURMA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890460|sp|A3MNX8|MIAB_BURM7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890461|sp|A2S8Q1|MIAB_BURM9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890462|sp|A1V713|MIAB_BURMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890463|sp|A3NRN5|MIAB_BURP0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890464|sp|A3N5Z1|MIAB_BURP6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|52208731|emb|CAH34667.1| putative tRNA thiotransferase protein MiaB [Burkholderia
           pseudomallei K96243]
 gi|52428104|gb|AAU48697.1| tRNA-i(6)A37 modification enzyme MiaB [Burkholderia mallei ATCC
           23344]
 gi|121229797|gb|ABM52315.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei
           SAVP1]
 gi|124291889|gb|ABN01158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei NCTC
           10229]
 gi|126218983|gb|ABN82489.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           668]
 gi|126226974|gb|ABN90514.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1106a]
 gi|126240950|gb|ABO04043.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei NCTC
           10247]
 gi|134248898|gb|EBA48980.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           305]
 gi|147745256|gb|EDK52336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei FMH]
 gi|147750596|gb|EDK57665.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei JHU]
 gi|148029468|gb|EDK87373.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei
           2002721280]
 gi|157806026|gb|EDO83196.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           406e]
 gi|157935351|gb|EDO91021.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160698186|gb|EDP88156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei ATCC
           10399]
 gi|169653113|gb|EDS85806.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           S13]
 gi|184212277|gb|EDU09320.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1655]
 gi|217396853|gb|EEC36869.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           576]
 gi|237505165|gb|ACQ97483.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           MSHR346]
 gi|238522408|gb|EEP85852.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Burkholderia mallei GB8
           horse 4]
 gi|242137566|gb|EES23968.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1106b]
          Length = 457

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGAIAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSAEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
           + D    +  +   GT    +
Sbjct: 331 SYDTSFSFIYSPRPGTPAANL 351


>gi|303236111|ref|ZP_07322713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella disiens
           FB035-09AN]
 gi|302483693|gb|EFL46686.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella disiens
           FB035-09AN]
          Length = 443

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 19/202 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-------GGGT 80
           C   C YC     +  +  G+E       + ++ ++ L   R    +          G  
Sbjct: 155 CNNFCHYC-----IVPFTRGRERSRD-VESILREVKDLH-DRGFKEVTLLGQNVNSYGLL 207

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGV 137
           P+   P+N     + + K      ++ +     NP  +  +      +     N I    
Sbjct: 208 PNGKRPENGTSFAELLRKVAQSVPDMRVRFSTSNPEDMTEDILHAVAEEPNLCNHIHFPA 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS   + L+ + R +   + +  +   R I P      D+      +T+   E+ L    
Sbjct: 268 QSGSNKVLKDMNRKYTREDYLEKVAAIRRIIPNCGLTTDIFVGYHDETLEDQELTLSLVR 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYK 217
               D   +++ +   GT   K
Sbjct: 328 ECQFDSAFMFKYSERPGTYAAK 349


>gi|255523434|ref|ZP_05390403.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296184716|ref|ZP_06853127.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255512892|gb|EET89163.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296050498|gb|EFG89921.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 346

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++ ++  I         + +        +I    G     
Sbjct: 63  CKRNCLYCGLRSSNKNIKRYRLNEDEIIG--------LAKKAKDYGYKTIVMQSGEDEYY 114

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I K        ++ I  +     +  ++ Y++AG +R  + +++ +++ 
Sbjct: 115 TVERLKYIISNIKKL-------DVAITLSIGEKTMEEYKAYKEAGADRYLIRIETTDKKL 167

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +    +  E    +   +++   +    +  LP QT+     ++        D L +
Sbjct: 168 YEDMDPGMSHEERKRCLKDLKSLGYEVGTGCLIGLPGQTIESLADDILFFKEIGADMLGI 227

Query: 205 YQLTIEKGTLFYK 217
                 K T   K
Sbjct: 228 GPFIPNKDTPLAK 240


>gi|229181068|ref|ZP_04308401.1| hypothetical protein bcere0005_44120 [Bacillus cereus 172560W]
 gi|229193036|ref|ZP_04319992.1| hypothetical protein bcere0002_46870 [Bacillus cereus ATCC 10876]
 gi|228590483|gb|EEK48346.1| hypothetical protein bcere0002_46870 [Bacillus cereus ATCC 10876]
 gi|228602396|gb|EEK59884.1| hypothetical protein bcere0005_44120 [Bacillus cereus 172560W]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    ++   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIKVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|167630431|ref|YP_001680930.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
 gi|238066299|sp|B0TIH8|RIMO_HELMI RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|167593171|gb|ABZ84919.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
          Length = 460

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI----QSFL-TEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC   +   R++   E  I    +S +   +Q    +    +   +   G    
Sbjct: 171 CDNRCGYCAIPNLRGRFRSRSEESIVEETRSLVDRGIQEALLIAQDTTCYGVDRYGEF-- 228

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +A ++  +A    +       +   PS       +           + L +Q  
Sbjct: 229 -----RLAQLIGKLASIDGLRWIR--LMYCYPSHFTPELIEAMAAEPKVCRYVDLPLQHA 281

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           +++ LR + R+    E    I   R   P ++     I  LP +T  +++  L       
Sbjct: 282 DDELLRSMNRHAGVDEIRRLIRTLRERLPGLAIRTSFIVGLPGETEEKFQRLLDFLAEMR 341

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D + ++  + E+ T   K+
Sbjct: 342 FDRVGIFTYSREENTPAGKL 361


>gi|83595099|ref|YP_428851.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodospirillum
           rubrum ATCC 11170]
 gi|123753019|sp|Q2RMT1|MIAB_RHORT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83578013|gb|ABC24564.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodospirillum rubrum
           ATCC 11170]
          Length = 467

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 57/197 (28%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   L E   + +  G R I+ +      + G  P 
Sbjct: 161 CDKFCTFC---VVPYTRGAEYSRPVADVLREAALLAE-GGVREITLLGQNVNAYHGEAP- 215

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQS 139
                    +         +     +     +P  V+ +    +R+       I L VQS
Sbjct: 216 ---DGRTWGLGRLARALAEIPGVARLRYTTSHPRDVDDDLIAAHREVAALTPFIHLPVQS 272

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H+       I   R        S D I   P ++   ++  L      
Sbjct: 273 GSDRILAAMNRGHDVEGYRRIIDRLRAARDDMAFSSDFIVGFPGESERDFQATLALIDEV 332

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 333 RFIQAYSFKYSPRPGTP 349


>gi|53804965|ref|YP_113360.1| oxygen-independent coproporphyrinogen III oxidase family protein
           [Methylococcus capsulatus str. Bath]
 gi|53758726|gb|AAU93017.1| putative oxygen-independent coproporphyrinogen III oxidase family
           protein [Methylococcus capsulatus str. Bath]
          Length = 504

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 24/233 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC +C   S + R     E   F+ +        R+           F     + + 
Sbjct: 173 CPFKCEFC--LSALDRTARPFETGRFLAAME---DLYRRGVRHFKFVDRTFNLNIGTSL- 226

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQ 143
                 IL+          ++ +  E  P  +     +   +   G  ++ +GVQS + +
Sbjct: 227 -----RILEFFLDKA--DPSLFLHFEVIPDHLPDRLKEALARFPPGCLQLEIGVQSFDPE 279

Query: 144 SLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               + R  + +   A +   R      +  DLI  LP +T+  +     R ++     +
Sbjct: 280 VQARISRRQDNAATEANLSWLRRHTHAHLHVDLIAGLPGETLEGFARGFDRLIALDPHEI 339

Query: 203 SLYQLT------IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +  L       I++ T    M  +           V  +   Q +       
Sbjct: 340 QVGILKRLRGAPIDRHTRSCGMRYNPHPPYNVVRTDVLDFMALQRLNRFARYW 392


>gi|260061724|ref|YP_003194804.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Robiginitalea
           biformata HTCC2501]
 gi|88785856|gb|EAR17025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Robiginitalea biformata
           HTCC2501]
          Length = 481

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 4/112 (3%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + ++  +   +     N I L VQS  ++ L+ + R H   E    I   R + P
Sbjct: 273 SNPQDMTLDVIETMARFDNICNYIHLPVQSGSDRILKAMNRLHTREEYFGLIDNIRRLIP 332

Query: 170 RMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D+I   P +T    +  L        D   ++  +   GTL  +  
Sbjct: 333 DCGISQDMIAGFPTETEEDHQQTLSLMDYVKYDFGFMFAYSERPGTLAARKM 384


>gi|289523492|ref|ZP_06440346.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503184|gb|EFD24348.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 463

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 70/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----FGGGTPSL 83
           C + C YC                ++    E++ +        + +      +G G    
Sbjct: 161 CNRFCSYC---IVPFLRGRPTSRSVKEVAEEVKRLVDHGCKEVVLTGIHLGLYGYGC--- 214

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
               ++  +++ +++   +      +IE  P ++         ++ +    + + +QS +
Sbjct: 215 --DFDLGDLINALSRIEGLRRLRFGSIE--PHALSDRLIDVLAESDIFCRHLHVPLQSGD 270

Query: 142 EQSLRFLGRNHNASE---AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++ L  + R + A +    I  I         +S D+I   P +    ++  L    +  
Sbjct: 271 DRILSLMQRGYRAEDFINIIRKIRRKLGDDVHISTDIIVGFPGEDEDAFQNTLNLVDALG 330

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           +  + ++  +   GT  Y M 
Sbjct: 331 IGRVHVFPFSPRSGTKAYDMP 351


>gi|189501087|ref|YP_001960557.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496528|gb|ACE05076.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1]
          Length = 509

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 69/194 (35%), Gaps = 10/194 (5%)

Query: 32  CPY-CDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI---FFGGGTPSLIEP 86
           CPY CDF N         +       L E+  + +     S+  +   F        ++ 
Sbjct: 175 CPYQCDFCNVTALLGHKIRTKTSDQILRELDAIDERGWRESVFFVDDNFIAHKA--YLKK 232

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  +++  A   T S         N +  +    +   +AG N++ +G+++ +  +L 
Sbjct: 233 DLLPKLIEWQASKKT-SRKFFTECSINIAD-DPELMELMVRAGFNQVFIGIETPDNSALE 290

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             G+ H  + + +  I   +     +    I      T + ++ +++   +  +    + 
Sbjct: 291 SCGKQHNTSRDMLENIKRIQRAGLEVQGGFIVGFDTDTPSTFQQQIEFIQNSGIVTAMVG 350

Query: 206 QLTIEKGTLFYKMH 219
            L    GT  Y+  
Sbjct: 351 MLQALPGTKLYERM 364


>gi|295090977|emb|CBK77084.1| radical SAM protein, TIGR01212 family [Clostridium cf.
           saccharolyticum K10]
 gi|295115991|emb|CBL36838.1| radical SAM protein, TIGR01212 family [butyrate-producing bacterium
           SM4/1]
          Length = 345

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 49/274 (17%)

Query: 28  CVKK--------CPYC------DFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           C  +        C +C      DF        +       Q+  ++++  ++    +   
Sbjct: 39  CPNRDGTLGTGGCIFCSEGGSGDFAQKAGPGLRQDGPELTQAVFSQIEQAKERVSAKIKD 98

Query: 73  S---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
                +F   T +      +  +      +  V +   ++I   P  +         +  
Sbjct: 99  GKYIAYFQSYTNTYAPVSYLERLFSAALSHPDVEA---LSIGTRPDCLSGETVALLSRLN 155

Query: 130 VNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             +   + LG+Q++ E++ R + R +     + A    +     +   +I  LP ++ + 
Sbjct: 156 QIKPVWVELGLQTIHEKTARLIRRGYELPCFLDAFERLKTAGLSVIVHVILGLPGESRSD 215

Query: 187 WEMELQRALSYA------------------------VDHLSLYQLTIEKGTLFYKMHKDG 222
               ++   S                          +D + L  L I KGT   ++++  
Sbjct: 216 MLETVRFLGSLRAGGLQTPSLPAGSALSAEAPGTDHIDGIKLQLLHILKGTELARLYERE 275

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +      V L      +     +    IS  
Sbjct: 276 PFPVMEPEEYVSLIADCIRLLPQDIVIH-RISGD 308


>gi|237740401|ref|ZP_04570882.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422418|gb|EEO37465.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 301

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 77/251 (30%), Gaps = 21/251 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  N          ++  +    ++  + +          +F   
Sbjct: 25  CPNRDGKVSRGGCIFCSENGSGDFTATKLKSIHEQIEEQIDLVSKKYKGDK-YIAYFQNF 83

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
           T +  E   +  I      +  +   V + I   P  +  +  +   +        + LG
Sbjct: 84  TNTYAEVSYLRKIYQEALSHEKI---VGLAIATRPDCLGDDVLELLAELNKKTFLWVELG 140

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ +   ++  R +       A      +  +    +I  LPK+    +      A +
Sbjct: 141 LQTVNDDVAKYFNRAYETEIYKNASEKLNRLNIKFVTHIIIGLPKEEEDDYLKTAIFAQN 200

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                + L+ + + K T   K++ +GDL     N   +      +I         EI  H
Sbjct: 201 CGTWGIKLHLMYVVKNTPLEKLYLNGDL---KVNTKEEYVEKVINILENISP---EIVVH 254

Query: 257 SFLGAESLHNL 267
              G      L
Sbjct: 255 RLTGDGDRETL 265


>gi|326388653|ref|ZP_08210246.1| MiaB-like tRNA modifying enzyme [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326206904|gb|EGD57728.1| MiaB-like tRNA modifying enzyme [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 405

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 26/208 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFG------ 77
           C   C +C                +   L  ++    L     + +      +G      
Sbjct: 131 CDHACTFC---IIPLGRGHSVSTPVARVLRAIEAHLALGVNEIVLTGVDVTGWGADLAPK 187

Query: 78  --GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
             GG P L     +  IL        +  +    +E     ++   F+        +  I
Sbjct: 188 PEGGMPRL--GDLVGAILAHFPDLPRLRLSSLDGVE-----IDDRLFEILTGEPRVMPHI 240

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L +QS ++  L+ + R H+  +A+  I   R   P ++   D+I   P +T       L
Sbjct: 241 HLSLQSGDDMVLKRMKRRHSRGQALFLIERLRLYRPDIAIGADIIAGFPTETEAMHANNL 300

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMH 219
               +  + H  ++  +   GT   +M 
Sbjct: 301 SLIAAAGIVHGHIFPYSPRPGTPATRMP 328


>gi|319778544|ref|YP_004129457.1| tRNA-i(6)A37 methylthiotransferase [Taylorella equigenitalis MCE9]
 gi|317108568|gb|ADU91314.1| tRNA-i(6)A37 methylthiotransferase [Taylorella equigenitalis MCE9]
          Length = 469

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 11/204 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC       R +          +       Q     ++          ++ E  
Sbjct: 185 CSKYCSYC--VVPYTRGEEISRPLEDVLIEVADLADQGVKEINLLGQNVNAYRGTVGEDG 242

Query: 87  --QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              + A++L+ I     V     IT  ++P  +     + + K    V  + L VQ+  +
Sbjct: 243 EIADFAMLLELIHDIPGVERIRYIT--SHPKEMTKRLIEAHAKLPKLVPFLHLPVQAGSD 300

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + + E  + +           +S D I   P +T   +E  L+      +D
Sbjct: 301 RVLAAMKRGYTSLEYKSVVRSLYKARPGLTLSSDFIVGFPGETEDDFEATLKLIKDLNID 360

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL 224
               +  +   GT    +  D   
Sbjct: 361 TSFSFIYSRRPGTPAADLPDDTPY 384


>gi|310826527|ref|YP_003958884.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
 gi|308738261|gb|ADO35921.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
          Length = 435

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC            +   + + L+E++ +        + + I        L + 
Sbjct: 155 CNQFCTYC---IVPFARGPVRSRPVDAVLSEVKRVAAHGYAEVVLTGIHIASYGVDLGDG 211

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
            ++  ++  + K   V      ++E  P  +     QG  +  A      L +QS  +  
Sbjct: 212 VDLLSLIRAVDKVEGVKRIRLGSLE--PLLLTEEFVQGLSEVRAFCPHFHLSLQSGCDTV 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  +GR +  ++    +   R  F  P ++ D++   P +T  ++E  L          +
Sbjct: 270 LSRMGRKYTTAQYAEIVKRVRRAFDYPAITTDIMVGFPGETEEEFEATLAFVEQIHFYQV 329

Query: 203 SLYQLTIEKGT 213
            +++ +  KGT
Sbjct: 330 HVFKYSRRKGT 340


>gi|238927738|ref|ZP_04659498.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
 gi|238884454|gb|EEQ48092.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
          Length = 519

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 75/232 (32%), Gaps = 32/232 (13%)

Query: 34  YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGG------TPSL--- 83
           +C F          +   + +   EM+ +        + + I  G         P+L   
Sbjct: 245 FCSFCIIPYARGPVKSRPLAAVAREMEKLAAAGFREVVLTGIHLGAYGIDLPQRPTLADA 304

Query: 84  ----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
               +  + +  +  G  ++  +S ++   +   P                  + L +Q+
Sbjct: 305 CRTALRTKEVRRLRLGSLESVELSEDLLSLVRTEPRFAP-------------HLHLPLQA 351

Query: 140 LEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
             +  LR + R ++    ++ +A +  A      +S D+I   P +T   +   L    +
Sbjct: 352 GSDNVLRAMNRRYDTAAFAQLLADVRRAVP-GAAISTDIIVGFPGETEEDFTAGLDFVRA 410

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                + ++  +  +GT   +   D          A  +  L + +  A+  
Sbjct: 411 MGFARMHVFPYSARRGTPAARR-TDQIAPPVRRERAARMQALAEEMAEAYHR 461


>gi|218295686|ref|ZP_03496482.1| 2-alkenal reductase [Thermus aquaticus Y51MC23]
 gi|218243845|gb|EED10372.1| 2-alkenal reductase [Thermus aquaticus Y51MC23]
          Length = 224

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG-VNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P +   +  +   +   + R I L VQS  ++ LR + R +  +  +  I   R  
Sbjct: 9   LTSHPVNFTDDIIEAIAETPAITRYIHLPVQSGSDRVLRRMAREYRRAHYLERIRKIREA 68

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +  S D+I   P +T   ++  L        D   ++  +   GT  YK  +     
Sbjct: 69  LPDVVLSTDIIVGFPGETEEDFQETLSLYDEVGYDQAYMFIYSPRPGTPAYKHFQ----D 124

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYE 252
           LP E     L  L +           E
Sbjct: 125 LPREVKVERLQRLIEKQKEWSYRRNLE 151


>gi|332525075|ref|ZP_08401254.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rubrivivax benzoatilyticus JA2]
 gi|332108363|gb|EGJ09587.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rubrivivax benzoatilyticus JA2]
          Length = 555

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 66/210 (31%), Gaps = 24/210 (11%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  I+     +  +  L    
Sbjct: 187 YIYIPMNKRVAIPNFARGCPFTCSFCS------QWKFWRDYRIRDPKKVVDEIEVLVKQH 240

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRK 127
            +         P++    +    ++   +       V   I    + +  +      +RK
Sbjct: 241 DVGFFILADEEPTI----HRKKFIEFCEELIKRDLGVLWGINTRVTDILRDEKLLPLFRK 296

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  +SLG ++  +  L    +     +   AI L ++         I  L  +T    
Sbjct: 297 AGLIHVSLGTEAAAQLKLDMFNKETTIEQNKRAIQLLKDNGIVTEAQFIVGLENETAETL 356

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           E   + A  +  D  +    T    +  ++
Sbjct: 357 EETYRMARDWNPDMANWAMYTPWPFSDLFQ 386


>gi|326391000|ref|ZP_08212549.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325992945|gb|EGD51388.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 345

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++  E        ++    +        ++    G     
Sbjct: 60  CKQNCLYCGLRRDNKNIKRYRLKPE--------QIINFAKNARNLGYRTVVLQSGEDDFF 111

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I +        +I I  +        ++ Y++AG +R  L +++ +++ 
Sbjct: 112 NVERMTKIIKSIKQL-------DIAITLSIGEKTREEYKAYKEAGADRYLLRIETTDKEL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L  N +       +   + +   +    +  LP QT+     ++        D + +
Sbjct: 165 YEKLDPNMSHENRKRCLKDLKELGYEVGTGCLIGLPGQTIESIADDILFFKEIDADMIGV 224

Query: 205 YQLTIEKGTLFYK 217
                   T    
Sbjct: 225 GPFIPNPDTPLKN 237


>gi|268679070|ref|YP_003303501.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268617101|gb|ACZ11466.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 438

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 89/264 (33%), Gaps = 25/264 (9%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFF 76
           YV+    C KKC YC     V   +  + +     + +        G + I     ++  
Sbjct: 147 YVNISIGCDKKCTYC----IVPHTRGDEISIPADLIIKEAQKAAQKGAKEIFLLGQNVNN 202

Query: 77  GGGTPSLIEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            G   S    +  + + +L+ +++   V          +P  ++    + +         
Sbjct: 203 YGKRFSSSTHEKMDFSDLLNRVSEIEEVERIRF--TSPHPLHMDDKFLETFAHNPKVCKS 260

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAI-AAIHL-ARNIFPRMSFDLIYALPKQTMTQWEME 190
           + + +QS   Q L  + R ++    +  A+ L A      +S D+I   P ++   +E  
Sbjct: 261 MHMPLQSGSTQILAAMKRGYSKEWFLDRALKLRAMIPDVSISTDIIVGFPGESDADFEDT 320

Query: 191 LQRALSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           L        + +  ++ +    T    F     +       + + V    +   I ++  
Sbjct: 321 LDVMRQVRFEQVFAFKYSARPLTKAAEFTNQVDNEVASERLDRLQVMQDTILDEIATSRT 380

Query: 248 LHAY-----EISNHSFLGAESLHN 266
              Y     E+ N  FL   + +N
Sbjct: 381 DKIYPVYIDELRNSGFLAGRTDNN 404


>gi|224367276|ref|YP_002601439.1| BioB1 [Desulfobacterium autotrophicum HRM2]
 gi|223689992|gb|ACN13275.1| BioB1 [Desulfobacterium autotrophicum HRM2]
          Length = 348

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG-TPSLIE 85
           +CV  C YC     +RR     + +       ++ + Q    R + +    GG  P    
Sbjct: 58  YCVSNCLYCG----IRRENRKVQRYRIKENRLLE-VIQAGFDRGLRTFVIQGGEDPCY-P 111

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I  +++ I +     +  E  +  +        +    +AG +R  +  ++ + +  
Sbjct: 112 VERICRLVEAIKQ----KTRGEAAVTLSCGMRSREEYGEMVQAGADRYLIRFETSDPKLH 167

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L       + + A+   R    +     +  LP +T       +       +D + + 
Sbjct: 168 ACLRDGKTLKDRLQALEDTRTAGFQTGSGFMLGLPGETPEVRLENILLCQRLELDMVGIG 227

Query: 206 QLTIEKGTLF 215
                  T  
Sbjct: 228 PFIPHPDTPL 237


>gi|116696108|ref|YP_841684.1| hypothetical protein H16_B2172 [Ralstonia eutropha H16]
 gi|113530607|emb|CAJ96954.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C +   V  ++  +    +S + E++W+++      +  I F   T +  +P 
Sbjct: 207 CRSRCTFCLWPQTVGGHR-YRTRSAESVIAEVKWIKENMP--EVKEIMFDDDTFTDFKPR 263

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 264 VEEIARGLGQLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    E  ++ A       + + 
Sbjct: 315 LNIKKGLRTDIARRFTEDCRKLGIQIHGTFILGLPGETRETIEKTIEYAKEINPHTIQVS 374

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y+ 
Sbjct: 375 LAAPYPGTTLYRQ 387


>gi|170744383|ref|YP_001773038.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium sp. 4-46]
 gi|168198657|gb|ACA20604.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Methylobacterium sp. 4-46]
          Length = 479

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 73/228 (32%), Gaps = 10/228 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   +   + E+++  +               T +L   Q
Sbjct: 206 CKSRCTFCLWPQTVG-GHTYRTRSVGHVIEEIKYCLKAFPQTKEFFFDDDTFTDNLPRAQ 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  R  G+  + +G +S  +Q L  
Sbjct: 265 EIARELGKLGVTWSCNAKA---------NVPRETLKVLRDNGLRLLLVGYESGNQQILHN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++   +    I  LP ++    +  ++ A       + +   
Sbjct: 316 IKKGMRVEVAEKFTKDCHDLGIAIHGTFILGLPGESKETIQETIKFATRINPHTIQVSLA 375

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               GT  YK   +   +  +    VD   +  +      L   EI N
Sbjct: 376 APYPGTFLYKQAVENGWLDEANAELVDENGVQIAPLHYPHLSHTEIFN 423


>gi|41614804|ref|NP_963302.1| hypothetical protein NEQ008 [Nanoarchaeum equitans Kin4-M]
 gi|40068528|gb|AAR38863.1| NEQ008 [Nanoarchaeum equitans Kin4-M]
          Length = 413

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 14/195 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C YC         K+ +  F       ++   +    + I   +  G   +        
Sbjct: 142 RCTYCG-------TKLARSMFYSYPPKLIKREIEEKLKQGIKIFYLTGPDTATYGKDINY 194

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSLEEQSL 145
            + D +     +  +  I +     +  +                    L VQS   + L
Sbjct: 195 SLADLLKDLIEIEGDFYIRVGMANPTFFLEQIDELIDVFKSNKIFKFFHLPVQSGSNKVL 254

Query: 146 RFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    I+  R  FP      D+I   P +T   +E  L+       D ++
Sbjct: 255 KDMNRPYTIEEYKELIYKLRKHFPLATYVTDIIVGYPTETEEDFEQTLELVREIKFDGIN 314

Query: 204 LYQLTIEKGTLFYKM 218
           + +     GT+ + +
Sbjct: 315 ISRFWRRPGTIAWNL 329


>gi|307709516|ref|ZP_07645972.1| radical SAM superfamily protein [Streptococcus mitis SK564]
 gi|307619735|gb|EFN98855.1| radical SAM superfamily protein [Streptococcus mitis SK564]
          Length = 318

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYETTSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|282849374|ref|ZP_06258759.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282581078|gb|EFB86476.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 372

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G     +  
Sbjct: 65  CIKNCNYCG----IRRENDKTERF-DMNREDIIKMAQWAYDHEYGSITLQSGE--RCDDA 117

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++D I     +  +  + I           ++  R+AG +R  L +++        
Sbjct: 118 FVDYVVDLIRDIKAI-GDGSLGITMCVGEQSEEAYRRMREAGASRYLLRIETTNTDLYHK 176

Query: 148 LGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 177 IHPRDELHSFETRVECLRRLRRVGFQVGTGVMIGLPGQTEDDLVNDILFYRDMDIDMIGM 236

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 237 GPYVVHHDTPLGQ 249


>gi|167754793|ref|ZP_02426920.1| hypothetical protein CLORAM_00297 [Clostridium ramosum DSM 1402]
 gi|167705625|gb|EDS20204.1| hypothetical protein CLORAM_00297 [Clostridium ramosum DSM 1402]
          Length = 428

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 9/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +    +S L + Q +        + +     G    ++  
Sbjct: 152 CNNFCTYC---IIPYARGRVRSRQKESVLNQAQKLVDNGYVEIVLTGIHTAGYGEDLDDY 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
           +   +L  + K   +      +IE +   +           +  V+ + + +Q+  + +L
Sbjct: 209 SFYELLVDLVKIKGLKRLRISSIETS--QISDEIIDLIGSNEIIVDHLHVPLQAGSDATL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +E +  I+  R+  P ++F  D+I   P +T  ++E             L 
Sbjct: 267 KRMNRKYTTAEYLEKINKIRSYLPNIAFTTDVIVGFPGETDEEFEETYNFIKQVNYSELH 326

Query: 204 LYQLTIEKGTLFYKM 218
           ++  +  K T   KM
Sbjct: 327 VFPYSPRKNTPAAKM 341


>gi|195953226|ref|YP_002121516.1| RNA modification enzyme, MiaB family [Hydrogenobaculum sp. Y04AAS1]
 gi|229890609|sp|B4U8S7|MIAB_HYDS0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|195932838|gb|ACG57538.1| RNA modification enzyme, MiaB family [Hydrogenobaculum sp. Y04AAS1]
          Length = 435

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 31/269 (11%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C K+C YC   F     R +  Q        + +  ++ L     +     G    +  +
Sbjct: 156 CDKECTYCVVPFTRGKERSRNPQ--------SILDEVKSLVDSGVMEIHLIGQNVTAYGK 207

Query: 86  PQNI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +     +L+ I+K   V      T   +P  +  +  +        VN + L  Q+  
Sbjct: 208 DIDYPFYKLLENISKIEGVKRIRFTT--GHPIDMTDDIIETMANLPNMVNHLHLPFQAGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + RN+  +  +  I   +     +  S D+I   P +T   ++  L    +   
Sbjct: 266 DRILELMKRNYTKAYYLNRIEKLKAKIKDITFSTDIIIGFPTETEEDFQHTLDVVQTVEF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + +  ++ +    T  Y  + + DL    +   +      Q   ++  +  Y+ +    L
Sbjct: 326 EQVFSFKYSKRPNTPAY--YMEDDLTDEIKTDRIKRLLEIQKAITSKLMQRYKNTVQKVL 383

Query: 260 GAESLHN-------LNYWRY----GDYIG 277
             +   N        N W       D +G
Sbjct: 384 VEDKKGNTYIGRTTTNVWCNITSSQDILG 412


>gi|333024041|ref|ZP_08452105.1| putative tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp.
           Tu6071]
 gi|332743893|gb|EGJ74334.1| putative tRNA-I(6)A37 thiotransferase enzyme MiaB [Streptomyces sp.
           Tu6071]
          Length = 484

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 119 ESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 176

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 177 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGGIEGLERVRF--TSPHPRDFTDD 234

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     +  I   R   P   +S D+I
Sbjct: 235 VIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSYRQDRYLGIIEKVRAAIPDAAISTDII 294

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 295 VGFPGETEEDFEQTLHVVREARFAAAFTFQYSKRPGTPAAEM 336


>gi|332519830|ref|ZP_08396294.1| RNA modification enzyme, MiaB family [Lacinutrix algicola 5H-3-7-4]
 gi|332044389|gb|EGI80583.1| RNA modification enzyme, MiaB family [Lacinutrix algicola 5H-3-7-4]
          Length = 479

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 79/242 (32%), Gaps = 22/242 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIFFGGG---T 80
           C   C +C   F     R +  Q     I    ++      L G    S +++GGG    
Sbjct: 178 CDNMCTFCVVPFTRGRERSRDPQSIIEEINDLWSKGYKEITLLGQNVDSYLWYGGGLKKD 237

Query: 81  PSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            S             + +L   A+          T  +NP  + +   +   K     N 
Sbjct: 238 FSKASDIQKATAVDFSKLLQICAEAQPKMRIRFST--SNPQDMSLEVIKTMAKYKNICNH 295

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEME 190
           I L VQS  ++ L+ + R H   E    I   + I P   +S D+I   P +T    +  
Sbjct: 296 IHLPVQSGSDRILKAMNRLHTRKEYFTLIDNIKTIIPDCAISQDMIAGFPTETEEDHQDT 355

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L        +   ++  +   GTL  +     D  +P    +  L  + +       L  
Sbjct: 356 LSLMEYVKYNFGYMFTYSERPGTLAERK---LDDDIPEAVKSRRLKEIIELQLKHSELRT 412

Query: 251 YE 252
            E
Sbjct: 413 RE 414


>gi|318060989|ref|ZP_07979710.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Streptomyces
           sp. SA3_actG]
 gi|318077279|ref|ZP_07984611.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Streptomyces
           sp. SA3_actF]
          Length = 484

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 68/222 (30%), Gaps = 9/222 (4%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L A+ + +  +  ++   +V     C   C +C       R K               
Sbjct: 119 ESLEAFPSTLPTRRESAYAAWVSVSVGCNNTCTFC--IVPALRGKEKDRRPGDILAEVEA 176

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            + +     ++           + + +  + +L        +          +P     +
Sbjct: 177 LVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGGIEGLERVRF--TSPHPRDFTDD 234

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLI 176
                 +    + ++ + +QS  +  LR + R++     +  I   R   P   +S D+I
Sbjct: 235 VIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSYRQDRYLGIIEKVRAAIPDAAISTDII 294

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              P +T   +E  L             +Q +   GT   +M
Sbjct: 295 VGFPGETEEDFEQTLHVVREARFAAAFTFQYSKRPGTPAAEM 336


>gi|196043945|ref|ZP_03111182.1| conserved hypothetical protein TIGR01212 [Bacillus cereus 03BB108]
 gi|225866740|ref|YP_002752118.1| conserved hypothetical protein TIGR01212 [Bacillus cereus 03BB102]
 gi|229187008|ref|ZP_04314159.1| hypothetical protein bcere0004_45490 [Bacillus cereus BGSC 6E1]
 gi|196025281|gb|EDX63951.1| conserved hypothetical protein TIGR01212 [Bacillus cereus 03BB108]
 gi|225788751|gb|ACO28968.1| conserved hypothetical protein TIGR01212 [Bacillus cereus 03BB102]
 gi|228596460|gb|EEK54129.1| hypothetical protein bcere0004_45490 [Bacillus cereus BGSC 6E1]
 gi|324328647|gb|ADY23907.1| hypothetical protein YBT020_23395 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 319

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMKT 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|145641843|ref|ZP_01797418.1| hypothetical protein CGSHiR3021_01197 [Haemophilus influenzae
           R3021]
 gi|145273465|gb|EDK13336.1| hypothetical protein CGSHiR3021_01197 [Haemophilus influenzae
           22.4-21]
          Length = 328

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 14/175 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F              +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    YR     V+ + L VQ+  
Sbjct: 211 HDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           ++ L  + R H A E  + I    A     ++S D I   P +T   +E  +   
Sbjct: 271 DRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLI 325


>gi|148656015|ref|YP_001276220.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Roseiflexus
           sp. RS-1]
 gi|229890636|sp|A5UUG7|MIAB_ROSS1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|148568125|gb|ABQ90270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseiflexus sp. RS-1]
          Length = 476

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 79/228 (34%), Gaps = 21/228 (9%)

Query: 23  VHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----- 74
           VH P    C   C +C       R    +   +   + E + +    G + I+ +     
Sbjct: 162 VHVPIQYGCNMSCSFC---VIPLRRGRERSRPLDEIVEECRRIVAR-GAKEITLLGQIVD 217

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            +G   P      ++A +L  +     +       + ++P+ +         +    +  
Sbjct: 218 SWGHDLP---GRPDLADLLRAVHDIPGLLRLRF--LTSHPAWMTDRLIAAVAELPRCMPD 272

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I+L VQ+ ++  L+ + R +        I   R+  P +S   D+I   P +T  ++E  
Sbjct: 273 INLPVQAGDDALLKIMRRGYTVQRYRDLIAKIRDAIPDVSLTTDVIVGHPGETRERFEGT 332

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +       D + +   +   GT    M  D  L +P     +    L
Sbjct: 333 KRLLEDIRFDKVHIAAFSSRPGTRAADMELDPTLAVPEGEKQLRRIEL 380


>gi|299535792|ref|ZP_07049113.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1]
 gi|298728992|gb|EFI69546.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1]
          Length = 444

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 80/234 (34%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  L + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N+A +L D  A    +      +IEA+   +     +  R++   VN + + +QS  +  
Sbjct: 210 NLAQLLRDLEANVKGLKRLRISSIEAS--QLTDEVIEVLRESKIVVNHLHIPIQSGSDTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +       P ++   D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMEFFGERLTKLHEALPDLAVTSDVIVGFPGETEEEFMETYNFIRDHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +E V   +     L +   S       E+
Sbjct: 328 HVFPFSPRTGTPAARMEDQIDEDIKNERVHRLISLNDQLAKEYASRFEDQVLEV 381


>gi|325680283|ref|ZP_08159843.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus albus 8]
 gi|324107992|gb|EGC02248.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus albus 8]
          Length = 465

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 31/240 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C   C YC     +  Y  G+E   +     +  +R L   G + I+ +      +  G 
Sbjct: 188 CNNFCTYC-----IVPYVRGRERS-RKPEAVIAEVRSLVEQGYKEITLLGQNVNSYEYGF 241

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQ 138
           P+L+  + I  I       +         + ++P              +     + L VQ
Sbjct: 242 PALL--REIDKIEGKYRIRF---------MSSHPKDATKELIDAIIDCEHVCTHLHLPVQ 290

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           +   + L+ + R +   + +  I  AR+  P  SF  DLI   P +T  ++    +    
Sbjct: 291 AGSNRVLKAMNRRYTVEKYMEMIDYARSRVPDFSFTTDLIVGFPGETYEEFCETKEVIKR 350

Query: 197 YAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              D++  +  +   GT    F     D    L    + ++   +T            E+
Sbjct: 351 VKYDNIYSFVYSRRSGTPAAKFEDHVTDKQKGLWLRELLLEQREITSEWFGRFVGRTVEV 410


>gi|294637486|ref|ZP_06715772.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Edwardsiella tarda ATCC
           23685]
 gi|291089318|gb|EFE21879.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Edwardsiella tarda ATCC
           23685]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 76/242 (31%), Gaps = 30/242 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC                    L E+  +    G R ++ +           F 
Sbjct: 157 CNKYCTYC---VVPYTRGAEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGATFD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG  +      +  ++  I        +      ++P     +    Y      V+ + L
Sbjct: 213 GGICTF---AELLRLVAAIDGI-----DRIRFTTSHPIEFSDDIIAVYEDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  +Q 
Sbjct: 265 PVQSGSDRILNLMKRTHTALEYKAIIRKLRKARPDIQISSDFIVGFPGETQQDFEQTMQL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 D    +  +   GT    M       +P E     LY L + I+     ++  +
Sbjct: 325 IADVDFDMSYSFIFSARPGTPAADMVD----DVPEEEKKQRLYILQERISQQAMRYSRRM 380

Query: 254 SN 255
             
Sbjct: 381 QG 382


>gi|288802435|ref|ZP_06407874.1| Fe-S protein, radical SAM family [Prevotella melaninogenica D18]
 gi|288334963|gb|EFC73399.1| Fe-S protein, radical SAM family [Prevotella melaninogenica D18]
          Length = 473

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 85/254 (33%), Gaps = 29/254 (11%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F S  + +   +   +   L E+  +      R +  +        L+
Sbjct: 170 CPHHCDFCYKDAFYSEGKSFYTRK---VDDALAEIDSL----PGRHLYFLDNH-----LL 217

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P   + + +G+     V  +           +  N  +   +AG+  + LG ++    
Sbjct: 218 GNPHFASELFEGMRGMGRVFQSASTVAAV----LNGNLIEKAAEAGLRSLFLGFETFSPD 273

Query: 144 SLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +LR   +  N + + +AA+    ++   ++   ++ L       +   +   + +++   
Sbjct: 274 NLRSSNKLQNLSKDYVAAVERLHSLGIMINGSFVFGLDHDDKDVFRRTVDWGIEHSITTA 333

Query: 203 SLYQLTIEKGTLFYKMHKDG----DLVLPSENVAVDLYN---LTQSITSAHGLHAYEI-S 254
           + + LT   GT  ++  +             +    +Y    LT          AY    
Sbjct: 334 TFHVLTPYPGTRMFQQMERDGRITSYDWSQYDTRTVVYKTLGLTAEELKQGYEWAYRNFY 393

Query: 255 NHSFLGAESLHNLN 268
           + S +   S  + N
Sbjct: 394 SWSNIFKASFGHDN 407


>gi|298529986|ref|ZP_07017388.1| RNA modification enzyme, MiaB family [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509360|gb|EFI33264.1| RNA modification enzyme, MiaB family [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 443

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 79/235 (33%), Gaps = 20/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     V   +  Q++  +S    +Q    L           G    S  + +
Sbjct: 155 CDNFCAYC----IVPYTRGRQKS--RSSREILQECAGLVARGCREITLLGQNVNSFGQDK 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                  + +L  +A    +      T  ++P  ++    Q + +       + L +QS 
Sbjct: 209 EGRDIPFSELLRSVAALPGLERLRFTT--SHPKDIDEEVIQAFGELPALCPHLHLPLQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +Q L  +GR +N+ + +  +   R+  P +S   DLI   P +T   +E  +       
Sbjct: 267 SDQVLSSMGRKYNSDDYLRIVEKLRSSCPDISLTTDLIVGFPGETDADFEDTMDIVKKVG 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHA 250
            D    ++ +   G     M    D    +E +A        LT+   +      
Sbjct: 327 FDSSFSFKYSDRPGVRAADMQPKIDDETKTERLARLQQLQSELTRDRLAGRVGRQ 381


>gi|159903894|ref|YP_001551238.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9211]
 gi|229890601|sp|A9BBS2|MIAB_PROM4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|159889070|gb|ABX09284.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9211]
          Length = 467

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 16/220 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +S+  +V+  + C ++C YC   S   + +        +   E++ +   
Sbjct: 151 IEDLTTARRDSSICAWVNVIYGCNERCTYCVVPSVRGKEQSRTPP---AIKREIENLAN- 206

Query: 66  TGPRSISSI-----FFGGGTP-SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
           TG + ++ +      +G   P +  + +    + D +     +     I     +P    
Sbjct: 207 TGFKEVTLLGQNIDAYGRDLPGTTPQGRKKNTLTDLLYYIHDIEGIERIRFATSHPRYFT 266

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--D 174
               +   +         +  QS +++ L  + R +        I   R + P  S   D
Sbjct: 267 SRLIEACAELPKVCEHFHIPFQSGDDEILNQMRRGYKIKTYKKIIGRIRELMPNASITAD 326

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +I A P +T  Q++  L        D L+    +    T 
Sbjct: 327 VIVAFPGETNEQFQRSLSLVEEIGFDQLNTAAYSPRPNTP 366


>gi|294012042|ref|YP_003545502.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Sphingobium japonicum UT26S]
 gi|292675372|dbj|BAI96890.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Sphingobium japonicum UT26S]
          Length = 449

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 16/215 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V  Y  G E   +S+   +   + L     +  I   G   +    +
Sbjct: 162 CDKFCTYC-----VVPYTRGAEIS-RSWSAILDEAKALVDG-GVGEITLLGQNVNAWTGE 214

Query: 88  NIALILDGI----AKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +    + G+     +   + +   I     +P+ +       +      +  + L VQS 
Sbjct: 215 DDKGRMQGMDGLVRELAKIDALKRIRYTTSHPNDMSDGLIAAHGDEAKLMPFLHLPVQSG 274

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H+A   +  I   R   P ++   D I   P +T  ++E  L+      
Sbjct: 275 NDRVLKAMNRSHSADSYLRIIERVRAARPDIALSGDFIVGFPGETDAEFEDTLKIVEQVR 334

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                 ++ +   GT    M       +  E +A 
Sbjct: 335 YAQCYSFKYSPRPGTPAADMDGQIPAEVMDERLAR 369


>gi|257063789|ref|YP_003143461.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
           [Slackia heliotrinireducens DSM 20476]
 gi|256791442|gb|ACV22112.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
           [Slackia heliotrinireducens DSM 20476]
          Length = 451

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 14/169 (8%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           ++P  +     + +   G  +  + L VQS  +  L+ + R++     +  I   R   P
Sbjct: 244 SHPKDLTDEVIEAFGTLGNLMPALHLPVQSGSDAILKRMHRSYTVEHYLGLIDKLRAACP 303

Query: 170 RMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            +S   D+I   P +T   ++             +  +  +  +GT   KM  D    + 
Sbjct: 304 DISLSTDIIVGFPGETEEDFQATYDLVEKVGYSQVFTFIYSPREGTPAAKMKDDTPRSVI 363

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEI----------SNHSFLGAESLHN 266
            E     +  +       +   A              N S +   S HN
Sbjct: 364 QERFERLVQMVQDKAYEQNQRFADRTLDVLVEGVSQRNDSIIAGRSPHN 412


>gi|188590566|ref|YP_001919521.1| radical SAM protein, family [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500847|gb|ACD53983.1| radical SAM protein, family [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 312

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 57/165 (34%), Gaps = 3/165 (1%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNF---QGYRKAGVNRISLGVQSLEEQSL 145
           I  +     +       V ++I   P  +E +     +   K     + LG+Q++ +   
Sbjct: 101 IDELRQKYEEAINQEGVVALSIATRPDCLEDDVLDLIEELSKKLYVWVELGLQTINDNVA 160

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R ++      A+   +     +    I  LP ++       +          + L+
Sbjct: 161 KKINRGYDLKVFDYAMTRLKERNIDVVVHSILGLPGESQDDMLKTIDYIAHSGAQGIKLH 220

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + K T   ++++ G+L   S+   + L     S+     +  
Sbjct: 221 LLHLMKDTKMVELYESGELQFLSQEDYIKLICKAVSMLPKEMVVH 265


>gi|163753851|ref|ZP_02160974.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase [Kordia
           algicida OT-1]
 gi|161326065|gb|EDP97391.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase [Kordia
           algicida OT-1]
          Length = 487

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 14/228 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEP 86
           C  KC +C    +  RY      +I      ++++ +  G  R        G  P+ +  
Sbjct: 213 CPFKCNWCAKPIYGNRYNSHSPAYI---TKHIKYLSETYGVHRFWMCDDIFGLKPNWV-- 267

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           QN     +   +N T+S  ++  ++     ++ +  +   ++G+  + +G +S  +  L 
Sbjct: 268 QNFNK--ELKKENLTISYYIQSRVDL---LLKEDTIEALAESGLEEVWVGAESGSQAILD 322

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +   A  L +    R++F + +   ++T    +  +        D++ +  
Sbjct: 323 AMDKETKVEQIYEATRLLKEKNVRVAFFIQFGYLEETKEDIQKTIDMIKELVPDNIGVSV 382

Query: 207 LTIEKGTLFYKMHKDG---DLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                GT FY   KD           +    ++  T +      L  Y
Sbjct: 383 SYPLPGTKFYDKVKDDLKLKANWTDSDDLAMMFKGTYNTQFYRKLQRY 430


>gi|331266077|ref|YP_004325707.1| Radical SAM superfamily protein [Streptococcus oralis Uo5]
 gi|326682749|emb|CBZ00366.1| Radical SAM superfamily protein [Streptococcus oralis Uo5]
          Length = 312

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTFEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|323705356|ref|ZP_08116931.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535258|gb|EGB25034.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 473

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 67/212 (31%), Gaps = 14/212 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +  ++ L           G    S    +
Sbjct: 188 CNNFCTYC-----IVPYVRGRERS-REPKDIIDEIKSLADEGFKEITLLGQNVNSYGNDL 241

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +     L  +  N      +   + ++P  +        R        + L VQS   
Sbjct: 242 SQKVDFADLLYMINNINGIERIRF-MTSHPKDISDKLIFAIRDLDKVCEHLHLPVQSGSN 300

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R +     +  I   R+  P ++   D+I   P +T   ++  L        D
Sbjct: 301 RILEKMNRKYTRERYLEIIEKLRDNIPDIAITTDIIVGFPGETDEDFQDTLDLVKKVKYD 360

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
               +  +  KGT+  KM    D  +  + + 
Sbjct: 361 SAYTFIYSKRKGTVAEKMPDQVDEDIKHKRLE 392


>gi|323137809|ref|ZP_08072884.1| MiaB-like tRNA modifying enzyme [Methylocystis sp. ATCC 49242]
 gi|322396812|gb|EFX99338.1| MiaB-like tRNA modifying enzyme [Methylocystis sp. ATCC 49242]
          Length = 385

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 14/228 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          +G+     +   E+    +    R    I   G   +  +  
Sbjct: 116 CDHSCTFC-------IIPLGRGASRSAPPQEIVAQARALVERGKQEIALTGVDLTSYDAD 168

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + L          +     + +   +    + +      +       + L +Q+ ++  
Sbjct: 169 GLRLGGLVRLLLREIPDLPRLRLSSIDCIEADDDLIVAAAEEERLCPHLHLSLQAGDDLI 228

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H+ +EAI      R+  P + F  D I   P +T   +   L       + HL
Sbjct: 229 LKRMKRRHSRAEAIRFCGELRDARPDIVFGADFITGFPTETEEMFTRTLGLVEECGLTHL 288

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++  +   GT   +M +       ++  A  L     +  + H    
Sbjct: 289 HVFPFSPRPGTPAARMPQV--AREVAKERAARLREAGDAALARHLDRQ 334


>gi|295698304|ref|YP_003602959.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Candidatus Riesia
           pediculicola USDA]
 gi|291157316|gb|ADD79761.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Candidatus Riesia
           pediculicola USDA]
          Length = 445

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 22/201 (10%)

Query: 25  WPFCVKKCPYC--------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
              C KKC +C        +F+  +    +  +N +     E+  + Q            
Sbjct: 158 IEGCNKKCSFCIVPFTRGKEFSRPLNEILIEIKNLVSEGCREIHLLGQNVNAYRYVQKNG 217

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
                S +       +++G+ K    S+N       +P+    +    Y      V+ + 
Sbjct: 218 KIYDFSKL--IQKISLINGV-KRIKFSTN-------HPNHFTQDVIDLYSTISQLVDYVH 267

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           + VQS  ++ LR + R +        I   R + P +    D I   P +T   +   +Q
Sbjct: 268 IPVQSGSDEILRKMRRPYTIERYKKIIKKIREVRPDILIGSDFIVGFPGETKEDFLKTIQ 327

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
                  D    +  +   GT
Sbjct: 328 LVKEIDFDVSFSFMYSSRPGT 348


>gi|284929142|ref|YP_003421664.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [cyanobacterium UCYN-A]
 gi|284809601|gb|ADB95306.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [cyanobacterium UCYN-A]
          Length = 478

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  +    ++       EM   + + G  S+   FF   T ++    
Sbjct: 207 CPAKCTFCLWPQTIGGHDYRAKSP-NIVGQEMALAKSIWGN-SVQEYFFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++        ++        AN   ++    +  R  G+  + +G++S  ++ L  
Sbjct: 261 DKKRVIAISEHLKKLNLTWSCNARAN---LDYETLKTLRDNGLRLLLVGLESGNQKVLDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +     +  ++    I  LP +T    E  ++ A   +   + +   
Sbjct: 318 IKKGIKLEVARKFMANCTKLGIKVHGAFIIGLPNETKETIEETIRFACEVSPHTIQVSIA 377

Query: 208 TIEKGTLFYKM 218
           +   GT  YK 
Sbjct: 378 SPYPGTELYKQ 388


>gi|221211289|ref|ZP_03584268.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           CGD1]
 gi|221168650|gb|EEE01118.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
           CGD1]
          Length = 457

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEVADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S DLI   P +T   ++  +      
Sbjct: 271 GSDRILMVMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEEDFDKMMALVHDM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 331 RYDTSFSFIYSPRPGTPAANLH 352


>gi|311068224|ref|YP_003973147.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           atrophaeus 1942]
 gi|310868741|gb|ADP32216.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
           atrophaeus 1942]
          Length = 509

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +  Y  G+E   +     +Q +R+L           G    +  +  
Sbjct: 221 CDKFCTYC-----IVPYTRGKERS-RRPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDF 274

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  ++D + K   +         ++P   + +  +   K G  ++ I L VQS 
Sbjct: 275 DDITYGLGDLMDELRK---IDIPRIRFTTSHPRDFDDHLVEVLGKGGNLLDHIHLPVQSG 331

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R ++ +  +  +   +   P  S   D+I   P +T  Q+E  L       
Sbjct: 332 SSEVLKLMARKYDRARYMELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETLSLYREVE 391

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D    +  +  +GT   KM
Sbjct: 392 FDSAYTFIYSPREGTPAAKM 411


>gi|268317612|ref|YP_003291331.1| RNA modification enzyme, MiaB family [Rhodothermus marinus DSM
           4252]
 gi|262335146|gb|ACY48943.1| RNA modification enzyme, MiaB family [Rhodothermus marinus DSM
           4252]
          Length = 482

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 68/197 (34%), Gaps = 9/197 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C            +   +QS L E   + +  G R ++ +     +    E  
Sbjct: 183 CDNMCAFC---VVPFTRGRERSRPVQSILDECARLVE-EGYREVTVLGQNVNSYRYTENG 238

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +    + + +   +S  + +     +P          +R+     N I L VQ      
Sbjct: 239 TVVTFPELLYRVSLISPELRVRYSTSHPKDCSDELLHVHRERHNVCNYIHLPVQHGNTDV 298

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R +   + +A +  AR I P +S   D+I     +T  +    L        DH 
Sbjct: 299 LRRMRRTYTREQYLALVERARRIVPGISLSTDIIAGFCGETEEEHRDTLSLLEEVRFDHA 358

Query: 203 SLYQLTIEKGTLFYKMH 219
            ++  +   GT   + +
Sbjct: 359 YMFMYSERPGTYAARKY 375


>gi|237735920|ref|ZP_04566401.1| 2-methylthioadenine synthetase [Mollicutes bacterium D7]
 gi|229381665|gb|EEO31756.1| 2-methylthioadenine synthetase [Coprobacillus sp. D7]
          Length = 428

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 9/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +    +S L + Q +        + +     G    ++  
Sbjct: 152 CNNFCTYC---IIPYARGRVRSRQKESVLNQAQKLVDNGYVEIVLTGIHTAGYGEDLDDY 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
           +   +L  + K   +      +IE +   +           +  V+ + + +Q+  + +L
Sbjct: 209 SFYELLVDLVKIKGLKRLRISSIETS--QISDEIIDLIGSNEIIVDHLHVPLQAGSDATL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +E +  I+  R+  P ++F  D+I   P +T  ++E             L 
Sbjct: 267 KRMNRKYTTAEYLEKINKIRSYLPNIAFTTDVIVGFPGETDEEFEETYNFIKQVNYSELH 326

Query: 204 LYQLTIEKGTLFYKM 218
           ++  +  K T   KM
Sbjct: 327 VFPYSPRKNTPAAKM 341


>gi|223986171|ref|ZP_03636192.1| hypothetical protein HOLDEFILI_03502 [Holdemania filiformis DSM
           12042]
 gi|223961879|gb|EEF66370.1| hypothetical protein HOLDEFILI_03502 [Holdemania filiformis DSM
           12042]
          Length = 552

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 64/198 (32%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  +S   R ++  E ++      ++ +  L   R++  + F   T +++   
Sbjct: 178 CPYHCAYC-LSSADNRVRMFSEAYV------LRQLAPL-AERTVKQVKFLDRTYNVMPE- 228

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY---RKAGVNRISLGVQSLEEQS 144
                L       T+  ++    E    ++       +         R  +GVQSL  ++
Sbjct: 229 ---RALRIARFIETLPPSINFQFEVVADTISEAMLDFFEQKADPARYRFEIGVQSLNSKT 285

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R  +    +               DLI  LP +    +E       +     L +
Sbjct: 286 LEAVDRRQDNQRLLEVTSRLLKRGYICHLDLIAGLPYEDRASFEQSYNGLFAVHPSELQV 345

Query: 205 YQLTIEKGTLFYKMHKDG 222
             L + KGT         
Sbjct: 346 GILKLLKGTAMIARAPGW 363


>gi|220932113|ref|YP_002509021.1| MiaB-like tRNA modifying enzyme [Halothermothrix orenii H 168]
 gi|219993423|gb|ACL70026.1| MiaB-like tRNA modifying enzyme [Halothermothrix orenii H 168]
          Length = 438

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
            K L+ YE+    +   +   Y+     C + C YC            +    +S + E+
Sbjct: 126 FKKLTTYEDLNINKVKETTRAYIKIEEGCNQFCSYC---IIPYARGPVRSRKEESVIQEV 182

Query: 60  Q-WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +  +R       ++    G         + +  ++  + K   ++     ++E   + V 
Sbjct: 183 ERLVRAGVKEIVLTGTHLGAYGLDENNDKALVELIQNLVKVKGLARIRLSSLEV--TEVN 240

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--D 174
            +  +           + L +QS     L+ + R +   E    +   R I   ++   D
Sbjct: 241 DDLIRIMGSEDKVCPHLHLPLQSGSNTILKKMKRPYTVEEFKETVDKIRKIIEDIAITTD 300

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +I   P +   ++              L ++  +I +GT   +M
Sbjct: 301 IIVGFPGEGQKEFNESYNTVKELGFSRLHVFPFSIRQGTPAARM 344


>gi|121729822|ref|ZP_01682255.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|121628426|gb|EAX60920.1| conserved hypothetical protein [Vibrio cholerae V52]
          Length = 398

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 81  CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 134

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 135 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 193

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 194 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 253

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 254 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 301


>gi|46203010|ref|ZP_00052227.2| COG0621: 2-methylthioadenine synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 410

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        V   + +      ++   +      +    +G    + + 
Sbjct: 139 CDHRCTFCVIPFG-RGNSRSVPVADAVAQVRRIVEHGGREVVLTGVDLTAYGRDLDAELT 197

Query: 86  PQNIALIL-----DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
              +   +     D      +   +VE       +  E           +  + L +Q+ 
Sbjct: 198 LGRLVRTILGEVPDLARLRLSSIDSVEADAALIAAFAEEPRL-------MPHVHLSLQAG 250

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H+ ++AI      R++        DLI   P +T  Q+   L       
Sbjct: 251 DDLILKRMKRRHSRADAIRICRTLRDLRPGLVFGADLIAGFPTETEAQFARSLDLVAECG 310

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + HL ++  +   GT   +M 
Sbjct: 311 LTHLHVFPYSPRPGTPAARMP 331


>gi|325978946|ref|YP_004288662.1| radical SAM protein [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178874|emb|CBZ48918.1| radical SAM protein [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 313

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  +++ + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYIAELSDRMHVTVELGLQTTYDETSKII 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H     +  +   R + P++     LI  LP +T       ++R +    +D + L+
Sbjct: 160 NRAHTYDLYVETVKRLRQLAPKVEIVSHLINGLPGETHDMMIENVRRCVTDNEIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L      V++      I   + +  
Sbjct: 220 LLHLMTSTKMQRDYHEGRLKLLGMEEYVNIICDQLEIIPKNIIIH 264


>gi|262394980|ref|YP_003286834.1| tRNA-i(6)A37 methylthiotransferase [Vibrio sp. Ex25]
 gi|262338574|gb|ACY52369.1| tRNA-i(6)A37 methylthiotransferase [Vibrio sp. Ex25]
          Length = 474

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +  +     LY L Q+I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDVSEQVKKERLYELQQTINAQAMRYS 377


>gi|121535024|ref|ZP_01666842.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
 gi|121306437|gb|EAX47361.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
          Length = 345

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 63/189 (33%), Gaps = 12/189 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR     + +  +    + + R+        +I    G  S  +  
Sbjct: 60  CKQNCLYCG----LRRDNQNLKRYRLTVEQIIDFARK-AKSYGYKTIVLQSGEDSSFDVP 114

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  I         +++ +  +        +  Y++AG +R  L +++ ++     
Sbjct: 115 TMQHIIREIK-------AMDMALTLSIGEKTREEYAAYKEAGADRYLLRIETTDKALYEA 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L    +    +  +   + +   +    +  LP QT+     ++    +   D + +   
Sbjct: 168 LDPGMSFENRMRCLRDLKELGYEVGTGCLVGLPGQTLESLADDILFFKAIDADMIGIGPF 227

Query: 208 TIEKGTLFY 216
                T   
Sbjct: 228 IPNPDTPLA 236


>gi|89256244|ref|YP_513606.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Francisella
           tularensis subsp. holarctica LVS]
 gi|167010861|ref|ZP_02275792.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Francisella tularensis
           subsp. holarctica FSC200]
 gi|254367560|ref|ZP_04983586.1| conserved hypothetical protein yleA [Francisella tularensis subsp.
           holarctica 257]
 gi|123287306|sp|Q2A3U6|MIAB_FRATH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|89144075|emb|CAJ79325.1| conserved hypothetical protein yleA [Francisella tularensis subsp.
           holarctica LVS]
 gi|134253376|gb|EBA52470.1| conserved hypothetical protein yleA [Francisella tularensis subsp.
           holarctica 257]
          Length = 442

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 210 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 267

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 268 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 327

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 328 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 357


>gi|15604281|ref|NP_220797.1| hypothetical protein RP416 [Rickettsia prowazekii str. Madrid E]
 gi|6226371|sp|Q9ZDB6|Y416_RICPR RecName: Full=Putative methylthiotransferase RP416
 gi|3860973|emb|CAA14873.1| unknown [Rickettsia prowazekii]
 gi|292572029|gb|ADE29944.1| MiaB-like tRNA modifying enzyme [Rickettsia prowazekii Rp22]
          Length = 421

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 36/271 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+   I   +  +    +    +    +   G         
Sbjct: 148 CDHNCTFC-----IIPYVRGKSRSIP--IGTIVAQVKHLVLKGFKEVVITGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L  + +   +  +     E +    E      Y +  +    + 
Sbjct: 201 LPGSPTF--AQMIKRVLKLVPELKRMRLSSIDIAEIDDELFE---LIAYSERIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 VQSGDDMILKRMKRRHNRASVIEFCQKLRAIRPEVSFGADIIAGFPTETNEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL--YNLTQSITSAHGLHAYE 252
           L   + +L ++  +  +GT   +M +    +       +    +N        H     E
Sbjct: 316 LEAELQYLHVFPYSEREGTPAARMPQVPQNIRKERAKILRQDGFNQLNEFFKRHIGQKVE 375

Query: 253 --ISNHSFLGAESLHNLNYW--RYGDYIGIG 279
             I N++       H  N+   +   Y+ IG
Sbjct: 376 LLIENNNIA-----HTENFIPVKLDKYLAIG 401


>gi|124265725|ref|YP_001019729.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Methylibium
           petroleiphilum PM1]
 gi|229890616|sp|A2SD55|MIAB_METPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|124258500|gb|ABM93494.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Methylibium petroleiphilum PM1]
          Length = 457

 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC       R +     F            Q     ++      G    +    
Sbjct: 160 CSKYCSYC--VVPYTRGEEVSRPFDDVLTEVASLADQGVKEVTLLGQNVNGYRGRMGDTA 217

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + AL+L+ +A+   ++     T  ++P+         Y +    VN + L VQ   +
Sbjct: 218 EIADFALLLEYVAEIPGIARIRYTT--SHPNEFSQRLIDVYARVPQLVNHLHLPVQHGSD 275

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + + E  ++I    A      +S D I   P +T       ++       D
Sbjct: 276 RILSAMKRGYTSLEYKSSIRKLRAIRPDISLSTDFIVGFPGETDDDHARTMKLIEDVGFD 335

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           H   +  +   GT    +H
Sbjct: 336 HSFSFIYSARPGTPAAALH 354


>gi|302874905|ref|YP_003843538.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
           743B]
 gi|307690475|ref|ZP_07632921.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
           cellulovorans 743B]
 gi|302577762|gb|ADL51774.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
           743B]
          Length = 452

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 16/219 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +  +++L           G    S    +
Sbjct: 171 CNNFCTYC-----IVPYVRGRERS-RKPEDIINEIKELVKVGYKEVTLLGQNVNSYGKGL 224

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E + + A +L  + +   +       + ++P  +  +  +   +      +I L VQ+  
Sbjct: 225 EEEIDFAKLLRLVNEIEGLERIKF--MSSHPKDLTDDVIKAIAECDKVCEQIHLPVQAGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R++   + +  +   +   P ++   DLI   P +T    E  +        
Sbjct: 283 TSLLKRMNRHYTREQYLDLVKRIKENIPNVALTTDLIIGFPGETEEDVEEVISLVKEVRY 342

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           D    +  +  KGT   ++       +        +  L
Sbjct: 343 DSAFTFLYSPRKGTPAAELPDQIPEDIKHRRFNALVDEL 381


>gi|213966835|ref|ZP_03394986.1| tRNA-i(6)A37 modification enzyme MiaB [Pseudomonas syringae pv.
           tomato T1]
 gi|301381966|ref|ZP_07230384.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058774|ref|ZP_07250315.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. tomato K40]
 gi|302135150|ref|ZP_07261140.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213928685|gb|EEB62229.1| tRNA-i(6)A37 modification enzyme MiaB [Pseudomonas syringae pv.
           tomato T1]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 68/228 (29%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F                  ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLTEVTHLAEHGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q +      V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRAVAVVDGIDRIRYTTSHPLEFSDSLIQAHADVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDAGFDFSFSFIYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|170758883|ref|YP_001788925.1| biotin synthase [Clostridium botulinum A3 str. Loch Maree]
 gi|169405872|gb|ACA54283.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 348

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 16/195 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N++  RY++ +E  +              G R+   +  GG  P  
Sbjct: 61  YCKNGCLYCGISCQNNNAERYRLSKEEILNCCSKGYSL-----GYRTF--VLQGGEDP-Y 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                   I+D +     +  +  IT+       + + ++ +  AGV+R  L  ++  E 
Sbjct: 113 YTDD---KIIDIVKSIKNLFPDCAITLSI--GEKDYDIYKKFYDAGVDRYLLRHETASEN 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L  + +       +   + I  ++    +  LP QT   +  +L          + 
Sbjct: 168 LYEKLHPDMSFENRRRCLKNLKEIGYQVGAGFMIGLPGQTNEDYVNDLIFLKELKPHMVG 227

Query: 204 LYQLTIEKGTLFYKM 218
           +      K T+    
Sbjct: 228 IGPFIPHKDTVLKNQ 242


>gi|77919231|ref|YP_357046.1| biotin synthase [Pelobacter carbinolicus DSM 2380]
 gi|77545314|gb|ABA88876.1| biotin synthase [Pelobacter carbinolicus DSM 2380]
          Length = 356

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 68/191 (35%), Gaps = 14/191 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR       +  +    +   R+       + +  GG  P  +   
Sbjct: 49  CSRNCLYCG----IRRDNQAITRYRLTADEVLDCARKAVDFGFGTLVLQGGEDPG-LSKD 103

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  ++  I     ++    +T+      V+   +  +R+AG +R  L  ++   Q   +
Sbjct: 104 FIGELISLIKSETNLA----VTLSLGERKVDE--WAAWREAGADRYLLRFETSNSQLFNY 157

Query: 148 LG--R-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +   R  H   + I+ +   +++       ++  +P QT      +++     ++D + +
Sbjct: 158 IHPPRDGHAPCDRISMLKTLQSLGYETGSGVMIGIPGQTYEDLARDIELFGELSLDMIGV 217

Query: 205 YQLTIEKGTLF 215
                   T  
Sbjct: 218 GPFIPHPQTPL 228


>gi|256752223|ref|ZP_05493087.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748875|gb|EEU61915.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 345

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++  E        ++    +        ++    G     
Sbjct: 60  CKQNCLYCGLRRDNKNIKRYRLKPE--------QIINFAKNARNLGYRTVVLQSGEDDFF 111

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I +        ++ I  +        ++ Y++AG +R  L +++ +++ 
Sbjct: 112 NVERMTKIIKSIKQL-------DVAITLSIGEKTREEYKAYKEAGADRYLLRIETTDKEL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L  N +       +   + +   +    +  LP QT+     ++        D + +
Sbjct: 165 YEKLDPNMSHENRKRCLKDLKELGYEVGTGCLIGLPGQTIESIADDILFFKEIDADMIGV 224

Query: 205 YQLTIEKGTLFYK 217
                   T    
Sbjct: 225 GPFIPNPDTPLKN 237


>gi|256545382|ref|ZP_05472745.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
 gi|256398943|gb|EEU12557.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
          Length = 432

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 77/256 (30%), Gaps = 18/256 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    + R     ++      ++ +   ++L        +  G    S  +  
Sbjct: 152 CNMYCSYC-LIPYARGNIASRD-----LVSIIDEAKRLRDNGYKEIVLTGIHVASYGKDF 205

Query: 88  NIA-LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
           ++   ++D I     +     I +    P  ++    +  +  K   +   L +QS  + 
Sbjct: 206 DLDISLIDVIEHIAKIDGIERIRLSSMEPRHIDREFLKRMKDTKKACDHFHLSLQSGSDD 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +        + L R  FP      D+I   P ++    E             
Sbjct: 266 VLKLMNRKYTTKVFKEKVDLIREYFPNAGLTTDIIVGFPNESEKNHEETKNFVKDIKFSK 325

Query: 202 LSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             L++ +   GT                 S+ ++     ++             +   + 
Sbjct: 326 THLFKYSKRDGTKAASMKNQVDGNIKKRRSKELSEIEKEISHEFLDKQIGKTLSVLFETK 385

Query: 259 L---GAESLHNLNYWR 271
               G  S ++ NY R
Sbjct: 386 TELDGYRSGYSTNYLR 401


>gi|225568730|ref|ZP_03777755.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
           15053]
 gi|225162229|gb|EEG74848.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
           15053]
          Length = 427

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +    +S L E++ + +  G + +        +  +    
Sbjct: 152 CNQFCSYC---IIPYARGRVRSRKRESVLAEVRRLAE-GGYKEVVLTGIHLSSYGVDTGD 207

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++  +++ +     +      ++E  P  V     Q             L +QS    +L
Sbjct: 208 DLLRLIEAVHGTDGIERIRLGSLE--PRIVTEEFAQALAGLPKICPHFHLSLQSGCNATL 265

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R + A E      L R  F    ++ D+I   P +T  ++E          +D + 
Sbjct: 266 KRMNRRYTAEEYFEKCELLRRYFRDPALTTDVIVGFPGETDAEFEESRAF-----IDRVD 320

Query: 204 LYQLTIEK 211
            Y+  + K
Sbjct: 321 FYETHVFK 328


>gi|160894016|ref|ZP_02074795.1| hypothetical protein CLOL250_01571 [Clostridium sp. L2-50]
 gi|156864394|gb|EDO57825.1| hypothetical protein CLOL250_01571 [Clostridium sp. L2-50]
          Length = 350

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N HV RY++ ++  +    +  +      G R+   +  GG  P  
Sbjct: 61  YCKNNCIYCGIRRDNCHVDRYRLTKDQILDCCQSGYRL-----GFRTF--VLQGGEDP-F 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I          +  I  +        ++ Y  AG  R  L  ++ ++ 
Sbjct: 113 YTDDQICEIVSEIKHQHP-----DCAITLSIGEKSREAYERYFAAGAERYLLRHETADKA 167

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  R  +    I  +H  + I  +     +   P QT+     +L        +  
Sbjct: 168 HYEKLHPREMSFDNRIRCLHDLKEIGYQTGCGFMVGSPYQTVDTLYEDLCLIKELEPEMC 227

Query: 203 SLYQLTIEKGTLFYK 217
            +     +  T F K
Sbjct: 228 GIGPFIPQADTPFGK 242


>gi|115314702|ref|YP_763425.1| 2-methylthioadenine synthetase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502304|ref|YP_001428369.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|254369234|ref|ZP_04985246.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|122325275|sp|Q0BM96|MIAB_FRATO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890539|sp|A7NBR0|MIAB_FRATF RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115129601|gb|ABI82788.1| possible 2-methylthioadenine synthetase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|156252907|gb|ABU61413.1| tRNA-I(6)A37 thiotransferase enzyme [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157122184|gb|EDO66324.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 210 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 267

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 268 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 327

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 328 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 357


>gi|56707743|ref|YP_169639.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Francisella
           tularensis subsp. tularensis SCHU S4]
 gi|110670214|ref|YP_666771.1| hypothetical protein FTF0618c [Francisella tularensis subsp.
           tularensis FSC198]
 gi|118497654|ref|YP_898704.1| tRNA-methylthiotransferase MiaB protein [Francisella tularensis
           subsp. novicida U112]
 gi|134302074|ref|YP_001122043.1| tRNA-thiotransferase enzyme MiaB [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|187931466|ref|YP_001891450.1| tRNA-methylthiotransferase MiaB protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|194323626|ref|ZP_03057402.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Francisella tularensis
           subsp. novicida FTE]
 gi|208779715|ref|ZP_03247059.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Francisella novicida FTG]
 gi|224456814|ref|ZP_03665287.1| tRNA-methylthiotransferase MiaB protein [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370246|ref|ZP_04986252.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254373019|ref|ZP_04988508.1| hypothetical protein FTCG_00593 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254374469|ref|ZP_04989950.1| hypothetical protein FTDG_00638 [Francisella novicida GA99-3548]
 gi|254874556|ref|ZP_05247266.1| tRNA-methylthiotransferase miaB [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81597746|sp|Q5NH53|MIAB_FRATT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123169487|sp|Q14IK5|MIAB_FRAT1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890540|sp|B2SG13|MIAB_FRATM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890541|sp|A0Q6T5|MIAB_FRATN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890542|sp|A4IYC1|MIAB_FRATW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56604235|emb|CAG45251.1| conserved hypothetical protein yleA [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320547|emb|CAL08634.1| conserved hypothetical protein yleA [Francisella tularensis subsp.
           tularensis FSC198]
 gi|118423560|gb|ABK89950.1| tRNA-methylthiotransferase MiaB protein [Francisella novicida U112]
 gi|134049851|gb|ABO46922.1| tRNA-thiotransferase enzyme MiaB [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568490|gb|EDN34144.1| hypothetical protein FTBG_01371 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151570746|gb|EDN36400.1| hypothetical protein FTCG_00593 [Francisella novicida GA99-3549]
 gi|151572188|gb|EDN37842.1| hypothetical protein FTDG_00638 [Francisella novicida GA99-3548]
 gi|187712375|gb|ACD30672.1| tRNA-methylthiotransferase MiaB protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|194321990|gb|EDX19472.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Francisella tularensis
           subsp. novicida FTE]
 gi|208744170|gb|EDZ90470.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Francisella novicida FTG]
 gi|254840555|gb|EET18991.1| tRNA-methylthiotransferase miaB [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158914|gb|ADA78305.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 210 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 267

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 268 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 327

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 328 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 357


>gi|52841564|ref|YP_095363.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54294222|ref|YP_126637.1| hypothetical protein lpl1287 [Legionella pneumophila str. Lens]
 gi|54297243|ref|YP_123612.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Legionella
           pneumophila str. Paris]
 gi|148358866|ref|YP_001250073.1| tRNA thiotransferase [Legionella pneumophila str. Corby]
 gi|296106913|ref|YP_003618613.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Legionella pneumophila 2300/99 Alcoy]
 gi|81368736|sp|Q5WX12|MIAB_LEGPL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81370679|sp|Q5X5N2|MIAB_LEGPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81377570|sp|Q5ZVV6|MIAB_LEGPH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890555|sp|A5IBH7|MIAB_LEGPC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|52628675|gb|AAU27416.1| tRNA thiotransferase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53751028|emb|CAH12439.1| hypothetical protein lpp1288 [Legionella pneumophila str. Paris]
 gi|53754054|emb|CAH15527.1| hypothetical protein lpl1287 [Legionella pneumophila str. Lens]
 gi|148280639|gb|ABQ54727.1| tRNA thiotransferase [Legionella pneumophila str. Corby]
 gi|295648814|gb|ADG24661.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Legionella pneumophila 2300/99 Alcoy]
          Length = 447

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 18/226 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLI 84
           C  YC F      R +     F        Q   Q  G R I+ +      + G    ++
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPFDDVLAECYQLASQ--GVREINLLGQNVNDYRG----IM 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +  +IA +   I     +     I     +P +   N    Y +     N + L VQS  
Sbjct: 211 DNGDIADLALLIHYIAAIDGIGRIRFTTSHPLAFSENLINAYAEVPELANHLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R + A E  + I   R I P +  S D+I   P +T   ++  +        
Sbjct: 271 DRILSLMKRGYTALEFKSKIRKLRKIRPDIRLSTDIIVGFPGETDKDFQDTMDLVHEIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           D    +  +   GT    +  D  + +  + + +    L  +    
Sbjct: 331 DTSFSFIYSPRPGTPAANLPDDTPMEIKKQRLQILQNRLLMNAARY 376


>gi|260885593|ref|ZP_05735307.2| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259]
 gi|260851662|gb|EEX71531.1| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259]
          Length = 524

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 64/202 (31%), Gaps = 10/202 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + + +    G + I       G       +
Sbjct: 248 CNYYCTYC---TIPLARGRSRNGTIASLVGQAEAVAA-EGGKEIVLTGVNTGDFGRSTGE 303

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +           +A +    + +QS  +  L
Sbjct: 304 TFFQLIQALDRVKGIERYRISSIE--PNLLTDEIIDFCAQSRAFMPHFHIPLQSGSDDVL 361

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R ++       I   R   P   +  D+I     +T   +E   +      +  L 
Sbjct: 362 RLMRRRYDTELFRRKIEKVRAAIPDAFIGVDVIVGTRGETDAFFEDAYKFIEDIDISRLH 421

Query: 204 LYQLTIEKGTLFYKMHKDGDLV 225
           ++  +   GT   ++    D  
Sbjct: 422 VFSYSERPGTQALQIPHVVDAQ 443


>gi|237739942|ref|ZP_04570423.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 2_1_31]
 gi|229421959|gb|EEO37006.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 2_1_31]
          Length = 435

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVNKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +L+ I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLEEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQVLRKMGRGYTKEKYLALVDKIKSKIPDVALTADIIVGFPGETEEDFLDTIDVVEKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D+  ++  +I KGT    M    D
Sbjct: 326 DNSYMFMYSIRKGTKAATMDNQID 349


>gi|167467943|ref|ZP_02332647.1| hypothetical protein YpesF_08599 [Yersinia pestis FV-1]
          Length = 321

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 10/223 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +              Q   Q     ++   ++    G     +
Sbjct: 4   CNKYCTFC--VVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAYRGATYDGD 61

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P     +    YR     V+ + L VQS  ++
Sbjct: 62  ICSFAELLRLVAAIDGIDRVRFTT--SHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDR 119

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  A I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 120 ILTMMKRAHTALEYKAIIRKLRQARPDIQISSDFIVGFPGETQQDFEQTMKLVADIHFDT 179

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  +   GT    +  +       + + +    ++Q    
Sbjct: 180 SYSFIYSPRPGTPAADLPNNVSEEEKKQRLHILQQRISQQAME 222


>gi|150401611|ref|YP_001325377.1| MiaB-like tRNA modifying enzyme [Methanococcus aeolicus Nankai-3]
 gi|150014314|gb|ABR56765.1| MiaB-like tRNA modifying enzyme [Methanococcus aeolicus Nankai-3]
          Length = 449

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 30/206 (14%)

Query: 28  CVKKCPYC----------DFN--SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           C  KC YC           +N    + + K   +N ++  L   Q        ++ +   
Sbjct: 174 CTGKCTYCIVKIARGRLASYNPDKIINKAKEFVDNGVKQMLITSQDTACYGFDKNTT--- 230

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-S 134
                P+L+    I  I          +  + +    N   +       Y+   + +   
Sbjct: 231 ----LPTLLN--EICQI------KGDFNIRIGMMHAKNVPMIIDELIDRYKDDKITKFFH 278

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIA-AIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQ 192
           L +QS ++  LR + R +   E +  A+   R I     + D+I   P +T   +   ++
Sbjct: 279 LPIQSGDDDVLRAMKREYTVDEYMDIAMEFKRKIKDLNFNTDVIVGFPTETEDNFNNTIE 338

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKM 218
                  D +   + T  KGT   ++
Sbjct: 339 LLKKLKPDAIHGAKYTQRKGTEADRL 364


>gi|50593428|gb|AAT79459.1| putative miaB protein [Agrobacterium luteum]
          Length = 445

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 26/234 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC                    + E + +    G R I+ +             
Sbjct: 158 CDKFCTYC---VVPYTRGAEISRPWADLVDEAKALVD-GGAREITLLGQNVNAWTGEDEK 213

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G        Q +  ++  + K   +       + ++P+ +       +   G  +  + L
Sbjct: 214 G------NHQGLDGLIRALDKISGLKRIRY--MTSHPNDMTEGLIAAHGDVGKLMPFLHL 265

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS  ++ L+ + R+H+    +A +   R + P ++   D I   P +T   +E  LQ 
Sbjct: 266 PVQSGSDRILKAMNRSHSVQSYLAILEKMRELRPDIALSGDFIVGFPGETDQDFEETLQI 325

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                      ++ +   GT    M       +  E +      L +   + + 
Sbjct: 326 VRDANYSQAFSFKYSPRPGTPAAGMDDQIAPEVMDERLQRLQALLNEQQYAFNQ 379


>gi|322377326|ref|ZP_08051817.1| radical SAM protein, family [Streptococcus sp. M334]
 gi|321281526|gb|EFX58535.1| radical SAM protein, family [Streptococcus sp. M334]
          Length = 315

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKVEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 99  IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYETTSDLI 158

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 159 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 218

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 219 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 262


>gi|306834121|ref|ZP_07467241.1| radical SAM protein [Streptococcus bovis ATCC 700338]
 gi|304423694|gb|EFM26840.1| radical SAM protein [Streptococcus bovis ATCC 700338]
          Length = 313

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +                  + LG+Q+  +++ + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYIAALSERMHVTVELGLQTTYDETSKII 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H     +  +   R + P++     LI  LP +T       ++R +    +D + L+
Sbjct: 160 NRAHTYDLYVETVKRLRQLAPKVEIVSHLINGLPGETHDMMIENVRRCVTDNEIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L      V++      I   + +  
Sbjct: 220 LLHLMTSTKMQRDYHEGRLKLLGMEEYVNIICDQLEIIPKNIIIH 264


>gi|282879448|ref|ZP_06288185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccalis ATCC
           35310]
 gi|281298420|gb|EFA90852.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccalis ATCC
           35310]
          Length = 497

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C   C YC     +  Y  G+E       + ++ +R L           G    S     
Sbjct: 203 CNNFCHYC-----IVPYTRGRERSRD-VESILREVRDLRDKHCKEITLLGQNVNSYCFTI 256

Query: 84  ----------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
                     I  + I            V         ++P  +  +  +   +      
Sbjct: 257 PEHLSATGETIPAETIDFPKLLRRVAHEVPGVRIRFTSSHPKDMSDDTLRVIAEEPNVCK 316

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R +     +  I+  R I P   +S D+      +T    + 
Sbjct: 317 HIHLPVQSGSNKILKLMNRKYTVEWYMDRINAIRRIIPDCGISTDMFVGYHGETEEDHQQ 376

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            L    +   D   +++ +   GT   K
Sbjct: 377 SLVLMRTVGYDSAFMFKYSERPGTYASK 404


>gi|226949295|ref|YP_002804386.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|226844306|gb|ACO86972.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
          Length = 289

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 13/233 (5%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ + 
Sbjct: 27  HNKCSFCS----MYKNEKFRVRNLEEIFEDLEESKSYY--RRINRIFLADGDALCLKTET 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL  I         V I   A +     +   +  R+ G+  + +G++S   + L  
Sbjct: 81  LKKILLKIKDTHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILED 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QTMTQWEMELQRALSY-AVDHLSLY 205
           + +     E I A   AR    + S  +I  L   +   Q   E  +ALS    D++ L 
Sbjct: 141 INKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWQQHATETGKALSLIDPDYVGLL 200

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
            L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 201 TLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|187477340|ref|YP_785364.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
           avium 197N]
 gi|123765978|sp|Q2KWE0|MIAB_BORA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115421926|emb|CAJ48446.1| putative nucleic acid binding protein [Bordetella avium 197N]
          Length = 475

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 15/194 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLI 84
           C  YC F      R +     F            Q  G R ++ +      + G      
Sbjct: 181 CSKYCSFCVVPYTRGEEVSRPFEDVLTEVADLADQ--GVREVTLLGQNVNAYRGRIEGSD 238

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + A++L+ + +   +      T  ++P  +     + Y +    V+ + L VQ+  +
Sbjct: 239 EIADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVEAYARLPKLVSFLHLPVQAGSD 296

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + +   R   P ++   D I   P +T   ++  ++       D
Sbjct: 297 RVLAAMKRGYTALEFKSVVRKLRAARPNLTLSSDFIVGFPGETEEDFQKTMKLIADVGFD 356

Query: 201 HLSLYQLTIEKGTL 214
               +  +   GT 
Sbjct: 357 TSFSFVYSRRPGTP 370


>gi|85858115|ref|YP_460317.1| tRNA 2-methylthioadenine synthetase -like protein [Syntrophus
           aciditrophicus SB]
 gi|123725210|sp|Q2LQ68|RIMO_SYNAS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|85721206|gb|ABC76149.1| tRNA 2-methylthioadenine synthetase -like protein [Syntrophus
           aciditrophicus SB]
          Length = 453

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 23/219 (10%)

Query: 15  GSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-- 71
            +     Y+     C  +C YC      R     +   I+  L E + +        I  
Sbjct: 147 STPPYSAYLKIAEGCSNRCSYC---IIPRLRGKARSRPIEDILREAEDLVDRGVRELILV 203

Query: 72  --SSIFFGG---GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
              +  +G    G P+      +AL+L  +A   T++      +   P+ +         
Sbjct: 204 AQDTTAYGRDLEGKPT------LALLLRELAGLNTLAWIR--ILYTYPTGLTDELLNVIA 255

Query: 127 KAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQ 182
                 + + + +Q +++  L  + R  ++     ++  AR + P ++    LI   P +
Sbjct: 256 NQDRICSYLDVPIQHIDDDILAAMKRRGDSHLIRNSLERARAVIPDLALRTSLITGFPGE 315

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           T  ++   +        DHL ++  + E+GT   K+ + 
Sbjct: 316 TPAKFHRLIAFVQETRFDHLGVFPYSPEEGTPAEKLPRQ 354


>gi|332975197|gb|EGK12097.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella kingae ATCC
           23330]
          Length = 440

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|289423896|ref|ZP_06425689.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289155673|gb|EFD04345.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 16/206 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I     E+  +        + +   G    S    +
Sbjct: 152 CDRYCTYC---IIPYARGRIRSRNIDEIREEIITLANNGYKEVVLT---GIHVASY--GK 203

Query: 88  NIAL---ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++     ILD I     +     I +    P            K    V    L +QS  
Sbjct: 204 DLKEDIGILDVIKAVNDIDGIERIRLSSVEPVLFTDEFIDEICKIDKLVPHFHLSLQSGT 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           + +L+ + R + A+E    +   R+    +    D+I   P +T   +   L+      +
Sbjct: 264 DSTLKRMNRRYTAAEYKRTVDTLRDRIKDVMLTTDVIVGFPGETNEDFSETLRFLKEIKL 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLV 225
            H+ +++ +  KGT    M    D  
Sbjct: 324 MHMHVFKYSPRKGTPAASMKDQVDPQ 349


>gi|187779384|ref|ZP_02995857.1| hypothetical protein CLOSPO_02980 [Clostridium sporogenes ATCC
           15579]
 gi|187773009|gb|EDU36811.1| hypothetical protein CLOSPO_02980 [Clostridium sporogenes ATCC
           15579]
          Length = 289

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 92/248 (37%), Gaps = 25/248 (10%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ 
Sbjct: 25  CSHNKCSFCS----MYKNEKFRVRNLEEIFEDLEESK--LYYRRINRIFLADGDALCLKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L
Sbjct: 79  ETLKRILVKIKETHPQCDRVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEIL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSY-AVDH 201
             + +     E I A   AR    + S  +I  L      +W+    E  +ALS    D+
Sbjct: 139 EDINKGVKVEEYIEASKKARTSGIKSSITVISGLGG--KEKWQQHAIETGKALSLIDPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + L  L +++GT   +  K G++ L      +    L             E  N +    
Sbjct: 197 VGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMKETKLM-----------LENMNVTNCIF 245

Query: 262 ESLHNLNY 269
            S H  NY
Sbjct: 246 RSNHASNY 253


>gi|28871919|ref|NP_794538.1| tRNA-i(6)A37 modification enzyme MiaB [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|81729456|sp|Q87VY1|MIAB_PSESM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|28855172|gb|AAO58233.1| tRNA-i(6)A37 modification enzyme MiaB [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|330873559|gb|EGH07708.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 68/228 (29%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F                  ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLTEVTHLAEHGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
              +      +A + D I     V     I     +P     +  Q +      V  + L
Sbjct: 206 YRGTT-HDGRVADLADLIRAVAVVDGIDRIRYTTSHPLEFSDSLIQAHADVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 325 IEDAGFDFSFSFIYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|323703565|ref|ZP_08115210.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum
           nigrificans DSM 574]
 gi|323531468|gb|EGB21362.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum
           nigrificans DSM 574]
          Length = 459

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 61/204 (29%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   ++    ++ ++ L           G    S  +  
Sbjct: 173 CNNFCTYC-----IVPYVRGRERS-RNPENIIEEIKGLVAQGYKEVTLLGQNVNSYGKDL 226

Query: 88  NIAL----ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +      +L  + K   +       + ++P   +                  L  Q+  
Sbjct: 227 QMDYRFADLLLDLDKITGLKRIRF--MTSHPRDFDQRLIDVIASTNKVCEHFHLPAQAGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  I   R       ++ D++   P +T   +   L        
Sbjct: 285 NRILKLMNRGYTREHYLQLIDNIRKAIPGASITSDIMVGFPGETEEDFADTLDLVRRVRY 344

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    +   I  GT   KM +  +
Sbjct: 345 DSAFTFVYNIRSGTPAAKMEQVPE 368


>gi|306843383|ref|ZP_07475984.1| MiaB-like tRNA modifying enzyme [Brucella sp. BO1]
 gi|306276074|gb|EFM57774.1| MiaB-like tRNA modifying enzyme [Brucella sp. BO1]
          Length = 427

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  + +  +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PGNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I       A         D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCETVRALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|293365735|ref|ZP_06612444.1| TIGR01212 family radical SAM protein [Streptococcus oralis ATCC
           35037]
 gi|307703675|ref|ZP_07640617.1| radical SAM superfamily protein [Streptococcus oralis ATCC 35037]
 gi|291316103|gb|EFE56547.1| TIGR01212 family radical SAM protein [Streptococcus oralis ATCC
           35037]
 gi|307623082|gb|EFO02077.1| radical SAM superfamily protein [Streptococcus oralis ATCC 35037]
          Length = 318

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTFEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|260438945|ref|ZP_05792761.1| radical SAM protein [Butyrivibrio crossotus DSM 2876]
 gi|292808596|gb|EFF67801.1| radical SAM protein [Butyrivibrio crossotus DSM 2876]
          Length = 306

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 31/242 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF S      +  +N I   + ++   ++  G   I+ 
Sbjct: 31  CPNRDGRIGTGGCIFCSEGGSGDFAS---SSLLSVKNQIDYGIEKIS--KKYAGDSYIA- 84

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
            +F   T +      +  I     ++  +     ++I   P  +E +  +   +   NRI
Sbjct: 85  -YFQAFTNTYAPVDRLKKIFTEAIQDNRI---CGLSIATRPDCLEDDKIELLAEL--NRI 138

Query: 134 -----SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE 188
                 LG+Q++ E + R++ R +  +    A+     +   +   +I  LP +      
Sbjct: 139 KPVWIELGLQTINETTARYIRRGYPLAVFEDAVARLNAVDIPVVVHVIVGLPGENANDNL 198

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              +      ++ + +  L I K T     +        S    V        I   H +
Sbjct: 199 ACAKYLSHLNINGVKIQLLHILKNTDLADDYYSSKFKELSLAEYVKTVVDMIEILPPHFV 258

Query: 249 HA 250
             
Sbjct: 259 IH 260


>gi|255002985|ref|ZP_05277949.1| 2-methylthioadenine synthetase (miaB) [Anaplasma marginale str.
           Puerto Rico]
          Length = 425

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S  +  +V     C K C +C     V  Y  G E + +S    +  +R+L    +   +
Sbjct: 142 SRGVSAFVSVQEGCDKFCTFC-----VVPYTRGPE-YSRSVEDVLAEVRKLADGGTKEVV 195

Query: 75  FFGGGTPSL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             G    +          ++  ++  +A+   +      T  ++P  +  + +  ++   
Sbjct: 196 LLGQNVNAYHGTYKGNEWDLGRLIRKVAEVDGIERIRYTT--SHPKDMHSSLYDAHKHEP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
             +  + L VQS  +  LR + R H+  E +  I   +     +  S D I   P +T  
Sbjct: 254 KLLPCVHLPVQSGSDSVLRKMNRKHSVQEYMDIIDTLKEARSDIALSSDFIVGFPGETEE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            +E  +             ++ +   GT 
Sbjct: 314 DFEATMNLVRHVGFATSYSFKYSPRPGTP 342


>gi|157413867|ref|YP_001484733.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Prochlorococcus marinus str. MIT 9215]
 gi|229890599|sp|A8G6B6|MIAB_PROM2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157388442|gb|ABV51147.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9215]
          Length = 464

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 70/235 (29%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  +  +  +E+Q +      + I+ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPDAIKSEIQKLAN-DNFKEITLLGQNIDAYGRDLPG 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     I     +P        Q   +         +  Q
Sbjct: 226 TTKEGRKENTLTDLLYYIHDVEGIRRIRFATSHPRYFSRRLIQACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +   +    I   R++ P  S   D I A P ++  Q+   L+    
Sbjct: 286 SGNNEILKLMARGYTIDKYKRIIENIRSLMPNASITADAIVAFPGESEEQYRDTLKLISD 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D +     +    T          +    +   +   N     TS      Y
Sbjct: 346 IGFDQVMTAAYSPRPNTP--AALWHNQISEEVKKERLKEINELVETTSKQRNERY 398


>gi|238791657|ref|ZP_04635295.1| hypothetical protein yinte0001_28150 [Yersinia intermedia ATCC
           29909]
 gi|238729273|gb|EEQ20789.1| hypothetical protein yinte0001_28150 [Yersinia intermedia ATCC
           29909]
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 70/226 (30%), Gaps = 16/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F                  L E+  +    G R +     ++    G  + 
Sbjct: 157 CNK---YCTFCVVPYTRGEEISRPSDDILFEIAQLASQ-GVREVNLLGQNVNAYRGA-TY 211

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               +I    + +     +     I     +P     +    YR     V+ + L VQS 
Sbjct: 212 --DGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   +E  ++      
Sbjct: 270 SDRILTMMKRAHTALEYKSIIRKLRQARPDIQISSDFIIGFPGETQQDFEQTIKLVADIH 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            D    +  +   GT    +  D       + + +    +TQ    
Sbjct: 330 FDTSYSFIYSPRPGTPAADLPDDVSEEEKKQRLHILQQRITQQAME 375


>gi|328675997|gb|AEB28672.1| tRNA-i(6)A37 methylthiotransferase [Francisella cf. novicida 3523]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 210 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 267

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 268 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 327

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 328 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 357


>gi|325266776|ref|ZP_08133449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella denitrificans
           ATCC 33394]
 gi|324981778|gb|EGC17417.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella denitrificans
           ATCC 33394]
          Length = 441

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQ-GVKEINLLGQNVNAYRGE----ME 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|296447885|ref|ZP_06889796.1| RNA modification enzyme, MiaB family [Methylosinus trichosporium
           OB3b]
 gi|296254626|gb|EFH01742.1| RNA modification enzyme, MiaB family [Methylosinus trichosporium
           OB3b]
          Length = 437

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 6/165 (3%)

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQ 143
           P  +  +L  +++   V+     T  ++P  ++      +    +    + L VQS   +
Sbjct: 205 PATLPRLLARLSRIEGVTRLRYTT--SHPIDMDQELIDAHASLPMLAPFVHLPVQSGSNR 262

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R H+A   +  +   R   P +  S D I   P +T   +E  L    +     
Sbjct: 263 VLRAMNRRHDADFYLDIVARLRAARPDIALSSDFIVGFPGETDADFEATLALIRAVGFAS 322

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              ++ +   GT   +        + SE +A     L Q   + +
Sbjct: 323 SFSFKYSPRPGTPGAERDDQIAEDVKSERLAALQALLEQQRQAFN 367


>gi|325288750|ref|YP_004264931.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324964151|gb|ADY54930.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 602

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 73/192 (38%), Gaps = 17/192 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C F+    +Y   ++  + S  TE+ +   L    +I+++            +
Sbjct: 208 CPYNCTFC-FHPSGSKY---RQRSLDSVFTELDY---LISNYTINNLAI--------TDE 252

Query: 88  NIALILDGIAKNWTV--SSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             A   +  A+        N+   +      V        R +G   ++LG++S + + L
Sbjct: 253 LFARNFEYAAEFCKRIKQYNIGWIVSLRVDIVSKELATMLRDSGCLSVNLGLESADNRIL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + +N    +   A+ +   +      + I+   ++T+      ++   ++    + L+
Sbjct: 313 KSMRKNITIEQIDNALSILYEVGLNAQGNFIFGDLEETLETASNTIRWWEAHPQYQIHLH 372

Query: 206 QLTIEKGTLFYK 217
            + +  G+  YK
Sbjct: 373 WIVVYPGSYLYK 384


>gi|320157147|ref|YP_004189526.1| tRNA-i(6)A37 methylthiotransferase [Vibrio vulnificus MO6-24/O]
 gi|319932459|gb|ADV87323.1| tRNA-i(6)A37 methylthiotransferase [Vibrio vulnificus MO6-24/O]
          Length = 461

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 144 CSKYCTYC---VVPYTRGEEVSRPMDDVLYEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 197

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 198 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P +  S D I   P ++   ++  ++       
Sbjct: 258 DRILTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGESDKDFQDTMKLIKDVDF 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    L  E     LY L Q I +    ++
Sbjct: 318 DMSFSFIFSPRPGTPAA----DYPCDLSEETKKERLYELQQQINAQAMRYS 364


>gi|319936488|ref|ZP_08010904.1| tRNA 2-methylthioadenine synthetase [Coprobacillus sp. 29_1]
 gi|319808603|gb|EFW05155.1| tRNA 2-methylthioadenine synthetase [Coprobacillus sp. 29_1]
          Length = 480

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 87/269 (32%), Gaps = 27/269 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC     V   +  + + +++    ++ + +L           G    S     
Sbjct: 199 CNKFCTYC----IVPYTRGKERSRLKN--EIIEEVNELKAQGYQEITLLGQNVNSYGKDF 252

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +       L        +      T  ++P     +      +    +  I L VQS   
Sbjct: 253 DDGYNFASLLADVAQTGIPRIRFTT--SHPWDFTDDMIDTIAQYDNIMPAIHLPVQSGNS 310

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR ++  + +      +   P  +   D+I   P +T  Q+E  +        D
Sbjct: 311 EVLKRMGRRYSREQYLELFDKIKTKIPDCTITTDIIVGFPGETDEQFEDTITLYEHCEYD 370

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS------ 254
               +  +   GT   KM  D D+    + +      + +     +  +  E+       
Sbjct: 371 LAYTFIYSPRAGTPAAKMEDDIDIHTKEQRLYRLNDLVNEKALKQNQKYLDEVVEVLVEG 430

Query: 255 ----NHSFLGAESLHN--LNYWRYGDYIG 277
               + + L   + H   +N+    D+IG
Sbjct: 431 TSKKDDNMLTGYTRHQKLINFKGNQDHIG 459


>gi|148270069|ref|YP_001244529.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga petrophila RKU-1]
 gi|238064961|sp|A5IL80|RIMO_THEP1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|147735613|gb|ABQ46953.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga petrophila RKU-1]
          Length = 430

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 36/240 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--------QENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C   S     +           E+ ++    E+  + Q T    I        
Sbjct: 148 CDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQAL 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                 P  +  +     + W         +  +P  +         +    V    + V
Sbjct: 208 ------PDLLRRLNSLNGEFWIR------VMYLHPDHLTEEIISAMLELDKVVKYFDVPV 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR  ++ E    +   R  FP       +I   P +T   +E   Q   
Sbjct: 256 QHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D L  +  + E+GT+ + + +  D              + +       L   EISN
Sbjct: 316 EIQFDKLGAFVYSDEEGTVAFNLKEKVDP------------EMAKRRQEELLLLQAEISN 363


>gi|310658531|ref|YP_003936252.1| isopentenyl-adenosine a37 tRNA methylthiolase [Clostridium
           sticklandii DSM 519]
 gi|308825309|emb|CBH21347.1| isopentenyl-adenosine A37 tRNA methylthiolase [Clostridium
           sticklandii]
          Length = 477

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 66/204 (32%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   ++    +  ++ L           G    S     
Sbjct: 195 CNNFCTYC-----IVPYTRGRERS-RNPEDVINEVKDLARNGVKEITLLGQNVNSYGNDF 248

Query: 88  N----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +     A +L  +     +       + ++P  +                 I L VQS  
Sbjct: 249 DNKVSFAKLLTMLNDIQGIERIRF--MTSHPKDISEELIDAVANLDKVCESIHLPVQSGS 306

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R++   + I  I+  +   P ++   D++   P +T   +   L        
Sbjct: 307 TAVLKKMNRHYTKDQYIELINKIKTKVPNVALTTDIMVGFPGETEEDFLDTLDVLEKVQY 366

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D   ++  ++ KGT+   M    D
Sbjct: 367 DSAFMFIYSVRKGTVAENMDNHID 390


>gi|260592003|ref|ZP_05857461.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella veroralis
           F0319]
 gi|260536287|gb|EEX18904.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella veroralis
           F0319]
          Length = 450

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   + S L E++      G + ++    ++   G  P+ 
Sbjct: 163 CNNFCHYC---IVPFTRGRERSRDVDSILKEVK-DLHDKGFKEVTLLGQNVNSYGLLPNG 218

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + + K      ++ +     NP  +  +  +         N I    QS 
Sbjct: 219 KRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIIKAVASEPNLCNHIHFPAQSG 278

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + LR + R +   + +  +   R + P      D+      +T   ++  L       
Sbjct: 279 SNEVLRLMNRKYTREDYLRKVDTIRRLIPDCGLTTDIFIGYHNETEADYQETLSLMREVG 338

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   K
Sbjct: 339 FDSAFMFKYSERPGTYAAK 357


>gi|283795928|ref|ZP_06345081.1| radical SAM protein [Clostridium sp. M62/1]
 gi|291076566|gb|EFE13930.1| radical SAM protein [Clostridium sp. M62/1]
          Length = 345

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 49/274 (17%)

Query: 28  CVKK--------CPYC------DFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           C  +        C +C      DF        +       Q+  ++++  ++    +   
Sbjct: 39  CPNRDGTLGTGGCIFCSEGGSGDFAQKAGPGLRQDGPELTQAVFSQIEQAKERVSAKIKD 98

Query: 73  S---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
                +F   T +      +  +      +  V +   ++I   P  +         +  
Sbjct: 99  GKYIAYFQSYTNTYAPVSYLERLFSAALSHPDVEA---LSIGTRPDCLSGETVALLSRLN 155

Query: 130 VNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
             +   + LG+Q++ E++ R + R +     + A    +     +   +I  LP ++ + 
Sbjct: 156 QIKPVWVELGLQTIHEKTARLIRRGYELPCFLDAFERLKTAGLSVIVHVILGLPGESRSD 215

Query: 187 WEMELQRALSYA------------------------VDHLSLYQLTIEKGTLFYKMHKDG 222
               ++   S                          +D + L  L I KGT   ++++  
Sbjct: 216 MLETVRFLGSLRAGGLQTPSLPAGSALSAEAPGTDHIDGIKLQLLHILKGTELARLYERE 275

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +      V L      +     +    IS  
Sbjct: 276 SFPVMEPEEYVSLIADCIRLLPQDIVIH-RISGD 308


>gi|83594877|ref|YP_428629.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodospirillum rubrum ATCC 11170]
 gi|83577791|gb|ABC24342.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodospirillum rubrum ATCC 11170]
          Length = 535

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 24/210 (11%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      R Y+V     +   + E++ + +  G  
Sbjct: 186 YIYIPLGVPVATPNMARGCPFTCSFCSQWKFWRDYRVRDPKKV---VDEIEILVRQHG-- 240

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRK 127
            +         P++    N    ++   +       V   I    + +  + +    YRK
Sbjct: 241 -VGFFILADEEPTI----NRNKFVEFCEELIRRDLGVMWGINTRVTDIMRDEDLLPLYRK 295

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  ISLG ++  + +L    +    ++   AI L R          I  L  +T    
Sbjct: 296 AGLIHISLGTEAAAQLNLDIFHKETTVAQNKRAIELLRKHGIVTEAQFIVGLENETAETL 355

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           E   +  + +  D  +    T    +  + 
Sbjct: 356 EETYKMCMDWNPDMANWSMFTPWPFSDLFH 385


>gi|330991809|ref|ZP_08315758.1| Putative methyltransferase [Gluconacetobacter sp. SXCC-1]
 gi|329760830|gb|EGG77325.1| Putative methyltransferase [Gluconacetobacter sp. SXCC-1]
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 61/191 (31%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  +   +    +    E++  +Q               T  L   +
Sbjct: 207 CKSRCTFCLWPQTVGGHH-YRTRSPEHVAAEIRLAKQYFPQVKEFFFDDDTFTDDLPRAE 265

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  +  G+  + +G +S  +Q L  
Sbjct: 266 AIAKELGKLGVTWSCNAKA---------NVPRKTLEVLKANGLRLLLVGYESGNQQILHN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T    +  ++ A       L +   
Sbjct: 317 IKKGMRVETAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFATEINPHTLQVSLA 376

Query: 208 TIEKGTLFYKM 218
               GT  +K 
Sbjct: 377 APYPGTFLHKQ 387


>gi|225573635|ref|ZP_03782390.1| hypothetical protein RUMHYD_01829 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039003|gb|EEG49249.1| hypothetical protein RUMHYD_01829 [Blautia hydrogenotrophica DSM
           10507]
          Length = 445

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 17/223 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSL 83
           C K C YC     +   +    ++ ++  L + + M Q      I         G    L
Sbjct: 154 CDKHCTYC----IIPSLRGKFRSYPMERLLKQAEKMAQQGVRELILVAQETTLYGTD--L 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +++  +L+ + K   +       +   P  +     +   +     + + L +Q   
Sbjct: 208 YGKKSLHRLLEELCKITGIYWIR--VLYCYPEEIYPELVEVIAREPKVCHYLDLPIQHAS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ +GR  +  + +  +   R   P +     LI   P +T    E  ++   +   
Sbjct: 266 DRILKRMGRRTSKKQLVEIVRTLREKIPDIVLRTTLITGFPGETQEDHEELMEFVDTMEF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           D L ++  + E+ T    M       +  E+   +L  L Q I
Sbjct: 326 DRLGVFTYSPEENTPAAVMKAQISEEI-KEDRKAELMELQQEI 367


>gi|118591328|ref|ZP_01548726.1| hypothetical protein SIAM614_26813 [Stappia aggregata IAM 12614]
 gi|118436000|gb|EAV42643.1| hypothetical protein SIAM614_26813 [Stappia aggregata IAM 12614]
          Length = 422

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 72/207 (34%), Gaps = 27/207 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C  +C +C     +  Y  G    +   +  +  +++L G      +  G    S     
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPMGV-VIDQIKRLVGNGYNEIVLTGVDITSYGADL 199

Query: 84  --------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
                   +  + + ++ +      +   ++E   +      E           +  + L
Sbjct: 200 PGTPKLGTLSAKILKMVPELKRLRLSSIDSIEADDDLMRVIAEDERL-------MPHLHL 252

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            +Q+ ++  L+ + R H  ++ I      R + P      D+I   P +T   ++  L+ 
Sbjct: 253 SLQAGDDMILKRMKRRHLRADTIRFCEEVRRLRPDMVFGADIIAGFPTETEEMFQNSLRI 312

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                + HL ++  +  KGT   +M +
Sbjct: 313 VDECDLTHLHVFPFSPRKGTPAARMPQ 339


>gi|16081399|ref|NP_393736.1| hypothetical protein Ta0256 [Thermoplasma acidophilum DSM 1728]
 gi|10639399|emb|CAC11401.1| hypothetical protein [Thermoplasma acidophilum]
          Length = 401

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 73/226 (32%), Gaps = 18/226 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C  KC +C   SH+ R K+      +  + +++ M           I       
Sbjct: 117 IPINQGCTGKCNFC--ISHIARGKL-VSRRPEKIVNQIRMMVAAGK----REIRISSLDT 169

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLG 136
           +         +   I     V  +  + +        +       +A         + + 
Sbjct: 170 AAYGKDTGYRLPSLIKDITAVDGDFMLRVGMMEPRNTIEILDDLLEAYDDPKVFKFLHIP 229

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRA 194
           VQS +++ L  + R +   E +  I   R  FP   +S D+I     +    +++     
Sbjct: 230 VQSGDDRVLTAMNREYTVDEFMQIIESFRKRFPDMTISTDVIIGYHAENDRSFDLTCDLI 289

Query: 195 LSYAVDHLSLYQLTIEKGTL-FYKMHKDGDLVLPSENVAVDLYNLT 239
                + +++ + +  + T  F    +  +++   +    +++   
Sbjct: 290 RKVQPEIINVTRFSPRELTPDFEHRPRPTNVLKDQDRTMAEIHRKI 335


>gi|224003997|ref|XP_002291670.1| hypothetical protein THAPSDRAFT_41246 [Thalassiosira pseudonana
           CCMP1335]
 gi|220973446|gb|EED91777.1| hypothetical protein THAPSDRAFT_41246 [Thalassiosira pseudonana
           CCMP1335]
          Length = 453

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 68/231 (29%), Gaps = 11/231 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC          V Q   +++ L   +Q         ++           +   
Sbjct: 167 CNEHCTYC---VVPSVRGVEQSRSMEAILQECVQLAASGYKEVTLLGQNIDAYGRDMTPR 223

Query: 87  QNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +  A +L  +  N    +   I  + ++P                      +  Q+ ++Q
Sbjct: 224 RTFADLLHYLNDNLPPDTISRIRYVTSHPRYFSDRVIDAVADLDKVCECFHMPFQAGDDQ 283

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R +  +  +  I    A+     +  D+I   P +T   ++  L        D+
Sbjct: 284 VLRDMRRGYTYASYMNIIKKIRAKAPDASICGDIIVGFPNETDEAFQRTLDLMEEVKFDN 343

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           L+ +  +    T            + SE +        +          YE
Sbjct: 344 LNTFAYSPRPNTEAANWENQIPPDVQSERLQRVQALAAKHALERSQ--RYE 392


>gi|317471887|ref|ZP_07931222.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
 gi|316900660|gb|EFV22639.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
          Length = 439

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 76/224 (33%), Gaps = 15/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC            +   ++  L+E++ + +      + + I        L   
Sbjct: 157 CNQFCSYC---IIPYARGRVRSRDMEDVLSEIRGLARNGCREFVITGIHVCSYGTDLDGD 213

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           + +  +L+ I K   V      ++E  P  +  +  +  +  +       L +QS  + +
Sbjct: 214 KGLIDLLEEIGKVGGVDRIRLGSLE--PGIITEDFVKRLQSIEQFCPHFHLSLQSGCDAT 271

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E      + R  +    ++ D+I   P +T  ++E   +          
Sbjct: 272 LKRMNRKYTTDEIREKAEILRKAYEDPALTTDIIVGFPGETEEEFEATRKFLEEIG---- 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            LY++ + K +              ++        +  ++   H
Sbjct: 328 -LYEMHVFKYSKRAGTRAAVMEDQVNDQEKARRSAVLIAMNEEH 370


>gi|317056861|ref|YP_004105328.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7]
 gi|315449130|gb|ADU22694.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7]
          Length = 443

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 91/278 (32%), Gaps = 28/278 (10%)

Query: 15  GSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
            +     Y+     C   C YC   +   +++  +   ++  L E +W+ +      ++ 
Sbjct: 142 STEPFFAYIKIAEGCSNCCTYCAIPAIRGKFRSRK---MEDILEEAKWLAEHG----VTE 194

Query: 74  IFFGGGTPS-----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-- 126
           +       +     L     +  +L  + +          T+ + P  +           
Sbjct: 195 LVVIAQDTTRYGEDLYGKSMLPELLKKLCEIDGFKWIR--TLYSYPERISDEFIDVLASE 252

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTM 184
           +  V  I + +Q    + L+ + R  + +  +  I   R   P +     LI   P +T 
Sbjct: 253 EKLVKYIDMPIQHCNAEILKRMNRVGSEAYLLELIQKLRARIPDIVLRTTLIAGFPGETE 312

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            Q+E   +   +   + L  +  + E+GT  Y M    D    +    + +      +  
Sbjct: 313 AQFEELCEFVKNVGFERLGCFAYSPEEGTKAYSMPDQVDEQTRNRRADIIMQE---QMLV 369

Query: 245 AHGLHAYEISNHSFLGAESLHNLNYWRYGDYIGIGPGA 282
           A   +  ++     +  E      + RY +    G GA
Sbjct: 370 ADRYNQAQLGKTVEIVCE-----GFDRYAECY-FGRGA 401


>gi|290953586|ref|ZP_06558207.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295313087|ref|ZP_06803777.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Francisella
           tularensis subsp. holarctica URFT1]
          Length = 427

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 137 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 194

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 195 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 252

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 253 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 312

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 313 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 342


>gi|317152020|ref|YP_004120068.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|317152309|ref|YP_004120357.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942271|gb|ADU61322.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316942560|gb|ADU61611.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 332

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 64/189 (33%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +R        +       ++ +      R+ + +   G  PS    +
Sbjct: 46  CNKHCRYCG----LRADNRTLRRYRMRAYHILETVAAAVDQRAGTVVLQSGDDPSY-TAE 100

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  ++  I     V+      +  +     ++ +  +R+ G +R  L +++ +    + 
Sbjct: 101 YIGELVRQIKARHDVA------VTLSLGDRGLDEYAYWRECGADRCLLKLETTDPARYKQ 154

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  + S  +  +   R +   +   +I  LP  T      ++       +D +++   
Sbjct: 155 LRQGEDFSARLHRVEELRRMGYEVGSGVIAGLPGTTPVDALRDILFLTDLGLDMIAVGPF 214

Query: 208 TIEKGTLFY 216
                T   
Sbjct: 215 VPNPDTPMA 223


>gi|219853312|ref|YP_002467744.1| MiaB-like tRNA modifying enzyme [Methanosphaerula palustris E1-9c]
 gi|219547571|gb|ACL18021.1| MiaB-like tRNA modifying enzyme [Methanosphaerula palustris E1-9c]
          Length = 420

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC      R  +   ++F      ++    Q         +   G   S     
Sbjct: 143 CAGRCSYC----ITRNARGPLQSFQP---PDIYNRVQQAVDNGAVEVQLTGQDLSSWGLD 195

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEV---NNFQGYRKAG-VNRISLGVQSLEE 142
               + D +        +  + +   NP++V     +    Y+       + L +QS  +
Sbjct: 196 LGRSLPDLLRGITAFPGDYRLRLGMMNPATVLPILDDLIAAYQSDRIFQFLHLPIQSGSD 255

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R++ AS+    +   R + P ++   DLI   P +T   +E  LQ   + + +
Sbjct: 256 RVLAAMNRSYTASDVQQILRAFREVHPDLTLMTDLIVGFPGETDQDFEETLQMITALSPN 315

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            +++ + +   GT    +    D
Sbjct: 316 KVNMTRYSGRPGTPAADLPDLQD 338


>gi|187251699|ref|YP_001876181.1| MiaB family RNA modification enzyme [Elusimicrobium minutum Pei191]
 gi|186971859|gb|ACC98844.1| RNA modification enzyme, MiaB family [Elusimicrobium minutum
           Pei191]
          Length = 409

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 77/202 (38%), Gaps = 18/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC                I S + E+ + + +      ++ I  G    + + P
Sbjct: 133 CDNFCSYC---IIPFARNKKLSKPIPSTVNEIKELISKGFKEIVLTGINIG----NYLCP 185

Query: 87  Q---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSL 140
           Q   ++A++L  I K          +IE N  +V  +     ++ G    N   + +QS 
Sbjct: 186 QTGADLAVLLKEIFKIEGEYRIRFSSIELN--TVTDSLLAAAKEGGSKFCNYFHIPLQSG 243

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R +   +    I   + +FP +    D+I   P +T  ++E         A
Sbjct: 244 SDLVLKDMNRRYLTKDYAKRIGEIKAMFPGIGIYADIIAGYPVETEEEFEKSYNFIKEVA 303

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           ++ L ++  ++  GT    + +
Sbjct: 304 LNGLHVFSYSVRPGTKAANLPQ 325


>gi|154248939|ref|YP_001409764.1| biotin synthase [Fervidobacterium nodosum Rt17-B1]
 gi|154152875|gb|ABS60107.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 349

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 18/195 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC     N ++ RY++ +E      L   + + +L     +          + 
Sbjct: 55  YCSQHCLYCGLRAENRNLNRYRMTEEE----ILERARLIAKLGIKTIVLQSGEDPYYTT- 109

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + I+ ++  I K      +V IT+       E      +++ G +R  +  ++   +
Sbjct: 110 ---ERISYLITEIKKL-----DVAITLSIGERDFEEYKI--WKELGADRYLMRHETASPE 159

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L    +     A +   + +        +  LP QT     ++L        D + 
Sbjct: 160 LYAKLHPGDSFENRKAHLFELKRLGYETGAGCMVGLPGQTPYDMALDLAFLKELDADMIG 219

Query: 204 LYQLTIEKGTLFYKM 218
           +        T     
Sbjct: 220 IGPFIPNPDTPLANQ 234


>gi|296269109|ref|YP_003651741.1| RNA modification enzyme, MiaB family [Thermobispora bispora DSM
           43833]
 gi|296091896|gb|ADG87848.1| RNA modification enzyme, MiaB family [Thermobispora bispora DSM
           43833]
          Length = 498

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  + +  +     +  +R L     I     G    +     
Sbjct: 166 CNNTCTFC----IVPSLRGKERD--RRPGDILSEIRALVAEGVIEVTLLGQNVNTYGVEF 219

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   + +L    +   +          +P++   +      +    +  + + +QS  
Sbjct: 220 GDRQAFSKLLRACGEIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMPSLHMPLQSGS 277

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R++ A   +  +   R   P   +S D+I   P +T   ++   +       
Sbjct: 278 DRILRAMRRSYRAERFLGILERVRAAIPDAAISTDIIVGFPGETEEDFQRTCEVVREARF 337

Query: 200 DHLSLYQLTIEKGTLFYKM 218
            H   +Q +I  GT    M
Sbjct: 338 AHAFTFQYSIRPGTPAAAM 356


>gi|295085090|emb|CBK66613.1| Biotin synthase and related enzymes [Bacteroides xylanisolvens
           XB1A]
          Length = 348

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 67/193 (34%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  +  + +   RQ       + +  GG  P  +   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLNLESILDCCRQGYKLGFRTFVLQGGEDP-ALTDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +  I +N+      +  I  +      + ++ + +AG NR  L  ++  E   R 
Sbjct: 117 RIEMTVARIRQNYP-----DCAITLSLGEKSRDAYERFFRAGANRYLLRHETHNESHYRQ 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +  + +  +   ++I  +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPAEMSGKQRLQCLADLKDIGYQTGTGIMVGSPGQTVEHIIEDILFIEKLQPEMIGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T F +  
Sbjct: 232 FLPHHDTPFAQYP 244


>gi|297544628|ref|YP_003676930.1| MiaB family RNA modification protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842403|gb|ADH60919.1| RNA modification enzyme, MiaB family [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 471

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
             +  +  ++L  +V+  + C   C YC     +  Y  G+E   +     +  +++L  
Sbjct: 166 EELPVKRDSNLKAWVNIIYGCNNFCTYC-----IVPYTRGREKS-RKPEDIVAEVKELAQ 219

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQ 123
                    G    S    +++   +      + ++    I     + ++P  +      
Sbjct: 220 KGYKEITLLGQNVNSY--GKDLDENITFAKLLYKLNEIEGIERIRFMTSHPKDISDELIY 277

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             R        + L VQ+   + L+ + R +     +  I   R+  P ++   D+I   
Sbjct: 278 AMRDLNKVCEHLHLPVQAGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGF 337

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           P +T   +   L        D    +  +   GT+   M    D  +  E +  
Sbjct: 338 PGETEEDFLETLDLVQRVRFDAAYTFIYSKRAGTVAANMPDQVDDAVKHERLER 391


>gi|297581341|ref|ZP_06943265.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534657|gb|EFH73494.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 211 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 330 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 377


>gi|332559404|ref|ZP_08413726.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides WS8N]
 gi|332277116|gb|EGJ22431.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides WS8N]
          Length = 425

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 21/226 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G    + + +  ++ +R+L   R  + +   G   +     
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIRRLV-DRGFAEVVLTGVDLTSWGAD 198

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN------RISLGVQS 139
                 + D + +   +  ++     ++  S+E +  +    A          + L +Q 
Sbjct: 199 LPAAPRLGDLVMRILRLVPDLARLRISSIDSIEAD--EALMGAIATEPRLMPHLHLSLQH 256

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   +AI     AR + P + F  D+I   P +T   +   L+     
Sbjct: 257 GDDLILKRMKRRHLRDDAIRFCEEARRLRPDIVFGADIIAGFPTETEAAFANSLKLVEEC 316

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +  L ++  +  +GT   +M +           A  L  L ++  
Sbjct: 317 GLTFLHVFPFSPRQGTPAARMPQL--AGPVIRERAAQLRTLGEARL 360


>gi|302670644|ref|YP_003830604.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
 gi|302395117|gb|ADL34022.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
          Length = 451

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC      +     +   ++  L + + + +      +         G    L 
Sbjct: 158 CDKHCTYC---IIPKVRGAYRSVPMEQLLADARNLAEAGVTELLLVAQETTLYGTD--LY 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             + +  +L  + +           +   P  +     Q  +      + + + +QS  +
Sbjct: 213 GEKKLPELLHKLCEIDGFKWIR--ILYCYPEEITEELIQTIKTEPKICHYLDIPIQSGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  N +E  A +   R   P +     LI   P +T        +       D
Sbjct: 271 RILKLMGRRTNNAEIRALVEHLREEIPDICIRTTLISGFPGETAADHNETFKLVEDLRFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            L ++  + E+ T    M   
Sbjct: 331 RLGVFTYSQEEDTPAATMPDQ 351


>gi|291550943|emb|CBL27205.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
           torques L2-14]
          Length = 440

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 76/227 (33%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S      + +  +  +  + E+  + Q             G 
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMERLLKEAQDLAEQGVKELILVAQ--------ETTLYGK 205

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   +++  +L  + K   +       +   P  +     Q  ++     + + L +
Sbjct: 206 D--LYGEKSLPKLLRELCKISGIRWIR--ILYCYPEEITDELIQVMKEESKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  +  E I  +   R   P +     LI   P +T  Q E  ++   
Sbjct: 262 QHANDTILKRMGRRTSKQELIDIVQKLRKEIPDICLRTTLITGFPGETQEQHEEVMEFID 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +   D L  +  + E+ T         D     E+   D+  L Q I
Sbjct: 322 TLEFDRLGAFTYSPEEDTPAATFEDQID-EEVKEDRQADIMELQQEI 367


>gi|282857097|ref|ZP_06266343.1| coproporphyrinogen dehydrogenase [Pyramidobacter piscolens W5455]
 gi|282585032|gb|EFB90354.1| coproporphyrinogen dehydrogenase [Pyramidobacter piscolens W5455]
          Length = 336

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 17/223 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +CD N H   Y+      I+  + +++++      R +      GG P  +  + + 
Sbjct: 65  RCLFCDLN-HGLAYRELSCPEIRDKVGKLRFL-HKYDRRPVRRCLLSGGNPFFLPAEKLL 122

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSL-- 145
            I               ++  A    V        +    AG +R+ LG++S  E+ L  
Sbjct: 123 WI--AGELRGAFPECESVSCFARADDVMKKSAEELETLHAAGYDRLCLGIESGSERVLRY 180

Query: 146 --RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDH 201
             + +GR  NA     A+          S  +I  L  +  +                  
Sbjct: 181 HEKGVGRAGNAE----AMRKLDAAGISYSVYVILGLGGRALSDEHIAETASLLNGARPFE 236

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           L++  L + +G    +  + G+        A+       S+  
Sbjct: 237 LTVVNLVLFRGARLAERVRAGEFKRLRPLEALGEGRRLLSLLE 279


>gi|222055382|ref|YP_002537744.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. FRC-32]
 gi|221564671|gb|ACM20643.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Geobacter sp. FRC-32]
          Length = 476

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC YC     F+    R +  +  + +  +  +  +  + G + IS           
Sbjct: 206 CPSKCIYCLWPQTFSGRAMRVRSAENVYQE--VKWI--VENVPGVKEIS----------- 250

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +        +           + I+   N   + +    +  R AG+  + +G ++  E
Sbjct: 251 FDDDTFTANREHARAVAEKLKPLGISWTINARANCDYETLRIMRDAGLRHVVVGFETGNE 310

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           Q L+ + +    ++AI      + +   +    I  LP +T       ++ A +  ++ +
Sbjct: 311 QILKNIKKGVTKAQAIEFTRNCKKLGLSVHGAFIMGLPGETRETIRETIEYAKALDLNSI 370

Query: 203 SLYQLTIEKGTLFYKM 218
                +   GT FY +
Sbjct: 371 QASLASPYPGTEFYDL 386


>gi|29347245|ref|NP_810748.1| biotin synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|29339144|gb|AAO76942.1| biotin synthase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 345

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 69/191 (36%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S    +   +Q  G    + +  GG  P  +  +
Sbjct: 62  CRNNCYYCG----IRKGNPNLERYRLSTENILNCCKQGYGLGFRTFVLQGGEDP-ALTEE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  I+  I +++      +  I  +        ++ + +AG NR  L  ++ +++  + 
Sbjct: 117 RIEDIVSTIRRSYP-----DCAITLSLGEKSREAYERFFQAGANRYLLRHETYDKEHYQQ 171

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   ++I  +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPAGMSCEHRLQCLRDLKDIGYQTGTGIMVGSPGQTIEHLIQDILFIEQLRPEMIGIGP 231

Query: 207 LTIEKGTLFYK 217
               + T F +
Sbjct: 232 FLSHRDTPFAQ 242


>gi|189347017|ref|YP_001943546.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
 gi|189341164|gb|ACD90567.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
          Length = 469

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 79/237 (33%), Gaps = 23/237 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  +   L EM++ ++  G + I+  F          P+
Sbjct: 207 CPVGCNFCTTPTIYGKNYRYRE--LDLVLEEMRYHQERLGKQKINFSFMDDNI--SFRPK 262

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +AK       V      + + ++         ++G + +S+G +SL  ++L+
Sbjct: 263 YFMTLLEEMAKL-----GVHWNANISMNFLDKPEVAELAGRSGCDLLSIGFESLNPETLK 317

Query: 147 FL----GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +     R  N  +    +    N    +    ++     T   +++     +   ++  
Sbjct: 318 SVQKGSNRLGNYEKV---VSNLHNNGIAIQGYFMFGFDNDTEESFQLTYDFIMKNRIEFP 374

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
               +T   GT ++   K     L  +      Y         + +         E+
Sbjct: 375 VFSLVTPFPGTPYFDEMKSRVRHLDWDKYDTYHYMFEPNKMSGEKLLENFVKLQKEV 431


>gi|332687127|ref|YP_004456901.1| putative Fe-S oxidoreductase [Melissococcus plutonius ATCC 35311]
 gi|332371136|dbj|BAK22092.1| predicted Fe-S oxidoreductase [Melissococcus plutonius ATCC 35311]
          Length = 330

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 10/203 (4%)

Query: 35  CDFNSHVRRYK---VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F S            E     F  E+Q M +         ++F   T +    + I  
Sbjct: 52  CTFCSVSGSGDMIVAPNEPLPIQFRKEIQLMEKKWPNVEQYIVYFQNFTNTHAPVEIIRH 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             + +     V   V ++I   P  +         +        + LG+Q+  E++   +
Sbjct: 112 RFEQVINEKGV---VGLSIGTRPDCLPEETIDYLAELNERFYLWVELGLQTTFEKTSNQI 168

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR-ALSYAVDHLSLYQL 207
            R H+    + ++   R    R+   LI  L  ++       ++R  L   +  + L+ L
Sbjct: 169 NRAHDYQTYLTSVEKLRQHNIRVCTHLINGLTGESFEMMRDNVRRTLLDSDIQGIKLHLL 228

Query: 208 TIEKGTLFYKMHKDGDLVLPSEN 230
            +   T   + + +G L L ++ 
Sbjct: 229 HLMTNTKMIQDYHEGRLKLMTQE 251


>gi|260767222|ref|ZP_05876163.1| tRNA-i(6)A37 methylthiotransferase [Vibrio furnissii CIP 102972]
 gi|260617730|gb|EEX42908.1| tRNA-i(6)A37 methylthiotransferase [Vibrio furnissii CIP 102972]
 gi|315180847|gb|ADT87761.1| 2-methylthioadenine synthetase [Vibrio furnissii NCTC 11218]
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 73/232 (31%), Gaps = 24/232 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                +   L E+  + +  G R ++ +      + G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPMHD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            ++     +  ++  I        +      ++P     +    Y      V+ + L VQ
Sbjct: 213 GTICSFAELLRLVASIDGI-----DRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H   E  + I   R   P +  S D I   P ++   ++  ++    
Sbjct: 268 SGSDRILTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGESDKDFQDTMKLIRD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              D    +  +   GT       D    L  E     LY L Q I +    
Sbjct: 328 VDFDMSFSFIFSPRPGTPAA----DYPCDLTEETKKERLYELQQQINAQAMR 375


>gi|301061594|ref|ZP_07202352.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300444287|gb|EFK08294.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 477

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 86/269 (31%), Gaps = 35/269 (13%)

Query: 6   AYENNMTGQGSNSLGV--YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           AYE         +L +  Y+H P         C  +C +CD +   R Y+  +  +I + 
Sbjct: 179 AYEKLQGFPKGYNLPLFSYIHTPGATMVTSRGCPYQCSFCDRSVFSRGYRYNKAAYIYAH 238

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
              ++          +  +       +     +   I +      +    ++        
Sbjct: 239 AAYLR------KRFGVRHVNIYDDLFTT----HRNRIAEFCTLLISKPLGMQFNCAVRVG 288

Query: 116 SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSF 173
             +    +  + AG  ++SLG+++  +++   + +   H        +   +    R   
Sbjct: 289 HCDDELLEMLKAAGFLQLSLGIETG-DETQMAIHKPGVH-LEAVRDTVRRIQAKGLRAKG 346

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY-----------KMHKDG 222
             +  LP +T        + ALS  +D +++ + T   G   +              +  
Sbjct: 347 LFMMGLPGETRASIRKTTRFALSLGLDDMNMSKFTPFHGAPLWDSIGDEGMLHEDWRQMN 406

Query: 223 DLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            L       ++D   + + + + H    Y
Sbjct: 407 CLNFVFVPRSIDSKEVLEELYNRHVKQFY 435


>gi|237713805|ref|ZP_04544286.1| biotin synthase [Bacteroides sp. D1]
 gi|262409288|ref|ZP_06085831.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644701|ref|ZP_06722450.1| radical SAM domain protein [Bacteroides ovatus SD CC 2a]
 gi|294805938|ref|ZP_06764805.1| radical SAM domain protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229446252|gb|EEO52043.1| biotin synthase [Bacteroides sp. D1]
 gi|262352740|gb|EEZ01837.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639964|gb|EFF58233.1| radical SAM domain protein [Bacteroides ovatus SD CC 2a]
 gi|294446820|gb|EFG15420.1| radical SAM domain protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 358

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 67/193 (34%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  +  + +   RQ       + +  GG  P  +   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLNLESILDCCRQGYKLGFRTFVLQGGEDP-ALTDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +  I +N+      +  I  +      + ++ + +AG NR  L  ++  E   R 
Sbjct: 117 RIEMTVARIRQNYP-----DCAITLSLGEKSRDAYERFFRAGANRYLLRHETHNESHYRQ 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +  + +  +   ++I  +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPAEMSGKQRLQCLADLKDIGYQTGTGIMVGSPGQTVEHIIEDILFIEKLQPEMIGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T F +  
Sbjct: 232 FLPHHDTPFAQYP 244


>gi|237795210|ref|YP_002862762.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Ba4
           str. 657]
 gi|229262035|gb|ACQ53068.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Ba4
           str. 657]
          Length = 450

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E         ++  +++L           G    S    
Sbjct: 169 CNNFCTYC-----IVPYVRGRER--SRTPENIEAEIKKLISEGYKEITLLGQNVNSYGKD 221

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP+   A +L  +     +       + ++P  +  +  +   K      +I L VQS 
Sbjct: 222 LEPKITFAELLKRVNNIEGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSG 279

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L       
Sbjct: 280 SSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEETLSLVKEVE 339

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D    +  +I KGT   K
Sbjct: 340 YDSAFTFLYSIRKGTPAAK 358


>gi|168184857|ref|ZP_02619521.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Bf]
 gi|182672056|gb|EDT84017.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Bf]
          Length = 450

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 73/199 (36%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E         ++  +++L           G    S    
Sbjct: 169 CNNFCTYC-----IVPYVRGRER--SRTPENIEAEIKKLISEGYKEITLLGQNVNSYGKD 221

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP+   A +L  +     +       + ++P  +  +  +   K      +I L VQS 
Sbjct: 222 LEPKITFAELLKRVNNIEGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSG 279

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L       
Sbjct: 280 SSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEETLSLVKEVE 339

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D    +  +I KGT   K
Sbjct: 340 YDSAFTFLYSIRKGTPAAK 358


>gi|163787102|ref|ZP_02181549.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Flavobacteriales bacterium ALC-1]
 gi|159876990|gb|EDP71047.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Flavobacteriales bacterium ALC-1]
          Length = 487

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEP 86
           C  KC +C    +  RY      +I      ++++ +  G  R        G  P     
Sbjct: 213 CPFKCNWCAKPIYGNRYNSHSPEYI---TKHIKYLSETYGVNRFWMCDDIFGLKP----- 264

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N     +   K   +S +  I    +   ++ +      ++G+  + +G +S  ++ L 
Sbjct: 265 -NWVQNFNKALKKEQLSISYYIQSRVDL-LLKEDTIDALAESGLEEVWVGAESGSQKILD 322

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL-- 204
            + ++    +   A  L +  F R++F + +    +T       +    +   D+L +  
Sbjct: 323 AMDKDTTVEQIYKATRLLKEKFVRVAFFIQFGYLNETKEDIAKTVAMIKALVPDNLGVSV 382

Query: 205 -YQLTIEKGTLFYKMH 219
            Y L    GT FY   
Sbjct: 383 SYPL---PGTKFYDKV 395


>gi|153213858|ref|ZP_01949064.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae 1587]
 gi|124115692|gb|EAY34512.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae 1587]
          Length = 375

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 58  CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 111

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 112 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 170

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 171 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 230

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 231 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 278


>gi|15640978|ref|NP_230609.1| hypothetical protein VC0962 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591016|ref|ZP_01678333.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|147675479|ref|YP_001216435.1| hypothetical protein VC0395_A0484 [Vibrio cholerae O395]
 gi|153820006|ref|ZP_01972673.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153827451|ref|ZP_01980118.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|183179699|ref|ZP_02957910.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|227081136|ref|YP_002809687.1| hypothetical protein VCM66_0918 [Vibrio cholerae M66-2]
 gi|229505438|ref|ZP_04394948.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae BX 330286]
 gi|229510892|ref|ZP_04400371.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae B33]
 gi|229512945|ref|ZP_04402411.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae TMA 21]
 gi|229518013|ref|ZP_04407457.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae RC9]
 gi|229523246|ref|ZP_04412653.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae TM 11079-80]
 gi|229525572|ref|ZP_04414977.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae bv. albensis
           VL426]
 gi|229529943|ref|ZP_04419333.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae 12129(1)]
 gi|229608457|ref|YP_002879105.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           cholerae MJ-1236]
 gi|254225710|ref|ZP_04919316.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254285632|ref|ZP_04960596.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254848093|ref|ZP_05237443.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744745|ref|ZP_05418696.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholera CIRS 101]
 gi|262161121|ref|ZP_06030232.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae INDRE 91/1]
 gi|262168624|ref|ZP_06036319.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae RC27]
 gi|298498922|ref|ZP_07008729.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae MAK 757]
 gi|81545216|sp|Q9KTE0|MIAB_VIBCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891023|sp|A5F2X6|MIAB_VIBC3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|9655421|gb|AAF94124.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547126|gb|EAX57258.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|125621718|gb|EAZ50046.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126509457|gb|EAZ72051.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|146317362|gb|ABQ21901.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|149738628|gb|EDM52981.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150424494|gb|EDN16431.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|183013110|gb|EDT88410.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|227009024|gb|ACP05236.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012779|gb|ACP08989.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229333717|gb|EEN99203.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae 12129(1)]
 gi|229339153|gb|EEO04170.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae bv. albensis
           VL426]
 gi|229339609|gb|EEO04624.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae TM 11079-80]
 gi|229344728|gb|EEO09702.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae RC9]
 gi|229349838|gb|EEO14792.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae TMA 21]
 gi|229350857|gb|EEO15798.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae B33]
 gi|229357661|gb|EEO22578.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae BX 330286]
 gi|229371112|gb|ACQ61535.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae MJ-1236]
 gi|254843798|gb|EET22212.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737776|gb|EET93170.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholera CIRS 101]
 gi|262022742|gb|EEY41448.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae RC27]
 gi|262028871|gb|EEY47524.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae INDRE 91/1]
 gi|297543255|gb|EFH79305.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae MAK 757]
 gi|327483685|gb|AEA78092.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae LMA3894-4]
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 211 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 330 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 377


>gi|261379974|ref|ZP_05984547.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria subflava
           NJ9703]
 gi|284797173|gb|EFC52520.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria subflava
           NJ9703]
          Length = 440

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   LTE+  + Q  G + I+ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE--- 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +E   I      +     +     +     +P        + YR     V+ + L +QS
Sbjct: 210 -MENGEICDFATLLRIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R + A E  + I    A      +S D I   P +T  ++E  L+     
Sbjct: 269 GSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDI 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           A D   ++  +   GT    +H
Sbjct: 329 AFDLSFVFIYSPRPGTPAANLH 350


>gi|254463508|ref|ZP_05076924.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2083]
 gi|206680097|gb|EDZ44584.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 440

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 78/238 (32%), Gaps = 27/238 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              +Q  + E + + +  G R I+ +      + G  P 
Sbjct: 159 CDK---FCAFCVVPYTRGAETSRPVQRIVDEAKNLVER-GVREITLLGQNVNAYHGTGP- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                N   +   I +   V     I     +P+ ++ +    +      +  + L VQS
Sbjct: 214 ---DGNEWGLAQLIWELDKVDGLARIRFTTSHPNDMQDDLIDAHAHCAKLMPYLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   +  I   R   P +  S D I   P++T   ++  L      
Sbjct: 271 GSDRILKRMNRSHTADSYLRLIERIRAARPDILMSGDFIVGFPEETEEDFQATLDLIKEV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +   ++ +   GT   +  +  D                Q + +       EI N
Sbjct: 331 RYGYAYSFKYSTRPGTPAAERAQVED---------AVAAERLQRLQALITQQQVEIQN 379


>gi|194476570|ref|YP_002048749.1| hypothetical protein PCC_0084 [Paulinella chromatophora]
 gi|171191577|gb|ACB42539.1| hypothetical protein PCC_0084 [Paulinella chromatophora]
          Length = 470

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 68/205 (33%), Gaps = 11/205 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-----QWMRQLTGPRSISSIFFGGGTPS 82
           C ++C YC   S   + +      I+  +  +     + +  L            G +P 
Sbjct: 177 CNERCTYCVVPSVRGKEQSRLPESIKMEMEILATQGFREVTLLGQNVDAYGRDLAGISPE 236

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  + +   ++     T  ++P        +             +  QS 
Sbjct: 237 GRRHNTLTALLYFVHEVKGINRIRFAT--SHPRYFTERLIEACSNLSKVCEHFHIPCQSG 294

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++ L+ + R +N       +   R+  P   +S D+I A P +T TQ++  L+      
Sbjct: 295 DDEVLKTMARGYNVDRYYRIVDRIRSRMPDASISADIIVAFPGETDTQYQRTLELVEKVG 354

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D ++    +    T         D
Sbjct: 355 FDQVNTAAYSPRPNTPASNWSIQVD 379


>gi|167585516|ref|ZP_02377904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ubonensis
           Bu]
          Length = 457

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDMYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S DLI   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEADFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|120603047|ref|YP_967447.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Desulfovibrio
           vulgaris DP4]
 gi|120563276|gb|ABM29020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfovibrio vulgaris
           DP4]
          Length = 476

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 18/216 (8%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQW 61
            + + GQG+    V+V+    C   C YC    + R  +  +      +  ++ L     
Sbjct: 164 RDAVLGQGAVPASVFVNIMQGCDNFCAYC-IVPYTRGRQKSRATGTILDECRALLDRGAR 222

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L G    S      G  +       A +L  +A    +     +T   +P  +    
Sbjct: 223 EITLLGQNVNSFGQDSHGDGTTF-----AQLLHKVAALPGLERLRFVT--PHPKDIAPEV 275

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            + +        R+ L +Q+  ++ L+ +GR ++ +  +  +   R   P +  S D+I 
Sbjct: 276 VEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLRAARPDIVLSSDIIV 335

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             P +T   +   +    +        +  +   GT
Sbjct: 336 GFPGETEEDFMETMGALETVGYAASYSFCYSDRPGT 371


>gi|94498011|ref|ZP_01304575.1| 2-methylthioadenine synthetase [Sphingomonas sp. SKA58]
 gi|94422594|gb|EAT07631.1| 2-methylthioadenine synthetase [Sphingomonas sp. SKA58]
          Length = 428

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C YC                  + + E + +    G R I+ +       +  +  
Sbjct: 141 CDKFCTYC---VVPYTRGAEISRSWSAIVDEAKALVD-GGAREITLLGQNVNAWTGEDDK 196

Query: 86  --PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              Q +  ++  +AK   +      T  ++P+ +       +      +  + L VQ+  
Sbjct: 197 GRAQGMDGLVRELAKIPDLRRIRYTT--SHPNDMSDGLIAAHGDIDKLMPFLHLPVQAGN 254

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R+H+A   +  I   R   P ++   D I   P +T  ++E  L+       
Sbjct: 255 DRILKAMNRSHSADSYLRIIERVRQARPDIAISGDFIVGFPGETDAEFEDTLRIVEQVRY 314

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT    M       +  E ++     L +     +
Sbjct: 315 AQCYSFKYSPRPGTPAADMDHQIPAAVMDERLSRLQALLNRQQAEFN 361


>gi|88860395|ref|ZP_01135033.1| radical SAM domain/B12 binding domain protein [Pseudoalteromonas
           tunicata D2]
 gi|88817593|gb|EAR27410.1| radical SAM domain/B12 binding domain protein [Pseudoalteromonas
           tunicata D2]
          Length = 542

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 65/201 (32%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   S +       E  ++ FL +M  + Q  G R+   I         +   
Sbjct: 212 CPFKCEFC--LSSLDTASNPFE--LELFLDQMDILYQR-GARNFKFID----RTFNLNIA 262

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQS 144
               I+       T   ++ +  E  P  +     +        G  +  +G+Q+   + 
Sbjct: 263 TTMQIMQFFLDRMT--DDLFLHFEVVPDHL-PRKLKELLTLFPDGSLQFEVGIQTFNPEV 319

Query: 145 LRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              + R  N        I L  N    +  DLI+ LP +T   +              + 
Sbjct: 320 QTNISRKQNNPKSKENLIWLKDNTSAHIHADLIFGLPGETFETFRESFNELYQCRPHEIQ 379

Query: 204 LYQLTIEKGTLFYKMHKDGDL 224
           L  L   KG+   +  +  DL
Sbjct: 380 LGILKRLKGSPIIRHTETFDL 400


>gi|150015191|ref|YP_001307445.1| biotin synthase [Clostridium beijerinckii NCIMB 8052]
 gi|149901656|gb|ABR32489.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 348

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 72/201 (35%), Gaps = 19/201 (9%)

Query: 22  YVH----WPF---CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           YVH      F   C + C YC     +RR     E +  +    + + ++        ++
Sbjct: 47  YVHLRGLIEFTNICKRNCLYCG----LRRDNKNLERYRLTEEEILDFAKKAV-SYGYKTL 101

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
              GG       + +  I+  I K         + +  +        ++ +++AG +R  
Sbjct: 102 VLQGGEDDYFTKERMTNIVKEIKKLN-------VALTLSLGEKTYEEYKAFKEAGADRYL 154

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           + +++ +++    +  N +  E +  +   R++   +   ++  LP QT+     ++   
Sbjct: 155 IRIETTDKKLYEDMDPNMSFEERLNCLKNLRDLGYEVGSGILVGLPNQTLESIASDILFF 214

Query: 195 LSYAVDHLSLYQLTIEKGTLF 215
                D + +      + T  
Sbjct: 215 KEINADMIGIGPFIPNEDTPL 235


>gi|322418994|ref|YP_004198217.1| MiaB-like tRNA modifying enzyme [Geobacter sp. M18]
 gi|320125381|gb|ADW12941.1| MiaB-like tRNA modifying enzyme [Geobacter sp. M18]
          Length = 432

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 14/213 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C YC     +  Y  G    +   ++      +  +      ++ I  G     L 
Sbjct: 152 CDARCAYC-----IVPYARGASRSVAPQEALDGMAAFAAKGFQEIVLTGIHLGAYGLDLD 206

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEE 142
            P ++  ++       +V      ++E  P+ V          + +    + L +QS  +
Sbjct: 207 PPTDLLGLMKLAEGQGSVRRLRIGSVE--PTEVPAEMISFMAGSRIVCPHLHLPLQSGSD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R ++ +     +     + P +    D+I   P +T  ++E  L    S  + 
Sbjct: 265 GVLSRMNRGYDTALFGDVVRALVAVMPDVCIGSDVIAGFPGETDREFEEALSFIESLPLA 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           +L ++  +   GT    M       +  E    
Sbjct: 325 YLHVFPFSQRPGTPAATMAAQVQPRVIKERAEA 357


>gi|170759590|ref|YP_001787388.1| radical SAM domain-containing protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169406579|gb|ACA54990.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 289

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 92/235 (39%), Gaps = 17/235 (7%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ + 
Sbjct: 27  HNKCSFCS----MYKNEKFRVRELKEIFEDLEESKSYY--RRINRIFLADGDALCLKTET 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L  
Sbjct: 81  LKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKELRELGLGIVYMGLESGSPEILED 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSY-AVDHLS 203
           + +     E I A   AR    + S  +I  L      +W+    E  +ALS    D++ 
Sbjct: 141 INKGVKVEEYIEASKKARASGIKSSITVISGLGG--KEKWQQHAIETGKALSLIDPDYVG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
           L  L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 199 LLTLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|134093371|ref|YP_001098446.1| hypothetical protein HEAR0081 [Herminiimonas arsenicoxydans]
          Length = 483

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 68/232 (29%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C   S + +     +  I  FL E++    +           F     + ++ 
Sbjct: 147 CPFKCEFC--LSALDKTAWPFD--IDLFLAELEVLHARGARLFKFVDRTFNLNIKTSLKI 202

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
                 LD +  N      V    E  P  +     +G  K   G  +  +G+QS   + 
Sbjct: 203 MQFF--LDKLEANP--QDPVFAHFEVVPDHLPDALKEGIMKFPPGTLQFEIGIQSFNPEV 258

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              + R  N  +A   I          +  DLI  LP + +  +     R L      + 
Sbjct: 259 QALVSRKQNNEKAAENIRWLCEHSHAHLHVDLIAGLPGEDIASFARGFDRLLELQPHEIQ 318

Query: 204 LYQLT------IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              L       I + T  Y M  D              +N  Q +       
Sbjct: 319 FGILKRLRGTPIIRHTEQYGMVFDPYPPYTILATDRIDFNAMQQLVRFARYW 370


>gi|320353708|ref|YP_004195047.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122210|gb|ADW17756.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 439

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 70/196 (35%), Gaps = 19/196 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC     N  V RY++  E  +      ++            ++    G    
Sbjct: 50  YCARSCHYCGLRAPNRQVSRYRLSAEEILDCADQAVRL--------GYGTLVLQSGEDDR 101

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           IE + +A +L  I     ++      +  +      ++ + +R+AG +R  L  ++ +  
Sbjct: 102 IEAEWLASLLRHIKATTPLA------LTLSLGERSEDDLRIWREAGADRYLLRFETSDRA 155

Query: 144 SLRFLG--RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             R +   R    S+ +A +   +++       ++  +P Q+      ++       +D 
Sbjct: 156 LYRAIHPDRGARVSDRLALLRQLKSLGYETGSGVMVGIPGQSYAILADDILLFRELDLDM 215

Query: 202 LSLYQLTIEKGTLFYK 217
           + +        T   +
Sbjct: 216 IGIGPFIAHPDTPLGQ 231


>gi|307702048|ref|ZP_07639055.1| radical SAM protein, family [Streptococcus mitis NCTC 12261]
 gi|307616535|gb|EFN95725.1| radical SAM protein, family [Streptococcus mitis NCTC 12261]
          Length = 315

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HEKVEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 99  IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYETTSDLI 158

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 159 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 218

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 219 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 262


>gi|237742337|ref|ZP_04572818.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|229429985|gb|EEO40197.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
          Length = 261

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 4/192 (2%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI-TI 110
           I+   +++   R L   R++  IF   G   ++    +  +LD I + +     V I   
Sbjct: 12  IEDIKSDIDAFRALYKNRAVEKIFLADGDALVVPTDILIQVLDYIREVFPECKRVSIYGT 71

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
                   V + +   + G+  + LGV+S ++++L+F+ +   A + +       +    
Sbjct: 72  AIAIHQKSVEDLKKLYEKGLTLVYLGVESGDDEALKFIKKGIKAEKIVELSKKIMSTGID 131

Query: 171 MSFDLIYALPK---QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           +S  LI  L               +     +  + S+  L + +GT  Y + +DG     
Sbjct: 132 LSITLIAGLLGKYQDNKMHAINTAKIITDISPKYASILNLRLYEGTELYNLMQDGKYDYM 191

Query: 228 SENVAVDLYNLT 239
                +    L 
Sbjct: 192 EGIEVLKEMKLV 203


>gi|168185013|ref|ZP_02619677.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|237795429|ref|YP_002862981.1| radical SAM domain-containing protein [Clostridium botulinum Ba4
           str. 657]
 gi|182671926|gb|EDT83887.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|229264190|gb|ACQ55223.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 289

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 93/235 (39%), Gaps = 17/235 (7%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ + 
Sbjct: 27  HNKCSFCS----MYKNEKFRVRELKEIFEDLEESKSYY--RRINRIFLADGDALCLKTET 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L  
Sbjct: 81  LKKILLKIKETHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILED 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSY-AVDHLS 203
           + +   A E I A   AR    + S  +I  L      +W+    E  +ALS    D++ 
Sbjct: 141 INKGVKAEEYIEASKKARASGIKSSITVISGLGG--KEKWQQHAIETGKALSLIDPDYVG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
           L  L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 199 LLTLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|126652827|ref|ZP_01724972.1| Fe-S oxidoreductase [Bacillus sp. B14905]
 gi|126590363|gb|EAZ84483.1| Fe-S oxidoreductase [Bacillus sp. B14905]
          Length = 449

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  L + Q +        + +    GG    ++  
Sbjct: 158 CNNFCTFC---IIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGGYGQDLKDY 214

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N+A +L D  A    +      +IEA+   +        R++   VN + + +QS  +  
Sbjct: 215 NLAQLLRDLEANVKGLKRLRISSIEAS--QLTDEVIDVLRESKIVVNHLHIPIQSGSDTV 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +       P ++   D+I   P +T  ++         +    L
Sbjct: 273 LKRMRRKYTMEFFGERLTKLHEALPDLAVTSDVIVGFPGETEEEFMDTYNFIRDHKFSEL 332

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +E V   +     L +   S       E+
Sbjct: 333 HVFPFSPRTGTPAARMEDQIDEDIKNERVHRLISLNDQLAKEYASRFEDQVLEV 386


>gi|15644605|ref|NP_229658.1| hypothetical protein TM1862 [Thermotoga maritima MSB8]
 gi|81553760|sp|Q9X2H6|RIMO_THEMA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|4982447|gb|AAD36924.1|AE001823_6 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 430

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 36/240 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--------QENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C   S     +           E+ ++    E+  + Q T    I        
Sbjct: 148 CDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQAL 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                 P  +  +     + W         +  +P  +         +    V    + V
Sbjct: 208 ------PDLLRRLNSLNGEFWIR------VMYLHPDHLTEEIISAMLELDKVVKYFDVPV 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR  ++ E    +   R  FP       +I   P +T   +E   Q   
Sbjct: 256 QHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D L  +  + E+GT+ + + +  D              + +       L   EISN
Sbjct: 316 EIQFDKLGAFVYSDEEGTVAFNLKEKVDP------------EMAKRRQEELLLLQAEISN 363


>gi|323140945|ref|ZP_08075857.1| B12 binding domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414548|gb|EFY05355.1| B12 binding domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 570

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   S + R    ++  ++  L ++   R +     +            ++ +
Sbjct: 185 CPFNCAYC--LSSISR--SVRKRPLELVLRDLD--RFIAAGVPLVKFVDRTYN---LDEK 235

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
               ++  +A+     +N     E     +              R  L  G+QS  + +L
Sbjct: 236 YFLPMMQHLAQA---DTNATFHFEIKADILSERVMDFLATVPKGRFQLEIGIQSTHQPTL 292

Query: 146 RFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R  N  +  A +    +     +  DLI  LP + +  +            D L L
Sbjct: 293 KAINRQDNWEKLAANVKRLLSFGNMHIHVDLIAGLPYEDLPTFAKSFDDVYGLGADMLQL 352

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSIT 243
             L +  GT   +    H    +  P   +    Y   + + 
Sbjct: 353 GFLKVLPGTQMRRETEQHDLRYMDEPPYEILATKYMPYEDML 394


>gi|229592783|ref|YP_002874902.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           fluorescens SBW25]
 gi|229364649|emb|CAY52570.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 442

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 71/228 (31%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEIIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
               L +   +A + + I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YR-GLTQDGRLADLAELIRVVAAVDGIERIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH A E  + +   R   P +    D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILSAMKRNHTALEYKSKLRKLRAAVPGICISSDFIVGFPGETEKDFQQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  +    L  E +    + L Q 
Sbjct: 325 IEDVGFDFSYSFVYSQRPGTPAADLVDETPEALKKERLNALQHRLNQQ 372


>gi|209881518|ref|XP_002142197.1| radical SAM domain-containing protein [Cryptosporidium muris RN66]
 gi|209557803|gb|EEA07848.1| radical SAM domain-containing protein [Cryptosporidium muris RN66]
          Length = 977

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 88/252 (34%), Gaps = 20/252 (7%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  + V+     R+ G  R+ LG+Q  +   L+ + R     + I AI L +
Sbjct: 342 IGLTLETRPDYITVDEISHLRELGCTRVQLGIQHTDNMVLKLINRGCYMKQVIKAIRLLK 401

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS--LYQLTIEKGTLFYKMHKDGD 223
           +   ++   L+  LP     +   ++       +D+    L  L I+ G  +       +
Sbjct: 402 DTAYKVDIHLMPDLPNPYDHKNIKDMTIEDKKYIDNKRNILLDLQIDIGQKYAPSLGVVN 461

Query: 224 LVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-------YI 276
             +   NV                L+  E+   S +      N+ Y  Y +       Y+
Sbjct: 462 DYIMLSNVLSSPMLQCDQ----WKLYPCEVVPFSKIEEWYESNM-YIPYTEIYPESLCYL 516

Query: 277 GIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLR 336
            +      +V +        + +   +  + +    +    ++ LS + +    +   LR
Sbjct: 517 LLSC----KVGLHPWIRINRVIRDIPN--QSIIAGNNCTNLRQILSEKMKMMSLVCRCLR 570

Query: 337 LREGISVKDWEM 348
            RE      ++ 
Sbjct: 571 CREIKDKHLYQQ 582


>gi|34540755|ref|NP_905234.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Porphyromonas
           gingivalis W83]
 gi|81416611|sp|Q7MAW4|MIAB_PORGI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|34397069|gb|AAQ66133.1| tRNA-i(6)A37 modification enzyme MiaB [Porphyromonas gingivalis
           W83]
          Length = 463

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +   + +  +R L           G    S    +
Sbjct: 174 CNNFCSYC-----IVPYTRGRERS-REIESILNEVRDLKAKNFREVTLLGQNVNSY-RYE 226

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I+        V+  V          +P  ++        +     N I L  QS  
Sbjct: 227 QNGRIIRFPDLLAAVAEAVPDMRIRFTSPHPKDMDDEAIAVMARYRNICNHIHLPAQSGS 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R +     +  +   R   P   +S DL      +T   +E  L        
Sbjct: 287 DKMLRVMKRGYTRRWYLDRVAAIRRAIPDCAISSDLFCGFHSETEEDFEATLSLMEEVRY 346

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   +
Sbjct: 347 DSAFMFKYSERPGTYAAR 364


>gi|15639261|ref|NP_218710.1| hypothetical protein TP0269 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025503|ref|YP_001933275.1| hypothetical protein TPASS_0269 [Treponema pallidum subsp. pallidum
           SS14]
 gi|6136505|sp|O83293|Y269_TREPA RecName: Full=Putative methylthiotransferase TP_0269
 gi|3322542|gb|AAC65257.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018078|gb|ACD70696.1| hypothetical protein TPASS_0269 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059672|gb|ADD72407.1| hypothetical protein TPChic_0269 [Treponema pallidum subsp.
           pallidum str. Chicago]
 gi|308208122|gb|ADO20311.1| putative tRNA modification protein [Treponema pallidum subsp.
           pallidum]
 gi|313505246|gb|ADR64389.1| putative MiaB tRNA modification protein [Treponema pallidum subsp.
           pallidum str. Mexico A]
          Length = 482

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 55/292 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R +       +          +      ++ +         I+  
Sbjct: 213 CNSGCAFC--RIRFARGRAVSLETHEVIGRVQALEARGMSEVVLTGVNLSQYRSGSIDFA 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLR 146
            +  ++        +           P SV     +      V+    L VQS  ++ LR
Sbjct: 271 GLLELIVQETHTIHIR-----ISSLYPESVTSAFLRAIAHTRVSPHFHLSVQSGSDRVLR 325

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R +  ++   A+   R++     +  D+I   P +T   +    +   +     + +
Sbjct: 326 RMRRAYTRADIYQAVSDLRSVREEPFLGCDIIVGFPGETEEDFADTQRMCKTLRFAGIHV 385

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           +  +   GT  + M       +  E VA           +     AY             
Sbjct: 386 FPFSARPGTEAFAMDAKVPQRIAGERVAAMQQ------LAEKNYRAY------------- 426

Query: 265 HNLNYWRY----------------GDYI--------GIGPGAHSRVKVGSHR 292
             L YW                   +Y+        G+   A S V++  H 
Sbjct: 427 --LEYWNGRELCAVVEQSVARVLTENYLSLPIIERGGVAASAGSHVRIRVHN 476


>gi|325263898|ref|ZP_08130631.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. D5]
 gi|324030936|gb|EGB92218.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. D5]
          Length = 481

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E         ++ + +L     I  +  G    S    +
Sbjct: 200 CNNFCSYC-----IVPYVRGRERSRNPL-DIIREIEELVADGVIEVMLLGQNVNSYGKTL 253

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P + A +L  I K   +       + ++P  +     +   ++      + L +QS  
Sbjct: 254 EQPMSFAQLLQEIEKIEGLRRIRF--MTSHPKDLSDELIEVMGRSEKICRHLHLPIQSGS 311

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +  +   R   P +S   D+I   P +T   ++  L        
Sbjct: 312 SRILEKMNRRYTKEHYLELVGKIRASVPDISLTTDIIVGFPGETEEDFQETLDIVRKVRY 371

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 372 DSAFTFIYSKRTGTPAAVM 390


>gi|261253662|ref|ZP_05946235.1| tRNA-i(6)A37 methylthiotransferase [Vibrio orientalis CIP 102891]
 gi|260937053|gb|EEX93042.1| tRNA-i(6)A37 methylthiotransferase [Vibrio orientalis CIP 102891]
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P+  
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HEGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T    +  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDHQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q++ +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDVPEQEKKERLYELQQTVNAQAMRYS 377


>gi|253681883|ref|ZP_04862680.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561595|gb|EES91047.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 444

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 84/266 (31%), Gaps = 27/266 (10%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFF 76
           Y+     C   C YC      +     +   I S + E + +  +     I     +  +
Sbjct: 148 YIRISEGCDNFCTYC---IIPKIRGKYRSRSIDSIVKEAKELSAMGVKELILVGQDTAIY 204

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
           G     +     +  ++  I++  ++       +   P  +     +  +      N + 
Sbjct: 205 GRD---IYSENKLPDLIRAISEIESIEWIR--VLYTYPEEITDELIEEIKNNDKVCNYLD 259

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           + +Q +    L+ + R          I   RN    +     +I   P +T  ++    +
Sbjct: 260 IPIQHVSNTVLKRMNRRSTKEIISENIRKMRNEIKDLCLRTSIIVGFPGETEDEFNELKE 319

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLH 249
                  D+L +++ + E+ T   +M       +     E + +    +++         
Sbjct: 320 FIKEIKFDNLGVFKYSQEEDTAAARMKDQISEEIKESRLEELMIIQQQVSKEKNKNKIRK 379

Query: 250 AYEISNHSFLGAESLHNLNYWRYGDY 275
            Y++      G    HN  YW   +Y
Sbjct: 380 VYKV---LIEG----HNDEYWIGRNY 398


>gi|167747917|ref|ZP_02420044.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
 gi|167652648|gb|EDR96777.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
          Length = 312

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 84/219 (38%), Gaps = 13/219 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+    + + K  +   +Q  L + +  R+     SI  IF   G   + + + +  
Sbjct: 53  CIFCN----MYKEKRFRMRPLQDVLADFREAREYYN--SIGKIFLADGDALICKNEYLNE 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IL  I +   +    ++T  A+P SV        +  R+ G++ + +G++S   Q L+F+
Sbjct: 107 ILKYIRE--EIPECRQVTCYASPKSVMIKTKEELRELRENGLDMVYMGLESGNAQVLKFM 164

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLSLYQ 206
            +     E I +    +    R+S   I  L  +   M       +   +   D++ L  
Sbjct: 165 KKGATPDEMIQSASKIKQAGIRLSVTAISGLGGKKLWMEHAVDTGKVFSAMKPDYIGLLT 224

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L IE G    +  + G+  L +    +    L       
Sbjct: 225 LMIEPGLPLEEKIRSGEFELITPYDNLKETKLMLEHMDC 263


>gi|163739041|ref|ZP_02146454.1| tRNA-i(6)A37 modification enzyme MiaB [Phaeobacter gallaeciensis
           BS107]
 gi|161387846|gb|EDQ12202.1| tRNA-i(6)A37 modification enzyme MiaB [Phaeobacter gallaeciensis
           BS107]
          Length = 440

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 70/203 (34%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E Q + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREAQDLVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  -LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
             +    +   LD +     +         ++P+ ++ +  + +      +  + L VQ+
Sbjct: 215 GDMTLAQLIWELDKVDGLERIR-----FTTSHPNDMQDDLIEAHGTCAKLMPYLHLPVQA 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A   +  I   R   P   +S D I   P++T   ++  L      
Sbjct: 270 GSDKILKRMNRAHTAESYLRLIERIRAARPDILISGDFIVGFPEETEADFQATLDLVEEV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
                  ++ +   GT   +  +
Sbjct: 330 KYGTAYSFKYSTRPGTPAAERPQ 352


>gi|323345215|ref|ZP_08085438.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
 gi|323093329|gb|EFZ35907.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
          Length = 452

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G   +   +
Sbjct: 171 CNYFCTYC---TIPYARGFSRNPTIASLVEQARQ-AVAEGGKEIVLTGVNIGDFGVTTNE 226

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
               ++  + K   V      ++E  P  ++    +   +  A +    + +QS  +  L
Sbjct: 227 RFIDLVKALDKVEGVKRYRISSLE--PDLLDDELIEYCARSRAFMPHFHIPLQSGSDDVL 284

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     I L +   P   +  D++     +    +E       S  +  L 
Sbjct: 285 KLMHRRYDRTLFAHKIQLIKEKMPDAFIGVDVMVGSRGERPEYFEDCYDFLRSLDITQLH 344

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 345 VFPYSERPGT 354


>gi|313888304|ref|ZP_07821975.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312845707|gb|EFR33097.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 438

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 74/241 (30%), Gaps = 27/241 (11%)

Query: 28  CVKKCPYC--------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC        + +  +       E  +     E+  + Q T    I        
Sbjct: 153 CNNNCSYCIIPSLRGKNRSRKIEDIYSEVEYLVSKGAREIILIAQNTTDYGID------- 205

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L    ++A +++ I+K   +       +   P        + ++     VN + + +
Sbjct: 206 ---LYSKYSLANLINKISKIEDLKWIR--VLYLYPDHFTDELIEEFKNNDKLVNYVDMPL 260

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q + +  L+ + R  +    I  +   R   P +      I   P ++   +   +    
Sbjct: 261 QHISDDVLKRMNRKTSKEHIIKTLKNLRKSVPDIVIRTTFIVGFPGESDDDFNQLVDFIE 320

Query: 196 SYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               D L +++ + E+GT      +   D         +      ++  I S       E
Sbjct: 321 DIKFDKLGVFEYSKEEGTRAASLDEQIPDSIKEERKNEIMAIQSEISAEILSKKIGKKLE 380

Query: 253 I 253
           +
Sbjct: 381 V 381


>gi|167570648|ref|ZP_02363522.1| radical SAM domain protein [Burkholderia oklahomensis C6786]
          Length = 481

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++  +   ++S L E++W+R       +  
Sbjct: 200 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHR-YRTRSVESVLAEVKWIRDNMP--EVKE 256

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 257 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 307

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       R +  ++    I  LP +T    +  +
Sbjct: 308 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCRKLGIKIHGTFILGLPGETKDTIKKTI 367

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y+ 
Sbjct: 368 EYAKEINPHTIQVSLAAPYPGTRLYEQ 394


>gi|325845974|ref|ZP_08169172.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481880|gb|EGC84912.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 293

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 9/208 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    ++  + +     I+S + E+      T PR I  I+   G P ++  
Sbjct: 25  CSHNKCAFCTMY-NMTNFGISPLKDIESDILEISM----TYPRPIERIYLLNGDPFVLST 79

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           Q +  I D I K    V +        N  +    + +  R+ G N +  GV++  ++ L
Sbjct: 80  QKLVEIADLIHKYIPEVKTITSYASFYNLKNKTKEDLKLLREKGYNELWFGVETGNQKVL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLS 203
            +L +  +  +    I   +      +  ++  +     ++       +    Y    + 
Sbjct: 140 DWLDKGADLDDYKKGIEKMKYANMTYNAIVMQGVAGNGNSIENARETAKFLNLYPPIGIF 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           +    ++ G+  YKM ++GD    S   
Sbjct: 200 IMSTDVQIGSKLYKMREEGDFKETSNRE 227


>gi|308208098|gb|ADO20291.1| putative tRNA modification protein [Treponema pallidum subsp.
           pertenue]
 gi|308208104|gb|ADO20296.1| putative tRNA modification protein [Treponema pallidum subsp.
           pertenue str. Gauthier]
 gi|308208110|gb|ADO20301.1| putative tRNA modification protein [Treponema pallidum subsp.
           pertenue]
 gi|308208116|gb|ADO20306.1| putative tRNA modification protein [Treponema pallidum]
          Length = 482

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 55/292 (18%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R +       +          +      ++ +         I+  
Sbjct: 213 CNSGCAFC--RIRFARGRAVSLETHEVIGRVQALEARGMSEVVLTGVNLSQYRSGSIDFA 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLR 146
            +  ++        +           P SV     +      V+    L VQS  ++ LR
Sbjct: 271 GLLELIVQETHTIHIR-----ISSLYPESVTSAFLRAIAHTRVSPHFHLSVQSGSDRVLR 325

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R +  ++   A+   R++     +  D+I   P +T   +    +   +     + +
Sbjct: 326 RMRRAYTRADIYQAVSDLRSVRGEPFLGCDIIVGFPGETEEDFADTQRMCKTLRFAGIHV 385

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           +  +   GT  + M       +  E VA           +     AY             
Sbjct: 386 FPFSARPGTEAFAMDAKVPQRIAGERVAAMQQ------LAEKNYRAY------------- 426

Query: 265 HNLNYWRY----------------GDYI--------GIGPGAHSRVKVGSHR 292
             L YW                   +Y+        G+   A S V++  H 
Sbjct: 427 --LEYWNGRELCAVVEQSVARVLTENYLSLPIIERGGVAASAGSHVRIRVHN 476


>gi|307243249|ref|ZP_07525420.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493377|gb|EFM65359.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
           stomatis DSM 17678]
          Length = 479

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 85/271 (31%), Gaps = 25/271 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +  +R L    +      G    S    +
Sbjct: 194 CNNFCTYC-----IVPYTRGRERS-RKPGDIIDEIRSLVKDGTKEVTLLGQNVNSYGKTL 247

Query: 85  EPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E          + +   +     I  + ++P  +  +     R        + L  Q+  
Sbjct: 248 EDDQKISFAQLLREVNKIDGLERIRFMTSHPKDISDDVIYAMRDCDKVCEFLHLPFQAGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R++   + +  I  A+   P +  S D++   P +T    +  +        
Sbjct: 308 TSLLKKMNRHYTKEDYLKIIEKAKREIPNLAFSTDIMIGFPGETDQDVDDTIDICEQVRY 367

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAHGLHAYEI--- 253
           D    +  +  +GT   KM       +  +        +  ++    + +     E+   
Sbjct: 368 DSAFTFIYSKRRGTPAAKMLDQVPDDVKHQRFERVLEVVNRISGEKNANYLGKTLEVLVE 427

Query: 254 ----SNHSFLGAESLHNLNY-WRYGDYIGIG 279
                N + L  +S HN    +  GD   IG
Sbjct: 428 GASKKNEAVLTGKSRHNKTVNFTGGDKSMIG 458


>gi|229890664|sp|A1S8S1|MIAB_SHEAM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 474

 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 16/225 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   + E+  + +  G R ++ +      + G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAK----H 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +     +     +     +P     +    Y      V+ + L VQS  +
Sbjct: 212 DGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       D
Sbjct: 272 RILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKLIEDVNFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               +  +   GT    +  D D+    + +A     + Q     
Sbjct: 332 MSFSFIYSARPGTPAADLPDDVDMEEKKQRLADLQELINQQAMRY 376


>gi|296121908|ref|YP_003629686.1| RNA modification enzyme, MiaB family [Planctomyces limnophilus DSM
           3776]
 gi|296014248|gb|ADG67487.1| RNA modification enzyme, MiaB family [Planctomyces limnophilus DSM
           3776]
          Length = 501

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 78/244 (31%), Gaps = 25/244 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V   +  +++ + S    +  +  L G         G    S    +
Sbjct: 194 CDKFCTYC----VVPMTRGPEQSRLPS--EILAEVAHLAGQGVKEVTLLGQTVNSYKCVE 247

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           N     ++ +L  + +   +     +T  + P  +  +     R      + I + +Q  
Sbjct: 248 NGKTWRLSDLLAAMHETPGMLRFKFVT--SYPRDMTDDLLIALRDLPKCSHYIHVPLQHG 305

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  +         +    +  +S D I     +T    +  L+    Y 
Sbjct: 306 CDDVLTRMKRGYTTAHYREMHQRIKEYLPYSAVSSDFIVGFCGETEESHQKSLEAIREYR 365

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             +  +++ +   GT   K        +P E          Q +       + E  N +F
Sbjct: 366 FKNSFIFKYSERPGT---KAQSLFQDDIPDEVKKRRN----QELLELQNEIS-EEDNAAF 417

Query: 259 LGAE 262
           +G E
Sbjct: 418 IGRE 421


>gi|270308549|ref|YP_003330607.1| tRNA I(6) A37 thitransferase miaB family [Dehalococcoides sp. VS]
 gi|270154441|gb|ACZ62279.1| tRNA I(6) A37 thitransferase miaB family [Dehalococcoides sp. VS]
          Length = 418

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 68/199 (34%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C   C YC      RR +       + +    + +R+  G R +  +      +G   P 
Sbjct: 134 CDNFCTYC--VVPYRRGREKSRTIAEIYCEAAELVRR--GSREVVLLGQNVDSYGHDLP- 188

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E   +A +L  +     +       + ++P  +               + +SL VQ+ 
Sbjct: 189 --EKPCLADLLHALHDIPGLLRIRF--LTSHPKDISQKLIDAMASLPKVCHSLSLPVQAG 244

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R + + +    +   +   P +S   DLI   P +T  Q++   +      
Sbjct: 245 ADTILAAMRRGYTSEQYRELVGRLKIAMPDISLQTDLIVGFPSETAEQFDQSYKLMSDIG 304

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D + +   +    T+  +
Sbjct: 305 YDAIHVAAYSPRPQTVAAR 323


>gi|229829135|ref|ZP_04455204.1| hypothetical protein GCWU000342_01220 [Shuttleworthia satelles DSM
           14600]
 gi|229792298|gb|EEP28412.1| hypothetical protein GCWU000342_01220 [Shuttleworthia satelles DSM
           14600]
          Length = 534

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +  +  ++ + +L     +  +  G    S    +
Sbjct: 249 CDNFCTYC-----IVPYVRGRERS-RRPVEIIREIERLVDDGVVEVMLLGQNVNSYGAGL 302

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E     A +L  I K   ++      + ++P  +          +    + + L +QS  
Sbjct: 303 EDHMSFAQLLSEIEKIEGLARIRF--MTSHPKDLSDELIDVIAASDKICHHVHLPLQSGS 360

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +A     R   P +S   D+I   P +    +E  +        
Sbjct: 361 SRLLARMNRRYTKESYLALADRIRKRIPNVSITTDIIVGFPGEEEEDFEDTMDVVRQVGY 420

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT   K 
Sbjct: 421 DSAFTFVYSPRTGTPAAKW 439


>gi|167042408|gb|ABZ07135.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_ANIW97P9]
          Length = 293

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 9/184 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD    + R K   E        E+  M +     +   +  G      +    +  
Sbjct: 32  CSFCD----MYRNKEYSEKSWDEVKAEIDLMAKQLPDTTRIFLADGDALN--LSTDYMVK 85

Query: 92  ILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I++ +  N+  +       +  N         +   +AG+N + LG++S  +  L+ + +
Sbjct: 86  IVEYLYNNFQKLERVSCYAMPMNLLKKTPEELKRMNEAGLNMLYLGIESGSDIILKKITK 145

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLSLYQLT 208
              +   I A   A      +S  +I  L  +T      +   +   + +  +L    L 
Sbjct: 146 GATSETIIRACRKAIENGFTLSCIIILGLGGKTYSQEHIKETARVVNASSPHYLGTLTLI 205

Query: 209 IEKG 212
           +E G
Sbjct: 206 LETG 209


>gi|160895345|ref|ZP_02076116.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
 gi|156863038|gb|EDO56469.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
          Length = 439

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I S + E++ +  LTG + I          S  + +
Sbjct: 156 CNQFCSYC---IIPYVRGRIRSRDIASIIEEVERLA-LTGVKEIVLTGI--HISSYGKDK 209

Query: 88  N----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +A ++D I+K  ++      ++E  PS +                   L +QS  
Sbjct: 210 ENEVGLADVIDAISKIESIKRIRLGSLE--PSIITDEFIDRIVDNEKVCPHFHLSLQSGC 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +   E      + R  F R  ++ D+I   P +T  ++   +       +
Sbjct: 268 NTVLKRMNRKYTCEEYFEKCEMLRKAFDRPALTTDVIVGFPGETEEEFRETVDYLTKLNL 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             + +++ +  +GT+   M    D V P          L     S     AYE S
Sbjct: 328 YEMHIFKFSPRQGTVAAGM---KDQVAPEIKNQRSDVLLA---LSERNKQAYEAS 376


>gi|52549017|gb|AAU82866.1| conserved hypothetical protein [uncultured archaeon GZfos21B5]
          Length = 430

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 74/210 (35%), Gaps = 37/210 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF------------IQSFLTEMQWMRQLTGPRSISSIF 75
           C+ KC YC     V++ +   +++            ++S   E++   Q +     SS  
Sbjct: 132 CIGKCTYC----IVKQARGKLKSYKSEKICEAVKSAVESGANEIRITSQDSSAYGWSSTD 187

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----V 130
                P+L+  + I  +         +          NP ++         +A       
Sbjct: 188 IK--LPALL--EQITSVEGDFRIRVGM---------MNPFTLMP-ILDELLEAFNTEKIF 233

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWE 188
               + VQS  ++ LR + RN+  ++ +  +   R  F    +S D I   P +T   + 
Sbjct: 234 KFFHVPVQSGSDRVLREMKRNYKVADFVEIVTNIRARFRQSTISTDFIIGFPTETEEDFF 293

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             L        + +++ + +   GT   K+
Sbjct: 294 ASLNLMEEIKPEKVNITRFSPRPGTEASKL 323


>gi|328541783|ref|YP_004301892.1| methylase protein (RNA modification enzyme), MiaB family
           [polymorphum gilvum SL003B-26A1]
 gi|326411535|gb|ADZ68598.1| Putative methylase protein (RNA modification enzyme), MiaB family
           [Polymorphum gilvum SL003B-26A1]
          Length = 422

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 76/207 (36%), Gaps = 27/207 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  +  G    +   +  +  +R+L     +  +  G    S    +
Sbjct: 146 CDHRCTFC-----IIPFGRGNSRSVPMGV-VVDQVRRLVDNGYLEIVLTGVDITSYGADL 199

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISL 135
                    +A IL  +     +  +   +IEA+P+ +    E           +    L
Sbjct: 200 PGAPRLGALVAKILKLVPGLKRLRLSSIDSIEADPALMRVVAEDERL-------MPHFHL 252

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q+ ++  L+ + R H  ++ I      R + P + F  D+I   P +T   +E  L  
Sbjct: 253 SLQAGDDLILKRMKRRHLRADTIRFCEEVRRLRPDVVFGADIIAGFPTETEAMFENSLAI 312

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                + HL ++  +   GT   +M +
Sbjct: 313 VDDCGLTHLHVFPFSPRPGTPAARMPQ 339


>gi|323499966|ref|ZP_08104924.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           sinaloensis DSM 21326]
 gi|323314983|gb|EGA68036.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           sinaloensis DSM 21326]
          Length = 474

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P+  
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HEGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T    +  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDHQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q++ +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDVPEQEKKERLYELQQTVNAQAMRYS 377


>gi|226950381|ref|YP_002805472.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843573|gb|ACO86239.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
          Length = 432

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC   F       K  ++          +  +       +S I        L  
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPEKIM----EEVEKLSKHGFKEIILSGIDIASYGFDLEG 207

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
             N+  IL+ I K   +      +I  +P+             ++       L +QS   
Sbjct: 208 KYNLTSILEEIDKVEGIERIRIGSI--DPTFFTEEEIIRISKLKRF-CPHFHLSLQSGCN 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           ++L+ + R +   +    +H  R     +S   D+I   P++T  ++    +      + 
Sbjct: 265 ETLKRMNRKYTVEQYKEIVHNLRTNIESVSITTDIIVGFPEETEEEFNKTYEFLRDIKLS 324

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            + +++ +  KGT   +M    D
Sbjct: 325 KMHVFKFSPRKGTRAEEMKNQVD 347


>gi|147668759|ref|YP_001213577.1| radical SAM domain-containing protein [Dehalococcoides sp. BAV1]
 gi|146269707|gb|ABQ16699.1| Radical SAM domain protein [Dehalococcoides sp. BAV1]
          Length = 494

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 78/254 (30%), Gaps = 22/254 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   +    +    +  ++  + +++    L     +  I F     +     
Sbjct: 193 CPFKCSFC--YNIPFHHGHRADLSVERIVAQIE---HLQKNYKVKFIRFFEDNFTF---- 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +           ++   E+  + +   +     KAG   + +GV++  ++ L +
Sbjct: 244 NRKRMREFCQTVIDRRIKIKWDTESR-ADMSEEDVALMAKAGCTSVGIGVETGSKRMLEY 302

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  +  E                  ++ A+P +T+  +                  + 
Sbjct: 303 LNKGVDLDEMGRTFWRFVKHGIMPRLYIMLAVPTETVEDFTETQDMLHRMEDPPFMYMRF 362

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV----AVDLYNLTQSITSAHGLHAY--EISNHSFLGA 261
               GT  Y      + + P E++       +Y  T+   S          IS+ +   A
Sbjct: 363 VPYPGTPLYNQLVQDNRIKPPESLGEWAKFSVYFATKGNLSELSDEVINQAISHWAHSYA 422

Query: 262 ES------LHNLNY 269
                    HN  Y
Sbjct: 423 SRRVMFTLRHNPRY 436


>gi|331270008|ref|YP_004396500.1| MiaB-like tRNA modifying protein [Clostridium botulinum BKT015925]
 gi|329126558|gb|AEB76503.1| MiaB-like tRNA modifying enzyme [Clostridium botulinum BKT015925]
          Length = 433

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-I 84
           C   C YC   F       K  +        T +  +++L+       I  G    S  +
Sbjct: 152 CNNFCSYCLIPFARGAVCSKNPE--------TIIDEVKKLSEHGFKEVILSGIDISSYGV 203

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           + +    +L  +     +     + I    P   + +  +     K       L +QS  
Sbjct: 204 DLEGNWNLLKVLKAIDEIEGINRVRIGSIGPEFFDEDIIKEIGSLKKLCPHFHLSLQSGC 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
             +L+ + R +   E    I L R     +S   D+I   P +T  ++E          +
Sbjct: 264 NSTLKRMNRKYTTEEFRDIIVLLRKYVKDISITTDIIVGFPGETKEEFEETYNYLKEIKL 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + +++ +   GT   KM    D
Sbjct: 324 SKMHIFKYSPRTGTRAEKMENQVD 347


>gi|307610039|emb|CBW99573.1| hypothetical protein LPW_13431 [Legionella pneumophila 130b]
          Length = 434

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 18/226 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLI 84
           C  YC F      R +     F        Q   Q  G R I+ +      + G    ++
Sbjct: 144 CSKYCSFCVVPYTRGEEISRPFDDVLAECYQLASQ--GVREINLLGQNVNDYRG----IM 197

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +  +IA +   I     +     I     +P +   N    Y +     N + L VQS  
Sbjct: 198 DNGDIADLALLIHYIAAIDGIGRIRFTTSHPLAFSENLINAYAEVPELANHLHLPVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R + A E  + I   R I P +  S D+I   P +T   ++  +        
Sbjct: 258 DRILSLMKRGYTALEFKSKIRKLRKIRPDIRLSTDIIVGFPGETDKDFQDTMDLVHEIGF 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           D    +  +   GT    +  D  + +  + + +    L  +    
Sbjct: 318 DTSFSFIYSPRPGTPAANLPDDTPMEVKKQRLQILQNRLLMNAARY 363


>gi|306829788|ref|ZP_07462977.1| radical SAM protein [Streptococcus mitis ATCC 6249]
 gi|304428139|gb|EFM31230.1| radical SAM protein [Streptococcus mitis ATCC 6249]
          Length = 339

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 66  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HEKVEV 122

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 123 IRERYEQAIKEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTYEATSDLI 182

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 183 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLHL 242

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 243 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 286


>gi|297839059|ref|XP_002887411.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333252|gb|EFH63670.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 602

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ ++   T +    +     S  +  +G        
Sbjct: 207 CLGACTYCK-TKHARGHLGSYTVDSLVERVRTVISEGVKEIWLSSEDTGAYGRDI----- 260

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ----GYRKAGV-NRISLGVQSL 140
             N+ ++L+ I K      +  + I        + + +      R   V   + + VQS 
Sbjct: 261 GVNLPILLNAIVKELPSDQSTMLRIGMTNPPFILEHLKEIAAVLRHPCVYTFLHVPVQSG 320

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R + ASE    +     +    +++ D+I   P +T   +   ++    Y 
Sbjct: 321 SDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQTVELIKDYK 380

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + + Q     GT   KM
Sbjct: 381 FSQVHISQFYPRPGTPAAKM 400


>gi|296532216|ref|ZP_06894966.1| MiaB family RNA modification enzyme [Roseomonas cervicalis ATCC
           49957]
 gi|296267460|gb|EFH13335.1| MiaB family RNA modification enzyme [Roseomonas cervicalis ATCC
           49957]
          Length = 464

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 85/276 (30%), Gaps = 41/276 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C K C +C                + + L E + +    G R I+ +      + G  P 
Sbjct: 174 CDKFCSFC---VVPYTRGAEFSRPVAAILAEARRLVA-GGAREIALLGQNVNAWHGEAPD 229

Query: 82  -SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            S      ++ +L  +A+   ++     T  ++P  ++    + + +    +  + L VQ
Sbjct: 230 GSTWS---LSRLLYALAEIDGLARIRYTT--SHPRDMDDALIEAHGRIPQLMPFLHLPVQ 284

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H A          R   P   +S D I   P +T       +Q    
Sbjct: 285 SGSDKVLAAMNRGHKAELFYRIADRLREARPDMALSSDFIVGHPGETAADHAATMQLVEK 344

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                   ++ +   GT             P +    +     Q + +       E  N 
Sbjct: 345 VGFALAYSFKYSPRPGTPAAGQ--------PFQVPEAEKDARLQELQAVLRRQQDEF-NR 395

Query: 257 SFLGAE--------SLHNLNYWRYGDYI----GIGP 280
           + +G E          H         ++     IGP
Sbjct: 396 ACVGREVDILWTGPGRHPGQIAGRTPWLQPVHAIGP 431


>gi|228923507|ref|ZP_04086789.1| hypothetical protein bthur0011_44840 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228836145|gb|EEM81504.1| hypothetical protein bthur0011_44840 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 319

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGNRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|110597800|ref|ZP_01386083.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031]
 gi|110340525|gb|EAT59008.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031]
          Length = 448

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 70/220 (31%), Gaps = 14/220 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-P 86
           C   C YC       R +    + I +    M           ++ +  G    + I  P
Sbjct: 157 CDSGCSYCTIPLIRGRSRSLPPDEIVA--RAMILASSGYREIVLTGVNIGDYLENGIGLP 214

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           + +  +         +SS         P  V+    +    +   V  + + +QS  ++ 
Sbjct: 215 ELLRRLEKVPVSRIRISS-------IEPDVVDSEFIELVANSKTIVPHLHIPLQSGSDRI 267

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++ +     +    A      +  D++   P ++   +    +      + +L
Sbjct: 268 LKAMRRRYDTALYRERVSGVAAHISDCSIGADVMVGFPGESEEDFLQICRFIEELPLAYL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++  +I  GT   +     +L+  +         +   +
Sbjct: 328 HVFSCSIRPGTALARQTASRELIAVAPAEIARRSRVLNDL 367


>gi|13474043|ref|NP_105611.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Mesorhizobium loti MAFF303099]
 gi|14024795|dbj|BAB51397.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD
           subunit [Mesorhizobium loti MAFF303099]
          Length = 511

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 79/241 (32%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              Q +  L     +  I      P++ +  
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRDPK------KFAQEIAWLHREHGVELINLADENPTVSKKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             A +   IA+N  V     I        +  + +    YRKAGV R  LG+++ +EQ+L
Sbjct: 257 WRAFLDALIAENVPVL----IVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQTL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + +  + S    AI L R          +     +         ++ ++Y  D +   
Sbjct: 313 QLIRKGGSTSSDREAIRLLRKHGILSMATWVAGFEDEGFRDLWRGFRQLIAYDPDQIQAL 372

Query: 206 QLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +T  + T F+     +     D  L      V      +       +   E++  S   
Sbjct: 373 YVTPHRWTPFFRIARDRKVIQKDARLWDYKHQVLQMTRLKPWMLFFSVKLIELAVQSRPK 432

Query: 261 A 261
           A
Sbjct: 433 A 433


>gi|323699562|ref|ZP_08111474.1| Radical SAM domain protein [Desulfovibrio sp. ND132]
 gi|323459494|gb|EGB15359.1| Radical SAM domain protein [Desulfovibrio desulfuricans ND132]
          Length = 289

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 76/205 (37%), Gaps = 12/205 (5%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C   +++ +    +   +     ++ W+ +    +    +  G     ++  
Sbjct: 25  CSHGKCAFCG--AYLGKRFGIKPREV--VFGDIAWVARHCRDQRRVFLCDGDAV--ILPQ 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANP--SSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +  IL  I ++    + V     A       +       R  G+  + +G++S ++  
Sbjct: 79  VRLVEILTRIREDLPWVTRVGAYAGAKSLKRKTDAE-LAELRGLGLGIVYMGLESGDDAI 137

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHL 202
           LR +G+N +A+  +     AR    +++  +I  L    ++    E   +       D +
Sbjct: 138 LRAMGKNGDAACIVEQGRRARAAGLKLNVTVINGLGGVERSAIHAEATARALTRMDPDQV 197

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLP 227
               L +  GT  +   + G+ V P
Sbjct: 198 GALSLMLVPGTPLHDRFERGEFVPP 222


>gi|218194881|gb|EEC77308.1| hypothetical protein OsI_15965 [Oryza sativa Indica Group]
          Length = 629

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR----QLTGPRSISSIFFGGGTPS 82
           C+  C YC      +  +    ++ I+S +  ++ +     +     S  +  +G    +
Sbjct: 204 CLGACTYC----KTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGT 259

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGV 137
                N+  +L+GI        +  + I        + + +            + + + V
Sbjct: 260 -----NLPNLLNGIVAELPADRSTMLRIGMTNPPFILEHLKEIASVLCHPCVYSFLHVPV 314

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L  + R +  SE    +     +    +++ D+I   P +T   +   +    
Sbjct: 315 QSGSDAVLTAMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGETDEDFSQTVNLVK 374

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
            Y    + + Q     GT   +M
Sbjct: 375 QYQFPQVHISQFYPRPGTPAARM 397


>gi|167563483|ref|ZP_02356399.1| radical SAM domain protein [Burkholderia oklahomensis EO147]
          Length = 481

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 79/207 (38%), Gaps = 22/207 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++  +   ++S L E++W+R       +  
Sbjct: 200 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHR-YRTRSVESVLAEVKWIRDNMP--EVKE 256

Query: 74  IFFGGGTPSLIEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
           I F   T +  +P  + IA  L  +   W+ ++   +              +  ++ G+ 
Sbjct: 257 IMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLR 307

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G +S ++Q L  + +      A       R +  ++    I  LP +T    +  +
Sbjct: 308 LLLVGYESGDDQILLNIKKGLRTDIARRFNEDCRKLGIKIHGTFILGLPGETKDTIKKTI 367

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + A       + +       GT  Y+ 
Sbjct: 368 EYAKEINPHTIQVSLAAPYPGTRLYEQ 394


>gi|325473640|gb|EGC76830.1| radical SAM domain-containing protein [Treponema denticola F0402]
          Length = 311

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 13/218 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C+   +++   +     +     E+  ++ L G  S+S IF G G+   +  +++ 
Sbjct: 29  KCKFCNLFRNIKYRDLS----LSEIEEELIRVKNLNG--SLSKIFLGDGSAFNLRTEHLL 82

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IL+ I K         I ++A  + +        +     G+  + +GV+S  +  L F
Sbjct: 83  KILNLIHKY--FPDCNCINMDATITGILKKTDAELETLYTQGIRTLYIGVESGLDDVLLF 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLY 205
           + ++H  +EA  A+   +         ++  +    +++   E   +         +  +
Sbjct: 141 MNKDHTKAEAEKAVSKIQKHGYSFGAHIMTGIAGKGRSIENAEATAEFLNKTKPIRVINF 200

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            + + K    YK  K G     SE   +        + 
Sbjct: 201 SMFLHKEVPLYKDIKAGKYEAASEMENLKEEKRLLELL 238


>gi|302871917|ref|YP_003840553.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574776|gb|ADL42567.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 433

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   ++S   E++  +        I+ I          + 
Sbjct: 152 CDQFCSYC---IIPYARGAVRSRSLESIEEEVRRLVSNGYKEFVITGINISAYG---KDL 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                ++D I +   +     I + +  P  +               + + L +QS  ++
Sbjct: 206 DGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLSFDKLCHHLHLSLQSGSDK 265

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++  ++    +   +  +  ++F  D+I   P +T   +   ++         
Sbjct: 266 ILKLMNRHYTTAQYQGIVERIKEKWDDVAFTTDIIVGFPGETEEDFNDTVKFVQEIGFSR 325

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ + +KGT  Y M    D
Sbjct: 326 IHVFRFSPKKGTKAYDMPNQID 347


>gi|302335738|ref|YP_003800945.1| RNA modification enzyme, MiaB family [Olsenella uli DSM 7084]
 gi|301319578|gb|ADK68065.1| RNA modification enzyme, MiaB family [Olsenella uli DSM 7084]
          Length = 455

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 65/237 (27%), Gaps = 23/237 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  +  G+E   ++F   +    +L           G    S     
Sbjct: 166 CDNFCTYC-----IVPHVRGRERS-RAFERVVDECARLVADGVREITLLGQNVNSY---- 215

Query: 88  NIALILDGIAKNWTVSSNVEITIE------ANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
               +         + +  E  +E      +NP  +              +  + L VQS
Sbjct: 216 -GRDLYGEPRFAELLQAVGETGVERIRFTSSNPKDLSAETIAAMAGTPNVMPHLHLAVQS 274

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++     +  I   +   P +  S D+I   P +T   +   L      
Sbjct: 275 GSTRILKAMNRSYTREGYLDVIRDIKAAIPGIALSTDIIVGFPGETEEDFLDTLSLVEEV 334

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                  +  +   GT   +     D          D         +      Y+ S
Sbjct: 335 GFASAYTFIYSRRPGTPAAR--ITDDTPREVIQGRFDRLASLVERLAHEANVPYQGS 389


>gi|262190517|ref|ZP_06048761.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae CT 5369-93]
 gi|262033590|gb|EEY52084.1| tRNA-i(6)A37 methylthiotransferase [Vibrio cholerae CT 5369-93]
          Length = 474

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 211 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 330 FDMSFSFIFSPRPGTPAA----DYPCELSEEVKKERLYELQQQINSQAMRYS 377


>gi|229890688|sp|A1VF04|MIAB_DESVV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 449

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 18/216 (8%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQW 61
            + + GQG+    V+V+    C   C YC    + R  +  +      +  ++ L     
Sbjct: 137 RDAVLGQGAVPASVFVNIMQGCDNFCAYC-IVPYTRGRQKSRATGTILDECRALLDRGAR 195

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
              L G    S      G  +       A +L  +A    +     +T   +P  +    
Sbjct: 196 EITLLGQNVNSFGQDSHGDGTTF-----AQLLHKVAALPGLERLRFVT--PHPKDIAPEV 248

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
            + +        R+ L +Q+  ++ L+ +GR ++ +  +  +   R   P +  S D+I 
Sbjct: 249 VEAFGTLPNLCPRLHLPLQAGSDRILKLMGRRYDMARYLRIVDDLRAARPDIVLSSDIIV 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             P +T   +   +    +        +  +   GT
Sbjct: 309 GFPGETEEDFMETMGALETVGYAASYSFCYSDRPGT 344


>gi|154497029|ref|ZP_02035725.1| hypothetical protein BACCAP_01322 [Bacteroides capillosus ATCC
           29799]
 gi|150273428|gb|EDN00556.1| hypothetical protein BACCAP_01322 [Bacteroides capillosus ATCC
           29799]
          Length = 471

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 76/205 (37%), Gaps = 20/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C   C YC    +VR  +  ++   +  L E++ + +  G + I+ +      +G   P 
Sbjct: 189 CNNFCSYC-IVPYVRGRERSRDP--EGILAEVEELAK-AGYKEITLLGQNVNSYGKDLP- 243

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             EP + A +L    K   V  +  I  + ++P       F    +       I L VQ+
Sbjct: 244 --EPMDFADLL---RKVNAVPGDFLIRFMTSHPKDATEKLFDAMAECEKVAPVIHLPVQA 298

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R +     +  +   R   P +    D+I   P +T  ++E  +      
Sbjct: 299 GNNRVLKAMNRVYTREIYLEKVRQLRQRIPDIVLTSDIIVGFPGETTEEFEDTMSLLREV 358

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG 222
             D L  +  +  +GT   KM    
Sbjct: 359 EYDALFTFIYSPREGTPAAKMPDPM 383


>gi|83596005|gb|ABC25364.1| tRNA-i(6)A37 thiotransferase enzyme [uncultured marine bacterium
           Ant29B7]
          Length = 484

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 25/211 (11%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGG---- 79
           C   C +C   F     R +  Q   ++         ++  L G    S +++GGG    
Sbjct: 183 CDNMCSFCVVPFTRGRERSRNPQTIVVECQKLWADGYKEVTLLGQNVDSYLWYGGGLKKD 242

Query: 80  --TPSLI---EPQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAG-- 129
               S +        + +L  +A         EI I    +NP  +  +  +   +    
Sbjct: 243 FKVASDMAKASALQFSHLLHMVANALP-----EIRIRFATSNPQDMSDDVLRAIAEHKNI 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
              I L VQS   + L+ + R H+ ++ I  I   + I P   +S D++   P +T    
Sbjct: 298 CKYIHLPVQSGSSRILKAMNRGHDRADYIDLIDRVKRIIPNCAISQDIMSGFPTETEEDH 357

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              L        +   ++  +    T+  + 
Sbjct: 358 NETLSLMSQVRYNFGYMFAYSERPNTMAARK 388


>gi|27375587|ref|NP_767116.1| hypothetical protein bll0476 [Bradyrhizobium japonicum USDA 110]
 gi|27348724|dbj|BAC45741.1| bll0476 [Bradyrhizobium japonicum USDA 110]
          Length = 417

 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + + +++ + +      + +      +G   P  
Sbjct: 148 CDHRCTFC---IIPFGRGNSRSVPMGAVVEQVRALAERGHAEIVLTGVDLTSYGADLP-- 202

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                + ++   I ++      + I+   +    + +           +  + L +QS +
Sbjct: 203 -GAPKLGMLTKQILRHVPELKRLRIS-SIDSIEADNDLLDAIADDARLMPHLHLSLQSGD 260

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   +AIA     R + P +    D+I   P +T   +   L       +
Sbjct: 261 DMILKRMKRRHLRGDAIAFCDQVRRLRPDVAFGADIIAGFPTETEAMFSRSLDLVEECGL 320

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   +M +
Sbjct: 321 TFLHVFPYSPRPGTPAARMPQ 341


>gi|330811908|ref|YP_004356370.1| (Dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380016|gb|AEA71366.1| (Dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 442

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVIAEIIHLAEHGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
               L     +A + + I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YR-GLTHDGRLADLAELIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH A E  + +   R   P +    D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGICISSDFIVGFPGETEKDFQQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +    + L Q 
Sbjct: 325 IEDVGFDFSYSFVYSQRPGTPAADLADDTPEELKKERLNALQHRLNQQ 372


>gi|299142064|ref|ZP_07035198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris C735]
 gi|298576526|gb|EFI48398.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris C735]
          Length = 444

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 63/201 (31%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C   C YC     +  Y  G+E       + +  ++ L           G      G  P
Sbjct: 156 CNNFCHYC-----IVPYTRGRERSRD-VESILAEVKDLHDKGFKEVTLLGQNVNSYGLLP 209

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +   P+N     + + K      ++ +     NP  +  +      +       I    Q
Sbjct: 210 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDILHAIAEEPNLCKHIHFPAQ 269

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R +   E +  +   + I P      D+      +T    ++ L     
Sbjct: 270 SGSDKILKLMNRKYTREEYLDKVAAIKRIIPGCGLTTDIFVGYHDETEEDQQLTLSLVKE 329

Query: 197 YAVDHLSLYQLTIEKGTLFYK 217
              D   +++ +   GT   K
Sbjct: 330 VGFDSAFMFKYSERPGTYAAK 350


>gi|221065180|ref|ZP_03541285.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
           KF-1]
 gi|220710203|gb|EED65571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
           KF-1]
          Length = 442

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F    +       Q         +++++     G  S
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLAEQGVKEITLLGQNVNAYLGKMGDTS 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P+       + Y +    V+ + L VQ  
Sbjct: 213 --EMADFALLLEYVAEIPGIERIRYTT--SHPNEFTPRLIEAYARIPQLVSHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I    A      MS D I   P +T   ++  ++      
Sbjct: 269 SDKILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEEDFQKMMKLIHDVR 328

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 329 FDNSFSFIFSPRPGTPAANLH 349


>gi|300722332|ref|YP_003711617.1| hypothetical protein XNC1_1347 [Xenorhabdus nematophila ATCC 19061]
 gi|297628834|emb|CBJ89412.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Xenorhabdus nematophila ATCC 19061]
          Length = 476

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G T  
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGATF- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                +I    + +     +     I     +P     +    Y      V+ + L VQS
Sbjct: 214 ---DGDICTFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIAVYEDTPELVSYLHLPVQS 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E    I   R   P +  S D I   P +T   +E  ++     
Sbjct: 271 GSDRILTLMKRAHTALEYKGIIRRLRKARPDILISSDFIIGFPGETQDDFEKTMKLIADV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D    +  +   GT    +  D +     + + +    + Q   S 
Sbjct: 331 NFDMSFSFIYSARPGTPAADLPDDVNEEEKKQRLYLLQQRINQQAMSF 378


>gi|257452434|ref|ZP_05617733.1| MIAB protein [Fusobacterium sp. 3_1_5R]
 gi|317058977|ref|ZP_07923462.1| adenosine tRNA methylthiotransferase [Fusobacterium sp. 3_1_5R]
 gi|313684653|gb|EFS21488.1| adenosine tRNA methylthiotransferase [Fusobacterium sp. 3_1_5R]
          Length = 435

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVRDVDQYVKKGAKEIMLLGQNVNSYGHDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                 A +L  I K       +   +  +P     +  +   K       + L +QS  
Sbjct: 208 KNGDTFAKLLTEICKVEG--DFIVRFVSPHPRDFTDDVIEVIAKEDKIAKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS-----FDLIYALPKQTMTQWEMELQRALS 196
            Q L+ + R +   + +A   LA  I  ++S      D+I   P +T   +   L+    
Sbjct: 266 SQILKRMNRGYTKEQYLA---LAHKIQDKISGVALTTDIIVGFPGETEEDFLDTLEVVRE 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              D+  ++  +I +GT    M +     +  E +   +    +        + 
Sbjct: 323 INYDNAFMFMYSIRQGTRAATMKEQIPEDIKKERLQRLMDVQARCSYKESQKYQ 376


>gi|269213889|ref|ZP_06158241.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria cinerea ATCC
           14685]
 gi|269145278|gb|EEZ71696.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria cinerea ATCC
           14685]
          Length = 518

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   LTE+  + Q  G + I+ +      + G    
Sbjct: 233 CSKYCSYC---VVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE--- 285

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +E   I      +     +     +     +P        + YR     V+ + L +QS
Sbjct: 286 -MENGEICDFATLLRIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQS 344

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R + A E  + I    A      +S D I   P +T  ++E  L+     
Sbjct: 345 GSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDI 404

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           A D   ++  +   GT    +H
Sbjct: 405 AFDLSFVFIYSPRPGTPAANLH 426


>gi|218245870|ref|YP_002371241.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 8801]
 gi|257058918|ref|YP_003136806.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 8802]
 gi|218166348|gb|ACK65085.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 8801]
 gi|256589084|gb|ACU99970.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Cyanothece sp. PCC 8802]
          Length = 479

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 69/191 (36%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  ++  +    ++   EM   + L G  SI   FF   T ++    
Sbjct: 207 CPAKCTFCLWPQTIGGHQ-YRAKTPEAVGKEMALAKSLWGD-SIREYFFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++        ++        AN   ++ +  +  +  G+  + +G +S  +  L  
Sbjct: 261 DKKRVIAISEHLKKLNLTWSCNARAN---LDYDTLKILKDNGLRLLLVGFESGNQTVLDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +     +  ++    I  LP +T    E  ++ A   +   + +   
Sbjct: 318 VKKGIKLEVARKFMENCTKLGIKVHGAFIIGLPNETKKTIEDTIRFACEVSPHTIQVSIA 377

Query: 208 TIEKGTLFYKM 218
           +   GT  Y+ 
Sbjct: 378 SPYPGTELYQQ 388


>gi|77919320|ref|YP_357135.1| biotin synthase [Pelobacter carbinolicus DSM 2380]
 gi|77545403|gb|ABA88965.1| iron-only hydrogenase maturation protein HydE [Pelobacter
           carbinolicus DSM 2380]
          Length = 348

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 66/194 (34%), Gaps = 21/194 (10%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     NS + RY++ +E  +      + +         +       G    +
Sbjct: 49  CSRDCHYCGLRAGNSKLTRYRMSEEEIMCCVEEGVAY----GYGTLVLQSGEDYG----L 100

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +   +  ++  I +   ++      +  +       +   +R AG +R  L  ++ + + 
Sbjct: 101 DVDWMTKLIQRIKRETPLA------VTLSLGERSAEDLTAWRDAGADRYLLRFETSDPEL 154

Query: 145 LRFLGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            R +      H  +  I  + + + I       ++  +P QT      +++      +D 
Sbjct: 155 YRRIHPALPGHKPNR-IELLRIIKKIGYETGSGVMVGIPGQTYEDLAKDIETFRELDLDM 213

Query: 202 LSLYQLTIEKGTLF 215
           + +        TL 
Sbjct: 214 IGVGPFIPHHETLL 227


>gi|333029245|ref|ZP_08457306.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011]
 gi|332739842|gb|EGJ70324.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011]
          Length = 438

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--GTPSLIE 85
           C   C YC   +        +   I+S + + +   +  G   + +    G  G  +   
Sbjct: 159 CDYFCTYC---TIPFARGFSRNGSIESIVNQAKQAARDGGKEIVITGVNTGDFGKTTNET 215

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
             ++  +LD +                 P+ +     +     K  +    + +QS  + 
Sbjct: 216 FIDLVKLLDEVEGIERFR-----ISSIEPNLLTDEIIEFVAQSKRFMPHFHIPLQSGSDD 270

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++ +     +   + + P   +  D+I     +T T ++  L    S  +  
Sbjct: 271 VLKLMHRRYDTALFAHKVEKIKALVPHAFIGVDVIVGTRGETQTFFDKSLDFIESLDITQ 330

Query: 202 LSLYQLTIEKGTL 214
           L ++  +   GT+
Sbjct: 331 LHVFSYSERPGTM 343


>gi|223984231|ref|ZP_03634378.1| hypothetical protein HOLDEFILI_01672 [Holdemania filiformis DSM
           12042]
 gi|223963800|gb|EEF68165.1| hypothetical protein HOLDEFILI_01672 [Holdemania filiformis DSM
           12042]
          Length = 460

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 97/321 (30%), Gaps = 47/321 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC            +  ++   + ++    +      +  +       S     
Sbjct: 165 CDNRCSYCA-------IPGIRGGYVSFPIEDLVAEAKQLASEGVKELVVIAQDTSRYGTD 217

Query: 88  NI--ALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 I D + +   +   +    +   P  ++     G +     +    + VQ   +
Sbjct: 218 LYGRRRIWDLLTELNAIDGLHWIRVLYLYPDEIDDEFVTGIKDLKKVIPYFDIPVQHGSD 277

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R  +    +  + L R     P +   +I   P++T   ++M +        D
Sbjct: 278 KMLKLMNRRGSVESILRTVKLIRENYDMPVLRTTMIVGFPQETEEDFQMLIDFIKEVRWD 337

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS---NHS 257
            L  +  + E+ T  Y M                   +             +I+     +
Sbjct: 338 RLGAFTFSNEEDTPAYTM------------DGQISQEIMDERLERLMTVQNQIAQENGEA 385

Query: 258 FLGA------ESLHNL-NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPE----SWLK 306
            +G       E+   L  Y+        G G HS        +      H +    +W+K
Sbjct: 386 LIGKTLEVLVENQDGLTGYYH-------GRGIHSAPDGIDGLIKFKSSHHYQPGTFAWVK 438

Query: 307 MVRKNGHAVVEKEFLSSEQQA 327
           + +   H ++  + L +E+ A
Sbjct: 439 VTKAKHHDLIGIDVLDAEEIA 459


>gi|254167353|ref|ZP_04874205.1| MiaB-like tRNA modifying enzyme, archaeal-type [Aciduliprofundum
           boonei T469]
 gi|197623616|gb|EDY36179.1| MiaB-like tRNA modifying enzyme, archaeal-type [Aciduliprofundum
           boonei T469]
          Length = 386

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 15/203 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            P    C+ +C YC   + + R +V    ++  ++     ++         +  +  +G 
Sbjct: 100 IPIANGCLGQCTYC--ITRLARGRVKSRSKDWILRLVKKALEQGAVEIRISAQDTAAYGR 157

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGV 137
              + +  + I  I     K +     +E         +       Y    V   + L V
Sbjct: 158 DIGTEL-AELINSITAIPGKFYLRVGMMEPRETLR---ILPELIDAYSNPKVYKFLHLPV 213

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS +++ L  + R +   + I  +   R  FP   +S D+I   P +    +E  ++   
Sbjct: 214 QSGDDEILHRMNRGYKVEDFIKIVRNFRQRFPEMTLSTDIIVGFPGENDESFENTMKLIK 273

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               + L++ + +    T  YK 
Sbjct: 274 EIKPEILNITRFSPRPKTPAYKW 296


>gi|169829242|ref|YP_001699400.1| hypothetical protein Bsph_3790 [Lysinibacillus sphaericus C3-41]
 gi|168993730|gb|ACA41270.1| UPF0004 protein [Lysinibacillus sphaericus C3-41]
          Length = 432

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  L + Q +        + +    GG    ++  
Sbjct: 141 CNNFCTFC---IIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGGYGQDLKDY 197

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N+A +L D  A    +      +IEA+   +        R++   VN + + +QS  +  
Sbjct: 198 NLAQLLRDLEANVTGLKRLRISSIEAS--QLTDEVIDVLRESKIVVNHLHIPIQSGSDTV 255

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +       P ++   D+I   P +T  ++         +    L
Sbjct: 256 LKRMRRKYTMEFFGERLTKLHEALPDLAVTSDVIVGFPGETEEEFMDTYNFIRDHKFSEL 315

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +E V   +     L +   S       E+
Sbjct: 316 HVFPFSPRTGTPAARMEDQIDEDIKNERVHRLISLNDQLAKEYASRFEDQVLEV 369


>gi|166030899|ref|ZP_02233728.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC
           27755]
 gi|166029166|gb|EDR47923.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC
           27755]
          Length = 440

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 19/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C K C YC     + + +    N+    + ++    +    + +  +       +     
Sbjct: 154 CDKHCTYC----IIPKLRG---NYRSVPMEKLLAEAKDLADQGVKELILVAQETTVYGKD 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   +++  +L  + K   +       +   P  +     Q  ++     + + L +Q  
Sbjct: 207 LYGEKSLHKLLRELCKISGIQWIR--ILYCYPEEIYDELIQTIKEENKVCHYLDLPIQHA 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR  + ++ +  I   R   P +S    LI   P +T  Q E          
Sbjct: 265 SDAVLKRMGRRTSKAQLVEIIEKLRKEIPDISLRTTLITGFPGETQEQHEELKDFVDEME 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            D L ++  + E+ T    M  +       E+   +L  L Q I
Sbjct: 325 FDRLGVFTYSPEEDTPAATM-TEQIPEEVKEDRQAELMELQQEI 367


>gi|295109219|emb|CBL23172.1| radical SAM protein, TIGR01212 family [Ruminococcus obeum A2-162]
          Length = 321

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF        +   + I S +  ++  R +         +F   T +   
Sbjct: 57  CIFCSAGGSGDF---AADAALSITDQIDSQIEMLRAKRPIHK----YIAYFQAYTNTYAP 109

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +  I     ++ +V   V ++I   P  +         +    +   I LG+Q++ E
Sbjct: 110 VEYLRKIFTEAIRHPSV---VALSIGTRPDCIGDEVLVLLDELNQIKPVWIELGLQTIHE 166

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++  ++ R +  S     +H  R+   ++    I  LP ++       +       +  +
Sbjct: 167 RTAAYIRRGYPLSCFEETVHRLRSHGIQVIVHTILGLPGESDADILKTMDYLNGRDIQGI 226

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L  L + +GT     +  G   +      ++L            +  
Sbjct: 227 KLQLLHVLRGTDLADDYLAGKFHVYEREEYLNLLIKCLEHLDPSIVIH 274


>gi|297545075|ref|YP_003677377.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842850|gb|ADH61366.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 349

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  IQ          +      + +I    G    
Sbjct: 64  YCNNTCFYCGLRGPNRTIKRYRMEPEEIIQC--------AKYGAAAGLKTIVLQSGEDKY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        ++ I  +   +   ++   +KAG +R  L +++  ++
Sbjct: 116 FKINTLCKIIEEIKKL-------DMAITLSIGELTTKDYAELKKAGADRYLLRIETTNKE 168

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   + +   +    +  LP QT+     +L        D L 
Sbjct: 169 LYQKLHPGMSYENRVRCLMDLKELGYEVGTGSLVGLPGQTLEMLADDLIFFKKIDADMLG 228

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 229 IGPFIPCENTPLER 242


>gi|206895107|ref|YP_002247157.1| 2-methylthioadenine synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206737724|gb|ACI16802.1| 2-methylthioadenine synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 424

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 78/224 (34%), Gaps = 24/224 (10%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFF 76
           YV     C  +C YC   +  + +   +       + E+  + ++     I     +  +
Sbjct: 128 YVSIAEGCNGRCSYC---TIPKFWGSLKSRPAVEIVDEINELYEIGIREVILVSQDTGAW 184

Query: 77  G---GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
           G    G PSL     +  + D       +          NP+ +       ++  G  + 
Sbjct: 185 GTDLYGRPSL--ELLLRALRDTQIPWIRLMY-------VNPTFITEKLLLAWKDTGRVLP 235

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEM 189
              + VQS  ++ LR + R ++ ++ + A+ L   +F   +    ++   P +T    + 
Sbjct: 236 YFDIPVQSGSDKVLRQMRRGYDRNQILQALKLIDGVFAENTKRTSIMVGFPGETEDDVQA 295

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            L   +     H+ ++    E+    +K+    D  + +     
Sbjct: 296 TLDLLIQGEFHHVGVFGYCDEEEADSHKLVPKVDPEIINTRKTA 339


>gi|15895113|ref|NP_348462.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|81530267|sp|Q97I18|MIAB_CLOAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|15024813|gb|AAK79802.1|AE007692_10 Predicted Fe-S oxidoreductase, YMCB B.subtilis ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|325509252|gb|ADZ20888.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
          Length = 441

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E   +    +++  +++L           G    S    
Sbjct: 160 CNNFCTYC-----IVPYVRGRERSRKP--EDIENEIKELVKKGYKEITLLGQNVNSYGKS 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           ++ +    +L  + +   +   + I  + ++P  +  +              I L VQS 
Sbjct: 213 LDEEMNFALL--LRRLNNIEGLLRIRFMTSHPKDLTDDVIAAIADCDKVCEHIHLPVQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L  + RN+   + I  ++  ++    ++   D+I   P +T   +E  L       
Sbjct: 271 STTILNKMNRNYTREDYINLVNKIKSGIKNVAITTDIIVGFPGETEEDFEDTLSLVKEVE 330

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D    +  +I +GT   K
Sbjct: 331 YDSAFTFLYSIREGTPAAK 349


>gi|332799240|ref|YP_004460739.1| 30S ribosomal protein S12 methylthiotransferase rimO
           [Tepidanaerobacter sp. Re1]
 gi|332696975|gb|AEE91432.1| Ribosomal protein S12 methylthiotransferase rimO [Tepidanaerobacter
           sp. Re1]
          Length = 441

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 24/206 (11%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC       S+  R     +  ++  +     E+  + Q T    +       G
Sbjct: 154 CDNYCSYCAIPFIRGSYRSRKIEAIKEEVKILVAQGVKEINLVAQDTTNYGVDI----YG 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            PSL  P+ +  ++    +           + A P+++          +    N + + +
Sbjct: 210 RPSL--PELLQELIKIDGEYLIR------ILYAYPTNINKELLDVMLSSKKIANYLDIPL 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ LR +GR  N+   I  I   R+  P ++     I   P +T  ++E  L    
Sbjct: 262 QHFNDRILRLMGRPTNSQSIITLIDNIRSRLPEITLRTTFIVGFPTETEAEYEQLLDFIR 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
            Y  D + +++ + E+ T+   +   
Sbjct: 322 EYKFDKVGVFKYSQEEDTVAAALMPQ 347


>gi|254518915|ref|ZP_05130971.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp.
           7_2_43FAA]
 gi|226912664|gb|EEH97865.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp.
           7_2_43FAA]
          Length = 444

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 16/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     V  Y  G+E   +S    +  ++ L           G    S    +
Sbjct: 163 CNNFCTYC-----VVPYVRGRERSRKS-EDIINEIKDLVSKGYKEITLLGQNVNSYGKGL 216

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E   + A +L  I +   +       + ++P  +  +     ++      +I L VQS  
Sbjct: 217 EEDIDFAKLLRKINEVDGLERVRF--MTSHPKDLNKDVILAIKECDKLCEQIHLPVQSGS 274

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++     +  + + +   P +S   D+I   P +T   +   L        
Sbjct: 275 DRILKKMNRHYTKEYYLELVDMIKREIPDVSLTTDIIVGFPGETEEDFLDTLDLVERVGY 334

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +    T 
Sbjct: 335 DSAFTFIYSRRNNTP 349


>gi|170289794|ref|YP_001736610.1| magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173874|gb|ACB06927.1| Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 483

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 76/189 (40%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S ++   + + + ++  + E++ +R+  G R I  +         +  +
Sbjct: 204 CPFNCIFCS--SSLQFGSIWRAHSVRRVVEELRLLREDFGIREIEFLD----DTFTLNRK 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I D I +      ++  +  +  ++++       R+AG + + LG++S  ++ L F
Sbjct: 258 RAREICDEIVREGI---DLSWSASSRVNTLDRETADSMRRAGAHTVYLGIESGTQRVLDF 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +G+    ++A+ A+  A     +     +   P +     E  +  A S  + +      
Sbjct: 315 IGKGITVTQAVDAVKTALKSGLQALGSFVIGFPIERKEDIERTIGFAKSLGLKYAQFTVA 374

Query: 208 TIEKGTLFY 216
           T   GT  +
Sbjct: 375 TPYPGTRLW 383


>gi|163851835|ref|YP_001639878.1| radical SAM domain-containing protein [Methylobacterium extorquens
           PA1]
 gi|163663440|gb|ABY30807.1| Radical SAM domain protein [Methylobacterium extorquens PA1]
          Length = 459

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 68/215 (31%), Gaps = 21/215 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C++ +          ++I     E+   R L  P              L++  
Sbjct: 209 CPLSCRFCEWGTKENSKASFSADYIA---RELDAFRTLEAPAVF-----------LLDAG 254

Query: 88  NIALI-----LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
               I     L    +         +  E  PS V   +     + G   + +G+QS++ 
Sbjct: 255 LNLNIGAFRNLRLANQRSGFLKETLLWAEIYPSIVRDEHLAFIEEIGTAYLGVGMQSMDP 314

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             LR   R  ++    AA+  A      +   +I  LP  T   +   L  ALS     +
Sbjct: 315 AVLRLHDRPSDSPRFEAAVR-ALARVTNIELQIIAVLPGDTPEGFFRTLDYALSL-PASV 372

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +Y   +    L  +   + ++      + +    
Sbjct: 373 RVYHCLVLPDALLTRSRPEWNVRFDPHTLTMRSCE 407


>gi|163852619|ref|YP_001640662.1| RNA modification protein [Methylobacterium extorquens PA1]
 gi|229890613|sp|A9VYZ9|MIAB_METEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|163664224|gb|ABY31591.1| RNA modification enzyme, MiaB family [Methylobacterium extorquens
           PA1]
          Length = 446

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 76/228 (33%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              + + + E + + +  G R I+ I      + G  P 
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRSVAAVVDEARRLVE-GGVREITLIGQNVNAYHGNGPD 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              P  +  ++D ++    +      T  ++P+    +    +      +  + L VQS 
Sbjct: 213 G-APATLGHLMDALSAVPGLLRLRYTT--SHPNDFADDLIAAHATNPLVMPYLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H        I   RN  P +  S D I   P +T   +   ++      
Sbjct: 270 SDRILHAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETMRLVSDIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                 ++ +   GT   +        + +E +A     L +   + +
Sbjct: 330 FSAAFSFKYSPRAGTPAAEREDAVPEAVKTERLAALQDLLDRQRHAYN 377


>gi|148380588|ref|YP_001255129.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum A
           str. ATCC 3502]
 gi|153932321|ref|YP_001384875.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum A
           str. ATCC 19397]
 gi|153937563|ref|YP_001388345.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum A
           str. Hall]
 gi|148290072|emb|CAL84191.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152928365|gb|ABS33865.1| putative cobalamin-dependent enzyme [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933477|gb|ABS38976.1| putative cobalamin-dependent enzyme [Clostridium botulinum A str.
           Hall]
          Length = 559

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + + I+    E++++      +++  I F   T +    +
Sbjct: 183 CPFKCKYC----LSSTLHGVRFHDIERVKKEIKFLV----DKNVKLIKFVDRTFNC-NHK 233

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
               I + I     + ++     E +   +     +   K    RI    GVQ+   + L
Sbjct: 234 FAMRIWEYI---LNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVL 290

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R+ N       +   +N+   +   DLI  LP +    ++       S   + + L
Sbjct: 291 KNINRHVNFETIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQL 350

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L + KG+      +  +      P   +        + + 
Sbjct: 351 GFLKLLKGSPMRLEAEKWRMVYSPYPPYEILSTKDISYEELL 392


>gi|146295548|ref|YP_001179319.1| biotin synthase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409124|gb|ABP66128.1| iron-only hydrogenase maturation protein HydE [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 358

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N   +RY++ ++  ++             G R++  +   G  P  
Sbjct: 67  YCKNDCFYCGLRRSNKEAQRYRMQEDEIVEVAKRAYDM-----GYRTV--VLQSGEDP-Y 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+        +   V++ I  +        ++ +R+AG +R  +  ++   +
Sbjct: 119 YTKDKVCSIIK------KIKEEVDVAITLSIGERSYEEYKAFREAGADRYLMRFETSNRE 172

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +      +    I  +   +++   +    +  LP QT+     ++        D + 
Sbjct: 173 LYQKYHPGMSFENRIECLRWIKSLGYELGTGFLIGLPGQTIDDLANDILLVYELDSDMIG 232

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 233 IGPFIPHPHTPL 244


>gi|194335608|ref|YP_002017402.1| MiaB-like tRNA modifying enzyme [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308085|gb|ACF42785.1| MiaB-like tRNA modifying enzyme [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 453

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 76/221 (34%), Gaps = 16/221 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C   C YC     +   + G  +   + + E   +   +G R I  + +  G      ++
Sbjct: 162 CDNGCSYCA----IPLIRGGSRSLPAAHIVERAHLLASSGYREIVLTGVNTGDYRSGGLK 217

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            + +  +L+ ++ +    S++E      P  V+         +   V    + +QS  ++
Sbjct: 218 LKELLRMLEEVSISRIRISSIE------PDIVDRELIALVAGSKKIVPHFHIPLQSGSDR 271

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R+++ +     + ++        +  D++   P +T   +           +  
Sbjct: 272 ILRAMRRHYDTALYRDRVLMSVENIADCAIGADVMVGYPGETEEDFLKMYHFIEELPLAS 331

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           L ++  +I  GT       + +            Y+    +
Sbjct: 332 LHVFSCSIRPGTRLALQITNSERKPVESAEIARRYSELAEL 372


>gi|326333227|ref|ZP_08199474.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Nocardioidaceae bacterium
           Broad-1]
 gi|325948871|gb|EGD40964.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Nocardioidaceae bacterium
           Broad-1]
          Length = 500

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 78/234 (33%), Gaps = 25/234 (10%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C            ++      L E+
Sbjct: 138 LESLEVFPSTLPTKRESAYAAWVSVSVGCNNTCTFC---IVPSLRGKEKDRRPGEILAEI 194

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       + Q  + +L    +   +         
Sbjct: 195 EALVAEGVTEVTLLGQNVNAYGVEFG-------DRQAFSKLLRACGEIEGLERVRF--TS 245

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P+    +  +   +    +  + + +QS  ++ L+ + R++ +++ +  I   R   P
Sbjct: 246 PHPAEFTDDVIEAMAETPNVMPSLHMPLQSGSDRVLKAMRRSYRSTKFLGIIERVREAIP 305

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
              ++ D+I   P +T   ++  L             +Q +   GT    +   
Sbjct: 306 HAAITTDIIVGFPGETEEDFQATLDVVRESRFASAFTFQYSKRPGTPAADLPDQ 359


>gi|313893987|ref|ZP_07827553.1| iron-only hydrogenase maturation rSAM protein HydE [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441551|gb|EFR59977.1| iron-only hydrogenase maturation rSAM protein HydE [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 372

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G  S  +  
Sbjct: 65  CIKNCNYCG----IRRENDKTERF-DMNREDIIKMAQWAYDHEYGSITLQSGERS--DDI 117

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++D I     +  +  + I           ++  R+AG +R  L +++  ++    
Sbjct: 118 FVDYVVDLIRDIKAI-GDGSLGITMCVGEQSEEAYRRMREAGASRYLLRIETTNKELYHK 176

Query: 148 LGR---NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 177 IHPQDELHSFETRVECLRRLRRVGFQVGTGVMIGLPGQTEEDLVNDILFYRDMDIDMIGM 236

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 237 GPYVVHHDTPLGQ 249


>gi|303326347|ref|ZP_07356790.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302864263|gb|EFL87194.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 192

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 7/126 (5%)

Query: 26  PF--CVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           PF  C  +C +C  +    R    +      + +         +       + + F GGT
Sbjct: 69  PFRGCPTRCVFCAQDVQTGRTDKSEATPGRILDTARAA--LDLRAARGLPPAELAFYGGT 126

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
            + +        L+  A                P  ++       R++G   + LGVQS 
Sbjct: 127 FTALPETERDACLEFAAAALARGQITAFRCSTRPDCLDAALLARLRQSGCAAVELGVQSF 186

Query: 141 EEQSLR 146
            + +LR
Sbjct: 187 ADAALR 192


>gi|223985672|ref|ZP_03635720.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
           12042]
 gi|223962363|gb|EEF66827.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
           12042]
          Length = 439

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 23/201 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGG----TP 81
           C + C YC     +  Y  G+E  +     L E + + Q      ++ I  G        
Sbjct: 160 CNQFCAYC-----IIPYARGRERSLPLDEALKEARRLAQKHKEIVLAGIHTGRYGKDRDT 214

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           S      +  ++ G+ +   +      +IE     +                 + + +Q+
Sbjct: 215 S------LCDLIRGMCEIEPLERIRISSIEIT--EITDELLTLMETQPKIARHLHIPLQA 266

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             + +L+ +GR +  ++ +A +   R     +S   DLI   P+++  ++   +      
Sbjct: 267 GCDATLKRMGRPYTTAQFMARVEEIRTRIDGISISTDLIVGFPQESEAEFAATMAFLKQI 326

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
               + ++  + + GT   +M
Sbjct: 327 QFSFIHVFPFSPKTGTPAQRM 347


>gi|89052810|ref|YP_508261.1| MiaB-like tRNA modifying enzyme [Jannaschia sp. CCS1]
 gi|88862359|gb|ABD53236.1| MiaB-like tRNA modifying enzyme [Jannaschia sp. CCS1]
          Length = 419

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 76/203 (37%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPR----SISSIFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +            +    +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDMTSWGADLP 201

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +     ++   IL  +     +  +   +IE     V+    Q        +  + L +Q
Sbjct: 202 AAPRLGDLVMRILKLVPDLPRLRISSIDSIE-----VDDALMQAIATEPRLMPHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AIA    AR + P ++F  D+I   P +T   ++  ++    
Sbjct: 257 HGDDLILKRMKRRHLRDDAIAFCEEARRLRPEITFGADIIAGFPTETEAHFQNSVKLVEE 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
             +  L ++  +  +GT   +M 
Sbjct: 317 CDLTWLHVFPYSPREGTPAARMP 339


>gi|169830740|ref|YP_001716722.1| RNA modification protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229890512|sp|B1I241|MIAB_DESAP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169637584|gb|ACA59090.1| RNA modification enzyme, MiaB family [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 443

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 28/229 (12%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSI-----F 75
           +H   C   C YC     V  Y  G+E      + + E+  +    G R ++ +      
Sbjct: 158 IH--GCNNFCTYC-----VVPYVRGRECSRRPDAVVDEVCGLAA-AGYREVTLLGQNVNS 209

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
           +G      I+   +   LDG+   W +         ++P        +   +A      I
Sbjct: 210 YGRDLGEGIDFAALLARLDGVEGLWRIR-----FTTSHPRDFTDRLIEVVARAAKVCEHI 264

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L  Q+   + L+ + R +   + +  +   R   P +S   DL+   P +T   +   L
Sbjct: 265 HLPAQAGSNRVLQRMNRGYTREDYLDLVARIRAAVPDVSLTTDLMVGFPGETEEDFADTL 324

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
                   D    +     +GT            +P +  +  +  L Q
Sbjct: 325 DLVRRVGYDQAFTFVYNPRRGTPAAGWPD----QVPEDVKSRRIQELIQ 369


>gi|148379959|ref|YP_001254500.1| radical SAM domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153932950|ref|YP_001384257.1| radical SAM domain-containing protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937493|ref|YP_001387796.1| radical SAM domain-containing protein [Clostridium botulinum A str.
           Hall]
 gi|148289443|emb|CAL83540.1| putative radical SAM superfamily protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928994|gb|ABS34494.1| radical SAM domain protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152933407|gb|ABS38906.1| radical SAM domain protein [Clostridium botulinum A str. Hall]
          Length = 289

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 93/237 (39%), Gaps = 18/237 (7%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ 
Sbjct: 25  CSHNKCSFCS----MYKNEKFRVRELKEIFEDLEESKSYY--RRINRIFLADGDALCLKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L
Sbjct: 79  ETLKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKKLRELGLGIVYMGLESGSPEIL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSY-AVDH 201
             + +     E I A   AR    + S  +I  L      +W+    E  +ALS    D+
Sbjct: 139 EDINKGVKVEEYIEASKKARASGIKSSITVISGLGG--KEKWKQHAIETGKALSLIDPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
           + L  L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 197 VGLLTLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|114571391|ref|YP_758071.1| MiaB-like tRNA modifying protein [Maricaulis maris MCS10]
 gi|114341853|gb|ABI67133.1| MiaB-like tRNA modifying enzyme [Maricaulis maris MCS10]
          Length = 444

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 76/203 (37%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + +    +  ++ L        +  G    S    +
Sbjct: 168 CDHRCTFC-----IIPYGRGNSRSVGA-GEVVDQIKTLVDSGHSEVVLTGVDLTSWGEDL 221

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLGVQS 139
             +  +  ++  I K+      + ++   +   ++   F+     G  RI     L +Q+
Sbjct: 222 PGKPPLGRLVQSILKHVPDLPRLRLS-SIDAIEIDEALFEA--VTGETRIAPYLHLSLQA 278

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   +AIA     ++  P +    D+I   P +T   +E  ++     
Sbjct: 279 GDDMILKRMKRRHLRDDAIALCERLKSARPEIAFGADMIAGFPTETDAMFENSIRLVDEC 338

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            + +L ++  +   GT   +M +
Sbjct: 339 RLAYLHVFPYSPRPGTPAARMPQ 361


>gi|326917127|ref|XP_003204853.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
           1-like, partial [Meleagris gallopavo]
          Length = 327

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        E  +       Q         S  +  +G    + + 
Sbjct: 90  CLNACTYCK-TKHARGDLASYPIEELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 147

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 148 PTLLWKLVEAIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 201

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 202 SDSVLMDMKREYCVADFRRVVDFLKEKVPGITIATDIICGFPGETDEDFQETMKLVEQYK 261

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
              L + Q     GT   KMH+
Sbjct: 262 FPSLFINQFYPRPGTPAAKMHQ 283


>gi|269961561|ref|ZP_06175923.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833602|gb|EEZ87699.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 474

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 73/231 (31%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P   +S D I   P +T   ++  ++       
Sbjct: 271 DRVLTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    L  +     LY L Q++ +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLSEQVKKERLYELQQTVNAQAMRYS 377


>gi|289578463|ref|YP_003477090.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|297544739|ref|YP_003677041.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528176|gb|ADD02528.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
 gi|296842514|gb|ADH61030.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 345

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++  E        ++    +        ++    G     
Sbjct: 60  CKQNCLYCGLRRDNKNIKRYRLKPE--------QIINFAKNARNLGYRTVVLQSGEDDFF 111

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I +        ++ I  +        ++ Y++AG +R  L +++ +++ 
Sbjct: 112 NVERMTKIIKSIKEL-------DVAITLSIGEKTREEYKAYKEAGADRYLLRIETTDKEL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L  N +       +   + +   +    +  LP QT+     ++        D + +
Sbjct: 165 YEKLDPNMSHENRKRCLKDLKELGYEVGTGCLIGLPGQTIESIADDILFFKEIDADMIGV 224

Query: 205 YQLTIEKGTLFYK 217
                   T    
Sbjct: 225 GPFIPNPDTPLKN 237


>gi|322418142|ref|YP_004197365.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124529|gb|ADW12089.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 488

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 74/235 (31%), Gaps = 20/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C      +R    ++   +     ++ M+ L     ++        P+  + +
Sbjct: 211 CDMECAFCS-----QRMFWREDWRCRKPEKVVEEMQHLIDSYGVNFFTLIDAYPT--KHR 263

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               +   +     +   V + IE     +  + +    YR+AG+  + LG +S ++  L
Sbjct: 264 ERWELFLDLVIEKKL--GVYLLIETRVEDIIRDEDILHKYREAGIIHVYLGAESADKDIL 321

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L +  +  +   A+ L R          +   P +T    +  +  A+    D     
Sbjct: 322 GSLNKGTSFEQNKRALDLLREARIITEASFMIGFPTETWESIQNTIDSAIYLNPDIAVFP 381

Query: 206 QLTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +T    T  +K          +   +LV P                    +  Y
Sbjct: 382 VVTPMPFTPIHKEMKERIRVFDYSKYNLVCPIVEPYQMTMEEITRALGKCYMSFY 436


>gi|194292679|ref|YP_002008586.1| oxidoreductase [Cupriavidus taiwanensis LMG 19424]
 gi|193226583|emb|CAQ72534.1| putative oxidoreductase, Radical SAM; similar to Anaerobic
           Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 474

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C +   V  ++  +     S + E++W+++      +  I F   T +  +P 
Sbjct: 207 CRSRCTFCLWPQTVGGHR-YRTRSAASVIAEVKWIKENMP--EVKEIMFDDDTFTDFKPR 263

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 264 VEEIARGLGQLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    E  ++ A       + + 
Sbjct: 315 LNIKKGLRTDIARRFTEDCRKLGIQIHGTFILGLPGETRETIEKTIEYAKEINPHTIQVS 374

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y+ 
Sbjct: 375 LAAPYPGTTLYRQ 387


>gi|150399807|ref|YP_001323574.1| radical SAM domain-containing protein [Methanococcus vannielii SB]
 gi|150012510|gb|ABR54962.1| Radical SAM domain protein [Methanococcus vannielii SB]
          Length = 372

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 14/197 (7%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C +C     F  +VR         I S +  ++ M  +    + ++  +G  T + 
Sbjct: 145 CPYNCRFCQTPQIFGKNVRHRS------IDSIVKIVKTMGDI-RFVTPNAFSYGSKTGTK 197

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
            + + +  ++  + +            E  P  V     +   K   N  I  G QS   
Sbjct: 198 PDIEKLENLMKKLFEIKNRLFFGTFPSEVRPEFVTSKTLELVNKYCDNTFIHFGAQSGSN 257

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + L ++ R H+  + I A+   R        D I+  P +   Q +  +         + 
Sbjct: 258 EVLNYIRRGHSVLDIINAVENCREYALTPKVDFIFGFPDENEFQRKESIDLMKYIIKKNG 317

Query: 203 SLYQLTIEK--GTLFYK 217
            ++        GT F  
Sbjct: 318 KVHAHYFMPLCGTYFEN 334


>gi|57340162|gb|AAW50068.1| hypothetical protein FTT0618 [synthetic construct]
          Length = 477

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 57/210 (27%), Gaps = 11/210 (5%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG- 79
           YV     C K C YC       R       F            Q     ++         
Sbjct: 178 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLAECAILAEQGVKEITLLGQNVNHYL 235

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
            P  +E    A +   I     +     I     +P     N    Y       N + L 
Sbjct: 236 GP--MENGQTADLALLIHFIAEIDGIERIRFTTSHPVEFSQNLIDAYATVPELANHLHLP 293

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  L   
Sbjct: 294 VQHGSDRILINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKLLDLV 353

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                D    +  +   GT    +  D  +
Sbjct: 354 KEINFDQSFSFIYSKRPGTPAADLPDDTPM 383


>gi|56460049|ref|YP_155330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Idiomarina
           loihiensis L2TR]
 gi|81363034|sp|Q5QYC5|MIAB_IDILO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56179059|gb|AAV81781.1| 2-methylthioadenine synthetase [Idiomarina loihiensis L2TR]
          Length = 479

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 74/226 (32%), Gaps = 27/226 (11%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + +    ++    +V     C K   YC F              +   + E+  + +  G
Sbjct: 137 DRLAEPKADGASAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPVDDVIYEIAQLAEQ-G 192

Query: 68  PRSISSI----------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
            R ++ +           + G           A +L  +A    +      T  ++P   
Sbjct: 193 VREVNLLGQNVNAYRGEHYDGEV------CRFAELLHLVAAIDGIDRIRYTT--SHPVEF 244

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF-- 173
             +  + Y+     V+ + L VQS  ++ L  + R H A E  + I   +   P ++   
Sbjct: 245 TDDITEAYKTIPELVSHLHLPVQSGSDRILTMMKRGHTALEYKSKIRALKKARPDIAMSS 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           D I   P ++   +E  +    S   D    +  +   GT    + 
Sbjct: 305 DFIIGFPGESDADFEATMDLIQSIDFDMSFSFIYSARPGTPAADLP 350


>gi|302379641|ref|ZP_07268126.1| radical SAM protein, TIGR01212 family [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312548|gb|EFK94544.1| radical SAM protein, TIGR01212 family [Finegoldia magna
           ACS-171-V-Col3]
          Length = 293

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 29/224 (12%)

Query: 28  CVKK-----CPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C  +     C +C         FN +  + +V           +++ + +        + 
Sbjct: 32  CPNRKNSNGCIFCSESGSGEFTFNKNSIKDQV---------ELQIKRLSEKKKADKFIA- 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +      +  I     +N  V   + + I      ++    Q           
Sbjct: 82  YFQSFTNTYKPVNELRKIYSDAIENENV---LVLDIATRGDCLDDEKIQLLSDINKEVDV 138

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G+QS ++ +L  + R ++            +   ++   +I  LP +T   +   +
Sbjct: 139 WVEMGLQSTKKSTLELINRAYSNEVYFDMAKKLMDNGIKVISHVIAGLPYETEDDFLESV 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            +   + +  + ++ L I+  +  Y  ++     + + +   D 
Sbjct: 199 YQTQIHDIWGIKIHSLYIQTDSRLYDYYQKNKFKILTMDEYTDW 242


>gi|260461143|ref|ZP_05809392.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Mesorhizobium opportunistum WSM2075]
 gi|259033177|gb|EEW34439.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Mesorhizobium opportunistum WSM2075]
          Length = 515

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 85/243 (34%), Gaps = 21/243 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++       + F  E+ W+ +  G   +  I      P++   +
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRDP---KKFAREIAWLHREHG---VELINLADENPTV-SKK 255

Query: 88  NIALILDGIAKNWTVSSNVEITI--EANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQ 143
                LD +     ++ +V + I        +  + +    YRKAGV R  LG+++ +EQ
Sbjct: 256 AWRAFLDAL-----IAEDVPVLIVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQ 310

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L+ + +  + S    AI L R          +     +         ++ ++Y  D + 
Sbjct: 311 TLQLIRKGGSISSDREAIRLLRKHGILSMATWVAGFEDEGFRHLWRGFRQLIAYDPDQIQ 370

Query: 204 LYQLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              +T  + T F+     +     D  L      V      +       +   E++  S 
Sbjct: 371 ALYVTPHRWTPFFRIARDRKVIQQDARLWDYKHQVLHMTRLKPWMLFFSVKLIELAVQSR 430

Query: 259 LGA 261
             A
Sbjct: 431 PKA 433


>gi|114329065|ref|YP_746222.1| radical SAM superfamily protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317239|gb|ABI63299.1| radical SAM superfamily [Granulibacter bethesdensis CGDNIH1]
          Length = 478

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 71/226 (31%), Gaps = 10/226 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  ++    +  Q    E+   ++               T  L   +
Sbjct: 207 CKSRCTFCLWPQTVGGHRYRVRSP-QHVAEEIALAKKYFPQVKEFFFDDDTFTDDLPRAE 265

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  +  +   W+ ++           +V     +  +  G+  + +G +S  +Q L  
Sbjct: 266 AIAREMGKLGVTWSCNAKA---------NVPRETLKILKDNGLRLLLVGYESGNQQILHN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A        ++  ++    I  LP +T    +  ++ A       L +   
Sbjct: 317 IKKGLRIEVAKKFSKDCHDLGIKIHGTFILGLPGETKETIQETIEYAKEVNPHTLQVSLA 376

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
               GT  Y    +   +       +D + +  +      L   E+
Sbjct: 377 APYPGTFLYNQAVENGWLDAEHAELIDEHGIQMAPLHYDHLSHTEM 422


>gi|295087519|emb|CBK69042.1| Fe-S oxidoreductase [Bacteroides xylanisolvens XB1A]
          Length = 297

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 76/218 (34%), Gaps = 9/218 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
            KC +C    H  ++++   + ++S L  +Q  +          +F  G  P  +    +
Sbjct: 33  HKCKFCSLY-HGTKFRLSPVSEVESDLKIIQEYQP-----KARRVFLTGANPFALSYNRL 86

Query: 90  ALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +   I K       +   +  A+  S  V   +  R    + IS+G +S ++++L  +
Sbjct: 87  LDLGLLIRKYLPYCETIGTFSRIADIKSKSVEELKNLRHLKFDSISIGTESGDDETLSRM 146

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + + A++ +           R +   +  L    +         +         ++   
Sbjct: 147 NKGNTAADILEQCRKLEEANIRYNLVYLTGLAGKGKGQQNAIHTAEIFNQLHPFTINFVS 206

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           LT+   +  Y+  ++G  +  SE   +       S  S
Sbjct: 207 LTVFPESELYQEIQEGKFIEASERERLLELRTFISTLS 244


>gi|212638682|ref|YP_002315202.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
 gi|212560162|gb|ACJ33217.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
          Length = 467

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 70/201 (34%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 170 CNNFCTFC---IIPWARGLMRSRDPKEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 226

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A++L D   +   +      +IEA+   +        R++   V  + + +QS     
Sbjct: 227 NFAMLLRDMDEQVKGLKRLRISSIEAS--QITDEVIDVLRQSDKIVRHLHIPLQSGSNAV 284

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   R +FP ++   D+I   P +T  ++    +         L
Sbjct: 285 LKRMRRKYTTEFFAERLARLREVFPDLAVTSDVIVGFPGETEEEFMETYEFIREQRFSEL 344

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++  +   GT   +M    D
Sbjct: 345 HVFPYSKRTGTPAARMPDQVD 365


>gi|166031818|ref|ZP_02234647.1| hypothetical protein DORFOR_01519 [Dorea formicigenerans ATCC
           27755]
 gi|166028271|gb|EDR47028.1| hypothetical protein DORFOR_01519 [Dorea formicigenerans ATCC
           27755]
          Length = 470

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPS--- 82
           C   C YC     +  Y  G+E     ++ + E++   +L        +  G    S   
Sbjct: 189 CNNFCSYC-----IVPYVRGRERSRKPEAIVREIE---RLVADGVTEVMLLGQNVNSYGK 240

Query: 83  -LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            L EP   A +L  I +   +       + ++P  +     +   K+      + L VQS
Sbjct: 241 NLEEPLPFAELLQKIEQIEGLHRIRF--MTSHPKDLSDELIEVMGKSKKICKHLHLPVQS 298

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++   + +  +   R   P +S   D+I   P +T   +   L      
Sbjct: 299 GSSRILKKMNRHYTKEQYLELVDKIRAAVPDISLTTDIIVGFPGETEEDFLETLDIVRKV 358

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 359 RYDSAFTFIYSKRTGTPAATM 379


>gi|51473604|ref|YP_067361.1| tRNA-methylthiotransferase (MiaB protein) [Rickettsia typhi str.
           Wilmington]
 gi|51459916|gb|AAU03879.1| tRNA-methylthiotransferase (MiaB protein) [Rickettsia typhi str.
           Wilmington]
          Length = 421

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 93/269 (34%), Gaps = 32/269 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C   C +C     +  Y  G+     + +  +    +    +    +   G         
Sbjct: 148 CDHNCTFC-----IIPYGRGRSR--STPIGTIVAQVKHLVLKGFKEVVITGVDVTAYGSD 200

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G+P+    Q I  +L+ + +   +  +     E +    E      Y K  +    + 
Sbjct: 201 LPGSPTF--AQMIKRVLNLVPELKRIRLSSIDIAEVDDEFFE---LIAYSKRIMPHFHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +QS ++  L+ + R HN +  I      R I P +SF  D+I   P +T   +E   +  
Sbjct: 256 LQSGDDMILKRMKRRHNRASVIEFCQKLRAIRPEVSFGADIIAGFPTETNEMFENTRKLI 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL--YNLTQSITSAHGLHAYE 252
           L   + +L ++  +  +GT   +M +    +       +    YN        H     E
Sbjct: 316 LEAELQYLHVFPYSEREGTPAIRMPQVPKNIRKERAKILRQDGYNQLTEFFKKHIGQKVE 375

Query: 253 ISNHSFLGAESLHNLNYW--RYGDYIGIG 279
           +   +   A   H  N+   +   Y+ IG
Sbjct: 376 LLIENNNVA---HTENFIPVKLDKYLAIG 401


>gi|89074960|ref|ZP_01161405.1| putative 2-methylthioadenine synthetase [Photobacterium sp. SKA34]
 gi|89049199|gb|EAR54763.1| putative 2-methylthioadenine synthetase [Photobacterium sp. SKA34]
          Length = 475

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               +A   + +     +     I     +P     +    Y      VN + L VQS  
Sbjct: 211 HDGEVASFAELLRLVAAIDGIDRIRYTTSHPIEFTDDIIDVYTDTPELVNYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R + P ++   D I A P ++   +E  ++       
Sbjct: 271 DRILTMMKRPHTVLEYKSKIRKLRKVRPDITMSSDFIVAFPGESDQDFEDTMKLIRDIDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT       D    L  +     LY L Q I S    HA ++
Sbjct: 331 DISYSFIFSPRPGTPAA----DYPCDLSEDVKKERLYALQQQINSQAMRHARQM 380


>gi|289423266|ref|ZP_06425077.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
 gi|289156366|gb|EFD05020.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
          Length = 350

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C ++C YC    +N+  +RY++ +E  + + L   +           ++    GG    
Sbjct: 64  YCKRECSYCGINAYNTKAKRYRLTKEEILATCLHGKEL--------GFNTFVLQGGEDMY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + + +A I+        ++ +  ITI     S +       R+AG +R  L  ++  E+
Sbjct: 116 YDDEKMADII---RSIKDLAPDSAITISIGERSKDSYRL--LREAGADRYLLRHETANEE 170

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + L       +    +   +++  ++    +  LP  T + +  +L+         + 
Sbjct: 171 TYKKLHSKSYFKDRHQCLKDLKDLGFQVGSGFMVGLPDYTNSDYVKDLRFLKELEPAMVG 230

Query: 204 LYQLTIEKGTLFY 216
           +      + T   
Sbjct: 231 MGPFIAHEDTPMR 243


>gi|319639318|ref|ZP_07994069.1| hypothetical protein HMPREF0604_01693 [Neisseria mucosa C102]
 gi|317399502|gb|EFV80172.1| hypothetical protein HMPREF0604_01693 [Neisseria mucosa C102]
          Length = 440

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   LTE+  + Q  G + I+ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE--- 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +E   I      +     +     +     +P        + YR     V+ + L +QS
Sbjct: 210 -MENGEICDFATLLRIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R + A E  + I    A      +S D I   P +T  ++E  L+     
Sbjct: 269 GSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDI 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           A D   ++  +   GT    +H
Sbjct: 329 AFDLSFVFIYSPRPGTPAANLH 350


>gi|317501694|ref|ZP_07959885.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088421|ref|ZP_08337336.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|316896945|gb|EFV19025.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330408188|gb|EGG87676.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 431

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 82/241 (34%), Gaps = 21/241 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +  Y  G+    Q+    ++ +R L G      +  G    S  I+ 
Sbjct: 154 CNQFCTYC-----IIPYARGRVRSRQT-KDVLEEVRDLAGNGYKEVVLTGIHLSSYGIDF 207

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +LD I +   V     I +    P  +     +   +         L +QS  + 
Sbjct: 208 DGQRHLLDLIKEVHKVEGIERIRLGSLEPGIITEEFAKELSEMPKVCPHFHLSLQSGCDA 267

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + + E      + R  F    ++ D+I   P +T  ++E             
Sbjct: 268 TLKRMNRKYTSGEYYDRCQILRKYFDHPALTTDVIVGFPGETEEEFEASYAFVDRVDFYE 327

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
             +++ +  +GT    M    D  +  E  A  +              AYE    SF+G 
Sbjct: 328 THIFKYSKREGTKAAVMDGQIDEKIKGERSARMI------ALGERKKKAYE---DSFIGK 378

Query: 262 E 262
           E
Sbjct: 379 E 379


>gi|307719475|ref|YP_003875007.1| hypothetical protein STHERM_c17990 [Spirochaeta thermophila DSM
           6192]
 gi|306533200|gb|ADN02734.1| hypothetical protein STHERM_c17990 [Spirochaeta thermophila DSM
           6192]
          Length = 363

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 67/194 (34%), Gaps = 10/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C K C YC     +RR       +       +  +R+       + +   G  P     
Sbjct: 65  YCRKDCLYCG----IRRSNRKVRRYRLDEEVILAVVREAFARGFRTFVLQSGEDP-AWPA 119

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +A +++ + +     +  E  +  +   +   +++  R+AG +R  +  ++ +    R
Sbjct: 120 ERLARLVERVKQ----ETRGEAAVTLSCGLMSREDYRLLREAGADRYLMRFETADPVLHR 175

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L R  +    +  +H  R++   +    +  LP +T       L       +D + +  
Sbjct: 176 RL-RGMDLDRRLEGLHHLRDLDYEVGSGFMVGLPGETEETMWENLLLCRRLDLDMVGIGP 234

Query: 207 LTIEKGTLFYKMHK 220
                 T      +
Sbjct: 235 FIPHPETPLAHAPQ 248


>gi|306842918|ref|ZP_07475554.1| MiaB-like tRNA modifying enzyme [Brucella sp. BO2]
 gi|306286941|gb|EFM58461.1| MiaB-like tRNA modifying enzyme [Brucella sp. BO2]
          Length = 427

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  + +  +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PGNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DEDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I       A         D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCQTVRALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|291461112|ref|ZP_06027070.2| radical SAM protein [Fusobacterium periodonticum ATCC 33693]
 gi|291378820|gb|EFE86338.1| radical SAM protein [Fusobacterium periodonticum ATCC 33693]
          Length = 307

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 71/215 (33%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  N          ++       ++  + +          +F   
Sbjct: 31  CPNRDGKVSRGGCIFCSENGSGDFTATKLKSIHAQIEEQIDLVSKKYKGDK-YIAYFQNF 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
           T +  E   +  I +    +  +   V + I   P  +  +  +   +        + LG
Sbjct: 90  TNTYAEVSYLRKIYEEALSHEKI---VGLAIATRPDCLGDDVLELLAELNKKTFLWVELG 146

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ +   ++  R +       A      +  +    +I  LPK+    +      A +
Sbjct: 147 LQTVNDDVAKYFNRAYETGIYQEASEKLNKLNIKFVTHIIIGLPKEEEDDYLKTAIFAQN 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
                + L+ + + K T   K++ +GDL + ++  
Sbjct: 207 CGTWGVKLHLMYVVKNTPLEKLYLNGDLKVNTKEE 241


>gi|241759310|ref|ZP_04757416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria flavescens
           SK114]
 gi|241320446|gb|EER56743.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria flavescens
           SK114]
          Length = 440

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   LTE+  + Q  G + I+ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGEEFSRPLNDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE--- 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
            +E   I      +     +     +     +P        + YR     V+ + L +QS
Sbjct: 210 -MENGEICDFATLLRIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHLPIQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R + A E  + I    A      +S D I   P +T  ++E  L+     
Sbjct: 269 GSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDI 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           A D   ++  +   GT    +H
Sbjct: 329 AFDLSFVFIYSPRPGTPAANLH 350


>gi|193222195|emb|CAL60317.2| putative Fe-S oxidoreductase [Herminiimonas arsenicoxydans]
          Length = 508

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 68/232 (29%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C   S + +     +  I  FL E++    +           F     + ++ 
Sbjct: 172 CPFKCEFC--LSALDKTAWPFD--IDLFLAELEVLHARGARLFKFVDRTFNLNIKTSLKI 227

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
                 LD +  N      V    E  P  +     +G  K   G  +  +G+QS   + 
Sbjct: 228 MQFF--LDKLEANP--QDPVFAHFEVVPDHLPDALKEGIMKFPPGTLQFEIGIQSFNPEV 283

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              + R  N  +A   I          +  DLI  LP + +  +     R L      + 
Sbjct: 284 QALVSRKQNNEKAAENIRWLCEHSHAHLHVDLIAGLPGEDIASFARGFDRLLELQPHEIQ 343

Query: 204 LYQLT------IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              L       I + T  Y M  D              +N  Q +       
Sbjct: 344 FGILKRLRGTPIIRHTEQYGMVFDPYPPYTILATDRIDFNAMQQLVRFARYW 395


>gi|298293911|ref|YP_003695850.1| RNA modification enzyme, MiaB family [Starkeya novella DSM 506]
 gi|296930422|gb|ADH91231.1| RNA modification enzyme, MiaB family [Starkeya novella DSM 506]
          Length = 476

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C K C +C     V  Y  G E   +     +  + +L           G    +   ++
Sbjct: 170 CDKFCTFC-----VVPYTRGAEVS-RPLSKILDEVVRLADSGVREITLIGQNVNAYHGLD 223

Query: 86  P----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 N+A ++  +A+   ++     T  ++P  ++      + +    +  + L VQS
Sbjct: 224 AGGRSANLAELVRRVAEVPGIARVRYTT--SHPRDMDEELIAAHGEMPALMPYLHLPVQS 281

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
              + L  + R H+       +   R   P +  S D I   P +T   +   +      
Sbjct: 282 GSNRILAAMNRKHDRELFFDIVEKVRAARPDIAFSSDFIVGFPGETDEDFADTMDLVEKV 341

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT    M
Sbjct: 342 GFASAFSFKYSPRPGTPAAGM 362


>gi|168703299|ref|ZP_02735576.1| Radical SAM domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 616

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 28/221 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           CV  C +C +     +      + + + L   +      G   +  +      P+L    
Sbjct: 209 CVFNCKFCYYPKSYDKQYYLSTDLVSASLAHARTR----GAEEVFLL-----DPTLNQRK 259

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +      +L             E+  E     +         +AG   + +G+QS+E  +
Sbjct: 260 DFAEFVRLLARGNPGRKFKYFGELRAEG----ITPEIASLLAEAGFTEVEVGLQSVERDA 315

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV-DHLS 203
           +  + R +N       +    +    ++ DLI  LP  T        +      +     
Sbjct: 316 MDLMARRNNLKAFEKGVRALIDAGISVTVDLIVGLPGDTEESVRRGFRYLRDGGLYSRAQ 375

Query: 204 LYQLTIEKGT-----------LFYKMHKDGDLVLPSENVAV 233
           ++ L +  GT            F        L  P+ + A 
Sbjct: 376 VFNLAVLPGTAFRHEAGELGLHFQPRPPYYVLRTPTLDRAA 416


>gi|119775707|ref|YP_928447.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shewanella
           amazonensis SB2B]
 gi|119768207|gb|ABM00778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella amazonensis
           SB2B]
          Length = 483

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 16/225 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   + E+  + +  G R ++ +      + G       
Sbjct: 166 CSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQ-GVREVNLLGQNVNAYRGAK----H 220

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I    + +     +     +     +P     +    Y      V+ + L VQS  +
Sbjct: 221 DGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSD 280

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       D
Sbjct: 281 RILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKLIEDVNFD 340

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
               +  +   GT    +  D D+    + +A     + Q     
Sbjct: 341 MSFSFIYSARPGTPAADLPDDVDMEEKKQRLADLQELINQQAMRY 385


>gi|15604640|ref|NP_221158.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
           prowazekii str. Madrid E]
 gi|6226397|sp|Q9ZCE8|MIAB_RICPR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|3861335|emb|CAA15234.1| unknown [Rickettsia prowazekii]
 gi|292572459|gb|ADE30374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia prowazekii
           Rp22]
          Length = 445

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 71/231 (30%), Gaps = 20/231 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQ-----LTGPRSISSIFFGGGTP 81
           C K C +C                ++  +   ++ +       +   +++++    G   
Sbjct: 162 CDKFCTFC---VVPYTRGAEFSRSVEQVYRESLKAVSNDAKEIILLGQNVNAYHGKG--- 215

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVN--NFQGYRKAGVNRISLGVQ 138
                  I  + D +     + +   +  + ++P  +  +     G     +  + L VQ
Sbjct: 216 ---PKDKIFTLADLLKCLAQIPNLARLRYMTSHPIDMTDDLIKLHGTEPKLMPFLHLPVQ 272

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R H+       I+  R     +  S D I   P +T   +E  L     
Sbjct: 273 SGSNKILKAMNRKHDRDYYFNIINRLREARSDIVLSSDFIVGFPGETEQDFEDTLDLVHR 332

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                   ++ +   GT            + S+ + +    L     + + 
Sbjct: 333 VKYGQCYSFKYSPRPGTPGAIRTDQIPEHIKSKRLTILQQELATQQLAFNQ 383


>gi|227872687|ref|ZP_03991017.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
 gi|227841501|gb|EEJ51801.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
          Length = 423

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC      R     +    +  L E + +        I         G    L 
Sbjct: 134 CDKYCSYC---IIPRLRGHYRSIPKELVLEEARALVSEGAGELILVAQETTLYGTD--LY 188

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + + +A +L  +++   +       +   P  +E    +  ++     + + L +Q   +
Sbjct: 189 KKKALAELLAELSEIPNLQWIR--ILYCYPEEIEPELIREMKRNPKVCHYLDLPIQHASD 246

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R     E    I L R   P ++    +I   P +T   ++  L        D
Sbjct: 247 RILKRMNRRTRKEELKEKIALLRKEMPDIALRTTIITGFPGETEEDFQEVLDFISEMRFD 306

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            L  +  + E+GT   +M       L ++ ++  +
Sbjct: 307 RLGAFPYSQEEGTKAAEMEDQIPEKLKNQRLSQIM 341


>gi|149731822|ref|XP_001494687.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           [Equus caballus]
          Length = 578

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTSL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PALLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDTVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETNEDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 385 FPSLFINQFYPRPGTPAAKM 404


>gi|73748031|ref|YP_307270.1| radical SAM/B12 binding domain-containing protein [Dehalococcoides
           sp. CBDB1]
 gi|73659747|emb|CAI82354.1| radical SAM/B12 binding domain protein [Dehalococcoides sp. CBDB1]
          Length = 494

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 77/254 (30%), Gaps = 22/254 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   +         +  ++  + +++    L     +  I F     +     
Sbjct: 193 CPFKCSFC--YNIPFHQGHRADLSVERIIAQIE---HLQKNYKVKFIRFFEDNFTF---- 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +           ++   E+  + +   +     KAG   + +GV++  ++ L +
Sbjct: 244 NRKRMREFCQTVIDRRIKIKWDTESR-ADMSEEDVALMAKAGCTSVGIGVETGSKRMLEY 302

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  +  E                  ++ A+P +T+  +                  + 
Sbjct: 303 LNKGVDLDEMGRTFWRFVKHGIMPRLYIMLAVPTETVEDFTETQDMLHRMEDPPFMYMRF 362

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV----AVDLYNLTQSITSAHGLHAY--EISNHSFLGA 261
               GT  Y      + + P E++       +Y  T+   S          IS+ +   A
Sbjct: 363 VPYPGTPLYNQLVKDNRIKPPESLGEWAKFSVYFATKGNLSELSDEVINQAISHWAHSYA 422

Query: 262 ES------LHNLNY 269
                    HN  Y
Sbjct: 423 SRRVMFTLRHNPRY 436


>gi|310828942|ref|YP_003961299.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612]
 gi|308740676|gb|ADO38336.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612]
          Length = 346

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     + +  S    M            + +  GG  P     
Sbjct: 61  YCKNDCYYCG----IRRGNGCVKRYRLSEDNIMDCCATGYKLGFRTFVLQGGEDP-WFND 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  I+  I   +      +  I  +       +++    AG NR  L  ++       
Sbjct: 116 DRMCRIVGRIRHTYP-----DCAITLSLGERSAESYKRLYAAGANRYLLRHETANFSHYH 170

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L  +  +       ++  ++I  ++   ++   P QT      +L    +     + + 
Sbjct: 171 TLHPKALSPERRQRCLYNLKSIGYQVGTGMMVGSPGQTAEHLAEDLLFMKALEPSMVGIG 230

Query: 206 QLTIEKGTLFYKMH 219
               +K T F K  
Sbjct: 231 PFIPQKDTPFGKKR 244


>gi|222150096|ref|YP_002551053.1| hypothetical protein Avi_4197 [Agrobacterium vitis S4]
 gi|221737078|gb|ACM38041.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 424

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 68/230 (29%), Gaps = 16/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      ++  R+L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVEQARKLVENGYREVVLTGVDATSYGADL 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             Q    +L                   +   V+ +      +    +  + L +Q  ++
Sbjct: 201 PGQPSLGLLAKTLLKQVPDILRLRLSSIDSIEVDRHLLDLIAEEPRFMPHLHLSLQHGDD 260

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H+ ++A+      R + P  SF  D+I   P +T        + A    + 
Sbjct: 261 MILKRMKRRHSRADALGFATQVRVLRPDFSFGADMIAGFPTETEEMAANSARLAQEIGIA 320

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           HL ++  +   GT   +M     L                       L  
Sbjct: 321 HLHVFPYSPRPGTPAARMP---QLDRALVKARAASLRAVAEQLHHAHLEH 367


>gi|153815340|ref|ZP_01968008.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
 gi|145847402|gb|EDK24320.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
          Length = 442

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 82/241 (34%), Gaps = 21/241 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +  Y  G+    Q+    ++ +R L G      +  G    S  I+ 
Sbjct: 165 CNQFCTYC-----IIPYARGRVRSRQT-KDVLEEVRDLAGNGYKEVVLTGIHLSSYGIDF 218

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +LD I +   V     I +    P  +     +   +         L +QS  + 
Sbjct: 219 DGQRHLLDLIKEVHKVEGIERIRLGSLEPGIITEEFAKELSEMPKVCPHFHLSLQSGCDA 278

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + + E      + R  F    ++ D+I   P +T  ++E             
Sbjct: 279 TLKRMNRKYTSGEYYDRCQILRKYFDHPALTTDVIVGFPGETEEEFEASYAFVDRVDFYE 338

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
             +++ +  +GT    M    D  +  E  A  +              AYE    SF+G 
Sbjct: 339 THIFKYSKREGTKAAVMDGQIDEKIKGERSARMI------ALGERKKKAYE---DSFIGK 389

Query: 262 E 262
           E
Sbjct: 390 E 390


>gi|220928394|ref|YP_002505303.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998722|gb|ACL75323.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 436

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 81/213 (38%), Gaps = 29/213 (13%)

Query: 28  CVKK--------CPYCD-----FNSHVRRYKVGQEN---FIQSFLTEMQWMRQLTGPRSI 71
           C  +        C  C+     FN++     + +++   + ++     +  R +    ++
Sbjct: 61  CPHRFREDRISGCSMCNYQSYFFNTYASMAALKKKDINLYAKAVRLSFENARGVMSKPNL 120

Query: 72  SSIFFGGGTPSL--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             +     T S   + PQ    +              +  +E    SV   + +  +K  
Sbjct: 121 FELISASDTLSREELPPQAFEELFGKNDLFSK--KPFKYIMETRAPSVTSESMEMLKKYL 178

Query: 130 VNR----ISLGVQSLEEQSL-RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--- 181
            N+    + LG++S +E     ++ ++    + I A+ L      + S ++++ +P    
Sbjct: 179 GNKSRVLLELGIESSDEWIRNHWINKDITNKDIITAVELIHQAGFKFSINILFGIPMLTE 238

Query: 182 -QTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            Q++  ++  ++ A     D +  + L+ ++GT
Sbjct: 239 QQSIEIFKKSVEWADELGADEILCFPLSRKEGT 271


>gi|4104517|gb|AAD02057.1| unknown [Clostridium acetobutylicum DSM 1731]
          Length = 386

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC                 +  + E++ + +      I S I        L   
Sbjct: 152 CNRFCSYC---LIPYARGGVCSKNPEKVIGEIKRLAEHGFKEIILSGIHIASYGDDLKGD 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            N+  I++   +   +      +IE  P   + +     +          L +QS   ++
Sbjct: 209 WNLISIIEKAEQIDGIERIRIGSIE--PRFFDEDTISKIKNMKKMCPHFHLSLQSGCTET 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R + A E    ++  R     +S   D+I   P +T  ++E          +  +
Sbjct: 267 LERMNRKYTAEEYKEIVYKLRENISDVSITTDVIVGFPGETDEEFEKTYDFLKEIELAKM 326

Query: 203 SLYQLTIEKGTLFYKM 218
            +++ +  +GT    M
Sbjct: 327 HVFKYSPREGTKAAAM 342


>gi|323495441|ref|ZP_08100518.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           brasiliensis LMG 20546]
 gi|323310364|gb|EGA63551.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           brasiliensis LMG 20546]
          Length = 474

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  +    G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLADQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T    +  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDHQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     LY L Q++ +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDVPEQEKKERLYELQQTVNAQAMRYS 377


>gi|322806038|emb|CBZ03605.1| tRNA-i(6)A37 methylthiotransferase [Clostridium botulinum H04402
           065]
          Length = 450

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 83/244 (34%), Gaps = 30/244 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E         ++  +++L           G    S    
Sbjct: 169 CNNFCTYC-----IVPYVRGRER--SRTPENIEAEIKKLISEGYKEITLLGQNVNSYGKD 221

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP    A +L  +     +       + ++P  +  +  +   K      +I L VQS 
Sbjct: 222 LEPNVTFAELLKRVNNIEGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSG 279

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L       
Sbjct: 280 SSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEETLSLVKEVE 339

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D    +  +I KGT   K           E+V    +N    + +       EIS    
Sbjct: 340 YDSAFTFLYSIRKGTPAAKFEDQ-----VPEDVKHKRFNRLVEVLN-------EISAKKN 387

Query: 259 LGAE 262
              E
Sbjct: 388 KAYE 391


>gi|298493062|ref|YP_003723239.1| MiaB family RNA modification protein ['Nostoc azollae' 0708]
 gi|298234980|gb|ADI66116.1| RNA modification enzyme, MiaB family ['Nostoc azollae' 0708]
          Length = 453

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC          V Q     +   EM+ + +  G + ++ +      +G   P 
Sbjct: 156 CNERCTYC---VVPNVRGVEQSRTPTAIRAEMEELGR-KGYKEVTLLGQNIDAYGRDLPG 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +++  + D +     V     +     +P        +   +         +  Q
Sbjct: 212 TTPEGRHLHTLTDLLYYVHDVPGIERLRFATSHPRYFTERLIKACAELPKVCEHFHIPFQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + Q L+ + R +   +    I   R   P   +S D I   P +   Q+E  L+    
Sbjct: 272 SGDNQILKGMSRGYTHEKYRRIIDTIRRYMPDASISGDAIVGFPGEREEQFENTLKLVDD 331

Query: 197 YAVDHLSLYQLTIEKGTL 214
              D L+    +   GT 
Sbjct: 332 IGFDLLNTAAYSPRPGTP 349


>gi|240851393|ref|YP_002972796.1| tRNA modification enzyme, MiaB family [Bartonella grahamii as4aup]
 gi|240268516|gb|ACS52104.1| tRNA modification enzyme, MiaB family [Bartonella grahamii as4aup]
          Length = 427

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 19/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    +      ++ +++L G          +    +G   
Sbjct: 150 CDHRCTFC-----IIPYGRGPSRSVP-MGAVIEQIKKLIGEGIQEVVLTGVDLTSYGHDL 203

Query: 81  PSLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P       +   IL  +     +  +   +IEA+   +       Y    +  + L +Q+
Sbjct: 204 PGKATLGKLTSAILHHVPNLARLRLSSIDSIEADEELIN---LLAYETRIMPHLHLSLQA 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +   L+ + R H    AI       A+        DLI   P +T   ++  L      
Sbjct: 261 GDNMILKRMKRRHLREHAIQFCQELRAKRPTMVYGADLIAGFPTETEEMFQNSLVLIKDC 320

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDG 222
            + HL ++  +  +GT   +M +  
Sbjct: 321 NLTHLHVFPFSPREGTPAARMPQIN 345


>gi|225028441|ref|ZP_03717633.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
 gi|224954239|gb|EEG35448.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
          Length = 465

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 73/203 (35%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C K+C YC            +   ++  L E + + +        +    ++  +   G 
Sbjct: 172 CNKRCTYC---IIPYIRGHYRSFPMEDLLEEARKLAEGGVKELILIAQETTVYGMDCYGR 228

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  + +  +L  + +   +       +   P  +        +K     + + + +
Sbjct: 229 -------KALPELLTKLCEIEGIEWIR--ILYCYPEEITDELIAVMKKEKKICHYLDIPI 279

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRAL 195
           Q  E+  L+ +GR  N +E ++ +   R   P +     LI   P +T  +++  +    
Sbjct: 280 QHSEDTILKRMGRRTNRAELVSLVEKLRKEIPDIVLRTTLITGFPGETEEEFKNMVDFVD 339

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
           S   D L ++  + E+GT   +M
Sbjct: 340 SMEFDRLGVFPYSAEEGTKAAEM 362


>gi|239617821|ref|YP_002941143.1| Radical SAM domain protein [Kosmotoga olearia TBF 19.5.1]
 gi|239506652|gb|ACR80139.1| Radical SAM domain protein [Kosmotoga olearia TBF 19.5.1]
          Length = 389

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 80/237 (33%), Gaps = 17/237 (7%)

Query: 28  CVKKCPYCD----FNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC     F   VR   V    +F +  +   + + +   P +       G TP 
Sbjct: 149 CPFGCNYCQTPRIFGRRVRHRSVENILHFARESVERGRKVARFITPNAFGYGSKNGVTP- 207

Query: 83  LIEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSL 140
               + I  +L G+ K             +  P SV  +     ++   N+ I +G+QS 
Sbjct: 208 --NTKVIYELLSGMRKIGMREVYFGSFPSDVRPESVSDDVLAIVQEFCDNKVIVVGLQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            ++ L+ L R H+   AI  I            D+I+  P +  +  E   + A      
Sbjct: 266 SDRILKQLNRGHDVQTAINTIRKISRYGFTPYVDMIFGFPFEEDSDIEKSFEVAYYLYEK 325

Query: 201 HLSL---YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + ++   +      GT F  +       L S+ +        + I      +   IS
Sbjct: 326 YGAVIHGHTFMPLPGTPFENL----KSKLSSKTLRELGRLSAKGIMKGQWQNQITIS 378


>gi|148379760|ref|YP_001254301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
           str. ATCC 3502]
 gi|153933044|ref|YP_001384058.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
           str. ATCC 19397]
 gi|153936669|ref|YP_001387598.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
           str. Hall]
 gi|229890482|sp|A7FUL1|MIAB_CLOB1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890486|sp|A5I2S3|MIAB_CLOBH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|148289244|emb|CAL83340.1| putative radical SAM superfamily protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929088|gb|ABS34588.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
           str. ATCC 19397]
 gi|152932583|gb|ABS38082.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
           str. Hall]
          Length = 450

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 83/244 (34%), Gaps = 30/244 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E         ++  +++L           G    S    
Sbjct: 169 CNNFCTYC-----IVPYVRGRER--SRTPENIEAEIKKLISEGYKEITLLGQNVNSYGKD 221

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP    A +L  +     +       + ++P  +  +  +   K      +I L VQS 
Sbjct: 222 LEPNVTFAELLKRVNNIEGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSG 279

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L       
Sbjct: 280 SSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEETLSLVKEVE 339

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D    +  +I KGT   K           E+V    +N    + +       EIS    
Sbjct: 340 YDSAFTFLYSIRKGTPAAKFEDQ-----VPEDVKHKRFNRLVEVLN-------EISAKKN 387

Query: 259 LGAE 262
              E
Sbjct: 388 KAYE 391


>gi|91228826|ref|ZP_01262733.1| hypothetical protein V12G01_00185 [Vibrio alginolyticus 12G01]
 gi|269965463|ref|ZP_06179582.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91187631|gb|EAS73956.1| hypothetical protein V12G01_00185 [Vibrio alginolyticus 12G01]
 gi|269829942|gb|EEZ84172.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 474

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +  +     LY L Q+I +    ++
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDVSEQVKKERLYELQQTINAQAMRYS 377


>gi|121606262|ref|YP_983591.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Polaromonas
           naphthalenivorans CJ2]
 gi|229890592|sp|A1VSP2|MIAB_POLNA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120595231|gb|ABM38670.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaromonas
           naphthalenivorans CJ2]
          Length = 447

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 65/198 (32%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K C YC       R +     F    +       Q     ++          S+    
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYRGSMGGTA 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + A +L+ +++   +     IT  ++P+         Y      VN + L VQ   +
Sbjct: 213 EIADFATLLEYVSEIPGIERIRYIT--SHPNEFTQRLIDAYATLPKLVNHLHLPVQHGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      MS D I   P +T   +E  ++       D
Sbjct: 271 RILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFEKLMKLVNDVGYD 330

Query: 201 HLSLYQLTIEKGTLFYKM 218
               +  +   GT    +
Sbjct: 331 TSFSFIFSPRPGTPAANL 348


>gi|324993677|gb|EGC25596.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK405]
 gi|324995010|gb|EGC26923.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK678]
 gi|327490108|gb|EGF21896.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK1058]
          Length = 315

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  +++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYDETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIICDQLEIIPEHIVIH 266


>gi|322806263|emb|CBZ03831.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum H04402 065]
          Length = 289

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 91/233 (39%), Gaps = 13/233 (5%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ + 
Sbjct: 27  HNKCSFCS----MYKNEKFRVRELKEIFEDLEESK--LYYRRINRIFLADGDALCLKTET 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L  
Sbjct: 81  LKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKELRELGLGIVYMGLESGSPEILED 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QTMTQWEMELQRALSY-AVDHLSLY 205
           + +     E I A   AR    + S  +I  L   +   Q   E  +ALS    D++ L 
Sbjct: 141 INKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWQQHATETGKALSLIDPDYVGLL 200

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
            L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 201 TLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|283955058|ref|ZP_06372561.1| LOW QUALITY PROTEIN: MiaB-like tRNA modifying enzyme YliG
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283793425|gb|EFC32191.1| LOW QUALITY PROTEIN: MiaB-like tRNA modifying enzyme YliG
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 416

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIQGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEILNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|270292445|ref|ZP_06198656.1| radical SAM protein, TIGR01212 family [Streptococcus sp. M143]
 gi|270278424|gb|EFA24270.1| radical SAM protein, TIGR01212 family [Streptococcus sp. M143]
          Length = 312

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIKYLAELSERMHVTVELGLQTTFEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|330507822|ref|YP_004384250.1| B12 binding domain/radical SAM domain fusion protein [Methanosaeta
           concilii GP-6]
 gi|328928630|gb|AEB68432.1| B12 binding domain/radical SAM domain fusion protein [Methanosaeta
           concilii GP-6]
          Length = 583

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 12/205 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           CP+ C F S     +  +   + S L E++W+R     + I     ++    G    +  
Sbjct: 186 CPFQCTFCSKGIWERSLRLRKVDSVLAEVEWLRDTFRVKEIFFQDDTLNVNRGWFESLCS 245

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             + L L+   K             AN   V+ +  +  + AG   I  GV+S  ++ L 
Sbjct: 246 GLVELGLNKKVKFKG-------PFRANEKMVDPDILKMAKDAGFWMIFYGVESGNQRVLD 298

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     E   A  + +    +     +     ++    +  ++ A     D+     
Sbjct: 299 SIKKGITLRELERAFQITKKAGIKTYASFMIGNLGESRETIKDTIRFARKLDPDYYGFAV 358

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENV 231
            T   G  FY+  K G  +L     
Sbjct: 359 ATPYPGCEFYEAAKRGGYLLADFEE 383


>gi|329960232|ref|ZP_08298674.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
 gi|328532905|gb|EGF59682.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
          Length = 439

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G R I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGSIASLVEQARQAAA-EGGREIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIE--PNLLTEEIIEFVSRSKRFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   +   P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDTALFASKVKKIKEAMPDSFIGVDVIVGTRGETEEYFEQAYEFIKGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|323473663|gb|ADX84269.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus REY15A]
 gi|323476314|gb|ADX81552.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           HVE10/4]
          Length = 421

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 19/211 (9%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C +C         K+ +       L E+    +         I   G   
Sbjct: 135 IPVADGCAGNCSFC-------ITKLARRKLRSYPLREIVNAARDAVKAGAKEIELTGQDT 187

Query: 82  SL--IEPQNIALILDGIAKNWTVSSNVEITIEA----NPSSVEVNNFQGYRKAGV-NRIS 134
           +   ++      ++D + K   +  +  I I          +  N  +  R   V   I 
Sbjct: 188 AAYGLDLGGSISLVDVVNKVTEIDGDFMIRIGMMTPEQAMRIIDNLIEVMRNPKVYKFIH 247

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQ 192
           L VQS +++ L+ + R +   E    +   R+   F  ++ D+I   P +    +   L 
Sbjct: 248 LPVQSGDDRVLKLMNRKYTIDEYKELVSEIRSKIPFANITTDIIIGHPGEDEDAFNNTLL 307

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  + + L   +I   T    M +  D
Sbjct: 308 LMKELRFERIHLAMYSIRPNTRSASMPQVPD 338


>gi|256752104|ref|ZP_05492971.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|320115482|ref|YP_004185641.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|256749013|gb|EEU62050.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|319928573|gb|ADV79258.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 347

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  +Q          +      + +I    G    
Sbjct: 64  YCSNTCFYCGLRGPNKTIKRYRMEPEEILQCV--------KYGASVGLKTIVLQSGEDKY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 116 FKITTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 168

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 169 LYQKLHPGMSYENRVRCLMDLRELGYEVGTGSLVGLPGQTLEMLAQDLIFFKKIDADMLG 228

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 229 IGPFIPCENTPLER 242


>gi|229169484|ref|ZP_04297189.1| hypothetical protein bcere0007_44320 [Bacillus cereus AH621]
 gi|228613983|gb|EEK71103.1| hypothetical protein bcere0007_44320 [Bacillus cereus AH621]
          Length = 319

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 8/195 (4%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNIALI 92
           C F S         +          +   ++           +F   T +    + +   
Sbjct: 54  CTFCSAAGSGDFAGDRRDDVITQYHEMKEKMHSKWKDGKCIAYFQAYTNTHAPLEVLKEK 113

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            + +     V   V ++I   P  +            K     + LG+Q++ E++   + 
Sbjct: 114 FEPLLAEKDV---VGLSIATRPDCLPDDVVEYLADLNKRTYLWVELGLQTVHERTANLIN 170

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R H+    +  ++  R    R+   +I  LP +         +      +  + ++ L +
Sbjct: 171 RAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETTREVAKLDLQGIKIHLLHL 230

Query: 210 EKGTLFYKMHKDGDL 224
            KGT   K ++ G L
Sbjct: 231 LKGTPMVKQYEKGQL 245


>gi|77461171|ref|YP_350678.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas fluorescens
           Pf0-1]
 gi|123744592|sp|Q3K6B7|MIAB_PSEPF RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|77385174|gb|ABA76687.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 442

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 70/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVIAEIIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
               L     +A + + I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YR-GLTHDGRLADLAELIRVVAAVDGIDRIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH A E  + +   R   P +    D I   P +T   +E  ++ 
Sbjct: 265 PVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGICISSDFIVGFPGETEKDFEQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  D    L  E +    + L Q 
Sbjct: 325 IADVGFDFSYSFVYSQRPGTPAADLADDTPEELKKERLNALQHRLNQQ 372


>gi|222628903|gb|EEE61035.1| hypothetical protein OsJ_14875 [Oryza sativa Japonica Group]
          Length = 613

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR----QLTGPRSISSIFFGGGTPS 82
           C+  C YC      +  +    ++ I+S +  ++ +     +     S  +  +G    +
Sbjct: 188 CLGACTYC----KTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGT 243

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGV 137
                N+  +L+GIA       +  + I        + + +            + + + V
Sbjct: 244 -----NLPNLLNGIAAELPADRSTMLRIGMTNPPFILEHLKEIASVLCHPCVYSFLHVPV 298

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L  + R +  SE    +     +    +++ D+I   P +T   +   +    
Sbjct: 299 QSGSDAVLTAMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGETDEDFSQTVNLVK 358

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
            Y    + + Q     GT   +M
Sbjct: 359 QYLFPQVHISQFYPRPGTPAARM 381


>gi|187778464|ref|ZP_02994937.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
           15579]
 gi|187772089|gb|EDU35891.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
           15579]
          Length = 432

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTP 81
           C + C YC   F       K  +          M+ +R+L+        +S I       
Sbjct: 152 CNRFCSYCLIPFARGAVCSKKPE--------KVMEEVRKLSKHGFKEIILSGIDIASYGF 203

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQ 138
            L    N+  IL+ I K   +      +I  +P+             +K       L +Q
Sbjct: 204 DLEGKYNLTSILEDIDKVEGIERIRIGSI--DPTFFTEEEIIRISKLKKF-CPHFHLSLQ 260

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   ++L+ + R +   +    ++  R     +S   D+I   P +T  ++    +    
Sbjct: 261 SGCNETLKRMNRKYTVEQYKEIVYNLRTNIEAVSITTDIIVGFPGETEEEFNKTYEFLKD 320

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +  + +++ +  K T   KM    D
Sbjct: 321 IKLSKMHVFKFSPRKATRAEKMENQVD 347


>gi|115458480|ref|NP_001052840.1| Os04g0434300 [Oryza sativa Japonica Group]
 gi|113564411|dbj|BAF14754.1| Os04g0434300 [Oryza sativa Japonica Group]
          Length = 621

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR----QLTGPRSISSIFFGGGTPS 82
           C+  C YC      +  +    ++ I+S +  ++ +     +     S  +  +G    +
Sbjct: 196 CLGACTYC----KTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGT 251

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGV 137
                N+  +L+GIA       +  + I        + + +            + + + V
Sbjct: 252 -----NLPNLLNGIAAELPADRSTMLRIGMTNPPFILEHLKEIASVLCHPCVYSFLHVPV 306

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L  + R +  SE    +     +    +++ D+I   P +T   +   +    
Sbjct: 307 QSGSDAVLTAMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGETDEDFSQTVNLVK 366

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
            Y    + + Q     GT   +M
Sbjct: 367 QYLFPQVHISQFYPRPGTPAARM 389


>gi|38345374|emb|CAD40910.2| OSJNBa0088K19.13 [Oryza sativa Japonica Group]
          Length = 626

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR----QLTGPRSISSIFFGGGTPS 82
           C+  C YC      +  +    ++ I+S +  ++ +     +     S  +  +G    +
Sbjct: 201 CLGACTYC----KTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGT 256

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-----NRISLGV 137
                N+  +L+GIA       +  + I        + + +            + + + V
Sbjct: 257 -----NLPNLLNGIAAELPADRSTMLRIGMTNPPFILEHLKEIASVLCHPCVYSFLHVPV 311

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L  + R +  SE    +     +    +++ D+I   P +T   +   +    
Sbjct: 312 QSGSDAVLTAMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGETDEDFSQTVNLVK 371

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
            Y    + + Q     GT   +M
Sbjct: 372 QYLFPQVHISQFYPRPGTPAARM 394


>gi|125972674|ref|YP_001036584.1| RNA modification protein [Clostridium thermocellum ATCC 27405]
 gi|256004833|ref|ZP_05429807.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           2360]
 gi|125712899|gb|ABN51391.1| RNA modification enzyme, MiaB family [Clostridium thermocellum ATCC
           27405]
 gi|255991143|gb|EEU01251.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           2360]
 gi|316941090|gb|ADU75124.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           1313]
          Length = 434

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 69/192 (35%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +S    ++ +  L        +  G    S  +  
Sbjct: 153 CNQFCTYC----IIPYARGPVRS--RSEENILKEVSGLAHSGYKEVVLTGIHVASYGKDI 206

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D I K   +     I +    P++V     +  +       +  + +QS  + +
Sbjct: 207 KNTSLIDIIRKVHEIEGIERIRLGSIEPTTVTEEFVRAIKGMEKLCPQFHISLQSGCDST 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E + ++ L R     ++   D++   P +T  ++    +         +
Sbjct: 267 LKRMNRKYTTKEYLRSVELLRENLKDVAVTTDVMVGFPGETDEEFNETCRFVEKVLFARM 326

Query: 203 SLYQLTIEKGTL 214
            +++ +  KGT 
Sbjct: 327 HVFKYSRRKGTP 338


>gi|327398199|ref|YP_004339068.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Hippea
           maritima DSM 10411]
 gi|327180828|gb|AEA33009.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Hippea
           maritima DSM 10411]
          Length = 421

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 14/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +     ++ +++LT   +   +  G    S  +  
Sbjct: 142 CNNFCTYC-----IVPYTRGREISRKK-EAIIEEIKRLTDKGTKEVMLLGQNVNSYGKGL 195

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               + D + +   +     I     +P           R        I L +QS   + 
Sbjct: 196 EYNFV-DLLYEVNKIDGLKRIRFTTSHPKDFSKELIDAMRDLDKVCEHIHLPLQSGSNKI 254

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   + +  + L +   P   ++ D+I   P++T   +   +    +   D  
Sbjct: 255 LKLMRRGYTKEDYLEKVMLFKETIPQGSITTDIIVGFPQETEEDFLETIDVLKTVEYDTS 314

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             ++ +    T   +M    D    ++   ++     Q+  +   L  YE
Sbjct: 315 FSFKYSKRPLTKASQMKGQIDEK--TKLKRLNYLQELQAQITQKKLKNYE 362


>gi|329113598|ref|ZP_08242378.1| Putative methylthiotransferase [Acetobacter pomorum DM001]
 gi|326697120|gb|EGE48781.1| Putative methylthiotransferase [Acetobacter pomorum DM001]
          Length = 414

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 73/201 (36%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C            +   + + +   + +R L        +  G    S    +
Sbjct: 140 CNHRCTFC---IIPFGRGPSRSVPVGAVV---EQVRALVQSGYREVVLTGVDMTSW--GE 191

Query: 88  NIAL---ILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           ++     +     +   +   +E       +P  ++ + +Q   +    +  + L +Q+ 
Sbjct: 192 DLPGKPVLGQLCRRVLRLVPELERMRLSSVDPVEIDEDIWQLLAEEPRFMPYLHLSLQAG 251

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H  ++A   +  AR++ P +    D+I   P +  + +E         A
Sbjct: 252 SDLILKRMKRRHLVADAARVVERARSLRPDIGIGADIIAGFPTEDESLFEETRNFLAQQA 311

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + +L ++  +   GT   +M 
Sbjct: 312 LPYLHVFPYSERPGTPAARMR 332


>gi|317121910|ref|YP_004101913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
           marianensis DSM 12885]
 gi|315591890|gb|ADU51186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
           marianensis DSM 12885]
          Length = 517

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 72/224 (32%), Gaps = 18/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F          +    +  + E++++    G + ++ +      +G    +
Sbjct: 211 CDK---YCTFCIVPTTRGRERSRRPEDVIAEVEYLAA-EGYKEVTLLGQNVNSYGKDLGT 266

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++   LD +     +         ++P        +   ++        L VQS 
Sbjct: 267 GFDFADLLARLDRVPGIRWIRYTT-----SHPRDFTDKLIRTIAESDKVTEHFHLPVQSG 321

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               LR++ R +     +  I   R   P   ++ D+I   PK+T   +   L       
Sbjct: 322 SNAVLRWMNRRYTREYYLRLIEKIREAVPDACITTDIIVGFPKETEEDFRQTLDLVRQVE 381

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            D+   +  +  +GT   +  +    V       +       ++
Sbjct: 382 YDNAFTFIYSPREGTPAARWPQLPREVKQERLERLMEVQYAINL 425


>gi|269139970|ref|YP_003296671.1| rRNA modification protein [Edwardsiella tarda EIB202]
 gi|267985631|gb|ACY85460.1| rRNA modification protein [Edwardsiella tarda EIB202]
 gi|304559803|gb|ADM42467.1| tRNA-i(6)A37 methylthiotransferase [Edwardsiella tarda FL6-60]
          Length = 474

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 64/206 (31%), Gaps = 26/206 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC                    L E+  +    G R ++ +           F 
Sbjct: 157 CNKYCTYC---VVPYTRGAEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGATFD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG   +     +  ++  I        +      ++P     +    Y      V+ + L
Sbjct: 213 GG---ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFSDDIIAVYEDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + R H A E  A I   R   P   +S D I   P +T   +E  +Q 
Sbjct: 265 PVQSGSDRVLNLMKRTHTALEYKAIIRKLRRARPDIQISSDFIVGFPGETQQDFEQTMQL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D    +  +   GT    M 
Sbjct: 325 IAEVDFDMSYSFIFSARPGTPAADMV 350


>gi|288801850|ref|ZP_06407292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
           D18]
 gi|302346093|ref|YP_003814446.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
           ATCC 25845]
 gi|288335892|gb|EFC74325.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
           D18]
 gi|302149644|gb|ADK95906.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
           ATCC 25845]
          Length = 442

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   ++S L E++      G + ++    ++   G  P+ 
Sbjct: 155 CNNFCHYC---IVPFTRGRERSRDVESILKEVK-DLHDKGFKEVTLLGQNVNSYGLLPNG 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + + K      ++ +     NP  +  +  +         N I    QS 
Sbjct: 211 KRPENGVSFAELLHKVAQSVPDMRVRFTTSNPEDMTEDIIEAVATEPNLCNHIHFPAQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +   + +  +   R + P      D+      ++   ++  L       
Sbjct: 271 SNSVLKVMNRKYTREDYLEKVAAIRRLVPDCGLTTDIFIGYHNESEEDFQQTLSLMREVG 330

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   K
Sbjct: 331 FDSAFMFKYSERPGTYAAK 349


>gi|297617255|ref|YP_003702414.1| RNA modification enzyme, MiaB family [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145092|gb|ADI01849.1| RNA modification enzyme, MiaB family [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 447

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 75/217 (34%), Gaps = 17/217 (7%)

Query: 11  MTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           +  + +  +  +V+  F C   C YC     +  +  G+E   +     +  ++ L    
Sbjct: 146 LPARRTGGVSAFVNIMFGCNNFCSYC-----IVPFTRGRERS-RKPSDIIDEVKDLVQQG 199

Query: 70  SISSIFFGGGTPSL---IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
                  G    S    +EP+ + A +L+ + +   +      T  ++P  V        
Sbjct: 200 VKEVTLLGQNVNSYGKGLEPETDFASLLELVNEIPGLERIRFTT--SHPRDVSERLLSTI 257

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
                    I   +Q+   + L+ + R +     +  +H  R I P ++   DLI   P 
Sbjct: 258 ASCRKVCEHIHAPLQAGSNRILKAMNRGYTREYYLDLVHKMREIVPGVAVTTDLIVGFPG 317

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++   +E  +        D    +  +   GT   ++
Sbjct: 318 ESDRDFEDTIDMVKRIRFDAAFTFMYSPRSGTKAARL 354


>gi|291459240|ref|ZP_06598630.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418494|gb|EFE92213.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 479

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 16/204 (7%)

Query: 23  VHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           V+  + C   C YC     +  Y  G+E   +S    ++  R L        +  G    
Sbjct: 194 VNISYGCNNFCTYC-----IVPYVRGREKS-RSSEEILRECRDLVRDGVKEIMLLGQNVN 247

Query: 82  SL-IEPQNI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLG 136
           S  ++ + +    +L  +++   +       +  NP             R+     I L 
Sbjct: 248 SYGLDREELRFPELLRRVSEIPGLRRIRF--MTPNPKDFSEELIDLIGERENICRHIHLP 305

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +QS   + LR + R++     +A +   R   P +S   D+I   P ++   ++  +   
Sbjct: 306 LQSGSTEVLRRMNRHYTKESYLALVRRIREKLPDVSLTTDIIVGFPGESERDFQDTMDVV 365

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                D    +  +   GT   K 
Sbjct: 366 RRVGFDSAFTFVYSKRSGTPAAKW 389


>gi|194335519|ref|YP_002017313.1| RNA modification enzyme, MiaB family [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|229890587|sp|B4SCB6|MIAB_PELPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|194307996|gb|ACF42696.1| RNA modification enzyme, MiaB family [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 440

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 15/197 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     V  +  G+E     F   M  +++L           G    S  +P+
Sbjct: 159 CNNMCAYC-----VVPFTRGRERS-HPFRAVMGEVQKLVASGYSEITLLGQNVNSYDDPE 212

Query: 88  N---IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                A +LD ++     +     T  ++P  +     +         N I L VQS   
Sbjct: 213 QGVNFAALLDAVSCAAPQARVRFTT--SHPKDISGELVRTIANRPNICNHIHLPVQSGST 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +L  + R H   E +  I L R++     +S D+I     +     +  L+   +   D
Sbjct: 271 ATLGRMNRGHTIEEYLEKIALIRSLLPGVTLSTDIIAGFCGEQEEDHQASLELLSTLRFD 330

Query: 201 HLSLYQLTIEKGTLFYK 217
              ++  +   GT   +
Sbjct: 331 SAYMFYYSTRPGTFAAR 347


>gi|304316648|ref|YP_003851793.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778150|gb|ADL68709.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 452

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 11/201 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +     + L E++ +R       I +   G    S  +  
Sbjct: 172 CNQFCTYC---IIPYARGPVRSRRPDNILDEVKRLRDNGYKEVILT---GIHVASYGKDL 225

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I     V     I +    P+ +  +  +             + +QS  + +
Sbjct: 226 ENINLLDIIKMIHEVDGIERIRMSSIEPTFLTEDFIKEVASLPKFCRHYHVSLQSGSDST 285

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR +  SE +  I   R     ++   D++   P +T  ++    +   S     +
Sbjct: 286 LKRMGRKYTTSEYMEIIDRIRKYIKDVAITTDVMVGFPGETDEEFNETYEFLKSIEFSKM 345

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            +++ +   GT          
Sbjct: 346 HVFKYSRRAGTKAANYPDQVK 366


>gi|253574631|ref|ZP_04851971.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845677|gb|EES73685.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 447

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 69/200 (34%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    QS + + + +        + +    GG    +E  
Sbjct: 154 CNNFCTFC---IIPWSRGLSRSRDPQSVIQQARQLVAAGYKEIVLTGIHTGGYGDDLENY 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            ++ +L  + K   +      +IEA+   ++       + +        + +Q+   + L
Sbjct: 211 RLSDLLWDLDKVEGLGRIRISSIEAS--QIDDRMLDVLKNSSKMCRHFHIPLQAGSNEVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    I + R+  P ++   D+I   P +T   +    +         + 
Sbjct: 269 KRMRRKYTIEEFEHKIKMIRDFMPDVAITTDVIVGFPGETDELFREGFEAIKRIGFSEMH 328

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 329 VFPYSKRSGTPAARMEDQVD 348


>gi|238917054|ref|YP_002930571.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
 gi|238872414|gb|ACR72124.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
          Length = 450

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSL 83
           C K C YC     + + +    ++ ++  + + + +        I         G    L
Sbjct: 161 CDKHCTYC----IIPKVRGNFRSYPVEYLVEQAKHLVHNGAKELILVAQETTLYGTD--L 214

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              +++ +++  +AK   +     I I+   P  +     +  +      + + + +Q  
Sbjct: 215 YGKKSLPMLIHELAKIEDLKW---IRIQYCYPEEINDELIEAIKNEPKVCHYLDMPIQHA 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR  +  E +  +   R   P ++    LI   P +T    E  ++      
Sbjct: 272 SDNVLKRMGRKTDKQELLDIVAKLRKEIPDIALRTTLIAGFPGETQADHEEVMEFIDEIE 331

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            D L ++  + E+ T    M    D  + 
Sbjct: 332 FDRLGVFTYSREEDTPAATMPDQIDQDIM 360


>gi|237749004|ref|ZP_04579484.1| radical SAM family protein [Oxalobacter formigenes OXCC13]
 gi|229380366|gb|EEO30457.1| radical SAM family protein [Oxalobacter formigenes OXCC13]
          Length = 298

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 74/217 (34%), Gaps = 7/217 (3%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC YCD  +  ++    +    +  + E++W  +      I  +F   G    + P+ + 
Sbjct: 34  KCTYCDMYTQPQKRFSVKPE--EDVIKEIEWFSRNYSG--IQRVFLADGDVISLSPRRLL 89

Query: 91  LILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            IL+ I +    V+         N S+    + +    AG+  + +G +S ++  L+ + 
Sbjct: 90  NILNAIREYLPNVTRVASYCSPRNVSNKSDADLKALYDAGLKLVYVGAESGDDFVLKSIN 149

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQL 207
           +       + +++   +   + S  +I        +          A     + L+   L
Sbjct: 150 KGDTHDSVVDSLNRLADAGIKRSVMIINGAGGTRFSEQHALNSALLANKTQPEFLATLVL 209

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +  G   Y+   +G  +  S+               
Sbjct: 210 NLPHGEDRYQKGYEGQFIRMSQYERFKEVRQFIDALE 246


>gi|167769535|ref|ZP_02441588.1| hypothetical protein ANACOL_00869 [Anaerotruncus colihominis DSM
           17241]
 gi|167668503|gb|EDS12633.1| hypothetical protein ANACOL_00869 [Anaerotruncus colihominis DSM
           17241]
          Length = 346

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     E +  +    +   R        + +  GG  P     
Sbjct: 61  YCRCDCYYCG----IRRSNRQAERYRLTQEEILACCRAGYALGFRTFVLQGGEDP-YFTD 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  ++  I  +W      +  +  +    E ++++ YRKAG +R  L  ++      R
Sbjct: 116 ERICELVRAIKSSWP-----DCAVTLSIGEKEHSSYRLYRKAGADRYLLRHETASPAHYR 170

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L             +   + +  ++    +   P QT      +L      +     + 
Sbjct: 171 RLHPPEQTPQRRRQCLWSLKELGYQVGAGFMVGSPYQTPENLADDLLFLHELSPQMAGIG 230

Query: 206 QLTIEKGTLFYKMH 219
                  T F    
Sbjct: 231 PFIPHHQTPFSAFP 244


>gi|85704067|ref|ZP_01035170.1| MiaB-like tRNA modifying enzyme [Roseovarius sp. 217]
 gi|85671387|gb|EAQ26245.1| MiaB-like tRNA modifying enzyme [Roseovarius sp. 217]
          Length = 423

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  +  G    + + +  ++ +++L G      +  G    S    +
Sbjct: 152 CDHRCTFC-----IIPFGRGNSRSVPAGV-VVEQIKRLVGAGYNEVVLTGVDLTSWGADL 205

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 206 PATPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSL 260

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+   
Sbjct: 261 QHGDDLILKRMKRRHLREDAIRFAEEARRLRPEMTFGADIIAGFPTETEAHFENSLRLVE 320

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              +  L ++  +   GT   +M +
Sbjct: 321 DCHLTWLHVFPYSPRPGTPAARMPQ 345


>gi|332298374|ref|YP_004440296.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168]
 gi|332181477|gb|AEE17165.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168]
          Length = 515

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF--LTEMQWMRQLTGPRS-ISSIFFGGGTPSL- 83
           C   C YC    H+ R K    +       +  ++   Q     + ++   + G   S  
Sbjct: 199 CNNACTYC--RIHLARGKAVSLDAASVLERVRSIEARNQHEVVLTGVNLSQYRGSFGSFF 256

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEE 142
           ++   +   L    +               P  V+    +      +     L VQS  +
Sbjct: 257 LDIAGLLRFLLDNTERIRFR-----LSSLYPERVDDALCEVIAHERIMPHFHLSVQSGSD 311

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + +++  AA+   R +     ++ D+I   P ++   +   ++   S    
Sbjct: 312 RILTLMRRPYTSADVAAAVERLRAVKRNPFIACDIIAGFPGESDDDFGQTMELCRSCRFA 371

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +  +  +   GT  Y M      V+P    A  +  LT+   +     AY IS++
Sbjct: 372 WIHAFPFSPRPGTPAYAM----KPVVPQSTAAHRVRRLTE--FAIASKCAY-ISSY 420


>gi|283131230|dbj|BAI63281.1| putative Mg-protoporphyrin IX monooxidative cyclase [Streptomyces
           sp. SNA15896]
          Length = 679

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 15/242 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLI-- 84
           C  KC +C        +       +QSF    ++   +L     + +I        ++  
Sbjct: 212 CPYKCSFC-------YWGGAVGQRVQSFSRARLRAELELFARLKVHTIVLCDANFGMLRA 264

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQ 143
           + + +  ++D   + +     VE +   N S V  N  +  +K G+    +L +Q+L++ 
Sbjct: 265 DEEFVDDVIDL-RERYGYPRAVEASWAKNKSKVFFNIVRKMKKHGMRSSFTLALQTLDDT 323

Query: 144 SLRFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + R N   ++                 +LI+  P +T+  +     R   + V  +
Sbjct: 324 ALHLMNRKNMKVNDWEDLAAWLNREGLDAYAELIWGAPGETVESFLEGYDRLSRH-VSRI 382

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-EISNHSFLGA 261
           ++Y L +   T + +   +  +V    NV    Y L+ +  S             + + A
Sbjct: 383 AVYPLHLLPNTDYAEKKAEYGIVSVRGNVDDFEYILSHNTMSFADNRRMKRFLFWARVMA 442

Query: 262 ES 263
           E+
Sbjct: 443 EN 444


>gi|289578859|ref|YP_003477486.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289528572|gb|ADD02924.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 349

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  IQ          +      + +I    G    
Sbjct: 64  YCNNTCFYCGLRGPNRTIKRYRMEPEEIIQC--------AKYGAAAGLKTIVLQSGEDKY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 116 FKINTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 168

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 169 LYQKLHPGMSYENRVRCLMDLRELGYEVGTGSLVGLPGQTLEMLADDLIFFKKIDADMLG 228

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 229 IGPFIPCENTPLER 242


>gi|163753931|ref|ZP_02161054.1| 2-methylthioadenine synthetase [Kordia algicida OT-1]
 gi|161326145|gb|EDP97471.1| 2-methylthioadenine synthetase [Kordia algicida OT-1]
          Length = 481

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 80/234 (34%), Gaps = 25/234 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C +C            +    QS L E+Q +         L G    S +++GGG 
Sbjct: 178 CDNMCTFC---VVPFTRGRERSRDPQSILEEIQELSDKNFKEITLLGQNVDSYLWYGGGL 234

Query: 81  ------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                  S +      + A +LD +A  +        T  +NP  +  + F    K    
Sbjct: 235 KKDFDKASEMQKATAVDFAKLLDMVATKFPKLRLRFST--SNPQDMHESVFHVMAKHRNI 292

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQW 187
              I L VQS   + L+ + R H   E  A I   + I     +S DLI   P +T    
Sbjct: 293 CKHIHLPVQSGSNRILKEMNRLHTREEYFALIDKIQEILPGCGVSQDLIAGFPTETEEDH 352

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +  L        D   ++  +   GT+  +  +D       +    ++  L + 
Sbjct: 353 QDTLSLMEYVKYDFGYMFTYSERPGTMAGRKMEDDVPEATKKRRLAEIIELQRK 406


>gi|227826584|ref|YP_002828363.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           M.14.25]
 gi|227829226|ref|YP_002831005.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           L.S.2.15]
 gi|229577995|ref|YP_002836393.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           Y.G.57.14]
 gi|229583207|ref|YP_002841606.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           Y.N.15.51]
 gi|229583748|ref|YP_002842249.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           M.16.27]
 gi|238618670|ref|YP_002913495.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus M.16.4]
 gi|284996581|ref|YP_003418348.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           L.D.8.5]
 gi|227455673|gb|ACP34360.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           L.S.2.15]
 gi|227458379|gb|ACP37065.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           M.14.25]
 gi|228008709|gb|ACP44471.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           Y.G.57.14]
 gi|228013923|gb|ACP49684.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           Y.N.15.51]
 gi|228018797|gb|ACP54204.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           M.16.27]
 gi|238379739|gb|ACR40827.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus M.16.4]
 gi|284444476|gb|ADB85978.1| RNA modification enzyme, MiaB family [Sulfolobus islandicus
           L.D.8.5]
          Length = 421

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 19/211 (9%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C +C         K+ +       L E+    +         I   G   
Sbjct: 135 IPVADGCAGNCSFC-------ITKLARRKLRSYPLREIVNAARDAVKAGAKEIELTGQDT 187

Query: 82  SL--IEPQNIALILDGIAKNWTVSSNVEITIEA----NPSSVEVNNFQGYRKAGV-NRIS 134
           +   ++      ++D + K   +  +  I I          +  N  +  R   V   I 
Sbjct: 188 AAYGLDLGGSISLVDVVNKVTEIDGDFMIRIGMMTPEQAMRIIDNLIEVMRNPKVYKFIH 247

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQ 192
           L VQS +++ L+ + R +   E    +   R+   F  ++ D+I   P +    +   L 
Sbjct: 248 LPVQSGDDRVLKLMNRKYTIDEYKELVSEIRSKIPFANITTDIIIGHPGEDEDAFNNTLL 307

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  + + L   +I   T    M +  D
Sbjct: 308 LMKELRFERIHLAMYSIRPNTRSASMPQVPD 338


>gi|119358045|ref|YP_912689.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119355394|gb|ABL66265.1| Radical SAM domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 498

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 68/195 (34%), Gaps = 10/195 (5%)

Query: 32  CPY-CDFNSHVR----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY CDF +       + +    + I + L  +  M  L     +   F      S ++ 
Sbjct: 175 CPYQCDFCNVTALLGHKIRTKTSDQIIAELDGLHKMGWLDSIFFVDDNFIAHK--SYLKK 232

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  ++     N T ++        N +  +         AG  ++ +G+++ ++ +L+
Sbjct: 233 DLLPRLIAWQKNNRT-TTKFYTECSINLAD-DPELLDLMVLAGFTQVFIGIETPDDTALQ 290

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             G+ H  + + +  +   +     +    I      T + +  ++       +    + 
Sbjct: 291 ACGKQHNTSRDMLENVRKIQQAGIEVQGGFIVGFDSDTPSIFRKQIDFIQKSGIVTAMVG 350

Query: 206 QLTIEKGTLFYKMHK 220
            L    GT  Y+  +
Sbjct: 351 VLQALPGTKLYERMQ 365


>gi|304403939|ref|ZP_07385601.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus
           YK9]
 gi|304346917|gb|EFM12749.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus
           YK9]
          Length = 464

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + + + + +      + +    GG    +E  
Sbjct: 154 CNNFCTFC---IIPWSRGLSRSRDPKSVIAQAEQLVEAGYKEIVLTGIHTGGYGDDLENY 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            ++ +L  + K   +      +IEA+   ++        ++      + + +Q+ E+  L
Sbjct: 211 RLSDLLWDLDKVEGLERIRISSIEAS--QIDDKMIDVLNRSSKMCRHLHIPLQAGEDAVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +E    + +     P ++   D+I   P +T   +E   +         + 
Sbjct: 269 KRMRRKYTTAEFAEKVKMLHRAMPGVAITTDVIVGFPGETDEMFEEGYRFMQEIGFSEMH 328

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 329 VFPYSKRTGTPAARMEDQVD 348


>gi|302391395|ref|YP_003827215.1| MiaB-like tRNA modifying enzyme [Acetohalobium arabaticum DSM 5501]
 gi|302203472|gb|ADL12150.1| MiaB-like tRNA modifying enzyme [Acetohalobium arabaticum DSM 5501]
          Length = 436

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 76/228 (33%), Gaps = 13/228 (5%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +   R  V       +     +          ++ I  G     + E
Sbjct: 153 CDNFCAYC----IIPYTRGSVRSRRIEDAVAEAKRLAASGFKEIVLTGIHLGAYGKEVEE 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
             ++  +L  + +   +      +IEA    V  +        +     + L +Q+  ++
Sbjct: 209 EIDLVTLLKELIEISGLERIRLSSIEAT--EVTSDLIDLIATEEKLCRHLHLPLQNGSDK 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R++   +    +   R+  P+++   D++   P +T   +E   Q     A   
Sbjct: 267 ILAAMNRDYTVQQYADKVAEIRSNIPQIALTTDVMVGFPGETDEDFEATYQLIEELAFSD 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           L +++ +  +GT   K        L  +  +  L  L   + S +   
Sbjct: 327 LHVFKYSKREGTAAAKFSNQVHSKL-KKERSAKLRKLADDLASQYRKK 373


>gi|153823302|ref|ZP_01975969.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae B33]
 gi|126519166|gb|EAZ76389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae B33]
          Length = 313

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 74  CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 127

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 128 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 186

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 187 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 246

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 247 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 294


>gi|77464514|ref|YP_354018.1| MiaB-like radical SAM protein [Rhodobacter sphaeroides 2.4.1]
 gi|77388932|gb|ABA80117.1| MiaB-like Radical SAM protein [Rhodobacter sphaeroides 2.4.1]
          Length = 425

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 29/230 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  ++ +R+L        +  G    S    +
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIRRLVDRGFAEVVLTGVDLTSWGADL 199

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISL 135
                    +  IL  +     +  +   +IEA+ + +                +  + L
Sbjct: 200 PAAPRLGDLVMRILRLVPDLARLRISSIDSIEADEALMGAIATEARL-------MPHLHL 252

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q  ++  L+ + R H   +AI     AR + P + F  D+I   P +T   +   L+ 
Sbjct: 253 SLQHGDDLILKRMKRRHLRDDAIRFCEEARRLRPDIVFGADIIAGFPTETEAAFANSLKL 312

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                +  L ++  +  +GT   +M +           A  L  L ++  
Sbjct: 313 VEECGLTFLHVFPFSPRQGTPAARMPQL--AGPVIRERAAQLRALGEARL 360


>gi|325914746|ref|ZP_08177084.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325539023|gb|EGD10681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 489

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 70/223 (31%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K C +C       R +     F    +   Q  
Sbjct: 171 IEKFDRLPEPRADGP-SAFVSIMEGCSKYCSFC--VVPYTRGEEVSRPFEDVLVEVAQLA 227

Query: 63  RQLTGPRSISSI------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            Q  G R I+ +      + G       E    A +   I     +     I     +P 
Sbjct: 228 AQ--GVREINLLGQNVNAYRGAYGADADEAAQYADLGLLIRTIAQIEGIGRIRFTTSHPL 285

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
               +    YR      N + L VQ+  ++ L  + R + A E  + I   R + P +S 
Sbjct: 286 EFSDSLVDAYRGVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISI 345

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             D I   P +T   +E  ++       D    +  +   GT 
Sbjct: 346 SSDFIVGFPGETEADFEKTMKLIEDVGFDQSFSFVYSRRPGTP 388


>gi|306821404|ref|ZP_07455010.1| radical SAM protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550554|gb|EFM38539.1| radical SAM protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 320

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 74/245 (30%), Gaps = 25/245 (10%)

Query: 28  CVKK--------CPYCD----------FNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGP 68
           C  +        C +C           F +         E   I++ +     +      
Sbjct: 32  CPTRDKSKGSSGCIFCSQRGSGEFAGLFETIDSNINDKLEKINIEAQIENQIKLLSKKWS 91

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--- 125
            +    +F   T +  +P  +  +         +   + + I   P  +  +  +     
Sbjct: 92  NAKYIAYFQNFTNTYEKPSYLQALYQKALSQKDI---IGLDIATRPDCLGDDILEVLDYF 148

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
            K     + LG+QS+ E+S +F+ R ++      AI     +  +     I  LP +   
Sbjct: 149 NKKTYLIVELGLQSIHEKSEKFIRRGYDIEVFEKAIDDLSRLNIKTVVHTIVGLPTEDRD 208

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                 +      +  + + QL I K T   K ++     L + +  VD       +   
Sbjct: 209 DMLATYKYLNKKNIHGVKIQQLNILKNTDLEKYYEKNKFELMTADEYVDFVCDIIQLLRK 268

Query: 246 HGLHA 250
             +  
Sbjct: 269 DIVIH 273


>gi|256390815|ref|YP_003112379.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Catenulispora
           acidiphila DSM 44928]
 gi|256357041|gb|ACU70538.1| RNA modification enzyme, MiaB family [Catenulispora acidiphila DSM
           44928]
          Length = 509

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 72/224 (32%), Gaps = 11/224 (4%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C            ++      L+E+
Sbjct: 134 LESLDVFPSTLPTRRESAYAAWVSVSVGCNNTCTFC---IVPALRGKEKDRRPGEILSEI 190

Query: 60  Q-WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           +  + +     ++             + +  A +L    +   +          +P    
Sbjct: 191 EALVAEGVCEVTLLGQNVNAYGSEFGDREAFAKLLRACGQIEGLERVRF--TSPHPRDFT 248

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
            +      +    + ++ + +QS  +  LR + R++     +  I   R   P   ++ D
Sbjct: 249 DDVIAAMAETPNVMPQLHMPLQSGSDTVLRAMRRSYRQDRYLGIIERVRAAMPDAAITTD 308

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +I   P +T   +E  +             +Q +   GT    M
Sbjct: 309 IIVGFPGETEEDFEQTMHVVRQARFSAAFTFQYSKRPGTPAATM 352


>gi|153941109|ref|YP_001391056.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum F
           str. Langeland]
 gi|229890488|sp|A7GE46|MIAB_CLOBL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|152937005|gb|ABS42503.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum F
           str. Langeland]
 gi|295319106|gb|ADF99483.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum F
           str. 230613]
          Length = 450

 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 72/199 (36%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E         ++  +++L           G    S    
Sbjct: 169 CNNFCTYC-----IVPYVRGRER--SRTPENIEAEIKKLISEGYKEITLLGQNVNSYGKD 221

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP    A +L  +     +       + ++P  +  +  +   K      +I L VQS 
Sbjct: 222 LEPNVTFAELLKRVNNIEGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSG 279

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L       
Sbjct: 280 SSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEETLSLVKEVE 339

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D    +  +I KGT   K
Sbjct: 340 YDSAFTFLYSIRKGTPAAK 358


>gi|312882697|ref|ZP_07742434.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309369658|gb|EFP97173.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 461

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 18/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 144 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 197

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 198 HDGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYENTPELVSFLHLPVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P +  S D I   P +T   ++  ++   +   
Sbjct: 258 DRILTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIKAVDF 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT       D    +  +     LY L Q+I S    ++ ++
Sbjct: 318 DMSFSFIFSPRPGTPAA----DYPCDVSEQEKKDRLYELQQTINSQAMRYSRQM 367


>gi|84502860|ref|ZP_01000973.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis
           HTCC2597]
 gi|84388843|gb|EAQ01713.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis
           HTCC2597]
          Length = 440

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F              +   LTE + + +  G R I+ +      + G  P 
Sbjct: 158 CDK---FCAFCVVPYTRGAEVSRPVARVLTEARDLVER-GVREITLLGQNVNAYHGEGP- 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   I +   +     I     +P+ +  +    + + G  +  + L VQS
Sbjct: 213 ---DGRDWSLAGLIRELAEIEGLERIRFTTSHPNDMSDDLIAAHGEVGKLMPYLHLPVQS 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H+    +  I   R   P   +S D I   P++T   +   ++     
Sbjct: 270 GSDRILKRMNRSHDRDSYLRLIDRIRAARPDILISGDFIVGFPEETDADFRDTMRLIEEV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT   + 
Sbjct: 330 RYGQAFSFKYSTRPGTPAAER 350


>gi|323143878|ref|ZP_08078542.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Succinatimonas hippei YIT
           12066]
 gi|322416350|gb|EFY07020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Succinatimonas hippei YIT
           12066]
          Length = 452

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 17/216 (7%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQ---WM 62
           +++   G      +V     C  KC YC    + R  +    +++ ++     +      
Sbjct: 148 DSLPNPGRRGPSAFVTIMEGCSNKCSYC-IVPYTRGEEESRPEKDILEEIKIHIANGVKE 206

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
             L G    S         +     + + +L  IA    V      T  +NP     +  
Sbjct: 207 IHLLGQNVNSYRGISDNGFTC----SFSELLYEIAAVNGVERLRFTT--SNPMEFTDDIV 260

Query: 123 QGYRKAGV--NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYA 178
           Q +    V  + + + VQS  ++ L  + R + +      I   R       +S D+I  
Sbjct: 261 QAFADLDVIADAVHIPVQSGSDRILELMRRRYTSDSYRELIAKLRKARPQIHVSTDIIVG 320

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            P +T   +   +        D    +  +   GT 
Sbjct: 321 FPGETDDDFAKTMSLVDDIKFDQSFSFIYSKRPGTP 356


>gi|253999825|ref|YP_003051888.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4]
 gi|313201799|ref|YP_004040457.1| tRNA-i(6)a37 thiotransferase enzyme miab [Methylovorus sp. MP688]
 gi|253986504|gb|ACT51361.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4]
 gi|312441115|gb|ADQ85221.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. MP688]
          Length = 443

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C       R +     F    +  +Q   Q     ++          +  +  
Sbjct: 159 CNKYCSFC--VVPYTRGEEFSRPFEDILVEAIQLAEQGVKEITLLGQNVNAYRSTSADGT 216

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A+++D IA+   +      T  ++P+ +       + +    V+ + L VQ+  ++
Sbjct: 217 AADLAMLIDYIAEIPQIERIRFTT--SHPNEMSEALIDCFARIPKLVSHLHLPVQAGSDR 274

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + RN+ A +  + I   R   P +    D I   P ++   +   L+       D 
Sbjct: 275 VLMGMKRNYTALQYKSIIRKLRRARPDICITSDFIVGFPGESEQDFAATLKLMQDVGFDF 334

Query: 202 LSLYQLTIEKGTL 214
              +  +   GT 
Sbjct: 335 SYSFTYSARPGTP 347


>gi|168180374|ref|ZP_02615038.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
           NCTC 2916]
 gi|226949042|ref|YP_002804133.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
           botulinum A2 str. Kyoto]
 gi|182668731|gb|EDT80709.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
           NCTC 2916]
 gi|226843034|gb|ACO85700.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A2
           str. Kyoto]
          Length = 450

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 83/244 (34%), Gaps = 30/244 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E         ++  +++L           G    S    
Sbjct: 169 CNNFCTYC-----IVPYVRGRER--SRTPENIEAEIKKLISEDYKEITLLGQNVNSYGKD 221

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +EP    A +L  +     +       + ++P  +  +  +   K      +I L VQS 
Sbjct: 222 LEPNVTFAELLKRVNNIEGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSG 279

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L       
Sbjct: 280 SSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEKTLSLVKEVE 339

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D    +  +I KGT   K           E+V    +N    + +       EIS    
Sbjct: 340 YDSAFTFLYSIRKGTPAAKFEDQ-----VPEDVKHKRFNRLVEVLN-------EISAKKN 387

Query: 259 LGAE 262
              E
Sbjct: 388 KAYE 391


>gi|119357445|ref|YP_912089.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354794|gb|ABL65665.1| Radical SAM domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 468

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 80/240 (33%), Gaps = 21/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     K  +   ++  L EM++ ++  G + I+  F          P+
Sbjct: 206 CPVGCNFC--TTPTIYGKSFRYRELEFVLEEMRYHQERLGKKKINFSFMDDNI--SFRPK 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +AK       V      + + ++         ++G + +S+G +SL  ++L+
Sbjct: 262 YFTTLLEEMAKL-----GVHWNANISMNFLDKPEIAELAGRSGCDLLSIGFESLNPETLK 316

Query: 147 FL----GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            +     R  N       +         +    ++     T   +++     +   ++  
Sbjct: 317 SVQKGSNRLGNYETV---VDNLHKNNIAIQGYFMFGFDNDTEESFQLTYDFIMKNRIEFP 373

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
               +T   GT ++   K        +      Y    +  S   L    +SN   L  E
Sbjct: 374 VFSLVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPNKMSGEKL----LSNFVKLQKE 429


>gi|325971936|ref|YP_004248127.1| radical SAM protein [Spirochaeta sp. Buddy]
 gi|324027174|gb|ADY13933.1| Radical SAM domain protein [Spirochaeta sp. Buddy]
          Length = 548

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +G+QS +   L+   RN N S+    I L          DLI  LP  ++  +   L 
Sbjct: 278 LQIGLQSSDSAVLKAANRNFNPSQFAKKIQLLNQRGIPFGLDLIIGLPHDSLAAFTKSLD 337

Query: 193 RALSYAVDHLSLYQLTIEKGT 213
            A+     +L ++ L++  GT
Sbjct: 338 YAMLLKPSNLDIFPLSLLPGT 358


>gi|298387443|ref|ZP_06996995.1| radical SAM domain protein [Bacteroides sp. 1_1_14]
 gi|298259650|gb|EFI02522.1| radical SAM domain protein [Bacteroides sp. 1_1_14]
          Length = 345

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 69/191 (36%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S    +   +Q  G    + +  GG  P  +  +
Sbjct: 62  CRNNCYYCG----IRKGNPNLERYRLSTENILNCCKQGYGLGFRTFVLQGGEDP-ALTEE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  I+  I +++      +  I  +        ++ + +AG NR  L  ++ +++  + 
Sbjct: 117 RIEDIVSTIHRSYP-----DCAITLSLGEKSREAYERFFQAGANRYLLRHETYDKEHYQQ 171

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   ++I  +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPAGMSCEHRLQCLRDLKDIGYQTGTGIMVGSPGQTIEHLIQDILFIEQLRPEMIGIGP 231

Query: 207 LTIEKGTLFYK 217
               + T F +
Sbjct: 232 FLSHRDTPFAQ 242


>gi|254562377|ref|YP_003069472.1| tRNA modification enzyme MiaB [Methylobacterium extorquens DM4]
 gi|254269655|emb|CAX25627.1| tRNA modification enzyme MiaB, putative isopentenyl-adenosine A37
           tRNA methylthiolase [Methylobacterium extorquens DM4]
          Length = 446

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 76/227 (33%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              + + + E + + +  G R I+    ++    G    
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRSVAAVVDEARRLVE-GGVREITLIGQNVNAYHGDGPD 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  ++D ++    +      T  ++P+    +    +      +  + L VQS  
Sbjct: 213 GAPATLGHLMDALSAVPGLLRLRYTT--SHPNDFADDLIAAHATNPLVMPYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H        I   RN  P +  S D I   P +T   +   ++       
Sbjct: 271 DRILQAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETMRLVSDIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT   +        + +E +A     L +   + +
Sbjct: 331 SAAFSFKYSPRAGTPAAEREDAVPEAVKTERLAALQDLLDRQRHAYN 377


>gi|240138999|ref|YP_002963474.1| hypothetical protein MexAM1_META1p2415 [Methylobacterium extorquens
           AM1]
 gi|240008971|gb|ACS40197.1| Hypothetical protein MexAM1_META1p2415 [Methylobacterium extorquens
           AM1]
          Length = 459

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 68/215 (31%), Gaps = 21/215 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C++ +          ++I     E+   R L  P              L++  
Sbjct: 209 CPLSCRFCEWGTKENSKASFSADYIA---RELDAFRTLEAPAVF-----------LLDAG 254

Query: 88  NIALI-----LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
               I     L    +         +  E  PS V   +     + G   + +G+QS++ 
Sbjct: 255 LNLNIGAFRNLRLANQRSGFLKETLLWAEIYPSIVRDEHLAFIEEIGTAYLGVGMQSMDP 314

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             LR   R  ++    AA+  A      +   +I  LP  T   +   L  ALS     +
Sbjct: 315 AVLRLHDRPSDSPRFEAAVR-ALARVTNIELQIIAVLPGDTPEGFFRTLDYALSL-PASV 372

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +Y   +    L  +   + ++      + +    
Sbjct: 373 RVYHCLVLPDALLTRSRPEWNVRFDPHALTMRSCE 407


>gi|218458623|ref|ZP_03498714.1| putative 2-methylthioadenine synthetase (miaB-like) protein
           [Rhizobium etli Kim 5]
          Length = 204

 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P  ++    + +R     +  + L VQS  ++ L+ + R H A+E ++ I   R + P 
Sbjct: 1   HPRDMDDRLIEAHRDLRALMPYLHLPVQSGSDRILKAMNRRHTAAEYLSLIERIRTVRPD 60

Query: 171 MSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           ++   D I   P +T   +E  L+   +        ++ +   GT   +M
Sbjct: 61  IALSGDFITGFPGETDEDFEDTLELVKTVRYAQAFSFKYSTRPGTPGAEM 110


>gi|296328166|ref|ZP_06870697.1| radical SAM protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154678|gb|EFG95464.1| radical SAM protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 304

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 13/239 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++  Q    +++ + +          +F   T +  +   +  
Sbjct: 43  CIFCSENGSGDFTSGKLKSIHQQIDEQIELVSKKYKGDK-YIAYFQNFTNTYADINYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I +    +  +   V + I   P  +E +  +   +        I LG+Q++ ++  ++ 
Sbjct: 102 IYEEALSHKNI---VGLAIATRPDCLEDDILKLLDELNKKTFLWIELGLQTINDKVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +       A      +  +    +I  LPK+    +      + +Y    L L+ + 
Sbjct: 159 NRAYETKIYEEASQKLNKLNIKFVTHIIIGLPKEKKDDYLKTAIFSQNYGTWGLKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           + K T   K+++ G+L + ++           +I         EI  H   G      L
Sbjct: 219 VVKNTPLEKLYQSGNLKVHTKEE---YIEKIVNILENISP---EIVIHRMTGDGDRETL 271


>gi|302868331|ref|YP_003836968.1| radical SAM domain-containing protein [Micromonospora aurantiaca
           ATCC 27029]
 gi|302571190|gb|ADL47392.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029]
          Length = 644

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 14/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C        +       +++F    ++   +L     + ++        ++  
Sbjct: 220 CPYKCSFC-------YWGGAVGQRVRAFSRERLRAELELFARCGVHTVVACDANFGMLPI 272

Query: 87  --QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQ 143
             + +  ++D   ++       E +   N S V     +  ++AG+    +L +QSL   
Sbjct: 273 DLELVDDLIDIKRRH-GFPLAFESSWAKNKSKVFYEIVRRMKEAGLRSSFTLALQSLNPD 331

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + R     ++    +            +LI+  P  T+  +         + V  +
Sbjct: 332 ALTLMRRRNMKVNDWRDLVRWLNREGLDCYAELIWGAPGDTVESFLAGYDELAQH-VSRI 390

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++Y + +   T + +  +   +V    +     Y L     +  
Sbjct: 391 AVYPIMLLPNTEYAENKELYGIVALRGDNDDFEYVLAHRTMTFA 434


>gi|189183909|ref|YP_001937694.1| hypothetical protein OTT_1002 [Orientia tsutsugamushi str. Ikeda]
 gi|189180680|dbj|BAG40460.1| hypothetical protein OTT_1002 [Orientia tsutsugamushi str. Ikeda]
          Length = 423

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 33/213 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C  +C +C     +  Y  G    +   +  +    QL   +    I F G         
Sbjct: 149 CNHRCTFC-----IIPYARGNSRSVP--IGVITQQIQLLINQGYKEIVFTGVDLTSYGAD 201

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             G+P+L   Q I  +L  +     +        EI  E      +           +  
Sbjct: 202 LPGSPTL--AQMIKRVLMLVPALPRLRLSSIDIAEIDQELFKLMTDEPRL-------MPH 252

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEME 190
             + +Q+ +   L+ + R H   + I   +  R I        D+I   P +T   +   
Sbjct: 253 FHISLQAGDNMILKRMKRRHTREQIIEFCNKMRKILPDASFGADMIAGFPTETEIMFNNS 312

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           L       + +L ++  +  + T   KM +   
Sbjct: 313 LNLISETGIQYLHVFPYSERENTPASKMPQVQK 345


>gi|163741718|ref|ZP_02149108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis
           2.10]
 gi|161384891|gb|EDQ09270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis
           2.10]
          Length = 440

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 73/202 (36%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E Q + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREAQDLVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
               + +A ++  + K   +      T  ++P+ ++ +  + +      +  + L VQ+ 
Sbjct: 215 --GDKTLAQLIWELDKVDGLERIRFTT--SHPNDMQDDLIEAHGTCAKLMPYLHLPVQAG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A   +  I   R   P   +S D I   P++T   ++  L       
Sbjct: 271 SDKILKRMNRAHTAESYLRLIERIRAARPDILISGDFIVGFPEETEADFQATLDLVEEVK 330

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
                 ++ +   GT   +  +
Sbjct: 331 YGTAYSFKYSTRPGTPAAERPQ 352


>gi|154482583|ref|ZP_02025031.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC
           27560]
 gi|149736608|gb|EDM52494.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC
           27560]
          Length = 437

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 13/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   ++S   E++ +           I   G   S  +  
Sbjct: 158 CNNFCSYC---IIPYARGRIRSRTMESIKAELERLSASG----FKEIVLTGINLSCYD-D 209

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N   ++D I     V+    I +   +P  V  +  +   K           +QS  +++
Sbjct: 210 NGKKLIDVIEMADNVNGIERIRLGSLDPEVVTEDFVERLGKVKKICPHFHFSLQSGCDKT 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++ + E      L R        + D+I   P +T   +    +         L
Sbjct: 270 LKAMNRHYTSDEYYEKCQLIRKYIDNPAFTTDVIVGFPGETEEDYISSREFVKKVKFAEL 329

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            +++ +   GT+  KM    D
Sbjct: 330 HVFKYSKRDGTVAAKMPNQID 350


>gi|167037067|ref|YP_001664645.1| biotin synthase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|166855901|gb|ABY94309.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
          Length = 350

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  +Q          +      + +I    G    
Sbjct: 67  YCSNTCFYCGLRGPNKTIKRYRMEPEEILQCV--------KYGASVGLKTIVLQSGEDKY 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 119 FKITTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 171

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 172 LYQKLHPGMSYENRVRCLMDLRELGYEVGTGSLVGLPGQTLEMLAQDLIFFKKIDADMLG 231

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 232 IGPFIPCENTPLER 245


>gi|319943047|ref|ZP_08017330.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lautropia mirabilis ATCC
           51599]
 gi|319743589|gb|EFV95993.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lautropia mirabilis ATCC
           51599]
          Length = 473

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 69/224 (30%), Gaps = 11/224 (4%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F       +    Q     ++   +   + G       P
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPFEDVLSDVITLAEQGVKEVTLLGQNVNAYLGQVEGFDAP 216

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A +LD I     +      T  ++P          + +       + L VQS  ++ 
Sbjct: 217 ADFATLLDYIHDIPGIERIRYTT--SHPREFTERLIDAHAQLPKLAPLVHLPVQSGSDRI 274

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R + A E  + +   R   P +    D I   P +T   +   L+ A   A D  
Sbjct: 275 LAAMKRGYTALEYRSIVRRLRAASPGIGLTTDFIVGFPGETEADFLKTLKLAEDLAYDDA 334

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             +  +   GT    +  +       E +      + QS  +  
Sbjct: 335 YSFIYSPRPGTPAANLQDETPHEEKVERLQRLQAVVQQSSLAIA 378


>gi|188582640|ref|YP_001926085.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Methylobacterium populi BJ001]
 gi|229890615|sp|B1ZJR5|MIAB_METPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|179346138|gb|ACB81550.1| RNA modification enzyme, MiaB family [Methylobacterium populi
           BJ001]
          Length = 446

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 74/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              + + + E + + +  G R I+    ++    G    
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRSVAAVVEEARRLVE-GGVREITLIGQNVNAYHGDGPD 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  ++D ++    +      T  ++P+    +    +      +  + L VQS  
Sbjct: 213 GAPATLGHLMDALSAVPGLLRLRYTT--SHPNDFADDLIAAHAGNPLVMPYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H        I   R   P +  S D I   P ++   +   ++       
Sbjct: 271 DRILHAMNRRHTGDAYRRLIERIRTARPDIALSSDFIVGFPGESDADFAETMRLVAEIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT   +        + +E +A     L Q   + +
Sbjct: 331 AAAFSFKYSPRAGTPAAEREDAVPEAVKTERLAALQQLLDQQRHAFN 377


>gi|270307544|ref|YP_003329602.1| radical SAM/B12 binding domain protein [Dehalococcoides sp. VS]
 gi|270153436|gb|ACZ61274.1| radical SAM/B12 binding domain protein [Dehalococcoides sp. VS]
          Length = 494

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 22/254 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   +         +  ++  +++++    L     +  I F     +     
Sbjct: 193 CPFKCSFC--YNIPFHQGHRADLSVERIVSQIE---HLQKNYKVKFIRFFEDNFTF---- 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +           ++   E+  + +   +     KAG   + +GV++  ++ L +
Sbjct: 244 NRRRMREFCRTIIERRIKIKWDTESR-ADMSEEDVALMAKAGCTSVGIGVETGSKRMLEY 302

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  +  E                  ++ A+P +T   ++                 + 
Sbjct: 303 LNKGIDLDEMGHTFWRFVRHGIMPRLYIMLAVPSETPADFKETQDMLRKMEDPPFMYMRF 362

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAV----DLYNLTQSITSAHGLHAY--EISNHSFLGA 261
               GT  Y+   D   + P E++       +Y  T+   S          +S+ +   A
Sbjct: 363 VPYPGTPLYEELVDNKRIKPPESLEEWAKFSVYFATRGNLSELSDEQITQALSHWAHTYA 422

Query: 262 ES------LHNLNY 269
                    HN  Y
Sbjct: 423 SRRVMFTLRHNPRY 436


>gi|15894568|ref|NP_347917.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|15024215|gb|AAK79257.1|AE007641_3 Fe-S oxidoreductases [Clostridium acetobutylicum ATCC 824]
 gi|325508700|gb|ADZ20336.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
          Length = 436

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC                 +  + E++ + +      I S I        L   
Sbjct: 152 CNRFCSYC---LIPYARGGVCSKNPEKVIGEIKRLAEHGFKEIILSGIHIASYGDDLKGD 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            N+  I++   +   +      +IE  P   + +     +          L +QS   ++
Sbjct: 209 WNLISIIEKAEQIDGIERIRIGSIE--PRFFDEDTISKIKNMKKMCPHFHLSLQSGCTET 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R + A E    ++  R     +S   D+I   P +T  ++E          +  +
Sbjct: 267 LERMNRKYTAEEYKEIVYKLRENISDVSITTDVIVGFPGETDEEFEKTYDFLKEIELAKM 326

Query: 203 SLYQLTIEKGTLFYKM 218
            +++ +  +GT    M
Sbjct: 327 HVFKYSPREGTKAAAM 342


>gi|15679772|ref|NP_276890.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622915|gb|AAB86250.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 461

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 46/112 (41%)

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           +V     +    V+ +  +  R AG++ I  GV+S  ++ L  + +     +A  A+ + 
Sbjct: 268 DVSFVTSSRVDMVQESLLRDLRNAGMSTIYYGVESGCQRVLDMMKKGITVKQAEDAVRVT 327

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           + +   +    I   P +  ++ +  +  ++    D+     LT   GT  Y
Sbjct: 328 KKVGVDVITSFILGYPGEKPSEMDRTIDFSIKLDPDYSQYSILTPFPGTPIY 379


>gi|256844844|ref|ZP_05550302.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
           3_1_36A2]
 gi|294785875|ref|ZP_06751163.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_27]
 gi|256718403|gb|EEU31958.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
           3_1_36A2]
 gi|294487589|gb|EFG34951.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_27]
          Length = 435

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 24/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           D+  ++  +I KGT    M    +                Q +       ++E S+
Sbjct: 326 DNSYMFMYSIRKGTKAATMDNQIE--------EAVKKERLQRLMEVQNKCSFEESS 373


>gi|237741509|ref|ZP_04571990.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 4_1_13]
 gi|229429157|gb|EEO39369.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 4_1_13]
          Length = 435

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 24/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           D+  ++  +I KGT    M    +                Q +       ++E S+
Sbjct: 326 DNSYMFMYSIRKGTKAATMDNQIE--------EAVKKERLQRLMEVQNKCSFEESS 373


>gi|270308707|ref|YP_003330765.1| radical SAM/B12 binding domain protein [Dehalococcoides sp. VS]
 gi|270154599|gb|ACZ62437.1| radical SAM/B12 binding domain protein [Dehalococcoides sp. VS]
          Length = 494

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 22/254 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   +         +  ++  +++++    L     +  I F     +     
Sbjct: 193 CPFKCSFC--YNIPFHQGHRADLSVERIVSQIE---HLQKNYKVKFIRFFEDNFTF---- 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +           ++   E+  + +   +     KAG   + +GV++  ++ L +
Sbjct: 244 NRRRMREFCRTIIERRIKIKWDTESR-ADMSEEDVALMAKAGCTSVGIGVETGSKRMLEY 302

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  +  E                  ++ A+P +T   ++                 + 
Sbjct: 303 LNKGIDLDEMGHTFWRFVRHGIMPRLYIMLAVPSETPADFKETQDMLRKMEDPPFMYMRF 362

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAV----DLYNLTQSITSAHGLHAY--EISNHSFLGA 261
               GT  Y+   D   + P E++       +Y  T+   S          +S+ +   A
Sbjct: 363 VPYPGTPLYEELVDNKRIKPPESLEEWAKFSVYFATRGNLSELSDEQITQALSHWAHTYA 422

Query: 262 ES------LHNLNY 269
                    HN  Y
Sbjct: 423 SRRVMFTLRHNPRY 436


>gi|94970162|ref|YP_592210.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552212|gb|ABF42136.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 490

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 83/260 (31%), Gaps = 45/260 (17%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWM---------RQLTGPRSISSIF 75
           C + C +C    F    +  K      +   L E+  +           + G R  +   
Sbjct: 179 CPQHCDFCYKDAFY---QGGKTFYTQRVDEALAEISRLPGRHVYFLDDHMLGDRRFAEGL 235

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F G              + G+ + +  ++ V+  +  N         +   +AG+  I +
Sbjct: 236 FDG--------------MKGMRRLFQGAATVDSILRGN-------LIERAAEAGLRSIFV 274

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G ++L   +L+   +  N      A+     ++   ++   ++ +       +   +  A
Sbjct: 275 GFETLAPANLKQCNKRQNLGRDYKAVTDRLHSLGIMINGSFVFGMDDDGPDVFRRTVDWA 334

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH--------KDGDLVLPSENVAVDLYNLTQSITSAH 246
           + + V   + +  T   GT  +           +D +L      V        + + + +
Sbjct: 335 VEHGVTTATFHIQTPYPGTGLHARMEREGRMTTRDWNLYDTRHVVYRPARLTAEQLKTGY 394

Query: 247 GLHAYEISNHSFLGAESLHN 266
                E    S +   SLH+
Sbjct: 395 DWAYEEFYTWSNIAKASLHH 414


>gi|87082840|gb|ABD18892.1| Mg-protoporphyrin IX monomethyl ester cyclase [Caloramator
           fervidus]
          Length = 295

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 117 VEVNNFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSF 173
            +       ++   G+ +  +GVQ+   + L+ + R  N       +  +          
Sbjct: 3   FDDECLDVLKRAPYGLFQFEIGVQTTNLEVLKNINRVMNFKRVKENVRKILDEGNIHCHL 62

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           DLI  LP + +  ++   +  +S   D L +  L + KG+   K
Sbjct: 63  DLIVGLPGEDLDSFKKSFEDVMSIRPDVLQIGFLKVLKGSDMSK 106


>gi|89069602|ref|ZP_01156941.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
           HTCC2516]
 gi|89044800|gb|EAR50900.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
           HTCC2516]
          Length = 437

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 70/245 (28%), Gaps = 24/245 (9%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C          S      V +    +++ + E+  + Q             G 
Sbjct: 161 CDKFCAFCVVPYTRGAEVSRPAERVVDEARALVEAGVREITLLGQNVNAYHGHEGGLAGL 220

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             +L     +  I      +     +  I    +   +               + L VQS
Sbjct: 221 VRTLAAIDGLERI-RYTTSHPNDMDDALIAAHGDCPELMP------------YLHLPVQS 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H A   +  I   R+  P ++   D I   P +T   +   +    + 
Sbjct: 268 GSDRILKAMNRKHTAEAYLRLIERLRDARPDLALSGDFIVGFPGETEADFADTMGLVEAV 327

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN-H 256
                  ++ +   GT   +  +    V+      +      Q   +   +   E+    
Sbjct: 328 GYAQAYSFKYSTRPGTPAAEKPQLPGDVMSDRLARLQALLKAQQTAAQEAMVGREVGVLF 387

Query: 257 SFLGA 261
              G 
Sbjct: 388 EKPGR 392


>gi|315613452|ref|ZP_07888360.1| radical SAM protein [Streptococcus sanguinis ATCC 49296]
 gi|315314448|gb|EFU62492.1| radical SAM protein [Streptococcus sanguinis ATCC 49296]
          Length = 318

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 74/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +            + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAALSERMHVTVELGLQTTFEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 265


>gi|258516358|ref|YP_003192580.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780063|gb|ACV63957.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 435

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 71/201 (35%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +    ++ L E + +        + +    G     +  +
Sbjct: 154 CRNFCSYC---IIPYARGPLRSRQPEAVLNEAESLLAAGFKEIVLTGIQTGAYGVDLPAK 210

Query: 88  N-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
             +A I++ + +   +S     +IE  P+ +     +     K     + + +QS  ++ 
Sbjct: 211 TSLAAIVEKLLRISGLSRLRLSSIE--PNDLSPELIELILHSKIFCPHLHIPLQSGSDRV 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  R   P ++   D++   P +T   +E  L      A   +
Sbjct: 269 LKLMRRRYTTEGYAKILNNLREKMPNLAVTTDIMAGFPGETEEDFEQALGFIKDMAFSGM 328

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            +++ +  +GT      +  D
Sbjct: 329 HVFKYSPRRGTPAAGFPQQVD 349


>gi|217969294|ref|YP_002354528.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Thauera sp.
           MZ1T]
 gi|217506621|gb|ACK53632.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thauera sp. MZ1T]
          Length = 454

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 28/266 (10%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLT 66
           + M          +V     C K   YC F              ++  L E+     Q  
Sbjct: 136 DAMPPARVEGASAFVSIMEGCSK---YCTFCVVPYTRGDEVSRPLEDVLAEIAGLAAQGV 192

Query: 67  GPRSI--SSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSSVE 118
              ++   ++    G  S  + +        A +L+ +A+   +      T  ++P  + 
Sbjct: 193 KEVTLLGQNVNAWRGVLSREDGEQGADVGDFAFLLECVAEIPGIERIRYTT--SHPREMT 250

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--D 174
                 Y K    V+++ L VQS  ++ L  + R ++  E  + +   R   P +S   D
Sbjct: 251 QRLIDCYAKLPKLVSQLHLPVQSGSDRVLAAMKRGYSVLEFKSVVRKLRAARPDLSLTSD 310

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
            I   P +T   +E  ++       D    +  +   GT         DL  P       
Sbjct: 311 FIVGFPGETEEDFEKTMKLIDDVGFDGSFSFVYSSRPGTPAA------DLEDPVAQETKL 364

Query: 235 LYNLTQSITSAHGLHAYEISNHSFLG 260
            +    +         Y+ ++ + +G
Sbjct: 365 AWL---ARLQKRIDEQYQANSEAMVG 387


>gi|126734340|ref|ZP_01750087.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. CCS2]
 gi|126717206|gb|EBA14070.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. CCS2]
          Length = 423

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 153 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDTGYNEVVLTGVDLTSWGADLP 207

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  +     +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 208 ATPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSLQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AIA    AR + P M    D+I   P +T   +   L     
Sbjct: 263 HGDDMILKRMKRRHLRDDAIAFCQEARTLRPDMTYGADIIAGFPTETDDMFANSLALVKE 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             +  L ++  +   GT   KM  
Sbjct: 323 CDLTWLHVFPYSPRPGTPAAKMPP 346


>gi|31789378|gb|AAP58495.1| conserved hypothetical protein [uncultured Acidobacteria bacterium]
          Length = 414

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 59/195 (30%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR----QLTGPRSISSIFFGGGTPSL 83
           C + C YC           G+   I   + E++ +     +      +    FG    S 
Sbjct: 137 CEEACAYC---IIPTTRGAGRSVAIGDVVREVERIAASGFKEIALTGVHLGSFGRDLESR 193

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQSL 140
               ++   LDG A     +  V       P             +G        L +Q  
Sbjct: 194 RSLIDLLRALDGCA-----ADVVFRISSLEPMDCTKAIVDLVASSGGRFAPHFHLPLQHA 248

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +   E    +    AR     +  DLI   P ++   +   L    +  
Sbjct: 249 SNRMLALMRRPYTLGEYRGLVDGLAARLPHASIGSDLIVGFPGESDDDFRANLDYLPASP 308

Query: 199 VDHLSLYQLTIEKGT 213
           + HL ++  +   GT
Sbjct: 309 LTHLHVFPYSDRPGT 323


>gi|30250262|ref|NP_842332.1| Fe-S oxidoreductase family protein [Nitrosomonas europaea ATCC
           19718]
 gi|75540036|sp|Q82SI7|MIAB_NITEU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|30181057|emb|CAD86247.1| Fe-S oxidoreductases family 1 [Nitrosomonas europaea ATCC 19718]
          Length = 443

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 16/201 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI------ 84
           C  YC F              +   LTE+  +  + G + ++ +  G    + +      
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVLTEVAGLA-IQGVKEVTLL--GQNVNAYLGKMING 213

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + A +LD I +   +      T  ++P        + Y++    V  + L VQS  +
Sbjct: 214 EIADFATLLDYIHEIPGIERIRYTT--SHPREFTARLIEAYQRLPKLVGHVHLPVQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R +   E  + +   R + P +S   D I   P +T   +E  ++       D
Sbjct: 272 RILAAMKRGYTTVEYKSIVRKLRLVRPDISISSDFIIGFPGETEDDFEATMKLIDDVHFD 331

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
               +  +   GT    +  +
Sbjct: 332 ESFSFIYSPRPGTPAADLPDN 352


>gi|150390422|ref|YP_001320471.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
           QYMF]
 gi|238065283|sp|A6TRJ4|RIMO_ALKMQ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|149950284|gb|ABR48812.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
           QYMF]
          Length = 446

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/226 (11%), Positives = 69/226 (30%), Gaps = 19/226 (8%)

Query: 20  GVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+     C   C YC     + + +     +    +  +    Q      +  I    
Sbjct: 146 SAYIKISDGCDNYCTYC----IIPKLRGK---YRSRKMENIIQEAQTLANNGVKEIILIA 198

Query: 79  GTPS-----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
              +     L +   ++ +LD +++   +       +   P  +        +       
Sbjct: 199 QDTTRYGIDLYDEYRLSALLDKLSEVEGIQWIR--ILYCYPEMITDELIATIKNNDKVCK 256

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            I + +Q    + L+ + R  +  E ++ I   +   P +     +I   P ++   +  
Sbjct: 257 YIDIPIQHCSTKILKLMNRRTSKEEIVSLIEKLKKNVPNIVIRTSIIVGFPGESEEDFNE 316

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
                     D L ++  + E+GT   ++ +     L      + +
Sbjct: 317 LKAFIEDIKFDRLGVFTYSQEEGTPAAQLAEQVPSELKESRQKILM 362


>gi|326386874|ref|ZP_08208489.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208677|gb|EGD59479.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 474

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 75/215 (34%), Gaps = 10/215 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V      +   I   + E++++++      +  +FF   T +     
Sbjct: 207 CKSRCTFCLWPQTVG-GHNYRTRSIPHVIEEVKYVQREFP--QVKELFFDDDTLT----D 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N+  + +   +   +        +AN   V     +  ++ G   + +G +S  +Q L  
Sbjct: 260 NLPRVEELARELGKLGITWSCNAKAN---VPYETLKIMKENGCRLLLVGYESGNQQILHN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +   +    I  LP +T+   E  ++ A+      + +   
Sbjct: 317 IKKGLRIEVAKRFTRDCHALGIAIHGTFILGLPGETLETIEESIRYAIEINPHTIQVSLA 376

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               GT  Y+   +      ++++  D  N    +
Sbjct: 377 APYPGTFLYQQAMENGWFDGTDHLVADYGNQIAQL 411


>gi|282858916|ref|ZP_06268056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bivia
           JCVIHMP010]
 gi|282588298|gb|EFB93463.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bivia
           JCVIHMP010]
          Length = 442

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   ++S L E+Q ++   G R ++    ++   G  P+ 
Sbjct: 155 CNNFCHYC---IVPFTRGRERSRDVESILQEVQDLKGR-GFREVTLLGQNVNSYGLLPNG 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + + K      N+ +     NP  +  +  Q         + I    QS 
Sbjct: 211 KRPENGTSFAELLRKVAQSVPNMRVRFTTSNPEDMTEDILQAIADEPNLCHHIHFPAQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +   E +  +   R I P      D+      +++   +  L       
Sbjct: 271 SNSVLKDMNRKYTREEYLDKVAAIRRIIPDCGLTTDIFVGYHNESLEDHQQTLDLMREVG 330

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   K
Sbjct: 331 FDSAFMFKYSERPGTYAAK 349


>gi|217077858|ref|YP_002335576.1| biotin synthase [Thermosipho africanus TCF52B]
 gi|217037713|gb|ACJ76235.1| biotin synthase [Thermosipho africanus TCF52B]
          Length = 341

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 18/192 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +++RY++  +  I           +L   R I ++    G  + 
Sbjct: 58  YCRMDCLYCGLRAPNKNIKRYRMKIDEIID--------RAKLIAERGIKTVVLQSGEDTY 109

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + ++ ++  I K      +V IT+       +   ++ +++AG +R  +  ++ +E 
Sbjct: 110 YTKEIMSNLIKEIKKF-----DVAITLSIGEREFDE--YKAWKEAGADRYLMRHETADEA 162

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L  +         +   + +   +    +  LP Q   +   +L        D + 
Sbjct: 163 LYNKLHPSDTFENRKRHLFKLKELGYEVGAGCMVGLPGQGPIELAKDLIFLRDLDSDMIG 222

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 223 IGPFIPNPDTPL 234


>gi|123974893|ref|XP_001314053.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
 gi|121896076|gb|EAY01238.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
          Length = 391

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K+C YC  NS+   + + QE  + S      +  R L        +   G   S    
Sbjct: 77  CEKRCHYCGVNSY-EPFLIPQEAILNSCKFMWAKGYRNL--------VLQSGEITSRQRM 127

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             IA +LD I K +    +  + I  +   ++  +++ +   GV R  L ++S   +   
Sbjct: 128 DWIASLLDKIFKKYGKDKDTGMCIILSIGELDYADYKRFYDMGVQRFLLRIESSNPKLYA 187

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +    H+ +  +  +   + I        +  +P QT      +++         + + 
Sbjct: 188 TMHPADHSWARRVECLQNLKKIGYVTGNGCLIGVPHQTFDDLAGDIEFFRDGHYPMIGMG 247

Query: 206 QLTIEKGTLFYKMH 219
              I   T   +  
Sbjct: 248 PYLIHNDTKMGREI 261


>gi|50955210|ref|YP_062498.1| hypothetical protein Lxx15990 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|81390772|sp|Q6AE03|MIAB_LEIXX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|50951692|gb|AAT89393.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 535

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 81/227 (35%), Gaps = 17/227 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  +S   +V     C   C +C     V   +  +++  +     +
Sbjct: 148 LEALETFPSTLPTKRDSSFSGWVSISVGCNNTCTFC----IVPALRGKEKD--RRPGDIL 201

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L    ++     G    S       +   + +L    +   +          +P+
Sbjct: 202 AEVQALVDEGAVEVTLLGQNVNSYGVEFGDRQAFSKLLRAAGQIEGLERIRF--TSPHPA 259

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRM 171
           +   +      +    + ++ + +QS  ++ LR + R++ + + +  +    A+     +
Sbjct: 260 AFTEDVIDAMAETPNVMPQLHMPLQSGSDRILRSMRRSYRSEKFLGILDRVRAKLPGAAI 319

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           S D+I   P +T   +   L+   +        +Q +I  GT    M
Sbjct: 320 STDIIVGFPGETEEDFLDTLRVVEAARFASAFTFQYSIRPGTPAATM 366


>gi|146297144|ref|YP_001180915.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|238065313|sp|A4XLD9|RIMO_CALS8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|145410720|gb|ABP67724.1| SSU ribosomal protein S12P methylthiotransferase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 440

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 70/205 (34%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + + N+   ++ ++    +         I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGNYTSRYIDDIIQEARKLSEDGYKEIVLTAQDTTKYGID 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           + + + +A +L  +++   +     +   + P  ++       +     V    + +Q +
Sbjct: 209 IYQKKMLATLLQKLSEIDNIKWIRFLY--SYPEDIDDELLNIVKSLPKVVKYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R  ++      I   R+ F  +     ++   P ++  ++E   +      
Sbjct: 267 NNRILKLMNRKTSSEGIKELIQRIRSAFDEVVIRTTVMVGFPTESEDEFEELYEFVKWAK 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L  +  + E+GT    + +  D
Sbjct: 327 FDRLGAFMYSQEEGTPAADLPQTDD 351


>gi|283956827|ref|ZP_06374301.1| MiaB-like tRNA modifying enzyme YliG [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283791688|gb|EFC30483.1| MiaB-like tRNA modifying enzyme YliG [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 439

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  + N I      +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSREINSI------IAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 SEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|254485983|ref|ZP_05099188.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. GAI101]
 gi|214042852|gb|EEB83490.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. GAI101]
          Length = 462

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 80/235 (34%), Gaps = 25/235 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C       R         +      + + +  G R ++ +      + G  P 
Sbjct: 181 CDKFCAFC--VVPYTRGAEVSRPATRVLAEACELVER--GVREVTLLGQNVNAYHGVGPE 236

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +A ++  IAK   +      T  ++P+ ++      + +    +  + L VQS 
Sbjct: 237 G-ADYTLARLIREIAKIDGLERIRYTT--SHPNDMDDALIAAHGEVDKLMPYLHLPVQSG 293

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H A   +  I   R+  P +    D I   P++T   +E  +       
Sbjct: 294 SDRILKRMNRSHTAESYLRLIERIRDARPDIVMSGDFIVGFPEETDADFEATMDLVREVK 353

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             +   ++ +   GT   +              A    +  Q + +    H  EI
Sbjct: 354 YGYAYSFKYSTRPGTPAAERALVD---------AAVADDRLQRLQALITGHQREI 399


>gi|157129375|ref|XP_001661661.1| radical sam proteins [Aedes aegypti]
 gi|108872257|gb|EAT36482.1| radical sam proteins [Aedes aegypti]
          Length = 558

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 37/242 (15%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------- 74
            P    C+  C YC       + K  + + +   + E+           +  I       
Sbjct: 210 IPINSGCLNACTYC-------KTKFARADLVSYPVEEIVQRAAHVFTEGVCEIWLTSEDT 262

Query: 75  -FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--- 130
             +G    + + P+ +  ++        +     + +        + + +   K  V   
Sbjct: 263 GTYGRDIGTSL-PELLWQLVAV------IPDGCMLRLGMTNPPYILEHLEEMAKILVHPK 315

Query: 131 --NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
             + + + +QS  +  L  + R +  S+    +    +  P ++   D+I   P +T   
Sbjct: 316 VYSFLHVPIQSGSDSVLSDMKREYCRSDFEQIVDFLNDKVPGITIATDIICGFPTETEED 375

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +E  +     Y    L + Q     GT   KM +     +P++ V V    LT    +  
Sbjct: 376 FEHTMTLCEKYKFPSLFINQFYPRPGTPAAKMQR-----IPADQVKVRTKRLTDLFYTYE 430

Query: 247 GL 248
             
Sbjct: 431 PY 432


>gi|83854736|ref|ZP_00948266.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp.
           NAS-14.1]
 gi|83842579|gb|EAP81746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp.
           NAS-14.1]
          Length = 439

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 80/236 (33%), Gaps = 23/236 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  LTE + + +  G R ++    ++    G    
Sbjct: 158 CDK---FCAFCVVPYTRGAEVSRPATRVLTEARELVER-GVREVTLLGQNVNAYHGVGEE 213

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +A ++  +AK   +      T  ++P+ ++      + +    +  + L VQS  
Sbjct: 214 GADYTLARLIKELAKIDGLERIRYTT--SHPNDMDDALIAAHGEIDKLMPYLHLPVQSGS 271

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R+H A   +  I   R   P +    D I   P++T T +E  ++       
Sbjct: 272 DRILKRMNRSHTAESYLRLIERIRAARPDIVMSGDFIVGFPEETHTDFEATMELVREVKY 331

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +   ++ +   GT   +  +           A       Q +         EI N
Sbjct: 332 GYAYSFKYSTRPGTPAAERPQV---------EAAIADERLQRLQGLITGQQREIQN 378


>gi|323483386|ref|ZP_08088774.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163]
 gi|323691115|ref|ZP_08105395.1| radical SAM domain-containing protein [Clostridium symbiosum
           WAL-14673]
 gi|323403240|gb|EGA95550.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163]
 gi|323504812|gb|EGB20594.1| radical SAM domain-containing protein [Clostridium symbiosum
           WAL-14673]
          Length = 291

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 73/215 (33%), Gaps = 9/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C+     +      E  +                  +  +F   G   +++ 
Sbjct: 25  CAHNTCTFCNMYKDKQFRVRKMEEIMADLQEAHDAYAAY-----VQKVFLADGDALIMKT 79

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +++  IL  + + +  V+         +         +  ++AG+  + +G ++ +++ L
Sbjct: 80  EDLLTILAAVKELFPRVTRVAAYGTAQDILRKSEEELRLLKEAGLGIVYVGAETGDDEIL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLS 203
            ++ +   A E IAA    +      S  LI  L  +           +       ++ S
Sbjct: 140 EYIHKGVTAGEVIAAGQKLKRCGIATSVTLISGLGGRKKVKEHALSCAKLITEMNPEYAS 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              L + +GT  Y+   +G     + +  +D   +
Sbjct: 200 FLTLRLYEGTPMYEDVVEGRFERITADEIMDEMKI 234


>gi|322375524|ref|ZP_08050037.1| radical SAM protein, family [Streptococcus sp. C300]
 gi|321279787|gb|EFX56827.1| radical SAM protein, family [Streptococcus sp. C300]
          Length = 315

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVKKYLVYFQNFTNT---HEKVEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 99  IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTFEATSDLI 158

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 159 NRAHSYELYVETVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLHL 218

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 219 LHLMTNTRMQRDYHEGRLQLMSQDEYVKVICDQLEIIPKHIVIH 262


>gi|315505289|ref|YP_004084176.1| radical sam domain protein [Micromonospora sp. L5]
 gi|315411908|gb|ADU10025.1| Radical SAM domain protein [Micromonospora sp. L5]
          Length = 644

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 14/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC +C        +       +++F    ++   +L     + ++        ++  
Sbjct: 220 CPYKCSFC-------YWGGAVGQRVRAFSRERLRAELELFARCGVHTVVACDANFGMLPI 272

Query: 87  --QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQ 143
             + +  ++D   ++       E +   N S V     +  ++AG+    +L +QSL   
Sbjct: 273 DLELVDDLIDIKRRH-GFPLAFESSWAKNKSKVFYEIVRRMKEAGLRSSFTLALQSLNPD 331

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + R     ++    +            +LI+  P  T+  +         + V  +
Sbjct: 332 ALTLMRRRNMKVNDWRDLVRWLNREGLDCYAELIWGAPGDTVESFLAGYDELAQH-VSRI 390

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++Y + +   T + +  +   +V    +     Y L     +  
Sbjct: 391 AVYPIMLLPNTEYAENKELYGIVALRGDNDDFEYVLAHRTMTFA 434


>gi|290976728|ref|XP_002671091.1| [Fe] hydrogenase maturation protein [Naegleria gruberi]
 gi|284084657|gb|EFC38347.1| [Fe] hydrogenase maturation protein [Naegleria gruberi]
          Length = 524

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 70/232 (30%), Gaps = 8/232 (3%)

Query: 28  CVKKCPYCDFNSH--VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C K C YC    H  V RY + +E  I+     +       G   + S          + 
Sbjct: 200 CQKDCNYCGIRKHMQVPRYTMPKEEIIE---QAIWAYENHFGSIMLQSGELNTEGRISML 256

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              I  I            N  + I      +   ++Q    AG +R  L +++   +  
Sbjct: 257 VDVIREIKKRTGGGGPGEWNKGLGIALGVGELSRESYQRLYDAGAHRYLLRIETSNPELY 316

Query: 146 RFLGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             L  N   H   E    +    +I  +    ++  +P QT+     +L        D +
Sbjct: 317 SKLHPNDENHVWEERKKCLETLMDIGYQTGTGVMIMIPNQTVQDLADDLLFFRKIGADMI 376

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +    +++GT   K+  +    +           L +       L    I 
Sbjct: 377 GMGPYIVQEGTPIGKIWMEQYGHMNEAEKKEYNRVLFRLALKMTALARILIP 428


>gi|227486151|ref|ZP_03916467.1| radical SAM protein, family protein [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235782|gb|EEI85797.1| radical SAM protein, family protein [Anaerococcus lactolyticus ATCC
           51172]
          Length = 310

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 56/160 (35%), Gaps = 5/160 (3%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQS 144
            +A +     +  +    + + I      +         +        + LG+QS+ +++
Sbjct: 99  EVARLRKIYYEALSADDVIGLAIATRADCLSDEVLGLLEEINEKYFLVVELGMQSVNDRT 158

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R ++       +   +    ++   +I  LP +    +  ++       V  + +
Sbjct: 159 LKLINRGYDHETFNLGLRKLKARGIKVLVHMIVGLPYENFDDYMKDIAYINEAFVWGIKI 218

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           + L IEK + F K ++  +  L       +   +   I  
Sbjct: 219 HNLYIEKASRFEKFYQ--EKGLAYSMDMAEYVKIVVEILR 256


>gi|168179706|ref|ZP_02614370.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
 gi|182669361|gb|EDT81337.1| radical SAM domain protein [Clostridium botulinum NCTC 2916]
          Length = 289

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 92/235 (39%), Gaps = 17/235 (7%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C     + + +  +   ++    +++  +     R I+ IF   G    ++ + 
Sbjct: 27  HNKCSFCS----MYKNEKFRVRELKEIFEDLEESKSYY--RRINRIFLADGDALCLKTET 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL  I +       V I   A +     +   +  R+ G+  + +G++S   + L  
Sbjct: 81  LKKILLKIKETHPQCERVGIYATAKDVLRKSIEELKELRELGLGIVYMGLESGSPEILED 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSY-AVDHLS 203
           + +     E I A   AR    + S  +I  L      +W+    E  +ALS    D++ 
Sbjct: 141 INKGVKVEEYIEASKKARVSGIKSSITVISGLGG--KEKWQQHAIETGKALSLIDPDYVG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS-AHGLHAYEISNHS 257
           L  L +++GT   +  K G++ L        +   T+ +    +  +    SNH+
Sbjct: 199 LLTLLLDEGTEMTEQVKRGEITLLKPEE---VMEETKLMLENMNVTNCIFRSNHA 250


>gi|149204848|ref|ZP_01881810.1| MiaB-like tRNA modifying enzyme [Roseovarius sp. TM1035]
 gi|149141718|gb|EDM29773.1| MiaB-like tRNA modifying enzyme [Roseovarius sp. TM1035]
          Length = 419

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  ++ +++L G      +  G    S    +
Sbjct: 148 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIKRLVGAGYNEVVLTGVDLTSWGADL 201

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 202 PAAPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSL 256

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+   
Sbjct: 257 QHGDDLILKRMKRRHLRDDAIRFAEEARRLRPEMTFGADIIAGFPTETEAAFENSLRLVE 316

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              +  L ++  +   GT   +M +
Sbjct: 317 ECHLTWLHVFPYSPRPGTPAARMPQ 341


>gi|153809517|ref|ZP_01962185.1| hypothetical protein BACCAC_03835 [Bacteroides caccae ATCC 43185]
 gi|149127825|gb|EDM19048.1| hypothetical protein BACCAC_03835 [Bacteroides caccae ATCC 43185]
          Length = 348

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 62/191 (32%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +  S  + +   +Q       + +  GG  P  +   
Sbjct: 62  CRNNCYYCG----IRKGNPHVARYRLSPESILDCCKQGYALGFRTFVLQGGEDP-ALTDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  I+  I +++      +  I  +        ++ +  AG NR  L  ++ +      
Sbjct: 117 RIETIVATIRRHYP-----DCAITLSLGEKSREAYERFFHAGANRYLLRHETYDATHYSQ 171

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +  + +  +   +    +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPAGMSGKQRLQCLQNLKETGYQTGTGIMVGSPGQTVEHLIQDILFIEKLRPEMIGIGP 231

Query: 207 LTIEKGTLFYK 217
               + T F +
Sbjct: 232 FLPHQDTPFAR 242


>gi|255657963|ref|ZP_05403372.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mitsuokella multacida DSM
           20544]
 gi|260850164|gb|EEX70171.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mitsuokella multacida DSM
           20544]
          Length = 444

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 69/222 (31%), Gaps = 14/222 (6%)

Query: 9   NNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLT 66
           +++    + SL  +V   + C   C YC     +  Y  G+E        ++   + +  
Sbjct: 143 DDVPVARAGSLSAWVPIMYGCNNFCTYC-----IVPYVRGRER--SRLPEDIVHEVEEAV 195

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGY 125
                     G    S  +   +A   D +     V     +  + ++P  +        
Sbjct: 196 KNGYEEVTLLGQNVNSYGKDHKLADFADLLKMVDKVPGIRRVRFMTSHPKDLSDKVIAAI 255

Query: 126 R--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
           R  +     I L VQ    + L+ + R +        +   R   P +S   DLI   P 
Sbjct: 256 RDGEHLCEHIHLPVQYGSNRILKAMNRVYTVESYRDLVRRIRAAIPDVSLTTDLIVGFPG 315

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +T   ++  L        D    +  +   GT    M    D
Sbjct: 316 ETDEDFQQMLDFLREIRYDSAYTFIYSKRSGTPAATMENQVD 357


>gi|254452609|ref|ZP_05066046.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Octadecabacter
           antarcticus 238]
 gi|198267015|gb|EDY91285.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Octadecabacter
           antarcticus 238]
          Length = 443

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 23/201 (11%)

Query: 28  CVKKCPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C         F+    R        +++ + E+  + Q        +    G 
Sbjct: 167 CDKFCAFCVVPYTRGAEFSRPADRIIREAHELVEAGVREITLLGQNVNAYHGHAGGLAGL 226

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
              L +   +  I      +     +  I        +               + L VQS
Sbjct: 227 IWDLDKVDGLKRI-RFTTSHPNDMDDALIDAHGTCDKLMP------------YLHLPVQS 273

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H   +  A I   R   P   +S D I   P +T   +E  +    + 
Sbjct: 274 GSDKVLKAMNRKHTRDQYFALIERIRAARPDLLLSGDFIVGFPGETEADFEDTMDLVRTV 333

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
                  ++ +   GT   + 
Sbjct: 334 GYGQAYSFKYSTRPGTPAAER 354


>gi|157369463|ref|YP_001477452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Serratia proteamaculans
           568]
 gi|229890662|sp|A8GB34|MIAB_SERP5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157321227|gb|ABV40324.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Serratia proteamaculans
           568]
          Length = 474

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 67/227 (29%), Gaps = 16/227 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTP---S 82
           C K C +C       R +              Q   Q     ++   ++    G      
Sbjct: 157 CNKYCTFC--VVPYTRGEEVSRPSDDVLFEVAQLAAQGVREVNLLGQNVNAYRGATYDGG 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     +  ++  I     +         ++P     +    Y      V+ + L VQS 
Sbjct: 215 ICSFAELLRLVAAIDGIDRIRYTT-----SHPIEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  +       
Sbjct: 270 SDRILTMMKRAHTALEYKAIIRKLRKARPDIQLSSDFIIGFPGETQADFEQTMNLIAEIN 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            D    +  +   GT    M  D       + + +    + Q +   
Sbjct: 330 FDTSFSFIYSSRPGTPAADMVDDVSEDEKKQRLYILQDRINQQVLQF 376


>gi|70726341|ref|YP_253255.1| hypothetical protein SH1340 [Staphylococcus haemolyticus JCSC1435]
 gi|68447065|dbj|BAE04649.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 448

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 78/233 (33%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNAGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +        +++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLEEIDGLERIRISSIEAS--QLTDEVIDVLKRSNKVVRHLHVPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        I    +  P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMEHFSERIMKLHDALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 328 VFPYSARIGTPAARMDDQIDETIKNERVHKLITLSDQLAKEYASKFEDEVLEV 380


>gi|126643044|ref|YP_001086028.1| putative tRNA-i(6)A37 modification enzyme [Acinetobacter baumannii
           ATCC 17978]
 gi|126388928|gb|ABO13426.1| putative tRNA-i(6)A37 modification enzyme [Acinetobacter baumannii
           ATCC 17978]
          Length = 246

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P        Q Y      V+ + L VQS     L+ + RNH     I  I   R I
Sbjct: 35  TTSHPLEFSDELIQCYEDLPQMVSHLHLPVQSGSNDVLKAMKRNHTIDVYIDKIAKLRKI 94

Query: 168 FP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            P   +S D I   P +T   +   LQ       DH   +  +   GT 
Sbjct: 95  RPDMHLSSDFIIGFPGETDENFAKTLQFIKDLDFDHSYSFVYSKRPGTP 143


>gi|322434214|ref|YP_004216426.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321161941|gb|ADW67646.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 469

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 58/201 (28%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C  +    +    ++    +      M+         S               
Sbjct: 209 CPYRCRWCS-HQVYGQTHRRRDPIKVVDEVEWLMKEYTPDIAWVSDDVFTINH------- 260

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +         +   +    E    +    +         + G  RI +G +S  ++ L
Sbjct: 261 --DWIRKYSAEMRRRGLHIPFECI--SRADRLNEEMLDLLAELGCFRIWIGSESGSQRLL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R     +   A+ ++R    +    L++    + M   E  ++   +   D     
Sbjct: 317 DSMDRGVKVEQVQRAVQMSRERKIQSGMFLMWGYEGEEMEDIEATIRHVSTAQPDIFFTT 376

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
                KGT +Y+  +   + L
Sbjct: 377 VSYPIKGTPYYQQIQSKLVQL 397


>gi|291544385|emb|CBL17494.1| iron-only hydrogenase maturation protein HydE [Ruminococcus sp.
           18P13]
          Length = 346

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 60/195 (30%), Gaps = 11/195 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     E +  +    +   R+        +    GG  +    
Sbjct: 62  YCKNDCYYCG----LRRSNPKAERYRLTEEEILDCCRE-GYALGFRTFVLQGGEDAYFTR 116

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  I+    +      +  +T+          ++  +R+AG +R  L  ++ +    R
Sbjct: 117 ERMVHII---RQIKGAYPDCALTLSIGERC--RADYAAFRQAGADRYLLRHETADPAHYR 171

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +    I  +   + +  +     +   P QT      +L          + + 
Sbjct: 172 VLHPEPLSLEHRIKCLETLKELGFQTGCGFMVGSPGQTPETLAEDLLFIRRLQPQMVGIG 231

Query: 206 QLTIEKGTLFYKMHK 220
                  T F+   +
Sbjct: 232 PFIPHGDTPFHNKPQ 246


>gi|59711366|ref|YP_204142.1| isopentenyl-adenosine A37 tRNA methylthiolase [Vibrio fischeri
           ES114]
 gi|197335117|ref|YP_002155521.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio fischeri MJ11]
 gi|75354378|sp|Q5E6U2|MIAB_VIBF1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891024|sp|B5FBL3|MIAB_VIBFM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|59479467|gb|AAW85254.1| isopentenyl-adenosine A37 tRNA methylthiolase [Vibrio fischeri
           ES114]
 gi|197316607|gb|ACH66054.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio fischeri MJ11]
          Length = 474

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P  +
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGP--M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     +     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGDICTFAELLRMVASIDGIDRLRFTTSHPLEFGDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++       
Sbjct: 271 DRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDFQDTMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           D    +  +   GT       D    +P +     L  L Q + S    ++
Sbjct: 331 DMSFSFIFSARPGTPAA----DYPCDIPEQEKKDRLAELQQQVNSQAMRYS 377


>gi|15894308|ref|NP_347657.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|15023931|gb|AAK78997.1|AE007617_9 Predicted Fe-S oxidoreductases [Clostridium acetobutylicum ATCC
           824]
 gi|325508436|gb|ADZ20072.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
          Length = 548

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 69/230 (30%), Gaps = 36/230 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  +S +R  +    + ++  L  +         + +  + F   T +   P+
Sbjct: 187 CPFNCKYC-LSSTIRGVRFLNPDRVKRELKFLA-------DKKVKIVKFVDRTFNA-NPK 237

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
               I         + +      E     V  +  +  + A   R     GVQS   + L
Sbjct: 238 FAMEIWK---YLMELDTETVFHFEITADIVTEDEIELLKNAPKGRFQFEVGVQSTNNEVL 294

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R     +    +         ++   DLI  LP +    ++       S   + L 
Sbjct: 295 KNVNRYIEFKDIKEIVMKLEE-GKNINQHLDLIVGLPGEDFNSFKNSFNDVYSIGPEKLQ 353

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +  L + KG+   +  +                       S    H YEI
Sbjct: 354 IGFLKLLKGSSMREEAEKWG-------------------MSYSPYHPYEI 384


>gi|291526956|emb|CBK92542.1| iron-only hydrogenase maturation protein HydE [Eubacterium rectale
           M104/1]
          Length = 352

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 23/198 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+H  RY++     +    +  +      G R+   +  GG  P  
Sbjct: 67  YCKNDCLYCGIRHSNTHADRYRLSTGQIMACCESGYEL-----GFRTF--VLQGGEDP-Y 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + I  I+ GI   +      +  +  +       ++Q Y  AG +R  L  ++ +E 
Sbjct: 119 YTDERICEIVSGIKAKYP-----DCAVTLSIGEKSKESYQSYFDAGADRYLLRHETADE- 172

Query: 144 SLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +   R H A  ++A     +   + I  ++    +   P QT+     +LQ       
Sbjct: 173 --KHYNRLHPAEMSLANRKQCLWDLKEIGYQVGCGFMVGSPGQTVETLYEDLQFIKELEP 230

Query: 200 DHLSLYQLTIEKGTLFYK 217
             + +     +K T F  
Sbjct: 231 HMVGIGPFISQKDTPFAN 248


>gi|242310194|ref|ZP_04809349.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523491|gb|EEQ63357.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 443

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC +C   S   +         ++  + ++ ++ L         F    + S +   
Sbjct: 152 CNQKCSFCAIPSFKGKLHS------RTLESTLKEVQNLAQKGFSDFTFISQDSSSYLRDL 205

Query: 88  NIAL-ILDGIAKNWTVSSNVEITIEAN-----PSSVEVNNFQGYRKAGV--NRISLGVQS 139
            I   ++D +     ++        A      P++      Q    + +  N   + +Q 
Sbjct: 206 GIKDGLVDLVKGIDKLAKEGIGIKSARILYLYPATTSKKLIQTIIDSPIFHNYFDMPLQH 265

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + ++ L+ +GR     E +  +  A N F R S   I   P +  + +    +    +  
Sbjct: 266 ISQKVLKQMGRGGEFKELLEMMRQAPNSFVRTS--FIIGHPGEEESDFVELCEFVEKFHF 323

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D ++ +  + E+GT   KM
Sbjct: 324 DRINFFAYSKEEGTKSAKM 342


>gi|114331766|ref|YP_747988.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosomonas eutropha
           C91]
 gi|122313484|sp|Q0AF59|MIAB_NITEC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|114308780|gb|ABI60023.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosomonas eutropha
           C91]
          Length = 443

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 76/225 (33%), Gaps = 14/225 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSI--SSIFFGGGTPSLIEPQ 87
           C  YC F              +   LTE+   + Q     ++   ++       S     
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVLTEVAGLVIQGVKEVTLLGQNVNAYYDKTSGEGDI 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A +LD I +   +      T  ++P        + Y++    V  + L +QS  ++ L
Sbjct: 217 DFATLLDYIHEIPGLVRIRYTT--SHPREFTARLIETYQRLPKLVGHVHLPIQSGSDRIL 274

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R +   E  + I   R I P +S   D I   P +T T +E  ++       D   
Sbjct: 275 AAMKRGYTIIEYKSIIRKLRTIRPNISISSDFIVGFPGETDTDFEETMKLIDDVKFDESF 334

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
            +  +   GT    +  D     P       L+ L + I     +
Sbjct: 335 SFIYSPRPGTPASDLPDDT----PYRIKLARLHQLQEKIQRNAQM 375


>gi|94309398|ref|YP_582608.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cupriavidus metallidurans
           CH34]
 gi|123384028|sp|Q1LR87|MIAB_RALME RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|93353250|gb|ABF07339.1| isopentenyl-adenosine A37 tRNA methylthiolase [Cupriavidus
           metallidurans CH34]
          Length = 450

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC       R +     F            Q  G R ++ +      + G    
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQ--GVREVTLLGQNVNAYRGAMGG 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+++ +A    +      T  ++P        + Y +    VN + L VQ  
Sbjct: 212 TSEIADFALLIEYVADIPGIERIRYTT--SHPKEFTSRLIELYGRCDKLVNHLHLPVQHA 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R ++  E  + I   R + P MS   D I   P +T   ++  +       
Sbjct: 270 SDRVLAGMKRGYSVLEYKSIIRRLRALRPDMSMSSDFIVGFPGETDADFDKLMAMVHEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    +H
Sbjct: 330 YDTSFSFIFSPRPGTPAANLH 350


>gi|284049176|ref|YP_003399515.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283953397|gb|ADB48200.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 369

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 72/210 (34%), Gaps = 11/210 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F  +   ++  M +        S+    G     + +
Sbjct: 60  CIKDCLYCG----IRRDNEEVERF-DTAREDILSMARWALDNQYGSLTLQSGE---RQDE 111

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                ++G+ ++    S+ ++ +           ++ + +AG +R  L +++        
Sbjct: 112 EFITFVEGLIRDIKKLSDGKLGLTLCLGEQTEETYRRWLEAGAHRYLLRIETSNPALYAT 171

Query: 148 LG-R--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  R  +H  +     + + R +  ++   ++  LP QT+     ++       +D + +
Sbjct: 172 LHPRDGHHEWTVRKHCLEILRKLGYQVGTGVMIGLPGQTLEDLADDILFYRDMDIDMIGM 231

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
               +   T   K         P       
Sbjct: 232 GPYVVHHNTPLGKQVVAEGGNTPEAQQHRF 261


>gi|134296886|ref|YP_001120621.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           vietnamiensis G4]
 gi|229890494|sp|A4JHN3|MIAB_BURVG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|134140043|gb|ABO55786.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           vietnamiensis G4]
          Length = 457

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  S 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALSA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSADIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|317404691|gb|EFV85083.1| hypothetical protein HMPREF0005_04066 [Achromobacter xylosoxidans
           C54]
          Length = 477

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    +       Q     ++   +   + G      E 
Sbjct: 183 CSKYCSFCVVPYTRGEEVSRPFDDVLVEVADLADQGVKEVTLLGQNVNAYRGRMSDSGEI 242

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A++L+ + +   +      T  ++P  +       Y +    V+ + L VQ+  ++ 
Sbjct: 243 ADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRV 300

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E  + +   R   P ++   D I   P +T   +E  ++       D  
Sbjct: 301 LAAMKRGYTTLEFKSVVRRLRAARPDLTLSSDFIVGFPGETEEDFEKTMKLIEDVGFDTS 360

Query: 203 SLYQLTIEKGTLFYKMH 219
             +  +   GT    +H
Sbjct: 361 FSFVYSRRPGTPAADLH 377


>gi|170755938|ref|YP_001781349.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum B1
           str. Okra]
 gi|229890487|sp|B1IM69|MIAB_CLOBK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169121150|gb|ACA44986.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum B1
           str. Okra]
          Length = 450

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 16/198 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   ++       +++L           G    S    +
Sbjct: 169 CNNFCTYC-----IVPYVRGRERS-RTPENIEDEIKKLISEGYKEITLLGQNVNSYGKDL 222

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           EP+   A +L+ +     +       + ++P  +  +  +   K      +I L VQS  
Sbjct: 223 EPKVTFAELLERVNTIDGLERVRF--MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSGS 280

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +  +   + + P +  S D+I   P +T   +E  L        
Sbjct: 281 SEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDFEETLSLVKEVEY 340

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D    +  +I KGT   K
Sbjct: 341 DSAFTFLYSIRKGTPAAK 358


>gi|150002945|ref|YP_001297689.1| biotin synthase [Bacteroides vulgatus ATCC 8482]
 gi|254884685|ref|ZP_05257395.1| biotin synthase [Bacteroides sp. 4_3_47FAA]
 gi|294776605|ref|ZP_06742074.1| radical SAM domain protein [Bacteroides vulgatus PC510]
 gi|319642354|ref|ZP_07997009.1| biotin synthase [Bacteroides sp. 3_1_40A]
 gi|149931369|gb|ABR38067.1| biotin synthase [Bacteroides vulgatus ATCC 8482]
 gi|254837478|gb|EET17787.1| biotin synthase [Bacteroides sp. 4_3_47FAA]
 gi|294449520|gb|EFG18051.1| radical SAM domain protein [Bacteroides vulgatus PC510]
 gi|317386014|gb|EFV66938.1| biotin synthase [Bacteroides sp. 3_1_40A]
          Length = 344

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +     T ++  R+       + +  GG  P  +  +
Sbjct: 62  CRNNCHYCG----IRKGNTAITRYALKRETILECCREGYALGFRTFVMQGGEDP-ALTDE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +  I   +      +  I  +        ++ + +AG NR  L  ++  E+  R 
Sbjct: 117 WIEKTVAAIHCEFP-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETHNEEHYRK 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   + I  +    ++   P QT+T    +L     +    + +  
Sbjct: 172 LHPEEMSLKHRLQCLQWLKEIGYQTGTGIMVGTPGQTLTHLVEDLLFIEQFQPQMIGIGP 231

Query: 207 LTIEKGTLF 215
                 T F
Sbjct: 232 FIPHHDTPF 240


>gi|15920732|ref|NP_376401.1| hypothetical protein ST0515 [Sulfolobus tokodaii str. 7]
 gi|15621515|dbj|BAB65510.1| 418aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 418

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 3/108 (2%)

Query: 119 VNNFQGYRKAGV-NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DL 175
               +  +   V   + L VQS +++ L+ + R +   E    +   R+  P ++   D+
Sbjct: 228 DEILEIIKDKRVYKFLHLPVQSGDDRVLKLMNRKYTVDEYRELVKEIRDKIPIVNITTDI 287

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           I   P +    ++  +        + + L   +I   T    M +  D
Sbjct: 288 IIGHPGEDDEAFQNTINLIKEIKFERIHLAMYSIRPNTRSASMPQVPD 335


>gi|194334232|ref|YP_002016092.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312050|gb|ACF46445.1| Radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 520

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 71/195 (36%), Gaps = 8/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C   C +C  N         +    Q  + E+  +R+     S+  +   F     S ++
Sbjct: 175 CPYHCDFC--NVTALFGHKIRTKTSQQIIDELDGLREAGWKGSVFFVDDNFIAHK-SYLK 231

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +  +++    N  V++        N +  +         AG N++ +G+++ ++ +L
Sbjct: 232 KELLPKLIEWRRSNS-VANRYYTECSINLAD-DSELMDLMVAAGFNQVFIGIETPDDLAL 289

Query: 146 RFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +  G+ H  +   +  +   ++    +    I      T + +  +++   +  +    +
Sbjct: 290 QACGKQHNTSRNLLDNVRRIQHAGLEVMGGFIVGFDSDTPSIFSKQIEFIQNSGIVTAMV 349

Query: 205 YQLTIEKGTLFYKMH 219
             L    GT  Y+  
Sbjct: 350 GLLQALPGTGLYERM 364


>gi|220905544|ref|YP_002480856.1| MiaB-like tRNA modifying protein YliG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869843|gb|ACL50178.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 442

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 86/281 (30%), Gaps = 39/281 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI----QSFL----TEMQWMRQLTGPRSISSIFFGGG 79
           C  KC +C   S           +I    ++ L     E+  + Q       + +    G
Sbjct: 157 CRHKCAFCTIPSIRGGLHSLPAEYIVDEARALLGQGVRELALVAQDLTAWG-ADLGMKNG 215

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
            PSL+  + +A +                 +   PS V        R  G   +  + + 
Sbjct: 216 LPSLL--EKLAALDGLAWLRL---------LYLYPSGVTPELLALIRDTGAPLLPYLDIP 264

Query: 137 VQSLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +Q      L  +GR    N    + A+         +    I   P +T  Q+E   +  
Sbjct: 265 LQHAHPDVLSRMGRPFAGNPRRVLDAVRQ-NLPHAALRTTFIVGYPGETDEQFESLCRFV 323

Query: 195 LSYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              A  H+ ++    E GT          D       + +     ++++ + +AH     
Sbjct: 324 EESAFQHVGVFAYQAEDGTEAATLPDQVPDAVKQWRRDTLMDIQADISERLLAAHVGSRM 383

Query: 252 EISNHS-FLGAESLHNLNYWRYGDYI---------GIGPGA 282
           ++   +       LH+   W     +         G+ PGA
Sbjct: 384 QVLVDAPHPEWPGLHSGRVWLQAPEVDGITYVSGPGVAPGA 424


>gi|114561896|ref|YP_749409.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella frigidimarina
           NCIMB 400]
 gi|122300718|sp|Q087J4|MIAB_SHEFN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|114333189|gb|ABI70571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shewanella frigidimarina
           NCIMB 400]
          Length = 474

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 70/224 (31%), Gaps = 14/224 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSLIEP 86
           C  YC F              +   + E+  +    G R +     ++    G       
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPLDDVILEVAQLAAQ-GVREVNLLGQNVNAYRGAT---HD 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             I    + +    ++     +     +P     +    Y      V+ + L VQS  ++
Sbjct: 213 DEICTFAELLRLVASIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P ++   +   ++     A DH
Sbjct: 273 ILTQMKRGHMAIEYKSIIRRLRKARPDIQISSDFIIGFPGESKDDFADTMKLIEDVAFDH 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
              +  +   GT    +  D       + +A+    +TQ     
Sbjct: 333 SFSFIYSARPGTPAADLPDDVSDEEKKQRLAILQDRITQQAMRY 376


>gi|312876586|ref|ZP_07736568.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796661|gb|EFR13008.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 351

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+  +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNNQAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+        + S+V++ I  +      + ++ ++ AG +R  +  ++   Q
Sbjct: 114 YNKDMLCSIIK------KIKSSVDVAITLSIGERSYDEYKAFKDAGADRFLMRFETSNRQ 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
                    +    I  +   +++   +    +  LP QT+     ++        D + 
Sbjct: 168 LYEKYHPGMSFENRIECLKWIKSLGYELGTGFLIGLPGQTIDDLAQDILLVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|303243020|ref|ZP_07329473.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
 gi|302589439|gb|EFL59234.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
          Length = 436

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 74/233 (31%), Gaps = 21/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    +           I   + +++++++L   + +          +++  +
Sbjct: 167 CPNSCSFCS--VYCLYKNHYMRREISEVIRDIKYIKKLGYKKFLLLDD------NILSDR 218

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGVNRISLGVQSLEEQSLR 146
              L L    +   ++   +  I       +     +   K+G   +S G++S+ ++SL 
Sbjct: 219 EYLLKLCAEIEKLNMTWLSQCQISI----ADDEKVLKAVAKSGCISLSFGIESISQESLN 274

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + ++    S     +   +     +S +++      T+              +     Y
Sbjct: 275 TMHKSWAKVSRYKEQMRKIQAAGIDVSTEMVVGADGDTVESIRNTADFITENKITVPRFY 334

Query: 206 QLTIEKGTLFY-------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            LT   GT+FY       ++  +               N++    +      Y
Sbjct: 335 ILTPIPGTVFYNEMKEAGRLISEDIYQFNGAFAVHKPMNMSAETLTDEYWKLY 387


>gi|261878931|ref|ZP_06005358.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bergensis DSM
           17361]
 gi|270334514|gb|EFA45300.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bergensis DSM
           17361]
          Length = 452

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   ++S L E+       G + ++    ++   G  P+ 
Sbjct: 165 CNNFCHYC---IVPFTRGRERSRDVESILKEV-HDLHDKGFKEVTLLGQNVNSYGLLPNG 220

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + +        ++ +     NP  +  +  Q         N I   VQS 
Sbjct: 221 KRPENGTSFAELLRLVAREVPDMRVRFTTSNPEDMTEDIIQAVADEPNLCNHIHFPVQSG 280

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +   + +  +   R I P      D+      +T    +M L       
Sbjct: 281 SSKILKLMNRKYTREDYLEKVAAIRRIIPDCGLTTDVFVGYHDETEEDHQMTLDLMREVG 340

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   K
Sbjct: 341 FDSAFMFKYSERPGTYAAK 359


>gi|295100395|emb|CBK97940.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii L2-6]
          Length = 431

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 19/228 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C ++C YC      R     +    +S L E++ +   +G R +         PS  L  
Sbjct: 152 CNRQCAYC---VIPRARGPVRSRSEESILAELRQLAA-SGYREVVLSAI--SLPSYGLDT 205

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             N+  +++  A+   +      ++  +P  +   +            +  L +QS    
Sbjct: 206 GTNLVELVEKCARVEGIERIRLGSL--DPDMLTPESITRLAAVDKLCPQYHLSLQSGCSA 263

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP----RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +LR + R + A +    +   R  +       + D I   P +T   +            
Sbjct: 264 TLRRMRRVYTAEQYAEVVRQLRAAYGDRPVSFTTDCICGFPGETEEDFRESCAFLKEIGF 323

Query: 200 DHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             + ++  +   GT    F     + +    S  +     ++ + + +
Sbjct: 324 LKVHVFPYSRRSGTPAYDFPDQVHEREKQARSREMNAIAEDIRREVLA 371


>gi|260891027|ref|ZP_05902290.1| Fe-S protein, radical SAM family [Leptotrichia hofstadii F0254]
 gi|260859054|gb|EEX73554.1| Fe-S protein, radical SAM family [Leptotrichia hofstadii F0254]
          Length = 455

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 77/243 (31%), Gaps = 29/243 (11%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F    +  K      +   L E+  +      R +  +        L+
Sbjct: 170 CPHHCDFCYKDAFY---QNGKSFYTQLVDDALKEIDRL----PGRHLYFLDDH-----LL 217

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P+    + +G+     +              +  +  +   +AG+  + +G ++   +
Sbjct: 218 GNPKFATELFEGMKGMNRLFQGAATVDSI----LTGDLIEKAAQAGLRSLFVGFETFSPE 273

Query: 144 SLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L+F  +N N       A+    ++   ++   ++ L       ++  ++  +  A+   
Sbjct: 274 NLKFSNKNQNLKRNYENAVKRLHSLGIMINGSFVFGLDYDDKDVFKRTVEWGVKNAITTS 333

Query: 203 SLYQLTIEKGTLFYKMH--------KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + + LT   GT  +K          ++ DL      V          I   +     E  
Sbjct: 334 TYHILTPYPGTRLFKRMEDEGRIITRNWDLYDTRHVVYKTRNMTADEIEQGYNWAYKEFY 393

Query: 255 NHS 257
             S
Sbjct: 394 KWS 396


>gi|283797908|ref|ZP_06347061.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
 gi|291074375|gb|EFE11739.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
 gi|295091886|emb|CBK77993.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium cf.
           saccharolyticum K10]
          Length = 483

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +  L     +  +  G    S    L
Sbjct: 200 CNNFCSYC-----IVPYVRGRERS-RRPEDIIKEIEGLVADGVVEVMLLGQNVNSYGKNL 253

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP   A +L  + +   +       + ++P  +     +  R +      + L +QS  
Sbjct: 254 PEPITFAELLRRVEQIEGLERIRF--MTSHPKDLSDELIEVMRDSKKICRHLHLPLQSGS 311

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +A     +   P +S   D+I   P +T   +E  L        
Sbjct: 312 SRILGQMNRRYTKEQYLALAEKIKTAIPDISLTTDIIVGFPGETKEDFEETLDVVRKVRY 371

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 372 DSAFTFIYSKRTGTPAAVM 390


>gi|196041435|ref|ZP_03108728.1| conserved hypothetical protein TIGR01212 [Bacillus cereus
           NVH0597-99]
 gi|196027683|gb|EDX66297.1| conserved hypothetical protein TIGR01212 [Bacillus cereus
           NVH0597-99]
          Length = 319

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +  +         K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHDIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + KGT   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|152982880|ref|YP_001351776.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Janthinobacterium sp. Marseille]
 gi|151282957|gb|ABR91367.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Janthinobacterium sp. Marseille]
          Length = 541

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 74/232 (31%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEP 86
           C  KC +C   S + +     +  +  FL E++ +              F     S ++ 
Sbjct: 214 CPFKCEFC--LSALDKTAWPYD--LDLFLGELETLHARGARLFKFVDRTFNLNIKSSLKI 269

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
                 LD +  +      V    E  P  +     +G +K  AG  +  +G+QS   + 
Sbjct: 270 MQFF--LDKLEAHP--EDPVYAHFEVVPDHLPDALKEGIKKFPAGTLQFEIGIQSFNPEV 325

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              + R  N  +A   I          +  DLI  LP + +  +     R L      + 
Sbjct: 326 QTLVSRKQNNEKAAENIRWLCENSHAHLHVDLIAGLPGEDVASFARGFDRLLELGPHEIQ 385

Query: 204 LYQLTIEKGTLFYKMHKDG----DLVLPSENVA--VDLYNLTQSITSAHGLH 249
              L   +GT   +  +D     D   P   +A     +N  Q +       
Sbjct: 386 FGILKRLRGTPIIRHTQDYGLVFDPYPPYTILATDRIDFNEMQQLVRFARYW 437


>gi|86356079|ref|YP_467971.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli CFN 42]
 gi|86280181|gb|ABC89244.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase subunit
           protein [Rhizobium etli CFN 42]
          Length = 509

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 83/226 (36%), Gaps = 16/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L   + +  I      P+     
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRSPE------GFAKEIARLYREQGVELINLADENPTSSRRA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   IA+N  V    +I        +  + +    YRKAGV R  LG+++ +E +L
Sbjct: 257 WLAFLEAMIAENVPV----QIVGSTRTDDIVRDADILHLYRKAGVVRWLLGMENTDEATL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++ ++      ++ LSY  D +   
Sbjct: 313 ALIKKGGAKTTDREAIRLLRQHDILSMATWVVGFEEEKLSDLWRGFRQLLSYDPDQIQAL 372

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +T  + T F+++ +D  ++       +  ++    +     LH +
Sbjct: 373 YVTPHRWTPFFRIARDRQVI----ETDIRKWDYKHQVLKMRYLHPF 414


>gi|83746116|ref|ZP_00943171.1| COG0621, tRNA 2-methylthioadenosine synthase [Ralstonia
           solanacearum UW551]
 gi|207727985|ref|YP_002256379.1| hypothetical protein RSMK04402 [Ralstonia solanacearum MolK2]
 gi|207742384|ref|YP_002258776.1| hypothetical protein RSIPO_00571 [Ralstonia solanacearum IPO1609]
 gi|83727299|gb|EAP74422.1| COG0621, tRNA 2-methylthioadenosine synthase [Ralstonia
           solanacearum UW551]
 gi|206591228|emb|CAQ56840.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
 gi|206593774|emb|CAQ60701.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 464

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 19/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS---------ISSIFFGG 78
           C K C YC       R +     F            Q     +         +  +    
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYVGKMGSKA 213

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLG 136
              S  E  + AL+L+ +A+   +      T  ++P        + Y   +  V+ + L 
Sbjct: 214 NDSS--ERADFALLLEYVAEIPGIERIRYTT--SHPKEFTSRLIEAYATNRKLVDHLHLP 269

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQ   ++ L  + R +   E  + I   R I P +S   D I   P +T   +   +   
Sbjct: 270 VQHGSDRILMAMKRGYTVLEYKSIIRKLRTIRPDISIATDFIVGFPGETDADFAKTMDLV 329

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
                D+   +  +   GT    +H
Sbjct: 330 HEIGYDNSFSFIYSPRPGTPAANLH 354


>gi|188585777|ref|YP_001917322.1| Radical SAM domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350464|gb|ACB84734.1| Radical SAM domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 291

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     + + K  +   ++  + +++  ++      +  IF   G    ++ + +  
Sbjct: 30  CTFCS----MYKDKQFRIRSLEEIMEDLETAKKQFP--KVERIFLADGNALALKTEKLKE 83

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IL  I +         ++I + P  +    ++  +   + G++   LG++S  +  L  +
Sbjct: 84  ILLKIKEL--FPECQRVSIYSGPKDILRKSLDELKTLNELGLSIAYLGIESGSDNILTKI 141

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM----ELQRALSYAVDHLSL 204
            +   A E   A         ++S  +I  L   +   WE       + A     D+L+L
Sbjct: 142 NKGVTAQEITEAGKKIMASGIKLSATIISGLG--SKENWEEHALASAKVASEINPDYLAL 199

Query: 205 YQLTIEKGTLFYKMHKDGDLVL 226
             L ++ GT  Y+    G   L
Sbjct: 200 LTLLVQPGTKLYEDVNSGKFQL 221


>gi|168008611|ref|XP_001757000.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691871|gb|EDQ78231.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 523

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 50/164 (30%), Gaps = 9/164 (5%)

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +   ++  +L                   +P     +     R      N + L  QS  
Sbjct: 272 LSFAHLLDVLSSQYPEMRFR-----FTSPHPKDFPDDLLFLMRDRPNICNMVHLPAQSGS 326

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +A +   R I P +S   D I     +T    +  L+       
Sbjct: 327 TRVLERMRRGYTREAYLACVDRIRMIIPDVSISSDFISGFCGETEEDHQDTLKLVAEVGY 386

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           D   ++  ++ + T  ++ ++D            ++    +  T
Sbjct: 387 DMAYMFAYSMREKTHAHRNYEDDVPEPVKNRRLAEMITTFRETT 430


>gi|78187582|ref|YP_375625.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273]
 gi|78167484|gb|ABB24582.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273]
          Length = 438

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 68/225 (30%), Gaps = 24/225 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C   C YC   +        +    +  L +   +        + S         GG   
Sbjct: 158 CDYLCAYC---TIPLARGRSRSIEPEDVLRQAHRLAGSGYREIVLSGVNTGDYRSGGVDF 214

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
               P  + ++ +       +SS         P  +     Q    +   V    L +QS
Sbjct: 215 ----PALLRMLEEVPVSRIRISS-------LEPDMLSPAFLQVVGSSARIVPHFHLPLQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             +  LR + R + A     A+H  R +     +  D++   P +    ++         
Sbjct: 264 GSDPVLRAMRRRYTAEGYRRAVHALREVLPGCAVGADVMVGYPGEEEEDFQAMYGFIEQL 323

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            + +L ++  ++  GTL  +    G+ +  +         L   +
Sbjct: 324 PLSYLHVFSCSVRPGTLLGRQVAGGERLRVNPKETARRSALLVEL 368


>gi|116626541|ref|YP_828697.1| radical SAM domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116229703|gb|ABJ88412.1| Radical SAM domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 486

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 66/218 (30%), Gaps = 24/218 (11%)

Query: 28  CVKKCPYCDFN-SHVR-----RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C +C +  +H       R      N ++  L +   M+++                
Sbjct: 205 CPALCTFCLWPQTHSGHRWRLRSSDDVANEVRYALEQFPQMKEI---------------- 248

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSL 140
              +        +   +       +  T       + +    +  ++AG   + +G +S 
Sbjct: 249 -FFDDDTFNYRKERTIELCKKLKPLNFTWSCTSRVTTDYETLKAMKEAGCRLLIVGYESG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++Q L+ + +      A       + +   +  D I  LP +T       +  A     +
Sbjct: 308 DQQILKNIKKGATVDMAERFTANCKKLGLLVHGDFIIGLPGETRESIRKTIDFAKRLDNE 367

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            + +       GT FY   K   L+        + + L
Sbjct: 368 TIQVSIAHPYPGTEFYDYVKQNGLITIDSMTDENGHQL 405


>gi|298293310|ref|YP_003695249.1| MiaB-like tRNA modifying enzyme [Starkeya novella DSM 506]
 gi|296929821|gb|ADH90630.1| MiaB-like tRNA modifying enzyme [Starkeya novella DSM 506]
          Length = 428

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 74/202 (36%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +   + + +  ++ + +      + +      +G   P  
Sbjct: 157 CDHRCTFC---IIPYGRGNSRSVPMGAVVERVRALVEQGFGEVVLTGVDLTSWGADLPGT 213

Query: 84  IEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                +   +L  + +   +  +   +IEA     + +  + + +    +  + L +Q+ 
Sbjct: 214 PRLGALVRALLKHVPELRRLRLSSIDSIEA-----DGDLLRAFAEEERLMPHLHLSLQAG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H   +AI      R + P   +  DLI   P +T  Q+   L    +  
Sbjct: 269 NDLILKRMKRRHLRRDAIRFCAEVRRLRPDMVLGADLIAGFPTETEAQFRASLDLVDACG 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + HL ++  +   GT   +M +
Sbjct: 329 LTHLHVFPFSPRPGTPAARMPQ 350


>gi|148261480|ref|YP_001235607.1| MiaB-like tRNA modifying enzyme [Acidiphilium cryptum JF-5]
 gi|146403161|gb|ABQ31688.1| MiaB-like tRNA modifying enzyme [Acidiphilium cryptum JF-5]
          Length = 411

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    I      ++ +R L            +    +G   
Sbjct: 138 CDHRCTFC-----IIPYGRGPSRSIP-LGAVVEQVRTLVANGYNEVVLTGVDLTSYGADL 191

Query: 81  PSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P   +   +   +L  +     +          +P+ ++ + ++        +  + L V
Sbjct: 192 PGAPKLGQLCRRLLAAVPDLPRLR-----LSSIDPAEIDDDLWRLLESEPRLMPHLHLSV 246

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           Q+  +  L+ + R H     I A   AR + P +    DLI   P +T   +   L    
Sbjct: 247 QAGSDLILKRMKRRHLRHHVIEAAARARALRPDIALGADLIAGFPTETEAHFAETLALVD 306

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
              +D+L ++  +  KGT   ++ 
Sbjct: 307 DAGLDYLHVFPFSARKGTPAARIP 330


>gi|159899698|ref|YP_001545945.1| radical SAM domain-containing protein [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892737|gb|ABX05817.1| Radical SAM domain protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 646

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 72/240 (30%), Gaps = 10/240 (4%)

Query: 28  CVKKCPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + CPY C F  + R         +      +  +      +   +I F     +L+  
Sbjct: 208 CSRWCPYGCTFCLYGRNMGTKLGGRMFGSQRVLDEVA-WARQQGARAIHFVEANLNLLP- 265

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            N   ++ G+           I  E     ++  + +   +AG+    +G+QS    +L+
Sbjct: 266 -NFRELMRGLQSINQPEPTP-IYAELRGEHLKPESVEALVQAGLTVAEVGLQSANRTALQ 323

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +GR  +  +              +  D+I  LP+         ++      +    ++ 
Sbjct: 324 AVGRRTDLEKWAEGTRRLYQHDVAVLLDVILGLPEDDADSTHATIEWIQQQQLGDYDIFT 383

Query: 207 LTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSI--TSAHGLHAYEISNHSFLGA 261
           L +  GT                P   +  + +   Q +            +   +  G 
Sbjct: 384 LQVLPGTGVRNDAERFGMHFQDRPPYYILANHWLNYQQLRALRWDLREQAGLDPLAIEGM 443


>gi|54025805|ref|YP_120047.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Nocardia
           farcinica IFM 10152]
 gi|81374170|sp|Q5YT08|MIAB_NOCFA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|54017313|dbj|BAD58683.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 503

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 71/229 (31%), Gaps = 15/229 (6%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L A+ + +  +  ++   +V     C   C +C       R K              
Sbjct: 130 LESLEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC--IVPALRGKEVDRRPGDVLAEVQ 187

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEAN 113
             + Q     ++          S  +P         A +L        +          +
Sbjct: 188 ALVDQGVLEVTLLGQNVNSYGASFADPDEPRDRGAFAKLLRACGGIEGLERVRF--TSPH 245

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFP 169
           P+    +  +   +      ++ + +QS  ++ L+ + R++  +  +  I    A     
Sbjct: 246 PAEFTDDVIEAMAQTPNICPQLHMPLQSGSDRVLKAMRRSYRKARYLGIIEKVRAAMPHA 305

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            ++ D+I   P +T   ++  L             +Q +   GT   +M
Sbjct: 306 AITTDIIVGFPGETEEDFQETLDVVRQARFTSAFTFQYSKRPGTPAAEM 354


>gi|84515221|ref|ZP_01002583.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis
           SKA53]
 gi|84510504|gb|EAQ06959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis
           SKA53]
          Length = 436

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 80/244 (32%), Gaps = 20/244 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  L E + +    G R ++    ++    G    
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREARELVD-AGVRELTLLGQNVNAYHG---- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
              + +A ++  + +   +      T  ++P+ ++      +   +  +  + L VQS  
Sbjct: 211 -HERGLAGLIWALTEIDGLERIRFTT--SHPNDMDQALIDAHGTCEKLMPYLHLPVQSGS 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H A   +  I   R   P +  S D I   P +T   +E  LQ       
Sbjct: 268 DRILKAMNRKHTAESYLRLIDRIRAARPDILLSGDFIVGFPGETDQDFEDTLQLVRDVHY 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN-HSF 258
                ++ +   GT   +  +  D V+      +      Q   +   +   E+      
Sbjct: 328 GQAYSFKYSTRPGTPAAEKPQLPDDVMNERLQRLQALLRDQQQQTQASMIGREVKVLFEK 387

Query: 259 LGAE 262
            G E
Sbjct: 388 AGRE 391


>gi|260494842|ref|ZP_05814972.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
 gi|260198004|gb|EEW95521.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
          Length = 435

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVKG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D+  ++  +I KGT    M    D
Sbjct: 326 DNSYMFMYSIRKGTKAATMDNQID 349


>gi|237745063|ref|ZP_04575544.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 7_1]
 gi|256026731|ref|ZP_05440565.1| MIAB protein [Fusobacterium sp. D11]
 gi|289764728|ref|ZP_06524106.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. D11]
 gi|229432292|gb|EEO42504.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 7_1]
 gi|289716283|gb|EFD80295.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. D11]
          Length = 435

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVKG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D+  ++  +I KGT    M    D
Sbjct: 326 DNSYMFMYSIRKGTKAATMDNQID 349


>gi|225024104|ref|ZP_03713296.1| hypothetical protein EIKCOROL_00972 [Eikenella corrodens ATCC
           23834]
 gi|224943129|gb|EEG24338.1| hypothetical protein EIKCOROL_00972 [Eikenella corrodens ATCC
           23834]
          Length = 441

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     ++
Sbjct: 157 CSKYCSFCVVPYTRGEEFSRPLGDVLTEIAGLAQQ-GVKEINLLGQNVNAYRGE----MD 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P        + YR     V+ + L +QS  +
Sbjct: 212 NGEICDFATLLRIVHEIPGIERLRFTTSHPREFSDAIIECYRDLPKLVSHLHLPIQSGSD 271

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 272 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 331

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 332 LSFVFIYSPRPGTPAANLP 350


>gi|152979971|ref|YP_001352121.1| tRNA modifying enzyme [Janthinobacterium sp. Marseille]
 gi|229890610|sp|A6SV24|MIAB_JANMA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|151280048|gb|ABR88458.1| tRNA modifying enzyme [Janthinobacterium sp. Marseille]
          Length = 446

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R +     F            Q     ++           + + +
Sbjct: 157 CSKYCSYC--VVPYTRGEEVSRRFEDVLAEVAGLEAQGVKEITLLGQNVNAYRGEMADGE 214

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + AL+++ IA+   +     +T  ++P          Y K    VN + L  Q   ++
Sbjct: 215 IADFALLIEYIAELEGIERIRFVT--SHPKEFTQRLIDAYAKVPKLVNHLYLPAQHGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + + E  + +   R + P +S   D I   P +T   +E  ++       D+
Sbjct: 273 ILAAMKRGYTSLEYKSILRRLREVRPNISISSDFIVGFPGETDADFEAMMKLINDIGYDN 332

Query: 202 LSLYQLTIEKGTLFYKM 218
              +  +   GT    +
Sbjct: 333 SFSFIFSPRPGTPAANL 349


>gi|323140809|ref|ZP_08075724.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414691|gb|EFY05495.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phascolarctobacterium sp.
           YIT 12067]
          Length = 442

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 15/249 (6%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           S +E +M  Q  +S   ++   + C   C YC            +   I + + E++   
Sbjct: 137 SEFEGHMVRQ--SSFAAWIPIMYGCNNFCTYC---IVPYVRGRERSRSIDNIVAEIEAAV 191

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNN 121
           +            G    S  +          + +   +   VE    + ++P  +    
Sbjct: 192 KDGYK---EFTLLGQNVNSYGKDFGDKDAFAKLLRRVDIIPGVERIHYMTSHPRDMSEEV 248

Query: 122 FQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIY 177
            +   +         +  Q+   + LR + R +   + +  + L R   P   ++ D+I 
Sbjct: 249 IKAVAECEHICENFHMPFQAGSSEILRRMNRGYTKEKYLELVKLVRKYVPDATITTDIIV 308

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T   +E  L             +  +   GT   KM     L +  E +   +  
Sbjct: 309 GFPGETEENFEETLDVVRQVGFTSAYTFIYSKRSGTPAAKMENQVPLAVKKERLNRLMAL 368

Query: 238 LTQSITSAH 246
             ++    H
Sbjct: 369 QNENSLKCH 377


>gi|296114905|ref|ZP_06833553.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978611|gb|EFG85341.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter hansenii ATCC
           23769]
          Length = 416

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 19/202 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPS 82
           C  +C +C     +   +    +     + E       +G R +         +GG  P 
Sbjct: 140 CDHRCTFC----IIPFGRGPSRSVPVGVVVEQVRALVASGYREVVMTGVDITSWGGDLPG 195

Query: 83  LIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   +L  + +   +          +P  ++   +Q        +  + L +Q+
Sbjct: 196 QPSLGQLCRRLLALVPELERLR-----LSSVDPVEIDDGLWQLLEHEPRFMPYLHLSLQA 250

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             +  L+ + R H   +  A I  AR + P +    D+I   P +    +   L      
Sbjct: 251 GSDMILKRMKRRHLTHDVAAVIARARGLRPDIGIGADVIAGFPTEDEALFNETLDFIAGQ 310

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           A+ +L ++  +   GT   +M 
Sbjct: 311 ALPYLHVFPYSERPGTPAARMP 332


>gi|168335412|ref|ZP_02693503.1| MiaB-like tRNA modifying enzyme YliG [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 446

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 62/204 (30%), Gaps = 12/204 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +  +      ++           +S I       ++    
Sbjct: 157 CNSHCTYC-------IIPSLRGQYRSRPKEKIVEEVMQLAEDGVSEIILVAQNTTMYGID 209

Query: 88  NIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               + + + +   +        +   P ++     +  +        + + +Q   +Q 
Sbjct: 210 KGYTLTNLLQELSDIDGIEWIRILYCYPENITDELIEEIKVNSKVCKYLDIPIQHSSDQI 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R  + +     I   R+  P +     LI   P +T   +   +       +D L
Sbjct: 270 LKRMNRKSSNAFLKQLIQKLRDNIPNIMIRSTLIVGFPGETEEDFNNLIDFVKETKLDRL 329

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVL 226
            ++  + E+GT   K+    D  +
Sbjct: 330 GVFTYSQEEGTPAAKLANQIDEHI 353


>gi|46446860|ref|YP_008225.1| hypothetical protein pc1226 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81626909|sp|Q6MBU9|RIMO_PARUW RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|46400501|emb|CAF23950.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 475

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 74/207 (35%), Gaps = 24/207 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK-VGQENFIQSF-------LTEMQWMRQLTGPRSISSIFFGGG 79
           C K+C YC   +     K  G+E  ++ F       + E+  + Q  G            
Sbjct: 185 CRKRCAYCVIPTIKGPLKSKGKEQILKEFNLLLSQGVKEVILIAQDLGDYGKDQG----- 239

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLG 136
                  + +  +L+ +     +     + +    P  +        +        + + 
Sbjct: 240 ------AKKLTALLNLLQSMLEIKQAFWLRLLYLYPDEITDELIALMKSDSRICPYLDMP 293

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q +  Q L+ + R  +  + I  I   R   P ++    LI   P +T  Q++  +Q  
Sbjct: 294 IQHVNNQILKSMRRATSKEDIIEIITKLRREIPNVAIRTSLIVGFPGETEEQFQELIQFV 353

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             Y ++++ +++ + E G+  Y +   
Sbjct: 354 QDYPLENVGIFKFSREPGSHAYDLPNQ 380


>gi|307207026|gb|EFN84849.1| CDKAL1-like protein [Harpegnathos saltator]
          Length = 542

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 84/235 (35%), Gaps = 25/235 (10%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        +  +   L   +         S  +  +G    + + 
Sbjct: 205 CLNQCTYCK-TKHARGQLGSYPPDEIVARALQAFEEGVCELWITSEDTGAYGRDIGTNL- 262

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  ++D I ++  +   +      NP  + + +     K        + + + VQS 
Sbjct: 263 PELLWKLVDVIPESCMMRIGM-----TNPPYI-LEHLDEIAKILRHPKVYSFLHIPVQSG 316

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +Q L  + R +  ++    ++  R   P ++   D+I   P +T   +E  L     Y 
Sbjct: 317 SDQVLADMKREYTRADFEHVVNYLRERVPDLTIATDIICGFPSETEENFEETLTLCRKYK 376

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              L + Q     GT   +M +     +P++ V      LT+     +    YE 
Sbjct: 377 FPSLFINQFFPRPGTPAARMPR-----IPTQQVKARTKKLTELF---YSYEPYEN 423


>gi|260893774|ref|YP_003239871.1| MiaB-like tRNA modifying enzyme YliG [Ammonifex degensii KC4]
 gi|260865915|gb|ACX53021.1| MiaB-like tRNA modifying enzyme YliG [Ammonifex degensii KC4]
          Length = 436

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 57/201 (28%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       R    +  +      E+         R +  +       +     
Sbjct: 151 CSHRCSFC-------RIPYLRGPYRSRPPEEILREAAELAERGVKELILVAQDTTSWGID 203

Query: 88  NIAL---ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                   L                + A+P+S+     +   K       + L +Q L  
Sbjct: 204 LYGRPSLALLLRELAALEKVKWIRILYAHPASITDELLEVMAKEDKICRYLDLPLQHLSP 263

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR     +    +   R   P +      I   P +    + + L+       +
Sbjct: 264 RILKRMGR--PLIDPHRLVQRIRKALPGVVLRTTFIVGFPGEEKEDFALLLRGVRELGFE 321

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            + ++    E+GT    + + 
Sbjct: 322 RIGIFPYYREEGTPAASLPEQ 342


>gi|256828394|ref|YP_003157122.1| MiaB family RNA modification protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577570|gb|ACU88706.1| RNA modification enzyme, MiaB family [Desulfomicrobium baculatum
           DSM 4028]
          Length = 444

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 13/198 (6%)

Query: 28  CVKKCPYC--DFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC   F       R         ++ +        L G    S      G  + 
Sbjct: 154 CDNFCAYCIVPFTRGRQKSRSSDAVVAECEALVRRGARELTLLGQNVNSYGQDKHGDGTS 213

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV-NNFQGYRKAGVNRISLGVQSLEE 142
               ++   +  I     +        +  P  V               ++ L VQS  +
Sbjct: 214 F--ASLLERISAIPGLMRLKFTTSHPKDIAPEVVTAFGKLPNL----CPQLHLPVQSGSD 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR +  +  +  I   R + P+++   D+I   P +T+  +E  L+       +
Sbjct: 268 AVLKAMGRKYTRARYLDTIRELRRVCPQITLTTDIIVGFPGETLQDFEDTLELMREVRYE 327

Query: 201 HLSLYQLTIEKGTLFYKM 218
               ++ +   G    KM
Sbjct: 328 SSFSFKYSDRPGVRAEKM 345


>gi|120403419|ref|YP_953248.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           vanbaalenii PYR-1]
 gi|229890571|sp|A1T7U2|MIAB_MYCVP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|119956237|gb|ABM13242.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium vanbaalenii
           PYR-1]
          Length = 510

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + + +     +S   +V     C   C +C           V R        +QS +
Sbjct: 147 LQEFPSALPASRESSYAAWVSISVGCNNTCTFCIVPALRG--REVDRRPGDVLAEVQSLV 204

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPS 115
            +      L G +++++       P+  EP++       +     +     +     +P+
Sbjct: 205 DQGVLEITLLG-QNVNAYGVSFADPT--EPRDRGAFAKLLRACGRIDGLERVRFTSPHPA 261

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P   +
Sbjct: 262 EFTDDVIEAMAETPNVCPTLHMPLQSGSDRILRAMRRSYRAERYLGIIDRVRAAIPHAAI 321

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           + DLI   P +T   ++  L    +        +Q +   GT 
Sbjct: 322 TTDLIVGFPGETEEDFQATLDVVAASRFSSAFTFQYSKRPGTP 364


>gi|15895688|ref|NP_349037.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|15025438|gb|AAK80377.1|AE007742_11 Oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|325509838|gb|ADZ21474.1| Oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium acetobutylicum EA 2018]
          Length = 290

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 88/242 (36%), Gaps = 17/242 (7%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C     + + K  +   ++    ++   R++     ++ IF   G    +  
Sbjct: 25  CSHNRCSFCS----MYKEKQFRIRSVKEIFEDLYEAREIYS--RVNKIFLADGD--ALVI 76

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +   L    +           I I A P  +      +    +  G++ + +G++S  + 
Sbjct: 77  EKDILKKILLKIKELFPECKRIGIYAAPRDILNKSEEDLIELKSTGLSIVYMGIESGNDS 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            L  + +   + E + A    +    ++S  LI  +  +           +       D+
Sbjct: 137 ILNEIHKGVTSKEIVEAGQKVKKSGIKLSVTLISGIGGKNKIKENAVESAKVINLINPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLV-LPSENVAVDLYNLTQSIT--SAHGLHAYEISNHSF 258
           + +  L +EKGT  YK  +  +   L  +   +++  L ++I         +   SN++ 
Sbjct: 197 IGILTLMVEKGTEIYKKVQKDEFELLSPKENMIEMKELIENINVKEECVFRSNHASNYAS 256

Query: 259 LG 260
           +G
Sbjct: 257 IG 258


>gi|325268417|ref|ZP_08135049.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella multiformis
           DSM 16608]
 gi|324989271|gb|EGC21222.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella multiformis
           DSM 16608]
          Length = 442

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 65/199 (32%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC            +   ++S L E+       G + ++    ++   G  P+ 
Sbjct: 155 CNNFCHYC---IVPFTRGRERSRDVESILKEV-HDLHDKGFKEVTLLGQNVNSYGLLPNG 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+N     + + K      ++ +     NP  +  +  +         + I    QS 
Sbjct: 211 RRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIVEAVAAEPNLCHHIHFPAQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +   + +A +   R + P      D+      +T   ++  L       
Sbjct: 271 SNNVLKLMNRKYTREDYLAKVAAIRRLVPDCGLTTDIFIGYHNETEEDFQQTLSLMREVG 330

Query: 199 VDHLSLYQLTIEKGTLFYK 217
            D   +++ +   GT   +
Sbjct: 331 FDSAFMFKYSERPGTYAAR 349


>gi|158522576|ref|YP_001530446.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511402|gb|ABW68369.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 426

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 76/222 (34%), Gaps = 18/222 (8%)

Query: 25  WPF-----CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            PF     C   C YC   S   R    ++  +   +  +   RQ       S +FF   
Sbjct: 193 VPFQTRRGCPMDCSYCSTASIEGRTTRKRD--LSRVIDTLAAYRQAG----FSHLFFVDN 246

Query: 80  TPSLIEPQNIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           T ++  P     + DGI  KN  +S    +     P  ++ +  +    AG   +SLG +
Sbjct: 247 TFNI-PPSYAKALCDGIIEKNLNLSWRCIV----YPWKIDNDLAEKMASAGCKEVSLGFE 301

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S   Q LR   +     +  A     +    + +  L+   P +T    +  L    S  
Sbjct: 302 SGSAQMLRAFNKKFTPDDVRAVSAALKQFNIKQTGFLLLGGPGETEQTIQESLAFVESLN 361

Query: 199 VDHLSLYQ-LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +D   +   + I   T   +      ++ P + +    + + 
Sbjct: 362 LDATKITSGIRIYPETQLARQAVAQGIIAPDDTLLFPRFYMA 403


>gi|331084033|ref|ZP_08333140.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330402395|gb|EGG81965.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 491

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 81/237 (34%), Gaps = 19/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   ++    ++ + +L     +  +  G    S    L
Sbjct: 209 CNNFCSYC-----IVPYVRGRERS-RNPKDIVREIERLVKDGVVEVMLLGQNVNSYGKNL 262

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP   A +L  I K   +       + ++P  +     +  + +      + L +QS  
Sbjct: 263 DEPMTFAQLLTEIEKIEGLKRIRF--MTSHPKDLSDELIEVMKNSKKICKHLHLPLQSGS 320

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R ++  + +  +   R   P +S   D+I   P +T   +   +        
Sbjct: 321 SDILQKMNRRYDKEKYLNLVEKIRTAIPDISLTTDIIVGFPGETEEDFLETVDVVKKVRY 380

Query: 200 DHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D    +  +   GT          +G +      +   + ++ + +++       E+
Sbjct: 381 DSAFTFIYSKRTGTPAAVMENQVSEGVVKDRFNRLLETVQSIGREMSARDTGKVMEV 437


>gi|303232055|ref|ZP_07318758.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513161|gb|EFL55200.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 438

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++          + +  L    +   + F  GT 
Sbjct: 154 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTELGAKGFKEITLLGQNVNSYGLDFKDGT- 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 212 ------DFGTLVDALDHIPGIERIRY--MTSHPQDMTKSMIDALGRSSNIVTHLHLPIQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R++        +   R     +    D+I   P +T   +E  LQ     
Sbjct: 264 GSDRILKKMNRHYTVEHYKELLSYCREKIKNVVVTTDIIVGFPGETEEDFEQTLQLLKDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 324 RYDMAYTFIYSKRSGTPAATM 344


>gi|295115178|emb|CBL36025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
           bacterium SM4/1]
          Length = 457

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +  L     +  +  G    S    L
Sbjct: 174 CNNFCSYC-----IVPYVRGRERS-RRPEDIIKEIEGLVADGVVEVMLLGQNVNSYGKNL 227

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP   A +L  + +   +       + ++P  +     +  R +      + L +QS  
Sbjct: 228 PEPITFAELLRRVEQIEGLERIRF--MTSHPKDLSDELIEVMRDSKKICRHLHLPLQSGR 285

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +A     +   P +S   D+I   P +T   +E  L        
Sbjct: 286 SRILGQMNRRYTKEQYLALAEKIKTAIPDISLTTDIIVGFPGETKEDFEETLDVVRKVRY 345

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 346 DSAFTFIYSKRTGTPAAVM 364


>gi|258543518|ref|YP_003188951.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256634596|dbj|BAI00572.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256637652|dbj|BAI03621.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256640706|dbj|BAI06668.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256643761|dbj|BAI09716.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256646816|dbj|BAI12764.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256649869|dbj|BAI15810.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256652859|dbj|BAI18793.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256655913|dbj|BAI21840.1| tRNA 2-methylthioadenosine synthase MiaB [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 414

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 72/201 (35%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C            +   + + +   + +R L        +  G    S    +
Sbjct: 140 CNHRCTFC---IIPFGRGPSRSVPVGAVV---EQVRALVQSGYREVVLTGVDMTSW--GE 191

Query: 88  NIAL---ILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           ++     +     +   +   +E       +P  ++ + +Q   +    +  + L +Q+ 
Sbjct: 192 DLPGKPVLGQLCRRVLRLVPELERMRLSSVDPVEIDEDIWQLLAEEPRFMPYLHLSLQAG 251

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H  ++A   +  AR + P +    D+I   P +  + +E         A
Sbjct: 252 SDLILKRMKRRHLVADAARVVERARKLRPDIGIGADVIAGFPTEDESLFEETRSFLAQQA 311

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + +L ++  +   GT   +M 
Sbjct: 312 LPYLHVFPYSERPGTPAARMR 332


>gi|281416862|ref|ZP_06247882.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
           JW20]
 gi|281408264|gb|EFB38522.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
           JW20]
          Length = 434

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 69/192 (35%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +S    ++ +  L        +  G    S  +  
Sbjct: 153 CNQFCTYC----IIPYARGPVRS--RSEENILKEVSGLAHSGYKEVVLTGIHVASYGKDI 206

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D I K   +     I +    P++V     +  +       +  + +QS  + +
Sbjct: 207 KNTSLIDIIRKVHEIEGIERIRLGSIEPTTVTEEFVRAIKGMEKLCPQFHISLQSGCDST 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E + ++ L R     ++   D++   P +T  ++    +         +
Sbjct: 267 LKRMNRKYTTKEYLKSVELLRENLKDVAVTTDVMVGFPGETDEEFNETCRFVEKVLFARM 326

Query: 203 SLYQLTIEKGTL 214
            +++ +  KGT 
Sbjct: 327 HVFKYSRRKGTP 338


>gi|171057275|ref|YP_001789624.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptothrix
           cholodnii SP-6]
 gi|229890558|sp|B1XYX5|MIAB_LEPCP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|170774720|gb|ACB32859.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptothrix cholodnii
           SP-6]
          Length = 469

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 66/202 (32%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTP 81
           C K C YC                    LTE+  +            +++++     G  
Sbjct: 179 CSKYCSYC---VVPYTRGEEFSRPFDEVLTEVAGLADQGVKEVTLLGQNVNAYRGRMGDT 235

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           S  +  + A +L+ + +   +      T  ++P+       + Y +    VN + L VQ 
Sbjct: 236 S--DIADFATLLEYVHEIPGIERIRYTT--SHPNEFTPALIEAYARLPKLVNHLHLPVQH 291

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D I   P +T       ++     
Sbjct: 292 GSDRILSGMKRGYTVLEYKSTIRKLRAIRPDISLSTDFIVGFPGETDDDHARTMKLIDDI 351

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D    +  +   GT    +H
Sbjct: 352 GFDASFSFIFSPRPGTPAAALH 373


>gi|153008261|ref|YP_001369476.1| MiaB-like tRNA modifying enzyme [Ochrobactrum anthropi ATCC 49188]
 gi|151560149|gb|ABS13647.1| MiaB-like tRNA modifying enzyme [Ochrobactrum anthropi ATCC 49188]
          Length = 427

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    +      +  +++L G          +    +G   
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 81  PSLIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
           P  +    +   +L+ +     +  +   +IEA+   ++       ++  +  + L +Q+
Sbjct: 204 PGSLRLGKLVKTVLNQVPDLQRLRLSSIDSIEADDDLMDA--IANEKRL-MPHLHLSLQA 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   ++I      R++ P + F  D+I   P +T   +   L+     
Sbjct: 261 GDDMILKRMKRRHLRDDSIRFCETVRSLRPDIVFGADIIAGFPTETEDMFRNSLKIVEEC 320

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            + HL ++  +  +GT   +M +
Sbjct: 321 GLSHLHVFPYSAREGTPAARMPQ 343


>gi|319901973|ref|YP_004161701.1| Radical SAM domain protein [Bacteroides helcogenes P 36-108]
 gi|319417004|gb|ADV44115.1| Radical SAM domain protein [Bacteroides helcogenes P 36-108]
          Length = 345

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 66/197 (33%), Gaps = 17/197 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+  +    +  +    +   R+        +    GG  S +E +
Sbjct: 62  CRNNCYYCG----IRKENINIPRYGLTKEEILSCCRE-GYHLGFRTFVLQGGELSGMEDE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  I + +      +  I  +        ++ + +AG NR  L  ++  E+  R 
Sbjct: 117 RMVEIVASIRREFP-----DCAITLSLGEKSREVYKCFFEAGANRYLLRHETYNEEHYRK 171

Query: 148 LGRNHNAS----EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   H         +  ++  + I  ++   ++   P QT+     +L     +  + + 
Sbjct: 172 L---HPEELSLPHRLECLNWLKEIGYQVGTGIMVGSPYQTIGHLVEDLLYIEQFRPEMIG 228

Query: 204 LYQLTIEKGTLFYKMHK 220
           +        T F     
Sbjct: 229 MGPFLPHHDTPFASYPP 245


>gi|304315299|ref|YP_003850446.1| hypothetical protein MTBMA_c15540 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588758|gb|ADL59133.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 430

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 82/255 (32%), Gaps = 22/255 (8%)

Query: 10  NMTGQGSNSLGVYV--HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +++ +      VY+  H   C   C +C       R    +   ++  + E++ +R+   
Sbjct: 146 DISQENIRGASVYIETHR-GCPGNCTFCQVPEFFGRE--VRSRPLEDIIREVRELRKSGA 202

Query: 68  PRSISSIFFGGGTPSL--------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV 119
            R        GGT +L        I+      +L  I++            +     V  
Sbjct: 203 RR----FAISGGTGTLYGSSRFRGIDEDAFTELLREISEITG--PRNLTVPDIRVDMVTP 256

Query: 120 NNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL 179
                  +     +  G++S   + LR + +     + I A+ LAR    +++   I   
Sbjct: 257 EILDAISEYTNGWVFYGIESGSRRILRRMKKGIKPGDVIEAVELAREHNLKVAGSFIVGY 316

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH---KDGDLVLPSENVAVDLY 236
           P +     E  L+ A    +D   +       GT         +D D  +  E       
Sbjct: 317 PGEDERDHEETLELADELMLDDYFVSIAEPIPGTELGDEVKGLEDEDNPVFMEPSDRKFR 376

Query: 237 NLTQSITSAHGLHAY 251
           +L +       L +Y
Sbjct: 377 SLAEERAFGFMLDSY 391


>gi|303228532|ref|ZP_07315360.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516779|gb|EFL58693.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 438

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++          + +  L    +   + F  GT 
Sbjct: 154 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTELGAKGFKEITLLGQNVNSYGLDFKDGT- 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 212 ------DFGTLVDALDHIPGIERIRY--MTSHPQDMTKSMIDALGRSSNIVTHLHLPIQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R++        +   R     +    D+I   P +T   +E  LQ     
Sbjct: 264 GSDRILKKMNRHYTVEHYKELLSYCREKIKNVVVTTDIIVGFPGETEEDFEQTLQLLKDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 324 RYDMAYTFIYSKRSGTPAATM 344


>gi|302346518|ref|YP_003814816.1| radical SAM domain protein [Prevotella melaninogenica ATCC 25845]
 gi|302150497|gb|ADK96758.1| radical SAM domain protein [Prevotella melaninogenica ATCC 25845]
          Length = 473

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 83/257 (32%), Gaps = 41/257 (15%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F S  + +   +   +   L E+  +      R +  +        L+
Sbjct: 170 CPHHCDFCYKDAFYSEGKSFYTRK---VDDALAEIDSL----PGRHLYFLDDH-----LL 217

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P   + + +G+     V  +           +  N  +   +AG+  + LG ++    
Sbjct: 218 GNPHFASELFEGMRGMGRVFQSASTVAAV----LNGNLIEKAAEAGLRSLFLGFETFSPD 273

Query: 144 SLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +LR   +  N + + +AA+    ++   ++   ++ L       ++  +   + +++   
Sbjct: 274 NLRSSNKLQNLSKDYVAAVKRLHSLGIMINGSFVFGLDHDDKDVFQRTVDWGIEHSITTA 333

Query: 203 SLYQLTIEKGTLFYKMHKDG----DLVLPSENVAVDLYN---LTQSITSAHGLHAYEISN 255
           + + LT   GT  ++  +             +    +Y    LT          AY    
Sbjct: 334 TFHILTPYPGTRLFQQMERDGRITSYDWSQYDTRTVVYKTLGLTAEELKQGYEWAY---- 389

Query: 256 HSFLGAESLHNLNYWRY 272
                    HN   W  
Sbjct: 390 ---------HNFYSWSN 397


>gi|153831444|ref|ZP_01984111.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae 623-39]
 gi|148873074|gb|EDL71209.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Vibrio cholerae 623-39]
          Length = 375

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 73/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 144 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 197

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 198 -HDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 256

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 257 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 316

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT       D    L  E     LY L Q I S    ++
Sbjct: 317 FDMSFSFIFSPRPGTPAA----DYPCDLSEEVKKERLYELQQQINSQAMRYS 364


>gi|257064347|ref|YP_003144019.1| iron-only hydrogenase maturation protein HydE [Slackia
           heliotrinireducens DSM 20476]
 gi|256792000|gb|ACV22670.1| iron-only hydrogenase maturation protein HydE [Slackia
           heliotrinireducens DSM 20476]
          Length = 351

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 62/197 (31%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +RR       +  + + ++     +       +    GG       
Sbjct: 65  FCKNDCLYCG----IRRSNRSCHRYRLA-VDQILACADVGYEVGFRTFVLQGGEDPWFTD 119

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +    + D + +      +  +T+     S    ++Q  R+AG +R  L  ++       
Sbjct: 120 E---RVCDCVRRLKQRHPDCAVTLSLGERS--PESYQALREAGADRYLLRHETATPGHYA 174

Query: 147 FLGRNHNASEAIAA----IHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              R H A  +  A    ++  R     +    +   P QT      +L+   ++A +  
Sbjct: 175 ---RLHPADMSWDARMACLYSLREAGFTVGCGFMVGSPFQTPADLAADLKFIETFAPEMC 231

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F    
Sbjct: 232 GIGPFIPHHATPFAAEP 248


>gi|220930550|ref|YP_002507459.1| biotin synthase [Clostridium cellulolyticum H10]
 gi|220000878|gb|ACL77479.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 345

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 23/198 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           FC   C YC     N +  RY++  E  +    T  +            +    GG    
Sbjct: 61  FCKNDCYYCGISKSNKNADRYRLSMEEILSCCETGYEL--------GFRTFVLQGGDDGY 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  I   +    +  IT+     S    +++ + +AG +R  L  ++  + 
Sbjct: 113 YSVDKVVEIIKKIKSAY---PDCAITLSIGEHSY--ESYKKFYEAGADRYLLRHETATDV 167

Query: 144 SLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L   H A  ++A     ++  + I  ++    +   P QT+     +L     +  
Sbjct: 168 HYKKL---HPAELSLANRKQCLYNLKEIGFQVGTGFMIGSPFQTVENLADDLLFIKEFKP 224

Query: 200 DHLSLYQLTIEKGTLFYK 217
             + +      K T F+ 
Sbjct: 225 HMIGIGPFIPHKDTRFFN 242


>gi|254448584|ref|ZP_05062043.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [gamma proteobacterium
           HTCC5015]
 gi|198261773|gb|EDY86059.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [gamma proteobacterium
           HTCC5015]
          Length = 446

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 68/221 (30%), Gaps = 16/221 (7%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   + E+  +    G R I+ +      + G T     
Sbjct: 144 CSKYCTFCVVPYTRGEEVSRPLDDVIAEIAQLAA-AGVREINLLGQNVNAYRGET----H 198

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     V     I     +P          Y+     V+ + L VQS  +
Sbjct: 199 EGEICDFATLLHYVAAVDGIDRIRYTTSHPVEFTDAIIDAYKTVPELVSHLHLPVQSGAD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H A E  + I   R       +S D I   P ++ T +E  +        D
Sbjct: 259 RILAAMKRGHMALEYKSKIRKLRKARPGLSLSSDFIIGFPGESETDFEQTMSLIREIGFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
               +  +   GT    +  D  + +  E + +    +  +
Sbjct: 319 TSFSFIYSARPGTPASNLPDDVPMTVKKERLKILQKEIADN 359


>gi|126741000|ref|ZP_01756683.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. SK209-2-6]
 gi|126717926|gb|EBA14645.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. SK209-2-6]
          Length = 420

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 80/220 (36%), Gaps = 27/220 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 149 CDHRCTFC-----IIPYGRGNSRSVPAGV-VIDQIKRLIDKGYNEVVLTGVDLTSWGADL 202

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISL 135
                    +  IL  +     +  +   +IEA+ + +                +  + L
Sbjct: 203 PATPRLGDLVMRILRLVPDLPRLRISSIDSIEADENLMQAIATEPRL-------MPHLHL 255

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q  ++  L+ + R H   +AIA    AR + P M+F  D+I   P +T   +E  L+ 
Sbjct: 256 SLQHGDDLILKRMARRHLRDDAIAFCEEARRLRPDMTFGADIIAGFPTETEAHFENSLKL 315

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                +  L ++  +  +GT   K+    +  L  E  A 
Sbjct: 316 VTDCDLTWLHVFPYSKREGTPAAKIPNQVNGKLIKERAAR 355


>gi|253987625|ref|YP_003038981.1| putative fe-s oxidoreductase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779075|emb|CAQ82235.1| predicted fe-s oxidoreductase [Photorhabdus asymbiotica]
          Length = 550

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 14/191 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   +++   K+     ++    +++ +          SI F        +  
Sbjct: 243 CRARCTFCS--TYLIHGKL-VSRPVELIAGDIEHLLTFGHD----SIQFH-------DDD 288

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +         +  +  N+  T  A    +     +    AG  ++ LGV+SL+++SL +
Sbjct: 289 LLQHENLHELLDLLLEFNIAWTCNARSEVITPALARRMYDAGCKKVFLGVESLDQRSLNY 348

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +       I A++   +    +    I   P  T+     +L R L+  +  L+   L
Sbjct: 349 YNKATTVEMNINAVNALNSSGIGVICGYIIGAPHDTVESILADLDRVLALPIYFLATAIL 408

Query: 208 TIEKGTLFYKM 218
           T + GT+ Y+ 
Sbjct: 409 TPDIGTVEYRR 419


>gi|256811070|ref|YP_003128439.1| MiaB-like tRNA modifying enzyme [Methanocaldococcus fervens AG86]
 gi|256794270|gb|ACV24939.1| MiaB-like tRNA modifying enzyme [Methanocaldococcus fervens AG86]
          Length = 418

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 119 VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DL 175
               + Y+   V + + L +QS +++ L+ + R +   E    +   R     + F  D+
Sbjct: 234 DELIEAYQNEKVGKFLHLPLQSGDDEILKKMNRGYTVDEFKEIVDEFRRKVRNLCFTTDI 293

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           I   P +T  Q++  L+       D++   + +  KGT   KM
Sbjct: 294 IVGFPGETEEQFQNTLEVLKELKPDYIHGAKYSQRKGTEAAKM 336


>gi|147668926|ref|YP_001213744.1| radical SAM domain-containing protein [Dehalococcoides sp. BAV1]
 gi|146269874|gb|ABQ16866.1| Radical SAM domain protein [Dehalococcoides sp. BAV1]
          Length = 494

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 77/254 (30%), Gaps = 22/254 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   +         +  ++  + +++    L     +  I F     +     
Sbjct: 193 CPFKCSFC--YNIPFHQGHRADLSVERIIAQIE---HLQKNYKVKFIRFFEDNFTF---- 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   + +           ++   E+  + +   +     KAG   + +GV++  ++ L +
Sbjct: 244 NRKRMREFCQTVIERRIKIKWDTESR-ADMSEEDVALMAKAGCTSVGIGVETGSKRMLEY 302

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  +  E                  ++ A+P +T+  +                  + 
Sbjct: 303 LNKGVDLDEMGRTFWRFVKHGIMPRLYIMLAVPTETVEDFTETQDMLHRMEDPPFMYMRF 362

Query: 208 TIEKGTLFYKMHKDGDLVLPSENV----AVDLYNLTQSITSAHGLHAY--EISNHSFLGA 261
               GT  Y      + + P E++       +Y  T+   S          IS+ +   A
Sbjct: 363 VPYPGTPLYNQLVQDNRIKPPESLGEWAKFSVYFATKGNLSELSDEVINQAISHWAHSYA 422

Query: 262 ES------LHNLNY 269
                    HN  Y
Sbjct: 423 SRRVMFTLRHNPRY 436


>gi|325849588|ref|ZP_08170826.1| iron-only hydrogenase maturation rSAM protein HydE [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480069|gb|EGC83146.1| iron-only hydrogenase maturation rSAM protein HydE [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 344

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 11/193 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +R+  +  E +  SF   +    ++       +    GG     + 
Sbjct: 54  FCKNNCYYCG----IRKSNLNVERYRLSFDEII-MCAKIGYKLGYRTFVLQGGEDLKFKD 108

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           ++I  I++ I K        +  I  +        ++ +  AG +R  L  ++  +    
Sbjct: 109 EDICKIVEEIKKIHP-----DCAITLSIGERSKEAYRSFFNAGADRYLLREETSNKNHYY 163

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L  +  +      A+   + I  ++    +   P Q       +L+       D + + 
Sbjct: 164 KLHPKEMSFENRRKALFDLKEIGFQVGGGFMVGSPYQKDEDLISDLRFLQELKPDMIGIG 223

Query: 206 QLTIEKGTLFYKM 218
               +  T F  M
Sbjct: 224 PYLSQHDTPFKDM 236


>gi|323138528|ref|ZP_08073596.1| RNA modification enzyme, MiaB family [Methylocystis sp. ATCC 49242]
 gi|322396162|gb|EFX98695.1| RNA modification enzyme, MiaB family [Methylocystis sp. ATCC 49242]
          Length = 482

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 75/229 (32%), Gaps = 18/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C                +   + E + +    G R I+    G    +     
Sbjct: 194 CDKFCSFC---VVPYTRGAEVSRPVADIVAETRRLID-AGVREIT--LIGQNVNAYRGAD 247

Query: 88  N------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           +      +A +L  +A    V      T  ++P  +  +    +   G  +  + L VQS
Sbjct: 248 DKGREWGLARLLSHLADMDGVERLRYTT--SHPVDMAQDLIDAHESIGKLMPYVHLPVQS 305

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H  ++ +  I   R   P ++   D I   P +T   +E  +      
Sbjct: 306 GSDRILKTMNRRHTGADYLDIITRLRKARPDVAMSSDFIVGFPGETDADFEETMALVREV 365

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                  ++ +   GT   +     D     E +A     L +   + +
Sbjct: 366 GFASSFSFKYSPRPGTPGAERDDQIDEEAKRERLAALQALLEEQRQAFN 414


>gi|302344087|ref|YP_003808616.1| RNA modification enzyme, MiaB family [Desulfarculus baarsii DSM
           2075]
 gi|301640700|gb|ADK86022.1| RNA modification enzyme, MiaB family [Desulfarculus baarsii DSM
           2075]
          Length = 447

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 21/201 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C YC     V  Y  G+E    +    ++ +  L    +   +  G    S  +P 
Sbjct: 159 CDNFCSYC-----VVPYVRGREQSRPA-DQVLEEIAALVAAGAREVVLLGQNVDSYRDPG 212

Query: 87  -----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +  +  G+   W V       + ++P  +     +        + ++ L +QS
Sbjct: 213 RGIGFAELLRLAAGVEGLWRVR-----FLTSHPKDLSPELIETLAAEPKVMEQMHLPIQS 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L  + R +   + +A +   R   P ++   D+I   P ++   +   L+     
Sbjct: 268 GDDSVLAAMNRGYTTGQYLAKVEALRRAAPEVTLGGDIIVGFPGESADAFARTLELVERV 327

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D L  +  +    T   +M
Sbjct: 328 GYDTLFCFIYSDRPFTKASRM 348


>gi|293397289|ref|ZP_06641561.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Serratia odorifera DSM
           4582]
 gi|291420207|gb|EFE93464.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Serratia odorifera DSM
           4582]
          Length = 365

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 72/242 (29%), Gaps = 21/242 (8%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGG 78
           YV     C K C +C       R +              Q   Q     ++   ++    
Sbjct: 37  YVSIMEGCNKYCTFC--VVPYTRGEEVSRPSDDVLFEIAQLAAQGVREVNLLGQNVNAYR 94

Query: 79  GTP---SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
           G      +     +  ++  I        +      ++P     +    Y      V+ +
Sbjct: 95  GATYDGGVCSFAELLRLVAAIDGI-----DRIRFTTSHPIEFTDDIIAVYEDTPELVSFL 149

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMEL 191
            L VQS  ++ L  + R H A E  A I   R   P +  S D I   P ++   +E  +
Sbjct: 150 HLPVQSGSDRILTMMKRAHTALEYKAIIRKLRKARPNIQISSDFIIGFPGESQADFEQTM 209

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   D    +  +   GT    M  D       +     LY L + I       + 
Sbjct: 210 NLIAEVNFDTSFSFIYSSRPGTPAADMVDDVS----EDEKKQRLYILQERILQQAMRFSR 265

Query: 252 EI 253
           ++
Sbjct: 266 QM 267


>gi|254717992|ref|ZP_05179803.1| elongator protein 3 [Brucella sp. 83/13]
 gi|265982938|ref|ZP_06095673.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306839771|ref|ZP_07472572.1| MiaB-like tRNA modifying enzyme [Brucella sp. NF 2653]
 gi|264661530|gb|EEZ31791.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306405126|gb|EFM61404.1| MiaB-like tRNA modifying enzyme [Brucella sp. NF 2653]
          Length = 427

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  + +  +L  +     +  +   +IEA     + +  +     K  +  + L +
Sbjct: 204 PGNLRLGKLVKTVLAQVPDLQRLRLSSIDSIEA-----DDDLMEAIASEKRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   ++I      R + P + F  D+I   P +T   ++  L+   
Sbjct: 259 QAGDDMILKRMKRRHLRDDSIRFCQTVRALRPDIVFGADIIAGFPTETEEMFQNSLKIVE 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +  +GT   +M +
Sbjct: 319 ECGLTHLHVFPYSPREGTPAARMPQ 343


>gi|238065379|sp|A7H5G3|RIMO_CAMJD RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
          Length = 439

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   R K  Q N I      +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGRLKSRQINSI------IAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGTNSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEKLCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|319791713|ref|YP_004153353.1| tRNA-i(6)a37 thiotransferase enzyme miab [Variovorax paradoxus EPS]
 gi|315594176|gb|ADU35242.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus EPS]
          Length = 455

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   L E+  +    G R I+ +      + G    
Sbjct: 154 CSKYCSYC---VVPYTRGEEVNRPLDDVLVEIAGLADQ-GVREITLLGQNVNAYRGKMGD 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+++ +A+   +      T  ++P+       + Y K    V+ + L VQ  
Sbjct: 210 TAEIADFALLIEYVAEIPGIERIRYTT--SHPNEFTPRLIEAYAKVPQLVSHLHLPVQHG 267

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + +    A      +S D I   P +T   +   ++      
Sbjct: 268 SDRILMAMKRGYTAMEYKSTVRKLRAIRPDLALSSDFIVGFPGETDEDFAKMMKLIDDCQ 327

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 328 FDNSFSFIFSPRPGTPAAALH 348


>gi|291519876|emb|CBK75097.1| iron-only hydrogenase maturation protein HydE [Butyrivibrio
           fibrisolvens 16/4]
          Length = 352

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 68/195 (34%), Gaps = 17/195 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     E + +  + ++             ++   GG     + 
Sbjct: 65  YCKNDCFYCG----IRRDNRECERY-RLRMDDIISCADEGYKLGFRTVVLQGGEDLAFKD 119

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           Q+I  I+ GI          ++ +  +    + +++Q Y  AG +R  L  ++   +   
Sbjct: 120 QDICNIIKGIKAAHP-----DMVVTLSIGERDHDSYQAYFDAGADRYLLRHETANPELYA 174

Query: 147 FLGRNHNASEAI----AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              R H    +       +   +NI  ++    +   P QT     M+L+    +  D  
Sbjct: 175 ---RLHPGEMSFLHRMNCLQDLKNIGYQVGAGFMVQSPGQTAGDLAMDLKFIEEFKPDMC 231

Query: 203 SLYQLTIEKGTLFYK 217
            +      K T F K
Sbjct: 232 GIGPFISHKDTPFAK 246


>gi|83941259|ref|ZP_00953721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36]
 gi|83847079|gb|EAP84954.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36]
          Length = 439

 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 73/201 (36%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  LTE + + +  G R ++    ++    G    
Sbjct: 158 CDK---FCAFCVVPYTRGAEVSRPATRVLTEARELVER-GVREVTLLGQNVNAYHGVGEE 213

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +A ++  +AK   +      T  ++P+ ++      + +    +  + L VQS  
Sbjct: 214 GADYTLARLIKELAKIDGLERIRYTT--SHPNDMDDALIAAHGEIDKLMPYLHLPVQSGS 271

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R+H A   +  I   R   P +    D I   P++T   +E  ++       
Sbjct: 272 DRILKRMNRSHTAESYLRLIERIRAARPDIVMSGDFIVGFPEETDADFEATMELVREVKY 331

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            +   ++ +   GT   +  +
Sbjct: 332 GYAYSFKYSTRPGTPAAERPQ 352


>gi|317056657|ref|YP_004105124.1| RNA modification enzyme, MiaB family [Ruminococcus albus 7]
 gi|315448926|gb|ADU22490.1| RNA modification enzyme, MiaB family [Ruminococcus albus 7]
          Length = 465

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 87/253 (34%), Gaps = 32/253 (12%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
           +  + +MT    +    +V   + C   C YC     +  Y  G+E   +     +  ++
Sbjct: 164 TEIDESMTQLRDDKFRAFVPIMYGCNNFCTYC-----IVPYVRGRERS-RKPEAVLAEVK 217

Query: 64  QLT--GPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            L   G + I+ +      +  G P L+  ++I  I       +         + ++P  
Sbjct: 218 SLVEQGYKEITLLGQNVNSYAYGFPQLL--KDIDKIQGKFRIRF---------MSSHPKD 266

Query: 117 VEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
                       +     + L VQ+  ++ L+ + R +   + +  I  AR   P  SF 
Sbjct: 267 ATKELIDTIIDSEHICKHLHLPVQAGSDRVLKAMNRRYTTEKYLEMIDYARGRMPHFSFT 326

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSE 229
            DLI   P ++  ++            D++  +  +   GT   KM     D    L   
Sbjct: 327 TDLIVGFPGESYEEFCQTKDIIKRVKYDNIYSFVYSRRSGTPAAKMEDNISDKQKGLWLR 386

Query: 230 NVAVDLYNLTQSI 242
            + ++   +T   
Sbjct: 387 ELLLEQREITCEW 399


>gi|257063782|ref|YP_003143454.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Slackia
           heliotrinireducens DSM 20476]
 gi|256791435|gb|ACV22105.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Slackia
           heliotrinireducens DSM 20476]
          Length = 446

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 15/219 (6%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISS 73
           S     YV     C + C +C       RY     E    S    +       G   I+ 
Sbjct: 149 SGPAAAYVKISDGCNRFCSFCSIPYIRGRYHSFPYERIRASVEQCIA-----EGSVEITL 203

Query: 74  IFFGGGT-PSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
           I    G   S  E +   A +L  +A+           +   P  +              
Sbjct: 204 IGQDTGCWGSDFEEKSTTAQLLSNLAE--EFPDTWFRIMYVEPDGITDELLDAIAAHDNV 261

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQW 187
            + + + +Q    + L+ + R  +A E +  +   R   P ++    LI   P +T   +
Sbjct: 262 CDYLDMPLQHANPELLKSMRRKGSAPEFLKLLERIRTRVPGITLRTTLITGFPGETEEAF 321

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           +  ++       D++ ++  + E+GT  Y +    +  L
Sbjct: 322 DELMEFLEEADFDYVGVFPYSREEGTRAYDLPDQVEEEL 360


>gi|170759550|ref|YP_001787122.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A3
           str. Loch Maree]
 gi|229890489|sp|B1KSA4|MIAB_CLOBM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169406539|gb|ACA54950.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A3
           str. Loch Maree]
          Length = 450

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P  +  +  +   K      +I L VQS   + L+ + R+++  + +  +   + +
Sbjct: 247 MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKL 306

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            P +  S D+I   P +T   +E  L        D    +  +I KGT   K
Sbjct: 307 IPNVALSTDIIVGFPGETEKDFEETLSLVKEVEYDSAFTFLYSIRKGTPAAK 358


>gi|39997979|ref|NP_953930.1| B12 binding /radical SAM domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39984924|gb|AAR36280.1| B12-binding domain protein/radical SAM domain protein [Geobacter
           sulfurreducens PCA]
 gi|298506920|gb|ADI85643.1| anaerobic magnesium-protoporphyrin IX monomethyl ester oxidative
           cyclase-related enzyme [Geobacter sulfurreducens KN400]
          Length = 503

 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C +C     +   +  +    ++F+ E++ +  + G   +         P+  + Q
Sbjct: 206 CKQQCSFCS--QQLFWSQSWRARSAENFVAELEMLHTVHG---VQVAMLSDEIPTF-DRQ 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +    YR+ GV  I +GV++  +++L
Sbjct: 260 RWVRILDLMIERQV---PVKLLMETRVDDILRDADIMDRYREGGVEHIYVGVEAGTQETL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               ++    ++  AI L  N         +  +P  T       ++ A  Y  D     
Sbjct: 317 DLFKKDTQVEQSKQAIDLINNADIVSETSFVLGMPDDTPESIAQTIELAKHYNPDMAFFL 376

Query: 206 QLTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y           ++  +LV P            +                
Sbjct: 377 AIAPWPYAELYPQLEEYVATKDYRKYNLVEPVIKPKHMTLEELERQLGKASQQ------F 430

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
                ++LH L+ W+    + +
Sbjct: 431 FMHKFQNLHQLSAWKQEFMLSV 452


>gi|299139626|ref|ZP_07032800.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298598554|gb|EFI54718.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 497

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 98/301 (32%), Gaps = 44/301 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       ++ +     +       + M+QL     +  I+FG      +   
Sbjct: 215 CPYRCNWCAKPISGNKFHLRPAATVA------EEMKQLKREAGVQHIWFGDDVF-ALNQH 267

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +    + + K     + V   I++    +     Q  + AG   + +GV+S  +  L  
Sbjct: 268 WMQEFAEEVTKR---DAAVPFKIQSRADLMSEQTVQALKAAGCAEVWMGVESGSQTVLNA 324

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL--- 204
           + +  +    I A    +    R  F L    P +T T+ +  +        D + +   
Sbjct: 325 MDKGLSLPAVIVARRRLKVAGIRACFFLQLGYPGETWTELQETIDFVRETRPDDIGVSFS 384

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           Y L    GT+FY+                   N T S        A   ++   +  ++L
Sbjct: 385 YPL---PGTVFYERV---------RTQLGQKRNWTDSDDLCIMFRAAYTTDFYRVVRDAL 432

Query: 265 H-NLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSS 323
           H  +  WR  +                  V+   E H ++  + V +      + E LS 
Sbjct: 433 HAEVASWRESE------------------VSSETEAHIDALWRRVDELESVSRDAEALSP 474

Query: 324 E 324
           E
Sbjct: 475 E 475


>gi|206559304|ref|YP_002230065.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           cenocepacia J2315]
 gi|229890458|sp|B4EBG2|MIAB_BURCJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|198035342|emb|CAR51217.1| putative tRNA thiotransferase protein MiaB [Burkholderia
           cenocepacia J2315]
          Length = 457

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    +
Sbjct: 331 GYDTSFSFIYSPRPGTPAANL 351


>gi|15613914|ref|NP_242217.1| hypothetical protein BH1351 [Bacillus halodurans C-125]
 gi|10173967|dbj|BAB05070.1| BH1351 [Bacillus halodurans C-125]
          Length = 448

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 82/233 (35%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + + + Q      + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKEVIKQAEQLVQAGYKEIVLTGIHTGGYGEDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++A +L+ + +   +      +IEA+   +     +   ++   V  + + +QS  +  L
Sbjct: 210 SLARLLEDLEQVNGLKRIRISSIEAS--QLTDEVIEVIDRSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +     +   R       ++ D+I   P +T  +++        +    L 
Sbjct: 268 KRMRRKYTMAFFAERLERLREALPGLAVTSDVIVGFPGETEAEFQETYDFIAKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    +  + +E V   +     L +   S       E+
Sbjct: 328 VFPYSKRTGTPAARMEDQVNEDVKNERVHRLIQLSDQLAKEYASQFEGEVLEM 380


>gi|310779080|ref|YP_003967413.1| SSU ribosomal protein S12P methylthiotransferase [Ilyobacter
           polytropus DSM 2926]
 gi|309748403|gb|ADO83065.1| SSU ribosomal protein S12P methylthiotransferase [Ilyobacter
           polytropus DSM 2926]
          Length = 448

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 86/242 (35%), Gaps = 25/242 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----FFGGGTPSL 83
           C ++C YC      +     +   I+  + E Q +    G R I+ +       G    L
Sbjct: 155 CNRRCTYC---IIPKLRGDLRSRNIEDIVEEAQRLAA-GGVREINLLAQETTEYGID--L 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            + + +  ++  ++K   +       +   P+S+     +  +K     N   + VQ + 
Sbjct: 209 YKKKALPDVMKALSKVEGIEWIRTYYM--FPNSITDELIETMKKEEKVCNYFDVPVQHVS 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  LR +GR     +    ++  R   P  +    +I   P +T   +    +    +  
Sbjct: 267 DSVLRNMGRAKTGQQIKDLLYKIRREIPDATIRTTVIVGFPGETEEDFIELKEFVKEFKF 326

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D++ +++ + E+ T+ + M +  D  +                 +       EI N  F+
Sbjct: 327 DYVGVFKYSREEDTVAHDMDEQIDEEVKHRRWME---------LTNLQSEIAEIKNREFI 377

Query: 260 GA 261
           G 
Sbjct: 378 GK 379


>gi|302390783|ref|YP_003826604.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
 gi|302201411|gb|ADL08981.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
          Length = 426

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 11/199 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C K C YC     +RR       +  +    ++   ++      + I   G  P     
Sbjct: 151 YCRKNCNYCG----LRRANTSLLRYRMTPEEIIKAAVEMRKLGLSTVILQSGEDP-WYTE 205

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  IL GI     +   + ++I   P        + +RKAG N   L ++S   +  +
Sbjct: 206 EKMVEILRGIKSETGM--RITMSIGERPRH----ELEAFRKAGANNYLLRIESANREVFK 259

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
               + +    +  I   + +        I  LP Q       ++       ++ + L  
Sbjct: 260 LAHPDDDYDVRVKNIRDLKELGYVTGSGCIVGLPGQRPEHLAEDIVFLRDMGINMVGLGP 319

Query: 207 LTIEKGTLFYKMHKDGDLV 225
               + T F  +     L+
Sbjct: 320 FLPARNTPFENLPPGDLLM 338


>gi|257092865|ref|YP_003166506.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045389|gb|ACV34577.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 455

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---------SSIFFGG 78
           C K C +C       R +     F            Q     ++          ++   G
Sbjct: 157 CSKFCSFC--IVPYTRGEEVSRPFDDVLTEVAGLAAQGVREVTLLGQNVNAYRGAMSGVG 214

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
             P+  E  ++AL+++ IA+   +      T  ++P  V       Y +    V+ + L 
Sbjct: 215 QAPAGDEAADLALLIEYIAEIPGIERIRYTT--SHPREVSQRLIDIYARVPKLVSHLHLP 272

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L  + R + A E  + +   R   P +S   D I   P +T   +E  ++  
Sbjct: 273 VQSGSDRVLAAMKRGYTAIEYKSLVRKLRAARPDLSLSSDFIVGFPGETADDFEKTMKLI 332

Query: 195 LSYAVDHLSLYQLTIEKGTL 214
                D    +  +   GT 
Sbjct: 333 DDVGFDASFSFLYSSRPGTP 352


>gi|224369269|ref|YP_002603433.1| MiaB [Desulfobacterium autotrophicum HRM2]
 gi|223691986|gb|ACN15269.1| MiaB [Desulfobacterium autotrophicum HRM2]
          Length = 460

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +    +S + E+  +    G + ++ +  G    S  + +
Sbjct: 169 CDNFCTYC---VVPYVRGRERSRTPESIVEEISILAD-AGVKEVTLL--GQNVNSYGQKE 222

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I    D + +   VS    I     +P  +  +     R      N++ L VQS   + 
Sbjct: 223 QICSFSDLLEQISRVSGIERIRFATSHPKDLSDDLIYAIRDIDKVCNQLHLPVQSGSNRI 282

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   + +  +   R   P +  S D+I   P +T   ++  +        D +
Sbjct: 283 LKKMNRGYTKEQYLERVGKLRKNCPSIALSSDMIIGFPSETRADFDETMDLVRRVEFDGI 342

Query: 203 SLYQLTIEK 211
             +  +   
Sbjct: 343 FAFAYSDRP 351


>gi|327539767|gb|EGF26370.1| SSU ribosomal protein S12P methylthiotransferase [Rhodopirellula
           baltica WH47]
          Length = 476

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 70/243 (28%), Gaps = 29/243 (11%)

Query: 28  CVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C +C       + +    E  I           +  G   +  +       +    
Sbjct: 186 CDRLCTFCAIPKMRGKHFSKPIEQIIDE--------AKRLGDSGVREVVIVAQDTTYYGM 237

Query: 87  QN-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +  +L  + K  ++     +     P  ++         A   V  I + +Q 
Sbjct: 238 DRYGEPRLNQLLKELDKIESIDWIRLMYF--YPMYIDDALIDTLASAKRIVPYIDMPLQH 295

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R    S     +   R+    +     +I   P +T   +   +      
Sbjct: 296 ASDKMLKRMARKTTRSLQTDIVQKLRSRIDSLVMRTTMITGFPGETEEDFVELMDFVQES 355

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             ++L ++  +IE+ T   ++    D       VA    +    +            N S
Sbjct: 356 RFENLGVFTYSIEEDTPAARLPNRVD-----PEVAARRRDDLMELQQQIAFDW----NDS 406

Query: 258 FLG 260
            +G
Sbjct: 407 RVG 409


>gi|306821117|ref|ZP_07454733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550810|gb|EFM38785.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 475

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-------GGGT 80
           C   C YC     +  +  G+E        ++    +L    ++  I          G  
Sbjct: 194 CNNFCTYC-----IVPFTRGRER--SRLPKDILDEVKLLAQNNVKEITLLGQNVNSYGNN 246

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +  +  +  ++L+ I K   +       + ++P  +     + + +     + + L VQ
Sbjct: 247 FT--DKYSFPMLLEDINKVDNIRRIRF--MTSHPKDISDELIESFGRLDKLCDYLHLPVQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           +  +  L+ + R + A + +  I   + + P ++   D+I   P +T   ++  L+    
Sbjct: 303 AGSDSVLKRMNRKYTAYDYMKKIEKIKKVVPDIALTTDIIVGFPGETEEDFQQTLKIVKE 362

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              D   ++  +  KGT   KM    D
Sbjct: 363 VEYDSAFMFMYSTRKGTAAEKMEDHID 389


>gi|42783938|ref|NP_981185.1| hypothetical protein BCE_4892 [Bacillus cereus ATCC 10987]
 gi|42739868|gb|AAS43793.1| conserved hypothetical protein TIGR01212 [Bacillus cereus ATCC
           10987]
          Length = 319

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 23/212 (10%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAGVNR 132
            +F   T +      +    + +     V   ++    +  P  V V       K     
Sbjct: 96  -YFQAYTNTHAPLDVLKEKFEPLLAEKDVVGLSIATRSDCLPDDV-VEYLADLNKRTYLW 153

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +         +
Sbjct: 154 VELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAR 213

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                 V  + ++ L + KGT   K ++ G L
Sbjct: 214 EVAKLDVQGIKIHLLHLLKGTPMVKQYEKGQL 245


>gi|260431873|ref|ZP_05785844.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415701|gb|EEX08960.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 418

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 25/207 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           +   P     +  IL  +     +  +   +IE     V+ N  Q        +  + L 
Sbjct: 202 A--SPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLS 254

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H   +AI     AR + P ++F  D+I   P +T   +E  L+  
Sbjct: 255 LQHGDDLILKRMKRRHLRDDAIRFTEEARKLRPEITFGADIIAGFPTETEAHFENSLKLV 314

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKD 221
               +  L ++  +  +GT   ++ + 
Sbjct: 315 TDCDLTWLHVFPYSKREGTPAARIPQQ 341


>gi|229890696|sp|Q39D51|MIAB_BURS3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 457

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 213 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|269792240|ref|YP_003317144.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099875|gb|ACZ18862.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 439

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 79/202 (39%), Gaps = 14/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     V + +    +  + F   +  +R L    ++  +  G        + 
Sbjct: 153 CSRGCTYC----IVPKLRGPSIS--RPFQEVLSEVRSLVESGALEVVLTGVHLGDYRWDG 206

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
            ++A ++  ++    +      +IE  P  +     +     ++ +  + + +QS ++Q 
Sbjct: 207 LDLADLVRALSSVEGLGRIRFGSIE--PFGLSQRLLEALGGSRSFMPHLHVPLQSGDDQV 264

Query: 145 LRFLGRNHNASEAIAAIHLARNI---FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           LR +GR +  S+ +  +  AR +      +S D++   P +    ++  L+      V  
Sbjct: 265 LRRMGRGYGGSDYVEMVRRARQVLGDDLHVSADVMVGFPGEDQVAFDNTLRVLEEARVGR 324

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           L ++  +   GT  Y   +  D
Sbjct: 325 LHVFPYSPRPGTAAYHWPRPQD 346


>gi|78067490|ref|YP_370259.1| tRNA-i(6)A37 modification enzyme MiaB [Burkholderia sp. 383]
 gi|77968235|gb|ABB09615.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. 383]
          Length = 498

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 198 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALAA 253

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    VN + L VQ 
Sbjct: 254 GSSEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVNHLHLPVQH 311

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 312 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALVHEM 371

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 372 SYDTSFSFIYSPRPGTPAANLH 393


>gi|51892897|ref|YP_075588.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
           14863]
 gi|81388796|sp|Q67NJ9|MIAB_SYMTH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|51856586|dbj|BAD40744.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
           14863]
          Length = 470

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 22/205 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----------FG 77
           C K C YC       R K     +        +  RQ  G + I+ +           +G
Sbjct: 176 CDKHCTYC--IVPTTRGKERSRPYEVILAEVQELARQ--GFKEITLLGQNVNAYGKDLYG 231

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
                  +  ++  ++D   +N      +  T   +P        +   +A        L
Sbjct: 232 RHGEGAFDFGDLIELID---RNSPGIERIRFTTN-HPKDFTRKMVEQIARAEKVCEWFHL 287

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS  +  LR + R++N  + +  +   R + P   ++ D+I   P +T  +++  L  
Sbjct: 288 PVQSGSDSVLRRMKRSYNRKQYLRLVGWIRELIPDAVITTDIIVGFPGETEEEFQETLSL 347

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                 D   ++  +   GT   +M
Sbjct: 348 VEEVQYDAAFMFMYSERAGTPAAQM 372


>gi|312898000|ref|ZP_07757409.1| MiaB-like tRNA modifying enzyme [Megasphaera micronuciformis F0359]
 gi|310620925|gb|EFQ04476.1| MiaB-like tRNA modifying enzyme [Megasphaera micronuciformis F0359]
          Length = 438

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 22/202 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGG------T 80
           C   C YC            +     + + E + +        + + I  G         
Sbjct: 156 CNNFCAYC---IIPYTRGSLKSRQPDAVIEEAKRLSAAGFKEIVLTGIHLGAYGMDLPDR 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           P+L     +  +L           ++E         +  +  +    +      + L +Q
Sbjct: 213 PTL--ALVLKRLLAETDIARIRMGSIESV------EIGDDLVEAINSSSRICPHLHLPMQ 264

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R++   E I  I           +S DLI   P +T   ++  +     
Sbjct: 265 SGSDEILKSMKRHYTKEEYILLIEDLHKKIKDLTVSTDLILGFPGETDELFDETMDTLKR 324

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
               H+  +  +  +GT   +M
Sbjct: 325 LKFSHIHAFPYSPREGTPAAQM 346


>gi|209543460|ref|YP_002275689.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531137|gb|ACI51074.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 474

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 79/244 (32%), Gaps = 14/244 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C +   V  ++  +    +    E++  +Q               T  L   +
Sbjct: 207 CKSHCTFCLWPQTVGGHR-YRTRSPEHVAAEIRLAKQYFPQVKEFFFDDDTFTDDLPRAE 265

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  ++ G+  + +G +S  +Q L  
Sbjct: 266 AIAKELGKMGVTWSCNAKA---------NVPRKTLEVLKENGLRLLLVGYESGNQQILHN 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T    +  ++ A       L +   
Sbjct: 317 IKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFATEINPHTLQVSLA 376

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
               GT  +K   +   +  S    +D   +  +      L   EI N    G E  +  
Sbjct: 377 APYPGTFLHKQATENGWLDESNAELIDENGVQMAPLHYPHLSHSEIFN----GVEEFYRK 432

Query: 268 NYWR 271
            Y+R
Sbjct: 433 FYFR 436


>gi|306821073|ref|ZP_07454691.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550909|gb|EFM38882.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 452

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 59/181 (32%), Gaps = 33/181 (18%)

Query: 45  KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS 104
              +++FIQ  ++ +  + +++  + I  +  G   P +I    +  +            
Sbjct: 219 HSQKDDFIQEDISLIDVIEEVSKIKDIHRVRIGSVEPIIISDDFLQRLTKIEKFCPHF-- 276

Query: 105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
                                         L +QS  + +LR + R +   E   A+   
Sbjct: 277 -----------------------------HLSLQSGCDDTLRRMNRRYTTDEYKNAVLKI 307

Query: 165 RNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           R  F    ++ D+I   P +T  ++E          +  + ++  +   GT  Y M    
Sbjct: 308 RQYFDSPAITTDIITGFPGETQEEFEKTYSYLRDINLYEMHIFPFSRRSGTKAYDMKNQI 367

Query: 223 D 223
           D
Sbjct: 368 D 368


>gi|45361233|ref|NP_989194.1| CDK5 regulatory subunit-associated protein 1-like 1 [Xenopus
           (Silurana) tropicalis]
 gi|82186429|sp|Q6P4Y0|CDKAL_XENTR RecName: Full=CDK5 regulatory subunit-associated protein 1-like 1
 gi|38649005|gb|AAH63205.1| CDK5 regulatory subunit associated protein 1-like 1 [Xenopus
           (Silurana) tropicalis]
          Length = 553

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 83/253 (32%), Gaps = 30/253 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        E  +       Q         S  +  +G    + + 
Sbjct: 210 CLNACTYCK-TKHARGELASYPVEELVDRAAQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 267

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 268 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 321

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  L+    Y 
Sbjct: 322 SDSVLMDMKREYCIADFKRVVDFLKERVPGITIATDIICGFPGETDEDFKETLKLVEEYK 381

Query: 199 VDHLSLYQLTIEKGTLFYKM---------HKDGDLVLPSENVAVDLYNLTQS----ITSA 245
              L + Q     GT   KM          +  +L     + +   + + +     +T  
Sbjct: 382 FPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFHSYSPYDHKIGEEQHVLVTEE 441

Query: 246 HGLHAYEISNHSF 258
                Y +S++ F
Sbjct: 442 SFDSQYYVSHNRF 454


>gi|299138054|ref|ZP_07031234.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599984|gb|EFI56142.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 469

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 54/201 (26%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC +C  +    +    ++    +      +          S               
Sbjct: 209 CPYKCRWCS-HQVYGQTHRRRDPLKVVDELEFLLHEYTPDIAWISDDVFTINH------- 260

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +      G  +   +    E    +    +         + G  RI +G +S  ++ L
Sbjct: 261 --DWIRKYAGEMRRRNIHIPFECI--SRADRLNEEMLDLLAELGCFRIWIGSESGSQRLL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + R     +   AI   R    +    L++    + M   E  +        D     
Sbjct: 317 DSMDRGVKVEQVQRAIEQTRARNIQSGMFLMWGYEGEEMEDIEATIHHVSKSKPDIFFTT 376

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
                KGT +Y+  +   + L
Sbjct: 377 VSYPIKGTPYYQQIQSKLVQL 397


>gi|291280234|ref|YP_003497069.1| hypothetical protein DEFDS_1859 [Deferribacter desulfuricans SSM1]
 gi|290754936|dbj|BAI81313.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 411

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-SSIFFGGGTPSLIEP 86
           C   C YC            +   I+  + E+  +  L     +   I  G     +   
Sbjct: 135 CDAFCTYC---IIPFLRGKPKSKPIEKVIKEIDDLVNLNYKEIVLVGIHIGKYG--IDHN 189

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQ 143
             +  +L  I K +   +        +   ++         +     N   + +Q+   +
Sbjct: 190 TTLKNLLKEIIKQYQNKNIRFRLSSLDVDEIDDELIDIVEHSNGLICNHFHIALQNGSNK 249

Query: 144 SLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H A + I   +  ++      +  D+I   P++T   +E  +       VD+
Sbjct: 250 ILQLMKRRHTAEDFIDICNKIKSKIADCTIGTDVIVGFPEETDEDFESTINVLNKANVDY 309

Query: 202 LSLYQLTIEKGTLFYKM 218
           L ++  +  +GTL  KM
Sbjct: 310 LHVFSYSKREGTLASKM 326


>gi|32476670|ref|NP_869664.1| 2-methylthioadenine synthetase [Rhodopirellula baltica SH 1]
 gi|81659389|sp|Q7UK39|RIMO_RHOBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|32447216|emb|CAD77042.1| conserved hypothetical protein-putative 2-methylthioadenine
           synthetase [Rhodopirellula baltica SH 1]
          Length = 477

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 70/243 (28%), Gaps = 29/243 (11%)

Query: 28  CVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C +C       + +    E  I           +  G   +  +       +    
Sbjct: 187 CDRLCTFCAIPKMRGKHFSKPIEQIIDE--------AKRLGDSGVREVVIVAQDTTYYGM 238

Query: 87  QN-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +  +L  + K  ++     +     P  ++         A   V  I + +Q 
Sbjct: 239 DRYGEPRLNQLLKELDKIESIDWIRLMYF--YPMYIDDALIDTLASARRIVPYIDMPLQH 296

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R    S     +   R+    +     +I   P +T   +   +      
Sbjct: 297 ASDKMLKRMARKTTRSLQTDIVQKLRSRIDSLVMRTTMITGFPGETEEDFVELMDFVQES 356

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
             ++L ++  +IE+ T   ++    D       VA    +    +            N S
Sbjct: 357 RFENLGVFTYSIEEDTPAARLPNRVD-----PEVAARRRDDLMELQQQIAFDW----NDS 407

Query: 258 FLG 260
            +G
Sbjct: 408 RVG 410


>gi|115522348|ref|YP_779259.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris BisA53]
 gi|115516295|gb|ABJ04279.1| MiaB-like tRNA modifying enzyme [Rhodopseudomonas palustris BisA53]
          Length = 421

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C +C   F     R          +++          LTG    S      G PSL
Sbjct: 152 CDHRCTFCIIPFGRGPSRSLPPGAVIEQVRTLAARGHAEIVLTGVDLTSYGCDLSGAPSL 211

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRISLGVQS 139
                  LIL  + +   +  +   +IEA+   ++     +         +  + L +QS
Sbjct: 212 --GALTKLILREVPELRRLRLSSIDSIEADRDLLDAVANEDRL-------MPHLHLSLQS 262

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H+ ++++A     R + P +    DLI   P +T   +   L      
Sbjct: 263 GDDLILKRMKRRHSRADSVALCAELRRLRPDIVLGADLIAGFPTETDAAFTRSLDLIEDC 322

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            +  L ++  +   GT   KM  
Sbjct: 323 GLSLLHVFPYSPRPGTPAAKMPP 345


>gi|320107803|ref|YP_004183393.1| Radical SAM domain-containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319926324|gb|ADV83399.1| Radical SAM domain protein [Terriglobus saanensis SP1PR4]
          Length = 497

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 19/245 (7%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C++ +              +   EM+ +++      +  I+FG    +L    N  
Sbjct: 215 CPFRCNWCAKPISGNRFHLRAASAVAEEMELLKRAG----VEHIWFGDDIFAL----NRH 266

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            + +   +    ++ V   +++    +        + AG   + +GV+S  +  L  + +
Sbjct: 267 WVKEFAEEVTKRNAAVPFKVQSRADLMGEETVLHLKTAGCAEVWMGVESGAQTILDAMDK 326

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
           +      +A+    +    R  F L +  P +T  + +  +        D + +      
Sbjct: 327 DITLDAIVASRERLKAAGIRACFFLQFGYPGETWVELQQTIALVRKLRPDDIGISFSYPL 386

Query: 211 KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH-NLNY 269
            GT FY+  +                N   S        A   ++      E+LH  ++ 
Sbjct: 387 PGTAFYERVQM---------QLGAKRNWADSDDLCIMFRAAYTTDFYRAVREALHAEVDS 437

Query: 270 WRYGD 274
           WR  D
Sbjct: 438 WRVAD 442


>gi|260655525|ref|ZP_05861013.1| tRNA-I(6)A37 modification enzyme MiaB [Jonquetella anthropi E3_33
           E1]
 gi|260629973|gb|EEX48167.1| tRNA-I(6)A37 modification enzyme MiaB [Jonquetella anthropi E3_33
           E1]
          Length = 453

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 21/206 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-----ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC     V   +        E  +      ++  R       +    +G     
Sbjct: 164 CDCRCSYC----IVPSLRGPSVSRPLERTVAEARRLVEAGRTELVLTGVHLGQWGKE--- 216

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSL 140
               + +A +++ +     +      ++E  P  ++  +        V    + L +QS 
Sbjct: 217 --SGRGLADLIEAVGNVPGLKRLRLGSLE--PFGIDERDIDAMASLTVFAPHLHLPLQSG 272

Query: 141 EEQSLRFLGRNHNASEAIAAIH---LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++  LR + R   + + +  +     A      +S D++ A P +T   +   L+     
Sbjct: 273 DDGVLRRMRRPGTSGQFLELVKKLRRALGDGLHVSTDVMVAFPGETDEAFARTLEVLQEA 332

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +  +  +  +I  GT   +     D
Sbjct: 333 RIGRVHGFIFSIRPGTPAARFPDQVD 358


>gi|255524216|ref|ZP_05391175.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans
           P7]
 gi|296185337|ref|ZP_06853747.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           carboxidivorans P7]
 gi|255512041|gb|EET88322.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans
           P7]
 gi|296050171|gb|EFG89595.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           carboxidivorans P7]
          Length = 446

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 74/245 (30%), Gaps = 22/245 (8%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y+     C   C YC     + + +     +    +  +    Q    + +  I      
Sbjct: 150 YIRIAEGCNNFCTYC----IIPKIRGK---YRSRSMENIIKEAQSLAQQGVKEIILVAQD 202

Query: 81  PS-----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
            +     +   + ++ ++  ++K   +       +   P  +                 +
Sbjct: 203 TTRYGTDIYGKKALSELIRKLSKIENIHWIR--ILYCYPEEITEELIDEIATNTKVCKYL 260

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            + +Q +    L+ +GR     E +  I+  R     +     +I   P +T   ++   
Sbjct: 261 DIPLQHISNNILKAMGRRGTKEEILNNINKLREKVKNIVLRTSIIVGFPGETEEDFQELK 320

Query: 192 QRALSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                  +D L +++ + E GT          +       E +      +++ I S    
Sbjct: 321 DFIKDEKLDKLGVFKYSREDGTPAALMKNQIDEKVKESREEELMSIQQEISKQINSNKIG 380

Query: 249 HAYEI 253
             YE+
Sbjct: 381 RVYEV 385


>gi|189426449|ref|YP_001953626.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422708|gb|ACD97106.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 484

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 73/236 (30%), Gaps = 21/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C  N  ++ +   +     F+ + +  +     +   + +  +       S +
Sbjct: 221 CPYRCTFCSNNQLIQTHNPYRRHSVAFVAAMIKGLHDRYAINHFKFLDEL-------SFL 273

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              ++  +LD +       +   I         ++      + AG  R+   ++S   + 
Sbjct: 274 NKSDVVQLLDELDTMGLKITIEAICRVGLFGDNDLALVNRMKAAGFTRLFYSLESGSPRI 333

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-------- 196
           L  + +  +  E  A   +          ++I   P +T           L         
Sbjct: 334 LELMNKQISVEEFSAQKRVLDAAGISSGTNVIVGYPTETAEDIARTFTVCLENRILPSVC 393

Query: 197 --YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               +    +Y   I  G +  +     D+    + + V++  LT     +  L+ 
Sbjct: 394 FLLPIPGSEIYDRAIRDGYIKDEKEYVLDIGE-QQYLKVNMSQLTDDELYSCTLNH 448


>gi|153871438|ref|ZP_02000608.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Beggiatoa sp. PS]
 gi|152072092|gb|EDN69388.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Beggiatoa sp. PS]
          Length = 190

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
           V+ + L VQS  ++ L  + R H   E    +   R + P +S   D I   P +T   +
Sbjct: 5   VSHLHLPVQSGSDRILSLMKRGHTILEYKQKVRRLREVRPDISLSSDFIIGFPGETEADF 64

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           +  +Q       DH   +  +   GT    M     L +  + +A     LT+
Sbjct: 65  QATMQLIEELRFDHSFSFMYSPRPGTAAVTMPNQVPLEIKKQRLAQLQARLTE 117


>gi|13542169|ref|NP_111857.1| 2-methylthioadenine synthetase [Thermoplasma volcanium GSS1]
 gi|14325601|dbj|BAB60504.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 401

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 18/226 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C  KC +C   SH+ R K+     +     ++    ++   R I  I       
Sbjct: 117 IPINQGCTGKCNFC--VSHIARGKL-----VSRKPEKIAGQIKILLQRGIKEIKITSLDT 169

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLG 136
           +         +   I     +  +  + +        +        A         + L 
Sbjct: 170 AAYGKDIGLRLPHLIRTITEIGDDFRLRVGMMEPKNTLEIVDDLISAYRSEKVFKFLHLP 229

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRA 194
           VQS ++  L  + R +  S+ I      R  FP   +S DLI     +    +E  +Q  
Sbjct: 230 VQSGDDYVLEVMNREYTVSDFIRITGKFREAFPDSTLSTDLIIGYYAENDDSFEKTVQLI 289

Query: 195 LSYAVDHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLT 239
                + +++ + +  + T  F K  K  +++   + +  D++   
Sbjct: 290 EKIRPEIINVTKFSPRELTADFEKRPKPTNILKEQDRMIADMHKEI 335


>gi|303232268|ref|ZP_07318967.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
 gi|302481678|gb|EFL44739.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
          Length = 449

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 76/237 (32%), Gaps = 32/237 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSI--------FFGG 78
           C  +C +C     V + +       +   +++++  +       + +          + G
Sbjct: 173 CNNRCSFC----IVWKARGPACSADVDEIISQVRATQAHGAHEVVLTGINLGDYRYEYKG 228

Query: 79  GT---PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--- 132
                P L+       I+   +      S++E      P  +          +       
Sbjct: 229 SRLRLPGLLS-----EIMKQTSIERIRLSSIE------PPDITDELLDVIAGSEGRIAQF 277

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + + +QS  + +LR + RN+  +   +A+  AR+  P ++   DLI   P +T  ++   
Sbjct: 278 LHICLQSGCDATLRRMKRNYTTAFYRSAVERARDRMPHVALGTDLIVGFPGETDDEFATS 337

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +         + +++ +   GT         D  + +           Q   +   
Sbjct: 338 YKFCKDIGFAKMHIFRYSKRSGTPAATAEGQVDPHVMAARSRTMHELAAQMRYTQAQ 394


>gi|76809108|ref|YP_332302.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           pseudomallei 1710b]
 gi|254261221|ref|ZP_04952275.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1710a]
 gi|123600209|sp|Q3JVV1|MIAB_BURP1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|76578561|gb|ABA48036.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1710b]
 gi|254219910|gb|EET09294.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia pseudomallei
           1710a]
          Length = 457

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 67/201 (33%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C K C YC                +   LTE+  +    G R ++ +      + G    
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGAIAA 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSAEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLLDVYAKVPKLVDHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S ++I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTNIIVGFPGETDADFDKTMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
           + D    +  +   GT    +
Sbjct: 331 SYDTSFSFIYSPRPGTPAANL 351


>gi|189347647|ref|YP_001944176.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
           limicola DSM 245]
 gi|229890475|sp|B3EGT4|MIAB_CHLL2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|189341794|gb|ACD91197.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
          Length = 442

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V  +  G+E     F + +  +R L           G    S     
Sbjct: 157 CNNMCAFC-----VVPFTRGRERS-HPFGSVLDEVRALAESGCREITLLGQNVNSYHDSQ 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEE 142
              + + +LD +++    +     T  ++P  +  +  +    R    N + L VQS   
Sbjct: 211 SGADFSRLLDAVSREAPETRIRFTT--SHPKDMSHSLVETMASRPNICNHLHLPVQSGST 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H+  +    I L R   P +S   DLI     ++       L+       D
Sbjct: 269 RMLARMNRGHDIEDYRNKIELLRERIPGISLSTDLIAGFCGESDADHCQTLELMREVRFD 328

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
              ++  ++  GTL  +   
Sbjct: 329 SAFMFYYSVRPGTLAARTMP 348


>gi|332300096|ref|YP_004442017.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM
           20707]
 gi|332177159|gb|AEE12849.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM
           20707]
          Length = 454

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +      + +   I S + + + + +L G + I       G       +
Sbjct: 176 CNYYCTYC---TIPAARGISRNGSIASLVAQAERVAEL-GGKEIILTGVNIGDFGRTTGE 231

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
            +  +L  + +   ++     +IE  P  +     Q   +    +    + +QS  +Q L
Sbjct: 232 TLLELLHQLTQVAGIARYRIGSIE--PELLTPEIIQFVAETAQFMPHFHIPLQSGSDQVL 289

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R+++ +     + L   + P   +  D+I  +  +        L          L 
Sbjct: 290 RLMRRHYDTALFAERLKLIYELIPDAFVGIDVIAGMRGELSEHHAETLAFLKEQPWSQLH 349

Query: 204 LYQLTIEKGT 213
           ++  +  KGT
Sbjct: 350 VFPYSERKGT 359


>gi|310780493|ref|YP_003968825.1| biotin synthase [Ilyobacter polytropus DSM 2926]
 gi|309749816|gb|ADO84477.1| biotin synthase [Ilyobacter polytropus DSM 2926]
          Length = 321

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     +N+++  Y + +++ + S     + +         S      G+   
Sbjct: 59  CEEDCKFCAQSAHYNTNLTTYDLKEKDTLMSEYKRAEQLGSSKFGLVTSGRSIKKGS--- 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              +    I D +        N+   I  +   ++ N  +  +  GV R    +Q+    
Sbjct: 116 ---EEFDSIKDFVRDAK--EENINTNICCSIGLLDENELKELKDTGVTRFHSNMQTSISA 170

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + +   H   + +  I  A+ I   +    I  +  +T               VD + 
Sbjct: 171 YNKIVATTHKIDDRLETIKAAKKIGMEVCSGGIIGM-GETWEDRIDMAFTLKELEVDGIP 229

Query: 204 LYQLTIEKGTLFYKMHK 220
           +  L   +GT       
Sbjct: 230 INILNPIEGTPLGDREH 246


>gi|317154020|ref|YP_004122068.1| RNA modification enzyme, MiaB family [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944271|gb|ADU63322.1| RNA modification enzyme, MiaB family [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 447

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 67/204 (32%), Gaps = 20/204 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC     V + +        +  +   +  +    +      I+   +G G   
Sbjct: 151 CSHHCTYC----IVPQTRGPSVSRPVDAVVAEAVRLLDSGFRELVISGINLRHYGRG--- 203

Query: 83  LIEPQNIALILDGIAK--NWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGV 137
           L +  +   +L  + +      +    + +    P  ++         +     ++ L +
Sbjct: 204 LQDRTDFWDLLARLDRELAPRWAGRARLRVSSVEPGQLDHKALDTLAGSSMVCPQLHLSL 263

Query: 138 QSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           QS +   LR +GR H +   A+  +      +P +    DLI   P +    +E  L   
Sbjct: 264 QSGDPDVLRAMGRGHYDPQGAVDFLIRLGEAWPVIGLGADLITGFPGEDEAGFENTLTLC 323

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
               + +  ++  +   GT    M
Sbjct: 324 RVLPLTYAHVFPYSERPGTAAATM 347


>gi|253580177|ref|ZP_04857444.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848696|gb|EES76659.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 308

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 70/225 (31%), Gaps = 13/225 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISS--IFFGGGTPSLIEPQN 88
           C +C              +   S   +++  +  L+  R I     +F   T +    + 
Sbjct: 47  CIFCS----AGGSGDFAADAALSITDQIESQISILSQKRPIHKYIAYFQAYTNTYAPVEY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I      +  +   V ++I   P  +         +   ++   I LG+Q++ E + 
Sbjct: 103 LEKIFTEAISHPKI---VALSIGTRPDCLSPEIVTLLSRLNKHKPVWIELGLQTIHESTA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R++ R +       A+   R     +    I  LP +        ++      +  + L 
Sbjct: 160 RYIRRGYPLCVFDDAVKRLRKENIEVIVHTILGLPGENTADILETMEYLNHMDIQGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L + +GT     ++ G       +  + L            +  
Sbjct: 220 LLHVLRGTDLAADYEKGLFQTYERDEYISLLINCLEHLRPDMVIH 264


>gi|219670720|ref|YP_002461155.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219540980|gb|ACL22719.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 581

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  ++      +  E F Q     +++     G R+I  +         +  +
Sbjct: 185 CPFNCQYCLSSTFQGVRYLSPERFRQIMRQTLRY-----GARTIKLVD----RTFNVNKE 235

Query: 88  NIALILDGIAK---NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEE 142
           +   ILD   +   ++   + + +  E     ++       +    +  +  +GVQS   
Sbjct: 236 HALRILDIAREEAAHYPPEAGIRVHCEMAGELLDEEWLLYLQDYPQDLVQFEIGVQSTHP 295

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R  +       I   + +    +  DLI  LPK+    +            D 
Sbjct: 296 ETLAAIHRPQHFERWAKYIREMQRLNKAHLHLDLIAGLPKEGWESFRRSFNEVYDVQPDM 355

Query: 202 LSLYQLTIEKGTLFYKMHKDGDL 224
           L L  L + KG+   +   +  L
Sbjct: 356 LQLGFLKVLKGSGLREQRGEYGL 378


>gi|113474257|ref|YP_720318.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Trichodesmium
           erythraeum IMS101]
 gi|123057124|sp|Q119H9|MIAB_TRIEI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|110165305|gb|ABG49845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Trichodesmium erythraeum
           IMS101]
          Length = 451

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 77/223 (34%), Gaps = 16/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +   E+    +  + +  +V+  + C + C YC          V Q    ++   EM+ +
Sbjct: 132 IHIVEDITKPRRDSKITAWVNIIYGCNEHCTYC---VVPSVRGVEQSRTPEAIRAEMEEL 188

Query: 63  RQLTGPRSISSI-----FFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            +  G + I+ +      +G   P +  E +N     D +     V     I     +P 
Sbjct: 189 GRQ-GYQEITLLGQNIDAYGRDLPGVTKEGRNKYTFTDLLYYVHDVPGVERIRFATSHPR 247

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RM 171
                  +   +         +  QS + + L+ + R +   +    I   R + P   +
Sbjct: 248 YFTERLIRACAELPKVCEHFHIPFQSGDNKLLKAMARGYTHEKYRRIIDKIRELMPDASI 307

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           S D I   P +T  Q+E  L+       D L+    +   GT 
Sbjct: 308 SADAIVGFPGETEAQFENTLKLVEDIGFDQLNTAAYSPRPGTP 350


>gi|332359112|gb|EGJ36933.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis SK49]
          Length = 315

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFFKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQDEYVSIICDQLEIIPEHIVIH 266


>gi|325856357|ref|ZP_08172073.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A]
 gi|325483541|gb|EGC86513.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A]
          Length = 477

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S +++ +      G R I       G       +
Sbjct: 195 CSYFCTYC---TIPYARGFSRNPTIASLVSQAEEAAH-EGGREIVLTGVNIGDFGETTGE 250

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      ++E  P  ++          +A +    + +QS  ++ L
Sbjct: 251 RFLDLVKALDRVEGIRRYRISSLE--PDLIDDELIAYCAQSRAFMPHFHIPLQSGSDEVL 308

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     I L + + P   +  D++     + +  +E   +   S  V  L 
Sbjct: 309 KLMHRRYDTALFAHKIRLIKEMMPDAFIGVDVMVGSRGERLEYFEDCYRFLESLPVTQLH 368

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 369 VFPYSERPGT 378


>gi|227823742|ref|YP_002827715.1| MiaB-like tRNA modifying enzyme [Sinorhizobium fredii NGR234]
 gi|227342744|gb|ACP26962.1| MiaB-like tRNA modifying enzyme [Sinorhizobium fredii NGR234]
          Length = 404

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 28  CVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C +C     +         V     +      ++   +      + +  +G   P 
Sbjct: 127 CDHRCTFC----IIPYGRGNSRSVPMGAVVDQARRLVESGYREIVLTGVDATSYGADLPG 182

Query: 83  LIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                 +A  +L  +     +  +   +IEA+   ++           +  + L +Q  +
Sbjct: 183 TPTLGLLARTLLKQVPDILRLRLSSIDSIEADRHLLD---LIADEPRFMPHLHLSLQHGD 239

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H+++EA A     R + P +SF  D+I   P +T   ++   + A    +
Sbjct: 240 DLILKRMKRRHSSAEARAFCAEVRRLRPEISFGADMIAGFPTETEAMFDNAARLAEDCGI 299

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
            +L ++  +   GT   +M + 
Sbjct: 300 AYLHVFPYSPRPGTPAARMPQP 321


>gi|168182714|ref|ZP_02617378.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum Bf]
 gi|182674105|gb|EDT86066.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum Bf]
          Length = 559

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + + I+    E++++      +++  I F   T +     
Sbjct: 183 CPFKCKYC----LSSTLHGVRFHDIERVKKEIKFLV----DKNVKLIKFVDRTFNC---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
           N    +        + ++     E +   +     +   K    RI    GVQ+   + L
Sbjct: 231 NHKFAMGIWEYILNLDTDATFHFEISADLLTKEQLEILSKGKEGRIQFEVGVQTTNNEVL 290

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R+ N       +   +N+   +   DLI  LP +    ++       S   + + L
Sbjct: 291 KNINRHVNFETIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQL 350

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L + KG+      +         P   +        + + 
Sbjct: 351 GFLKLLKGSSMRLEAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|148555837|ref|YP_001263419.1| MiaB-like tRNA modifying enzyme [Sphingomonas wittichii RW1]
 gi|148501027|gb|ABQ69281.1| MiaB-like tRNA modifying enzyme [Sphingomonas wittichii RW1]
          Length = 419

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---------- 77
           C  +C +C     V  Y  G    + + +  +  ++ L        +  G          
Sbjct: 141 CDHRCTFC-----VIPYGRGNSRSVPAGI-VIDRIKALVDDGHAEVVLTGVDLTSYGPDL 194

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RIS 134
            G P+L   Q +  IL  +     +  +   +IE +      +               + 
Sbjct: 195 PGAPTL--GQLVERILTHVPGLRRLRLSSLDSIEID------DRLFALLTQEARMMPHVH 246

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +Q+ ++  L+ + R H+ ++A+A +   R   P ++   DLI   P +  T       
Sbjct: 247 LSLQAGDDLILKRMKRRHSRAQAVAMVERLRAARPEIAIGADLIAGFPTEDETMAANSAA 306

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                 +    ++  +   GT   +M +
Sbjct: 307 LIDDCDIVFGHVFPFSPRAGTPAARMPQ 334


>gi|121613708|ref|YP_001001103.1| putative tRNA modifying protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|238065318|sp|A1W162|RIMO_CAMJJ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|87249647|gb|EAQ72606.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni 81-176]
          Length = 439

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTTAFDM 335


>gi|330816070|ref|YP_004359775.1| Radical SAM domain protein [Burkholderia gladioli BSR3]
 gi|327368463|gb|AEA59819.1| Radical SAM domain protein [Burkholderia gladioli BSR3]
          Length = 480

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + +++ L E++W+R       +  
Sbjct: 199 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VENVLAEVKWIRDNMP--EVKE 255

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I F   T +  +P     + +       +        +AN         +  ++ G+  +
Sbjct: 256 IMFDDDTFTDFKP----RVEEIARGLGKLGVTWSCNAKANVPYAT---LKIMKENGLRLL 308

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       R +  ++    I  LP +T       ++ 
Sbjct: 309 LVGYESGDDQILLNIKKGLRTDIARRFNEDCRKLGIKIHGTFILGLPGETRDTIRKTIEY 368

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       + +       GT  Y+ 
Sbjct: 369 AKEINPHTIQVSLAAPYPGTRLYEQ 393


>gi|294782966|ref|ZP_06748292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
           1_1_41FAA]
 gi|294481607|gb|EFG29382.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
           1_1_41FAA]
          Length = 435

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVNKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +L+ I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLEEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILRKMGRGYTKEKYLALVDKIKSKIPDVALTADIIVGFPGETEEDFLDTVDVVEKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D+  ++  +I KGT    M    D
Sbjct: 326 DNSYMFMYSIRKGTKAATMDNQID 349


>gi|254994476|ref|ZP_05276666.1| hypothetical protein LmonocytoFSL_16947 [Listeria monocytogenes FSL
           J2-064]
          Length = 225

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 4/173 (2%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILD 94
           C F S            +     + Q +R     +                   +A + +
Sbjct: 54  CTFCSAAGSGDFAGNRALD-LKVQFQQVRDKMQTKWKDGKCIAYFQAFTNTHAPVAELRE 112

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFLGRN 151
                      V ++I   P  +  +  +   +        + LG+QS  +++ R + R 
Sbjct: 113 KFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQSAHDETGRLINRA 172

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           H+    +  +H  +    R+   +I  LPK+T        ++ +   VD + +
Sbjct: 173 HDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVESGVDGIKI 225


>gi|238019834|ref|ZP_04600260.1| hypothetical protein VEIDISOL_01710 [Veillonella dispar ATCC 17748]
 gi|237863358|gb|EEP64648.1| hypothetical protein VEIDISOL_01710 [Veillonella dispar ATCC 17748]
          Length = 378

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G     +  
Sbjct: 71  CIKNCNYCG----IRRENDKTERF-DMNREDIIKMAQWAYDHEYGSITLQSGE--RCDDA 123

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++D I     +  +  + I           ++  R+AG +R  L +++  ++    
Sbjct: 124 FVDYVVDLIRDIKAI-GDGSLGITMCVGEQSEEAYRRMREAGASRYLLRIETTNKELYHK 182

Query: 148 LGR---NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 183 IHPQDELHSFETRVECLRSLRRVGFQVGTGVMIGLPGQTEEDLVNDILFYRDMDIDMIGM 242

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 243 GPYVVHHDTPLGQ 255


>gi|297588452|ref|ZP_06947095.1| 2-methylthioadenine synthetase [Finegoldia magna ATCC 53516]
 gi|297573825|gb|EFH92546.1| 2-methylthioadenine synthetase [Finegoldia magna ATCC 53516]
          Length = 430

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-GTPSL--- 83
           C + C YC     +   +    +     + ++    +         I   G    S    
Sbjct: 152 CSQFCSYC----IIPYARGPIRS---RNIRDIVLEAKRLSDNGFKEIVLTGIHVASYGKD 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           ++  +I  ++D I     +     I + +  P  V+          +   +   L +QS 
Sbjct: 205 LDNNDIG-LIDVIEDIGQIDKIKRIRLSSLEPRIVDKQFLDRLSKVEQFCDHFHLSLQSG 263

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R ++       I+L R  +P   ++ D+I   P +T   +E  L       
Sbjct: 264 SDSILESMNRKYDTDLYEKTINLIREYYPNAAITTDIIVGFPGETDEDFEQTLSFVDKIQ 323

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + +++ +  KGT+  KM
Sbjct: 324 FSKIHVFKYSNRKGTVASKM 343


>gi|182412618|ref|YP_001817684.1| RNA modification protein [Opitutus terrae PB90-1]
 gi|177839832|gb|ACB74084.1| RNA modification enzyme, MiaB family [Opitutus terrae PB90-1]
          Length = 468

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 68/226 (30%), Gaps = 26/226 (11%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL----------I 84
           C F    +     +   +   + E + +    G R ++ +  G    S           I
Sbjct: 177 CAFCIVPKTRGDERSRPMDDIVRECEQLAAR-GVREVTLL--GQIVTSYGRRDYTHTNGI 233

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            P     +L+ +     +          +P   + +    Y +       + L +QS   
Sbjct: 234 SP--FVQLLERVHALDGIERIRF--TSPHPRGFKDDLVAAYGRLPKLCGYVHLPLQSGSN 289

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR + R +        +    A       S D+I   P +T   +E   +   +   D
Sbjct: 290 RILRAMNRPYTRERYREIVDALRAVRSDMYFSTDVIVGFPGETDEDFEQTRELFEACNYD 349

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +++ ++  GT   +           E+V      L   +   +
Sbjct: 350 MAYVFKYSVRTGTPAAERGDQV-----PEDVKEQRNQLLLELLRQN 390


>gi|148284718|ref|YP_001248808.1| MiaB-like tRNA modifying enzyme [Orientia tsutsugamushi str.
           Boryong]
 gi|146740157|emb|CAM80374.1| MiaB-like tRNA modifying enzyme [Orientia tsutsugamushi str.
           Boryong]
          Length = 423

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 33/213 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--------- 78
           C  +C +C     +  Y  G    +   +  +    QL   +    I F G         
Sbjct: 149 CNHRCTFC-----IIPYVRGNSRSVP--IGVITQQIQLLINQGYKEIVFTGVDLTSYGAD 201

Query: 79  --GTPSLIEPQNIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYRKAGVNR 132
             G+P+L   Q I  +L  +     +        EI  E      +           +  
Sbjct: 202 LPGSPTL--AQMIKRVLMLVPALPRLRLSSIDIAEIDQELFKLMTDEPRL-------MPH 252

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEME 190
             + +Q+ +   L+ + R H   + I   +  R I        D+I   P +T   +   
Sbjct: 253 FHISLQAGDNMILKRMKRRHTREQIIEFCNKMRKILPDASFGADMIAGFPTETEIMFNNS 312

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           L       + +L ++  +  + T   KM +   
Sbjct: 313 LNLISETGIQYLHVFPYSERENTPASKMPQVQK 345


>gi|148981402|ref|ZP_01816398.1| hypothetical protein VSWAT3_09558 [Vibrionales bacterium SWAT-3]
 gi|145960894|gb|EDK26224.1| hypothetical protein VSWAT3_09558 [Vibrionales bacterium SWAT-3]
          Length = 432

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 72/229 (31%), Gaps = 14/229 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT-PSLIEP 86
           C K C YC       R +              Q   Q     ++          P+    
Sbjct: 115 CSKYCTYC--VVPYTRGEEVSRPMDDVLFEVAQLAEQGVREVNLLGQNVNAYRGPT--HE 170

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +I    + +    ++     I     +P     +    Y      V+ + L VQS  ++
Sbjct: 171 GDICTFAELLRLVASIDGIDRIRFTTSHPLEFGDDIIAVYEDTPELVSFLHLPVQSGSDR 230

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H A E  + I   R   P +  S D I   P ++   ++  ++       D 
Sbjct: 231 ILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGESNQDFQDTMKLIKEVDFDM 290

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +  +   GT       D    +P +     LY L Q++ +    ++
Sbjct: 291 SFSFIFSPRPGTPAA----DYPCDVPEQEKKDRLYELQQTVNTQAMRYS 335


>gi|331014759|gb|EGH94815.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 442

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 74/231 (32%), Gaps = 15/231 (6%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-- 76
             YV     C K   YC F                  LTE+  + +  G R ++ +    
Sbjct: 148 SAYVSVMEGCSK---YCTFCVVPYTRGEEVSRPFDDVLTEVTHLAEH-GVREVTLLGQNV 203

Query: 77  -GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNR 132
            G    +      +A + D I     V     I     +P     +  Q +      V  
Sbjct: 204 NGYRCTT--HDGRVADLADLIRAVAVVDGIDRIRYTTSHPLEFSDSLIQAHADVPELVKH 261

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEME 190
           + L VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   ++  
Sbjct: 262 LHLPVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFDNT 321

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++       D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 322 MKLIEDAGFDFSFSFIYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|319946472|ref|ZP_08020709.1| TIGR01212 family radical SAM protein [Streptococcus australis ATCC
           700641]
 gi|319747440|gb|EFV99696.1| TIGR01212 family radical SAM protein [Streptococcus australis ATCC
           700641]
          Length = 313

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 12/206 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +    +++ +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HESVDV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +         +        I LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGMNIGTRPDCLPDETLAYLAELTKRMHVTIELGLQTTYEATSELI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVKRIRQQVPKAEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L +   T   + + +G L L S+  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLMSQEE 247


>gi|251773107|gb|EES53661.1| Radical SAM domain protein [Leptospirillum ferrodiazotrophum]
          Length = 483

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 70/190 (36%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +        V +   +++ L E+ ++++      I  +FF        +  
Sbjct: 211 CGSKCTFCLWP-QTFSGNVYRVRSVENVLQEVAYIKKTFP--QIKELFF--------DDD 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +    D   +      +  ++   N  ++V+ +  +  R +G   + +G +S  +  L 
Sbjct: 260 TLTEYRDRTRELSEGLKSFGLSWGCNSKANVDYDTLKIMRDSGCRVMVVGYESGNQTILN 319

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +A      A  +   +    +  LP +T    +  +  A    ++ L +  
Sbjct: 320 NVKKGIRVEQAEKFTRDAHQLGMTIHGTFMVGLPGETPETIDETISFASRLNIETLQVSL 379

Query: 207 LTIEKGTLFY 216
            +   GT FY
Sbjct: 380 ASPYPGTHFY 389


>gi|258654111|ref|YP_003203267.1| RNA modification enzyme, MiaB family [Nakamurella multipartita DSM
           44233]
 gi|258557336|gb|ACV80278.1| RNA modification enzyme, MiaB family [Nakamurella multipartita DSM
           44233]
          Length = 508

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 82/254 (32%), Gaps = 17/254 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++  +  +    +V     C   C +C     V   +  + +  +     +  +
Sbjct: 137 LEVFPSSLPAKRDSHYAGWVSISVGCNNTCTFC----IVPSLRGKEAD--RRPGDVLAEV 190

Query: 63  RQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPSSVE 118
           + L     +     G    S       +     +L        +          +P    
Sbjct: 191 QMLVDDGVLEVTLLGQNVNSYGVQFGDRQAFGKLLRACGAIDGLERVRF--TSPHPKDFT 248

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
            +  +   +     +++ + +QS  ++ L+ + R++ ++  +A +   R   P   ++ D
Sbjct: 249 PDVIEAMAQTPNVCHQLHMPLQSGSDRVLKAMRRSYRSTRYLAILDEVRAAMPDAAITTD 308

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +I   P +T   +E  L             +Q +   GT    +       + +E     
Sbjct: 309 IIVGFPGETDEDFEQTLDVVRRSRFAGAFTFQYSPRPGTPAATLPDQVPPEVVAERFGRL 368

Query: 235 LYNLTQSITSAHGL 248
              +T+S  + +  
Sbjct: 369 TEIVTESALTENQR 382


>gi|255655942|ref|ZP_05401351.1| putative radical SAM protein [Clostridium difficile QCD-23m63]
 gi|296450635|ref|ZP_06892388.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium difficile
           NAP08]
 gi|296879247|ref|ZP_06903242.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium difficile
           NAP07]
 gi|296260479|gb|EFH07321.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium difficile
           NAP08]
 gi|296429790|gb|EFH15642.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium difficile
           NAP07]
          Length = 478

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +    +  + E+ + +   T   ++          +L  P
Sbjct: 194 CNNFCTYC---IVPYTRGRERSRTPEDIINEIKELVANGTKEITLLGQNVDSYGKTLENP 250

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + + +L  +     +       + ++P  +        R        + L +Q      
Sbjct: 251 VSFSELLRKVNDIEGIERIRF--MTSHPKDISDEVIYAIRDCDKVCEFLHLPIQCGSSSL 308

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++     +  I  A+   P +  S DL+   P +T       L        D  
Sbjct: 309 LKKMNRHYTKEYYLEIIEKAKKEVPEIAFSTDLMIGFPGETEEDLLDTLDVVEKVRYDSA 368

Query: 203 SLYQLTIEKGTLFYKM 218
             +  +  +GT   KM
Sbjct: 369 FTFIYSKRQGTPAAKM 384


>gi|221369608|ref|YP_002520704.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodobacter
           sphaeroides KD131]
 gi|221162660|gb|ACM03631.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacter sphaeroides
           KD131]
          Length = 436

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    +    R +  I   G   +     
Sbjct: 158 CDKFCAFC-----VVPYTRGAE--VSRPFARLMAEARGLVERGVREITLLGQNVNAWSSD 210

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +A+   +      T  ++P+ +  +  + +      +  + L VQS  ++
Sbjct: 211 GRGLGGLIRELARIDGLERLRYTT--SHPNDMADDLIEAHGAEPKLMPYLHLPVQSGSDR 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H A   +  I   R   P +    D I   P +T   +E  L    +     
Sbjct: 269 ILKAMNRKHTAEHYLRLIERIRAARPDILLTSDFIVGFPGETEADFEATLDLIRAVGFGS 328

Query: 202 LSLYQLTIEKGTLFYKMH 219
              ++ +   GT   +  
Sbjct: 329 AFSFKYSARPGTPAAEKP 346


>gi|153952790|ref|YP_001393555.1| iron-sulfur protein [Clostridium kluyveri DSM 555]
 gi|219853455|ref|YP_002470577.1| hypothetical protein CKR_0112 [Clostridium kluyveri NBRC 12016]
 gi|146345671|gb|EDK32207.1| Conserved iron-sulfur protein [Clostridium kluyveri DSM 555]
 gi|219567179|dbj|BAH05163.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 306

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 74/217 (34%), Gaps = 19/217 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF     R     E F       ++ M      +     +F   T +   
Sbjct: 46  CIFCSERGSGDF--AGNRNLSITEQFY-----NIKKMMNKKWKQGKYIAYFQAYTNTYAP 98

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +    +       V   V + I   P  +E N  +   +        + LG+Q+  E
Sbjct: 99  IEILREKYEEAMSQEGV---VGMAIATRPDCLEANVLELLHEFNEKTYIWVELGLQTSNE 155

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + R + R +N      A++  R     +   +I  LP +  +     ++   +  +  +
Sbjct: 156 YTARKINRGYNLYTFEKAVYNLRKKNIDVVAHVIMGLPGENQSDMINTVKYISNQDIQGV 215

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             + L + K T   K++ +G L    +   VD+  + 
Sbjct: 216 KFHLLHLMKHTPMVKLYNEGKLKFMRQQEYVDIICMA 252


>gi|94263081|ref|ZP_01286900.1| MiaB-like tRNA modifying enzyme [delta proteobacterium MLMS-1]
 gi|93456624|gb|EAT06732.1| MiaB-like tRNA modifying enzyme [delta proteobacterium MLMS-1]
          Length = 470

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 10/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC     V R +    + + +  L + +         ++ +    G     + P
Sbjct: 161 CSQACSYC----IVPRARGRSRSVLPERVLRQAEIFAAAGHREAVLTGIHLGHYGRDLTP 216

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               L L        +            + +  +           +  + + +QS +++ 
Sbjct: 217 PGSLLGLLEQLLARDL-PLRYRLSSLEATEIGPDLLALLAAESRLLPHLHIPLQSGDDRI 275

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R ++ ++  A I       P   +  D++   P +    ++   +   +  + +L
Sbjct: 276 LRAMNRPYDRAQFAAVIERCAAALPEAAIGIDVMTGFPGEDEPAFQHTYELLAALPISYL 335

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            ++  +   GT   ++   
Sbjct: 336 HVFPYSQRAGTPAARLPDQ 354


>gi|325297732|ref|YP_004257649.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
           salanitronis DSM 18170]
 gi|324317285|gb|ADY35176.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
           salanitronis DSM 18170]
          Length = 433

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 8/219 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+     + I   +  +              + + G    L + Q
Sbjct: 146 CDRKCAYCAIPIITGRHVSRPMDEILDEVRLLVSQGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ +A    V         A P+    + F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIEKMAAIPGVKWIRLHY--AYPARFPKDLFRVMRENDNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+   +E    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 QRMNRHVTKAETYELIEQFRKEVPGIHLRTTLMVGFPGETEQDFEELKEFVRKVRFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  + E+GT   K +KD       +    +L  + Q I
Sbjct: 322 AFAYSEEEGTYSAKHYKDDVPQTVKQQRLDELMEMQQEI 360


>gi|323448466|gb|EGB04364.1| hypothetical protein AURANDRAFT_32629 [Aureococcus anophagefferens]
          Length = 494

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 12/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C ++C YC          V Q       L E+  +    G R ++ +          +  
Sbjct: 192 CNERCTYC---VVPNTRGVEQSRAPDEILAEIDDLGNR-GYREVTLLGQNVDAYGRDMRP 247

Query: 86  PQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG---VNRISLGVQSLE 141
            ++   +L  +A       ++ +  + ++P  +           G   +    +  QS +
Sbjct: 248 RRHFHDLLAAVADVARRHGDMRVRFVTSHPRYITDAVIDAVADHGDVIMPVFHMPAQSGD 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR +GR + A    + +   R   P   +S D I   P ++   +E  L        
Sbjct: 308 DAMLRLMGRGYTADRYRSIVAKIRKRLPDATISSDFIVGCPGESEAAFEATLALMDDVEF 367

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D       +   GT     
Sbjct: 368 DACMTAAYSPRPGTPMAHW 386


>gi|317500459|ref|ZP_07958683.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316898214|gb|EFV20261.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 440

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K C YC       +F S      + +   +       Q +++L      ++++     
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMERLIKEAKELAE-----QGVKELILVAQETTLYGKD-- 206

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L   + +  +++ + K   +       +   P  +     +  +K     + + L +Q
Sbjct: 207 --LYGEKCLHRLVEELCKIAGIRWIR--ILYCYPEEITDELIEVIKKEPKVCHYLDLPIQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ +GR  +  E    +   R   P +     LI   P +T  Q E  +Q    
Sbjct: 263 HASDSILKRMGRRTSKQELTDIVKKLRKEIPDICLRTTLITGFPGETEDQHEELMQFVDE 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              D L ++  + E+ T    M          E    DL  L Q I
Sbjct: 323 MEFDRLGVFTYSPEEDTPAAVMPDQI-AEEVKEERQADLMELQQEI 367


>gi|295103489|emb|CBL01033.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii
           SL3/3]
          Length = 431

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 64/204 (31%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C ++C YC      R     +    +S L E+  +    G R +         PS  L  
Sbjct: 152 CNRQCAYC---VIPRARGPVRSRAEESILAELHQLAA-AGYREVVLSAI--SLPSYGLDT 205

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             N+  +++  A+   +      ++  +P  +                +  L +QS    
Sbjct: 206 GTNLVELVEKCAQVPGIERIRLGSL--DPDMLTPEFISRLAAVDKLCPQFHLSLQSGCTA 263

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +LR + R + A E    +   R  +       + D I   P +T   +E           
Sbjct: 264 TLRRMRRVYTAQEYAQVVEQIRAAYGSRPVSFTTDCICGFPGETAEDFEESCAFLKKIGF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + ++  +   GT  Y       
Sbjct: 324 LKVHVFPYSRRSGTPAYDFPDQIH 347


>gi|239833059|ref|ZP_04681388.1| MiaB-like tRNA modifying enzyme [Ochrobactrum intermedium LMG 3301]
 gi|239825326|gb|EEQ96894.1| MiaB-like tRNA modifying enzyme [Ochrobactrum intermedium LMG 3301]
          Length = 427

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 78/203 (38%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C     +  Y  G    +      +  +++L G      +  G    S     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQVKRLVGNGYAEVVLTGVDMTSYGPDL 203

Query: 87  -------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
                  + +  +L+ +     +  +   +IEA+   ++       ++  +  + L +Q+
Sbjct: 204 PGNLRLGKLVKTVLNQVPDLQRLRLSSIDSIEADDDLMDA--IANEKRL-MPHLHLSLQA 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   ++I      R + P + F  D+I   P +T   ++  L+     
Sbjct: 261 GDDMILKRMKRRHLRDDSIRFCETVRGLRPDIVFGADIIAGFPTETEEMFQNSLKIVEEC 320

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            + HL ++  +  +GT   +M +
Sbjct: 321 GLSHLHVFPYSAREGTPAARMPQ 343


>gi|168180945|ref|ZP_02615609.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum
           NCTC 2916]
 gi|226950043|ref|YP_002805134.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum A2
           str. Kyoto]
 gi|182668291|gb|EDT80270.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum
           NCTC 2916]
 gi|226844016|gb|ACO86682.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum A2
           str. Kyoto]
          Length = 561

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 6/149 (4%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAI 158
            + ++     E +   +     +   K    RI    GVQ+   + L+ + R+ N     
Sbjct: 244 NLDTDATFHFEISADLLTKEELEILAKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIK 303

Query: 159 AAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF-- 215
             +   +N+   +   DLI  LP +    ++       S   + + L  L + KG+    
Sbjct: 304 EKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSSMRL 363

Query: 216 -YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +         P   +        + + 
Sbjct: 364 EAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|153951469|ref|YP_001398743.1| putative tRNA modifying protein [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938915|gb|ABS43656.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 455

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   R K  Q N I      +  ++ L         F    T S +   
Sbjct: 162 CNQKCSFCAIPSFKGRLKSRQINSI------IAELKDLVARGYKDFSFIAQDTSSYLFDK 215

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 216 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 273

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 274 DNMLKIMKRGTNSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEKLCEFVKDFG 331

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 332 FDRVSVFAYSKEEDTAAFDM 351


>gi|328952774|ref|YP_004370108.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328453098|gb|AEB08927.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 517

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 21/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YCD               I +    + ++         +  +   G     +  
Sbjct: 221 CPYSCIYCD---------------IPALSRGKWRYRSSAHVLGEMQLLNDSGYRSIYLTD 265

Query: 87  QNI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +       I +                E    +V V+     +KA  N ++ GV++  +
Sbjct: 266 DHFLLNRKRIGEICCGFLERRLEFRWGCEGRVDAVAVDQLSLMKKANCNFLAFGVEAGTQ 325

Query: 143 QSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           + L  L +     +   A+  A R    R+    +   P ++        + A    +D 
Sbjct: 326 KVLDRLNKKQTLLQVKHAVSEAKRQGIERVHGFFLVGSPGESKKDMMASFRFATRLQIDT 385

Query: 202 LSLYQLTIEKGTLFYKMH 219
               +L   +GT  ++ +
Sbjct: 386 FGFNRLCTYRGTPLWQEY 403


>gi|312136170|ref|YP_004003508.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311776221|gb|ADQ05708.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 351

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 66/192 (34%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+  +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNNQAQRYRMQEDEIVE--------VAKRAYQMGYHTVVLQSGEDMF 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+        +  NV++ I  +      + ++ ++ AG +R  +  ++  E+
Sbjct: 114 YTKDRMCSIIK------KIKENVDVAITLSIGERSYDEYKAFKDAGADRFLMRFETSNEK 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R      +  + I  +   +N+   +    +  LP QT+     ++        D + 
Sbjct: 168 LYRQYHPGMSFEKRIECLKWFKNLGYELGTGFLIGLPGQTIDDLAQDIILVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|296133939|ref|YP_003641186.1| RNA modification enzyme, MiaB family [Thermincola sp. JR]
 gi|296032517|gb|ADG83285.1| RNA modification enzyme, MiaB family [Thermincola potens JR]
          Length = 445

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 84/262 (32%), Gaps = 21/262 (8%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +   R  V             + + +      ++ I  G       +
Sbjct: 153 CNNFCTYC----IIPYARGPVRSRKRDNVITEAERLVGEGFREIVLTGIHIGAYGRDRDD 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQ 143
             ++A ++  +A+   +      ++E  P  V  +         V    + L +QS ++ 
Sbjct: 209 GYDLAALVADLARIKGLRRLRLGSVE--PEDVTPHLIATMADNRVICRHLHLPLQSGDDA 266

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R +N  E    ++   A      ++ D+I   P +T  Q++       +     
Sbjct: 267 VLEKMNRKYNTHEFTRLVNSIRAMVDDIAITTDIIVGFPGETDEQFDNTYNYVKALGFSR 326

Query: 202 LSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           L +++ +  KGT    F            S  +      + +           E+     
Sbjct: 327 LHVFKYSPRKGTPAANFPGQVPAETKEERSSRLIELGKEMGREFARRFLGREMEVLVEQR 386

Query: 259 LGAESLHNLNYWRY--GDYIGI 278
           L A+    L+Y      +Y+ +
Sbjct: 387 LEAD----LHYMEGLTDNYLAV 404


>gi|282882573|ref|ZP_06291192.1| iron-sulfur protein [Peptoniphilus lacrimalis 315-B]
 gi|281297548|gb|EFA90025.1| iron-sulfur protein [Peptoniphilus lacrimalis 315-B]
          Length = 310

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 59/147 (40%), Gaps = 3/147 (2%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI---SLGVQSLEEQS 144
           + + I +      +    V I+I      ++ N  +  ++    ++    LG+QS +E +
Sbjct: 93  DFSYIKNLYTYISSRDDIVGISIATRLDCIDENIIELLKQISEKKLLWLELGLQSTKEST 152

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +  + R ++  E    + + +    +    LIY LP  ++   +     A S     +  
Sbjct: 153 ISLINRGYSHKEFDKNLQILKKNNIKFLLHLIYGLPNDSIEDMKETFNYANSQGPFGIKF 212

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + L I+  +  YK + +    L S++ 
Sbjct: 213 HNLYIQTNSPLYKYYLENPFKLISKDE 239


>gi|170698977|ref|ZP_02890035.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
           IOP40-10]
 gi|170136084|gb|EDT04354.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
           IOP40-10]
          Length = 457

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|172061651|ref|YP_001809303.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           ambifaria MC40-6]
 gi|229890455|sp|B1YWB9|MIAB_BURA4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|171994168|gb|ACB65087.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
           MC40-6]
          Length = 457

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|115352797|ref|YP_774636.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           ambifaria AMMD]
 gi|122322269|sp|Q0BC21|MIAB_BURCM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115282785|gb|ABI88302.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
           AMMD]
          Length = 457

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|320103836|ref|YP_004179427.1| MiaB family RNA modification protein [Isosphaera pallida ATCC
           43644]
 gi|319751118|gb|ADV62878.1| RNA modification enzyme, MiaB family [Isosphaera pallida ATCC
           43644]
          Length = 633

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 80/254 (31%), Gaps = 31/254 (12%)

Query: 25  WPF---------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            PF         C K C YC     V   +  +++  +     ++ +R L    +     
Sbjct: 199 VPFQAFVRIMMGCDKFCTYC----IVPSVRGPEQS--RHPDEIVEEVRNLVDQGTREVTL 252

Query: 76  FGGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG-V 130
            G    S         I    D +AK   +     I    N P+ +        R    +
Sbjct: 253 LGQTVNSYRHKTPDGRITSFADLLAKLHDIDGLRRIKFVTNYPNDMTDELLAAIRDLPRI 312

Query: 131 NR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
           +R + +  QS  +Q L+ + R +        +   R   P   ++ D I     +T   +
Sbjct: 313 SRYLHVPAQSGCDQVLKRMKRGYTVGLYNDMMARIRETLPEAAVTSDFIVGFCGETEASF 372

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +  +     +   +  +++ +  +GT  Y +        P +            + +   
Sbjct: 373 QKTVDLVRRWRFKNSFIFKYSPREGTKAYNL-------FPDDVPEAVKRRRNNELLAVQN 425

Query: 248 LHAYEISNHSFLGA 261
             A E    +F+G 
Sbjct: 426 AIALE-DQQAFVGR 438


>gi|291519342|emb|CBK74563.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Butyrivibrio fibrisolvens
           16/4]
          Length = 477

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 13/203 (6%)

Query: 23  VHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           V+  F C   C YC     +  Y  G+E   +     +  +++L     +  +  G    
Sbjct: 189 VNISFGCNNFCSYC-----IVPYVRGRERS-RKPEDIVAEIKELVADGVVEVMLLGQNVN 242

Query: 82  SL-IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           S  +  +      D +     +     I  +  +P  +  +  +         + + L +
Sbjct: 243 SYGVGLEEKISFADLLRMVNDIEGLKRIRFMTPHPKDLSDDLIEAMATCDKVCHHMHLPL 302

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS   + L+ + R +     +  +   R   P ++   D+I   P +T   +   +    
Sbjct: 303 QSGSTEILKKMNRRYTKEHYLGLVEKLRARIPDVAITTDIIVGFPGETEEDFLDTMDVVD 362

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               D    +  +   GT    M
Sbjct: 363 KVHYDSAFTFIYSKRTGTPAAAM 385


>gi|282882002|ref|ZP_06290643.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
           315-B]
 gi|281298032|gb|EFA90487.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
           315-B]
          Length = 467

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 85/261 (32%), Gaps = 28/261 (10%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           KYL   +NN+      S   YV+  + C   C +C            +       + E++
Sbjct: 159 KYL-DLDNNLGANRLYSYKSYVNIMYGCNNFCTFC---IVPYTRGREKSREADEIVDEIK 214

Query: 61  WMRQLTGPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
            +    G + I+ +      +G G  +      +   ++ I     +       + ++P 
Sbjct: 215 SLID-KGSKEITLLGQNVNSYGRGLENKTSFAQLLYRINDIKGVERIR-----FMTSHPK 268

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-- 171
            +       +R      N + L VQ+   + L+ + R +   + +  I   R + P +  
Sbjct: 269 DISDELIYAFRDLDHLCNFLHLPVQAGSSRILKLMNRKYTKEDYLRKIDKIRQVNPDIAL 328

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S D++   P +T   +E  L        D    +  ++  GT   K        +     
Sbjct: 329 STDIMVGFPGETEEDFEETLDLVKRVEYDTSFTFLYSMRSGTPAAKSLNQVPDKI----- 383

Query: 232 AVDLYNLTQSITSAHGLHAYE 252
               +   Q +        YE
Sbjct: 384 ---KHERFQKLLDILYPIQYE 401


>gi|125973459|ref|YP_001037369.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum ATCC
           27405]
 gi|256005355|ref|ZP_05430320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
           2360]
 gi|281417660|ref|ZP_06248680.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum
           JW20]
 gi|238065327|sp|A3DDZ7|RIMO_CLOTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|125713684|gb|ABN52176.1| SSU ribosomal protein S12P methylthiotransferase [Clostridium
           thermocellum ATCC 27405]
 gi|255990674|gb|EEU00791.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
           2360]
 gi|281409062|gb|EFB39320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum
           JW20]
 gi|316940304|gb|ADU74338.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
           1313]
          Length = 453

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 65/204 (31%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC            +  +    + ++    +    + +  +       ++    
Sbjct: 162 CDNRCTYCA-------IPYIRGPYRSRKMEDIISEAEFLAGKGVKEVILVAQDVTVYGKD 214

Query: 88  NI--ALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                 +++ + +   +   +E    +   P  ++    +        V  + + +Q   
Sbjct: 215 LYGQKKLVELVREVSGI-EGIEWIRLLYTYPEEIDEELIKEIANNEKVVKYLDIPIQHAS 273

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ +GR   +      +   R   P +     LI   P +    +++       Y  
Sbjct: 274 DKILKLMGRRSTSEGIRNILDRLRAEVPDIVLRTSLIVGFPGEDEKDFKILYDFVRKYEF 333

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D L ++  + E+GT  Y +     
Sbjct: 334 DRLGVFTYSREEGTPAYDLKPQIK 357


>gi|332884749|gb|EGK05005.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
           [Dysgonomonas mossii DSM 22836]
          Length = 456

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 68/201 (33%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTP 81
           C K C YC            +    QS L E++ +R           ++++S  F     
Sbjct: 172 CDKVCSYC---IVPYTRGRERSRSPQSILNELENLRDKGFKEATLLGQNVNSYRFTNEDG 228

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           S++   +   +L+  AK          T  + P+ +     +   K       I L VQS
Sbjct: 229 SVV---DFPALLEMTAKAAPKMRIRFTT--SYPTDMTDETLEVIAKYDNLCKFIHLPVQS 283

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
              + L  + R ++    +  I   + I     +S D++     +T    +  L      
Sbjct: 284 GSSKMLNVMKRKYDREWYLNRIEAIKRIIPGCGISTDIMCGFHSETEEDQQETLSLMREV 343

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D   +++ +   GT   K 
Sbjct: 344 CFDSAFMFKYSERPGTYASKK 364


>gi|332561273|ref|ZP_08415591.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodobacter
           sphaeroides WS8N]
 gi|332275071|gb|EGJ20387.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodobacter
           sphaeroides WS8N]
          Length = 436

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    +    R +  I   G   +     
Sbjct: 158 CDKFCAFC-----VVPYTRGAE--VSRPFARLMAEARGLVERGVREITLLGQNVNAWSSD 210

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +A+   +      T  ++P+ +  +  + +      +  + L VQS  ++
Sbjct: 211 GRGLGGLIRELARIDGLERLRYTT--SHPNDMADDLIEAHGAEPKLMPYLHLPVQSGSDR 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H A   +  I   R   P +    D I   P +T   +E  L    +     
Sbjct: 269 ILKAMNRKHTAEHYLRLIERIRAARPDILLTSDFIVGFPGETEADFEATLDLIRAVGFGS 328

Query: 202 LSLYQLTIEKGTLFYKMH 219
              ++ +   GT   +  
Sbjct: 329 AFSFKYSARPGTPAAEKP 346


>gi|312602556|ref|YP_004022401.1| radical SAM superfamily protein [Burkholderia rhizoxinica HKI 454]
 gi|312169870|emb|CBW76882.1| Radical SAM superfamily [Burkholderia rhizoxinica HKI 454]
          Length = 473

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C +   V  ++    + +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSRCTFCLWPQTVGGHRYRVRS-VENVLEEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 262

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 263 VEAIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 313

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  +  A       + + 
Sbjct: 314 LNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETRETIQKTIAYAKEINPHTIQVS 373

Query: 206 QLTIEKGTLFYKM 218
                 GT  YK 
Sbjct: 374 LAAPYPGTTLYKQ 386


>gi|261400545|ref|ZP_05986670.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria lactamica ATCC
           23970]
 gi|269209614|gb|EEZ76069.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria lactamica ATCC
           23970]
          Length = 430

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIE 85
           C  YC F              +   LTE+  + Q  G + I+ +      + G     +E
Sbjct: 145 CSKYCSFCVVPYTRGEEFSRPLNDVLTEIAGLVQQ-GVKEINLLGQNVNAYRGE----ME 199

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              I      +     +     +     +P     +  + YR     V+ + L +QS  +
Sbjct: 200 NGEICDFATLLRIVHEIPGIERLRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 259

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      +S D I   P +T  ++E  L+     A D
Sbjct: 260 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 319

Query: 201 HLSLYQLTIEKGTLFYKMH 219
              ++  +   GT    + 
Sbjct: 320 LSFVFIYSPRPGTPAANLP 338


>gi|217967846|ref|YP_002353352.1| MiaB-like tRNA modifying enzyme YliG [Dictyoglomus turgidum DSM
           6724]
 gi|217336945|gb|ACK42738.1| MiaB-like tRNA modifying enzyme YliG [Dictyoglomus turgidum DSM
           6724]
          Length = 440

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 77/234 (32%), Gaps = 20/234 (8%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S +  VYV     C   C YC   +        +   I+  + E++    +   + +  +
Sbjct: 141 SPNFWVYVKIAEGCNNFCSYC---TIPFIRGRLRSRSIEDIVKEIE----IWIGKGVKEV 193

Query: 75  FFGGGTPSLIEPQNIAL--ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG-- 129
                  +           ++D +     +  +  + I  + PS +     +  + +   
Sbjct: 194 NLIAQDTTRYGEDLYGRPSLVDLLRNIEKIRGDFYVRILYSYPSRISEKLIEAIKNSEKV 253

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
           V    + +Q + +  L+ + R++   + I   H  +  F    +   ++   P +T   +
Sbjct: 254 VPYFDIPIQHVSDVILKRMNRSYKKDDIIKLWHRIKENFENAVIRTTVMVGFPGETEENF 313

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           E  +     Y  D L  +    E GT+        D     E+  +  Y +   
Sbjct: 314 EELIDFIKKYPFDRLGAFIYYNENGTISKGFENQVD-----EDEKLRRYEILME 362


>gi|218682821|ref|ZP_03530422.1| putative vitamin B12 binding methyltransferase [Rhizobium etli CIAT
           894]
          Length = 509

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 108/332 (32%), Gaps = 39/332 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++              + + +L   + +  I      P+     
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRSPELFA------REIARLYREQGVELINLADENPTSSRKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +A +   IA+N  V    +I        +  + +    YRKAGV R  LG+++ +E +L
Sbjct: 257 WLAFLEAMIAENVPV----QIVGSTRADDIVRDADILHLYRKAGVVRWLLGMENTDEATL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    +    AI L R          +    ++ +       ++ LSY  D +   
Sbjct: 313 ALIKKGGAKTSDREAIRLLRQHDILSMATWVVGFEEERLRDLWRGFRQLLSYDPDQIQAL 372

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA---------YEISNH 256
            +T  + T F+++ +D  ++       +  ++    +     L+           E++  
Sbjct: 373 YVTPHRWTPFFRIARDRQVI----ETDIRKWDYKHQVLKMRHLNPVVLVACVKLIEVAVQ 428

Query: 257 SFLGAESL---HNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGH 313
           +   A      H     R           HS          +   +  E   +       
Sbjct: 429 ARPKALMRILFHRDREQR-----------HSMRWYTQMGRRVWFHEILEFLFRRRHLKDG 477

Query: 314 AVVEKEFLSSEQQADEFLMMGLRLREGISVKD 345
             +E  + + +   +E ++   R R+ +   +
Sbjct: 478 PTLENFWGAPQDAEEESMLRPQRHRKSLDAAE 509


>gi|167043679|gb|ABZ08372.1| putative biotin and thiamin synthesis-associated domain protein
           [uncultured marine crenarchaeote HF4000_APKG2O16]
          Length = 326

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           FC + C +C     FN+ +  Y++     I       Q ++      +   +      P+
Sbjct: 68  FCSEDCSFCSQSAFFNTQINDYQLPSPEEIVQ-----QALKAKNEGANSFCLVAAWREPN 122

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
            ++ + +  I++ I KN  +S      IE +   + V   +  +K  V R +  +++   
Sbjct: 123 TLDFEKVCKIIEEINKNVGIS------IECSLGFLTVKQAKTLKKLQVKRYNHNLETSRS 176

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +    +   H   + +  + + RN    +    I  L  +T  Q E  +     +  + +
Sbjct: 177 KFSE-ICSTHTYQDRVKTLKIVRNAGLEICTGGIIGL-GETRKQREELIFEIAEFEPEEV 234

Query: 203 SLYQLTIEKGTLF 215
           ++  L    GT  
Sbjct: 235 TINMLIPMPGTPL 247


>gi|186475944|ref|YP_001857414.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia phymatum STM815]
 gi|184192403|gb|ACC70368.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia phymatum STM815]
          Length = 474

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 73/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 207 CRSRCTFCLWPQTVGGHR-YRTRSVENVLEEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 263

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 264 VEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  ++ A       + + 
Sbjct: 315 LNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETKETIQKTIEYAKDINPHTIQVS 374

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y+ 
Sbjct: 375 LAAPYPGTTLYRQ 387


>gi|126464040|ref|YP_001045153.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodobacter
           sphaeroides ATCC 17029]
 gi|229890628|sp|A3PPW5|MIAB_RHOS1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|126105851|gb|ABN78381.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 436

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    +    R +  I   G   +     
Sbjct: 158 CDKFCAFC-----VVPYTRGAE--VSRPFARLMAEARGLVERGVREITLLGQNVNAWSSD 210

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +A+   +      T  ++P+ +  +  + +      +  + L VQS  ++
Sbjct: 211 GRGLGGLIRELARIDGLERLRYTT--SHPNDMADDLIEAHGAEPKLMPYLHLPVQSGSDR 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H A   +  I   R   P +    D I   P +T   +E  L    +     
Sbjct: 269 ILKAMNRKHTAEHYLRLIERIRAARPDILLTSDFIVGFPGETEADFEATLDLIRAVGFGS 328

Query: 202 LSLYQLTIEKGTLFYKMH 219
              ++ +   GT   +  
Sbjct: 329 AFSFKYSARPGTPAAEKP 346


>gi|127514323|ref|YP_001095520.1| radical SAM domain-containing protein [Shewanella loihica PV-4]
 gi|126639618|gb|ABO25261.1| Radical SAM domain protein [Shewanella loihica PV-4]
          Length = 292

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 7/210 (3%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +CD   +    K  +   I     ++Q + Q     SIS +F   G    +    + 
Sbjct: 30  RCHFCD--MYTAPQKQFRAQKIDKIAEDIQRVAQ--RNLSISRVFLADGDAMSLPFNRLE 85

Query: 91  LILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            I   I ++   V+      +  N ++         R+ G++ + +G +S +++ L  + 
Sbjct: 86  AICLLIREHLPQVTRISSYCLPRNLNNKTDAQLARLRELGLSLLYVGCESGDDEVLARIE 145

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQL 207
           +      ++ A+   R    + S  ++  L     +        +       D+LS   +
Sbjct: 146 KGETFDSSLLALQRIRAAGMKSSVMILNGLGGVELSRQHALNSARLMNEAQPDYLSTLVV 205

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           T+  G        DGD  LP ++  +    
Sbjct: 206 TLPLGKARMDAGFDGDFKLPDQHGLLSEMQ 235


>gi|320101289|ref|YP_004176881.1| MiaB family RNA modification protein [Desulfurococcus mucosus DSM
           2162]
 gi|319753641|gb|ADV65399.1| RNA modification enzyme, MiaB family [Desulfurococcus mucosus DSM
           2162]
          Length = 428

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 77/230 (33%), Gaps = 34/230 (14%)

Query: 14  QGSNSLGVYV-----HWP---FCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEM-QWM 62
           +  + +GVYV       P    C+  C +C     + R+  +V   + I + +  + + +
Sbjct: 123 RARDRIGVYVENRVAPIPVQEGCLSNCSFC-----ISRHARRVLVSHSIDAVVKAVGKAV 177

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF 122
           R       ++ +  G          ++            +  NV          +   + 
Sbjct: 178 RDGAVEVQLTGMDLGTYG------MDLYRARRLPDLIRRIVENVRGNYMLRVGMINPEHL 231

Query: 123 QGYRKAGVNRI----------SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
           +   +  V  +           + +QS   + L+ + RN+   E +  +   ++  P +S
Sbjct: 232 RHILEDLVKVVADAENVYKFLHIPLQSGSNRVLKLMRRNYTVEEYLEMVDRVKSSIPEVS 291

Query: 173 F--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
              D+I   P ++   +   L+       + + L   ++   T    M +
Sbjct: 292 IATDIIVGHPMESEEDFAETLRVIEEAGFERVHLAGYSMRPLTCSAAMQQ 341


>gi|319899510|ref|YP_004159607.1| hypothetical protein BARCL_1386 [Bartonella clarridgeiae 73]
 gi|319403478|emb|CBI77058.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
          Length = 427

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 17/204 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G    +   +  ++ ++Q  G   I  I   G   +   P 
Sbjct: 150 CDHRCTFC-----IIPYSRGPSRSVPMGI-IIEQIKQFVGN-GIQEIVLTGVDLTSYGPD 202

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                 +  ++  I  +      + ++   +    +          K  +  + L +Q+ 
Sbjct: 203 LPGKITLGKLVSTILHHVPDLPRLRLS-SIDSIEADQELINLLAYEKRIMPYLHLSLQAG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   L+ + R H    AI       A+        DLI   P +T   ++  L       
Sbjct: 262 DNMILKRMKRRHLRENAIQFCQNLRAKRPTMVYGADLIAGFPTETEEMFQNSLTLINECG 321

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDG 222
           + +L ++  +  +GT   +M +  
Sbjct: 322 LTYLHVFPFSPREGTPAARMPQIN 345


>gi|319780366|ref|YP_004139842.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166254|gb|ADV09792.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 522

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 80/241 (33%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++          +   + +  L     +  I      P++ +  
Sbjct: 203 CPHLCNYCGQRGFWTRWRHRDP------VKFAREIAWLHRQHGVELINLADENPTVSKKA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             A +   IA+N  V     I        +  + +    YRKAGV R  LG+++ +EQ+L
Sbjct: 257 WRAFLDALIAENVPVL----IVGSTRADDIVRDADILHLYRKAGVIRWLLGMENTDEQTL 312

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + +  + S    AI L R          +     +         ++ ++Y  D +   
Sbjct: 313 QLIRKGGSTSSDREAIRLLRLSGILSMATWVSGFEDEGFRDLWRGFRQLIAYDPDQIQAL 372

Query: 206 QLTIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            +T  + T F+     +     D  L      V      +       +   E++  S   
Sbjct: 373 YVTPHRWTPFFRIARDRKVIQQDARLWDYKHQVLQMTRLKPWMLFFSVKLIELAVQSRPK 432

Query: 261 A 261
           A
Sbjct: 433 A 433


>gi|313673797|ref|YP_004051908.1| tRNA-i(6)a37 thiotransferase enzyme miab [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940553|gb|ADR19745.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 438

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   + +   +  ++ L         F G    S    +
Sbjct: 154 CDNFCSYC-----IVPYVRGREKS-RHYKEILDEVKFLVDNGVREVTFLGQNVNSYGKTL 207

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           + + N    L   A+   ++    +T  ++P     +              + L +Q+  
Sbjct: 208 DEKINFTQFLYMAAQIDGLNRIRFVT--SHPKDFNNDLVDLIASERKICEYLHLPLQAGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +   E    I  A+       +S D I   P +T   +E  L+   +   
Sbjct: 266 NDILKKMNRGYTFEEYEEKIFNAKEKIKGLALSSDFIVGFPGETDEDFEQTLKAVKNIEY 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           + +  ++ +   GT    M  +
Sbjct: 326 ETIFAFKYSPRPGTKASSMQDN 347


>gi|304392646|ref|ZP_07374586.1| hypothetical protein R2A130_2246 [Ahrensia sp. R2A130]
 gi|303295276|gb|EFL89636.1| hypothetical protein R2A130_2246 [Ahrensia sp. R2A130]
          Length = 434

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C  +C +C     +  Y  G    + +    ++ +++L G     ++  G    S    L
Sbjct: 155 CDHRCTFC-----IIPYGRGNSRSVPA-GGVVEQVKRLVGNGYKEAVLTGVDLTSWGCDL 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
                +  ++  I K     + + ++   +   V+    +     +  +  + L +QS +
Sbjct: 209 PGAPKLGRLVQAILKQVPDLTRLRLS-SIDSIEVDEPLMEALGSEQRLMPHLHLSLQSGD 267

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   + I       A         D+I   P +T   ++  ++      +
Sbjct: 268 DMILKRMKRRHLRDDTIRFCEDVRAVRPDVMFGADIIAGFPTETDAMFDNSMRIVDEAGL 327

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +   GT   KM  
Sbjct: 328 THLHVFPYSPRTGTPAAKMPP 348


>gi|300814913|ref|ZP_07095144.1| radical SAM protein, TIGR01212 family [Peptoniphilus sp. oral taxon
           836 str. F0141]
 gi|300511003|gb|EFK38272.1| radical SAM protein, TIGR01212 family [Peptoniphilus sp. oral taxon
           836 str. F0141]
          Length = 310

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 3/147 (2%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI---SLGVQSLEEQS 144
           + + I +      +    V I+I      ++ N  +  ++    ++    LG+QS +E +
Sbjct: 93  DFSYIKNLYTYISSRDDIVGISIATRLDCIDENIIELLKQISQKKLLWLELGLQSTKEST 152

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +  + R +   E    + + +    +    LIY LP  ++   +     A S     +  
Sbjct: 153 ISLINRGYTHKEFDKNLQILKKNNIKFLLHLIYGLPNDSIEDMKETFTYANSQGPFGIKF 212

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + L I+  +  YK + +    L S+  
Sbjct: 213 HNLYIQTNSPLYKYYLENPFKLISKEE 239


>gi|163745241|ref|ZP_02152601.1| MiaB-like tRNA modifying enzyme, hypothetical [Oceanibulbus
           indolifex HEL-45]
 gi|161382059|gb|EDQ06468.1| MiaB-like tRNA modifying enzyme, hypothetical [Oceanibulbus
           indolifex HEL-45]
          Length = 417

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVDQIKRLVDKGFNEVVLTGVDLTSWGADL 200

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 201 PATPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSL 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  ++   
Sbjct: 256 QHGDDMILKRMKRRHLRDDAIRFAQEARALRPDMTFGADIIAGFPTETEAMFENSMKLVE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
              +  L ++  +   GT   +M 
Sbjct: 316 ECDLTWLHVFPYSARPGTPAARMP 339


>gi|118086360|ref|XP_418914.2| PREDICTED: similar to CDK5 regulatory subunit associated protein
           1-like 1 [Gallus gallus]
          Length = 583

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 24/206 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTP 81
           C+  C YC      +  +    ++ I+  +   +   Q  G   I      +  +G    
Sbjct: 212 CLNACTYC----KTKHARGDLASYPIEELVDRAKQSFQDEGVCEIWLTSEDTGAYGRDIG 267

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLG 136
           + + P  +  +++ I +   +   +      NP  + + + +   K          + + 
Sbjct: 268 TDL-PTLLWKLVEAIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIP 320

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS  +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++  
Sbjct: 321 VQSASDSVLMDMKREYCVADFRRVVDFLKEKVPGITIATDIICGFPGETDEDFQETMKLV 380

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHK 220
             Y    L + Q     GT   KMH+
Sbjct: 381 EQYKFPSLFINQFYPRPGTPAAKMHQ 406


>gi|288801250|ref|ZP_06406705.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331861|gb|EFC70344.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 447

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 63/190 (33%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +   +  G + I       G   +   +
Sbjct: 165 CSYFCTYC---TIPFARGFSRNPSISSLVEQAEQAAR-EGGKEIVLTGVNIGDFGVSTNE 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + K   +      ++E  P  +     +     +A +    L +QS     L
Sbjct: 221 TFFDLIKALDKVEGIKRFRISSLE--PDLLSDEIIEYCANSRAFMPHFHLPLQSGSNDVL 278

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R ++       +H  + + P   +  D++     +    +E       S  V  L 
Sbjct: 279 RLMKRKYDRELFADKVHKIKTLIPNAFIGVDVMVGSRGEKPEFFEDCYNFLDSLDVTQLH 338

Query: 204 LYQLTIEKGT 213
           ++  +  +GT
Sbjct: 339 VFPYSERRGT 348


>gi|57238477|ref|YP_179608.1| putative tRNA modifying protein [Campylobacter jejuni RM1221]
 gi|81557413|sp|Q5HSX7|RIMO_CAMJR RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|57167281|gb|AAW36060.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni RM1221]
 gi|315058909|gb|ADT73238.1| Ribosomal protein S12p Asp88 methylthiotransferase [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 439

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|264680203|ref|YP_003280113.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
           CNB-2]
 gi|299533989|ref|ZP_07047341.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Comamonas
           testosteroni S44]
 gi|262210719|gb|ACY34817.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Comamonas testosteroni
           CNB-2]
 gi|298717898|gb|EFI58903.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Comamonas
           testosteroni S44]
          Length = 442

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F    +       Q         +++++     G  S
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLAEQGVKEITLLGQNVNAYLGKMGDSS 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P+       + Y K    V+ + L VQ  
Sbjct: 213 --EMADFALLLEYVAEIPGIERIRYTT--SHPNEFTPRLIEAYAKIPQLVSHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I    A      MS D I   P +T   ++  ++      
Sbjct: 269 SDKILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEEDFQKMMKLIHDVR 328

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 329 FDNSFSFIFSPRPGTPAANLH 349


>gi|162146542|ref|YP_001601001.1| radical SAM family Fe-S protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785117|emb|CAP54661.1| Fe-S protein, radical SAM family [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 477

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 79/244 (32%), Gaps = 14/244 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C +   V  ++  +    +    E++  +Q               T  L   +
Sbjct: 210 CKSHCTFCLWPQTVGGHR-YRTRSPEHVAAEIRLAKQYFPQVKEFFFDDDTFTDDLPRAE 268

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA  L  +   W+ ++           +V     +  ++ G+  + +G +S  +Q L  
Sbjct: 269 AIAKELGKMGVTWSCNAKA---------NVPRKTLEVLKENGLRLLLVGYESGNQQILHN 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A         +  ++    I  LP +T    +  ++ A       L +   
Sbjct: 320 IKKGMRVEVAREFTKNCHELGIKIHGTFILGLPGETKETIQETIRFATEINPHTLQVSLA 379

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
               GT  +K   +   +  S    +D   +  +      L   EI N    G E  +  
Sbjct: 380 APYPGTFLHKQATENGWLDESNAELIDENGVQMAPLHYPHLSHSEIFN----GVEEFYRK 435

Query: 268 NYWR 271
            Y+R
Sbjct: 436 FYFR 439


>gi|254304069|ref|ZP_04971427.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324261|gb|EDK89511.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 435

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q L+ +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILKKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTVDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D+  ++  +I KGT    M
Sbjct: 326 DNSYMFMYSIRKGTKAATM 344


>gi|331089440|ref|ZP_08338339.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|330404808|gb|EGG84346.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 440

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 23/226 (10%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K C YC       +F S      + +   +       Q +++L      ++++     
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMERLIKEAKELAE-----QGVKELILVAQETTLYGKD-- 206

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             L   + +  +++ + K   +       +   P  +     +  +K     + + L +Q
Sbjct: 207 --LYGEKCLHRLVEELCKIAGIRWIR--ILYCYPEEITDELIEVIKKEPKVCHYLDLPIQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ +GR  +  E    +   R   P +     LI   P +T  Q E  +Q    
Sbjct: 263 HASDSILKRMGRRTSKQELTDIVKKLRKEIPDICLRTTLITGFPGETEDQHEELMQFVDE 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              D L ++  + E+ T    M          E    DL  L Q I
Sbjct: 323 MEFDRLGVFTYSPEEDTPAAVMPDQI-AEEVKEERQADLMELQQEI 367


>gi|312622756|ref|YP_004024369.1| miab-like tRNA modifying enzyme ylig [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203223|gb|ADQ46550.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 440

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 70/205 (34%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + +  +    + ++    +    +    I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGKYTSRPIEDIVKEAKELAEKGYKEIVLTAQDTTKYGLD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ + K   +     +   + P  V+ +  +  + +   VN   + +Q +
Sbjct: 209 LYGKKMLHALLEELEKIEKIKWIRFLY--SYPEDVDESLIEVVKSSSKIVNYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKTTKEGIKRLIEKIRRSFDEVIIRTTVLVGFPTETDEEFEELCSFIKWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L  +  + E+GTL  ++ +  D
Sbjct: 327 FDRLGAFMYSQEEGTLASQLPQIDD 351


>gi|306824939|ref|ZP_07458282.1| radical SAM protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432766|gb|EFM35739.1| radical SAM protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 318

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 74/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HEKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +     +   +        + LG+Q+  E +   +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIEYLAELSERMHVTVELGLQTTFEATSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVKRLRKFPKIEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V        I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLMSQDEYVKDICDQLEIIPKHIVIH 265


>gi|205356112|ref|ZP_03222879.1| hypothetical protein Cj8421_1497 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345955|gb|EDZ32591.1| hypothetical protein Cj8421_1497 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 439

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|188586422|ref|YP_001917967.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351109|gb|ACB85379.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 451

 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 64/199 (32%), Gaps = 18/199 (9%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++ +++  +A        + I+    P  +        ++     N + L +QS  ++ L
Sbjct: 217 DLPMLVSELATLPYDDYRIRIS-SLEPLEMTEELLYAMKEHDKICNYLYLPLQSGSDRIL 275

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   +    +  A+ + P +    DLI   P +     +  ++      +  L 
Sbjct: 276 KLMNRKYTTDDFARIVEKAKTLLPGVGIMTDLIVGFPGEKEEDHKATMEFVEELKLSKLH 335

Query: 204 LYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +    T    F    +       +E +      L +     +      +       
Sbjct: 336 VFPYSPRPKTLAASFNVQVRPDIKRARTEEMKELGQKLARRFYQENLNTRLRV------- 388

Query: 261 AESLHNLNYWRYGDYIGIG 279
              L+  NY      +G G
Sbjct: 389 ---LYERNYETSDKILGEG 404


>gi|222112105|ref|YP_002554369.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acidovorax
           ebreus TPSY]
 gi|221731549|gb|ACM34369.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax ebreus TPSY]
          Length = 448

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 79/226 (34%), Gaps = 15/226 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC       R +     F    +       Q  G R ++ +      + G    
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLADQ--GVREVTLLGQNVNAYLGAMGD 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+L+ +A+   +      T  ++P+       + Y K    V+ + L VQ  
Sbjct: 211 TAEKADFALLLEYVAEIPGIERIRFTT--SHPNEFTPRLIEAYAKIPKLVSHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I    A      MS D I   P +T   ++  ++      
Sbjct: 269 SDRILMAMKRGYTAMEYKSTIRKLRAIRPDMAMSSDFIVGFPGETEEDFQKMMKLIDDVR 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            D+   +  +   GT    +H D    +    +      + ++I  
Sbjct: 329 FDNSFSFIFSPRPGTPAANLHDDTPHEVKLRRLQELQAVINRNILE 374


>gi|198276872|ref|ZP_03209403.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135]
 gi|198270397|gb|EDY94667.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135]
          Length = 438

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 75/217 (34%), Gaps = 14/217 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I+  +T+ +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGKIEDLVTQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIE--PNLLTDEIIEYVAQSRRFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   A I   +++ P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDTALFAAKIAKIKSLMPDAFIGVDVIVGTRGETPEYFEKAYEFIKGLDVTQLH 332

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           ++  +   GT         D V+P++        L +
Sbjct: 333 VFSYSERPGT----QALKIDYVVPAQEKHARSQRLLE 365


>gi|294785301|ref|ZP_06750589.1| radical SAM protein family [Fusobacterium sp. 3_1_27]
 gi|294487015|gb|EFG34377.1| radical SAM protein family [Fusobacterium sp. 3_1_27]
          Length = 304

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 83/251 (33%), Gaps = 21/251 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  N          ++  Q    +++ + +          +F   
Sbjct: 31  CPNRDGKLSKGGCIFCSENGSGDFTSGKLKSIHQQIDEQIELVSKKYKGNK-YIAYFQNF 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
           T +  +   +  I +    +  +   V + I   P  +E +  +   +        I LG
Sbjct: 90  TNTYADVNYLRKIYEEALSHKNI---VGLAIATRPDCLEDDVLKLLDELNKKTFLWIELG 146

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ ++  ++  R +       A     ++  +    +I  LPK+    +      + +
Sbjct: 147 LQTINDEVAKYFNRAYETKIYEEATKKLNSLNIKFVTHIILGLPKEKNDDYLKTAIFSQN 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                L L+ + + K T   K+++ G+L + S+           +I         EI  H
Sbjct: 207 CGTWGLKLHLMYVVKNTPLEKLYQSGNLKVHSKEE---YIEKIVNILENISP---EIVIH 260

Query: 257 SFLGAESLHNL 267
              G      L
Sbjct: 261 RMTGDGDRETL 271


>gi|255039128|ref|YP_003089749.1| Radical SAM domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254951884|gb|ACT96584.1| Radical SAM domain protein [Dyadobacter fermentans DSM 18053]
          Length = 471

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 87/251 (34%), Gaps = 27/251 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF---FGGGTPSLI 84
           C   C +C    +   +  G + F    + +          R +  +     G       
Sbjct: 170 CPHHCSFC----YKDAFFEGGKTFYTQLVDDALAEIDRLPGRHLYFLDDHLLGNARF--- 222

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +++   + G+ + +  +S V+  +  N         +   +AG+  + +G ++   ++
Sbjct: 223 -AESLFEGMRGMNRVFQGASTVDAILRGN-------LIEKAAEAGLRSLFVGFETFSPEN 274

Query: 145 LRFLGRNHNAS-EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+   +  N   +   A++   ++   ++   ++ L +     ++  +   +++ +   +
Sbjct: 275 LKQSNKKQNLEKDYAKAVNRLHSLGIMINGSFVFGLDEDDADVFKRTVDWGVNHGITTST 334

Query: 204 LYQLTIEKGTLFYKMH--------KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            + LT   GT  YK          ++ DL      V        +++   +        +
Sbjct: 335 YHVLTPYPGTELYKNMEAAGRIVTRNWDLYDTRHVVYKTAGLSAEALEQGYWWAYDAFYS 394

Query: 256 HSFLGAESLHN 266
              +   SLH+
Sbjct: 395 WKNIIKSSLHH 405


>gi|212704632|ref|ZP_03312760.1| hypothetical protein DESPIG_02695 [Desulfovibrio piger ATCC 29098]
 gi|212672031|gb|EEB32514.1| hypothetical protein DESPIG_02695 [Desulfovibrio piger ATCC 29098]
          Length = 448

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 97/300 (32%), Gaps = 38/300 (12%)

Query: 1   MKYLSAYENNMTGQGSNSLGV-YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTE 58
           + + S Y     G  + S  V +V+    C   C YC            +     + L E
Sbjct: 126 LDFTSHYVEREPGADTPSAPVGFVNIMQGCDNFCAYC---IVPYTRGRQKSRLTPAILDE 182

Query: 59  MQWMRQLTGPRSISSIFFGGGTP---SLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
            + +    G   I+ +          +  +  + A +L+ +A    +     +T   +P 
Sbjct: 183 CRHLLDR-GAHEITLLGQNVNAFGRDTHGDGVSFATLLEKVAALPGLKRLRYVT--PHPK 239

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-- 171
            +   + + +        R+ L +Q+  +  L+ +GR +++   +  +   R+  P +  
Sbjct: 240 DMGPEDVRAFADIPQLCPRLHLPLQAGSDAVLKRMGRKYDSVRYLELVASLRDARPDIAL 299

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S DLI   P +T   +   L+   +        +  +   GT   +      +    +  
Sbjct: 300 STDLIVGFPGETEEDFAATLELMRASDFMSSFSFCYSDRPGTRASR--FLDKIAPDVQQD 357

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGAES---LHN-----------LNYWRYGDYIG 277
            +      Q   S   L        + +G E    L N           L  W+  D  G
Sbjct: 358 RLLRLQALQEELSQRWL-------DARVGQECEVLLENASRREATADDSLQSWQGRDIYG 410


>gi|83949966|ref|ZP_00958699.1| MiaB-like tRNA modifying enzyme [Roseovarius nubinhibens ISM]
 gi|83837865|gb|EAP77161.1| MiaB-like tRNA modifying enzyme [Roseovarius nubinhibens ISM]
          Length = 419

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 85/234 (36%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 148 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 202

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +     ++   IL  +     +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 203 ATPRLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSLQ 257

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+    
Sbjct: 258 HGDDMILKRMKRRHLRDDAIRFAEEARRLRPEMTFGADIIAGFPTETEAHFENSLRLVED 317

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  L ++  +  +GT   ++    +      + A  L    ++  + H    
Sbjct: 318 CGLTWLHVFPYSRREGTPAARIPNQVN-GRVIRDRAARLRQAGEARVATHLAEQ 370


>gi|312880310|ref|ZP_07740110.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans
           DSM 12260]
 gi|310783601|gb|EFQ23999.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans
           DSM 12260]
          Length = 446

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            Q    ++ L E++ +    G R I+ +        +    
Sbjct: 156 CDHFCAYC---IVPYVRGRFQSRDPEAILREVRCLADR-GVREITLLGQNVNRFGVDRSD 211

Query: 88  NI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 +L  +A+   V      T  ++P        +   +       ++L VQS  ++
Sbjct: 212 GFSFPRLLREVAEVPGVLRVRYAT--SHPVDFSEELVRVMAEHPRVCPALNLPVQSGSDR 269

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  +GR ++ +    ++ L R   P      DLI   P +T   +   L        D 
Sbjct: 270 ILAAMGRGYDGASYRRSVGLLRERVPDAGLTTDLIVGFPGETEEDFRESLSLLEELRFDQ 329

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           +     ++  GT    +    D
Sbjct: 330 VHSAAYSVRPGTRAESLPGHLD 351


>gi|303247899|ref|ZP_07334167.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302490800|gb|EFL50701.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 501

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRS-ISSIFFGGGTPS 82
           C  +C YC  D      +   G + +++  S    M  + +       I  ++       
Sbjct: 223 CPHRCAYCVND----AIKSLYGAKGYLRWRSVSHVMDELAEARRIMPFIGYVWISDDAFF 278

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
               + I        +   +      T   +P+++          AG+  + +GVQ+   
Sbjct: 279 ARPLEEIRDFCKAWKERVALP----FTCLGSPATITREKMDALVDAGMIYLQMGVQTGSP 334

Query: 143 QSLRFLGRN-HNASEAIAAIHLARNIFPRM---SFDLIYALPKQTMTQWEMELQRALSY- 197
           +      R      + +AA+ +  +   R+   S+D I   P +T+      ++      
Sbjct: 335 RIQELFNRKAMGNDKMLAAMRIINSYKDRLLPPSYDFILDTPYETVKDRLDSIRFIARIP 394

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
               L  + L +  GT    M
Sbjct: 395 KPFRLQPFSLVLYPGTKLAAM 415


>gi|281412050|ref|YP_003346129.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga naphthophila
           RKU-10]
 gi|281373153|gb|ADA66715.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga naphthophila
           RKU-10]
          Length = 430

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 36/240 (15%)

Query: 28  CVKKCPYCDFNSH--------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C   S         +       E+ ++    E+  + Q T    I        
Sbjct: 148 CDRGCTFCSIPSFKGSLRSRSIEDITHEVEDLLKEGKKEIILVAQDTTSYGIDLYRKQAL 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                 P  +  +     + W         +  +P  +         +    V    + V
Sbjct: 208 ------PDLLRRLNSLNGEFWIR------VMYLHPDHLTEEIISAMLELDKVVKYFDVPV 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR  ++ E    +   R  FP       +I   P +T   +E   +   
Sbjct: 256 QHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKRFVE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D L  +  + E+GT+ + + +  D              + +       L   EISN
Sbjct: 316 EIQFDKLGAFVYSDEEGTVAFNLKEKVDP------------EVAKRRQEELLLLQAEISN 363


>gi|227485050|ref|ZP_03915366.1| tRNA 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236883|gb|EEI86898.1| tRNA 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 451

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%)

Query: 16  SNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
            N    YV+    C   C YC     V   +  +E+   S  + ++ +  L         
Sbjct: 157 PNHFQAYVNIMTGCDNFCSYC----IVPESRGREESRRPS--SIIEEVEYLVNQGYKEIT 210

Query: 75  FFGGGTPSLIEPQNIA----LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG- 129
             G    S     +       +L+ +A+   +      T  ++P  +     +  ++   
Sbjct: 211 LLGQNVNSYGNKADFNHTFPELLEKVAQIPNLKRLRFTT--SHPKDLSDELIKVIKRNDN 268

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQ 186
                 L +QS  ++ L+ + R +   + +      +   P +  S D+I   P +T   
Sbjct: 269 ICKYFHLPLQSGSDKVLKDMNRKYTQEKYLERARKLKEEIPEIAISTDIIVGYPTETEED 328

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +E  L+       D    ++ +    T   K+    D
Sbjct: 329 FEQTLKVCKEVGYDTAFTFKYSPRPKTRAAKLTPIDD 365


>gi|254463879|ref|ZP_05077290.1| MiaB-like tRNA modifying enzyme [Rhodobacterales bacterium Y4I]
 gi|206684787|gb|EDZ45269.1| MiaB-like tRNA modifying enzyme [Rhodobacterales bacterium Y4I]
          Length = 420

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 80/220 (36%), Gaps = 27/220 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 149 CDHRCTFC-----IIPYGRGNSRSVPAGV-VIDQIKRLVDRGYNEVVLTGVDLTSWGADL 202

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISL 135
                    +  IL  +     +  +   +IEA+ + +                +  + L
Sbjct: 203 PAKPRLGDLVMRILKLVPDLPRLRISSIDSIEADENLMQAIATEPRL-------MPHLHL 255

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q  ++  L+ + R H   +AIA    AR + P M+F  D+I   P +T   +E  L+ 
Sbjct: 256 SLQHGDDLILKRMARRHLRDDAIAFCEEARRLRPEMTFGADIIAGFPTETNAHFENSLKL 315

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                +  L ++  +  +GT   ++    +  +  E  A 
Sbjct: 316 VTDCGLTWLHVFPYSKREGTPAARIPNQVNGNVIKERAAR 355


>gi|134299740|ref|YP_001113236.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Desulfotomaculum reducens MI-1]
 gi|229890514|sp|A4J5Q8|MIAB_DESRM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|134052440|gb|ABO50411.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum reducens
           MI-1]
          Length = 456

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   Q     +  +++L           G    S  +  
Sbjct: 172 CNNFCTYC-----IVPYVRGRERSRQP-EDIIDEIKELVQEGYKEVTLLGQNVNSYGKDF 225

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                   +       + +E    + ++P   +    +    A        L  Q+   +
Sbjct: 226 KNNYRFADLLMAIDDITGLERVRFMTSHPRDFDQRLIEVVASAKKVCEHYHLPAQAGSNR 285

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  I   +   P  S   DL+   P +T   ++  L        D 
Sbjct: 286 VLKMMNRGYTREHYLELIRKIKERVPNASITADLMVGFPGETEEDFQETLDLVKQVRYDS 345

Query: 202 LSLYQLTIEKGTLFYKM 218
              +   I  GT   K+
Sbjct: 346 AFTFVYNIRSGTPAAKL 362


>gi|330820832|ref|YP_004349694.1| Radical SAM domain protein [Burkholderia gladioli BSR3]
 gi|327372827|gb|AEA64182.1| Radical SAM domain protein [Burkholderia gladioli BSR3]
          Length = 473

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  KC +C +   V  ++    + +++ L E++W+R       +  
Sbjct: 192 YLNYPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRVRS-VENVLAEVKWIRDNMP--EVKE 248

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           I F   T +  +P     + +       +        +AN         +  ++ G+  +
Sbjct: 249 IMFDDDTFTDFKP----RVEEIARGLGKLGVTWSCNAKANVPYAT---LKIMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       R +  ++    I  LP +T       ++ 
Sbjct: 302 LVGYESGDDQILLNIKKGLRTDIARRFNEDCRKLGIKIHGTFILGLPGETRDTIRKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       + +       GT  Y+ 
Sbjct: 362 AKEINPHTIQVSLAAPYPGTRLYEQ 386


>gi|319651610|ref|ZP_08005737.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2]
 gi|317396677|gb|EFV77388.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2]
          Length = 450

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 76/230 (33%), Gaps = 12/230 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
           N+A++L D  A+   +      +IEA+   +     +   ++ V    + + +QS     
Sbjct: 210 NLAMLLRDLEAQVKGLKRLRISSIEAS--QITDEVIEVMDQSKVVVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   +       ++ D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMEFFAERLERLKEALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ++  +   GT   +M    D  +  +N  V          +      YE
Sbjct: 328 HVFPYSKRTGTPAARMDDQIDEEI--KNERVHRLIALSDQLAKEYASQYE 375


>gi|290476182|ref|YP_003469082.1| tRNA methylthiolation protein [Xenorhabdus bovienii SS-2004]
 gi|289175515|emb|CBJ82318.1| involved in methylthiolation of isopentenylated A37 derivatives in
           tRNA, Fe-S protein [Xenorhabdus bovienii SS-2004]
          Length = 476

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 73/248 (29%), Gaps = 19/248 (7%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + M    +     +V     C K   YC F                  L E+  +    G
Sbjct: 139 DRMPEPRAEGPSAFVSIMEGCNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-G 194

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN 121
            R ++ +      + G         +I    + +     +     I     +P     + 
Sbjct: 195 VRDVNLLGQNVNAYRGAAF----DGDICTFAELLRLVAAIDGIDRIRFTTSHPIEFTDDI 250

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIY 177
              Y      V+ + L VQS  ++ L  + R H A E    I   R   P +  S D I 
Sbjct: 251 IAVYEDTPELVSYLHLPVQSGSDRILTQMKRAHTALEYKGIIRRLRKARPDILISSDFII 310

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P +T   +E  +Q       D    +  +   GT    +  D       + + +    
Sbjct: 311 GFPGETQDDFEKTMQLIADVNFDMSFSFIYSARPGTPAADLPDDVSEEEKKQRLYLLQQR 370

Query: 238 LTQSITSA 245
           + Q   S 
Sbjct: 371 INQQAMSF 378


>gi|229890680|sp|B1ZVI7|MIAB_OPITP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 480

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 68/226 (30%), Gaps = 26/226 (11%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL----------I 84
           C F    +     +   +   + E + +    G R ++ +  G    S           I
Sbjct: 189 CAFCIVPKTRGDERSRPMDDIVRECEQLAAR-GVREVTLL--GQIVTSYGRRDYTHTNGI 245

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            P     +L+ +     +          +P   + +    Y +       + L +QS   
Sbjct: 246 SP--FVQLLERVHALDGIERIRF--TSPHPRGFKDDLVAAYGRLPKLCGYVHLPLQSGSN 301

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + LR + R +        +    A       S D+I   P +T   +E   +   +   D
Sbjct: 302 RILRAMNRPYTRERYREIVDALRAVRSDMYFSTDVIVGFPGETDEDFEQTRELFEACNYD 361

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
              +++ ++  GT   +           E+V      L   +   +
Sbjct: 362 MAYVFKYSVRTGTPAAERGDQV-----PEDVKEQRNQLLLELLRQN 402


>gi|327482390|gb|AEA85700.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Pseudomonas stutzeri DSM 4166]
          Length = 437

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 22/263 (8%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +             +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPLADVLAEIVHLAENGVKEVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                 +  + A +L  +A    +      T  ++P        Q +      V  + L 
Sbjct: 206 YRH---DGHDFADLLHAVAAIEGIGRIRYTT--SHPLEFSDAIIQAHADIPQLVKYLHLP 260

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQ+  ++ L  + RNH A E  + I   +   P +  S D I   P +T   +E  ++  
Sbjct: 261 VQAGSDRILAAMKRNHTALEYKSRIRRLKAAVPDILISSDFIVGFPGETDKDFEQTMKLI 320

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL-----H 249
                D    +  +   GT    +  D    +  + +A+    + Q              
Sbjct: 321 EDVGFDFSYSFVYSARPGTPAADLADDTPEEVKKQRLAILQQRINQQGFENSRRMVGTTQ 380

Query: 250 AYEISNHSFLG-----AESLHNL 267
              +S++S          + HN 
Sbjct: 381 RILVSDYSKKDPGMLQGRTEHNR 403


>gi|323699985|ref|ZP_08111897.1| hypothetical protein DND132_2579 [Desulfovibrio sp. ND132]
 gi|323459917|gb|EGB15782.1| hypothetical protein DND132_2579 [Desulfovibrio desulfuricans
           ND132]
          Length = 325

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 76/229 (33%), Gaps = 14/229 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C+           +   I+      + +       S+ + +    + +    + +A 
Sbjct: 42  CVFCN-PQGSGSGLGDRGLSIREQWNFWRDIHVKKHRLSLFTAYLQSYSNTHGPAEKLAR 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR----KAGVNRI--SLGVQSLEEQSL 145
            LD +     ++    + I   P  ++            + G+  I   LG+QS  + +L
Sbjct: 101 ALDDLRGLPGLT---CLAIGTRPDCLDREKLDLLAQSRDRLGLEEIFLELGLQSASDATL 157

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALP----KQTMTQWEMELQRALSYAVDH 201
           + + R H+A+    A   A +    +   ++  LP    ++ + +    +       V  
Sbjct: 158 KHINRGHDAAAFAEAAREAADRGLTVVAHVMAGLPAPHGREGLPELLDTVAFVNDLPVRG 217

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +  + + + + T   +  + G  V P++   +              +  
Sbjct: 218 IKFHNVYVCRNTRLARWFEQGRYVPPTQEEYLHWLGEAIMRLDPSVVIH 266


>gi|77465601|ref|YP_355104.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacter sphaeroides
           2.4.1]
 gi|123757716|sp|Q3IW81|MIAB_RHOS4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|77390019|gb|ABA81203.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacter sphaeroides
           2.4.1]
          Length = 436

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    +    R +  I   G   +     
Sbjct: 158 CDKFCAFC-----VVPYTRGAE--VSRPFARLMAEARGLVERGVREITLLGQNVNAWSND 210

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +A+   +      T  ++P+ +  +  + +      +  + L VQS  ++
Sbjct: 211 GRGLGGLIRELARIDGLERLRYTT--SHPNDMADDLIEAHGAEPKLMPYLHLPVQSGSDR 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H A   +  I   R   P +    D I   P +T   +E  L    +     
Sbjct: 269 ILKAMNRKHTAEHYLRLIERIRAARPDILLTSDFIVGFPGETEADFEATLDLIRAVGFGS 328

Query: 202 LSLYQLTIEKGTLFYKMH 219
              ++ +   GT   +  
Sbjct: 329 AFSFKYSARPGTPAAEKP 346


>gi|332526540|ref|ZP_08402652.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rubrivivax
           benzoatilyticus JA2]
 gi|332110808|gb|EGJ10985.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rubrivivax
           benzoatilyticus JA2]
          Length = 444

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC       R +     F            +     ++   +   + G      
Sbjct: 154 CSKYCTYC--VVPYTRGEEVSRPFEDVLTEVADLADRGVKEVTLLGQNVNAYRGAMGESG 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  ++AL+L+ +A+   +      T  ++P+       + Y +    V+ + L VQ   +
Sbjct: 212 EIADLALLLEYVAEVPGIERIRFTT--SHPNEFTQRLIEAYGRIPKLVSHLHLPVQHGSD 269

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I   R   P +S   D I   P +T   +   ++       D
Sbjct: 270 RILSAMKRGYTALEYKSTIRKLREQRPGISLSSDFIVGFPGETEDDFAKTMKLIDDVGYD 329

Query: 201 HLSLYQLTIEKGTL 214
               +  +   GT 
Sbjct: 330 ASFSFVYSQRPGTP 343


>gi|291550087|emb|CBL26349.1| radical SAM protein, TIGR01212 family [Ruminococcus torques L2-14]
          Length = 315

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 79/230 (34%), Gaps = 23/230 (10%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQ----LTGPRSISS--IFFGGGTPSLI 84
           C +C          +G  +F  S    + + + +    L   R + +   +F   T +  
Sbjct: 45  CIFCS--------GMGSGDFAGSACKTITEQLAEGKAILARKRPVHAYIAYFQAFTSTYA 96

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLE 141
             + +  +     ++  V     + I   P  ++ +  +   +    +   + LG+Q++ 
Sbjct: 97  PIEYLRKVFTEAIEDPDVK---VLAIATRPDCLDSDVLELLDELNQIKPVWVELGLQTIH 153

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            +S R++ R +       A+H  +     +   +I  LP +T       ++      +D 
Sbjct: 154 PESARYIRRGYPLEVFDTAVHELKRRNLTVIVHVILFLPGETHEMMLETIEYLNHSNIDG 213

Query: 202 LSLYQLTIEKGTLFYKMHKDG--DLVLPSENVAVDLYNLTQSITSAHGLH 249
           + L  L I KGT     ++    D         +   +    + +    H
Sbjct: 214 IKLQLLHILKGTDLAVEYQKCLSDPAYTGPAFHIPDADEYIRLLTECIQH 263


>gi|163734559|ref|ZP_02141998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           litoralis Och 149]
 gi|161392052|gb|EDQ16382.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           litoralis Och 149]
          Length = 426

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              +   L E + + +  G R I+    ++    G  + 
Sbjct: 144 CDK---FCAFCVVPYTRGAEVSRPVTRVLDEARDLVER-GVREITLLGQNVNAYHGAGAD 199

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              Q +A ++        +     I     +P+ +  +  + +R     +  + L VQS 
Sbjct: 200 GNEQTLAQLI---WALNDIDGLERIRFTTSHPNDMRDDLIEAHRDCPKLMPYLHLPVQSG 256

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H A   +  I   R   P +  S D I   P++T   ++  L    +  
Sbjct: 257 SDKILKRMNRSHTADSYLRLIERIRAGRPDILLSGDFIVGFPEETEADFQATLDLIEAVN 316

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
             +   ++ +   GT   + 
Sbjct: 317 YGYAYSFKYSTRPGTPAAER 336


>gi|163787099|ref|ZP_02181546.1| Fe-S protein, radical SAM family [Flavobacteriales bacterium ALC-1]
 gi|159876987|gb|EDP71044.1| Fe-S protein, radical SAM family [Flavobacteriales bacterium ALC-1]
          Length = 232

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 2/133 (1%)

Query: 102 VSSNVEITIE--ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIA 159
           +  +  I  E       +     Q  ++AG  RI +G +S  ++ +  + R  +      
Sbjct: 40  IKQDAIIPFECITRAERLNDEVLQLLKEAGCYRIWIGAESGSQKIIDAMDRRVDVDVVKE 99

Query: 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           AI     +       ++   P +  T  E  +    +    H ++      KGT  Y   
Sbjct: 100 AIQKTNKLGMETGTFIMVGYPGENETDIEETITYLKAANPTHFTITVAYPIKGTSLYNEI 159

Query: 220 KDGDLVLPSENVA 232
           +D   + P+   +
Sbjct: 160 EDQITIQPNWETS 172


>gi|194334590|ref|YP_002016450.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
           DSM 271]
 gi|194312408|gb|ACF46803.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
           DSM 271]
          Length = 452

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 68/220 (30%), Gaps = 14/220 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC      R   +  +      L   + +        + + +         ++ 
Sbjct: 161 CDYGCGYCAIP-LARGRSLSIDP--DVVLDGARALAGAGYCEIVLTGVNIAAYRFGELDF 217

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  +LD +       S++E      P  +          +   +    L +Q   +  
Sbjct: 218 AGLLRLLDQVDVQRIRVSSIE------PDCLTDELIDVVASSQRIMPHFHLPLQGGSDVV 271

Query: 145 LRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R +  +     +  A        +  D++   P +T   ++       S  + +L
Sbjct: 272 LRSMARRYTTAYYRDRLFRAVRRISGCAVGADVMTGYPGETGEDFQSAYDFIASLPLAYL 331

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            ++  +I  GT   +  + G     + ++      L + +
Sbjct: 332 HIFTCSIRPGTALARQVQSGLRQPVAHDIVRHRSRLLREL 371


>gi|325479445|gb|EGC82541.1| radical SAM protein, TIGR01212 family [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 315

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 62/155 (40%), Gaps = 9/155 (5%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNR-ISLG 136
           + +       +++   K++ V+    I +      V  +      +     G++    LG
Sbjct: 93  TYMPLSEFKEVINACNKDYIVA----IAVSTRSDCVTYDKLVFLNEFREKTGIDITFELG 148

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q+   ++L  L R  + ++ I A  L +    R+   +I +LP   +       +   +
Sbjct: 149 LQTANYKTLDILNRGESLADFIRAASLLKEFDIRVCTHVILSLPWDGIRDVIESARIINA 208

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            +V  + ++ L I K T    M+ + ++ + S+  
Sbjct: 209 LSVKEVKMHSLFIVKDTKLANMYLNNEIKMISKEA 243


>gi|312878039|ref|ZP_07737977.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795191|gb|EFR11582.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 440

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + +  +    + ++    +    +    I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGKYTSRPIEDIVKEAEELAEKGYQEIVLTAQDTTKYGLD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ + K   +     +   + P  V+ N  +  + +   VN   + +Q +
Sbjct: 209 LYGKKMLPSLLEELEKIEKIKWIRFLY--SYPEDVDENLIEVVKSSSKIVNYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKTTKEGIKRLIEKIRRSFDEVVIRTTVLVGFPTETDEEFEELCSFLRWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L  +  + E+GT   ++ +  D
Sbjct: 327 FDRLGAFMYSQEEGTPASQLPQVDD 351


>gi|291522245|emb|CBK80538.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coprococcus catus GD/7]
          Length = 481

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ + +         +  G    S    L
Sbjct: 199 CNNFCSYC-----IVPYVRGRERS-REPKDIIREIERDVADGVKEVMLLGQNVNSYGKNL 252

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L  I K   +       + ++P  +         ++      + L +QS  
Sbjct: 253 ENPISFAKLLQEIEKIEGLERIRF--MTSHPKDLSDELIAVMGQSKKICRHLHLPLQSGS 310

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R   P +S   D+I   P +T   +   +        
Sbjct: 311 SRILKLMNRKYTKESYLDLVDRIRKGCPDISLTTDIIVGFPGETEEDFLETMDVVEKVGF 370

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 371 DSAFTFIYSKRTGTPAASM 389


>gi|313897043|ref|ZP_07830590.1| tRNA methylthiotransferase YqeV [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312974490|gb|EFR39958.1| tRNA methylthiotransferase YqeV [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 431

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 34/233 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGG------GT 80
           C   C +C            +   + +   E + +        + + I  G       G 
Sbjct: 154 CQNFCTFC---IIPYARGPVKSRELAAVRRETERIAAAGFHEIVLTGIHLGAYGIDLPGR 210

Query: 81  PSL-------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           P+L       +    +  +  G  ++  +S+++   I   P                  +
Sbjct: 211 PTLADACRTALSLPELRRLRLGSLESVELSNDLLELIRTEPRFA-------------AHL 257

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMEL 191
            L +Q+  +  L  + R+++ +     I   R       +S D+I   P +T  Q+E  L
Sbjct: 258 HLPLQAGSDGVLTAMNRHYDTAAFARLIEDVRRAVPGVAVSTDIIVGFPGETEAQFEESL 317

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                     + ++  +  KGT   +      +  P                +
Sbjct: 318 DFVRRMGFARMHVFPYSARKGTPAARRPD--QVPAPIRKERAARMQALAEELA 368


>gi|291087896|ref|ZP_06347812.2| radical SAM domain protein [Clostridium sp. M62/1]
 gi|291073644|gb|EFE11008.1| radical SAM domain protein [Clostridium sp. M62/1]
          Length = 322

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 77/215 (35%), Gaps = 9/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C+    + + K  +   +   + +++          +  +F   G   +++ 
Sbjct: 57  CAHNTCTFCN----MYKAKDFRVRSMDEIMEDLR-EAHDGYGAYVQKVFLADGDALVLQT 111

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  ILD + + +             +         +  ++AG+  + +G +S +++ L
Sbjct: 112 EKLLAILDAVRELFPNCVRVASYGTAQDILRKSEEELRQLKEAGLGIVYVGAESGDDEIL 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLS 203
           R + +   A E   A    +    + S  LI  L  +           +   +   ++ S
Sbjct: 172 REINKGVTARELKEAGQKLKRCGIQTSVTLISGLGGRKKVKEHALACAELITAMNPEYAS 231

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              L + +GT  Y+   +G     + +  VD   +
Sbjct: 232 FLTLRLYEGTPMYEDVVEGRFERITADEIVDEMKI 266


>gi|327314071|ref|YP_004329508.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289]
 gi|326945694|gb|AEA21579.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289]
          Length = 450

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S +++ +      G R I       G       +
Sbjct: 168 CSYFCTYC---TIPYARGFSRNPTIASLVSQAEEAAH-EGGREIVLTGVNIGDFGETTGE 223

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      ++E  P  ++          +A +    + +QS  ++ L
Sbjct: 224 RFLDLVKALDRVEGIRRYRISSLE--PDLIDDELIAYCAQSRAFMPHFHIPLQSGSDEVL 281

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     I L + + P   +  D++     +    +E       S  V  L 
Sbjct: 282 KLMHRRYDTALFAHKIRLIKEMMPDAFIGVDVMVGSRGERPEYFEDCYNFLESLPVTQLH 341

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 342 VFPYSERPGT 351


>gi|312794639|ref|YP_004027562.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181779|gb|ADQ41949.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 351

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+  +RY++ ++  ++        + +        ++    G    
Sbjct: 62  YCKNDCFYCGLRRSNNQAQRYRMQEDEIVE--------VAKRAYQMGYRTVVLQSGEDMY 113

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+        + S+V++ I  +      + ++ ++ AG +R  +  ++   Q
Sbjct: 114 YNKDMLCSIIK------KIKSSVDVAITLSIGERSYDEYKAFKDAGADRFLMRFETSNRQ 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
                    +    I  +   +++   +    +  LP QT+     ++        D + 
Sbjct: 168 LYEKYHPGMSFENRIECLKWIKSLGYELGTGFLIGLPGQTIDDLVQDILLVKELDADMIG 227

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 228 IGPFIPHPQTPL 239


>gi|312864772|ref|ZP_07725003.1| radical SAM protein, TIGR01212 family [Streptococcus downei F0415]
 gi|311099899|gb|EFQ58112.1| radical SAM protein, TIGR01212 family [Streptococcus downei F0415]
          Length = 308

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 12/206 (5%)

Query: 35  CDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +            +   + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPELPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HDKVKV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E + + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAELSERMHVTLELGLQTTYEATSKLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P++     LI  LP +T       ++R +    +D + L+
Sbjct: 160 NRAHSYQLYVDTVKRVRELAPKVEIVSHLINGLPGETHEMMVENVRRCVTDNDIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L +   T   + + +G L L S+  
Sbjct: 220 LLHLMTNTRMQRDYHEGRLHLLSQEE 245


>gi|157960282|ref|YP_001500316.1| radical SAM domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845282|gb|ABV85781.1| Radical SAM domain protein [Shewanella pealeana ATCC 700345]
          Length = 294

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 7/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD  +  ++    Q+        ++  +        IS +F   G    +    +  
Sbjct: 31  CSFCDMYTQPQKRFRAQKA--DKIEQDLISVANSQA--HISRVFLADGDAMTLPFARLEA 86

Query: 92  ILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I   I K    V+      +  N ++      Q  R+ G++ + +G +S +++ L  + +
Sbjct: 87  ICLLIKKYLPNVTRISSYCLPRNINNKTPEQLQRLRELGLSLLYIGCESGDDEVLERIKK 146

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQLT 208
                 ++AA+   +    + S  ++  L     +    E   +   +   ++LS   +T
Sbjct: 147 GETFDSSLAALQKIKAAGIKASVMILNGLAGVELSKQHAENSAKLMNAAQPEYLSTLVVT 206

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +  GT        G   LP++    +  ++  S   
Sbjct: 207 LPLGTERMDEAFGGHFQLPNQAQLFEEMHILLSKLE 242


>gi|312793173|ref|YP_004026096.1| miab-like tRNA modifying enzyme ylig [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180313|gb|ADQ40483.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 440

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + +  +    + ++    +    +    I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGKYTSRPIEDIVKEAKELAKKGYQEIVLTAQDTTKYGLD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ + K   +     +   + P  V+ N  +  + +   VN   + +Q +
Sbjct: 209 LYGKKMLPSLLEELEKIEKIKWIRFLY--SYPEDVDENLIEVVKSSSKIVNYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKTTKEGIKRLIEKIRRSFDEVVIRTTVLVGFPTETDEEFEELCSFLRWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L  +  + E+GT   ++ +  D
Sbjct: 327 FDRLGAFMYSQEEGTPASQLPQVDD 351


>gi|281424718|ref|ZP_06255631.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris F0302]
 gi|281401088|gb|EFB31919.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris F0302]
          Length = 444

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C   C YC     +  Y  G+E       + +  ++ L           G      G  P
Sbjct: 156 CNNFCHYC-----IVPYTRGRERSRD-VESILAEVKDLHDKGFKEVTLLGQNVNSYGLLP 209

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +   P+N     + + K      ++ +     NP  +  +      +       I    Q
Sbjct: 210 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDILHAIAEEPNLCKHIHFPAQ 269

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +   E +  +   + I P      D+      +T    ++ L     
Sbjct: 270 SGSNKILKLMNRKYTREEYLDKVAAIKRIIPGCGLTTDIFVGYHDETEEDQQLTLSLVKE 329

Query: 197 YAVDHLSLYQLTIEKGTLFYK 217
              D   +++ +   GT   K
Sbjct: 330 VGFDSAFMFKYSERPGTYAAK 350


>gi|257462249|ref|ZP_05626666.1| MIAB protein [Fusobacterium sp. D12]
 gi|317059918|ref|ZP_07924403.1| adenosine tRNA methylthiotransferase [Fusobacterium sp. D12]
 gi|313685594|gb|EFS22429.1| adenosine tRNA methylthiotransferase [Fusobacterium sp. D12]
          Length = 435

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 18/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVRDVEQYVKKGAKEIMLLGQNVNSYGHDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 A +L  I K   V  +  +  +  +P     +      K       + L +QS 
Sbjct: 208 KNGDTFARLLTEICK---VDGDFIVRFVSPHPRDFTDDVIDVIAKEEKIAKCLHLPLQSG 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             Q L+ + R +   + ++  H  +N  P ++   D+I   P +T   +   L+      
Sbjct: 265 SSQILKRMNRGYTKEQYLSLAHKIQNRIPGVALTTDIIVGFPGETEQDFLDTLEVVREIN 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
            D+  ++  +I +GT    M + 
Sbjct: 325 YDNAFMFMYSIRQGTRAATMQEQ 347


>gi|291276741|ref|YP_003516513.1| MiaB-like tRNA modifying enzyme [Helicobacter mustelae 12198]
 gi|290963935|emb|CBG39772.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter mustelae
           12198]
          Length = 413

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 72/194 (37%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C YC     +   +    ++ Q+    ++ +  L        +  G    S  +  
Sbjct: 143 CDFACSYC----IIPSVRGISRSYPQA--RVLEQIGILADHGVSEVVLTGTNVGSYGKDF 196

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
             NIA ++  I+K   +      ++E  PS ++    +      + R + + +Q   ++ 
Sbjct: 197 GSNIAKLIHEISKIKGILRIRIGSLE--PSQIDEEFLELLEGDFLERHLHIALQHSSDRM 254

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R++  +   A +    +    +  D I   P +++  WE  L+      + H+  
Sbjct: 255 LEIMNRHNRVASDRALLEKIADRGFAIGTDFIVGHPGESVQVWEEALENLTQLPLTHIHP 314

Query: 205 YQLTIEKGTLFYKM 218
           +  +I   T   KM
Sbjct: 315 FIYSIRDNTPSAKM 328


>gi|260683603|ref|YP_003214888.1| putative radical sam protein [Clostridium difficile CD196]
 gi|260687263|ref|YP_003218397.1| putative radical sam protein [Clostridium difficile R20291]
 gi|260209766|emb|CBA63567.1| putative radical sam protein [Clostridium difficile CD196]
 gi|260213280|emb|CBE04822.1| putative radical sam protein [Clostridium difficile R20291]
          Length = 429

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +    +  + E+ + +   T   ++          +L  P
Sbjct: 145 CNNFCTYC---IVPYTRGRERSRTPEDIINEIKELVANGTKEITLLGQNVDSYGKTLENP 201

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + + +L  +     +       + ++P  +        R        + L +Q      
Sbjct: 202 VSFSELLRKVNDIEGIERVRF--MTSHPKDISDEVIYAIRDCDKVCEFLHLPIQCGSSSL 259

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++     +  I  A+   P +  S DL+   P +T       L        D  
Sbjct: 260 LKKMNRHYTKEYYLEIIEKAKKEVPGIAFSTDLMIGFPGETEEDLLDTLDVVEKVRYDSA 319

Query: 203 SLYQLTIEKGTLFYKM 218
             +  +  +GT   KM
Sbjct: 320 FTFIYSKRQGTPAAKM 335


>gi|148925626|ref|ZP_01809314.1| hypothetical protein Cj8486_1492c [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145845636|gb|EDK22727.1| hypothetical protein Cj8486_1492c [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 439

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|189425254|ref|YP_001952431.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421513|gb|ACD95911.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 460

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 14/240 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC           GQ+   +     +  +R L     +  ++F     +   P 
Sbjct: 194 CPFGCSYC-----TYPLLEGQQMRTRPVAEIIAEIRSLVNDHGVDYLYFVDDIFNY--PV 246

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    L     +  +   V  +   NP  +        ++AG + I  G  S     L  
Sbjct: 247 SFCEQLCTAMIDAGL--QVNWSAFINPDFITPQLLDLMQRAGCDAIEFGTDSGSPGMLTS 304

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH-LSLYQ 206
           L ++    +  +A  L R      +  +I+  P +T        Q          +++  
Sbjct: 305 LCKSFTLGQVRSASLLCREAGLDFAHYIIFGGPGETEETILDTFQLMDELNPTAVIAMTG 364

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT---QSITSAHGLHA-YEISNHSFLGAE 262
           + I   T  Y+   D  ++    ++    + L    +   S        +  N    G E
Sbjct: 365 VRIYPRTRLYRTALDEGIITVETDLLQPTFYLAPAIRDRLSTIVTEQAMQRKNWIVPGLE 424


>gi|118581394|ref|YP_902644.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504104|gb|ABL00587.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 293

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 76/194 (39%), Gaps = 13/194 (6%)

Query: 28  CVKK-CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C ++ C +C     + + K  +   +   L E+Q +  L     +  +F   G   +   
Sbjct: 26  CSQRQCAFCG----MYKGKDFRLRPVGEILEEIQEI-PLPYRSRVQRVFLADGDALVYPF 80

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
             +  ILD +A   T+     +   A+P S+   +       R+  ++ + LG++S ++ 
Sbjct: 81  DGLVTILDSLA--TTLPGLTRVASYASPRSLTTKDAGQLALLREKRLSMLYLGLESGDDA 138

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
           +L+ + + + A E      +AR+   ++S   I  L    +++       +       ++
Sbjct: 139 TLKAINKGYTADEIAELATMARDAGMKLSVTAILGLAGRARSLEHARATAEWVNRVNPEY 198

Query: 202 LSLYQLTIEKGTLF 215
            SL  L       F
Sbjct: 199 FSLLTLFHRHNEEF 212


>gi|34763969|ref|ZP_00144862.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27886260|gb|EAA23543.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 435

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 24/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +      K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR +GR +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           D+  ++  +I KGT    M    +                Q +       ++E S+
Sbjct: 326 DNSYMFMYSIRKGTKAAIMDNQIE--------EAVKKERLQRLMEVQNKCSFEESS 373


>gi|237722492|ref|ZP_04552973.1| radical SAM domain-containing protein [Bacteroides sp. 2_2_4]
 gi|229448302|gb|EEO54093.1| radical SAM domain-containing protein [Bacteroides sp. 2_2_4]
          Length = 292

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 67/194 (34%), Gaps = 9/194 (4%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
            KC +C    H  ++++   + ++S L  +   +          +F  G  P  +    +
Sbjct: 28  HKCKFCSLY-HGTKFRLSPVSEVESDLKIIHEYQP-----KARRVFLTGANPFALSYNRL 81

Query: 90  ALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +   I K       +   +  A+  S  V   +  R    + IS+G +S ++++L  +
Sbjct: 82  LDLGLLIRKYLPYCETIGTFSRIADIKSKSVEELKNLRHLKFDSISIGTESGDDETLSRM 141

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + + A++ +           R +   +  L    +         +         ++   
Sbjct: 142 NKGNTAADILEQCRKLEEANIRYNLVYLTGLAGKGKGQQNAIHTAEIFNQLHPFTINFVS 201

Query: 207 LTIEKGTLFYKMHK 220
           LT+   +  Y+  +
Sbjct: 202 LTVFPESELYQEIQ 215


>gi|77747710|ref|NP_779964.2| hypothetical protein PD1779 [Xylella fastidiosa Temecula1]
 gi|182682396|ref|YP_001830556.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
           fastidiosa M23]
 gi|229891033|sp|B2I8U1|MIAB_XYLF2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891222|sp|Q87AP4|MIAB_XYLFT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|182632506|gb|ACB93282.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xylella fastidiosa M23]
 gi|307578676|gb|ADN62645.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 497

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +++  T +       +V     C K   YC F               +  LTE+  +
Sbjct: 178 IEKFDHLPTPRAEGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPFEDVLTEIAHL 233

Query: 63  RQLTGPRSISSI-----FFGGGT---------PSLIEPQNIALILDGIAKNWTVSSNVEI 108
               G R I+ +      + G           P+     ++ L++  IA+  ++      
Sbjct: 234 ATQ-GVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFT 292

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           T  ++P     +  + YR      N + L VQS  ++ L  + R + A E  + I   R 
Sbjct: 293 T--SHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRA 350

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + P +S   D I   P ++ T ++  +Q       D    +  +   GT    +   
Sbjct: 351 VRPDISISSDFIIGFPGESDTDFQKTMQLIKDIGFDQSFSFIYSRRPGTPASNLEDH 407


>gi|28057765|gb|AAO29613.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
          Length = 475

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +++  T +       +V     C K   YC F               +  LTE+  +
Sbjct: 156 IEKFDHLPTPRAEGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPFEDVLTEIAHL 211

Query: 63  RQLTGPRSISSI-----FFGGGT---------PSLIEPQNIALILDGIAKNWTVSSNVEI 108
               G R I+ +      + G           P+     ++ L++  IA+  ++      
Sbjct: 212 ATQ-GVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFT 270

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           T  ++P     +  + YR      N + L VQS  ++ L  + R + A E  + I   R 
Sbjct: 271 T--SHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRA 328

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + P +S   D I   P ++ T ++  +Q       D    +  +   GT    +   
Sbjct: 329 VRPDISISSDFIIGFPGESDTDFQKTMQLIKDIGFDQSFSFIYSRRPGTPASNLEDH 385


>gi|42524966|ref|NP_970346.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Bdellovibrio bacteriovorus HD100]
 gi|39577177|emb|CAE81000.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Bdellovibrio bacteriovorus HD100]
          Length = 523

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 18/202 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C YC    +  VR + V       +FL +MQ +    G R    I         + 
Sbjct: 175 CPYRCEYCLSSLDKAVRNFDVP------AFLADMQKLMDR-GARQFKFID----RTFNLS 223

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQ 143
           P     IL+   +   +   + +  E  P  +     +  +K  AG  +  +G+Q+    
Sbjct: 224 PSTCTQILEFFLERVHL--GLFLHFEMVPDRLPTEIRELIKKFPAGALQFEIGIQTWNTD 281

Query: 144 SLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             R + R ++  +       LA         DLI  LP + +  +            D +
Sbjct: 282 VARLVSRRNDLEKVKDNFRFLASETGVHTHADLIVGLPGEDIHSFARGFDTLAELRPDEI 341

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
            +  L   KG    +  K+ ++
Sbjct: 342 QVGILKRLKGAPIARHDKEWEM 363


>gi|319957025|ref|YP_004168288.1| miab-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
           16511]
 gi|319419429|gb|ADV46539.1| MiaB-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
           16511]
          Length = 421

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 16/219 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     +  +  G           ++ +R+L        I  G    S    +
Sbjct: 146 CNFRCSYC-----IIPFVRGNARSHDE-EQILEQVRRLAANGFGEFILTGTNVGSYGRDR 199

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
              +A +L  +++   V      ++E  P  ++    +   +  + R + + +Q   ++ 
Sbjct: 200 GTSLAKLLKRMSQIRGVRRIRIGSLE--PIQIDAEFMELLAEPWMARHLHIALQHTSDRM 257

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R +   E +            +  D I   P +   +W   ++R     + H+  
Sbjct: 258 LELMNRRNRYPEDLKLFETLAAKGYALGTDFIVGHPGEGEAEWREAMERIDVLPLTHIHA 317

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSI 242
           +  +  +GT    +    +L  P  +VA      LT++I
Sbjct: 318 FTYSPREGTASTSL----ELPRPRGDVAKARHRELTEAI 352


>gi|153812695|ref|ZP_01965363.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174]
 gi|149831211|gb|EDM86300.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174]
          Length = 419

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 24/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTP-- 81
           C + C YC            +   I+  L E++ +        + +      +G   P  
Sbjct: 133 CNQFCTYC---IIPFARGRVRSRKIEDVLREVETLAAKGYKEVVLTGIHLSSYGVDFPKE 189

Query: 82  ---SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
              SL+       ++  +++   +S     ++E  P  +     +G  K G       L 
Sbjct: 190 ERESLLS------LIQAVSRVEGISRIRLGSLE--PRIITEEFLEGIVKTGKVCPHFHLS 241

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRA 194
           +QS   ++L+ + R ++A E      L R  +  P ++ D+I   P++T   +E   +  
Sbjct: 242 LQSGCNKTLKNMNRRYSAQEYAEKCELIRKFYPAPALTTDVIVGFPQETEEDFEESYEFV 301

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                    +++ +   GT    M
Sbjct: 302 KKIHFYETHIFKYSRRHGTKAASM 325


>gi|15668730|ref|NP_247529.1| hypothetical protein MJ_0550 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496037|sp|Q57970|Y550_METJA RecName: Full=Uncharacterized protein MJ0550
 gi|1591255|gb|AAB98542.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 365

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 10/206 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C  C +       K+  EN I  F   ++  ++        S+       S ++ + +  
Sbjct: 68  CLMCSYLMDSSPEKITAENIINQFNYAIEKYKEKIKDLKDFSVKIFTSG-SFLDDREVPK 126

Query: 92  ILDGI--AKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVN-RISLGVQSLEEQSL-R 146
                   K     +  E+ IE+ P  ++ +     RK   VN  I +G++S  E+   +
Sbjct: 127 EARNYIFKKLSEFDNLKEVAIESRPEFIDEDKLNEIRKYLDVNVEIGVGIESFNEEIREK 186

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMS----FDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + +     + I AI LA+N    +        ++   K+ +        + +      +
Sbjct: 187 AINKGITNEQIIRAIELAKNYNIGIKAYLLIKPLFITEKEAIYDSISSANKCIELGCSRI 246

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPS 228
           S    T+ KG++            P 
Sbjct: 247 SFCPATVHKGSVMEFFFNKNQYRPPF 272


>gi|317055481|ref|YP_004103948.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
 gi|315447750|gb|ADU21314.1| Radical SAM domain protein [Ruminococcus albus 7]
          Length = 293

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 10/224 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     V       E +I+  L E+  +         S+I      P  +  
Sbjct: 25  CTHNKCKFCTMYRDVPFKLQPME-WIEEDLKEIAKVAP-----DASTIQLLSANPIAMTY 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +A IL+ I +       +       +  +  V   +  ++ G+  ISLG++S ++ +L
Sbjct: 79  DKLAPILEMINRYLPKMEYIYAATRVTDIRNKTVEQLKSLKEMGLREISLGIESGDDFTL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
             + + +  ++ +   H   +         +  +     +        +         + 
Sbjct: 139 ERINKGYTYADILEQCHKLEDAGIDYWMTFLNGVAGREHSHAHAVNSAKIFSQCKPMLVG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              LT+  GT   K    G+     E   +          + + 
Sbjct: 199 TGGLTLFPGTPLLKEAHRGEFTPLPEKEMLIELKTFVENLTCYC 242


>gi|226939225|ref|YP_002794296.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Laribacter
           hongkongensis HLHK9]
 gi|226714149|gb|ACO73287.1| MiaB [Laribacter hongkongensis HLHK9]
          Length = 443

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 78/237 (32%), Gaps = 19/237 (8%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEPQ 87
           C  YC F              +   LTE+  + Q           ++    G  +  E  
Sbjct: 156 CSKYCTFCVVPYTRGEEVSRPLNDVLTEVAGLAQQGVKEITLLGQNVNAYRGAMADGEIA 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A +L+ + +   V      T  ++P          Y +    V+ + L VQS  ++ L
Sbjct: 216 DFACLLECVHEIPGVERIRFTT--SHPREFTPRIIDCYARLPKLVSHLHLPVQSGADRVL 273

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R + A E  + I    A      +S D I   P +T   +E   +       D   
Sbjct: 274 AAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETDEDFEKTRKLVEELEFDASF 333

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT            LP +          Q++T       +EI N S +G
Sbjct: 334 VFIYSPRPGTPAA--------DLPDDTPHEVKVKRLQTLTELLDRKTFEI-NQSMVG 381


>gi|210608522|ref|ZP_03287898.1| hypothetical protein CLONEX_00077 [Clostridium nexile DSM 1787]
 gi|210153013|gb|EEA84019.1| hypothetical protein CLONEX_00077 [Clostridium nexile DSM 1787]
          Length = 310

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 13/206 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C              +   S   ++   + L   +   S    +F   T +      
Sbjct: 47  CIFCS----AGGSGDFAGDRNVSIKEQISDGKSLVQRKHTGSSYIAYFQAYTNTYAPVSY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I     +   V     ++I   P  +  +      +    +   I LG+Q++ E+S 
Sbjct: 103 LEQIFMEALQEPDVK---VLSIATRPDCLSDDILDLLNRLNQIKPVWIELGLQTIHEKSA 159

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            F+ R +  S    A+    +I   +    I  LP +T       +       +  + L 
Sbjct: 160 EFIRRGYPLSMFERAVTQLHHIGIPVIVHTILCLPNETKQMMLDTISYLNRLPIQGIKLQ 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L I K T   K ++     LPS   
Sbjct: 220 LLHILKHTDLAKSYEQSPFWLPSLEE 245


>gi|302392275|ref|YP_003828095.1| 30S ribosomal protein S12P methylthiotransferase [Acetohalobium
           arabaticum DSM 5501]
 gi|302204352|gb|ADL13030.1| SSU ribosomal protein S12P methylthiotransferase [Acetohalobium
           arabaticum DSM 5501]
          Length = 442

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 13/227 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R K+            ++   Q     +I +         L    
Sbjct: 154 CNNCCSYC--VIPELRGKLHSREIEDIVTEAVELADQGVKEVNIIAQDITKYGSDLYGEP 211

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +L  + K   +       + A P+       +   K     N I L +Q ++++  
Sbjct: 212 RLVELLTELMKVKGIKW--FRLLYAYPNDFSDELIEVMAKHERICNYIDLPIQHVDDKIR 269

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R     + ++ I   R+  P +S    LI   P +T  +++  L        D L 
Sbjct: 270 SKMRRRGTKEDILSLIRKLRDRIPGISIRTSLIVGFPGETEDEFKNLLDFVQQARFDRLG 329

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++  + E+GT   +M         +E +  + Y     +     L  
Sbjct: 330 VFTYSREEGTAAAEMPDQV-----AEEIKEERYERIMDLQQRISLER 371


>gi|299144078|ref|ZP_07037158.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518563|gb|EFI42302.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 480

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 17/205 (8%)

Query: 22  YVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSI--FF 76
           YV+  + C   C +C     +  Y  G+E        + E++ + +  G + ++ +    
Sbjct: 191 YVNIMYGCNNFCTFC-----IVPYTRGREQSRDPRDIIREIELLAK-NGTKEVTLLGQNV 244

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
                +L +P + A +L  I +   +       + ++P  +       YR      N + 
Sbjct: 245 NSYGKNLQKPISFANLLYRINEIDGIDRIRF--MTSHPKDISDELIYAYRDLDKLCNFLH 302

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L VQS   + L+ + R ++  + +  I   + + P ++   DL+   P +T   +   + 
Sbjct: 303 LPVQSGSSRILKLMNRKYSKEDYLKKIDKIKTVNPNIALCTDLMVGFPGETEEDFMETID 362

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYK 217
                  D    +  +  +GT   K
Sbjct: 363 LVKKVQYDTSFTFIYSKREGTFAAK 387


>gi|229163747|ref|ZP_04291692.1| hypothetical protein bcere0009_45130 [Bacillus cereus R309803]
 gi|228619714|gb|EEK76595.1| hypothetical protein bcere0009_45130 [Bacillus cereus R309803]
          Length = 319

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 27/214 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF          +++ I  +    + MR         +
Sbjct: 42  CPNRDGTVAYGGCTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA 95

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGV 130
            +F   T +      + ++ +           V ++I   P  +            K   
Sbjct: 96  -YFQAYTNT---HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVEYLADLNKRTY 151

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             + LG+Q++ E++   + R H+    +  ++  R    R+   +I  LP +        
Sbjct: 152 LWVELGLQTVHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMET 211

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            +      V  + ++ L + K T   K ++ G L
Sbjct: 212 AREVAKLDVQGIKIHLLHLLKRTPMVKQYEKGQL 245


>gi|16079597|ref|NP_390421.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221310468|ref|ZP_03592315.1| hypothetical protein Bsubs1_13906 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314791|ref|ZP_03596596.1| hypothetical protein BsubsN3_13822 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319714|ref|ZP_03601008.1| hypothetical protein BsubsJ_13743 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323991|ref|ZP_03605285.1| hypothetical protein BsubsS_13877 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1730990|sp|P54462|YQEV_BACSU RecName: Full=Putative methylthiotransferase yqeV
 gi|1303812|dbj|BAA12468.1| YqeV [Bacillus subtilis]
 gi|1890061|dbj|BAA12080.1| YqeV [Bacillus subtilis]
 gi|2634989|emb|CAB14485.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291484990|dbj|BAI86065.1| hypothetical protein BSNT_03787 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 451

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 71/230 (30%), Gaps = 10/230 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L  +         + I+     S +     +   ++   VN + + +QS     L
Sbjct: 210 NFAKLLSELDTRVEGVKRIRIS-SIEASQITDEVIEVLDRSDKIVNHLHIPIQSGSNTVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        ++  +       ++ D+I   P +T  ++         +    L 
Sbjct: 269 KRMRRKYTMEFFADRLNKLKKALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSELH 328

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D     +N  V          +      YE 
Sbjct: 329 VFPYSKRTGTPAARMEDQVDEN--VKNERVHRLIALSDQLAKEYASQYEN 376


>gi|83942143|ref|ZP_00954605.1| MiaB-like tRNA modifying enzyme [Sulfitobacter sp. EE-36]
 gi|83847963|gb|EAP85838.1| MiaB-like tRNA modifying enzyme [Sulfitobacter sp. EE-36]
          Length = 418

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVDQIKRLVDKGFNEVVLTGVDLTSWGADL 200

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 201 PATPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSL 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+   
Sbjct: 256 QHGDDMILKRMKRRHLRDDAIRFAQEARKLRPDMTFGADIIAGFPTETDAMFENSLKLVT 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
              +  L ++  +  +GT   +M 
Sbjct: 316 DCDLTWLHVFPYSAREGTPAARMP 339


>gi|83953198|ref|ZP_00961920.1| MiaB-like tRNA modifying enzyme [Sulfitobacter sp. NAS-14.1]
 gi|83842166|gb|EAP81334.1| MiaB-like tRNA modifying enzyme [Sulfitobacter sp. NAS-14.1]
          Length = 418

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVDQIKRLVDKGFNEVVLTGVDLTSWGADL 200

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 201 PATPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSL 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+   
Sbjct: 256 QHGDDMILKRMKRRHLRDDAIRFAQEARKLRPDMTFGADIIAGFPTETDAMFENSLKLVT 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
              +  L ++  +  +GT   +M 
Sbjct: 316 DCDLTWLHVFPYSAREGTPAARMP 339


>gi|332880703|ref|ZP_08448376.1| iron-only hydrogenase maturation rSAM protein HydE [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332681337|gb|EGJ54261.1| iron-only hydrogenase maturation rSAM protein HydE [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 382

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N    RY++ QE  +       +            +    GG    
Sbjct: 93  WCRNNCYYCGLRRSNRFASRYRLSQEQILDCCREGARL--------GFGTFVLQGGEDGE 144

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   I  ++  +   +         I  +    +   ++ +R AG +R  L  ++  E 
Sbjct: 145 QDEDWIEELVGKLRAEFP-----GHAITLSVGERDGEVYRRWRDAGADRYLLRHETRNEA 199

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  R  + +     +   + +  +    ++   P QT      ++        + +
Sbjct: 200 HYALLHPREMDGARRRECLRTLKALGYQTGAGMMVGSPGQTWDCLLDDIAFLEELEPEMI 259

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F +  
Sbjct: 260 GMGPFVPAAHTPFARHP 276


>gi|299138055|ref|ZP_07031235.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599985|gb|EFI56143.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 515

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 69/227 (30%), Gaps = 19/227 (8%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC D   + RR+       + + L  +    +++    + S F          P
Sbjct: 205 CPYACNYCTDMVVYKRRFNAYAAEHVVAELVGLVKQYRISNVALLDSNF----------P 254

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++   +               T +A+   +     +  Q    +GV+ +  G +S  + 
Sbjct: 255 VDLRRAIAIAQGIRDSGVKFTWTFQASTDFICRMSQDEVQLLADSGVSYMGFGTESTSKA 314

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA--VD 200
            L+ +  R+    E       A     R++F+LI   P +T        +          
Sbjct: 315 VLKLMNKRHQRVDEMYETARKASLAGIRVTFNLILGYPGETEQDRLETFRTMSDIGRQFP 374

Query: 201 HLSLYQ--LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           ++       T   G   +   ++  +V P          L  +    
Sbjct: 375 NVRFSPNIFTPYPGIPIWPQLRELGVVEPQTLEDWMTMPLGANFLPW 421


>gi|295110088|emb|CBL24041.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus obeum
           A2-162]
          Length = 478

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ +++L        +  G        +L
Sbjct: 196 CNNFCSYC-----IVPYVRGRERS-REPEAIVKEVKRLVADGVSEVMLLGQNVNSYGKTL 249

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L+ +     +       + ++P  +     +   K+    + + L +QS  
Sbjct: 250 EHPVTFAQLLEMLEDVEGLKRIRF--MTSHPKDLSDELIETMAKSKKICHHLHLPLQSGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++  + +  +   R   P +S   D+I   P +T   +   L        
Sbjct: 308 SRILKIMNRCYDKEKYLNLVEKIRKAIPDISLTTDIIVGFPGETEEDFRETLDVVAKCGY 367

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +    T    M
Sbjct: 368 DTAFTFLYSKRSDTPAAAM 386


>gi|282878786|ref|ZP_06287554.1| radical SAM domain protein [Prevotella buccalis ATCC 35310]
 gi|281299177|gb|EFA91578.1| radical SAM domain protein [Prevotella buccalis ATCC 35310]
          Length = 479

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 82/245 (33%), Gaps = 21/245 (8%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F     + K      +   L E+  +      R +  +        L+
Sbjct: 170 CPHHCDFCYKDAFY---GKGKSFYTQKVDDALAEIDRL----PGRHLYFLDDH-----LL 217

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P+  + + DG+     V  +           +  N  +   +AG+  + LG ++   +
Sbjct: 218 GNPRFASELFDGMRGMGRVFQSAATVASV----LNGNLIEKAAEAGLRSLFLGFETFSPE 273

Query: 144 SLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +LR   +  N + + +AA+     +   ++   ++ L       +   +   + +++   
Sbjct: 274 NLRSSNKLQNLSKDYVAAVERLHRLGIMINGSFVFGLDHDDKDVFHRTVDWGIEHSITTA 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           + + LT   GT  ++  +    +   +    D   +             +  + ++    
Sbjct: 334 TFHILTPYPGTRLFQQMERDGRITSHDWSKYDTRTVVYKTMGLSTEELKQGYDWAYREFY 393

Query: 263 SLHNL 267
           S  N+
Sbjct: 394 SWKNI 398


>gi|254491697|ref|ZP_05104876.1| radical SAM domain protein [Methylophaga thiooxidans DMS010]
 gi|224463175|gb|EEF79445.1| radical SAM domain protein [Methylophaga thiooxydans DMS010]
          Length = 503

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 72/200 (36%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C         K      +  FL EM+ +      R + +  F   T + ++  
Sbjct: 176 CPFKCEFC----LSALDKTATPFLLDPFLDEMEKL----WQRGVRNFKFIDRTFN-LKVT 226

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               IL+   +    S ++ +  E  P ++        ++      +  +G+Q+ +    
Sbjct: 227 TSIRILEFFLERM--SDDLYLHFEVVPDNLPDKLKDVLKRFPPQSLQFEIGIQTFDPAIQ 284

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R  N ++    I   R      +  DLI+ LP  T+  +     + ++     + L
Sbjct: 285 TLISRKQNNAKTCENIRWLREHTGAHLHTDLIFGLPSDTLDNFADSFDQLVALNPHEIQL 344

Query: 205 YQLTIEKGTLFYKMHKDGDL 224
             L   +G    +  +D DL
Sbjct: 345 GILKRLRGAPLNRHTEDYDL 364


>gi|123966699|ref|YP_001011780.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9515]
 gi|229890602|sp|A2BY12|MIAB_PROM5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123201065|gb|ABM72673.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9515]
          Length = 464

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 75/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  + ++  +E+Q + Q    + I+ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPKAIKSEIQTLAQ-NNYKEITLLGQNIDAYGRDLPV 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     I     +P        +   +         +  Q
Sbjct: 226 TTKEGRKENTLTDLLYFIHDVDGIRRIRFSTSHPKYFSKRLIKACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ LR + R +   +    I   R++ P  S   D I A P +T  Q++  L+    
Sbjct: 286 SGNDEILRLMARGYTIDKYKKIIENIRSLMPNASITADAIVAFPGETEKQYQDTLRLISD 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D +     +    T       +  +    +   +   N     TS      Y
Sbjct: 346 VGFDQVMTAAYSPRPNTP--AAIWNNQIAEEVKKERLKEINELVEATSRKRNQRY 398


>gi|294673381|ref|YP_003573997.1| MiaB family RNA modification enzyme [Prevotella ruminicola 23]
 gi|294472539|gb|ADE81928.1| RNA modification enzyme, MiaB family [Prevotella ruminicola 23]
          Length = 462

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 74/253 (29%), Gaps = 15/253 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +        G + I       G       +
Sbjct: 181 CDYFCTYC---TIPYARGFSRNPTIASLVAQ-AQEAAAEGGKEIVLTGVNIGDFGKTTGE 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
               ++  +     +      ++E  P  +     +   K  A +    + +QS     L
Sbjct: 237 KFIDLVKALDGVEGIQRYRISSLE--PDLISDELIEYCAKSRAFMPHFHIPLQSGSNTVL 294

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+++       IH  + + P   +  D++     +T   +E       S  V  L 
Sbjct: 295 KLMHRHYDRELFAEKIHRIKELMPDAFIGVDVMVGCRGETPECFEETYTFLDSLDVTQLH 354

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT    +          + V          T +    +     E+       
Sbjct: 355 VFPYSERPGTSALSIPYVVPEKEKKQRVKRLLELSDQKTHAFYERYIGQQAEVLFEKATR 414

Query: 261 AESLH--NLNYWR 271
             ++H    NY R
Sbjct: 415 GRAMHGFTKNYIR 427


>gi|114766736|ref|ZP_01445674.1| MiaB-like tRNA modifying enzyme [Pelagibaca bermudensis HTCC2601]
 gi|114541055|gb|EAU44111.1| MiaB-like tRNA modifying enzyme [Roseovarius sp. HTCC2601]
          Length = 417

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ + Q      + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVQKGYNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLGV 137
                     + D + +   ++    + I +   S+E ++      A   R+     L +
Sbjct: 202 GT------PRLGDLVMRILRLTDVPRLRISS-IDSIEADDNLMLAIASEPRLMPHLHLSL 254

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR +   ++F  D+I   P +T   +E  L+   
Sbjct: 255 QHGDDLILKRMKRRHLRDDAIRFTEEARRLRADITFGADIIAGFPTETEAHFENSLKLVE 314

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             ++  L ++  +   GT   K+    D
Sbjct: 315 ECSLTWLHVFPYSSRPGTPAAKIPSKVD 342


>gi|222056729|ref|YP_002539091.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221566018|gb|ACM21990.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 473

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 87/259 (33%), Gaps = 40/259 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ---------WMRQLTGPRSISSIFFGG 78
           C   C +C  +S  +         + + L E++             L G R  ++  F G
Sbjct: 170 CPHHCNFCYKDSFFQGGASFYTQRVDAALAEIESLPGRHLYFLDDHLLGDRHFAANLFDG 229

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
                         + G+ + +  ++ V+  +E        +  +   +AG+  I +G +
Sbjct: 230 --------------MRGMNRLFQGAATVDSILEG-------DLIERAVEAGLRSIFIGFE 268

Query: 139 SLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S++ ++L+   +  N   +    I    ++   ++   ++ L       +      A+  
Sbjct: 269 SIDPRNLQASNKRQNLGRDYDRVIRRLDDLGVFINGSFVFGLDSDGPDIFRRTASWAIER 328

Query: 198 AVDHLSLYQLTIEKGTLFYK--------MHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +   + + LT   GT  ++           D DL      V          + + + L 
Sbjct: 329 GITTATFHILTPYPGTALFRTLDGDGRIQSSDWDLYDTRHVVYQPKGMTADQLKAGYDLA 388

Query: 250 AYEISNH-SFLGAESLHNL 267
             E     S L A S H+L
Sbjct: 389 YREFYRWGSILKASSAHSL 407


>gi|254501602|ref|ZP_05113753.1| MiaB-like tRNA modifying enzyme [Labrenzia alexandrii DFL-11]
 gi|222437673|gb|EEE44352.1| MiaB-like tRNA modifying enzyme [Labrenzia alexandrii DFL-11]
          Length = 422

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 72/205 (35%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +   +  +  +++L        +  G    S    +
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPMGV-VIDQIKRLVDNGYNEIVLTGVDITSYGADL 199

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             +       A IL  +     +  +   +IEA     + +  Q        +    L +
Sbjct: 200 PGEPKLGTLTAKILKMVPDLKRLRLSSIDSIEA-----DEDLMQVIADDHRLMPHFHLSL 254

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   + I      R + P + F  D+I   P +T   +   L+   
Sbjct: 255 QAGDDMILKRMKRRHLRGDTIKFCEDVRKMRPDVVFGADIIAGFPTETEEMFLNSLKIVD 314

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +   GT   +M +
Sbjct: 315 ECGLTHLHVFPFSPRPGTPAARMPQ 339


>gi|146284073|ref|YP_001174226.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas stutzeri
           A1501]
 gi|145572278|gb|ABP81384.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas stutzeri
           A1501]
          Length = 406

 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 74/264 (28%), Gaps = 24/264 (9%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +             +          ++      G
Sbjct: 117 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPLADVLAEIVHLAENGVKEVTLLGQNVNG 174

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
                    +     D +     +     I     +P        Q +      V  + L
Sbjct: 175 YR------HDGHDFADLLHAVAAIDGIGRIRYTTSHPLEFSDAIIQAHADIPQLVKYLHL 228

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQ+  ++ L  + RNH A E  + I   +   P +  S D I   P +T   +E  ++ 
Sbjct: 229 PVQAGSDRILAAMKRNHTALEYKSRIRRLKAAVPDILISSDFIVGFPGETDKDFEQTMKL 288

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL----- 248
                 D    +  +   GT    +  D    +  + +A+    + Q             
Sbjct: 289 IEDVGFDFSYSFVYSARPGTPAADLADDTPEEVKKQRLAILQQRINQQGFENSRRMVGTT 348

Query: 249 HAYEISNHSFLG-----AESLHNL 267
               +S++S          + HN 
Sbjct: 349 QRILVSDYSKKDPGMLQGRTEHNR 372


>gi|325298142|ref|YP_004258059.1| MiaB-like tRNA modifying enzyme [Bacteroides salanitronis DSM
           18170]
 gi|324317695|gb|ADY35586.1| MiaB-like tRNA modifying enzyme [Bacteroides salanitronis DSM
           18170]
          Length = 471

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 13/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I   + + + + +  G + I       G       +
Sbjct: 192 CDYFCSYC---TIPFARGRSRNGKIADLVEQARQVAE-EGGKEIVLTGVNIGDFGKTTGE 247

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + K   +      +IE  P+ +           K  +    + +QS  ++ L
Sbjct: 248 TFFSLVQALDKVEGIERYRISSIE--PNLLTDEIIAFVAQSKRFMPHFHIPLQSGCDEVL 305

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++     + +H  ++  P   +  D+I     +T   +E   +      V  L 
Sbjct: 306 KLMRRRYDTQLFASKVHTIKSYMPDAFIGVDVIVGTRGETPEYFEKAYEFIQGLDVTQLH 365

Query: 204 LYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  +   GT   K+       D    S+ +       T +  + H
Sbjct: 366 VFSYSERPGTQALKIDYVVSPEDKHARSQRLLALSEEKTHAFYARH 411


>gi|312127957|ref|YP_003992831.1| miab-like tRNA modifying enzyme ylig [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777976|gb|ADQ07462.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 440

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 70/205 (34%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + +  +    + ++    +    +    I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGKYTSRPIEDIVKEAKELAEKGYQEIVLTAQDTTKYGTD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ + K   +     +   + P  V+ N  +  + +   VN   + +Q +
Sbjct: 209 LYGKKMLHALLEELEKIEKIKWIRFLY--SYPEDVDENLIEVVKSSSKIVNYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKTTKEGIKRLIEKIRRSFDEVIIRTTVLVGFPTETDEEFEELCSFLKWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L  +  + E+GTL  ++ +  D
Sbjct: 327 FDRLGAFMYSQEEGTLASQLPQVDD 351


>gi|255505363|ref|ZP_05345671.3| RNA modification enzyme, MiaB family [Bryantella formatexigens DSM
           14469]
 gi|255268564|gb|EET61769.1| RNA modification enzyme, MiaB family [Bryantella formatexigens DSM
           14469]
          Length = 446

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 69/206 (33%), Gaps = 24/206 (11%)

Query: 28  CVKKCPYC-------DFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S    R     E      + E+  + Q T    +        
Sbjct: 155 CDKHCTYCIIPQIRGNFRSVPMERLLAQAEELAGGGVRELILVAQETTLYGVD------- 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
              L   +++ L+L  + K   +       +   P  +     +  R  K   + + L +
Sbjct: 208 ---LYGKKSLHLLLQELCKIKGIRWIR--ILYCYPEEIYEELIETIRTEKKICHYLDLPI 262

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRAL 195
           Q    + L+ +GR  +  +    IH  R   P ++    LI   P +T    E  +    
Sbjct: 263 QHASNRILKRMGRRTSREQLAEIIHKLRREIPDIALRTTLISGFPGETQEDHEELMAFVD 322

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               D L ++  + E+GT    M   
Sbjct: 323 EMEFDRLGVFPYSQEEGTPAAAMPDQ 348


>gi|126699594|ref|YP_001088491.1| putative radical SAM protein [Clostridium difficile 630]
 gi|254975583|ref|ZP_05272055.1| putative radical SAM protein [Clostridium difficile QCD-66c26]
 gi|255092971|ref|ZP_05322449.1| putative radical SAM protein [Clostridium difficile CIP 107932]
 gi|255101116|ref|ZP_05330093.1| putative radical SAM protein [Clostridium difficile QCD-63q42]
 gi|255306984|ref|ZP_05351155.1| putative radical SAM protein [Clostridium difficile ATCC 43255]
 gi|255314712|ref|ZP_05356295.1| putative radical SAM protein [Clostridium difficile QCD-76w55]
 gi|255517386|ref|ZP_05385062.1| putative radical SAM protein [Clostridium difficile QCD-97b34]
 gi|255650493|ref|ZP_05397395.1| putative radical SAM protein [Clostridium difficile QCD-37x79]
 gi|306520455|ref|ZP_07406802.1| putative radical SAM protein [Clostridium difficile QCD-32g58]
 gi|123363359|sp|Q187U6|MIAB_CLOD6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|115251031|emb|CAJ68861.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           (tRNA-i(6)A37 methylthiotransferase) [Clostridium
           difficile]
          Length = 478

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +    +  + E+ + +   T   ++          +L  P
Sbjct: 194 CNNFCTYC---IVPYTRGRERSRTPEDIINEIKELVANGTKEITLLGQNVDSYGKTLENP 250

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + + +L  +     +       + ++P  +        R        + L +Q      
Sbjct: 251 VSFSELLRKVNDIEGIERVRF--MTSHPKDISDEVIYAIRDCDKVCEFLHLPIQCGSSSL 308

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++     +  I  A+   P +  S DL+   P +T       L        D  
Sbjct: 309 LKKMNRHYTKEYYLEIIEKAKKEVPGIAFSTDLMIGFPGETEEDLLDTLDVVEKVRYDSA 368

Query: 203 SLYQLTIEKGTLFYKM 218
             +  +  +GT   KM
Sbjct: 369 FTFIYSKRQGTPAAKM 384


>gi|288928957|ref|ZP_06422803.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288329941|gb|EFC68526.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 440

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C YC            +   + S L E++ ++Q          ++++S  F     
Sbjct: 155 CDNFCHYC---IVPYTRGRERSRDVDSILNEVRNLQQQGYKEVTLLGQNVNSYQFVNEEG 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             I+   +  ++        +  +       +P  +     +   +       I L +QS
Sbjct: 212 QTIDFPQLLRLVAEAVPTMRIRFST-----PHPKDMSDATLRVIAEVPNVCRHIHLPIQS 266

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R +     ++ +   R + P   +S D+      +T    E  L+     
Sbjct: 267 GSDKVLKLMNRKYTVEWYLSRVKAIRELVPDCGLSTDIFVGYHGETEADHEESLRIMREV 326

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             D   +++ +   GT   K
Sbjct: 327 GYDSAFMFKYSERPGTYASK 346


>gi|255561612|ref|XP_002521816.1| radical sam protein, putative [Ricinus communis]
 gi|223539029|gb|EEF40626.1| radical sam protein, putative [Ricinus communis]
          Length = 630

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSLEE 142
           N+  +L+ I       ++  + I        + + +   +        + + + VQS  +
Sbjct: 261 NLPRLLNAIVSELPADASTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSD 320

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R +  S     +     +    +++ D+I   P +T   +   +     Y + 
Sbjct: 321 NVLNAMNREYTVSNFRTVVDTLTELVPGMQIATDIICGFPGETDDDFAQTVSLINEYKLP 380

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + + Q     GT   +M
Sbjct: 381 QVHISQFYPRPGTPAARM 398


>gi|167772333|ref|ZP_02444386.1| hypothetical protein ANACOL_03710 [Anaerotruncus colihominis DSM
           17241]
 gi|167665436|gb|EDS09566.1| hypothetical protein ANACOL_03710 [Anaerotruncus colihominis DSM
           17241]
          Length = 441

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC      +     +         E++ + +     ++     G   PS    +
Sbjct: 152 CDRYCAYC---IIPQARGPVRSKPPGELRAELEGLARAGYREAV---LVGINLPSY-GRE 204

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               ++D +     V     + +    P  +  ++     +      +  L +QS  + +
Sbjct: 205 LGLRLIDAVELACAVGGIERVRLGSLEPELLTDDDIARMARQPKLCPQFHLSLQSGCDAT 264

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R+++ +E +  +   R  F    ++ D++   P +T  ++   L    S  +   
Sbjct: 265 LARMRRHYDTAEYMRIVRALRAHFENCAITTDVMVGFPGETDAEFGQSLCFVESLGLAKA 324

Query: 203 SLYQLTIEKGTLFYKMH 219
            ++  +   GT    M 
Sbjct: 325 HVFAYSRRPGTRAADMP 341


>gi|297583797|ref|YP_003699577.1| radical SAM domain-containing protein [Bacillus selenitireducens
           MLS10]
 gi|297142254|gb|ADH99011.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
          Length = 583

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 4/141 (2%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQSLRFLG 149
           +D            +   E     +         +    G+ R  +GVQS  + + R + 
Sbjct: 241 MDMFRFLIDNHQGCQFQFEITGDIMRPEVLDYLNEHAPPGMFRFEIGVQSTNDHTNRIVE 300

Query: 150 RNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R  N ++    I   +         DLI  LP++    ++       +   + L L  L 
Sbjct: 301 RRQNFNKLSRTIQKIKEGGKIDQHLDLIAGLPEENYESFKQTFNDVFALHPEELQLGFLK 360

Query: 209 IEKGTLFYKMHKDGDLVLPSE 229
           + +GT   +  K+ +      
Sbjct: 361 MLRGTGMRQRAKEFNYAYMDH 381


>gi|123969036|ref|YP_001009894.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str.
           AS9601]
 gi|229890604|sp|A2BSM6|MIAB_PROMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123199146|gb|ABM70787.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str.
           AS9601]
          Length = 464

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 74/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  +  +  +E+Q +      + I+ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPNAIKSEIQKLAG-DNFKEITLLGQNIDAYGRDLPG 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     I     +P        Q   +         +  Q
Sbjct: 226 TTKEGRKENTLTDLLYYIHDVKGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R +   +    I   R++ P   ++ D I A P +T  Q++  L+    
Sbjct: 286 SGNDEILKQMSRGYTIKKYKNIIENIRSLMPDASITADAIVAFPGETEKQYQDTLKLITE 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D ++    +    T          L    +   +   N     T+      Y
Sbjct: 346 IGFDQVNTAAYSPRPNTP--AAVWSNQLSEEVKKARLQEINDLVEKTARSRNKRY 398


>gi|15837508|ref|NP_298196.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
           fastidiosa 9a5c]
 gi|81547885|sp|Q9PEX2|MIAB_XYLFA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|9105825|gb|AAF83716.1|AE003930_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 497

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +++  T +       +V     C K   YC F               +  LTE+  +
Sbjct: 178 IEKFDHLPTPRAEGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPFEDVLTEIAHL 233

Query: 63  RQLTGPRSISSI-----FFGGGT---------PSLIEPQNIALILDGIAKNWTVSSNVEI 108
               G R I+ +      + G           P+     ++ L++  IA+  ++      
Sbjct: 234 ATQ-GVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFT 292

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           T  ++P     +  + YR      N + L VQS  ++ L  + R + A E  + I   R 
Sbjct: 293 T--SHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRA 350

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + P +S   D I   P ++ T ++  +Q       D    +  +   GT    +   
Sbjct: 351 VRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDH 407


>gi|71898877|ref|ZP_00681044.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Xylella fastidiosa Ann-1]
 gi|71731289|gb|EAO33353.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
           enzyme MiaB [Xylella fastidiosa Ann-1]
          Length = 497

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 83/237 (35%), Gaps = 26/237 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +++  T +       +V     C K   YC F               +  LTE+  +
Sbjct: 178 IEKFDHLPTPRAEGP-SAFVSIMEGCSK---YCSFCVVPYTRGEEVSRPFEDVLTEIAHL 233

Query: 63  RQLTGPRSISSI-----FFGGGT---------PSLIEPQNIALILDGIAKNWTVSSNVEI 108
               G R I+ +      + G           P+     ++ L++  IA+  ++      
Sbjct: 234 ATQ-GVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFT 292

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
           T  ++P     +  + YR      N + L VQS  ++ L  + R + A E  + I   R 
Sbjct: 293 T--SHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRA 350

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + P +S   D I   P ++ T ++  +Q       D    +  +   GT    +   
Sbjct: 351 VRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDH 407


>gi|296333299|ref|ZP_06875752.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305675196|ref|YP_003866868.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149497|gb|EFG90393.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305413440|gb|ADM38559.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 451

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 71/230 (30%), Gaps = 10/230 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L  +         + I+     S +     +   ++   VN + + +QS     L
Sbjct: 210 NFAKLLSELDTRVEGVKRIRIS-SIEASQITDEVIEVLDRSDKIVNHLHIPIQSGSNTVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        ++  +       ++ D+I   P +T  ++         +    L 
Sbjct: 269 KRMRRKYTMEFFADRLNKLKKALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSELH 328

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D     +N  V          +      YE 
Sbjct: 329 VFPYSKRTGTPAARMEDQVDEN--VKNERVHRLIALSDQLAKEYASQYEN 376


>gi|291165667|gb|EFE27715.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
          Length = 288

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 84/220 (38%), Gaps = 18/220 (8%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CD    + + KV Q   ++  L + +  R       +  IF   G   +++ 
Sbjct: 25  CSHNKCTFCD----MYKDKVFQVRKVEDILQDFREARSYYPY--VRRIFLADGDALIMKT 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  IL+ I +N        + + A+P S+    V   +   + G+    +G++S  ++
Sbjct: 79  EQLVQILEHIQEN--FPECERVAVYASPYSIKSKTVEELKLLHQKGLGIGYIGLESGSDR 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE----MELQRALSYAV 199
            L+ + +N  ++E I      +     +S   I  L    +  W        +   +   
Sbjct: 137 ILKKINKNVTSAETIECGLKLKEAGIAVSVTAISGLGG--IEYWREHAVETGKAFSAMNP 194

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +++ L  L +   T   K  ++G   + +    +    L 
Sbjct: 195 EYIGLLTLFMRGDTPLKKEFEEGKFHILTPEEIMMESMLM 234


>gi|225570522|ref|ZP_03779547.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM
           15053]
 gi|225160719|gb|EEG73338.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM
           15053]
          Length = 441

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S      V +   +    + E+  + Q T   ++      G 
Sbjct: 154 CDKHCTYCIIPKIRGNFRSVPMERLVKEAEALAEQGVKELILVAQET---TLYGKDIYG- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  +++  +L  +     +       +   P  +     Q  ++     + + L +
Sbjct: 210 ------EKSLHRLLRKLCGIEGLRWIR--ILYCYPEEIYDELIQVIKEEKKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  +  + I  +   R   P ++    LI   P +T+ Q E  ++   
Sbjct: 262 QHANDDILKRMGRRTDKKQLIEIVGKLRKEIPDITLRTTLITGFPGETIKQHEELMEFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             A + L ++  + E+ T    M       +   +   +L  L Q I
Sbjct: 322 EMAFERLGVFTYSPEEDTPAASMPDQIPEEI-KSDRQAELMELQQDI 367


>gi|169630131|ref|YP_001703780.1| putative tRNA-i(6)A37 modification enzyme MiaB [Mycobacterium
           abscessus ATCC 19977]
 gi|229890563|sp|B1MD05|MIAB_MYCA9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169242098|emb|CAM63126.1| Putative tRNA-i(6)A37 modification enzyme MiaB [Mycobacterium
           abscessus]
          Length = 507

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 84/233 (36%), Gaps = 17/233 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQ 53
           ++ L  + + +     ++   +V     C   C +C           + R        +Q
Sbjct: 138 VEALEHFPSALPATRESAYAAWVSISVGCNNTCTFCIVPSLRG--KEIDRRPGDILGEVQ 195

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           + + +      L G +++++       P +  P++     + +     +     +     
Sbjct: 196 ALVDQGVLEVTLLG-QNVNAYGVNFADPEI--PRDRGAFAELLRACGRIDGLERVRFTSP 252

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +      ++ + +QS  ++ L+ + R++ +   ++ I   R+  P 
Sbjct: 253 HPAEFTDDVIEAMAQTPNVCPQLHMPLQSGSDRILKAMRRSYRSERFLSIIDKVRSAMPD 312

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++ D+I   P +T   ++  L+            +Q +I  GT   K+   
Sbjct: 313 AAITTDIIVGFPGETEEDFQQTLEVVRRARFSSAFTFQYSIRPGTPAAKLPDQ 365


>gi|110598221|ref|ZP_01386497.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
 gi|110340136|gb|EAT58635.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
          Length = 469

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 78/237 (32%), Gaps = 15/237 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  +   L EM++ ++      I+  F          PQ
Sbjct: 207 CPVGCNFCTTPTIYGKNYRYRE--LDLVLDEMRYHQKRLNKEKINFSFMDDNI--SFRPQ 262

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +AK       V      + + ++         ++G + +S+G +SL  ++L+
Sbjct: 263 YFMTLLEEMAKL-----GVHWNANISMNFLDKPEVAELAGRSGCDLLSIGFESLNPETLK 317

Query: 147 FLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N        +         +    ++     T   +++     +   ++     
Sbjct: 318 SVHKGSNRLGNYETVVSNLHKNGIAIQGYFMFGFDNDTEESFQLTYDFIMKNRIEFPVFS 377

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +T   GT ++   K        +      Y    S  S   L    +SN   L  E
Sbjct: 378 LVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPSKMSGEKL----LSNFVKLQKE 430


>gi|307133574|dbj|BAJ19064.1| putative C-methyltransferase [Streptomyces sp. SANK 62799]
          Length = 629

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 84/255 (32%), Gaps = 13/255 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C        +       ++SF    +     L G   + ++F       ++E 
Sbjct: 189 CPYRCSFC-------YWGGATGQRVRSFSRDRLAAELDLFGYHQVPTVFLCDANFGMLEA 241

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQS 144
            +     L  I + +   +++E     N S       +  ++ G  +  +L +Q+L +++
Sbjct: 242 DEEFTDDLLKIHEKYGFPTSLEANWAKNKSQRFHRIVRTLKQNGFKSSFTLALQTLSDEA 301

Query: 145 LRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R     ++                 +LI+  P +T+  +     R     V  ++
Sbjct: 302 LTDMRRRNMKLNQWQDLAEWLAAEGMESFVELIWGAPGETVESFLDGYDRIAE-KVPRIA 360

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH-SFLGAE 262
           +Y L +   T + +  +    V          Y L     S     A +     + +  E
Sbjct: 361 VYPLLLLPNTDYSEQRELHGFVTVRGESDDFEYVLASRSASLAENFAMQRFMFLARILGE 420

Query: 263 SLHNLNYWRYGDYIG 277
           + +    W     + 
Sbjct: 421 NQYFKRLWHPARLLA 435


>gi|296163823|ref|ZP_06846506.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. Ch1-1]
 gi|295885932|gb|EFG65867.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. Ch1-1]
          Length = 432

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 202 CRSKCTFCLWPQTVGGHR-YRTRSVENVLAEVKWIRDNMP--EVREIMFDDDTFTDFKPR 258

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 259 VEEIARGLGQLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 309

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  ++ A       + + 
Sbjct: 310 LNIKKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVS 369

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y  
Sbjct: 370 LAAPYPGTTLYNQ 382


>gi|94987263|ref|YP_595196.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lawsonia
           intracellularis PHE/MN1-00]
 gi|123385040|sp|Q1MQ52|MIAB_LAWIP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|94731512|emb|CAJ54875.1| 2-methylthioadenine synthetase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 457

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 22/220 (10%)

Query: 9   NNMTGQGSNSLGV--YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ- 64
           + +T   +N+L +  YV+    C   C YC            +   +Q+ + E Q +   
Sbjct: 142 SKLTLSNNNTLALMAYVNIMQGCDNYCTYC---IVPYTRGKQKSRSVQAIVEECQQLIDS 198

Query: 65  -------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                  L    +   +     +P+     N A+++  IA    +         A+P   
Sbjct: 199 GVKEIVLLGQNVNAYGLDKDKNSPA--NGVNFAMLVHTIASLPGLERLRFF--SAHPKEF 254

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SF 173
                  + +      R+ L +QS  ++ LR +GR ++  E I+ I   + + P +  S 
Sbjct: 255 SSELIDLFGEFSTLCPRLHLPLQSGSDKILRRMGRKYSMDEYISIITKLKKVRPDIALST 314

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           D I   P +T   +   LQ   +        +  +   GT
Sbjct: 315 DFIVGFPGETEEDFLQTLQSINTIKFMSSFSFCYSDRPGT 354


>gi|320536571|ref|ZP_08036594.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema phagedenis
           F0421]
 gi|320146584|gb|EFW38177.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema phagedenis
           F0421]
          Length = 455

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 63/210 (30%), Gaps = 21/210 (10%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C YC     +  Y  G+E   +S    +  + +L+          G    
Sbjct: 156 IPIMNGCNNFCTYC-----IVPYVRGREIS-RSLEAILAEVEELSEKGVREITLLGQNVN 209

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEIT--------IEANPSSVEVNNFQGYRKAG--VN 131
           S         ++        V+   E          + ++P            +      
Sbjct: 210 SYRGKDFEGKLITFPELLRRVARVCEKKDSIRWIRFMSSHPKDFSDELITVIAEEPRVCK 269

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEM 189
            I L VQ      L+ + R++     ++ +   R   P   +S D++   P ++   +E+
Sbjct: 270 LIHLPVQHGSNAVLKRMNRSYTREHYLSLVDKLRTKVPDSALSTDILIGFPGESEEDFEL 329

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            L        D   +Y     +GT  Y   
Sbjct: 330 TLDLMRQVQFDSAFMYHYNPREGTRAYDFP 359


>gi|313886783|ref|ZP_07820489.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923747|gb|EFR34550.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 454

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +      + +   I S + + + + +L G + I       G       +
Sbjct: 176 CNYYCTYC---TIPAARGISRNGSIASLVAQAERVAEL-GGKEIILTGVNIGDFGRTTGE 231

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
            +  +L  + +   ++     +IE  P  +     Q   +    +    + +QS  +Q L
Sbjct: 232 TLLELLHQLTQVAGIARYRIGSIE--PELLTPEIIQFVAETAQFMPHFHIPLQSGSDQVL 289

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R+++ +     + L   + P   +  D+I  +  +        L          L 
Sbjct: 290 RLMRRHYDTALFAERLKLIYELIPDAFVGVDVIAGMRGELSEHHAETLAFLKEQPWSQLH 349

Query: 204 LYQLTIEKGT 213
           ++  +  KGT
Sbjct: 350 VFPYSERKGT 359


>gi|311108329|ref|YP_003981182.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Achromobacter
           xylosoxidans A8]
 gi|310763018|gb|ADP18467.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Achromobacter
           xylosoxidans A8]
          Length = 477

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    +       Q     ++   +   + G      E 
Sbjct: 183 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVADLADQGVKEVTLLGQNVNAYRGRMTDSDEI 242

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A++L+ + +   +      T  ++P  +       Y +    V+ + L VQ+  ++ 
Sbjct: 243 ADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRV 300

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E  + +   R   P ++   D I   P +T   +E  ++       D  
Sbjct: 301 LAGMKRGYTTLEFKSVVRRLRAARPDLTLSSDFIVGFPGETEEDFEKTMKLIEDVGFDTS 360

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 361 FSFVYSRRPGTP 372


>gi|326791275|ref|YP_004309096.1| radical SAM protein [Clostridium lentocellum DSM 5427]
 gi|326542039|gb|ADZ83898.1| Radical SAM domain protein [Clostridium lentocellum DSM 5427]
          Length = 580

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 70/228 (30%), Gaps = 14/228 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  ++H     V  E         ++   +       +               
Sbjct: 184 CPFNCQYCLSSTHKGVRFVPLERVKIHLTYFLEQRVKQVKFVDRTFNTKKAYA------- 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               I + I  N   S+N     E     ++ +  +  +  + G+ +  +GVQS   + L
Sbjct: 237 --MAIWEHIIANDNGSTN--FHFEIAAELIDDDMLELLKGARNGLIQFEIGVQSTNMKVL 292

Query: 146 RFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R     +        + +       DLI  LP +    +       ++   +   L
Sbjct: 293 EAISRKMPYEDIKEITRKIKALGNIHQHLDLIAGLPYEDYASFRNSFNDVIALRPEQFQL 352

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L + KG+   K  +   L+   E     LY    S      LH+ E
Sbjct: 353 GFLKLLKGSGLRKSAETYGLIYKDEPPYEILYTKEMSFDEMLKLHSIE 400


>gi|290968596|ref|ZP_06560134.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781249|gb|EFD93839.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 442

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 73/249 (29%), Gaps = 19/249 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C K C YC          V      +     ++ + QL           G    S    L
Sbjct: 159 CNKFCTYC------IVPHVRGREVSRPVAEIVREVAQLGKDGYKEVTLLGQNVNSYGLDL 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  +   +++ +     V       + ++P  +              V+ + L +QS  
Sbjct: 213 RDGTDFGTLVEALETVPGVERIRY--MTSHPKDMTPAMIDAIAAGSRVVHHLHLPIQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +     +  I  AR     +    DLI   P +T   ++  LQ       
Sbjct: 271 NAMLKRMNRGYTVEHYLDLIAYARKKMSDLVLTTDLIVGFPGETEAMFQETLQLIRQVGY 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL---HAYEISNH 256
           D    +  +   GT              S  +   +    ++  + +      +YE+   
Sbjct: 331 DMAYTFIYSPRTGTPAATWPDQVAAAEKSRRLQCLMDIQNETSLALNREMEGRSYEVIVE 390

Query: 257 SFLGAESLH 265
                ++ H
Sbjct: 391 GPTKNDARH 399


>gi|222528975|ref|YP_002572857.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455822|gb|ACM60084.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 440

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 18/219 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + +  +    + ++    +    +    I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGKYTSRPIEDIVKEAKELAEKGYQEIVLTAQDTTKYGLD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ + K   +     +   + P  V+ +  +  + +   VN   + +Q +
Sbjct: 209 LYGKKMLHALLEELEKIEKIKWIRFLY--SYPEDVDESLIEVVKSSSKIVNYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKTTKEGIKRLIEKIRRSFDEVIIRTTVLVGFPTETDEEFEELCSFLKWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            D L  +  + E+GTL  ++ +  D V       V    
Sbjct: 327 FDRLGAFMYSQEEGTLASQLPQVDDEVRQRRYEKVLNIQ 365


>gi|167624806|ref|YP_001675100.1| radical SAM domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167354828|gb|ABZ77441.1| Radical SAM domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 296

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 17/233 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGGTPSLIEPQN 88
           KC YC     VR     +   I   + ++Q  ++  +T  + I  +F   G    +    
Sbjct: 29  KCTYCSMYKDVR----YRARDIGELIEDIQMAKRAYVTNIQKIEKVFLSDGDAISLPTSM 84

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +  IL  +       +   ++  A P S            R+AG+    LGV+S  ++ L
Sbjct: 85  LLEILAELYSA--FPNLSHVSTYAGPQSTLSKTEEELTQLRQAGLTMTYLGVESGSDEVL 142

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ---TMTQWEMELQRALSYAVDHL 202
             + +  +A E + A         ++   ++  +  +   + T  +             L
Sbjct: 143 SMIRKGVSAEEMLVAGRNIVASGIKLVAMVMIGIGGRGEISQTHIKETATLINQIKPYLL 202

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
                   +GT+ Y+    G+  L      +    +   +     L A  I  
Sbjct: 203 GTLTTVAIEGTVLYRQVAKGEFNLLDPYEVLKEMKM---LLEHIELPALYIDG 252


>gi|261416265|ref|YP_003249948.1| MiaB-like tRNA modifying enzyme YliG [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261372721|gb|ACX75466.1| MiaB-like tRNA modifying enzyme YliG [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302328140|gb|ADL27341.1| ribosomal protein S12 methylthiotransferase RimO [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 449

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC       +        I +   +++          +  I       +    +
Sbjct: 160 CNRRCAYCAIPLIRGKQDSRSIEDIVAEAKDLEAQG-------VKEITLIAQDTTYFGRE 212

Query: 88  ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                  +  +L  +  N  +     +     P  V+        K    V  + + +Q 
Sbjct: 213 KGKKGGTLVELLRALLDNTNIPWIRMLYW--YPMFVDDELLDLMAKEPRLVKYVDMPIQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + RN+   E +  +H  R   P ++    ++   P +T   +E  ++     
Sbjct: 271 ASDKMLKNMKRNYRKKELVDLLHKIRERIPGVTLRSTVLVGFPGETHEDFEELMELLQDV 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             DHL  +  + E+GT   +M
Sbjct: 331 QFDHLGGFVFSPEEGTPVMEM 351


>gi|330813325|ref|YP_004357564.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486420|gb|AEA80825.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 437

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 27/199 (13%)

Query: 28  CVKKCPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C +C         F+    +     +  + +   E+  + Q         I     
Sbjct: 159 CDKFCKFCVVPYTRGPEFSRCPDQIYNEVQGLVDAGTREIILLGQNVSGYKNKDI----- 213

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                   N++ ++D +A    +      T  ++P+  + +    ++     + ++ L V
Sbjct: 214 --------NLSRLIDKVASIKKLERIRFTT--SHPNDFDEDLINAFKYQDKLMPQLHLPV 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R H     +  I   R+I   +  S D I   P +T   +E  L    
Sbjct: 264 QSGSNKILESMNRKHTREFYLKLIDKFRDIKKDIEFSSDFIVGYPGETDKDFEDTLDLVD 323

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                +   +  +   GT 
Sbjct: 324 KVKFSNSYSFVYSQRPGTP 342


>gi|310814822|ref|YP_003962786.1| MiaB-like tRNA modifying enzyme [Ketogulonicigenium vulgare Y25]
 gi|308753557|gb|ADO41486.1| MiaB-like tRNA modifying enzyme [Ketogulonicigenium vulgare Y25]
          Length = 422

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 77/206 (37%), Gaps = 25/206 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 149 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 203

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLG 136
           +     ++   IL  +     +  +   +IEA+   +                +  + L 
Sbjct: 204 ATPRLGDLVMRILKLVPDLPRLRISSIDSIEADEMLMQAIATEQRL-------MPHLHLS 256

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ +   L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+  
Sbjct: 257 LQAGDNMILKRMKRRHMREDAIRFCEEARVLRPDMTFGADIIAGFPTETEAMFENSLKLV 316

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHK 220
               +  L ++  +  KGT   +M +
Sbjct: 317 QDCGLTWLHVFPYSPRKGTPAARMPQ 342


>gi|221222491|sp|O29021|Y1247_ARCFU RecName: Full=Putative methylthiotransferase AF_1247
          Length = 424

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 27/206 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+ KC +C   +   R ++     +  ++     ++   +     S  +  +G      +
Sbjct: 143 CLGKCSFCA--TKFARGRLRSFSMDAIVREAERAVRAGYREIQLTSQDTGAYGMDKGRAM 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS---------L 135
            P+ +  I           S +E         +   +        +N  S         +
Sbjct: 201 LPELLRKI-----------SEIEGEFRVRVGMMNPQHAVRMLDELINAYSSEKIYKFLHI 249

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS + + L  + RNH   + +  +   RN F    +S D+I   P +T   +    + 
Sbjct: 250 PVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDDVLISTDIIVGFPTETEEAFWKSYEL 309

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D +++ + +  KGT   ++ 
Sbjct: 310 IKETRPDIVNITRYSARKGTPAARLR 335


>gi|86136887|ref|ZP_01055465.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. MED193]
 gi|85826211|gb|EAQ46408.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. MED193]
          Length = 418

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 80/217 (36%), Gaps = 21/217 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  +     +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 202 TTPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     A  + P M+F  D+I   P +T   +E  L+    
Sbjct: 257 HGDDMILKRMARRHLREDAIRFTEEALKLRPEMTFGADIIAGFPTETEAHFENSLKLVED 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +  L ++  +   GT   K+ K  +  +     A 
Sbjct: 317 CQLTWLHVFPYSKRDGTPAAKIPKQVNGNIIKSRAAR 353


>gi|313893403|ref|ZP_07826975.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Veillonella sp. oral
           taxon 158 str. F0412]
 gi|313442044|gb|EFR60464.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Veillonella sp. oral
           taxon 158 str. F0412]
          Length = 438

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++          + +  L    +   + F  GT 
Sbjct: 154 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTDLGAKGFKEITLLGQNVNSYGLDFKDGT- 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 212 ------DFGTLIDALDGIPGIERIRY--MTSHPQDMTKSMIDALGRSSNIVTHLHLPIQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R++        +   R     +    D+I   P +T   ++  LQ     
Sbjct: 264 GSDRILKKMNRHYTVEHYKELLSYCREKIKNVVVTTDIIVGFPGETEEDFQATLQLLKDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 324 RYDMAYTFIYSKRSGTPAATM 344


>gi|296242700|ref|YP_003650187.1| RNA modification enzyme, MiaB family [Thermosphaera aggregans DSM
           11486]
 gi|296095284|gb|ADG91235.1| RNA modification enzyme, MiaB family [Thermosphaera aggregans DSM
           11486]
          Length = 427

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 20/209 (9%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGT 80
            P    C+  C +C    H RR  V   + +++ +  ++   ++      ++ +  G   
Sbjct: 139 IPIQEGCLSNCSFC-ITKHARR--VLVSHTVEAIVKSVETAVRMGAVEIQLTGMDLGTYG 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKA------GVNRI 133
             L   + +  +   + +  T+     + I   NP  +         +A          +
Sbjct: 196 MELYGKRYLPEL---VRRVSTLPGEFRVRIGMINPEHL-PPILDELLEAVKSDRRIYRFL 251

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            + +QS  ++ L+ + R +   E    I   +     +S   D+I   P +    +E  L
Sbjct: 252 HIPLQSGSDKVLKAMNRKYTVDEYRGLIKEVKQKISDVSIATDIIVGHPLEDEEDFEETL 311

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +       + +     ++   TL   M  
Sbjct: 312 KIIRELEFERVHFAGYSVRPNTLSAGMPN 340


>gi|255525804|ref|ZP_05392734.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296186361|ref|ZP_06854765.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255510537|gb|EET86847.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296049162|gb|EFG88592.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 563

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 3/163 (1%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGR 150
           +D       + +      E +   +     +    A   RI    GVQ+   + L+ + R
Sbjct: 243 MDVWKFLTELDTEATFHFEISADILTEEEIKLLSNAPKGRIQFEVGVQTTNNEILKNINR 302

Query: 151 NHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           N N  +    +    +I   +   DLI  LP + +  ++       S   + + L  L +
Sbjct: 303 NVNFEDIREKVEELESIKNIKQHLDLIAGLPGENIKSFKKSFNDVYSIRPEEIQLGFLKL 362

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            KG+   +      +V         L     S      L   E
Sbjct: 363 LKGSPMREEALKWGMVYSPYTPYEILKTKDISYNEIIILKRIE 405


>gi|261416782|ref|YP_003250465.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373238|gb|ACX75983.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327266|gb|ADL26467.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 467

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 69/204 (33%), Gaps = 25/204 (12%)

Query: 28  CVKKCPYCD-------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C+  C +C         +S   +  V Q   +Q+ + +     QLTG        +G   
Sbjct: 182 CLDACAFCSTHLVKGRLHSFAPQTIVDQ---VQALVDDGCLEIQLTGQ---DCACYGFDI 235

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI----SLG 136
            + +  +    IL  +  N+ +   +      NP  V             +RI     + 
Sbjct: 236 GTNL-AELTQRILTHVNGNYRIRLGM-----GNPRHVLSYQEALLNCFTDDRIYKFIHIP 289

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQS  E  L+ + R H A +     H     F +   S DLI   P +T   +   L   
Sbjct: 290 VQSGSENVLKAMNRRHTARDYATLAHAFTERFRKFTLSTDLIVGYPGETAADFNDTLTLL 349

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                   ++ +     GT+  ++
Sbjct: 350 KETRPTVCNITRFVTRPGTVAARL 373


>gi|169335621|ref|ZP_02862814.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258359|gb|EDS72325.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM
           17244]
          Length = 448

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 83/238 (34%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC   S   + +  +       + ++    +    R +  +       G     
Sbjct: 161 CDKHCTYCVIPSIRGKQRSRK-------IEDIVSEAKRLADRGVKELILIAQDVGEYGTD 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ + K  ++       +   P +V       +      +  I + +Q +
Sbjct: 214 LYGERKLPELLEELNKIESIHWIR--VLYIYPETVSDELIDKFVNLDKVLKYIDMPLQHI 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR  +  + +  I   R+     ++    I A P +T    +  L+    Y 
Sbjct: 272 NDNILKKMGRKTSKEDILTLIRKLRSKVNGIKIRSTFITAFPGETEENHKELLEFIKLYQ 331

Query: 199 VDHLSLYQLTIEKGTLFY---KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D +  ++ + E+GT  Y       +         +     ++++ +  ++     E+
Sbjct: 332 LDRVGFFKYSREEGTPAYDMDNQVSEEIKDERYMELMSAQEDVSEELMESYLDKTLEV 389


>gi|170288753|ref|YP_001738991.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga sp. RQ2]
 gi|238055229|sp|B1LAG0|RIMO_THESQ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|170176256|gb|ACB09308.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga sp. RQ2]
          Length = 430

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 36/240 (15%)

Query: 28  CVKKCPYCDFNSH--------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C   S         +       E+ ++    E+  + Q T    I        
Sbjct: 148 CDRGCTFCSIPSFKGSLRSRSIEDITHEVEDLLKEGKKEIILVAQDTTSYGIDLYRKQAL 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                 P  +  +     + W         +  +P  +         +    V    + V
Sbjct: 208 ------PDLLRRLNSLNGEFWIR------VMYLHPDHLTEEIISAMLELDKVVKYFDVPV 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR  ++ E    +   R  FP       +I   P +T   +E   +   
Sbjct: 256 QHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKRFVE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D L  +  + E+GT+ + + +  D              + +       L   EISN
Sbjct: 316 EIQFDKLGAFVYSDEEGTVAFNLKEKVDP------------EVAKRRQEELLLLQAEISN 363


>gi|260910078|ref|ZP_05916759.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635790|gb|EEX53799.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 456

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 68/196 (34%), Gaps = 19/196 (9%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F       K      + + L E+  +      R +  +       S  
Sbjct: 174 CPHHCDFCYKDAFY---EGGKSFYTARVDAALKEIDAL----PGRHLYFLD-DHLLGSKR 225

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +   + G+ + +  ++ V+  +E        +  +   +AG+  + +G ++   ++
Sbjct: 226 FAAELFEGMKGMNRVFQSAATVQSILEG-------DLIEKAAEAGMRSVFIGFETFSPEN 278

Query: 145 LRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+   +  N      AA+    ++   ++   ++ L       +   +   +  A+   +
Sbjct: 279 LKASNKCQNLQRDYSAAVKRLHSLGIMINGSFVFGLDHDDADVFRRTVDWGVDNAITTAT 338

Query: 204 LYQLTIEKGTLFYKMH 219
            + LT   GT  +K  
Sbjct: 339 YHILTPYPGTRQFKRM 354


>gi|89892829|ref|YP_516316.1| hypothetical protein DSY0083 [Desulfitobacterium hafniense Y51]
 gi|89332277|dbj|BAE81872.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 445

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 89/251 (35%), Gaps = 25/251 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +NS   R ++     + + L +++ +    G R I           L    
Sbjct: 169 CPNRCGFC-YNSC--RNRMYIRRPVANVLRDIEGL----GTRHI-----------LFIDD 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRKAGVNRISLGVQSLEEQS 144
           N   +     +        E+   A  ++   +         + G   + +G +S+   S
Sbjct: 211 NFIGVPAYTRELLNHLRGRELKWSAAVTTKIADYPDVLDLMAETGCQSLFIGFESINNSS 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + +++   +    +    +    ++  +++ L       ++  L   +   ++ L+ 
Sbjct: 271 LHGVNKDNQFEKYERIVTAIHSRGIMINASMVFGLDGDEPDVFQRTLDWLVKNKIETLTS 330

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS-NHSFLGAES 263
           + LT   GT  +   K+   +L   +  +  YN    +    G+ A E+   + ++  E 
Sbjct: 331 HILTPYPGTELHGRMKEEGRIL---DHELSRYNTAHVVFQPKGMTAEELYKGYLWIYREF 387

Query: 264 LHNLNYWRYGD 274
               N WR   
Sbjct: 388 YSFPNIWRRRP 398


>gi|330506954|ref|YP_004383382.1| radical SAM domain-containing protein [Methanosaeta concilii GP-6]
 gi|328927762|gb|AEB67564.1| radical SAM domain protein [Methanosaeta concilii GP-6]
          Length = 430

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 76/197 (38%), Gaps = 14/197 (7%)

Query: 32  CPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI---EP 86
           C +C     V R+  +  +   I++ + E++ M++L     +  +   GGT SL      
Sbjct: 163 CTFC----QVPRFFGRSIRSRSIENIVDEVKEMKRLG----VKRVAISGGTGSLFGYRNK 214

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            N    ++ I     +     +++ +     V+    +  R   +  +  G++S  ++ L
Sbjct: 215 INREAFVEMIRSLSQILGKRNLSVPDMRVDLVDETVLEAVRDYTIGWVFFGLESGSDRIL 274

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R + +     + + A+ LA+++  ++    I   P +T   +E  +       +D + + 
Sbjct: 275 RAMRKGVTVEDNLRAVELAKSLGVKVGGSFIVGYPGETREDFEETMSFVEESMLDDVFVS 334

Query: 206 QLTIEKGTLFYKMHKDG 222
                 GT       D 
Sbjct: 335 IAEPIPGTPLSAQVLDM 351


>gi|315452658|ref|YP_004072928.1| (Dimethylallyl)adenosine tRNA methylthiotransferase-MiaB
           [Helicobacter felis ATCC 49179]
 gi|315131710|emb|CBY82338.1| (Dimethylallyl)adenosine tRNA methylthiotransferase-MiaB
           [Helicobacter felis ATCC 49179]
          Length = 434

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC     V   +  + +     + +    R   G + I     ++   G   S 
Sbjct: 151 CDKHCSYC----IVPHTRGKEISIPMDLILQEARYRVENGAKEIILLGQNVNNYGARFST 206

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P+     +L+ + +   +          +P  ++    + + K       I + +QS 
Sbjct: 207 DHPKVTFTTLLESLCQIEGLKRIRF--TSPHPLHMDDAFLECFAKHPQICKSIHIPLQSG 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +     +  I   R++ P +    D+I   P ++   +E  +       
Sbjct: 265 SNAILKAMRRGYTKEWYLNRIEKLRSLVPDVGIGTDIIVGFPGESEVDFEHTMDVLEQVR 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D +  +  +    T            +  +N++       Q I        
Sbjct: 325 FDTMYSFIYSPRPLTSAASWDHQVPYEIAQQNLSRLQQRH-QEILEQKAKTQ 375


>gi|288959688|ref|YP_003450029.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Azospirillum sp. B510]
 gi|288911996|dbj|BAI73485.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Azospirillum sp. B510]
          Length = 456

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 63/197 (31%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                    L E + +    G R I+ +      + G  P 
Sbjct: 149 CDKFCTFC---VVPYTRGAEFSRPAGQILAEAKRLVA-GGTREITLLGQNVNAWHGDGP- 203

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   I +   +     I     +P  +  +  + + +    +  + L VQ+
Sbjct: 204 ---DGATWGLGRLIRQLAEIDGLERIRYTTSHPRDMADDLIRAHAEVPQLMPYLHLPVQA 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H+A +    +   R+  P ++   D I   P ++   +   L+     
Sbjct: 261 GSDRILAAMNRKHSADDYRRLVDRLRDAKPDLAMSGDFIVGFPGESDADFAATLKLVTDI 320

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 321 GYAQAYSFKYSPRPGTP 337


>gi|307354819|ref|YP_003895870.1| MiaB-like tRNA modifying enzyme [Methanoplanus petrolearius DSM
           11571]
 gi|307158052|gb|ADN37432.1| MiaB-like tRNA modifying enzyme [Methanoplanus petrolearius DSM
           11571]
          Length = 404

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 20/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           CV +C YC   +   R ++    ++  I+     +                +G  T S +
Sbjct: 126 CVSRCAYC--ITRSARGRLRSFPEDKIIEEIERLVSAGAVEIQLTGQDLSAYGMDTGSSL 183

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P  +  I     +   V   +     A P + E+++     +   +   L VQS  ++ 
Sbjct: 184 -PDLLNRINSLEGEFM-VRVGMMNPSTAIPLTDELSD-AFLGEKIFSFAHLPVQSGSDKV 240

Query: 145 LRFLGRNHNASEAIAAIHLAR--NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   +    +   R  +   R+S D I   P +T   +   L          +
Sbjct: 241 LSDMKRGYQVQDFRNLVAELRKKDPGIRISTDFIVGYPTETEEDFLKTLALLEEIRPTKV 300

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           ++ + +  +GT   K+    D +    + A           +      Y+  N SF+G +
Sbjct: 301 NITRFSAREGTDAAKLKDIPDWIKKERSRA----------LTIAANRLYDSVNESFIGKD 350


>gi|168703855|ref|ZP_02736132.1| Fe-S oxidoreductase [Gemmata obscuriglobus UQM 2246]
          Length = 529

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 22/213 (10%)

Query: 32  CPY-CDFNSHVRRYKVGQEN--------------FIQSFLTEMQWMRQLTGPRSISSIFF 76
           CPY C F      +K G+                 I   L ++  +    G R+I     
Sbjct: 225 CPYQCSFCCIQAPFKNGEVAPLGQKQPPNSYRFWSIDHVLGQIDTLVNKYGVRNIKIADE 284

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
                 ++  +++  I DGI        ++ I       +++       + AG N +++G
Sbjct: 285 MF----VLNKRHVVGICDGIIARG---YDLNIWAYTRVDTIKDGMLPKLKAAGFNWLAVG 337

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +++  ++    + +  +  +  + +   ++    +  + I+ LP+         L  AL 
Sbjct: 338 IEAGADRVRTDVDKAFSQEQVYSVVREIQSAGISVIGNYIFGLPEDDHATMRATLDLALD 397

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
              +  + Y      G+  Y       + LP  
Sbjct: 398 LKCEFANFYSAMAYPGSPLYATATQKGIPLPRR 430


>gi|194366007|ref|YP_002028617.1| HemN domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194348811|gb|ACF51934.1| HemN domain protein [Stenotrophomonas maltophilia R551-3]
          Length = 407

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 92/342 (26%), Gaps = 67/342 (19%)

Query: 67  GPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR 126
             R + ++    G    + P  +  +LD + ++  + +     +E    +    +    R
Sbjct: 95  EDREVVAMVLQLGLAETLPPPQLGQLLDAVPQH--LRTVARPQVEVRLDAGSALSPAQLR 152

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-----ARNIFPRMSFDLIYALPK 181
             G  R            L  + R       + A        AR    R+        P 
Sbjct: 153 AVGCTR------------LNVIDRADAPGPTLLAQARQVGFTARYYQLRV--------PG 192

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              T +   L   L+ A + + L                     LP    A         
Sbjct: 193 SEDTGFIERLHEVLAEAPERILL----------------PAPCALPQRPSAAHWLQ-AWR 235

Query: 242 ITSAHGLHAYEISNHSFLGAESLHNLN-YWRY-----------GDYIGIGPGAHSRVKVG 289
           +    G       ++      + H      R+            D+IG+G  A S++   
Sbjct: 236 LLRDAGYEPIGGDHYQRGDLPNPHGPGDGQRHCDLAGVPRRDRSDFIGLGLSACSQIGEV 295

Query: 290 SHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEML 349
            +R    +E     W   ++     V     LS +++    +   +     +    +E  
Sbjct: 296 FYR----LEDELGEWRARLQSGHMGVAAGLILSEDERLAAEVAQSIACDHALDAAAFEWR 351

Query: 350 AGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTM 385
                +            L  +G+  +     LR  + G  +
Sbjct: 352 NDEPFEECFAEQLPALSPLLARGW-AQWDARVLRLAEEGRLL 392


>gi|227500161|ref|ZP_03930230.1| protein family radical SAM protein [Anaerococcus tetradius ATCC
           35098]
 gi|227217683|gb|EEI82987.1| protein family radical SAM protein [Anaerococcus tetradius ATCC
           35098]
          Length = 309

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 21/202 (10%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT---GPRSISSIFF 76
           C  +        C YC      R       +  +S   ++ + ++     G       +F
Sbjct: 34  CPNRDGTKSYDACIYCS----ARGSGEWTMSSHKSIREQISYQKERLSKAGRDEAYIAYF 89

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRI 133
              T +  E   +  I     +       V + I      +    +   +   K     +
Sbjct: 90  QNFTNTYGEVSYMRKIF---MEAIEEDDVVGLAIATRADCLNSSVLKLLEDLSKKTFLIV 146

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+QS+ E+++ F+ R ++  E   A+     +   +   +I  LP +T   +  ++  
Sbjct: 147 ELGMQSVNEKTISFVNRGYSHEEFDKALAKLEKMGINILVHIIVGLPYETNEDYMNDVSY 206

Query: 194 ALSYAVDHLSLYQLTIEKGTLF 215
             S  +  + ++ L +EK T  
Sbjct: 207 INSKKIWGVKIHNLYVEKNTRL 228


>gi|190574685|ref|YP_001972530.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas maltophilia K279a]
 gi|190012607|emb|CAQ46235.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Stenotrophomonas maltophilia K279a]
          Length = 407

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/344 (12%), Positives = 92/344 (26%), Gaps = 67/344 (19%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG 124
           L   R + ++    G    + P  +  +LD + ++    +  ++ +  +  S        
Sbjct: 93  LAEDREVVAMVLQLGLAETLPPPQLGQLLDAVPQHLRTVARPQVEVRLDAGSALAP--AQ 150

Query: 125 YRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL-----ARNIFPRMSFDLIYAL 179
            R  G  R            L  + R       + A        AR    R+        
Sbjct: 151 LRAVGCTR------------LNVIDRADAPGPTLLAQARQVGFTARYYQLRV-------- 190

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P      +   L   L+ A + + L                        E  +   +   
Sbjct: 191 PGSEDAGFIERLHEVLAEAPERILL-----------------PAPCALPEYPSAVHWLQA 233

Query: 240 QSITSAHGLHAYEISNHSFLGAESLHNLN-YWRY-----------GDYIGIGPGAHSRVK 287
             +  A G       ++      + H      R+            D+IG+G  A S++ 
Sbjct: 234 WRLLRAAGYEPIGGDHYQRGDLPNPHGPGDGQRHCDLASVPRRDRSDFIGLGLSACSQIG 293

Query: 288 VGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWE 347
              +R    +E     W   +      V     LS +++    +   +     +    +E
Sbjct: 294 EVFYR----LEDELGEWRARLLAGHMGVSAGLILSEDERLVAEVAQSIACDHALDAAAFE 349

Query: 348 MLAGRNLDIECERN------LQRQGFIERVQFSRLRCTQRGMTM 385
                  +            L  +G+  +     LR  + G  +
Sbjct: 350 WRNDEPFEECFAEQLPALSPLLARGW-AQWDARVLRLAEEGRLL 392


>gi|149490145|ref|XP_001514441.1| PREDICTED: similar to CDK5 regulatory subunit associated protein
           1-like 1, partial [Ornithorhynchus anatinus]
          Length = 419

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 90  CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 147

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 148 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEAMAKILSHPRVYAFLHIPVQSA 201

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 202 SDSVLMGMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDEDFQDTVKLVEDYR 261

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   KM +     +P++        L+Q   S +    
Sbjct: 262 FPSLFINQFYPRPGTPAAKMQQ-----VPAQVKKQRTKELSQLFHSYNPYDH 308


>gi|281356076|ref|ZP_06242569.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
 gi|281317445|gb|EFB01466.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
          Length = 348

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 75/218 (34%), Gaps = 11/218 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K C YC     +RR     + + I +   E+         +   SI    G    IE 
Sbjct: 49  CAKNCFYCG----IRRGNHLVKRYRIDA--DEIVETAVWAYEQKFGSIVMQSGE---IES 99

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
              A  ++ + K  + ++   + +  +        ++ +R AG  R  L +++   +  R
Sbjct: 100 PEFAAFIESVLKRISAATGGGLGVTLSCGEQSPEVYERWRNAGATRYLLRIEASNPELYR 159

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L    H+ +  +  +   R +  ++   ++  LP QT+     +L+    + +D + + 
Sbjct: 160 RLHPADHDFNARLECLRSLRKLDYQVGSGVMIGLPGQTVDDLVHDLRFFEEFDLDMIGMG 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  T      +  +     +  A         + 
Sbjct: 220 PYIPHADTPLGHGIEVTEEYRRRQLEAGLRMIACTRLL 257


>gi|78222902|ref|YP_384649.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78194157|gb|ABB31924.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 467

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 14/240 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC           G+   ++     +  +  L     +S ++F     +     
Sbjct: 194 CPFSCIYC-----TYPLLEGERMRLRPVADIIAEIGDLVDVHGVSYLYFVDDIFNYPLEF 248

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + L     A    V+ +  I    NP  +          AG + +  G  S     LR 
Sbjct: 249 ALELCRAMSAARLPVAWSAFI----NPDFLPPQLLDAMLAAGCDALEFGTDSGSPVMLRN 304

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH-LSLYQ 206
           L ++    +   A  L R      +  +++  P +T              A    +++  
Sbjct: 305 LRKSFGIEKVREASRLCREAGVDFAHYILFGGPGETPATIAESFALMDEVAPTAVIAMTG 364

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYN----LTQSITSAHGLHAYEISNHSFLGAE 262
           + I  GT  Y+      L+ P  ++    +     +  ++       A + +N    G E
Sbjct: 365 IRIFPGTAIYRQALADGLITPETDLLRPAFYIAPTIADTLCELVREEALKRTNWVVPGLE 424


>gi|313899453|ref|ZP_07832963.1| radical SAM domain protein [Clostridium sp. HGF2]
 gi|312955741|gb|EFR37399.1| radical SAM domain protein [Clostridium sp. HGF2]
          Length = 557

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIE- 85
           C   C YC             +  ++ F +  +  +        ++ +     T +    
Sbjct: 183 CPYGCTYC---------LSSADRAVRMFSMEYIMRILHKLKDSRVTQVKLLDRTFNADPK 233

Query: 86  -PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQSLE 141
               IA  ++    +           E    ++     Q + +  V    R  +GVQS  
Sbjct: 234 RALQIARYMNEYCTHQIF------QFEIVAETLSEELLQFFCEEAVPGRFRFEIGVQSFH 287

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            ++L  +GR  N    I  I   +     M  DLI  LP + +  +++      S     
Sbjct: 288 TRTLHAVGRTQNNERLIEVIQRLKASGAVMHVDLIAGLPYEDLNLFQVSFDTLFSLQASE 347

Query: 202 LSLYQLTIEKGTLFYKMHKDGDL 224
           L L  L + KGT      +    
Sbjct: 348 LQLGILKLLKGTKLRSQRESYHF 370


>gi|302387536|ref|YP_003823358.1| hypothetical protein Closa_3205 [Clostridium saccharolyticum WM1]
 gi|302198164|gb|ADL05735.1| conserved hypothetical protein [Clostridium saccharolyticum WM1]
          Length = 314

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 37/254 (14%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS------ 73
           C  +        C +C           G   F +S    +   +Q+   RS         
Sbjct: 34  CPNRDGTLGTGGCIFCS--------GGGSGEFAESLAPHLSVSQQIQSARSRIQGKIKPE 85

Query: 74  -----IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
                 +F   T +      +  +      +  V+    ++I   P  +     Q  ++ 
Sbjct: 86  SSRFIAYFQSYTNTYAPLSYLKELFTQAISHPDVA---ILSIATRPDCLPPPVLQLLQEL 142

Query: 129 GVNR---ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
              +   + LG+Q++ E + + + R ++      A    +     +   +I  LP +T  
Sbjct: 143 NQIKPVWVELGLQTIHESTAKHIRRGYSLPVFSEAYRNLKESGLTVIAHVILGLPGETRE 202

Query: 186 QWEMELQRALSY---AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                +          VD + L  L + +GT   + +K G + + +    VDL     +I
Sbjct: 203 MILETVDYLAHLGKHGVDGIKLQLLHVLQGTDLAEEYKMGLVPVCTLEEYVDLVIDCIAI 262

Query: 243 TSAHGLHAYEISNH 256
                +    IS  
Sbjct: 263 LPPEVVIH-RISGD 275


>gi|300814699|ref|ZP_07094949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300511172|gb|EFK38422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 467

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 85/261 (32%), Gaps = 28/261 (10%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           KYL   +NN+      S   YV+  + C   C +C            +       + E++
Sbjct: 159 KYL-DLDNNLGANRLYSYKSYVNIMYGCNNFCTFC---IVPYTRGREKSREADEIVDEIK 214

Query: 61  WMRQLTGPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
            +    G + I+ +      +G G   L      A +L  I     V       + ++P 
Sbjct: 215 SLID-KGSKEITLLGQNVNSYGRG---LENKTTFAQLLYRINDIKGVERIRF--MTSHPK 268

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-- 171
            +       +R      N + L VQ+   + L+ + R +   + +  I   R + P +  
Sbjct: 269 DISDELIYAFRDLDHLCNFLHLPVQAGSSRILKLMNRKYTKEDYLRKIDKIRQVNPDIAL 328

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S D++   P +T   +E  L        D    +  ++  GT   K        +     
Sbjct: 329 STDIMVGFPGETEEDFEETLDLVKRVEYDTSFTFLYSMRSGTPAAKSLNQVPDKI----- 383

Query: 232 AVDLYNLTQSITSAHGLHAYE 252
               +   Q +        YE
Sbjct: 384 ---KHERFQKLLDILYPIQYE 401


>gi|238922659|ref|YP_002936172.1| biotin synthase [Eubacterium rectale ATCC 33656]
 gi|238874331|gb|ACR74038.1| biotin synthase [Eubacterium rectale ATCC 33656]
          Length = 352

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 23/198 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+H  RY++  E  +    +  +      G R+   +  GG  P  
Sbjct: 67  YCKNDCLYCGIRHSNTHADRYRLSTEQIMACCESGYEL-----GFRTF--VLQGGEDP-Y 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + I  I+ GI   +      +  +  +       ++Q Y  AG +R  L  ++ +E+
Sbjct: 119 YTDERICEIVSGIKAKYP-----DCAVTLSIGEKSKESYQSYFDAGADRYLLRHETADEK 173

Query: 144 SLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                 R H A  ++      +   + I  ++    +   P QT+     +LQ       
Sbjct: 174 HYS---RLHPAEMSLENRKQCLWDLKEIGYQVGCGFMVGSPGQTVETLYEDLQFIKELEP 230

Query: 200 DHLSLYQLTIEKGTLFYK 217
             + +     +K T F  
Sbjct: 231 HMVGIGPFISQKDTPFAN 248


>gi|254437886|ref|ZP_05051380.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Octadecabacter
           antarcticus 307]
 gi|198253332|gb|EDY77646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Octadecabacter
           antarcticus 307]
          Length = 441

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 83/252 (32%), Gaps = 34/252 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  + E Q + + TG R I+    ++    G    
Sbjct: 165 CDK---FCAFCVVPYTRGSEVSRPADRIIREAQELVE-TGVREITLLGQNVNAYHG---- 216

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
                +A ++  + K   +      T  ++P+ ++    + +      +  + L VQS  
Sbjct: 217 -HAGGLAGLIWDLDKVDGLERIRFTT--SHPNDMDDALIEAHGTCDKLMPYLHLPVQSGS 273

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H   +    I   R   P   +S D I   P +T   +E  +    +   
Sbjct: 274 DKVLKAMNRKHTRDQYFVLIERIRAARPDLLLSGDFIVGFPGETEADFEDTMDLVRTVGY 333

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN---- 255
                ++ +   GT   +  +  +      +V +D  +  Q++         + S     
Sbjct: 334 GQAYSFKYSTRPGTPAAERAQVDE------DVKLDRLHRLQALLGDQQRE-IQTSMIGRT 386

Query: 256 ----HSFLGAES 263
                   G ES
Sbjct: 387 VKVLFEKKGRES 398


>gi|99034401|ref|ZP_01314414.1| hypothetical protein Wendoof_01000782 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225630069|ref|YP_002726860.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
 gi|225592050|gb|ACN95069.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
          Length = 408

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S        +   I S + +++   +         + F G   +     
Sbjct: 134 CNHSCTFC---SITEARGNNRSVPINSIIEQIRIFVE----NGYQEVVFTGVDITDFGTD 186

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +     G      +    E+        + + V+             +  + L +QS  
Sbjct: 187 LLGKPSLGSMIRRVLKDIPELKRLRLSSIDVAEVDDELMDLIANESRLMPHLHLSLQSGN 246

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R HN  + I   H  +++ P +    D+I   P +T   ++  +       +
Sbjct: 247 NLILKRMKRRHNREQVIEFCHKMKSLRPNIAFGADIIAGFPTETDEMFQDTVDLLKKTNI 306

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
            +L  +  +  K T   +M +  +
Sbjct: 307 VYLHAFPYSERKNTPAARMPQVPE 330


>gi|42520370|ref|NP_966285.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410108|gb|AAS14219.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 408

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S        +   I S + +++   +         + F G   +     
Sbjct: 134 CNHSCTFC---SITEARGNNRSVPINSIIEQIRIFVE----NGYQEVVFTGVDITDFGTD 186

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +     G      +    E+        + + V+             +  + L +QS  
Sbjct: 187 LLGKPSLGSMIRRVLKDIPELKRLRLSSIDVAEVDDELMDLIANESRLMPHLHLSLQSGN 246

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R HN  + I   H  +++ P +    D+I   P +T   ++  +       +
Sbjct: 247 NLILKRMKRRHNREQVIEFCHKMKSLRPNIAFGADIIAGFPTETDEMFQDTVDLLKKTNI 306

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
            +L  +  +  K T   +M +  +
Sbjct: 307 VYLHAFPYSERKNTPAARMPQVPE 330


>gi|58696768|ref|ZP_00372305.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58537042|gb|EAL60178.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 375

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 66/204 (32%), Gaps = 15/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S        +   I S + +++   +         + F G   +     
Sbjct: 101 CNHSCTFC---SITEARGNNRSVPINSIIEQIRIFVE----NGYQEVVFTGVDITDFGTD 153

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +     G      +    E+        + + V+             +  + L +QS  
Sbjct: 154 LLGKPSLGSMIRRVLKDIPELKRLRLSSIDVAEVDDELMDLIANESRLMPHLHLSLQSGN 213

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R HN  + I   H  +++ P +    D+I   P +T   ++  +       +
Sbjct: 214 NLILKRMKRRHNREQVIEFCHKMKSLRPNIAFGADIIAGFPTETDEMFQDTVDLLKKTNI 273

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
            +L  +  +  K T   +M +  +
Sbjct: 274 VYLHAFPYSERKNTPAARMPQVPE 297


>gi|67623719|ref|XP_668142.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54659316|gb|EAL37898.1| hypothetical protein Chro.10275 [Cryptosporidium hominis]
          Length = 915

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 15/178 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  + ++     R+ G  R+ LG+Q  +   L+ + R     + + +I L +
Sbjct: 319 IGLTLETRPDYITLDEILQLREFGCTRVQLGIQHTDYWVLKLINRGCYMRQIVKSIRLLK 378

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           +   ++   L+  LP      ++       + A D   +     ++ TL   +       
Sbjct: 379 DTGYKVDIHLMPDLPN----PYDHTSTNEFNLAPDESHILS---KRITLLKNLQAYIGFD 431

Query: 226 LPSENVAVDLYNLTQSITS-------AHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
                  V+ Y +  ++ S          L+  E+   S +  E   N  Y  Y +  
Sbjct: 432 NAQTLGVVNDYLMLSNVLSDPKLQCDQWKLYPCEVVPFSKI-EEWYENKAYLPYAEIF 488


>gi|315637089|ref|ZP_07892312.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22]
 gi|315478625|gb|EFU69335.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22]
          Length = 422

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 86/255 (33%), Gaps = 23/255 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     +   +    ++ +     ++ +  L        I  G    S  + Q
Sbjct: 150 CDFRCSYC----IIPYVRGDARSYSED--KILEQVTTLAANGFGEFILTGTNVGSYGKKQ 203

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQS 144
           +  +A +L  ++    V      +IE  P  ++    +   +  +   + + +Q   ++ 
Sbjct: 204 HTSLAKLLKKMSLIKGVRRIRMGSIE--PIQIDDEFKEIINEPFMAKHLHIALQHTSKEM 261

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R +     +      R     +  D I   P +T   W+  ++    + + H+  
Sbjct: 262 LKIMNRRNKVLSDLELFEFLRENGYALGTDFIVGHPGETEALWKEAMENLHRFPLTHVHA 321

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           +  +   GT    M           ++A   YN   +I            N      ++L
Sbjct: 322 FTYSKRDGTPSATMKPQIK-----GDIAKVRYNELINIIEQKNY------NFRKENKKTL 370

Query: 265 HNLNYW-RYGDYIGI 278
             L    + G YIG+
Sbjct: 371 EVLVEQEKNGKYIGL 385


>gi|257791365|ref|YP_003181971.1| RNA modification enzyme, MiaB family [Eggerthella lenta DSM 2243]
 gi|257475262|gb|ACV55582.1| RNA modification enzyme, MiaB family [Eggerthella lenta DSM 2243]
          Length = 459

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 29/205 (14%)

Query: 28  CVKKCPYCDFNSHVRRYK---------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC    +VR  +            E ++ + + E+  + Q              
Sbjct: 165 CNNFCSYC-IVPYVRGREKSRPLEDIVAEAERYVAAGVKEITLLGQNVNSYGRDL----Y 219

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISL 135
           G+P     Q +  +     +    ++       ++P  +       F   R   +  + L
Sbjct: 220 GSPRF--AQVLDALDQTGIERLRFAT-------SHPKDLNDEVVGRFATLRSL-MPALHL 269

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQS  +  L  + R +      A +   R+  P +  S D+I   P +T   +E   + 
Sbjct: 270 PVQSGSDAVLAAMNRRYTRDHYRALVAKLRDAVPDIALSTDIIVGFPGETAKDFEDTYRL 329

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                   +  +  +  +GT    M
Sbjct: 330 VDEVGYHQVFTFIYSKREGTPAASM 354


>gi|228476133|ref|ZP_04060841.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|314936303|ref|ZP_07843650.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
 gi|228269956|gb|EEK11436.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|313654922|gb|EFS18667.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
          Length = 448

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 78/233 (33%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   + Q      + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVQSGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +        + +   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLEEIDGLERIRISSIEAS--QLTDEVIDVLKNSNKVVRHLHVPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +    +  P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMEHFSERLTKLHDALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 328 VFPYSQRIGTPAARMGDQIDESIKNERVHKLIALSDQLAKEYASKFENEVLEV 380


>gi|160947108|ref|ZP_02094275.1| hypothetical protein PEPMIC_01040 [Parvimonas micra ATCC 33270]
 gi|158446242|gb|EDP23237.1| hypothetical protein PEPMIC_01040 [Parvimonas micra ATCC 33270]
          Length = 305

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/232 (9%), Positives = 79/232 (34%), Gaps = 14/232 (6%)

Query: 28  CVKK------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  +      C +C   +    +   +++  +    ++ ++++          +F   T 
Sbjct: 30  CPNRKNGKKGCKFCS-ETGSGEFTTKRKSITEQLKAQISFLKEKDKNSG-YIAYFQSYTN 87

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQ 138
           + +  + +  +     +     +   ++I         + ++   +        I LG+Q
Sbjct: 88  TFLPVEELRKM---YYEAINFPNVKVLSIATRADCFNEDIYKLLTELNEKIEVWIELGLQ 144

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           S  E++   +   ++       +   + +  +  F +I+ LP +T   ++  +    +  
Sbjct: 145 SSNEKTRNNMNIGYSTKTFENCVKKLKELNIKTIFHIIFGLPNETEKDYKNTIDYVNTQK 204

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              + ++ L I+     Y+ +      + + N  ++   ++        +  
Sbjct: 205 PWGIKIHSLYIQNDCELYEEYLKNSFKVITWNEYIEALIMSIENLDKDIIIH 256


>gi|153938546|ref|YP_001391931.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum F
           str. Langeland]
 gi|152934442|gb|ABS39940.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum F
           str. Langeland]
 gi|295319951|gb|ADG00329.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum F
           str. 230613]
          Length = 558

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + + I+    E++++      +++  I F   T +     
Sbjct: 183 CPFKCKYC----LSSTLHGVRFHDIERVKKEIKFLV----DKNVKLIKFVDRTFNC---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
           N    +        + ++     E +   +     +   K    RI    GVQ+   + L
Sbjct: 231 NHKFAMGIWKYILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVL 290

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R+ N       +   +N+   +   DLI  LP +    ++       S   + + L
Sbjct: 291 KNINRHVNFETIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQL 350

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L + KG+      +         P   +        + + 
Sbjct: 351 GFLKLLKGSSMRLEAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|320530820|ref|ZP_08031858.1| MiaB-like tRNA modifying enzyme [Selenomonas artemidis F0399]
 gi|320136906|gb|EFW28850.1| MiaB-like tRNA modifying enzyme [Selenomonas artemidis F0399]
          Length = 438

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 34/233 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGG------GT 80
           C   C +C            +   + +   E + +        + + I  G       G 
Sbjct: 161 CQNFCTFC---IIPYARGPVKSRELAAVRRETERIAAAGFHEIVLTGIHLGAYGIDLPGR 217

Query: 81  PSL-------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
           P+L       +    +  +  G  ++  +S+++   I   P                  +
Sbjct: 218 PTLADACRTALSLPELRRLRLGSLESVELSNDLLELIRTEPRFA-------------AHL 264

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMEL 191
            L +Q+  +  L  + R+++ +     I   R       +S D+I   P +T  Q+E  L
Sbjct: 265 HLPLQAGSDGVLTAMNRHYDTAAFARLIEDVRRAVPGVAVSTDIIVGFPGETEAQFEESL 324

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                     + ++  +  +GT   +      +  P                +
Sbjct: 325 DFVRRMGFARMHVFPYSARRGTPAARRPD--QVPAPIRKERAARMQALAEELA 375


>gi|11498846|ref|NP_070075.1| hypothetical protein AF1247 [Archaeoglobus fulgidus DSM 4304]
 gi|2649334|gb|AAB89997.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 405

 Score = 59.9 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 27/206 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVG---QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+ KC +C   +   R ++     +  ++     ++   +     S  +  +G      +
Sbjct: 124 CLGKCSFCA--TKFARGRLRSFSMDAIVREAERAVRAGYREIQLTSQDTGAYGMDKGRAM 181

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS---------L 135
            P+ +  I           S +E         +   +        +N  S         +
Sbjct: 182 LPELLRKI-----------SEIEGEFRVRVGMMNPQHAVRMLDELINAYSSEKIYKFLHI 230

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            VQS + + L  + RNH   + +  +   RN F    +S D+I   P +T   +    + 
Sbjct: 231 PVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDDVLISTDIIVGFPTETEEAFWKSYEL 290

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D +++ + +  KGT   ++ 
Sbjct: 291 IKETRPDIVNITRYSARKGTPAARLR 316


>gi|209883419|ref|YP_002287276.1| hypothetical protein OCAR_4262 [Oligotropha carboxidovorans OM5]
 gi|209871615|gb|ACI91411.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
          Length = 420

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 72/201 (35%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + +    +  +R+L        +  G    S    +
Sbjct: 148 CDHRCTFC-----IIPYGRGNSRSV-AMGAAVDQVRKLVEGGCPEIVLTGVDITSYGADL 201

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I K+      + ++   +    + +           +  + L +Q+ +
Sbjct: 202 PGAPKLGTLVKQILKHVPELKRLRLS-SIDSVEADHDLLDVIADNERLMPHLHLSLQAGD 260

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H  ++A+A     R + P +    DLI   P +T   +E  L       +
Sbjct: 261 DLILKRMKRRHARADAVAFCEQVRRLRPDVAFGADLIAGFPTETEVMFERSLALVEDCDL 320

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   KM +
Sbjct: 321 TFLHVFPYSKRPGTPAAKMPQ 341


>gi|150398286|ref|YP_001328753.1| MiaB-like tRNA modifying enzyme [Sinorhizobium medicae WSM419]
 gi|150029801|gb|ABR61918.1| MiaB-like tRNA modifying enzyme [Sinorhizobium medicae WSM419]
          Length = 424

 Score = 59.9 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 76/201 (37%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C +C     +         V     +      ++   +      + +  +G   P 
Sbjct: 147 CDHRCTFC----IIPYGRGNSRSVPMGAVVDQARRLVEGGYREIVLTGVDATSYGADLPG 202

Query: 83  LIEPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
                 +A  +L  + +   +  +   +IEA+   ++           +  + L +Q  +
Sbjct: 203 TPTLGLLAKTLLKQVPEILRLRLSSIDSIEADVHLLD---LIAEEPRFMPHLHLSLQHGD 259

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H++++A A       + P +SF  D+I   P +T   ++  ++ A    +
Sbjct: 260 DLMLKRMKRRHSSADARAFCAEVLRLRPEISFSADMIAGFPTETEAMFQNAVRLAEDCGL 319

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
            HL ++  +   GT   +M +
Sbjct: 320 AHLHVFPYSPRPGTPAARMPQ 340


>gi|258621980|ref|ZP_05717009.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258585733|gb|EEW10453.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 383

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 62/196 (31%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC                +   L E+  + +  G R +     ++    G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGAT-- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                I    + +    T+     I     +P     +    Y      V+ + L VQS 
Sbjct: 211 -HDGEICSFAELLRLVATIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   ++  ++      
Sbjct: 270 SDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVD 329

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 330 FDMSFSFIFSPRPGTP 345


>gi|154149538|ref|YP_001406090.1| hypothetical protein CHAB381_0502 [Campylobacter hominis ATCC
           BAA-381]
 gi|238065316|sp|A7I0P9|RIMO_CAMHC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|153805547|gb|ABS52554.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 433

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 79/227 (34%), Gaps = 24/227 (10%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +L   EN +      +   Y+     C +KC +C   S   R K          +  +  
Sbjct: 121 FLQKNENRVIT--GTNFHAYIKISEGCNQKCSFCAIPSFKGRLKSRD-------IQNIVS 171

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQ-----NIALILDGIAKNWTVSSNVEITIEANPSS 116
             ++   R      F     S           +  ++  I K   V   +   +   P++
Sbjct: 172 EVEMLVERGYYDFSFIAQDTSSFGRDIGLKNGLISLIKEIEKINGV--KIARILYLYPTT 229

Query: 117 VEVNNFQGYRKAGV--NRISLGVQSLEEQSLRFLGRNHNASEAIA---AIHLARNIFPRM 171
                 Q    + V  N   + +Q + ++ L+ + R +  +E +     +  A+N F R 
Sbjct: 230 TNKELLQVIIDSPVFVNYFDMPIQHINDEMLKIMKRGNGKAEILELLQTMRAAKNSFLRT 289

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               I   P ++   ++   +    +  D +S++  + E+ T  ++M
Sbjct: 290 GI--IVGHPGESEEYFDELCRFLQEFKFDRISVFAYSKEEDTASFEM 334


>gi|78779785|ref|YP_397897.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9312]
 gi|123741439|sp|Q319I4|MIAB_PROM9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78713284|gb|ABB50461.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prochlorococcus marinus
           str. MIT 9312]
          Length = 463

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 77/235 (32%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  +  +  +E+Q +      + I+ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPNAIKSEIQKLAD-DNFKEITLLGQNIDAYGRDLPG 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     ++    I     +P        Q   +         +  Q
Sbjct: 226 TTKEGRKENTLTDLLYYIHDINGISRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R +N  +    I   R++ P   ++ D I A P +T  Q++  L+    
Sbjct: 286 SGNDEILKQMSRGYNIKKYKNIIDNIRSLMPDASITADAIVAFPGETEQQYQDTLKLISD 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D ++    +    T          L    +   +   N     T+ +    Y
Sbjct: 346 IGFDQVNTAAYSPRPNTP--AAVWSNQLSEEVKKTRLQEINALVEKTARNRNQRY 398


>gi|320547358|ref|ZP_08041649.1| TIGR01212 family radical SAM protein [Streptococcus equinus ATCC
           9812]
 gi|320448056|gb|EFW88808.1| TIGR01212 family radical SAM protein [Streptococcus equinus ATCC
           9812]
          Length = 311

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPEVKKYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  +++   +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYIAELSERMHVTVELGLQTTYDETSEII 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R HN    +  +   R + P++     LI  LP +T       ++R +    +D + L+
Sbjct: 160 NRGHNYDLYVKTVKRLRELAPKVEIVSHLINGLPGETHEMMIENVRRCVTDNEIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S +  V++      I   + +  
Sbjct: 220 LLHLMTSTKMQRDYHEGRLKLLSMDEYVNIICDQLEIIPKNIVIH 264


>gi|295395412|ref|ZP_06805611.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971734|gb|EFG47610.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 488

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 65/235 (27%), Gaps = 15/235 (6%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C     V   R K                  Q     ++             +
Sbjct: 160 CNNTCTFC----IVPHLRGKEKDRRPGDILAEVEALAAQGVIEVTLLGQNVNSYGTEFRD 215

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            Q    +L  + K   +          +P++   +      +    + ++ + +QS  + 
Sbjct: 216 RQAFGKLLRAVGKVQGIERVRF--TSPHPAAFSDDVIDAMAETPTVMPQLHMPLQSGSDT 273

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++     +  +   R   P  S   D+I   P +T   ++  +          
Sbjct: 274 VLKAMRRSYRTKRFMGILDKVRERIPHASITTDIIVGFPGETEEDFQQTMDVVREARFTQ 333

Query: 202 LSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +Q +I  GT             +    E +      +      A   +  E+
Sbjct: 334 AYTFQYSIRPGTPAAAMENQIPKDVVQERFERLVALQDEIAWEENKACVGNQVEV 388


>gi|291526459|emb|CBK92046.1| iron-only hydrogenase maturation protein HydE [Eubacterium rectale
           DSM 17629]
          Length = 352

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 23/198 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+H  RY++  E  +    +  +      G R+   +  GG  P  
Sbjct: 67  YCKNDCLYCGIRHSNTHADRYRLSTEQIMACCESGYEL-----GFRTF--VLQGGEDP-Y 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + I  I+ GI   +      +  +  +       ++Q Y  AG +R  L  ++ +E+
Sbjct: 119 YTDERICEIVSGIKAKYP-----DCAVTLSIGEKSKESYQSYFDAGADRYLLRHETADEK 173

Query: 144 SLRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                 R H A  ++      +   + I  ++    +   P QT+     +LQ       
Sbjct: 174 HYS---RLHPAEMSLENRKQCLWDLKEIGYQVGCGFMVGSPGQTVETLYEDLQFIKELEP 230

Query: 200 DHLSLYQLTIEKGTLFYK 217
             + +     +K T F  
Sbjct: 231 HMVGIGPFISQKDTPFAN 248


>gi|326202415|ref|ZP_08192284.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325987533|gb|EGD48360.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 345

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 23/196 (11%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           FC   C YC     + R     + +   ++  L+  +   +L       +    GG    
Sbjct: 61  FCKNDCYYCG----ISRSNPNADRYRLSMEEILSCCETGYELG----FRTFVLQGGEDGY 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+ GI   +    +  IT+     S E   ++ + +AG +R  L  ++  ++
Sbjct: 113 YSEDKVVEIIKGIKSAY---PDCAITLSIGERSYEA--YKRFFEAGADRYLLRHETATDE 167

Query: 144 SLRFLGRNHNAS----EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
               L   H A     E    ++  + I  ++    +   P QTM     +L     +  
Sbjct: 168 HYNKL---HPAELSLSERKQCLYNLKEIGFQVGTGFMVGSPFQTMENIAEDLLFLKEFKP 224

Query: 200 DHLSLYQLTIEKGTLF 215
             + +      K T F
Sbjct: 225 HMIGIGPFIPHKDTRF 240


>gi|288940181|ref|YP_003442421.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
 gi|288895553|gb|ADC61389.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
          Length = 469

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 66/190 (34%), Gaps = 9/190 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   +   R         +      ++         ++ +  GG    L    
Sbjct: 172 CRYQCTFC--VTTQARGPERSRPLPEIVREVERFQDSGIREVVLTGVHLGGYGADL--GT 227

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSLR 146
           ++  +++ +     +      ++E  P  +    +  +     +  + L +QS  ++ LR
Sbjct: 228 DLTHLIERLLNETAIPRLRLGSLE--PWDLPERFWSLFADRRLMPHLHLPLQSGSDRVLR 285

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R     E I  +  AR   P ++   D+I   P +    W    + A S    H+ +
Sbjct: 286 RMARRCKRDEYIRLVEGARAAIPDLNLTTDIIVGFPGEDDDDWRQTFELAESLRFGHIHV 345

Query: 205 YQLTIEKGTL 214
           +  +   GT 
Sbjct: 346 FGYSPRPGTP 355


>gi|157415679|ref|YP_001482935.1| MiaB-like tRNA modifying protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|238065317|sp|A8FNC1|RIMO_CAMJ8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|157386643|gb|ABV52958.1| hypothetical protein C8J_1360 [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 439

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  +N   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFINYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRISVFAYSKEEDTAAFDM 335


>gi|323486941|ref|ZP_08092256.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum
           WAL-14163]
 gi|323399713|gb|EGA92096.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum
           WAL-14163]
          Length = 503

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   ++    ++ +  L     +  +  G    S    +
Sbjct: 212 CNNFCSYC-----IVPYVRGRERS-RNPEDIIREIEALVASGVVEIMLLGQNVNSYGKNL 265

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I +   +       + ++P  +     +  + +      + L +QS  
Sbjct: 266 EKPITFAELLQQIEQIEGLERIRF--MTSHPKDLSDELIEVMKHSRKICRHLHLPLQSGS 323

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +      +   P +S   D+I   P +T   +E  +        
Sbjct: 324 SRILNLMNRKYTKEQYLTLAAKIKEAIPDISLTTDIIVGFPGETEEDFEETMDVVQRVRY 383

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 384 DSAFTFIYSKRTGTPAASM 402


>gi|126658124|ref|ZP_01729275.1| Putative methyltransferase [Cyanothece sp. CCY0110]
 gi|126620495|gb|EAZ91213.1| Putative methyltransferase [Cyanothece sp. CCY0110]
          Length = 478

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 70/191 (36%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  ++  +    ++   EM   + + G  S+   FF   T ++    
Sbjct: 207 CPAKCTFCLWPQTIGGHQ-YRAKTPEAVGKEMALAKSIWGN-SVREYFFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++        ++        AN   ++ +  +  R  G+  + +G +S  +  L  
Sbjct: 261 DKKRVIAISEHLKKLNLTWSCNARAN---LDYDTLKTLRDNGLRLLLVGFESGNQAVLDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   ++    +  ++    I  LP ++    E  ++ A   +   + +   
Sbjct: 318 VKKGIKLEVARKFMNNCNKLGIKVHGAFILGLPNESKETIEDTIRFACEVSPHTIQVSIA 377

Query: 208 TIEKGTLFYKM 218
           +   GT  Y+ 
Sbjct: 378 SPYPGTELYQQ 388


>gi|126696829|ref|YP_001091715.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9301]
 gi|229890597|sp|A3PED9|MIAB_PROM0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|126543872|gb|ABO18114.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str. MIT
           9301]
          Length = 464

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 75/235 (31%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  +  +  +E+Q +      + I+ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPNAIKSEIQKLAD-DNFKEITLLGQNIDAYGRDLPG 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     I     +P        Q   +         +  Q
Sbjct: 226 TTKEGRKENTLTDLLYYIHDVKGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R ++  +    I   R++ P   ++ D I A P +T  Q++  L+    
Sbjct: 286 SGNDEILKQMSRGYSIKKYKNIIENIRSLMPDASITADAIVAFPGETEKQYQDTLKLISE 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D ++    +    T          L    +   +   N     T+      Y
Sbjct: 346 IGFDQVNTAAYSARPNTP--AAVWTNQLSEEVKKARLQEINDLVEKTARSRNQRY 398


>gi|152979606|ref|YP_001345235.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Actinobacillus
           succinogenes 130Z]
 gi|229890491|sp|A6VQQ3|MIAB_ACTSZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|150841329|gb|ABR75300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Actinobacillus
           succinogenes 130Z]
          Length = 474

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 63/200 (31%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC       R +              Q   Q  G R I+ +         P+  
Sbjct: 157 CNKYCTYC--VVPYTRGEEVSRPLDDVLFEVAQLADQ--GVREINLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I    + +    ++     +     +P     +    Y      V+ + L VQS  
Sbjct: 211 HDGGICTFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYADTPELVSFLHLPVQSGA 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H A E  + I   R + P +  S D I   P +T  ++E  +        
Sbjct: 271 DRILTMMKRGHTALEYKSIIRKLRKVRPDIQISSDFIVGFPGETNEEFEQTMNLIADVNF 330

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    M 
Sbjct: 331 DMSFSFVYSARPGTPAADMP 350


>gi|323691989|ref|ZP_08106237.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum
           WAL-14673]
 gi|323503912|gb|EGB19726.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum
           WAL-14673]
          Length = 500

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   ++    ++ +  L     +  +  G    S    +
Sbjct: 209 CNNFCSYC-----IVPYVRGRERS-RNPEDIIREIEALVASGVVEIMLLGQNVNSYGKNL 262

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I +   +       + ++P  +     +  + +      + L +QS  
Sbjct: 263 EKPITFAELLQQIEQIEGLERIRF--MTSHPKDLSDELIEVMKHSRKICRHLHLPLQSGS 320

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +      +   P +S   D+I   P +T   +E  +        
Sbjct: 321 SRILNLMNRKYTKEQYLTLAAKIKEAIPDISLTTDIIVGFPGETEEDFEETMDVVQRVRY 380

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 381 DSAFTFIYSKRTGTPAASM 399


>gi|317490506|ref|ZP_07948986.1| MiaB family RNA modification enzyme [Eggerthella sp. 1_3_56FAA]
 gi|316910399|gb|EFV32028.1| MiaB family RNA modification enzyme [Eggerthella sp. 1_3_56FAA]
          Length = 452

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 29/205 (14%)

Query: 28  CVKKCPYCDFNSHVRRYK---------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC    +VR  +            E ++ + + E+  + Q              
Sbjct: 158 CNNFCSYC-IVPYVRGREKSRPLEDIVAEAERYVAAGVKEITLLGQNVNSYGRDL----Y 212

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISL 135
           G+P     Q +  +     +    ++       ++P  +       F   R   +  + L
Sbjct: 213 GSPRF--AQVLDALDQTGIERLRFAT-------SHPKDLNDEVVGRFATLRSL-MPALHL 262

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQS  +  L  + R +      A +   R+  P +  S D+I   P +T   +E   + 
Sbjct: 263 PVQSGSDAVLAAMNRRYTRDHYRALVAKLRDAVPDIALSTDIIVGFPGETAKDFEDTYRL 322

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                   +  +  +  +GT    M
Sbjct: 323 VDEVGYHQVFTFIYSKREGTPAASM 347


>gi|307943540|ref|ZP_07658884.1| MiaB-like tRNA modifying enzyme [Roseibium sp. TrichSKD4]
 gi|307773170|gb|EFO32387.1| MiaB-like tRNA modifying enzyme [Roseibium sp. TrichSKD4]
          Length = 459

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 23/205 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +   +  +  +++L G      +  G    S    +
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPMGV-VVDQIKRLVGNGYNEIVITGVDITSYGADL 199

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    IA IL  +     +  +   +IEA     +             +    L +
Sbjct: 200 PGSPKLGTLIAKILTLVPDLKRLRLSSIDSIEA-----DEELMHVIANDHRLMPHFHLSL 254

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H  ++ I       A         D+I   P +T   +E  L+   
Sbjct: 255 QAGDDMILKRMKRRHLRADTIRFCEDVRAMRPDVVFGADIIAGFPTETEAMFENSLKIVD 314

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
              + HL ++  +   GT   +M +
Sbjct: 315 ECGLTHLHVFPFSPRPGTPAARMPQ 339


>gi|239637612|ref|ZP_04678584.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239596830|gb|EEQ79355.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 448

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 98/307 (31%), Gaps = 31/307 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATTLVNAGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLDQVDGLERIRISSIEAS--QLTDEVIDVLERSNKIVRHLHVPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        I       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMEHFSERITKLHEALPDVAITSDVIVGFPGETEEEFQETYDFIVKHQFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT   +M    D  + +     +      L +   S       E+       
Sbjct: 328 VFPYSSRIGTPAARMDNQIDEDIKNERVHKLIALSDQLAKEYASKFENEVLEVIPEEKGE 387

Query: 261 AESL---HNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
             +    +  NY +       D IG              +V I    +P ++ K +R   
Sbjct: 388 KPNTLVGYADNYMKVEFEGTEDLIG-----------QIIKVKIQKADYPLNYGKAIRIVE 436

Query: 313 HAVVEKE 319
           HA  + E
Sbjct: 437 HATNKSE 443


>gi|11499274|ref|NP_070512.1| hypothetical protein AF1684 [Archaeoglobus fulgidus DSM 4304]
 gi|2648876|gb|AAB89565.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 469

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 69/195 (35%), Gaps = 24/195 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV++C +C          + ++ +      + + + ++   +    +     +PS  +  
Sbjct: 191 CVRRCRFC----------IVRQIYFPPRWRKKEMLPEIGEEK----VAIIAPSPS--DHP 234

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               IL    +     S           +++       +KAGV  +++  ++  ++    
Sbjct: 235 QFKEILQHYVEQGKEVS----PSSVRADTLDEELADLLKKAGVKTLTIAPETASDKLQEV 290

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS----YAVDHLS 203
           + +     E + A  LA   F ++    +  LP ++    +  L++AL          +S
Sbjct: 291 INKGIGDEEVMRAAELASTRFEKVKLYYMVGLPGESFEDVKAILEQALRVKKLVGKVEIS 350

Query: 204 LYQLTIEKGTLFYKM 218
           +  L  +  T    M
Sbjct: 351 VNPLVPKPHTPLQWM 365


>gi|89897593|ref|YP_521080.1| hypothetical protein DSY4847 [Desulfitobacterium hafniense Y51]
 gi|89337041|dbj|BAE86636.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 581

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  ++      +  E F Q     +++     G R+I  +         +  +
Sbjct: 185 CPFNCQYCLSSTFQGVRYLPPERFRQIMRQTLRY-----GARTIKLVD----RTFNVNKE 235

Query: 88  NIALILDGIAK---NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEE 142
           +   ILD   +    +   + + +  E     ++       +    +  +  +GVQS   
Sbjct: 236 HALRILDIAREEAAQYPPEAGIRVHCEMAGELLDEEWLLYLQDYPKDLVQFEIGVQSTHP 295

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R  +       I   + +    +  DLI  LPK+    +        +   D 
Sbjct: 296 ETLAAIHRPQHFERWARYIREMQRLNKAHLHLDLIAGLPKEGWESFRRSFNEVYAVQPDM 355

Query: 202 LSLYQLTIEKGTLFYKMHKDGDL 224
           L L  L + KG+   +   +  L
Sbjct: 356 LQLGFLKVLKGSGLREQRGEYGL 378


>gi|298372633|ref|ZP_06982623.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroidetes oral taxon
           274 str. F0058]
 gi|298275537|gb|EFI17088.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroidetes oral taxon
           274 str. F0058]
          Length = 440

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C K C YC     +  Y  G+E   +   + +  ++ L           G    S +   
Sbjct: 155 CNKFCSYC-----IVPYTRGRERS-REVESIINEVKNLQANGYKEVTLLGQNVDSYLYND 208

Query: 85  ---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 + + +L+ +A           T  + P+ +     +   +       I L VQS
Sbjct: 209 GKGNATDFSQLLEKVALAVPDMRIRFTT--SYPNDMTDQTLEVIAQYPNICRYIHLPVQS 266

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSY 197
              ++L+ + R +   E +  I   R I P   +  D+      ++   +E  L      
Sbjct: 267 GSNKTLKLMKRKYTREEYLDRIAAIRRILPEASIGTDIFCGFSDESEQDFEDTLSLMREV 326

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             D   +++ +   GT   K
Sbjct: 327 RFDMAFMFKYSERPGTFAAK 346


>gi|317473080|ref|ZP_07932379.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899418|gb|EFV21433.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 11/190 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR       +  +    +            S +  GG  P     
Sbjct: 63  YCKNDCLYCG----IRRSNPNVSRYRLTVEQILSACESGYELGYRSFVLQGGEDP-YFHD 117

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  I+  + K +      +  I  +       ++Q   +AG NR  L  ++  E+  +
Sbjct: 118 ERMVSIVSAMRKAYP-----DCAITLSLGERSPESYQALYEAGANRYLLRHETATEEHYQ 172

Query: 147 FLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     + +     +   +     +    +   P QT      +L          + + 
Sbjct: 173 KLHPEVMSLAHRKQCLWDLKKAGFHVGTGFMVGAPGQTAAHLAEDLLFIKELNPKMVGIG 232

Query: 206 QLTIEKGTLF 215
                  T F
Sbjct: 233 PFIPHHDTPF 242


>gi|167759405|ref|ZP_02431532.1| hypothetical protein CLOSCI_01752 [Clostridium scindens ATCC 35704]
 gi|167662962|gb|EDS07092.1| hypothetical protein CLOSCI_01752 [Clostridium scindens ATCC 35704]
          Length = 307

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 13/206 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C              +   S   +++  ++    +   +    +F   T +      
Sbjct: 48  CVFCS----AGGSGDFASDRKLSITEQIEQGKRQVAAKHPGTSYIAYFQAYTNTYAPIAY 103

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +     ++  V     ++I   P  +  +  +   +    +   I LG+Q++   + 
Sbjct: 104 LRDMFMEAIRHPEVK---ILSIATRPDCLGEDVLKLLDELNQIKPVWIELGLQTIHPDTA 160

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           RF+ R ++ S    A+   R +   +    I  LP + M      ++      +  +   
Sbjct: 161 RFIRRGYDLSVFEQAVSRLRLLNIDVIVHTILCLPGEDMEMMLRTVRYLNCQNIQGMKFQ 220

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L I K T     ++     LPS   
Sbjct: 221 LLHILKNTDLAGYYEKHPFYLPSMEE 246


>gi|164686970|ref|ZP_02210998.1| hypothetical protein CLOBAR_00596 [Clostridium bartlettii DSM
           16795]
 gi|164603855|gb|EDQ97320.1| hypothetical protein CLOBAR_00596 [Clostridium bartlettii DSM
           16795]
          Length = 351

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 54/196 (27%), Gaps = 25/196 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     + +  S    M+           + +  GG  P      
Sbjct: 64  CKNDCYYCG----IRKSNKNADRYRLSLEQIMECADIGHKLGYSTYVLQGGEDP-YFTDD 118

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG--------VQS 139
            I  I+  I   +      +  I  +       +++ Y  AG +R  L          Q 
Sbjct: 119 KIVEIVKSIKAKYP-----DCAITLSIGEKSYESYKKYYDAGADRYLLRHETANEEHYQK 173

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           L    L+   R          +   + I  ++    +   P QT      +L        
Sbjct: 174 LHPSDLKLSNRIQ-------CLRNLKEIGYQIGAGFMVHSPYQTPEILAEDLLFLKDLDP 226

Query: 200 DHLSLYQLTIEKGTLF 215
             + +        T F
Sbjct: 227 HMVGIGPFIPHHDTQF 242


>gi|189345895|ref|YP_001942424.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
 gi|189340042|gb|ACD89445.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
          Length = 458

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 71/247 (28%), Gaps = 30/247 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          +         L   + + +        S+ F G    ++   
Sbjct: 166 CDYACAYC---------TIPHARGRSRSLPSEELVARA------RSLAFSGYREIVLTGV 210

Query: 88  NIAL-------ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           NI         ++  +     VS +        P  ++    +    +        + +Q
Sbjct: 211 NIGDYRGHASGLVGLLRMLEDVSVDRIRISSLEPDILDDELIETVAASKKITPHFHVPLQ 270

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  +  L+ + R +        +  A        +  D+I   P ++   +    +    
Sbjct: 271 SGSDSILKAMRRRYTTESYREKLVRAVGAISDCAIGADVIAGYPGESEEDFMQMYRFIEG 330

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             + +L ++  ++  GT+        +  LPS         L   +         E  + 
Sbjct: 331 LPIAYLHVFTCSVRPGTVLAAQLAADERRLPSPVELDRRSRLLIELGKRKT----EEYSG 386

Query: 257 SFLGAES 263
            F+G E 
Sbjct: 387 KFIGREC 393


>gi|210623513|ref|ZP_03293858.1| hypothetical protein CLOHIR_01808 [Clostridium hiranonis DSM 13275]
 gi|210153571|gb|EEA84577.1| hypothetical protein CLOHIR_01808 [Clostridium hiranonis DSM 13275]
          Length = 589

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 37/253 (14%)

Query: 28  CVKKCPYCDFNSHVR--------RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC  +S ++        R K   +N I + + +++++ +    +  +++     
Sbjct: 191 CPFNCQYC-LSSAIKGLRYFSLDRVKKDLKNLIDARVAQIKFIDRTFNAKKKTAMDI--- 246

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGV 137
                    +  +++      T         E     ++    +  +    G+ +  +GV
Sbjct: 247 ---------MKFLMENDNGFTT------YHFEVTAHLIDDEMLEFLKDCKPGLFQFEIGV 291

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           QS ++  L   GR  +  +    +    +        DLI  LP +    +E       +
Sbjct: 292 QSTDQNVLEACGRKDDFVKLSKVVKQIESYKNIHQHLDLIAGLPYEGYKGFEKSFNDVYN 351

Query: 197 YAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS----AHGLH 249
             ++ L L  L + KGT   K   MH       P   V  + Y     I         + 
Sbjct: 352 LEIEQLQLGFLKMIKGTGIRKMADMHGFEYKSYPPYEVLSNKYISYGEILKLKDIEEMVE 411

Query: 250 AYEISNHSFLGAE 262
            Y  S +  +  E
Sbjct: 412 RYYNSGNFKMSME 424


>gi|300794023|ref|NP_001179620.1| CDK5 regulatory subunit-associated protein 1-like 1 [Bos taurus]
 gi|297489483|ref|XP_002697591.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1 [Bos
           taurus]
 gi|296474090|gb|DAA16205.1| CDK5 regulatory subunit associated protein 1-like 1 [Bos taurus]
          Length = 578

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    S + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGSSL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PALLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILHHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   ++  P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDTVLMEMKREYCVADFKRVVDFLKDKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   KM       +P++        L++   S +    
Sbjct: 385 FPSLFINQFYPRPGTPAAKM-----EQVPAQVKKQRTKELSRIFHSYNPYDH 431


>gi|86149347|ref|ZP_01067578.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88596431|ref|ZP_01099668.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|218563057|ref|YP_002344836.1| putative radical SAM domain family protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|123336653|sp|Q0P8G1|RIMO_CAMJE RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|85840129|gb|EAQ57387.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|88191272|gb|EAQ95244.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112360763|emb|CAL35562.1| putative radical SAM domain family protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|315930834|gb|EFV09826.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 439

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  +N   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFINYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRISVFAYSKEEDTAAFDM 335


>gi|283852062|ref|ZP_06369337.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
 gi|283572612|gb|EFC20597.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
          Length = 500

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C YC  D      +   G + +++     ++ +       ++  + F G     I 
Sbjct: 222 CPHRCTYCVND----AVKALYGAKGYLRW--RSVEHVIAELED-AVRRMPFIGYV--WIS 272

Query: 86  PQN-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
                   +A I +   +           +  +P+++          AG+  + +GVQS 
Sbjct: 273 DDAFFARPLATIREFCRQYKERIGLPFTCL-GSPATITPEKMDALVDAGMIYLQMGVQSG 331

Query: 141 EEQSLRFLGRN-HNASEAIAAIHLARNIFPRM---SFDLIYALPKQTMTQWEMELQRALS 196
             +     GR      + +AA+ +  +   RM   S+D+I   P +        ++    
Sbjct: 332 SARIQALFGRQSMGNDKILAAMAVINSYKDRMLPPSYDIILDTPYEVPADRLETVRFISR 391

Query: 197 Y-AVDHLSLYQLTIEKGTLFYKM 218
                 L L+ L +  GT    M
Sbjct: 392 IPKPFRLQLFSLVLYPGTKLAAM 414


>gi|237738316|ref|ZP_04568797.1| biotin synthase [Fusobacterium mortiferum ATCC 9817]
 gi|229420196|gb|EEO35243.1| biotin synthase [Fusobacterium mortiferum ATCC 9817]
          Length = 345

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 11/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     + F  S    M+ ++ +      S     G      + +
Sbjct: 40  CIKNCKYCG----IRRDNHKVDRFSMSKSEIMEAVKWIYENNYASIALQSGER----QDE 91

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS--- 144
                ++ + K     SN ++ I  +        ++ + +AG +R  L ++S        
Sbjct: 92  EFVSFIENLIKEIKNFSNGKLGITLSLGEQSKETYRRWFEAGAHRYLLRIESTNLDIYNH 151

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  +   H        +   R+I  ++   ++  LP QT      ++       +D + +
Sbjct: 152 LHPMDNKHTFEVRKKCLEYLRDIGYQVGTGVMIGLPNQTEEDLVNDILFYKDMNIDMIGM 211

Query: 205 YQLTIEKGTLFYKMH 219
               + K T   +  
Sbjct: 212 GPYILHKDTPLGQEW 226


>gi|195978729|ref|YP_002123973.1| Fe-S Oxidoreductase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975434|gb|ACG62960.1| Fe-S Oxidoreductase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 307

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVNQYLVYFQNFTNT---HDKLEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E + + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAELSERMHVTVELGLQTTYEATSQLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R   P ++    LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKETVQRLRQY-PNINIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 219 LLHLMTNTRMQRDYHEGRLQL 239


>gi|160872066|ref|ZP_02062198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli]
 gi|159120865|gb|EDP46203.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli]
          Length = 443

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 76/232 (32%), Gaps = 30/232 (12%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++N    +      + V     C K   YC F              +   L E+  +
Sbjct: 134 IEKFDNLPEPRAEGPRAL-VSIMEGCNK---YCSFCVVPYTRGEEISRPLDDVLAEVVHL 189

Query: 63  RQLTGPRSISSI----------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
            Q  G R I+ +           F GGT         A + D I     +   + I    
Sbjct: 190 SQQ-GVREITLLGQNVNDYQGPRFEGGT---------ADLADLIRYIAAIDDILRIRFTT 239

Query: 113 -NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P +      Q Y       N + L VQS  ++ L  + R +   E  + +   R + P
Sbjct: 240 SHPLAFSDRLIQAYADIPKLANHLHLPVQSGSDKILAAMKRGYTVLEFKSKLRQLRQVRP 299

Query: 170 RM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            +  S D I   P +T   +   LQ   S   DH   +  +   GT   ++ 
Sbjct: 300 TIAFSSDFIVGFPGETEADFRATLQLVESIGFDHSFSFIYSRRPGTPAAELP 351


>gi|92096943|gb|AAI14872.1| CDKAL1 protein [Bos taurus]
          Length = 416

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    S + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGSSL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PALLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILHHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   ++  P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDTVLMEMKREYCVADFKRVVDFLKDKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 385 FPSLFINQFYPRPGTPAAKM 404


>gi|24213805|ref|NP_711286.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
           interrogans serovar Lai str. 56601]
 gi|45658409|ref|YP_002495.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|81406958|sp|Q72PA4|MIAB_LEPIC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|81470597|sp|Q8F743|MIAB_LEPIN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|24194637|gb|AAN48304.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45601652|gb|AAS71132.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 449

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE---------NFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C +C    + R  +  ++         + +Q  + ++  + Q           F G
Sbjct: 164 CNNFCTFCV-VPYTRGRERSRDPKSIVREVQDLVQKGIRQITLLGQNVNSYKEQDTDFAG 222

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L++  +I  I           +++   +  NP                  I L +Q
Sbjct: 223 LIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRF-------------CPNIHLPLQ 269

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           +   + L  + R+++  E +  +   RNI P +    D+I   P +T  ++E  L     
Sbjct: 270 AGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVVRE 329

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
              D   +++ +  +GT+  + 
Sbjct: 330 VQFDMAFMFKYSEREGTMAQRK 351


>gi|88855436|ref|ZP_01130100.1| hypothetical protein A20C1_01396 [marine actinobacterium PHSC20C1]
 gi|88815343|gb|EAR25201.1| hypothetical protein A20C1_01396 [marine actinobacterium PHSC20C1]
          Length = 514

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 81/227 (35%), Gaps = 17/227 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 137 LESLDVFPSTLPTRRESTHSAWVSISVGCNNTCTFC----IVPALRGKEKD--RRAGDIL 190

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPS 115
             ++ +    +I     G    S       +   + +L        +          +P+
Sbjct: 191 SEVQAIVDDGAIEITLLGQNVNSYGVEFGDRQAFSKLLRATGAIDGLERVRF--TSPHPA 248

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRM 171
           +   +      +    + ++ + +QS  ++ L+ + R++ +++ +  +    A+     +
Sbjct: 249 AFTDDVIDAMAETPNVMPQLHMPLQSGSDRILKAMRRSYRSTKFLGILERVRAQMPHAAI 308

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           S D+I   P +T   +   L+            +Q +I +GT    M
Sbjct: 309 STDIIVGFPGETEEDFAETLRVVEEARFASAYTFQYSIREGTPAATM 355


>gi|116625676|ref|YP_827832.1| radical SAM domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228838|gb|ABJ87547.1| Radical SAM domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 439

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/236 (10%), Positives = 67/236 (28%), Gaps = 24/236 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C  +++ + ++     + +      ++             ++F     ++   
Sbjct: 198 CPYHCRWCSHSTYGKTHRRRSAMDVVNEVQWILERYAP-------EQVWFADDVFTI--- 247

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +   +    A+       V          V         + G +R+ +G +S  ++ L 
Sbjct: 248 -HHGWLDQYAAEMKRRGLRVPFECITRADRVNARVAAQLAELGCDRVWIGSESGSQRLLD 306

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R    ++   A+   +    R     ++    + ++  E   +   +   D      
Sbjct: 307 AMERGVTVAQVRDAVGQLKQNGIRTGMFFMWGYEGEELSDIEATYEHVKACQPDVFFTTI 366

Query: 207 LTIEKGTLFYKMHKDGDLVL------------PSENVAVDLYNLTQSITSAHGLHA 250
               KGT +Y+      + L                 +   Y L   +  +     
Sbjct: 367 SYPIKGTPYYEEVASKLVQLGEWRSTTDREVKIRGRRSRHFYQLADQLLRSETPDQ 422


>gi|227499809|ref|ZP_03929904.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
 gi|227218113|gb|EEI83381.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
          Length = 431

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 8/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R  +   +        ++  +       ++ I        L   +
Sbjct: 152 CNMYCSYC--LIPYARGNIVSRDMESIKEEAIRLAKNGYKEIVLTGIHVASYGKDLKNGK 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
            +  +++ +AK   +      ++E  P  +  +  +  +  +   +   L +QS  ++ L
Sbjct: 210 RLIDVIEEVAKTDGIERIRLSSME--PRHITKDFLERMKATRKACDHFHLSLQSGSDEIL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++       + L R +FP   ++ D+I   P +T        +           
Sbjct: 268 KAMNRKYDTEIYEQKVKLIREVFPNAGITTDIIVGFPTETEENHRQTKEFVKKIKFSKTH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           L++ +   GT    M  + D
Sbjct: 328 LFKYSKRDGTKAADMKPEVD 347


>gi|118471123|ref|YP_887063.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           smegmatis str. MC2 155]
 gi|229890566|sp|A0QVX5|MIAB_MYCS2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|118172410|gb|ABK73306.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium smegmatis
           str. MC2 155]
          Length = 512

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 82/262 (31%), Gaps = 22/262 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQ 53
           ++ L  + + +     ++   +V     C   C +C           V R        +Q
Sbjct: 148 VEALQEFPSALPASRESAYAAWVSISVGCNNTCTFCIVPSLRG--KEVDRRPGDILAEVQ 205

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           S + +      L G +++++       P L  P++       +     +     +     
Sbjct: 206 SLVDQGVLEITLLG-QNVNAYGVSFADPEL--PRDRGAFAKLLRACGGIDGLERVRFTSP 262

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIF 168
           +P+    +  +           + + +QS  ++ L+ + R++ A   +  I    A    
Sbjct: 263 HPAEFTDDVIEAMAATPNVCPTLHMPLQSGSDRILKAMRRSYRAERFLGIIDKVRAAIPH 322

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   ++  L             +Q +   GT    M          
Sbjct: 323 AAITTDLIVGFPGETEEDFQATLDVVEQARFAGAFTFQYSKRPGTPAADMPDQL-----P 377

Query: 229 ENVAVDLYNLTQSITSAHGLHA 250
           ++V  + Y     +     L  
Sbjct: 378 KSVVTERYQRLIELQERISLEQ 399


>gi|305432245|ref|ZP_07401408.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
 gi|304444593|gb|EFM37243.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
          Length = 439

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 75/200 (37%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   + +   + +   P+S      +     K  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIEGIKAARILYL--YPTSASEALIKRIIASKIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A + F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPDSFLRTG--FIVGHPGESDADFEEFCEFIKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|304413678|ref|ZP_07395122.1| 2-methylthioadenine synthetase [Candidatus Regiella insecticola
           LSR1]
 gi|304283769|gb|EFL92163.1| 2-methylthioadenine synthetase [Candidatus Regiella insecticola
           LSR1]
          Length = 475

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 71/227 (31%), Gaps = 20/227 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTP-- 81
           C K   YC F                  L E+  + +    R +     ++    G    
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAEQ-NVREVNLLGQNVNAYRGATYD 212

Query: 82  -SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            ++     +  ++  I        +      ++P     +  + Y      V+ + L VQ
Sbjct: 213 GNICSFAELLRLVAAIDGI-----DRVRFTTSHPIEFTDDIIKVYEDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  ++    
Sbjct: 268 SGSDRILTMMKRAHTALEYKAIIRKLRKARPDIQISSDFIVGFPGETQDDFEHTMKLIAE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
              D    +  +   GT    +  +       + + +    ++Q   
Sbjct: 328 VNFDTSYSFIYSSRPGTPAADLPDNVSEEEKKQRLHILQQRISQQAM 374


>gi|73538726|ref|YP_299093.1| radical SAM family protein [Ralstonia eutropha JMP134]
 gi|72122063|gb|AAZ64249.1| Radical SAM [Ralstonia eutropha JMP134]
          Length = 474

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  +C +C +   V  ++  +    +S + E++W+++      +  I F   T +  +P 
Sbjct: 207 CRSRCTFCLWPQTVGGHR-YRTRSAESVIAEVKWIKENMP--EVKEIMFDDDTFTDFKPR 263

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 264 VEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    E  +  A       + + 
Sbjct: 315 LNIKKGLRTDIARRFTEDCRKLGIQIHGTFILGLPGETQQTIEKTIAYAKEINPHTIQVS 374

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y+ 
Sbjct: 375 LAAPYPGTTLYQQ 387


>gi|323692752|ref|ZP_08106980.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
           WAL-14673]
 gi|323503194|gb|EGB19028.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
           WAL-14673]
          Length = 436

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 83/242 (34%), Gaps = 21/242 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C + C YC            +   I   + E++ +        + +   +   G   S  
Sbjct: 153 CNQFCSYC---IIPYTRGRVRSRAIGDVVKEVEGLAAAGYKEIVLTGIHLSSYGVDFSEE 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + +N+  ++  + K   +      ++E  P  +                   L +QS   
Sbjct: 210 KRENLLSLITCLDKIQGIERIRLGSLE--PRIITEEFVSALAGLKSICPHFHLSLQSGCN 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +L  + R++ A E +    + R  F    ++ D+I   P +T+ +++   +   +    
Sbjct: 268 ATLARMNRHYTAQEYLERCVILRKHFDNPAITTDVIVGFPGETVEEFDETKRFLETVRFY 327

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            + +++ +  +GT         +  +P ++ +V    L            Y     SFLG
Sbjct: 328 EMHIFKYSKREGT----RAAVMENQVPEQDKSVRSDILL--TLEHKMSDEYR---ESFLG 378

Query: 261 AE 262
            E
Sbjct: 379 KE 380


>gi|297183256|gb|ADI19395.1| 2-methylthioadenine synthetase [uncultured Spirochaetales bacterium
           HF0500_06B09]
          Length = 455

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 24/206 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------LTGPRSISSIFFGGGTP 81
           C  +C +C                + + L E + +        +    +I      G   
Sbjct: 157 CDNRCSFC---IIPFVRGRAISRPLAAILDEARQIIDDGFHEIVITGVNIGRYLHDGVNF 213

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANP--SSVEVNNFQGYRKAGVNRISLGVQS 139
           + +    I  +L    +     S++E   +  P    +               + L +QS
Sbjct: 214 ATL----IEKLLALPGQFRVRLSSLEPDHQIAPAIDLLTDERL-------CPHLHLCLQS 262

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +N       I  AR++ P ++   D++   P +T   +    +     
Sbjct: 263 GSDRVLLAMRRLYNLESFEQLIDNARHVRPDLNATTDILVGFPGETDADFAATCRAVERL 322

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
              H   ++     GT   +M    D
Sbjct: 323 GFTHCHTFRYAKRNGTRAARMENQVD 348


>gi|291548154|emb|CBL21262.1| RNA modification enzyme, MiaB family [Ruminococcus sp. SR1/5]
          Length = 375

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 24/238 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC            +   I+S L E++ + +      + +   G    S     
Sbjct: 88  CNQFCTYC---IIPYARGRVRSRNIESVLKEVRALAEKGYKEVVLT---GIHLSSYGVDF 141

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +    +L  I     +     I +    P  V     +G            L +QS  
Sbjct: 142 PEEKKETLLSLIRAVHEIEGIRRIRLGSLEPGIVTREFAEGIAALPKVCPHFHLSLQSGC 201

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++L  + R + + E      L R ++    ++ D+I   P+++  ++            
Sbjct: 202 DETLERMNRRYRSGEYRERCELLREVYGNPALTTDVIVGFPQESEEEFRKSYDFV----- 256

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA--YEISN 255
           D +  Y+  I K   + +        +  +    +    ++ +   H  HA  YE S 
Sbjct: 257 DSIRFYETHIFK---YSRRQGTKAAAMDGQLTEAEKSFRSEKMIELHHRHAGDYEKSM 311


>gi|167626244|ref|YP_001676744.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|229890537|sp|B0TXS4|MIAB_FRAP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|167596245|gb|ABZ86243.1| 2-alkenal reductase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 442

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 63/214 (29%), Gaps = 19/214 (8%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLGECAALAEQGVKEITLLGQNVNH-- 207

Query: 81  PSLIEP------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
              + P       ++AL++  IA+   +      T  ++P     N    Y       N 
Sbjct: 208 --YLGPMENGETADLALLIHFIAEIDGIERIRFTT--SHPVEFSQNLIDAYGSVPELANH 263

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEME 190
           + L VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  
Sbjct: 264 LHLPVQHGSDRVLINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKL 323

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +        D    +  +   GT    +  D  +
Sbjct: 324 MDLVKDVNFDQSFSFIYSKRPGTPAADLPDDTPM 357


>gi|159901008|ref|YP_001547255.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|238066313|sp|A9AZS3|RIMO_HERA2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|159894047|gb|ABX07127.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 469

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 82/234 (35%), Gaps = 26/234 (11%)

Query: 4   LSAYENNMTG---QGSNSLGVYVHWP-FCVKKCPYC---DF-----NSHVRRYKVGQENF 51
           L AY +  T    +       Y+     C  +C +C    F     +  V          
Sbjct: 152 LGAYGDWRTTAITRNKRGPSAYLKISDGCNLRCAFCTIPSFKGDMRSKAVGSILGEAREL 211

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           +++ + E+  + Q              G         + ++L+ +A     +      + 
Sbjct: 212 VEAGVQEIILVAQHLTDYGRDLGMKQNG---------LGVLLEELAAVVP-ADRWIRLMY 261

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           A P SV  +  +   +     + + + +Q     +LR + R  +  +  A ++  R   P
Sbjct: 262 AYPQSVTPDLVETMARLPQLCHYVDMPLQHAHPDTLRRMRRPPDTDKTKAIVNSLRQAMP 321

Query: 170 RMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            +S     I   P +T  +++  L+       D + +++ ++E GT+  ++   
Sbjct: 322 DLSLRTTFIVGYPGETRDEFKALLEFLEEMQFDRVGMFRYSLEPGTVAGELPDQ 375


>gi|229543808|ref|ZP_04432867.1| RNA modification enzyme, MiaB family [Bacillus coagulans 36D1]
 gi|229324947|gb|EEN90623.1| RNA modification enzyme, MiaB family [Bacillus coagulans 36D1]
          Length = 450

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVIAQAQKLVNAGYKELVLTGIHTGGYGQDLKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
           N+A++L D   K   +      +IEA+   +        + + V    + + +QS  +  
Sbjct: 210 NLAMLLKDLEEKVQGLKRVRISSIEAS--QLTDEVIDVIKHSKVVVRHMHVPIQSGSDTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   +    I   +   P ++   D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMDQFAERITKLKEALPGLALTSDVIVGFPGETEEEFMETYNFIKEHRFAEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 328 HVFPYSPRTGTPAARMKDQIDEEIKNERVHRMIALSDQLAKEYASQFENEVLEV 381


>gi|257076152|ref|ZP_05570513.1| oxidoreductase [Ferroplasma acidarmanus fer1]
          Length = 400

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 80/221 (36%), Gaps = 16/221 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP---FCVKKCPYCDFNSHVRRYKV---GQENFIQSF 55
           ++ S YE ++ G    S  +Y   P    C   C +C   SH+ R K+   G +  +   
Sbjct: 97  EFRSFYEGDLDGIEIKS-DIYDGIPINQGCTGSCNFC--ISHIARGKLLSRGIDKIVNQV 153

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             E+    +     S+ +  +G    + +  + +  I       +     +E     N  
Sbjct: 154 NMELDRNIKEIRISSLDTAAYGKDIGTDL-AELVNRISSIDRDFYLRVGMLEPR---NTY 209

Query: 116 SVEVNNFQGYRKAGV-NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
            +       YR   V   + L VQS E   L  + R +   EA A      + FP MS  
Sbjct: 210 DILDKLVDAYRHDRVFKFLHLPVQSAENNVLSAMNREYTIEEAEAVWQKFHDAFPDMSIA 269

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
            D+I      +   +E  ++    Y  D +++ + +    T
Sbjct: 270 TDIILGYYNDSRAGFEKTMKFLEKYNPDIINVTRFSPRPYT 310


>gi|332297279|ref|YP_004439201.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
 gi|332180382|gb|AEE16070.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
          Length = 611

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFGGGTPSLIEP 86
           C  +C YC         K  +   ++    ++Q+           +   F       ++ 
Sbjct: 215 CPFRCSYC----LSSIDKSVRFAPLERVFADLQFFLDAGCRLVKFTDRTFN------LDE 264

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           Q    I   I  +           E     +     +  R    G  +  +G+QS+  ++
Sbjct: 265 QRYLAIWQYIIDHHN--GKTVFHFEIAAQHLSDAALRLLRLVPDGAMQFEIGIQSIHPET 322

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L   GR  +     A I         +  DLI  LP +   Q+        +   D + L
Sbjct: 323 LAQAGRPCDPERLAAVIRRIPR-QIHVHLDLIAGLPYENFAQFSRSFDYTAALKPDMIQL 381

Query: 205 YQLTIEKGT---LFYKMHKDGDL 224
             L I  GT    F K     + 
Sbjct: 382 GFLKILSGTAMETFAKRQPGYEW 404


>gi|302804139|ref|XP_002983822.1| hypothetical protein SELMODRAFT_180500 [Selaginella moellendorffii]
 gi|300148659|gb|EFJ15318.1| hypothetical protein SELMODRAFT_180500 [Selaginella moellendorffii]
          Length = 469

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 96/323 (29%), Gaps = 49/323 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +  +  G+E   +   + ++ + +L           G    S  +  
Sbjct: 154 CNNMCAFC-----IVPFTRGRERS-RPLESIVREVGELWEQGVKEVTLLGQNVNSYCDLS 207

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-----------NPSSVEVNNFQGYRKAG--VNRIS 134
             + I          +S ++   E            +P     +     R+     N I 
Sbjct: 208 GFSAIYRTNESGLRFASLLKCLAETYPEMRFRFTSPHPKDFPDDLLLVMREHHNVCNSIH 267

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQ 192
           L VQS   + L  + R +     +  +   R I P +  S D I     +T       L 
Sbjct: 268 LPVQSGSSRVLERMRRGYTREAYLELVERIREIIPGVALSSDFIAGFCGETEEDHLQTLS 327

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +   +   ++  ++ + T  ++     D+    E V     +   +         Y 
Sbjct: 328 IVETVGYEMAYMFAYSMREKTPAHR----HDVDDVPEEVKQRRLSELIATFKRSSAARY- 382

Query: 253 ISNHSFLG--------AESLHNLNYWRYGDYIGIGPGA-----HSRVKVGSHRVAISIEK 299
              HS LG        A +  N N W           +      SR  V  H+    ++ 
Sbjct: 383 ---HSQLGKTQLVLIEAPNKRNPNEWGGR------CDSGQKVFFSRAPVPDHQSGDLVDT 433

Query: 300 HPESWLK-MVRKNGHAVVEKEFL 321
            P  ++   +     A +  E L
Sbjct: 434 KPGDYVAVKILDTTFASLRGEPL 456


>gi|295090679|emb|CBK76786.1| Fe-S oxidoreductase [Clostridium cf. saccharolyticum K10]
          Length = 290

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 77/215 (35%), Gaps = 9/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C+    + + K  +   +   + +++          +  +F   G   +++ 
Sbjct: 25  CAHNTCTFCN----MYKAKDFRVRSMDEIMEDLR-EAHDGYGAYVQKVFLADGDALVLQT 79

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  ILD + + +             +         +  ++AG+  + +G +S +++ L
Sbjct: 80  EKLLAILDAVRELFPNCVRVASYGTAQDILRKSEEELRQLKEAGLGIVYVGAESGDDEIL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLS 203
           R + +   A E   A    +    + S  LI  L  +           +   +   ++ S
Sbjct: 140 REINKGVTARELKEAGQKLKRCGIQTSVTLISGLGGRKKVKEHALACAELITAMNPEYAS 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              L + +GT  Y+   +G     + +  VD   +
Sbjct: 200 FLTLRLYEGTPMYEDVVEGRFERITADEIVDEMKI 234


>gi|239909038|ref|YP_002955780.1| short-chain dehydrogenase/reductase SDR family protein
           [Desulfovibrio magneticus RS-1]
 gi|239798905|dbj|BAH77894.1| short-chain dehydrogenase/reductase SDR family protein
           [Desulfovibrio magneticus RS-1]
          Length = 737

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 7/188 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +     G++  ++S    +  +        I   FF   T +  +P 
Sbjct: 217 CPSACIFC-----MTPKISGKKLRLRSPENILAELTDCYANHGIRDFFFKSDTFTF-DPA 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +   I  +  ++  +     +    ++ +     +KAG   ++ G +S   ++L  
Sbjct: 271 WTQAVCQAILAS-PLAGKIRWVANSKVKPLDKDTLVLMKKAGCWLVAFGYESGSPETLSR 329

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N    + I A   A+          +  LP +T    E   +       D L L+  
Sbjct: 330 IRKNTTIHDNIQATKWAKEAGLLTFGFFLIGLPWETREHLEATRKHIFELDNDFLELHIA 389

Query: 208 TIEKGTLF 215
               GT  
Sbjct: 390 IPYYGTRL 397


>gi|217978009|ref|YP_002362156.1| MiaB-like tRNA modifying enzyme [Methylocella silvestris BL2]
 gi|217503385|gb|ACK50794.1| MiaB-like tRNA modifying enzyme [Methylocella silvestris BL2]
          Length = 433

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C            + +  ++ L  ++ +        + +   G    S    +
Sbjct: 145 CDHRCTFC---IIPFARGPSRSSPAEAILASVRRLTDQGFREIVLT---GVDLTSYGQDL 198

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +  ++  I K       + ++   +    + + F  + +       + L +Q+ ++
Sbjct: 199 GDIRLGGLVKAILKAAPELERLRLS-SIDCIEADADLFSAFAEEPRLAPHLHLSLQAGDD 257

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H  ++A+      + + P + F  DLI   P +T   +E          + 
Sbjct: 258 MILKRMKRRHLRADAVRLCAELKRLRPDIVFGADLIAGFPTETEAMFENTASLIEDCGLA 317

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           +L ++  +   GT   KM 
Sbjct: 318 YLHVFPFSPRPGTPAAKMP 336


>gi|150401116|ref|YP_001324882.1| radical SAM domain-containing protein [Methanococcus aeolicus
           Nankai-3]
 gi|150013819|gb|ABR56270.1| Radical SAM domain protein [Methanococcus aeolicus Nankai-3]
          Length = 378

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGGGTPSLIE 85
           C  KC +C     +   KV   + I + L  +      +L  P +       G  P++ +
Sbjct: 152 CPHKCGFC-QTPQIFGNKVRHRS-IDNILKSINPNSDVRLITPNAFCYGSETGTKPNIEK 209

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
            + +   L          +      E  P  ++ +  +   K   N+ +  G QS  ++ 
Sbjct: 210 LELLLKKLREGKGKLFFGT---FPSEVRPEFIQKDTIELVAKYCHNKYLHFGAQSGSDEM 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R H  ++ +  + L ++       D I+  P +     +  ++           +
Sbjct: 267 LKLIRRGHTVNDVLNGVDLCKDYNLIPKVDFIFGFPNENEFHRKESMELLNYIIKKGGKV 326

Query: 205 YQLTIEK--GTLF 215
           +        GT F
Sbjct: 327 HAHYFMPLVGTNF 339


>gi|219114795|ref|XP_002178193.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409928|gb|EEC49858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 455

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 79/213 (37%), Gaps = 11/213 (5%)

Query: 8   ENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQL 65
           E++   +  +++  +V+  + C ++C +C          V Q    +S + E+ + + Q 
Sbjct: 147 EDSTKPRRQSTVAAWVNVIYGCNERCTFC---IVPTTRGVEQSRPAESIVREVTELVEQG 203

Query: 66  TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY 125
               ++           +I  +  + ++  + +   +     +T  ++P  + +      
Sbjct: 204 FKEITLLGQNIDAYGRDMIPKRKFSDLIRIVGEIPGLDRLRFVT--SHPRYMSLGVVDSV 261

Query: 126 RK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPK 181
            +  A      +  QS   + L  +GR H   + +  +   R+  P   ++ D+I   P 
Sbjct: 262 AETPAACECFHIPFQSGSNEILAAMGRGHTREKYLHIVDRIRSRIPDAAITADVIVGFPG 321

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +T  Q+E  L        D ++    +    T 
Sbjct: 322 ETEEQFEDTLSLMREVVFDSVNTAAYSPRPNTP 354


>gi|39936612|ref|NP_948888.1| coenzyme B12-binding elongator protein 3/MiaB/NifB
           [Rhodopseudomonas palustris CGA009]
 gi|39650468|emb|CAE28991.1| Coenzyme B12-binding:Elongator protein 3/MiaB/NifB
           [Rhodopseudomonas palustris CGA009]
          Length = 589

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C   +FN    R +  Q+         +  ++ L     I SI +        
Sbjct: 222 CRARCTFCTVRNFNGFGLRQRTVQD--------VIDEVKHLVTDHGIRSIDWLDDDLLWD 273

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +AL      +   +       + A   +++    Q    +G+    +GV+S  +  
Sbjct: 274 RERALALFRGLAEQVPGLEWTASNGLIA--VAIDDEVMQAMVASGLRAFKIGVESGNDAM 331

Query: 145 LRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + +     +  A   L AR     +S + I   P +T  Q       A+  A D  S
Sbjct: 332 LKTIKKPTTKPKLRARAELFARYPQVFVSTNFIIGFPDETFGQMMDSYDLAVELASDWAS 391

Query: 204 LYQLTIEKGTLFY 216
            Y     KGT  +
Sbjct: 392 FYICQPLKGTEMF 404


>gi|116747867|ref|YP_844554.1| RNA modification protein [Syntrophobacter fumaroxidans MPOB]
 gi|229891028|sp|A0LFB7|MIAB_SYNFM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|116696931|gb|ABK16119.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Syntrophobacter
           fumaroxidans MPOB]
          Length = 456

 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 77/229 (33%), Gaps = 20/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSI-----FFGGGTP 81
           C   C YC     V   +  + +      L E+ ++    G R +  +      +G G P
Sbjct: 168 CNNFCTYC----IVPHVRGRERSRAPDDILREIDFLASR-GAREVLLLGQNVNSYGRGLP 222

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQS 139
              +P +   +L  I K  ++      T  ++P  +  +  + +         + L  QS
Sbjct: 223 ---DPISFPDLLRRIGKETSIRRVRFTT--SHPKDLTEDLIECFAGLPFLCKHLHLPFQS 277

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             +  L+ + R + A + +  I   R + P +  S D+I   P ++   +   L+     
Sbjct: 278 GSDGILKLMHRGYTARQYLEKIARLREVCPEIALSTDVIVGFPAESEEDYLQTLRLIEEV 337

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
             D L  ++ +    T          + +    +A             +
Sbjct: 338 RFDSLFSFRYSDRPLTRAAGFPDKVPMDVKVRRLARLQSIQADITLQKN 386


>gi|327474549|gb|EGF19954.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK408]
          Length = 315

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|310779250|ref|YP_003967583.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ilyobacter polytropus DSM
           2926]
 gi|309748573|gb|ADO83235.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ilyobacter polytropus DSM
           2926]
          Length = 437

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 68/205 (33%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI---SSIFFGGGTPS 82
           C   C YC     +  Y  G+E  +     L E++   +      I    ++   G    
Sbjct: 155 CNNFCTYC-----IVPYVRGRERSVPMDQLLDEIKGFVEKGSKEIILLGQNVNSYGKDFE 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                N A +L+ I K       +   +  +P        +   K       + L +Q+ 
Sbjct: 210 --NKDNFAKLLEEICKIEG--EFIVRFMSPHPRDFTDELIEVIAKNDKIARSMHLPIQAG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +   E IA     +       ++ D+I   P +T   +   +  A    
Sbjct: 266 SSRVLGLMNRGYKKEEYIALAEKIKRSIPGSSITTDVIVGFPGETEEDFLDTIDVAKRVK 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            ++  ++  +  KGT   +M    D
Sbjct: 326 FENAYMFMYSPRKGTKAAEMDGQID 350


>gi|254525438|ref|ZP_05137490.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prochlorococcus marinus
           str. MIT 9202]
 gi|221536862|gb|EEE39315.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prochlorococcus marinus
           str. MIT 9202]
          Length = 464

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 70/235 (29%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  +  +  +E+Q +      + I+ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPNAIKSEIQKLAN-DNFKEITLLGQNIDAYGRDLPG 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     I     +P        Q   +         +  Q
Sbjct: 226 TTKEGRKENTLTDLLYYIHDVEGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +   +    I   R++ P  S   D I A P ++  Q+   L+    
Sbjct: 286 SGNNEILKLMARGYTIDKYKRIIENIRSLMPNASITADAIVAFPGESEEQYRDTLKLISD 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D +     +    T          +    +   +   N     TS      Y
Sbjct: 346 IGFDQVMTAAYSPRPNTP--AALWHNQISEEVKKERLKEINELVETTSKQRNARY 398


>gi|172039008|ref|YP_001805509.1| hypothetical protein cce_4095 [Cyanothece sp. ATCC 51142]
 gi|171700462|gb|ACB53443.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 478

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 71/191 (37%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  ++   ++  ++   EM   + + G  S+   FF   T ++    
Sbjct: 207 CPAKCTFCLWPQTIGGHQYRAKSP-EAVGKEMALAKSIWGN-SVREYFFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   ++        ++        AN   ++ +  +  R  G+  + +G +S  +  L  
Sbjct: 261 DKKRVIAISEHLKKLNLTWSCNARAN---LDYDTLKTLRDNGLRLLLVGFESGNQGVLDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   ++    +  ++    I  LP ++    E  ++ A   +   + +   
Sbjct: 318 VKKGIKLEVARKFMNNCNKLGIKVHGAFILGLPNESKETIEDTIRFACEVSPHTIQVSIA 377

Query: 208 TIEKGTLFYKM 218
           +   GT  YK 
Sbjct: 378 SPYPGTELYKQ 388


>gi|86609485|ref|YP_478247.1| tRNA modifying protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558027|gb|ABD02984.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 494

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C     +   +  Q    I+S L E + + +      +  +       +    
Sbjct: 200 CNYRCSFC----IIPHLRGDQRSRSIESILREAEQLAEEG----VQELILISQITTHYGI 251

Query: 87  QNI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
                  + D I     +       + A P+ V     +  ++    +  + L +Q    
Sbjct: 252 DLYGEPRLADLIRALGKIPIPWIRMLYAYPTGVTPAVVEAIQETPNFLPYLDLPLQHSHP 311

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L+ + R          I   R   P        I   P +T   ++  L     +  D
Sbjct: 312 QILKAMNRPWQGQVNDRVIERLRQALPNAVLRTSFIVGFPGETEEHFQHLLDFVQRHQFD 371

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
           H+ ++  + E+GT  Y +   
Sbjct: 372 HVGVFTFSPEEGTPAYHLPHQ 392


>gi|239813975|ref|YP_002942885.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Variovorax
           paradoxus S110]
 gi|239800552|gb|ACS17619.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus
           S110]
          Length = 454

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   L E+  +    G R ++ +      + G    
Sbjct: 155 CSKYCSYC---VVPYTRGEEVNRPLDDVLVEIAGLADQ-GVREVTLLGQNVNAYRGRMGD 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+++ +A+   +      T  ++P+       + Y K    V+ + L VQ  
Sbjct: 211 TAEIADFALLIEYVAEIPGIERIRYTT--SHPNEFTPRLIEAYAKVPQLVSHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + +    A      +S D I   P +T   +   ++      
Sbjct: 269 SDRILMAMKRGYTAMEYKSTVRKLRAIRPELALSSDFIVGFPGETDEDFAKMMKLIDDCQ 328

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    + 
Sbjct: 329 FDNSFSFIFSPRPGTPAAALQ 349


>gi|187779001|ref|ZP_02995474.1| hypothetical protein CLOSPO_02596 [Clostridium sporogenes ATCC
           15579]
 gi|187772626|gb|EDU36428.1| hypothetical protein CLOSPO_02596 [Clostridium sporogenes ATCC
           15579]
          Length = 445

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 78/238 (32%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC        +  R K      +++   + ++ +  +    ++  I   G    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRSKENILKEVENLAKQGVKEIILIAQDTTMYGIDIYG---- 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               + +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 212 ---KKVLHELLRDISKVEGVKWIR--LLYCYPEEITKELIKEIKNNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIINIIKELRKEIEGITLRTSLIVGFPGETEEEFSELKEFVSDIK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT         ++       E + +    +++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMEDQIEEEVKEKREEEIMILQQKISKDINKEKIGKIYEV 384


>gi|149196890|ref|ZP_01873943.1| Fe-S oxidoreductase family 2 [Lentisphaera araneosa HTCC2155]
 gi|149140000|gb|EDM28400.1| Fe-S oxidoreductase family 2 [Lentisphaera araneosa HTCC2155]
          Length = 529

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 15/224 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C               FI   L +++   Q       + +     T ++   +
Sbjct: 166 CPNRCSFC------TSSLDTVLRFIP--LDDVRKHLQKIAKIGTTEVRILDRTFNIKSSR 217

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
            +  ++    + +     +    E +P+ V        ++   G   I  G+Q+  + + 
Sbjct: 218 TL-KLMQMFREEF---PQLRFHCEVDPALVTDEFLHELKQMPKGQMHIETGLQTFSQDTY 273

Query: 146 RFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R       +  + +  ++    +  DLI  LP  T      +L   ++     + L
Sbjct: 274 DTVQRRSPMDRTVKGLQILCDLENVEIHGDLIGGLPGATRESQLNDLLALIALEPAEIQL 333

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L +  GT   +  +      P   V          +T     
Sbjct: 334 ENLKLLPGTPMCEYKEIVAAPTPPYEVLRTATMNYDELTQVAEW 377


>gi|134093658|ref|YP_001098733.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Herminiimonas
           arsenicoxydans]
 gi|229890608|sp|A4G267|MIAB_HERAR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|133737561|emb|CAL60604.1| putative tRNA-i(6)A37 thiotransferase enzyme MiaB [Herminiimonas
           arsenicoxydans]
          Length = 446

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R +     F            Q     ++           + + +
Sbjct: 157 CSKYCSYC--VVPYTRGEEVSRRFDDVLTEVAGLEAQGVKEITLLGQNVNAYRGEMADGE 214

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + AL+++ IA+   +     +T  ++P          Y K    V+ + L  Q   ++
Sbjct: 215 IADFALLIEYIAEMEGIERIRYVT--SHPKEFTQRLIDTYAKVPKLVDHLYLPAQHGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + + E  + +   R + P +S   D I   P +T   +E  ++       D+
Sbjct: 273 ILAAMKRGYTSLEYKSILRRLRAVRPNISISSDFIVGFPGETDEDFEAMMKLIDDIGYDN 332

Query: 202 LSLYQLTIEKGTLFYKM 218
              +  +   GT    +
Sbjct: 333 SFSFIFSPRPGTPAANL 349


>gi|239904934|ref|YP_002951672.1| cobalamin vitamin B12-binding domain/radical SAM domain protein
           [Desulfovibrio magneticus RS-1]
 gi|239794797|dbj|BAH73786.1| cobalamin vitamin B12-binding domain/radical SAM domain protein
           [Desulfovibrio magneticus RS-1]
          Length = 532

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 68/200 (34%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC+  +    ++ G   + +       M  +R +                 L +
Sbjct: 226 CPHGCAYCNVPTVKALFRGGGVPYFRHRGVPHVMAELRGIIARYPFIEAIQ------LFD 279

Query: 86  PQNIALILDGIAKN---WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
               +  LD + +    +     + +  +A+P++++        +AG+  + +G+Q+   
Sbjct: 280 DTFFSRRLDWLREFAAAYKADIGLPLYCQASPTTLDAEKLDVLIEAGLCYVEMGIQTGSP 339

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM---SFDLIYALPKQTMTQWEMELQRALSY-A 198
           +      R  +    +A  +L  +   ++    + +I   P +T       ++       
Sbjct: 340 RMREIFRRPEDDDAVLAGANLLHSRRDKLLPPDYHVIIDAPWETEEDLLATVRLLARLPK 399

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L++  L     T  Y+ 
Sbjct: 400 PFGLAIASLVYFPETELYRR 419


>gi|227486728|ref|ZP_03917044.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235316|gb|EEI85331.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 432

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C   C YC                + S + E + + +      + +   +   G      
Sbjct: 152 CNMYCSYC---LIPYARGNVVSRPMDSIVKEAERLAENGFKEIVLTGIHVASYGKDF--- 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
             ++   ++D I     V     I +    P  +  +  +  +  K   +   L +QS  
Sbjct: 206 --KDGISLIDVIENVAKVDGIKRIRLSSMEPRHITRDFLERMKATKKACDHFHLSLQSGS 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR + R ++         L R IFP      D+I   P +T    +  +        
Sbjct: 264 DDVLRAMNRKYDTKVFKEKTDLIREIFPNAGLTTDIIVGFPGETEANHQETMAFVKEIKF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
               L++ +   GT    M    D
Sbjct: 324 AKTHLFKYSKRDGTRAATMKGQVD 347


>gi|221232993|ref|YP_002515429.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
           crescentus NA1000]
 gi|220962165|gb|ACL93521.1| tRNA 2-methylthioadenosine synthase [Caulobacter crescentus NA1000]
          Length = 448

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 21/205 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                +   + E + +    G R ++ +      + G   +
Sbjct: 165 CDKFCTFC---VVPYTRGGEWSRPVNDIVEEAKRLADQ-GVREVTLLGQNVNAYDGDGST 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +A ++  +AK   +      T  ++P  +  +  + + +    +  + L VQ+ 
Sbjct: 221 ------LAKLVRQLAKIDGLDRIRYTT--SHPRDMGDDLIEAHGELPELMPYLHLPVQAG 272

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H A   +  I   R   P ++   D I   P +    +E  L+      
Sbjct: 273 SDKILKAMNRDHTAESYVKLIEKIRAARPDIAMSGDFIVGFPGERDGDFEKTLELVREVG 332

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT    M    D
Sbjct: 333 FASAFSFKYSRRPGTPASAMPGQVD 357


>gi|295696216|ref|YP_003589454.1| MiaB-like tRNA modifying enzyme YliG [Bacillus tusciae DSM 2912]
 gi|295411818|gb|ADG06310.1| MiaB-like tRNA modifying enzyme YliG [Bacillus tusciae DSM 2912]
          Length = 442

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 67/220 (30%), Gaps = 24/220 (10%)

Query: 28  CVKKCPYCD-------FNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C   C +C        F S      V +   + +  + E+  + Q +    +  ++    
Sbjct: 156 CDHGCTFCAIPLMRGKFRSRPIPSIVEEARRLAADGVREISLIAQDSTQYGLD-LYGRRR 214

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P L++  N    L  I  ++           A P                    + L +
Sbjct: 215 LPDLLKALNDVDELRWIRLHY-----------AYPGYFTDELIDAMAGLPKVCKYVDLPL 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  E++ LR + R    S+    +   R   P ++     I   P +T  Q+        
Sbjct: 264 QHSEDEILRAMHRPGRNSQVRKLLERIRTRIPNVAIRSSFIVGFPGETEEQFLRLADFVE 323

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             A D + ++  + E+GT    M             A  +
Sbjct: 324 EMAFDRIGVFAFSREEGTPSAAMEGQISEAEKERRAAWLM 363


>gi|157149689|ref|YP_001450938.1| radical SAM family protein [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074483|gb|ABV09166.1| radical SAM protein, TIGR01212 family [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 312

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 99  IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 158

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + PR  +   LI  LP +T       ++R +    +  + L+
Sbjct: 159 NRAHSYELYVETVQRVRKLAPRAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 219 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 263


>gi|147902192|ref|NP_001084956.1| CDK5 regulatory subunit-associated protein 1-like 1 [Xenopus
           laevis]
 gi|82185344|sp|Q6NS26|CDKAL_XENLA RecName: Full=CDK5 regulatory subunit-associated protein 1-like 1
 gi|47122802|gb|AAH70521.1| MGC78779 protein [Xenopus laevis]
          Length = 556

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        E  +       Q         S  +  +G    + + 
Sbjct: 210 CLNACTYCK-TKHARGELASYPVEELVDRATQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 267

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 268 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 321

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  L+    Y 
Sbjct: 322 SDSVLMDMKREYCIADFKRVVDFLKERVPGITIATDIICGFPGETDEDFKETLKLVEEYK 381

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 382 FPSLFINQFYPRPGTPAAKM 401


>gi|325291304|ref|YP_004267485.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324966705|gb|ADY57484.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 599

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 77/256 (30%), Gaps = 31/256 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS------FLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C +C          +    +++S          +Q+  +       +         
Sbjct: 191 CPFHCSFC------ISSALKGVRYLESSKFRAILRNILQYGARTVKFVDRTFNVRKAHAF 244

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKA--GVNRISLGVQ 138
           ++++        +  AK      +V     E     ++ +          G+ ++ +GVQ
Sbjct: 245 AILDI-----FKEEAAKYAGAGQDVPRAHCEMAGELLDEDWLDYLAAYPKGMLQLEIGVQ 299

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           S  + +L  + R  N  +    I          +  DLI  LP++   +++         
Sbjct: 300 STFQPTLEAIARRQNFEDWQEKIRKIQHEDNIPVHLDLIAGLPEEGPAEFKKSFNDVYKV 359

Query: 198 AVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITS----AHGLHA 250
             D L L  L + KG+        +    L  P   V        Q I         L  
Sbjct: 360 RPDRLQLGFLKVLKGSALESQSIEYGITYLPDPPYTVLQTKCLSHQEILELTRIEELLEK 419

Query: 251 YEISN---HSFLGAES 263
           Y  S    +S   AES
Sbjct: 420 YYNSAIFSYSLKYAES 435


>gi|260587655|ref|ZP_05853568.1| radical SAM domain protein [Blautia hansenii DSM 20583]
 gi|331084055|ref|ZP_08333162.1| hypothetical protein HMPREF0992_02086 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541920|gb|EEX22489.1| radical SAM domain protein [Blautia hansenii DSM 20583]
 gi|330402417|gb|EGG81987.1| hypothetical protein HMPREF0992_02086 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 299

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 80/221 (36%), Gaps = 5/221 (2%)

Query: 28  C-VKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   KC +C        ++K+     I++ L E++   +L     ++  F  G  P +++
Sbjct: 25  CTHHKCKFCTLYDDIPFQFKMSPMEDIEADLQEVKGQFRLWNDNKVTRTFLVGANPFVLK 84

Query: 86  PQNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              +  I   I K +  + N+   +   + +           KAG + +++G+++ ++ +
Sbjct: 85  ATRLLQIASLIQKYFPTNKNIGCFSRITDIALKTDEELLKLSKAGYDGLTIGIETGDDDA 144

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHL 202
           L+F+ + + A + I       N+    +F  +  +    +     +             +
Sbjct: 145 LKFMNKGYEAKDIITQCKRLDNVGITYNFFYLTGISGIGKGEQGAKDTADICNQLHPQII 204

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
               LTI   +  Y+  + G+    +E              
Sbjct: 205 GANMLTIYPNSELYQEIQKGNWQEETEIEKYKELRTLVRYL 245


>gi|328946867|gb|EGG41004.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK1087]
          Length = 315

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMILENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQDEYVSIICDQLEIIPEHIVIH 266


>gi|326334454|ref|ZP_08200666.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325693421|gb|EGD35348.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 481

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 84/236 (35%), Gaps = 29/236 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQ-------LTGPRSISSIFFGG 78
           C   C +C     +  +  G+E      S + E+  ++Q       L G    S +++GG
Sbjct: 178 CDNMCTFC-----IVPFTRGRERSRDPHSIINEIAELQQRGYKEITLLGQNVDSYLWYGG 232

Query: 79  GT------PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           G        S I      N A +LD +A  +        T  +NP  + ++      K  
Sbjct: 233 GLKKDFEKASDIQKVTAVNFAKLLDIVASEFPKMRIRFST--SNPQDMTLDVIDTMAKHH 290

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L VQS   + L+ + R H   E  A I   R   P   +S D+I   P +T  
Sbjct: 291 NICKYIHLPVQSGSNRILKAMNRLHTREEYFALIDGIRERIPDCAISQDMITGFPTETEE 350

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +  L        D   ++  +   GTL  +   D       +    ++ +L Q 
Sbjct: 351 DHQDTLSLMEYVKYDFGFMFAYSERPGTLAARKILDDVPEEVKKRRLAEIIDLQQK 406


>gi|262038001|ref|ZP_06011413.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264]
 gi|261747954|gb|EEY35381.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264]
          Length = 454

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 30/254 (11%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F    +  K      +   L E++ +      R +  +        L+
Sbjct: 170 CPHHCDFCYKDAFY---QNGKSFYTRLVDDALKEIESL----PGRHLYFLDDH-----LL 217

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
             P+    + +G+     V              +  +  +   +AG+  I +G ++   +
Sbjct: 218 GNPKFAKELFEGMKGMNRVFQGAATIDSI----LTGDTIEKAAEAGLRSIFVGFETFSPE 273

Query: 144 SLRFLGRNHNAS-EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L+   ++ N   + I  ++   ++   ++   ++ L       ++  +   +  A+   
Sbjct: 274 NLKQSNKSQNLQRDYIKVVNRLHSLGIMINGSFVFGLDNDDKDVFKRTVDWGVKNAITTS 333

Query: 203 SLYQLTIEKGTLFYKMH--------KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + + LT   GT  +K          ++ DL      V        Q +   +     E  
Sbjct: 334 TYHILTPYPGTRLFKRMEEDGRITTRNWDLYDTRNVVYKTKNLTPQELKEGYNWAYKEFY 393

Query: 255 NHSFL-GAESLHNL 267
               +  A S HNL
Sbjct: 394 TWKNIFEAISNHNL 407


>gi|225375407|ref|ZP_03752628.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
           16841]
 gi|225212743|gb|EEG95097.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
           16841]
          Length = 438

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 14/229 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +  +  G+     S    ++ +++L        I   G   S     
Sbjct: 157 CNQFCSYC-----IIPFARGRVRSRNS-EDVIREVKRL-AEHGFREIVLTGIHLSSYGVD 209

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +L  I +   V     I +    P  V                   L +QS  + +
Sbjct: 210 TGDNLLHLIREVHNVDGIERIRLGSLEPRIVTDGFAAALAGLPKICPHFHLSLQSGCDAT 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++  E      + R  F    ++ D+I   P +T  ++ +  +         +
Sbjct: 270 LQRMNRRYDTREYEEGCQILRKYFDHPAITTDVIVGFPGETEEEFAVTKEYLKRIHFYEM 329

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            ++Q +  +GT       +  +  P +    ++    +   S      Y
Sbjct: 330 HIFQYSKREGTK--AAVMEHQVPEPVKKERSNILLALEKKMSEEFREYY 376


>gi|91787018|ref|YP_547970.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Polaromonas
           sp. JS666]
 gi|123355998|sp|Q12EH0|MIAB_POLSJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91696243|gb|ABE43072.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaromonas sp. JS666]
          Length = 447

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC       R +     F    +       Q     ++   +   + G      
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYRGPMGDTA 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + A +L+ ++    +     +T  ++P+    +    Y +    VN + L VQ   +
Sbjct: 213 EIADFATLLEYVSDIPGIERIRYVT--SHPNEFTQSLIDAYARLPKLVNHLHLPVQHGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      MS D I   P +T   +   ++       D
Sbjct: 271 RILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFNKMMKLIDDVGYD 330

Query: 201 HLSLYQLTIEKGTLFYKMH 219
               +  +   GT    +H
Sbjct: 331 TSFSFIYSPRPGTPAAALH 349


>gi|254486731|ref|ZP_05099936.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. GAI101]
 gi|214043600|gb|EEB84238.1| MiaB-like tRNA modifying enzyme [Roseobacter sp. GAI101]
          Length = 418

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 25/205 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDKGFNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           S  EP     +  IL  +     +  +   +IE     V+ N  +        +  + L 
Sbjct: 202 S--EPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDDNLMKAIATEPRLMPHLHLS 254

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+  
Sbjct: 255 LQHGDDMILKRMKRRHLRDDAIRFSEEARKLRPDMTFGADIIAGFPTETDAMFENSLKLV 314

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
               +  L ++  +  +GT   +M 
Sbjct: 315 QDCDLTWLHVFPYSARQGTPAARMP 339


>gi|182419334|ref|ZP_02950586.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237666769|ref|ZP_04526754.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376665|gb|EDT74237.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237657968|gb|EEP55523.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 351

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 65/190 (34%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR     + +  +    + + ++        ++   GG       +
Sbjct: 60  CKRNCMYCG----LRRDNANLKRYRLTEEEIIDFAKKAVQ-YGYKTLVLQGGEDDYFTTE 114

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  I           + +  +      + ++ ++ AG +R  + +++ +++    
Sbjct: 115 KMVSIIKKIKSLG-------VALTLSLGEKTFDQYKAFKNAGADRYLIRIETTDKKLYET 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +    + +E I  +     +   +   ++  LP QT+     ++        D + +   
Sbjct: 168 MDPGMSFNERIQCLKDLDKLGYEVGSGILIGLPGQTLESIAKDILFFKEINADMIGIGPF 227

Query: 208 TIEKGTLFYK 217
              + T    
Sbjct: 228 IPNEDTPLKN 237


>gi|94312339|ref|YP_585549.1| radical SAM family protein [Cupriavidus metallidurans CH34]
 gi|93356191|gb|ABF10280.1| Radical SAM [Cupriavidus metallidurans CH34]
          Length = 473

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  ++  +    QS + E++W+++      +  I F   T +  +P 
Sbjct: 206 CRSRCTFCLWPQTVGGHR-YRTRSAQSVIDEVKWIKENMP--EVREIMFDDDTFTDFKP- 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + +       +        +AN   V  N  +  ++ G+  + +G +S ++Q L  
Sbjct: 262 ---RVEEIARGLGEIGLPWSCNAKAN---VPYNTLKIMKENGLRLLLVGYESGDDQILLN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A       R +  ++    I  LP +T    E  ++ A       + +   
Sbjct: 316 IKKGLRTDIARRFTEDCRKLGIQIHGTFILGLPGETRDTIEKTIEYAKEINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  YK 
Sbjct: 376 APYPGTTLYKQ 386


>gi|329924074|ref|ZP_08279337.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5]
 gi|328940913|gb|EGG37221.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5]
          Length = 447

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 68/200 (34%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + +   +        + +    GG    +E  
Sbjct: 153 CNNFCTFC---IIPWSRGLSRSRDPKSIIKQAHQLVGAGYKEIVLTGIHTGGYGDDLEDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            ++ +L  + +   +      +IEA+   ++        ++      + + +Q+ ++  L
Sbjct: 210 RLSDLLWDLDRVDGLERIRISSIEAS--QIDEKMLDVLNRSSKMCRHLHIPLQAGDDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    + L R   P +    D+I   P +T   +        +     + 
Sbjct: 268 KRMRRKYTTEEFYNKMGLIRQAMPDVGITTDVIVGFPGETEEMFRNGYDLMKAIQFSEMH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSKRTGTPAARMEDQVD 347


>gi|260591614|ref|ZP_05857072.1| Fe-S oxidoreductase [Prevotella veroralis F0319]
 gi|260536414|gb|EEX19031.1| Fe-S oxidoreductase [Prevotella veroralis F0319]
          Length = 454

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 67/191 (35%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I S + + +   +  G   + + +  G    +    
Sbjct: 172 CNYFCTYC---TIPYARGFSRNPSIASLVQQAEEAAKEGGKEIVLTGVNIGDFGET--TG 226

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           +    ++  + K   +      ++E  P  ++ +  +     +A +    + +QS  ++ 
Sbjct: 227 ERFLDLVKALDKVEGIERFRISSLE--PDLIDDDLIEYCAQSRAFMPHFHIPLQSGSDEV 284

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++       I+L +   P   +  D++     +    +E       S  V  L
Sbjct: 285 LKLMHRRYDTKLFAHKINLIKEKMPDAFIGVDVMVGSRGERPEYFEDCYNFLASLPVTQL 344

Query: 203 SLYQLTIEKGT 213
            ++  +   GT
Sbjct: 345 HVFPYSERPGT 355


>gi|325687101|gb|EGD29124.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis SK72]
 gi|327470440|gb|EGF15896.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK330]
          Length = 315

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIICDQLEIIPEHIVIH 266


>gi|206901571|ref|YP_002251173.1| hypothetical protein DICTH_1354 [Dictyoglomus thermophilum H-6-12]
 gi|238065337|sp|B5YF65|RIMO_DICT6 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|206740674|gb|ACI19732.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
          Length = 440

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 20/234 (8%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           S +  VYV     C   C YC   +        +   I   + E++ + Q    + +  I
Sbjct: 141 SPNFWVYVKISEGCNNFCSYC---TIPFIRGRLRSRSIDDIIKEVEILVQ----KGVKEI 193

Query: 75  FFGGGTPSLIEPQNIAL--ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYR--KAG 129
                  +           ++D +     +  +  + I  + PS V  +     +  +  
Sbjct: 194 NLIAQDTTRYGEDLYGKSALVDLLKSIENIKGDFYVRILYSYPSRVTKDLINFIKVSEKV 253

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
           V    + +Q + ++ L+ + R++   + I      R  F    +   ++   P +T   +
Sbjct: 254 VPYFDIPIQHVNDEILKKMNRSYKKDDIIRVWSTIRENFEDAVIRTTVMVGFPGETEENF 313

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           E  +    +Y  D L  +    E+GT+        D     E+  +  Y++  S
Sbjct: 314 EELIAFIKAYPFDRLGAFTYYNEEGTISKNFDGQID-----EDEKIRRYDILMS 362


>gi|110598491|ref|ZP_01386761.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
 gi|110339864|gb|EAT58369.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
          Length = 497

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 77/237 (32%), Gaps = 15/237 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  +   L EM++ +       I+  F          PQ
Sbjct: 235 CPVGCNFCTTPTIYGKNYRYRE--LDLVLDEMRYHQNRLNKEKINFSFMDDNI--SFRPQ 290

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +AK       V      + + ++         ++G + +S+G +SL  ++L+
Sbjct: 291 YFFTLLEEMAKL-----GVNWNANISMNFLDKPEVAELAGRSGCDLLSIGFESLNPETLK 345

Query: 147 FLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N        +         +    ++     T   +++     +   ++     
Sbjct: 346 SVHKGSNRLGNYEKVVSNLHKNGIAIQGYFMFGFDNDTEESFQLTYDFIMKNRIEFPVFS 405

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +T   GT ++   K        +      Y    +  S   L    +SN   L  E
Sbjct: 406 LVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPNKMSGEKL----LSNFVKLQKE 458


>gi|323351030|ref|ZP_08086687.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           VMC66]
 gi|322122754|gb|EFX94463.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           VMC66]
          Length = 315

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPEETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|238924014|ref|YP_002937530.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium rectale ATCC
           33656]
 gi|238875689|gb|ACR75396.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium rectale ATCC
           33656]
          Length = 479

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ + +L        +  G        +L
Sbjct: 195 CNNFCSYC-----IVPYVRGRERS-REPKDIIREIEKLVADGVCEIMLLGQNVNSYGKTL 248

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  + K   +       + ++P  +  +     ++       + L +QS  
Sbjct: 249 DNPITFAELLREVNKIEGLKRIRF--MTSHPKDLSDDLIMAIKECDKVCKHMHLPLQSGS 306

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +  +   R   P ++   D+I   P +T   +   +        
Sbjct: 307 SRVLKEMNRHYDKEKYLDEVKRLREQIPDIAITTDIIVGFPGETEEDFLETMDVVKQVRY 366

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 367 DSAFTFIYSKRTGTRAATM 385


>gi|229890671|sp|A4VQY3|MIAB_PSEU5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 437

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 22/263 (8%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +             +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPLADVLAEIVHLAENGVKEVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                 +  + A +L  +A    +      T  ++P        Q +      V  + L 
Sbjct: 206 YRH---DGHDFADLLHAVAAIDGIGRIRYTT--SHPLEFSDAIIQAHADIPQLVKYLHLP 260

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQ+  ++ L  + RNH A E  + I   +   P +  S D I   P +T   +E  ++  
Sbjct: 261 VQAGSDRILAAMKRNHTALEYKSRIRRLKAAVPDILISSDFIVGFPGETDKDFEQTMKLI 320

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL-----H 249
                D    +  +   GT    +  D    +  + +A+    + Q              
Sbjct: 321 EDVGFDFSYSFVYSARPGTPAADLADDTPEEVKKQRLAILQQRINQQGFENSRRMVGTTQ 380

Query: 250 AYEISNHSFLG-----AESLHNL 267
              +S++S          + HN 
Sbjct: 381 RILVSDYSKKDPGMLQGRTEHNR 403


>gi|114766591|ref|ZP_01445547.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelagibaca bermudensis
           HTCC2601]
 gi|114541207|gb|EAU44259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. HTCC2601]
          Length = 435

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 13/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K   +C F                  LTE + + +    R +  +   G   +     
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRVLTEARDLVE----RGVRELTLLGQNVNAYHGH 211

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +   +   I +   +     I     +P+ ++ +    +      +  + L VQ+  ++ 
Sbjct: 212 D-RGLAGLIRELAKIDGLERIRFTTSHPNDMDDDLIAAHGDCDKLMPYLHLPVQAGSDRI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H A + +  I   R   P   +S D I   P++T   +   +    +      
Sbjct: 271 LKRMNRQHTAEQYLRLIERLRAARPDLHLSGDFIVGFPEETEEDFRDTMALIEAVQYGSA 330

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
             ++ +   GT   +  +  +
Sbjct: 331 FSFKYSERPGTPAAERPQVSE 351


>gi|86152551|ref|ZP_01070756.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|85843436|gb|EAQ60646.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni HB93-13]
          Length = 439

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L+ + R  N++     ++L +++    +    I   P ++   +E        +  D
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSVPNSFLRTGFIIGHPGESEADFEELCAFVKDFGFD 317

Query: 201 HLSLYQLTIEKGTLFYKM 218
            +S++  + E+ T  + M
Sbjct: 318 RISVFAYSKEEDTAAFDM 335


>gi|237796070|ref|YP_002863622.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum Ba4
           str. 657]
 gi|229260913|gb|ACQ51946.1| putative cobalamin-dependent enzyme [Clostridium botulinum Ba4 str.
           657]
          Length = 559

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + + I+    E++++      +++  I F   T +     
Sbjct: 183 CPFKCKYC----LSSTLHGVRFHDIERVKKEIKFLV----DKNVKLIKFVDRTFNC---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
           N    +        + ++     E +   +     +   K    RI    GVQ+   + L
Sbjct: 231 NHKFAMGIWEYILNLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVL 290

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R+ N       +   +N+   +   DLI  LP +    ++       S   + + L
Sbjct: 291 KNINRHVNFETIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQL 350

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L + KG+      +         P   +        + + 
Sbjct: 351 GFLKLLKGSSMRLEAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|254525092|ref|ZP_05137147.1| putative coproporphyrinogen III oxidase [Stenotrophomonas sp.
           SKA14]
 gi|219722683|gb|EED41208.1| putative coproporphyrinogen III oxidase [Stenotrophomonas sp.
           SKA14]
          Length = 404

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 106/374 (28%), Gaps = 68/374 (18%)

Query: 36  DFNSHVRRYKVGQENFIQSFLTEMQWMRQLT-GPRSISSIFFGGGTPSLIEPQNIALILD 94
            F +      V  + ++++ L  ++         R + ++    G    + P  +  +LD
Sbjct: 60  GFQAGRSGRDVPAQAYLETVLLALRLQAAALAEDREVVAMVLQLGLAETLPPPQLGQLLD 119

Query: 95  GIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNA 154
            + ++  + +     +E    +    +    R  G  R            L  + R    
Sbjct: 120 AVPQH--LRTVARPQVEVRLDAGSALSPAQLRAVGCTR------------LNVIDRADAP 165

Query: 155 SEAIAAIHL-----ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
              + A        AR    R+        P      +   L   L+ A + + L     
Sbjct: 166 GPTLLAQARQVGFTARYYQLRV--------PACEDAGFIERLHEVLAEAPERVLL----- 212

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN- 268
                           LP    A +       +  A G  A    ++      + H    
Sbjct: 213 -----------PAPCALPQHPSAANWLQ-AWRLLRAAGYEAIGGDHYQRGDLPNPHGPGD 260

Query: 269 YWRY-----------GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE 317
             R+            D+IG+G  A S++    +R    +E   + W   ++     V  
Sbjct: 261 GQRHCDLAGVPRRDRSDFIGLGLSACSQIGEVFYR----LEDEWDQWRARLQAGHIGVSA 316

Query: 318 KEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDI------ECERNLQRQGFIERV 371
              LS E++    +   +     +    +E       +            L  +G+  + 
Sbjct: 317 GLILSEEERLAAEVAQSIACDHALDAAAFEWRNDEPFEECFAGQLPALSPLLARGW-AQW 375

Query: 372 QFSRLRCTQRGMTM 385
               LR  + G  +
Sbjct: 376 DARVLRLAEEGRLL 389


>gi|50120258|ref|YP_049425.1| hypothetical protein ECA1319 [Pectobacterium atrosepticum SCRI1043]
 gi|81645754|sp|Q6D7K6|MIAB_ERWCT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|49610784|emb|CAG74229.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 474

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 69/231 (29%), Gaps = 18/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   YC F                  L E+  +    G R ++ +      + G   +
Sbjct: 157 CNK---YCTFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGE--T 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 I    + +     +     +     +P     +    Y      V+ + L VQS
Sbjct: 211 Y--DGEICSFAELLRLVAAIDGIDRVRFTTSHPIEFTDDIISVYEDTPELVSFLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  A I    N      +S D I   P +T   +E  ++     
Sbjct: 269 GSDRVLTMMKRRHTALEYKAIIRKLHNARPGILISSDFIIGFPGETQADFEQTMKLIADV 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             D    +  +   GT    M  D       + + +    +T+       L
Sbjct: 329 NFDMSYSFVYSARPGTPAADMVDDVLEEEKKQRLYLLQDRITKQAMRFSRL 379


>gi|21672691|ref|NP_660758.1| hypothetical protein BUsg426 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091587|sp|Q8K9C2|MIAB_BUCAP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|21623331|gb|AAM67969.1| hypothetical 53.7 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 439

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 73/226 (32%), Gaps = 14/226 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F                  L E+  + +  G R I     ++    G    
Sbjct: 156 CNK---YCSFCVVPYTRGHEISRPSDDILLEISILAE-NGVREINLLGQNVNAYRGRTFN 211

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +    + +L  +++   +      T  +NP     +  + Y+     V+ + L VQS  
Sbjct: 212 GKICFFSELLRLVSEIDGIDRIRFTT--SNPLEFTDDIIEVYQDTPKLVSFLHLPVQSGS 269

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++   E    I         +  S D I   P ++   ++  +        
Sbjct: 270 NRILQLMKRSYTTEEYEKIIEKLILARSNIQISSDFIVGFPSESEEDFQKTINFIKKINF 329

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           D    +  +   GT   +M  + DL    + +      + +   S 
Sbjct: 330 DMSFSFIYSSRPGTPASEMKDNIDLQEKKKRLYTLQNCINKQTMSW 375


>gi|328952579|ref|YP_004369913.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Desulfobacca acetoxidans DSM 11109]
 gi|328452903|gb|AEB08732.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Desulfobacca acetoxidans DSM 11109]
          Length = 440

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 6/141 (4%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P  +  +    + +     + I L VQ+     L  + R +   E +  ++  R I
Sbjct: 235 TTSHPRDLSDDLICCFAELPPLCDHIHLPVQAGSNHILARMHRGYTREEYLHKVNRLRQI 294

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +S   DLI   P +T   +   L      A D    ++ +    T    +     + 
Sbjct: 295 CPGISLTTDLIVGFPGETEADFADTLALMREVAFDAAFYFKYSPRPQTAAAALVD--QIP 352

Query: 226 LPSENVAVDLYNLTQSITSAH 246
            P +   +    + Q   S  
Sbjct: 353 EPVKAERLARLRILQEELSLA 373


>gi|323701826|ref|ZP_08113496.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323533130|gb|EGB22999.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 363

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++ +E  + +     +   +L     +            
Sbjct: 67  YCCNDCYYCGLRRSNKDIKRYRIPREEVLAA----AKHAAELGYGTIVLQSGEDLYY--- 119

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +A ++  I +    +  V +          + ++Q  R+AG +R  L  ++ + Q
Sbjct: 120 -SGAELAEMVAQIKRIGNFAVTVCV------GERSLADYQLMREAGADRYLLKHETADPQ 172

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L       E +  +   R +  ++    +  LP QTM     ++       V+   
Sbjct: 173 LFSQLRPGTTLQERLERLKWLRELGYQVGSGNMVGLPGQTMATLADDILLLKELDVEMAG 232

Query: 204 LYQLTIEKGTLFYKMHK 220
           +        T       
Sbjct: 233 IGPFIPHHQTPLRDCPP 249


>gi|302392777|ref|YP_003828597.1| radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302204854|gb|ADL13532.1| Radical SAM domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 377

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 15/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+K C YC     +R        +    +  L    W+ +      +             
Sbjct: 60  CIKNCNYCG----IRHDNNKVNRYTMNEEEILESANWVYENNYGSIVLQSGER------- 108

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +     ++ + K     SN E+ I  +        +Q +   G +R  L +++  E+ 
Sbjct: 109 NDEEYIEFVNKLVKKIKELSNGELGITLSLGEQTKETYQKWFDLGAHRYLLRIETSNEEL 168

Query: 145 LRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            + +  N H+       I   R I  ++   ++  LP QT      ++      ++D + 
Sbjct: 169 YKSIHPNDHDFQSRKECIAELREIGYQVGTGVMIGLPGQTREDLVDDILFFKDESIDMIG 228

Query: 204 LYQLTIEKGTLFYKMHKDG 222
           +    I + T   +   D 
Sbjct: 229 MGPYVIHEDTPLVQEVTDQ 247


>gi|291528925|emb|CBK94511.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium rectale
           M104/1]
          Length = 479

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ + +L        +  G        +L
Sbjct: 195 CNNFCSYC-----IVPYVRGRERS-REPKDIIREIEKLVADGVCEIMLLGQNVNSYGKTL 248

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  + K   +       + ++P  +  +     ++       + L +QS  
Sbjct: 249 DNPITFAELLREVNKIEGLKRIRF--MTSHPKDLSDDLIMAIKECDKVCKHMHLPLQSGS 306

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +  +   R   P ++   D+I   P +T   +   +        
Sbjct: 307 SRVLKEMNRHYDKEKYLDEVKRLREQIPDIAITTDIIVGFPGETEEDFLETMDVVKQVRY 366

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 367 DSAFTFIYSKRTGTRAATM 385


>gi|291524754|emb|CBK90341.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium rectale DSM
           17629]
          Length = 479

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ + +L        +  G        +L
Sbjct: 195 CNNFCSYC-----IVPYVRGRERS-REPKDIIREIEKLVADGVCEIMLLGQNVNSYGKTL 248

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P   A +L  + K   +       + ++P  +  +     ++       + L +QS  
Sbjct: 249 DNPITFAELLREVNKIEGLKRIRF--MTSHPKDLSDDLIMAIKECDKVCKHMHLPLQSGS 306

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++  + +  +   R   P ++   D+I   P +T   +   +        
Sbjct: 307 SRVLKEMNRHYDKEKYLDEVKRLREQIPDIAITTDIIVGFPGETEEDFLETMDVVKQVRY 366

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 367 DSAFTFIYSKRTGTRAATM 385


>gi|307724897|ref|YP_003904648.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|307581958|gb|ADN55357.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
          Length = 349

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  +Q          +      + +I    G    
Sbjct: 64  YCSNTCFYCGLRGPNRTIKRYRMEPEEILQCV--------KYGASVGLKTIVLQSGEDKY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 116 FKITTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 168

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 169 LYQKLHPGMSYENRVRCLMDLRELGYEVGTGSLVGLPGQTLEMLAQDLIFFKKIDADMLG 228

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 229 IGPFIPCENTPLER 242


>gi|19704477|ref|NP_604039.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714747|gb|AAL95338.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 304

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 83/251 (33%), Gaps = 21/251 (8%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  N          ++  Q    +++ + +          +F   
Sbjct: 31  CPNRDGKFSKGGCIFCSENGSGDFTSGKLKSIHQQIDEQVELVSKKYKGDK-YIAYFQNF 89

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
           T +  +   +  I +    +  +   V + I   P  +E +  +   +        I LG
Sbjct: 90  TNTYADINYLRKIYEEALSHKNI---VGLAIATRPDCLEDDILKLLDELNKKTFLWIELG 146

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ ++  ++  R +       A      +  +    +I  LPK+    +      + +
Sbjct: 147 LQTINDKVAKYFNRAYETKIYEEASQKLNKLNIKFVTHIIIGLPKEKKDDYLKTAIFSQN 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
                L L+ + + K T   K+++ G+L + ++           +I         EI  H
Sbjct: 207 CGTWGLKLHLMYVVKNTPLEKLYQSGNLKVHTKEE---YIEKIVNILENISP---EIVIH 260

Query: 257 SFLGAESLHNL 267
              G  +   L
Sbjct: 261 RMTGDGNRETL 271


>gi|241668686|ref|ZP_04756264.1| 2-alkenal reductase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254877218|ref|ZP_05249928.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843239|gb|EET21653.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 442

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 63/214 (29%), Gaps = 19/214 (8%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YV     C K C YC       R       F            Q     ++         
Sbjct: 152 YVSIMEGCDKYCSYC--VVPYTRGPEVNRPFEDVLGECAALAEQGVKEITLLGQNVNH-- 207

Query: 81  PSLIEP------QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
              + P       ++AL++  IA+   +      T  ++P     N    Y       N 
Sbjct: 208 --YLGPMENGETADLALLIHFIAEIDGIERIRFTT--SHPVEFSQNLIDAYGSVPELANH 263

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEME 190
           + L VQ   ++ L  + RNH   E    I    A      +S D I   P +T   ++  
Sbjct: 264 LHLPVQHGSDRVLINMKRNHTILEFKQKIRKLRAIRPDITISSDFIVGFPGETEEDFQKL 323

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +        D    +  +   GT    +  D  +
Sbjct: 324 MDLVKDVNFDQSFSFIYSKRPGTPAADLPDDTPI 357


>gi|309388706|gb|ADO76586.1| iron-only hydrogenase maturation protein HydE [Halanaerobium
           praevalens DSM 2228]
          Length = 348

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 18/192 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC     N  ++RY++ +E  +       Q   +L     +            
Sbjct: 65  YCKQNCYYCGLRKDNKEIKRYQLKKEEIV----KTAQMASELGYQTVVLQSGEDEY---- 116

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              Q IA I+  I     ++    IT+              +R+AG +R  L  +  +  
Sbjct: 117 -PAQTIAEIIREIKAKTKMA----ITLSLGERDFAAYKL--WREAGADRYLLKHEIADRS 169

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +      +    I ++   + I  ++   +I  LP QT      +L       +D + 
Sbjct: 170 LYQKYHPKMSYENRIESLEYLKLIGYQIGSGVIIGLPGQTPEILAEDLLLCQDLELDMIG 229

Query: 204 LYQLTIEKGTLF 215
                  + T  
Sbjct: 230 SGPFIPHQATPL 241


>gi|281358044|ref|ZP_06244528.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
 gi|281315417|gb|EFA99446.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
          Length = 451

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 80/248 (32%), Gaps = 28/248 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C +C    + R +  G    +       ++ +  L G           G P     
Sbjct: 170 CPQSCDFC----YTRNFFAGGRQFYTAPVERTLREIAALPGRHLFFLDDNLFGAPRF--A 223

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL- 145
           + +   ++G+ + +  ++ V           + +  +   +AG+  + +G +SL  +SL 
Sbjct: 224 RELFAGMEGMNRVFQGAATVRSLQ-------DDSLLEAAVRAGLRSLFIGFESLNPESLA 276

Query: 146 ---RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              + + R     E    +    +    ++   ++ L       ++  ++ AL   ++  
Sbjct: 277 ACNKAINRI---EEYALTVRRLHDHGIMVNASFVFGLEADRPEVFDRTVEWALETGIETA 333

Query: 203 SLYQLTIEKGTLFYKMHK------DGDLVLPSENVAVDLYNLT-QSITSAHGLHAYEISN 255
           + +  T   GT F++  +        D        AV  ++             +Y    
Sbjct: 334 TFHLATPYPGTPFFERMEKEGRLLHRDWERYDTRHAVIRHDHMSAEELEEGYWRSYRNFY 393

Query: 256 HSFLGAES 263
                  S
Sbjct: 394 RWRSIFRS 401


>gi|269123553|ref|YP_003306130.1| RNA modification enzyme, MiaB family [Streptobacillus moniliformis
           DSM 12112]
 gi|268314879|gb|ACZ01253.1| RNA modification enzyme, MiaB family [Streptobacillus moniliformis
           DSM 12112]
          Length = 438

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 69/195 (35%), Gaps = 18/195 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI---SSIFFGGGTPS 82
           C K+C +C     +  Y  G+E  +  +  L++++   +      +    ++   G    
Sbjct: 154 CDKRCSFC-----IVPYVRGKERSVPMEDILSDVRHYLKKGAKEIVLLGQNVNAYGKK-- 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                  A +LD I K       +      +P     +      +       I + +QS 
Sbjct: 207 FKNGDTFAKLLDEICKIEG--DYILRFTSPHPKDFTDDVIDVIARNEKIARCIHMPLQSG 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +   + +   +  +   P  S   D+I   P +T   ++  L       
Sbjct: 265 STKILKKMIRGYTKEQFLDLAYKIKERIPEASLTTDIIVGFPGETDEDFKDTLDVVEKVG 324

Query: 199 VDHLSLYQLTIEKGT 213
            ++  ++  +I +GT
Sbjct: 325 FENAYIFMYSIRRGT 339


>gi|257066511|ref|YP_003152767.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
           20548]
 gi|256798391|gb|ACV29046.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
           20548]
          Length = 449

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     V   +  +E+   S +  +  +  L           G    S     
Sbjct: 168 CDNFCSYC----IVPESRGREESRRPSAI--LAEVEHLVEEGYKEITLLGQNVNSYGNKA 221

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +       +L+ I++   +      T  ++P  +     +  +      N   L +QS  
Sbjct: 222 DFDMTFPELLEKISQIEGLKRLRFTT--SHPKDLSDELIEVIKNNDNICNYFHLPLQSGS 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++  + I      R       +S D+I   P +T   ++  L+       
Sbjct: 280 SKVLKDMNRKYDQEKYIERAKKLREEIPGIAISTDIIVGYPTETEEDFKETLKVCREIEF 339

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    ++ +    T   K+    D
Sbjct: 340 DSAFTFKYSPRPKTRAAKLTPIDD 363


>gi|121595917|ref|YP_987813.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acidovorax sp.
           JS42]
 gi|229890416|sp|A1WBW2|MIAB_ACISJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120607997|gb|ABM43737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax sp. JS42]
          Length = 448

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 11/224 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC       R +     F    +       Q     ++   +   + G      
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYLGAMGDTA 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  + AL+L+ +A+   +      T  ++P+       + Y K    V+ + L VQ   +
Sbjct: 213 EKADFALLLEYVAEIPGIERIRFTT--SHPNEFTPRLIEAYAKIPKLVSHLHLPVQHGSD 270

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R + A E  + I    A      MS D I   P +T   ++  ++       D
Sbjct: 271 RILMAMKRGYTAMEYKSTIRKLRAIRPDMAMSSDFIVGFPGETEEDFQKMMKLIDDVRFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +   +  +   GT    +H D    +    +      + ++I  
Sbjct: 331 NSFSFIFSPRPGTPAANLHDDTPHEVKLRRLQELQAVINRNILE 374


>gi|21674715|ref|NP_662780.1| BchE/P-methylase family protein [Chlorobium tepidum TLS]
 gi|21647924|gb|AAM73122.1| BchE/P-methylase family protein [Chlorobium tepidum TLS]
          Length = 500

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 77/204 (37%), Gaps = 8/204 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C  +C +C  N         +       + E++ +R+     S+  +   F     + ++
Sbjct: 175 CPYRCDFC--NVTALFGHKIRTKTSSQIIAELEELRRHGWQDSVFFVDDNFIAHR-AYLK 231

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +  +++   K    ++        N +  +    +    AG NR+ +G+++ E  +L
Sbjct: 232 KELLPALIEW-RKTKGATNEFYTECSINLAD-DAELMKLMVDAGFNRVFIGIETPEVTAL 289

Query: 146 RFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +  G+ H  + + +  I   +N    +    I      T + ++ +++      +    +
Sbjct: 290 QACGKQHNTSRDMLDNIRKIQNAGLEVQGGFIVGFDSDTPSIFQKQIEFIQKSGIVTAMV 349

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPS 228
             L    GT  Y+  K+   +LP 
Sbjct: 350 GILQALPGTKLYERLKNEGRLLPH 373


>gi|113478290|ref|YP_724351.1| radical SAM family protein [Trichodesmium erythraeum IMS101]
 gi|110169338|gb|ABG53878.1| Radical SAM [Trichodesmium erythraeum IMS101]
          Length = 476

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 85/251 (33%), Gaps = 15/251 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   +  ++   ++  ++   EM   + + G  S+   FF   T ++    
Sbjct: 207 CPAKCTFCLWPQTIGGHQYRAKSP-EAVGREMAEAKAIWGS-SVREYFFDDDTFTI---- 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +    +        +          N   ++ N  +  +K G+  + +G +S  ++ L  
Sbjct: 261 DKKRAIAISEHLQRLKLTWSCNARGN---LDYNTLKELKKNGLRLLLVGFESGNQKILDG 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A   +     +  ++    I  LP ++    E  ++ A       + +   
Sbjct: 318 VNKGIKLEVARKFMENCHKLGIKVHGAFILGLPNESQETIEETIRFACEVNPHTIQVSIA 377

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           +   GT  Y   +          VA     +  S      L   EI +    G E ++  
Sbjct: 378 SPYPGTELYTQAEKNGWFTGDSLVASSGIQM--SALQYPHLSGSEIED----GVEQMYRR 431

Query: 268 NYWRYGDYIGI 278
            Y+R    I I
Sbjct: 432 FYFRPKSIIPI 442


>gi|332879166|ref|ZP_08446867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332682966|gb|EGJ55862.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 482

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 4/134 (2%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  +         K       I L VQS   + L+ + R H   E  A I   R   P
Sbjct: 273 SNPQDMTFEVIDTMAKHHNICKYIHLPVQSGSNRILKAMNRMHTREEYFALIDGIRQRIP 332

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +S D+I   P +T       L        D   ++  +   GTL  +   D      
Sbjct: 333 DCAISQDMITGFPTETEEDHRDTLSLMEYVKYDFGFMFAYSERPGTLAARKIVDDVPEEV 392

Query: 228 SENVAVDLYNLTQS 241
            +    ++ +L Q+
Sbjct: 393 KKRRLTEIIDLQQA 406


>gi|261260656|gb|ACX55014.1| YmcB [Bacillus amyloliquefaciens]
          Length = 208

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 9/168 (5%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
           +  ++D + K   +         ++P   + +  +   K G  ++ I L VQS     L+
Sbjct: 4   LGDLMDELRK---IDIPRIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSAMLK 60

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R ++    +  +   +   P  S   D+I   P +T  Q+E  L        D    
Sbjct: 61  MMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYT 120

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  +  +GT   KM  +  + +  E +     +L + I SA  +  YE
Sbjct: 121 FIYSPREGTPAAKMKDNVPMRVKKERLQRLN-DLVKEI-SAKKMKEYE 166


>gi|255764472|ref|YP_003064841.2| 2-methylthioadenine synthetase (miaB-like) protein [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254547823|gb|ACT56901.2| 2-methylthioadenine synthetase (miaB-like) protein [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 469

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C K C +C     V  Y  G E   +S    +   R+L           G    +     
Sbjct: 186 CDKFCTFC-----VVPYTRGIEIS-RSLSQVVDEARKLIDNGVCEITLLGQNVNAWRGKG 239

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
           ++ +      D +     +   V +     +P  +     + +    V    + L VQS 
Sbjct: 240 LDGEK-CTFSDLLYSLSEIKGLVRLRYTTSHPRDMSDCLIKAHGDLDVLMPYLHLPVQSG 298

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A E    I   R++ P ++   D I   P +T   +   +       
Sbjct: 299 SDRILKSMNRRHTAYEYRQIIDRIRSVRPDIAISSDFIVGFPGETDDDFRATMDLVDKIG 358

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
                 ++ +   GT    M +  D
Sbjct: 359 YAQAFSFKYSPRLGTPGSNMLEQVD 383


>gi|153812372|ref|ZP_01965040.1| hypothetical protein RUMOBE_02771 [Ruminococcus obeum ATCC 29174]
 gi|149831534|gb|EDM86621.1| hypothetical protein RUMOBE_02771 [Ruminococcus obeum ATCC 29174]
          Length = 348

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     + +  +    ++  RQ        +    GG       
Sbjct: 61  YCKNDCYYCG----IRRSNQNAQRYRLTEEDILECCRQ-GYEIGFRTFVLQGGEDGFFTD 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             I  I+  I + +      +  +  +       +++ YR+AG +R  L  ++ + +   
Sbjct: 116 DRIVQIVRKIKEQYP-----DCALTLSIGEKSEESYRAYREAGADRYLLRHETADPRHYM 170

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +     + + + + +  +     +   P QT+     +         + + + 
Sbjct: 171 RLHPLEMSGENRKSCLRILKKLGYQTGAGFMVGSPLQTVDDLVEDFLFLKELDPEMVGIG 230

Query: 206 QLTIEKGTLFYKMH 219
                + T F    
Sbjct: 231 PFIAHQDTPFCNER 244


>gi|325660998|ref|ZP_08149625.1| hypothetical protein HMPREF0490_00357 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472505|gb|EGC75716.1| hypothetical protein HMPREF0490_00357 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 321

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 81/224 (36%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C    H++  ++     I     E+Q ++ L G      +F G G    ++ + +  
Sbjct: 65  CKFCTLFKHLQYRELP----IAQIEEELQRVKGLNGRP--RRVFLGDGNAFGMKTERLLK 118

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IL  + +        E+ ++A  ++++       +   +AGV  + LG++S     L ++
Sbjct: 119 ILKLVREY--FLDVAEVNMDATVTNIQEKSDVELKKLWEAGVRHLYLGIESGLPDVLEWM 176

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDHLSLYQ 206
            ++H   EA  AI   +         ++  +  +       E   +        H+  + 
Sbjct: 177 HKDHTLEEAYTAIDRIKRAGMIYDAHIMTGVAGRGRGTENAEKTAEFLNVTRPRHVINFS 236

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + + +    Y+  + G+ +   E   +             GL  
Sbjct: 237 MFLHQEAPLYRDIEQGNFLPADELENLLEEKCLLEHLQVDGLKY 280


>gi|315424979|dbj|BAJ46654.1| tRNA modifying enzyme [Candidatus Caldiarchaeum subterraneum]
          Length = 432

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 89/235 (37%), Gaps = 24/235 (10%)

Query: 28  CV-KKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   +C +C     V R + G E++ +++ + E++      G R +       G+  L  
Sbjct: 149 CRWSRCSFC----IVPRSRPGYESYPVRAVVDEVRKAVN-EGCREVWLTSQDMGSYGLES 203

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG-----VNRISLGVQS 139
            +N+  + + I    ++       I   NP  ++    Q   KA         I + VQS
Sbjct: 204 GRNL--LPELIESVNSLEGKFYTRIGMMNPIYLKP-ILQKLVKAYSGEKIYKFIHVPVQS 260

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R H+       +   R  FP +  S DLI   P +T   +E  L+     
Sbjct: 261 GSDKVLKDMNRGHSVQLFYHVVEAFRRRFPSITVSTDLIVGYPTETDEDFEQTLKLVEKT 320

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +++ +     GT       +G   LP   VA  +  L   + S   L + E
Sbjct: 321 RPAVVNVSRYFPRPGT-----PGEGLKTLPHHVVARRVSEL-NDLLSKIQLESNE 369


>gi|330686099|gb|EGG97720.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU121]
          Length = 448

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 98/307 (31%), Gaps = 31/307 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATTLVNAGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLDQVDGLERIRISSIEAS--QLTDEVIDVLERSNKIVRHLHVPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        I       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMEHFSERITKLHEALPDVAITSDVIVGFPGETEEEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           ++  +   GT   +M    D  + +     +      L +   S       E+       
Sbjct: 328 VFPYSSRIGTPAARMDDQIDEEIKNERVHKLIALSDQLAKEYASKFEDEVLEVIPEEKGE 387

Query: 261 AESL---HNLNYWRY-----GDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
             +    +  NY +       D IG              +V I    +P ++ K +R   
Sbjct: 388 KPNTLVGYADNYMKVEFEGSEDLIG-----------QIIKVKIQKADYPLNYGKAIRIVE 436

Query: 313 HAVVEKE 319
           HA  + E
Sbjct: 437 HATNKSE 443


>gi|255994069|ref|ZP_05427204.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
           49989]
 gi|255993737|gb|EEU03826.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
           49989]
          Length = 440

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 71/234 (30%), Gaps = 19/234 (8%)

Query: 22  YVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           +V+  F C   C YC     +  Y  G+E   +S    +          +    F G   
Sbjct: 156 FVNITFGCNNFCTYC-----IVPYTRGREKS-RSLDKILGETADAVSLGAKEVTFLGQNV 209

Query: 81  PSLI--EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAGVNRISLGV 137
            S      +N   +L   +K   +       + ++P  +             +  I L V
Sbjct: 210 NSYRGENGENFRDVLVEASKIQGLERIRF--MTSHPKDLTDELIDVMSLDKIMPHIHLPV 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS   + L+ + R+++    +  I    ++   ++   D+I   P +T   +   L    
Sbjct: 268 QSGSSEILKRMNRHYDRERYLEIIDKIYSLNEDIAITTDIIVGFPTETEEDFSKTLDLVR 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
               D    +  +  + T         D V          +++   +       
Sbjct: 328 RARFDAAFTFMYSKRRNTKAANFDGQVDRVEMGRR-----FDMLSELLKDISFE 376


>gi|302346286|ref|YP_003814584.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845]
 gi|302150387|gb|ADK96648.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845]
          Length = 449

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   IQS + + +   +  G + I       G       +
Sbjct: 167 CNYFCTYC---TIPFARGFSRNPTIQSLVAQAEEAAR-EGGKEIVLTGVNIGDFGKTTGE 222

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
           +   ++  + K   +      ++E  P  ++        +  A +    L +QS  ++ L
Sbjct: 223 SFLDLVKALDKVEGIQRFRISSLE--PDLIDDELIAYCAESRAFMPHFHLPLQSGSDEVL 280

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R ++ +     I L +   P   +  D++     +    +E       S  V  L 
Sbjct: 281 ELMHRRYDTALFARKIKLIKEKMPDAFIGVDVMVGSRGERPEYFEDCYNFLDSLPVTQLH 340

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 341 VFPYSERPGT 350


>gi|237738331|ref|ZP_04568812.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420211|gb|EEO35258.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 445

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 72/203 (35%), Gaps = 18/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C + C YC     + + +    +  +S    ++  ++L     +  I       +     
Sbjct: 155 CNRACTYC----IIPQMRGRLRS--RSIEDIVEEAKRLVAS-GVREINLLAQETTEYGID 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           L   + +A ++  + K   +       +  +P  V     +  +  +       + +Q +
Sbjct: 208 LYGDKKLAALMKELCKIEGLKWLRTYYM--HPEYVTDELIEVMKSEEKICKYFDVPIQHV 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  LR + R  +  +    ++  R   P  +    LI   P +T   ++  +     + 
Sbjct: 266 SDNILRNMARAKSGEQVKDVLNRIRKAIPEATIRTTLIVGFPGETEENFQELMDYVREFE 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
            D+  +++ + E+ T+ Y +   
Sbjct: 326 FDYAGVFKYSREEDTVAYNLPNQ 348


>gi|73540220|ref|YP_294740.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ralstonia eutropha
           JMP134]
 gi|123746634|sp|Q475N7|MIAB_RALEJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|72117633|gb|AAZ59896.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ralstonia eutropha
           JMP134]
          Length = 450

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC       R +     F            Q  G R ++ +      + G    
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQ--GVREVTLLGQNVNAYRGAMGG 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+++ +A+   +      T  ++P        + Y +    VN + L VQ  
Sbjct: 212 TSEIADFALLIEYVAEIPGIERIRYTT--SHPKEFTSRLVELYGRCDKLVNHLHLPVQHA 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R ++  E  + I   R + P MS   D I   P +T   ++  +       
Sbjct: 270 SDRVLMAMKRGYSVLEYKSIIRRLRMLRPDMSMSSDFIVGFPGETDADFDKLMALIEEVG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    +H
Sbjct: 330 YDTSFSFIFSPRPGTPAANLH 350


>gi|146279012|ref|YP_001169171.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557253|gb|ABP71866.1| MiaB-like tRNA modifying enzyme [Rhodobacter sphaeroides ATCC
           17025]
          Length = 425

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 88/238 (36%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G    + + +  ++ +R+L   R  + +   G   +     
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIRRLV-DRGFAEVVLTGVDLTSWGAD 198

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN------RISLGVQS 139
                 + D + +   +  ++     ++  S+E +  +    A          + L +Q 
Sbjct: 199 LPAQPRLGDLVMRILRLVPDLARLRISSIDSIEAD--EALMGAIATEPRLMPHLHLSLQH 256

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H   +AI     AR + P + F  D+I   P ++   +E  L+     
Sbjct: 257 GDDLILKRMKRRHLRDDAIRFCEEARRLRPDIVFGADIIAGFPTESEQAFENSLKLVGEC 316

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  L ++  +   GT   +M +    ++     A  L  L  +   AH      +S+
Sbjct: 317 GLTFLHVFPFSPRTGTPAARMPQLAGPLI--RERAARLRVLGDARLLAHLEAQRGLSH 372


>gi|325971811|ref|YP_004248002.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy]
 gi|324027049|gb|ADY13808.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy]
          Length = 437

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    H+ R K       Q     +              I   G   ++ + Q
Sbjct: 154 CDNSCAYC--RVHIARGKAVSLQTEQVIERALALEAS-----GFQEIMLTGVNLTMYDHQ 206

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSL 145
              L          +SS+V I +    P  ++           +     + VQS  +  L
Sbjct: 207 GEGLGGLLEKLLAKLSSSVRIRLSSMEPDHIDDRLLDVLTDRRMQPHFHIPVQSGSDHIL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++  SE    +   R       ++ D+I  LP +    +    Q  +      L 
Sbjct: 267 KHVDRHYTISELSVILDRLRKAKNDPFLAADIITGLPGEREEDFAATRQFVIDQQFSFLH 326

Query: 204 LYQLTIEKGTLFYK 217
           ++  +    T+ YK
Sbjct: 327 VFPFSPRPDTVLYK 340


>gi|304315403|ref|YP_003850550.1| BioB-related protein [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588862|gb|ADL59237.1| BioB-related protein [Methanothermobacter marburgensis str.
           Marburg]
          Length = 333

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 22/204 (10%)

Query: 27  FCVK-KCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C +  C +C  ++   R +   +    + + L E +  R+L       S  +G      
Sbjct: 42  WCERGDCAFCYMSTQKPRIREPSKARRNVNAILAEAEICRRLGWNIEFLSGGYG-----S 96

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P+ I  I + I             I  +P  +           G  V  I+  ++   
Sbjct: 97  FSPEEIKEIAERIR-----------DITGSPVWLNTGITTDLEIYGDEVAGITGALEVAN 145

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
               R L  +    +    +  AR++  R    +I  L  +T        +      +D 
Sbjct: 146 PDLQRKLCPSKPLEDIAEMLEAARDLGFRRGITIILGL-GETPDDLRYLFEFIGDLEIDR 204

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLV 225
           ++ Y L   +GT+F    +   L 
Sbjct: 205 VTFYALNPHEGTVFENQPQPATLY 228


>gi|302872168|ref|YP_003840804.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575027|gb|ADL42818.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 441

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 78/244 (31%), Gaps = 28/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC          + +  +    + ++    +    R    I       +     
Sbjct: 156 CNNRCSYCS-------IPLIRGKYTSRPIEDIVREAKELAERGYKEIILTAQDTTKYGTD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +   + +  +L+ + K   +     +   + P  ++ N     + +   VN   + VQ +
Sbjct: 209 IYGKKMLPALLEELEKIEKIKWIRFLY--SYPEDLDENFVNVVKFSSKVVNYFDIPVQHV 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKSTKESIRRLIEKIRESFDEVVIRTTILVGFPTETDEEFEELCSFLKWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L  +  + E+GTL  ++ +  +      ++    Y    +I            N   
Sbjct: 327 FDRLGAFMYSQEEGTLASQLPQVDE------DIKQRRYEKVLNIQRKISKKQ----NRKR 376

Query: 259 LGAE 262
           +G E
Sbjct: 377 IGKE 380


>gi|301060145|ref|ZP_07201012.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300445657|gb|EFK09555.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 295

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 89/243 (36%), Gaps = 14/243 (5%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C   ++  +    +++  ++ L+++ +  +    +    +  G     +I  
Sbjct: 29  CSHNKCTFCG--TYTDKRFTIKDD--KTILSDILFASKYMKRQDRIFLMDGDAL--IIPQ 82

Query: 87  QNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  ILD I ++      V     A           +  R+ G++ + +GV++ ++  L
Sbjct: 83  KRLMWILDRIREHLPWIKRVGAYANAKGIKMKSAEELKALRENGLSILYMGVETGDDDLL 142

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT----QWEMELQRALSYAVDH 201
           + + +   A + I      R    ++S  +I  +                +   +   ++
Sbjct: 143 KKIRKGSTAQKLIDMGRKVREAGIKLSVTVILGIAGNDPELSRRHTRATGEVLSAMDPNY 202

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD--LYNLTQSITSAHGLHAYEISNHSFL 259
           +    + +  GT  Y  +K G+  L +E   +      +  +  S     +   SN+  +
Sbjct: 203 VGALTVMLIPGTPLYDEYKRGEFRLLNERETLVELREMIAHTNLSRGMFFSNHASNYLPI 262

Query: 260 GAE 262
            A 
Sbjct: 263 KAR 265


>gi|299137313|ref|ZP_07030495.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298600718|gb|EFI56874.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 485

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 39/257 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM---------RQLTGPRSISSIFFGG 78
           C + C +C  ++  +  K      +   L E+  +           L G R  S   F G
Sbjct: 179 CPQHCDFCYKDAFFQGGKGFYTQRVDDALAEIARLPGRHLYFLDDHLLGDRRFSEALFEG 238

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
                         + G+ + +  ++ V+  +  N         +   +AG+  + +G +
Sbjct: 239 --------------MKGMRRLFQGAATVDSILRGN-------LIEHAAEAGLRSLFVGFE 277

Query: 139 SLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +L   +LR   +  N      A+     ++   ++   ++ +       +   +  A+  
Sbjct: 278 TLTPDNLRRSNKRQNLGRDYKAVADRLHSLGIMINGSFVFGMDDDGEDVFRRTVDWAVER 337

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS----ENVAVDLYNLTQ---SITSAHGLHA 250
            +   + +  T   GT  +   +    +L       +    +Y  T+            A
Sbjct: 338 GITTATFHIQTPYPGTQLHARMEREGRMLTRDWNLYDTRHVVYQPTRLRPEALKDGYDWA 397

Query: 251 Y-EISNHSFLGAESLHN 266
           Y E      +G  +LH+
Sbjct: 398 YREFYRWESIGRAALHH 414


>gi|261405595|ref|YP_003241836.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10]
 gi|261282058|gb|ACX64029.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10]
          Length = 447

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 68/200 (34%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + +   +        + +    GG    +E  
Sbjct: 153 CNNFCTFC---IIPWSRGLSRSRDPKSIIKQAHQLVGAGYKEIVLTGIHTGGYGDDLEDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            ++ +L  + +   +      +IEA+   ++        ++      + + +Q+ ++  L
Sbjct: 210 RLSDLLWDLDRVDGLERIRISSIEAS--QIDEKMLDVLNRSSKMCRHLHIPLQAGDDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    + L R   P +    D+I   P +T   +        +     + 
Sbjct: 268 KRMRRKYTTEEFYNKMGLIRQAMPDVGITTDVIVGFPGETDEMFRNGYDLMKAIQFSEMH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSKRTGTPAARMEDQVD 347


>gi|94266362|ref|ZP_01290062.1| MiaB-like tRNA modifying enzyme [delta proteobacterium MLMS-1]
 gi|93453045|gb|EAT03530.1| MiaB-like tRNA modifying enzyme [delta proteobacterium MLMS-1]
          Length = 470

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 65/199 (32%), Gaps = 10/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC     V R +    + + +  L + +         ++ +    G     + P
Sbjct: 161 CSQACSYC----IVPRARGRSRSVLPERVLRQAEIFAAAGHREAVLTGIHLGHYGRDLTP 216

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               L L        +            + +  +           +  + + +QS +++ 
Sbjct: 217 PGSLLGLLEQLLARDL-PLRYRLSSLEATEIGPDLLALLAAESRLLPHLHIPLQSGDDRI 275

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R ++ +   A I       P   +  D++   P +    ++   +   +  + +L
Sbjct: 276 LRAMNRPYDRARFAAVIERCAAALPEAAIGIDVMTGFPGEDEPAFQHTYELLAALPISYL 335

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            ++  +   GT   ++   
Sbjct: 336 HVFPYSQRAGTPAARLPDQ 354


>gi|310828135|ref|YP_003960492.1| hypothetical protein ELI_2547 [Eubacterium limosum KIST612]
 gi|308739869|gb|ADO37529.1| hypothetical protein ELI_2547 [Eubacterium limosum KIST612]
          Length = 294

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 84/237 (35%), Gaps = 16/237 (6%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CD    + + K      ++  + +++  R+  GP  ++ IF   G   +   
Sbjct: 25  CSHNKCRFCD----MYKEKSFHVPPLEDVIGDLKQAREAYGP--VNRIFLADGDALVRRF 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL  I +         +T   +P S+        +  R  G+  I +G++S  + 
Sbjct: 79  SDLEAILGAIQEI--FPECGRVTSYGSPRSILIKTPEQLRRLRALGLKMIYMGLESGSDA 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            L  + +   A+E I A  + R    ++S   I  L  +           +   +   ++
Sbjct: 137 ILSHVNKGETAAEIIKAGRMVREAGMKLSVTAISGLGGKARWQEHAVKTAEALNAMNPEY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA--HGLHAYEISNH 256
           + L    +E         + GD  + +         L      +      +  ISN+
Sbjct: 197 IGLLTFRLEGQAPMIPEVERGDFQMLTPIEVARETLLMMEHLDSPGSVFRSNHISNY 253


>gi|158425345|ref|YP_001526637.1| elongator protein [Azorhizobium caulinodans ORS 571]
 gi|158332234|dbj|BAF89719.1| elongator protein [Azorhizobium caulinodans ORS 571]
          Length = 647

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 108/326 (33%), Gaps = 30/326 (9%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + ++  +   +   Q      I+   F        + 
Sbjct: 270 CPYQCSFCTIINVQGRQSRFRSADDVEDLVR--RNWAQGISKFFITDDNFARNR----DW 323

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  + +   +   + I ++    ++  N  +  ++AGV R+ +G++++   +L 
Sbjct: 324 EAIFDRLIALKEQERIPLGLMIQVDTLCHNI-PNFIEKAKRAGVTRVFIGLENINPDNLA 382

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRA-LSYAVDHLSL 204
              +  N       + LA      ++    I   P  T      ++        +D +  
Sbjct: 383 EAKKRQNKITEYRKMLLAWKAQGIITIAGYILGFPADTPESIRRDIGIIQRELPLDIVEF 442

Query: 205 YQLTIEKGT----LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           + LT   G+      ++     D  L   +V         +  S     A      + L 
Sbjct: 443 FCLTPLPGSEDHQKLWRAKVPMDGDLNIYDVEHVC--TAHAAMSKTEWEAIYQEAWA-LY 499

Query: 261 AESLHNLNYWRYGDYIGIGPGAHSRVK-VGSHRVAISIEK-HPESWLKMVRKNGHAVVEK 318
               H     R    +  G    S VK + +   A+ IEK HP      + +  H    +
Sbjct: 500 YSPAHMRTLMRRA--VATGVSVSSLVKLLVTFSTAVPIEKVHPLQ--AGILRLRHPAERR 555

Query: 319 EFLSSEQQA---DEFLMMGLRLREGI 341
             LS E        FL   LR    +
Sbjct: 556 PDLSREPALAFWLRFLWQTLRRNAAV 581


>gi|149914119|ref|ZP_01902650.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
 gi|149811638|gb|EDM71471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
          Length = 446

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 24/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C K C +C     V  Y  G E    +    +   R+L   G R I+ +      + G  
Sbjct: 160 CDKFCAFC-----VVPYTRGAEASRPA-ARILDEARELVDRGVREITLLGQNVNAYHGTG 213

Query: 81  P--SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           P  S      +   LD I     +         ++P+ +  +  + +      +  + L 
Sbjct: 214 PDGSDWSLARLIWALDAIDGLERIR-----FTTSHPNDMADDLIEAHASCAKLMPYLHLP 268

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L+ + R H A   +  I   R   P +  S D I   P++T   ++  +   
Sbjct: 269 VQSGSDRILKRMNRKHTAESYLRLIERIRAARPDILMSGDFIVGFPEETEADFQATMDLI 328

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                 +   ++ +   GT   + 
Sbjct: 329 EEVKYGYAYSFKYSTRPGTPAAER 352


>gi|84489190|ref|YP_447422.1| 2-methylthioadenine synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372509|gb|ABC56779.1| predicted 2-methylthioadenine synthetase [Methanosphaera stadtmanae
           DSM 3091]
          Length = 424

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 74/244 (30%), Gaps = 22/244 (9%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           VH       C  +C +C      R +       I   +  +    +         +    
Sbjct: 138 VHILQICEGCNGQCTFC-CTRIARGF------LISYPIDVIVEEAKDAVEHGCKELQVTA 190

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAG--VNR 132
              +           D + K   +  +  I +   NP S++         ++      N 
Sbjct: 191 QDTACFGMDTGESFADLLNKLGAIEGDFRIRVGMMNPQSIKNQLHEVIDAFKNNDKIFNF 250

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +QS   + L+ + R H   E    ++  R   P+MS   D+I   P +T   +   
Sbjct: 251 VHLPIQSGSPKVLKEMNRKHTLDEYKYILNEFRKEIPQMSLATDIIVGYPTETEEDFNQT 310

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L+       D + + +     G       K+ D  +            T+ +   +    
Sbjct: 311 LELLKEIKPDIVHISKYMHRPGAK-SNHLKEIDHNIMKNRSHRVNQVKTEVMLEKN--KE 367

Query: 251 YEIS 254
           YE +
Sbjct: 368 YENT 371


>gi|313905113|ref|ZP_07838482.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
 gi|313470016|gb|EFR65349.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
          Length = 378

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +RR       +  +    +   R        + +   G  P     +
Sbjct: 88  CASNCLYCG----IRRDNKKAVRYRLTEEEILDCCRAGYAFGFRTFVLQSGEDP-WWSDE 142

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  I K ++     +  I  +       +++ Y +AG +R  L  ++   +  R 
Sbjct: 143 KVCALIRRIRKEYS-----DCAITLSIGEKTKESYRKYFEAGADRYLLRHETASPKLYRK 197

Query: 148 LG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L          I  +   ++I  ++   ++   P QT+     +L        D + +  
Sbjct: 198 LHPLEQTLENRIRCLCDLKDIGYQIGAGMMLEAPGQTVEDLVEDLFFLKKLQPDMIGIGP 257

Query: 207 LTIEKGTLF 215
                 T  
Sbjct: 258 FIPHSDTPL 266


>gi|260574290|ref|ZP_05842295.1| MiaB-like tRNA modifying enzyme [Rhodobacter sp. SW2]
 gi|259023756|gb|EEW27047.1| MiaB-like tRNA modifying enzyme [Rhodobacter sp. SW2]
          Length = 416

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 23/234 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGG--- 78
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G    
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGVVVEQIKRLVDKGFQEVVLTGVDLTSWGADLP 200

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
           GTP+L     +  IL  +     +  +   +IE + + ++     G ++  +  + L +Q
Sbjct: 201 GTPAL--GDLVLRILRLVPDLPRLRISSIDSIEVDGALMDA--IAGEQRL-MPHLHLSLQ 255

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           + ++  L+ + R H   +AI   + AR + P      D+I   P +T   ++  L     
Sbjct: 256 AGDDLILKRMKRRHLRDDAIRFCNEARRLRPDMVFGADIIAGFPTETEAMFQRSLDLVAD 315

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  L ++  +  KGT   +M          +  A  L     +    H +  
Sbjct: 316 CGLTFLHVFPFSARKGTPAARMPLVRGPE--VKERAARLRAAGDAALQGHLMAQ 367


>gi|94969363|ref|YP_591411.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551413|gb|ABF41337.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 553

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 3/167 (1%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C + C +C   +  R          +     ++ M+ +   R IS   F      L  P 
Sbjct: 206 CARTCSFCSIQTFYRTAPGKIVR-TRKPAKVIEEMQAMHEERGISIFLFQDDDFPLFGPV 264

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +  A           ++  V   I     +VE   F   R AG+  + +G++S  E+ L
Sbjct: 265 WRRWAYDFVDCMHRSGLAQRVIWKINCRADAVEPEIFTAMRDAGLYLVYMGLESGNEEGL 324

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + L +  +  + I A+ + + +     F  +   P  T+   +  L+
Sbjct: 325 KTLHKQVSVEQNIRAVEMLKQVGLLFEFGFMMFDPGSTLESIKQNLR 371


>gi|150014931|ref|YP_001307185.1| radical SAM protein [Clostridium beijerinckii NCIMB 8052]
 gi|149901396|gb|ABR32229.1| conserved hypothetical radical SAM protein [Clostridium
           beijerinckii NCIMB 8052]
          Length = 309

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C        Y   +E  I     +++ M            +F   T +      +  
Sbjct: 48  CLFCS-ERGSGDYAGDRELSISKQFHDIKDMMSQKWKSGKYIAYFQAYTNTYAPIDELKR 106

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             +       V   V I I   P  ++ +  +            I LG+Q+  + + + +
Sbjct: 107 KYEEALNQEGV---VAIAIATRPDCLDDDVLELLDNINNKIYLWIELGLQTSNDDTAKRI 163

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +       A+         +    I  LP +T       +          + L+ L 
Sbjct: 164 NRGYKLDVFENAMRKLEERNIDVVVHDILGLPGETKEDMLETINYIAHSGAKGIKLHLLH 223

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           + K T   K+++ GDL   S++  +DL     ++     +  
Sbjct: 224 LMKQTPMVKLYEAGDLKFLSQDDYIDLVTHGITLLPKDMVVH 265


>gi|289423873|ref|ZP_06425666.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289155650|gb|EFD04322.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 449

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 70/215 (32%), Gaps = 13/215 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     + + +     +    L ++    +    R +  +       S+    
Sbjct: 154 CDNNCTYC----IIPKLRGK---YRSRKLEDLLAEAEGLLERGVKELVVIAQDTSVYGRD 206

Query: 88  NIALIL--DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
               ++  + + +   +       + + P  +         K     +   + +Q   ++
Sbjct: 207 RYGRVMLAELLERLAKMGFKWIRVMYSYPEGITEEIVDVIAKYDNLCSYFDIPMQHASDR 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R+ +  E  + + + R+  P  +     I   P +T   ++  +    +  +D 
Sbjct: 267 ILKLMNRHTSNQELRSKVEMIRSKIPDATIRTTFIVGFPGETDEDFDTLIDFVENMGLDR 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           +  +  + E+ T   ++    D     E +   + 
Sbjct: 327 MGAFTYSREEDTPADRLPDHIDEDTKKERLERLMM 361


>gi|302876110|ref|YP_003844743.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307686836|ref|ZP_07629282.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302578967|gb|ADL52979.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 449

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 86/232 (37%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C  +S  +  K      +   L E++ M+     + +  +         +  +
Sbjct: 170 CPNKCSFCYVSSFYKGGKSFFAYKVDRVLEEIESMK----GKHLYFLDDNIFANKKLS-R 224

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   + G+ K +  +  V+  ++        +  +   +AG     +G +S+ +Q+L  
Sbjct: 225 QIFKEMRGMNKYFQGAITVDSILQ-------DDTIELAYEAGFRSAFIGFESINKQNLIQ 277

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             +  N   + IAAI     +   ++   I+ L    +  ++   + A+S  +   + + 
Sbjct: 278 ANKGSNIGKDYIAAIKRLDRLGIMINGSFIFGLDDDNLDVFDRTTEWAVSSGITTATNHI 337

Query: 207 LTIEKGTLFY------KMHKDGDLVLPSENVAVDLY-NLTQSITSAHGLHAY 251
           LT   GT  Y      K     D  L      V  + N+T+    +    AY
Sbjct: 338 LTPYPGTSIYDKMDTDKRIITKDWRLYDTRHLVFSHPNMTKEEMESGYNRAY 389


>gi|213025008|ref|ZP_03339455.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 119

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQ 372
           +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  +  
Sbjct: 27  INHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFTSDALRDFPDLERFIRQGYCYQ-N 85

Query: 373 FSRLRCTQRGMTMLDSV 389
            SRLR T+ GM + D +
Sbjct: 86  GSRLRLTETGMALSDCL 102


>gi|121533678|ref|ZP_01665505.1| RNA modification enzyme, MiaB family [Thermosinus carboxydivorans
           Nor1]
 gi|121307669|gb|EAX48584.1| RNA modification enzyme, MiaB family [Thermosinus carboxydivorans
           Nor1]
          Length = 451

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 64/205 (31%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +     +  +RQL           G    S  +  
Sbjct: 169 CNNFCTYC-----IVPYVRGRERS-RPLADILAEVRQLGTEGFKEITLLGQNVNSYGKDG 222

Query: 88  ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               + A +L  + K  T++      + ++P  +        +          L VQS  
Sbjct: 223 EETIDFADLLAAVDKVETIARIRY--MTSHPRDMNAKVIAVIKHGQRICEHFHLPVQSGS 280

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R +        +   R+  P  S   D+I   P +T   +   L    S   
Sbjct: 281 DIVLQRMNRGYTTEYYRKLVEKIRSEIPHASITTDIIVGFPGETDELFMQTLDFVRSIRF 340

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D    +  +   GT    M     L
Sbjct: 341 DAAYTFLYSPRSGTPAATMPDQVPL 365


>gi|154249967|ref|YP_001410792.1| MiaB-like tRNA modifying enzyme YliG [Fervidobacterium nodosum
           Rt17-B1]
 gi|238065356|sp|A7HMK2|RIMO_FERNB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|154153903|gb|ABS61135.1| MiaB-like tRNA modifying enzyme YliG [Fervidobacterium nodosum
           Rt17-B1]
          Length = 431

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 35/238 (14%)

Query: 28  CVKKCPYCDFNSH----VRRYKVGQENFIQSFL----TEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C         V R     E  ++  +     E+  + Q T    +        
Sbjct: 150 CDRACTFCTIPKFKGGFVSRKLEDIEKEVRYLIENGKKEIVLVAQDTTGYGVDLYGKQ-- 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAGVNRISLGVQ 138
               + P+ +  I D     W         +  +P  V     +G+  +  V    + +Q
Sbjct: 208 ----MLPELLKRINDIDGNFWIR------VMYMHPDHVTDEILKGFSYEKVVKYFDIPIQ 257

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ +GR  +  E        R+++P+      +I   P +T   +E  +    +
Sbjct: 258 HSSDNILKLMGRTKSTKELEELFDKIRSLYPQAVLRTSIIVGFPGETKDDFEQLIDFIRT 317

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              D L  +  + E+    Y +     L               Q           EIS
Sbjct: 318 IEFDRLGGFVYSDEEDAASYNLPNKVSL------------KTAQKRLDTLMEVQAEIS 363


>gi|15669816|ref|NP_248630.1| hypothetical protein MJ_1620 [Methanocaldococcus jannaschii DSM
           2661]
 gi|38258711|sp|Q59015|Y1620_METJA RecName: Full=Uncharacterized protein MJ1620
 gi|1500519|gb|AAB99641.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 505

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 59/198 (29%), Gaps = 15/198 (7%)

Query: 32  CPYCDFNSHVR----RYKVGQENFIQSFLT----EMQWMRQLTGPRSISSIFFGGGTPSL 83
           C +C   S       R +      +++ L      +                     P  
Sbjct: 216 CGFCSVPSVFGYARSRDEEDILKEVEALLKEGVNRIVLSAPDFLDYKRGEKLINPYFP-- 273

Query: 84  IEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
            EP  + I  +L          +   +      +       + + K     I +G +S +
Sbjct: 274 -EPNYEAIESLLSKCKDLADKYNANVLIENIKANLFNEKVAEIFSKYLKTPIYIGCESGD 332

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA--V 199
           +   + LGR     + + A+ +A+    +     IY LP +     +  +         +
Sbjct: 333 KNHCKLLGRPTTPDDVLKAVKIAKKYNLKAQVYFIYGLPGENEETAKNTVNFMHKIKNYI 392

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D +++Y+      + F  
Sbjct: 393 DKITVYKFRPLPMSAFQN 410


>gi|260910435|ref|ZP_05917107.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
           472 str. F0295]
 gi|260635511|gb|EEX53529.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
           472 str. F0295]
          Length = 440

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   + S L E++ ++Q  G + ++ +     +   +  +
Sbjct: 155 CDNFCHYC---IVPYTRGRERSRDVDSILNEVRNLQQQ-GYKEVTLLGQNVNSYRFVNDE 210

Query: 88  ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               +   +L  +A+          T   +P  +     +   +       I L +QS  
Sbjct: 211 GQTVDFPQLLRLVAEAVPTMRIRFST--PHPKDMSDATLRVIAEVPNVCRHIHLPIQSGS 268

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R +     ++ +   R + P   +S D+      +T    E  L+       
Sbjct: 269 DKVLKLMNRKYTVEWYLSRVKAIRELVPDCGLSTDIFVGYHGETEADHEESLRIMREVGY 328

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   K
Sbjct: 329 DSAFMFKYSERPGTYASK 346


>gi|225018478|ref|ZP_03707670.1| hypothetical protein CLOSTMETH_02425 [Clostridium methylpentosum
           DSM 5476]
 gi|224948749|gb|EEG29958.1| hypothetical protein CLOSTMETH_02425 [Clostridium methylpentosum
           DSM 5476]
          Length = 622

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 75/243 (30%), Gaps = 23/243 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C YC             E  ++   L  +    Q      +  + F   T +    
Sbjct: 225 CPYRCGYC---------LSSIERGVRFLPLERVFHDLQFFLDHKVRQVKFVDRTFNCNRS 275

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
             +A+       +  V++      E N  +++  +       + G+ +  +G+Q+  +Q+
Sbjct: 276 HALAIWKFLDEHDNGVTN---FHFEINADTLDKESVNFLTTVRRGLFQFEIGIQTTNQQT 332

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R ++       +   ++     +  DLI  LP +    +        +   D   
Sbjct: 333 LGEIHRKNDFDRISRIVRRLQSRQNIHLHLDLIAGLPGEGYESFCKSFNDVYALCPDQFQ 392

Query: 204 LYQLTIEKGTLFYKMHK-------DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           L  L + KG+      +       D           +    + +       +  Y  SN 
Sbjct: 393 LGFLKVLKGSDIAHRQQELGIVSRDIAPYEVLFTKELSFKEMLRLKMIEEMVEQYYNSNR 452

Query: 257 SFL 259
             L
Sbjct: 453 YKL 455


>gi|167039779|ref|YP_001662764.1| biotin synthase [Thermoanaerobacter sp. X514]
 gi|166854019|gb|ABY92428.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
          Length = 352

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  +Q          +      + +I    G    
Sbjct: 67  YCSNTCFYCGLRGPNRTIKRYRMEPEEILQCV--------KYGASVGLKTIVLQSGEDKY 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 119 FKITTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 171

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 172 LYQKLHPGMSYENRVRCLMDLRELGYEVGTGSLVGLPGQTLEMLAQDLIFFKKIDADMLG 231

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 232 IGPFIPCENTPLER 245


>gi|78187178|ref|YP_375221.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
 gi|78167080|gb|ABB24178.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
          Length = 471

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  +   + EM++ ++      I+  F          P+
Sbjct: 209 CPVGCNFCTTPTIYGKNYRYRE--LDLVIEEMRYHQERLQKEKINLSFMDDNI--SFRPK 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ ++K       V      + + ++         ++G + +S+G +SL  ++L+
Sbjct: 265 YFMTLLEEMSKI-----GVRWNANISMNFLDKPEVAELAGRSGCDLLSIGFESLNPETLK 319

Query: 147 FLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N  +  A  +         +    ++     T   +++     +   ++     
Sbjct: 320 SVHKGSNRLDNYAKVVDNLHRNGIAIQGYFMFGFDNDTEESFQLTYDFIMKNRIEFPVFS 379

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
            +T   GT ++   K        +      Y         +++         E+
Sbjct: 380 LVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPQGMGGETLLKNFVKLQQEV 433


>gi|74003948|ref|XP_545362.2| PREDICTED: similar to CDK5 regulatory subunit associated protein
           1-like 1 isoform 1 [Canis familiaris]
          Length = 557

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PALLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATDIICGFPGETDQDFQETVKLVEDYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              L + Q     GT   KM +    V+      +       S         YE
Sbjct: 385 FPSLFINQFYPRPGTPAAKMVQVPAQVIGERQQVLVTEESFDSKFYVAHNRFYE 438


>gi|107023628|ref|YP_621955.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           cenocepacia AU 1054]
 gi|116690713|ref|YP_836336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
           HI2424]
 gi|170734056|ref|YP_001766003.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           cenocepacia MC0-3]
 gi|254247273|ref|ZP_04940594.1| hypothetical protein BCPG_02060 [Burkholderia cenocepacia PC184]
 gi|123244709|sp|Q1BTS3|MIAB_BURCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890456|sp|B1JY57|MIAB_BURCC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890457|sp|A0KAB6|MIAB_BURCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|105893817|gb|ABF76982.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
           AU 1054]
 gi|116648802|gb|ABK09443.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
           HI2424]
 gi|124872049|gb|EAY63765.1| hypothetical protein BCPG_02060 [Burkholderia cenocepacia PC184]
 gi|169817298|gb|ACA91881.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
           MC0-3]
          Length = 457

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 16/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTDIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    +
Sbjct: 331 GYDTSFSFIYSPRPGTPAANL 351


>gi|304383561|ref|ZP_07366021.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella marshii DSM
           16973]
 gi|304335371|gb|EFM01641.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella marshii DSM
           16973]
          Length = 441

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 17/221 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTP 81
           C   C YC            +   I+S + E+  +++          ++++S  F     
Sbjct: 155 CDNFCHYC---IVPYTRGRERSRDIESIVKEVHDLQEKGFKEITLLGQNVNSYRFQPADG 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           S         +L  +A+ +        T   +P  +         +     N I L VQS
Sbjct: 212 S--SEIGFPQLLRHVARAFPKMRVRFST--PHPKDMSDETLHVIAEEPNLCNHIHLPVQS 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R + A      +   R I P   +S D+      +        L      
Sbjct: 268 GSNKVLKLMNRRYTAEWYRDRVAAVRRIIPDCGLSTDIFVGYHGEEEEDHRQSLALMEEI 327

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
             D   +++ +   GT   K   D            ++ +L
Sbjct: 328 VYDSAFMFKYSERPGTYASKHLPDNVPEEIKLRRLAEMIDL 368


>gi|294625996|ref|ZP_06704606.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664199|ref|ZP_06729579.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292599666|gb|EFF43793.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292606024|gb|EFF49295.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 484

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGTPS 82
           C  YC F      R +     F    +   Q   Q       L    +     +G     
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGD 249

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++ L++  IA+   +      T  ++P     +    YR      N + L VQ+ 
Sbjct: 250 TAQYADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|157376749|ref|YP_001475349.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Shewanella sediminis HAW-EB3]
 gi|157319123|gb|ABV38221.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Shewanella sediminis HAW-EB3]
          Length = 293

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 13/220 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC YC     VR     +   I+    ++Q  ++  G   ++ +F   G    +    + 
Sbjct: 29  KCTYCSMYKDVR----YRVRTIEELKEDIQMAKKAYG-AGVNKVFLSDGDAISLPTDTLL 83

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IL  +           ++  A P S     +      RKAG+    LGV+S  ++ L  
Sbjct: 84  EILSELY--GAFPELTHVSTYAGPQSTLSKTLEELTQLRKAGLTMTYLGVESGSDRVLTE 141

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSL 204
           + +  +A E + A         ++   ++  L  +            +         L  
Sbjct: 142 VRKGVSAKEMLEAGSNIVKSGIKLVAMVMVGLGGRGERSRIHAIETAELINRMKPYLLGT 201

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
                  GT+ ++    GD  L      ++   +     +
Sbjct: 202 LTTVPMPGTVLHRQMSKGDFKLLDPYEVLEEMKVLLEHLT 241


>gi|238066631|sp|Q2JK17|RIMO_SYNJB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
          Length = 473

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C     +   +  Q    I+S L E + + +      +  +       +    
Sbjct: 179 CNYRCSFC----IIPHLRGDQRSRSIESILREAEQLAEEG----VQELILISQITTHYGI 230

Query: 87  QNI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
                  + D I     +       + A P+ V     +  ++    +  + L +Q    
Sbjct: 231 DLYGEPRLADLIRALGKIPIPWIRMLYAYPTGVTPAVVEAIQETPNFLPYLDLPLQHSHP 290

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L+ + R          I   R   P        I   P +T   ++  L     +  D
Sbjct: 291 QILKAMNRPWQGQVNDRVIERLRQALPNAVLRTSFIVGFPGETEEHFQHLLDFVQRHQFD 350

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
           H+ ++  + E+GT  Y +   
Sbjct: 351 HVGVFTFSPEEGTPAYHLPHQ 371


>gi|256827193|ref|YP_003151152.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641]
 gi|256583336|gb|ACU94470.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641]
          Length = 409

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 14/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    HV R K              +          ++ I  G  T +     
Sbjct: 140 CSAACTFC--IVHVARGKAFSRPLPDVLREAHELYDAGVREVVLTGINLGTYTSNNANLA 197

Query: 88  NI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAG--VNRISLGVQSLEEQ 143
            +   ++D + K     S++E      P        +   R+ G     + L +QS   +
Sbjct: 198 KVAQQLIDEMPKLRVRISSIE------PLHATDELIEVLSRQEGRVCRHLHLPLQSGSSK 251

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R ++A + ++ +   R   P +S   D+I   P +T   ++  L    +     
Sbjct: 252 VLHEMARPYSAEQFLSIVERIRTAVPEVSLSTDIIVGFPGETDQDFQATLDMVRACRFSK 311

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ +   GT         D
Sbjct: 312 VHVFRYSKRAGTPAAARTDQID 333


>gi|326430372|gb|EGD75942.1| CDK5 regulatory subunit-associated protein 1 [Salpingoeca sp. ATCC
           50818]
          Length = 632

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 35/220 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   + + L E+Q + +  G + ++ +  G    S ++  
Sbjct: 280 CDNMCSYC---IVPFTRGRERSRPVSAILREVQQLSEQ-GVKEVTLL--GQNVNSYLDHS 333

Query: 88  NI--------------ALILDGIAKNWTVSSNVEITIEANPS-----------SVEVNNF 122
            I                I        T +  +E   + +P                   
Sbjct: 334 QISVATAAPVVNTPGFKTIYKRKKDGITFAQLLEQVAQVDPEMRIRFTSPHPKDFPDEVL 393

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYA 178
              R      N+I L  QS  +  L  + R +  +     +    ++ P ++   D I  
Sbjct: 394 HVIRDHHNVCNQIHLPAQSGSDAVLDRMRRGYTHAAYCELVDRIHDLIPDVTLSSDFISG 453

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              +T       L+       D   L+  ++ + T  ++ 
Sbjct: 454 FCGETEADHLDTLRLLEYVKYDMAYLFAYSLREKTHAHRR 493


>gi|256827179|ref|YP_003151138.1| MiaB-like tRNA modifying enzyme YliG [Cryptobacterium curtum DSM
           15641]
 gi|256583322|gb|ACU94456.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cryptobacterium
           curtum DSM 15641]
          Length = 477

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 73/219 (33%), Gaps = 16/219 (7%)

Query: 14  QGSNSL-GVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRS 70
             S+ L   YV     C + C YC       RY       I++     +    +     +
Sbjct: 178 ASSDPLYSAYVKISDGCDRFCSYCTIPFIRGRYHSFTFEVIEAEVTRCIDSGAREIVLIA 237

Query: 71  ISSIFFGGGT--PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
             +  +G     PS +     A ++  +A+           +   P  V           
Sbjct: 238 QDTGRWGQDFDQPSTL-----ACLMARLAELHP--DTWFRVMYLQPEGVTDELLAAMASH 290

Query: 129 G--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTM 184
               + + +  Q  +E+ L  + R  + +     I   R+  P ++    +I   P +  
Sbjct: 291 DNICSYLDIPFQHADERLLTSMNRRGSRAGYQTLIEHVRSCVPGITLRTTMIAGYPGERD 350

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +E  L+      +D++ ++  + E+GT   ++    D
Sbjct: 351 EDFEEMLEFIDEADLDYVGVFAYSQEEGTRAARLSDQVD 389


>gi|222099056|ref|YP_002533624.1| Radical SAM domain protein precursor [Thermotoga neapolitana DSM
           4359]
 gi|221571446|gb|ACM22258.1| Radical SAM domain protein precursor [Thermotoga neapolitana DSM
           4359]
          Length = 475

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 83/215 (38%), Gaps = 22/215 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+++C +C F  +++  +  + +  +S + E+ W              +G  + ++ +  
Sbjct: 223 CIRRCAFCIFGKNLKPARFVRPDRFESLVEEIPWK------------EYGLISATITDYP 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +LD + ++                 +     +  +++G    ++  ++  ++    
Sbjct: 271 WLNELLDVVERHQ----LKISVSSLRLDRLSERLLKVLKESGQRSFTIAPEAGSQKIRDI 326

Query: 148 LGRNHNASEAIAAIHLARN-IFPRMSFDLIYALPKQTMTQWEM-----ELQRALSYAVDH 201
           L ++    +   A+ +ARN  F R+    IY L ++T           EL   + Y   H
Sbjct: 327 LKKDITDEQIEIALKMARNVGFDRIKMYFIYGLEEETEEDLRAFRKIGELALQMGYREVH 386

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           +S   L  + GT F +   +   VL  +   +  Y
Sbjct: 387 MSFNPLIPKPGTDFEERRMEPVDVLREKEKFLKEY 421


>gi|182434366|ref|YP_001822085.1| putative Fe-S oxidoreductase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326774878|ref|ZP_08234143.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|178462882|dbj|BAG17402.1| putative Fe-S oxidoreductase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326655211|gb|EGE40057.1| Radical SAM domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 482

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 79/217 (36%), Gaps = 17/217 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   +  RR +      +   + E++  ++  G     SI++G  T + + P+
Sbjct: 221 CPYKCTFCTIQTIGRRPEYFP---LDRVIKEIRAYQKHYGDHH--SIYWGDETFT-LHPE 274

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-FQGYRKAGVNRISLGVQSLEEQSLR 146
               +L+ + +    + ++    +   + +  +   +  + +G   + +G+++  ++S  
Sbjct: 275 YTLELLEALEQ----AGDIRYDCQTRLNCLTDDRILRKLKSSGCQWVEIGLETGFQESHE 330

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL--- 202
              ++H         +   R+         +   P Q+       +        + L   
Sbjct: 331 T-HKHHMKLDAVRDTLKRVRDAGLAACSFTVNGFPDQSPDDMRRSIDWVCRLLDEDLLQA 389

Query: 203 -SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
             L+ L    G+  ++  +   + L   +  +   +L
Sbjct: 390 TYLFGLVPYPGSAMFEHPERFGMKLLHRDFRLYHEDL 426


>gi|322385961|ref|ZP_08059601.1| TIGR01212 family radical SAM protein [Streptococcus cristatus ATCC
           51100]
 gi|321269944|gb|EFX52864.1| TIGR01212 family radical SAM protein [Streptococcus cristatus ATCC
           51100]
          Length = 315

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRDRYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|311259791|ref|XP_003128247.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1-like
           [Sus scrofa]
          Length = 578

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTSL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PALLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   ++  P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDTVLMDMKREYCVADFKRVVDFLKDKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 385 FPSLFINQFYPRPGTPAAKM 404


>gi|300914977|ref|ZP_07132292.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|300888701|gb|EFK83848.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
          Length = 349

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  +Q          +      + +I    G    
Sbjct: 64  YCSNTCFYCGLRGPNRTIKRYRMEPEEILQCV--------KYGASVGLKTIVLQSGEDKY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 116 FKITTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 168

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 169 LYQKLHPGMSYENRVRCLMDLRELGYEVGTGSLVGLPGQTLEMLAQDLIFFKKIDADMLG 228

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 229 IGPFIPCENTPLER 242


>gi|258516263|ref|YP_003192485.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779968|gb|ACV63862.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 446

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 14/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + +F+   +  ++        + +          +     
Sbjct: 155 CDNKCSYCA-------IPGIRGSFLSRKIDSIKKEAAALAAQGVREAVLIAQDTTKYGFD 207

Query: 88  NIALI-LDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 L  + K  T+ +++E    +   PS                   + + +Q   +
Sbjct: 208 LYGKFSLSNLIKELTLINDIEWIRLLYCYPSKFTPELIDVLASEKKVCRYLDIPLQHASD 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R+  A +    I   R     ++     I   P +T   ++  L        D
Sbjct: 268 SILLSMNRSGTAEQNRRLIEKLRQAVSGIALRTSFIVGFPGETEADFQTLLDYMQEIRFD 327

Query: 201 HLSLYQLTIEKGTL 214
            + ++  + E+ T 
Sbjct: 328 RVGIFVYSPEEDTP 341


>gi|257468752|ref|ZP_05632846.1| Radical SAM domain protein [Fusobacterium ulcerans ATCC 49185]
 gi|317063006|ref|ZP_07927491.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
 gi|313688682|gb|EFS25517.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
          Length = 407

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 17/193 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C     +          ++  + E++ ++          I F    P+   P+
Sbjct: 150 CDNKCSFCA----ISEMWKSNPRPVEDVIEEIKSLKS-------DKIIFF--DPNFFYPK 196

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             +L L    +   +      T +A     +    +  +++G + I +G +SL E++L+ 
Sbjct: 197 EYSLKLMKEMEKLKIKWAGNGTADA---PFDDELMEAAKRSGCSGILIGFESLREETLKG 253

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +   N       I  A      ++   +  +   T        ++     +D      
Sbjct: 254 VNKKFSNVERYKDCIDRAHKYNIAINGCFVLGMDGDTEEDLLALPEKIKYLGLDLARFSI 313

Query: 207 LTIEKGTLFYKMH 219
           LT    +  Y+  
Sbjct: 314 LTPLPNSELYRKM 326


>gi|255525224|ref|ZP_05392166.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium
           carboxidivorans P7]
 gi|255511087|gb|EET87385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium
           carboxidivorans P7]
          Length = 449

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +  +P     +      +      ++ L VQS   + L+ + R++   + +  +   R  
Sbjct: 246 MTPHPKDFTQDVLDAIAECENVCEQVHLPVQSGSSRILKKMNRHYTKEQYLDLVRRIRET 305

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            P ++   D+I   P +T   +E  L  A     D    +  +  KGT 
Sbjct: 306 IPDVAITTDIIVGFPGETEEDFEETLSLAREVQYDSAFTFIYSRRKGTP 354


>gi|240144123|ref|ZP_04742724.1| RNA modification enzyme, MiaB family [Roseburia intestinalis L1-82]
 gi|257203915|gb|EEV02200.1| RNA modification enzyme, MiaB family [Roseburia intestinalis L1-82]
 gi|291536225|emb|CBL09337.1| SSU ribosomal protein S12P methylthiotransferase [Roseburia
           intestinalis M50/1]
          Length = 444

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K+C YC       ++ S      + Q    + +   E+  + Q T    +        
Sbjct: 158 CNKRCTYCIIPYIRGNYRSVPMEDLIEQAKELVAAGAKELILVAQETTLYGVD------- 210

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   +++  +LD + K   +       +   P  +         +     + + + +
Sbjct: 211 ---LYGEKSLHRLLDELNKIKDLFWIR--IMYCYPEEIYEGLIDAMIRNQKVCHYLDIPI 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  + ++ +  I   R   P ++    LI   P +T    E  +Q   
Sbjct: 266 QHANDTILKRMGRRTSNADLVKIITHLRERIPDITLRTTLICGFPGETQEMHEELMQFIN 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L  +  + E+GT   +     D  L  ++   D+  L + I
Sbjct: 326 DMEFDRLGAFTYSPEEGTPAAEFTDQVDENL-KKDWQADVMELQEEI 371


>gi|170759700|ref|YP_001787951.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum A3
           str. Loch Maree]
 gi|169406689|gb|ACA55100.1| putative cobalamin-dependent enzyme [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 561

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 6/149 (4%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAI 158
            + ++     E +   +     +   K    RI    GVQ+   + L+ + R+ N     
Sbjct: 244 NLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIK 303

Query: 159 AAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF-- 215
             +   +N+   +   DLI  LP +    ++       S   + + L  L + KG+    
Sbjct: 304 EKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSSMRL 363

Query: 216 -YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +         P   +        + + 
Sbjct: 364 EAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|28211649|ref|NP_782593.1| Fe-S oxidoreductase [Clostridium tetani E88]
 gi|28204091|gb|AAO36530.1| Fe-S oxidoreductase [Clostridium tetani E88]
          Length = 433

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 8/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R  +  +   +      + +       ++S I          +  
Sbjct: 152 CNSFCSYC--LIPFARGGICSKEPKKVIEEIKKLVEHGFKEVTLSGIQISLYGNDFQDNW 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
           ++  +L+ I K   +      +I   P   + +    +   K       L +QS  +++L
Sbjct: 210 DLITLLEEIDKIEGIERVRIGSIS--PKYFKDDIIDRFSNLKKLCPHFHLSLQSGCDETL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++   E    +   R     +S   D+I   P ++  +++   +      +  + 
Sbjct: 268 KRMNRSYTTEEYRYIVQKLREKIKGVSITTDIIVGFPGESEEEFKKTHRFLEEIKLSKMH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           +++ +   GT   ++ +  D
Sbjct: 328 IFKYSPRSGTKAAEIQEQID 347


>gi|317504443|ref|ZP_07962422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella salivae DSM
           15606]
 gi|315664431|gb|EFV04119.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella salivae DSM
           15606]
          Length = 444

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 60/201 (29%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C   C YC     +  Y  G+E       + +  ++ L           G      G  P
Sbjct: 156 CNNFCHYC-----IVPYTRGRERSRD-VESILAEVKDLHDKGFKEVTLLGQNVNSYGLLP 209

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +   P+N     + + K      ++ +     NP  +  +              I    Q
Sbjct: 210 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMSEDILHAIADEPNLCKHIHFPAQ 269

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +   + +  +   + I P      D+      +T    E  L     
Sbjct: 270 SGSNKILKLMNRKYTREDYLDKVAAIKRIIPGCGLTTDIFVGYHNETEEDQEQTLSLVKE 329

Query: 197 YAVDHLSLYQLTIEKGTLFYK 217
              D   +++ +   GT   K
Sbjct: 330 VGYDSAFMFKYSERPGTYAAK 350


>gi|289449481|ref|YP_003474956.1| ribosomal protein S12 methylthiotransferase RimO [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184028|gb|ADC90453.1| ribosomal protein S12 methylthiotransferase RimO [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 453

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 60/201 (29%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            + + I   + ++         +++  +       +     
Sbjct: 165 CSNTCAYCA-------IPGIRGHMISRPMEDITAEADNLLQQNVKELIIVAQDTTAYGVD 217

Query: 88  NIAL--ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + + K   +  +  I +       +               + I + +Q   +
Sbjct: 218 LYKERKLPELLQKICALPYDFHIRLLYCYSDGMTEELLTVLADEPKICHYIDMPIQHASD 277

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR          +H  R   P + F   ++   P +T   +   +Q       +
Sbjct: 278 HVLKLMGRKDTKENIYRIMHTWRQRIPDIVFRTTVMVGFPGETEADFNELIQLIKDLRFE 337

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            L  ++ + E+GT   +M   
Sbjct: 338 RLGCFEFSPEEGTKAVRMPDQ 358


>gi|225867954|ref|YP_002743902.1| radical SAM superfamily protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225871131|ref|YP_002747078.1| radical SAM superfamily protein [Streptococcus equi subsp. equi
           4047]
 gi|225700535|emb|CAW95006.1| radical SAM superfamily protein [Streptococcus equi subsp. equi
           4047]
 gi|225701230|emb|CAW98178.1| radical SAM superfamily protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 313

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 49  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVNQYLVYFQNFTNT---HDKLEV 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E + + +
Sbjct: 106 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAELSERMHVTVELGLQTTYEATSQLI 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R   P ++    LI  LP +T       ++R +    +  + L+
Sbjct: 166 NRAHSYDLYKETVQRLRQY-PNINIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLH 224

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 225 LLHLMTNTRMQRDYHEGRLQL 245


>gi|212695877|ref|ZP_03304005.1| hypothetical protein ANHYDRO_00410 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677131|gb|EEB36738.1| hypothetical protein ANHYDRO_00410 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 344

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 11/193 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +R+  +  E +  +F   +    ++       +    GG     + 
Sbjct: 54  FCKNNCYYCG----IRKSNLNVERYRLNFDEII-MCAKIGYKLGYRTFVLQGGEDLKFKD 108

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           ++I  I++ I K        +  I  +        ++ +  AG +R  L  ++  +    
Sbjct: 109 EDICKIVEEIKKIHP-----DCAITLSIGERSKEAYRSFFNAGADRYLLREETSNKNHYY 163

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L  +  +      A+   + I  ++    +   P Q       +L+       D + + 
Sbjct: 164 KLHPKEMSFENRRKALFDLKEIGFQVGGGFMVGSPYQKDEDLISDLRFLQELKPDMIGIG 223

Query: 206 QLTIEKGTLFYKM 218
               +  T F  M
Sbjct: 224 PYLSQHDTPFKDM 236


>gi|307110241|gb|EFN58477.1| hypothetical protein CHLNCDRAFT_19538 [Chlorella variabilis]
          Length = 499

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 20/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPS 82
           C+  C YC    H R      +      +            R I      +  +G    +
Sbjct: 212 CLGACTYCK-TKHARGQLGSYDP--AELVRRAAAAAADPQVREIWLSSEDTGAYGRDIGT 268

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG----YRKAGV-NRISLGV 137
            +       +L  + +         + +        + +        R   V + + + V
Sbjct: 269 SLPA-----LLRELVEVLPPDGRCMLRVGMTNPPFILEHLAEVGAILRDDRVFSYLHVPV 323

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +  L  + R ++A++        LA      ++ D+I   P +T       L    
Sbjct: 324 QSGSDAVLTAMRREYSAAQFRRVCDTLLAAVPGLELATDIICGFPGETEEDHGATLALLD 383

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHK 220
            Y   H  + Q     GT   +M +
Sbjct: 384 KYRFPHCHISQFYPRPGTPAARMRR 408


>gi|289207829|ref|YP_003459895.1| radical SAM protein [Thioalkalivibrio sp. K90mix]
 gi|288943460|gb|ADC71159.1| Radical SAM domain protein [Thioalkalivibrio sp. K90mix]
          Length = 390

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 22/227 (9%)

Query: 28  CVKKCPYCDFNSH-------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C   C YC    H         R  +  +     +   ++ ++          +     T
Sbjct: 68  CRANCSYCGLARHREESRDYADRNFIRVDWPTAKYDEVIERVKNHADGGQFERMCISMIT 127

Query: 81  -PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P+     +   +L+          ++ ++I +NP+++   + Q  R  G +  ++ + +
Sbjct: 128 HPN--SDADTVELLERWVAEVN---HIPVSILSNPTTMSYEDLQLLRDKGADIFTVALDA 182

Query: 140 LEEQSL-----RFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQ 192
           +  +       + +   H+  +   AI  A  IF   +    LI  +  +T  +     Q
Sbjct: 183 VTPEIFERTRGKSVESPHSWDKYWQAIEWAAEIFGPEKFGAHLICGM-GETEEEILQVCQ 241

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           R       H  ++    E+G+L    +           +   + +  
Sbjct: 242 RIRDLG-GHNHMFAFFPEEGSLMEDWNPVPRDQWRRVQLGRFVIDYA 287


>gi|51473976|ref|YP_067733.1| tRNA-methylthiotransferase (MiaB protein) [Rickettsia typhi str.
           Wilmington]
 gi|81389933|sp|Q68VU1|MIAB_RICTY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|51460288|gb|AAU04251.1| tRNA-methylthiotransferase (MiaB protein) [Rickettsia typhi str.
           Wilmington]
          Length = 445

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 6/162 (3%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVN--NFQGYRKAGVNRISLGVQSLEEQSLR 146
           +A +L  +A+   +       + ++P  +  +     G     +  + L VQS   + L+
Sbjct: 223 LADLLKHLAQIPNLERLRY--MTSHPIDMTDDLIKLHGTEPKLMPFLHLPVQSGSNKILK 280

Query: 147 FLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R H+       I+  R     +  S D I   P +T   +E  L             
Sbjct: 281 AMNRKHDRDYYFNIINRLREARSDIVLSSDFIVGFPGETEKDFEDTLDLVQRVKYGQCYS 340

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++ +   GT            + S+ + +    L     + +
Sbjct: 341 FKYSPRPGTPGAIRTDQIPEHIKSKRLTILQKELATQQLAFN 382


>gi|89100455|ref|ZP_01173317.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911]
 gi|89084798|gb|EAR63937.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911]
          Length = 450

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
           N+A++L D  A+   +      +IEA+   +     +   K+ V    + + +QS     
Sbjct: 210 NLAMLLRDLEAQVKGLKRLRISSIEAS--QITDEVIEVMDKSEVVVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   +       ++ D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMEFFAERLDRLKEALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY---NLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +E V   +     L +   S       E+
Sbjct: 328 HVFPYSKRTGTPAARMEDQIDEEIKNERVHRLISLSDQLAKEYASQFENEVLEV 381


>gi|308272044|emb|CBX28652.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [uncultured Desulfobacterium sp.]
          Length = 471

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 11/185 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HVR  ++ ++         +  +R+L           G    S    +
Sbjct: 159 CDNYCTYCV-VPHVRGPEISRKP-----EHIIDEIRKLVDSGVQEVTLLGQNVNSYGIKE 212

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +    + +           I     +P  +       +R      N I L VQS     
Sbjct: 213 GLCSFPELLRLVSETEGLFRIRFTTSHPKDLSQELVFAFRDLDKLCNHIHLPVQSGSNNI 272

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +     +  I   R I P ++   D+I   P +T   ++  L        D L
Sbjct: 273 LKRMNRKYTRELYLEKIDKLRKISPDIAITSDVIVGFPGETEDDFKATLDLVKEVEFDSL 332

Query: 203 SLYQL 207
             ++ 
Sbjct: 333 FTFEY 337


>gi|300088213|ref|YP_003758735.1| MiaB family RNA modification protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527946|gb|ADJ26414.1| RNA modification enzyme, MiaB family [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 417

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 43/273 (15%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--------F 76
              C   C YC     +  Y+ G+E      L E+Q        R +  +         +
Sbjct: 131 IQGCDNFCSYC-----IVPYRRGRER--SRTLEELQAELTELVSRGVREVTLLGQNVNAW 183

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
           G   P      ++A +L  +++   +       +  +P  +     +   +       ++
Sbjct: 184 GHDLP---GQPDLADLLTSLSRQEGLLRLRF--LTNHPKDMSERLMRSLAELDKVCPAVN 238

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME-- 190
           L VQ+ +++ L  + R + A E +  +   R   P ++   D+I   P +T  Q++    
Sbjct: 239 LPVQAGDDRVLELMRRGYTAGEYLDLVKRLRQAVPGLALTTDIIVGFPGETEAQFQNTRS 298

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L   + +   HL++Y      GT   + + D            +L  L   I        
Sbjct: 299 LMEQVRFDAVHLAVYS--PRPGTEAAEKYPDDVPRDQKSRRLAELERLQARIAGEI---- 352

Query: 251 YEISNHSFLGA------ESLHNLNYWRYGDYIG 277
               N +  G       E+  N   WR  D  G
Sbjct: 353 ----NAALTGETVEVLVENQ-NRGRWRGRDIRG 380


>gi|291395737|ref|XP_002714277.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           [Oryctolagus cuniculus]
          Length = 571

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  ++D I +   +   +      NP  + + + Q   K          + + VQS 
Sbjct: 271 PTLLWKLVDVIPEGAMLRLGM-----TNPPYI-LEHLQEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++  + +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMAMKREYCVADFKSVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   KM       +P+        +L+Q   S +    
Sbjct: 385 FPSLFINQFYPRPGTPAAKM-----EQVPAHMKKQRTKDLSQVFHSYNPYDH 431


>gi|317498459|ref|ZP_07956754.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894353|gb|EFV16540.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 289

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 18/237 (7%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + +C +C     + + K  +   ++  L ++Q  R     R +  IF   G   + + 
Sbjct: 25  CSQNRCIFCS----MFKEKRFRIRKVEEVLEDLQDARN--KYRYVEKIFLADGDALICKM 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL  I          ++T+  +P S+   +  +    R+ G++ I +G++S  ++
Sbjct: 79  TDLEAILHFIKDQ--FPECKQVTLYGSPRSILMKQQEDLDKLRELGISMIYMGLESGNDE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            L ++ +   + E I A    +    R+S   I  L  + +     +           D+
Sbjct: 137 VLTYMKKGVTSQEMIEAAQKVKQAKIRLSVTAISGLGGRRLWKEHAKDTGLVLSQMKPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-GLHAYEISNHS 257
           + L  L IE+        + G+  L +    +     T+ +            SNH+
Sbjct: 197 IGLLTLMIEEDLPLADKIRSGEFELLNPYDILIE---TKEMLKYMDCPDCIFRSNHA 250


>gi|300854593|ref|YP_003779577.1| hypothetical protein CLJU_c14070 [Clostridium ljungdahlii DSM
           13528]
 gi|300434708|gb|ADK14475.1| putative protein with a radical SAM domain [Clostridium ljungdahlii
           DSM 13528]
          Length = 448

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 81/237 (34%), Gaps = 24/237 (10%)

Query: 32  CPY-CDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           CP+ CDF  NS     K      I   + ++  ++     R I  I           P+ 
Sbjct: 169 CPFECDFCYNSCKSVLKTYINRPIDDVIRDINALK----TRHIMFIDDNFIG----NPKW 220

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
              +L  I     +       + +N   +        + AG   + +G +S+  +S+  +
Sbjct: 221 TKKLLKEIK---PLKLKWNAAVTSNIVDMT-ELLDEMKAAGCQSLFIGFESINSKSIDSV 276

Query: 149 GRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            +   +       +         ++   ++ L +  ++ ++  L+  +   ++ ++ + L
Sbjct: 277 HKVQNSVKRYEKLVEEIHKRGIMINASFVFGLDEDDVSVFKNTLEWIVKNKIETVTSHIL 336

Query: 208 TIEKGTLFYK----MHKDGDLVLPSENVAVDLY----NLTQSITSAHGLHAYEISNH 256
           T   GT  Y      ++  D  L + N A  +Y       + +   +     E+   
Sbjct: 337 TPYPGTKLYSSLMEENRIVDFNLSNYNTAHVVYKPKNMTAEELYKGYLWIYKEVYTF 393


>gi|269837471|ref|YP_003319699.1| MiaB-like tRNA modifying enzyme YliG [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786734|gb|ACZ38877.1| MiaB-like tRNA modifying enzyme YliG [Sphaerobacter thermophilus
           DSM 20745]
          Length = 466

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 23/217 (10%)

Query: 9   NNMTGQGSNSLGVYVHWP-FCVKKCPYCDFN----SHVRRYKVGQENFIQSFLTEMQWMR 63
            + T + +     YV     C   C +C         V +        I+  +       
Sbjct: 133 TSFTRRDAGP-SAYVKIADGCDHGCHFCVIPLIKGRQVSKRPSDVIREIRELVDGGTKEV 191

Query: 64  QLTGPRSISS---IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            L    +I     +    G P L+       ++     +      + I     PS + + 
Sbjct: 192 ILVAQDTIRYGADLGIKNGLPGLL------RMIAEEVPDLPWLRMLYI----YPSPLTLR 241

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LI 176
                 +    V  + + +Q  +   LR +GR  +       I  ARN  P ++    LI
Sbjct: 242 LVDAMTEHPMFVPYLDMPIQHADPTVLRRMGRPSSIDMTRRLIDHARNRLPDVTMRTTLI 301

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
              P +T  Q++           DH+ ++  + E  T
Sbjct: 302 VGYPGETEEQFQRLYDFVAEMEFDHVGVFTYSYEPNT 338


>gi|329957659|ref|ZP_08298134.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
 gi|328522536|gb|EGF49645.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
          Length = 445

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 65/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGSIASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E+  F    K  +    + +QS  ++ L+ 
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIEPNLLTDEIIKFVSRSKRFMPHFHIPLQSGSDEVLKL 274

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +   + +   + + P   +  D+I     +T   +E   +      V  L ++
Sbjct: 275 MRRRYDTALFASKVRRIKEVMPDAFIGVDVIVGTRGETEEYFEQAYRFIQGLDVTQLHVF 334

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 335 SYSERPGTQ 343


>gi|169334037|ref|ZP_02861230.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258754|gb|EDS72720.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM
           17244]
          Length = 438

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   + +   +  +R+L           G    S    L
Sbjct: 157 CNNFCSYC-----IVPYTRGRERS-REYQNILSEVRELANDGVKEVTLLGQNVNSYGKNL 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +P   A +L  +++   +       + ++P  +     +  R        I L +QS  
Sbjct: 211 DDPVPFAKLLKMVSEVEGIERVRF--MTSHPKDLSDELIEVIRDNPKICRHIHLPMQSGS 268

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++    I  +   R   P ++   D+I   P +T   +   L        
Sbjct: 269 SRILKLMNRHYDKDTYIKLVKKIRREIPDVAITTDIIVGFPTETEEDFLDTLDVYKKCEF 328

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    +  +  +GT    M    D
Sbjct: 329 DTAFTFIYSKREGTKAAVMDGQID 352


>gi|114705323|ref|ZP_01438231.1| hypothetical protein FP2506_10301 [Fulvimarina pelagi HTCC2506]
 gi|114540108|gb|EAU43228.1| hypothetical protein FP2506_10301 [Fulvimarina pelagi HTCC2506]
          Length = 424

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C  +C +C     +  Y  G    +      ++ +++L        +  G    S    L
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVEQVKRLVASGYNEVVLSGVDMTSWGADL 203

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++  I KN      + ++   +    +    +        +  + L +Q+ +
Sbjct: 204 PGAPKLGKLIQSILKNVPDLPRLRLS-SIDSVEADEALIEAIASDPRVMPHLHLSLQAGD 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H  +++IA     R   P + F  DLI   P +T   +E  L+      +
Sbjct: 263 DMILKRMKRRHLRADSIAFCTEMRRKRPDIVFGADLIAGFPTETEAMFENTLKLVEECGL 322

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +  +GT   +M +
Sbjct: 323 TFLHVFPFSPREGTPAARMPQ 343


>gi|288802855|ref|ZP_06408292.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18]
 gi|288334672|gb|EFC73110.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18]
          Length = 449

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 64/190 (33%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   IQS + + +   +  G + I       G       +
Sbjct: 167 CNYFCTYC---TIPFARGFSRNPTIQSLVAQAEEAAR-EGGKEIVLTGVNIGDFGKTTGE 222

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
           +   ++  + K   +      ++E  P  ++        +  A +    + +QS  ++ L
Sbjct: 223 SFLDLVKALDKVEGIQRFRISSLE--PDLIDDELIAYCAESRAFMPHFHIPLQSGSDEVL 280

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R ++ +     I L +   P   +  D++     +    +E       S  V  L 
Sbjct: 281 ELMHRRYDTALFARKIKLIKEKMPDAFIGVDVMVGSRGERPEYFEDCYNFLDSLPVTQLH 340

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 341 VFPYSERPGT 350


>gi|290579948|ref|YP_003484340.1| hypothetical protein SmuNN2025_0422 [Streptococcus mutans NN2025]
 gi|254996847|dbj|BAH87448.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 310

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +      F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNT---HDKVEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I +   +    S  + I I   P     V +       +     + LG+Q+  E++ + +
Sbjct: 100 IRERYEQAINESGVIGINIGTRPDCLPDVTILYLAELSQRLHVTLELGLQTTYEKTSKLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R++ P++     LI  LP ++       ++R +    +D + L+
Sbjct: 160 NRAHSYQLYVETVKRVRDLAPKVEIVSHLINGLPGESHEMMLENVRRCVTDNDIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S    V++      I   + +  
Sbjct: 220 LLHLMTNTRMQRDYHEGRLHLLSMEEYVNIICDQLEIIPKNIVIH 264


>gi|161528769|ref|YP_001582595.1| MiaB-like tRNA modifying enzyme [Nitrosopumilus maritimus SCM1]
 gi|160340070|gb|ABX13157.1| MiaB-like tRNA modifying enzyme [Nitrosopumilus maritimus SCM1]
          Length = 422

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 30/206 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----------PRSISSIFF 76
           C+ +C +C      +  K   +++       ++ ++                        
Sbjct: 145 CMSECTFC----QTKISKGDLQSY--RLGDIVRQVKTEINEGCKEVWLTSTDNGCYGFDI 198

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAGVNRIS 134
           G   PSLI    ++ I +       + + + +    E    S + +            + 
Sbjct: 199 GTDLPSLINA--VSEIPEEFMIRVGMMNPMYMPRIKEKLIESYDNDKV-------FKFLH 249

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQ 192
           + VQS  ++ L  + R H A      +  AR  FP   +S D+I   P +T   +E  ++
Sbjct: 250 IPVQSGSDKVLHDMKRGHTAGTFREIVKKARERFPDFTISTDIIVGFPSETKEDFEKTVE 309

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKM 218
                  D ++L + +   GT   + 
Sbjct: 310 LLDETRPDVVNLSKYSARPGTEAAEW 335


>gi|146303440|ref|YP_001190756.1| RNA modification protein [Metallosphaera sedula DSM 5348]
 gi|145701690|gb|ABP94832.1| RNA modification enzyme, MiaB family [Metallosphaera sedula DSM
           5348]
          Length = 418

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 72/242 (29%), Gaps = 28/242 (11%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENF-----IQSFLTEMQWMRQLTGPRSISSIFF 76
            P    C   C +C      +  +    ++     +++    ++   +        +  +
Sbjct: 134 IPIADGCAGSCNFC----ITKLARKELRSYPPRMIVETARKAIEKGAKEIELTGQDTAAY 189

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN----- 131
           G      ++      + D + +  ++  +  + +      + +        A  N     
Sbjct: 190 G------LDLGRDIRLADLVGEVSSLEGDFMVRVGMMTPELAMRQLDDLLDAWDNPKVYK 243

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
              L VQS  +Q LR + R +   E    +   R  FP ++   D+I   P +    +E 
Sbjct: 244 FFHLPVQSGNDQVLRAMNRKYTLDEFREIVREIRKRFPLVNITTDIIVGHPGEDENAFED 303

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L        + + +   ++   T   +      +  P +   +          S     
Sbjct: 304 TLNLMKELRFERIHIAMYSLRPNT---RSAMMTQVPGPIKKERLKRAVTLYEELSREIHR 360

Query: 250 AY 251
            Y
Sbjct: 361 EY 362


>gi|295092823|emb|CBK78930.1| Fe-S oxidoreductase [Clostridium cf. saccharolyticum K10]
          Length = 291

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 14/195 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           +C +C    HV    +  E        E+  ++ L G      +F G G    +  + + 
Sbjct: 31  RCIFCTLFKHVSSRLLPMEQ----IQAELSRVKTLGGNP--ERVFLGDGNAFGLPTERLL 84

Query: 91  LILDGIAKNWTVSSNVEITIE---ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            ILD    +    +  E+ ++    N         +   +AG   + LG++S   + LRF
Sbjct: 85  EILD--RIHEAFPACREVNMDATVTNIREKSDEELRALFQAGARGLYLGIESGMAKVLRF 142

Query: 148 LGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDHLSL 204
           + ++H    EA   I   R      +  L+  L  +       E   +       D +  
Sbjct: 143 MKKDHTPEEEAYREIGRIREQGFSYNAHLMLGLAGKGNGQKNAEETARFINRTEPDRIIN 202

Query: 205 YQLTIEKGTLFYKMH 219
           + + + +    ++  
Sbjct: 203 FTIFLHREAPLWREI 217


>gi|210621258|ref|ZP_03292564.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
 gi|210154869|gb|EEA85875.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
          Length = 349

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N + +RY++ +E  +       +            +    GG  + 
Sbjct: 61  YCKNDCYYCGIRRSNKNAQRYRLSKEQILSCCENGYEL--------GFRTFVMQGGEDAF 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I+  I + +    +  +T+     S    +++  ++AG +R  L  ++ +  
Sbjct: 113 FKDDVVCDIVSSIKERY---PDCAVTLSLGERST--ESYRKMKEAGADRYLLRHETFDNI 167

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L     +       +   + +  +    ++   P QT+     +L        + +
Sbjct: 168 HYNKLHPVELDPENRKRCLRDLKALRYQTGTGIMVGSPYQTLENIAEDLLFIKELNPEMI 227

Query: 203 SLYQLTIEKGTLF 215
            +      K T F
Sbjct: 228 GIGPFIPHKDTPF 240


>gi|169350536|ref|ZP_02867474.1| hypothetical protein CLOSPI_01304 [Clostridium spiroforme DSM 1552]
 gi|169292856|gb|EDS74989.1| hypothetical protein CLOSPI_01304 [Clostridium spiroforme DSM 1552]
          Length = 362

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 11/193 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +R+  +    + +    E+             +    GG     + 
Sbjct: 73  YCKNDCYYCG----LRKSNLKALRY-RLNKEEILLCCNEGYKLGFRTFVLQGGEDLYYDD 127

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  I+  I   +      +  I  +        +Q Y  AG NR  L  ++  E+   
Sbjct: 128 DLMVDIIKSIRNLYP-----DCAITLSLGEKSKETYQKYYDAGANRYLLREETYNEEHYY 182

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L  R  +  + I  +   + I  +     +     QT+     +L        + + + 
Sbjct: 183 MLHPREMSFKKRIKCLFNLKEIGFQTGCGFMVGSYLQTIDHLVNDLLFIKELQPEMVGIG 242

Query: 206 QLTIEKGTLFYKM 218
              + + T F   
Sbjct: 243 PFLVHQDTPFKNQ 255


>gi|154174024|ref|YP_001409232.1| radical SAM domain-containing protein [Campylobacter curvus 525.92]
 gi|112803502|gb|EAU00846.1| radical SAM domain protein [Campylobacter curvus 525.92]
          Length = 294

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 7/192 (3%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C+    V    +  E  I+++L ++  +        +  I+  G  P  +  
Sbjct: 25  CSHNKCTFCNMYQGVPFRVLPNEQ-IEAYLRQIAQIYARVQN--LDRIYLVGADPFALSA 81

Query: 87  QNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  I + I      + +        N +S      +  + A +N + +GV+S ++ +L
Sbjct: 82  TRLTKIAELIKNYLPNIKTITMYARVDNIASKSDEALKMLKVADINDLYVGVESGDDDAL 141

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLS 203
           + L + ++A +               +  L+             +   +         + 
Sbjct: 142 KALNKGYDAQQIKTQCLRLNEAGIAHNDLLMLGTGGAKRGEEVAKATAKLQNQIRPGKIL 201

Query: 204 LYQLTIEKGTLF 215
           L  ++  + T  
Sbjct: 202 LNTMSAFEDTKL 213


>gi|39998295|ref|NP_954246.1| MiaB-like tRNA modifying enzyme YliG [Geobacter sulfurreducens PCA]
 gi|81701038|sp|Q747R0|RIMO_GEOSL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|39985241|gb|AAR36596.1| MiaB-like tRNA modifying enzyme YliG [Geobacter sulfurreducens PCA]
 gi|298507231|gb|ADI85954.1| ribosomal protein S12 methylthiotransferase [Geobacter
           sulfurreducens KN400]
          Length = 447

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 24/236 (10%)

Query: 1   MKYLSA----YENNMTGQGSNS-LGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           ++Y+      ++ ++T   S+     Y+     C   C YC            +   ++S
Sbjct: 127 LRYIGDPNFVFDESLTRLNSSPAYTAYLKIAEGCSNCCSYC---VIPSLRGAFRSRPLES 183

Query: 55  FLTEMQWMRQLTGPRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            L E + +    G R I+ I      +G   P     + +   L  I     +       
Sbjct: 184 VLAEARSLVA-GGAREINLIAQDITTYGRDLPGAPSLETLIRELAAIDGLAWIR-----L 237

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + A P  +     Q  +        + L +Q + +  L+ + R     +    +   R  
Sbjct: 238 LYAYPDGITDGLIQTIKNEPKVCKYLDLPIQHISDPILKRMNRRSTEPQIRELVARLREE 297

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            P ++    LI   P +T   +   L        D L ++  + E+GT   +M   
Sbjct: 298 IPDIALRTSLIVGFPGETEEDFRTLLHFVEEAQFDRLGVFCYSREEGTPAAEMPDQ 353


>gi|329957182|ref|ZP_08297749.1| hypothetical protein HMPREF9445_02625 [Bacteroides clarus YIT
           12056]
 gi|328523450|gb|EGF50549.1| hypothetical protein HMPREF9445_02625 [Bacteroides clarus YIT
           12056]
          Length = 69

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 332 MMGLRLREGISVKDWEMLAGRNLDIEC---ERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           M  +R + G+S+ D E   G+ L   C    R     G +E ++ S L  T++G+ + DS
Sbjct: 1   MTSIRTKRGLSLNDLEREFGKELWQYCMNMARPHLDSGKLE-IRDSHLCLTRKGIFVSDS 59

Query: 389 VIANLA 394
           ++++L 
Sbjct: 60  IMSDLM 65


>gi|301060852|ref|ZP_07201662.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300445040|gb|EFK08995.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 279

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 80/243 (32%), Gaps = 21/243 (8%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQN 88
           +C +C+F    +  ++     +   + E++ +    G R I      F  G         
Sbjct: 1   RCAFCNF---TKDRRLMFIKRLDRLVEELKIVSAR-GVRFIRFTDDNFRHGK-------- 48

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
              + D   +    + +V+       S++E  +F+  R +G   + LG++S + Q L  +
Sbjct: 49  -GDLNDFSRRIIQENISVKWMTMVRASALERVDFELLRASGCIEVLLGLESADPQLLANM 107

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VD-----HL 202
            +N   +     +    ++   +S   I+  P +T    +            +       
Sbjct: 108 NKNATPALYARVVEQLMSVGIDVSCYFIFGFPGETAETVKKTRNFIRRIEFPELPGTLSW 167

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           +L+  ++   +  Y+        L           +T    + H    +    HS     
Sbjct: 168 ALFPFSVAPLSPVYQPEMRRKYGLNGYMDQWAHDTMTSKEVTGHIERVFNALEHSCPIYR 227

Query: 263 SLH 265
           + H
Sbjct: 228 NDH 230


>gi|260773261|ref|ZP_05882177.1| tRNA-i(6)A37 methylthiotransferase [Vibrio metschnikovii CIP 69.14]
 gi|260612400|gb|EEX37603.1| tRNA-i(6)A37 methylthiotransferase [Vibrio metschnikovii CIP 69.14]
          Length = 474

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 75/234 (32%), Gaps = 24/234 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC                +   L E+  +    G R ++ +      + G    
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLYEIAQLAAQ-GVREVNLLGQNVNAYRGPMHD 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            ++     +  ++  I        +      ++P     +    Y      V+ + L VQ
Sbjct: 213 GTICSFAELLRLVASIDGI-----DRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H A E  + I   R   P +  S D I   P ++   ++  ++    
Sbjct: 268 SGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGESDNDFQATMKLIRD 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              D    +  +   GT       D    +  E     LY L Q I S    ++
Sbjct: 328 VDFDMSFSFIFSPRPGTPAA----DYPCDVSEETKKERLYELQQQINSQAMRYS 377


>gi|256845401|ref|ZP_05550859.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|256718960|gb|EEU32515.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
          Length = 304

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 80/239 (33%), Gaps = 13/239 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++  Q    +++ + +          +F   T +  +   +  
Sbjct: 43  CIFCSENGSGDFTSGKLKSIHQQIDEQIELVSKKYKGNK-YIAYFQNFTNTYADVNYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I +    +  +   V + I   P  +  +  +   +        I LG+Q++ ++  ++ 
Sbjct: 102 IYEEALSHKNI---VGLAIATRPDCLGNDVLELLNELNKKTFLWIELGLQTINDEVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +       A     ++  +    +I  LPK+    +      + +     L L+ + 
Sbjct: 159 NRAYETKIYEEATKKLNSLNIKFVTHIILGLPKEKNDDYLKTAIFSQNCGTWGLKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           + K T   K+++ G+L + S+           +I         EI  H   G      L
Sbjct: 219 VVKNTPLEKLYQSGNLKVHSKEE---YIEKIVNILENISP---EIVIHRMTGDGDRETL 271


>gi|219666091|ref|YP_002456526.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219536351|gb|ACL18090.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 445

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 88/251 (35%), Gaps = 25/251 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +NS   R ++     +   L +++ +    G R I           L    
Sbjct: 169 CPNRCGFC-YNSC--RNRMYIRRPVTDVLRDIEGL----GTRHI-----------LFIDD 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNN---FQGYRKAGVNRISLGVQSLEEQS 144
           N   +     +        E+   A  ++   +         + G   + +G +S+   S
Sbjct: 211 NFIGVPAYTRELLNHLRGRELKWSAAVTTKIADYPDVLDLMAETGCQSLFIGFESINNSS 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + +++   +    +    +    ++  +++ L       ++  L   +   ++ L+ 
Sbjct: 271 LHGVNKDNQFEKYERIVTAIHSRGIMINASMVFGLDGDEPDVFQRTLDWLVKNKIETLTS 330

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS-NHSFLGAES 263
           + LT   GT  +   K+   +L   +  +  YN    +    G+ A E+   + ++  E 
Sbjct: 331 HILTPYPGTELHGRMKEEGRIL---DHELSRYNTAHVVFQPKGMTAEELYKGYLWIYREF 387

Query: 264 LHNLNYWRYGD 274
               N WR   
Sbjct: 388 YSFPNIWRRRP 398


>gi|302389477|ref|YP_003825298.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
           DSM 16646]
 gi|302200105|gb|ADL07675.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
           DSM 16646]
          Length = 441

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 24/206 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--------IFFGGG 79
           C   C YC            +   ++S + E + +        + +          F GG
Sbjct: 160 CNMFCSYC---IIPYVRGPVRSRTLESIIREAENLAGDGFKEIVLTGIHLGLYGADFKGG 216

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
            P+      +  +++ +++   +      +IEA    +  +  +         +   + +
Sbjct: 217 -PT------LYDVIERLSRIEGIKRIRLSSIEA--MELSDDLIKKLASLDNFCHHFHIPL 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R +  +E    +   R+I P +    D+I   P +T   +E+  +   
Sbjct: 268 QSGSDRILKLMNRRYTTAEFEERLRFIRDIMPDVGITTDVIVGFPGETDEDFEITRKFIE 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
             A   L +++ +  KGT   +M   
Sbjct: 328 RAAFSRLHVFKFSPRKGTPAAEMPDQ 353


>gi|288925880|ref|ZP_06419810.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae D17]
 gi|288337304|gb|EFC75660.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae D17]
          Length = 444

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 11/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C   C YC            +   ++S L E+  +R            ++   G  P+  
Sbjct: 156 CNNFCHYC---IVPFTRGRERSRDVESILKEVCDLRDRGFKEVTLLGQNVNSYGLLPNGK 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            P +       + K       + +     NP  +  +  Q         N I    QS  
Sbjct: 213 RPADGTSFAQLLRKVAETVPEMRVRFTTSNPEDMTDDIVQAVADMPNLCNHIHFPAQSGS 272

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R +   + +  +   + + P      D+      ++   ++  L        
Sbjct: 273 DKVLRLMNRKYTRQQYLDKVATIKRLIPDCGITTDIFVGYHDESEEDYQQTLSLVREVGY 332

Query: 200 DHLSLYQLTIEKGTL 214
           D   +++ +   GT 
Sbjct: 333 DSAFMFKYSERPGTY 347


>gi|257469646|ref|ZP_05633738.1| biotin synthase [Fusobacterium ulcerans ATCC 49185]
 gi|317063882|ref|ZP_07928367.1| biotin synthase [Fusobacterium ulcerans ATCC 49185]
 gi|313689558|gb|EFS26393.1| biotin synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 361

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 11/201 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +R+     E F  S    M+ ++ +      S     G      +  
Sbjct: 60  CIKNCNYCG----IRKGNCKTERFSMSKEEIMKGVKWIYENNYGSLALQSGER----QDD 111

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                ++ I K     SN  + I  +        ++ +  AG +R  L ++S  E+  + 
Sbjct: 112 EFTDFIEDIIKEIKKLSNGRLGITLSLGEQSYETYKRWFDAGAHRYLLRIESTNEELFKK 171

Query: 148 LG---RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L      H        +   RNI  ++   ++  LP QT      ++       +D + +
Sbjct: 172 LHPQDGKHTFEVRKKCLEYLRNIGYQVGTGVMIGLPGQTEEDLVDDILFYRDMKIDMIGM 231

Query: 205 YQLTIEKGTLFYKMHKDGDLV 225
               I K T   +  +   L 
Sbjct: 232 GPYIIHKDTPLGQEWEHIVLP 252


>gi|288941688|ref|YP_003443928.1| radical SAM domain-containing protein [Allochromatium vinosum DSM
           180]
 gi|288897060|gb|ADC62896.1| Radical SAM domain protein [Allochromatium vinosum DSM 180]
          Length = 343

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 72/194 (37%), Gaps = 12/194 (6%)

Query: 28  CVKKCPYCDFNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C ++C YC+      ++Y +  ++ ++     +         R +  +  G       + 
Sbjct: 72  CKQRCNYCNIGCEDTQKYVIPSDDLVE-----IAAFLHHERGRRVLLLQSGENK----DR 122

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +A ++   A+      ++++       ++  + ++  R+AGV+R  L +++       
Sbjct: 123 RFVANVIRACAQIKDRLPDIQLI--GCIGNLSRDQYRAMREAGVDRYLLKIEASNPVLYE 180

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
               +   SE    +     +   +   +I  LP QT      +L+      +D +S   
Sbjct: 181 AAKPHDTWSERRQCLDDLLELGFMVGSGIIVGLPGQTEDDLVGDLRFLSELDLDMVSASV 240

Query: 207 LTIEKGTLFYKMHK 220
                GT++    +
Sbjct: 241 FIPGHGTVYEHEPR 254


>gi|254463246|ref|ZP_05076662.1| MiaB-like tRNA modifying enzyme [Rhodobacterales bacterium
           HTCC2083]
 gi|206679835|gb|EDZ44322.1| MiaB-like tRNA modifying enzyme [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 417

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 92/244 (37%), Gaps = 25/244 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  ++ +++L G      +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIKRLVGKGYNEVVLTGVDLTSWGADL 200

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             +      +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 201 PVEPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDDNLMQAIATEPRLMPHLHLSL 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           Q+ ++  L+ + R H   +AIA    A+ + P M    D+I   P +T T +E  L+   
Sbjct: 256 QAGDDMILKRMKRRHLRDDAIAFCEEAKRLRPDMTYGADIIAGFPTETDTMFENSLKLIE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +  L ++  +   GT   KM      V+  +  A  L N   +   AH      +++
Sbjct: 316 ECDLTWLHVFPYSPRNGTPAAKMPAVNGKVI--KARAAQLRNAGDAKVRAHLSKQIGMTH 373

Query: 256 HSFL 259
           H  +
Sbjct: 374 HILM 377


>gi|332296333|ref|YP_004438256.1| Radical SAM domain protein [Thermodesulfobium narugense DSM 14796]
 gi|332179436|gb|AEE15125.1| Radical SAM domain protein [Thermodesulfobium narugense DSM 14796]
          Length = 334

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 23/211 (10%)

Query: 23  VHWP-FCVKKC--PYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           +H+  +C  +C   YC     N  ++R+++  E         +  +       SI +I  
Sbjct: 43  IHFSNYC--RCDDLYCGLRKSNKEMKRFRMDTE--------TIISLADEIAKNSIKTIVL 92

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
             G       + +  I+  I +   V+    IT+     S +   ++   +AG +R  + 
Sbjct: 93  QSGEDVFYSCKMLCQIIKEIKRLHDVA----ITLSLGERSCDD--YKRLYEAGADRYLMK 146

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            +++ E+    +       + + A+   R I  ++    I  LP QT+     ++     
Sbjct: 147 HETMNEELYEKMRPGRKLKDRLKALEYLREIGFQVGTGNIVGLPGQTIEDLAKDILFFQD 206

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
           +  D +++      K T   K +  GD  L 
Sbjct: 207 FQPDMINIGPFIPHKQTPL-KDYPPGDFDLM 236


>gi|303327687|ref|ZP_07358127.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862048|gb|EFL84982.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 346

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 18/195 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N  + RY + ++  +++          +T       +  G      +
Sbjct: 46  CRRNCRYCGLRAANRQLVRYTLSKDEIMET------ATEAVTAGADTIVLQAGEYA---V 96

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            PQ +A ++D I +   +   V +++   P +        +++AG  R  L  ++ + + 
Sbjct: 97  PPQWLAGVVDAIRR--DLRVPVTLSVGEQPRTAC----ALWKEAGAARFLLKHETADPRL 150

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L   H  +E +A++ + R +        +  LP Q       ++  A    V    +
Sbjct: 151 YARLHPGHTLAERLASLRMLRELGYETGSGFMVGLPGQKPESLADDILLARELRVSMCGV 210

Query: 205 YQLTIEKGTLFYKMH 219
                +  T      
Sbjct: 211 GPFIPQADTPLGTRP 225


>gi|290968565|ref|ZP_06560103.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781218|gb|EFD93808.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 440

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 65/203 (32%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGT------ 80
           C   C YC            +     + + E + + +      + + I  G         
Sbjct: 157 CNNFCTYC---IIPYTRGKLKSRRPDAIVEEAKRLVEAGFKELVLTGIHLGAYGKELAEK 213

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGV 137
           P+L     +  +++                  +   V+ +  +   +A       + + +
Sbjct: 214 PTL--AHILRRLVEETDVLRLRLG------SIDSLEVDDDLIRIINEAEQRICPHLHIPI 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           Q+  +  L+ + R +   E I  +   +   P +  S DLI   P +T   +E  ++   
Sbjct: 266 QAGSDTILKAMNRQYTKQEYIGLLTHLQQHIPNITFSTDLILGFPGETEALFEETMETLR 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
                H+  +  +  +GT    M
Sbjct: 326 QLPYSHIHAFPFSPRQGTPAATM 348


>gi|281425800|ref|ZP_06256713.1| 2-methylthioadenine synthetase [Prevotella oris F0302]
 gi|281400061|gb|EFB30892.1| 2-methylthioadenine synthetase [Prevotella oris F0302]
          Length = 446

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 83/254 (32%), Gaps = 17/254 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I S + + +      G   + + +  G    +    
Sbjct: 164 CNYFCTYC---TIPYARGFSRNPSIASLVAQAEEAAAEGGKEIVLTGVNIGHFGET--TH 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
           +    ++  + K   +      ++E  P  ++ +      +  A +    + +QS  +  
Sbjct: 219 EKFIDLVKALDKVEGIKRFRISSLE--PDLIDDDLIAFCAESRAFMPHFHIPLQSGSDAV 276

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++ +     I L + + P   +  D++     +    +E   Q      V  L
Sbjct: 277 LKLMHRRYDTALFAHKIELIKKLMPDAFIGVDVMVGSRGEKPEYFEDCYQFLAHLPVTQL 336

Query: 203 SLYQLTIEKGTLFYKMHK---DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++  +   GT    +     + D  L S+ +       TQ           E+      
Sbjct: 337 HVFPYSERPGTSALSIPYVVEEKDKKLRSKRLLALSDTKTQDFYQQFIGTEREVLFEKAP 396

Query: 260 GAESLH--NLNYWR 271
             +++H    NY R
Sbjct: 397 HGKAMHGFTDNYIR 410


>gi|224045698|ref|XP_002191115.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           [Taeniopygia guttata]
          Length = 582

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        E  +       Q         S  +  +G    + + 
Sbjct: 212 CLNACTYCK-TKHARGDLASYPIEELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 269

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 270 PKLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 323

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 324 SDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDIICGFPGETDEDFQETMKLVELYR 383

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
              L + Q     GT   KM +
Sbjct: 384 FPSLFINQFYPRPGTPAAKMPQ 405


>gi|198274636|ref|ZP_03207168.1| hypothetical protein BACPLE_00788 [Bacteroides plebeius DSM 17135]
 gi|198272083|gb|EDY96352.1| hypothetical protein BACPLE_00788 [Bacteroides plebeius DSM 17135]
          Length = 433

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 8/219 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       ++       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGKHVSRPMEEILDEVRLLVSEGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ +A    V         A P+    + F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIEQMAHIPGVEWIRLHY--AYPAHFPEDLFRVMRENDNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+   +E    I   R   P +     L+   P +T   +E  ++   +   D + 
Sbjct: 262 QKMRRHVTKAETYQLIEKFRKEVPGIHLRTTLMVGHPGETEQDFEELMEFVRTARFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  + E+GT   K +KD       +     L  L Q I
Sbjct: 322 AFAYSEEEGTYSAKHYKDEIPQEVKQQRLDKLMELQQEI 360


>gi|167767638|ref|ZP_02439691.1| hypothetical protein CLOSS21_02171 [Clostridium sp. SS2/1]
 gi|167710655|gb|EDS21234.1| hypothetical protein CLOSS21_02171 [Clostridium sp. SS2/1]
 gi|291560774|emb|CBL39574.1| radical SAM protein, TIGR01212 family [butyrate-producing bacterium
           SSC/2]
          Length = 305

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 70/228 (30%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF S        Q          ++ + +          +F   T +   
Sbjct: 46  CIFCSEGGSGDFASSAALSVTDQ------ITAGIEMVSRKIENGK-YIAYFQAFTNTYGP 98

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +  +      +  +   V + I   P  +     +   +    +   + LG+Q++ E
Sbjct: 99  IEKLEALYMEAINDPRI---VALAIGTRPDCLPAEVLELLNQLNKIKPVFVELGLQTIHE 155

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++  F+ R +  S    A+     I       LI  LP +T       ++      +  +
Sbjct: 156 ETASFIRRGYPLSCFDEAVMNLHKIGVLTVVHLILGLPGETDDMMLESVRYLNHLPIHGV 215

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               L I K T     ++D    + +    VDL        S   +  
Sbjct: 216 KFSMLHILKNTDLADHYEDHPFDVFTLESYVDLILKCIENLSPEIVIH 263


>gi|58698340|ref|ZP_00373255.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535130|gb|EAL59214.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 427

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 73/232 (31%), Gaps = 23/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQ-------LTGPRSISSIFFGGG 79
           C K C +C                +     E ++ +         L    +       G 
Sbjct: 143 CDKFCTFC---VVPYTRGAEYSRPVNEIFREALKLVANGANEINLLGQNVNAYHGECEGE 199

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                   ++  ++  IAK   +      T  ++P  +  + +  + +    +  + L V
Sbjct: 200 V------WDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLAHAEEPKLMPFVHLPV 251

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R H A E +  I   R + P +  S D I   P +T   +E  ++   
Sbjct: 252 QSGSNKILHAMNRKHTAEEYLEIIDRFRKLKPEIEFSSDFIVGFPGETEKDFEETMKLVE 311

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                    ++ +   GT   +        + +E +      +++     + 
Sbjct: 312 KVRYAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQKLISKQQLEFNQ 363


>gi|291538907|emb|CBL12018.1| SSU ribosomal protein S12P methylthiotransferase [Roseburia
           intestinalis XB6B4]
          Length = 444

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K+C YC       ++ S      + Q    + +   E+  + Q T    +        
Sbjct: 158 CNKRCTYCIIPYIRGNYRSVPMEDLIEQAKELVAAGAKELILVAQETTLYGVD------- 210

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   +++  +LD + K   +       +   P  +         +     + + + +
Sbjct: 211 ---LYGEKSLHRLLDELNKIEDLFWIR--IMYCYPEEIYEGLIDAMIRNQKVCHYLDIPI 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  + ++ +  I   R   P ++    LI   P +T    E  +Q   
Sbjct: 266 QHANDTILKRMGRRTSNADLVKIITHLRERIPDITLRTTLICGFPGETQEMHEELMQFIN 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L  +  + E+GT   +     D  L  ++   D+  L + I
Sbjct: 326 DMEFDRLGAFTYSPEEGTPAAEFTDQVDENL-KKDWQADVMELQEEI 371


>gi|253702143|ref|YP_003023332.1| radical SAM protein [Geobacter sp. M21]
 gi|251776993|gb|ACT19574.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 474

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 72/235 (30%), Gaps = 20/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      R+    ++            +  L               P+  +  
Sbjct: 207 CGHDCSFCSQQKFWRKQWRPRDP-----SKVADEIAHLHEAYGADVFLLTDEHPTR-DRG 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               +LD           + + +E     V  + + F  YRKAGV  +S+G++  E+Q +
Sbjct: 261 RFEKLLDL---LIDKGLPIHLILETRVDDVIRDRDIFWKYRKAGVAHVSIGIEGAEQQRV 317

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             LG+  +   A  A+ +            I   P +T    +  LQRA     D+ + +
Sbjct: 318 DALGKGISIDAAREALEIIHEHGIVSEASFILGFPDETHASVQATLQRAKLCNPDNANFF 377

Query: 206 QLTIEKGTLFYKMHKD---------GDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            L        Y+ ++           + + P            +   +      Y
Sbjct: 378 ALAPWPYGESYREYRPRIRETGYSKYNFIDPVLEPEAMTLAELRGALAECYRKFY 432


>gi|110678170|ref|YP_681177.1| MiaB-like tRNA modifying enzyme [Roseobacter denitrificans OCh 114]
 gi|109454286|gb|ABG30491.1| MiaB-like tRNA modifying enzyme, hypothetical [Roseobacter
           denitrificans OCh 114]
          Length = 417

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 23/207 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVDQIKRLVDKGFNEVVLTGVDLTSWGADL 200

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             Q      +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 201 PAQPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQAIATEHRLMPHLHLSL 255

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   ++  L    
Sbjct: 256 QHGDDMILKRMKRRHLRDDAIRFAQDARRLRPDMTFGADIIVGFPTETEAMFDNSLALVE 315

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDG 222
              +  L ++  +   GT   +M    
Sbjct: 316 ECDLTWLHVFPYSARPGTPAARMPAVH 342


>gi|218132363|ref|ZP_03461167.1| hypothetical protein BACPEC_00222 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992701|gb|EEC58703.1| hypothetical protein BACPEC_00222 [Bacteroides pectinophilus ATCC
           43243]
          Length = 421

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 14/192 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC F    R  K        +   E+  + ++   R        GG P++    
Sbjct: 174 CTYQCGYCGF----RNRKGVAILQKDAIHEEIINLGKIDAKRVFIVDANLGGIPAI---- 225

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I    AK    + NV+I     P  ++        K+ +  +  G+Q++ E   R+
Sbjct: 226 -GKFIFSEFAKY---APNVKIIGYLRPEFLDDEYLAILEKSNIEELRFGIQTINENVPRW 281

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
           + RN++ +     +   +++      +L+  LP       +   +  +       L  Y+
Sbjct: 282 I-RNNDITAVKTMLPKLKDVGVFWRAELMVGLPGDDFKALKESFRFVIDEIQPSLLFAYR 340

Query: 207 LTIEKGTLFYKM 218
           LT+  GT   ++
Sbjct: 341 LTVLHGTEVEQL 352


>gi|332358320|gb|EGJ36146.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK355]
          Length = 315

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +         +        + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLAELSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHDMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|295687475|ref|YP_003591168.1| MiaB family RNA modification enzyme [Caulobacter segnis ATCC 21756]
 gi|295429378|gb|ADG08550.1| RNA modification enzyme, MiaB family [Caulobacter segnis ATCC
           21756]
          Length = 448

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 23/206 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C +C                +   + E + +    G R ++    ++    G  S 
Sbjct: 165 CDKFCTFC---VVPYTRGGEWSRPVNDIVEEAKRLADQ-GVREVTLLGQNVNAYDGDGST 220

Query: 84  IEP--QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           +    + +A I       +T          ++P  +  +  + + +    +  + L VQ+
Sbjct: 221 LAKLVRQLARIDGLDRIRYT---------TSHPRDMGDDLIEAHGELPELMPYLHLPVQA 271

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   +  I   R   P ++   D I   P +    +E  L      
Sbjct: 272 GGDRILKAMNRDHTAESYVRLIERIRAARPDIAMSGDFIVGFPGERDGDFEKTLDLVREV 331

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  ++ +   GT    M    +
Sbjct: 332 GFASAFSFKYSRRPGTPASAMPGQVE 357


>gi|317490536|ref|ZP_07949013.1| MiaB family RNA modification enzyme [Eggerthella sp. 1_3_56FAA]
 gi|316910351|gb|EFV31983.1| MiaB family RNA modification enzyme [Eggerthella sp. 1_3_56FAA]
          Length = 355

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT------P 81
           C   C YC    HV R +               + R       ++ I  G         P
Sbjct: 145 CDNACTYC--IVHVARGRATSRPADDVVRECAAYARAGAREIVLTGINLGSYCDGGRRDP 202

Query: 82  SLIEPQNIALIL---DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISL 135
           S I    +   L            +          P  V+         A       + L
Sbjct: 203 SAIRLAALLRRLLDETADLHAPGEAPARFRVSSIEPRDVDDALVDLLASADGRVCRHLHL 262

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +Q+   + LR + R ++A   +A +       P++  S D+I   P +T  +++  L  
Sbjct: 263 PLQAGSSKVLREMARPYDAERFVALVERLYRRIPQLALSTDIIAGFPGETDAEFQETLDV 322

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A +     +  +  +   GT     
Sbjct: 323 ARACRFAKIHAFPYSPRAGTPAAAR 347


>gi|291561901|emb|CBL40704.1| Fe-S oxidoreductase [butyrate-producing bacterium SS3/4]
          Length = 617

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 3/120 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E +    +    +   K   G+ ++ +GVQS    +++ + R+ +  +   A+    
Sbjct: 263 FHFEVSADIFDEEELELIGKMRPGLIQLEIGVQSTNPDTIKEIHRHMDLVKLKQAVDRVY 322

Query: 166 NI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +        DLI  LP +    +            D L +  L + KG+   +     DL
Sbjct: 323 DYRNTHQHLDLIAGLPYENYESFMRSFDDVYRMRPDQLQMGFLKVLKGSYMEEQVAAYDL 382


>gi|226320345|ref|ZP_03795914.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 29805]
 gi|226234208|gb|EEH32920.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Borrelia burgdorferi 29805]
          Length = 161

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 19  LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           L +Y++  FC K     DF+                 L E++    L G   I +++   
Sbjct: 11  LSLYINLSFCCK-----DFSIF------------NRILEELKCHLILLGHPIIKTLYIKH 53

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L    N+  I   ++K   +    E T+E  P  V+   F    +  + RI+L VQ
Sbjct: 54  VDFCLSRQDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFNLLDEFCITRINLNVQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAA-IHLARNIFPRMSFDLIYALPKQ 182
           S   +  + +G    + E +   I+  R     ++ D+   +P Q
Sbjct: 114 SFSLEFRKIVGIPEISYEKLNILINNIRKFPFDLNIDMTVNMPLQ 158


>gi|171321297|ref|ZP_02910259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
           MEX-5]
 gi|171093424|gb|EDT38607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
           MEX-5]
          Length = 457

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K C YC                +   LTE+  +    G R ++    ++    G  + 
Sbjct: 157 CSKYCSYC---VVPYTRGDEVSRPLDDVLTEVAGLADQ-GVREVTLLGQNVNAYRGALTA 212

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + A +++ +A    +      T  ++P          Y K    V+ + L VQ 
Sbjct: 213 GSTEIADFATLIEYVADIPGIERIRYTT--SHPKEFTQRLIDTYAKVPKLVSHLHLPVQH 270

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R +   E  + I    A      +S D+I   P +T   ++  +      
Sbjct: 271 GSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEADFDKMMALVHEM 330

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
           + D    +  +   GT    +H
Sbjct: 331 SYDTSFSFIYSPRPGTPAANLH 352


>gi|86143888|ref|ZP_01062256.1| hypothetical protein MED217_03540 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829595|gb|EAQ48058.1| hypothetical protein MED217_03540 [Leeuwenhoekiella blandensis
           MED217]
          Length = 481

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 4/134 (2%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + ++  +   K       I L VQS  ++ L+ + R H   E    I   R I P
Sbjct: 273 SNPQDMTLDVIRTMAKYPNICKYIHLPVQSGSDRILKEMNRLHTRQEYFELIDNIREIMP 332

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
              +S D+I   P +T    +  L        D   ++  +   GTL  +  +D   +  
Sbjct: 333 DCAISQDMITGFPTETEEDHQDTLSLMEYVKYDFGFMFAYSERPGTLAARKLEDDIPLDV 392

Query: 228 SENVAVDLYNLTQS 241
            +    ++  L Q 
Sbjct: 393 KKRRLAEVIALQQE 406


>gi|269215587|ref|ZP_06159441.1| MiaB tRNA modifying enzyme-like protein [Slackia exigua ATCC
           700122]
 gi|269131074|gb|EEZ62149.1| MiaB tRNA modifying enzyme-like protein [Slackia exigua ATCC
           700122]
          Length = 446

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C +C       RY+              I   + E+  + Q TG            
Sbjct: 162 CDHFCSFCSIPYIRGRYRSFTYERIREAVARQISYGVREITLIAQDTGRWGCD------- 214

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   + +A ++D +A     +      +   P  V                 + + V
Sbjct: 215 ---LEGDRTLAWLIDALAS--EFADTWFRVMYLEPEGVTDELLDVMASRPNVCRYLDIPV 269

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRAL 195
           Q   E+ L  + R+ +A   +     AR     ++    +I   P +T   +   L    
Sbjct: 270 QHASERVLVSMRRSGDARRFLDLFAHARERIEGIAMRTTVIAGFPGETDEDFSKLLDFLE 329

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
              +D++ ++  + E GT   +M    D
Sbjct: 330 QADLDYVGVFPYSREDGTRAARMEGQID 357


>gi|225631339|ref|ZP_03788011.1| tRNA-i(6)A37 modification enzyme MiaB [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590961|gb|EEH12171.1| tRNA-i(6)A37 modification enzyme MiaB [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 439

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 74/231 (32%), Gaps = 21/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C K C +C       R         + F   ++ +         L    +       G  
Sbjct: 155 CDKFCTFC--VVPYTRGAEYSRPVNEIFHEALKLVANGANEINLLGQNVNAYHGECEGEV 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                  ++  ++  IAK   +      T  ++P  +  + +  + +    +  + L VQ
Sbjct: 213 ------WDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLAHAEEPKLMPFVHLPVQ 264

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S   + L  + R H A E +  I   R + P +  S D I   P +T   +E  ++    
Sbjct: 265 SGSNKILHAMNRKHTAEEYLEIIDRFRKLKPEIEFSSDFIVGFPGETEKDFEETMKLVEK 324

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                   ++ +   GT   +        + +E +      +++     + 
Sbjct: 325 VRYAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQKLISKQQLEFNQ 375


>gi|116073345|ref|ZP_01470607.1| hypothetical protein RS9916_32882 [Synechococcus sp. RS9916]
 gi|116068650|gb|EAU74402.1| hypothetical protein RS9916_32882 [Synechococcus sp. RS9916]
          Length = 473

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 79/259 (30%), Gaps = 22/259 (8%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +++  +V+  + C ++C YC   S   + +      I+  +  +      
Sbjct: 156 LEDLTTARRDSAICAWVNVIYGCNERCTYCVVPSVRGKEQSRMPEAIKLEMEGLAAQ--- 212

Query: 66  TGPRSISSI-----FFGGGTPSLIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
            G + I+ +      +G   P +    +    + D +     V     I     +P    
Sbjct: 213 -GFKEITLLGQNIDAYGRDLPGITPEGRRQHTLTDLLHFVHDVDGVERIRFATSHPRYFT 271

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFD 174
                             +  QS +   LR + R +        I   R   P   +S D
Sbjct: 272 ERLIDACADLPKLCEHFHIPFQSGDNDVLRSMARGYTVERYRRIIDRIRERMPDASLSAD 331

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +I A P +T  Q+   L        D ++    +    T       D D  LP E     
Sbjct: 332 VIVAFPGETDAQYRRTLDLIEEIGFDQVNTAAYSPRPNTPAA----DWDNQLPEEVKVAR 387

Query: 235 LYNL--TQSITSAHGLHAY 251
           L  +       +      Y
Sbjct: 388 LQEINALVERCARERNARY 406


>gi|262283227|ref|ZP_06060994.1| radical SAM protein [Streptococcus sp. 2_1_36FAA]
 gi|262261479|gb|EEY80178.1| radical SAM protein [Streptococcus sp. 2_1_36FAA]
          Length = 312

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 99  IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 158

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 159 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 219 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 263


>gi|189499918|ref|YP_001959388.1| MiaB-like tRNA modifying enzyme YliG [Chlorobium phaeobacteroides
           BS1]
 gi|238065323|sp|B3EPX5|RIMO_CHLPB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|189495359|gb|ACE03907.1| MiaB-like tRNA modifying enzyme YliG [Chlorobium phaeobacteroides
           BS1]
          Length = 442

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 69/193 (35%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C       RYK      ++  L   +  R         ++     TP  ++  
Sbjct: 153 CSRTCSFCAIPKMRGRYK---SESMEDLLQ--EATRLKAKGVKELNLIAQDITPYGLDLY 207

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
             + + D + +   ++ +    + A P    +        R+   + + + VQ + ++ L
Sbjct: 208 GTSRLNDLMRELSDLNFDWIRLLYAYPLDFPLEVIDTMRERENICDYLDMPVQHICDRIL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R  +    I  +   R   P +     +I   P +T  ++E  LQ    +  D L 
Sbjct: 268 ASMKRGIDKQGTIGLLESIRKRNPNIRLRTTMIVGYPGETRAEFEELLQFVREFRFDRLG 327

Query: 204 LYQLTIEKGTLFY 216
            +  + E+ T  Y
Sbjct: 328 CFPYSHEEHTAAY 340


>gi|188586121|ref|YP_001917666.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229890572|sp|B2A3X6|MIAB_NATTJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|179350808|gb|ACB85078.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 451

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 43/118 (36%), Gaps = 4/118 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
           + ++P   +       +++        L VQ+   + L+ +GR +     +  ++   A 
Sbjct: 243 MTSHPKDFDKELITTLKESNKICEHFHLPVQAGSNKILKKMGRGYTREHYVDIVNDIRAE 302

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                ++ D+I   P +    ++  L    +   D    +  +   GT   +M +  D
Sbjct: 303 LPNASITTDIIVGYPGEEEEDFQETLDLVQNVKFDSAFTFVYSKRSGTPAAEMAEQVD 360


>gi|330998446|ref|ZP_08322270.1| radical SAM domain protein [Paraprevotella xylaniphila YIT 11841]
 gi|329568552|gb|EGG50357.1| radical SAM domain protein [Paraprevotella xylaniphila YIT 11841]
          Length = 486

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 8/192 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C +        + +    ++ + E +++ +      +  +     T ++    
Sbjct: 218 CPFHCNFCVYP-QTMHGHIFRARSAENVVNEFEYIAENFPD--VKEVVIEDDTFTV---- 270

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           N   +L+          N  +    N   +++       +KAG   I  G++S  +Q L 
Sbjct: 271 NKKRVLEICNLLINKGLNKRLKWLCNARVNLDYETMCAMKKAGCRLIIPGIESGSQQILD 330

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +    +  A+     +    +     +T       L  AL    D    + 
Sbjct: 331 NIKKGTKVEQFYRYVSDAKKAGLLIHACYMVGNCGETRETMNETLNLALKLNTDTAQFFP 390

Query: 207 LTIEKGTLFYKM 218
           L    GT  Y  
Sbjct: 391 LIPYPGTEAYTW 402


>gi|304440470|ref|ZP_07400359.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371222|gb|EFM24839.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 476

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P          YR      N + L VQ+   + LR + R++   E I  I + + I
Sbjct: 271 MTSHPRDFSKELAYAYRDLDKLKNFLHLPVQAGSSKVLRDMNRHYTKEEYIRKIDMVKEI 330

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +  S DL+   P +T   ++  L        D    +  ++ +GT  Y+M
Sbjct: 331 VPEIALSTDLMVGFPTETEEDFKDTLDLCKYVEYDTSFTFIYSMREGTKAYEM 383


>gi|302868543|ref|YP_003837180.1| radical SAM domain-containing protein [Micromonospora aurantiaca
           ATCC 27029]
 gi|302571402|gb|ADL47604.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029]
          Length = 457

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 71/198 (35%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIE 85
           C  +C +C +N+        ++  +   + ++  + Q  G  + +     FGG   +  E
Sbjct: 185 CRSRCTFCAYNA-DLPGGGWRDLPMAQVVDDIAHLHQAIGATTFAFSDSDFGG---TRRE 240

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               A  L    +   ++  +   I     +++ +       AGV  + +GV+S    +L
Sbjct: 241 CARRAAELRDRLRAAGLAGTLTFAISVRAETLDPHTVGVLADAGVRTMLIGVESFNPDTL 300

Query: 146 RFL-GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA----VD 200
             + G+  + +     +  A +         I   P QT+     EL     +       
Sbjct: 301 HRIYGKRQDLTHLREVVAAADDAAVTTVASYILWHPWQTLDGLRTELDALDRFGRHRIPH 360

Query: 201 HLSLYQLTIEKGTLFYKM 218
            ++  +L +  GT+  + 
Sbjct: 361 FMARSRLEVIPGTVIERQ 378


>gi|146299610|ref|YP_001194201.1| RNA modification protein [Flavobacterium johnsoniae UW101]
 gi|229890535|sp|A5FIU2|MIAB_FLAJ1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146154028|gb|ABQ04882.1| RNA modification enzyme, MiaB family [Flavobacterium johnsoniae
           UW101]
          Length = 481

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 74/243 (30%), Gaps = 25/243 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C   C +C   F     R +  Q    +      +  +++    +++ S  + GG    +
Sbjct: 178 CDNMCTFCVVPFTRGRERSREPQSIMAEIQDLWSKGFKEITLLGQNVDSYLWYGGG---L 234

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-----------EANPSSVEVNNFQGYRKAG--VN 131
           +   +       A        +E+              +NP  +  +      K      
Sbjct: 235 KKDFVNASEMQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESILHVMAKYPNICK 294

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R H+  E +A I    A      +S D+I   P +T    + 
Sbjct: 295 HIHLPVQSGSNRILKEMNRLHSREEYMALIDKIRAIVPDASISQDMIAGFPTETEQDHQD 354

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            +        +   +Y  +   GTL  +  KD       E            +   H   
Sbjct: 355 TMSLMEYVKYNFGYMYSYSERPGTLAGRKMKDD----VEEETKARRLQEIVDLQQKHAWF 410

Query: 250 AYE 252
             E
Sbjct: 411 RSE 413


>gi|189461331|ref|ZP_03010116.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136]
 gi|189431860|gb|EDV00845.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136]
          Length = 432

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 22/242 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       ++       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGKHVSRPMEEILDEVRLLVSEGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ +A+   V         A P+      F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIERMAEIPGVKWIRLHY--AYPAHFPKELFRVMREHDNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+    E    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 SKMRRHVTKEETYQLIEEFRKEVPGIHLRTTLMVGHPGETDQDFEELKEFVRKARFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN---HSFLG 260
            +  + E+GT   K +KD               ++ Q           EISN   H+ +G
Sbjct: 322 AFAYSEEEGTYSAKHYKDD-----------IPQDVKQKRLDELMEIQQEISNELSHNKIG 370

Query: 261 AE 262
            E
Sbjct: 371 KE 372


>gi|125718570|ref|YP_001035703.1| hypothetical protein SSA_1770 [Streptococcus sanguinis SK36]
 gi|125498487|gb|ABN45153.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
 gi|327462946|gb|EGF09267.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis SK1]
 gi|332362265|gb|EGJ40065.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK1056]
 gi|332367421|gb|EGJ45154.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK1059]
          Length = 315

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|319938709|ref|ZP_08013073.1| radical SAM protein [Streptococcus anginosus 1_2_62CV]
 gi|319811759|gb|EFW08025.1| radical SAM protein [Streptococcus anginosus 1_2_62CV]
          Length = 314

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 45  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVKKYLVYFQNFTNT---HDKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E + + +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAELSERMHVTVELGLQTTYEATSQLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVQRLRKFPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLLSQDEYVSIVCDQLEIIPKHIVIH 265


>gi|170290976|ref|YP_001737792.1| radical SAM domain-containing protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175056|gb|ACB08109.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 501

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 20/209 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGG--GTPSLIE 85
           C YC   S    Y   +    +S L E++ +      R +      + +G    +  L  
Sbjct: 217 CGYC---SIPSLYGPPKSRSEESILREIEELAIAGVRRFVLSGADFLEYGRDLISTPLTN 273

Query: 86  PQN----IALILDGIAKNWTVSSNVEITIEAN---PSSVEVNNFQGYRKA-GVNRISLGV 137
           P++    +  I   ++K   ++       E     P  V         K      I +GV
Sbjct: 274 PRDPGPNLDAIDSLLSKVKGLAERYSFFFEIENVKPCLVNEEVAYTLSKYLKGTPIHIGV 333

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR---A 194
           ++ +    R +GR  +  +++ AI + +    R     I++LP Q+    +  L+     
Sbjct: 334 ETGDPDHARLIGRPCSPEDSLRAIKILKKYGLRPYAYFIHSLPGQSERVAKKTLEMMRAV 393

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                + +++Y+     GT F       D
Sbjct: 394 YDAGAEKITIYRFKPLPGTAFQDFEVKVD 422


>gi|91794426|ref|YP_564077.1| radical SAM family protein [Shewanella denitrificans OS217]
 gi|91716428|gb|ABE56354.1| Radical SAM [Shewanella denitrificans OS217]
          Length = 292

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 84/241 (34%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD   + +  K  +   +     ++  +        IS +F   G    +  + +  
Sbjct: 31  CSFCD--MYTQPQKQFRAQKLDKIEQDI--LNAAASGYPISRVFLADGDAMSLPFKRLKE 86

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I + I  +   V+      +  N ++  V   +  R+ G++ + +G +S ++Q L  + +
Sbjct: 87  ICELINTHLPSVTRISSYCLPRNLTNKTVEQLKELREMGLSLLYVGCESGDDQVLTLIEK 146

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQLT 208
             N + ++AA+   +    + S  ++  L     +        +   +   D+LS   ++
Sbjct: 147 GENFASSLAALEKIKQAGMKSSVMILMGLGGVELSEQHALNSARLMNAAQPDYLSTLVVS 206

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +  GT        G  VLP     +    +  S                     S H  N
Sbjct: 207 LPLGTERMDKVFGGKFVLPDTQGLLKEMGILLSHLELE-----------KTIFRSDHASN 255

Query: 269 Y 269
           Y
Sbjct: 256 Y 256


>gi|320160982|ref|YP_004174206.1| hypothetical protein ANT_15780 [Anaerolinea thermophila UNI-1]
 gi|319994835|dbj|BAJ63606.1| hypothetical protein ANT_15780 [Anaerolinea thermophila UNI-1]
          Length = 544

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 76/234 (32%), Gaps = 19/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    HV      +    +  + E+  +++L     I++I       ++    
Sbjct: 280 CTAGCTYC--IKHVSYQYTVRLRSPEKIVEELWVLKKLG----INNIHMYADLFTV-SRD 332

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +             ++ T  +    V+        KAG   IS G++S  EQ LR 
Sbjct: 333 QVVDL---CRLIIDQGLKIKWTCNSRVDYVDEEMLNLMAKAGCWFISWGIESGNEQILRH 389

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +      AI ++ LA+    R     I  LP +T       +  A S  +D    +  
Sbjct: 390 ARKGAYPERAIHSLTLAKKAGIRNWGYFIIGLPGETEETIRQTIDFAKSLPLDLALFHIA 449

Query: 208 TIEKGTLF---------YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               GT F         ++     + V   +   +D  +L           A+ 
Sbjct: 450 APYPGTPFFFEVVREGWFRKGTRWEQVDMDKETVLDYPHLPAERLMYWQRRAFR 503


>gi|315223318|ref|ZP_07865179.1| radical SAM protein family [Streptococcus anginosus F0211]
 gi|315187750|gb|EFU21504.1| radical SAM protein family [Streptococcus anginosus F0211]
          Length = 314

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 45  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVKKYLVYFQNFTNT---HDKVEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E + + +
Sbjct: 102 IRERYEQAINEPGVVGINIGTRPDCLPDETIDYLAELSERMHVTVELGLQTTYEATSQLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+    +  +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYELYVETVQRLRKFPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S++  V +      I   H +  
Sbjct: 222 LHLMTNTRMQRDYHEGRLQLLSQDEYVSIVCDQLEIIPKHIVIH 265


>gi|306827945|ref|ZP_07461212.1| radical SAM protein [Streptococcus pyogenes ATCC 10782]
 gi|304429864|gb|EFM32906.1| radical SAM protein [Streptococcus pyogenes ATCC 10782]
          Length = 306

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNTY---DTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 100 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKDTVRRLRHY-PNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 219 LLHLMTNTRMQRDYHEGRLKL 239


>gi|154494340|ref|ZP_02033660.1| hypothetical protein PARMER_03695 [Parabacteroides merdae ATCC
           43184]
 gi|154085784|gb|EDN84829.1| hypothetical protein PARMER_03695 [Parabacteroides merdae ATCC
           43184]
          Length = 456

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 60/206 (29%), Gaps = 20/206 (9%)

Query: 23  VHWPF-------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           VH          C   C YC            +   I+S L E++ MR            
Sbjct: 160 VHISGFVSIMRGCNNFCTYC---IVPYTRGRERSRDIESILNEIRDMRDKGFK---EVTL 213

Query: 76  FGGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--V 130
            G    S +   E + I+           V         ++P  +         +     
Sbjct: 214 LGQNVNSYLFEKEGEKISFPALLKRVAEEVPEMRVRFTTSHPKDMSDETLHVIAEHDNIC 273

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE 188
             I L  QS   + L+ + R +     +  I   R I P   +S DL      +T   ++
Sbjct: 274 KMIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRILPDCAISTDLFCGFHSETEEDYQ 333

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTL 214
             L        D   L++ +   GT 
Sbjct: 334 ETLSLMREVGYDSAFLFKYSERPGTY 359


>gi|89092053|ref|ZP_01165008.1| hypothetical protein MED92_07796 [Oceanospirillum sp. MED92]
 gi|89083788|gb|EAR63005.1| hypothetical protein MED92_07796 [Oceanospirillum sp. MED92]
          Length = 455

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 79/224 (35%), Gaps = 18/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C K C +C       R +             ++   Q  G R ++ +  G    + +   
Sbjct: 157 CSKYCTFC--VVPYTRGEEVSRPLDDVITECVELAEQ--GVREVNLL--GQNVNAYLGET 210

Query: 85  ---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  ++A ++  +A    +      T  ++P     +  + Y      V+ + L VQS
Sbjct: 211 HDGDTADLAELIRCVAAVEGIDRIRFTT--SHPVEFTDSLIEAYEDVPELVSFLHLPVQS 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A E  + I   R   P +  S D I   P +T T +   ++     
Sbjct: 269 GSDKILMAMKRGHTALEYKSKIRRIRKARPDIEISSDFIIGFPNETDTDFAATMKLIEDI 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             D+   +  +   GT    +  + D     E + +    + Q+
Sbjct: 329 GFDNSYSFIYSRRPGTPASDLPDNIDEETKKERLKILQSRIIQN 372


>gi|318040423|ref|ZP_07972379.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. CB0101]
          Length = 464

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 15/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC   S   + +      I+  +  +       G + I+ +      +G   P 
Sbjct: 170 CNERCTYCVVPSVRGKEQSRLPEAIKLEMEGLAAQ----GFKEITLLGQNIDAYGRDLPG 225

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +    + D +     V     I     +P                      +  Q
Sbjct: 226 ITPEGRRQHTLTDLLQFVHNVEGLERIRFATSHPRYFTERLIDACADLPKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S ++  L+ + R +        I   R   P   +S D+I A P +T  Q+   L     
Sbjct: 286 SGDDDVLKAMARGYTVDRYRRIIERIRERMPDASISADVIVAFPGETDAQYRRTLDLIEE 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD 221
              D ++    +    T        
Sbjct: 346 IGFDQVNTAAYSPRPNTPAADWPDQ 370


>gi|292670089|ref|ZP_06603515.1| tRNA-I(6)A37 thiotransferase [Selenomonas noxia ATCC 43541]
 gi|292648277|gb|EFF66249.1| tRNA-I(6)A37 thiotransferase [Selenomonas noxia ATCC 43541]
          Length = 472

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 74/233 (31%), Gaps = 25/233 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGG------T 80
           C   C +C            +   + +   EM  + +      + + I  G         
Sbjct: 190 CQNFCTFC---IIPYARGPVKSRELSAVAREMHLLTEAGFHEVVLTGIHLGAYGIDLAAR 246

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQ 138
           P+ +       + +   +   + S   + + A+   +      F          + L +Q
Sbjct: 247 PT-LADACRTALGEAKLRRLRLGSLESVELSADLLELIRTEPRFAA-------HLHLPLQ 298

Query: 139 SLEEQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           +  +  LR + R+++    ++ IA +  A      +S D+I   P +T   +   +    
Sbjct: 299 AGSDAVLRAMNRHYDTAAFAQLIADVRRAVPGVA-VSTDIIVGFPGETEEDFAAGMDFVR 357

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           +     + ++  +  +GT       D       +  A  +  L + +   +  
Sbjct: 358 AMGFARMHVFPYSPRRGTP-AAQRADQVPPAVRKERAARMQALAEELAQDYHR 409


>gi|257357707|dbj|BAI23333.1| putative C-methyltransferase [Streptomyces griseus]
          Length = 645

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 73/216 (33%), Gaps = 12/216 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C        +       ++SF    +     L G   + ++F       ++E 
Sbjct: 207 CPYRCSFC-------YWGGATGQRVRSFSRDRLAAELDLFGYHQVPTVFLCDANFGMLEA 259

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQS 144
            +     L  I + +    ++E     N S       +  ++ G  +  +L +Q+L +++
Sbjct: 260 DEEFTEDLLKIHEKYGFPVSLEANWAKNKSQRFHRIVRTLKQYGFKSSFTLALQTLSDEA 319

Query: 145 LRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R     ++                 +LI+  P +T+  +     R     V  ++
Sbjct: 320 LTDMRRRNMKLNQWQDLAEWLAAEGMESFVELIWGSPGETVETFLDGYDRIAE-KVPRIA 378

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +Y L +   T + +  +    V          Y L 
Sbjct: 379 VYPLLLLPNTDYSEKRELHGFVTVRGESDDFEYVLA 414


>gi|229890675|sp|Q0S1P3|MIAB_RHOSR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 505

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 87/273 (31%), Gaps = 24/273 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L A+ + +  +  ++   +V     C   C +C       R K              
Sbjct: 135 LEALEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC--IVPALRGKEVDRRPGDILAEVQ 192

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEAN 113
             + +     ++          S  +P         A +L    +   +          +
Sbjct: 193 ALVNEGVVEVTLLGQNVNAYGVSFADPDQPRDRGAFAALLRACGQIDGLERVRF--TSPH 250

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P+    +  +   +      ++ + +QS  ++ L+ + R++  S  +  I   R   P  
Sbjct: 251 PAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRVLKAMRRSYRKSRFLGIIDKVRTAMPHA 310

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ D+I   P +T   ++  L             +Q +   GT   +M    D  LP  
Sbjct: 311 AITTDIIVGFPGETEEDFQDTLDVVRQARFTSAYTFQYSKRPGTPAAEM----DEQLPKA 366

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            V  + Y    ++     L      N   +GAE
Sbjct: 367 VVQ-ERYERLIALQEQITLEE----NQKLVGAE 394


>gi|229890666|sp|Q5LLM0|MIAB_SILPO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 439

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 76/238 (31%), Gaps = 28/238 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E   + +  G R I+ +      + G  P+
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRILREANELVER-GVREITLLGQNVNAYHGAGPN 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQS 139
                    +   I +   +     I     +P+ +  +  + +      +  + L VQ+
Sbjct: 215 -----GDMTLAGLIWELDKIDGLERIRFTTSHPNDMADDLIEAHGTCAKLMPYLHLPVQA 269

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   +  I   R   P +    D I   P++T   ++  L      
Sbjct: 270 GSDKILKRMNRSHTAESYLRLIERIRAARPDIVMSGDFIVGFPEETEADFQDTLDLVEQV 329

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +   ++ +   GT   +  +             +  +  Q + +    H  EI +
Sbjct: 330 RYGYAYSFKYSTRPGTPAAERAQVDP---------AEADDRLQRLQAVITRHQREIQD 378


>gi|111023729|ref|YP_706701.1| hypothetical protein RHA1_ro06771 [Rhodococcus jostii RHA1]
 gi|110823259|gb|ABG98543.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 552

 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 87/273 (31%), Gaps = 24/273 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L A+ + +  +  ++   +V     C   C +C       R K              
Sbjct: 182 LEALEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC--IVPALRGKEVDRRPGDILAEVQ 239

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEAN 113
             + +     ++          S  +P         A +L    +   +          +
Sbjct: 240 ALVNEGVVEVTLLGQNVNAYGVSFADPDQPRDRGAFAALLRACGQIDGLERVRF--TSPH 297

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P+    +  +   +      ++ + +QS  ++ L+ + R++  S  +  I   R   P  
Sbjct: 298 PAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRVLKAMRRSYRKSRFLGIIDKVRTAMPHA 357

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ D+I   P +T   ++  L             +Q +   GT   +M    D  LP  
Sbjct: 358 AITTDIIVGFPGETEEDFQDTLDVVRQARFTSAYTFQYSKRPGTPAAEM----DEQLPKA 413

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            V  + Y    ++     L      N   +GAE
Sbjct: 414 VVQ-ERYERLIALQEQITLEE----NQKLVGAE 441


>gi|325696335|gb|EGD38226.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK160]
          Length = 315

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  I LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTIELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSVVCDQLEIIPEHIVIH 266


>gi|260437149|ref|ZP_05790965.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
           2876]
 gi|292810461|gb|EFF69666.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
           2876]
          Length = 439

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 66/203 (32%), Gaps = 14/203 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC   S        +   +   + E +++        I     I   G    L 
Sbjct: 153 CDKHCTYC---SIPMIRGAYRSVPMDELVKEAEYLADNGVKELIIVAQEITVYGKD--LY 207

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
             + +  +L  + K   +       +   P  +     +  R  K   + I + +Q   +
Sbjct: 208 GEKKLPELLHRLCKIPGIQWIR--LLYCYPEEITDELIETIRTEKKICHYIDMPIQHASD 265

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  N  E    I   R   P +     LI   P +T    ++ L        D
Sbjct: 266 KILKAMGRRTNNVELRNIISKLRKEIPDICLRTTLITGFPGETEEDHQILLDFIDEMEFD 325

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            L ++  + E+ T    +    D
Sbjct: 326 RLGVFTYSPEEDTKAASLDNQVD 348


>gi|300024986|ref|YP_003757597.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526807|gb|ADJ25276.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 449

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C K C +C                +     E   + +          +++++    G   
Sbjct: 165 CDKFCTFC---VVPYTRGSEYSRSVAKIEAEAHELARAGAKELVLLGQNVNAYHGEGADG 221

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 ++   L  I     +       + ++P  +  +    +      +  + L VQS
Sbjct: 222 RTASLADLIRTLAAIEGVERIRY-----MTSHPRDMSDDLIAAHADVPQLMPFLHLPVQS 276

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R H A+E +  I   R   P +  S D I   P +T    E  +    + 
Sbjct: 277 GSDRILAKMNRKHTAAEYVDLIARIRKARPDIALSSDFIVGFPGETEQDAEDTIALIEAV 336

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 337 GFAQAFSFKYSARPGTP 353


>gi|213584643|ref|ZP_03366469.1| coproporphyrinogen III oxidase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 111

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 315 VVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQ 372
           +     L  ++    F++  L   +G+S+ D++     +   D        RQG+  +  
Sbjct: 19  INHGYLLPPDEMKRRFIIKNLFFWQGLSLSDYQQYFTSDALRDFPDLERFIRQGYCYQ-N 77

Query: 373 FSRLRCTQRGMTMLDSV 389
            SRLR T+ GM + D +
Sbjct: 78  GSRLRLTETGMALSDCL 94


>gi|223938126|ref|ZP_03630023.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [bacterium Ellin514]
 gi|223893170|gb|EEF59634.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [bacterium Ellin514]
          Length = 483

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 15/250 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   +  +K    +  ++   EM   ++L     +   FF   T +     
Sbjct: 205 CPAQCTFCLWPQTIGGHKYRVRSP-ENVAAEMAHAKKLFP--QVEEFFFDDDTFT----A 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N+    +   K  T+         AN   V     +  +  G+    +G +S  +Q L  
Sbjct: 258 NLPRAREIAQKLKTLGMTWSCNSRAN---VNYETIKLMKDCGLRLFLVGYESGNQQILDR 314

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  N  EA       + +   +    I  LP +T    E  ++ A+   V  + +   
Sbjct: 315 IKKGINIEEAKKFTKACKELGVIIHGTFILGLPVETKETIEETIRYAMDLDVFSIQVSLA 374

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS-ITSAHGLHAYEISNHSFLGAESLHN 266
               GT  Y+M +        +   +   +  Q    +  GL   EI    F   E  + 
Sbjct: 375 APYPGTELYEMARQNGWFAKKDKTDIIHDDGIQQSTLAYPGLSKDEI----FESVEKFYR 430

Query: 267 LNYWRYGDYI 276
             Y R    +
Sbjct: 431 RYYLRPKPIL 440


>gi|157737373|ref|YP_001490056.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
 gi|114461634|gb|ABI75082.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri]
 gi|157699227|gb|ABV67387.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
          Length = 422

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 86/255 (33%), Gaps = 23/255 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     +   +    ++ +     ++ +  L        I  G    S  + Q
Sbjct: 150 CDFRCSYC----IIPYVRGDARSYSED--KILEQVTTLASNGFGEFILTGTNVGSYGKKQ 203

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQS 144
           +  +A +L  ++    V      +IE  P  ++    +   +  +   + + +Q   ++ 
Sbjct: 204 HTSLAKLLKKMSLIKGVRRIRMGSIE--PIQIDDEFKEIINEPFMAKHLHIALQHTSKEM 261

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R +     +      R     +  D I   P +T   W+  ++    + + H+  
Sbjct: 262 LKIMNRRNKVLSDLELFEFLRENGYALGTDFIVGHPGETEALWKEAMENLHRFPLTHVHA 321

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           +  +   GT    M           ++A   YN   +I            N      ++L
Sbjct: 322 FTYSKRDGTPSATMKPQIK-----GDIAKVRYNELINIIEQKNY------NFRKENKKTL 370

Query: 265 HNLNYW-RYGDYIGI 278
             L    + G YIG+
Sbjct: 371 EVLVEQEKNGKYIGL 385


>gi|315124891|ref|YP_004066895.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315018613|gb|ADT66706.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
          Length = 439

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L+ + R  N++     ++L ++     +    I   P ++   +E   +    +  D
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSTPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFD 317

Query: 201 HLSLYQLTIEKGTLFYKM 218
            +S++  + E+ T  + M
Sbjct: 318 RVSVFAYSKEEDTAVFDM 335


>gi|94967903|ref|YP_589951.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549953|gb|ABF39877.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 501

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 68/193 (35%), Gaps = 24/193 (12%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC D   + RR+       + + +T +           I+ I           P
Sbjct: 196 CPYACNYCTDMVFYKRRFNALNAERVVAEMTGL------VAKFKIAEIALLDSNF----P 245

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++   +      +        T +A+      +  +  +  R +GV+ +  G +S  E 
Sbjct: 246 VDVKRAVAIARGIYESGVPFRWTFQASTDFLFRMSDDEVKVLRASGVSHMGFGTESTSES 305

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ---------R 193
            L+ +  R+   +E       A     R++F+LI+  P +T        +         +
Sbjct: 306 VLKLMNKRHQRMNEVYETARKADAAGIRVTFNLIFGYPGETENDRAETFRAMSEIAREFQ 365

Query: 194 ALSYAVDHLSLYQ 206
           ++S++ +  + Y 
Sbjct: 366 SVSFSPNIFTPYP 378


>gi|28210972|ref|NP_781916.1| Fe-S oxidoreductase [Clostridium tetani E88]
 gi|75542496|sp|Q895I7|RIMO_CLOTE RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|28203411|gb|AAO35853.1| Fe-S oxidoreductase [Clostridium tetani E88]
          Length = 444

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 64/200 (32%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC       +Y+  +       + ++    +      +  I       +     
Sbjct: 155 CDNFCTYCAIPKIRGKYRSRK-------IEDIIEEAKFLSQNGVKEIIIVAQDTTRYGLD 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +   + +  +L  + +   +       +   P  +     + + +       + + +Q +
Sbjct: 208 IYGEKTLPSLLKQLEEVDGIEWIR--LLYCYPEDITEELIEEFARNKKLCKYVDVPIQHI 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR  N       +   +   P MS    LI   P +    ++        + 
Sbjct: 266 SDSVLKRMGRKGNKQLVTKVLRDIKKRVPEMSIRTSLIVGFPGEMEEDFKELKDFVEEFK 325

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
             +L +++ + E+GT    M
Sbjct: 326 FQNLGVFKYSQEEGTPAATM 345


>gi|317129680|ref|YP_004095962.1| radical SAM protein [Bacillus cellulosilyticus DSM 2522]
 gi|315474628|gb|ADU31231.1| Radical SAM domain protein [Bacillus cellulosilyticus DSM 2522]
          Length = 573

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 4/141 (2%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQSLRFLG 149
           ++            E   E     +     Q   +    GV R  +GVQS  + +   + 
Sbjct: 239 MEMFQFLIENHGGCEFQFEITADIMRPEVLQYLNEHAPPGVFRFEIGVQSTNDLTNDLVK 298

Query: 150 RNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R  N  +    + L +         DLI  LP++    ++       +   + L L  L 
Sbjct: 299 RRQNFKKLARTVTLVKEGGKIDQHLDLIAGLPEENYDSFKKTFNDVFALRPEELQLGFLK 358

Query: 209 IEKGTLFYKMHKDGDLVLPSE 229
           + +GT    M           
Sbjct: 359 MLRGTGMRAMADQYKYKYMDY 379


>gi|167764860|ref|ZP_02436981.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
           43183]
 gi|167697529|gb|EDS14108.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
           43183]
          Length = 440

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGSIASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  +     +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDDVECIERYRISSIE--PNLLTDEIIEFVSRSKRFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   +   S  V  L 
Sbjct: 273 KLMRRRYDTALFASKVKRIKEVMPDAFIGVDVIVGTRGETEEYFEQAYRFIQSLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|153854410|ref|ZP_01995688.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
 gi|149752936|gb|EDM62867.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
          Length = 442

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 10/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +     S L E++ +    G + +        +  +    
Sbjct: 167 CNQFCSYC---IIPFARGRVRSRSRDSVLDEVKTLSA-NGYKEVVLTGIHLSSYGIDCDD 222

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+  ++  I +   +      ++E  P  +     Q   K         L +QS    +L
Sbjct: 223 NLLSLILAIHEVEGIERIRLGSLE--PRIITEEFAQTIAKLPKMCPHFHLSLQSGCNATL 280

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R + A E      L R  F    ++ D+I   P +T  ++                
Sbjct: 281 KRMNRRYTAEEYYEKCQLLRKYFDNPALTTDVIVGFPGETEEEFAESKAFVDKVDFYETH 340

Query: 204 LYQLTIEKGTLFYKM 218
           +++ +  +GT    M
Sbjct: 341 IFKYSRREGTKAAAM 355


>gi|67462443|ref|XP_647883.1| RNA modification enzymes, MiaB-family [Entamoeba histolytica
           HM-1:IMSS]
 gi|56463504|gb|EAL42497.1| RNA modification enzymes, MiaB-family [Entamoeba histolytica
           HM-1:IMSS]
          Length = 438

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC      +  + G  ++ I+  +  +Q  + +      ++    G      ++
Sbjct: 155 CENACSYC----KTKHARGGLRSYPIEELVKRVQQSVDEGVKEIRLTGEDIGAYG---LD 207

Query: 86  P-QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ----GYRKAGVNRISLGVQSL 140
                  +L+ I +     + + I +  NP  +     +      R      + + +QS 
Sbjct: 208 INDTFPHMLERICEVVDGKAMLRIGM-VNPPYIIKYFNEIVNILLRPCCFKFLHIPIQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L  + R +   E     +  R   P +S   D+I   P +T    +  L+    + 
Sbjct: 267 STSVLDAMKRKYTREEFDDVCNRLRIAVPGISIATDIICGFPTETDEDHKKTLECIEKHK 326

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              +++ Q+ I  GT   KM
Sbjct: 327 FPVVNISQMYIRPGTPAAKM 346


>gi|332702416|ref|ZP_08422504.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552565|gb|EGJ49609.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 435

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 81/224 (36%), Gaps = 11/224 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      +       + I + L +M+ +  +   R I +  FG   P     +
Sbjct: 210 CTHACGFCA--IRAQAGGRYLTHSIPAVLRDMRLLGDIPVVRLIDANTFG--DPKH-AAE 264

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I+D       ++     T+  +P          +RKAG+  + +G + L ++ L  
Sbjct: 265 LAQAIIDAGLGKRIIADVRSDTVVRHP-----ELMALWRKAGLLAVIIGFEDLSDEGLAR 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+ +     + A+ +   +  R+  D I A P  +   +E   +      +D   +  L
Sbjct: 320 LGKRNTWRNNVEAVSILHGLGIRIVGDFI-ASPDYSEADFEHLGKTIADLHIDLPMVSVL 378

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           T   GT  Y   ++  ++   +   +    L   +T       Y
Sbjct: 379 TPLPGTPLYNELRERIVIHDLDYYTLTNAVLPTRLTEKTFYETY 422


>gi|210633072|ref|ZP_03297639.1| hypothetical protein COLSTE_01547 [Collinsella stercoris DSM 13279]
 gi|210159226|gb|EEA90197.1| hypothetical protein COLSTE_01547 [Collinsella stercoris DSM 13279]
          Length = 445

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 73/229 (31%), Gaps = 23/229 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C + C +C       RY       I      +  +R+L        +  G      G   
Sbjct: 150 CDRFCSFCAIPYIRGRYHSRSAEDI------IAEVRELVAGGVREIVLIGQDTGIWGTDF 203

Query: 82  S--LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           +  +  P N+A ++  +++    ++     +   P  +        R     +  I + V
Sbjct: 204 TEGVEGPANLAQLMVAVSEAVRPANVWIRVLYLQPEGMTDELIAAIRDTPEVLPYIDIPV 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q    + L+ + R+ +  E         A      +    +   P +T  + +  L    
Sbjct: 264 QHCNARILKAMHRSGSEEELTRLFAKLRAEIPGMVIRTTSLVGFPSETDDEAKQMLAFMD 323

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               D+ S++  + E+GT    M    D     E+V ++       +  
Sbjct: 324 REGFDYTSVFPYSPEEGTRAAAMDGQVD-----EDVKLERTQAAMDLAE 367


>gi|304440349|ref|ZP_07400238.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371101|gb|EFM24718.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 444

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFF----GGGTPS 82
           C   C YC     + + K   +   +++ + E++++ +  G R +  I       G    
Sbjct: 155 CDNFCTYC----IIPKLKGKNRSRKLENIVGEVKYLVE-NGTREVILIAQNTTDYGID-- 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L     +A +L  + K   +       +   P          ++     V    + +Q +
Sbjct: 208 LYGEYRLAKLLHELEKIEDLKWIR--VMYLYPDHFTKELIDEFKNNKKLVKYADIPLQHV 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R  N  +    I   R+    M      I   P +T   +   L+      
Sbjct: 266 SDNVLKRMNRRTNKEDIKNLIKTLRSEIDDMVIRTTFIVGFPGETEEDFMELLEFINFAK 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT---QSITSAHGLHAYEI 253
           +D +  +  + E+GT    +       +  +     +       + + ++      E+
Sbjct: 326 LDRVGAFTYSKEEGTPAANLEGQISEDIKQDRFERIMMEQMGISEELLNSKVGKVLEV 383


>gi|303229023|ref|ZP_07315831.1| iron-only hydrogenase maturation rSAM protein HydE [Veillonella
           atypica ACS-134-V-Col7a]
 gi|302516301|gb|EFL58235.1| iron-only hydrogenase maturation rSAM protein HydE [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 378

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G        
Sbjct: 71  CIKNCNYCG----IRRENDKTERF-DMNREDIIKMAQWAYDHEYGSITLQSGE---RCDD 122

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                +  + ++     +  + I           ++  R+AG +R  L +++  ++    
Sbjct: 123 VFVDYVVDLIRDIKAIGDGSLGITMCVGEQSEEAYRRMREAGASRYLLRIETTNKELYHK 182

Query: 148 LGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 183 IHPRDELHSFETRVECLRRLRRVGFQVGTGVMIGLPGQTEEDLVNDILFYRDMDIDMIGM 242

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 243 GPYVVHHDTPLGQ 255


>gi|118463442|ref|YP_882379.1| biotin synthase [Mycobacterium avium 104]
 gi|254775644|ref|ZP_05217160.1| biotin synthase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|254810732|sp|A0QHJ1|BIOB_MYCA1 RecName: Full=Biotin synthase
 gi|118164729|gb|ABK65626.1| biotin synthase [Mycobacterium avium 104]
          Length = 345

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR  ++     I S +   +   +             G     
Sbjct: 81  CPEDCHFCSQSGLFASPVRSARLD----IPSLVEAAKQTAKSGATEFCIVAAVRG----- 131

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +  +    A    + + VEI I  +   +     +   + GV+R +  +++    
Sbjct: 132 -PDERL--LAQVAAGIEAIRNEVEINIACSLGMLTAEQVEQLAEMGVHRYNHNLETARSF 188

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 189 FPNVVT----THTWEERWDTLSMVRDAGMEVCCGGILGM-GETLEQRAEFAAELAELGPD 243

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 244 EVPLNFLNPRPGTPFGDLEVMP 265


>gi|65322118|ref|ZP_00395077.1| COG1242: Predicted Fe-S oxidoreductase [Bacillus anthracis str.
           A2012]
          Length = 257

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 64/194 (32%), Gaps = 19/194 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF          +++ I  +    + MR         + +F   T +   
Sbjct: 54  CTFCSAAGSGDF------AGDRRDDVITQYHEMKEKMRSKWKDGKCIA-YFQAYTNT--- 103

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
              + ++ +           V ++I   P  +  +               + LG+Q++ E
Sbjct: 104 HAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHE 163

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++   + R H+    +  ++  R    R+   +I  LP +         +      +  +
Sbjct: 164 RTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLENYDMMMETAREVAKLDIQGI 223

Query: 203 SLYQLTIEKGTLFY 216
            ++ L + KGT   
Sbjct: 224 KIHLLHLLKGTPMQ 237


>gi|293607161|ref|ZP_06689503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Achromobacter piechaudii
           ATCC 43553]
 gi|292814495|gb|EFF73634.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Achromobacter piechaudii
           ATCC 43553]
          Length = 484

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    +       Q     ++   +   + G      E 
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVADLADQGVKEVTLLGQNVNAYRGKMEGTDEI 249

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A++L+ + +   +      T  ++P  +       Y +    V+ + L VQ+  ++ 
Sbjct: 250 ADFAMLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRV 307

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E  + +   R   P ++   D I   P +T   +E  ++       D  
Sbjct: 308 LAGMKRGYTTLEFKSVVRRLRAARPDLTLSSDFIVGFPGETEEDFEKTMKLIEDVGFDTS 367

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 368 FSFVYSRRPGTP 379


>gi|289192765|ref|YP_003458706.1| MiaB-like tRNA modifying enzyme [Methanocaldococcus sp. FS406-22]
 gi|288939215|gb|ADC69970.1| MiaB-like tRNA modifying enzyme [Methanocaldococcus sp. FS406-22]
          Length = 415

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 3/103 (2%)

Query: 119 VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DL 175
               + Y+   V + + L +QS +++ L+ + R +   E    ++  R     + F  D+
Sbjct: 232 DELIEVYKDDKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDI 291

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           I   P +T  Q++  L+       D++   + +  KGT   KM
Sbjct: 292 IVGFPGETEEQFQNTLEVLKELKPDYIHGAKYSQRKGTEAAKM 334


>gi|224536031|ref|ZP_03676570.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522356|gb|EEF91461.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 439

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 TFFNLVKALDEVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++     + +   + + P   +  D+I     +T   +E   +   S  V  L 
Sbjct: 273 KLMRRRYDTELFASKVRKVKEVMPDAFIGVDVIVGTRGETDEYFEQAYEFIKSLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|209694559|ref|YP_002262487.1| hypothetical protein VSAL_I0996 [Aliivibrio salmonicida LFI1238]
 gi|229890434|sp|B6EIN8|MIAB_ALISL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|208008510|emb|CAQ78681.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 474

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 15/215 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +N+    ++ +  +V     C K C YC                +   L E+  + +  G
Sbjct: 137 DNLPEPKADGVSAFVSIMEGCSKYCTYC---VVPYTRGEEVSRPLDDVLFEIAQLAEQ-G 192

Query: 68  PRSISSIFFG---GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ 123
            R ++ +         P      +I    D +    ++     +     +P     +   
Sbjct: 193 VREVNLLGQNVNAYRGPMY--DGDICSFADLLRMVASIDGIDRLRFTTSHPLEFGDDIVA 250

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYAL 179
            Y      V+ + L VQS  ++ L  + R H A E  + I   R   P +  S D I A 
Sbjct: 251 VYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDILISSDFIVAF 310

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           P ++   ++  ++       D    +  +   GT 
Sbjct: 311 PGESEKDFQDTMKLIKDVDFDMSYSFVFSPRPGTP 345


>gi|150019979|ref|YP_001305333.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Thermosipho
           melanesiensis BI429]
 gi|229891013|sp|A6LJ47|MIAB_THEM4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|149792500|gb|ABR29948.1| RNA modification enzyme, MiaB family [Thermosipho melanesiensis
           BI429]
          Length = 430

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C + C YC            +   +   + E++ + + +G + ++ +          L +
Sbjct: 147 CNRFCTYC---IVPYTRGREKSRKMDDIINEVENLAK-SGIKEVTYLGQNVDAYGKDLND 202

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             ++A +L+       +       + + P+   ++       +      I L VQ    +
Sbjct: 203 GSSLAKLLNLTKDIEEIERIWF--LTSYPTDFSLDIAHEVANSSKITKNIHLPVQHGSNK 260

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +   E I  I+  R I P   +S D+I   P +T   +E  ++   +   + 
Sbjct: 261 ILKKMNRRYTIEEYIELINDIRKIVPDASISSDIIVGFPDETEEDFEKTVELVKNIKFER 320

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           L+L   +  +GT+ +K  +D    +        + NL + I   
Sbjct: 321 LNLAIYSPREGTIAWKYFEDNVPRIIKTKRMAYILNLQKEINKQ 364


>gi|294102364|ref|YP_003554222.1| RNA modification enzyme, MiaB family [Aminobacterium colombiense
           DSM 12261]
 gi|293617344|gb|ADE57498.1| RNA modification enzyme, MiaB family [Aminobacterium colombiense
           DSM 12261]
          Length = 440

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 8/163 (4%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P     +  +           I+L +QS  ++ L+ + R +  ++    + + RN 
Sbjct: 233 VTSHPKDFTPDIVEVMAHHPKICPSINLPIQSGSDRILKKMNRKYTLAKYRETVSVIRNA 292

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +    DLI   P +T   ++  +     +  D +     +  +GT    M    D  
Sbjct: 293 LPEVGLTSDLIVGFPGETEEDFQASVAALHEFRYDLVHTAAYSPREGTAASTMEDQIDQD 352

Query: 226 LPSEN---VAVDLYNLTQSITSAHGLHAYEI-SNHSFLGAESL 264
           +  +    V      +   I        Y+I  +      ESL
Sbjct: 353 VKMKRLNTVNAVQSEIALQINRGLVGKRYKILIDDWAPKGESL 395


>gi|238920797|ref|YP_002934312.1| tRNA-I(6) [Edwardsiella ictaluri 93-146]
 gi|238870366|gb|ACR70077.1| tRNA-I(6) [Edwardsiella ictaluri 93-146]
          Length = 474

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 64/205 (31%), Gaps = 26/205 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----------FFG 77
           C K C YC                    L E+  +    G R ++ +           F 
Sbjct: 157 CNKYCTYC---VVPYTRGAEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGATFD 212

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           GG   +     +  ++  I        +      ++P     +    Y      V+ + L
Sbjct: 213 GG---ICSFAELLRLVAAIDGI-----DRIRFTTSHPIEFSDDIVAVYEDTPELVSFLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + R H A E  A I   R   P +  S D I   P +T   +E  +Q 
Sbjct: 265 PVQSGSDRILNLMKRTHTALEYKAIIRKLRRARPDIQISSDFIVGFPGETQQDFEQTMQL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                 D    +  +   GT    M
Sbjct: 325 IAEVDFDMSYSFIFSARPGTPAADM 349


>gi|255282411|ref|ZP_05346966.1| MiaB protein [Bryantella formatexigens DSM 14469]
 gi|255266995|gb|EET60200.1| MiaB protein [Bryantella formatexigens DSM 14469]
          Length = 454

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 75/233 (32%), Gaps = 22/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +  Y  G+    +     +  +  L        +  G    S  + +
Sbjct: 184 CNQFCSYC-----IIPYARGRIRS-RELADVLAEVSTLAENGYQEVVLTGIHLSSYGKEK 237

Query: 88  N----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +    +  +++ + +   +      ++E  P  +     +   +         L +QS  
Sbjct: 238 DDGIGLLQLIEAVHEVEGIRRIRLGSLE--PRIITEEFAERLSELPKICPHFHLSLQSGC 295

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + +L+ + R++   E      L R  F    ++ D+I   P +T  ++            
Sbjct: 296 DATLKRMNRHYTTEEYYEKCVLLRRYFDDPALTTDVIVGFPGETEEEFAQTCAFLEKVKF 355

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               +++ +  KGT    M       + +E   V          +   +  YE
Sbjct: 356 YETHIFKYSRRKGTKAAAMENQVPEEIKNERSKVL------QELNKRNMAQYE 402


>gi|183981582|ref|YP_001849873.1| 2-methylthioadenine synthetase, MiaB [Mycobacterium marinum M]
 gi|229890403|sp|B2HGN2|MIAB1_MYCMM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB 1; AltName: Full=tRNA-i(6)A37 methylthiotransferase
           1
 gi|183174908|gb|ACC40018.1| 2-methylthioadenine synthetase, MiaB [Mycobacterium marinum M]
          Length = 529

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 74/252 (29%), Gaps = 24/252 (9%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQ 53
           ++ L  + + +     ++   +V     C   C +C             R        +Q
Sbjct: 150 LESLRTFPSALPAARDSAYAAWVSISVGCNNSCTFCIVPSLRG--KEADRRPGDILAEVQ 207

Query: 54  SFLTE--MQWMRQLTGPRSISSIFFGGGTPSL----IEPQ--NIALILDGIAKNWTVSSN 105
           + + +  ++    L    +   + F    PS     +       A +L    +   +   
Sbjct: 208 ALVEQGVLEVTL-LGQNVNSYGVNFADPDPSTGEEPLPRDRGAFAQLLRACGRIEGLERI 266

Query: 106 VEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH- 162
                  +P+    +      +       + + +QS  +Q L+ + R++     +  I  
Sbjct: 267 RF--TSPHPAEFTDDVILAMAETPAVCPHLHMPLQSGSDQILKAMRRSYRRDRYLGIIDK 324

Query: 163 -LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             A      ++ D+I   P +T   +E  L             +Q +   GT    M   
Sbjct: 325 VRAAIPHAAITTDIIVGFPGETEHDFEQTLDVVQKARFTSAFTFQYSPRPGTPAADMPDQ 384

Query: 222 GDLVLPSENVAV 233
               +  +    
Sbjct: 385 IPKNVVQQRFER 396


>gi|331002891|ref|ZP_08326404.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae oral taxon 107
           str. F0167]
 gi|330413184|gb|EGG92558.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae oral taxon 107
           str. F0167]
          Length = 457

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 114 PSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P  ++ N  +   K         L +QS  +++L+ + R + A E    + L R  F   
Sbjct: 257 PRIIKENFIKSLSKIEKFCPHFHLSLQSGCDKTLKSMNRKYTADEFFEGVKLIRKYFDSP 316

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            ++ D+I   P +T   +E   +           ++  +I +GT    M +
Sbjct: 317 AVTTDIIVGFPGETKKDFEESKKFVEKVKFYETHIFPYSIREGTKAANMPQ 367


>gi|310821577|ref|YP_003953935.1| tRNA-i(6)a37 thiotransferase enzyme miab [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394649|gb|ADO72108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Stigmatella aurantiaca
           DW4/3-1]
          Length = 467

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R +     F           R   G R ++    G    S     
Sbjct: 157 CDNVCSFC--VVPHTRGREVSRAFPDVLTEVADLAR--VGLREVT--LIGQNVNSYRGGI 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A +L   A+   +      T  ++P  +       +R          L VQ   ++ L
Sbjct: 211 SFAQLLLRTAEVPGIERVRFTT--SHPHDLSDELIDAFRTQPKIAPHFHLPVQCGSDRIL 268

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++   + +  +    A      ++ D+I   P +T   +EM +Q       +   
Sbjct: 269 KMMRRDYTVVQYLERLEKLRAARPGIAVTTDIIVGFPGETEEDFEMTMQLTEQVRYESQF 328

Query: 204 LYQLTIEKGT 213
            +  +    T
Sbjct: 329 SFIFSPRPKT 338


>gi|308069437|ref|YP_003871042.1| Biotin synthase [Paenibacillus polymyxa E681]
 gi|305858716|gb|ADM70504.1| Biotin synthase [Paenibacillus polymyxa E681]
          Length = 339

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 58/192 (30%), Gaps = 16/192 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N    RY++  E  +           +L     +             
Sbjct: 46  CRQDCMYCGLRASNKQADRYRLQPEEILACCAEG----YELGYRTFVLQSGEDY----WF 97

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  ++  I   +      ++ +  +    +   ++   +AG +R  L  ++   + 
Sbjct: 98  TAARLTKLIREIKSRF-----ADVAVTLSIGERDDETYEQLYEAGADRFLLRHETASPRL 152

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L          + +   + I  ++    +  LP QT ++   +L    S + D + +
Sbjct: 153 YAKLHPTMTMESRRSRLLALQRIGFQIGAGCMVGLPGQTNSELADDLVYLHSLSPDMIGI 212

Query: 205 YQLTIEKGTLFY 216
                   T   
Sbjct: 213 GPFLPHSNTPLR 224


>gi|302874528|ref|YP_003843161.1| cobalamin B12-binding domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|307690860|ref|ZP_07633306.1| cobalamin B12-binding domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302577385|gb|ADL51397.1| cobalamin B12-binding domain protein [Clostridium cellulovorans
           743B]
          Length = 551

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 66/226 (29%), Gaps = 24/226 (10%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLI 84
           C   C YC    SH  R+    +  ++     +    +L     R+ +            
Sbjct: 183 CPFSCSYCLSSTSHGVRFHS-IDRVLKELQYFIDKKVRLVKFVDRTFNCNHK-------F 234

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
                  ++          +  +   E +   ++       R A   R     GVQ+  +
Sbjct: 235 SMAIWEFLIKA-------DTKTQFHFEISADILKQEEIDLLRNAPEGRFQFEVGVQTTND 287

Query: 143 QSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             LR + R  N S+     I L      +   DLI  LP +    ++       S   + 
Sbjct: 288 DVLRNINRFVNFSDIKEKVIELMSIKNIKQHLDLIAGLPGEDYESFKKSFNDVYSIKPEE 347

Query: 202 LSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
           + L  L + KG+   +    +       P   +        + +  
Sbjct: 348 IQLGFLKLLKGSSMREDADKYGMKYSPYPPYEILKTNKISYEELLK 393


>gi|150026019|ref|YP_001296845.1| hypothetical protein FP1979 [Flavobacterium psychrophilum JIP02/86]
 gi|229890536|sp|A6H119|MIAB_FLAPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|149772560|emb|CAL44043.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 481

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 75/242 (30%), Gaps = 23/242 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGG---T 80
           C   C +C   F     R +  Q    +      +  ++  L G    S +++GGG    
Sbjct: 178 CDNMCTFCVVPFTRGRERSREPQSIMAEIQDLWHKGFKEITLLGQNVDSYLWYGGGLKKD 237

Query: 81  PSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
            +               +L+ +A              +NP  +  +      K       
Sbjct: 238 FTNASEIQKATAVDFDQLLEMVA--VGFPKMRIRFSTSNPQDMHESILHVMAKHSNICKH 295

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I L VQS   + L+ + R H   E +  I   R I P  S   D+I   P +T    +  
Sbjct: 296 IHLPVQSGSNRILKEMNRLHTREEYMILIDKIRAIIPNASISQDMIAGFPTETEEDHQDT 355

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           +        +   +Y  +   GTL  +  KD      S+ +          +   H    
Sbjct: 356 ISLMQYVKYNFGYMYSYSERPGTLAGRKMKDD----VSDEIKARRLQEIVDLQQKHAWWR 411

Query: 251 YE 252
            E
Sbjct: 412 SE 413


>gi|149198156|ref|ZP_01875203.1| hypothetical protein LNTAR_15882 [Lentisphaera araneosa HTCC2155]
 gi|149138758|gb|EDM27164.1| hypothetical protein LNTAR_15882 [Lentisphaera araneosa HTCC2155]
          Length = 452

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 25/261 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C + C YC     +  +  GQE   ++  + +  ++ L+       ++ G    +  LIE
Sbjct: 156 CNEYCTYC-----IVPFTRGQEKS-RTIASIIAEVKALSEKGVREIMYLGQNITAYGLIE 209

Query: 86  PQN----------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRI 133
            +            A +L   AK   +          +      +              I
Sbjct: 210 ARRDRTFNKEVSPFAALLRETAKIEGIKRIRF--TSPHARYFNDDLIDTIAAEPKICRAI 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
              +QS   + L+ + R H A E ++ I+  +     ++F  DLI   P +T   ++   
Sbjct: 268 HFPLQSGSNRLLKVMRRRHTAEEFLSWINKMKERIDGITFTTDLIVGFPGETEEDFKATR 327

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   D   +++ +  K T   +M    D     E   + L +L +   +       
Sbjct: 328 DMCNEIDFDQQFIFRYSTRKNTPAAQMPNQLDEETKIERNQILLKDL-EERLTHKNEQRV 386

Query: 252 EISNHSFLGAESLHNLNYWRY 272
                  +   S  N + W  
Sbjct: 387 GTIEEIMVEGVSKRNDDKWTG 407


>gi|149184079|ref|ZP_01862427.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1]
 gi|148848213|gb|EDL62515.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1]
          Length = 445

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 76/233 (32%), Gaps = 11/233 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 156 CNNFCTFC---IIPWARGLMRSREPEEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 212

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
           N+A++L  + +       + I+     S +     +     K  V  + + +QS     L
Sbjct: 213 NLAMLLRDLEEKVDGLKRIRIS-SIEASQLTDEVIEVIDNSKLVVRHLHIPLQSGSNTVL 271

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +   +       ++ D+I   P +T  +++        +    L 
Sbjct: 272 KRMRRKYTMEFFAERLEKLKKALPGLAVTSDVIVGFPGETEEEFKETYNFIKEHKFSELH 331

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +E V   +     L +   S       E+
Sbjct: 332 VFPYSKRTGTPAARMTDQIDEEIKNERVHRLIELSNQLAKEYASQFEYEVLEV 384


>gi|145224548|ref|YP_001135226.1| RNA modification protein [Mycobacterium gilvum PYR-GCK]
 gi|229890565|sp|A4TCM9|MIAB_MYCGI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145217034|gb|ABP46438.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium gilvum
           PYR-GCK]
          Length = 512

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 89/273 (32%), Gaps = 26/273 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQS 54
           + L  + + +     ++   +V     C   C +C           V R        +Q+
Sbjct: 147 ESLREFPSALPASRESAYAAWVSISVGCNNTCTFCIVPSLRG--KEVDRRPGDVLAEVQA 204

Query: 55  FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EAN 113
            + +      L G +++++       P+  E ++       +     +     +     +
Sbjct: 205 LVDQGVLEITLLG-QNVNAYGVSFADPT--EARDRGAFAKLLRACGRIDGLERVRFTSPH 261

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P  
Sbjct: 262 PAEFTDDVIEAMAQTSNVCPTLHMPLQSGSDRILRAMRRSYRADRYLGIIDRVRTAIPHA 321

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DLI   P +T   ++  L    +        +Q +   GT   ++           
Sbjct: 322 AITTDLIVGFPGETEEDFQATLDVVEAARFSSAFTFQYSKRPGTPAAELEGQIP------ 375

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
                +    Q +       ++E  N + +G E
Sbjct: 376 --KAVVSERYQRLIELQERISWE-ENRAQIGRE 405


>gi|115379590|ref|ZP_01466678.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363417|gb|EAU62564.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Stigmatella aurantiaca
           DW4/3-1]
          Length = 443

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R +     F           R   G R ++    G    S     
Sbjct: 133 CDNVCSFC--VVPHTRGREVSRAFPDVLTEVADLAR--VGLREVT--LIGQNVNSYRGGI 186

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A +L   A+   +      T  ++P  +       +R          L VQ   ++ L
Sbjct: 187 SFAQLLLRTAEVPGIERVRFTT--SHPHDLSDELIDAFRTQPKIAPHFHLPVQCGSDRIL 244

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++   + +  +    A      ++ D+I   P +T   +EM +Q       +   
Sbjct: 245 KMMRRDYTVVQYLERLEKLRAARPGIAVTTDIIVGFPGETEEDFEMTMQLTEQVRYESQF 304

Query: 204 LYQLTIEKGT 213
            +  +    T
Sbjct: 305 SFIFSPRPKT 314


>gi|315444879|ref|YP_004077758.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium sp. Spyr1]
 gi|315263182|gb|ADT99923.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium sp. Spyr1]
          Length = 516

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 89/273 (32%), Gaps = 26/273 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQS 54
           + L  + + +     ++   +V     C   C +C           V R        +Q+
Sbjct: 151 ESLREFPSALPASRESAYAAWVSISVGCNNTCTFCIVPSLRG--KEVDRRPGDVLAEVQA 208

Query: 55  FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EAN 113
            + +      L G +++++       P+  E ++       +     +     +     +
Sbjct: 209 LVDQGVLEITLLG-QNVNAYGVSFADPT--EARDRGAFAKLLRACGRIDGLERVRFTSPH 265

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P  
Sbjct: 266 PAEFTDDVIEAMAQTSNVCPTLHMPLQSGSDRILRAMRRSYRADRYLGIIDRVRTAIPHA 325

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ DLI   P +T   ++  L    +        +Q +   GT   ++           
Sbjct: 326 AITTDLIVGFPGETEEDFQATLDVVEAARFSSAFTFQYSKRPGTPAAELEGQIP------ 379

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
                +    Q +       ++E  N + +G E
Sbjct: 380 --KAVVSERYQRLIELQERISWE-ENRAQIGRE 409


>gi|71909808|ref|YP_287395.1| cobalamin B12-binding:radical SAM family protein [Dechloromonas
           aromatica RCB]
 gi|71849429|gb|AAZ48925.1| Cobalamin B12-binding:Radical SAM [Dechloromonas aromatica RCB]
          Length = 548

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 68/258 (26%), Gaps = 25/258 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +CD     R YK     +       M+++R   G   +  I       +     
Sbjct: 211 CPYTCSFCDRTVFERLYKTNSAQYT---YDHMKYLRDNFG---VYHINMYDDLFT----A 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + D           ++                  ++AG   +S+G++S +   +  
Sbjct: 261 KKQRVFDLCELLIEKPLGIQWNCAIRTGHTSDEMLAKLKQAGALMVSMGIESADPGMMER 320

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
                        +        R     I+ +P +T    ++     LS  +D +++ + 
Sbjct: 321 HKAGVTLDAVRDTVRQIHAAGLRAKGLFIFGMPGETPETVKVTSDFILSLDLDEMNMTKF 380

Query: 208 TIEKGTLFY-------------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY--E 252
           +   G   +                    L                ++ + H    Y  +
Sbjct: 381 SPLHGAPIWDECAAGVGGEMIEDWRLMNCLNFVYLPEGFKSREEMDALYNWHVKRFYDSK 440

Query: 253 ISNHSFLGAESLHNLNYW 270
              H F      H  + W
Sbjct: 441 GYRHRFAKRLWAHRWSLW 458


>gi|33861861|ref|NP_893422.1| 2-methylthioadenine synthetase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81575722|sp|Q7V0F7|MIAB_PROMP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33640229|emb|CAE19764.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 464

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP- 81
           C ++C YC            Q  +  +  +E++ +      + ++ +      +G   P 
Sbjct: 170 CNERCSYC---VVPSVRGKEQSRYPDAIKSEIESLAH-NNFKEVTLLGQNIDAYGRDLPG 225

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     I     +P            +         +  Q
Sbjct: 226 TTKEGRKENSLTDLLYFIHDVEGIKRIRFSTSHPKYFSKRLINACYELDKVCEHFHIPFQ 285

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + LR + R +   +    I   R + P  S   D I A P +T TQ+   L+    
Sbjct: 286 SGNNEILRLMARGYTIEKYKRIIENIRQLMPNASITADAIVAFPGETETQYRETLKLISD 345

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D +     +    T       D  +    +   +   N     TS      Y
Sbjct: 346 IGFDQVMTAAYSPRPNTP--AAFWDNQIPEEVKKERLKEINELVETTSRKRNQRY 398


>gi|313114955|ref|ZP_07800450.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622715|gb|EFQ06175.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 431

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C ++C YC      R     +     S L E++ +   +G R +         PS  L  
Sbjct: 152 CNRQCAYC---VIPRARGPVRSRDEASILAELRQLAA-SGYREVVLSAI--SLPSYGLDT 205

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
             N+  +++  A+   +      ++  +P  +           +    +  L +QS    
Sbjct: 206 GTNLVELVEHCAQVEGIQRIRLGSL--DPDMLTPEFITRLAAVEKLCPQFHLSLQSGCTA 263

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP----RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +LR + R + A +    +   R  +       + D I   P +T   +E   +       
Sbjct: 264 TLRRMRRVYTAEQYAQVVDQLRAAYGERPVSFTTDCICGFPGETQADFEESCEFLKKIGF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + ++  +   GT  Y   +   
Sbjct: 324 LKVHVFPYSRRSGTPAYDFPEQVH 347


>gi|289642430|ref|ZP_06474576.1| RNA modification enzyme, MiaB family [Frankia symbiont of Datisca
           glomerata]
 gi|289507775|gb|EFD28728.1| RNA modification enzyme, MiaB family [Frankia symbiont of Datisca
           glomerata]
          Length = 469

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 17/233 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  + S     +V     C   C +C     V   +  + +  +     +
Sbjct: 115 VEALEVFPSALPSRRSTHHSAWVSISVGCDNTCTFC----IVPSLRGREAD--RRPGGVL 168

Query: 60  QWMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             +  L     I     G    S    L +P   A +L        +          +P 
Sbjct: 169 AEVEALVADGVIEITLLGQNVNSYGRSLGDPGAFAKLLHACGTIDGLERVRF--TSPHPR 226

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRM 171
               +  +          ++ + +QS  +  LR + R++     +  +    A      +
Sbjct: 227 DFTDDVIEAMAATPNVCPQLHMPLQSGSDAVLRRMRRSYRQERFLGILERVRAVMPHAAI 286

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           + D+I   P +T   +   L+            +Q +   GT    M    D 
Sbjct: 287 TTDIIVGFPGETEADFADTLRVVREARFAGAFTFQYSARAGTPAAAMDGQVDP 339


>gi|307109122|gb|EFN57360.1| hypothetical protein CHLNCDRAFT_30275 [Chlorella variabilis]
          Length = 524

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 19/205 (9%)

Query: 23  VHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFG 77
           +H   C +KC YC            Q    ++   EM  + +  G R ++ +      +G
Sbjct: 229 IH--GCNEKCTYC---IVPFTRGQEQSRTPEAIRREMLSLGE-AGYREVTLLGQNVDAYG 282

Query: 78  GGTPSLIEP---QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VN 131
              P        +      D +     V     I     +P        +   +      
Sbjct: 283 RDLPGFAPDNSGRRAWTFNDLLRHVHDVPGIARIRFATSHPRYFTERLIRACAELDKLCE 342

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
              +  QS +   LR + R +        +H  R   P   +S D I   P ++  Q+E 
Sbjct: 343 FFHVPFQSGDNYILREMKRGYTHERYREMVHTIRRHMPDASISGDAIVGFPGESEEQFER 402

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTL 214
            +        D ++    +   GT 
Sbjct: 403 TVALVEEVGFDRVNTAAYSPRPGTP 427


>gi|229890679|sp|A4XYW1|MIAB_PSEMY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 447

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 10/219 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C       R +          L   Q   +     ++      G   +  +  
Sbjct: 157 CSKYCTFC--VVPYTRGEEVSRPLADVLLEITQLTDKGVKEVTLLGQNVNGYRGATPDGR 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P          + +    V  + L VQS  ++
Sbjct: 215 IADFAELLHAVAALDGIERIRYTT--SHPLEFSDAIIAAHAEIPQLVKYLHLPVQSGSDR 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + RNH A E  + I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 273 ILAAMKRNHTALEYKSRIRKLRAAVPDILISSDFIVGFPGETEKDFEQTMKLIEDVGFDF 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +  +   GT    +  D    +  + +A+  + + Q
Sbjct: 333 SFSFIYSSRPGTPAADLVDDTPDEVKKQRLAILQHRINQ 371


>gi|118431496|ref|NP_148004.2| MiaB-like protein [Aeropyrum pernix K1]
 gi|116062821|dbj|BAA80529.2| MiaB homolog [Aeropyrum pernix K1]
          Length = 450

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 32  CPYCDFNSHVRRYKVG-------QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C +C   + V R +V         E   ++     + +R      ++  +    G P+L 
Sbjct: 168 CSFC--ITKVARRQVRSYSPRVIVERVREAVEKGAREIRLTGTDVAVYGVDL-PGKPNL- 223

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQ 143
               +A IL+ +  ++ +   +    +  P     +    YR   V     L VQS +++
Sbjct: 224 -ADLVAAILEKVEGDYRIRVGMMTPDQVEPYL--DSLLDVYRDERVYKYFHLPVQSGDDE 280

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + RN+  SE  A     ++ FP   ++ D+I   P +T   +   ++       + 
Sbjct: 281 VLKIMKRNYTVSEYKAIHRRIKSRFPDAMIATDIIVGHPGETWEAFWNTVRLVEELRFEK 340

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + L Q ++   T    M +  D
Sbjct: 341 VHLAQYSLRPHTEAASMEQVPD 362


>gi|42520296|ref|NP_966211.1| TRAM domain-containing protein [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|225630141|ref|YP_002726932.1| tRNA-i(6)A37 modification enzyme MiaB [Wolbachia sp. wRi]
 gi|81652678|sp|Q73HW8|MIAB_WOLPM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|42410034|gb|AAS14145.1| TRAM domain protein [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|225592122|gb|ACN95141.1| tRNA-i(6)A37 modification enzyme MiaB [Wolbachia sp. wRi]
          Length = 439

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 73/232 (31%), Gaps = 23/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQ-------LTGPRSISSIFFGGG 79
           C K C +C                +     E ++ +         L    +       G 
Sbjct: 155 CDKFCTFC---VVPYTRGAEYSRPVNEIFREALKLVANGANEINLLGQNVNAYHGECEGE 211

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                   ++  ++  IAK   +      T  ++P  +  + +  + +    +  + L V
Sbjct: 212 V------WDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLAHAEEPKLMPFVHLPV 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R H A E +  I   R + P +  S D I   P +T   +E  ++   
Sbjct: 264 QSGSNKILHAMNRKHTAEEYLEIIDRFRKLKPEIEFSSDFIVGFPGETEKDFEETMKLVE 323

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                    ++ +   GT   +        + +E +      +++     + 
Sbjct: 324 KVRYAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQKLISKQQLEFNQ 375


>gi|194334273|ref|YP_002016133.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312091|gb|ACF46486.1| Radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 467

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 76/234 (32%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  I   + EM++ ++  G + I+  F          P 
Sbjct: 205 CPVGCNFCTTPTIYGKNYRYRE--IDFVIDEMRYHQERLGKQKINFSFMDDNI--SFRPA 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +AK       +      + + +          ++G + +S+G +SL  ++L+
Sbjct: 261 YFMELLEEMAKL-----GIRWNANISMNFLHKPEIAELAGRSGCDLMSIGFESLNPETLK 315

Query: 147 FLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N  +     +         +    ++     +   +++     +   ++     
Sbjct: 316 SVHKGSNRLDNYETVVSNLHKNGVAIQGYFMFGFDNDSEESFQLTYDFIMKNQIEFPVFS 375

Query: 206 QLTIEKGTLFYK------MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            +T   GT ++        H D D       +        + +         E+
Sbjct: 376 LVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPNTMTGEKLLENFVKLQKEV 429


>gi|66362220|ref|XP_628074.1| ELP3 like acetyltransferase involved in transcription
           [Cryptosporidium parvum Iowa II]
 gi|46227438|gb|EAK88373.1| ELP3 like acetyltransferase involved in transcription
           [Cryptosporidium parvum Iowa II]
          Length = 915

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 15/178 (8%)

Query: 106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
           + +T+E  P  + ++     R+ G  R+ LG+Q  +   L+ + R     + + +I L +
Sbjct: 319 IGLTLETRPDYITLDEILQLREFGCTRVQLGIQHTDYWVLKLINRGCYMRQIVKSIRLLK 378

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
           +   ++   L+  LP      ++       + A D   +     ++ TL   +       
Sbjct: 379 DTGYKVDIHLMPDLPN----PYDHTSTNEFNLAPDESHILS---KRITLLKDLQAYIGFD 431

Query: 226 LPSENVAVDLYNLTQSITS-------AHGLHAYEISNHSFLGAESLHNLNYWRYGDYI 276
                  V+ Y +  ++ S          L+  E+   S +  E   N  Y  Y +  
Sbjct: 432 NAQTLGVVNDYLMLSNVLSDPKLQCDQWKLYPCEVVPFSKI-EEWYENKAYLPYAEIF 488


>gi|291515240|emb|CBK64450.1| SSU ribosomal protein S12P methylthiotransferase [Alistipes shahii
           WAL 8301]
          Length = 432

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 71/222 (31%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC          + +   +   + E++   +    + +  +       +     
Sbjct: 144 CNWKCGYCA-------IPLIRGAHVSVPMEELEEEARKLAGQGVRELMVIAQDTTYYGID 196

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + + +   +     I +  A P+       +           + +  Q + +
Sbjct: 197 LYGRRMLAELLRRLCRIDGIEWIRLHYAYPAGFPDEVIEAMASEPKICKYLDIPFQHISD 256

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R H  +EA+  I   R   P ++    L+   P +T   +E  L        +
Sbjct: 257 AQLASMHRRHTKAEAMELIGRLRGAIPDLALRTTLLVGYPGETEADFEELLAFVREVRFE 316

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L ++  + E+GT   +  +D       +  A  +  L   I
Sbjct: 317 RLGVFPYSEEEGTWSAENLRDDIPETIKQQRAERVMALQNEI 358


>gi|251780611|ref|ZP_04823531.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084926|gb|EES50816.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 446

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 78/232 (33%), Gaps = 24/232 (10%)

Query: 7   YENNMTGQGSNSL-----GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y +    +GS  L       Y+     C   C YC       +++  +       +  + 
Sbjct: 130 YSDENINEGSRILTTQKESAYIRIAEGCNNFCTYCIIPKIRGKFRSRR-------MENII 182

Query: 61  WMRQLTGPRSISSIFFGGGTPS-----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                   + +  +       +     +   +N+ ++L  ++    +       +   P 
Sbjct: 183 SEATDLASKGVKELILIAQDTTQYGSDIYGKKNLHILLKELSNIEGIKWIR--VLYCYPE 240

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           ++     +        V  + + +Q + +  L+ +GR  +  +    I   R   P +  
Sbjct: 241 AIYDELIEEIAANDKVVKYLDIPIQHISDHVLKLMGRKTSKKDITDKIEKLRKNIPNIII 300

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               I   P++T   +E  L+    Y +D + +++ + E+ T   KM    D
Sbjct: 301 RTTFIVGFPQETQEDFEEILEFLQEYKLDKVGVFKYSREEDTPASKMDGQID 352


>gi|163816750|ref|ZP_02208113.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
 gi|158448007|gb|EDP25002.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
          Length = 450

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C + C YC     +  Y  G+    +S    +  + +L        +  G    S     
Sbjct: 167 CNQFCSYC-----IIPYVRGRIRS-RSEEAVIAEVTELAESGIKEVVLTGIHISSYGKDK 220

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  ++D I+K   +      ++E  P  +  +  +             L +QS  
Sbjct: 221 NNEGALIDLIDAISKIKGIKRIRLGSLE--PGIITEDFVRRVSANKKVCPHFHLSLQSGC 278

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +   +      + R  +  P ++ D+I   P +T  ++E  +Q      +
Sbjct: 279 NTILKRMNRKYTREQYFEKCEMLREAYDAPALTTDVIVGFPGETDEEFEETVQYLTELNL 338

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             + +++ +  KGT+   M
Sbjct: 339 YEMHIFKYSPRKGTVAAAM 357


>gi|146308794|ref|YP_001189259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas mendocina
           ymp]
 gi|145576995|gb|ABP86527.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas mendocina
           ymp]
          Length = 459

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 10/219 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C +C       R +          L   Q   +     ++      G   +  +  
Sbjct: 169 CSKYCTFC--VVPYTRGEEVSRPLADVLLEITQLTDKGVKEVTLLGQNVNGYRGATPDGR 226

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    +      T  ++P          + +    V  + L VQS  ++
Sbjct: 227 IADFAELLHAVAALDGIERIRYTT--SHPLEFSDAIIAAHAEIPQLVKYLHLPVQSGSDR 284

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + RNH A E  + I   R   P +  S D I   P +T   +E  ++       D 
Sbjct: 285 ILAAMKRNHTALEYKSRIRKLRAAVPDILISSDFIVGFPGETEKDFEQTMKLIEDVGFDF 344

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +  +   GT    +  D    +  + +A+  + + Q
Sbjct: 345 SFSFIYSSRPGTPAADLVDDTPDEVKKQRLAILQHRINQ 383


>gi|116747616|ref|YP_844303.1| RNA modification protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696680|gb|ABK15868.1| RNA modification enzyme, MiaB family [Syntrophobacter fumaroxidans
           MPOB]
          Length = 440

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 12/198 (6%)

Query: 28  CVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG-GTPSLIE 85
           C   C YC    +  R   +  +  +      ++   +      I    +G   TP+   
Sbjct: 156 CNAYCSYCVVPYTRGRSRSLPADEVLSRLRRFVEVGYREVILTGIHLGQWGKDLTPTRDL 215

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  I D  +      S++E      P        +             + +QS ++ 
Sbjct: 216 AGLLDRIGDSDSPPRVRLSSLE------PLEWSAGLLRRISTVPWICPHFHIPLQSGDDD 269

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A +    I   R +FP   +  D++   P +T  ++   L       + +
Sbjct: 270 VLAAMHRPYTALQYANLIRELRMLFPEAALGADVMVGFPGETQRRFLNTLHLVEELPLTY 329

Query: 202 LSLYQLTIEKGTLFYKMH 219
           L ++  +   GT    M 
Sbjct: 330 LHVFPFSPRPGTPAADMP 347


>gi|253583638|ref|ZP_04860836.1| 2-methylthioadenine synthetase [Fusobacterium varium ATCC 27725]
 gi|251834210|gb|EES62773.1| 2-methylthioadenine synthetase [Fusobacterium varium ATCC 27725]
          Length = 445

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 83/231 (35%), Gaps = 26/231 (11%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYC-------DFNSHVRRYKVGQEN-F 51
           M +L+  E +     ++    Y+     C +KC YC       +  S      + + N  
Sbjct: 128 MDFLADSETDRVLTTASHTA-YLKIAEGCDRKCTYCIIPQLRGNLRSRTIEDILKEANKL 186

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + S + E+  + Q T    I           L + +++A ++  + K   +       + 
Sbjct: 187 VASGVRELNLLAQETTEYGID----------LYKEKSLARLMKELVKIDGLKWLRTYYM- 235

Query: 112 ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
             P S+        +  +       + VQ + +  L+ +GR  + +     ++  R   P
Sbjct: 236 -FPDSLTDELIDVMKTEEKICKYFDIPVQHISDNILQQMGRAKSGNHIKGILNRIRKEIP 294

Query: 170 RMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
                  +I   P +T   +E        Y  D++ +++ + E+ T  Y M
Sbjct: 295 DAVIRTAVIVGFPGETEENFEELKAFIEEYKFDYVGVFKYSREEDTKAYDM 345


>gi|56476163|ref|YP_157752.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Aromatoleum
           aromaticum EbN1]
 gi|81358300|sp|Q5P760|MIAB_AZOSE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56312206|emb|CAI06851.1| 2-methylthioadenine synthetase [Aromatoleum aromaticum EbN1]
          Length = 445

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 19/218 (8%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +NM          +V     C K   YC F              +   L E+  +    G
Sbjct: 136 DNMPPARVEGASAFVSIMEGCSK---YCTFCVVPYTRGEEVSRPLDDVLAEVAGLAGQ-G 191

Query: 68  PRSISSI-----FFGGGTPSLIEPQN--IALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
            R ++ +      + G   +    +    A +L+ +A+   +      T  ++P  +   
Sbjct: 192 VREVTLLGQNVNAWRGEI-TRDGGEQGDFAFLLECVAEIPGIERLRFTT--SHPREMTQR 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
            F  Y K    V+ + L VQS  ++ L  + R ++  E  + +   R   P +S   D I
Sbjct: 249 VFDAYAKIPKLVSHLHLPVQSGSDRILAAMKRGYSVLEFKSVVRKLRAARPDLSLSSDFI 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              P +T   +E  ++       D    +  +   GT 
Sbjct: 309 VGFPGETEEDFEKTMKLIDEVGFDASFSFVYSPRPGTP 346


>gi|327462036|gb|EGF08365.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK1057]
          Length = 315

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKQAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIICDQLEIIPEHIVIH 266


>gi|240139952|ref|YP_002964429.1| tRNA modification enzyme MiaB, putative isopentenyl-adenosine A37
           tRNA methylthiolase [Methylobacterium extorquens AM1]
 gi|240009926|gb|ACS41152.1| tRNA modification enzyme MiaB, putative isopentenyl-adenosine A37
           tRNA methylthiolase [Methylobacterium extorquens AM1]
          Length = 446

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 74/227 (32%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              + + + E + + +  G R I+    ++    G    
Sbjct: 157 CDK---FCAFCVVPYTRGAEVSRSVAAVVDEARRLVE-GGVREITLIGQNVNAYHGDGPD 212

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P  +  ++D ++    +      T  ++P+    +    +      +  + L VQS  
Sbjct: 213 GAPATLGHLMDALSAVPGLLRLRYTT--SHPNDFADDLIAAHATNPLVMPYLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  + R H        I   RN  P +  S D I   P +T   +   ++       
Sbjct: 271 DGILHAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETMRLVSDIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                ++ +   GT   +        + +E +A     L +   + +
Sbjct: 331 SAAFSFKYSPRAGTPAAEREDAVPEAVKTERLAALQDLLDRQRHAYN 377


>gi|56708793|ref|YP_164834.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ruegeria
           pomeroyi DSS-3]
 gi|56680478|gb|AAV97143.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria pomeroyi DSS-3]
          Length = 462

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 76/238 (31%), Gaps = 28/238 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F                  L E   + +  G R I+ +      + G  P+
Sbjct: 182 CDK---FCAFCVVPYTRGAEVSRPADRILREANELVER-GVREITLLGQNVNAYHGAGPN 237

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQS 139
                    +   I +   +     I     +P+ +  +  + +      +  + L VQ+
Sbjct: 238 -----GDMTLAGLIWELDKIDGLERIRFTTSHPNDMADDLIEAHGTCAKLMPYLHLPVQA 292

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R+H A   +  I   R   P +    D I   P++T   ++  L      
Sbjct: 293 GSDKILKRMNRSHTAESYLRLIERIRAARPDIVMSGDFIVGFPEETEADFQDTLDLVEQV 352

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +   ++ +   GT   +  +             +  +  Q + +    H  EI +
Sbjct: 353 RYGYAYSFKYSTRPGTPAAERAQVDP---------AEADDRLQRLQAVITRHQREIQD 401


>gi|315122124|ref|YP_004062613.1| 2-methylthioadenine synthetase (miaB-like) protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495526|gb|ADR52125.1| 2-methylthioadenine synthetase (miaB-like) protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 457

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  I   L+++    +      +  I   G   +    +
Sbjct: 174 CDKFCTFC-----VVPYTRGAE--ISRSLSQIVEEARKLVASGVREITLLGQNVNAWCGK 226

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNR--ISLGVQSL 140
            +        D +     + S + +     +P  +     + + +  +    + L VQS 
Sbjct: 227 GLNGQKCNFSDLLYSLADIKSLIRLRYTTSHPRDMSDCLIKAHGELDILMPYLHLPVQSG 286

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H   E    I   R+I P ++   D I   P +  + +E  +    +  
Sbjct: 287 SDRILKSMNRRHTVYEYQQIIDRIRSIRPNIAISSDFIVGFPGERDSDFEGTMNLVENIG 346

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
                 ++ +   GT    M
Sbjct: 347 YAQAFSFKYSPRPGTPGANM 366


>gi|254417885|ref|ZP_05031609.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Brevundimonas sp. BAL3]
 gi|196184062|gb|EDX79038.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Brevundimonas sp. BAL3]
          Length = 472

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 22/231 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSI-----FFGGGT 80
           C K C +C     V  Y  G E + +   + ++  R L G   R ++ +      + G  
Sbjct: 176 CDKFCTFC-----VVPYTRGAE-WSRPLASVLEEARALAGRGVREVTLLGQNVNAYDGER 229

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY--RKAGVNRISLGV 137
           P        + +++       +     I     +P+ +  +    +    A +  + L V
Sbjct: 230 P----DGRKSSLVELAYALAEIPGLDRIRYTTSHPNDMSDDLIAAHGDLDALMPYLHLPV 285

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+  ++ LR + R H        I   R   P ++   D I   P +T  ++E  L    
Sbjct: 286 QAGSDRILRLMNRKHGRQTYFDLIDRIRATRPDIAMAGDFIVGFPGETDREFEDTLDLVR 345

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
                    +  +   GT    M K  +  +  + +   +  LT+   + +
Sbjct: 346 RVNYASAFAFMYSPRPGTPAAGMGKQVEPEVAKDRLHRLIELLTEQQIAFN 396


>gi|193211917|ref|YP_001997870.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobaculum
           parvum NCIB 8327]
 gi|229890476|sp|B3QR49|MIAB_CHLP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|193085394|gb|ACF10670.1| RNA modification enzyme, MiaB family [Chlorobaculum parvum NCIB
           8327]
          Length = 443

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 15/197 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     V     G+E  + +F   +  +  L           G    S  +  
Sbjct: 156 CNNHCAFC-----VVPVTRGRERSV-AFDRVIAEVAALEQAGYREVTLLGQNVNSWCDAD 209

Query: 88  ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEE 142
              + A +L+G++           T  ++P  +  +  +    R      I L VQS   
Sbjct: 210 KSLDFAGLLEGVSHAAPSMRIRFTT--SHPKDISESLVRVIGERPNLCKHIHLPVQSGSS 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H   E +  I + R + P ++   DLI     +T       L    +   D
Sbjct: 268 RMLDLMKRGHTREEYLDKIAMIRELVPGVAITTDLIAGFCTETEVDHRETLSLMEAVGYD 327

Query: 201 HLSLYQLTIEKGTLFYK 217
              ++  ++  GT   +
Sbjct: 328 TAFMFYYSVRPGTWAAR 344


>gi|126699844|ref|YP_001088741.1| radical SAM superfamily lipoprotein [Clostridium difficile 630]
 gi|115251281|emb|CAJ69112.1| putative radical SAM superfamily lipoprotein [Clostridium
           difficile]
          Length = 285

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 24/248 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + K  +   ++    E+   R+    + +  IF   G   +I  
Sbjct: 21  CSHNKCTFCS----MYKSKKFKIKPLEVIKNEIDIFRRYY--KHVERIFLADGDALIIPM 74

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  I+  +           IT+  +P S+E    +  +  RK GV  I LG++S   +
Sbjct: 75  EKLRDII--LYIKEVFPECERITMYGSPKSIEKKSDDELKELRKLGVKMIYLGLESGSNE 132

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +  ++ + I      +    ++S  +I  L    +T        +   + + D+
Sbjct: 133 VLEDIKKGFSSEQLIKVGRKVKKSGIKLSATVIAGLGGTKKTHQHAVDTGKMLGAISPDY 192

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +  L +E  T  Y      DL+   E   ++   + Q I          I  +  +  
Sbjct: 193 VGVLSLMVEPNTELY------DLLKAGEFTILEDKAVLQEIKEMIKN----IDANEKIVF 242

Query: 262 ESLHNLNY 269
            S H  NY
Sbjct: 243 RSNHASNY 250


>gi|73748729|ref|YP_307968.1| MiaB family tRNA modification protein [Dehalococcoides sp. CBDB1]
 gi|147669495|ref|YP_001214313.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1]
 gi|73660445|emb|CAI83052.1| tRNA modification enzyme, MiaB family [Dehalococcoides sp. CBDB1]
 gi|146270443|gb|ABQ17435.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1]
          Length = 416

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 14/225 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   F   VRRYK  +   +   ++E+   +       + +    G   S   
Sbjct: 137 CDNFCTYCIVPF---VRRYKNCRG--VDDIISEINLRQAEGYQEIVLTGTEIGEYTS--S 189

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQS 144
             N+A +++ I +   +      +++  P+ + +     ++     N   + +QS  ++ 
Sbjct: 190 GFNLAGLIEAILERTRIPRLRLSSLQ--PNEITLPLLALWKNRRLCNHFHMALQSGSDRI 247

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R ++ ++    +   R   P ++   D+I   P +T   +   L+         +
Sbjct: 248 LGLMNRPYSLTDYTRTLEAIRRQIPDVAVTTDMIVGFPGETDEDFACSLKYVEQAGFARV 307

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +  +   GT+  ++    D V+    ++  +     +      
Sbjct: 308 HPFPYSERPGTMASQLTDKVDPVVIKTRLSGMMLAAKNASLEYRH 352


>gi|218782940|ref|YP_002434258.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764324|gb|ACL06790.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 470

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 12/210 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTP-SLIE 85
           C  +C +C  N  V    + + + ++  + E++ +   TG   +   +F     P +  +
Sbjct: 206 CPYRCYFCAQN--VMSPTLRRRDMVK-VVDEIEKVHHETG---VDLFWFCDAIFPLTQKD 259

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +     +        +   ++   E     V+    +  ++AG++ +  G++S + + L
Sbjct: 260 AEVFCREMTER----GLHKKIQWITETRVDLVDRPLLRMLKQAGLSMVLFGLESGDREVL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +         A+  AR          +  LP +T    E  +  A    +D     
Sbjct: 316 SRIKQGVTLEAGAKAVAAARAEGVTTLGLFMLGLPGETRQTMEKTIGFAQRIGLDFAKFN 375

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           +     G+ F+        + P E  + + 
Sbjct: 376 RAAPYPGSKFFDDVYAARDLPPWEMFSANY 405


>gi|163787659|ref|ZP_02182106.1| hypothetical protein FBALC1_03932 [Flavobacteriales bacterium
           ALC-1]
 gi|159877547|gb|EDP71604.1| hypothetical protein FBALC1_03932 [Flavobacteriales bacterium
           ALC-1]
          Length = 481

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 69/209 (33%), Gaps = 19/209 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQE--NFIQSFLTEMQWMRQLTGPRSISSIFFGGGT--- 80
           C   C +C   F     R +  Q     I     +      L G    S +++GGG    
Sbjct: 178 CDNMCTFCVVPFTRGRERSRDPQSIIEEINDLWAKGFKEITLLGQNVDSYLWYGGGLKKD 237

Query: 81  ---PSLI---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
               + +      N A +L+  AK          T  +NP    ++  +   K       
Sbjct: 238 FDKATDLQKATAVNFASLLELAAKAQPKMRIRFST--SNPQDFTLDVIETMSKYDNICKH 295

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           I L VQS  ++ L+ + R H   E    I   R I P  S   DLI   P +     +  
Sbjct: 296 IHLPVQSGSDRILKEMNRLHTREEYFELIDNIRRIIPECSISQDLIAGFPTENEQDHQDT 355

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           L        +   ++  +   GT+  +  
Sbjct: 356 LSLMEYVKYNFGYMFTYSERPGTMAGRKM 384


>gi|99082650|ref|YP_614804.1| MiaB-like tRNA modifying enzyme [Ruegeria sp. TM1040]
 gi|99038930|gb|ABF65542.1| MiaB-like tRNA modifying enzyme [Ruegeria sp. TM1040]
          Length = 421

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 25/219 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDKGYNEVVLTGVDLTSWGADLP 204

Query: 82  SLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           +   P     +  IL  +     +  +   +IE     V+ N  Q        +  + L 
Sbjct: 205 A--SPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLS 257

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H   +AI     AR +        D+I   P +T + +E  L+  
Sbjct: 258 LQHGDDLILKRMKRRHLRDDAIRFTEEARKLRPQMTFGADIIAGFPTETESHFENSLKLV 317

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
               +  L ++  +  +GT   K+    +  +  E  A 
Sbjct: 318 TECDLTWLHVFPYSKREGTPAAKIPSQVNGNVIKERAAR 356


>gi|293400696|ref|ZP_06644841.1| Fe-S oxidoreductase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305722|gb|EFE46966.1| Fe-S oxidoreductase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 441

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 71/200 (35%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPS 82
           C + C YC     +   +  + +  +  + ++      +G + I      +  +G    +
Sbjct: 153 CNQFCSYC----IIPYARGAERSLPEDEVIKIAQDLCASGHQEIVLSGIHTGRYGRDINT 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +    +   +    +   +      +IE N   +        +K       + + +QS 
Sbjct: 209 NLT--QLMKRM--CKEVKGLRRIRISSIEMN--EISDELLTFMQKEPKIARHLHIPIQSA 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R ++       +   R++ P +S   D+I   P+++  Q+   ++      
Sbjct: 263 NNEVLKNMHRPYDVEWFKERVKYIRSLMPDISISSDVIVGFPQESEEQFVDTMENIKQME 322

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           +  L ++  +    T+   M
Sbjct: 323 LSFLHIFPYSRRDHTVAATM 342


>gi|288941935|ref|YP_003444175.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Allochromatium vinosum DSM 180]
 gi|288897307|gb|ADC63143.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Allochromatium vinosum DSM 180]
          Length = 560

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 28/214 (13%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C       ++K  ++  +++    +  + +L    
Sbjct: 187 YIYIPLGVPVATPNMARGCPFTCSFCS------QWKFWRDYRVRNPKRMVDEIEELVKVH 240

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS----SVEVNNFQGY 125
            +         P       I   +        +  ++ I    N        + +    Y
Sbjct: 241 GVGFFILADEEP------QINKKMFIEFCQELIDRDLGIHWGINTRVTDVMRDEDLLPFY 294

Query: 126 RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185
           RKAG+  ISLG ++  + +L    +     +   AI L +          I  L  +T  
Sbjct: 295 RKAGLVHISLGTEAAAQLNLDRFVKETTIEQNKRAIQLLQKNGIVTEAQFIVGLENETRE 354

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             E   Q  + +  D  +    T    +  +   
Sbjct: 355 TLEETYQMVMDWGADMANWSMYTPWPFSDMFAEM 388


>gi|221488386|gb|EEE26600.1| Radical SAM domain-containing protein, putative [Toxoplasma gondii
           GT1]
          Length = 867

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 73/231 (31%), Gaps = 23/231 (9%)

Query: 32  CPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C YC    H R       +E   +     ++   +     S  S  +G    S +    +
Sbjct: 577 CTYCK-TKHARGDLGSYPEEAIEKRVEASLEEGVKQIWLTSEDSGAYGLDRQSSLTG-LL 634

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--------VNRISLGVQSLE 141
           A +L  +      SS +     +NP  +     Q  + A            + L +QS  
Sbjct: 635 ARLLRNVFDRKADSSLMLRVGMSNPPFL----LQQLKSAVQVFSHPNVFEFLHLPLQSGS 690

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L  + R + A +    +      FPRM+   D+I   P +T    E  L     +  
Sbjct: 691 NDVLLAMNREYTAEQFEVVVETLLKHFPRMTIATDIICGFPGETDEDHERTLAIIRKFKF 750

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +++ Q     GT    M       LPS+ V      +T    S      
Sbjct: 751 PVVNISQFYPRPGTPAASM-----KQLPSQVVKRRSREVTALFESYTCYDW 796


>gi|237833257|ref|XP_002365926.1| radical SAM domain-containing protein [Toxoplasma gondii ME49]
 gi|211963590|gb|EEA98785.1| radical SAM domain-containing protein [Toxoplasma gondii ME49]
 gi|221508888|gb|EEE34457.1| Radical SAM domain-containing protein, putative [Toxoplasma gondii
           VEG]
          Length = 867

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 73/231 (31%), Gaps = 23/231 (9%)

Query: 32  CPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C YC    H R       +E   +     ++   +     S  S  +G    S +    +
Sbjct: 577 CTYCK-TKHARGDLGSYPEEAIEKRVEASLEEGVKQIWLTSEDSGAYGLDRQSSLTG-LL 634

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--------VNRISLGVQSLE 141
           A +L  +      SS +     +NP  +     Q  + A            + L +QS  
Sbjct: 635 ARLLRNVFDRKADSSLMLRVGMSNPPFL----LQQLKSAVQVFSHPNVFEFLHLPLQSGS 690

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L  + R + A +    +      FPRM+   D+I   P +T    E  L     +  
Sbjct: 691 NDVLLAMNREYTAEQFEVVVETLLKHFPRMTIATDIICGFPGETDEDHERTLAIIRKFKF 750

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +++ Q     GT    M       LPS+ V      +T    S      
Sbjct: 751 PVVNISQFYPRPGTPAASM-----KQLPSQVVKRRSREVTALFESYTCYDW 796


>gi|153852707|ref|ZP_01994144.1| hypothetical protein DORLON_00126 [Dorea longicatena DSM 13814]
 gi|149754349|gb|EDM64280.1| hypothetical protein DORLON_00126 [Dorea longicatena DSM 13814]
          Length = 356

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 11/191 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +R+       +  S    ++  ++        +    GG       
Sbjct: 71  YCKNDCLYCG----IRKSNGNAHRYRLSEADILKCCKE-GYELGFRTFVLQGGEDGYYTD 125

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  ++  I + +      +  I  +      +++Q Y  AG +R  L  ++   +  R
Sbjct: 126 ERIIHLIRIIKERYP-----DCAITLSIGEKSKDSYQAYYDAGADRYLLRHETYNHEHYR 180

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L   + +       +   ++I  ++    +   P QT      ++          + + 
Sbjct: 181 KLHPPNLSPEHRQQCLRDLKDIGYQIGCGFMVGSPYQTSEHLAEDMLFMKELNPHMIGIG 240

Query: 206 QLTIEKGTLFY 216
                  T F 
Sbjct: 241 PFIPHHDTPFA 251


>gi|315924546|ref|ZP_07920765.1| TIGR01212 family radical SAM protein [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622076|gb|EFV02038.1| TIGR01212 family radical SAM protein [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 335

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 52/162 (32%), Gaps = 9/162 (5%)

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-----ISLG 136
           + +        +     N      V I I   P  V        +           I LG
Sbjct: 112 TYLPFDQFKKNIAACLGN----DVVGIAISTRPDCVTNQQIDWLKDFKQQHHIDIVIELG 167

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS    SL+ L R H  ++ I A    ++   ++   +I  LP           +    
Sbjct: 168 LQSANAHSLQKLNRGHGLADYIDAALRIKSAGLQLCTHMILDLPWDDDLDIIEGAKLLSV 227

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              D +  + L IEKGT   KM    ++ L S    +    L
Sbjct: 228 VKNDFVKCHSLYIEKGTELAKMIASKEVHLLSLETYLHRAKL 269


>gi|291560933|emb|CBL39733.1| Fe-S oxidoreductase [butyrate-producing bacterium SSC/2]
          Length = 289

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 18/237 (7%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + +C +C     + + K  +   ++  L ++Q  R     R +  IF   G   + + 
Sbjct: 25  CSQNRCIFCS----MFKEKRFRIRKVEEVLEDLQDARN--KYRYVEKIFLADGDALICKM 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL  I          ++T+  +P S+   +  +    R+ G++ I +G++S  ++
Sbjct: 79  TDLESILHFIKDQ--FPECKQVTLYGSPRSILMKQQEDLDKLRELGISMIYMGLESGNDE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            L ++ +   + E I A    +    R+S   I  L  + +     +           D+
Sbjct: 137 VLTYMKKGVTSQEMIEAAQKVKQAKIRLSVTAISGLGGRRLWKEHAKDTGLVLSQMKPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH-GLHAYEISNHS 257
           + L  L IE+        + G+  L +    +     T+ +            SNH+
Sbjct: 197 IGLLTLMIEEDLPLADKIRSGEFELLNPYDILIE---TKEMLKYMDCPDCIFRSNHA 250


>gi|260655072|ref|ZP_05860560.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Jonquetella anthropi
           E3_33 E1]
 gi|260630183|gb|EEX48377.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Jonquetella anthropi
           E3_33 E1]
          Length = 432

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 22/202 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C   C YC                 +  L E++ +    G + I+ +      +G   P 
Sbjct: 151 CDNFCTYC---IVPYVRGRFASRPAEEILAEVRSLVA-GGAKEITLLGQNVDTWGLDCPG 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            +   ++  ++            VE    + + P+   V+  +   +       I+L +Q
Sbjct: 207 GMRFADLLELVA-------REPGVEWLRFMTSYPTDFTVDVVETMVRHSNICPSINLPIQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           +  E+ LR + R ++  E    + L R+  P +    DLI   P +T  +++  L     
Sbjct: 260 AGSERVLRAMNRRYSLEEYADTMKLIRDGLPEVGLTSDLIVGFPGETEEEFQCSLAALER 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
           +  D +     +  +GT   KM
Sbjct: 320 FRFDMVHTAAYSPRQGTPAAKM 341


>gi|295109586|emb|CBL23539.1| MiaB-like tRNA modifying enzyme [Ruminococcus obeum A2-162]
          Length = 438

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC            +   I   L E++ +        + +   G    S     
Sbjct: 154 CNQFCTYC---IIPFARGRVRSRKIADVLREVETLASKGYKEVVLT---GIHLSSYGVDF 207

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +    +L  I     V+    I +    P  +     +G    G       L +QS  
Sbjct: 208 PKEERESLLSLIQAVSKVAGIQRIRLGSLEPRIITEEFLEGIVATGKVCPHFHLSLQSGC 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++L+ + R ++A E      L R  +  P ++ D+I   P +T   +E   +   +   
Sbjct: 268 NKTLKNMNRRYSAQEYAEKCELIRKYYPAPALTTDVIVGFPMETEEDFEESYEFVKNIHF 327

Query: 200 DHLSLYQLTIEKGTLFYKM 218
               +++ +   GT    M
Sbjct: 328 YETHIFKYSRRHGTKAAAM 346


>gi|194365135|ref|YP_002027745.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Stenotrophomonas maltophilia R551-3]
 gi|229891008|sp|B4SQK7|MIAB_STRM5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|194347939|gb|ACF51062.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Stenotrophomonas
           maltophilia R551-3]
          Length = 472

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 73/218 (33%), Gaps = 21/218 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--- 64
           + +    ++    +V     C K C +C       R       F    +   Q   Q   
Sbjct: 167 DRLPEPRADGASAFVSIMEGCSKYCSFC--VVPYTRGTEVSRPFEDVVVEVAQLAAQGVR 224

Query: 65  ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L    +     +G G        ++ L++  IA+   V      T  ++P     +
Sbjct: 225 EINLLGQNVNAYRGPYGDGEF-----ADLGLLIRTIAEIDGVGRIRFTT--SHPLEFSDS 277

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
               +R      N + L VQ+  ++ L  + R + A E  + I   R + P +S   D I
Sbjct: 278 LIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFI 337

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              P +T   +E  ++       DH   +  +   GT 
Sbjct: 338 VGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTP 375


>gi|87310727|ref|ZP_01092854.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM
           3645]
 gi|87286484|gb|EAQ78391.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM
           3645]
          Length = 432

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 64/207 (30%), Gaps = 19/207 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C+ +C +C          V  E + +S    +  + +L            I    +G   
Sbjct: 142 CLLRCTFC------IIPTVRPEMYSRSSEEIIAEVARLADNGFREIVLTGIHLGHYGVDQ 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG---VNRISLG 136
                      +   +     +  +  I +     + V     +   +        + + 
Sbjct: 196 NRGKSKAEWMRLAHLVRSLARLDGDFRIRMSSIEATEVTRELIEVMGEFPDRVCPHLHIS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRA 194
           +QS  +  LR + R   A   +    L +     P +S D+I   P +T  ++E     +
Sbjct: 256 MQSGSDSVLRRMRRRWGAQRFVDRCKLLQTSLDQPAISTDIIVGFPGETEAEFEETCAVS 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                  + ++  +  KGT   +M   
Sbjct: 316 REVGFSKIHIFPFSPRKGTPAAEMPDH 342


>gi|58697143|ref|ZP_00372571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536553|gb|EAL59910.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 384

 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 73/232 (31%), Gaps = 23/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQ-------LTGPRSISSIFFGGG 79
           C K C +C                +     E ++ +         L    +       G 
Sbjct: 100 CDKFCTFC---VVPYTRGAEYSRPVNEIFREALKLVANGANEINLLGQNVNAYHGECEGE 156

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                   ++  ++  IAK   +      T  ++P  +  + +  + +    +  + L V
Sbjct: 157 V------WDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLAHAEEPKLMPFVHLPV 208

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R H A E +  I   R + P +  S D I   P +T   +E  ++   
Sbjct: 209 QSGSNKILHAMNRKHTAEEYLEIIDRFRKLKPEIEFSSDFIVGFPGETEKDFEETMKLVE 268

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                    ++ +   GT   +        + +E +      +++     + 
Sbjct: 269 KVRYAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQKLISKQQLEFNQ 320


>gi|322379427|ref|ZP_08053797.1| conserved hypothetical ATP-binding protein [Helicobacter suis HS1]
 gi|322380962|ref|ZP_08055028.1| MiaB-like protein [Helicobacter suis HS5]
 gi|321146634|gb|EFX41468.1| MiaB-like protein [Helicobacter suis HS5]
 gi|321148136|gb|EFX42666.1| conserved hypothetical ATP-binding protein [Helicobacter suis HS1]
          Length = 435

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 82/228 (35%), Gaps = 19/228 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI---SSIFFGGGTPS 82
           C K C YC     +  +  G+E  I     L E + + +      +    ++   G   S
Sbjct: 150 CDKHCTYC-----IVPHTRGKEISIPMDLILKEAEKLTKQGVKEILLLGQNVNNYGVRFS 204

Query: 83  LIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           +  P+ N + +L+ +++   +          +P  ++    + + +       I + +QS
Sbjct: 205 IKHPKVNFSALLENLSQIEGLKRIRF--TSPHPLHMDNAFLECFARNPKVCKSIHIPLQS 262

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L+ + R ++    +  I   +++ P +    D+I   P +T   +E  L+     
Sbjct: 263 GSNAILKAMKRGYSKEWYLDRITRLKSLVPNVGISTDIIVGFPGETQQDFEQTLEVLEQV 322

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
             D L  +  +    T  Y + K  + +       +   +  + I   
Sbjct: 323 RFDTLYSFIYSARPLTPAYHLEKVPENIAHHNLERLQSRH--REILEQ 368


>gi|301064673|ref|ZP_07205062.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium
           NaphS2]
 gi|300441215|gb|EFK05591.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium
           NaphS2]
          Length = 439

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYC--------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC        +F           E  I   + E+  + Q               
Sbjct: 157 CNNFCSYCIVPYVRGREFFRAPEDILEEAEYLISEGIREITLLGQNVNSYVWKKNHNNWN 216

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             SL+    +A +   +   +T S   + + E       +    G        I L  Q+
Sbjct: 217 FSSLL--YELAELDHLLRLRFTTSHPKDFSDELLACFAHIEKLAG-------HIHLPFQA 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R +   + +A I   +     ++   D++   P +T   ++  L      
Sbjct: 268 GSNRILKSMRRGYTREQYLAIIRKIKTCKEDIAITSDVMVGFPGETEEDFQFTLDLIEQV 327

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D L  ++ +  +GT   +M
Sbjct: 328 QFDSLFSFKYSDREGTPAAEM 348


>gi|229825044|ref|ZP_04451113.1| hypothetical protein GCWU000182_00394 [Abiotrophia defectiva ATCC
           49176]
 gi|229790791|gb|EEP26905.1| hypothetical protein GCWU000182_00394 [Abiotrophia defectiva ATCC
           49176]
          Length = 464

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 31/271 (11%)

Query: 3   YLSAYENNMTGQ-----GSNSLGVYVHW-PFCVKKCPYC-------DFNSHVRRYKVGQE 49
           Y+   +    G+      +  +  Y+     C K+C YC       +F S      + + 
Sbjct: 129 YIEDLDRLAGGEEVRLVPAGEISSYIKIAEGCNKRCTYCIIPYIRGNFRSIPMETIIKEA 188

Query: 50  NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
             + +     + +  +    ++      G        + +  ++  ++K   +       
Sbjct: 189 ESLAA--QGTKELLLVAQETTLYGTDIYG-------KKALPDLVHELSKISGIEWIR--L 237

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +   P  +        +      + I L +Q   +  L+ + R  N +E    I   R  
Sbjct: 238 LYCYPEEITDEIIYAIKNEKKVCHYIDLPIQHSSDSILKRMARRTNQAELRERIAKLREE 297

Query: 168 FPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P ++    LI   P +T   ++           D L ++  + E+GT   +M    D  
Sbjct: 298 IPDITLRTTLITGFPGETEDDFKELYNFVDEMEFDRLGVFTYSAEEGTPAAEMENQIDEE 357

Query: 226 L---PSENVAVDLYNLTQSITSAHGLHAYEI 253
           +       +      ++           YE+
Sbjct: 358 VKVARRNEIMELQQEISAEKAEGRIGKVYEV 388


>gi|257065138|ref|YP_003144810.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256792791|gb|ACV23461.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 293

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 10/192 (5%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     V R+ V     I++ L E++ M          +I    G P  +  
Sbjct: 25  CTHNKCKFCTMYKGV-RFDVRSIEDIEADLAELRTMVPHA-----RTIQLLSGNPLALPY 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  IL+ I +       V       +  +  V   +  ++ G+  +SLGV+S ++ +L
Sbjct: 79  SRLKPILEKINEYLPDMEYVYTAGRVTDLRNKTVEQLRELKELGLREVSLGVESGDDWTL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
             + + ++A + I                 +  +     +        +         + 
Sbjct: 139 DRVNKGYHAEDIIEQCGKLTEAGIDFWMSFLNGVAGRSHSRDHAIHSAEIFSQCKPMLVG 198

Query: 204 LYQLTIEKGTLF 215
              LT+  GT  
Sbjct: 199 TGGLTLFPGTPL 210


>gi|300855378|ref|YP_003780362.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528]
 gi|300435493|gb|ADK15260.1| putative Fe-S oxidoreductase [Clostridium ljungdahlii DSM 13528]
          Length = 570

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 113/366 (30%), Gaps = 46/366 (12%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC YC     F       +  ++        +++ ++     R+ +           
Sbjct: 196 CPFKCKYCLSSASFEVRFLNIERVKKELKFLMDKDIKLIK--FVDRTFNC---------- 243

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
               N    ++         ++V    E +   ++    +    A   RI L  GVQ+  
Sbjct: 244 ----NYEFAMEIWKFVINADTDVTFHFEISADVLKDEEIKLLNTAPKGRIQLEVGVQTTN 299

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  + R    +     +   +     ++   DLI  LP +    ++       S   
Sbjct: 300 DTVLNNINRYVKFNYIYDRVKKVQKYH-NINQHLDLIAGLPGEDFESFKKSFNDVYSIKP 358

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + L L  L + KG+   +      +V         L   + S      L   E     + 
Sbjct: 359 EALQLGFLKLLKGSSMIEEVSKWGMVYSPYAPYEILKTDSISYDEIVILKRIEEVFDKYY 418

Query: 260 GAESLHN-LNYW------RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG 312
            +    N LNY+       +  Y  +G     +       +  +I      + K+  +  
Sbjct: 419 NSGKFKNILNYFVPKFKTAFDFYYELG-----KFFYNKGYLNKNISS--SDYYKVFIE-- 469

Query: 313 HAVVEKEFLSSEQQADEFLMM--GLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIER 370
               E E L+ +    E ++    L+  +   + D+ M      + +  +     GFIE 
Sbjct: 470 ---FENECLNEKNIELEEIIKYDYLKFNKKKWLPDFLMRERNKEEEKTIKAKIEDGFIEV 526

Query: 371 VQFSRL 376
            +   +
Sbjct: 527 SKKYHI 532


>gi|110802813|ref|YP_698932.1| radical SAM domain-containing protein [Clostridium perfringens
           SM101]
 gi|110683314|gb|ABG86684.1| radical SAM domain protein [Clostridium perfringens SM101]
          Length = 559

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 25/203 (12%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R          + L       +    DLI  LP + +  ++           
Sbjct: 287 NEVLHNINRYITYENIKEKV-LKVAAGKNVMQHLDLIAGLPGEDLESFKKSFNDVHDIRP 345

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
           D + L  L + KG+   +  K  
Sbjct: 346 DEIQLGFLKLLKGSSMREEAKKW 368


>gi|294496305|ref|YP_003542798.1| MiaB-like tRNA modifying enzyme [Methanohalophilus mahii DSM 5219]
 gi|292667304|gb|ADE37153.1| MiaB-like tRNA modifying enzyme [Methanohalophilus mahii DSM 5219]
          Length = 406

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 74/203 (36%), Gaps = 20/203 (9%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIF-- 75
           +H       C  +C YC     V   +    +F   S +T+++            +    
Sbjct: 118 IHICQISQGCNNRCSYC----IVTLARGPLYSFDADSIVTDIEQAVYEGCSEVWLTSQDN 173

Query: 76  FGGGTPSLIEPQ-NIALILDGIAKNW-TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
              G    ++ + ++  +L+ I          V +   A+   +     + Y    V ++
Sbjct: 174 AQYG----MDKEIHLPALLERITAIPGDFRVRVGMMNPASTLGILDELLRAYSSEKVYKV 229

Query: 134 -SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
             L +QS  ++ L  + R H   +A   +   RN FP  +   D+I   P +    +E+ 
Sbjct: 230 LHLPIQSASDKILEKMRRKHTMEQANFIVEKFRNAFPESTLFTDIIVGFPGEDEEDFELT 289

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
           L    +Y  D +++ + T    T
Sbjct: 290 LDWIRTYHPDKVNISRYTPRPHT 312


>gi|292670946|ref|ZP_06604372.1| MiaB family RNA modification enzyme [Selenomonas noxia ATCC 43541]
 gi|292647567|gb|EFF65539.1| MiaB family RNA modification enzyme [Selenomonas noxia ATCC 43541]
          Length = 442

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 66/203 (32%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C  +C +C        F S V    V +   + +  + E+  + Q +    +  ++    
Sbjct: 154 CDHRCAFCAIPLIRGSFRSRVMEDVVAEAEHLAAQGVRELVLIAQDSANYGLD-LYEKPM 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P+L+    +  I D               + + P        + +      V  + L +
Sbjct: 213 LPALLRA--LTKIKDIAWIR---------VLYSYPKYFSDELIEVFATEPKVVKYVDLPL 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  LR + R          I   R   P ++     I   P +T T ++       
Sbjct: 262 QHAHDAVLRSMNRPDTREGVEKLIKRLRERIPGVAIRSTFIVGFPGETDTHYQALRSFVE 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
           +   D + ++  + E+ T   KM
Sbjct: 322 AQRFDKVGIFTYSEEEDTPAAKM 344


>gi|147921177|ref|YP_685012.1| Fe-S cluster-binding oxidoreductase [uncultured methanogenic
           archaeon RC-I]
 gi|110620408|emb|CAJ35686.1| predicted Fe-S cluster-binding oxidoreductase [uncultured
           methanogenic archaeon RC-I]
          Length = 481

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 50/153 (32%), Gaps = 4/153 (2%)

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
             IFF   T +  + +N         +      N+     A   +++    +  ++AG +
Sbjct: 254 REIFFRDETFTFFKDRN----KKFCEELINRKYNLSWIANARVGTIDYETARLMKQAGCH 309

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I +GV+S  ++ L  + +            + +         ++   P +T    +  L
Sbjct: 310 TIKIGVESGVQRILNNIKKGITVENTKKTFKILKEAGIDTHAHMMIGCPGETRETIDETL 369

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +         +++   T   GT  + +      
Sbjct: 370 KFIKEICPTTVTMAICTPYPGTELFDIIMREHP 402


>gi|299140666|ref|ZP_07033804.1| 2-methylthioadenine synthetase [Prevotella oris C735]
 gi|298577632|gb|EFI49500.1| 2-methylthioadenine synthetase [Prevotella oris C735]
          Length = 446

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 83/254 (32%), Gaps = 17/254 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I S + + +      G   + + +  G    +    
Sbjct: 164 CNYFCTYC---TIPYARGFSRNPSIASLVAQAEEAAAEGGKEIVLTGVNIGHFGET--TH 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
           +    ++  + K   +      ++E  P  ++ +      +  A +    + +QS  +  
Sbjct: 219 EKFIDLVKALDKVEGIKRFRISSLE--PDLIDDDLIAFCAESRAFMPHFHIPLQSGSDAV 276

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++ +     I L + + P   +  D++     +    +E   Q      V  L
Sbjct: 277 LKLMHRLYDTALFAHKIELIKKLMPDAFIGVDVMVGSRGEKPEYFEDCYQFLAHLPVTQL 336

Query: 203 SLYQLTIEKGTLFYKMHK---DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++  +   GT    +     + D  L S+ +       TQ           E+      
Sbjct: 337 HVFPYSERPGTSALSIPYVVEEKDKKLRSKRLLALSDTKTQDFYQQFIGTEREVLFEKAP 396

Query: 260 GAESLH--NLNYWR 271
             +++H    NY R
Sbjct: 397 RGKAMHGFTDNYIR 410


>gi|288871519|ref|ZP_06117908.2| radical SAM domain protein [Clostridium hathewayi DSM 13479]
 gi|288863143|gb|EFC95441.1| radical SAM domain protein [Clostridium hathewayi DSM 13479]
          Length = 359

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     E + +    E+    +        +    GG       
Sbjct: 74  YCKNDCYYCG----IRRSNREAERY-RLTEKEILSCCEAGYGLGFRTFVLQGGEDPYFTD 128

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  I+  I + +    +  IT+ A   S    ++Q    AG +R  L  ++ +     
Sbjct: 129 ERLCTIVSSIRQRF---PDCAITLSAGERSF--ESYQRLYDAGADRYLLRHETADRCHYG 183

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +    +AA+   + I  +     +   P QT      +L+    +    + + 
Sbjct: 184 KLHPESMSFDHRMAALRDLKEIGYQTGCGFMVGSPYQTAAMMVKDLRFMKEFGPHMIGIG 243

Query: 206 QLTIEKGTLFYKM 218
                K T F   
Sbjct: 244 PFLSHKDTPFRDR 256


>gi|240139000|ref|YP_002963475.1| hypothetical protein MexAM1_META1p2416 [Methylobacterium extorquens
           AM1]
 gi|240008972|gb|ACS40198.1| conserved hypothetical protein, radical SAM domain protein
           [Methylobacterium extorquens AM1]
          Length = 437

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 11/195 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F          +   +     E + +    G    +++    G    +     A
Sbjct: 203 CPFTCSFCEWGTMESPKRVRAVDHLTQEFEAIA---GHDVYAALLVDAG----LNLNRNA 255

Query: 91  LI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            + L   A+         +  E  P++V   +           + +G+QS +   L  + 
Sbjct: 256 FLNLRRAAEESGFFERHGLICEVYPAAVRQEHLDFLATVRNAYVGIGLQSFDNAVLAHVD 315

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R ++            +    ++ ++I  LP      +    +RA       L +Y   +
Sbjct: 316 RTYDERRFDETFAKL-DAVASLAVEIILGLPGDNPETFRRNFERARRL-PCALRVYHCVV 373

Query: 210 EKGTLFYKMHKDGDL 224
               L  +   +  L
Sbjct: 374 LPSGLMVRSPPEHRL 388


>gi|237723393|ref|ZP_04553874.1| biotin synthase [Bacteroides sp. 2_2_4]
 gi|229447915|gb|EEO53706.1| biotin synthase [Bacteroides sp. 2_2_4]
          Length = 350

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S  + +   +Q        +    GG  S +   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLSRESILNCCKQ-GYELGFRTFVLQGGEDSALTND 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +  I + +      +  I  +        ++ + +AG NR  L  ++  E   R 
Sbjct: 117 QIEMTVARIRQEYP-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETYNELHYRQ 171

Query: 148 LGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   H A  +    +  +   + I  +    ++   P QT+     +L        + + 
Sbjct: 172 L---HPAEMSGKRRLQCLADLKEIGYQTGTGIMVGSPGQTVEHIIEDLLFIEKLRPEMIG 228

Query: 204 LYQLTIEKGTLFYKMH 219
           +        T F +  
Sbjct: 229 IGPFLPHHDTPFAEYP 244


>gi|171780243|ref|ZP_02921147.1| hypothetical protein STRINF_02031 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281591|gb|EDT47026.1| hypothetical protein STRINF_02031 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 311

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                  F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIRDQFYKEIDFMHRKWPEVKKYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  +++ + +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYITELSERMHVTVELGLQTTYDETSKII 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H     +  +   R + P++     LI  LP +        ++R +    +D + L+
Sbjct: 160 NRAHTYDLYVKTVKRLRELAPKVEIVSHLINGLPGENHEMMVENVRRCVTDNEIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S +  V++      I   + +  
Sbjct: 220 LLHLMTSTKMQRDYHEGRLKLLSMDEYVNIICDQLEIIPKNIVIH 264


>gi|83313562|ref|YP_423826.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Magnetospirillum magneticum AMB-1]
 gi|123726842|sp|Q2VYQ8|MIAB_MAGMM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|82948403|dbj|BAE53267.1| 2-methylthioadenine synthetase [Magnetospirillum magneticum AMB-1]
          Length = 438

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 29/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPS 82
           C K C +C     V   +  + +   + +          G R I+ +      + GG   
Sbjct: 160 CDKFCTFC----VVPYTRGAEYSRPAAAVLAEAATLAAGGVREITLLGQNVNGWHGG--- 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E   +  ++  +A+   V      T  ++P  ++    + + +    +  + L VQS 
Sbjct: 213 --EGWGLGRLIRALAEVEGVERIRYTT--SHPRDMDDELIRAHAELPQLMPFLHLPVQSG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H+    +  +   ++  P   +S D I   P ++   +E  +       
Sbjct: 269 SDRILAAMNRGHDRDTYLRLVDKLKSACPDLALSSDFIVGFPGESDADFEASMDLIRRVG 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
                 ++ +   GT    M       +  E +A     L                NH+ 
Sbjct: 329 FVQTYSFKYSPRPGTPAAAMETQVPEAVKDERLAQVQALLLDQTMRF---------NHAC 379

Query: 259 LGAE 262
           +G E
Sbjct: 380 VGRE 383


>gi|160942971|ref|ZP_02090209.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445665|gb|EDP22668.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
           M21/2]
          Length = 431

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C ++C YC      R     +    +S L E+  +    G R +         PS  L  
Sbjct: 152 CNRQCAYC---VIPRARGPVRSRAEESILAELHQLAA-AGYREVVLSAI--SLPSYGLDT 205

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             N+  +++  A+   +      ++  +P  +                +  L +QS    
Sbjct: 206 GTNLVELVEKCAQVPGIERIRLGSL--DPDMLTPEFISRLAAVDKLCPQFHLSLQSGCTA 263

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +LR + R + A +    +   R  +       + D I   P +T   +E           
Sbjct: 264 TLRRMRRVYTAQQYAQVVEQIRAAYGSRPVSFTTDCICGFPGETAENFEESCAFLKKIGF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + ++  +   GT  Y       
Sbjct: 324 LKVHVFPYSRRSGTPAYDFPDQIH 347


>gi|119575831|gb|EAW55427.1| CDK5 regulatory subunit associated protein 1-like 1, isoform CRA_c
           [Homo sapiens]
          Length = 488

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 79/247 (31%), Gaps = 21/247 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 144 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 202 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 255

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 256 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 315

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE----IS 254
              L + Q     GT   KM +    V+      +       S         YE      
Sbjct: 316 FPSLFINQFYPRPGTPAAKMEQVPAQVIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPK 375

Query: 255 NHSFLGA 261
           N +F+G 
Sbjct: 376 NPAFMGK 382


>gi|114605656|ref|XP_001171067.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 488

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 79/247 (31%), Gaps = 21/247 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 144 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 202 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 255

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 256 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 315

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE----IS 254
              L + Q     GT   KM +    V+      +       S         YE      
Sbjct: 316 FPSLFINQFYPRPGTPAAKMEQVPAQVIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPK 375

Query: 255 NHSFLGA 261
           N +F+G 
Sbjct: 376 NPAFMGK 382


>gi|34535972|dbj|BAC87494.1| unnamed protein product [Homo sapiens]
          Length = 487

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 79/247 (31%), Gaps = 21/247 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 144 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 202 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 255

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 256 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 315

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE----IS 254
              L + Q     GT   KM +    V+      +       S         YE      
Sbjct: 316 FPSLFINQFYPRPGTPAAKMEQVPAQVIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPK 375

Query: 255 NHSFLGA 261
           N +F+G 
Sbjct: 376 NPAFMGK 382


>gi|41407381|ref|NP_960217.1| biotin synthase [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|81414426|sp|Q740Q9|BIOB_MYCPA RecName: Full=Biotin synthase
 gi|41395733|gb|AAS03600.1| BioB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 344

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 61/202 (30%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR  ++     I S +   +   +             G     
Sbjct: 80  CPEDCHFCSQSGLFASPVRSARLD----IPSLVEAAKQTAKSGATEFCIVAAVRG----- 130

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +  +    A    V + VEI I  +   +     +   + GV+R +  +++    
Sbjct: 131 -PDERL--LAQVAAGIEAVRNEVEINIACSLGMLTAEQVEQLAEMGVHRYNHNLETARSF 187

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 188 FPNVVT----THTWEERWDTLSMVRDAGMEVCCGGILGM-GETLEQRAEFAAELAELGPD 242

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 243 EVPLNFLNPRPGTPFGDLEVMP 264


>gi|294085157|ref|YP_003551917.1| 2-methylthioadenine synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664732|gb|ADE39833.1| 2-methylthioadenine synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 451

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 60/198 (30%), Gaps = 20/198 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C K C +C       R                + + +       L    +      G G 
Sbjct: 163 CDKFCAFC--VVPYTRGAEYSRPAADVLAEATRLVGRGTREITLLGQNVNAYHGDDGHG- 219

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                  ++  ++  +A+   +      T  ++P  ++      +      +  + L +Q
Sbjct: 220 ----SVWSLGRLIHALAEIDGLERIRYTT--SHPLDMDDELIAAHGNVPQLMPYLHLPIQ 273

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L  + R H+       I   R++ P ++   D I   P ++   +   L     
Sbjct: 274 SGSDRVLDAMNRRHSKDVYFKVIDKLRHVRPDIAMSGDFIVGFPGESDQDFADTLALIDK 333

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   ++ +   GT 
Sbjct: 334 VGYASAYSFKYSPRPGTP 351


>gi|21674804|ref|NP_662869.1| hypothetical protein CT1993 [Chlorobium tepidum TLS]
 gi|81790619|sp|Q8KB05|MIAB_CHLTE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|21648022|gb|AAM73211.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 444

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 22/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     V R +     F +     +   +   G R ++ +  G    S  + +
Sbjct: 163 CNNHCAFC--VVPVTRGRERSVGFERVVAEVVALEKA--GFREVTLL--GQNVNSWRDAE 216

Query: 88  ---NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              + A +L+G+  +  V S       ++P  +     +         N I L VQS   
Sbjct: 217 KGLDFAGLLEGV--SLAVPSMRIRFTTSHPKDISEALVKVIAARPNLCNHIHLPVQSGSS 274

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H   E +  I + R+  P ++   DLI     +T       L    +   D
Sbjct: 275 RMLDLMKRGHTREEYLDRIAMIRSYIPEVAITTDLIAGFCTETEKDHRETLSLMEAVGYD 334

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              ++  ++  GT   +        LP +          Q I       + EI
Sbjct: 335 TAFMFHYSVRPGTWAAR-------NLPDDVPDTVKKARLQEIIELQNAISREI 380


>gi|302339458|ref|YP_003804664.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301636643|gb|ADK82070.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 383

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 21/209 (10%)

Query: 28  CVKKCPYCDF---NSHVR-RYKVGQENFIQSFLTEMQW-----MRQLTGPRSISSIFFGG 78
           C + C YC     N+HV  RY + +E  ++S L   +      + Q    R  + I    
Sbjct: 78  CTQNCRYCGIRRSNTHVSSRYLLDEEEIVESALWCAERGYGSVVLQSGERRDEAFIEL-- 135

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
                   + I   +   +++  +   V IT+     ++    ++ +  AG +R  L ++
Sbjct: 136 -------VERIVKTIKERSRSTELPDGVGITLSVGEQTL--ETYRRFYNAGAHRYLLRIE 186

Query: 139 SLEEQSLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +   +    +          + A+H  R    ++   ++  +P Q++     ++      
Sbjct: 187 TSNPELFSAIHPPEQRFETRLQALHDLRKAGFQVGTGVMIGIPGQSIDMLARDILFFREI 246

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
            VD + +        T            L
Sbjct: 247 DVDMIGMGPYITHPDTPMAVQGMMEKEAL 275


>gi|317131675|ref|YP_004090989.1| RNA modification enzyme, MiaB family [Ethanoligenens harbinense
           YUAN-3]
 gi|315469654|gb|ADU26258.1| RNA modification enzyme, MiaB family [Ethanoligenens harbinense
           YUAN-3]
          Length = 467

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 13/214 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    +VR  +  +    Q      + +       ++          +L    
Sbjct: 183 CNNFCTYC-IVPYVRGREHSRAPE-QVLREAEELLAAGVKDLTLLGQNVNSYGKNLQNDW 240

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           + A +L+ +A            + ++P       F           R+ L  QS  ++ L
Sbjct: 241 DFAKLLEKLAALPG--EFRLHFMTSHPKDASHRLFDTIAANPKISRRLHLPFQSGSDRIL 298

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R + A++    +  A+   P +    D+I   P +T   ++  L         +L 
Sbjct: 299 RQMNRGYTAAQYRELVAYAKAAIPGLCLTSDVIVGFPGETCEDFKQTLALVEEVGFANLY 358

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
            +  +  KGT   +M         +       + 
Sbjct: 359 TFLYSPRKGTPAAEMPD-----PVAREEKARWFE 387


>gi|253571980|ref|ZP_04849385.1| biotin synthase [Bacteroides sp. 1_1_6]
 gi|251838577|gb|EES66663.1| biotin synthase [Bacteroides sp. 1_1_6]
          Length = 345

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 68/191 (35%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S    +   +Q       + +  GG  P ++  +
Sbjct: 62  CRNNCYYCG----IRKGNPNLERYRLSTENILNCCKQGYDLGFRTFVLQGGEDP-VLTDE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  I+  I +++      +  I  +        ++ + +AG NR  L  ++ +++  + 
Sbjct: 117 RIEDIVSTIRRSYP-----DCAITLSLGEKSREAYERFFQAGANRYLLRHETYDKEHYQQ 171

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   ++I  +    ++   P QT+     ++        + + +  
Sbjct: 172 LHPTGMSCEHRLQCLRDLKDIGYQTGTGIMVGSPGQTIKHLIQDILFIEQLRPEMIGIGP 231

Query: 207 LTIEKGTLFYK 217
                 T F +
Sbjct: 232 FLPHGETPFAQ 242


>gi|189463972|ref|ZP_03012757.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
           17393]
 gi|189438545|gb|EDV07530.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
           17393]
          Length = 439

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   + S + + +      G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGTVASMVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +     ++ +    + +QS  +  L
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGSDDVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++     + +   + + P   +  D+I     +T   +E   +   S  V  L 
Sbjct: 273 KLMRRRYDTELFASKVQRVKEMMPDAFIGVDVIVGTRGETDEYFEQAYEFIKSLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|187779606|ref|ZP_02996079.1| hypothetical protein CLOSPO_03202 [Clostridium sporogenes ATCC
           15579]
 gi|187773231|gb|EDU37033.1| hypothetical protein CLOSPO_03202 [Clostridium sporogenes ATCC
           15579]
          Length = 450

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P  +  +  +   K      +I L VQS     L+ + R+++  + +  +   + +
Sbjct: 247 MTSHPKDLTDDVIEAIAKCDKLCEQIHLPVQSGSSDMLKKMNRHYDREKYLDVVSKIKKL 306

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            P +  S D+I   P +T   +E  L    +   D    +  +I KGT   K
Sbjct: 307 IPNVALSTDIIVGFPGETEKDFEETLSLVKTVEYDSAFTFLYSIRKGTPAAK 358


>gi|126735009|ref|ZP_01750755.1| tRNA-i(6)A37 modification enzyme MiaB [Roseobacter sp. CCS2]
 gi|126715564|gb|EBA12429.1| tRNA-i(6)A37 modification enzyme MiaB [Roseobacter sp. CCS2]
          Length = 435

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 81/244 (33%), Gaps = 20/244 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  + E Q + + +G + I+    ++    G    
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRIIREAQELVE-SGVKEITLLGQNVNAYHG---- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +A ++  + K   +      T  ++P+ ++    + + +    +  + L VQS  
Sbjct: 211 -HAGGLAGLIWALDKVDGLERIRFTT--SHPNDMDDALIEAHGRCDKLMPYLHLPVQSGS 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R H     +  I   R   P   +S D I   P +T   +E  +Q       
Sbjct: 268 DRILKAMNRKHTGESYVRLIARIRQARPDLLLSGDFIVGFPGETDQDFEDTMQLVRDVHY 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN-HSF 258
                ++ +   GT   +  +  + V+      +      Q   +   +   E+      
Sbjct: 328 GQAYSFKYSTRPGTPAAEKPQLPEDVMNDRLQRLQALLREQQQATQAAMVGREVKVLFEK 387

Query: 259 LGAE 262
            G E
Sbjct: 388 AGRE 391


>gi|159045769|ref|YP_001534563.1| MiaB-like tRNA modifying enzyme [Dinoroseobacter shibae DFL 12]
 gi|157913529|gb|ABV94962.1| MiaB-like tRNA modifying enzyme [Dinoroseobacter shibae DFL 12]
          Length = 416

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 29/207 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G    + + +  +  +++L   R  + +   G   +     
Sbjct: 146 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVDQIKRLV-DRGFNEVVLTGVDLTSWGAD 198

Query: 88  N---------IALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRIS 134
                     +  IL  +     +  +   +IEA+ + +                +  + 
Sbjct: 199 LPGTPRLGDLVMRILRLVPDLPRLRISSIDSIEADENLMRAIATEPRL-------MPHLH 251

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +Q+ ++  L+ + R H   +AIA    AR + P M+F  D+I   P +T   +E  L+
Sbjct: 252 LSLQAGDDLILKRMKRRHLRDDAIAFCEEARRLRPEMTFGADIIAGFPTETEAMFENSLR 311

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 +  L ++  +  KGT   +M 
Sbjct: 312 LVTDCDLTWLHVFPYSPRKGTPAARMP 338


>gi|116622276|ref|YP_824432.1| MiaB-like tRNA modifying enzyme [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225438|gb|ABJ84147.1| MiaB-like tRNA modifying enzyme [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 444

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 58/191 (30%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       R +      +   +  +           I+   +G    S +   
Sbjct: 157 CNNRCSFCIIPFVRGRSRSAPAAQVVEQVRALAARYHEVVLSGINLGRWGREPGSSMRLA 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +L        +           P     +       +    N +   +QS  ++ L
Sbjct: 217 GLLRLLLAETDVARLR-----LSSVEPMDFSEDLLHLMAASPRIANHVHAPLQSGSDRVL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R +        +  AR + P   +  D++   P +T  ++E   +        +L 
Sbjct: 272 RRMHRKYRPRHYADRVLKARALMPDGAIGADVMVGFPGETDAEFEESRRFIEQLPFTYLH 331

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 332 VFTYSERPGTP 342


>gi|326403547|ref|YP_004283629.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
           [Acidiphilium multivorum AIU301]
 gi|325050409|dbj|BAJ80747.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
           [Acidiphilium multivorum AIU301]
          Length = 450

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                  + L E + +    G R I+ +      + G  P 
Sbjct: 162 CDKFCTFC---VVPYTRGAEASRPAAAILAEARRLVA-GGAREIALLGQNVNAWHGEAP- 216

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   +A+   +     +     +P  ++      +R     +  + L VQS
Sbjct: 217 ---DGATWNLARLLAELADIDGLARLRYTTSHPRDMDAALIAAHRDNPKLMPFLHLPVQS 273

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             +  L  + R H A          R   P +  S D I   P +T   +   ++     
Sbjct: 274 GSDAILARMNRRHGADLFRRIAGELRAARPDIALSSDFIVGFPGETDADFAATMRLVRET 333

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 334 GFALAYSFKYSRRPGTP 350


>gi|323525903|ref|YP_004228056.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. CCGE1001]
 gi|323382905|gb|ADX54996.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. CCGE1001]
          Length = 473

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHR-YRTRSVENVLEEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 262

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 263 VEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 313

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  ++ A       + + 
Sbjct: 314 LNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETQETIQKTIEYAKEINPHTIQVS 373

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y  
Sbjct: 374 LAAPYPGTRLYDQ 386


>gi|153810776|ref|ZP_01963444.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174]
 gi|149833172|gb|EDM88254.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174]
          Length = 445

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC        F S      + Q  ++ S  + E+  + Q T   ++      G 
Sbjct: 154 CDKHCTYCIIPSLRGKFRSVPEERLLKQAEYMASQGVRELILVAQET---TVYGTDLYG- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  + + ++L  + +   +       +   P  +     Q  ++     + + L +
Sbjct: 210 ------KKTLHILLKKLCQIKGIRWIR--VLYCYPEEIYDELIQVMKEEKKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR  + ++ +  I   R   P +     LI   P +T    +  ++   
Sbjct: 262 QHASDRILKRMGRRTSKAQLVGIITKLRREIPDIVLRTSLITGFPGETEEDHQELMEFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D L ++  + E+GT    M +     L  E    ++  L Q I
Sbjct: 322 EMEFDRLGVFTYSPEEGTPAETMEEQVPEEL-KEERRDEIMELQQEI 367


>gi|330997206|ref|ZP_08321059.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paraprevotella
           xylaniphila YIT 11841]
 gi|329571001|gb|EGG52708.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paraprevotella
           xylaniphila YIT 11841]
          Length = 441

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 80/236 (33%), Gaps = 21/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C YC            +   ++S L E++ +++       L G    S +  GG  
Sbjct: 155 CNNFCHYC---IVPYTRGRERSRDVESILNEVRDLKKRGYKEVTLLGQNVNSYLHVGGDG 211

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            ++     +  ++   A    V         ++P  +  +  +   +       I L VQ
Sbjct: 212 KTV-SFPQLLRLVAHEADGMRVR-----FTTSHPKDMSDDTLRVIAEEPNVCRHIHLPVQ 265

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R +     +  +   R I P   +S D+      +T    +M L     
Sbjct: 266 SGSDRILKLMNRKYTREWYLDRVAAIRRIVPDCGLSTDIFSGYCSETEEDHQMSLSLMRE 325

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A D   +++ +   GT     H   D+    +   ++     Q+  SA      E
Sbjct: 326 CAYDSAFMFKYSERPGTY-ASKHLPDDVPEDVKVRRLNELIALQNELSAESNRHCE 380


>gi|323702404|ref|ZP_08114069.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532710|gb|EGB22584.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
           DSM 574]
          Length = 441

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 18/237 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFG--GGTPSL 83
           C   C YC     +   +    + +         + ++Q      ++ I  G  G   + 
Sbjct: 154 CNSFCAYC----IIPYARGPVRSRLPENVLKAATELVQQGYQEIVLTGIHIGAYGQDFTA 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +A +++ +A    +      ++E  P  +     +           + + +QS +
Sbjct: 210 QNID-LAWLVERLAAVPGLRRLRLGSVE--PHDINTALIEAVANHPNICRHLHIPLQSGD 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +Q L  + R ++  E    I       P ++   D+I   P +T   ++  L+       
Sbjct: 267 DQILAKMRRRYDTREYNRLIAEIYRKVPGVAITSDVIVGFPGETEANFQNTLRTVAKAKF 326

Query: 200 DHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             + +++ +  KGT    F       +    S  +      L             E+
Sbjct: 327 ARIHVFKYSPRKGTPAAEFADQVPPEEKEERSRRLIELGEQLAHEFARIQVGKDLEV 383


>gi|241761438|ref|ZP_04759526.1| RNA modification enzyme, MiaB family [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241374345|gb|EER63842.1| RNA modification enzyme, MiaB family [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 428

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 20/217 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V  Y  G E  +    + +         +    I   G   +    +
Sbjct: 139 CDKFCTYC-----VVPYTRGAE--VSRPWSRIVKEAHALVDKGAREITLLGQNVNAWTGE 191

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +       +  ++  +AK   +      T  ++P+ +     + + +    +  + L VQ
Sbjct: 192 DEAGRSQGLDGLIRALAKIDGLERIRYTT--SHPNDMTEGLIEAHGEIDKLMPFLHLPVQ 249

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R H A   +  ++  + + P ++   D I   P ++   ++  L     
Sbjct: 250 SGSNRILKAMNRAHTAESYLTLMNRLKEVRPDIALSGDFIVGFPGESEEDFQATLDLISE 309

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                   +  +   GT    M    D  +  E +  
Sbjct: 310 VGYSLAFSFAYSPRPGTPAADMDNQIDPEISRERLQR 346


>gi|224026389|ref|ZP_03644755.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM
           18228]
 gi|224019625|gb|EEF77623.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM
           18228]
          Length = 438

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I+  + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGKIEDLVAQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ--GYRKAGVNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   + +A +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDQVEGIERFRISSIE--PNLLTDEIIEYVAHSRAFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + I   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDIALFASKIRKIKELMPDAFIGVDVIVGTRGETPEYFEKAYEFIRGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|167745376|ref|ZP_02417503.1| hypothetical protein ANACAC_00067 [Anaerostipes caccae DSM 14662]
 gi|167655097|gb|EDR99226.1| hypothetical protein ANACAC_00067 [Anaerostipes caccae DSM 14662]
          Length = 349

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 66/193 (34%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +V RY++ +E  + +  +  +      G RS   +  GG  P  
Sbjct: 63  YCKNDCLYCGIRRSNPNVSRYRLTEEQILSACESGYEL-----GYRSF--VLQGGEDP-Y 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  + K++      +  I  +       ++Q   +AG NR  L  ++  E+
Sbjct: 115 FHDERMVSIVSAMRKSYP-----DCAITLSLGERSPESYQALFEAGANRYLLRHETATEE 169

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + L     + +     +   +     +    +   P QT      +L          +
Sbjct: 170 HYQKLHPEAMSLARRKQCLWDLKKAGFHVGTGFMVGAPGQTAAHLAEDLLFIKELNPKMV 229

Query: 203 SLYQLTIEKGTLF 215
            +        T F
Sbjct: 230 GIGPFIPHHDTPF 242


>gi|56550973|ref|YP_161812.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|260753353|ref|YP_003226246.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|81355650|sp|Q5NRF3|MIAB_ZYMMO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|56542547|gb|AAV88701.1| RNA modification enzyme, MiaB family [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258552716|gb|ACV75662.1| RNA modification enzyme, MiaB family [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 445

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 20/217 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V  Y  G E  +    + +         +    I   G   +    +
Sbjct: 156 CDKFCTYC-----VVPYTRGAE--VSRPWSRIVKEAHALVDKGAREITLLGQNVNAWTGE 208

Query: 88  N-------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +       +  ++  +AK   +      T  ++P+ +     + + +    +  + L VQ
Sbjct: 209 DEAGRSQGLDGLIRALAKIDGLERIRYTT--SHPNDMTEGLIEAHGEIDKLMPFLHLPVQ 266

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R H A   +  ++  + + P ++   D I   P ++   ++  L     
Sbjct: 267 SGSNRILKAMNRAHTAESYLTLMNRLKEVRPDIALSGDFIVGFPGESEEDFQATLDLISE 326

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                   +  +   GT    M    D  +  E +  
Sbjct: 327 VGYSLAFSFAYSPRPGTPAADMDNQIDPEISRERLQR 363


>gi|148260356|ref|YP_001234483.1| RNA modification protein [Acidiphilium cryptum JF-5]
 gi|229890413|sp|A5FY82|MIAB_ACICJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146402037|gb|ABQ30564.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidiphilium cryptum
           JF-5]
          Length = 450

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 18/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C +C                  + L E + +    G R I+ +      + G  P 
Sbjct: 162 CDKFCTFC---VVPYTRGAEASRPAAAILAEARRLVA-GGAREIALLGQNVNAWHGEAP- 216

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                    +   +A+   +     +     +P  ++      +R     +  + L VQS
Sbjct: 217 ---DGATWNLARLLAELADIDGLARLRYTTSHPRDMDAALIAAHRDNPKLMPFLHLPVQS 273

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
             +  L  + R H A          R   P +  S D I   P +T   +   ++     
Sbjct: 274 GSDAILARMNRRHGADLFRRIAGELRAARPDIALSSDFIVGFPGETDADFAATMRLVRET 333

Query: 198 AVDHLSLYQLTIEKGTL 214
                  ++ +   GT 
Sbjct: 334 GFALAYSFKYSRRPGTP 350


>gi|304316819|ref|YP_003851964.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778321|gb|ADL68880.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 471

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 12/211 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    +VR  +  +E         +  ++ L           G    S     
Sbjct: 188 CNNFCTYC-IVPYVRGREKSREP-----HDILNEIKSLANEGFKEITLLGQNVNSYGNDL 241

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            I +    +         +E    + ++P  +        R        + L VQS   +
Sbjct: 242 PIKIDFADLLYMINDIDGIERIRFMTSHPKDISDKLIFAMRDLDKLCEHLHLPVQSGSNK 301

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R ++    +  I+  R+  P ++   D+I   P +T   ++  L        D 
Sbjct: 302 ILERMNRKYSRERYLEIINKLRDNIPGIAITTDIIVGFPGETDKDFQDTLDLVKEVRYDS 361

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
              +  +  KGT   KM    D  +  + + 
Sbjct: 362 AYTFIYSKRKGTPAEKMSNQVDEDIKHKRLE 392


>gi|163851836|ref|YP_001639879.1| radical SAM domain-containing protein [Methylobacterium extorquens
           PA1]
 gi|163663441|gb|ABY30808.1| Radical SAM domain protein [Methylobacterium extorquens PA1]
          Length = 437

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 11/195 (5%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F          +   +     E + +    G    +++    G    +     A
Sbjct: 203 CPFTCSFCEWGTMESPKRVRAVDHLTQEFEAIA---GHDVYAALLVDAG----LNLNRNA 255

Query: 91  LI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            + L   A+         +  E  P++V   +           + +G+QS +   L  + 
Sbjct: 256 FLNLRRAAEESGFFERHGLICEVYPAAVRQEHLDFLATVSNAYVGIGLQSFDNAVLAHVD 315

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           R ++            +    ++ ++I  LP      +    +RA       L +Y   +
Sbjct: 316 RTYDERRFDETFAKL-DAVASLAVEIILGLPGDNPETFRRNFERARRL-PCALRVYHCVV 373

Query: 210 EKGTLFYKMHKDGDL 224
               L  +   +  L
Sbjct: 374 LPSGLMVRSPPEHRL 388


>gi|303241534|ref|ZP_07328035.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
           CD2]
 gi|302590952|gb|EFL60699.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
           CD2]
          Length = 477

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 82/269 (30%), Gaps = 26/269 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +  +I++ + E++ + RQ     ++           L   
Sbjct: 196 CNNFCSYC---IVPYVRGRERSRYIENIVDEVRMLGRQGLKEITLLGQNVNSYGKDLGND 252

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
              A +L  + +   +       + ++P  +        R        + L  QS   + 
Sbjct: 253 TTFAKLLGELNEVEGIERIRF--MTSHPKDLSDELIFAMRDLNKVCEHLHLPFQSGSTRI 310

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++  + +  +   +   P +S   D+I   P +T   ++  L        D  
Sbjct: 311 LKEMNRKYSKEDYLNLLEKVKINIPGISLTSDIIVGFPGETEEDFQDTLDVVEKGRFDQ- 369

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY---EI------ 253
            +Y     K T          +    +          Q+  S    H Y   EI      
Sbjct: 370 -IYSFLYSKRTGTPAAKSVDQVPEEVKKERFQRLMEVQNRISNEINHEYLDKEIEVLVEG 428

Query: 254 ---SNHSFLGAESLHN--LNYWRYGDYIG 277
              +N       +  N  +N+    + IG
Sbjct: 429 ESKTNDKIYTGRTRENKIVNFDGNSEMIG 457


>gi|103487545|ref|YP_617106.1| tRNA-i(6)A37 modification enzyme MiaB [Sphingopyxis alaskensis
           RB2256]
 gi|123379656|sp|Q1GRE9|MIAB_SPHAL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|98977622|gb|ABF53773.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sphingopyxis alaskensis
           RB2256]
          Length = 444

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 67/214 (31%), Gaps = 14/214 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V  Y  G E   + F   +   R L           G    + I   
Sbjct: 158 CDKFCTYC-----VVPYTRGAEIS-RPFADLIAEARALVAGGVREITLLGQNVNAWIGED 211

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +        ++    +       ++P+ +       + +    +  + L VQ+  
Sbjct: 212 AKGRAIGLDGLIRELAKEDGLERIRYTTSHPNDMTDGLIVAHGEVDKLMPFLHLPVQAGS 271

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R+H+    +  I   R   P ++   D I   P ++   +   L    +   
Sbjct: 272 DRILAAMNRSHSVESYLKVIERVREARPDIAISGDFIVGFPGESEADFAATLDIVRATRY 331

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                ++ +   GT    M    D  + +E +  
Sbjct: 332 AMAYSFKYSRRPGTPAATMDDQIDEAVMNERLQR 365


>gi|169349836|ref|ZP_02866774.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552]
 gi|169293404|gb|EDS75537.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552]
          Length = 428

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 70/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +     S L + + +        + +     G    ++  
Sbjct: 152 CNNFCTYC---IIPYARGRVRSRDKDSVLNQAKTLVANGYVEIVLTGIHTAGYGEDLDNY 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           +   +L  + K   +      +IE +   +              V+ + + +QS  + +L
Sbjct: 209 SFYDLLVDLVKIDGLKRLRISSIETS--QISDEIINLIGSNDIIVDHLHIPLQSGCDATL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  S+ +  I+  RN  P ++F  D+I   P ++  ++E             L 
Sbjct: 267 KRMNRKYTTSQYLEKINKIRNYLPNIAFTTDVIVGFPGESDEEFEETYNFIKEVNYSELH 326

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  ++ + T   KM    D
Sbjct: 327 VFPYSLRRNTPAAKMKDQVD 346


>gi|146295611|ref|YP_001179382.1| cobalamin B12-binding domain-containing protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409187|gb|ABP66191.1| cobalamin B12-binding domain protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 483

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   S        + +  +   + + +  +L   +    +     T +     
Sbjct: 206 CPGECIFCA--SRALSGPKYRCHSAEWLASLIYYYYKLLSFKMFGPLD---DTFT----A 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +   ++    +  N+  + ++    ++    +   K+    + +GV+S +++ L+ 
Sbjct: 257 NRIRLKKFLSYLKILEINIPWSCKSRVDVIDGELVEILYKSKCISVHIGVESGDDEVLKS 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     + + AI L  +   R     I   P  T+   E  L  A       +++  +
Sbjct: 317 IEKRITVEKVLKAITLLASKGIRAECSFIIGHPSDTLESIERTLILADKLDKCGVAISVM 376

Query: 208 TI---EKGTLFYKMHKDGDLV 225
            I     GT  +   K  +L 
Sbjct: 377 GICTPFPGTKIWNRLKLYELQ 397


>gi|330836973|ref|YP_004411614.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374]
 gi|329748876|gb|AEC02232.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374]
          Length = 453

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 75/228 (32%), Gaps = 14/228 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C   C +C    HV R K    N  +     M   RQ         +   G   ++    
Sbjct: 174 CDNACAFC--RVHVARGKAVDLNADEVVRRVMHLERQ-----GFHEVVLTGVNLTMYGYK 226

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQS 144
            + +  +++ I ++      + ++    P  V+           +     + VQS  ++ 
Sbjct: 227 GEGLGALVEKILEHIGSDMRIRLS-SLEPDHVDGRLLDTLHDPRMQPYFHIPVQSANQKV 285

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R+++       I   R+I     ++ D+I  LP +   +++       +     L
Sbjct: 286 LYRINRHYSVEHLAWVIDRLRDIKDDPCIAADIIAGLPAEYDAEFQETYDFLKNKGFARL 345

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            ++  +    T  Y+        +  +  A  L  L+  +   +    
Sbjct: 346 HVFPFSPRPDTPLYQARDRVPESV-RDERAARLRELSACLLKEYSARQ 392


>gi|257465987|ref|ZP_05630298.1| biotin synthase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917143|ref|ZP_07913383.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313691018|gb|EFS27853.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 348

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 69/194 (35%), Gaps = 16/194 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C ++C YC    +N+ V RY++ +E  +++     Q  ++L       +    GG    
Sbjct: 63  YCKRECRYCGINRYNTQVERYRLSEEEILKAC----QRAKELG----FHTFVLQGGEDVY 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  ++  I + +      E  +  +       ++Q  ++ GV+R  L  +++  +
Sbjct: 115 FRDEILVDLVKKIKERFP-----EFALTLSVGERPYESYQKLKEVGVDRFLLRHETIIPE 169

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L         +  +   +++  ++    +  LP      +  +L      +     
Sbjct: 170 MYKKLHPQSELQTRLDCLESLKSLGYQIGAGFMVGLPGYENKDYVKDLLFLKHLSPHMTG 229

Query: 204 LYQLTIEKGTLFYK 217
           +        T    
Sbjct: 230 IGPFIPHHDTELRN 243


>gi|162453798|ref|YP_001616165.1| hypothetical protein sce5522 [Sorangium cellulosum 'So ce 56']
 gi|161164380|emb|CAN95685.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 476

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 18/207 (8%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLI----E 85
           CP+ C F +        +   +   + ++            ++  +      +L+     
Sbjct: 165 CPFTCSFCTVPDLNPGFRVRPVDEVIRDIATTHFPRFWQEKVAWFWDD----NLLVQRRW 220

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +   L G+ + W   ++++I         +        ++G   I LG++SL+E  L
Sbjct: 221 AKELLRELAGLDRWWLTQASIDIVK-------DRELLDAMERSGCIGIFLGIESLDEADL 273

Query: 146 RFLGRNHNAS-EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + +  N + E   AI    +    +    I     QT         R     VD   L
Sbjct: 274 KSVDKRQNRAREYREAIRKLHDRGICVMAGFISGFDDQTPEVIASTADRLNEIGVDVPFL 333

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
             LT  +GT  Y  H+    +L   + 
Sbjct: 334 SILTPFRGTPLYDEHRRDGRILEERDW 360


>gi|110681057|ref|YP_684064.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           denitrificans OCh 114]
 gi|123361551|sp|Q161G5|MIAB_ROSDO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|109457173|gb|ABG33378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           denitrificans OCh 114]
          Length = 441

 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 72/200 (36%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              +   L E + + +  G R I+    ++    G  + 
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPVTRVLDEARDLVER-GVREITLLGQNVNAYHGAGAD 214

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + +A ++        +     I     +P+ ++ +  + +R     +  + L VQS 
Sbjct: 215 GNEKTLAQLI---WALNDIDGLERIRFTTSHPNDMQDDLIEAHRDCPKLMPYLHLPVQSG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R H A   +  I   R   P +  S D I   P++T   ++  L    +  
Sbjct: 272 SDRILKRMNRKHTADSYLRLIERIRVGRPDILLSGDFIVGFPEETEADFQATLDLIEAVN 331

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
             +   ++ +   GT   + 
Sbjct: 332 YGYAYSFKYSTRPGTPAAER 351


>gi|307267355|ref|ZP_07548850.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917613|gb|EFN47892.1| Radical SAM domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 349

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N  ++RY++  E  +Q          +      + +I    G    
Sbjct: 64  YCSNTCFYCGLRGPNRTIKRYRMEPEEILQCV--------KYGASVGLKTIVLQSGEDKY 115

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            +   +  I++ I K        +I +  +   +   ++   +KAG +R  L +++  ++
Sbjct: 116 FKITTLCKIIEEIKKL-------DIAVTLSIGELSTKDYAELKKAGADRYLLRIETTNKE 168

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L    +    +  +   R +   +    +  LP QT+     +L        D L 
Sbjct: 169 LYQKLHPGMSYENRVRCLMDLRELDYEVGTGSLIGLPGQTLEMLAQDLIFFKKIDADMLG 228

Query: 204 LYQLTIEKGTLFYK 217
           +      + T   +
Sbjct: 229 IGPFIPCENTPLER 242


>gi|325831353|ref|ZP_08164607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eggerthella sp. HGA1]
 gi|325486607|gb|EGC89055.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eggerthella sp. HGA1]
          Length = 459

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 29/205 (14%)

Query: 28  CVKKCPYCDFNSHVRRYK---------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC    +VR  +            E ++ + + E+  + Q              
Sbjct: 165 CNNFCSYC-IVPYVRGREKSRPLEDIVAEAERYVAAGVKEITLLGQNVNSYGRDL----Y 219

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISL 135
           G+P     Q +  +     +    ++       ++P  +       F   R   +  + L
Sbjct: 220 GSPRF--AQVLDALDQTGIERLRFAT-------SHPKDLNDEVVGRFATLRSL-MPALHL 269

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            VQS  +  L  + R +      A +   R+  P +  S D+I   P +T   +E   + 
Sbjct: 270 PVQSGSDAVLAAMNRRYTRDHYRALVAKLRDDVPDIALSTDIIVGFPGETAKDFEDTYRL 329

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                   +  +  +  +GT    M
Sbjct: 330 VDEVGYHQVFTFIYSKREGTPAASM 354


>gi|315606981|ref|ZP_07881987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae ATCC
           33574]
 gi|315251362|gb|EFU31345.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae ATCC
           33574]
          Length = 444

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 11/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C   C YC            +   ++S L E+  +R            ++   G  P+  
Sbjct: 156 CNNFCHYC---IVPFTRGRERSRDVESILKEVCDLRDRGFKEVTLLGQNVNSYGLLPNGK 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            P +       + K     S + +     NP  +  +  Q         N I    QS  
Sbjct: 213 RPADGTSFAQLLRKVAETVSEMRVRFTTSNPEDMTDDIVQAVADMPNLCNHIHFPAQSGS 272

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R +   + +  +   + + P      D+      ++   ++  L        
Sbjct: 273 DKVLRLMNRKYTRQQYLDKVATIKRLIPDCGITTDIFVGYHDESEEDYQQTLSLVREVGY 332

Query: 200 DHLSLYQLTIEKGTL 214
           D   +++ +   GT 
Sbjct: 333 DSAFMFKYSERPGTY 347


>gi|257452218|ref|ZP_05617517.1| biotin synthase [Fusobacterium sp. 3_1_5R]
 gi|317058761|ref|ZP_07923246.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
 gi|313684437|gb|EFS21272.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
          Length = 348

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 69/194 (35%), Gaps = 16/194 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C ++C YC    +N+ V RY++ +E  +++     Q  ++L       +    GG    
Sbjct: 63  YCKRECRYCGINRYNTQVERYRLSEEEILKAC----QRAKELG----FHTFVLQGGEDVY 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  ++  I + +      E  +  +       ++Q  ++ GV+R  L  +++  +
Sbjct: 115 FRDEILVDLVKKIKERFP-----EFALTLSVGERPYESYQKLKEVGVDRFLLRHETIIPE 169

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L         +  +   +++  ++    +  LP      +  +L      +     
Sbjct: 170 MYKKLHPQSELQTRLDCLESLKSLGYQIGAGFMVGLPGYENKDYVKDLLFLKHLSPHMTG 229

Query: 204 LYQLTIEKGTLFYK 217
           +        T    
Sbjct: 230 IGPFIPHHDTELRN 243


>gi|229890698|sp|A9HZZ2|MIAB_BORPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 480

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 62/192 (32%), Gaps = 11/192 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    +       Q     ++   +   + G      E 
Sbjct: 186 CSKYCSFCVVPYTRGEEVSRPFDDVLVEVADLADQGVKEVTLLGQNVNAYRGPMGDTGEI 245

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A +L+ + +   +      T  ++P  +       Y      V+ + L VQ+  ++ 
Sbjct: 246 ADFATLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYANLPKLVSFLHLPVQAGSDRV 303

Query: 145 LRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E  + +    A      +S D I   P +T   ++  ++       D  
Sbjct: 304 LAAMKRGYTTLEFKSVVRRLRAARPGLTLSSDFIVGFPGETEEDFDKTMKLIEDVGFDTS 363

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 364 FSFIYSRRPGTP 375


>gi|163857967|ref|YP_001632265.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
           petrii DSM 12804]
 gi|163261695|emb|CAP43997.1| conserved hypothetical protein [Bordetella petrii]
          Length = 514

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 62/192 (32%), Gaps = 11/192 (5%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEP 86
           C  YC F      R +     F    +       Q     ++   +   + G      E 
Sbjct: 220 CSKYCSFCVVPYTRGEEVSRPFDDVLVEVADLADQGVKEVTLLGQNVNAYRGPMGDTGEI 279

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            + A +L+ + +   +      T  ++P  +       Y      V+ + L VQ+  ++ 
Sbjct: 280 ADFATLLEYVHEIPGIERIRYTT--SHPKEMTQRMVDAYANLPKLVSFLHLPVQAGSDRV 337

Query: 145 LRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E  + +    A      +S D I   P +T   ++  ++       D  
Sbjct: 338 LAAMKRGYTTLEFKSVVRRLRAARPGLTLSSDFIVGFPGETEEDFDKTMKLIEDVGFDTS 397

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 398 FSFIYSRRPGTP 409


>gi|110597823|ref|ZP_01386106.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
 gi|110340548|gb|EAT59031.1| Radical SAM [Chlorobium ferrooxidans DSM 13031]
          Length = 500

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C  KC +C  N         +       +TE+  +R+L    SI  +   F     + ++
Sbjct: 175 CPYKCDFC--NVTALLGHKIRTKTSDQIITELDALRRLGWQDSIFFVDDNFIAHK-TYLK 231

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEV-NNFQGYRKAGVNRISLGVQSLEEQS 144
            + +  ++         S  +    E + +  +         +AG   + +G+++ ++ +
Sbjct: 232 KELLPRLIAWQKGY---SRTIRFYTECSINLADDQELMSLMVEAGFGMVFIGIETPDDAA 288

Query: 145 LRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   G+ H  + + ++ I   +     +    I      T + ++ +++      +    
Sbjct: 289 LHACGKQHNTSRDMLSNIRKIQQSGMEVQGGFIVGFDSDTPSIFQKQIEFIQKSGIVTAM 348

Query: 204 LYQLTIEKGTLFYKMHK 220
           +  L    GT  Y   +
Sbjct: 349 VGILQALPGTRLYDRMQ 365


>gi|78212394|ref|YP_381173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. CC9605]
 gi|123743350|sp|Q3ALB4|MIAB_SYNSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78196853|gb|ABB34618.1| Protein of unknown function UPF0004 [Synechococcus sp. CC9605]
          Length = 464

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 67/236 (28%), Gaps = 17/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC            Q    Q+   EM+ +    G + I+ +      +G   P 
Sbjct: 169 CNERCTYC---VVPSVRGKEQSRLPQAIKLEMEGLAAQ-GYKEITLLGQNIDAYGRDLPG 224

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +    + D +     V     I     +P                      +  Q
Sbjct: 225 ITPEGRRQHTLTDLLHHVHDVEGIERIRFATSHPRYFTERLIDACADLPKLCEHFHIPFQ 284

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +        I   R   P   +S D+I A P +T  Q+   L     
Sbjct: 285 SGDNDVLQAMARGYTVERYRRIIDRIRERMPDASLSADVIVAFPGETDAQYRRTLDLIEE 344

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              D ++    +    T       D  L    +   +   N      +      YE
Sbjct: 345 IGFDQVNTAAYSPRPNTPAAN--WDNQLPEEVKVERLREINALVERCARKANARYE 398


>gi|300856976|ref|YP_003781960.1| putative biotin synthase [Clostridium ljungdahlii DSM 13528]
 gi|300437091|gb|ADK16858.1| putative biotin synthase [Clostridium ljungdahlii DSM 13528]
          Length = 345

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 59/189 (31%), Gaps = 12/189 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR     + +       ++  ++  G     ++    G        
Sbjct: 64  CKRNCMYCG----LRRDNKNIKRYRIEPDKIIELAKKAVG-YGYKTVVLQSGEDDYYTVD 118

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  + K       ++I +  +        ++ +++AG +R  + +++ + +    
Sbjct: 119 KLKYIISNMKK-------MDIAVTLSIGEKTFEEYKAFKEAGADRYLIRIETTDPELYAK 171

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +    +       +     +   +    +  LP QT      ++        D + +   
Sbjct: 172 MDPGMSYENRKRCLKDLGKLGYEVGTGCLIGLPGQTFESLAEDILFFKEIDADMVGVGPF 231

Query: 208 TIEKGTLFY 216
                T   
Sbjct: 232 IPNADTPLR 240


>gi|297559650|ref|YP_003678624.1| RNA modification enzyme, MiaB family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844098|gb|ADH66118.1| RNA modification enzyme, MiaB family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 496

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 56/195 (28%), Gaps = 8/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R K                + +     ++             + Q
Sbjct: 158 CNNTCTFC--IVPALRGKEQDRRPGDVLAEVRALVDEGVSEITLLGQNVNAYGSGFGDRQ 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
             + +L    +   +          +P     +  +   +    + ++ + +QS   + L
Sbjct: 216 AFSKLLRACGEIEGLERVRF--TSPHPRDFTDDVIEAMAETPNVMPQLHMPLQSGSSRVL 273

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++     +  +    A      ++ D+I   P +T   ++  L            
Sbjct: 274 KAMRRSYRQERFLGIVEKVRAAMPHAAITTDIIVGFPGETEEDFQETLHVVREARFSMAF 333

Query: 204 LYQLTIEKGTLFYKM 218
            +Q +   GT    M
Sbjct: 334 TFQYSKRPGTPAATM 348


>gi|258593728|emb|CBE70069.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 779

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 84/257 (32%), Gaps = 23/257 (8%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IEPQN 88
           CP+ C F + +           +S     + +R+      I   FF     +      + 
Sbjct: 245 CPFSCSFCTIINVQGRMMRE--RSPEVIAELVRRNYTEHQIDFYFFTDDNFARKKWWRET 302

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
              I+    +   +S  +++ +   P        +   +AG  ++ +G++S+   +++  
Sbjct: 303 FEAIIRLREEGIKISFMMQVDLARKPQDF----VRLAAEAGCTQVFVGMESVNPDNIKAQ 358

Query: 149 GRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
           G+  N   E  A I    +    +    I  +P  T  Q  +++Q  +     D  S + 
Sbjct: 359 GKGQNKVEEYRAIIGEWHDAGVAVHVAYIIGMPFDTKAQVALDMQYLIDEIQPDQASFFM 418

Query: 207 LTIEKGTL----FYKMHKDGDLVLPSEN-------VAVDLYNLTQSITSAHGLHAYEISN 255
           LT   G+       +  +  D  L   +            +    +         Y   N
Sbjct: 419 LTPLPGSQDHKEMQQQGEWMDPDLNKRDSFHATTAHPNMTFEEWTAAYQEAWRAFYSKEN 478

Query: 256 HSFLGAESLHN-LNYWR 271
            + + A   HN   YW 
Sbjct: 479 MAKILARWQHNPRTYWN 495


>gi|222099771|ref|YP_002534339.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga neapolitana DSM
           4359]
 gi|221572161|gb|ACM22973.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga neapolitana DSM
           4359]
          Length = 430

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 22/197 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C +KC +C   S     K    E+ +      +   ++     +  +  +G         
Sbjct: 148 CDRKCTFCSIPSFKGNLKSRSVEDIVHEVEDLLAEGKKEIILVAQDTTSYG--------- 198

Query: 87  QNIA---LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +++     + D + +  ++  +  I +   +P  +         K    VN   + VQ  
Sbjct: 199 EDLYGKQALSDLLRRLNSLKGDFWIRVMYLHPDHLTDEIIDTILKLEKVVNYFDVPVQHG 258

Query: 141 EEQSLRFLGRNHNASEAIAAI----HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
            ++ L  +GR  ++ E    +      A +   R S   I   P +T   +E   +    
Sbjct: 259 SDRILTLMGRIRSSKELKNMLLRIRDKAPDAVLRTSV--IVGFPGETEEDFEELKRFVEE 316

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L ++  + E+GT
Sbjct: 317 VKFDKLGVFVYSDEEGT 333


>gi|145590038|ref|YP_001156635.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|229890594|sp|A4T007|MIAB_POLSQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145048444|gb|ABP35071.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 448

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 67/211 (31%), Gaps = 20/211 (9%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C YC       R +     F          +  L        +  G 
Sbjct: 147 SAYVSIMEGCSKYCSYC--VVPYTRGEEVSRPFDDVLTE----VAGLASKGVKEIVLLGQ 200

Query: 79  GTPSLI-------EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
              + +       E  + AL+++ IA+   V      T  ++P          Y K    
Sbjct: 201 NVNAYLGKMGDAEEIADFALLIEYIAEIPGVERIRFTT--SHPKEFTQRLIDVYAKVPKL 258

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQW 187
           V+ + L VQ   +  L  + R + A E  + I    A      +S D I   P +T   +
Sbjct: 259 VSHLHLPVQHGSDSILSAMKRGYTALEYKSIIRKMRAVRPDLTLSSDFIVGFPGETDADF 318

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           E  L+       D+   +  +   GT    +
Sbjct: 319 EKLLKMVQELDFDNSFCFIFSPRPGTPAANL 349


>gi|15674523|ref|NP_268697.1| hypothetical protein SPy_0376 [Streptococcus pyogenes M1 GAS]
 gi|21909810|ref|NP_664078.1| hypothetical protein SpyM3_0274 [Streptococcus pyogenes MGAS315]
 gi|28896497|ref|NP_802847.1| hypothetical protein SPs1585 [Streptococcus pyogenes SSI-1]
 gi|71910129|ref|YP_281679.1| Fe-S oxidoreductase [Streptococcus pyogenes MGAS5005]
 gi|13621626|gb|AAK33418.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|21903996|gb|AAM78881.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
 gi|28811751|dbj|BAC64680.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|71852911|gb|AAZ50934.1| Fe-S oxidoreductase [Streptococcus pyogenes MGAS5005]
          Length = 306

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 100 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKETVRRLRHY-PNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 219 LLHLMTNTRMQRDYHEGRLKL 239


>gi|86151990|ref|ZP_01070203.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85841098|gb|EAQ58347.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter
           jejuni subsp. jejuni 260.94]
          Length = 439

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L+ + R  N++     ++L ++     +    I   P ++   +E   +    +  D
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSTPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFD 317

Query: 201 HLSLYQLTIEKGTLFYKM 218
            +S++  + E+ T  + M
Sbjct: 318 RVSVFAYSKEEDTAAFDM 335


>gi|330504998|ref|YP_004381867.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           mendocina NK-01]
 gi|328919284|gb|AEB60115.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           mendocina NK-01]
          Length = 459

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 80/245 (32%), Gaps = 17/245 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C +C       R +      +   +       +     ++   +   + G  P   
Sbjct: 169 CSKYCTFC--VVPYTRGEEVSRPLVDVLMEITSLTEKGVKEVTLLGQNVNGYRGEAPDG- 225

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              + A +L  +A    V      T  ++P          + +    V  + L VQS  +
Sbjct: 226 HIADFAELLHAVAALDGVERIRYTT--SHPLEFSDAIIAAHAEIPQLVKYLHLPVQSGSD 283

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + RNH A E  + I   R   P +  S D I   P +T   +E  ++       D
Sbjct: 284 RILAAMKRNHTALEYKSRIRKLRAAVPDILISSDFIVGFPGETEKDFEQTMKLIEDVGFD 343

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL-----HAYEISN 255
               +  +   GT    +  D    +  + +A+  + + Q+                +S+
Sbjct: 344 FSFSFIYSSRPGTPAADLVDDTPEEVKKQRLALLQHRINQNGFENSRRMVGTVQRILVSD 403

Query: 256 HSFLG 260
           +S   
Sbjct: 404 YSKKD 408


>gi|303246017|ref|ZP_07332299.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302492800|gb|EFL52668.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 495

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           +L   A        +  T+  +   V+         AG   +  GV+S +   L+ +G+ 
Sbjct: 281 VLGICAAIKERGLKIPWTVMGDAMFVDRETLFAMADAGCIGMKFGVESADPGILKAIGKP 340

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
            +  +    +   R    R        LP +T    +  L        D   + +     
Sbjct: 341 LDLDKCRQVVKWCRECGIRTHATFCLGLPGETEETIKKSLAFMEELDADTAQVSKAVPYP 400

Query: 212 GTLFYKM 218
           GT  Y  
Sbjct: 401 GTPMYAW 407


>gi|296284753|ref|ZP_06862751.1| hypothetical protein CbatJ_14083 [Citromicrobium bathyomarinum
           JL354]
          Length = 391

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 68/204 (33%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR----QLTGPRSISSIFFGGGTPSL 83
           C   C +C   S        + + I + L  ++       Q      +    +G   P  
Sbjct: 122 CDHACTFC---SIPAGRGTSRSDEIATVLRAVEARLIEGTQEVVLTGVDLTSWGHDLPG- 177

Query: 84  IEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            EP     ++ IL+   +   +  +    IE     ++   F         +  + L +Q
Sbjct: 178 -EPRLGALVSAILNEFPQLPRLRLSSVDGIE-----IDDALFDLIAGEPRVMPHLHLSLQ 231

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ + R H   +A+  +   +   P ++   DLI   P +T       L     
Sbjct: 232 HGSDLILKRMKRRHLRGDAVDLVARLKARRPEIAIGADLIAGFPTETDAHHADNLSIIAE 291

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             + H  ++  +   GT   +M +
Sbjct: 292 CGIVHGHIFPYSPRAGTPAARMPQ 315


>gi|296188730|ref|ZP_06857117.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium
           carboxidivorans P7]
 gi|296046657|gb|EFG86104.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium
           carboxidivorans P7]
          Length = 386

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +  +P     +      +      ++ L VQS   + L+ + R++   + +  +   R  
Sbjct: 246 MTPHPKDFTQDVLDAIAECENVCEQVHLPVQSGSSRILKKMNRHYTKEQYLDLVRRIRET 305

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            P ++   D+I   P +T   +E  L  A     D    +  +  KGT 
Sbjct: 306 IPDVAITTDIIVGFPGETEEDFEETLSLAREVQYDSAFTFIYSRRKGTP 354


>gi|229490909|ref|ZP_04384744.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rhodococcus erythropolis
           SK121]
 gi|229322299|gb|EEN88085.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rhodococcus erythropolis
           SK121]
          Length = 521

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 71/226 (31%), Gaps = 15/226 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L A+ + +  +  ++   +V     C   C +C       R K                +
Sbjct: 154 LEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC--IVPALRGKEVDRRPGDILAEVQALV 211

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSS 116
            +     ++          S  +P+        A +L        +          +P+ 
Sbjct: 212 DEGVSEVTLLGQNVNAYGVSFADPEQPRDRGAFASLLKACGHIDGLERVRF--TSPHPAE 269

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMS 172
              +  +          ++ + +QS  ++ L+ + R++  S+ +  I    A      ++
Sbjct: 270 FTDDVIEAMATTPNVCPQLHMPLQSGSDKVLKAMKRSYRKSKYLGIIEKVRAAMPHAAIT 329

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            D+I   P +T   +E  L         +   +Q +   GT   +M
Sbjct: 330 TDIIVGFPGETEEDFEETLDVVRKARFSNAYTFQYSKRPGTPAAEM 375


>gi|154483626|ref|ZP_02026074.1| hypothetical protein EUBVEN_01330 [Eubacterium ventriosum ATCC
           27560]
 gi|149735536|gb|EDM51422.1| hypothetical protein EUBVEN_01330 [Eubacterium ventriosum ATCC
           27560]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 78/260 (30%), Gaps = 15/260 (5%)

Query: 2   KYLSAYENNMTGQGSNSLG-----VYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSF 55
           +YL   +         +L       Y+     C K C YC        Y+  +  ++   
Sbjct: 104 EYLKDVDFLAAANAPRNLSTMGSYAYLKIAEGCDKHCTYCIIPKVRGNYRSVKMEYLIDE 163

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             ++                  G    +   +++ ++L  +AK   +       +   P 
Sbjct: 164 AKKLAEQGVKELILVAQETTMYGKD--IYGKKSLHILLKELAKISGIYWIR--ILYCYPE 219

Query: 116 SVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
            +           K   N + L +Q   +  L+ +GR     +    I   R   P +  
Sbjct: 220 EIYDELIDVIASEKKICNYLDLPIQHASDTILKKMGRRTTNKDLRDIIGKLRKRIPDIVL 279

Query: 174 D--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              LI   P +T    ++ L        + L ++  + E+ T    M    D     E+ 
Sbjct: 280 RTTLITGFPGETEEDHQINLDFVNEMEFERLGVFTYSAEENTPAANMPNQID-EEVKEDR 338

Query: 232 AVDLYNLTQSITSAHGLHAY 251
             D+  L Q I   +     
Sbjct: 339 RNDIMELQQDIVFDNSEKHI 358


>gi|295676688|ref|YP_003605212.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. CCGE1002]
 gi|295436531|gb|ADG15701.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. CCGE1002]
          Length = 473

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++    + +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHRYRVRS-VENVLEEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 262

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  +  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 263 AEEIARGMGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 313

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  ++ A       + + 
Sbjct: 314 LNVKKGLRTDIARRFAQDCRTLGIKVHGTFIIGLPGETQETIQKTIEYAKEINPLTIQVS 373

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y  
Sbjct: 374 LAAPYPGTRLYNQ 386


>gi|296125881|ref|YP_003633133.1| RNA modification enzyme, MiaB family [Brachyspira murdochii DSM
           12563]
 gi|296017697|gb|ADG70934.1| RNA modification enzyme, MiaB family [Brachyspira murdochii DSM
           12563]
          Length = 435

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 20/213 (9%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C YC    H R   V ++++       ++ +++L    +      G    
Sbjct: 143 IPISHGCNNWCTYC-IVPHTRGKMVSRKSY-----EIIEELKRLIDDGAKEITLLGQNVN 196

Query: 82  SL-IEPQN---IALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRKAG--VNR 132
           S  ++  N      +L  I K     S  ++ I    ++P   + +              
Sbjct: 197 SYGLDIDNEINFTELLYKIDKVIDEKSKNKVWIRFLTSHPKDFDKDLADAIWNLNSLCKH 256

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEME 190
           I L  QS  ++ L+ + R +   E +  +   R+      +S D+I     +T  ++   
Sbjct: 257 IHLPFQSGSDRILKLMNRKYTKEEYLTKVSYLRDYAKDFPISTDVIVGYADETEDEYNET 316

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           L+   S   +   LY+ +  +G++ YK   + D
Sbjct: 317 LELLESIGFEEAYLYKYSEREGSIAYKKRVEYD 349


>gi|40063022|gb|AAR37878.1| molybdenum cofactor biosynthesis protein A [uncultured marine
           bacterium 560]
          Length = 331

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 65/168 (38%), Gaps = 19/168 (11%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C YC   D  +H  R +V      +  +  ++   +L     ++ +   GG P L+
Sbjct: 23  CNYRCHYCRDEDHQTHTTRSEVLS---FEEIVKIVRLFAELG----VTKVRLTGGEP-LL 74

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
                  ILD       +    EI +  N + +  +     +  G+NR+++ + SL  + 
Sbjct: 75  R----RDILDLTRMLGDIPGLTEIPLSTN-AHLLPSFAGKLKNHGINRVNISIDSLIPER 129

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR---MSFDLIYALPKQTMTQWEM 189
            + + R+ + ++ I  I  A         ++  ++  +  + +     
Sbjct: 130 FKEITRDGDLAKVIKGIDAAIAAGMSPVKLNMVVMKGINDEEIESMID 177


>gi|310642493|ref|YP_003947251.1| iron-only hydrogenase maturation protein hyde [Paenibacillus
           polymyxa SC2]
 gi|309247443|gb|ADO57010.1| Iron-only hydrogenase maturation protein HydE [Paenibacillus
           polymyxa SC2]
          Length = 339

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 57/192 (29%), Gaps = 16/192 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N    RY++  E  +           +L     +             
Sbjct: 46  CRQDCMYCGLRASNKQADRYRLQPEEILACCAEG----YELGYRTFVLQSGEDY----WF 97

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  ++  I   +      ++ +  +    +   ++   +AG +R  L  ++     
Sbjct: 98  TAARLTKLIREIKSRF-----ADVAVTLSIGERDDETYERLYEAGADRFLLRHETASPSL 152

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L          + +   + I  ++    +  LP QT ++   +L    S + D + +
Sbjct: 153 YAKLHPTMTIESRRSRLLALQRIGFQIGAGCMVGLPGQTNSELADDLVYLHSLSPDMIGI 212

Query: 205 YQLTIEKGTLFY 216
                   T   
Sbjct: 213 GPFLPHSNTPLR 224


>gi|302343497|ref|YP_003808026.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
 gi|301640110|gb|ADK85432.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
          Length = 297

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 74/204 (36%), Gaps = 10/204 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C   ++  +    ++   Q+   ++++ ++    R    +F   G   ++  
Sbjct: 33  CSHNKCAFCG--TYYDKRFGIKDR--QTLEQDLRFAQKHC--RRQDRVFVMDGDALIMPM 86

Query: 87  QNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +   +L  I +       V       + +    ++ +  R+ G+  +  GV+S     L
Sbjct: 87  AHWEWLLGQIREKLPWVRRVGSYANSKSIAMKSDDDLRRLRELGLGILYYGVESGHPDVL 146

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           R + +  +  + I     A+    ++S  ++  +    ++        Q   +   D++ 
Sbjct: 147 RDIKKGADPEKLITQGRRAKAAGMKVSVTVLLGVGGAERSQEHARATGQLLTAMDPDYVG 206

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLP 227
              L +  GT     H  G   LP
Sbjct: 207 ALTLMLIPGTPMGDAHAAGQFKLP 230


>gi|262194544|ref|YP_003265753.1| radical SAM protein [Haliangium ochraceum DSM 14365]
 gi|262077891|gb|ACY13860.1| Radical SAM domain protein [Haliangium ochraceum DSM 14365]
          Length = 540

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 75/231 (32%), Gaps = 24/231 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C F      +   Q  +   +    + +   +  G + I ++      P    
Sbjct: 239 CPFTCKFCSFP-----FASPQWRYKSARKIANDWREYAEKNGAQVIKAMDSTFTVP---- 289

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEE 142
                  L    +   +   V I  EA                  A    +S+G +SL E
Sbjct: 290 -------LTRFRELLELLPEVGINWEAYTRANVIKSAEIVDALEAAHCQTLSIGFESLSE 342

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS-YAVDH 201
            +L+ + +   A++   A  L            I   P +T+  +    Q  +  Y   H
Sbjct: 343 ATLKHMNKRVRATDNQRAHELLSKSGVDFRGSFIIGYPGETLDDFAKTRQFLVEDYTARH 402

Query: 202 --LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             LS++ LT E   ++    +    V   ++   +  ++   + +A  +H 
Sbjct: 403 FMLSVFSLTDETMPVWQDAERYQLEVSDLDDPDANWKHVGMDVATARRMHQ 453


>gi|312143066|ref|YP_003994512.1| Radical SAM domain protein [Halanaerobium sp. 'sapolanicus']
 gi|311903717|gb|ADQ14158.1| Radical SAM domain protein [Halanaerobium sp. 'sapolanicus']
          Length = 350

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC     NS + RY++ +E  I +         +L     +            
Sbjct: 65  YCKQNCHYCGLRKDNSELERYQLEKEEIITAA----NQAAELGYKTIVIQSGEDDY---- 116

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              Q IA I+  I  N  ++    +T+        V     +++AG +R  L  ++ +++
Sbjct: 117 -PAQKIAEIIREIKHNNDIA----VTLSLGERDFGVYKL--WKEAGADRYLLKHETADKK 169

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +      +    I ++   + +  +    +I  LP Q       +L       VD + 
Sbjct: 170 LYQKYHPGMSFENRIESLKYLKYLGYQTGSGVIIGLPGQNAETLAEDLSLLKELDVDMVG 229

Query: 204 LYQLTIEKGTLFYK 217
                  + T    
Sbjct: 230 SGPFIPHQNTPLKN 243


>gi|282855982|ref|ZP_06265273.1| ribosomal protein S12 methylthiotransferase RimO [Pyramidobacter
           piscolens W5455]
 gi|282586201|gb|EFB91478.1| ribosomal protein S12 methylthiotransferase RimO [Pyramidobacter
           piscolens W5455]
          Length = 434

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 27/225 (12%)

Query: 28  CVKKCPYCDFNSHVRR-YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPSL 83
           C  +C YC       R   V  E  +      +    +           +G    G PS 
Sbjct: 145 CNSRCSYCAIPGIRGRLRSVPVEQIVGEARRLVDEGAKELCLVGQELSIYGSDLFGRPS- 203

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR--ISLGVQSLE 141
                +  +LD + K              +PS V+    +    + V    + + +Q ++
Sbjct: 204 -----LPRLLDELEKELPR-GVWLRLFYLHPSLVDAVFLERVAASPVILPWLDIPIQHVD 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD------LIYALPKQTMTQWEMELQRAL 195
           +  LR + R          I         ++ D      L+   P +T  Q++  L    
Sbjct: 258 DDVLRRMNRPP----VERHIRELFARGREINPDFAFRTTLMVGFPGETRAQFDKLLDFVE 313

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               D L  +  + E GT            +P E        L +
Sbjct: 314 EIGFDRLGAFPYSPEDGTPAASFPD----QIPEEEKTARYNELME 354


>gi|262277882|ref|ZP_06055675.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
 gi|262224985|gb|EEY75444.1| conserved hypothetical protein [alpha proteobacterium HIMB114]
          Length = 419

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 72/201 (35%), Gaps = 9/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C  +C +C   +        +   I + L +++ + +      I + +      P L E 
Sbjct: 143 CDHRCTFC---TIPYGRGNSRSLPINNILEQIKMLNEKGFNEIILTGVDLTSYGPDLDEK 199

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            N+  +++ I KN      + ++   +   ++   F+        +    L +QS +   
Sbjct: 200 VNLGKLVEAILKNNKELKRLRLS-SLDSIEIDSLLFEILSSEKRVMPHFHLSMQSGDNMI 258

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H    AI   +  +   P +    DLI   P +T   +   L+      +  L
Sbjct: 259 LKRMKRRHQREHAIDFCNKIKLARPEVIFGADLIAGFPTETEEMFHNTLKIIDECDLTLL 318

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++  +  +     KM +   
Sbjct: 319 HIFPFSPMEKAPASKMPQVPK 339


>gi|254975819|ref|ZP_05272291.1| radical SAM superfamily lipoprotein [Clostridium difficile
           QCD-66c26]
 gi|255093205|ref|ZP_05322683.1| radical SAM superfamily lipoprotein [Clostridium difficile CIP
           107932]
 gi|255101369|ref|ZP_05330346.1| radical SAM superfamily lipoprotein [Clostridium difficile
           QCD-63q42]
 gi|255307244|ref|ZP_05351415.1| radical SAM superfamily lipoprotein [Clostridium difficile ATCC
           43255]
 gi|255314948|ref|ZP_05356531.1| radical SAM superfamily lipoprotein [Clostridium difficile
           QCD-76w55]
 gi|255517622|ref|ZP_05385298.1| radical SAM superfamily lipoprotein [Clostridium difficile
           QCD-97b34]
 gi|255650733|ref|ZP_05397635.1| radical SAM superfamily lipoprotein [Clostridium difficile
           QCD-37x79]
 gi|260683819|ref|YP_003215104.1| putative radical SAM superfamily lipoprotein [Clostridium difficile
           CD196]
 gi|260687479|ref|YP_003218613.1| putative radical SAM superfamily lipoprotein [Clostridium difficile
           R20291]
 gi|260209982|emb|CBA63994.1| putative radical SAM superfamily lipoprotein [Clostridium difficile
           CD196]
 gi|260213496|emb|CBE05203.1| putative radical SAM superfamily lipoprotein [Clostridium difficile
           R20291]
          Length = 289

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 92/248 (37%), Gaps = 24/248 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + K  +   ++    E+   R+    + +  IF   G   +I  
Sbjct: 25  CSHNKCTFCS----MYKSKKFKIKPLEVIKNEIDIFRRYY--KHVERIFLADGDALIIPM 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  I+  +           IT+  +P S+E    +  +  RK GV  I LG++S   +
Sbjct: 79  EKLRDII--LYIKEVFPECERITMYGSPKSIEKKSDDELKELRKLGVKMIYLGLESGSNE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +  ++ + I      +    ++S  +I  L    +T        +   + + D+
Sbjct: 137 VLEDIKKGFSSEQLIKVGRKVKKSGIKLSATVIAGLGGTKKTHQHAVDTGKMLGAISPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +  L +E  T  Y      DL+   E   ++   + Q I          I  +  +  
Sbjct: 197 VGVLSLMVEPNTELY------DLLKAGEFTILEDKAVLQEIKEMIKN----IDANEKIVF 246

Query: 262 ESLHNLNY 269
            S H  NY
Sbjct: 247 RSNHASNY 254


>gi|223044380|ref|ZP_03614414.1| conserved hypothetical protein [Staphylococcus capitis SK14]
 gi|222442249|gb|EEE48360.1| conserved hypothetical protein [Staphylococcus capitis SK14]
          Length = 448

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 75/233 (32%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQASQLVNSGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +     +    +   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLDEIEGLERIRISSIEAS--QLTDEVIEVIGNSNKVVRHLHVPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMEHFSERLTELHKALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHQFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D          +      L +  TS       E+
Sbjct: 328 VFPYSPRIGTPAARMDDQIDESVKNERVHKLIALSDQLAKEYTSKFENEVLEV 380


>gi|57640832|ref|YP_183310.1| hypothetical protein TK0897 [Thermococcus kodakarensis KOD1]
 gi|57159156|dbj|BAD85086.1| hypothetical protein, conserved, radical SAM superfamily
           [Thermococcus kodakarensis KOD1]
          Length = 581

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 38/242 (15%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLI-------- 84
           C F +   RY+  ++  ++  + E++ +  L     +     G      S +        
Sbjct: 219 CSFCTEPVRYRRVEDRSVEDVVAEVKALYTLG----VRHFRVGRQSCIFSYMAKPDGRVP 274

Query: 85  --EPQNIALILDGIAKNWT-----VSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISL 135
              P+ +  +  GI             N    + AN         +   + G   + ++ 
Sbjct: 275 IPNPEAVEKLFRGIRSVAPNVKTLHVDNANPAVIANYPDESRRIAKALIEYGTPGDVVAF 334

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----------FDLIYALPKQTMT 185
           G++S + +  +    N  A E   A+ L   I  R             ++I+ LP +T  
Sbjct: 335 GLESADPKVAKLNNLNATAEETYEAVKLLNEIGGRRGYNGMPWLLPGINIIFGLPGETKK 394

Query: 186 QWEMELQRALSYAVD-----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +E+  Q       D      +++ Q+ +  GT  + M     +    + +    Y +  
Sbjct: 395 SYEITFQFLKRLLDDGLMVRRINIRQVVVFPGTPLWHMRDKVKVEKHKKLIQHYRYKIRH 454

Query: 241 SI 242
            I
Sbjct: 455 EI 456


>gi|319955951|ref|YP_004167214.1| tRNA-i(6)a37 thiotransferase enzyme miab [Nitratifractor salsuginis
           DSM 16511]
 gi|319418355|gb|ADV45465.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitratifractor salsuginis
           DSM 16511]
          Length = 434

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 78/256 (30%), Gaps = 32/256 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------GGTP 81
           C KKC +C     V   +  + +   S +  +Q +++     +   I  G      G   
Sbjct: 150 CDKKCTFC----IVPATRGDEISIPSSLI--LQEVKKAVQAGAKEVILLGQNVNNYGRRF 203

Query: 82  SLIEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           S  E +  N   +L  ++    +          +P  ++    + +        +I + +
Sbjct: 204 SAGEDEVRNFTELLKRVSAVEGLERIRFQ--SPHPLHMDDAFLEEFASNPKICPQIHVPL 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L+ + R ++    +       A      +S D+I   P ++   +   ++   
Sbjct: 262 QSGSTRLLKRMKRGYSKEWFLDRCERIRAMVPGVAISTDIIVGFPGESEEDFAETMEVVE 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D +  ++ +    T               E        +             EI++
Sbjct: 322 KVRFDQMFSFRYSPRPMTAAA------------EYEDQIPETVAAERLKRLQSRQDEITD 369

Query: 256 HSFLGAESLHNLNYWR 271
                 E   +  Y+ 
Sbjct: 370 EIMAAQEGRIHEVYFE 385


>gi|284040196|ref|YP_003390126.1| MiaB-like tRNA modifying enzyme YliG [Spirosoma linguale DSM 74]
 gi|283819489|gb|ADB41327.1| MiaB-like tRNA modifying enzyme YliG [Spirosoma linguale DSM 74]
          Length = 437

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                I   LTE + + +      I     + + G    L 
Sbjct: 151 CDRPCSFCA---IPLMRGGHVSRPIDELLTEARSLARRGTKELILIAQDLTYYGLD--LY 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           + +N+A ++D +A    +     I ++ A PS   ++     R      N + + +Q+  
Sbjct: 206 KKRNLADLIDQLADVEGIDW---IRLQYAYPSGFPMDILDVMRNRPNVCNYLDMPLQTGS 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R     +  + I   R   P ++    LI   P +T   ++           
Sbjct: 263 TELLKLMRRGITREKTESLIETIREKVPDITLRTTLIVGHPGETEAMFQETYDFVERMRF 322

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D L ++  + E  T  + M 
Sbjct: 323 DRLGVFTYSHEDDTHSFTMP 342


>gi|302335746|ref|YP_003800953.1| SSU ribosomal protein S12P methylthiotransferase [Olsenella uli DSM
           7084]
 gi|301319586|gb|ADK68073.1| SSU ribosomal protein S12P methylthiotransferase [Olsenella uli DSM
           7084]
          Length = 456

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 20/227 (8%)

Query: 5   SAYENNMTGQGSNSL---GVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM- 59
           +++ N  T +   ++     YV     C + C +C       RY    E  I S +  + 
Sbjct: 137 ASFSNEATSRALRTVEGASAYVKISEGCDRFCAFCAIPRIRGRYASRPEGEILSEVERLM 196

Query: 60  ----QWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
               + +  +     I     GGG         +A +L  +A            +   P 
Sbjct: 197 EGGAREVVLIGQDTGIWGSDLGGGRT-------LAWLLREVAAAVRPYGAWVRVLYLQPE 249

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
            +        R     ++ I + +Q  +E+ L  +GR  +     A     R+  P M  
Sbjct: 250 GMTDELIATIRDTEEVLSYIDIPIQHCDERVLASMGRTGSIDRLRALFDRLRSEIPGMVL 309

Query: 174 DL--IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               +   P +T  Q +  L        D++S++  + E+GT   +M
Sbjct: 310 RTTGMVGFPGETDDQADELLDFFREQEFDYMSVFSYSREEGTKAARM 356


>gi|163737877|ref|ZP_02145293.1| MiaB-like tRNA modifying enzyme [Phaeobacter gallaeciensis BS107]
 gi|161388493|gb|EDQ12846.1| MiaB-like tRNA modifying enzyme [Phaeobacter gallaeciensis BS107]
          Length = 421

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 82/217 (37%), Gaps = 21/217 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 204

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  +     +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 205 ATPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDDNLMQAIATEPRLMPHLHLSLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+    
Sbjct: 260 HGDDLILKRMARRHLRDDAIRFCEEARKLRPEMTFGADIIAGFPTETDAHFENSLKLVSD 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +  L ++  +  +GT   ++    +  L  E  A 
Sbjct: 320 CDLTWLHVFPYSKREGTPAARIPSQVNGPLIKERAAR 356


>gi|89902134|ref|YP_524605.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodoferax
           ferrireducens T118]
 gi|123091133|sp|Q21T29|MIAB_RHOFD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|89346871|gb|ABD71074.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodoferax ferrireducens
           T118]
          Length = 452

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 20/206 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--------RSISSIFFGGG 79
           C K C YC       R +     F    +       Q             +  S   G  
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLADQGVKEITLLGQNVNAWRSRMIGAA 212

Query: 80  TPSLIEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
             S +  +  + A +L+ ++    +     +T  ++P+    +    Y K    V+ + L
Sbjct: 213 --SALSSEMADFATLLEYVSDIPGIERIRYVT--SHPNEFTPSLIAAYDKLPKLVSHLHL 268

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            VQ   ++ L  + R + A E  + +    A      +S D I   P +T   +   ++ 
Sbjct: 269 PVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPDMALSSDFIVGFPGETEDDFSKMMKL 328

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D+   +  +   GT    +H
Sbjct: 329 IDDVGFDNSFSFIFSPRPGTPAANLH 354


>gi|150390308|ref|YP_001320357.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
           metalliredigens QYMF]
 gi|229890435|sp|A6TR80|MIAB_ALKMQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|149950170|gb|ABR48698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
           metalliredigens QYMF]
          Length = 476

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 72/217 (33%), Gaps = 19/217 (8%)

Query: 16  SNSLGV--YVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           +   G+  +++  F C   C YC     +  +  G+E   +     +  + +L    +  
Sbjct: 179 TRKYGLKAFINIMFGCNNFCTYC-----IVPHTRGRERS-REVQEIIDEVEELAKNGTKE 232

Query: 73  SIFFGGGTPSL---IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA 128
               G    S    +E + +   +L  + K   +       + ++P  +  +        
Sbjct: 233 ITLLGQNVNSYGKTLEEETDFGNLLKVLNKIEGIERIRF--MTSHPKDLSDSLISAMTVC 290

Query: 129 G--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTM 184
                 + L  Q+     L+ + R +     +  +   R+  P ++   D+I   P +T 
Sbjct: 291 TKVCAHLHLPFQAGSNDILKAMNRKYTKEAYLELVEKVRSKVPNVALTTDIIVGFPGETE 350

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
             ++  L        +    Y  ++ + T   KM   
Sbjct: 351 DDFKETLNVVEKARFNSAYTYLYSLRQETPAAKMENH 387


>gi|332879558|ref|ZP_08447253.1| ribosomal protein S12 methylthiotransferase RimO [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332682524|gb|EGJ55426.1| ribosomal protein S12 methylthiotransferase RimO [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 448

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 77/220 (35%), Gaps = 10/220 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIEP 86
           C ++C YC       ++       I+  L E++  + +      + +         L   
Sbjct: 161 CDRRCSYCAIPIITGKH---VSRPIEDILDEVRMLVSRGVKEFQVIAQELTYYGLDLYHR 217

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q +  +++ +A    V         A P++  V+ F+  R+       + + +Q + +  
Sbjct: 218 QMLPELIERMADIPGVDWIRLHY--AYPANFPVDLFRVMREKKNVCKYMDIALQHISDNM 275

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R+    E    I   R   P +     L+   P +T   +   L        D +
Sbjct: 276 LQRMHRHVTRQETYDLIERFREEVPGVHLRTTLMVGHPGETEEDFNELLDFVRKVKFDRM 335

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             +  + E+GT   + ++D       +     L  L Q I
Sbjct: 336 GAFAYSEEEGTYSAEHYEDEIPFETKQARLDKLMALQQKI 375


>gi|237798430|ref|ZP_04586891.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021282|gb|EGI01339.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 442

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 74/233 (31%), Gaps = 19/233 (8%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--- 75
             YV     C K   YC F                  L+E+  +    G R ++ +    
Sbjct: 148 SAYVSVMEGCSK---YCTFCVVPYTRGEEVSRPFDDVLSEVTHLADY-GVREVTLLGQNV 203

Query: 76  --FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--V 130
             + G T        +A + D I     V     I     +P     +  Q +      V
Sbjct: 204 NGYRGNT----HDGRVADLADLIRAVAAVDGIDRIRYTTSHPLEFSDSLIQAHADVPQLV 259

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWE 188
             + L VQS  ++ L  + RNH   E  + +    A      +S D I   P +T   +E
Sbjct: 260 KHLHLPVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGISISSDFIVGFPGETEKDFE 319

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             ++       D    +  +   GT    +  D    L  E +A   + L Q 
Sbjct: 320 NTMKLIEDVGFDFSFSFIYSPRPGTPAADLKDDTPEALKKERLAALQHRLNQQ 372


>gi|260789490|ref|XP_002589779.1| hypothetical protein BRAFLDRAFT_125887 [Branchiostoma floridae]
 gi|229274962|gb|EEN45790.1| hypothetical protein BRAFLDRAFT_125887 [Branchiostoma floridae]
          Length = 514

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 36/250 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C   C YC     +  +  G+E   +   + ++ +R L+G         G    S   + 
Sbjct: 172 CDNMCSYC-----IVPFTRGRERS-RPIKSILEEVRALSGQGVKEVTLLGQNVNSYRDMS 225

Query: 86  PQN----------------IALILDGIAKNWTVSS-----NVEITI---EANPSSVEVNN 121
            Q                 I     G  +   +       + E+ I     +P       
Sbjct: 226 EQQHQLADSPTNLSAGFGTIYRKKKGGLRFSALLDRVAQVDPEMRIRFVSPHPKDFPDEV 285

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
            Q  R      N + L  QS   Q L+ + RNH     +  +   + + P +S   D I 
Sbjct: 286 LQLIRDRPNICNHLHLPAQSGSSQVLQSMRRNHTREAYLELVQHVKKVIPDVSLSSDFIV 345

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
               +T       L  A     D+  L+  ++ K T  Y    D       +    +L N
Sbjct: 346 GFCGETEDDHNQTLSLARLVRYDNAYLFAYSMRKKTHAYHKLMDDVPADVKQRRLAELIN 405

Query: 238 LTQSITSAHG 247
           + +   +   
Sbjct: 406 VCRQGMAEAN 415


>gi|160896962|ref|YP_001562544.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Delftia
           acidovorans SPH-1]
 gi|229890511|sp|A9BUQ1|MIAB_DELAS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|160362546|gb|ABX34159.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Delftia acidovorans
           SPH-1]
          Length = 442

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C K C YC       R +     F    +     +  L           G    + +   
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFEDVLIE----VAGLADQGVKEVTLLGQNVNAYLGKM 208

Query: 85  ----EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               E  + AL+L+ +++   +      T  ++P+       + Y +    V+ + L VQ
Sbjct: 209 GDTAEIADFALLLEYVSEIPGIERIRYTT--SHPNEFTPRLIEAYARLPKLVSHLHLPVQ 266

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  + R + A E  + I    A      MS D I   P +T   ++  ++    
Sbjct: 267 HGSDKILMAMKRGYTAMEYKSTIRKLRAIRPEMAMSSDFIVGFPGETEEDFQKMMKLIHD 326

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D+   +  +   GT    +H
Sbjct: 327 VRFDNSFSFIFSPRPGTPAANLH 349


>gi|78357320|ref|YP_388769.1| biotin synthase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. G20]
 gi|78219725|gb|ABB39074.1| iron-only hydrogenase maturation protein HydE [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 337

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 65/193 (33%), Gaps = 19/193 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC                  + L   +   +     +  +   G GT  L   +
Sbjct: 46  CRKNCHYCGL------------RVANTGLERFRLEPEGILAAAALARELGAGTVVLQSGE 93

Query: 88  NIAL----ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++      I D + +   +   +++ +  +    + + +  +R  G +R  L +++ +E 
Sbjct: 94  DLRYDRRVIGDLVRR---IRDTLDVAVTLSLGDFDRDTYAYWRDCGADRYLLKMETFDEA 150

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L      ++ +A + + +++       +I  LP  T      ++ R     ++ ++
Sbjct: 151 LHARLRPGCTVADRLARVEMLQSLGYETGSGIIVGLPGMTDAILAEDIHRLSQLGLEMIA 210

Query: 204 LYQLTIEKGTLFY 216
                    T   
Sbjct: 211 AGPFIPHPSTPLA 223


>gi|303233246|ref|ZP_07319918.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Atopobium vaginae
           PB189-T1-4]
 gi|302480636|gb|EFL43724.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Atopobium vaginae
           PB189-T1-4]
          Length = 459

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 75/238 (31%), Gaps = 24/238 (10%)

Query: 22  YVH--WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           Y H   P    C   C +C     V   +  + + +  F   +  + +L           
Sbjct: 159 YFHAWVPIMTGCNNFCTFC----IVPLVRGRERSRV--FERVVAEVARLVDDGVREVTLL 212

Query: 77  GGGTPSLIEPQNIA---LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
           G    S    +++       + + +             +NP  +  +  +   +    + 
Sbjct: 213 GQNVNSY--GRDLYGKPRFSELLREVGKTGIERIRFTSSNPKDLSHDTIRAMAETPNVMP 270

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEM 189
           ++ L VQS   + LR + R +N  + ++ I   +   P +  S D+I   P +T   +  
Sbjct: 271 QLHLAVQSGSNRILRAMHRAYNREKYLSVIAELKEAIPGIALSTDIIVGFPGETEEDFLQ 330

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
            +             +  +   GT   K+        P E +      LT+ I     
Sbjct: 331 TMSLVDEVGYASAYTFIYSKRPGTPAAKIVDTT----PHEVIQERFERLTKRIEELAY 384


>gi|296171751|ref|ZP_06852910.1| tRNA-I(6)A37 thiotransferase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295893980|gb|EFG73745.1| tRNA-I(6)A37 thiotransferase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 495

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 27/254 (10%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + +++     ++   +V     C   C +C     V   +  + +  +S    + 
Sbjct: 131 ESLQEFPSSLPSARESAYAAWVSVSVGCNNSCTFC----IVPSLRGKEVD--RSPADVLA 184

Query: 61  WMRQLTGPRSISSIFFGGGTP----SLIEPQ------NIALILDGIAKNWTVSSNVEITI 110
            +R L     +     G        S  +P         A +L        +        
Sbjct: 185 EVRALVADGVVEVTLLGQNVNAYGVSFADPALPRDRGAFARLLRACGNIDGLERVRF--T 242

Query: 111 EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
             +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   
Sbjct: 243 SPHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVRAAM 302

Query: 169 PR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL 226
           P   ++ DLI   P +T   +   L             +Q +   GT   ++    D  L
Sbjct: 303 PNAAITTDLIVGFPGETEEDFAATLDVVRQARFAAAFTFQYSKRPGTPAAEL----DGQL 358

Query: 227 PSENVAVDLYNLTQ 240
           P   V      L +
Sbjct: 359 PKTVVQERYDRLIE 372


>gi|268610796|ref|ZP_06144523.1| biotin synthase [Ruminococcus flavefaciens FD-1]
 gi|268611692|ref|ZP_06145419.1| biotin synthase [Ruminococcus flavefaciens FD-1]
          Length = 345

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 17/194 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR     E +  S   E+    +        +    GG  S    
Sbjct: 61  YCKNDCRYCG----IRRSNKEAERYRLS-REEIMSCCENGYELGFRTFVMQGGEDSFFTD 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  ++  I + +    +  IT+     S    +++  ++AG +R  L  ++ + +   
Sbjct: 116 DFLCSVVSEIREKY---PDCAITLSLGERSY--ESYKRLKEAGADRYLLRHEAADPKLYE 170

Query: 147 FLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            L   H A  ++      +   + +  ++    +   P QT      +++   S     +
Sbjct: 171 KL---HPAEMSLRNRKDCLFHLKELGYQVGSGFMVGAPYQTTDSLLYDIRFLQSLQPQMI 227

Query: 203 SLYQLTIEKGTLFY 216
            +        T F 
Sbjct: 228 GIGPFVPHHNTEFA 241


>gi|188591273|ref|YP_001795873.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cupriavidus
           taiwanensis LMG 19424]
 gi|229890506|sp|B2AHA4|MIAB_CUPTR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|170938167|emb|CAP63153.1| isopentenyl-adenosine A37 tRNA methylthiolase, Fe-S protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 450

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F            Q         +++++     G  S
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYRGKMGDTS 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+++ +A+   +      T  ++P        + Y +    VN + L VQ  
Sbjct: 214 --EIADFALLIEYVAEIPGIERIRYTT--SHPKEFTSRLVELYGRCDKLVNHLHLPVQHA 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R ++  E  + I   R + P MS   D I   P +T   ++  +       
Sbjct: 270 SDRILMAMKRGYSVLEYKSIIRRLRALRPDMSMSSDFIVGFPGETDADFDKLMAMIEEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    +H
Sbjct: 330 YDTSFSFIFSPRPGTPAANLH 350


>gi|78188689|ref|YP_379027.1| hypothetical protein Cag_0713 [Chlorobium chlorochromatii CaD3]
 gi|123770879|sp|Q3ASP1|RIMO_CHLCH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|78170888|gb|ABB27984.1| SSU ribosomal protein S12P methylthiotransferase [Chlorobium
           chlorochromatii CaD3]
          Length = 438

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 9/189 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C       RY+      +    T +Q             I   G   +     
Sbjct: 144 CNRICSFCSIPKIRGRYQSQPLEQLLREATRLQQQGVQELNLIAQDISLFGYDTT--GHS 201

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +L    +   +       + A P +  +      R      N + + +Q   ++ L
Sbjct: 202 QLNELLL---RLSDMDFLWIRLLYAYPVNFPLEVIDTMRDRSNICNYLDIPLQHCNDRIL 258

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R    ++ I  +H  R   P +     ++   P +T  ++E  L        D L 
Sbjct: 259 RAMKRGVTKADTIRLLHEMRQRNPNIRLRTTMLVGFPGETRAEFEELLDFVEEQRFDRLG 318

Query: 204 LYQLTIEKG 212
            +    E+ 
Sbjct: 319 CFPYNHEEH 327


>gi|84496889|ref|ZP_00995743.1| hypothetical protein JNB_05180 [Janibacter sp. HTCC2649]
 gi|84383657|gb|EAP99538.1| hypothetical protein JNB_05180 [Janibacter sp. HTCC2649]
          Length = 505

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 75/227 (33%), Gaps = 17/227 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  + +  +     +
Sbjct: 136 LESLERFPSTLPTRRDSAYAAWVSISVGCNNTCTFC----IVPSLRGKEAD--RRPGEIL 189

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL---IEPQ-NIALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L     +     G    +       +     +L        +          +P+
Sbjct: 190 AEIQALVDQGVVEVTLLGQNVNTYGVEFGDRFAFGKLLRACGAIEGLERVRF--TSPHPA 247

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    +  + + +QS  ++ L+ + R++ + + +  I   R   P   +
Sbjct: 248 AFTDDVIAAMAETPNVMPTLHMPLQSGSDKVLKDMRRSYRSEKFLGIIDRVREQIPNAAI 307

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + D+I   P +T   +   L+            +Q +I  GT    M
Sbjct: 308 TTDIIVGFPGETEEDFAETLRVVEQSRFSSAFTFQYSIRPGTPAATM 354


>gi|91977933|ref|YP_570592.1| radical SAM family protein [Rhodopseudomonas palustris BisB5]
 gi|91684389|gb|ABE40691.1| Radical SAM [Rhodopseudomonas palustris BisB5]
          Length = 592

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 81/238 (34%), Gaps = 25/238 (10%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + +++ +      +Q      I+   F        + 
Sbjct: 215 CPYQCSFCTIINVQGRKSRYRTPDDVEALVR--ANWKQGVSKFFITDDNFARNK----DW 268

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  + +   +   + I ++     +  N  +  ++AGV R+ LG++S+  ++L 
Sbjct: 269 EAILDRLIWLKEEQGIPLGLLIQVDTLCHKI-PNFIEKAKRAGVTRVFLGLESINPETLL 327

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
              +  N      A+ LA      ++    I   P  T      ++        +D L  
Sbjct: 328 LANKRQNKITEYRAMLLAWKAQGIITLAGYILGFPADTPESILADIDIIKRELPIDILEF 387

Query: 205 YQLTIEKGT----LFYKMHKDGDLVLPSENVAVDL-------YNLTQSITSAHGLHAY 251
           + LT   G+      +K     D  L   ++               + +      H Y
Sbjct: 388 FCLTPLPGSEDHQKLWKAGIAMDADLNRYDIEHVCTAHQKMSQQAWEDVYQQVWRHYY 445


>gi|295114964|emb|CBL35811.1| Fe-S oxidoreductase [butyrate-producing bacterium SM4/1]
          Length = 290

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 76/215 (35%), Gaps = 9/215 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C+    + + K  +   +   + +++          +  +F   G   +++ 
Sbjct: 25  CAHNTCTFCN----MYKAKDFRVRSMDEIMEDLR-EAHDGYGAYVQKVFLADGDALVLQT 79

Query: 87  QNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  ILD + + +             +         +  ++AG+  + +G +S +++ L
Sbjct: 80  EKLLAILDAVRELFPNCVRVASYGTAQDILRKSEEELRQLKEAGLGIVYVGAESGDDEIL 139

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLS 203
           R + +   A E        +    + S  LI  L  +           +   +   ++ S
Sbjct: 140 REINKGVTARELKEVGQKLKRCGIQTSVTLISGLGGRKKVKEHALACAELITAMNPEYAS 199

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              L + +GT  Y+   +G     + +  VD   +
Sbjct: 200 FLTLRLYEGTPMYEDVVEGRFERITADEIVDEMKI 234


>gi|210610065|ref|ZP_03288244.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
 gi|210152676|gb|EEA83682.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
          Length = 430

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 79/232 (34%), Gaps = 21/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +   +    +  ++    ++ + +L        +  G    S    +
Sbjct: 154 CNQFCTYC----IIPFARGRVRS--RAKEDVVREVTELAANGYQEVVLTGIHLSSYGVDL 207

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEE 142
           E +N+  ++  + +   +      ++E  P  +  +  +     +       L +QS  +
Sbjct: 208 ENENLLSLILAVNEIEGIKRIRLGSLE--PRIITEDFVKTISGLEKMCPHFHLSLQSGCD 265

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           ++LR + R + + E      L R  F    ++ D+I   P +T  ++E            
Sbjct: 266 ETLRRMNRRYTSEEYYEKCMLLRKYFAHPALTTDVIVGFPGETEEEFEKSKAFIDKVDFY 325

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +++ +  +GT         D  +P +        L +          YE
Sbjct: 326 ETHIFKYSKREGT----KAAVMDNQIPEQIKTARSNELLE--LGQKKRIKYE 371


>gi|223939110|ref|ZP_03630994.1| Radical SAM domain protein [bacterium Ellin514]
 gi|223892270|gb|EEF58747.1| Radical SAM domain protein [bacterium Ellin514]
          Length = 510

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 20/220 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C     +    V    F +   L  ++ +      R +    F   T + +  
Sbjct: 173 CPFTCEFC-----LSSLDVPVRQFPLPVLLQNLEELL----SRGVQQFKFVDRTFN-LNL 222

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
                +L            + +  E  P  +     +   K   G  +  +G+Q+   + 
Sbjct: 223 NTSKALLQFFLDR--FRPGLFVHFEMIPDRLPEALREVIAKFPPGALQFEVGIQTFNPEV 280

Query: 145 LRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            + + R  +          L  +    +  DLI  LP +T+  +     R ++     + 
Sbjct: 281 SKLISRRQDYERLADNFRFLREHTGVHIHADLIVGLPGETVESFGEGFDRLVALKPQEIQ 340

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +  L   +GT   +     D            Y + Q+  
Sbjct: 341 VGILKRLRGTPIVR----HDAEWSMTYGEHPPYEILQTKL 376


>gi|160901669|ref|YP_001567250.1| MiaB-like tRNA modifying enzyme [Petrotoga mobilis SJ95]
 gi|160359313|gb|ABX30927.1| MiaB-like tRNA modifying enzyme [Petrotoga mobilis SJ95]
          Length = 434

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLI 84
           C+  C +C   F   ++   +  E  I+S    ++   +++    +  ++ + G   S  
Sbjct: 151 CINSCTFCKIRFLRGLKIVSLPTEEVIKSIEKFIEKGYKEIVLTGT--NLGYYGMDNS-- 206

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEE 142
             + +  +L+ I K++             P  +  N         +    I L +Q   +
Sbjct: 207 --ETLEELLNQIGKSFADKEIRIRITSLYPEIITDNLSTILNSYPIFEKHIHLSIQHFSD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +N      AI   R    + S   DLI   P +      +         V 
Sbjct: 265 KILQSMHRKYNRKMIYTAIENLRKYDSKFSITCDLIVGFPGEDEEDLRILFDSIEELKVL 324

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            +  ++ ++ +GT+  KM   
Sbjct: 325 KVHSFRYSLREGTVAAKMQNQ 345


>gi|148655096|ref|YP_001275301.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseiflexus sp. RS-1]
 gi|148567206|gb|ABQ89351.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseiflexus sp. RS-1]
          Length = 528

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 20/195 (10%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      R+Y+V       +F+ E++    L    
Sbjct: 186 YIYIPLNVRVAVPNFARGCPFTCRFCSQWKFWRKYRVRDPI---AFVDEIEL---LVREY 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            I         P++   + IA+  +   +   V   +   +       +      YR+AG
Sbjct: 240 KIGFFILADEEPTIYRKKFIAMCEELERRKLGVHWGINTRVTDILR--DEKYLPLYRRAG 297

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  + +L    +     +   AI L ++         I  L  +T    E 
Sbjct: 298 LVHVSLGTEAAAQMNLDRFRKETTIEQNKRAIRLLQDQGIVAEAQFIMGLENETPETIEE 357

Query: 190 ELQRALSYAVDHLSL 204
             + AL +  D  + 
Sbjct: 358 TYRFALDWNADMANW 372


>gi|119897069|ref|YP_932282.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Azoarcus sp.
           BH72]
 gi|229890447|sp|A1K3J0|MIAB_AZOSB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|119669482|emb|CAL93395.1| Conserved Hypothetical protein [Azoarcus sp. BH72]
          Length = 449

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 19/218 (8%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           + M          +V     C K   YC F              ++  L E+  + +   
Sbjct: 136 DAMPPARVEGASAFVSIMEGCSK---YCTFCVVPYTRGEEISRPLEDVLAEIAGLAEQG- 191

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-------IEANPSSVEVN 120
              +  +   G   +    + +    +     + +    EI          ++P  +   
Sbjct: 192 ---VKEVTLLGQNVNAWRGEIVRDAGEEGDFAFLLECVAEIPGIERIRYTTSHPREMTQR 248

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
            F  Y K    V+++ L VQS  ++ L  + R ++  E  + +   R   P +S   D I
Sbjct: 249 LFDAYVKIPKLVSQLHLPVQSGSDRILAAMKRGYSVLEFKSIVRKLRAARPDLSLSSDFI 308

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              P +T   +E  ++       D    +  +   GT 
Sbjct: 309 VGFPGETEEDFEKTMKLIDEVGFDGSFSFVYSARPGTP 346


>gi|284929205|ref|YP_003421727.1| 30S ribosomal protein S12P methylthiotransferase [cyanobacterium
           UCYN-A]
 gi|284809649|gb|ADB95346.1| SSU ribosomal protein S12P methylthiotransferase [cyanobacterium
           UCYN-A]
          Length = 439

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 73/233 (31%), Gaps = 21/233 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C +C     +  +  G +      +  +    Q      +  I       +     
Sbjct: 154 CNYRCTFC-----IIPHLRGNQR--SRTIESIVAEAQQLANEGVQEIIIVSQITTNYGLD 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L     +A +L  + K       V     A P+ +     +  ++    +  + L +Q  
Sbjct: 207 LYGKVKLAELLQALGKVNVPWIRVHY---AYPTGLTAEVLKAVKEVPNVIPYLDLPLQHS 263

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R    +     I   R   P +      I   P +T   +E  ++    + 
Sbjct: 264 HPKILKAMNRPWKEAINDEIIKSIRASIPDVVLRTTFIVGFPGETDEYFEHLVKFIKRHH 323

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            DH+ ++  + E+GT  YKM     L +       D     Q   S      Y
Sbjct: 324 FDHVGVFVFSPEEGTPSYKMPDQVPLEI--AQERRDYLMEIQQPISNRKNQQY 374


>gi|257791396|ref|YP_003182002.1| MiaB-like tRNA modifying enzyme [Eggerthella lenta DSM 2243]
 gi|257475293|gb|ACV55613.1| MiaB-like tRNA modifying enzyme [Eggerthella lenta DSM 2243]
          Length = 410

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT------P 81
           C   C YC    HV R +               + R       ++ I  G         P
Sbjct: 138 CDNACTYC--IVHVARGRATSRPADDVVRECASYARAGAREIVLTGINLGSYCDGGRRDP 195

Query: 82  SLIEPQNIALIL---DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISL 135
           S I    +   L            +          P  V+         A       + L
Sbjct: 196 SAIRLAALLRRLLDETADLHAPGEAPARFRVSSIEPRDVDDALIDLLASADGRVCRHLHL 255

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +Q+   + LR + R ++A   +A +       P++  S D+I   P +T  +++  L  
Sbjct: 256 PLQAGSSKVLREMARPYDAERFVALVERLYRRIPQLALSTDIIAGFPGETDAEFQETLDV 315

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A +     +  +  +   GT   + 
Sbjct: 316 ARACRFAKIHAFPYSPRIGTPAAER 340


>gi|256544543|ref|ZP_05471916.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
 gi|256399868|gb|EEU13472.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
          Length = 344

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 11/193 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +R+     E +  SF   +    ++       +    GG     + 
Sbjct: 54  FCKNDCYYCG----IRKSNSNIERYRLSFDEIL-MCAKIGYKLGYRTFVLQGGEDLSYKD 108

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           ++I  I++ I K        +  I  +       +++ + +AG +R  L  +S  +    
Sbjct: 109 EDICKIVEEIKKIHP-----DCAITLSIGERSKKSYKKFFEAGADRFLLREESSSKDHYY 163

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +  +  +      A+   + I  ++    +   P QT      +L+       D + + 
Sbjct: 164 KIHPKEMSFENRRKALFDLKEIGFQVGGGFMVDSPYQTDEDLISDLRFLQKLKPDMIGIG 223

Query: 206 QLTIEKGTLFYKM 218
               +  T F  M
Sbjct: 224 PYLSQHDTPFKNM 236


>gi|283458476|ref|YP_003363102.1| 2-methylthioadenine synthetase [Rothia mucilaginosa DY-18]
 gi|283134517|dbj|BAI65282.1| 2-methylthioadenine synthetase [Rothia mucilaginosa DY-18]
          Length = 504

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  +++  +     +  ++ L    +I     G    S     
Sbjct: 170 CNNTCTFC----IVPSLRGKEKD--RRPGDILAEVQALVDDGAIEVTLLGQNVNSYGVEF 223

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   + +L    +   +          +P+    +      +    +  + + +QS  
Sbjct: 224 GDRQAFSKLLRACGEIEGLERVRF--TSPHPAMFTDDVIDAMAETPNVMPVLHMPLQSGS 281

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++ + + +  +   R   P   ++ D+I   P +T   ++  L+       
Sbjct: 282 DKVLKDMRRSYRSKKFLNILEKVRERIPNAVITTDIIVGFPGETEEDFQDTLKVVEQARF 341

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +I  GT    M
Sbjct: 342 SSAFTFQYSIRPGTPAATM 360


>gi|226306246|ref|YP_002766206.1| tRNA-thiotransferase [Rhodococcus erythropolis PR4]
 gi|226185363|dbj|BAH33467.1| putative tRNA-thiotransferase [Rhodococcus erythropolis PR4]
          Length = 515

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 15/226 (6%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L A+ + +  +  ++   +V     C   C +C       R K                +
Sbjct: 148 LEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC--IVPALRGKEVDRRPGDILAEVQALV 205

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSS 116
            +     ++          S  +P+        A +L        +          +P+ 
Sbjct: 206 DEGVSEVTLLGQNVNAYGVSFADPEQPRDRGAFASLLKACGHIDGLERVRF--TSPHPAE 263

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMS 172
              +  +          ++ + +QS  ++ L+ + R++  S+ +  I    A      ++
Sbjct: 264 FTDDVIEAMATTPNVCPQLHMPLQSGSDKVLKAMKRSYRKSKYLGIIEKVRAAMPHAAIT 323

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            D+I   P +T   ++  L         +   +Q +   GT   +M
Sbjct: 324 TDIIVGFPGETEEDFQETLDVVRKARFSNAYTFQYSKRPGTPAAEM 369


>gi|212223557|ref|YP_002306793.1| hypothetical protein TON_0411 [Thermococcus onnurineus NA1]
 gi|212008514|gb|ACJ15896.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 581

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 38/242 (15%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLI-------- 84
           C F +   RY+  ++  I+  + E++ +  L     +     G      S +        
Sbjct: 219 CSFCTEPVRYRKVEDRSIEDIVREVEVLYNLG----VRHFRVGRQSCIFSYMAKSNGRVP 274

Query: 85  --EPQNIALILDGIAKNWT-----VSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISL 135
              P+ I  +  GI             N    + AN         +   + G   N ++ 
Sbjct: 275 IPNPKAIERLFRGIRLVAPDIKTLHVDNANPAVIANYPEESREIAKALIEYGTPGNVVAF 334

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----------FDLIYALPKQTMT 185
           G++S + +  +    N  A E   A+ L   +  +             ++++ LP +T  
Sbjct: 335 GLESADPKVAKLNNLNATAEETYNAVKLLNEVGGKRGYNGMPWLLPGINILFGLPGETKK 394

Query: 186 QWEMELQRALSYAVD-----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +E+  Q       D      +++ Q+ +  GT  + M          + +    Y +  
Sbjct: 395 SYELTFQFLKKLLDDGLMVRRINIRQVVVFPGTPLWHMRNRVKTEKHKKLIQHYKYKIRH 454

Query: 241 SI 242
            I
Sbjct: 455 EI 456


>gi|77919206|ref|YP_357021.1| biotin synthase [Pelobacter carbinolicus DSM 2380]
 gi|77545289|gb|ABA88851.1| iron-only hydrogenase maturation protein HydE [Pelobacter
           carbinolicus DSM 2380]
          Length = 337

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 64/194 (32%), Gaps = 19/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           FC + C YC     N+ V RY++ ++  +      M++         +       G    
Sbjct: 48  FCDRNCWYCGLRADNTTVERYRMSEDEILDCAHKGMRY----GYGTIVLQSGEDYG---- 99

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +    +  ++  I +   ++  + +   A            ++ AG +R  L  ++    
Sbjct: 100 MSAAWMENVIRRIKRETNLAITLSLGERAG------AELSCWKTAGADRYLLRFETSNRS 153

Query: 144 SLRFLG-R-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
               +  R      + IA +     +   +   ++  +P QT      +++   S  +  
Sbjct: 154 LYDQIHPRCGEKGGDRIALLKKLEELGYEVGSGVMVGIPGQTYEDLANDIELFRSLGLSM 213

Query: 202 LSLYQLTIEKGTLF 215
           + +       GT  
Sbjct: 214 IGVGPYIPHTGTPL 227


>gi|284926662|gb|ADC29014.1| putative radical SAM domain family protein [Campylobacter jejuni
           subsp. jejuni IA3902]
          Length = 439

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 72/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++  + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIGEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|297569111|ref|YP_003690455.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925026|gb|ADH85836.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 431

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 85/224 (37%), Gaps = 27/224 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C +C       + + G   ++    Q  + +++ +  +   R I +  FG      
Sbjct: 206 CPHRCSFC-----CIKGQCG-GRYLTRPEQEVIRDIELLADIPVIRLIDANTFG------ 253

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLE 141
             P+    + + I        N +   +    +V       Q +R+AG+  + +G + L+
Sbjct: 254 -NPEQARRLGEAIRAARL---NKQFLADVRSDTVVNHPELMQLWREAGLRAVIIGFEELD 309

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++ L  + + + A+    A+ + + +   +  D I + P      ++       +  +D 
Sbjct: 310 DRRLTAMNKANRAAINREAVGVLQELGITIVGDFIVS-PGYHEEDFQRLSDYLAASRIDL 368

Query: 202 LSLYQLTIEKGTLFYKMHK----DGDLVLPSENVAVDLYNLTQS 241
             +  LT   GT +++  +    + DL   +   AV    L + 
Sbjct: 369 PIITVLTPLPGTAYHRQQRNEIINHDLDYYTLTNAVTPTRLAEE 412


>gi|291286606|ref|YP_003503422.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290883766|gb|ADD67466.1| Radical SAM domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 780

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 24/221 (10%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    FN+   R+       +   L EMQ++        + S++ G    +  
Sbjct: 196 CEHVCNFCVTPLFNNMRIRFHS-----VDHVLEEMQYLESAG----MDSLWIGDPNFT-- 244

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
                +  ++ + +       +    +     V+ +  +  +KAG++ I  G++S  ++ 
Sbjct: 245 --AYRSRTVELMEQKINRGIRIPFWCQTRVDMVDKDLLKLMQKAGLHCIGFGLESGSDKI 302

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL-- 202
           L  + +  + S     +  A+++   +    +Y  P +T       +     Y +     
Sbjct: 303 LNTMHKEVSISRFHEIVTYAQSLGINVELFSMYGQPGETYEDARKTISIVQKYDIPIYAN 362

Query: 203 -SLYQLTIEKGTLFYKMHKDG-----DLVLPSENVAVDLYN 237
               QL +  G+++ K  +       D  +PS       Y 
Sbjct: 363 SCAQQLQLTCGSMYGKDPEKFGFKVSDKYIPSYLSFWHEYE 403


>gi|224371859|ref|YP_002606025.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfobacterium autotrophicum HRM2]
 gi|223694578|gb|ACN17861.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfobacterium autotrophicum HRM2]
          Length = 289

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 91/239 (38%), Gaps = 11/239 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             KC +C       R+K+ ++  I   + ++++  +    R  + +F   G   +I  + 
Sbjct: 27  HNKCTFCGAYK-GERFKIKKDPVI---MEDIEFAARHC--RRQNRLFICDGDALIIPQRR 80

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  IL+ I +       + +     +         +  R  GV    +G+++ ++ +L+ 
Sbjct: 81  LVPILEQINQRLPWIERIGLYANTKSIRMKSDQELEQLRSLGVKIAYMGLETGDDVTLKA 140

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE--MELQRALSYAVDHLSLY 205
           + +  +A   I      R    ++S  ++  +  +  +        +   +   +++   
Sbjct: 141 INKGADAQRMIEMGRKIRGAGIKLSITVLNGIAGRKRSMIHANETGRVLTAIDPEYVGAL 200

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDL--YNLTQSITSAHGLHAYEISNHSFLGAE 262
            L +  GT  Y  H  G+  L + +  +      ++ +  +    HA   SN+  + AE
Sbjct: 201 SLMLIPGTPMYDSHAKGEFELINPDEILLELGAMISATHLTNGLFHANHASNYLPIRAE 259


>gi|254525252|ref|ZP_05137307.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Stenotrophomonas sp.
           SKA14]
 gi|219722843|gb|EED41368.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Stenotrophomonas sp.
           SKA14]
          Length = 442

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 21/218 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--- 64
           + +    +     +V     C K C +C       R       F    +   Q   Q   
Sbjct: 137 DRLPEPRAEGASAFVSIMEGCSKYCSFC--VVPYTRGTEVSRPFEDVVVEVAQLAAQGVR 194

Query: 65  ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L    +     +G G        ++ L++  IA+   V      T  ++P     +
Sbjct: 195 EINLLGQNVNAYRGPYGDGEF-----ADLGLLIRTIAEIDGVGRIRFTT--SHPLEFSDS 247

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
               +R      N + L VQ+  ++ L  + R + A E  + I   R + P +S   D I
Sbjct: 248 LIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFI 307

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              P +T   +E  ++       DH   +  +   GT 
Sbjct: 308 VGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTP 345


>gi|190573591|ref|YP_001971436.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Stenotrophomonas maltophilia K279a]
 gi|229891009|sp|B2FJ92|MIAB_STRMK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|190011513|emb|CAQ45131.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 472

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 72/218 (33%), Gaps = 21/218 (9%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--- 64
           + +    +     +V     C K C +C       R       F    +   Q   Q   
Sbjct: 167 DRLPEPRAEGASAFVSIMEGCSKYCSFC--VVPYTRGTEVSRPFEDVVVEVAQLAAQGVR 224

Query: 65  ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN 120
               L    +     +G G        ++ L++  IA+   V      T  ++P     +
Sbjct: 225 EINLLGQNVNAYRGPYGDGEF-----ADLGLLIRTIAEIDGVGRIRFTT--SHPLEFSDS 277

Query: 121 NFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLI 176
               +R      N + L VQ+  ++ L  + R + A E  + I   R + P +S   D I
Sbjct: 278 LIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFI 337

Query: 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              P +T   +E  ++       DH   +  +   GT 
Sbjct: 338 VGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTP 375


>gi|31621273|gb|AAP59031.1| BchE [Thiocapsa roseopersicina]
          Length = 551

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 10/178 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C      R+Y+    + F+    T       L    ++  +      P++ + 
Sbjct: 205 CPFTCRFCSQWKFWRKYRHRDPKKFVDEIET-------LVRDYNVGFMILADEEPTIFQK 257

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +AL  + I ++  +   +   +       + N    YRKAG+  +SLG +++ + +L 
Sbjct: 258 KFVALCEELIKRDLPLHWGINTRVTDIMR--DRNLLPLYRKAGLVHVSLGTEAVSQLNLD 315

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +     +   A+ L +          I  L  +T    E   + A  +  D  + 
Sbjct: 316 TFRKQTTVEQNKLAVKLLQQAGIVAEVQFIMGLENETPETIEETYKLAQDWKPDMANW 373


>gi|78186802|ref|YP_374845.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
 gi|78166704|gb|ABB23802.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
          Length = 461

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 69/213 (32%), Gaps = 11/213 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    ++  I+  L EM++ +   G  S+   F          P 
Sbjct: 199 CPVGCSFCTTPTIYGKNYRYRD--IELVLDEMRYHQDRLGRESVHFSFMDDNI--SFRPA 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNRISLGVQSLEEQSLR 146
               +L  + +       +      + + +            G + +S+G +SL  ++L+
Sbjct: 255 YFKELLSHMGRL-----GIRWNANISMNFLHDPEIAELAAWSGCDLMSIGFESLNPETLK 309

Query: 147 FLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N  E  + +          +    ++     +   +++     +   +D     
Sbjct: 310 SVHKGSNRLENYSCVVDNLHMHGIAIQGYFMFGFDNDSAESFQLTYDFIMDNRIDFPVFS 369

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +T   GT +++  K     +  +      Y  
Sbjct: 370 LVTPFPGTPYFEEMKPRLRHMDWDKYDTYHYMF 402


>gi|46202011|ref|ZP_00208348.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 502

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 72/236 (30%), Gaps = 12/236 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       +Y      + +S    +  +        ++         + +  +
Sbjct: 182 CPFRCTFCS-----DQYLSQSVRY-RSIARSVDEIEDKLDRFGVNIFNIRDADFT-MHNE 234

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEV-NNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +    + + +   + + + +TIE +   V   +     +++G + I  G++ L  +  R
Sbjct: 235 RVVEFCNELIRR-GLHNRINLTIETDSFRVIPRDTLALMKQSGFSSIGFGIERLTPEIQR 293

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +N + S  +  +   R +   +S   +      TM     E       A  ++ +  
Sbjct: 294 RIKKNISRSRIMENLKNCRELGFVISVHCLIGFSFDTMEDIAREQALFDELADQYVDIVS 353

Query: 207 LTIE---KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            +I     GT  +               A         +          +  + F 
Sbjct: 354 ASIVVACPGTSEFSAVPPERSSWYLNPSAFPSRRPLYQVVRRFQYDPRHVPIYDFP 409


>gi|311031621|ref|ZP_07709711.1| ribosomal protein S12 methylthiotransferase [Bacillus sp. m3-13]
          Length = 454

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 76/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    Q  +T+ Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPQEVVTQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A++L +   K   +      +IEA+   +     +    +   V  + + +QS     
Sbjct: 210 NFAMLLRELDEKVEGLKRIRISSIEAS--QITDEVIEVLNNSDKIVRHLHIPIQSASNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        +   +   P ++   D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMEFFAERLDRLKEALPGLAITSDVIVGFPGETEEEFMETYNFIKEHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 328 HVFPYSKRTGTPAARMTDQVDEEMKNERVHRLIALSDQLAKEYASTFEEEVLEV 381


>gi|291461037|ref|ZP_06026579.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379315|gb|EFE86833.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium
           periodonticum ATCC 33693]
          Length = 423

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 142 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVSKGAKEIVLLGQNVNSYGKDF 195

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +L+ I K       +   +  +P     +      K       + L +QS  
Sbjct: 196 KNGDNFAKLLEEICKVEG--DYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPLQSGS 253

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q LR + R +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 254 SQVLRKMRRGYTKEKYLALVDKIKSKIPDVALTADIIVGFPGETEEDFLDTVDVVEKVSF 313

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D+  ++  +I KGT    M    D
Sbjct: 314 DNSYMFMYSIRKGTKAATMDNQID 337


>gi|237746577|ref|ZP_04577057.1| tRNA modifying enzyme [Oxalobacter formigenes HOxBLS]
 gi|229377928|gb|EEO28019.1| tRNA modifying enzyme [Oxalobacter formigenes HOxBLS]
          Length = 448

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 20/208 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C K C YC       R       F    +   +   Q       L    +       GG 
Sbjct: 157 CSKYCSYC--IVPYTRGAEVSRRFGDVLVEVAELAGQGVKEITLLGQNVNAYRGEIEGG- 213

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               E  + A++++ IA+   +     +T  ++P          Y +    V+ + L  Q
Sbjct: 214 ----ETADFAMLIETIAEIPGIERIRFVT--SHPREFTQRLIDVYARVPQLVSHLYLPAQ 267

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  + R + A E  + I   + I P   +S D I   P +T   ++  ++    
Sbjct: 268 HGSDRILAAMKRGYTALEYKSIIRRLKAIRPDLLVSSDFIVGFPGETDADFDAMMKLIDE 327

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
              D+   +  +   GT    +  D  L
Sbjct: 328 IGFDNSFSFLYSPRPGTPAAALPMDIPL 355


>gi|312139388|ref|YP_004006724.1| tRNA modification enzyme miab [Rhodococcus equi 103S]
 gi|311888727|emb|CBH48039.1| putative tRNA modification enzyme MiaB [Rhodococcus equi 103S]
          Length = 505

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 81/230 (35%), Gaps = 17/230 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQ 53
           ++ L A+ + +  +  ++   +V     C   C +C           V R        +Q
Sbjct: 135 LESLEAFPSTLPAKRESAYAGWVSISVGCNNTCTFCIVPSLRG--KEVDRRPGDILAEVQ 192

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEA 112
           + + E      L G ++++S       P L   +   A +L    +   +          
Sbjct: 193 ALVNEGVLEVTLLG-QNVNSYGVSFADPELPRDRGAFAKLLSACGQIDGLERVRF--TSP 249

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIF 168
           +P+    +  +          ++ + +QS  ++ L+ + R++ +++ +  I    A    
Sbjct: 250 HPAEFTDDVIEAMATTPNVCPQLHMPLQSGSDRVLKAMRRSYRSAKFLGIIEKVRAAMPH 309

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             ++ D+I   P +T   ++  L             +Q +   GT   +M
Sbjct: 310 AAITTDIIVGFPGETEEDFQATLDVVRQARFTSAFTFQYSKRPGTPAAEM 359


>gi|325672731|ref|ZP_08152427.1| tRNA-I(6)A37 thiotransferase [Rhodococcus equi ATCC 33707]
 gi|325556608|gb|EGD26274.1| tRNA-I(6)A37 thiotransferase [Rhodococcus equi ATCC 33707]
          Length = 505

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 81/230 (35%), Gaps = 17/230 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQ 53
           ++ L A+ + +  +  ++   +V     C   C +C           V R        +Q
Sbjct: 135 LESLEAFPSTLPAKRESAYAGWVSISVGCNNTCTFCIVPSLRG--KEVDRRPGDILAEVQ 192

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEA 112
           + + E      L G ++++S       P L   +   A +L    +   +          
Sbjct: 193 ALVNEGVLEVTLLG-QNVNSYGVSFADPELPRDRGAFAKLLSACGQIDGLERVRF--TSP 249

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIF 168
           +P+    +  +          ++ + +QS  ++ L+ + R++ +++ +  I    A    
Sbjct: 250 HPAEFTDDVIEAMATTPNVCPQLHMPLQSGSDRVLKAMRRSYRSAKFLGIIEKVRAAMPH 309

Query: 169 PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             ++ D+I   P +T   ++  L             +Q +   GT   +M
Sbjct: 310 AAITTDIIVGFPGETEEDFQATLDVVRQARFTSAFTFQYSKRPGTPAAEM 359


>gi|110799375|ref|YP_696330.1| radical SAM domain-containing protein [Clostridium perfringens ATCC
           13124]
 gi|170763908|ref|ZP_02900164.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
 gi|110674022|gb|ABG83009.1| radical SAM domain protein [Clostridium perfringens ATCC 13124]
 gi|170712454|gb|EDT24636.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 559

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 25/203 (12%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R          + L       +    DLI  LP + +  ++       +   
Sbjct: 287 NEVLHNINRYITYENIKEKV-LKVAAGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRP 345

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
           D + L  L + KG+   +  +  
Sbjct: 346 DEIQLGFLKLLKGSSMREEAEKW 368


>gi|28572773|ref|NP_789553.1| hypothetical protein TW627 [Tropheryma whipplei TW08/27]
 gi|81629788|sp|Q83HG3|MIAB_TROW8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|28410906|emb|CAD67291.1| conserved hypothetical protein [Tropheryma whipplei TW08/27]
          Length = 470

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            +L  + +++  +  ++   +V     C   C +C     V   +  + +  +     + 
Sbjct: 126 DFLETFPSSLPVRRESNYSAWVSISVGCNNTCTFC----IVPSLRGKERD--RRPGDILA 179

Query: 61  WMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            +  L     +     G    +      +    A +L        +          +P++
Sbjct: 180 EISALVSEGVLEVTLLGQNVNTYGVEFGDRSAFASLLRKAGAIEGLERLKF--TSPHPAA 237

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
              +           + ++ + +QS  ++ LR + R++ A + +  I  ARN  P ++  
Sbjct: 238 FTSDVIDAMHDTQAVLPQLHMPLQSGSDRILRAMRRSYRAGKFLKIISEARNKIPNIAIT 297

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            D+I   P +T   ++  L             +Q +   GT    M   
Sbjct: 298 TDIIVGFPGETEEDFQDTLNLVAEVRFASAFTFQYSPRPGTPAASMPNQ 346


>gi|88809161|ref|ZP_01124670.1| hypothetical protein WH7805_05696 [Synechococcus sp. WH 7805]
 gi|88787103|gb|EAR18261.1| hypothetical protein WH7805_05696 [Synechococcus sp. WH 7805]
          Length = 497

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 21/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC            Q     +   EM+ +    G + I+ +      +G   P 
Sbjct: 202 CNERCTYC---VVPSVRGKEQSRLPDAIRLEMEGLAAQ-GFKEITLLGQNIDAYGRDLPG 257

Query: 83  LIEP----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           +         +  +L  +     +      T  ++P                      + 
Sbjct: 258 ITPEGRRQHTLTDLLHHVHSVEGLERIRFAT--SHPRYFTERLIDACADLPKLCEHFHIP 315

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRA 194
            QS +   LR + R +        I   R+  P   +S D+I A P +T  Q+   L   
Sbjct: 316 FQSGDNDVLRAMARGYTVERYRRIIDRIRDRMPDASLSADVIVAFPGETDAQYRRTLALI 375

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                D ++    +    T       D  L   ++   +   N      +      Y
Sbjct: 376 EEIGFDQVNTAAYSPRPNTPAAN--WDNQLSEDTKVERLREINALVERCARERNERY 430


>gi|319786436|ref|YP_004145911.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464948|gb|ADV26680.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 484

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 68/200 (34%), Gaps = 16/200 (8%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSL 83
           C  YC F      R       F    +   Q   Q  G R I+ +      + G      
Sbjct: 197 CSKYCSFCVVPYTRGTEVSRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGPMGEGT 254

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E  ++ L++  IA+   +      T  ++P     +  + YR      N + L VQS  
Sbjct: 255 EEVADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVEAYRDVPQLANYLHLPVQSGS 312

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R +   E    I   R + P +S   D I   P +T   +E  ++       
Sbjct: 313 DRILGAMKRGYTTLEFKQKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDVGF 372

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D    +  +   GT    + 
Sbjct: 373 DQSFSFIYSRRPGTPAADLP 392


>gi|303234502|ref|ZP_07321139.1| radical SAM protein, TIGR01212 family [Finegoldia magna BVS033A4]
 gi|302494336|gb|EFL54105.1| radical SAM protein, TIGR01212 family [Finegoldia magna BVS033A4]
          Length = 293

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 74/224 (33%), Gaps = 29/224 (12%)

Query: 28  CVKK-----CPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C  +     C +C         FN +  + +V           +++ + +        + 
Sbjct: 32  CPNRKNSNGCIFCSESGSGEFTFNKNSIKDQV---------ELQIKRLSEKKKADKFIA- 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +      +  I     +N  V   + + I      ++    Q           
Sbjct: 82  YFQSFTNTYKPVNELRKIYSDAIENENV---LVLDIATRGDCLDDEKIQLLSDINKEVDV 138

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G+QS ++ ++  + R ++            +   ++   +I  LP +T   +   +
Sbjct: 139 WVEMGLQSTKKSTVELINRAYSNEVYFDMAKKLMDNGIKVITHVIAGLPYETEDDFLESV 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            +   + +  + ++ L I+  +  Y  ++     + + +   D 
Sbjct: 199 YQTQIHDIWGIKIHSLYIQTDSRLYDYYQKNKFKILTMDEYTDW 242


>gi|28493577|ref|NP_787738.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Tropheryma
           whipplei str. Twist]
 gi|81437721|sp|Q83FT9|MIAB_TROWT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|28476619|gb|AAO44707.1| unknown [Tropheryma whipplei str. Twist]
          Length = 470

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
            +L  + +++  +  ++   +V     C   C +C     V   +  + +  +     + 
Sbjct: 126 DFLETFPSSLPVRRESNYSAWVSISVGCNNTCTFC----IVPSLRGKERD--RRPGDILA 179

Query: 61  WMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            +  L     +     G    +      +    A +L        +          +P++
Sbjct: 180 EISALVSEGVLEVTLLGQNVNTYGVEFGDRSAFASLLRKAGAIEGLERLKF--TSPHPAA 237

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
              +           + ++ + +QS  ++ LR + R++ A + +  I  ARN  P ++  
Sbjct: 238 FTSDVIDAMHDTQAVLPQLHMPLQSGSDRILRAMRRSYRAGKFLKIISEARNKIPNIAIT 297

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            D+I   P +T   ++  L             +Q +   GT    M   
Sbjct: 298 TDIIVGFPGETEEDFQDTLNLVAEVRFASAFTFQYSPRPGTPAASMPNQ 346


>gi|29347563|ref|NP_811066.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572024|ref|ZP_04849428.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29339463|gb|AAO77260.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251838204|gb|EES66291.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 443

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   + S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTVASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSRSRRFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 KLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETEEYFEQAYQFISGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|87310113|ref|ZP_01092245.1| probable MiaB protein-putative tRNA-thiotransferase
           [Blastopirellula marina DSM 3645]
 gi|87287103|gb|EAQ79005.1| probable MiaB protein-putative tRNA-thiotransferase
           [Blastopirellula marina DSM 3645]
          Length = 475

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 61/207 (29%), Gaps = 15/207 (7%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
                 YV     C K C YC     V   +  ++   +     +   R L    ++   
Sbjct: 156 PTPFQAYVRIQIGCDKFCTYC----IVPSVRGPEQG--RRPEDILAETRHLADQGTVEIT 209

Query: 75  FFGGGTPSLIEPQNI---ALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG- 129
             G    S            + D +A    +     I    N P  +        R+   
Sbjct: 210 LVGQTVNSYRGQDAAGKSWNLADLLAAIHEIDGIRRIKFVTNYPKDMTDELLTAVRELDK 269

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQ 186
               + +  QS     L+ + R +   +    +   R       +S D I     +T  +
Sbjct: 270 VSPYLHVPAQSGSNDMLKRMKRGYTVEQYRDMMRRIREGVPGAAVSSDFIVGFCGETEAE 329

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGT 213
           ++M +         +  +++ +  +GT
Sbjct: 330 FQMTVDLVEECRFKNSFIFKYSEREGT 356


>gi|269216963|ref|ZP_06160817.1| radical SAM domain protein [Slackia exigua ATCC 700122]
 gi|269129770|gb|EEZ60854.1| radical SAM domain protein [Slackia exigua ATCC 700122]
          Length = 352

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 65/190 (34%), Gaps = 11/190 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +CV  C YC     +RR     + +  +    ++ + +  G    + +  GG  P     
Sbjct: 65  YCVNDCLYCG----LRRSNGRADRYRLTPDQILECVEEGYGIGYRTFVLQGGEDP-RFTD 119

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  ++  I       S+  +T+     S    +++    AG +R  L  ++       
Sbjct: 120 DMLCAVVSTIKDRH---SDCAVTLSLGERS--RASYRRLFDAGADRYLLRHETASPDHYA 174

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L  R+ +  + +  +   R+I   +    +   P Q   +   +L+    +  +   + 
Sbjct: 175 MLHPRSMSYEKRMRCVSDLRDIGYAVGLGFMVGSPGQGPRELARDLKLIEEFRPEMCGIG 234

Query: 206 QLTIEKGTLF 215
                  T F
Sbjct: 235 PFVPHHATPF 244


>gi|260888390|ref|ZP_05899653.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|330838294|ref|YP_004412874.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260861926|gb|EEX76426.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|329746058|gb|AEB99414.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 346

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR     E + +    E+  + Q        ++   GG       +
Sbjct: 61  CRRSCFYCG----LRRENERAERY-RLRSQEIVRLAQNARGYGYRTVVLQGGEDGYWHVE 115

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A IL  I           + I  +        ++  ++AG +R  L +++ + +    
Sbjct: 116 RLAPILREIRALG-------LVITLSIGERTEEEYRALKEAGASRFLLRIETTDRELYER 168

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L    +     A +   R +   +    +  LP Q++     ++        D + +   
Sbjct: 169 LDPGMSWEARRACLASLRALGYEVGTGSLVGLPGQSVESLARDILFFQEIDADMVGIGPF 228

Query: 208 TIEKGTLF 215
                T  
Sbjct: 229 IPNGDTPL 236


>gi|291614792|ref|YP_003524949.1| radical SAM domain protein [Sideroxydans lithotrophicus ES-1]
 gi|291584904|gb|ADE12562.1| Radical SAM domain protein [Sideroxydans lithotrophicus ES-1]
          Length = 503

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 24/233 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C  KC +C   S + +  +  +  +  FL EM  + Q           F     +  +  
Sbjct: 173 CPFKCEFC--LSSLDKTSLAFD--LDRFLDEMDKLYQRGAR------LFKFVDRTFNLNI 222

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR---KAGVNRISLGVQSLEEQ 143
           +    IL+   +   +   + +  E  P  +     +        G  +  +G+Q+   +
Sbjct: 223 KTGVRILEFFLER--LDDKLFVHFEVIPDHL-PEQLKALIVKFPVGSLQFEVGIQTFNPE 279

Query: 144 SLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               + R  + ++    +    +     +  DLI  LP + +        R ++     +
Sbjct: 280 VQALISRKQDTAKTEENLRWLQQESHAHVHVDLIIGLPGEDVASIADGFDRLIALKQQEI 339

Query: 203 SLYQLT------IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
               L       I + T  Y M                 +   Q +       
Sbjct: 340 QAGVLKRLRGTPIIRHTEAYAMRYTPYPPYTILATDRIDFPTMQRLVRFARYW 392


>gi|269837323|ref|YP_003319551.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
           20745]
 gi|269786586|gb|ACZ38729.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
           20745]
          Length = 449

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 66/206 (32%), Gaps = 18/206 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     + R +    N   +    ++ +++         +  G    +   P+
Sbjct: 159 CRAHCTYC----IIPRARGAPRNVAPA--EVVRRVQEAIDEGYREVVLTGTHVGTYKWPE 212

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +A +L+ + +  T+           P  ++   F            + + +QS 
Sbjct: 213 GDRTLRLADLLELVLEATTIERLR--VTSVGPHEID-ERFIALVNHPRMAPHLHMALQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            E  LR + R +N  +   A+   R   P ++   D+I   P +T  ++           
Sbjct: 270 SETVLRRMKRWYNTRQFRRAVRRLREEVPDIAITTDVIVGFPGETDEEFAETCDFVREMG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL 224
              L ++  +  K T    M      
Sbjct: 330 FAKLHVFPFSPRKDTPAAAMPDQVHP 355


>gi|297587227|ref|ZP_06945872.1| radical SAM protein [Finegoldia magna ATCC 53516]
 gi|297575208|gb|EFH93927.1| radical SAM protein [Finegoldia magna ATCC 53516]
          Length = 293

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/224 (10%), Positives = 74/224 (33%), Gaps = 29/224 (12%)

Query: 28  CVKK-----CPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C  +     C +C         FN +  + +V           +++ + +        + 
Sbjct: 32  CPNRKNSNGCIFCSESGSGEFTFNEYSIKDQV---------ELQIKRLSEKKKADKFIA- 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +      +  I     +N  V   + + I      ++    +   +       
Sbjct: 82  YFQSFTNTYKPVNELRKIYSDAIENKNV---LVLDIATRGDCLDDEKIKLLSEINKKVDV 138

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G+QS +  ++  + R ++            +   ++   +I  LP ++   +   +
Sbjct: 139 WVEMGLQSTKNSTIDLINRAYSNEVYFDMAKKLMDNGIKVISHVIAGLPYESEDDFLESV 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            +   + +  + ++ L I+  +  Y  ++     + + +   D 
Sbjct: 199 YQTQKHDIWGIKIHSLYIQTDSRLYDYYQQNKFKILTMDEYTDW 242


>gi|218778962|ref|YP_002430280.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760346|gb|ACL02812.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 393

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 95/277 (34%), Gaps = 41/277 (14%)

Query: 28  CV-KKCPYC-----DFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSISSIF- 75
           C   +C +C        S   +  V ++      +++  L  ++   ++T      ++  
Sbjct: 41  CPWNRCTFCPVYKGSQFSLRSKDHVIEDIEAVHRYLERILPMLEKQDRITHQELQEAVRT 100

Query: 76  ---------------FGGGTPSLI---------EPQNIALILDGIAKNWTVSSNV-EITI 110
                             G  S+          +P+++  IL  + + +  +  +     
Sbjct: 101 VNPQDPVAYQAAINWINYGMESIFLQDANSLIIKPKDLIEILRHLRRRFPWTKRITSYAR 160

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
               + + + +     +AG+NRI +G++S  ++ L+ + +  + +  + A  L ++    
Sbjct: 161 SHTIARISLEDLTAMAEAGLNRIHIGMESGSDKVLKRVKKGVDKATHVKAGRLVKDAGME 220

Query: 171 MSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +S  ++  L  +  +                D + +  L +      Y+ H++G+  L +
Sbjct: 221 LSEYVMPGLGGRDLSEDHALETADALNRINADFIRIRSLALPPNAPIYQEHQEGNFDLLT 280

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
                    L           +Y  S+H     E+L 
Sbjct: 281 GVETAKELLLFLETLDGIT--SYLKSDHILNLFETLE 315


>gi|218264310|ref|ZP_03478167.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222111|gb|EEC94761.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii
           DSM 18315]
          Length = 440

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + + +   +G + I       G       +
Sbjct: 160 CDYFCSYC---TIPFARGRSRNGTIASMVKQAEEVAA-SGGKEIVLTGVNIGDFGKSTGE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F  + K       + +QS  +  L+ 
Sbjct: 216 TFIDLIRALDEVEGIVRYRISSIEPNLITDEAIDFVAHSKHFAPHFHIPLQSGSDDVLKL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I   + + P   +  D+I     +T T +E       S  +  L ++
Sbjct: 276 MRRRYDTTLFRHKIEKIKEVMPHAFIGVDVIVGTRGETDTYFEDARTFIESLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|328955533|ref|YP_004372866.1| iron-only hydrogenase maturation protein HydE [Coriobacterium
           glomerans PW2]
 gi|328455857|gb|AEB07051.1| iron-only hydrogenase maturation protein HydE [Coriobacterium
           glomerans PW2]
          Length = 365

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 23/196 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF---GGGTPSLI 84
           C   C YC     +RR     E +    L     +        +    F   GG  P   
Sbjct: 82  CRNDCLYCG----IRRSNECAERYR---LQPADIIACTDKGYELGFRTFVMQGGEDP-FF 133

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  +++ I  N       +  I  +       ++Q    AG +R  L  ++  +  
Sbjct: 134 TDEVLCPLIERIKANHP-----DCAITLSLGERTRESYQRLFDAGADRYLLRHETATDAH 188

Query: 145 LRFLGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            R   R H +  ++A     +   + I  +     +   P QT+     ++         
Sbjct: 189 YR---RLHPSELSLATRKACLSNLKEIGYQTGAGFMVGSPYQTVENLADDMLYLDELQPQ 245

Query: 201 HLSLYQLTIEKGTLFY 216
            + +      + T F 
Sbjct: 246 MVGIGPFIPHRDTPFR 261


>gi|170764153|ref|ZP_02633144.2| radical SAM domain protein [Clostridium perfringens E str. JGS1987]
 gi|170661469|gb|EDT14152.1| radical SAM domain protein [Clostridium perfringens E str. JGS1987]
          Length = 559

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 25/203 (12%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R          + L       +    DLI  LP + +  ++       +   
Sbjct: 287 NEVLHNINRYITYENIKEKV-LKVAAGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRP 345

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
           D + L  L + KG+   +  +  
Sbjct: 346 DEIQLGFLKLLKGSSMREEAEKW 368


>gi|220920232|ref|YP_002495533.1| MiaB-like tRNA modifying enzyme [Methylobacterium nodulans ORS
           2060]
 gi|219944838|gb|ACL55230.1| MiaB-like tRNA modifying enzyme [Methylobacterium nodulans ORS
           2060]
          Length = 412

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPS 82
           C  +C +C   F     R    QE   Q+        R++     +    +G      PS
Sbjct: 141 CDHRCTFCVIPFGRGPSRSLPVQEAIAQARALVEDGAREVVLT-GVDLTAYGRDLPEAPS 199

Query: 83  L--IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           L  +    +  + D      +   +VE   +   +              +  + L +Q+ 
Sbjct: 200 LGGLVKAILRALPDLDRLRLSSIDSVEADADLLDALASERRL-------MPHLHLSLQAG 252

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H  ++AIA     R + P + F  DLI   P +T  Q+   +       
Sbjct: 253 DDLILKRMKRRHARADAIAFCETVRRLRPEIVFGADLIAGFPTETEAQFGRSVALVEECG 312

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           + HL ++  +    T   +M +
Sbjct: 313 LAHLHVFPYSPRPETPAARMPQ 334


>gi|325831452|ref|ZP_08164706.1| tRNA methylthiotransferase YqeV [Eggerthella sp. HGA1]
 gi|325486706|gb|EGC89154.1| tRNA methylthiotransferase YqeV [Eggerthella sp. HGA1]
          Length = 417

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT------P 81
           C   C YC    HV R +               + R       ++ I  G         P
Sbjct: 145 CDNACTYC--IVHVARGRATSRPADDVVRECASYARAGAREIVLTGINLGSYCDGGRRDP 202

Query: 82  SLIEPQNIALIL---DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISL 135
           S I    +   L            +          P  V+         A       + L
Sbjct: 203 SAIRLAALLRRLLDETADLHAPGEAPARFRVSSIEPRDVDDALIDLLASADGRVCRHLHL 262

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +Q+   + LR + R ++A   +A +       P++  S D+I   P +T  +++  L  
Sbjct: 263 PLQAGSSKVLREMARPYDAERFVALVERLYRRIPQLALSTDIIAGFPGETDAEFQETLDV 322

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A +     +  +  +   GT   + 
Sbjct: 323 ARACRFAKIHAFPYSPRIGTPAAER 347


>gi|167745633|ref|ZP_02417760.1| hypothetical protein ANACAC_00325 [Anaerostipes caccae DSM 14662]
 gi|167654945|gb|EDR99074.1| hypothetical protein ANACAC_00325 [Anaerostipes caccae DSM 14662]
          Length = 470

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 68/205 (33%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +  L        +  G    S    L
Sbjct: 187 CNNFCSYC-----IVPYVRGRERS-RKPEDIIREIEGLVQEGVREVMLLGQNVNSYGKNL 240

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  I +   ++      +  +P  +     +    +      + L VQS  
Sbjct: 241 DEPVSFAQLLQKIEQIEGLARIRF--MTPHPKDLSDELIEVMASSKKICRHMHLPVQSGS 298

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++     +A     +   P ++   D+I   P +T   +E  L        
Sbjct: 299 SRILKKMNRHYTKESYLALAEKIKEKIPGIAMTTDIIVGFPGETEEDFEETLDVVRKVKF 358

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D    +  +   GT    M    + 
Sbjct: 359 DSAYTFVYSKRTGTPAASMEDQVEP 383


>gi|187924183|ref|YP_001895825.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia phytofirmans PsJN]
 gi|187715377|gb|ACD16601.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia phytofirmans PsJN]
          Length = 473

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHR-YRTRSVENVLAEVKWIRDNMP--EVKEIMFDDDTFTDFKP- 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + +       +        +AN         +  ++ G+  + +G +S ++Q L  
Sbjct: 262 ---RVEEIARGLGKLGVTWSCNAKANVPYAT---LKIMKENGLRLLLVGYESGDDQILLN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A    +  R +  ++    I  LP +T    +  ++ A       + +   
Sbjct: 316 IKKGLRTDIARRFSNDCRTLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  Y  
Sbjct: 376 APYPGTTLYNQ 386


>gi|91779703|ref|YP_554911.1| hypothetical protein Bxe_B0385 [Burkholderia xenovorans LB400]
 gi|91692363|gb|ABE35561.1| conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 473

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHR-YRTRSVENVLAEVKWIRDNMP--EVREIMFDDDTFTDFKP- 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + +       +        +AN   V     +  ++ G+  + +G +S ++Q L  
Sbjct: 262 ---RVEEIARGLGQLGVTWSCNAKAN---VPYPTLKIMKENGLRLLLVGYESGDDQILLN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A       R +  ++    I  LP +T    +  ++ A       + +   
Sbjct: 316 IKKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  Y  
Sbjct: 376 APYPGTTLYNQ 386


>gi|325690967|gb|EGD32967.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK115]
 gi|325695067|gb|EGD36970.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK150]
          Length = 315

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +                  + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDETIAYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRKQAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|310658985|ref|YP_003936706.1| hypothetical protein CLOST_1681 [Clostridium sticklandii DSM 519]
 gi|308825763|emb|CBH21801.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 442

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     +    L ++    ++     +  I       +     
Sbjct: 156 CDNLCTYC----IIPKLRGK---YRSRKLEDIVKEAKVLAASGVKEIIVIAQDTTKYGLD 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +   +++  +L  +     ++    +   + P  ++++     +++    +   + +Q  
Sbjct: 209 IYNEKSLPRLLRELNAIEDLNWIRFLY--SYPEDIDLDLILTVKESDKVCSYFDMPIQHS 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +Q L+ + R          I L R   P       LI   P +T  +++          
Sbjct: 267 HDQVLKRMNRKTTGKHIEDTIALIRAHIPEAVLRTTLITGFPGETDEEFDALYDFVKKIE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            D L ++  + E+GT    +          E     +  L Q I
Sbjct: 327 FDRLGVFAYSKEEGTP-AAIMSGQVAEEIKEERKNKIMQLQQEI 369


>gi|187778779|ref|ZP_02995252.1| hypothetical protein CLOSPO_02374 [Clostridium sporogenes ATCC
           15579]
 gi|187772404|gb|EDU36206.1| hypothetical protein CLOSPO_02374 [Clostridium sporogenes ATCC
           15579]
          Length = 559

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + + I+    E++++      +++  I F   T +     
Sbjct: 183 CPFKCKYC----LSSTLHGVRFHDIERVKKEIKFLV----DKNVKLIKFVDRTFNC---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
           N    ++       + ++     E +   +         K+   RI    GVQ+   + L
Sbjct: 231 NHKFAMEVWEYIINLDTDATFHFEISADLLTKEELDILSKSKEGRIQFEVGVQTTNNEVL 290

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R+ N       +   + +   +   DLI  LP +    +++      S   + + L
Sbjct: 291 KNINRHVNFETIKEKVEELKKLKNIKQHLDLIAGLPGEDYNSFKISFNDVYSVEPEEIQL 350

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L + KG+      +         P   +        + + 
Sbjct: 351 GFLKLLKGSPMRLEAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|19745533|ref|NP_606669.1| hypothetical protein spyM18_0430 [Streptococcus pyogenes MGAS8232]
 gi|139474350|ref|YP_001129066.1| radical SAM superfamily protein [Streptococcus pyogenes str.
           Manfredo]
 gi|19747653|gb|AAL97168.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|134272597|emb|CAM30864.1| radical SAM superfamily protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 306

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 100 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKDTVRRLRHY-PNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 219 LLHLMTNTRMQRDYHEGRLKL 239


>gi|85705226|ref|ZP_01036325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
 gi|85670099|gb|EAQ24961.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
          Length = 446

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F              +   L E + + +  G R I+    ++    G    
Sbjct: 165 CDK---FCAFCVVPYTRGSEVSRPVARVLEEARDLVER-GVREITLLGQNVNAYHGA--- 217

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                   +   I     +     I     +P+ ++ +    +      +  + L VQS 
Sbjct: 218 -GEGGDWGLARLIWALNDIDGLERIRFTTSHPNDMDDDLIAAHGDCAKLMPYLHLPVQSG 276

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R+H A   +  I   R   P   +S D I   P++T   ++  L    +  
Sbjct: 277 SDKILKRMNRSHTAESYLRLIERIRAARPDILISGDFIVGFPEETEEDFQATLDLIEAVT 336

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
             +   ++ +   GT   + 
Sbjct: 337 YGYAFSFKYSTRPGTPAAER 356


>gi|324997385|ref|ZP_08118497.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudonocardia
           sp. P1]
          Length = 492

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 69/242 (28%), Gaps = 23/242 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R K                  +     ++           + + +
Sbjct: 156 CNNTCTFC--IVPALRGKERDRRPGDVLAEVEALAAEGVLEVTLLGQNVNAYGQDMGDRE 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
             + +L        +          +P     +      +      ++ + +QS  +  L
Sbjct: 214 AFSKLLRACGGVEGLERVRF--TSPHPRDFTSDVIAAMAETPNVCPQLHMPLQSGSDAVL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R++ +   +  +   R   P   +S D+I   P +T   ++  L    +       
Sbjct: 272 RRMRRSYRSDRFLRILSDVRESIPHAAISTDIIVGFPGETEEDFQATLDVVAAARFSQAF 331

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS---NHSFLG 260
            +Q +   GT    M    D  LP +        + Q           EIS   N +  G
Sbjct: 332 TFQYSPRPGTPAADM----DGQLPKK--------VVQERYERLVALQEEISWEENRAQEG 379

Query: 261 AE 262
            E
Sbjct: 380 RE 381


>gi|312963219|ref|ZP_07777703.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas fluorescens
           WH6]
 gi|311282485|gb|EFQ61082.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas fluorescens
           WH6]
          Length = 442

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 69/228 (30%), Gaps = 9/228 (3%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C +C       R +     F       +          ++      G
Sbjct: 148 SAYVSVMEGCSKYCTFC--VVPYTRGEEVSRPFDDVLSEIIHLAENGVREVTLLGQNVNG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISL 135
                     +A + + I     V     I     +P     +  Q + +    V  + L
Sbjct: 206 YR-GQTHDGRLADLAELIRVVAAVDGIERIRYTTSHPLEFSDSLIQAHAEVPELVKHLHL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            VQS  ++ L  + RNH A E  + +   R   P +    D I   P +T   ++  ++ 
Sbjct: 265 PVQSGSDRILSAMKRNHTALEYKSKLRKLRAAVPGICISSDFIVGFPGETEKDFQQTMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                 D    +  +   GT    +  +    L  E +    + L Q 
Sbjct: 325 IEDVGFDFSYSFVYSQRPGTPAADLLDETPEALKKERLNALQHRLNQQ 372


>gi|316933167|ref|YP_004108149.1| Radical SAM domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600881|gb|ADU43416.1| Radical SAM domain protein [Rhodopseudomonas palustris DX-1]
          Length = 632

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C   +FN    R +  Q+         +  ++ L     I  I +        
Sbjct: 264 CRARCTFCTVRNFNGFGLRQRTVQD--------VIDEVKHLVTHHGIRYIDWLDDDLLWD 315

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +AL      +   +       + A   +++    Q    +G+    +GV+S  +  
Sbjct: 316 RERTLALFKGLAEQVPGLEWTASNGVIA--VAIDDEIMQAMVASGLRAFKIGVESGNDAM 373

Query: 145 LRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + +     +      L A+     +S + I   P +T  Q       A+  A D  S
Sbjct: 374 LKTIKKPTTKPKLRERARLFAKYPEVFVSTNFIIGFPDETFGQMMDSYDLAVELASDWAS 433

Query: 204 LYQLTIEKGTLFY 216
            Y     KGT  +
Sbjct: 434 FYICQPLKGTEMF 446


>gi|229827041|ref|ZP_04453110.1| hypothetical protein GCWU000182_02425 [Abiotrophia defectiva ATCC
           49176]
 gi|229788659|gb|EEP24773.1| hypothetical protein GCWU000182_02425 [Abiotrophia defectiva ATCC
           49176]
          Length = 335

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 84/232 (36%), Gaps = 19/232 (8%)

Query: 28  CV-KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C+  + ++  K+  E+       E++ +R   G   +  I+ G G+   ++ 
Sbjct: 34  CPYNRCKFCELFTDLKYRKISMED----IENELKRVRSHGGSPKL--IYLGDGSAFQLKA 87

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
             +A I+  + + +  +S      +A  +S+              G N++ +G+++    
Sbjct: 88  SELADIIRLVRRYFPGASA--FNSDATITSILQKSDEELAMLHSLGYNKLYIGIENALPD 145

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY----AV 199
            L F+ ++H+  EA   I          +   +  +      +W+   +    +      
Sbjct: 146 VLEFMDKDHSVEEAYREIERLTQAGFTYAAHFMTGVAG--AGRWKESAKAMAKFLTVTKP 203

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           +++  + + +       K  + G+    +E   +        +   +  H  
Sbjct: 204 ENIVNFSMFLSAD-KLSKEIEAGNFKPATELENLKEERKLVELLEINPEHPI 254


>gi|224371149|ref|YP_002605313.1| Fe-S oxidoreductase family protein [Desulfobacterium autotrophicum
           HRM2]
 gi|223693866|gb|ACN17149.1| Fe-S oxidoreductase family protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 304

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/239 (11%), Positives = 70/239 (29%), Gaps = 12/239 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C      +++ + ++  I+    +++  R++ G R     F  G    +    
Sbjct: 30  CTHRCTFCSMY-LTKKFSMRKD--IEDIKNDIRKAREMFGSRVEKIFFEDGNAFVVKSHV 86

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I L      ++  +          +      ++ +    AG   + +G++S + Q L+ 
Sbjct: 87  LIELTRYCYQQHPNLRKVSSYAHVQDILKKSDDDLKRLADAGFTMVYVGIESGDNQVLKD 146

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY-------AVD 200
             +     +   A           S   +  L      + +     +             
Sbjct: 147 CNKGATQDDYALAAQKCHQAGIDWSGIFLLGLAGNDPEKSQRHAVESAKLINRMAPPMPR 206

Query: 201 HLSLYQLTIE--KGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              +  LT+E   G+     +        +    ++        T          +NH+
Sbjct: 207 KWYISPLTLEMTPGSEILAQNLKNKFQPCTSTQILEELYTLIKNTDDDLTGCIFNTNHA 265


>gi|326790237|ref|YP_004308058.1| hypothetical protein Clole_1131 [Clostridium lentocellum DSM 5427]
 gi|326541001|gb|ADZ82860.1| Conserved hypothetical protein CHP01212 [Clostridium lentocellum
           DSM 5427]
          Length = 307

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 67/228 (29%), Gaps = 18/228 (7%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF           E++I   L+    +  +    +   I +     +   
Sbjct: 44  CLFCSERGSGDF-------TFSDEHYITKQLSMATGLLSVKWGNATKYIAYFQAFTNTYA 96

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
           P  +  +     +       V + I   P  +         +        + LG+Q++ E
Sbjct: 97  P--LEELKQKYEEALAFPGVVGLAIATRPDCLTDEIIAYLGELSTRTHLWVELGLQTIHE 154

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + + + R ++       +             LI  LP +T +      +      +  +
Sbjct: 155 PTAKLINRGYSLDIFYTVVQKLATYSIETVVHLILGLPHETKSDMLASARYLCHLPLQGI 214

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L+ L I   +     ++     L +E   + L     ++     +  
Sbjct: 215 KLHMLHILDNSPLGHYYEAHPFPLLTEEEYIALLGDIITLLPPDFVIH 262


>gi|283851740|ref|ZP_06369018.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
 gi|283572860|gb|EFC20842.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
          Length = 454

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 63/196 (32%), Gaps = 18/196 (9%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC +     + VR     +       + +++  R   G R           P  
Sbjct: 189 CPNACLYCGYPLVEGTIVRHRDPLE------VVEDLRLARDRFGAREFFFTDAVFNDP-- 240

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            E  ++ L    +  N  V           P       +   ++AG+  +  G     ++
Sbjct: 241 -EGGHLHLAEVLVRANLGVRFGAYFQ----PRRTTDAEWTLLKRAGLMAVEAGTDGGCDR 295

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  L + H+  +      +        +  +I+  P +TM   E  L          + 
Sbjct: 296 TLEGLNKPHSMDDVFTFQEMCHAHRVPCAHFVIFGGPDETMETLEEGLANLDRLQGGCVF 355

Query: 204 LY-QLTIEKGTLFYKM 218
            +  L + +GT  +++
Sbjct: 356 AFLGLRLHRGTGLHRL 371


>gi|160893560|ref|ZP_02074344.1| hypothetical protein CLOL250_01114 [Clostridium sp. L2-50]
 gi|156864545|gb|EDO57976.1| hypothetical protein CLOL250_01114 [Clostridium sp. L2-50]
          Length = 332

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 70/196 (35%), Gaps = 9/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC  ++  +     +    +  LT++    +  G      +  G      +  +
Sbjct: 65  CSEDCLYCAQSTRAKDKVPAECVLGEKVLTDIAVQDKCRGSYRYGLVSVGR----RLSKK 120

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + L    ++    +    +I + A+   ++  +F    +AG+  +   +++  ++  + 
Sbjct: 121 EVEL---AVSNVADIRKTADIHVCASLGMLDKEDFTKLHEAGMTMVHNNMET-SDEFFKT 176

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L   H + +   +I  A+    ++    +  L  +T++             VD + +  L
Sbjct: 177 LCTTHTSDDKRKSIRAAKAAGMKVCSGGLIGL-GETLSDRIDLAFSLRELDVDSVPINML 235

Query: 208 TIEKGTLFYKMHKDGD 223
               GT F       +
Sbjct: 236 NPIPGTYFEHQEPMKE 251


>gi|295094832|emb|CBK83923.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coprococcus sp. ART55/1]
          Length = 483

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   ++    +    +L     +  +  G    S    +
Sbjct: 201 CNNFCTYC-----IVPYVRGRERS-RNPEDIIAECERLADDGVVEIMLLGQNVNSYGKNL 254

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  +     +       + ++P  +         +       + L VQS  
Sbjct: 255 EHPITFAELLRRVCAIEKIQRVRF--MTSHPKDLSDELIDVIAENQKICRHLHLPVQSGS 312

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +A +   R   P +S   D+I   P +T   +   +        
Sbjct: 313 TKILNAMNRRYTKESYLALVDRIRAKIPEISLTTDIIVGFPGETEEDFLETMDVVEKVQY 372

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 373 DTAFTFIYSKRTGTPAAGM 391


>gi|109069747|ref|XP_001098819.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           isoform 3 [Macaca mulatta]
          Length = 576

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 79/244 (32%), Gaps = 28/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              L + Q     GT   KM +           A      T+ +  +   H+Y   NH  
Sbjct: 386 FPSLFINQFYPRPGTPAAKMEQVP---------AQVKKQRTKDL--SWVFHSYSPYNHKI 434

Query: 259 LGAE 262
              +
Sbjct: 435 GERQ 438


>gi|42527084|ref|NP_972182.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Treponema
           denticola ATCC 35405]
 gi|81412170|sp|Q73MD3|MIAB_TREDE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|41817508|gb|AAS12093.1| tRNA-i(6)A37 modification enzyme MiaB [Treponema denticola ATCC
           35405]
          Length = 451

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 20/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLIEP 86
           C   C YC     +  Y  G+E  +   + E+         R +  I   G    S    
Sbjct: 162 CNNFCTYC-----IVPYVRGRE--VSRPVNEILQEITELSSRGVREITLLGQNVNSYKGE 214

Query: 87  QNIALILDGIAKNWTVSSNVEIT--------IEANPSSVEVNNFQGYRKAG--VNRISLG 136
                ++D       ++   + T        + ++P  +                 + L 
Sbjct: 215 DGEGRLIDFPKLLTLIAREADKTDMIRWIRFMSSHPKDMSDALIDTIAAEKRLCKLVHLP 274

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQ   +  L+ + R +        I   +   P +  S D++   P +T    +  L   
Sbjct: 275 VQHGSDTILKRMNRVYTIEHYKNRIKRLKETIPDIALSTDILMGFPGETEDDVKATLDLM 334

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
                D   +Y     +GT  +   
Sbjct: 335 QEIEFDSAFMYHYNPREGTKAFNYP 359


>gi|312134799|ref|YP_004002137.1| miab-like tRNA modifying enzyme ylig [Caldicellulosiruptor
           owensensis OL]
 gi|311774850|gb|ADQ04337.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           owensensis OL]
          Length = 440

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 76/244 (31%), Gaps = 28/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC            +  +    + ++    +    +    I       +     
Sbjct: 156 CNNRCSYCS-------IPFIRGKYTSRPIEDIVKEAKELAEKGYQEIILTAQDTTKYGID 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   + +  +L+ +     +     +   + P  ++ N     + +   VN   + +Q +
Sbjct: 209 LYGKKMLPALLEELEGIEKIKWIRFLY--SYPEDLDENLIDVVKSSSKIVNYFDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R          I   R  F  +     ++   P +T  ++E          
Sbjct: 267 NDRILKLMNRKTTKEGIKRLIEKIRRSFDEVVIRTTVLVGFPTETDEEFEELCSFLKWAE 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L  +  + E+GT  +K+ +  +      ++    Y    +I            N   
Sbjct: 327 FDRLGAFMYSQEEGTPAFKLPQVDE------DIKQRRYEKVLNIQRKISKKQ----NRKR 376

Query: 259 LGAE 262
           +G E
Sbjct: 377 VGKE 380


>gi|160939684|ref|ZP_02087032.1| hypothetical protein CLOBOL_04576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437475|gb|EDP15239.1| hypothetical protein CLOBOL_04576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 358

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR       +  S    M+      G    + +  GG  P     
Sbjct: 64  YCKNDCYYCG----IRRSNQKASRYRLSPEQIMECCSIGYGLGFRTFVLQGGEDP-WFTD 118

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + IA +++ + K +    +  +T+       +   ++ +  AG +R  L  ++       
Sbjct: 119 EKIAYLVERMKKQY---PDCAVTLSVGERGYD--TYKRWFDAGADRYLLRHETANPCHYA 173

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     ++      +H  + I  +    ++   P QT      +L+       + + + 
Sbjct: 174 SLHPPQMSSEYRKECLHNLKAIGYQTGCGIMAGSPYQTTAHIAEDLEFMHGLQPEMVGIG 233

Query: 206 QLTIEKGTLFYKMH 219
                  T F    
Sbjct: 234 PFIPHHDTPFKDRP 247


>gi|148244830|ref|YP_001219524.1| tRNA-thiotransferase [Candidatus Vesicomyosocius okutanii HA]
 gi|229891022|sp|A5CW77|MIAB_VESOH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146326657|dbj|BAF61800.1| tRNA-thiotransferase [Candidatus Vesicomyosocius okutanii HA]
          Length = 442

 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 12/213 (5%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQ- 87
           C  YC F                  + E++ +    G R I+ +         S+ + + 
Sbjct: 157 CSKYCTFCIVPYTRGEEISRPFNDVINEVKILASQ-GVREINLLGQNVNAYQGSMNDGEV 215

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++AL+++ +AK   +      T  ++P+    +  + Y +    V+ + L VQS  ++ 
Sbjct: 216 SDLALLINIVAKISGIKRIRYTT--SHPNQFSDSLIEAYAEVPELVSHLHLPVQSGSDKI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R + + E  + I   R I P +S   D I   P +    +   +        D  
Sbjct: 274 LRLMKRGYMSIEYKSKIRKLRKIRPDISISSDFIIGFPGENEKDFLDTMILIDEIGFDKS 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
             +  ++  GT       D D+ +  + +A+  
Sbjct: 334 FSFIYSVRPGTPAASYPDDIDIQVKKQRLALIQ 366


>gi|330995100|ref|ZP_08319017.1| ribosomal protein S12 methylthiotransferase RimO [Paraprevotella
           xylaniphila YIT 11841]
 gi|329576676|gb|EGG58179.1| ribosomal protein S12 methylthiotransferase RimO [Paraprevotella
           xylaniphila YIT 11841]
          Length = 443

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 21/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISSIFFGGGTPSLIEP 86
           C ++C YC       ++       I+  L E++  + +      + +         L   
Sbjct: 156 CDRRCSYCAIPIITGKH---VSRPIEDILEEVRMLVSRGVKEFQVIAQELTYYGLDLYHR 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q +  +++ +A    V         A P++  V+ F+  R+       + + +Q + +  
Sbjct: 213 QVLPELIERMADIPGVEWIRLHY--AYPANFPVDLFRVMREKKNVCKYMDIALQHISDNM 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R+    E    I   R   P +     L+   P +T   +   L        D +
Sbjct: 271 LQRMHRHVTRKETYDLIERFREEVPGIHLRTTLMVGHPGETEEDFNELLDFVRKVKFDRM 330

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +  + E+GT   + +                + + Q+          E+S  
Sbjct: 331 GAFSYSEEEGTYSAEHY-----------EDEIPFEVKQARLDKLMALQQEVSAD 373


>gi|256546099|ref|ZP_05473452.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
 gi|256398216|gb|EEU11840.1| radical SAM domain protein [Anaerococcus vaginalis ATCC 51170]
          Length = 259

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 59/158 (37%), Gaps = 3/158 (1%)

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQ 123
           +T PR I  I+   G P ++  + +  I D I K    V +        N  +    + +
Sbjct: 24  MTYPRPIERIYLLNGDPFVLSTEKLVEIADLIHKYIPEVKTITSYASFYNLKNKTKEDLK 83

Query: 124 GYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PK 181
             R+ G N +  GV++  ++ L +L +  +  +    I   +      +  ++  +    
Sbjct: 84  ILREKGYNELWFGVETGNQKVLDWLDKGADLDDYNKGIEKMKYAGMTYNAIVMQGVAGNG 143

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            +        +    Y    + +    +++G+  YKM 
Sbjct: 144 NSKENARETAKFLNLYPPIGIFIMSTDVQRGSKLYKMR 181


>gi|210622624|ref|ZP_03293284.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275]
 gi|210154125|gb|EEA85131.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275]
          Length = 445

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 64/205 (31%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     +    + ++    +      +  +       +     
Sbjct: 155 CSNHCTYC----IIPKLRGK---YRSRKIEDIVEEAKTLAAEGVKELVVIAQDTTRYGED 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L     +A +L+ +A    +       + + P S+               +   + +Q  
Sbjct: 208 LYGEAKLAELLEELAGIEGIKWIR--IMYSYPESITEKLIDVIAAHDNICSYFDMPIQHA 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R  +  +    + + R+  P   +   +I   P +T    E  ++      
Sbjct: 266 SNRVLKRMNRRTSKEDIRNKVEMIRSKIPDAVIRTTVIVGFPGETEEDLEELIEFMKEIK 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L  +  + E+ T   +M    D
Sbjct: 326 FDRLGAFAYSREEDTPADRMDGHMD 350


>gi|218780003|ref|YP_002431321.1| cobalamin B12-binding domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761387|gb|ACL03853.1| cobalamin B12-binding domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 501

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 16/191 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC           K  +   ++S + E+   R   G R +          S + 
Sbjct: 202 CPFSCTYCEETCIKQKCGPKYFRRKSVKSVMAELTAARAKYGFREVIFKD------SYLS 255

Query: 86  --PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +A ++        +      TI         N     ++ G   I  G+Q+  E 
Sbjct: 256 GDEDWLARLMAEYKSRIRLPFKCFCTISG----FTENTAMLLKQGGCYGIEFGLQTWNEA 311

Query: 144 SLR-FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDH 201
             R  L R    ++A     L      R   D ++ LP ++     +  +       ++ 
Sbjct: 312 IRRDVLNRKETNAQAREVFGLCDAWRLRYDVDHMFNLPGESANDHVLGAREYKKLKYLNR 371

Query: 202 LSLYQLTIEKG 212
           + ++ L    G
Sbjct: 372 IKVHYLVYLPG 382


>gi|37525279|ref|NP_928623.1| tRNA-methylthiotransferase MiaB protein [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|81416679|sp|Q7MB63|MIAB_PHOLL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|36784706|emb|CAE13606.1| tRNA-methylthiotransferase MiaB protein [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 476

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 69/227 (30%), Gaps = 16/227 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F                  L E+  +    G R +     ++    G  + 
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDVLFEIAQLAAQ-GVREVNLLGQNVNAYRGA-TY 213

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               +I    + I     +     I     +P     +    Y      V+ + L VQS 
Sbjct: 214 --DGDICSFAELIRLVAAIDGIDRIRFTTSHPIEFTDDIIAVYEDTPELVSFLHLPVQSG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   +E  ++      
Sbjct: 272 SDRILTLMKRAHTALEYKSIIRKLRKARPDILISSDFIIGFPGETQDDFEKTMKLIADVN 331

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
            D    +  +   GT    +  D       + + +    + Q   S 
Sbjct: 332 FDMSYSFIYSARPGTPAADLPDDVSEEEKKQRLYLLQQRINQQAMSY 378


>gi|87302974|ref|ZP_01085778.1| hypothetical protein WH5701_07366 [Synechococcus sp. WH 5701]
 gi|87282470|gb|EAQ74429.1| hypothetical protein WH5701_07366 [Synechococcus sp. WH 5701]
          Length = 474

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 76/260 (29%), Gaps = 24/260 (9%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  + +  +V+  + C ++C YC   S   + +             ++   + 
Sbjct: 151 LEDITTARRDSQVCAWVNVIYGCNERCTYCVVPSVRGKEQSRSPG-------AIRLEMEG 203

Query: 66  TGPRSISSIF--------FGGGTPSLIE-PQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
              R    I         +G   P +    +    + D +     V+    I     +P 
Sbjct: 204 LAERGFKEITLLGQNIDAYGRDLPGITPQGRRQHTLTDLLHHVHDVAGIERIRFATSHPR 263

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
                      +         +  QS ++  L+ + R +        +   R   P   +
Sbjct: 264 YFTERLIDACAELPKLCEHFHIPFQSGDDDVLKAMARGYTVDRYRRILERIRERMPDAAI 323

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S D+I A P ++  Q+   L    +   D ++    +    T          L    +  
Sbjct: 324 SADVIVAFPGESDAQYRRTLALIEAIGFDQVNTAAYSPRPNTPAADWPD--QLPEAVKVE 381

Query: 232 AVDLYNLTQSITSAHGLHAY 251
            +   N     T+      Y
Sbjct: 382 RLQELNALVERTARQRSERY 401


>gi|226366166|ref|YP_002783949.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodococcus
           opacus B4]
 gi|226244656|dbj|BAH55004.1| putative tRNA-thiotransferase [Rhodococcus opacus B4]
          Length = 525

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 85/270 (31%), Gaps = 24/270 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L A+ + +  +  ++   +V     C   C +C       R K                +
Sbjct: 158 LEAFPSTLPAKRESAYAGWVSISVGCNNTCTFC--IVPALRGKEVDRRPGDILAEVQALV 215

Query: 63  RQLTGPRSISSIFFGGGTPSLIEPQN------IALILDGIAKNWTVSSNVEITIEANPSS 116
            +     ++          S  +P         A +L    +   +          +P+ 
Sbjct: 216 NEGVVEVTLLGQNVNAYGVSFADPDQPRDRGAFAALLRACGEIDGLERVRF--TSPHPAE 273

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MS 172
              +  +   +      ++ + +QS  ++ L+ + R++  S  +  I   R+  P   ++
Sbjct: 274 FTDDVIEAMAETPNVCPQLHMPLQSGSDRVLKAMRRSYRKSRFLGIIEKVRSAMPHAAIT 333

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D+I   P +T   ++  L             +Q +   GT    M    D  LP   V 
Sbjct: 334 TDIIVGFPGETEEDFQDTLDVVRQARFTSAFTFQYSKRPGTPAADM----DDQLPKAVVQ 389

Query: 233 VDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            + Y    ++     L      N   +GAE
Sbjct: 390 -ERYERLIALQEQITLEE----NQKLVGAE 414


>gi|91783752|ref|YP_558958.1| putative methyltransferase, or Fe-S oxidoreductase [Burkholderia
           xenovorans LB400]
 gi|91687706|gb|ABE30906.1| Putative methyltransferase, or Fe-S oxidoreductase [Burkholderia
           xenovorans LB400]
          Length = 473

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHR-YRTRSVENVLAEVKWIRDNMP--EVREIMFDDDTFTDFKP- 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + +       +        +AN   V     +  ++ G+  + +G +S ++Q L  
Sbjct: 262 ---RVEEIARGLGQLGVTWSCNAKAN---VPYPTLKIMKENGLRLLLVGYESGDDQILLN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A       R +  ++    I  LP +T    +  ++ A       + +   
Sbjct: 316 IKKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQDTIQKTIEYAKEINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  Y  
Sbjct: 376 APYPGTTLYNQ 386


>gi|313140558|ref|ZP_07802751.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313133068|gb|EFR50685.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 480

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 78/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 182 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRRCVDEGAKEVTLLGQNVNSFGYGIG-- 236

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L        +          +P++   +      +    ++++ + +QS
Sbjct: 237 ---DRYAFSKLLRACGDIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHMPLQS 291

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   +E  +      
Sbjct: 292 GSDKILRAMRRSYRSAKFLDILRKVREAMPDAQISTDIIVGFPGETDEDFEATMDVVRQA 351

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  ++ +   GT   +M       +    + +      +T+   +       E+
Sbjct: 352 RFQSAFTFEYSPRPGTPAAEMEQVPHEVVQERFDRLVKLQEQITEEELAKFEGRDVEV 409


>gi|311064642|ref|YP_003971367.1| tRNA 2-methylthioadenosine synthase [Bifidobacterium bifidum
           PRL2010]
 gi|310866961|gb|ADP36330.1| tRNA 2-methylthioadenosine synthase [Bifidobacterium bifidum
           PRL2010]
          Length = 479

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 78/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 181 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRRCVDEGAKEVTLLGQNVNSFGYGIG-- 235

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L        +          +P++   +      +    ++++ + +QS
Sbjct: 236 ---DRYAFSKLLRACGDIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHMPLQS 290

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   +E  +      
Sbjct: 291 GSDKILRAMRRSYRSAKFLDILRKVREAMPDAQISTDIIVGFPGETDEDFEATMDVVRQA 350

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  ++ +   GT   +M       +    + +      +T+   +       E+
Sbjct: 351 RFQSAFTFEYSPRPGTPAAEMEQVPHEVVQERFDRLVKLQEQITEEELAKFEGRDVEV 408


>gi|224283403|ref|ZP_03646725.1| hypothetical protein BbifN4_06194 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 479

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 78/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 181 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRRCVDEGAKEVTLLGQNVNSFGYGIG-- 235

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L        +          +P++   +      +    ++++ + +QS
Sbjct: 236 ---DRYAFSKLLRACGDIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHMPLQS 290

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   +E  +      
Sbjct: 291 GSDKILRAMRRSYRSAKFLDILRKVREAMPDAQISTDIIVGFPGETDEDFEATMDVVRQA 350

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  ++ +   GT   +M       +    + +      +T+   +       E+
Sbjct: 351 RFQSAFTFEYSPRPGTPAAEMEQVPHEVVQERFDRLVKLQEQITEEELAKFEGRDVEV 408


>gi|197106915|ref|YP_002132292.1| 2-methylthioadenine synthetase [Phenylobacterium zucineum HLK1]
 gi|229890591|sp|B4RC70|MIAB_PHEZH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|196480335|gb|ACG79863.1| 2-methylthioadenine synthetase [Phenylobacterium zucineum HLK1]
          Length = 450

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P  ++ +    + +    +  + L VQ+  ++ LR + R H A   +  I   R  
Sbjct: 244 TTSHPRDMDDDLIAAHAEVPELMPYLHLPVQAGSDRILRAMNRAHTAESYLRVIEKVRVA 303

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            P ++   D I   P +    +E  LQ            ++ +   GT    + 
Sbjct: 304 RPDIAISGDFIVGFPGEREADFEATLQLVREVGYASCFSFKYSRRPGTPAAALP 357


>gi|182626114|ref|ZP_02953875.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
 gi|177908635|gb|EDT71156.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
          Length = 559

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 25/203 (12%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R          + L       +    DLI  LP + +  ++       +   
Sbjct: 287 NEVLHNINRYITYENIKEKV-LKVAAGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRP 345

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
           D + L  L + KG+   +  +  
Sbjct: 346 DEIQLGFLKLLKGSSMREEAEKW 368


>gi|167379627|ref|XP_001735214.1| radical sam proteins [Entamoeba dispar SAW760]
 gi|165902883|gb|EDR28592.1| radical sam proteins, putative [Entamoeba dispar SAW760]
          Length = 438

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C YC          S+     V + ++ I   + E++   +  G      +     
Sbjct: 155 CENACSYCKTKHARGGLRSYPIEDLVKRVQHSIDEGVKEIRLTGEDIGAY---GLDINET 211

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P ++  + I  +++G A       N    I+     V +      R      + + +QS
Sbjct: 212 FPHML--ECICEVVEGKAMLRIGMVNPPYIIKYFKEIVNI----LLRPCCFKFLHIPIQS 265

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
                L  + R +   E     +  R   P +S   D+I   P +T    +  L+    +
Sbjct: 266 GSSSVLEAMKRKYTREEFDDVCNRLRISVPGISIATDIICGFPTETDEDHKKTLECIQKH 325

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
               +++ Q+ I  GT   KM
Sbjct: 326 QFPIVNISQMYIRPGTPAAKM 346


>gi|50913687|ref|YP_059659.1| Fe-S oxidoreductase [Streptococcus pyogenes MGAS10394]
 gi|71902970|ref|YP_279773.1| Fe-S oxidoreductase [Streptococcus pyogenes MGAS6180]
 gi|94987945|ref|YP_596046.1| radical SAM superfamily protein [Streptococcus pyogenes MGAS9429]
 gi|94991829|ref|YP_599928.1| radical SAM superfamily protein [Streptococcus pyogenes MGAS2096]
 gi|50902761|gb|AAT86476.1| Fe-S oxidoreductase [Streptococcus pyogenes MGAS10394]
 gi|71802065|gb|AAX71418.1| Fe-S oxidoreductase [Streptococcus pyogenes MGAS6180]
 gi|94541453|gb|ABF31502.1| radical SAM superfamily protein [Streptococcus pyogenes MGAS9429]
 gi|94545337|gb|ABF35384.1| Radical SAM superfamily protein [Streptococcus pyogenes MGAS2096]
          Length = 312

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 49  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNT---HDTVDV 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 106 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 166 NRAHSYDLYKETVRRLRHY-PNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 224

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 225 LLHLMTNTRMQRDYHEGRLKL 245


>gi|268325056|emb|CBH38644.1| conserved hypothetical protein, UPF0004 family, radical SAM
           superfamily, TRAM family [uncultured archaeon]
          Length = 430

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 37/210 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF------------IQSFLTEMQWMRQLTGPRSISSIF 75
           C+ KC YC     V++ +   +++            ++S   E++   Q +      S  
Sbjct: 132 CIGKCTYC----IVKQARGKLKSYKPEKICEAVKSAVESGANEIRITSQDSSAYGWGSTD 187

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----V 130
                P+L+  + I  +         +          NP ++         +A       
Sbjct: 188 IK--LPALL--EQITSVEGDFRIRVGM---------MNPFTLMP-ILDELLEAFNTEKIF 233

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWE 188
               + VQS  ++ LR + RN+  ++ +  +   R  F    +S D I   P +T   + 
Sbjct: 234 KFFHVPVQSGSDRVLREMRRNYKVADFVEIVTNIRARFRQSTISTDFIIGFPTETEEDFF 293

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             L        + +++ + +    T   K+
Sbjct: 294 ASLYLLEEIKPEKVNITRFSPRPRTEASKL 323


>gi|253584289|ref|ZP_04861487.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
 gi|251834861|gb|EES63424.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           varium ATCC 27725]
          Length = 295

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 72/202 (35%), Gaps = 10/202 (4%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +CD     + +       I+    E+ + R+         +  G     ++  
Sbjct: 31  CSHNKCTFCDMYKRKKFFIKP----IEQIKREIDFFRKNVKYAERIFLADGDAM--IMPT 84

Query: 87  QNIALILDGIAKNWTVSSNVE-ITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  IL  I + +     +       +         +  R+ G++ + +G++S +++ L
Sbjct: 85  EKLLEILAYIKEVFPECKRISSYATHKSIELKTDEELKKIRENGISLLYIGLESGDDKVL 144

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDHLS 203
             + +  + +E  A    A+     +S   I  +  +           +       D++ 
Sbjct: 145 EKINKGVSVAEHAALCKKAKKAGFSLSVTFIVGVLGKKDWTDHAVNTGKLISEIEPDYVG 204

Query: 204 LYQLTIEKGTLFYKMHKDGDLV 225
           +  L +++GT  Y  +  G+  
Sbjct: 205 ILTLRLKEGTKMYDEYLRGEFQ 226


>gi|170728836|ref|YP_001762862.1| radical SAM domain-containing protein [Shewanella woodyi ATCC
           51908]
 gi|169814183|gb|ACA88767.1| Radical SAM domain protein [Shewanella woodyi ATCC 51908]
          Length = 293

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 87/242 (35%), Gaps = 18/242 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +CD   +    K  +   +   L +++ +      ++I+ +F   G    +  + + 
Sbjct: 29  KCTFCD--MYTAPQKRFRAQKLDKILEDIKVVAN--TGQNITRVFLADGDAMSLPFERLE 84

Query: 91  LILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            I   I ++   V+      +  N  +         R+ G++ + +G +S +++ L  + 
Sbjct: 85  AICLLIQEHLPSVTRISSYCLPRNLKNKTSEQLTRLRELGLSLLYIGCESGDDEVLNRIE 144

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQL 207
           +    + ++ A+   +    + S  ++  L     +        +   +   ++LS   +
Sbjct: 145 KGETYASSLTALLKIKAAGIKSSVMILNGLGGSGLSEQHAINSARLMNAAQPEYLSTLVV 204

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T+  GT       DG   LP+     +L+    ++     L              S H  
Sbjct: 205 TLPLGTERMDSAFDGHFSLPN---QAELFKEMHTLLGHLELE--------RTIFRSDHAS 253

Query: 268 NY 269
           NY
Sbjct: 254 NY 255


>gi|297584652|ref|YP_003700432.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
           MLS10]
 gi|297143109|gb|ADH99866.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
           MLS10]
          Length = 441

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  L++   + +      + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRKPEDVLSQANQLVEAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +     +   ++   VN + + +QS  +  L
Sbjct: 210 NLAGLLRDLETIEGLRRIRISSIEAS--QITDEVIEVINRSDKVVNHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  S     +   +       ++ D+I   P +T  ++E   Q         L 
Sbjct: 268 KRMRRKYTTSFYRERVERLKEALPGLAVTSDVIVGFPGETDEEFEETYQLIRDIGYSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M +  D
Sbjct: 328 VFPFSKRTGTPAARMDEQVD 347


>gi|154249651|ref|YP_001410476.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1]
 gi|154153587|gb|ABS60819.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1]
          Length = 421

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 43/112 (38%), Gaps = 4/112 (3%)

Query: 111 EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARN 166
             NP  ++        +     N + + +QS     L+ +GRN+ A   +  +    A +
Sbjct: 217 SINPEDLDDELINIILENDKICNHLHIPIQSGSTSVLKRMGRNYTADYLLGLVEKLRAAD 276

Query: 167 IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
               ++ D++   P ++  +++  +          +  ++ +   GT   +M
Sbjct: 277 PLFSITTDIMVGFPGESEQEFQETIDLVSKLEFSKVHAFRFSERPGTRAAQM 328


>gi|298383745|ref|ZP_06993306.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
 gi|298263349|gb|EFI06212.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
          Length = 443

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   + S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTVASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSRSRRFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 KLMRRRYDTALFASKVKKIKEVMPDAFVGVDVIVGTRGETEEYFEQAYQFISGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|271963754|ref|YP_003337950.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Streptosporangium roseum
           DSM 43021]
 gi|270506929|gb|ACZ85207.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Streptosporangium roseum
           DSM 43021]
          Length = 502

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P++   +      +    ++++ + +QS  ++ L+ + R++ A   +  I   R  
Sbjct: 244 TSPHPAAFTDDVIAAMAETPNVMHQLHMPLQSGSDRILKAMRRSYRAERYLGIIERVRAA 303

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   +S D+I   P +T   ++  L         +   +Q +I  GT    M
Sbjct: 304 MPDAAISTDIIVGFPGETEEDFQGTLDVVRESRFANAFTFQYSIRPGTPAATM 356


>gi|206890255|ref|YP_002248876.1| hypothetical protein THEYE_A1048 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742193|gb|ACI21250.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 407

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 9/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLIEP 86
           C + C YC         +  +   I+  + E++  + +      +S I  G         
Sbjct: 127 CNQYCSYC---IVPYLRRKPRSYKIEQIMKEIKDYQSIGIKEVVLSGINIGLYGIDYENK 183

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSL 145
            ++  +L  I K  +       +IE N   ++    +      +   + + +Q   ++ L
Sbjct: 184 ISLNKLLKAILKETSGFRIRLSSIEIN--HIDQEFLEIISDNRICKHLHIPLQHGSDRIL 241

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R ++A +    I     ++P +S   D++   P +T   ++  LQ        +L 
Sbjct: 242 GLMNRRYDAFQFSQIIEKIFKLYPDISIGTDVMVGFPSETEDDFKRTLQLIEKIGFSYLH 301

Query: 204 LYQLTIEKGTLFYKM 218
           ++  +    T   +M
Sbjct: 302 VFPYSKRPFTKASEM 316


>gi|110598860|ref|ZP_01387113.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110339521|gb|EAT58043.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 433

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C + C +C            +  +I     ++     L     +  +       SL   +
Sbjct: 146 CNRACSFCSIPKI-------RGRYISQPPEQLLREAALLKSAGVRELNVIAQDISLYGYD 198

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQ 143
            +  +L+ D + +   +  +      A P    +        R    N + + +Q   ++
Sbjct: 199 LEGKSLLNDLVLRLSDMEFDWIRLFYAYPVGFPLEVIDTMHERANICNYLDIPLQHGNDR 258

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R  N +E I  I   R   P +     +I   P +T  ++E  LQ       D 
Sbjct: 259 ILRSMNRGINKAETIKLIETIREKNPDIRLRTTMIAGYPGETREEFEELLQFVEESRFDR 318

Query: 202 LSLYQLTIEKGTLFYKM 218
           L  +    E+    +K+
Sbjct: 319 LGCFPYCHEEHAPSFKL 335


>gi|225419860|ref|ZP_03762163.1| hypothetical protein CLOSTASPAR_06201 [Clostridium asparagiforme
           DSM 15981]
 gi|225041484|gb|EEG51730.1| hypothetical protein CLOSTASPAR_06201 [Clostridium asparagiforme
           DSM 15981]
          Length = 596

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     ++    +   K   G+ ++ +GVQS   ++LR + R  +  E         
Sbjct: 278 FHFEIAADLLDEEAMELLEKMRPGLVQLEIGVQSTNPETLREIHRRTDIGEIRRITARIN 337

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM---HKD 221
           +        DLI  LP + +  +            + L L  L + KG+   +M   +  
Sbjct: 338 SWHNIHQHLDLIAGLPWEGIESFRTSFNEVYGMEPEQLQLGFLKVLKGSHMAEMAESYGL 397

Query: 222 GDLVLPSENVAVDLYNLTQSITS 244
                P   V    +   + +  
Sbjct: 398 VYSRRPPYEVLSTRWLCYEELLE 420


>gi|170028512|ref|XP_001842139.1| aq_284 [Culex quinquefasciatus]
 gi|167876261|gb|EDS39644.1| aq_284 [Culex quinquefasciatus]
          Length = 555

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 74/237 (31%), Gaps = 36/237 (15%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------- 74
            P    C+  C YC       + K  + + I   + E+           +  I       
Sbjct: 211 IPINSGCLNTCTYC-------KTKFARADLISYPVEEIIERATQVFQEGVCEIWLTSEDT 263

Query: 75  -FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK------ 127
             +G    S + P+ +  +++ I  N  +   +      NP  + + +     K      
Sbjct: 264 GTYGRDIGSSL-PELLWKLVEVIPDNCRLRLGM-----TNPPYI-LEHLDEMAKILAHPK 316

Query: 128 -AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTM 184
             G   + + VQS  +  L  + R +  ++        +   P ++   D+I   P +T 
Sbjct: 317 VYGF--LHVPVQSGSDSVLGEMKREYCRADFERICDFLKQKVPGITIATDIICGFPTETE 374

Query: 185 TQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             +E  +     Y    L + Q     GT   KM +     + +    +        
Sbjct: 375 ADFEHTMSLCAKYEFPSLFINQFYPRPGTPAAKMQRIPPDQVKTRTKRLTDLFYGYE 431


>gi|302799254|ref|XP_002981386.1| hypothetical protein SELMODRAFT_52269 [Selaginella moellendorffii]
 gi|300150926|gb|EFJ17574.1| hypothetical protein SELMODRAFT_52269 [Selaginella moellendorffii]
          Length = 421

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 19/198 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL----TGPRSISSIFFGGGTPSLIEPQ 87
           C YC    H R +    +  I++ +  +Q +           S  +  +G    +     
Sbjct: 147 CTYCK-TKHARGHLGSYK--IEALVKRLQGVVSEGVTEIWLSSEDTGAYGRDIGT----- 198

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVE---VNNFQGYRKAGV-NRISLGVQSLEE 142
           +I  +L  +        +V + I   NP  +        +  R   V + + + VQS  +
Sbjct: 199 DIPTLLHALVAELPRDRSVMLRIGMTNPPYILQHLKEIAEILRHPCVYSFLHVPVQSGSD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R +  +E          + P +    D+I   P +T  +++  ++    Y   
Sbjct: 259 SVLAAMKREYTVAEFKQVADTLIELVPDIHIATDIICGFPGETSDEFDKTMELIEHYKFP 318

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + + Q     GT   +M
Sbjct: 319 QVHISQFYPRPGTPAARM 336


>gi|253584036|ref|ZP_04861234.1| Fe-hydrogenase assembly protein [Fusobacterium varium ATCC 27725]
 gi|251834608|gb|EES63171.1| Fe-hydrogenase assembly protein [Fusobacterium varium ATCC 27725]
          Length = 361

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 26/228 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT----GPRSISSIFFGGGTPSL 83
           C+K C YC     +R+     E F  S    M+ ++ +     G  ++ S        + 
Sbjct: 60  CIKNCNYCG----IRKGNSKVERFSMSKDEVMKGVKWIYENNYGSLALQSGERQDKEFTD 115

Query: 84  IEPQNIALILDGIAKNWTVS-SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                I  I         ++ S  E + E      +          G +R  L ++S  +
Sbjct: 116 FVEDIIKEIKKLSNGRLGITLSLGEQSFETYKRWFDA---------GAHRYLLRIESTNK 166

Query: 143 QSLRFLG---RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  + L      H        +   R I  ++   ++  +P QT      ++       +
Sbjct: 167 ELFQRLHPQDGKHTFEVRKKCLEYLREIGYQVGTGVMIGVPGQTEEDLVDDILFYRDMKI 226

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLP---SENVAVDLYNLTQSITS 244
           D + +    I K T   +  +  D+VLP      + + +  LT+    
Sbjct: 227 DMIGMGPYIIHKDTPLGQ--EWKDIVLPSEKRVELGLKMIALTRIFLK 272


>gi|167770806|ref|ZP_02442859.1| hypothetical protein ANACOL_02157 [Anaerotruncus colihominis DSM
           17241]
 gi|167666846|gb|EDS10976.1| hypothetical protein ANACOL_02157 [Anaerotruncus colihominis DSM
           17241]
          Length = 479

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 74/221 (33%), Gaps = 8/221 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +          +   + + + E++++ +      I  IF    T +     
Sbjct: 209 CPYRCNFCSYP-ETMGGHQLRRRSVSNLVDELEYIHKQMP--EIREIFIEDDTFT----A 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +++   +       +  +     + +     +  ++AG   + +G +S  +  L  
Sbjct: 262 DKKRVMEVCDEILRRGLKLRWSCNTR-ADLPYAVMKKMKEAGCRLLVVGFESGNQGVLDQ 320

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     ++ A     + +  ++    +  L   ++   E   Q A S   D +   Q 
Sbjct: 321 TKKGIKLEQSRAFAENTKKLKIKVFGCFMIGLTGDSLETIEETFQFAKSIYPDMVFFQQA 380

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
               GT FYK  K+   ++  +       +   +    +  
Sbjct: 381 VPFPGTGFYKWAKENGYLITEDYSKWLNSDGYLNCLVNYPY 421


>gi|288930027|ref|ZP_06423868.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288328686|gb|EFC67276.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 456

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C    F       K      + + L E+  +      R +  +       S  
Sbjct: 174 CPHHCDFCYKDAFY---EGGKFFYTARVDAALKEIDAL----PGRHLYFLD-DHLLGSKR 225

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +   + G+ + +  ++ V+  +E        +  +   +AG+  + +G ++   ++
Sbjct: 226 FAAELFEGMKGMNRVFQSAATVQSILEG-------DLIEKAAEAGMRSVFIGFETFSPEN 278

Query: 145 LRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+   +  N      AA+    ++   ++   ++ L       +   +   +  A+   +
Sbjct: 279 LKASNKCQNLQRDYSAAVQRLHSLGIMINGSFVFGLDHDDADVFRRTVDWGVDNAITTAT 338

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSE 229
            + LT   GT  ++  +    +L  +
Sbjct: 339 YHILTPYPGTRQFQRMETEGRILTYD 364


>gi|160933848|ref|ZP_02081236.1| hypothetical protein CLOLEP_02710 [Clostridium leptum DSM 753]
 gi|156867725|gb|EDO61097.1| hypothetical protein CLOLEP_02710 [Clostridium leptum DSM 753]
          Length = 317

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 18/194 (9%)

Query: 28  CVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C +KC YC  N     + RY++  +  + +            G R++  +   G  P   
Sbjct: 46  CRRKCVYCGLNCRNQALHRYRMTPDEIVDAASAA-----ARAGYRTL--VMQSGEDP-WF 97

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P+ +  ++  I K         + +  +   +    +   R+ G +R  L  ++ + + 
Sbjct: 98  TPKILGGLVKEIKK-------TGMAVTLSCGEMPEEAYAYLRECGADRYLLKHETADPEI 150

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L  + +    IA + + + +        +  LP QT      +L        D   +
Sbjct: 151 YSALHPDSSLQRRIACLKVLKRLGYETGSGFMIGLPGQTAETLADDLLLLQEIGCDMAGM 210

Query: 205 YQLTIEKGTLFYKM 218
                   T   ++
Sbjct: 211 GPFIPHPDTPLREL 224


>gi|189425324|ref|YP_001952501.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421583|gb|ACD95981.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 293

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 76/230 (33%), Gaps = 15/230 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C      + +    E  +             T    +  +F   G   +   + +  
Sbjct: 31  CRFCGMYKGKQFHLRPVEEILAEITE-----LPSTYRTRVERVFLADGDALVYPFEGLVT 85

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           ILD +A   T      I   A+P+S+    V   Q  R+  +  +  G++S ++++L+ +
Sbjct: 86  ILDALAS--TFPGLTRIGSYASPNSLTTKTVEQLQLLREKKLRILYFGLESGDDETLQQI 143

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLSLYQ 206
            +  +++       +AR    ++S   I  L  +T  +               +  SL  
Sbjct: 144 NKGFDSNRMAELALMARQAGMKLSVTAILGLAGRTRSLEHARATAAWVNRVNPEFFSLLT 203

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           L       F +  +  +           L +L    T     H   +SN 
Sbjct: 204 LFHRHNEPFVRSLEQCNHRELLLEARELLCHLAPQRTILRSNH---VSNF 250


>gi|321312027|ref|YP_004204314.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           BSn5]
 gi|320018301|gb|ADV93287.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           BSn5]
          Length = 451

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 71/230 (30%), Gaps = 10/230 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L  +         + I+     S +     +   ++   VN + + +QS     L
Sbjct: 210 NFAKLLSELDTRVEGVKRIRIS-SIEASQITDKVIEVLDRSDKIVNHLHIPIQSGSNTVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        ++  +       ++ D+I   P +T  ++         +    L 
Sbjct: 269 KRMRRKYTMEFFADRLNKLKKALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSELH 328

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D     +N  V          +      YE 
Sbjct: 329 VFPYSKRTGTPAARMEDQVDEN--VKNERVHRLIALSDQLAKEYASQYEN 376


>gi|319440615|ref|ZP_07989771.1| biotin synthase [Corynebacterium variabile DSM 44702]
          Length = 332

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 23/201 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR  K+     I   + + +   +             G   +L
Sbjct: 67  CPEDCHFCSQSGLFESPVRSTKLD----IAQLIEQARQTAKTGASEFCIVAAVKGPDEAL 122

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE-- 141
           +    +   +  I  N        I +  +   +        +  GV+R +  +++    
Sbjct: 123 MS--QLEDAVQQIYANVD-----GIDVAVSVGILTPEQVARLKAVGVHRYNHNLETARSY 175

Query: 142 -EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             + +      H   E    + + ++    +    I  +  +T  Q      +       
Sbjct: 176 FPEVVT----THTWEERRETMLMIKDAGIEVCCGGIIGM-GETPEQRAEFAVQLAELDPH 230

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            + L  L    GT F  M   
Sbjct: 231 EVPLNFLDPRPGTPFGHMEVM 251


>gi|257451722|ref|ZP_05617021.1| hypothetical protein F3_01564 [Fusobacterium sp. 3_1_5R]
 gi|317058281|ref|ZP_07922766.1| radical SAM-superfamily protein [Fusobacterium sp. 3_1_5R]
 gi|313683957|gb|EFS20792.1| radical SAM-superfamily protein [Fusobacterium sp. 3_1_5R]
          Length = 444

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 28/205 (13%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C ++C YC       D  S  +   + +    +   + E+  + Q T    I +      
Sbjct: 154 CNRRCTYCIIPQLRGDLRSRTKEDILEEAKRLVSGGVRELNLLAQETTEYGIDNYG-KKA 212

Query: 80  TPSLIEPQNIALI--LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISL 135
            P L+  + +  I  LD I   +             P S+     +  +  +       +
Sbjct: 213 LPDLL--RELVKIEGLDWIRTYYMF-----------PRSITDELIEVMKQEEKICKYFDI 259

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q +    LR +GR     +    ++  R   P   F   LI   P +T  +++     
Sbjct: 260 PIQHISSNMLRRMGRAITGEQTKELLYKIRKEIPEAVFRTSLIVGFPGETEEEFQELKDF 319

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
              +  D++ ++Q + E+ T+ Y M
Sbjct: 320 VEEFQFDYIGVFQYSREEDTVAYTM 344


>gi|189499975|ref|YP_001959445.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495416|gb|ACE03964.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1]
          Length = 467

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 82/234 (35%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  I+  L EM++ ++  G +++S  F         +P+
Sbjct: 205 CPVGCNFCTTPTIYGKSHRMRE--IELVLDEMRYHQERVGKKNVSFSFMDDNI--SFKPK 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ +A N  V  N  I++    + +          ++G + +S+G +SL  ++L+
Sbjct: 261 FFTDLLEEMA-NIGVRWNANISM----NFLHKPEIAELAGRSGCDLMSIGFESLNPETLK 315

Query: 147 FLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N        +         +    ++     +   +++     +   ++     
Sbjct: 316 SVHKGSNRLGNYETVVSNLHKNGVAIQGYFMFGFDNDSEESFQLTYDFIMDNQIEFPVFS 375

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
            +T   GT ++   K     L  +      Y         + +         E+
Sbjct: 376 LVTPFPGTPYFDEMKSRVRHLDWDKYDTYHYMFEPTNMSGEKLLENFVKLQREV 429


>gi|78186125|ref|YP_374168.1| hypothetical protein Plut_0237 [Chlorobium luteolum DSM 273]
 gi|123743738|sp|Q3B6A6|MIAB_PELLD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78166027|gb|ABB23125.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium luteolum DSM
           273]
          Length = 446

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 14/248 (5%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C +C     V   +  + +   + +T         G R I+ +  G    
Sbjct: 151 IPVMRGCNNMCAFC----VVPFTRGRERSQPLAMVTGEARELAEAGYREITLL--GQNVN 204

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S  +P + A     +      + +V I     +P  + V       +       + L VQ
Sbjct: 205 SYSDPASGATFSALLDAVALAAPDVRIRFTTSHPKDISVGLIDTIARRPNICRHVHLPVQ 264

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  +  LR + R H  SE +  I + R+      +S D+I     +        L    +
Sbjct: 265 SGSDSVLRRMNRGHGISEYLEKIRIIRDALPGVTLSTDIIAGFCGEREEDHRATLDLLRT 324

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              D   ++  +  +GTL  +   D       +    ++ +L Q I++ +          
Sbjct: 325 VRFDAAFMFHYSTREGTLAARTLPDDVAETDKKRRLQEIIDLQQEISAENNRRQVGTVAE 384

Query: 257 SFLGAESL 264
               +ES 
Sbjct: 385 VLAESESR 392


>gi|313205436|ref|YP_004044093.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paludibacter
           propionicigenes WB4]
 gi|312444752|gb|ADQ81108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paludibacter
           propionicigenes WB4]
          Length = 456

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 29/231 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   ++S LTE++ ++                  +L+   
Sbjct: 172 CNNFCSYC---IVPYTRGRERSRDVESILTELKDLQAKNYKEV-----------TLLGQN 217

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-----------NPSSVEVNNFQGYRKAG--VNRIS 134
             +  ++   +       + I  EA           +P  +     +   +       I 
Sbjct: 218 VNSYRMEKDGEVIEFPDLLAIVAEAAPEMRFRFSTSHPKDMSDRTLEVIAQYPNLCKSIH 277

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQ 192
           L VQS   + L+ + R +     +  I   R I P   +S D+      +T    +  L 
Sbjct: 278 LPVQSGSNKILKLMNRKYTREWYLERIAAIRRILPEASISTDVFCGFHGETEEDHQETLS 337

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  D   +++ +   GT   K   D            ++ +L + +T
Sbjct: 338 LLREVNFDLAFMFKYSERPGTFAAKNLPDNISEEEKLRRLAEIIDLQRELT 388


>gi|257467023|ref|ZP_05631334.1| hypothetical protein FgonA2_06247 [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315918160|ref|ZP_07914400.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313692035|gb|EFS28870.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 444

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 28/205 (13%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C ++C YC       D  S  +   + +    +   + E+  + Q T    I +      
Sbjct: 154 CNRRCTYCIIPQLRGDLRSRTKEDILEEAKRLVSGGVRELNLLAQETTEYGIDNYG-KKA 212

Query: 80  TPSLIEPQNIALI--LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISL 135
            P L+  + +  I  LD I   +             P S+     +  +  +       +
Sbjct: 213 LPDLL--RELVKIEGLDWIRTYYMF-----------PRSITDELIEVMKQEEKICKYFDI 259

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +Q +    LR +GR     +    ++  R   P   F   LI   P +T  +++     
Sbjct: 260 PIQHISSNMLRRMGRAITGEQTKELLYKIRKEIPEAVFRTSLIVGFPGETEEEFQELKDF 319

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
              +  D++ ++Q + E+ T+ Y M
Sbjct: 320 VEEFQFDYIGVFQYSREEDTVAYTM 344


>gi|126730999|ref|ZP_01746808.1| MiaB-like tRNA modifying enzyme [Sagittula stellata E-37]
 gi|126708715|gb|EBA07772.1| MiaB-like tRNA modifying enzyme [Sagittula stellata E-37]
          Length = 421

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 22/207 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ + Q      + +      +G   P
Sbjct: 148 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVQEGYNEVVLTGVDLTSWGADLP 202

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                     + D + +   ++    + I   +    +    Q        +  + L +Q
Sbjct: 203 ------GEPRLGDLVLRILRLTDVPRLRISSIDSIEADDALMQAIATEPRLMPHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              +  L+ + R H   +AI     AR + P M+F  D+I   P +T   ++  L+    
Sbjct: 257 HGHDLILKRMKRRHLRDDAIRFCEEARALRPDMTFGADIIAGFPTETDEHFDASLRLVED 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +  L ++  +   GT   K+    D
Sbjct: 317 CGLTWLHVFPYSARPGTPAAKIPNRVD 343


>gi|322806960|emb|CBZ04530.1| fe-S oxidoreductase [Clostridium botulinum H04402 065]
          Length = 561

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 6/149 (4%)

Query: 101 TVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAI 158
            + ++     E +   +     +   K    RI    GVQ+   + L+ + R+ N     
Sbjct: 244 NLDTDATFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVLKNINRHVNFQTIK 303

Query: 159 AAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF-- 215
             +   +N+   +   DLI  LP +    ++       S   + + L  L + KG+    
Sbjct: 304 EKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSSMRL 363

Query: 216 -YKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             +         P   +        + + 
Sbjct: 364 EAEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|315645963|ref|ZP_07899084.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex
           V453]
 gi|315278724|gb|EFU42038.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex
           V453]
          Length = 447

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 68/200 (34%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + +   +        + +    GG    +E  
Sbjct: 153 CNNFCTFC---IIPWSRGLSRSRDPKSIIQQAHQLVGAGYKEIVLTGIHTGGYGDDLEEY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            ++ +L  + +   +      +IEA+   ++        ++      + + +Q+ ++  L
Sbjct: 210 RLSDLLWDLDRVDGLERIRISSIEAS--QIDEKMLDVLNRSTKMCRHLHIPLQAGDDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    + L R   P +    D+I   P +T   +        +     + 
Sbjct: 268 KRMRRKYTTEEFYNKMGLIRQAMPDVGITTDVIVGFPGETDEMFRNGYDLMKAIQFSEMH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSKRTGTPAARMEDQVD 347


>gi|310825320|ref|YP_003957678.1| sam domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398392|gb|ADO75851.1| SAM domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 485

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 67/198 (33%), Gaps = 13/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C  +C +C       +++        +     +   ++       +       P   +  
Sbjct: 247 CPYRCTFC-------QHRESGARLRNTRFPMQRLREEIALFARAGTQEIDVLDPIFNLGQ 299

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + + ++ + + +         I+++     ++    +   +  V     G+Q++  +  R
Sbjct: 300 EPLLVLEELVRQRI----QARISLQCRFELLKPEFLELCTQLNV-FPEFGLQTIHTEEGR 354

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R ++ +    A+             LIY LP QT+  +   ++  L   V  +  + 
Sbjct: 355 LVQRQNDMTRVETAMGELARRGIAYMVTLIYGLPGQTLESFHATVEFCLKRGVHVVRAFP 414

Query: 207 LTIEKGTLFYKMHKDGDL 224
           L + +GT   +      L
Sbjct: 415 LNLLRGTELERDKARWGL 432


>gi|115373518|ref|ZP_01460815.1| radical SAM domain protein, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369524|gb|EAU68462.1| radical SAM domain protein, putative [Stigmatella aurantiaca
           DW4/3-1]
          Length = 441

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 67/198 (33%), Gaps = 13/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C  +C +C       +++        +     +   ++       +       P   +  
Sbjct: 203 CPYRCTFC-------QHRESGARLRNTRFPMQRLREEIALFARAGTQEIDVLDPIFNLGQ 255

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + + ++ + + +         I+++     ++    +   +  V     G+Q++  +  R
Sbjct: 256 EPLLVLEELVRQRI----QARISLQCRFELLKPEFLELCTQLNV-FPEFGLQTIHTEEGR 310

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R ++ +    A+             LIY LP QT+  +   ++  L   V  +  + 
Sbjct: 311 LVQRQNDMTRVETAMGELARRGIAYMVTLIYGLPGQTLESFHATVEFCLKRGVHVVRAFP 370

Query: 207 LTIEKGTLFYKMHKDGDL 224
           L + +GT   +      L
Sbjct: 371 LNLLRGTELERDKARWGL 388


>gi|78221818|ref|YP_383565.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78193073|gb|ABB30840.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 501

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 88/262 (33%), Gaps = 26/262 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +   +  +    ++F+ E++ +  + G   +         P+  + +
Sbjct: 205 CKSQCSFCS--QQLFWAQSWRARSAENFVAELEMLHNVHG---VQVAMLSDELPTF-DRE 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +       V++ +E     +  + +    YR+ GV  I +GV++  +++L
Sbjct: 259 RWVRILDLMVEREV---PVKLLMETRVDDILRDADIMDKYREGGVEHIYVGVEAGSQETL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               ++   +++  AI L            +  +P  T    E  ++ A  Y  D     
Sbjct: 316 DLFKKDTEVAQSKQAIDLINGADIVSETSFVLGMPDDTPESIEQTIELAKHYNPDMAFFL 375

Query: 206 QLTIEKGTLFY---------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            +        Y         K ++  +LV P            +                
Sbjct: 376 AIAPWPYAELYPELEPYVATKDYRKYNLVEPVIKPKNMTMEELERQLGKASQK------F 429

Query: 257 SFLGAESLHNLNYWRYGDYIGI 278
                ++L  L+ W+    + +
Sbjct: 430 FMHKFQNLDKLSPWKQEFMLSV 451


>gi|322420962|ref|YP_004200185.1| cobalamin B12-binding domain-containing protein [Geobacter sp. M18]
 gi|320127349|gb|ADW14909.1| cobalamin B12-binding domain protein [Geobacter sp. M18]
          Length = 557

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQ 143
              I   +    +            E     +   N     +  AGV R  +GVQS  ++
Sbjct: 239 ADEIWRFILEHNRGSKF------HFEIAAELLTEENLAQLSQVPAGVFRFEIGVQSGGQE 292

Query: 144 SLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + RN + S     +   ++     +  DL+  LP +++  +   +Q   +   DH+
Sbjct: 293 TLAKVERNSSLSRLYHNVERLKSATGVTVHLDLVAGLPGESLEGFLDSVQGLFALNADHI 352

Query: 203 SLYQLTIEKGTLFY 216
            +  L + KGT   
Sbjct: 353 QVEPLKVLKGTAMR 366


>gi|152992605|ref|YP_001358326.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
 gi|151424466|dbj|BAF71969.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
          Length = 417

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 63/189 (33%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC            + +  ++ L +++ +        I +   G    S     
Sbjct: 146 CDFRCSYC---IIPAVRGNARSHREETILEQIRKLAANGFGEFILT---GTNVGSYGRDH 199

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK-AGVNRISLGVQSLEEQS 144
           +  +A +L  ++    V      ++E  P  ++    +   +      + + +Q   ++ 
Sbjct: 200 DTSMAKLLKKMSMIRGVRRIRIGSLE--PVQIDDEFMELLSEPWMAKHLHIALQHTSDRM 257

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R +  +  +   H        +  D I   P +   +W+  + R     + H+  
Sbjct: 258 LELMNRRNRFATDLELFHRIAEKGYALGTDYIVGHPGEDEKEWKEGISRVKELPLTHVHA 317

Query: 205 YQLTIEKGT 213
           +  +    T
Sbjct: 318 FSYSKRDNT 326


>gi|317485886|ref|ZP_07944746.1| MiaB-like tRNA modifying enzyme YliG [Bilophila wadsworthia 3_1_6]
 gi|316922860|gb|EFV44086.1| MiaB-like tRNA modifying enzyme YliG [Bilophila wadsworthia 3_1_6]
          Length = 433

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C   N         ++  ++     +    +     +     +G     L   
Sbjct: 148 CRHACSFCAIPNIRGGHRSHCKDMIVREARALLDQGVKELNLVAQDLTEWGCD---LNGK 204

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQ 143
           Q++  +LDG+     +     + +   P+ +     +  R+AG   V    + VQ     
Sbjct: 205 QDLRTLLDGLLPLQGLERLRLMYL--YPAGMTHEMLKYLREAGKPFVPYFDVPVQHSHPD 262

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  +GR   A     AI   RN+FP  +    ++   P +T   +E   +        H
Sbjct: 263 VLSRMGRPF-ARNPREAIDRIRNVFPEAALRTSIMVGFPGETEEHFEHLREFIEEVRFQH 321

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           L ++    E+GT    M    +
Sbjct: 322 LGVFAYRAEEGTPAAAMPDQVE 343


>gi|313887037|ref|ZP_07820737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923563|gb|EFR34372.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 450

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 19/227 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +  Y  G+E      S + E+Q M Q  G R ++ +  G    S   
Sbjct: 164 CDNFCTYC-----IVPYTRGRERSRDPESIVREVQRMAQ-EGYREVTLL--GQNVNSYCW 215

Query: 86  PQNI---ALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                      D + K       + I     +P  ++    +           I   +QS
Sbjct: 216 QSETGVSYTFADLLRKVAEAVPTMRIRFTSPHPKDMKDETLEVMSLYPNICRHIHFPLQS 275

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L  + R +     +  +   R+  P   +S D+      +T   ++  L+     
Sbjct: 276 GSNRILERMHRRYTREWYLERVERIRDYMPDCGLSTDVFCGFSGETEEDFQETLEVMRQA 335

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +D   +++ +   GT     H   D+    +   ++     Q+  S
Sbjct: 336 RLDSAFMFKYSERPGTY-ASRHLVDDVPEEVKVERLNRMIALQNELS 381


>gi|302772983|ref|XP_002969909.1| hypothetical protein SELMODRAFT_31574 [Selaginella moellendorffii]
 gi|300162420|gb|EFJ29033.1| hypothetical protein SELMODRAFT_31574 [Selaginella moellendorffii]
          Length = 421

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 19/198 (9%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL----TGPRSISSIFFGGGTPSLIEPQ 87
           C YC    H R +    +  I++ +  +Q +           S  +  +G    S     
Sbjct: 147 CTYCK-TKHARGHLGSYK--IEALVKRLQGVVSEGVTEIWLSSEDTGAYGRDIGS----- 198

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVE---VNNFQGYRKAGV-NRISLGVQSLEE 142
           +I  +L  +        +V + I   NP  +        +  R   V + + + VQS  +
Sbjct: 199 DIPTLLRALVAELPRDRSVMLRIGMTNPPYILQHLKEIAEILRHPCVYSFLHVPVQSGSD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R +  +E          + P +    D+I   P +T  +++  ++    Y   
Sbjct: 259 SVLEAMKREYTVAEFKQVADTLIELVPDIHIATDIICGFPGETSDEFDKTMELIEHYKFP 318

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + + Q     GT   +M
Sbjct: 319 QVHISQFYPRPGTPAARM 336


>gi|256811437|ref|YP_003128806.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
 gi|256794637|gb|ACV25306.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
          Length = 500

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 71/196 (36%), Gaps = 11/196 (5%)

Query: 32  CPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG----TPSLIEP 86
           C +C   S     +   +E+ ++     ++   +     +   + +  G     P     
Sbjct: 216 CGFCSVPSVFGYARSRDEEDILKEVEDLLKEGVKRIVLSAPDFLDYKRGKKLINP-YFPE 274

Query: 87  QNIALILDGIAKNWTVSS--NVEITIEANPSSVEVNNF-QGYRKAGVNRISLGVQSLEEQ 143
            N   I   ++K   ++   N  + IE   +++      + + K     I +G +S +E+
Sbjct: 275 PNYEAIESLLSKCKDLADKYNANVLIENIKANLFNEKVAEIFSKYLKTPIYIGCESGDER 334

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA--VDH 201
             + LGR     + + A+ +A+    +     IY LP +     +  +         +D 
Sbjct: 335 HCKLLGRPTTPEDVLKAVKIAKKYNLKAQVYFIYGLPGENEKVAKNTVNFMHKIKHYIDK 394

Query: 202 LSLYQLTIEKGTLFYK 217
           +++Y+      + F  
Sbjct: 395 ITVYKFRPLPMSAFQN 410


>gi|126730915|ref|ZP_01746724.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sagittula stellata E-37]
 gi|126708631|gb|EBA07688.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sagittula stellata E-37]
          Length = 435

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 13/196 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E    +    M+  R L   R +  I   G   +     
Sbjct: 157 CDKFCAFC-----VVPYTRGAELSRPA-ERVMREARDLVE-RGVREITLLGQNVNAYHGH 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +   I +  T+     I     +P+ ++      + +    +  + L VQ+  ++ 
Sbjct: 210 E-RGLAGLIRELETIDGLARIRFTTSHPNDMDDALIAAHGECEKLMPYLHLPVQAGSDRI 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H A + +  I   R   P   +S D I   P++T   +   L    +      
Sbjct: 269 LKRMNRQHTAEQYLRLIERLRAARPDLHLSGDFIVGFPEETEADFRDTLALIEAVEYGSA 328

Query: 203 SLYQLTIEKGTLFYKM 218
             ++ +   GT   + 
Sbjct: 329 FSFKYSERPGTPAAER 344


>gi|78187264|ref|YP_375307.1| hypothetical protein Plut_1405 [Chlorobium luteolum DSM 273]
 gi|123730034|sp|Q3B317|RIMO_PELLD RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|78167166|gb|ABB24264.1| SSU ribosomal protein S12P methylthiotransferase [Chlorobium
           luteolum DSM 273]
          Length = 440

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 66/198 (33%), Gaps = 13/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C            +  ++   + ++    +L     +  +       ++    
Sbjct: 148 CSRACSFCSIPKI-------RGRYLSQPMEQLLREARLLQENGVKELNLIAQDITVYGVD 200

Query: 88  NI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQ 143
                ++ D + +   +       + A P    +        R    N + L +Q   + 
Sbjct: 201 LYGKQMLNDLLMRLSDMEFRWIRLLYAYPVGFPLEVIDTIGNRSNICNYLDLPLQHCSDP 260

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R     +++  I   RN  P +     +I   P +T  ++E  L+ A S   D 
Sbjct: 261 ILRSMNRGITKEQSLRLIEEIRNRNPDIRLRTTMIAGYPGETRKEFEEMLEFAGSVRFDR 320

Query: 202 LSLYQLTIEKGTLFYKMH 219
           L  +    E+ +  Y + 
Sbjct: 321 LGCFPYRHEEHSPAYSLI 338


>gi|325295204|ref|YP_004281718.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065652|gb|ADY73659.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 437

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 74/199 (37%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS----ISSIFFGGGTPSL 83
           C   C YC     + + +    +  +     ++ +++L         ++    GG    L
Sbjct: 153 CELFCSYC----IIPKARGKMLS--EKPEKVLEQVKELINSGYKEIVLTGTHLGGYGLDL 206

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            E  ++A +++ I K   +      ++E  P        +    +      + + +QS  
Sbjct: 207 EESLSLAKLIEKIVKIPGLYRLRISSVE--PIEFSDELIEVVTSSPKIAPHLHIPLQSGS 264

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R +   +    +    +  P +    D++   P +T   +E   +    +  
Sbjct: 265 DRILNLMKRRYTKRDYKTIVERILSKNPDICIGTDVMVGFPGETEEDFEETKKFIKEFPF 324

Query: 200 DHLSLYQLTIEKGTLFYKM 218
            ++ ++  +  KGT+ YKM
Sbjct: 325 GYIHVFPYSPRKGTVAYKM 343


>gi|322411185|gb|EFY02093.1| Fe-S oxidoreductase [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 313

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVKQYLVYFQNFTNT---HDKVEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E++   +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAELAERMHVTVELGLQTTYEKTSEVI 159

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+       +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 160 NRAHSYDLYKETVKRLRQYPKIEIVSHLINGLPGETHEMMLDNVRRCVTDNDIQGIKLHL 219

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 220 LHLMTNTRMQRDYHEGRLQLLSQEDYVSIICDQLEIIPKHIVIH 263


>gi|221636305|ref|YP_002524181.1| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit
           [Thermomicrobium roseum DSM 5159]
 gi|221157839|gb|ACM06957.1| 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit
           [Thermomicrobium roseum DSM 5159]
          Length = 441

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 71/240 (29%), Gaps = 20/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K+C +C F     R    ++ +       ++  R+       + +    G P  ++P 
Sbjct: 84  CIKRCGFCAF----SRGHREEQGYFLPLEEIVRRARE-AWELGATEVCIQAGLPPKMDPD 138

Query: 88  NIALILDGIA------KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSL 140
               I   I            S    +       +         + AGV  +     + L
Sbjct: 139 LYPTICRAIKAELPEIHIHGFSPEEVVYGALRARTSIEEYLLRLKAAGVGSLPGTSAEIL 198

Query: 141 EEQSLRFL--GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++   + +  GR    ++ +  I  A  +    +  ++Y    +T  Q    L    S  
Sbjct: 199 DDTVRQRISPGRI-TTAQWVEVITTAHRLGIPTTATIMYGHV-ETDRQRAAHLALIRSIQ 256

Query: 199 VDHLSLYQL----TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +     +      +      Y+     DL   +    V   +    I     +   ++S
Sbjct: 257 KETGGFTEFVPLSLVHSEAPMYRKRLLPDLRPGATGEDVVKMHAIARIMLHPYIRNIQVS 316


>gi|218780253|ref|YP_002431571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761637|gb|ACL04103.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfatibacillum
           alkenivorans AK-01]
          Length = 461

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 78/227 (34%), Gaps = 28/227 (12%)

Query: 2   KYLSAYEN------NMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           ++L  +E       +  G   + +  +V     C   C YC    HVR  ++ +++  Q+
Sbjct: 129 EFLDFFEEIKQPHLDKAGPEESGVSAFVTIMSGCDNYCTYCV-VPHVRGREMSRDS--QA 185

Query: 55  FLTEMQWMRQL------TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
            L E++ +            ++++S     G  S      +  ++        +      
Sbjct: 186 ILAEVESLAAKGVKEITLLGQNVNSYGNKEGFGSF---AGLLRLVHEAEGVERIR----- 237

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
              ++P  +     Q + +       I L VQS   + L+ + R +   + +  +   R 
Sbjct: 238 FTTSHPKDLSQELIQAFAELPKLCKHIHLPVQSGSNRILKKMNRGYTREDYLGKVRALRE 297

Query: 167 IFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
             P +    D+I   P +T   ++  +        D L  +  +   
Sbjct: 298 ACPEIRLTTDIIAGFPSETEEDFQDTMDLIRRADYDSLFAFMYSDRP 344


>gi|167771421|ref|ZP_02443474.1| hypothetical protein ANACOL_02787 [Anaerotruncus colihominis DSM
           17241]
 gi|167666061|gb|EDS10191.1| hypothetical protein ANACOL_02787 [Anaerotruncus colihominis DSM
           17241]
          Length = 457

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   ++    +   R L G      +  G    S    +
Sbjct: 174 CDNFCTYC-----IVPYVRGRERS-RNPGDVLNEARALVGQGYRELLLLGQNVNSYGKGL 227

Query: 85  E-PQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P N A +L    +   +  +  I  + ++P                    I L VQS 
Sbjct: 228 SEPINFAALL---RRVNEIEDDFWIRFMTSHPKDCTHELIDTIAACNKVCRHIHLPVQSG 284

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R++  +  +  I  AR   P ++F  D+I   P +T   +E  L+      
Sbjct: 285 SDRILAAMNRHYTVAHYLELIDYARARIPGVTFSSDIIVGFPGETRADFEQTLELIKRVR 344

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            + L  +  +   GT    M
Sbjct: 345 FNALYTFIYSPRPGTKAAGM 364


>gi|121997684|ref|YP_001002471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila
           SL1]
 gi|229890553|sp|A1WVF7|MIAB_HALHL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|121589089|gb|ABM61669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila
           SL1]
          Length = 474

 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQ- 87
           C  YC F              +   L E++ + +  G R ++ +         +L + + 
Sbjct: 175 CSKYCSFCVVPYTRGDEISRPVADVLAEVRSLAEQ-GVREVNLLGQNVNAYAGALDDGER 233

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++ L+++ +A+   +      T  ++P+         YR      + + L VQS  +  
Sbjct: 234 ADLGLLIEAVARIPGIDRIRFTT--SHPAEFHSGLIDAYRDVPELADFLHLPVQSGSDLI 291

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R H+ +   A I    A      ++ DLI   P +T  ++E  L        D  
Sbjct: 292 LKLMKRGHDIAAYEALIDQIRAVRPGLVLATDLIVGFPGETEAEFEETLAMVDRVGFDGG 351

Query: 203 SL-YQLTIEKGTLFYKMH 219
           +  +  +   GT   ++H
Sbjct: 352 AFSFVYSPRPGTPAAELH 369


>gi|307293142|ref|ZP_07572988.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum
           L-1]
 gi|306881208|gb|EFN12424.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum
           L-1]
          Length = 449

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 10/212 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC                  + L E + +    G R I+ +       +  + +
Sbjct: 162 CDKFCTYC---VVPYTRGAEISRGWNAILDEAKALVD-GGVREITLLGQNVNAWTGEDDK 217

Query: 88  NIALILDG-IAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +DG + +   + +   I     +P+ +       +      +  + L VQS  ++
Sbjct: 218 GRTQGMDGLVRELAKIDALKRIRYTTSHPNDMSDGLIAAHGDEPKLMPFLHLPVQSGNDR 277

Query: 144 SLRFLGRNHNASEAIAAIHLA--RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R+H+    +  I           +S D I   P +T  ++E  L+         
Sbjct: 278 ILKAMNRSHSTDSYLRIIERVRECRGDMALSGDFIVGFPGETDAEFEDTLKIVEQVRYAQ 337

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
              ++ +   GT    M       +  E +A 
Sbjct: 338 CYSFKYSPRPGTPAADMDHQIPAEVMGERLAR 369


>gi|266623033|ref|ZP_06115968.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
           13479]
 gi|288865205|gb|EFC97503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
           13479]
          Length = 234

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P  +     +  + +    + + L +QS   + L+ + R +   + +  +   R  
Sbjct: 31  MTSHPKDLSDELIEVMKNSDKICHHLHLPLQSGSSRILKAMNRRYTKEQYLELVEKIRAA 90

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +S   D+I   P +T   +   +        D    +  +   GT    M
Sbjct: 91  VPDISLTTDIIVGFPGETEEDFSETMDVVRRVRFDSAFTFIYSRRTGTPAAAM 143


>gi|212705027|ref|ZP_03313155.1| hypothetical protein DESPIG_03095 [Desulfovibrio piger ATCC 29098]
 gi|212671579|gb|EEB32062.1| hypothetical protein DESPIG_03095 [Desulfovibrio piger ATCC 29098]
          Length = 345

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 63/193 (32%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +R        +  S    ++   Q      + ++    G  +   P 
Sbjct: 74  CRRNCRYCG----LRHENRQLSRYSLSAAELLRAASQAVA-AGVDTLVLQSGE-TARTPL 127

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A ++ G+ + + +   + +  +          +  +R+AG +R  L  ++ + +    
Sbjct: 128 WLAQVVRGLKERFGLPVTLSVGEQPR------EWYALWREAGADRFLLKHETADARLYAA 181

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L   +  ++ + A+     +   +    +  +P Q       ++       V        
Sbjct: 182 LHPGYRLADRLRALSWLAELGYEVGSGFMVGVPGQRPESLVDDILLVRDMRVAMCGAGPF 241

Query: 208 TIEKGTLFYKMHK 220
             +  T   +  +
Sbjct: 242 VPQADTPLGRQPR 254


>gi|89067277|ref|ZP_01154790.1| MiaB-like tRNA modifying enzyme [Oceanicola granulosus HTCC2516]
 gi|89046846|gb|EAR52900.1| MiaB-like tRNA modifying enzyme [Oceanicola granulosus HTCC2516]
          Length = 418

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 25/205 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  +  G    + +   + +++ +        + +      +GG  P
Sbjct: 148 CDHRCTFC-----IIPFGRGNSRSVPAGVVVEQIKRLVDRGYNEVVLTGVDLTSWGGDLP 202

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSV----EVNNFQGYRKAGVNRISLG 136
           +     ++   IL  +     +  +   +IEA+ + +                +  + L 
Sbjct: 203 AQPRLGDLVMRILRLVPDLPRLRISSIDSIEADDNLMLAIATEPRL-------MPHLHLS 255

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +   L+  
Sbjct: 256 LQHGDDLILKRMKRRHLRDDAIRFTEEARRLRPDMTFGADIIAGFPTETEAHFANSLRLV 315

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
               +  L ++  +   GT   +M 
Sbjct: 316 EECDLTWLHVFPYSPRAGTPAARMP 340


>gi|317472764|ref|ZP_07932076.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
 gi|316899756|gb|EFV21758.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
          Length = 470

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 68/205 (33%), Gaps = 16/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C YC     +  Y  G+E   +     ++ +  L        +  G    S    L
Sbjct: 187 CNNFCSYC-----IVPYVRGRERS-RKPEDIIREIEGLVQEGVREVMLLGQNVNSYGKNL 240

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            EP + A +L  I +   ++      +  +P  +     +    +      + L VQS  
Sbjct: 241 DEPVSFAQLLQKIEQIEGLARIRF--MTPHPKDLSDELIEVMASSKKICRHMHLPVQSGS 298

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++     +A     +   P ++   D+I   P +T   +E  L        
Sbjct: 299 SRILKKMNRHYTKESYLALAEKIKEKIPGIAMTTDIIVGFPGETEEDFEETLDVVRKVKF 358

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D    +  +   GT    M    + 
Sbjct: 359 DSAYTFVYSKRTGTPAAAMEDQVEP 383


>gi|284036269|ref|YP_003386199.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
 gi|283815562|gb|ADB37400.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
          Length = 449

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        + + I + +   + + +  G + I       G   LI  Q
Sbjct: 161 CDYPCAYC---TIPLARGKSRSDTIANVVKAAREIAER-GVKEIVLTGVNIGDFGLINGQ 216

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
                 D +     V       I    P+ +           K  V    + +QS   + 
Sbjct: 217 RTETFFDLVQALDEVDGIERFRISSIEPNLLTDEIIAFVAQSKRFVPHFHIPLQSGSNRV 276

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +     +  +   + + P   +  D+I   P +T  +++          + +L
Sbjct: 277 LGLMRRRYKRELYVDRVEKIKELMPHACIGVDVIVGHPGETDVEFKETYMFLNELPISYL 336

Query: 203 SLYQLTIEKGT 213
            ++  +    T
Sbjct: 337 HVFTYSERPNT 347


>gi|312897805|ref|ZP_07757221.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310621189|gb|EFQ04733.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 369

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 71/202 (35%), Gaps = 11/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     + F  +   +++ M Q        S+    G     + +
Sbjct: 62  CMKNCLYCG----IRRENGKVKRFRTAL-KDIESMAQWAYENGYGSVTLQSGE---RQDE 113

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                ++ + +      +  + I           ++ + +AG +R  L +++   +    
Sbjct: 114 AFIHDVEAMIRTVKAIGDGALGITLCVGEQSEETYRRWFEAGAHRYLLRIETSNRKLYET 173

Query: 148 LGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  +   H+  +    +     I  ++   ++  LP QT+     ++       +D + +
Sbjct: 174 LHPHDGLHSWQKRYDCLKALDRIGYQVGTGVMIGLPGQTVEDLADDILFYKKENIDMIGM 233

Query: 205 YQLTIEKGTLFYKMHKDGDLVL 226
               I   T   +   + DL +
Sbjct: 234 GPYVIHGETPLGQYAVNEDLDI 255


>gi|310779510|ref|YP_003967843.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
 gi|309748833|gb|ADO83495.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
          Length = 437

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +   ++S L E +   ++      I  I  G     + E 
Sbjct: 157 CNNFCSYC---KIPFARGKSRSRKLKSILKEAVILAKEGFKEIIIIGINLGVYGEDIPEN 213

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +   +LD I+K   +           P  +     +  +     +  + + +QS +++ 
Sbjct: 214 GDFETLLDEISKVDGIERIR--IGSMYPDKISDRFIELMKNNSKLMPHLHISLQSCDDEI 271

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + RN+++      +   +N    +  + D+I   P +    +E  +          L
Sbjct: 272 LKAMNRNYDSQLIKERLLKLKNTVENIEYTADVIVGFPGENEKNFENTVSVIKEVGFSDL 331

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++Q +  + T   ++ +  D
Sbjct: 332 HIFQYSDRENTAASRLPEKVD 352


>gi|226311621|ref|YP_002771515.1| hypothetical protein BBR47_20340 [Brevibacillus brevis NBRC 100599]
 gi|226094569|dbj|BAH43011.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 452

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 73/195 (37%), Gaps = 9/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S + + Q + +      + +    GG    +E  
Sbjct: 154 CNNFCTFC---IIPWARGLMRSRKPESVVEQAQKLVEAGYLEIVLTGIHTGGYGEDLEDY 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +     +    +   V  + + +Q+ +++ L
Sbjct: 211 NLAKLLIDLHQVEGLKRIRISSIEAS--QITDEVIEVINNSDRVVRHLHVPLQAGDDEVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +E    +   R       ++ D+I   P +T  Q+    +         + 
Sbjct: 269 KRMRRKYTTAEFYERMVKVREALPGAAITTDVIVGFPGETEEQFWNGYEFMKKIGFAEMH 328

Query: 204 LYQLTIEKGTLFYKM 218
           ++  ++  GT   +M
Sbjct: 329 VFPYSMRTGTPAARM 343


>gi|222151475|ref|YP_002560631.1| hypothetical protein MCCL_1228 [Macrococcus caseolyticus JCSC5402]
 gi|222120600|dbj|BAH17935.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 448

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   + Q      + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKEVVRQATQLVQSGYQEIVLTGIHTGGYGEDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         K+   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETIDGLKRIRISSIEAS--QLTDEVIDVIDKSNKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  S     +     I P ++   D+I   P +T  +++      L +    L 
Sbjct: 268 KRMRRKYTMSHFSERLKKLHAIMPGLAVTSDVIVGFPGETEEEFQETYDFILQHGFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  ++  GT   +M    D
Sbjct: 328 VFPYSMRTGTPAARMTDQID 347


>gi|239617933|ref|YP_002941255.1| MiaB-like tRNA modifying enzyme YliG [Kosmotoga olearia TBF 19.5.1]
 gi|239506764|gb|ACR80251.1| MiaB-like tRNA modifying enzyme YliG [Kosmotoga olearia TBF 19.5.1]
          Length = 433

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 73/240 (30%), Gaps = 26/240 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS-----FLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C + C +C   S     +      I+          ++ +  ++   +   +   G    
Sbjct: 147 CDRGCAFCSIPSFKGSSRSRPIEEIEKEVCFLVSEGIREIVLVSQDTTQYGVDIYG---- 202

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               Q +  +L  + +           +  +P  +         K    VN   + VQS 
Sbjct: 203 ---KQALPDLLKSLNEIPG--DFWIRVMYLHPDHLTEGIINSILKLEKVVNYFDVPVQSG 257

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR   A E  A      A+     +   ++   P +T   +E  L+      
Sbjct: 258 SDYILKRMGRTKKAGELKAMFEKIRAKESDVTLRTTIMVGFPGETRRTFEETLEFVNDVK 317

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D L  +  + E+GT  Y      D  +               +       +YE++   F
Sbjct: 318 FDKLGGFVYSPEEGTPAYSFKMTIDENMAR--------QYLDELLDLQDEISYELNQRHF 369


>gi|159043568|ref|YP_001532362.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Dinoroseobacter shibae DFL 12]
 gi|229890517|sp|A8LSE7|MIAB_DINSH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157911328|gb|ABV92761.1| RNA modification enzyme [Dinoroseobacter shibae DFL 12]
          Length = 437

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 64/199 (32%), Gaps = 27/199 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K   +C F                  LTE + + +    R +  I       +L+  Q
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPAARVLTEARDLVE----RGVREI-------TLLG-Q 203

Query: 88  NIALILDGIAKNWTVSSN-VEIT-------IEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           N+            +  +  EI          ++P+ ++      +      +  + L V
Sbjct: 204 NVNAYHGHARGLAGLIWDLAEIDGLERIRFTTSHPNDMDDALIAAHGACDKLMPYLHLPV 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R H A   I  I   R   P +  S D I   P +T   +   +    
Sbjct: 264 QSGSDRILKAMNRKHTAESYIRLIERIRAARPDILLSGDFIVGFPGETDQDFADTMALVE 323

Query: 196 SYAVDHLSLYQLTIEKGTL 214
           +        ++ +   GT 
Sbjct: 324 AVGYGQAYSFKYSARPGTP 342


>gi|260427433|ref|ZP_05781412.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260421925|gb|EEX15176.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 417

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 77/215 (35%), Gaps = 18/215 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C     +  Y  G    + +   + +++ + Q    +  + +   G   +   
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVQ----KGFNEVVLTGVDLTSWG 197

Query: 86  PQN--IALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                   + D + +   ++    + I   +    + N           +  + L +Q  
Sbjct: 198 ADLPGTPRLGDLVMRILRITDVPRLRISSIDSIEADENLMLAIATEPRLMPHLHLSLQHG 257

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H   +AI     AR + P ++F  D+I   P +T   +E  L+      
Sbjct: 258 DDLILKRMKRRHLRDDAIRFTEEARRLRPDITFGADIIAGFPTETEAHFENSLKLVEDCH 317

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           +  L ++  +   GT   K+    +  +  E  A 
Sbjct: 318 LTWLHVFPYSSRPGTPAAKIPNKVNGTIIKERAAR 352


>gi|255326358|ref|ZP_05367442.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rothia mucilaginosa ATCC
           25296]
 gi|255296575|gb|EET75908.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rothia mucilaginosa ATCC
           25296]
          Length = 504

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  +++  +     +  ++ L    +I     G    S     
Sbjct: 170 CNNTCTFC----IVPSLRGKEKD--RRPGDILAEVQALVDDGAIEVTLLGQNVNSYGVEF 223

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   + +L    +   +          +P+    +      +    +  + + +QS  
Sbjct: 224 GDRQAFSKLLRACGEIEGLERVRF--TSPHPAMFTDDVIDAMAETPNVMPVLHMPLQSGS 281

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++ + + +  +   R   P   ++ D+I   P +T   ++  L+       
Sbjct: 282 DKVLKDMRRSYRSKKFLNILDKVRERIPNAVITTDIIVGFPGETEEDFQDTLKVVEQARF 341

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +I  GT    M
Sbjct: 342 SSAFTFQYSIRPGTPAATM 360


>gi|148284092|ref|YP_001248182.1| MiaB-like tRNA modifying enzyme [Orientia tsutsugamushi str.
           Boryong]
 gi|229890582|sp|A5CC78|MIAB_ORITB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146739531|emb|CAM79253.1| MiaB-like tRNA modifying enzyme [Orientia tsutsugamushi str.
           Boryong]
          Length = 449

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I ++P+ +       +   +  +  + L VQS   + L+ + R H     +  I   R +
Sbjct: 243 ITSHPNDMTDQLLSLHATEEKLMPFLHLPVQSGSNKILKLMNRRHTRERYLEIIQQLREL 302

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            P +    D+I   P +    +E  L  A          ++ +   GT 
Sbjct: 303 RPDIVISSDIIVGFPGEDDEDFEATLSLAKEAKFGQCYSFKYSQRPGTP 351


>gi|19703810|ref|NP_603372.1| MIAB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|81484620|sp|Q8RG43|MIAB_FUSNN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|19713958|gb|AAL94671.1| MIAB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 435

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +  +   K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVEG--DYIVRFVSPHPRDFTDDVIEVIAKNKKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q L+ + R +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILKKMRRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D+  ++  +I KGT    M
Sbjct: 326 DNSYMFMYSIRKGTKAATM 344


>gi|302037249|ref|YP_003797571.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira
           defluvii]
 gi|300605313|emb|CBK41646.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira
           defluvii]
          Length = 447

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 63/210 (30%), Gaps = 11/210 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R +              +          ++ +  G  +    +  
Sbjct: 159 CDFMCSFC--LIPFARGRERSRTAEDVLREARELAAHGYRELVLTGVNIGRYS---YQGL 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
            +  +L  +     V+     +IE  P++V     +    +    + + L +QS +   L
Sbjct: 214 GLVELLRELESVPDVTRIRISSIE--PTTVPAALLEHMAGSTKLCHYLHLPLQSGDNTIL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E    +  A  + P +    DL+   P +    +   +         +  
Sbjct: 272 QAMNRRYAVREYEELVEQALALMPDLGLGTDLMVGFPGEDEQAFANTVMTVERLPFSYFH 331

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           ++  +   GT   ++       +  +    
Sbjct: 332 VFSYSSRPGTAAARLEDQISPAVIRQRSKA 361


>gi|253682144|ref|ZP_04862941.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561856|gb|EES91308.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 433

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 65/204 (31%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-I 84
           C   C YC   F       K  +          +  +++L+       I  G    S  +
Sbjct: 152 CNNFCSYCLIPFARGAVCSKDPE--------IIIDEVKKLSEHGFKEIILSGIDIASYGV 203

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           + +    +L  +     +     + I    P     +  +     K       L +QS  
Sbjct: 204 DLEGDWNLLRVLKAIDEIEGINRVRIGSIGPEFFNEDIIKEIGSLKKLCPHFHLSLQSGC 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
             +L+ + R +   E    + L R     +S   D+I   P +T  ++E          +
Sbjct: 264 NSTLKRMNRKYTTEEFKNIVVLLRKYVKDISITTDIIVGFPGETKEEFEETYNYLKEIKL 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + +++ +   GT   KM    D
Sbjct: 324 SKMHIFKYSPRTGTRAEKMENQVD 347


>gi|242279951|ref|YP_002992080.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Desulfovibrio
           salexigens DSM 2638]
 gi|242122845|gb|ACS80541.1| RNA modification enzyme, MiaB family [Desulfovibrio salexigens DSM
           2638]
          Length = 458

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 23/197 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C   C YC     V   +  Q++  +S    ++    L           G    S     
Sbjct: 164 CDNFCAYC----IVPYTRGRQKS--RSSEAVIKECAHLVKSGVREITLLGQNVNSFGIDK 217

Query: 84  ----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
               I    +   +  I     +         ++P  +     + + +       + L V
Sbjct: 218 KGEDISFAQLLYKISAIEGLERIR-----FTTSHPKDIAPEVIKAFGELPNLCPSLHLPV 272

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ +GR ++    +  +   +   P +S   DLI   P +T   +E  +    
Sbjct: 273 QSGSDRILKKMGRKYDRERYLGIVEGLKEACPNISLTTDLIVGFPGETDEDFEQTMDMLE 332

Query: 196 SYAVDHLSLYQLTIEKG 212
               +    ++ +   G
Sbjct: 333 RVRYESSFSFKYSDRPG 349


>gi|313900870|ref|ZP_07834360.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
           HGF2]
 gi|312954290|gb|EFR35968.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
           HGF2]
          Length = 362

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 65/197 (32%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     NSH +RY++ +E+     LT       L     +      G     
Sbjct: 65  YCRNDCYYCGIRRSNSHAQRYRLKKED----ILTCCDEGYNLGFRTFVLQSGEDGYY--- 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I + +      +  I  +    E  ++Q Y  AG +R  L  ++   Q
Sbjct: 118 -TDELLIEIITDIKRRYP-----DCAITLSLGEKEKESYQCYYDAGADRYLLRHETSNAQ 171

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             R L      +      +   + I  +    ++   P QT+     +L        + +
Sbjct: 172 HYRCLHPKELTSEHRKQCLKDLKAIGFQTGCGIMVGSPSQTLKHIVEDLHFMKELQPEMV 231

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F+   
Sbjct: 232 GIGPFLPHHDTPFHNEP 248


>gi|303243568|ref|ZP_07329910.1| MiaB-like tRNA modifying enzyme [Methanothermococcus okinawensis
           IH1]
 gi|302486129|gb|EFL49051.1| MiaB-like tRNA modifying enzyme [Methanothermococcus okinawensis
           IH1]
          Length = 428

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+ KC YC         KV +   I      +    +    + +  I       +     
Sbjct: 153 CIGKCTYC-------IVKVARGRLISYNRNLLIKKAEEFINKGVKHILITSQDTACYGFD 205

Query: 88  NIALILDGIAKNWTVSSNVEITIEA----NPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
               + + I    ++    ++ I      N + +       Y+   V++ + L +QS ++
Sbjct: 206 KNDTLPNLINDIASIDGEFDMRIGMMHAKNVTQIMDELIASYQNDKVSKFLHLPIQSGDD 265

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E I  ++  +        + D+I   P +    +E  L+       D
Sbjct: 266 KVLKDMKRGYTVDEFIDIVNEFKRKVKDLNFNTDVIVGFPTEKEENFENTLEVLKKLNPD 325

Query: 201 HLSLYQLTIEKGTLFYKM 218
           ++   + T  + T   K+
Sbjct: 326 YIHGAKYTQRRHTEAAKL 343


>gi|281412626|ref|YP_003346705.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|281373729|gb|ADA67291.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 551

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 35/253 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIFFG----G 78
           C ++  +C F +    +   +   +Q+ L E++ +     R     R+ + + FG    G
Sbjct: 184 CERR-TFCSFCTEPLLHGRLKSRDVQAILKEIESLYMTGCRAFRFGRAANILAFGSDRNG 242

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN-----FQGYRKAGV--N 131
           G PS   P+ +  +  G  +       +          V          +   +     +
Sbjct: 243 GKPS---PEILEELYSGTREVAPHLEVLHTDNANPSYLVTHERECRKIVETIVRYNTPGD 299

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM---------SFDLIYALPKQ 182
             S GV+S +E  L+      +  E + AI +   I               +LI+ LP +
Sbjct: 300 VFSFGVESFDESVLKKNNIQGSPEEFLKAIAVVNEIGGVRVDGIPKLLPGVNLIFGLPGE 359

Query: 183 TMTQWEME---LQRALSYA--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           T    +     L+R L     +  +++ +L    GT  Y+ +          ++      
Sbjct: 360 TEETLKKNYSYLKRILEEGYLLRRINIRKLLAYPGTPVYE-YLKNKKHRIKSHLHEQWKR 418

Query: 238 LTQSITSAHGLHA 250
             +       L  
Sbjct: 419 KIREEIDHEMLKR 431


>gi|310287756|ref|YP_003939014.1| RNA modification enzyme, MiaB family [Bifidobacterium bifidum S17]
 gi|309251692|gb|ADO53440.1| RNA modification enzyme, MiaB family [Bifidobacterium bifidum S17]
          Length = 479

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 78/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 181 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRRCVDEGAKEVTLLGQNVNSFGYGIG-- 235

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L        +          +P++   +      +    ++++ + +QS
Sbjct: 236 ---DRYAFSKLLRACGDIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHMPLQS 290

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   +E  +      
Sbjct: 291 GSDKILRAMRRSYRSAKFLDILRKVREAMPDAQISTDVIVGFPGETDEDFEATMDVVRQA 350

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  ++ +   GT   +M       +    + +      +T+   +       E+
Sbjct: 351 RFQSAFTFEYSPRPGTPAAEMEQVPHEVVQERFDRLVKLQEQITEEELAKFEGRDVEV 408


>gi|227500636|ref|ZP_03930685.1| biotin synthase [Anaerococcus tetradius ATCC 35098]
 gi|227217223|gb|EEI82567.1| biotin synthase [Anaerococcus tetradius ATCC 35098]
          Length = 347

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S   ++    +L       +    GG        
Sbjct: 55  CKNDCYYCG----IRKSNYHVERYRLS-EEDIISCAKLGYKLGYRTFVLQGGEDGYFTDD 109

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  I          +I I  +       +F+   +AG +R  L  ++ ++   + 
Sbjct: 110 IMVDIVKKIKALHD-----DIAITLSLGERSYESFKRLFEAGADRYLLREETSDKDHYQK 164

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L  +  +      A+   + I  ++    +   P QT      +L+         + +  
Sbjct: 165 LHPSSMSFENRRDALRKLKEIGFQVGGGFMVGSPYQTTESIIKDLRFLEELQPAMIGIGP 224

Query: 207 LTIEKGTLFYKMHK 220
              +  T F     
Sbjct: 225 YMTQHDTPFKDFPN 238


>gi|209558870|ref|YP_002285342.1| hypothetical protein Spy49_0309 [Streptococcus pyogenes NZ131]
 gi|209540071|gb|ACI60647.1| Conserved hypothetical protein TIGR01212 [Streptococcus pyogenes
           NZ131]
          Length = 306

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F     +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFANT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 100 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKETVRRLRH-CPNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 219 LLHLMTNTRMQRDYHEGRLKL 239


>gi|167757698|ref|ZP_02429825.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
 gi|167664580|gb|EDS08710.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
          Length = 427

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 20/231 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +     S + E++ + +      + +    G   S     
Sbjct: 152 CNQFCSYC---IIPYARGRVRSRSHDSVIREVEELARNGYKEVVLT----GIHLSSYGVD 204

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +L  I     +     I +    P  +     +             L +QS  + +
Sbjct: 205 TGDDLLSLILSIHEIEGIRRIRLGSLEPRIITEEFAKTIAGLPKMCPHFHLSLQSGCDAT 264

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R++ + E      L R  F    ++ D+I   P +T  ++           +D +
Sbjct: 265 LKRMNRHYTSEEYYEKCVLLRKYFDNPALTTDVIVGFPGETEEEFAQSKAF-----IDKV 319

Query: 203 SLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             Y+  + K +          +  +P    AV    L +   +     +YE
Sbjct: 320 DFYETHVFKYSKRAGTRAAQMEEQVPESVKAVRSNELLE--LTRRKQASYE 368


>gi|162453546|ref|YP_001615913.1| hypothetical protein sce5270 [Sorangium cellulosum 'So ce 56']
 gi|229891000|sp|A9FST8|MIAB_SORC5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|161164128|emb|CAN95433.1| hypothetical protein sce5270 [Sorangium cellulosum 'So ce 56']
          Length = 498

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 67/212 (31%), Gaps = 26/212 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFG-------- 77
           C ++C +C     +  +  G E +      + E+  +    G R ++ +           
Sbjct: 163 CDERCSFC-----IVPHTRGPERYRPSDEIVAEIAALVA-AGTREVTLLGQTVNSYRDPL 216

Query: 78  GGTP-----SLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAGV- 130
           G  P     S  +P               V     +     +P  +  +    + +  V 
Sbjct: 217 GALPRAPGASADDPDESEFAALLRRVAADVPGLARLRYTSPHPRHLTPSLVLAHAELPVL 276

Query: 131 -NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQW 187
              + + VQS  ++ LR + R +  +E +A             +S D+I   P +T   +
Sbjct: 277 PRHVHMPVQSGSDRVLRRMIRRYTRAEYVARTRALVEAVPGLTLSTDIIVGFPGETEDDF 336

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              L          L  ++ +    T   K+ 
Sbjct: 337 AATLSLVREVGFKGLFGFKYSRRPHTPALKLP 368


>gi|332299874|ref|YP_004441795.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Porphyromonas asaccharolytica DSM 20707]
 gi|332176937|gb|AEE12627.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Porphyromonas asaccharolytica DSM 20707]
          Length = 450

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 19/227 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +  Y  G+E      S + E+Q M Q  G R ++ +  G    S   
Sbjct: 164 CDNFCTYC-----IVPYTRGRERSRDPESIVREVQRMAQ-EGYREVTLL--GQNVNSYCW 215

Query: 86  PQNI---ALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                      D + K       + I     +P  ++    +           I   +QS
Sbjct: 216 QSETGVSYTFADLLRKVAEAVPTMRIRFTSPHPKDMKDETLEVMSLYPNICRHIHFPLQS 275

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L  + R +     +  +   R+  P   +S D+      +T   ++  L+     
Sbjct: 276 GSNRILERMHRRYTREWYLERVERIRDYMPDCGLSTDVFCGFSGETEEDFQETLEVMRQA 335

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +D   +++ +   GT     H   D+    +   ++     Q+  S
Sbjct: 336 RLDSAFMFKYSERPGTY-ASRHLVDDVPEEVKVERLNRMIALQNELS 381


>gi|257126661|ref|YP_003164775.1| RNA modification enzyme, MiaB family [Leptotrichia buccalis
           C-1013-b]
 gi|257050600|gb|ACV39784.1| RNA modification enzyme, MiaB family [Leptotrichia buccalis
           C-1013-b]
          Length = 441

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 63/205 (30%), Gaps = 17/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C +C     +  Y  G E  +      ++ + Q T       +F G    S     
Sbjct: 157 CNNYCTFC-----IVPYVRGMERSVP-LNEIIRDVEQYTKKGYKEILFLGQNVNSYGSDF 210

Query: 87  ----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                N A +L+  A            +  +P            +       + L +QS 
Sbjct: 211 ANGQDNFAELLEQSANVEGDFWIKY--VSPHPKDFSDEVIDVIARNPKIARMLHLPLQSG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +   E IA     +   P +    D+I   P +T   ++  +       
Sbjct: 269 STKILDSMNRGYTKEEFIALAKKIKEKIPDIGLTTDIIVGFPGETDEDFQDTMDVVNEVG 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            ++  ++  +   GT    M +  D
Sbjct: 329 FENAFMFMYSKRTGTPAATMEEQVD 353


>gi|116753836|ref|YP_842954.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
 gi|116665287|gb|ABK14314.1| Radical SAM domain protein [Methanosaeta thermophila PT]
          Length = 371

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 32  CPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C YC       S +R   +            M    + T P + +     G  P L   +
Sbjct: 159 CAYCQTPRLCGSVMRHRSIPSILS----HARMHMDLRFTSPNAFAYGS-DGLKPRLERVE 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSLR 146
            +   L  + +     +      E  P  +     +       NR +S+G QS  ++ LR
Sbjct: 214 LLLRTLSELGRPIYFGT---FPSEVRPDFISGKALELITTYCTNRTLSIGGQSGSDRILR 270

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL---QRALSYAVDHLS 203
            + R H   +   A  +  +     + DLI  LP +T     + +   ++ +      + 
Sbjct: 271 DINRGHCVHDIEMACEICLDHEIVPNVDLILCLPGETEEDQMLTVELAEQIVRMG-GRVR 329

Query: 204 LYQLTIEKGTLFYKM 218
           +++     GT     
Sbjct: 330 VHRFMPLPGTPLESQ 344


>gi|229496636|ref|ZP_04390350.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316533|gb|EEN82452.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 445

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +  +   V +   I S + + + + Q  G + I       G       +
Sbjct: 165 CNYGCTYC---TIPKARGVSRNGSIASLVAQAERVAQ-EGGKEIVLTGVNIGDFGRSTGE 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      ++E  P  +     +     ++ +    L +QS  +  L
Sbjct: 221 QFVDLVRALDQVNGIERYRISSLE--PDLLSDELLEVVAQSRSFMPHWHLPLQSGSDTVL 278

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R +        +   + + P   +  D+I  +  +T+  +E  L       V  L 
Sbjct: 279 ALMKRRYRTQLFSDRLARIKEMMPAAFIGVDVIVGMRGETLEFFEESLAYLEGQPVTQLH 338

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 339 VFSYSERSGTP 349


>gi|154491690|ref|ZP_02031316.1| hypothetical protein PARMER_01301 [Parabacteroides merdae ATCC
           43184]
 gi|154087931|gb|EDN86976.1| hypothetical protein PARMER_01301 [Parabacteroides merdae ATCC
           43184]
          Length = 440

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + + +    G + I       G       +
Sbjct: 160 CDYFCSYC---TIPFARGRSRNGTIASMVKQAEEVAS-NGGKEIVLTGVNIGDFGKSTGE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F    +       + +QS  ++ L+ 
Sbjct: 216 TFIDLIRALDEVEGIVRYRISSIEPNLITDEAIDFVACSRRFAPHFHIPLQSGSDEVLKL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++       I   + + P   +  D+I     +T T +E       S  +  L ++
Sbjct: 276 MRRRYDTILFRHKIEKIKEVMPHAFIGVDVIVGTRGETDTCFEEARTFIESLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|91204408|emb|CAJ70908.1| similar to Mg-protoporphyrin monomethylester cyclase [Candidatus
           Kuenenia stuttgartiensis]
          Length = 473

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 63/195 (32%), Gaps = 8/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC  +S     ++  +++       ++           + +   G     ++  
Sbjct: 209 CSYRCIYCVPSSLSFSRELEYKHYFDK-KPPVRKRSSENIIGEFALLKSQGYKAVNMQDD 267

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                    +        +  ++     A    +     +    A    I LGV+S  ++
Sbjct: 268 QFVWGEERTIKICEGIKDL--DIVWGCSARSDHLTEPIVRAMAAANCKFIDLGVESFNQE 325

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL-PKQTMTQWEMELQRALSYAVDHL 202
            L ++ ++ +  +   AI L +        ++++   P +TM       +      VD +
Sbjct: 326 ILDYVKKDIDVKKNEEAIRLVKKYGISAKINIMFGASPLETMETIRKNTEEVKRLKVDQV 385

Query: 203 SLYQLTIEKGTLFYK 217
                    GT FYK
Sbjct: 386 MYNIANPFPGTDFYK 400


>gi|125973301|ref|YP_001037211.1| RNA modification protein [Clostridium thermocellum ATCC 27405]
 gi|256003782|ref|ZP_05428770.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           2360]
 gi|281417504|ref|ZP_06248524.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
           JW20]
 gi|229890498|sp|A3DDI9|MIAB_CLOTH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|125713526|gb|ABN52018.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium thermocellum
           ATCC 27405]
 gi|255992343|gb|EEU02437.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           2360]
 gi|281408906|gb|EFB39164.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
           JW20]
 gi|316940466|gb|ADU74500.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           1313]
          Length = 480

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 72/240 (30%), Gaps = 21/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +S    ++ +R L           G    S  +  
Sbjct: 198 CNNFCTYC-----IVPYVRGRERS-RSMDDILEEVRMLGRQGFKEITLLGQNVNSYGKDI 251

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                   + +       +E      ++P  +  +     R        + L  Q+   +
Sbjct: 252 GDGTSFAELIREVNKIPGIERIRFTTSHPKDLSDDLIYAMRDCEKVCEHLHLPFQAGSTR 311

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +   + I  +   +   P ++   D+I   P +T   +   L        D+
Sbjct: 312 ILKLMNRKYTKEDYINLVAKIKENIPDIALTTDIIVGFPGETEEDFSDTLDILEKVRFDN 371

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
              +  +   GT   KM                     Q +       + EI N +FLG 
Sbjct: 372 AYTFLYSKRTGTPAAKMEDQVP--------EEVKKERFQRLLETQNRISKEI-NDTFLGK 422


>gi|315101123|gb|EFT73099.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL046PA1]
          Length = 494

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 RMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            ++   D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HVAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|212715618|ref|ZP_03323746.1| hypothetical protein BIFCAT_00517 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660985|gb|EEB21560.1| hypothetical protein BIFCAT_00517 [Bifidobacterium catenulatum DSM
           16992]
          Length = 484

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 88/265 (33%), Gaps = 23/265 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L+ + + +    ++ +  +V     C   C +C             +      L E++
Sbjct: 159 EELNYFPSQLPTDRASKVSSWVAISVGCNNTCTFC---IVPTTRGKEHDRRPGDILAEIR 215

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L    +   +          +P
Sbjct: 216 QCVDEGAKEVTLLGQNVNSFGYGIG-----DRFAFSKLLRACGEIEGLERVRF--TSPHP 268

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 269 AAFTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILRKIREAMPDAQ 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  L+            +  +   GT   +M       +    
Sbjct: 329 ISTDIIVGFPGETEEDFQETLRVVEEARFASAFTFIYSPRPGTPAAEMEQVPHDVVQDRF 388

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEI 253
           E +      +T+           E+
Sbjct: 389 ERLVALQERITEENLKTFEGRDVEV 413


>gi|259417985|ref|ZP_05741904.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259346891|gb|EEW58705.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 419

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 21/217 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 148 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 202

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  +     +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 203 ATPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSLQ 257

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+    
Sbjct: 258 HGDDLILKRMKRRHLRDDAIRFAEDARKLRPEMTFGADIIAGFPTETEAHFENSLKLVTE 317

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +  L ++  +  +GT   K+    +  +  +  A 
Sbjct: 318 CDLTWLHVFPYSKREGTPAAKIPSQVNGNVIKDRAAR 354


>gi|224014702|ref|XP_002297013.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968393|gb|EED86741.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 432

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 71/193 (36%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C ++C YC          V Q   ++S + E++ + + +G + ++ +          ++ 
Sbjct: 145 CNERCTYC---IVPTTRGVEQSRPVESIVDEVKKLVE-SGYKEVTLLGQNIDAYGRDMLP 200

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +  + +L  +     +     +T  ++P  + +       +         +  QS    
Sbjct: 201 KRKFSDLLRIVGGVDGLERLRFVT--SHPRYMSLGVVDAVAETPTACEYFHVPFQSGSND 258

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR H   + +  +   R   P   ++ D+I   P +T   ++  L    +   D+
Sbjct: 259 ILKAMGRGHTREKFLGIVDRIRQRLPDAAITADVIVGFPGETEQDFQDTLDLMETVVFDN 318

Query: 202 LSLYQLTIEKGTL 214
           ++    +    T 
Sbjct: 319 VNTAAYSPRPNTP 331


>gi|254456428|ref|ZP_05069857.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207083430|gb|EDZ60856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 442

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 13/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E + +     +   + L    +   +  G    +    +
Sbjct: 158 CDKFCHFC-----VVPYTRGPE-YSRPLEQILDEAKYLADNGAQEIVLLGQNV-NAYSYE 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               + + I +   +     I     +P  +  +  + Y+ +   +  + L VQS   + 
Sbjct: 211 Q-NKLSNLIFEIEKIPQIKRIRYTTSHPKDMSDDLIKVYKSSKKLMPLVHLPVQSGSNKI 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H  SE        ++I P +  S D I   P +    ++   +        + 
Sbjct: 270 LERMNRKHTISEYHKIFDKLKDINPNIEFSSDFIIGYPGEEEEDFQATFELINKIKFINS 329

Query: 203 SLYQLTIEKGT 213
             +  +   GT
Sbjct: 330 FSFIFSPRPGT 340


>gi|238063462|ref|ZP_04608171.1| RNA modification protein [Micromonospora sp. ATCC 39149]
 gi|237885273|gb|EEP74101.1| RNA modification protein [Micromonospora sp. ATCC 39149]
          Length = 511

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 62/200 (31%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C     V   +  +++  +     +  +R L     +     G    S  +E 
Sbjct: 164 CNNTCTFC----IVPALRGREKD--RRPGDVLAEVRALVDSGVLEVTLLGQNVNSYGVEF 217

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +       +     +     +     +P     +      +     + + + +QS  + 
Sbjct: 218 GDRYAFGKLLRACGEIDGLERVRFTSPHPKDFTDDVIAAMAETPNVCHSLHMPLQSGSDD 277

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R++ +   +  I   R   P   ++ D+I   P +T   ++  L          
Sbjct: 278 VLRAMRRSYRSERYLGIIERVRAAMPDAAITTDIIVGFPGETEADFQRTLDVVREARFSS 337

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
              +Q +   GT    M   
Sbjct: 338 AFTFQYSKRPGTPAATMPDQ 357


>gi|213019557|ref|ZP_03335363.1| trna-i(6)a37 thiotransferase enzyme [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|212994979|gb|EEB55621.1| trna-i(6)a37 thiotransferase enzyme [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 428

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 17/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C K C +C     V  Y  G E + +      +    L    +      G    +     
Sbjct: 145 CDKFCTFC-----VVPYTRGAE-YSRPVNEIFREALNLVKNGAKEITLLGQNVNAYHGEC 198

Query: 84  -IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  ++  IAK   +      T  ++P  +  + +  + +    +  + L VQS 
Sbjct: 199 EGEVWDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLVHAEESKLMPFVHLPVQSG 256

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R H A E +  I   R + P +  S D I   P +T   +E  ++      
Sbjct: 257 SNKILHAMNRKHTAEEYLGIIDRLRKLKPEIEFSSDFIVGFPGETEKDFEETMKLVEKVK 316

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 ++ +   GT   +        + +E +      +++     + 
Sbjct: 317 YAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQELISKQQLEFNQ 365


>gi|192292434|ref|YP_001993039.1| radical SAM domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192286183|gb|ACF02564.1| Radical SAM domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 633

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C   +FN    R +  Q+         +  ++ L     I SI +        
Sbjct: 266 CRARCTFCTVRNFNGFGLRQRTVQD--------VIDEVKHLVTDHGIRSIDWLDDDLLWD 317

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +AL      +   +       + A   +++    Q    +G+    +GV+S  +  
Sbjct: 318 RDRALALFRGLAEQVPGLEWTASNGLIA--VAIDDEMMQAMVASGLRAFKIGVESGNDAM 375

Query: 145 LRFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + +     +  A   L A+     +S + I   P +T  Q       A+  A D  S
Sbjct: 376 LKTIKKPTTKPKLRARAGLFAKYPDVFVSTNFIIGFPDETFGQMMDSYDLAVELASDWAS 435

Query: 204 LYQLTIEKGTLFY 216
            Y     KGT  +
Sbjct: 436 FYICQPLKGTEMF 448


>gi|94993705|ref|YP_601803.1| Radical SAM superfamily protein [Streptococcus pyogenes MGAS10750]
 gi|94547213|gb|ABF37259.1| Radical SAM superfamily protein [Streptococcus pyogenes MGAS10750]
          Length = 312

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 49  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNT---HDTVDV 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 106 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 166 NRAHSYDLYKDTVRRLRHY-PNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 224

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 225 LLHLMTNTRMQRDYHEGRLKL 245


>gi|332827121|gb|EGJ99906.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 431

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 10/252 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       +++  Q   ++  +  +  +        + +           +  
Sbjct: 146 CNRACSYCSIPIMTGKHQSRQIEEVEEEVRHL--VASGVKEFQVIAQDLSYYGLDNYKQA 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  ++D IAK   V         A P++   +     R        + + +Q + +  L
Sbjct: 204 KLPELIDRIAKIEGVEWIRLHY--AYPANFPYDLLPVMRNNENVCKYLDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + RN    +    I   R   P +     L+   P ++   +E  LQ       D + 
Sbjct: 262 KKMRRNITKEQTYNLIKRIREEVPGIHIRTTLMVGHPGESHKDFEELLQFVKDVRFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            +  + E GT  Y  H   ++    +   +D+    Q   +       +I N   +  + 
Sbjct: 322 AFPYSHEDGTYAY-AHYRDEISDAVKQERMDVLMALQERIALDINEQ-KIGNTLKVIVDR 379

Query: 264 LHNLNYWRYGDY 275
             +  Y    +Y
Sbjct: 380 EESDYYIGRTEY 391


>gi|322800811|gb|EFZ21687.1| hypothetical protein SINV_11782 [Solenopsis invicta]
          Length = 538

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 79/238 (33%), Gaps = 28/238 (11%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++      +         S  +  +G    + + 
Sbjct: 209 CLNQCTYCK-TKHARGELGSYPPEEIVERAKQAFEEGVCELWLTSEDTGAYGRDIGTNL- 266

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  ++D       +     + +        + +     K        + + + VQS 
Sbjct: 267 PELLWQLVDV------IPDGCMMRVGMTNPPYILEHLDEMAKILQHPRVYSFLHIPVQSG 320

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +Q L  + R +  +E    ++          ++ D+I   P +T   +E  +     Y 
Sbjct: 321 SDQVLADMKREYTRAEFEHVVNFLSERVPGLTIATDIICGFPTETEMDFEETMTLCQKYK 380

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              L + Q     GT   +M     L +P++ V      L++         +YE+  H
Sbjct: 381 FPSLFINQYFPRPGTPAARM-----LKVPAQKVKARTKRLSE------FFQSYELYGH 427


>gi|182417560|ref|ZP_02626322.2| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237667762|ref|ZP_04527746.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182378573|gb|EDT76101.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237656110|gb|EEP53666.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 464

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 68/216 (31%), Gaps = 23/216 (10%)

Query: 20  GVYVHW-PFCVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
             Y+     C   C YC        F S      + +   + S    ++ +  +    ++
Sbjct: 166 SAYIRIAEGCNNFCTYCIIPKIRGKFRSRKMENILKEAEELAS--QGIKELILIAQDTTM 223

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
                 G        +N+  +L+ ++K   +       +   P  +         +    
Sbjct: 224 YGSDIYG-------KKNLHELLNELSKIEGIEWIR--VLYCYPEEIYDELIDEMAQNNKV 274

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
           V  + L +Q +    L+ +GR       +  I   R   P M      I   P++T   +
Sbjct: 275 VKYLDLPIQHISNHVLKLMGRKTTKEAILKKIDTLRERIPGMIIRTTFIVGFPQETEEDF 334

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                    Y ++ + ++  + E+ T   +M    D
Sbjct: 335 NEIKDFLQDYKLEKVGVFTYSQEENTPAARMDGQID 370


>gi|18310627|ref|NP_562561.1| radical SAM domain protein [Clostridium perfringens str. 13]
 gi|18145308|dbj|BAB81351.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Clostridium perfringens str. 13]
          Length = 559

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 23/202 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  + R           + +A         DLI  LP + +  ++       +   D
Sbjct: 287 NEVLHNINRYITYENIKEKVLKVASGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRPD 346

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L + KG+   +  +  
Sbjct: 347 EIQLGFLKLLKGSSMREEAEKW 368


>gi|325263702|ref|ZP_08130435.1| radical SAM protein, family [Clostridium sp. D5]
 gi|324030740|gb|EGB92022.1| radical SAM protein, family [Clostridium sp. D5]
          Length = 308

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 15/219 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS--IFFGGGTPSLIEPQNI 89
           C +C   S                       R+L+G R + S   +    T +      +
Sbjct: 47  CIFC---SSEGSGDFAGSRACSISEQIAAGKRELSGKRPVHSYIAYLQAYTNTYAP---V 100

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-----SLGVQSLEEQS 144
             + +   +         ++I   P  +  +  +   +  +NRI      LG+Q++   +
Sbjct: 101 CRLEELYMEAIADPEVRILSIATRPDCLGTDVLELLGR--INRIKPVWIELGLQTIHPAT 158

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            R++ R +       A+   R++   +    I  LP +T  Q    +       +  + L
Sbjct: 159 ARYIRRGYELPVFEKAVRDLRSMGITVIVHTILYLPGETNEQMLETVDYLNRMDIQGIKL 218

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L I KGT     ++     +P     +    +  S  
Sbjct: 219 QLLHILKGTDLALEYERHPFPVPDMEDYIQFLGMCISRL 257


>gi|313887538|ref|ZP_07821221.1| iron-only hydrogenase maturation rSAM protein HydE [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846416|gb|EFR33794.1| iron-only hydrogenase maturation rSAM protein HydE [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 17/194 (8%)

Query: 27  FCVKKCPYCD--F-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC   F N   +R ++ +E  +         + + +    I +I   GG    
Sbjct: 63  YCKNNCYYCGLRFANKEAKRVRLSKEEILD--------LAKHSVDLGIKTIVMQGGEDEF 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I + +   S+V IT+          +F+  +  G +R  L  ++  + 
Sbjct: 115 YSLEYLKEIIGEIKEKF---SDVAITLSLGERDF--KDFEVLKNMGADRYLLRHETYSKS 169

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  +  +    I +I   + +  +    ++   P Q +     +L+  L    + +
Sbjct: 170 HYERLHPSSMSFQHRIDSILKLKELGFQTGCGMMVGSPYQELENLYEDLKFILKLKPEMV 229

Query: 203 SLYQLTIEKGTLFY 216
            +     +  T F 
Sbjct: 230 GIGPFIPQHDTPFR 243


>gi|300022013|ref|YP_003754624.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523834|gb|ADJ22303.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Hyphomicrobium denitrificans ATCC 51888]
          Length = 472

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  +     + I+  + E++++++      +  IFF   T +     
Sbjct: 206 CKSRCTFCLWPQTVGGHNYRVRS-IEHVIEEVKYVQREFP--QVKEIFFDDDTLT----D 258

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N+  +     +   +        +AN   V     +  +  G+  + +G +S  +Q L  
Sbjct: 259 NLPRVEALAKELGKLGVVWSCNAKAN---VPRATLEVLKDNGLRLLLVGYESGNQQILHN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A       R +   +    I  LP +T    +  L  A       + +   
Sbjct: 316 IKKGLRVDVAKRFSKDCRELGIVIHGTFILGLPGETRETIQETLAFAKEVNPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  Y  
Sbjct: 376 APYPGTFLYNQ 386


>gi|255011267|ref|ZP_05283393.1| hypothetical protein Bfra3_19146 [Bacteroides fragilis 3_1_12]
 gi|313149079|ref|ZP_07811272.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137846|gb|EFR55206.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 439

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   + S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTVASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEYVSTSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +      + I   + + P   +  D+I     +T   +E   +      +  L 
Sbjct: 273 QLMRRRYGTELFASKIAKIKEVMPDAFIGVDVIVGTRGETDEYFEKAYEFISGLDITQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|158522484|ref|YP_001530354.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511310|gb|ABW68277.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 468

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--FGGGTPSLIE 85
           C   C YC    H    K  ++   ++F+ E++ +    G R    I   F    P +  
Sbjct: 212 CPYHCVYC----HNIFGKKVRKRSPENFVVEIELLYHQYGVREFQIIDDIFNIDRPRM-- 265

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  I+    K       +          +   +    + AG   I+L +++   +  
Sbjct: 266 HDILRRIMSSGMKI-----KIAFPNGLRGDLLTHEDIDLLQAAGAYMITLAIETASVRMQ 320

Query: 146 RFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R H +    +  I  A +    +    +   P +T+ + +  +  A+   +D    
Sbjct: 321 KII-RKHLDIPRVMDNIAYAASRGLIVKGYFMIGFPGETVEEMKQTIDLAVKSKLDLAHF 379

Query: 205 YQLTIEKGTLFYKM 218
           + +   +GT   +M
Sbjct: 380 FTVIPFEGTELAEM 393


>gi|57168992|ref|ZP_00368121.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter coli
           RM2228]
 gi|57019658|gb|EAL56347.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Campylobacter coli
           RM2228]
          Length = 439

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 74/200 (37%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +        + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE------ISSIIAELKDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   + +   + +   P+S      +     K  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIEGIKAARILYL--YPTSASEALIKRIIASKIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N++     ++L   A + F R     I   P ++   +    +    + 
Sbjct: 258 DNMLKIMKRGANSTRLKEMLNLMKSAPDSFLRTG--FIVGHPGESDADFGELCEFIKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRVSVFAYSKEEDTAAFDM 335


>gi|152965467|ref|YP_001361251.1| RNA modification enzyme, MiaB family [Kineococcus radiotolerans
           SRS30216]
 gi|229890611|sp|A6W848|MIAB_KINRD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|151359984|gb|ABS02987.1| RNA modification enzyme, MiaB family [Kineococcus radiotolerans
           SRS30216]
          Length = 510

 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 82/270 (30%), Gaps = 26/270 (9%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  +    +V     C   C +C            ++      L E+
Sbjct: 153 LESLETFPSTLPTRRESPYAAWVSISVGCNNTCTFC---IVPALRGKEKDRRPGDVLAEI 209

Query: 60  QWMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           +    L G   +     G    +      +      +L        +          +PS
Sbjct: 210 E---ALVGEGVLEVTLLGQNVNTYGVEFGDKLAFGKLLRATGGIEGLERVRF--TSPHPS 264

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           S   +      +    +  + + +QS  ++ L+ + R++  S  +  I   R+  P   +
Sbjct: 265 SFTDDVVDAMAETPNVMPSLHMPLQSGSDRVLKAMRRSYRQSRFLGIIDRVRSSIPDAAI 324

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + D+I   P +T   +E  L             +Q +   GT    M             
Sbjct: 325 TTDIIVGFPGETDEDFEQTLHVVEQARFSSAFTFQYSPRPGTPAATMGDQIP-------- 376

Query: 232 AVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
              +    + +T+      YE  N +  G 
Sbjct: 377 KRVVQERYERLTALQDRITYE-DNQAQTGR 405


>gi|331091759|ref|ZP_08340591.1| hypothetical protein HMPREF9477_01234 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402658|gb|EGG82225.1| hypothetical protein HMPREF9477_01234 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 345

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 13/191 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +R+       +  +    ++  R +  P    +    GG       
Sbjct: 61  FCKNDCFYCG----IRKSNGNACRYRLTKEEILECCR-IGYPLGFRTFVLQGGEDGYFTD 115

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  I+  I   +      +  I  +      ++++ +  AG +R  L  ++   +  +
Sbjct: 116 AKMTDIISSIKAVYP-----DCAITLSVGEKSYDSYKAFFDAGADRYLLRHETYVSEHYK 170

Query: 147 FLGRNHN--ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            L   H   A +    +   ++I  ++    +   P QT      ++          + +
Sbjct: 171 KLH-PHTLSAKKRQQCLWDLKDIGYQVGTGFMVGSPYQTTENLAEDMLFLKKLNPQMVGI 229

Query: 205 YQLTIEKGTLF 215
                   T F
Sbjct: 230 GPFIPHHDTPF 240


>gi|229817424|ref|ZP_04447706.1| hypothetical protein BIFANG_02686 [Bifidobacterium angulatum DSM
           20098]
 gi|229785213|gb|EEP21327.1| hypothetical protein BIFANG_02686 [Bifidobacterium angulatum DSM
           20098]
          Length = 484

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 20/206 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 186 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRQCVDEGAKEITLLGQNVNSFGYGIG-- 240

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L        +          +P++   +      +    ++++   +QS
Sbjct: 241 ---DRFAFSKLLRACGDIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHFPLQS 295

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   ++  L+     
Sbjct: 296 GSDRILRAMRRSYRSAKFLDILRKIRQAMPDAQISTDIIVGFPGETEEDFQETLRVVEEA 355

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  +  +   GT   +M +   
Sbjct: 356 RFSSAFTFIYSPRPGTPAAQMEQLPH 381


>gi|224371641|ref|YP_002605805.1| putative methylthioadenine synthetase [Desulfobacterium
           autotrophicum HRM2]
 gi|223694358|gb|ACN17641.1| putative methylthioadenine synthetase [Desulfobacterium
           autotrophicum HRM2]
          Length = 437

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 22/198 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTP-- 81
           C   C YC            +   +   L  + ++ +          I +  +G   P  
Sbjct: 154 CNAFCSYC---IVPYARGRSRSMPMDEVLAHLAYLHEKGYKEVILTGIHTGAWGADFPEK 210

Query: 82  -SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN--FQGYRKAGVNRISLGVQ 138
            S ++      +L  I +   +      +IE  P  +               +   + +Q
Sbjct: 211 RSFLD------LLKTIVEKSPIHRVRISSIE--PIEISDEIIGLAADHAIICDHFHIPLQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S ++  L+ +GR ++       +       PR  M  D++   P ++   +E        
Sbjct: 263 SGDDGILKRMGRPYDTGYFRELVLKIHETMPRAAMGIDVLQGFPGESDQAFERTHALLAG 322

Query: 197 YAVDHLSLYQLTIEKGTL 214
             + +L ++  +  KGT 
Sbjct: 323 LPISYLHVFPFSPRKGTP 340


>gi|169342820|ref|ZP_02863854.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|169299077|gb|EDS81149.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
          Length = 501

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 25/203 (12%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 125 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 172

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 173 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 228

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R          + L       +    DLI  LP + +  ++       +   
Sbjct: 229 NEVLHNINRYITYENIKEKV-LKVAAGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRP 287

Query: 200 DHLSLYQLTIEKGTLFYKMHKDG 222
           D + L  L + KG+   +  +  
Sbjct: 288 DEIQLGFLKLLKGSSMREEAEKW 310


>gi|218779021|ref|YP_002430339.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760405|gb|ACL02871.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 471

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 5/182 (2%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C Y C F S                +   + +  L     +          +  +   + 
Sbjct: 213 CSYGCGFCSVPALTGGKIRFRAPQLVA--EELMALKTRFGVQEAQIIDDNFTANKAHALN 270

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
                I     +       +     +++    Q  + AG   +SLG++S   + L  + +
Sbjct: 271 TCRALINSGVNLPWTCPNGV--RMENLDKELIQAMKGAGCYSVSLGLESGSAKVLNRMKK 328

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
             +       + L       ++   I   P++T    +  L  A S  +   +    T  
Sbjct: 329 GLSLDHVGERVELLAKAGLEVNGFFILGYPEETRQDMKATLDFAKSLPLTRANFSLFTPL 388

Query: 211 KG 212
            G
Sbjct: 389 PG 390


>gi|152991220|ref|YP_001356942.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
 gi|238066418|sp|A6Q526|RIMO_NITSB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|151423081|dbj|BAF70585.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
          Length = 435

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C ++C +C   S   +    Q   I+  + E+   + L         F    + S +   
Sbjct: 146 CNQQCSFCAIPSFKGK---LQSRPIEDIVQEI---KNLVAKGYKDFTFVSQDSSSYLRDF 199

Query: 87  ---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
              +++  ++  + +   + S   + +   PS+           + V  N   + +Q + 
Sbjct: 200 GIQESLVDLIHAVEEIEGIMSARILYL--YPSTTTPKMIDAIANSPVFVNYFEMPIQHIS 257

Query: 142 EQSLRFLGR---NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R        E + A+      F R S  LI   P ++   +   ++    + 
Sbjct: 258 DSLLKKMKRGIGAQKTKELLYAMRAVPESFLRTS--LIVGHPGESEEDFHELVEFLEDFE 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D ++L+  + E+GT  Y+M
Sbjct: 316 FDRINLFAYSDEEGTKAYEM 335


>gi|78777940|ref|YP_394255.1| tRNA-i(6)A37 modification enzyme MiaB [Sulfurimonas denitrificans
           DSM 1251]
 gi|123768587|sp|Q30PR1|MIAB_SULDN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78498480|gb|ABB45020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfurimonas
           denitrificans DSM 1251]
          Length = 435

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 68/208 (32%), Gaps = 16/208 (7%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--- 71
           ++    Y++    C K C YC     V + +  + +     +          G + I   
Sbjct: 139 TSPYKAYINISIGCDKSCTYC----IVPKTRGEEISIPTELILREAQKAVKGGAKEIFLL 194

Query: 72  -SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG 129
             ++   G   S           + + +   + +   I     +P  ++    + +    
Sbjct: 195 GQNVNNYGRRFS--GEHEKVSFSELLRRLSKIDALERIRFTSPHPFHMDDEFIEEFSSNP 252

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMT 185
                + + +QS   + L+ + R +     +  +    A +    +S D+I A P ++  
Sbjct: 253 KICKSMHMPLQSGSSKVLKDMKRGYTKEWFLNRVQKLRAMSPDVSISTDIIVAFPGESDE 312

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +E  L        D +  ++ +    T
Sbjct: 313 DFEETLSIMREVKFDQIFSFKYSPRPET 340


>gi|260435870|ref|ZP_05789840.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. WH
           8109]
 gi|260413744|gb|EEX07040.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. WH
           8109]
          Length = 464

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 67/236 (28%), Gaps = 17/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC   S   + +      I+  +  +       G + I+ +      +G   P 
Sbjct: 169 CNERCTYCVVPSVRGKEQSRLPEAIKLEMEGLAAQ----GYKEITLLGQNIDAYGRDLPG 224

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +    + D +     V     I     +P                      +  Q
Sbjct: 225 ITPEGRRQHTLTDLLHHVHDVEGIERIRFATSHPRYFTERLIDACADLPKLCEHFHIPFQ 284

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +        I   R   P   +S D+I A P +T  Q+   L     
Sbjct: 285 SGDNDVLQAMARGYTVERYRRIIDRIRERMPDASLSADVIVAFPGETDAQYRRTLHLIEE 344

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              D ++    +    T       +  L    +   +   N      +      YE
Sbjct: 345 IGFDQVNTAAYSPRPNTPAAN--WENQLPEEVKVERLREINALVERCARKANTRYE 398


>gi|225163478|ref|ZP_03725792.1| 2-alkenal reductase [Opitutaceae bacterium TAV2]
 gi|224801895|gb|EEG20177.1| 2-alkenal reductase [Opitutaceae bacterium TAV2]
          Length = 494

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 27/201 (13%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-------------FFGGGTP 81
           C F    +     +   +   + E + +    G R I+ +               GG TP
Sbjct: 190 CAFCIVPKTRGDERSRPMDDIVAECRALADR-GIREITLLGQIVTSYGRRDYEHTGGITP 248

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                     +++ +     +          +P   + +    Y +       + L +QS
Sbjct: 249 -------FVQLIEKVHAIEGIDRIRF--TSPHPRGFKQDLVDAYARLPKLCEYVHLPMQS 299

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R ++       +    A       S D+I   P +T  ++E         
Sbjct: 300 GSDRILRAMHRPYSRDRYRQIVQSLRAARPDMYFSTDIIVGFPGETDAEFEDTRTLFEEC 359

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D   +++ ++  GT    M
Sbjct: 360 NYDMAYIFKYSVRTGTPAAVM 380


>gi|188589640|ref|YP_001920630.1| hypothetical protein CLH_1236 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|238065362|sp|B2V4I1|RIMO_CLOBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|188499921|gb|ACD53057.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 446

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 73/214 (34%), Gaps = 19/214 (8%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             Y+     C   C YC       +++  +       +  +         + +  +    
Sbjct: 148 SAYIRIAEGCNNFCTYCIIPKIRGKFRSRR-------MENIISEATDLASKGVKELILIA 200

Query: 79  GTPS-----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
              +     +   +N+ ++L  ++    +       +   P ++     +        V 
Sbjct: 201 QDTTQYGSDIYGKKNLHILLKELSNIEGIKWIR--VLYCYPEAIYDELIEEIAANDKVVK 258

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEM 189
            + + +Q + +  L+ +GR  +  +    I   RN  P +      I   P++T   +E 
Sbjct: 259 YLDIPIQHISDHVLKLMGRKTSKKDITDKIEKLRNKIPNIVIRTTFIVGFPQETQEDFEE 318

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            L+    Y +D + +++ + E+ T   KM    D
Sbjct: 319 ILEFLQEYKLDKVGVFKYSREEDTPASKMDGQID 352


>gi|170764245|ref|ZP_02639239.2| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|170714882|gb|EDT27064.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
          Length = 559

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 23/202 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  + R           + +A         DLI  LP + +  ++       +   D
Sbjct: 287 NEVLHNINRYITYENIKEKVLKVASGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRPD 346

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L + KG+   +  +  
Sbjct: 347 EIQLGFLKLLKGSSMREEAEKW 368


>gi|326800449|ref|YP_004318268.1| MiaB-like tRNA modifying enzyme [Sphingobacterium sp. 21]
 gi|326551213|gb|ADZ79598.1| MiaB-like tRNA modifying enzyme [Sphingobacterium sp. 21]
          Length = 439

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C Y C F +        +   I+S + + + +   +G + I       G   + + Q   
Sbjct: 152 CDYSCTFCTIPLARGASRSGTIESLVKQAKDIAA-SGVKEIVLTGVNIGDFGMRQGQRED 210

Query: 91  LILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRF 147
             LD +     V   +        P+ +           K  V    + +QS   + L  
Sbjct: 211 RFLDLVKALDAVDGIDRFRISSIEPNLLSNEIIDFVASSKRFVPHFHMPLQSGSNKILGL 270

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +        +   +++ P   +  D+I   P +T   +    +      + +L ++
Sbjct: 271 MRRRYKRELYAERVKRIKSLMPDCCIGVDVIVGFPGETREDFLQTYEFLNDLDISYLHVF 330

Query: 206 QLTIEKGTLFYKM 218
             +  + T+  +M
Sbjct: 331 TYSERENTIASQM 343


>gi|325295239|ref|YP_004281753.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065687|gb|ADY73694.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 437

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 13/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +  +  G+E  ++  L  ++ +++L   R +  +   G        +
Sbjct: 155 CNRFCSYC-----IVPFTRGRERSVKPEL-VLKEVKRL-AERGVKEVHLLGQNVDFYNYE 207

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            I  + D +     V     I     +P        +  +        + L  QS   + 
Sbjct: 208 GID-LADLLYMVSEVEGIERIRFTTSHPCGFNRKIVEAMKNIEKVCPYVHLPPQSGSTKI 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   E    + + +   P+++   D I   P +T   +E  L    +   D  
Sbjct: 267 LERMNRGYTREEYTEKVMMLKEEIPKVALSGDFIVGFPGETTKDFEETLSLVETCVFDQG 326

Query: 203 SLYQLTIEKGT 213
            +++ +    T
Sbjct: 327 FVFEYSPRPFT 337


>gi|291563521|emb|CBL42337.1| SSU ribosomal protein S12P methylthiotransferase
           [butyrate-producing bacterium SS3/4]
          Length = 445

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 81/248 (32%), Gaps = 17/248 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K+C YC     +  Y  G+  +    + ++    +    + +  +       +L    
Sbjct: 154 CDKRCTYC-----IIPYLRGK--YRSVPMEQLVREAEELAEKGVKELILVAQETTLYGKD 206

Query: 88  NI--ALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
                 + + + +   VS    I ++   P  +     +  +  +   N + + +Q   +
Sbjct: 207 LYGEKKLPELLRRLAAVSGIQWIRLQYCYPEEITDELIETIKTEEKVCNYLDIPIQHASD 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR  N  E    I   R   P ++    LI   P +     E+ +Q       D
Sbjct: 267 AVLKRMGRRTNNKEIRGLIAKLRKEIPDIALRTTLISGFPGEMEEDHEILMQFVDDMEFD 326

Query: 201 HLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            L ++  + E+ T    F     +       + +      +    + A      E+    
Sbjct: 327 RLGVFAYSPEEDTPAFSFENQVPEEVKQERLDEIMELQQEIAFEKSEAMKGRTLEVMIEG 386

Query: 258 FLGAESLH 265
            +  E+ +
Sbjct: 387 KVADENAY 394


>gi|262039459|ref|ZP_06012763.1| protein YqeV [Leptotrichia goodfellowii F0264]
 gi|261746526|gb|EEY34061.1| protein YqeV [Leptotrichia goodfellowii F0264]
          Length = 453

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 72/194 (37%), Gaps = 16/194 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C K C YC          + +    +  L E+ ++ +      + +   +   G     +
Sbjct: 168 CSKFCSYC---KIPYARGLSRSRATEHVLEEINYLGEQGYKEVVLTGINMSEYGLD---L 221

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           EP+ +   +L+ I    +V           P ++        +     +  + + VQ+L+
Sbjct: 222 EPKTDFDTLLEKILAVKSVERVR--VSSVYPDTITDKFLGMLKNNPKLMPHLHVSVQTLD 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + RN+ A   +  +   +   P ++   D+I   P++    +   ++   S   
Sbjct: 280 DKILRLMRRNYKAEFVVNTLEKVKREVPEVALTADIIVGFPQEEEENFANTMKNLDSLGF 339

Query: 200 DHLSLYQLTIEKGT 213
             L ++  +  + T
Sbjct: 340 ADLHVFPYSDREKT 353


>gi|229829112|ref|ZP_04455181.1| hypothetical protein GCWU000342_01197 [Shuttleworthia satelles DSM
           14600]
 gi|229792275|gb|EEP28389.1| hypothetical protein GCWU000342_01197 [Shuttleworthia satelles DSM
           14600]
          Length = 449

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     + + +    +     +  ++  R+L   + +  +       +L    
Sbjct: 157 CDKHCSYC----IIPKLRGSYRSV--PMIKLIKEARELV-SQGVRELILVAQETTLYGSD 209

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +LD +     +       + A P  ++    Q   +    ++ I + +Q  
Sbjct: 210 LYGRKMLPELLDKLNDIEGLRWIR--ILYAYPEEIDQELIQAMVRNDKVLHYIDMPIQHG 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           +++ LR +GR  N  +    + + R   P ++    +I   P +T    +  L       
Sbjct: 268 DDEILRRMGRRTNQDDIRKKVAMLREAMPDIAIRTTVICGFPGETDQMHQNLLDFIDEMQ 327

Query: 199 VDHLSLYQLTIEKGTL 214
            D L  +  + E+ T 
Sbjct: 328 FDRLGAFAYSQEEDTP 343


>gi|218128607|ref|ZP_03457411.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
 gi|317475589|ref|ZP_07934851.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
 gi|217989209|gb|EEC55523.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
 gi|316908293|gb|EFV29985.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
          Length = 443

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   + S + + +      G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGSVASLVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIE--PNLLTDEIIEFVSRSKRFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETEEYFEQAYRFIQGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|171464142|ref|YP_001798255.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|229890593|sp|B1XS06|MIAB_POLNS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|171193680|gb|ACB44641.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 448

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 74/217 (34%), Gaps = 20/217 (9%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
             YV     C K C YC     V  Y  G+E   +SF   +  +  L        +  G 
Sbjct: 147 SAYVSIMEGCSKYCSYC-----VVPYTRGEEVS-RSFDDVLTEVAGLASKGVKEIVLLGQ 200

Query: 79  GTPSLI-------EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
              + +       E  + AL+++ I +   V      T  ++P          Y K    
Sbjct: 201 NVNAYLGKMGDRQEIADFALLIEYIVEIPGVERIRFTT--SHPKEFTQRLIDVYTKVPKL 258

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQW 187
           V+ + L VQ   +  L  + R + A E  + I    A      +S D I   P +T   +
Sbjct: 259 VSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAVRPDLTLSSDFIVGFPGETEADF 318

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           E  L+       D+   +  +   GT    +H D   
Sbjct: 319 EKLLKMVEELNFDNSFCFIFSPRPGTPAANLHDDTPY 355


>gi|15669058|ref|NP_247862.1| hypothetical protein MJ_0867 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2501543|sp|Q58277|Y867_METJA RecName: Full=Putative methylthiotransferase MJ0867
 gi|1591550|gb|AAB98872.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 427

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 3/103 (2%)

Query: 119 VNNFQGYRKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DL 175
               + Y+   V + + L +QS +++ L+ + R +   E    ++  R     + F  D+
Sbjct: 243 DELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDI 302

Query: 176 IYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           I   P +T  Q++  L+       D++   + +  KGT   KM
Sbjct: 303 IVGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTEAAKM 345


>gi|116748163|ref|YP_844850.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697227|gb|ABK16415.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 292

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 78/224 (34%), Gaps = 14/224 (6%)

Query: 29  VKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
             KC +C   ++   R+++  +  I +   ++++         +  +F   G   +I   
Sbjct: 30  HNKCTFCG--TYKGERFRIKDDATIDA---DIRYAA--GNLSFLHRVFLVDGDALIIPQD 82

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-SVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  I+  I +       V +   A              R+ G+  +  G++S +EQ LR
Sbjct: 83  RLVRIMRRIREEMPWIRRVGLYGNAKSILRKTPEQLAELRELGLGIVYQGLESGDEQVLR 142

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSL 204
            + +  +    I +    R    ++S   I  L    +++       +   +   +++ +
Sbjct: 143 EINKGVSLDRMIQSARRVREAGIKLSVMAILGLAGRERSLVHARATGEALTAMDPNYVGV 202

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             L +   T  Y   + G+  L S    +      + I     +
Sbjct: 203 LTLMVLPNTELYARIQRGEFELLSSREML---EELREILRHTTM 243


>gi|301166049|emb|CBW25623.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 460

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 75/231 (32%), Gaps = 17/231 (7%)

Query: 28  CVKKCPYCDF-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CV KC +C   N  V          +  F         +   R + S+  G     L+  
Sbjct: 225 CVAKCTFCSETNYWVSFRTKSARQIVDEFKYHYDNYG-VNQFRIVDSLMNGNHR--LL-- 279

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +++  I+      +       I+     + +     +  R AG   I+ G++S  +  L 
Sbjct: 280 EDMCDIILEEKHTFYWHGFCRIS-----NKLTPALLKKMRDAGCTYINYGIESGSQNVLN 334

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY- 205
            + + +  SE +  +   +N    +   ++   P +T   +   L+           +Y 
Sbjct: 335 LMKKRYKLSEILETVKHTKNSNIEVHAQILIGFPGETWFNFYETLRMLKILRGYFTRIYP 394

Query: 206 --QLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAHGLHAY 251
              L++ + T  Y    + ++ L S             T  +     L  Y
Sbjct: 395 GIPLSVTRQTYLYDNLDEYNVKLGSGEKWRTKNFSNTYTIRLIRHWILKKY 445


>gi|291525036|emb|CBK90623.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale DSM 17629]
          Length = 434

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   R +V    F        +          ++ I          E
Sbjct: 153 CNQFCSYC----IIPYARGRVRSRRFENVIAEVERLAANGFKEVVLTGIHLSSYGVDFEE 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +     +      ++E  P  V  +      K         L +QS  ++
Sbjct: 209 ATGLLELIQAVNAVKGIERIRLGSLE--PKIVTEHFASELSKLDKICPHFHLSLQSGCDE 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R +   E      L R  F    ++ D+I   P +T  ++E             
Sbjct: 267 TLKRMNRKYTTKEYERGCELLRKYFVHPAITTDVIVGFPGETEEEFEQTKAYLEHIHFYE 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ +  KGT    M    D
Sbjct: 327 MHIFKYSKRKGTRAAVMPDQID 348


>gi|153806285|ref|ZP_01958953.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
 gi|149130962|gb|EDM22168.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
          Length = 436

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 10/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C +KC YC       R+     E  +   +  +              + + G    L + 
Sbjct: 146 CDRKCSYCAIPIITGRHISKPIEEILDE-VRYLVSQGVKEFQVIAQELTYYGVD--LYKK 202

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q +  +++ I++   V         A P+   ++ F+  R+ G     + + +Q + +  
Sbjct: 203 QMLPELIERISEIPGVEWIRLHY--AYPAHFPIDLFRVMRERGNVCKYMDIALQHISDNM 260

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R     +    I   R   P +     L+   P +T   +E   +       D +
Sbjct: 261 LKLMRRQVTKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKVRFDRM 320

Query: 203 SLYQLTIEKGTL 214
             +  + E+GT 
Sbjct: 321 GAFAYSEEEGTY 332


>gi|121608687|ref|YP_996494.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Verminephrobacter eiseniae EF01-2]
 gi|229891021|sp|A1WIL9|MIAB_VEREI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|121553327|gb|ABM57476.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Verminephrobacter
           eiseniae EF01-2]
          Length = 450

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                +   L E+  +    G + ++ +      + G   S
Sbjct: 155 CSKYCSYC---VVPYTRGEEVSRPLDDVLVEVAGLADQ-GVKEVTLLGQNVNAYRGRMGS 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++AL+LD +A    V      T  ++P+       + Y +     N + L VQ  
Sbjct: 211 TAQRADLALLLDYVAGIPGVERIRYTT--SHPNEFTPRLIEAYARLPKLANHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + +    A      +S D I   P +T   ++  ++      
Sbjct: 269 SDRILMAMKRGYTAMEYKSTVRKLRAIRPDLALSSDFIVGFPGETQDDFDKLMRLIAEVH 328

Query: 199 VDHLSLYQLTIEKGTL 214
            D+   +  +   GT 
Sbjct: 329 FDNSFSFVFSPRPGTP 344


>gi|332185879|ref|ZP_08387626.1| RNA modification enzyme, MiaB family protein [Sphingomonas sp. S17]
 gi|332014237|gb|EGI56295.1| RNA modification enzyme, MiaB family protein [Sphingomonas sp. S17]
          Length = 414

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 66/208 (31%), Gaps = 21/208 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C +C     +   +    +      I+     ++   Q      +    +G   P 
Sbjct: 140 CDHACTFC----IIPTGRGPSRSVPAGLVIERIARAVELGHQEVVLTGVDLTSYGHDLPG 195

Query: 83  LIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQ 138
                 +   IL  +     +  +   +IE +      +            +  + L +Q
Sbjct: 196 QPGLGLLVERILTHVPALPRLRLSSLDSIEID------DRLFELVTGEPRVMPHLHLSLQ 249

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           +  +  L+ + R H+ ++++A +    +  P ++   DLI   P +        L     
Sbjct: 250 AGNDLILKRMKRRHSRAQSVAIVERMLSARPEIAIGADLIAGFPTEDDAMAADTLALIDD 309

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
             + H  ++  +   GT   +M +    
Sbjct: 310 CRIVHAHIFPYSARDGTPAARMPQVPHP 337


>gi|314933749|ref|ZP_07841114.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
 gi|313653899|gb|EFS17656.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
          Length = 448

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 74/233 (31%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQASQLVNSGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +     +    +   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLDEIEGLERIRISSIEAS--QLTDEVIEVIGNSNKVVRHLHVPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMEHFSERLTELHKALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHQFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D          +      L +   S       E+
Sbjct: 328 VFPYSPRIGTPAARMDDQIDESVKNERVHKLIALSDQLAKEYASKFENEVLEV 380


>gi|239908351|ref|YP_002955092.1| hypothetical protein DMR_37150 [Desulfovibrio magneticus RS-1]
 gi|239798217|dbj|BAH77206.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 359

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 66/206 (32%), Gaps = 10/206 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R        +       +   R + G    + +   G  PS     
Sbjct: 55  CANDCLYCG----IRATNANIPRYRLDDAVILDLARGMEGQGQTTIVLQSGEAPSRDGDA 110

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  +     ++  V +++   P  V    +  +R  G++R  L  ++ +      
Sbjct: 111 ALGRLVSRLKAETRLA--VTLSVGNRPREV----YAHWRDCGMDRYLLRFETSDPALFAR 164

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L  +   S+ +  +    ++  +     +  LP +T++     +       +D + L   
Sbjct: 165 LHPDCTLSQRLRCLGDLLDLGVQTGGGFMTGLPGETLSTGADNILLCRDLDLDMIGLGPY 224

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAV 233
                T   +      L      VA+
Sbjct: 225 IPHPDTPMGQSQNVHVLDPERHFVAL 250


>gi|228471870|ref|ZP_04056641.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276800|gb|EEK15503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 481

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 4/112 (3%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
           +NP  + ++      K       I L VQS   + L+ + R H   E  A I   R   P
Sbjct: 273 SNPQDMTLDVIDTMAKHHNICKYIHLPVQSGSNRILKAMNRLHTREEYFALIDGIRERIP 332

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              +S D+I   P +T    +  L        D   ++  +   GTL  +  
Sbjct: 333 ECAISQDMITGFPTETEEDHQDTLSLMEYVKYDFGFMFAYSERPGTLAARKI 384


>gi|212703826|ref|ZP_03311954.1| hypothetical protein DESPIG_01874 [Desulfovibrio piger ATCC 29098]
 gi|212672794|gb|EEB33277.1| hypothetical protein DESPIG_01874 [Desulfovibrio piger ATCC 29098]
          Length = 416

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 71/222 (31%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C  KC +C   S     +      ++      +  R L        +       S     
Sbjct: 131 CRHKCAFCTIPSIRGPLRSVPAADLR------EEARGLLAGGVRELVLVAQDLTSWGSDF 184

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSL 140
             PQ++  +LD +     ++    + +   PS V     +  R+AG   +    + +Q  
Sbjct: 185 DTPQSLPHLLDELLPLDRLTWLRLLYL--YPSGVTPEMLRYMREAGPQLLPYFDIPLQHA 242

Query: 141 EEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  +GR   ++    +  +  A      +    I   P +T   ++   +      
Sbjct: 243 HPEVLTRMGRPFANDPRRVVDRVREALPE-AALRTTFIVGYPGETEEHFQTLCRFVEETR 301

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
             HL ++    E+GT    M     + +  E  A  +    +
Sbjct: 302 FRHLGVFAYQAEEGTPAAAMPDQVPMEVREERRATLMEIQAE 343


>gi|170754665|ref|YP_001782247.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum B1
           str. Okra]
 gi|169119877|gb|ACA43713.1| putative cobalamin-dependent enzyme [Clostridium botulinum B1 str.
           Okra]
          Length = 561

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 72/222 (32%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC            + + I+    E++++      +++  I F   T +     
Sbjct: 183 CPFKCKYC----LSSTLHGVRFHDIERVKKEIKFLV----DKNVKLIKFVDRTFNC---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSL 145
           N    +        ++++     E +   +     +   K    RI    GVQ+   + L
Sbjct: 231 NHKFAMGIWKYILNMNTDAIFHFEISADLLTKEELEILSKGKEGRIQFEVGVQTTNNEVL 290

Query: 146 RFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           + + R+ N       +   +N+   +   DLI  LP +    ++       S   + + L
Sbjct: 291 KNINRHVNFETIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQL 350

Query: 205 YQLTIEKGTLFY---KMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L + KG+      +         P   +        + + 
Sbjct: 351 GFLKLLKGSSMRLESEKWGMVYSPYPPYEILSTKDISYEELL 392


>gi|289424090|ref|ZP_06425876.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
           anaerobius 653-L]
 gi|289155515|gb|EFD04194.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
           anaerobius 653-L]
          Length = 482

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     +  +  L           G    S    +
Sbjct: 194 CNNFCTYC-----IVPYTRGRERS-RKPKDIISEIEDLVKGGVREVTLLGQNVNSYGKTL 247

Query: 85  EPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E ++     D + +   +     I  + ++P  +  +     R        + L  Q   
Sbjct: 248 EEEDRISFADLLRRVNEIEGLERIRFMSSHPKDISDDVIYAMRDCKKVCEFLHLPFQVGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R+++  + +  I  A+   P    S D++   P +T    +  +        
Sbjct: 308 TSLLKKMNRHYSKEDYLNIIKKAKEEIPDLAFSTDIMIGFPGETDEDVQDTIDICEEVRF 367

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT   KM
Sbjct: 368 DTAFTFIYSKRQGTPAAKM 386


>gi|167628980|ref|YP_001679479.1| hypothetical protein HM1_1106 [Heliobacterium modesticaldum Ice1]
 gi|167591720|gb|ABZ83468.1| hypothetical protein HM1_1106 [Heliobacterium modesticaldum Ice1]
          Length = 500

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 22/252 (8%)

Query: 28  CVKKCPYC-DFN---SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC   N    +  +    +   + S L E++W + L     +   +        
Sbjct: 208 CPYVCSYCSSLNLKRIYKGKGPFVRLRSVDSTLAELRWAKGLVKNMRMVWFW----DEIF 263

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + +       G  K       +   I  +P  ++        +AG++++ +G+Q    +
Sbjct: 264 ADDEAWVREFVGRYKQEI---GLPFNIWGHPHKIKAKTMAMLVEAGLHQVVVGIQHGSPR 320

Query: 144 SLRFL-GRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY-AVD 200
             + +  R     E I     LA    P + +DLI   P +T+   EM  +  +      
Sbjct: 321 IRKEIYYRPETDEELIEMSRILAEAKVPEVIYDLILDSPFETVEDLEMTYRLCMKLHKPF 380

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L+L+ L+   GT   K+  D  L L  E +        + +  +           +  G
Sbjct: 381 TLNLHGLSFLPGTDIEKLAVDKGL-LTWEELKRQQSRPIEEMYHSFSW-------WTHTG 432

Query: 261 AESLHNLNYWRY 272
           ++      YW+ 
Sbjct: 433 SKEDRERAYWKN 444


>gi|317499163|ref|ZP_07957440.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893576|gb|EFV15781.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 305

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 19/228 (8%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF S        Q          ++ + +          +F   T +   
Sbjct: 46  CIFCSEGGSGDFASSAALSVTDQ------ITAGIEMVSRKIENGK-YIAYFQAFTNTYGP 98

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEE 142
            + +  +      +  +   + + I   P  +     +   +    +   + LG+Q++ E
Sbjct: 99  IEKLEALYMEAVNDPRI---IALAIGTRPDCLPAEVLELLNQLNKIKPVFVELGLQTIHE 155

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           ++  F+ R +  S    A+     I       LI  LP +T       ++      +  +
Sbjct: 156 ETASFIRRGYPLSCFDEAVMNLHKIGVLTVVHLILGLPGETDDMMFESVRYLNHLPIHGV 215

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               L I K T     +++    + +    VDL        S   +  
Sbjct: 216 KFSMLHILKNTDLADHYEEHPFDVFTLESYVDLILKCIENLSPEIVIH 263


>gi|257064369|ref|YP_003144041.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256792022|gb|ACV22692.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 332

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 18/195 (9%)

Query: 30  KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIEPQ 87
            +C +CDF           E ++ S   E+    Q+  P +     +F  G  P  +   
Sbjct: 66  HRCKFCDF--------ANDERYVFSL-PEIAAKAQMLIPYAQDKHRVFLLGENPLSLPMD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +  I + IA         EI + A    V        +    AG+  + +G++S  ++ 
Sbjct: 117 MLRQIFEIIAYFMPWVD--EIAMYARFDDVLAKTEEELEELADAGLREVHIGLESGAQEI 174

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM--ELQRALSYAVDHL 202
           L F+ +     +A+ A      +    SF +I  L    +T       +    +     +
Sbjct: 175 LDFMCKGIKIDDALEACRRLHKLDIDFSFTMIAGLGGTELTHLHAPGSIAFLNAAQPKRI 234

Query: 203 SLYQLTIEKGTLFYK 217
            +  L +   T  +K
Sbjct: 235 WVTGLLLWPNTPLFK 249


>gi|74003946|ref|XP_849433.1| PREDICTED: similar to CDK5 regulatory subunit associated protein
           1-like 1 isoform 3 [Canis familiaris]
          Length = 578

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PALLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATDIICGFPGETDQDFQETVKLVEDYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
              L + Q     GT   KM +
Sbjct: 385 FPSLFINQFYPRPGTPAAKMVQ 406


>gi|268679076|ref|YP_003303507.1| MiaB-like tRNA modifying enzyme YliG [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617107|gb|ACZ11472.1| MiaB-like tRNA modifying enzyme YliG [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 436

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 79/205 (38%), Gaps = 19/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C + C +C       +         ++  + ++ ++ L         F    + S +   
Sbjct: 145 CNQACSFCAIPGFKGKLHS------RTLESLIKEVKALVSKGFYDFSFISQDSSSYLRDM 198

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
            E + +  ++D + K   + S   + +   P++      +    + +  N   + +Q + 
Sbjct: 199 GEKEGLIKLIDAVEKIEGIKSARILYL--YPTTTSNALIERIIASPLCHNYFDMPIQHIS 256

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R       +  + +   A N F R S   I   P+++  ++E  L  A  + 
Sbjct: 257 DTMLKRMKRGAGRERIMEQLEMMRKAPNSFIRTS--FIVGHPEESDAEFEELLSFAKRFD 314

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D ++++  + E+ T  Y+MH   D
Sbjct: 315 FDRVNIFAYSDEEDTSAYEMHGKID 339


>gi|302385311|ref|YP_003821133.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1]
 gi|302195939|gb|ADL03510.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1]
          Length = 454

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 14/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +  Y  G+    +     ++ +++LT       +F G    S     
Sbjct: 170 CNQFCSYC-----IIPYTRGRVRS-RKPDEVVEEVKRLTASGYQEIVFTGIHLSSYGMDF 223

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +    +LD + +   V     I +    P  V         +         L +QS  
Sbjct: 224 PEKERLTLLDLVKRVHEVEGLKRIRLGSLEPRIVTEKFAAELARLSKICPHFHLSLQSGC 283

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + +L+ + R++   E      + R+ F    ++ D+I   P +   +++   +       
Sbjct: 284 DDTLKRMNRHYTTEEYFNCCDVLRSAFHNPAITTDVIVGFPGERPEEFKTTREYLEKVQF 343

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
             + +++ +   GT    M   
Sbjct: 344 YEMHVFKYSKRNGTKAAVMPDQ 365


>gi|260885970|ref|ZP_05736252.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella tannerae ATCC
           51259]
 gi|260851116|gb|EEX70985.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella tannerae ATCC
           51259]
          Length = 458

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 26/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C   C YC     +  Y  G+E       + ++ +  L           G    S     
Sbjct: 172 CNNFCHYC-----IVPYTRGRERSRD-VESILREVADLHDKHFKEVTLLGQNVNSYCWQA 225

Query: 85  ----EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               E  N   +L  +A+ +       +T   +P  +         +       I L VQ
Sbjct: 226 DEQSEAVNFPGLLRRVARAFPDMRIRFVT--PHPKDMSDETLHVIAEEPNVCRHIHLPVQ 283

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R +     +  +   R I P   +S D+      +T    +  L     
Sbjct: 284 SGSNRILKLMNRKYTREWYLDRVAAIRRIVPECGLSTDIFVGYCSETPEDHQESLSLMEE 343

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              D   +++ +   GT   K        LP +          + + +     + E
Sbjct: 344 VGYDSAFMFKYSERPGTYASK-------HLPDDISEAVKVERLEELIALQNRKSAE 392


>gi|255691410|ref|ZP_05415085.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
 gi|260623056|gb|EEX45927.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
          Length = 439

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 TFFDLVQALDQIEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETAEFFEQAYRFISGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|307153815|ref|YP_003889199.1| LuxR family two component transcriptional regulator [Cyanothece sp.
           PCC 7822]
 gi|306984043|gb|ADN15924.1| two component transcriptional regulator, LuxR family [Cyanothece
           sp. PCC 7822]
          Length = 744

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 85/252 (33%), Gaps = 20/252 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C      R+Y+       ++F+ E+++   L    ++         P++ +P+
Sbjct: 204 CPFRCRFCSQWKFWRKYRSRTP---KNFVDEIEY---LVKEHNVGFFILADEEPTITKPR 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +AL  + I +   V   +   +       +      YR+AG+  +SLG ++  + +L  
Sbjct: 258 FVALCKELIERKLNVHWGINTRVTDILR--DEKELPLYRQAGLVHVSLGTEAAAQLNLNV 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     +   A+ L R          I  L  +T+   E   + A  +  D  +    
Sbjct: 316 FRKETTIEDNKRAVRLLRENGIVAEVQYIMGLENETLETIEETYRMARDWKADMTNWNMF 375

Query: 208 TIEKGTLFY-----KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           T    +  +     K+              +   N+T+       LH Y           
Sbjct: 376 TPWPFSELFEDVGDKVEVRDYSHYNFVTPIMKPDNITREQLLKGVLHNYARFYLWKT--- 432

Query: 263 SLHNLNYWRYGD 274
               L YW   D
Sbjct: 433 ----LEYWFEKD 440


>gi|190571036|ref|YP_001975394.1| trna-i(6)a37 thiotransferase enzyme [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|229891026|sp|B3CLG9|MIAB_WOLPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|190357308|emb|CAQ54737.1| trna-i(6)a37 thiotransferase enzyme [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
          Length = 440

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-----GGTPS 82
           C K C +C     V  Y  G E + +      +    L    +      G          
Sbjct: 157 CDKFCTFC-----VVPYTRGAE-YSRPVNEIFREALNLVKNGAKEITLLGQNVNAYHGEC 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  ++  ++  IAK   +      T  ++P  +  + +  + +    +  + L VQS 
Sbjct: 211 EGEVWDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLVHAEESKLMPFVHLPVQSG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R H A E +  I   R + P +  S D I   P +T   +E  ++      
Sbjct: 269 SNKILHAMNRKHTAEEYLGIIDRLRKLKPEIEFSSDFIVGFPGETEKDFEETMKLVEKVK 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                 ++ +   GT   +        + +E +      +++     + 
Sbjct: 329 YAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQELISKQQLEFNQ 377


>gi|160903280|ref|YP_001568861.1| RNA modification protein [Petrotoga mobilis SJ95]
 gi|229890590|sp|A9BGV7|MIAB_PETMO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|160360924|gb|ABX32538.1| RNA modification enzyme, MiaB family [Petrotoga mobilis SJ95]
          Length = 439

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 4/147 (2%)

Query: 110 IEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + + PS +  +  Q     +   N   L  QS   + L+ + R +   E I  ++  +  
Sbjct: 232 LTSYPSDITDSLIQTVANEEKAANYFHLPAQSGSNKILKAMNRKYTREEFIELVNKVKKE 291

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
              ++   D I   P +T   +E  +        + +++ + +  +GT+ YK   D    
Sbjct: 292 VANVTVSSDFITGFPSETDEDFEETVDLIKQCRFERINIAEYSPREGTIAYKYQNDDVPK 351

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYE 252
                    L  L + I         E
Sbjct: 352 HIKNKRLQYLMELQKRINLEENEKYLE 378


>gi|303233275|ref|ZP_07319947.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
           PB189-T1-4]
 gi|302480665|gb|EFL43753.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
           PB189-T1-4]
          Length = 532

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 16/203 (7%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPS 82
           C + C +C        +  R        +   +   +  +  +     I    F      
Sbjct: 228 CSRMCAFCAIPHIRGPYASRPPQDILAEVDMLVDAGIHEIILIGQDTGIWGCDFK----- 282

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             EP+ +A +L  +A +          +   P  +        R     +  I + +Q  
Sbjct: 283 --EPKTLAWLLQQVAHHVRGKQCWIRVLYLQPEGMTPELISTIRDTPEVLPYIDIPIQHC 340

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL--IYALPKQTMTQWEMELQRALSYA 198
            EQ L+ +GR  +A E        R   P M      +   P +T  + +  +    +  
Sbjct: 341 SEQVLKRMGRTGSAQELHELFATLRREIPNMVLRTTGMVGFPGETAQEADELVDFFKAEE 400

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
            D++S++  + E GT   +M   
Sbjct: 401 FDYMSVFSYSQEDGTTAARMRDQ 423


>gi|291458495|ref|ZP_06597885.1| molybdopterin converting factor, subunit 1 [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291419028|gb|EFE92747.1| molybdopterin converting factor, subunit 1 [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 501

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C   C +C +          +    ++ ++E  ++ +      +  I     T ++    
Sbjct: 226 CPCHCTFCVYP-QTMHGHRYRLRSPENVVSEFSYIAENFPD--VREIVLEDDTFTIDRRR 282

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I  +L        +         A  ++++++  +  +KAG   +  G++S  +  L
Sbjct: 283 VEAICRLLIER----GLQKRFRWLCNARVNTLDLDTMKLMKKAGCRLLIPGIESGNQGIL 338

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +    S+    I  +R     +    +   P +     E  L+ AL    D    +
Sbjct: 339 DAIKKGTTLSQVERYIEDSRKAGLLVHACYMVGNPGENRETIEETLRLALRLNTDTAQFF 398

Query: 206 QLTIEKGTLFYKM 218
            L    GT  Y++
Sbjct: 399 PLIPYPGTEVYRL 411


>gi|323486989|ref|ZP_08092303.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum
           WAL-14163]
 gi|323692033|ref|ZP_08106281.1| MiaB family RNA modification enzyme [Clostridium symbiosum
           WAL-14673]
 gi|323399701|gb|EGA92085.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum
           WAL-14163]
 gi|323503956|gb|EGB19770.1| MiaB family RNA modification enzyme [Clostridium symbiosum
           WAL-14673]
          Length = 445

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 74/248 (29%), Gaps = 21/248 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K+C YC     +   +     +    +  +         + +  +       +L    
Sbjct: 154 CNKRCTYC----IIPSLRGP---YRSVPMERLLTEAGQLAGQGVKELILVAQETTLYGTD 206

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  +A+   +           P  +     Q  ++     + + + +Q  
Sbjct: 207 LYGKKMLPELLRRLAEIPGIEWLR--VQYCYPEEITEELVQVIKEEEKVCHYLDIPIQHA 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ +GR  +  E    I   R   P +     LI   P +T    E  ++      
Sbjct: 265 SDRILKSMGRKTSREELKERIARLREEIPDIVLRTTLISGFPGETPQDHEELMEFVDEME 324

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            D L ++  + E+ T    F     +       + +     ++      +      E+  
Sbjct: 325 FDRLGVFAYSAEEDTPAASFPDQVPEEVRAERRDELMELQQDIAFEKAESMVGRILEVMI 384

Query: 256 HSFLGAES 263
              +  E+
Sbjct: 385 EGKVADEN 392


>gi|296327837|ref|ZP_06870374.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155051|gb|EFG95831.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 435

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     +  Y  G+E  +      ++ + Q     +   +  G    S     
Sbjct: 154 CNNFCTFC-----IVPYVRGRERSVP-LEEIVKDVEQYVKKGAKEIVLLGQNVNSYGKDF 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               N A +LD I K       +   +  +P     +  +   K       + L +QS  
Sbjct: 208 KNGDNFAKLLDEICKVEG--DYIVRFVSPHPRDFTDDVIEVIAKNEKISKCLHLPLQSGS 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            Q L+ + R +   + +A +   ++  P ++   D+I   P +T   +   +      + 
Sbjct: 266 SQILKKMRRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQKVSF 325

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D+  ++  +I KGT    M
Sbjct: 326 DNSYMFMYSIRKGTKAATM 344


>gi|309801462|ref|ZP_07695589.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bifidobacterium dentium
           JCVIHMP022]
 gi|308221977|gb|EFO78262.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bifidobacterium dentium
           JCVIHMP022]
          Length = 484

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 77/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 186 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRQCVDEGAKEITLLGQNVNSFGYGIG-- 240

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L    +   +          +P++   +      +    ++++   +QS
Sbjct: 241 ---DRFAFSKLLRACGEIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHFPLQS 295

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   ++  ++     
Sbjct: 296 GSDRILRAMRRSYRSAKFLDILRKIREAMPDAQISTDIIVGFPGETEEDFQETMRVVEEA 355

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  +  +   GT   +M       +    E +      +T+           E+
Sbjct: 356 RFSSAFTFIYSPRPGTPAAEMEQVPHDVVQNRFERLVALQERITEENLKIFEGRDVEV 413


>gi|257066655|ref|YP_003152911.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
           20548]
 gi|256798535|gb|ACV29190.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
           20548]
          Length = 431

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 65/196 (33%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC                + S   E + + Q      + + I        L   
Sbjct: 152 CNMYCSYC---LIPYARGNIASRDMDSIKKEAKRLAQNGYKEIVLTGIHVASYGKDLRNG 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
            ++  +++ ++K   +      ++E  P  +  +  +  +  +   +   L +QS  ++ 
Sbjct: 209 TSLIDVIEEVSKTDGIERIRLSSME--PRHITRDFLERMKATEKACDHFHLSLQSGSDEI 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++       + L R +FP      D+I   P +T    E              
Sbjct: 267 LKAMNRKYDTKIFKEKVDLIREVFPNAGLTTDIIVGFPTETEKNHEETKDFVKEIKFAKT 326

Query: 203 SLYQLTIEKGTLFYKM 218
            L++ +   GT    M
Sbjct: 327 HLFKYSKRDGTKAASM 342


>gi|182420491|ref|ZP_02642555.2| radical SAM domain protein [Clostridium perfringens NCTC 8239]
 gi|182380964|gb|EDT78443.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
          Length = 559

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 23/202 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--VGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSL 83
           C  KC YC   S V      +  E   +     M+   +L     R+ +           
Sbjct: 183 CPFKCKYC--LSSVMHGVRFLDVERVKKELKYFMERGLKLVKFVDRTFNC---------- 230

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLE 141
              +    +L  +++     +      E     +     +    A   R  L  GVQ+  
Sbjct: 231 -NREYTVELLKYLSEQ---DTETRFHFEVAADLLTEEQIEILNNAPKGRFQLEVGVQTTN 286

Query: 142 EQSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            + L  + R           + +A         DLI  LP + +  ++       +   D
Sbjct: 287 NEVLHNINRYITYENIKEKVLKVASGKNVMQHLDLIAGLPGEDLESFKKSFNDVHAIRPD 346

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L + KG+   +  +  
Sbjct: 347 EIQLGFLKLLKGSSMREEAEKW 368


>gi|168183660|ref|ZP_02618324.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|237797040|ref|YP_002864592.1| biotin synthase [Clostridium botulinum Ba4 str. 657]
 gi|182673219|gb|EDT85180.1| radical SAM domain protein [Clostridium botulinum Bf]
 gi|229262071|gb|ACQ53104.1| radical SAM domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 348

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 16/195 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF---GGGTPSL 83
           +C   C YC     +       E +    L++ + ++  +   S+    F   GG  P  
Sbjct: 61  YCKNSCLYCG----ISCRNNNAERYR---LSKEEILKCCSKGYSLGYRTFVLQGGEDP-Y 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I K +      +  I  +        ++ +  AG +R  L  ++  + 
Sbjct: 113 YTDDKIINIVKSIKKLFP-----DCAITLSIGEKSYETYRKFYDAGADRYLLRHETASKN 167

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L  + +     + +   + I  ++    +  LP QT   +  +L          + 
Sbjct: 168 LYEKLHPDMSFENRRSCLENLKKIGYQVGAGFMIGLPNQTNEDYVNDLIFLKELKPHMVG 227

Query: 204 LYQLTIEKGTLFYKM 218
           +      K T+    
Sbjct: 228 IGPFIPHKNTILKNQ 242


>gi|313905328|ref|ZP_07838694.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6]
 gi|313469798|gb|EFR65134.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6]
          Length = 437

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 66/187 (35%), Gaps = 14/187 (7%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   R +V        +    +          ++ I        L E
Sbjct: 156 CNQFCTYC----IIPYARGRVRSRKIADVYEEVKRLAASGVKEVVVTGIHVCSYGKDLGE 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +++  ++  + +   +      ++E  P S+  +  +   +         L +QS  ++
Sbjct: 212 GEDLLALIRAVNEVEGIERIRLGSLE--PGSISEDFIKALSEMPKVCPHFHLSLQSGCDR 269

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEM--ELQRALSYAV 199
           +L+ + R+++ ++        R  +    +  D+I   P ++   +    +   A+ +  
Sbjct: 270 TLKRMNRHYSTADFTEVADWIRKYYEHPALCTDVITGFPGESEADFAECRDFVEAVHFFE 329

Query: 200 DHLSLYQ 206
            H+  Y 
Sbjct: 330 THVFPYS 336


>gi|313238118|emb|CBY13216.1| unnamed protein product [Oikopleura dioica]
          Length = 425

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 73/253 (28%), Gaps = 20/253 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           +Y+  +         +    YV     C   C +C      +     +    +S   E++
Sbjct: 122 QYVPDFSTPRIRLTPDHFA-YVKIAEGCNHTCTFC---IIPKIRGQHRSRTQESVFKEVE 177

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQNI--ALILDGIAKNWTVSSNVEITI-EANPSSV 117
            + +      +  I       +           +   + +  T+  +  + +   +P+  
Sbjct: 178 ALVKSG----VKEINLISQDTTYFGMDQWEGNSLCTLLRQINTIEGDFWVRLLYTHPAHW 233

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD- 174
                +   +       + + +Q + +  L  + R  +       +   R   P +    
Sbjct: 234 SDELIETIAECDKVAKYVDIPLQHISDHMLSAMKRVTSGDYIRDLLRRMRAGIPGLGIRT 293

Query: 175 -LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             I   P +T   +   L+    +  +   ++Q + E+GT  YKM    D  L       
Sbjct: 294 TFIVGFPGETEEDFNELLEFIREFRFERAGVFQYSKEEGTRAYKM----DGQLHHATRKS 349

Query: 234 DLYNLTQSITSAH 246
                   +    
Sbjct: 350 RWSRAMAELQKIA 362


>gi|78224396|ref|YP_386143.1| hypothetical protein Gmet_3205 [Geobacter metallireducens GS-15]
 gi|123729170|sp|Q39QQ6|RIMO_GEOMG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|78195651|gb|ABB33418.1| SSU ribosomal protein S12P methylthiotransferase [Geobacter
           metallireducens GS-15]
          Length = 445

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 24/233 (10%)

Query: 1   MKYLSA----YENNMTGQGSNS-LGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
           ++Y+S     ++ ++    S+     Y+     C   C YC            +   + +
Sbjct: 124 LRYISDPNYIFDESLPRLKSSPAYTAYLKIAEGCSNCCSYC---VIPSLRGALRSRPLDN 180

Query: 55  FLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            L E + +   TG R I+ I      +G   P     + +   L  I     +       
Sbjct: 181 LLMEARTLVA-TGTREINLIAQDITAWGRDLPGSPTLEELVRELAKIVGLRWIR-----L 234

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + A P  +     +  +        + + +Q + +  L+ + R     +  A I   R  
Sbjct: 235 LYAYPDGITDGLIEIIKTEPKVCKYLDIPIQHISDPVLKRMNRRSTEPQIRALIAKIRAE 294

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P ++    LI   P +T   +   L        D L ++  + E+GT    M
Sbjct: 295 IPEIALRTSLIVGFPGETEEDFRTLLHYVEETQFDRLGVFCYSREEGTPAAGM 347


>gi|187251522|ref|YP_001876004.1| MiaB family RNA modification enzyme [Elusimicrobium minutum Pei191]
 gi|186971682|gb|ACC98667.1| RNA modification enzyme, MiaB family [Elusimicrobium minutum
           Pei191]
          Length = 410

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 2/111 (1%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           +  +P+ +         K       I L VQS  ++ L+ + R +++   I  I   +  
Sbjct: 219 MSPHPAFITPKLIDTIAKNDKIAKHIHLPVQSGSDKILKEMKRGYDSKTVIEKISRLKEN 278

Query: 168 FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              +S D+I   P +T   +E  L+     A      ++ +  + T  Y +
Sbjct: 279 GVLVSTDIIVGYPTETEEDFERTLELVDKCAFSFAYCFKFSPRRNTPAYSL 329


>gi|156938206|ref|YP_001436002.1| RNA modification protein [Ignicoccus hospitalis KIN4/I]
 gi|156567190|gb|ABU82595.1| RNA modification enzyme, MiaB family [Ignicoccus hospitalis KIN4/I]
          Length = 423

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 14/208 (6%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            P    C+  C +C   + V R ++     ++ I+  L  ++   +     +     +G 
Sbjct: 135 IPIADGCLGNCTFC--ITKVARPRLVSQRPDSIIEYALKGVKRGAKEIWLTAPDVAAYGK 192

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGV 137
                + P  +  +L  + +N  V   +          V        R   V     L +
Sbjct: 193 EIGLEL-PDLLEKLLKVLPENVYVRVGMMSPDTF--REVMDRTIDVMRDPRVFKFFHLPL 249

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ LR +GR +  SE +  ++  R  F    ++ D++   P +    +E+ L+   
Sbjct: 250 QSASDKVLRLMGRRYTYSEFVEIVNKVRKAFNDPTIATDVMVGFPGEEEDDFELTLKALR 309

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             A + + L   T    TL  +M +  +
Sbjct: 310 ELAFERVHLAAYTPRPLTLGARMPQVRE 337


>gi|117928695|ref|YP_873246.1| RNA modification protein [Acidothermus cellulolyticus 11B]
 gi|229890412|sp|A0LV00|MIAB_ACIC1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|117649158|gb|ABK53260.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidothermus
           cellulolyticus 11B]
          Length = 497

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 71/228 (31%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  + +  +     ++ ++ L     +     G    S     
Sbjct: 179 CNNTCTFC----IVPSLRGRERD--RRPGDILREIQTLVADGVLEVTLLGQNVNSYGVDF 232

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   A +L        +          +P     +      +    + ++ + +QS  
Sbjct: 233 GDRQAFAKLLRACGTIDGLERVRF--TSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGS 290

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR + R++   + +  I   R+  P   ++ D+I   P +T   +   L        
Sbjct: 291 DAVLRRMRRSYRKEKYLDIISRVRSAIPDAAITTDIIVGFPGETEDDFAETLDVVRKARF 350

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
                +Q +   GT   +M       + ++  A  +  + Q     + 
Sbjct: 351 AGAFTFQYSKRPGTPAAEMPDQVPPDVVADRFARLVALVEQIALEENQ 398


>gi|306822499|ref|ZP_07455877.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bifidobacterium dentium
           ATCC 27679]
 gi|304554044|gb|EFM41953.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bifidobacterium dentium
           ATCC 27679]
          Length = 503

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 77/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 205 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRQCVDEGAKEITLLGQNVNSFGYGIG-- 259

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L    +   +          +P++   +      +    ++++   +QS
Sbjct: 260 ---DRFAFSKLLRACGEIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHFPLQS 314

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   ++  ++     
Sbjct: 315 GSDRILRAMRRSYRSAKFLDILRKIREAMPDAQISTDIIVGFPGETEEDFQETMRVVEEA 374

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  +  +   GT   +M       +    E +      +T+           E+
Sbjct: 375 RFSSAFTFIYSPRPGTPAAEMEQVPHDVVQNRFERLVALQERITEENLKIFEGRDVEV 432


>gi|108804264|ref|YP_644201.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rubrobacter xylanophilus
           DSM 9941]
 gi|108765507|gb|ABG04389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rubrobacter xylanophilus
           DSM 9941]
          Length = 445

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 25/201 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     V R +       +     ++ +R+L    +      G         Q
Sbjct: 170 CNYRCSYC----VVPRVRGRMV--CRPLENVLEEVRRLVRSGTNYITLLG---------Q 214

Query: 88  NIALILDGIAKNWTVSSNVE------ITIEANPSSVEVNNFQGY--RKAGVNRISLGVQS 139
            +        +   +   V           ++PS++E    +    R   V ++ L VQS
Sbjct: 215 TVDAWRHERRRFCDLLEAVAEEAPRVWFTTSHPSNMEDRTLRAIGERDTIVKKLHLPVQS 274

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R + A      I + R   P   +S D+I   P +T    E  L+     
Sbjct: 275 GSDRMLKMMHRGYGADRYRRKIEVFREHVPDGTLSTDIIVGHPGETEEDHEATLRLIEDC 334

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D   +++ +  +GT   +M
Sbjct: 335 QFDSAYIFKFSPRRGTEAAQM 355


>gi|330835295|ref|YP_004410023.1| RNA modification protein [Metallosphaera cuprina Ar-4]
 gi|329567434|gb|AEB95539.1| RNA modification protein [Metallosphaera cuprina Ar-4]
          Length = 418

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 5/121 (4%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
             + VQS  ++ LR + R +   E  A +   R  F  ++   D+I   P +  + +E  
Sbjct: 245 FHIPVQSGNDKVLREMNRKYTVDEFRAIVKEIRKKFRLVNITTDIIVGHPGEDDSAFEDT 304

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L        + + +   +I   T   +      +  P +   +          S      
Sbjct: 305 LNLMKELRFERIHIAMYSIRPNT---RSSMLAQVPGPIKKERLKRAVSLYEELSREVHKE 361

Query: 251 Y 251
           Y
Sbjct: 362 Y 362


>gi|266620829|ref|ZP_06113764.1| radical SAM protein [Clostridium hathewayi DSM 13479]
 gi|288867542|gb|EFC99840.1| radical SAM protein [Clostridium hathewayi DSM 13479]
          Length = 324

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 14/201 (6%)

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
            L  P+     +F   T +      +  +      +  ++    ++I   P  +      
Sbjct: 90  ALDCPKGRYIAYFQSYTNTYAPVSRLRALFTEAIAHPDIA---ILSIATRPDCLPPEIIA 146

Query: 124 GYRKAGVNRI-----SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYA 178
              +   NRI      LG+Q++ E++ RF+ R +  S    A +        +   +I  
Sbjct: 147 LLSEL--NRIKPVWVELGLQTIHEETARFIRRGYPLSVFEDAWNRLHGAGLTVIAHVILG 204

Query: 179 LPKQTMTQWEMELQRALSY---AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           LP +T +  +  +          +D + L  L + +GT    +++ G     S    +DL
Sbjct: 205 LPGETRSMMQDTVSYLGGLGTHGIDGVKLQLLHVLEGTDLAVLYRAGGFQTFSLEEYLDL 264

Query: 236 YNLTQSITSAHGLHAYEISNH 256
                ++     +    IS  
Sbjct: 265 VIDCIALLPPETVIH-RISGD 284


>gi|253990619|ref|YP_003041975.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782069|emb|CAQ85233.1| trna-methylthiotransferase miab protein [Photorhabdus asymbiotica]
          Length = 476

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 71/232 (30%), Gaps = 20/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K   YC F                  L E+  +    G R +     ++    G  + 
Sbjct: 159 CNK---YCTFCVVPYTRGEEVSRPCDDILFEIAQLAAQ-GVREVNLLGQNVNAYRGA-TY 213

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               +I    + +     +     I     +P     +    Y      V+ + L VQS 
Sbjct: 214 --DGDICSFAELLRLVAAIDGIDRIRFTTSHPIEFTDDIIAVYEDTPELVSFLHLPVQSG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R H A E  + I   R   P +  S D I   P +T   +E  ++      
Sbjct: 272 SDRILTLMKRAHTALEYKSIIRKLRKARPDILISSDFIIGFPGETQDDFEKTMKLIADVN 331

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            D    +  +   GT    +  D       E     LY L Q I      ++
Sbjct: 332 FDMSYSFIYSARPGTPAADLPDDVS----EEEKKQRLYLLQQRINQQAMNYS 379


>gi|313206267|ref|YP_004045444.1| miab-like tRNA modifying enzyme [Riemerella anatipestifer DSM
           15868]
 gi|312445583|gb|ADQ81938.1| MiaB-like tRNA modifying enzyme [Riemerella anatipestifer DSM
           15868]
 gi|315023051|gb|EFT36064.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Riemerella anatipestifer RA-YM]
 gi|325336291|gb|ADZ12565.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-GD]
          Length = 448

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C  KC YC   +      + + + I++ +   Q +        + + +  G  G      
Sbjct: 156 CDYKCTYC---TIPLARGISRSDTIENVIKNAQEIATKDIKEIVLTGVNIGDYGKGEFGN 212

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
            ++    LD I +   V     I I    P+ ++  + +     K  V    + +QS  +
Sbjct: 213 KKHEHTFLDLITELDKVEGIERIRISSIEPNLLKNESIELVAQSKRFVPHFHIPLQSGSD 272

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +        I   +++ P   +  D+I   P +T  ++           + 
Sbjct: 273 ELLKRMKRRYLTKLYRDRIDTIKSVMPNAAIGVDVIVGFPGETEERFLETYHFLNELPIS 332

Query: 201 HLSLYQLTIEKGT 213
           +L ++  +  + T
Sbjct: 333 YLHIFTYSERENT 345


>gi|302342478|ref|YP_003807007.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639091|gb|ADK84413.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
          Length = 530

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 4/141 (2%)

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           A   +V     +  +KAG   +S GV++   + ++ + +  +  +   A+ +        
Sbjct: 268 ARVDTVSPEVLRAMKKAGCTAVSFGVETGNPEIMKRIKKGISLDQVTKAVAMTAEAGLLP 327

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ---LTIEKGTLFYKMHKDGDLVLPS 228
               I  LP +T        + A S A +   LY    L    GT   +   +  L L +
Sbjct: 328 HASFILGLPGETPQTLRQTQEFADSLA-ELGCLYGFHLLAPFPGTEVLERIDEYGLTLLT 386

Query: 229 ENVAVDLYNLTQSITSAHGLH 249
           +N A    N     T+     
Sbjct: 387 DNWADYHANRAIVQTAQAPRE 407


>gi|225619006|ref|YP_002720232.1| biotin synthase [Brachyspira hyodysenteriae WA1]
 gi|225213825|gb|ACN82559.1| biotin synthase [Brachyspira hyodysenteriae WA1]
          Length = 373

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 63/195 (32%), Gaps = 17/195 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +  RY++ +E+ +           +L       +    GG    
Sbjct: 85  YCKNDCIYCGIRKSNKNAERYRLDKEDILSCC--------ELGYEIGFRTFVLQGGEDPY 136

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + ++ I++ I   +      +  +  +    E   ++  ++ G NR  L  ++ ++ 
Sbjct: 137 YNLEIMSDIVEAIKTKYP-----DCALTLSIGEKEEEYYKALKEKGANRFLLRHETSDDI 191

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L     +       +   + +  +    ++   P QT+     +         + +
Sbjct: 192 HYSKLHPTDMSLENRKECLRTLKKLGYQTGTGIMVGSPHQTLENIADDFVFMQEIKPEMI 251

Query: 203 SLYQLTIEKGTLFYK 217
            +      K T F  
Sbjct: 252 GIGPFLPHKDTPFAN 266


>gi|224024935|ref|ZP_03643301.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM
           18228]
 gi|224018171|gb|EEF76169.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM
           18228]
          Length = 432

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 22/242 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHVSRPMEEILDEVRLLVSQGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ +A+   V         A P++   + F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIEKMAEIPGVEWIRLHY--AYPAAFPEDLFRVMREHDNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+ + +E    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 QKMRRHVSKAETYRLIERFREEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKARFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN---HSFLG 260
            +  + E+GT   + + D                +             EIS    H+ +G
Sbjct: 322 AFAYSEEEGTYSAQNYSDD-----------IPEEVKHRRLDELMAVQQEISADLTHAKIG 370

Query: 261 AE 262
            E
Sbjct: 371 KE 372


>gi|160880431|ref|YP_001559399.1| MiaB-like tRNA modifying enzyme [Clostridium phytofermentans ISDg]
 gi|160429097|gb|ABX42660.1| MiaB-like tRNA modifying enzyme [Clostridium phytofermentans ISDg]
          Length = 466

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 66/206 (32%), Gaps = 13/206 (6%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTE----MQWMRQLTGPRSISSIFFGGG 79
           C + C YC           R +   +  +   +      +           + ++     
Sbjct: 171 CNQFCSYCIIPYARGRIRSRSEEEIKKEVMRLVENGYQEIVLTGIHLSSYGLETLSVKEQ 230

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG-VNRISLGV 137
             +L+    I+ ++  I     +     I + +  P  +     +   ++       L +
Sbjct: 231 A-ALLPENGISPLMTLILSLSEIEGLNRIRLSSLEPRIITEEFVKTLARSKLCPHFHLSL 289

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS  +++L  + R +   +      + R  +    ++ D+I   P +T  ++E       
Sbjct: 290 QSGCKETLVRMNRKYTPDDYYKRCEIIRTYYENPAITTDVIVGFPGETEEEFEDTKAFLE 349

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
                 + +++ +  KGT    M   
Sbjct: 350 KVQFSQMHIFKYSKRKGTKAEAMPNQ 375


>gi|56807822|ref|ZP_00365667.1| COG1242: Predicted Fe-S oxidoreductase [Streptococcus pyogenes M49
           591]
          Length = 273

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNT---HDTVDV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 100 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLAELSERMHVTVELGLQTTYEETSRLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKETVRRLRH-CPNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 219 LLHLMTNTRMQRDYHEGRLKL 239


>gi|171742622|ref|ZP_02918429.1| hypothetical protein BIFDEN_01735 [Bifidobacterium dentium ATCC
           27678]
 gi|283456298|ref|YP_003360862.1| tRNA 2-methylthioadenosine synthase [Bifidobacterium dentium Bd1]
 gi|171278236|gb|EDT45897.1| hypothetical protein BIFDEN_01735 [Bifidobacterium dentium ATCC
           27678]
 gi|283102932|gb|ADB10038.1| tRNA 2-methylthioadenosine synthase [Bifidobacterium dentium Bd1]
          Length = 503

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 77/238 (32%), Gaps = 22/238 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C +C             +      L E++              ++++S  +G G  
Sbjct: 205 CNNTCTFC---IVPTTRGKEHDRRPGDILAEIRQCVDEGAKEITLLGQNVNSFGYGIG-- 259

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +    + +L    +   +          +P++   +      +    ++++   +QS
Sbjct: 260 ---DRFAFSKLLRACGEIEGLERVRF--TSPHPAAFTDDVIAAMAETPNVMHQLHFPLQS 314

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R++ +++ +  +   R   P   +S D+I   P +T   ++  ++     
Sbjct: 315 GSDRILRAMRRSYRSAKFLDILRKIREAMPDAQISTDIIVGFPGETEEDFQETMRVVEEA 374

Query: 198 AVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                  +  +   GT   +M       +    E +      +T+           E+
Sbjct: 375 RFSSAFTFIYSPRPGTPAAEMEQVPHDVVQNRFERLVALQERITEENLKIFEGRDVEV 432


>gi|124514759|gb|EAY56271.1| TRNA-i(6)A37 modification enzyme (MiaB) [Leptospirillum rubarum]
          Length = 468

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 68/235 (28%), Gaps = 29/235 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVG----------QENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C K C YC       R               EN + S   E+  + Q            G
Sbjct: 180 CDKACAYC--VVPATRGAERSRPVTDIVREVENLVSSGFREITLLGQNVNGYGQKGDTAG 237

Query: 78  GGTPSLIE-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
              P L++   +I  +L                  ++P  +  +       +   +  + 
Sbjct: 238 ASFPELLQRLSDIPGLLRLRF------------TTSHPMDMSEDLIDVMATSSRVMPHLH 285

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQ 192
           L VQS  ++ L  + R ++  +    I   R   P   ++ DLI     +T   +E  L 
Sbjct: 286 LPVQSGSDRMLERMQRGYSLDDYRRWIEKLRKKVPEAALTTDLIVGFCGETEEDFEKTLA 345

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
               +  D    +  +    T  +         +  E +      + Q     + 
Sbjct: 346 AVEEFRFDGAFAFIYSPRPSTPAHSWEDVPPREMSVERLERLQKKVEQQAMERNQ 400


>gi|152984799|ref|YP_001346514.1| hypothetical protein PSPA7_1128 [Pseudomonas aeruginosa PA7]
 gi|229890606|sp|A6V0C9|MIAB_PSEA7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|150959957|gb|ABR81982.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudomonas aeruginosa
           PA7]
          Length = 446

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 67/230 (29%), Gaps = 16/230 (6%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F                  + E+  + +  G R ++ +                
Sbjct: 157 CSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAE-NGVREVTLLGQNVNGFRGQTHDGRL 215

Query: 91  LILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
                + +       +E      ++P        Q + +    V  I L VQS  ++ L 
Sbjct: 216 ADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLA 275

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + RNH   E  + I   +   P +    D I   P +T   +E  ++       D    
Sbjct: 276 AMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEEVGFDFSFS 335

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           +  +   GT    +       LP E          Q +        YEIS
Sbjct: 336 FIYSARPGTPAADLAD----DLPEEVKKRR----LQILQGRIHQQGYEIS 377


>gi|91773434|ref|YP_566126.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
           6242]
 gi|91712449|gb|ABE52376.1| Radical SAM family protein with UPF0004 domain [Methanococcoides
           burtonii DSM 6242]
          Length = 368

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 56/172 (32%), Gaps = 12/172 (6%)

Query: 28  CVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT--PSL 83
           C   C YC       R      +   I S ++  ++   L    S ++  +GG    P  
Sbjct: 150 CPWNCKYC----QTPRIFGHEMRHRSIDSIVSFAKYYNDLRFTSS-NAFAYGGNGIQPRF 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEE 142
            + + +   L  I              E  P  V         K   NR ISLG QS  +
Sbjct: 205 DKVEALLSKLSSIVGKNIFFGT--FPSEIRPEFVTHEGLDLIDKYCSNRTISLGAQSGSD 262

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
             L+ + R H + +   A+            D I+  P +     +  L++ 
Sbjct: 263 IILKEMLRGHTSEDVNIAVERCFEHEIIPVVDFIFGFPNEAEEDQQRTLEQI 314


>gi|226226860|ref|YP_002760966.1| hypothetical protein GAU_1454 [Gemmatimonas aurantiaca T-27]
 gi|226090051|dbj|BAH38496.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 451

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 73/225 (32%), Gaps = 20/225 (8%)

Query: 25  WP---FCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            P    C  +C YC   F     R +   +   +      Q + ++       + +  G 
Sbjct: 149 IPVQRGCDYRCTYCIVPFTRGPERSRKLDDVVREVQQVVEQGLSEVVLLGQTVNSYTDGT 208

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                   + A +L  +     +          +P+                   I L +
Sbjct: 209 -------HDFADLLRAVGAVDGIRRVRY--TSPHPNDFSDRVIDAMASVATVCEHIHLPM 259

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS     L+ + R ++  E +  +   R   P +S   D+I   P +T  ++E  L    
Sbjct: 260 QSGSTSMLKRMLRRYSREEYLDCVARMRAAIPGLSLTTDIIVGFPGETDAEFEDTLSLCQ 319

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               D   +++ +  +GT   +M    D  +P + +A     L +
Sbjct: 320 EVRFDDAFMFKFSPREGTPATRMPA--DWTIPDDVMAARFDRLVK 362


>gi|187251734|ref|YP_001876216.1| Radical SAM domain-containing protein [Elusimicrobium minutum
           Pei191]
 gi|186971894|gb|ACC98879.1| Radical SAM domain protein [Elusimicrobium minutum Pei191]
          Length = 346

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 57/193 (29%), Gaps = 18/193 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     +R  K   + +    ++ L      + L     +         P   
Sbjct: 60  CQNNCFYCG----IRAAKKDVKRYRLDTETTLKAAALAKNLGYKTIVLQSGEENAAP--- 112

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +   L  I +   +     + +  +        +  YR+ G +R  L +++ +E  
Sbjct: 113 ----LNEFLQIIKEIKNM----GLALTLSIGEKTYQEYLAYREVGADRFLLRIETTDENL 164

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + L    N    +  +   + +       ++  LP QT      ++        D L +
Sbjct: 165 YQTLHPGMNLQNRLRCLKDIKKLGYETGTGIMVGLPGQTAKSIAKDILFFKELDADMLGI 224

Query: 205 YQLTIEKGTLFYK 217
                  GT    
Sbjct: 225 GPFIPCPGTPLEN 237


>gi|328554278|gb|AEB24770.1| ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens TA208]
 gi|328912675|gb|AEB64271.1| ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens LL3]
          Length = 451

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 76/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L +   +   +      +IEA+   +     +    +   V  + + +QS     
Sbjct: 210 NFAKLLRELDTRVEGLKRIRISSIEAS--QITDEVIEVLDASDKIVRHLHIPIQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  +       ++ D+I   P +T  ++    +    +    L
Sbjct: 268 LKRMRRKYTMEFFADRLNKLKEALPGLAVTSDVIVGFPGETEEEFMETYRFIKEHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +     +      L +   S +     EI
Sbjct: 328 HVFPYSKRTGTPAARMEDQVDENVKNERVHKLIALSDQLAKEYASDYEGEVLEI 381


>gi|302875219|ref|YP_003843852.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307688900|ref|ZP_07631346.1| biotin synthase [Clostridium cellulovorans 743B]
 gi|302578076|gb|ADL52088.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 346

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 69/188 (36%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR     E +  S    + + ++       ++I   GG       +
Sbjct: 60  CKRNCLYCG----LRRENNNIERYRLSKEQILDFSKKAV-SYGYNTIVLQGGEDDYFTVE 114

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            ++ I+  I +        ++ I  +        ++  ++AG +R  + +++ +++    
Sbjct: 115 RLSEIIKEIKQL-------DVAITLSIGEKSYEEYKALKEAGADRYLIRIETTDKKLYED 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +    +  E    +   + +   +   ++  LP QT+  +  ++       +D + +   
Sbjct: 168 MDPGMSHDERKRCLRDLKALGYEVGSGILVGLPGQTLESYAEDILFFKEEDMDMVGIGPF 227

Query: 208 TIEKGTLF 215
              + T  
Sbjct: 228 IPNEDTPL 235


>gi|189485484|ref|YP_001956425.1| hypothetical protein TGRD_481 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|229891020|sp|B1H0D2|MIAB_UNCTG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|170287443|dbj|BAG13964.1| conserved hypothetical protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 418

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P  +  +  +           I + +QS  ++ L+ + R ++    +  I   R   P 
Sbjct: 221 HPKDLSDDLIKIMATEPKVCPHIHIPMQSASDKILKAMNRKYSYEHYLGLIKKLRTAVPD 280

Query: 171 MSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           +S   D+I   P +T   +E  L+   +     L +++ +    T   +M 
Sbjct: 281 VSVTTDIIVGFPGETDEDFEDTLKAVKTIRFGGLYVFRYSPRPDTKAAEMI 331


>gi|169824844|ref|YP_001692455.1| putative Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
 gi|167831649|dbj|BAG08565.1| putative Fe-S oxidoreductase [Finegoldia magna ATCC 29328]
          Length = 293

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 74/224 (33%), Gaps = 29/224 (12%)

Query: 28  CVKK-----CPYCD--------FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           C  +     C +C         FN +  + +V           +++ + +        + 
Sbjct: 32  CPNRKNSNGCIFCSESGSGEFTFNEYSIKDQV---------ELQIKRLSEKKKADKFIA- 81

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-- 132
           +F   T +      +  I     +N  V   + + I      ++    Q           
Sbjct: 82  YFQSFTNTYKPVNELRKIYSDAIENENV---IVLDIATRGDCLDDEKIQLLSDINKEVDV 138

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            + +G+QS ++ ++  + R ++            +   ++   +I  LP +T   +   +
Sbjct: 139 WVEMGLQSTKKSTIELINRAYSNEVYFDMAKKLMDNGIKVISHVIAGLPYETEDDFLESV 198

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            +   + +  + ++ L I+  +  Y  ++     + + +   D 
Sbjct: 199 YQTQIHDIWGIKIHSLYIQTDSRLYDYYQKNKFKILTMDEYTDW 242


>gi|94972360|ref|YP_595580.1| Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731897|emb|CAJ53940.1| Fe-S oxidoreductase [Lawsonia intracellularis PHE/MN1-00]
          Length = 487

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 20/197 (10%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC +C     F+S   R +       ++ + E +++++      +  I       ++
Sbjct: 213 CPFKCFFCLYPQVFHSRRYRPRSP-----ENIVAEFKYIKENFPD--LKEIGIEDDCFTV 265

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
              +   I  +L     N T   NV          V+       +KAG   +++G +S  
Sbjct: 266 NTARVRKICQLLIEEKLNMTWYCNV-------RGDVDYETLFLMKKAGCRLVTVGFESGV 318

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           + +L  + +N            A+     +   ++   P  ++   +   + AL    D 
Sbjct: 319 QSALDQMHKNEKIKNYYQFAKDAQKAGIMVHGCIMAGTPGDSLEVQKENYRFALKINCDS 378

Query: 202 LSLYQLTIEKGTLFYKM 218
           +  Y L +  GT  Y  
Sbjct: 379 MQFYPLYVYPGTEAYTW 395


>gi|15639741|ref|NP_219191.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025979|ref|YP_001933751.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Treponema
           pallidum subsp. pallidum SS14]
 gi|6136574|sp|O83735|MIAB_TREPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229891019|sp|B2S3Z3|MIAB_TREPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|3323060|gb|AAC65721.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018554|gb|ACD71172.1| hypothetical protein TPASS_0754 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060116|gb|ADD72851.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 456

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 21/210 (10%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C +C    +VR  ++ ++  + + L E+  + +  G R I+ +  G    
Sbjct: 156 IPIMNGCNNFCSFC-IVPYVRGREISRD--LDAILQEVDVLSE-KGVREITLL--GQNVN 209

Query: 82  SLIEPQ------NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VN 131
           S               +L  + +   V   ++    + ++P  +  +      +      
Sbjct: 210 SYRGRDREGNIVTFPQLLRHLVRRCEVKDQIKWIRFVSSHPKDLSDDLIATIAQESRLCR 269

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEM 189
            + L VQ      L+ + R++   + ++ +   +   P +  S D++   P +T   +E 
Sbjct: 270 LVHLPVQHGANGVLKRMRRSYTREQYLSLVGKLKASVPNVALSTDILIGFPGETEEDFEQ 329

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            L        D   +Y     +GT  Y   
Sbjct: 330 TLDLMREVEFDSAFMYHYNPREGTPAYDFP 359


>gi|227538855|ref|ZP_03968904.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241364|gb|EEI91379.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 478

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 82/245 (33%), Gaps = 30/245 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----------WMRQLTGPRSISSIFF 76
           C   C +C            +   + S + E Q            + Q       ++   
Sbjct: 186 CDNMCSFC---VVPFTRGRERSRDVDSIIKEAQDLFNAGYREVTLLGQNVDSYKFTAPVA 242

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRI 133
            G +P+  EP N A +L   AK   VS  + +     +P  +         +     N I
Sbjct: 243 EGESPA--EPVNFAQLL---AKVADVSPLLRVRFSTSHPKDITDEVLHTMARYENICNYI 297

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMEL 191
            L VQS   + L  + R ++ +  I  +   R I P   +S D+I     +T  + +  L
Sbjct: 298 HLPVQSGNSRVLELMNRTYDRAWYIDRVDAIRRILPECGISTDVITGFCTETEEEHQETL 357

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   D+  ++  +   GTL  K ++D           +    LT+ +        Y
Sbjct: 358 SMMDYVKYDYAYMFAYSERPGTLAAKRYED------DIPEEIKKRRLTEVVAKQRLHSHY 411

Query: 252 EISNH 256
            I N 
Sbjct: 412 RIQNF 416


>gi|110598152|ref|ZP_01386430.1| tRNA-i(6)A37 modification enzyme MiaB [Chlorobium ferrooxidans DSM
           13031]
 gi|110340284|gb|EAT58781.1| tRNA-i(6)A37 modification enzyme MiaB [Chlorobium ferrooxidans DSM
           13031]
          Length = 428

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 11/195 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     V  +  G+E    +  + +  +R++           G    S   P 
Sbjct: 142 CNNMCAYC-----VVPFTRGRERS-HTMSSVLDEVRKVAASGYREITLLGQNVNSYSAPD 195

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                   +      +  + I     +P  +  +  +   +     N I L VQS   + 
Sbjct: 196 RDMDFAGLLEAVSRQAPELRIRFTTSHPKDISESLVRTIARRPNICNHIHLPVQSGSSRV 255

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H   +    I L R++ P +S   DLI     +     ++ L+       D  
Sbjct: 256 LGLMNRGHTIEQYREKIALIRSVIPDVSLSTDLIAGFCGEDEADHQLTLKLLSDIRFDAA 315

Query: 203 SLYQLTIEKGTLFYK 217
            ++  +   GTL  +
Sbjct: 316 YMFFYSTRPGTLAAR 330


>gi|147677631|ref|YP_001211846.1| 2-methylthioadenine synthetase [Pelotomaculum thermopropionicum SI]
 gi|238066433|sp|A5D2R3|RIMO_PELTS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|146273728|dbj|BAF59477.1| 2-methylthioadenine synthetase [Pelotomaculum thermopropionicum SI]
          Length = 444

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 61/201 (30%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC            +  F    + ++    +    + +  +       +     
Sbjct: 156 CDNRCSYC-------VIPAVRGPFRSRRMEDIMSEAEELANKGVKELIIVAQDTTRYGID 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L     +  +L+G+             +   PS +  +      K+      + +  Q  
Sbjct: 209 LYGKPMLDALLEGLTGIKG--PVWLRLLYTYPSLITDDLIYLMAKSRKICRYLDIPFQHA 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R  +  EA   +   R   P +      I   P +T   ++  L       
Sbjct: 267 SNRVLQLMNRRGSKEEAARLVAKLRADIPGIVLRTTFIVGFPGETEEDFQELLDFMAEAK 326

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D   ++  + E+GT   +M 
Sbjct: 327 FDRAGVFTYSREEGTAAAEMP 347


>gi|253578849|ref|ZP_04856120.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849792|gb|EES77751.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 445

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 70/206 (33%), Gaps = 24/206 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC        F S      V Q     +  + E+  + Q T   ++      G 
Sbjct: 154 CDKHCTYCIIPKLRGKFRSVPMERLVTQAKEMAEEGVKELILVAQET---TVYGTDIYG- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                  +++ ++L  + K   +       +   P  +     Q  ++     + + L +
Sbjct: 210 ------KKSLHILLKELCKIKGIRWIR--VLYCYPEEIYDELIQTMKEEKKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+ +GR    +E +  ++  R   P +     LI   P +T    E  +    
Sbjct: 262 QHASDRILKRMGRRTTQAELVEIVNKLRREIPDIVLRTTLISGFPGETQEDHEELMSFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
               D L ++  + E+ T    M   
Sbjct: 322 EMEFDRLGVFTYSPEEDTPAATMPDQ 347


>gi|238026649|ref|YP_002910880.1| Radical SAM domain-containing protein [Burkholderia glumae BGR1]
 gi|237875843|gb|ACR28176.1| Radical SAM domain protein [Burkholderia glumae BGR1]
          Length = 480

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++    + +++ L E++W+R       +  I F   T +  +P 
Sbjct: 213 CRSKCTFCLWPQTVGGHRYRVRS-VENVLAEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 269

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +  +W+ ++   +              +  +  G+  + +G +S ++Q L
Sbjct: 270 VEEIARGLGRLGVSWSCNAKANVPYST---------LKIMKDNGLRLLLVGYESGDDQIL 320

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T       +  A       + + 
Sbjct: 321 LNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETKDTIRKTIAYAKEINPHTIQVS 380

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y+ 
Sbjct: 381 LAAPYPGTKLYEQ 393


>gi|24375413|ref|NP_719456.1| biotin synthase [Shewanella oneidensis MR-1]
 gi|24350251|gb|AAN56900.1|AE015824_11 biotin synthase family protein [Shewanella oneidensis MR-1]
 gi|301344403|gb|ADK73962.1| HydE [Shewanella oneidensis]
          Length = 359

 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 68/191 (35%), Gaps = 17/191 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N  V RY++  E  + +  +  +        +S     + G      
Sbjct: 71  CRNHCHYCGLRTENRQVTRYRLSNEEILNAVDSIAELGLGTVVLQSGDDFNYSGNR---- 126

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               I+ ++  I ++  ++      I  +    +    + +R+AG +R  L +++ +   
Sbjct: 127 ----ISTLITEIKRHHNLA------ITLSLGDRKHQELEKWREAGADRYLLKMETFDRAL 176

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
                   N  E IA ++  +++  +    +I  LP  T      ++Q      +D L+ 
Sbjct: 177 FAQCRPKANFDERIARLNYLKSLGYQTGSGIIVDLPGMTDAILARDIQHLSELQLDMLAC 236

Query: 205 YQLTIEKGTLF 215
                   T F
Sbjct: 237 GPFIAHHQTPF 247


>gi|308174331|ref|YP_003921036.1| 30S ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607195|emb|CBI43566.1| ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens DSM 7]
          Length = 451

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 76/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L +   +   +      +IEA+   +     +    +   V  + + +QS     
Sbjct: 210 NFAKLLRELDTRVEGLKRIRISSIEAS--QITDEVIEVLDASDKIVRHLHIPIQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  +       ++ D+I   P +T  ++    +    +    L
Sbjct: 268 LKRMRRKYTMEFFADRLNKLKEALPGLAVTSDVIVGFPGETEEEFMETYRFIKEHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +     +      L +   S +     EI
Sbjct: 328 HVFPYSKRTGTPAARMEDQVDENVKNERVHKLIALSDQLAKEYASDYEGEVLEI 381


>gi|78186044|ref|YP_374087.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
 gi|78165946|gb|ABB23044.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
          Length = 479

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 80/220 (36%), Gaps = 17/220 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C  N HV      ++  I+  + E+   R+  G             P     +
Sbjct: 197 CPHNCDFC--NVHVLNGHRLRQRPIEEIVGEVARFREHDGRIFFFVDDSINADPDY--AE 252

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +   L  +   W                ++ +  + + ++G + + +G++S+E  S + 
Sbjct: 253 ELFRRLTTLRITW-------FGQATTALGMQQSLLETFARSGCSALLVGIESVEPASRKA 305

Query: 148 LGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ--WEMELQRALSYAVDHLSL 204
             +N +   E + ++   R+    +    IY L   T+      ++        V  +++
Sbjct: 306 HHKNQSRSDELVQSVRNIRSAGISLYGSFIYGLDGDTLETPAAILDFINQTELDVPGINI 365

Query: 205 YQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L    GT  + ++ ++G L+   ++ A   Y   Q + 
Sbjct: 366 --LRPTPGTQLFLRLREEGRLLFDPDDPAAFRYTFGQEML 403


>gi|303235393|ref|ZP_07322010.1| radical SAM domain protein [Finegoldia magna BVS033A4]
 gi|302493514|gb|EFL53303.1| radical SAM domain protein [Finegoldia magna BVS033A4]
          Length = 302

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQN 88
           KC YCD N   +++KV     I+     ++  +     +  +        G    ++   
Sbjct: 32  KCIYCDLN-VGKKFKVFD---IEDVKKYIRDRKDFYEDKRFTPKKFTLLEGNALCLKNDY 87

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +  IL  I KN    +   ++  +    +     +     +  G++RI +G++S  +  L
Sbjct: 88  LTEILKEIKKN--FPNMKYVSCFSRSDDILRKTDDELLELKNLGLDRICVGIESGSDWVL 145

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
            +  +   + E + A+H   N+  + S  ++  L  +  +        +         + 
Sbjct: 146 SYHKKGVTSQEQLTALHRLDNLGIKYSVYIMLGLGGEAHSCEHIMKTAEFLNKVNPFEIV 205

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +  L + K     +  ++ D    S    +    +         ++
Sbjct: 206 VVNLVLFKNAKLVENVRNHDFKRVSIRQQIIEEIMLVENLDISCVY 251


>gi|302388224|ref|YP_003824046.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
 gi|302198852|gb|ADL06423.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
          Length = 345

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +  RY++ ++  +    +  +      G R+   +  GG  P  
Sbjct: 61  YCKNDCYYCGIRKSNKNASRYRLSKDEILSCCESGYEL-----GFRTF--VLQGGEDP-A 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I + +      +  I  +      + +  Y +AG NR  L  ++ +E+
Sbjct: 113 FTDEAVVDIVKTIREGYP-----DCAITLSIGEKTYDQYLKYYEAGANRYLLRHETADEE 167

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L     +       +   + I  ++    +   P QT      +L      +   +
Sbjct: 168 HYSLLHPGSLSLENRKECLRNLKKIGYQVGTGFMVGSPYQTPKCLAEDLAFIKELSPQMV 227

Query: 203 SLYQLTIEKGTLFYKMH 219
            +      K T F    
Sbjct: 228 GIGPFIPHKDTPFASFP 244


>gi|296132994|ref|YP_003640241.1| RNA modification enzyme, MiaB family [Thermincola sp. JR]
 gi|296031572|gb|ADG82340.1| RNA modification enzyme, MiaB family [Thermincola potens JR]
          Length = 449

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 59/207 (28%), Gaps = 32/207 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-RSISSIFFGGGTPSLIEP 86
           C   C YC                I  ++   +  RQ+    R + S+   G     +  
Sbjct: 164 CNNFCTYC----------------IVPYVRGRERSRQIADIVREVKSLAEQGYKEVTLLG 207

Query: 87  QNIALILDGIAKNWTVSSNVEITIEAN-----------PSSVEVNNFQGYRKAG--VNRI 133
           QN+      + +    S  +E+  E +           P            ++       
Sbjct: 208 QNVNSYGKDLPEKTDFSDLLEVLNEIDGIRRIRYMTSHPRDFTSKLIDVIARSEKVCEHF 267

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L VQS     L+ + R +        +   R+  P  S   D+I   P +T   +E  +
Sbjct: 268 HLPVQSGSNSILKKMNRGYTREYYFELVAEIRSKIPHASITTDIIVGFPGETRQDFENTM 327

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
                   D    +      GT    M
Sbjct: 328 DLLDKVRYDSAFTFVYNKRSGTPAASM 354


>gi|322421523|ref|YP_004200746.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320127910|gb|ADW15470.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 454

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 76/214 (35%), Gaps = 14/214 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC + +   +    ++   +  + +M+  +   G   +   F      +  + Q
Sbjct: 189 CPHGCSYCSYPALEGKSYRCRDP--RRVVDDMERAKAEHG---VEEFFITDSVFNDCDGQ 243

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + ++ + + +   +  +  +     P  V         +AG++ + +G  + ++ +L  
Sbjct: 244 YLEVVREILRRRLEIRWSCYL----RPEGVGRRELALMMEAGLHAVEVGTDAADDTTLAA 299

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           LG+    ++ +             +  +++  P +TM   +  L+   +   +H  ++  
Sbjct: 300 LGKGFTFADVLELNRACVAERLSCAHFVMFGGPDETMESVQRGLENLETL--EHSVVFAF 357

Query: 208 T---IEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +   +  GT          L      +   +Y L
Sbjct: 358 SGIRVLPGTPLLARAIRDGLHPAGAPLREAVYYL 391


>gi|209520013|ref|ZP_03268791.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. H160]
 gi|209499552|gb|EDZ99629.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. H160]
          Length = 473

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++    + +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHRYRVRS-VENVLEEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 262

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  +  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 263 AEEIARGMGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 313

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  ++ A       + + 
Sbjct: 314 VNVKKGLRTDIARRFAQDCRTLGIKVHGTFILGLPGETPETIQKTIEYAKEINPLTIQVS 373

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y  
Sbjct: 374 LAAPYPGTTLYNQ 386


>gi|166031495|ref|ZP_02234324.1| hypothetical protein DORFOR_01193 [Dorea formicigenerans ATCC
           27755]
 gi|166028900|gb|EDR47657.1| hypothetical protein DORFOR_01193 [Dorea formicigenerans ATCC
           27755]
          Length = 327

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 9/217 (4%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C+      R    +E  ++    E+Q ++ L G      IF G G    ++   + 
Sbjct: 29  KCKFCNLF----RDLKYRELPLEQVEEELQRVKNLGGNP--RKIFLGDGNAFGLKMDRLR 82

Query: 91  LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            ILD I K +     + +     +         Q      V  + LG++S  +  L+F+ 
Sbjct: 83  AILDLIDKYFPDCQMINMDATVTSIRLKSDEELQELYDRKVRHLYLGIESGLDDVLKFMR 142

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + H   +A   I   + +       ++  +    +         +       D +  + L
Sbjct: 143 KEHTQDQAYKEIARIQKVGLIFDAHVMSGVAGKGRGQENAIALAEFLNKTQPDRIVNFSL 202

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            +      Y+  K G  +   E   ++       +  
Sbjct: 203 FLHNQVALYEDIKSGAFIPADEVENMEEERTLIELLK 239


>gi|154686803|ref|YP_001421964.1| YqeV [Bacillus amyloliquefaciens FZB42]
 gi|154352654|gb|ABS74733.1| YqeV [Bacillus amyloliquefaciens FZB42]
          Length = 451

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 76/234 (32%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           N A +L +   +   +      +IEA+   +     +    +   V  + + +QS     
Sbjct: 210 NFAKLLRELDTRVEGLKRIRISSIEAS--QITDEVIEVLDASDKIVRHLHIPIQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  +       ++ D+I   P +T  ++    +    +    L
Sbjct: 268 LKRMRRKYTMEFFADRLNKLKEALPGLAVTSDVIVGFPGETEEEFMETYRFIKEHKFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +     +      L +   S +     EI
Sbjct: 328 HVFPYSKRTGTPAARMEDQVDENVKNERVHKLIALSDQLAKEYASDYEGEVLEI 381


>gi|145344300|ref|XP_001416674.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576900|gb|ABO94967.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 516

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 80/259 (30%), Gaps = 28/259 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C+  C YC      +  +    ++ I + ++ ++            S    G     +  
Sbjct: 181 CLGACTYC----KTKHARGDLGSYEISALVSRVEQAMAEGVSEVWLSSEDTGAYGIDLGT 236

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF----QGYRKAGVNRI-SLGVQSLE 141
             +A +   I        +V + +        + +     +  R   V     + VQS  
Sbjct: 237 D-VAALFRAITAVLPTDGSVMLRLGMTNPPYILAHLDAVAEAMRHPSVYAWMHIPVQSGS 295

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L  + R +   E        LA      ++ D+I   P +T  QW+  +     Y  
Sbjct: 296 NAVLEGMKREYTVEEFKRVCDTLLAAVPGMVIATDIICGFPGETDEQWQETMSLIEEYKF 355

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-------E 252
             + + Q     GT   KM       +P++ V      LT    S               
Sbjct: 356 PEVHISQFYPRPGTPAAKM-----KRVPTQIVKARSRELTALFESYMPHEHLVGKTERVW 410

Query: 253 ISNHSFLGAESL--HNLNY 269
           +S+ +  G  SL  H  NY
Sbjct: 411 VSDIARDGT-SLVAHTKNY 428


>gi|238917088|ref|YP_002930605.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
 gi|238872448|gb|ACR72158.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
          Length = 446

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 69/195 (35%), Gaps = 9/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +    +  + E++ +        + +        + +E  
Sbjct: 160 CNQFCSYC---IIPYVRGRVRSRKPEDIVNEVKTLAATGVKEVVLTGIHISSYGTDLENI 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           ++  +++ I +   +      ++E  P  +     +             L +QS  +++L
Sbjct: 217 SLIELIEAIHEIEGIKRIRLGSLE--PRIITEEFAKRIAGLEKICPHFHLSLQSGCDKTL 274

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +N  E        R +F    ++ D+I   P +T   +    +         + 
Sbjct: 275 KAMNRKYNTEEYYEGCVKLREVFENPAITTDVIVGFPGETEEDFLETRKFLEKVHFYEMH 334

Query: 204 LYQLTIEKGTLFYKM 218
           +++ +  KGT+  KM
Sbjct: 335 IFKYSRRKGTVADKM 349


>gi|206900889|ref|YP_002250798.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
           H-6-12]
 gi|229890516|sp|B5YE40|MIAB_DICT6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206739992|gb|ACI19050.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
           H-6-12]
          Length = 440

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 75/248 (30%), Gaps = 27/248 (10%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C YC     +  Y  G+E         ++ +  L     +     G    
Sbjct: 149 IPIIYGCNNFCTYC-----IVPYLRGREKSRDP-EEIIREVEYLASQGVVEVTLLGQNVD 202

Query: 82  SL---IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           S    +   ++A +L  I +   +       + ++P  V     +             L 
Sbjct: 203 SYGKDLGNVDLADLLVEIHRIPRIKRIRF--LTSHPRDVSDKLIRVVATHPKVCPHWHLP 260

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +Q+  ++ LR +GR +  SE  A I    A       S D+I   P +    +    +  
Sbjct: 261 LQAGSDRILRRMGRGYTYSEYKALIEKIRAEIPKASFSTDIIVGFPGEEEEDFLATRRAL 320

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                D ++L   +   GT            L         ++  +++            
Sbjct: 321 EEIKFDTVNLAIYSKRPGT-----PAANYEDLIPYETKKRWFDELENLQRKIIYE----K 371

Query: 255 NHSFLGAE 262
           N S +G E
Sbjct: 372 NLSRVGKE 379


>gi|196232764|ref|ZP_03131615.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Chthoniobacter flavus Ellin428]
 gi|196223224|gb|EDY17743.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Chthoniobacter flavus Ellin428]
          Length = 476

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 15/228 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  +K   ++       EM   ++L     +   FF   T +  +P+
Sbjct: 209 CPAQCTFCLWPQTVGGHKYRAKSPAG-VAREMAHAQRLFP--QVKEFFFDDDTFTAYQPR 265

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              IA  L  +   W+ ++   +  E           +  R  G+  + +G +S  ++ L
Sbjct: 266 AREIARELGKLGMTWSCNARANVNYET---------LKTMRDNGLRLLLVGYESGVQRIL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +     EA       R +   +    I  LP +T       ++ A S  V  + + 
Sbjct: 317 DNIKKGIRIEEAREFTENCRKLGITIHGTFILGLPGETPETIRETIEYAKSLDVFSIQVS 376

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 GT  Y+  ++        ++  +      +     GL   EI
Sbjct: 377 LAAPYPGTELYRQARENGWFAGDAHLVDEFGQQAAA-LEYEGLTQAEI 423


>gi|149194207|ref|ZP_01871305.1| tRNA-i(6)A37 modification enzyme MiaB [Caminibacter mediatlanticus
           TB-2]
 gi|149136160|gb|EDM24638.1| tRNA-i(6)A37 modification enzyme MiaB [Caminibacter mediatlanticus
           TB-2]
          Length = 422

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 72/232 (31%), Gaps = 15/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C KKC +C      +         +   L +++ + +  G + I+    ++   G   S+
Sbjct: 146 CDKKCTFC---IVPKTRGKEISIPMDLILKQVENLAK-DGVKEITLLGQNVNNYGKRFSV 201

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P +     D + +   +     I     +P   +      +         I   +QS 
Sbjct: 202 --PHSKVDFTDLLREVSKIDGVERIRFTSPHPLHADDKFLDEFANNPKICKHIHFPLQSG 259

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             + L+ + R ++    +    + R I    +S D+I   P ++   ++  L        
Sbjct: 260 SSKILQSMKRGYDKEWFLNRCEIIRQIPDVAISTDIIVGFPGESEEDFKDTLDVVEKVKF 319

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + +  +  +    T         D  +  + +   L  L   I         
Sbjct: 320 EQIFSFVYSPRPLTEAANYPNQVDKEVAKKRL-WKLQELHAEILEEVSKKQI 370


>gi|150020569|ref|YP_001305923.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429]
 gi|149793090|gb|ABR30538.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429]
          Length = 429

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 86/255 (33%), Gaps = 16/255 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC    + R  ++  +         ++ + +      I+ +  G          
Sbjct: 147 CTNVCSYCT-IRYARGMRIRSKPIELVVSEILRMVNKDYKEIVITGLNLGKYG-----KD 200

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
               +L+ +     +  +  I +   NP  +     +     +   N + + +QS   + 
Sbjct: 201 KETSLLNLLKNVVKIKGDFRIRLSSINPEDINDELIKFIVNEEKVCNHLHVPLQSGSTKI 260

Query: 145 LRFLGRNHNASEAIA-AIHLARN-IFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + RN+  S+ +  A  L +  I   ++ D++   P +T   +E  L+         +
Sbjct: 261 LEKMRRNYTQSDFLNLAYKLRKEDINFSITTDIMVGFPGETQEDFEETLKVVKEVMFSKV 320

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS-FLGA 261
             ++ +    TL YKM    +  +P          L +        +   +   S  +  
Sbjct: 321 HTFRYSDRPNTLAYKM----ENKVPGNVKKERAIELDKFSKEVAKEYRKRLVGKSTKVII 376

Query: 262 ESLHNLNYWRYGDYI 276
           ES  N  Y  Y +Y 
Sbjct: 377 ESCKNKIYKGYDEYY 391


>gi|320161727|ref|YP_004174952.1| hypothetical protein ANT_23260 [Anaerolinea thermophila UNI-1]
 gi|319995581|dbj|BAJ64352.1| hypothetical protein ANT_23260 [Anaerolinea thermophila UNI-1]
          Length = 405

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 82/224 (36%), Gaps = 14/224 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP--RSISSIFFGGGTPSLIEPQNI 89
           C +C+F     R +  +    + F   M+ +R   G       +IF G     +I    +
Sbjct: 167 CTFCNFY----RDRPFRIKTPEMFREHMKAVRDFLGEGLSLRRTIFLGDANALVIPMPRL 222

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +++ I + + V     I    +  S       ++   R+ G+ R+ +G++S  ++ LR
Sbjct: 223 VPLMEAIHEQFDVEQLGGIYAFLDGFSAEKKTPADYARLRELGLQRVYIGMESGNDELLR 282

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QTMTQWEMELQRALSYAV----DH 201
           FL +   A + + A+   +     +   L+      Q   Q   +  RAL        D 
Sbjct: 283 FLKKPGTAEDVVQAVQAIKRGGVAVGIILLLGAGGHQFSAQHVADSIRALQAMPLDADDL 342

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +   +L  ++G  + +     +L   +    +      +   S 
Sbjct: 343 IYFSELVEDEGMQYTRDAYQANLRPLTPEERIAQGEAIEQALSF 386


>gi|91203722|emb|CAJ71375.1| hypothetical protein kustc0630 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 514

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 61/196 (31%), Gaps = 14/196 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C  NS          N +   +     +  +R L         +        +
Sbjct: 216 CPFHCTFCAANSVWSANDKAPGNPVVRKRPLAHVIDELRILQDVYKFDFFYI-------L 268

Query: 85  EPQNIAL---ILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSL 140
           +         I+D           +    E   + + ++   +  +++G  ++  GV++ 
Sbjct: 269 DDTFGTREKDIIDFCKAYSESGLKMLWAAETRVNCIKDMQIVKLLKESGSIQLDFGVETG 328

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             + L+ + +     + I A  L R    R   +++  LP +      +  +        
Sbjct: 329 SPRLLKAIKKQIVLEDTIQAFDLCRKNGIRTFANMLVNLPGEEAEDLNLTHKLLAEIKPT 388

Query: 201 HLSLYQLTIEKGTLFY 216
           + S+       GT  Y
Sbjct: 389 YTSVGVTQPYPGTEMY 404


>gi|88603600|ref|YP_503778.1| MiaB-like tRNA modifying enzyme [Methanospirillum hungatei JF-1]
 gi|88189062|gb|ABD42059.1| MiaB-like tRNA modifying enzyme [Methanospirillum hungatei JF-1]
          Length = 428

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 2/113 (1%)

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQW 187
            + + L +QS  +  L  +GR +  ++    I    A      ++ D+I   P +T    
Sbjct: 249 FSFLHLPIQSGSDHVLDLMGRGYTVADVQNIIDIFRAEMSDITIATDIITGFPGETDDDH 308

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           E  ++     A   +++ + +   GT   + H+  D +    + A+   + T 
Sbjct: 309 EETVRLIRRIAPGMVNVTRYSWRPGTGMSRDHELPDRIRKERSRAIIRESYTM 361


>gi|118580731|ref|YP_901981.1| MiaB-like tRNA modifying protein [Pelobacter propionicus DSM 2379]
 gi|118503441|gb|ABK99923.1| MiaB-like tRNA modifying enzyme [Pelobacter propionicus DSM 2379]
          Length = 427

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 82/214 (38%), Gaps = 16/214 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSI--SSIFFGGGTPSL 83
           C   C YC     +  Y  G+   + S    ++ +R+L   G R +  + I  G     L
Sbjct: 147 CDSFCSYC-----IVPYARGRSRSV-SPAEVLEGVRRLVDSGFREVVLTGIHLGAYGLDL 200

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +++A +++ I +  ++      ++E  P+  +      + ++    +   + +QS  
Sbjct: 201 SPGESLACLVERILEETSLERLRIGSLE--PNEFDDRLISLFSRSPRVCHHFHIPLQSGC 258

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  +GR ++A+   + +       P   +  D+I   P ++  +++          +
Sbjct: 259 DSVLTLMGRPYDAAYLRSLLERVIAAMPDSFLGSDIIAGFPGESDREFQTTCTLVEQLPL 318

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             L ++  ++  GT    +       +  +  A 
Sbjct: 319 ADLHVFPYSLRPGTRAASLPGHLPPAVIRDRAAR 352


>gi|237709651|ref|ZP_04540132.1| biotin synthase [Bacteroides sp. 9_1_42FAA]
 gi|229456287|gb|EEO62008.1| biotin synthase [Bacteroides sp. 9_1_42FAA]
          Length = 345

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +     T ++  R+       + +  GG  P  +  +
Sbjct: 62  CRNNCYYCG----IRKGNPAVARYALKRETILECCREGYALGFRTFVMQGGEDP-ALTDE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +  I   ++     +  I  +        ++ + +AG NR  L  ++  EQ  R 
Sbjct: 117 WIEATVAAIRNEFS-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETHNEQHYRK 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   + I  +    ++   P QT+     +L     +    + +  
Sbjct: 172 LHPEEMSLKHRLQCLQWLKEIGYQTGTGIMVGSPGQTLPHLVEDLLFIEQFHPQMIGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T F    
Sbjct: 232 FIPHHETPFGMEP 244


>gi|329847628|ref|ZP_08262656.1| RNA modification enzyme, MiaB family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842691|gb|EGF92260.1| RNA modification enzyme, MiaB family protein [Asticcacaulis
           biprosthecum C19]
          Length = 416

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 27/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS------ISSIFFGGGTP 81
           C  +C +C     +  Y  G      +     Q  R +    +      +    +G   P
Sbjct: 141 CDHRCTFC-----IIPYGRGNSRSAAAGDVVAQTQRLVAEGYNEIVLTGVDLTSWGNDLP 195

Query: 82  SL-----IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
                  +  + + L+ D      +     EI      +  E      Y       + L 
Sbjct: 196 GQPQLGNLVARILKLVPDLKRLRLSSIDAAEIDDTLFRAFAEEERLAPY-------LHLS 248

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H  ++A+A +   R+I P +    D+I   P +T   ++  +   
Sbjct: 249 LQHGDDLILKRMKRRHLRADAVALVEKVRSIRPDIAFGADMIAGFPTETEEHFDNAVSLV 308

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            +  + ++ ++  +    T   KM +    V+  +  A  L    +     H    
Sbjct: 309 DACGLSYVHVFPYSPRPQTPAAKMPQLPRPVI--KERAARLRAKAEEALRGHLARH 362


>gi|315230154|ref|YP_004070590.1| hypothetical protein TERMP_00390 [Thermococcus barophilus MP]
 gi|315183182|gb|ADT83367.1| hypothetical protein TERMP_00390 [Thermococcus barophilus MP]
          Length = 581

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 79/242 (32%), Gaps = 38/242 (15%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLI-------- 84
           C F +   RYK  ++  I   + E++ +  L     +     G      S +        
Sbjct: 219 CSFCTEPVRYKRVEDRPIGDIVEEIKVLYDLG----VRHFRVGRQSCIFSYMAEPNGRVP 274

Query: 85  --EPQNIALILDGIAKNWT-----VSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISL 135
              P+ +  +  GI +           N    + AN     +   +   K G   N ++ 
Sbjct: 275 VPNPEAVEKLFKGIREAAPNIKTLHVDNANPAVIANYPEESIKIAKALIKYGTPGNVVAF 334

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----------FDLIYALPKQTMT 185
           G+++ + +  +    N  A E   A+ +   I  +             ++I+ LP +T  
Sbjct: 335 GLETADPKVAKRNNLNTTAEETYEAVKILNEIGAKRGYNGMPWLLPGINIIFGLPGETKK 394

Query: 186 QWEMELQRALSYAVD-----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +E+  Q       D      +++ Q+ +  GT  + M            +    Y +  
Sbjct: 395 SYEITFQFLKRLVDDGLMVRRINIRQVVVFPGTPLWFMKDKVKTEKHKHLIKHYKYKIRH 454

Query: 241 SI 242
            I
Sbjct: 455 EI 456


>gi|296393361|ref|YP_003658245.1| RNA modification enzyme, MiaB family [Segniliparus rotundus DSM
           44985]
 gi|296180508|gb|ADG97414.1| RNA modification enzyme, MiaB family [Segniliparus rotundus DSM
           44985]
          Length = 514

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 75/235 (31%), Gaps = 19/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S   +        I + +  +  + +     ++          S  +P 
Sbjct: 180 CNNTCTFCIVPSLRGKQLDRAPQEIVAEVRAL--VAEGVLEVTLLGQNVNAYGSSFADPA 237

Query: 88  ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                   A +L  + +   +          +P+    +      +       + + +QS
Sbjct: 238 LPRDRGAFAKLLRSMGEIEGLERVRF--TSPHPAEFTEDVVLAMAETPNVCPHLHMPLQS 295

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R++ +++ +  +   R + P   ++ D+I   P +T   ++  L      
Sbjct: 296 GSDRVLKAMRRSYRSAKYLGIVRRVRELLPDAAITTDIIVGFPGETEEDFQATLDVVAQA 355

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  +Q +   GT   ++    D     + V  + Y     +     L   E
Sbjct: 356 RFASAYTFQYSKRPGTPAAELPDQID-----KEVVAERYQRLVELQERICLEENE 405


>gi|91203193|emb|CAJ72832.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 447

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 12/201 (5%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +   R  +    +        + +        ++ I  G     + +
Sbjct: 165 CDMYCSYC----IIPYVRGAIKSRKWQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSD 220

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQ 143
             ++  IL+ +++   +      +IE N   +          RK     + + +QS ++ 
Sbjct: 221 GISLVKILERLSEFSGLGRIRLSSIEVN--EITPELMHLIAERKTICPHLHIPLQSGDDL 278

Query: 144 SLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R + A+     +   R+    P ++ D++   P +T   ++  +          
Sbjct: 279 ILKRMNRKYTAAYYQEILDTIRSNIKLPAITTDVMVGFPGETERHFQNTVDFCTKAGYSR 338

Query: 202 LSLYQLTIEKGTLFYKMHKDG 222
           + ++  +I KGT    M    
Sbjct: 339 MHIFPFSIRKGTPAASMQNHC 359


>gi|322391713|ref|ZP_08065180.1| TIGR01212 family radical SAM protein [Streptococcus peroris ATCC
           700780]
 gi|321145423|gb|EFX40817.1| TIGR01212 family radical SAM protein [Streptococcus peroris ATCC
           700780]
          Length = 316

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    +++ +
Sbjct: 42  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNT---HESVEV 98

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        I LG+Q+  E +   +
Sbjct: 99  IRERYEQAINEPGVVGINIGTRPDCLPDETMAYLAELTERMHVTIELGLQTTFETTSELI 158

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 159 NRAHSYELYVETVQRIRKQVPKAEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLH 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + DG L L S++  V +      I   H +  
Sbjct: 219 LLHLMTNTRMQRDYHDGRLQLMSQDDYVKVVCDQLEIIPKHIVIH 263


>gi|311069144|ref|YP_003974067.1| YqeV protein [Bacillus atrophaeus 1942]
 gi|310869661|gb|ADP33136.1| YqeV [Bacillus atrophaeus 1942]
          Length = 451

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 72/233 (30%), Gaps = 11/233 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L  +         + I+     S +     +   ++   V  + + +QS     L
Sbjct: 210 NFAKLLRELDARVDGLKRIRIS-SIEASQITDEVIEVLDRSDKIVRHLHIPIQSGSNTVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        ++  +       ++ D+I   P +T  ++              L 
Sbjct: 269 KRMRRKYTMEFFADRLNKLKKALPGLAVTSDVIVGFPGETEEEFMETYDFIKENRFSELH 328

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S +     EI
Sbjct: 329 VFPYSKRTGTPAARMEDQVDENVKNERVHQLIALSDQLAKEYASDYEGEVLEI 381


>gi|293115612|ref|ZP_05792317.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
           DSM 2876]
 gi|292809090|gb|EFF68295.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
           DSM 2876]
          Length = 444

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 74/232 (31%), Gaps = 17/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C + C YC            +       + E++ +        + +   +   G      
Sbjct: 157 CNRFCSYC---IIPYVRGRIRSRKPDDVMAEIKRVAASGCKEVVLTGIHLSSYGLDF--- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +   ++D I     +     I +    P  V     +   K         L +QS  
Sbjct: 211 -KDSTVKLIDVIEAVNRIEGIERIRLGSLEPLIVTEEFVRRLAKCKKICPHFHLSLQSGC 269

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++L+ + R +N  E    + L R  FP   ++ D+I   P +T  ++ +  +       
Sbjct: 270 DETLKRMNRRYNVDEYYKGVELLREYFPDAAVTTDVIVGFPGETEEEFNITKKYLEKVCF 329

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             + +++ +  KGT   KM     +    ++           I S      Y
Sbjct: 330 YEMHVFKYSRRKGTAADKMPD--QIPENIKSERSTELLELNEILSNGYREKY 379


>gi|317132114|ref|YP_004091428.1| MiaB-like tRNA modifying enzyme [Ethanoligenens harbinense YUAN-3]
 gi|315470093|gb|ADU26697.1| MiaB-like tRNA modifying enzyme [Ethanoligenens harbinense YUAN-3]
          Length = 427

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 15/197 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   F+    R K  +E        E+  +R+     ++      G   S   
Sbjct: 152 CRNFCTYCIIPFSRGPVRSKPPEE-----ITAELATLREQGYAEAVLV----GINLSAYG 202

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + D +     V          +P +V         +         L +QS    
Sbjct: 203 SDLGRTLADAVDAAGRVGLARIRLGSLSPLAVTDEFITRAARCPSLCPHFHLSLQSGCVD 262

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L  + R +        +H  R+ FP  S   D+I   P +T  ++   L          
Sbjct: 263 TLARMNRRYTPDAFADTVHRLRSAFPDCSITTDIIAGFPGETEEEFAQTLDFVKQIGFSQ 322

Query: 202 LSLYQLTIEKGTLFYKM 218
             ++  +   GT    M
Sbjct: 323 AHVFPYSRRDGTRAAAM 339


>gi|163747528|ref|ZP_02154878.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex
           HEL-45]
 gi|161379206|gb|EDQ03625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex
           HEL-45]
          Length = 434

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 32/244 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K   +C F               +  L E + + +  G R ++ +      + GG   
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPAEKVLEEARDLVER-GVREVTLLGQNVNAYHGGMT- 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +A ++  +AK   +      T  ++P+ +  +    + +    +  + L VQS 
Sbjct: 214 ------LADLIRALAKVDGLERIRYTT--SHPNDMGDDLIAAHGEVPELMPYLHLPVQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R+H A   +  +   R   P +  S D I   P+++   +E  ++      
Sbjct: 266 SDHILKRMNRSHTAESYLKLLERIREARPDILLSGDFIVGFPEESDADFEATMELVRQVR 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
             +   ++ +   GT   +                   +  Q +      H  EI   S 
Sbjct: 326 YGYAYSFKYSTRPGTPAAERPLVDP---------AVADDRLQRLQGLITQHQREIQ-QSM 375

Query: 259 LGAE 262
           +G E
Sbjct: 376 VGRE 379


>gi|331085536|ref|ZP_08334620.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407423|gb|EGG86925.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 308

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 77/227 (33%), Gaps = 17/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI-FFGGGTPSLIEPQN 88
           C +C              N  +S   ++   ++    ++  +S I +F   T +  E   
Sbjct: 47  CIFCS----AGGSGDFAGNPRESIRQQIASGKEQIKKKTDAVSYIAYFQAYTNTYAEVSY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-----SLGVQSLEEQ 143
           +  I         V     ++I   P  ++        +   NRI      LG+Q++ EQ
Sbjct: 103 LEKIFTEAISCPEVK---ILSIATRPDCLDDEILTLLARL--NRIKPVWVELGLQTIHEQ 157

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           S +F+ R ++ S    A+   R I   +    I  LP +T    +  +    +  +  + 
Sbjct: 158 SAQFIRRGYSLSVFEEAVRNLRQIGVEVIVHTILYLPGETELMMQETISYLNTMDIQGIK 217

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  L I  GT     ++     +P+    +       +      +  
Sbjct: 218 LQLLHILHGTDLADYYETSPFFVPTMEEYIAFLGKCITQLRPDIVIH 264


>gi|325118100|emb|CBZ53651.1| putative radical SAM domain-containing protein [Neospora caninum
           Liverpool]
          Length = 863

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 7/123 (5%)

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
              + L +QS     L  + R + A +    +      FPRM+   D+I   P +T    
Sbjct: 675 FEFLHLPLQSGSNDVLLAMNREYTAEQFEVVVETLLKHFPRMTIATDIICGFPGETEEDH 734

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           E  L     +    +++ Q     GT    M       LPS+ V      +T    S   
Sbjct: 735 EKTLAIIKKFKFPVVNISQFYPRPGTPAASM-----KQLPSQIVKRRSREVTALFESYTC 789

Query: 248 LHA 250
              
Sbjct: 790 YDW 792


>gi|304438410|ref|ZP_07398350.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304368493|gb|EFM22178.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 437

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 74/265 (27%), Gaps = 24/265 (9%)

Query: 5   SAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR 63
            A E ++      +L  +V   + C   C YC     +  Y  G+E   ++    +  +R
Sbjct: 132 HAVEEDLPIARGGTLSAWVPIMYGCNNYCTYC-----IVPYVRGRERS-RTPEEVVAEVR 185

Query: 64  QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNF 122
           +            G    S  +    A   D +     V     +  + ++P  +     
Sbjct: 186 RAAADGYREVTLLGQNVNSYGKDHGQADFADLLRMVDAVEGIRRVRFMTSHPKDISDKLI 245

Query: 123 QGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYA 178
              +        I L VQ    + L+ + R +   +        R       ++ DLI  
Sbjct: 246 DTIKNGTHICEHIHLPVQYGSNRILKAMNRVYTVEQYRERARRVREALPGASLTTDLIVG 305

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            P +T   +   L        D    +  +   GT    M             A     +
Sbjct: 306 FPGETEEDFAETLDFLREMRYDAAYTFLYSKRSGTPAAAM------------AAQVPDEV 353

Query: 239 TQSITSAHGLHAYEISNHSFLGAES 263
             +          EIS     G  S
Sbjct: 354 KHARLERLMAVQNEISRAINEGLRS 378


>gi|224476850|ref|YP_002634456.1| hypothetical protein Sca_1367 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421457|emb|CAL28271.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 318

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 69/215 (32%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C   +    +   + + I     E++              +F   
Sbjct: 40  CPNRDGTVAHGGCTFCS-AAGSGDFAGNRADPIDVQFKEIKEKMHEKWHDGQYIAYFQAF 98

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLG 136
           T +    + +    + + K   V   V ++I   P  +            K     + LG
Sbjct: 99  TNTHAPVEVLKEKFEPVLKEPGV---VGLSIGTRPDCLPDDVVEYLADLNKRTYLWVELG 155

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +Q++ +++   + R H+       +   R     +   +I  LP +         +    
Sbjct: 156 LQTVHQETSDLINRAHDMQTYYDGVAKLRKYNINVCSHIINGLPGEDYDMMMETAKTVAQ 215

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             V  L ++ L + KGT   K ++ G L   ++  
Sbjct: 216 MDVQGLKIHLLHLLKGTPMVKQYEKGMLEFMTQEE 250


>gi|262195718|ref|YP_003266927.1| MiaB-like tRNA modifying enzyme YliG [Haliangium ochraceum DSM
           14365]
 gi|262079065|gb|ACY15034.1| MiaB-like tRNA modifying enzyme YliG [Haliangium ochraceum DSM
           14365]
          Length = 486

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 21/240 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTP 81
           C + C +C     + + +  Q    I S + E + +    G R I+ I      +G   P
Sbjct: 190 CDRPCSFC----IIPKLRGPQRSRSIDSVVAETEALVA-GGAREINLIAQDLTRYGADLP 244

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +   P     +   + +   V     + +    PS+      +   +    V  I + +Q
Sbjct: 245 A--GPDGRPNLAGLLRRVARVPGVRWVRLHYTYPSAFTDELIEVIAEEPTVVKYIDVPLQ 302

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
            ++++ L+ + R H+A      +   R     +      I   P +T   +   L     
Sbjct: 303 HIDDEMLKRMRRGHSARVTHELVAKLRQRIDGLVLRTTFIVGHPGETDESFGRLLDFVRE 362

Query: 197 YAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + +  +  +IE GT   +              + +      + ++          E+
Sbjct: 363 TRFERVGAFTYSIEPGTVSGMLPNRVPPEVAEARRDELMALQSEIHRAHNQTLIDREIEV 422


>gi|225351354|ref|ZP_03742377.1| hypothetical protein BIFPSEUDO_02948 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157698|gb|EEG70981.1| hypothetical protein BIFPSEUDO_02948 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 484

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 88/265 (33%), Gaps = 23/265 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L+ + + +    ++ +  +V     C   C +C             +      L E++
Sbjct: 159 EELNYFPSQLPTDRASKVSSWVAISVGCNNTCTFC---IVPTTRGKEHDRRPGDILAEIR 215

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L    +   +          +P
Sbjct: 216 QCVDEGAKEVTLLGQNVNSFGYGIG-----DRFAFSKLLRACGEIEGLERVRF--TSPHP 268

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 269 AAFTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILRKIREAMPDAQ 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  L+            +  +   GT   +M       +    
Sbjct: 329 ISTDIIVGFPGETEEDFQKTLRVVEEARFASAFTFIYSPRPGTPAAEMEQVPHDVVQDRF 388

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEI 253
           E +      +T+           E+
Sbjct: 389 ERLVALQERITEENLKTFEGRDVEV 413


>gi|158521760|ref|YP_001529630.1| MiaB-like tRNA modifying enzyme [Desulfococcus oleovorans Hxd3]
 gi|158510586|gb|ABW67553.1| MiaB-like tRNA modifying enzyme [Desulfococcus oleovorans Hxd3]
          Length = 451

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 68/234 (29%), Gaps = 19/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C   C YC     V   +    +     +          G R +      +   G     
Sbjct: 157 CNAFCAYC----IVPHARGPSVSMTPDRVMAALAALDADGRREVVLAGIHLGLYGAD--- 209

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           + P  ++  +L  + +   VS     +IE  P  +  +            +   L +QS 
Sbjct: 210 LSPSVSLLELLTTVVRRRLVSRLRLSSIE--PCELTDDLLDLAAGTDMICDHFHLPLQSG 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L  +GR + A      +   R   P   +  D++   P +T   +E       +  
Sbjct: 268 SNDVLGRMGRPYTAEVYADRVAAVRKRVPHAAIGADVLVGFPGETAALFEETFCLVETLP 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           V +L ++  +   GT    M                L NL          + YE
Sbjct: 328 VSYLHVFPFSSRPGTRAAAMDNPVPAEEIKSR-CARLRNLGAEKKRIFCQNNYE 380


>gi|332228849|ref|XP_003263603.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1
           [Nomascus leucogenys]
          Length = 536

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 386 FPSLFINQFYPRPGTPAAKM 405


>gi|297677249|ref|XP_002816517.1| PREDICTED: LOW QUALITY PROTEIN: CDK5 regulatory subunit-associated
           protein 1-like 1-like, partial [Pongo abelii]
          Length = 577

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 386 FPSLFINQFYPRPGTPAAKM 405


>gi|284048363|ref|YP_003398702.1| MiaB-like tRNA modifying enzyme YliG [Acidaminococcus fermentans
           DSM 20731]
 gi|283952584|gb|ADB47387.1| MiaB-like tRNA modifying enzyme YliG [Acidaminococcus fermentans
           DSM 20731]
          Length = 442

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 54/220 (24%), Gaps = 14/220 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC        Y+         +   +Q  R L   + +  +       +     
Sbjct: 153 CNNRCSYCAIPKIRGPYRSRP------YEEVLQEARDLV-SQGVRELILVAQDTTQYGID 205

Query: 88  NIAL---ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                         N          +   P S      +   +     + + L +Q    
Sbjct: 206 LYHKLRLADLLRDLNTIPDLKWIRILYCYPDSFTDELIETMAQCDKVCHYVDLPLQHASN 265

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R     +    +   R   P +      I   P +T  Q++  L         
Sbjct: 266 SLLHTMHRRDTREQVEELLAKLRKRMPDICLRTTFIVGFPGETDGQFQELLDFVRKERFQ 325

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              ++  + E GT    M       +  +     +    +
Sbjct: 326 CAGVFPYSQEDGTEAGAMPNQIPDEVKQDRYHALMSLQAE 365


>gi|149202109|ref|ZP_01879082.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
 gi|149144207|gb|EDM32238.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
          Length = 440

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 49/118 (41%), Gaps = 4/118 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P+ ++ +    + +    +  + L VQS  ++ L+ + R+H A   +  I   R  
Sbjct: 238 TTSHPNDMDDDLIAAHGECAKLMPYLHLPVQSGSDRILKRMNRSHTAESYLRLIERIRAA 297

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            P +  S D I   P++T   ++  ++   +        ++ +   GT   +  +  +
Sbjct: 298 RPDILLSGDFIVGFPEETDADFQATMELIEAVNYGSAFSFKYSTRPGTPAAERPQVPE 355


>gi|114605652|ref|XP_001171194.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           isoform 4 [Pan troglodytes]
          Length = 536

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 386 FPSLFINQFYPRPGTPAAKM 405


>gi|114605648|ref|XP_001171161.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           isoform 3 [Pan troglodytes]
 gi|114605650|ref|XP_001171227.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           isoform 5 [Pan troglodytes]
          Length = 579

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 386 FPSLFINQFYPRPGTPAAKM 405


>gi|114605654|ref|XP_001171147.1| PREDICTED: CDK5 regulatory subunit associated protein 1-like 1
           isoform 2 [Pan troglodytes]
          Length = 509

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 144 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 202 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 255

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 256 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 316 FPSLFINQFYPRPGTPAAKM 335


>gi|93277076|ref|NP_060244.2| CDK5 regulatory subunit-associated protein 1-like 1 [Homo sapiens]
 gi|74747199|sp|Q5VV42|CDKAL_HUMAN RecName: Full=CDK5 regulatory subunit-associated protein 1-like 1
 gi|55665181|emb|CAH72474.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|55665277|emb|CAH73074.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|55665283|emb|CAH72467.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|55665292|emb|CAH73706.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|56202708|emb|CAI19768.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|56202711|emb|CAI21023.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|56202969|emb|CAI20280.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|56205108|emb|CAI21687.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|111309189|gb|AAI21021.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|111309398|gb|AAI21022.1| CDK5 regulatory subunit associated protein 1-like 1 [Homo sapiens]
 gi|119575830|gb|EAW55426.1| CDK5 regulatory subunit associated protein 1-like 1, isoform CRA_b
           [Homo sapiens]
 gi|158256902|dbj|BAF84424.1| unnamed protein product [Homo sapiens]
          Length = 579

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 386 FPSLFINQFYPRPGTPAAKM 405


>gi|7020375|dbj|BAA91102.1| unnamed protein product [Homo sapiens]
          Length = 579

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 386 FPSLFINQFYPRPGTPAAKM 405


>gi|110638137|ref|YP_678346.1| 2-methylthioadenine synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280818|gb|ABG59004.1| possible 2-methylthioadenine synthetase [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 438

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 72/228 (31%), Gaps = 14/228 (6%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEPQNI 89
           C Y C F +        + + I + +   + +        + + +  G     +I     
Sbjct: 151 CDYSCSFCTIPLARGSSRSDTIANIVKTAKEIAAKDVKEIVLTGVNIGDYG--IISGTRT 208

Query: 90  ALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLR 146
              LD I +   V       I    P+ +           +  V    + +QS  ++ L+
Sbjct: 209 TSFLDLIKELDKVEGIERFRISSIEPNLLTDEIISFVSTSRRFVPHFHIPLQSGNDKILK 268

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R +        +   + + P   +  D+I   P +T   + +         + +L +
Sbjct: 269 LMRRRYKRELYAERVEAIKKVMPHACIGVDVIVGFPGETDEDFNVTYNFLNELDISYLHV 328

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  +    T    +        P+ + +     + ++++       YE
Sbjct: 329 FSYSERANT----LAATMKGKRPNRDRSERS-TMLRTLSEKKRRFFYE 371


>gi|189184684|ref|YP_001938469.1| tRNA-methylthiotransferase MiaB protein [Orientia tsutsugamushi
           str. Ikeda]
 gi|229890583|sp|B3CV38|MIAB_ORITI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|189181455|dbj|BAG41235.1| tRNA-methylthiotransferase MiaB protein [Orientia tsutsugamushi
           str. Ikeda]
          Length = 449

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I ++P+ +       +   +  +  + L VQS   + L+ + R H+    +  I   R +
Sbjct: 243 ITSHPNDMTDQLLSLHATEEKLMPFLHLPVQSGSNKILKLMNRRHSRERYLEIIQQLREL 302

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            P +    D+I   P +    +E  L  A          ++ +   GT 
Sbjct: 303 RPDIVISSDIIVGFPGEDDEDFEATLSLAKEARFGQCYSFKYSQRPGTP 351


>gi|300770384|ref|ZP_07080263.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300762860|gb|EFK59677.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 478

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 82/245 (33%), Gaps = 30/245 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-----------WMRQLTGPRSISSIFF 76
           C   C +C            +   + S + E Q            + Q       ++   
Sbjct: 186 CDNMCSFC---VVPFTRGRERSRDVDSIIKEAQDLFNAGYREVTLLGQNVDSYKFTAPVA 242

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRI 133
            G +P+  EP N A +L   AK   VS  + +     +P  +         +     N I
Sbjct: 243 EGESPA--EPVNFAQLL---AKVADVSPLLRVRFSTSHPKDITDEVLHTMARYENICNYI 297

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMEL 191
            L VQS   + L  + R ++ +  I  +   R I P   +S D+I     +T  + +  L
Sbjct: 298 HLPVQSGNSRVLELMNRTYDRAWYIDRVDAIRRILPECGISTDVITGFCTETEEEHQETL 357

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                   D+  ++  +   GTL  K ++D           +    LT+ +        Y
Sbjct: 358 SMMDYVKYDYAYMFAYSERPGTLAAKRYED------DIPEEIKKRRLTEVVAKQRLHSHY 411

Query: 252 EISNH 256
            I N 
Sbjct: 412 RIQNF 416


>gi|238927480|ref|ZP_04659240.1| tRNA 2-methylthioadenine synthetase [Selenomonas flueggei ATCC
           43531]
 gi|238884762|gb|EEQ48400.1| tRNA 2-methylthioadenine synthetase [Selenomonas flueggei ATCC
           43531]
          Length = 437

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 75/264 (28%), Gaps = 24/264 (9%)

Query: 6   AYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           A E ++    S +L  +V   + C   C YC            +    +  + E++    
Sbjct: 133 AVEEHLPIARSGTLSAWVPIMYGCNNYCTYC---IVPYVRGRERSRMPEEVVAEVRRAAA 189

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQ 123
             G R ++ +  G    S  +    A   D +     V     +  + ++P  +      
Sbjct: 190 -DGYREVTLL--GQNVNSYGKDHGQADFADLLRMVDAVEGIRRVRFMTSHPKDISDKLID 246

Query: 124 GYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYAL 179
             +        I L VQ    + L+ + R +   +        R       ++ DLI   
Sbjct: 247 TIKNGTHICEHIHLPVQYGSNRILKAMNRVYTVEQYRERARRVREALPGASLTTDLIVGF 306

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           P +T   +   L        D    +  +   GT    M             A     + 
Sbjct: 307 PGETEEDFAETLDFLREMRYDAAYTFLYSKRSGTPAAAM------------AAQVPDEVK 354

Query: 240 QSITSAHGLHAYEISNHSFLGAES 263
            +          EIS     G  S
Sbjct: 355 HARLERLMAVQNEISRAINEGLRS 378


>gi|148270321|ref|YP_001244781.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147735865|gb|ABQ47205.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
          Length = 551

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 84/255 (32%), Gaps = 39/255 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIFFG----G 78
           C ++  +C F +    +   +   +Q+ L E++ +     R     R+ + + FG    G
Sbjct: 184 CERR-TFCSFCTEPLLHGRLKSRDVQAILKEIESLYRAGCRAFRFGRAANILAFGSDRNG 242

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV---------EVNNFQGYRKAG 129
           G PS   P+ +  +  G  +       +     ANPS +          V     Y   G
Sbjct: 243 GKPS---PEILEELYSGTREVAPHLEVLHTD-NANPSYLVTYEKECRKIVETIVRYNTPG 298

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM---------SFDLIYALP 180
            +  S GV+S +E  L+      +  E + AI +   I               +LI+ LP
Sbjct: 299 -DVFSFGVESFDENVLKKNNVQGSPEEFLKAIAVVNEIGGVRVDGIPKLLPGVNLIFGLP 357

Query: 181 KQTMTQWEMELQRALSYAVD-----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
            +T    +           +      +++ +L    GT  Y+ +          ++    
Sbjct: 358 GETEETLKKNYSYLKRILDEGYLLRRINIRKLLAYPGTPVYE-YLKNKKHRIKSHLHEQW 416

Query: 236 YNLTQSITSAHGLHA 250
               +       L  
Sbjct: 417 KRKIREEIDREMLKR 431


>gi|323126653|gb|ADX23950.1| Fe-S oxidoreductase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 313

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVKQYLVYFQNFTNT---HDKVEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E++   +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAEVAERMHVTVELGLQTTYEKTSEMI 159

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+       +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 160 NRAHSYDLYKETVKRLRQYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 219

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 220 LHLMTNTRMQRDYHEGRLQLLSQEDYVSIICDQLEIIPKHIVIH 263


>gi|253573595|ref|ZP_04850938.1| MiaB-like tRNA modifying enzyme YliG [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847123|gb|EES75128.1| MiaB-like tRNA modifying enzyme YliG [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 442

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 10/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C   S        +   ++S L E++    Q     S+ +         L   
Sbjct: 156 CDNNCTFC---SIPIMRGKFRSRSMESILEEVRSMAAQGVKEISLIAQDSTNYGTDLYGE 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +A ++D + +   V         A P        +           + + +Q  E+  
Sbjct: 213 FKLAELMDRVTQVEGVEWVRLHY--AYPGFFTDELIEMMATNPKICKYVDMPLQHSEDSI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R     +    I   R   P +S    LI   P +T   +E   +       D L
Sbjct: 271 LKRMRRPGRNRDIRELIAKIRARIPNVSLRTSLIVGFPGETEEDFERLCEFVREIKFDRL 330

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
            ++  + E+ T   ++    D
Sbjct: 331 GVFTYSKEEDTPASRLPDQVD 351


>gi|222823299|ref|YP_002574872.1| radical SAM domain family (UPF0004 domain protein) [Campylobacter
           lari RM2100]
 gi|222538520|gb|ACM63621.1| conserved hypothetical protein, radical SAM domain family (UPF0004
           domain protein) [Campylobacter lari RM2100]
          Length = 438

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K       +S  + +  ++ L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKS------RSLESIVNEVKSLVEKGYKDFSFIAQDTSSYLFDQ 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            +   +  ++D I     + +   + +   P+S+     +     K  VN   + +Q + 
Sbjct: 200 GQKDGLIKLIDAIESIKGIKAARILYL--YPTSISKEVIEKIIHSKVFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHL---ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N ++ I  ++L   A N F R     I   P ++   +    +    ++
Sbjct: 258 DNMLKIMKRGMNKTKLIELLNLMRKAPNSFLRTG--FIVGHPGESDDDFNELCEFLKEFS 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRISVFAYSKEEDTAAFNM 335


>gi|320353886|ref|YP_004195225.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122388|gb|ADW17934.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 289

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 91/238 (38%), Gaps = 18/238 (7%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C      +R+ +  ++ I +   ++ +            +  G     LI P
Sbjct: 25  CSHNKCTFCGMYK-GQRFSIKSDDIIFA---DIDYASNYFSFARRLFLCDGDA---LIVP 77

Query: 87  QNIALILDGIAKNWTVSSNV-EITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEE 142
           Q    +L  + +  T    V  + I AN  S+    V   +  R+ G+  + +G++S ++
Sbjct: 78  QQ--RLLAILQRIETRLPQVTRVGIYANSKSLRLKTVEELRQLRQHGLGIVYMGLESGDD 135

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVD 200
            +L  + +   A E IA    A+     +S  ++  +    ++        +   +   +
Sbjct: 136 STLARMHKGATAEEMIAMGQKAKAAGLPLSLTVLLGIAGPERSAIHATETGRVLSAIDPE 195

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSE--NVAVDLYNLTQSITSAHGLHAYEISNH 256
           ++    L +E GT  +  ++DG   +P     +      +  +  S    HA   SN+
Sbjct: 196 YVGALSLMLEPGTQLHDQYRDGRFAMPEPLAILQELRTMIAATELSNGLFHANHASNY 253


>gi|283954250|ref|ZP_06371774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794268|gb|EFC33013.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 433

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIKDLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P ++   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVNISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|239623774|ref|ZP_04666805.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521805|gb|EEQ61671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 448

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 29/237 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C K+C YC            +   ++  L E + +          +    ++      GG
Sbjct: 157 CDKRCTYC---IIPYLRGPYRSVPMEQLLEEARQLASGGVKELILVAQETTLYGKDIYGG 213

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                  +++  +L  +A+   +           P  +     +  R  +   + + + +
Sbjct: 214 -------KSLPKLLHELAQIPGIQWIR--IQYCYPEEITDELIEAIRSEEKVCHYLDIPI 264

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q    + L+ +GR  N  E    I   R   P ++    +I   P +T    E  +    
Sbjct: 265 QHASNRILKRMGRRTNREELTERIAKLRKEIPDIALRTTMISGFPGETQADHEELMDFVN 324

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               + L ++  + E+ T  Y            + V  +  +    +         E
Sbjct: 325 EMEFERLGVFAYSAEEDTPAYSYPDQV-----PQEVKEERRDEIMELQQDIAFGHCE 376


>gi|254457437|ref|ZP_05070865.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacterales
           bacterium GD 1]
 gi|207086229|gb|EDZ63513.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacterales
           bacterium GD 1]
          Length = 433

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 73/208 (35%), Gaps = 16/208 (7%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--- 71
           ++    +++    C K C YC     V + +  + +   + +         +G + I   
Sbjct: 137 TSPYKAFINISIGCDKACTYC----IVPKTRGDEISIPDALIIREAERAVDSGAKEIFLL 192

Query: 72  -SSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             ++   G   S    + N + +L  ++K   +          +P  ++    + +    
Sbjct: 193 GQNVNNYGRRFSGEHEKVNFSELLRRLSKIEGLERLRF--TSPHPFHMDDEFIEEFASNP 250

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMT 185
                + + +QS   + L+ + R ++    +  +    A      +S D+I A P ++  
Sbjct: 251 KICKSMHMPLQSGSTKVLKDMKRGYSKEWFLNRVEKLRAECPQVSISTDIIVAFPGESDE 310

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +E  L        + +  ++ +    T
Sbjct: 311 DFEDSLDVMRQVRFNQIFSFKYSARPET 338


>gi|187933390|ref|YP_001885483.1| hypothetical protein CLL_A1285 [Clostridium botulinum B str. Eklund
           17B]
 gi|238065363|sp|B2TJ67|RIMO_CLOBB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|187721543|gb|ACD22764.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 446

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 80/232 (34%), Gaps = 24/232 (10%)

Query: 7   YENNMTGQGSNSL-----GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y +    +G+  L       Y+     C   C YC       +++  +       +  + 
Sbjct: 130 YSDENINEGNRILTTQKESAYIRIAEGCNNFCTYCIIPKIRGKFRSRR-------MENII 182

Query: 61  WMRQLTGPRSISSIFFGGGTPS-----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                   + +  +       +     +   +N+ ++L  ++K   +       +   P 
Sbjct: 183 SEATDLASQGVKELILIAQDTTQYGSDIYGKKNLHVLLKELSKIEGIKWIR--VLYCYPE 240

Query: 116 SVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
           ++     +     +  V  + + +Q + +  L+ +GR  +  +    I   R   P +  
Sbjct: 241 AIYDELIEEIAVNEKVVKYLDIPIQHISDHVLKLMGRKTSKKDITDKIEKLRKSIPNIII 300

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               I   P++T   +E  L+    Y +D + +++ + E+ T   KM    D
Sbjct: 301 RTTFIVGFPQETQEDFEEILEFLQEYKLDKVGVFKYSREEDTPASKMDGQID 352


>gi|150390794|ref|YP_001320843.1| RNA modification protein [Alkaliphilus metalliredigens QYMF]
 gi|149950656|gb|ABR49184.1| RNA modification enzyme, MiaB family [Alkaliphilus metalliredigens
           QYMF]
          Length = 433

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 72/204 (35%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C + C YC     +   +    +  +  +  +Q ++ L        +  G    S    L
Sbjct: 152 CNQYCAYC----IIPYARGPIRS--RGKIEIIQEVQTLVNNGFKEVVLTGIHVASYGKDL 205

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            + + +  +L  +     +      ++E  P+           K     +   L +QS  
Sbjct: 206 GDHEGLLDVLKRVNAIEGLERIRLSSLE--PTLFSDAFLSALSKLEKICDHFHLSLQSGS 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +++L+ + R + +      +   R+ +P ++   D+I   P +T   ++         A 
Sbjct: 264 DKTLKKMNRKYTSQMYRETVKRIRHYYPLVALTTDIIVGFPGETDVDFQTSYDFVEEMAF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
             + +++ +  +GT   +     D
Sbjct: 324 SEIHVFKYSPREGTPAAQFDDQID 347


>gi|149187247|ref|ZP_01865545.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Vibrio shilonii AK1]
 gi|148838783|gb|EDL55722.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Vibrio shilonii AK1]
          Length = 290

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 77/224 (34%), Gaps = 13/224 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP--QNI 89
           C +C     +   K  +   + +   ++    +   P   S     G     +    + +
Sbjct: 30  CTFCS----MFDDKRFKVRDLDAVFKDVD-DARFIYPHVDSIFLIDGNV---MAARTEYL 81

Query: 90  ALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +LD +   +  +S + +    N      V+  +  + AG++    G++S +   L  +
Sbjct: 82  VKLLDKLRNTFPEASKISMYSGLNDFRRKTVSELKEIKDAGLDMCYSGLESGDPVVLERI 141

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQ 206
            +   A  AI  +  A+          I+ L    ++        +       + ++   
Sbjct: 142 KKRMTAQHAIEGMARAKEAGIETLLSFIFGLGGRERSKEHIVATTELLNITNPEQIAPMA 201

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L I+ GT+  +  + G+ ++P++   ++         +    + 
Sbjct: 202 LAIQPGTIMEQEVQRGEFIMPTQLQVLEEEKYLLENLNIDTFYW 245


>gi|310658010|ref|YP_003935731.1| radical sam domain-containing protein [Clostridium sticklandii DSM
           519]
 gi|308824788|emb|CBH20826.1| Radical SAM domain protein [Clostridium sticklandii]
          Length = 440

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 21/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C             +  ++  + +++ ++ L   +    +       S  +  
Sbjct: 171 CPNSCSFCS--VSCLYKGRYIKRPLEEVVRDIKQIKDLGFKK---ILLLDDNIFS--DRD 223

Query: 88  NIALILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  +LD   + N T  S  EITI       + +  Q   K+G   +S G++S+ ++SL 
Sbjct: 224 YLHKLLDTFIELNVTWMSQCEITIGH-----DNDLLQKLYKSGCQTLSFGLESITKESLD 278

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + ++    S+    I   R     +S +++      T+              +     Y
Sbjct: 279 KMDKSWAKPSDYDYLIQNIRKHGIDVSTEMVVGAEGDTLESIRKTKDFIEKNKISVPRFY 338

Query: 206 QLTIEKGTLFY-------KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            LT   GT F+       ++           +      N+T    +A     YE 
Sbjct: 339 ILTPFPGTRFFEQIEKAGRLVNKDIYSYDGTSAVYKPQNMTPDELTAVYWELYEN 393


>gi|167042354|gb|ABZ07082.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_ANIW97M7]
          Length = 422

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 22/204 (10%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C+ +C +C       D NS+     V Q +  +     E+       G      +  G  
Sbjct: 145 CMSECTFCQTKLAKGDLNSYRIGDIVRQVKRELADGCKEIWLSSTDNG---CYGLDIGED 201

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQ 138
             SLI  + ++ I +       + + + +        +  N  + +    V R + + VQ
Sbjct: 202 LSSLI--EQVSQIPEDFKIRVGMMNPMFMP------RIRDNLLKSFENNKVFRFLHVPVQ 253

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALS 196
           S     L  + R H        +   R  F    +S D+I   P +T   +E  +     
Sbjct: 254 SGSNDVLNNMKRGHTVETFKDVVRKFRTKFGPFTISTDIIIGYPTETQENFEETIALLKE 313

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
              D ++L + +   GT+  +M +
Sbjct: 314 TRPDIVNLSRYSQRPGTVAAEMPQ 337


>gi|170694241|ref|ZP_02885396.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia graminis C4D1M]
 gi|170140981|gb|EDT09154.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia graminis C4D1M]
          Length = 473

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHR-YRTRSVENVLAEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 262

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +              +  ++ G+  + +G +S ++Q L
Sbjct: 263 VEEIARGLGKLGVTWSCNAKANVPYST---------LKIMKENGLRLLLVGYESGDDQIL 313

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T    +  +  A       + + 
Sbjct: 314 LNIRKGLRTDIARRFSDDCRKLGIKIHGTFILGLPGETQQTIQKTIDYAKEINPHTIQVS 373

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y  
Sbjct: 374 LAAPYPGTRLYDQ 386


>gi|322689418|ref|YP_004209152.1| hypothetical protein BLIF_1234 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460754|dbj|BAJ71374.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 480

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 155 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 211

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 212 QCVADGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 264

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 265 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIREAMPDAQ 324

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 325 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 384

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 385 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 417


>gi|296454331|ref|YP_003661474.1| MiaB family RNA modification protein [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296183762|gb|ADH00644.1| RNA modification enzyme, MiaB family [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 479

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 154 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 210

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 211 QCVADGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 263

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 264 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIREAMPDAQ 323

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 324 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 383

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 384 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 416


>gi|258645469|ref|ZP_05732938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
           15470]
 gi|260402822|gb|EEW96369.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
           15470]
          Length = 447

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 74/214 (34%), Gaps = 8/214 (3%)

Query: 34  YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALI 92
           YC F      R K+       +     + + +      ++ I  G     L +  +++ +
Sbjct: 166 YCTFCIIPFARGKLKSRRQSDAVEEIRRLVEKGYREVVLTGIHLGNYGKDLHDGTSLSTL 225

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGR 150
           +  + +   +      +IE+    +     +  R+       + L +Q+  +  L+ + R
Sbjct: 226 VTELVRIPDLLRIRLGSIES--VELSDELIRIIREEPKVCPHLHLPIQAGSDDILKRMNR 283

Query: 151 NHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           ++  +E    I   R   P ++   DLI   P +T   +   L          + ++  +
Sbjct: 284 HYRLAEYKELIRNLRKEIPGLALTTDLIVGFPGETEENFRETLDTLQELQFSAIHVFPYS 343

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             KGT     + +       +  A  +  L + +
Sbjct: 344 PRKGTP-AAAYPNQVKPEIKKERAARVQALGKEL 376


>gi|254437866|ref|ZP_05051360.1| MiaB-like tRNA modifying enzyme [Octadecabacter antarcticus 307]
 gi|198253312|gb|EDY77626.1| MiaB-like tRNA modifying enzyme [Octadecabacter antarcticus 307]
          Length = 424

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 78/200 (39%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C     +  Y  G    + + +  ++ +++L G +  + I   G   +     
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIKRLVG-KGYNEIVLTGVDLTSWGAD 202

Query: 88  N--IALILDGIAKNWTVSSNVEI--TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +  + D + +   +  ++        +   V+ N  +        +  + L +Q  +
Sbjct: 203 LPVLPKLGDLVMRILKLVPDLPRLRISSIDSIEVDDNLMRAIATEPRLMPHLHLSLQHGD 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+     A+
Sbjct: 263 DLMLKRMKRRHLRDDAIKFSEDARKLRPDMTFGADIIAGFPTETEAHFENSLKLVDDCAL 322

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
             L ++  +   GT   +M 
Sbjct: 323 TWLHVFPYSPRHGTPAARMP 342


>gi|302814840|ref|XP_002989103.1| hypothetical protein SELMODRAFT_235679 [Selaginella moellendorffii]
 gi|300143204|gb|EFJ09897.1| hypothetical protein SELMODRAFT_235679 [Selaginella moellendorffii]
          Length = 507

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 92/313 (29%), Gaps = 44/313 (14%)

Query: 33  PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSLIEP 86
            YCD  S+    + G+E+         +  ++     ++S +             S +  
Sbjct: 202 SYCDL-SNTPGIREGEEDTPDEEQRREEEKKKTKKSEAVSDVLSSGFSAIYRTNESGLRF 260

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++   L                   +P     +     R+     N I L VQS   + 
Sbjct: 261 ASLLKCLAETYPEMRFR-----FTSPHPKDFPDDLLLVMREQHNVCNSIHLPVQSGSSRV 315

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +     +  +   R I P +  S D I     +T       L    +   +  
Sbjct: 316 LERMRRGYTREAYLELVERIREIIPGVALSSDFIAGFCGETEEDHLQTLSIVETVGYEMA 375

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG-- 260
            ++  ++ + T  ++     D+    E V     +   +         Y    HS LG  
Sbjct: 376 YMFAYSMREKTPAHR----HDVDDVPEEVKQRRLSELIATFKRSSAARY----HSQLGKT 427

Query: 261 ------AESLHNLNYWRYGDYIGIGPGA-----HSRVKVGSHRVAISIEKHPESWLK-MV 308
                 A +  N N W           +      SR  V  H+    ++  P  ++   +
Sbjct: 428 QLVLIEAPNKRNPNEWGGR------CDSGQKVFFSRAPVPDHQSGDLVDTKPGDYVAVKI 481

Query: 309 RKNGHAVVEKEFL 321
                A +  E L
Sbjct: 482 LDTTFASLRGEPL 494


>gi|296132076|ref|YP_003639323.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296030654|gb|ADG81422.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 500

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 13/242 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C  N         +     + + E+     +   R +   +F    P+   P 
Sbjct: 199 CYGRCTFCYINPFYGAGSRWRGRSPDNIVAEID---GIIAERGVRDFYF--TDPNFFGPG 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                             +   IE   + +        R+AG+  I +G++S ++ SL+ 
Sbjct: 254 QRGQERALRLAALLKPRQIRFGIEGRVNDIHDETIAALREAGLRHILIGLESGKDSSLKR 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ--------WEMELQRALSYAV 199
           + +    ++   AI + R      +   I   P  T+             +L   L    
Sbjct: 314 MNKMTTVAQNEEAIRILRKNGLEPNVGFIMFEPDSTLEDIRGNFEFLLRNDLLHNLPVTA 373

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + L  +Q+ ++    F  + + G L L   +    +     +  +       +++N+ F 
Sbjct: 374 NVLYHHQIVLKGTPAFQHLQQQGRLQLERHSSYEGVALFADTQVAVLADLMRQVTNYLFN 433

Query: 260 GA 261
             
Sbjct: 434 RM 435


>gi|288927648|ref|ZP_06421495.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330482|gb|EFC69066.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 446

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 65/201 (32%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----FFGGGTPSL 83
           C   C YC   +        +   I S + +        G   + +      F GG    
Sbjct: 164 CDYFCTYC---TIPFARGFSRNPSIASLVQQAHDAANDGGKEIVLTGVNIGEFKGGG--- 217

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
              +    ++  + +   +      +IE  P+ +           +A +    + +QS  
Sbjct: 218 --NERFIDLVKALDQVEGIQRFRISSIE--PNLLTDELIDYCASSRAFMPHFHIPLQSGS 273

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R ++ +     + L +   P   +  D++     +    +E       S  +
Sbjct: 274 DEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVGSRGEEPAYFEECYDFLKSLDI 333

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   ++  
Sbjct: 334 SQLHVFPYSERPGTAALRIPY 354


>gi|238023830|ref|YP_002908062.1| Radical SAM domain-containing protein [Burkholderia glumae BGR1]
 gi|237878495|gb|ACR30827.1| Radical SAM domain protein [Burkholderia glumae BGR1]
          Length = 473

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C  KC +C +   V  ++    + +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSKCTFCLWPQTVGGHRYRVRS-VENVLAEVKWIRDNMP--EVKEIMFDDDTFTDFKPR 262

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +  +W+ ++   +              +  +  G+  + +G +S ++Q L
Sbjct: 263 VEEIARGLGRLGVSWSCNAKANVPYST---------LKIMKDNGLRLLLVGYESGDDQIL 313

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A       R +  ++    I  LP +T       +  A       + + 
Sbjct: 314 LNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETKDTIRKTIAYAKEINPHTIQVS 373

Query: 206 QLTIEKGTLFYKM 218
                 GT  Y+ 
Sbjct: 374 LAAPYPGTKLYEQ 386


>gi|237751475|ref|ZP_04581955.1| 2-methylthioadenine synthetase [Helicobacter bilis ATCC 43879]
 gi|229372841|gb|EEO23232.1| 2-methylthioadenine synthetase [Helicobacter bilis ATCC 43879]
          Length = 444

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 66/235 (28%), Gaps = 25/235 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     L +        G + I     ++   G   S 
Sbjct: 155 CDKKCAYC----IVPFTRGKEISIPFDLLYQEANKLVKNGVKEILLLGQNVNNYGVRFS- 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             P         + +   +     I     +P  +  +    +         I + +QS 
Sbjct: 210 -TPHEKIDFTTLLRELSKIDGLERIRFTSPHPLHMNDSFLDEFASNPKICKSIHIPLQSG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     +  I   +   P +    D+I   P +    ++  +    S  
Sbjct: 269 SNKILKSMKRGYTQEWYLDRIAYLKKQSPNVGISTDIIVGFPGENDDDFKETMSVLESVR 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D +  +  +    T          L     +       + +   +       EI
Sbjct: 329 FDTMYSFIYSPRPNT----------LSHSWGDKDSVPKEVAKERLAILQQRHREI 373


>gi|225460743|ref|XP_002268292.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 615

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ ++   T +    +     S  +  +G      + 
Sbjct: 198 CLGACTYCK-TKHARGHLGSYTVDSLVRRVRTVIADGVKEIWLSSEDTGAYGRDIGVTLP 256

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGV--------NRISLG 136
                 +L+ I           + I   NP  +     +  ++  V        + + + 
Sbjct: 257 I-----LLNAIVSELPPDGGTMLRIGMTNPPYI----LEHLKEMAVVLRHPCVYSFLHVP 307

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQS  +  L  + R +  +E    +     +    +++ D+I   P +T  ++   +   
Sbjct: 308 VQSGSDAILSAMNREYTVTEFRTVVDTLTELVPGMQIATDIICGFPGETDEEFAQTVSLI 367

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
             Y    + + Q     GT   +M
Sbjct: 368 QEYRFPQVHISQFYPRPGTPAARM 391


>gi|116751500|ref|YP_848187.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700564|gb|ABK19752.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 458

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 64/233 (27%), Gaps = 13/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C            +E        E+  +  L G R +  I             
Sbjct: 204 CPHSCTFC---LKAMYGHGMREKNAAQVAAEVALVGNL-GYRCVYFIDL---------EL 250

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +              S +    +     VE         +G   I  G++S    + R 
Sbjct: 251 CLKRHRTLELCGIMRRSRLPWACQTRVDDVEPELLGEMAASGCRLIHFGIESGASGTHRR 310

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +N + ++   A+  A+      +   +   P +T   W      A    + + S + +
Sbjct: 311 LRKNISVTQTENAVRWAKAAGIATAGFFLLGFPWETPKDWLATESLARRLNLTYASFHPV 370

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           T    T   +M         +   A       + I   + L    ++     G
Sbjct: 371 TPYPCTKLGEMLDLSGPWWENAGAARIDDARLKRIVLRYCLRPSYVAEFLRRG 423


>gi|254173487|ref|ZP_04880159.1| Fe-S oxidoreductase [Thermococcus sp. AM4]
 gi|214032179|gb|EEB73009.1| Fe-S oxidoreductase [Thermococcus sp. AM4]
          Length = 581

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 79/242 (32%), Gaps = 38/242 (15%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLI-------- 84
           C F +   RY+  ++  ++  + E++ +  L     +     G      S +        
Sbjct: 219 CSFCTEPVRYRKVEDRPVEDVVAEVKALYGLG----VRHFRVGRQSCIFSYMARPNGRVP 274

Query: 85  --EPQNIALILDGIAKNWT-----VSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISL 135
              P+ I  +  GI             N    + AN     V   +   K G   N ++ 
Sbjct: 275 VPNPEAIERLFAGIRSVAPEVKTLHVDNANPAVIANYPEESVRIAKALIKYGTPGNVVAF 334

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----------FDLIYALPKQTMT 185
           G++S + +  +    N  A E   A+ +   +  R             ++I+ LP +T  
Sbjct: 335 GLESADPKVAKLNNLNATAEETYEAVKILNEVGARRGYNGMPWLLPGINIIFGLPGETKK 394

Query: 186 QWEMELQRALSYAVD-----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +E+  Q       D      +++ Q+ +  GT  + M            +    + +  
Sbjct: 395 SYEITFQFLKRLLDDGLMVRRINIRQVVVFPGTPLWHMRSKVKTEKHKRLIQHYRHKIRH 454

Query: 241 SI 242
            I
Sbjct: 455 EI 456


>gi|302380317|ref|ZP_07268788.1| radical SAM domain protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311922|gb|EFK93932.1| radical SAM domain protein [Finegoldia magna ACS-171-V-Col3]
          Length = 302

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQN 88
           KC YCD N   +++KV     I+     ++  +     +  +        G    ++   
Sbjct: 32  KCIYCDLN-VGKKFKVFD---IEDVKKYIRDRKDFYEDKRFTPKKFTLLEGNALCLKNDY 87

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +  IL  I KN    +   ++  +    +     +     +  G++RI +G++S  +  L
Sbjct: 88  LTEILKEIKKN--FPNMKYVSCFSRSDDILRKTDDELLELKNLGLDRICVGIESGSDWVL 145

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
            +  +   + E + A+H   N+  + S  ++  L  +  +        +         + 
Sbjct: 146 SYHKKGVTSQEQLTALHRLDNLGIKYSVYIMLGLGGEAHSREHIMKTAEFLNKVNPFEIV 205

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +  L + K     +  ++ D    S    +    +     +   ++
Sbjct: 206 VVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIMLVENLNKRCIY 251


>gi|300192927|ref|NP_001177888.1| CDKAL1-like protein [Nasonia vitripennis]
          Length = 541

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 31/209 (14%)

Query: 28  CVKKCPYCDFNSHVR------RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C+ +C YC    H R      R +   +  IQ+F   ++ +       S  +  +G    
Sbjct: 211 CLNQCTYCK-TKHARGELGSYRPEEIIDRAIQAFKDGIKEL----WLTSEDTGAYGKDID 265

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--------VNRI 133
           + + P+ +  ++D I     +   +      NP  +     +   + G         + +
Sbjct: 266 TNL-PELLWKLIDVIPDKCRMRIGM-----TNPPYI----LEHLEEIGKILKHPKVYSFL 315

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            + VQS  ++ L  + R ++ S+    +   +   P ++   D+I   P +T   +E  +
Sbjct: 316 HIPVQSGSDRVLFDMKREYSRSDFENIVDFLKEKIPNINIATDVICGFPTETSEDFEETM 375

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                Y    L + Q    +GT   KM +
Sbjct: 376 SLCQKYKFSTLFINQFFPRQGTPAAKMIQ 404


>gi|288572815|ref|ZP_06391172.1| RNA modification enzyme, MiaB family [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288568556|gb|EFC90113.1| RNA modification enzyme, MiaB family [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 442

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 75/243 (30%), Gaps = 31/243 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--E 85
           C   C YC                 +  L E++ +    G R I          SL+   
Sbjct: 155 CDYFCTYC---IVPYVRGRFMSRDSEEILEEIRALVD-DGVREI----------SLLGQN 200

Query: 86  PQNIALILDGIAKNWTVSSNVEIT--------IEANPSSVEVNNFQGYRKAG--VNRISL 135
                   D   +   +  +V  T        + + P  +  +      +       I+L
Sbjct: 201 VDTYGADFDRSYRFADLLRDVAETDGVDLVRFMTSYPKDLTADVVSVMAEYPKICPGINL 260

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +QS  ++ L+ + R+++ +E    + + R   P +    DLI   P +T   +   ++ 
Sbjct: 261 PIQSGSDRILKSMNRHYSIAEYTETVRIIREGLPEVGLTSDLIVGFPGETEEDFMASMEA 320

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKD---GDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              +  D +     +   GT   KM       +       +     ++   I  A     
Sbjct: 321 VRQFRFDLVHTAAYSPRAGTPAAKMEDQLPDEEKFRRLSEINRLQSSIAMEINEATVGRR 380

Query: 251 YEI 253
           Y I
Sbjct: 381 YRI 383


>gi|225018910|ref|ZP_03708102.1| hypothetical protein CLOSTMETH_02861 [Clostridium methylpentosum
           DSM 5476]
 gi|224948316|gb|EEG29525.1| hypothetical protein CLOSTMETH_02861 [Clostridium methylpentosum
           DSM 5476]
          Length = 341

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC  N    R   G E +       ++  RQ        +I    G       Q
Sbjct: 70  CRRQCRYCGLN----RNNTGLERYRIQPAQMVETARQ-AWEAGYRTIVLQSGEDGYYTAQ 124

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  I K         + +  +   + V ++   R  G +R  L  ++ + Q    
Sbjct: 125 MLGEVVKEIKK-------TGMAVTLSCGELPVEDYAYLRACGADRYLLKHETADTQLYSS 177

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L         ++ +   + +        +  LP QT      +L        D   +   
Sbjct: 178 LHPCGTLENRVSCLREIKRLGYETGSGFMIGLPGQTEETIARDLLLLQELNCDMAGIGPF 237

Query: 208 TIEKGTLFYKMHK 220
                T       
Sbjct: 238 VPHPDTPLRDHPH 250


>gi|242020507|ref|XP_002430694.1| CDK5 regulatory subunit-associated protein, putative [Pediculus
           humanus corporis]
 gi|212515884|gb|EEB17956.1| CDK5 regulatory subunit-associated protein, putative [Pediculus
           humanus corporis]
          Length = 581

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 71/244 (29%), Gaps = 36/244 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGG-- 78
           C   C YC            +   I S L E++ +         L G    S        
Sbjct: 234 CDNMCTYC---IVPFTRGRERSRPIDSILEEVKILSDQGVKQITLLGQNVNSYRDIKSKE 290

Query: 79  -----GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS-----------SVEVNNF 122
                  P+++       +          S+ ++   E NP                +  
Sbjct: 291 YLSTFNEPTVV-ADGFKTVYKPKIGGVRFSTLLDKVSEVNPEMRIRFTSPHPKDFPDDVL 349

Query: 123 QGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYA 178
              ++     N I L +QS   Q L  + R +     I  +   R++ P +  S D+I  
Sbjct: 350 HLIKERKNICNFIHLPIQSGSNQVLERMRRGYTREAYIKLVENIRSLIPNIVLSTDIITG 409

Query: 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
              +T    E  ++         +  +  ++ + T  ++ +   +  +P E        +
Sbjct: 410 FCGETEKDHEDTMEMIRLIQYHQMYFFPYSMREKTTAHRRY---EDDVPQEVKMRRFQEV 466

Query: 239 TQSI 242
               
Sbjct: 467 GAEF 470


>gi|75676959|ref|YP_319380.1| 2-methylthioadenine synthetase [Nitrobacter winogradskyi Nb-255]
 gi|74421829|gb|ABA06028.1| 2-methylthioadenine synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 422

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C   F        +  +  +       +          +    +G   P    
Sbjct: 153 CDHRCTFCIIPFG-RGNSRSMPMDAVVDQVRVLTETGYAEIVLTGVDLTSYGADLPGGPR 211

Query: 86  PQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVE----VNNFQGYRKAGVNRISLGVQSL 140
              +   IL  + +   +  +   +IE +   ++               +  + L +QS 
Sbjct: 212 LGGLVRQILRQVPEMRRLRISSIDSIEVDRDLMDAIANEERL-------MPHLHLSLQSG 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R H   +AI      R + P      D+I   P +T   +   L       
Sbjct: 265 DDMILKRMKRRHARRDAIDFCAQVRRLRPDTAFGADIIAGFPTETDDMFARSLDLVAECD 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHK 220
           +  L ++  +   GT   +M  
Sbjct: 325 LTFLHVFPYSSRPGTPAARMPP 346


>gi|319789539|ref|YP_004151172.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1]
 gi|317114041|gb|ADU96531.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1]
          Length = 441

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 73/198 (36%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC     + + +    +   Q  L++++ + +      + +    G      E 
Sbjct: 153 CQLFCTYC----IIPKARGPMVSLPPQEALSQIKRLVEAGYKEIVLTGTHLGAYGREFEG 208

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
            ++A +++   K   +      ++E  P     +  +     +       + +QS  +  
Sbjct: 209 WSLARLVEEAVKIPGLYRLRLSSVE--PVEFTPHLIEVITGSEKVAPHYHVPLQSGSKSV 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  +GR +  S+    I       P   +  D++   P ++  ++   L+   S  + +L
Sbjct: 267 LERMGRRYTPSDYERVIEELVKRRPECCVGTDVMVGFPGESEEEFNETLEFIKSLPLGYL 326

Query: 203 SLYQLTIEKGTLFYKMHK 220
            ++  +  +GT+  ++  
Sbjct: 327 HVFPYSRRRGTVAARLRN 344


>gi|20807824|ref|NP_622995.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
 gi|81481565|sp|Q8RA52|RIMO_THETN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|20516384|gb|AAM24599.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 436

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 67/232 (28%), Gaps = 21/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     + + +     +    +  +    Q    + +  +       +     
Sbjct: 154 CSNACSFC----IIPKLRGK---YKSRKMENIIEEAQELARKGVKELIIIAQDTTKYGID 206

Query: 88  NIALIL--DGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               ++    + +   +     I +  A P SV     +  +     V  I + +Q   E
Sbjct: 207 LYKKLMLPQLLRELSKIEELKWIRLLYAYPDSVTDELIEEIKNNQKIVKYIDIPLQHSSE 266

Query: 143 QSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             L+ + R     +    I  L       M    +   P +T  ++E           + 
Sbjct: 267 SVLKRMNRGTTRRKIEEVISKLRSIPGMVMRTTFMVGFPGETEEEFEDLKNFIKEKRFER 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           + ++  + E+GT  Y M       +  +          + +       +YE 
Sbjct: 327 VGVFTYSREEGTKSYYMKPQIRKKVKLKRQ--------EELMEIQKQISYEF 370


>gi|332829284|gb|EGK01938.1| MiaB-like tRNA modifying enzyme [Dysgonomonas gadei ATCC BAA-286]
          Length = 436

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 8/198 (4%)

Query: 32  C-PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  +C F +        +   I+S + + Q +    G + I       G       +   
Sbjct: 159 CDYFCSFCTIPFARGRSRNGTIESMVKQAQEVAA-KGGKEIVLTGVNIGDFGRTTGETFF 217

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFL 148
            ++  + +   +      +IE  P+ +         K+        + +QS  +  L+ +
Sbjct: 218 DLIKALDEVDGIERYRISSIE--PNLLTDEIIDFVSKSKRFAPHFHIPLQSGSDAVLKLM 275

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            R ++ S     +   + I P   +  D+I     +T   +E   Q         L ++ 
Sbjct: 276 RRRYDTSLFRHKVEKIKAIMPDAFIGVDVIVGTRGETDEYFEETKQFLEGLDFSQLHVFT 335

Query: 207 LTIEKGTLFYKMHKDGDL 224
            +    T   K+  + D 
Sbjct: 336 YSERPNTQALKIEHEVDP 353


>gi|324991318|gb|EGC23251.1| TIGR01212 family radical SAM protein [Streptococcus sanguinis
           SK353]
          Length = 315

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +    + + +
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPDVRKYLVYFQNFTNT---HEKLEV 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +  +               + LG+Q+  E++   +
Sbjct: 102 IRERYEQAINEPGVVGLNIGTRPDCLPDDTISYLADLSERMHVTVELGLQTTYEETSDLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R + P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 162 NRAHSYELYVETVQRVRRLAPKAEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLH 221

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 222 LLHLMTNTRMQRDYHEGRLQLLSQEEYVSIVCDQLEIIPEHIVIH 266


>gi|239904942|ref|YP_002951680.1| cobalamin vitamin B12-binding domain/radical SAM domain protein
           [Desulfovibrio magneticus RS-1]
 gi|239794805|dbj|BAH73794.1| cobalamin vitamin B12-binding domain/radical SAM domain protein
           [Desulfovibrio magneticus RS-1]
          Length = 510

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFI-----QSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C  +C YC  D      +   G + ++     +  + E++ +R+         I      
Sbjct: 225 CPHRCAYCVND----AVKALYGAKGYLRWRGTEHVMAELETVRRTLPHIGYVWISDDAFF 280

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
                 + +  I +   +           +  +P+++          AG+  + +GVQ+ 
Sbjct: 281 -----ARPLEEIREFCRQWKARVGLPFTCL-GSPATITREKLDALTDAGLCYLQMGVQTG 334

Query: 141 EEQSLRFLGRNHNASEA-IAAIHLARNIFPRM---SFDLIYALPKQTMTQWEMELQRALS 196
             +      R    +   + A+ +      ++   S+D I   P +T+      ++    
Sbjct: 335 SARIQELFNRKAMGNAVMLKAMAVINAYKDKLLPPSYDFILDTPYETLADRLESVRFIAQ 394

Query: 197 Y-AVDHLSLYQLTIEKGTLFYKM 218
                 L  + L +  GT  + M
Sbjct: 395 IPKPFRLQPFSLVLYPGTKLHAM 417


>gi|148273204|ref|YP_001222765.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|229890480|sp|A5CSL5|MIAB_CLAM3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|147831134|emb|CAN02086.1| putative methylthioadenine synthetase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 528

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  +++  +     +  ++ L    ++     G    S     
Sbjct: 171 CNNTCTFC----IVPALRGKEKD--RRPGDILAEIQALVDDGAVEVTLLGQNVNSYGVEF 224

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +     +L        +          +P++   +      +    + ++ + +QS  
Sbjct: 225 GDRQAFGKLLRAAGAIEGLERIRF--TSPHPAAFTDDVIDAMAETPAVMPQLHMPLQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++ +   +  +   R   P   ++ D+I   P +T   ++  L+   +   
Sbjct: 283 DRVLKAMRRSYRSERFLGILDRVRTRIPDAAITTDIIVGFPGETEEDFQETLRVVEAARF 342

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +I  GT    M
Sbjct: 343 SSAFTFQYSIRPGTPAATM 361


>gi|303230349|ref|ZP_07317110.1| iron-only hydrogenase maturation rSAM protein HydE [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514888|gb|EFL56869.1| iron-only hydrogenase maturation rSAM protein HydE [Veillonella
           atypica ACS-049-V-Sch6]
          Length = 372

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 62/193 (32%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F      ++  M Q        SI    G        
Sbjct: 65  CIKNCNYCG----IRRENDKTERF-DMNREDIIKMAQWAYDHEYGSITLQSGE---RCDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                +  + ++     +  + I           ++   +AG +R  L +++  ++    
Sbjct: 117 VFVDYVVDLIRDIKAIGDGSLGITMCVGEQSEEAYRRMHEAGASRYLLRIETTNKELYHK 176

Query: 148 LGRN---HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      H+    +  +   R +  ++   ++  LP QT      ++       +D + +
Sbjct: 177 IHPRDELHSFETRVECLRRLRRVGFQVGTGVMIGLPGQTEEDLVNDILFYRDMDIDMIGM 236

Query: 205 YQLTIEKGTLFYK 217
               +   T   +
Sbjct: 237 GPYVVHHDTPLGQ 249


>gi|224372902|ref|YP_002607274.1| hypothetical protein NAMH_0871 [Nautilia profundicola AmH]
 gi|223589641|gb|ACM93377.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 408

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 74/191 (38%), Gaps = 13/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC   S     +   EN I      ++ ++ L+       +  G    S  +  
Sbjct: 137 CDFECAYCIIPSVRGHSRSLPENII------LEQIKTLSQNGISEFVLTGINMGSYGKDT 190

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQ 143
           N  ++ +++ I+K   V      ++E  PS ++        + G+    + + +Q   ++
Sbjct: 191 NTTLSELIEKISKIRGVKRIRLGSLE--PSQLD-ERLIELTQNGILEKHLHIALQHTSDR 247

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            LR + R +   + +       N    +  D I   P +T   W+  L+    Y + H+ 
Sbjct: 248 MLRIMKRRNRVKQTLELFENLANKGIALGTDFIVGHPGETEEIWQEALKNFKKYPLTHIH 307

Query: 204 LYQLTIEKGTL 214
           +++ T   GT 
Sbjct: 308 IFRFTPRDGTH 318


>gi|86749022|ref|YP_485518.1| radical SAM family protein [Rhodopseudomonas palustris HaA2]
 gi|86572050|gb|ABD06607.1| Radical SAM [Rhodopseudomonas palustris HaA2]
          Length = 591

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 84/242 (34%), Gaps = 25/242 (10%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + +++ +      +Q      I+   F        + 
Sbjct: 214 CPYQCSFCTIINVQGRKSRYRSADDVEALVR--ANWQQGVSKFFITDDNFARNK----DW 267

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  + +   +   + I ++     +  N  +  ++AGV R+ LG++S+  ++L 
Sbjct: 268 EAILDRLIWLKEEQGIPLGLMIQVDTLCHKI-PNFVEKSKRAGVTRVFLGLESINPENLL 326

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
              +  N      A+ LA      ++    I   P  T      +L        +D L  
Sbjct: 327 QAKKRQNKITEYRAMLLAWRAQGVITLAGYILGFPADTPQSILADLDIIKRELPIDILEF 386

Query: 205 YQLTIEKGT----LFYKMHKDGDLVLPSENVAVDL-------YNLTQSITSAHGLHAYEI 253
           + LT   G+      +K     D  L   ++               + I      H YE 
Sbjct: 387 FCLTPLPGSEDHQTLWKAGIAMDADLNKYDIEHVCTAHPKMSRQAWEDIYQQAWRHYYEP 446

Query: 254 SN 255
           ++
Sbjct: 447 AH 448


>gi|282600941|ref|ZP_05980225.2| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM
           15176]
 gi|282570102|gb|EFB75637.1| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM
           15176]
          Length = 465

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 16/206 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC      R     +     S L E+  + +      + +       PS     
Sbjct: 185 CNRRCAYC---VIPRARGPVRSREESSILQELHRLTEAGYKEIVLTAI---SLPSYGTDS 238

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  +++  A    V      ++  +P  +         +      +  L +QS  ++
Sbjct: 239 GTSLVELVEKAAAVPGVERLRLGSL--DPDMLHDEVILRLSRVKKLCPQFHLSLQSGCDK 296

Query: 144 SLRFLGRNHNASEAIAAIHLARNIF--PRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +LR + R +  ++        R+ F    +SF  D+I   P +T   +E  +        
Sbjct: 297 TLRAMRRPYTTAQFAKIADKLRHAFGAENVSFTTDVIVGFPGETEEDFEASMAFVTGQHF 356

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLV 225
             + ++  +  +GT  Y         
Sbjct: 357 LKVHVFPYSRREGTPAYDFPDQIPEH 382


>gi|329765663|ref|ZP_08257235.1| MiaB-like tRNA modifying enzyme [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137855|gb|EGG42119.1| MiaB-like tRNA modifying enzyme [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 422

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEME 190
           + + VQS  ++ L  + R H  +     +  AR  F    +S D+I   P +T   +E  
Sbjct: 248 LHIPVQSGSDKVLNDMRRGHTVNTFKEVVKKARERFADFTISTDIIVGFPSETREDFEKT 307

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            +     + D ++L + +   GT   + 
Sbjct: 308 FELLNETSPDIVNLSKYSARPGTEAAEW 335


>gi|317970572|ref|ZP_07971962.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. CB0205]
          Length = 461

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 15/205 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC   S   + +      I+  +  +       G + I+ +      +G   P 
Sbjct: 167 CNERCTYCVVPSVRGKEQSRLPEAIKLEMEGLAAQ----GFKEITLLGQNIDAYGRDLPG 222

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +    + D +     V     I     +P                      +  Q
Sbjct: 223 ITPEGRRQHTLTDLLQFVHDVEGIERIRFATSHPRYFTERLIDACADLPKVCEHFHVPFQ 282

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S ++  L+ + R +        I   R+  P   +S D+I A P +T  Q+   L     
Sbjct: 283 SGDDDVLKAMARGYTIDRYRRIIDRIRDRMPDASISADVIVAFPGETDAQYRRTLDLIDE 342

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD 221
              D ++    +    T        
Sbjct: 343 IGFDQVNTAAYSPRPNTPAADWPNQ 367


>gi|312890526|ref|ZP_07750062.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311296984|gb|EFQ74117.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 512

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 70/235 (29%), Gaps = 14/235 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C    +  RY       +   L  ++   Q+            G  P      
Sbjct: 238 CPFKCNWCAKPIYGSRYNSRSPEHVVKELKLLRDQYQM--DHIWFCDDIFGLKP------ 289

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
               +++          N    I+     + + +  +    +G +   +G +S  ++ L 
Sbjct: 290 --GWLIEFARLVKQEDLNFSYKIQTRADLLLQDDQIKALAASGCDNAWIGAESGSQRILD 347

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +     +   A  L +    + SF + +    +T     + +Q         + +  
Sbjct: 348 AMDKGTTIEQIYTATRLLKKNGIKPSFFIQFGYLGETREDIALTIQMINELLPYEIGISV 407

Query: 207 LTIEKGTLFYKMH---KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
                GT+FY+               +    +++ T        LH Y   N+  
Sbjct: 408 SYPLPGTVFYQKVKAAMQSKTNWTDSDEMALMFSNTYPPAFYKQLHRYVHQNYHK 462


>gi|302391921|ref|YP_003827741.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acetohalobium arabaticum
           DSM 5501]
 gi|302203998|gb|ADL12676.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acetohalobium arabaticum
           DSM 5501]
          Length = 450

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E   +S +  +  +++L           G    S     
Sbjct: 168 CNNFCTYC-----IVPYVRGREKS-RSSIDIVDEIKELADDGVKEVTLLGQNVNSY--GY 219

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++   +D       +     I     + ++P        +    +        L +QS  
Sbjct: 220 DLDRKIDFADLLEELDQIEGIERIRYMTSHPRDFTTKLIKTIADSNKVCEHFHLPIQSGS 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   E +A +   R+  P+  ++ D I   P +    +   L+       
Sbjct: 280 SRILEKMNRGYTQEEYLALVEEIRSYIPQAAITTDFIVGFPGERDEDFAETLKLVEEVEF 339

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    ++ +   GT   +M    +
Sbjct: 340 DMAYTFKYSQRSGTPAAEMEGQIE 363


>gi|293373214|ref|ZP_06619576.1| radical SAM domain protein [Bacteroides ovatus SD CMC 3f]
 gi|299149445|ref|ZP_07042502.1| radical SAM domain protein [Bacteroides sp. 3_1_23]
 gi|292631862|gb|EFF50478.1| radical SAM domain protein [Bacteroides ovatus SD CMC 3f]
 gi|298512632|gb|EFI36524.1| radical SAM domain protein [Bacteroides sp. 3_1_23]
          Length = 350

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S  + +   +Q       + +  GG  P  +   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLSRESILNCCKQGYELGFRTFVLQGGEDP-ALTND 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +  I + +      +  I  +        ++ + +AG NR  L  ++  E   R 
Sbjct: 117 QIEMTVARIRQEYP-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETYNELHYRQ 171

Query: 148 LGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   H A  +    +  +   + I  +    ++   P QT+     +L        + + 
Sbjct: 172 L---HPAEMSGKRRLQCLADLKEIGYQTGTGIMVGSPGQTVEHIIEDLLFIEKLRPEMIG 228

Query: 204 LYQLTIEKGTLFYKMH 219
           +        T F +  
Sbjct: 229 IGPFLPHHDTPFAEYP 244


>gi|10957541|ref|NP_051704.1| oxidative cyclase, putative [Deinococcus radiodurans R1]
 gi|6460970|gb|AAF12673.1|AE001827_11 oxidative cyclase, putative [Deinococcus radiodurans R1]
          Length = 512

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 86/252 (34%), Gaps = 40/252 (15%)

Query: 26  PF-------CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           PF       C  KC +C     +  + ++     +  + +FL ++    ++         
Sbjct: 217 PFSLRTSFGCKFKCRFCAGVPHWLDYRKKSPDRVQAELDAFLNQLGDQARI--------- 267

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE---ANPSSVEVNNFQGYRKAGVN 131
                  S +E +      + +A    +     I ++    + + +             +
Sbjct: 268 -------SFLEDEIFTRDPEHVAAITALLKERNIYLDGLYTHSTLLTPEIAADLCTV-AD 319

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
           R+  G+ + ++Q LR +G+       + A+  A+    ++  + I   P++T+      L
Sbjct: 320 RVFTGLDNADDQILRKMGKGQLLDTVLDAVEKAQAASLKVHLEWIIGTPEETLDTLVTSL 379

Query: 192 QRALSY----AVDHLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLY--NLTQSI 242
               +     AV+ ++ Y      GT +    K ++   L           Y    T ++
Sbjct: 380 STIFNLLSTHAVESINTYVYCPHPGTDYTVNAKKYRMRVLDTFDGIQESGGYPAFDTANL 439

Query: 243 TSAHGLHAYEIS 254
           T      AY +S
Sbjct: 440 TRNQIYTAYLMS 451


>gi|317968047|ref|ZP_07969437.1| 2-methylthioadenine synthetase [Synechococcus sp. CB0205]
          Length = 477

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C  +C +C     +   +  Q +  ++  + +   RQL        +     T +  ++ 
Sbjct: 172 CDYRCAFC----IIPHLRGDQRS--RTIESIVAEARQLAAQGVQELVLISQITTNYGLDL 225

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                + + +     V         A P+ +       YR     +  + L +Q      
Sbjct: 226 AGKPQLAELLRALGEVEIPWIRVHYAYPTGLTPEVLAAYRDVPNVLPYLDLPLQHSHPDV 285

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R   A      +   R   P        I   P +T  Q++  L        DH+
Sbjct: 286 LRAMNRPWQADVTNGVLARIREQLPDAVLRTTFIVGYPGETEEQFQHLLDFVAEQRFDHV 345

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            ++  + E+GT   ++   
Sbjct: 346 GVFTFSPEEGTPAAELPNQ 364


>gi|256396825|ref|YP_003118389.1| biotin synthase [Catenulispora acidiphila DSM 44928]
 gi|256363051|gb|ACU76548.1| biotin synthase [Catenulispora acidiphila DSM 44928]
          Length = 341

 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     +++     +                 G     
Sbjct: 77  CPEDCHFCSQSGLFPSPVRAAWLNIPELVEAA----KQTAATGATEFCIVAAVRG----- 127

Query: 84  IEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
             P     ++  + +    +   V+I + A+   +           GV+R +  +++   
Sbjct: 128 --PDE--RLMKQMREGVKAIQDAVDIQVAASLGMLTQEQVDDLADMGVHRYNHNLETARS 183

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
                +   H+  E    + + R+    +    I  +  +T+ Q      +  +   D +
Sbjct: 184 HFPNVVT-THSWEERWDTLTMVRDAGMEVCCGGIVGM-GETLEQRAEFAAQLAALTPDEV 241

Query: 203 SLYQLTIEKGTLFYKM 218
            L  L    GT F  M
Sbjct: 242 PLNFLNPRPGTPFGDM 257


>gi|332704282|ref|ZP_08424370.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554431|gb|EGJ51475.1| Radical SAM domain protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 478

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 17/190 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K+C +C  N  ++R K   +      + E++ ++   G    +          L+  +
Sbjct: 194 CNKECLFCTNNKSIQRQKNTDD-----IIREIEILKSTYGHEFCAYFQTPHF---LLSKK 245

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+                 + + + +   + +    AG   I +G +S     L+ 
Sbjct: 246 ELLKIIG----YRNRKDRFTWRTQTSVNYLSEEHIKLLYAAGARAIDVGFESASLSMLQR 301

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDL---IYALPKQTMTQWEMELQRALS--YAVDHL 202
           + +  + +E +  + +A +I   +   L   I     +T                +    
Sbjct: 302 MEKTKSPTEYLHQMKVALSIAADVGLRLKLNILLFAGETPETLLETANFLKDNLLSFHSF 361

Query: 203 SLYQLTIEKG 212
           S Y + I  G
Sbjct: 362 SAYPVMIYPG 371


>gi|295084759|emb|CBK66282.1| MiaB-like tRNA modifying enzyme [Bacteroides xylanisolvens XB1A]
          Length = 439

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 13/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  +   GT   K+       +    S+ +       TQ+  + H
Sbjct: 333 VFSYSERPGTQALKIEYVVSPEEKHQRSQRLLALSDQKTQAFYACH 378


>gi|256825582|ref|YP_003149542.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kytococcus sedentarius
           DSM 20547]
 gi|256688975|gb|ACV06777.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kytococcus sedentarius
           DSM 20547]
          Length = 510

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 138 LEALETFPSTLPTRRDSAYSGWVSISVGCNNTCTFC----IVPALRGKEKD--RRPGDIL 191

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPS 115
             +R L     +     G    +       +   + +L    +   +          +P+
Sbjct: 192 AEVRALVEQGVVEITLLGQNVNTYGVEFGDRQAFSKLLRACGEIEGLERVRF--TSPHPA 249

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    +  + + +Q+  ++ L+ + R++ + + +  +   R   P   +
Sbjct: 250 AFTDDVIDAMAETPNVMPSLHMPLQAGSDKVLKDMRRSYRSKKFLGILDRVREQIPHAAI 309

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + DLI   P +T   +   L+   +        +Q +I  GT   +M
Sbjct: 310 TTDLIVGFPGETEEDFAETLRVVEASRFSSAFTFQYSIRPGTPAAEM 356


>gi|152990825|ref|YP_001356547.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
 gi|151422686|dbj|BAF70190.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
          Length = 410

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 85/252 (33%), Gaps = 16/252 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     +   +    +  +S +  ++ +++L        I  G    S  + +
Sbjct: 140 CDFRCSYC----IIPYVRGNARSMDESLI--LEQIQKLASNGFGEFILTGTNVGSYGKDK 193

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK-AGVNRISLGVQSLEEQS 144
           +  +A +L  IA    V      +IE  P  +     +   +      + + +Q   +  
Sbjct: 194 DTSLAKLLKKIAMIRGVRRIRLGSIE--PIQITDEFKEILDEPWMAKHLHIALQHTSDTM 251

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L  + R +   E +       +    +  D I   P ++   +E   +    + + H+ L
Sbjct: 252 LEIMNRRNRVKEDLQLFEEIASHGYAIGTDFIVGHPGESEAIFEEAYENLKLFPLTHIHL 311

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
           +  +   GT    M           NVA + Y   Q +         +  +  ++  E  
Sbjct: 312 FTYSKRDGTPSASMKPHV-----LGNVAKERYKKIQELVKQKNFDFRKKQSDLYVLVEGE 366

Query: 265 HNLNYWRYGDYI 276
              +Y+ Y  + 
Sbjct: 367 KRGHYFGYDQFY 378


>gi|94989819|ref|YP_597919.1| radical SAM superfamily protein [Streptococcus pyogenes MGAS10270]
 gi|94543327|gb|ABF33375.1| Radical SAM superfamily protein [Streptococcus pyogenes MGAS10270]
          Length = 312

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 13/201 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     +   ++F   T +      + +
Sbjct: 49  CTFCTVSGSGDAIVAPDAPIKEQFYKEIDFMHRKWPDVNRYLVYFQNFTNT---HDTVDV 105

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++ R +
Sbjct: 106 IRDRYEQAINEPGVVGINIGTRPDCLPDDTIAYLVELSERMHVTVELGLQTTYEETSRLI 165

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R+  P ++    LI  LPK+T       ++R +    +  + L+
Sbjct: 166 NRAHSYDLYKETVRRLRHY-PNINIVSHLINGLPKETHDMMLENVRRCVTDNDIQGIKLH 224

Query: 206 QLTIEKGTLFYKMHKDGDLVL 226
            L +   T   + + +G L L
Sbjct: 225 LLHLMTNTRMQRDYHEGRLKL 245


>gi|282880437|ref|ZP_06289144.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella timonensis
           CRIS 5C-B1]
 gi|281305540|gb|EFA97593.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella timonensis
           CRIS 5C-B1]
          Length = 451

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 66/231 (28%), Gaps = 27/231 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C   C YC     +  Y  G+E       + ++ +R L           G    S     
Sbjct: 155 CNNFCHYC-----IVPYTRGRERSRD-IESILREVRDLRDKHYKEITLLGQNVNSYCFTV 208

Query: 84  ----------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VN 131
                     I    I            V         ++P  +  +      +      
Sbjct: 209 PERQLDNGETIAAHTIDFPQLLRRVAHEVPDIRIRFTSSHPKDMSDDTLHVIAEEPNVCK 268

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEM 189
            I L VQS   + L+ + R +     +  I   + I P   +S D+      +T    ++
Sbjct: 269 HIHLPVQSGSNKILKLMNRKYTVEWYMDRIRAIQRIIPDCGISTDIFVGYHGETEEDHQL 328

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            LQ   +   D   +++ +   GT   K        +P E     L  +  
Sbjct: 329 SLQLMRTVGYDSAFMFKYSERPGTYASK---HLPDNVPEEEKIRRLNEMIH 376


>gi|289432755|ref|YP_003462628.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT]
 gi|288946475|gb|ADC74172.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT]
          Length = 416

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 14/225 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   F   VRRYK  +   +   ++E+   +       + +    G   S   
Sbjct: 137 CDNFCTYCIVPF---VRRYKNCRG--VDDIISEINLRQAEGYQEIVLTGTEIGEYTS--S 189

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQS 144
             N+A +++ I +   +      +++  P+ + +     ++     N   + +QS  ++ 
Sbjct: 190 GFNLAGLIEAILERTRIPRLRLSSLQ--PNEITLPLLALWKNRRLCNHFHMALQSGSDRI 247

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R+++ ++    +   R   P ++   D I   P +T   +   L+         +
Sbjct: 248 LGLMNRSYSLTDYTRTLEAIRRQIPDVAVTTDTIVGFPGETDEDFACSLKYVEQAGFARV 307

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
             +  +   GT+  ++    D V+    ++  +     +      
Sbjct: 308 HPFPYSERPGTMASQLTDKVDPVVIKTRLSGMMLAAKNASLEYRH 352


>gi|167040267|ref|YP_001663252.1| MiaB-like tRNA modifying protein YliG [Thermoanaerobacter sp. X514]
 gi|256750808|ref|ZP_05491693.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914351|ref|ZP_07131667.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter sp. X561]
 gi|307724413|ref|YP_003904164.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter sp. X513]
 gi|238064963|sp|B0K1C1|RIMO_THEPX RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|166854507|gb|ABY92916.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter sp. X514]
 gi|256750391|gb|EEU63410.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889286|gb|EFK84432.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter sp. X561]
 gi|307581474|gb|ADN54873.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter sp. X513]
          Length = 436

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 79/243 (32%), Gaps = 26/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     + R +     +    + ++    +    + +  +       +     
Sbjct: 154 CSNACSFC----IIPRLRG---RYRSRKMEDILREAEELVKKGVKELILIAQDTTKYGVD 206

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   +       + A P SV     +  +     V  I + +Q  
Sbjct: 207 VYKKFMLPQLLKEISKIDGLKWIR--LLYAYPDSVTEELVEEIKNNEKIVKYIDIPLQHS 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ + RN N  +    I   R+I +  +    +   P +T  ++E   Q       
Sbjct: 265 HDEVLKRMNRNTNKQKIEEVISRLRSIPYMVIRTTFMVGFPGETEEEFEDLKQFVKEKRF 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + + ++  + E+GT  Y M          ++V +        I            N S +
Sbjct: 325 ERVGVFTYSREEGTKSYYMKPQIK-----KSVKIKRQQELMEIQKEISYQH----NLSKV 375

Query: 260 GAE 262
           G +
Sbjct: 376 GKQ 378


>gi|116750352|ref|YP_847039.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699416|gb|ABK18604.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 497

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 68/191 (35%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   +  +K   ++  +  + E++  R+L     +   FF   T +    +
Sbjct: 216 CPARCSFCLWPQTIGGHKYRAKSP-EVVIREVEEGRELFP--QVREWFFDDDTFTANPGR 272

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +   +    K   +  +      A+   +     +  R+ G+  + +G +S  ++ L  
Sbjct: 273 AVE--ISKGMKRLGLRWSC--NARADVDYIT---LKALRQNGMRLVVVGFESGNQRILDR 325

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      +   +     +  ++    I  LP +T    E  ++ A       + +   
Sbjct: 326 VRKGITLQRSRQFMKNCHELGIKVHGTFIIGLPIETRETIEETIRFAQELDPYAIQVSLA 385

Query: 208 TIEKGTLFYKM 218
               GT  Y+ 
Sbjct: 386 APFPGTELYQQ 396


>gi|294676663|ref|YP_003577278.1| MiaB family RNA modification enzyme [Rhodobacter capsulatus SB
           1003]
 gi|294475483|gb|ADE84871.1| RNA modification enzyme, MiaB family [Rhodobacter capsulatus SB
           1003]
          Length = 439

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPS 82
           C K   +C F              +   LTE + +    G R I+ +      + G  P 
Sbjct: 159 CDK---FCAFCVVPYTRGAEISRPVARILTEAEKLVA-KGVREITLLGQNVNGYHGDGPD 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  ++  +A+   +      T  ++P+ +  +    +      +  + L VQS 
Sbjct: 215 --GSWGLGRLVRALARIDGLDRIRYTT--SHPNDMAEDLIAAHGDEPKLMPYLHLPVQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H A + +  +   R   P   +S D I   P +T    +  L    +  
Sbjct: 271 SDPILKAMNRKHTAEDYLRLVERLRAARPDLVLSSDFIVGFPGETEADHQASLDLIRAVG 330

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
                 ++ +   GT     
Sbjct: 331 FGAAFSFKYSPRPGTPAASR 350


>gi|254479101|ref|ZP_05092453.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium
           pacificum DSM 12653]
 gi|214034950|gb|EEB75672.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium
           pacificum DSM 12653]
          Length = 436

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 67/232 (28%), Gaps = 21/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     + + +     +    +  +    Q    + +  +       +     
Sbjct: 154 CSNACSFC----IIPKLRGK---YKSRKMENIIEEAQELARKGVKELIIIAQDTTKYGID 206

Query: 88  NIALIL--DGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               ++    + +   +     I +  A P SV     +  +     V  I + +Q   E
Sbjct: 207 LYKKLMLPQLLRELSKIEELKWIRLLYAYPDSVTDELIEEIKNNEKIVKYIDIPLQHSSE 266

Query: 143 QSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
             L+ + R     +    I  L       M    +   P +T  ++E           + 
Sbjct: 267 SVLKRMNRGTTRRKIEEVISKLRSIPGMVMRTTFMVGFPGETEEEFEDLKNFIKEKRFER 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           + ++  + E+GT  Y M       +  +          + +       +YE 
Sbjct: 327 VGVFTYSREEGTKSYYMKPQIRKKVKLKRQ--------EELMEIQKQISYEF 370


>gi|212691074|ref|ZP_03299202.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855]
 gi|237712425|ref|ZP_04542906.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237726616|ref|ZP_04557097.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265752128|ref|ZP_06087921.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA]
 gi|212666306|gb|EEB26878.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855]
 gi|229435142|gb|EEO45219.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229453746|gb|EEO59467.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263236920|gb|EEZ22390.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA]
          Length = 438

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I+  + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGRIEEIVEQARQAAA-EGGKEIVITGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +   +  A +    + +QS  +  L
Sbjct: 215 SFFDLVKALDQVAGIERYRISSIE--PNLLTDEIIEYVSRSRAFMPHFHIPLQSGSDDVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + I   R I P   +  D+I     +T   +E          V  L 
Sbjct: 273 KLMRRRYDTALFASKIRKIREIMPNAFIGVDVIVGTRGETEEYFEDAYHFIEGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFTYSERPGTQ 343


>gi|85859266|ref|YP_461468.1| tRNA 2-methylthioadenosine synthase [Syntrophus aciditrophicus SB]
 gi|123725257|sp|Q2LT94|MIAB_SYNAS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|85722357|gb|ABC77300.1| tRNA 2-methylthioadenosine synthase [Syntrophus aciditrophicus SB]
          Length = 461

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 16/227 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C   C YC            +    +  + E++ +    G + ++ +  G    S     
Sbjct: 172 CNNFCSYC---IVPYVRGREESRPPEDIIHEIRMLADH-GVKEVTLL--GQNVNSYARKT 225

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                 A +L  I K   +      T  ++P  +       +       + I L  QS  
Sbjct: 226 SGEMGFAELLREIEKIKGIERMRFTT--SHPKDLSEFLITAFSDLSKLCHHIHLPFQSGS 283

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R +  S+ +A +   R + P +S   D+I   P ++   ++  +        
Sbjct: 284 DRILALMNRGYTKSDYLAKVERLRTVCPDISITADVIVGFPGESDEDFKETIDMMNQIRF 343

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           D+L  ++ +  +GT   KM       L  E + +      Q     +
Sbjct: 344 DNLFSFKYSEREGTAAVKMDGKVSEPLKLERLQILQALQEQHTLEKN 390


>gi|251781839|ref|YP_002996141.1| Fe-S oxidoreductase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242390468|dbj|BAH80927.1| Fe-S oxidoreductase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 313

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVKQYLVYFQNFTNT---HDKVEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +         +        + LG+Q+  E++   +
Sbjct: 100 IRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAEVAERMHVTVELGLQTTYEKTSEMI 159

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+       +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 160 NRAHSYDLYKEMVKRLRQYPKIEIVSHLINGLPGETHEMMLENVRRCVTDNDIQGIKLHL 219

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   + + +G L L S+   V +      I   H +  
Sbjct: 220 LHLMTNTRMQRDYHEGRLQLLSQEDYVSIICDQLEIIPKHIVIH 263


>gi|256810745|ref|YP_003128114.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
 gi|256793945|gb|ACV24614.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
          Length = 357

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 65/204 (31%), Gaps = 12/204 (5%)

Query: 82  SLIEPQNIALILDGI--AKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVN-RISLGV 137
           S ++ + ++  +      K     +  E+ IE+    ++    +  RK   VN  I +G+
Sbjct: 111 SFLDDREVSKEVRVYIIKKLSEFDNLKEVAIESRAEFIDEEKLKEIRKYLNVNVEIGVGI 170

Query: 138 QSLEEQSL-RFLGRNHNASEAIAAIHLARNIFPRM----SFDLIYALPKQTMTQWEMELQ 192
           +S  E+   + + +     + I AI LA      +        ++   K+ +        
Sbjct: 171 ESFNEEIREKAINKGITNEQIIKAIELAEKYNIGIKAYLFIKPLFITEKEAIEDAIYSAN 230

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +      +S    T+ KG+L            P       +  + + +   +      
Sbjct: 231 KCIELGCSRISFCPATVHKGSLMEYFFNKNQYRPPFL---WSIIEILKEVKENNPNALIM 287

Query: 253 ISNHSFLGAESLHNLNYWRYGDYI 276
                       HN+   R    I
Sbjct: 288 CDTSGVGSERGAHNIYGCRCNKII 311


>gi|170289680|ref|YP_001736496.1| 2-methylthioadenine synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170173760|gb|ACB06813.1| 2-methylthioadenine synthetase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 432

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 15/208 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            P    C+  C YC   + + R  +    + N ++     ++         S  +  +G 
Sbjct: 136 IPIAEGCMGACTYC--ITRLARGGLTSFPKRNILRLAEHFLRKGAVELWLTSEDTAAYGR 193

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGV 137
                +      LI+D           V +   ++   +       YR   V     L V
Sbjct: 194 D----MGENLANLIMDLSDLPGDFRIRVGMMTPSSALPILSELIGAYRSRKVYKFFHLPV 249

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L  +GRN+   + ++ +   R     +S   D+I   P +    +E  L    
Sbjct: 250 QSGSDRVLEDMGRNYTVDQFLSMVDFIRKELSDVSIATDIIVGFPTEDEEDFESTLAILE 309

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               D +++ +     GT    M K  D
Sbjct: 310 RLKPDVVNVSKFGARPGTKAASMRKLPD 337


>gi|113866557|ref|YP_725046.1| 2-methylthioadenine synthetase [Ralstonia eutropha H16]
 gi|123134407|sp|Q0KE93|MIAB_RALEH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|113525333|emb|CAJ91678.1| 2-Methylthioadenine synthetase [Ralstonia eutropha H16]
          Length = 450

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F            Q         +++++     G  +
Sbjct: 156 CSKYCSYC--VVPYTRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYRGKMGDTT 213

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+++ +A+   +      T  ++P        + Y +    VN + L VQ  
Sbjct: 214 --EIADFALLIEYVAEIPGIERIRYTT--SHPKEFTSRLVELYGRCDKLVNHLHLPVQHA 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R ++  E  + I   R + P MS   D I   P +T   +E  +       
Sbjct: 270 SDRILMAMKRGYSVLEYKSIIRKLRVLRPDMSMSSDFIVGFPGETDADFEKLMAMIEEIG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D    +  +   GT    +H
Sbjct: 330 YDTSFSFIFSPRPGTPAANLH 350


>gi|253579606|ref|ZP_04856875.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849107|gb|EES77068.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 558

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 25/262 (9%)

Query: 108 ITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E +   +     Q     + G+ ++ +GVQS    +++ + R  +  +    +    
Sbjct: 255 FHFEISADLLREEELQEMSTMRPGLIQLEIGVQSTNPDTIKAIHRTMDFEKLKGIVDRIH 314

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM------ 218
           +        DLI  LP +    +        +     L L  L + KG+   +M      
Sbjct: 315 SFGNIHQHLDLIAGLPYEDYDSFRNSFNDVYALKPQQLQLGFLKVLKGSHMMEMCREYGI 374

Query: 219 -HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL------NYWR 271
            +K  +         +D  ++ +  T  + +  Y  S       E L N        Y R
Sbjct: 375 VYKTQEPYEVLSTKWLDYDHVLKLKTVENMVEVYYNSGQFQNTLEYLENFFPDAFSIYER 434

Query: 272 YGDYIGI-GPGAHSRVKVGSHRVAIS-IEKHPESWLKMVRKN-GHAVVEKEFL------S 322
            G +    G G  S  ++  + + +  +E  PE  +  V+    + +  +E L      +
Sbjct: 435 LGSFYMEKGYGDVSHTRMRRYEILLEFLEDMPEISVDQVKDQMVYDLYLRENLKSRPGFA 494

Query: 323 SEQQADEFLMMGLRLREGISVK 344
            +Q+  E  +   R RE ++  
Sbjct: 495 RDQKPFERQIWDFRKREKVAKN 516


>gi|228470355|ref|ZP_04055259.1| biotin synthase [Porphyromonas uenonis 60-3]
 gi|228308098|gb|EEK16973.1| biotin synthase [Porphyromonas uenonis 60-3]
          Length = 349

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 23/195 (11%)

Query: 28  CVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC   S    V RY++  +  + +     +      G R+   +  GG  P   
Sbjct: 65  CRNDCYYCGIRSGNERVTRYRLTADEVMSACERGYE-----IGFRTF--VLQGGEDP-YW 116

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  ++  I  ++      E  I  +   +E   ++    AG NR  L  ++ +++ 
Sbjct: 117 RGERLVSLVRNIRTSYP-----ECAITLSLGEMEYAEYEALFHAGANRYLLRHETYDKEH 171

Query: 145 LRFLGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L   H ++ A    + A+   + I  ++   ++   P QT      +L         
Sbjct: 172 YESL---HPSTMAQEHRLQALRDLKQIGYQVGTGVMIGSPGQTTAHLAQDLDFIHRLQPA 228

Query: 201 HLSLYQLTIEKGTLF 215
            + +      + T  
Sbjct: 229 MIGVGPFIPHEDTPL 243


>gi|229815354|ref|ZP_04445689.1| hypothetical protein COLINT_02400 [Collinsella intestinalis DSM
           13280]
 gi|229809134|gb|EEP44901.1| hypothetical protein COLINT_02400 [Collinsella intestinalis DSM
           13280]
          Length = 445

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 72/229 (31%), Gaps = 23/229 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C + C +C       RY       I      +  +R L        +  G   G   +  
Sbjct: 150 CDRYCSFCAIPYIRGRYHSRSAESI------LSEVRDLVAGGVREIVLIGQDTGIWGTDF 203

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           + +     N+A ++  +A+           +   P  +        R     +  I + V
Sbjct: 204 KDEVDGPTNLAQLMIAVAEAVRPEHVWIRVLYLQPEGMTDELIAAIRDTPEVLPYIDIPV 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL--IYALPKQTMTQWEMELQRAL 195
           Q    + L+ + R+ +A +        R   P M      +   P +T  +    L    
Sbjct: 264 QHCNARVLKAMHRSGSAEQLSDLFAKLRAEIPAMVIRTTSLVGFPGETDDEAAEMLAFMD 323

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
               D+ S++  + E+GT   KM    D     E+V ++       +  
Sbjct: 324 REGFDYTSVFPYSQEEGTFAAKMDGQVD-----EDVKLERTQAAMDLAE 367


>gi|145220029|ref|YP_001130738.1| MiaB-like tRNA modifying enzyme YliG [Prosthecochloris vibrioformis
           DSM 265]
 gi|238066480|sp|A4SFH7|RIMO_PROVI RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|145206193|gb|ABP37236.1| SSU ribosomal protein S12P methylthiotransferase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 434

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C   S  R     +  +I   L ++    +L   + +  +       +L    
Sbjct: 146 CSRSCSFC---SIPR----IRGPYISQPLDQLLREARLLQEKGVQELNIIAQDITLYGVD 198

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + D + +   ++ +    + A P +  +   +   + G   N + L +Q   ++
Sbjct: 199 LYGRQMLNDLLLRLSDMAFHWIRLLYAYPLNFPLEVIETMSQRGNICNYLDLPLQHCNDR 258

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R       +A I   R   P +     +I   P +T  ++E  L+ A +   D 
Sbjct: 259 ILRSMNRGITKEGELALIEAIRQKNPDIRLRTTMIAGYPGETRQEFEELLEFAATVRFDR 318

Query: 202 LSLYQLTIEKGTL 214
           L  +    E+ + 
Sbjct: 319 LGCFSYCHEEFSP 331


>gi|320457927|dbj|BAJ68548.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 480

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 155 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 211

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 212 QCVAGGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 264

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 265 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIREAMPDAQ 324

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 325 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 384

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 385 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 417


>gi|307748320|gb|ADN91590.1| Ribosomal protein S12 methylthiotransferase rimO [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315930962|gb|EFV09937.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 439

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 73/200 (36%), Gaps = 19/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C +KC +C   S   + K  +   I S + E+   + L         F    T S +   
Sbjct: 146 CNQKCSFCAIPSFKGKLKSRE---ISSIVAEL---KDLVARGYKDFSFIAQDTSSYLFDK 199

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            E   +  ++D + K   +       +   P+S      +     +  VN   + +Q + 
Sbjct: 200 GEKDGLIRLIDEVEKIKGI--RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHIS 257

Query: 142 EQSLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +  L+ + R  N     E +  +  A N F R     I   P ++   +E   +    + 
Sbjct: 258 DNMLKIMKRGANNTRLKEMLNLMKSAPNSFLRTG--FIVGHPGESEADFEELCEFVKDFG 315

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D +S++  + E+ T  + M
Sbjct: 316 FDRISVFAYSKEEDTAAFDM 335


>gi|213691832|ref|YP_002322418.1| RNA modification enzyme, MiaB family [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|229890433|sp|B7GQG0|MIAB_BIFLI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|213523293|gb|ACJ52040.1| RNA modification enzyme, MiaB family [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 484

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 159 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 215

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 216 QCVAGGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 268

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 269 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIREAMPDAQ 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 329 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 388

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 389 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 421


>gi|160886570|ref|ZP_02067573.1| hypothetical protein BACOVA_04581 [Bacteroides ovatus ATCC 8483]
 gi|260173331|ref|ZP_05759743.1| biotin synthase [Bacteroides sp. D2]
 gi|315921604|ref|ZP_07917844.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108455|gb|EDO10200.1| hypothetical protein BACOVA_04581 [Bacteroides ovatus ATCC 8483]
 gi|313695479|gb|EFS32314.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 350

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S  + +   +Q       + +  GG  P  +   
Sbjct: 62  CRNNCYYCG----IRKGNPNIERYRLSRESILNCCKQGYELGFRTFVLQGGEDP-ALTND 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I + +  I + +      +  I  +        ++ + +AG NR  L  ++  E   R 
Sbjct: 117 QIEMTVARIRQEYP-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETYNELHYRQ 171

Query: 148 LGRNHNASEA----IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L   H A  +    +  +   + I  +    ++   P QT+     +L        + + 
Sbjct: 172 L---HPAEMSDKRRLQCLADLKEIGYQTGTGIMVGSPGQTVEHIIEDLLFIEKLRPEMIG 228

Query: 204 LYQLTIEKGTLFYKMH 219
           +        T F +  
Sbjct: 229 IGPFLPHHDTPFAEYP 244


>gi|322691385|ref|YP_004220955.1| hypothetical protein BLLJ_1196 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456241|dbj|BAJ66863.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 480

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 155 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 211

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 212 QCVADGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 264

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 265 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQ 324

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 325 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 384

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 385 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 417


>gi|291516737|emb|CBK70353.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bifidobacterium longum
           subsp. longum F8]
          Length = 484

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 159 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 215

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 216 QCVADGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 268

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 269 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQ 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 329 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 388

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 389 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 421


>gi|189439139|ref|YP_001954220.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Bifidobacterium longum DJO10A]
 gi|227547646|ref|ZP_03977695.1| possible tRNA 2-methylthioadenine synthetase [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|239621252|ref|ZP_04664283.1| RNA modification enzyme [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312132572|ref|YP_003999911.1| miab [Bifidobacterium longum subsp. longum BBMN68]
 gi|229890432|sp|B3DQX6|MIAB_BIFLD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|189427574|gb|ACD97722.1| 2-methylthioadenine synthetase [Bifidobacterium longum DJO10A]
 gi|227211901|gb|EEI79797.1| possible tRNA 2-methylthioadenine synthetase [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|239515713|gb|EEQ55580.1| RNA modification enzyme [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|311773512|gb|ADQ03000.1| MiaB [Bifidobacterium longum subsp. longum BBMN68]
          Length = 484

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 159 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 215

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 216 QCVADGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 268

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 269 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQ 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 329 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 388

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 389 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 421


>gi|188585813|ref|YP_001917358.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350500|gb|ACB84770.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 446

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 68/193 (35%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +    +  ++E+ Q +        ++ I  G       E 
Sbjct: 165 CDQFCSYC---IIPYARGHLRSRPPEDVISEIKQAVSNGFKEIVLTGINLGAYG---REN 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQ 143
            N+  +   + K   +  +  I +    P  + +   +     +     + + +QS + +
Sbjct: 219 SNLPNLATLLDKIIHLKGDYRIRLSSCEPQEITIGLLELVTNSEKICKHLHIPLQSGDNE 278

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R+++  +    +  AR   P ++   D+I   P ++   +    +         
Sbjct: 279 ILKAMNRDYSKEDYRKIVMAAREKSPSIAITTDIIVGFPGESANHFRNTKEFVKKIGFSD 338

Query: 202 LSLYQLTIEKGTL 214
           + ++Q +  K T 
Sbjct: 339 IHIFQYSPRKNTP 351


>gi|23465968|ref|NP_696571.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Bifidobacterium longum NCC2705]
 gi|317482468|ref|ZP_07941485.1| MiaB family RNA modification enzyme [Bifidobacterium sp.
           12_1_47BFAA]
 gi|81753721|sp|Q8G4H4|MIAB_BIFLO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|23326682|gb|AAN25207.1| widely conserved hypothetical protein in upf0004 [Bifidobacterium
           longum NCC2705]
 gi|316916128|gb|EFV37533.1| MiaB family RNA modification enzyme [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 480

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 88/273 (32%), Gaps = 23/273 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +    ++ +  +V     C   C +C            ++      L E++
Sbjct: 155 EQLRQFPSQLPAARASRISSWVAISVGCNNTCTFC---IVPTTRGKEKDRRPGDILDEIR 211

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L        +          +P
Sbjct: 212 QCVADGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHP 264

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 265 AAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQ 324

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  +             +  +   GT    M       +    
Sbjct: 325 ISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRF 384

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +      +T+   +       E+     LG 
Sbjct: 385 DRLVALQEQITEENLATFEGRDVEVMITGKLGK 417


>gi|329964945|ref|ZP_08301953.1| iron-only hydrogenase maturation rSAM protein HydE [Bacteroides
           fluxus YIT 12057]
 gi|328524586|gb|EGF51654.1| iron-only hydrogenase maturation rSAM protein HydE [Bacteroides
           fluxus YIT 12057]
          Length = 373

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 17/193 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     NSH+ RY + QE  +       +            +    GG    I
Sbjct: 90  CRNNCYYCGIRKGNSHIPRYGLSQEEILACCRDGYRL--------GFRTFVLQGGEAPDI 141

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +   +  I + +      +  I  +        +  + +AG NR  L  ++  E+ 
Sbjct: 142 RDEWVVETVASIRREFP-----DCAITLSLGEKSREAYLRFFRAGANRYLLRHETYNEEH 196

Query: 145 LRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            R L     + +  +  +   +    +    ++   P QT+     ++     +  + + 
Sbjct: 197 YRKLHPEEMSLNHRLQCLDWLKKTGYQTGTGIMVGSPYQTVDHLVEDILYIERFCPEMIG 256

Query: 204 LYQLTIEKGTLFY 216
           +        T F 
Sbjct: 257 IGPFLPHHDTPFA 269


>gi|314966778|gb|EFT10877.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL082PA2]
          Length = 492

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 76/230 (33%), Gaps = 33/230 (14%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQEN---------- 50
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +          
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 51  --FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
              +   + E+  + Q      +     G            A +L        +      
Sbjct: 197 RALVDEGVQEITLLGQNVNSYGVQFGDRGA----------FAKLLRACGNIDGLERVRF- 245

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
               +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R 
Sbjct: 246 -TSPHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVRE 304

Query: 167 IFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             P   ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 305 AIPHAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|314923002|gb|EFS86833.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL001PA1]
          Length = 492

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 76/230 (33%), Gaps = 33/230 (14%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQEN---------- 50
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +          
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 51  --FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
              +   + E+  + Q      +     G            A +L        +      
Sbjct: 197 RALVDEGVQEITLLGQNVNSYGVQFGDRGA----------FAKLLRACGNIDGLERVRF- 245

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
               +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R 
Sbjct: 246 -TSPHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVRE 304

Query: 167 IFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             P   ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 305 AIPHAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|303246488|ref|ZP_07332767.1| RNA modification enzyme, MiaB family [Desulfovibrio fructosovorans
           JJ]
 gi|302492198|gb|EFL52073.1| RNA modification enzyme, MiaB family [Desulfovibrio fructosovorans
           JJ]
          Length = 446

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 64/200 (32%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYC--DFNS--HVRRYKVGQENFIQSFL-TEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC   F       R         ++      + +  L    +   +   G   S
Sbjct: 155 CDNFCAYCIVPFVRGRQKSRGLPAVVAECEALAGRGAREITLLGQNVNSYGLDASGDGTS 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                  A +LD +A    ++     T  ++P  +  +    +         + L VQS 
Sbjct: 215 F------ARLLDAVATIPGIARIRFTT--SHPKDLSDDVVARFADLPELCPALHLPVQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  +GR ++ +  +  +   R   P ++   DLI   P +T   +   L       
Sbjct: 267 SDAVLTRMGRRYDRAAYLRLVDKLRRARPGIALTTDLIVGFPGETDDDFRRTLDLVREVG 326

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D    +      GT+  +M
Sbjct: 327 FDSGFSFMYCDRPGTVSERM 346


>gi|282854035|ref|ZP_06263372.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           J139]
 gi|282583488|gb|EFB88868.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           J139]
 gi|314981113|gb|EFT25207.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL110PA3]
 gi|315091939|gb|EFT63915.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL110PA4]
 gi|315093305|gb|EFT65281.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL060PA1]
 gi|315103440|gb|EFT75416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL050PA2]
 gi|327327604|gb|EGE69380.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL103PA1]
          Length = 492

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 76/230 (33%), Gaps = 33/230 (14%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQEN---------- 50
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +          
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 51  --FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI 108
              +   + E+  + Q      +     G            A +L        +      
Sbjct: 197 RALVDEGVQEITLLGQNVNSYGVQFGDRGA----------FAKLLRACGNIDGLERVRF- 245

Query: 109 TIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN 166
               +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R 
Sbjct: 246 -TSPHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVRE 304

Query: 167 IFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             P   ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 305 AIPHAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|153940621|ref|YP_001391704.1| RNA modification protein [Clostridium botulinum F str. Langeland]
 gi|238065366|sp|A7GFZ4|RIMO_CLOBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|152936517|gb|ABS42015.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           Langeland]
 gi|295319732|gb|ADG00110.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           230613]
          Length = 445

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +Y+  ++   ++ L E++ + +      +  I       ++    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRKK---ENILKEVENLAKQG----VKEIILIAQDTTMYGID 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 209 IYGKKVLHELLRDISKVEGVKWIR--LLYCYPEEITKELIEEIKNNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIIDIIKKLRKEIEGITLRTSLIVGFPGETEGEFSELKEFVSDVK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT      +   +       E + +   ++++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREEEIMILQQSISKDINKEKIGKIYEV 384


>gi|310779131|ref|YP_003967464.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748454|gb|ADO83116.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
          Length = 552

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 80/225 (35%), Gaps = 25/225 (11%)

Query: 28  CVKKCPYC--DFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  +C YC    +  VR +  +  +E+  +     +  ++ +    +I    +       
Sbjct: 184 CPFECSYCMSSLDKSVRYFSLERVKEDLKKFLQEGITLIKFVDRTFNIDKRRY------- 236

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLE 141
                   +L+   +  T         E +    +        K   G  +  +GVQ++ 
Sbjct: 237 --MDLWKFLLENYREEVTF------HFEISGDLFDEETIAFLEKIPQGFFQFEIGVQTIN 288

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           E++++ + R ++       +   +     +  DLI  LP +    ++       S   + 
Sbjct: 289 EKTMKAIKRENDLERLKNNVLRIKENI-HLHLDLIAGLPYEDYDTFKNSFDYVYSLKPEM 347

Query: 202 LSLYQLTIEKGTLFY---KMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + L  L + KGTL +   + +    L  P+  V  + +   + +T
Sbjct: 348 IQLGFLKVLKGTLIFGQVEKYNYKFLNFPTYEVLSNEFISYKELT 392


>gi|303247714|ref|ZP_07333984.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302490986|gb|EFL50883.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 494

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 14/191 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      + Y   +   + + L EM    +    R I   FF     +     
Sbjct: 211 CPFHCTFC-----CKPYSTYRSRSVDNILDEMAVYYE----RGIREFFFFDDLFN----A 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   +             V         +V  +  +  +K+G  +   GV+   ++ L+ 
Sbjct: 258 SAKRVAAISQGILDRGFRVVWAFRGRVDAVTEDMLRLAKKSGCRQALFGVEDATDEGLKR 317

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ-TMTQWEMELQRALSYAVDHLSLYQ 206
           + +     +   AI L R +    S + I   P   T       +  A+S   D      
Sbjct: 318 INKKITVEQVRRAIKLCRKVGILTSTNWIIGFPHHKTQEDILHLIDTAVSIDSDFAQFNI 377

Query: 207 LTIEKGTLFYK 217
           +    GT  ++
Sbjct: 378 MIAYYGTAIFQ 388


>gi|255525257|ref|ZP_05392198.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296187766|ref|ZP_06856160.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255511022|gb|EET87321.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296047723|gb|EFG87163.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 448

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 81/237 (34%), Gaps = 24/237 (10%)

Query: 32  CPY-CDF--NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           CP+ CDF  NS     K      I   + ++  ++       I   F G        P+ 
Sbjct: 169 CPFECDFCYNSCKSVLKTYINRPIDDVIKDINALKT-NHIMFIDDNFIG-------NPKW 220

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
              +L  I     +       + +N   +        + AG   + +G +S+  +S+  +
Sbjct: 221 TKKLLKEIK---PLKLKWNAAVTSNIVDM-PELLDEMKAAGCQSLFIGFESINSKSIDSV 276

Query: 149 GRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
            +   +       +         ++   ++ L +  ++ ++  L+  +   ++ ++ + L
Sbjct: 277 HKVQNSVKRYEKLVEEIHERGIMINASFVFGLDEDDVSVFKNTLEWIVKNKIETVTSHIL 336

Query: 208 TIEKGTLFYK----MHKDGDLVLPSENVAVDLY----NLTQSITSAHGLHAYEISNH 256
           T   GT  Y      ++  D  L + N A  +Y       + +   +     E+   
Sbjct: 337 TPYPGTKLYSSLMEENRIVDFNLSNYNTAHVVYKPKNMTAEELYKGYLWIYKEMYTF 393


>gi|226324639|ref|ZP_03800157.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
 gi|225207087|gb|EEG89441.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
          Length = 441

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 80/236 (33%), Gaps = 23/236 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +  Y  G+    +     ++ +R L        +  G    S  +E 
Sbjct: 155 CNQFCTYC-----IIPYARGRVRSRKK-EDVVEEVRTLAEHGYQEVVLTGIHLSSYGLEW 208

Query: 87  Q-----NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +         +LD I     V     I +    P  V     +             L +Q
Sbjct: 209 KDENGKQTEGLLDLIRAVHGVEGIKRIRLGSLEPRIVTEEFAKELACLPKICPHFHLSLQ 268

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  + +L+ + R ++A+E      L R  F    ++ D+I   P+++  ++E       S
Sbjct: 269 SGCDATLKRMNRRYDAAEYREKCELLRKYFENPALTTDVIVGFPQESEEEFEASRDFVDS 328

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
                  +++ +  +GT   KM    D  +P          + +   +   +  YE
Sbjct: 329 INFYETHIFKYSKRQGTKAAKM----DGQIPEHEKTRRSNIMLE--LNRKKMQRYE 378


>gi|163814091|ref|ZP_02205483.1| hypothetical protein COPEUT_00244 [Coprococcus eutactus ATCC 27759]
 gi|158450540|gb|EDP27535.1| hypothetical protein COPEUT_00244 [Coprococcus eutactus ATCC 27759]
          Length = 483

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   ++    +    +L     +  +  G    S    +
Sbjct: 201 CNNFCTYC-----IVPYVRGRERS-RNPEDIIAECERLADDGVVEIMLLGQNVNSYGKNL 254

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  I     +       + ++P  +                 + L VQS  
Sbjct: 255 EHPITFAELLRRICTIEKIQRVRF--MTSHPKDLSDELIDVIADNPKVCRHLHLPVQSGS 312

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +A +   R   P +S   D+I   P +T   +   +        
Sbjct: 313 TKILNAMNRRYTKESYLALVDRIRTKVPEISLTTDIIVGFPGETEEDFLETMDVVEKVQY 372

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +   GT    M
Sbjct: 373 DTAFTFIYSKRTGTPAAGM 391


>gi|194336812|ref|YP_002018606.1| MiaB-like tRNA modifying enzyme YliG [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|238066432|sp|B4SBD5|RIMO_PELPB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|194309289|gb|ACF43989.1| MiaB-like tRNA modifying enzyme YliG [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 431

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 13/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C       RY   +   ++  L E      L     +  +       S+    
Sbjct: 144 CNRSCSFCSIPKIRGRY---RSQPVEQLLRE----AILLKNSGVKELNIISQDISMFGYD 196

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +    + D + +   ++ +    + A P +  +   +  R+     N + + +Q   ++
Sbjct: 197 TMGKSMLNDLVLRLSDMAFDWIRLLYAYPVNFPLEVIETMRERENICNYLDIPLQHCNDR 256

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R  N  E+I  I   R   P +     +I   P +T  +++  L+   +   D 
Sbjct: 257 ILKSMNRGINKQESIQLIETVREKNPDIRLRTTMIAGYPGETREEFDELLEFVEANRFDR 316

Query: 202 LSLYQLTIEK 211
           L  +    E+
Sbjct: 317 LGCFPYCHEE 326


>gi|298385677|ref|ZP_06995235.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
 gi|298261818|gb|EFI04684.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
          Length = 436

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 79/231 (34%), Gaps = 13/231 (5%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C +KC YC       R+     E  +   +  +              + + G    L + 
Sbjct: 146 CDRKCSYCAIPIITGRHISKPMEEIVDE-VRYLVSQGVKEFQVIAQELTYYGVD--LYKK 202

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q +  +++ I++   V         A P+    + F+  R+       + + +Q + +  
Sbjct: 203 QMLPELIERISEIPGVEWIRLHY--AYPAHFPTDLFRVMRERDNVCKYMDIALQHISDNM 260

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R  +  +    I   R   P +     L+   P +T   +E   +       D +
Sbjct: 261 LKLMRRQVSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKARFDRM 320

Query: 203 SLYQLTIEKGTLFYKMHK---DGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  + E+GT   + ++     ++     +  +D+     +  SA  +  
Sbjct: 321 GAFAYSEEEGTYAAQQYEDSIPQEIKQARLDELMDIQQGISAELSAAKIGQ 371


>gi|225389074|ref|ZP_03758798.1| hypothetical protein CLOSTASPAR_02820 [Clostridium asparagiforme
           DSM 15981]
 gi|225044863|gb|EEG55109.1| hypothetical protein CLOSTASPAR_02820 [Clostridium asparagiforme
           DSM 15981]
          Length = 451

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 25/227 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K+C YC        F S      V +   +       Q +++L      ++++     
Sbjct: 160 CDKRCTYCIIPYLRGSFRSVPMEQLVREAGQLAE-----QGVKELILVAQETTLYGKD-- 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGV 137
             L   + +  +L  +AK   +     I ++   P  +     +  R  +   + + + +
Sbjct: 213 --LYGEKALPKLLHELAKVPGIQW---IRLQYCYPEEITDELIEAIRTEEKVCHYLDIPI 267

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  LR +GR  N ++    I   R   P ++    LI   P +T    E  +    
Sbjct: 268 QHASDGILRRMGRRTNQAQLREMIARLRREIPDIALRTTLISGFPGETQEDHEELMAFVD 327

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               + L ++  + E+ T  Y            E+   ++  L Q I
Sbjct: 328 EMEFERLGVFAYSAEEDTPAYSFPDQV-PQEVKEDRRDEIMQLQQEI 373


>gi|189462612|ref|ZP_03011397.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136]
 gi|189430773|gb|EDU99757.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136]
          Length = 438

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I   + + + +    G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGKIADLVEQARQVAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           +   ++  +     +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDAVEGIERYRISSIE--PNLLTDEIIEYVARSRRFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + IH  + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDTALFASKIHKIKFLMPDAFIGVDVIVGTRGETPEYFEQAYEFIQGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|158522418|ref|YP_001530288.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511244|gb|ABW68211.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 471

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 77/242 (31%), Gaps = 15/242 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC    H       + +     + E+ ++ +  G      +         ++ +
Sbjct: 209 CPYKCAYC----HRIFGDTFRGHSADRIVDEIAFLSKTYGISDFEFLDDIFN----LDRK 260

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +    D I     + + +                +    AG+   S  +++   +    
Sbjct: 261 RLMTFCDLIHSR-NLKTRLVFPNGVRTDIFTAEEIEALADAGMYFASFALETGSPRIQGL 319

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N N  + +  + +A       +   +   P +T  + +M +  A    +  +S + +
Sbjct: 320 VRKNLNIGKFLKNVEIAVRCGVYANGFAMMGFPTETEAEMQMTIDVACGSRLHTISFFTV 379

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           T    T  Y+M +       +     D+     SI  +       +S+ +    +   N 
Sbjct: 380 TPFPNTELYEMARRQCPEKVAAIDYADMEYSGISINLSA------VSDDTLYTYQRKANR 433

Query: 268 NY 269
            +
Sbjct: 434 TF 435


>gi|331697733|ref|YP_004333972.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952422|gb|AEA26119.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Pseudonocardia dioxanivorans CB1190]
          Length = 490

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 73/238 (30%), Gaps = 17/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S   + +  +   + + ++ +     L       ++   G      + +
Sbjct: 156 CNNTCTFCIVPSLRGKERDRRPGDVLAEVSALAADGVLEVTLLGQNVNAYGVEFG--DRE 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
             + +L        +          +P     +      +      ++ + +QS  ++ L
Sbjct: 214 AFSKLLRACGDVEGLERVRF--TSPHPREFSSDVIAAMAETPNVCPQLHMPLQSGSDRVL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R++ +S  +A +   R   P   +S D+I   P +T   +   L            
Sbjct: 272 REMRRSYRSSRFLAILDEVRGSIPDAAISTDIIVGFPGETEEDFRATLDVVERARFAQAF 331

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
            +Q +   GT    +       LP   V  + Y     +            N +  G 
Sbjct: 332 TFQYSPRPGTPAATLPD----QLPKAVVQ-ERYERLVELQERISWEQ----NRALEGR 380


>gi|291548556|emb|CBL21664.1| iron-only hydrogenase maturation protein HydE [Ruminococcus sp.
           SR1/5]
          Length = 347

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +  RY++ +E  +Q      +      G R+   +  GG  P  
Sbjct: 61  YCRNDCYYCGIRRSNRNASRYRLTKEEILQCCENGYEL-----GFRTF--VLQGGEDP-W 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  I + +      +  I  +       ++Q ++ AG +R  L  ++  E+
Sbjct: 113 FNDDRMVDIIRSIKQGYP-----DCAITLSIGEKSKESYQRFKDAGADRYLLRHETASEE 167

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             R+L     + +     ++  + +  ++    +   P QT+     +L          +
Sbjct: 168 HYRYLHPESLSLTNRKQCLYTLKELGYQIGAGFMVGAPGQTLEYLAEDLVFLKDLNPHMV 227

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F +  
Sbjct: 228 GIGPFVPHHDTKFAEEP 244


>gi|86148942|ref|ZP_01067174.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|85840300|gb|EAQ57557.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni CF93-6]
          Length = 433

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAIEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETVDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|237752702|ref|ZP_04583182.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376191|gb|EEO26282.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 438

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 75/235 (31%), Gaps = 22/235 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C KKC YC     V   +  + +     + +       +G + I  +      +G     
Sbjct: 150 CDKKCTYC----IVPHTRGNEISIPSDLILQEARRLAESGTKEILLLGQNVNNYGRRFSG 205

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                N   +L+ I++   +          +P  ++      + +       I + +QS 
Sbjct: 206 AHRAINFTQLLNEISQINGLERIRF--TSPHPLHMDDEFILEFAQNPKICKAIHMPLQSG 263

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + LR + R ++    +  +   R++ P +S   D+I   P ++   +   L       
Sbjct: 264 SSEILRKMKRGYSKEWFLNRVEKMRHLIPELSIGTDIIVGFPTESEDDFLETLDVLEKVR 323

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
            D L  +  +    T  +   +   + L  E        + +           EI
Sbjct: 324 FDTLYSFIYSSRPHTEAHHWLEMEQVHLIDE-------EIAKERLMRLKDRHKEI 371


>gi|154488819|ref|ZP_02029668.1| hypothetical protein BIFADO_02127 [Bifidobacterium adolescentis
           L2-32]
 gi|154082956|gb|EDN82001.1| hypothetical protein BIFADO_02127 [Bifidobacterium adolescentis
           L2-32]
          Length = 484

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 88/265 (33%), Gaps = 23/265 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L+ + + +    ++ +  +V     C   C +C             +      L E++
Sbjct: 159 EELNYFPSQLPTDRASKVSSWVAISVGCNNTCTFC---IVPTTRGKEHDRRPGDILAEIR 215

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L    +   +          +P
Sbjct: 216 QCVDEGAKEVTLLGQNVNSFGYGIG-----DRFAFSKLLRACGEIDGLERVRF--TSPHP 268

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 269 AAFTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILRKIREAMPDAQ 328

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  L+            +  +   GT   +M       +    
Sbjct: 329 ISTDIIVGFPGETEEDFQETLRVVEEARFASAFTFIYSPRPGTPAAEMEQVPHDVVQDRF 388

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEI 253
           E +      +T+           E+
Sbjct: 389 ERLVALQERITEENLKTFEGRDVEV 413


>gi|119026050|ref|YP_909895.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Bifidobacterium adolescentis ATCC 15703]
 gi|229890431|sp|A1A280|MIAB_BIFAA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|118765634|dbj|BAF39813.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 480

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 88/265 (33%), Gaps = 23/265 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L+ + + +    ++ +  +V     C   C +C             +      L E++
Sbjct: 155 EELNYFPSQLPTDRASKVSSWVAISVGCNNTCTFC---IVPTTRGKEHDRRPGDILAEIR 211

Query: 61  WMRQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         ++++S  +G G     +    + +L    +   +          +P
Sbjct: 212 QCVDEGAKEVTLLGQNVNSFGYGIG-----DRFAFSKLLRACGEIDGLERVRF--TSPHP 264

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    ++++   +QS  ++ LR + R++ +++ +  +   R   P   
Sbjct: 265 AAFTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILRKIREAMPDAQ 324

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM--HKDGDLVLPS 228
           +S D+I   P +T   ++  L+            +  +   GT   +M       +    
Sbjct: 325 ISTDIIVGFPGETEEDFQETLRVVEEARFASAFTFIYSPRPGTPAAEMEQVPHDVVQDRF 384

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEI 253
           E +      +T+           E+
Sbjct: 385 ERLVALQERITEENLKTFEGRDVEV 409


>gi|70732737|ref|YP_262500.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pseudomonas
           fluorescens Pf-5]
 gi|123652715|sp|Q4K5I3|MIAB_PSEF5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|68347036|gb|AAY94642.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudomonas fluorescens
           Pf-5]
          Length = 442

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 19/233 (8%)

Query: 20  GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--- 75
             YV     C K   YC F                  + E+  + +  G R ++ +    
Sbjct: 148 SAYVSVMEGCSK---YCTFCVVPYTRGEEVSRPFDDVIAEIIHLAE-NGVREVTLLGQNV 203

Query: 76  --FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--V 130
             + G T        +A + + I     +     I     +P     +  Q + +    V
Sbjct: 204 NGYRGQT----HDGRMADLAELIRVVAAIDGIERIRYTTSHPLEFSDSLIQAHAEVPELV 259

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE 188
             + L VQS  ++ L  + RNH A E  + +   R   P +    D I   P +T   ++
Sbjct: 260 KHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGICISSDFIVGFPGETEKDFQ 319

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
             ++       D    +  +   GT    +  +    +  E +    + L Q 
Sbjct: 320 QTMKLIEDVGFDFSYSFVYSQRPGTPAADLADETPEAVKKERLNALQHRLNQQ 372


>gi|229891226|sp|Q0IC70|MIAB_SYNS3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 473

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 16/220 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +S   +V+  + C ++C YC            Q    +S L EM+ +   
Sbjct: 156 LEDLTTARRDSSTCAWVNVIYGCNERCTYC---VVPSVRGKEQSRLPESILLEMEGLAAR 212

Query: 66  TGPRSISSI-----FFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
            G + I+ +      +G   P +  E +    + D + +   V     +     +P    
Sbjct: 213 -GFKEITLLGQNIDAYGRDLPGITAEGRRQHTLTDLLHQVHDVEGIERLRFATSHPRYFT 271

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
                             +  QS + + L+ + R +        I   R   P   +S D
Sbjct: 272 ERLIDACADLPKVCEHFHIPFQSGDNELLKAMARGYTVERYRRIIDRIRKRMPDAAISAD 331

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +I A P +T  Q+   L        D ++    +    T 
Sbjct: 332 VIVAFPGETDAQYRRTLALIEEIGFDQVNTAAYSPRPNTP 371


>gi|86151526|ref|ZP_01069740.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|315124005|ref|YP_004066009.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|85841155|gb|EAQ58403.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|315017727|gb|ADT65820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
          Length = 433

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|325270230|ref|ZP_08136837.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608]
 gi|324987531|gb|EGC19507.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608]
          Length = 450

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 69/191 (36%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I S +++ +   +  G   + + +  G    +    
Sbjct: 168 CNYFCTYC---TIPYARGFSRNPTIASLVSQAEEAAREGGKEIVLTGVNIGDFGET--TG 222

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
           ++   ++  + +   +      ++E  P  ++ +      +  A +    + +QS  ++ 
Sbjct: 223 ESFLDLVKALDRVEGIRRFRISSLE--PDLIDDDLIAYCARSRAFMPHFHIPLQSGSDEV 280

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++ +     I   + + P   +  D++     +    +E   +   S  V  L
Sbjct: 281 LKLMHRRYDTALFAHKIRFIKEMMPDAFIGVDVMVGSRGERPEYFEDCYRFLDSLPVTQL 340

Query: 203 SLYQLTIEKGT 213
            ++  +   GT
Sbjct: 341 HVFPYSERPGT 351


>gi|296270562|ref|YP_003653194.1| radical SAM domain-containing protein [Thermobispora bispora DSM
           43833]
 gi|296093349|gb|ADG89301.1| Radical SAM domain protein [Thermobispora bispora DSM 43833]
          Length = 486

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 73/241 (30%), Gaps = 36/241 (14%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF---FGGGTP 81
           C   C +C    F       K      + + L E+  +      R +  +    FG    
Sbjct: 170 CPHVCDFCYKEAFFK---GGKSFYTQAVDAALAEIDRL----PGRHLYFLDDHLFG---- 218

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKA--GVNRISLGVQ 138
               P+  A + DG+     +            P  +E     G R    G   +S    
Sbjct: 219 ---NPRFAAALFDGMRGMGRLWQAAGTVQSVLRPGLLEKAVEAGLRSLFVGFETLSSANL 275

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + + +    +GR     +  AAI         ++   ++ + +   + ++  ++ A+   
Sbjct: 276 TEQRKWQN-IGR-----DYEAAIRRLHEHGVMVNGSFVFGMDEDDTSVFDRTVEWAIEQG 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHK------DGDLVLPSENVAVDLY-NLTQSITSAHGLHAY 251
           ++  + + LT   GT  Y            D  L     AV     +T          AY
Sbjct: 330 IETATFHILTPYPGTRLYDRMARAGRILHHDWDLYDTRHAVFRPARMTPEELEEGYWRAY 389

Query: 252 E 252
            
Sbjct: 390 R 390


>gi|195456808|ref|XP_002075296.1| GK17257 [Drosophila willistoni]
 gi|194171381|gb|EDW86282.1| GK17257 [Drosophila willistoni]
          Length = 570

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 87/258 (33%), Gaps = 28/258 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++                S  +  +G    S + 
Sbjct: 225 CLNQCTYCK-TKHARGDLASYPPEEIVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSL- 282

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I ++  +   +      NP  + + + +   K        + + + VQS 
Sbjct: 283 PELLWQLVEVIPEHCMLRVGM-----TNPPYI-LEHLEEVAKVLQHPRVYSFLHVPVQSG 336

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +   +    +    AR     ++ D+I   P +T   +E  +     Y 
Sbjct: 337 SDSVLGEMKREYCRKDFEHVVDFLRARVPGLTIATDIICGFPTETEADFEETMTLCEKYR 396

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-----EI 253
              L + Q     GT   KM +    ++      +     T    +      Y     EI
Sbjct: 397 FPSLFINQFFPRPGTPAAKMERIPANLVKKRTKRLTDLFYTYEPYAGRVGEVYAVLVTEI 456

Query: 254 SNH--SFLGAESLHNLNY 269
           S+    ++G    HN +Y
Sbjct: 457 SHDKLHYVG----HNKSY 470


>gi|194740916|ref|XP_001952936.1| GF17521 [Drosophila ananassae]
 gi|190625995|gb|EDV41519.1| GF17521 [Drosophila ananassae]
          Length = 577

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 75/228 (32%), Gaps = 28/228 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGG-- 79
           C   C YC            +   ++S LTE++ +++          ++++S   GG   
Sbjct: 253 CDNMCTYC---IVPFTRGRERSRPLESILTEVRALQEQGVKEVTLLGQNVNSYRDGGTSQ 309

Query: 80  --TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-----------NPSSVEVNNFQGYR 126
              P+ +       +    +   T S  +    EA           +P     +  +  R
Sbjct: 310 EKDPNSVPVPGFKTVYKPKSGGITFSRLLRSVAEAVPEMRIRFTSPHPKDFSDDVLRVIR 369

Query: 127 KAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQ 182
                  ++ L  QS   + L  + R ++    +  +   R   P +    D I     +
Sbjct: 370 DYPNVCKQLHLPAQSGNTKVLERMRRGYSREAYLHLVDRIRLFLPNVGLSSDFICGFCGE 429

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           T  +++  +        +   L+  ++ + T  ++  KD   +L    
Sbjct: 430 TEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRFKDDVPLLVKNE 477


>gi|328953239|ref|YP_004370573.1| Ribosomal protein S12 methylthiotransferase rimO [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453563|gb|AEB09392.1| Ribosomal protein S12 methylthiotransferase rimO [Desulfobacca
           acetoxidans DSM 11109]
          Length = 473

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +  +     +   + + + E + +        +  +       +     
Sbjct: 165 CSHHCTYC---TIPQIRGPYRSRPLSTLVAEAKQLAAQG----VRELNLVAQDTTAYGVD 217

Query: 88  NIALILDGIAKNWTV---SSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +L            +      +  +P+ V     +             L VQ + +
Sbjct: 218 QGGRLLLPELLRQLAGIAALQWIRLLYGHPARVTPELLRVMADHPQICPYFDLPVQHVSD 277

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  +GR +   +    +   R I P  +    +I   P +    +    Q       D
Sbjct: 278 RLLHRMGRGYRQKDLWETLARIRTIIPAATLRTSVIVGFPGEREQDFAELCQVTAQMEFD 337

Query: 201 HLSLYQLTIEKGTLFYKM 218
           HL ++    E+GT   KM
Sbjct: 338 HLGVFAYQPEEGTPAAKM 355


>gi|315635668|ref|ZP_07890931.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Arcobacter butzleri JV22]
 gi|315479965|gb|EFU70635.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Arcobacter butzleri JV22]
          Length = 436

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 74/233 (31%), Gaps = 19/233 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C KKC YC     +     G+E  I      ++ +R+     ++  +  G    S     
Sbjct: 152 CDKKCTYC-----IVPSTRGEEISIPP-EMIVEQVRKSVEQGAVEVMLLGQNVNSYGRRF 205

Query: 85  EPQ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +        +L  ++K   +          +P  ++    + + K       I + +Q
Sbjct: 206 SDKREKYTFTKLLQDVSKIDGLERIRF--TSPHPLHMDDEFIEEFAKNPKISKCIHMPLQ 263

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +      R + P   ++ D+I A P +T   +   L     
Sbjct: 264 SGSTSVLKAMKRGYSKEWFLNRASKMRELVPNLRITTDIIVAFPGETQEDFLDTLDVVEQ 323

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              D +  ++ +   GT    +              +DL  L +         
Sbjct: 324 VKFDQIFNFKYSPRPGTEALNLKDKELPDEIGSQRLIDLIELHKRYLEESMPK 376


>gi|309388923|gb|ADO76803.1| RNA modification enzyme, MiaB family [Halanaerobium praevalens DSM
           2228]
          Length = 438

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 70/196 (35%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C + C YC            +    +S   E++ + +      + +    G         
Sbjct: 156 CNQFCSYC---IIPYARGPVRSRKKESITEEVKRLSKQGVKEIVLTGTHLGAYGSDKGNK 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
           + +A +++ + +  ++      +IE     ++        ++ +    + L +QS   Q 
Sbjct: 213 KALAQLMESLTEIKSLKRVRLSSIEGT--EIDQGIINLISESDIFCPHLHLPLQSGSNQI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E    +   R   P ++   D+I   P +T   +   L+     +   +
Sbjct: 271 LKAMNRPYTVEEFKKTVAKLRKKIPDLAITTDVIVGFPGETEKTFAETLKVVKEISFAKV 330

Query: 203 SLYQLTIEKGTLFYKM 218
            ++  +  +GT   KM
Sbjct: 331 HVFPYSAREGTPAAKM 346


>gi|239917253|ref|YP_002956811.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Micrococcus luteus NCTC
           2665]
 gi|281414269|ref|ZP_06246011.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Micrococcus luteus NCTC
           2665]
 gi|239838460|gb|ACS30257.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Micrococcus luteus NCTC
           2665]
          Length = 515

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 84/230 (36%), Gaps = 17/230 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 151 LESLEVFPSTLPTKRDSTHSGWVSISVGCNNTCTFC----IVPSLRGKEKD--RRPGEIL 204

Query: 60  QWMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L G  ++     G    +      +    A +L    +   +          +P+
Sbjct: 205 AEVQALVGAGAVEVTLLGQNVNTYGVEFGDRGAFAKLLRACGEIEGLERVRF--TSPHPA 262

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    + ++ + +QS  ++ L+ + R++ +++ +  +   R   P   +
Sbjct: 263 AFTDDVIDAMAETPNVMPQLHMPLQSGSDKVLKDMRRSYRSAKFLRILEKVRERIPHAAI 322

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + D+I   P +T   +   ++   +        +Q +I  GT   +M   
Sbjct: 323 TTDIIVGFPGETEEDFAETMRVVEASRFSSAFTFQYSIRPGTPAGEMEHQ 372


>gi|157736509|ref|YP_001489192.1| tRNA-methylthiotransferase [Arcobacter butzleri RM4018]
 gi|229890442|sp|A8ERE9|MIAB_ARCB4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157698363|gb|ABV66523.1| tRNA-methylthiotransferase [Arcobacter butzleri RM4018]
          Length = 436

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 74/233 (31%), Gaps = 19/233 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C KKC YC     +     G+E  I      ++ +R+     ++  +  G    S     
Sbjct: 152 CDKKCTYC-----IVPSTRGEEISIPP-EMIVEQVRKSVEQGAVEVMLLGQNVNSYGRKF 205

Query: 85  EPQ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +        +L  ++K   +          +P  ++    + + K       I + +Q
Sbjct: 206 SDKREKYTFTKLLQDVSKIDGLERIRF--TSPHPLHMDDEFIEEFAKNPKISKCIHMPLQ 263

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +      R + P   ++ D+I A P +T   +   L     
Sbjct: 264 SGSTSVLKAMKRGYSKEWFLNRASKMRELVPNLRITTDIIVAFPGETQEDFLDTLDVVEQ 323

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
              D +  ++ +   GT    +              +DL  L +         
Sbjct: 324 VKFDQIFNFKYSPRPGTEALNLKDKELPDEIGSQRLIDLIELHKRYLEESMPK 376


>gi|88597143|ref|ZP_01100379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|121613595|ref|YP_001000165.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|167005123|ref|ZP_02270881.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|218562113|ref|YP_002343892.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|123141627|sp|Q0PB55|MIAB_CAMJE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890471|sp|A1VYH4|MIAB_CAMJJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|87250048|gb|EAQ73006.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|88190832|gb|EAQ94805.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112359819|emb|CAL34606.1| putative tRNA 2-methylthioadenosine synthase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|284925725|gb|ADC28077.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni IA3902]
 gi|315928214|gb|EFV07531.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni DFVF1099]
 gi|315930005|gb|EFV09148.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 433

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAIEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETVDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|310821403|ref|YP_003953761.1| radical sam domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394475|gb|ADO71934.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 664

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 75/224 (33%), Gaps = 19/224 (8%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
              C +C  N         +       ++E+  +    G R  + +       ++++   
Sbjct: 294 KHHCTFCGLN---GGNMDFRSKSADRVISELSELSTKYGIRKFNIVD------NIMDLAY 344

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I  +             +    + N   ++    +    AG+ R+  GV+S+ ++ LR +
Sbjct: 345 IQDL--APRITSDTPYTLFFETKVN---LKRAQLERIAAAGIRRLQPGVESMHDEILRLV 399

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLY 205
            +   A + I  +  AR I   ++++ ++ +P +      +    L          +   
Sbjct: 400 DKGTTALQNIQLLKWAREIGIFITWNFLWDVPGEQDAWYGEMAAWLPWVTHLQPPGVDRI 459

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           Q    + + +++      L L    +   +Y LT         +
Sbjct: 460 QF--HRFSPYHQRPASFGLTLEPYPLYSHVYPLTPEELGGLAYY 501


>gi|307128628|ref|YP_003880658.1| putative MiaB-like protein [Candidatus Sulcia muelleri CARI]
 gi|306483090|gb|ADM89960.1| putative MiaB-like protein [Candidatus Sulcia muelleri CARI]
          Length = 431

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 13/194 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C  KC YC   +  +   + + + I++ +   + + +  G + I       G    I   
Sbjct: 150 CDYKCSYC---TIPKARGLSRSDNIKNIIKYAKNIIKQ-GIKEIVLTGVNIGDFGKIYNK 205

Query: 85  -EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
               N   ++  +         + I+    P+ +  +        K  VN   + +QS  
Sbjct: 206 KNESNFLELIQAMEYYLNDIKRIRIS-SIEPNLLSDDIINFISKSKIFVNHFHIPLQSGS 264

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R ++    +  I    NI P   +  D+I   P +    +           +
Sbjct: 265 DEILNKMKRRYSKKIYLERIKKIFNIMPYACIGTDVIVGFPGEKEENFLETYSLLSELEI 324

Query: 200 DHLSLYQLTIEKGT 213
            +L ++  +  K T
Sbjct: 325 SYLHVFPFSERKNT 338


>gi|301312074|ref|ZP_07217996.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 20_3]
 gi|300830176|gb|EFK60824.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 20_3]
          Length = 457

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 26/209 (12%)

Query: 23  VHWPF-------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPR 69
           VH          C   C YC            +   I+S L E++ M +          +
Sbjct: 160 VHISGFVSIMRGCNNFCTYC---IVPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQ 216

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +++S  F     ++       ++LD +AK          T  ++P  +  +  +      
Sbjct: 217 NVNSYSFEKEGETI----TFPILLDCVAKEVPDMRIRFTT--SHPKDMSDDTLRVIAAND 270

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L  QS   + L+ + R +     +  I   R I P   +S DL      +T  
Sbjct: 271 NICKFIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRIVPDCAISTDLFCGFHSETEE 330

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            ++  L        D   L++ +   GT 
Sbjct: 331 DYQETLSLMREVGYDSAFLFKYSERPGTY 359


>gi|115379705|ref|ZP_01466783.1| radical SAM [Stigmatella aurantiaca DW4/3-1]
 gi|115363295|gb|EAU62452.1| radical SAM [Stigmatella aurantiaca DW4/3-1]
          Length = 666

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 75/224 (33%), Gaps = 19/224 (8%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
              C +C  N         +       ++E+  +    G R  + +       ++++   
Sbjct: 296 KHHCTFCGLN---GGNMDFRSKSADRVISELSELSTKYGIRKFNIVD------NIMDLAY 346

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I  +             +    + N   ++    +    AG+ R+  GV+S+ ++ LR +
Sbjct: 347 IQDL--APRITSDTPYTLFFETKVN---LKRAQLERIAAAGIRRLQPGVESMHDEILRLV 401

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLY 205
            +   A + I  +  AR I   ++++ ++ +P +      +    L          +   
Sbjct: 402 DKGTTALQNIQLLKWAREIGIFITWNFLWDVPGEQDAWYGEMAAWLPWVTHLQPPGVDRI 461

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           Q    + + +++      L L    +   +Y LT         +
Sbjct: 462 QF--HRFSPYHQRPASFGLTLEPYPLYSHVYPLTPEELGGLAYY 503


>gi|83589922|ref|YP_429931.1| hypothetical protein Moth_1074 [Moorella thermoacetica ATCC 39073]
 gi|123752930|sp|Q2RJK1|RIMO_MOOTA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|83572836|gb|ABC19388.1| SSU ribosomal protein S12P methylthiotransferase [Moorella
           thermoacetica ATCC 39073]
          Length = 432

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRY-----KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC   S    Y     +      +      ++ +  +    +   +   G    
Sbjct: 151 CNNRCTYCTIPSIKGPYRSRPLEKVVAEAVSLAARGIKELVLVAQDTTAYGLDCYG---- 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  +A+   +       + A P+ +     +        V  + L +Q  
Sbjct: 207 ---EYRLPELLRRLARIEGIEWVR--LLYAYPTRITPELIEVMATEPGVVPYLDLPLQHA 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            E  LR +GR    +  + AI   R   P ++     I   P +    +++ L       
Sbjct: 262 SEGVLRRMGRPGTGAAGLRAIESLRRAIPEITIRSTFIVGFPGEEEEDFQILLDFLTDAR 321

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           +D +  ++ + E+GT+   + 
Sbjct: 322 LDWVGAFKFSPEEGTIAASLP 342


>gi|282162697|ref|YP_003355082.1| hypothetical protein MCP_0027 [Methanocella paludicola SANAE]
 gi|282155011|dbj|BAI60099.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 440

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC  N         +   +   + E++ ++   G R ++        PS    +
Sbjct: 196 CPYRCAYC--NVTTAFGGELRPRNVGDVVEEIKALKAQ-GIRIVTLTDACFNVPSGYAKE 252

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+D   + +  ++ V +         +    + +++AG    SLG ++   + L+ 
Sbjct: 253 VLNAIIDSGVRVYLNTTFVPVA-----GHFDDELMELFKRAGGIYASLGAETFSRKMLKS 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     + +A   L            ++  P +  +     L   L +       Y +
Sbjct: 308 YHKPFTLDDVLACAGLLGRHHIPFMVQALFGGPGEDASTLRESLD-MLRHVPYAEFTYTM 366

Query: 208 TIE--KGTLFY 216
            I    GTL +
Sbjct: 367 GIRLLPGTLLF 377


>gi|163743347|ref|ZP_02150727.1| MiaB-like tRNA modifying enzyme [Phaeobacter gallaeciensis 2.10]
 gi|161383341|gb|EDQ07730.1| MiaB-like tRNA modifying enzyme [Phaeobacter gallaeciensis 2.10]
          Length = 421

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 21/205 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 204

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  +     +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 205 ATPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDDNLMQAIATEPRLMPHLHLSLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+    
Sbjct: 260 HGDDLILKRMARRHLRDDAIRFCEEARKLRPEMTFGADIIAGFPTETDAHFENSLKLVSD 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKD 221
             +  L ++  +  +GT   ++   
Sbjct: 320 CDLTWLHVFPYSKREGTPAARIPSQ 344


>gi|289165670|ref|YP_003455808.1| isopentenyl-adenosine A37 tRNA methylthiolase [Legionella
           longbeachae NSW150]
 gi|288858843|emb|CBJ12757.1| isopentenyl-adenosine A37 tRNA methylthiolase [Legionella
           longbeachae NSW150]
          Length = 447

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 69/215 (32%), Gaps = 8/215 (3%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C  YC F      R       F        Q   Q     ++          + +E  +I
Sbjct: 157 CSKYCSFCVVPYTRGTEISRPFDDVLAECYQLATQGVREINLLGQNVNDYRGT-MENGDI 215

Query: 90  ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
           A +   I     +     I     +P +   N    Y +     N + L VQS  ++ L 
Sbjct: 216 ADLALLIHYLAAIEGIDRIRFTTSHPLAFSDNLINAYAEVPELANHLHLPVQSGSDRILG 275

Query: 147 FLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R + A E  + I   R I P +  S D+I   P +T   ++  +        D    
Sbjct: 276 LMKRGYTALEFKSKIRKLRKIRPDIRLSTDIIVGFPGETDKDFQDTMDLVHEIGFDTSFS 335

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +  +   GT    +  D  L +  + + +    L 
Sbjct: 336 FIYSPRPGTPAANLPDDTPLEVKKQRLQILQNRLL 370


>gi|270159532|ref|ZP_06188188.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Legionella longbeachae
           D-4968]
 gi|269987871|gb|EEZ94126.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Legionella longbeachae
           D-4968]
          Length = 434

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 69/215 (32%), Gaps = 8/215 (3%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C  YC F      R       F        Q   Q     ++          + +E  +I
Sbjct: 144 CSKYCSFCVVPYTRGTEISRPFDDVLAECYQLATQGVREINLLGQNVNDYRGT-MENGDI 202

Query: 90  ALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
           A +   I     +     I     +P +   N    Y +     N + L VQS  ++ L 
Sbjct: 203 ADLALLIHYLAAIEGIDRIRFTTSHPLAFSDNLINAYAEVPELANHLHLPVQSGSDRILG 262

Query: 147 FLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R + A E  + I   R I P +  S D+I   P +T   ++  +        D    
Sbjct: 263 LMKRGYTALEFKSKIRKLRKIRPDIRLSTDIIVGFPGETDKDFQDTMDLVHEIGFDTSFS 322

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +  +   GT    +  D  L +  + + +    L 
Sbjct: 323 FIYSPRPGTPAANLPDDTPLEVKKQRLQILQNRLL 357


>gi|78044301|ref|YP_360190.1| putative oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996416|gb|ABB15315.1| putative oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 292

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 14/196 (7%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + KV Q   ++     + + + L  P +       G   S    
Sbjct: 26  CSHNKCTFCG----MYKDKVFQIRPLKEVKEIINFFK-LNYPFAEKVFLADGDALSA-PT 79

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  +L  +  ++       I+  A P S+           R+ G++ + LG++S  + 
Sbjct: 80  EYLIEVLKMLKNSFPRLKK--ISSYAGPKSLLTKSAEELHLLREHGISLLYLGLESGSDT 137

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            L+ + +  +A E I     A+     +S  +I  L  + +         +     +   
Sbjct: 138 VLKKVQKGFSAEEIINGCQKAKEANFELSITVISGLGGKELWQEHALSSAEVVSKISPHF 197

Query: 202 LSLYQLTIEKGTLFYK 217
           L+   L +  GT  YK
Sbjct: 198 LATLTLMLVPGTKLYK 213


>gi|86153933|ref|ZP_01072136.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|157414751|ref|YP_001482007.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|229890469|sp|A8FKP3|MIAB_CAMJ8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|85842894|gb|EAQ60106.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|157385715|gb|ABV52030.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307747390|gb|ADN90660.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Campylobacter jejuni subsp. jejuni M1]
 gi|315931101|gb|EFV10075.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 433

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|283851999|ref|ZP_06369274.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
 gi|283572549|gb|EFC20534.1| Radical SAM domain protein [Desulfovibrio sp. FW1012B]
          Length = 532

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 65/198 (32%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC+  +    ++ G   + +     +  +       +    F  G    L +  
Sbjct: 226 CPHHCAYCNVPTVKALFRPGPTPYFRH--RSVGHVLAELRDVTRRYPFIQGVQ--LFDDT 281

Query: 88  NIAL---ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +     ++  A  +     + +  +A+P+++E        +AG+  + +G+Q+   + 
Sbjct: 282 FFSRSLAWIEAFAAAYKADIGLPLFCQASPATLEAQKLDALIEAGLCYVEMGIQTGSPKM 341

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM---SFDLIYALPKQTMTQWEMELQRALSY-AVD 200
                R  +  + ++   L      R+    + +I   P +        ++         
Sbjct: 342 RALYRRPESDGQVLSGATLLHARQGRLLPPDYHVIIDAPWEDEEDLLATVRLLARLPKPF 401

Query: 201 HLSLYQLTIEKGTLFYKM 218
            L++  L     T  Y  
Sbjct: 402 GLAIASLLFFPDTALYAK 419


>gi|237742065|ref|ZP_04572546.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|229429713|gb|EEO39925.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
          Length = 304

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 80/239 (33%), Gaps = 13/239 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++  Q    +++ + +          +F   T +  +   +  
Sbjct: 43  CIFCSENGSGDFTSGKLKSIHQQIDEQIELVSKKYKGDK-YIAYFQNFTNTYADVNYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I +    +  +   + + I   P  +  +  +   +        I LG+Q++ ++  ++ 
Sbjct: 102 IYEEALLHKKI---IGLAIATRPDCLGNDVLELLNELNKKTFLWIELGLQTINDEVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +       A     ++  +    +I  LPK+    +      + +     L L+ + 
Sbjct: 159 NRAYETKIYEEATKKLNSLNIKFVTHIILGLPKEKNDDYLKTAIFSQNCGTWGLKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           + K T   K+++ G+L + S+           +I         EI  H   G      L
Sbjct: 219 VVKNTPLEKLYQSGNLKVHSKEE---YIEKIVNILENISP---EIVIHRMTGDGDRETL 271


>gi|222152590|ref|YP_002561765.1| radical SAM superfamily protein [Streptococcus uberis 0140J]
 gi|222113401|emb|CAR41060.1| radical SAM superfamily protein [Streptococcus uberis 0140J]
          Length = 306

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 11/224 (4%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     S   ++F   T +    + I  
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVSQYLVYFQNFTNTHAPVEVIKE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
             +       V   V I I   P  +         +        + LG+Q+  E + + +
Sbjct: 103 RYEQAINEPGV---VGINIGTRPDCLPDETIAYLAELSQRMHVTVELGLQTTYETTSKLI 159

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+       +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 160 NRAHSYDLYKETVKRLRKYPKIEIVSHLINGLPGETAEMMIENVRRCVTDNDIQGIKLHL 219

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L +   T   +   +G L L S+   V +      I   + +  
Sbjct: 220 LHLMTNTRMQRDFHEGRLQLLSQEEYVSIICDQLEIIPQNIIIH 263


>gi|205355334|ref|ZP_03222105.1| hypothetical protein Cj8421_0457 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346568|gb|EDZ33200.1| hypothetical protein Cj8421_0457 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 419

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 130 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 181

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 182 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEDLERIRFTSPHPLHMDDKFLEVFANNP 237

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 238 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 297

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 298 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 335


>gi|168180715|ref|ZP_02615379.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
 gi|226949759|ref|YP_002804850.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
 gi|182668451|gb|EDT80430.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
 gi|226843731|gb|ACO86397.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
          Length = 445

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +Y+  ++   ++ L E++ + +      +  I       ++    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRKK---ENILKEVENLAKQG----VKEIILIAQDTTMYGID 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 209 IYGKKVLHELLRDISKVEGVKWIR--LLYCYPEEITKELIEEIKNNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIINIIKKLRKEIEGITLRTSLIVGFPGETEGEFSELKEFVSDVK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT      +   +       E + +   ++++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMKEQIDEEIKEKREEEIMILQQSISKDINKEKIGKIYEV 384


>gi|148925837|ref|ZP_01809524.1| hypothetical protein Cj8486_0449c [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145844823|gb|EDK21927.1| hypothetical protein Cj8486_0449c [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 433

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEDLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|20094818|ref|NP_614665.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
 gi|19888033|gb|AAM02595.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 514

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 105/335 (31%), Gaps = 63/335 (18%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS-LI 84
           C  +C +C   F          +   ++  L  ++ + +    R+         +PS  +
Sbjct: 222 CPYRCAFCLGGF-----TAGHMRHRPVEQLLEVLEDVEKSPYDRAAM------ISPSPTL 270

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            P+    IL+       +  ++E+++     + ++       R+AGV  ++L  +S  E 
Sbjct: 271 HPE-FEEILEEC-----LERHLEVSLPSTRINDLDPELLPELREAGVRTLTLAPESGSED 324

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW----EMELQRALSYAV 199
            L FL +  +    +  +  A  +  R+    I  +P     +         +     A 
Sbjct: 325 VLEFLNKPLHRDHLLELVEDAGRLGMRVKLYFIVGIPGFPPEEDTVASARLARECAELAD 384

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
             +S+  L  +  T              SE ++    N    +            +    
Sbjct: 385 VRVSVNPLIPKACTPLQ----------YSEMLSAREINRRYRLFEREFRGRVSFEDPELA 434

Query: 260 GAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRV---AISIEKHPESWLKMVRKNGHAVV 316
            A+ L                   SR  V   R+    +   + P +W + +R +G ++ 
Sbjct: 435 RAQCLL------------------SRGDVDVSRILEEVLWNARSPGAWARAMRSHGVSIS 476

Query: 317 EKEFLS-SEQQADEFLMMGLRLREGISVKDWEMLA 350
                   E    +F+      R G   ++   L 
Sbjct: 477 PDRPPDGPEDVPYDFV------RAGPDHEELYRLF 505


>gi|289192861|ref|YP_003458802.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288939311|gb|ADC70066.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 356

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 72/249 (28%), Gaps = 22/249 (8%)

Query: 23  VHW-------PFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSI 74
           +H        P    KC YC F +   +    +        +       + +G R +S  
Sbjct: 67  IHITNVCHINP----KCLYCGFAAGTSKEGYYKPFRLTDEEIKRSAIAIEESGIRRVSCS 122

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
              G      + + +   L  + K   +   V          +   + +  +K G++ I 
Sbjct: 123 SAHGY-----QGREVVRALKIVKKYTNLEVLVNAGA-----DLTEESIKELKKYGIDTIC 172

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
             ++++ E+  + +       + I    L       +S  L+  + +    + E      
Sbjct: 173 CNLETINEELFKKVKPGEELEDRIRVCKLVNKYGIELSTGLLIGIGESYEDRVEHLFYLK 232

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V  + +      KGT      K   L          L      ITS       E+ 
Sbjct: 233 NELIVGEVPIMGFNPYKGTPMENHPKCSALEQAKTIAITRLIFPNIRITSPTPTIGAELV 292

Query: 255 NHSFLGAES 263
             +  G  S
Sbjct: 293 QFALFGGAS 301


>gi|269118813|ref|YP_003306990.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386]
 gi|268612691|gb|ACZ07059.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386]
          Length = 430

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 69/193 (35%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C K C YC          + +    +S L E++++ +      + +   +   G      
Sbjct: 152 CTKFCSYC---KIPYARGMSRSRQPESVLEEIKFLGEAGYKEIVVTGINLSEYGSDFG-- 206

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E  N   IL+ I K   +           P ++        ++    +  + + +QSL++
Sbjct: 207 ENINFDYILEKILKIEEIDRVR--VSSVYPDTLSEKFISLLKENKKLMPHLHVSIQSLDD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + RN+ A   +  +   +   P   ++ D+I   P++    +    +        
Sbjct: 265 KILKLMKRNYRAEFVVELLKKVQEEVPDSAITADIITGFPQEEEENFWNTFENMKKINFS 324

Query: 201 HLSLYQLTIEKGT 213
              ++  +  + T
Sbjct: 325 DFHIFPYSDREKT 337


>gi|189467137|ref|ZP_03015922.1| hypothetical protein BACINT_03521 [Bacteroides intestinalis DSM
           17393]
 gi|189435401|gb|EDV04386.1| hypothetical protein BACINT_03521 [Bacteroides intestinalis DSM
           17393]
          Length = 343

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +  +    ++  R+        +    GG  S ++  
Sbjct: 62  CRNNCYYCG----IRKGNQSVLRYELTREDILECCRE-GYTLGFRTFVLQGGETSSVKDD 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +  I + +      +  I  +        ++ + +AG NR  L  ++  E+    
Sbjct: 117 FILETVTAIHREFP-----DCAITLSLGEKSHETYEHFFRAGANRYLLRHETHNEEHYHH 171

Query: 148 LG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +  + +  +   + I  +    ++   P Q       +L     +  + + +  
Sbjct: 172 LHPDKMSIRQRLQCLAWLKEIGYQTGTGIMVGSPGQNTDHLVEDLLFIERFHPEMIGIGP 231

Query: 207 LTIEKGTLFYKMHK 220
                 T F     
Sbjct: 232 FIPHHDTPFAACPP 245


>gi|150401450|ref|YP_001325216.1| biotin synthase [Methanococcus aeolicus Nankai-3]
 gi|150014153|gb|ABR56604.1| Radical SAM domain protein [Methanococcus aeolicus Nankai-3]
          Length = 344

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 71/241 (29%), Gaps = 26/241 (10%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTE--------MQWMRQLTGPRSISSIFFGGGTPS 82
           KC YC F +   +     E + + F T         +   +      S SS    GG  +
Sbjct: 79  KCYYCGFAAGTSK-----EGYYEPFRTTDEEIKNSAIAIEKSGIMRVSCSSAHGYGGKET 133

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           L         L  + +N  +   V             N  +  +K  ++ I   ++++  
Sbjct: 134 L-------RTLKIVKENTNLEVLVNAGA-----DFTENCIKELKKHDIDIICCNLETINN 181

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +  + +    +    I    L +     +S  L+  +  ++       L       VD +
Sbjct: 182 KVFKSVKPGEDLENRINICKLVKKYDINLSSGLLLGI-GESYEDRANHLLFLKELPVDEI 240

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +      K T      K   L          L      ITS       E+   + +G  
Sbjct: 241 PIMGFNPYKDTPMENHPKCSALEQAKTIAISRLMFPDIRITSPTPTIGAELVQFALMGGA 300

Query: 263 S 263
           S
Sbjct: 301 S 301


>gi|158320272|ref|YP_001512779.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs]
 gi|158140471|gb|ABW18783.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs]
          Length = 433

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 90/267 (33%), Gaps = 35/267 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +  L  ++ +  L        +  G    S  + +
Sbjct: 152 CNQYCTYC----IIPYARGPIRS--RGPLEIVEEVETLVQKGFKEVVLTGIHVASYGKDR 205

Query: 88  ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               ++  IL  +     +      ++E  P+    +  +   +     +   L +QS  
Sbjct: 206 SDGTDLIHILKQVNGAQGLERIRLSSLE--PTLFTDDFLRELSQLDKICDHFHLSLQSGC 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
             +L+ + R + A E        R ++P ++   D+I   P +T  ++    +       
Sbjct: 264 NATLKRMNRKYTAEEYKEIAGRIRKVYPEVALTTDVIVGFPGETEEEFNTTYEFIKDIGF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
             + +++ +   GT     +K+    L     +  L +L + +      + Y      F+
Sbjct: 324 SEIHVFKYSPRTGTP-ASKYKEQVDGLTKHYRSEKLIDLGEKM-----KNQYRGQ---FV 374

Query: 260 GAE--------SLHNLNYWRY--GDYI 276
           G E        S  N  Y      +Y+
Sbjct: 375 GKERKVLFEAISKENKAYMEGYTDNYL 401


>gi|326384493|ref|ZP_08206173.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196838|gb|EGD54032.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 521

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 47/144 (32%), Gaps = 9/144 (6%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +      +      ++ + +QS  ++ LR + R++  ++ +  +   R  
Sbjct: 256 TSPHPAEFTDDVIAAMAETPNICPQLHMPLQSGSDRVLRAMRRSYRRTKFLGILDRVREA 315

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P   ++ D+I   P +T   +   L             +Q +   GT    M       
Sbjct: 316 MPHAAITTDIIVGFPGETEEDFAETLDVVEKARFSSAFTFQYSPRPGTPAATMPDQ---- 371

Query: 226 LPSENVAVDLYNLTQSITSAHGLH 249
                V  + Y    ++     L 
Sbjct: 372 -VPPEVVTERYQRLIALQERICLE 394


>gi|307243410|ref|ZP_07525567.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306493220|gb|EFM65216.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 299

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 10/222 (4%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    +       +   ++   +++    Q    RS   +F   G P +++ 
Sbjct: 25  CTHNKCKFCGMYRYTN----FKMESLEQIESDVIEASQHPFYRSTKRVFLLNGNPFVLKA 80

Query: 87  QNIALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  I + I K    V          +  +   +  +  ++AG+N + +GV+S  +++L
Sbjct: 81  ERLLKIAEIIHKYLKNVEVITTYASIKDIENKTDDELRQLKEAGINDLYIGVESGNQEAL 140

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY----AVDH 201
            F+ + +   EAI  +             ++  L  + + +     ++            
Sbjct: 141 EFINKGNTVDEAIREMKRLDKFNYNYYAMILTGLMGRGIDKAIENGRKTGKMLSQVNARG 200

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           +    +T+  GT  + ++K G     SE   +          
Sbjct: 201 VFPMSVTLVPGTELWDLYKSGQYQEASEYDRLVELREIIDNL 242


>gi|254432004|ref|ZP_05045707.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC
           7001]
 gi|197626457|gb|EDY39016.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC
           7001]
          Length = 467

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 70/220 (31%), Gaps = 16/220 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C  +C +C      R     +   I+S + E + +        +  S I    G    ++
Sbjct: 161 CDYRCAFC---IIPRLRGDQRSRPIESIVAEARQLAAQGVKELVLISQITTNYG----LD 213

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + + +     V         A P+ +       YR+    V  + L +Q     
Sbjct: 214 LYGKPRLAELLRALAEVEIPWIRVHYAYPTGLTPEVLAAYREVPNVVPYLDLPLQHSHPD 273

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R   A+     +H  R   P        I   P +T   ++  L        DH
Sbjct: 274 VLRAMNRPWQANVTGGLLHRIREQLPDAVLRTTFIVGFPGETEEHFQHLLDFVAEQRFDH 333

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           + ++  + E GT   ++    D V P    A     +T  
Sbjct: 334 VGVFTFSPEDGTPAAELP---DAVAPELAAARKDRLMTVQ 370


>gi|153954198|ref|YP_001394963.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
           kluyveri DSM 555]
 gi|146347079|gb|EDK33615.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 444

 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 20/200 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E   +    +++  +++L           G    S    
Sbjct: 163 CNNFCAYC-----IVPYVRGRERSRKP--EDIENEIKELVSKGYKEVTLLGQNVNSYGKN 215

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + P+ N + +L    +   V     I  + ++P  +  +      +       I L VQS
Sbjct: 216 LNPRVNFSELL---RRINNVDGIERIRFMTSHPKDLTDDVIDVISECDKICEHIHLPVQS 272

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + RN++  + +A +   ++  P  S   D+I   P +T   +E  L  A   
Sbjct: 273 GSTRILKKMNRNYSKEQYLALVSEIKHKIPDASITTDIIVGFPGETEEDFEETLNLAEGV 332

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             D    +  +  +GT  YK
Sbjct: 333 EFDSAFTFIYSKREGTPAYK 352


>gi|256842238|ref|ZP_05547742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
 gi|301308989|ref|ZP_07214934.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
 gi|256736122|gb|EEU49452.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
 gi|300833015|gb|EFK63640.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
          Length = 444

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + Q + +  G + I       G       +
Sbjct: 160 CDYYCSYC---TIPFARGRSRNGTIASMVEQAQEVAR-KGGKEIVLTGVNIGDFGKSTDE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F  + K       + +QS  +  L+ 
Sbjct: 216 TFIDLIRALDEVEGIVRYRISSIEPNLITDEAIDFVAHSKRFAPHFHIPLQSGSDAVLQL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I   + + P   +  D+I     +T   +E   Q   S  +  L ++
Sbjct: 276 MRRRYDTALFRHKIEKIKEVMPHAFIGVDVIVGTRGETDEYFEEARQFIDSLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|219854806|ref|YP_002471928.1| hypothetical protein CKR_1463 [Clostridium kluyveri NBRC 12016]
 gi|219568530|dbj|BAH06514.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 454

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 20/200 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSL--- 83
           C   C YC     +  Y  G+E   +    +++  +++L           G    S    
Sbjct: 173 CNNFCAYC-----IVPYVRGRERSRKP--EDIENEIKELVSKGYKEVTLLGQNVNSYGKN 225

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           + P+ N + +L    +   V     I  + ++P  +  +      +       I L VQS
Sbjct: 226 LNPRVNFSELL---RRINNVDGIERIRFMTSHPKDLTDDVIDVISECDKICEHIHLPVQS 282

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + RN++  + +A +   ++  P  S   D+I   P +T   +E  L  A   
Sbjct: 283 GSTRILKKMNRNYSKEQYLALVSEIKHKIPDASITTDIIVGFPGETEEDFEETLNLAEGV 342

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             D    +  +  +GT  YK
Sbjct: 343 EFDSAFTFIYSKREGTPAYK 362


>gi|167766692|ref|ZP_02438745.1| hypothetical protein CLOSS21_01198 [Clostridium sp. SS2/1]
 gi|317497520|ref|ZP_07955839.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167711629|gb|EDS22208.1| hypothetical protein CLOSS21_01198 [Clostridium sp. SS2/1]
 gi|291558365|emb|CBL37165.1| SSU ribosomal protein S12P methylthiotransferase
           [butyrate-producing bacterium SSC/2]
 gi|316895203|gb|EFV17366.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 448

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K+C YC       R++      +Q  L E + +        +         G   +  
Sbjct: 157 CDKRCSYCIIPKIRGRFRSVP---MQELLNEAKRLASEGVKELVLVAQETTLYGKDLT-- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
             + + L+L  + K   +       +   P  +     +  +  +   N I + +Q  E 
Sbjct: 212 GEKQLPLLLHELCKIEGIEWIR--LLYCYPEEITDELIKVIKTEEKVCNYIDMPIQHSEN 269

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  +  + +A I   R   P ++    LI   P ++    E  +        D
Sbjct: 270 RILQRMGRRTSREDLVAVIKKLRKEIPDITIRTTLITGFPGESQEDHEGLMNFVEECQFD 329

Query: 201 HLSLYQLTIEKGT 213
            L ++  + E+ T
Sbjct: 330 RLGVFTYSPEEDT 342


>gi|325831383|ref|ZP_08164637.1| ribosomal protein S12 methylthiotransferase RimO [Eggerthella sp.
           HGA1]
 gi|325486637|gb|EGC89085.1| ribosomal protein S12 methylthiotransferase RimO [Eggerthella sp.
           HGA1]
          Length = 455

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C YC       RY+              + +   E+  + Q TG            
Sbjct: 175 CDRFCTYCTIPYIRGRYRSFPLDDVRADVAAQVAAGAREIVLIAQDTGRWGADFDE---- 230

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            PS        L     A            +   P  +               +   + +
Sbjct: 231 -PSS-------LAALVAALAEEFPQTWFRIMYIQPEGLSDELLDAVAAHDNVCDYFDIPL 282

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q ++   LR + R  +  E +A +   LA      +   LI   P +T  Q+E       
Sbjct: 283 QHVDAGILRAMNRTGSREEFLALVDRVLAHVPGATLRTTLIAGFPGETEEQFEDLCSFVE 342

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               D++ ++  + E+GT  + +    D
Sbjct: 343 EGLFDYVGVFPYSREEGTRAFDLPGQLD 370


>gi|309775596|ref|ZP_07670596.1| Fe-S oxidoreductase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916690|gb|EFP62430.1| Fe-S oxidoreductase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 157

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 47/114 (41%)

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+ + + + + R H  ++ +  I   ++   +++  L+ +LP +T  Q         S
Sbjct: 1   MQSIHDDTAQRINRGHTYAQFLDCIERLKSTDLKIAVHLMNSLPGETSGQMLQTAAALAS 60

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             +  + ++ L I +GT     +K     + S    +D+      +  A  +  
Sbjct: 61  LPIHAVKIHMLHIMEGTRMGIEYKKQPFPMLSREEYIDIVIRQLELLPAEIIIQ 114


>gi|57237512|ref|YP_178526.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           RM1221]
 gi|81353973|sp|Q5HW09|MIAB_CAMJR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|57166316|gb|AAW35095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           RM1221]
 gi|315057878|gb|ADT72207.1| tRNA-i(6)A37 methylthiotransferase [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 433

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEDLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|84386525|ref|ZP_00989552.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           splendidus 12B01]
 gi|84378630|gb|EAP95486.1| oxygen-independent coproporphyrinogen III oxidase, putative [Vibrio
           splendidus 12B01]
          Length = 291

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 10/227 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     +   K  +   I+    ++   R++        +  G      I  + +  
Sbjct: 30  CTFC----TMFDDKRFKVRDIKDIFEDIDAARKIYPHVESIFLVDGNVM--AIRTEMLIS 83

Query: 92  ILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           ILD I   +    N+ +    N       +  +  + AG++    G++S +   L  + +
Sbjct: 84  ILDYIKITFPEIKNISLYSGFNDFRRKSSSELKEIKSAGLSMAYSGLESGDPIVLERIQK 143

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLT 208
                 AI  ++LAR    ++    I+ L  +  ++               D ++   L 
Sbjct: 144 RMTREHAIEGMNLAREADIKVLASFIFGLGGKERSVEHAINTTSLLNIMQPDAIAPMALA 203

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           ++ G++  K    G+ VLP+    ++            G   Y   +
Sbjct: 204 VQPGSVLEKEVNRGEFVLPTPLQILEEEKYLLENLKDFG-CYYWGDH 249


>gi|285018048|ref|YP_003375759.1| 2-methylthioadenine synthetase [Xanthomonas albilineans GPE PC73]
 gi|283473266|emb|CBA15771.1| putative 2-methylthioadenine synthetase protein [Xanthomonas
           albilineans]
          Length = 470

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 26/202 (12%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG------------ 77
           C  YC F      R +     F    +   Q   Q  G R I+ +               
Sbjct: 177 CSKYCSFCVVPYTRGEEISRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGPYADAD 234

Query: 78  -GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
            G  P   +  ++ L++  IA+   +      T  ++P     +    YR      N + 
Sbjct: 235 VGEDP---QHADLGLLIRSIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLH 289

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           L VQ+  ++ L  + R + A E    I    A      +S D I   P +T   ++  ++
Sbjct: 290 LPVQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDIAISSDFIVGFPGETDADFDKTMR 349

Query: 193 RALSYAVDHLSLYQLTIEKGTL 214
                  D    +  +   GT 
Sbjct: 350 LIEDVGFDQSFSFIYSRRPGTP 371


>gi|224541752|ref|ZP_03682291.1| hypothetical protein CATMIT_00924 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525356|gb|EEF94461.1| hypothetical protein CATMIT_00924 [Catenibacterium mitsuokai DSM
           15897]
          Length = 435

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 72/202 (35%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +   + G  +  +     ++  ++L     +  +  G  T      +
Sbjct: 153 CNNFCTYC----IIPYARGGVRSRPKE--DVLRQAQELVDRGFVEIVLTGIHTAGYGVDL 206

Query: 85  EPQNIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E  +   +L D   K   +      +IE +   V     +   K+   V+ + + +QS  
Sbjct: 207 ENYSFYDLLVDLTTKIKGLKRLRISSIEMS--QVSDEIIELIGKSPIIVDHLHIPIQSGT 264

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR + R++N +E        +   P +S   D+I   P +T   +            
Sbjct: 265 DSILRRMARHYNTAEFEKKYFELKEALPGISITTDVIVGFPGETEEDFVDTYNWIKKLHF 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           + L ++  +  +GT   +M   
Sbjct: 325 NQLHVFPYSRRRGTPADRMPSQ 346


>gi|237785378|ref|YP_002906083.1| biotin synthase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758290|gb|ACR17540.1| biotin synthase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 354

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 24/201 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I + +   +   +             G    L
Sbjct: 90  CPEDCHFCAQSGLFESPVRSAWLD----IPALVEAAKQTAKTGATEFCIVAAVKGPDERL 145

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
           +    +   +        + + V+I + A+   +     +   KAGV+R +  +++    
Sbjct: 146 MS--QLEEAIAA------IKAEVDIEVAASIGILTKEQVERLAKAGVHRYNHNLETAKSY 197

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H+  +      + R+    +    I  +  +T+ Q      +      D
Sbjct: 198 FPHVVT----THSWEKRRETCEMVRDAGMEVCCGGIVGM-GETVEQRAEFAAQLAELRPD 252

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            + +  L    GT F      
Sbjct: 253 EVPMNFLDPRPGTPFANRPVM 273


>gi|153854183|ref|ZP_01995491.1| hypothetical protein DORLON_01482 [Dorea longicatena DSM 13814]
 gi|149753232|gb|EDM63163.1| hypothetical protein DORLON_01482 [Dorea longicatena DSM 13814]
          Length = 307

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 72/227 (31%), Gaps = 17/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C +C   S            + S   +++  +Q +  +   S    +F   T +    + 
Sbjct: 48  CIFC---SRGGSGDFAASRTL-SVTEQIEAGKQQSAKKYTGSSYIAYFQAYTNTYASLEY 103

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-----SLGVQSLEEQ 143
           +  +      +  +     ++I   P  +             NRI      LG+Q++ ++
Sbjct: 104 LETLYMEAITHPDIR---ILSIATRPDCLSEKILDLLENL--NRIKPVWVELGLQTIHDE 158

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           S R++ R +       A+   R     +    I  LP +T       ++      +  + 
Sbjct: 159 SARYIRRGYELPVFENAVSELRKRGIDVIVHTILCLPNETEQDILKTIEYLNHQDIQGIK 218

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  L + K T    ++      +P+      L  +  S      +  
Sbjct: 219 LQLLHVLKDTNLADIYLASPFYIPTPEEYYQLLGMCISHLRPDIVIH 265


>gi|291535877|emb|CBL08989.1| iron-only hydrogenase maturation protein HydE [Roseburia
           intestinalis M50/1]
          Length = 367

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 71/226 (31%), Gaps = 30/226 (13%)

Query: 4   LSAYENNMTGQGSNSLG--VYVH--WPF---CVKKCPYCDF---NSHVRRYKVGQENFIQ 53
           +   +      G    G  VY+     F   C   C YC     N H  RY++ +E  + 
Sbjct: 53  IQDLKQRARNTGDRIYGKNVYIRGLIEFTNYCKNDCLYCGIRRSNCHADRYRLTEEEILS 112

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
                     ++       +    GG       + I  I+  I   +      +  +  +
Sbjct: 113 CC--------KIGYELGFRTFVLQGGEDGFYTDEKICQIVSKIKAEYP-----DCAVTLS 159

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI----AAIHLARNIFP 169
                  ++Q Y  AG +R  L  ++ +E   + L   H A  +       +   + I  
Sbjct: 160 IGEKSRESYQAYFDAGADRYLLRHETADEAHYKKL---HPAEMSYQNRMRCLRDLKEIGY 216

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +     +   P QT+     +LQ         + +     +K T F
Sbjct: 217 QTGCGFMVGSPYQTVDTLWEDLQFIRRLKPQMVGIGPFIPQKDTPF 262


>gi|256026424|ref|ZP_05440258.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289764437|ref|ZP_06523815.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289715992|gb|EFD80004.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 307

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++       +++ +            +F   T +      +  
Sbjct: 43  CIFCSENGSGDFTSGRLKSIHTQIDEQIELVSNKYKGNK-YIAYFQNFTNTYANVNYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I      +  +   V + I   P  +E +  +   +        I LG+Q++ ++  ++ 
Sbjct: 102 IYGEALLHKNI---VGLAIATRPDCLEDDVLELLDELNKKTFLWIELGLQTINDEVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +              +  +    +I  LPK+    +      + +     L L+ + 
Sbjct: 159 NRAYKTKIYEEVTKKLNKLNIKFVTHIIIGLPKEKDDDYLKTAIFSQNSGTWGLKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + K T   K++K+G+L + ++  
Sbjct: 219 VVKNTPLEKLYKNGNLKVHTKEE 241


>gi|332828703|gb|EGK01395.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
           [Dysgonomonas gadei ATCC BAA-286]
          Length = 456

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPRSISSIFFGGGTP 81
           C K C YC            +    QS L E+  +R           ++++S  +     
Sbjct: 172 CDKVCSYC---IVPYTRGRERSRLPQSILNEVADLRDKGFKEVTLLGQNVNSYRYENEDG 228

Query: 82  SLIEPQNIALI--LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           ++++   +  I  L+        ++       + P+ +     +   K       I L V
Sbjct: 229 TVVDFSRLLEIVALEAPKMRIRFTT-------SYPTDMTDETLEVIAKYDNLCKFIHLPV 281

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R ++    +  I   + I     +S D++     +T    +  L    
Sbjct: 282 QSGSSRMLNVMKRKYDREWYLNRIEAIKRIIPGCGLSTDIMCGFHSETEEDQQETLSLMR 341

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               D   +++ +   GT   K 
Sbjct: 342 EVCFDSAFMFKYSERPGTFAAKK 364


>gi|289178890|gb|ADC86136.1| tRNA 2-methylthioadenosine synthase [Bifidobacterium animalis
           subsp. lactis BB-12]
          Length = 515

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 87/263 (33%), Gaps = 23/263 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L+ + + +    +++   +V     C   C +C            ++      L E++  
Sbjct: 191 LTLFPSQLPAHRASAHSAWVAISMGCNNTCTFC---IVPTTRGKERDRRPGDVLAEIRET 247

Query: 63  RQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                       ++++S  +G G     +    + +L    +   +          +P++
Sbjct: 248 VTNGAKEITLLGQNVNSYGYGIG-----DRYAFSKLLRACGEIEGLERVRF--TSPHPAA 300

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MS 172
              +      +    ++++   +QS  ++ LR + R++ +   +  +   R   P   +S
Sbjct: 301 FTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSERFLGILAKIREAMPDAQIS 360

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSEN- 230
            D+I   P +T   ++  L+            +  +   GT    M     D+ L     
Sbjct: 361 TDIIVGFPGETEEDFQQTLRVVEEARFSSAFTFIYSPRPGTPAAAMEQVPYDVALDRLER 420

Query: 231 VAVDLYNLTQSITSAHGLHAYEI 253
           +      +T+ I         E+
Sbjct: 421 LLAVQERITEEILEKFVGRDVEV 443


>gi|227824689|ref|ZP_03989521.1| RNA modification enzyme [Acidaminococcus sp. D21]
 gi|226905188|gb|EEH91106.1| RNA modification enzyme [Acidaminococcus sp. D21]
          Length = 435

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C + C YC            +   + S   E++ + +      +        +G  T   
Sbjct: 156 CDQYCSYC---IIPYARGHLRSRPLSSIRREVEHLTEEGYKEVVLLGIHLGCYGKET--- 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               N   + D ++   +V +   + +       V+    +  ++       + L +QS 
Sbjct: 210 ---ANGERLSDAVSAALSVPALCRLRLGSLESVEVQPELLRLMQEDPRFCCHLHLPLQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ + R ++ +     I   R   P ++   D+I   P +T   +   L  A +  
Sbjct: 267 CDKILKAMNRPYDTARFKELIDRIRAAVPDVAITTDIIVGFPGETEADFAQTLTFAEACG 326

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + ++  +  KGT   + 
Sbjct: 327 FAKIHIFPYSKRKGTPAAER 346


>gi|322806672|emb|CBZ04241.1| ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
           [Clostridium botulinum H04402 065]
          Length = 445

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +Y+  ++   ++ L E++ + +      +  I       ++    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRKK---ENILKEVENLAKQG----VREIILIAQDTTMYGID 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 209 IYGKKVLHELLRDISKVEGVKWIR--LLYCYPEEITKELIEEIKNNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIINIIKKLRKEIEGITLRTSLIVGFPGETEGEFSELKEFVSDVK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT      +   +       E + +   ++++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREEEIMILQQSISKDINKEKIGKIYEV 384


>gi|307564743|ref|ZP_07627271.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella amnii CRIS
           21A-A]
 gi|307346465|gb|EFN91774.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella amnii CRIS
           21A-A]
          Length = 442

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 62/198 (31%), Gaps = 11/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C   C YC            +   ++S L E+  +++           ++   G  P+  
Sbjct: 155 CNNFCHYC---IVPFTRGRERSRDVESILQEVNDLKERGFKEVTLLGQNVNSYGLLPNGK 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
            P+N     + + K      N+ +     NP  +  +            N I    QS  
Sbjct: 212 RPKNGTSFAELLQKVAQSVPNMRVRFTTSNPEDMTEDILHVVAQEDNLCNHIHFPAQSGS 271

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +   E +  +   R+I P      D+      +++      L        
Sbjct: 272 NTVLKDMNRKYTREEYLEKVAAIRSIIPNCGLTTDIFVGYHNESIEDHHQTLDLVREVGF 331

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   K
Sbjct: 332 DSAFMFKYSERPGTYAAK 349


>gi|254561595|ref|YP_003068690.1| hypothetical protein METDI3182 [Methylobacterium extorquens DM4]
 gi|254268873|emb|CAX24834.1| conserved hypothetical protein, radical SAM domain protein
           [Methylobacterium extorquens DM4]
          Length = 249

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 9/194 (4%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F          +   +     E + +    G    +++    G  +L     + 
Sbjct: 15  CPFTCSFCEWGTMESPKRVRAVDHLTQEFEAIA---GHDVYAALLVDAGL-NLNRNAFLN 70

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
             L   A+         +  E  P++V   +           + +G+QS +   L  + R
Sbjct: 71  --LRRAAEESGFFERHGLICEVYPAAVRQEHLDFLATVSNAYVGIGLQSFDNAVLAHVDR 128

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            ++            +    ++ ++I  LP      +    +RA       L +Y   + 
Sbjct: 129 TYDERRFDETFAKL-DAVASLAVEIILGLPGDNPETFRRNFERARRL-PCALRVYHCVVL 186

Query: 211 KGTLFYKMHKDGDL 224
              L  +   +  L
Sbjct: 187 PSGLMVRSPPEHRL 200


>gi|21356207|ref|NP_650002.1| CG6345 [Drosophila melanogaster]
 gi|32129453|sp|Q9VGZ1|CK5P1_DROME RecName: Full=CDK5RAP1-like protein
 gi|7299338|gb|AAF54531.1| CG6345 [Drosophila melanogaster]
 gi|17945319|gb|AAL48716.1| RE15838p [Drosophila melanogaster]
          Length = 583

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 45/144 (31%), Gaps = 4/144 (2%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P        +  R       ++ L  QS   Q L  + R ++    +  +   R  
Sbjct: 352 TSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQF 411

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +    D I     +T  +++  +        +   L+  ++ + T  ++ +KD   +
Sbjct: 412 LPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRYKDDVPI 471

Query: 226 LPSENVAVDLYNLTQSITSAHGLH 249
                    +  + +   +     
Sbjct: 472 NVKNERLQRMVQVFREGATQLHRK 495


>gi|301631123|ref|XP_002944656.1| PREDICTED: (Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB-like, partial [Xenopus (Silurana) tropicalis]
          Length = 437

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 14/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C K C YC       R +     F    +       Q     ++     + + G    + 
Sbjct: 148 CSKYCSYC--VVPYTRGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYRGAMGNTA 205

Query: 84  IEPQ--NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              +  + AL+L+ +A+   +      T  ++P+       + Y K    V+ + L VQ 
Sbjct: 206 ENGEKADFALLLEYVAEIPGIERIRYTT--SHPNEFTPRLIEAYAKIPKLVSHLHLPVQH 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L  + R ++A E  + +    A      MS D I   P +T   ++  ++     
Sbjct: 264 GSDRILMAMKRGYSAMEYKSTVRKLRAIRPDMAMSSDFIVGFPGETEEDFQKMMKLIHDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKMH 219
             D+   +  +   GT    + 
Sbjct: 324 RFDNSFSFIFSPRPGTPAANLP 345


>gi|257463913|ref|ZP_05628299.1| biotin synthase [Fusobacterium sp. D12]
 gi|317061440|ref|ZP_07925925.1| predicted protein [Fusobacterium sp. D12]
 gi|313687116|gb|EFS23951.1| predicted protein [Fusobacterium sp. D12]
          Length = 348

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C ++C YC     + RY    E +    +  L   +  ++L       +    GG    
Sbjct: 63  YCKRECRYCG----INRYNQKVERYRLSEEEILRTCEKAKELG----FHTFVLQGGEDVY 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + + +  ++  I K +      +  +  +       ++Q  ++AGV+R  L  +++  +
Sbjct: 115 FQDELLVPLVKKIKKKYP-----DFALTLSVGERSRKSYQLLKEAGVDRFLLRHETIVPE 169

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + L         +  +   +++  ++    +  LP      +  +L      +     
Sbjct: 170 IYKTLHPQSELRTRVECLEHLKSLGYQIGAGFMVGLPAYENKDYVKDLLFLKRLSPHMTG 229

Query: 204 LYQLTIEKGTLFYK 217
           +        T    
Sbjct: 230 IGPFIPHHDTELGN 243


>gi|255659775|ref|ZP_05405184.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM
           20544]
 gi|260847845|gb|EEX67852.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM
           20544]
          Length = 455

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 79/244 (32%), Gaps = 27/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFGGGTPS 82
           C  +C +C            +   I+    E++ + +  G R +      S  +G     
Sbjct: 154 CNNRCAFCA---IPYIRGDYRSRRIEDICDEVRHLTE-NGVREVVLIAQDSTEYGRD--- 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L     ++ +L  I K   +      T+ + P        +           + L +Q  
Sbjct: 207 LYGAPKLSELLREIVKVPKLQWVR--TLYSYPKYFSDELIETIASEPKICKYVDLPLQHA 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  LR + R     E  A I   R   P ++     I   P +T  Q+           
Sbjct: 265 HDAVLRSMRRPDTQEEMRALIKKLRERIPGVTIRSTFIVGFPGETDAQYHTLRNFIEEMR 324

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           +D + ++  + E+GT  Y M        P++     +      + S     + +I N S 
Sbjct: 325 LDKVGVFTYSREEGTPAYDM--------PNQVPEEIMQERYHDLMSLQCKISEQI-NQSL 375

Query: 259 LGAE 262
            G E
Sbjct: 376 EGKE 379


>gi|77918109|ref|YP_355924.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77544192|gb|ABA87754.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 569

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C             +  ++S+ +  +Q        R +  I     T +  + 
Sbjct: 190 CPYRCAFC---------MSALDTRVRSYSMPRIQTDLLYLITREVPCIKLVDRTFNY-DA 239

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQS 144
           +    I   I +N   S       E     ++        +A  +  +  +GVQS   ++
Sbjct: 240 ERARDIFQFILENNRTSR---FHFEIGAHLLDDATLSLLEQAPPDTFQFEIGVQSTLPKT 296

Query: 145 LRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R  +  +  A  + L R     +  DLI  LP Q    +   + R +     HL 
Sbjct: 297 LEAISRETSLEKLEANVLRLRRADNIHLHLDLIAGLPGQGSASFLESVDRVMELRPHHLQ 356

Query: 204 LYQLTIEKGTLFYK 217
           L  + +  G    +
Sbjct: 357 LEPVKLLPGAPLRR 370


>gi|58039893|ref|YP_191857.1| putative oxidoreductase [Gluconobacter oxydans 621H]
 gi|58002307|gb|AAW61201.1| Putative oxidoreductase [Gluconobacter oxydans 621H]
          Length = 400

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 68/201 (33%), Gaps = 14/201 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-------SSIFFGGGT 80
           C  +C +C            +   ++  +   + + +      +       S    GG  
Sbjct: 120 CDHRCTFC---IIPYGRGDSRSTPVEDAIARAEALVEAGHQEIVLTGVDIASWQGSGGKG 176

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
              +  + +  +     +   +SS   + ++A     ++          +  + L +Q+ 
Sbjct: 177 LGALCRELLRRV--DGVRRLRLSSIDPVLLDAQTGDADLWWLLENEPRLMPHLHLSLQAG 234

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R H+ +   A +   R+I P   +  DLI   P +T   +E          
Sbjct: 235 SDLILKRMKRRHDTAGVAATLRRVRSIRPETGVGADLIAGFPTETNALFEETRAFIEEQQ 294

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           +  L ++  +   GT   +M 
Sbjct: 295 IPFLHVFPYSERPGTPAARMP 315


>gi|148266100|ref|YP_001232806.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146399600|gb|ABQ28233.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 462

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 84/236 (35%), Gaps = 18/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C        Y++ +    +S  + ++ +R L     I+ I F      L+  +
Sbjct: 202 CPFTCNFC--------YRLDEGFRPRSNASIIEEIRMLKRNYGITYIAFSDEL--LMSSE 251

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                L        +  +++       +  +       ++AG   I+ G+++ ++  L+ 
Sbjct: 252 ARVTALCEDFIRENL--DIKWDCNGRLNYAKPELLALMKRAGCVFINYGIEAFDDVILKN 309

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY--AVDHLSLY 205
           + +    S+ +  I     +     F++I+    ++       +   L Y       ++ 
Sbjct: 310 MNKALTTSQIVRGIEATLAVGISPGFNIIFGNIGESRESLRKGVDFLLKYDDGAQMRTIR 369

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
            +T   G   Y    +  LV   E+   + + L   + + +     E+S+  F  A
Sbjct: 370 PVTPYPGAPLYYHAIEKGLVGDCEDFYANKH-LNSDLLAVNFT---ELSDEEFHAA 421


>gi|310658457|ref|YP_003936178.1| adenosylcobamide-dependent radical sam superfamily protein
           [Clostridium sticklandii DSM 519]
 gi|308825235|emb|CBH21273.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium sticklandii]
          Length = 601

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 6/147 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAA 160
           +  +    E     ++    +  ++   G+ +  +GVQS   ++++ + R  N  +    
Sbjct: 265 NGKINFHFEITAHMLDDEFMKEIKEARYGLFQFEIGVQSTNSKTIKTVNRIDNFEKLSVR 324

Query: 161 IHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
           ++  +         DLI  LP + +  ++       +   + L L  L + KG+      
Sbjct: 325 VNQIKKYGNIHQHLDLIAGLPYENLESFKKSFNDVFALLPEALQLGFLKMLKGSPIKSQV 384

Query: 220 KDGDL---VLPSENVAVDLYNLTQSIT 243
           +  D      P   V  + +     I 
Sbjct: 385 ELFDYRYRNYPPYEVISNKFISAIEIL 411


>gi|153808740|ref|ZP_01961408.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185]
 gi|149128566|gb|EDM19784.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185]
          Length = 439

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +        G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQ-AGQAAAEGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSRSRSFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 KLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETEEYFEEAYQFIAGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|77918818|ref|YP_356633.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pelobacter
           carbinolicus DSM 2380]
 gi|123756643|sp|Q3A594|MIAB_PELCD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|77544901|gb|ABA88463.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelobacter carbinolicus
           DSM 2380]
          Length = 438

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 15/235 (6%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
              C   C YC    HVR  +V + +        ++ +R L    +      G    S  
Sbjct: 154 IQGCDNFCSYC-IVPHVRGREVSRPS-----AEVLEEVRLLVEQGAREITLIGQNVNSYG 207

Query: 85  EPQNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             ++  +    + +       +E    + ++P  +       +         I L VQ+ 
Sbjct: 208 CKEDDEISFASLLRKVAEVDGLERIRFMTSHPKDLSDELIDCFADLDKLCKHIHLPVQAG 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R +   + +  I   R + P +    D+I   P +T +++E  +       
Sbjct: 268 GDAVLKAMRRGYTRDQYLGRIERLRRVCPEIRMTSDVIVGFPGETESEFEQTMDLLERAR 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +  +  +   GT    +    D +            L          H  +I
Sbjct: 328 FTEIYSFIFSARPGTSAADLP---DDIPKEVKQQWFDRMLALQEEITRQYHQMDI 379


>gi|295094473|emb|CBK83564.1| iron-only hydrogenase maturation protein HydE [Coprococcus sp.
           ART55/1]
          Length = 363

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     NSHV RY++  +  +                    +    GG     
Sbjct: 81  CKNDCYYCGIRKSNSHVDRYRLTMDQILAC--------ADEGYVLGFRTFVLQGGEDGGF 132

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + IA I+  I + +     V ++   +P       ++ +R AG +R  L  ++ +   
Sbjct: 133 SDEAIADIVRCIKERYP-DCAVTLSFGEHPY----ETYRLWRMAGADRYLLRHETADRVH 187

Query: 145 LRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              L   + +    +  ++  +++  ++    +   P QT      +L          + 
Sbjct: 188 YERLHPDSMSYDNRVRCLYNLKSLGYQVGSGFMVGSPYQTPVNLAEDLHFLAKLQPQMIG 247

Query: 204 LYQLTIEKGTLFYKM 218
           +      K T F KM
Sbjct: 248 IGPYVPHKETPFAKM 262


>gi|255323483|ref|ZP_05364614.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter showae
           RM3277]
 gi|255299520|gb|EET78806.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter showae
           RM3277]
          Length = 436

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 75/240 (31%), Gaps = 31/240 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C KKC YC     +  +  G E  I + L  ++ +++     +      G   
Sbjct: 146 YINISIGCDKKCTYC-----IVPHTRGDEISIPANL-ILREVKKAAEGGAKEIFLLGQNV 199

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-----------NPSSVEVNNFQGYRKAG 129
                  N      G  +    S  +    E            +P  ++    + + +  
Sbjct: 200 ------NNYGKRFSGTHEKIDFSDLLVKISEIEGVERIRFTSPHPLHMDDKFLEIFSQNP 253

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + LR + R +     +      R + P +S   D+I A P +T  
Sbjct: 254 KICKSMHMPLQSGSTKVLREMKRGYTKEWFLDRAGRLRAMCPEVSISTDIIVAFPSETDE 313

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++E  +        + +  ++ +    T    F     +         +      +   I
Sbjct: 314 EFEDTMDVLEKVRFEQIFSFKYSPRPMTKAAEFTNQIPEAVASARLTRLQSRHNEILDEI 373


>gi|160915016|ref|ZP_02077229.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991]
 gi|158432815|gb|EDP11104.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991]
          Length = 435

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 70/205 (34%), Gaps = 19/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-----GGTPS 82
           C + C YC     +  Y  G E  +      ++  +QL   + +  +  G      G  +
Sbjct: 153 CNQFCSYC-----IIPYARGAERSLAE-DQVIESAKQLVNNQHLEIVLTGIHTGRYGNGT 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 + L+   +A+   +      +IE N   +        ++       + + +Q+ 
Sbjct: 207 --GRNLLDLLKRLVAEVPKLRRIRISSIEMN--EISDELIAFMKEEPRIARHLHIPLQAA 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +     +  +   R+    +S   D+I   P+++  ++    +      
Sbjct: 263 SNTVLQRMRRPYTVEWFMERVAYIRSQIADISISSDVITGFPQESEEEFMEGYRNIEEMQ 322

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           +  L ++  +    T   KM    D
Sbjct: 323 LSFLHVFPYSKRDFTDAAKMPGHLD 347


>gi|148555302|ref|YP_001262884.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Sphingomonas
           wittichii RW1]
 gi|229891001|sp|A5V8Y0|MIAB_SPHWW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|148500492|gb|ABQ68746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sphingomonas wittichii
           RW1]
          Length = 453

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C YC                  + + E + +    G R I+ +       +  +  
Sbjct: 167 CDKFCTYC---VVPYTRGAEISRPWGAIVDEAKALVD-AGAREITLLGQNVNAWTGEDDR 222

Query: 87  ---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              Q +  ++  +     ++     T  ++P+ +       + +    +  + L VQ+  
Sbjct: 223 GRTQGLDGLIRALDALPGLARIRYTT--SHPNDMSDGLIAAHGEVAKLMPFLHLPVQAGS 280

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R+H+A+  +  I   R   P ++   D I   P +T   +E  L    +   
Sbjct: 281 DRILKAMNRSHDAAGYLRLIERVRAARPDIAVSGDFIVGFPGETDEDFEATLAIVRAVDH 340

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                ++ +   GT    M
Sbjct: 341 AQAFSFKYSPRPGTPAASM 359


>gi|305433013|ref|ZP_07402169.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter coli JV20]
 gi|304443714|gb|EFM36371.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter coli JV20]
          Length = 433

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPLNIIYKEAQKAVDKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + + K  
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLEVFAKNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   Q L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSQILKAMKRGYTKEWYLDRALKLRELCPNVSISTDIIVAFPGESDK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  ++       + +  ++ +    T    M    D
Sbjct: 312 DFEETMEVLEKVRFEQMFSFKYSKRPLTKAATMPNQID 349


>gi|229891229|sp|Q3SFF1|MIAB_THIDA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 446

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C +C       R +     F            +     ++          +L E  
Sbjct: 156 CSKYCTFC--VVPYTRGEEVSRPFDDVIAEVANLAARGVKEITLLGQNVNAYQGALDEGG 213

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L+ + +   V      T  ++P  +     + Y K    V+ + L VQS  ++
Sbjct: 214 TADFAFLLEMVHEIPGVERIRYTT--SHPREMTQRLIECYGKLPKLVSHLHLPVQSGSDR 271

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H   E  + +   R     +    D I   P +T   +E  ++       D 
Sbjct: 272 ILAAMKRGHTVLEFKSIVRKLREQRSDLCLSSDFIVGFPGETGADFEATMKLVEELNFDA 331

Query: 202 LSLYQLTIEKGTL 214
              +  +   GT 
Sbjct: 332 SFSFIYSKRPGTP 344


>gi|212690608|ref|ZP_03298736.1| hypothetical protein BACDOR_00094 [Bacteroides dorei DSM 17855]
 gi|212666854|gb|EEB27426.1| hypothetical protein BACDOR_00094 [Bacteroides dorei DSM 17855]
          Length = 378

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +     T ++  R+       + +  GG  P  +  +
Sbjct: 95  CRNNCYYCG----IRKGNPAVARYALKRETILECCREGYALGFRTFVMQGGEDP-ALTDK 149

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +  I   ++     +  I  +        ++ + +AG NR  L  ++  EQ  R 
Sbjct: 150 WIEATVAAIRNEFS-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETHNEQHYRK 204

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   + I  +    ++   P QT+     +L     +    + +  
Sbjct: 205 LHPEEMSLKHRLQCLQWLKEIGYQTGTGIMVGSPGQTLPHLVEDLLFIEQFHPQMIGIGP 264

Query: 207 LTIEKGTLFYKMH 219
                 T F    
Sbjct: 265 FIPHHETPFGMEP 277


>gi|74318724|ref|YP_316464.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thiobacillus
           denitrificans ATCC 25259]
 gi|74058219|gb|AAZ98659.1| tRNA-i(6)A37 modification enzyme MiaB [Thiobacillus denitrificans
           ATCC 25259]
          Length = 461

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C K C +C       R +     F            +     ++          +L E  
Sbjct: 171 CSKYCTFC--VVPYTRGEEVSRPFDDVIAEVANLAARGVKEITLLGQNVNAYQGALDEGG 228

Query: 87  -QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L+ + +   V      T  ++P  +     + Y K    V+ + L VQS  ++
Sbjct: 229 TADFAFLLEMVHEIPGVERIRYTT--SHPREMTQRLIECYGKLPKLVSHLHLPVQSGSDR 286

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R H   E  + +   R     +    D I   P +T   +E  ++       D 
Sbjct: 287 ILAAMKRGHTVLEFKSIVRKLREQRSDLCLSSDFIVGFPGETGADFEATMKLVEELNFDA 346

Query: 202 LSLYQLTIEKGTL 214
              +  +   GT 
Sbjct: 347 SFSFIYSKRPGTP 359


>gi|146279874|ref|YP_001170032.1| hypothetical protein Rsph17025_3872 [Rhodobacter sphaeroides ATCC
           17025]
 gi|229890629|sp|A4WZB3|MIAB_RHOS5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145558115|gb|ABP72727.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 436

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E  +      +    +    + +  I   G   +     
Sbjct: 158 CDKFCAFC-----VVPYTRGAE--VSRPFARLMAEARALVEKGVREITLLGQNVNAWSND 210

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +A+   +      T  ++P+ +  +  + + +    +  + L VQS  ++
Sbjct: 211 GRGLGGLIRELARIDGLERLRYTT--SHPNDMADDLIEAHGQEPKLMPYLHLPVQSGSDR 268

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R H A + +  +   R   P +    D I   P +T   +E  L    +     
Sbjct: 269 ILKAMNRKHAAEQYLRLVERIRAARPDILLTSDFIVGFPGETDADFEATLALIRAVGFGS 328

Query: 202 LSLYQLTIEKGTLFYKMH 219
              ++ +   GT   +  
Sbjct: 329 AFSFKYSARPGTPAAEKP 346


>gi|323141956|ref|ZP_08076812.1| radical SAM domain family protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322413570|gb|EFY04433.1| radical SAM domain family protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 260

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 72/208 (34%), Gaps = 5/208 (2%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIE 111
           +    ++       G   +  +F   G   ++    +  IL  + + +  +         
Sbjct: 13  EEISRQIALAAHY-GKNKVRRVFLADGDALVLPTAKLLKILQVLREQFPHLQRVASYAAP 71

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
            +         +  ++AG+  +  G+++ ++ +L+ + +  +  +A+ A         ++
Sbjct: 72  KDILRKSEEELRQLKEAGLKLLYYGMETGDDATLKAVNKGVDGEQAVEAGRRVTASGMKL 131

Query: 172 SFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV-LPS 228
           S  +I  L     +        +        HLS   L + +G+     ++ G    L  
Sbjct: 132 SMMIILGLAGAEGSERHALATAKAINIIKPTHLSALCLMLYRGSELLDQYEAGKFNPLSP 191

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNH 256
             +  +L  + ++I      H    SNH
Sbjct: 192 AGLMRELKLIIENIDLPADRHCLFRSNH 219


>gi|294776168|ref|ZP_06741657.1| MiaB-like protein [Bacteroides vulgatus PC510]
 gi|294449991|gb|EFG18502.1| MiaB-like protein [Bacteroides vulgatus PC510]
          Length = 432

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 76/222 (34%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C +KC YC       R+     E  I         + +      I    + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRHISRPMEEIIDEVKL---LVSEGVKEFQIIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ IA    V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KSQKLPELIERIANVPGVEWIRLHY--AYPAHFPEELFRVMREHDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R+ + +E    I   R   P +     L+   P +T   +E   +       D
Sbjct: 259 NMLNKMRRHVSKAETYELIEKFRREIPGIHLRTTLMVGHPGETEEDFEELKEFVKKVRFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +  + E+GT   K ++D       +    +L  L Q I
Sbjct: 319 RMGAFAYSEEEGTFAAKEYEDSISHEVKQQRLDELMALQQEI 360


>gi|255654758|ref|ZP_05400167.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-23m63]
 gi|296449504|ref|ZP_06891281.1| radical SAM domain protein [Clostridium difficile NAP08]
 gi|296878173|ref|ZP_06902188.1| radical SAM domain protein [Clostridium difficile NAP07]
 gi|296261568|gb|EFH08386.1| radical SAM domain protein [Clostridium difficile NAP08]
 gi|296430926|gb|EFH16758.1| radical SAM domain protein [Clostridium difficile NAP07]
          Length = 584

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 73/237 (30%), Gaps = 21/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          +    +    L  ++   +      +S I F   T +    +
Sbjct: 186 CPFNCQYC------LSSTIPGLRYFS--LERIKRDLKALIDARVSQIKFIDRTFNA-NRK 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
               I+D + KN           E     ++    +       G+ +  +GVQS  E++L
Sbjct: 237 VAMEIMDFLMKNDN--GYTTYHFEVTAYLIDDKMLEFLADCKEGLFQFEIGVQSTNEKTL 294

Query: 146 RFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +GR  +  +    +   A         DLI  LP +    +E       +  ++HL L
Sbjct: 295 DAVGRRDDFKKLSHVVQTVASYRNIHQHLDLIAGLPYEDYKSFENSFNDVFNLGIEHLQL 354

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS----AHGLHAYEIS 254
             L + KGT   K    H              + Y   +           L  Y  S
Sbjct: 355 GFLKMIKGTGMRKVADEHGFKYKDYAPYEFLYNNYISYEETLKLKDIEDILERYYNS 411


>gi|222823363|ref|YP_002574937.1| tRNA-i(6)A37 thiotransferase [Campylobacter lari RM2100]
 gi|222538585|gb|ACM63686.1| tRNA-i(6)A37 thiotransferase [Campylobacter lari RM2100]
          Length = 432

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 77/245 (31%), Gaps = 19/245 (7%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFF 76
           YV+    C K C YC     V   +  + +     + +        G + I     ++  
Sbjct: 143 YVNISIGCDKHCTYC----IVPHTRGDEISIPFEIIKKEALKAVANGAKEIFLLGQNVNN 198

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRI 133
            G   S           D + K   +     I     +P  ++    + + K       +
Sbjct: 199 YGKRFS--NAHEKINFSDLLEKLSEIEGLERIRFTSPHPLHMDDRFLEVFSKNPKVCKSM 256

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFP-RMSFDLIYALPKQTMTQWEMEL 191
            + +QS   + L+ + R +     +  A+ L        +S D+I A P ++   +E  +
Sbjct: 257 HMPLQSGSSEILKAMKRGYTKEWYLDRALKLRSMCKDVSISTDVIVAFPGESDKDFEDTM 316

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN---VAVDLYNLTQSITSAHGL 248
                   + +  ++ +    T    M       + S+    +      +   I +    
Sbjct: 317 DVLEKVRFEQMFSFKYSKRPLTKAATMPNQIPDDIASKRLSILQARHTEILDEIVAKQKD 376

Query: 249 HAYEI 253
             +E+
Sbjct: 377 KEFEV 381


>gi|150002616|ref|YP_001297360.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
 gi|254881421|ref|ZP_05254131.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294777900|ref|ZP_06743343.1| MiaB-like protein [Bacteroides vulgatus PC510]
 gi|319642808|ref|ZP_07997446.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
 gi|149931040|gb|ABR37738.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
 gi|254834214|gb|EET14523.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294448253|gb|EFG16810.1| MiaB-like protein [Bacteroides vulgatus PC510]
 gi|317385552|gb|EFV66493.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
          Length = 438

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I+  + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGRIEEIVEQARQAAA-EGGKEIVITGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +   +  A +    + +QS  +  L
Sbjct: 215 SFFDLVKALDQVAGIERYRISSIE--PNLLTDEIIEYVSRSRAFMPHFHIPLQSGSDDVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + I   + I P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 KLMRRRYDTALFASKIRKIKEIMPDAFIGVDVIVGTRGETEEYFEDAYRFIEGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|291277351|ref|YP_003517123.1| putative MiaB-like tRNA modifying enzyme YliG [Helicobacter
           mustelae 12198]
 gi|290964545|emb|CBG40398.1| putative MiaB-like tRNA modifying enzyme YliG [Helicobacter
           mustelae 12198]
          Length = 438

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 91/262 (34%), Gaps = 20/262 (7%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           +L+  +      GS  +  Y+     C + C +C   S   + K      I+S L E+Q 
Sbjct: 121 FLADEKKERIITGSR-IHAYIKISEGCNQACSFCSIPSFKGKLKSRS---IESVLKEIQN 176

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEP----QNIALILDGIAKNWTVSSNVEITIEANPSSV 117
           + Q          F    + S +        +  ++  I +     S   + +   PS+ 
Sbjct: 177 LSQRGYQ---DFTFIAQDSSSYLRDHGVKDGLVQLIGAIEEQGLARSARMLYL--YPSTT 231

Query: 118 EVNNFQGYRKAGV--NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD- 174
             +     R + +  N   + +Q +  + L+ + R  +    I  +H  R +        
Sbjct: 232 TPHLIAVIRDSKIFQNYFDMPIQHIHAKMLKRMKRGVSKERHIELLHAMRAVPDSFVRST 291

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENV 231
           +I   P ++  ++         +  D L+++  + E+G+      +      +    + +
Sbjct: 292 IIIGHPGESEEEFAELCSFLEDFVFDRLNVFAFSSEEGSAADLMEEKIPTKIINQRIKKI 351

Query: 232 AVDLYNLTQSITSAHGLHAYEI 253
              L    + I ++     YE+
Sbjct: 352 EQILKKQQKRILNSMIGKQYEV 373


>gi|228471151|ref|ZP_04055970.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas uenonis
           60-3]
 gi|228307091|gb|EEK16165.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas uenonis
           60-3]
          Length = 452

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 22/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +  Y  G+E      S + E+Q M Q  G R ++ +  G    S   
Sbjct: 164 CDNFCTYC-----IVPYTRGRERSRDPESIIREVQRMAQ-EGYREVTLL--GQNVNSYCW 215

Query: 86  PQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                     A +L  +A+              +P  ++    +   +     + I   +
Sbjct: 216 HTETGASYTFADLLRSVAEAVPTMRIRF--TSPHPKDMKDETLEVMSRYHNICSHIHFPL 273

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R +     +  +   R+  P   +S D+      +T   ++  L+   
Sbjct: 274 QSGSNRILERMRRRYTREWYLERVERIRDYMPDCGLSTDVFCGFSGETEEDFQETLEVMR 333

Query: 196 SYAVDHLSLYQLTIEKGTL 214
              +D   +++ +   GT 
Sbjct: 334 LARLDSAFMFKYSERPGTY 352


>gi|255284510|ref|ZP_05349065.1| radical SAM protein, family [Bryantella formatexigens DSM 14469]
 gi|255264946|gb|EET58151.1| radical SAM protein, family [Bryantella formatexigens DSM 14469]
          Length = 349

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 71/211 (33%), Gaps = 21/211 (9%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFF 76
           C  +        C +C   S     +   +  +     +++  ++    +  +     +F
Sbjct: 47  CPNRDGTVGTGGCIFC---SAGGSGEFAADKRLP-VAEQLRIQKEALREKKSARKYIAYF 102

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---I 133
              T +      +  I     ++      V +++   P  +  +  +   +    +   +
Sbjct: 103 QAYTNTYAPVDYLEKIFTEAIED---DEVVILSVATRPDCLPADVLELLGRLNRRKPVWV 159

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            LG+Q++  Q+ RF+ R +  S    A+   R+    +    I  LP +   +    +  
Sbjct: 160 ELGLQTIHPQTARFIRRGYGLSCFETAVRGLRSRGIEVIVHTILGLPGEGRREMLETIGY 219

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                +  + L  L I +GT    ++    +
Sbjct: 220 LNDAGIQGIKLQLLHILRGTDLGALYLQQSM 250


>gi|219683412|ref|YP_002469795.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|241191145|ref|YP_002968539.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196551|ref|YP_002970106.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|219621062|gb|ACL29219.1| RNA modification enzyme, MiaB family protein [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249537|gb|ACS46477.1| hypothetical protein Balac_1121 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251105|gb|ACS48044.1| hypothetical protein Balat_1121 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794134|gb|ADG33669.1| hypothetical protein BalV_1081 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 491

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 88/263 (33%), Gaps = 23/263 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L+ + + +    +++   +V     C   C +C            ++      L E++  
Sbjct: 167 LTLFPSQLPAHRASAHSAWVAISMGCNNTCTFC---IVPTTRGKERDRRPGDVLAEIRET 223

Query: 63  RQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                       ++++S  +G G     +    + +L    +   +          +P++
Sbjct: 224 VTNGAKEITLLGQNVNSYGYGIG-----DRYAFSKLLRACGEIEGLERVRF--TSPHPAA 276

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MS 172
              +      +    ++++   +QS  ++ LR + R++ +   +  +   R   P   +S
Sbjct: 277 FTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSERFLGILAKIREAMPDAQIS 336

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSENV 231
            D+I   P +T   ++  L+            +  +   GT    M     D+ L     
Sbjct: 337 TDIIVGFPGETEEDFQQTLRVVEEARFSSAFTFIYSPRPGTPAAAMEQVPYDVALDRLER 396

Query: 232 AVDLYN-LTQSITSAHGLHAYEI 253
            + +   +T+ I         E+
Sbjct: 397 LLAVQERITEEILEKFVGRDVEV 419


>gi|167762164|ref|ZP_02434291.1| hypothetical protein BACSTE_00516 [Bacteroides stercoris ATCC
           43183]
 gi|167699807|gb|EDS16386.1| hypothetical protein BACSTE_00516 [Bacteroides stercoris ATCC
           43183]
          Length = 753

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 66/199 (33%), Gaps = 15/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLI 84
           C + C +C  +SH   Y    + + + S    ++   Q    + ++       G  PS  
Sbjct: 62  CPENCKWCAQSSH---YHTQADVYNLLSAEECLKQ-AQYNERQDVNRFSLVTSGRKPS-- 115

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P+ +  + + +      SS   I + A+   +     +    AGV R    +++     
Sbjct: 116 -PKQLEQLCNTVRYMRRHSS---IQLCASLGLLAEEELRALHNAGVTRYHCNLET-APSF 170

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L   H   + +  +  ARN    +    I  +  +TM Q            V  + +
Sbjct: 171 FPTLCSTHTQEDKLRTLQAARNAGMDICSGGIIGM-GETMEQRIEFAFTLKELGVQSIPI 229

Query: 205 YQLTIEKGTLFYKMHKDGD 223
             L+   GT         +
Sbjct: 230 NLLSPIPGTPLENRPPLTE 248


>gi|148251981|ref|YP_001236566.1| putative MiaB-like tRNA modifying enzyme [Bradyrhizobium sp. BTAi1]
 gi|146404154|gb|ABQ32660.1| putative MiaB-like tRNA modifying enzyme [Bradyrhizobium sp. BTAi1]
          Length = 434

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 13/200 (6%)

Query: 28  CVKKCPYC--DF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C +C   F   NS         +  +++          LTG   +    +G   P 
Sbjct: 153 CDHRCTFCIIPFGRGNSRSVPMGAVVDQ-VRALAARGHAEIVLTG---VDLTSYGHDLPG 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
              P+   L+   +     +      +I++  +  ++ +        +  + L +Q+ ++
Sbjct: 209 --TPKLGRLVKQILRHVPELQRLRISSIDSIEADADLLDALADDARLMPHLHLSLQAGDD 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R H+ ++A+A     R + P +    DLI   P +T   +   L+      + 
Sbjct: 267 LILKRMKRRHSRADAVAFCDHVRLLRPDIALGADLIAGFPTETEDMFVRSLELVEECGLA 326

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
            L ++  +   GT   +M +
Sbjct: 327 FLHVFPYSPRPGTPAARMPQ 346


>gi|220927941|ref|YP_002504850.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998269|gb|ACL74870.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 575

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 70/246 (28%), Gaps = 32/246 (13%)

Query: 28  CVKKCPYC---DFN--SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC    FN        +V ++ +       +++  +L      +          
Sbjct: 187 CPFSCSYCISSTFNGVRFFSLERVKRDIY-----RILEYKPRLIKFVDRTFNCHK----- 236

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSL 140
                      + +    +++       EA     +       RKA   RI L  G+Q++
Sbjct: 237 -------ERAKEILRFLASLNCETVFHFEAAADLFDSEMLHILRKAPKGRIQLEIGIQTI 289

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             Q+L+ + R  +       +    +     +  DLI  LP +    ++           
Sbjct: 290 NTQTLKEIDRITDIDLLTENVKKILSGGNIHVHLDLIAGLPYEDFKSFKKSFNHVYGLKP 349

Query: 200 DHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSIT----SAHGLHAYE 252
             L L  L + KG+   K    H           V  + Y     I            Y 
Sbjct: 350 HQLQLGFLKMLKGSRIRKNSQKHSFYFRDNAPYEVLKNKYISYDEILLLKDVEETFERYY 409

Query: 253 ISNHSF 258
            SN   
Sbjct: 410 NSNRFK 415


>gi|257791372|ref|YP_003181978.1| MiaB-like tRNA modifying enzyme YliG [Eggerthella lenta DSM 2243]
 gi|257475269|gb|ACV55589.1| MiaB-like tRNA modifying enzyme YliG [Eggerthella lenta DSM 2243]
          Length = 455

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C YC       RY+              + +   E+  + Q TG            
Sbjct: 175 CDRFCTYCTIPYIRGRYRSFPLDDVRADVAAQVAAGAREIVLIAQDTGRWGADFDE---- 230

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            PS        L     A            +   P  +               +   + +
Sbjct: 231 -PSS-------LAALVAALAEEFPQTWFRIMYIQPEGLSDELLDAVAAHDNVCDYFDIPL 282

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q ++   LR + R  +  E +A +   LA      +   LI   P +T  Q+E       
Sbjct: 283 QHVDAGILRAMNRTGSREEFLALVDRVLAHVPGATLRTTLIAGFPGETEEQFEDLCSFVE 342

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               D++ ++  + E+GT  + +    D
Sbjct: 343 EGLFDYVGVFPYSREEGTRAFDLPGQLD 370


>gi|183601356|ref|ZP_02962726.1| hypothetical protein BIFLAC_01822 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|183218962|gb|EDT89603.1| hypothetical protein BIFLAC_01822 [Bifidobacterium animalis subsp.
           lactis HN019]
          Length = 492

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 88/263 (33%), Gaps = 23/263 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L+ + + +    +++   +V     C   C +C            ++      L E++  
Sbjct: 168 LTLFPSQLPAHRASAHSAWVAISMGCNNTCTFC---IVPTTRGKERDRRPGDVLAEIRET 224

Query: 63  RQLTG------PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
                       ++++S  +G G     +    + +L    +   +          +P++
Sbjct: 225 VTNGAKEITLLGQNVNSYGYGIG-----DRYAFSKLLRACGEIEGLERVRF--TSPHPAA 277

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MS 172
              +      +    ++++   +QS  ++ LR + R++ +   +  +   R   P   +S
Sbjct: 278 FTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMRRSYRSERFLGILAKIREAMPDAQIS 337

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM-HKDGDLVLPSENV 231
            D+I   P +T   ++  L+            +  +   GT    M     D+ L     
Sbjct: 338 TDIIVGFPGETEEDFQQTLRVVEEARFSSAFTFIYSPRPGTPAAAMEQVPYDVALDRLER 397

Query: 232 AVDLYN-LTQSITSAHGLHAYEI 253
            + +   +T+ I         E+
Sbjct: 398 LLAVQERITEEILEKFVGRDVEV 420


>gi|168184612|ref|ZP_02619276.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|237795842|ref|YP_002863394.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
           str. 657]
 gi|182672297|gb|EDT84258.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|229260716|gb|ACQ51749.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
           str. 657]
          Length = 445

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +Y+  ++   ++ L E++ + +      +  I       ++    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRKK---ENILKEVENLAKQG----VKEIILIAQDTTMYGID 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 209 IYGKKVLHELLRDISKVKGVKWIR--LLYCYPEEITNELIEEIKSNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIINIIKKLRKEIEGITLRTSLIVGFPGETEGEFSELKEFVSDIK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT      +   +       E + +   ++++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREEEIMILQQSISKDINKEKIGKIYEV 384


>gi|56695195|ref|YP_165541.1| MiaB-like tRNA modifying enzyme [Ruegeria pomeroyi DSS-3]
 gi|56676932|gb|AAV93598.1| MiaB-like tRNA modifying enzyme [Ruegeria pomeroyi DSS-3]
          Length = 418

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 21/217 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDRGYNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  +     +  +   +IE     V+ N  QG       +  + L +Q
Sbjct: 202 AQPKLGDLVMRILRLVPDLPRLRISSIDSIE-----VDENLMQGIATEPRLMPHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+    
Sbjct: 257 HGDDLILKRMKRRHLRDDAIRFAEEARRLRPEMTFGADIIAGFPTETEAHFENSLKLVDD 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             +  L ++  +  +GT   K+    +  +  E  A 
Sbjct: 317 CHLTWLHVFPYSRREGTPAAKIPSQVNGKIIKERAAR 353


>gi|29346323|ref|NP_809826.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|81445146|sp|Q8A9A2|RIMO_BACTN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|29338218|gb|AAO76020.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 436

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I++   V         A P+    + F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIERISEIPGVEWIRLHY--AYPAHFPTDLFRVMRERDNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R  +  +    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 KLMRRQVSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKARFDRMG 321

Query: 204 LYQLTIEKGTLFYKMH 219
            +  + E+GT   + +
Sbjct: 322 AFAYSEEEGTYAAQQY 337


>gi|150391795|ref|YP_001321844.1| radical SAM domain-containing protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149951657|gb|ABR50185.1| Radical SAM domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 436

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 11/189 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C K+C YC     +R+       +  +    M+ + QL     I ++    G       
Sbjct: 157 YCKKECNYCG----IRKGCTTPSRYRMTEDEIMESVYQLHQ-WGIKTVILQSGEDDYYTT 211

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  I+  I +   +       +  +      + +Q  R+AG N   L +++   Q   
Sbjct: 212 DMLIQIITRIKRETKM------GVTLSIGEKSYDEYQFLREAGTNNFLLKIETTNRQIFE 265

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           F+  + N    I      R +        +  LP QT      ++       +  + +  
Sbjct: 266 FIHPDDNYDTRIQCSEWLRELGYANGSGNMIGLPGQTEEDIAEDILFFKKMRIHMIGIGP 325

Query: 207 LTIEKGTLF 215
               KGT F
Sbjct: 326 FIPAKGTPF 334


>gi|315652320|ref|ZP_07905312.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
 gi|315485443|gb|EFU75833.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
          Length = 327

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 17/193 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     NS+  RY++ ++  ++                   +    GG     
Sbjct: 40  CKNDCYYCGIRHSNSNCDRYRLSEDEILEC--------ADEGYRLGYRTFVMQGGEDGKF 91

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           EP+ I  I+  I   +      ++ +  +    E + +Q    AG +R  L  ++ ++  
Sbjct: 92  EPEYICDIVRKIKNKYK-----DVAVTLSLGEYERDEYQKMFDAGADRYLLRHETADKAH 146

Query: 145 LRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              L     +    +  +   + I  ++    +   P Q+      +L+    +      
Sbjct: 147 YEKLHPKQMSFDHRMKCLQDLKEIGFQVGCGFMVGSPYQSSATLAKDLKFIEEFGPHMCG 206

Query: 204 LYQLTIEKGTLFY 216
           +        T F 
Sbjct: 207 IGPFIPHHDTAFR 219


>gi|294791811|ref|ZP_06756959.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella sp. 6_1_27]
 gi|294793672|ref|ZP_06758809.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella sp. 3_1_44]
 gi|294455242|gb|EFG23614.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella sp. 3_1_44]
 gi|294457041|gb|EFG25403.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella sp. 6_1_27]
          Length = 437

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++      +   + +  L    +   + F  GT 
Sbjct: 154 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTDLGVKGFKEITLLGQNVNSYGLDFKDGT- 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 212 ------DFGTLIDALDGIPGIERIRY--MTSHPQDMSKSMIDALGRSSNIVTHLHLPIQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++        +   R     +    D+I   P +T   ++  LQ     
Sbjct: 264 GSNRILKKMNRHYTVEHYKELLSYCREKIKDVVVTTDIIVGFPGETEEDFQATLQLLKDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 324 RYDMAYTFIYSKRSGTPAATM 344


>gi|283955880|ref|ZP_06373370.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283792540|gb|EFC31319.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 433

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 144 YINISIGCDKHCTYC-----IVPHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQ--- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLKVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKEWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMPNQID 349


>gi|237756214|ref|ZP_04584778.1| biotin synthase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691624|gb|EEP60668.1| biotin synthase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 333

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 17/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C  +SH   YK     +        L   +    +   R    +         
Sbjct: 65  CTEDCSFCAQSSH---YKTPINAYGLVNKDEMLAGAEKAVAINANRYCIVVSGRRA---- 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I D + +   +  +  I +  +  +++  +    + AGV+RI+  +++ E  
Sbjct: 118 -SKEEVDKIADAVKE---IKESYPIKVCCSLGTIDEEDLAKLKDAGVDRINHNLETSEIY 173

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + +   H   E    I   + +        I+ +  ++               VD + 
Sbjct: 174 FPKIVS-THTWKERYETIKKIQKVGLSTCTGGIFGM-GESDEDIVDLAMTYRDLKVDSIP 231

Query: 204 LYQLTIEKGTLFYKMHKDGDLVL 226
           L  L    GT     H    L  
Sbjct: 232 LNFLIPIPGTPLGDKHGLTPLKC 254


>gi|3820554|gb|AAC84027.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase BchE
           [Heliobacillus mobilis]
          Length = 566

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 26/210 (12%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGP 68
           Y++ P             C   C +C      R Y+V   + F+    T       L   
Sbjct: 186 YIYIPLNTRVAVPNFARGCPFTCRFCSQWKFWRTYRVRNPKKFVDEIET-------LVKD 238

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYR 126
             +         P++    N    +    +      +V   I    + +  + +    YR
Sbjct: 239 HKVGFFILADEEPTI----NRDKFVAMCQELIDRKLDVHWGINTRVTDILRDAHLLPFYR 294

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
           KAG+  ISLG ++  + +L    +     E   AI + +          I  L  +T+  
Sbjct: 295 KAGLVHISLGTEAATQMNLDRFRKETTMEENKRAIDMIKANGMVAEAQFIMGLENETVET 354

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
            E   Q A  +  D ++    T    +  +
Sbjct: 355 IEETFQLARYWDADMVNWNMYTPWPFSELF 384


>gi|327540187|gb|EGF26778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
           WH47]
          Length = 479

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C YC     V   +  ++   +S    +   R L    ++     G    S     
Sbjct: 172 CDKFCTYC----VVPNTRGPEQG--RSPEEIVSEARVLAEQGALEITLLGQTVNSYRHRG 225

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           P     +   + +   +     I    N P  +     +  R        + +  QS  +
Sbjct: 226 PDGETDMAGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRDLPKVSPYLHVPAQSGSD 285

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +  ++ +        I P   +S D I     +T   ++  ++        
Sbjct: 286 AVLKRMKRGYTIADYMEMFERIETILPEASVSSDFIVGFCGETDEDFQKSVKLIERCRFK 345

Query: 201 HLSLYQLTIEKGT 213
           +  ++Q ++ +GT
Sbjct: 346 NSFIFQYSVREGT 358


>gi|312877354|ref|ZP_07737319.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795828|gb|EFR12192.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 535

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 80/228 (35%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFAPLEKVFEELDYL----FKKEVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S   ++  E +P+ ++ +       +  N  R+ +G+QS   Q+L
Sbjct: 215 RSIKIIEFCKQK---SQATQVHFEIDPTLLDNDVISAINNSKDNLFRLEIGLQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R ++       +         +   DLI  LP +    ++  L + + Y  D + L
Sbjct: 272 DAINRFYDIDRIDKNLKKLMENKKAIVHLDLIAGLPYEDFLSFKRSLNKTILYFADEVQL 331

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             L + KGT        +       P   V  + +   + I     + 
Sbjct: 332 GFLKMLKGTKIREEAAKYNYEFFKDPPYEVISNSFISFEEIYKLKKME 379


>gi|296164454|ref|ZP_06847027.1| biotin synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900188|gb|EFG79621.1| biotin synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 344

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 59/198 (29%), Gaps = 24/198 (12%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR  ++     + S +   +   +             G     
Sbjct: 80  CPEDCHFCSQSGLFASPVRSARLD----VPSLVEAAKQTAKSGATEFCIVAAVRG----- 130

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +       A    + + VEI I  +   +     +     GV+R +  +++    
Sbjct: 131 -PDERLMA--QVAAGIEAIRNEVEINIACSLGMLTAEQVEQLAAMGVHRYNHNLETARSF 187

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 188 FTNVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETLEQRAEFAAELAELGPD 242

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + L  L    GT F  +
Sbjct: 243 EVPLNFLNPRPGTPFGDL 260


>gi|237744655|ref|ZP_04575136.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229431884|gb|EEO42096.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 307

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 68/203 (33%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++       +++ +            +F   T +      +  
Sbjct: 43  CIFCSENGSGDFTSGRLKSIHTQIDEQIELVSNKYKGNK-YIAYFQNFTNTYANVNYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I      +  +   V + I   P  +E +  +   +        I LG+Q++ ++  ++ 
Sbjct: 102 IYGEALLHKNI---VGLAIATRPDCLENDVLELLDELNKKTFLWIELGLQTINDEVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +              +  +    +I  LPK+    +      +       L L+ + 
Sbjct: 159 NRAYKTKIYEEVTKKLNKLNIKFVTHIIIGLPKEKDDDYLKTAIFSQHCGTWGLKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + K T   K++K+G+L + ++  
Sbjct: 219 VVKNTPLEKLYKNGNLKVHTKEE 241


>gi|327453856|gb|EGF00511.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL083PA2]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|327330240|gb|EGE71989.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL097PA1]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|315080658|gb|EFT52634.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL078PA1]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|313807502|gb|EFS45989.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL087PA2]
 gi|313818544|gb|EFS56258.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL046PA2]
 gi|313820311|gb|EFS58025.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL036PA1]
 gi|313822882|gb|EFS60596.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL036PA2]
 gi|313825186|gb|EFS62900.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL063PA1]
 gi|314925198|gb|EFS89029.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL036PA3]
 gi|314960019|gb|EFT04121.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL002PA2]
 gi|314978441|gb|EFT22535.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL072PA2]
 gi|314988142|gb|EFT32233.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL005PA2]
 gi|314989946|gb|EFT34037.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL005PA3]
 gi|315084330|gb|EFT56306.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL027PA2]
 gi|315085672|gb|EFT57648.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL002PA3]
 gi|315088906|gb|EFT60882.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL072PA1]
 gi|327331955|gb|EGE73692.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL096PA3]
 gi|327443156|gb|EGE89810.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL013PA2]
 gi|328753487|gb|EGF67103.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL020PA1]
 gi|332675417|gb|AEE72233.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
           [Propionibacterium acnes 266]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|313792158|gb|EFS40259.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL110PA1]
 gi|313801889|gb|EFS43123.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL110PA2]
 gi|313838715|gb|EFS76429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL086PA1]
 gi|314962816|gb|EFT06916.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL082PA1]
 gi|315078033|gb|EFT50084.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL053PA2]
 gi|327453124|gb|EGE99778.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL092PA1]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|313772146|gb|EFS38112.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL074PA1]
 gi|313810010|gb|EFS47731.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL083PA1]
 gi|313830338|gb|EFS68052.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL007PA1]
 gi|313833712|gb|EFS71426.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL056PA1]
 gi|314973343|gb|EFT17439.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL053PA1]
 gi|314976020|gb|EFT20115.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL045PA1]
 gi|314983958|gb|EFT28050.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL005PA1]
 gi|315096258|gb|EFT68234.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL038PA1]
 gi|327326170|gb|EGE67960.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL096PA2]
 gi|327445942|gb|EGE92596.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL043PA2]
 gi|327448079|gb|EGE94733.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL043PA1]
 gi|328760608|gb|EGF74175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL099PA1]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|299144166|ref|ZP_07037246.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518651|gb|EFI42390.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 435

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 15/203 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +   +    +  +S    M   R+L        I  G    S    I
Sbjct: 155 CNRYCTYC----IIPFARGNIRS--RSIEDSMNEARKLAKAGYKEIILTGIHIGSYGYDI 208

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             + +  +++ IA    +      +IE  P ++  +  +         +   L +QS   
Sbjct: 209 GKERLIDLIENIASIDGIERIRLSSIE--PRTITDDFMKRVVATNKLCDHFHLSLQSGSN 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   E      + R+  P   ++ D+I   P +T   +             
Sbjct: 267 KILKEMNRKYTREEYFDKTQIIRSYMPYAGLTTDVIVGFPGETDDDFLDSYDLIKKVEFS 326

Query: 201 HLSLYQLTIEKGTLFYKMHKDGD 223
            + +++ +   GT+  KM    D
Sbjct: 327 KVHVFKYSKRDGTVAAKMKNQID 349


>gi|289427275|ref|ZP_06428991.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           J165]
 gi|289159744|gb|EFD07932.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           J165]
          Length = 497

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 144 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 199

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 200 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 250

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 251 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 310

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 311 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 357


>gi|289425065|ref|ZP_06426842.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           SK187]
 gi|289154043|gb|EFD02731.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           SK187]
          Length = 497

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 144 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 199

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 200 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 250

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 251 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 310

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 311 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 357


>gi|253681895|ref|ZP_04862692.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
           [Clostridium botulinum D str. 1873]
 gi|253561607|gb|EES91059.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
           [Clostridium botulinum D str. 1873]
          Length = 576

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 72/232 (31%), Gaps = 29/232 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C   C YC             +N     + +++   +    + +  + F   T +  E  
Sbjct: 199 CPYGCKYC--------LSSVDKNLRFRNIDKVKQELKYFIDKKVRLVKFVDRTFNANEKF 250

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQ 143
             +I   L          ++ +   E + + +     +   K+   R+    GVQ+    
Sbjct: 251 AIDIWRFLAEQ------DTDTKFHFEISANILTKGQMEILSKSPKGRLQFEVGVQTTNNN 304

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R+ N       +   + +   +S   DLI  LP + M  +        +   + 
Sbjct: 305 ILKNINRHVNFENIQEKVEEVQKLH-NISQHLDLIAGLPGENMESFIHSFNDVYAIRPEE 363

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           + L  L + KG+          +                 I S   +  YE+
Sbjct: 364 IQLGFLKLLKGSPMLSEKDKWGMKYSPYPP--------YEILSTKDISYYEL 407


>gi|295130577|ref|YP_003581240.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           SK137]
 gi|291375467|gb|ADD99321.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           SK137]
          Length = 497

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 144 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 199

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 200 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 250

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 251 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 310

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 311 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 357


>gi|50842500|ref|YP_055727.1| MiaB family protein [Propionibacterium acnes KPA171202]
 gi|81611809|sp|Q6A8Z7|MIAB_PROAC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|50840102|gb|AAT82769.1| MiaB family protein [Propionibacterium acnes KPA171202]
 gi|313764472|gb|EFS35836.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL013PA1]
 gi|313812959|gb|EFS50673.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL025PA1]
 gi|313816010|gb|EFS53724.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL059PA1]
 gi|313827761|gb|EFS65475.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL063PA2]
 gi|314915464|gb|EFS79295.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL005PA4]
 gi|314918252|gb|EFS82083.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL050PA1]
 gi|314920065|gb|EFS83896.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL050PA3]
 gi|314932079|gb|EFS95910.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL067PA1]
 gi|314955740|gb|EFT00140.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL027PA1]
 gi|314958155|gb|EFT02258.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL002PA1]
 gi|314967816|gb|EFT11915.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL037PA1]
 gi|315098519|gb|EFT70495.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL059PA2]
 gi|315105399|gb|EFT77375.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL030PA1]
 gi|315108344|gb|EFT80320.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL030PA2]
 gi|328754531|gb|EGF68147.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL025PA2]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNTP 354


>gi|146337530|ref|YP_001202578.1| putative MiaB-like tRNA modifying enzyme [Bradyrhizobium sp.
           ORS278]
 gi|146190336|emb|CAL74332.1| putative MiaB-like tRNA modifying enzyme [Bradyrhizobium sp.
           ORS278]
          Length = 443

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 73/204 (35%), Gaps = 21/204 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPS- 82
           C  +C +C            +   + + + +++ + +      + +      +G   P  
Sbjct: 153 CDHRCTFC---IIPYGRGNSRSVPMGAVVDQVRTLAERGHAEIVLTGVDLTSYGADLPGT 209

Query: 83  ----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
               L+  Q +  + +      +   ++E   +   +  +           +  + L +Q
Sbjct: 210 PKLGLLVKQILRHVPELKRLRISSIDSIEADADLLDALADDARL-------MPHLHLSLQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           + ++  L+ + R H  ++AIA     R + P +    DLI   P +T   +   L    +
Sbjct: 263 AGDDLILKRMKRRHVRADAIAFCDQVRRLRPDIALGADLIAGFPTETEEMFTRSLDLVEA 322

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHK 220
             +  L ++  +   GT   +M +
Sbjct: 323 CGLTLLHVFPYSPRPGTPAARMPQ 346


>gi|15644349|ref|NP_229401.1| hypothetical protein TM1601 [Thermotoga maritima MSB8]
 gi|4982172|gb|AAD36668.1|AE001804_12 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 551

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 38/221 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIFFG----G 78
           C ++  +C F +    +   +   +Q+ L E++ +     R     R+ + + FG    G
Sbjct: 184 CERR-TFCSFCTEPLLHGRLKSRDVQAILKEIESLYRAGCRAFRFGRAANILAFGSDRNG 242

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV---------EVNNFQGYRKAG 129
           G PS   P+ +  +  G  +       +     ANPS +          V     Y   G
Sbjct: 243 GKPS---PEILEELYSGTREVAPHLEVLHTD-NANPSYLVTYEKECRKIVETIVRYNTPG 298

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM---------SFDLIYALP 180
            +  S GV+S +E  L+      +  E + AI +   I               +LI+ LP
Sbjct: 299 -DVFSFGVESFDENVLKKNNVQGSPEEFLKAIAVVNEIGGVRVDGIPKLLPGVNLIFGLP 357

Query: 181 KQTMTQWEMELQRALSYAVD-----HLSLYQLTIEKGTLFY 216
            +T    +           +      +++ +L    GT  Y
Sbjct: 358 GETEETLKKNYSYLKRILDEGYLLRRINIRKLLAYPGTPVY 398


>gi|327450799|gb|EGE97453.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL087PA3]
 gi|328754218|gb|EGF67834.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL087PA1]
          Length = 494

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 80/226 (35%), Gaps = 27/226 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLVTFPSNLPARRDSAYSAWVSISVGCNNTCTFC----IVPQLRGKETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVNEGVQEITLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
              ++ D+I   P +T   +   ++            +Q +I   T
Sbjct: 308 HAAITTDIIVGFPGETDKDFAETMRIVEESRFSAAFTFQYSIRPNT 353


>gi|291190604|ref|NP_001167148.1| CDK5 regulatory subunit-associated protein 1-like 1 [Salmo salar]
 gi|223648364|gb|ACN10940.1| CDK5 regulatory subunit-associated protein 1-like 1 [Salmo salar]
          Length = 562

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 75/232 (32%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        E  ++      Q         S  +  +G    + + 
Sbjct: 209 CLNACTYCK-TKHARGDLASYPVEELVERARQSFQEGVCEIWLTSEDTGAYGKDIGTDL- 266

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 267 PTLLWRLVEEIPEGAMLRLGM-----TNPPYI-LEHLEEMSKILNHPRVYAFLHVPVQSA 320

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R + A +        ++  P ++   D+I   P +T   ++        Y 
Sbjct: 321 SDSVLMDMKREYCADDFRRVADFLKDKVPGITIATDIICGFPGETDADFQETCDLVKEYR 380

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   KM       +P++        L+    S +  H 
Sbjct: 381 FPSLFINQFYPRPGTPAAKM-----DQVPAQLKKQRTKELSALFHSYNPYHH 427


>gi|158520382|ref|YP_001528252.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158509208|gb|ABW66175.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 289

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 89/235 (37%), Gaps = 12/235 (5%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C       R+K+  ++ I   ++++++  +    +    I  G     +I  
Sbjct: 25  CSHNKCTFCAAYK-GERFKIKSDDII---MSDIEFAARHCRNQDRLFICDGDAL--IIPQ 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  IL  I +     + V +       +          R  G+    +G++S ++++L
Sbjct: 79  KRLLAILKEIEQKLPWVNRVGVYANTKGIAMKTSEELAELRAHGLKIAYMGLESGDDETL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW--EMELQRALSYAVDHLS 203
           + + +  ++ + I      R     +S  ++  L  +  ++   +   +   +   +++ 
Sbjct: 139 KAVNKGADSQKMIDMGKKIRAAGVALSITVLLGLAGRERSEIHAQKTGEVLSAIDPEYVG 198

Query: 204 LYQLTIEKGTLFYKMHK--DGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              L +  GT  Y  +      ++ P E +      +T +  S    HA   SN+
Sbjct: 199 ALSLMLIPGTPLYDEYAAGRFPILTPEETLVELRTMITHTNLSNGLFHANHASNY 253


>gi|91762485|ref|ZP_01264450.1| tRNA-i(6)A37 modification enzyme [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718287|gb|EAS84937.1| tRNA-i(6)A37 modification enzyme [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 455

 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 19/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIE 85
           C K C +C     V  Y  G E + + F   +   ++L    +   I  G      S  E
Sbjct: 167 CDKFCHFC-----VVPYTRGPE-YSRPFDQIINEAKELVQSGAKEIILLGQNVNAYSYDE 220

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + D + K  +      I     +P  +  +    Y+ +   +  + L VQS   
Sbjct: 221 EGKEYRLSDLLIKLDSFDKLERIRYTTSHPKDMTDDLINVYKTSSKLMPLVHLPVQSGSN 280

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H   E +      R I P++  S D I   P++    ++M ++        
Sbjct: 281 KILNLMNRKHTIEEYLLVYEKLRKINPKIEFSSDFIIGYPEEDEQDFKMTMELIEKVKFI 340

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +   +  +   GT+         L L  +  +     + Q     + + 
Sbjct: 341 NSYSFIFSPRPGTVAAN------LTLVDQKKSKQRLEIIQEKLFNNQIK 383


>gi|156741566|ref|YP_001431695.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseiflexus castenholzii DSM 13941]
 gi|156232894|gb|ABU57677.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Roseiflexus castenholzii DSM 13941]
          Length = 527

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 24/197 (12%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      R+Y+V       +F+ E++    L    
Sbjct: 186 YIYIPLNVRVAVPNFARGCPFTCRFCSQWKFWRKYRVRDPI---AFVDEIEL---LVREY 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRK 127
            +         P++    +    +    +       +   I    + +  +      YR+
Sbjct: 240 KVGFFILADEEPTI----HRKKFVAMCEELERRKLGIHWGINTRVTDILRDEQYLPLYRR 295

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  +SLG ++  + +L    +     +   AI L  +         I  L  +T    
Sbjct: 296 AGLVHVSLGTEAAAQMNLDRFRKETTIEQNKRAIKLLHDQGIVAEAQFIMGLENETPETI 355

Query: 188 EMELQRALSYAVDHLSL 204
           E   + AL +  D  + 
Sbjct: 356 EETYRYALDWKADMANW 372


>gi|71083088|ref|YP_265807.1| tRNA-i(6)A37 modification enzyme [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|123775533|sp|Q4FNN5|MIAB_PELUB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|71062201|gb|AAZ21204.1| tRNA-i(6)A37 modification enzyme [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 446

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 19/229 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIE 85
           C K C +C     V  Y  G E + + F   +   ++L    +   I  G      S  E
Sbjct: 158 CDKFCHFC-----VVPYTRGPE-YSRPFDQIINEAKELVQSGAKEIILLGQNVNAYSYDE 211

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + D + K  +      I     +P  +  +    Y+ +   +  + L VQS   
Sbjct: 212 EGKKYRLSDLLIKLDSFDKLERIRYTTSHPKDMTDDLINVYKTSSKLMPLVHLPVQSGSN 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R H   E +      R I P++  S D I   P++    ++M ++        
Sbjct: 272 KILNLMNRKHTIEEYLLVYEKLRKINPKIEFSSDFIIGYPEEDEQDFKMTMELIEKVKFI 331

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +   +  +   GT+         L L  +  +     + Q     + + 
Sbjct: 332 NSYSFIFSPRPGTVAAN------LTLVDQKKSKQRLEIIQEKLFNNQIK 374


>gi|332522915|ref|ZP_08399167.1| radical SAM protein, TIGR01212 family [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314179|gb|EGJ27164.1| radical SAM protein, TIGR01212 family [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 306

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 66/200 (33%), Gaps = 11/200 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     S   ++F   T +    + I  
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVSRYLVYFQNFTNTHASLEVIKE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +       V   V I I   P  +            +     + LG+Q+  E++ + +
Sbjct: 103 RYEQAIFEPGV---VGINIGTRPDCLPDEVISYLAELAEKMHVTVELGLQTTYEETSQLI 159

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+       +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 160 NRAHSYELYQETVKRLRRYPKIEVVAHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHL 219

Query: 207 LTIEKGTLFYKMHKDGDLVL 226
           L +   T   + + +G L L
Sbjct: 220 LHLMTNTRMQRDYHEGRLQL 239


>gi|291543604|emb|CBL16713.1| MiaB-like tRNA modifying enzyme [Ruminococcus sp. 18P13]
          Length = 440

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 4/130 (3%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR- 170
           P  +  +  +          +  L +QS  +++LR + R++  +E        R IFP  
Sbjct: 232 PEKLSDDLLRRLAAHPQFCPQFHLSLQSGCDRTLRAMNRHYTTAEYADLAARIRRIFPDA 291

Query: 171 -MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
            ++ D++   P +T   +   L+         + ++  +  +GT+  +M +         
Sbjct: 292 ALTTDVMVGFPGETEADFACSLEFVREMGFAKVHVFPYSPREGTVAARMPEQIPSPEKRR 351

Query: 230 NVAVDLYNLT 239
             A+      
Sbjct: 352 RAALMGETAA 361


>gi|253568256|ref|ZP_04845667.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842329|gb|EES70409.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 306

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 16  CDRKCSYCAIPIITGRHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYYGVD--LYKKQ 73

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I++   V         A P+    + F+  R+       + + +Q + +  L
Sbjct: 74  MLPELIERISEIPGVEWIRLHY--AYPAHFPTDLFRVMRERDNVCKYMDIALQHISDNML 131

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R  +  +    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 132 KLMRRQVSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKARFDRMG 191

Query: 204 LYQLTIEKGTLFYKMH 219
            +  + E+GT   + +
Sbjct: 192 AFAYSEEEGTYAAQQY 207


>gi|218780005|ref|YP_002431323.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218761389|gb|ACL03855.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 468

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 77/247 (31%), Gaps = 30/247 (12%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C +F  H R  K   E+ +Q               R I  +     T ++ E 
Sbjct: 205 CPFSCGFCYNFRKHYRARKP--EDVVQELAA--------IRDRGIRDVEICDDTFTVNED 254

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +A+    + +   +S      I++          +  +KAGV  ++ G++S  ++ L 
Sbjct: 255 RALAIFDLIVKERLDIS----FRIKSRVDVFTEKLAKAGKKAGVYLVAFGMESGSQKILD 310

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +    +++  A  L +          +   P +T    E  ++  L       +L  
Sbjct: 311 AMNKKITLAQSAEACRLTKKYGIAAHSSWVIGYPGETPDTVEDTVRFILKNKPATANLAV 370

Query: 207 LTIEKGTLFYK-------MHKDGDLV--------LPSENVAVDLYNLTQSITSAHGLHAY 251
           L     T  Y+       +               LP       L +L            Y
Sbjct: 371 LRPYPNTPAYEIAKESGDLMGQWSPHASDMPWVRLPWAQDKKILDDLCTRSIKRIYFTPY 430

Query: 252 EISNHSF 258
             +  + 
Sbjct: 431 YTAAFAR 437


>gi|150009019|ref|YP_001303762.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Parabacteroides distasonis ATCC 8503]
 gi|255014851|ref|ZP_05286977.1| putative tRNA-i(6)A37 modification enzyme MiaB [Bacteroides sp.
           2_1_7]
 gi|262383912|ref|ZP_06077048.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_33B]
 gi|298375748|ref|ZP_06985704.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 3_1_19]
 gi|229890584|sp|A6LEM6|MIAB_PARD8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|149937443|gb|ABR44140.1| conserved hypothetical protein, putative tRNA-i(6)A37 modification
           enzyme MiaB [Parabacteroides distasonis ATCC 8503]
 gi|262294810|gb|EEY82742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_33B]
 gi|298266785|gb|EFI08442.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 3_1_19]
          Length = 457

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 26/209 (12%)

Query: 23  VHWPF-------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL------TGPR 69
           VH          C   C YC            +   I+S L E++ M +          +
Sbjct: 160 VHISGFVSIMRGCNNFCTYC---IVPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQ 216

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
           +++S  F     ++       ++LD +AK          T  ++P  +  +  +      
Sbjct: 217 NVNSYSFEKEGETI----TFPILLDRVAKEVPDMRIRFTT--SHPKDMSDDTLRVIAAND 270

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMT 185
                I L  QS   + L+ + R +     +  I   R I P   +S DL      +T  
Sbjct: 271 NICKFIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRIVPDCAISTDLFCGFHSETEE 330

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTL 214
            ++  L        D   L++ +   GT 
Sbjct: 331 DYQETLSLMREVGYDSAFLFKYSERPGTY 359


>gi|218960782|ref|YP_001740557.1| Fe-hydrogenase assembly protein (partial, N-terminal),
           S-adenosylmethionine(SAM) radical protein [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729439|emb|CAO80350.1| Fe-hydrogenase assembly protein (partial, N-terminal),
           S-adenosylmethionine(SAM) radical protein [Candidatus
           Cloacamonas acidaminovorans]
          Length = 372

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +R      + +  S+   +    +L       SI    G     E  
Sbjct: 67  CSKNCYYCG----IRSGNKELKRYQISYEEAIA-EAKLCQQMHYGSIVIQAG-----ERN 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR---KAGVNRISLGVQSLEEQS 144
           +   I         +    E  +     S+     + Y+   +AG +R  L +++  E+ 
Sbjct: 117 DKPWIDFITKLIIGIKELSEGKLGITL-SLGEQKLEVYQQWFEAGAHRYLLRIETSNEEL 175

Query: 145 LRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            + L     +  + +  +HL +    ++   ++  LP QT+     ++       +D L 
Sbjct: 176 YKSLHPAAQSFEKRLKCLHLIKECGYQVGTGVMIGLPGQTIEDLANDILFFYDEDIDMLG 235

Query: 204 LYQLTIEKGTLFYKMHKDGDL 224
           +        T    +    + 
Sbjct: 236 MGPYIPHHNTPLKHLVDSFNP 256


>gi|328787511|ref|XP_393868.4| PREDICTED: CDK5RAP1-like protein-like [Apis mellifera]
          Length = 596

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 31/252 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------------LTGPRSISSIF 75
           C   C YC            +   I+S + E+Q +              +   R +S + 
Sbjct: 265 CDNMCTYC---IVPFTRGRERSRPIESIVKEIQSLSDDGVKEIVLLGQNVNSYRDMSQLK 321

Query: 76  FGGGTPSLI---------EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY 125
                 + +           +      D + +   ++  + I     +P        Q  
Sbjct: 322 LYTNMETHLAKGFKTVYKNKKGGRRFCDLLDEVSRINPEMRIRFTSPHPKDFPDEVLQLI 381

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPK 181
            +       I L  QS   + L  + R +     I  +H  R I P +  S D I     
Sbjct: 382 AERPNICKEIHLPAQSGNSRILEKMRRGYTREAYIDLVHHIRQIIPNIYLSSDFITGFCG 441

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +T  +++  L        +   L+  ++ + T  ++ ++  D V P+         +++ 
Sbjct: 442 ETEEEFQDTLSLIELIKYNKAFLFSYSMREKTTAHRRYQ--DDVPPNVKQNRLERMISKY 499

Query: 242 ITSAHGLHAYEI 253
            T A  L+  +I
Sbjct: 500 RTEAEKLNKLQI 511


>gi|313672441|ref|YP_004050552.1| SSU ribosomal protein s12p methylthiotransferase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939197|gb|ADR18389.1| SSU ribosomal protein S12P methylthiotransferase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 433

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 69/223 (30%), Gaps = 13/223 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-P 86
           C  +C YC            + N I      +    +      +  +       +     
Sbjct: 146 CNNRCSYC-------TIPFIRGNLISRPRESIIKEAEDLVKNGVKELIIISQDTTKYGID 198

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQ 143
           +  + +++ +     V    +I +   NP  V          +   +    + VQ ++++
Sbjct: 199 KGRSELIELLTDLVMVDGEFKIRLLYLNPDGVSNELVDFVSNQDKMIKYFEIPVQHIDDE 258

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R  ++ +  +     R+  P   +    I   P +    +E  ++    Y  D 
Sbjct: 259 ILKKMNRKSDSRKIKSVFEYIRSRIPEAFIRTTFIVGFPGEDDVSFEKMVEFVEEYKPDF 318

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              +  + E+GT  Y           S+ ++       ++   
Sbjct: 319 AGFFPYSREEGTKAYNFEGSCKSREISKRISRIQKIQKKNTLE 361


>gi|293372522|ref|ZP_06618904.1| adenosylmethionine-8-amino-7-oxononanoate transaminase [Bacteroides
           ovatus SD CMC 3f]
 gi|292632331|gb|EFF50927.1| adenosylmethionine-8-amino-7-oxononanoate transaminase [Bacteroides
           ovatus SD CMC 3f]
          Length = 804

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   Y+   E +      E     Q    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YQTKAEIYDLLPAEECLRQAQYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D +      SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVRYMRRHSS---IQLCASLGLLNEEELRSLHEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENEQP 308


>gi|237722965|ref|ZP_04553446.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. 2_2_4]
 gi|229447487|gb|EEO53278.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. 2_2_4]
          Length = 804

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   Y+   E +      E     Q    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YQTKAEIYDLLPAEECLRQAQYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D +      SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVRYMRRHSS---IQLCASLGLLNEEELRSLHEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENEQP 308


>gi|118580144|ref|YP_901394.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pelobacter
           propionicus DSM 2379]
 gi|229890588|sp|A1APR6|MIAB_PELPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|118502854|gb|ABK99336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelobacter propionicus
           DSM 2379]
          Length = 440

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 63/195 (32%), Gaps = 18/195 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC    +VR  +V +        ++    +      L G    S        PS
Sbjct: 158 CENYCSYC-IVPYVRGPEVSRRSGDILREVRQLADQGVREVALLGQNVNSYGLKSSAEPS 216

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  ++  +     +         ++P  +       +       +++ L  QS 
Sbjct: 217 F---AELIRLVAAVDGIRRIR-----FFTSHPKDMSPELIACFGDLPALCSQLHLPAQSG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  +GR +   E +  +   R + P + F  D+I   P +T  +++  L       
Sbjct: 269 SDNVLARMGRGYTREEYLEKVRALRAVRPDIVFTGDMIVGFPGETEEEFQETLSLMEEVR 328

Query: 199 VDHLSLYQLTIEKGT 213
              L  +  +   GT
Sbjct: 329 YIDLFSFAYSPRPGT 343


>gi|84624263|ref|YP_451635.1| hypothetical protein XOO_2606 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|123752741|sp|Q2P266|MIAB_XANOM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|84368203|dbj|BAE69361.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 484

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGTPS 82
           C  YC F      R +     F    +   Q   Q       L    +     +G     
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGD 249

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++ L++  IA+   +      T  ++P     +    YR      N + L VQ+ 
Sbjct: 250 AAQYADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|313681425|ref|YP_004059163.1| tRNA-i(6)a37 thiotransferase enzyme miab [Sulfuricurvum kujiense
           DSM 16994]
 gi|313154285|gb|ADR32963.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfuricurvum kujiense
           DSM 16994]
          Length = 433

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 71/208 (34%), Gaps = 16/208 (7%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--- 71
           S+    Y++    C K+C +C     V + +  + +     +          G + +   
Sbjct: 137 SSPYKAYINISIGCDKQCTFC----IVPKTRGDEISIPPDLIVAEVRKAVENGAKEVFLL 192

Query: 72  -SSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
             ++   G   S +  + N   +L  ++    +          +P  ++    + + +  
Sbjct: 193 GQNVNNYGRRFSDVNDKMNFTELLRRVSAVEGLERIRF--TSPHPFHMDDEFLEEFARNP 250

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS     L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 251 KICKSMHMPLQSGSTDILKAMKRGYTKEWFLNRARKLRELVPDVSISTDIIVAFPGESDA 310

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGT 213
            +E  L        + +  ++ +    T
Sbjct: 311 DFEDTLDVMKEVRFEQVFSFKYSPRPLT 338


>gi|298479874|ref|ZP_06998074.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
 gi|298274264|gb|EFI15825.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
          Length = 439

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|294809243|ref|ZP_06767959.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
 gi|294443637|gb|EFG12388.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 418

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|293368846|ref|ZP_06615450.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292636151|gb|EFF54639.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 439

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|237720003|ref|ZP_04550484.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450555|gb|EEO56346.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 439

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|237714843|ref|ZP_04545324.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406886|ref|ZP_06083435.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
 gi|294647146|ref|ZP_06724745.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
 gi|229445168|gb|EEO50959.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355589|gb|EEZ04680.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
 gi|292637433|gb|EFF55852.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
          Length = 439

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|237746858|ref|ZP_04577338.1| radical SAM family protein [Oxalobacter formigenes HOxBLS]
 gi|229378209|gb|EEO28300.1| radical SAM family protein [Oxalobacter formigenes HOxBLS]
          Length = 298

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 75/217 (34%), Gaps = 10/217 (4%)

Query: 31  KCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           KC YCD  +   +R+ V  E  ++    E++W  +         +  G      +  + +
Sbjct: 34  KCTYCDMYTQPQKRFSVKPEEDVK---KEIEWFSRHYDGIQRVFLADGDVV--ALSTRRL 88

Query: 90  ALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             IL+ I +    V+         N ++      +    AG+ ++ +G +S ++  L  +
Sbjct: 89  LNILNTIREYLPEVTRVASYCSPRNVANKSDEELKTLFDAGLKQVYVGAESGDDFVLESI 148

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQ 206
            +       + A++   +   + S  +I  +     +          A     + L+   
Sbjct: 149 NKGETHQSTVEALNRLGDAGIKRSVMIINGVGGTKFSEQHALNSALLANETQPEFLATLV 208

Query: 207 LTIEKG-TLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           L +  G   F + +    + +       ++     ++
Sbjct: 209 LNLPNGEARFQQGYNGQFIKMTQHERFREIRQFVGAL 245


>gi|148380361|ref|YP_001254902.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932059|ref|YP_001384581.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
 gi|153935820|ref|YP_001388097.1| RNA modification protein [Clostridium botulinum A str. Hall]
 gi|238065360|sp|A7FVY1|RIMO_CLOB1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|238065364|sp|A5I4I1|RIMO_CLOBH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|148289845|emb|CAL83953.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152928103|gb|ABS33603.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931734|gb|ABS37233.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           Hall]
          Length = 445

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +Y+  ++   ++ L E++ + +      +  I       ++    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRKK---ENILKEVENLAKQG----VKEIILIAQDTTMYGID 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 209 IYGKKVLHELLRDISKVEGVKWIR--LLYCYPEEITKELIEEIKNNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIINIIKKLRKEIEGITLRTSLIVGFPGETEGEFSELKEFVSDVK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT      +   +       E + +   ++++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREEEIMILQQSISKDINKEKIGKTYEV 384


>gi|57233882|ref|YP_182095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dehalococcoides
           ethenogenes 195]
 gi|123618318|sp|Q3Z6Q4|MIAB_DEHE1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|57224330|gb|AAW39387.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dehalococcoides
           ethenogenes 195]
          Length = 418

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 20/200 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSI-----FFGGGTP 81
           C   C YC       R    +   I        + +R+  G R +  +      +G   P
Sbjct: 134 CDNFCTYC---IVPYRRGREKSRSISELCCEAAELVRR--GSREVVLLGQNVDSYGHDLP 188

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
              E   +A +L  ++    +       + ++P  +               + +SL VQ+
Sbjct: 189 ---EKPCLADLLYALSDIPGLLRIRF--LTSHPKDISQKLIDAMASLHKVCHSLSLPVQA 243

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             +  L  + R + + +    +   +   P +S   DLI   P +T  Q++   +     
Sbjct: 244 GADTILAAMRRGYTSEQYRELVGRLKTAMPDISLQTDLIVGFPSETAEQFDQSYKLMSDI 303

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             D + +   +    T   +
Sbjct: 304 GYDAIHVAAYSPRPQTAAAR 323


>gi|323703297|ref|ZP_08114948.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323531762|gb|EGB21650.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 235

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 66/196 (33%), Gaps = 10/196 (5%)

Query: 28  CVKK-CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C YC+    V      +   ++    +++  R+    R+       G    +++ 
Sbjct: 25  CAHNNCTYCNMYKDVS----FRIESLEQIEEDLKEAREYIK-RAERIFLLNGDAF-VLKA 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  I   I + +   + + +     N  S      +  R  G+N + +G++S  ++ L
Sbjct: 79  DYLKAIAVKIREYFPECNTITMYASIQNIKSKTDKELEELRVLGINDLYVGIESGCDEVL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLS 203
             + + H   EA   +             L+  +    + +   +   +         + 
Sbjct: 139 AHIQKGHTVKEATEQLQRLNEANINHIALLMLGVAGKGKGIENAKATAEFLNVTKPKIVW 198

Query: 204 LYQLTIEKGTLFYKMH 219
           +  L + +GT  Y+  
Sbjct: 199 VGTLGVFEGTKLYEEV 214


>gi|254882029|ref|ZP_05254739.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640963|ref|ZP_07995671.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
 gi|254834822|gb|EET15131.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317387408|gb|EFV68279.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
          Length = 432

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C +KC YC       R+     E  I         + +      I    + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRHISRPMEEIIDEVKL---LVSEGVKEFQIIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ IA    V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KSQKLPELIERIANVPGVEWIRLHY--AYPAHFPEELFRVMREHDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R+ + +E    I           +   L+   P +T   +E   +       D
Sbjct: 259 NMLNKMRRHVSKAETYELIEKFRREVPGIHLRTTLMVGHPGETEEDFEELKEFVKKVRFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +  + E+GT   K ++D       +    +L  L Q I
Sbjct: 319 RMGAFAYSEEEGTFAAKEYEDSISHEVKQQRLDELMALQQEI 360


>gi|167765850|ref|ZP_02437903.1| hypothetical protein CLOSS21_00341 [Clostridium sp. SS2/1]
 gi|167712567|gb|EDS23146.1| hypothetical protein CLOSS21_00341 [Clostridium sp. SS2/1]
 gi|291559203|emb|CBL38003.1| iron-only hydrogenase maturation protein HydE [butyrate-producing
           bacterium SSC/2]
          Length = 347

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +  RY++ +E  + +     Q      G RS   +  GG  P  
Sbjct: 63  YCKNNCYYCGIQGSNPNANRYRLSKEEILSACENGYQL-----GYRSF--VLQGGEDP-H 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I K +      +  I  +       ++Q    AG +R  L  ++ + +
Sbjct: 115 YTDEVMVPIVAEIRKRYP-----DCAITLSLGERSKESYQKLYDAGADRYLLRHEAADPE 169

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + L     +    I  +   + I   +    +   P QT+     +L          +
Sbjct: 170 LYQKLHPESLSLENRIQCLWNLKEIGYAVGTGFMVGAPYQTVENLADDLLFIKELDPQMV 229

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F +  
Sbjct: 230 GIGPFVPHHDTRFKEFP 246


>gi|319948419|ref|ZP_08022558.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Dietzia
           cinnamea P4]
 gi|319437923|gb|EFV92904.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Dietzia
           cinnamea P4]
          Length = 522

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 22/205 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGT-- 80
           C   C +C             +      L EMQ +    G   ++ +      +G     
Sbjct: 178 CNNTCTFC---IVPSLRGKEVDRRPGEVLAEMQALAD-EGVLEVTLLGQNVNAYGRSFHD 233

Query: 81  ---PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
              PS  +    A +L    +   +          +P+    +  +          ++ +
Sbjct: 234 PDEPS--DKGAFAKLLRAAGRIEGIERIRF--TSPHPAEFTDDVIEAMASTPTVCPQLHM 289

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ LR + R++ +   +  I   R   P   ++ D+I   P +T   ++  L  
Sbjct: 290 PLQSGSDRVLRAMRRSYRSERFLGIIDRVRAAMPHAAITTDIIVGFPGETEEDFQATLDV 349

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
                      +Q +   GT    M
Sbjct: 350 VEKARFSSAFTFQYSPRPGTPAATM 374


>gi|315502601|ref|YP_004081488.1| RNA modification enzyme, miab family [Micromonospora sp. L5]
 gi|315409220|gb|ADU07337.1| RNA modification enzyme, MiaB family [Micromonospora sp. L5]
          Length = 499

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 16/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C     V   +  +++  +     +  +R L     +     G    S  +E 
Sbjct: 164 CNNTCTFC----IVPSLRGKEKD--RRPGDILSEVRALVDSGVLEVTLLGQNVNSYGVEF 217

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +       +     +     +     +P     +      +     + + + +QS  + 
Sbjct: 218 GDRYAFGKLLRACGDIDGLERVRFTSPHPKDFTDDVIAAMAETPNVCHSLHMPLQSGSDD 277

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R++ +   +  I    A      ++ D+I   P +T   +   L          
Sbjct: 278 VLRAMRRSYRSERYLGIIEKVRAAMPDAAITTDIIVGFPGETEADFARTLDVVREARFSS 337

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +Q +   GT    M    D  LP + V      L   +     
Sbjct: 338 AFTFQYSKRPGTPAATM----DGQLPKQVVQERYERLIACVEEITW 379


>gi|302866042|ref|YP_003834679.1| RNA modification enzyme, MiaB family [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568901|gb|ADL45103.1| RNA modification enzyme, MiaB family [Micromonospora aurantiaca
           ATCC 27029]
          Length = 499

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 67/226 (29%), Gaps = 16/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C     V   +  +++  +     +  +R L     +     G    S  +E 
Sbjct: 164 CNNTCTFC----IVPSLRGKEKD--RRPGDILSEVRALVDSGVLEVTLLGQNVNSYGVEF 217

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +       +     +     +     +P     +      +     + + + +QS  + 
Sbjct: 218 GDRYAFGKLLRACGDIDGLERVRFTSPHPKDFTDDVIAAMAETPNVCHSLHMPLQSGSDD 277

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R++ +   +  I    A      ++ D+I   P +T   +   L          
Sbjct: 278 VLRAMRRSYRSERYLGIIEKVRAAMPDAAITTDIIVGFPGETEADFARTLDVVREARFSS 337

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
              +Q +   GT    M    D  LP + V      L   +     
Sbjct: 338 AFTFQYSKRPGTPAATM----DGQLPKQVVQERYERLIACVEEITW 379


>gi|223040541|ref|ZP_03610813.1| biotin synthase [Campylobacter rectus RM3267]
 gi|222878176|gb|EEF13285.1| biotin synthase [Campylobacter rectus RM3267]
          Length = 350

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C K+C YC     N  ++RYK+  E  +           +        ++    G     
Sbjct: 62  CAKECFYCGLRSKNKDIKRYKMSAEEIVS--------RAKEAAMSGYKTVVMQSGESGAF 113

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +   I  I+  I K        ++ I  +        ++ Y+KAG +R  L +++ +   
Sbjct: 114 KDDEICEIIREIKKF-------DVQITLSFGEKSFEQYRAYKKAGADRYLLRIETADRAL 166

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + L  N +    I  +   RN+       L+  LP  +      +L     Y  D + +
Sbjct: 167 YKALHPNMSLKNRIKCLENLRNLGYETGSGLLVGLPGSSAKILARDLMFLKKYDFDMIGI 226

Query: 205 YQLTIEKGTLF 215
                   T  
Sbjct: 227 GPFIPATNTPL 237


>gi|239618117|ref|YP_002941439.1| Radical SAM domain protein [Kosmotoga olearia TBF 19.5.1]
 gi|239506948|gb|ACR80435.1| Radical SAM domain protein [Kosmotoga olearia TBF 19.5.1]
          Length = 450

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 70/194 (36%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC        +K+ +    +S    ++ +  L     +S + F      ++  Q
Sbjct: 215 CPFRCSYC------TSWKLWERFNQKSPEKTLEEIEHLNAMYGLSDVVFFDDA--ILIGQ 266

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +L  I +    +    +    +   V+       ++     I LG ++  ++    
Sbjct: 267 NFKTLLKMIKER-GFNLRFHLPNGIHARLVDEELAVLMKETNFKTIKLGYETANDELQLK 325

Query: 148 LGRNHNASEAIAAIHLARNIFP---RMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLS 203
            G   +  E I A+++ +        +S  +I  LP QT    E  +        + +++
Sbjct: 326 TGGKVSNEEFIKAVNILKAAGFTAKELSAYIIANLPGQTFEDVERAINHCEELGVIPNIN 385

Query: 204 LYQLTIEKGTLFYK 217
            Y  T   GT  ++
Sbjct: 386 EY--TPIPGTPEWR 397


>gi|253699420|ref|YP_003020609.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter sp.
           M21]
 gi|251774270|gb|ACT16851.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter sp. M21]
          Length = 441

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 18/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          V      +S +  ++ +R L G         G    S    Q
Sbjct: 159 CDNFCAYC------IVPHVRGREISRSAVKVVEEVRALAGGGVTEVTLLGQNVNSYCSKQ 212

Query: 88  ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               +   +L  +A+   +      T  ++P  +     + +         I L  QS  
Sbjct: 213 PGEPDFPDLLRLVAQVDGIERIRFTT--SHPKDMSPRLIECFADLPKLAPHIHLPAQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R + A + +A +   +   P + F  D+I   P +    ++  +        
Sbjct: 271 DRVLERMNRGYTAQQYLAKVAALKEACPAIQFTGDMIVGFPGEDEAAFQETMALMEEVRY 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L  +  +   GT   +     D     +   ++     Q  T+     + E
Sbjct: 331 ADLFSFIYSARPGTKAAE--YADDATRAEKQGRLERLQAAQKKTTLARNRSLE 381


>gi|170289053|ref|YP_001739291.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|170176556|gb|ACB09608.1| Radical SAM domain protein [Thermotoga sp. RQ2]
          Length = 551

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 38/221 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIFFG----G 78
           C ++  +C F +    +   +   +Q+ L E++ +     R     R+ + + FG    G
Sbjct: 184 CERR-TFCSFCTEPLLHGRLKSRDVQAILKEIESLYRAGCRAFRFGRAANILAFGSDRNG 242

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV---------EVNNFQGYRKAG 129
           G PS   P+ +  +  G  +       +     ANPS +          V     Y   G
Sbjct: 243 GKPS---PEILEELYSGTREVAPHLEVLHTD-NANPSYLVTYEKECRKIVETIVRYNTPG 298

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM---------SFDLIYALP 180
            +  S GV+S +E  L+      +  E + AI +   I               +LI+ LP
Sbjct: 299 -DVFSFGVESFDENVLKKNNVQGSPEEFLKAIAVVNEIGGVRVDGIPKLLPGVNLIFGLP 357

Query: 181 KQTMTQWEMELQRALSYAVD-----HLSLYQLTIEKGTLFY 216
            +T    +           +      +++ +L    GT  Y
Sbjct: 358 GETEETLKKNYSYLKRILDEGYLLRRINIRKLLAYPGTPVY 398


>gi|289422519|ref|ZP_06424362.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
 gi|289157091|gb|EFD05713.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
          Length = 299

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 78/221 (35%), Gaps = 16/221 (7%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C    +       +   +     ++    Q    R +  +F   G P +++ 
Sbjct: 25  CTHNKCKFCGMYRYTN----FKMESLDQIEEDVIEASQHPYYRGVKRVFLLNGNPFVLKT 80

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +  I D I K+      + +     +  +      +  + AG+N + LG++S  +++L
Sbjct: 81  ERLLKIADIIHKHLPQVEVICMYSSIKDIENKSDQELKMLKDAGINDLYLGIESGNQEAL 140

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME--LQRALSYAVDHLS 203
            F+ + +   EAI  +             ++  L  + + +      L   +   V+   
Sbjct: 141 EFINKGNTVEEAITQMKRLDKFDYNYYAMILTGLMGRGVDKAIENGRLTGLMLSQVNTRG 200

Query: 204 LYQL--TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++ +  T+  GT         DL    E      Y+    +
Sbjct: 201 IFPMSVTLVPGTEL------WDLNRRGEYEEATEYDRLIEL 235


>gi|288942386|ref|YP_003444626.1| MiaB family RNA modification enzyme [Allochromatium vinosum DSM
           180]
 gi|288897758|gb|ADC63594.1| RNA modification enzyme, MiaB family [Allochromatium vinosum DSM
           180]
          Length = 441

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 57/192 (29%), Gaps = 8/192 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       R +     F            Q     ++           L+   
Sbjct: 157 CSKYCTYC--VVPYTRGEEISRPFDDVIAEVADLAEQGVREINLLGQNVNAYR-GLMADG 213

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           + A +   I     V     I     +P     +  + + +     + + L VQS  ++ 
Sbjct: 214 STASLALLIRYVAAVEGIGRIRFTTSHPVEFGDDLIETFAEVPELASFVHLPVQSGSDRI 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H A E    I   R   P +    D I   P +T   ++  +        DH 
Sbjct: 274 LAAMKRGHTALEYRCKIKRLREARPDICISSDFIVGFPNETDADFDATIDLIDQVGFDHS 333

Query: 203 SLYQLTIEKGTL 214
             +  +   GT 
Sbjct: 334 FSFVYSRRPGTP 345


>gi|166711743|ref|ZP_02242950.1| hypothetical protein Xoryp_09860 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 484

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGTPS 82
           C  YC F      R +     F    +   Q   Q       L    +     +G     
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGD 249

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++ L++  IA+   +      T  ++P     +    YR      N + L VQ+ 
Sbjct: 250 AAQYADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|150005789|ref|YP_001300533.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
 gi|238065291|sp|A6L5E7|RIMO_BACV8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|149934213|gb|ABR40911.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
          Length = 432

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C +KC YC       R+     E  I         + +      I    + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRHISRPMEEIIDEVKL---LVSEGVKEFQIIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ IA    V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KSQKLPELIERIANVPGVEWIRLHY--AYPAHFPEELFRVMREHDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R+ + +E    I           +   L+   P +T   +E   +       D
Sbjct: 259 NMLNKMRRHVSKAETYELIEKFRREVPGIHLRTTLMVGHPGETEEDFEELKEFVKKVRFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +  + E+GT   K ++D       +    +L  L Q I
Sbjct: 319 RMGAFAYSEEEGTFAAKEYEDSISHEVKQQRLDELMALQQEI 360


>gi|227499453|ref|ZP_03929564.1| tRNA 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC
           35098]
 gi|227218515|gb|EEI83758.1| tRNA 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC
           35098]
          Length = 448

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 16/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     V   +  +E+   S  + +  +  L           G    S     
Sbjct: 168 CDNFCSYC----IVPESRGREESRRPS--SILDEVENLVSRGYKEITLLGQNVNSYGNRA 221

Query: 88  NI----ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +       +L+ I+    +      T  ++P  +        +      N   L +QS  
Sbjct: 222 DFDMTFPALLEKISHIEGLKRLRFTT--SHPKDLSDELIDVIKNNDNICNYFHLPLQSGS 279

Query: 142 EQSLRFLGRNHNASEAIA-AIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R ++  + +  A+ L   I    +S D+I   P +T   ++  L+       
Sbjct: 280 SKVLKDMNRKYDQEKYLERALKLREEIPSIAISTDIIVGYPTETEEDFQETLKVCEKVKY 339

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
           D    ++ +    T   K+    D
Sbjct: 340 DSAYTFKFSPRPKTRAAKLKTIDD 363


>gi|218133712|ref|ZP_03462516.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991087|gb|EEC57093.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
           43243]
          Length = 447

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 63/192 (32%), Gaps = 10/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI-EP 86
           C K C YC      +     +   +   + + + + +      I          + +   
Sbjct: 156 CDKCCTYC---IIPKVRGSYRSVPMDELIKQAEDLAEQGVKELILVAQETSLYGTDLYGE 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +++  +L  +A    +       +   P  ++    Q  +      + + L +Q   +  
Sbjct: 213 KSLHRLLHELAAIDGIEWIR--ILYCYPEEIDDTLIQAIKSEPKVCHYLDLPIQHANDAI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR     + I  +   R+  P +     LI   P +T  Q E  L        D L
Sbjct: 271 LKRMGRRTTKQDLIDIVKKLRSEIPDICLRTTLITGFPGETKEQHEEVLDFIDELEFDRL 330

Query: 203 SLYQLTIEKGTL 214
             +  + E+ T 
Sbjct: 331 GAFTYSAEEDTP 342


>gi|159037038|ref|YP_001536291.1| RNA modification protein [Salinispora arenicola CNS-205]
 gi|229890640|sp|A8M7W6|MIAB_SALAI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157915873|gb|ABV97300.1| RNA modification enzyme, MiaB family [Salinispora arenicola
           CNS-205]
          Length = 502

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C     V   +  + +  +     +  +R L     +     G    S  IE 
Sbjct: 166 CNNTCTFC----IVPALRGKERD--RRPGDVLSEVRALVDEGVLEVTLLGQNVNSYGIEF 219

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +       +     +     +     +P     +      +     + + + +QS  + 
Sbjct: 220 GDRYAFGKLLRACGDIDGLERVRFTSPHPKDFTDDVIAAMAETPNVCHSLHMPLQSGSDD 279

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R++ +   +  I    A      ++ D+I   P +T   +E  L    S     
Sbjct: 280 VLRAMRRSYRSERYLGIIEKVRAAMPDAAITTDIIVGFPGETEADFERTLDVVRSARFSS 339

Query: 202 LSLYQLTIEKGTLFYKM 218
              +Q +   GT    M
Sbjct: 340 AFTFQYSKRPGTPAATM 356


>gi|57168594|ref|ZP_00367727.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter coli
           RM2228]
 gi|57020099|gb|EAL56776.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter coli
           RM2228]
          Length = 419

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     +  +  G E  I   +   +  + +        +      
Sbjct: 130 YINISIGCDKHCTYC-----IVPHTRGDEISIPLNIIYKEAQKAVDKGAKEIFLLGQ--- 181

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + + K  
Sbjct: 182 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEGLERIRFTSPHPLHMDDKFLEVFAKNP 237

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   Q L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 238 KVCKSMHMPLQSGSSQILKAMKRGYTKEWYLDRALKLRELCPNVSISTDIIVAFPGESDK 297

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  ++       + +  ++ +    T    M    D
Sbjct: 298 DFEETMEVLEKVRFEQMFSFKYSKRPLTKAATMPNQID 335


>gi|146297300|ref|YP_001181071.1| radical SAM domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410876|gb|ABP67880.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 536

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 18/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC          + +     S     + +      + +  I F   T +    +
Sbjct: 164 CPFRCTYC-------LSSIEKSVRFASLEKVFEEL-DYLFKKQVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S   +I  E +P+ ++ +       +  N  R+ +G+QS   Q+L
Sbjct: 215 RAIKIIEFCKQK---SQATQIHFEIDPTLLDSDIITAINTSKDNLFRLEIGLQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R ++  +    +         +   DLI  LP +    ++  L + + Y  D + L
Sbjct: 272 DAIDRFYDIDKIDKNLKELMENKKAIVHLDLIAGLPYEDFLSFKRSLDKTILYFADEVQL 331

Query: 205 YQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITS 244
             L + KGT        +       P   V  + +   + I  
Sbjct: 332 GFLKMLKGTKIREEAAKYNYEFFKDPPYEVISNSFISFEEIYE 374


>gi|307729782|ref|YP_003907006.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. CCGE1003]
 gi|307584317|gb|ADN57715.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia sp. CCGE1003]
          Length = 473

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C +   V  ++  +   +++ L E++W+R       +  I F   T +  +P 
Sbjct: 206 CRSRCTFCLWPQTVGGHR-YRTRSVENVLEEVKWIRDNMP--EVKEIMFDDDTFTDFKP- 261

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               + +       +        +AN         +  ++ G+  + +G +S ++Q L  
Sbjct: 262 ---RVEEIARGLGRLGVTWSCNAKANVPYGT---LKIMKENGLRLLLVGYESGDDQILLN 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +      A       R +  ++    I  LP +T    +  ++ A       + +   
Sbjct: 316 IKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETQQTIQKTIEYAKEINPHTIQVSLA 375

Query: 208 TIEKGTLFYKM 218
               GT  Y  
Sbjct: 376 APYPGTRLYDQ 386


>gi|120603130|ref|YP_967530.1| RNA modification protein [Desulfovibrio vulgaris DP4]
 gi|120563359|gb|ABM29103.1| RNA modification enzyme, MiaB family [Desulfovibrio vulgaris DP4]
          Length = 458

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 70/235 (29%), Gaps = 34/235 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC            +       + E++ +    G R +          S +  +
Sbjct: 173 CSHRCTYC---IVPLTRGASRSREPGEVVAELRRLLD-AGFREVML--------SGVNLR 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ------------GYRKAGVNRI-- 133
                L G    W +   VE   E  P        +                 G +R+  
Sbjct: 221 LYGRDLSGAGDFWDLLQRVER--ELAPEWAGRARLRISSLEPGQLGAHALDVLGGSRLVC 278

Query: 134 ---SLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
               L +QS     LR +GR H + +  +  +      +P      D++   P ++   +
Sbjct: 279 PQLHLSLQSGSPDVLRRMGRGHYSPAPLLDFLRDLGGTWPVFGLGADILMGFPGESEDAF 338

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              L  A +  + +  ++  +   GT+   + +     +     A     + Q  
Sbjct: 339 AETLDFARALPLTYAHVFPYSRRPGTVAASLPEHLPQEIRKARAAAVRDVVAQKR 393


>gi|225378030|ref|ZP_03755251.1| hypothetical protein ROSEINA2194_03690 [Roseburia inulinivorans DSM
           16841]
 gi|225210031|gb|EEG92385.1| hypothetical protein ROSEINA2194_03690 [Roseburia inulinivorans DSM
           16841]
          Length = 441

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 25/226 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K+C YC       ++ S      +GQ    + +   E+  + Q T    I        
Sbjct: 154 CNKRCTYCIIPYIRGNYRSVPMEDLIGQAKELVANGAKELILVAQETTLYGID------- 206

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L   +++  +LD + K   +       +   P  +  +      +     + + + +
Sbjct: 207 ---LYGEKSLHKLLDELNKINGLFWIR--IMYCYPEEIYEDLIDSMIRNEKVCHYLDIPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  L+ +GR  +  + +  I   R   P ++    LI   P +T    E  +Q   
Sbjct: 262 QHSNDTMLKRMGRRTSHDDLVRIITHLRERIPDITLRTTLICGFPGETQEIHEELMQFIN 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
               D L  +  + E+GT         D  L  ++   D+  L + 
Sbjct: 322 DMEFDRLGAFTYSPEEGTPAAAFEDQVDEEL-KKDWQADVMELQEE 366


>gi|170754856|ref|YP_001781949.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
 gi|238065365|sp|B1II37|RIMO_CLOBK RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|169120068|gb|ACA43904.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
           Okra]
          Length = 445

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 21/238 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +Y+  ++   ++ L E++ + +      +  I       ++    
Sbjct: 156 CNNFCTYCAIPRIRGKYRSRKK---ENILKEVENLAKQG----VKEIILIAQDTTMYGID 208

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   V       +   P  +     +  +        + L +Q +
Sbjct: 209 IYGKKVLHELLRDISKVEGVKWIR--LLYCYPEEITKELIEEIKNNDKVCKYLDLPIQQI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR       I  I   R     ++    LI   P +T  ++    +      
Sbjct: 267 SNSVLKRMGRKTTKETIINIIKKLRKEIEGITLRTSLIVGFPGETEGEFSELKEFVSDVK 326

Query: 199 VDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           +D L +++ + E+GT      +   +       E + +   ++++ I        YE+
Sbjct: 327 LDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREEEIMILQQSISKDINKEKIGKIYEV 384


>gi|255656208|ref|ZP_05401617.1| radical SAM superfamily lipoprotein [Clostridium difficile
           QCD-23m63]
 gi|296450356|ref|ZP_06892114.1| radical SAM domain protein [Clostridium difficile NAP08]
 gi|296878768|ref|ZP_06902770.1| radical SAM domain protein [Clostridium difficile NAP07]
 gi|296260806|gb|EFH07643.1| radical SAM domain protein [Clostridium difficile NAP08]
 gi|296430236|gb|EFH16081.1| radical SAM domain protein [Clostridium difficile NAP07]
          Length = 289

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 90/248 (36%), Gaps = 24/248 (9%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + K  +   ++    E+   R+    + +  IF   G   +I  
Sbjct: 25  CSHNKCTFCS----MYKSKKFKIKPLEVIKNEIDIFRRYY--KHVERIFLADGDALIIPM 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  I+  +           IT+  +P S+E    +     RK GV  I LG++S   +
Sbjct: 79  EKLRDII--LYIKEVFPECERITMYGSPKSIEKKSDDELIELRKLGVKMIYLGLESGSNE 136

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +  N+ + I      +    ++S  +I  L    +T        +     + D+
Sbjct: 137 VLEDIKKGFNSEQLIKVGRKVKKSGIKLSATVIAGLGGTKKTHQHAVDTGKMLGKISPDY 196

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           + +  L +E  T  Y      DL+   E   ++   + Q I          I  +  +  
Sbjct: 197 VGVLSLMVEPNTELY------DLLKAGEFTILEDKAVLQEIKEMIKN----IDANEKIVF 246

Query: 262 ESLHNLNY 269
            S H  NY
Sbjct: 247 RSNHASNY 254


>gi|253700272|ref|YP_003021461.1| radical SAM protein [Geobacter sp. M21]
 gi|251775122|gb|ACT17703.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 450

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 61/201 (30%), Gaps = 7/201 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F S   +   G+    QS    +  +R L     +  I+F     +L    N A
Sbjct: 187 CPFSCTFCSV--KSVWGKSYRYQSAGRVLAEIRHLIEVYGVEGIYFREDHFTL----NKA 240

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
            +L+      +         E    +++  +      +G   + LGV+S  ++ L  LG+
Sbjct: 241 RLLEFCRGVVSSGLQFVWACETRVDALDEESITLMASSGCKAVYLGVESGSQRMLDRLGK 300

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
                E    + L +          +  +P +T                   +       
Sbjct: 301 GIQLVEVERVLMLLKKHGIVSYCSFVAGIPGETFLDLLRTKALIRRTQPGAHAFAVYVGI 360

Query: 211 KGTLFYKMHKDGDLVLPSENV 231
            G+  Y+            + 
Sbjct: 361 PGSELYREMLISGNYEHMSDN 381


>gi|218779020|ref|YP_002430338.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760404|gb|ACL02870.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 497

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 69/219 (31%), Gaps = 10/219 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC +++        +    +  L  M W R       +  +             
Sbjct: 198 CAHHCRYC-YHTGQSGNHRFRAMNAEKTLERMFWARDSMNLDGVYLVDDNFFLNRNRSAA 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A + +   + +     V++         +    Q   K+G+ R+S+G +S   + L +
Sbjct: 257 VVAALKNQSRQFYWQIQGVDVPSMLR---FDQAGLQDLEKSGLQRVSVGAESGSPKILNY 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH-----L 202
           + + H     + A  L       + +  +  LP +T+   +  ++       D+      
Sbjct: 314 VNKPHTVPMLLKANKLWSGFSIYIFYSWLSGLPGETLADLKKTVKVMFRIMEDNPNARLS 373

Query: 203 SLYQLTIEKGTLFYKMHKDGD-LVLPSENVAVDLYNLTQ 240
            +Y      GT  +    D      P        Y+ + 
Sbjct: 374 PIYNFLPFPGTSMWDEVTDNYGFKPPESLQEWGNYDWSH 412


>gi|32475869|ref|NP_868863.1| MiaB protein- tRNA-thiotransferase [Rhodopirellula baltica SH 1]
 gi|81659862|sp|Q7ULM9|MIAB_RHOBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|32446412|emb|CAD76240.1| probable MiaB protein-putative tRNA-thiotransferase [Rhodopirellula
           baltica SH 1]
          Length = 479

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C K C YC     V   +  ++   +S    +   R L    ++     G    S     
Sbjct: 172 CDKFCTYC----VVPNTRGPEQG--RSPEEIVSEARVLAEQGALEITLLGQTVNSYRHRG 225

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           P     +   + +   +     I    N P  +     +  R        + +  QS  +
Sbjct: 226 PDGETDMAGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRDLPKVSPYLHVPAQSGSD 285

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +  ++ +        + P   +S D I     +T   ++  ++        
Sbjct: 286 AVLKRMKRGYTIADYMEMFERIETVLPEASVSSDFIVGFCGETDEDFQKSVKLIERCRFK 345

Query: 201 HLSLYQLTIEKGT 213
           +  ++Q ++ +GT
Sbjct: 346 NSFIFQYSVREGT 358


>gi|296081133|emb|CBI18159.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 67/204 (32%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++ +    T +    +     S  +  +G      + 
Sbjct: 125 CLGACTYCK-TKHARGHLGSYTVDSLVGRVRTVIADGVKEIWLSSEDTGAYGRDIGVTLP 183

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAGV--------NRISLG 136
                 +L+ I           + I   NP  +     +  ++  V        + + + 
Sbjct: 184 I-----LLNAIVSELPPDGGTMLRIGMTNPPYI----LEHLKEMAVVLRHPCVYSFLHVP 234

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQS  +  L  + R +  +E    +     +    +++ D+I   P +T  ++   +   
Sbjct: 235 VQSGSDAILSAMNREYTVTEFRTVVDTLTELVPGMQIATDIICGFPGETDEEFAQTVSLI 294

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
             Y    + + Q     GT   +M
Sbjct: 295 QEYRFPQVHISQFYPRPGTPAARM 318


>gi|262384855|ref|ZP_06077987.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
 gi|262293571|gb|EEY81507.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
          Length = 444

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + + +    G + I       G       +
Sbjct: 160 CDYYCSYC---TIPFARGRSRNGTIASMVEQAREVAS-KGGKEIVLTGVNIGDFGKSTDE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F  + K       + +QS  +  L+ 
Sbjct: 216 TFIDLIRALDEVEGIVRYRISSIEPNLITDEAIDFVAHSKRFAPHFHIPLQSGSDAVLQL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I   + + P   +  D+I     +T   +E   Q   S  +  L ++
Sbjct: 276 MRRRYDTALFRHKIEKIKEVMPHAFIGVDVIVGTRGETDEYFEEARQFIDSLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|301162600|emb|CBW22147.1| putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis 638R]
          Length = 748

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIE 85
           C + C +C  +SH   YK   + + + S    ++  +       +  S+   G  PS   
Sbjct: 62  CPENCKWCAQSSH---YKTKADVYDLVSAEECLRQAKYNEAQGVNRFSLVTSGRKPS--- 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+N+  +     +    SS   I + A+   ++    Q    AGV R    +++      
Sbjct: 116 PKNMKELCVAARRMRRHSS---IRLCASLGLLDEEELQALYDAGVTRYHCNLET-APSHF 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +  +H AR +   +    I  +  +T+ Q            +  + + 
Sbjct: 172 DSLCTTHTQEQKLKTLHAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRDLNIQSIPIN 230

Query: 206 QLTIEKGTLFYKM 218
            L    GT     
Sbjct: 231 LLQPIPGTPLEHQ 243


>gi|265762993|ref|ZP_06091561.1| putrescine aminotransferase [Bacteroides sp. 2_1_16]
 gi|263255601|gb|EEZ26947.1| putrescine aminotransferase [Bacteroides sp. 2_1_16]
          Length = 748

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIE 85
           C + C +C  +SH   YK   + + + S    ++  +       +  S+   G  PS   
Sbjct: 62  CPENCKWCAQSSH---YKTKADVYDLVSAEECLRQAKYNEAQGVNRFSLVTSGRKPS--- 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+N+  +     +    SS   I + A+   ++    Q    AGV R    +++      
Sbjct: 116 PKNMKELCVAARRMRRHSS---IRLCASLGLLDEEELQALYDAGVTRYHCNLET-APSHF 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +  +H AR +   +    I  +  +T+ Q            +  + + 
Sbjct: 172 DSLCTTHTQEQKLKTLHAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRDLNIQSIPIN 230

Query: 206 QLTIEKGTLFYKM 218
            L    GT     
Sbjct: 231 LLQPIPGTPLEHQ 243


>gi|253563121|ref|ZP_04840578.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. 3_2_5]
 gi|251946897|gb|EES87179.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. 3_2_5]
          Length = 748

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIE 85
           C + C +C  +SH   YK   + + + S    ++  +       +  S+   G  PS   
Sbjct: 62  CPENCKWCAQSSH---YKTKADVYDLVSAEECLRQAKYNEAQGVNRFSLVTSGRKPS--- 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+N+  +     +    SS   I + A+   ++    Q    AGV R    +++      
Sbjct: 116 PKNMKELCVAARRMRRHSS---IRLCASLGLLDEEELQALYDAGVTRYHCNLET-APSHF 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +  +H AR +   +    I  +  +T+ Q            +  + + 
Sbjct: 172 DSLCTTHTQEQKLKTLHAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRDLNIQSIPIN 230

Query: 206 QLTIEKGTLFYKM 218
            L    GT     
Sbjct: 231 LLQPIPGTPLEHQ 243


>gi|291286754|ref|YP_003503570.1| MiaB-like tRNA modifying enzyme [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883914|gb|ADD67614.1| MiaB-like tRNA modifying enzyme [Denitrovibrio acetiphilus DSM
           12809]
          Length = 439

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC          +      ++ + E++ + +      +   I  G     L E 
Sbjct: 145 CDSNCAYC---IIPSLRGLPVSRASEAVIAEVKTLVKAGYKEIVPVGIHVGKYGQDLKEE 201

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQ 143
            ++  +++ I            +IE N   +     Q   +          + +QS    
Sbjct: 202 IDLPHLIEKIIAIEGDFRVRLTSIELN--ELTDRMIQMLAENTEKICRHYHIPLQSGSSH 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L  + R + A E I  ++  + +     +  D+I   P +T   +   L       ++H
Sbjct: 260 TLSMMNRKYTAEEYITKLNRLKELVPGCLLGADVIVGFPGETDDHFAETLDTLKKSGLEH 319

Query: 202 LSLYQLTIEKGTLFYKM 218
           L ++  +   GT   +M
Sbjct: 320 LHVFSYSDRSGTKASEM 336


>gi|218886426|ref|YP_002435747.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218757380|gb|ACL08279.1| RNA modification enzyme, MiaB family [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 478

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 76/236 (32%), Gaps = 28/236 (11%)

Query: 8   ENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT 66
            +     G      +V+    C   C YC     V   +  Q++  ++    ++   +L 
Sbjct: 137 RDAQLDAGPVPPSAFVNIMQGCDNFCAYC----IVPYTRGRQKS--RAADAVVRECAELV 190

Query: 67  GPRSISSIFFGGGTPSLIEPQN---------------IALILDGIAKNWTVSSNVEITIE 111
              +      G    S  +                   A +L  +A    ++    +T  
Sbjct: 191 ERGAKEITLLGQNVNSYGQDAEAARQATVAGDGNAVTFAELLHRVAALPGLARLRFVT-- 248

Query: 112 ANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P  +       +        R+ L +QS  ++ L+ +GR ++ +  +  +H  +   P
Sbjct: 249 PHPKDIAPEVIDAFGTLDNLCPRLHLPMQSGSDRILKAMGRKYDMARYMDIVHRLKAARP 308

Query: 170 RM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +  S D+I   P +T   +E  L    +        +  +   GT    +    D
Sbjct: 309 DIQLSTDIIVGFPGETEQDFEDTLSAMRAVGFAASFSFCYSDRPGTRAEMLPGKLD 364


>gi|160894019|ref|ZP_02074798.1| hypothetical protein CLOL250_01574 [Clostridium sp. L2-50]
 gi|156864397|gb|EDO57828.1| hypothetical protein CLOL250_01574 [Clostridium sp. L2-50]
          Length = 616

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 13/221 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC  +S  +R +    + +       +   Q      +  + F   T +    +
Sbjct: 221 CPFRCSYC-LSSIDKRVRFRSFDLV-------KKELQFFLDHQVKQVKFIDRTFNC-SHE 271

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   I   I ++    +N    I A+  + E        + G  ++ +GVQS   Q++R 
Sbjct: 272 HAMEIWRYINEHDNGITNFHFEIAADILNEEELELVNSLRPGAIQMEIGVQSTNLQTIRE 331

Query: 148 LGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + R  +  +    +          +  DLI  LP +    +        +   + L L  
Sbjct: 332 IDRVMDVDKLAKIVARIHQGHNVHVHLDLIAGLPYEDYESFAHSFNDVYAMKPEQLQLGF 391

Query: 207 LTIEKGTLFY---KMHKDGDLVLPSENVAVDLYNLTQSITS 244
           L + KG+  +   + +       P   V    +     I  
Sbjct: 392 LKVLKGSKMHDNAERYGLQYTSCPPYEVLFTKWISYDEILR 432


>gi|197303727|ref|ZP_03168764.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
           29176]
 gi|197297247|gb|EDY31810.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
           29176]
          Length = 438

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C + C YC     +  Y  G+    +S     + +R L        +  G    S  I+ 
Sbjct: 161 CNQFCTYC-----IIPYARGRVRS-RSMEDVTEEVRTLAENGYKEVVLTGIHLSSYGIDF 214

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +LD I     +     I +    P  +     +   K         L +QS    
Sbjct: 215 DKERHLLDLIRAVHQIEGIERIRLGSLEPGIITEEFAEAISKLPKMCPHFHLSLQSGCNA 274

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R + + E      + R  F    ++ D+I   P +T  ++E       S     
Sbjct: 275 TLKRMNRRYTSEEYAERCGILRKYFENPALTTDVIVGFPGETEEEFEASRNFVDSIDFYE 334

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
             +++ +  +GT    M   
Sbjct: 335 THIFKYSRREGTKAAVMPDQ 354


>gi|15605955|ref|NP_213332.1| hypothetical protein aq_474 [Aquifex aeolicus VF5]
 gi|6226379|sp|O66772|Y474_AQUAE RecName: Full=Putative methylthiotransferase aq_474
 gi|2983129|gb|AAC06733.1| hypothetical protein aq_474 [Aquifex aeolicus VF5]
          Length = 410

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 73/238 (30%), Gaps = 23/238 (9%)

Query: 26  PF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           PF      C K C +C     V  Y  G+   +   L ++    +L   +    +   G 
Sbjct: 144 PFLKVQEGCNKFCTFC-----VIPYARGKVRSVD--LEKIVHQVKLLAQKGFKEVVLTGT 196

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLG 136
             S         +   + +   +     I +   +   ++    +     +       L 
Sbjct: 197 QLSQYGWDKGYNLYTLLTELIKIEGIELIRLSSMHIKEMDKELLKLIVSEEKIAPHFHLS 256

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRA 194
           +QS   + L  + R +   E    ++          +  D+I   P ++   ++   +  
Sbjct: 257 LQSGSNRILELMDRGYTREEYEEVVNFIVENRPISSIGTDVIVGFPTESEEDFQETYEFL 316

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               + ++ ++  +    T   K+       LP E +  +   + + +        YE
Sbjct: 317 KRIPISYMHIFPYSDRPFTKASKL----KPKLP-ERIKKERVRILKELDQKKRQEFYE 369


>gi|163853462|ref|YP_001641505.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Methylobacterium extorquens PA1]
 gi|163665067|gb|ABY32434.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Methylobacterium extorquens PA1]
          Length = 508

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 80/226 (35%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++          +     + +L     +  I F    P++   +
Sbjct: 202 CPHPCTYCGQRGFWTRWRHRDP------VRFAAELARLHREHGVRVINFADENPTV--SK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +            V   +  +  A+    + +    Y++AG  R  LG++S +  +L  
Sbjct: 254 KVWRTFLEALIAENVDLILVGSTRADDIVRDADILPLYKRAGWERFLLGLESTDTTTLDL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +    +    AI L R          +    ++    +   L++ L+Y  D + +  +
Sbjct: 314 IRKGATTTTDREAIRLLRANGILSMATWVVGFEEERDRDYWRGLRQLLAYDPDQIQMLYV 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           T  + T ++++ ++  ++     +    ++    + +   +  + +
Sbjct: 374 TPHRWTPYFRLAEERRVI----QLDRRRWDYKHQVLATRHMPPWRV 415


>gi|85858921|ref|YP_461123.1| biotin synthase [Syntrophus aciditrophicus SB]
 gi|85722012|gb|ABC76955.1| biotin synthase [Syntrophus aciditrophicus SB]
          Length = 351

 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 64/205 (31%), Gaps = 23/205 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC     N  ++RY++     +++                I ++    G  S 
Sbjct: 74  YCERNCLYCGLRRVNRQLKRYRMSNREILEA--------AFAVKAAKIPTLVLQSGEDSF 125

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  ++  I     +   V +++   P +    ++  +R+AG +R  L  ++    
Sbjct: 126 YTTEKLCSLIQSIKAETGL--VVTLSLGERPRN----DYHAFREAGADRYLLKHETASPS 179

Query: 144 SLRFLGRNHN---ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                GR H        +  +   + +       ++  LP Q       ++    S   D
Sbjct: 180 LY---GRLHPDSRQENRLQCLKWLKELRYETGAGIMVGLPGQDAAVLADDILLISSLKAD 236

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLV 225
              +        T          L 
Sbjct: 237 MAGIGPFLPHPQTPLAACPSGMVLP 261


>gi|34557848|ref|NP_907663.1| 2-methylthioadenine synthetase [Wolinella succinogenes DSM 1740]
 gi|34483566|emb|CAE10563.1| conserved hypothetical protein-2-methylthioadenine synthetase
           [Wolinella succinogenes]
          Length = 416

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG--GTPSLIE 85
           C   C YC            +   +   +++++ + Q      + +    G  G  S + 
Sbjct: 144 CDFSCSYC---IIPSVRGKARSLPVDRIVSQVEILAQHGFGEFVLTGTNVGSYGKESGLN 200

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
              +A +L  +++   V      ++E  PS ++    +   +  + R + + +Q    + 
Sbjct: 201 ---VAKLLKALSQIKGVKRLRLGSLE--PSQIDAEFMELLEEPFMARHLHIALQHTSPKM 255

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R + A   +A           +  D I   P ++   W+   +R +++ + HL  
Sbjct: 256 LQIMNRRNEAQGDLALFERLAQKGYALGTDFILGHPGESEEVWKEAWERFVAFPLTHLHA 315

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +  +  +GT              S N+A +   + Q     +  H  +
Sbjct: 316 FVYSPREGT-----PSSLMKDRISGNIAKERMRILQERVRENNHHFRQ 358


>gi|237725195|ref|ZP_04555676.1| biotin synthase [Bacteroides sp. D4]
 gi|229436461|gb|EEO46538.1| biotin synthase [Bacteroides dorei 5_1_36/D4]
          Length = 345

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +     T ++  R+       + +  GG  P  +  +
Sbjct: 62  CRNNCYYCG----IRKGNPAVARYALKRETILECCREGYALGFRTFVMQGGEDP-ALTDK 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +  I   ++     +  I  +        ++ + +AG NR  L  ++  EQ  R 
Sbjct: 117 WIEATVAAIRNEFS-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETHNEQHYRK 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   + I  +    ++   P QT+     +L     +    + +  
Sbjct: 172 LHPEEMSLKHRLQCLQWLKEIGYQTGTGIMVGSPGQTLPHLVEDLLFIEQFHPQMIGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T F    
Sbjct: 232 FIPHHETPFGMEP 244


>gi|282600854|ref|ZP_05979919.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Subdoligranulum variabile
           DSM 15176]
 gi|282571154|gb|EFB76689.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Subdoligranulum variabile
           DSM 15176]
          Length = 447

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQL-TGPRSISSIFFGGGTPSLI 84
           C   C YC       R +  + + I +   ++  +  +++    ++++S   G G P  I
Sbjct: 165 CDNFCTYCIVPYVRGRERSREPDAILAEFRDLITKGYKEITLLGQNVNSYGKGLGNP--I 222

Query: 85  EPQNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +  ++  +L        V  + +I  + ++P                    I L VQS  
Sbjct: 223 DFADLLNLLCA------VPGDYQIRFMTSHPKDASRKLIDTIAAQPHMCKHIHLPVQSGS 276

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++   + +  +  ARN  P ++F  D+I   P +T   +E  L+       
Sbjct: 277 NRLLQQMNRHYTVEQYLDLVDYARNKIPGVTFSSDIIVGFPGETEEDFEATLELVRKVGY 336

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
             L  +  +   GT   KM   
Sbjct: 337 MQLFTFIYSKRNGTPAAKMPDP 358


>gi|219854162|ref|YP_002471284.1| hypothetical protein CKR_0819 [Clostridium kluyveri NBRC 12016]
 gi|219567886|dbj|BAH05870.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C + C YC   F       K             ++ +++L        I  G    S   
Sbjct: 177 CNRFCSYCLIPFARGPVCSKEPD--------KIIKEVKKLQVNNFKEIILSGIHIASYGV 228

Query: 84  -IEP-QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQS 139
            I    N+  IL+ I K   +      +I  +P     +                L +QS
Sbjct: 229 DISGSWNLIKILEEIDKIKGIDRVRIGSI--DPKFFTEDIINRMASLTKLCPHFHLSLQS 286

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             + +L  + R +  +E    ++  R+    +S   D+I   P +T  ++          
Sbjct: 287 GCDSTLNRMNRKYTTTEYEKIVYKLRDSIKDVSITTDIIVGFPGETEEEFYKTYDFLNKI 346

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +  + +++ +  +GT    M +  D  +  ++                 ++ +
Sbjct: 347 ELSKIHVFKYSRREGTKAADMKEQIDGKI--KDERSSKIIKLNERLENKFMNRF 398


>gi|302348200|ref|YP_003815838.1| hypothetical protein ASAC_0400 [Acidilobus saccharovorans 345-15]
 gi|302328612|gb|ADL18807.1| hypothetical protein ASAC_0400 [Acidilobus saccharovorans 345-15]
          Length = 437

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 76/243 (31%), Gaps = 38/243 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF----------------LTEMQWMRQLTGPRSI 71
           C++ C +C               +++S+                  E++   Q      +
Sbjct: 153 CLENCSFC--------ETKLARRYLKSYPPRAIVSIVRDLVQGGAREIRLTGQDAAAYGV 204

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV- 130
                  G P L  P  IA ILD +   + +   +    +A    +  +    YR   V 
Sbjct: 205 DL----PGKPRL--PDLIADILDKVPGEYRLRIGMMTPNQA--MEIIDDLLDVYRDGRVF 256

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE 188
               + VQS +++ L+ + R +  +E        +  +P    + D+I   P +    + 
Sbjct: 257 KFFHIPVQSGDDRVLKIMNRRYTVAEFKELHSKVKAKYPSSLFATDIIVGHPGEDEGAFM 316

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++       + + L Q +I   T    M +  +   P +                   
Sbjct: 317 NSVRLVEELKFERVYLAQYSIRPRTASASMPQVPE---PVKKERSLRIQEVIKKIGVEIY 373

Query: 249 HAY 251
            +Y
Sbjct: 374 GSY 376


>gi|297735074|emb|CBI17436.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 62/231 (26%), Gaps = 13/231 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C            +   ++S + E   + +L        +  G    S  +  
Sbjct: 349 CNNMCSFC---IVPFTRGRERSRPVESIVRE---VAELWKEGVKEVMLLGQNVNSYNDAS 402

Query: 88  NIALILDGIAKNW---TVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                ++  A                  +P           R        I L  Q+   
Sbjct: 403 GFDKEVEPGANWKLSEEFPEMRFRYTSPHPKDFPDELLYLMRDRYNVCKSIHLPAQTGSS 462

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R +     +  +   R I P +    D I     +T  ++   +    +   D
Sbjct: 463 TVLERMRRGYTREAYLDLVQKIRRIVPDVGITSDFICGFCGETEEEYADTISLVKAVGYD 522

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              ++  ++ + T  ++ + D       +    ++  + +  T        
Sbjct: 523 MAYMFAYSMREKTHAHRNYVDDVPDNIKQRRLAEMIEVFRESTGQCYDSQI 573


>gi|254563391|ref|YP_003070486.1| magnesium-protoporphyrin IX monomethyl ester cyclase
           [Methylobacterium extorquens DM4]
 gi|254270669|emb|CAX26673.1| Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) [Methylobacterium extorquens DM4]
          Length = 508

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 80/226 (35%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++          +     + +L     +  I F    P++   +
Sbjct: 202 CPHPCTYCGQRGFWTRWRHRDP------VRFAAELARLHREHGVRVINFADENPTV--SK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +            V   +  +  A+    + +    Y++AG  R  LG++S +  +L  
Sbjct: 254 KVWRTFLEALIAENVDLILVGSTRADDIVRDADILPLYKRAGWERFLLGLESTDTTTLDL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +    +    AI L R          +    ++    +   L++ L+Y  D + +  +
Sbjct: 314 IRKGATTTTDREAIRLLRANGILSMATWVVGFEEERDRDYWRGLRQLLAYDPDQIQMLYV 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           T  + T ++++ ++  ++     +    ++    + +   +  + +
Sbjct: 374 TPHRWTPYFRLAEERRVI----QLDRRRWDYKHQVLATRHMPPWRV 415


>gi|169333656|ref|ZP_02860849.1| hypothetical protein ANASTE_00040 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259650|gb|EDS73616.1| hypothetical protein ANASTE_00040 [Anaerofustis stercorihominis DSM
           17244]
          Length = 348

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCD--F-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +  RY++ +E+        +    +        +I   GG    
Sbjct: 61  YCKNDCYYCGIRCSNKNADRYRLSKED--------ILLCAEEGYKLGFRTIVLQGGEDPC 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  +   +      +  I  +      ++++ Y  AG NR  L  ++ +E 
Sbjct: 113 FTDEKMVDIISALRNLYP-----DCAITLSIGEKSYDSYKKYYDAGANRFLLRHETADEV 167

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  +N +       ++  ++I  ++    +   P Q+      +L        + +
Sbjct: 168 HYGKLHPKNLSLENRKKCLYDLKDIGYQVGTGFMVGSPYQSAENLADDLLFIKELNPEMV 227

Query: 203 SLYQLTIEKGTLF 215
            +      K T F
Sbjct: 228 GIGPFIAHKDTPF 240


>gi|126465996|ref|YP_001041105.1| RNA modification protein [Staphylothermus marinus F1]
 gi|126014819|gb|ABN70197.1| RNA modification enzyme, MiaB family [Staphylothermus marinus F1]
          Length = 429

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 26/214 (12%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y+     C+  C +C         K  +   +   + +++   +    + +  I   G  
Sbjct: 140 YLPIQEGCLGNCSFC-------IVKNARRQLVSYPINKIKNTVKELVGKGVVEIEITGQD 192

Query: 81  PS-----LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK------A 128
            +     L   Q +  +L+ +     +  N  I I   NP ++  N      +       
Sbjct: 193 TASYGLDLYGKQMLPNLLEELD---GIKGNFMIRIGMMNPDTL-ANILDELIEVIKNSAH 248

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               + + +QS  ++ LR + R +   E    + + R   P +S   D+I   P +    
Sbjct: 249 IYRFLHIPLQSGSDKVLRIMRRKYTVDEYREIVKILRKKIPEISIATDIIVGHPGEEEED 308

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +E  L        + +     +I   T    + +
Sbjct: 309 FEQTLDIIKELKFERVHPAVYSIRPNTYSASLRQ 342


>gi|90083062|dbj|BAE90613.1| unnamed protein product [Macaca fascicularis]
          Length = 464

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 102 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNL- 159

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQ  
Sbjct: 160 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQPA 213

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 214 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 273

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   KM
Sbjct: 274 FPSLFINQFYPRPGTPAAKM 293


>gi|295706646|ref|YP_003599721.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium
           DSM 319]
 gi|294804305|gb|ADF41371.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium
           DSM 319]
          Length = 452

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKEVVAQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
           N+A +L D  ++   +      +IEA+   +     +     +  V  + + +QS     
Sbjct: 210 NLAQLLRDLESQVKGLKRIRISSIEAS--QITDEVIEVLDQSEMVVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  +   P ++   D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMEFFGERLNRLKEALPGLAITSDVIVGFPGETEEEFMETYNFIKEHGFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + ++ V   +     L +   S       E+
Sbjct: 328 HVFPYSKRTGTPAARMTDQIDEEVKNQRVHRLIELSNQLAKEYASTFEGEVLEV 381


>gi|260173732|ref|ZP_05760144.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. D2]
 gi|315921997|ref|ZP_07918237.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695872|gb|EFS32707.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 804

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   Y+   E +      E     Q    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YRTKAEIYDLLPAEECLRQAQYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D +      SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVRYMRRHSS---IQLCASLGLLNEEELRSLHEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENEQP 308


>gi|217967463|ref|YP_002352969.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
           6724]
 gi|217336562|gb|ACK42355.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
           6724]
          Length = 441

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 75/250 (30%), Gaps = 27/250 (10%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C   C YC     +  Y  G+E         ++ +  L     +     G    
Sbjct: 150 IPIIYGCNNFCTYC-----IVPYLRGKEKSRDP-QEIIKEIEHLANQGVVEVTLLGQNVD 203

Query: 82  SL---IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           S    +   ++A +L  I K   +       + ++P  V                   L 
Sbjct: 204 SYGKDLGNVDLADLLVEIHKIPGIKRIRF--LTSHPRDVSDKLINVVATHPKICPHWHLP 261

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           +Q+  ++ LR +GR +  +E  A I    A+      S D+I   P +    +    +  
Sbjct: 262 LQAGSDRILRRMGRGYTYNEYKALIEKIRAKIPRASFSTDIIVGFPGEEEEDFLATRRAL 321

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
                D ++L   +   GT                      ++  +++            
Sbjct: 322 EEIKFDTVNLAIYSKRPGT-----PAASYDDPVPYETKKKWFDELENLQRKIIYER---- 372

Query: 255 NHSFLGAESL 264
           N S +G E L
Sbjct: 373 NLSMIGKEEL 382


>gi|291529131|emb|CBK94717.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale M104/1]
          Length = 434

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   R +V    F        +          ++ I          E
Sbjct: 153 CNQFCSYC----IIPYARGRVRSRRFENVIAEVERLAANGFKEVVLTGIHLSSYGVDFEE 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +     +      ++E  P  V  +      K         L +QS  + 
Sbjct: 209 ATGLLELIQAVNAVKGIERIRLGSLE--PKIVTEHFASELSKLDKICPHFHLSLQSGCDA 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R +   E      L R  F    ++ D+I   P +T  ++E             
Sbjct: 267 TLKRMNRKYTTKEYERGCELLRKYFVHPAITTDVIVGFPGETEEEFEQTKAYLEHIHFYE 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ +  KGT    M    D
Sbjct: 327 MHIFKYSKRKGTRAAVMPDQID 348


>gi|297569099|ref|YP_003690443.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925014|gb|ADH85824.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 448

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 69/194 (35%), Gaps = 14/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC + +   R    ++            +  L     +  IFF     +     
Sbjct: 186 CPYRCAYCSYPNIEGRSLRYRDP-----EETAAEVAWLAAEHRVRYIFFTDSVFND-GAG 239

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  L+ + + KN   +          P ++E  + +  ++AG++ + +G  +  +++L  
Sbjct: 240 HFRLLAEALIKNGNQTPWCAF---FRPQNLEREDLRLLKRAGLSAMEIGTDAACDRTLAG 296

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  + ++ + A  LA       +  +++  P +        L   L    +   ++  
Sbjct: 297 LEKGFDFTQVLHANRLAAEEKIPCAHFVMFGGPDEDRKTLAEGLDNLLRL--EQCIVFAF 354

Query: 208 T---IEKGTLFYKM 218
           +   I  GT     
Sbjct: 355 SGIRILPGTALAAR 368


>gi|153953540|ref|YP_001394305.1| oxidoreductase [Clostridium kluyveri DSM 555]
 gi|146346421|gb|EDK32957.1| Predicted oxidoreductase [Clostridium kluyveri DSM 555]
          Length = 434

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 22/234 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-- 83
           C + C YC   F       K             ++ +++L        I  G    S   
Sbjct: 148 CNRFCSYCLIPFARGPVCSKEPD--------KIIKEVKKLQVNNFKEIILSGIHIASYGV 199

Query: 84  -IEP-QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQS 139
            I    N+  IL+ I K   +      +I  +P     +                L +QS
Sbjct: 200 DISGSWNLIKILEEIDKIKGIDRVRIGSI--DPKFFTEDIINRMASLTKLCPHFHLSLQS 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             + +L  + R +  +E    ++  R+    +S   D+I   P +T  ++          
Sbjct: 258 GCDSTLNRMNRKYTTTEYEKIVYKLRDSIKDVSITTDIIVGFPGETEEEFYKTYDFLNKI 317

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            +  + +++ +  +GT    M +  D  +  ++                 ++ +
Sbjct: 318 ELSKIHVFKYSRREGTKAADMKEQIDGKI--KDERSSKIIKLNERLENKFMNRF 369


>gi|139439619|ref|ZP_01773032.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC
           25986]
 gi|133774960|gb|EBA38780.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC
           25986]
          Length = 449

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 77/230 (33%), Gaps = 22/230 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C + C +C       RY       I      +  +R L        +  G   G   +  
Sbjct: 152 CNRFCSFCMIPYIRGRYHSRNSESI------ISEVRDLVAGGVREIVLIGQDTGIWGTDF 205

Query: 85  --------EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
                    P+N+A +L  +A+     +     +   P  +        R     +  I 
Sbjct: 206 ADEDVADGSPRNLAQLLRAVAEAVRPHNVWVRVLYLQPEGMTDELIDTIRDTPEVLPYID 265

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           + VQ  + + L+ + R+ +  E        R   P +      +   P +T  ++   + 
Sbjct: 266 IPVQHCDARILKAMRRSGSRQELEDLFRDLRERIPGIVIRSTAMVGFPTETDDEFRDLID 325

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              +   D+ S++  + E+G+L  KM    D        A +  +L +S+
Sbjct: 326 FMDTVGFDYTSVFAYSREEGSLAAKMEGQVD-EEVKLERAQEAMDLAESL 374


>gi|298675805|ref|YP_003727555.1| MiaB-like tRNA modifying enzyme [Methanohalobium evestigatum
           Z-7303]
 gi|298288793|gb|ADI74759.1| MiaB-like tRNA modifying enzyme [Methanohalobium evestigatum
           Z-7303]
          Length = 433

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 73/205 (35%), Gaps = 22/205 (10%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIF-- 75
           +H       C  +C YC     VR  +   ++F I S + +++            +    
Sbjct: 143 IHICQISQGCNNRCAYC----VVRTARGKLKSFDIDSIVEDVRKAVSEGCREIWITSQDN 198

Query: 76  ----FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV- 130
                      L+    +   +  I  N+ +   +       P  +  +  + Y    + 
Sbjct: 199 AQYGIDRQNGVLLP--QLLDRVASIEGNFKIRVGMMNPFSVYP--ILDDLLKVYENNKIY 254

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWE 188
             + L +QS  E+ L ++ RN+  SE    I   R+ F  ++   D+I   P +T   + 
Sbjct: 255 KFLHLPIQSASEKVLGYMNRNYTMSEVDEIITKFRSRFNDLTLVTDIIVGFPGETEDDFY 314

Query: 189 MELQRALSYAVDHLSLYQLTIEKGT 213
             +    +Y  D +++ + T    T
Sbjct: 315 KSIDWVKNYRPDKVNISRYTPRPHT 339


>gi|284036691|ref|YP_003386621.1| radical SAM protein [Spirosoma linguale DSM 74]
 gi|283815984|gb|ADB37822.1| Radical SAM domain protein [Spirosoma linguale DSM 74]
          Length = 737

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 59/169 (34%), Gaps = 14/169 (8%)

Query: 31  KCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           KC +CD    +++RY+    +        ++ + + TG      +           P  +
Sbjct: 361 KCSFCDITLDYIKRYEPVTASL---LCDRIEEIIEQTGQTGFHFVDEAA------PPALM 411

Query: 90  ALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             + ++ I +  TV+    I  E    S   +     + +G   +S G++   ++ L  +
Sbjct: 412 RDLAMEIIRRKLTVTWWTNIRFEV---SFTPDLCALLKASGCIAVSGGLEVASDRLLERM 468

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +    ++              +   L+Y  P QTM +    L+     
Sbjct: 469 KKGVTVAQVARVADAFTQAGIMVHAYLMYGFPTQTMQETIDSLEMVRQL 517


>gi|113952803|ref|YP_729952.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. CC9311]
 gi|113880154|gb|ABI45112.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. CC9311]
          Length = 436

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 16/220 (7%)

Query: 7   YENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL 65
            E+  T +  +S   +V+  + C ++C YC            Q    +S L EM+ +   
Sbjct: 119 LEDLTTARRDSSTCAWVNVIYGCNERCTYC---VVPSVRGKEQSRLPESILLEMEGLAAR 175

Query: 66  TGPRSISSI-----FFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE 118
            G + I+ +      +G   P +  E +    + D + +   V     +     +P    
Sbjct: 176 -GFKEITLLGQNIDAYGRDLPGITAEGRRQHTLTDLLHQVHDVEGIERLRFATSHPRYFT 234

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
                             +  QS + + L+ + R +        I   R   P   +S D
Sbjct: 235 ERLIDACADLPKVCEHFHIPFQSGDNELLKAMARGYTVERYRRIIDRIRKRMPDAAISAD 294

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +I A P +T  Q+   L        D ++    +    T 
Sbjct: 295 VIVAFPGETDAQYRRTLALIEEIGFDQVNTAAYSPRPNTP 334


>gi|48478548|ref|YP_024254.1| oxygen-independent coproporphyrinogen III oxidase [Picrophilus
           torridus DSM 9790]
 gi|48431196|gb|AAT44061.1| oxygen-independent coproporphyrinogen III oxidase [Picrophilus
           torridus DSM 9790]
          Length = 346

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 80/237 (33%), Gaps = 15/237 (6%)

Query: 20  GVYVHW----PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
            +Y+      P+   +C +C        YK  +  F +    +++ ++        S   
Sbjct: 114 SLYIRITNGCPW--NRCTFCSL------YKDVKYGFNKYLCDQIKALKDYFKNSMESRTG 165

Query: 76  FGGGTPSLI--EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
              G  + I      +   +  I +++ +          +P +   ++    +  G   I
Sbjct: 166 IFLGDANAIGINKNILFKDIKIIKEHFDMPFYAFSDSFTSPLNTGYDDLINLKNHGFKMI 225

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G++S     L+F  +N +       I++ ++    +   ++        +      + 
Sbjct: 226 YIGLESASRSVLKFFNKNLSIETTKRYINMIKDSGINLGIIIMDIKGDLYKSHVRETSRF 285

Query: 194 ALSYAVDHLSL-YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             S  +D   + Y   +  G    +     D+ L   N +++ +  T +  S + + 
Sbjct: 286 IKSLNLDKDDILYISRLIPGFELREHAYYNDVSLTGSNESIEKFIETDARISRYNIR 342


>gi|260438409|ref|ZP_05792225.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
           DSM 2876]
 gi|292808995|gb|EFF68200.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
           DSM 2876]
          Length = 473

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP----SL 83
           C   C YC     +  Y  G+E   +     ++ + +         +  G        +L
Sbjct: 192 CNNFCSYC-----IVPYVRGRERS-REPKDIIREVERFVKEGVKEVMLLGQNVNSYGKTL 245

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             P + A +L  ++K   +       +  +P  +     +         + I L +QS  
Sbjct: 246 ENPISFAELLKEVSKVEGLERIRF--MTPHPKDLSDELIETMAVTPKVCHHIHLPLQSGS 303

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R++     +  +   R   P   ++ D+I   P +T   +   +        
Sbjct: 304 SRILKLMNRHYTKESYLELVKKIRKRMPDAALTTDIIVGFPGETEEDFNDTMDVVREAEF 363

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +  +GT    M
Sbjct: 364 DSAYTFIYSKREGTPAASM 382


>gi|328948729|ref|YP_004366066.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM
           2489]
 gi|328449053|gb|AEB14769.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM
           2489]
          Length = 482

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 114 PSSVEVNNFQGYRKAGVN-RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           P  +            V     L +QS  +  L  + R +   +   A+ L R       
Sbjct: 271 PQHITKELCAVLSDKRVQPFFHLSIQSGSDSILNSMRRPYKREQVENAVQLLRECKMNPF 330

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +S D+I   P +T   +E             +  +  +   GTL + M
Sbjct: 331 ISCDIIAGFPGETEDDFEQTKSLCKKMNFAWIHAFPFSARPGTLAFSM 378


>gi|288800434|ref|ZP_06405892.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288332647|gb|EFC71127.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 441

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 31/207 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL--TGPRSISSI----------- 74
           C   C YC     +  Y  G+E       + +  +R L   G R ++ +           
Sbjct: 155 CDNFCHYC-----IVPYTRGRERSRD-VESVLAEVRDLCKQGYREVTLLGQNVNSYSFEN 208

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
              G   S     ++  ++        +  +      ++P  +  +  +   +       
Sbjct: 209 EVTGEVTSF---PDLLRLVAREVPTMRIRFST-----SHPKDMSDDTLRVIAEEPNVCKH 260

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEME 190
           I L VQS  ++ L+ + R +  +  +  +   + I P   +S D+      +     +M 
Sbjct: 261 IHLPVQSGSDKVLKLMNRKYTVAWYLDRVKAIKEIIPDCGISTDIFVGYHGEEEEDHQMS 320

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYK 217
           L+   +   D   +++ +   GT   K
Sbjct: 321 LELMKTVGYDSSFMFKYSERPGTYASK 347


>gi|153816397|ref|ZP_01969065.1| hypothetical protein RUMTOR_02649 [Ruminococcus torques ATCC 27756]
 gi|317500751|ref|ZP_07958968.1| radical SAM protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089771|ref|ZP_08338665.1| hypothetical protein HMPREF1025_02248 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846285|gb|EDK23203.1| hypothetical protein RUMTOR_02649 [Ruminococcus torques ATCC 27756]
 gi|316897844|gb|EFV19898.1| radical SAM protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330403654|gb|EGG83209.1| hypothetical protein HMPREF1025_02248 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 352

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 22/208 (10%)

Query: 20  GVYVH--WPF---CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI 71
            VY+     F   C   C YC     N +  RY++ +E  +           ++      
Sbjct: 55  SVYIRGLIEFTNYCKNDCFYCGIRKSNRNANRYRLTKEQILSCC--------EMGYALGF 106

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN 131
            +    GG         +  I+  I   W   S+  IT+     S    +++    AG N
Sbjct: 107 RTFVLQGGEDGSFTDDRLTDIISSIRTRW---SDCAITLSIGERSY--ESYKQLYDAGAN 161

Query: 132 RISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
           R  L  ++ ++     L     +A+     +   + I  ++    +   P QT      +
Sbjct: 162 RFLLRHETYDDTHYGKLHPPALSAARRKQCLFDLKKIGYQVGTGFMVGSPYQTFENLADD 221

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +          + +        T F   
Sbjct: 222 MLFLKELNPQMVGIGPFIPHHDTPFADQ 249


>gi|325478525|gb|EGC81637.1| tRNA methylthiotransferase YqeV [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 431

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 4/117 (3%)

Query: 111 EANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
              P  +     +  +  K   +   L +QS  +  L+ + R ++       + L R +F
Sbjct: 231 SMEPRHITREFLERMKATKKACDHFHLSLQSGSDDILKAMNRKYDTKIFKEKVDLIREVF 290

Query: 169 PRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           P      D+I   P +T                    L++ +   GT    M  + D
Sbjct: 291 PNAGLTTDIIVGFPTETDENHIETKNFVKDIKFAKTHLFKYSKRDGTKAATMKPEVD 347


>gi|295087799|emb|CBK69322.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           apoenzyme /biotin synthase [Bacteroides xylanisolvens
           XB1A]
          Length = 851

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   + +      E     +    + ++       G  PS   
Sbjct: 172 CPENCKWCAQSSH---YKTKADIYDLLPAEECLRQAKYNEAQDVNRFSLVTSGRKPS--- 225

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D + +    SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 226 PKQITQLCDTVRQMRRHSS---IQLCASLGLLNEEELRSLYEAGITRYHCNLET-APSYF 281

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   +  A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 282 SKLCTTHTQEQKRATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLKELNVQSIPIN 340

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 341 LLSPIPGTPLENEQP 355


>gi|294501299|ref|YP_003564999.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM
           B1551]
 gi|294351236|gb|ADE71565.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM
           B1551]
          Length = 452

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 79/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKEVVAQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
           N+A +L D  ++   +      +IEA+   +     +     +  V  + + +QS     
Sbjct: 210 NLAQLLRDLESQVKGLKRIRISSIEAS--QITDEVIEVLDQSEMVVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  +   P ++   D+I   P +T  ++         +    L
Sbjct: 268 LKRMRRKYTMEFFGERLNRLKEALPGLAITSDVIVGFPGETEEEFMETYNFIKEHGFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M    D  + +E V   +     L +   S       E+
Sbjct: 328 HVFPYSKRTGTPAARMTDQIDEEVKNERVHRLIELSNQLAKEYASTFEGEVLEV 381


>gi|95930979|ref|ZP_01313708.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95132988|gb|EAT14658.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 573

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C             +  ++SF +  ++        R I  +     T +  +P
Sbjct: 190 CPYSCAFC---------MSALDTRVRSFSIERIERDLLWLMKREIPKVKLVDRTFNY-DP 239

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQS 144
           +    I   I ++   S       E     ++    +  +    +  +  +G+QS   ++
Sbjct: 240 RRAYHIFSFILQHNRCSH---FHFEIGAHLLDEATLELLKTVPDDMFQFEIGIQSTLPET 296

Query: 145 LRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+ + R+    +    I  L       +  DLI  LP + M Q      + ++   DHL 
Sbjct: 297 LKTIKRHAPQQQLFDNIRALIETTQVHLHLDLIAGLPGEDMAQMVKGFDQVMALNPDHLQ 356

Query: 204 LYQLTIEKGTLFYKMHKDGDL 224
           +  + +  G    +  +   L
Sbjct: 357 IETVKLLPGAPLRQQAQHHQL 377


>gi|265754283|ref|ZP_06089472.1| biotin synthase [Bacteroides sp. 3_1_33FAA]
 gi|263234992|gb|EEZ20547.1| biotin synthase [Bacteroides sp. 3_1_33FAA]
          Length = 345

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+       +     T ++  R+       + +  GG  P  +  +
Sbjct: 62  CRNNCYYCG----IRKGNPAVARYALKRETILECCREGYALGFRTFVMQGGEDP-ALTDK 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I   +  I   ++     +  I  +        ++ + +AG NR  L  ++  EQ  R 
Sbjct: 117 WIEATVAAIRNEFS-----DCAITLSLGEKSREAYERFFRAGANRYLLRHETHNEQHYRK 171

Query: 148 LGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +    +  +   + I  +    ++   P QT+     +L     +    + +  
Sbjct: 172 LHPEEMSLKHRLQCLQWLKEIGYQTGTGIMVGSPGQTLPHLVEDLLFIEQFHPQMIGIGP 231

Query: 207 LTIEKGTLFYKMH 219
                 T F    
Sbjct: 232 FIPHHETPFGMEP 244


>gi|254797167|ref|YP_003082007.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neorickettsia risticii
           str. Illinois]
 gi|254590407|gb|ACT69769.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neorickettsia risticii
           str. Illinois]
          Length = 454

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS-FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K   +C F              I+  +   +    +     ++      G   +L   
Sbjct: 170 CDK---FCAFCVVPYTRGAEYSRPIEEVYREALSLTTKGVKEITLLGQNVNGYHGALNSG 226

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            N+  +   I+    + S   I     +P  +    +  +      +  + L VQS  ++
Sbjct: 227 DNVFNLGQLISHLGKIPSLKRIRYTTSHPVDMHKELYDAHANESKLMPFVHLPVQSGSDK 286

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +  ++ +  IH  +N    +  S D I   P ++   ++  L          
Sbjct: 287 ILKKMNRKYTTADYLKIIHKFQNARSDIAFSSDFIVGFPGESDDDFQQTLALIEQVNYAQ 346

Query: 202 LSLYQLTIEKGTL 214
              ++ +   GT 
Sbjct: 347 CYSFKYSPRPGTP 359


>gi|77748655|ref|NP_642776.2| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|229891228|sp|Q8PJR9|MIAB_XANAC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 484

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGTPS 82
           C  YC F      R +     F    +   Q   Q       L    +     +G     
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGD 249

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++ L++  IA+   +      T  ++P     +    YR      N + L VQ+ 
Sbjct: 250 AAQYADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|302871487|ref|YP_003840123.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574346|gb|ADL42137.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 535

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 79/223 (35%), Gaps = 18/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFAPLEKVFEELDYL----FKKQVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S   ++  E +P+ ++ +       +  N  R+ +G+QS   Q+L
Sbjct: 215 RAIKIIEFCKQK---SQATQVHFEIDPTLLDNDIISAINNSKDNLFRLEIGLQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R ++       +         +   DLI  LP +    ++  L + L Y  D + L
Sbjct: 272 DAIDRFYDIDRIDKNLKKLMENKKAIVHLDLIAGLPFEDFLSFKKSLDKTLLYFADEVQL 331

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
             L + KGT        +       P   V  + +   + I  
Sbjct: 332 GFLKMLKGTKIRNEATKYNYEFFKDPPYEVISNSFISFEEIYK 374


>gi|149923413|ref|ZP_01911818.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Plesiocystis pacifica SIR-1]
 gi|149815720|gb|EDM75246.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Plesiocystis pacifica SIR-1]
          Length = 298

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 22/250 (8%)

Query: 28  C-VKKCPYCDFNS----HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   +C YCD         + +   + + I++     +  R+      +       G   
Sbjct: 25  CSHNRCVYCDMYRDKRFRPKDWGQVEADIIEAGAMGRRPGRRGFRSTKVFLCD---GDAL 81

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLE 141
           ++  + +  IL  I ++      V    +        V      R+AG+  +  G+++ +
Sbjct: 82  ILPTRRLLQILAAIREHLPWVERVGSYGDTRSVGRKSVEELTALREAGLGIVYHGMETGD 141

Query: 142 EQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + +     E I       A  +   +   L       +        Q       
Sbjct: 142 AEVLERIDKGGTRPELIETADKLRAAGVQHSVIVLLGIGGVGLSEQHARSTAQALTRMDP 201

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
            ++     T+  GT  + M   G+  LPS+   ++      +            S  S  
Sbjct: 202 PYVGALTTTVVPGTPLFDMQSAGEFELPSKFRMLEELRTIVAE-----------SEFSNC 250

Query: 260 GAESLHNLNY 269
              S H  NY
Sbjct: 251 RFSSNHASNY 260


>gi|170741815|ref|YP_001770470.1| MiaB-like tRNA modifying enzyme [Methylobacterium sp. 4-46]
 gi|168196089|gb|ACA18036.1| MiaB-like tRNA modifying enzyme [Methylobacterium sp. 4-46]
          Length = 423

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 66/208 (31%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C  +C +C     V  +  G    +      +   R L     +  I   G   +     
Sbjct: 152 CDHRCTFC-----VIPFGRGPSRSLP-VAAAIAQARDLVED-GVREIVLTGIDLTAYGRD 204

Query: 86  -----------PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
                         +  + D      +   +VE   +   +              + ++ 
Sbjct: 205 LGAGTGLGGLVKALLRALPDLARLRLSSIDSVEADADLLDALATEPRL-------MPQLH 257

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +Q+ ++  L+ + R H  ++A+A     R + P +    DLI   P +T  Q+   L 
Sbjct: 258 LSLQAGDDLVLKRMRRRHTRADAVAFCETVRRLRPEIVLGADLIAGFPTETEAQFARSLA 317

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                 +  L ++  +    T   +M +
Sbjct: 318 LVEECGLTQLHVFPYSPRPETPAARMPQ 345


>gi|158521753|ref|YP_001529623.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158510579|gb|ABW67546.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 521

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 80/236 (33%), Gaps = 19/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   CP+C   S++   K  +    ++ L E+     L     I  + +     +    +
Sbjct: 237 CPFGCPFCS--SYLHWGKRFRTRSAENVLAEI---AHLKSRYDIQELKWQDDNLTADRKR 291

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A+    + +  T+  N    I     +++       +++G  +I+L V+S +  +   
Sbjct: 292 AMAIFRGMVDRGLTMPWNTPNGIAL--WTIDDELMGLMKQSGCYQITLAVESGDPDTFAA 349

Query: 148 -LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + +  +   A     LA+          I   P +T+ Q +  ++  L   VD+L  + 
Sbjct: 350 YVKKPFSLDRAREVARLAKKHGISTVAYFIIGFPGETLEQVQRSMRFGLDLGVDYLVPFV 409

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
                G+         DL            +        +  H   ++  +F   E
Sbjct: 410 FNPLPGS---------DLWRTCVESGRITEDYAYE--KGNHYHQARLNVAAFDARE 454


>gi|78048194|ref|YP_364369.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|123757453|sp|Q3BS94|MIAB_XANC5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78036624|emb|CAJ24315.1| 2-methylthioadenine synthetase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 484

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGTPS 82
           C  YC F      R +     F    +   Q   Q       L    +     +G     
Sbjct: 190 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGD 249

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++ L++  IA+   +      T  ++P     +    YR      N + L VQ+ 
Sbjct: 250 AAQYADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 307

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 308 SDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 367

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 368 FDQSFSFVYSRRPGTP 383


>gi|332530355|ref|ZP_08406300.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Hylemonella
           gracilis ATCC 19624]
 gi|332040166|gb|EGI76547.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Hylemonella
           gracilis ATCC 19624]
          Length = 463

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 72/246 (29%), Gaps = 17/246 (6%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +++    +     +V     C K C YC       R +                  Q   
Sbjct: 150 DHLPPARTEGASAFVSIMEGCSKYCSYC--VVPYTRGEEVHRPLDDVLTEVAGLAAQGVK 207

Query: 68  PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK 127
             ++            ++   +  ++  +     +         ++P        + Y +
Sbjct: 208 EITLLGQNVNAWVKDGLDFAGLIELVSEMPGIERIRYTT-----SHPKEFTPRLIEAYAR 262

Query: 128 AG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQT 183
               V+ + L VQ   ++ L  + R + A E  + +   R   P ++   DLI   P +T
Sbjct: 263 IPKLVSHLHLPVQHGSDRILMAMKRGYTALEYKSTVRKLRAARPDLALATDLIVGFPGET 322

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                  L+       D+   +  +   GT    +  D        +V +      Q++ 
Sbjct: 323 EDDHAKTLKLIEDMEFDNSFSFIYSPRPGTPAANLQDD-----TPHDVKLRRLQEVQALI 377

Query: 244 SAHGLH 249
             +   
Sbjct: 378 EGNMRR 383


>gi|221124262|ref|XP_002159653.1| PREDICTED: similar to CDK5 regulatory subunit associated protein 1
           [Hydra magnipapillata]
 gi|260220064|emb|CBA27228.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 445

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 19/228 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                 +  L E+  +    G + ++ +      +      
Sbjct: 155 CSKYCSYC---VVPYTRGTEINRPFEDVLVEIAGLADQ-GVKEVNLLGQNVNAWRNAMGD 210

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + A +L+ ++    +      T  ++P+    +    Y K    V+ + L VQ  
Sbjct: 211 SGEMADFATLLEYVSDIPGIERIRYTT--SHPNEFTPSLIAAYEKLPKLVSHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I    A      +S D I   P +T       ++      
Sbjct: 269 SDKILMAMKRGYTAMEYKSTIRKLRAIRPDMSISSDFIVGFPGETDEDHAKMMKLIHDIG 328

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            D+   +  +   GT    +H D     P E     L  L  +I +  
Sbjct: 329 FDNSFSFIFSPRPGTPAANLHDDT----PHEVKLARLQELQAAINANI 372


>gi|148700454|gb|EDL32401.1| CDK5 regulatory subunit associated protein 1-like 1, isoform CRA_a
           [Mus musculus]
          Length = 444

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 28/246 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              L + Q     GT   K  +           A      T+ +  +   H+Y   +H  
Sbjct: 385 FPSLFINQFYPRPGTPAAKAEQVP---------AHVKKQRTKDL--SRVFHSYNPYDHKM 433

Query: 259 LGAESL 264
            G    
Sbjct: 434 SGQPCR 439


>gi|305667336|ref|YP_003863623.1| hypothetical protein FB2170_13853 [Maribacter sp. HTCC2170]
 gi|88709384|gb|EAR01617.1| hypothetical protein FB2170_13853 [Maribacter sp. HTCC2170]
          Length = 437

 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----FFGGGTPSL 83
           C  KC +C   +      + + + + + L     +        + +      FG G    
Sbjct: 151 CDYKCTFC---TIPLARGISRSDTMDNVLKNAAEISSKGIKEIVLTGVNIGDFGKGEFG- 206

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              ++    LD +     V     + I    P+ ++        K+   V    + +QS 
Sbjct: 207 -NKKHEHTFLDLVNALDNVDGVHRLRISSIEPNLLKNETIDFVSKSNSFVPHFHIPLQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ LR + R +     +  +   +++  F  +  D+I   P +T   +           
Sbjct: 266 SDEILRLMKRRYQKELYVDRVKRIKDVMPFACIGVDVIVGFPGETDDHFLETYHFLNELN 325

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           V +L ++  +    T   +M
Sbjct: 326 VSYLHVFTYSERDNTPASEM 345


>gi|325660740|ref|ZP_08149368.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472814|gb|EGC76024.1| TIGR01212 family radical SAM protein [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 308

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 17/227 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS--ISSI-FFGGGTPSLIEPQN 88
           C +C              N  +S   ++   ++    ++  +S I +F   T +  E   
Sbjct: 47  CIFCS----AGGSGDFAGNPRESIRQQIASGKEQIKKKTDAVSYIAYFQAYTNTYAEVSY 102

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-----SLGVQSLEEQ 143
           +  I         V     ++I   P  ++        +   NRI      LG+Q++ +Q
Sbjct: 103 LEKIFTEAISCPEVK---ILSIATRPDCLDDEILTLLARL--NRIKPVWVELGLQTIHKQ 157

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           S +F+ R ++ S    A+   R I   +    I  LP +T    +  +    +  +  + 
Sbjct: 158 SAQFIRRGYSLSVFEKAVRNLRQIGVAVIVHTILYLPGETELMMQETISYLNTMDIQGIK 217

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L  L I  GT     ++     +P+    +       +      +  
Sbjct: 218 LQLLHILHGTDLADYYETSPFFVPTMEEYISFLGKCITQLRPDIVIH 264


>gi|255022191|ref|ZP_05294193.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidithiobacillus caldus ATCC 51756]
 gi|254968373|gb|EET25933.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidithiobacillus caldus ATCC 51756]
          Length = 475

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 17/232 (7%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C +   V   RY+      +   +  +Q               F    P    
Sbjct: 208 CRSQCTFCLWPQTVGGHRYRTRSAANVLEEVRYIQKQFPQVQEIFFDDDTFTDDRP---R 264

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +  E           +  R  G+  + +G +S ++Q L
Sbjct: 265 AEEIARGLGKLGVTWSCNAKANVPYET---------LKVLRDNGLRLLLVGYESGDQQIL 315

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A         +   +    I  LP +T    +  +  A       + + 
Sbjct: 316 NNIKKGLKVEAARKFTKDCHELGITIHGTFILGLPGETRETIQKTINFAKEINPHTIQVS 375

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI--TSAHGLHAYEISN 255
                 GT  Y      +  L  E+ A  + +    I   S   L+  EI +
Sbjct: 376 LAAPYPGTYLYNQ-AKREGWLTDEDEAHLVNDRGVQISPMSYPHLNHTEIFD 426


>gi|144900354|emb|CAM77218.1| B12-binding:Radical SAM [Magnetospirillum gryphiswaldense MSR-1]
          Length = 550

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 16/253 (6%)

Query: 28  CVKKCPYCDFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C        RY +     +   + E++W+    G  SI          + I  
Sbjct: 266 CPYQCTFCSNPVMWTTRYLMRPPAHV---VDEIEWLVNSYGANSIDFADL-----TAIVK 317

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           +   +      K   +  N ++       +++    Q    AG   +    +S  + +L 
Sbjct: 318 KEWVIEFCAELKRRNLHINWQLPSGTRSEALDAETVQIIHDAGCKFLVYAPESGSQDTLD 377

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV---DHLS 203
            + +         ++  A +        +I   P +        +  A    +   D  +
Sbjct: 378 RIKKKIKLPTITRSMAAAVSAGHTTKACMIIGFPHERRKHVFQSMLFAAKLGIIGVDDCN 437

Query: 204 LYQLTIEKGTLFYKMH----KDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           +   T   G+  +       +  +L     N  V  ++    +     +  +EI+ + FL
Sbjct: 438 ISPFTPYPGSELFNELRAEGRIPELDDTYFNSLVTQFDFVTGVAYCRNIPGWEIAIYRFL 497

Query: 260 GAESLHNLNYWRY 272
           G    ++L+Y  Y
Sbjct: 498 GMVIFYSLSYLCY 510


>gi|126322223|ref|XP_001375874.1| PREDICTED: similar to CDK5 regulatory subunit associated protein
           1-like 1 [Monodelphis domestica]
          Length = 595

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +       ++ D+I   P +T   ++  L+    Y 
Sbjct: 325 SDSVLMEMKREYCVADFKRVVDFLKEKVPGLTIATDIICGFPGETDQDFQDTLKLVEDYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   K+ +     +P+        +L+Q   S +    
Sbjct: 385 FPSLFINQFYPRPGTPAAKIQQ-----VPAHVKKQRTKDLSQLFHSYNPYDH 431


>gi|317506460|ref|ZP_07964261.1| MiaB family RNA modification enzyme [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255221|gb|EFV14490.1| MiaB family RNA modification enzyme [Segniliparus rugosus ATCC
           BAA-974]
          Length = 519

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 75/232 (32%), Gaps = 19/232 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S   +        I + +  +  + +     ++          S  +P 
Sbjct: 180 CNNTCTFCIVPSLRGKQLDRAPEEIAAEVRAL--VAEGVLEVTLLGQNVNAYGSSFADPA 237

Query: 88  ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                   A +L  + +   +          +P+    +      +       + + +QS
Sbjct: 238 LARDRGAFAKLLRSMGEIEGLERVRF--TSPHPAEFTEDVVLAMAETPNVCPHLHMPLQS 295

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R++ +++ +  +   R + P   ++ D+I   P +T   ++  L+     
Sbjct: 296 GSDRILKAMRRSYRSAKFLGIVRRVRELLPDAAITTDIIVGFPGETEEDFQQTLEVVAEA 355

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                  +Q +   GT   ++         ++ V  + Y     +     L 
Sbjct: 356 RFASAYTFQYSKRPGTPAAELPDQ-----VAKEVVAERYQRLVDLQERICLE 402


>gi|313676026|ref|YP_004054022.1| SSU ribosomal protein s12p methylthiotransferase [Marivirga
           tractuosa DSM 4126]
 gi|312942724|gb|ADR21914.1| SSU ribosomal protein S12P methylthiotransferase [Marivirga
           tractuosa DSM 4126]
          Length = 436

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 74/221 (33%), Gaps = 16/221 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----FFGGGTPSL 83
           C + C +C                I+  + E + M +  G + I  I     + G    +
Sbjct: 151 CDRPCSFCA---IPIMRGKHVSRPIEELVKEAKNMAR-NGTKEILLIAQDSTYYGLD--I 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
            + +N+A +L  ++    +         A P+    +       R    N + + +Q   
Sbjct: 205 YKKRNLAELLRQLSDVEGIEWIRLHY--AFPTGFPEDILDVMAERDNICNYLDMPLQHGS 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R     +  A I   R   P ++    LI   P +T   ++  +        
Sbjct: 263 TKMLKMMRRGTTHEKQAALIKRIREKVPGIALRTTLIAGHPGETEEDFQEMMDFVRDTRF 322

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
           D L ++  + E+ T  Y    D    +  E     +   TQ
Sbjct: 323 DRLGIFPYSHEENTHAYSFEDDVPEEIKQERADAVMELQTQ 363


>gi|21108720|gb|AAM37312.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 452

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGTPS 82
           C  YC F      R +     F    +   Q   Q       L    +     +G     
Sbjct: 158 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAGD 217

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             +  ++ L++  IA+   +      T  ++P     +    YR      N + L VQ+ 
Sbjct: 218 AAQYADLGLLIRTIAQIEGIGRIRFTT--SHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 275

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 276 SDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 335

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 336 FDQSFSFVYSRRPGTP 351


>gi|21228284|ref|NP_634206.1| hypothetical protein MM_2182 [Methanosarcina mazei Go1]
 gi|20906744|gb|AAM31878.1| hypothetical protein MM_2182 [Methanosarcina mazei Go1]
          Length = 435

 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 68/214 (31%), Gaps = 28/214 (13%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSI---SSI 74
           +H       C   C YC     V+  +    +F  +  + +++      G R I   S  
Sbjct: 147 IHICQISQGCNFACSYC----IVKHARGKLLSFPPEEIIEDIRS-AVADGCREIWLTSQD 201

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP------SSVEVNNFQGYRKA 128
               G  + ++   +   +  I  ++ V   +       P       + + +        
Sbjct: 202 DSQYGMDTGVKLPELLRAISEIPGDFKVRVGMMNPFSVLPILDDLVDAFDSDKIFKL--- 258

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               + L +QS     L+ + R H        I   R  F  +S   D+I     +T   
Sbjct: 259 ----LHLPIQSASHSVLKKMNRLHKMDSVDEIITKFRAHFEDLSLFTDIIVGFCDETDED 314

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +E  ++    Y  + +++ + +    T  +    
Sbjct: 315 FEETIEWVKKYRPEKINISRYSPRPHTKAFSFRN 348


>gi|328952365|ref|YP_004369699.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328452689|gb|AEB08518.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 624

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 83/238 (34%), Gaps = 13/238 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +   +  + N +   + E++           + IFF     +    +
Sbjct: 192 CPFGCRFCS--VILLFGRQFRYNSVDRIMAEIKQ-----NGTQANHIFFCDDNFTADRNR 244

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              L+   IA+N  +  + ++ +EA     +        ++G   + +G++S+   +L+ 
Sbjct: 245 CKELLERIIAENLKIEWSAQVRVEAA---KDPELLSLMARSGCFLVYIGLESINPATLKS 301

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +     +    +    +   ++    I+   + T+      +  +    VD L    L
Sbjct: 302 YKKAQTVEDIRYCVDTFHDHGIKVHGMFIFGSEEDTIQVLRDTVGFSQEIDVDSLQYLIL 361

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
           T   GT  Y   +  D +L  +      Y+   ++     +  YE+   +    +  +
Sbjct: 362 TPIPGTPIYDELQSQDRLLHHD---WQYYDGHHAVFVPRYMTPYELQMETLRAMKHFY 416


>gi|213962512|ref|ZP_03390774.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
 gi|213954838|gb|EEB66158.1| conserved hypothetical protein [Capnocytophaga sputigena Capno]
          Length = 435

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 68/195 (34%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + I++ L+  + +        + + +  G    G   +
Sbjct: 151 CDYKCTYC---TIPMARGISRSDTIENILSNAKKISDKGIKEIVLTGVNIGDYGKGEFGN 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                    ++  + K   +      +IE  P+ ++          K+ V    + +QS 
Sbjct: 208 KKHEHTFLELVQALDKVEGIERLRISSIE--PNLIKDETIDFIAQSKSFVPHFHIPLQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     ++ +   R + P   +  D+I   P +T   +           
Sbjct: 266 SNEILKKMKRRYLRELYVSRVAKIREVMPDACIGVDVIVGFPGETDEHFLETYHFLNELD 325

Query: 199 VDHLSLYQLTIEKGT 213
           + +L ++  +    T
Sbjct: 326 ISYLHVFTYSERDNT 340


>gi|58584621|ref|YP_198194.1| 2-methylthioadenine synthetase [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418937|gb|AAW70952.1| 2-methylthioadenine synthetase [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 448

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 68/203 (33%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQ-------LTGPRSISSIFFGGG 79
           C K C +C                +     E ++ +         L    +     + G 
Sbjct: 163 CDKFCTFC---VVPYTRGAEYSRPVNEIFREALKLVANGAKEINLLGQNVNAYHGEYEGE 219

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                   ++  ++  IAK   +      T  ++P  +  + +  + +A   +  I L V
Sbjct: 220 V------WDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLAHAEAPKLMPFIHLPV 271

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + LR + R +   E +  I   R + P++  S D I   P +T   +E  ++   
Sbjct: 272 QSGSNKILRAMNRKYTTEEYLEIIERFRKLKPKIEFSSDFIVGFPGETEKDFEGTIKLVE 331

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
                    ++ +   GT   + 
Sbjct: 332 RVRYAQAYSFKYSTRPGTPGAER 354


>gi|254821762|ref|ZP_05226763.1| hypothetical protein MintA_17652 [Mycobacterium intracellulare ATCC
           13950]
          Length = 394

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 74/223 (33%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           V R        + S +
Sbjct: 137 LQEFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRG--KEVDRSPDDILAEVASLV 194

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPS 115
            +      L G +++++       P+L  P++       +     +     +     +P+
Sbjct: 195 DDGVLEVTLLG-QNVNAYGVSFADPAL--PRDRGAFARLLRACGDIDGLERVRFTSPHPA 251

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P   +
Sbjct: 252 EFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVRAAMPHAAI 311

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           + DLI   P +T   +   L             +Q +   GT 
Sbjct: 312 TTDLIVGFPGETEEDFAATLDVVRRARFSAAFTFQYSKRPGTP 354


>gi|149196637|ref|ZP_01873691.1| hypothetical protein LNTAR_09104 [Lentisphaera araneosa HTCC2155]
 gi|149140317|gb|EDM28716.1| hypothetical protein LNTAR_09104 [Lentisphaera araneosa HTCC2155]
          Length = 469

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 72/239 (30%), Gaps = 16/239 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C            +   I+S + E Q +        I       G  S ++  
Sbjct: 162 CNHKCSFCA---IPTFRGKLRSRTIESIVKEAQALLNRGVREIILVSQDSTGYGSDLKDG 218

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +    L                +   P++V     + +   K     I + +Q   ++ L
Sbjct: 219 SSTAELLKALDKLDCDEYWVRLLYLYPTTVTDELIETFAQSKHIAKYIDMPLQHGADKVL 278

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R          +   R   P +     L+   P +   +++  L        D L 
Sbjct: 279 KTMRRGITRKRTEILLDKFRKAMPGVVMRTTLLVGHPGEGEEEFQECLDFVKEQQFDRLG 338

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
           ++  + E+ T    +    D   P  + A         I +     +YE  N  F G +
Sbjct: 339 VFTYSHEENTHARSLEDFTD---PETSAARR-----DQIMAVQQEISYE-KNQRFAGQD 388


>gi|308063131|gb|ADO05018.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori Sat464]
          Length = 437

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC      R         +   L E + +    G + +     ++   G   S 
Sbjct: 148 CDKKCAYC---IVPRTRGKEISIPMDLILKEAEKLAS-NGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SNAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|87125523|ref|ZP_01081368.1| hypothetical protein RS9917_02081 [Synechococcus sp. RS9917]
 gi|86166823|gb|EAQ68085.1| hypothetical protein RS9917_02081 [Synechococcus sp. RS9917]
          Length = 465

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 58/203 (28%), Gaps = 11/203 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-----LTGPRSISSIFFGGGTPS 82
           C ++C YC   S   + +      I+  +  +          L            G TP 
Sbjct: 172 CNERCTYCVVPSVRGKEQSRLPAAIRLEMEGLAAQGFKEITLLGQNIDAYGRDLPGITPE 231

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  +     +      T  ++P            +         +  QS 
Sbjct: 232 GRRQHTLTDLLQFVHDVEGLERIRFAT--SHPRYFTERLIDACAELPKVCEHFHIPFQSG 289

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
           ++  L+ + R +        I   R   P   +S D+I A P +T  Q+   L    +  
Sbjct: 290 DDAVLKAMARGYTVDRYRRIIDRIRERMPDAAISADVIVAFPGETAAQYRRTLDLIEAIG 349

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
            D ++    +    T        
Sbjct: 350 FDQVNTAAYSPRPNTPAADWPDQ 372


>gi|25011513|ref|NP_735908.1| hypothetical protein gbs1471 [Streptococcus agalactiae NEM316]
 gi|76787125|ref|YP_330042.1| radical SAM family protein [Streptococcus agalactiae A909]
 gi|77405770|ref|ZP_00782855.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           H36B]
 gi|24413052|emb|CAD47130.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76562182|gb|ABA44766.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           A909]
 gi|77175627|gb|EAO78411.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           H36B]
          Length = 311

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HAKLEI 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       + I I   P  +         +        + LG+Q+  E +   +
Sbjct: 100 IKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R + P++     LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +   T   + + +G L L S+    D  ++          H   I  H   G    H
Sbjct: 220 LLHLMTNTRMQRDYHEGRLRLLSQE---DYISIICDQLEIIPKH---IVIHRITGDAPRH 273

Query: 266 NL 267
            L
Sbjct: 274 ML 275


>gi|320159796|ref|YP_004173020.1| hypothetical protein ANT_03860 [Anaerolinea thermophila UNI-1]
 gi|319993649|dbj|BAJ62420.1| hypothetical protein ANT_03860 [Anaerolinea thermophila UNI-1]
          Length = 444

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C + C +C          + +   +      +    ++     +  +       +     
Sbjct: 159 CRRPCAFCA-------IPLIKGTAVSRPPEVILQEARILQDEGVKELLLIAQDTTDYGHD 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L     +A +L+GI +       + I   A P  V     +        V  + + +Q  
Sbjct: 212 LGMKDGLATLLEGILREAPEIPWIRILY-AYPGYVTDRLIEVMANHPQIVPYLDMPLQHA 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
             Q+LR + R  N       +   R   P ++     I   P +T  +++  L       
Sbjct: 271 HPQTLRRMRRPSNMEWVYQTLAKMRAAIPNLALRTTFIVGYPGETEEEFQTLLDFVQEIQ 330

Query: 199 VDHLSLYQLTIEKGT 213
            DH+ ++  + EKGT
Sbjct: 331 FDHVGIFTFSFEKGT 345


>gi|291538375|emb|CBL11486.1| iron-only hydrogenase maturation protein HydE [Roseburia
           intestinalis XB6B4]
          Length = 367

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 71/226 (31%), Gaps = 30/226 (13%)

Query: 4   LSAYENNMTGQGSNSLG--VYVH--WPF---CVKKCPYCDF---NSHVRRYKVGQENFIQ 53
           +   +      G    G  VY+     F   C   C YC     N H  RY++ +E  + 
Sbjct: 53  IQDLKQRARNTGDRIYGKNVYIRGLIEFTNYCKNDCLYCGIRRSNCHADRYRLTEEEILS 112

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
                     ++       +    GG       + I  I+  I   +      +  +  +
Sbjct: 113 CC--------KIGYELGFCTFVLQGGEDGFYTDEKICQIVSKIKAEYP-----DCAVTLS 159

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI----AAIHLARNIFP 169
                  ++Q Y  AG +R  L  ++ +E   + L   H A  +       +   + I  
Sbjct: 160 IGEKSRESYQAYFDAGADRYLLRHETADEAHYKKL---HPAEMSYQNRMRCLRDLKEIGY 216

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +     +   P QT+     +LQ         + +     +K T F
Sbjct: 217 QTGCGFMVGSPYQTVDTLWEDLQFIRRLKPQMVGIGPFIPQKDTPF 262


>gi|153953242|ref|YP_001394007.1| biotin synthase [Clostridium kluyveri DSM 555]
 gi|146346123|gb|EDK32659.1| HydE [Clostridium kluyveri DSM 555]
          Length = 347

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 68/191 (35%), Gaps = 18/191 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N ++ RY++  ++ I+        + +        +I    G     
Sbjct: 64  CKRNCMYCGLRCDNKNIERYRISPDDIIE--------LAKKAEGYGYKTIVMQSGEDDYY 115

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  I+  I K       +++ +  +        ++ +++AG +R  + +++ +E+ 
Sbjct: 116 TVDKLKYIISNIKK-------MDMALTLSIGEKTFEEYKSFKEAGADRYLIRIETTDEKL 168

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + +  + +       +   + +   +    +  LP Q++     ++        D + +
Sbjct: 169 YKKMHPDMSYKNRKRCLRELKILGYEVGTGCLIGLPNQSVESLAEDILFFKEIDADMIGI 228

Query: 205 YQLTIEKGTLF 215
                 + T  
Sbjct: 229 GPFIPNEDTPL 239


>gi|22537548|ref|NP_688399.1| hypothetical protein SAG1401 [Streptococcus agalactiae 2603V/R]
 gi|76797667|ref|ZP_00779936.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           18RS21]
 gi|22534430|gb|AAN00272.1|AE014256_4 conserved hypothetical protein TIGR01212 [Streptococcus agalactiae
           2603V/R]
 gi|76586961|gb|EAO63450.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           18RS21]
          Length = 311

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HAKLEI 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       + I I   P  +         +        + LG+Q+  E +   +
Sbjct: 100 IKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R + P++     LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +   T   + + +G L L S+    D  ++          H   I  H   G    H
Sbjct: 220 LLHLMTNTRMQRDYHEGRLRLLSQE---DYISIICDQLEIIPKH---IVIHRITGDAPRH 273

Query: 266 NL 267
            L
Sbjct: 274 ML 275


>gi|330466440|ref|YP_004404183.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Verrucosispora
           maris AB-18-032]
 gi|328809411|gb|AEB43583.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Verrucosispora
           maris AB-18-032]
          Length = 491

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 8/142 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P     +      +     + + + +QS  +  LR + R++ A   +  I    A 
Sbjct: 233 TSPHPKDFTDDVIAAMAETPNVCHSLHMPLQSGSDDVLRAMRRSYRAERYLGIIDKVRAA 292

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                ++ D+I   P +T   +E  L    +        +Q +   GT    M    D  
Sbjct: 293 MPDAAITTDIIVGFPGETEADFERTLDVVRAARFSSAFTFQYSKRPGTPAATM----DGQ 348

Query: 226 LPSENVAVDLYNLTQSITSAHG 247
           LP + V      L   +     
Sbjct: 349 LPKQVVQERYERLIACVEEITW 370


>gi|298481832|ref|ZP_07000022.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
           [Bacteroides sp. D22]
 gi|298272054|gb|EFI13625.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
           [Bacteroides sp. D22]
          Length = 804

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   + +      E     +    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YKTKADIYDLLPAEECLRQAKYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D + +    SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVRQMRRHSS---IQLCASLGLLNEEELRSLYEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   +  A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCTTHTQEQKRATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLKELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENERP 308


>gi|289671358|ref|ZP_06492433.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 484

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K C +C       R +     F    +   Q  
Sbjct: 166 IEKFDRLPEPRADGP-SAFVSIMEGCSKYCSFC--VVPYTRGEEVSRPFEDVLVEVAQLA 222

Query: 63  RQLTGPRSISSI------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            Q  G R I+ +      + G       +    A +   I     +     I     +P 
Sbjct: 223 AQ--GVREINLLGQNVNAYRGAYGADAGDAAQYADLGLLIRTIAQIDGIGRIRFTTSHPL 280

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
               +    YR      N + L VQ+  ++ L  + R + A E  + I   R + P +S 
Sbjct: 281 EFSDSLVDAYRDVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISI 340

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             D I   P +T   +E  ++       D    +  +   GT 
Sbjct: 341 SSDFIVGFPGETEADFEKTMKLIEDVGFDQSFSFVYSRRPGTP 383


>gi|260427313|ref|ZP_05781292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
 gi|260421805|gb|EEX15056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
          Length = 435

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 73/204 (35%), Gaps = 19/204 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSL 83
           C K   +C F                  LTE + + +  G R I+    ++    G    
Sbjct: 159 CDK---FCAFCVVPYTRGAEVSRPADRVLTEARDLVER-GVREITLLGQNVNAYHG---- 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              + +A ++  +A    +      T  ++P+ ++      +      +  + L VQ+  
Sbjct: 211 -HDRGLAGLIRELAAIDGLERIRFTT--SHPNDMDDALIAAHGDCEKLMPYLHLPVQAGS 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R+H A   +  +   R   P   +S D I   P++T   ++  L    +   
Sbjct: 268 DRILKRMNRHHTAEAYLKLVERLRAARPDLHLSGDFIVGFPEETEEDFQATLDLVEAVQY 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
                ++ +   GT   +  +  +
Sbjct: 328 GSAFSFKYSERPGTPAAERPQVPE 351


>gi|167749643|ref|ZP_02421770.1| hypothetical protein EUBSIR_00601 [Eubacterium siraeum DSM 15702]
 gi|167657396|gb|EDS01526.1| hypothetical protein EUBSIR_00601 [Eubacterium siraeum DSM 15702]
          Length = 355

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 17/198 (8%)

Query: 27  FCVKKCPYCD--F-NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N    RY++ +E  +    T  +      G R+   +  GG  P  
Sbjct: 66  YCKNDCYYCGIRCSNKQAERYRLSKEQILDCCKTGYEL-----GFRTF--VLQGGEDP-Y 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+  I +++      +  +  +       +++ Y ++G +R  L  ++ + +
Sbjct: 118 YSDDMICDIVCSIKRDFP-----DCAVTLSIGEKSEESYRRYFESGADRYLLRHETADYE 172

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L     +A      +   + I  +     +   P QT      ++        + +
Sbjct: 173 HYSKLHPPGLSAKHRQDCLRTLKKIGYQTGAGFMVGSPYQTAENLADDMLFLEELKPEMV 232

Query: 203 SLYQLTIEKGTLFYKMHK 220
            +        T F    +
Sbjct: 233 GIGPFIPHHATPFADKPQ 250


>gi|149045299|gb|EDL98385.1| CDK5 regulatory subunit associated protein 1-like 1 (predicted),
           isoform CRA_b [Rattus norvegicus]
          Length = 442

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 80/246 (32%), Gaps = 28/246 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              L + Q     GT   K        +P+        +L++        H+Y   +H  
Sbjct: 385 FPSLFINQFYPRPGTPAAKA-----KQVPAHVKKQRTKDLSR------VFHSYNPYDHKM 433

Query: 259 LGAESL 264
            G    
Sbjct: 434 SGQPCR 439


>gi|317154682|ref|YP_004122730.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944933|gb|ADU63984.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 443

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 19/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C   C +C   +        +   +++ L E + +           I  G  + S     
Sbjct: 156 CSHNCHFC---TIPSIRGPHRSRPVEALLDEARTLAASVP----EIIIVGQDSTSYGSDL 208

Query: 86  --PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSL 140
                I  ++ G+A    ++    + +   P+ +  +     +  G   +    + +Q  
Sbjct: 209 GGDNTIKHLVSGLADLPGLAWLRLMYL--YPAGLTDDLLGFLKSIGDPLLPYFDIPLQHA 266

Query: 141 EEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
               L  +GR    N  + I  +  A      +    I   P +T   ++  ++      
Sbjct: 267 HPDVLASMGRPFARNPRKVIDRVR-AHFSDAALRTTFIVGYPGETDEHFDHLMRFVEETR 325

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
             HL ++    E GT    +    D
Sbjct: 326 FHHLGVFPYWPEDGTPAAALPDPVD 350


>gi|261879949|ref|ZP_06006376.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333372|gb|EFA44158.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 445

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 10/190 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +        G R I       G       +
Sbjct: 163 CSYFCTYC---TIPFARGRSRNPSIASLVAQ-AEEAAAEGGREIVLTGVNIGDFGRTTGE 218

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  + +   +      ++E  P  ++          +A +    + +QS  ++ L
Sbjct: 219 RFIDLVKALDRVEGIQRYRISSLE--PDLLDDELIDYCAHSRAFMPHFHIPLQSGSDEVL 276

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+++ +     IHL +   P   +  D++     +    +E       +  V  L 
Sbjct: 277 TLMRRHYDTALFARKIHLIKQKMPDAFIGVDVMVGCRGEKPEYFEDSYNFLNALPVSQLH 336

Query: 204 LYQLTIEKGT 213
           ++  +   GT
Sbjct: 337 VFPYSERPGT 346


>gi|313157989|gb|EFR57395.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alistipes sp. HGB5]
          Length = 445

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     V  Y  G+E       T +  +R L G         G    S     
Sbjct: 163 CNNFCSYC-----VVPYTRGRERSRDP-ETILAEVRTLFGNGYREVTLLGQNVNSYRFGE 216

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +   ++  +A    +      T  ++P  +  +  +   +       I L  QS     
Sbjct: 217 VDFPGLMRRVASVSPLLRVRFAT--SHPKDISDSLLEVMAEMPNICRAIHLPAQSGASSM 274

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +     +  +   R   P   ++ DLI     +T  +    L        +  
Sbjct: 275 LARMNRKYTREWYLDRVAAIRRYLPDCAVTTDLIAGFSGETEEEHAATLSLMREVGYEFA 334

Query: 203 SLYQLTIEKGTLFYK 217
            +++ +   GT  +K
Sbjct: 335 YMFKYSERPGTYAHK 349


>gi|326202162|ref|ZP_08192032.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
           2782]
 gi|325987957|gb|EGD48783.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
           2782]
          Length = 477

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 73/243 (30%), Gaps = 25/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +S       + +L           G    S    +
Sbjct: 196 CDNFCSYC-----IVPYVRGRERS-RSLEEIKNEVEKLAVDGCKEITLLGQNVNSYGKDL 249

Query: 85  EPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E       +L  + K   +       + ++P  +        R        + L VQS  
Sbjct: 250 EGDLTFAGLLRELNKIQGIERIRF--MTSHPKDLSEELIYAIRDCEKVCEHLHLPVQSGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +   + +  I   ++  P +  S D+I   P +T   ++  L        
Sbjct: 308 SKVLDEMNRKYTKEQYLKLIEKVKSNIPGIALSTDIIVGFPGETEEDFDETLDVVAKARF 367

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D    +  +   GT   K         P +            +       + EI N  FL
Sbjct: 368 DMAYTFLYSKRTGTPAAK--------NPEQVPESVKKQRFDKLLELQNKISKEI-NDEFL 418

Query: 260 GAE 262
           G E
Sbjct: 419 GKE 421


>gi|227495825|ref|ZP_03926136.1| possible tRNA 2-methylthioadenine synthetase [Actinomyces
           urogenitalis DSM 15434]
 gi|226834647|gb|EEH67030.1| possible tRNA 2-methylthioadenine synthetase [Actinomyces
           urogenitalis DSM 15434]
          Length = 588

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 77/230 (33%), Gaps = 21/230 (9%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +  +  ++   +V     C   C +C            ++      L E++
Sbjct: 172 ESLKVFPSTLPTRRESAYAAWVSIAVGCNNTCTFC---IVPSLRGKQRDRRPGEVLAEIE 228

Query: 61  WMRQL------TGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP 114
            +            ++++S   G G     +    A +L        +          +P
Sbjct: 229 AVAAQGVTEVTLLGQNVNSYGVGFG-----DRGAFAKLLRAAGGVEGIERVRF--TSPHP 281

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           ++   +      +    +  + + +QS  ++ LR + R++ +   +  +   R   P   
Sbjct: 282 AAFTSDVIDAMAETPQVMPSLHMPLQSGSDKVLRAMRRSYRSERFLRILDEVREKIPNAA 341

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           ++ DLI   P +T   ++  L+            ++ +   GT    + +
Sbjct: 342 ITTDLIVGFPGETEEDFQATLEVVEKARFASAFTFEYSPRPGTPAADLPQ 391


>gi|220928416|ref|YP_002505325.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998744|gb|ACL75345.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 442

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSL-RFLGRNHNASEAIAAIH 162
             +E   SSV   + +  +K    +    I  G+++ +E     ++ +N    E   AI 
Sbjct: 156 YIMETRASSVTKESIEILKKYIGEKSRVLIEFGIEAGDEWVRNHWINKNITDEEIKTAIA 215

Query: 163 LARNIFPRMSFDLIYALPK----QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           L      ++S D+I  +P     Q++  +   +  A     D +    L  ++GT+   +
Sbjct: 216 LIHEAGFKVSVDIIIGIPGLTEQQSIDIFRQTVDWADKLLADEIICLPLNRKEGTIQGFL 275

Query: 219 H 219
           +
Sbjct: 276 Y 276


>gi|222055060|ref|YP_002537422.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221564349|gb|ACM20321.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 571

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 3/113 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSLRFLGRNHNASEAI-AAIHLA 164
              E     +   N +   +   +  R  +GVQS + ++L  +GR  +          L 
Sbjct: 255 FHFEIAADLLTDENVELLGRVPRDTFRFEIGVQSRDAETLERVGRKSDLERLFSNVARLR 314

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           ++    +  DL+  LP++ +  +   LQ        H+ +  L + KG    K
Sbjct: 315 QDTHVTIHLDLVAGLPEEDLQGFLHSLQSLFQLNPHHIQVEPLKVLKGAPMRK 367


>gi|310827282|ref|YP_003959639.1| radical SAM domain-containing protein [Eubacterium limosum KIST612]
 gi|308739016|gb|ADO36676.1| radical SAM domain-containing protein [Eubacterium limosum KIST612]
          Length = 578

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 86/257 (33%), Gaps = 22/257 (8%)

Query: 28  CVKKCPYCDFNSHVRRYK-VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C YC  +S +++ + +  E   +     ++          +  + F   T ++   
Sbjct: 191 CPFQCSYC-LSSTLQKVRFLPLERVFRELDFFIRH--------DVKQVKFVDRTFNV--- 238

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
            +I      IA             E     ++    +   KA  G+ +  +G+QS  +++
Sbjct: 239 -DIRRTKAIIAYLVEKKCATNFHFEIAGDLLDDELLEIIAKAPKGLLQFEIGIQSTHDET 297

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R  +  +    +          +  DLI  LPK+T   ++      ++   D L 
Sbjct: 298 LEAITRKTDLKKIRKYVKRLIGFKNCHVHVDLIAGLPKETYAVFKKSFDETIAIEPDMLQ 357

Query: 204 LYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
           L  L + KGT   K            P   V  + +  +  +     +    +  +   G
Sbjct: 358 LGFLKLLKGTKIRKEADKFYYRYASFPPYEVISNDFISSDELMRLKDIEDL-VDRYYNSG 416

Query: 261 AESLHNLNYWRYGDYIG 277
           A  L  L Y       G
Sbjct: 417 AFYLS-LKYIFENQCWG 432


>gi|303239166|ref|ZP_07325695.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
 gi|302593211|gb|EFL62930.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
          Length = 443

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 18/209 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C K C YC     NS V+RY++ ++  +   L              + ++    G    
Sbjct: 155 YCRKNCKYCGIGGKNSEVKRYRMTEDEIMDVVL--------YLKSIGLRTVILQSGEDLY 206

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                I  I+        +     + I  +        ++ ++KAG     L +++    
Sbjct: 207 WSSDKIVSIIK------RIKETTGMRITLSVGEKTFEEYEEFKKAGAENFLLKIETTNRD 260

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + +  + +  E +      + +        I  LP QT+     ++       ++ + 
Sbjct: 261 IFKEIHPDDDFDERLQCSKWLKELGYINGSGNIIGLPGQTIQDIAGDILFFRDMGINMIG 320

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
           +      KG+  Y+ +  GD+ L    VA
Sbjct: 321 IGPFIPAKGSP-YENYPHGDIALTLRTVA 348


>gi|302386329|ref|YP_003822151.1| MiaB-like tRNA modifying enzyme YliG [Clostridium saccharolyticum
           WM1]
 gi|302196957|gb|ADL04528.1| MiaB-like tRNA modifying enzyme YliG [Clostridium saccharolyticum
           WM1]
          Length = 487

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 15/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC            +   ++  + E + + ++     +  +       +L    
Sbjct: 196 CDKHCTYC---IIPSLRGNYRSVPMERLVKEAERLAEMG----VKELILVAQETTLYGLD 248

Query: 88  NIALILDGIAKN--WTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                           +S    I I+   P  +     Q  ++     N + L +Q   +
Sbjct: 249 LYGEKALPKLLKKLCRISGIRWIRIQYCYPEEITDELIQTIKEEEKVCNYLDLPIQHASD 308

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR    ++    +   R   P ++    LI   P +T    E  ++        
Sbjct: 309 RILKRMGRRTTKAQLQEIVEKLRKEIPDIALRTTLISGFPGETQEDHEELMEFVDEMEFQ 368

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L ++  + E+ T   +      L    E     +  L Q I
Sbjct: 369 RLGVFVYSAEEDTPAAEFPDQV-LQEVKEERRDAIMELQQEI 409


>gi|52081091|ref|YP_079882.1| hypothetical protein BL02101 [Bacillus licheniformis ATCC 14580]
 gi|52786470|ref|YP_092299.1| YqeV [Bacillus licheniformis ATCC 14580]
 gi|319644951|ref|ZP_07999184.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2]
 gi|52004302|gb|AAU24244.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|52348972|gb|AAU41606.1| YqeV [Bacillus licheniformis ATCC 14580]
 gi|317392760|gb|EFV73554.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2]
          Length = 451

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 72/233 (30%), Gaps = 11/233 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLLRSRDPEEVIRQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A +L  +         + I+     S +     +   ++   V  + + +QS     L
Sbjct: 210 NFAQLLKELDSRVKGLKRIRIS-SIEASQITDEVIEVLDRSDKIVRHLHIPLQSGSNSVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +   +       ++ D+I   P +T  ++         +    L 
Sbjct: 269 KRMRRKYTMEFFADRLTKLKKALPGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSELH 328

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S +     EI
Sbjct: 329 VFPYSKRTGTPAARMDGQVDENVKNERVHKLIALSDQLAKEYASDYEGDVLEI 381


>gi|46579310|ref|YP_010118.1| RNA modification protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448724|gb|AAS95377.1| RNA modification enzyme, MiaB-family [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233137|gb|ADP85991.1| RNA modification enzyme, MiaB family [Desulfovibrio vulgaris RCH1]
          Length = 458

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 34/235 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC            +       + E++ +    G R +          S +  +
Sbjct: 173 CSHRCTYC---IVPLTRGASRSREPGEVVAELRRLLD-AGFREVML--------SGVNLR 220

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ------------GYRKAGVNRI-- 133
                L G    W +   VE   E  P        +                 G +R+  
Sbjct: 221 LYGRDLSGAGDFWDLLQRVER--ELAPEWAGRARLRISSLEPGQLGVHALDVLGGSRLVC 278

Query: 134 ---SLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQW 187
               L +QS     LR +GR H + +  +  +      +P      D++   P ++   +
Sbjct: 279 PQLHLSLQSGSPDVLRRMGRGHYSPAPLLDFLRDLGGTWPVFGLGADILMGFPGESEDAF 338

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              L    +  + +  ++  +   GT+   + +     +     A     + Q  
Sbjct: 339 AETLDFVRALPLTYAHVFPYSRRPGTVAASLPEHLPQEIRKARAAAVRDVVAQKR 393


>gi|329911495|ref|ZP_08275546.1| tRNA-i(6)A37 methylthiotransferase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545867|gb|EGF30978.1| tRNA-i(6)A37 methylthiotransferase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 306

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC       R +     F            Q     ++   ++    G  +  E
Sbjct: 7   CSKYCSYC--VVPYTRGEEVSRRFDDVLAEVAGLAAQGVKEITLLGQNVNAFRGVMADGE 64

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + AL+++ IA+   +     +T  ++P          Y K    V+ + L  Q   ++
Sbjct: 65  IADFALLIEFIAEIDGIERIRFVT--SHPKEFSQRLIDAYAKVPKLVDHLYLPAQHGSDR 122

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A E  + I   R + P ++   D I   P +T   +E  ++       D+
Sbjct: 123 VLMAMKRGYTALEYKSIIRRLRAVRPNIAISSDFIVGFPGETEADFEAMMKLIDDIGYDN 182

Query: 202 LSLYQLTIEKGTL 214
              +  +   GT 
Sbjct: 183 SFSFIFSPRPGTP 195


>gi|237715082|ref|ZP_04545563.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. D1]
 gi|262408969|ref|ZP_06085514.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294647695|ref|ZP_06725258.1| adenosylmethionine-8-amino-7-oxononanoate transaminase [Bacteroides
           ovatus SD CC 2a]
 gi|294809972|ref|ZP_06768646.1| adenosylmethionine-8-amino-7-oxononanoate transaminase [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229444915|gb|EEO50706.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. D1]
 gi|262353180|gb|EEZ02275.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636963|gb|EFF55418.1| adenosylmethionine-8-amino-7-oxononanoate transaminase [Bacteroides
           ovatus SD CC 2a]
 gi|294442818|gb|EFG11611.1| adenosylmethionine-8-amino-7-oxononanoate transaminase [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 804

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   + +      E     +    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YKTKADIYDLLPAEECLRQAKYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D + +    SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVRQMRRHSS---IQLCASLGLLNEEELRSLYEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   +  A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCTTHTQEQKRATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLKELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENEQP 308


>gi|219853877|ref|YP_002470999.1| hypothetical protein CKR_0534 [Clostridium kluyveri NBRC 12016]
 gi|219567601|dbj|BAH05585.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 356

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 68/191 (35%), Gaps = 18/191 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N ++ RY++  ++ I+        + +        +I    G     
Sbjct: 73  CKRNCMYCGLRCDNKNIERYRISPDDIIE--------LAKKAEGYGYKTIVMQSGEDDYY 124

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  I+  I K       +++ +  +        ++ +++AG +R  + +++ +E+ 
Sbjct: 125 TVDKLKYIISNIKK-------MDMALTLSIGEKTFEEYKSFKEAGADRYLIRIETTDEKL 177

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + +  + +       +   + +   +    +  LP Q++     ++        D + +
Sbjct: 178 YKKMHPDMSYKNRKRCLRELKILGYEVGTGCLIGLPNQSVESLAEDILFFKEIDADMIGI 237

Query: 205 YQLTIEKGTLF 215
                 + T  
Sbjct: 238 GPFIPNEDTPL 248


>gi|78223499|ref|YP_385246.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
           metallireducens GS-15]
 gi|123756395|sp|Q39TA3|MIAB_GEOMG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78194754|gb|ABB32521.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter metallireducens
           GS-15]
          Length = 441

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 58/196 (29%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTP 81
           C   C YC     +  Y  G+E   +S     +    + G     ++       +G  TP
Sbjct: 158 CDNFCSYC-----IVPYVRGREISRRSVEIIGEIRSAVAGGVREVTLLGQNVNSYGLKTP 212

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
             +    +   +  I     +         ++P  +       + +       I L  Q+
Sbjct: 213 GELSFAGLLREISAIDGLERIR-----FTTSHPKDISPELIACFAELPKLCGHIHLPAQA 267

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             +  L  + R +   E +  +   R   P +    D+I   P +T   +   L      
Sbjct: 268 GSDSILARMNRGYTRQEYLEKVAALRAARPEILITGDIIVGFPGETEADFLQTLSLMEEV 327

Query: 198 AVDHLSLYQLTIEKGT 213
               +  +  +    T
Sbjct: 328 RYTDIFSFAYSPRPET 343


>gi|134299776|ref|YP_001113272.1| MiaB-like tRNA modifying protein YliG [Desulfotomaculum reducens
           MI-1]
 gi|238065335|sp|A4J5U4|RIMO_DESRM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|134052476|gb|ABO50447.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum
           reducens MI-1]
          Length = 444

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 68/235 (28%), Gaps = 29/235 (12%)

Query: 28  CVKKCPYCD-------FNSH-VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +C YC        F S  +   +   ++ ++  + E+  + Q T    +        
Sbjct: 156 CDNRCAYCAIPDIRGKFRSRPIESIEAEVKDLVEKGVREIILIAQDTTRYGLDLYGEYR- 214

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +  +L+ +     +       +   P+       +   +       I L +
Sbjct: 215 ---------LDQLLERLGPIQGLQWIR--LLYCYPNRFTDQLIKAMAENPNICKYIDLPM 263

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q      LR + R     +A   I   R   P +      I   P +T   ++  L    
Sbjct: 264 QHAANDILRAMKRPVTKQQARILIQKLRTEIPGIVIRTSFIVGFPGETEEHFKELLDFME 323

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               D   ++  + E+GT   +M            +  + Y+    +     L  
Sbjct: 324 EVKFDRAGVFTYSQEEGTPAAEMPNQI-----HGRIKQERYHRAMKLQREISLSQ 373


>gi|328955426|ref|YP_004372759.1| RNA modification enzyme, MiaB family [Coriobacterium glomerans PW2]
 gi|328455750|gb|AEB06944.1| RNA modification enzyme, MiaB family [Coriobacterium glomerans PW2]
          Length = 444

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLTGPRSISSIFFGGGTPS--L 83
           C ++C YC     V R +  + +   + +     +          ++ +  G    S   
Sbjct: 148 CNRRCSYC----IVWRARGPERSVPVAAVTGRVRELAAAGVAEVVLTGVNLGAWAGSGRA 203

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSL 140
               +IA +L+ +     ++     +IE  P  V          +       + L +QS 
Sbjct: 204 GGTADIADLLEAVLGETDIARVRLSSIE--PMDVSGRLLAVMAHSSRRVAPYLHLPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYA 198
              +LR +GR ++A +       +R     +  S D+I   P +T  ++E   +      
Sbjct: 262 CSATLRRMGRPYSAQDFAELARRSRRSIAGVALSCDIIAGFPGETDEEFEASFELCARIG 321

Query: 199 VDHLSLYQLTIEKGTL 214
              + +++ +   GT 
Sbjct: 322 FSRMHVFRYSARPGTP 337


>gi|300813542|ref|ZP_07093873.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512290|gb|EFK39459.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 431

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 5/198 (2%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I   + E   +        I +    G     + P 
Sbjct: 155 CNRYCTYC---IIPYARGTIRSRRIGDCVREAIRLANAGYKEIILTGIHVGSYGVDLGPV 211

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +++ IA+   +      ++E N  S +            +   L +QS   + L+ 
Sbjct: 212 RLIDLIEAIAEVDGIERIRLSSVEPNIISEDFMRRAIACSKLCDHFHLSLQSGSNKVLKD 271

Query: 148 LGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R++N  E I    + +   P   ++ D+I   P ++   +E  +          + ++
Sbjct: 272 MNRHYNREEFIEKTKIIKKYMPYAGLTTDIIVGFPGESDEDFEDSMSIVREVEFSKVHVF 331

Query: 206 QLTIEKGTLFYKMHKDGD 223
           + +  K T         D
Sbjct: 332 KYSKRKNTPAADRADQVD 349


>gi|242373881|ref|ZP_04819455.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
 gi|242348435|gb|EES40037.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
          Length = 451

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 76/233 (32%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 156 CNNFCTFC---IIPWARGLMRSRDPEKVVEQASQLVNSGYKEIVLTGIHTGGYGQDLKNY 212

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  + +   +      +IEA+   +     +    +   V  + + +QS  +  L
Sbjct: 213 NLAQLLRDLDEIDGLERIRISSIEAS--QLTDEVIEVIGNSNKVVRHLHVPLQSGSDSVL 270

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 271 KRMRRKYTMEHFSERLTELHKALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHQFSELH 330

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 331 VFPYSPRIGTPAARMDDQIDEGIKNERVHKLITLSNQLAKEYASKFENEVLEV 383


>gi|240171189|ref|ZP_04749848.1| hypothetical protein MkanA1_17891 [Mycobacterium kansasii ATCC
           12478]
          Length = 532

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 22/258 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           + R        +QS +
Sbjct: 155 LQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRG--KEIDRSPADVLAEVQSLV 212

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
                   L G +++++       P+L       A +L    +   +          +P+
Sbjct: 213 DTGVLEITLLG-QNVNAYGVSFADPALPRNRGAFAELLRACGRIPGLERVRF--TSPHPA 269

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  +  LR + R++ A   +  I   R   P   +
Sbjct: 270 EFTDDVIEAMAQTPNVCPALHMPLQSGSDPVLRAMRRSYRADRYLGIIERVRAAMPHAAI 329

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + DLI   P +T   +   L             +Q +   GT       D D  LP +++
Sbjct: 330 TTDLIVGFPGETEEDFAATLDVVRQARFAAAFTFQYSKRPGTPAA----DFDEQLP-KDI 384

Query: 232 AVDLYNLTQSITSAHGLH 249
               Y     +     L 
Sbjct: 385 VRQRYERLIELQEQISLE 402


>gi|118602727|ref|YP_903942.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|229890637|sp|A1AX14|MIAB_RUTMC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|118567666|gb|ABL02471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 444

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 75/216 (34%), Gaps = 19/216 (8%)

Query: 9   NNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG 67
           +++    ++S+  +V     C K C +C       R +     FI         +  + G
Sbjct: 141 DHLPKPKTSSVTAFVSIMEGCSKYCTFC--IVPYTRGEEVSRPFIDVINEV--KILAIQG 196

Query: 68  PRSISSI-----FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN 121
            R ++ +      + G    L++   IA +   I     +     I     +P+    + 
Sbjct: 197 VREVNLLGQNVNAYQG----LMDDGEIADLALLINIAAQIDGIKRIRYTTSHPTQFSDSL 252

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
            + Y +     + + L +QS  ++ LR + R H   E  + I   R I P +S   D I 
Sbjct: 253 IEAYMEVPKLASHLHLPIQSGSDKILRLMKRGHMVIEYKSKIRKLRKIRPDISISSDFII 312

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
             P +    +   +        D    +  +   GT
Sbjct: 313 GFPGENEQDFLDTMTLIDEIGFDKSFSFIYSARPGT 348


>gi|315181901|gb|ADT88814.1| radical SAM domain protein [Vibrio furnissii NCTC 11218]
          Length = 294

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 76/216 (35%), Gaps = 8/216 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C F  +   Y++  +  ++  L   +  R     + I ++   GG P  +    +  
Sbjct: 30  CRFCTFY-YDTPYRIAPKKQVEHDLQ--EAQRVNPNAKRIYAV---GGDPFTLRTAKLVD 83

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           +   I + +   +        +  + +V++ +  +  G+N + +G++S ++  L  + + 
Sbjct: 84  LARMIRRYFPTINIGMYARVDSMFNKDVDDLKQLKAEGINDLVIGIESGDDDVLAQMDKG 143

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           + +++ +                 +  L              Q        H+ +  + +
Sbjct: 144 YTSADILRECQKLEQAGIAYRVIFLGGLAGKGNGERNARHTAQVLNQLHPTHMYMTSVAV 203

Query: 210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
           +  +L Y+   +G  V  SE   ++         + 
Sbjct: 204 QPESLLYQDILEGRFVESSEQERIEETLSLIEQLTN 239


>gi|300814185|ref|ZP_07094466.1| oxygen-independent coproporphyrinogen-III oxidase 2 domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511703|gb|EFK38922.1| oxygen-independent coproporphyrinogen-III oxidase 2 domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 80

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGV 130
            +I+ GGGTPS I  + +  I+D + K++  +   E T+E     +   +  +  ++ GV
Sbjct: 6   KTIYIGGGTPSSIGWKRLEKIIDEVYKDYGFAD--EFTVECGRTDTFSSDLLRMLKEKGV 63

Query: 131 NRISLGVQSLEEQSLR 146
           +RIS+  QS  ++ +R
Sbjct: 64  DRISINPQSFNKEIIR 79


>gi|282883211|ref|ZP_06291810.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
 gi|281297023|gb|EFA89520.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
          Length = 431

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 66/198 (33%), Gaps = 5/198 (2%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC            +   I   + E   +        I +    G     + P 
Sbjct: 155 CNRYCTYC---IIPYARGTIRSRRIGDCVREAIRLANAGYKEIILTGIHVGSYGVDLGPV 211

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +++ IA+   +      ++E N  S +            +   L +QS   + L+ 
Sbjct: 212 RLIDLIEAIAEVDGIERIRLSSVEPNIISEDFMRRAIACSKLCDHFHLSLQSGSNKVLKD 271

Query: 148 LGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R++N  E I    + +   P   ++ D+I   P ++   +E  +          + ++
Sbjct: 272 MNRHYNREEFIEKTKIIKKYMPYAGLTTDIIVGFPGESDEDFEDSMSIVREVEFSKVHVF 331

Query: 206 QLTIEKGTLFYKMHKDGD 223
           + +  K T         D
Sbjct: 332 KYSKRKNTPAADRADQVD 349


>gi|254476913|ref|ZP_05090299.1| MiaB-like tRNA modifying enzyme [Ruegeria sp. R11]
 gi|214031156|gb|EEB71991.1| MiaB-like tRNA modifying enzyme [Ruegeria sp. R11]
          Length = 421

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 23/206 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    + + +  +  +++L        +  G    S    +
Sbjct: 150 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVDQIKRLVDKGFNEVVLTGVDLTSWGADL 203

Query: 85  EP-----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGV 137
                    +  IL  +     +  +   +IE     V+ N  Q        +  + L +
Sbjct: 204 PATPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDENLMQAIATESRLMPHLHLSL 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     A  + P M    D+I   P +T   +E  L+   
Sbjct: 259 QHGDDLILKRMARRHLRDDAIRFTEEASRLRPDMTYGADIIAGFPTETDAHFENSLKLVK 318

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKD 221
              +  L ++  +  +GT   ++   
Sbjct: 319 DCNLTWLHVFPYSKREGTPAARIPNQ 344


>gi|126698292|ref|YP_001087189.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile 630]
 gi|115249729|emb|CAJ67546.1| putative radical SAM domain-containing protein [Clostridium
           difficile]
          Length = 584

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 73/237 (30%), Gaps = 21/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          +    +    L  ++   +      +S I F   T +    +
Sbjct: 186 CPFNCQYC------LSSTIPGLRYFS--LDRIKSDLKALIDARVSQIKFIDRTFNA-NRK 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
               I+D + KN           E     ++    +       G+ +  +GVQS  E++L
Sbjct: 237 VAMEIMDFLMKNDN--GYTTYHFEVTAYLIDDKMLEFLADCKEGLFQFEIGVQSTNEKTL 294

Query: 146 RFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +GR  +  +    +   A         DLI  LP +    +E       +  ++HL L
Sbjct: 295 DAVGRRDDFKKLSHVVQTVASYRNIHQHLDLIAGLPYEDYKSFENSFNDVFNLGIEHLQL 354

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS----AHGLHAYEIS 254
             L + KGT   K    H              + Y   +           L  Y  S
Sbjct: 355 GFLKMIKGTGMRKVADEHGFKYKDYAPYEFLYNNYISYEETLKLKDIEDILERYYNS 411


>gi|34541783|ref|NP_906262.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83]
 gi|34398101|gb|AAQ67161.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83]
          Length = 444

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 63/202 (31%), Gaps = 13/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +  +     +   I+S + + + +    G + I       G       +
Sbjct: 161 CDYHCSYC---TIPKARGRSRNGSIESLVRQAEAVAA-EGGKEIVLTGVNIGDFGRSTGE 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               +L  + +   +      +IE  P+ +          A        + +QS  +  L
Sbjct: 217 TFLDLLRALDQVEGIERYRIGSIE--PNLLSDELIDFCASAHRIAPHFHMPLQSGSDDVL 274

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     +   R   P   +  D+I     +    +  +    L   +    
Sbjct: 275 KLMRRRYDTALFRERVEHIRRALPHAFIGIDVIVGTRGEKPE-FFEDCYSFLQDKISFSR 333

Query: 204 LY--QLTIEKGTLFYKMHKDGD 223
           L+    +   GT   ++    D
Sbjct: 334 LHVFSYSERPGTQALQIPYKVD 355


>gi|317486846|ref|ZP_07945659.1| MiaB family RNA modification enzyme [Bilophila wadsworthia 3_1_6]
 gi|316921901|gb|EFV43174.1| MiaB family RNA modification enzyme [Bilophila wadsworthia 3_1_6]
          Length = 453

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 23/220 (10%)

Query: 8   ENNMTGQGSNSLG--VYVHW-PFCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  +  QG   +    +V+    C   C YC   F +  R+        +      +   
Sbjct: 138 DPALPAQGEGEIPPVAFVNIMQGCDNFCTYCIVPF-TRGRQKSRDAGAILDECRALIDNG 196

Query: 63  RQ---LTGPRSISSIFFGG--GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
            +   L G    S        G  S       A +L  +++   ++    +T   +P  +
Sbjct: 197 AKEITLLGQNVNSYGLDKHASGDTSF------ARLLRKVSELPGLARLRFVT--PHPKDL 248

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSF 173
                  + +      R+ L +Q+  ++ L  + R ++ +  +  +    A      +S 
Sbjct: 249 SPEVIAMFGEVPNLCPRLHLPLQAGSDRVLARMNRKYDMARYMTLVEGLRAARPDIALST 308

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
           DLI   P +T  Q++  L    +        +  +   GT
Sbjct: 309 DLIVGFPGETEEQFQETLDAVRAVNFMSSFSFCYSDRPGT 348


>gi|210615492|ref|ZP_03290619.1| hypothetical protein CLONEX_02835 [Clostridium nexile DSM 1787]
 gi|210150341|gb|EEA81350.1| hypothetical protein CLONEX_02835 [Clostridium nexile DSM 1787]
          Length = 350

 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 17/196 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N++  RY++ +E+ +           +        +    GG    
Sbjct: 66  YCKNDCFYCGIRKSNANTTRYRLTKEDILTCC--------KSGYTLGFRTFVLQGGEDGY 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +  I+  I  ++      +  I  +       ++Q   +AG +R  L  ++ +  
Sbjct: 118 FTDSRLCDIVSSIKSSYP-----DCAITLSVGEKSYESYQALFEAGADRYLLRHETFDSV 172

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + L  +   A      +   + I  ++    +   P QT      +L    S     +
Sbjct: 173 HYQKLHPSSLTAENRQQCLWHLKEIGYQVGTGFMVGSPYQTSENLADDLLFIKSLNPQMI 232

Query: 203 SLYQLTIEKGTLFYKM 218
            +        T F   
Sbjct: 233 GIGPFISHHDTPFKDQ 248


>gi|315223707|ref|ZP_07865557.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287]
 gi|314946282|gb|EFS98281.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287]
          Length = 437

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + I++ +   + +        + + +  G    G   +
Sbjct: 151 CDYKCTYC---TIPMARGISRSDTIENIIANAKKISDKGIKEIVLTGVNIGDYGKGEFGN 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    ++  + K   +      +IE  P+ ++        ++   V    + +QS 
Sbjct: 208 KKHEHTFLELVQALDKVEGIERLRISSIE--PNLIKDETIDFIAQSNSFVPHFHIPLQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     ++ +   R + P   +  D+I   P +T   +           
Sbjct: 266 SNEILKKMKRRYLRELYVSRVAKIREVMPDACIGVDVIVGFPGETDEHFLETYYFLNDLD 325

Query: 199 VDHLSLYQLTIEKGT 213
           + +L ++  +    T
Sbjct: 326 ISYLHVFTYSERDNT 340


>gi|254974329|ref|ZP_05270801.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-66c26]
 gi|255091725|ref|ZP_05321203.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile CIP 107932]
 gi|255313453|ref|ZP_05355036.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-76w55]
 gi|255516141|ref|ZP_05383817.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-97b34]
 gi|255649237|ref|ZP_05396139.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-37x79]
 gi|260682410|ref|YP_003213695.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile CD196]
 gi|260686009|ref|YP_003217142.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile R20291]
 gi|306519339|ref|ZP_07405686.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-32g58]
 gi|260208573|emb|CBA61259.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile CD196]
 gi|260212025|emb|CBE02579.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile R20291]
          Length = 584

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 73/237 (30%), Gaps = 21/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          +    +    L  ++   +      +S I F   T +    +
Sbjct: 186 CPFNCQYC------LSSTIPGLRYFS--LDRIKSDLKALIDARVSQIKFIDRTFNA-NRK 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
               I+D + KN           E     ++    +       G+ +  +GVQS  E++L
Sbjct: 237 VAMEIMDFLMKNDN--GYTTYHFEVTAYLIDDKMLEFLADCKEGLFQFEIGVQSTNEKTL 294

Query: 146 RFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +GR  +  +    +   A         DLI  LP +    +E       +  ++HL L
Sbjct: 295 DAVGRRDDFKKLSHVVQTVASYRNIHQHLDLIAGLPYEDYKSFENSFNDVFNLGIEHLQL 354

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS----AHGLHAYEIS 254
             L + KGT   K    H              + Y   +           L  Y  S
Sbjct: 355 GFLKMIKGTGMRKVADEHGFKYKDYAPYEFLYNNYISYEETLKLKDIEDILERYYNS 411


>gi|254451116|ref|ZP_05064553.1| MiaB-like tRNA modifying enzyme [Octadecabacter antarcticus 238]
 gi|198265522|gb|EDY89792.1| MiaB-like tRNA modifying enzyme [Octadecabacter antarcticus 238]
          Length = 405

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 23/204 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C  +C +C     +  Y  G    + + +  ++ +++L G          +    +G   
Sbjct: 135 CDHRCTFC-----IIPYGRGNSRSVPAGV-VVEQIKRLVGKGYNEIVLTGVDLTSWGADL 188

Query: 81  PSLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P+L +  ++   IL  +     +  +   +IE     V+ N           +  + L +
Sbjct: 189 PALPKLGDLVMRILKLVPDLPRLRISSIDSIE-----VDDNLLCAIATEPRLMPHLHLSL 243

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+   
Sbjct: 244 QHGDDLILKRMKRRHLRDDAIKFSEDARKLRPDMTFGADIIAGFPTETEAHFENSLKLID 303

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMH 219
             A+  L ++  +  +GT   +M 
Sbjct: 304 DCALTWLHVFPYSPRQGTPATRMP 327


>gi|188995948|ref|YP_001930200.1| putative Fe-S oxidoreductase [Porphyromonas gingivalis ATCC 33277]
 gi|188595628|dbj|BAG34603.1| putative Fe-S oxidoreductases [Porphyromonas gingivalis ATCC 33277]
          Length = 444

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 63/202 (31%), Gaps = 13/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +  +     +   I+S + + + +    G + I       G       +
Sbjct: 161 CDYHCSYC---TIPKARGRSRNGSIESLVRQAEAVAA-EGGKEIVLTGVNIGDFGRSTGE 216

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               +L  + +   +      +IE  P+ +          A        + +QS  +  L
Sbjct: 217 TFLDLLRALDQVEGIERYRIGSIE--PNLLSDELIDFCASAHRIAPHFHMPLQSGSDDVL 274

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     +   R   P   +  D+I     +    +  +    L   +    
Sbjct: 275 KLMRRRYDTALFRERVEHIRRALPHAFIGIDVIVGTRGEKPE-FFEDCYSFLQDKISFSR 333

Query: 204 LY--QLTIEKGTLFYKMHKDGD 223
           L+    +   GT   ++    D
Sbjct: 334 LHVFSYSERPGTQALQIPYKVD 355


>gi|154502580|ref|ZP_02039640.1| hypothetical protein RUMGNA_00393 [Ruminococcus gnavus ATCC 29149]
 gi|153796772|gb|EDN79192.1| hypothetical protein RUMGNA_00393 [Ruminococcus gnavus ATCC 29149]
          Length = 307

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 19/235 (8%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQW-MRQLTGPRSISS--IFFGGGTPSLIEPQN 88
           C +C   S       G      S   +++     ++  R + S   +F   T +    + 
Sbjct: 46  CIFCS--SQGSGDFAGSARL--SIAEQIRQGKADISSKRPVHSYIAYFQAFTNTYAPVET 101

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  +      +  V     ++I   P  +  +      +    +   + LG+Q++  ++ 
Sbjct: 102 LRALYMEAIADPEVK---ILSIATRPDCLGADVLALLDEINQIKPVWVELGLQTIHPETS 158

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            ++ R +  S    A+   R I   +    I  LP +T       +       +  + L 
Sbjct: 159 AYIRRGYELSVFEQAVKELRAIGITVIVHTILYLPGETKDDMLDTIHYLNHMDIQGIKLQ 218

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L +   T     ++     +P      D+ +  Q + +       EI  H   G
Sbjct: 219 LLHVLTHTDLAADYEKHPFYIP------DMQDYIQFLGTCIAHLNPEIVIHRLTG 267


>gi|291520578|emb|CBK75799.1| biotin synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 325

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 66/200 (33%), Gaps = 27/200 (13%)

Query: 28  CVKKCPYCDFNSH----VRRYKVGQENFIQSFLTE-----MQWMRQLTGPRSISSIFFGG 78
           C + C +C  +S     +  ++V   +++ +         +    Q++  R ++      
Sbjct: 61  CSENCKFCAQSSCSKADIDTFEVRDADYVAADAKAHSGKGIAHYCQVSSGRRLNKSEV-- 118

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
                     I   +  I     ++  + + +      ++  +    + AGV R+   ++
Sbjct: 119 --------AQICENVKRIVAETDMAPCISLGL------IDKEDLLALKAAGVQRVHNNIE 164

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           +   +  + +   H   E I  + L   +   +    I+ +  +T +         +   
Sbjct: 165 T-SPEYFKKVCSTHTTDEKIEYMKLVHEVGLELCSGGIFGI-GETWSDRIDMAFALVEIQ 222

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D + +  L   KGT     
Sbjct: 223 PDSVPINMLKPIKGTPMEDR 242


>gi|195143761|ref|XP_002012866.1| GL23830 [Drosophila persimilis]
 gi|194101809|gb|EDW23852.1| GL23830 [Drosophila persimilis]
          Length = 589

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 66/216 (30%), Gaps = 28/216 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C   C YC            +   + S + E+Q +++       L G    S    G G 
Sbjct: 257 CDNMCTYC---IVPFTRGRERSRPLASIVNEVQALQEQGVKEVTLLGQNVNSYRDKGAGQ 313

Query: 81  P--SLIEPQNIALILDGIAKNWTVSSNVEITIEA-----------NPSSVEVNNFQGYRK 127
              + + P     +          S  ++   EA           +P        +  R 
Sbjct: 314 TSDTSLVP-GFKTVYKPKTGGIPFSELLQSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRD 372

Query: 128 AG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQT 183
                 ++ L  QS   + L  + R +     +  +   R I P +    D I     +T
Sbjct: 373 YPNVCKQLHLPAQSGNTEVLARMRRGYTREAYLELVEHIREILPTVGLSSDFICGFCGET 432

Query: 184 MTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             ++E  +        +   L+  ++ + T  ++ +
Sbjct: 433 EAEFEDTISLINRVQYNVAYLFAYSMREKTTAHRRY 468


>gi|32266773|ref|NP_860805.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           hepaticus ATCC 51449]
 gi|32262825|gb|AAP77871.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 443

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 100/299 (33%), Gaps = 37/299 (12%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+ A    M  +   ++ +      C KKC YC   F +  +   V ++  I      + 
Sbjct: 109 YVFASSQGMGIKAHLNISI-----GCDKKCSYCIVPF-TRGKEISVPKDLLISEAKKCVA 162

Query: 61  WMRQ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
              +    L    +   + F    P      N   +L  +++   +          +P  
Sbjct: 163 SGAKELLLLGQNVNNYGVRFSHSHP----KTNFTQLLRALSEIDGLYRIRF--TSPHPLH 216

Query: 117 VEVNNFQGYRKAGVNR--ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
           ++    + +    V    I + +QS   Q L+ + R ++    +  I   +++ P +   
Sbjct: 217 MDDEFLEEFASNPVIAKGIHIPLQSGSSQILKMMRRGYDKQWYLNRIAKLKSLVPNVGIG 276

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D+I   P ++   +E  ++       D L  +  +    T  ++           +   
Sbjct: 277 TDIIVGFPTESEQDFEDTMEVLSLVEFDTLYSFVYSPRPHTSAFE----------YDKSM 326

Query: 233 VDLYNLTQSITSAHGLHAYEI-SNHSFLGAESLHNL----NYWRYGDYIGIGPGAHSRV 286
           +    + +   +       EI S  + L    +HN+    +Y   G     G  + +++
Sbjct: 327 LVSPEVAKERLARLQNLHKEILSKKAQLEIGRIHNVLIENHYNGEGQCWSEGRSSSNKL 385


>gi|298208381|ref|YP_003716560.1| putative Fe-S oxidoreductase [Croceibacter atlanticus HTCC2559]
 gi|83848302|gb|EAP86172.1| putative Fe-S oxidoreductase [Croceibacter atlanticus HTCC2559]
          Length = 458

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 71/200 (35%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + +++ L   + + +      + + +  G    G   +
Sbjct: 158 CDYKCTYC---TIPLARGISRSDTMENVLQNAKEIAEQDIKEIVLTGVNIGDYGKGEFGN 214

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    +++ + K   +      +IE  P+ ++         +   V    + +QS 
Sbjct: 215 KRHEHTFLELVENLDKVEGIERLRISSIE--PNLLKNETIDFVSNSDKFVPHFHIPLQSG 272

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +N    +  +   +++ P   +  D+I   P +T   +           
Sbjct: 273 SNALLKLMRRRYNRELYVDRVARIKSVMPNACIGVDVIVGFPGETEELFLETYNFLNDLD 332

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           + +L ++  +    TL  +M
Sbjct: 333 ISYLHVFTYSERDNTLAAEM 352


>gi|300871330|ref|YP_003786203.1| 2-methylthioadenine synthetase [Brachyspira pilosicoli 95/1000]
 gi|300689031|gb|ADK31702.1| 2-methylthioadenine synthetase [Brachyspira pilosicoli 95/1000]
          Length = 424

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 4/118 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P   +                I L  QS  ++ L  + R +   E I  +   R  
Sbjct: 220 LTSHPKDFDKELADAIWSLNSLCKHIHLPFQSGSDRILSLMNRKYTKEEYIKKVSFLREH 279

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                +S D+I     +T  +++  L    S   +   LY+ +  +G++ YK     D
Sbjct: 280 ADDFPISTDIIVGYADETEEEYQETLDLLESIGFEEAYLYKYSEREGSIAYKKKVQYD 337


>gi|171184704|ref|YP_001793623.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170933916|gb|ACB39177.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
          Length = 353

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 17/186 (9%)

Query: 22  YVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           Y +   CV KCP C F     R     E + +        + +      ++ +   GG  
Sbjct: 49  YTNI--CVAKCPICAFY----RSPGHPEAYTRKAEEVAALVERFAVEYGVTELHINGGFN 102

Query: 82  SLIEPQNIALILDGIAKNWTV-----SSNVEITIEANPSSVE-VNNFQGYRKAGVNRIS- 134
            L+ P+    +   + +          +  E    A    +        +++AG++ IS 
Sbjct: 103 PLLPPEYFDELFKAVKRRVPHVVVKGPTMAEAAYYAGLWKMSVREVLSRWKEAGLDAISG 162

Query: 135 LGVQSLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            G +   ++  + +   H  +  E +    +A  +    +  ++Y    + +      + 
Sbjct: 163 GGAEIFADEVRKVVA-PHKISGEEWLRVAEVAHELGIPSNATVLYGHV-EAVEHLVDHIF 220

Query: 193 RALSYA 198
           R     
Sbjct: 221 RVRELQ 226


>gi|189347087|ref|YP_001943616.1| MiaB-like tRNA modifying enzyme YliG [Chlorobium limicola DSM 245]
 gi|238065321|sp|B3EDL2|RIMO_CHLL2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|189341234|gb|ACD90637.1| MiaB-like tRNA modifying enzyme YliG [Chlorobium limicola DSM 245]
          Length = 429

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 25/203 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C ++C +C       RY        +  L E   +RQ        +    S+      G 
Sbjct: 142 CNRQCSFCSIPKIRGRY---VSQPPEQLLREAALLRQSGVRELNLIAQDISVYGCDLDG- 197

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
             S +    +  + D   +   +       + A P +  +      R+     N + + +
Sbjct: 198 --SSLLNDLVLRLSDMEFERIRL-------LYAYPLNFPMEVIDTMRERENVCNYLDMPL 248

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q + ++ LR + R  +++  +  I   R   P +     +I   P +T  ++E  LQ   
Sbjct: 249 QHISDRILRSMNRGIDSTGTVRLIESIRQRNPDIRLRTTMIAGYPGETGEEFEELLQFVA 308

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               D L  +  + E+ +  Y++
Sbjct: 309 ETRFDRLGCFPYSHEEHSPAYRL 331


>gi|320120549|gb|EFE28938.2| biotin synthase [Filifactor alocis ATCC 35896]
          Length = 325

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 17/197 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C + C YC  +S    YK   E +      E+  + +    R +   S+   G     + 
Sbjct: 64  CSEDCKYCAQSSW---YKTQVEEYPLMEEKELIDLAKYNHDRGVVRYSVVTSGRR---LS 117

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +++  +         +   V+I + A+   +E  +F+  +  GV+R+   +++      
Sbjct: 118 KKDVDAV---CKSITNLRKEVDIQVCASFGLLEKEDFEKLKAVGVSRVHNNLETSR---Q 171

Query: 146 RFLGR--NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            F+     H   + I AI  A+    ++    I  L  +TM      +       +  + 
Sbjct: 172 NFINICTTHTYEDKIHAIRQAQEAGLKVCSGGIMGL-GETMEDRVNMVIDIRELGIKSIP 230

Query: 204 LYQLTIEKGTLFYKMHK 220
           +  L    GT +  +  
Sbjct: 231 VNFLNPIPGTPYENVPM 247


>gi|238019356|ref|ZP_04599782.1| hypothetical protein VEIDISOL_01220 [Veillonella dispar ATCC 17748]
 gi|237864055|gb|EEP65345.1| hypothetical protein VEIDISOL_01220 [Veillonella dispar ATCC 17748]
          Length = 426

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++          + +  L    +   + F  GT 
Sbjct: 142 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTELGAKGFKEITLLGQNVNSYGLDFKDGT- 199

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 200 ------DFGTLVDALDGIPGIERIRY--MTSHPQDMTKSMIDALGRSSNIVTHLHLPIQS 251

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++        +   R     +    D+I   P +T   +   LQ     
Sbjct: 252 GSNRILKKMNRHYTVEHYKELLSYCREKIKDVVVTTDIIAGFPGETEEDFLATLQLLKDV 311

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 312 RYDMAYTFIYSKRSGTPAATM 332


>gi|206602762|gb|EDZ39243.1| Biotin synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 346

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 12/213 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLIE 85
           C + C +C  +SH +             + +   + +  G R       G G   PS  +
Sbjct: 81  CSEDCHFCSQSSHHQTISPEFPLTPPETIRKTATLAKENGARRFCVATSGRGLSDPS--D 138

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I+  ++ +  +  + S   + I      +  +  +  R+AG+NR+   +++   +  
Sbjct: 139 VRGISRAIETVRNDVGIWSCATLGI------LSRSVLETLREAGLNRLHHNLET-SREFF 191

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H   E I  I  A+     +    I+ L  +T       L+      VD + + 
Sbjct: 192 PNIVTTHAYEERIDTIRKAKEQGISVCSGGIFGL-GETDADRVGLLETLRELDVDSVPIN 250

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            L    GT  Y      +      ++AV  + L
Sbjct: 251 FLVPIPGTPLYDQGAGIEAKDALRSIAVTRFML 283


>gi|118579915|ref|YP_901165.1| biotin synthase [Pelobacter propionicus DSM 2379]
 gi|118502625|gb|ABK99107.1| iron-only hydrogenase maturation protein HydE [Pelobacter
           propionicus DSM 2379]
          Length = 357

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 25/198 (12%)

Query: 28  CVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C ++C YC  N H   + RY++  +  +            L     +       G    I
Sbjct: 49  CSRRCGYCGLNVHNSSIGRYRMTDDEIVA----CAHQASALGYGTVVMQAGEDPG----I 100

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             Q +  ++  I +   ++  V +++   P          +  AG +R  L  ++     
Sbjct: 101 GKQWMHDLIRRIKRETDLA--VTLSLGERPD----EELCSWFDAGADRYLLRFETSRRSL 154

Query: 145 LRFLGRNHNA-----SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              +   H       S+ IA +   +     +   ++  +P QT      ++       +
Sbjct: 155 YDSI---HPPLAGTMSDRIALLRRLKLFGYEIGSGVMIGIPGQTYDDLATDILLFKELDL 211

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D + +      + T   +
Sbjct: 212 DMIGVGPFIPHQATPLGR 229


>gi|296197315|ref|XP_002806724.1| PREDICTED: LOW QUALITY PROTEIN: CDK5 regulatory subunit-associated
           protein 1-like 1-like [Callithrix jacchus]
          Length = 579

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 77/232 (33%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +       Q         S  +  +G    + + 
Sbjct: 214 CLNACTYCK-TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 271

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 272 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHVPVQSA 325

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 326 SDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 385

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   K+       +P++       +L++   S    H 
Sbjct: 386 FPSLFINQFYPRPGTPAAKI-----EQVPAQVKKQRTKDLSRVFHSYSPYHH 432


>gi|229891227|sp|Q5GSS2|MIAB_WOLTR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 442

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 68/203 (33%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTE-MQWMRQ-------LTGPRSISSIFFGGG 79
           C K C +C                +     E ++ +         L    +     + G 
Sbjct: 157 CDKFCTFC---VVPYTRGAEYSRPVNEIFREALKLVANGAKEINLLGQNVNAYHGEYEGE 213

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                   ++  ++  IAK   +      T  ++P  +  + +  + +A   +  I L V
Sbjct: 214 V------WDLGKLISHIAKIEKLERIRYTT--SHPRDMHESLYLAHAEAPKLMPFIHLPV 265

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS   + LR + R +   E +  I   R + P++  S D I   P +T   +E  ++   
Sbjct: 266 QSGSNKILRAMNRKYTTEEYLEIIERFRKLKPKIEFSSDFIVGFPGETEKDFEGTIKLVE 325

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
                    ++ +   GT   + 
Sbjct: 326 RVRYAQAYSFKYSTRPGTPGAER 348


>gi|255305713|ref|ZP_05349885.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile ATCC 43255]
          Length = 584

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 73/237 (30%), Gaps = 21/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          +    +    L  ++   +      +S I F   T +    +
Sbjct: 186 CPFNCQYC------LSSTIPGLRYFS--LDRIKSDLKALIDARVSQIKFIDRTFNA-NRK 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
               I+D + KN           E     ++    +       G+ +  +GVQS  E++L
Sbjct: 237 VAMEIMDFLMKNDN--GYTTYHFEVTAYLIDDKMLEFLADCKEGLFQFEIGVQSTNEKTL 294

Query: 146 RFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +GR  +  +    +   A         DLI  LP +    +E       +  ++HL L
Sbjct: 295 DAVGRRDDFKKLSHVVQTVASYRNIHQHLDLIAGLPYEDYKSFENSFNDVFNLGIEHLQL 354

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS----AHGLHAYEIS 254
             L + KGT   K    H              + Y   +           L  Y  S
Sbjct: 355 GFLKMIKGTGMRKVADEHGFKYKDYAPYEFLYNNYISYEETLKLKDIEDILERYYNS 411


>gi|226324155|ref|ZP_03799673.1| hypothetical protein COPCOM_01934 [Coprococcus comes ATCC 27758]
 gi|225207704|gb|EEG90058.1| hypothetical protein COPCOM_01934 [Coprococcus comes ATCC 27758]
          Length = 620

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 90/307 (29%), Gaps = 56/307 (18%)

Query: 108 ITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     +     +  +  + G+ ++ +GVQS    ++R + R     +    +    
Sbjct: 293 FHFEVAADLLNEEEMELIKTMRPGLIQLEIGVQSTNLDTIREIHRTMKFEQVAEVVRRIN 352

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +        DLI  LP +    +        +   + L L  L + KG+   +   D  L
Sbjct: 353 SYGNVHQHLDLIAGLPYEDYESFGKSFDDVYALEPEQLQLGFLKVLKGSYMEEKRDDYGL 412

Query: 225 V---LPSENVAVDLYNLTQSITSAHGLH----------------AYEISNHSFLG--AES 263
           V   +P   V    +   +      G+                  Y I +        E 
Sbjct: 413 VYKGMPPYEVLYTKWLPYEDTLRLKGIEEMVETYYNSRQFCYTLPYLIRHFKRPFTLFEK 472

Query: 264 LHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPES--------------WLKMVR 309
           L         D +       S  +   + +     +  ++              +L+   
Sbjct: 473 LAEYYEENGLDTL-------SHARTARYEILYDFARFYDAERCEAYKQLLTLDFYLRENA 525

Query: 310 KNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIECERNLQRQGFIE 369
           K+       E +S E+          RL      +D E     N +   +R L++   IE
Sbjct: 526 KSRPLFAGDERISKEE---------FRLFY--DREDEERRYLENYENMEKRQLRKMTHIE 574

Query: 370 RVQFSRL 376
           R  +  L
Sbjct: 575 RFSYDVL 581


>gi|325920324|ref|ZP_08182261.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas gardneri ATCC
           19865]
 gi|325549186|gb|EGD20103.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas gardneri ATCC
           19865]
          Length = 489

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           +  ++     +       +V     C K C +C       R +     F    +   Q  
Sbjct: 171 IEKFDRLPEPRADGP-SAFVSIMEGCSKYCSFC--VVPYTRGEEVSRPFEDVLVEVAQLA 227

Query: 63  RQLTGPRSISSI------FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPS 115
            Q  G R I+ +      + G       +    A +   I     +     I     +P 
Sbjct: 228 AQ--GVREINLLGQNVNAYRGAYGADAGDAAQYADLGLLIRTIAQIDGVGRIRFTTSHPL 285

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
               +    YR      N + L VQ+  ++ L  + R + A E  + I   R + P +S 
Sbjct: 286 EFSDSLVDAYRDVPQLANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISI 345

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
             D I   P +T   +E  ++       D    +  +   GT 
Sbjct: 346 SSDFIVGFPGETEADFEKTMKLIEDVGFDQSFSFIYSRRPGTP 388


>gi|302344678|ref|YP_003809207.1| MiaB-like tRNA modifying enzyme YliG [Desulfarculus baarsii DSM
           2075]
 gi|301641291|gb|ADK86613.1| MiaB-like tRNA modifying enzyme YliG [Desulfarculus baarsii DSM
           2075]
          Length = 437

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 76/236 (32%), Gaps = 29/236 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ----LTGPRSISSIFFGGGTPSL 83
           C  +C +C   +        +       L E + + Q         +     +G   P  
Sbjct: 151 CRHRCHFC---TIPAIRGPLRSRPAADILAEAEAVAQSGVVELNLVAQDLSSYGHDRP-- 205

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAGV-NRISLGVQSLE 141
            +  ++A +L  IA    V+    + +  +P  +E    +   +  GV     L +Q L 
Sbjct: 206 -DGPDLAALLPQIAAVPGVAWVRPLYL--HPDVLETRLIRAICQTPGVLPYFDLPLQHLA 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  LR +GR    ++ +A I   R + P       L+   P +   ++   ++     A 
Sbjct: 263 DPVLRAMGRRRTGAQLLALIDEIRAMRPEAVLRGTLLVGHPGEGAAEFTRLMRGVEEIAF 322

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
           DHL  +    E G+   ++                   L Q            IS 
Sbjct: 323 DHLGAFAFCPEPGSRSARLP-------------APSPELAQERLETLMAAQRAISA 365


>gi|262340984|ref|YP_003283839.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
           synthetase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272321|gb|ACY40229.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
           synthetase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 453

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 91/257 (35%), Gaps = 27/257 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG---------PRSISSIFFGG 78
           C   C +C     +  +  G+E     + + ++  + L            +++ S  +  
Sbjct: 165 CDNMCTFC-----IVPFTRGRERSSSPY-SIIEQCKHLYQNGYKEITLLGQNVDSYRWSK 218

Query: 79  GTPSLIEPQNIALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           G  ++   + + L+ L+  +     S+       +NP  +     +   K       I L
Sbjct: 219 GFITIGFSELLNLLALEIPSMRIRFST-------SNPHDMSDKVLEIISKHPNICKHIHL 271

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQR 193
            VQS   + LR + R +   + ++ ++  R I P   +S D++     +     +  +  
Sbjct: 272 PVQSGSNKILRLMNRKYTREKYLSLVNRIRTIIPECSISHDIMTGFCNEEEKDHQDTIDL 331

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
                 ++  ++  +   GT  Y+  +D       +    ++ +L ++ +S         
Sbjct: 332 MNKIQYNYGYMFSYSPRPGTYAYRNLQDNVPKDVKKKRLKEIIDLQRNHSSFRMKEYLGK 391

Query: 254 SNHSFLGAESLHNLNYW 270
                +  ES  N  YW
Sbjct: 392 VQEILIEGESKKNCQYW 408


>gi|238924259|ref|YP_002937775.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
 gi|238875934|gb|ACR75641.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
          Length = 434

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 12/202 (5%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC     +   R +V    F        +          ++ I          E
Sbjct: 153 CNQFCSYC----IIPYARGRVRSRRFENVIAEVERLAANGFKEVVLTGIHLSSYGVDFEE 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
              +  ++  +     +      ++E  P  V  +      K         L +QS  + 
Sbjct: 209 AVGLLELIQAVNAVKGIERIRLGSLE--PKIVTEHFASELSKLDKICPHFHLSLQSGCDA 266

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +L+ + R +   E      L R  F    ++ D+I   P +T  ++E             
Sbjct: 267 TLKRMNRKYTTKEYERGCELLRKYFVHPAITTDVIVGFPGETEEEFEQTKAYLEHIHFYE 326

Query: 202 LSLYQLTIEKGTLFYKMHKDGD 223
           + +++ +  KGT    M    D
Sbjct: 327 MHIFKYSKRKGTRAAVMPDQID 348


>gi|145220314|ref|YP_001131023.1| MiaB-like tRNA modifying enzyme [Prosthecochloris vibrioformis DSM
           265]
 gi|145206478|gb|ABP37521.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeovibrioides DSM
           265]
          Length = 451

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 73/223 (32%), Gaps = 20/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTPSL 83
           C   C YC   +        +    +  L + Q +            +++  +  GT   
Sbjct: 164 CDYGCAYC---TIPLARGRSRSVPPEVVLQQAQMLADSGYREIVLTGVNTGDYRSGTTGF 220

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +  + + ++ D       +SS         P  +          +   V    L +Q+  
Sbjct: 221 L--ELLRMLEDIDVPRIRISS-------LEPDILTDELVALVAASRTIVPHFHLPLQNGS 271

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R +  ++    +  A +      +  D++   P +    +   ++      +
Sbjct: 272 DRILGAMRRRYRTADYRERLLGAVDAIEDCAVGADVMVGYPGENDDDFGDTVRFIEGLPL 331

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  ++  ++  GT+  +    G+ +  +  VA     + + I
Sbjct: 332 AYFHVFSCSVRPGTVLAREVSCGERLAVAPQVASGRSAILKEI 374


>gi|95929526|ref|ZP_01312268.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95134223|gb|EAT15880.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 457

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 70/214 (32%), Gaps = 14/214 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC +          +   + + + ++  +++     ++          S+    
Sbjct: 191 CPFKCVYCTYP--GLEGHRFRPRPVDAVVEDLARLKRDHATSTVFFTD------SIFNDP 242

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              L L+   +      ++       P  +     Q  ++AG+  + +G  +  + +L  
Sbjct: 243 Q-GLYLELAEEMVRRELDIRWCAFFRPQGLNREVLQLLKRAGLYAMEMGTDAASDTTLAG 301

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +     E +A    A       +  +++  P +T       L        +H  ++  
Sbjct: 302 LDKGFGFDEVLACQQAAIAEQVPCAHFIMFGGPNETPETVAEGLSNIAKL--EHCVVFAF 359

Query: 208 T---IEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +   I   +   +     +++ P  ++   +Y  
Sbjct: 360 SGIRILPKSRLLERAIADNVIEPGASLIKPIYYF 393


>gi|304439636|ref|ZP_07399539.1| radical SAM protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371876|gb|EFM25479.1| radical SAM protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 303

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 82/234 (35%), Gaps = 27/234 (11%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           C  +        C +C      DF       K   ++ I+S +  ++  ++    + I+ 
Sbjct: 30  CPNRDGTLGNTGCIFCSKLGAGDF---AANSKDSIKDQIESQIEFLK--KKWNAKKYIA- 83

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVN- 131
            +F   T +  +   +  I     +   V   V +TI      + +           V  
Sbjct: 84  -YFQSFTNTYGDVDYLRKIFYEAIEYPGV---VGLTIATRADCLSDEILELLEELNKVTD 139

Query: 132 -RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME 190
             I LG+Q++ E+++ ++ R ++       +    N+   ++  +I+ LP +  T +   
Sbjct: 140 LNIELGLQTVNEKTIEYIRRGYSHKTFDKNVRNLINLGIDVTTHVIFGLPGEDETDFMNT 199

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +          + ++   IE+G+  Y+ +  G++        V           
Sbjct: 200 IDYINEIHPLGIKIHSFYIERGSNIYEEYVRGEVSTIDMETYVRSVVNAICRLK 253


>gi|193214527|ref|YP_001995726.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroherpeton thalassium ATCC 35110]
 gi|193088004|gb|ACF13279.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroherpeton thalassium ATCC 35110]
          Length = 550

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 22/198 (11%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      RRY+       + F+ E++    L    
Sbjct: 188 YIYIPLNTRLAVPNFARGCPFTCTFCSQWKFWRRYRARSP---KHFVDEIEI---LVKEY 241

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG 129
            +         P++ + + IAL  + I +N  V   +   +      V++     YRKAG
Sbjct: 242 KVGFFILADEEPTINKSKFIALCQELIDRNLNVGWGINTRVTDILRDVDL--LPFYRKAG 299

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
           +  +SLG ++  + +L    +     E   AI L ++         +  L  +T    E 
Sbjct: 300 LVHVSLGTEAASQLNLSIFRKETTIEENKLAIKLLKDNGIVAEAQFVMGLDHETPESIEE 359

Query: 190 ELQRALSYAVDH--LSLY 205
             +    +  D    ++Y
Sbjct: 360 TYRLCSDWDPDMANWTIY 377


>gi|124514356|gb|EAY55869.1| Biotin synthetase [Leptospirillum rubarum]
          Length = 346

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 12/213 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLIE 85
           C + C +C  +SH +             + +   + +  G R       G G   PS  +
Sbjct: 81  CSEDCHFCSQSSHHQTISPEFPLTPPETIRKTATLAKENGARRFCVATSGRGLSDPS--D 138

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I+  ++ +  +  + S   + I      +  +  +  R+AG+NR+   +++   +  
Sbjct: 139 VRGISRAIETVRNDVGIWSCATLGI------LSRSVLETLREAGLNRLHHNLET-SREFF 191

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H   E I  I  A+     +    I+ L  +T       L+      VD + + 
Sbjct: 192 PNIVTTHAYEERIDTIRKAKEQGISVCSGGIFGL-GETDADRVGLLETLRELDVDSVPIN 250

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            L    GT  Y      +      ++AV  + L
Sbjct: 251 FLVPIPGTPLYDQGAGIEAKDALRSIAVTRFML 283


>gi|323704197|ref|ZP_08115776.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536263|gb|EGB26035.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 467

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 11/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +        +++L        +  G    S  +  
Sbjct: 171 CNQYCTYC----IIPYARGPIRS--RKPNDIFDEVKRLRDNGYKEVVLTGIHVASYGKDL 224

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQG--YRKAGVNRISLGVQSLEEQS 144
               +LD I     +     I +    P+ +  +  +             + +QS  +  
Sbjct: 225 ENVDLLDIIKMIHEIEGIERIRLSSIEPTFLTEDFVREVSLLPKFCRHYHISLQSGSDSV 284

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR +  SE    +   R     ++   D++   P +T  ++    + A       +
Sbjct: 285 LKRMGRKYTTSEYKRIVERVRKYIEDVAITTDVMVGFPGETEREFNETYEFAKDIEFSKM 344

Query: 203 SLYQLTIEKGT 213
            +++ +   GT
Sbjct: 345 HVFKYSRRAGT 355


>gi|255008403|ref|ZP_05280529.1| putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis 3_1_12]
          Length = 745

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR--QLTGPRSISSIFFGGGTPSLI 84
           C + C +C  +SH   YK   + + + S    ++  +  +  G    S +  G   PS  
Sbjct: 62  CPENCKWCAQSSH---YKTKADVYDLVSAEECLRQAKYNEAQGINRFSLVTSGR-KPS-- 115

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P+N+  +     +    SS   I + A+   ++    Q    AGV R    +++     
Sbjct: 116 -PKNMKELCVAARRMRRHSS---IRLCASLGLLDEEELQALYNAGVTRYHCNLET-APSH 170

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L   H   + +  +H AR +   +    I  +  +T+ Q            +  + +
Sbjct: 171 FDSLCTTHTQEQKLKTLHAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRELDIQSIPI 229

Query: 205 YQLTIEKGTLFYKM 218
             L    GT     
Sbjct: 230 NLLQPIPGTPLEHQ 243


>gi|255099828|ref|ZP_05328805.1| putative adenosylcobamide-dependent radical SAM superfamily protein
           [Clostridium difficile QCD-63q42]
          Length = 584

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 73/237 (30%), Gaps = 21/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          +    +    L  ++   +      +S I F   T +    +
Sbjct: 186 CPFNCQYC------LSSTIPGLRYFS--LDRIKSDLKALIDARVSQIKFIDRTFNA-NRK 236

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSL 145
               I+D + KN           E     ++    +       G+ +  +GVQS  E++L
Sbjct: 237 VAMEIMDFLMKNDN--GYTTYHFEVTAYLIDDKMLEFLADCKEGLFQFEIGVQSTNEKTL 294

Query: 146 RFLGRNHNASEAIAAIHL-ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +GR  +  +    +   A         DLI  LP +    +E       +  ++HL L
Sbjct: 295 DAVGRRDDFKKLSHVVQTVASYRNIHQHLDLIAGLPYEDYKSFENSFNDVFNLGIEHLQL 354

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS----AHGLHAYEIS 254
             L + KGT   K    H              + Y   +           L  Y  S
Sbjct: 355 GFLKMIKGTGMRKVADEHGFKYKDYAPYEFLYNNYISYEETLKLKDIEDILERYYNS 411


>gi|220935372|ref|YP_002514271.1| radical SAM domain protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996682|gb|ACL73284.1| radical SAM domain protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 383

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 76/227 (33%), Gaps = 22/227 (9%)

Query: 28  CVKKCPYCDFNSH-------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C   C YC    H         R  +  +     +   ++ ++          +     T
Sbjct: 68  CRANCSYCGLARHREEARDYADRNFIRVDWPTARYDDVIERVKNNADKGQFERMCISMIT 127

Query: 81  -PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P+     +  ++L+   K      ++ ++I +NP+++   + +  R  G +  ++ + +
Sbjct: 128 HPN--SDHDTVVLLE---KWVKEVPHIPVSILSNPTTMSYEDLKNLRDKGADIFTVALDA 182

Query: 140 LEEQSL-----RFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQ 192
           +  +       + +   H   +   AI  A  IF   +    LI  +  +T  +     Q
Sbjct: 183 VTPEIFERTRGKTVDSPHRWDKYWQAIEWAAEIFGPEKFGAHLICGM-GETEQEILAVCQ 241

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           +       H  ++    E+G+L    +           +A  + +  
Sbjct: 242 KIRDMG-GHNHMFAFFPEQGSLMEDWNPVPRDQWRRVQLARFIIDYA 287


>gi|144899561|emb|CAM76425.1| tRNA-i(6)A37 modification enzyme MiaB [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 448

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 12/201 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E + +     +   ++L     +     G    +     
Sbjct: 163 CDKFCTFC-----VVPYTRGGE-YSRPSQAILDEAKKLVDQGVVEITLLGQNV-NAWHGD 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           +       I +   +     I     +P  ++ +    + +    +  + L VQ+   + 
Sbjct: 216 DGKSFGWLIRQLAKLDGLARIRFTTSHPRDMDDDLIDAHGEVKKLMPFLHLPVQAGSNRM 275

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R H+       +    A      +S D I   P +T   +   L         + 
Sbjct: 276 LEAMNRRHDRDFYFGLVDKLRAARPDLALSSDFIVGFPGETDADFADTLDLVRRVGFVNT 335

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
             ++ +   GT    M    D
Sbjct: 336 YSFKYSARPGTPAAIMPNQVD 356


>gi|330444283|ref|YP_004377269.1| MiaB-like tRNA modifying protein [Chlamydophila pecorum E58]
 gi|328807393|gb|AEB41566.1| MiaB-like tRNA modifying enzyme [Chlamydophila pecorum E58]
          Length = 425

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC                 Q  L E++ + +  G R +       G  S  E  
Sbjct: 149 CNSFCSYC---IIPYLRGRSVSRPSQEILEEIRTLIE-GGYREVVISGINVGDYSH-EGD 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS--LGVQSLEEQSL 145
           ++A +L  I     +          +P  V+ +  Q          S  L +QS     L
Sbjct: 204 SLASLLRKIDMLPGLERLR--VSSIDPDDVQEDLCQALVSCKHTCPSSHLVLQSGSNAIL 261

Query: 146 RFLGRNHNASEAIAAIHLA--RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +  +  +      +     + D+I   P ++   +E  ++         + 
Sbjct: 262 KRMNRKYTRNMFLDCVERLRSFDPHYTFTTDVIVGFPGESDQDFEDTVKIVEDVGFIKVH 321

Query: 204 LYQLTIEKGTLFY 216
           ++  +    T  Y
Sbjct: 322 IFPYSPRPRTRAY 334


>gi|306821155|ref|ZP_07454771.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550848|gb|EFM38823.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 331

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 69/195 (35%), Gaps = 17/195 (8%)

Query: 27  FCVKKCPYCDFNSH---VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C +KC YC  NS+   + RY++ ++  +Q  +   +      G ++I  +   G  P  
Sbjct: 58  YCKRKCAYCGLNSNNKNLTRYRIAEKEILQVAVETYKA-----GYKTI--VLQSGEDP-Y 109

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + I  I+        +    ++ +  +   +   +++  +  G +R  L  ++ +E+
Sbjct: 110 FTAEKIGDIV------RKIKEKTDMAVTVSCGEMSYEDYKYIKDCGADRYLLKHETSDEK 163

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L         +  +   + +        +  LP Q +     ++    +   D   
Sbjct: 164 LYSSLHSCGTLENRLQCLKNLKKLNYYTGSGFMIGLPGQNLRTIAKDILTLKTIPCDMAG 223

Query: 204 LYQLTIEKGTLFYKM 218
           +      + T    M
Sbjct: 224 IGPFIASQDTPLRDM 238


>gi|78357764|ref|YP_389213.1| hypothetical protein Dde_2722 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220169|gb|ABB39518.1| Protein of unknown function UPF0004 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 435

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 12/200 (6%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C YC   F     R +   +         +Q   +      ++   +G      + 
Sbjct: 150 CSHRCTYCIVPFTRGPSRSRAPHD-IADEVRRLLQGGFRELILSGVNLRQYGRDL--AMP 206

Query: 86  PQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
                ++     +     +    + I +  P  +            +   ++ L +QS  
Sbjct: 207 ADFWDVVARLGNEFGPEWAGRARLRISSLEPGQLGSKALDTLAANPLVSPQLHLSLQSGS 266

Query: 142 EQSLRFLGRNH-NASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYA 198
              LR +GR H      +  +H  R I+P   +  D++   P +T  ++E  L       
Sbjct: 267 ASVLRRMGRGHYTPQPLLDFLHSLRGIWPVYGLGADILMGFPGETREEFEETLAFCRELP 326

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           + +  ++  +   GT    M
Sbjct: 327 LTYAHVFPYSRRPGTAAADM 346


>gi|117924283|ref|YP_864900.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1]
 gi|117608039|gb|ABK43494.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1]
          Length = 467

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 64/214 (29%), Gaps = 11/214 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLT-EMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C K+C +C   +     +     ++ +     +Q   Q      I    +G         
Sbjct: 182 CDKRCTFCVIPALRGPSRSQSPQWVMAQAQSFLQAGYQELVLTGIDLGSYGREQT----- 236

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                +   + +  ++     + +   +P  +E        +A      + L +QS ++Q
Sbjct: 237 GQGWSLARLVEQLLSLDGLARLRLSSIDPMDMEPALIALMGRAPKLCPHLHLSMQSGDDQ 296

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R       +  +    A      +  DLI   P ++   +E          +  
Sbjct: 297 VLKRMHRGSTRQALLERVAQLRAVRPELVLGADLIVGFPTESEAAFEQSCDMVRRLEISL 356

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           L +++ +    T    + +   +           
Sbjct: 357 LHIFRYSARPDTPAAAIPRRFHVEDTRIKARAKQ 390


>gi|289578370|ref|YP_003476997.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus
           Ab9]
 gi|297544647|ref|YP_003676949.1| MiaB-like tRNA modifying protein YliG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528083|gb|ADD02435.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus
           Ab9]
 gi|296842422|gb|ADH60938.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 436

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 32/246 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ--------ENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C   C +C       RY+  +        E  ++    E+  + Q T    I  I+    
Sbjct: 154 CSNVCSFCAIPRIRGRYRSRKMEDILKEAEELVKKGAKELILIAQDTTKYGID-IYKKFM 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P L++  ++   L  I   +           A P SV     +  +     V  I + +
Sbjct: 213 LPQLLKELSLIPNLKWIRLLY-----------AYPDSVTDELIEEIKANKKVVKYIDIPL 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q   ++ L+ + R+    +    I  L       +    +   P +T  ++E        
Sbjct: 262 QHSNDEVLKRMKRHTTRQKIEEVINKLRTIPNMVIRTTFMVGFPGETEEEFEDLKHFVKE 321

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              + + ++  + E+GT  Y M          ++V +        I            N 
Sbjct: 322 KRFERVGVFAYSREEGTKSYYMKPQIK-----KSVKLRRQQELMEIQKEISYQH----NL 372

Query: 257 SFLGAE 262
           S +G +
Sbjct: 373 SKVGKQ 378


>gi|223038823|ref|ZP_03609115.1| 2-methylthioadenine synthetase [Campylobacter rectus RM3267]
 gi|222879796|gb|EEF14885.1| 2-methylthioadenine synthetase [Campylobacter rectus RM3267]
          Length = 420

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 38/234 (16%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           YL A E  +     ++   Y+     C +KC +C   +   + K       +S    +  
Sbjct: 106 YLQANEERVIT--GSNYHAYIKISEGCNQKCSFCAIPTFKGKLKS------RSLENIVGE 157

Query: 62  MRQLTGPRSISSIFFGGGTPSLIE------------PQNIALILDGIAKNWTVSSNVEIT 109
           +++L           G    S +                +  ++D + K   V +   + 
Sbjct: 158 VQKLVKK--------GYYDFSFLSQDSSSYMRDHAVSDGLISLIDAVEKIEGVKTARILY 209

Query: 110 IEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL---A 164
           +   PS+      +    + V  N   + +Q   ++ L+ + R   A+     ++L   A
Sbjct: 210 L--YPSTTSNALIERIIASPVFANYFDMPIQHASDKMLKIMRRGSGAARIKELLNLMKKA 267

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            N F R     I   P ++  +++        +  D +S +  + E+ TL Y+M
Sbjct: 268 PNAFLRTGV--IVGHPGESEAEFDELCAFLQEFKFDRVSAFAYSKEEDTLSYEM 319


>gi|60681113|ref|YP_211257.1| putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis NCTC 9343]
 gi|81315819|sp|Q5LEY1|BIOB_BACFN RecName: Full=Biotin synthase
 gi|60492547|emb|CAH07318.1| putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis NCTC 9343]
          Length = 748

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 9/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C  +SH  + K    + + +     Q         +  S+   G  PS   P+
Sbjct: 62  CPENCKWCAQSSH-YKTKADVYDLVSADECLRQAKYNEAQGVNRFSLVTSGRKPS---PK 117

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N+  +     +    SS   I + A+   ++    Q    AGV R    +++        
Sbjct: 118 NMKELCVAARRMRRHSS---IRLCASLGLLDEEELQALYDAGVTRYHCNLET-APSHFDS 173

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L   H   + +  +H AR +   +    I  +  +T+ Q            +  + +  L
Sbjct: 174 LCTTHTQEQKLKTLHAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRDLNIQSIPINLL 232

Query: 208 TIEKGTLFYKM 218
               GT     
Sbjct: 233 QPIPGTPLEHQ 243


>gi|317478949|ref|ZP_07938096.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
 gi|316904926|gb|EFV26733.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
          Length = 352

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 64/200 (32%), Gaps = 23/200 (11%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N ++ RY++ QE  +       +            +    GG    +
Sbjct: 62  CRNNCYYCGIRKENRNITRYELTQEEILSCCHEGYRL--------GFRTFVLQGGEAPAV 113

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + + +   +  I +++      +  I  +        ++ +  AG NR  L  +   E  
Sbjct: 114 KDEGMVETVAAIRQSFP-----DCAITLSLGEKSREAYERFFLAGANRYLLRHEICNEGH 168

Query: 145 LRFLGRNHNASEAI----AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R H A  ++      +   + I  ++   ++   P QT+     ++     +  +
Sbjct: 169 Y---HRLHPAEMSLSHRLQCLDWLKEIGYQVGTGIMVGSPYQTVDHLVEDILFIERFQPE 225

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
            + +        T F     
Sbjct: 226 MIGMGPFLPHHDTPFASFPP 245


>gi|91088221|ref|XP_973511.1| PREDICTED: similar to CG6345 CG6345-PA [Tribolium castaneum]
 gi|270011824|gb|EFA08272.1| hypothetical protein TcasGA2_TC005903 [Tribolium castaneum]
          Length = 610

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 66/252 (26%), Gaps = 32/252 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF------------ 75
           C   C YC            +   + S L E++ + Q  G + ++ +             
Sbjct: 269 CDNMCTYC---IVPFTRGKERSRPVDSILREIELLSQQ-GVKEVTLLGQNVNSYRDLSNS 324

Query: 76  -----------FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQ 123
                        G                 + K   V+  + I     +P         
Sbjct: 325 GDIFINNQTNLAKGFKTVYKSKIGGRRFAHLLEKVADVNPEMRIRFTSPHPKDFPDEVLH 384

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             +        + +  QS     L  + R +     I  +   R + P +S   D I   
Sbjct: 385 VIKSRPNICKNLHMPAQSGNTNVLERMRRGYTREAYIELVDHIRYLLPEVSLSSDFICGF 444

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             +T  ++E  +        ++  L+  ++ + T  ++ + D       +     +    
Sbjct: 445 CGETEEEFEDTISLMEMVQYNNAYLFPYSMREKTAAHRRYTDDVPAEVKQKRLERMIQTF 504

Query: 240 QSITSAHGLHAY 251
           +           
Sbjct: 505 RFYAEKLNRAQI 516


>gi|163849203|ref|YP_001637247.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroflexus aurantiacus J-10-fl]
 gi|222527181|ref|YP_002571652.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroflexus sp. Y-400-fl]
 gi|163670492|gb|ABY36858.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroflexus aurantiacus J-10-fl]
 gi|222451060|gb|ACM55326.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroflexus sp. Y-400-fl]
          Length = 549

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGP 68
           Y++ P             C   C +C      RRY+    + F+    T       L   
Sbjct: 186 YIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIET-------LVRD 238

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYR 126
            ++         P++   +    + + + +       V   I    + +  +      +R
Sbjct: 239 YNVGFFILADEEPTI-NRKKFTALCEELIRRQV---RVYWGINTRVTDILRDEAQLPLWR 294

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG+  ISLG ++  + +L    +     +   AI L +          I  +  +T   
Sbjct: 295 AAGLVHISLGTEAAAQMNLDRFRKQTTIEQNKRAIELIKKHGMVAEAQFIMGMENETPET 354

Query: 187 WEMELQRALSYAVDHLSL 204
            E   +  L +  D  + 
Sbjct: 355 IEETYRYVLDWKPDMANW 372


>gi|329903491|ref|ZP_08273508.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548333|gb|EGF33020.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 501

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC +C    D       +    + FI           +L          F     S 
Sbjct: 172 CPFKCEFCLSALD----KTAWPFALDGFIAELEKLHARGARLF---KFVDRTFNLNIKSS 224

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++     L       +  V ++ E+  +  P +++    Q     G  +  +G+QS    
Sbjct: 225 LKIMQFFLDKLAAYPDDPVYAHFEVVPDHLPDALKAGIMQF--PPGTLQFEIGIQSFNPD 282

Query: 144 SLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               + R  + ++A   I          +  DLI  LP + +  +     R ++     +
Sbjct: 283 VQALVSRKQDNAKAAENIRWLCEHSNAHLHVDLIAGLPGEDIASFARGFDRLVALQPHEI 342

Query: 203 SLYQLTIEKGTLFYK 217
               L   +GT   +
Sbjct: 343 QFGILKRLRGTPIIR 357


>gi|307687331|ref|ZP_07629777.1| hypothetical protein Ccel74_04188 [Clostridium cellulovorans 743B]
          Length = 311

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G   F I     +++ +          
Sbjct: 37  CPNRDGSINTGGCIYCSERGSGDF--------AGDRRFSISKQFDDIKAIMNKKWKNGKY 88

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAG 129
             +F   T +      +    +   +   V   V + I   P  +     +  +   K  
Sbjct: 89  IAYFQAYTNTYAPIDVLRSKYEEALEQEDV---VALAIATRPDCLSDQVLDLLEELSKKT 145

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q+ +E++   + R +  S    A+    +    +    I+ LP ++      
Sbjct: 146 YIWVELGLQTTKEETATIINRGYPLSTFETALKKLNDRNINVVVHTIFGLPGESKEDMLN 205

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++   S  +  + L+ L + K T   K++K+G L   S+   +D+     ++  ++ + 
Sbjct: 206 TIRYVASRQISGIKLHLLHLLKDTPLVKLYKEGTLEFLSKEEYIDIIITAITMLPSNMVI 265

Query: 250 A 250
            
Sbjct: 266 H 266


>gi|257056745|ref|YP_003134577.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Saccharomonospora viridis DSM 43017]
 gi|256586617|gb|ACU97750.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Saccharomonospora viridis
           DSM 43017]
          Length = 494

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P++   +      +     +++ + +QS  ++ L+ + R++ ++  ++ +    A 
Sbjct: 234 TSPHPAAFTDDVIDAMAETPNVCHQLHMPLQSGSDRVLKAMRRSYRSARFLSILDKVRAA 293

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
                ++ D+I   P +T   ++  L+            +Q +   GT   +M   
Sbjct: 294 MPDAAITTDIIVGFPGETEEDFQQTLEVVRQARFSSAFTFQYSPRPGTPAAEMPDQ 349


>gi|225850050|ref|YP_002730284.1| hypothetical protein PERMA_0494 [Persephonella marina EX-H1]
 gi|225646246|gb|ACO04432.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 432

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 76/218 (34%), Gaps = 13/218 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLIEP 86
           C   C +C   S   ++   +   I+  + E + +  L     +I S         +   
Sbjct: 142 CDHTCGFCAIPSIRGKH---RSRTIEDIVEEAKRLADLGVKELNIVSQDTSYYGTDIYGK 198

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  ++  + K   V       +   P++V  +  +    +   V    + +Q  E++ 
Sbjct: 199 PMLWELISRLEKIEGVRWIRLYYL--YPTTVTEDFIKRMADSEKVVKYFEMPIQHTEDRI 256

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +  S     +       P  +    +I   P +T   +E           D L
Sbjct: 257 LKDMMRGYRKSRIEKILEWKDRYIPEAAVRSAVIVGFPTETERDFESMKDFIKQAKFDWL 316

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +++ + E+GT  Y  ++D    +P E        +TQ
Sbjct: 317 GVFKYSHEEGTPAYTKYRD---SIPEEEKIRRKNEITQ 351


>gi|310657367|ref|YP_003935088.1| radical sam domain-containing protein [Clostridium sticklandii DSM
           519]
 gi|308824145|emb|CBH20183.1| putative Radical SAM domain protein [Clostridium sticklandii]
          Length = 270

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C+            E F    LT+++    + G +    +F  G  P  I  + + 
Sbjct: 29  KCAFCNMYK--------GEKFAHVSLTDIKAQL-MNGYKYTEKVFLVGAEPLSIGYEKMK 79

Query: 91  LILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            +L+ I +     + V       N S   V         G+ ++ +G +S  E++L  + 
Sbjct: 80  ELLELIHEYLPYCALVSSYASIKNISMYTVEQLSILHDMGLRQLYIGFESGLEEALILMK 139

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + H  +EAI             +  ++Y +    +++       +    +    +    L
Sbjct: 140 KGHTVNEAIEQAQKLNKAGLLFNSIIMYGIAGKGKSVENALATAKMLSQFKSHKIITMNL 199

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAV 233
            I   T   +M   G+ +    N  +
Sbjct: 200 QIFDDTDLAQMVSSGNFIPADRNERL 225


>gi|148263556|ref|YP_001230262.1| MiaB-like tRNA modifying enzyme [Geobacter uraniireducens Rf4]
 gi|146397056|gb|ABQ25689.1| MiaB-like tRNA modifying enzyme [Geobacter uraniireducens Rf4]
          Length = 444

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     +  Y  G+   +     L  ++ +  Q      ++ I  GG    L 
Sbjct: 159 CDAFCSYC-----IVPYARGRSRSVPLDEALAGIRTFAAQGFKEVVLTGIHLGGYGLDLT 213

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
            P  +  IL    K   V      ++E  P+ V           K     + + +QS  +
Sbjct: 214 PPLTLLDILIAAEKQQLVERIRVGSVE--PTEVSDALIAFLAGSKLVCPHLHIPLQSGND 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           Q L  + R + A+     +       P +    D+I   P ++  ++E   +   S  V 
Sbjct: 272 QVLSRMNRKYAANLFREVVEKLVCALPDICIGTDIITGFPGESAEEFEQGYRFLESLPVA 331

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +  ++  +   GT    M
Sbjct: 332 YFHVFPFSPRTGTPAATM 349


>gi|299146656|ref|ZP_07039724.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
           [Bacteroides sp. 3_1_23]
 gi|298517147|gb|EFI41028.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
           [Bacteroides sp. 3_1_23]
          Length = 804

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   Y+   E +      E     Q    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YQTKAEIYDLLPAEECLRQAQYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D +      SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVHYMRRHSS---IQLCASLGLLNEEELRSLHEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENEQP 308


>gi|58617513|ref|YP_196712.1| hypothetical protein ERGA_CDS_07860 [Ehrlichia ruminantium str.
           Gardel]
 gi|58417125|emb|CAI28238.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 405

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 15/142 (10%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +         +  ++   I   P  +               + L +QS     L+ 
Sbjct: 209 QLRRLRLSSIDVAEIEDDLIDIIGNEPRFMP-------------HLHLSLQSGNNLILKR 255

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R HN  + +   +    +   + F  D+I   P +T   +   ++      + +L ++
Sbjct: 256 MKRRHNREQVVEFCNRVSGMRKDIVFGADIIVGFPTETEDMFNDTVKLIEEANISYLHIF 315

Query: 206 QLTIEKGTLFYKMHKDGDLVLP 227
             +  +GT   +M +    V+P
Sbjct: 316 PYSAREGTPAARMPQVSPEVMP 337


>gi|291563947|emb|CBL42763.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
           SS3/4]
          Length = 441

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 15/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC            +    +    E++ + +      + +   G    S     
Sbjct: 153 CNQFCSYC---IIPYTRGRVRSRRPEDVEEEVKILAEEGYKEIVLT---GIHLTSYGIDF 206

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           + + I  +   I +   +     I      P  +         +         L +QS  
Sbjct: 207 KDEGIDFL-TLIRRLHEIDGIERIRFGSLEPRVITEEFASELSRLPKICPHFHLSLQSGC 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + +L+ + R++   E      + R  F    ++ D+I   P +T   +E   +       
Sbjct: 266 DDTLKRMNRHYTCEEYADRCEILRKHFKNPAITTDVIVGFPAETDADFETTRKFLEKVHF 325

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
             + ++  +   GT   +M   
Sbjct: 326 YEMHVFPYSRRAGTRADRMPDQ 347


>gi|196019608|ref|XP_002119009.1| hypothetical protein TRIADDRAFT_62979 [Trichoplax adhaerens]
 gi|190577345|gb|EDV18505.1| hypothetical protein TRIADDRAFT_62979 [Trichoplax adhaerens]
          Length = 267

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 49/146 (33%), Gaps = 11/146 (7%)

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           G PSL     I  +   +     +          + + ++   F         +  + L 
Sbjct: 58  GKPSL--GNMINRLFKMVPDIKRLR-----LSSIDVAEIDDELFDIIIHEPKFMPHLHLS 110

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q+ ++  L+ + R H   + I   +      P++    D+I   P +T   +       
Sbjct: 111 LQAGDDMILKRMKRRHRRQQVIDFCNEIWKYRPQIVLGADVIAGFPTETDEMFNNTYDLI 170

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHK 220
               + HL ++  +    T   +M +
Sbjct: 171 EQLKIVHLHVFPYSPRDNTPAARMPQ 196


>gi|91200115|emb|CAJ73158.1| strongly similar to biotin synthase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 333

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 14/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF---IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C +C  +S+   Y    E +    ++ + +     + TG  S+      G   S  
Sbjct: 66  CTEDCAFCSQSSY---YPTAIEKYNLIEENKIVDAALYAENTGAHSL------GIVTSGY 116

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              N   +        T+S +  I    +   +         K+G+ RI+  +++  E+ 
Sbjct: 117 SIDNENELDRVCRAISTISRDAHIHPHGSFGVLTREMADALAKSGLKRINHNLET-SERF 175

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            R +   H  ++ +  I+ ++     +    I+ + ++T               VD + L
Sbjct: 176 FRNICTTHTYADRLNTIYASKQAGLEICCGAIFGIGEET-EDRIHLAFTLKKLDVDSVPL 234

Query: 205 YQLTIEKGTLFYKM 218
             L    GT     
Sbjct: 235 NFLHPIPGTPMGNR 248


>gi|307594418|ref|YP_003900735.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
           14429]
 gi|307549619|gb|ADN49684.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
          Length = 366

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 15/180 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C +C F     R     E +  S    ++ +  +     I  +   GG    ++ +
Sbjct: 68  CVIACRFCAFY----RLPGHPEAYTLSVEEAVRRVAAIDREFGIRQVLVQGGINPELDIE 123

Query: 88  NIALILDGIAKNWTVS-----SNVEITIEANPSSVE-VNNFQGYRKAGVNRIS-LGVQSL 140
               +   +            S +E+   A    +         R AG++ ++  G + L
Sbjct: 124 YYEGLFKALKAKLPHVAIHGLSPIEVDYLARKHRMSYAEVLDRLRGAGMDTLAGGGGEIL 183

Query: 141 EEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  R +   H  +A   +  +  A  +    +  ++Y    +TM+ W   L R +   
Sbjct: 184 VDRVRRAIA-PHKIDADTWLNIMETAHRMGIMSNATMMYGHV-ETMSDWAEHLYRIIELQ 241


>gi|237709181|ref|ZP_04539662.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724341|ref|ZP_04554822.1| SAM/TRAM family methylase [Bacteroides sp. D4]
 gi|265752708|ref|ZP_06088277.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp.
           3_1_33FAA]
 gi|229437210|gb|EEO47287.1| SAM/TRAM family methylase [Bacteroides dorei 5_1_36/D4]
 gi|229456877|gb|EEO62598.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235894|gb|EEZ21389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp.
           3_1_33FAA]
          Length = 456

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 62/198 (31%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E       + +  +R L           G    S    +
Sbjct: 172 CNNFCHYC-----IVPYTRGRERSRD-VESILNEVRDLAAKGYKEVTLLGQNVNSY-RFE 224

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I+       TV+  V         ++P  +     Q   +       I L VQS  
Sbjct: 225 KEGEIITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQVIAETPNVCKHIHLPVQSGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R I P   +S D+      +T    +  L      A 
Sbjct: 285 SRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYHSETEEDHQESLSLMRECAY 344

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   K
Sbjct: 345 DSAFMFKYSERPGTYASK 362


>gi|99034378|ref|ZP_01314398.1| hypothetical protein Wendoof_01000800 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 198

 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 2/117 (1%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEME 190
           + L VQS   + L  + R H A E +  I   R + P +  S D I   P +T   +E  
Sbjct: 18  VHLPVQSGSNKILHAMNRKHTAEEYLEIIDRFRKLKPEIEFSSDFIVGFPGETEKDFEET 77

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           ++            ++ +   GT   +        + +E +      +++     + 
Sbjct: 78  MKLVEKVRYAQAYSFKYSPRPGTPGAERKDQVPEEVKTERLLRLQKLISKQQLEFNQ 134


>gi|332702710|ref|ZP_08422798.1| Ribosomal protein S12 methylthiotransferase rimO [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552859|gb|EGJ49903.1| Ribosomal protein S12 methylthiotransferase rimO [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 438

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--E 85
           C   C +C   +        +       L E + +      R +S +       +    E
Sbjct: 153 CSHACSFC---TIPSIRGKLRSEPADRLLVEARMLL----DRGVSELVLVAQDLTAYGRE 205

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG---VNRISLGVQSLE 141
            +    ++  + +   +S    + +    P+ +        R AG   +    + +Q   
Sbjct: 206 AEGSDGLIRLLEQLLPLSGLARLRLMYLYPAGLTDELLSFLRTAGAPLLPYFDIPLQHAH 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  +GR   A +    +   R  FP   +   LI   P +T   ++  L       +
Sbjct: 266 PEILSRMGRPF-ARDPWRVLDRVRERFPEAAIRTSLIAGFPGETQEHFQTLLDFVRKARL 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            HL ++    E+GT    M    D  +  E V + +    Q   S   +  Y
Sbjct: 325 THLGVFPYWPEEGTAAAGMEGQVDEDIKQERVRLLM--EAQEEISEELMAGY 374


>gi|325110857|ref|YP_004271925.1| radical SAM protein [Planctomyces brasiliensis DSM 5305]
 gi|324971125|gb|ADY61903.1| Radical SAM domain protein [Planctomyces brasiliensis DSM 5305]
          Length = 514

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 109/333 (32%), Gaps = 55/333 (16%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C     +   ++    F +++FL +MQ + +  G R    +         I  
Sbjct: 173 CPFTCEFC-----LSSLEIPVRQFDVEAFLEQMQSLFER-GTRQFKFVDRTFNLNMRISK 226

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQS 144
             +   LD           + +  E  P  +     +   K  AG  +  +GVQ+  +  
Sbjct: 227 AILQFFLDRY------EPGLFLHFEMIPDRLPAALRELIAKFPAGALQFEIGVQTFNDDV 280

Query: 145 LRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              + R  +  +       L       +  DLI  LP +T+  +     R ++     + 
Sbjct: 281 GELISRRQDNEKLADNFRFLREQTGVHIHADLIVGLPGETLESFGAGFDRLVALDPQEIQ 340

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +  L   +GT   +                   +  +          YEI ++  L  E+
Sbjct: 341 VGILKRLRGTPITR-------------------HDAEWEMRYSQSPPYEILSNRLLDFET 381

Query: 264 LHNL-NYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHP-------ESWLKMVRKNGHAV 315
           +  +  + R+ D +     A+S   + S+++  +  + P         W+  V +  H +
Sbjct: 382 MQRMRRFARFWDLV-----ANSGNFLESYKLLWADGRSPFTDFLAFSDWIYAVVQKTHGI 436

Query: 316 VEKEFLSSEQQADEFLMMGLRLREGISVKDWEM 348
                L       E +   L  ++G   +D   
Sbjct: 437 ----PLPK---LAERVFQFLTEQQGQPAEDVAQ 462


>gi|302876657|ref|YP_003845290.1| hypothetical protein Clocel_3858 [Clostridium cellulovorans 743B]
 gi|302579514|gb|ADL53526.1| conserved hypothetical protein [Clostridium cellulovorans 743B]
          Length = 312

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 29/241 (12%)

Query: 28  CVKK--------CPYC------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSIS 72
           C  +        C YC      DF         G   F I     +++ +          
Sbjct: 38  CPNRDGSINTGGCIYCSERGSGDF--------AGDRRFSISKQFDDIKAIMNKKWKNGKY 89

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAG 129
             +F   T +      +    +   +   V   V + I   P  +     +  +   K  
Sbjct: 90  IAYFQAYTNTYAPIDVLRSKYEEALEQEDV---VALAIATRPDCLSDQVLDLLEELSKKT 146

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM 189
              + LG+Q+ +E++   + R +  S    A+    +    +    I+ LP ++      
Sbjct: 147 YIWVELGLQTTKEETATIINRGYPLSTFETALKKLNDRNINVVVHTIFGLPGESKEDMLN 206

Query: 190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++   S  +  + L+ L + K T   K++K+G L   S+   +D+     ++  ++ + 
Sbjct: 207 TIRYVASRQISGIKLHLLHLLKDTPLVKLYKEGTLEFLSKEEYIDIIITAITMLPSNMVI 266

Query: 250 A 250
            
Sbjct: 267 H 267


>gi|116515198|ref|YP_802827.1| hypothetical protein BCc_272 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285406|sp|Q057G5|MIAB_BUCCC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|116257052|gb|ABJ90734.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 435

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 50/140 (35%), Gaps = 4/140 (2%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I ++P     N  + Y+K     N + L VQS   + L+ + R +   +    ++  + I
Sbjct: 228 ITSHPVEFNNNIIEAYKKIPKLTNFLHLPVQSGSNKILKLMKRGYTIEKYENIVNKIKKI 287

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P+++   D I   P +T   ++  +        D    +  +    T   K+  +  + 
Sbjct: 288 RPKINISSDFIIGFPGETKEDFQKTIYFISKINFDTSYSFIYSKRPRTRASKLEDNVTME 347

Query: 226 LPSENVAVDLYNLTQSITSA 245
              + +      + Q     
Sbjct: 348 EKKKRLYKVQQKINQQAFQW 367


>gi|51245786|ref|YP_065670.1| hypothetical protein DP1934 [Desulfotalea psychrophila LSv54]
 gi|50876823|emb|CAG36663.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 317

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 13/198 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C       R K  +   I++ L +++  R L    +  S+F   G    +   ++  
Sbjct: 58  CTFCG----AYRDKRFRAKPIETVLGDIEKARTLLPSPT--SLFLADGDALALPQMHLLK 111

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           IL  I     +     I   A+P S+     N     RK G++RI LG++S  ++ L  +
Sbjct: 112 ILCAIKD--KLPWVKRINSYASPRSLLQKTTNQLIRLRKLGLSRIYLGLESGADEVLCSV 169

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQ 206
            +   AS+ I     A +    +S  +I  L     +    +   +        H++   
Sbjct: 170 NKGACASQIIEGGKKALDSGLYLSTSIILGLGGKRYSKLHAQKTAEALSILRPQHIAALT 229

Query: 207 LTIEKGTLFYKMHKDGDL 224
           L I   T     +   + 
Sbjct: 230 LMILPETPLAHSYAGKEF 247


>gi|326315625|ref|YP_004233297.1| RNA modification enzyme, MiaB family [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372461|gb|ADX44730.1| RNA modification enzyme, MiaB family [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 449

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 66/203 (32%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C K C YC       R +     F    +       Q       L    +      GG  
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYLGKMGGTA 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               E  + AL+L+ +A    +      T  ++P+         Y +    V+ + L VQ
Sbjct: 213 ----EVADFALLLEYVADIPGIERIRFTT--SHPNEFTPRLIDAYARIPKLVSHLHLPVQ 266

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  + R + A E  + I    A      MS D I   P +T   +   ++    
Sbjct: 267 HGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFGKMMKLIDD 326

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D+   +  +   GT    +H
Sbjct: 327 IHFDNSFSFIFSPRPGTPAASLH 349


>gi|302342467|ref|YP_003806996.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639080|gb|ADK84402.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
          Length = 556

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 84/234 (35%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C  + ++ R    +          +  +R L     +++I F     S+    
Sbjct: 225 CPYHCAFCS-SQNMWRGHWRRRR----VALVIDEIRFLMDRHGVNTIVFNDENISVNRAW 279

Query: 88  NIALILDGIAKNWTVSSNVEITIEA--NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + L+ +      T  S   +++ +  +P  V+        ++GV   +L  +S  +++L
Sbjct: 280 FLELLGELAKLGVTWISGGGLSVRSLDDPRVVDE-----MYRSGVGLFNLAFESTSDRTL 334

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR-MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           R +G+     E+   I L R      ++   I   P +TM      L RA +  +D    
Sbjct: 335 RRIGKALTTEESARVIELVRQRGDGYVTGFFISGFPFETMADVRDNLDRAGALDIDWKCY 394

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           Y      G   Y+      L+   +    + ++  Q           E+ + ++
Sbjct: 395 YCFQPFPGAPLYEQCLQEGLIEAFDANYGENFHAPQ--LKHIDYTPQELFDENY 446


>gi|223935838|ref|ZP_03627753.1| Radical SAM domain protein [bacterium Ellin514]
 gi|223895439|gb|EEF61885.1| Radical SAM domain protein [bacterium Ellin514]
          Length = 451

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 74/217 (34%), Gaps = 22/217 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C  KC +C     FNS+  R        I   L E++ ++           F      S 
Sbjct: 168 CHFKCEFCAVQTVFNSNQTRRP------IDEILEEIRTLK----NEKKLFFFVDDNITS- 216

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
               N+A   +       ++         N +  +    +   ++G   + +G +SL   
Sbjct: 217 ----NLAEAKEFFRALIPLNIRWVSQSSINAAH-DDEFLELLVRSGCQGVLIGFESLNPA 271

Query: 144 SLRFLGRNHNASE--AIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +LR + ++ N        A+   R    R+    ++     T   +   ++ A  +A+  
Sbjct: 272 NLRKMNKSFNTMRGGFEQALANLRRHRVRVYGTFVFGYDGDTPESFGETVEFAQRHALYI 331

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +   LT   GT  Y+  +  D +L       D Y+ 
Sbjct: 332 AAFNHLTPFPGTPLYQRLQAEDRLLYEAWWLDDNYSY 368


>gi|118575230|ref|YP_874973.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A]
 gi|118193751|gb|ABK76669.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A]
          Length = 304

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 9/205 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD    + R K   E   +   +E+  M +         +  G      ++   +  
Sbjct: 43  CSFCD----MYRSKEYSERPWEQVRSEIDLMARQMPDTKRVFLADGDALN--LDTDYMVK 96

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I+  + +++  +       +  N      +     R+AG++ + LGV+S  +  L+ + +
Sbjct: 97  IVRHVKESFPSLERISCYAMPMNILKKSDDELNRLREAGLDMLYLGVESGSDLVLKKVTK 156

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLSLYQLT 208
              +S    A++  +     MS  +I  L  +T          +   S + +++    L 
Sbjct: 157 GATSSMISKAVNRGKGAGYVMSCMIILGLGGRTHSEEHIRGTAELINSCSPNYVGALTLY 216

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAV 233
           +E G     + K G+  +P  +   
Sbjct: 217 LENGIKGEFLEKFGEEFIPVSDEEA 241


>gi|115374498|ref|ZP_01461779.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310817815|ref|YP_003950173.1| hypothetical protein STAUR_0542 [Stigmatella aurantiaca DW4/3-1]
 gi|115368477|gb|EAU67431.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390887|gb|ADO68346.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 540

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 22/235 (9%)

Query: 25  WPF-----CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFG 77
            P+     C   C +C F      +   +  +        +     +  G   I ++   
Sbjct: 232 IPYESMRGCPFTCKFCSFP-----FASPEWRYKSADKICHDWASYAEANGASLIRAMDST 286

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
              P    P+ +  + +   K  ++    E    AN  +   +   G   +    +S+G 
Sbjct: 287 FTVP----PKRLRELFE---KLPSLGIRWEAYTRANVIN-TPDVVSGLEASHCTTLSIGF 338

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +S+   SL+++ +   A +   A  L  +         I   P + +  +EM  +  ++ 
Sbjct: 339 ESMSNNSLKYMNKKVTAEQNRRANELLADSAVDFRGSFIIGYPGENVEDYEMTQRFLVNE 398

Query: 198 AVDH--LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              H  LS++ LT E   ++         V    +   D  ++    ++A  LH 
Sbjct: 399 YARHFMLSVFSLTDETMPVWNDAELYKLEVFDKNDPDSDWRHIGMDTSTARALHR 453


>gi|77413341|ref|ZP_00789535.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           515]
 gi|77160583|gb|EAO71700.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           515]
          Length = 311

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HAKLEI 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       + I I   P  +         +        + LG+Q+  E +   +
Sbjct: 100 IKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR-ALSYAVDHLSLY 205
            R H+       +   R + P++     LI  LP +T       ++R  +   +  + L+
Sbjct: 160 NRAHSYDLYKKTVKRVRELAPKVEIVSHLINGLPGETHDMMVENVRRCVMDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +   T   + + +G L L S+    D  ++          H   I  H   G    H
Sbjct: 220 LLHLMTNTRMQRDYHEGRLRLLSQE---DYISIICDQLEIIPKH---IVIHRITGDAPRH 273

Query: 266 NL 267
            L
Sbjct: 274 ML 275


>gi|260494518|ref|ZP_05814648.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
 gi|260197680|gb|EEW95197.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_33]
          Length = 307

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 68/203 (33%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  N          ++       +++ +            +F   T +      +  
Sbjct: 43  CIFCSENGSGDFTSGRLKSIHTQIDEQIELVSNKYKGNK-YIAYFQNFTNTYANVNYLRK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           I +    +  +   V + I      +E +  +   +        I LG+Q++ ++  ++ 
Sbjct: 102 IYEEALSHKNI---VGLAIATRADCLEDDVLELLDELNKKTFLWIELGLQTINDEVAKYF 158

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +              +  +    +I  LPK+    +      + +     L L+ + 
Sbjct: 159 NRAYKTKIYEEVTKKLNKLNIKFVTHIIIGLPKEEDDDYLETAIFSQNCGTWGLKLHLMY 218

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           + K T   K+++ G+L + ++  
Sbjct: 219 VVKNTPLEKLYQSGNLKIYTKEE 241


>gi|160882906|ref|ZP_02063909.1| hypothetical protein BACOVA_00868 [Bacteroides ovatus ATCC 8483]
 gi|156111770|gb|EDO13515.1| hypothetical protein BACOVA_00868 [Bacteroides ovatus ATCC 8483]
          Length = 804

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   Y+   E +      E     Q    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YQTKAEIYDLLPAEECLRQAQYNEAQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D +      SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVHYMRRHSS---IQLCASLGLLNEEELRSLHEAGITRYHCNLETA-PSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 SKLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYKMHK 220
            L+   GT       
Sbjct: 294 LLSPIPGTPLENEQP 308


>gi|148262793|ref|YP_001229499.1| MiaB-like tRNA modifying enzyme YliG [Geobacter uraniireducens Rf4]
 gi|238066246|sp|A5GBX9|RIMO_GEOUR RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|146396293|gb|ABQ24926.1| SSU ribosomal protein S12P methylthiotransferase [Geobacter
           uraniireducens Rf4]
          Length = 448

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 68/199 (34%), Gaps = 10/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +   +   L E  + + +     ++ +    G    L   
Sbjct: 161 CSNCCSYC---VIPSLRGAFRSRPLDKLLKEARELVARGVKEINLIAQDITGYGKDLAGG 217

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++  ++  +A    +       + A P  +  +  Q  R        + + +Q + +  
Sbjct: 218 ASLEGLIKELAALDGLQWIR--LLYAYPDGISDSLIQLIRDEDKVCKYLDIPLQHVSDPV 275

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R  + +E  + I   R   P ++    LI   P +T   ++  L        D L
Sbjct: 276 LKRMNRRSSEAEIRSLIAKLRGEIPGIALRTSLIVGFPGETDEDFKKLLHFVEETRFDRL 335

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            ++  + E+GT   +M   
Sbjct: 336 GVFCYSREEGTPSAEMPDQ 354


>gi|313146126|ref|ZP_07808319.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis 3_1_12]
 gi|313134893|gb|EFR52253.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis 3_1_12]
          Length = 780

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR--QLTGPRSISSIFFGGGTPSLI 84
           C + C +C  +SH   YK   + + + S    ++  +  +  G    S +  G   PS  
Sbjct: 97  CPENCKWCAQSSH---YKTKADVYDLVSAEECLRQAKYNEAQGINRFSLVTSGR-KPS-- 150

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            P+N+  +     +    SS   I + A+   ++    Q    AGV R    +++     
Sbjct: 151 -PKNMKELCVAARRMRRHSS---IRLCASLGLLDEEELQALYNAGVTRYHCNLET-APSH 205

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L   H   + +  +H AR +   +    I  +  +T+ Q            +  + +
Sbjct: 206 FDSLCTTHTQEQKLKTLHAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRELDIQSIPI 264

Query: 205 YQLTIEKGTLFYKM 218
             L    GT     
Sbjct: 265 NLLQPIPGTPLEHQ 278


>gi|308274540|emb|CBX31139.1| Biotin synthase [uncultured Desulfobacterium sp.]
          Length = 332

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 9/188 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC   S V +  + +   +       +  +          +   G  PS  E  
Sbjct: 69  CKEDCHYCSQ-SRVSKADIKKYPLMAKDKLVDEAFKATKLNAKRYCMALSGTGPSDSEID 127

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  + K   +S             + +   +  ++AG++R++  + + +    + 
Sbjct: 128 ALCDIISTVKKQSDISLCCSTGF------LNMEKAKKLKEAGLDRVNHNLNTSKRFHPQM 181

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
               H+  + +  I + R     +    I     +T       L        + + +  L
Sbjct: 182 CT-THSYQDRLDTIAICRKAGLEVCSGGIVG-QGETDEDIIDLLLALREINAESIPINFL 239

Query: 208 TIEKGTLF 215
              KGT F
Sbjct: 240 VPIKGTPF 247


>gi|307190740|gb|EFN74642.1| CDKAL1-like protein [Camponotus floridanus]
          Length = 542

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 75/232 (32%), Gaps = 22/232 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ--ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++      +         S  +  +G    + + 
Sbjct: 211 CLNQCTYCK-TKHARGELGSYQPEEIVERAKQAFEEGVCELWLTSEDTGAYGRDIGTSL- 268

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  ++D       +     + +        + +     K        + + + VQS 
Sbjct: 269 PELLWKLVDV------IPDGCMMRVGMTNPPYILEHLDEMAKILRHPKVYSFLHIPVQSG 322

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +Q L  + R +  ++    ++          ++ D+I   P +T   +E  +     Y 
Sbjct: 323 SDQVLADMRREYTRADFEHTVNFLSERVPGLTIATDIICGFPTETEVDFEETMALCQKYK 382

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L + Q     GT   +M K     +P++ V      L++   S      
Sbjct: 383 FPSLFINQFFSRPGTPAARMPK-----VPTQEVKTRTKRLSEFFQSYEPYQH 429


>gi|296390085|ref|ZP_06879560.1| coproporphyrinogen III oxidase [Pseudomonas aeruginosa PAb1]
          Length = 142

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 271 RYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQQADEF 330
            + D +G+G  A S++      +          +   +     A+      +S+ +    
Sbjct: 3   GHCDLVGLGVSAISQIGD----LYSQNSSDINDYQTSLDNGQLAIRRGLHCNSDDRVRRA 58

Query: 331 LMMGLRLREGISVKDWEMLAGRNLDIEC------ERNLQRQGFIERVQFSRLRCTQRGMT 384
           ++  L     ++ +D E   G +                  G I R+    +  T  G  
Sbjct: 59  VIQQLICHFELAFEDIETEFGIDFRSYFAELWPDLERFAADGLI-RLDAKGIDITSSGRL 117

Query: 385 MLDSVI 390
           ++ S+ 
Sbjct: 118 LVRSIC 123


>gi|24380073|ref|NP_722028.1| hypothetical protein SMU.1699c [Streptococcus mutans UA159]
 gi|24378067|gb|AAN59334.1|AE014999_2 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 310

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 12/225 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +      F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIRDQFYKEVDFMHRKWPDVKKYLVYFQNFTNT---HDKVEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           I +   +       + I I   P     V +       +     + LG+Q+  E++ + +
Sbjct: 100 IRERYEQAINEPGVIGINIGTRPDCLPDVTILYLAELSQRLHVTLELGLQTTYEKTSKLI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R++ P++     LI  LP ++       ++R +    +D + L+
Sbjct: 160 NRAHSYQLYVETVKRVRDLAPKVEIVSHLINGLPGESHEMMLENVRRCVTDNDIDGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            L +   T   + + +G L L S    V++      I   + +  
Sbjct: 220 LLHLMTNTRMQRDYHEGRLHLLSMEEYVNIICDQLEIIPKNIVIH 264


>gi|308271792|emb|CBX28400.1| hypothetical protein N47_G37240 [uncultured Desulfobacterium sp.]
          Length = 501

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 58/170 (34%), Gaps = 16/170 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C +C   S      + +  + ++   E+  +             F    P+ I P 
Sbjct: 198 CYNHCAFCLVPSFYNDGALWRGRYPENIYQEISALADK------GCRDFYFVDPNFIGPG 251

Query: 87  ----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
               + I  +++ I        N+   +E  P+ ++ N  +    +G   + LG++S   
Sbjct: 252 KKGKERINKLMELIRPL-----NISFGMETRPNDLDPNILESLVSSGFKTLLLGIESGSS 306

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
             L  L +  + +    AI L R+         +  +P  T+       +
Sbjct: 307 SVLTNLNKGASINSGEKAIKLCRDAGIEPEVGFLMFVPDSTLEDLRHNFE 356


>gi|288817533|ref|YP_003431880.1| 2-methylthioadenine synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288786932|dbj|BAI68679.1| 2-methylthioadenine synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751136|gb|ADO44619.1| MiaB-like tRNA modifying enzyme [Hydrogenobacter thermophilus TK-6]
          Length = 410

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 69/204 (33%), Gaps = 18/204 (8%)

Query: 26  PF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           PF      C + C +C     V  +  G+   +     ++    +L   R    I   G 
Sbjct: 144 PFVKVQEGCNRFCSFC-----VIPFARGKSRSV--LKEKVLKEAELLAERGFKEIVLTGT 196

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQ--GYRKAGVNRISLG 136
             +         + D +     +     I + +  PS +           +       L 
Sbjct: 197 QLTQYGWDIATDLCDLLKDLVKIRGIELIRLSSLYPSEISQKLLDFVLLEEKIAPHFHLP 256

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRA 194
           +QS  ++ L+ + R+++  + +  +       P   +  D+I   P ++   +E   +  
Sbjct: 257 LQSGSDRILQLMRRDYSVKDYVHLVEKVIEKRPLSSVGTDVIVGFPSESDKDFEETYKLL 316

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
               + ++ ++  +  +GT   KM
Sbjct: 317 SQLPIHYMHVFPYSDREGTKACKM 340


>gi|256371457|ref|YP_003109281.1| RNA modification enzyme, MiaB family [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256008041|gb|ACU53608.1| RNA modification enzyme, MiaB family [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 487

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P  +    FQ   +       +   +QS  ++ L  + R ++A   +A +  AR  
Sbjct: 269 TSPHPKDMRTETFQAMAETPTVCESLHFPLQSGSDRILAAMHRGYSADRFLAKLAEARAT 328

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
                +S D+I   P +T   +E  L+ A   A D    +  +   GT    +    
Sbjct: 329 IDDLAVSTDIIVGFPGETDADFEATLEVAAEAAFDLAYTFIYSPRPGTEAAALVDRF 385


>gi|10198136|gb|AAG15204.1|AF288458_3 BchE [Chloroflexus aurantiacus]
          Length = 549

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGP 68
           Y++ P             C   C +C      RRY+    + F+    T       L   
Sbjct: 186 YIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARSPQKFVDEIET-------LVRD 238

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYR 126
            ++         P++   +    + + + +       V   I    + +  +      +R
Sbjct: 239 YNVGFFILADEEPTI-NRKKFTALCEELIRRQV---RVYWGINTRVTDILRDEAQLPLWR 294

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG+  ISLG ++  + +L    +     +   AI L +          I  +  +T   
Sbjct: 295 AAGLVHISLGTEAAAQMNLDRFRKQTTIEQNKRAIELIKKHGMVAEAQFIMGMENETPET 354

Query: 187 WEMELQRALSYAVDHLSL 204
            E   +  L +  D  + 
Sbjct: 355 IEETYRYVLDWKPDMANW 372


>gi|325291152|ref|YP_004267333.1| iron-only hydrogenase maturation protein HydE [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966553|gb|ADY57332.1| iron-only hydrogenase maturation protein HydE [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 358

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 59/193 (30%), Gaps = 18/193 (9%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C + C YC     +R      E +  S    ++                G  T  L   
Sbjct: 60  YCRRNCLYCG----IRGMNANAERYRLSESEILE--------CCQDGYNLGYRTFVLQSG 107

Query: 87  QNIAL----ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           +++      ++  + +   +  +  +T+      +    +    KAG +R  L  ++   
Sbjct: 108 EDMWYTKEILVGLVTRIKQLFPDAAVTLSIGERDI--ATYDALYKAGADRFLLRHETASR 165

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +    L    +  + +  +   + I  ++    +  LP Q       +L     +  + +
Sbjct: 166 ELYEKLHPGMSYDDRMGILRKLKQIGYQVGAGFMVGLPGQKEEHLAEDLLFLKEFQPEMI 225

Query: 203 SLYQLTIEKGTLF 215
            +        T  
Sbjct: 226 GIGPFIPHSETPL 238


>gi|238923854|ref|YP_002937370.1| hypothetical protein EUBREC_1482 [Eubacterium rectale ATCC 33656]
 gi|238875529|gb|ACR75236.1| hypothetical protein EUBREC_1482 [Eubacterium rectale ATCC 33656]
          Length = 302

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 65/226 (28%), Gaps = 15/226 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC   S         +  + S   ++   ++    +S       +F   T +      
Sbjct: 41  CLYC---SAGGSGDFAADRSL-SIKEQLSAAKEKVASKSSCEHFIAYFQAFTNTYAPVDY 96

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I     +     S   ++I           +    +    +   + LG+Q++   +L
Sbjct: 97  LRRIF---YEAIEDPSVAVLSIGTRTDCFSAEIYDLLSELNEIKPVWVELGLQTIHRSTL 153

Query: 146 RFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +   H    + I      R    ++   LI  LP +T       +       +  + L
Sbjct: 154 DAMN-THTCVDDFIIVTDELRRRGIKVIAHLILGLPHETRGMMLESVDFVAKSGIFGVKL 212

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             L + KGT    M+      L + +   D             +  
Sbjct: 213 QLLHVLKGTPLADMYIKQPFELFTLDDYCDFVVDCIERLPKDMVIH 258


>gi|183221932|ref|YP_001839928.1| hypothetical protein LEPBI_I2571 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912001|ref|YP_001963556.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776677|gb|ABZ94978.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780354|gb|ABZ98652.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 429

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC          +G        L +++++        +  I   G         
Sbjct: 147 CNRKCSYC---KIPAARGLGVSRKYDDILDQVKYL----QDNGVGEIQLTGVN------L 193

Query: 88  NIALILDGIAKNWTVSSNVEITIE--------ANPSSVEVNNFQGYRKAGV-NRISLGVQ 138
               + +G      +  ++   +E          P  V                + + +Q
Sbjct: 194 GWYRLENGEKGFLNLLEDILKVLEYSRIRLSSIEPPDVGSGLLDLMSHPRFCKFLHVPIQ 253

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALS 196
           S   + L+ + R ++       + LA++  P +    D+I   P +T  +++   Q  + 
Sbjct: 254 SGSRKILKEMRRTYHPDAFRTRMELAKSKLPNLFLGTDVIVGFPSETEVEFQETKQLLIE 313

Query: 197 YAVDHLSLYQLTIEKGT 213
                L ++  ++ KGT
Sbjct: 314 LGFAKLHVFPYSVRKGT 330


>gi|118373032|ref|XP_001019710.1| MiaB-like tRNA modifying enzyme, archaeal-type family protein
           [Tetrahymena thermophila]
 gi|89301477|gb|EAR99465.1| MiaB-like tRNA modifying enzyme, archaeal-type family protein
           [Tetrahymena thermophila SB210]
          Length = 574

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 24/229 (10%)

Query: 32  CPYCDFNSHVRRYKVGQ---ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           C YC   +   R K+G    E  +    T  +   +     S  +  +G    + I    
Sbjct: 208 CTYC--KTKHARGKLGSYQPEAIVNRVKTVCEEGVKEIWLTSEDTGAYGRDIGTDIS--Q 263

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSLEEQ 143
           +  ++  +     + ++V + +        + + Q            + + + VQ+    
Sbjct: 264 LLRLIVEV-----LPNDVMLRVGMTNPPYILEHLQNMSTILRHPRVFSFLHIPVQAANNT 318

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R +   E            P M+   D+I   P +T  Q++  L+    Y    
Sbjct: 319 VLENMNREYTCEEFEQVCDYLLKNVPNMTIATDIICGFPGETNAQFDDTLKLVDKYKFPI 378

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           L++ Q     GT   KM       +PS++V +    +T+   +      
Sbjct: 379 LNISQFYPRPGTAAMKM-----KKVPSQDVKMRSKKITELFDTFKRWDH 422


>gi|116748874|ref|YP_845561.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697938|gb|ABK17126.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 631

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 10/181 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC        +   +   + S L E++      G      I F     SL +P 
Sbjct: 235 CPLRCSYCS--IGGAEWLKYRRRSVDSVLREIEVAVNEYGA---GFIDFEDENLSLRKP- 288

Query: 88  NIALILDGIAKNWTVSSNVEITI--EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               +LDGI   +  +  +E+       P S++       ++AG   ++L + S   +  
Sbjct: 289 WFMELLDGITGRFG-AGRLELRAMNGLFPPSLDEEMVSAMKEAGFTALNLSLGSACPEQA 347

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA-VDHLSL 204
           R  GR         A+  A  +       +I   P Q+      +L        V  +S+
Sbjct: 348 RRFGRPDVRDGFERALAWAEQVGLNAVGYVIVGAPGQSAADSVDDLLYLAERPVVAGVSV 407

Query: 205 Y 205
           Y
Sbjct: 408 Y 408


>gi|312135507|ref|YP_004002845.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775558|gb|ADQ05045.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 536

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 80/223 (35%), Gaps = 18/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFTPLEKVFEELDYL----FKKQVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +N   S + ++  E +P+ +  +       +  N  R+ +G+QS   Q+L
Sbjct: 215 RAIRIIEFCKQN---SQSTQVHFEIDPTLLGNDIINAINSSKENLFRLEIGLQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R ++       +         +   DLI  LP +    ++  L R + Y  D + L
Sbjct: 272 DAIDRFYDIDRIDKNLKKLMENKKAIVHLDLIAGLPFEDFLSFKKSLDRTILYFADEVQL 331

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
             L + KGT        +       P   V  + +   + I  
Sbjct: 332 GFLKMLKGTKIRNEATKYNYEFFKDPPYEVISNSFISFEEIYK 374


>gi|291524546|emb|CBK90133.1| radical SAM protein, TIGR01212 family [Eubacterium rectale DSM
           17629]
          Length = 302

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 15/226 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC              N   S   ++   R+    +S       +F   T +      
Sbjct: 41  CLYCS----AGGSGDFAANRNLSIKEQLSAAREKVASKSSCEHFIAYFQAFTNTYAPIDY 96

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I     +     S   ++I           +    +    +   I LG+Q++ + +L
Sbjct: 97  LRRIF---YEAIEDPSVAVLSIGTRTDCFSAEIYDLLSELNSIKPVWIELGLQTIHQCTL 153

Query: 146 RFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +   H    + I      R    ++   LI  LP +T       +       +  + L
Sbjct: 154 DAMN-THTCVEDFIIVTDELRRRGIKVIAHLILGLPHETRGMMLESVDFVAKSGIFGVKL 212

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             L + KGT    M+      L + +   D             +  
Sbjct: 213 QLLHVLKGTPLADMYIKQPFELFTLDDYCDFVVDCIERLPKDMVIH 258


>gi|325681387|ref|ZP_08160913.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus
           albus 8]
 gi|324106877|gb|EGC01167.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus
           albus 8]
          Length = 443

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 18/221 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +   +++  +   ++  L E +W+ +      ++ +       +     
Sbjct: 156 CSNNCTYCAIPAIRGKFRSRK---MEDILEEARWLAE----NGVTELVVIAQDTTRYGED 208

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                 +  +L  + K          T+ + P  +           +  V  I + +Q  
Sbjct: 209 IYGKSKLPELLRELCKIDGFKWIR--TLYSYPERISEEFIDVLASEEKLVKYIDMPIQHC 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
               LR + R  N +  +  I   R   P +     LI   P +T  Q+E   +   +  
Sbjct: 267 NGDVLRSMNRPGNEAFLLELISKLRARIPDIVLRTTLIAGFPGETEAQFEELCEFVKNVG 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
            + L  +  + E+GT  + M    D         + +    
Sbjct: 327 FERLGCFAYSPEEGTKAFSMEGQVDEQTKERRADIIMREQM 367


>gi|301058656|ref|ZP_07199657.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300447220|gb|EFK10984.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 495

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C   ++   +       +     E++ + +L   R +          +    +
Sbjct: 214 CYYRCRFC---TYHWLFPRVHYRSLDVLREELKAVNELGFVRHVRFTD---DNFTARNDR 267

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
             A++   I + ++   +      A    +     +  R++G   + LG++S  ++ L  
Sbjct: 268 IKAVLEMMIREKFSFKWSSFARASA----LTPELVKLMRQSGCEFLDLGLESGSQKILDN 323

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  ++ ++  A+ +  +         I   P +T   +   +       + +   Y  
Sbjct: 324 MDKRLSSKQSFEAVRMLNDHGIVSRGSFIIGYPGETRGTFFETIDFINESGLPYYQPYLF 383

Query: 208 TIEKGTLFYKMHKDGDL 224
                TL ++  ++  L
Sbjct: 384 YYTANTLVHQEREERKL 400


>gi|298373586|ref|ZP_06983575.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274638|gb|EFI16190.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 417

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 16/193 (8%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC   F +  +         + +    +    +      ++   FG G+     
Sbjct: 152 CNYYCTYCTIPF-ARGKSRSASVAVTMDTIRRAIAEGAREIILTGVNIGDFGNGSS---- 206

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                  +D +     ++  V   I    P+ +E +  +    +        + +QS   
Sbjct: 207 ----ERFIDLVRNIDDMTDEVRFRISSVEPNLLEDDIIRLIAHSRRIAPHFHIPLQSGSN 262

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R +        +   +++ P   +  D+I  +  +T   ++  +Q        
Sbjct: 263 RVLELMQRRYTREIFAQKVATIKSLMPHAFIGVDVIVGMRGETPDMFDETVQFLAETPFS 322

Query: 201 HLSLYQLTIEKGT 213
            L ++  +  +GT
Sbjct: 323 ELHIFPYSEREGT 335


>gi|262277765|ref|ZP_06055558.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HIMB114]
 gi|262224868|gb|EEY75327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HIMB114]
          Length = 435

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 79/232 (34%), Gaps = 13/232 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C     V  Y  G E F +     +  +  LT   +   +  G    +     
Sbjct: 159 CDKFCKFC-----VVPYTRGPE-FSRDHNKILDEILSLTDNGTKEIVLLGQNVSAYKNND 212

Query: 88  -NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A ++  IAK   V      T  ++P+  +      + +    + ++ L VQS  ++ 
Sbjct: 213 ISLARLIKKIAKINNVKRIRFTT--SHPNDFDQELISLFGEEPKLMPQLHLPVQSGSDKI 270

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + RNH  S+ +  I          + S D I   P +T       +           
Sbjct: 271 LKLMNRNHTRSDYLNLIEKFRKEKSDIQFSSDFIVGFPGETNEDHLDTINLVKEVKFSLS 330

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
             +  +   GT    + +  + +       +      Q I   H +  +E S
Sbjct: 331 YSFIYSQRPGTPATNLSELDNNISQKRLEELQGLLFKQQIEFNHSMINHENS 382


>gi|262202141|ref|YP_003273349.1| RNA modification enzyme, MiaB family [Gordonia bronchialis DSM
           43247]
 gi|262085488|gb|ACY21456.1| RNA modification enzyme, MiaB family [Gordonia bronchialis DSM
           43247]
          Length = 528

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 71/232 (30%), Gaps = 21/232 (9%)

Query: 28  CVKKCPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C +C           V R        + + + +      L G +++++       P
Sbjct: 183 CNNTCTFCIVPSLRG--KEVDRRPGDILAEVTALVDQGVLEVTLLG-QNVNAYGMSFADP 239

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            L  P++     D +     +     +     +P+    +      +      ++ + +Q
Sbjct: 240 EL--PRDRGAFADLLRACGRIDGLERVRFTSPHPAEFTDDVIDAMAQTPNVCPQLHMPLQ 297

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ LR + R++  +  +  +    A      ++ D+I   P +T   +   L     
Sbjct: 298 SGSDRVLRAMRRSYRRTRFLGILDKVRAAMPHAAITTDIIVGFPGETEEDFAETLDVVEQ 357

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                   +Q +   GT    M            V  + Y    ++     L
Sbjct: 358 ARFSSAFTFQYSPRPGTPAATMPDQ-----VPPEVVSERYQRLIALQERICL 404


>gi|331004160|ref|ZP_08327640.1| hypothetical protein HMPREF0491_02502 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411570|gb|EGG90980.1| hypothetical protein HMPREF0491_02502 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 372

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 64/189 (33%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R      E +  S    ++            +    GG     EP+
Sbjct: 85  CKNDCYYCG----IRHSNRNCERYRLSEEEILE-CADEGYALGYRTFVMQGGEDGKFEPE 139

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I  I+  I   +      ++ +  +    +  ++Q    AG +R  L  ++ +++    
Sbjct: 140 YICGIVRKIKAKYK-----DVAVTLSLGEYDKESYQKMYDAGADRYLLRHETADKEHYEK 194

Query: 148 LG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L  +  +    +  +   ++I  ++    +   P Q+      +L+    +A +   +  
Sbjct: 195 LHPKTMSFENRMNCLKDLKDIGFQVGCGFMVGSPYQSSATLAKDLKFIEEFAPEMCGIGP 254

Query: 207 LTIEKGTLF 215
                 T+F
Sbjct: 255 FIPHHDTVF 263


>gi|256820597|ref|YP_003141876.1| MiaB-like tRNA modifying enzyme [Capnocytophaga ochracea DSM 7271]
 gi|256582180|gb|ACU93315.1| MiaB-like tRNA modifying enzyme [Capnocytophaga ochracea DSM 7271]
          Length = 435

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + I++ +   + +        + + +  G    G   +
Sbjct: 151 CDYKCTYC---TIPMARGISRSDTIENIIANAKKISDKGIKEIVLTGVNIGDYGKGEFGN 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                    ++  + K   +      +IE  P+ ++          K+ V    + +QS 
Sbjct: 208 KKHEHTFLELVQALDKVEGIERLRISSIE--PNLIKDETIDFIAQSKSFVPHFHIPLQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     ++ +   R + P   +  D+I   P +T   +           
Sbjct: 266 SNEILKKMKRRYLRELYVSRVAKIREVMPDACIGVDVIVGFPGETDEHFLETYYFLNDLD 325

Query: 199 VDHLSLYQLTIEKGT 213
           + +L ++  +    T
Sbjct: 326 ISYLHVFTYSERDNT 340


>gi|258517396|ref|YP_003193618.1| biotin synthase [Desulfotomaculum acetoxidans DSM 771]
 gi|257781101|gb|ACV64995.1| biotin synthase [Desulfotomaculum acetoxidans DSM 771]
          Length = 321

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 13/194 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C + C YC  + +   Y    E +       ++   +      I   S+   G     + 
Sbjct: 62  CSEDCKYCAQSVY---YHTEVEEYPLHDSDRLKKDAKYNQQMGILRYSVVTSGKR---LS 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I  + +       + +   I++ A+   +    F+  + AGV R    +++      
Sbjct: 116 NREIEELCESYR---NIKTTCGISLCASHGLLSFEQFKKLKNAGVARYHNNLETSRRNF- 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H   + I AI  A+     +    I  L  +TM      +    +  +  + + 
Sbjct: 172 PNICTTHTYDDKINAIKAAQQAGLEVCSGGIMGL-GETMEDRIDMVMDIRNLGISSVPVN 230

Query: 206 QLTIEKGTLFYKMH 219
            L   KGT F  + 
Sbjct: 231 ILNPIKGTPFEHLP 244


>gi|240146460|ref|ZP_04745061.1| radical SAM domain protein [Roseburia intestinalis L1-82]
 gi|257201406|gb|EEU99690.1| radical SAM domain protein [Roseburia intestinalis L1-82]
          Length = 367

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 69/226 (30%), Gaps = 30/226 (13%)

Query: 4   LSAYENNMTGQGSNSLG--VYVH--WPF---CVKKCPYCDF---NSHVRRYKVGQENFIQ 53
           +   +      G    G  VY+     F   C   C YC     N H  RY++ +E  + 
Sbjct: 53  IQDLKQRARNTGDRIYGKNVYIRGLIEFTNYCKNDCLYCGIRRSNCHADRYRLTEEEILS 112

Query: 54  SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN 113
                     ++       +    GG       + I  I+  I   +      +  +  +
Sbjct: 113 CC--------KIGYELGFCTFVLQGGEDGFYTDEKICQIVSKIKAEYP-----DCAVTLS 159

Query: 114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI----AAIHLARNIFP 169
                  ++Q Y   G +R  L  ++ +E   + L   H    +       +   + I  
Sbjct: 160 IGEKSRESYQAYFDVGADRYLLRHETADEAHYKKL---HPVEMSYQNRMRCLRDLKEIGY 216

Query: 170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +     +   P QT+     +LQ         + +     +K T F
Sbjct: 217 QTGCGFMVGSPYQTVDTLWEDLQFIRRLKPQMVGIGPFIPQKDTPF 262


>gi|225387767|ref|ZP_03757531.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme
           DSM 15981]
 gi|225046128|gb|EEG56374.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme
           DSM 15981]
          Length = 491

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 32/246 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI------SSIFFGGGTP 81
           C + C YC            +    +  L E++ +        +      SS       P
Sbjct: 154 CNQFCSYC---IIPYARGRVRSRRPEEVLEEVRTLAAQGYKEMVLTGIHLSSYGLDFENP 210

Query: 82  -SLIEPQNIAL---------ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG- 129
            S +   +            +L  I +   V     I +    P  +         K   
Sbjct: 211 ESALIAGDYKAEENALYRPWLLRLIQEVSGVEGIGRIRLGSLEPRIITREFAAELAKIPK 270

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQ 186
                 L +QS  + +L+ + R++N  E      + R  F    ++ D+I   P +T  +
Sbjct: 271 LCPHFHLSLQSGCDATLKRMNRHYNTEEYRERCGILREAFDNPAITTDVIVGFPGETEEE 330

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +    Q       + +  Y++ + K   + +       V+P +         +  +    
Sbjct: 331 FAATRQYL-----EQVHFYEMHVFK---YSRREGTRAAVMPDQVPEPVKAERSDKLLELE 382

Query: 247 GLHAYE 252
              + E
Sbjct: 383 KRMSRE 388


>gi|222099263|ref|YP_002533831.1| Biotin synthase [Thermotoga neapolitana DSM 4359]
 gi|254811599|sp|B9KBR9|BIOB_THENN RecName: Full=Biotin synthase
 gi|221571652|gb|ACM22464.1| Biotin synthase [Thermotoga neapolitana DSM 4359]
          Length = 279

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPS 82
           C + C +C     +N+ V+RY +  E  I      ++  ++     ++   I   G  P+
Sbjct: 20  CDQDCKFCAQSSLYNTGVKRYPLLDEESI------LEKAKEAEKMGAVRFGIVTSGKRPT 73

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                    +L   +    +     + I A+  ++E +     +  G++R    +++   
Sbjct: 74  R------DELLKIASIIEFLKVTTSLRICASLGTLEKDELSYLKDHGLDRYHHNLET-SP 126

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              + +   H   + +  +  A++I   +    I+ +  ++        +      VD +
Sbjct: 127 GFFQNICTTHTFYDRVKTVENAKSIGLEVCSGGIFGV-GESFEDRLELARILKDLEVDSV 185

Query: 203 SLYQLTIEKGTLFYKMH 219
            +  L   KGT F    
Sbjct: 186 PINFLIPIKGTPFENFP 202


>gi|188589895|ref|YP_001921976.1| radical SAM domain protein [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188500176|gb|ACD53312.1| putative cobalamin-dependent enzyme [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 554

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 64/227 (28%), Gaps = 26/227 (11%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLI 84
           C   C YC    SH  R+ +  E  ++     +    +L     R+ +            
Sbjct: 183 CPFNCKYCLSSTSHGVRF-LSIERVLKELQYFIDKKVRLVKFVDRTFNCNHK-------F 234

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
                  +++   +            E +   ++    +   KA   R     GVQ+  +
Sbjct: 235 SMAIWKFLIESNTETK-------FHFEISADILKEEEIKLLSKAPKGRFQFEVGVQTTND 287

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R  N  +    +         +    DLI  LP +    +            +
Sbjct: 288 KVLNNINRFVNFEDIKEKVDELM-AIKNIQQHLDLIAGLPGENYESFVNSFNDVYKIRPE 346

Query: 201 HLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + L  L + KG+      + ++      P   +          +  
Sbjct: 347 EIQLGFLKLLKGSSMREEAEKYEMKFSPYPPYEILKTDCINYDELLK 393


>gi|158523033|ref|YP_001530903.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158511859|gb|ABW68826.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 386

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANP-SSVEVNNFQGYRKAGVNRISLGVQSLE 141
           ++ P ++  I+  +   +     V     ++    +  +     R+AG+NRI +G++S  
Sbjct: 125 ILPPDDLIDIVKHLHSRFPWIQRVTSYARSHTVRRIPEDKLAEIRQAGLNRIHIGLESGS 184

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAV 199
           ++ L  + +    ++ + A    +     +S  ++  L     +                
Sbjct: 185 DKVLELVKKGVTKADHVEAGQKVKAAGFELSEYVMPGLGGVALSTEHAAESADALNRINP 244

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
           D + L  L +  G   ++ ++
Sbjct: 245 DFIRLRTLAVPPGLPLHEEYR 265


>gi|319745347|gb|EFV97661.1| TIGR01212 family radical SAM protein [Streptococcus agalactiae ATCC
           13813]
          Length = 311

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HAKLEI 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       + I I   P  +         +        + LG+Q+  E +   +
Sbjct: 100 IKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R + P++     LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKKTVKRVRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +   T   + + +G L L S+    D  ++          H   I  H   G    H
Sbjct: 220 LLHLMTNTRMQRDYHEGRLRLLSQE---DYISIICDQLEIIPKH---IVIHRITGDAPRH 273

Query: 266 NL 267
            L
Sbjct: 274 ML 275


>gi|319899903|ref|YP_004159631.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
 gi|319414934|gb|ADV42045.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
          Length = 439

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   + S + + +      G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGTVASMVEQARQ-AVADGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
               ++  +     +      +IE  P+ +     +     +  +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDGVEGIERYRISSIE--PNLLTDEIIEYVAGSRRFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + I   + + P   +  D+I     +T   +E   Q   S  V  L 
Sbjct: 273 KLMRRRYDTALFASKIRRIKEVMPDAFIGVDVIVGTRGETEEYFEQAYQFIGSMDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|312793952|ref|YP_004026875.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181092|gb|ADQ41262.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 535

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 83/228 (36%), Gaps = 18/228 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFAPLEKVFEELDYL----FKKEVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S + ++  E +P+ ++ +       +  N  R+ +G+QS  +Q+L
Sbjct: 215 RAIKIIEFCKQK---SQSTQVHFEIDPTLLDDDFIDAINTSEDNLFRLEIGLQSFNQQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R ++       +         +   DLI  LP +    ++  L + + Y  D + L
Sbjct: 272 DAIDRFYDIDRIDKNLKKLMENKKAIVHLDLIAGLPYEDFLSFKRSLNKTILYFADEVQL 331

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
             L + KGT   +    +       P   V  + +   + I     + 
Sbjct: 332 GFLKMLKGTKIREEATKYNYEFFKDPPYEVISNSFISFEEIYKLKKME 379


>gi|150006722|ref|YP_001301465.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
 gi|149935146|gb|ABR41843.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
          Length = 444

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + Q + +  G + I       G       +
Sbjct: 160 CDYYCSYC---TIPFARGRSRNGTIASMVEQAQEVAR-KGGKEIVLTGVNIGDFGKSTDE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F  + K       + +QS  +  L+ 
Sbjct: 216 TFIDLIRALDEVDGIVRYRISSIEPNLITDEAIDFVAHSKRFAPHFHIPLQSGSDAVLQL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I   + + P   +  D+I     +T   +E   Q   S  +  L ++
Sbjct: 276 MRRRYDTALFRHKIEKIKEVMPHAFIGVDVIVGTRGETDEYFEEARQFIGSLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|323483779|ref|ZP_08089159.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
           WAL-14163]
 gi|323402970|gb|EGA95288.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
           WAL-14163]
          Length = 436

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 82/242 (33%), Gaps = 21/242 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLI 84
           C + C YC            +   I   + E++ +        + +   +   G      
Sbjct: 153 CNQFCSYC---IIPYTRGRVRSRAIGDVVKEVEGLAAAGYKEIVLTGIHLSSYGVDFPEE 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + +N+  ++  + K   +      ++E  P  +                   L +QS   
Sbjct: 210 KRENLLSLITCLDKIQGIERIRLGSLE--PRIITEEFVSALAGLKSICPHFHLSLQSGCN 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            +L  + R++ A E +    + R  F    ++ D+I   P +T+ +++   +   +    
Sbjct: 268 ATLARMNRHYTAQEYLERCVILRKHFDNPAITTDVIVGFPGETVEEFDETKRFLETVRFY 327

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            + +++ +  +GT         +  +P ++ +V    L            Y     SFLG
Sbjct: 328 EMHIFKYSKREGT----RAAVMENQVPEQDKSVRSDILL--TLEHKMSDEYR---ESFLG 378

Query: 261 AE 262
            E
Sbjct: 379 KE 380


>gi|309792068|ref|ZP_07686542.1| radical SAM domain-containing protein [Oscillochloris trichoides
           DG6]
 gi|308225875|gb|EFO79629.1| radical SAM domain-containing protein [Oscillochloris trichoides
           DG6]
          Length = 608

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 11/191 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC       R+       ++  L E+ W R+    R I  +         +  
Sbjct: 202 FCPYTCSYC----LYGRHSEQTSFSLERVLAEIAWGRE----RGIERVHLVEAN---LNL 250

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           Q I   L                 E     V+  +      A V  + +G+QS    +LR
Sbjct: 251 QPIFWPLMHALAELNADRQQTFYAELRAEYVDAASVAALVAANVTVVEVGLQSANPAALR 310

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            + R+ +     A +         +  D+I  LP        +      ++ + H   + 
Sbjct: 311 AIRRHTDLERWAAGVERLMAAGIEVLLDVILGLPGDDAAGVALTRAFLHAHGLAHYDTFM 370

Query: 207 LTIEKGTLFYK 217
           L +  GT   +
Sbjct: 371 LQVLPGTRLRR 381


>gi|291301633|ref|YP_003512911.1| RNA modification enzyme, MiaB family [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570853|gb|ADD43818.1| RNA modification enzyme, MiaB family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 495

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P     +      +     +++ + +QS  +  L+ + R++   + +  I    A 
Sbjct: 239 TSPHPKDFTDDVIDAMAETPNVCHQLHMPLQSGSDTVLKGMRRSYRREKYLGIIDKVRAA 298

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
                ++ D+I   P +T   +E  L             +Q +I  GT    M
Sbjct: 299 MPDAAITTDIIVGFPGETEADFEDTLDVVRKARFSGAFTFQYSIRPGTPAATM 351


>gi|301111844|ref|XP_002905001.1| CDK5 regulatory subunit-associated protein 1 [Phytophthora
           infestans T30-4]
 gi|262095331|gb|EEY53383.1| CDK5 regulatory subunit-associated protein 1 [Phytophthora
           infestans T30-4]
          Length = 624

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 34/213 (15%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISS------- 73
            P    C+  C YC      R  +    ++  ++ ++  Q +          S       
Sbjct: 198 IPLSTGCLGACTYC----KTRHARGKLGSYTPEAIVSRAQTVINEGVTEIWLSSEDTGAY 253

Query: 74  -IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--- 129
            I  G   P+L+       +L+       V   + + +        +++     +     
Sbjct: 254 GIDIGTDLPTLM-----RKLLEV------VPDGIMLRVGMTNPPYILDHLDAIAEVLNHE 302

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMT 185
              + + + VQS  +  L  + R + A E        LA+     ++ D+I   P +T  
Sbjct: 303 RVYSFLHVPVQSGSDDVLLAMNREYTAGEFRRVADELLAKVPDLTLATDIICGFPTETEE 362

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            ++  ++    Y    +++ Q     GT   KM
Sbjct: 363 HFDETMELVDKYRFHIMNISQFYPRPGTPAAKM 395


>gi|85860271|ref|YP_462473.1| coproporphyrinogen oxidase (NAD) [Syntrophus aciditrophicus SB]
 gi|85723362|gb|ABC78305.1| coproporphyrinogen oxidase (NAD) [Syntrophus aciditrophicus SB]
          Length = 496

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 4/163 (2%)

Query: 83  LIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           +++P+ +A +++ I   +       V            + + +    AG+NR+  GV+S 
Sbjct: 230 ILKPEFLATVVNEIKSRFPSIKRFTVYGRTRTAARQRSLADLRAMAAAGLNRVHFGVESG 289

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYA 198
            ++ L F+ +  +++E +      +      S  ++  L     +        +   + A
Sbjct: 290 SDRVLAFMNKGESSAEHVEGCLKIKEAGLSCSVYIMPGLGGTELSEEHATETARVINAAA 349

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
            D + L  L I   T   K  KDG+     E   +    +  S
Sbjct: 350 PDFVRLRTLEIFPQTPLEKALKDGEFEECPEEQIIRELRIMIS 392


>gi|298377685|ref|ZP_06987636.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
 gi|298265388|gb|EFI07050.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
          Length = 444

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + Q + +  G + I       G       +
Sbjct: 160 CDYYCSYC---TIPFARGRSRNGTIASMVEQAQEVAR-KGGKEIVLTGVNIGDFGKSTDE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F  + K       + +QS  +  L+ 
Sbjct: 216 TFIDLIRALDEVDGIVRYRISSIEPNLITDEAIDFVAHSKRFAPHFHIPLQSGSDAVLQL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I   + + P   +  D+I     +T   +E   Q   S  +  L ++
Sbjct: 276 MRRRYDTALFRHKIEKIKEVMPHAFIGVDVIVGTRGETDEYFEEARQFIGSLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|297566746|ref|YP_003685718.1| MiaB-like tRNA modifying enzyme [Meiothermus silvanus DSM 9946]
 gi|296851195|gb|ADH64210.1| MiaB-like tRNA modifying enzyme [Meiothermus silvanus DSM 9946]
          Length = 443

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 40/115 (34%), Gaps = 5/115 (4%)

Query: 111 EANPSSVEVNNFQGYRKAGVN---RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              P        +   +        + L +Q+  ++ L+ +GR ++ +     + +A  +
Sbjct: 231 SIEPEDTGRELLEVIARYAPRVRPHLHLSLQTGSDRLLKLMGRRYDTTYYRELVQMAYAL 290

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
            P  +   D+I  LP +T  + +  L          +  +  T    T    + +
Sbjct: 291 IPGFALTTDVIAGLPTETEAEHQETLALLRELRPSRVHAFTYTPRPKTRAASLPQ 345


>gi|255323492|ref|ZP_05364623.1| 2-methylthioadenine synthetase [Campylobacter showae RM3277]
 gi|255299529|gb|EET78815.1| 2-methylthioadenine synthetase [Campylobacter showae RM3277]
          Length = 415

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 38/234 (16%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW 61
           YL A E  +     ++   Y+     C +KC +C   +   + K       ++    +  
Sbjct: 101 YLQASEERVIT--GSNYHAYIKISEGCNQKCSFCAIPTFKGKLKS------RALENIVDE 152

Query: 62  MRQLTGPRSISSIFFGGGTPSLIE------------PQNIALILDGIAKNWTVSSNVEIT 109
           +++L           G    S +                +  ++D + K   V +   + 
Sbjct: 153 VQKLVKK--------GYYDFSFLSQDSSSYMRDHAVSDGLISLIDAVEKIEGVKTARILY 204

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL---A 164
           +   PS+      +    +   VN   + +Q   E+ L+ + R   A      ++L   A
Sbjct: 205 L--YPSTTSNALIERIIASRVFVNYFDMPIQHSSEKMLKIMRRGSGAVRIKELLNLMKKA 262

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              F R     I   P ++  +++        +  D +S +  + E+ TL Y+M
Sbjct: 263 PGAFLRTGV--IVGHPGESEAEFDELCAFLQEFKFDRVSAFAYSKEEDTLSYEM 314


>gi|184201228|ref|YP_001855435.1| putative tRNA-thiotransferase [Kocuria rhizophila DC2201]
 gi|229890554|sp|B2GKH0|MIAB_KOCRD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|183581458|dbj|BAG29929.1| putative tRNA-thiotransferase [Kocuria rhizophila DC2201]
          Length = 513

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 83/227 (36%), Gaps = 17/227 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +   +   +V     C   C +C     V + +  +++  +     +
Sbjct: 151 LESLETFPSALPTKREQAYAGWVSISVGCNNTCTFC----IVPQLRGKEKD--RRPGDIL 204

Query: 60  QWMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             +R L    ++     G    S      +    A +L    +   +          +P+
Sbjct: 205 AEVRALVDSGAVEVTLLGQNVNSYGVEFGDRGAFAKLLRACGEIEGLERIRF--TSPHPA 262

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    + ++ + +QS  ++ L+ + R++ ++  +  +   R+  P   +
Sbjct: 263 AFTDDVIDAMAETPNVMPQLHMPLQSGSDRILKRMRRSYRSTRFLGILDRVRDRIPDAAI 322

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + D+I   P +T   ++  L    +        +Q +I  GT   +M
Sbjct: 323 TTDIIVGFPGETEQDFQDTLDVVAASEFSSAFTFQYSIRPGTPAGEM 369


>gi|145594823|ref|YP_001159120.1| radical SAM domain-containing protein [Salinispora tropica CNB-440]
 gi|145304160|gb|ABP54742.1| Radical SAM domain protein [Salinispora tropica CNB-440]
          Length = 634

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 29/229 (12%)

Query: 29  VKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
              C +C  N S ++        F+   L   +  +                   L++  
Sbjct: 281 KHHCTFCGLNGSFMQFRSKSPARFLDELLDLARRHQ-------------------LLDFI 321

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-----SVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +  ILD    +  +    E   +         ++  ++FQ    AG  ++  GV++L  
Sbjct: 322 VVDNILDMAYFDSVLRWLAESEYDLRLHFEVKANLRRHHFQQLSDAGAVQVQPGVENLSS 381

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAV 199
             LR + +     + + A+  A++     S++ +Y  P +T         +L        
Sbjct: 382 NVLRLMDKGVTGCQNVRALRDAQSAGVTASWNYLYGFPGETAQDYTSVLAQLPALHHLEP 441

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              S  ++ IE+ + ++   + G   L       ++Y L ++  +    
Sbjct: 442 PISST-RIAIERYSPYFDRPELGFASLRPAPQYAEIYRLPETELADLAY 489


>gi|328718445|ref|XP_001945556.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1-like
           [Acyrthosiphon pisum]
          Length = 522

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 86/259 (33%), Gaps = 30/259 (11%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        +  +Q  +             S  +  +G    + + 
Sbjct: 206 CLNQCTYCK-TKHARGNLGSYPPDEIVQRAIESFNEGAVELWLTSEDTGAYGLDIQTNL- 263

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  ++        +     + I        +N+ +   K          + + VQS 
Sbjct: 264 PELLWRLVAI------IPEGCMMRIGMTNPPYILNHLEEIAKILSHPRVYAFLHVPVQSG 317

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             Q L  + R ++  E    ++  R   P +S   D+I   P +T   +   +     Y 
Sbjct: 318 SNQVLADMKREYSIEEFETVVNFLRQRVPGVSIATDIICGFPTETEEDFSETMSVCEKYK 377

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA-------Y 251
              L + Q    KGT   +M K     +P++ V +    LT+   S              
Sbjct: 378 FPSLFINQFYPRKGTPAARMPK-----IPTDMVKIRTKRLTELFHSYTTYDHRIGEIQEI 432

Query: 252 EISNHSFLGAESL-HNLNY 269
            I+  +  G E + HN  Y
Sbjct: 433 LITEEAKNGIEFIGHNKYY 451


>gi|297621456|ref|YP_003709593.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
 gi|297376758|gb|ADI38588.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
          Length = 433

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 57/192 (29%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC     +   R +       Q        +        ++ I  G       E
Sbjct: 148 CNSFCTYC----IIPYVRGRSRSRTMGQVLEEVKDLIANGYKEIVLTGINIGDFDGGADE 203

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           P+ +A ++  +     +          +P  V+    +           + + +QS    
Sbjct: 204 PRRLAELVKEVDAVPGLERLR--VSSIDPDEVDDEMLETIINGKKTCRSMHIVLQSGSNV 261

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +     +  +   R+     +F  D+I   P +T    +  L+         
Sbjct: 262 VLKRMNRKYTRQMFMDTVSRLRSACSDFTFTTDVIVGFPGETERDHQETLEVLQEVQFAK 321

Query: 202 LSLYQLTIEKGT 213
           + ++  +    T
Sbjct: 322 VHMFPYSPRPRT 333


>gi|296129399|ref|YP_003636649.1| RNA modification enzyme, MiaB family [Cellulomonas flavigena DSM
           20109]
 gi|296021214|gb|ADG74450.1| RNA modification enzyme, MiaB family [Cellulomonas flavigena DSM
           20109]
          Length = 538

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 65/202 (32%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     V   +  + +  +     +  +  L    +I     G    S     
Sbjct: 187 CNNTCTFC----IVPHLRGKERD--RRPGDVLAEVEALVATGAIEVTLLGQNVNSYGVGF 240

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +      +L  +     +          +P++   +  +        + ++ + +QS  
Sbjct: 241 GDRHAFGKLLRAVGAVPGLERVRF--TSPHPAAFTDDVIEAMAATPTVMPQLHMPLQSGS 298

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R++ A   +  +   R   P   ++ D+I   P +T   +   L+   +   
Sbjct: 299 DRVLRAMRRSYRADRFLGILERVRAAIPHAAITTDVIVGFPGETEEDFRETLRVVEASRF 358

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
                +Q +   GT    +   
Sbjct: 359 SSAFTFQYSPRPGTPAADLPDQ 380


>gi|318042484|ref|ZP_07974440.1| hypothetical protein SCB01_12282 [Synechococcus sp. CB0101]
          Length = 473

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C  +C +C     +   +  Q    I+S + E Q +        +  S I    G    +
Sbjct: 168 CDYRCAFC----IIPHLRGDQRSRTIESIVAEAQQLAAQGVKELVLISQITTNYG----L 219

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           +      + + +     V         A P+ +     + YR+    +  + L +Q    
Sbjct: 220 DLAGKPQLAELLRALGEVEIPWIRVHYAYPTGLTEAVLEAYREVPNVLPYLDLPLQHSHP 279

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
           + LR + R   A      +   R   P        I   P +T   ++  L        D
Sbjct: 280 EVLRAMNRPWQADVTGGVLRRIREQLPDAVLRTTFIVGYPGETEEHFQHLLDFVAEQRFD 339

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
           H+ ++  + E+GT   ++   
Sbjct: 340 HVGVFTFSPEEGTPAAELPDQ 360


>gi|255016549|ref|ZP_05288675.1| putative Fe-S oxidoreductase [Bacteroides sp. 2_1_7]
          Length = 444

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 6/189 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + Q + +  G + I       G       +
Sbjct: 160 CDYYCSYC---TIPFARGRSRNGTIASMVEQAQEVAR-KGGKEIVLTGVNIGDFGKSTDE 215

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  + +   +      +IE N  + E  +F  + K       + +QS  +  L+ 
Sbjct: 216 TFIDLIRALDEVDGIVRYRISSIEPNLITDEAIDFVAHSKRFAPHFHIPLQSGSDAVLQL 275

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R ++ +     I   + + P   +  D+I     +T   +E   Q   S  +  L ++
Sbjct: 276 MRRRYDTALFRHKIEKIKEVMPHAFIGVDVIVGTRGETDEYFEEARQFIGSLDISQLHVF 335

Query: 206 QLTIEKGTL 214
             +   GT 
Sbjct: 336 SYSERPGTQ 344


>gi|169823747|ref|YP_001691358.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 29328]
 gi|167830552|dbj|BAG07468.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 29328]
          Length = 302

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS--SIFFGGGTPSLIEPQN 88
           KC YCD N   +++KV     I+     ++  +     +  +        G    ++   
Sbjct: 32  KCIYCDLN-VGKKFKVFD---IEDVKKYIRDRKDFYEDKRFTPKKFTLLEGNALCLKNDY 87

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +  IL  I KN    +   ++  +    +     N     +  G++RI +G++S  +  L
Sbjct: 88  LTEILKEIKKN--FPNMKYVSCFSRSDDILRKTDNELLELKNLGLDRICVGIESGSDWVL 145

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
            +  +   + E + A+H   N+  + S  ++  L  +  +        +         + 
Sbjct: 146 SYHKKGVTSQEQLTALHRLDNLGIKYSVYIMLGLGGEAHSREHVMKTAEFLNKVNPFEIV 205

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +  L + K     +  ++ D    S    +    +     +   ++
Sbjct: 206 VVNLVLFKNAKLIENVRNQDFKRVSIRQQIIEEIMLVQNLNKRCIY 251


>gi|307264932|ref|ZP_07546494.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306920190|gb|EFN50402.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 436

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 77/243 (31%), Gaps = 26/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     + + +     +    + ++    +    +    +       +     
Sbjct: 154 CSNACSFC----IIPKIRG---RYRSRKMEDILREAEELVKKGAKELILIAQDTTKYGVD 206

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   +       + A P SV     +  +     V  I + +Q  
Sbjct: 207 VYKKFMLPQLLKEISKIDGLKWIR--LLYAYPDSVTEELVEEIKNNEKIVKYIDIPLQHS 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ + RN N  +    I   R+I    +    +   P +T  ++E   Q       
Sbjct: 265 HDEVLKRMNRNTNRQKIEEVISRLRSIPNMVIRTTFMVGFPGETEEEFEDLKQFVKEKRF 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + + ++  + E+GT  Y M          +NV +        I            N S +
Sbjct: 325 ERVGVFTYSREEGTKSYYMKPQIK-----KNVKIKRQQELMEIQKEISYQH----NLSKI 375

Query: 260 GAE 262
           G +
Sbjct: 376 GKQ 378


>gi|257468233|ref|ZP_05632329.1| 2-methylthioadenine synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062515|ref|ZP_07927000.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
 gi|313688191|gb|EFS25026.1| radical SAM domain-containing protein [Fusobacterium ulcerans ATCC
           49185]
          Length = 445

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C ++C YC      +     +   I+  L E  + +       ++        G    L 
Sbjct: 155 CDRRCTYC---IIPQLRGKLRSRTIEDILKEANKLVASGVKELNLLAQETTEYGID--LY 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + +++A ++  + K   +       +   P S+        +          + VQ + +
Sbjct: 210 KEKSLARLMKELVKIDGLKWLRTYYM--FPDSLTDELIDVMKNEDKICKYFDIPVQHISD 267

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR  +       ++  R   P       +I   P +T   +E        Y  D
Sbjct: 268 NILQQMGRAKSGDHIKGILNRIRKEIPDAVIRTAVIVGFPGETEENFEELKAFIEEYKFD 327

Query: 201 HLSLYQLTIEKGTLFYKM 218
           ++ +++ + E+ T  Y M
Sbjct: 328 YVGVFKYSREEDTKAYDM 345


>gi|326203733|ref|ZP_08193596.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325986173|gb|EGD47006.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 558

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/262 (11%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 25  WPF-----CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            P+     C  KC +C  + + R   +G E  +++   ++  +      +    +     
Sbjct: 282 IPYIFNFNCPYKCAFCTQSDYDRGSVIGGE--VENVFNDITTLMDKYNTKYFYFLN---- 335

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIE--ANPSSVEVNNFQGYRKAGVNRISLGV 137
                   N ++          +    +      A  +++     +  RKAG  +++ G 
Sbjct: 336 -----NAFNYSVEFSNSFCRKVIHEGTKFYWSDCARFNNMTYERLELMRKAGCIKLTFGF 390

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           ++   + L  + +  + S +   +     +      ++I  LP++T   ++         
Sbjct: 391 ETGSPKILNLIDKKLDISHSEQVLKWCHELGIWADIEIIVGLPQETAEDFKYTYDYIEKN 450

Query: 198 A--VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              +++  + +  +   +L  K  +   + L         Y   + +   +  +      
Sbjct: 451 REYINYFWVNEYFVVPNSLIGKYPERYGIKLM------KDYTGYEELLKNNRNY------ 498

Query: 256 HSFLGAESLHNLNYWRYGDYIG 277
            S  G  S  N   + + +  G
Sbjct: 499 FSKEGQISTKNAKLYGFNELEG 520


>gi|254776064|ref|ZP_05217580.1| hypothetical protein MaviaA2_15530 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 490

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           V R        ++S +
Sbjct: 131 LQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRG--KEVDRSPDDILAEVRSLV 188

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPS 115
            +      L G +++++       P+L   +   A +L    +   +          +P+
Sbjct: 189 ADGVLEVTLLG-QNVNAYGVSFADPALPRDRGAFARLLRACGEIDGLERVRF--TSPHPA 245

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P   +
Sbjct: 246 EFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERFLGIIDRVRAAMPHAAI 305

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           + DLI   P +T   +   L             +Q +   GT 
Sbjct: 306 TTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTP 348


>gi|41408944|ref|NP_961780.1| hypothetical protein MAP2846c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|81413559|sp|Q73W15|MIAB_MYCPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|41397303|gb|AAS05163.1| hypothetical protein MAP_2846c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 517

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           V R        ++S +
Sbjct: 158 LQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRG--KEVDRSPDDILAEVRSLV 215

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPS 115
            +      L G +++++       P+L   +   A +L    +   +          +P+
Sbjct: 216 ADGVLEVTLLG-QNVNAYGVSFADPALPRDRGAFARLLRACGEIDGLERVRF--TSPHPA 272

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P   +
Sbjct: 273 EFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERFLGIIDRVRAAMPHAAI 332

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           + DLI   P +T   +   L             +Q +   GT 
Sbjct: 333 TTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTP 375


>gi|332297280|ref|YP_004439202.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Treponema
           brennaborense DSM 12168]
 gi|332180383|gb|AEE16071.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Treponema
           brennaborense DSM 12168]
          Length = 470

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 64/203 (31%), Gaps = 17/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ--ENFIQSF-------LTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC    +VR  +V +   + +          + E+  + Q             G
Sbjct: 174 CNNFCTYC-IVPYVRGREVSRSPADILSELDQLSAHNVREITLLGQNVNSYRWDCNAETG 232

Query: 79  GTPSLIEPQNIALILDGIAKN-WTVSSNVEIT--IEANPSSVEVNNFQGYRKAGV--NRI 133
              +     +   ++  IA +    +S +     + ++P  +         +  V    I
Sbjct: 233 AAETGDSAVDFPALVQLIADHLRKTASPIGWVRFMSSHPKDLSDRLIDVIAREPVLCRHI 292

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L VQ      LR + R +   + +  +   R   P  S   D++   P +    +E  +
Sbjct: 293 HLPVQHGSSDVLRRMNRRYTREQYLDLVSRIRTKLPDASLTTDILIGFPGENDADFEQTV 352

Query: 192 QRALSYAVDHLSLYQLTIEKGTL 214
               S       +Y     +GT 
Sbjct: 353 SLMESVRYQAAYMYYYNPREGTP 375


>gi|134098330|ref|YP_001103991.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291004251|ref|ZP_06562224.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Saccharopolyspora erythraea NRRL 2338]
 gi|229890638|sp|A4FAJ1|MIAB_SACEN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|133910953|emb|CAM01066.1| methylase of isopentenylated A37 derivatives in tRNA
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 491

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P     +      +     +++ + +QS  ++ L+ + R++ +   +  +   R  
Sbjct: 234 TSPHPRDFTDDVIAAMAETPNVCHQLHMPLQSGSDRVLKQMRRSYRSQRYLDILRKVREA 293

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   ++ D+I   P +T   +E  +Q            +Q +   GT   +M
Sbjct: 294 MPDAAITTDIIVGFPGETEEDFEATMQVVREARFASAFTFQYSKRPGTPAAEM 346


>gi|21674771|ref|NP_662836.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66
           kDa subunit [Chlorobium tepidum TLS]
 gi|13899149|gb|AAG12414.1| BchE [Chlorobaculum tepidum]
 gi|21647985|gb|AAM73178.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66
           kDa subunit [Chlorobium tepidum TLS]
          Length = 546

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       ++F+ E++    L     +         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KNFVDEIEI---LVKKYKVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      +V   I    + +  + +    YRKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|328950305|ref|YP_004367640.1| MiaB-like tRNA modifying enzyme [Marinithermus hydrothermalis DSM
           14884]
 gi|328450629|gb|AEB11530.1| MiaB-like tRNA modifying enzyme [Marinithermus hydrothermalis DSM
           14884]
          Length = 436

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 80/256 (31%), Gaps = 25/256 (9%)

Query: 28  CVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGTPSL 83
           C   C YC     + R   +        +       +R       ++ +  G   G P  
Sbjct: 148 CNAGCAYC----IIPRLRGRERHRAHTDALAEAEALLRTGVQEIVLTGVRLGSYAGHPRG 203

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN---RISLGVQSL 140
           +    +   L  +     +SS         P   +    +   +        + L +Q+ 
Sbjct: 204 L--AGLVEDLVALGAKVRLSS-------IEPEDTDTALLEVIARHAPQVRPHLHLSLQTG 254

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L+ +GR ++ +     +  A ++ P  +   D+I  LP +T  + +  L       
Sbjct: 255 NDRLLKLMGRRYDKAYYRDLVRRAYDLIPGFALTTDVIAGLPTETEAEHQETLAFLEELQ 314

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDL--VLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              +  +  T    T   ++ +         +  +    + L  +          E+   
Sbjct: 315 PVRVHAFTYTPRPKTRAARLPQVPVEVRKRRTRELIALAHELAAARIRPKLGTRVEVLVE 374

Query: 257 SFLGAESL-HNLNYWR 271
              G E+L H  +Y+ 
Sbjct: 375 RIRGDEALGHTPDYYE 390


>gi|325479080|gb|EGC82180.1| iron-only hydrogenase maturation rSAM protein HydE [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 347

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E + +    E+    +L       +    GG        
Sbjct: 55  CKNDCYYCG----IRKSNDRVERY-RLTKEEIISCARLGYQLGYRTFVLQGGEDGHFSDD 109

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  I+  I +        ++ I  +       +++   +AG +R  L  ++ ++     
Sbjct: 110 IVVDIVKSIKEIHD-----DVAITLSLGERSYESYKRLFEAGADRYLLRQETSDKDHYEK 164

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +      A+   + I  ++    +   P QT      +L+         + +  
Sbjct: 165 LHPESMSFENRRKALRDLKEIGFQVGGGFMVGSPYQTTESLIKDLRFLEELEPAMIGIGP 224

Query: 207 LTIEKGTLFYKMHK 220
              +  T F     
Sbjct: 225 YMTQHDTPFKDFPN 238


>gi|297617227|ref|YP_003702386.1| MiaB-like tRNA modifying enzyme YliG [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145064|gb|ADI01821.1| MiaB-like tRNA modifying enzyme YliG [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 442

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 85/258 (32%), Gaps = 22/258 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC          + +  F    L+++    Q      I  +       ++    
Sbjct: 156 CDNRCSYCA-------IPLIRGPFRSRPLSDILEEAQKLAGLGIKELVLVAQDTTMYGQD 208

Query: 88  -NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGY-RKAGVN-RISLGVQSLEE 142
               L L  + +N +    +E    + A+P  V     +   R+ GV   + L +Q  ++
Sbjct: 209 LEKNLSLALLLQNLSRIEGIEWIRVMYAHPLHVTPEMVEVIGREPGVIPYLDLPIQHADD 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ +GR ++ S  ++ I   R   P +     ++   P ++ + +E           D
Sbjct: 269 SVLKRMGRGYSRSYLVSLIEDLRRRLPGLVLRTTVMVGFPGESESSFENLCSFVKETGFD 328

Query: 201 HLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            L  +  + E+GT   +      + +       +      +T  +         +I    
Sbjct: 329 WLGAFMYSEEEGTAAARWEDDVLEEEKQRRWREIMRMQSAITSELNRRRTGKVEQI---- 384

Query: 258 FLGAESLHNLNYWRYGDY 275
            L         YW  G Y
Sbjct: 385 -LVEGCTGPGVYWGRGYY 401


>gi|295695076|ref|YP_003588314.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
 gi|295410678|gb|ADG05170.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
          Length = 602

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 78/268 (29%), Gaps = 32/268 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C             ++ ++ F L  ++          +S I F   T + ++ 
Sbjct: 185 CPFHCQFC---------LSSIDDAVRYFSLQRVKEDLARLIDYGVSQIKFVDRTFN-LKK 234

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQ 143
                +   +A+    +       E     + +   +        G  R  +GVQS  E+
Sbjct: 235 DYALELFQFLARYPGRT---VFQFEITADILRLEIVEFLAAEAPPGRFRFEIGVQSTNEE 291

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + R + R          +   R     +   DLI  LP++    +        +   D L
Sbjct: 292 TNRLIRRIQRFDRLAGTVRRLRESGRVVQHLDLIAGLPREDYRSFRKTFDDVYALEPDEL 351

Query: 203 SLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVD---LYNLTQSITSAHGL-HAYEISN 255
            L  L + +GT             +  P   V  +    Y   + I     +   Y  S+
Sbjct: 352 QLGFLKLLRGTGLRARAAEFGYVYMDEPPYEVLANDVLPYEDVRRIKRVEDMVDKYWNSH 411

Query: 256 HSFLGAESLH-------NLNYWRYGDYI 276
                   L           Y   GDY 
Sbjct: 412 WMDHTLRYLRAWEFSSAFDLYQELGDYW 439


>gi|257451909|ref|ZP_05617208.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|317058460|ref|ZP_07922945.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
 gi|313684136|gb|EFS20971.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_5R]
          Length = 298

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 74/222 (33%), Gaps = 7/222 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C             +   Q    ++Q + +      + + +F   T +  +   +  
Sbjct: 42  CIFCSEEGSGEFSGDRHKKIYQQIEDQLQLISKKFPSGKVIA-YFQNFTNTYADIPYLKK 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           + +    +  V     + I   P  +  +  Q   K        I LG+Q++ E+   F 
Sbjct: 101 VYEEALSHPRVMG---LAIATRPDCLGEDVLQLLDKMNQKTFLWIELGLQTVNEEVATFF 157

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +  S    A    +    R    ++  LPK+           A       + ++ L 
Sbjct: 158 HRGYPLSVYTKACDDLKKYRIRFVTHILLGLPKEKEEDGLKTALYAQECGTWGIKIHCLY 217

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
           ++K T   +++K+ ++ +  ++  V          S + +  
Sbjct: 218 VQKNTYLEQLYKNHEIKIQKKDEFVKKVVTILENLSYNIVIH 259


>gi|322419363|ref|YP_004198586.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320125750|gb|ADW13310.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 346

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 74/230 (32%), Gaps = 27/230 (11%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C + C YC     N    RY++  E  +      + +         +       G    
Sbjct: 48  YCARSCAYCGLRLDNKGAARYRMTDEEILACAHEGVAY----GYGTVVLQSGEDYG---- 99

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           I  + I+ ++  + +   ++      +  +    E    + +R+AG +R  L  ++    
Sbjct: 100 ISAERISGLVRRLKEETPLA------VTLSLGEREDAELKAWREAGADRYLLRFETSN-- 151

Query: 144 SLRFLGRNHNA-----SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             R   R H       S+  A +   R++   +   ++  +P Q+      +++   +  
Sbjct: 152 -RRLYDRIHPPLPGRSSDRFALLGRLRDMGYEIGSGVMVGIPGQSFEDLAGDIEMFRTLD 210

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           +D + +        T        G   LP          +T    +   L
Sbjct: 211 LDMIGVGPFIPHPATPLG--VAAGVPKLPDSEQVPGGELMTYKTMALARL 258


>gi|240103390|ref|YP_002959699.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
 gi|239910944|gb|ACS33835.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
          Length = 581

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 38/242 (15%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG--TPSLI-------- 84
           C F +   RYK  ++  ++  + E++ +  L     +     G      S +        
Sbjct: 219 CSFCTEPVRYKTVEDRPVEDVVAEVKALYDLG----VRHFRVGRQSCIFSYMARPNGRVP 274

Query: 85  --EPQNIALILDGIAKNWT-----VSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISL 135
              P  I  +  GI             N    + AN     V   +   K G   N ++ 
Sbjct: 275 VPNPDVIEKLFAGIRSVAPDVKTLHVDNANPAVIANYPEESVRIAKALIKYGTPGNVVAF 334

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS----------FDLIYALPKQTMT 185
           G++S + +  +    N  A E   A+ +   +  +             ++I+ LP +T  
Sbjct: 335 GLESADPKVAKLNNLNATAEETYEAVKILNEVGAKRGYNGMPWLLPGINIIFGLPGETKK 394

Query: 186 QWEMELQRALSYAVD-----HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +E+  Q       D      +++ Q+ +  GT  + M            +    + +  
Sbjct: 395 SYEITFQFLKRLLDDGLMVRRINIRQVVVFPGTPLWHMRSKVKTEKHKRLIQHYRHKIRH 454

Query: 241 SI 242
            I
Sbjct: 455 EI 456


>gi|222529742|ref|YP_002573624.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456589|gb|ACM60851.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 535

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 80/223 (35%), Gaps = 18/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFMPLEKVFEELDYL----FKKQVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S   +I  E +P+ ++ +       +  +  R+ +G+QS   Q+L
Sbjct: 215 RAIKIIEFCKQK---SQTTQIHFEIDPTLLDNDIISAINNSKDDLFRLEIGIQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R ++  +    +         +   DLI  LP +    ++  L + + Y  D + L
Sbjct: 272 DAIDRFYDIDKIDKNLKKLMENKKAIVHLDLIAGLPYEDFLSFKRSLDKTILYFADEVQL 331

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
             L + KGT        +       P   V  + +   + I  
Sbjct: 332 GFLKMLKGTKIRNEATKYNYEFFKDPPYEVISNSFISFEEIYK 374


>gi|183981993|ref|YP_001850284.1| hypothetical protein MMAR_1979 [Mycobacterium marinum M]
 gi|229890404|sp|B2HL08|MIAB2_MYCMM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB 2; AltName: Full=tRNA-i(6)A37 methylthiotransferase
           2
 gi|183175319|gb|ACC40429.1| conserved hypothetical protein [Mycobacterium marinum M]
          Length = 532

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 74/227 (32%), Gaps = 25/227 (11%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           + R        +QS +
Sbjct: 152 LQQFPSSLPSARESAYAAWVSISVGCNNTCTFCIVPSLRG--KEIDRSPADILAEVQSLV 209

Query: 57  T----EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-E 111
                E+  + Q      +S        P+L  P+N     + +     +     +    
Sbjct: 210 DTGVVEITLLGQNVNAYGVSF-----ADPAL--PRNRGAFAELLRACGDIDGLERVRFTS 262

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P
Sbjct: 263 PHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIERVRAAMP 322

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ DLI   P +T   +   L             +Q +   GT 
Sbjct: 323 HAAITTDLIVGFPGETEQDFAATLDVVRQARFSAAFTFQYSKRPGTP 369


>gi|182417590|ref|ZP_02948912.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237667727|ref|ZP_04527711.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182378545|gb|EDT76074.1| radical SAM domain protein [Clostridium butyricum 5521]
 gi|237656075|gb|EEP53631.1| putative cobalamin-dependent enzyme [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 566

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 6/148 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAA 160
            +  +   E +   ++    +   KA   R     GVQ+  ++ LR + R  N S     
Sbjct: 255 DTETQFHFEISADILKDEEIEILSKAPEGRFQFEVGVQTTNDEVLRNINRFVNFSHIKEK 314

Query: 161 IHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF---Y 216
           +     I   +   DLI  LP +    ++       S   + + L  L + KG+      
Sbjct: 315 VEELMAIKNIKQHLDLIAGLPGEDYISFKKSFNDVYSIRPEEIQLGFLKLLKGSSMREEA 374

Query: 217 KMHKDGDLVLPSENVAVDLYNLTQSITS 244
             +       P   +        + +  
Sbjct: 375 NRYGMEYSPYPPYEILKTDMVSYEEMLK 402


>gi|119868239|ref|YP_938191.1| RNA modification protein [Mycobacterium sp. KMS]
 gi|229890568|sp|A1UEZ3|MIAB_MYCSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|119694328|gb|ABL91401.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium sp. KMS]
          Length = 529

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 8/135 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +  +   +       + + +QS  ++ LR + R++ A + +  I   R  
Sbjct: 266 TSPHPAEFTDDVIEAMAETPNVCPALHMPLQSGSDRILRAMRRSYRAEKYLGIIDRVRAA 325

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P   ++ DLI   P +T   ++  L    +        +Q +   GT    M       
Sbjct: 326 IPDAAITTDLIVGFPGETEEDFQATLDVVAASRFSSAFTFQYSKRPGTPAADMPG----Q 381

Query: 226 LPSENVAVDLYNLTQ 240
           LP   V+     L +
Sbjct: 382 LPKAVVSERYQRLIE 396


>gi|118618695|ref|YP_907027.1| hypothetical protein MUL_3378 [Mycobacterium ulcerans Agy99]
 gi|229890570|sp|A0PT87|MIAB_MYCUA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|118570805|gb|ABL05556.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 532

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 74/227 (32%), Gaps = 25/227 (11%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           + R        +QS +
Sbjct: 152 LQQFPSSLPSARESAYAAWVSISVGCNNTCTFCIVPSLRG--KEIDRSPADILAEVQSLV 209

Query: 57  T----EMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-E 111
                E+  + Q      +S        P+L  P+N     + +     +     +    
Sbjct: 210 DTGVVEITLLGQNVNAYGVSF-----ADPAL--PRNRGAFAELLRACGDIDGLERVRFTS 262

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P
Sbjct: 263 PHPAEFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIERVRAAMP 322

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ DLI   P +T   +   L             +Q +   GT 
Sbjct: 323 HAAITTDLIVGFPGETEQDFAATLDVVRQARFSAAFTFQYSKRPGTP 369


>gi|126434730|ref|YP_001070421.1| RNA modification protein [Mycobacterium sp. JLS]
 gi|229890567|sp|A3PYF3|MIAB_MYCSJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|126234530|gb|ABN97930.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium sp. JLS]
          Length = 526

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 8/135 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +  +   +       + + +QS  ++ LR + R++ A + +  I   R  
Sbjct: 263 TSPHPAEFTDDVIEAMAETPNVCPALHMPLQSGSDRILRAMRRSYRAEKYLGIIDRVRAA 322

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P   ++ DLI   P +T   ++  L    +        +Q +   GT    M       
Sbjct: 323 IPDAAITTDLIVGFPGETEEDFQATLDVVAASRFSSAFTFQYSKRPGTPAADMPG----Q 378

Query: 226 LPSENVAVDLYNLTQ 240
           LP   V+     L +
Sbjct: 379 LPKAVVSERYQRLIE 393


>gi|108799124|ref|YP_639321.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           sp. MCS]
 gi|123178924|sp|Q1BA19|MIAB_MYCSS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|108769543|gb|ABG08265.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mycobacterium sp. MCS]
          Length = 525

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 8/135 (5%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +  +   +       + + +QS  ++ LR + R++ A + +  I   R  
Sbjct: 262 TSPHPAEFTDDVIEAMAETPNVCPALHMPLQSGSDRILRAMRRSYRAEKYLGIIDRVRAA 321

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P   ++ DLI   P +T   ++  L    +        +Q +   GT    M       
Sbjct: 322 IPDAAITTDLIVGFPGETEEDFQATLDVVAASRFSSAFTFQYSKRPGTPAADMPG----Q 377

Query: 226 LPSENVAVDLYNLTQ 240
           LP   V+     L +
Sbjct: 378 LPKAVVSERYQRLIE 392


>gi|259507456|ref|ZP_05750356.1| tRNA-I(6)A37 thiotransferase [Corynebacterium efficiens YS-314]
 gi|259164944|gb|EEW49498.1| tRNA-I(6)A37 thiotransferase [Corynebacterium efficiens YS-314]
          Length = 533

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 65/199 (32%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C     V   +  +++             + Q     ++          + ++
Sbjct: 189 CNNTCTFC----IVPSLRGKEQDRRPGDILAEVQALVDQGVSEVTLLGQNVNAYGVNFVD 244

Query: 86  PQ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P+        + +L        +          +P+    +      +      ++ + +
Sbjct: 245 PELERDRSAFSKLLRACGDIEGLERVRF--TSPHPAEFTSDVIDAMAETPNICPQLHMPL 302

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R++ +++ +A +    A+     ++ D+I   P +T   ++  L    
Sbjct: 303 QSGSDRVLKEMRRSYRSAKFLAILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVE 362

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    +Q +   GT 
Sbjct: 363 KARFTSAYTFQYSPRPGTP 381


>gi|229890689|sp|Q8FPD5|MIAB_COREF RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 524

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 65/199 (32%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C     V   +  +++             + Q     ++          + ++
Sbjct: 180 CNNTCTFC----IVPSLRGKEQDRRPGDILAEVQALVDQGVSEVTLLGQNVNAYGVNFVD 235

Query: 86  PQ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P+        + +L        +          +P+    +      +      ++ + +
Sbjct: 236 PELERDRSAFSKLLRACGDIEGLERVRF--TSPHPAEFTSDVIDAMAETPNICPQLHMPL 293

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R++ +++ +A +    A+     ++ D+I   P +T   ++  L    
Sbjct: 294 QSGSDRVLKEMRRSYRSAKFLAILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVE 353

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    +Q +   GT 
Sbjct: 354 KARFTSAYTFQYSPRPGTP 372


>gi|229890683|sp|Q7VGP6|MIAB_HELHP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 462

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 100/299 (33%), Gaps = 37/299 (12%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y+ A    M  +   ++ +      C KKC YC   F +  +   V ++  I      + 
Sbjct: 128 YVFASSQGMGIKAHLNISI-----GCDKKCSYCIVPF-TRGKEISVPKDLLISEAKKCVA 181

Query: 61  WMRQ----LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
              +    L    +   + F    P      N   +L  +++   +          +P  
Sbjct: 182 SGAKELLLLGQNVNNYGVRFSHSHP----KTNFTQLLRALSEIDGLYRIRF--TSPHPLH 235

Query: 117 VEVNNFQGYRKAGVNR--ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF- 173
           ++    + +    V    I + +QS   Q L+ + R ++    +  I   +++ P +   
Sbjct: 236 MDDEFLEEFASNPVIAKGIHIPLQSGSSQILKMMRRGYDKQWYLNRIAKLKSLVPNVGIG 295

Query: 174 -DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D+I   P ++   +E  ++       D L  +  +    T  ++           +   
Sbjct: 296 TDIIVGFPTESEQDFEDTMEVLSLVEFDTLYSFVYSPRPHTSAFE----------YDKSM 345

Query: 233 VDLYNLTQSITSAHGLHAYEI-SNHSFLGAESLHNL----NYWRYGDYIGIGPGAHSRV 286
           +    + +   +       EI S  + L    +HN+    +Y   G     G  + +++
Sbjct: 346 LVSPEVAKERLARLQNLHKEILSKKAQLEIGRIHNVLIENHYNGEGQCWSEGRSSSNKL 404


>gi|25028399|ref|NP_738453.1| hypothetical protein CE1843 [Corynebacterium efficiens YS-314]
 gi|23493684|dbj|BAC18653.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 600

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 65/199 (32%), Gaps = 18/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C     V   +  +++             + Q     ++          + ++
Sbjct: 256 CNNTCTFC----IVPSLRGKEQDRRPGDILAEVQALVDQGVSEVTLLGQNVNAYGVNFVD 311

Query: 86  PQ------NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           P+        + +L        +          +P+    +      +      ++ + +
Sbjct: 312 PELERDRSAFSKLLRACGDIEGLERVRF--TSPHPAEFTSDVIDAMAETPNICPQLHMPL 369

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           QS  ++ L+ + R++ +++ +A +    A+     ++ D+I   P +T   ++  L    
Sbjct: 370 QSGSDRVLKEMRRSYRSAKFLAILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVE 429

Query: 196 SYAVDHLSLYQLTIEKGTL 214
                    +Q +   GT 
Sbjct: 430 KARFTSAYTFQYSPRPGTP 448


>gi|315652513|ref|ZP_07905497.1| Fe-S oxidoreductase [Eubacterium saburreum DSM 3986]
 gi|315485229|gb|EFU75627.1| Fe-S oxidoreductase [Eubacterium saburreum DSM 3986]
          Length = 459

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 5/136 (3%)

Query: 90  ALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
             +L+ I     V     I I    P  ++ +  +             L +QS  +++L+
Sbjct: 232 NELLNLIENISEVDGIERIRIGSLEPRIIKEDFIKSLGNIDKFCPHFHLSLQSGCDKTLK 291

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R ++  E    + + R  F    ++ D+I   P ++   +E               +
Sbjct: 292 SMNRKYSVDEFYKGVEIIRKYFDSPAITTDIIVGFPGESKLDFEESKNFIEKVKFYETHI 351

Query: 205 YQLTIEKGTLFYKMHK 220
           +  +I +GT    M +
Sbjct: 352 FPYSIREGTKAANMPQ 367


>gi|313906284|ref|ZP_07839628.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
 gi|313468904|gb|EFR64262.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
          Length = 293

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 71/230 (30%), Gaps = 15/230 (6%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
              C +C   ++ +  K  +    +      +  +    P+ I      G         +
Sbjct: 27  HNHCLFC---TYFKDQKFRKSTIEEIEEDIKEIPKYFGSPKRIFLQGADGY------AAD 77

Query: 89  IALILDGIAKNWTVSSNVE-ITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +++       T   +VE I   A   +         +     G +   +GV+S ++  
Sbjct: 78  YDVLMKTAELLHTYVPSVETIGGYARIDNFYDKTEEQLRDMAAVGFSNPYIGVESGDDVV 137

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDHL 202
           L+ + + +NA++A   +            + +         +   ++  +         +
Sbjct: 138 LKKINKGYNAAQAREQLEKIDASGLTYIVNFLNGAGGHGYGLQNAQLTAKLYDGLHPTMV 197

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           +   LT+  GT  Y+  + G     +E   ++         +   +   E
Sbjct: 198 NTSMLTVVPGTPLYRAMEKGLYAESTEMEKLEEIYELVKCLTNDTIFMNE 247


>gi|300867339|ref|ZP_07111996.1| Radical SAM domain protein [Oscillatoria sp. PCC 6506]
 gi|300334645|emb|CBN57162.1| Radical SAM domain protein [Oscillatoria sp. PCC 6506]
          Length = 471

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 89/243 (36%), Gaps = 40/243 (16%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM---------RQLTGPRSISSIFFGG 78
           C   C +C   S  +  K      +   L E++ +           L G    +S  F G
Sbjct: 170 CPHHCDFCYKESFFKGGKSFYTQTVDHALAEIERLPGKHLFFLDDHLFGDVRFASALFDG 229

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ 138
                         L G+ + W  +  V   ++        +  +   ++G+  + +G +
Sbjct: 230 --------------LKGMGRVWQAAGTVHAILQ-------PDLLEKAVESGLRSLFVGFE 268

Query: 139 SLEEQSLRFLGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +L   +LR   + HN +    AAI    ++   ++   ++ + +   T ++  ++ A++ 
Sbjct: 269 TLNSVNLREQHKYHNLNRDYSAAIRRLHDMGVMINGSFVFGMDEDDETVFDTTVEWAVNN 328

Query: 198 AVDHLSLYQLTIEKGTLFYKM--------HKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++  + + LT   GT  Y+         H + DL   + NV      +T  +  +    
Sbjct: 329 GIETATFHILTPYPGTDLYQRMDAEKRIDHHNWDLY-DTRNVVFKPKKMTPEVLESGYWR 387

Query: 250 AYE 252
           AY 
Sbjct: 388 AYR 390


>gi|168186677|ref|ZP_02621312.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
           [Clostridium botulinum C str. Eklund]
 gi|169295305|gb|EDS77438.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
           [Clostridium botulinum C str. Eklund]
          Length = 590

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAA 160
            +N +   E + + +  N F    +A   R+    GVQ+   + LR + R  N  +    
Sbjct: 276 DTNTKFHFEISANILTENQFNVLSRAPKGRLQFEVGVQTTNNEILRNINRYVNFEDMEEK 335

Query: 161 IHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +   + +   +S   DLI  LP + +  +        S   + + L  L + KG+  
Sbjct: 336 VEEIKKL-NNISQHLDLIAGLPGENLKSFINSFNDVYSIKPEEIQLGFLKLLKGSPM 391


>gi|149199462|ref|ZP_01876497.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
 gi|149137397|gb|EDM25815.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
          Length = 437

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 19/230 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C            +   +++    ++  R L G      +  G    +     
Sbjct: 159 CDFMCTFC---IIPMARGRSRSRDMENL---LEEARTLIGQGFREIVITGVNVATY--DS 210

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQ 143
                LD I +   +     I I    P+++    F          V  + + +QS  ++
Sbjct: 211 QGRTFLDVIDRLNELEGIERIRISSIEPTTIPEKIFDYMADPNHALVPYLHIPLQSGSDK 270

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +   E +  I +A    P +    D++  +  +   ++E      +   V++
Sbjct: 271 VLKIMKRRYERQEFLDFIKMASERVPDLCIGTDVMVGMCGEDEKEFEDTCDFLIKSPVNY 330

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
             ++  +   GT   KM +                ++ ++I+    L  Y
Sbjct: 331 FHVFTFSERDGTPAVKMEEKV-----HPKEKSHRSSVLRAISERKRLKFY 375


>gi|325925030|ref|ZP_08186452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas perforans
           91-118]
 gi|325544542|gb|EGD15903.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas perforans
           91-118]
          Length = 470

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 15/196 (7%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------FFGGGTPSL 83
           C  YC F      R +     F    +   Q   Q  G R I+ +      + G      
Sbjct: 176 CSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQ--GVREINLLGQNVNAYRGAYGADA 233

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
            +    A +   I     +     I     +P     +    YR      N + L VQ+ 
Sbjct: 234 GDAAQYADLGLLIRTIAQIDGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANYLHLPVQAG 293

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + I   R + P +S   D I   P +T   +E  ++      
Sbjct: 294 SDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDVG 353

Query: 199 VDHLSLYQLTIEKGTL 214
            D    +  +   GT 
Sbjct: 354 FDQSFSFVYSRRPGTP 369


>gi|237785694|ref|YP_002906399.1| 2-methylthioadenine synthetase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758606|gb|ACR17856.1| 2-methylthioadenine synthetase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 509

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 67/199 (33%), Gaps = 10/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM--QWMRQL-TGPRSISSIFFGGGTPSLI 84
           C   C +C   S   + K  +   I + +  +    + ++    +++++       P+L 
Sbjct: 143 CNNTCTFCIVPSLRGKEKDRRPGDILAEVQTLVDDGVSEVTLLGQNVNAYGVHFEDPTLE 202

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   + +L        +          +P+    +      +      ++ + +QS  
Sbjct: 203 RDRSAFSKLLRACGDIEGLERVRF--TSPHPAEFTSDVIDAMAETHNVCPQLHMPLQSGS 260

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++     +  +   R       ++ D+I   P +T   ++  L        
Sbjct: 261 DKVLKEMRRSYRTKRFMRILDEVREKLPQASITTDIIVGFPGETEEDFQQTLDLVEKARF 320

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +   GT    M
Sbjct: 321 TSAYTFQYSPRPGTPAAAM 339


>gi|55821622|ref|YP_140064.1| hypothetical protein stu1646 [Streptococcus thermophilus LMG 18311]
 gi|55823550|ref|YP_141991.1| hypothetical protein str1646 [Streptococcus thermophilus CNRZ1066]
 gi|116628335|ref|YP_820954.1| radical SAM superfamily protein [Streptococcus thermophilus LMD-9]
 gi|55737607|gb|AAV61249.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55739535|gb|AAV63176.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
 gi|116101612|gb|ABJ66758.1| Radical SAM superfamily enzyme [Streptococcus thermophilus LMD-9]
 gi|312278961|gb|ADQ63618.1| Radical SAM superfamily enzyme [Streptococcus thermophilus ND03]
          Length = 314

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 14/207 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYHEIDFMHRKWPEVHKYLVYFQNFTNT---HAPLEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR----ISLGVQSLEEQSLRF 147
           I D   +       V I I   P  +  +      +   +R    + LG+Q+  E++   
Sbjct: 100 IKDRYEQAINEPGVVGINIGTRPDCLPDDVIDYLAEL-TDRMHVTVELGLQTTYEETSEL 158

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
           + R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L
Sbjct: 159 INRAHSYELYVETVKRLRERAPKAEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKL 218

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + L +   T   + + +G L L S+  
Sbjct: 219 HLLHLMTNTRMQRDYHEGGLKLLSQEE 245


>gi|332882828|ref|ZP_08450439.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332679330|gb|EGJ52316.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 435

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 69/195 (35%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + I++ L+  + +        + + +  G    G   +
Sbjct: 151 CDYKCTYC---TIPMARGISRSDTIENILSNAKKISDKGIKEIVLTGVNIGDYGKGEFGN 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    +++ + K   +      +IE  P+ ++        ++   V    + +QS 
Sbjct: 208 KKHEHTFLELVEALDKVEGIERLRISSIE--PNLIKDETIDFIAQSNSFVPHFHIPLQSG 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     ++ +   R + P   +  D+I   P +T   +           
Sbjct: 266 SNEILKKMKRRYLRELYVSRVAKIREVMPDACIGVDVIVGFPGETDELFLETYYFLNDLD 325

Query: 199 VDHLSLYQLTIEKGT 213
           + +L ++  +    T
Sbjct: 326 ISYLHVFTYSERDNT 340


>gi|282881461|ref|ZP_06290135.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304687|gb|EFA96773.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
          Length = 455

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I   + + +      G   + + +  G    S    
Sbjct: 174 CNYFCTYC---TIPFARGFSRNPSIDFLVKQAEQAAAEGGKEIVLTGVNIGEFGES--TN 228

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           +    ++  + +   +      ++E  P  ++          +A +    + +QS  ++ 
Sbjct: 229 ETFLDLVKALDQVQGIKRFRISSLE--PDLIDDELIDYCAHSRAFMPHFHIPLQSGSDEV 286

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R+++ +     I   +   P   +  D++     +    +E   Q      V  L
Sbjct: 287 LQLMHRHYDTALFAHKILYIKEKIPDAFIGVDVMVGSRGEKPEYFEACYQFLKQLDVTQL 346

Query: 203 SLYQLTIEKGT 213
            ++  +   GT
Sbjct: 347 HVFPYSERPGT 357


>gi|254881037|ref|ZP_05253747.1| SAM/TRAM family methylase [Bacteroides sp. 4_3_47FAA]
 gi|319640044|ref|ZP_07994771.1| hypothetical protein HMPREF9011_00368 [Bacteroides sp. 3_1_40A]
 gi|254833830|gb|EET14139.1| SAM/TRAM family methylase [Bacteroides sp. 4_3_47FAA]
 gi|317388322|gb|EFV69174.1| hypothetical protein HMPREF9011_00368 [Bacteroides sp. 3_1_40A]
          Length = 456

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 60/197 (30%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C   C YC     +  Y  G+E       + +  +R L           G    S     
Sbjct: 172 CNNFCHYC-----IVPYTRGRERSRD-VESILNEVRDLADKGYKEVTLLGQNVNSYRFEK 225

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           E + I   +        V         ++P  +     Q   +       I L VQS   
Sbjct: 226 EGEIITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQVIAETPNVCKHIHLPVQSGSS 285

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +     +  +   R I P   +S D+      +T    +  L      A D
Sbjct: 286 RILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYHSETEEDHQESLSLMRECAYD 345

Query: 201 HLSLYQLTIEKGTLFYK 217
              +++ +   GT   K
Sbjct: 346 SAFMFKYSERPGTYASK 362


>gi|297587999|ref|ZP_06946643.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 53516]
 gi|297574688|gb|EFH93408.1| oxygen-independent coproporphyrinogen III oxidase [Finegoldia magna
           ATCC 53516]
          Length = 302

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 75/224 (33%), Gaps = 9/224 (4%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC YCD N   +      E+  +       + +         ++  G      ++   + 
Sbjct: 32  KCIYCDLNVGKKFKVFDIEDVKKYICDRKDFYKDKRFTPKKFTLLEGNAL--CLKNDYLM 89

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IL  I KN    +   ++  +    +           +  G++RI +G++S  +  L +
Sbjct: 90  EILKEIKKN--FPNMKYVSCFSRSDDILRKTDAELLELKNLGLDRICIGIESGSDWVLSY 147

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLY 205
             +   ++E + A+H   N+  + S  ++  L  +  +        +         + + 
Sbjct: 148 HKKGVTSNEQLTALHRLDNLGIKYSTYIMLGLGGEEHSREHIMKTAEFLNKVNPFEIVVV 207

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            L + K     +  ++ D    S    +    +     +   ++
Sbjct: 208 NLVLFKNAKLVENVRNHDFKRVSIRQQIIEEIMLVKNLNKRCIY 251


>gi|262066479|ref|ZP_06026091.1| BchE/P-methylase family protein [Fusobacterium periodonticum ATCC
           33693]
 gi|291379811|gb|EFE87329.1| BchE/P-methylase family protein [Fusobacterium periodonticum ATCC
           33693]
          Length = 440

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   S  + Y    +      L  ++++             F    P+ +  +
Sbjct: 177 CPNKCTYC---SVTKMYSGKNQ------LKNIEFVVNEIKSNKYKKWVF--YDPNFLADK 225

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           + A  ++ + +   +      +   N  + ++   Q  + +G   + +G+++  +++L  
Sbjct: 226 SYA--INLMNELKKLKIKWTASATINIGN-DIKMLQLMKDSGCIGLVIGLENFIQENLNG 282

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  +N  E    +   ++    +   L+  +   T+              VD      
Sbjct: 283 VNKGFNNVKEYKRLVSTIQSYGISVLSTLMIGMETDTVESIRQIPDIIEEIGVDVPRYNI 342

Query: 207 LTIEKGTLFYKM 218
           LT   GT FY+ 
Sbjct: 343 LTPYPGTPFYEQ 354


>gi|170781615|ref|YP_001709947.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|229890481|sp|B0RGZ1|MIAB_CLAMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|169156183|emb|CAQ01325.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 530

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  +++  +     +  ++ L    ++     G    S     
Sbjct: 171 CNNTCTFC----IVPALRGKEKD--RRPGDILAEIQALVDDGAVEVTLLGQNVNSYGVEF 224

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +     +L        +          +P++   +      +    + ++ + +QS  
Sbjct: 225 GDRQAFGKLLRAAGAIEGLERIRF--TSPHPAAFTDDVIDAMAETPAVMPQLHMPLQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++ +   +  +   R   P   ++ D+I   P +T   ++  L+   +   
Sbjct: 283 DRILKAMRRSYRSERFLGILDRVRTRVPDAAITTDIIVGFPGETEEDFQETLRVVEAARF 342

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +I  GT    M
Sbjct: 343 SSAFTFQYSIRPGTPAATM 361


>gi|282908895|ref|ZP_06316713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|283958340|ref|ZP_06375791.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|282327159|gb|EFB57454.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|283790489|gb|EFC29306.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           A017934/97]
          Length = 448

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|78065755|ref|YP_368524.1| radical SAM family protein [Burkholderia sp. 383]
 gi|77966500|gb|ABB07880.1| Radical SAM family protein [Burkholderia sp. 383]
          Length = 480

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 88/244 (36%), Gaps = 19/244 (7%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 199 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 257

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 258 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKT---------LKVMKENGLRLL 308

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 309 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 368

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ-SITSAHGLHAYE 252
           A       + +       GT  YK   +   +  ++ + +      Q +      L   E
Sbjct: 369 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRDE 428

Query: 253 ISNH 256
           I +H
Sbjct: 429 IYHH 432


>gi|332884205|gb|EGK04473.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas
           mossii DSM 22836]
          Length = 431

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       +++      I+  +  +  +           + F G      +  
Sbjct: 146 CNRTCSYCSIPIMTGKHQSRPIEEIEEEVRNLVAVGVKEFQVIAQDLSFYGYDN--YKQA 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ IAK   V         A P++   +  +  R+       + + +Q + +  L
Sbjct: 204 KLPELIERIAKIEGVKWIRLHY--AYPANFPYDLLRVMRENDNVCKYLDIALQHVSDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + RN +       +   R   P +     L+   P +T   +E  LQ       + + 
Sbjct: 262 TKMRRNISKQATYDLMKRIREEVPGIHLRTTLMVGHPGETKKDFEELLQFVNDMRFERMG 321

Query: 204 LYQLTIEKGTLFYKMH 219
            +  + E GT  Y  +
Sbjct: 322 AFPYSHEDGTYAYDNY 337


>gi|319790598|ref|YP_004152231.1| MiaB-like tRNA modifying enzyme YliG [Thermovibrio ammonificans
           HB-1]
 gi|317115100|gb|ADU97590.1| MiaB-like tRNA modifying enzyme YliG [Thermovibrio ammonificans
           HB-1]
          Length = 431

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 83/244 (34%), Gaps = 28/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C   C YC            +   +   + E + + +    R +  ++      +     
Sbjct: 146 CSNACTYCA---IPIIRGPLKSRPVNEVVEEAKRLAE----RGVKELYVIAQDTTAYRRD 198

Query: 85  --EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
             E + +  +L+ + K   +       +   PS +  N        +  V  I + +Q +
Sbjct: 199 FGEEKALIKLLEQLEKVEGIEWIR--LMYTYPSHITDNLIDYMASSEKLVKYIDVPLQHI 256

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  +GR +  + A   +   R   P ++     I   P +   ++E        + 
Sbjct: 257 NDKVLASMGRKYTRASAEKLLEKLRLRVPGIAIRTTFIVGFPTEGEAEFEELHTFIKEFK 316

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
            D    ++ + E+GT  Y++   GDL    ++  ++       +        YE  + S 
Sbjct: 317 FDWAGFFKYSREEGTAAYRL---GDLPEELKDSRLN-------LLEETQFWIYEELHRSL 366

Query: 259 LGAE 262
           +G  
Sbjct: 367 VGKR 370


>gi|291549048|emb|CBL25310.1| iron-only hydrogenase maturation protein HydE [Ruminococcus torques
           L2-14]
          Length = 357

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 62/197 (31%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     +R+  +    +    +  L   +   +L       +    GG    
Sbjct: 72  YCRNDCYYCG----IRKSNLNAHRYRLTKEEILNCCKTGYELG----FRTFVLQGGEDGW 123

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +A I+  I KNW      +  I  +   +E + +Q    AG +R  L  ++  + 
Sbjct: 124 FTVPRLADIVSDIHKNWP-----DCAITLSVGEMEHDAYQTLFDAGADRYLLRHETYNDA 178

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             R L     +A      +   ++I  ++    +   P QT      ++          +
Sbjct: 179 HYRKLHPASLSARHRQNCLWDLKSIGYQIGTGFMVGAPFQTTENLADDMLFLKELNPHMV 238

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F    
Sbjct: 239 GIGPFIPHHDTQFASEP 255


>gi|163814699|ref|ZP_02206088.1| hypothetical protein COPEUT_00850 [Coprococcus eutactus ATCC 27759]
 gi|158450334|gb|EDP27329.1| hypothetical protein COPEUT_00850 [Coprococcus eutactus ATCC 27759]
          Length = 373

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     NSHV RY++ ++  +                    +    GG     
Sbjct: 90  CKNDCYYCGIRKSNSHVDRYRLTKDQILAC--------ADEGYVLGFRTFVLQGGEDGGF 141

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               IA I+  I +      +  +T+     S     ++ +R AG +R  L  ++   + 
Sbjct: 142 SDGAIADIVRCIKERH---PDCAVTLSFGEHSY--ETYKLWRMAGADRYLLRHETANRKH 196

Query: 145 LRFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              L     +    +  ++  +++  ++    +   P QT      +L          + 
Sbjct: 197 YERLHPEKMSYDNRVRCLYNLKSLGYQVGSGFMVGSPYQTSVNLAEDLHFLAKLQPQMIG 256

Query: 204 LYQLTIEKGTLFYKM 218
           +      K T F KM
Sbjct: 257 IGPYVPHKETPFAKM 271


>gi|157364894|ref|YP_001471661.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga lettingae TMO]
 gi|238066616|sp|A8F8W3|RIMO_THELT RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|157315498|gb|ABV34597.1| MiaB-like tRNA modifying enzyme YliG [Thermotoga lettingae TMO]
          Length = 430

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 75/229 (32%), Gaps = 17/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C       R+K      I+S  +E++ + ++     +  I       +     
Sbjct: 146 CDRSCTFCSIPLFKGRFKSRS---IESIYSEVERLVEIG----VKEIILVAQDTTAYGVD 198

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLEE 142
                 +   + K  ++  N  I +   +P  +              +    + VQ   +
Sbjct: 199 LYNKAVLDQLLKKLNSIEGNFRIRVMYLHPDHLTDKMIDAICSLDKLLPYFDIPVQHGSD 258

Query: 143 QSLRFLGRNHNASEAIA--AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  N+ + +   A   + N    +   ++   P +T   ++  L        D
Sbjct: 259 RILKQMGRIKNSEQLLELIAYIRSHNPDAAIRTSVMVGFPGETNDDFQKLLDFLEKAKFD 318

Query: 201 HLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
            L  +  + E+GT+     +   +       EN+ +    +        
Sbjct: 319 RLGCFIYSDEEGTVSSSMKRKVSERIARERYENLLIFQSQIAYERLKRF 367


>gi|150003734|ref|YP_001298478.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacteroides
           vulgatus ATCC 8482]
 gi|294777449|ref|ZP_06742900.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides vulgatus
           PC510]
 gi|229890425|sp|A6KZJ2|MIAB_BACV8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|149932158|gb|ABR38856.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|294448517|gb|EFG17066.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides vulgatus
           PC510]
          Length = 456

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 62/198 (31%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E       + +  +R L           G    S    +
Sbjct: 172 CNNFCHYC-----IVPYTRGRERSRD-VESILNEVRDLADKGYKEVTLLGQNVNSY-RFE 224

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I+       TV+  V         ++P  +     Q   +       I L VQS  
Sbjct: 225 KEGEIITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQVIAETPNVCKHIHLPVQSGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R I P   +S D+      +T    +  L      A 
Sbjct: 285 SRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYHSETEEDHQESLSLMRECAY 344

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   K
Sbjct: 345 DSAFMFKYSERPGTYASK 362


>gi|325279490|ref|YP_004252032.1| Ribosomal protein S12 methylthiotransferase rimO [Odoribacter
           splanchnicus DSM 20712]
 gi|324311299|gb|ADY31852.1| Ribosomal protein S12 methylthiotransferase rimO [Odoribacter
           splanchnicus DSM 20712]
          Length = 456

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 69/231 (29%), Gaps = 14/231 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       ++K         F   ++  R L     +  I       +     
Sbjct: 168 CNRTCSYCAIPIMTGKHKSRD------FEELLEECRALVKG-GVKEILVVAQDLTYYGID 220

Query: 88  NI--ALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + I +   +     I +  A P+   +      R+       + + +Q   +
Sbjct: 221 LYGKNRLAELIGRIADIEGLEWIKLHYAYPAGFPLELLTVMRERPNVCKYLDIALQHCSD 280

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R  +  + I  I   R   P +     L+   P +T   +E   +       +
Sbjct: 281 HMLQQMRRGISKKQTIELIRKIRQEVPGIFIRTTLMTGHPGETAEDFEELCEFVREMRFE 340

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
            L ++  + E  T   + ++D          A  +  +   I    G    
Sbjct: 341 RLGVFPYSHEDDTWCDRHYQDDVPEEIKRERAGRIMQIQAGIAEEIGRSQI 391


>gi|313906221|ref|ZP_07839567.1| cobalamin B12-binding domain protein [Eubacterium cellulosolvens 6]
 gi|313468951|gb|EFR64307.1| cobalamin B12-binding domain protein [Eubacterium cellulosolvens 6]
          Length = 579

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 32/203 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP------ 81
           C   C YC                + S   ++++ R L         F   G P      
Sbjct: 201 CPFSCSYC----------------LSSLREKVRF-RSLPKVCEELQFFLDAGVPQVKFVD 243

Query: 82  -SL-IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGV 137
            +     ++   I   I ++    +N     E     +           + G+ ++ +GV
Sbjct: 244 RTFNCNHRHAMGIWQYIREHDNKLTN--FHFEIAADLLTDEEIDFLSTLRPGLVQLEIGV 301

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRAL 195
           QS    +L  + R  N  + + ++         +    DLI  LP + +  +        
Sbjct: 302 QSTNPDTLAAIDRVQN-MDHLRSVTERIRGGKNIHQHLDLIAGLPHEDVVSFRRSFDEVY 360

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
           +       L  L + KG+  ++ 
Sbjct: 361 AMKPQQFQLGFLKVLKGSAMHRR 383


>gi|310658968|ref|YP_003936689.1| ytqa [Clostridium sticklandii DSM 519]
 gi|308825746|emb|CBH21784.1| YtqA [Clostridium sticklandii]
          Length = 304

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 15/215 (6%)

Query: 28  CVKK--------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +        C +C  +     +   +   I+S L     + +   P +   ++F   
Sbjct: 33  CPTRDGFKGYGGCIFCS-SRGSGEFSGDRALPIKSQLKNQISLLKEKWPEAKYIVYFQNF 91

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLG 136
           + +     +I  + +   +     + V + I      ++ +  +  +         + +G
Sbjct: 92  SNTY---ADIKTLKEKYDEALEFDNVVGLAIATRGDCLDEDVIKLLKTYNEKTFLWVEIG 148

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +QS+ + S  F+ R +       AI        R    LI  LP +T   +   L   + 
Sbjct: 149 LQSIHKHSEEFIRRGYGLEAFDRAISALNQNNIRTVTHLILNLPNETKKHYIETLNYLVE 208

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             +  + L+ L I K T     +K     +   + 
Sbjct: 209 KQIWGIKLHMLHILKNTDLESYYKIHPFDIMDADA 243


>gi|229890676|sp|A0QIR4|MIAB_MYCA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 715

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           V R        ++S +
Sbjct: 158 LQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRG--KEVDRSPDDILAEVRSLV 215

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPS 115
            +      L G +++++       P+L   +   A +L    +   +          +P+
Sbjct: 216 ADGVLEVTLLG-QNVNAYGVSFADPALPRDRGAFARLLRACGEIDGLERVRF--TSPHPA 272

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P   +
Sbjct: 273 EFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVRAAMPHAAI 332

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           + DLI   P +T   +   L             +Q +   GT 
Sbjct: 333 TTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTP 375


>gi|228472998|ref|ZP_04057755.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275580|gb|EEK14357.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 438

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 75/234 (32%), Gaps = 19/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + I++ L   + + +      + + +  G    G   +
Sbjct: 152 CDYKCTYC---TIPMARGISRSDTIENILQNAKKISENNIKEIVLTGVNIGDYGKGEFGN 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                    ++  +     +      +IE  P+ ++          ++ V    + +QS 
Sbjct: 209 KKHEHTFLELIQALDTVEGIERLRISSIE--PNLLKDETIAFVAQSRSFVPHFHIPLQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +        +   R + P   +  D+I   P +T   +           
Sbjct: 267 SNDILKKMKRRYLRELYEDRVAKIRELMPDACIGVDVIVGFPGETDEHFLETYHFLNQLD 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +L ++  +    T   +M            V      + + +++    H YE
Sbjct: 327 ISYLHVFTYSERANTEAVEMEGVV-----PSEVRAKRSRMLRGLSAKKRHHFYE 375


>gi|225569892|ref|ZP_03778917.1| hypothetical protein CLOHYLEM_05986 [Clostridium hylemonae DSM
           15053]
 gi|225161362|gb|EEG73981.1| hypothetical protein CLOHYLEM_05986 [Clostridium hylemonae DSM
           15053]
          Length = 579

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 6/143 (4%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     +       + K   G+ ++ +G+QS    +++ + R  +  +A   +   R
Sbjct: 268 FHFEIAADLLNEEELDLFGKMRPGLIQLEIGIQSTNPCTVKEIRRTMDFEKAAHTVRRIR 327

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +        DLI  LP + M  ++       +   D L L  L + KG+   +  +   L
Sbjct: 328 DNGNIHQHLDLIAGLPYEDMESFKRSFDDVYALRPDQLQLGFLKVLKGSYMEQQKEAYGL 387

Query: 225 VL---PSENVAVDLYNLTQSITS 244
           V    P   V    +     +  
Sbjct: 388 VHKSSPCYEVLRTKWLSYGDVLR 410


>gi|206896314|ref|YP_002246510.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738931|gb|ACI18009.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM
           5265]
          Length = 348

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 20/198 (10%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-GGTPS 82
           +C   C YC     N HV RY++  +  +           Q+   + I ++    G  P 
Sbjct: 61  YCSSNCLYCGIRAQNKHVHRYRMTPQEIVD--------RAQIISAQGIKTVVLQSGEDP- 111

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
               + +  I+  I         + IT+     S +   +  ++  G +R  +  ++ +E
Sbjct: 112 FYTKETLGDIISAIQSL-----GLTITLSLGERSFDE--YSYWKALGADRYLMRHETADE 164

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +    L          A +   + +   +    +  LP Q       ++        D +
Sbjct: 165 ELYEKLHPGDKLENRKAHLLELKRLGYEVGAGSMVGLPGQDDFALAKDILFTYELDADMI 224

Query: 203 SLYQLTIEKGTLFYKMHK 220
            +        T      +
Sbjct: 225 GIGPFIPHPDTPLRDAPQ 242


>gi|195499798|ref|XP_002097099.1| GE24685 [Drosophila yakuba]
 gi|194183200|gb|EDW96811.1| GE24685 [Drosophila yakuba]
          Length = 583

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 4/117 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P        +  R       ++ L  QS   Q L  + R ++    +  +   R  
Sbjct: 352 TSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVEHIRQF 411

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
            P +    D I     +T  +++  +        +   L+  ++ + T  ++ +KD 
Sbjct: 412 LPNVGLSSDFICGFCGETEAEFQDTVSLIQQVKYNVAYLFAYSMREKTTAHRRYKDN 468


>gi|145590485|ref|YP_001152487.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282253|gb|ABP49835.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 350

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 15/180 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV KCP C F     R     E +++        + +      ++ +   GG    + P+
Sbjct: 53  CVAKCPICAFY----RLPGHGEGYVRKPGEVAAMVERFAKELGVTELHINGGFNPFLTPE 108

Query: 88  NIALILDGIAKNWTV-----SSNVEITIEANPSSVEV-NNFQGYRKAGVNRIS-LGVQSL 140
               +   + +          +  E+   A    V        +++AG++ IS  G +  
Sbjct: 109 YFDELFREVKRRVPRVAIKGPTMAEVDYYAKLWRVSRQEVLSRWKEAGLDAISGGGAEIF 168

Query: 141 EEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E+  + +   H  +  E +    LA  +    +  ++Y    +        + R     
Sbjct: 169 AEEVRKVVA-PHKISGEEWLEIAELAHKMGIPSNATMLYGHV-EREEHVVDHIFRVKDLQ 226


>gi|118465431|ref|YP_882802.1| hypothetical protein MAV_3625 [Mycobacterium avium 104]
 gi|118166718|gb|ABK67615.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 688

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYC------DFNSHVRRYKVGQENFIQSFL 56
           L  + +++     ++   +V     C   C +C           V R        ++S +
Sbjct: 131 LQQFPSSLPSARESAYAAWVSISVGCNNSCTFCIVPSLRG--KEVDRSPDDILAEVRSLV 188

Query: 57  TEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPS 115
            +      L G +++++       P+L   +   A +L    +   +          +P+
Sbjct: 189 ADGVLEVTLLG-QNVNAYGVSFADPALPRDRGAFARLLRACGEIDGLERVRF--TSPHPA 245

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P   +
Sbjct: 246 EFTDDVIEAMAQTPNVCPALHMPLQSGSDRVLRAMRRSYRAERYLGIIDRVRAAMPHAAI 305

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           + DLI   P +T   +   L             +Q +   GT 
Sbjct: 306 TTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTP 348


>gi|260911507|ref|ZP_05918095.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634371|gb|EEX52473.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 446

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 65/201 (32%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI----FFGGGTPSL 83
           C   C YC   +        +   I S + + Q      G   + +      F G     
Sbjct: 164 CDYFCTYC---TIPFARGFSRNPSISSLVQQAQDAANEGGKEIVLTGVNIGEFKGEG--- 217

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
              +    ++  + +   +      +IE  P+ +           +A +    + +QS  
Sbjct: 218 --NERFIDLVKALDQVEGIQRFRISSIE--PNLLTDELIDYCATSRAFMPHFHIPLQSGS 273

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R ++ +     + L +   P   +  D++     +    +E       S  +
Sbjct: 274 DEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVGSRGEEPAYFEDCYNFLKSLDI 333

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             L ++  +   GT   ++  
Sbjct: 334 SQLHVFPYSERPGTAALRIPY 354


>gi|91974544|ref|YP_567203.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisB5]
 gi|91681000|gb|ABE37302.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris BisB5]
          Length = 516

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 80/226 (35%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       +++          +   + + +L   + +  I F    P++   +
Sbjct: 202 CPHLCSYCGQRGFWTQWRHRDP------VLFAKELARLHREQGVKVINFADENPTV--SK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I            V   +  +  A+    + +    Y+KAG  R  LG++S +E++L  
Sbjct: 254 KIWRTFLEALIAEDVDLILVGSTRADDIVRDADILPLYKKAGWVRFLLGLESTDEKTLEL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + ++   +    AI L R          +    ++T       L++ LSY  D + L  +
Sbjct: 314 IRKDAATTTDREAIRLMRQHGILSMATWVVGFEEETDRDHWRGLRQLLSYDPDQIQLLYV 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           T  + T ++       ++          ++    + +   +  + +
Sbjct: 374 TPHRWTPYFNSVAGRRVI----QTDRRRWDYKHQVLATRNMPPWRV 415


>gi|71664178|ref|XP_819072.1| tRNA modification enzyme [Trypanosoma cruzi strain CL Brener]
 gi|70884358|gb|EAN97221.1| tRNA modification enzyme, putative [Trypanosoma cruzi]
          Length = 530

 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 83/235 (35%), Gaps = 18/235 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
            P    C+  C YC      +     +   I+S ++ ++ + +  G + I       G  
Sbjct: 196 IPISVGCLNHCTYC---KTKQARGDLRSWPIESIVSRVRSVLK-EGVKEIRITSEDVGAY 251

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAG--VNRISLGV 137
            +    +I  +L  I K    +  +     +NP  +   +++F    +       + + +
Sbjct: 252 GIDINTDIVSLLRAIVKEIQGTEVMMRVGMSNPPYLLRHLDDFAALLRHPNVYEFVHIPI 311

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R +   E    +H  R++ P ++   D+I A P +   +W   ++   
Sbjct: 312 QSGSNRILNAMQREYTLEEFYECVHRIRSVVPNVTLATDIICAFPGEGEAEWRETMELC- 370

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               DH+    L I +              +P++        LT+   S   L  
Sbjct: 371 ----DHVRFPVLNITRFYPRRNTPAASMKQIPTDVAKRRTSELTEFFNSYRTLDQ 421


>gi|119386903|ref|YP_917958.1| radical SAM domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119377498|gb|ABL72262.1| Radical SAM domain protein [Paracoccus denitrificans PD1222]
          Length = 620

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/224 (10%), Positives = 75/224 (33%), Gaps = 18/224 (8%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
              C +C  N     ++    +     +T +    + +    + +I       +L     
Sbjct: 270 KHHCTFCGLNGDTMAFRSKSPDRAFDEITWLAQRHKASRVGCVDNILDMKYVTTLFP--- 326

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
              + +          ++   +++N   + ++  +  R  GV +I  G++S  ++ L+ +
Sbjct: 327 --RLAEAGYHL-----DLFYEVKSN---LRLDQLRQMRAGGVTQIQPGIESFSDRVLKLM 376

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ---WEMELQRALSYAVDHLSLY 205
            +     + I  +   R +   ++++++   P +   +       + +         S  
Sbjct: 377 DKGCTGFQNIQLMRWCRELGIEVAWNVLSGFPGEEPEEYAAMARLIPQLTHLDPP-CSCG 435

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDL-YNLTQSITSAHGL 248
            L +++ + F+   +   +       A    Y L +   S    
Sbjct: 436 MLRLDRFSPFHSRAEALGIRRMRPARAYFYVYPLGRRELSRLAY 479


>gi|312114980|ref|YP_004012576.1| MiaB-like tRNA modifying enzyme [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220109|gb|ADP71477.1| MiaB-like tRNA modifying enzyme [Rhodomicrobium vannielii ATCC
           17100]
          Length = 417

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFGGGTPSL 83
           C  +C +C            +       + +++ + +      + +      +G   P  
Sbjct: 143 CDHRCTFC---VIPFGRGPSRSVPAGEVVHQIRALVEDGYREVVLTGVDLTSYGADLPGE 199

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++   +  ++  + +       + I+   +    +      + +    +  + L +QS +
Sbjct: 200 MK---LGRLVRTVLRLVPELPRLRIS-SIDTMEADDALIDAFAEEERLMPHLHLSLQSGD 255

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H   + I      R I P      DLI   P +    +E  ++ A    +
Sbjct: 256 NLILKRMKRRHAREDVIRFCREMREIRPDMVFGADLIAGFPTEDEAMFENTIRLADECGL 315

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
             + ++  +    T   +M +
Sbjct: 316 SFMHVFPYSPRPKTAAARMPQ 336


>gi|282850159|ref|ZP_06259538.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella parvula ATCC
           17745]
 gi|282579652|gb|EFB85056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Veillonella parvula ATCC
           17745]
          Length = 437

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++      +   + +  L    +   + F  GT 
Sbjct: 154 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTDLGVKGFKEITLLGQNVNSYGLDFKDGT- 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 212 ------DFGTLVDALDGIPGIERIRY--MTSHPQDMSKSMIDALGRSSNIVTHLHLPIQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++        +   R     +    D+I   P +T   ++  LQ     
Sbjct: 264 GSNRILKKMNRHYTVEHYKELLSYCREKIKDVVVTTDIIVGFPGETEEDFQATLQLLKDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 324 RYDMAYTFIYSKRSGTPAATM 344


>gi|282892480|ref|ZP_06300814.1| hypothetical protein pah_c260o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497762|gb|EFB40126.1| hypothetical protein pah_c260o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 437

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 71/223 (31%), Gaps = 19/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C K C YC                 +  + E + +    G R I+ +      +G   P 
Sbjct: 156 CSKYCTYC---VVPYTRGEEVSRPPEHIVEECRHLVSQ-GYREITLLGQNVNSYGKDAPE 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    +L+ +     +       + ++P  +        R        +   +Q+ 
Sbjct: 212 W--GCLFHDLLEKLDAIPGLERIRF--MTSHPVDISRELMLAIRDLKSLCEFVHFPIQAG 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +   E +  + + R + P ++   D+I   P +T  +++   +      
Sbjct: 268 SNRILKKMHRMYTVEEYLEKVAMLRELVPHVALGTDIIVGFPTETDEEFQETYRILKETE 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                ++  +  KGT    M    D+    ++  +      Q 
Sbjct: 328 YAVAFIFAYSARKGTP--AMRWKDDIPEEVKDQRLKALMQLQE 368


>gi|227498874|ref|ZP_03929014.1| radical SAM family protein [Acidaminococcus sp. D21]
 gi|226904326|gb|EEH90244.1| radical SAM family protein [Acidaminococcus sp. D21]
          Length = 299

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 76/240 (31%), Gaps = 18/240 (7%)

Query: 28  CVK-KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   +C +C          V    +    +     M        +  IF   G   ++  
Sbjct: 28  CAHNRCTFCAMYK-----DVPFSVYTDEAVDRQIAMAAHYAGDEVRRIFLADGDAFVLPT 82

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  +L       T  +   +T  A P  +           R+AG+  +  G+++ + Q
Sbjct: 83  EKLLALLA--RLYGTFPNLQRVTSYAGPKDILRKSDEELLRLREAGLKMLYFGLETGDSQ 140

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDH 201
            L+ + +   A E+IAA         ++S  +I  L                      D 
Sbjct: 141 LLQQIQKGVTAEESIAAGQKVVRSGMKLSMMVIAGLGGAAGSARHALKTAYAVSQIQPDM 200

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSIT---SAHGLHAYEISNH 256
           LS+  L + KGT   +  ++G   L  P          L+             +  ISN+
Sbjct: 201 LSVLTLRLYKGTQMLREFEEGKFELLSPCGLAEEVRTFLSHIELPPNRHCLFRSNHISNY 260


>gi|198450948|ref|XP_001358190.2| GA19527 [Drosophila pseudoobscura pseudoobscura]
 gi|198131266|gb|EAL27327.2| GA19527 [Drosophila pseudoobscura pseudoobscura]
          Length = 589

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 4/114 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P        +  R       ++ L  QS   + L  + R +     +  +   R I
Sbjct: 355 TSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTEVLARMRRGYTREAYLELVEHIREI 414

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            P +    D I     +T  ++E  +    +   +   L+  ++ + T  ++ +
Sbjct: 415 LPTVGLSSDFICGFCGETEAEFEDTISLINTVQYNVAYLFAYSMREKTTAHRRY 468


>gi|308272742|emb|CBX29346.1| hypothetical protein N47_J03270 [uncultured Desulfobacterium sp.]
          Length = 396

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 96/293 (32%), Gaps = 48/293 (16%)

Query: 7   YENNMTGQGSNSLGVYVHW----PFCVKKCPYCDFNS----------HVRRYKVGQENFI 52
           +E       S +  + +      P+   +C +C              HV +       ++
Sbjct: 22  FEQGPIRPPSEAHSLLIRITRNCPW--NRCSFCPVYKESRFSIRPVEHVIKDIDTVHKYV 79

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFG-----------------GGTPSLI---------EP 86
           +  L  +    +  G + IS+                      G  S+          +P
Sbjct: 80  KHLL-HLADEARKKGKQEISTADIKVETNESRAFNAAYYWLAAGMKSIFLQDANSLIIKP 138

Query: 87  QNIALILDGIAKNWTVSSNV-EITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            ++  IL  + + +  +  +         + +  ++    R AG++RI +G++S  ++ L
Sbjct: 139 PDLIKILVHLKECFPWTERITSYARSHTVARISDDDLLAIRTAGLSRIHIGLESGSDKVL 198

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           + + +  +    I A   A+     +S  ++  +     +                D + 
Sbjct: 199 QMVKKGVSKETHIKAGQKAKKAGFELSEYVMPGIGGISLSREHALETADALNQINPDVIR 258

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           L  LTI + T  Y  +K G     ++ +      L       + + +Y  S+H
Sbjct: 259 LRSLTIPENTGLYDEYKAGRFEKGNDLITAKEILLFIENL--NNITSYIKSDH 309


>gi|300727098|ref|ZP_07060517.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299775642|gb|EFI72233.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 459

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 68/191 (35%), Gaps = 12/191 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   +        +   I S + + +   +  G   + + +  G    +    
Sbjct: 176 CNYFCTYC---TIPYARGFSRNPSIVSLVKQAEEAAEEGGKEIVLTGVNIGDFGET--TN 230

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
           ++   ++  + +   +      ++E  P   +    +     +A +    + +QS  ++ 
Sbjct: 231 ESFLDLVKALDQVQGIQRFRISSLE--PDLCDDELIEYCSTSRAFMPHFHIPLQSGSDEV 288

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R ++++     I L +   P   +  D++     +    +E   +   S  V  L
Sbjct: 289 LKLMHRRYDSALFAHKIKLIKKFMPDAFIGVDVMVGCRGEKPEYFEECYRFLESLPVTQL 348

Query: 203 SLYQLTIEKGT 213
            ++  +   GT
Sbjct: 349 HVFPYSERPGT 359


>gi|298504557|gb|ADI83280.1| dehypoxanthinylfutalosine cyclase, putative [Geobacter
           sulfurreducens KN400]
          Length = 354

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 57/189 (30%), Gaps = 14/189 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C F     R +   + ++ +       + +L        +  GG  P  +   
Sbjct: 63  CESKCKFCAFY----RDEAAPDAYLLAEEAIFAKIAELVEHGGTQLLMQGGLHP-QLGID 117

Query: 88  NIALILDGIA------KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSL 140
               +  GI       +N ++S      I            +  R+AG++ I   G + L
Sbjct: 118 WFEDLFRGIKARFPQVQNHSLSPAEITQIATVSKLTIPETVRRLREAGLDSIPGGGAEIL 177

Query: 141 EEQSLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +   + +  R        A +  A       +  +++   ++T       L R      
Sbjct: 178 VDSVRQEISPRKIGWEGWAAVMSEAARQGMATTATMMFG-SRETPEDIVEHLFRVRELQA 236

Query: 200 DHLSLYQLT 208
              S     
Sbjct: 237 AGGSFTAFI 245


>gi|51245779|ref|YP_065663.1| hypothetical protein DP1927 [Desulfotalea psychrophila LSv54]
 gi|81641932|sp|Q6ALW9|MIAB_DESPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|50876816|emb|CAG36656.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 447

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 21/199 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQEN---------FIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C YC    + R  +V +            ++S + E+  + Q     + ++     
Sbjct: 161 CNNFCTYCV-VPYTRGREVSRSIKDIVEEITVLVKSGIKEITLLGQNVNSYAQTNTVTED 219

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLG 136
            TP+         +L  +A    +      T  +NP  +  +  Q ++   V   +  L 
Sbjct: 220 DTPATFSD-----LLRQVAAVEGLKRLRFTT--SNPKDLSNDLMQCFKDLDVLCPQFHLP 272

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQ+   + L+ +GR +     +  +   R   P ++   D+I   P +T  ++E  ++  
Sbjct: 273 VQAGSNKVLKEMGRKYTVESYLDLVTQLRENCPEIAITTDIIVGFPGETDEEFEETMKML 332

Query: 195 LSYAVDHLSLYQLTIEKGT 213
            +        ++ +   GT
Sbjct: 333 ETVRYHGSFSFKYSDRPGT 351


>gi|315651497|ref|ZP_07904518.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
 gi|315486232|gb|EFU76593.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
          Length = 440

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 83/252 (32%), Gaps = 25/252 (9%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           C K C YC       ++ S+     + Q   + +    ++ +  +    ++  +   G  
Sbjct: 154 CNKNCTYCIIPSLRGNYRSYPLDDLIAQAKDLAT--QGIKELILVAQETTLYGVDIYG-- 209

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                 + +  +L  +AK   +       +   P  +                 + + +Q
Sbjct: 210 -----KKTLPKLLKELAKIEGIEWIR--ILYCYPEEITDELIDVIASEDKVCKYLDIPIQ 262

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALS 196
              +  LR + R     + +  I   RN  P ++    +I   P +T+   +  ++    
Sbjct: 263 HASDNILRRMARRTTYDDLVNIIGRLRNNIPDITLRTTIIAGFPGETVEDVDTVIEFIKQ 322

Query: 197 YAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              + L ++  + E+GT+   F     + +     + +      +++          + +
Sbjct: 323 MKFERLGVFTYSEEEGTVAAGFDNQIDEKEKEARRDRIMRVQQEISEKNLERKVGKTFRV 382

Query: 254 SNHSFLGAESLH 265
                L  E+++
Sbjct: 383 LIEGKLPDENVY 394


>gi|303327235|ref|ZP_07357677.1| RNA modification enzyme, MiaB-family [Desulfovibrio sp. 3_1_syn3]
 gi|302863223|gb|EFL86155.1| RNA modification enzyme, MiaB-family [Desulfovibrio sp. 3_1_syn3]
          Length = 493

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 63/197 (31%), Gaps = 16/197 (8%)

Query: 28  CVKKCPYCDFNSHV-----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C  +C YC     V     R      +  +      ++          ++   +G   P 
Sbjct: 181 CAHRCTYC----IVPLTRGRPRSRAPQEVLDEARRLLRAGHAELMLSGVNLRQYGRDVPD 236

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYR--KAGVNRISLGVQS 139
                ++   LDG       +    + I +  PS ++    +     +     + + +Q 
Sbjct: 237 YGGFWDLLRFLDG-HLAPEFAGRARLRISSLEPSQLDRRGLETLTACRMLCPHLHISLQH 295

Query: 140 LEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
                L+ +GR H  A      +      +PRM    D++   P +T     + L+    
Sbjct: 296 ASPAVLKRMGRGHYTAGMLEEGVAALAAHWPRMGLGADILVGFPGETDEDLRLLLELVQR 355

Query: 197 YAVDHLSLYQLTIEKGT 213
             + +  ++  +   GT
Sbjct: 356 LPLSYAHVFPYSRRPGT 372


>gi|254810662|sp|A8ZUS9|BIOB_DESOH RecName: Full=Biotin synthase
          Length = 329

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 17/188 (9%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C F S   R K   + +    ++E+         + T     S +  G G    +    +
Sbjct: 72  CAFCSQSVRAKADIDAY--PLISEIDLAEPGRRLESTPVNRYSVVTSGRG----LSSAEV 125

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           + +   +A          ++  A+   ++       R AGV R    ++S  E     + 
Sbjct: 126 STVSRALAAI----DTTAVSTCASLGILDPGQLAMLRDAGVTRYHHNLESA-ESLFANVC 180

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
             H   E +  +  A+     +    I+ L  +T  Q            VD + +  L  
Sbjct: 181 TTHTYEERVQTVKAAKAAGLSVCCGGIFGL-GETDDQVAELAFALRDLDVDSVPVNFLVP 239

Query: 210 EKGTLFYK 217
            KGT   K
Sbjct: 240 IKGTAMEK 247


>gi|281419891|ref|ZP_06250890.1| RNA modification enzyme, MiaB family [Prevotella copri DSM 18205]
 gi|281406018|gb|EFB36698.1| RNA modification enzyme, MiaB family [Prevotella copri DSM 18205]
          Length = 433

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 12/221 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C + C YC       ++    +  I       + + +      I    + + G    +  
Sbjct: 146 CNRHCAYCAIPIITGKHVSRPKEEI--LQEVRELVAEGVKEFQIIAQELTYYGVD--IDG 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             +I  ++  +A    V         A P+   ++     R+       + + +Q + + 
Sbjct: 202 KHHITELISEMADIPGVKWIRLHY--AYPNQFPMDLLDVMREKPNVCKYLDIALQHISDH 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R+    E I  +   R   P +     L+   P +T   +   L        + 
Sbjct: 260 MLTSMHRHVTKQETINLLKAIRERVPGIHIRTTLMVGFPGETDEDFHELLDFVREQRFER 319

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           +  +  + E+GT     ++D       +    +L  L Q I
Sbjct: 320 MGAFAYSEEEGTYSATHYEDNVPAEVKQRRLDELMILQQDI 360


>gi|195571987|ref|XP_002103982.1| GD20720 [Drosophila simulans]
 gi|194199909|gb|EDX13485.1| GD20720 [Drosophila simulans]
          Length = 583

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 4/144 (2%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P        +  R       ++ L  QS   Q L  + R ++    +  +   R  
Sbjct: 352 TSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQF 411

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +    D I     +T  +++  +        +   L+  ++ + T  ++  KD   +
Sbjct: 412 LPDVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRFKDDVPI 471

Query: 226 LPSENVAVDLYNLTQSITSAHGLH 249
                    +  + +   +     
Sbjct: 472 NVKNERLRRMVQIFREGATQLHRK 495


>gi|158520699|ref|YP_001528569.1| biotin synthase [Desulfococcus oleovorans Hxd3]
 gi|158509525|gb|ABW66492.1| biotin synthase [Desulfococcus oleovorans Hxd3]
          Length = 334

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 17/188 (9%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWM-----RQLTGPRSISSIFFGGGTPSLIEPQNI 89
           C F S   R K   + +    ++E+         + T     S +  G G    +    +
Sbjct: 77  CAFCSQSVRAKADIDAY--PLISEIDLAEPGRRLESTPVNRYSVVTSGRG----LSSAEV 130

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
           + +   +A          ++  A+   ++       R AGV R    ++S  E     + 
Sbjct: 131 STVSRALAAI----DTTAVSTCASLGILDPGQLAMLRDAGVTRYHHNLESA-ESLFANVC 185

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
             H   E +  +  A+     +    I+ L  +T  Q            VD + +  L  
Sbjct: 186 TTHTYEERVQTVKAAKAAGLSVCCGGIFGL-GETDDQVAELAFALRDLDVDSVPVNFLVP 244

Query: 210 EKGTLFYK 217
            KGT   K
Sbjct: 245 IKGTAMEK 252


>gi|49483824|ref|YP_041048.1| hypothetical protein SAR1653 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425701|ref|ZP_05602125.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428362|ref|ZP_05604760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430999|ref|ZP_05607379.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433687|ref|ZP_05610045.1| RNA modification protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436601|ref|ZP_05612645.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
 gi|282904158|ref|ZP_06312046.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
 gi|282905985|ref|ZP_06313840.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282911214|ref|ZP_06319016.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282914383|ref|ZP_06322169.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
 gi|282919352|ref|ZP_06327087.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C427]
 gi|282924677|ref|ZP_06332345.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C101]
 gi|293503457|ref|ZP_06667304.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510474|ref|ZP_06669180.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus M809]
 gi|293531014|ref|ZP_06671696.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428154|ref|ZP_06820786.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590880|ref|ZP_06949518.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MN8]
 gi|49241953|emb|CAG40648.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271395|gb|EEV03541.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275203|gb|EEV06690.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278429|gb|EEV09065.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281780|gb|EEV11917.1| RNA modification protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283952|gb|EEV14075.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
 gi|282313512|gb|EFB43907.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317162|gb|EFB47536.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C427]
 gi|282321564|gb|EFB51889.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
 gi|282324909|gb|EFB55219.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282331277|gb|EFB60791.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595776|gb|EFC00740.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
 gi|290920282|gb|EFD97348.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095123|gb|EFE25388.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466838|gb|EFF09358.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus M809]
 gi|295128512|gb|EFG58146.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297575766|gb|EFH94482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MN8]
 gi|312437955|gb|ADQ77026.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315195479|gb|EFU25866.1| hypothetical protein CGSSa00_07410 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 448

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEEEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|309811287|ref|ZP_07705076.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dermacoccus sp. Ellin185]
 gi|308434769|gb|EFP58612.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dermacoccus sp. Ellin185]
          Length = 512

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 86/249 (34%), Gaps = 21/249 (8%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 136 LESLEVFPSTLPTRRDSAYSGWVSISVGCNNTCTFC----IVPALRGKEKD--RRPGEIL 189

Query: 60  QWMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L     +     G    +      +    + +L    +   +          +P+
Sbjct: 190 AEVKALVAQGVVEITLLGQNVNTYGVEFGDRHAFSKLLRACGEIEGLERVRF--TSPHPA 247

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    +  + + +QS  ++ L+ + R++ + + +  I   R   P   +
Sbjct: 248 AFTDDVIDAMAETPNVMPSLHMPLQSGSDKVLKDMRRSYRSKKFLGIIEKVREKMPDAAI 307

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + D+I   P +T   ++  L    +        +Q +I  GT    M    D  +P E V
Sbjct: 308 TTDIIVGFPGETEEDFQGTLDVVEASRFSSAFTFQYSIRPGTPAATM----DDQIPKEVV 363

Query: 232 AVDLYNLTQ 240
                 L +
Sbjct: 364 QERFERLIE 372


>gi|311086171|gb|ADP66253.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Buchnera
           aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311087332|gb|ADP67412.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
          Length = 427

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 14/205 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K   YC F                  L E+  + +  G + I+ +         P+  
Sbjct: 144 CNK---YCSFCVVPYTRGNEISRPCDDVLFEISLLAKQ-GIKEINLLGQNVNAYQGPTF- 198

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               +    + I     +     I     NP     +  + Y+     V+ + L VQS  
Sbjct: 199 -NGKVCYFSELIRLVAEIDGIERIRFTTSNPLEFTDDIIEVYKDTPKLVSFLHLPVQSGS 257

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R++   +  + I       P +  S D I   P ++   +E  ++   +   
Sbjct: 258 NKILNLMKRSYTTEDYTSIIKKLTIARPDIQISSDFIVGFPGESEIDFEKTIEFIKNINF 317

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDL 224
           D    +  +   GT    M+ + DL
Sbjct: 318 DMSFSFIYSARPGTPASNMNDNLDL 342


>gi|157363921|ref|YP_001470688.1| MiaB-like tRNA modifying enzyme [Thermotoga lettingae TMO]
 gi|157314525|gb|ABV33624.1| MiaB-like tRNA modifying enzyme [Thermotoga lettingae TMO]
          Length = 433

 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----FGGGTPSL 83
           C + C YC       R K  +   ++  + EM  +        + +      +G    + 
Sbjct: 150 CNEFCSYC--IVPKTRGKQIRSKPVEVVIKEMNDLLNNGYKEIVLTGVNLGKYGRDIGTS 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN--FQGYRKAGVNRISLGVQSLE 141
           +    +  +L+ I  +  +          N   +                 + + +QS  
Sbjct: 208 LSM-LLRTLLNQIHDDSRIR-----LSSINVQDLSDELISLFALSNKLCPHLHIPLQSGS 261

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   EA+      ++I    SF  D+I   P +T+  +    +       
Sbjct: 262 NRILQKMNRKYTVEEALDIFEKLKSINQYFSFTTDVIVGFPGETIGDFLQTQELIKEIGF 321

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             + +++ +   GT+  K+
Sbjct: 322 VKVHIFKYSSRPGTVASKL 340


>gi|168218220|ref|ZP_02643845.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
 gi|182379767|gb|EDT77246.1| radical SAM domain protein [Clostridium perfringens NCTC 8239]
          Length = 347

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR       +  S    + + ++  G    + +  GG      +  
Sbjct: 60  CKRNCMYCG----LRRDNKNLNRYRLSHEEIIDFAKKAVGYGYKTLVLQGGED----DYY 111

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  +     +   + ++I   P       ++  +KAG +R  L +++ + +    
Sbjct: 112 TVERLVPIVKDLKALGVALTLSIGERP----FEEYEALKKAGADRFLLRIETTDRELYEE 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L    +    I  +   R +   +    +  LP Q +     ++       VD   +   
Sbjct: 168 LDPGMSHENRIQCLKNLRKLGYEVGSGCLVGLPGQKIESLADDILFFKELDVDMNGIGPF 227

Query: 208 TIEKGTLF 215
              + T  
Sbjct: 228 IPNEDTPL 235


>gi|18311442|ref|NP_563376.1| biotin synthase [Clostridium perfringens str. 13]
 gi|110798649|ref|YP_697148.1| biotin synthase [Clostridium perfringens ATCC 13124]
 gi|168206855|ref|ZP_02632860.1| radical SAM domain protein [Clostridium perfringens E str. JGS1987]
 gi|168211218|ref|ZP_02636843.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
 gi|168215152|ref|ZP_02640777.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|169343174|ref|ZP_02864195.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|182625998|ref|ZP_02953761.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
 gi|18146126|dbj|BAB82166.1| probable biotin synthetase [Clostridium perfringens str. 13]
 gi|110673296|gb|ABG82283.1| radical SAM domain protein [Clostridium perfringens ATCC 13124]
 gi|169298726|gb|EDS80802.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|170661737|gb|EDT14420.1| radical SAM domain protein [Clostridium perfringens E str. JGS1987]
 gi|170710755|gb|EDT22937.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170713444|gb|EDT25626.1| radical SAM domain protein [Clostridium perfringens CPE str. F4969]
 gi|177908705|gb|EDT71216.1| radical SAM domain protein [Clostridium perfringens D str. JGS1721]
          Length = 347

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR       +  S    + + ++  G    + +  GG      +  
Sbjct: 60  CKRNCMYCG----LRRDNKNLNRYRLSHEEIIDFAKKAVGYGYKTLVLQGGED----DYY 111

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  +     +   + ++I   P       ++  +KAG +R  L +++ + +    
Sbjct: 112 TVERLVPIVKDLKALGVALTLSIGERP----FEEYEALKKAGADRFLLRIETTDRELYEE 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L    +    I  +   R +   +    +  LP Q +     ++       VD   +   
Sbjct: 168 LDPGMSHENRIQCLKNLRKLGYEVGSGCLVGLPGQKIESLADDILFFKELDVDMNGIGPF 227

Query: 208 TIEKGTLF 215
              + T  
Sbjct: 228 IPNEDTPL 235


>gi|119357557|ref|YP_912201.1| MiaB-like tRNA modifying enzyme YliG [Chlorobium phaeobacteroides
           DSM 266]
 gi|238065324|sp|A1BHA0|RIMO_CHLPD RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|119354906|gb|ABL65777.1| SSU ribosomal protein S12P methylthiotransferase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 432

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 66/207 (31%), Gaps = 19/207 (9%)

Query: 24  HWPF------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           H  +      C + C +C            +  +    + ++     L   + +  +   
Sbjct: 134 HISYLKIAEGCNRSCSFCSIPKI-------RGRYRSQPMEQLLREAALLQKKGVRELNLI 186

Query: 78  GGTPSLIEPQNI--ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRI 133
               S+         ++ + + +   +       + A P    +        RK   N +
Sbjct: 187 AQDTSIYGRDLYGTPMLRELLVRLSDMEFRWIRLLYAYPLDFPLEVITAMSERKNICNYL 246

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L +Q   ++ LR + R    +E +  +   R   P +     ++   P +T  +++  +
Sbjct: 247 DLPLQHCNDRILRSMNRGITKTETVRLLDTIRAANPDIRLRTTMLVGFPGETRAEFDELM 306

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           Q   +   D L  +    E+    Y +
Sbjct: 307 QFIETMRFDRLGCFPYCHEEHAPSYAL 333


>gi|313890870|ref|ZP_07824494.1| radical SAM protein, TIGR01212 family [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120768|gb|EFR43883.1| radical SAM protein, TIGR01212 family [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 306

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 66/200 (33%), Gaps = 11/200 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M +     S   ++F   T +    + I  
Sbjct: 43  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVSHYLVYFQNFTNTHASLEVIKE 102

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +       V   + I I   P  +            +     + LG+Q+  E++ R +
Sbjct: 103 RYEQAIFEPGV---IGINIGTRPDCLPDEVIAYLAELAEKMHVTVELGLQTTYEETSRLI 159

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+       +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 160 NRAHSYELYQETVKRLRKYPKIEVVAHLINGLPGETHQMMIENVRRCVTDNDIQGIKLHL 219

Query: 207 LTIEKGTLFYKMHKDGDLVL 226
           L +   T   + + +G L L
Sbjct: 220 LHLMTNTRMQRDYHEGRLQL 239


>gi|53712894|ref|YP_098886.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis YCH46]
 gi|81382940|sp|Q64VX4|BIOB_BACFR RecName: Full=Biotin synthase
 gi|52215759|dbj|BAD48352.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides fragilis YCH46]
          Length = 748

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 13/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIE 85
           C + C +C  +SH   YK   + + + S    ++  +       +  S+   G  PS   
Sbjct: 62  CPENCKWCAQSSH---YKTKADVYDLVSAEECLRQAKYNEAQGVNRFSLVTSGRKPS--- 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+N+  +   + +    SS   I + A+   ++    Q    AGV R    +++      
Sbjct: 116 PKNMKELCVAVRRMRRHSS---IRLCASLGLLDEEELQALYDAGVTRYHCNLET-APSHF 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +  ++ AR +   +    I  +  +T+ Q            +  + + 
Sbjct: 172 DSLCTTHTQEQKLKTLYAARRVGMDLCCGGIIGM-GETVEQRIEFAFTLRDLNIQSIPIN 230

Query: 206 QLTIEKGTLFYKM 218
            L    GT     
Sbjct: 231 LLQPIPGTPLEHQ 243


>gi|77411496|ref|ZP_00787840.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           CJB111]
 gi|77162422|gb|EAO73389.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           CJB111]
          Length = 311

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HAKLEI 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       + I I   P  +         +        + LG+Q+  E +   +
Sbjct: 100 IKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEVTSALI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R + P++     LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKKTVKRIRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +   T   + + +G L L S+    D  ++          H   I  H   G    H
Sbjct: 220 LLHLMTNTRMQRDYHEGRLRLLSQE---DYISIICDQLEIIPKH---IVIHRITGDAPRH 273

Query: 266 NL 267
            L
Sbjct: 274 ML 275


>gi|194902322|ref|XP_001980672.1| GG17285 [Drosophila erecta]
 gi|190652375|gb|EDV49630.1| GG17285 [Drosophila erecta]
          Length = 586

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 30/220 (13%)

Query: 28  CVKKCPYC--DF----------NSHVRRYKVGQENFIQS---FLTEMQWMRQLTGPRSIS 72
           C   C YC   F          +S V   K   E  ++        +   R  +      
Sbjct: 251 CDNMCTYCIVPFTRGRERSRPLHSIVAEAKALAEQGVKEVTLLGQNVNSYRDRSAQEQQE 310

Query: 73  SIFFGGGTP-----SLIEPQN----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ 123
           ++     TP     ++ +P+      A +L  +A+              +P        +
Sbjct: 311 ALCPEEATPVPGFSTVYKPKTGGTPFAALLRAVAQAVPEMRVRF--TSPHPKDFSDEVLE 368

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYAL 179
             R       ++ L  QS   Q L  + R ++    +  +   R   P +    D I   
Sbjct: 369 VIRDHPNVCKQLHLPAQSGNTQVLDRMRRGYSREAYLELVQHIRQFLPNVGLSSDFICGF 428

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
             +T  +++  +        +   L+  ++ + T  ++ +
Sbjct: 429 CGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRY 468


>gi|148240091|ref|YP_001225478.1| 2-methylthioadenine synthetase [Synechococcus sp. WH 7803]
 gi|229891030|sp|A5GML6|MIAB_SYNPW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|147848630|emb|CAK24181.1| 2-methylthioadenine synthetase [Synechococcus sp. WH 7803]
          Length = 454

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 65/235 (27%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC            Q     +   EM+ +    G + I+ +      +G   P 
Sbjct: 159 CNERCTYC---VVPSVRGKEQSRLPDAIKLEMEGLAAQ-GFKEITLLGQNIDAYGRDLPG 214

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +    + D +     V     I     +P                      +  Q
Sbjct: 215 ITPEGRRQHTLTDLLHHVHDVEGLERIRFATSHPRYFTDRLIDACADLPKLCEHFHIPFQ 274

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   LR + R +        I   R   P   +S D+I A P +T  Q+   L     
Sbjct: 275 SGDNDVLRAMARGYTVERYRRIIDRIRERMPDASLSADVIVAFPGETDAQYRRTLALIEE 334

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D ++    +    T       D  L    +   +   N      +      Y
Sbjct: 335 IGFDQVNTAAYSPRPNTPAAD--WDNQLPEDIKVERLREINALVERCARERNGRY 387


>gi|189425188|ref|YP_001952365.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
           lovleyi SZ]
 gi|229890544|sp|B3E424|MIAB_GEOLS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|189421447|gb|ACD95845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter lovleyi SZ]
          Length = 438

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 66/192 (34%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     +  Y  G+E   + F   +Q ++ L        +  G    S  ++ 
Sbjct: 158 CDNFCSYC-----IVPYVRGREIS-RRFAEILQEVQDLAAQGLREVVLLGQNVNSYGLKG 211

Query: 87  QNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           +      + +     VS    +  + ++P  +  +    +         + L  Q+   +
Sbjct: 212 EEQPSFAELVRAVAAVSGIDRVRFVTSHPKDMSDDLIACFADLAKLCGSLHLPAQAGNNR 271

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++    +  I+  R   P +    D+I   P +T  ++E  L          
Sbjct: 272 ILKAMNRGYSREHYLETIYKLRQARPEIKITGDMIVGFPGETEAEFEETLSLMEEVRYFD 331

Query: 202 LSLYQLTIEKGT 213
           L  +  +   GT
Sbjct: 332 LFSFVYSPRPGT 343


>gi|20090019|ref|NP_616094.1| 2-methylthioadenine synthase [Methanosarcina acetivorans C2A]
 gi|19914987|gb|AAM04574.1| 2-methylthioadenine synthase [Methanosarcina acetivorans C2A]
          Length = 435

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 69/214 (32%), Gaps = 28/214 (13%)

Query: 23  VHW----PFCVKKCPYCDFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSI---SSI 74
           +H       C   C YC     V+  +    +F  +  + +++      G R I   S  
Sbjct: 147 IHICQISQGCNFACSYC----IVKHARGKLRSFPPEKIVKDIRS-AVADGCREIWLTSQD 201

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANP------SSVEVNNFQGYRKA 128
               G  + ++   +  ++  I  ++ V   +       P       + + +        
Sbjct: 202 DSQYGMDTGVKLPELLRMISEIPGDFKVRVGMMNPFSVLPILDGLVDAFDSDKVFKL--- 258

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               + L +QS     L+ + R H        I   R  F  +S   D+I     +T   
Sbjct: 259 ----LHLPIQSASHSVLKKMNRLHKMDAVDEIITKFRARFEDLSLFTDIIVGFCDETDED 314

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +E  ++    Y  + +++ + +    T  +    
Sbjct: 315 FEETIEWVKKYRPEKINISRYSPRPHTKAFSFRN 348


>gi|218261905|ref|ZP_03476578.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223699|gb|EEC96349.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
           DSM 18315]
          Length = 431

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 10/215 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       RY+      I+  +  +  ++Q      + +         L +  
Sbjct: 146 CDRTCSYCAIPISTGRYQSIPMEEIEKEVRLL--VKQGVKEFQVIAQDLTYYGLDLYKRH 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I+    V           PS    +  +  R+       + + +Q + +  L
Sbjct: 204 ALPELVERISDIPGVEWIRLHY--GYPSHFPYDLLRVMRERDNVCKYMDIALQHISDPML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + RN    E  A I   R   P +     L+   P +T   +E  ++       + + 
Sbjct: 262 KKMRRNITKEETYALIRRMREEVPGIHLRTTLMVGHPGETEQDFEELVEFVKEARFERMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +  + E+GT  +K +   D + P        Y +
Sbjct: 322 AFAYSHEEGTYSFKHYT--DDIDPDVKQDRLDYLM 354


>gi|193213382|ref|YP_001999335.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327]
 gi|193086859|gb|ACF12135.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327]
          Length = 456

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 47/130 (36%), Gaps = 4/130 (3%)

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRN 151
           D +     +  +        P  ++    +    +   +    L +QS  ++ L+ +GR 
Sbjct: 223 DLLRHLEELDVSRIRISSIEPQFLDDELIELVAGSTKIMPHFHLPLQSGSDKVLKAMGRQ 282

Query: 152 HNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI 209
           ++ +     +  A +      +  D++   P ++   +E   +      V +L ++  ++
Sbjct: 283 YDTALYRERLLRAVSSIRGCAIGADVMVGYPGESEQDFETMYRFIEELPVAYLHVFSCSV 342

Query: 210 EKGTLFYKMH 219
             GT   +  
Sbjct: 343 RPGTRLSREI 352


>gi|193212430|ref|YP_001998383.1| MiaB-like tRNA modifying enzyme YliG [Chlorobaculum parvum NCIB
           8327]
 gi|238065322|sp|B3QMN0|RIMO_CHLP8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|193085907|gb|ACF11183.1| MiaB-like tRNA modifying enzyme YliG [Chlorobaculum parvum NCIB
           8327]
          Length = 437

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 62/197 (31%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C +C            +  ++   + ++     L   + +  +       S+    
Sbjct: 149 CNRRCSFCSIPKI-------RGPYVSQPIEQLLREAALLQEQGVRELNLIAQDISVYGYD 201

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + D   +   +  +    + A P +  +      R+     N + + +Q + ++
Sbjct: 202 LYGKPALNDLTLRLSDMGFDWIRLLYAYPLNFPLEVIDTMRQRRNVCNYLDMPLQHINDR 261

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R          I   R   P +     +I   P +T  +++  L        D 
Sbjct: 262 ILKSMQRGIGRKGTEELIDAIRQKNPDIRLRTTMIAGYPSETREEFDELLDFVRQARFDR 321

Query: 202 LSLYQLTIEKGTLFYKM 218
           L  +    E+    Y +
Sbjct: 322 LGCFPYRHEEHAPAYAL 338


>gi|254252796|ref|ZP_04946114.1| Fe-S oxidoreductase [Burkholderia dolosa AUO158]
 gi|124895405|gb|EAY69285.1| Fe-S oxidoreductase [Burkholderia dolosa AUO158]
          Length = 480

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 27/266 (10%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++    + +++ L E++W+R          
Sbjct: 199 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHRYRVRS-VENVLAEVKWIRDNMPEVKEIM 257

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T      + IA  L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 258 FDDDTFTDDAPRAEAIARGLGKLGVTWSCNAKANVPYKT---------LKVMKENGLRLL 308

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 309 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETKETIKKTIEY 368

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
           A       + +       GT  YK   +   +  ++ + +      Q   +A G      
Sbjct: 369 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQ--LAAIGYPHLSR 426

Query: 252 -EISNHSFLGAESLHNLNYWRYGDYI 276
            EI +H     E  +   Y+R     
Sbjct: 427 DEIYHHL----EQFYREFYFRPSKIW 448


>gi|15668967|ref|NP_247771.1| biotin synthase [Methanocaldococcus jannaschii DSM 2661]
 gi|2496124|sp|Q58195|Y785_METJA RecName: Full=Uncharacterized protein MJ0785
 gi|1591485|gb|AAB98782.1| biotin synthetase, putative (bioB) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 375

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 72/249 (28%), Gaps = 22/249 (8%)

Query: 23  VHW-------PFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSI 74
           +H        P    KC YC F +   +    +        + +     + +G + +S  
Sbjct: 86  IHITNICHVNP----KCLYCGFAAGTSKEGYYEPFRLTDEEIKKSAIAIEESGIKRVSCS 141

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
              G      + + +   L  + K   +   V          +   + +  +K G++ I 
Sbjct: 142 SAHGY-----QGKEVIRALKIVKKYTNLEVLVNAGA-----DLTEESIKELKKYGIDTIC 191

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
             ++++ E   + +       + I    L       +S  L+  + +    + E      
Sbjct: 192 CNLETINENLFKKVKPGEELEDRIRVCKLVNKYDIELSTGLLIGIGESYEDRVEHLFYLK 251

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V  + +      KGT      K   L          L      ITS       E+ 
Sbjct: 252 NELNVGEIPIMGFNPYKGTPMENHPKCSALEQAKTIAITRLIFPNIRITSPTPTIGAELV 311

Query: 255 NHSFLGAES 263
             +  G  S
Sbjct: 312 QFALFGGAS 320


>gi|302343165|ref|YP_003807694.1| RNA modification enzyme, MiaB family [Desulfarculus baarsii DSM
           2075]
 gi|301639778|gb|ADK85100.1| RNA modification enzyme, MiaB family [Desulfarculus baarsii DSM
           2075]
          Length = 428

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 18/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGG------GT 80
           C   C YC            +   +   +   + M Q      + + I  G       G 
Sbjct: 150 CNAGCAYC---IVPATRGRPRSLPLAQAVAAFRGMAQAGAQEIVLTGIHLGRWGLDLAGK 206

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           P L   + +  +L    +     S++E   E  P  V                 L +QS 
Sbjct: 207 PRL--AELLEAMLAADDRPRLRLSSLESH-EIEPRLV---QLAAAEPRLCPHFHLPLQSG 260

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
           +++ L+ +GR ++A++    +       P   +  D++  LP +        L+   S  
Sbjct: 261 DDRVLKAMGRPYSAAQYAQVVRDLAAALPSPCLGADVLVGLPGEDHAAHRQTLELLESLP 320

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
           + +L ++  +   GT   +M 
Sbjct: 321 ISYLHVFPYSPRPGTRAVEMP 341


>gi|304318126|ref|YP_003853271.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779628|gb|ADL70187.1| Radical SAM domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 432

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 56/193 (29%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     +RR  +  E +       +Q  ++L      + I   G  P      
Sbjct: 153 CRKNCFYCG----LRRDNLSVERYRMDIDEIVQTAKELKKMGIRTVILQSGEDP------ 202

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                   I     +     + I  +        ++ +R+AG N   L +++   +  + 
Sbjct: 203 -WYTEDKIIEIIKKIKKETNMRITLSIGERNQEEYKHFREAGANNFLLKIETTNREIFKN 261

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +  + +    +      R          I  LP QT      ++       +  + +   
Sbjct: 262 IHPDDDFDYRVKCSEWLRENGYVNGNGNIIGLPGQTARDIAKDILFFKDMGIHMVGIGPF 321

Query: 208 TIEKGTLFYKMHK 220
               GT       
Sbjct: 322 VPATGTPLETYPH 334


>gi|227498989|ref|ZP_03929126.1| Fe-hydrogenase assembly protein [Acidaminococcus sp. D21]
 gi|226904438|gb|EEH90356.1| Fe-hydrogenase assembly protein [Acidaminococcus sp. D21]
          Length = 374

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 61/199 (30%), Gaps = 19/199 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F   +   +   +     R         G+ +L   +
Sbjct: 68  CIKNCKYCG----IRRDNEEVERFDTPYEDLLAMAKWAYDER--------YGSLTLQSGE 115

Query: 88  NIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                     +   +         + +           ++ + +AG +R  L +++    
Sbjct: 116 RQDEEFIAYVERLILDIKKIGGGALGLTLCVGEQTEETYRRWFEAGAHRYLLRIETSNPA 175

Query: 144 SLRFLG---RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             R L     +H        +   + I  ++    +  LP QT+     +++      +D
Sbjct: 176 LYRTLHPQDGHHKWEVRRDCLKTLKKIGYQVGTGDMMGLPGQTLDDLACDIEFFRHMDID 235

Query: 201 HLSLYQLTIEKGTLFYKMH 219
            + +    +   T   K  
Sbjct: 236 MIGMGPYVVHHNTPIGKHV 254


>gi|39995550|ref|NP_951501.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39982313|gb|AAR33774.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
          Length = 354

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 57/189 (30%), Gaps = 14/189 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C F     R +   + ++ +       + +L        +  GG  P  +   
Sbjct: 63  CESKCKFCAFY----RDEAAPDAYLLAEEAIFAKIAELVEHGGTQLLMQGGLHP-QLGID 117

Query: 88  NIALILDGIA------KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSL 140
               +  GI       +N ++S      I            +  R+AG++ I   G + L
Sbjct: 118 WFEDLFRGIKARFPQVQNHSLSPAEITQIATVSKLTIPETVRRLREAGLDSIPGGGAEIL 177

Query: 141 EEQSLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            +   + +  R        A +  A       +  +++   ++T       L R      
Sbjct: 178 VDSVRQEISPRKIGWEGWAAVMSEAARQGMATTATMMFG-SRETPEDIVEHLFRVRELQA 236

Query: 200 DHLSLYQLT 208
              S     
Sbjct: 237 AGGSFTAFI 245


>gi|33866174|ref|NP_897733.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. WH 8102]
 gi|81574233|sp|Q7U5R0|MIAB_SYNPX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|33639149|emb|CAE08155.1| 2-methylthioadenine synthetase [Synechococcus sp. WH 8102]
          Length = 460

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 17/235 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC   S   + +      I+  +  +       G + I+ +      +G   P 
Sbjct: 161 CNERCTYCVVPSVRGKEQSRLPEAIRLEMEGLAAQ----GYKEITLLGQNIDAYGRDLPG 216

Query: 83  LIEP-QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +    +    + D + +   VS    I     +P                      +  Q
Sbjct: 217 ITPEGRRQHTLTDLLHQVHDVSGIKRIRFATSHPRYFTERLIDACADLPKLCEHFHIPFQ 276

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   LR + R +        I   R   P   +S D+I A P +T  Q++  L     
Sbjct: 277 SGDNDVLRAMARGYTVERYRRIIDRIRERMPDASLSADVIVAFPGETDLQYQRTLDLIEE 336

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D ++    +    T       D  L    + + +   N      +      Y
Sbjct: 337 IGFDQVNTAAYSPRPNTPAAT--WDNQLPEEVKVIRLQTINALVERCARERNARY 389


>gi|307243664|ref|ZP_07525804.1| iron-only hydrogenase maturation rSAM protein HydE
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492873|gb|EFM64886.1| iron-only hydrogenase maturation rSAM protein HydE
           [Peptostreptococcus stomatis DSM 17678]
          Length = 350

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 72/192 (37%), Gaps = 16/192 (8%)

Query: 27  FCVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C ++C YC    FN  V+RY++ ++  + +     +      G R+   +  GG  P  
Sbjct: 65  YCKRECKYCGINTFNRDVKRYRMTKKEIVDTCKEGYKL-----GFRTF--VLQGGEDP-Y 116

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + I  I+  + K +    +V IT+      +   +++  + AG +R  L  ++    
Sbjct: 117 FTDKRICDIVKAVKKLF---PDVAITLSLGERPI--ESYRAMKFAGADRFLLRHETSNPG 171

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R+L    +    I  ++  +    +     +  LP  T   +  +L+       + + 
Sbjct: 172 LYRWLHPFSSLDSRIGCLYSLKYTGFQTGAGFMVGLPWYTNKDYAHDLRFLKDLEPEMIG 231

Query: 204 LYQLTIEKGTLF 215
           +        T  
Sbjct: 232 IGPFIPHSSTSM 243


>gi|303245646|ref|ZP_07331929.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302492909|gb|EFL52774.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 332

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 11/188 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +RR   G   + +  + ++     L G  SI ++    G       +
Sbjct: 46  CANNCRYCG----LRRANRGLARY-RMDVDDILVATALAGEVSIGTVVLQSGDDFAYSKE 100

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +I  I+ G   +  V+  V +++   P      +   +R  G +R  L +++ +E     
Sbjct: 101 DIGRIVTGAKASSGVA--VTLSLGDRP----AADLDYWRSCGADRYLLKMETFDEALYAR 154

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
                  ++ +  I   R     +   +I  LP  T+     +L R     +D ++    
Sbjct: 155 SRPGLTVADRLGRIETLRAAGYEVGSGIITDLPGMTLDILARDLLRLAELDLDMIAAGPF 214

Query: 208 TIEKGTLF 215
                T +
Sbjct: 215 VPHPDTPY 222


>gi|312898810|ref|ZP_07758198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Megasphaera
           micronuciformis F0359]
 gi|310619972|gb|EFQ03544.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Megasphaera
           micronuciformis F0359]
          Length = 453

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 16/219 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C YC    +VR  +V +          ++ +R L           G    S  ++ 
Sbjct: 143 CNKFCTYC-IVPYVRGREVSRP-----LEEIIEEIRNLAKEGYKEITLLGQNVNSYGLDF 196

Query: 87  QNIALILDGIAKNWTVSSNVEIT-IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
           ++       +     +     +  + ++P  +         +    V+ I L VQS   +
Sbjct: 197 KDGTDFSALLYAIEDIDGIERVRYMTSHPKDMTFTMIDAIAQCKKVVSHIHLPVQSGSTE 256

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +        +   R   P+  ++ D+I   P +T   ++  L        D 
Sbjct: 257 LLKRMNRGYTTEHYEELVSYIREKMPQAVLTTDIIVGFPGETEAMFQETLDLLRRVRYDM 316

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              +  +   GT    M    D  +P +  +  L  L  
Sbjct: 317 AYTFIYSPRTGTPAATM----DNQIPQDEKSRRLKRLAD 351


>gi|297568548|ref|YP_003689892.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924463|gb|ADH85273.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 363

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 4/173 (2%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+  C +C F         G+    +    +++  +QL G + +         P      
Sbjct: 76  CISACKFCAFFK-APEDPAGEILNREELGRKIEETKQLGGNQILLQGGLHPDQPLEFYED 134

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSLEEQSLR 146
            ++ I          S        A             + AG++ +   G + L ++  R
Sbjct: 135 MLSFIKSYGIHVHGFSPPEIHHFAALAGIGTREVLVRLQAAGLDSMPGGGAEILADRVRR 194

Query: 147 FLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  R  NA + IA +  A  +  R +  +++    +TM +    LQR     
Sbjct: 195 EIAPRKCNADQWIAVMEQAHELGMRTTATMMFGHI-ETMAERVEHLQRIRDLQ 246


>gi|217979028|ref|YP_002363175.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Methylocella
           silvestris BL2]
 gi|217504404|gb|ACK51813.1| RNA modification enzyme, MiaB family [Methylocella silvestris BL2]
          Length = 490

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P+ +     + +R     +  + L VQS  +  L  + R H ++  IA     R  
Sbjct: 269 TTSHPNDMGEALIEAHRAQPKLMPFLHLPVQSGSDAVLAAMNRKHTSAGYIALCRRIRAA 328

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +  S D I   P +T   +E  LQ            ++ +   GT   + 
Sbjct: 329 RPDIALSSDFIVGFPGETDADFEATLQLIEDVGYASAFSFKYSPRPGTPGAER 381


>gi|257060026|ref|YP_003137914.1| radical SAM protein [Cyanothece sp. PCC 8802]
 gi|256590192|gb|ACV01079.1| Radical SAM domain protein [Cyanothece sp. PCC 8802]
          Length = 471

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 88/239 (36%), Gaps = 30/239 (12%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGGTPS 82
           C   C +C    F      Y+ G+  + Q     +  + +L G     +    FG     
Sbjct: 170 CPHHCDFCYKDAF------YQPGKSFYTQPVDDALAEIEKLPGKHLYFLDDHLFGHEAF- 222

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                 +   + G+ + W  ++ V+  ++           +   + G+  + +G ++L+ 
Sbjct: 223 ---ASALFEGMKGMGRVWQAAATVQSILQ-------PGLLEKAVECGLRSLFVGFETLDF 272

Query: 143 QSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            +L+   + HN +   + AI    +    ++   ++ + +   T ++  +  A+S  ++ 
Sbjct: 273 NNLKEQHKYHNLNRDYSLAIKRLHDHGVMVNSSFVFGMDEDDETVFDRTVDWAISQGIET 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSE-------NVAVDLYNLTQSITSAHGLHAYEI 253
            + + LT   GT  Y+   +   +L +        +V      L+     A   +AY  
Sbjct: 333 ATFHILTPYPGTPLYQRMVEQGRILTNNWDLYDTRHVVYRPSKLSIETLEAGYWNAYRN 391


>gi|15920235|ref|NP_375904.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase 66
           kd subunit [Sulfolobus tokodaii str. 7]
 gi|15621017|dbj|BAB65013.1| 532aa long hypothetical magnesium-protoporphyrin ix monomethyl
           ester oxidative cyclase 66 kd subunit [Sulfolobus
           tokodaii str. 7]
          Length = 532

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 61/190 (32%), Gaps = 9/190 (4%)

Query: 32  CPY-CDFNSHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           CPY CDF S    +    +       L E+   ++L               P+  +   +
Sbjct: 207 CPYACDFCSVTPTWGNKWRNKSNNRILKEISKAKELGYNWIFFVDDIFIVWPNRSQRAAL 266

Query: 90  ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
              +          + +   + A          +    AG+    LG++S  ++ L+ + 
Sbjct: 267 FRKMIETKNTINFIAQMRADVTAR----NPELIKLASDAGLRIAFLGIESGSQEVLKKMH 322

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY---AVDHLSLYQ 206
           +    S++I A+         +   L+   P +T+      ++ +        D +    
Sbjct: 323 KGLAVSDSINAVKTLHENGVIVLVGLMIGAPYETIKDIRATVKLSRKLADVGADAVQFSI 382

Query: 207 LTIEKGTLFY 216
            T   GT  +
Sbjct: 383 YTPLPGTRIF 392


>gi|329956412|ref|ZP_08297009.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides clarus YIT
           12056]
 gi|328524309|gb|EGF51379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides clarus YIT
           12056]
          Length = 455

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 69/238 (28%), Gaps = 18/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E       + +  +  L           G    S    +
Sbjct: 171 CNNFCTYC-----IVPYTRGRERSRD-VESILNEVADLVAKGYKEVTLLGQNVNSYRFEK 224

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               ++   A   TV+ +          ++P  +     Q   +       I L VQS  
Sbjct: 225 ADGEVITFPALLRTVAESAPGVRIRFTTSHPKDMSDETLQVIAEVPNVCKHIHLPVQSGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R I P   +S D+      +T     + L        
Sbjct: 285 SRILKLMNRKYTREWYLERVDAIRRIIPDCGLSTDIFSGFHSETEEDHRLSLSLMEECGY 344

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPS----ENVAVDLYNLTQSITSAHGLHAYEI 253
           D   +++ +   GT   K   D             +      L+    +      YE+
Sbjct: 345 DAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQNRLSAEANARCVGKTYEV 402


>gi|260774885|ref|ZP_05883786.1| tRNA-i(6)A37 methylthiotransferase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609140|gb|EEX35298.1| tRNA-i(6)A37 methylthiotransferase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 474

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 72/229 (31%), Gaps = 18/229 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C K C YC                +   L E+  + +  G R ++ +         P+  
Sbjct: 157 CSKYCTYC---VVPYTRGEEVSRPMDDVLFEIAQLAEQ-GVREVNLLGQNVNAYRGPT-- 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
              +I    + +    ++     I     +P     +    Y      V+ + L VQS  
Sbjct: 211 HEGDICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R H   E  + I   R   P +  S D I   P ++    +  ++       
Sbjct: 271 DRILTMMKRPHTGIEYKSIIRKLRKARPDIQISSDFIVGFPGESDMDHQATMKLIKDVDF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           D    +  +   GT       D    L  +     LY L Q++ +    
Sbjct: 331 DMSFSFIFSPRPGTPAA----DYPCDLSEQTKKERLYELQQTVNAQAMR 375


>gi|239904819|ref|YP_002951557.1| hypothetical protein DMR_01800 [Desulfovibrio magneticus RS-1]
 gi|239794682|dbj|BAH73671.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 331

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N+ V RY++  E+ I            L    SI +I    G     
Sbjct: 46  CRNNCRYCGLRVANTAVHRYRLSVEDVIAC--------AGLARELSIGTIVIQSGDDFHY 97

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
              +IA I+        V+  + +   A+      +    +R+ G +R  L V++ +E  
Sbjct: 98  TRDDIARIVVEAKARADVAVTLSLGDRAD------DELLFWREHGADRYLLKVETFDEAL 151

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
                     ++ +A +   R     +   +I  LP  T      +L R     +D +++
Sbjct: 152 YAQSRPGLTLADRLARLETLRRAGYEVGSGVITDLPGMTPEILANDLVRLAELDLDMVAV 211

Query: 205 YQLTIEKGTLFYKMH 219
                   T +    
Sbjct: 212 GPFVPHPATPYGDAP 226


>gi|284032611|ref|YP_003382542.1| RNA modification enzyme, MiaB family [Kribbella flavida DSM 17836]
 gi|283811904|gb|ADB33743.1| RNA modification enzyme, MiaB family [Kribbella flavida DSM 17836]
          Length = 497

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 73/225 (32%), Gaps = 13/225 (5%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 131 LESLDVFPSTLPARRESAYSAWVSVSVGCNNTCTFC----IVPALRGREKD--RRPGDVL 184

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL-IEPQNIALILDGIAKNWTVSSNVEITI-EANPSSV 117
             ++ L     +     G    S  +E  +       +     +     +     +P   
Sbjct: 185 AEVQALVAEGVLEVTLLGQNVNSYGVEFGDRYAFSKLLRACGEIDGLERVRFTSPHPRDF 244

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSF 173
             +  +   +    +  + + +QS  ++ L+ + R++     +  I    A      ++ 
Sbjct: 245 TADVIEAMAETPNVMPSLHMPLQSGSDRILKTMRRSYRRDRYLKIISDVRAAMPDAAITT 304

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           D+I   P +T   ++  L             +Q +   GT    M
Sbjct: 305 DIIVGFPGETEQDFQGTLDVVRQARFAGAFTFQYSKRPGTPAESM 349


>gi|212551080|ref|YP_002309397.1| Fe-S oxidoreductase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
 gi|212549318|dbj|BAG83986.1| putative Fe-S oxidoreductase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 433

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 61/191 (31%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I   +          G + I       G       +
Sbjct: 155 CDYTCSYC---TIPLARGKSRNRKISDLVRN-SMQLGAKGVKEIVLTGVNIGDFGKSTGE 210

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQ--GYRKAGVNRISLGVQSLEEQSL 145
           N   +L  + K   +S     +IE  P+ +     +   +    V    + +QS  +  L
Sbjct: 211 NFLDLLRDLDKVENISRFRISSIE--PNLLSDEIIEFVAFSDRFVPHFHIPLQSGSDAVL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R ++     + I   + +     + FD+I  +  +T   +    +   S     L 
Sbjct: 269 RLMNRKYDIVLLRSKIEKIKTLMTDAFIGFDIIVGMRGETDEYFRESQKFLESLPFSQLH 328

Query: 204 LYQLTIEKGTL 214
           ++  +    T+
Sbjct: 329 VFTYSERPATM 339


>gi|218961950|ref|YP_001741725.1| putative enzyme with radical SAM domain protein (Fe-S
           oxidoreductase) [Candidatus Cloacamonas acidaminovorans]
 gi|167730607|emb|CAO81519.1| putative enzyme with radical SAM domain protein (Fe-S
           oxidoreductase) [Candidatus Cloacamonas acidaminovorans]
          Length = 460

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 83/252 (32%), Gaps = 21/252 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC         K  +  +  +   +MQ + ++L    S           S    
Sbjct: 168 CPFACIYC----LSANDKRSELRYQPNNQKDMQCLNKELETLISFQPRTIKFVDRSFNLH 223

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI--SLGVQSLEEQS 144
           + +A  +             ++  E  P  +E ++     KA  NRI   +G+Q++  + 
Sbjct: 224 KQLAHYIWKFFMEQNCP--CDVHFEIYPDLLEEDDIALLEKAPENRIRWEIGIQTINSEV 281

Query: 145 LRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               GR  N  +    +  L +     +  DL+  LP +        L    +   D + 
Sbjct: 282 ALNCGRKSNWEKTKWVLQELKKRTKVHIHTDLLAGLPGENYASVLNGLNEVCAILPDAVQ 341

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           L  L I   T   K+  + +    S+        L+    S   +   E  N +      
Sbjct: 342 LGILKILPDTPMQKIASELNYKWLSQP---PYQCLSSDALSFEEIQQLE--NFAK----- 391

Query: 264 LHNLNYWRYGDY 275
           L NL YW   +Y
Sbjct: 392 LLNL-YWNKEEY 402


>gi|218246963|ref|YP_002372334.1| Radical SAM domain-containing protein [Cyanothece sp. PCC 8801]
 gi|218167441|gb|ACK66178.1| Radical SAM domain protein [Cyanothece sp. PCC 8801]
          Length = 471

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 88/239 (36%), Gaps = 30/239 (12%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR--SISSIFFGGGTPS 82
           C   C +C    F      Y+ G+  + Q     +  + +L G     +    FG     
Sbjct: 170 CPHHCDFCYKDAF------YQPGKSFYTQPVDDALAEIEKLPGKHLYFLDDHLFGHEAF- 222

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                 +   + G+ + W  ++ V+  ++           +   + G+  + +G ++L+ 
Sbjct: 223 ---ASALFEGMKGMGRVWQAAATVQSILQ-------PGLLEKAVECGLRSLFVGFETLDF 272

Query: 143 QSLRFLGRNHNASEAIA-AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            +L+   + HN +   + AI    +    ++   ++ + +   T ++  +  A+S  ++ 
Sbjct: 273 NNLKEQHKYHNLNRDYSLAIKRLHDHGVMVNSSFVFGMDEDDETVFDRTVDWAISQGIET 332

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSE-------NVAVDLYNLTQSITSAHGLHAYEI 253
            + + LT   GT  Y+   +   +L +        +V      L+     A   +AY  
Sbjct: 333 ATFHILTPYPGTPLYQRMVEQGRILTNNWDLYDTRHVVYRPSKLSIETLEAGYWNAYRN 391


>gi|152149498|pdb|2QGQ|A Chain A, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149499|pdb|2QGQ|B Chain B, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149500|pdb|2QGQ|C Chain C, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149501|pdb|2QGQ|D Chain D, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149502|pdb|2QGQ|E Chain E, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149503|pdb|2QGQ|F Chain F, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149504|pdb|2QGQ|G Chain G, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
 gi|152149505|pdb|2QGQ|H Chain H, Crystal Structure Of Tm_1862 From Thermotoga Maritima.
           Northeast Structural Genomics Consortium Target Vr77
          Length = 304

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 70/240 (29%), Gaps = 36/240 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--------QENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C   S     +           E+ ++    E+  + Q T    I        
Sbjct: 14  CDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQAL 73

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                 P  +  +     + W            +P  +         +    V    + V
Sbjct: 74  ------PDLLRRLNSLNGEFWIR------VXYLHPDHLTEEIISAXLELDKVVKYFDVPV 121

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ L+  GR  ++ E    +   R  FP       +I   P +T   +E   Q   
Sbjct: 122 QHGSDKILKLXGRTKSSEELKKXLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVE 181

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
               D L  +  + E+GT+ + + +  D                +       L   EISN
Sbjct: 182 EIQFDKLGAFVYSDEEGTVAFNLKEKVDP------------EXAKRRQEELLLLQAEISN 229


>gi|251777874|ref|ZP_04820794.1| putative cobalamin-dependent enzyme [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243082189|gb|EES48079.1| putative cobalamin-dependent enzyme [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 554

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 64/227 (28%), Gaps = 26/227 (11%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLI 84
           C   C YC    SH  R+ +  E  ++     +    +L     R+ +            
Sbjct: 183 CPFNCKYCLSSTSHGVRF-LSIERVLKELQYFIDKKVRLVKFVDRTFNCNHK-------F 234

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
                  +++   +            E +   ++    +   KA   R     GVQ+  +
Sbjct: 235 SMAIWKFLIESNTETK-------FHFEISADILKEEEIKLLSKAPKGRFQFEVGVQTTND 287

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R  N  +    +         +    DLI  LP +    +            +
Sbjct: 288 KVLNNINRFVNFEDIKEKVDELM-AIKNIQQHLDLIAGLPGEDYESFVNSFNDVYKIRPE 346

Query: 201 HLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + L  L + KG+      + ++      P   +          +  
Sbjct: 347 EIQLGFLKLLKGSSMREEAEKYEMKFSPYPPYEILKTDCINYDELLK 393


>gi|190570899|ref|YP_001975257.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019415|ref|ZP_03335221.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357171|emb|CAQ54586.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994837|gb|EEB55479.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 408

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 72/201 (35%), Gaps = 9/201 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C +C   S        +   + + + +++   +      + + +        L   
Sbjct: 134 CNHSCTFC---SITEARGNNRSVPVNNIIEQIKIFIENGYQEVVFTGVDITDFGTDLFGK 190

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           Q++  ++  + K+      + ++   + + V+             +  + L +QS     
Sbjct: 191 QSLGSMVRRVLKDIPQLKRLRLS-SIDVAEVDDELMDLIANESRLMPHLHLSLQSGNNLI 249

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R HN  + I   H  +++ P +    D+I   P +T   ++  +       V +L
Sbjct: 250 LKRMKRRHNREQVIEFCHKMKSLRPNIAFGADIIAGFPTETDEMFQDTVDLLKKINVVYL 309

Query: 203 SLYQLTIEKGTLFYKMHKDGD 223
             +  +  K T   +M +  +
Sbjct: 310 HAFPYSERKNTPAARMPQISE 330


>gi|118443956|ref|YP_878198.1| tRNA modifying protein [Clostridium novyi NT]
 gi|238065369|sp|A0Q0P6|RIMO_CLONN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|118134412|gb|ABK61456.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium novyi
           NT]
          Length = 444

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 68/223 (30%), Gaps = 17/223 (7%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y+     C   C YC     + + +     +    +  +    +      +  +   G  
Sbjct: 148 YIRISEGCNNLCTYC----IIPKIRGK---YRSRSIESIINEAKELANMGVKELILVGQD 200

Query: 81  PSLIEPQNI--ALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRIS 134
            ++          +   + +   +  ++E    +   P  +     +  +        + 
Sbjct: 201 TAIYGSDLYKENRLSQLLRELSNI-EDIEWIRILYTYPEEITDELIEEIKNNDKVCKYLD 259

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           + +Q +    L+ + R  +       I   R     +     +I   P +T  ++    +
Sbjct: 260 IPIQHISNTVLKRMNRKSSKELITDNIKKMRKEIDGLCLRTSIIVGFPGETEDEFNELKE 319

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
                  D+L +++ + E+ T   +M       L  E +A  +
Sbjct: 320 FVEEIKFDNLGVFKYSQEEDTAAARMKDQVSEDLKEERLATIM 362


>gi|217077525|ref|YP_002335243.1| hypothetical protein THA_1459 [Thermosipho africanus TCF52B]
 gi|238066615|sp|B7ID25|RIMO_THEAB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|217037380|gb|ACJ75902.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
          Length = 427

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 23/201 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C +C        F S      V +  + I S   E+  + Q T    I        
Sbjct: 145 CDRACSFCTIPLFKGSFKSRKIDDIVKEVEYLILSGKKEIILVAQDTTGYGIDLYGKQ-- 202

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQ 138
               + P+ +  I D     W         +  +P  +     + +    V +   + VQ
Sbjct: 203 ----MLPELLKRINDIPGDFWIR------VMYMHPDHITDEIIEAFSYDKVLKYFDIPVQ 252

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              ++ L+ + R   +   +  +   R  +        +I   P +T   +E  L     
Sbjct: 253 HGSDKVLKLMNRTKKSEHILKLVEKIRKRYEDAVLRTSIIVGFPGETDEDFEELLDFIKM 312

Query: 197 YAVDHLSLYQLTIEKGTLFYK 217
              + L  +  + E+    Y 
Sbjct: 313 VRFERLGAFIYSDEEEAPSYH 333


>gi|189426248|ref|YP_001953425.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ]
 gi|238066235|sp|B3EAM2|RIMO_GEOLS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|189422507|gb|ACD96905.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ]
          Length = 449

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 70/199 (35%), Gaps = 10/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +   +++ + E +  ++       + S         + + 
Sbjct: 161 CSNCCTYC---VIPSLRGPYRSRPVEALVAEAERLVKGGVRELILVSQDITRYGSDMDDT 217

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            ++A ++  +A    +       + A P  +     + ++      N + + +Q + +  
Sbjct: 218 SSLAGLIRRLAAIEDLKWIR--LLYAYPDGISDELIELFKTEPKLCNYLDIPIQHISDNV 275

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R  +  +    I   RN  P ++    LI   P +T+  +    Q       D L
Sbjct: 276 LQRMKRRSSEEQIRTLIARLRNEIPGITLRTSLIVGFPGETVDDFLNLTQFVEKAQFDRL 335

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            ++  + E+GT   +M   
Sbjct: 336 GVFCYSREEGTPAAEMPDQ 354


>gi|317490514|ref|ZP_07948992.1| MiaB-like tRNA modifying enzyme YliG [Eggerthella sp. 1_3_56FAA]
 gi|316910365|gb|EFV31996.1| MiaB-like tRNA modifying enzyme YliG [Eggerthella sp. 1_3_56FAA]
          Length = 455

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 24/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYK--------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C + C YC       RY+              + +   E+  + Q TG            
Sbjct: 175 CDRFCTYCTIPYIRGRYRSFPLDDVRADVAAQVAAGAREIVLIAQDTGRWGADFDE---- 230

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            PS        L     A            +   P  +               +   + +
Sbjct: 231 -PSS-------LAALVAALAEEFPQTWFRIMYIQPEGLSDELLDAVAAHDNVCDYFDIPL 282

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
           Q ++   LR + R  +  E +A +   LA      +   LI   P +T  Q+E       
Sbjct: 283 QHVDAGILRAMNRTGSREEFLALVGRVLAHVPGATLRTTLIAGFPGETEEQFEDLCSFVE 342

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               D++ ++  + E+GT  + +    D
Sbjct: 343 EGLFDYVGVFPYSREEGTRAFDLPGQLD 370


>gi|187933907|ref|YP_001887055.1| radical SAM protein [Clostridium botulinum B str. Eklund 17B]
 gi|187722060|gb|ACD23281.1| putative cobalamin-dependent enzyme [Clostridium botulinum B str.
           Eklund 17B]
          Length = 554

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 65/227 (28%), Gaps = 26/227 (11%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLI 84
           C   C YC    SH  R+ +  E  ++     +    +L     R+ +  +         
Sbjct: 183 CPFNCKYCLSSTSHGVRF-LNIERVLKELQYFIDKRVRLVKFVDRTFNCNYK-------F 234

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
                  +++         +  +   E +   ++    +   KA   R     GVQ+  +
Sbjct: 235 SMAIWKFLIEA-------DTETKFHFEISADILKDEEIKLLSKAPKGRFQFEVGVQTTND 287

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R  N  +    +         +    DLI  LP +    +            +
Sbjct: 288 TVLNNINRFVNFEDIKEKVDELM-AIKNIQQHLDLIAGLPGEDYESFINSFNDVYKIRPE 346

Query: 201 HLSLYQLTIEKGTLF---YKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            + L  L + KG+      + +K      P   +          +  
Sbjct: 347 EIQLGFLKLLKGSSMREEAEKYKMKFSPYPPYEILKTDCINYDELLK 393


>gi|62484828|emb|CAI78845.1| oxygen-independent coproporphyrinogen iii oxidase [uncultured
           bacterium]
          Length = 387

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 49/259 (18%)

Query: 7   YENNMTGQGSNSLGVYVHW----PFCVKKCPYCDFNSHVRRYKVGQE---NFIQSFLTEM 59
           +E       S +  + V      P+   +C +C      +      +     I +    +
Sbjct: 12  FEQGPIRPPSEAYSLLVRVTRNCPW--NRCSFCPVYKGTKFSLRPVDHVKRDIDAVYRHV 69

Query: 60  QWMRQLTGPR------SISSIF------------------FGGGTPSLI---------EP 86
           + +RQLTG R       I  +                   FGGG  S+          +P
Sbjct: 70  ERLRQLTGERGRIGQDQIDKLAENVERQESLAFAAALNWLFGGGLKSVFLQDANSLVIKP 129

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
            ++  IL  + K     S   IT  A   +V   + ++ +  R +G+NR+ +G++S  ++
Sbjct: 130 HDLVEILTHLRKR--FPSVERITSYARSHTVARRKDDDLRAIRDSGLNRLHIGLESGSDE 187

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDH 201
            L+ + +       + A   AR     +S   +  L  +  +        +       D 
Sbjct: 188 VLKAVSKGCTKQMHVEAGLKARRAGFEVSEYFMPGLGGRALSYAHALESAEALSRINPDF 247

Query: 202 LSLYQLTIEKGTLFYKMHK 220
           + L  L I  G    + ++
Sbjct: 248 IRLRALAIPNGAPLAEDYR 266


>gi|51246808|ref|YP_066692.1| hypothetical protein DP2956 [Desulfotalea psychrophila LSv54]
 gi|50877845|emb|CAG37685.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 434

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 62/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC            +   +   + + +   +     ++ + I  G     L   
Sbjct: 154 CQSFCTYC---IVPFTRGPSRSLPLDEVIAQTRAFAEEGYQETVLTGIHIGEWGHDLKGG 210

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQS 144
           +    +LD ++           ++E  P+ +     +    R      + + +QS  +Q 
Sbjct: 211 ETFTDLLDRLSAEVPQMRFRISSLE--PTEINARILELIKTRANIFPHLHIPLQSGSDQI 268

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R+++ +     I       P   +  D++   P ++   +             +L
Sbjct: 269 LARMNRHYDTARFAGIIEACHQAIPNLCIGIDVLAGFPGESEEHFASAYSFLQKLDFTYL 328

Query: 203 SLYQLTIEKGT 213
            ++  +I  GT
Sbjct: 329 HVFPYSIRPGT 339


>gi|295092643|emb|CBK78750.1| iron-only hydrogenase maturation protein HydE [Clostridium cf.
           saccharolyticum K10]
          Length = 399

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 67/201 (33%), Gaps = 24/201 (11%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGG---- 79
           +C   C YC     +RR       +       L+  +  R+L       +    GG    
Sbjct: 104 YCRNDCYYCG----IRRSNQEVSRYRLTPDEILSCCEEGRRLG----FRTFVLQGGEDLN 155

Query: 80  ---TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
                 L   + +A +++ I + +      +  +  +    +   ++ + +AG +R  L 
Sbjct: 156 FEGREGLRGDRALAKVVEEIKRRFP-----DCAVTLSVGERDREVYEQWFQAGADRYLLR 210

Query: 137 VQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            ++ +E+  R L     +       +   ++I  +    ++   P QT+     +L    
Sbjct: 211 HETADEEHYRRLHPTELSGQRRKECLRALKDIGFQTGAGMMVGSPGQTVRHLAEDLVFLR 270

Query: 196 SYAVDHLSLYQLTIEKGTLFY 216
               + + +        T F 
Sbjct: 271 ELQPEMVGIGPFLPHHATPFA 291


>gi|238066630|sp|Q2JSD0|RIMO_SYNJA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
          Length = 460

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 15/216 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C  +C +C     +   +  Q    I+S L E + +        I  S I    G    +
Sbjct: 166 CDYRCSFC----IIPHLRGKQRSRPIESILREAEQLAAEGVQELILISQITTNYG----L 217

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
           +      + + I     +       + A P+ +     +  ++    +  + L +Q    
Sbjct: 218 DLYGEPRLAELIRALGQIPIPWIRMLYAYPTGITPAVVEAIQETPNFLLYLDLPLQHSHP 277

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R          I   R   P+       I   P +T   ++  L+    +  D
Sbjct: 278 AILKAMNRPWQGQVNDRLIERLRQALPKAVLRTSFIVGFPGETEEHFQHLLEFVQRHQFD 337

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           H+ ++  + E+GT  Y + +     L  E  A  + 
Sbjct: 338 HVGVFTFSPEEGTPAYHLPQQVPEPLKEERRARLMQ 373


>gi|68445550|dbj|BAE03259.1| hypothetical conserved protein [unclutured Candidatus Nitrosocaldus
           sp.]
          Length = 454

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 79/201 (39%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+ +C +C   + + + ++      + ++    +++   +     S  +  +G    +  
Sbjct: 150 CLSECTFC--ETRIAKGRLTSYRIGDIVRQVREDVEQGCREVWLTSTDNGAYGRDIGT-- 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAGV-NRISLGVQS 139
              N+  ++  +    ++ +   I +   NP  +     +  + YR   V   I + VQS
Sbjct: 206 ---NLVELIKAV---CSIDAEFMIRVGMMNPQYLPLMLDDLIEAYRDDKVFKFIHIPVQS 259

Query: 140 LEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ LR + R H AS  I  +           ++ D+I   P ++   ++  +   L  
Sbjct: 260 GSDRVLRLMRRGHRASTFIDMVKRFRRELKLCTIATDMIVGFPSESEEDFDASIDLLLEV 319

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D +++ + +   GT   +M
Sbjct: 320 EPDIVNVSKYSARPGTEASRM 340


>gi|219682347|ref|YP_002468731.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB (YleA) [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219622080|gb|ACL30236.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB (YleA) [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|311086744|gb|ADP66825.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
          Length = 439

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGGTPSLIE 85
           C K   YC F                  L E+  + +  +     +         P+   
Sbjct: 156 CNK---YCSFCVVPYTRGNEISRPCDDVLFEISLLAKQGIKEINLLGQNVNAYQGPTF-- 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +    + I     +     I     NP     +  + Y+     V+ + L VQS   
Sbjct: 211 NGKVCYFSELIRLVAEIDGIERIRFTTSNPLEFTDDIIEVYKDTPKLVSFLHLPVQSGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R++   +  + I       P +  S D I   P ++   +E  ++   +   D
Sbjct: 271 KILNLMKRSYTTEDYTSIIKKLTIARPDIQISSDFIVGFPGESEIDFEKTIEFIKNINFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL 224
               +  +   GT    M+ + DL
Sbjct: 331 MSFSFIYSARPGTPASNMNDNLDL 354


>gi|157364597|ref|YP_001471364.1| biotin synthase [Thermotoga lettingae TMO]
 gi|157315201|gb|ABV34300.1| Radical SAM domain protein [Thermotoga lettingae TMO]
          Length = 346

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 65/194 (33%), Gaps = 18/194 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +V+RY++  +         +    ++     + +I    G    
Sbjct: 61  YCRNDCLYCGIRASNRNVKRYRMKADE--------IIHRARVIYQMGVKTIVLQSGEDLF 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + ++IA ++  I K         + +  +        ++ ++++G +R  +  ++ +EQ
Sbjct: 113 YDEESIAYVIKEIKKMK-------VAVTLSIGERTYEEYRYWKESGADRYLMRHETADEQ 165

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               +    +    I  +   + +   +    +  LP Q       ++        D + 
Sbjct: 166 IYEKMHPGDSLQNRIEHLRKLKQLGYEIGAGSMVGLPGQNDYSLAKDVLFVYELDADMVG 225

Query: 204 LYQLTIEKGTLFYK 217
           +        T    
Sbjct: 226 IGPFIPHPNTPLSN 239


>gi|83309185|ref|YP_419449.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
 gi|82944026|dbj|BAE48890.1| Fe-S oxidoreductase [Magnetospirillum magneticum AMB-1]
          Length = 629

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 61/203 (30%), Gaps = 25/203 (12%)

Query: 25  WPF---CVKKCPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
            P    CV +C +C  F+  +R   V            M+ +  L     +  I FG   
Sbjct: 222 IPGAKGCVARCTFCHRFDKGIRYIPVD---------RIMRQIEILVRDHDVGFISFGDEN 272

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
                  +   + +  A+   +     +      + V        + AG   I+ G+++ 
Sbjct: 273 FGT----DKRWLAELCARLKPLDLLWRVG-GMRVNCVSPEIIAMMQDAGCRFIAYGMETG 327

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA------ 194
             + L  + +     +   AI             ++  +P +T    +  ++        
Sbjct: 328 SPRMLEVMEKKTTIEDNRNAIRWTIEAGIAAPIQIVLGMPGETSETVQETIEFCKHGQTF 387

Query: 195 -LSYAVDHLSLYQLTIEKGTLFY 216
                 + LS+       GT  Y
Sbjct: 388 RPEQNPNDLSINYAQALPGTPLY 410


>gi|300087155|ref|YP_003757677.1| radical SAM domain-containing protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299526888|gb|ADJ25356.1| Radical SAM domain protein [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 487

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 75/235 (31%), Gaps = 11/235 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C    +   +  G      +    +  +  L     I  I F     +     
Sbjct: 191 CPFRCTFC----YNSAFHAGYRGDFSA-ERIVSQVEHLQKEYGIEFIRFFEDNFTF---- 241

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           N   +             ++   EA  + +   +     KAG   + +GV++  ++ L F
Sbjct: 242 NRKRLHQFCKLIIDKKIKIKWDCEAR-ADLSEEDISLMAKAGCTAVGIGVETGSKRMLEF 300

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L +  +  E   +  L           ++ ALP +T+  + +                + 
Sbjct: 301 LKKGVDLDEMEKSFWLLVKYRISPRLYIMEALPTETIEDFNLTRDFLKKLDNPPFLYMRF 360

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVA-VDLYNLTQSITSAHGLHAYEISNHSFLGA 261
               GT  +    + +L+ P + +A    +    +  +       EI N++F   
Sbjct: 361 VPYAGTPLFNYCIENNLIEPPKTLADWPHFAFYSATRANLSEVPDEIINNAFAEY 415


>gi|220904772|ref|YP_002480084.1| biotin synthase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. ATCC 27774]
 gi|219869071|gb|ACL49406.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 331

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 63/190 (33%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +R      + +  S    ++         + + +   G     ++P+
Sbjct: 46  CRRNCLYCG----LRADNHRLQRYTLSRERILEAAAAAAAAGADTIVLQSGEY--AVKPE 99

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +A ++  I     +   + +  +          +  +++AG  R  L  ++ + +    
Sbjct: 100 WLARVIADIRSRSDLPVTLSVGEQP------AAAYALWKEAGAVRYLLKHETADAKLYAV 153

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L   H+  + IA +H   ++        +  LP Q       ++  A    V    +   
Sbjct: 154 LHPGHDLRQRIACLHTLASLGYECGSGFMVGLPGQRPESLADDILLARRLRVAMCGVGPF 213

Query: 208 TIEKGTLFYK 217
             +  T   K
Sbjct: 214 IPQAHTPLGK 223


>gi|15894909|ref|NP_348258.1| biotin synthase [Clostridium acetobutylicum ATCC 824]
 gi|15024589|gb|AAK79598.1|AE007672_5 Biotin synthase family enzyme [Clostridium acetobutylicum ATCC 824]
 gi|325509046|gb|ADZ20682.1| biotin synthase [Clostridium acetobutylicum EA 2018]
          Length = 350

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 65/191 (34%), Gaps = 18/191 (9%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N +++RY++  +         +  + +        ++    G     
Sbjct: 63  CKRNCMYCGLRRDNKNIKRYRLEPDE--------IIHLAKSAKNYGYQTVVLQSGEDDYY 114

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  I K         + I  +        ++ YRK+G +R  + +++ +++ 
Sbjct: 115 TVEKMKYIVSEIKKLN-------MAITLSIGEKTFEEYEEYRKSGADRYLIRIETTDKEL 167

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L    +    I  +   R +   +    +  LP QT+     ++        D + +
Sbjct: 168 YEKLDPKMSHENRINCLKNLRKLGYEVGSGCLVGLPNQTIESLADDILFFKEIDADMIGV 227

Query: 205 YQLTIEKGTLF 215
                 + T  
Sbjct: 228 GPFIPNEDTPL 238


>gi|26554249|ref|NP_758183.1| hypothetical protein MYPE7940 [Mycoplasma penetrans HF-2]
 gi|81747516|sp|Q8EUX4|MIAB_MYCPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|26454258|dbj|BAC44587.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
          Length = 491

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C YC     + R K+             Q + +     ++   ++   G      E
Sbjct: 209 CDKFCTYC--IVPMTRGKIRSRRKEDILDEVHQMISEGYKEVTLIGQNVNSYGIDFDNGE 266

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 +L+ +AK             +NP +   +     +K    +  I L +QS +E 
Sbjct: 267 NYLFNNLLEDVAKTGIERVRF---TTSNPWNFTRSIVDTMKKYPNIMPHIHLPIQSGDET 323

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R     + I  +   R   P  S   DLI   P +T  Q+   L+       D+
Sbjct: 324 ILKKMNRPMKIGDYIDLVDYIRANIPNCSITTDLIVGFPNETKEQFNKTLELYKRIEFDN 383

Query: 202 LSLYQLTIEKGT 213
              +  +   GT
Sbjct: 384 AFTFIYSKRDGT 395


>gi|328713992|ref|XP_003245232.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
           [Acyrthosiphon pisum]
          Length = 580

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 29/236 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------------LTGPRSISSIF 75
           C   C YC            +   ++S L E++++ +            +   R +S+  
Sbjct: 244 CDNMCTYC---IVPFTRGRERSRPVESILDEIKYLSEKGFKEVTLLGQNVNSYRDLSTSS 300

Query: 76  FGGGTPSLI---------EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY 125
           F   + + +         E +      + + +   V   + I     +P           
Sbjct: 301 FFMPSTNTLASGFKTVYKEKKGGVRFAELLNRVSDVDPEMRIRFTSPHPKDFPDEVLDII 360

Query: 126 RKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPK 181
            +       + L  Q    + L  + R +     ++     R+  P +  S D I     
Sbjct: 361 LEKPNVCKNLHLPAQCGSTEVLEKMRRGYTRESYLSLAQHIRDRLPGVTYSSDFIAGFCG 420

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
           +T  ++E  +    +    +  L+  ++ + T  Y+ +KD             ++N
Sbjct: 421 ETDEEFEDTISLMETVKYHNAFLFAYSMREKTTAYRRYKDDVPHEIKVERVKKMFN 476


>gi|85859383|ref|YP_461585.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Syntrophus aciditrophicus SB]
 gi|85722474|gb|ABC77417.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Syntrophus aciditrophicus SB]
          Length = 304

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 88/236 (37%), Gaps = 17/236 (7%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C      +R+K      I+SF    + +R+    RS+  +F   G   +I  
Sbjct: 39  CSHNKCTFCPLYK-DKRFK------IKSFQEIEEDIREAARYRSVGKVFLCDGDALIIPQ 91

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
           + +  I + I  N  +     I +  N  S+     +     +  G+  + LGV++   +
Sbjct: 92  KKLVPIFESI--NRNLRGVERIGLYGNAKSILRKTPDELVQLKNLGLKIVYLGVETGNSE 149

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +    S+ + A    +     +S  ++  +    ++M       +       D+
Sbjct: 150 LLEKIRKGVTYSQLVEAGRKVKEAGILLSVTVLLGIGGVEKSMEHARDTARILSDIDPDY 209

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
            S   L +  GT  Y     G  V+P +   +    +   +  ++    +  SNH+
Sbjct: 210 ASALTLMMVPGTPIYDDFIQGKFVIPDQYGCLK--EIGMILEQSNFTDCFFTSNHA 263


>gi|238785130|ref|ZP_04629124.1| Coproporphyrinogen III oxidase and Fe-S oxidoreductase [Yersinia
          bercovieri ATCC 43970]
 gi|238713945|gb|EEQ05963.1| Coproporphyrinogen III oxidase and Fe-S oxidoreductase [Yersinia
          bercovieri ATCC 43970]
          Length = 124

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 21 VYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
          +Y+H PFC   C +C F  +  + +     +    L E+     
Sbjct: 33 LYLHIPFCATHCTFCGFYQNPLQPES-TARYTDYLLRELSMEAN 75


>gi|300744000|ref|ZP_07073020.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rothia dentocariosa M567]
 gi|300380361|gb|EFJ76924.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rothia dentocariosa M567]
          Length = 505

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 70/214 (32%), Gaps = 16/214 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  +++  +     +  ++ L    +I     G    S     
Sbjct: 171 CNNTCTFC----IVPSLRGKEKD--RRPGDILAEVQALVDDGAIEVTLLGQNVNSYGVEF 224

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   + +L        +          +P+    +  +   +    +  + + +QS  
Sbjct: 225 GDRQAFSKLLRACGDIEGLERVRF--TSPHPAMFTDDVIEAMAETPNVMPVLHMPLQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++ + + +  +   R   P   ++ D+I   P ++   ++  L+       
Sbjct: 283 DKVLKDMRRSYRSKKFLGILEKVRERIPHAVITTDIIVGFPGESEEDFQDTLRVVEQARF 342

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
                +Q +I  GT    M       +  E    
Sbjct: 343 SSAFTFQYSIRPGTPAATMENQIPKDIVQERYER 376


>gi|219847937|ref|YP_002462370.1| Radical SAM domain-containing protein [Chloroflexus aggregans DSM
           9485]
 gi|219542196|gb|ACL23934.1| Radical SAM domain protein [Chloroflexus aggregans DSM 9485]
          Length = 390

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 18/226 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-PRSISSIFFGGGTPSLIEPQ-N 88
           +C +C F     R +  + +   +F   ++ ++   G    +    F G   +LI PQ  
Sbjct: 149 RCHFCTFY----RDRPFRIHTPTTFREHIRQVKAFVGAGLGLRMAIFLGDANALIIPQPR 204

Query: 89  IALILDGIAKNWTVSSNVEI-TIEANPSSVEVNN-----FQGYRKAGVNRISLGVQSLEE 142
           +  +L  I + + +     +  I +              ++    AGV RI LG++S ++
Sbjct: 205 LRSLLQVIHEEFPIGPTAPLKGIYSFLDIFGAERKTLTDYRELAGAGVRRIYLGLESGDD 264

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQ--RALSYA 198
                L +  + +EAI  +   +     +   L+             +  +    A++  
Sbjct: 265 TVFHQLNKPGSPAEAIEVVQTIKAAGIAVGVILLAGAGGSRFAADHVQHSIDVIAAMNLG 324

Query: 199 V-DHLSLYQLTIEKGT-LFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             D + L  L +   +    ++ +     L +  +   +  L QS+
Sbjct: 325 PDDIVYLSPLIVGPDSPYLDRLRESASQPLDTAEMMAQVQTLKQSL 370


>gi|66576257|gb|AAY51688.1| MiaB-like tRNA modifying enzyme [Chlorobium tepidum TLS]
          Length = 446

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 64/198 (32%), Gaps = 14/198 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEPQNIA 90
           C YC   S        +   + + L   Q +        + + I  G             
Sbjct: 163 CAYC---SIPLARGRSRSVSLSTVLDRAQKIADAGYREIVLTGINIGDYQ------DGDT 213

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFL 148
            +   + +  T+  +        P  ++         +G  +    L +QS  +  LR +
Sbjct: 214 RLSGLLRRLETIDVSRIRISSVEPQLLDDELIDIVAASGKIMPHFHLPLQSGSDTVLRAM 273

Query: 149 GRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            R+++ +     +  A ++     +  D++   P ++   +E   +      V +L ++ 
Sbjct: 274 RRHYDTAFYRERLMKALSLIRGCAIGADVMVGYPGESERDFEEMCRFIEELPVAYLHVFT 333

Query: 207 LTIEKGTLFYKMHKDGDL 224
            +   GT  +    +  L
Sbjct: 334 CSPRPGTKLFAEIAEKKL 351


>gi|77918738|ref|YP_356553.1| putative Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77544821|gb|ABA88383.1| putative Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 425

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 74/190 (38%), Gaps = 13/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C    +       ++  I++   E+ +   L     I  +         I+  
Sbjct: 201 CPYNCTFC----YHPSGTTYRQRSIENIFREIDF---LLSKYDIEHLLIIDELF-AIDEN 252

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            ++   + IAK      +V  +++     ++ N     + AG   IS G++S +   L+ 
Sbjct: 253 RVSEFCEAIAKY-----DVTFSVQLRVDGIDENLLLKLKNAGCTSISYGLESADNSILKS 307

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  + S+   A+ L R I   +    I+   ++TM      ++  + +    ++L  +
Sbjct: 308 MKKGTDISQIEKALSLTRKIGFFIQGYFIFGDIEETMGTVNTTIRWWMKHLEYGINLAMI 367

Query: 208 TIEKGTLFYK 217
            I  G+  Y+
Sbjct: 368 RIFPGSYLYQ 377


>gi|77408648|ref|ZP_00785382.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           COH1]
 gi|77172766|gb|EAO75901.1| radical SAM protein, TIGR01212 family [Streptococcus agalactiae
           COH1]
          Length = 311

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 18/242 (7%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +     +   ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYKEIDFMHRKWPEVNKYLVYFQNFTNT---HAKLEI 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       + I I   P  +         +        + LG+Q+  E +   +
Sbjct: 100 IKERYEQAINEPGVIGINIGTRPDCLPDETIYYLAELSERMHVTLELGLQTTYEATSALI 159

Query: 149 GRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+       +   R + P++     LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYKKTVKRVRELAPKVEIVSHLINGLPGETHDMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLH 265
            L +   T   + + +G L L S+    D  ++          H   I  H   G    H
Sbjct: 220 LLHLMINTRMQRDYHEGRLRLLSQE---DYISIICDQLEIIPKH---IVIHRITGDAPRH 273

Query: 266 NL 267
            L
Sbjct: 274 ML 275


>gi|332981525|ref|YP_004462966.1| 30S ribosomal protein S12P methylthiotransferase [Mahella
           australiensis 50-1 BON]
 gi|332699203|gb|AEE96144.1| SSU ribosomal protein S12P methylthiotransferase [Mahella
           australiensis 50-1 BON]
          Length = 440

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 18/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +   +     +    +  +    +    R +  I       S+    
Sbjct: 156 CDNGCSYC----IIPFLRGP---YRSRPMENIIEECKELVDRGVKEIILIAQDTSVYGRD 208

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +A +L  +     +       +   P  V     +   ++    + I + +Q +
Sbjct: 209 IYGKPRLAELLHELDNINNIEWIR--VLYCYPDYVNDELIEAIVQSRHVCHYIDIPIQHI 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  +GR   +++    I   R   P ++    LI   P +T   ++M       Y 
Sbjct: 267 NDKILAKMGRRSRSNDIKGVIERLRKCIPGIAIRTSLIVGFPGETDRDFQMLRDFVEQYR 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
           +D++ ++  + E+GT+   M + 
Sbjct: 327 LDNVGVFTYSQEEGTIAAAMPEQ 349


>gi|194755317|ref|XP_001959938.1| GF11786 [Drosophila ananassae]
 gi|190621236|gb|EDV36760.1| GF11786 [Drosophila ananassae]
          Length = 557

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 28/258 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++                S  +  +G    S + 
Sbjct: 223 CLNQCTYCK-TKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSL- 280

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I ++  +   +      NP  + + + +   K          + + VQS 
Sbjct: 281 PELLWKLVEVIPEHCMLRVGM-----TNPPYI-LEHLEEVAKVLQHPRVYAFLHVPVQSG 334

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +   +    +   R   P ++   D+I   P +T   +E  +     Y 
Sbjct: 335 SDSVLGEMKREYCRKDFEHVVDFLRERVPGVTIATDIICGFPTETEADFEETMTLCAKYR 394

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-----EI 253
              L + Q     GT   KM +    ++      +     T    S      Y     EI
Sbjct: 395 FPSLFINQFFPRPGTPAAKMERIPANLVKKRTKRLTDLFYTYEPYSGRVGQIYTVLVTEI 454

Query: 254 SNH--SFLGAESLHNLNY 269
           S+    ++G    HN +Y
Sbjct: 455 SHDKLHYVG----HNKSY 468


>gi|88608596|ref|YP_506702.1| tRNA-i(6)A37 modification enzyme MiaB [Neorickettsia sennetsu str.
           Miyayama]
 gi|123763693|sp|Q2GCU4|MIAB_NEOSM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|88600765|gb|ABD46233.1| tRNA-i(6)A37 modification enzyme MiaB [Neorickettsia sennetsu str.
           Miyayama]
          Length = 471

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 64/192 (33%), Gaps = 7/192 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C +C       R      +  + +   +    +     ++      G   +L    
Sbjct: 187 CDKFCAFC--VVPYTRGAEYSRSTEEVYREALSLTTKGVKEITLLGQNVNGYHGTLDSGN 244

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
            +  +   I++   + S   I     +P  +    +  +      +  + L VQS  ++ 
Sbjct: 245 KVLNLGQLISRLGKIPSLKRIRYTTSHPVDMHKELYDAHANESKLMPFVHLPVQSGSDKI 304

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +  ++ +  I+  +N    +  S D I   P ++   ++  L           
Sbjct: 305 LKQMNRKYTTADYLKIINEFQNARSDIAFSSDFIVGFPGESDDDFQQTLALIEQVNYAQC 364

Query: 203 SLYQLTIEKGTL 214
             ++ +   GT 
Sbjct: 365 YSFKYSPRPGTP 376


>gi|218884393|ref|YP_002428775.1| RNA modification enzyme, MiaB family [Desulfurococcus kamchatkensis
           1221n]
 gi|218766009|gb|ACL11408.1| RNA modification enzyme, MiaB family [Desulfurococcus kamchatkensis
           1221n]
          Length = 432

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 78/207 (37%), Gaps = 15/207 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGT 80
            P    C+  C +C    H RR  V     I + +  ++  +R       ++ +  G   
Sbjct: 139 IPIQEGCLSNCSFC-ITKHARRILVSHG--IDAVVKAVERAVRNGAVEIQLTGMDLGTYG 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE---VNNFQGYRKAG--VNRISL 135
             L + + +  ++  +++  +    + I +  NP  +     +      ++      + +
Sbjct: 196 LDLYKTRKLPELVKEVSRRVSGEYMIRIGM-INPEHLRYILDDLIDAINESSKVYRFLHI 254

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +QS   + L  + RN++  E I  ++ A++  P +S   D+I   P +    +   L+ 
Sbjct: 255 PLQSGSNKVLSVMRRNYSVEEYIEIVNEAKSRIPGVSIATDIIVGHPMEDEEDFNETLKV 314

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                 + + L   +I   T    + +
Sbjct: 315 IRELEFERVHLAGYSIRPLTYSASLPQ 341


>gi|118579357|ref|YP_900607.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118502067|gb|ABK98549.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 451

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/248 (11%), Positives = 78/248 (31%), Gaps = 22/248 (8%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC +     S +R     +       + +++ +R   G      IFF     + 
Sbjct: 185 CSHHCVYCTYPLLEGSCLRSRDPVK------VVDDIELLRDKHGT---GYIFFVDSVFND 235

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                + ++ + + +   +     I     P ++     +  +  G     +G  +  + 
Sbjct: 236 DSGIYLGVVDEMLHRKVNIPWTGYI----KPGNLNDEIVERMKSTGFASAEVGSDAACDS 291

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +L  +G++   ++      L            ++  P +T    +  +   LS     + 
Sbjct: 292 TLARMGKDFTFADIRECNDLLTRHGIATCHFFMFGGPGETEETVKEGIANILSLKKCVIF 351

Query: 204 LYQ-LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT----QSITSAHGLHAYEISNHSF 258
           ++  + +   T   K+     ++    ++   +Y +     +         A+    H  
Sbjct: 352 IFMGIRLLPNTPLAKIAVREGVIDSESDMLQPVYYIAPNLDRDWLERTLTEAFAGVRHCL 411

Query: 259 LGAESLHN 266
              + + N
Sbjct: 412 FPPDCMDN 419


>gi|298373294|ref|ZP_06983283.1| putative biotin biosynthesis-related protein [Bacteroidetes oral
           taxon 274 str. F0058]
 gi|298274346|gb|EFI15898.1| putative biotin biosynthesis-related protein [Bacteroidetes oral
           taxon 274 str. F0058]
          Length = 349

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N ++ RY++ +++ I       +      G R+   +  GG  P  I
Sbjct: 62  CKNDCYYCGIRKSNRNIERYRLQEDSIIGCCADGYEL-----GFRTF--VLQGGEDP-AI 113

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  I+  I + +      +  I  +        ++   +AG NR  L  ++  +  
Sbjct: 114 SDDRLEAIVARIRRQFP-----DCAITLSLGEKSKETYRRLFEAGANRYLLRHETYSKAH 168

Query: 145 LRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            R L  +  +    I  I   + I  +    ++   P QT+     ++        + + 
Sbjct: 169 YRELHPSEMSYDNRIECIGALKEIGFQTGTGIMVGSPHQTIDNLIEDILFIRRLQPEMIG 228

Query: 204 LYQLTIEKGTLFYK 217
           +        T F +
Sbjct: 229 IGPFIPHSDTPFAQ 242


>gi|254512588|ref|ZP_05124654.1| MiaB-like tRNA modifying enzyme [Rhodobacteraceae bacterium KLH11]
 gi|221532587|gb|EEE35582.1| MiaB-like tRNA modifying enzyme [Rhodobacteraceae bacterium KLH11]
          Length = 418

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 80/207 (38%), Gaps = 21/207 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +        + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLVDKGYNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEPQNI-ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  ++   IL  + +   +  +   +IE     V+ N  Q        +  + L +Q
Sbjct: 202 AQPKLGDLVMRILKLVPELPRLRISSIDSIE-----VDENLMQAIATEPRLMPHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P ++   +E  L+    
Sbjct: 257 HGDDLILKRMKRRHLRDDAIRFTEEARKLRPDMTFGADIIAGFPTESDAHFENSLKLVTD 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGD 223
             +  L ++  +   GT   ++ +  +
Sbjct: 317 CDLTWLHVFPYSKRAGTPAARIPQQIN 343


>gi|219670007|ref|YP_002460442.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219540267|gb|ACL22006.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 449

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 15/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +   K+ +   +   + ++       G        F        +P 
Sbjct: 168 CPHHCSYCSL-KKIYHNKL-RTRPVDEVIKDI-------GSMPNKYFVFWDDNF-FADPV 217

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L  +A+     +             +       + AG   + LG++S  EQ LR 
Sbjct: 218 YTKALLKELARLNKRWAAQVTAYSCE----DEELLSLAKSAGCLYLFLGLESFSEQGLRD 273

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             +N N   E    ++        +   +++     T+  +E  L+      VD ++   
Sbjct: 274 ANKNFNKIEEYGKVVNKLHRHGISIQAGIVFGFDSDTLDVFETTLKACNKIGVDGVTASI 333

Query: 207 LTIEKGTLFYKMH 219
           LT   GT  Y+ +
Sbjct: 334 LTPFPGTSIYEQY 346


>gi|254489363|ref|ZP_05102566.1| radical SAM domain protein [Roseobacter sp. GAI101]
 gi|214041870|gb|EEB82510.1| radical SAM domain protein [Roseobacter sp. GAI101]
          Length = 466

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 77/229 (33%), Gaps = 16/229 (6%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CPY C + SH    K  +    ++ + E+  +R +  P  +          + +  + + 
Sbjct: 206 CPYACQWCSHSVFGKSYRHRTPENVIAELLEIRDVYQPDQVWYAD---DVFT-MNFRWLD 261

Query: 91  L---ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L+    ++   +       +    +  +  +  ++ G  R+ +G +S  ++ L  
Sbjct: 262 RFADLLEQNNLHYPFEAI------SREDRLTEDVIKTLKRMGCYRVWIGAESGSQRILDA 315

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + R  NA      I L +N   R    ++     +T       +Q   +   D +     
Sbjct: 316 MERRTNAKRMREMITLLQNHGIRAGTFIMVGYEGETFDDIAATVQHLKAALPDDVLSTLS 375

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              KGT ++      D ++   + A       +       L+   I   
Sbjct: 376 YPIKGTPYHDQVA--DRLVMQGDWATTTERDAKIKGRHSRLYYNSIEAW 422


>gi|167759182|ref|ZP_02431309.1| hypothetical protein CLOSCI_01529 [Clostridium scindens ATCC 35704]
 gi|167663300|gb|EDS07430.1| hypothetical protein CLOSCI_01529 [Clostridium scindens ATCC 35704]
          Length = 323

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 13/192 (6%)

Query: 28  CVKKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C +C  +S  H    +    +  +     +   R+     SI +     G      
Sbjct: 62  CSENCKFCAQSSFYHTEAVEYPLMDVKEILDKAIDNARRGVLRYSIVTSGRRLGD----- 116

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
                 I         +   V+I I  +   ++   F   R AGV+R+   +++   +  
Sbjct: 117 ----NEIDQMCRTIRKIKETVDIEICVSFGLLDKEQFIRLRDAGVSRVHNNLET-SRRYF 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H   + +AAI  A++    +    I  L  +T               +  + + 
Sbjct: 172 PRVCTTHTFDDKVAAIRAAQDAGLNVCSGGIMGL-GETEEDRIDMAFTLKELGIKSVPIN 230

Query: 206 QLTIEKGTLFYK 217
            L    GT +  
Sbjct: 231 MLNPIPGTPYEN 242


>gi|126656743|ref|ZP_01727957.1| biotin synthase [Cyanothece sp. CCY0110]
 gi|126621963|gb|EAZ92671.1| biotin synthase [Cyanothece sp. CCY0110]
          Length = 333

 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 15/192 (7%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C K C YC     +R        +  +    ++   Q+            G  P     
Sbjct: 63  YCQKNCDYCA----MRAANPKLNRYRMAAEEILEIADQIAQMDISILFLQAGQDPQ--SD 116

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +  ++  I + +     V + +   P +V    +Q + + G +   L  +    +  R
Sbjct: 117 SVVEEVIPEIKRRYNFP--VLLCMGERPQNV----YQRFAQLGADSYILKFEVSNPELHR 170

Query: 147 FLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +   H      +  +   +     +    I  L  QT+     +++ AL    + +S  
Sbjct: 171 DI--IHTPLERRLQCLRWLQEAGFEVGTGNIVGLRGQTLDHLVEDIRLALEIQPNFVSSS 228

Query: 206 QLTIEKGTLFYK 217
                + T    
Sbjct: 229 PFIPNQDTPLEN 240


>gi|307181219|gb|EFN68916.1| CDK5RAP1-like protein [Camponotus floridanus]
          Length = 533

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 79/259 (30%), Gaps = 38/259 (14%)

Query: 15  GSNSLGVYVHWP--FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------- 64
             +S+G YV      C   C YC            +   I S L E++ +          
Sbjct: 179 DQDSVGAYVSI-MRGCDNMCTYC---IVPFTRGRERSRPIASILDEVRQLSDQGVKEITL 234

Query: 65  ----LTGPRSISSIFFGGGTPSLIE---PQNIALILDGIAKNWTVSS--------NVEIT 109
               +   R +S   F    P+ ++    +    +          S         N EI 
Sbjct: 235 LGQNVNSYRDLSQSEF--VVPTDMQTHLAKGFKTVYKNKKGGLRFSDLLDKVSLINPEIR 292

Query: 110 I---EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
           I     +P            +      +I L  QS     L  + R +     +  ++  
Sbjct: 293 IRFTSPHPKDFPDEVLHLIAERPNICKQIHLPAQSGNSAVLDRMRRGYTREAYLDLVYHI 352

Query: 165 RNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDG 222
           RNI P +  S D I     +T  +++  L        ++  LY  ++ + T  ++ +KD 
Sbjct: 353 RNILPDIYLSSDFIAGFCGETEEEFQDTLSLIDEVKYNNAYLYPYSMREKTTAHRRYKDD 412

Query: 223 DLVLPSENVAVDLYNLTQS 241
                       +  L + 
Sbjct: 413 VESHVKIERMNRMIMLYRK 431


>gi|316936009|ref|YP_004110991.1| Radical SAM domain-containing protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603723|gb|ADU46258.1| Radical SAM domain protein [Rhodopseudomonas palustris DX-1]
          Length = 591

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 20/238 (8%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + I++ +   +   Q      I+   F        + 
Sbjct: 214 CPYQCSFCTIINVQGRKSRYRTPDDIEAMVR--RNWAQGISKYFITDDNFARNK----DW 267

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  I +   +     I ++     +     +  ++AGV R+ +G++++   +L 
Sbjct: 268 EAILDRLIQIRETEDIPLGFMIQVDTLCHKI-PRFIEKAKRAGVTRVFIGLENINPANLL 326

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
              +  N       + LA      ++    I   P  T      ++        +D +  
Sbjct: 327 TANKRQNKITEYRTMLLAWKDHGIITLAGYILGFPADTPESIRADIDIIKRELPIDVMEF 386

Query: 205 YQLTIEKGTL----FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
           + LT   G+      ++     D  L + +V          + S     A      S 
Sbjct: 387 FCLTPLPGSEDHQALWRAGVAMDPDLNTYDVEHVC--TAHPLMSRSEWEAIYREAWSR 442


>gi|282855829|ref|ZP_06265131.1| biotin synthase [Pyramidobacter piscolens W5455]
 gi|282586343|gb|EFB91609.1| biotin synthase [Pyramidobacter piscolens W5455]
          Length = 357

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 59/193 (30%), Gaps = 11/193 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +RR       +  S    +   RQ  G    + +  GG  P    P+
Sbjct: 66  CRNDCYYCG----IRRGNGAVRRYRLSEEEILGCCRQGYGLGFRTFVLQGGEDPQY-PPE 120

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA ++  + + +      +  +  +        ++ + +AG  R  L  ++      R 
Sbjct: 121 RIAPLVAAVRREFP-----DCAVTLSVGECSDEAYRMFFEAGAERYLLRHETACGGHYRM 175

Query: 148 LG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L             +   + +  ++    +   P Q       + Q   +     + +  
Sbjct: 176 LHPLRQRPENRRRCLWTLKRLGYQVGSGFMVGSPGQRPEHLVADFQFLKALQPQMIGIGP 235

Query: 207 LTIEKGTLFYKMH 219
              ++ T F    
Sbjct: 236 FIPQRDTPFGHAP 248


>gi|260890900|ref|ZP_05902163.1| BchE/P-methylase family protein [Leptotrichia hofstadii F0254]
 gi|260859453|gb|EEX73953.1| BchE/P-methylase family protein [Leptotrichia hofstadii F0254]
          Length = 440

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 23/196 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C  KC YC   S  + Y    +      +  ++++             F    P+ +   
Sbjct: 177 CPNKCSYC---SITKMYSGKNQ------IKSIEYVINEIKTNKPKKWIF--LDPNFLGNR 225

Query: 86  --PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +   L  +   WT S+ + I         +    Q  +++G   + +G++S  ++
Sbjct: 226 NYAIQLMEELKKLKIKWTASATINIG-------NDKKILQLMKESGCIGLVIGLESFVQE 278

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + +  +N +E    +   ++    +   L+  +   T+              VD  
Sbjct: 279 NLDGVNKKFNNVTEYKKLVKTIQSYGISVLSTLMIGMETDTVESIRQIPDIIEEIGVDVP 338

Query: 203 SLYQLTIEKGTLFYKM 218
               +T   GT F+  
Sbjct: 339 RYNIITPYPGTPFFNQ 354


>gi|237668852|ref|ZP_04528836.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|237657200|gb|EEP54756.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 456

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 8/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R +  +   I++ +  +  + +     ++           L E  
Sbjct: 174 CNNFCTYCVVPYVRGRERSRKPQDIENEIKGL--VAEGYKEITLLGQNVNSYGKGLEEEI 231

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
             A +L  I +   +       + ++P  + ++  +  R       +I L +QS  +Q L
Sbjct: 232 TFAQLLRRINEIEGLERVRF--MTSHPKDLNMDVIEAIRDCDKLCEQIHLPIQSGSDQIL 289

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R++     +      R   P +  S DLI   P +T   ++  L        D   
Sbjct: 290 KVMNRHYTRDYYLNLAKAIRKEIPDVTFSTDLIVGFPGETEEDFQATLDLVREVKYDAAF 349

Query: 204 LYQLTIEKGTLFYKM 218
            +  +    T   KM
Sbjct: 350 TFIYSRRNHTPADKM 364


>gi|167624448|ref|YP_001674742.1| radical SAM domain-containing protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167354470|gb|ABZ77083.1| Radical SAM domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 644

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 16/171 (9%)

Query: 30  KKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           +KC +CD  S  ++ R+   +       +  ++ + + TG      +         + P+
Sbjct: 376 RKCSFCD-VSLDYIGRFDATEA---DVLVDRIEQLIEETGETGFHFVDE------ALPPK 425

Query: 88  NIALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  +    I +   +S    I  E    +      Q   ++G   +S G++   ++ L+
Sbjct: 426 LLFALAKRLIERKVVISWWGNIRFE---RTFSQARCQLLAESGCIAVSGGLEVASDRLLK 482

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            + +  +            +    +   L+Y  P QT  +    L+     
Sbjct: 483 LMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQM 533


>gi|83589066|ref|YP_429075.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
 gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]
          Length = 656

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 70/249 (28%), Gaps = 40/249 (16%)

Query: 28  CVKKCPYCDFNSHVR---------RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C   C +C   S            R +   E  +++ + E++++ +        ++    
Sbjct: 219 CPFACGFC--LSSTTEGLRYFSLERVRDDLERLLKAGVREIKFVDRTFNAHKKRALA--- 273

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLG 136
                     I   L                 E     ++        +   +  +  +G
Sbjct: 274 ----------IWEFLLSRR------PRARCYFEIAGDRLDEEMLAHLNRVPPDLFQFEIG 317

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIF-PRMSFDLIYALPKQTMTQWEMELQRAL 195
           VQ+++        R  + +   A     R +   R+  DLI  LP +T           +
Sbjct: 318 VQTIDAGVNARCNRRQDWARLAANTRRLREMGSIRLHLDLIAGLPGETYAGVGESFDAVV 377

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM---HKDGDLVLPSENVAVDLYNLTQSITSAHG----L 248
           +     + L  L + KGT             L  P   V        + +   H     L
Sbjct: 378 ALKPHEIQLGFLKLLKGTTLRARADEFGYLFLDRPPYQVLASSAITYEEMLRLHAIEGLL 437

Query: 249 HAYEISNHS 257
             Y  S+ +
Sbjct: 438 KYYGNSHLA 446


>gi|269797930|ref|YP_003311830.1| RNA modification enzyme, MiaB family [Veillonella parvula DSM 2008]
 gi|269094559|gb|ACZ24550.1| RNA modification enzyme, MiaB family [Veillonella parvula DSM 2008]
          Length = 437

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C K C YC    HVR  ++    E  ++      +   + +  L    +   + F  GT 
Sbjct: 154 CNKFCTYC-IVPHVRGREISRPVEAIVKEVTDLGVKGFKEITLLGQNVNSYGLDFKDGT- 211

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   ++D +     +       + ++P  +  +      ++   V  + L +QS
Sbjct: 212 ------DFGTLVDALDGIPGIERIRY--MTSHPQDMSKSMIDALGRSSNIVTHLHLPIQS 263

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R++        +   R     +    D+I   P +T   ++  LQ     
Sbjct: 264 GSNRILKKMNRHYTVEHYKELLSYCREKIKDVVVTTDIIVGFPGETEDDFQATLQLLKDV 323

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             D    +  +   GT    M
Sbjct: 324 RYDMAYTFIYSKRSGTPAATM 344


>gi|283798879|ref|ZP_06348032.1| radical SAM domain protein [Clostridium sp. M62/1]
 gi|291073336|gb|EFE10700.1| radical SAM domain protein [Clostridium sp. M62/1]
          Length = 399

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 67/201 (33%), Gaps = 24/201 (11%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGG---- 79
           +C   C YC     +RR       +       L+  +  R+L       +    GG    
Sbjct: 104 YCRNDCYYCG----IRRSNQEVSRYRLTPDEILSCCEEGRRLG----FRTFVLQGGEDLN 155

Query: 80  ---TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
                 L   + +A +++ I + +      +  +  +    +   ++ + +AG +R  L 
Sbjct: 156 FEGREGLRGDRALAKVVEEIKRRFP-----DCAVTLSVGERDREVYEQWFQAGADRYLLR 210

Query: 137 VQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            ++ +E+  R L     +       +   ++I  +    ++   P QT+     +L    
Sbjct: 211 HETADEEHYRRLHPTELSGQRRKECLRALKDIGFQTGAGMMVGSPGQTVRHLAEDLVFLR 270

Query: 196 SYAVDHLSLYQLTIEKGTLFY 216
               + + +        T F 
Sbjct: 271 ELQPEMVGIGPFLPHHATPFA 291


>gi|163797711|ref|ZP_02191659.1| Radical SAM domain protein [alpha proteobacterium BAL199]
 gi|159177059|gb|EDP61622.1| Radical SAM domain protein [alpha proteobacterium BAL199]
          Length = 577

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 87/240 (36%), Gaps = 25/240 (10%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C +C   +F+    R++        +  T ++      G   + +      +P   
Sbjct: 220 CPFICSFCTIINFHGRAMRHREP-----STIETYLRECYANGGRHILVTDDNFARSP--- 271

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  I+  + +   V  ++ I ++     ++    +  R+AG++R+ +G++S+   +
Sbjct: 272 IWREVTEIMGRLQRELGVKWDISIQVDTLAYRID-GFVEACREAGISRVFIGIESVRPDN 330

Query: 145 LRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMTQWEMELQRA-LSYAVDHL 202
           L+   +  N    +  + +A       +   +I  LP  T  +   +++       VD L
Sbjct: 331 LKAATKGQNKLHLMRDMVMAWRRAGMLIYGAMIVGLPNDTPERVAEDVRIIQEEIPVDIL 390

Query: 203 SLYQLTIEKGTLFYKM-----------HKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           S + LT   G+  +K                D V P  +  +   +  + +        Y
Sbjct: 391 SAFLLTPHPGSADHKKAVADGVEMDDDLNRYDTVHPVVDHPLMSRDQWEELYWDFWKRFY 450


>gi|15617040|ref|NP_240253.1| hypothetical protein BU441 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11387299|sp|P57516|MIAB_BUCAI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|25305427|pir||C84981 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039105|dbj|BAB13139.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGGTPSLIE 85
           C K   YC F                  L E+  + +  +     +         P+   
Sbjct: 156 CNK---YCSFCVVPYTRGNEISRPCDDVLFEISLLAKQGIKEINLLGQNVNAYQGPTF-- 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +    + I     +     I     NP     +  + Y+     V+ + L VQS   
Sbjct: 211 NGKVCYFSELIRLVAEIDGIERIRFTTSNPLEFTDDIIEVYKDTPKLVSFLHLPVQSGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R++   +  + I       P +  S D I   P ++   +E  ++   +   D
Sbjct: 271 KILNLMKRSYTTEDYTSIIKKLTIARPDIQISSDFIVGFPGESEIDFEKTIEFIKNINFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL 224
               +  +   GT    M+ D DL
Sbjct: 331 MSFSFIYSARPGTPASNMNDDLDL 354


>gi|311113252|ref|YP_003984474.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rothia dentocariosa ATCC
           17931]
 gi|310944746|gb|ADP41040.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rothia dentocariosa ATCC
           17931]
          Length = 505

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C +C     V   +  +++  +     +  ++ L    +I     G    S     
Sbjct: 171 CNNTCTFC----IVPSLRGKEKD--RRPGDILAEVQALVDDGAIEVTLLGQNVNSYGVEF 224

Query: 85  EPQN-IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +   + +L        +          +P+    +  +   +    +  + + +QS  
Sbjct: 225 GDRQAFSKLLRACGDIKGLERVRF--TSPHPAMFTDDVIEAMAETPNVMPVLHMPLQSGS 282

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R++ + + +  +   R   P   ++ D+I   P ++   ++  L+       
Sbjct: 283 DKVLKDMRRSYRSKKFLGILEKVRERIPHAVITTDIIVGFPGESEEDFQDTLRVVEQARF 342

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +I  GT    M
Sbjct: 343 SSAFTFQYSIRPGTPAATM 361


>gi|149045301|gb|EDL98387.1| CDK5 regulatory subunit associated protein 1-like 1 (predicted),
           isoform CRA_d [Rattus norvegicus]
          Length = 520

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYK 217
              L + Q     GT   K
Sbjct: 385 FPSLFINQFYPRPGTPAAK 403


>gi|110801678|ref|YP_699717.1| biotin synthase [Clostridium perfringens SM101]
 gi|110682179|gb|ABG85549.1| radical SAM domain protein [Clostridium perfringens SM101]
          Length = 347

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 62/188 (32%), Gaps = 12/188 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +RR       +  S    + + ++       + +  GG      +  
Sbjct: 60  CKRNCMYCG----LRRDNKNLNRYRLSHEEIIDFAKKAVSYGYKTLVLQGGED----DYY 111

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  +     +   + ++I   P       ++  +KAG +R  L +++ + +    
Sbjct: 112 TVERLVPIVKDLKALGVALTLSIGERP----FEEYEALKKAGADRFLLRIETTDRELYEK 167

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L    +    I  +   R +   +    +  LP Q +     ++       VD   +   
Sbjct: 168 LDPGMSHENRIQCLKNLRKLGYEVGSGCLVGLPGQKIESLADDILFFKELDVDMNGIGPF 227

Query: 208 TIEKGTLF 215
              + T  
Sbjct: 228 IPNEDTPL 235


>gi|149045300|gb|EDL98386.1| CDK5 regulatory subunit associated protein 1-like 1 (predicted),
           isoform CRA_c [Rattus norvegicus]
          Length = 578

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYK 217
              L + Q     GT   K
Sbjct: 385 FPSLFINQFYPRPGTPAAK 403


>gi|21617853|ref|NP_653119.1| CDK5 regulatory subunit-associated protein 1-like 1 [Mus musculus]
 gi|81879575|sp|Q91WE6|CDKAL_MOUSE RecName: Full=CDK5 regulatory subunit-associated protein 1-like 1
 gi|16359212|gb|AAH16073.1| CDK5 regulatory subunit associated protein 1-like 1 [Mus musculus]
 gi|56205715|emb|CAI24677.1| CDK5 regulatory subunit associated protein 1-like 1 [Mus musculus]
 gi|56238093|emb|CAI25816.1| CDK5 regulatory subunit associated protein 1-like 1 [Mus musculus]
 gi|56800055|emb|CAI35240.1| CDK5 regulatory subunit associated protein 1-like 1 [Mus musculus]
 gi|56800204|emb|CAI35144.1| CDK5 regulatory subunit associated protein 1-like 1 [Mus musculus]
 gi|148700456|gb|EDL32403.1| CDK5 regulatory subunit associated protein 1-like 1, isoform CRA_c
           [Mus musculus]
          Length = 578

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYK 217
              L + Q     GT   K
Sbjct: 385 FPSLFINQFYPRPGTPAAK 403


>gi|26349829|dbj|BAC38554.1| unnamed protein product [Mus musculus]
 gi|148700457|gb|EDL32404.1| CDK5 regulatory subunit associated protein 1-like 1, isoform CRA_d
           [Mus musculus]
          Length = 520

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  ++      Q         S  +  +G    + + 
Sbjct: 213 CLNACTYCK-TKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDL- 270

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++ I +   +   +      NP  + + + +   K          + + VQS 
Sbjct: 271 PTLLWKLVEVIPEGAMLRLGM-----TNPPYI-LEHLEEMAKILNHPRVYAFLHIPVQSA 324

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   ++  ++    Y 
Sbjct: 325 SDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYK 384

Query: 199 VDHLSLYQLTIEKGTLFYK 217
              L + Q     GT   K
Sbjct: 385 FPSLFINQFYPRPGTPAAK 403


>gi|284044702|ref|YP_003395042.1| RNA modification enzyme, MiaB family [Conexibacter woesei DSM
           14684]
 gi|283948923|gb|ADB51667.1| RNA modification enzyme, MiaB family [Conexibacter woesei DSM
           14684]
          Length = 443

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 77/263 (29%), Gaps = 34/263 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----------FG 77
           C   C YC                +   + +++ M    G   ++ +             
Sbjct: 151 CNMACSYC---IVPSTRGRDVGRPLGVLVADVERMAS-EGVTEVTLLGQNVNAYGRDLHR 206

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
            G PS       A +L  +     +          +P  ++ +  + + +       + L
Sbjct: 207 RGFPS----ATFADLLSAVDAIDGIRRIRY--TSPHPQDMKEDVIRAHAELEALCEHVHL 260

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
            +QS   + L+ + R ++    +  + L R   P ++   D+I   P +T   +   L  
Sbjct: 261 PLQSGSSRVLKAMRRTYSRERYLDRVALLREHVPDVAITTDIIVGFPGETDEDFAQTLSL 320

Query: 194 ALSYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               A D    +  +  + T              V   + +   +    +          
Sbjct: 321 CEEVAYDGAFTFVYSPRRETEAATLPDQVPHEVKVERMDRLVEVIQRRAKERAQRFVGRT 380

Query: 251 YEI-------SNHSFLGAESLHN 266
            E+       ++ + L   S HN
Sbjct: 381 VEVLVEGPSRTDPTRLRGRSRHN 403


>gi|225175914|ref|ZP_03729906.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168502|gb|EEG77304.1| Radical SAM domain protein [Dethiobacter alkaliphilus AHT 1]
          Length = 354

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 11/191 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C + C YC     +R        + +    E+  +     P    ++    G  S  + 
Sbjct: 64  YCERNCTYCG----LRSSHKDLARY-RMEEEEILAVAAAAVPLGYRTVVLQSGEDSYYDA 118

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           Q +A I+        +   + + I  +      + ++ ++ AG +R  L  ++ +     
Sbjct: 119 QTVASIV------HRLKKELGLVITLSLGERNRDEYKLWKDAGADRYLLKHETADADLYA 172

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            L  +        ++   R +  ++    +  LP QT+     +L    +  V+   +  
Sbjct: 173 ALHPDMTWERRRQSLLTLRELGYQVGSGCMVGLPGQTLNALAEDLLFLQALDVEMAGIGP 232

Query: 207 LTIEKGTLFYK 217
                 T   K
Sbjct: 233 FVPNPHTPLAK 243


>gi|251796225|ref|YP_003010956.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2]
 gi|247543851|gb|ACT00870.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2]
          Length = 448

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +S L + + +        + +    GG    +E  
Sbjct: 153 CNNFCTFC---IIPWSRGLSRSRDPKSVLEQAKQLVASGYKEVVLTGIHTGGYGDDMENY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +L  + K   +      +IEA+   ++        ++      + + +Q+ +   L
Sbjct: 210 RLVDLLWDLDKIEGLERIRISSIEAS--QIDDAMIDVLNRSTKMCRHLHIPLQAGDTSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +   E  A +   R   P ++   D+I   P +T   +E   +         + 
Sbjct: 268 KRMRRKYTTDEFAAKLKRIREAMPGVAITTDVIVGFPGETEEMFENGYKFMEEVGFSEMH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSKRTGTPAARMDDQVD 347


>gi|218782584|ref|YP_002433902.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763968|gb|ACL06434.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 460

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 79/220 (35%), Gaps = 15/220 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC    H    K  +    ++   E++ + +  G R I  +         +  +
Sbjct: 206 CPYQCIYC----HRIFGKGFRPRSPENVADEIEALVRRHGVREIEIVDDIFN----LNAE 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I D I     +   +          +     +  +KAGV+   + V++   +  + 
Sbjct: 258 RAEAICDLIISR-GLKIKISFPNAMRADLLNFRLLKKLKKAGVHFSGIAVETGSPRLQKL 316

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +N + ++   +I++A ++        +   P +T  +    +  A    ++  + + +
Sbjct: 317 IKKNLDLTKVNESINMAFDLGITTVGFFMLGFPSETRDELLATVDFACRSRLNFATFFVV 376

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           T  +GT  Y      DL LP  N      ++     + + 
Sbjct: 377 TPFEGTPLY------DLCLPKLNKMGAPEDMDYHRNACNF 410


>gi|89095299|ref|ZP_01168218.1| radical SAM domain protein [Oceanospirillum sp. MED92]
 gi|89080418|gb|EAR59671.1| radical SAM domain protein [Oceanospirillum sp. MED92]
          Length = 299

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 18/242 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C    +    K  +    Q    E++      G  ++  +F   G    +  + + 
Sbjct: 35  KCTFC--EMYTLPQKKFRPKPQQEIEAEIKACAAQLG--AVRRVFLADGDAMALSFKRLK 90

Query: 91  LILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            IL  I  +   V+      +  N ++  V      R+ G+  + +G +S  +Q L  + 
Sbjct: 91  EILLAIKTHLPTVTRVSSYCLPRNLNNKSVEELAELRELGLQLMYVGAESGNDQVLEKII 150

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQL 207
           +       + A+   +    + S  +I  +     +        +   +   D+L+   L
Sbjct: 151 KGETYQSTLDALMKIKQAGMKSSVMIINGMGGSVYSKQHALDSARLVNAAQPDYLATLVL 210

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
              +G   +  +  GD    S+   ++   +  S             N       S H  
Sbjct: 211 FFREGEEHFINNFGGDFKACSQRELIEEMQVLISEL-----------NLERTVFRSDHAS 259

Query: 268 NY 269
           NY
Sbjct: 260 NY 261


>gi|304404975|ref|ZP_07386635.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
 gi|304345854|gb|EFM11688.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
          Length = 615

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 50/179 (27%), Gaps = 7/179 (3%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQSLRFLG 149
           L+                E     +         +    GV R  +GVQS  + +   + 
Sbjct: 256 LEMFQFLIENHRGCVFQFEITADIMRPEVLDYLAEHAPPGVFRFEIGVQSTNDITNEAVK 315

Query: 150 RNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R  N ++    ++  R+        DLI  LP +    +        +   + L L  L 
Sbjct: 316 RRQNFTKLTRTVNKVRDSGKIDQHLDLIAGLPHEDYDTFRKTFNDVFALRPEELQLGFLK 375

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNL 267
           + +GT    M  D +              L   +     +   +          + H L
Sbjct: 376 MLRGTG---MRHDAEKHGYVYMDRAPYEILGNDLLPFSDIVRIKRVEDVLEKYWNAHRL 431


>gi|224135639|ref|XP_002327268.1| predicted protein [Populus trichocarpa]
 gi|222835638|gb|EEE74073.1| predicted protein [Populus trichocarpa]
          Length = 612

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 66/200 (33%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVG--QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R +      ++      T +    +     S  +  +G        
Sbjct: 187 CLGACTYCK-TKHARGHLGSYTVDSLAGRVKTVIDDGVKEIWLSSEDTGAYGRDI----- 240

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
             N+ ++L+ I        +  + I        + + +   +        + + + VQS 
Sbjct: 241 GVNLPILLNAIVAELPSDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSG 300

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  +E    +     +    +++ D+I   P +T   +   +    +Y 
Sbjct: 301 SDAILTAMNREYTVNEFRTVVDTLTELVPGMQIATDIICGFPGETDKDFSQTVNLIKAYK 360

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              + + Q     GT   +M
Sbjct: 361 FAQVHISQFYPRPGTPAARM 380


>gi|206895928|ref|YP_002247164.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Coprothermobacter
           proteolyticus DSM 5265]
 gi|229890499|sp|B5Y8R7|MIAB_COPPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206738545|gb|ACI17623.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 426

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 86/263 (32%), Gaps = 24/263 (9%)

Query: 6   AYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
            +E   +        VYV     C   C YC     V   +   ++  +   + ++ +R 
Sbjct: 121 DFEKYSSANRKEKHSVYVSIMKGCDDFCTYC----IVPFTRGRVQS--RDPESILEEVRV 174

Query: 65  LTGPRSISSIFFGGGTPSL---IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
                ++     G         +   +   +++ +A    V       +  +P++ + ++
Sbjct: 175 CVDNGAVEITLLGQNVNDYGKDLSGWDFVSLVERVATIDGVRRIRF--MSPHPANFKKDD 232

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIY 177
                          L +QS +++ LR + R +   E    +   R   P ++   DLI 
Sbjct: 233 ITRLANLPQVAPYYHLPLQSGDDEILRRMNRKYTTGEFAELVGFIRESVPNVAIGTDLIV 292

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN 237
             P ++   ++   +       D + +   +   GT   +     +       VA   Y+
Sbjct: 293 GFPGESDEHFQNTFKFLEKMQFDVVYMAIYSPRPGTAAARQ----ETSFVPAEVAKARYD 348

Query: 238 LTQSITSAHGLHAYEISNHSFLG 260
               +       +Y I N  ++G
Sbjct: 349 ---ELLRLQEKISYSI-NQRYVG 367


>gi|86749804|ref|YP_486300.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris HaA2]
 gi|86572832|gb|ABD07389.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Rhodopseudomonas palustris HaA2]
          Length = 508

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 78/226 (34%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++          +   + + +L   + +  + F    P++   +
Sbjct: 202 CPHLCSYCGQRGFWTRWRHRDP------VLFAKELARLHREQGVRVVNFADENPTV--SK 253

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +            V   +  +  A+    + N    Y++AG +R  LG+++ ++ +L  
Sbjct: 254 KVWQTFLEALIAEEVDLILVGSTRADDIVRDANILHLYKQAGWDRFLLGLENTDDATLAL 313

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +         AI L R          +    ++T       L++ LSY  D + +   
Sbjct: 314 IRKGAATPTDREAIRLLRRHGILSMATWVVGFVEETDRDHWRGLRQLLSYDPDQIQMLYA 373

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           T  + T ++    +  ++          ++    + +   +  + +
Sbjct: 374 TPHRWTPYFGQAAERRVI----TTDRRHWDYKHQVLANRNMPPWRV 415


>gi|312127212|ref|YP_003992086.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777231|gb|ADQ06717.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 535

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 18/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFAPLEKVFEELDYL----FKKQVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S   ++  E +P+ ++ +       +  +  R+ +G+QS   Q+L
Sbjct: 215 RAIRIIEFCKQK---SQATQVHFEIDPTLLDNDIISAINNSKDDLFRLEIGLQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R  +       +         +   DLI  LP +    ++  L + + Y  D + L
Sbjct: 272 DAIDRFFDIDRIDKNLKKLMENKKAIVHLDLIAGLPYEDFLSFKRSLDKTILYFADEVQL 331

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
             L + KGT        +       P   V  + +   + I  
Sbjct: 332 GFLKMLKGTKIRNEATKYNYEFFKDPPYEVISNSFISFEEIYK 374


>gi|308274461|emb|CBX31060.1| hypothetical protein N47_E45720 [uncultured Desulfobacterium sp.]
          Length = 433

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 8/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +    ++ +  ++ +++      + S    G     + P+
Sbjct: 153 CEAFCTYC---IVPYARGKSRSMPFETVIESIKNIKKAGHREVVLSGIHIGKYGLDLSPK 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
              L       +     +        P+ +         K+ +      + +QS + + L
Sbjct: 210 TSLL-SLLNLLDSLDIIDRIRISSIEPNELVPEIISLAAKSDIICPHFHIPLQSGDNEIL 268

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R + +      I    N  P   +  D++   P +T   ++          V +L 
Sbjct: 269 KKMRRPYTSEFFKDLILNINNHMPDAAIGVDILAGFPGETDEAFQNTYSLINDLPVTYLH 328

Query: 204 LYQLTIEKGTLFYKM 218
           ++  +  K TL   M
Sbjct: 329 VFPFSPRKNTLAANM 343


>gi|289706447|ref|ZP_06502805.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Micrococcus luteus SK58]
 gi|289556942|gb|EFD50275.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Micrococcus luteus SK58]
          Length = 513

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 81/227 (35%), Gaps = 17/227 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 149 LESLEVFPSTLPTKRDSTHSGWVSISVGCNNTCTFC----IVPSLRGKEKD--RRPGEIL 202

Query: 60  QWMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L    ++     G    +      +    A +L    +   +          +P+
Sbjct: 203 AEVQALVDAGAVEVTLLGQNVNTYGVEFGDRGAFAKLLRACGQIEGLERVRF--TSPHPA 260

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    + ++ + +QS  +  L+ + R++ +   +  +   R   P   +
Sbjct: 261 AFTDDVIDAMAETPNVMPQLHMPLQSGSDTVLKAMRRSYRSKRFLGILEKVRERIPHAAI 320

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           + D+I   P +T   ++  ++   +        +Q +I  GT   +M
Sbjct: 321 TTDIIVGFPGETEEDFQDTMRVVEASRFSSAFTFQYSIRPGTPAGEM 367


>gi|255625551|ref|XP_002540639.1| conserved hypothetical protein [Ricinus communis]
 gi|223494514|gb|EEF21744.1| conserved hypothetical protein [Ricinus communis]
          Length = 67

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 333 MGLRLREGISVKDWEMLAG----RNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDS 388
           MGLRL EG+        +G    + +D         +G++      RLR T+ G+  LD+
Sbjct: 1   MGLRLAEGVDPARIAARSGLAWEQAIDPAMLAACLEEGYLAWTPAGRLRATEEGLLRLDA 60

Query: 389 VIANLA 394
           ++  L 
Sbjct: 61  LLPALL 66


>gi|325103664|ref|YP_004273318.1| MiaB-like tRNA modifying enzyme [Pedobacter saltans DSM 12145]
 gi|324972512|gb|ADY51496.1| MiaB-like tRNA modifying enzyme [Pedobacter saltans DSM 12145]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C Y C F +        + + I S + + + + + +G + I       G   +   +   
Sbjct: 152 CDYSCTFCTIPLARGESRSDTIDSIVAQAKEIAK-SGVKEIVLTGVNIGDFGIRNGKRED 210

Query: 91  LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRF 147
              D +     V     I I    P+ +     +   K+   V    + +QS   + L  
Sbjct: 211 KFFDLVKALDEVEGIDRIRISSIEPNLLSTEIIEFVSKSKRFVPHFHIPLQSGSNKILGL 270

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +     +  +   + + P   +  D+I   P +T   +           + +L ++
Sbjct: 271 MRRRYRRELYVDRVREIKRVMPDCCIGVDVIVGFPGETREDFIDTYNFLNDLDISYLHVF 330

Query: 206 QLTIEKGTLFYKM 218
             +  + T   +M
Sbjct: 331 TYSERENTPAAEM 343


>gi|219681792|ref|YP_002468178.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB (YleA) [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|257471494|ref|ZP_05635493.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB (YleA) [Buchnera
           aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|219624635|gb|ACL30790.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB (YleA) [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--LTGPRSISSIFFGGGTPSLIE 85
           C K   YC F                  L E+  + +  +     +         P+   
Sbjct: 156 CNK---YCSFCVVPYTRGNEISRPCDDVLFEISLLAKQGIKEINLLGQNVNAYQGPTF-- 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
              +    + I     +     I     NP     +  + Y+     V+ + L VQS   
Sbjct: 211 NGKVCYFSELIRLVAEIDGIERIRFTTSNPLEFTDDIIEVYKDTPKLVSFLHLPVQSGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R++   +  + I       P +  S D I   P ++   +E  ++   +   D
Sbjct: 271 KILNLMKRSYTTEDYTSIIKKLTIARPDIQISSDFIVGFPGESEIDFEKTIEFIKNINFD 330

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDL 224
               +  +   GT    M+ D DL
Sbjct: 331 MSFSFIYSARPGTPASNMNDDLDL 354


>gi|167753010|ref|ZP_02425137.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216]
 gi|167659324|gb|EDS03454.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216]
          Length = 432

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 79/240 (32%), Gaps = 22/240 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C  KC YC                +++ L E + +        +  +       +   ++
Sbjct: 144 CNWKCGYCA---IPLIRGPHASVPMETLLEEARKLAAGG----VRELIVIAQDTTYYGLD 196

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + +     +     I +  A P++      +   +       + +  Q + +
Sbjct: 197 LYGKRRLAELLEALCRIDGIRWIRLHYAYPTAFPDEVIEVMAREPKICKYLDIPFQHISD 256

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R H  ++A   I   R   P ++    L+   P +T   +E  L+   +   +
Sbjct: 257 DQLAAMHRRHTKAQAYELIDKLRQAIPDLALRTTLLVGYPGETEADFEELLEFVRTVRFE 316

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L ++  + E+GT   +        LP +       +  + + +     + E  N + +G
Sbjct: 317 RLGVFPYSEEEGTYSAR-------NLPDDVPEEVKQSRVERVMALQNEISLEN-NRARIG 368


>gi|78777220|ref|YP_393535.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
           1251]
 gi|78497760|gb|ABB44300.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
           1251]
          Length = 415

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL--IE 85
           C  +C YC     +  Y  G    +      ++ +R+L        I  G    S     
Sbjct: 144 CNFRCSYC-----IIPYVRGDARSMDE-EKILEQIRRLARNGFGEFILTGTNVGSYGQKN 197

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
             +IA ++  I++   V      ++E  P  +     +   +  + R + + +Q    Q 
Sbjct: 198 DSSIASLMKKISQIRGVRRIRVGSVE--PIQINDEFKEILDEPWLERHLHIALQHTSPQI 255

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R +   +      L  +    +  D I   P ++ + W   ++      + HL  
Sbjct: 256 LKLMNRRNVYKQDRELFELLSSKGFAIGTDFITGHPGESSSLWSEAMRNVKELPLTHLHA 315

Query: 205 YQLTIEKGTLFYKM 218
           +  +    T    M
Sbjct: 316 FTYSKRDSTPSATM 329


>gi|293401527|ref|ZP_06645670.1| HAM1 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305165|gb|EFE46411.1| HAM1 protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 752

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 15/180 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC  +S  R  ++   +++   L ++      +  + +  +             
Sbjct: 183 CPYGCSYC-LSSADRCVRMFSIDYVMEILKQIAN----SDVKQVKLLDR------TFNAD 231

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-RKAGVNRI--SLGVQSLEEQS 144
               +      N    + +    E    ++     + + ++A V R    +GVQS   ++
Sbjct: 232 PKRALRIARYINQNCKNQI-FQFEVVAETLSEELLEFFTKEADVTRFRFEIGVQSFHAKT 290

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ +GR  N       I   R     +  DLI  LP + +  +        +     + L
Sbjct: 291 LQSVGRIQNNERLHQVIKRMREAGCILHVDLIAGLPYEDLPTFRQSFNMLFALQASEVQL 350


>gi|229828421|ref|ZP_04454490.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM
           14600]
 gi|229793015|gb|EEP29129.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM
           14600]
          Length = 450

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 77/217 (35%), Gaps = 32/217 (14%)

Query: 28  CVKKCPYC---------------DFNSHVRRYKVGQENFIQSFLTEMQW--MRQLTGPRS 70
           C + C YC               D    VR   +    + +  L  +        +  R 
Sbjct: 153 CNQFCSYCIIPLARGRIRSRSPKDVLKEVR--GLAASGYQEVVLNGIHLSSYGMTSYNRQ 210

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG- 129
           ++S    GG        ++  +++ +A    +      ++E  P  V+    +   +   
Sbjct: 211 VASEEMAGGG-------HLMELVEAVAGVEGIRRIRLGSME--PRLVDRAFAERLARVEK 261

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQ 186
                 L +QS  +++L+ + R +   +   A+ L R  F    ++ D+I   P++T  +
Sbjct: 262 ICPHFHLSLQSGCDETLKRMNRRYTTQDFRQAVALLRENFAHPAITTDVIVGFPQETEEE 321

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +E             + +++ +  +GTL   M    D
Sbjct: 322 FEASRHFLEEIRFYEMHIFKYSRRRGTLADTMPGQLD 358


>gi|166031360|ref|ZP_02234189.1| hypothetical protein DORFOR_01049 [Dorea formicigenerans ATCC
           27755]
 gi|166028765|gb|EDR47522.1| hypothetical protein DORFOR_01049 [Dorea formicigenerans ATCC
           27755]
          Length = 582

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 60/182 (32%), Gaps = 13/182 (7%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     +     +  R+   G+ ++ +GVQS    ++R + R     E    +   +
Sbjct: 264 FHFEVAADLLNDEEIRLIRQMRPGLIQLEIGVQSTNTDTIREIRRTMRLEEVREHVARIK 323

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
                    DLI  LP + +  +        S   D L L  L + KG+   +M ++ +L
Sbjct: 324 EKGNIHQHLDLIAGLPYEDIKSFRKSFDDVYSMRPDQLQLGFLKVLKGSYMQEMQQEYEL 383

Query: 225 VL---PSENV---AVDLYNLTQSITSAHGL-HAYEISNHSFLGAESL---HNLNYWRYGD 274
                P   V       Y+    +     +   Y  S       E+L   +   Y  Y D
Sbjct: 384 RYKDEPPYEVLSTKWLPYSDVIELKGIEEMVEIYYNSGQFTHVVEALVKNYASAYQMYQD 443

Query: 275 YI 276
             
Sbjct: 444 LW 445


>gi|60683077|ref|YP_213221.1| hypothetical protein BF3627 [Bacteroides fragilis NCTC 9343]
 gi|60494511|emb|CAH09308.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 72/229 (31%), Gaps = 14/229 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDRVEGIERYRISSIE--PNLLTDEIIEYVSRSRSFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +      + I   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 QLMRRRYGTELFASKIAKIKEVMPDAFIGVDVIVGTRGETAGYFEKAYEFIHGLDVTQLH 332

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT-QSITSAHGLHAY 251
           ++  +   GT   +  K   +V P E        L      +      Y
Sbjct: 333 VFSYSERPGT---QALKIDHVVTPEEKHQRSQCLLALSDEKTKAFYARY 378


>gi|322421459|ref|YP_004200682.1| cobalamin B12-binding domain-containing protein [Geobacter sp. M18]
 gi|320127846|gb|ADW15406.1| cobalamin B12-binding domain protein [Geobacter sp. M18]
          Length = 474

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 80/250 (32%), Gaps = 45/250 (18%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWM---------RQLTGPRSISSIF 75
           C   C +C   +F    R         + + L E++ +           L   R  S+  
Sbjct: 170 CPHHCNFCYKDNFF---RGGASFYTQRVDAALAEIERLPGRHLYFLDDHLLADRHFSANL 226

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
           F G        + +  +  G A   ++              ++ +  +   +AG+  I +
Sbjct: 227 FDG-------MRGMNRLFQGAATVDSI--------------LDGDLIEKAVQAGLRSIFI 265

Query: 136 GVQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           G +S+   +LR   +  N   +    +    ++   ++   ++ L       +   +  A
Sbjct: 266 GFESINSANLRSSNKRQNLGRDYDRVVRRLDDLGVFINGSFVFGLDSDGPDVFRRTVSWA 325

Query: 195 LSYAVDHLSLYQLTIEKGTLFYK--------MHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +   +   + + LT   GT  +K        +H++ DL    + V        + +   +
Sbjct: 326 VEKGITTATFHVLTPYPGTGIFKSLEHEGRILHRNWDLYDTRQVVYGPKLMTAEELKQGY 385

Query: 247 GLHAYEISNH 256
                E    
Sbjct: 386 DWAYREFYRW 395


>gi|254810643|sp|Q8A7T2|BIOB_BACTN RecName: Full=Biotin synthase
          Length = 741

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   E +      E     +    + ++       G  PS   
Sbjct: 62  CPENCKWCAQSSH---YKTQAEIYDLLPAEECLRQAKYNESQDVNRFSLVTSGRKPS--- 115

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I+ + D        SS   I + A+   +     +    AG+ R    +++      
Sbjct: 116 PKQISQLCDAARLMRKHSS---IQLCASLGLLNEEELRALHTAGITRYHCNLET-APSYF 171

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 172 PTLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 230

Query: 206 QLTIEKGTLFYK 217
            L+   GT    
Sbjct: 231 LLSPIPGTPLEN 242


>gi|219847265|ref|YP_002461698.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroflexus aggregans DSM 9485]
 gi|219541524|gb|ACL23262.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chloroflexus aggregans DSM 9485]
          Length = 567

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 58/198 (29%), Gaps = 26/198 (13%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGP 68
           Y++ P             C   C +C      RRY+    + F+    T       L   
Sbjct: 186 YIYVPLNVRVAVPNFARGCPFTCRFCSQWKFWRRYRSRSPQKFVDEIET-------LVRD 238

Query: 69  RSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYR 126
             +         P++    N         +       V   I    + +  +      +R
Sbjct: 239 HKVGFFILADEEPTI----NRKKFTALCEELVRRKLPVYWGINTRVTDILRDEALLPLWR 294

Query: 127 KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ 186
            AG+  ISLG ++  + +L    +     +   AI L +          I  +  +T   
Sbjct: 295 AAGLVHISLGTEAAAQMNLDRFRKQTTIEQNKRAIELIKKHGMVAEAQFIMGMENETPET 354

Query: 187 WEMELQRALSYAVDHLSL 204
            E   +  L +  D  + 
Sbjct: 355 IEETYRYVLDWKPDMANW 372


>gi|39937565|ref|NP_949841.1| Elongator protein 3/MiaB/NifB [Rhodopseudomonas palustris CGA009]
 gi|39651424|emb|CAE29947.1| Elongator protein 3/MiaB/NifB [Rhodopseudomonas palustris CGA009]
          Length = 594

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 18/215 (8%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + I++ +   +   Q      I+   F        + 
Sbjct: 217 CPYQCSFCTIINVQGRKSRYRTPDDIEAMVR--RNWAQGISKYFITDDNFARNK----DW 270

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  I +   +     I ++     +     +  ++AGV R+ +G++++   +L 
Sbjct: 271 EAILDRLIQIRETEDIPLGFMIQVDTLCHKI-PRFIEKAKRAGVTRVFIGLENINPANLL 329

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
              +  N      A+ LA      ++    I   P  T      ++        +D +  
Sbjct: 330 TANKRQNKITEYRAMLLAWKDHGIITLAGYILGFPADTPASIRADIDIIKRELPIDVMEF 389

Query: 205 YQLTIEKGT----LFYKMHKDGDLVLPSENVAVDL 235
           + LT   G+      ++     D  L + +V    
Sbjct: 390 FCLTPLPGSEDHQTLWRAGVAMDPDLNNYDVEHVC 424


>gi|256830661|ref|YP_003159389.1| MiaB family RNA modification protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579837|gb|ACU90973.1| RNA modification enzyme, MiaB family [Desulfomicrobium baculatum
           DSM 4028]
          Length = 429

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 16/198 (8%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC      +  R         +      ++   +      I+   +G   P   
Sbjct: 141 CSHGCTYCIIPA--TRGRSVSRPPAEVLDEAGRLLEAGIREISLCGINLRHYGRDLP--- 195

Query: 85  EPQNIALILDGIAK--NWTVSSNVEITI-EANPSSVEVNNFQGYRKAGV--NRISLGVQS 139
              +   +L  + +  +   +    + +    P  +         ++ +    + + +QS
Sbjct: 196 GTTDFWDLLAEVDQALSPRWAGRARLRLGSLEPGDLNAKALSTLAQSRLMTPHLHISLQS 255

Query: 140 LEEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
              + LR +GR H    +  A +H  R+I+P      DLI   P +T +  +  L+    
Sbjct: 256 GSPEVLRRMGRGHYGLEQIFAFLHDLRDIWPVFGLGADLIAGFPGETQSHADETLEVVKR 315

Query: 197 YAVDHLSLYQLTIEKGTL 214
             + +  ++  +   GT 
Sbjct: 316 LPLSYAHVFPYSERPGTP 333


>gi|167037606|ref|YP_001665184.1| MiaB-like tRNA modifying protein YliG [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116021|ref|YP_004186180.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389420|ref|ZP_08210987.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter
           ethanolicus JW 200]
 gi|238064962|sp|B0K9N5|RIMO_THEP3 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|166856440|gb|ABY94848.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929112|gb|ADV79797.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325994425|gb|EGD52850.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 436

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 77/243 (31%), Gaps = 26/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     + + +     +    + ++    +    +    +       +     
Sbjct: 154 CSNACSFC----IIPKIRG---RYRSRKMEDILREAEELVKKGAKELILIAQDTTKYGVD 206

Query: 88  -----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                 +  +L  I+K   +       + A P SV     +  +     V  I + +Q  
Sbjct: 207 VYKKFMLPQLLKEISKIDGLKWIR--LLYAYPDSVTEELVEEIKNNEKIVKYIDIPLQHS 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ L+ + RN N  +    I   R+I    +    +   P +T  ++E   Q       
Sbjct: 265 HDEVLKRMNRNTNRQKIEEVISRLRSIPNMVIRTTFMVGFPGETEEEFEDLKQFIKEKRF 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           + + ++  + E+GT  Y M          ++V +        I            N S +
Sbjct: 325 ERVGVFTYSREEGTKSYYMKPQIK-----KSVKIKRQQELMEIQKEISYQH----NLSKV 375

Query: 260 GAE 262
           G +
Sbjct: 376 GKQ 378


>gi|160888147|ref|ZP_02069150.1| hypothetical protein BACUNI_00555 [Bacteroides uniformis ATCC 8492]
 gi|156862282|gb|EDO55713.1| hypothetical protein BACUNI_00555 [Bacteroides uniformis ATCC 8492]
          Length = 352

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 23/200 (11%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N ++ RY++ QE  +       +            +    GG    +
Sbjct: 62  CRNNCYYCGIRKENRNITRYELTQEEILSCCHEGYRL--------GFRTFVLQGGEAPAV 113

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + + +   +  I +++      +  I  +        ++ +  AG NR  L  ++  E  
Sbjct: 114 KDEGMVEAVAAIRQSFP-----DCAITLSLGEKSREAYERFFLAGANRYLLRHETCNEGH 168

Query: 145 LRFLGRNHNASEAI----AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
                R H A  ++      +   + I  ++   ++   P QT+     ++     +  +
Sbjct: 169 Y---HRLHPAEMSLSHRLQCLDWLKEIGYQVGTGIMVGSPYQTVDHLVEDILFIERFQPE 225

Query: 201 HLSLYQLTIEKGTLFYKMHK 220
            + +        T F     
Sbjct: 226 MIGMGPFLPHHDTPFSSFPP 245


>gi|152993771|ref|YP_001359492.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
 gi|238066610|sp|A6QCC6|RIMO_SULNB RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|151425632|dbj|BAF73135.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 31/211 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C   S   +        + S   E++ + +            G    S I   
Sbjct: 149 CNQACSFCAIPSFKGKLHSRS---LSSIEKEVRMLAEQ-----------GYYDFSFISQD 194

Query: 88  --NIALILDGIAKNWTVSSNVEITIEAN--------PSSVEVNNFQGYRKAGV--NRISL 135
             +    +D       +   VE              PS+           + +      +
Sbjct: 195 SSSYGRDMDLKDGLIDLIKVVEAIEGVRSARILYLYPSTTTFELIDTIADSKIFQTYYDM 254

Query: 136 GVQSLEEQSLRFLGR---NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
            +Q +++  L+ + R        E +  +    N F R S   I   P ++   +E    
Sbjct: 255 PIQHIDDAVLKTMKRGFGEQKTIELLEHMKSKPNAFLRTSV--IAGHPGESQRSFEKLCS 312

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               +  D  + +  + E+ T  Y+M +   
Sbjct: 313 FMEEFGFDRFNTFHYSNEETTTAYQMEQIPQ 343


>gi|323701900|ref|ZP_08113570.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533204|gb|EGB23073.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans
           DSM 574]
          Length = 445

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 71/235 (30%), Gaps = 29/235 (12%)

Query: 28  CVKKCPYCD-------FNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +C YC        F S      V +    + +   E+  + Q           +G  
Sbjct: 157 CDNRCAYCAIPNIRGRFRSRPLESIVAEAKTLVANGTREIILIAQ--DTTRYGQDIYGQY 214

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           +        +  +L  +     +       +   P+       +   +       I L V
Sbjct: 215 S--------LDKLLWLLQDIPDLKWIR--ILYCYPNRFTDGLIKAIAQLPKVCKYIDLPV 264

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q    + LR +GR  N  +  + I   R   P +      I   P +T  Q++  L    
Sbjct: 265 QHANNEILRAMGRPGNQQQVRSLIDRLRREIPGLVLRTSFIVGFPGETEEQFQELLNFMQ 324

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               D   ++  + E+GT   ++          E +  + Y+   ++     L  
Sbjct: 325 QVKFDRAGVFTYSQEEGTPAAELPNQI-----PEEIKQERYHRAMTLQREISLAQ 374


>gi|162449004|ref|YP_001611371.1| hypothetical protein sce0734 [Sorangium cellulosum 'So ce 56']
 gi|161159586|emb|CAN90891.1| hypothetical protein sce0734 [Sorangium cellulosum 'So ce 56']
          Length = 568

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 75/241 (31%), Gaps = 17/241 (7%)

Query: 28  CVKKCPYCDFN-SHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC FN S V  Y    +   ++S    +  +  +     +  + F      + +
Sbjct: 225 CPFPCSYC-FNPSLVEHYGSSWKKVRVRSPENVVAELAHVMKQGPLQFVGFRESIF-VYD 282

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + +    +   +   +     +        +          +G   +++G+++   +  
Sbjct: 283 AEWLRQFGELYRREVKLPYYCHL----RADMMTEEMVDLLAWSGCYTVNVGIETANPELA 338

Query: 146 RFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R        +  I L +     +  D I  +P  T+      L+  +   VD+ + 
Sbjct: 339 NGVLRRQIRMDRLVHGIRLLKRAGIVVFADNILGIPGGTLEDDLATLELNIELDVDYAAA 398

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
              T   GT     +         +   +D    T+S+           S+      E+L
Sbjct: 399 TLCTPYPGTGIA-AYAVEHGHFSGDFDLIDDSYYTESVLRFS-------SDEEKRQIENL 450

Query: 265 H 265
           H
Sbjct: 451 H 451


>gi|149372096|ref|ZP_01891366.1| possible 2-methylthioadenine synthetase [unidentified eubacterium
           SCB49]
 gi|149354863|gb|EDM43425.1| possible 2-methylthioadenine synthetase [unidentified eubacterium
           SCB49]
          Length = 449

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG----GGTPS 82
           C  KC YC   +      + + + +++ L    +   Q      ++ +  G    G   +
Sbjct: 159 CDYKCTYC---TIPLARGISRSDALENVLKNASEIAAQNIKEIVLTGVNIGDYGKGEFGN 215

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                    +   + +   +      +IE  P+ ++          K  V    + +QS 
Sbjct: 216 KKHEHTFFELCQALDEVAGIERLRISSIE--PNLLKNETIDFVAQSKTFVPHFHIPLQSG 273

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +     +  +   + + P   +  D+I   P +T   +        +  
Sbjct: 274 SNTLLKLMKRRYMRELYVDRVSQIKQVMPNACIGVDVIVGFPGETDELFLETYNFLTTLD 333

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           + +L ++  +  + T    M
Sbjct: 334 ISYLHVFTYSERENTEAATM 353


>gi|288553268|ref|YP_003425203.1| biotin synthase [Bacillus pseudofirmus OF4]
 gi|288544428|gb|ADC48311.1| biotin synthase [Bacillus pseudofirmus OF4]
          Length = 329

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 9/188 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC   S +    V + +F+            +        I   G  P+  E  
Sbjct: 65  CPENCGYCSQ-SIISTAPVEKYSFLDKETLLAGAREAMERKAGTYCIVASGRGPTERELD 123

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +   ++ I     +     + I      +     +  ++AGV+R +  + +  +     
Sbjct: 124 GVIEAVEEITATMPLKICACLGI------LTDEKAKRLKQAGVHRYNHNINTHRDHH-EA 176

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +  +H     +  +  A++        +I  +  +T  Q             D + +  L
Sbjct: 177 ITTSHTYDNRVETVESAKSAGMSPCSGVIIGM-GETDEQIVEMAYALREIDADSIPVNFL 235

Query: 208 TIEKGTLF 215
               GT  
Sbjct: 236 HAVPGTPL 243


>gi|238019231|ref|ZP_04599657.1| hypothetical protein VEIDISOL_01095 [Veillonella dispar ATCC 17748]
 gi|237863930|gb|EEP65220.1| hypothetical protein VEIDISOL_01095 [Veillonella dispar ATCC 17748]
          Length = 612

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLI 84
           C   C YC   N +  R+   Q+  ++     +    +      R+ +            
Sbjct: 190 CPFSCQYCLSGNKNTVRF-FPQDRTLKELQWFIDHKVKQVKFVDRTFNCA---------- 238

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
            P +   +++ +       +     +E  P  +         +    RI +  GVQS  +
Sbjct: 239 -PHHHRPLMEFMR---DADTETNFHLEMEPELMTEWETNILCETPPGRIQIEVGVQSTHK 294

Query: 143 QSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R ++      AI  +       +  DLI  LP +   ++ +      S     
Sbjct: 295 KTLDAINRYNDWPYIQKAIRPIIEAGRTHVHMDLIVGLPYENKARFGLSFNDLFSLQPHA 354

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLP 227
           L +  L + KG+   +M +   +  P
Sbjct: 355 LQIGFLKLLKGSGVRRMEEYQYISDP 380


>gi|257066891|ref|YP_003153147.1| hypothetical protein Apre_1403 [Anaerococcus prevotii DSM 20548]
 gi|256798771|gb|ACV29426.1| conserved hypothetical protein [Anaerococcus prevotii DSM 20548]
          Length = 309

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 76/196 (38%), Gaps = 7/196 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC  +S    +   ++  I   ++  + +    G       +F   T +     ++A 
Sbjct: 46  CIYCS-DSGSGEWTFREKGSISRQISYQKKLLAKPGRDEAYIAYFQNFTNTY---GDVAK 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           + +   +  +    V + I      +     +   +   N    + LG+QS+ E+++  +
Sbjct: 102 MREMFYEVISQDDIVGLFIATRADCLSDEVLELLDELKANTFLVVELGMQSVNEKTISLI 161

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +   E    +   +N+   +   +I  LP + M  +  ++    S  +  + ++ L 
Sbjct: 162 NRGYRHEEFDKGLLKLKNLGINILVHIIVGLPYEVMGDYLADISYINSRKIWGVKIHNLY 221

Query: 209 IEKGTLFYKMHKDGDL 224
           IEKGT     ++  ++
Sbjct: 222 IEKGTRLLDFYEKENI 237


>gi|225848368|ref|YP_002728531.1| biotin synthase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643317|gb|ACN98367.1| biotin synthase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 335

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 77/241 (31%), Gaps = 26/241 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C  ++H   +K     +        L   +    +   R    +         
Sbjct: 65  CTEDCSFCAQSAH---FKTPINAYSLVSKDQMLEGAEKAVMINANRYCIVVSGRRA---- 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I + + +   ++    + +  +  +V+  + +  ++AGV+RI+  +++  E 
Sbjct: 118 -SKEEVQKIAEAVKE---INKTYPVKVCCSLGTVDEEDLRLLKEAGVDRINHNLEA-SEN 172

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + +   H   E    I   + +        I+ +  ++               VD + 
Sbjct: 173 FFKNIVTTHTWKERYETIKKVQKVGLSTCSGGIFGM-GESDEDIVDLAMTYRDLNVDSIP 231

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI---------TSAHGLHAYEIS 254
           L  L    GT     H    L          L+N    I            +   A+E++
Sbjct: 232 LNFLMPIPGTPLGNAHNLTPLKCLKIVALFRLFNPNAEIRLCGGREANLKEYHDIAFEVA 291

Query: 255 N 255
           N
Sbjct: 292 N 292


>gi|188996614|ref|YP_001930865.1| MiaB-like tRNA modifying enzyme YliG [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|238066611|sp|B2V8N8|RIMO_SULSY RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|188931681|gb|ACD66311.1| MiaB-like tRNA modifying enzyme YliG [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 430

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +++      I++ + E +++  L     +  +       S     
Sbjct: 141 CDHTCSFCAIPNIRGKHRSKP---IEALVEEAKYLANLG----VKELNIVSQDTSYYGYD 193

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
                 + + +     +     I +    PS+V+ + F+  +  +  ++ I + +Q  E+
Sbjct: 194 LYGKPMLFELLQHLEKIDGIKWIRLYYLYPSTVDEDFFKFIKGSEKILHYIEMPIQHSED 253

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   +    +       P M+    +I   P +T   +E           D
Sbjct: 254 KILKDMMRGYRKKKLYQILEWKEKYTPDMTIRSSVIVGYPTETEEDFENMKNFIQEAQFD 313

Query: 201 HLSLYQLTIEKGTLFYKMH 219
            L ++  + E+GT  Y+ H
Sbjct: 314 WLGVFVYSHEEGTPAYQKH 332


>gi|281357828|ref|ZP_06244314.1| RNA modification enzyme, MiaB family [Victivallis vadensis ATCC
           BAA-548]
 gi|281315775|gb|EFA99802.1| RNA modification enzyme, MiaB family [Victivallis vadensis ATCC
           BAA-548]
          Length = 446

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 65/199 (32%), Gaps = 22/199 (11%)

Query: 28  CVKKCPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C + C YC           + R         +  +        L G    +    G   P
Sbjct: 158 CNRFCSYCIVPYVRG--REISRDPGDVVREARELVAAGARELMLLGQNVAAYGLGGNTNP 215

Query: 82  SLIEPQN----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
               P++     A +L+ + +   +           P+           K+    + I L
Sbjct: 216 ----PEDGSSPFAELLEELDRIPELLRIRF--TSPYPTYFNGRLIDAIAKSRTVCHNIHL 269

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L+ + R +     +  ++  R   P +  S D+I   P +T   ++   + 
Sbjct: 270 PLQSGSDRMLKAMNRQYTHDSYLEVVNRIRAAMPDVTFSTDVIVGFPGETDGDFKQTREV 329

Query: 194 ALSYAVDHLSLYQLTIEKG 212
             +   D+  +++ +   G
Sbjct: 330 MNTVGFDNSFIFKYSPRPG 348


>gi|124002076|ref|ZP_01686930.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Microscilla marina ATCC
           23134]
 gi|123992542|gb|EAY31887.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Microscilla marina ATCC
           23134]
          Length = 493

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 6/147 (4%)

Query: 102 VSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNAS--- 155
           VS ++ I     +P  +  +      K       I L VQS   + L  + R +      
Sbjct: 279 VSPDLRIRFSTSHPKDITEDVLHTMAKYENICKYIHLPVQSGNSRVLDAMNRGYTRERYL 338

Query: 156 EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           E +A+I         +S D+I     +T  + +  L        D   ++  +    T  
Sbjct: 339 EIVASIRRILGEECGISSDMIAGFCTETDEEHQDTLTLMKEVKYDFSYMFYYSERPNTTA 398

Query: 216 YKMHKDGDLVLPSENVAVDLYNLTQSI 242
            K  +D   +   +    ++  L Q +
Sbjct: 399 AKKMEDDVPLEVKKKRLQEIIALQQEL 425


>gi|38234029|ref|NP_939796.1| hypothetical protein DIP1448 [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564788|sp|Q6NGR0|MIAB_CORDI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|38200291|emb|CAE49976.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 516

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 22/201 (10%)

Query: 28  CVKKCPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C +C           V R        +Q+ + +      L G     ++   G   
Sbjct: 170 CNNTCTFCIVPSLRG--KEVDRRPGDILAEVQALVDQGVSEVTLLG----QNVNAYGVNF 223

Query: 82  SLIEPQ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
           S  + Q      + +L    K   +          +P+    +      +      ++ +
Sbjct: 224 SDPDIQRDRFAFSKLLRACGKIEGLERLRF--TSPHPAEFTHDVIDAMAETPNVCPQLHM 281

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +QS  ++ L+ + R++ + + +  +    A+     ++ D+I   P +T   ++  L  
Sbjct: 282 PLQSGSDKVLKEMRRSYRSKKFLGILEEVRAKIPHASITTDIIVGFPGETEEDFQETLNV 341

Query: 194 ALSYAVDHLSLYQLTIEKGTL 214
                      +Q +   GT 
Sbjct: 342 VEKARFTSAYTFQYSPRPGTP 362


>gi|254520106|ref|ZP_05132162.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
 gi|226913855|gb|EEH99056.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
          Length = 561

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 3/117 (2%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAA 160
            +  +   E +   ++ +  +  RKA  +R     GVQ+  +  L  + R  N S+    
Sbjct: 246 DTKTQFHFEISADILKKSELELLRKAPKDRFQFEVGVQTTNDDVLNRINRFVNFSDIKEK 305

Query: 161 IHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           +     I   +   DLI  LP +    ++       S + + + L  L + +G+   
Sbjct: 306 VEELIQIRNIKQHLDLIAGLPGEDYNSFKNSFNDVYSISPEEIQLGFLKLLRGSSMR 362


>gi|262038865|ref|ZP_06012212.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Leptotrichia goodfellowii
           F0264]
 gi|261747116|gb|EEY34608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Leptotrichia goodfellowii
           F0264]
          Length = 441

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C +C     +  Y  G E  +      ++ +   T       +F G    S     
Sbjct: 157 CNNYCTFC-----IVPYVRGMERSVP-LHEVLRDVEFYTKRGYKEILFLGQNVNSYGSDL 210

Query: 87  ----QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNR-ISLGVQSL 140
                N A +L+  AK           +  +P        +       ++R + L +QS 
Sbjct: 211 ADENDNFATLLNESAKIEGDFWIKY--VSPHPKDFNDEVIEAIANNSKISRMLHLPLQSG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +   E I      +   P +    D+I   P +T   ++  +       
Sbjct: 269 STKILNAMNRGYTKEEFIQLAKKIKERIPDIGLTTDIIVGFPGETDKDFQDTMDVVEEIG 328

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            ++  ++  +   GT    M
Sbjct: 329 FENAFMFMYSKRTGTPAATM 348


>gi|120609569|ref|YP_969247.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acidovorax
           citrulli AAC00-1]
 gi|229890406|sp|A1TKI5|MIAB_ACIAC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|120588033|gb|ABM31473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax citrulli
           AAC00-1]
          Length = 449

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 66/203 (32%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-------LTGPRSISSIFFGGGT 80
           C K C YC       R +     F    +       Q       L    +      GG  
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYLGKMGGTA 212

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
               E  + AL+L+ +A    +      T  ++P+         Y +    V+ + L VQ
Sbjct: 213 ----EVADFALLLEYVADITGIERIRFTT--SHPNEFTQRLIDAYARIPKLVSHLHLPVQ 266

Query: 139 SLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
              ++ L  + R + A E  + I    A      MS D I   P +T   +   ++    
Sbjct: 267 HGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFGKMMKLIDD 326

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
              D+   +  +   GT    +H
Sbjct: 327 IHFDNSFSFIFSPRPGTPAASLH 349


>gi|331269008|ref|YP_004395500.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum
           BKT015925]
 gi|329125558|gb|AEB75503.1| putative B12-binding Fe-S oxidoreductase [Clostridium botulinum
           BKT015925]
          Length = 568

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 15/156 (9%)

Query: 103 SSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAA 160
           +++ +   E + + +     Q   K+   R+    GVQ+     L+ + R+ N       
Sbjct: 254 NTDTKFHFEISANILTKGQMQILSKSPKGRLQFEVGVQTTNNNILKNINRHVNFENIQEK 313

Query: 161 IHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT-LFYK 217
           +   + +   +S   DLI  LP + +  +        S   + + L  L + KG+ +  +
Sbjct: 314 VEEVQKLH-NISQHLDLIAGLPGENLESFIKSFNDVYSIKPEEIQLGFLKLLKGSPMLAE 372

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
             K G    P              I S   +  YE+
Sbjct: 373 KDKWGMKYSPYPP---------YEILSTKDISYYEL 399


>gi|300784129|ref|YP_003764420.1| biotin synthetase [Amycolatopsis mediterranei U32]
 gi|299793643|gb|ADJ44018.1| biotin synthetase [Amycolatopsis mediterranei U32]
          Length = 358

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 67/225 (29%), Gaps = 22/225 (9%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F + VR   +   N +++     +   +             G     
Sbjct: 93  CPEDCHFCSQSGRFPTPVRSAWLDIPNLVKAA----RQTAETGATEFCIVAAVRG----- 143

Query: 84  IEPQNIALILDGIAK--NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
             P     +L  + +      +   +I I  +   +           GV+R +  +++  
Sbjct: 144 --PDQ--RLLSQVREGVRAIRADGNDIQIACSLGMLTQEQVDELVDMGVHRYNHNLETAR 199

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
                 +   H   E    + +  +    +    I  +  +T+ Q      +        
Sbjct: 200 SHFPSVVT-THTWEERWDTLRMVADAGMEVCCGGIIGM-GETVEQRAEFAVQLAELNPHE 257

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           + +  L  + GT  Y+ ++  +       VA     + +++    
Sbjct: 258 VPMNFLIPQPGTP-YEHYEIVEGRDALRTVAAFRLAMPRTMLRFA 301


>gi|296134343|ref|YP_003641590.1| cobalamin B12-binding domain protein [Thermincola sp. JR]
 gi|296032921|gb|ADG83689.1| cobalamin B12-binding domain protein [Thermincola potens JR]
          Length = 490

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 68/175 (38%), Gaps = 11/175 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+ +C +C        Y+  +E   ++F+ E++ +R   G   +               +
Sbjct: 204 CINECSFCSQQKF--WYRTYRERKAETFVEELEHLRDCYGVNVVMLSDEYATR----NRE 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
               ILD + +  T    V + +E   + +  + +    YRKAGV  I +GV++  ++ L
Sbjct: 258 RWERILDLMIERQT---GVYLLLETCVADIIRDADILWKYRKAGVLHIYVGVEATNQEKL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +N     +  AI L            +  +P +T    +  L+ A  Y  D
Sbjct: 315 DIFKKNVACENSREAIRLINEAGMITECSFVLGMPDETPESIKSTLKLAKHYNPD 369


>gi|269793254|ref|YP_003318158.1| MiaB-like tRNA modifying enzyme YliG [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100889|gb|ACZ19876.1| MiaB-like tRNA modifying enzyme YliG [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 427

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 69/201 (34%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C  +C YC            +   +   + E + + +               +G    + 
Sbjct: 139 CSNRCAYCA---IPLIRGDLRSLPVAHLVREAELLLEQGAREICLVAQDLTRYGEDLGT- 194

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
               ++  +LD +         + +    +P+ V     +    + V  + + + VQ   
Sbjct: 195 ----DLMELLDQMEATVRGHGVLRLLY-LHPTRVTRELVERVASSDVVASYLDVPVQHAS 249

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  +GR     +A+     AR + P  +    L+   P +    ++  ++       
Sbjct: 250 DRVLASMGRAMGYEDAVRPFLEARQVDPLFAMRTTLMVGYPGEGREDFDALIRFLEEARP 309

Query: 200 DHLSLYQLTIEKGTLFYKMHK 220
           D +  +  + E+GT  +++ +
Sbjct: 310 DRVGAFVFSPEEGTQAFQLPR 330


>gi|198415552|ref|XP_002127642.1| PREDICTED: similar to CDK5 regulatory subunit associated protein 1
           [Ciona intestinalis]
          Length = 618

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 4/138 (2%)

Query: 110 IEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           I  +P        Q    R+    +I L  QS     L  + R H   + +  +   R +
Sbjct: 378 ISPHPKDFPDEVLQIISERENICKQIHLPAQSGSSNVLNLMRRGHTREDYLNLVDRIRTL 437

Query: 168 FPRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +  S D+I     +T +  E  L        ++  L++ +I + T  Y    D    
Sbjct: 438 IPNVVLSTDIISGFCGETDSDHEDTLSLMSLVKYEYAFLFKYSIRQKTHAYHKMNDDVPE 497

Query: 226 LPSENVAVDLYNLTQSIT 243
                   ++  + Q + 
Sbjct: 498 EIKSQRLQEVIKVYQDVL 515


>gi|311747718|ref|ZP_07721503.1| 2-methylthioadenine synthetase [Algoriphagus sp. PR1]
 gi|126575706|gb|EAZ80016.1| 2-methylthioadenine synthetase [Algoriphagus sp. PR1]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 7/193 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C Y C F +        + N I+S L   + +   T  + I       G   +++ +   
Sbjct: 151 CNYGCAFCTIPLARGKSRSNTIESVLESAREIAA-TDVKEIVLTGVNIGDFGIVDGKRNE 209

Query: 91  LILDGIAKNWTVSSNVEITIE-ANPSSVEVNN--FQGYRKAGVNRISLGVQSLEEQSLRF 147
              D +     V       I    P+ +      F    K  V    + +QS     LR 
Sbjct: 210 RFADLVFALDDVEGINRFRISSIEPNLLTNEIISFAAQSKRFVPHFHVPLQSGSNTILRK 269

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +GR +     +  +   +++ P   +  D+I   P +T   +           + +L ++
Sbjct: 270 MGRRYLRELYVDRVSKIKSLMPHACIGVDVIVGFPGETDELFLETYNFLNELDISYLHVF 329

Query: 206 QLTIEKGTLFYKM 218
             +    T   +M
Sbjct: 330 TYSERANTRATEM 342


>gi|313893253|ref|ZP_07826828.1| radical SAM domain protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442149|gb|EFR60566.1| radical SAM domain protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 612

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLI 84
           C   C YC   N +  R+   QE  ++     +    +      R+ +            
Sbjct: 190 CPFSCQYCLSGNKNTVRF-FPQERTLKELQWFIDHKVKQVKFVDRTFNCA---------- 238

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEE 142
            P +   +++ +       +     +E  P  +         +    RI +  GVQS  +
Sbjct: 239 -PHHHRPLMEFMR---DADTETNFHLEMEPELMTEWETTILCETPPGRIQIEVGVQSTHK 294

Query: 143 QSLRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           ++L  + R ++      AI  +       +  DLI  LP +   ++ +      S     
Sbjct: 295 KTLDAINRYNDWPYIQKAIRPIIEAGRTHVHMDLIVGLPYENKARFGLSFNDLFSLQPHA 354

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLP 227
           L +  L + KG+   +M +   +  P
Sbjct: 355 LQIGFLKLLKGSGVRRMEEYQYISDP 380


>gi|265766970|ref|ZP_06094799.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
 gi|263253347|gb|EEZ24823.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDRVEGIERYRISSIE--PNLLTDEIIEYVSRSRSFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +      + I   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 QLMRRRYGTELFASKIAKIKEVMPDAFIGVDVIVGTRGETAGYFEKAYEFIHGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|253566270|ref|ZP_04843724.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945374|gb|EES85812.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301164592|emb|CBW24151.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDRVEGIERYRISSIE--PNLLTDEIIEYVSRSRSFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +      + I   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 QLMRRRYGTELFASKIAKIKEVMPDAFIGVDVIVGTRGETAGYFEKAYEFIHGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|206895616|ref|YP_002247217.1| Fe-S oxidoreductase [Coprothermobacter proteolyticus DSM 5265]
 gi|206738233|gb|ACI17311.1| Fe-S oxidoreductase [Coprothermobacter proteolyticus DSM 5265]
          Length = 388

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 75/214 (35%), Gaps = 27/214 (12%)

Query: 25  WPF--------------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS 70
            PF              C  +C YC   S + R +V +   +   L E++ M +    R 
Sbjct: 110 IPFYPDRSRGFVKVEEGCNWRCTYC--VSSLERGEV-RSRPLGEILQEIRLMSE----RG 162

Query: 71  ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI---EANPSSVEVNNFQGYRK 127
           IS +   G    ++  +     LD I     V++   + +      P  +     + +  
Sbjct: 163 ISEVVLTGTN-LMLWREGEKNYLDLIECVSKVAAEYNMRVRLSSVYPEMINARMIELFCV 221

Query: 128 AGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR-NIFPRMSFDLIYALPKQTMT 185
             + R + + +QS  ++ L+ + R          + L   +     + D+I   P +T+ 
Sbjct: 222 YPLARHLHISLQSASDKVLKSMNRAPLGDLTQMLLQLRNLDSGFAFTADIIVGYPTETVQ 281

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
              M +          + ++  ++  GT   +M 
Sbjct: 282 DSLMTMSFLSDLRFSKVHVFPFSVRPGTPASQMR 315


>gi|53715140|ref|YP_101132.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
 gi|52218005|dbj|BAD50598.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASLVEQARQAAA-EGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDRVEGIERYRISSIE--PNLLTDEIIEYVSRSRSFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +      + I   + + P   +  D+I     +T   +E   +      V  L 
Sbjct: 273 QLMRRRYGTELFASKIAKIKEVMPDVFIGVDVIVGTRGETAGYFEKAYEFIHGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|296132944|ref|YP_003640191.1| MiaB-like tRNA modifying enzyme YliG [Thermincola sp. JR]
 gi|296031522|gb|ADG82290.1| MiaB-like tRNA modifying enzyme YliG [Thermincola potens JR]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 69/208 (33%), Gaps = 14/208 (6%)

Query: 14  QGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSIS 72
           Q +     YV     C  +C YC            +  +       +         R + 
Sbjct: 140 QSTPPYTAYVKIAEGCDNRCSYCA-------IPGIRGGYRSRPKESILQEVNDLVRRGVK 192

Query: 73  SIFFGGGTPSLIEPQNIAL--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG- 129
            +       +           + + I +  ++  +    + A P+ +  +  Q  R    
Sbjct: 193 EVILIAQDTTRYGTDIYGRYALAELIQEIASLPVHWIRILYAYPTRITDDLIQIIRGEPK 252

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               + + +Q +++  ++ + R  +  E +  ++  R   P ++    LI   P +T  Q
Sbjct: 253 VCKYLDMPIQHVDKDIIKAMNRQGDREEIMKLVNRLRKEIPGITLRTTLIVGFPGETEAQ 312

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTL 214
           ++  L+       D L ++  + E+ T 
Sbjct: 313 FQNLLEFVREAKFDRLGVFTYSREESTP 340


>gi|317132913|ref|YP_004092227.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense
           YUAN-3]
 gi|315470892|gb|ADU27496.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense
           YUAN-3]
          Length = 451

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 69/222 (31%), Gaps = 19/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C   C YC     + + +     +    L ++    +    R +  +       +     
Sbjct: 158 CDNHCTYC----IIPKLRG---RYRSRPLDDLVREAEQLAARGVRELTLVAQDTTRYGTD 210

Query: 84  IE--PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQS 139
           +    + +  +L    +   +       +   P +++          +  V  + + +Q 
Sbjct: 211 LSGGKRMLPELLRRFCRIDGLHWVR--LLYCYPEALDDELIDTIASEEKVVPYLDMPIQH 268

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSY 197
           +  + +R + R  + +E  A +   R   P ++    LI   P +T  ++          
Sbjct: 269 VSPRVVRAMNRRMSKAEITALVCKLRARIPDVTLRTTLIVGFPGETEEEFAELAAFVRET 328

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             + L  +  + E+GT   ++    D  +        +    
Sbjct: 329 RFERLGAFAYSQEEGTPAAELPGQIDEDVKKRRQEQIMEEQM 370


>gi|301167860|emb|CBW27445.1| putative radical SAM protein [Bacteriovorax marinus SJ]
          Length = 492

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC            +   +   + +++ + +  G + ++ +  G    S    +
Sbjct: 197 CNKYCTYC---IVPYTRGKERSRKVAEVVEDIRRLVKYQGIQEVTLL--GQNVNSY-GKE 250

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVN-----RISLGVQSLE 141
           N   +   I +   +     I     +P  +           GV+      + L +QS  
Sbjct: 251 NGESLAQLILELENLEGLEIIRYTTSHPYDISDELIMT---HGVSKKLSKHLHLPIQSGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R +     +  ++  R + P   +S D+I     +T  + E  L+       
Sbjct: 308 NTVLKRMNREYTVEHYLDRVNKLREVQPEIIISTDIIAGFVNETNEEHEATLKLLDDARF 367

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           D +  Y  +    T   +M   
Sbjct: 368 DFIYSYAYSKRNKTRAARMEDH 389


>gi|237756406|ref|ZP_04584949.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691441|gb|EEP60506.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 179

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMEL 191
            L +Q+  ++ L+ + R +   E +  I L +   P +  S D+I   P +T   +   +
Sbjct: 1   HLPIQAGSDRILQAMDRGYTQKEYLQKIELLKKYIPNIALSTDIIVGFPGETYEDYLETV 60

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +       D +  ++ +   GT    +  
Sbjct: 61  KVIKEVEYDQVFAFKYSPRPGTPAADLPM 89


>gi|21674219|ref|NP_662284.1| hypothetical protein CT1398 [Chlorobium tepidum TLS]
 gi|81791059|sp|Q8KCL7|RIMO_CHLTE RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|21647384|gb|AAM72626.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 434

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 13/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C +C            +  ++   + ++     L   + +  +       S+    
Sbjct: 149 CNRRCSFCSIPKI-------RGPYVSQPIEQLLREAALLQQQGVKELNLIAQDISVYGYD 201

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + D   +   +  N    + A P +  +      R+     N I + +Q + ++
Sbjct: 202 LYGKSALNDLTLRLSDMGFNWIRLLYAYPLNFPLEVISTMRERPNVCNYIDMPLQHINDR 261

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R          I   R   P +     +I   P +T  ++E  L        D 
Sbjct: 262 ILKSMQRGIGRKATEQLIDDIRQKNPDIRLRTTMIAGYPGETRAEFEELLDFIRQTRFDR 321

Query: 202 LSLYQLTIEKGTLFYKM 218
           L  +    E+    Y +
Sbjct: 322 LGCFPYRHEEHASAYAL 338


>gi|254496551|ref|ZP_05109420.1| hypothetical protein LDG_0201 [Legionella drancourtii LLAP12]
 gi|254354230|gb|EET12896.1| hypothetical protein LDG_0201 [Legionella drancourtii LLAP12]
          Length = 447

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 73/220 (33%), Gaps = 18/220 (8%)

Query: 32  CP-YCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPSLI 84
           C  YC F      R +     F            Q  G R I+ +      + G     +
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPFDDVLAECYHLATQ--GVREINLLGQNVNDYRGK----M 210

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E  +IA +   I     +     I     +P +   N    Y +     N + L VQS  
Sbjct: 211 ENGDIADLALLIHYIAALEGIGRIRFTTSHPLAFSDNLINAYAEVPELANHLHLPVQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R + A E  + I   R + P +  S D+I   P +T   ++  +        
Sbjct: 271 DRILGLMKRGYTALEFKSKIRKLRKVRPDIRLSTDIIVGFPGETDKDFQATMDLVHEIGF 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
           D    +  +   GT    +  +  L +  + + +    L 
Sbjct: 331 DTSFSFIYSPRPGTPAANLVDETPLEVKKQRLQILQSRLL 370


>gi|253565664|ref|ZP_04843119.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764040|ref|ZP_06092608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
 gi|251945943|gb|EES86350.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256648|gb|EEZ27994.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
          Length = 432

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 14/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFGGGTPSLI 84
           C +KC YC       R+       I+  L E++++              + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRH---VSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ I++   V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KKQMLPELIERISEIPGVEWIRLHY--AYPAHFPEELFRVMRERDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R+    E    I   R   P +     L+   P +T   +E   +       D
Sbjct: 259 NMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKVRFD 318

Query: 201 HLSLYQLTIEKGTL 214
            +  +  + E+GT 
Sbjct: 319 RMGAFTYSEEEGTY 332


>gi|228477236|ref|ZP_04061874.1| radical SAM protein [Streptococcus salivarius SK126]
 gi|228251255|gb|EEK10426.1| radical SAM protein [Streptococcus salivarius SK126]
          Length = 314

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYHEIDFMHRKWPEVQKYLVYFQNFTNT---HAPLEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I D   +       V I I   P  +  +      +        + LG+Q+  E++   +
Sbjct: 100 IKDRYEQAINEPGVVGINIGTRPDCLPDDVIDYLAELTERMHVTVELGLQTTYEETSELI 159

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYVETVKRVRERAPKAEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L +   T   + + +G L L S+  
Sbjct: 220 LLHLMTNTRMQRDYHEGRLKLLSQEE 245


>gi|149922352|ref|ZP_01910787.1| oxygen-independent coproporphyrinogen III oxidase family protein,
           putative [Plesiocystis pacifica SIR-1]
 gi|149816802|gb|EDM76291.1| oxygen-independent coproporphyrinogen III oxidase family protein,
           putative [Plesiocystis pacifica SIR-1]
          Length = 533

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 25/252 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C     +         F +++ L E   + +  G R +  +         ++ 
Sbjct: 195 CPYRCEFC-----LSSLDKKVRAFPLEALLGEFDSLLER-GARHLKFVD----RTFNLDI 244

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
                IL+           + +  E  P  +     +   +   G  +  +G+Q+L++  
Sbjct: 245 ARSRAILEHFLARLERYPELFLHFELVPDRLPEELRELIARFPPGSLQFEVGIQTLDDAV 304

Query: 145 LRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            R + R        A +  L       +  DLI  LP + +  +   L R ++  V  + 
Sbjct: 305 GRRISRRQRVDRTFANLEFLRERAHVHLHTDLIIGLPGEDLEGFGAGLDRLIAAGVQEVQ 364

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           +  L   +GT   +  +   LV         L        +   L  +            
Sbjct: 365 VGVLKRLRGTPIVRHAEPFGLVFEPRPPYAILRTDAIDFPTMQRLRRFA-QVW------- 416

Query: 264 LHNLNYWRYGDY 275
               N+W +GD 
Sbjct: 417 ---DNFWNHGDM 425


>gi|78185107|ref|YP_377542.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. CC9902]
 gi|123743500|sp|Q3AV90|MIAB_SYNS9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78169401|gb|ABB26498.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. CC9902]
          Length = 472

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 70/236 (29%), Gaps = 17/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC   S   + +  +   I+  +  +       G + I+ +      +G   P 
Sbjct: 173 CNERCTYCVVPSVRGQEQSRRPEAIRLEMEGLAAQ----GFKEITLLGQNIDAYGRDLPG 228

Query: 83  L-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D +     V     +     +P                      +  Q
Sbjct: 229 ITAEGRREHTLTDLLHHVHDVEGIERLRFATSHPRYFTERLIDACADLSKVCEHFHIPFQ 288

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S +   L+ + R +        I   R+  P   +S D+I   P +T  Q+   L     
Sbjct: 289 SGDNALLKSMARGYTVERYRRIIDRIRDRMPDASISADVIVGFPGETDAQYRRTLDLIDE 348

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A D ++    +    T       D  L    +   +   N      +      Y+
Sbjct: 349 IAFDQVNTAAYSPRPNTPAAT--WDNQLPESVKVERLKEINALVERNARERNIRYQ 402


>gi|57168872|ref|ZP_00368002.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
 gi|305431977|ref|ZP_07401144.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
 gi|57019708|gb|EAL56394.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
 gi|304445061|gb|EFM37707.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
          Length = 418

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   S   + +   E   Q+ L +++ +        + +    G     L   
Sbjct: 143 CDFACSYCIIPSVRGKSRSVDE---QALLRQVEILGANGYSEVVLTGTNIGSYG--LKNG 197

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
             +  +L  + +   +      ++E  P+ ++ +  +   +  + R + + +Q   E+ L
Sbjct: 198 TTLGKLLQKMGQISGIKRIRLGSLE--PAQIDESFLEILDERWMERHLHIALQHTSEKML 255

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R + R  +    +   +   +    +  D I   P +T   W   L+    + + H+  +
Sbjct: 256 RIMRRRSHTDNDLKLFNTIASKGYALGTDFIVGHPGETEELWHEALKHFQEFPLTHIHAF 315

Query: 206 QLTIEKGTLFYKM 218
             +    T    M
Sbjct: 316 IFSPRNNTHSATM 328


>gi|192293358|ref|YP_001993963.1| radical SAM domain protein [Rhodopseudomonas palustris TIE-1]
 gi|192287107|gb|ACF03488.1| Radical SAM domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 591

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 18/215 (8%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + I++ +   +   Q      I+   F        + 
Sbjct: 214 CPYQCSFCTIINVQGRKSRYRTPDDIEAMVR--RNWAQGISKYFITDDNFARNK----DW 267

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  I +   +     I ++     +     +  ++AGV R+ +G++++   +L 
Sbjct: 268 EAILDRLIQIRETEDIPLGFMIQVDTLCHKI-PRFIEKAKRAGVTRVFIGLENINPANLL 326

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
              +  N      A+ LA      ++    I   P  T      ++        +D +  
Sbjct: 327 TANKRQNKITEYRAMLLAWKDHGIITLAGYILGFPADTPASIRADIDIIKRELPIDVMEF 386

Query: 205 YQLTIEKGT----LFYKMHKDGDLVLPSENVAVDL 235
           + LT   G+      ++     D  L + +V    
Sbjct: 387 FCLTPLPGSEDHQTLWRAGVAMDPDLNNYDVEHVC 421


>gi|169333816|ref|ZP_02861009.1| hypothetical protein ANASTE_00202 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259381|gb|EDS73347.1| hypothetical protein ANASTE_00202 [Anaerofustis stercorihominis DSM
           17244]
          Length = 567

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 79/237 (33%), Gaps = 35/237 (14%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C   C YC                +      +++ R L   +     F     P +    
Sbjct: 182 CPYNCSYC----------------LSELDKSLRF-RDLNKVKEEIMFFIDNNIPLVKFID 224

Query: 84  --IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQS 139
                 N     + I      S + +   E   + ++    +    A  +  ++ +G+QS
Sbjct: 225 RTFNADN-KRAKEIIRFILRNSKHTKFHFEVCANLLDDEIIELLGSAPNDMFQLEIGLQS 283

Query: 140 LEEQSLRFLGRNHNASEA-IAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           + E +++ + R  +  +  I  + L +N    +  DLI  LP + +  ++     A +  
Sbjct: 284 INEHTIKEINRTTDTEKIGINVLKLLKNDNVHIHLDLISGLPYEDLNSFKESFNFAYNLK 343

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              L L  L I  GT+  K  KD DL                 I S   L   +ISN
Sbjct: 344 PHMLQLGFLKILHGTMIEKKKKDYDLKYNDFTP--------YEILSNKWLSYEDISN 392


>gi|154484063|ref|ZP_02026511.1| hypothetical protein EUBVEN_01772 [Eubacterium ventriosum ATCC
           27560]
 gi|149735105|gb|EDM50991.1| hypothetical protein EUBVEN_01772 [Eubacterium ventriosum ATCC
           27560]
          Length = 599

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 3/111 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     +             G+ ++ +GVQS  E++L  + R  +  +         
Sbjct: 282 FHFEIAADLMTDEEIALISDMRPGLIQLEIGVQSTNEKTLEAINRKTDIEKIAEITEKIH 341

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLF 215
           +        DLI  LP +    ++    +  +   D   L  L +  G++ 
Sbjct: 342 HGGNIHQHLDLIAGLPYENYESFKRSFDQVYAMKPDQFQLGFLKVLYGSMM 392


>gi|332024358|gb|EGI64557.1| CDKAL1-like protein [Acromyrmex echinatior]
          Length = 539

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 17/201 (8%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++      +         S  +  +G    + + 
Sbjct: 211 CLNQCTYCK-TKHARGELGSYPPEEIVERAKQAFEEGVCELWLTSEDTGAYGRDIGTNL- 268

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  ++D       +     + I        + +     K        + + + VQS 
Sbjct: 269 PKLLWQLIDV------IPDGCMMRIGMTNPPYILEHLDEMTKILRHSKVYSFLHIPVQSG 322

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  +E    ++          ++ D+I   P +T   +E  +     Y 
Sbjct: 323 SDHVLADMKREYTCAEFEHVVNFLSERVPGLTIATDIICGFPTETEMDFEETMTLCQKYK 382

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
              L + Q     GT   +M 
Sbjct: 383 FPSLFINQFFSRPGTPAARMP 403


>gi|282856153|ref|ZP_06265436.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens
           W5455]
 gi|282585912|gb|EFB91197.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens
           W5455]
          Length = 435

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 70/237 (29%), Gaps = 20/237 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSL--- 83
           C   C YC            +  F      E+    +      +  I   G    +    
Sbjct: 156 CDNFCTYC-------IVPYVRGRFASRSPREIMSEAEQLVEGGVKEICLLGQNVDTYGKD 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++  + A +L+ +A    +       + + P+    +              I+L +Q+  
Sbjct: 209 LDRYSFADLLNDVAHIKGLERLRF--MTSYPTDFTKDVVDAIAGNANICPAINLPIQAGS 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R +   E    +   R   P +    DLI   P +T   +   ++    +  
Sbjct: 267 DRILKAMNRRYTVEEYAKVVDCIRCGLPEVGLTSDLIVGFPSETEDDFACSMEALERFRF 326

Query: 200 DHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           D +     +  +GT          +        +V      + + I        Y +
Sbjct: 327 DQVHTAAYSRRQGTPAAAMKDQVPESVKNRRLNDVNRLQTEIAKDINKKLVGRRYRV 383


>gi|300775750|ref|ZP_07085611.1| 2-methylthioadenine synthetase [Chryseobacterium gleum ATCC 35910]
 gi|300505777|gb|EFK36914.1| 2-methylthioadenine synthetase [Chryseobacterium gleum ATCC 35910]
          Length = 448

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 71/200 (35%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG----GGTPS 82
           C  KC YC   +      + + + I++ L    +   +      ++ +  G    G   +
Sbjct: 156 CDYKCTYC---TIPLARGISRSDTIENVLRNATEIAAKDIKEIVLTGVNIGDYGKGEFGN 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                    ++  + K   +      +IE  P+ ++  + +   K+   V    + +QS 
Sbjct: 213 KRHEHTFLDLISELDKVEGIERIRISSIE--PNLLKDESIELVSKSRSFVPHFHIPLQSG 270

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R +        ++  R + P   +  D+I   P +T  ++           
Sbjct: 271 SDDLLKKMKRRYLTKLYNDRVNKIREVMPDAAIGVDVIVGFPGETEERFMETYNFLNELP 330

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           + +L ++  +  + T    M
Sbjct: 331 ITYLHVFTYSERENTEAASM 350


>gi|94969349|ref|YP_591397.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551399|gb|ABF41323.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 523

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 77/198 (38%), Gaps = 17/198 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-----GGTPS 82
           C  +C +CD          G+   +++    ++ +  +    +I +++F      G   +
Sbjct: 188 CPYRCEFCD-----IPELYGRNPRLKTPQQILKELDAIVAGGAIGAVYFVDDNFVGNRKA 242

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLE 141
            +  + +  +++   KN      VE   EA  + V   +     R+A    I +G+++ +
Sbjct: 243 AL--ELLPHLVEWQKKNN---YPVEFACEATLNIVKSPDLLALMREADFWTIFVGIETPD 297

Query: 142 EQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             +L+ + ++HN     + AI    +    +   +I  L   T+   E  L+      + 
Sbjct: 298 PAALKLISKDHNNTVPVLEAIQTLNSFGIEVVSGIIMGLDSDTVETGERILKFVAESQIP 357

Query: 201 HLSLYQLTIEKGTLFYKM 218
            L++  L     T  Y+ 
Sbjct: 358 VLTINLLEALPRTPLYRR 375


>gi|297568782|ref|YP_003690126.1| RNA modification enzyme, MiaB family [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924697|gb|ADH85507.1| RNA modification enzyme, MiaB family [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 452

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 10/193 (5%)

Query: 28  CVKKCPYCDFN----SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C   C YC         V R      N ++           L G    S     G   + 
Sbjct: 161 CNNFCTYCVVPHTRGREVSRKPEDIINEVRHLADHGVREVTLLGQNVNSYGQDRGPAGTT 220

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +  +   +L  +     +      T  ++P  +       + +         L VQS  
Sbjct: 221 GQIDDFPALLQAVVAVEGIYRVRFTT--SHPKDLSPELIDCFAQLNKLCPHFHLPVQSGS 278

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R ++ ++ +A +   R + P ++   DLI   P +T   +E  ++       
Sbjct: 279 DRILARMNRKYSRADYLARVAQLRRVRPDIAITTDLIVGFPGETEADFEATMELVNFVRY 338

Query: 200 DHLSLYQLTIEKG 212
           D    ++ +    
Sbjct: 339 DSAFSFKYSDRPN 351


>gi|253572313|ref|ZP_04849716.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. 1_1_6]
 gi|251838088|gb|EES66176.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides sp. 1_1_6]
          Length = 804

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   E +      E     +    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YKTQAEIYDLLPAEECLRQAKYNESQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I+ + D        SS   I + A+   +     +    AG+ R    +++      
Sbjct: 179 PKQISQLCDAARLMRKHSS---IQLCASLGLLNEEELRALHTAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 PTLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYK 217
            L+   GT    
Sbjct: 294 LLSPIPGTPLEN 305


>gi|255693887|ref|ZP_05417562.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
 gi|260620292|gb|EEX43163.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
          Length = 434

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+     + I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHISKPIDEILDEVRYLVSQGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I+    V         A P+    + F+  R+       + + +Q + ++ L
Sbjct: 204 MLPELIERISDIPGVEWIRLHY--AYPAHFPTDLFRVMRERDNVCKYMDIALQHISDKML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R     +    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 RLMRRQVTKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKVRFDRMG 321

Query: 204 LYQLTIEKGTLFYKMH 219
            +  + E+GT   + +
Sbjct: 322 AFAYSEEEGTYAAEAY 337


>gi|255659203|ref|ZP_05404612.1| tRNA-I(6)A37 modification enzyme MiaB [Mitsuokella multacida DSM
           20544]
 gi|260848655|gb|EEX68662.1| tRNA-I(6)A37 modification enzyme MiaB [Mitsuokella multacida DSM
           20544]
          Length = 430

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 72/243 (29%), Gaps = 25/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF----FGGGTPSL 83
           C   C YC            +    +    E + +  +     + +      +G   P  
Sbjct: 152 CQNFCSYC---IIPYARGPVKSRLPEHVHREAEKLVAMGFKEIVLTGIHLGAYGRDLPGD 208

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLE 141
           I   +    +  +     +      +IE +P       F   R+       + L +Q+  
Sbjct: 209 ITLADACREVLSVPGLKRLRLGSLESIELSP-----ELFALIREDERFCAHLHLPLQAGS 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R+++  E    I           +S D+I   P +T   +E  L        
Sbjct: 264 DKVLKDMNRHYDTQEFARLIEHIEEEVPGVAISTDIIVGFPGETEEDFEQGLSFVEKMNF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
             + ++  +   GT         D                  + +     A E  + SF+
Sbjct: 324 ARMHVFPYSRRTGTPAAARKDQVD--------EAVKKERVHRMQALADRKAEEF-HRSFI 374

Query: 260 GAE 262
           G E
Sbjct: 375 GRE 377


>gi|146304011|ref|YP_001191327.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
           5348]
 gi|145702261|gb|ABP95403.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
          Length = 533

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 80/245 (32%), Gaps = 22/245 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C            +    +  L E+  +++L       +       P++   +
Sbjct: 211 CPYACEFCS--VTPTWGNSWRNKSNERILKELSEIKRLGYSWVFFTDDIFVVQPNI---K 265

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +   + D + +   +S+N    +  + ++      +    AG+    LGV+S ++++L+ 
Sbjct: 266 DRMKLFDQMME-MGLSTNFIAQMRVDITAKNPEVIKKASDAGLRIAFLGVESGDDETLKK 324

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL---SYAVDHLSL 204
           L +    S A  A+ +       +   LI   P  T  +    ++ A        D +  
Sbjct: 325 LHKGTVTSLAEKAVKVLHENGVVVLIGLILGAPYDTFKKMMKTIRFAYRLSDLGADSVQF 384

Query: 205 YQLTIEKGTL-----------FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              T   GT            F       D++LP      +   L       +G + + +
Sbjct: 385 SIYTPLPGTRVFVKALKEKRLFTLNWDYYDILLPVMKTKSNP--LLVQFLQYYGNYTFYV 442

Query: 254 SNHSF 258
                
Sbjct: 443 RKWIR 447


>gi|332877549|ref|ZP_08445296.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684655|gb|EGJ57505.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 447

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G R I       G       +
Sbjct: 168 CDYYCTYC---TIPYARGRSRNGSIASLVRQAEQAAS-EGGREIVLTGVNIGDFGKTTGE 223

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSL 145
           +   ++  + +   ++     +IE  P+ +         +  A +    + +QS  ++ L
Sbjct: 224 SFLDLVKALDRVEGIARYRISSIE--PNLLTEEVLAYCAESRAFMPHFHIPLQSGSDEVL 281

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +     I   + + P   +  D+I     +T   +E   +   S  V  L 
Sbjct: 282 KLMRRRYTTNFFAEKISRVKELMPDAFVGVDVIVGTRGETEECFEEAFEFIRSLDVSQLH 341

Query: 204 LYQLTIEKGTL 214
           ++  +   GT+
Sbjct: 342 VFSYSERPGTM 352


>gi|293402175|ref|ZP_06646313.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304282|gb|EFE45533.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 433

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 70/234 (29%), Gaps = 26/234 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC          + + + +   + ++    +    R +  +       +     
Sbjct: 145 CSNRCTYCA-------IPLIRGDNVTFPMEQLVQEAKELAQRGVKELVLIAQDTTKYGVD 197

Query: 88  NIAL--ILDGIAKNWTVSS-NVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 +L+ + K   +   +    +   P  ++ +  +G  K    +    + +Q    
Sbjct: 198 LYGKRSLLELLQKLHEIDGFHWIRILYMYPDEIDEDLIEGMAKLPKVLPYFDIPMQHANN 257

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R     E +A I   R  +    +    I   P +T   ++  +Q       D
Sbjct: 258 RMLAAMNRRGTKEEVLALIKKIRKTYADPTLRTTFIVGFPSETQEDFDELMQFVEDVHWD 317

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
            +  +  + E+ T  ++M                     Q   +       EIS
Sbjct: 318 RMGAFTYSPEEDTPAFEM------------EQSVAEEEKQRRLAILMQRQEEIS 359


>gi|126464458|ref|YP_001045571.1| radical SAM domain-containing protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106269|gb|ABN78799.1| Radical SAM domain protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 669

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 63/335 (18%), Positives = 111/335 (33%), Gaps = 48/335 (14%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C YC         K            E+ W+  L     + ++F       + +     +
Sbjct: 213 CAYC---QWGNGDKSRFAFAADRVRDEITWLLSLD----VQTVFIVDAMFGIKKSAAKEI 265

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           +   +A+   + +     +  N    +   F  YR AGV  I + +QS     L  LGR 
Sbjct: 266 LRHIVAEKQRLGARTTFNLYHNQDFYDPELFDLYRAAGV-HIEIDLQSTNSAVLDKLGRG 324

Query: 152 HNASEAIAAIHLARNIFPRMSF------DLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
                         +   R         DLI  +P   +  +   +   L   +  ++LY
Sbjct: 325 ---RWTTEVFERQLSAVQRHGVPTTGAADLIIGVPGDDLASFAASVDYLLRKRM-RVNLY 380

Query: 206 QLTIEKGTLFYKMHKDGDLV----LPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGA 261
           Q +I   T++ ++     +V     P   +    + L   + +    H  ++ N     A
Sbjct: 381 QASILPDTVWGRLPPADGVVSAPLPPRAILQTARFPLADMLAARLIGHGTDVFNSFPRTA 440

Query: 262 ESLHNLNYWRY------GDYIGIG----PGAHSRVKVGSHRVAISIEKHPESWLKMVRKN 311
           E L     WR            IG     G H  +   SH+ A S+     +WL ++   
Sbjct: 441 EFL-----WRGWFDSPVELCRAIGDRVYAG-HGLMYGESHQYAPSM----AAWLDLLPDL 490

Query: 312 GHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDW 346
             A      L  + +A E L+  LRL   ++   W
Sbjct: 491 IRA------LCPDARAAEILVDLLRLEGALAAARW 519


>gi|323718661|gb|EGB27824.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Mycobacterium tuberculosis CDC1551A]
          Length = 518

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 186 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 239

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 240 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 297

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 298 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 357

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 358 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 413

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 414 AVVQERYERLI 424


>gi|308380459|ref|ZP_07490004.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu011]
 gi|308361421|gb|EFP50272.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu011]
          Length = 500

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 153 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 206

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 264

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 265 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 324

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 325 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 380

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 381 AVVQERYERLI 391


>gi|308373494|ref|ZP_07667593.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu005]
 gi|308375495|ref|ZP_07668037.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu007]
 gi|308337478|gb|EFP26329.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu005]
 gi|308346063|gb|EFP34914.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu007]
          Length = 515

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 156 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 209

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 210 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 267

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 268 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 327

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 328 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 383

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 384 AVVQERYERLI 394


>gi|308372381|ref|ZP_07428457.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu004]
 gi|308333412|gb|EFP22263.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu004]
          Length = 498

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 186 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 239

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 240 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 297

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 298 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 357

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 358 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 413

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 414 AVVQERYERLI 424


>gi|308371116|ref|ZP_07423861.2| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu003]
 gi|308329792|gb|EFP18643.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu003]
          Length = 500

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 186 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 239

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 240 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 297

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 298 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 357

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 358 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 413

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 414 AVVQERYERLI 424


>gi|307085426|ref|ZP_07494539.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu012]
 gi|308365073|gb|EFP53924.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu012]
          Length = 563

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 204 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 257

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 258 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 315

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 316 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 375

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 376 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 431

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 432 AVVQERYERLI 442


>gi|254551787|ref|ZP_05142234.1| hypothetical alanine, arginine-rich protein [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
          Length = 512

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 153 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 206

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 264

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 265 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 324

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 325 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 380

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 381 AVVQERYERLI 391


>gi|253798186|ref|YP_003031187.1| hypothetical protein TBMG_01242 [Mycobacterium tuberculosis KZN
           1435]
 gi|289553483|ref|ZP_06442693.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis KZN 605]
 gi|289746535|ref|ZP_06505913.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|298526202|ref|ZP_07013611.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308378082|ref|ZP_07481451.2| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu009]
 gi|253319689|gb|ACT24292.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis KZN 1435]
 gi|289438115|gb|EFD20608.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis KZN 605]
 gi|289687063|gb|EFD54551.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|298495996|gb|EFI31290.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308353677|gb|EFP42528.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu009]
 gi|328457959|gb|AEB03382.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis KZN 4207]
          Length = 545

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 186 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 239

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 240 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 297

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 298 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 357

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 358 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 413

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 414 AVVQERYERLI 424


>gi|212692499|ref|ZP_03300627.1| hypothetical protein BACDOR_01995 [Bacteroides dorei DSM 17855]
 gi|212664974|gb|EEB25546.1| hypothetical protein BACDOR_01995 [Bacteroides dorei DSM 17855]
          Length = 456

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 62/198 (31%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E       + +  +R L           G    S    +
Sbjct: 172 CNNFCHYC-----IVPYTRGRERSRD-VESILNEVRDLAAKGYKEVTLLGQNVNSY-RFE 224

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               I+       TV+  V         ++P  +     Q   +       I L VQS  
Sbjct: 225 KEGEIITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQVIVETPNVCKHIHLPVQSGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R I P   +S D+      +T    +  L      A 
Sbjct: 285 SRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYHSETEEDHQESLSLMRECAY 344

Query: 200 DHLSLYQLTIEKGTLFYK 217
           D   +++ +   GT   K
Sbjct: 345 DSAFMFKYSERPGTYASK 362


>gi|160885195|ref|ZP_02066198.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483]
 gi|156109545|gb|EDO11290.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483]
          Length = 439

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQTRQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVDGIERYRISSIE--PNLLTDEIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVKKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|29346852|ref|NP_810355.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides thetaiotaomicron VPI-5482]
 gi|29338749|gb|AAO76549.1| adenosylmethionine-8-amino-7-oxononanoate aminotransferase
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 804

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   E +      E     +    + ++       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YKTQAEIYDLLPAEECLRQAKYNESQDVNRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I+ + D        SS   I + A+   +     +    AG+ R    +++      
Sbjct: 179 PKQISQLCDAARLMRKHSS---IQLCASLGLLNEEELRALHTAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 PTLCSTHTQEQKLATLDAARRVGMDICCGGIIGM-GETMEQRIEFAFTLAELNVQSIPIN 293

Query: 206 QLTIEKGTLFYK 217
            L+   GT    
Sbjct: 294 LLSPIPGTPLEN 305


>gi|15842271|ref|NP_337308.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis CDC1551]
 gi|13882563|gb|AAK47122.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
          Length = 512

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 153 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 206

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 264

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 265 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 324

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 325 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 380

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 381 AVVQERYERLI 391


>gi|15609870|ref|NP_217249.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis H37Rv]
 gi|31793905|ref|NP_856398.1| hypothetical protein Mb2752c [Mycobacterium bovis AF2122/97]
 gi|121638608|ref|YP_978832.1| hypothetical protein BCG_2746c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662574|ref|YP_001284097.1| hypothetical protein MRA_2759 [Mycobacterium tuberculosis H37Ra]
 gi|148823921|ref|YP_001288675.1| hypothetical protein TBFG_12746 [Mycobacterium tuberculosis F11]
 gi|167967441|ref|ZP_02549718.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis H37Ra]
 gi|215404696|ref|ZP_03416877.1| hypothetical protein Mtub0_13618 [Mycobacterium tuberculosis
           02_1987]
 gi|215412537|ref|ZP_03421271.1| hypothetical protein Mtub9_14345 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215431668|ref|ZP_03429587.1| hypothetical protein MtubE_13568 [Mycobacterium tuberculosis
           EAS054]
 gi|218754467|ref|ZP_03533263.1| hypothetical protein MtubG1_14004 [Mycobacterium tuberculosis GM
           1503]
 gi|219558738|ref|ZP_03537814.1| hypothetical protein MtubT1_16097 [Mycobacterium tuberculosis T17]
 gi|224991100|ref|YP_002645789.1| hypothetical alanine, arginine-rich protein [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|254232832|ref|ZP_04926159.1| conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium tuberculosis C]
 gi|254365387|ref|ZP_04981432.1| conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium tuberculosis str. Haarlem]
 gi|260187748|ref|ZP_05765222.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201856|ref|ZP_05769347.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis T46]
 gi|289444275|ref|ZP_06434019.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis T46]
 gi|289448388|ref|ZP_06438132.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis CPHL_A]
 gi|289570909|ref|ZP_06451136.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis T17]
 gi|289754836|ref|ZP_06514214.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289762904|ref|ZP_06522282.1| conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium tuberculosis GM 1503]
 gi|294994178|ref|ZP_06799869.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis 210]
 gi|297635339|ref|ZP_06953119.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732335|ref|ZP_06961453.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis KZN R506]
 gi|306777010|ref|ZP_07415347.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu001]
 gi|306780913|ref|ZP_07419250.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu002]
 gi|306798636|ref|ZP_07436938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu006]
 gi|306973125|ref|ZP_07485786.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu010]
 gi|313659668|ref|ZP_07816548.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis KZN V2475]
 gi|54040612|sp|P67086|MIAB_MYCBO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|54042947|sp|P67085|MIAB_MYCTU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890564|sp|A1KM71|MIAB_MYCBP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890569|sp|A5U685|MIAB_MYCTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|2292967|emb|CAB10909.1| CONSERVED HYPOTHETICAL ALANINE, ARGININE-RICH PROTEIN
           [Mycobacterium tuberculosis H37Rv]
 gi|31619499|emb|CAD94937.1| CONSERVED HYPOTHETICAL ALANINE, ARGININE-RICH PROTEIN
           [Mycobacterium bovis AF2122/97]
 gi|121494256|emb|CAL72734.1| Conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124601891|gb|EAY60901.1| conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium tuberculosis C]
 gi|134150900|gb|EBA42945.1| conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506726|gb|ABQ74535.1| conserved hypothetical alanine and arginine rich protein
           [Mycobacterium tuberculosis H37Ra]
 gi|148722448|gb|ABR07073.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis F11]
 gi|224774215|dbj|BAH27021.1| hypothetical alanine, arginine-rich protein [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|289417194|gb|EFD14434.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis T46]
 gi|289421346|gb|EFD18547.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis CPHL_A]
 gi|289544663|gb|EFD48311.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis T17]
 gi|289695423|gb|EFD62852.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710410|gb|EFD74426.1| conserved hypothetical alanine, arginine-rich protein
           [Mycobacterium tuberculosis GM 1503]
 gi|308214667|gb|EFO74066.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu001]
 gi|308326311|gb|EFP15162.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu002]
 gi|308341151|gb|EFP30002.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Mycobacterium
           tuberculosis SUMu006]
 gi|308357524|gb|EFP46375.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis SUMu010]
 gi|326904348|gb|EGE51281.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis W-148]
          Length = 512

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 153 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 206

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 264

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 265 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 324

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 325 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 380

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 381 AVVQERYERLI 391


>gi|311694651|gb|ADP97524.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [marine bacterium HP15]
          Length = 298

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 63/176 (35%), Gaps = 7/176 (3%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +C    + +  K  +    +  L +++   +  G   +  +F   G   ++  + + 
Sbjct: 34  KCTFC--EMYTQPQKKFRARKPEDVLQDIRNAARSLGG--VRRVFLADGDAMVLPTRRLL 89

Query: 91  LILDGIAK-NWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            IL  + +    +       +  N +   V      + AG+  + +G++S +++ LR + 
Sbjct: 90  EILGQLREAFPDLQRVSSYCLPRNLAKKTVEELAQLKDAGLEILYVGMESGDDEILRRVN 149

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM--TQWEMELQRALSYAVDHLS 203
           +        +A+   R      S  ++  L  + +                 D+LS
Sbjct: 150 KGETWESTRSALLKIREAGLTSSVMVLNGLGGENLSRQHAINTATLCNETQPDYLS 205


>gi|300780998|ref|ZP_07090852.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Corynebacterium
           genitalium ATCC 33030]
 gi|300532705|gb|EFK53766.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Corynebacterium
           genitalium ATCC 33030]
          Length = 520

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 54/147 (36%), Gaps = 12/147 (8%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + +  +    A+
Sbjct: 252 TSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKDMRRSYRSKKFLGILDEVRAK 311

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
                ++ D+I   P +T   ++  L             +Q +   GT   +M    D  
Sbjct: 312 LPHASITTDIIVGFPGETEEDFQATLNVVEKARFTSAYTFQYSPRPGTPAAEM----DGQ 367

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAYE 252
           +P E V        + + +     +YE
Sbjct: 368 VPKEVVQERF----ERLLALQERISYE 390


>gi|160901569|ref|YP_001567150.1| MiaB-like tRNA modifying enzyme YliG [Petrotoga mobilis SJ95]
 gi|238066434|sp|A9BEU9|RIMO_PETMO RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|160359213|gb|ABX30827.1| MiaB-like tRNA modifying enzyme YliG [Petrotoga mobilis SJ95]
          Length = 435

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 77/234 (32%), Gaps = 15/234 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C   +   + K          + E+    +    + +  I       +L    
Sbjct: 150 CSRNCAFCSIPTFKGKPKSRS-------IEEINEEVEFLVSKGVKEIILVSQDNTLYGID 202

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           N     + D + K   +     I +   +P  +     +   +    +N   + +Q + +
Sbjct: 203 NYQKQALPDLLDKLNNIKGKFWIRVMYLHPDFLSEEIIESIHRNEKVLNYFDVPIQHISD 262

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           + L+ +GR+   +E I      R     +   L+   P +    +E  +        + +
Sbjct: 263 KILQSMGRHKKRNELIKLFEKIRKEPSAIRTTLMVGFPGEKAEDFEELVDFVKEIKFERM 322

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVL---PSENVAVDLYNLTQSITSAHGLHAYEI 253
             +  + E+ T  + + +  D  +       +      ++++I   +     E+
Sbjct: 323 GSFIFSKEENTKSFTLPEQIDEQIKKQRQNELMTVQSEISKNIMEKYIGETLEV 376


>gi|312879914|ref|ZP_07739714.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
 gi|310783205|gb|EFQ23603.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
          Length = 311

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 74/232 (31%), Gaps = 20/232 (8%)

Query: 28  CVKK-------CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFG 77
           C  +       C YCD     R    G      S   +++   +    R       ++F 
Sbjct: 31  CPHRNDLASGGCLYCD----ERGGGDGAALLGLSLPEQVRQKARPLKRRFPSPRVFLYFQ 86

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVS--SNVEITIEANPSSVEVNNFQGYRKAGVNR--- 132
             + +   P+ +   +    +       S + +     P  +     +   + G      
Sbjct: 87  SYSCTQDPPEILEAKVRQARETAREEGLSVLGLAFGVRPDQIPAPFLETATRWGDEGLEV 146

Query: 133 -ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMEL 191
            I +GVQ+LEE  L +L R H A  A  A  + R     +   LI  +P     +   + 
Sbjct: 147 WIEVGVQTLEEDQLVWLRRGHGAGAAEDAARILRGRGLFLCAHLIGGIPGDDPERLARDA 206

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
                +    L L+ L + +G     +++ G      E V  D      +  
Sbjct: 207 STLARWGFHALKLHPLHVLRGAALEDLYRRGLFTPVPEEVYRDQVVRALATL 258


>gi|303239514|ref|ZP_07326040.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
 gi|302592892|gb|EFL62614.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
          Length = 568

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 14/221 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C +C       +Y+    N I      +     L          FG    SL+ P 
Sbjct: 274 CPFQCSFCSETVQWGKYRKKDANQI------VDETLMLYKKHGSQLFLFGD---SLLNP- 323

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +   L         S   +  + A+    +  N   +R+ G  R  +GV+S  ++ L  
Sbjct: 324 -VIEDLADEYIRRGESIYWDGYLRADKHVCDPENTFKWRRGGFYRARIGVESGSQRVLNL 382

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     +   AI        + +   +   P +T   +   L      A +   +Y+ 
Sbjct: 383 MDKRTKIEQIKEAISSLAYAGIKTTTYWVIGFPGETEEDFMETLNLIEELADN---IYEA 439

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
                  F     D + +     +++      + +   +  
Sbjct: 440 ECNPYNYFISGQVDSNKLKNENEISLLYPQYAEKLLMGNTW 480


>gi|261403069|ref|YP_003247293.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
 gi|261370062|gb|ACX72811.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
          Length = 368

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 12/207 (5%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ-LTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  C +       K+  EN I  F   ++  +  L   R  S   F  G  S ++ + + 
Sbjct: 65  CLMCSYLMDSSPEKLTAENIINQFDYAIEKYKDDLKNLRDFSVKIFTSG--SFLDDREVP 122

Query: 91  LILDG--IAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV--QSLEEQSL- 145
                    +  +  +  EI IE+ P  +  N     R      + +GV  +S  E+   
Sbjct: 123 KKARAHIYKELSSFDNLKEIAIESRPEFITENRLSEIRDHLSTNVEIGVGIESFNEEIRE 182

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS----FDLIYALPKQTMTQWEMELQRALSYAVDH 201
           + + +     + I A+ L++N    +        ++   K+ +          +      
Sbjct: 183 KAINKGITMEDIIKAVELSKNYNIGIKAYLLIKPLFIREKEAILDSIHSAISCIKIGCSR 242

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPS 228
           +S    T+ KG++            P 
Sbjct: 243 ISFCPATVHKGSVMEYFFNKNQYRPPF 269


>gi|262202865|ref|YP_003274073.1| biotin synthase [Gordonia bronchialis DSM 43247]
 gi|262086212|gb|ACY22180.1| biotin synthase [Gordonia bronchialis DSM 43247]
          Length = 345

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 81  CPEDCHFCSQSGLFASPVRSAWID----IPSLVEAAKQTAKTGATEFCIVAAVRGPD--- 133

Query: 84  IEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                   +L  +A     + + V+I I  +   +        R  GV+R +  +++   
Sbjct: 134 ------KRLLSQVAAGIEAIRNEVDIQIACSLGMLTQEQVDQLRDMGVHRYNHNLETARS 187

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
                +   H   E    + + R+    +    I  +  +++ Q         S   D +
Sbjct: 188 HFPNVVT-THTWEERWDTLRMVRDAGMEVCCGGILGM-GESLEQRAEFAADLASLEPDEV 245

Query: 203 SLYQLTIEKGTLFYKM 218
            L  L    GT F  +
Sbjct: 246 PLNFLNPRPGTPFGDL 261


>gi|116749020|ref|YP_845707.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
           MPOB]
 gi|238066613|sp|A0LIM0|RIMO_SYNFM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|116698084|gb|ABK17272.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
           MPOB]
          Length = 444

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 73/229 (31%), Gaps = 26/229 (11%)

Query: 6   AYENNMTGQGSNSL-----GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           A+ +++       L       YV     C  +C +C     + R +     +      ++
Sbjct: 129 AFPDHVDNGADRHLVEGRSSAYVKIAEGCGNRCAFC----LIPRLRGP---YRSRRAVDI 181

Query: 60  QWMRQLTGPRSISSIFFGGGTPSLI-----EPQNIALILDGIAKNWTVSSNVEITIEANP 114
                         +       +       E   +  +L+ + +   +       + A P
Sbjct: 182 LREAHRLVACGAKELNIVAQDTTAFGSDRGEEHALVSLLESLEEIEKLEWVR--LLYAYP 239

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
             +     +   ++   V  + + +Q    + L  +GR  + ++    +   R+  P ++
Sbjct: 240 DRITPELIRTMSQSRKVVPYLDIPLQHCVPRILASMGR--SGTDPERIVDAIRSGIPGVA 297

Query: 173 F--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
               LI   P +T   ++           +HL ++  + E GT   +M 
Sbjct: 298 LRTSLIVGFPGETEADFQALTAFVECTGFEHLGVFAFSPEPGTRAARMP 346


>gi|86606951|ref|YP_475714.1| MiaB tRNA modifying enzyme-like protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86555493|gb|ABD00451.1| MiaB tRNA modifying enzyme-like protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 439

 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 15/216 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C  +C +C     +   +  Q    I+S L E + +        I  S I    G    +
Sbjct: 145 CDYRCSFC----IIPHLRGKQRSRPIESILREAEQLAAEGVQELILISQITTNYG----L 196

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
           +      + + I     +       + A P+ +     +  ++    +  + L +Q    
Sbjct: 197 DLYGEPRLAELIRALGQIPIPWIRMLYAYPTGITPAVVEAIQETPNFLLYLDLPLQHSHP 256

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R          I   R   P+       I   P +T   ++  L+    +  D
Sbjct: 257 AILKAMNRPWQGQVNDRLIERLRQALPKAVLRTSFIVGFPGETEEHFQHLLEFVQRHQFD 316

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
           H+ ++  + E+GT  Y + +     L  E  A  + 
Sbjct: 317 HVGVFTFSPEEGTPAYHLPQQVPEPLKEERRARLMQ 352


>gi|319892634|ref|YP_004149509.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162330|gb|ADV05873.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 449

 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKKVIEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +     +  +++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETVDGLERIRISSIEAS--QLTDEVIEVLQQSQKVVRHLHIPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     I           ++ D+I   P +T  +++      +++    L 
Sbjct: 268 KRMRRKYSMAHFSERIQKLHAALPGLAVTSDVIVGFPGETEAEFQETYDFIVNHHFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|296109521|ref|YP_003616470.1| RNA modification enzyme, MiaB family [Methanocaldococcus infernus
           ME]
 gi|295434335|gb|ADG13506.1| RNA modification enzyme, MiaB family [Methanocaldococcus infernus
           ME]
          Length = 411

 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEME 190
           + L +QS +++ L+ +GR ++  E I+ +   +     + F  D+I   P +T   +   
Sbjct: 245 LHLPLQSGDDEILKLMGRGYSVDEFISIVKEFKRKVKDLCFTTDVIVGFPGETEEAFNNT 304

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           L+       D++   + T  KGT   +M
Sbjct: 305 LEVLRKLKPDYIHGAKYTQRKGTEAARM 332


>gi|206559438|ref|YP_002230199.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
 gi|198035476|emb|CAR51354.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
          Length = 473

 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 88/244 (36%), Gaps = 19/244 (7%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ-SITSAHGLHAYE 252
           A       + +       GT  YK   +   +  ++ + +      Q +      L   E
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRDE 421

Query: 253 ISNH 256
           I +H
Sbjct: 422 IYHH 425


>gi|327404270|ref|YP_004345108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Fluviicola taffensis DSM
           16823]
 gi|327319778|gb|AEA44270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Fluviicola taffensis DSM
           16823]
          Length = 479

 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 5/123 (4%)

Query: 102 VSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAI 158
           +  ++ I     +P  +  +  +   K       I L VQS     L  + R ++    +
Sbjct: 262 IHPDLRIRFSTSHPKDMTDDVLEMMAKYENICPYIHLPVQSGNSNVLERMNRGYSREWYL 321

Query: 159 AAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
             I   + I P   +S D+I     +T  + +  +        D   +++ +    TL  
Sbjct: 322 ERIAAIKRIIPDCAISTDIITGFCGETEEEHQETVSLMREVGYDFAYMFKYSERPKTLAE 381

Query: 217 KMH 219
           +  
Sbjct: 382 RKF 384


>gi|323464328|gb|ADX76481.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 449

 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 71/200 (35%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKKVIEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +     +  +++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETVDGLERIRISSIEAS--QLTDEVIEVLQQSQKVVRHLHIPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     I           ++ D+I   P +T  +++      +++    L 
Sbjct: 268 KRMRRKYSMAHFSERIQKLHAALPGLAVTSDVIVGFPGETEAEFQETYDFIVNHHFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|86142709|ref|ZP_01061148.1| hypothetical protein MED217_07336 [Leeuwenhoekiella blandensis
           MED217]
 gi|85830741|gb|EAQ49199.1| hypothetical protein MED217_07336 [Leeuwenhoekiella blandensis
           MED217]
          Length = 447

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 68/200 (34%), Gaps = 14/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + +Q+ L   + +        + + +  G    G   +
Sbjct: 155 CDYKCTYC---TIPLARGISRSDTLQNVLKNAREISAQGIREIVLTGVNIGDYGKGEFGN 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                    ++  + +   +      +IE  P+ ++    +     +A V    + +QS 
Sbjct: 212 KKHEHTFLDLVKALDQVEGIERLRISSIE--PNLLKNETIEVVAASRAFVPHFHIPLQSG 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +     +  +   + + P   +  D+I   P +T   +           
Sbjct: 270 NNEMLGKMRRRYRRELYVDRVAAIKKLMPDACIGVDVIVGFPGETDEHFLDTYNFLNELD 329

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           + +L ++  +    TL   M
Sbjct: 330 ISYLHVFTYSERDNTLAADM 349


>gi|297527331|ref|YP_003669355.1| RNA modification enzyme, MiaB family [Staphylothermus hellenicus
           DSM 12710]
 gi|297256247|gb|ADI32456.1| RNA modification enzyme, MiaB family [Staphylothermus hellenicus
           DSM 12710]
          Length = 429

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 26/214 (12%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y+     C+  C +C         K  +   +   + +++   +    + +  I   G  
Sbjct: 140 YLPIQEGCLGNCSFC-------IVKNARRQLVSYPINKIKNTVEELVGKGVVEIELTGQD 192

Query: 81  PS-----LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRK------A 128
            +     L   Q +  +L+ + +   +  N  I I   NP ++  N      +       
Sbjct: 193 TASYGLDLYGKQKLPHLLEELDR---IKGNFMIRIGMMNPDTL-ANILDELVEIIKYSAH 248

Query: 129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
               + + +QS  ++ LR + R +   E    I   R   P +S   D+I   P +    
Sbjct: 249 IYRFLHIPLQSGSDKVLRVMKRKYTVDEYREIIKTLRKKIPEISIATDIIVGHPGEEEED 308

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +E  L        + +     +I   T    + +
Sbjct: 309 FEQTLSIIKELKFERIHPAVYSIRPNTYSASLRQ 342


>gi|256370700|ref|YP_003108525.1| putative MiaB-like protein [Candidatus Sulcia muelleri SMDSEM]
 gi|256009492|gb|ACU52852.1| putative MiaB-like protein [Candidatus Sulcia muelleri SMDSEM]
          Length = 435

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 65/196 (33%), Gaps = 8/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGTPSLIEP 86
           C  KC YC   +  +     + + I + +   + + ++      ++ +  G    +L   
Sbjct: 153 CDYKCSYC---TIPKARGTSKSDDITNIIKYAKNVIKKGIKEIVLTGVNIGDFGKNLKPK 209

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
            N   ++  +   +             P+ +  +        K  V+   + +QS  ++ 
Sbjct: 210 SNFLELMKAMDSFFYKKIIRIRISSIEPNLLNDDLINFILKSKIFVHHFHIPLQSGSDEI 269

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R ++++     I   +N+ P      D+I   P +    +           + + 
Sbjct: 270 LNKMKRRYSSNFFEKKIIQIKNLMPNACIGSDVIVGFPGEQEKNFIETYLFLSKLDISYF 329

Query: 203 SLYQLTIEKGTLFYKM 218
            ++  +    T    M
Sbjct: 330 HVFSYSERINTEAISM 345


>gi|289578123|ref|YP_003476750.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
 gi|289527836|gb|ADD02188.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
          Length = 449

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 67/199 (33%), Gaps = 11/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC     +   +    +  +     ++ +R+         +  G    S  +  
Sbjct: 166 CNQYCTYC----IIPYARGPVRS--REPEKILEEVRRFADSGYKEIVLTGIHIASYGKDL 219

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
               +LD I +   +     I +    P  +     +   K         + +QS  +++
Sbjct: 220 KNIGLLDIIKRIHEIDGIKRIRLSSIEPVFLTEEFVKEIAKLPKMCRHYHVSLQSGCDET 279

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ +GR +   E  + I   R     ++   D++   P +T  ++    +         +
Sbjct: 280 LKRMGRRYTTKEYKSVIDRLRKYIKDVAITTDVMVGFPGETEEEFFETYKFVEEICFSKM 339

Query: 203 SLYQLTIEKGTLFYKMHKD 221
            +++ +  KGT  Y     
Sbjct: 340 HVFKYSRRKGTRAYSFPNQ 358


>gi|257065787|ref|YP_003152043.1| Radical SAM domain-containing protein [Anaerococcus prevotii DSM
           20548]
 gi|256797667|gb|ACV28322.1| Radical SAM domain protein [Anaerococcus prevotii DSM 20548]
          Length = 347

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R+     E +  S   E+     L       +    GG        
Sbjct: 55  CKNDCYYCG----IRKSNDKVERYRLS-EEEILACADLGYKLGYRTFVLQGGEDGHFTDD 109

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               I   + K   +  +V IT+     S    +++   +AG +R  L  ++ ++     
Sbjct: 110 MFVDI---VKKIKNLHDDVAITLSLGERSY--ESYKKLFEAGADRYLLRQETSDKDHYSK 164

Query: 148 LGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           L     +      A+   + I  ++    +   P Q       +L+         + +  
Sbjct: 165 LHPETMSFESRRQALRDLKEIGFQVGGGFMVGSPYQKTEDIIKDLRFLEELEPAMIGIGP 224

Query: 207 LTIEKGTLFYKMHK 220
              +  T F     
Sbjct: 225 YMTQHDTPFKDFPN 238


>gi|220932034|ref|YP_002508942.1| MiaB-like tRNA modifying enzyme [Halothermothrix orenii H 168]
 gi|219993344|gb|ACL69947.1| MiaB-like tRNA modifying enzyme [Halothermothrix orenii H 168]
          Length = 442

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC    ++R     +       + ++       G + I  I       +     
Sbjct: 154 CDNRCTYCSIP-YIRGKLTSRP------IEDIYNEVVKLGQQGIKEIILVAQDTTQYGKD 206

Query: 88  NIAL--ILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 +L  + +   + S   I +    P  +         +     N + L +Q    
Sbjct: 207 IYGKSMLLPLLKELVEIDSIKWIRLLYCYPERITDELLFFIAENNKICNYLDLPIQHSSN 266

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           +  R + R  +  E I  I   R + P +     LI   P +T   +            D
Sbjct: 267 KIRRLMNRKGSREELINLIKRVRELVPDIVIRTSLIVGFPGETDEDFNDLFNFVKEIKFD 326

Query: 201 HLSLYQLTIEKGTLFYKMH 219
            L +++ + E+ T      
Sbjct: 327 RLGVFKYSREENTPAASFP 345


>gi|320120553|gb|EFE28955.2| radical SAM domain-containing protein [Filifactor alocis ATCC
           35896]
          Length = 309

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 62/209 (29%), Gaps = 20/209 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C +C      DF S         E  I     +    + +   +S ++ +          
Sbjct: 46  CLFCSEKGSGDFTSCADSITEQMEQQISLLSNKWNNAKYIAYFQSFTNTY---------- 95

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEE 142
             ++  +     +       V + I   P  +                  I LG+Q++ E
Sbjct: 96  -ADVKELKKKYDEALDFPDVVGLAIATRPDCLSEEILDLLESYSKQTFLWIELGLQTIHE 154

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +S   L R +  S    AI        R    +I  +P +T  Q            +  L
Sbjct: 155 KSAVLLRRGYPLSTFDDAIKNLHERNIRTVVHMILNIPYETQQQMRETAIYLSKKTIWGL 214

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
            ++ L +   +   K+++     + S   
Sbjct: 215 KIHMLYVSSDSDLGKLYQQNTFPVFSREE 243


>gi|289758861|ref|ZP_06518239.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289714425|gb|EFD78437.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
          Length = 423

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 23/230 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 186 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 239

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 240 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 297

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 298 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 357

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
             ++ DLI   P +T   +   L             +Q +   GT   ++
Sbjct: 358 AAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL 407


>gi|240140881|ref|YP_002965361.1| putative Fe-S oxidoreductase [Methylobacterium extorquens AM1]
 gi|240010858|gb|ACS42084.1| putative Fe-S oxidoreductase [Methylobacterium extorquens AM1]
          Length = 357

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 79/226 (34%), Gaps = 12/226 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC       R++          +     + +L     +  I F    P++   +
Sbjct: 51  CPHPCTYCGQRGFWTRWRHRDP------VRFAAELARLHREHGVRVINFADENPTV--SK 102

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +            V   +  +  A+    + +    Y++AG  R  LG++S +  +L  
Sbjct: 103 KVWRTFLEALIAENVDLILVGSTRADDIVRDADILPLYKRAGWERFLLGLESTDTATLDL 162

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +    +    AI L R          +    ++    +   L++ L+Y  D + +  +
Sbjct: 163 IRKGATTTTDREAIRLLRANGILSMATWVVGFEEERDRDYWRGLRQLLAYDPDQIQMLYV 222

Query: 208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           T  + T ++++ ++  +      +    ++    + +   +  + +
Sbjct: 223 TPHRWTPYFRLAEERRV----IQLDRRRWDYKHQVLATRHMPPWRV 264


>gi|227538337|ref|ZP_03968386.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241852|gb|EEI91867.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 447

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C Y C F +        +   I+  + + + +   +G + I       G   + + +   
Sbjct: 159 CDYSCTFCTIPLARGASRSGKIEDIVRQAEEIAA-SGVKEIVLTGVNIGDFGVRDGERQD 217

Query: 91  LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRF 147
             LD +     V     I I    P+ +  +  +     K  V    + +QS   + L  
Sbjct: 218 RFLDLVKALDEVEGIDRIRISSIEPNLLANDIIEFVAQSKRFVPHFHMPLQSGNNKILGM 277

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +        +   +++ P   +  D+I   P +T   +           + +L ++
Sbjct: 278 MRRRYKRELYAERVEKIKSLMPDCCIGVDVIVGFPGETREDFLDTYNFLNEMDISYLHVF 337

Query: 206 QLTIEKGTLFYKM 218
             +  + T+  +M
Sbjct: 338 TYSERENTIAAQM 350


>gi|25010581|ref|NP_734976.1| biotin synthetase [Streptococcus agalactiae NEM316]
 gi|77408398|ref|ZP_00785138.1| biotin synthetase [Streptococcus agalactiae COH1]
 gi|77411426|ref|ZP_00787772.1| biotin synthetase [Streptococcus agalactiae CJB111]
 gi|77413553|ref|ZP_00789741.1| biotin synthetase [Streptococcus agalactiae 515]
 gi|81457429|sp|Q8E6Q1|BIOB_STRA3 RecName: Full=Biotin synthase
 gi|23094934|emb|CAD46155.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160382|gb|EAO71505.1| biotin synthetase [Streptococcus agalactiae 515]
 gi|77162512|gb|EAO73477.1| biotin synthetase [Streptococcus agalactiae CJB111]
 gi|77173001|gb|EAO76130.1| biotin synthetase [Streptococcus agalactiae COH1]
          Length = 330

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC  +              Q+ + +   +    G  S+  I   G  PS  E +
Sbjct: 68  CAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGA-SVFCIAMSGTKPSKREIE 126

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  I K+  +    EI + A    ++       ++AG++RI+  + + EE     
Sbjct: 127 QLCQVIPEIKKSLPL----EICLTA--GFLDREQLHQLKQAGIDRINHNLNTPEENY-PN 179

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +   H+  +    +    N    +    I  +  ++         R        + +  L
Sbjct: 180 IATTHSFKDRCDTLERIHNEDIDVCSGFICGM-GESDEGLITLAFRLKELNPYSIPVNFL 238

Query: 208 TIEKGTLFYK 217
              +GT   K
Sbjct: 239 LAVEGTPLGK 248


>gi|332881524|ref|ZP_08449173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680522|gb|EGJ53470.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 441

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E       + +  +R L           G    S +   
Sbjct: 155 CNNFCHYC-----IVPYTRGRERSRD-VESILNEVRDLKKRGYKEVTLLGQNVNSYLHEG 208

Query: 88  N------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                     +L  +A           T  ++P  +  +  +   +       I L VQS
Sbjct: 209 ADGKTVSFPELLRLVAHEADGMRVRFTT--SHPKDMSDDTLRVIAEEPNVCRHIHLPVQS 266

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R +     +  +   R I P   +S D+      +T    +M L      
Sbjct: 267 GSNRILKLMNRKYTREWYLDRVAAIRRIVPDCGLSTDIFSGYCSETEEDHQMSLSLMREC 326

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
           A D   +++ +   GT   K
Sbjct: 327 AYDSAFMFKYSERPGTYASK 346


>gi|282881454|ref|ZP_06290128.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304680|gb|EFA96766.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
          Length = 436

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 86/252 (34%), Gaps = 10/252 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC       ++K   +  +         + Q      + +         +   Q
Sbjct: 149 CDRQCAYCAIPLMTGKHKSRLK--LDILTEVKDMVAQGVKEFQVIAQELTYYGRDIDGKQ 206

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           +IA ++  IA+   V         A P+   +      R+     N + + +Q + +  L
Sbjct: 207 HIADLISAIAEIEGVQWIRLHY--AYPNQFPLELLDVIRENKKVCNYLDIALQHISDGVL 264

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+    E +  I    A+     +   L+   P +T  +++  L        + + 
Sbjct: 265 SRMHRHVTKLETLNLIKTIRAKAPGIHLRTTLMVGFPGETEEEFQELLDFVRWARFERMG 324

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
            +  + E+GT    +H   D+ L  +   +D     Q   S   + A +I     +  + 
Sbjct: 325 AFMYSEEEGTY-GALHYQDDVSLAVKQQRLDQLMAVQQEIS-AEIEAEKIGKTMKVIIDR 382

Query: 264 LHNLNYWRYGDY 275
             N  Y    +Y
Sbjct: 383 KENDYYIGRTEY 394


>gi|268324561|emb|CBH38149.1| probable FO synthase, subunit 2 2 [uncultured archaeon]
          Length = 358

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 67/180 (37%), Gaps = 17/180 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C +C F +     K  +E+++ S    ++ + +         +  GG  P +   +
Sbjct: 67  CVSSCKFCAFYA-----KNSEESYVLSKEEILRKVEETVDVGGTQILIQGGHNPEI-SIE 120

Query: 88  NIALILDGIAKNWT------VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSL 140
               ++  I + +       +S      I  N         +  R+AG++ +   G + L
Sbjct: 121 WYEDLISTIKREYPEVQLHSLSPPEIYFIARNEGIGIRETLERLREAGLDSLPGGGAEIL 180

Query: 141 EEQSLRFL--GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  + +   +   A + I  + +A +I  + +  +++    +T  +    L R     
Sbjct: 181 SDRVRKVISPNKV-GADDWIEVMEIAHSIGMKTTATMMFGHI-ETNEEIVEHLFRIRDLQ 238


>gi|160890923|ref|ZP_02071926.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
 gi|317479661|ref|ZP_07938785.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
 gi|156859922|gb|EDO53353.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
 gi|316904162|gb|EFV25992.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
          Length = 438

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +        G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGSIASMVEQ-ASQAAAEGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIE--PNLLTDEIIEYVSRSRRFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + I   + + P   +  D+I     +T   +    +   S  V  L 
Sbjct: 273 KLMRRRYDTALFASKIKKIKEVMPDSFIGVDVIVGTRGETEEYFGQAYEFIKSLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|149278722|ref|ZP_01884858.1| 2-methylthioadenine synthetase [Pedobacter sp. BAL39]
 gi|149230717|gb|EDM36100.1| 2-methylthioadenine synthetase [Pedobacter sp. BAL39]
          Length = 444

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                +Q  + E + +        I     + + G     +
Sbjct: 158 CNRPCSFCA---IPLMRGKHVSRDMQELVNEAKILAANGTKELILIAQDLTYYG-----L 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           +      + + + +   V+    I ++ A PS   +        R      + + +Q + 
Sbjct: 210 DIYGKRNLDELLRRLSDVNGIEWIRLQYAYPSGFPMEILDAMNERDNICKYLDMPLQHIT 269

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     + I  ++  R+  P ++    LI   P +T   +E  L        
Sbjct: 270 DNMLKSMRRGITKQKTIDIVNQIRDKVPNIAMRTTLICGYPGETEQDFEEMLSWVEDTRF 329

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D L  +  + E+ T  + + 
Sbjct: 330 DRLGCFTYSHEEKTHAHNLV 349


>gi|116072319|ref|ZP_01469586.1| hypothetical protein BL107_11046 [Synechococcus sp. BL107]
 gi|116064841|gb|EAU70600.1| hypothetical protein BL107_11046 [Synechococcus sp. BL107]
          Length = 518

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 17/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGTPS 82
           C ++C YC   S   + +  Q   I+  +  +       G + I+ +      +G   P 
Sbjct: 221 CNERCTYCVVPSVRGQEQSRQPGAIRLEMEGLAAQ----GFKEITLLGQNIDAYGRDLPG 276

Query: 83  L-IEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  E +    + D + +   V     +     +P                      +  Q
Sbjct: 277 ITAEGRREHTLTDLLHQVHDVEGLERLRFATSHPRYFTERLIDACADLPKVCEHFHIPFQ 336

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALS 196
           S + + L+ + R +        I   R+  P   +S D+I   P +T  Q+   L     
Sbjct: 337 SGDNELLKSMARGYTVERYRRIIDRIRDRMPDASISADVIVGFPGETDAQYRRTLNLIDE 396

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            A D ++    +    T       D  L    +   +   N      +      Y+
Sbjct: 397 IAFDQVNTAAYSPRPNTPAAT--WDNQLSESVKVERLKEINALVERNARERNARYQ 450


>gi|312178702|gb|ADQ39284.1| hypothetical protein nle15_1 [uncultured bacterium]
          Length = 444

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 69/198 (34%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C  KC YC   +      + + + +Q+ L   + + +      + + +  G  G      
Sbjct: 154 CDYKCTYC---TIPLARGISRSDTLQNVLDNAKKISEKNIREIVLTGVNIGDYGKGEFGN 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            ++    LD +     V     + I    P+ ++        ++   V    + +QS   
Sbjct: 211 KKHEHTFLDLVKALDGVEGIERLRISSIEPNLLKNETIDFVAQSNAFVPHFHIPLQSGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +     +  +   +   P   +  D+I   P +T   +           V 
Sbjct: 271 EVLKNMRRRYMKELYVDRVARIKETMPDACIGVDVIVGFPGETDEHFLESYNFLNDLDVS 330

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +L ++  +  + T+  +M
Sbjct: 331 YLHVFTYSERENTVAAEM 348


>gi|300858669|ref|YP_003783652.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium pseudotuberculosis FRC41]
 gi|300686123|gb|ADK29045.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium pseudotuberculosis FRC41]
 gi|302206376|gb|ADL10718.1| (Dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium pseudotuberculosis C231]
 gi|302330932|gb|ADL21126.1| (Dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium pseudotuberculosis 1002]
 gi|308276619|gb|ADO26518.1| (Dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium pseudotuberculosis I19]
          Length = 512

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
            + +L        +          +P+    +      +      ++ + +QS  ++ L+
Sbjct: 233 FSKLLRACGDIEGLDRLRF--TSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLK 290

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R++ + + +A +   R   P  S   D+I   P +T   ++  L+            
Sbjct: 291 EMRRSYRSKKFLAILDEVREKIPHASITTDIIVGFPGETEEDFQATLEVVEKARFTSAYT 350

Query: 205 YQLTIEKGTL 214
           +Q +   GT 
Sbjct: 351 FQYSPRPGTP 360


>gi|291559329|emb|CBL38129.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
           SSC/2]
          Length = 440

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +  Y  G+    +     ++ +  LT       +  G    S    +
Sbjct: 160 CNQFCSYC-----IIPYARGRVRS-RKMEEVLEEITNLTKHGCQEFVITGIHVTSYGKDL 213

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEE 142
               +  +L+ IAK   V      ++E  P  +  +      K         L +QS  +
Sbjct: 214 GDVTLIDLLEEIAKIPEVKRIRLGSLE--PGFITKDTLDRLSKMESFCPHFHLSLQSGCD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +   +        R  F  P ++ D+I   P +T  ++E   +      + 
Sbjct: 272 SVLKRMNRKYTTQDIREKCKAIREHFQYPALTTDIIVGFPGETEEEFEETRKFLEEIDLY 331

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + +++ +I KGT    M
Sbjct: 332 EMHVFKYSIRKGTKAADM 349


>gi|303286521|ref|XP_003062550.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456067|gb|EEH53369.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 542

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 15/200 (7%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ KC YC    H R        E  +    T +          S  +  +G    +   
Sbjct: 255 CLGKCTYCK-TKHARGELGSYAPEALVARVQTAIAEGVTEIWLSSEDTGAYGIDLGT--- 310

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF----QGYRKAGV-NRISLGVQSL 140
             ++  +L  +        +  + +        + +     +     GV   + + VQ+ 
Sbjct: 311 --DVTRLLRDVTAALPKDGSCMLRLGMTNPPYILAHLDAVAEAMHHPGVYAFLHIPVQAG 368

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +       P ++   D+I   P +T   WEM +     Y 
Sbjct: 369 SDAVLGRMKREYVVADFEKVVDTLLERVPGITIATDIICGFPGETEEDWEMTMALCRKYD 428

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L L Q     GT   +M
Sbjct: 429 FIELHLSQFYPRPGTPAARM 448


>gi|15614311|ref|NP_242614.1| biotin synthase [Bacillus halodurans C-125]
 gi|81787034|sp|Q9KC26|BIOB_BACHD RecName: Full=Biotin synthase
 gi|10174366|dbj|BAB05467.1| biotin synthase [Bacillus halodurans C-125]
          Length = 333

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 62/192 (32%), Gaps = 13/192 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLI 84
           FC + C YC  +S     K   + +       +    +     ++ +      G  P+  
Sbjct: 63  FCPENCGYCSQSSI---SKAPIDAYPMVNKETILEGAKRAHELNVGTYCIVASGRGPTNR 119

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +  ++   +  I   + +     + I      ++    +  + AGV+R +  V +     
Sbjct: 120 DIDHVTEAVREIKDTYGLKICACLGI------LKPEQAEQLKAAGVDRYNHNVNTSARHH 173

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +  +H   + +  + + ++        +I  + K+T         +      D + +
Sbjct: 174 -DQITTSHTYEDRVNTVEVVKHSGISPCSGVIVGM-KETKEDVVDMAFQLRELDADSIPV 231

Query: 205 YQLTIEKGTLFY 216
             L    GT   
Sbjct: 232 NFLHAIDGTPLQ 243


>gi|145219858|ref|YP_001130567.1| radical SAM domain-containing protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206022|gb|ABP37065.1| Radical SAM domain protein [Chlorobium phaeovibrioides DSM 265]
          Length = 469

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/234 (10%), Positives = 78/234 (33%), Gaps = 17/234 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +    +E  +   L EM++ ++  G +S +  F          P+
Sbjct: 207 CPVGCNFCTTPTIYGKNYRYRE--LDLVLDEMRYHQERLGKKSANFSFMDDNI--SFRPK 262

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNRISLGVQSLEEQSLR 146
               +L+ ++K       +      + + ++         ++G + +S+G ++L  ++++
Sbjct: 263 YFLTLLEEMSKL-----GIHWNANISMNFLDKPEVAELAGRSGCDLLSIGFETLNPETIK 317

Query: 147 FLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            + +  N        ++        +    ++     T   +++     +   ++     
Sbjct: 318 SVHKGSNKIGNYEKVVNNLHQNGIAIQGYFMFGFDNDTEESFQLTYDFIMKNRIEFPVFS 377

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
            +T   GT ++   K        +      Y         +++         E+
Sbjct: 378 LVTPFPGTPYFDEMKPRIRHFDWDKYDTYHYMFEPTGMSGETLLKNFVKLQQEV 431


>gi|325285087|ref|YP_004260877.1| MiaB-like tRNA modifying enzyme [Cellulophaga lytica DSM 7489]
 gi|324320541|gb|ADY28006.1| MiaB-like tRNA modifying enzyme [Cellulophaga lytica DSM 7489]
          Length = 442

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 70/198 (35%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM-QWMRQLTGPRSISSIFFG-GGTPSLIE 85
           C  KC YC   +      + + + +++ L    +   +      ++ +  G  G      
Sbjct: 152 CDYKCTYC---TIPLARGISRSDTLENVLKNATEISAKNIKEIVLTGVNIGDYGKGEFGN 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            ++    LD +    TV     + I    P+ ++        K+   V    + +QS  +
Sbjct: 209 KKHQHTFLDLVKALDTVDGIHRLRISSIEPNLLKNETIDFVSKSNSFVPHFHIPLQSGSD 268

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +  +  I  +   + + P   +  D+I   P +T   +           + 
Sbjct: 269 TILKLMRRRYLTNLYIDRVAKIKEVMPHACIGVDVIVGFPGETDEHFLETYHFLNELNIS 328

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +L ++  +    T+  +M
Sbjct: 329 YLHVFTYSERDNTVAAEM 346


>gi|227485374|ref|ZP_03915690.1| biotin synthase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236665|gb|EEI86680.1| biotin synthase [Anaerococcus lactolyticus ATCC 51172]
          Length = 341

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 63/196 (32%), Gaps = 23/196 (11%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N+HV RY++G+E  + S         +        +    GG     
Sbjct: 55  CKNDCYYCGIRKSNTHVNRYRLGKEEILNS--------ARFGYELGFRTFVMQGGEDPKF 106

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +  +L  I + +      ++ I  +       +++ +  AG +R  L  +S     
Sbjct: 107 SQDFMVDVLKSIKEAYP-----DVAITLSLGERSYEDYKAFFDAGADRYLLREESSNPAH 161

Query: 145 LRFLGRNHNASEAI----AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L   H     +      ++  + I  ++    +   P Q       +++       D
Sbjct: 162 YDKL---HPKEMKLKNRQECLYNLKKIGYQVGGGFMVESPYQKTEDLIADIRFLEELEPD 218

Query: 201 HLSLYQLTIEKGTLFY 216
            + +    +   T F 
Sbjct: 219 MVGIGPYLVSHDTPFM 234


>gi|170703218|ref|ZP_02894022.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia ambifaria IOP40-10]
 gi|170131868|gb|EDT00392.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia ambifaria IOP40-10]
          Length = 473

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 75/205 (36%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       + +       GT  YK 
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQ 386


>gi|206602446|gb|EDZ38927.1| tRNA-i(6)A37 modification enzyme (MiaB) [Leptospirillum sp. Group
           II '5-way CG']
          Length = 468

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 63/235 (26%), Gaps = 29/235 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVG----------QENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C K C YC       R               E+ +     E+  + Q            G
Sbjct: 180 CDKACAYC--VVPATRGPERSRPVADILREAEDLVSMGFREITLLGQNVNGYGQKGDTAG 237

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRIS 134
              P L+             +   +   + I     +P  +          +   +  + 
Sbjct: 238 ASFPELL------------QRLSDIPGLLRIRFTTSHPMDMSDALINVMATSSRVMPHLH 285

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQ 192
           L VQS  ++ L  + R +   +    I   R   P   ++ DLI     +T   +E  L 
Sbjct: 286 LPVQSGSDRMLERMQRGYTLDDYRRWIEKLRKKVPEAALTTDLIVGFCGETEEDFEKTLA 345

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
               +  D    +  +    T  +         +  E +      + Q     + 
Sbjct: 346 AVEEFRFDGAFAFIYSPRPSTPAHSWEDIPPREVSVERLERLQKKVEQQAMERNQ 400


>gi|299147882|ref|ZP_07040945.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23]
 gi|298514065|gb|EFI37951.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23]
          Length = 439

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDAIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVRKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|291166092|gb|EFE28138.1| 2-methylthioadenine synthetase [Filifactor alocis ATCC 35896]
          Length = 445

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 66/205 (32%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     +      ++    +      +  +       +     
Sbjct: 159 CDNLCTYC----IIPKLRGK---YRSRQKEDIVEESKKLAESGVKELIVIAQDTTKYGID 211

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           L   +++  +L  +     +       + + P  ++       + +   +    + +Q  
Sbjct: 212 LYGKKSLGELLKELDNVKGLHWIR--VLYSYPEDIDDEFILAVKNSKKIIPYFDMPIQHC 269

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYA 198
            +  L+ + R+ +  E    ++  R   P       LI   P +T  ++E   Q      
Sbjct: 270 SDTVLKRMNRHTSKQELYDKVNQIRTQIPNAVLRTTLITGFPGETREEFEELKQFVQEVK 329

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
            D L ++  + E+GT   KM    +
Sbjct: 330 FDRLGVFAFSQEEGTPAAKMKDQIE 354


>gi|260174153|ref|ZP_05760565.1| putative Fe-S oxidoreductase [Bacteroides sp. D2]
 gi|315922418|ref|ZP_07918658.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696293|gb|EFS33128.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 439

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + + +      G + I       G       +
Sbjct: 159 CDYFCSYC---TIPFARGRSRNGTIASMVEQARQAAA-EGGKEIVLTGVNIGDFGKTTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
           +   ++  + +   +      +IE  P+ +     +     ++ +    + +QS  ++ L
Sbjct: 215 SFFDLVKALDQVEGIERYRISSIE--PNLLTDAIIEFVSHSRSFMPHFHIPLQSGCDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + +   + + P   +  D+I     +T   +E   Q      V  L 
Sbjct: 273 QLMRRRYDTALFASKVRKIKEVMPDAFIGVDVIVGTRGETPEYFEQAYQFIDGLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|269956048|ref|YP_003325837.1| RNA modification enzyme, MiaB family [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304729|gb|ACZ30279.1| RNA modification enzyme, MiaB family [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 543

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     V   +  + +  +     +  ++ L    ++     G    S     
Sbjct: 178 CNNTCTFC----IVPHLRGKERD--RRPGEILAEVQALVDAGAVEVTLLGQNVNSYGVEF 231

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +    A +L    +   +          +P++   +      +    +  + + +QS  
Sbjct: 232 GDRGAFAKLLRACGQIAGLERVRF--TSPHPAAFTDDVIDAMAQTPNVMPSLHMPLQSGS 289

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R++ + + +  +   R   P   ++ DLI   P +T   +   L+   +   
Sbjct: 290 DRVLRAMRRSYRSEKFLGILDRVRAAMPDAAITTDLIVGFPGETEEDFAETLRVVEASRF 349

Query: 200 DHLSLYQLTIEKGTLFYKM 218
                +Q +   GT    M
Sbjct: 350 ASAFTFQYSPRPGTPAATM 368


>gi|189501125|ref|YP_001960595.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium phaeobacteroides BS1]
 gi|189496566|gb|ACE05114.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium phaeobacteroides BS1]
          Length = 546

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       + F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KHFVDEIEI---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      +V   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDADLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKLAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|89891221|ref|ZP_01202728.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BBFL7]
 gi|89516533|gb|EAS19193.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BBFL7]
          Length = 447

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 69/198 (34%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C  KC YC   +      + + + +++ +   + + +      + + +  G  G      
Sbjct: 165 CDYKCTYC---TIPLARGISRSDTLENVMENARLISEQGIKEIVLTGVNIGDYGKGEFGN 221

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLEE 142
            ++    LD +    TV+    + I    P+ ++    +      A V    + +Q+   
Sbjct: 222 KRHEHTFLDLVHALDTVNGIERLRISSIEPNLLKNETIEFVSGANAFVPHFHIPLQAGNN 281

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L  + R +N    +  +   + + P   +  D+I   P +T   +           + 
Sbjct: 282 ELLGKMKRRYNRELYVDRVTKIKEVMPDCCIGVDVIVGFPGETDDHFLDTYNFLSDLNIS 341

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +L ++  +    T    M
Sbjct: 342 YLHVFTYSERDNTEAATM 359


>gi|291527972|emb|CBK93558.1| radical SAM protein, TIGR01212 family [Eubacterium rectale M104/1]
          Length = 302

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 15/226 (6%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS---IFFGGGTPSLIEPQN 88
           C YC   S         +  + S   ++   ++    +S       +F   T +      
Sbjct: 41  CLYC---SAGGSGDFAADRSL-SIKEQLSAAKEKVASKSSCEHFIAYFQAFTNTYAPVDY 96

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSL 145
           +  I     +     S   ++I           +    +    +   + LG+Q++   +L
Sbjct: 97  LRRIF---YEAIEDPSVAVLSIGTRTDCFSTEIYDLLSELNEIKPVWVELGLQTIHRSTL 153

Query: 146 RFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             +   H    + I      R    ++   LI  LP +T       +       +  + L
Sbjct: 154 DAMN-THTCVEDFIIVADELRRRGIKVIAHLILGLPNETRGMMLESVDFVAKSGIFGVKL 212

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
             L + KGT    ++      L + +   D             +  
Sbjct: 213 QLLHVLKGTPLADIYIKHPFELFTLDDYCDFVVDCIERLPKDMVIH 258


>gi|225620134|ref|YP_002721391.1| 2-methylthioadenine synthetase [Brachyspira hyodysenteriae WA1]
 gi|225214953|gb|ACN83687.1| MiaB, 2-methylthioadenine synthetase [Brachyspira hyodysenteriae
           WA1]
          Length = 411

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 4/118 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P   + +              I L  QS  ++ L  + R +   E +  +   RN 
Sbjct: 207 LTSHPKDFDKDLADAIWNLNSLCKHIHLPFQSGSDRILNLMNRKYTKDEYVKKVSYLRNY 266

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                +S D+I     +T  +++  L    S   +   LY+ +  +G++ YK +   D
Sbjct: 267 ADDFPISTDIIVGYADETEDEYQETLNLLESIGFEEAYLYKYSEREGSIAYKKNVQYD 324


>gi|78188212|ref|YP_378550.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium chlorochromatii CaD3]
 gi|78170411|gb|ABB27507.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium chlorochromatii CaD3]
          Length = 547

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       + F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KHFVDEIEI---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      NV   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVALCQELIDRKLNVTWGINTRVTDIMRDADLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKFAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|82751179|ref|YP_416920.1| hypothetical protein SAB1448c [Staphylococcus aureus RF122]
 gi|82656710|emb|CAI81137.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 448

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLEMINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|313681436|ref|YP_004059174.1| SSU ribosomal protein s12p methylthiotransferase [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154296|gb|ADR32974.1| SSU ribosomal protein S12P methylthiotransferase [Sulfuricurvum
           kujiense DSM 16994]
          Length = 438

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 74/198 (37%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C +C   S   +             +    +  L         F    + S +  Q
Sbjct: 146 CNQQCSFCAIPSFKGKLNSRN------LESIAHEVETLVAKGYYDFSFVSQDSSSYLRDQ 199

Query: 88  NIALILDGIAKNWTVSSNV--EITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQ 143
           NI   L  + K   +   V     +   PS+  +   +    + V  N   + +Q + ++
Sbjct: 200 NIQDGLIHLIKRIELIDGVKSARILYLYPSTTSLKLIKAIGDSKVFHNYFDMPIQHINDE 259

Query: 144 SLRFLGRNHNASEAIA---AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            L+ + R    ++ +    A+    N F R S   I   P++T   +E   + + ++  D
Sbjct: 260 MLKIMKRGFGKAKTLELLGAMKALPNAFIRTS--FIVGHPQETEAMFEEMAEFSATFGFD 317

Query: 201 HLSLYQLTIEKGTLFYKM 218
            L+++  + E+GT  Y M
Sbjct: 318 RLNVFSYSDEEGTSAYTM 335


>gi|255514141|gb|EET90403.1| RNA modification enzyme, MiaB family [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 423

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 104 SNVEITIEANPSSVEVNNFQGYR---------KAGVNRISLGVQSLEEQSLRFLGRNHNA 154
           S +E   +     +      GY          +       L +QS  +  L+ + RN+  
Sbjct: 210 SRIEGFFKVRIGMLNPERLAGYINEFASALGNEKFYKFAHLPLQSGSDSVLKSMRRNYTV 269

Query: 155 SEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKG 212
            + +  + + R+  P +S   D+I   P +T   +   ++   S+  D  ++ +    + 
Sbjct: 270 DQYLEFVDVLRSYVPGISIETDMIVGYPTETDEDFTNSIEVLKSFRPDVTNISRFGARRH 329

Query: 213 TLFYKM 218
           T  +KM
Sbjct: 330 TAAHKM 335


>gi|197302959|ref|ZP_03168009.1| hypothetical protein RUMLAC_01686 [Ruminococcus lactaris ATCC
           29176]
 gi|197297954|gb|EDY32504.1| hypothetical protein RUMLAC_01686 [Ruminococcus lactaris ATCC
           29176]
          Length = 351

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 57/198 (28%), Gaps = 17/198 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +R+       +  S    +     +       +    GG  +    
Sbjct: 64  YCHNDCYYCG----IRKSNPNILRYRLSPSEILS-CCHIGYELGFRTFVLQGGEDNWFTT 118

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +A I+  I  ++      +  I  +       ++Q    AG +R  L  ++ +    R
Sbjct: 119 KRMAEIVAEIHSHFP-----DCAITLSIGERSRESYQALFDAGADRYLLRHETYDPVHYR 173

Query: 147 FLGRNH----NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              R H    +A      +   + I   +    +   P QT      +L          +
Sbjct: 174 ---RLHPDSLSAVHRRKCLWDLKEIGYHIGTGFMVGSPFQTAENLADDLLFLKELNPQMV 230

Query: 203 SLYQLTIEKGTLFYKMHK 220
            +        T F     
Sbjct: 231 GIGPFIPHHDTRFSHEPP 248


>gi|223935846|ref|ZP_03627761.1| Radical SAM domain protein [bacterium Ellin514]
 gi|223895447|gb|EEF61893.1| Radical SAM domain protein [bacterium Ellin514]
          Length = 439

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 23/198 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            ++  ++  L ++      TG R+I+           I   
Sbjct: 175 CPFTCNYCS--IAAVHQGAHRKRPVEQILRDIDA----TGSRNIN-----------ICDD 217

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNN----FQGYRKAGVNRISLGVQSLEEQ 143
           N+   +    + +T  +   +      +++ V       Q  R +G   ++LGV++   +
Sbjct: 218 NLCEDIRFADRLFTAMAGSPVRWGTQ-TTINVARHPGLLQKARASGCTLMALGVETFSVK 276

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + +  H   +         +        +I+ LP      ++  +    +  V   
Sbjct: 277 NLEDVNKTFHAVDKYAEGFRRIMDAGISPHALIIFGLPDDKPDTFKKTVDYLENLKVPVA 336

Query: 203 SLYQLTIEKGTLFYKMHK 220
            ++ LT   GT       
Sbjct: 337 QIFILTPYPGTPMGDRIH 354


>gi|260886785|ref|ZP_05898048.1| biotin synthase [Selenomonas sputigena ATCC 35185]
 gi|330839403|ref|YP_004413983.1| biotin synthase [Selenomonas sputigena ATCC 35185]
 gi|260863384|gb|EEX77884.1| biotin synthase [Selenomonas sputigena ATCC 35185]
 gi|329747167|gb|AEC00524.1| biotin synthase [Selenomonas sputigena ATCC 35185]
          Length = 337

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 61/193 (31%), Gaps = 19/193 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C + C YC  ++H   ++ G E +      E+    +      ++         S   + 
Sbjct: 66  CSEDCKYCAQSAH---HRTGVEEYAFLAQEEIIANARANEEAGVNRFSI---VTSGRALA 119

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---LEE 142
            +     LD       +   + I + A+   +    F+  R AGV      +++      
Sbjct: 120 GKEFDAALDCYRA---MRKKLHIDLCASHGILSREQFRALRAAGVTSYHHNIETSRRFFP 176

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +    +  +H   + I  I LA+     +    I  +  +T               ++ +
Sbjct: 177 E----ICTSHTYDDRIRTIRLAQGEGLNVCSGGIIGM-GETWEDRLDMAVSLAELGIESI 231

Query: 203 SLYQLTIEKGTLF 215
            +  L    GT  
Sbjct: 232 PINSLMAIPGTPL 244


>gi|212550847|ref|YP_002309164.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229890446|sp|B6YRD1|MIAB_AZOPC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|212549085|dbj|BAG83753.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 449

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLI- 84
           C   C YC     +  Y  G+E      S L E+  +++         I  G    S   
Sbjct: 166 CNNFCSYC-----IVPYTRGRERSRDPKSILNELHILKEQGYK---EVILLGQNVNSYFY 217

Query: 85  ---EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
                 +   +L+ +A N         T  ++P  +     +   K       I L +QS
Sbjct: 218 KNENITDFPHLLELVALNAPEMRIRFTT--SHPKDMGDETLRVIAKYNNICKHIHLPIQS 275

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
              + LR + R +     +  +   R I P +S   DL    P +T    +  L      
Sbjct: 276 GSSKILRAMNRKYTREWYLQRVTSIRKIVPEVSISTDLFCGFPSETEEDHKKTLSLMKEV 335

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
             D   +++ +    T   +
Sbjct: 336 GFDSAFMFKYSERPETYASR 355


>gi|253701831|ref|YP_003023020.1| radical SAM protein [Geobacter sp. M21]
 gi|251776681|gb|ACT19262.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 462

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 16/245 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-P 86
           C  +C YC ++      +  +     + + EM    + TG R    +       S+   P
Sbjct: 192 CANRCLYCTYHKV--EGEAWRIREPAAVVDEMLSAMRHTGAREFEFVD------SVFNEP 243

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
                +L        V + + ++   +P  +     +   +AG+  + +  +S  + +L 
Sbjct: 244 PGYLELLLEEILRKGVRARLSVS-SLSPKGLIAGQVRLMERAGMTSLVITPESASDSTLT 302

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            LG+    ++   A  +      R  +  +   P +        +           S Y 
Sbjct: 303 ALGKGFTEADVHRAAEILSGSGIRALWCFLVGGPSENEESVAKTVGFVNRL-PRKQSAYI 361

Query: 207 LT---IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT--SAHGLHAYEISNHSFLGA 261
            T   I  GT  +++  +  +V P +N+    +  T+ +T      +    +S+ S    
Sbjct: 362 TTGIRIYPGTGVHRLALEEGMVEPDQNLLHPAFYFTRELTPQKTIEMLQQGVSDPSRCIF 421

Query: 262 ESLHN 266
            S  N
Sbjct: 422 SSEAN 426


>gi|168060037|ref|XP_001782005.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666496|gb|EDQ53148.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 72/240 (30%), Gaps = 32/240 (13%)

Query: 28  CVKKCPYCDFNSHVRRYK---------VGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
           C+  C YC    H R +             +  +   + E+    + TG   I     G 
Sbjct: 208 CLGACTYCK-TKHARGHLGSYPLASLVDRVKGVVAEGVKEIWLSSEDTGAYGID---LGT 263

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGV--NRIS 134
             P+L+    +  +L                   NP  +   + +           + + 
Sbjct: 264 DLPTLLNA--LVDVLPKDRSCMLRIGM------TNPPYILKHLESIAAILNHPCVYSFLH 315

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           + VQS  +  L  + R +  S+          + P +    D+I   P +T   +E  + 
Sbjct: 316 VPVQSGSDNVLCAMNREYTVSDFKKVADTLLRLVPDLHLATDIICGFPGETSEDFEATMA 375

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
               Y    L + Q     GT   +M       +P+  V      LT    S +     E
Sbjct: 376 LVKEYKFSQLHISQFYPRPGTPAARM-----KRVPTAEVKKRSRELTTLFESFNPYSGME 430


>gi|23015799|ref|ZP_00055566.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 480

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+  P+        C  KC +C +   +   +V +     S + E++  RQ+        
Sbjct: 193 YIRHPYMAFYTGRGCKSKCSFCLWPQTIG-GRVYRARSAASVIEEVKLARQMFPEVREFF 251

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T       ++  + +       +        +AN   +     +  +  G+  +
Sbjct: 252 FDDDTFT------DDLERVEEIARGIGHLGVPWSCNAKAN---IPRKTLEVLKANGLRVL 302

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S  ++ L  + +                +   +    I  LP +T    +  L  
Sbjct: 303 VVGYESGVQEILNNIRKGLRIDIIKRFSQDCHELGIVLHGTFILGLPGETKETIKQTLAF 362

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       L +       GT  Y+ 
Sbjct: 363 AKEVNPRTLQVSMAAPYPGTELYEQ 387


>gi|270295900|ref|ZP_06202100.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
 gi|270273304|gb|EFA19166.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
          Length = 438

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        +   I S + +        G + I       G       +
Sbjct: 159 CDYYCSYC---TIPFARGRSRNGSIASMVEQ-ASQAAAEGGKEIVLTGVNIGDFGKSTGE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
               ++  + +   +      +IE  P+ +     +   ++   +    + +QS  ++ L
Sbjct: 215 TFFDLVKALDEVEGIERYRISSIE--PNLLTDEIIEYVSRSRRFMPHFHIPLQSGSDEVL 272

Query: 146 RFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +   + I   + + P   +  D+I     +T   +    +   S  V  L 
Sbjct: 273 KLMRRRYDTALFASKIKKIKEVMPDSFIGVDVIVGTRGETEEYFGQAYEFIKSLDVTQLH 332

Query: 204 LYQLTIEKGTL 214
           ++  +   GT 
Sbjct: 333 VFSYSERPGTQ 343


>gi|332826317|gb|EGJ99167.1| hypothetical protein HMPREF9455_00601 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 297

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 14/196 (7%)

Query: 28  CVKK-CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C     ++     ++ F +  L  +Q  +          +F  G  P ++  
Sbjct: 30  CSHHNCKFCSLYPDIKFKMSPKDEF-EHDLKIIQHYQP-----KARRLFLVGANPFVMSY 83

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLGVQSLEEQ 143
             +  I   I K   +     I + A  + +        +  R  G N I++G +S ++ 
Sbjct: 84  DRLLDIGIMIRKY--LPECKSIGMFARVTDITKKSVEELKNLRHLGFNGITVGTESGDDI 141

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRALSYAVDH 201
           +L ++ +  +A++ I  +              +  L                        
Sbjct: 142 TLSYMNKKTSAAQTIENLKKFEEAGIEYYVSYLTGLAGHGNGERNALATSDMFNKLNPYI 201

Query: 202 LSLYQLTIEKGTLFYK 217
           +S+  LT+   T    
Sbjct: 202 VSVVSLTVFPDTPLQN 217


>gi|327403999|ref|YP_004344837.1| MiaB-like tRNA modifying enzyme [Fluviicola taffensis DSM 16823]
 gi|327319507|gb|AEA43999.1| MiaB-like tRNA modifying enzyme [Fluviicola taffensis DSM 16823]
          Length = 448

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 32  C-PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  +C F +        +   I   + E + + + T  + +       G     E +N  
Sbjct: 169 CDYFCTFCTIPLARGKSRNASISDTVLEARKIAE-TNIKEVVLTGVNIGDFGQGEGENFF 227

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRF 147
            ++  + +   +      +IE  P+ +     Q   +     V    + +QS   + L+ 
Sbjct: 228 ELVKALDEVNGIDRYRISSIE--PNLLSDEIIQFTLENSKRFVPHFHIPLQSGSNRLLKA 285

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +     +  +   + + P   +  D+I   P +T  ++   +       V +L ++
Sbjct: 286 MRRKYLRELYVERVQHIKKLRPDCAIGVDVIVGFPGETDEEFIETMDFLKDLDVSYLHVF 345

Query: 206 QLTIEKGTLFYKM 218
             +    T   K+
Sbjct: 346 TYSERANTTAAKL 358


>gi|315635637|ref|ZP_07890900.1| Fe-S oxidoreductase [Arcobacter butzleri JV22]
 gi|315479934|gb|EFU70604.1| Fe-S oxidoreductase [Arcobacter butzleri JV22]
          Length = 446

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 80/236 (33%), Gaps = 18/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C   S   +         ++  + ++ ++ L     +   F    + S +   
Sbjct: 154 CNQACSFCAIPSFKGKLHS------RTLQSLVKEVKALVAKGYVDFSFVSQDSSSFLRDL 207

Query: 88  N----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
           +    + L+++ + K   + +   + +   PS+  ++       + V  N   + +Q + 
Sbjct: 208 DIKNGLELLIEEVEKIEGIKTARILYL--YPSTTTLSLIDKIADSKVFVNYFDMPLQHIT 265

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L+ + R     +    + H+       +    I   P +T   +E       ++  D
Sbjct: 266 PSMLKIMKRGKGVEQLNELMNHMKSKPNSFVRTTFIAGHPGETEDDFETLCSYVENFKFD 325

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAHGLHAYEI 253
             +++  + E+GT         D  L  E   +    +   TQ          +E+
Sbjct: 326 RANVFSYSDEEGTTAETRTDKVDQELIDERAEILGEIISQTTQESLENEVGKTFEV 381


>gi|119872823|ref|YP_930830.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674231|gb|ABL88487.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 348

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 61/179 (34%), Gaps = 13/179 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C +C F     R     E+++ +    ++ +  +     I  +   GG    +  +
Sbjct: 50  CVVGCSFCAFY----RPPGHPESYVYTVEEAVKRVLAIDAKYGIRQVLIQGGVNPDVGIE 105

Query: 88  NIALILDGIAKNWT------VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSL 140
               +   I           +S      +     +      +  R+AG++ +   G + L
Sbjct: 106 YFEALFRAIKTKAPHIAIHALSPLEIDYLSRRERATYREVLERLREAGMDSMPGGGGEIL 165

Query: 141 EEQSLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  + +  R  ++S  +  +  A  I    S  ++Y    +T++     + +     
Sbjct: 166 VDRVRKEVAPRKIDSSTWLRIMEEAHKIGIPTSATMMYGHV-ETISDIAEHMYKIAELQ 223


>gi|172060108|ref|YP_001807760.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia ambifaria MC40-6]
 gi|171992625|gb|ACB63544.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia ambifaria MC40-6]
          Length = 473

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 75/205 (36%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       + +       GT  YK 
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQ 386


>gi|312384872|gb|EFR29498.1| hypothetical protein AND_01451 [Anopheles darlingi]
          Length = 526

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 85/274 (31%), Gaps = 50/274 (18%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI------- 74
            P    C+  C YC       + K  + + +   + E+    Q      +  I       
Sbjct: 210 IPINSGCLNSCTYC-------KTKFARADLVSYPVQEIVERAQQVFEEGVCEIWLTSEDT 262

Query: 75  -FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---- 129
             +G    S + P+ +  +++       +     + +        + + +   K      
Sbjct: 263 GTYGRDIDSSL-PELLWKLVEV------IPEGCMMRLGMTNPPYILEHLEEMAKVLAHPR 315

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQ 186
             + + + VQS  +  L  + R +   E    +   R   P ++   D+I   P +T T 
Sbjct: 316 VYSFLHIPVQSGSDTILGEMKREYCVQEFERVVDFLREKVPGITIATDIICGFPGETETD 375

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           ++  +     Y    L + Q     GT   KM +     +P+  V      LT    S  
Sbjct: 376 FQGTVALCKKYEFPSLFINQFFPRPGTPAAKMER-----VPANEVKTRTKRLTDLFHSYE 430

Query: 247 GLHAY-----------EISNHSFLGAESLHNLNY 269
               Y           EIS+         HN  Y
Sbjct: 431 PYKKYTPGTIQTVLVTEISHDRK--HYVGHNKFY 462


>gi|302333252|gb|ADL23445.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 448

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|266621755|ref|ZP_06114690.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
           13479]
 gi|288866581|gb|EFC98879.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
           13479]
          Length = 320

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 66/202 (32%), Gaps = 14/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC            +   ++    E++ +        + +   G    S     
Sbjct: 36  CNQFCSYC---IIPYTRGRVRSRRMEDVRAEVERLVAGGYKEIVLT---GIHLSSYGVDF 89

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +    +LD I     V   + I +    P  +     +             L +QS  
Sbjct: 90  REEERRTLLDLIVYLHEVDGLLRIRLGSLEPRIITKEFAEALAALPKVCPHFHLSLQSGC 149

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + +L  + R++  ++ +    + R  F    ++ D+I   P +T  +++       +   
Sbjct: 150 DATLARMNRHYTTADYLERCDILRAAFDNPAITTDVIVGFPGETGEEFQTTEAFLRTVHF 209

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
             + +++ +  +GT    M   
Sbjct: 210 YEMHVFKYSRREGTRAAVMPDQ 231


>gi|218282655|ref|ZP_03488870.1| hypothetical protein EUBIFOR_01456 [Eubacterium biforme DSM 3989]
 gi|218216418|gb|EEC89956.1| hypothetical protein EUBIFOR_01456 [Eubacterium biforme DSM 3989]
          Length = 347

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 62/196 (31%), Gaps = 18/196 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     NS+  RY + +E+ +       +            +    GG    
Sbjct: 64  YCRNDCFYCGIRKSNSNCDRYILDEEDILNCCKEGYKL--------GFRTFVLQGG---- 111

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                              S      I  +    + + ++ +  AG +R  L  ++  + 
Sbjct: 112 --EGIYKRDFVTNIVQKIRSEYPNCAITLSLGEEDRDTYKAWFDAGADRYLLRHETANKS 169

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  +N +    +  +   + I  ++    +   P QT     M+L+   ++  D  
Sbjct: 170 HYEKLHPKNMSFDHRMQCLKDLKEIGYQVGCGFMVGSPYQTSETLAMDLKFIETFKPDMC 229

Query: 203 SLYQLTIEKGTLFYKM 218
            +     +K T F  M
Sbjct: 230 GIGPFISQKDTPFKNM 245


>gi|145295854|ref|YP_001138675.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium glutamicum R]
 gi|229890500|sp|A4QEV7|MIAB_CORGB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|140845774|dbj|BAF54773.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 526

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + ++ +    A+
Sbjct: 265 TSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAK 324

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
                ++ D+I   P +T   ++  L             +Q +   GT 
Sbjct: 325 IPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTP 373


>gi|81760370|sp|Q8NP67|MIAB_CORGL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|21324719|dbj|BAB99342.1| 2-methylthioadenine synthetase [Corynebacterium glutamicum ATCC
           13032]
          Length = 522

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + ++ +    A+
Sbjct: 261 TSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAK 320

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
                ++ D+I   P +T   ++  L             +Q +   GT 
Sbjct: 321 IPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTP 369


>gi|19553154|ref|NP_601156.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium glutamicum ATCC 13032]
 gi|62390789|ref|YP_226191.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326127|emb|CAF20290.1| TRNA METHYLTHIOTRANSFERASE [Corynebacterium glutamicum ATCC 13032]
          Length = 526

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + ++ +    A+
Sbjct: 265 TSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAK 324

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
                ++ D+I   P +T   ++  L             +Q +   GT 
Sbjct: 325 IPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTP 373


>gi|325280921|ref|YP_004253463.1| Radical SAM domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324312730|gb|ADY33283.1| Radical SAM domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 360

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C+K C YC     NS  +RY++  E  +++    +   R   G   +             
Sbjct: 59  CIKDCLYCGIRKSNSQAQRYELNDEEIVEA---AIFAYRNHYGSV-VLQGGERH------ 108

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +P  I  I   + +   +S+   + I  +      + ++ +  AG +R  L +++  E  
Sbjct: 109 DPAFILRIERLVREIKHLSNQR-LGITLSLGEQTEDTYRRWFDAGAHRYLLRIETSNESL 167

Query: 145 LRFL---GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            R +   G+ H+    +  I   +    +    ++  LP QT      +L    S  +D 
Sbjct: 168 YRKIHPAGQLHDFHTRLECIRSLQRCGYQTGTGVMIGLPFQTTGDLADDLLFLKSMDIDM 227

Query: 202 LSLYQLTIEKGTLFYKMH 219
           + +      + T  ++  
Sbjct: 228 VGMGPYLEHRDTPLWRYR 245


>gi|148263366|ref|YP_001230072.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146396866|gb|ABQ25499.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 600

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 3/113 (2%)

Query: 108 ITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSLRFLGRNHNASEAIAAIH-LA 164
              E     +  +N         +  R  +GVQS   ++L  +GR  N  +    +  L 
Sbjct: 287 FHFEIAADLLTDDNLAMLATVPPDTFRFEIGVQSGGTETLARVGRKSNLEKLFGNVEKLC 346

Query: 165 RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
           R+    +  DL+  LP +    +   LQR +  +  H+ +  L + KG+   +
Sbjct: 347 RDTNVTIHLDLVAGLPYEDFDGFLDSLQRLIDVSPHHIQVEPLKVLKGSAMRR 399


>gi|254797123|ref|YP_003081961.1| hypothetical protein NRI_0751 [Neorickettsia risticii str.
           Illinois]
 gi|254590369|gb|ACT69731.1| conserved hypothetical protein [Neorickettsia risticii str.
           Illinois]
          Length = 416

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 7/197 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     + R K    + I+      + +        ++ +        L    
Sbjct: 140 CDHDCTFCA--ITLARGKNRSSDAIKIVSEVRKMVAFGINEVVLTGVDITDYGKDLFGKP 197

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSL 145
            +  +L  I  +      + ++   + S +  +  + +      +  + L +QS +   L
Sbjct: 198 ALVYLLKKILNDVPELKRLRLS-SVDVSELSDDFIELFATEARLMPHLHLSIQSGDSIIL 256

Query: 146 RFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R H   + +      LA         D+I   P ++   +    +     A+ +L 
Sbjct: 257 KRMKRRHTPEQVVEFHSKILAVRPETGFGADIIVGFPTESEEMFHNSYELIKRLAIPYLH 316

Query: 204 LYQLTIEKGTLFYKMHK 220
           ++  + +KGT    M +
Sbjct: 317 VFPFSPKKGTKAALMPQ 333


>gi|308801795|ref|XP_003078211.1| CDK5 activator-binding protein (ISS) [Ostreococcus tauri]
 gi|116056662|emb|CAL52951.1| CDK5 activator-binding protein (ISS) [Ostreococcus tauri]
          Length = 558

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C+  C YC      +  +    ++ I + ++ ++            S    G     +  
Sbjct: 176 CLGACTYC----KTKHARGDLGSYEISALVSRVEQAISEGVSEVWLSSEDTGAYGIDLGT 231

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNF----QGYRKAGVNRI-SLGVQSLE 141
             +A +   I        +V + +        + +     +  R   V     + VQS  
Sbjct: 232 D-VAALFRAITAVLPTDGSVMLRLGMTNPPYILAHLDAVAEAMRHPAVYAWMHIPVQSGS 290

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
              L  + R +   E                ++ D+I   P +T  QW   +Q    Y  
Sbjct: 291 NAVLEAMKREYTVEEFRTVCDTLLEAVPGMVIATDVICGFPGETDEQWRETMQLIEEYKF 350

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             + + Q     GT   +M
Sbjct: 351 PEVHISQFYPRPGTPAARM 369


>gi|307297843|ref|ZP_07577649.1| RNA modification enzyme, MiaB family [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306917103|gb|EFN47485.1| RNA modification enzyme, MiaB family [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 434

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 25  WPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPS 82
              C K C YC            +   +   L+E + +  + G R I+ +          
Sbjct: 149 IFGCNKFCSYC---IVPYTRGREKSRNMDDILSEARELA-VNGYREITYLGQNVDSYGKD 204

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA-GVNR-ISLGVQSL 140
           L +  ++A ++    +   +       + + P             +  V+R I L VQS 
Sbjct: 205 LEDGSSLAKLIRETIEINGIERIWF--LTSYPRDFSDELIDVIASSEKVSRAIHLPVQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R +     +  +   +N      +S DLI   P +T  ++E  +       
Sbjct: 263 SNRILKDMNRGYTREYYLDLLGRVKNRIQGATLSTDLIIGFPGETEKEYEETVSLVKEVR 322

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            + ++L   +  +GTL  K  
Sbjct: 323 FERVNLAMYSPREGTLSAKKM 343


>gi|206901646|ref|YP_002251045.1| hypothetical protein DICTH_1216 [Dictyoglomus thermophilum H-6-12]
 gi|206740749|gb|ACI19807.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
          Length = 417

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 17/214 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C   C YC     +  Y  G+E   +     ++  ++L        I  G    +     
Sbjct: 130 CNNFCSYC-----IVPYLRGRERS-KPLDKVVEEAKKLVESGFKEIILTGIRLGTYGSDW 183

Query: 87  ---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                +  +L  + +   ++     +IE  P  +   N               + +QS +
Sbjct: 184 GDKDALYKLLLNLFEIDGLAKIRLSSIE--PMDIT-ENLIELADHPKLCKHWHIPLQSGD 240

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R ++       I+  R   P ++   D+I   P+++   +      A     
Sbjct: 241 DDILKKMNRRYDTKYFENIIYKLREKVPNIAITTDIIVGYPEESEENFNNTYLFAEKIGF 300

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
             + ++  +    T  Y +      ++      +
Sbjct: 301 MRIHVFPFSPRPFTKAYDLKPLPYEIITKRKEKL 334


>gi|195443590|ref|XP_002069485.1| GK11551 [Drosophila willistoni]
 gi|194165570|gb|EDW80471.1| GK11551 [Drosophila willistoni]
          Length = 576

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 4/114 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P     +  +  R       ++ L  QS   Q L  + R +     +  +   R I
Sbjct: 347 TSPHPKDFSDDVLRIIRDYPNVCKQLHLPAQSGNSQVLARMRRGYTREAYLELVEHIRKI 406

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            P +    D I     +T  ++E  +        +   L+  ++ + T  ++  
Sbjct: 407 LPHVGLSSDFICGFCGETDEEFEDTISLIQKVRYNVAYLFAYSMREKTTAHRRF 460


>gi|193211932|ref|YP_001997885.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobaculum parvum NCIB 8327]
 gi|193085409|gb|ACF10685.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobaculum parvum NCIB 8327]
          Length = 546

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       ++F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KNFVDEIEI---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      +V   I    + +  + +    YRKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDEDLLPFYRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIDENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|171316947|ref|ZP_02906154.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia ambifaria MEX-5]
 gi|171097871|gb|EDT42691.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia ambifaria MEX-5]
          Length = 473

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T       ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIRKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       + +       GT  YK 
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQ 386


>gi|145593989|ref|YP_001158286.1| RNA modification protein [Salinispora tropica CNB-440]
 gi|229890661|sp|A4X4V8|MIAB_SALTO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|145303326|gb|ABP53908.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salinispora tropica
           CNB-440]
          Length = 499

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 61/197 (30%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C +C     V   +  +++  +     +  +R L     +     G    S  IE 
Sbjct: 164 CNNTCTFC----IVPALRGKEKD--RRPGEILSEVRSLVDEGVLEVTLLGQNVNSYGIEF 217

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +       +     +     +     +P     +      +       + + +QS  + 
Sbjct: 218 GDRYAFGKLLRACGDIDGLERVRFTSPHPKDFTDDVIAAMAETPNVCPSLHMPLQSGSDD 277

Query: 144 SLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R++ +   +  I    A      ++ D+I   P +T   +E  L    +     
Sbjct: 278 MLRAMRRSYRSERYLGIIEKVRAAMPDAAITTDIIVGFPGETEADFERTLDVVRAARFSS 337

Query: 202 LSLYQLTIEKGTLFYKM 218
              +Q +   GT    M
Sbjct: 338 AFTFQYSKRPGTPAATM 354


>gi|78224687|ref|YP_386434.1| cobalamin B12-binding/radical SAM family protein [Geobacter
           metallireducens GS-15]
 gi|78195942|gb|ABB33709.1| Cobalamin B12-binding/Radical SAM [Geobacter metallireducens GS-15]
          Length = 677

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 17/198 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C YC   S + R +        S    ++ M +L G      +       +     
Sbjct: 209 CPHRCVYCS-ESVMWRRRTRT----FSIPRLIREMEELHGRFGAECLVLAYDQFTADRRF 263

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +    ++D                 +   S++       R+AG   +  G+ S   ++
Sbjct: 264 VEEFCNRVIDARLNRVP------WYCISRLDSLDRPLLDLMREAGCESMCYGIDSGSRRT 317

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--DHL 202
           L F+G+  +       +          +   +   P++     +  L  AL   V  +  
Sbjct: 318 LAFIGKEIDEGILYQRVRETTEAGMVPTLSFVIGFPEEEREDIDQTLFLALKAGVQGNSA 377

Query: 203 SLYQL-TIEKGTLFYKMH 219
            L QL T+  GT  ++ +
Sbjct: 378 PLVQLPTVLAGTELHRRY 395


>gi|325294065|ref|YP_004279929.1| methylase protein [Agrobacterium sp. H13-3]
 gi|325061918|gb|ADY65609.1| putative methylase protein [Agrobacterium sp. H13-3]
          Length = 424

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      ++  R+L        +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVEQARRLVESGYCEIVLTGVDATSYGADL 200

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             +         +L  + +   +  +   +IEA+   ++           +  + L +Q 
Sbjct: 201 PGEPSLGLLAKTLLKQVPEILRLRLSSIDSIEADHHLMD---LIAGEARFMPHLHLSLQH 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H  ++AI   H  R++ P +    D+I   P +    +E     A   
Sbjct: 258 GDDMILKRMKRRHLRADAIRFCHEVRSLRPDIAFGADMIAGFPTENEEMFENAATLAEEC 317

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            +  L ++  +   GT   +M +
Sbjct: 318 GISSLHVFPYSPRAGTPAARMPQ 340


>gi|312863784|ref|ZP_07724022.1| radical SAM protein, TIGR01212 family [Streptococcus vestibularis
           F0396]
 gi|311101320|gb|EFQ59525.1| radical SAM protein, TIGR01212 family [Streptococcus vestibularis
           F0396]
          Length = 314

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYHEIDFMHRKWPEVQKYLVYFQNFTNT---HAPLEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +  +      +        + LG+Q+  E++   +
Sbjct: 100 IKERYEQAINEPGVVGINIGTRPDCLPDDVIDYLAELTERMHVTVELGLQTTYEETSELI 159

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L+
Sbjct: 160 NRAHSYDLYVETVKRVRERAPKAEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLH 219

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L +   T   + + +G L L S+  
Sbjct: 220 LLHLMTNTRMQRDYHEGRLKLLSQEE 245


>gi|300122464|emb|CBK23034.2| unnamed protein product [Blastocystis hominis]
          Length = 465

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 39/271 (14%)

Query: 18  SLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMR----QLTGPRSIS 72
            + +      C+  C +C      R  +    ++ I   +  +   +          S  
Sbjct: 176 PISL-----GCLGACTFC----QTRLARGKLWSYPIDEIIKRVHAAKVNGISEIWLTSED 226

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY-----RK 127
           +  +G    S +       +LD I       SNV + I            +        K
Sbjct: 227 TGAYGMDRNSSL-----MELLDRIRSEVE-DSNVMVKIGMTNPPFLKPMLEPLSTILNHK 280

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMT 185
              + + + VQS  +  L+ + R +  S+            P +  S D+I   P ++  
Sbjct: 281 NFYSYLHIPVQSGSDAVLKRMNRKYQVSDFREICSFLSQHVPGITLSTDIIVGFPYESAE 340

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA 245
                +Q      ++ +   +      TL  +        LP + V   +  L+    + 
Sbjct: 341 DHAKTMQLLRDLNLNIVHYSRYYPRPHTLAAR-----YEQLPIDVVKSRVKELSDWFKAL 395

Query: 246 HGLHAY-------EISNHSFLGAESLHNLNY 269
           H             +SN         H  NY
Sbjct: 396 HPYDELVGKEMDVWVSNEKTGDYRCCHTKNY 426


>gi|289642902|ref|ZP_06475037.1| biotin synthase [Frankia symbiont of Datisca glomerata]
 gi|289507285|gb|EFD28249.1| biotin synthase [Frankia symbiont of Datisca glomerata]
          Length = 373

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F+S VR   +     + S +   +  R+             G     
Sbjct: 110 CPEDCHFCSQSGKFDSPVRSVWLD----VPSLVEAAKATRETGATEFCIVAAVRGPD--- 162

Query: 84  IEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                   ++  +      + + V+I I  +   +           GV+R +  +++   
Sbjct: 163 ------KRLMSQVRAGVEAIRAAVDINIACSLGMLTQEQVDELAALGVHRYNHNLETARS 216

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
              + +   H+  E      + R     +    I  +  +T+ Q      +  +   D +
Sbjct: 217 HFPQVVT-THSWQERWDTCEMVRAAGMELCCGAIIGV-GETLEQRAELAGQLAALEPDEV 274

Query: 203 SLYQLTIEKGTLFYKM 218
            L  L    GT F  +
Sbjct: 275 PLNFLNPRPGTPFADL 290


>gi|303238723|ref|ZP_07325256.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
 gi|302593842|gb|EFL63557.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
          Length = 582

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 63/217 (29%), Gaps = 22/217 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG--PRSISSIFFGGGTPSLIE 85
           C   C YC  ++      +  E      L  ++   ++     R+ +             
Sbjct: 188 CPFDCSYCLSSTFKGVRYLSMERVKSDILAFIKAGIKMVKFVDRTFNC------------ 235

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQ 143
             N+      ++     + +     EA     +        KA  G+ +  +G+Q+   +
Sbjct: 236 --NLERAKQILSFVIDNAGSTHFHFEAAADLFDNEMMDILSKAPTGLIQFEIGIQTTNSK 293

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + R    +E    +     +    +  DLI  LP +    +              L
Sbjct: 294 TLIAVNRKTRLNEVFFNVQKLNRLGNVHLHLDLIVGLPYEDYESFRKSFNDVYELGPQQL 353

Query: 203 SLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLY 236
            +  L + KG+        +       P   V    Y
Sbjct: 354 QVGFLKLLKGSRIRAESDKYGYNFRNYPPYEVLSSNY 390


>gi|326791250|ref|YP_004309071.1| ribosomal protein S12 methylthiotransferase rimO [Clostridium
           lentocellum DSM 5427]
 gi|326542014|gb|ADZ83873.1| Ribosomal protein S12 methylthiotransferase rimO [Clostridium
           lentocellum DSM 5427]
          Length = 448

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C K C YC     + + +     +    + +++   +      +S I       +     
Sbjct: 158 CDKHCTYC----IIPKLRGK---YRSRQMDKIKAEVEKLAADGVSEIILVAQDTTEYGRD 210

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +E  ++A +L  + +   +       +   P S+     +  +        + + +Q   
Sbjct: 211 LENASLAKLLHELGEIEGIEWIR--VLYCYPESITDELIEEIKTNPKVCKYLDIPIQHAS 268

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R  +  +    +   R   P ++    LI   P +T   +++          
Sbjct: 269 TAILKRMARKSSLEQLKERLGKLRQEIPGIALRTTLIVGFPGETEEDFQILYDFVKEMRF 328

Query: 200 DHLSLYQLTIEKGTL 214
           D L ++  + E+GT 
Sbjct: 329 DRLGVFTYSKEEGTP 343


>gi|239906359|ref|YP_002953100.1| tRNA-i(6)A37 modification enzyme MiaB family protein [Desulfovibrio
           magneticus RS-1]
 gi|239796225|dbj|BAH75214.1| tRNA-i(6)A37 modification enzyme MiaB family protein [Desulfovibrio
           magneticus RS-1]
          Length = 446

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 6/134 (4%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
            A +LD +A    +      T  ++P  +     + +         + L VQS  +  LR
Sbjct: 215 FAKLLDAVAAVPGIERIRFTT--SHPKDLSDEVIERFAALPQLCPALHLPVQSGSDDILR 272

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            +GR ++ +  +  +   R   P ++   D I   P +T   +E  L+       D    
Sbjct: 273 RMGRRYDTAAYLTLVEKLRRACPDIALTSDFIVGFPGETRADFEATLELVRKVGFDSGFS 332

Query: 205 YQLTIEKGTLFYKM 218
           +  +   GT   K+
Sbjct: 333 FMYSDRPGTASEKL 346


>gi|229890682|sp|Q17YC7|MIAB_HELAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 439

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 149 CDKKCTYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 202

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + N + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 203 SSEHAKVNFSDLLDKLSEIPGIERIRF--TSPHPLHMNDEFLERFAKNPKVCKSIHMPLQ 260

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +N    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 261 SGSSAVLKMMRRGYNKEWFLNRVEKLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 320

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 321 VCFDTLYSFIYSPRPFT 337


>gi|167767374|ref|ZP_02439427.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
 gi|167711349|gb|EDS21928.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
          Length = 440

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +  Y  G+    +     ++ +  LT       +  G    S    +
Sbjct: 160 CNQFCSYC-----IIPYARGRVRS-RKMEEVLEEITNLTKHGCQEFVITGIHVTSYGKDL 213

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEE 142
               +  +L+ IAK   V      ++E  P  +  +      K         L +QS  +
Sbjct: 214 GDVTLIDLLEEIAKIPEVKRIRLGSLE--PGFITKDTLDRLSKMESFCPHFHLSLQSGCD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +   +        R  F  P ++ D+I   P +T  ++E   +      + 
Sbjct: 272 SVLKRMNRKYTTQDIREKCKAIREHFQYPALTTDIIVGFPGETEEEFEETRKFLEEIDLY 331

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + +++ +I KGT    M
Sbjct: 332 EMHVFKYSIRKGTKAADM 349


>gi|109947120|ref|YP_664348.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           acinonychis str. Sheeba]
 gi|109714341|emb|CAJ99349.1| unnamed protein product [Helicobacter acinonychis str. Sheeba]
          Length = 427

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 137 CDKKCTYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 190

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + N + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 191 SSEHAKVNFSDLLDKLSEIPGIERIRF--TSPHPLHMNDEFLERFAKNPKVCKSIHMPLQ 248

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +N    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 249 SGSSAVLKMMRRGYNKEWFLNRVEKLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 308

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 309 VCFDTLYSFIYSPRPFT 325


>gi|150016275|ref|YP_001308529.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902740|gb|ABR33573.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 552

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 22/225 (9%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC    SH  R+ +  +  ++  +  +    +L     +  +       S    
Sbjct: 183 CPFNCKYCLSSTSHGVRF-LDIDRVLKDLMYFINKEVRL-----VKFVDRTFNCNSKFAM 236

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
                +++         +N +   E +   ++    +   KA  G  R  +GVQ+  ++ 
Sbjct: 237 AIWDFLINQ-------DTNTQFHFEISADILKPQEIELLSKAPKGRFRFEVGVQTTNDEV 289

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMS--FDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R  N S+    + L       +    DLI  LP +    ++           + +
Sbjct: 290 LRNINRFVNFSDIKEKV-LEIEALRNIDQHLDLIAGLPGEDYESFKKSFNDMYEIKPEEI 348

Query: 203 SLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
            L  L + KG+   +    +       P   +        + +  
Sbjct: 349 QLGFLKLLKGSSMREDADKYGMEYSPYPPYEILKTDKISYEELLK 393


>gi|115351104|ref|YP_772943.1| radical SAM domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115281092|gb|ABI86609.1| Radical SAM domain protein [Burkholderia ambifaria AMMD]
          Length = 473

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 75/205 (36%), Gaps = 18/205 (8%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKM 218
           A       + +       GT  YK 
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQ 386


>gi|283954557|ref|ZP_06372076.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793961|gb|EFC32711.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 417

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 73/193 (37%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   S   + +   E   ++ L +++ +        + +    G     L   
Sbjct: 143 CDFACSYCIIPSVRGKSRSVDE---KTLLKQVEILGANGYSEIVLTGTNIGSYG--LKNG 197

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
             +  +L  + +   +      ++E  P+ ++ +  +   +A + R + + +Q   E+ L
Sbjct: 198 TTLGKLLQKMGQISGIKRIRLGSLE--PAQIDESFLEILDEAWLERHLHIALQHTSEKML 255

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R + R  +    +   ++  +    +  D I   P +++  WE  L+    +++ H+  +
Sbjct: 256 RIMRRRSHTDNDLRLFNIIASKGYALGTDFIVGHPGESVEIWEEALKNFKEFSLTHIHAF 315

Query: 206 QLTIEKGTLFYKM 218
             +    T    M
Sbjct: 316 IFSPRNNTHSATM 328


>gi|164687636|ref|ZP_02211664.1| hypothetical protein CLOBAR_01278 [Clostridium bartlettii DSM
           16795]
 gi|164603410|gb|EDQ96875.1| hypothetical protein CLOBAR_01278 [Clostridium bartlettii DSM
           16795]
          Length = 595

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 10/158 (6%)

Query: 108 ITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     ++ +  +  +    G+ +  +GVQ+  +++L  +GR  +  +    +    
Sbjct: 258 YHFEVTAHLLDDDMLEFLKDCKEGLFQFEIGVQTTNQEALDAVGRRDDFEKLSYVVKTIE 317

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
           +        DLI  LP +    +E          ++ L L  L + KGT      ++ + 
Sbjct: 318 SYQNIHQHLDLIAGLPYEGYDSFEKSFNDVFGLQIEQLQLGFLKMIKGTGMRARAEEFEY 377

Query: 225 ---VLPSENVAVDLYNLTQSITS----AHGLHAYEISN 255
                    V  + +     I         L  Y  SN
Sbjct: 378 EYKDYAPYEVLSNKFISYDEILKLKDIEDILERYYNSN 415


>gi|25026645|ref|NP_736699.1| biotin synthase [Corynebacterium efficiens YS-314]
 gi|259508223|ref|ZP_05751123.1| biotin synthase [Corynebacterium efficiens YS-314]
 gi|81750785|sp|Q8FUD1|BIOB_COREF RecName: Full=Biotin synthase
 gi|23491924|dbj|BAC16899.1| biotin synthase [Corynebacterium efficiens YS-314]
 gi|259164158|gb|EEW48712.1| biotin synthase [Corynebacterium efficiens YS-314]
          Length = 334

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 24/201 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +  E  +++     +   +             G  P  
Sbjct: 70  CPEDCHFCSQSGLFESPVRSVWLDIEQLVEAA----KQTAKSGATEFCIVAAVKG--P-- 121

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
            + + +  + + +A    +   V+I + A+  S+         +AGV+R +  +++    
Sbjct: 122 -DDKLMNQLEEAVAA---IQREVDIEVAASVGSLTPEQVTRLARAGVHRYNHNLETARSF 177

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             Q +      H   E    + L       +    I  +  +T+ Q      +       
Sbjct: 178 FPQVVT----THTWEERRETLRLVAEAGMEVCSGGILGM-GETLEQRAEFAVQLAELNPT 232

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            + +  L    GT F      
Sbjct: 233 EVPINFLDPRPGTPFADRPLM 253


>gi|317497456|ref|ZP_07955776.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895242|gb|EFV17404.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 440

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +  Y  G+    +     ++ +  LT       +  G    S    +
Sbjct: 160 CNQFCSYC-----IIPYARGRVRS-RKMEEVLEEITNLTKHGCQEFVITGIHVTSYGKDL 213

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEE 142
               +  +L+ IAK   V      ++E  P  +  +      K         L +QS  +
Sbjct: 214 GDVTLTDLLEEIAKIPEVKRIRLGSLE--PGFITKDTLDRLSKMESFCPHFHLSLQSGCD 271

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +   +        R  F  P ++ D+I   P +T  ++E   +      + 
Sbjct: 272 SVLKRMNRKYTTQDIREKCKAIREHFQYPALTTDIIVGFPGETEEEFEETRKFLEEIDLY 331

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + +++ +I KGT    M
Sbjct: 332 EMHVFKYSIRKGTKAADM 349


>gi|257784586|ref|YP_003179803.1| MiaB-like tRNA modifying enzyme YliG [Atopobium parvulum DSM 20469]
 gi|257473093|gb|ACV51212.1| MiaB-like tRNA modifying enzyme YliG [Atopobium parvulum DSM 20469]
          Length = 468

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 19/204 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG---GGTPSLI 84
           C + C +C        Y       I      +Q +++L        I  G   G   S +
Sbjct: 162 CDRFCAFCAIPYIRGHYHSRPAEEI------LQEVKELMDGGVREVILIGQDTGIWGSDM 215

Query: 85  EPQN------IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                     +A ++  +A+           +   P  +        R     +  I + 
Sbjct: 216 PDTEDGQTPTLAKLMQKVAEVVRSYKGWIRVLYLQPEGMTDELISTIRDTPEVLPYIDIP 275

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDL--IYALPKQTMTQWEMELQRA 194
           +Q   E+ L+ +GR+ +  E        R+  P M      +   P +T  + +      
Sbjct: 276 IQHCNERILKRMGRSGSIQELRKLFDRLRSEIPGMVLRTTGMCGFPGETDEESDELYDFI 335

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                D+ S++  + E+GTL  KM
Sbjct: 336 QEQEFDYTSVFTYSPEEGTLGAKM 359


>gi|257467289|ref|ZP_05631600.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918418|ref|ZP_07914658.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692293|gb|EFS29128.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 244

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 70/203 (34%), Gaps = 7/203 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C             +   Q    ++Q + +      + + +F   T +  +   +  
Sbjct: 42  CIFCSEEGSGEFSGDRHKKIYQQIEDQLQLISKKFPSGKVIA-YFQNFTNTYADISYLKK 100

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQSLRFL 148
           + +    +  V     + I   P  +  +  Q   +        I LG+Q++ E+   F 
Sbjct: 101 VYEEALSHPRVMG---LAIATRPDCLGEDVLQLLDEMNQKTFLWIELGLQTVNEEVATFF 157

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +  S    A    +    R    ++  LPK+           A       + ++ L 
Sbjct: 158 HRGYPLSVYTKACDDLKKYRIRFVTHILLGLPKEKEEDGLKTALYAQECGTWGIKIHCLY 217

Query: 209 IEKGTLFYKMHKDGDLVLPSENV 231
           ++K T   +++K+ ++ +  ++ 
Sbjct: 218 VQKNTYLEQLYKNHEIKIQKKDE 240


>gi|291612929|ref|YP_003523086.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sideroxydans
           lithotrophicus ES-1]
 gi|291583041|gb|ADE10699.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sideroxydans
           lithotrophicus ES-1]
          Length = 446

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 10/197 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C K C +C       R +     +          + Q  G  ++   ++    G     +
Sbjct: 160 CSKYCTFC--VVPYTRGEEMSRPYADVMREVESLIAQGVGEITLLGQNVNAYQGETDDGD 217

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
             + A +L  +A    V      T  ++P  +       Y       + + L VQS  ++
Sbjct: 218 TVDFAFLLQTVAALPGVQRLRYTT--SHPREMSQRLIDLYATTPKLASHLHLPVQSGSDR 275

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R + A E  + +   R   P +S   D I   P +T   +E  ++     A D 
Sbjct: 276 ILAAMKRGYTALEYKSIVRKLRAARPEISITSDFIVGFPGETDADFEATMKLIDDVAFDA 335

Query: 202 LSLYQLTIEKGTLFYKM 218
              +  +   GT   +M
Sbjct: 336 SFSFIFSARPGTPAAEM 352


>gi|255009413|ref|ZP_05281539.1| putative oxidoreductase [Bacteroides fragilis 3_1_12]
 gi|313147172|ref|ZP_07809365.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135939|gb|EFR53299.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 432

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 65/191 (34%), Gaps = 8/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHVSRPMEEILDEVRYLVSNGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ +++   V         A P+    + F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIERVSEIPGVEWIRLHY--AYPAHFPEDLFRVMRERDNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+    +    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 QRMRRHVTKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKVRFDRMG 321

Query: 204 LYQLTIEKGTL 214
            +  + E+GT 
Sbjct: 322 AFAYSEEEGTY 332


>gi|257125083|ref|YP_003163197.1| radical SAM protein [Leptotrichia buccalis C-1013-b]
 gi|257049022|gb|ACV38206.1| Radical SAM domain protein [Leptotrichia buccalis C-1013-b]
          Length = 440

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 23/196 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE-- 85
           C  KC YC   S  + Y    +      +  + ++             F    P+ +   
Sbjct: 177 CPNKCSYC---SITKMYSGKNQ------IKSIDYVINEIKTNKPKKWIF--LDPNFLGNR 225

Query: 86  --PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
                +   L  +   WT S+ + I         +    Q  +++G   + +G++S  ++
Sbjct: 226 NYAIQLMEELKKLKIKWTASATINIG-------NDKKILQLMKESGCIGLVIGLESFVQE 278

Query: 144 SLRFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +L  + +  +N +E    +   ++    +   L+  +   T+              VD  
Sbjct: 279 NLDGVNKKFNNVAEYKKLVKTIQSYGISVLSTLMIGMETDTVESIRRIPDIIEEIGVDVP 338

Query: 203 SLYQLTIEKGTLFYKM 218
               +T   GT F+  
Sbjct: 339 RYNIITPYPGTPFFNQ 354


>gi|19922432|ref|NP_611207.1| CG6550 [Drosophila melanogaster]
 gi|122087244|sp|Q7K4W1|CDKAL_DROME RecName: Full=CDKAL1-like protein
 gi|7302795|gb|AAF57870.1| CG6550 [Drosophila melanogaster]
 gi|15291579|gb|AAK93058.1| GH28477p [Drosophila melanogaster]
 gi|220945770|gb|ACL85428.1| CG6550-PA [synthetic construct]
          Length = 552

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 107/325 (32%), Gaps = 34/325 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++                S  +  +G    S + 
Sbjct: 221 CLNQCTYCK-TKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSL- 278

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I ++  +   +      NP  + + + +            + + + VQS 
Sbjct: 279 PELLWQLVEVIPEHCMLRVGM-----TNPPYI-LEHLEEVANVLQHPRVYSFLHVPVQSG 332

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +   +    +   R   P ++   D+I   P +T   +E  +     Y 
Sbjct: 333 SDSVLGEMKREYCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEDDFEETMTLCAKYR 392

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-----EI 253
              L + Q     GT   KM +    ++      +     +    +      Y     E+
Sbjct: 393 FPSLFINQFFPRPGTPAAKMDRIPANLVKKRTKRLTDLFYSYEPYADRVGEIYTVLVTEV 452

Query: 254 SNH--SFLGAESLHNLNYWR----YGDYIGIGPGAHSRVKVGS-HRVAISIEKHPESWLK 306
           S+    ++G    HN +Y +      D + +G   H R+   S   +   I      W +
Sbjct: 453 SHDKLHYVG----HNKSYEQVLLPMRDNL-LGTRVHVRITSASKFSMVGEILDDERDWTR 507

Query: 307 MVRKNGHAVVEKEFLSSEQQADEFL 331
             +      V+ +  S E+    + 
Sbjct: 508 CAKNQELPNVQVQTRSRERLIQRYF 532


>gi|2501539|sp|Q49573|Y16R_MYCIO RecName: Full=Putative methylthiotransferase in 16S RNA 5'region
          Length = 438

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 13/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC            +   ++S L +++ +      +    I   G   +    +
Sbjct: 159 CNFMCSYC---IIPFSRGRQRSQKMESILEKIKTLV----SKXFKEIVLTGVNTAGYLDE 211

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGY---RKAGVNRISLGVQSLEEQ 143
           N     D +     +  +  + I +  P  +           +K       + +QS  + 
Sbjct: 212 NNNTFFDLLNNINKLDGDFRVRISSLEPFQINDEIIDLVTSNKKRFCQHWHICLQSGSDD 271

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R +   E    +    N  P  +F  D I   P +T    +  +       +  
Sbjct: 272 VLKKMNRKYTTDEFYKLMQKILNKSPLTNFTTDYIVGFPTETDEDQKKSIDFLNKIKLYD 331

Query: 202 LSLYQLTIEKGT 213
           + ++  +    T
Sbjct: 332 MHIFPYSKRNNT 343


>gi|145219131|ref|YP_001129840.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Prosthecochloris vibrioformis DSM 265]
 gi|145205295|gb|ABP36338.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium phaeovibrioides DSM 265]
          Length = 546

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C      RRY+    +NF+            L    ++         P++   
Sbjct: 205 CPFTCTFCSQWQFWRRYRARTPKNFVDEIEV-------LVKKYNVGFFILADEEPTI--- 254

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQS 144
            N    +    +      +V   I    + +  + +    +RKAG+  +SLG ++  + +
Sbjct: 255 -NKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDADLLPFFRKAGLVHVSLGTEAASQMN 313

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L    +     E   AI L +          +  L  +T    E   Q    +  D  + 
Sbjct: 314 LNRFRKETTIEENKLAIKLLQKNGIVAEAQFVMGLEHETPETIEETFQLCKDWDPDMANW 373

Query: 205 YQLTIEKGTLFYK 217
              T    +  +K
Sbjct: 374 TIYTPWPFSDLFK 386


>gi|333029498|ref|ZP_08457559.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Bacteroides coprosuis DSM 18011]
 gi|332740095|gb|EGJ70577.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Bacteroides coprosuis DSM 18011]
          Length = 459

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 23/203 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE-----NFIQSFLT----EMQWMRQLTGPRSISSIFFGG 78
           C   C YC    + R  +  +E     N +   +     E+  + Q        +   G 
Sbjct: 173 CNNFCTYC-IVPYTRGRERSREVESILNEVDDLIKKGYKEITLLGQNVNSYHFINKETG- 230

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
                 E      +L+ +A +   S+ +  +   +P  +  +  +   K       I L 
Sbjct: 231 ------EDIQFHHLLEIVATHAP-STRIRFSTS-HPKDMSDDTLRVIAKTPNICKHIHLP 282

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           VQS   + L+ + R +     +  I   + I P      D+      +T    +M L   
Sbjct: 283 VQSGSSRILKLMNRKYTREWYLDRIEAIKRIIPNCGITTDIFCGFHSETEEDHQMSLSLM 342

Query: 195 LSYAVDHLSLYQLTIEKGTLFYK 217
                D+  +++ +   GT   K
Sbjct: 343 EQCQFDYAFMFKYSERPGTYASK 365


>gi|325279061|ref|YP_004251603.1| MiaB-like tRNA modifying enzyme [Odoribacter splanchnicus DSM
           20712]
 gi|324310870|gb|ADY31423.1| MiaB-like tRNA modifying enzyme [Odoribacter splanchnicus DSM
           20712]
          Length = 428

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 18/194 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR----QLTGPRSISSIFFGGGTPSL 83
           C   C YC   +        +   +   L  ++ +     Q      +++  FG G    
Sbjct: 155 CDYFCTYC---TIPFARGRSRSASLPRILDALREVAGKGIQEVILTGVNTGDFGRG---- 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSLE 141
               N   +L  + +   ++     +IE  P+ +     +     K  +    + +QS  
Sbjct: 208 -TDMNFLQLLQQLDRQEEIARFRISSIE--PNLLTDEIIEFVATSKRFMPHFHIPLQSGS 264

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R ++       I   R++ P   +  D+I  +  +T   +E  L+   +  +
Sbjct: 265 DEVLKLMHRRYDRELFAGKIRTIRHLLPDAFIGVDVIAGMRGETEACFEDALRFIETLDI 324

Query: 200 DHLSLYQLTIEKGT 213
             L ++  +  +GT
Sbjct: 325 SRLHVFPYSERQGT 338


>gi|237755825|ref|ZP_04584424.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237692013|gb|EEP61022.1| conserved hypothetical protein [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 430

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +   +++      I++ + E +++  L     +  +       S     
Sbjct: 141 CDHTCSFCAIPNIRGKHRSKP---IEALVEEAKYLADLG----VKELNIVSQDTSYYGYD 193

Query: 88  NIAL--ILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + + +   +     I +    PS+V+ + F+  + +   ++ I + +Q  E+
Sbjct: 194 LYGKPMLFELLRQLEKIDGIKWIRLYYLYPSTVDEDFFKFIKDSEKILHYIEMPIQHSED 253

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R +   +    +       P M+    +I   P +T   +E           D
Sbjct: 254 KILKDMMRGYRKKKLYQILDWKEKYTPDMAIRSSVIVGYPMETEEDFESLKNFLQEAQFD 313

Query: 201 HLSLYQLTIEKGTLFYKMH 219
            L ++  + E+GT  Y+ H
Sbjct: 314 WLGVFVYSHEEGTPAYQKH 332


>gi|160938014|ref|ZP_02085371.1| hypothetical protein CLOBOL_02907 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439008|gb|EDP16763.1| hypothetical protein CLOBOL_02907 [Clostridium bolteae ATCC
           BAA-613]
          Length = 253

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 64/169 (37%), Gaps = 5/169 (2%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           ++    E++ +R L G      +F G G    +  + +  I D I + +     + +   
Sbjct: 1   MEQIEAELERVRSLGGNPK--HVFLGDGNAFGLGIKRLLEITDLIHRYFPDCQAINMDGT 58

Query: 112 -ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
             N  +      +  R+AG+  + LG++S  +  LR++G++HN  +A   I   ++    
Sbjct: 59  ITNIQAKSQEELRALREAGIRHLYLGIESGLDDVLRYMGKDHNLDQAYRQIDRIQSAGFI 118

Query: 171 MSFDLIYAL--PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
               ++  +    + +       +         +  + L +      Y+
Sbjct: 119 FDAHIMTGIAGHGRGLENGTATAEFFNRTQPQRIINFSLFLFHSAPLYQ 167


>gi|239628999|ref|ZP_04672030.1| radical SAM [Clostridiales bacterium 1_7_47_FAA]
 gi|239519145|gb|EEQ59011.1| radical SAM [Clostridiales bacterium 1_7_47FAA]
          Length = 358

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR       +  +    M       G    + +  GG  P     
Sbjct: 68  YCKNDCYYCG----IRRSNQKASRYRLTPEQVMDCCHTGYGLGFRTFVLQGGEDP-WFTD 122

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             IA +++ I   +      +  I  +    + + ++ +  AG +R  L  ++       
Sbjct: 123 DKIAYLVERIRGGYP-----DCAITLSVGEKDYDTYKMWFDAGADRYLLRHETANPCHYA 177

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +++     +   + I  +    ++   P QT      +L+       + + + 
Sbjct: 178 SLHPPQMSSAHRKECLGNLKKIGYQTGCGIMVGAPYQTTGHIAEDLEYMYGLQPEMVGIG 237

Query: 206 QLTIEKGTLFYKMH 219
                  T F    
Sbjct: 238 PFIPHHDTPFGDRP 251


>gi|159149044|dbj|BAF92592.1| methyltransferase [Streptomyces pactum]
 gi|212379250|gb|ACJ24866.1| putative C-methyltransferase [Streptomyces pactum]
          Length = 661

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 83/246 (33%), Gaps = 13/246 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI-EP 86
           C  KC +C +     +               ++    + G      +        L+ + 
Sbjct: 236 CPYKCAFCYWGGATGQKMRAFSR------ERLREELDVLGRHGAEILMLADSNFGLLRQD 289

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
           +     L  +   +   + +E +   N S+      +  +++G++    L +Q+++E  L
Sbjct: 290 EEFLEDLLRVRAKYGYPNRLETSWAKNKSAGFYRIMEKMKESGMHSAFILALQTMDESVL 349

Query: 146 RFLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R     ++  + +    +       +LI+  P +T+  +     RA  +    +++
Sbjct: 350 DLMRRRNMKLNDWESLVGWLTDHGITPYLELIWGAPGETVESFLDGYDRAARHTP-FIAV 408

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA-YEISNHSFLGAES 263
           + L +   T ++   +   LV          Y L     +             + + A S
Sbjct: 409 HPLMLLPNTEYHDKRQVHGLVTVRGEQDDFDYVLAHRTMTLDDNERMLRFICWNRVLARS 468

Query: 264 --LHNL 267
             LHN+
Sbjct: 469 LWLHNI 474


>gi|48477501|ref|YP_023207.1| oxidoreductase [Picrophilus torridus DSM 9790]
 gi|48430149|gb|AAT43014.1| hypothetical oxidoreductase [Picrophilus torridus DSM 9790]
          Length = 426

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 72/234 (30%), Gaps = 17/234 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGG 78
            P    C   C +C   SH+ R K+     E  +     +++   +     S+ +  +G 
Sbjct: 145 IPINQGCTGHCNFC--ISHISRGKLLSRSPEKIVGQVRMQIESGIREIRITSLDTAAYGK 202

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV-NRISLGV 137
              + +    I  I             +E     N   +       Y+   V   + L V
Sbjct: 203 DINTDL-ADLINSITGLDVDFMLRVGMMEPR---NTYDILEKLIDAYKNDKVFKFLHLPV 258

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS + + L  + R +   EA   I   +  FP    S D+I     +     E   +   
Sbjct: 259 QSGDNRILDSMNREYKIEEAGHVIKRFKEEFPDMVFSTDIIAGYYTEDSESMENTYKFIE 318

Query: 196 SYAVDHLSLYQLTIEKGT--LFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG 247
           +Y  D +++ + +    T     K          S+ +            S + 
Sbjct: 319 TYMPDIINITRFSPRPYTPDFSRKTMPSNITKEFSKKIMEMHKEYMDEKLSRYH 372


>gi|326802526|ref|YP_004320345.1| ribosomal protein S12 methylthiotransferase rimO [Sphingobacterium
           sp. 21]
 gi|326553290|gb|ADZ81675.1| Ribosomal protein S12 methylthiotransferase rimO [Sphingobacterium
           sp. 21]
          Length = 442

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 25/241 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                I+  ++E + + +      I     + + G     +
Sbjct: 156 CNRPCSFCA---IPLMRGKHISKPIEDLVSEAKHLAKNGTKELILIAQDLTYYG-----L 207

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           +      + D +     V     I ++ A PS   ++       R+   N + + +Q + 
Sbjct: 208 DLYGKRNLADLLRNLSDVEGIEWIRLQYAYPSGFPMDVLDVMNERQNICNYLDMPLQHIA 267

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     + I  ++  R+  P ++    LI   P +T   +   ++       
Sbjct: 268 DNMLKSMRRGITKQKTIDLVNAIRDKVPNIALRTTLICGYPGETEQDFAEMMEWVERTRF 327

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D L  +  + E+ T  + +       +P E          + I       +YEI N   +
Sbjct: 328 DRLGCFTYSHEEKTHAFSLVD----DVPQEEKESR----VEQIMEIQQGISYEI-NQEKV 378

Query: 260 G 260
           G
Sbjct: 379 G 379


>gi|323356750|ref|YP_004223146.1| 2-methylthioadenine synthetase [Microbacterium testaceum StLB037]
 gi|323273121|dbj|BAJ73266.1| 2-methylthioadenine synthetase [Microbacterium testaceum StLB037]
          Length = 515

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P++   +      +    + ++ + +QS  ++ L+ + R++ + + +  +   R  
Sbjct: 255 TSPHPAAFTDDVIAAMAETPAVMPQLHMPLQSGSDRILKAMRRSYRSEKFLGILDRVRER 314

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   ++ D+I   P +T   ++  L+   +        +Q +I +GT    M
Sbjct: 315 IPHAAITTDIIVGFPGETEEDFQETLRVVEAARFSSAFTFQYSIREGTPAATM 367


>gi|91201962|emb|CAJ75022.1| similar to 2-methylthioadenine synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 437

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 62/196 (31%), Gaps = 18/196 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  +C YC            + NF+   +  +    +      +  I       +     
Sbjct: 155 CDNRCTYCA-------IPGIRGNFMSRSIENILEESRQMASEGVKEINIISQDTTSYGLD 207

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +   Q + ++L+ IA    +       +  +P            +       I L +Q +
Sbjct: 208 IYGKQMLHVLLEKIAAIEGIQWIR--LLYTHPGHFYPELINTINEHETICKYIDLPIQHI 265

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  +GRN         I+  R     +     +I   P +T  Q++  L+      
Sbjct: 266 NDTILGKMGRNTTRKSIETLINNLRRSIRSIVLRTSVIVGFPGETDEQYQELLEFIKKTK 325

Query: 199 VDHLSLYQLTIEKGTL 214
            + L ++  + E+ T 
Sbjct: 326 FERLGVFAYSKEENTP 341


>gi|116625675|ref|YP_827831.1| radical SAM domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228837|gb|ABJ87546.1| Radical SAM domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 467

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 44/127 (34%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH 152
           L+       + + +   +++    +         +AG   + +GV+S  +  L  + +  
Sbjct: 270 LEFADAVEALGAQIPFKMQSRCDLMTRPTVGALARAGCTEVWMGVESGAQDVLDAMDKGT 329

Query: 153 NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKG 212
              +   A         R  + L +  P +T T+ E  L        D + +       G
Sbjct: 330 RLWQVYEARESLCRHGIRACYFLQFGYPGETWTEIEKTLALVRETRPDDIGVSVSYPLPG 389

Query: 213 TLFYKMH 219
           T F+KM 
Sbjct: 390 TAFHKMV 396


>gi|225850890|ref|YP_002731124.1| biotin synthase [Persephonella marina EX-H1]
 gi|254810768|sp|C0QR28|BIOB_PERMH RecName: Full=Biotin synthase
 gi|225645765|gb|ACO03951.1| biotin synthase [Persephonella marina EX-H1]
          Length = 336

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C  +S   +Y      +     +  +   Q    +   R              
Sbjct: 66  CSEDCSFCAQSS---KYPTPINAYGLVPKKELVEGAQKAVSIKANRYCIVTSGKRA---- 118

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I D + +   ++ N+ + +  +  +V+  + +  + +GV+R++  +++  E+
Sbjct: 119 -TKEEVEQIADAVRE---ITENLPVRVCVSIGTVDEEDLKLLKDSGVDRVNHNLET-SER 173

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + +   H+  E +  I   + +        I+ +  +T               V+ + 
Sbjct: 174 HFKNIVTTHSYKERLETIKTVQKVGLSTCTGGIFGI-GETDEDIVDLASVYRELNVNSIP 232

Query: 204 LYQLTIEKGTLF 215
           +  L    GT  
Sbjct: 233 MNFLIPIPGTPL 244


>gi|308184072|ref|YP_003928205.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori SJM180]
 gi|308059992|gb|ADO01888.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori SJM180]
          Length = 437

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLAHNGTKELMLLGQNVNNYGVRFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|153951503|ref|YP_001398505.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. doylei 269.97]
 gi|229890470|sp|A7H4S5|MIAB_CAMJD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|152938949|gb|ABS43690.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 433

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 64/218 (29%), Gaps = 28/218 (12%)

Query: 22  YVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           Y++    C K C YC     V   +  +   I      +    Q    +    IF  G  
Sbjct: 144 YINISIGCDKHCTYC----IVPHTRGDE---ISIPFNIIHKEAQKAVEKGAKEIFLLGQ- 195

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVE-----------ITIEANPSSVEVNNFQGYRKAG 129
                  N         K    S  +E                +P  ++    + +    
Sbjct: 196 ----NVNNYGKRFRNEHKKMDFSDLLEELSTIEDLERIRFTSPHPLHMDDKFLEVFANNP 251

Query: 130 --VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMT 185
                + + +QS   + L+ + R +     +      R + P +S   D+I A P ++  
Sbjct: 252 KVCKSMHMPLQSGSSEILKAMKRGYTKKWYLNRALKLRELCPNVSISTDIIVAFPGESEK 311

Query: 186 QWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            +E  +        + +  ++ +    T    M    D
Sbjct: 312 DFEETMDVLEKVRFEQIFSFKYSKRPLTKAATMSNQID 349


>gi|229820928|ref|YP_002882454.1| RNA modification enzyme, MiaB family [Beutenbergia cavernae DSM
           12333]
 gi|229566841|gb|ACQ80692.1| RNA modification enzyme, MiaB family [Beutenbergia cavernae DSM
           12333]
          Length = 549

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 79/241 (32%), Gaps = 17/241 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +  +  ++   +V     C   C +C     V   +  + +  +     + 
Sbjct: 184 ESLQVFPSTLPTKRESAFAAWVSVSVGCNNTCTFC----IVPHLRGKERD--RRPGEVLA 237

Query: 61  WMRQLTGPRSISSIFFGGGTPS----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSS 116
            +  +    +I     G    S      +    A +L    +   +          +P++
Sbjct: 238 EVAAVVDAGAIEVTLLGQNVNSYGVSFGDRGAFAKLLRACGEIEGLERVRF--TSPHPAA 295

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMS 172
              +           + ++ + +QS  ++ LR + R++ + + +  +    AR     ++
Sbjct: 296 FTDDVIDAMASTPNVMPQLHMPLQSGSDRILRAMRRSYRSEKFLGILDRVRARIPDAAIT 355

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVA 232
            D+I   P +T   +   L    +        +Q +   GT    +       + +E  A
Sbjct: 356 TDIIVGFPGETEEDFAATLDVVAASRFSSAFTFQYSPRPGTSAATLPDQVPADVVTERYA 415

Query: 233 V 233
            
Sbjct: 416 R 416


>gi|18312445|ref|NP_559112.1| hypothetical protein PAE1163 [Pyrobaculum aerophilum str. IM2]
 gi|18159903|gb|AAL63294.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 359

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 13/179 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV KCP C F     R    +E +++S       +        ++ +   GG    I P+
Sbjct: 62  CVAKCPICAFY----RLPGHKEGYLRSPEEVAAMVEFFHRQYGVTELHINGGFNPFIAPE 117

Query: 88  NIALILDGIAKNWTV-----SSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQSLE 141
               +   + K          +  E+   A             +++AG++ IS G   + 
Sbjct: 118 YFDELFRAVKKRAPHITIKGPTMAEVDYYARLWKTSWREVLSRWKEAGLDAISGGGAEIF 177

Query: 142 EQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + +R +   H  +  E +    +A  +    +  ++Y    + +      L R     
Sbjct: 178 AEEVRRIISPHKISGEEWVKIAEVAHEMGIPSNATMLYGHV-ERVEHVVDHLFRIKELQ 235


>gi|45361|emb|CAA40904.1| hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|151021|gb|AAA25711.1| ORF B; putative [Pseudomonas aeruginosa PAO1]
          Length = 165

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 47/155 (30%), Gaps = 16/155 (10%)

Query: 218 MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE----------SLHNL 267
             +     LPS    +++   T    +A G     + + +    E            +  
Sbjct: 3   QRRINADDLPSPGQKLEMLQRTTEQLAAAGYRYIGMDHFALPDDELASAQEDGTLQRNFQ 62

Query: 268 NYWRYG--DYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVEKEFLSSEQ 325
            Y  +G  D +G+G  A S++      +          +   +     A+      +S+ 
Sbjct: 63  GYTTHGHCDLVGLGVSAISQIGD----LYSQNSSDINDYQTSLDNGQLAIRRGLHCNSDD 118

Query: 326 QADEFLMMGLRLREGISVKDWEMLAGRNLDIECER 360
           +    ++  L     ++ +D E   G +       
Sbjct: 119 RVRRAVIQQLICHFELAFEDIETEFGIDFRSYFAE 153


>gi|300088002|ref|YP_003758524.1| radical SAM domain-containing protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527735|gb|ADJ26203.1| Radical SAM domain protein [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 460

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 63/231 (27%), Gaps = 17/231 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--FGGGTPSLIE 85
           C  KC +C   S +       E   +  + +M+ + Q    R I      F G       
Sbjct: 191 CPGKCTFC--YSPLFHKSYIGELSAERIVAQMEILYQRYNIRFIRFFEDTFTGNR----- 243

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
                 +             V    ++    +   +     +AG   + LGV++  ++ L
Sbjct: 244 ----ERLRRFCHLMIEKKLPVYWDCDSRIG-LTDEDIALMARAGCVSVGLGVETGSQRLL 298

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           +F+ +       +  +              I  LP +TM  +                  
Sbjct: 299 KFIRKGIGVETVVKTVSRLVRHRIMPRLYFIAELPTETMEDFRQTQNLIRRLGKPPYQYM 358

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
             T    T  Y       L+ P  ++            +A   +  E+   
Sbjct: 359 PYTPFPCTELYDYCVREKLLRPPSSLRE---WAGMGTLAAMNPYYLEVPRD 406


>gi|22536643|ref|NP_687494.1| biotin synthetase [Streptococcus agalactiae 2603V/R]
 gi|76788432|ref|YP_329198.1| biotin synthetase [Streptococcus agalactiae A909]
 gi|76797737|ref|ZP_00780004.1| biotin synthetase [Streptococcus agalactiae 18RS21]
 gi|77405578|ref|ZP_00782668.1| biotin synthetase [Streptococcus agalactiae H36B]
 gi|81455006|sp|Q8E197|BIOB_STRA5 RecName: Full=Biotin synthase
 gi|123602287|sp|Q3K2Q5|BIOB_STRA1 RecName: Full=Biotin synthase
 gi|22533482|gb|AAM99366.1|AE014213_5 biotin synthetase [Streptococcus agalactiae 2603V/R]
 gi|76563489|gb|ABA46073.1| biotin synthetase [Streptococcus agalactiae A909]
 gi|76586885|gb|EAO63376.1| biotin synthetase [Streptococcus agalactiae 18RS21]
 gi|77175800|gb|EAO78579.1| biotin synthetase [Streptococcus agalactiae H36B]
          Length = 330

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 9/190 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC  +              Q+ + +   +    G  S+  I   G  PS  E +
Sbjct: 68  CAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGA-SVFCIAMSGTKPSKREIE 126

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  I K+  +    EI + A    ++       ++AG++RI+  + + EE     
Sbjct: 127 QLCQVIPEIKKSLPL----EICLTA--GFLDREQLHQLKQAGIDRINHNLNTPEENY-PN 179

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +   H+  +    +    N    +    I  +  ++         R        + +  L
Sbjct: 180 IATTHSFKDRCDTLERIHNEDIDVCSGFICGM-GESDEGLITLAFRLKELDPYSIPVNFL 238

Query: 208 TIEKGTLFYK 217
              +GT   K
Sbjct: 239 LAVEGTPLGK 248


>gi|325997150|gb|ADZ49358.1| Dimethyl allyl adenosine tRNA methylthiotransferase [Helicobacter
           pylori 2017]
          Length = 426

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 137 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 190

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    +   + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 191 SSEHAKVGFSDLLDKLSEIQGIERIRF--TSPHPLHMNDEFLERFAKNPKVCKSIHMPLQ 248

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 249 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 308

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 309 VRFDTLYSFIYSPRPFT 325


>gi|307636963|gb|ADN79413.1| tRNA-i:6:A37 methylthiotransferase [Helicobacter pylori 908]
 gi|325995554|gb|ADZ50959.1| tRNA-i(6)A37 methylthiotransferase [Helicobacter pylori 2018]
          Length = 437

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    +   + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVGFSDLLDKLSEIQGIERIRF--TSPHPLHMNDEFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|225011708|ref|ZP_03702146.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A]
 gi|225004211|gb|EEG42183.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A]
          Length = 450

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 69/196 (35%), Gaps = 16/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF------GGGTP 81
           C  KC YC   +  +   V + + +++ +  ++ +   +G R I            G   
Sbjct: 165 CDYKCTYC---TIPQARGVSRSDTLENIINNVKKIGD-SGLREIVLTGVNIGDYGKGEFG 220

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           +         +++ I    ++      +IE  P+ +  +       +   V    + +QS
Sbjct: 221 NKKHQHTFLELINAIDMVKSIDRIRISSIE--PNLLNDDIIDFVSGSNRFVPHFHIPLQS 278

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
             ++ L+ + R +     +  +   +   P   +  D+I   P +T   +    +     
Sbjct: 279 GSDRILKSMRRRYLTPLYLQRVARIKEAMPNACIGVDVIVGYPGETEEDFLTSYRFLADL 338

Query: 198 AVDHLSLYQLTIEKGT 213
            V +L ++  +    T
Sbjct: 339 DVSYLHVFTYSERPNT 354


>gi|169342699|ref|ZP_02863740.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens C str. JGS1495]
 gi|169299205|gb|EDS81275.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens C str. JGS1495]
          Length = 445

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     F    L  +    +      +  +       +     
Sbjct: 157 CDNFCTYC----IIPKIRGK---FRSRALESIVEEAKKLAENGVKELILIAQDTTNYGID 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           +   + + L+L  +AK   +       +   P ++     +         N + L +Q +
Sbjct: 210 IYGEKKLHLVLRELAKIEGIEWIR--VLYCYPEAIYDELIKEISVNDKVCNYLDLPIQHI 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR     E I  I+  R   P +     LI   P ++   +        +  
Sbjct: 268 SNNVLKRMGRKTTKEEIIGKINDLRKNVPNIVLRTSLIVGFPGESCEDFNELKDFIKTIK 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           +D + ++  + E+GT    M    D
Sbjct: 328 LDKVGVFTYSREEGTPAAIMEDQID 352


>gi|167629376|ref|YP_001679875.1| magnesium-protoporphyrin ix monomethyl ester anaerobic oxidative
           cyclase [Heliobacterium modesticaldum Ice1]
 gi|167592116|gb|ABZ83864.1| magnesium-protoporphyrin ix monomethyl ester anaerobic oxidative
           cyclase [Heliobacterium modesticaldum Ice1]
          Length = 547

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 64/209 (30%), Gaps = 24/209 (11%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      R Y+V            +  +  L    
Sbjct: 186 YIYIPLNCRVAVPNFARGCPFTCRFCSQWKFWRTYRVRHPK------KFVDEIETLVKDH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRK 127
            +         P++    N    +    +      +V   I    + +  + +    YRK
Sbjct: 240 KVGFFILADEEPTI----NRDKFVAMCQELIDRKLDVHWGINTRVTDILRDAHLLPFYRK 295

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  ISLG ++  + +L    +     E   AI + +          I  L  ++    
Sbjct: 296 AGLVHISLGTEAATQMNLDRFRKETTMEENKRAIDMIKANGMVAEAQFIMGLENESPKTI 355

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           E   Q A  +  D ++    T    +  +
Sbjct: 356 EETFQLARYWDADMVNWNMYTPWPFSELF 384


>gi|167622468|ref|YP_001672762.1| Elongator protein 3/MiaB/NifB [Shewanella halifaxensis HAW-EB4]
 gi|167352490|gb|ABZ75103.1| Elongator protein 3/MiaB/NifB [Shewanella halifaxensis HAW-EB4]
          Length = 259

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 15/185 (8%)

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I L++        V+      +  N  +      Q  R+ G+  + +G +S +++ L 
Sbjct: 50  EAICLLIKQY--LPNVTRISSYCLPRNIDNKTPEQLQRLRELGLTLLYIGCESGDDEVLA 107

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSL 204
            + +      ++AA+   +    + S  ++  L     +    E   +   +   ++LS 
Sbjct: 108 RINKGETFDSSLAALLKIKAAGIKASVMILNGLGGVELSKLHAENSAKLMNAAQPEYLST 167

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESL 264
             +T+  GT        G   LPS+    +  ++  S    +                S 
Sbjct: 168 LVVTLPLGTERMDKAFGGHFQLPSQAQLFEEMHILLSKLELN-----------KTVFRSD 216

Query: 265 HNLNY 269
           H  NY
Sbjct: 217 HASNY 221


>gi|262197995|ref|YP_003269204.1| RNA modification enzyme, MiaB family [Haliangium ochraceum DSM
           14365]
 gi|262081342|gb|ACY17311.1| RNA modification enzyme, MiaB family [Haliangium ochraceum DSM
           14365]
          Length = 521

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 73/247 (29%), Gaps = 22/247 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C K C +C     V  +  G+E    +    ++ +R          +  G    S   E 
Sbjct: 220 CDKFCTFC-----VVPFTRGRERG-SAPREILRQVRAYVEAGYREVVLLGQTVNSYRYED 273

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
              A +L  +A+   +           P                    + L +QS  ++ 
Sbjct: 274 VGFAELLRAVARVDGLERIRF--TSPYPVDFTAEVIDAIASEDKVCKYVHLPLQSGSDEV 331

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +   +  A +   R   P   +S D++ +   +T    +  L        D  
Sbjct: 332 LARMRRGYTVDDFRAIVAALRARMPDIAISTDILSSFSGETEADHQATLALMRELRFDSA 391

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +++ +    T   K        LP +    D       I +     + E+        E
Sbjct: 392 FMFRYSERSLTYAAKK-------LPDDVSEADKKRRLAEIIALQERISAEVFAAQIGKRE 444

Query: 263 S--LHNL 267
              LHN 
Sbjct: 445 RVLLHNR 451


>gi|167756282|ref|ZP_02428409.1| hypothetical protein CLORAM_01815 [Clostridium ramosum DSM 1402]
 gi|167703690|gb|EDS18269.1| hypothetical protein CLORAM_01815 [Clostridium ramosum DSM 1402]
          Length = 352

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 13/196 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +RR       +  +    +    +        +    GG     + 
Sbjct: 63  YCKNDCYYCG----LRRSNKLALRYRLNLEEIL-LCCKEGYRLGFRTFVLQGGEDEYYQD 117

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  I++ I + +      +  I  +        +Q Y  AG +R  L  ++   +   
Sbjct: 118 ERMVEIIEKIKELYP-----DCAITLSLGEKSKETYQKYFNAGADRYLLRHETYNREHYY 172

Query: 147 FLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            L   H  +    I  +   + I  +     +     Q +     +L        + + +
Sbjct: 173 QLH-PHEMSFDNRIDCLLNLKAIGFQTGCGFMVGSYHQDIDCLVNDLLFIKELKPEMVGI 231

Query: 205 YQLTIEKGTLFYKMHK 220
               + + T F     
Sbjct: 232 GPYLVHQNTPFKNQPN 247


>gi|15924566|ref|NP_372100.1| hypothetical protein SAV1576 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927156|ref|NP_374689.1| hypothetical protein SA1405 [Staphylococcus aureus subsp. aureus
           N315]
 gi|156979894|ref|YP_001442153.1| hypothetical protein SAHV_1563 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|255006362|ref|ZP_05144963.2| hypothetical protein SauraM_07835 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|13701374|dbj|BAB42668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247347|dbj|BAB57738.1| putative 2-methylthioadenine synthetase [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|156722029|dbj|BAF78446.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
          Length = 448

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|21283257|ref|NP_646345.1| hypothetical protein MW1528 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486411|ref|YP_043632.1| hypothetical protein SAS1514 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651969|ref|YP_186473.1| hypothetical protein SACOL1633 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160469|ref|YP_494231.1| hypothetical protein SAUSA300_1536 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195385|ref|YP_500189.1| hypothetical protein SAOUHSC_01679 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268060|ref|YP_001247003.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH9]
 gi|150394128|ref|YP_001316803.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH1]
 gi|151221691|ref|YP_001332513.1| hypothetical protein NWMN_1479 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509804|ref|YP_001575463.1| hypothetical protein USA300HOU_1577 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253316051|ref|ZP_04839264.1| hypothetical protein SauraC_07882 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253732229|ref|ZP_04866394.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733173|ref|ZP_04867338.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257793652|ref|ZP_05642631.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
 gi|258411048|ref|ZP_05681328.1| RNA modification protein [Staphylococcus aureus A9763]
 gi|258420148|ref|ZP_05683103.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
 gi|258437408|ref|ZP_05689392.1| RNA modification protein [Staphylococcus aureus A9299]
 gi|258443614|ref|ZP_05691953.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258446821|ref|ZP_05694975.1| RNA modification protein [Staphylococcus aureus A6300]
 gi|258448735|ref|ZP_05696847.1| RNA modification protein [Staphylococcus aureus A6224]
 gi|258450595|ref|ZP_05698657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
 gi|258453552|ref|ZP_05701530.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
 gi|262049149|ref|ZP_06022026.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
 gi|262051236|ref|ZP_06023460.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
 gi|269203204|ref|YP_003282473.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893077|ref|ZP_06301311.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
 gi|282920125|ref|ZP_06327850.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
 gi|282928209|ref|ZP_06335814.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
 gi|284024635|ref|ZP_06379033.1| hypothetical protein Saura13_08590 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294848607|ref|ZP_06789353.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
 gi|295406699|ref|ZP_06816504.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
 gi|296275802|ref|ZP_06858309.1| hypothetical protein SauraMR_05622 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297207705|ref|ZP_06924140.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245719|ref|ZP_06929584.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
 gi|300911786|ref|ZP_07129229.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380835|ref|ZP_07363495.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|21204697|dbj|BAB95393.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244854|emb|CAG43315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286155|gb|AAW38249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126443|gb|ABD20957.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202943|gb|ABD30753.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741129|gb|ABQ49427.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946580|gb|ABR52516.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374491|dbj|BAF67751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368613|gb|ABX29584.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253724018|gb|EES92747.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728713|gb|EES97442.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787624|gb|EEV25964.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
 gi|257840198|gb|EEV64662.1| RNA modification protein [Staphylococcus aureus A9763]
 gi|257843859|gb|EEV68253.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
 gi|257848613|gb|EEV72601.1| RNA modification protein [Staphylococcus aureus A9299]
 gi|257851020|gb|EEV74963.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854396|gb|EEV77345.1| RNA modification protein [Staphylococcus aureus A6300]
 gi|257858013|gb|EEV80902.1| RNA modification protein [Staphylococcus aureus A6224]
 gi|257861753|gb|EEV84552.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
 gi|257864283|gb|EEV87033.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
 gi|259160873|gb|EEW45893.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
 gi|259162818|gb|EEW47383.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
 gi|262075494|gb|ACY11467.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941066|emb|CBI49450.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282590016|gb|EFB95098.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
 gi|282594473|gb|EFB99458.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
 gi|282764395|gb|EFC04521.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
 gi|283470855|emb|CAQ50066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285817258|gb|ADC37745.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Staphylococcus aureus 04-02981]
 gi|294824633|gb|EFG41056.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
 gi|294968446|gb|EFG44470.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
 gi|296887722|gb|EFH26620.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177370|gb|EFH36622.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
 gi|298694858|gb|ADI98080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886032|gb|EFK81234.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304340562|gb|EFM06496.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312829964|emb|CBX34806.1| RNA modification enzyme, MiaB family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129855|gb|EFT85845.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315198728|gb|EFU29056.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140539|gb|EFW32393.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144076|gb|EFW35845.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323440474|gb|EGA98186.1| hypothetical protein SAO11_0770 [Staphylococcus aureus O11]
 gi|323443248|gb|EGB00866.1| hypothetical protein SAO46_0897 [Staphylococcus aureus O46]
 gi|329727386|gb|EGG63842.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329728416|gb|EGG64853.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733119|gb|EGG69456.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 448

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|300933041|ref|ZP_07148297.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Corynebacterium resistens DSM 45100]
          Length = 507

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +  +   +  V   ++ + +QS  ++ L+ + R++ + + +A +   R  
Sbjct: 243 TSPHPAEFTDDVIEAMAETPVVCPQLHMPLQSGSDKVLKDMRRSYRSKKFLAILEKVRER 302

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   ++ D+I   P +T   ++  +             +Q +   GT   +M
Sbjct: 303 IPHAAITTDIIVGFPGETEEDFQATMDVVEKSRFASAYTFQYSPRPGTPAAEM 355


>gi|78189497|ref|YP_379835.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
 gi|78171696|gb|ABB28792.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
          Length = 462

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 77/236 (32%), Gaps = 21/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     K  +   I   + EM++ +   G ++I+  F      S  +  
Sbjct: 200 CPVGCNFC--TTPTIYGKSYRYREIDIVIDEMKYHQDRVGKQNITFSFMDDNI-SFRQNY 256

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            + L+ +        ++N+ +    NP        +   ++G + +S+G +SL   +L+ 
Sbjct: 257 FMELLNEMSQLGVNWNANISMNFLYNP-----EVAELAARSGCDLMSIGFESLNPDTLKS 311

Query: 148 LG----RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           +     R  N S     +         +    ++     T   ++   +  +   ++   
Sbjct: 312 MNKGSNRLQNYSTV---VSNLHKHGIAIQAYFMFGFDDDTEKSFDAVYEFIMENRIEFPV 368

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL------TQSITSAHGLHAYEI 253
              +T   GT ++   K        +      +         Q   S+      E+
Sbjct: 369 FSLVTPFPGTPYFDEMKPRMFHFDWDKYDTYHFMFEPKKIAGQQFLSSFIKLQKEV 424


>gi|329314252|gb|AEB88665.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
           aureus T0131]
          Length = 448

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|301163425|emb|CBW22976.1| putative oxidoreductase [Bacteroides fragilis 638R]
          Length = 432

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 14/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR---SISSIFFGGGTPSLI 84
           C +KC YC       R+       I+  L E++++              + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRH---VSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ I++   V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KKQMLPELIERISEIPGVEWIRLHY--AYPAHFPKELFRVMRERDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R+    E    I   R   P +     L+   P +T   +E   +       D
Sbjct: 259 NMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEEDFEELKEFVRKVRFD 318

Query: 201 HLSLYQLTIEKGTL 214
            +  +  + E+GT 
Sbjct: 319 RMGAFTYSEEEGTY 332


>gi|296122454|ref|YP_003630232.1| RNA modification enzyme, MiaB family [Planctomyces limnophilus DSM
           3776]
 gi|296014794|gb|ADG68033.1| RNA modification enzyme, MiaB family [Planctomyces limnophilus DSM
           3776]
          Length = 440

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 63/218 (28%), Gaps = 18/218 (8%)

Query: 28  CVKKCPYCDFNSH----VRRYKVGQENFIQSFLTE----MQWMRQLTGPRSISSIFFGGG 79
           C  +C YC         + R     E  ++  +      +       G   +       G
Sbjct: 148 CALRCTYCIIPQVRPHLISREPEDIEREVRQLIANGYQEIILTGVHIGHYGVDLRRRTAG 207

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGV 137
            P +     +  ++D + K          +IEA  + +           +    +    +
Sbjct: 208 APRI----RLWHLIDRLDKIAGHWRMRLSSIEA--AEMTDEFISSVSSAEHLCPQFHPAL 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL 195
           QS     L  + R +   + I  +   +   P    S D+I   P +T  ++   L    
Sbjct: 262 QSGSNAVLSRMRRRYTKEKFIDIVDQLKEALPHPGFSTDVIVGFPGETDEEFAETLDVCQ 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
           +     +  +  +  +GT            + +  +  
Sbjct: 322 NVGFTKIHAFSFSAREGTPAATFPDRVHGHVINARIKA 359


>gi|237747925|ref|ZP_04578405.1| tRNA modifying enzyme [Oxalobacter formigenes OXCC13]
 gi|229379287|gb|EEO29378.1| tRNA modifying enzyme [Oxalobacter formigenes OXCC13]
          Length = 461

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 24/240 (10%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSIS 72
           YV     C K C YC                ++  L E+  + +        L    +  
Sbjct: 164 YVSIMEGCSKFCSYC---IVPYTRGAEVSRPLEDVLVEIIGLAEQGVKEITLLGQNVNAY 220

Query: 73  SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--V 130
                GG     E  + AL+++ +A    +     +T  ++P          Y +    V
Sbjct: 221 RGAMAGG-----EIADFALLIETVADIPGIERIRFVT--SHPKEFTQRLIDVYERVPQLV 273

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE 188
           + + L  Q   ++ L  + R +   E  + I   + I P   +S D I   P +T   ++
Sbjct: 274 SHLYLPAQHGSDRILAAMKRGYTVLEYKSIIRRLKAIRPDLLVSSDFIVGFPGETDADFD 333

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++       D+   +  +   GT    +  D  L +  ++    L    +  T  H +
Sbjct: 334 AMMKLIDDIDFDNSFSFLYSPRPGTPAAALPIDIPLDV-RKDRLQRLQTRIEEQTRQHNM 392


>gi|218132828|ref|ZP_03461632.1| hypothetical protein BACPEC_00689 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991701|gb|EEC57705.1| hypothetical protein BACPEC_00689 [Bacteroides pectinophilus ATCC
           43243]
          Length = 460

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 71/210 (33%), Gaps = 24/210 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------LTGPRSISSIFFGGGTP 81
           C + C YC            +    +    E++ + +      +     +SS       P
Sbjct: 154 CNQFCSYC---IIPYTRGRVRSRRPEDVTAEVRRLVEKGYKEFILAGIHLSSYGIDFEAP 210

Query: 82  SL---------IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--V 130
                      +    +  +++ +     V      + E  P  +     +   +     
Sbjct: 211 CDEAVDYRAANMPGSRLLELIEAVCSVEGVKRLRLGSFE--PRILTEAFVKRMAELEPVC 268

Query: 131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWE 188
               + +QS  + +L+ + R + A E   +  L R  FP   ++ D+I   P++T  ++ 
Sbjct: 269 PHFHISLQSGCDATLKRMNRRYTADEYEESCKLLRKYFPNAAITTDVIVGFPQETDEEFA 328

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +  +         + +++ +  KGT   +M
Sbjct: 329 ITKEYLERIHFYEMHVFKYSRRKGTAADRM 358


>gi|116327643|ref|YP_797363.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330557|ref|YP_800275.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281687|sp|Q04UA3|MIAB_LEPBJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|122284560|sp|Q053R5|MIAB_LEPBL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|116120387|gb|ABJ78430.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124246|gb|ABJ75517.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 449

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 33/206 (16%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQ-----------WMRQLTGPRSISSI 74
           C   C +C     V  Y  G+E      S + E+Q            + Q          
Sbjct: 164 CNNFCTFC-----VVPYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSYKEQGT 218

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
            F G    L++   I  I             +   +  NP                  I 
Sbjct: 219 DFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRF-------------CPNIH 265

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +Q+   + L  + R+++  E +  +   RNI P +    D+I   P +T  ++E  L 
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKM 218
                  D   +++ +  +GT+  K 
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMARKK 351


>gi|317180074|dbj|BAJ57860.1| putative ATP-binding protein [Helicobacter pylori F32]
          Length = 437

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCTYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|312888457|ref|ZP_07748031.1| SSU ribosomal protein S12P methylthiotransferase [Mucilaginibacter
           paludis DSM 18603]
 gi|311299085|gb|EFQ76180.1| SSU ribosomal protein S12P methylthiotransferase [Mucilaginibacter
           paludis DSM 18603]
          Length = 444

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                ++  + + + + +      +     + + G    L 
Sbjct: 158 CNRPCSFCA---IPLMRGKHLSTPMEQLVKDAENLARNGTKELVVIAQDLTYYGLD--LY 212

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
             +N+  +L    +   V+    I ++ A PS   +        R    N + + +Q + 
Sbjct: 213 GKRNLDELL---RRLSDVNGIEWIRLQYAYPSGFPMEVLDVMNERSNICNYMDMPLQHIS 269

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     + I  ++  R+  P ++F   LI   P +T   +E  +        
Sbjct: 270 DNMLKSMRRGITKQKTIDIVNAIRDKVPDIAFRTTLITGYPGETQQDFEEMMDWVEETRF 329

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
           D L  +  + E+ T  +++ 
Sbjct: 330 DRLGCFTYSHEEKTHAHQLV 349


>gi|281355187|ref|ZP_06241681.1| MiaB-like tRNA modifying enzyme YliG [Victivallis vadensis ATCC
           BAA-548]
 gi|281318067|gb|EFB02087.1| MiaB-like tRNA modifying enzyme YliG [Victivallis vadensis ATCC
           BAA-548]
          Length = 452

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 71/222 (31%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPS 82
           C  +C YC   S        +   ++S + E + + +  G R +  I      +G   P 
Sbjct: 165 CNNRCTYC---SIPGIRGRLRTRPMESVVREARNLIE-GGVRELLVIAQDITVYGNDRPE 220

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQS 139
                 +A +L  +       + V   +  +P+           +     +  + + +Q 
Sbjct: 221 --SGDTLARLLTALNALEG--NFVIRLLYTHPAHYTEEFIDFMARGNTKVLPYLDIPLQH 276

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
           + ++ L+ + R+    +    +   R   P ++     I   P +T  +++     A  +
Sbjct: 277 ISDRILKQMNRHVTRKQTEELLTKLRERIPGLTLRTTFITGFPGETEEEYQELKSFAKKF 336

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             +   ++  + E  T            L  +     +    
Sbjct: 337 KFERCGVFPYSPEPRTPAAAFPDQVPAELAEQRSTELMKQQI 378


>gi|239617912|ref|YP_002941234.1| RNA modification enzyme, MiaB family [Kosmotoga olearia TBF 19.5.1]
 gi|239506743|gb|ACR80230.1| RNA modification enzyme, MiaB family [Kosmotoga olearia TBF 19.5.1]
          Length = 440

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 16/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C K C YC     +  Y  G+E   +S    +  +++L         + G    S    L
Sbjct: 152 CNKFCSYC-----IVPYTRGREKS-RSMEDILNEVKRLASKGYREVTYLGQNVDSYGKDL 205

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR-KAGVNR-ISLGVQSLE 141
            +   +A ++    K   +       + + P                V+R I L +QS  
Sbjct: 206 ADGSTLAKLIRETLKIEQIERIWY--LTSYPKDFSDELIDVIATSKRVSRSIHLPIQSGS 263

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +   E +  I   R   P   +S D+I   P ++   +            
Sbjct: 264 NRILKAMNRGYTREEYLDLIRRIRTKVPDASISTDIIVGFPGESEDDYLQTKSLLEEVIF 323

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
           + ++L   +  +GT+  K  KD            +L  L + +         
Sbjct: 324 ERVNLAIYSPREGTISAKYMKDDVPHEIKVRRLQELLELQKCLNRKINSEYI 375


>gi|257387570|ref|YP_003177343.1| MiaB-like tRNA modifying enzyme [Halomicrobium mukohataei DSM
           12286]
 gi|257169877|gb|ACV47636.1| MiaB-like tRNA modifying enzyme [Halomicrobium mukohataei DSM
           12286]
          Length = 420

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 29/208 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-------------ENFIQSFLTEMQWMRQLTGPRSISSI 74
           C+  C YC     + +   G+                + +   E++   Q TG     + 
Sbjct: 134 CMSDCSYC-----ITKQATGRIESPSVEENVEKARALVHAGAKELRVTGQDTGVYGWDTN 188

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNR 132
                  SL+ P+ +  I   I   + V   +      +   V     + + +     N 
Sbjct: 189 Q----GESLL-PELLERICTEIDGEFRVRVGMANPKGVH--GVREELARVFAEHDELYNF 241

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEME 190
           +   VQS  +  L  + R H   E +A +        +  +S D I   P +T + ++  
Sbjct: 242 LHAPVQSGSDDVLADMRRQHAVGEYVAVVDTFDEYLDYWTLSTDFIVGFPSETESDFQQS 301

Query: 191 LQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +        + +++ + +   GT    M
Sbjct: 302 MALLRETRPEKINVTRFSKRPGTDAADM 329


>gi|237734919|ref|ZP_04565400.1| biotin synthase [Mollicutes bacterium D7]
 gi|229382247|gb|EEO32338.1| biotin synthase [Coprobacillus sp. D7]
          Length = 352

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 58/196 (29%), Gaps = 13/196 (6%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC       R+        +  L E+    +        +    GG     + 
Sbjct: 63  YCKNDCYYCG-----LRHSNKLALRYRLNLEEILLCCKEGYRLGFRTFVLQGGEDEYYQD 117

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + +  I++ I + +      +  I  +        +Q Y  AG +R  L  ++   +   
Sbjct: 118 ERMVEIIEKIKELYP-----DCAITLSLGEKSKETYQKYFNAGADRYLLRHETYNREHYY 172

Query: 147 FLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            L   H  +    I  +   + I  +     +     Q +     +L        + + +
Sbjct: 173 QLH-PHEMSFDNRIDCLLNLKAIGFQTGCGFMVGSYHQDIDCLVNDLLFIKELKPEMVGI 231

Query: 205 YQLTIEKGTLFYKMHK 220
               + + T F     
Sbjct: 232 GPYLVHQNTPFKNQPN 247


>gi|146329852|ref|YP_001210121.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus
           VCS1703A]
 gi|229890515|sp|A5EXA7|MIAB_DICNV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146233322|gb|ABQ14300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus
           VCS1703A]
          Length = 456

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 79/224 (35%), Gaps = 20/224 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGG--GT 80
           C K C YC       R       F            Q  G R I+ +      + G    
Sbjct: 160 CSKYCTYC--VVPYTRGAEISRPFDDVLAECATLAAQ--GVREINLLGQNVNAYRGAMHD 215

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            ++    ++AL+++ +A    +      T  ++PS       + YR+    V+ + L VQ
Sbjct: 216 GTI---ADLALLIEYVAAIPNIGRIRFTT--SHPSEFSDALIETYRRVPKLVSHLHLPVQ 270

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S   + L  + R++  +E    +   R I P +SF  D I   P +    ++  +    +
Sbjct: 271 SGSNRILALMKRDYKVAEYQEKLAKIRAIRPDISFSSDFIVGFPGEEEEDFQATMDLIEA 330

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
              D    +  +   GT    M     L +  E +A     + +
Sbjct: 331 VFFDTSYSFIYSQRPGTPASTMPDRVPLTVKKERLARLQARILE 374


>gi|296274392|ref|YP_003657023.1| MiaB-like tRNA modifying protein YliG [Arcobacter nitrofigilis DSM
           7299]
 gi|296098566|gb|ADG94516.1| MiaB-like tRNA modifying enzyme YliG [Arcobacter nitrofigilis DSM
           7299]
          Length = 446

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 80/226 (35%), Gaps = 19/226 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP- 86
           C + C +C   S   +         ++  + ++ ++ L         F    + S +   
Sbjct: 154 CNQVCSFCAIPSFKGKLHS------RTLESLVKEVKNLVAQGFYDFSFVSQDSSSFLRDL 207

Query: 87  ---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
                +  +++ + K   + S   + +   PS+  ++  +   ++ V  N   + +Q + 
Sbjct: 208 NINDGLERLVNEVEKIEGIKSARILYL--YPSTTTLSLIKKIEQSKVFENYFDMPLQHIS 265

Query: 142 EQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            + L+ + R        E ++A+    N F R +   I   P +T   +E        Y 
Sbjct: 266 SKVLKIMKRGKGVEKLKELMSAMRNTPNSFVRTT--FIAGHPGETQEDFEELCSYVEEYG 323

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            D  +++  + E GT  Y++    D     +   +    + +    
Sbjct: 324 FDRANVFSYSDEDGTTAYELDGKVDQETIDKRAEILGEIIQRKTLE 369


>gi|167750510|ref|ZP_02422637.1| hypothetical protein EUBSIR_01486 [Eubacterium siraeum DSM 15702]
 gi|167656436|gb|EDS00566.1| hypothetical protein EUBSIR_01486 [Eubacterium siraeum DSM 15702]
          Length = 486

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 76/231 (32%), Gaps = 19/231 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  +  G+E   +     +  ++ L        +  G    S  +  
Sbjct: 203 CNNFCTYC-----IVPFVRGRERS-RRPEEVIAEVKGLINDGYKEILLLGQNVNSYGKEY 256

Query: 88  NIA--LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQ 143
           +     +L  + K           + ++P             +      + L VQ   ++
Sbjct: 257 DFGFAKLLSELDKIPGKYKLSF--MTSHPKDCTHELIDTIADSRHISYHLHLPVQCGSDR 314

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R+++ +  +  I  A+   P+++   D+I   P +T   +   ++       D 
Sbjct: 315 ILKEMNRHYDTAHYLELIEYAKKRIPKVALTTDIIVGFPGETYEDFLGTVELMKKVRYDS 374

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +  +  +GT    M         S+      +     + ++ G  AYE
Sbjct: 375 AYTFIYSKREGTKAAAMPD-----PISDEDKGKWFRQLLDVQNSIGEKAYE 420


>gi|150016098|ref|YP_001308352.1| MiaB-like tRNA modifying enzyme YliG [Clostridium beijerinckii
           NCIMB 8052]
 gi|238065361|sp|A6LSR6|RIMO_CLOB8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|149902563|gb|ABR33396.1| MiaB-like tRNA modifying enzyme YliG [Clostridium beijerinckii
           NCIMB 8052]
          Length = 465

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 92/281 (32%), Gaps = 28/281 (9%)

Query: 7   YENNMTGQGSNSL-----GVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           Y +    +G   +       Y+     C   C YC       +++  +       +  + 
Sbjct: 149 YSDENINEGKRIITTQRESAYIRIAEGCNNFCTYCIIPKIRGKFRSRK-------MENII 201

Query: 61  WMRQLTGPRSISSIFFGGGTPSLIEPQ-----NIALILDGIAKNWTVSSNVEITIEANPS 115
              +      +  I       +L         N+ ++L  ++K   +       +   P 
Sbjct: 202 NEARDLSESGVKEIILIAQDTTLYGSDIYGKKNLHVLLKELSKIEGIEWIR--VLYCYPE 259

Query: 116 SVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
            +           +  V  + + +Q + ++ L+ +GR  +  + I  I + R   P +  
Sbjct: 260 EIYDELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSKKDIINKIQILRERVPEIVI 319

Query: 174 D--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVL---PS 228
               I   P +T   +   +     Y ++ +  +  + E+ T   KM    D  +     
Sbjct: 320 RTTFIVGFPNETDEDFNEIIDFLKEYKLEKVGAFTYSQEEDTPAAKMDGQIDEEIKEKRE 379

Query: 229 ENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY 269
           E++ +   N+++ I        Y+I    + G    +  +Y
Sbjct: 380 EDLMLLQKNISEEINKLKIGKLYDILVEGYNGK-CYYGRSY 419


>gi|317496832|ref|ZP_07955162.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895844|gb|EFV17996.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 347

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 17/197 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N +  RY++ +E  + +     Q      G RS   +  GG  P  
Sbjct: 63  YCKNNCYYCGIQGSNPNANRYRLSKEEILSACENGYQL-----GYRSF--VLQGGEDP-H 114

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I K +      +  I  +       ++Q    AG +R  L  ++ + +
Sbjct: 115 YTDEIMVPIVAEIRKRYP-----DCAITLSLGERSKESYQKLYDAGADRYLLRHEAADLE 169

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + L     +    I  +   + I   +    +   P QT+     +L          +
Sbjct: 170 LYQKLHPESLSLENRIQCLWNLKEIGYAVGTGFMVGAPYQTVENLADDLLFIKELDPQMV 229

Query: 203 SLYQLTIEKGTLFYKMH 219
            +        T F +  
Sbjct: 230 GIGPFVPHHDTRFKEFP 246


>gi|313226156|emb|CBY21299.1| unnamed protein product [Oikopleura dioica]
          Length = 1581

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +  F    +         S  +  +G    +   
Sbjct: 204 CLNSCTYCK-TKHARGDLASYPIDEIVARFEQAFEQGIVEVWLTSEDTGAYGRDIGT--- 259

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
             NI  +L+ + K       + I +  NP  + + + +G  K        + + + VQS 
Sbjct: 260 --NIVELLNAVVKTIPEGCMMRIGM-TNPPYI-LEHLEGIAKILNHPRVYSFLHVPVQSG 315

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +N  +    +   R   P  +   D+I   P +T   ++  +     Y 
Sbjct: 316 SDAVLNSMRREYNREDFCKVVDTLRANVPDCNIATDIIAGFPTETEEDFDETISLCEKYK 375

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   K 
Sbjct: 376 FPSLFMNQFFPRPGTPAAKW 395


>gi|268315685|ref|YP_003289404.1| biotin synthase [Rhodothermus marinus DSM 4252]
 gi|262333219|gb|ACY47016.1| biotin synthase [Rhodothermus marinus DSM 4252]
          Length = 344

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 58/202 (28%), Gaps = 13/202 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC   S + +  + +   +       +  +          I   G  P     +
Sbjct: 66  CPEDCHYCSQ-SRISKAPIPRYRMLSVEEILDRARKAYAAGAQRFCIVTSGRGP---HRR 121

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSS--VEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +  +L+   +        E+ +E       ++    +  R+AGV+  +  + +   +  
Sbjct: 122 ELETVLEATRRI-----KAELPLEICACMGILDEEQARQLREAGVDAYNHNLNT-SPRHY 175

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H   + I  +  A     +    +I  +  +T                  + + 
Sbjct: 176 ARICSTHTFEDRIRTVQTALKAGLQTCTGVILGM-GETDEDVLDMAYALREAGATSIPVN 234

Query: 206 QLTIEKGTLFYKMHKDGDLVLP 227
            L   KGT          L   
Sbjct: 235 FLIPIKGTPLGDGQTVRHLTPW 256


>gi|255532825|ref|YP_003093197.1| MiaB-like tRNA modifying enzyme [Pedobacter heparinus DSM 2366]
 gi|255345809|gb|ACU05135.1| MiaB-like tRNA modifying enzyme [Pedobacter heparinus DSM 2366]
          Length = 439

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 9/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +        + + I++ +   + + + +G + I       G   +   +
Sbjct: 152 CDYPCTYC---TIPLARGGSRSDTIENVINRARQIAE-SGVKEIVLTGVNLGDFGIRNGE 207

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQS 144
                 D +     V     I I    P+ +     +     K  V    + +QS   + 
Sbjct: 208 REDKFFDLVKALDEVEGIERIRISSIEPNLLSNEIVEFVATSKRFVPHFHIPLQSGSNKI 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R +        +   + + P   +  D+I   P +T   +    Q      + +L
Sbjct: 268 LGLMRRRYQRELYTERVAKIKAVMPNCCIGVDVIVGFPGETQEDFLDTYQFLNELDISYL 327

Query: 203 SLYQLTIEKGTLFYKM 218
            ++  +  + T   +M
Sbjct: 328 HVFTYSEREQTAAAEM 343


>gi|227824423|ref|ZP_03989255.1| RNA modification enzyme [Acidaminococcus sp. D21]
 gi|226904922|gb|EEH90840.1| RNA modification enzyme [Acidaminococcus sp. D21]
          Length = 441

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 32/203 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI--- 84
           C   C YC            +    ++   E++            ++  G    +L+   
Sbjct: 158 CNNFCTYC---IVPYVRGRERSRSAEAICHEIE-----------KAVALGYKEFTLLGQN 203

Query: 85  ---------EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRI 133
                    E +  + +L+ +     V       + ++P  +     +   +        
Sbjct: 204 VNSYGKDRGEEEGFSKLLELVDAIPGVERIRY--MTSHPRDMSEAVVRTIAESQHICKNF 261

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMEL 191
            + VQS   + ++ + R ++    +  +   R   P   ++ DLI   P +T   +E  L
Sbjct: 262 HIPVQSGSSRIMKAMNRGYDRERYLKLVETIRRCVPDAVITTDLIVGFPGETEKDFEETL 321

Query: 192 QRALSYAVDHLSLYQLTIEKGTL 214
               +   D    +  +  KGT 
Sbjct: 322 DLLRTVEYDDAFTFIYSPRKGTP 344


>gi|332521166|ref|ZP_08397624.1| MiaB-like tRNA modifying enzyme YliG [Lacinutrix algicola 5H-3-7-4]
 gi|332043259|gb|EGI79456.1| MiaB-like tRNA modifying enzyme YliG [Lacinutrix algicola 5H-3-7-4]
          Length = 435

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 80/242 (33%), Gaps = 23/242 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C            +   I+  +TE + +        I     + + G    L 
Sbjct: 148 CDRPCSFCA---IPLMRGKHKSTPIEDLVTEAEKLAANGVKELILIAQDLTYYGLD--LY 202

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + +N+A +L+ + K   +         A P+   ++     ++     N + + +Q + +
Sbjct: 203 KKRNLAELLENLVKVEGIEWIRLHY--AFPTGFPMDVLDIMKREPKICNYLDIPLQHISD 260

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R     +    +    A+     +   LI   P +T   ++   +       +
Sbjct: 261 NILKSMRRGTTKEKTTKLLKEFRAKVPEMTIRTTLIAGYPGETEENFQELKEWVREMRFE 320

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG 260
            L  +  + E+ T  + +  D                    I       ++E+ N + +G
Sbjct: 321 RLGCFTYSHEENTHAFNLEDDVP--------EEVKMQRVNEIMEIQSQISWEL-NQAKIG 371

Query: 261 AE 262
            E
Sbjct: 372 QE 373


>gi|313220891|emb|CBY31727.1| unnamed protein product [Oikopleura dioica]
          Length = 1590

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +  F    +         S  +  +G    +   
Sbjct: 204 CLNSCTYCK-TKHARGDLASYPIDEIVARFEQAFEQGIVEVWLTSEDTGAYGRDIGT--- 259

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
             NI  +L+ + K       + I +  NP  + + + +G  K        + + + VQS 
Sbjct: 260 --NIVELLNAVVKTIPEGCMMRIGM-TNPPYI-LEHLEGIAKILNHPRVYSFLHVPVQSG 315

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +N  +    +   R   P  +   D+I   P +T   ++  +     Y 
Sbjct: 316 SDAVLNSMRREYNREDFCKVVDTLRANVPDCNIATDIIAGFPTETEEDFDETISLCEKYK 375

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   K 
Sbjct: 376 FPSLFMNQFFPRPGTPAAKW 395


>gi|255263244|ref|ZP_05342586.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
 gi|255105579|gb|EET48253.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
          Length = 417

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 21/203 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISS----IFFGGGTP 81
           C  +C +C     +  Y  G    + +   + +++ +R       + +      +G   P
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVPAGVVVDQIKRLRDSGYNEVVLTGVDLTSWGADLP 201

Query: 82  SLIEPQNIA-LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           +  +  N+   IL  +     +  +   +IE     V+    Q        +  + L +Q
Sbjct: 202 AQPKLGNLVLRILKLVPDLPRLRISSIDSIE-----VDDALMQAIATEPRLMPHLHLSLQ 256

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
             ++  L+ + R H   +AI     AR + P M+F  D+I   P +T   +E  L+    
Sbjct: 257 HGDDLILKRMKRRHLRDDAIRFSEDARKLRPEMTFGADIIAGFPTETDAHFENSLRLVED 316

Query: 197 YAVDHLSLYQLTIEKGTLFYKMH 219
             +  L ++  +   GT   KM 
Sbjct: 317 CHLTWLHVFPYSARIGTPAAKMP 339


>gi|315497313|ref|YP_004086117.1| miab-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48]
 gi|315415325|gb|ADU11966.1| MiaB-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48]
          Length = 443

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 72/236 (30%), Gaps = 27/236 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS----IFFG---GGT 80
           C  +C +C            +       + ++  +        + +      +G    G 
Sbjct: 165 CDHRCTFC---IIPYGRGNSRSAAAGDVVGQISRLVAEGYNEVVLTGVDLTSWGNDLPGQ 221

Query: 81  PSLIEPQNIALILDGIAKNWTVS----SNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
           P L     +A IL  +     +        EI         E      Y       + L 
Sbjct: 222 PQL--GHLVARILKHVPNLKRLRLSSIDAAEIDDTLLRLFAEEERLAPY-------LHLS 272

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           +Q  ++  L+ + R H  ++AI  +   R + P +    D+I   P +T   +   L   
Sbjct: 273 LQHGDDLILKRMKRRHLRADAIRLVQKVRVLRPDVAFGADMIAGFPTETEEHFANSLALV 332

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               +  L ++  +    T   K+ +    ++  ++ A  L        + H    
Sbjct: 333 DECDLAFLHVFPYSPRPQTPAAKIPQLPRALI--KDRAARLRGKAVEALTRHLDKQ 386


>gi|251795309|ref|YP_003010040.1| radical SAM protein [Paenibacillus sp. JDR-2]
 gi|247542935|gb|ACS99953.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
          Length = 608

 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 42/155 (27%), Gaps = 7/155 (4%)

Query: 93  LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQSLRFLG 149
           L+                E     +         +    GV R  +GVQS  + +   + 
Sbjct: 243 LEMFKFLIENHRGCVFQFEITADIMRPEVLDYLAEHAPPGVFRFEIGVQSTNDPTNEAVQ 302

Query: 150 RNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
           R  N  + +  +   +         DLI  LP +    +            + L L  L 
Sbjct: 303 RRQNWKKLVRTVTKVKESGKIDQHLDLIAGLPLENYDTFRGTFNDVFELGPEELQLGFLK 362

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
           + +GT   +   D D              L   + 
Sbjct: 363 MLRGTGLRR---DADKWGYIYMDHAPYEMLGNELM 394


>gi|218460924|ref|ZP_03501015.1| coproporphyrinogen III oxidase [Rhizobium etli Kim 5]
          Length = 170

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 16/161 (9%)

Query: 243 TSAHGLHAYEISNHSFLGAESLHNLNYWRYGD-----YIGIGPGAHSRVKVGSHRVAISI 297
             +  LH   IS  +          N+  Y        IG+G  A  R+  G  +  +  
Sbjct: 1   MGSIILHCRTIS-WALAARNRTLRRNFQGYTTDDCDSLIGLGASAIGRLPAGYMQNHVP- 58

Query: 298 EKHPESWLKMVRKNGHAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE 357
                 + + +        +   LS E +    ++  L       +      +G +    
Sbjct: 59  ---LGLYAERIAFGVLPTAKGYLLSEEDKLRARVIERLMCDFEADLGQLSSGSGFDTGFL 115

Query: 358 CERN-----LQRQGFIERVQFSRLRCTQRGMTMLDSVIANL 393
            ERN     L   G +  +   R+   +    M+ +V A  
Sbjct: 116 VERNDRLGELMADG-VVTISGERIVVCEEARFMVRAVAAAF 155


>gi|110803553|ref|YP_698478.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
           perfringens SM101]
 gi|123341843|sp|Q0STS9|MIAB_CLOPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|110684054|gb|ABG87424.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           SM101]
          Length = 447

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +S    ++ + +L           G    S    +
Sbjct: 165 CNNFCTYC-----IVPYVRGRERSRKS-EDIIKEIEELVSKGYKEITLLGQNVNSYGKGL 218

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E   + A +L  + +   +       + ++P  +  +     ++      ++ L VQS  
Sbjct: 219 EEDIDFAGLLRKVNEVKGLERVRF--MTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGS 276

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++    +  +   ++  P ++   D+I   P +T   +   L        
Sbjct: 277 SRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVGY 336

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +    T   KM
Sbjct: 337 DSAFTFIYSRRNHTPADKM 355


>gi|196232149|ref|ZP_03131004.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
 gi|196223871|gb|EDY18386.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
          Length = 443

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 75/221 (33%), Gaps = 15/221 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQEN------FIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C  KC +C + + +       E+      +   ++    ++R + G     SI+F   T 
Sbjct: 216 CPFKCLFCVWPATMTGNDPDGEHRRTVRHYTAEYMEG--FLRDIVGRYGFRSIYFDDDTF 273

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           + +  +++  + + + K       +         ++    ++  R++G   + LG +S  
Sbjct: 274 N-LGNRHVERMCEVMRKI-----ALPWGAMCRADTINRETWKLMRESGCYGVKLGFESGN 327

Query: 142 EQSLRFL-GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  +  +  +  +  EA       RN+   +     Y LP +T  Q         S  + 
Sbjct: 328 QHVVDNIVNKGLDLQEARETTIYLRNLGMTVHGTFTYGLPGETKEQMAETKAYIRSLPLT 387

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
                     +GT  + +   G L   S     + Y     
Sbjct: 388 SYQESGTAEIEGTPLHTLRSAGHLEKYSGATMDENYRQVSD 428


>gi|189462252|ref|ZP_03011037.1| hypothetical protein BACCOP_02938 [Bacteroides coprocola DSM
          17136]
 gi|189431054|gb|EDV00039.1| hypothetical protein BACCOP_02938 [Bacteroides coprocola DSM
          17136]
          Length = 48

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 20 GVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQS 54
          G+Y+H PFC ++C YCDF S  +  K  + ++I +
Sbjct: 11 GIYLHIPFCKRRCIYCDFYSTTQNEK--KSSYINA 43


>gi|167763971|ref|ZP_02436098.1| hypothetical protein BACSTE_02354 [Bacteroides stercoris ATCC
           43183]
 gi|167698087|gb|EDS14666.1| hypothetical protein BACSTE_02354 [Bacteroides stercoris ATCC
           43183]
          Length = 455

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 67/238 (28%), Gaps = 18/238 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +  Y  G+E       + +  +  L           G    S    +
Sbjct: 171 CNNFCTYC-----IVPYTRGRERSRD-VESILNEVADLVAKGYKEVTLLGQNVNSYRFEK 224

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               ++       TV+ +          ++P  +     Q   +       I L VQS  
Sbjct: 225 ADGEVVTFPMLLRTVAESAPGVRIRFTTSHPKDMSDETLQVIAEVPNVCKHIHLPVQSGS 284

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R +     +  +   R I     +S D+      +T     + L        
Sbjct: 285 SRILKLMNRKYTREWYLERVDAIRRIISDCGLSTDIFSGFHSETEEDHRLSLSLMEECGY 344

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPS----ENVAVDLYNLTQSITSAHGLHAYEI 253
           D   +++ +   GT   K   D             +      L+    +      YE+
Sbjct: 345 DAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQNRLSAEANARCMGKTYEV 402


>gi|154492267|ref|ZP_02031893.1| hypothetical protein PARMER_01901 [Parabacteroides merdae ATCC
           43184]
 gi|154087492|gb|EDN86537.1| hypothetical protein PARMER_01901 [Parabacteroides merdae ATCC
           43184]
          Length = 431

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 10/215 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       RY+      I+  +  +  ++Q      + +         L +  
Sbjct: 146 CDRTCSYCAIPISTGRYQSIPMEEIEKEVRLL--VKQGVKEFQVIAQDLTYYGLDLYKRH 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSL 145
            +  +++ I+    V           PS    +  +    R      + + +Q + +  L
Sbjct: 204 ALPELVERISDIPGVEWIRLHY--GYPSHFPYDLLRVMSERDNVCKYMDIALQHISDPML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + RN    E  A I   R   P +     L+   P +T   +E  ++       + + 
Sbjct: 262 KKMRRNITKEETYALIRRMREEVPGIHLRTTLMVGHPGETEQDFEELVEFVKEARFERMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
            +  + E+GT  +K +   D + P        Y +
Sbjct: 322 AFAYSHEEGTYSFKHYT--DDIDPEVKQDRLDYLM 354


>gi|282916846|ref|ZP_06324604.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus D139]
 gi|283770652|ref|ZP_06343544.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
 gi|282319333|gb|EFB49685.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460799|gb|EFC07889.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
          Length = 448

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|270297050|ref|ZP_06203249.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273037|gb|EFA18900.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 352

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 66/195 (33%), Gaps = 23/195 (11%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N ++ RY++ QE  +       +            +    GG    +
Sbjct: 62  CRNNCYYCGIRKENRNIVRYELAQEEILSCCHEGYRL--------GFRTFVLQGGEAPAV 113

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           + + +   +  I +++      +  I  +        ++ +  AG NR  L  ++  E  
Sbjct: 114 KDEGMVETVAAIRQSFP-----DCAITLSLGEKSREAYERFFLAGANRYLLRHETCNEGH 168

Query: 145 LRFLGRNHNASEAI----AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
            R L   H A  ++      +   + I  ++   ++   P QT+     ++     +  +
Sbjct: 169 YRKL---HPAEMSLPHRLQCLEWLKEIGYQVGTGIMVGSPYQTVDHLVEDILFIERFHPE 225

Query: 201 HLSLYQLTIEKGTLF 215
            + +        T F
Sbjct: 226 MIGMGPFLPHHDTPF 240


>gi|260436076|ref|ZP_05790046.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
 gi|260413950|gb|EEX07246.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
          Length = 458

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 67/214 (31%), Gaps = 13/214 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C  +C +C     + + +  Q +     +  +         + +  +       +   ++
Sbjct: 157 CDYRCAFC----IIPKLRGDQRS---RPIESIVAEAHQLAEQGVQELILISQITTNYGLD 209

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + + +     V         A P+ +  +    YR+    V  + L +Q    +
Sbjct: 210 LYGKPKLAELLRALGDVEIPWIRVHYAYPTGLTPDVLAAYREVPNVVPYLDLPLQHSHPE 269

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R   A      +   R+  P       LI   P +T   ++  +        DH
Sbjct: 270 VLRAMNRPWQADVNDRLLDQIRDQLPDAVLRTTLIVGFPGETEEHFQHLMGFLERQRFDH 329

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + ++  + E GT   ++    D  +        +
Sbjct: 330 VGVFTFSPEDGTAAAELPDRVDPEVAQARKDALM 363


>gi|257456539|ref|ZP_05621735.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257446199|gb|EEV21246.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 498

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 114 PSSVEVNNFQGYRKAGV-NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           P  ++           +     L VQS  +  L+ + R +  +    A+   R +     
Sbjct: 294 PDRIDEALVPLLAHPRICPHFHLSVQSGSDAVLKTMHRGYKNTTVYHAVSELRRVKGDPF 353

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK 220
           +  D+I   P +T   +E   +         +  +  +   GT  +KM  
Sbjct: 354 IGADIITGFPGETEADFEETYRMCRELNFAGIHAFPFSARPGTEAWKMQP 403


>gi|57239481|ref|YP_180617.1| hypothetical protein Erum7550 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579459|ref|YP_197671.1| hypothetical protein ERWE_CDS_07950 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161560|emb|CAH58487.1| conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418085|emb|CAI27289.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 413

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +         +  ++   I   P  +               + L +QS     L+ 
Sbjct: 209 QLRRLRLSSIDVAEIEDDLIDIIGNEPRFMP-------------HLHLSLQSGNNLILKR 255

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R HN  + +   +    +   + F  D+I   P +T   +   ++      + +L ++
Sbjct: 256 MKRRHNREQVVEFCNRVSGMRKDIVFGADIIVGFPTETEDMFNDTVKLIEEANISYLHIF 315

Query: 206 QLTIEKGTLFYKMHK 220
             +  +GT   +M +
Sbjct: 316 PYSAREGTPAARMPQ 330


>gi|332703256|ref|ZP_08423344.1| RNA modification enzyme, MiaB family [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553405|gb|EGJ50449.1| RNA modification enzyme, MiaB family [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 445

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 20/204 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVG-----QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS 82
           C   C YC     V + +         + +      +    +      I+   FG   P 
Sbjct: 149 CSHGCTYC----IVPQGRGPSRSRPMADILAEARRLLASGFREIILGGINLRHFGRDLP- 203

Query: 83  LIEPQNIALILDGIAK--NWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGV 137
             +  ++  +L  +        +    + + + +P+ +          +      + L +
Sbjct: 204 --DAPDLWDLLAFLDSELAPKWAGRARLRLSSLDPAQLGGKALDTLAASRLVCPHLHLSL 261

Query: 138 QSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           QSL  + LR +GR H    E    +     ++P      DL+   P +T   +E  +   
Sbjct: 262 QSLSPEILRSMGRGHYAPEEIEGFLRELEKVWPTFALGADLLVGFPGETDGHFEQTVTAL 321

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
               + +  ++  +   GT    M
Sbjct: 322 DRLPLTYAHVFPYSKRPGTRAANM 345


>gi|146302766|ref|YP_001197357.1| MiaB-like tRNA modifying enzyme [Flavobacterium johnsoniae UW101]
 gi|146157184|gb|ABQ08038.1| MiaB-like tRNA modifying enzyme [Flavobacterium johnsoniae UW101]
          Length = 444

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 10/199 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG-GGTPSLIE 85
           C  KC YC   +      + + + +++ L   + +  Q      ++ +  G  G      
Sbjct: 154 CDYKCTYC---TIPLARGISRSDALENVLKNAKEISAQNIREIVLTGVNIGDYGKGEFGN 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            ++    LD +     V     + I    P+ ++        K+   V    + +QS   
Sbjct: 211 KKHEHTFLDLVQALDKVDGIERLRISSIEPNLLKNETIDFVSKSRTFVPHFHIPLQSGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +     I  ++  R + P   +  D+I   P +T   +           + 
Sbjct: 271 DILKLMKRRYLREVYIDRVNKIREVMPHACIGVDVIVGFPGETDEHFLETYHFLNELDIS 330

Query: 201 HLSLYQLTIEKGTLFYKMH 219
           +L ++  +    T    M 
Sbjct: 331 YLHVFTYSERDNTEAVDMP 349


>gi|283780939|ref|YP_003371694.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
 gi|283439392|gb|ADB17834.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
          Length = 465

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 67/230 (29%), Gaps = 16/230 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C       ++              ++  RQL     +  +       +     
Sbjct: 172 CDRLCTFCAIPKMRGKHATKP------MEEVLKEARQLAAD-GVKELVIVAQDTTYYGID 224

Query: 88  NI--ALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
                 + + + +   V     I +    P  +         K+   V  I + +Q + +
Sbjct: 225 LYGEPRLAELLREIEKVEGIQWIRLMYFYPMYITDELIDVIAKSEKIVPYIDMPLQHIND 284

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             LR + R    +E    I   R   P ++     I   P +T  Q+E   +       +
Sbjct: 285 TMLRRMSRRVTRAETELQIKKLREAIPNLTLRTTFITGFPGETQEQYEELREFLREQKFE 344

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
            + ++  + E  T    +     L    +N   +     Q   +     A
Sbjct: 345 RMGVFTYSFEPDTPAANLPDH--LSEEVKNERREALMAVQQELAFAWNEA 392


>gi|256003299|ref|ZP_05428291.1| Radical SAM domain protein [Clostridium thermocellum DSM 2360]
 gi|255992990|gb|EEU03080.1| Radical SAM domain protein [Clostridium thermocellum DSM 2360]
 gi|316939214|gb|ADU73248.1| Radical SAM domain protein [Clostridium thermocellum DSM 1313]
          Length = 453

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC        +   +   +   + ++     +     +         PS     
Sbjct: 180 CPHNCSYCSLKKI--YHNTFRTRPVDEVIKDI---ASMPNKYFVFWDDNFFADPSY---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                   +     ++      + A+    +    +  + AG   + LG++S  EQ L+ 
Sbjct: 231 ----TKALLKDLAKLNKKWAAQVTAHSCE-DEELLRLAKSAGCLYLFLGLESFSEQGLKD 285

Query: 148 LGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             ++ N  E               +   +++     T   +E  L+      +D ++   
Sbjct: 286 ANKSFNKIEQYGKIADKLHRHGISIQAGIVFGFDSDTPDVFETTLKACNDIGIDGVTASI 345

Query: 207 LTIEKGTLFYKMHKD 221
           LT   GT  Y  +K+
Sbjct: 346 LTPFPGTGIYDQYKN 360


>gi|119773547|ref|YP_926287.1| hypothetical protein Sama_0407 [Shewanella amazonensis SB2B]
 gi|119766047|gb|ABL98617.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 294

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 81/218 (37%), Gaps = 9/218 (4%)

Query: 31  KCPYCDFNSHV-RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNI 89
           +C +CD  +   +R++  +E+ I++        +       I  +F   G    +    +
Sbjct: 30  RCRFCDMYTAEQKRFRAFKEDKIEA-----DLKQAAASGVPIRRVFLADGDAMTLPFSRL 84

Query: 90  ALILDGIAKN-WTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             IL  I +    VS      +  N S+  V      R+ G++ + +G +S +++ L  +
Sbjct: 85  EAILLLIHRYLPDVSRISSYCLPRNLSNKSVEQLVRLRELGLSLMYVGCESGDDEVLARV 144

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQ 206
            +    + ++AA+   R    + S  ++  L     +        +   +   D+LS   
Sbjct: 145 EKGETFASSLAALEKIRAAGMKSSVMILTGLGGIHLSQQHAINSARLMNAAQPDYLSTLV 204

Query: 207 LTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
           +T+  G        D D  LP +   ++      +   
Sbjct: 205 VTLPLGKARMDEGYDKDFRLPEQRGLLEEMYTLLAHLE 242


>gi|120601740|ref|YP_966140.1| biotin synthase [Desulfovibrio vulgaris DP4]
 gi|254810694|sp|A1VB97|BIOB_DESVV RecName: Full=Biotin synthase
 gi|120561969|gb|ABM27713.1| biotin synthase [Desulfovibrio vulgaris DP4]
          Length = 361

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 66/219 (30%), Gaps = 15/219 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLI 84
           C + C +C  +SH             ++ L   + +RQ    R        G     + +
Sbjct: 104 CPEDCAFCAQSSHHATGSPVHALLDAETLLRRAEELRQSGAER-------YGIVTSGTRL 156

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +  + +   +   +     I +  +   +  +     ++AG +     +++     
Sbjct: 157 TVRELDTLCEAAVR---IRRETGIALCGSLGQLTPDAAACLKEAGFSSYHHNLET-SRSF 212

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +   H   + IA +  AR    R     I+ +  +T  Q            VD + +
Sbjct: 213 FPAICSTHAYDDDIATVRAARAAGLRTCSGGIFGM-GETDAQRIELSATLRELDVDSIPV 271

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L+   GT          +          L +  + I 
Sbjct: 272 NLLSPIPGTPLQHRPTMPPMRALVSIAIYRLMHPARDIL 310


>gi|291288283|ref|YP_003505099.1| MiaB-like tRNA modifying enzyme YliG [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885443|gb|ADD69143.1| MiaB-like tRNA modifying enzyme YliG [Denitrovibrio acetiphilus DSM
           12809]
          Length = 435

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 22/202 (10%)

Query: 28  CVKKCPYCDFNSH----VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG--GGTP 81
           C  +C YC         V R         +S +     +++L      ++ +     G P
Sbjct: 144 CDNRCSYCAIPGIRGGLVSRKMEDIVKEAESLVDG--GVKELIVISQDNTKYGKDIYGKP 201

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQ 138
           S+  P+ +  +         +  + +I I   NP  V           K  ++   + VQ
Sbjct: 202 SM--PELLKKL-------EGIEGDFKIRIMYLNPDGVTQELIDVICGSKKILSYFDIPVQ 252

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
              ++ L+ + R  ++S         R   P   +   +I   P +T   +    +    
Sbjct: 253 HYSDKMLKAMKRKSDSSIIDDVYDSIRKADPESFIRTTMIVGFPGETEGDFAELEKFLTR 312

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
           +  D    +    EKGT  Y++
Sbjct: 313 HKPDFAGFFPYYREKGTSAYEL 334


>gi|281418534|ref|ZP_06249553.1| Radical SAM domain protein [Clostridium thermocellum JW20]
 gi|281407618|gb|EFB37877.1| Radical SAM domain protein [Clostridium thermocellum JW20]
          Length = 453

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC        +   +   +   + ++     +     +         PS     
Sbjct: 180 CPHNCSYCSLKKI--YHNTFRTRPVDEVIKDI---ASMPNKYFVFWDDNFFADPSY---- 230

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                   +     ++      + A+    +    +  + AG   + LG++S  EQ L+ 
Sbjct: 231 ----TKALLKDLAKLNKKWAAQVTAHSCE-DEELLRLAKSAGCLYLFLGLESFSEQGLKD 285

Query: 148 LGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             ++ N  E               +   +++     T   +E  L+      +D ++   
Sbjct: 286 ANKSFNKIEQYGKIADKLHRHGISIQAGIVFGFDSDTPDVFETTLKACNDIGIDGVTASI 345

Query: 207 LTIEKGTLFYKMHKD 221
           LT   GT  Y  +K+
Sbjct: 346 LTPFPGTGIYDQYKN 360


>gi|157962097|ref|YP_001502131.1| radical SAM domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157847097|gb|ABV87596.1| Radical SAM domain protein [Shewanella pealeana ATCC 700345]
          Length = 642

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 57/171 (33%), Gaps = 16/171 (9%)

Query: 30  KKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           +KC +CD  S  ++ R+           +  ++ + + TG      +         + P+
Sbjct: 376 RKCSFCD-VSLDYIDRFDAAGA---DVLVDRIEQLIEETGETGFHFVDE------ALPPK 425

Query: 88  NIALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  +    I +   +S    I  E    +      Q    +G   +S G++   ++ L+
Sbjct: 426 LLFALAKRLIERKVVISWWGNIRFE---RTFSRARCQLLADSGCIAVSGGLEVASDRLLK 482

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            + +  +            +    +   L+Y  P QT  +    L+     
Sbjct: 483 LMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQM 533


>gi|160880222|ref|YP_001559190.1| biotin synthase [Clostridium phytofermentans ISDg]
 gi|160428888|gb|ABX42451.1| Radical SAM domain protein [Clostridium phytofermentans ISDg]
          Length = 372

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 65/191 (34%), Gaps = 11/191 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           FC   C YC     +R+     E + +    E+    ++       +    GG     + 
Sbjct: 83  FCKNDCFYCG----IRKSNANAERY-RLLEDEILSACEIGYELGFRTYVLQGGEDGYYKD 137

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             I  ++  I +++   S+  IT+     S +   +  Y +AG +R  L  ++  E+  +
Sbjct: 138 DFICNLISRIKRDY---SDCAITLSIGERSYDS--YLSYYQAGADRYLLRHETASEEHYQ 192

Query: 147 FLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L   N   S     +   ++I  ++    +   P Q       +L          + + 
Sbjct: 193 KLHPSNLTLSNRKRCLWDLKSIGYQVGSGFMVGSPYQKPENLIEDLLFLHELQPHMVGIG 252

Query: 206 QLTIEKGTLFY 216
                K T F 
Sbjct: 253 PFIPHKDTPFA 263


>gi|18310657|ref|NP_562591.1| hypothetical protein CPE1675 [Clostridium perfringens str. 13]
 gi|168207519|ref|ZP_02633524.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens E str. JGS1987]
 gi|168211437|ref|ZP_02637062.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens B str. ATCC 3626]
 gi|168214492|ref|ZP_02640117.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens CPE str. F4969]
 gi|168216962|ref|ZP_02642587.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens NCTC 8239]
 gi|182626371|ref|ZP_02954125.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens D str. JGS1721]
 gi|261876147|ref|YP_696362.2| putative tRNA modifying protein [Clostridium perfringens ATCC
           13124]
 gi|81766992|sp|Q8XJS9|RIMO_CLOPE RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|238065375|sp|Q0TPS8|RIMO_CLOP1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|18145338|dbj|BAB81381.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|170661121|gb|EDT13804.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens E str. JGS1987]
 gi|170710553|gb|EDT22735.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens B str. ATCC 3626]
 gi|170714028|gb|EDT26210.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens CPE str. F4969]
 gi|177908322|gb|EDT70870.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens D str. JGS1721]
 gi|182380907|gb|EDT78386.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens NCTC 8239]
 gi|255529895|gb|ABG84692.2| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens ATCC 13124]
          Length = 445

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     F    L  +    +      +  +       +     
Sbjct: 157 CDNFCTYC----IIPKIRGK---FRSRALESIVEEAKKLAENGVKELILIAQDTTNYGID 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           +   + + L+L  +AK   +       +   P ++     +         N + L +Q +
Sbjct: 210 IYGEKKLHLVLRELAKIEGIEWIR--VLYCYPEAIYDELIKEISVNDKVCNYLDLPIQHI 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR     E I  I+  R   P +     LI   P ++   +        +  
Sbjct: 268 SNNVLKRMGRKTTKEEIIGKINDLRKNVPNIVLRTSLIVGFPGESCEDFNELKDFIKTIK 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           +D + ++  + E+GT    M    D
Sbjct: 328 LDKVGVFTYSREEGTPAAIMEDQID 352


>gi|312886291|ref|ZP_07745904.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM
           18603]
 gi|311301236|gb|EFQ78292.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM
           18603]
          Length = 440

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 9/194 (4%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEPQNI 89
           C Y C F +        + + ++S L + + +        + + +  G     + + +  
Sbjct: 153 CDYSCTFCTIPLARGASRSDTVESVLEQARAIAASGVKEIVLTGVNIGDYG--IRDGKRE 210

Query: 90  ALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLR 146
               D +     V     I I    P+ +     +     K       + +QS   + L 
Sbjct: 211 HKFFDLVKALDEVDGIDRIRISSIEPNLLTDEIIEFVAVSKRFAPHFHIPLQSGSNKILS 270

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R +        +   + + P   +  D+I   P +T   +           + +L +
Sbjct: 271 LMRRRYKRELYADRVAKIKQLMPDCCIGVDVIVGFPGETREDFVETYNFLNELNISYLHV 330

Query: 205 YQLTIEKGTLFYKM 218
           +  +  + TL  +M
Sbjct: 331 FTYSERENTLAAEM 344


>gi|237739285|ref|ZP_04569766.1| radical SAM domain-containing protein [Fusobacterium sp. 2_1_31]
 gi|229422893|gb|EEO37940.1| radical SAM domain-containing protein [Fusobacterium sp. 2_1_31]
          Length = 440

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   S  + Y    +      L  + ++             F    P+ +  +
Sbjct: 177 CPNKCTYC---SVTKMYSGKNQ------LKNIDFVVSEIKSNKHKKWVF--YDPNFLADK 225

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           + A  ++ + +   +      +   N  + ++   Q  ++AG   + +G++S  +++L  
Sbjct: 226 SYA--INLMNELKKLKIKWTASATINIGN-DIKMLQLMKEAGCIGLVIGLESFIQENLNG 282

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  +N  E    +   ++    +   L+  +   T+              VD      
Sbjct: 283 VNKGFNNVKEYKRLVSTIQSYGISVLSTLMIGMETDTVESIRQIPDIIEEIGVDVPRYNI 342

Query: 207 LTIEKGTLFYKM 218
           LT   GT FY+ 
Sbjct: 343 LTPYPGTPFYEQ 354


>gi|228905538|ref|ZP_04069487.1| Fe-S oxidoreductase [Bacillus thuringiensis IBL 4222]
 gi|228854074|gb|EEM98783.1| Fe-S oxidoreductase [Bacillus thuringiensis IBL 4222]
          Length = 385

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 79/233 (33%), Gaps = 16/233 (6%)

Query: 32  CPYCDFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  C F S        +++ +I+     +          +I  ++  G   SL+  + ++
Sbjct: 79  CTCCGFYSISNLGDKIEDSFYIKEIHDIINDQDNKISDFNIVCLYNDG---SLLVEEELS 135

Query: 91  L--ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLR 146
              ++  I    ++ S  +I IEA  + +     +  R+       I++G +S  ++   
Sbjct: 136 FKVLIYMIQTLNSIDSIEKIVIEAKVNDITEEKLKKIREVTDKAFEITVGFESANQKVRE 195

Query: 147 F-LGRNHNASEAIAAIHLARNIFPRMSFDLI----YALPKQTMTQWEMELQRALSYAVDH 201
             + R          + LA+     +   L+    +    + +  +   L     + ++ 
Sbjct: 196 LCVNRPFTNESFEKKVELAKAYNISIVPLLMVKPAFLSEIEAVEDFVSSLVYLEKFNLER 255

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
           + +   T+ + TL Y +   G     +      +  + Q            IS
Sbjct: 256 IDMELPTVVRDTLNYDLWAKGMYKPITF---WSVIEILQRRAKLDLKVPLYIS 305


>gi|284992297|ref|YP_003410851.1| RNA modification enzyme, MiaB family [Geodermatophilus obscurus DSM
           43160]
 gi|284065542|gb|ADB76480.1| RNA modification enzyme, MiaB family [Geodermatophilus obscurus DSM
           43160]
          Length = 483

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P     +      +     +++ + +QS  +  LR + R +     +  I   R  
Sbjct: 241 TSPHPREFTDDVITAMAETPAVCHQLHMPLQSGSDDVLRRMRRGYRQDRYLGIIDRVRAA 300

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   ++ D+I   P +T   +E  L             +Q +   GT    M
Sbjct: 301 MPDAAITTDIIVGFPGETEADFEQTLDVVRQARFSSAFTFQYSKRPGTPAAGM 353


>gi|117924423|ref|YP_865040.1| radical SAM protein [Magnetococcus sp. MC-1]
 gi|117608179|gb|ABK43634.1| Radical SAM domain protein [Magnetococcus sp. MC-1]
          Length = 525

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 66/224 (29%), Gaps = 24/224 (10%)

Query: 28  CVKKCPYCDFNSHVR-RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C    +V    K  Q   I+S   ++  +      + +               
Sbjct: 191 CPFRCTFC----YVSPSAKSWQGRSIESLFEQLDALIAQYDSKVVYFRDEL-----FFHD 241

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV-----EVNNFQGYRKAGVNRISLGVQSLE 141
           +    I D I      + + +       S            Q   + G + + +G +S  
Sbjct: 242 KQ--RIRDFIRLYRERNYHFKWRASCRASDFGDNFITQEMVQDLAEVGCSCLKMGFESGS 299

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           +  L+ + +         A+  LA+    +++   I   P++T   +   +Q        
Sbjct: 300 DTILKAIKKGIKVKNIQTAVTMLAKQPEIQINCSFIMGFPQETPADYRATMQLINWIRKQ 359

Query: 201 HLSLY-----QLTIEKGTLFYKM-HKDGDLVLPSENVAVDLYNL 238
             + Y        +  G   Y+      D  +P    A     L
Sbjct: 360 ATNFYMVGPQYYRVYPGGALYEEVISQFDYQIPPTLDAWSERYL 403


>gi|291458549|ref|ZP_06597939.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon
           078 str. F0262]
 gi|291419082|gb|EFE92801.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon
           078 str. F0262]
          Length = 460

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 26/211 (12%)

Query: 28  CVKKCPYC------------DFNSHVRRYKVGQEN-FIQSFLTEMQWMR---QLTGPRSI 71
           C + C YC                 +R  +   E  + +  LT +       +  G R  
Sbjct: 156 CGQFCSYCIIPYLRGEIRSRALPDILREVRALSEGGYREIVLTGIHLSSYGMESCGDRER 215

Query: 72  SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-- 129
               F    PS    +++  ++  +A    +      ++E  P  +  +  +        
Sbjct: 216 RERAFNAALPS----ESLLSLIREVASVSGIERVRLGSLE--PRIISRDFVRALSGIPEF 269

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
                L +QS  +++LR + R+++++    +  + R  FP   ++ D+I   P +T   +
Sbjct: 270 CPHFHLSLQSGSDRTLRAMNRHYDSAAFRESAKIIRESFPDAALTTDVIVGFPGETEEDF 329

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
              L+         L +++ +  +GT   +M
Sbjct: 330 SESLRFISEIGFYELHVFKYSRRRGTAAERM 360


>gi|225021202|ref|ZP_03710394.1| hypothetical protein CORMATOL_01214 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945935|gb|EEG27144.1| hypothetical protein CORMATOL_01214 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 526

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 67/198 (33%), Gaps = 16/198 (8%)

Query: 28  CVKKCPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C +C           + R        +Q+ + +      L G +++++       P
Sbjct: 177 CNNTCTFCIVPSLRG--KEIDRRPGDILAEVQALVDQGVVEVTLLG-QNVNAYGVNFADP 233

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
            L   +   + +L    +   +          +P+    +      +      ++ + +Q
Sbjct: 234 GLPRDRSAFSRLLRACGEITGLERVRF--TSPHPAEFTSDVIDAMAETPTVCPQLHMPLQ 291

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R++   + +A +   R   P   ++ D+I   P +T   ++  L     
Sbjct: 292 SGSDKVLKEMRRSYRTKKFLAILDEVRQKIPHAAITTDIIVGFPGETEEDFQATLDVVEK 351

Query: 197 YAVDHLSLYQLTIEKGTL 214
                   +Q +   GT 
Sbjct: 352 ARFTSAFTFQYSPRPGTP 369


>gi|187735351|ref|YP_001877463.1| RNA modification enzyme, MiaB family [Akkermansia muciniphila ATCC
           BAA-835]
 gi|229890497|sp|B2UQE7|MIAB_AKKM8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187425403|gb|ACD04682.1| RNA modification enzyme, MiaB family [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 458

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 71/207 (34%), Gaps = 16/207 (7%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----F 75
           YV     C  KC YC            +   I+  + E++ +    G + ++ +      
Sbjct: 163 YVSIMQGCEMKCAYC---IVPYTRGAERSRPIRDVVDEVKMLAD-AGVKEVTLLGQIVNR 218

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRI 133
           +G    +         +L+ + +   +       +  +P     +  Q   Y     + I
Sbjct: 219 YGRQMETAGGKGGFVQLLEAVHEVEGIRRIRF--VSPHPIGFRQDLVQAFTYLPKLCSHI 276

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
              +QS  ++ L+ + R +     +      +   P +S   D+I   P +T   + +  
Sbjct: 277 HFPMQSGSDRILKMMRRPYRNETYLDLCSRMKQARPDLSITTDIIVGFPGETEEDYLLTR 336

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKM 218
           Q       D+  +++ +  +GT    M
Sbjct: 337 QAVEQVQFDNAFIFRYSPRRGTPAAVM 363


>gi|125975050|ref|YP_001038960.1| radical SAM family protein [Clostridium thermocellum ATCC 27405]
 gi|125715275|gb|ABN53767.1| Radical SAM [Clostridium thermocellum ATCC 27405]
          Length = 441

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC        +   +   +   + ++     +     +         PS     
Sbjct: 168 CPHNCSYCSLKKI--YHNTFRTRPVDEVIKDI---ASMPNKYFVFWDDNFFADPSY---- 218

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
                   +     ++      + A+    +    +  + AG   + LG++S  EQ L+ 
Sbjct: 219 ----TKALLKDLAKLNKKWAAQVTAHSCE-DEELLRLAKSAGCLYLFLGLESFSEQGLKD 273

Query: 148 LGRNHNASEAI-AAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             ++ N  E               +   +++     T   +E  L+      +D ++   
Sbjct: 274 ANKSFNKIEQYGKIADKLHRHGISIQAGIVFGFDSDTPDVFETTLKACNDIGIDGVTASI 333

Query: 207 LTIEKGTLFYKMHKD 221
           LT   GT  Y  +K+
Sbjct: 334 LTPFPGTGIYDQYKN 348


>gi|325295678|ref|YP_004282192.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325066126|gb|ADY74133.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 289

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 66/196 (33%), Gaps = 14/196 (7%)

Query: 23  VHWP-FC--VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           +H   +C   +KC YC F               +    E+    ++     I  +    G
Sbjct: 8   IHVSNYCSFERKCAYCGFAVGTSTEGYFF--LTEKKEKEIITAAKIIEESGIRRVSISAG 65

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             +      +   L+ + K+ ++   + I        +     +  +KAGV+ I   +++
Sbjct: 66  YGNF---YKVLKALELVKKSTSLKVLINIG-----GDLNRERIRMLKKAGVDTICCNLET 117

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
             +   + L  + +    +   +L +     +S  ++  +  +T    E  ++       
Sbjct: 118 TNKNLFKKLKPSDSFKHRLHVCYLVKEEGIELSSGILVGI-GETEKDREQHIEILKKLEP 176

Query: 200 DHLSLYQLTIEKGTLF 215
           + + + +    K T  
Sbjct: 177 EEIPVMRFMPYKETPM 192


>gi|261402156|ref|YP_003246380.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
 gi|261369149|gb|ACX71898.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
          Length = 361

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 73/249 (29%), Gaps = 22/249 (8%)

Query: 23  VHW-------PFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSI 74
           +H        P    KC YC F +   +    +        + +     + +G + +S  
Sbjct: 70  IHITNICHVNP----KCLYCGFAAGTSKEGYYEPFRLTDEAIKKSAIAIEESGIKRVSCS 125

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS 134
              G      + + +   L  + K   +   V          +  ++ +  +K G++ I 
Sbjct: 126 SAHGY-----QGKEVIRALKIVKKYTNLEVLVNAGA-----DLTEDSIKELKKYGIDTIC 175

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
             ++++ E   + +       + I    L       +S  L+  + +    +        
Sbjct: 176 CNLETINENLFKKVKPGEELEDRINVCKLVNKYDIELSTGLLIGIGESYEDRVNHLFYLK 235

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               V  + +      KGT      K   L          L      ITS       E+ 
Sbjct: 236 NELNVGEIPIMGFNPYKGTPMGDHPKCSALEQAKTIAITRLIFPNIRITSPTPTIGAELM 295

Query: 255 NHSFLGAES 263
             + LG  S
Sbjct: 296 QFALLGGAS 304


>gi|126663485|ref|ZP_01734482.1| possible 2-methylthioadenine synthetase [Flavobacteria bacterium
           BAL38]
 gi|126624433|gb|EAZ95124.1| possible 2-methylthioadenine synthetase [Flavobacteria bacterium
           BAL38]
          Length = 447

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 68/198 (34%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C  KC YC   +      + + + ++  L   + +        + + +  G  G      
Sbjct: 154 CDYKCTYC---TIPLARGISRSDTMEGVLKNAKEISAKGIKEIVLTGVNIGDYGKGEFGN 210

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
            ++    LD + +   V     + I    P+ ++    +   K  A V    + +QS   
Sbjct: 211 KKHEHTFLDLVTELDKVEGIERLRISSIEPNLLKNETIELVSKSRAFVPHFHIPLQSGSN 270

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +     +  ++  R + P   +  D+I   P +T   +           + 
Sbjct: 271 DILKKMKRRYLRELYVDRVNKIREVMPHACIGVDVIVGFPGETDEHFLETYHFLNDLDIS 330

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +L ++  +    T   +M
Sbjct: 331 YLHVFTYSERDNTEAAEM 348


>gi|54303313|ref|YP_133306.1| oxygen-independent coproporphyrinogen III oxidase [Photobacterium
           profundum SS9]
 gi|46916743|emb|CAG23506.1| hypothetical oxygen-independent coproporphyrinogen III oxidase,
           Fe-S oxidoreductase [Photobacterium profundum SS9]
          Length = 382

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 8/168 (4%)

Query: 52  IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITI 110
           I +F + MQW++       + S+F   G   + +P ++   +L    +  TV        
Sbjct: 95  IDAFQSAMQWIQ-----GGMDSVFLQDGNSIIFKPSDLQQVLLHLRTQFPTVKRVTTYAR 149

Query: 111 EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
             N   ++ ++ +   +AG+NRI +G++S  +  L  + +     E I A    +     
Sbjct: 150 SKNLYRMKDDDLKMLAEAGLNRIHIGMESGSDPVLELVNKGVTKQEQIIAGQKVKKAGIE 209

Query: 171 MSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           +S   +  L  +  T                D + +  L + +    Y
Sbjct: 210 LSVYYMPGLGGKALTQENALDTADVFNQINPDFIRIRTLAVPQSVELY 257


>gi|266623302|ref|ZP_06116237.1| RNA modification enzyme, MiaB family [Clostridium hathewayi DSM
           13479]
 gi|288864920|gb|EFC97218.1| RNA modification enzyme, MiaB family [Clostridium hathewayi DSM
           13479]
          Length = 446

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 74/225 (32%), Gaps = 21/225 (9%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQEN-FIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       +F S      V +        + E+  + Q T    +  ++    
Sbjct: 155 CDKHCTYCIIPSLRGNFRSVPMERLVSEAQSLADQGVKELILVAQETTLYGVD-LYGKKS 213

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
            P L+  + +  I              EIT E   +    +    Y       I + +Q 
Sbjct: 214 LPELL--KKLCRISGIQWIRIQYCYPEEITDELIQTMKTEDKICHY-------IDMPIQH 264

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             +  LR +GR  + ++    I   R+  P ++    LI   P +T    E+ ++     
Sbjct: 265 ASDTILRRMGRRTSRAQLKEMIGKLRSEIPDIAIRTTLISGFPGETEEDHEILMEFVDEM 324

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             + L ++  + E+ T          L    E     +  L Q I
Sbjct: 325 EFERLGVFAYSAEEDTPAAGFPDQV-LQEVKEERRDAIMELQQEI 368


>gi|255036486|ref|YP_003087107.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Dyadobacter
           fermentans DSM 18053]
 gi|254949242|gb|ACT93942.1| RNA modification enzyme, MiaB family [Dyadobacter fermentans DSM
           18053]
          Length = 489

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 17/229 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENF--IQSFLTEMQ--WMRQLTGPRSISSIFFGGGTP 81
           C   C +C   F    R  +  ++ +  ++      +  +       +++ S  +     
Sbjct: 189 CDNMCSFCVVPF---TRGRERSRDPYSIVKEAEDLFRDGYREVTLLGQNVDSYKWKPEAT 245

Query: 82  S--LIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLG 136
           +   +  + I      +     VS  + I     +P  +        +K       I L 
Sbjct: 246 AEGGLTGETIVNFAHLLEMVAKVSPELRIRFSTSHPKDITDEVLYTMKKYDNICKYIHLP 305

Query: 137 VQSLEEQSLRFLGRNHNAS---EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            QS   + L  + R +      E I AI         +S D+I     +T  +    L  
Sbjct: 306 AQSGNTRVLEIMNRTYTREWYMERIDAIRRILGDECGISQDMIAGFCTETEEEHRDTLSL 365

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                 D   ++  +   GTL  K  KD       +    ++  + Q +
Sbjct: 366 MEYAKFDFGFMFAYSERPGTLAAKKFKDDIPEDVKKRRLAEIIEVQQRL 414


>gi|227495170|ref|ZP_03925486.1| possible tRNA 2-methylthioadenine synthetase [Actinomyces
           coleocanis DSM 15436]
 gi|226831622|gb|EEH64005.1| possible tRNA 2-methylthioadenine synthetase [Actinomyces
           coleocanis DSM 15436]
          Length = 485

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 83/255 (32%), Gaps = 18/255 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + + +  +  +S   +V     C   C +C     V   +  + +      L E+
Sbjct: 128 ESLKVFPSTLPKKADSSYAAWVSISVGCNNTCTFC----IVPHLRGKERDRRPGEVLAEI 183

Query: 60  QWMRQLTG-PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE 118
           + +        ++          S  E    A +L        +          +P++  
Sbjct: 184 EAVVSEGAVEVTLLGQNVNSYGVSFGERDAFAKLLRAAGNIEGLERLRF--TSPHPAAFS 241

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFD 174
            +  +   +    +  + + +QS  ++ LR + R++  ++    +   R + P   ++ D
Sbjct: 242 DDVIRAMAETPTVMPSLHMPLQSGSDRILRMMRRSYRRAKFEGILERVRELIPDAAITTD 301

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD 234
           +I   P +T   ++  L+            +  +   GT    M          ++VA +
Sbjct: 302 IIVGFPGETEEDFQQTLEVVEKARFASAFTFLYSPRPGTPAADMEDQ-----VPDDVAAE 356

Query: 235 LYNLTQSITSAHGLH 249
            Y    ++       
Sbjct: 357 RYKRLLALQEKISFE 371


>gi|17229515|ref|NP_486063.1| hypothetical protein all2023 [Nostoc sp. PCC 7120]
 gi|17131114|dbj|BAB73722.1| all2023 [Nostoc sp. PCC 7120]
          Length = 676

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 81/223 (36%), Gaps = 17/223 (7%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
              C +C  N     Y+    + +   L E   + +  G R    +       ++++  +
Sbjct: 284 KHHCTFCGLNGSGINYRSKSPDRV---LKEFTQLCERYGLRKFQVVD------NILDMNH 334

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           +  ++  +A     + N+    +AN       + Q   +AGV  I  G++S+    L+ +
Sbjct: 335 MNTVIPVLAA-GDEAYNIFYETKANLRW---EHLQQLAQAGVRCIQPGIESMHNSILKLM 390

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT---QWEMELQRALSYAVDHLSLY 205
            + + A   +  +  AR +   + ++++   P ++     +    L           +  
Sbjct: 391 NKGNTAWMNVQLLKWARELGIIVFWNILADFPGESDEWYVEMMEWLPLIAHLQPPSGAS- 449

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
           ++  ++ + +Y+   D  L L        +Y L   I S    
Sbjct: 450 EIRYDRFSPYYERPSDWGLNLSPLRPYKYVYPLAPEILSELAY 492


>gi|310779566|ref|YP_003967899.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
 gi|309748889|gb|ADO83551.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
          Length = 362

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 71/196 (36%), Gaps = 11/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C+K C YC     +RR     E F       ++  R +      S +   G      + +
Sbjct: 60  CIKDCNYCG----IRRSSGNVERFFMDKKDILESARWIYENNYGSLVLQSGER----QDE 111

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
              L ++ + K     S  ++ I  +        ++ +  AG +R  L V++  ++  + 
Sbjct: 112 EFILFVEDVIKEIKELSGGKLGITLSLGEQNRETYKRWFDAGAHRYLLRVETSNKELYKK 171

Query: 148 LG---RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           +      HN    I  +   RNI  ++   ++  LP Q+      +L       VD + +
Sbjct: 172 MHPQDGKHNFENRIICLKELRNIGFQVGTGVMIGLPGQSTEDLVEDLLFYEKLDVDMIGM 231

Query: 205 YQLTIEKGTLFYKMHK 220
               I   T   + ++
Sbjct: 232 GPYIISDETPMGEEYR 247


>gi|304410843|ref|ZP_07392460.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|307304986|ref|ZP_07584736.1| Radical SAM domain protein [Shewanella baltica BA175]
 gi|304350740|gb|EFM15141.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|306912388|gb|EFN42812.1| Radical SAM domain protein [Shewanella baltica BA175]
          Length = 295

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 84/241 (34%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +CD   + +  K  +   +     ++  + +   P  +S +F   G    +    +  
Sbjct: 32  CSFCD--MYTQPQKAFRAQKLDKVEQDILAVARSGAP--VSRVFLADGDAMSLPFARLEA 87

Query: 92  ILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I + I ++   V+      +  N ++         R+ G++ + +G +S +++ L  + +
Sbjct: 88  ICELINRHLPQVTRISSYCLPRNLNNKTPEQLALLRELGLSLLYVGCESGDDEVLAKIQK 147

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLYQLT 208
                 ++AA+   R    + S  ++  L     +        +   +   D+LS   +T
Sbjct: 148 GETFESSLAALLKIRAAGMKSSVMILNGLGGVALSHQHAVNSAKLMNAAQPDYLSTLVVT 207

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
           +  GT        G   LP     + L+    ++     L              S H  N
Sbjct: 208 LPLGTKRMDAVFGGQFQLPD---QMGLFQEMHTLLDHLELEQ--------TIFRSDHASN 256

Query: 269 Y 269
           Y
Sbjct: 257 Y 257


>gi|295109889|emb|CBL23842.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
           obeum A2-162]
          Length = 445

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 24/203 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC        F S      + Q  ++ S  + E+  + Q T   ++      G 
Sbjct: 154 CDKHCTYCIIPSLRGKFRSVPEERLLKQAEYMASQGVRELILVAQET---TVYGTDLYGK 210

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                      L L                +   P  +     Q  +      + + L +
Sbjct: 211 K---------TLHLLLKKLCQIRGIRWIRVLYCYPEEIYDELIQVMKAEPKICHYLDLPI 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   ++ LR +GR  +  + I  I   R   P +     LI   P +T    +  ++   
Sbjct: 262 QHASDKILRRMGRRTSKQQLIDIITKLRREIPDIVLRTSLITGFPGETEEDHQELMEFVD 321

Query: 196 SYAVDHLSLYQLTIEKGTLFYKM 218
               D L ++  + E+GT    M
Sbjct: 322 EMEFDRLGVFTYSPEEGTPAETM 344


>gi|294783742|ref|ZP_06749066.1| BchE/P-methylase [Fusobacterium sp. 1_1_41FAA]
 gi|294480620|gb|EFG28397.1| BchE/P-methylase [Fusobacterium sp. 1_1_41FAA]
          Length = 440

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 15/192 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC   S  + Y    +      L  + ++             F    P+ +  +
Sbjct: 177 CPNKCTYC---SVTKMYSGKNQ------LKNIDFVVSEIKSNKHKKWVF--YDPNFLADK 225

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           + A  ++ + +   +      +   N  + ++   Q  ++AG   + +G++S  +++L  
Sbjct: 226 SYA--INLMNELKKLKIKWTASATINIGN-DIKMLQLMKEAGCIGLVIGLESFIQENLNG 282

Query: 148 LGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  +N  E    +   ++    +   L+  +   T+              VD      
Sbjct: 283 VNKGFNNVKEYKRLVSTIQSYGISVLSTLMIGMETDTVESIRQIPDIIEEIGVDVPRYNI 342

Query: 207 LTIEKGTLFYKM 218
           LT   GT FY+ 
Sbjct: 343 LTPYPGTPFYEQ 354


>gi|187250673|ref|YP_001875155.1| MiaB family RNA modification enzyme [Elusimicrobium minutum Pei191]
 gi|238065353|sp|B2KB59|RIMO_ELUMP RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|186970833|gb|ACC97818.1| RNA modification enzyme, MiaB family [Elusimicrobium minutum
           Pei191]
          Length = 430

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQW----MRQLTGPRSISSIFFGGGTPSL 83
           C  +C YC   +    ++      I +    M+        L    + +      G PSL
Sbjct: 150 CNNRCAYCTIPAIRGPFRSKSMEDIVAEAKAMEKNGVKEISLIAQDTTAYGQDIFGKPSL 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           ++     + + GI             + A P +V  +              + + +Q + 
Sbjct: 210 VKLLKKLVKIKGI--------EWFRIMYAYPETVTKDLLDFIACEPKICRYLDMPLQHIS 261

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R     E  A I L R I P MS   + I   P +T   +E   +       
Sbjct: 262 APVLKAMNRRSTEDEVRAKIKLIRQIVPGMSLRTNFIAGFPGETAEDFEKLKKFIAEAKF 321

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           +++ ++  + E GT    M
Sbjct: 322 NNVGVFAYSKEDGTPAAVM 340


>gi|91202951|emb|CAJ72590.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 447

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 22/197 (11%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGT 80
           C   C YC     V   R +             ++ +    G R I+ +      +G   
Sbjct: 167 CDNYCSYC----IVPYVRGREVSRTIADVEREVLELVSN--GCREITLLGQNINSYGKSL 220

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQ 138
           P  I   ++ + L+GI K   +       + ++P  +  +  +           + +  Q
Sbjct: 221 PGNITLGDLLIELNGIEKLERLR-----FVTSHPKDMSRDLIRTMSQLDKACEYLHMPAQ 275

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  ++ L+ + R + A      I  AR++ P +    D I   P +T   ++  +     
Sbjct: 276 SGSDRILKKMHRGYTAGYYRELIQYARDLMPTIKVAGDFIVGFPGETEEDFQETVCLMED 335

Query: 197 YAVDHLSLYQLTIEKGT 213
               +  +++ +   GT
Sbjct: 336 IRFQNSFIFKYSTRTGT 352


>gi|194334775|ref|YP_002016635.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Prosthecochloris aestuarii DSM 271]
 gi|194312593|gb|ACF46988.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Prosthecochloris aestuarii DSM 271]
          Length = 546

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       + F+ E++    L     +         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KHFVDEIEI---LVKKYDVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +       V   I    + +  + +    YRKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRDLGVTWGINTRVTDIMRDEDLLPFYRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPQTIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|297171740|gb|ADI22732.1| 2-methylthioadenine synthetase [uncultured verrucomicrobium
           HF0500_27H16]
          Length = 439

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C       R +    +F          + +      I+ +  G    S    +
Sbjct: 158 CDFMCTFC--IIPFARGRARSRDFQNLLEEAQNLVARGVRELIITGVNIGTYKHS---GE 212

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK---AGVNRISLGVQSLEEQS 144
            I  I+D +     ++     +IE  P+++    F+  R    A +  + + +Q+  ++ 
Sbjct: 213 GIVDIVDALDDLDGLTRIRISSIE--PTTIPEILFERMRDPSHALLPYLHIPLQAGSDEI 270

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L  + R ++  E +  +  A    P +    DL+   P +T   +    Q  L     + 
Sbjct: 271 LEAMRRKYSVQEFLDFLAKADAAVPDLCIGTDLMVGFPGETDEHFNQTCQTFLDGPFAYC 330

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ++  +   GT   K     D  +P         +L + + +      YE
Sbjct: 331 HVFTYSERNGTPAAKR----DDHVPVPERKRRSAHL-RRLNATRRHDFYE 375


>gi|315586263|gb|ADU40644.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Helicobacter pylori 35A]
          Length = 437

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 16/226 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
            D L  +  +    T      +   L + S  +        + I  
Sbjct: 322 FDTLYSFIYSPRPFTEAGAWKERVPLEISSSRLERLQNRH-KEILE 366


>gi|305681499|ref|ZP_07404306.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Corynebacterium
           matruchotii ATCC 14266]
 gi|305659704|gb|EFM49204.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Corynebacterium
           matruchotii ATCC 14266]
          Length = 531

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLR 146
            + +L    +   +          +P+    +      +      ++ + +QS  ++ L+
Sbjct: 247 FSRLLRACGEITGLERVRF--TSPHPAEFTSDVIDAMAETPTVCPQLHMPLQSGSDKVLK 304

Query: 147 FLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            + R++   + +A +   R   P   ++ D+I   P +T   ++  L             
Sbjct: 305 EMRRSYRTKKFLAILDEVRQKIPHAAITTDIIVGFPGETEEDFQATLDVVEKARFTSAFT 364

Query: 205 YQLTIEKGTL 214
           +Q +   GT 
Sbjct: 365 FQYSPRPGTP 374


>gi|166030495|ref|ZP_02233324.1| hypothetical protein DORFOR_00156 [Dorea formicigenerans ATCC
           27755]
 gi|166029747|gb|EDR48504.1| hypothetical protein DORFOR_00156 [Dorea formicigenerans ATCC
           27755]
          Length = 349

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +R+       + +     +    Q        +    GG       
Sbjct: 64  YCRNDCLYCG----IRKSNAAAHRY-RLDEDTILRCCQEGYNLGFRTFVLQGGEDGYFTE 118

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I  I+  I +++      +  I  +    + +++Q +  AG +R  L  ++   +   
Sbjct: 119 ERIIHIVRRIREHFP-----QCAITLSIGEWKKDSYQAFFDAGADRYLLRHETYNPEHYA 173

Query: 147 FLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +A+     +   ++I  ++    +   P QT      ++          + + 
Sbjct: 174 KLHPPILSAAHRQQCLWDLKDIGYQVGTGFMVGAPYQTPEYLAEDMLFLKELNPHMVGIG 233

Query: 206 QLTIEKGTLFYKMH 219
                  T F    
Sbjct: 234 PFIPHHDTPFADQP 247


>gi|298529707|ref|ZP_07017110.1| MiaB-like tRNA modifying enzyme YliG [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511143|gb|EFI35046.1| MiaB-like tRNA modifying enzyme YliG [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 430

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 65/217 (29%), Gaps = 12/217 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C  +C +C   S   + +   E   IQ     +          S  S  +G         
Sbjct: 145 CNNRCAFCTIPSIRGKLRSRPEHEVIQEAGHLIDQGAGELVLVSQDSTAYGRDLGCRRGL 204

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISLGVQSLEEQ 143
            ++A  L G+     +       +   PS +         + G   V    + +Q    +
Sbjct: 205 SSLAEKLAGLEGLLRLR-----IMYLYPSGLNDGLLARLAELGPPFVPYFDVPLQHANPE 259

Query: 144 SLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ +GR    +  E I  I         +   LI   P +    +   L+      V H
Sbjct: 260 LLKKMGRPFQQDPMEVIRRIRN-YFPGAAIRTTLITGYPGEEERHFRELLEFVRQARVQH 318

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           L ++    E+GT            + +E   + +   
Sbjct: 319 LGVFPFYPEEGTRAAGFPGQIPDEVKNERQRLIMQEQ 355


>gi|283853068|ref|ZP_06370324.1| RNA modification enzyme, MiaB family [Desulfovibrio sp. FW1012B]
 gi|283571535|gb|EFC19539.1| RNA modification enzyme, MiaB family [Desulfovibrio sp. FW1012B]
          Length = 446

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSF----LTEMQWMRQLTGPRSISSIFFGGGTP 81
           C   C YC   F    R+   G    ++         ++ +  L    +   +   G   
Sbjct: 155 CDNYCAYCIVPF-VRGRQKSRGAAAVVEECRNLAERGVREVTLLGQNVNSYGLDASGDGT 213

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           S       A +LD +A    ++     T  ++P  +  +  + +         + L VQS
Sbjct: 214 SF------ARLLDAVAAVPGIARIRFTT--SHPKDLSDDVIERFGSLPQLCPALHLPVQS 265

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSY 197
             ++ LR +GR ++ ++    +   R   P ++   DLI   P +T   ++  L      
Sbjct: 266 GSDRILRRMGRRYDTADYRRLVAKLRRARPDLALTTDLIVGFPGETEADFKETLDLVREV 325

Query: 198 AVDHLSLYQLTIEKGTLFYKM 218
             +    +      GT   ++
Sbjct: 326 RFESGFSFMYGDRPGTASERL 346


>gi|198284261|ref|YP_002220582.1| Radical SAM domain-containing protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218666727|ref|YP_002426923.1| radical SAM domain protein [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248782|gb|ACH84375.1| Radical SAM domain protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518940|gb|ACK79526.1| radical SAM domain protein [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 378

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/255 (11%), Positives = 81/255 (31%), Gaps = 31/255 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ-----------SFLTEMQWMRQLTGPRSISSIFF 76
           C   C YC     + R++    ++                  ++ + + +       +  
Sbjct: 68  CRANCTYCG----LARHREESRDYADRNFIRVDWPTVRVDEMLERIAKNSDKGQFQRMCI 123

Query: 77  GGGTPSLIE-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
                S+I  P +       + +   V+ ++  +I +NP++++  +    +  G +  ++
Sbjct: 124 -----SMITHPDSDHDTQVMLKRWMEVAPHIPASILSNPTTMDKQDLIDLKAMGADIFTV 178

Query: 136 GVQSLEEQSL-----RFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWE 188
            + ++  +       + +   H+  +    I  A  I+   +    LI  +  +T  +  
Sbjct: 179 ALDAVTPEIFERTRGKTVQSPHSWDKYWQTIEWAAEIYGPEKFGAHLICGM-GETEQEIL 237

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              Q+       H  ++    EKG++                +   L +           
Sbjct: 238 AVCQKMKDMG-GHNHMFAFFPEKGSMMEDWDAVPQDHWRRVQLGRFLIDYAGGRYEDMEF 296

Query: 249 HAY-EISNHSFLGAE 262
             Y  + +  +  AE
Sbjct: 297 DQYGRVLSFGYPQAE 311


>gi|148265155|ref|YP_001231861.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
           uraniireducens Rf4]
 gi|229890547|sp|A5G670|MIAB_GEOUR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146398655|gb|ABQ27288.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter uraniireducens
           Rf4]
          Length = 440

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 57/192 (29%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL-IEP 86
           C   C YC     +  Y  G+E   +S    +  +R + G         G    S  ++ 
Sbjct: 159 CENFCSYC-----IVPYVRGREISRRS-ADILGEVRGMAGNGVKEVTLLGQNVNSYGLKS 212

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 +  + +   +     I     +P          + +       I L  QS    
Sbjct: 213 SGEMSFIALLREVSLIPGIERIRFTTSHPKDFSQPLIDCFAEIPKLCRHIHLPAQSGSNA 272

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + R +   E + +I   +   P +    D+I   P +T   ++  L          
Sbjct: 273 VLAAMNRGYTREEYLGSIARLKAACPSIQITGDIIVGFPGETEEDFQATLSLMEEVRYTD 332

Query: 202 LSLYQLTIEKGT 213
           +  +  +    T
Sbjct: 333 VFSFIYSKRPET 344


>gi|319744539|gb|EFV96893.1| biotin synthase [Streptococcus agalactiae ATCC 13813]
          Length = 330

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 9/190 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC  +              Q+ + +   +    G  ++  I   G  PS  E +
Sbjct: 68  CAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGA-NVFCIAMSGTKPSKREIE 126

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  ++  I K+  +    EI + A    ++       ++AG++RI+  + + EE     
Sbjct: 127 QLCQVIPEIKKSLPL----EICLTA--GFLDREQLHQLKQAGIDRINHNLNTPEENY-PN 179

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           +   H+  +    +    N    +    I  +  ++         R        + +  L
Sbjct: 180 IATTHSFKDRCDTLERIHNEDIDVCSGFICGM-GESDEGLITLAFRLKELDPYSIPVNFL 238

Query: 208 TIEKGTLFYK 217
              +GT   K
Sbjct: 239 LAVEGTPLGK 248


>gi|124005536|ref|ZP_01690376.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123988970|gb|EAY28563.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 437

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 68/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C              + ++  +   Q M +      I     + + G    L 
Sbjct: 151 CDRPCSFCA---IPIMRGKHVSHPMEELVKSAQTMAKNGTKELILIAQDLTYYGLD--LY 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           + +N+A ++  +A    +     I ++ A P+   ++     ++     N + + +Q   
Sbjct: 206 KKRNLAELMARLADVEGIEW---IRLQYAYPAGFPLDILDAIKQYPNVCNYLDMPLQHGS 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R     +    I   R   P ++    LI   P +T   +E           
Sbjct: 263 SNVLKLMRRGITREKTEQLIDTIRQKVPEIALRTTLIAGHPGETEADFEEMYTFVEKSRF 322

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D L ++  + E  T  + M
Sbjct: 323 DRLGIFTYSHEDNTHSFTM 341


>gi|117919158|ref|YP_868350.1| biotin synthase [Shewanella sp. ANA-3]
 gi|117611490|gb|ABK46944.1| Radical SAM domain protein [Shewanella sp. ANA-3]
          Length = 359

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 70/192 (36%), Gaps = 17/192 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N  V+RY++  E  + + +  +  +        + ++    G     
Sbjct: 71  CRNHCHYCGLRSKNRQVKRYRLSNEEILSA-VNNIAALG-------LGTVVLQSGDDFSY 122

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + I+ ++  I +   ++      I  +    + +  + +R+AG +R  L +++ +   
Sbjct: 123 SCKRISALISEIKQRHNLA------ITLSLGDRKHHELENWREAGADRYLLKMETFDRAL 176

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
                   +  E IA +   +++  +    +I  LP  T      ++Q      +D L+ 
Sbjct: 177 FARCRPKAHFDERIARLAHLKSLGFQTGSGIIIDLPGMTDAILARDIQCLTELQLDMLAC 236

Query: 205 YQLTIEKGTLFY 216
                   T F 
Sbjct: 237 GPFIAHAQTPFA 248


>gi|312898049|ref|ZP_07757455.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310620874|gb|EFQ04428.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 258

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 3/132 (2%)

Query: 83  LIEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
           ++  +++  ILD     +  ++        A+ +   V   +  ++ G+  I +G++S  
Sbjct: 41  VLPTESLLQILDKCRTAFPSLTRVGAYATAADINRKSVEELKTLKEHGLKIIYIGIESGS 100

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAV 199
           ++ L  + +   A E   A H       ++S  ++  L  Q  T                
Sbjct: 101 DKVLSLINKGVTAHETRLACHKVLEAGMKLSAMILLGLGGQEYTKEHATETASLISDVNP 160

Query: 200 DHLSLYQLTIEK 211
             LS   L I +
Sbjct: 161 TMLSALTLMIPR 172


>gi|115526451|ref|YP_783362.1| radical SAM domain-containing protein [Rhodopseudomonas palustris
           BisA53]
 gi|115520398|gb|ABJ08382.1| Radical SAM domain protein [Rhodopseudomonas palustris BisA53]
          Length = 591

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 75/215 (34%), Gaps = 18/215 (8%)

Query: 32  CPY-CDFNSHV----RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           CPY C F + +    R+ +    + +++ +   Q   Q      I+   F        + 
Sbjct: 214 CPYQCSFCTIINVQGRKSRYRTPDDVEAMVR--QNWAQGISKYFITDDNFARNK----DW 267

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
           + I   L  + +   +     I ++     +  N     ++AGV R+ +G++++   +L 
Sbjct: 268 EAILDRLIWLRETHNIPLGFLIQVDTLCHKI-PNFMAKAKRAGVTRVFIGLENINPANLL 326

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSF-DLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
              +  N      A+ LA      ++    I   P  T      ++        +D +  
Sbjct: 327 TANKRQNKITEYRAMLLAWKDQGIITLAGYILGFPADTPESIRNDIDIIKRELPIDVMEF 386

Query: 205 YQLTIEKGT----LFYKMHKDGDLVLPSENVAVDL 235
           + LT   G+      ++     D  L + ++    
Sbjct: 387 FCLTPLPGSEDHQTLWRNGVAMDPDLNNYDIEHVC 421


>gi|269215580|ref|ZP_06159434.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC
           700122]
 gi|269131067|gb|EEZ62142.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC
           700122]
          Length = 454

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 80/257 (31%), Gaps = 28/257 (10%)

Query: 6   AYENNMTGQGSNSLGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQ---------ENFIQSF 55
           ++  ++          ++     C   C +C    +VR  +  +         E ++   
Sbjct: 144 SFSTDLPSDREKPWSAWLPITVGCDNFCTFC-IVPYVRGRERSRAIEDVVMNAEAYVAEG 202

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
           + E+  + Q              G+P       +  +     +    ++       ++P 
Sbjct: 203 VKEITLLGQNVNSYGRDL----YGSPRF--ADVLKAVAATGVERLRFAT-------SHPK 249

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM-- 171
            +       + +    +  + L VQS  ++ L  + R ++++  +  +   R   P +  
Sbjct: 250 DLTDEVIAAFGELDNLMPALHLPVQSGSDRILEDMNRTYDSAHYLGLVRKLRASCPDIAL 309

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
           S D+I   P +T   ++       S     +  +  +  +GT    M  D    +     
Sbjct: 310 STDVIVGFPGETEEDFQATYDLIESVGYSQVFTFIYSRREGTPAADMFDDTPRDVIQRRF 369

Query: 232 AVDLYNLTQSITSAHGL 248
              +  + +     +  
Sbjct: 370 DRLVELVQRKALEQNRR 386


>gi|206602637|gb|EDZ39118.1| RNA modification enzyme, MiaB family [Leptospirillum sp. Group II
           '5-way CG']
          Length = 483

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 76/214 (35%), Gaps = 12/214 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C   C +C          +      +S L E++ M    G R ++ I          L +
Sbjct: 187 CDHTCSFCA---IPLSRGLQVSRTRESLLEEVRMMAD-EGVREVTLIAQDLTRYGSDLED 242

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            + +  +L+ I K   +       + A P+ V     +  R +   +  + +  Q +   
Sbjct: 243 GEGLPRLLEEIDKIGRIPWVR--LLYAYPTQVTDRLLKVIRDSSTILKYLDIPFQHVSGT 300

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R  N    +  I   R I P ++     I   P +T  ++    +      +DH
Sbjct: 301 VLKRMNRPGNRESTMRLIDRIRRILPDITLRTTFIVGFPGETEEEFLEIEEFLKWSRLDH 360

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + ++  + E+GT  + M       L ++     +
Sbjct: 361 VGVFPFSREEGTPSFDMDGQIPARLKTQRRKRLM 394


>gi|110803355|ref|YP_698962.1| MiaB-like tRNA modifying enzyme YliG [Clostridium perfringens
           SM101]
 gi|123341726|sp|Q0SSE5|RIMO_CLOPS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|110683856|gb|ABG87226.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           perfringens SM101]
          Length = 445

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 18/205 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     F    L  +    +      +  +       +     
Sbjct: 157 CDNFCTYC----IIPKIRGK---FRSRALESIVEEAKKLAENGVKELILIAQDTTNYGID 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           +   + + L+L  +AK   +       +   P ++     +         N + L +Q +
Sbjct: 210 IYGEKKLHLVLRELAKIEGIEWIR--VLYCYPEAIYDELIKEISVNDKVCNYLDLPIQHI 267

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ +GR     E I  I+  R   P +     LI   P ++   +        +  
Sbjct: 268 SNNVLKRMGRKTTKEEIIGKINDLRKNVPNIVLRTSLIVGFPGESCEDFNELKDFIKTIK 327

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGD 223
           +D + ++  + E+GT    M    D
Sbjct: 328 LDKVGVFTYSREEGTPAAIMEDQID 352


>gi|52550491|gb|AAU84340.1| conserved hypothetical protein [uncultured archaeon GZfos9D8]
          Length = 347

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 79/236 (33%), Gaps = 19/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV +C +C F +     K  +E++I S    ++ + +         +  GG TP +   +
Sbjct: 56  CVSRCKFCAFYA-----KSEEESYILSKEEILRKVGETVDVGGTQILIQGGLTPEI-GIE 109

Query: 88  NIALILDGIAKNWT------VSSNVEITIEANPSSVEVNNFQGYRKAGVNRI-SLGVQSL 140
               +   I + +       +S      I  N         +  R+AG++ +   G + L
Sbjct: 110 WFEDLFSAIKRKFPGVQLHSLSPPEIYFIARNEGLSIRETLERLREAGLDSLPGGGAEIL 169

Query: 141 EEQSLRFL--GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  + +   +  +A   I  +  A  +  + +  +++    +        L R     
Sbjct: 170 SDRVRKVISPNKV-SADGWIEVMETAHGMGMKTTATMMFGHI-ERNEDIVEHLFRIRDLQ 227

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
              +          T   K  +  D++    +    L  L  +    H +   + S
Sbjct: 228 NKTVGF--TAFIPWTFQPKNTELYDIIKEPVSATRYLQVLAIARIVLHSVKNIQAS 281


>gi|116753688|ref|YP_842806.1| MiaB-like tRNA modifying enzyme [Methanosaeta thermophila PT]
 gi|116665139|gb|ABK14166.1| MiaB-like tRNA modifying enzyme [Methanosaeta thermophila PT]
          Length = 411

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 77/211 (36%), Gaps = 30/211 (14%)

Query: 28  CVKKCPYC----DFNSHVRRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSIFFGGG 79
           C+  C YC       +   R     E  +   ++    E+Q   Q  G         G  
Sbjct: 131 CLGACAYCIVKRARGTLRSREPHEIEKDVMRLISSGAVEIQLTSQDAGAYGCD---IGAS 187

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVE---VNNFQGYRKAGVNR-IS 134
            P L++      +L        +     I +   NP+SV     +    Y+   + R I 
Sbjct: 188 LPELLD------LLS------DIDGAFMIRVGMMNPNSVLKILDDLLDSYKNEKIYRFIH 235

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           L +QS  ++ L  + R + + + +  +   R+ +P +S   D+I   P ++   + M   
Sbjct: 236 LPLQSGSDRVLERMRRGYTSDDFVNVVSAFRSRYPEISLTTDVITGFPGESDQDFRMTED 295

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
                  D +++ + +    TL + MH   D
Sbjct: 296 VIRITQPDKVNVTRFSRRPHTLAFMMHDMPD 326


>gi|119356260|ref|YP_910904.1| RNA modification protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353609|gb|ABL64480.1| RNA modification enzyme, MiaB family [Chlorobium phaeobacteroides
           DSM 266]
          Length = 446

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 61/222 (27%), Gaps = 18/222 (8%)

Query: 28  CVKKCPYCD--FNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLI 84
           C   C YC   F     R     +   Q+        R++     +I    + G      
Sbjct: 157 CDYGCAYCTIPFARGRSRSFSPDDIIAQASALVASGYREIVLTGVNIGDYRYRGV----- 211

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEE 142
                  +   +     V           P  ++         + +      L +QS  +
Sbjct: 212 ------RLAALLRMLEKVPVARIRISSIEPDILDDALIAVVAASEIIAPHFHLPLQSGSD 265

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             LR + R ++ +     I  A        +S D++   P ++   +    +      + 
Sbjct: 266 AVLRAMCRRYDTAGYRQRILRAVEAIADCSVSSDVMVGYPGESADDYRNMYRFLEGLPIS 325

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            L ++  ++  GT   +        +   +      +    +
Sbjct: 326 SLHVFSCSVRPGTQLAEQVATKKREVVDPDECRQRSSELIKL 367


>gi|322373580|ref|ZP_08048116.1| radical SAM protein, family [Streptococcus sp. C150]
 gi|321278622|gb|EFX55691.1| radical SAM protein, family [Streptococcus sp. C150]
          Length = 314

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 14/207 (6%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 43  CTFCTVSGSGDAIVAPEAPIREQFYHEIDFMHRKWPEVQKYLVYFQNFTNT---HAPLEV 99

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA----GVNRISLGVQSLEEQSLRF 147
           I +   +       V I I   P  +  +      +      V  + LG+Q+  E++   
Sbjct: 100 IKERYEQAINEPGVVGINIGTRPDCLPDDVIDYLAELTECMHVT-VELGLQTTYEETSEL 158

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSL 204
           + R H+    +  +   R   P+  +   LI  LP +T       ++R +    +  + L
Sbjct: 159 INRAHSYDLYVETVKRVRERAPKAEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKL 218

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENV 231
           + L +   T   + + +G L L S+  
Sbjct: 219 HLLHLMTNTRMQRDYHEGRLKLLSQEE 245


>gi|285808553|gb|ADC36074.1| putative 2-methylthioadenine synthetase [uncultured bacterium 164]
          Length = 449

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 70/218 (32%), Gaps = 10/218 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-FGGGTPSLIEP 86
           C + C +C   S        +     S + E + + +      +            L E 
Sbjct: 159 CDRPCAFC---SIPSMRGSFRSRRFGSIVEEARMLARQGVKEVVLIAQDSSRYGEDLGEV 215

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +A ++  I +   +       + A P+ +         +    V  + + +Q      
Sbjct: 216 DALAALIRAIGEIDDLEWVR--VMYAYPTHISDAFLAAVAETPKAVKYLDMPLQHASRNV 273

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R  N       I   R   P ++     I   P +T   +E  ++   +   D++
Sbjct: 274 LKLMKRGGNRGSLERLIERVRERVPGIAIRTTFITGFPGETQEDFEELMEFVRNCRFDNV 333

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            ++  + E+GT  Y +    D  +  +     +    +
Sbjct: 334 GVFTYSDEEGTPAYVLPNKVDPKIAKQRRGRLMKEQAR 371


>gi|258424004|ref|ZP_05686886.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
 gi|257845625|gb|EEV69657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
          Length = 448

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSEYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAARMDDQID 347


>gi|226311213|ref|YP_002771107.1| hypothetical protein BBR47_16260 [Brevibacillus brevis NBRC 100599]
 gi|226094161|dbj|BAH42603.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 592

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 19/246 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC YC     +   + G   F  S     + + +L     + +I F   T ++   +
Sbjct: 192 CPFKCQYC-----LSSIEDGVRYF--SLERVKEDLMRLI-NHGVKTIKFVDRTFNI-NKK 242

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRISLGVQSLEEQS 144
               I   +  N           E     +  +      +    G+ R  +GVQS  +++
Sbjct: 243 YALEIFQFLIDNHN---GTVFQFEITADILRADVLDFLTENAPPGIFRFEIGVQSTNDET 299

Query: 145 LRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
            R + R          +   ++        DLI  LP++    +            + L 
Sbjct: 300 NRLVQRIQRFDRLARTVTQIKDSKKIDQHLDLIAGLPEEDYASFRKTFNDVFGLRPEELQ 359

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
           L  L + +GT       +   V            L  ++ S   +   +          +
Sbjct: 360 LGFLKMLRGTGVRARAANHGYVFMD---EAPYEILGNNVLSFDDMQKIKRVEDILEKYWN 416

Query: 264 LHNLNY 269
            H ++Y
Sbjct: 417 AHRMDY 422


>gi|149924024|ref|ZP_01912407.1| hypothetical protein PPSIR1_11761 [Plesiocystis pacifica SIR-1]
 gi|149815107|gb|EDM74660.1| hypothetical protein PPSIR1_11761 [Plesiocystis pacifica SIR-1]
          Length = 684

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 11/192 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +CV +C +C+F  +V         ++ S     +  R+      I  +  GG  P  +  
Sbjct: 390 YCVTRCKFCNF--YVPPTDKQGRGYVLSKEQLAKKFRETEALGGIQILLQGGLNPE-LGL 446

Query: 87  QNIALILDGIAKNWTVSSNVEITIE----ANPSSVE-VNNFQGYRKAGVNRI-SLGVQSL 140
                +     +N+T+  +     E    A    +      +  + AG++ +   G + L
Sbjct: 447 DYYEDLFRWTKQNFTLKLHALSPTEIIHIAQIEELSVEEVLRRLQAAGMDSLPGGGAEIL 506

Query: 141 EEQSLRFLGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +++    +    N+ +E +  +  A  +  R S  +++    +T     M L+R  S   
Sbjct: 507 DDEIRARISPFKNSTAEWLEVMRAAHGLGMRSSATMVFGFQ-ETAEHILMHLERLRSLQD 565

Query: 200 DHLSLYQLTIEK 211
           +           
Sbjct: 566 ETGGFTAFITWP 577


>gi|223040820|ref|ZP_03611086.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter rectus
           RM3267]
 gi|222877919|gb|EEF13034.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Campylobacter rectus
           RM3267]
          Length = 436

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 30/233 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C KKC YC     +  +  G E  I + L  ++ +++     +      G          
Sbjct: 153 CDKKCTYC-----IVPHTRGDEISIPANL-ILREVKKAAESGAKEIFLLGQNV------N 200

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-----------NPSSVEVNNFQGYRKAG--VNRIS 134
           N      G  +    S  +    E            +P  ++    + + +       + 
Sbjct: 201 NYGKRFSGAHEKIDFSDLLVKISEIKGVERIRFTSPHPLHMDDKFLEIFSQNPKICKSMH 260

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQ 192
           + +QS   + LR + R +     +       A      +S D+I A P ++  ++E  + 
Sbjct: 261 MPLQSGNTKVLREMKRGYTKEWFLDRAAKLRAMCPEVSISTDIIVAFPGESDEEFEDTMD 320

Query: 193 RALSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSI 242
                  + +  ++ +    T    F     D         +      +   I
Sbjct: 321 VLEKVRFEQIFSFKYSPRPLTKAAEFTNQIPDSLASARLTRLQSRHNEILDEI 373


>gi|95931189|ref|ZP_01313911.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684]
 gi|95132751|gb|EAT14428.1| conserved hypothetical protein [Desulfuromonas acetoxidans DSM 684]
          Length = 453

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 80/238 (33%), Gaps = 27/238 (11%)

Query: 8   ENNMTGQGSNSLGVYVHW-------PF----------CVKKCPYCDFNSHVRRYKVGQEN 50
           +  +    +N   +Y H        PF          C   C YC      +   + +  
Sbjct: 122 QQQINATSANPQALYDHLTPRAKASPFYSAYVKIAEGCSNHCSYC---IIPKLRGMLRSR 178

Query: 51  FIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT 109
            I S + E+Q  +++     ++ +           +   +  +L  + K   +S      
Sbjct: 179 SIDSIVQEVQKLVKEGVKEVNLIAQDITAFGQDRSDGATLEELLQELVKIEDLSWLR--L 236

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + A P  +               N + L +Q + +  L  + R  +A ++   I   R  
Sbjct: 237 LYAYPDGISNELIDLIASEDKICNYLDLPLQHINDDILSMMNRRIDAQDSRQLISRLRER 296

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
            P M+     I   P +T  Q++  L+       D + +++ + E+GT    +    D
Sbjct: 297 IPDMTLRTSFIVGFPGETDAQYQQLLEFVEEGHFDRVGVFRYSREEGTAAANLDNQVD 354


>gi|326335995|ref|ZP_08202171.1| 2-methylthioadenine synthetase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691792|gb|EGD33755.1| 2-methylthioadenine synthetase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 438

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 73/234 (31%), Gaps = 19/234 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC          + + + I++ L   + + +      + + +  G    G   +
Sbjct: 152 CDYKCTYCA---IPMARGISRSDTIENILKNAKKISENNIKEIVLTGVNIGDYGKGEFGN 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
                    ++  +     +      +IE  P+ ++          ++ V    + +QS 
Sbjct: 209 KKHEHTFLELIQALDTVEGIERLRISSIE--PNLLKDETIAFVAQSRSFVPHFHIPLQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +        +   +   P   +  D+I   P +T   +           
Sbjct: 267 SNDILKKMKRRYLRELYQNRVAKIKEEMPDACIGVDVIVGFPGETDEHFLETYHFLNELD 326

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           + +L ++  +    T   KM            +      + + +++    + YE
Sbjct: 327 ISYLHVFTYSERDNTEAVKMEGVV-----PSEIRAKRSRMLRGLSAKKRHYFYE 375


>gi|262341116|ref|YP_003283971.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
           synthetase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272453|gb|ACY40361.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
           synthetase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 446

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 10/213 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFG-GGTPSLIE 85
           C  KC YC            +   I++ L  ++ + R       ++ +  G  G     E
Sbjct: 153 CDYKCSYC---IIPISRGASRSESIENILKNIRLLFRNGVKEIVLTGVNIGDYGKKIYGE 209

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRK--AGVNRISLGVQSLEE 142
            + +    D I     +     I +    P+ ++    +   K    V    + +QS   
Sbjct: 210 NRRLYTFFDLIQAIDQIKEKGRIRLSSIEPNLLKNECIEFLSKSKHFVPHFHIPLQSGSN 269

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R +        ++  R   P   +  D+I   P +T   +           + 
Sbjct: 270 DILGKMHRRYKRELYQEKVNKIRCFIPDAYIGSDIIVGFPGETHKHFLETYHFLKKLEIS 329

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV 233
            L ++  +    T    +       +  +   +
Sbjct: 330 SLHIFTYSPRPNTKSITLQGYVSKKIQWKRNQI 362


>gi|269219570|ref|ZP_06163424.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210812|gb|EEZ77152.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 496

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 74/232 (31%), Gaps = 17/232 (7%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + L  + + +  +  ++   +V     C   C +C     V   +  + +  +     + 
Sbjct: 128 ESLKVFPSTLPTRRESAFAAWVSISVGCNNTCTFC----IVPHLRGKERD--RRPGEVLA 181

Query: 61  WMRQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPSS 116
            +  +    +I     G    S       +   A +L    +   +          +P++
Sbjct: 182 EVEAVVSEGAIEVTLLGQNVNSYGVGFGDRQAFAKLLRACGEIEGLERVRF--TSPHPAA 239

Query: 117 VEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMS 172
                     +    +  + + +QS  ++ LR + R++ +S  +  +    AR     ++
Sbjct: 240 FSDEVIAAMAETPSVMPSLHMPLQSGSDRVLRAMRRSYRSSRFLGILDRVRARMPEAAIT 299

Query: 173 FDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDL 224
            D+I   P +T   +E  L             +  +   GT    M    D 
Sbjct: 300 TDVIVGFPGETDEDFEATLDVVERSRFASAYTFIYSPRPGTPAADMDNQVDP 351


>gi|226227038|ref|YP_002761144.1| hypothetical protein GAU_1632 [Gemmatimonas aurantiaca T-27]
 gi|226090229|dbj|BAH38674.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 356

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 21/183 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C +C F    +  +    ++ +    +++  + L G   +  +  GG  P  I  +
Sbjct: 47  CVADCGFCAFYRRPKNGEGYTLSY-EQIGDKIEETKALGG---VQILIQGGHNP-YIPFE 101

Query: 88  NIALILDGIAKNWTVSSNVEITIE-----ANPSSVEVNNFQGYRKAGVNRISLG-----V 137
               ++  I ++  +  +     E             +  +  + AG++ I  G     V
Sbjct: 102 WYLDLMRYIKRHHPIHIHGFSPSEVDFFATRFRMDARDVIRELKAAGLDSIPGGGGEILV 161

Query: 138 QSLEE-QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           Q + +  + +  G    A   +  + LA N   + S  ++Y +  +T+ +    LQR   
Sbjct: 162 QRVRDIAAPKKAG----ADRWLEIMELAHNEGMKTSVTMMYGI-GETLAERIEHLQRVRD 216

Query: 197 YAV 199
              
Sbjct: 217 LQA 219


>gi|218288632|ref|ZP_03492909.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241289|gb|EED08464.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 475

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C     +   R  +         L   +  R       ++ I  GG       
Sbjct: 153 CNNFCTFC----IIPRARGLIRSRKPENVVLQATKLARAGYREIVLTGIHTGGYGEDFEN 208

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            +   L+LD    +      +     +      ++     +K  V  + + +Q+  +  L
Sbjct: 209 YRLADLLLDLERIDLPFRIRISSIEASEIDDRLMDVLAASKKV-VPHLHIPLQAGSDPVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R + R++  +E    +   R   P ++   D+I   P +T  Q+E       +     L 
Sbjct: 268 RRMHRHYTTAEYAEKLQELRRRLPDLAVTTDVIVGFPGETDEQFEETYAFVRAQGYAQLH 327

Query: 204 LYQLTIEKGTLFYK 217
           ++  +  +GT  YK
Sbjct: 328 VFPYSPRRGTAAYK 341


>gi|195330093|ref|XP_002031743.1| GM26169 [Drosophila sechellia]
 gi|194120686|gb|EDW42729.1| GM26169 [Drosophila sechellia]
          Length = 583

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 37/114 (32%), Gaps = 4/114 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P        +  R       ++ L  QS   Q L  + R ++    +  +   R  
Sbjct: 352 TSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQF 411

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMH 219
            P +    D I     +T  +++           +   L+  ++ + T  ++ +
Sbjct: 412 LPDVGLSSDFICGFCGETEEEFQDTESLIQQVQYNVAYLFAYSMREKTTAHRRY 465


>gi|313217015|emb|CBY38208.1| unnamed protein product [Oikopleura dioica]
          Length = 1477

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        +  +  F    +         S  +  +G    +   
Sbjct: 63  CLNSCTYCK-TKHARGDLASYPIDEIVARFEQAFEQGIVEVWLTSEDTGAYGRDIGT--- 118

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
             NI  +L+ + K       + I +  NP  + + + +G  K        + + + VQS 
Sbjct: 119 --NIVELLNAVVKTIPEGCMMRIGM-TNPPYI-LEHLEGIAKILNHPRVYSFLHVPVQSG 174

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +N  +    +   R   P  +   D+I   P +T   ++  +     Y 
Sbjct: 175 SDAVLNSMRREYNREDFCKVVDTLRANVPDCNIATDIIAGFPTETEEDFDETISLCEKYK 234

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
              L + Q     GT   K 
Sbjct: 235 FPSLFMNQFFPRPGTPAAKW 254


>gi|150025462|ref|YP_001296288.1| hypothetical protein FP1403 [Flavobacterium psychrophilum JIP02/86]
 gi|238065358|sp|A6GZF6|RIMO_FLAPJ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|149772003|emb|CAL43479.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 433

 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 68/199 (34%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                I+  + E + + +      I     + + G    L 
Sbjct: 148 CDRPCSFCA---IPLMRGKNVSQTIEKLVKEAEGLAKNGVKELILIAQDLTYYGLD--LY 202

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + + +  +L+ + K   +         A P+   ++  +  ++     N I + +Q + +
Sbjct: 203 KKRALGELLEALVKIEGIEWIRLHY--AFPTGFPMDVLEIMKREPKICNYIDIPLQHISD 260

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R     +    +    A      +   LI   P +T   +E+  +       D
Sbjct: 261 SILKSMKRGTTREKTTKLLKDFRAAVPGMAIRTTLIVGYPGETEEDFEILKEFVQEMKFD 320

Query: 201 HLSLYQLTIEKGTLFYKMH 219
            +  +  + E+ T  Y++ 
Sbjct: 321 RMGCFAYSHEENTGAYELV 339


>gi|254778972|ref|YP_003057077.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori B38]
 gi|254000883|emb|CAX28819.1| Putative tRNA-i(6)A37 modification enzyme MiaB [Helicobacter pylori
           B38]
          Length = 437

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGARF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|309789573|ref|ZP_07684154.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Oscillochloris trichoides DG6]
 gi|308228309|gb|EFO81956.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Oscillochloris trichoides DG6]
          Length = 554

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 24/197 (12%)

Query: 22  YVHWP------------FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR 69
           Y++ P             C   C +C      RRY+          +  +  +  L    
Sbjct: 186 YIYVPMNVRVAVPNFARGCPFTCRFCSQWKFWRRYRARNP------MKFVDEVETLVRDH 239

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN--FQGYRK 127
            +         P+ +  +    + + +AK       V   I    + +  +      +RK
Sbjct: 240 KVGFFILADEEPT-LNRKKFTALCEELAKRKL---PVLWGINTRVTDIMRDKALLPLWRK 295

Query: 128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQW 187
           AG+  ISLG ++  + +L    +     +   AI L ++         I  +  +T    
Sbjct: 296 AGLIHISLGTEAAAQMNLEIFRKQTTIDQNKEAIKLIQDAGMVAEAQFIMGMEAETPETI 355

Query: 188 EMELQRALSYAVDHLSL 204
           E   Q A  + VD  + 
Sbjct: 356 EETYQYARDWKVDMANW 372


>gi|254810661|sp|Q728P5|BIOB_DESVH RecName: Full=Biotin synthase
          Length = 362

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 15/219 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLI 84
           C + C +C  +SH             ++ L   + +RQ    R        G     + +
Sbjct: 105 CPEDCAFCAQSSHHATGSPVHALLDAETLLRRAEELRQSGAER-------YGIVTSGTRL 157

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +A + +   +   +     I +  +   +  +     ++AG +     +++     
Sbjct: 158 TVRELATLCEAAVR---IRRETGIALCGSLGQLTPDAAACLKEAGFSSYHHNLET-SRSF 213

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +   H   + IA +  AR    R     I+ +  +T  Q            VD + +
Sbjct: 214 FPAICSTHAYDDDIATVRAARAAGLRTCSGGIFGM-GETDAQRIELSATLRELDVDSIPV 272

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L+   GT          +          L +  + I 
Sbjct: 273 NLLSPIPGTPLQHRPTMPPMRALVSIAIYRLMHPARDIL 311


>gi|311234649|gb|ADP87503.1| biotin synthase [Desulfovibrio vulgaris RCH1]
          Length = 361

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 15/219 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLI 84
           C + C +C  +SH             ++ L   + +RQ    R        G     + +
Sbjct: 104 CPEDCAFCAQSSHHATGSPVHALLDAETLLRRAEELRQSGAER-------YGIVTSGTRL 156

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +A + +   +   +     I +  +   +  +     ++AG +     +++     
Sbjct: 157 TVRELATLCEAAVR---IRRETGIALCGSLGQLTPDAAACLKEAGFSSYHHNLET-SRSF 212

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +   H   + IA +  AR    R     I+ +  +T  Q            VD + +
Sbjct: 213 FPAICSTHAYDDDIATVRAARAAGLRTCSGGIFGM-GETDAQRIELSATLRELDVDSIPV 271

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L+   GT          +          L +  + I 
Sbjct: 272 NLLSPIPGTPLQHRPTMPPMRALVSIAIYRLMHPARDIL 310


>gi|195584188|ref|XP_002081896.1| GD25482 [Drosophila simulans]
 gi|194193905|gb|EDX07481.1| GD25482 [Drosophila simulans]
          Length = 556

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 87/258 (33%), Gaps = 28/258 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++                S  +  +G    S + 
Sbjct: 221 CLNQCTYCK-TKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSL- 278

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I +N  +   +      NP  + + + +   K        + + + VQS 
Sbjct: 279 PELLWKLVEVIPENCMLRVGM-----TNPPYI-LEHLEEVAKVMQHPRVYSFLHVPVQSG 332

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +   +    +   R   P ++   D+I   P +T   +E  +     Y 
Sbjct: 333 SDSVLGEMKREYCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEDDFEETMTLCAKYR 392

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-----EI 253
              L + Q     GT   KM +    ++      +     +    +      Y     E+
Sbjct: 393 FPSLFINQFFPRPGTPAAKMERIPANLVKKRTKRLTDLFYSYEPYAERVGEIYTVLVTEV 452

Query: 254 SNH--SFLGAESLHNLNY 269
           S+    ++G    HN +Y
Sbjct: 453 SHDKLHYVG----HNKSY 466


>gi|195335207|ref|XP_002034266.1| GM19985 [Drosophila sechellia]
 gi|194126236|gb|EDW48279.1| GM19985 [Drosophila sechellia]
          Length = 556

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 87/258 (33%), Gaps = 28/258 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++                S  +  +G    S + 
Sbjct: 221 CLNQCTYCK-TKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSL- 278

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I +N  +   +      NP  + + + +   K        + + + VQS 
Sbjct: 279 PELLWKLVEVIPENCMLRVGM-----TNPPYI-LEHLEEVAKVMQHPRVYSFLHVPVQSG 332

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +   +    +   R   P ++   D+I   P +T   +E  +     Y 
Sbjct: 333 SDSVLGEMKREYCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEDDFEETMTLCAKYR 392

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-----EI 253
              L + Q     GT   KM +    ++      +     +    +      Y     E+
Sbjct: 393 FPSLFINQFFPRPGTPAAKMERIPANLVKKRTKRLTDLFYSYEPYAERVGEIYTVLVTEV 452

Query: 254 SNH--SFLGAESLHNLNY 269
           S+    ++G    HN +Y
Sbjct: 453 SHDKLHYVG----HNKSY 466


>gi|124006098|ref|ZP_01690934.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123988275|gb|EAY27928.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 438

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 70/230 (30%), Gaps = 18/230 (7%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGG---GTPSLIEPQ 87
           C Y C F +        + + I+     +       G   +  +   G   G   + E +
Sbjct: 151 CNYNCSFCTIPLARGKSRSDSIE----NIIASAHKIGQTEVKEVVLTGVNIGDFGIQEGR 206

Query: 88  NIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQ--GYRKAGVNRISLGVQSLEEQS 144
                +D +     V     I I    P+ +  +        K  V    + +QS   + 
Sbjct: 207 RKERFIDLVKALDEVDGLERIRISSIEPNLLSNDVIAFTAQSKRFVPHFHIPLQSGSNKI 266

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +     +  ++  + + P   +  D+I   P +T   +           + +L
Sbjct: 267 LKAMRRRYERGLYVDRVNKIKELMPHCCIGVDVIVGFPGETEEDFLDTYNFLNELDISYL 326

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
            ++  +    T     H      +  +        +   ++     + YE
Sbjct: 327 HVFTYSERANT-----HALEIKSVVPKEERAKRSKMLHILSDKKRRYFYE 371


>gi|126459773|ref|YP_001056051.1| RNA modification protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249494|gb|ABO08585.1| RNA modification enzyme, MiaB family [Pyrobaculum calidifontis JCM
           11548]
          Length = 440

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 93/281 (33%), Gaps = 42/281 (14%)

Query: 21  VYVHWP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFL--TEMQWMRQLT--GPRSI-- 71
           VYV  P    C+  C +C       +Y  G   +++S      ++ +++    G R I  
Sbjct: 116 VYV-VPLQVGCLGNCTFC-----ATKYTRGGAGYVKSADPDEVIRHVKKAVEGGAREIYL 169

Query: 72  --SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE--VNNFQGY-- 125
               +   G          +  +L+ + +       V I +   P   E   +       
Sbjct: 170 TGQDVITYGFDARWRSGWTLPDLLERLLREVDGEYRVRIGMS-EPWVFERFADQILDIVK 228

Query: 126 RKAGVNR-ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR---MSFDLIYALPK 181
           R   V R   L VQS  ++ L+ +GR +   E    I   R +      ++ D+I   P 
Sbjct: 229 RDRRVYRYFHLPVQSGSDRVLKAMGRRYTVDEYKELIRKIRRVLGEPVFIATDIIVGFPG 288

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           +    +   ++       D + + + +    T    M +     +P          L++ 
Sbjct: 289 EEWEDFLATVKLVEELQFDKVHVARFSPRPFTEAAVMPR----QVPDAEKKRRSKILSEV 344

Query: 242 ITSAHGLHAYEISNHSFLGAESL-------HNLNYWRYGDY 275
                 L      N + +G+  +       H L   R GDY
Sbjct: 345 ALRVAHLR-----NGARVGSRDVVLITEVDHGLVVGRAGDY 380


>gi|306819660|ref|ZP_07453323.1| MiaB family RNA modification enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304552305|gb|EFM40233.1| MiaB family RNA modification enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 438

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 66/200 (33%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     ++   + E+    +    +++  I       S     
Sbjct: 154 CDNSCTYC----IIPKLRG---RYVSRPMEEIVEEAKRLASQNVKEIVLIAQDTSKYGLD 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +   + +  +L  ++K   +     +     P  +     Q  +      +   + +Q  
Sbjct: 207 IYGEKKLPNLLRELSKIEGIRWIRFLY--TYPEDITDELVQEVKNNDKVCSYFDIPIQHA 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ + R+ +  E    I+L R+      +   LI   P ++    +          
Sbjct: 265 SNRILKLMNRSTDRQEISDKINLIRSNIKDAIIRTTLITGFPTESQEDIDELADFVRQMK 324

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D L ++  + E+GT    M
Sbjct: 325 FDKLGVFPYSREEGTKAGNM 344


>gi|294790986|ref|ZP_06756144.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Scardovia inopinata
           F0304]
 gi|294458883|gb|EFG27236.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Scardovia inopinata
           F0304]
          Length = 483

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/226 (11%), Positives = 72/226 (31%), Gaps = 10/226 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C   S   + +  +  + +      +    +       +   +G    S  + 
Sbjct: 186 CNNTCTFCIVPSVRGKERDRRPGDILDEIQRCVDAGAKEITLLGQNVNSYGY---STGDR 242

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
              + +L    K   +          +P++   +  +   +    ++++ + +QS  ++ 
Sbjct: 243 YAFSKLLRACGKIDGLKRVRF--TSPHPAAFTDDVIEAMAETDNVMHQLHMPLQSGSDRI 300

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R++  S     I    A     +++ D+I   P +T   ++  +           
Sbjct: 301 LRAMRRSYRVSRFKGIIDKVRAAMPDAQITTDIIVGFPGETEDDFQQTMDLLRQIRFSSA 360

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
             ++ +   GT    M +    V+      +     T +       
Sbjct: 361 YTFEYSPRPGTPAALMEQIPPEVMRDRYTRLHDMQETITAQEMQKF 406


>gi|258516898|ref|YP_003193120.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780603|gb|ACV64497.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 338

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 14/190 (7%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C    C +C    +V+     Q+  +       + +  L   R I       G   ++  
Sbjct: 28  CSHNACTFCGMYRNVKFRIRKQDEILDQIN---RAVLYLPHARKIFLAD---GNALVLPA 81

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAGVNRISLGVQSLEEQ 143
             +  I+  +  +        I+    P+ +    ++     + AG+  I LG++S + +
Sbjct: 82  GKLLNIMQLL--HLNFPRLTRISCYGGPNDILNKSLDELVALKNAGLKIIYLGLESGDGE 139

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDH 201
            L  + +    +E I A         ++S  +I  L     ++   +             
Sbjct: 140 VLSEINKGATPAEMIEAGQRVMAAGIKLSLMIILGLGGKKHSVNHAQNTALAINKINPYM 199

Query: 202 LSLYQLTIEK 211
           LS   L ++K
Sbjct: 200 LSTLTLMLQK 209


>gi|328907278|gb|EGG27044.1| RNA modification enzyme, MiaB family [Propionibacterium sp. P08]
          Length = 493

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 144 ESLITFPSNLPTRRDSAYSAWVSISVGCNNTCTFC----IVPQLRGRETDRRPGEILSEI 199

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 200 RALVDEGVQEVTLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 250

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 251 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 310

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 311 DAAITTDIIVGFPGETDKDFAETMRVVAESKFSAAFTFQYSIRPHTP 357


>gi|313837164|gb|EFS74878.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL037PA2]
 gi|314927814|gb|EFS91645.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL044PA1]
 gi|314971937|gb|EFT16035.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Propionibacterium acnes
           HL037PA3]
          Length = 490

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQ-ENFIQSFLTEM 59
           + L  + +N+  +  ++   +V     C   C +C     V + +  + +      L+E+
Sbjct: 141 ESLITFPSNLPTRRDSAYSAWVSISVGCNNTCTFC----IVPQLRGRETDRRPGEILSEI 196

Query: 60  QWMRQ--------LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE 111
           + +          L    +   + FG       +    A +L        +         
Sbjct: 197 RALVDEGVQEVTLLGQNVNSYGVQFG-------DRGAFAKLLRACGNIDGLERVRF--TS 247

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
            +P++   +  +   +    +  + + +QS  ++ LR + R++ +++ +  +   R   P
Sbjct: 248 PHPAAFTDDVIEAMAETPNVMPSLHMPLQSGSDEVLRRMRRSYRSTKFLGILDRVREAIP 307

Query: 170 R--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
              ++ D+I   P +T   +   ++            +Q +I   T 
Sbjct: 308 DAAITTDIIVGFPGETDKDFAETMRVVAESKFSAAFTFQYSIRPHTP 354


>gi|188996545|ref|YP_001930796.1| biotin synthase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|254811594|sp|B2V8G9|BIOB_SULSY RecName: Full=Biotin synthase
 gi|188931612|gb|ACD66242.1| biotin synthase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 333

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 63/203 (31%), Gaps = 17/203 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF----IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C  +SH   YK     +        L   +    +   R    +         
Sbjct: 65  CTEDCSFCAQSSH---YKTPINAYGLVSKDEMLAGAEKAVAINANRYCIVVSGRKA---- 117

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I D I +   +     I +  +  +V+  +    + AGV+RI+  +++  E+
Sbjct: 118 -SKEEVDKIADAIKE---IKKTYPIKVCCSLGTVDEKDLDKLKVAGVDRINHNLET-SEK 172

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               +   H   E    I   + +        I+ +  ++               VD + 
Sbjct: 173 YFSKIVSTHTWKERYKTIKKIQKVGLSTCTGGIFGM-GESDEDIIDLAMTYRDLEVDSIP 231

Query: 204 LYQLTIEKGTLFYKMHKDGDLVL 226
           L  L    GT     H    L  
Sbjct: 232 LNFLIPIPGTPLGDKHNLTPLRC 254


>gi|138894501|ref|YP_001124954.1| Mg-protoporphyrin IX monomethyl ester oxidativecyclase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134266014|gb|ABO66209.1| Mg-protoporphyrin IX monomethyl ester oxidativecyclase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 597

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 4/126 (3%)

Query: 108 ITIEANPSSVEVNNFQGY---RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
              E     +     +        G+ R  +GVQS  ++  R + R  N ++    + + 
Sbjct: 262 FQFEITADIMRPEVIEFLNNEAPPGLFRFEIGVQSTNDEVNRLIMRKQNFAKLSRTVTMI 321

Query: 165 RNIFPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +         DLI  LP++    +        +   + L L  L + +GT       +  
Sbjct: 322 KEGGKITQHLDLIAGLPEEDYDSFRKTFNDVFALRPEELQLGFLKLLRGTGLRLRAHEYG 381

Query: 224 LVLPSE 229
            V    
Sbjct: 382 YVYMDH 387


>gi|159185331|ref|NP_355629.2| hypothetical protein Atu2694 [Agrobacterium tumefaciens str. C58]
 gi|159140586|gb|AAK88414.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 424

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 19/203 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C  +C +C     +  Y  G    +      +   R+LT       +  G    S    +
Sbjct: 147 CDHRCTFC-----IIPYGRGNSRSVP-MGAVVDQARRLTESGYCEIVLTGVDATSYGADL 200

Query: 85  EPQ-----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             +         +L  +     +  +   +IEA+   ++           +  + L +Q 
Sbjct: 201 PGEPSLGYLAKTLLKQVPDIIRLRLSSIDSIEADHHLMD---LIADEPRFMPHLHLSLQH 257

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSY 197
            ++  L+ + R H  ++AI   +  R++ P +    D+I   P +T    E     A   
Sbjct: 258 GDDMILKRMKRRHLRADAIRFCNEVRSLRPDIAFGADMIAGFPTETEEMLENAATLAEEC 317

Query: 198 AVDHLSLYQLTIEKGTLFYKMHK 220
            +  L ++  +  +GT   +M +
Sbjct: 318 GISSLHVFPYSPREGTPAVRMPQ 340


>gi|315925622|ref|ZP_07921832.1| biotin synthase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621163|gb|EFV01134.1| biotin synthase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 322

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 66/198 (33%), Gaps = 13/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C + C +C  ++H          +    L   + ++Q         + +     S   + 
Sbjct: 61  CSENCKFCAQSAH---NHACAAQY--PLLPTEEILKQAQTNHDQGVLRYS-IVTSGKRLS 114

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              +  + + + +   +   V I++  +   +    F+  ++AGV R+   +++      
Sbjct: 115 DAEVDQMCETVRE---IKEKVGISVCVSFGLLNEQQFRKLKEAGVTRVHNNLETSRRNF- 170

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H   + + AI  A+     +    I  L  +T+              V+ + + 
Sbjct: 171 PNICTTHIFDDKVQAIKAAQAAGLSVCSGGIMGL-GETVEDRIDMALTLRELGVESVPVN 229

Query: 206 QLTIEKGTLFYKMHKDGD 223
            L    GT F    +  D
Sbjct: 230 MLNPIPGTPFGNNVRLTD 247


>gi|160892633|ref|ZP_02073423.1| hypothetical protein CLOL250_00163 [Clostridium sp. L2-50]
 gi|156865674|gb|EDO59105.1| hypothetical protein CLOL250_00163 [Clostridium sp. L2-50]
          Length = 483

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 63/195 (32%), Gaps = 16/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   Q     ++ +++L+       +  G    S    +
Sbjct: 202 CNNFCTYC-----IVPYVRGRERSRQP-EDIIREVKRLSEEGVKEIMLLGQNVNSYGKTL 255

Query: 85  E-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E P   A +L  + +   +       + ++P  +                 I L +QS  
Sbjct: 256 EKPMTFAELLQKVTEVDGIERVRF--MTSHPKDLSDELIDVIAANEKICRHIHLPMQSGS 313

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R +     +  +   R   P +S   D+I   P +T   +   +        
Sbjct: 314 SRILNQMNRRYTKESYLELVDKIRRQIPEISLTTDIIVGFPGETEEDFLETMDVVNRVRF 373

Query: 200 DHLSLYQLTIEKGTL 214
           D    +  +   GT 
Sbjct: 374 DTAFTFIYSKRTGTP 388


>gi|160892570|ref|ZP_02073360.1| hypothetical protein CLOL250_00099 [Clostridium sp. L2-50]
 gi|156865611|gb|EDO59042.1| hypothetical protein CLOL250_00099 [Clostridium sp. L2-50]
          Length = 438

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 11/221 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC       +Y+      + +   E+                  G    L   +
Sbjct: 151 CGKMCTYCAIPYIRGKYRSIPMEQLLASAKELAAQGVKELILVAQETTLYGVD--LYGEK 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +L  + K   +       +   P  +         +     + + + +Q  E+  L
Sbjct: 209 TLPKLLHELCKIEEIQWIR--LMYCYPEEITDELIDTIAEEEKVCHYLDIPIQHSEDPVL 266

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
           R +GR     + +  I   R   P ++    LI   P +T    E  ++       D L 
Sbjct: 267 RRMGRRTCKKDIVELIAKLRIRIPDIAIRTTLIAGFPGETEADHEALMEFVNESEFDRLG 326

Query: 204 LYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQS 241
           ++  + E+GT    F    ++       +++      ++  
Sbjct: 327 VFTYSPEEGTPAASFPNQIENEVAEKWRDDIMALQQEVSYD 367


>gi|260063207|ref|YP_003196287.1| hypothetical protein RB2501_00316 [Robiginitalea biformata
           HTCC2501]
 gi|88783301|gb|EAR14473.1| hypothetical protein RB2501_00316 [Robiginitalea biformata
           HTCC2501]
          Length = 476

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 65/198 (32%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C  KC YC   +      + + + +++ L   + +        + + +  G  G     +
Sbjct: 186 CDYKCTYC---TIPLARGISRSDTLENVLENAREISARGIREIVLTGVNIGDYGKGENGD 242

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
            ++    LD +     V     + I    P+ ++          +  V    + +QS   
Sbjct: 243 KRHKHTFLDLVRALDDVPGIERVRISSIEPNLLKNETIDFVAGSRHFVPHFHIPLQSGSN 302

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R +        +   R + P   +  D+I   P +T   +           V 
Sbjct: 303 SILKRMRRRYMRELYADRVARIREVMPHACIGVDVIVGFPGETEDHFMETYNFLHELEVS 362

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +L ++  +    T   KM
Sbjct: 363 YLHVFTYSERADTPAAKM 380


>gi|332662143|ref|YP_004444931.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332330957|gb|AEE48058.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 481

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 27/208 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLT--GPRSISSI-----FFGGGT 80
           C   C +C     V  +  G+E    +F + +   ++L   G R ++ +      +    
Sbjct: 194 CDNMCSFC-----VVPFTRGRERSRDAF-SILAEAQELYERGYREVTLLGQNVDSYKWTN 247

Query: 81  P---SLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRIS 134
           P   +L+   ++  ++        V+ ++ +     +P  +         K       I 
Sbjct: 248 PETETLVNFAHLLEMVAL------VAPDLRVRFSTSHPKDITNEVLHTIAKYPNICKYIH 301

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQ 192
           L VQS     L  + R ++    +  I   R I P   +S D+I     +T  + +  L 
Sbjct: 302 LPVQSGNSNVLERMNRTYDREWYMERIEAIRQIIPDCAISSDIIAGFCSETEAEHQDTLS 361

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHK 220
                      ++  +   GTL  + + 
Sbjct: 362 MIEFADYSMSYMFFYSERPGTLAARKYP 389


>gi|302671973|ref|YP_003831933.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
 gi|302396446|gb|ADL35351.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
          Length = 454

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 18/190 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C YC            +   +   LTE++  +++      ++ I  G      ++ 
Sbjct: 170 CNQFCSYC---VIPYARGRVRSREMSEILTEIEGLVQKGCKEVVLTGIHIGSYG---LDK 223

Query: 87  QNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
               +++D + K   +S    I +    P  +   N +             L +QS  + 
Sbjct: 224 GE-PMLVDLVEKIADISGIDRIRLGSIEPRLITAENTRRLAAIDKLCPHFHLSLQSGCDT 282

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R++ ASE   ++ L R  F R  ++ D+I   P +T  +            V+ 
Sbjct: 283 VLKRMNRHYTASEFEESVRLLREAFDRPAITTDVIVGFPGETEEE-----FEECRAFVEK 337

Query: 202 LSLYQLTIEK 211
           +  Y++ + K
Sbjct: 338 IDFYEMHVFK 347


>gi|227549086|ref|ZP_03979135.1| tRNA 2-methylthioadenosine synthase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227078868|gb|EEI16831.1| tRNA 2-methylthioadenosine synthase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 512

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LAR 165
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + +  +    A+
Sbjct: 256 TSPHPAEFTSDVIDAMAETPNVCPQLHMPLQSGSDKVLKDMRRSYRSKKFLGILDEVRAK 315

Query: 166 NIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
                ++ D+I   P +T   ++  L             +Q +   GT    M
Sbjct: 316 LPHASITTDIIVGFPGETEEDFQATLDVVEKARFTSAFTFQYSPRPGTPAATM 368


>gi|46241653|gb|AAS83038.1| Fe-S oxidoreductase-like protein [Azospirillum brasilense]
          Length = 598

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 78/223 (34%), Gaps = 23/223 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVG----------QENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  KC +C + + +                + ++++        +R+L       SI+F 
Sbjct: 242 CPYKCIFCVWPATMTGNDPDGTGKRSVRFYEPDYVEG------MLRELVERYGYRSIYFD 295

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
             T + +  +++  I + + +       +  +      ++++  ++  R +G   + LG 
Sbjct: 296 DDTFN-LGDRHVLGICEVMTRI-----GLPWSAMCRADTIKLETWRAMRDSGCFGVKLGF 349

Query: 138 QSLEEQSLRFL-GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           +S  +     +  +  N   A  A+H  + +   +     Y LP +T  Q +       S
Sbjct: 350 ESGNQWVNDNIVNKRLNLETARTAVHEIKRLGMTVHGTFTYGLPGETREQMQDTKSYIAS 409

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLT 239
             +D          +GT    + + G L   +     + Y   
Sbjct: 410 LPLDTFQETGCGEIEGTPMSTLREKGHLDRYAGAALDEQYLYV 452


>gi|194337570|ref|YP_002019364.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194310047|gb|ACF44747.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 546

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+         F+ E++    L     +         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSPKL---FVDEIEV---LVKQHKVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      +V   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRKLDVTWGINTRVTDIMRDADLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKLAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|332885636|gb|EGK05882.1| MiaB-like tRNA modifying enzyme [Dysgonomonas mossii DSM 22836]
          Length = 436

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 64/188 (34%), Gaps = 8/188 (4%)

Query: 32  C-PYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  +C F +        +   I+S + + + + +  G + I       G       +   
Sbjct: 159 CDYFCSFCTIPFARGRSRNGSIESMVQQAKEVAE-KGGKEIVLTGVNIGDFGRTTGETFF 217

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFL 148
            ++  + +   +      +IE  P+ +     Q   ++        + +QS  +  L+ +
Sbjct: 218 DLVKALDEVEGIERYRISSIE--PNLLTDEIIQFVAQSKRFAPHFHIPLQSGSDAVLKLM 275

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            R ++ +     +   +++ P   +  D+I     +T   ++       S     L ++ 
Sbjct: 276 RRRYDTALFRHKVEKIKSVMPDAFIGVDVIVGTRGETDEYFDEAKAFLESLDFSQLHVFT 335

Query: 207 LTIEKGTL 214
            +    T 
Sbjct: 336 YSERPNTQ 343


>gi|329116223|ref|ZP_08244940.1| radical SAM protein, TIGR01212 family [Streptococcus parauberis
           NCFD 2020]
 gi|326906628|gb|EGE53542.1| radical SAM protein, TIGR01212 family [Streptococcus parauberis
           NCFD 2020]
          Length = 319

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 11/204 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +                + F  E+ +M           ++F   T +      +A 
Sbjct: 45  CTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHAKWPEVKKYLVYFQNFTNT---HAPLAT 101

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V + I   P  +  +      +        + LG+Q+  E + + +
Sbjct: 102 IKERYEQAIFEPGVVGVNIGTRPDCLPDDVIAYLGELAETMHVTVELGLQTTYEVTSQLI 161

Query: 149 GRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLYQ 206
            R H+ +     +   R      +   LI  LP +T       ++R +    +  + L+ 
Sbjct: 162 NRAHSYALYKETVKRLRKYPKIEIVSHLINGLPGETHEMMIENVRRCVTDNEIQGIKLHL 221

Query: 207 LTIEKGTLFYKMHKDGDLVLPSEN 230
           L +   T   + +  G L L S+ 
Sbjct: 222 LHLMTNTRMQRDYHQGRLQLMSQE 245


>gi|198423331|ref|XP_002121617.1| PREDICTED: similar to CDK5 regulatory subunit associated protein
           1-like 1 [Ciona intestinalis]
          Length = 516

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 17/204 (8%)

Query: 28  CVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R           +Q  +             S  +  +G    + + 
Sbjct: 215 CLNSCTYCK-TKHARGNLGSYPVAEIVQRAIQSFGEGVVEIWLTSEDTGAYGRDIGTSL- 272

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  ++  I     +   +      NP  + +++ +   K        + + + VQS 
Sbjct: 273 PELLWELVKVIPVGCMLRVGM-----TNPPYI-LDHLEEMGKILNHPNVYSFLHVPVQSG 326

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +Q+L  + R + AS+    +   R   P +S   D+I   P +T   +E  +     Y 
Sbjct: 327 SDQTLHEMRREYTASDFELVVDTLRASVPGISIATDIICGFPTETDEDFEDTMTLCEKYK 386

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDG 222
              L + Q     GT   +M +  
Sbjct: 387 FPSLFINQFFPRPGTPAARMPQIH 410


>gi|1680650|gb|AAC44580.1| biotin synthase [Corynebacterium glutamicum]
          Length = 334

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 24/201 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +   N +++     +   +             G     
Sbjct: 70  CPEDCHFCSQSGLFESPVRSVWLDIPNLVEAA----KQTAKTGATEFCIVAAVKG----- 120

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE-- 141
              + +   L+       + S VEI + A+  ++          AGV+R +  +++    
Sbjct: 121 -PDERLMTQLEEA--VLAIHSEVEIEVAASIGTLNKEQVDRLAAAGVHRYNHNLETARSY 177

Query: 142 -EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             + +      H   E    + L       +    I  +  +T+ Q      +      D
Sbjct: 178 FPEVVT----THTWEERRETLRLVAEAGMEVCSGGILGM-GETLEQRAEFAVQLAELDPD 232

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
            + +  L    GT F      
Sbjct: 233 EVPMNFLDPRPGTPFADRELM 253


>gi|297620406|ref|YP_003708543.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
 gi|297375707|gb|ADI37537.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
          Length = 458

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           P  +     Q  ++       + + +Q + +  L+ + R  + ++ I  I   R   P +
Sbjct: 252 PDEITGELIQLMKEEPRICPYVDMPIQHVNDNMLKSMHRATHRAQIIGTIETMRKQIPDI 311

Query: 172 SF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           S    LI   P +T  Q+    Q      +D++ ++Q + E G+  Y + + 
Sbjct: 312 SIRTSLIVGFPGETEEQFLELAQFLEEQRLDNVGVFQFSREPGSHAYGLPEQ 363


>gi|255019771|ref|ZP_05291848.1| Radical SAM domain protein [Acidithiobacillus caldus ATCC 51756]
 gi|254970839|gb|EET28324.1| Radical SAM domain protein [Acidithiobacillus caldus ATCC 51756]
          Length = 376

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 80/255 (31%), Gaps = 31/255 (12%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ-----------SFLTEMQWMRQLTGPRSISSIFF 76
           C   C YC     + R++    ++                  ++ +           +  
Sbjct: 67  CRANCTYCG----LARHREESRDYADRNFIRVDWPTVRVDEMLERIAANGDKGQFERMCI 122

Query: 77  GGGTPSLIE-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL 135
                S+I  P +       + +    + ++ ++I +NP+++E  +    +  G +  ++
Sbjct: 123 -----SMITHPDSDHDTQVVLKRWMEAAPHIPVSILSNPTTMEKQDLIDLKNLGADIFTV 177

Query: 136 GVQSLEEQSL-----RFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWE 188
            + ++          + +   H+  +   AI  A  I+   +    LI  +  +T  +  
Sbjct: 178 ALDAVTPAIFERTRGKTVQSPHSWDKYWQAIEWAAEIYGPEKFGAHLICGM-GETEQEIL 236

Query: 189 MELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL 248
              QR       H  ++    EKG++                +   L +           
Sbjct: 237 EVCQRIKDMG-GHNHMFAFFPEKGSMMEDWDAVPQDHWRRVQLGRFLIDYAGGRYEDMSF 295

Query: 249 HAY-EISNHSFLGAE 262
            AY  + +  +  AE
Sbjct: 296 DAYGRVEDFGYPQAE 310


>gi|157374620|ref|YP_001473220.1| radical SAM family protein [Shewanella sediminis HAW-EB3]
 gi|157316994|gb|ABV36092.1| radical SAM [Shewanella sediminis HAW-EB3]
          Length = 644

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 16/176 (9%)

Query: 30  KKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           +KC +CD  S  ++ R+           +  ++ + + TG      +         + P+
Sbjct: 376 RKCSFCD-VSLDYIDRFDAASA---DILVDRIEQLIEETGETGFHFVDE------ALPPK 425

Query: 88  NIALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  +    I +N  +S    I  E    +      Q    +G   +S G++   ++ L+
Sbjct: 426 LLFAMAKRLIERNVVISWWGNIRFE---RTFSQARCQLLADSGCIAVSGGLEVASDRLLK 482

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
            + +  +            +    +   L+Y  P QT  +    L+       +  
Sbjct: 483 LMKKGVSVERVAQVTKAFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQMMKEGC 538


>gi|123478185|ref|XP_001322256.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
 gi|121905099|gb|EAY10033.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
          Length = 387

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-GGTPSLIEP 86
           C K+C YC  N++   + +  E  +                +   ++    G   S    
Sbjct: 76  CEKRCHYCGVNAY-EPFLIPHEAILGCC--------DFMWKKGYRNLVLQSGEITSRQRM 126

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +A +LD I   +    +  + I  +   ++  +++ +   GV R  L ++S   +   
Sbjct: 127 DWVASLLDKIFAKYGKDKDTGMCIILSIGELDYKDYKRFYDMGVQRYLLRIESSNPKLYA 186

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +    H+ +  +  +   + I        +  +P QT      +++         + L 
Sbjct: 187 TMHPADHSWTRRVECLQNLKKIGYVTGNGCLVGVPTQTFDDLAGDIEFFRDGQYPMIGLG 246

Query: 206 QLTIEKGTLFYKMH 219
              I   T   K  
Sbjct: 247 PYLIHNDTKMGKEI 260


>gi|160880587|ref|YP_001559555.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
           ISDg]
 gi|238065326|sp|A9KLS2|RIMO_CLOPH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|160429253|gb|ABX42816.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
           ISDg]
          Length = 440

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 26/204 (12%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFI-QSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C K C YC       D+ S      V +  F+ +  + E+  + Q T   ++  +   G 
Sbjct: 154 CDKHCTYCIIPKIRGDYRSVPMERLVEEAKFLSEGGVKELILIAQET---TVYGVDLYG- 209

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRK--AGVNRISLG 136
                  + +  +L    K   +     I I+   P  +        +      + + + 
Sbjct: 210 ------KKMLPELL---RKLCAIDGIEWIRIQYCYPEEINDELIDVLKSETKICHYLDIP 260

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q   +  L+ +GR  N  E +  I   R   P ++    LI   P +T    E+  +  
Sbjct: 261 IQHASDDILKRMGRRTNNEELVTLITKLRKEIPDIALRTSLITGFPGETEEDHEILKEFV 320

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKM 218
                + L ++  + E+ T   KM
Sbjct: 321 RKMRFERLGVFTYSKEEDTPAAKM 344


>gi|18310075|ref|NP_562009.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           str. 13]
 gi|110800579|ref|YP_695795.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           ATCC 13124]
 gi|168207484|ref|ZP_02633489.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens E
           str. JGS1987]
 gi|168214970|ref|ZP_02640595.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           CPE str. F4969]
 gi|168218108|ref|ZP_02643733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           NCTC 8239]
 gi|169342621|ref|ZP_02629366.2| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens C
           str. JGS1495]
 gi|182626330|ref|ZP_02954085.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens D
           str. JGS1721]
 gi|81767470|sp|Q8XLE9|MIAB_CLOPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123049876|sp|Q0TRE5|MIAB_CLOP1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|18144754|dbj|BAB80799.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110675226|gb|ABG84213.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           ATCC 13124]
 gi|169299263|gb|EDS81332.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens C
           str. JGS1495]
 gi|170661180|gb|EDT13863.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens E
           str. JGS1987]
 gi|170713591|gb|EDT25773.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           CPE str. F4969]
 gi|177908349|gb|EDT70894.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens D
           str. JGS1721]
 gi|182379874|gb|EDT77353.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
           NCTC 8239]
          Length = 447

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +S    ++ + +L           G    S    +
Sbjct: 165 CNNFCTYC-----IVPYVRGRERSRKS-EDIIKEIEELVSQGYKEITLLGQNVNSYGKGL 218

Query: 85  EPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E   + A +L  + +   +       + ++P  +  +     ++      ++ L VQS  
Sbjct: 219 EEDIDFAGLLRKVNEVKGLERVRF--MTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGS 276

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R+++    +  +   ++  P ++   D+I   P +T   +   L        
Sbjct: 277 SRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVGY 336

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D    +  +    T   KM
Sbjct: 337 DSAFTFIYSRRNHTPADKM 355


>gi|134295201|ref|YP_001118936.1| radical SAM domain-containing protein [Burkholderia vietnamiensis
           G4]
 gi|134138358|gb|ABO54101.1| Radical SAM domain protein [Burkholderia vietnamiensis G4]
          Length = 473

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 90/246 (36%), Gaps = 23/246 (9%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  ++          +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKS---------LKIMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETPETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
           A       + +       GT  YK   +   +  ++ + +      Q   +A G      
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQ--LAAIGYPHLSR 419

Query: 252 -EISNH 256
            EI +H
Sbjct: 420 DEIYHH 425


>gi|317010550|gb|ADU84297.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori SouthAfrica7]
          Length = 438

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 68/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLAHNGTKELMLLGQNVNNYGVRFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + N + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 GHAKVNFSDLLDKLSEIPGIERIRF--TSPHPLHMNDEFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++   +  
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVEKLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLETVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|196247898|ref|ZP_03146600.1| cobalamin B12-binding domain protein [Geobacillus sp. G11MC16]
 gi|196212682|gb|EDY07439.1| cobalamin B12-binding domain protein [Geobacillus sp. G11MC16]
          Length = 590

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 4/126 (3%)

Query: 108 ITIEANPSSVEVNNFQGY---RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLA 164
              E     +     +        G+ R  +GVQS  ++  R + R  N ++    + + 
Sbjct: 255 FQFEITADIMRPEVIEFLNNEAPPGLFRFEIGVQSTNDEVNRLIMRKQNFAKLSRTVTMI 314

Query: 165 RNIFPRM-SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           +         DLI  LP++    +        +   + L L  L + +GT       +  
Sbjct: 315 KEGGKITQHLDLIAGLPEEDYDSFRKTFNDVFALRPEELQLGFLKLLRGTGLRLRAHEYG 374

Query: 224 LVLPSE 229
            V    
Sbjct: 375 YVYMDH 380


>gi|197117156|ref|YP_002137583.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
           bemidjiensis Bem]
 gi|229890543|sp|B5EE49|MIAB_GEOBB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|197086516|gb|ACH37787.1| tRNA (2-methylthio-N6-dimethylallyl-A37) methylthiotransferase
           [Geobacter bemidjiensis Bem]
          Length = 441

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 18/233 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC          V      +S    ++ +R L           G    S    Q
Sbjct: 159 CDNFCAYC------IVPHVRGREISRSAAKVVEEVRALADSGVTEVTLLGQNVNSYCSKQ 212

Query: 88  ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
               +   +L  +A+   +      T  ++P  +     + +         I L  QS  
Sbjct: 213 PGEPDFPDLLRLVAQVDGIERIRFTT--SHPKDMSPRLIECFADLPKLAPHIHLPAQSGS 270

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L  + R + A + +A +   +   P + F  D+I   P +    ++  +        
Sbjct: 271 DRVLERMNRGYTAQQYLAKVAALKEACPAIQFTGDMIVGFPGEDEAAFQDTMALMEQVQY 330

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             L  +  +   GT   +     D     +   ++     Q  T+     + E
Sbjct: 331 ADLFSFIYSARPGTKAAE--YADDATRAEKQGRLERLQAAQKKTTLARNRSLE 381


>gi|325474131|gb|EGC77319.1| hypothetical protein HMPREF9353_01669 [Treponema denticola F0402]
          Length = 451

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 61/205 (29%), Gaps = 20/205 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLIEP 86
           C   C YC     +  Y  G+E  +   + E+         R +  I   G    S    
Sbjct: 162 CNNFCTYC-----IVPYVRGRE--VSRPVNEILQEITELSSRGVREITLLGQNVNSYKGE 214

Query: 87  Q------NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLG 136
                  +   +L  IA+    +  +     + ++P  +                 + L 
Sbjct: 215 DGEGRVIDFPKLLTLIAREADKTDMIRWIRFMSSHPKDMSDALIDTIAAEKRLCKLVHLP 274

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRA 194
           VQ   +  L+ + R +        I   +   P +  S D++   P +T    +  L   
Sbjct: 275 VQHGSDTILKRMNRVYTIEHYKNRIKRLKETIPDIALSTDILMGFPGETEDDVKAILDLM 334

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMH 219
                D   +Y     +GT  +   
Sbjct: 335 QEIEFDSAFMYHYNPREGTKAFNYP 359


>gi|221201391|ref|ZP_03574430.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans CGD2M]
 gi|221208871|ref|ZP_03581869.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans CGD2]
 gi|221214047|ref|ZP_03587020.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans CGD1]
 gi|221166224|gb|EED98697.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans CGD1]
 gi|221171327|gb|EEE03776.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans CGD2]
 gi|221178659|gb|EEE11067.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans CGD2M]
          Length = 473

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 89/246 (36%), Gaps = 23/246 (9%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETKETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
           A       + +       GT  YK   +   +  ++ + +      Q   +A G      
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQAIENGWMEENKTINLVSKEGVQ--LAAIGYPHLSR 419

Query: 252 -EISNH 256
            EI +H
Sbjct: 420 DEIYHH 425


>gi|218778760|ref|YP_002430078.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218760144|gb|ACL02610.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 289

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 91/235 (38%), Gaps = 12/235 (5%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C       R+K+  ++ I   + ++ +  Q    +    +  G     +I  
Sbjct: 25  CSHNKCTFCAAYK-GERFKIKSDDII---MEDIAFAAQYCRRQDRLFLCDGDAL--IIPQ 78

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSV-EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           + +   L  I +     + V         S+  ++  +  R+ G+    +G+++ ++Q+L
Sbjct: 79  KRLVKFLTEIKRQLPWVTRVGTYANHKSLSMKSLDELKELRELGLKIAYMGLETGDDQTL 138

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLS 203
           + + +  ++ + IA     R    ++S  ++  L    ++        +   +   +++ 
Sbjct: 139 KHVRKGCDSEKMIAMGKKCREAGIQLSITVLVGLAGRERSQEHAIATGKVLSAIDPEYVG 198

Query: 204 LYQLTIEKGTLFYKMHKDGDLVL--PSENVAVDLYNLTQSITSAHGLHAYEISNH 256
              L I  GT  Y  ++ GD  +  P E +      +  +  +    HA   SN+
Sbjct: 199 ALSLMIVPGTELYTEYEAGDFPILEPDEVLTELGTMIANTNLTNGLFHANHASNY 253


>gi|152991225|ref|YP_001356947.1| tRNA-i(6)A37 thiotransferase enzyme [Nitratiruptor sp. SB155-2]
 gi|229890577|sp|A6Q531|MIAB_NITSB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|151423086|dbj|BAF70590.1| tRNA-i(6)A37 thiotransferase enzyme [Nitratiruptor sp. SB155-2]
          Length = 433

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 78/257 (30%), Gaps = 31/257 (12%)

Query: 16  SNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI 74
           ++    +++    C KKC +C     V   +  + +     +  +Q +R+     +    
Sbjct: 137 TSPYKAFINISIGCDKKCTFC----IVPNTRGEEISIPPELI--LQEVRRAVDTGAKEIF 190

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEAN-----------PSSVEVNNFQ 123
             G          N        A+    +  + +  E +           P  ++    Q
Sbjct: 191 LLGQNV------NNYGRSFSDKARKVDFTDLLRMVSEIDGVRRIRFTSPHPLHMDDKFLQ 244

Query: 124 GYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAI-AAIHLARNIFP-RMSFDLIYAL 179
            +         + + +QS   + LR + R +     +  A+ L   +    +S D+I   
Sbjct: 245 EFATNPKICKSMHMPLQSGSTKVLRDMKRGYTKEWFLDRAMKLREMVPEVHISTDIIVGF 304

Query: 180 PKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLY 236
           P ++   +   +        + +  ++ +    T    +     D         +     
Sbjct: 305 PGESEEDFADTIDVVQKVRFEQIFSFKYSPRPLTPAKDYENQIPDEVASRRLSYLQDLHL 364

Query: 237 NLTQSITSAHGLHAYEI 253
            +  SI+       YE+
Sbjct: 365 QMLDSISEQEKDKVYEV 381


>gi|118594514|ref|ZP_01551861.1| tRNA-i(6)A37 modification enzyme MiaB [Methylophilales bacterium
           HTCC2181]
 gi|118440292|gb|EAV46919.1| tRNA-i(6)A37 modification enzyme MiaB [Methylophilales bacterium
           HTCC2181]
          Length = 441

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 66/203 (32%), Gaps = 34/203 (16%)

Query: 32  CP-YCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C  YC F              +   L E+           I     G    +L+  QN+ 
Sbjct: 157 CSKYCSFCVVPYTRGEEISRPLDDILDEI-----------IELTMIGVQEITLLG-QNVN 204

Query: 91  LILDGIAKN--WTVSSNVEITIEAN-----------PSSVEVNNFQGYRKAGVNRIS--- 134
                   N     ++ +E   E N           P+ +       + K  +N++S   
Sbjct: 205 AYRGQSQHNGVCDFATLLEYVAEINEVKRIRFTTSHPNEMTEELIACFGK--INKLSKQF 262

Query: 135 -LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMEL 191
            L +QS  ++ L  + RN+   E  + I   + + P +S   D I   P +T  ++    
Sbjct: 263 HLPIQSGSDRVLSAMKRNYTVLEYKSIIKKLKKVCPEISLTSDFIIGFPNETDEEFNQTK 322

Query: 192 QRALSYAVDHLSLYQLTIEKGTL 214
           +       D+   +  +   GT 
Sbjct: 323 KIMEEVNFDYSFSFLYSPRPGTP 345


>gi|113971587|ref|YP_735380.1| biotin synthase [Shewanella sp. MR-4]
 gi|113886271|gb|ABI40323.1| Radical SAM domain protein [Shewanella sp. MR-4]
          Length = 359

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 17/192 (8%)

Query: 28  CVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC  +S    V+RY++  E+ + +       +  L     +      G   S  
Sbjct: 71  CRNHCHYCGLHSENRQVKRYRLSNEDILSAV----DSIASLGLGTVVLQS---GDDFSY- 122

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + I+ ++  I +   ++      I  +    + +  + +R+AG +R  L +++ +   
Sbjct: 123 RCKRISALISEIKQRHNLA------ITLSLGDRKHHELENWREAGADRYLLKMETFDRAL 176

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
                   +  E IA +   +++  +    +I  LP  T      ++Q      +D L+ 
Sbjct: 177 FARCRPKAHFDERIARLAHLKSLGFQTGSGIIIDLPGMTDAILARDIQCLTELQLDMLAC 236

Query: 205 YQLTIEKGTLFY 216
                   T F 
Sbjct: 237 GPFIAHAQTPFA 248


>gi|256027240|ref|ZP_05441074.1| biotin synthase [Fusobacterium sp. D11]
 gi|289765217|ref|ZP_06524595.1| biotin synthetase [Fusobacterium sp. D11]
 gi|289716772|gb|EFD80784.1| biotin synthetase [Fusobacterium sp. D11]
          Length = 360

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 75/239 (31%), Gaps = 14/239 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC  + H +          +          +  G    S +  G G       +
Sbjct: 101 CSENCKYCAQSVHFKTGADVYGLISKELALYEAKKNENEGAHRFSLVTSGRGLNG--NEK 158

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---LEEQS 144
            +  +++        +  +E+   A+         Q    AGV      ++S        
Sbjct: 159 ELDKLVEIYKYIGIHTGKLELC--ASHGICTKEALQKLADAGVTTYHHNLESSRRFYPNV 216

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
                 +H   + +  I  A+ +   +    I+ L  +T+           +  +  + +
Sbjct: 217 ----CTSHTYDDRVNTIKNAKAVGLNVCSGGIFGL-GETIEDRIDMALDLRTLDIHSVPI 271

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
             LT   GT F   +++ +     + +++  + L ++    +     ++  H+  G   
Sbjct: 272 NVLTPIPGTPFEN-NEEVNPFEILKTISIYRFILPKAFLR-YCGGRIKLGEHAKTGLRC 328


>gi|300774217|ref|ZP_07084084.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300758896|gb|EFK55725.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 447

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 7/193 (3%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           C Y C F +        +   I+  + + + +   +G + I       G   + + +   
Sbjct: 159 CDYSCTFCTIPLARGASRSGKIEDIVRQAEEIAA-SGVKEIVLTGVNIGDFGVRDGERQD 217

Query: 91  LILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQSLRF 147
             LD +     V     I I    P+ +  +  +     K  V    + +QS   + L  
Sbjct: 218 RFLDLVKALDEVEGIDRIRISSIEPNLLANDIIEFVAQSKRFVPHFHMPLQSGNNKILGM 277

Query: 148 LGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +        +   +++ P   +  D+I   P +T   +           + +L ++
Sbjct: 278 MRRRYKRELYAERVAKIKSLMPDCCIGVDVIVGFPGETREDFLDTYNFLNEMDISYLHVF 337

Query: 206 QLTIEKGTLFYKM 218
             +  + T+  +M
Sbjct: 338 TYSERENTIAAQM 350


>gi|225848434|ref|YP_002728597.1| hypothetical protein SULAZ_0612 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643287|gb|ACN98337.1| conserved hypothetical protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 405

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 78/227 (34%), Gaps = 14/227 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFGGGTPSLIEP 86
           C   C +C   +   ++K      I+  + E +++        +I S         +   
Sbjct: 116 CDHTCSFCAIPNIRGKHKSKP---IEKLVEEAKYLADQGVKELNIVSQDTSYYGTDIYGK 172

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  +L  + K   +       +   P++V  + F+  + +   +  I + +Q  ++  
Sbjct: 173 PMLFELLRKLEKVEGIKWIRLYYL--YPTTVNEDFFKFIKDSQKVLPYIEMPIQHTQDHI 230

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   +    +       P M+    +I   P +    +   L+       D L
Sbjct: 231 LKDMMRGYRKKKLYQILEWKEKYTPDMTIRSSVIVGYPTEKEKDFLSMLEFLKEAKFDWL 290

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
            ++  + E+GT  Y+ HKD       +   +  +N    +       
Sbjct: 291 GVFTYSHEEGTPAYEKHKDK----IPKKEKLRRFNEVIKLQEDITYE 333


>gi|33866726|ref|NP_898285.1| Fe-S oxidoreductase [Synechococcus sp. WH 8102]
 gi|81573837|sp|Q7U477|RIMO_SYNPX RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|33639327|emb|CAE08709.1| possible Fe-S oxidoreductase [Synechococcus sp. WH 8102]
          Length = 464

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 67/214 (31%), Gaps = 13/214 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C  +C +C     + + +  Q +     +  +         + +  +       +   ++
Sbjct: 163 CDYRCAFC----IIPKLRGDQRS---RPIESIVAEAHQLVEQGVQELILISQITTNYGLD 215

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + + +     V         A P+ +       YR+    V  + L +Q    +
Sbjct: 216 LYGKPKLAELLRALGEVEIPWIRVHYAYPTGLTPEVLAAYREVPNVVPYLDLPLQHSHPE 275

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R   A      +   R+  P       LI   P +T   ++  ++       DH
Sbjct: 276 VLRAMNRPWQADVNDRLLDQIRDQLPDAVLRTTLIVGFPGETEEHFQHLMEFLRRQRFDH 335

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           + ++  + E GT   ++    D  +        +
Sbjct: 336 VGVFTFSPEDGTAAAELPNPVDPDVAQARKDALM 369


>gi|332665065|ref|YP_004447853.1| MiaB-like tRNA modifying enzyme [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333879|gb|AEE50980.1| MiaB-like tRNA modifying enzyme [Haliscomenobacter hydrossis DSM
           1100]
          Length = 446

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 76/236 (32%), Gaps = 19/236 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG--GGTPSLI 84
           C  KC +C   +  +     + + +++ +     + ++     + + +  G  G    +I
Sbjct: 155 CNYKCSFC---TIPQARGASRSDKVENVVANAWKIAEMGVKEIVLTGVNIGDFGNGTEVI 211

Query: 85  ---EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKA--GVNRISLGVQ 138
               P+  A+ +D I +   V +     I    P+            +      + + +Q
Sbjct: 212 EGTSPKKEAMFIDLIRELDQVEAISRFRISSIEPNLCTDEIIDFVAGSQRFAPHLHMPLQ 271

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALS 196
           S     LR + R +        +   +   P   +  D+I   P +T   +         
Sbjct: 272 SGNNTQLRQMRRRYTRELYTDRVARIKQQMPHACIGVDVIVGFPGETQEDFLETYHFLHD 331

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
             + +L ++  +    T    M       +   NV  +   +   ++     H YE
Sbjct: 332 LDISYLHVFTYSERANTPAADM-----DGVVPVNVRRERNEMLGILSEKKRRHFYE 382


>gi|325290538|ref|YP_004266719.1| RNA modification enzyme, MiaB family [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965939|gb|ADY56718.1| RNA modification enzyme, MiaB family [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 464

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 19/201 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG--------G 78
           C + C YC            +    +    E + + +      + + I  G        G
Sbjct: 175 CNQFCSYC---IVPLARGPSRSRPPEKIEEEARMLLRGGYKELVLTGIHIGVYGRDWNRG 231

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG---VNRISL 135
           G         +  +LD IA    ++     +IE  P  +     Q   K          +
Sbjct: 232 GETGKDTGDELGCLLDRIAGLPGLARLRLGSIE--PKEISSGLLQVIAKNQKVVCPHFHI 289

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQR 193
            +QS  +  L+ + R +  +E    +   R+ FP+  +S D++   P +T  +    ++ 
Sbjct: 290 PLQSGSDSVLKRMRRPYTTAEYWDLLDRIRSRFPQAAISADVMTGFPGETREEHTESMEF 349

Query: 194 ALSYAVDHLSLYQLTIEKGTL 214
                +  L ++  +   GT 
Sbjct: 350 IQKCRLADLHVFPYSRRPGTP 370


>gi|317179336|dbj|BAJ57124.1| putative ATP-binding protein [Helicobacter pylori F30]
          Length = 437

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|308376766|ref|ZP_07439953.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu008]
 gi|308349977|gb|EFP38828.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu008]
          Length = 358

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 57/202 (28%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 94  CPEDCHFCSQSGLFASPVRSAWLD----IPSLVEAAKQTAKSGATEFCIVAAVRG----- 144

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +       A    + + VEI I  +   +           GV+R +  +++    
Sbjct: 145 -PDERLMA--QVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSF 201

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 202 FANVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPD 256

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 257 EVPLNFLNPRPGTPFADLEVMP 278


>gi|308061622|gb|ADO03510.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori Cuz20]
          Length = 437

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|261839125|gb|ACX98890.1| hypothetical protein HPKB_0280 [Helicobacter pylori 52]
          Length = 437

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|291457707|ref|ZP_06597097.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bifidobacterium breve DSM
           20213]
 gi|291380760|gb|EFE88278.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bifidobacterium breve DSM
           20213]
          Length = 483

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 78/230 (33%), Gaps = 19/230 (8%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + + +    ++ +  +V     C   C +C       R K              Q +
Sbjct: 160 LQQFPSQLPAARASRVSSWVAISVGCNNTCTFC--IVPTTRGKEKDRRPGDILDEVRQCV 217

Query: 63  RQLTG-----PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV 117
                      ++++S  +G G     +    + +L        +          +P++ 
Sbjct: 218 ANGAKEVTLLGQNVNSFGYGIG-----DRYAFSKLLRACGTIDGLERVRF--TSPHPAAF 270

Query: 118 EVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSF 173
             +  +   +    ++++ + +QS  ++ LR + R++ AS+ +  +   R   P   +S 
Sbjct: 271 TDDVIEAMAETPNVMHQLHMPLQSGSDKILRAMRRSYRASKFMTILEKVRQAMPDAQIST 330

Query: 174 DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           D+I   P +T   ++  L             +  +   GT   +M +   
Sbjct: 331 DIIVGFPGETEEDFQQTLDVVRQARFSSAFTFIYSPRPGTPAAEMEQVPH 380


>gi|215404110|ref|ZP_03416291.1| biotin synthase [Mycobacterium tuberculosis 02_1987]
 gi|289745974|ref|ZP_06505352.1| biotin synthetase bioB [Mycobacterium tuberculosis 02_1987]
 gi|289686502|gb|EFD53990.1| biotin synthetase bioB [Mycobacterium tuberculosis 02_1987]
          Length = 349

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 57/202 (28%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 85  CPEDCHFCSQSGLFASPVRSAWLD----IPSLVEAAKQTAKSGATEFCIVAAVRG----- 135

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +       A    + + VEI I  +   +           GV+R +  +++    
Sbjct: 136 -PDERLMA--QVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSF 192

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 193 FANVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPD 247

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 248 EVPLNFLNPRPGTPFADLEVMP 269


>gi|167586671|ref|ZP_02379059.1| Radical SAM domain protein [Burkholderia ubonensis Bu]
          Length = 473

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 90/246 (36%), Gaps = 23/246 (9%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  ++          +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGMTWSCNAKANVPYKS---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
           A       + +       GT  YK   +   +  ++ + +      Q   +A G      
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQ--LAAIGYPHLSR 419

Query: 252 -EISNH 256
            EI +H
Sbjct: 420 DEIYHH 425


>gi|121535290|ref|ZP_01667104.1| MiaB-like tRNA modifying enzyme YliG [Thermosinus carboxydivorans
           Nor1]
 gi|121306175|gb|EAX47103.1| MiaB-like tRNA modifying enzyme YliG [Thermosinus carboxydivorans
           Nor1]
          Length = 441

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 53/162 (32%), Gaps = 9/162 (5%)

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +L  + +   +       +   P        +   K       + L +Q + +  L
Sbjct: 213 QLPQLLRALVQIEGIEWIR--LLYCYPRYFTDELIEVIAKEPKICKYVDLPLQHIHDDIL 270

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R  +  +  + +   R   P ++     I   P +T   +++  +       DH+ 
Sbjct: 271 KAMHRRDSRFDIESLLAKIRKAIPDVAIRTSFIVGFPGETDDHFQVLQEFMQVQKFDHVG 330

Query: 204 LYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSI 242
           ++  + E+GT+         +         +      +++ I
Sbjct: 331 IFTYSQEEGTVAGAMADQVPEEVKQERYHALMALQCQISEEI 372


>gi|94967905|ref|YP_589953.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549955|gb|ABF39879.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 461

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 37/128 (28%)

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           I +  A+    S  +                    + G  RI +G +S  ++ L  + R 
Sbjct: 259 IREYSAEMKRRSLRIPFECITRADRFNEEMAVLLSELGCFRIWIGSESGSQRILDAMERG 318

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
               +   A  L R    +    L++    + +   E  +        D          K
Sbjct: 319 VRVEQVHKATELCRTHGIQSGMFLMWGYEGEEVADIEATIDHVKQSKPDIFLTTLAYPIK 378

Query: 212 GTLFYKMH 219
           GT +Y   
Sbjct: 379 GTPYYNAV 386


>gi|15608727|ref|NP_216105.1| biotin synthase [Mycobacterium tuberculosis H37Rv]
 gi|15841041|ref|NP_336078.1| biotin synthase [Mycobacterium tuberculosis CDC1551]
 gi|31792775|ref|NP_855268.1| biotin synthase [Mycobacterium bovis AF2122/97]
 gi|121637496|ref|YP_977719.1| biotin synthase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148661384|ref|YP_001282907.1| biotin synthase [Mycobacterium tuberculosis H37Ra]
 gi|148822797|ref|YP_001287551.1| biotin synthase [Mycobacterium tuberculosis F11]
 gi|167970627|ref|ZP_02552904.1| biotin synthase [Mycobacterium tuberculosis H37Ra]
 gi|215411233|ref|ZP_03420041.1| biotin synthase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428065|ref|ZP_03425984.1| biotin synthase [Mycobacterium tuberculosis T92]
 gi|215430480|ref|ZP_03428399.1| biotin synthase [Mycobacterium tuberculosis EAS054]
 gi|215445772|ref|ZP_03432524.1| biotin synthase [Mycobacterium tuberculosis T85]
 gi|218753296|ref|ZP_03532092.1| biotin synthase [Mycobacterium tuberculosis GM 1503]
 gi|219557505|ref|ZP_03536581.1| biotin synthase [Mycobacterium tuberculosis T17]
 gi|224989971|ref|YP_002644658.1| biotin synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799372|ref|YP_003032373.1| biotin synthetase bioB [Mycobacterium tuberculosis KZN 1435]
 gi|254231793|ref|ZP_04925120.1| biotin synthetase bioB [Mycobacterium tuberculosis C]
 gi|254550592|ref|ZP_05141039.1| biotin synthase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260186537|ref|ZP_05764011.1| biotin synthase [Mycobacterium tuberculosis CPHL_A]
 gi|260200649|ref|ZP_05768140.1| biotin synthase [Mycobacterium tuberculosis T46]
 gi|260204858|ref|ZP_05772349.1| biotin synthase [Mycobacterium tuberculosis K85]
 gi|289443041|ref|ZP_06432785.1| biotin synthase [Mycobacterium tuberculosis T46]
 gi|289447197|ref|ZP_06436941.1| biotin synthetase bioB [Mycobacterium tuberculosis CPHL_A]
 gi|289554636|ref|ZP_06443846.1| biotin synthetase bioB [Mycobacterium tuberculosis KZN 605]
 gi|289569629|ref|ZP_06449856.1| biotin synthetase bioB [Mycobacterium tuberculosis T17]
 gi|289574257|ref|ZP_06454484.1| biotin synthetase bioB [Mycobacterium tuberculosis K85]
 gi|289751288|ref|ZP_06510666.1| biotin synthetase bioB [Mycobacterium tuberculosis T92]
 gi|289753675|ref|ZP_06513053.1| biotin synthetase bioB [Mycobacterium tuberculosis EAS054]
 gi|289757691|ref|ZP_06517069.1| biotin synthetase bioB [Mycobacterium tuberculosis T85]
 gi|289761737|ref|ZP_06521115.1| biotin synthetase bioB [Mycobacterium tuberculosis GM 1503]
 gi|294996539|ref|ZP_06802230.1| biotin synthase [Mycobacterium tuberculosis 210]
 gi|297634142|ref|ZP_06951922.1| biotin synthase [Mycobacterium tuberculosis KZN 4207]
 gi|297731129|ref|ZP_06960247.1| biotin synthase [Mycobacterium tuberculosis KZN R506]
 gi|298525084|ref|ZP_07012493.1| biotin synthetase bioB [Mycobacterium tuberculosis 94_M4241A]
 gi|306788687|ref|ZP_07427009.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu004]
 gi|306807866|ref|ZP_07444534.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu007]
 gi|306967683|ref|ZP_07480344.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu009]
 gi|313658461|ref|ZP_07815341.1| biotin synthase [Mycobacterium tuberculosis KZN V2475]
 gi|61219959|sp|P0A506|BIOB_MYCTU RecName: Full=Biotin synthase
 gi|61219960|sp|P0A507|BIOB_MYCBO RecName: Full=Biotin synthase
 gi|254810734|sp|A1KJ05|BIOB_MYCBP RecName: Full=Biotin synthase
 gi|254810741|sp|A5U2U5|BIOB_MYCTA RecName: Full=Biotin synthase
 gi|257096240|sp|A5WMR0|BIOB_MYCTF RecName: Full=Biotin synthase
 gi|2117248|emb|CAB09080.1| PROBABLE BIOTIN SYNTHETASE BIOB [Mycobacterium tuberculosis H37Rv]
 gi|2791851|gb|AAB96962.1| biotin synthetase [Mycobacterium bovis BCG]
 gi|13881253|gb|AAK45892.1| biotin synthase [Mycobacterium tuberculosis CDC1551]
 gi|31618365|emb|CAD96283.1| biotin synthetase bioB [Mycobacterium bovis AF2122/97]
 gi|121493143|emb|CAL71614.1| biotin synthetase bioB [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|124600852|gb|EAY59862.1| biotin synthetase bioB [Mycobacterium tuberculosis C]
 gi|148505536|gb|ABQ73345.1| biotin synthase [Mycobacterium tuberculosis H37Ra]
 gi|148721324|gb|ABR05949.1| biotin synthetase bioB [Mycobacterium tuberculosis F11]
 gi|224773084|dbj|BAH25890.1| biotin synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320875|gb|ACT25478.1| biotin synthetase bioB [Mycobacterium tuberculosis KZN 1435]
 gi|289415960|gb|EFD13200.1| biotin synthase [Mycobacterium tuberculosis T46]
 gi|289420155|gb|EFD17356.1| biotin synthetase bioB [Mycobacterium tuberculosis CPHL_A]
 gi|289439268|gb|EFD21761.1| biotin synthetase bioB [Mycobacterium tuberculosis KZN 605]
 gi|289538688|gb|EFD43266.1| biotin synthetase bioB [Mycobacterium tuberculosis K85]
 gi|289543383|gb|EFD47031.1| biotin synthetase bioB [Mycobacterium tuberculosis T17]
 gi|289691875|gb|EFD59304.1| biotin synthetase bioB [Mycobacterium tuberculosis T92]
 gi|289694262|gb|EFD61691.1| biotin synthetase bioB [Mycobacterium tuberculosis EAS054]
 gi|289709243|gb|EFD73259.1| biotin synthetase bioB [Mycobacterium tuberculosis GM 1503]
 gi|289713255|gb|EFD77267.1| biotin synthetase bioB [Mycobacterium tuberculosis T85]
 gi|298494878|gb|EFI30172.1| biotin synthetase bioB [Mycobacterium tuberculosis 94_M4241A]
 gi|308334702|gb|EFP23553.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu004]
 gi|308345676|gb|EFP34527.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu007]
 gi|308354613|gb|EFP43464.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu009]
 gi|326903202|gb|EGE50135.1| biotin synthetase bioB [Mycobacterium tuberculosis W-148]
 gi|328459122|gb|AEB04545.1| biotin synthetase bioB [Mycobacterium tuberculosis KZN 4207]
          Length = 349

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 57/202 (28%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 85  CPEDCHFCSQSGLFASPVRSAWLD----IPSLVEAAKQTAKSGATEFCIVAAVRG----- 135

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +       A    + + VEI I  +   +           GV+R +  +++    
Sbjct: 136 -PDERLMA--QVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSF 192

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 193 FANVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPD 247

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 248 EVPLNFLNPRPGTPFADLEVMP 269


>gi|254364440|ref|ZP_04980486.1| biotin synthetase bioB [Mycobacterium tuberculosis str. Haarlem]
 gi|308231878|ref|ZP_07414112.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu001]
 gi|308369477|ref|ZP_07417923.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu002]
 gi|308370764|ref|ZP_07422641.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu003]
 gi|308373190|ref|ZP_07431326.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu005]
 gi|308374348|ref|ZP_07435707.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu006]
 gi|308378981|ref|ZP_07484543.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu010]
 gi|308380120|ref|ZP_07488768.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu011]
 gi|308400898|ref|ZP_07493282.2| biotin synthetase bioB [Mycobacterium tuberculosis SUMu012]
 gi|134149954|gb|EBA41999.1| biotin synthetase bioB [Mycobacterium tuberculosis str. Haarlem]
 gi|308215690|gb|EFO75089.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu001]
 gi|308327441|gb|EFP16292.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu002]
 gi|308330867|gb|EFP19718.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu003]
 gi|308338479|gb|EFP27330.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu005]
 gi|308342212|gb|EFP31063.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu006]
 gi|308358569|gb|EFP47420.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu010]
 gi|308362495|gb|EFP51346.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu011]
 gi|308366179|gb|EFP55030.1| biotin synthetase bioB [Mycobacterium tuberculosis SUMu012]
 gi|323719848|gb|EGB28961.1| biotin synthetase bioB [Mycobacterium tuberculosis CDC1551A]
          Length = 365

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 57/202 (28%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 101 CPEDCHFCSQSGLFASPVRSAWLD----IPSLVEAAKQTAKSGATEFCIVAAVRG----- 151

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +       A    + + VEI I  +   +           GV+R +  +++    
Sbjct: 152 -PDERLMA--QVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETARSF 208

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 209 FANVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETLQQRAEFAAELAELGPD 263

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 264 EVPLNFLNPRPGTPFADLEVMP 285


>gi|260425046|ref|ZP_05734065.2| radical SAM domain protein [Dialister invisus DSM 15470]
 gi|260404010|gb|EEW97557.1| radical SAM domain protein [Dialister invisus DSM 15470]
          Length = 263

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 70/222 (31%), Gaps = 12/222 (5%)

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWT-VSSNVEITIE 111
           +  + +++  R       +  +F   G   ++    +  IL  + + +  +         
Sbjct: 13  EQIMRQIELARATDA-EGVRRVFLADGDALVLPTDRLLKILAVLKEYFPNLERVASYAAP 71

Query: 112 ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
            +     V      RKAG+  +  G++S + Q+L+ + +  +  ++I     A     ++
Sbjct: 72  GDILRKSVEELTALRKAGLTLLYYGMESGDSQTLKEIRKGVSGEQSIEVGKRAIAAGMQL 131

Query: 172 SFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
           S  +I  +     +                  LS   L + +G+      + G+      
Sbjct: 132 SIMVILGIAGVEGSERHALATAHAINEIKPTMLSALSLMLYRGSELKDQFERGEFHPLPP 191

Query: 230 NVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYWR 271
              +    L              + +   +   S H  NY R
Sbjct: 192 AGLMKELKLIME--------NVHLPDSERMIFRSNHVSNYIR 225


>gi|254245866|ref|ZP_04939187.1| Radical SAM family protein [Burkholderia cenocepacia PC184]
 gi|124870642|gb|EAY62358.1| Radical SAM family protein [Burkholderia cenocepacia PC184]
          Length = 480

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 89/244 (36%), Gaps = 19/244 (7%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 199 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 257

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  ++          +  ++ G+  +
Sbjct: 258 FDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKS---------LKIMKENGLRLL 308

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 309 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 368

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ-SITSAHGLHAYE 252
           A       + +       GT  YK   +   +  ++ + +      Q +      L   E
Sbjct: 369 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRDE 428

Query: 253 ISNH 256
           I +H
Sbjct: 429 IYHH 432


>gi|23099419|ref|NP_692885.1| hypothetical protein OB1964 [Oceanobacillus iheyensis HTE831]
 gi|22777648|dbj|BAC13920.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 450

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 76/230 (33%), Gaps = 11/230 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    ++ + +   + +      + +     G    ++  
Sbjct: 153 CNNFCTFC---IIPWSRGLLRSRDPKNVIEQATKLVKAGYKELVLTGIHTAGYGEDMKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N A++L  + +   +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NFAMLLRELEEVEGLERIRISSIEAS--QITDEVIDVIDQSNKIVRHLHVPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R ++ S     ++  +   P ++   D+I   P +T  +++             L 
Sbjct: 268 ARMRRKYSTSFYKEKVNKLQKALPGLAITSDVIVGFPGETEEEFQQTYSFIKEIGYAELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    +   P +   V          +      YE 
Sbjct: 328 VFPFSRRTGTPAARMENQVED--PIKEKRVHDLIALSDQLAKEYASRYEN 375


>gi|108562696|ref|YP_627012.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori HPAG1]
 gi|122386728|sp|Q1CUN4|MIAB_HELPH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|107836469|gb|ABF84338.1| conserved hypothetical ATP-binding protein [Helicobacter pylori
           HPAG1]
          Length = 437

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 20/228 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS 244
              D L  +  +    T      +   L +    +        + I  
Sbjct: 320 VRFDTLYSFIYSPRPFTEAGAWKERVPLEVSYSRLERLQNRH-KEILE 366


>gi|237709946|ref|ZP_04540427.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725388|ref|ZP_04555869.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265753598|ref|ZP_06088953.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 3_1_33FAA]
 gi|229436075|gb|EEO46152.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229456039|gb|EEO61760.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235312|gb|EEZ20836.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 3_1_33FAA]
          Length = 432

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C +KC YC       R+     E  I         + +      I    + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRHISRPMEEIIDEVKL---LVSEGVKEFQIIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ IA    V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KSQKLPELIERIANVPGVEWIRLHY--AYPAHFPEELFRVMREHDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R+ + +E    I           +   L+   P +    +E   +       D
Sbjct: 259 NMLNKMRRHVSKAETYELIEKFRREVPGIHLRTTLMVGHPGEAEEDFEELKEFVKKVRFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +  + E+GT   K ++D       +    +L  L Q I
Sbjct: 319 RMGAFAYSEEEGTFAAKEYEDSISHEVKQQRLDELMALQQEI 360


>gi|161525303|ref|YP_001580315.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans ATCC 17616]
 gi|189349959|ref|YP_001945587.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
           [Burkholderia multivorans ATCC 17616]
 gi|160342732|gb|ABX15818.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia multivorans ATCC 17616]
 gi|189333981|dbj|BAG43051.1| magnesium-protoporphyrin IX monomethyl ester oxidative cyclase
           [Burkholderia multivorans ATCC 17616]
          Length = 473

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 89/246 (36%), Gaps = 23/246 (9%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  +           +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKT---------LKVMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  +Q 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETKETIKKTIQY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-- 251
           A       + +       GT  YK   +   +  ++ + +      Q   +A G      
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQAIENGWMEENKTINLVSKEGVQ--LAAIGYPHLSR 419

Query: 252 -EISNH 256
            EI +H
Sbjct: 420 DEIYHH 425


>gi|317055261|ref|YP_004103728.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
 gi|315447530|gb|ADU21094.1| Radical SAM domain protein [Ruminococcus albus 7]
          Length = 345

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC     N++V+RY++  +  +       +      G R+   +   G   S  
Sbjct: 63  CKNDCYYCGIRRSNTNVQRYRLTPDEILDCCDEGYEL-----GFRTF--VLQSGEDKSYT 115

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
                  + D + +      +  +T+      +    ++  R+AG +R  L  ++ ++  
Sbjct: 116 ND----TLCDIVRRIKAAHPDCAVTLSL--GELTYEEYKALREAGADRYLLRHETADKAH 169

Query: 145 LRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
              L     +  + +  +   + +  +    ++   P QTM     ++    S+  + + 
Sbjct: 170 YEKLHPAEMSWDDRMECLKYLKELGYQTGAGIMVGSPYQTMECIAEDMLFFESFKPEMIG 229

Query: 204 LYQLTIEKGTLFYKMH 219
           +      K T F    
Sbjct: 230 IGPFLPHKDTPFRDEP 245


>gi|223936648|ref|ZP_03628559.1| Radical SAM domain protein [bacterium Ellin514]
 gi|223894812|gb|EEF61262.1| Radical SAM domain protein [bacterium Ellin514]
          Length = 341

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 19/193 (9%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-GGTPS 82
           FC + C YC     N ++ R++   +   +  +           P SI+ I    G  P 
Sbjct: 45  FCRENCAYCGMRRDNRNLARFRADHDKLAELIIHH--------RPASITDINIQSGEDPV 96

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
           ++    +  +++ + +   +       I     +++ + +   + AG     +  +  + 
Sbjct: 97  VVREVVLP-LINTLRRETPL------GISVCLGTLDDSLYTELKNAGAGIYIIKYEIADP 149

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
                +       E I  I        ++S   I  LP QT  +       A +  +D  
Sbjct: 150 ALYSKMTAPGTYKERIEHIRRLSASGWKVSSGFISGLPGQTKEELLSNFALARTLPLDGC 209

Query: 203 SLYQLTIEKGTLF 215
           S+        T  
Sbjct: 210 SVSPFIPGDETPL 222


>gi|124514462|gb|EAY55975.1| RNA modification enzyme, MiaB family [Leptospirillum rubarum]
          Length = 483

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 12/197 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI--FFGGGTPSLIE 85
           C   C +C          +      +S L E++ M    G R ++ I          L +
Sbjct: 187 CDHTCSFCA---IPLSRGLQVSRTRESLLEEVRMMAD-EGVREVTLIAQDLTRYGSDLED 242

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            + +  +L+ I +   +       + A P+ V     +  R +   +  + +  Q +   
Sbjct: 243 GEGLPRLLEEIDRIGRIPWVR--LLYAYPTQVTDRLLKVIRDSSTILKYLDIPFQHVSGT 300

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R  N    +  I   R I P ++     I   P +T  ++    +      +DH
Sbjct: 301 VLKRMNRPGNRESTMRLIDRIRRILPDITLRTTFIVGFPGETEEEFLEIEEFLKWSRLDH 360

Query: 202 LSLYQLTIEKGTLFYKM 218
           + ++  + E+GT  + M
Sbjct: 361 VGVFPFSREEGTPSFDM 377


>gi|77918729|ref|YP_356544.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77544812|gb|ABA88374.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 555

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 75/248 (30%), Gaps = 34/248 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   S     K  +   + + +  +  +    G   +          ++ + Q
Sbjct: 242 CPFKCVFCAEPSF--HGKSVRYADVDAIIGHIDMLASRYGMNVL----------TIYDDQ 289

Query: 88  NI---ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +       +   +       +EI        ++       + AGV+ I L ++S  E  
Sbjct: 290 LLLDKRRAKELFRRLAPYKLRIEIPNGVTAILIDEELAGLMKNAGVDSIYLAIESGSESV 349

Query: 145 LR-FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD--- 200
           L+  + +     +    +    +    +    I   P +T    +  L       +D   
Sbjct: 350 LKNIIKKPIRLDKIQPIVKSLHDAEIFVQAFFINGFPGETEQDRQKTLTFIKQVGIDWSL 409

Query: 201 --------HLSLYQLTIEKGTLFYKMHKDGDLVL-------PSENVAVDLYNLTQSITSA 245
                      LY++  E G +  +  K GDL +       P  +         +     
Sbjct: 410 FNFASPLRGSELYRICKENGWIEQRFQKIGDLDMTEYVIRAPGIDPLHIEMQTYRMNLEV 469

Query: 246 HGLHAYEI 253
           + ++ Y +
Sbjct: 470 NFVNNYRM 477


>gi|119358086|ref|YP_912730.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium phaeobacteroides DSM 266]
 gi|119355435|gb|ABL66306.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium phaeobacteroides DSM 266]
          Length = 546

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       + F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KHFVDEIEI---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +       V   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVTLCQELIDRKLGVTWGINTRVTDIMRDEDLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI + +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKFAIKMLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|320120285|gb|EFE27884.2| radical SAM domain protein [Filifactor alocis ATCC 35896]
          Length = 331

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 17/193 (8%)

Query: 27  FCVKKCPYCDFN---SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C +KC YC  N   S  +RY++ +E  IQ+ +      R+     ++            
Sbjct: 58  YCRRKCKYCGLNATNSSAKRYRMTEEEVIQTAI----HARKAGYLTAVLQSGEDA----Y 109

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I K   +       I  +            +  G +R  L  ++ +  
Sbjct: 110 FTVEKLGFIVKEIKKQVDMF------ITLSCGEKSFEELAYLKDCGADRYLLKHETADTS 163

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               L      +     +   + +        +  LP QT+     +L        D   
Sbjct: 164 LYGNLHPCGTLAARTQCLRDIKKLGYDAGSGFMIGLPTQTLHTIAEDLFLLYDLQCDMAG 223

Query: 204 LYQLTIEKGTLFY 216
           +        T   
Sbjct: 224 IGPFIPHPETELR 236


>gi|258648341|ref|ZP_05735810.1| RNA modification enzyme, MiaB family [Prevotella tannerae ATCC
           51259]
 gi|260851506|gb|EEX71375.1| RNA modification enzyme, MiaB family [Prevotella tannerae ATCC
           51259]
          Length = 431

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 8/196 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       ++       I + +  +              + + G    L   Q
Sbjct: 143 CDRKCAYCAIPLITGKHISRPIEDILAEVRTLVNQGVKEFQIIEQELTYYGVD--LYHKQ 200

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            IA +++ IA+   V         A P+    +  +   K     N + + +Q + +  L
Sbjct: 201 CIAELVEKIAETPGVEWVRLHY--AYPNQFPDSLLEVISKHDNICNYLDIALQHISDNVL 258

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R+    E I  I   R   P +     L+   P +T   +E  LQ       + L 
Sbjct: 259 QRMHRHVTKQETIDLIRKMREKVPDICIRTTLLLGFPGETDEDFEELLQFVKETRFNRLG 318

Query: 204 LYQLTIEKGTLFYKMH 219
            +  + E+GT     +
Sbjct: 319 AFVYSEEEGTYAANHY 334


>gi|212693204|ref|ZP_03301332.1| hypothetical protein BACDOR_02714 [Bacteroides dorei DSM 17855]
 gi|212664309|gb|EEB24881.1| hypothetical protein BACDOR_02714 [Bacteroides dorei DSM 17855]
          Length = 432

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 73/222 (32%), Gaps = 14/222 (6%)

Query: 28  CVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLI 84
           C +KC YC       R+     E  I         + +      I    + + G    L 
Sbjct: 146 CDRKCSYCAIPIITGRHISRPMEEIIDEVKL---LVSEGVKEFQIIAQELTYYGVD--LY 200

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + Q +  +++ IA    V         A P+      F+  R+       + + +Q + +
Sbjct: 201 KSQKLPELIERIANVPGVEWIRLHY--AYPAHFPEELFRVMREHDNVCKYMDIALQHISD 258

Query: 143 QSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R+ + +E    I           +   L+   P +    +E   +       D
Sbjct: 259 NMLNKMRRHVSKAETYELIEKFRREVPGIHLRTTLMVGHPGEAEEDFEELKEFVKKVRFD 318

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  +  + E+GT   K ++D       +    +L  L Q I
Sbjct: 319 RMGAFAYSEEEGTFAAKEYEDSISHEVKQQRLDELMALQQEI 360


>gi|58584362|ref|YP_197935.1| 2-methylthioadenine synthetase [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418678|gb|AAW70693.1| 2-methylthioadenine synthetase [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 411

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 64/204 (31%), Gaps = 15/204 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S        +   I + + +++    +        + F G   +     
Sbjct: 137 CDHSCTFC---SITEARGNNRSVPINNIIEQIK----IFVANGYQEVVFTGVDITDFGTD 189

Query: 88  NIALILDGIAKNWTVSSNVEIT----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                  G+     +    E+        + + V+             +  + L +QS  
Sbjct: 190 LFGKPSLGLMVRRVLKDVPELKRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGN 249

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRM--SFDLIYALPKQTMTQWEMELQRALSYAV 199
              L+ + R H+  + I   H  +++   +    D+I   P +T   ++  +        
Sbjct: 250 NLILKRMKRRHSREQVIEFCHKVKSLRSNIAYGADIIAGFPTETDEMFQDTVNLLEETNT 309

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGD 223
            +L  +  +  K T   +M +  +
Sbjct: 310 VYLHAFPYSKRKNTPAARMPQVPE 333


>gi|300854512|ref|YP_003779496.1| putative MiaB-like tRNA modifying enzyme [Clostridium ljungdahlii
           DSM 13528]
 gi|300434627|gb|ADK14394.1| putative MiaB-like tRNA modifying enzyme [Clostridium ljungdahlii
           DSM 13528]
          Length = 440

 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C   C YC     + + +     +    +  +         + +  I       +     
Sbjct: 157 CDNHCTYC----IIPKIRGK---YRSRTIENIINECNDLANQGVKEIILIAQDTTRYGID 209

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQG--YRKAGVNRISLGVQSL 140
           +   + +  ++  I+K   +       +   P  +                 I + +Q +
Sbjct: 210 IYGKKMLPELIQKISKINEIEWIR--LLYCYPEELTDEIINEISMNDKVCKYIDIPIQHI 267

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  L+ +GR     + I  I    AR     +   +I   P +T   +E       +  
Sbjct: 268 SDSILKLMGRRGRKLDIIENIDKLRARAKGIAIRTTIIVGFPGETEENFEELKDFVSTMK 327

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
            D+L +++ + E+GT   +M
Sbjct: 328 FDNLGVFKYSREEGTAAAEM 347


>gi|322516161|ref|ZP_08069094.1| TIGR01212 family radical SAM protein [Streptococcus vestibularis
           ATCC 49124]
 gi|322125337|gb|EFX96692.1| TIGR01212 family radical SAM protein [Streptococcus vestibularis
           ATCC 49124]
          Length = 333

 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 12/206 (5%)

Query: 35  CDFNSHVRRYKV---GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C F +           +    + F  E+ +M +         ++F   T +      + +
Sbjct: 62  CTFCTVSGSGDAIVAPEAPIREQFYHEIDFMHRKWPEVQKYLVYFQNFTNT---HAPLEV 118

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR---ISLGVQSLEEQSLRFL 148
           I +   +       V I I   P  +  +      +        + LG+Q+  E++  F+
Sbjct: 119 IKERYEQAINEPGVVGINIGTRPDCLPDDVVDYLAELTERMHVTVELGLQTTYEETSEFI 178

Query: 149 GRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRAL-SYAVDHLSLY 205
            R H+    +  +   R   P+  +   LI  LP ++       ++R +    +  + L+
Sbjct: 179 NRAHSYDLYVETVKRVRERAPKAEIVSHLINGLPGESHEMMVENVRRCVTDNDIQGIKLH 238

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENV 231
            L +   T   + + +G L L S+  
Sbjct: 239 LLHLMTNTRMQRDYHEGRLKLLSQEE 264


>gi|302037649|ref|YP_003797971.1| hypothetical protein NIDE2333 [Candidatus Nitrospira defluvii]
 gi|300605713|emb|CBK42046.1| conserved protein of unknown function, Fe-S oxidoreductase
           [Candidatus Nitrospira defluvii]
          Length = 541

 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 18/196 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  KC +C   S   +    +    +S + EM+ + +  G R    +             
Sbjct: 207 CPWKCIFCA--SEALKTTEMRVRSPRSVVNEMKQVVETFGTRHFYIV-----------DD 253

Query: 88  NIALILDGIAKNWTVSSNVEITI----EANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            + L  D I +   +     + I        + VE +      K+G+ R+S G+++++ +
Sbjct: 254 VMTLWKDHILEICDLIDREGLQITFEGSTRANLVEEDVIARLVKSGLIRLSFGLETVDPE 313

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + + +       + A  +           ++  LP +T       L+          +
Sbjct: 314 IRKTMKKQVPLEHYVKANGICNKYGVEALNSVMIGLPGETRETVRATLKFLRQAREVKQA 373

Query: 204 LYQLTI-EKGTLFYKM 218
            + + +   GT F+K+
Sbjct: 374 NFAIAVPYPGTEFHKL 389


>gi|328880563|emb|CCA53802.1| radical SAM domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 525

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 77/224 (34%), Gaps = 12/224 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C F +   +++      I+    +        G   IS++     T ++  P 
Sbjct: 232 CPFDCKFCSFPAASPKWRYKSAEKIR---DDWISYADRNGADVISAMD---STFTI-PPT 284

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +L+ +  +       E    AN  +       G + A   ++ +G +S+ + +L+ 
Sbjct: 285 RLRRLLEILPDSGV--PRWEGFSRANTIN-SAELVAGLKAAHCFQLHIGFESMNDDTLKR 341

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +  +  +   A+ L            I   P +    ++      L     H +L + 
Sbjct: 342 MSKRVSVKQNRRAVELLSESELSYYGLFIVGYPGEDPGMFQDTQDYLLREYSGHFALSRF 401

Query: 208 TIEKGTL--FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
           +I   T+  +    +   +     + A    ++  +   A  L+
Sbjct: 402 SITDETMPLWQDREELQIVADDPTDPASPWSHIGMNSAQAAQLY 445


>gi|325107658|ref|YP_004268726.1| biotin synthase [Planctomyces brasiliensis DSM 5305]
 gi|324967926|gb|ADY58704.1| biotin synthase [Planctomyces brasiliensis DSM 5305]
          Length = 343

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 64/194 (32%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI----QSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C YC  +          E ++    +  L   +   +         I   G  P+ 
Sbjct: 72  CPEDCGYCSQSKV---SDAPIEKYVWLNEEKLLAGARQAAE--NKAKTYCIVASGRGPTN 126

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
            E  ++A ++  I +   +     + +      ++    +   +AGV+RI+  + +   +
Sbjct: 127 REVDHVAGVVKKIKEELGMHICCCLGL------LKPEQAKTLAEAGVDRINHNLNT-SRE 179

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               +   H   + +  + +A      +   +I  +  +T               V  + 
Sbjct: 180 YYDTICSTHTYQDRLDTLKVASETGMELCSGIIVGM-GETDDDLVNVALELRDLNVKSIP 238

Query: 204 LYQLTIEKGTLFYK 217
           +  LT  +GT   K
Sbjct: 239 VNFLTNIEGTPLEK 252


>gi|31789483|gb|AAP58596.1| conserved hypothetical protein [uncultured Acidobacteria bacterium]
          Length = 410

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR-SISSIFFGGGTPSLIEP 86
           C + C YC      R     +   ++     +           +I+ +  G       + 
Sbjct: 147 CDETCSYC---IIPRTRGSSRSRPLELVTAGIARAIDAGYKEIAITGVHLGSYG---RDL 200

Query: 87  QNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            +   ++  + +      +V   + +  P             +        L +Q   ++
Sbjct: 201 GDGTTLVALVRRLADWPGDVLFRLSSLEPMDCSDALVDLVACSPRVAPHFHLPLQHGADR 260

Query: 144 SLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R + A      +    AR     +  DLI   P +    +E       S  +  
Sbjct: 261 VLRAMRRPYTAGFYRRLVERIRARLPHAAVGSDLIVGFPGEATEDFEESRALVASLPLTQ 320

Query: 202 LSLYQLTIEKGT 213
           L ++  +   GT
Sbjct: 321 LHVFPYSDRPGT 332


>gi|55379963|ref|YP_137813.1| hypothetical protein rrnAC3428 [Haloarcula marismortui ATCC 43049]
 gi|55232688|gb|AAV48107.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 427

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 37/212 (17%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQ-------------ENFIQSFLTEMQWMRQLTGPRSISSI 74
           C+  C YC     + +   G+                + +   E++   Q TG     + 
Sbjct: 134 CMSDCSYC-----ITKQATGRIESPSVEENVEKARALVHAGAKEIRITGQDTGVYGWDTN 188

Query: 75  FFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANP---SSVEVNNFQGYRKAG- 129
                  SL+ P+ +  I         +  +  + +  ANP     V       + +   
Sbjct: 189 Q----GTSLL-PELLDRI------CSDIDGDFRVRVGMANPKGLHGVREELAAVFAEHDE 237

Query: 130 -VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQ 186
             N I   VQS  +  L  + R H  SE +  +    +   +  +S D I   P +    
Sbjct: 238 LYNFIHAPVQSGSDDVLADMRRQHAVSEYLEVVETLDDQLDYWTLSTDFIVGFPTEEPAD 297

Query: 187 WEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            E  +        + +++ + +   GT    M
Sbjct: 298 HEQSMALLRETRPEKINVTRFSKRPGTDADNM 329


>gi|325968873|ref|YP_004245065.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708076|gb|ADY01563.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 362

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 15/180 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  C +C F     R     E +  S    ++ +  +     I  +   GG    ++ +
Sbjct: 64  CVIACRFCAFY----RLPGHPEAYTLSAEEALRRVMAIDREFGIRQVLIQGGINPELDIE 119

Query: 88  NIALILDGIAKNWTVS-----SNVEITIEANPSSVE-VNNFQGYRKAGVNRIS-LGVQSL 140
               +   +            S +EI   A    +         R++G++ ++  G + L
Sbjct: 120 YYERLFKALKAKLPHVAIHGLSPIEIDYLARKHRMSYRETLDRLRESGMDTLAGGGGEIL 179

Query: 141 EEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  + +   H  +    +  +  A  +    +  ++Y    +T++     L R +   
Sbjct: 180 VDRVRKIIA-PHKIDTDTWLNIMETAHKMGIMSNATMMYGHV-ETISDQAEHLYRIIELQ 237


>gi|254974871|ref|ZP_05271343.1| radical SAM-superfamily protein [Clostridium difficile QCD-66c26]
 gi|255092258|ref|ZP_05321736.1| radical SAM-superfamily protein [Clostridium difficile CIP 107932]
 gi|255313998|ref|ZP_05355581.1| radical SAM-superfamily protein [Clostridium difficile QCD-76w55]
 gi|255516678|ref|ZP_05384354.1| radical SAM-superfamily protein [Clostridium difficile QCD-97b34]
 gi|255649777|ref|ZP_05396679.1| radical SAM-superfamily protein [Clostridium difficile QCD-37x79]
 gi|260682934|ref|YP_003214219.1| radical SAM-superfamily protein [Clostridium difficile CD196]
 gi|260686532|ref|YP_003217665.1| radical SAM-superfamily protein [Clostridium difficile R20291]
 gi|260209097|emb|CBA62258.1| radical SAM-superfamily protein [Clostridium difficile CD196]
 gi|260212548|emb|CBE03514.1| radical SAM-superfamily protein [Clostridium difficile R20291]
          Length = 444

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           P S+     Q  +K     +   + +Q      L+ + R     + +  I+L R+  P  
Sbjct: 237 PESITEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKEDILNKINLIRSNIPDA 296

Query: 172 SF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
                +I   P +T   ++  +        D L  +  + E+ T   ++    D  +  +
Sbjct: 297 ILRTTIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHIDEEVKIQ 356

Query: 230 N---VAVDLYNLTQSITSAHGLHAYEI 253
               + +    +++ +        YE+
Sbjct: 357 RRDTLMMIQQKISEELNDKKIGKTYEV 383


>gi|158523241|ref|YP_001531111.1| MiaB-like tRNA modifying enzyme YliG [Desulfococcus oleovorans
           Hxd3]
 gi|238065334|sp|A9A0B5|RIMO_DESOH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|158512067|gb|ABW69034.1| MiaB-like tRNA modifying enzyme YliG [Desulfococcus oleovorans
           Hxd3]
          Length = 440

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 16/186 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C ++C YC     + R +  Q +   + +          G + +          G   S 
Sbjct: 155 CDRRCTYC----IIPRLRGRQRSRPPADIVVEARGLVAAGAKELVLVAQETTAYGADLS- 209

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
             P ++A +L  ++    V       +  +P +++ +  +    R    +   + VQ   
Sbjct: 210 -PPVSLASLLMALSDA--VGDIWVRVLYMHPDTMDPDLIRVMTERDNLCSYFDVPVQHAS 266

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ +GR H A++        R   P       ++   P +    +E  L      A 
Sbjct: 267 DRVLKRMGRRHTAADLHRLFDDIRRADPDAVLRTTVLVGFPGEKPADFEKLLDFITGVAF 326

Query: 200 DHLSLY 205
           DHL  +
Sbjct: 327 DHLGAF 332


>gi|107022248|ref|YP_620575.1| radical SAM family protein [Burkholderia cenocepacia AU 1054]
 gi|116689193|ref|YP_834816.1| radical SAM domain-containing protein [Burkholderia cenocepacia
           HI2424]
 gi|170732497|ref|YP_001764444.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia cenocepacia MC0-3]
 gi|105892437|gb|ABF75602.1| Radical SAM [Burkholderia cenocepacia AU 1054]
 gi|116647282|gb|ABK07923.1| Radical SAM domain protein [Burkholderia cenocepacia HI2424]
 gi|169815739|gb|ACA90322.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Burkholderia cenocepacia MC0-3]
          Length = 473

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 89/244 (36%), Gaps = 19/244 (7%)

Query: 22  YVHWPF--------CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS 73
           Y+++P+        C  +C +C +   V  ++  +   +++ L E +W+R          
Sbjct: 192 YLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHR-YRTRSVENVLAEAKWIRDNMPEVKELM 250

Query: 74  IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRI 133
                 T  L   + IA+ L  +   W+ ++   +  ++          +  ++ G+  +
Sbjct: 251 FDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKS---------LKIMKENGLRLL 301

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQR 193
            +G +S ++Q L  + +      A       + +  ++    I  LP +T    +  ++ 
Sbjct: 302 LVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEY 361

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ-SITSAHGLHAYE 252
           A       + +       GT  YK   +   +  ++ + +      Q +      L   E
Sbjct: 362 AKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRDE 421

Query: 253 ISNH 256
           I +H
Sbjct: 422 IYHH 425


>gi|23016844|ref|ZP_00056596.1| COG1032: Fe-S oxidoreductase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 439

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 62/173 (35%), Gaps = 5/173 (2%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           CP+ C F S+ R +       +++    +  M+         +  F     + I  ++ A
Sbjct: 251 CPFQCTFCSNPRMWTTRYS--LRAVDDVIAEMKHYIAHY--GATAFQLYDLTAIVKKDWA 306

Query: 91  LILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           + L     +  ++    +       +++       R+ G N +    +S   ++L  + +
Sbjct: 307 VDLCQRMIDEGIAVKWSLPSGTRSEALDEEVLTLLRQTGCNYLVYAPESGSPRTLERIKK 366

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             +  +   +  +A+ +   +  +LI   P +T       ++  L  AV    
Sbjct: 367 KISLDKLTESALIAKKVGLVIRCNLIIGFPHETRRDVFDTVRYGLYLAVQGCR 419


>gi|220904542|ref|YP_002479854.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868841|gb|ACL49176.1| RNA modification enzyme, MiaB family [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 454

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 17/180 (9%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQ---LTGPRSISSIFFGGGTPS 82
           C   C YC   F +  R+        +      ++   +   L G    +      G  +
Sbjct: 160 CDNFCAYCIVPF-TRGRQKSRSAAAILDECRAVLERGAREITLLGQNVNAFGQDKSGDGT 218

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
                  A +L  +A    +     +T   +P  +   +   + +      R+ L +Q+ 
Sbjct: 219 SF-----AQLLRQVAGLPGLERLRYVT--PHPKDMGPEDVAAFAELPQLCPRLHLPLQAG 271

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            +  LR + R ++++  +  +    A      +S DLI A P +T   ++  L    +  
Sbjct: 272 SDVVLRSMRRRYDSAAFLRLVDDLRAARPDLALSTDLIVAFPGETEEDFQDTLAMMRACN 331


>gi|150399412|ref|YP_001323179.1| radical SAM domain-containing protein [Methanococcus vannielii SB]
 gi|150012115|gb|ABR54567.1| Radical SAM domain protein [Methanococcus vannielii SB]
          Length = 438

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 86/236 (36%), Gaps = 15/236 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C+  C +C       R    +   ++  L E++ +++    R ++ I   GGT SL    
Sbjct: 168 CLGHCTFCQVPEFFGRD--IRSKPLELILNEVKALKR----RGVNRIAISGGTGSLYNFK 221

Query: 84  --IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE 141
             +   N   ++  +++      N+ I  +     ++       R   +  +  G++S  
Sbjct: 222 NSLNRDNFIEMVKSVSEIIG-KENLSIP-DMRVDYIDEEILCAIRDYSIGWVFYGIESGS 279

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            + L+ + +  N ++ + AI  A+    +++   I   P ++   + +     +   +D 
Sbjct: 280 NELLKKMKKGTNTAKNLRAIKTAKECGVKVAGSFIVGHPDESEYDYLLTKDFIVDAELDD 339

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
           + +       GT   K   +      +    V      +     +   AY++  HS
Sbjct: 340 IFISAAEPIPGTELCKTVLNTKYEE-NPTFMVHSGQYRKYGLKENEARAYDLMMHS 394


>gi|40062747|gb|AAR37641.1| molybdenum cofactor biosynthesis protein A [uncultured marine
           bacterium 439]
          Length = 331

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 19/168 (11%)

Query: 28  CVKKCPYC---DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C YC   D  +H  R +V           E+  +  L     ++ +   GG P L+
Sbjct: 23  CNYRCHYCRDEDHQTHTTRSEVLS-------FEEIVKIVGLFAELGVTKVRLTGGEP-LL 74

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
                  ILD       +    +I +  N + +  +     +  G+NR ++ + SL  + 
Sbjct: 75  RKD----ILDLTRMLGDIPGLTDIPLSTN-AHLLPSLAGKLKSHGINRANISIDSLIPER 129

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPR---MSFDLIYALPKQTMTQWEM 189
            + + R+ + +  I  I  A         ++  ++  +  + +     
Sbjct: 130 FKEITRDGDLARVIKGIDAAIAAGMSPIKLNMVVMKGVNDEEIESMID 177


>gi|255655337|ref|ZP_05400746.1| radical SAM-superfamily protein [Clostridium difficile QCD-23m63]
 gi|296451323|ref|ZP_06893063.1| MiaB family RNA modification enzyme [Clostridium difficile NAP08]
 gi|296880325|ref|ZP_06904288.1| MiaB family RNA modification enzyme [Clostridium difficile NAP07]
 gi|296259929|gb|EFH06784.1| MiaB family RNA modification enzyme [Clostridium difficile NAP08]
 gi|296428566|gb|EFH14450.1| MiaB family RNA modification enzyme [Clostridium difficile NAP07]
          Length = 444

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           P S+     Q  +K     +   + +Q      L+ + R     + +  I+L R+  P  
Sbjct: 237 PESITEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKEDILNKINLIRSNIPDA 296

Query: 172 SF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
                +I   P +T   ++  +        D L  +  + E+ T   ++    D  +  +
Sbjct: 297 ILRTTIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHIDEDVKIQ 356

Query: 230 N---VAVDLYNLTQSITSAHGLHAYEI 253
               + +    +++ +        YE+
Sbjct: 357 RRDTLMMIQQKISEELNDKKIGKTYEV 383


>gi|183982400|ref|YP_001850691.1| biotin synthase BioB [Mycobacterium marinum M]
 gi|254810737|sp|B2HQ93|BIOB_MYCMM RecName: Full=Biotin synthase
 gi|183175726|gb|ACC40836.1| biotin synthase BioB [Mycobacterium marinum M]
          Length = 349

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 26/199 (13%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F+S VR   +     I S +   +   +             G    L
Sbjct: 85  CPEDCHFCSQSGLFSSPVRSAWLD----IPSLVEAAKQTAKSGATEFCIVAAVRGPDARL 140

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---- 139
           +            A    + + VEI +  +   +     +     GV+R +  +++    
Sbjct: 141 LS--------QVAAGIEAIRNEVEINVACSLGMLTAEQVEQLAAMGVHRYNHNLETARSY 192

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                       H   E    + + R+    +    I  +  +T+ Q             
Sbjct: 193 FTNVV-----TTHTWEERWQTLTMVRDAGMEVCCGGILGM-GETLEQRAEFAANLAELDP 246

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D + L  L    GT F  +
Sbjct: 247 DEVPLNFLNPRPGTPFGDL 265


>gi|118617213|ref|YP_905545.1| biotin synthase [Mycobacterium ulcerans Agy99]
 gi|254810742|sp|A0PP05|BIOB_MYCUA RecName: Full=Biotin synthase
 gi|118569323|gb|ABL04074.1| biotin synthase BioB [Mycobacterium ulcerans Agy99]
          Length = 350

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 26/199 (13%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F+S VR   +     I S +   +   +             G    L
Sbjct: 86  CPEDCHFCSQSGLFSSPVRSAWLD----IPSLVEAAKQTAKSGATEFCIVAAVRGPDARL 141

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---- 139
           +            A    + + VEI +  +   +     +     GV+R +  +++    
Sbjct: 142 LS--------QVAAGIEAIRNEVEINVACSLGMLTAEQVEQLAAMGVHRYNHNLETARSY 193

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
                       H   E    + + R+    +    I  +  +T+ Q             
Sbjct: 194 FTNVV-----TTHTWEERWQTLTMVRDAGMEVCCGGILGM-GETLEQRAEFAANLAELDP 247

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D + L  L    GT F  +
Sbjct: 248 DEVPLNFLNPRPGTPFGDL 266


>gi|126698925|ref|YP_001087822.1| radical SAM superfamily protein [Clostridium difficile 630]
 gi|123174606|sp|Q18BJ2|RIMO_CLOD6 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|115250362|emb|CAJ68184.1| Ribosomal protein S12 methylthiotransferase [Clostridium difficile]
          Length = 444

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           P S+     Q  +K     +   + +Q      L+ + R     + +  I+L R+  P  
Sbjct: 237 PESITEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKEDILNKINLIRSNIPDA 296

Query: 172 SF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
                +I   P +T   ++  +        D L  +  + E+ T   ++    D  +  +
Sbjct: 297 ILRTTIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHIDEEVKIQ 356

Query: 230 N---VAVDLYNLTQSITSAHGLHAYEI 253
               + +    +++ +        YE+
Sbjct: 357 RRDTLMMIQQKISEELNDKKIGKTYEV 383


>gi|332520869|ref|ZP_08397329.1| MiaB-like tRNA modifying enzyme [Lacinutrix algicola 5H-3-7-4]
 gi|332043399|gb|EGI79595.1| MiaB-like tRNA modifying enzyme [Lacinutrix algicola 5H-3-7-4]
          Length = 440

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG----GGTPS 82
           C  KC YC   +      + + + + + L   + +        + + +  G    G   +
Sbjct: 152 CDYKCTYC---TIPLARGISRSDKLDNVLNNAKEISAKGIKEIVLTGVNIGDYGKGEFGN 208

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRISLGVQSL 140
                    +++ + K   +      +IE  P+ ++    +   K  A V    + +QS 
Sbjct: 209 KKHEHTFLELVEALDKVEGIERLRISSIE--PNLLKNETIEVVSKSRAFVPHFHIPLQSG 266

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R +     +  +   + + P   +  D+I   P +T   +        +  
Sbjct: 267 HNDILKLMKRRYMRELYVDRVAKIKEVMPHACIGVDVIVGFPGETDEHFLETYNFLNTLD 326

Query: 199 VDHLSLYQLTIEKGT 213
           + +L ++  +    T
Sbjct: 327 ISYLHVFTYSERDNT 341


>gi|309792044|ref|ZP_07686520.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides
           DG6]
 gi|308225937|gb|EFO79689.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides
           DG6]
          Length = 439

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 23/223 (10%)

Query: 28  CVKKCPYCDFNSH--------VRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +C +C   S         +R      E  +   + E+  + Q         +    G
Sbjct: 152 CNLRCAFCTIPSIKGDMASKPIRAVLGEVEQLVGQGVQEIVLVAQHLTDYG-RDLGLQDG 210

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS 139
             +L+  + +  I+        +       I      V   + Q         + + +Q 
Sbjct: 211 LATLL--EEMCQIVPHS-GWIRLMYAYPHGISERLIRVMAEHPQVLA-----YLDMPLQH 262

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSY 197
               +LR + R  +     A I   R   P M+     I   P +T  +++  L      
Sbjct: 263 AHPDTLRRMRRPPDTEHTRAVIQQLRAAMPDMALRSTFIVGYPGETNAEFKTLLGFLEEM 322

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
            +D +  ++ + E GT    +       +    +    + L Q
Sbjct: 323 QLDRVGAFRYSREPGTPAAGLPDQVRPKV----IERRWHELMQ 361


>gi|255100347|ref|ZP_05329324.1| radical SAM-superfamily protein [Clostridium difficile QCD-63q42]
 gi|255306284|ref|ZP_05350455.1| radical SAM-superfamily protein [Clostridium difficile ATCC 43255]
          Length = 444

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           P S+     Q  +K     +   + +Q      L+ + R     + +  I+L R+  P  
Sbjct: 237 PESITEELIQVIKKYDNICSYFDMPIQHASNNILKLMNRKTTKEDILNKINLIRSNIPDA 296

Query: 172 SF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSE 229
                +I   P +T   ++  +        D L  +  + E+ T   ++    D  +  +
Sbjct: 297 ILRTTIIVGFPGETEDDFKQLVDFVEEVKFDRLGAFAYSREEDTPADRLPNHIDEEVKIQ 356

Query: 230 N---VAVDLYNLTQSITSAHGLHAYEI 253
               + +    +++ +        YE+
Sbjct: 357 RRDTLMMIQQKISEELNDKKIGKTYEV 383


>gi|68536191|ref|YP_250896.1| hypothetical protein jk1114 [Corynebacterium jeikeium K411]
 gi|123775708|sp|Q4JV79|MIAB_CORJK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|68263790|emb|CAI37278.1| miaB [Corynebacterium jeikeium K411]
          Length = 512

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 44/113 (38%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + +A +   R  
Sbjct: 254 TSPHPAEFTDDVIDAMAETPAVCPQLHMPLQSGSDKVLKDMKRSYRSKKFLAILDKVRER 313

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   ++ D+I   P +T   ++  L             +Q +   GT   +M
Sbjct: 314 IPHAAITTDIIVGFPGETEEDFQATLDVVEKARFSSAFTFQYSPRPGTPAAEM 366


>gi|307721185|ref|YP_003892325.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM
           16294]
 gi|306979278|gb|ADN09313.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM
           16294]
          Length = 424

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 63/194 (32%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     +  Y  G    +      ++ + +L        I  G    S  +  
Sbjct: 153 CNFRCSYC-----IIPYVRGDARSMDE-NRILEQVARLAINGFGEFILTGTNVGSYGQDT 206

Query: 88  N--IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN-RISLGVQSLEEQS 144
              +A ++  +++   V      ++E  P  +     +   +  +   + + +Q      
Sbjct: 207 KTSLAKLMKKMSQIRGVRRIRLGSVE--PIQITDEFKEILDEPWMEKHMHIALQHTSPTM 264

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+ + R +   +      L  +    +  D I   P ++   W   +  A    + H+  
Sbjct: 265 LKLMNRRNVYKQDKELFELLADKGYAIGTDFITGHPGESEALWREAMINAKDLPLTHIHA 324

Query: 205 YQLTIEKGTLFYKM 218
           +  +   GT    M
Sbjct: 325 FTYSKRDGTPSAVM 338


>gi|46580962|ref|YP_011770.1| biotin synthase [Desulfovibrio vulgaris str. Hildenborough]
 gi|46450382|gb|AAS97030.1| biotin synthase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 310

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 15/219 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLI 84
           C + C +C  +SH             ++ L   + +RQ    R        G     + +
Sbjct: 53  CPEDCAFCAQSSHHATGSPVHALLDAETLLRRAEELRQSGAER-------YGIVTSGTRL 105

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             + +A + +   +   +     I +  +   +  +     ++AG +     +++     
Sbjct: 106 TVRELATLCEAAVR---IRRETGIALCGSLGQLTPDAAACLKEAGFSSYHHNLET-SRSF 161

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +   H   + IA +  AR    R     I+ +  +T  Q            VD + +
Sbjct: 162 FPAICSTHAYDDDIATVRAARAAGLRTCSGGIFGM-GETDAQRIELSATLRELDVDSIPV 220

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
             L+   GT          +          L +  + I 
Sbjct: 221 NLLSPIPGTPLQHRPTMPPMRALVSIAIYRLMHPARDIL 259


>gi|312129884|ref|YP_003997224.1| tRNA-i(6)a37 thiotransferase enzyme miab [Leadbetterella byssophila
           DSM 17132]
 gi|311906430|gb|ADQ16871.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leadbetterella byssophila
           DSM 17132]
          Length = 464

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 20/239 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTPSLI-- 84
           C   C +C     V  +  G+E     +   ++   +    +    +   G    S +  
Sbjct: 179 CNNMCSFC-----VVPFTRGRERSRDPY--SIEKEAKELFDQGYREVTLLGQNVDSYLWK 231

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
                    + + K   +  ++ I     +P  +        +K     N I L  QS  
Sbjct: 232 SETEQFTFANLLEKIALIHPDLRIRFSTSHPKDITDEVLYTMKKYDNICNYIHLPAQSGS 291

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR---MSFDLIYALPKQTMTQWEMELQRALSYA 198
            + L  + R ++    +  I   R I      +S DLI     +T    +  L       
Sbjct: 292 SRILELMNRTYDREWYLGKIDRIREILGEECGISHDLIAGFCTETEEDHQDTLTLMDYVK 351

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPS----ENVAVDLYNLTQSITSAHGLHAYEI 253
            D+  ++  +   GT   K ++D             +       +           Y I
Sbjct: 352 FDYGYMFYYSERPGTPAAKKYEDDVPEEVKKRRLNEIIAKQQEHSLERNQMTVGKVYRI 410


>gi|123495487|ref|XP_001326754.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
 gi|121909673|gb|EAY14531.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
          Length = 386

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 64/192 (33%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG-GGTPSLIEP 86
           C K C YC  NS+   + +  E  +           +    +   ++    G   S    
Sbjct: 76  CEKNCHYCGVNSY-EPFVIPHEAILDCC--------EFMWKKGYRNLVLQSGEITSKQRM 126

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +A +L+ I   +    +  + +  +   ++  +++ +   GV R  L ++S   +   
Sbjct: 127 DWVASLLEKIFSKYGKDKDTGMCVILSIGELDYKDYKRFYDLGVQRYLLRIESSNPKLYA 186

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            +    H+    +  ++  + I        +  +P QT      +++         + L 
Sbjct: 187 TMHPADHSWERRVECLNNLKKIGYVTGNGCLVGVPTQTFDDLAGDIEFFRDGHFPMIGLG 246

Query: 206 QLTIEKGTLFYK 217
              I   T   +
Sbjct: 247 PYLIHNDTKMGR 258


>gi|31790361|gb|AAP58618.1| putative 2-methylthioadenine synthetase [uncultured Acidobacteria
           bacterium]
          Length = 450

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 32/229 (13%)

Query: 28  CVKKCPYC------------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF 75
           C + C +C             F S V   +   E  ++  +   Q   +           
Sbjct: 159 CDRPCAFCFIPQMRGHFRSRRFGSIVAEAQQLAEEGVKELILVAQDSSRYGED------- 211

Query: 76  FGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNRI 133
                  L +   +A +L  ++    +       +   P+ +     +   +    V  +
Sbjct: 212 -------LGKDDALAHLLRELSHTDGIEWVR--VMYTYPTHISDGFLEVLAEEAKAVKYL 262

Query: 134 SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMEL 191
            + +Q   +  L+ + R  N +     I   R+  P ++     I   P +T   +E  L
Sbjct: 263 DMPLQHASQNVLKLMKRGGNRASLERLIKRVRDRVPEIAVRTTFITGFPGETDEDFEELL 322

Query: 192 QRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               +   D + ++  + E+GT  Y +    +  +  +  A  +    +
Sbjct: 323 TFVKNVEFDRVGVFTYSDEEGTPAYDLPNKVEPKIAKQRRARLMKEQAK 371


>gi|317133529|ref|YP_004092843.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
 gi|315471508|gb|ADU28112.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
          Length = 562

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 22/246 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C YC           G   F  +     E+  +      R +  +         + 
Sbjct: 179 CPFRCAYC------LSSLGGGARFFPLDRVRAELARVLDSPA-RQVKFVD--RTFNCRLS 229

Query: 86  -PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEE 142
             + I   +  +A+     +   +  E      +      +  A  G+ ++ +G+QS   
Sbjct: 230 RAKEIVRAVLELAEENPAIAARHVHFEVAADLFDEELLDLFASAPPGLFQLEIGIQSFHA 289

Query: 143 QSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            +L  + R  + +   AAI HL       +  DLI  LP +    +        + A   
Sbjct: 290 PTLAAVHRASDLARCAAAIAHLCAPRNVHVHTDLIAGLPLEDYMTFARSFDTLHALASHC 349

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS-ITSAHGLHAYEISNHSFLG 260
           + L  L + KG+   +M    D            Y + Q+   S   L   E +      
Sbjct: 350 IQLGFLKLLKGS---EMRAVADCTPGYLYSEKPPYQVLQTPWLSFAELGRLEDTAFCV-- 404

Query: 261 AESLHN 266
            E L+N
Sbjct: 405 -ERLYN 409


>gi|257469489|ref|ZP_05633581.1| biotin synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 328

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 16/223 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C + C YC  +SH +            +  +     +  G    S +  G G  S    L
Sbjct: 69  CSENCKYCAQSSHFKTNADVYPLVTAEYALDEAKKVEAEGAHRFSLVTSGRGLKSTSKEL 128

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +E +NI  +L         +S+            +       ++AGV      +++   +
Sbjct: 129 MELENIYKVLREKTDLMLCASH---------GICDKEALIKLKEAGVTTYHHNLET-SRE 178

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
               +   H   + +  I+ A+     +    I  L  +T            S  V  + 
Sbjct: 179 FYSNICSTHTFEDRVNTINAAKEAGLNVCSGGILGL-GETPIDRIKMAFELKSLGVFSVP 237

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH 246
           +  LT   GT    M     + L  + +AV  + L ++     
Sbjct: 238 INILTPIPGTPLEDMEGVEPMEL-VKTMAVYRFILPKTYLRYA 279


>gi|255533406|ref|YP_003093778.1| MiaB-like tRNA modifying enzyme YliG [Pedobacter heparinus DSM
           2366]
 gi|255346390|gb|ACU05716.1| MiaB-like tRNA modifying enzyme YliG [Pedobacter heparinus DSM
           2366]
          Length = 444

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 73/216 (33%), Gaps = 16/216 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                +Q  + E + +        I     + + G     +
Sbjct: 158 CNRPCSFCA---IPLMRGKHVSRDMQELVNEAKILAAGGTKELILIAQDLTYYG-----L 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           +      + + + +   V+    I ++ A PS   +        R+     + + +Q + 
Sbjct: 210 DIYGKRNLDELLRRLSDVNGIEWIRLQYAYPSGFPMEILDAMNERENICKYLDMPLQHIT 269

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     + I  ++  R+  P ++    LI   P +T   +E  +        
Sbjct: 270 DNMLKSMRRGITKQKTIDIVNQIRDKVPGIAMRTTLICGYPGETEQDFEEMMDWVEETRF 329

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL 235
           D L  +  + E+ T  + +  D    +  E V   +
Sbjct: 330 DRLGCFTYSHEEKTHAHSLVDDVPDEIKQERVDAIM 365


>gi|159041979|ref|YP_001541231.1| radical SAM domain-containing protein [Caldivirga maquilingensis
           IC-167]
 gi|157920814|gb|ABW02241.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
          Length = 358

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 62/180 (34%), Gaps = 15/180 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C F     R     E +  S    ++ + ++     I  +   GG    +  +
Sbjct: 60  CTIACSFCAFY----RPPRHPEAYTMSVDYAVKLVTEVDSRFGIRQVLVQGGINPELGIE 115

Query: 88  NIALILDGIAKNWTVS-----SNVEITIEANPSSVE-VNNFQGYRKAGVNRIS-LGVQSL 140
               +   +            S +E+   A    +      +  + AG++ ++  G + L
Sbjct: 116 YYEELFKTLKAKLPHVAIHGLSPIEVDYLARKHRMSYREVLERLKAAGMDTLAGGGGEIL 175

Query: 141 EEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++  R +   H  +A   +  + +A  +    +  ++Y    ++   W   L R +S  
Sbjct: 176 VDEVRRIIA-PHKISAETWLRVMEIAHGLGIMSNATMMYGHV-ESKAHWAEHLYRIISLQ 233


>gi|312622034|ref|YP_004023647.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202501|gb|ADQ45828.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 535

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 18/223 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC         K  +   ++    E+ ++      + +  I F   T +    +
Sbjct: 164 CPFRCSYC----LSSIEKGVRFAPLEKVFEELDYL----FKKQVRLIKFVDRTFNA-NKE 214

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLEEQSL 145
               I++   +    S   ++  E +P+ ++ +       +  +  R+ +G+QS   Q+L
Sbjct: 215 RAIKIIEFCKQK---SQATQVHFEIDPTLLDNDIISAINNSKDDLFRLEIGLQSFNPQTL 271

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
             + R  +  +    +         +   DLI  LP +    ++  L + + Y  D + L
Sbjct: 272 DAIDRFFDIDKIDKNLKKLMENKKAIVHLDLIAGLPYEDFLSFKRSLDKTILYFADEVQL 331

Query: 205 YQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITS 244
             L + KGT        +       P   V  + +   + I  
Sbjct: 332 GFLKMLKGTKIRNEATKYNYEFFKDPPYEVISNSFISFEEIYK 374


>gi|303228992|ref|ZP_07315802.1| B12 binding domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302516406|gb|EFL58338.1| B12 binding domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 581

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 17/204 (8%)

Query: 28  CVKKCPYC-DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC   N +  R+   QE  ++     +       G + +  +           P
Sbjct: 189 CPFSCQYCLSGNKNTVRF-FPQERTLKELQWFIDH-----GVKQVKFVDRTFNC----AP 238

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQS 144
            +   +++ +  +    +++   +E  P  +         +    RI +  GVQS  +++
Sbjct: 239 HHHRPLMEFMRDS---DTDMNFHLEMEPELMTEWETNILCETPPGRIQIEVGVQSTHKKT 295

Query: 145 LRFLGRNHNASEAIAAIH-LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L  + R ++      +I  + +     +  DLI  LP +   ++        S     L 
Sbjct: 296 LDAINRYNDWPYIQKSIRPIIQAGRTHVHMDLIVGLPHEDFKRFGQSFNDLFSLQPHALQ 355

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLP 227
           +  L + KG+   +M +   +  P
Sbjct: 356 IGFLKLLKGSGVRRMSEYKYVADP 379


>gi|317181612|dbj|BAJ59396.1| putative ATP-binding protein [Helicobacter pylori F57]
          Length = 437

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGARFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 DHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVH 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|221140004|ref|ZP_03564497.1| hypothetical protein SauraJ_00040 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|302751406|gb|ADL65583.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
          Length = 448

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 67/200 (33%), Gaps = 9/200 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         ++   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETINGLERIRISSIEAS--QLTDEVIDVLERSTKVVRHLHIPLQSGSDTVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +       P ++   D+I   P +T  +++      + +    L 
Sbjct: 268 KRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD 223
           ++  +   GT   +M    D
Sbjct: 328 VFPYSPRIGTPAVRMDDQID 347


>gi|189426408|ref|YP_001953585.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422667|gb|ACD97065.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 539

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 66/194 (34%), Gaps = 15/194 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---- 83
           C  +C +C            +    +S    M  +R L      + +       ++    
Sbjct: 223 CPFRCSFC-------VNNDDKRYRFRSIGNIMDEIRVLYEKYHFNILIILDELFAVHRDR 275

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           ++    AL+       W    + +    AN   ++    Q  ++AG    S G++S    
Sbjct: 276 LQQFATALLEGRARYGWDFDWSFQTHASAN---IDQATLQLAKQAGCFFFSYGIESASPT 332

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV-DHL 202
            L  + +     +  AA+ LA  +      + I+  P +T       L+    + +  H+
Sbjct: 333 VLASMNKRTQPEQIEAALKLAEQVQVGFGGNFIFGDPAETFQTALESLEFYKKHCLYAHV 392

Query: 203 SLYQLTIEKGTLFY 216
           ++  +    G+  +
Sbjct: 393 NVGSVHPYPGSRLF 406


>gi|325848955|ref|ZP_08170465.1| radical SAM protein, TIGR01212 family [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480599|gb|EGC83661.1| radical SAM protein, TIGR01212 family [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 307

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 21/214 (9%)

Query: 32  CPYC------DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C YC      DF  +        +  I   +  ++   +  G       +F   T +   
Sbjct: 46  CIYCSENGAGDFTKY-----DDLDKQIDFQINRLKKENRKEG----YMAYFQNFTSTYGN 96

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEE 142
            Q +  +  G   N  +     ++I      +            K     + LG+QS+ E
Sbjct: 97  IQKMKKLFYGAINNPNIMG---LSIATRADCLSDEVIALLDDLNKKTFLVVELGLQSVNE 153

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           +S+ F+ R ++  E    +   +    +    +I  LP + +  +  ++          +
Sbjct: 154 KSIEFINRGYSHKEFDQDLLKLKEKNIKTLAHIIIGLPNEDIDDFLNDISYINKRKFWGI 213

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLY 236
            ++ L IEKG+  +  +                Y
Sbjct: 214 KVHNLYIEKGSRIFDYYLKNQNDFTMTLDQYVDY 247


>gi|313143333|ref|ZP_07805526.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128364|gb|EFR45981.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 441

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 18/222 (8%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+ A   +M  +   ++ +      C KKC YC                I   + E + +
Sbjct: 117 YVFASSQDMGIKAHLNISI-----GCDKKCSYC---IVPFTRGKEISIPIDLLVNEAKKL 168

Query: 63  RQLTGPRSI---SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVE 118
                   +    ++   G   S   P       + +A    +     I     +P  ++
Sbjct: 169 VANGAKELLLLGQNVNHYGVRFS--TPHKKTNFTELLATLSEIEGLYRIRFTSPHPLHMD 226

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--D 174
               + + +       I + +QS   Q L+ + R ++    +  I   +++ P +    D
Sbjct: 227 DEFLEEFARNPKIAKGIHIPLQSGSSQILKMMRRGYDKQWYLDRIAKLKSLLPNVGIGTD 286

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           +I   P ++   +E  ++       D L  +  +    T  Y
Sbjct: 287 IIVGFPTESEQDFEDTMEVLSIVEFDTLYSFVYSPRPHTSAY 328


>gi|303228675|ref|ZP_07315500.1| biotin synthase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516655|gb|EFL58572.1| biotin synthase [Veillonella atypica ACS-134-V-Col7a]
          Length = 341

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C  ++H       QE       + ++  R+     +I       G  +    +
Sbjct: 78  CPENCKFCAQSAH--HNTGVQEYPFMDDESILEAARKAKEAGAIRFSIVTSGRNTSNPNE 135

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              I  +L  I +   +     + +      +        ++ GV R    +++      
Sbjct: 136 FNQILRVLKEIREKIGLEICCSLGL------LTYEQALQLKEVGVTRYHSNIET-APSHF 188

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H+  + ++ I  A+    R+    I  L  +T+ Q            +D + L 
Sbjct: 189 PDICSTHSYEDKMSTIENAKKAGIRVCSGGILGL-NETLEQRVEMAFELKRLNIDSIPLN 247

Query: 206 QLTIEKGTLF 215
            L   KGT F
Sbjct: 248 ILNPIKGTPF 257


>gi|291388708|ref|XP_002710877.1| PREDICTED: CDK5 regulatory subunit associated protein 1
           [Oryctolagus cuniculus]
          Length = 588

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 62/217 (28%), Gaps = 29/217 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------------LTGPRSISSIF 75
           C   C YC            +   + S L E++ + +            +   R  S I 
Sbjct: 259 CDNMCSYC---IVPFTRGRERSRPVASILEEVRQLSEQGLKEVTLLGQNVNSFRDNSEIQ 315

Query: 76  FGGGTPSLIE---------PQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY 125
           F    P+ +           Q        + +   +   + I     +P        Q  
Sbjct: 316 FNNAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLI 375

Query: 126 --RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
             R     +I L  QS   + L  + R ++    +  +H  R   P +S   D I     
Sbjct: 376 GERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCG 435

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +T       +        +   L+  ++ + T  Y  
Sbjct: 436 ETEEDHLQTVSLLREVRYNIGFLFAYSMRQKTRAYHR 472


>gi|94265795|ref|ZP_01289529.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93453687|gb|EAT04071.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 452

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 58/173 (33%), Gaps = 15/173 (8%)

Query: 28  CVKKCPYCDFNS---HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C   C YC + +   H  RY+  +E   +        + +L        IFF     +  
Sbjct: 188 CPYHCAYCSYPTIEGHTLRYRDPEETAAE--------VARLVAEYRARFIFFTDSVFN-- 237

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +      +L          +         P  +E  + +  ++AG+  + +G  +  +++
Sbjct: 238 DGAGHFRLLAEALIRNG--NTTPWCAFFRPQHLEREDLRLLKRAGLAAMEIGTDAACDRT 295

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           L  L +  + ++ +    LA       +  +++  P++        L      
Sbjct: 296 LAGLQKGFDFAQVLHTNRLAVEEGIACAHFVMFGGPEEDRRTLGEGLDNLSRL 348


>gi|332670088|ref|YP_004453096.1| RNA modification enzyme, MiaB family [Cellulomonas fimi ATCC 484]
 gi|332339126|gb|AEE45709.1| RNA modification enzyme, MiaB family [Cellulomonas fimi ATCC 484]
          Length = 522

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 65/202 (32%), Gaps = 16/202 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C   C +C     V   +  + +  +     +  +  L    +I     G    S     
Sbjct: 176 CNNTCTFC----IVPHLRGKERD--RRPGEILAEVEALVQQGAIEVTLLGQNVNSYGVEF 229

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +    A +L        +          +P++   +  +        + ++ + +QS  
Sbjct: 230 GDRGAFAKLLRAAGAVEGLERLRF--TSPHPAAFTDDVIEAMAATPTVMPQLHMPLQSGS 287

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           ++ LR + R++ +   +  +   R   P   ++ D+I   P +T   +   L+   +   
Sbjct: 288 DRVLRAMRRSYRSERFLGILDRVRAAMPDAAITTDVIVGFPGETEEDFAETLRVVEASRF 347

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
                +Q +   GT    +   
Sbjct: 348 SSAFTFQYSPRPGTPAADLPDQ 369


>gi|304314978|ref|YP_003850125.1| 2-methylthioadenine synthetase [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588437|gb|ADL58812.1| predicted 2-methylthioadenine synthetase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 427

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 25/209 (11%)

Query: 16  SNSLGVYVHW----PFCVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPR 69
           SN L   +H       C   C YC      R        +  +Q     ++   +     
Sbjct: 137 SNPL---IHIIQICEGCSGSCSYC-CTRFARGSIQSYPSDIIVQEAREAIEAGCREIQLT 192

Query: 70  SISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN---FQGY 125
           +  +  +G              + D I +   +  +  + +   +P+SV  +     + +
Sbjct: 193 AQDTAAYGS--------DTGERLSDLIREITEIPGDFRVRVGMMHPASVLRDLDGLVEAF 244

Query: 126 RKAGV-NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQ 182
           R   V + + L VQS  ++ LR +GR H   +    +   R+  P +S   D+I   P +
Sbjct: 245 RSEKVYSFLHLPVQSGSDRVLRDMGRGHTVDDFRMIVDRFRSRIPEISIATDIIVGYPTE 304

Query: 183 TMTQWEMELQRALSYAVDHLSLYQLTIEK 211
               +    +         + L +     
Sbjct: 305 GEDDFLDTCRLLEEVRPGFIHLSKYRHRP 333


>gi|260206040|ref|ZP_05773531.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Mycobacterium
           tuberculosis K85]
 gi|289575430|ref|ZP_06455657.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis K85]
 gi|289539861|gb|EFD44439.1| conserved alanine and arginine rich protein [Mycobacterium
           tuberculosis K85]
          Length = 512

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 27/251 (10%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L  + +++     ++   +V     C   C +C     V   +  + +  +S    +  +
Sbjct: 153 LQQFPSSLPSSRESAYAAWVSISVGCNNSCTFC----IVPSLRGREVD--RSPADILAEV 206

Query: 63  RQLTGPRSISSIFFGG---------GTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EA 112
           R L     +     G            P+L  P+N     + +     +     +     
Sbjct: 207 RSLVNDGVLEVTLLGQNVNAYGVSFADPAL--PRNRGAFAELLRACGDIDGLERVRFTSP 264

Query: 113 NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR 170
           +P+    +  +   +       + + +QS  ++ LR + R++ A   +  I   R   P 
Sbjct: 265 HPAEFTDDVIEAMAQTRNVCPALHMPLQSGSDRILRAMRRSYRAERYLGIIERVRAAIPH 324

Query: 171 --MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
             ++ DLI   P +T   +   L             +Q +   GT   ++    D  LP 
Sbjct: 325 AAITTDLIVGFPWETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAQL----DGQLPK 380

Query: 229 ENVAVDLYNLT 239
             V      L 
Sbjct: 381 AVVQERYERLI 391


>gi|289804495|ref|ZP_06535124.1| putative Fe-S oxidoreductase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 129

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 7/131 (5%)

Query: 56  LTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPS 115
             ++     L         +F   T +      + ++     +  + +S V + +   P 
Sbjct: 1   AEQLAHQAHLVNRAKRYLAYFQAYTSTF---AEVQVLRSMYQQAVSQASIVGLCVGTRPD 57

Query: 116 SVEV---NNFQGYRKAGVNRI-SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
            V     +    Y+  G      LG+Q+  +++LR + R H+ +       +AR    ++
Sbjct: 58  CVPQAVVDLLCEYKDQGYEVWLELGLQTAHDKTLRRINRGHDFACYQRTTRIARERGLKV 117

Query: 172 SFDLIYALPKQ 182
              LI  LP +
Sbjct: 118 CAHLIVGLPGE 128


>gi|218131133|ref|ZP_03459937.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697]
 gi|217986653|gb|EEC52987.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697]
          Length = 432

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 15/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHISRPIEEILDEVRYLVARGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I+    V         A P+   ++ F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIERISDVPGVEWIRLHY--AYPAHFPMDLFRVMRERSNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+    E    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 DKMRRHVTKEETYRLIEKFREEVPGIHLRTTLMVGHPGETEADFEELKEFVRKVRFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  + E+GT  Y      D V P    A         + S     + E+S 
Sbjct: 322 AFAYSEEEGT--YAAAHYEDAVPPEVKQAR-----LDELMSIQQGISAELSA 366


>gi|194337808|ref|YP_002019602.1| Biotin synthase [Pelodictyon phaeoclathratiforme BU-1]
 gi|254810765|sp|B4SGZ7|BIOB_PELPB RecName: Full=Biotin synthase
 gi|194310285|gb|ACF44985.1| Biotin synthase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 337

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 5/185 (2%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C  + H  R  +   + + +    ++         S   I   G     I P+    
Sbjct: 80  CRFCAQSRH-NRADIEVYDLVDAESVLIEARNCFAEGVSHFGIVTSGYGYKRINPE-FQR 137

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN 151
           +LD I +        E+++ A+   +     +     G+   ++ +Q + ++    +   
Sbjct: 138 VLDMIDRLH--EELPELSVCASLGMLGEEPAEALAAHGIAHYNINIQVVPDRYHDLIADT 195

Query: 152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK 211
           H+  E I  I L R     +    I  +  +TM +    +       V  + L  L   +
Sbjct: 196 HSVEERIETIKLLRKNNISVCCGGIMGV-GETMQERIAMIFALQELDVSVIPLNVLVPIE 254

Query: 212 GTLFY 216
           GT   
Sbjct: 255 GTPLA 259


>gi|329115190|ref|ZP_08243945.1| Putative methyltransferase [Acetobacter pomorum DM001]
 gi|326695633|gb|EGE47319.1| Putative methyltransferase [Acetobacter pomorum DM001]
          Length = 489

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 27/219 (12%)

Query: 32  CPY-CDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           CP+ CDF S  R Y  G+  +  +   + E++ ++            FGG          
Sbjct: 221 CPFVCDFCSE-RFYLGGRYRWRPVDEMVNELKLIKNRGSHFFFGESNFGGKK-------- 271

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
            +  ++ +     +         +N   ++       RK+GV  +++G++S+++  L  +
Sbjct: 272 -SRAMELMEGLVPLGIRWSTLWSSNLC-LDKEFLDLARKSGVMHVNIGIESIDKDILDGM 329

Query: 149 G-------RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
                   R H            R      S + I+    +    +   +     + V  
Sbjct: 330 RKGWNKASRYH------EMFENLRQRDISYSLNFIFGFDDEDHDIYRATISFLEEHKVPA 383

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
                LT  KGT  +   +    ++ +  +      + Q
Sbjct: 384 AYFNILTPTKGTALFNRMEKAGRIINAPEIDRWPGQICQ 422


>gi|288817802|ref|YP_003432149.1| 2-methylthioadenine synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787201|dbj|BAI68948.1| 2-methylthioadenine synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751400|gb|ADO44883.1| RNA modification enzyme, MiaB family [Hydrogenobacter thermophilus
           TK-6]
          Length = 433

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 12/196 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C K C YC     V + +  Q +  +S  + ++ +R L     +  +   G   +     
Sbjct: 156 CDKNCTYC----VVPKTRGRQRS--RSLESILKEVRDLVSD-GVKEVHLLGQNVTAWGKD 208

Query: 88  NIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
                 + + +   +     I     +P  ++    +   +       I L  Q+  ++ 
Sbjct: 209 IGKHFSELLYRVAEIDGVERIRFTTGHPKDLDEGIAKAMGEIKKVCEHIHLPFQAGSDRI 268

Query: 145 LRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +   E +  I + +        S D+I   P +T   +E  L        + +
Sbjct: 269 LKLMDRGYTKEEYLEKISMLKEYVKGITFSTDVIVGFPTETEEDFEETLDMLKKVRFEQV 328

Query: 203 SLYQLTIEKGTLFYKM 218
             ++ +    T  Y M
Sbjct: 329 FSFKFSPRPDTPAYSM 344


>gi|326204097|ref|ZP_08193958.1| cobalamin B12-binding domain protein [Clostridium papyrosolvens DSM
           2782]
 gi|325985864|gb|EGD46699.1| cobalamin B12-binding domain protein [Clostridium papyrosolvens DSM
           2782]
          Length = 581

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 10/172 (5%)

Query: 94  DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRN 151
           + +    +++       EA     +       R+A   RI L  G+Q++  Q+L+ + R 
Sbjct: 241 EVLRFLISLNCETVFHFEAAADLFDCEMLDILREAPKGRIQLEIGIQTINTQTLKEIDRV 300

Query: 152 HNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIE 210
            +       +    +     +  DLI  LP +    ++       +     L L  L + 
Sbjct: 301 TDIDVLTKNVQKILSAGNIHVHLDLIAGLPYENFEGFQKSFNYVYNLRPHQLQLGFLKML 360

Query: 211 KGTLFYKMHKDGDLVL---PSENVAVDLYNLTQSIT----SAHGLHAYEISN 255
           KG+      ++ D          V  + Y     I            Y  S 
Sbjct: 361 KGSRIRTESEEHDFYFRDYAPYEVLKNKYISYDEILLLKDIEETFERYYNSG 412


>gi|269791762|ref|YP_003316666.1| Radical SAM domain-containing protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099397|gb|ACZ18384.1| Radical SAM domain protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 352

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 59/195 (30%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C YC     N  + RY++ +E  ++     +             S+    G     
Sbjct: 70  CSGRCLYCGLRADNRDLARYRMEEEEIVRCAEEAI--------GAGYMSLVLQSG----- 116

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
                            +    ++ I  +       +++  R+AG +R  +  ++ ++  
Sbjct: 117 -EDGWYDRWTLGRVIERIKGIKDVAITLSIGERSYEDYRYLRQAGADRFLMKHETADQGL 175

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L  + +    +  +   + +  ++    +  LP QT+     ++       VD   +
Sbjct: 176 YDRLHPHSSFRRRLECLTQLKELGYQVGSGFMVGLPGQTLRSIARDVLLLKKLDVDMAGI 235

Query: 205 YQLTIEKGTLFYKMH 219
                   T      
Sbjct: 236 GPFVPHPRTPLGDQP 250


>gi|110598248|ref|ZP_01386524.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium ferrooxidans DSM 13031]
 gi|110340163|gb|EAT58662.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium ferrooxidans DSM 13031]
          Length = 546

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+         F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSPKL---FVDEIEV---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      NV   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRKLNVSWGINTRVTDIMRDADLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKYAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|254973965|ref|ZP_05270437.1| putative biotin synthase [Clostridium difficile QCD-66c26]
 gi|255091351|ref|ZP_05320829.1| putative biotin synthase [Clostridium difficile CIP 107932]
 gi|255313009|ref|ZP_05354592.1| putative biotin synthase [Clostridium difficile QCD-76w55]
 gi|255515768|ref|ZP_05383444.1| putative biotin synthase [Clostridium difficile QCD-97b34]
 gi|255648861|ref|ZP_05395763.1| putative biotin synthase [Clostridium difficile QCD-37x79]
 gi|260682077|ref|YP_003213362.1| putative biotin synthase [Clostridium difficile CD196]
 gi|260685675|ref|YP_003216808.1| putative biotin synthase [Clostridium difficile R20291]
 gi|306518978|ref|ZP_07405325.1| biotin synthase [Clostridium difficile QCD-32g58]
 gi|260208240|emb|CBA60623.1| putative biotin synthase [Clostridium difficile CD196]
 gi|260211691|emb|CBE01981.1| putative biotin synthase [Clostridium difficile R20291]
          Length = 325

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 15/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLT--GPRSISSIFFGGGTPSLI 84
           C + C +C  +SH   YK G E + +  +   +   +++   G    S +  G G    +
Sbjct: 69  CSEDCKFCAQSSH---YKTGVEEYSLLDYNEILNRAKEMESKGVHRFSLVTSGKG----M 121

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
             +    IL+       +  N  + + A+   ++    +  + AGV      V++  +  
Sbjct: 122 SGKEFNNILNI---YEGLRENTNLKLCASLGIIDYEQAKMLKSAGVTTYHHNVETCRDNF 178

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              +   H   + I  I  A+     +    I  +  ++  Q    +       V    +
Sbjct: 179 -HNICTTHTYKDRIKTIKDAKKAGLDVCVGGIIGM-NESEEQRLKMVFEIRELNVKSFPI 236

Query: 205 YQLTIEKGTLFYK 217
             L   K T    
Sbjct: 237 NILNPIKNTPMEN 249


>gi|317012111|gb|ADU82719.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori Lithuania75]
          Length = 437

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEISGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|303230309|ref|ZP_07317074.1| biotin synthase [Veillonella atypica ACS-049-V-Sch6]
 gi|302515020|gb|EFL56997.1| biotin synthase [Veillonella atypica ACS-049-V-Sch6]
          Length = 341

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 12/190 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C  ++H       QE       + ++  R+     +I       G  +    +
Sbjct: 78  CPENCKFCAQSAH--HNTGVQEYPFMDDESILEAARKAKEAGAIRFSIVTSGRNTSNPNE 135

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
              I  +L  I +   +     + +      +        ++ GV R    +++      
Sbjct: 136 FNQILRVLKEIREKIGLEICCSLGL------LTYEQALQLKEVGVTRYHSNIET-APSHF 188

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             +   H+  + ++ I  A+    R+    I  L  +T+ Q            +D + L 
Sbjct: 189 PDICSTHSYEDKMSTIENAKKAGIRVCSGGILGL-NETLEQRVEMAFELKRLNIDSIPLN 247

Query: 206 QLTIEKGTLF 215
            L   KGT F
Sbjct: 248 ILNPIKGTPF 257


>gi|302832307|ref|XP_002947718.1| hypothetical protein VOLCADRAFT_57473 [Volvox carteri f.
           nagariensis]
 gi|300267066|gb|EFJ51251.1| hypothetical protein VOLCADRAFT_57473 [Volvox carteri f.
           nagariensis]
          Length = 453

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 20/233 (8%)

Query: 2   KYLSAYENNMTGQGSNSLGVYVHWPF-CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ 60
           + ++  E+  T +  +++  +V+  + C +KC YC            Q         EM 
Sbjct: 115 EQVAVEEDITTPRRESNITAWVNVIYGCNEKCTYC---VVPYTRGAEQSRRPDDIRREML 171

Query: 61  WMRQLTGPRSISSI-----FFGGGTPSLI---EPQNIALILDGIAKNWTVSSNVEITIEA 112
            + +  G + ++ +      +G   P L      +      D +     V     I    
Sbjct: 172 ALGE-AGYKEVTLLGQNIDAYGRDLPGLAADASGRRAWTFTDLLRHVHDVPGIERIRFAT 230

Query: 113 -NPSSVEVNN--FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
            +P      +   +   +         +  QS +   LR + R +      A I   R  
Sbjct: 231 SHPRYFTGKHRLVRACAELPKLCEFFHIPFQSGDNDILREMKRGYTHERYRAIIDNIRRY 290

Query: 168 FP--RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   +S D I   P +T  Q+    +       D ++    +    T   + 
Sbjct: 291 MPDASISGDAIVGFPGETEEQYLATERLVREVGFDRVNTAAYSPRPNTPAAEW 343


>gi|260578158|ref|ZP_05846078.1| biotin synthase [Corynebacterium jeikeium ATCC 43734]
 gi|258603697|gb|EEW16954.1| biotin synthase [Corynebacterium jeikeium ATCC 43734]
          Length = 345

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 62/202 (30%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR  ++     I   +   +   +             G     
Sbjct: 81  CPEDCHFCAQSGLFESPVRSIQLD----IAQLIEAAKQTAKTGATEFCIVAAVKG----- 131

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE-- 141
              +++            + + V+I I A+   +        ++ GV+R +  +++ +  
Sbjct: 132 -PDEDLMN--QMAKAIAAIQAEVDINIAASIGILTQEQVDRLKELGVHRYNHNLETCKSY 188

Query: 142 -EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             + +      H   E  + + + R+    +    I  +  +T+ Q         +    
Sbjct: 189 FPEVVT----THTWEERTSTLEMVRDAGMEVCCGGIVGM-GETVEQRAEFAIDLQNLDPT 243

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L       GT F  +    
Sbjct: 244 EVPLNFFDPRPGTPFADLEPMP 265


>gi|197121922|ref|YP_002133873.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Anaeromyxobacter sp. K]
 gi|229890440|sp|B4UK35|MIAB_ANASK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|196171771|gb|ACG72744.1| RNA modification enzyme, MiaB family [Anaeromyxobacter sp. K]
          Length = 464

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 18/232 (7%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +C     V   R +     F               G R ++    G    S   
Sbjct: 180 CDNVCAFC----IVPHTRGREVSRPFPDVVAECAALAG--VGVREVT--LIGQNVNSYTG 231

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
               A +L  +A    +      T  ++P  +     + +R     +    L VQS  + 
Sbjct: 232 GCTFADLLRRVAAVPGIDRIRFTT--SHPHDLSDALVEVFRDEPKVMPHFHLPVQSGSDA 289

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R+++ +E +      R   P ++   D I   P +T   +E  L        + 
Sbjct: 290 VLRRMRRDYSVAEYLDRFDRLRAARPGIAITTDFIVGFPGETDADFEASLALLERARFEQ 349

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
              +  +    T+                 A       + + +A    A EI
Sbjct: 350 SFSFVFSPRPHTVAAVRLGSAPEWRDVPREAAVAR--LERLLAAQRRIAGEI 399


>gi|72382710|ref|YP_292065.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Prochlorococcus marinus str. NATL2A]
 gi|123732603|sp|Q46JG6|MIAB_PROMT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|72002560|gb|AAZ58362.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prochlorococcus marinus
           str. NATL2A]
          Length = 463

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 11/203 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC   S   + +      I+S + ++             +I   G        +
Sbjct: 170 CNERCTYCVVPSVRGKEQSRTPEAIKSEVEDLAKSGYKEITLLGQNIDAYGRDFQSQNKE 229

Query: 88  N-----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
           +     ++ +L  I     +      T  ++P            +         +  QS 
Sbjct: 230 DSAQVTLSYLLKYIHDIEGIERIRFAT--SHPRYFTKELIDTCSELPKVCEHFHIPFQSG 287

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYA 198
             + L+ +GR +        I+  +   P+  +S D I A P ++ T +E  L       
Sbjct: 288 SNKILKNMGRGYTIESYKNIINYIKAKIPKAAISGDAIVAFPGESETDYEQTLSLIDEIK 347

Query: 199 VDHLSLYQLTIEKGTLFYKMHKD 221
            DH++    +    T      + 
Sbjct: 348 FDHVNTAAYSPRPNTPAATWPRQ 370


>gi|68535757|ref|YP_250462.1| biotin synthase [Corynebacterium jeikeium K411]
 gi|123734607|sp|Q4JWG3|BIOB_CORJK RecName: Full=Biotin synthase
 gi|68263356|emb|CAI36844.1| biotin synthase [Corynebacterium jeikeium K411]
          Length = 357

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 62/202 (30%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR  ++     I   +   +   +             G     
Sbjct: 93  CPEDCHFCAQSGLFESPVRSIQLD----IAQLIEAAKQTAKTGATEFCIVAAVKG----- 143

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLE-- 141
              +++            + + V+I I A+   +        ++ GV+R +  +++ +  
Sbjct: 144 -PDEDLMN--QMAKAIAAIQAEVDINIAASIGILTQEQVDRLKELGVHRYNHNLETCKSY 200

Query: 142 -EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             + +      H   E  + + + R+    +    I  +  +T+ Q         +    
Sbjct: 201 FPEVVT----THTWEERTSTLEMVRDAGMEVCCGGIVGM-GETVEQRAEFAIDLQNLDPT 255

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L       GT F  +    
Sbjct: 256 EVPLNFFDPRPGTPFADLEPMP 277


>gi|152976740|ref|YP_001376257.1| RNA modification protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025492|gb|ABS23262.1| RNA modification enzyme, MiaB family [Bacillus cytotoxicus NVH
           391-98]
          Length = 450

 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 13/234 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + + Q +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDGKEVIKQAQQLVDAGYKEIVLTGIHTGGYGEDMKDY 209

Query: 88  NIALIL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLEEQS 144
           N+A +L D  A+   +      +IEA+   +     +   K+ V    + + +QS     
Sbjct: 210 NLAGLLRDMEAEVKGLKRLRISSIEAS--QISDEVIEVLDKSKVVVRHLHIPLQSGSNTV 267

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R +        ++  +   P ++   D+I   P +T  ++              L
Sbjct: 268 LKRMRRKYTMEFFQERLNRLKEALPGLAITSDVIVGFPGETEEEFMETYNFIKENRFSEL 327

Query: 203 SLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDL---YNLTQSITSAHGLHAYEI 253
            ++  +   GT   +M       + +E V   +     L +   S       EI
Sbjct: 328 HVFPYSKRTGTPAARMEDQIPEEVKNERVHRLIELSNQLAKEYASQFEGEVLEI 381


>gi|319902104|ref|YP_004161832.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
           helcogenes P 36-108]
 gi|319417135|gb|ADV44246.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
           helcogenes P 36-108]
          Length = 432

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 8/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       ++       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGKHVSRPMEEILDEVKYLVAEGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I++   V         A P+   +  F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIEHISEIPGVEWIRLHY--AYPAHFPMELFRVMRERSNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+   +E    I   RN  P +     L+   P +T   +E           D + 
Sbjct: 262 MRMRRHVTKAETYQLIEKFRNEVPGIHLRTTLMVGYPGETEADFEELKDFVHKVRFDRMG 321

Query: 204 LYQLTIEKGTL 214
            +  + E+GT 
Sbjct: 322 AFAYSEEEGTY 332


>gi|298736784|ref|YP_003729314.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Helicobacter pylori B8]
 gi|298355978|emb|CBI66850.1| bifunctional enzyme involved in thiolation and methylation of tRNA
           [Helicobacter pylori B8]
          Length = 426

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 137 CDKKCAYC-----IVPHTRGKEISIPMDLILREAEKLAN-NGTKELMLLGQNVNNYGARF 190

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 191 SSEHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDRFLERFAKNPKVCKSIHMPLQ 248

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 249 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 308

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 309 VRFDTLYSFIYSPRPFT 325


>gi|150021041|ref|YP_001306395.1| MiaB-like tRNA modifying enzyme YliG [Thermosipho melanesiensis
           BI429]
 gi|238066621|sp|A6LM59|RIMO_THEM4 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|149793562|gb|ABR31010.1| MiaB-like tRNA modifying enzyme YliG [Thermosipho melanesiensis
           BI429]
          Length = 427

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 73/239 (30%), Gaps = 37/239 (15%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C + C +C   +        +   I   L E++++ +    R I  I       +     
Sbjct: 145 CDRACSFC---TIPLFKGSFKSRKIDDILKEIEFLIE----RKIKEIILVAQDTTGYGID 197

Query: 83  ----LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGV 137
                + P+ +  I D     W         +  +P  +  +  + +    V +   + V
Sbjct: 198 IYRKQMLPELLKRINDLSGDFWVR------VMYMHPDHITDDIIEAFSYDKVLKYFDIPV 251

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+  ++ L+ + R+    +  +     RN +        +I   P +T   ++  L+   
Sbjct: 252 QNGSDKILKLMNRSRKTRQLYSLFEKIRNFYSDAILRTSIIVGFPGETRKDFDETLKFIK 311

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEIS 254
               D L  +  + E+    + +                   + +           +IS
Sbjct: 312 EVKFDRLGAFIYSDEEEASSFSLSGK------------VPREIAEERLEELMDIQSQIS 358


>gi|29840033|ref|NP_829139.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
 gi|29834380|gb|AAP05017.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
          Length = 421

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 72/229 (31%), Gaps = 23/229 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +   IQ  L E+   + Q      I+ I  G         
Sbjct: 145 CNSFCSYC---IIPYLRGRSRSRPIQEILDEISGLVSQGYQEVVIAGINVGDYQ------ 195

Query: 87  QNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYR--KAGVNRISLGVQSLEEQ 143
                +   I +   +     I I   +P  V+ +        +   +   L +QS    
Sbjct: 196 DEGKSLAHLIRQVDEIKGIERIRISSIDPEDVQEDLRDVLLSGRHTCHSSHLVLQSGSNA 255

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            L+ + R ++ S+ +  +   R++ PR   + D+I   P +T   +E  L+         
Sbjct: 256 ILKRMNRKYSRSDFLDCVDALRSVDPRYAFTTDVIVGFPGETDQDFEDTLRIIEDVGFIK 315

Query: 202 LSLYQLTIEKGTLFYKM--------HKDGDLVLPSENVAVDLYNLTQSI 242
           + ++  +  + T  Y            +    L      +    + Q I
Sbjct: 316 VHIFPFSPRERTKAYTFASQLPQSVINERKKHLAHVAKEIARREMAQRI 364


>gi|62184901|ref|YP_219686.1| hypothetical protein CAB260 [Chlamydophila abortus S26/3]
 gi|62147968|emb|CAH63716.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 421

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 63/196 (32%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +   +Q  L E+   + Q      I+ I  G       + 
Sbjct: 145 CNSFCSYC---IIPYLRGRSRSRPVQEILEEISGLVSQGYREVVIAGINVG-------DY 194

Query: 87  QNIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYR--KAGVNRISLGVQSLEE 142
           Q+    L  +         +E       +P  V+ +        K   +   L +QS   
Sbjct: 195 QDQGKSLAYLISQVDEIPGIERIRISSIDPEDVQDDLRDVLLSGKHTCHSSHLVLQSGSN 254

Query: 143 QSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
             L+ + R ++  + +  +   R+       + D+I   P +T   +E  L+        
Sbjct: 255 AILKRMNRKYSRGDFLDCVEALRSADPQYTFTTDVIVGFPGETDQDFEETLRIVEDVGFI 314

Query: 201 HLSLYQLTIEKGTLFY 216
            + ++  +  + T  Y
Sbjct: 315 KVHIFPFSPRERTKAY 330


>gi|15644897|ref|NP_207067.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori 26695]
 gi|2501535|sp|P56131|MIAB_HELPY RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|2313364|gb|AAD07337.1| conserved hypothetical ATP-binding protein [Helicobacter pylori
           26695]
          Length = 437

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGARF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|296139710|ref|YP_003646953.1| biotin synthase [Tsukamurella paurometabola DSM 20162]
 gi|296027844|gb|ADG78614.1| biotin synthase [Tsukamurella paurometabola DSM 20162]
          Length = 335

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 58/196 (29%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 71  CPEDCHFCSQSGLFESPVRSAWID----IPSLVEAAKQTAKTGATEFCIVAAVRGPD--- 123

Query: 84  IEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                   +L  +A     + + V+I I  +   +        +  GV+R +  +++   
Sbjct: 124 ------KRLLSQVAAGIEAIRNEVDIQIACSLGMLTQEQVDQLKDMGVHRYNHNLETSRS 177

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
                +   H   E    + + R     +    I  +  +++ Q             D +
Sbjct: 178 HFPNVVT-THTWEERWDTLRMVREAGMEVCCGGILGM-GESLEQRAEFAANLAELEPDEV 235

Query: 203 SLYQLTIEKGTLFYKM 218
            L  L    GT F  +
Sbjct: 236 PLNFLNPRPGTPFGDL 251


>gi|255693645|ref|ZP_05417320.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
           [Bacteroides finegoldii DSM 17565]
 gi|260620570|gb|EEX43441.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
           [Bacteroides finegoldii DSM 17565]
          Length = 803

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 13/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF--GGGTPSLIE 85
           C + C +C  +SH   YK   E +      E     Q    + I+       G  PS   
Sbjct: 125 CPENCKWCAQSSH---YKTQAEVYDLLPAEECLRQAQYNEAQDINRFSLVTSGRKPS--- 178

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P+ I  + D +      SS   I + A+   +     +   +AG+ R    +++      
Sbjct: 179 PKQITQLCDTVRHMRRHSS---IQLCASLGLLNEEELRSLHEAGITRYHCNLET-APSYF 234

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             L   H   + +A +  AR +   +    I  +  +TM Q            V  + + 
Sbjct: 235 PQLCSTHTQKQKLATLAAARRVGMDICCGGIIGM-GETMEQRIEFAFILKELNVQSIPIN 293

Query: 206 QLTIEKGTLFYK 217
            L+   GT    
Sbjct: 294 LLSPIPGTPLEN 305


>gi|222480620|ref|YP_002566857.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453522|gb|ACM57787.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
           49239]
          Length = 434

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 20/202 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQEN--FIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC     + ++  G+ +   ++  + + + +           I   G    +  
Sbjct: 133 CMSNCSYC-----ITKFATGRVDSPTVEENVEKARALVHAGA----KEIRVTGQDTGVYG 183

Query: 86  PQNIALIL-DGIAKNWTVSSNVEITIE-ANP---SSVEVNNFQGYRKAG--VNRISLGVQ 138
             N    L + + +   +  +  + +  ANP     +     + +       + I   VQ
Sbjct: 184 WDNGDRKLPELLDRICDIDGDFRVRLGMANPGGIHGIHEELAEVFADNEELYDFIHAPVQ 243

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARN--IFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           S  +  L  + R H   +    +    +      +S D I   P +T    E  +     
Sbjct: 244 SGSDDVLEDMRRQHRVEKFREVVETFDDRLDHWTLSTDFIVGFPTETEADHERSMDLLAE 303

Query: 197 YAVDHLSLYQLTIEKGTLFYKM 218
              + +++ + +   GT    M
Sbjct: 304 VRPEKINVTRFSKRPGTDAADM 325


>gi|291546206|emb|CBL19314.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus sp.
           SR1/5]
          Length = 365

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 14/198 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K C YC      +     +   ++  + + + M +      I         G    L 
Sbjct: 74  CDKHCTYC---IIPKLRGKFRSVPMERLIAQAEDMAEQGVKELILVAQETTVYGKD--LY 128

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             +++ ++L  + +   +       +   P  +     +  R      + + + +Q   +
Sbjct: 129 GKKSLHILLKKLCEIRGIRWIR--ILYCYPEEIYDELIETIRDEKKICHYLDIPIQHASD 186

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR  +  E I  +   R   P +     LI   P +T    E   +       D
Sbjct: 187 RILKRMGRRTSKQELIDIVGKLRKEIPDIVLRTTLITGFPGETEEDHEELKEFVDEMEFD 246

Query: 201 HLSLYQLTIEKGTLFYKM 218
            L ++  + E+ T   +M
Sbjct: 247 RLGVFTYSPEENTPAAEM 264


>gi|170727837|ref|YP_001761863.1| radical SAM domain-containing protein [Shewanella woodyi ATCC
           51908]
 gi|169813184|gb|ACA87768.1| Radical SAM domain protein [Shewanella woodyi ATCC 51908]
          Length = 646

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 30  KKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           +KC +CD  S  ++ R+           +  ++ + + TG      +         + P+
Sbjct: 376 RKCSFCD-VSLDYIDRFDAAGA---DVLVDRIEQLIEETGETGFHFVDE------ALPPK 425

Query: 88  NIALI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  +    I +N  +S    I  E    +      Q    +G   +S G++   ++ L+
Sbjct: 426 LLFTLAKRLIERNVVISWWGNIRFE---RTFSQARCQLLADSGCIAVSGGLEVASDRLLK 482

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            + +  +            +    +   L+Y  P QT  +    L+     
Sbjct: 483 LMKKGVSVERVAQVTKSFSDAGILVHAYLMYGFPTQTEQETVDSLEMVRQM 533


>gi|332673110|gb|AEE69927.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Helicobacter pylori 83]
          Length = 437

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGTRFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD +++   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|241764105|ref|ZP_04762142.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax delafieldii
           2AN]
 gi|241366569|gb|EER61057.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidovorax delafieldii
           2AN]
          Length = 447

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 15/201 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----PRSISSIFFGGGTPS 82
           C K C YC       R +     F    +       Q         +++++     G  +
Sbjct: 155 CSKYCSYC--VVPYTRGEEVSRPFDDVLVEVAGLADQGVKEITLLGQNVNAYLGKMGGTT 212

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
             E  + AL+L+ ++    +      T  ++P+       + Y K     + + L VQ  
Sbjct: 213 --EIADFALLLEYVSDIPGIERIRYTT--SHPNEFTPRLIEAYVKLPKLASHLHLPVQHG 268

Query: 141 EEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            ++ L  + R + A E  + +    A      MS D I   P ++   +   ++      
Sbjct: 269 SDRILMAMKRGYTAMEYKSTVRKLRAIRPDLAMSSDFIVGFPGESEDDFNKMMKLIDDIH 328

Query: 199 VDHLSLYQLTIEKGTLFYKMH 219
            D+   +  +   GT    +H
Sbjct: 329 FDNSFSFIFSPRPGTPAAGLH 349


>gi|224024974|ref|ZP_03643340.1| hypothetical protein BACCOPRO_01705 [Bacteroides coprophilus DSM
           18228]
 gi|224018210|gb|EEF76208.1| hypothetical protein BACCOPRO_01705 [Bacteroides coprophilus DSM
           18228]
          Length = 259

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 17/197 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +RR     E +  S  T +   R+        +    GG  + +  +
Sbjct: 62  CHNDCLYCG----IRRSNRNIERYRLSQETILACCRE-GYELGFRTFVLQGGEDTWLTDE 116

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++  I  +W   + + +++   P+     +++ + +AG NR  L  ++        
Sbjct: 117 RAESLISAIRNSWP-DTAITLSLGERPTG----SYERFFRAGANRYLLRHETHNAAHYA- 170

Query: 148 LGRNHNASEAIA----AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             R H A  ++A     ++  + I  +    ++   P QT+     ++     +    + 
Sbjct: 171 --RLHPAGMSLANRLRCLNDLKRIGFQTGTGIMVGSPGQTLEHLVEDILFIGEFRPQMIG 228

Query: 204 LYQLTIEKGTLFYKMHK 220
           +        T F    +
Sbjct: 229 IGPFLPHHDTPFAACPR 245


>gi|217031489|ref|ZP_03436994.1| hypothetical protein HPB128_21g47 [Helicobacter pylori B128]
 gi|216946689|gb|EEC25285.1| hypothetical protein HPB128_21g47 [Helicobacter pylori B128]
          Length = 430

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 141 CDKKCAYC-----IVPHTRGKEISIPMDLILREAEKLAN-NGTKELMLLGQNVNNYGARF 194

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 195 SSEHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDRFLERFAKNPKVCKSIHMPLQ 252

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 253 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 312

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 313 VRFDTLYSFIYSPRPFT 329


>gi|146279850|ref|YP_001170008.1| hypothetical protein Rsph17025_3848 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558091|gb|ABP72703.1| hypothetical protein Rsph17025_3848 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 532

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 106/322 (32%), Gaps = 31/322 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ--WMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C +CD    V   +V +   ++  + E+Q            +   F G        
Sbjct: 195 CPYLCEFCD--IIVMFGRVPRLKTVEQVIAELQDVHDAGFRQCFLVDDNFIG-------N 245

Query: 86  PQNIALILDGIAKNW-TVSSNVEITIEANPSSVE-VNNFQGYRKAGVNRISLGVQSLEEQ 143
            +    +L  IA    T+   + ++ EA+ +  +  +     R+A  +R+ +G+++    
Sbjct: 246 KREAKRLLQAIAAWQKTLPRPLNLSTEASVNLADEPDLLDLMRQANFDRVFVGIETPNLA 305

Query: 144 SLRFLGRNHN--ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           SL+   +  N      +A +   RN    ++   I    + T   +E + +      +  
Sbjct: 306 SLKETRKTQNLRGDSLVAKVQRIRNAGLIVTGGFIVGFDEDTPEIFEAQYKFIHDSGIVM 365

Query: 202 LSLYQLTIEKGTLFY-KMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE----ISNH 256
            S+  L     T  Y ++  +G L       A     +T+    A      E        
Sbjct: 366 SSIGILAPLPTTPLYERLEAEGRLFPDDPECAFIPKQMTREQLKAGHRALIERVFAPDAF 425

Query: 257 SFLGAESLHN-LNY-----WRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRK 310
                 SLH   NY      RY        GA + +   +  + +      + +L +V  
Sbjct: 426 FERAFRSLHESQNYNTVRRQRYRP----AAGARAALGQAATWLRLLRAIASKGYLSLVAA 481

Query: 311 NGHAVVEKEFLSSEQQ-ADEFL 331
              A      L      A EFL
Sbjct: 482 YHRAWRANRDLGDRAMPAAEFL 503


>gi|317476990|ref|ZP_07936232.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii
           1_2_48FAA]
 gi|316906783|gb|EFV28495.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii
           1_2_48FAA]
          Length = 432

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 15/232 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHISRPIEEILDEVRYLVTRGVKEFQVIAQELTYYGVD--LYKKQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I+    V         A P+   ++ F+  R+       + + +Q + +  L
Sbjct: 204 MLPELIERISDVPGVEWIRLHY--AYPAHFPMDLFRVMRERSNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+    E    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 DKMRRHVTKEETYRLIEEFREEVPGIHLRTTLMVGHPGETEADFEELKEFVRKVRFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
            +  + E+GT  Y      D V P    A         + S     + E+S 
Sbjct: 322 AFAYSEEEGT--YAAAHYEDSVPPEVKQAR-----LDELMSIQQGISAELSA 366


>gi|256422109|ref|YP_003122762.1| MiaB-like tRNA modifying enzyme YliG [Chitinophaga pinensis DSM
           2588]
 gi|256037017|gb|ACU60561.1| MiaB-like tRNA modifying enzyme YliG [Chitinophaga pinensis DSM
           2588]
          Length = 435

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 24/233 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C + C +C                I+  + E + +   +G + I      + + G    L
Sbjct: 151 CNRTCSFCA---IPLMRGGHVSRPIEQLVAEAEKLVN-SGVKEIMLIAQELTYYGLD--L 204

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            + + +A +L  +A+   +         A P    +       +       I + +Q   
Sbjct: 205 YKERRLADLLRALAQVKGLEWIRLHY--AYPHKFPMEVLDVMNEFPNICKYIDMPLQHAA 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     E    I   R   P +     LI   P +T+   E   +      +
Sbjct: 263 DNMLKSMKRQITRVEMEDLITAIRAKVPGICLRTTLITGYPGETLEDVEETKRFLEKMRL 322

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
           D + ++  + E+GT  Y++    +  +P+E          Q I       + E
Sbjct: 323 DRVGVFTYSHEEGTSAYEL----EDNIPAEEKERR----AQDIMETQQEISLE 367


>gi|224436855|ref|ZP_03657844.1| hypothetical protein HcinC1_02771 [Helicobacter cinaedi CCUG 18818]
          Length = 452

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 18/222 (8%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+ A   +M  +   ++ +      C KKC YC                I   + E + +
Sbjct: 128 YVFASSQDMGIKAHLNISI-----GCDKKCSYC---IVPFTRGKEISIPIDLLVNEAKKL 179

Query: 63  RQLTGPRSI---SSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPSSVE 118
                   +    ++   G   S   P       + +A    +     I     +P  ++
Sbjct: 180 VANGAKELLLLGQNVNHYGVRFS--TPHKKTNFTELLATLSEIEGLYRIRFTSPHPLHMD 237

Query: 119 VNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--D 174
               + + +       I + +QS   Q L+ + R ++    +  I   +++ P +    D
Sbjct: 238 DEFLEEFARNPKIAKGIHIPLQSGSSQILKMMRRGYDKQWYLDRIAKLKSLLPNVGIGTD 297

Query: 175 LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFY 216
           +I   P ++   +E  ++       D L  +  +    T  Y
Sbjct: 298 IIVGFPTESEQDFEDTMEVLSIVEFDTLYSFVYSPRPHTSAY 339


>gi|237746929|ref|ZP_04577409.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Oxalobacter formigenes HOxBLS]
 gi|229378280|gb|EEO28371.1| Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           [Oxalobacter formigenes HOxBLS]
          Length = 500

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 16/203 (7%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C    +     +        + FL EM+ + Q    R   S  F   T +L  
Sbjct: 172 CPFRCEFCLSSLDKTAWTFDT------EKFLHEMETLYQ----RGARSFKFVDRTFNLNV 221

Query: 86  PQNIALILDGIAKNWTVSSN-VEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEE 142
            +++ ++   + K    S N + +  E  P  +         +   G  ++ +GVQ+   
Sbjct: 222 KRSLQILHFFLEKLENESGNPIFVHFELVPDHLPDALKDAISRFPPGTLQLEIGVQTFNP 281

Query: 143 QSLRFLGRNHNASEAIAAIHLA-RNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
           +    + R  +  ++   +    R+    +  DLI  LP + +  +     R +    D 
Sbjct: 282 EVQANISRKQDNKKSEENLRWLSRHSHAHLHADLIVGLPGEDIASFGRGFDRLVRIGPDE 341

Query: 202 LSLYQLTIEKGTLFYKMHKDGDL 224
           + +  L   +GT   +     +L
Sbjct: 342 IQVGILKRLRGTPILRHTDGYEL 364


>gi|317485140|ref|ZP_07944022.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
 gi|316923675|gb|EFV44879.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
          Length = 318

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC   S     K  + + +Q      + +        + S           EPQ
Sbjct: 46  CERNCRYCGLRSANPSLKRYRLDEVQIVEAAERAVAFGVDTLVLQSGEVHD------EPQ 99

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            IA ++D +   + V+  + +  +         ++  +++AG +R  L  ++ +      
Sbjct: 100 RIAHVVDALRTRFPVAVTLSVGEQPT------ASYALWKEAGASRFLLKHETADASLYAA 153

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L   +  ++ + A+   R     +    I  +P Q       ++  A    VD       
Sbjct: 154 LHPGYTLAQRVDALQRLRRAGYEIGSGFIVGVPGQRPETLADDILLARELHVDMCGAGPF 213

Query: 208 TIEKGTLFYKMHK 220
             +  T      +
Sbjct: 214 IPQADTPLGNEPQ 226


>gi|289423288|ref|ZP_06425096.1| biotin synthase [Peptostreptococcus anaerobius 653-L]
 gi|289156219|gb|EFD04876.1| biotin synthase [Peptostreptococcus anaerobius 653-L]
          Length = 331

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDF----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C      N+HV  Y +   + I    + ++  +      SI +          
Sbjct: 70  CSENCSFCAQSAHHNTHVDIYDILDTDQISQ--SAIKNYQDKINRFSIVTSGRK------ 121

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +    +  I     K   +     I + ++   +  + F   + AGV+R    +++  + 
Sbjct: 122 LNDSELDRICQAFKKIKDL---CPINLCSSNGLLSYDQFVKLKNAGVSRYHNNLET-SKS 177

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + +  +H   + + AI  A+    ++    I+ L  + +              VD + 
Sbjct: 178 FFKNICTSHTYEDKVNAIKAAQRAGLKICSGGIFGL-GENLDNRIEMAFALRDLDVDSVP 236

Query: 204 LYQLTIEKGTLFYK 217
           L  L     T    
Sbjct: 237 LNILNPIPNTPLEN 250


>gi|224826416|ref|ZP_03699518.1| Radical SAM domain protein [Lutiella nitroferrum 2002]
 gi|224601517|gb|EEG07698.1| Radical SAM domain protein [Lutiella nitroferrum 2002]
          Length = 637

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 30  KKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           KKC +CD  +  ++ RY+        + +  ++ +   TG      +           P+
Sbjct: 375 KKCSFCD-VTLDYISRYETASAA---TLVDRIEAIIAETGQTGFHFVDEAA------PPK 424

Query: 88  NIALILDGI-AKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
            +  + + +  +N ++S    I  E    S      Q   ++G   IS G++   ++ L+
Sbjct: 425 MLRALAEELLRRNVSISWWGNIRFE---KSFTPELCQLLAESGCIAISGGLEVASDRLLK 481

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            + +  +  +              +   L+Y  P QT+      L+     
Sbjct: 482 LMKKGVSVEQVARVTQGFTEAGILVHAYLMYGFPTQTVQDTVDALEYVRQL 532


>gi|51892771|ref|YP_075462.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
           14863]
 gi|81388877|sp|Q67NX5|RIMO_SYMTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|51856460|dbj|BAD40618.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
           14863]
          Length = 485

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 12/216 (5%)

Query: 35  CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLIEPQNIAL 91
           C F S        +   I+S + E + +  +     +       + G    L     +A 
Sbjct: 176 CAFCSIPLMRGRHRSRPIESIVDEARRLAGMGVRELVVISQDTTYYGLD--LYRKPMLAR 233

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLG 149
           +L  +A+   +   + I     P+ +     +        +N + L +Q    + LR + 
Sbjct: 234 LLRELAQVDGIRW-IRIHYS-YPTRITDELIEVIVTEPKVLNYLDLPLQHGSNRVLRIMN 291

Query: 150 RNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           R  NA   +  +   R   P +      I   P +T   +E+ L    +   DH+ ++  
Sbjct: 292 RPANAEGYLRLVQKLRERVPDICLRSTFIAGHPGETEEDFELLLDFLRACEFDHVGVFAY 351

Query: 208 TIEKGTLFYKM-HKDGDLVLPSENVAVDLYNLTQSI 242
           + E+GT   +M     ++ L   + A+++       
Sbjct: 352 SQEEGTKAGQMEQLPEEVRLARRDRAMEVQQEIARR 387


>gi|332667876|ref|YP_004450664.1| Radical SAM domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336690|gb|AEE53791.1| Radical SAM domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 732

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 12/168 (7%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIA 90
           KC +CD    +   K+ +    Q     M+ M Q TG      +           P  + 
Sbjct: 361 KCTFCD--ISLDYIKLYEPVAAQLLCDRMEEMIQQTGQHGFHFVDEAA------PPALMR 412

Query: 91  LI-LDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG 149
            + L+ I +  TV+    I  E N      +  Q  + +G   +S G++   ++ L  + 
Sbjct: 413 ALALEIIRRKLTVTWWTNIRFEKN---FTRDLCQLLKASGCIAVSGGLEVASDRLLELIQ 469

Query: 150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           +    ++              +   L+Y  P QT  +    L+     
Sbjct: 470 KGVTVAQVAKVTRNFTEAGIMVHAYLMYGFPTQTAQETIDSLEMVRQM 517


>gi|315226650|ref|ZP_07868438.1| tRNA-I(6)A37 thiotransferase [Parascardovia denticolens DSM 10105]
 gi|315120782|gb|EFT83914.1| tRNA-I(6)A37 thiotransferase [Parascardovia denticolens DSM 10105]
          Length = 501

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 88/258 (34%), Gaps = 13/258 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQW 61
           L  + + +    ++ +  +V     C   C +C   S   R +  +  + +      +  
Sbjct: 180 LDYFPSQLPVSRASRVSAWVAISMGCNNTCTFCIVPSVRGRERDRRPGDVLDEIQRCVDA 239

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +       +   +G    S+ +    + +L    K   +          +P++   + 
Sbjct: 240 GSKEVTLLGQNVNSYGY---SMGDRYAFSKLLRACGKIDGLERVRF--TSPHPAAFTDDV 294

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIY 177
            +   +    ++++ + +QS  ++ LR + R++  ++ +  +    A     ++S D+I 
Sbjct: 295 IEAMAETPNVMHQLHMPLQSGSDRILRAMRRSYRTAKFMDILGKVRAAMPDAQISTDVIV 354

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD--L 235
             P +T   ++  L             ++ +   GT    + +    V+      +    
Sbjct: 355 GFPGETEEDFQRTLDLISQARFASAYTFEYSPRPGTPAALLPQIPADVMRDRYTRLHDLQ 414

Query: 236 YNLTQSITSAHGLHAYEI 253
             +T+    A      E+
Sbjct: 415 EEITEEGLKAFRGKEVEV 432


>gi|294787007|ref|ZP_06752261.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parascardovia denticolens
           F0305]
 gi|294485840|gb|EFG33474.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parascardovia denticolens
           F0305]
          Length = 481

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 88/258 (34%), Gaps = 13/258 (5%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQW 61
           L  + + +    ++ +  +V     C   C +C   S   R +  +  + +      +  
Sbjct: 160 LDYFPSQLPVSRASRVSAWVAISMGCNNTCTFCIVPSVRGRERDRRPGDVLDEIQRCVDA 219

Query: 62  MRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121
             +       +   +G    S+ +    + +L    K   +          +P++   + 
Sbjct: 220 GSKEVTLLGQNVNSYGY---SMGDRYAFSKLLRACGKIDGLERVRF--TSPHPAAFTDDV 274

Query: 122 FQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIY 177
            +   +    ++++ + +QS  ++ LR + R++  ++ +  +    A     ++S D+I 
Sbjct: 275 IEAMAETPNVMHQLHMPLQSGSDRILRAMRRSYRTAKFMDILGKVRAAMPDAQISTDVIV 334

Query: 178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVD--L 235
             P +T   ++  L             ++ +   GT    + +    V+      +    
Sbjct: 335 GFPGETEEDFQRTLDLISQARFASAYTFEYSPRPGTPAALLPQIPADVMRDRYTRLHDLQ 394

Query: 236 YNLTQSITSAHGLHAYEI 253
             +T+    A      E+
Sbjct: 395 EEITEEGLKAFRGKEVEV 412


>gi|148974133|ref|ZP_01811666.1| hypothetical protein VSWAT3_13437 [Vibrionales bacterium SWAT-3]
 gi|145965830|gb|EDK31078.1| hypothetical protein VSWAT3_13437 [Vibrionales bacterium SWAT-3]
          Length = 256

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 57/167 (34%), Gaps = 3/167 (1%)

Query: 87  QNIALILDGIAKNWTVSSNVEITIEAN-PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
             +  +LD +   +  S  + +    N      ++  +  + AG++    G++S +   L
Sbjct: 45  DYLIKVLDKLRHTFPESRKISLYSGLNDFRRKSLSELKELKSAGLSMAYAGLESGDPVVL 104

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLS 203
             + +     +AI  + L +          I+ L     +        +       + ++
Sbjct: 105 DNIKKRMTPEQAIEGMALVKEAGIETLLSFIFGLGGCERSREHIVETTRLLNIMKPEQIA 164

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
              L I+ GT+  +   DG  ++ ++   ++         +    + 
Sbjct: 165 PMALAIQPGTILEQQVNDGTFIMSTQLQILEEEKYLLENLNIDTFYW 211


>gi|83589452|ref|YP_429461.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073]
 gi|83572366|gb|ABC18918.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073]
          Length = 450

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 16/200 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----L 83
           C + C YC     V   +    +     +     +R+L     +  +  G  T +    L
Sbjct: 154 CQEFCTYC----IVPYARGPLRSRDPELIR--AEVRRLVDAGYLEIVLTGVHTGAYGRDL 207

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVN--RISLGVQSLE 141
               ++A +L  + +   +          +P              G+      + +QS +
Sbjct: 208 AGDIDLAGLLKNLVQVPGLRRLR--ISSIDPLDFTPELKAVLTGEGIICPHFHIPLQSGD 265

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
           +  L  +GR +     +  I   R+       + D++   P +T  Q++  L      ++
Sbjct: 266 DAILGRMGRRYTGQYYLELIASLRSGRPGAAFTSDVMVGFPGETEAQFQNTLAVVKEASL 325

Query: 200 DHLSLYQLTIEKGTLFYKMH 219
             + ++  +  +GT    M 
Sbjct: 326 AGIHVFPYSPRRGTPAAAMP 345


>gi|94264310|ref|ZP_01288103.1| tRNA-i(6)A37 modification enzyme MiaB [delta proteobacterium
           MLMS-1]
 gi|93455276|gb|EAT05486.1| tRNA-i(6)A37 modification enzyme MiaB [delta proteobacterium
           MLMS-1]
          Length = 446

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 4/112 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P  +       + +         L VQS  ++ L  + R ++    +A +   R  
Sbjct: 239 TTSHPKDLSEELMAAFARLDKLCPHFHLPVQSGSDRVLARMNRKYSRESYLAKVAALRQH 298

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            P ++   D+I   P ++   +E  ++       D    ++ +        +
Sbjct: 299 CPEIAITTDIIVGFPGESEADFEQTMELLEQVRYDSAFSFKYSDRPNAAAAR 350


>gi|94269306|ref|ZP_01291426.1| tRNA-i(6)A37 modification enzyme MiaB [delta proteobacterium
           MLMS-1]
 gi|93451266|gb|EAT02157.1| tRNA-i(6)A37 modification enzyme MiaB [delta proteobacterium
           MLMS-1]
          Length = 446

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 38/112 (33%), Gaps = 4/112 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
             ++P  +       + +         L VQS  ++ L  + R ++    +  +   R  
Sbjct: 239 TTSHPKDLSEELMAAFARLDKLCPHFHLPVQSGSDRVLARMNRKYSRESYLEKVAALRQH 298

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK 217
            P ++   D+I   P ++   +E  ++       D    ++ +        +
Sbjct: 299 CPEIAITTDIIVGFPGESEADFEQTMELLEQVRYDSAFSFKYSDRPNAAAAR 350


>gi|328952122|ref|YP_004369456.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328452446|gb|AEB08275.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 437

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 71/192 (36%), Gaps = 11/192 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +      +   I   L E++ + ++T  R I  +       +L   +
Sbjct: 171 CPYHCSFC--EVPIVYGHTYRRRPIGEVLDEIKTLVKVTSLRRIYFVDD-----NLTGHR 223

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           + A  L    +   +  +   TI  +    +V      +KAG   I++G++++  +S+  
Sbjct: 224 DYAKELFKGLQPLNIHWSCLWTINTSR---DVELLDLAKKAGCYHINIGIENVCPESINS 280

Query: 148 LGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  N   E    +   R      S + ++ L   TM  ++  L+              
Sbjct: 281 IAKVQNPVEEYEWLLARLRERGLFYSLNFMFGLDGDTMALFDKTLEFVERIKAPMAFFNS 340

Query: 207 LTIEKGTLFYKM 218
           +T  +GT  ++ 
Sbjct: 341 ITPRRGTPLWEQ 352


>gi|253580717|ref|ZP_04857981.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848088|gb|EES76054.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 422

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 59/199 (29%), Gaps = 14/199 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C + C YC     +  Y  G+    +     M  +  L        +  G    S     
Sbjct: 133 CNQFCTYC-----IIPYARGRVRS-RKIAHVMDEVHALAAKGYKEVVLTGIHLSSYGVDF 186

Query: 85  EPQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
             +    +L  I     V     I +    P  +     Q             L +QS  
Sbjct: 187 PAEEKETLLSLIRAVHEVEGIERIRLGSLEPGIITEEFVQSIAALPKMCPHFHLSLQSGC 246

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAV 199
           + +L  + R + ++E      L R       ++ D+I   P +T   ++       S   
Sbjct: 247 DTTLERMNRRYRSAEYAEKCGLLRKYLGNPALTTDVIVGFPMETEEDFQDSYDFVESIHF 306

Query: 200 DHLSLYQLTIEKGTLFYKM 218
               +++ +   GT    M
Sbjct: 307 YETHIFKYSRRHGTKAAAM 325


>gi|261415032|ref|YP_003248715.1| biotin synthase [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261371488|gb|ACX74233.1| biotin synthase [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302327142|gb|ADL26343.1| biotin synthase [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 323

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 13/194 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C + C YC  +S+   Y  G   +  + +        ++        SI   G T S  +
Sbjct: 62  CSENCKYCAQSSY---YHTGAPEYKLLSADEIVADAKKKEAAGIPRYSIVTSGRTLSNRD 118

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + I+  L  + K   +S    I + A    +    F   ++AG+ R    +++      
Sbjct: 119 VEQISEALRRLKKETKLS----ICLSA--GLLNKEQFDKLKEAGLTRFHNNLETYRRHFP 172

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
                 H   + I A+  A      +    I  L  +TM              V    + 
Sbjct: 173 DVCT-THTYDDKIGALQNALAAGLEICSGGIMGL-GETMEDRIDMCLDLRKLGVKSTPVN 230

Query: 206 QLTIEKGTLFYKMH 219
            L    GT +  + 
Sbjct: 231 VLNAIPGTPYENLP 244


>gi|207091912|ref|ZP_03239699.1| putative ATP-binding protein [Helicobacter pylori HPKX_438_AG0C1]
          Length = 291

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 2   CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGTRF 55

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 56  SSEHAKVDFSDLLDKLSEIQGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQ 113

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 114 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 173

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 174 VRFDTLYSFIYSPRPFT 190


>gi|86740568|ref|YP_480968.1| radical SAM family protein [Frankia sp. CcI3]
 gi|86567430|gb|ABD11239.1| Radical SAM [Frankia sp. CcI3]
          Length = 486

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 74/205 (36%), Gaps = 29/205 (14%)

Query: 3   YLSAYENNMTGQGSNSLGVY----------VHWPFCVKKCPYCDFNSHVRRYKVGQENFI 52
           Y  A EN+  G G   + V           VH       C +C  N     ++      I
Sbjct: 245 YFQALENSSLGPGIRPMAVLETSRGCWWGEVHQ------CTFCGLNGSNINFRSKAPERI 298

Query: 53  QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA 112
              + ++    ++     + +I             ++  I   + +   +  ++ I  E 
Sbjct: 299 AHEVRDLASRHRVLDVVMVDNIL------------DMGYIDKVMPELAALDCDLRIHYEI 346

Query: 113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMS 172
              ++        R A V  +  G++SL    LR + +  +++  +  +    ++   ++
Sbjct: 347 KS-NMTREQLGRLRDANVLFVQPGIESLSSHVLRLMEKGVSSAHNVRMLRDGMDLGLSVT 405

Query: 173 FDLIYALPKQTMTQWEMELQRALSY 197
           ++++Y  P +T   ++  L++  S 
Sbjct: 406 WNILYGFPGETDEDYQSLLRKMASL 430


>gi|242309674|ref|ZP_04808829.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239523675|gb|EEQ63541.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 438

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 88/262 (33%), Gaps = 31/262 (11%)

Query: 3   YLSAYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           Y+ + + N + +G  ++ +      C K+C YC     +  +  G E  I + L  +   
Sbjct: 130 YVFSNKQNSSLKGMINISI-----GCDKQCTYC-----IVPHTRGNEISIPTHL-ILDEA 178

Query: 63  RQLTGPRSISSIFFG------GGTPSLIEPQNIALILDGIAKNWTVSSNVEITI-EANPS 115
           ++L    +   +  G      G   S   P         + +   +     I     +P 
Sbjct: 179 KKLADKGTKEILLLGQNVNNYGRRFS--SPHRKINFTQLLREISEIDGIQRIRFTSPHPL 236

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
            ++    +   K       I + +QS   + L+ + R ++    +  +   R++ P +S 
Sbjct: 237 HMDDEFIEEVAKNPKICKAIHMPLQSGSTKILQKMKRGYSKEWFLNRVEKMRSLIPHLSI 296

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
             D+I   P ++   +   L        D +  +  +    T            L +  +
Sbjct: 297 STDIIVGFPTESEEDFLETLDVLEKVRFDTMYSFIYSTRPHTQAAT-------WLENNEI 349

Query: 232 AVDLYNLTQSITSAHGLHAYEI 253
           ++    + ++  +       EI
Sbjct: 350 SLVDEEIAKNRLAILKDRHKEI 371


>gi|154498439|ref|ZP_02036817.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC
           29799]
 gi|150272507|gb|EDM99692.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC
           29799]
          Length = 449

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 11/202 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-FGGGTPSLIEP 86
           C  +C YC            +   ++S L E + +        I            L + 
Sbjct: 162 CDNRCSYC---IIPYLRGRYRSRTMESLLAEAKELADRGVKEIIVIAQDITRYGTDLYKK 218

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
           + +  +L  + K       +       P  ++ +           +  I + +Q + ++ 
Sbjct: 219 RMLGELLKELCKLPFHWVRLHY---LYPDELDDDLIDVIASEPKILKYIDIPLQHINDKL 275

Query: 145 LRFLGRNHNASEAIAAIH--LARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
           LR + R    +E +A +    AR     +   LI  LP +   ++E          ++  
Sbjct: 276 LRSMNRRGTKAEILALLDKLRARIPGLVLRTSLIAGLPGEGEEEFEELCDFLREAHIERA 335

Query: 203 SLYQLTIEKGTLFYKMHKDGDL 224
            ++Q + E+GT    M    D 
Sbjct: 336 GIFQFSPEEGTPAAVMPDQVDP 357


>gi|120435421|ref|YP_861107.1| hypothetical protein GFO_1066 [Gramella forsetii KT0803]
 gi|117577571|emb|CAL66040.1| conserved hypothetical protein [Gramella forsetii KT0803]
          Length = 448

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 67/198 (33%), Gaps = 10/198 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFG-GGTPSLIE 85
           C  KC YC   +      + + + +Q+ L     + +      + + +  G  G      
Sbjct: 158 CDYKCTYC---TIPLARGISRSDELQNVLNNAAEISEQGIKEIVLTGVNIGDYGKGEFGN 214

Query: 86  PQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
            ++    LD +     V     + I    P+ ++         +   V    + +QS  +
Sbjct: 215 KKHEHTFLDLVKALDKVEGIERLRISSIEPNLLKNETIDFVADSRTFVPHFHIPLQSGSD 274

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R + +   +  +   R + P   +  D+I   P +T   +           + 
Sbjct: 275 EILKLMRRRYLSDLYVNRVGRIRAVMPDACIGVDVIVGFPGETEEHFLETYNFLNELDIS 334

Query: 201 HLSLYQLTIEKGTLFYKM 218
           +L ++  +    T    M
Sbjct: 335 YLHVFTYSERDNTPAATM 352


>gi|78186139|ref|YP_374182.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium luteolum DSM 273]
 gi|78166041|gb|ABB23139.1| Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium luteolum DSM 273]
          Length = 546

 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       + F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KHFVDEIEV---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +      NV   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVSLCQELIDRKLNVTWGINTRVTDIMRDADLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIEENKLAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|308182443|ref|YP_003926570.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori PeCan4]
 gi|308064628|gb|ADO06520.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori PeCan4]
          Length = 437

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKELSIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEISGIERIRF--TSPHPLHMNDAFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|282858818|ref|ZP_06267963.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
 gi|282588387|gb|EFB93547.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
          Length = 450

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 8/219 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC       +++  +           Q + Q      +           L    
Sbjct: 164 CDRHCAYCAIPLITGKHRSRKME--DILQEVEQLVAQGVKEFQVIEQELTYYGVDLDGKH 221

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           +I  ++  +A    V         A P+    +      +       + +  Q + +  L
Sbjct: 222 HITELISRMADIKGVEWIRLHY--AYPNQFPFDLLDVIAQKPNVCKYLDIAFQHISDHML 279

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+ +  E I  I   R+  P +     L+   P +T   +E           + + 
Sbjct: 280 DRMHRHVSKQETINLIKEIRSRVPSIHLRTTLLVGFPGETDEDFEELKDFVREVRFERMG 339

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
            +  + E+GT   + ++D       +    +L  + Q I
Sbjct: 340 AFAYSREEGTYSAEHYEDDVPEEVKQQRLDELMAIQQEI 378


>gi|218780058|ref|YP_002431376.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218761442|gb|ACL03908.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 468

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 58/195 (29%), Gaps = 9/195 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQ--SFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC +N  ++    G+  +++  S    +     L        I F     ++ +
Sbjct: 182 CPYNCSYC-YNRALKDILKGKGRYLRRRSVTHVVDEAAYLKQTFGTKFIDFNDDIFTV-D 239

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           P  I    D  A    +              +     +   +AG   +  G++S +E   
Sbjct: 240 PDWILEFSDQYASRVKIP----FCCNVRVDRLNEQGAKALARAGCRVVKFGLESGDEHFR 295

Query: 146 R-FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
              L ++    +      +      ++    +  LP +T+ Q    ++        +   
Sbjct: 296 HTVLNKSTTDDDIRRCAKILHAAGIKIQTYNMLGLPGETLQQAMKTVRLNQEIKPYYAWC 355

Query: 205 YQLTIEKGTLFYKMH 219
                  GT   K  
Sbjct: 356 SLAQPYPGTAMAKQF 370


>gi|160933809|ref|ZP_02081197.1| hypothetical protein CLOLEP_02670 [Clostridium leptum DSM 753]
 gi|156867686|gb|EDO61058.1| hypothetical protein CLOLEP_02670 [Clostridium leptum DSM 753]
          Length = 491

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 16/208 (7%)

Query: 28  CVKKCPYCDFNSHVRR--YKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C   C YC    H  R       EN ++     + +  Q  G R  + I +       + 
Sbjct: 203 CPHNCDYCAVVRHFGRKVRTRSPENVVEDIRQAIAFHDQ--GHRRAAKILW-------LT 253

Query: 86  PQNIA--LILDGIAKNWTVSSNVEITIEANPSS---VEVNNFQGYRKAGVNRISLGVQSL 140
             N            N  + S +              +    +  ++AG   I++G++ L
Sbjct: 254 DDNFFADRDWAVSVLNAIIRSGIRYQFTVQARYEVGFDDEMLELLKEAGFCEIAMGIEFL 313

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           E+++   L +    +E + ++   +    R+    I           E      +S+ + 
Sbjct: 314 EDETFESLHKKSTYAEIVRSVENIQRHGLRVRGLFIVGADNHVKGVGERLADFVISHDIC 373

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
            + +  +    GT  YK HK+  +    
Sbjct: 374 GVLIQSMYFVPGTPVYKTHKNKLIHTDW 401


>gi|326796659|ref|YP_004314479.1| radical SAM protein [Marinomonas mediterranea MMB-1]
 gi|326547423|gb|ADZ92643.1| Radical SAM domain protein [Marinomonas mediterranea MMB-1]
          Length = 642

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 57/173 (32%), Gaps = 20/173 (11%)

Query: 30  KKCPYCDFNS--HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           +KC +CD  S  ++ RY           +  ++ + + TG      +           P+
Sbjct: 376 RKCSFCD-VSLDYIDRYDAAGA---DILVDRIEQLIEETGQTGFHFVDEAA------PPK 425

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS---SVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
            +  +      N  +   V I+   N     +      Q    +G   +S G++   ++ 
Sbjct: 426 ALFAL-----ANRLIERGVVISWWGNIRFEKTFTPERCQLLADSGCIAVSGGLEVASDRL 480

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           L+ + +  +  +         +    +   L+Y  P QT  +    L+     
Sbjct: 481 LKLMKKGVSVEQVARVTKGFSDAGILVHAYLMYGFPTQTEQETIDSLEMVRQM 533


>gi|323705384|ref|ZP_08116959.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535286|gb|EGB25062.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 437

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 68/202 (33%), Gaps = 17/202 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS----- 82
           C  KC +C     + + +     +    + ++    ++     +  +       +     
Sbjct: 154 CNNKCSFC----IIPKLRG---RYRSVKIEDLLNEAKMLAENGVKELILIAQDTTKYGID 206

Query: 83  LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYR--KAGVNRISLGVQSL 140
           +     +  +L  +A    +       + A P S+        +  +  +  I + +Q  
Sbjct: 207 IYNKYMLPTLLRKLANINGIKWIR--ILYAYPDSITDELIDEIKTNEKVLKYIDIPLQHS 264

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAV 199
            ++ LR + RN    +    I   ++I    +    I   P +T  +++   +  +    
Sbjct: 265 NDEVLRRMKRNTTRKKIEDTIEKLKSIPGMIIRTTFIVGFPGETDDEFDDLKKFIVEKKF 324

Query: 200 DHLSLYQLTIEKGTLFYKMHKD 221
           + L ++  + E+ T  Y M   
Sbjct: 325 NKLGVFTYSREEDTEAYDMQNQ 346


>gi|297192576|ref|ZP_06909974.1| radical SAM domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297151401|gb|EFH31130.1| radical SAM domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 473

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 80/258 (31%), Gaps = 37/258 (14%)

Query: 28  CVKKCPYC----------DFNSHVRRYKVGQ-ENFIQSFLTEMQWMRQLTGPRSISSIFF 76
           C   C +C           F +      + + E      L  +     L G R  +   F
Sbjct: 173 CPHHCDFCYKDAFFEGGKSFYTQTVDDALSEIERLPGRHLYFLD--DHLLGNRRFAEALF 230

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLG 136
            G              + G+ + W  +  V   ++           +   +AG+  + +G
Sbjct: 231 DG--------------MAGMGRLWQAAGTVNSVLQ-------PGLLERAVEAGLRSLFVG 269

Query: 137 VQSLEEQSLRFLGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRAL 195
            +++ + +L    +N N   +  AA+    +    ++   ++ L +     ++  ++ A+
Sbjct: 270 FETVNDANLAERRKNQNIGKDYGAAVRRLHDAGVMVNASFVFGLDQDGPDVFDRTVEWAV 329

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISN 255
              ++  + + +T    T  +K  +  D  +   +  +                  E   
Sbjct: 330 EQGIETATFHIMTPYPSTGLWKQMEAED-RIVHRDWDLYDTRHVVYRPKGMTPQQLE-DG 387

Query: 256 HSFLGAESLHNLNYWRYG 273
           +     +     N WR  
Sbjct: 388 YWRAYRDFYRWSNIWRGA 405


>gi|189347632|ref|YP_001944161.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium limicola DSM 245]
 gi|189341779|gb|ACD91182.1| magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative
           cyclase [Chlorobium limicola DSM 245]
          Length = 546

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C      RRY+       + F+ E++    L    ++         P++    
Sbjct: 205 CPFTCTFCSQWQFWRRYRARSP---KHFVDEIEI---LVKKYNVGFFILADEEPTI---- 254

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           N    +    +       V   I    + +  + +    +RKAG+  +SLG ++  + +L
Sbjct: 255 NKQKFVALCQELIDRKLGVTWGINTRVTDIMRDEDLLPFFRKAGLVHVSLGTEAASQMNL 314

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
               +     E   AI L +          +  L  +T    E   Q    +  D  +  
Sbjct: 315 NRFRKETTIDENKLAIKLLQKNGIVAEAQFVMGLEHETPETIEETYQLCKDWDPDMANWT 374

Query: 206 QLTIEKGTLFYK 217
             T    +  +K
Sbjct: 375 IYTPWPFSDLFK 386


>gi|313682137|ref|YP_004059875.1| miab-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994]
 gi|313154997|gb|ADR33675.1| MiaB-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994]
          Length = 415

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 69/194 (35%), Gaps = 11/194 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC     +  +  G    +      ++ +++L        +  G    S  + +
Sbjct: 143 CNFRCSYC-----IIPFVRGDARSMDE-AKILEQIQRLASNGFGEFVLTGTNVGSYGQGE 196

Query: 88  --NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQS 144
             NIA ++  ++    V      ++E  P  +  +  +   +  + R + + +Q   ++ 
Sbjct: 197 GRNIAELMKKMSLIRGVRRIRVGSLE--PIQINESFREILSEPWLERHLHIAIQHSSDEM 254

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           LR + R +          +  +    +  D I   P ++   W   ++   S  + H+  
Sbjct: 255 LRLMNRRNRHKSDEELFGMLHSKGFALGTDFIVGHPGESDAIWREAMENIRSLHLTHIHP 314

Query: 205 YQLTIEKGTLFYKM 218
           +  +   GT    M
Sbjct: 315 FTYSKRDGTPSASM 328


>gi|300770675|ref|ZP_07080554.1| MiaB family RNA modification enzyme [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300763151|gb|EFK59968.1| MiaB family RNA modification enzyme [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 455

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                ++  + E +++        I     + + G     +
Sbjct: 169 CNRPCSFCA---IPLMRGKHVSKPMEDLVKEAKFLASNGTKELILIAQDLTYYG-----L 220

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +      + D +     V     I ++ A PS   ++      +     N + + +Q + 
Sbjct: 221 DIYGKRNLSDLLRNLSDVDGIEWIRLQYAYPSGFPMDILDAMAERSNICNYLDMPLQHIS 280

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     + I  ++  R+  P ++    LI   P +T   ++  L+       
Sbjct: 281 DNMLKSMRRGTTKQKQIDLVNQIRDKVPDIALRTTLICGYPGETEQDFQEMLEWVEESRF 340

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D L  +  + E+ T  Y +
Sbjct: 341 DRLGCFTYSHEEKTHAYSL 359


>gi|194882251|ref|XP_001975226.1| GG22199 [Drosophila erecta]
 gi|190658413|gb|EDV55626.1| GG22199 [Drosophila erecta]
          Length = 557

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 28/258 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+ +C YC    H R        E  ++                S  +  +G    S + 
Sbjct: 222 CLNQCTYCK-TKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSL- 279

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P+ +  +++ I ++  +   +      NP  + + + +   K          + + VQS 
Sbjct: 280 PELLWQLVEVIPEHCMLRVGM-----TNPPYI-LEHLEEVAKVLQHPRVYAFLHVPVQSG 333

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +   +    +   R   P ++   D+I   P +T   +E  +     Y 
Sbjct: 334 SDSVLGEMKREYCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEADFEETMTLCAKYR 393

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY-----EI 253
              L + Q     GT   KM +    ++      +     +    +      Y     E+
Sbjct: 394 FPSLFINQFFPRPGTPAAKMERIPANLVKKRTKRLTDLFYSYEPYAKRVGEIYTVLVTEV 453

Query: 254 SNH--SFLGAESLHNLNY 269
           S+    ++G    HN +Y
Sbjct: 454 SHDKLHYVG----HNKSY 467


>gi|332662118|ref|YP_004444906.1| 30S ribosomal protein S12 methylthiotransferase rimO
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332330932|gb|AEE48033.1| Ribosomal protein S12 methylthiotransferase rimO [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 437

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 65/196 (33%), Gaps = 14/196 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                I+  + E Q + +      +     + + G    + 
Sbjct: 151 CNRTCSFCA---IPLMRGGHVSRPIEELVKEAQSLARRGVKEIMLIAQELTYYGLD--IY 205

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
           + +++  +L  +A    +         A PS   +       +     N + + +Q    
Sbjct: 206 KKRDLPRLLHALADVEGIEWIRLHY--AYPSKFPLEILDVIAERPEICNYLDMPLQHASN 263

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
             L  + R     E    I  AR   P ++    ++   P+++  +++           D
Sbjct: 264 SVLERMRRQITREETTELIQQARLRIPNLTLRTTMLVGYPQESDQEFQELCDFVQEMEFD 323

Query: 201 HLSLYQLTIEKGTLFY 216
            + ++Q + E+ T  Y
Sbjct: 324 RMGVFQYSHEESTRAY 339


>gi|291563722|emb|CBL42538.1| Fe-S oxidoreductase [butyrate-producing bacterium SS3/4]
          Length = 496

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 80/243 (32%), Gaps = 25/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV  CP+C     +  +   +    ++   ++   ++  GP             + ++ +
Sbjct: 227 CVYNCPFCG---GISNWNNYRMRSAKNVELDITHAKKNLGPE---------AEFTFLDDE 274

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVE--VNNFQGYRKAGVNRISLGVQSLEEQSL 145
                +D +    ++     I +    + V    NN           I  G ++     L
Sbjct: 275 LFTYSIDHVEDIASIFVKNNINLMGVLTHVNYFDNNIAELISKFSRSIIFGAENFNNTIL 334

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY----AVDH 201
             + +       + A  +A+N    +  + I  LP +T++   + L    +      VD 
Sbjct: 335 GSISKPQTYESIVHACRIAKNNKLNVRLECIIGLPMETVSSLALNLNIMYNLIASGTVDI 394

Query: 202 LSLYQLTIEKGTLFYKMHKD-----GDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
           +  Y LT   GTL  K   D      D      + +      +    S++ +  Y +   
Sbjct: 395 IIPYILTPHPGTLIAKKAMDYGLNIWDYNYDHYHESFSYPVYSTQYLSSNQILVYYL--F 452

Query: 257 SFL 259
           + +
Sbjct: 453 AKM 455


>gi|256375581|ref|YP_003099241.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Actinosynnema
           mirum DSM 43827]
 gi|255919884|gb|ACU35395.1| RNA modification enzyme, MiaB family [Actinosynnema mirum DSM
           43827]
          Length = 491

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 73/230 (31%), Gaps = 17/230 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           +  L  + + +  +  ++   +V     C   C +C     V   +  +++  +     +
Sbjct: 130 LDSLETFPSTLPARRDSAYSGWVSVSVGCNNTCTFC----IVPSLRGKEKD--RRPGEVL 183

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L     +     G    S       +     +L        +          +P 
Sbjct: 184 AEVQALVAEGVLEVTLLGQNVNSYGVEFGDRYAFGKLLRACGDVEGLERVRF--TSPHPK 241

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
               +      +     +++ + +QS  ++ L+ + R++     ++ +   R   P   +
Sbjct: 242 DFTDDVIAAMAETPNVCHQLHMPLQSGSDRVLKEMRRSYRTGRYLSILENVRAAMPDAAI 301

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           + D+I   P +T   ++  L             +Q +   GT   ++   
Sbjct: 302 TTDIIVGFPGETEADFQATLDVVREARFSSAFTFQYSKRPGTPAAELPDQ 351


>gi|222054021|ref|YP_002536383.1| MiaB-like tRNA modifying enzyme YliG [Geobacter sp. FRC-32]
 gi|221563310|gb|ACM19282.1| MiaB-like tRNA modifying enzyme YliG [Geobacter sp. FRC-32]
          Length = 451

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 69/196 (35%), Gaps = 10/196 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQ-WMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C YC            +   +   L E +  + +     ++ +    G    L E 
Sbjct: 161 CSNCCSYC---VIPSLRGSFRSRPMDKLLREAKGLVAKGVREINLIAQDITGYGKDLNEG 217

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQS 144
             +  ++  + K   +       + A P  +  +  +  ++       + + +Q + +  
Sbjct: 218 ATLEALIRSLVKLEGLQWIR--LLYAYPDGISDSLIKLIKEEDKVCKYLDIPLQHISDPI 275

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHL 202
           L+ + R  + +E    I   R   P ++     I   P +T   ++  +Q       D +
Sbjct: 276 LKQMNRRSSEAEIRELIAKLRTEVPGIAIRTSFIVGFPGETDDDFKKLVQFVEETRFDRM 335

Query: 203 SLYQLTIEKGTLFYKM 218
            ++  + E+GT  ++M
Sbjct: 336 GVFCYSREEGTPAFEM 351


>gi|466796|gb|AAA17072.1| biotin synthetase [Mycobacterium leprae]
          Length = 345

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 60/202 (29%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I+S +   +   +             G    L
Sbjct: 81  CPEDCHFCSQSGLFMSPVRSAWLD----IRSLVEAAKQTAKSGATEFCIVAAVRGPDERL 136

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
           +            A    + + VEI I  +   + V   +     GV+R +  +++    
Sbjct: 137 MS--------QVAAGIEAIRNEVEINIACSLGMLTVEQVEQLSGIGVHRYNHNLETARSF 188

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 189 FTNVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETVEQRAEFALELAELGPD 243

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 244 EVPLNFLNPRPGTPFGALEVMP 265


>gi|15827620|ref|NP_301883.1| biotin synthase [Mycobacterium leprae TN]
 gi|221230097|ref|YP_002503513.1| biotin synthase [Mycobacterium leprae Br4923]
 gi|13432117|sp|P46715|BIOB_MYCLE RecName: Full=Biotin synthase
 gi|254810736|sp|B8ZR86|BIOB_MYCLB RecName: Full=Biotin synthase
 gi|13093171|emb|CAC31601.1| biotin synthase [Mycobacterium leprae]
 gi|219933204|emb|CAR71315.1| biotin synthase [Mycobacterium leprae Br4923]
          Length = 345

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 60/202 (29%), Gaps = 24/202 (11%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I+S +   +   +             G    L
Sbjct: 81  CPEDCHFCSQSGLFMSPVRSAWLD----IRSLVEAAKQTAKSGATEFCIVAAVRGPDERL 136

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
           +            A    + + VEI I  +   + V   +     GV+R +  +++    
Sbjct: 137 MS--------QVAAGIEAIRNEVEINIACSLGMLTVEQVEQLSGIGVHRYNHNLETARSF 188

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    + + R+    +    I  +  +T+ Q             D
Sbjct: 189 FTNVVT----THTWEERWQTLSMVRDAGMEVCCGGILGM-GETVEQRAEFALELAELGPD 243

Query: 201 HLSLYQLTIEKGTLFYKMHKDG 222
            + L  L    GT F  +    
Sbjct: 244 EVPLNFLNPRPGTPFGALEVMP 265


>gi|320353874|ref|YP_004195213.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122376|gb|ADW17922.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 295

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 73/233 (31%), Gaps = 11/233 (4%)

Query: 29  VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
             +C +C       R K  Q    +    ++ +       ++   +  G      +  + 
Sbjct: 33  HNRCTFCG----AYRDKPFQSKSWEQIEADLAFAAAWCRRQTTLFLADGDVL--ALPHER 86

Query: 89  IALILDGIAKNWTVSSNVEITIEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
           +  +L+ I +       V       N           Y++ G+ R+ LG++S  + +L  
Sbjct: 87  LVALLERIREQLPWIRRVSCYASCQNIEEKTDQQLAHYKRLGLGRLYLGLESGHDPTLAA 146

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK--QTMTQWEMELQRALSYAVDHLSLY 205
           + +  ++   + A    R     +S   +  +    Q+                  +++ 
Sbjct: 147 IAKGVDSEAMVTAGRRIRATGLFLSVTCLLGIAGVTQSQAHARATASVLNRMQPHQIAVL 206

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAH--GLHAYEISNH 256
            L +   T  Y+  + G   +P +           +    H    HA   SN+
Sbjct: 207 TLMLLPNTPLYRQMRAGRFAMPDQEQLFRELRTLLAGLGPHRAQFHANHASNY 259


>gi|288800012|ref|ZP_06405471.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333260|gb|EFC71739.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 431

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 72/198 (36%), Gaps = 12/198 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C ++C YC   +   +++  ++  I + +   + + Q      I    + + G    L  
Sbjct: 146 CNRQCAYCAIPAMTGKHQSRKKEDIINEVK--ELVAQGVKELQIIAQELTYYGVD--LDG 201

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
            + +A +++ IA    V         A P+   +      R+       + + +Q + + 
Sbjct: 202 RRQVAELIEAIADVPGVQWIRLHY--AYPNEFPLELLDVMRRKSNVCKYLDIALQHISDP 259

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            L  + RN +  E +  I   R   P +     L+   P +T   ++  L        + 
Sbjct: 260 VLAKMKRNVSKEETLNLIKKIREAVPGIHLRTTLMVGHPGETKEAFQELLDFVRETRFER 319

Query: 202 LSLYQLTIEKGTLFYKMH 219
           +  +  + E+GT     +
Sbjct: 320 MGAFAYSEEEGTYSACHY 337


>gi|260438638|ref|ZP_05792454.1| radical SAM domain protein [Butyrivibrio crossotus DSM 2876]
 gi|292809232|gb|EFF68437.1| radical SAM domain protein [Butyrivibrio crossotus DSM 2876]
          Length = 569

 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 10/158 (6%)

Query: 108 ITIEANPSSVEVNNFQGY--RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR 165
              E     +E  + +     + G+ ++ +GVQS  + +++ + R  N  +    +   R
Sbjct: 259 FHFEIAADILEEEDIRIMNSLRPGLIQLEIGVQSTNQDTIKAIHRVMNLDKLRNNVAAIR 318

Query: 166 NIFP-RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYK---MHKD 221
                 M  DLI  LP + +  +            D+L L  L +  G+L  +    +  
Sbjct: 319 KCRNIHMHLDLIAGLPYEDINSFRKSFNDIYDMKPDNLQLGFLKLLHGSLMREEKDKYGI 378

Query: 222 GDLVLPSENVAVDLYNLTQSITSAHG----LHAYEISN 255
               +P   V    Y     I         L  Y  SN
Sbjct: 379 VARDIPPYEVLYTKYLSYDDILKLKQVEKVLDMYYNSN 416


>gi|269795611|ref|YP_003315066.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sanguibacter keddieii DSM
           10542]
 gi|269097796|gb|ACZ22232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sanguibacter keddieii DSM
           10542]
          Length = 557

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 12/193 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     V   +  + +  +     +  +  L    ++     G    S     
Sbjct: 185 CNNTCTFC----IVPHLRGKERD--RRPGQVLAEVEALVAQGAVEVTLLGQNVNSYGVEF 238

Query: 88  NIALILDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                   + +       +E       +P++   +      +    + ++ + +QS  ++
Sbjct: 239 GDRGAFAHLLRACGRIDGLERVRFTSPHPAAFTDDVIDAMAETHNVMPQLHMPLQSGSDR 298

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R++ +   +  +   R   P   ++ DLI   P +T   +   L+   +     
Sbjct: 299 VLRAMRRSYRSDRFLGILDRVRAAIPEAAITTDLIVGFPGETEDDFAETLRVVEASRFAS 358

Query: 202 LSLYQLTIEKGTL 214
              +Q +   GT 
Sbjct: 359 AFTFQYSPRPGTP 371


>gi|148654700|ref|YP_001274905.1| MiaB-like tRNA modifying protein YliG [Roseiflexus sp. RS-1]
 gi|238066581|sp|A5UQQ2|RIMO_ROSS1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|148566810|gb|ABQ88955.1| MiaB-like tRNA modifying enzyme YliG [Roseiflexus sp. RS-1]
          Length = 472

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 27/225 (12%)

Query: 28  CVKKCPYC---DF-----NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
           C  +C +C    F     +  V       +    + + E+  + Q             G 
Sbjct: 171 CNLRCAFCTIPSFKGDMRSKAVGAILGEAQELADAGVKEIVLVAQHLTDYGRDLGLKDG- 229

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
                    +AL+LD +             + A P  +         +     + + + +
Sbjct: 230 ---------LALLLDELCAVLP-KDRWVRLMYAYPHGISERLIATMARHPQICHYLDMPL 279

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRAL 195
           Q    ++LR + R  ++      I   R   P ++     I   P +T  ++        
Sbjct: 280 QHAHPETLRRMHRPPDSDRTRRLIADLRAAMPDIALRSTFIIGFPGETSAEFRALTAFLE 339

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
               D + +++ + E GT    +       +P   +    + + +
Sbjct: 340 EVQFDRVGVFRYSREPGTPAAALPD----QIPQRVIERRWHTIMR 380


>gi|288560943|ref|YP_003424429.1| MiaB-like tRNA modifying enzyme [Methanobrevibacter ruminantium M1]
 gi|288543653|gb|ADC47537.1| MiaB-like tRNA modifying enzyme [Methanobrevibacter ruminantium M1]
          Length = 428

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 77/199 (38%), Gaps = 22/199 (11%)

Query: 22  YVHW----PFCVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFF 76
           Y+H       C+  C YC      R +       + S+ + ++    +L        I  
Sbjct: 141 YIHVIQICEGCLGACTYC-CTRFARGH-------LNSYPIKDIVEEARLAIEDGCVEIEL 192

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSSVEVNN---FQGYRKAGV-N 131
                S         + D I +  ++  +  + +   +P ++  +     + ++   V +
Sbjct: 193 TAQDTSAFGKDTGEKLSDLIKEVASLDGDFRVRVGMMHPRNIGNDLDNLIEAFKMEKVYD 252

Query: 132 RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP--RMSFDLIYALPKQTMTQWEM 189
            I L +QS  ++ LR +GRNH   +    ++  +   P   ++ D+I   P +T   +  
Sbjct: 253 FIHLPIQSGSDKVLREMGRNHTVDDYKNIVYSFKQAIPDITIATDIIIGYPTETEEDFMK 312

Query: 190 E--LQRALSYAVDHLSLYQ 206
              L R + + + HLS YQ
Sbjct: 313 TAELIREIKFNLIHLSKYQ 331


>gi|218886497|ref|YP_002435818.1| RNA modification enzyme, MiaB family [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757451|gb|ACL08350.1| RNA modification enzyme, MiaB family [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 462

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 65/200 (32%), Gaps = 11/200 (5%)

Query: 28  CVKKCPYC--DFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C YC         R +  +E   ++    +    +      ++   +G   P    
Sbjct: 160 CSHRCTYCIVPLARGAARSRDPREALAEA-RRLLDAGFRELIVSGVNLRQYGRDLPGG-G 217

Query: 86  PQNIALILDGIAKNWT-VSSNVEITIEA-NPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
           P    L+     +     +    + I +  P  +         ++ +   ++ L +QS  
Sbjct: 218 PDFWDLLAFLERELAPQWAGRARLRISSLEPGQLGERALDVLAESRLVAPQLHLSLQSGS 277

Query: 142 EQSLRFLGRNH-NASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
              LR +GR H      +  +     ++P      D++   P +   ++   L    +  
Sbjct: 278 PGVLRRMGRGHYRPEPLLDFVRELAEVWPLFGLGADILTGFPGEADAEFGETLDFVGALP 337

Query: 199 VDHLSLYQLTIEKGTLFYKM 218
           + +  ++  +   GT    M
Sbjct: 338 LTYAHVFPYSRRPGTPAAVM 357


>gi|118471396|ref|YP_887508.1| biotin synthase [Mycobacterium smegmatis str. MC2 155]
 gi|254810738|sp|A0QX70|BIOB_MYCS2 RecName: Full=Biotin synthase
 gi|118172683|gb|ABK73579.1| biotin synthase [Mycobacterium smegmatis str. MC2 155]
          Length = 353

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 58/198 (29%), Gaps = 24/198 (12%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     + S +   +   +             G     
Sbjct: 89  CPEDCHFCSQSGLFASPVRSAWLD----VPSLVEAAKQTAKTGATEFCIVAAVRG----- 139

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---L 140
              + +  +    A    + + V+I I  +   +     Q     GV+R +  +++    
Sbjct: 140 -PDERL--LAQVAAGIEAIRNEVDIQIACSLGMLTEEQVQRLADMGVHRYNHNLETARSF 196

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
               +      H   E    +++ R     +    I  +  +T+ Q              
Sbjct: 197 FPNVVT----THTWEERWDTLNMVREAGMEVCCGGILGM-GETLEQRAEFAANLAELNPH 251

Query: 201 HLSLYQLTIEKGTLFYKM 218
            + L  L    GT F  +
Sbjct: 252 EVPLNFLNPRPGTPFGDL 269


>gi|78188544|ref|YP_378882.1| hypothetical protein Cag_0566 [Chlorobium chlorochromatii CaD3]
 gi|78170743|gb|ABB27839.1| Protein of unknown function UPF0004 [Chlorobium chlorochromatii
           CaD3]
          Length = 470

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 41/115 (35%), Gaps = 2/115 (1%)

Query: 130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQW 187
           V  + + +Q   +  LR + R +  +   A I  A        +  D++   P +T   +
Sbjct: 260 VPHLHVPLQGGSDSLLRAMRRRYTTAMYRARIERAVERIANCAIGVDIMVGYPSETEEMF 319

Query: 188 EMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
              +    +  + +L ++  ++   TL        +    S ++  +      ++
Sbjct: 320 HESMAFIEALPLSYLHVFSCSLRPHTLLADEVARQERKALSGDIVAERSRQMVAL 374


>gi|148241399|ref|YP_001226556.1| 2-methylthioadenine synthetase [Synechococcus sp. RCC307]
 gi|238066614|sp|A5GQP4|RIMO_SYNR3 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|147849709|emb|CAK27203.1| 2-methylthioadenine synthetase [Synechococcus sp. RCC307]
          Length = 487

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 13/199 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI--SSIFFGGGTPSLIE 85
           C  +C +C      +     +   I+S + E Q +        I  S I    G    ++
Sbjct: 187 CDYRCAFC---IIPKLRGDQRSRPIESIVAEAQQLAAQGVKELILISQITTNYG----LD 239

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + + +     V         A P+ +       YR+    +  + L +Q    +
Sbjct: 240 LYGKPQLAELLRALGEVEIPWIRVHYAYPTGLTPEVLAAYREVPNVLPYLDLPLQHSHPE 299

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R          +   R   P        I   P +T  Q+E  L+       DH
Sbjct: 300 VLRAMNRPWQEGVNGQLLQRIREQLPDAVLRTTFIVGYPGETEEQFEHLLEFVQEQRFDH 359

Query: 202 LSLYQLTIEKGTLFYKMHK 220
           + ++  + E GT    +  
Sbjct: 360 VGVFCFSPEDGTPAADLPN 378


>gi|146302699|ref|YP_001197290.1| radical SAM domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146157117|gb|ABQ07971.1| Radical SAM domain protein [Flavobacterium johnsoniae UW101]
          Length = 738

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 14/169 (8%)

Query: 31  KCPYCDFNSHVRRYKVGQENFIQS--FLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           KC +CD    +    +     + +      M+ + + TG      +      P+L+    
Sbjct: 368 KCTFCD----ISLDYIKVYEPVAASLLCDRMEELIEQTGQNGFHFVDE-AAPPALMRALA 422

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
           + ++   +A  W  +   E        S   +     + +G   +S G++   ++ L+ +
Sbjct: 423 LEILKRKLAVTWWTNIRFEK-------SFSKDLCLLLKASGCIAVSGGLEVASDRLLKLI 475

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
            +     +              +   L+Y  P QT+ +    L+     
Sbjct: 476 DKGVTVEQVAKVTRNFTEAGIMVHAYLMYGYPTQTIQETIDSLEMVRQL 524


>gi|242071517|ref|XP_002451035.1| hypothetical protein SORBIDRAFT_05g023010 [Sorghum bicolor]
 gi|241936878|gb|EES10023.1| hypothetical protein SORBIDRAFT_05g023010 [Sorghum bicolor]
          Length = 601

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 4/146 (2%)

Query: 110 IEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P           R      N I L  Q+     L  + R +     +  +H  RN+
Sbjct: 363 TSPHPKDFPDELLYLMRDRYNICNLIHLPAQTGSTAVLERMRRGYTREAYLELVHKIRNV 422

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P +    D I     +T       L    +   D   ++  ++ + T  ++ ++D    
Sbjct: 423 IPDVGLSSDFITGFCGETEDDHAETLSLVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPE 482

Query: 226 LPSENVAVDLYNLTQSITSAHGLHAY 251
              +   ++L N  +  T  +     
Sbjct: 483 DVKQRRLMELINTFRETTKKNYDSQI 508


>gi|237744465|ref|ZP_04574946.1| biotin synthase [Fusobacterium sp. 7_1]
 gi|229431694|gb|EEO41906.1| biotin synthase [Fusobacterium sp. 7_1]
          Length = 360

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 75/239 (31%), Gaps = 14/239 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C YC  + H +          +          +  G    S +  G G       +
Sbjct: 101 CSENCKYCAQSVHFKTGADVYGLISKELALYEAKKNENEGAHRFSLVTSGRGLNG--NEK 158

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQS---LEEQS 144
            +  +++        +  +E+   A+         Q    AGV      ++S        
Sbjct: 159 ELDKLVEIYKYIGMHTGKLELC--ASHGICTKEALQKLADAGVTTYHHNLESSRRFYPNV 216

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
                 +H   + +  I  A+ +   +    I+ L  +T+           +  +  + +
Sbjct: 217 ----CTSHTYDDRVNTIKNAKAVGLNVCSGGIFGL-GETIEDRIDMALDLRTLDIHSVPI 271

Query: 205 YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAES 263
             LT   GT F   +++ +     + +++  + L +S    +     ++  H+  G   
Sbjct: 272 NVLTPIPGTPFEN-NEEVNPFEILKTISIYRFILPKSFLR-YCGGRIKLGEHARTGLRC 328


>gi|227504866|ref|ZP_03934915.1| possible tRNA 2-methylthioadenine synthetase [Corynebacterium
           striatum ATCC 6940]
 gi|227198557|gb|EEI78605.1| possible tRNA 2-methylthioadenine synthetase [Corynebacterium
           striatum ATCC 6940]
          Length = 537

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +      +      ++ + +QS  ++ L+ + R++ + + +A +   R  
Sbjct: 272 TSPHPAEFTSDVIDAMAETPAVCPQLHMPLQSGSDRILKEMRRSYRSKKFLAILDEVREK 331

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLV 225
            P   ++ D+I   P +T   +E  +             +Q +   GT   +M +     
Sbjct: 332 MPHAAITTDIIVGFPGETEEDFEATMDVVKRARFASAFTFQYSPRPGTPAAEMEQQVPKH 391

Query: 226 LPSENVAV 233
           +  E    
Sbjct: 392 IVQERFER 399


>gi|210134467|ref|YP_002300906.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Helicobacter
           pylori P12]
 gi|229890641|sp|B6JKJ8|MIAB_HELP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|210132435|gb|ACJ07426.1| 2-methylthioadenine synthetase [Helicobacter pylori P12]
          Length = 437

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGVRF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEIPGIERIRF--TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|169831003|ref|YP_001716985.1| MiaB-like tRNA modifying protein YliG [Candidatus Desulforudis
           audaxviator MP104C]
 gi|238065333|sp|B1I310|RIMO_DESAP RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|169637847|gb|ACA59353.1| MiaB-like tRNA modifying enzyme YliG [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 450

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 19/158 (12%)

Query: 112 ANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP 169
             PS +     +   +       + + +Q   ++ LR +GR+  + +    I   R+  P
Sbjct: 242 CYPSGITFELVELMAREPRLCRYLDIPLQHASDRVLRRMGRSTMSYDLRKLILFLRSAIP 301

Query: 170 RMSFD--LIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLP 227
            ++     +   P +T   +E  L    +  +D    +  + E+GT   +M         
Sbjct: 302 GLTIRSTFMVGFPGETEADFEELLGFLKAMKLDRAGFFAYSREEGTPAARMPDQVPP--- 358

Query: 228 SENVAVDLYNLTQSITSAHGLHAYEIS---NHSFLGAE 262
                     + +           E+S   N + +G+E
Sbjct: 359 ---------EVKRERLERAAAVQREVSRALNRARVGSE 387


>gi|54023800|ref|YP_118042.1| biotin synthase [Nocardia farcinica IFM 10152]
 gi|81823169|sp|Q5YYR3|BIOB_NOCFA RecName: Full=Biotin synthase
 gi|54015308|dbj|BAD56678.1| putative biotin synthase [Nocardia farcinica IFM 10152]
          Length = 337

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 60/196 (30%), Gaps = 20/196 (10%)

Query: 28  CVKKCPYCD----FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           C + C +C     F S VR   +     I S +   +   +             G     
Sbjct: 73  CPEDCHFCSQSGLFQSPVRAAWLD----IPSLVEAAKQTAKTGATEFCIVAAVRGPD--- 125

Query: 84  IEPQNIALILDGIAKNWT-VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE 142
                 A ++  +A     + + V+I +  +   +           GV+R +  +++ + 
Sbjct: 126 ------ARLMAQVAAGVEAIRNEVDIQVACSLGMLTQEQVDQLAAMGVHRYNHNLETAKS 179

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
                +   H   E    + + R     +    I  +  +T+ Q      +      D +
Sbjct: 180 HFPNVVT-THTWEERWDTLRMVREAGMEVCCGGILGM-GETLEQRAEFAAQLAELEPDEV 237

Query: 203 SLYQLTIEKGTLFYKM 218
            L  L    GT F  +
Sbjct: 238 PLNFLNPRPGTPFGDL 253


>gi|296117712|ref|ZP_06836296.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969443|gb|EFG82684.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 488

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 79/250 (31%), Gaps = 23/250 (9%)

Query: 4   LSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM 62
           L A+ + +  +  +S   +V     C   C +C     V   +  +E+  +     +  +
Sbjct: 118 LEAFPSVLPAKRESSYAGWVSISVGCNNTCTFC----IVPSLRGKEED--RRPGDILAEV 171

Query: 63  RQLTGPRSISSIFFGGGTPSL---IEPQNIALILDGIAKNWTVSSNVE-----ITIEANP 114
           + L           G    S        ++       +K       +E          +P
Sbjct: 172 QALVDQGVTEVTLLGQNVNSYGVNFADPDLPRDKFAFSKLLRAVGAIEGLERLRFTSPHP 231

Query: 115 SSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR-- 170
           +    +      +      ++ + +QS  ++ L+ + R++   + +  +   R   P   
Sbjct: 232 AEFTSDVIDAMAETPAVCPQLHMPLQSGSDKVLKNMRRSYRTKKFMRIVDEVREKMPHAA 291

Query: 171 MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSEN 230
           ++ D+I   P +T   ++  +             +Q +   GT    M    D  +P   
Sbjct: 292 ITTDIIVGFPGETEEDFQGTMDIVRRARFSAAYTFQYSPRPGTPAATM----DEQVPKHV 347

Query: 231 VAVDLYNLTQ 240
           V      L +
Sbjct: 348 VQERFERLIK 357


>gi|300310058|ref|YP_003774150.1| tRNA modifying 2-methylthioadenine synthetase [Herbaspirillum
           seropedicae SmR1]
 gi|300072843|gb|ADJ62242.1| tRNA modifying 2-methylthioadenine synthetase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 446

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 68/206 (33%), Gaps = 13/206 (6%)

Query: 22  YVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGT 80
           YV     C K C YC       R +     F            Q      +         
Sbjct: 150 YVSIMEGCSKYCSYC--VVPYTRGEEVSRRFEDVLTEVAGLADQGVKEIMLLGQNVNAYR 207

Query: 81  PSLIEP---QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISL 135
             ++E     + AL+++ IA+   +     +T  ++P          Y K     N + L
Sbjct: 208 -GVMEDGEIADFALLIEYIAELPGIERIRFVT--SHPKEFSQRLIDTYAKVPKLCNHLYL 264

Query: 136 GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQR 193
             Q   +++L  + R + A E  + I   R + P ++   D I   P +T   +E  ++ 
Sbjct: 265 PAQHGSDRTLAAMKRGYTALEYKSVIRRMRKVRPDITVQSDFIVGFPGETEEDFEALMKL 324

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYKMH 219
                 D+   +  +   GT    + 
Sbjct: 325 VADVGFDNSFSFIFSARPGTPAANLP 350


>gi|316969966|gb|EFV53984.1| putative radical SAM domain protein [Trichinella spiralis]
          Length = 405

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 50/157 (31%), Gaps = 8/157 (5%)

Query: 91  LILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRF 147
              + + +   ++SNV I     +P           R      N + L  QS     L+ 
Sbjct: 155 RFAELLQRLSNINSNVRIRFTSPHPKDFPDEVLDVIRNHPNICNSVHLPAQSGSNNVLQR 214

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + R +     +  +   ++  P ++   D I     +T    E  +Q   +    +   +
Sbjct: 215 MHRGYTVEAYMNLVEKIKDKIPGVTLTSDFISGFCGETDEDHEQTVQLIKNVQYSYCYTF 274

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
             ++ + T  ++ +      +P +        L    
Sbjct: 275 VYSMRERTKAHRRY---CDDVPIDVKKARSQQLQNEF 308


>gi|296274350|ref|YP_003656981.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Arcobacter nitrofigilis
           DSM 7299]
 gi|296098524|gb|ADG94474.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Arcobacter nitrofigilis
           DSM 7299]
          Length = 439

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 68/235 (28%), Gaps = 19/235 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C K+C YC                 +  + ++Q   +     ++  +  G    S     
Sbjct: 154 CDKECTYC---IVPATRGDEISIPPEMIVQQIQ---KDVDKGAVEVMLLGQNVNSYGRRF 207

Query: 85  EPQ----NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
             +        +L  I+K   +          +P  ++    + +         I + +Q
Sbjct: 208 SDKRAKTTFTKLLQEISKIEGLRRIRF--TSPHPLHMDDEFIEEFSSNPKISKCIHMPLQ 265

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +     +      R + P +    D+I   P +T   +E  +     
Sbjct: 266 SGSTSILKAMKRGYTKEWFLNRAEKIRRLVPNVRITTDIIVGFPGETQEDFEDTMDVIEK 325

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
              D +  ++ +    T    +         +    + + +L +     H     
Sbjct: 326 VKFDQIFNFKYSPRPNTAALALKDQEIDDEIAGARLIKVIDLHKEHLVEHMNSHI 380


>gi|217967713|ref|YP_002353219.1| MiaB-like tRNA modifying enzyme [Dictyoglomus turgidum DSM 6724]
 gi|217336812|gb|ACK42605.1| MiaB-like tRNA modifying enzyme [Dictyoglomus turgidum DSM 6724]
          Length = 417

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 17/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPR----SISSIFFGGGTPSL 83
           C   C YC     +  Y  G+E   + F   M+  ++L         ++ I  G     L
Sbjct: 130 CNNFCTYC-----IVPYLRGRERS-KPFDKVMEEAQKLVENGFKEIVLTGIRLGAYGRDL 183

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
            +   ++ +L  + +   +      +IE  P  +     +             + +QS +
Sbjct: 184 GDKDALSKLLLKLFEMDGLVKIRLSSIE--PMDITEGLIK-LADHPKLCKHWHIPLQSGD 240

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
           ++ L+ + R ++       ++  R   P ++   D+I   P+++   +      A     
Sbjct: 241 DEILKKMNRRYDTKYFEQIVYKLREKVPDVAITTDIIVGYPEESEENFNNTYLFAERMGF 300

Query: 200 DHLSLYQLTIEKGTLFYKM 218
             + ++  +    T  YK+
Sbjct: 301 MRIHVFPYSPRPFTPAYKL 319


>gi|208434215|ref|YP_002265881.1| conserved hypothetical ATP-binding protein [Helicobacter pylori
           G27]
 gi|229890642|sp|B5ZA35|MIAB_HELPG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|208432144|gb|ACI27015.1| conserved hypothetical ATP-binding protein [Helicobacter pylori
           G27]
          Length = 437

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 19/197 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI--QSFLTEMQWMRQLTGPRSI----SSIFFGGGTP 81
           C KKC YC     +  +  G+E  I     L E + +    G + +     ++   G   
Sbjct: 148 CDKKCAYC-----IVPHTRGKEISIPMDLILKEAEKLAN-NGTKELMLLGQNVNNYGARF 201

Query: 82  SLIEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
           S    + + + +LD +++   +          +P  +     + + K       I + +Q
Sbjct: 202 SSEHAKVDFSDLLDKLSEISGIERIRF--TSPHPLHMNDGFLERFAKNPKVCKSIHMPLQ 259

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++    
Sbjct: 260 SGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEK 319

Query: 197 YAVDHLSLYQLTIEKGT 213
              D L  +  +    T
Sbjct: 320 VRFDTLYSFIYSPRPFT 336


>gi|297379491|gb|ADI34378.1| RNA modification enzyme, MiaB family [Helicobacter pylori v225d]
          Length = 437

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 66/195 (33%), Gaps = 15/195 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI----SSIFFGGGTPSL 83
           C KKC YC     V   +  + +     + +        G + +     ++   G   S 
Sbjct: 148 CDKKCAYC----IVPHTRGKEISIPMDLILKEAEKLASNGTKELMLLGQNVNNYGTRFSS 203

Query: 84  IEPQ-NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
              + + + +LD + +   +          +P  +     + + K       I + +QS 
Sbjct: 204 EHAKVDFSDLLDKLGEIQGIERIRF--TSPHPLHMSDAFLERFAKNPKVCKSIHMPLQSG 261

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
               L+ + R ++    +  +   + + P +    D+I   P ++   +E  ++      
Sbjct: 262 SSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVR 321

Query: 199 VDHLSLYQLTIEKGT 213
            D L  +  +    T
Sbjct: 322 FDTLYSFIYSPRPFT 336


>gi|269929314|ref|YP_003321635.1| Radical SAM domain-containing protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269788671|gb|ACZ40813.1| Radical SAM domain protein [Sphaerobacter thermophilus DSM 20745]
          Length = 519

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 13/195 (6%)

Query: 32  CPY-CDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-FGGGTPSLIE--PQ 87
           CP+ C++ +     +       ++   E++W+R    P  I  +    G  P  ++    
Sbjct: 218 CPFHCNWCAKPIWGQRYNARSPENVAAELKWLRDNYQPDHIWFVDDIMGLKPGWLQRYAD 277

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            +  +           S   + +     +      +   +AG   + +G +S  ++ L  
Sbjct: 278 EVERL----GVRTPFKSLHRVDLLLRGDT-----IEALARAGAQIVWVGAESGSQRILDA 328

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           + +     + +           ++ F L +  P +T    E+ LQ       D + +   
Sbjct: 329 MEKGTKVEQIVEVARRLHAAGIQVGFFLQFGYPGETRADIELTLQMVRDCQPDDIGVSVA 388

Query: 208 TIEKGTLFYKMHKDG 222
               GT F++  KD 
Sbjct: 389 YPLPGTPFHERVKDQ 403


>gi|288573909|ref|ZP_06392266.1| Radical SAM domain protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569650|gb|EFC91207.1| Radical SAM domain protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 328

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 63/195 (32%), Gaps = 16/195 (8%)

Query: 28  CVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C + C YC     N  VRRY + +E  + S          L     I +    GG     
Sbjct: 38  CRQNCLYCGLRRDNRRVRRYSLDEEEILASV--------DLGYQTGIRTFVLQGGEDPAW 89

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
               +   ++ I          E  +  +   +E  +++    AG +R  L  ++ + + 
Sbjct: 90  SASRLCRTVEVIKGRAP-----EAAVTLSCGIMEREDYRALASAGTDRYLLRFETCDGEL 144

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
            R L    + SE + A+   R     +    +  LP +T    +  L       +D + +
Sbjct: 145 HRRLRDGVSLSERLKALIDLREAGIELGSGFMVGLPGETEKISQGNLALCRDLDLDMVGI 204

Query: 205 YQLTIEKGTLFYKMH 219
                   T      
Sbjct: 205 GPFIANPETPLAHCP 219


>gi|242278004|ref|YP_002990133.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242120898|gb|ACS78594.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 464

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 71/214 (33%), Gaps = 15/214 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC +  H+  +K+     +     E++ +          +        S+   +
Sbjct: 190 CEHCCSYCTYP-HLEGHKMRVRP-VNEIADELEMLCNCGADNIFFTD-------SVFNDR 240

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +     +       +       P  +E +     +++G+  + +G  +  + +L+ 
Sbjct: 241 AGHYL-QMAEEIIRREIKISWCGFFQPGPIEQDELALLKRSGLQAMEVGTDAASDTTLKG 299

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
           L ++    E +             +  +I+  P +TM      +    S    +  ++  
Sbjct: 300 LRKSFTFDEVMEFNEKCVQQHIPCAHFVIFGGPDETMDTVREGIDNINSLR--NCVVFPF 357

Query: 208 T---IEKGTLFYKMHKDGDLVLPSENVAVDLYNL 238
           +   + +GT  +       L+ P++++    Y  
Sbjct: 358 SGIRLHEGTPLFTRAVKEGLIRPNQSLLEPFYYF 391


>gi|163814151|ref|ZP_02205543.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
 gi|158450600|gb|EDP27595.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
          Length = 437

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 73/235 (31%), Gaps = 31/235 (13%)

Query: 28  CVKKCPYCDFNSHV-----RRYKVGQENFIQSFLT----EMQWMRQLTGPRSISSIFFGG 78
           C K C YC     +     R   +  +  + S        ++ +  +    ++  +   G
Sbjct: 150 CNKLCTYC----IIPHIRGRYRSIPMDRLLASAEKLAADGIKELVLVAQETTLYGVDLYG 205

Query: 79  GTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLG 136
           G       + +  +L  ++    +       +   P  +         +     + I + 
Sbjct: 206 G-------KKLPELLTKLSDIEGIEWIR--LLYCYPEEITDELISVMAENPKICHYIDIP 256

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
           +Q  E + LR +GR  +  + ++ +   R   P ++    LI   P +T    +  +   
Sbjct: 257 IQHSENEILRRMGRKTSREDIVSLVSKLRTAMPDIAIRTTLISGFPGETQELHDGLVDFV 316

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH 249
                D L ++  + E+GT         D       +A    +    +       
Sbjct: 317 DECEFDRLGVFTYSPEEGTPAAGYEDQVD-----GELAAKWRDEIMELQQEISYE 366


>gi|227539201|ref|ZP_03969250.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227240883|gb|EEI90898.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 444

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                ++  + E +++        I     + + G     +
Sbjct: 158 CNRPCSFCA---IPLMRGKHVSKSMEDLVKEAKFLASNGTKELILIAQDLTYYG-----L 209

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           +      + D +     V     I ++ A PS   ++      +     N + + +Q + 
Sbjct: 210 DIYGKRNLSDLLRNLSDVDGIEWIRLQYAYPSGFPMDILDAMAERSNICNYLDMPLQHIS 269

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAV 199
           +  L+ + R     + I  ++  R+  P ++    LI   P +T   ++  L+       
Sbjct: 270 DNMLKSMRRGTTKQKQIDLVNQIRDKVPDIALRTTLICGYPGETEQDFQEMLEWVEDSRF 329

Query: 200 DHLSLYQLTIEKGTLFYKM 218
           D L  +  + E+ T  Y +
Sbjct: 330 DRLGCFTYSHEEKTHAYSL 348


>gi|47227354|emb|CAF96903.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 522

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 29/217 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ------------LTGPRSISSIF 75
           C   C YC            +   ++S L E+  +              +   R  S   
Sbjct: 214 CDNMCTYC---IVPFTRGRERSRPVRSILEEVSQLSDQGVKEVTLLGQNVNSYRDTSHEQ 270

Query: 76  FGGGTPSLIE---------PQNIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGY 125
           FGG   + +           Q      D + +   +  ++ I     +P        Q  
Sbjct: 271 FGGTELTQLSRGFQTVYRTKQGGLRFSDLLDQVSRIDPDMRIRFTSPHPKDFPDEVLQLI 330

Query: 126 --RKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPK 181
             RK    +I L  QS   + L+ + R +     +  +   + I P +S   D I     
Sbjct: 331 AERKNICQQIHLPAQSGSSKILKAMRRGYTREAYLDLVKNIKKIIPGVSLSSDFISGFCG 390

Query: 182 QTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
           +     +  L        +   L+  ++ K T  +  
Sbjct: 391 EKEEDHQQTLSLIREVGYNVGFLFAYSMRKKTQAFHR 427


>gi|257065237|ref|YP_003144909.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256792890|gb|ACV23560.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 308

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 77/229 (33%), Gaps = 21/229 (9%)

Query: 32  CPYCD-FNSHVRRYKVGQENFIQSFLTEMQWMRQLTG-----------PRSISSIFFGGG 79
           C +C  F++   R    +E  ++ FL   +   +  G              +  ++F G 
Sbjct: 30  CTFCSMFHNIPFRMLPLEE--VEDFLARTKAAAETAGLGVGYRSRGINCERVKRVYFVGA 87

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV---NNFQGYRKAGVNRISLG 136
            P  +    +   +D   +   + +    T+ A   ++E     + +  + AGVN + +G
Sbjct: 88  DPFALPAHRLLERIDLAKRY--LPNATVFTMYARTDNIERKSDEDLRALKDAGVNDLYIG 145

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL--PKQTMTQWEMELQRA 194
           V++  +  L +  + ++A + +           R    L+       + +       Q  
Sbjct: 146 VETGLDDVLSYYDKGYSAQQTLEQCERLGRAGIRHCDLLMLGAAGRGRGIENARATAQLE 205

Query: 195 LSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSIT 243
            +     + +  LT  +GT      + G   L  E   +       S  
Sbjct: 206 NASKPHKILMTTLTAYEGTKLNDDIERGAFELADETETLQEEKELISCL 254


>gi|242021866|ref|XP_002431364.1| radical sam protein, putative [Pediculus humanus corporis]
 gi|212516632|gb|EEB18626.1| radical sam protein, putative [Pediculus humanus corporis]
          Length = 442

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 87/257 (33%), Gaps = 25/257 (9%)

Query: 25  WP---FCVKKCPYCDFNSHVRRY--KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGG 79
            P    C+ +C YC    H R        E  ++                S  +  +G  
Sbjct: 199 IPISTGCLNQCTYCK-TKHARGELGSYPVEEIVERAKQAFSEGVVELWLTSEDTGAYGKD 257

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRIS 134
             + + P+ +  +++ I  N  +   +      NP  + + + +   K        + + 
Sbjct: 258 IGASL-PELLWKVVEVIPDNCRMRVGM-----TNPPYI-LEHLEEMAKILNHEKVYSFLH 310

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQ 192
           + VQS  +  L  + R +  S+    +   R   P ++   D+I   P +T   +E  L 
Sbjct: 311 VPVQSGSDAVLSDMKREYTISDFKHVVDFLRLRVPGITIATDIICGFPTETEKDFEETLS 370

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYE 252
              +Y    L + Q     GT   KM K     +P   V      L     +++     +
Sbjct: 371 LCETYKFPSLFINQFYPRPGTPAAKMVK-----VPMHEVKQRTKKLADLFHNSNKKDNKD 425

Query: 253 ISNHSFLGAESLHNLNY 269
              ++    ++  N+ Y
Sbjct: 426 RKFYTVKTKQNKINIKY 442


>gi|89895596|ref|YP_519083.1| hypothetical protein DSY2850 [Desulfitobacterium hafniense Y51]
 gi|89335044|dbj|BAE84639.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 461

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 15/193 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC        +   +   +   + ++       G        F        +P 
Sbjct: 180 CPHNCSYCSLKKI--YHNEFRTRPVDEVIKDI-------GSMPNKYFVFWDDNF-FADPV 229

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L  +A+     +             +       + AG   + LG++S  EQ LR 
Sbjct: 230 YTKALLKDLARLNKRWAAQVTACSCE----DEELLSLAKAAGCLYLFLGLESFSEQGLRD 285

Query: 148 LGRNHN-ASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
             +N N   E    ++        +   +++     T+  +E  L+   +  VD ++   
Sbjct: 286 ANKNFNKIEEYGKVVNKLHRHGISIQAGIVFGFDSDTLEVFETTLKACNNIGVDGVTASI 345

Query: 207 LTIEKGTLFYKMH 219
           LT   GT  Y+ +
Sbjct: 346 LTPFPGTSIYEQY 358


>gi|325265156|ref|ZP_08131882.1| radical SAM domain protein [Clostridium sp. D5]
 gi|324029560|gb|EGB90849.1| radical SAM domain protein [Clostridium sp. D5]
          Length = 352

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 17/194 (8%)

Query: 27  FCVKKCPYCDF---NSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL 83
           +C   C YC     N+   RY++ +E  ++                   +    GG    
Sbjct: 61  YCRNDCYYCGIRRSNTSAHRYRLDKEAILECCTK--------GYGLGFRTFVLQGGEDGH 112

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + +  I+  I +++      +  I  +       ++Q    AG +R  L  ++ +  
Sbjct: 113 YTDEIMVDIVQSIREHFP-----DCAITLSIGERTRESYQRLYDAGADRYLLRHETCDAD 167

Query: 144 SLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
             + L      A+     +   + I  +     +   P Q       ++          +
Sbjct: 168 HYQKLHPESLTAAHRQQCLWDLKEIGYQTGTGFMVGSPFQAPENLADDMLFLKKLNPQMV 227

Query: 203 SLYQLTIEKGTLFY 216
            +        T F 
Sbjct: 228 GIGPFIPHHETPFA 241


>gi|311893700|dbj|BAJ26108.1| hypothetical protein KSE_02600 [Kitasatospora setae KM-6054]
          Length = 631

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 64/175 (36%), Gaps = 25/175 (14%)

Query: 29  VKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
              C +C  N S +       E+F++  L   +  R                   L++ Q
Sbjct: 281 KHHCTFCGLNGSAMAYRSKRPEDFLEEILALTERHR-------------------LLDIQ 321

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPS-----SVEVNNFQGYRKAGVNRISLGVQSLEE 142
            +  ILD       +     + ++         ++    FQ    AG  ++  G++SL  
Sbjct: 322 VVDNILDMGYFETVLRPLAALPVDLRLHFEIKANLRREQFQLLGDAGAVQVQPGIESLSS 381

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSY 197
           + L+ + +     + + A+  A++    ++++ +Y  P +    +   L+R  + 
Sbjct: 382 RILKLMDKGVTGCQNVRALRDAQSAGVSVAWNHLYGFPGEHPDDYREILRRLPAL 436


>gi|289550653|ref|YP_003471557.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
 gi|289180185|gb|ADC87430.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
          Length = 448

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 73/233 (31%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPKKVVEQATTLVNAGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +         K+   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETIDGLERIRISSIEAS--QLTDEVIDVIEKSNKVVRHLHIPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +        +         ++   D+I   P +T  +++        +    L 
Sbjct: 268 KRMRRKYTMEHFSERLSKLHKALSDLAVTSDVIVGFPGETDEEFQETFDFIAKHKFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 328 VFPYSSRIGTPAARMDNQIDEDVKNERVHKLIALSDQLAKEYASKFEDDVLEV 380


>gi|261749373|ref|YP_003257058.1| putative 2-methylthioadenine synthetase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497465|gb|ACX83915.1| putative 2-methylthioadenine synthetase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 444

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 27/203 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF--------FGGG 79
           C  KC YC            +   I++ L  ++++ +      + +            G 
Sbjct: 152 CDYKCSYC---IIPISRGFSRSESIENILKNIRFLFKKGIKEIVLTGINIGDYGKKIYGN 208

Query: 80  TP----SLIE-PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK--AGVNR 132
            P    +  +  Q I  I +       +SS         P+ ++    +   K    +  
Sbjct: 209 HPGRSYTFFDLIQAIDQIKEEGRGRIRLSS-------IEPNLLKEKCIEFLSKSRLFMPH 261

Query: 133 ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEME 190
             + +QS     L  + R +        +   RN+ P   +  D+I   P +T   +   
Sbjct: 262 FHIPLQSGSNYILGKMQRRYRRELYQEKVQYIRNLIPDAYIGSDIIVGFPGETHEHFLET 321

Query: 191 LQRALSYAVDHLSLYQLTIEKGT 213
                   +  L ++  +    T
Sbjct: 322 YHFLKKLEISFLHIFPYSQRPNT 344


>gi|258541612|ref|YP_003187045.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256632690|dbj|BAH98665.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635747|dbj|BAI01716.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638802|dbj|BAI04764.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641856|dbj|BAI07811.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644911|dbj|BAI10859.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647966|dbj|BAI13907.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651019|dbj|BAI16953.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654010|dbj|BAI19937.1| radical S-adenosylmethionine (SAM) protein [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 447

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 27/219 (12%)

Query: 32  CPY-CDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQN 88
           CP+ CDF S  R Y  G+  +  +   + E++ ++            FGG          
Sbjct: 179 CPFVCDFCSE-RFYLGGRYRWRPVDEMVNELKLIKNRGSHFFFGESNFGGKK-------- 229

Query: 89  IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFL 148
            +  ++ +     +         +N   ++       RK+GV  +++G++S+++  L  +
Sbjct: 230 -SRAMELMEGLVPLGIRWSTLWSSNLC-LDKEFLDLARKSGVMHVNIGIESIDKDILDGM 287

Query: 149 G-------RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH 201
                   R H            R      S + I+    +    +   +     + V  
Sbjct: 288 RKGWNKASRYH------EMFENLRQRDISYSLNFIFGFDDEDHDIYRATISFLEEHKVPA 341

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
                LT  KGT  +   +    ++ +  +      + Q
Sbjct: 342 AYFNILTPTKGTALFNRMEKAGRIINAPEIDRWPGQICQ 380


>gi|237750753|ref|ZP_04581233.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229373843|gb|EEO24234.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 412

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 62/192 (32%), Gaps = 9/192 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +   +    +F ++ +  +  ++ L        I  G    S     
Sbjct: 124 CNFACSYC----IIPSVRGSARSFSEAHI--LDQIKILEQSGVTEVILTGTNIGSY-GLD 176

Query: 88  NIALILDGIAKNWTVSSNVEITI-EANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
               I   I K   +S  + I +    PS ++    +      + R + + +Q   E  L
Sbjct: 177 TKTHIATLIQKIHDISGILRIRLGSLEPSQIDSAFLEILELNKLERHLHIALQHTSESML 236

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           + + R +     +   +   +    +  D I     +T   ++  +       + H+  +
Sbjct: 237 KIMNRKNTFERDLELFNAIASKGFSLGTDYIIGHYGETKEIFDEAICNLEKLPLTHIHPF 296

Query: 206 QLTIEKGTLFYK 217
             +   GT   K
Sbjct: 297 IYSPRFGTKSAK 308


>gi|255037356|ref|YP_003087977.1| MiaB-like tRNA modifying enzyme YliG [Dyadobacter fermentans DSM
           18053]
 gi|254950112|gb|ACT94812.1| MiaB-like tRNA modifying enzyme YliG [Dyadobacter fermentans DSM
           18053]
          Length = 436

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 79/242 (32%), Gaps = 25/242 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C + C +C                I+  + E + + +      I     + + G     +
Sbjct: 151 CDRPCSFCA---IPLMRGGHVSRSIEDLVKEAKSLAKRGTKELILIAQDLTYYG-----L 202

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGY--RKAGVNRISLGVQSLE 141
           +      + D +     V     I ++ A P+   ++       R      + + +QS  
Sbjct: 203 DIYKKRNLSDLLRNLSDVEGIEWIRLQYAYPAGFPMDVLDVMNERSNIAKYLDMPLQSGS 262

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L+ + R     +  A IH  R+  P ++    LI   P +T   ++   +       
Sbjct: 263 TEMLKLMRRGITREKTEALIHSIRDKVPDIALRTTLIVGHPGETEELFDETYEFVEKMRF 322

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D L  +Q + E  T  + M  D +        A        +I       + E+ N + +
Sbjct: 323 DRLGAFQYSHEDNTHSFSMEDDVE--------AEVKQERADAIMELQQGISAEL-NQAKI 373

Query: 260 GA 261
           G 
Sbjct: 374 GK 375


>gi|198283886|ref|YP_002220207.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667794|ref|YP_002426521.1| radical SAM domain protein [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248407|gb|ACH84000.1| hopanoid biosynthesis associated radical SAM protein HpnJ
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218520007|gb|ACK80593.1| radical SAM domain protein [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 476

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 72/232 (31%), Gaps = 17/232 (7%)

Query: 28  CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C  +C +C +   V   RY+      +   +  +Q               F    P    
Sbjct: 209 CRSQCTFCLWPQTVGGHRYRTRSAASVIEEVRYIQKNFPQVKEIFFDDDTFTDDRP---R 265

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
            + IA  L  +   W+ ++   +  +           +   + G+  + +G +S ++Q L
Sbjct: 266 AEEIARGLGKLGVTWSCNAKANVPYDT---------LKVLHENGLRLLLVGYESGDQQIL 316

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
             + +      A         +   +    I  LP +T    +  +  A       + + 
Sbjct: 317 NNIKKGLKVEAARKFTADCHKLGIVIHGTFILGLPGETKETIQKTIDFAKEINPHTIQVS 376

Query: 206 QLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSI--TSAHGLHAYEISN 255
                 GT  Y      +  L  E+ A  + +    I   S   L+  EI +
Sbjct: 377 LAAPYPGTFLYNQ-AKQEGWLTDEDEAHLVNDRGVQISPMSYPHLNHTEIFD 427


>gi|296133827|ref|YP_003641074.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296032405|gb|ADG83173.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 445

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 66/172 (38%), Gaps = 8/172 (4%)

Query: 28  CVKKCPYCD---FNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI 84
           C  +C +C    F S     K G +  ++S    M+ +  L     + +I F        
Sbjct: 193 CYGRCSFCSVIPFYS-----KFGPKYRLRSSENVMEEIDVLYNEYGVRNIEFNDANFVGG 247

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +        +   +    + ++ ++I+  P  V+   F   ++AG++++ LGV+S  +  
Sbjct: 248 KGHGFHRAREIAEEILKRNLDLRLSIQCRPDDVDEELFAILKRAGLSKVFLGVESGSQTM 307

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALS 196
           L    ++    E I A+ +   +   +    I    + T+ ++   +     
Sbjct: 308 LDRFKKDITVEENIKALEILGRLDFIVIMGFITFDDRITIREFRENMAFIKK 359


>gi|317152134|ref|YP_004120182.1| cobalamin B12-binding domain-containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942385|gb|ADU61436.1| cobalamin B12-binding domain protein [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 498

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 17/194 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S+++R  + +     S +  +   ++L      + I     +P     +
Sbjct: 206 CPFHCRFC---SNIKRRYIKK-----SVVNILGEAKELVKFYEKNDISIYFQSPIFRMEK 257

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +L        +    +   +    ++  ++     +AG   I LG +S   + L  
Sbjct: 258 EEIELLKAERNREGL--CFKWRAQTRVDTLSPDDIPLLVEAGAAVIDLGFESGAPEILLA 315

Query: 148 LGRNHNAS----EAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA--VDH 201
           + +         +A   +  A      +  ++++    +  T          S    +  
Sbjct: 316 MKKTKTPESYLNDAKQILLAAHQAGLIIKLNILF-YAGERDTTLLETFDFLSSSERYLHS 374

Query: 202 LSLYQLTIEKGTLF 215
           +S Y L +  GT  
Sbjct: 375 ISAYPLLVCPGTQL 388


>gi|282890695|ref|ZP_06299215.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499288|gb|EFB41587.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 430

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 71/235 (30%), Gaps = 27/235 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGP-------RSISSIFFGGGT 80
           C + C YC     +  Y  G+    ++    +  ++ L            I+   F G  
Sbjct: 144 CNEFCTYC-----IIPYVRGRSRS-RTIPEIIDEVKDLISNGFKEIVLTGINIGDFDGNP 197

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV--Q 138
              + P  +  ++  + +   +          +P  ++               S+ +  Q
Sbjct: 198 VEGMPPHRLVDLVRAVDQVPGLKRLR--ISSIDPDEIDDELADAVLNGAKTCHSMHIVLQ 255

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S     L+ + R +     +  I   R   P  +F  D+I   P +T T +   ++    
Sbjct: 256 SGSNVVLKRMNRKYTRQIFLNTIDRLRQADPNFTFTTDIIVGFPGETETDFAETMEIMQE 315

Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
                + ++  +  K T    M       +  +          Q +  +    AY
Sbjct: 316 VQFAKVHMFPYSERKRTRAALMPNKVPPDVIKKRK--------QELLRSAEHQAY 362


>gi|269217364|ref|ZP_06161218.1| hypothetical protein HMPREF0762_02065 [Slackia exigua ATCC 700122]
 gi|269129501|gb|EEZ60586.1| hypothetical protein HMPREF0762_02065 [Slackia exigua ATCC 700122]
          Length = 222

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 74/223 (33%), Gaps = 24/223 (10%)

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
           +  Q +A I   I + + V+S+  +T+ A  S++    F  +++AGV R  + + +L + 
Sbjct: 1   MAGQALADISAAIHRVFDVASDASVTMSAAVSNISGATFPFFKRAGVQRFDMEMMALFQP 60

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPR------MSFDLIYALPKQTMTQWEMELQRALSY 197
                       +A     +A + F        +   L   +   ++  +      A   
Sbjct: 61  IFSRCNNV----DAFDFFVIACDSFLHAYANDTLGLVLACGVGGVSIQDFRRSCLAAAGS 116

Query: 198 AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHS 257
              H+S   L  +KG             LPS +         + +  A G         +
Sbjct: 117 DAVHVSF--LKADKG------------DLPSPDETAAQEAQAREVLGAAGFVECLPMRFA 162

Query: 258 FLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKH 300
             G E     +Y    D +  G GA +R            + +
Sbjct: 163 RPGHEDRFLASYAAGADVLAFGLGAETRFGGIVSTNTSDFDTY 205


>gi|332297314|ref|YP_004439236.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
 gi|332180417|gb|AEE16105.1| Radical SAM domain protein [Treponema brennaborense DSM 12168]
          Length = 358

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 21/197 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC     +R      E +  +    +   R+        +    GG      P+
Sbjct: 65  CRNDCLYCG----IRYGNDTVERYRLTDAQILDSCRR-GYALGFRTFVLQGGEDEAFHPE 119

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I+ ++  I          +  +  +        +  ++++G +R  L  +S       F
Sbjct: 120 RISRLIRTIKTAHP-----DCALTLSLGEYPKEVYAEWKRSGADRYLLRHESANPTHYAF 174

Query: 148 L---------GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
           L         GR   A+     ++  +++  +     +   PKQT      +++      
Sbjct: 175 LHGAPRDVRNGR--TAAYRQQCLYNLKSLGYQTGAGFMVGTPKQTPAHLAEDMRFLEDLQ 232

Query: 199 VDHLSLYQLTIEKGTLF 215
              + +        T  
Sbjct: 233 PHMIGIGPFIPHPHTPL 249


>gi|300871621|ref|YP_003786494.1| putative biotin synthase [Brachyspira pilosicoli 95/1000]
 gi|300689322|gb|ADK31993.1| putative biotin synthase [Brachyspira pilosicoli 95/1000]
          Length = 373

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 17/195 (8%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFF---GGGTPSL 83
           +C   C YC     +R+     E +    L++   +        I    F   GG  P  
Sbjct: 85  YCKNDCIYCG----IRKSNKNSERYR---LSKEDILSCCDIGYEIGFRTFVLQGGEDP-Y 136

Query: 84  IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQ 143
              + ++ I+D I   +  S      +  +    E   ++  ++ G +R  L  ++ +  
Sbjct: 137 YSLERMSDIVDAIKTKFPDS-----ALTLSIGEKEKKYYKVLKEKGADRFLLRHETADNI 191

Query: 144 SLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL 202
               L  +N +       +   + +  +    ++   P QT+     +L        + +
Sbjct: 192 HYSKLHPKNMSLDNRKECLRTLKKLGYQTGTGIMVGSPYQTLENIADDLMFMQEINPEMI 251

Query: 203 SLYQLTIEKGTLFYK 217
            +      K T F K
Sbjct: 252 GIGPFLPHKDTPFAK 266


>gi|326791735|ref|YP_004309556.1| radical SAM protein [Clostridium lentocellum DSM 5427]
 gi|326542499|gb|ADZ84358.1| Radical SAM domain protein [Clostridium lentocellum DSM 5427]
          Length = 347

 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 11/190 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C + C YC     +RR       +  +    +    ++       +    GG     + 
Sbjct: 62  YCKQDCYYCG----IRRSNTEAARYRLTLEDILSCT-EIGYHLGFRTFVLQGGEDGHFQD 116

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             I  IL  I             I  +       +++ + KAG +R  L  ++       
Sbjct: 117 DTICDILTAIKSQHP-----NCAITLSIGEKSRLSYERFFKAGADRYLLRHETANLAHYS 171

Query: 147 FLGRN-HNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     +  +    ++  + I  ++    +   P QT      +L     +    + + 
Sbjct: 172 QLHPASQSLEQRKQCLYDLKAIGYQVGTGFMVGSPYQTFDTLCEDLLFIQDFKPHMVGIG 231

Query: 206 QLTIEKGTLF 215
                + T F
Sbjct: 232 PFIPHQATPF 241


>gi|41055309|ref|NP_956921.1| CDK5 regulatory subunit-associated protein 1-like 1 [Danio rerio]
 gi|82187245|sp|Q6PG34|CDKAL_DANRE RecName: Full=CDK5 regulatory subunit-associated protein 1-like 1
 gi|34784048|gb|AAH57248.1| CDK5 regulatory subunit associated protein 1-like 1 [Danio rerio]
          Length = 547

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 77/244 (31%), Gaps = 29/244 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKV--GQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC    H R        E  ++      Q         S  +  +G    S + 
Sbjct: 209 CLNACTYCK-TKHARGDLASYPVEELVERVRQSFQEGVCEIWLTSEDTGAYGRDIGSDL- 266

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG-----VNRISLGVQSL 140
           P  +  +++       +     + +        + + +   +        + + + +QS 
Sbjct: 267 PTLLWRLVEE------IPEGAMLRLGMTNPPYILEHLEEMSRILQHPRVFSFLHVPLQSA 320

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
            +  L  + R +  ++    +   +   P ++   D+I   P +T   +E  L     Y 
Sbjct: 321 SDSVLMEMRREYCCADFTHLVDYLKERVPGITIATDIICGFPGETDEDFEQTLALVRRYR 380

Query: 199 VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSF 258
              L + Q     GT    M +     LP+         L      +   H+Y   +H  
Sbjct: 381 FPSLFINQFYPRPGTPAALMQQ-----LPAHVKKQRTKEL------SALFHSYRPYDH-K 428

Query: 259 LGAE 262
           +G +
Sbjct: 429 MGEQ 432


>gi|71661088|ref|XP_817570.1| tRNA modification enzyme [Trypanosoma cruzi strain CL Brener]
 gi|70882770|gb|EAN95719.1| tRNA modification enzyme, putative [Trypanosoma cruzi]
          Length = 530

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 80/235 (34%), Gaps = 18/235 (7%)

Query: 25  WP---FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWM-RQLTGPRSISSIFFGGGT 80
            P    C+  C YC      +     +   I+S +  ++ + ++      I+S   G   
Sbjct: 196 IPISVGCLNHCTYC---KTKQARGDLRSWPIESIVLRVRSVLKEGVKEIRITSEDVGAYG 252

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAG--VNRISLGV 137
              I    I L+   + +       + + +   P  +  +++F    +       + + +
Sbjct: 253 -IDINTDIICLLRAIVKEIQGTEVMMRVGMSNPPYLLRHLDDFAALLRHPNVYEFVHIPI 311

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           QS   + L  + R +   E    +H  R++ P ++   D+I A P +   +W   ++   
Sbjct: 312 QSGSNRILNAMQREYTLEEFYECVHRIRSVVPNVTLATDIICAFPGEGEAEWRETMELC- 370

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA 250
               DH+    L I +              +P++        LT    S   L  
Sbjct: 371 ----DHVRFPVLNITRFYPRRNTPAASMKQIPTDVAKRRTSELTAFFNSYRTLDH 421


>gi|304436321|ref|ZP_07396298.1| MiaB family RNA modification enzyme [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304370676|gb|EFM24324.1| MiaB family RNA modification enzyme [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 442

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 27/230 (11%)

Query: 28  CVKKCPYC-------DFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGG 79
           C  +C +C        F S      V +   + +  + E+  + Q +    +        
Sbjct: 154 CDHRCAFCAIPLIRGSFRSRPMEDIVAEGRELAAAGVRELVLIAQDSANYGLDCYQ-KPM 212

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
            P+L+  + +A I                 + + P        + +      V  + L +
Sbjct: 213 LPTLL--RELAKIDGIAWIR---------VLYSYPKYFTDELIEVFATEPKVVKYVDLPL 261

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q   +  LR + R    +     I   R   P ++     I   P +T  Q++   +   
Sbjct: 262 QHAHDAVLRSMNRPDTRAGMEELIAKLRARIPGVAIRSTFIVGFPGETDAQYQTLRRFVE 321

Query: 196 SYAVDHLSLYQLTIEKGT---LFYKMHKDGDLVLPSENVAVDLYNLTQSI 242
               D + ++  + E+ T      K   +  +     ++      +++ I
Sbjct: 322 KQRFDKVGIFTYSEEEDTAAAAMGKKVSEEVMQERYHDLMSLQSKISEEI 371


>gi|269122389|ref|YP_003310566.1| RNA modification enzyme, MiaB family [Sebaldella termitidis ATCC
           33386]
 gi|268616267|gb|ACZ10635.1| RNA modification enzyme, MiaB family [Sebaldella termitidis ATCC
           33386]
          Length = 445

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 17/196 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C     +  Y  G E  +      +  ++Q         +F G    S    +
Sbjct: 163 CNNYCTFC-----IVPYVRGMERSVP-MREILDDVKQYADKGYKEILFLGQNVNSYGSDR 216

Query: 88  NIALILDGIAKNWTVSSNVEIT-----IEANPSSVEVNNFQGYRKAG--VNRISLGVQSL 140
               + +  A   T ++N+E       I  +P     +  +   +       + L +QS 
Sbjct: 217 --IEMGEDFAGLLTKAANIEGDFWLKYISPHPKDFTDSVIKAIAENPKVARMLHLPLQSG 274

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
             + L  + R +   E I      +   P +    D+I   P +T   ++  L       
Sbjct: 275 STKILGAMNRGYTKEEFIELALKIKKEIPDIGITTDIIVGFPGETDEDFQDTLDVVEQVG 334

Query: 199 VDHLSLYQLTIEKGTL 214
            ++  ++  +   GT 
Sbjct: 335 FENAFMFMYSKRSGTP 350


>gi|226312987|ref|YP_002772881.1| hypothetical protein BBR47_34000 [Brevibacillus brevis NBRC 100599]
 gi|226095935|dbj|BAH44377.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 448

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 62/208 (29%), Gaps = 23/208 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ--------LTGPRSISSIFFGGG 79
           C   C +C   S        +   I+S + E + +          +    +        G
Sbjct: 162 CDNACTFC---SIPLMRGGFRSRTIESIVEEARHLAAQGVVEVSLIAQDSTNYGTDIYDG 218

Query: 80  TPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
              L+ P+ +  + +     W             P          +         + + +
Sbjct: 219 K--LMLPELLNRLAEVEGIEWIRLHYAY------PGFFTDELIHTFATNPKVCKYVDMPL 270

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q  E+  L+ + R    ++  A +   R   P ++    LI   P +T   +E   +   
Sbjct: 271 QHSEDHILKRMRRPGRQTDIRALVAKIRAQVPDVALRTSLIVGFPGETEEDFERLSEFVK 330

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
               D L ++  + E  T   ++    D
Sbjct: 331 DIRFDRLGVFTYSNEDDTPASRLPDHVD 358


>gi|205356717|ref|ZP_03223478.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345455|gb|EDZ32097.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 354

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 71/193 (36%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   S   + +   E   ++ L +++ +        + +    G     L   
Sbjct: 81  CDFACSYCIIPSVRGKSRSVDE---KALLKQVEILGANGYSEIVLTGTNIGSYG--LKNG 135

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
             +  +L  + +   +      ++E  P+ ++ +  +   +A + R + + +Q   E+ L
Sbjct: 136 TTLGKLLQKMGQILGIKRIRLGSLE--PAQLDESFLEILDEAWLERHLHIALQHTSEKML 193

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R + R  +    +   +   +    +  D I A P ++   W+  L+    + + H+  +
Sbjct: 194 RIMRRRSHTDNDLKLFNAIASKGYALGTDFIVAHPGESEELWQEALRNFKEFPLTHIHAF 253

Query: 206 QLTIEKGTLFYKM 218
             +    T    M
Sbjct: 254 IFSPRNNTHSATM 266


>gi|83594376|ref|YP_428128.1| radical SAM family protein [Rhodospirillum rubrum ATCC 11170]
 gi|83577290|gb|ABC23841.1| Radical SAM [Rhodospirillum rubrum ATCC 11170]
          Length = 293

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 9/181 (4%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C     + R K  +E  I+    E++   +L        +F G G    +   ++  
Sbjct: 32  CAFCS----MYRSKTYEERPIEEVRAEIRDAARLWP--EAHRVFLGDGDALRLPTDHLLT 85

Query: 92  IL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           +L D       ++        A+    E       R A ++ + +GV++ +  +LR + +
Sbjct: 86  LLGDLAGVLPALARVSCYATPADILHKEPAELAALRAAKLSLLYMGVETGDADTLRRMVK 145

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYAVDHLSLYQLT 208
             +      AI  AR    ++S  +I  L  +       +            +LS  QL 
Sbjct: 146 GASTEAVGRAIERARAAGMKVSATVILGLAGRGRWREHAQATAALINRTPPTYLSTLQLH 205

Query: 209 I 209
           +
Sbjct: 206 L 206


>gi|28210571|ref|NP_781515.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium tetani E88]
 gi|28203009|gb|AAO35452.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium tetani E88]
          Length = 295

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 86/220 (39%), Gaps = 14/220 (6%)

Query: 28  C-VKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   KC +C     + + K  +   ++    +++  R   G   I+ IF   G    ++ 
Sbjct: 31  CSHNKCSFCS----MYKGKKFRVRELKEIFEDLEQGRLYYG--KINRIFLADGDALCLKT 84

Query: 87  QNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL 145
           +++  IL  I +       V I     +     +   +  ++ G+  I +G++S  ++ L
Sbjct: 85  ESLKKILLKIKETHPQCDRVGIYGTAKDILRKSIEELKELKELGLGIIYMGLESGSDEIL 144

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM---ELQRALSY-AVDH 201
           + + +     + I A    +    ++S  +I +L      +W+    E  +A+S    D+
Sbjct: 145 KDINKGVYLKDFIEASKKVKISGIKLSVTVISSLGG--KEKWKEHAIETGKAVSLIDPDY 202

Query: 202 LSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
           L +  L + + T   +  K G++ L      +    L   
Sbjct: 203 LGVLTLLLNEDTKMAEQVKKGEITLLKPEEVMIETKLMLE 242


>gi|58698371|ref|ZP_00373285.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535125|gb|EAL59210.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 235

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 4/117 (3%)

Query: 111 EANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF 168
             + + V+             +  + L +QS     L+ + R HN  + I   H  +++ 
Sbjct: 41  SIDVAEVDDELMDLIANESRLMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 100

Query: 169 PRM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGD 223
           P +    D+I   P +T   ++  +       + +L  +  +  K T   +M +  +
Sbjct: 101 PNIAFGADIIAGFPTETDEMFQDTVDLLKKTNIVYLHAFPYSERKNTPAARMPQVPE 157


>gi|317483763|ref|ZP_07942705.1| biotin synthase [Bilophila wadsworthia 3_1_6]
 gi|316924995|gb|EFV46139.1| biotin synthase [Bilophila wadsworthia 3_1_6]
          Length = 328

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 11/189 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF-IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C + C +C  ++H +        +   + L   + +      R    I   G  PS  + 
Sbjct: 68  CPENCAFCAQSAHHQTDSPVYPLYDTDTLLRRAEELAANNVDRF--GIVTSGTAPSDRDF 125

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             +            +   V+I + A+   +        R+AG       +++       
Sbjct: 126 DALCE------SALRIGREVKIGLCASLGLLTPERAARLREAGFTSYHHNLETSASHF-P 178

Query: 147 FLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
            +   H   + +  + +AR+   R+    I+ L  +T  Q     Q      VD L L  
Sbjct: 179 SICTTHAYEQDLETVRVARSAGFRVCSCGIFGL-GETWEQRIELSQTLTDLGVDSLPLNF 237

Query: 207 LTIEKGTLF 215
           L    GT  
Sbjct: 238 LNPIPGTPL 246


>gi|310827655|ref|YP_003960012.1| hypothetical protein ELI_2066 [Eubacterium limosum KIST612]
 gi|308739389|gb|ADO37049.1| hypothetical protein ELI_2066 [Eubacterium limosum KIST612]
          Length = 446

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 61/219 (27%), Gaps = 30/219 (13%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTE--------MQWMRQLTGPRSISSIFF 76
           C   C YC       R++      I    ++L +        +       G      I  
Sbjct: 156 CDHHCTYCVIPKIRGRHRSRSPEAIYKEAAYLEKKGVRELIIIAQDITQYGNDLEGEINL 215

Query: 77  GGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRIS 134
            G   + +        +  +                 P  +               +   
Sbjct: 216 AGLL-TRLSEDFSFRWIRLLYMY--------------PEGITEELLDVIASHDNLCHYFD 260

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQ 192
           + +Q  E++ L+ +GR  N       I L R   P       +I   P +T    E  L 
Sbjct: 261 IPIQHTEDKILKRMGRPVNKKHLFEQIGLIREKLPDAVLRTAIITGFPGETEEDHEGLLA 320

Query: 193 RALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENV 231
              +  ++ L +++ + E+GT   +     D  +     
Sbjct: 321 SLRALKINRLGVFKYSQEEGTPAAEFPDQVDEAVMERRW 359


>gi|239908955|ref|YP_002955697.1| hypothetical protein DMR_43200 [Desulfovibrio magneticus RS-1]
 gi|239798822|dbj|BAH77811.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 447

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 65/242 (26%), Gaps = 29/242 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C YC   +            + + + E + +        +             +  
Sbjct: 162 CDHACRYC---TIPSIRGPLVSKPLDALVEESRGLLDKGASELVVVAQ---------DVA 209

Query: 88  NIALILDGIAKNWTVSSNVEIT--------IEANPSSVEVNNFQGYRKAG---VNRISLG 136
                L        +   +           +   PS V  +       AG   V    + 
Sbjct: 210 AYGRDLGMKEGLKALLGKLLPLSGLKWLRLLYLYPSGVTDDLLAFLAGAGRPFVPYFDIP 269

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRA 194
            Q ++   L  +GR   A+ A   +   R  F   +     I  LP +    +E  L+  
Sbjct: 270 FQHVQPDMLAAMGRP-KAASAETVVARVRRHFSDAALRSTFIVGLPGEKKEHFETLLRFV 328

Query: 195 LSYAVDHLSLYQLTIEKGTL---FYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY 251
               ++H+ ++    E+GT         +        E V      ++  +         
Sbjct: 329 NEARLNHVGVFPYHREEGTPAAAMAGQVRSDVKARRVEAVMAAQREISADLLEDWVGRDT 388

Query: 252 EI 253
           E+
Sbjct: 389 EV 390


>gi|86150946|ref|ZP_01069162.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124495|ref|YP_004066499.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842116|gb|EAQ59362.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018217|gb|ADT66310.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 416

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 70/193 (36%), Gaps = 9/193 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISS-IFFGGGTPSLIEP 86
           C   C YC   S   + +   E   ++ L +++ +        + +    G     L   
Sbjct: 143 CDFACSYCIIPSVRGKSRSVDE---KALLKQVEILGANGYSEIVLTGTNIGSYG--LKNG 197

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNR-ISLGVQSLEEQSL 145
             +  +L  + +   +      ++E  P+ ++ +  +   +  + R + + +Q   E+ L
Sbjct: 198 TTLGKLLQKMGQISGIKRIRLGSLE--PAQIDESFLEILDETWLERHLHIALQHTSEKML 255

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
           R + R  +    +   +   +    +  D I A P ++   W+  L+    + + H+  +
Sbjct: 256 RIMRRRSHTDNDLKLFNTIASKGYALGTDFIVAHPGESEEMWQEALRNFKEFPLTHIHAF 315

Query: 206 QLTIEKGTLFYKM 218
             +    T    M
Sbjct: 316 IFSPRNNTHSATM 328


>gi|303230864|ref|ZP_07317611.1| ribosomal protein S12 methylthiotransferase RimO [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514624|gb|EFL56619.1| ribosomal protein S12 methylthiotransferase RimO [Veillonella
           atypica ACS-049-V-Sch6]
          Length = 448

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 63/222 (28%), Gaps = 27/222 (12%)

Query: 7   YENNMTGQGSNS-LGVYVHW-PFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQ 64
           Y+  M    +      YV     C   C +C     + +    +  F    +  ++   +
Sbjct: 133 YDERMPRIQTTPRYSAYVKIAEGCNNGCTFC----IIPK---VRGAFRSRSIESIKAEVE 185

Query: 65  LTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEA---------NPS 115
                 +  I       +          L+      T        +E           P+
Sbjct: 186 RLATSGVKEIVLIAQDTTSYGID-----LNNGKPLLTELLKELTKVEGIEWIRMLYLYPT 240

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF 173
                              + + +Q +    L+ + R  +  +    +   RN    ++ 
Sbjct: 241 FFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDSREDIERLLKKIRNAPTHVTL 300

Query: 174 --DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGT 213
              +I   P +T  Q++   +       D++ ++  + E+GT
Sbjct: 301 RTSIIVGFPGETDEQFQELCEFVKDIKFDNMGVFTYSQEEGT 342


>gi|317131057|ref|YP_004090371.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
 gi|315469036|gb|ADU25640.1| Radical SAM domain protein [Ethanoligenens harbinense YUAN-3]
          Length = 356

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 57/194 (29%), Gaps = 11/194 (5%)

Query: 27  FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           +C   C YC     +R       ++  +         +       + +  GG  P     
Sbjct: 64  YCKNDCYYCG----IRAGNRNARHYRLTAEEIWACAAKGYALGFRTFVLQGGEDP-WYTD 118

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLR 146
             I  I+ G+ +        +  +  +       +++ Y  AG +R  L  ++  +   R
Sbjct: 119 ARICEIVSGLKERH-----ADCAVTLSIGEKSFESYKRYYDAGADRFLLRHETANDAHYR 173

Query: 147 FLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLY 205
            L     + +     ++  R I  ++    +   P QT      +           + + 
Sbjct: 174 LLHPPELSLAHRKQCLYDLRAIGYQVGAGFMVESPGQTDETLAEDFLFLRELQPHMVGIG 233

Query: 206 QLTIEKGTLFYKMH 219
                  T +  + 
Sbjct: 234 PFVPHHDTRYAGLP 247


>gi|119872824|ref|YP_930831.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674232|gb|ABL88488.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 362

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 13/179 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           CV +CP C F     R     E +++        +        ++ +   GG   L+ P+
Sbjct: 62  CVARCPICAFY----RPPGHPEGYVKKPEEAAALVEMFVREYGVTELHINGGFNPLLTPE 117

Query: 88  NIALILDGIAKNWTV-----SSNVEITIEANPSSVE-VNNFQGYRKAGVNRIS-LGVQSL 140
               +   + +          +  E    A             +++AG++ IS  G +  
Sbjct: 118 YFDELFRAVKRRVPHVVIKGPTMAEAAYYAKLWKTSVREVLSRWKEAGLDAISGGGAEIF 177

Query: 141 EEQSLRFLGRNH-NASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYA 198
            E   + +     +  E +    +A  +    +  ++Y    + +      + R     
Sbjct: 178 AEDVRKVITPYKISGEEWVRIAEIAHELGIPSNVTMLYGHV-ERVEHVVDHIFRVRELQ 235


>gi|229824790|ref|ZP_04450859.1| hypothetical protein GCWU000182_00139 [Abiotrophia defectiva ATCC
           49176]
 gi|229791119|gb|EEP27233.1| hypothetical protein GCWU000182_00139 [Abiotrophia defectiva ATCC
           49176]
          Length = 515

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 20/225 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +     ++ ++ L     I  +  G    S    +
Sbjct: 226 CDNFCTYC-----IVPYVRGRERS-RRPGDIVKEVKCLADAGVIEIMLLGQNVNSYGKGL 279

Query: 85  E-----PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGV 137
           E     P   A +L  + K   +       +  +P        +    +      I L  
Sbjct: 280 EGEKGEPVTFANLLRMVEKVEGIKRIRF--MTPHPKDFSDELIEVIADSEKICKHIHLPF 337

Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRAL 195
           Q+     LR + R +     +      +   P ++   D+I   P +T   +E  L    
Sbjct: 338 QAGSNNVLRRMNRRYTKESYLELAGKIKTRIPDIALTTDIIVGFPGETEEDFEDTLDVVK 397

Query: 196 SYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ 240
                   +++ +   GT    M    D              + +
Sbjct: 398 EVRYQSAYMFEYSKRTGTPAATMEDQVDAEAVKRRFKRLQDTVAE 442


>gi|220917203|ref|YP_002492507.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955057|gb|ACL65441.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 334

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 16/162 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C  +C YC   +    ++            E+  + ++ G   I  +   GG P+L    
Sbjct: 32  CNFRCSYCS-PAAPETHEDPLAR------DEVARLVRIFGGLGIRRVRLTGGEPTL---- 80

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               +LD I +        E+ +  N   +        R+AGV R+++ + +L+ + L  
Sbjct: 81  -RRDVLDVIREVARAPGIEEVALTTN-GHLLQALAGPLREAGVTRLNVSLDTLDAEKLHR 138

Query: 148 L-GRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQW 187
           + GR       +A I  A    F  +  +++  +  Q   + 
Sbjct: 139 IAGRAATLERIVAGIEAAYRAGFASVKLNVVV-VRGQNDDEL 179


>gi|89898289|ref|YP_515399.1| hypothetical protein CF0482 [Chlamydophila felis Fe/C-56]
 gi|123722311|sp|Q254N4|RIMO_CHLFF RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|89331661|dbj|BAE81254.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 460

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 67/201 (33%), Gaps = 12/201 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI---SSIFFGGGTPSLI 84
           C K+C +C            +   +   + E + + ++     I     +   G   S  
Sbjct: 164 CRKRCAFC---IIPTIKGALRSKPLDQIIKEFRLLLKMGVKEIILIAQDLGDYGKDFSAD 220

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
               +  +L  + K         + +   P  V+             +  + + +Q +  
Sbjct: 221 RKSCLDKVLKEMLKEPGDYWIRMLYL--YPDEVDDTIIDLMESDHRLLPYVDIPLQHINN 278

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ + R  +  + +  +   R   P +      I   P +T  +++  +       +D
Sbjct: 279 RVLKKMLRTTSKEQILDLLTKLRTRIPHIYIRSSFIVGFPGETDDEFQDLVDFVREGWID 338

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
           +L ++  + E+G++   M   
Sbjct: 339 NLGIFSYSQEEGSVAADMPDQ 359


>gi|317060858|ref|ZP_07925343.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313686534|gb|EFS23369.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 235

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 68/198 (34%), Gaps = 7/198 (3%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C             +N  Q    +++ + +      + + +F   T +  +   +  
Sbjct: 36  CIFCSEKGSGEFTGDRHKNIYQQIEEQLELISKKFPTGRVIA-YFQNFTNTYADVDTLRK 94

Query: 92  ILDGIAKNWTVSSNVEITIEANPSSVEVN---NFQGYRKAGVNRISLGVQSLEEQSLRFL 148
             +    +  V     + I   P  +        + +++     + LG+Q++ E+   F 
Sbjct: 95  RYEEALTHPRVMG---LAIATRPDCLGEEVLHLLEEFQQKTFLWVELGLQTINEEVAEFF 151

Query: 149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLT 208
            R +  S    A    +    +    ++  LPK+           A       + ++ L 
Sbjct: 152 HRGYPLSVYTEACSRLKKYGIKFVTHILLGLPKEKEEDGLQTALYAQECGTWGIKIHCLY 211

Query: 209 IEKGTLFYKMHKDGDLVL 226
           I+K T   +++ + ++ +
Sbjct: 212 IQKNTYLEQLYLNHEIKI 229


>gi|296139507|ref|YP_003646750.1| RNA modification enzyme, MiaB family [Tsukamurella paurometabola
           DSM 20162]
 gi|296027641|gb|ADG78411.1| RNA modification enzyme, MiaB family [Tsukamurella paurometabola
           DSM 20162]
          Length = 503

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 43/116 (37%), Gaps = 4/116 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +      +      ++ + +QS  +  L+ + R++ +++ +  +   R  
Sbjct: 246 TSPHPAEFTDDVIDAMAETPNICPQLHMPLQSGSDTVLKDMRRSYRSTKFLGILDRVRER 305

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            P   ++ D+I   P +T   ++  L             +Q +I  GT    +   
Sbjct: 306 IPHAAITTDIIVGFPGETEEDFQATLDVVEKARFSSAFTFQYSIRPGTPAADLPDQ 361


>gi|195107983|ref|XP_001998572.1| GI23564 [Drosophila mojavensis]
 gi|193915166|gb|EDW14033.1| GI23564 [Drosophila mojavensis]
          Length = 588

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P        +  R       ++ L  QS     L  + R +     +  +   R I
Sbjct: 360 TSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNSAVLARMRRGYTREAYLQLVEHIRQI 419

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P +    D I     +T  ++E  +        +   L+  ++ + T  ++ 
Sbjct: 420 LPNVGLSSDFICGFCGETEAEFEDTISLIEIVQYNVAFLFAYSMREKTTAHRR 472


>gi|193216005|ref|YP_001997204.1| radical SAM domain-containing protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|193089482|gb|ACF14757.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 466

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 73/236 (30%), Gaps = 15/236 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   +     K  +   +   + E+++ +   G   +S  F         +P 
Sbjct: 204 CPVGCSFC--TTPTIYGKNFRMREVDYVIEEIKYHQNRLGKEKVSFSFMDDNI--CFKPN 259

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
               ++D +     V+ N  I++                 +G +  S+G +SL+  +++ 
Sbjct: 260 FFNELMDAMTG-MGVTWNANISMNFLERPGVPELASA---SGCDMFSIGFESLDPDTIKQ 315

Query: 148 LGRNHNA-SEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQ 206
           + +  N  +     I   +     +    ++         ++      +   ++      
Sbjct: 316 VHKGSNFHAHYEEVIKNVQKQKIAIQGYFMFGFDTDKPASFQATYDFIMQNKIEFPVFAI 375

Query: 207 LTIEKGTLFYK------MHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256
            T   GT +Y        H D +      +V       ++ +         E+ + 
Sbjct: 376 TTPFPGTPWYDEMRPRLRHTDWEKYDTYHSVYEPKILSSEELIKNFIKIQQEVYSW 431


>gi|124026430|ref|YP_001015545.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str.
           NATL1A]
 gi|229890598|sp|A2C471|MIAB_PROM1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123961498|gb|ABM76281.1| 2-methylthioadenine synthetase [Prochlorococcus marinus str.
           NATL1A]
          Length = 463

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 65/201 (32%), Gaps = 7/201 (3%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C ++C YC   S   + +      I+S + ++             +I   G        +
Sbjct: 170 CNERCTYCVVPSVRGKEQSRTPEAIKSEVEDLAKSGYKEITLLGQNIDAYGRDFQSQNKE 229

Query: 88  NIALI-LDGIAKNWTVSSNVEIT--IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEE 142
             A I L  + K       +E      ++P            +         +  QS   
Sbjct: 230 ASAQITLSYLLKYIHDIEGIERIRFATSHPRYFTKELIDTCSELPKVCEHFHIPFQSGSN 289

Query: 143 QSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSYAVD 200
           + L+ +GR +        I+  ++  P+  +S D I A P ++ T +E  L        D
Sbjct: 290 KILKNMGRGYTIESYKNIINYIKSKIPKAAISGDAIVAFPGESETDYEQTLSLIDEIKFD 349

Query: 201 HLSLYQLTIEKGTLFYKMHKD 221
           H++    +    T      + 
Sbjct: 350 HVNTAAYSPRPNTPAATWPRQ 370


>gi|116670023|ref|YP_830956.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Arthrobacter
           sp. FB24]
 gi|229890444|sp|A0JUY6|MIAB_ARTS2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|116610132|gb|ABK02856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Arthrobacter sp. FB24]
          Length = 522

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 79/230 (34%), Gaps = 17/230 (7%)

Query: 1   MKYLSAYENNMTGQGSNSLGVYVHWP-FCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEM 59
           ++ L  + + +  +  +    +V     C   C +C     V   +  +++  +     +
Sbjct: 152 LESLDVFPSTLPTKRDSVYSGWVSISVGCNNTCTFC----IVPALRGKEKD--RRPGDIL 205

Query: 60  QWMRQLTGPRSISSIFFGGGTPSL---IEPQN-IALILDGIAKNWTVSSNVEITIEANPS 115
             ++ L    +I     G    S       +   + +L    +   +          +P+
Sbjct: 206 AEIQALVDDGAIEVTLLGQNVNSYGVEFGDRQAFSKLLRACGEIQGLERVRF--TSPHPA 263

Query: 116 SVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--M 171
           +   +      +    + ++ + +QS  ++ L+ + R++ +++ +  +   R   P   +
Sbjct: 264 AFTDDVIDAMAETPNVMPQLHMPLQSGSDKVLKDMKRSYRSTKFLGILDKVRERIPHAAI 323

Query: 172 SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
           S D+I   P +T   ++  L             +Q +   GT    +   
Sbjct: 324 STDIIVGFPGETEEDFQATLDVVEKSRFATAFTFQYSKRPGTPAADLPDQ 373


>gi|292656724|ref|YP_003536621.1| MiaB-like tRNA modifying enzyme, archaeal-type [Haloferax volcanii
           DS2]
 gi|291371073|gb|ADE03300.1| MiaB-like tRNA modifying enzyme, archaeal-type [Haloferax volcanii
           DS2]
          Length = 429

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 23/199 (11%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENF--IQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85
           C+  C YC     + ++  G+ +   +   + + + +           +   G    +  
Sbjct: 133 CMSNCSYC-----ITKFATGRVDSPSVDENVEKARALVHAGA----KELRITGQDTGVYG 183

Query: 86  PQN----IALILDGIAKNWTVSSNVEITIEANPSSV---EVNNFQGYRKAG--VNRISLG 136
             N    +  +LD I         V + + ANP  V          + +     N I   
Sbjct: 184 WDNGDRKLPELLDRICTEIDGEFRVRVGM-ANPGGVHGIRDELAAVFARHDKLYNFIHAP 242

Query: 137 VQSLEEQSLRFLGRNHNASEAIAAIHL--ARNIFPRMSFDLIYALPKQTMTQWEMELQRA 194
           VQS  ++ L  + R H   +    +        +  +S D I   P +T    E  ++  
Sbjct: 243 VQSGSDEVLEHMRRQHRVDKFREIVETFDRELDYWTLSTDFIVGYPTETDADHERSMELL 302

Query: 195 LSYAVDHLSLYQLTIEKGT 213
                + +++ + +   GT
Sbjct: 303 REVRPEKVNVTRFSKRPGT 321


>gi|238018965|ref|ZP_04599391.1| hypothetical protein VEIDISOL_00825 [Veillonella dispar ATCC 17748]
 gi|237864449|gb|EEP65739.1| hypothetical protein VEIDISOL_00825 [Veillonella dispar ATCC 17748]
          Length = 453

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 4/105 (3%)

Query: 114 PSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRM 171
           P+                   + + +Q +    L+ + R  + ++    +   RN    +
Sbjct: 244 PTFFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDDRNDIERLLKKIRNAPTHI 303

Query: 172 SF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTL 214
           +    +I   P +T  Q+E           D++ ++  + E+GT 
Sbjct: 304 TLRTSIIVGFPGETDEQFEELCDFVKEIKFDNMGVFTYSQEEGTP 348


>gi|224476684|ref|YP_002634290.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421291|emb|CAL28105.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 448

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 75/233 (32%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATTLVNSGYKEIVLTGIHTGGYGQDLKDY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +          +   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLETIDGLERIRISSIEAS--QLTDEVINVISNSNKVVRHLHVPLQSGSDSVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNI--FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R ++ +     +           ++ D+I   P +T  +++      L +    L 
Sbjct: 268 KRMRRKYSMAHFSERLMKLHEALPGLAVTSDVIVGFPGETEEEFQETYDFILKHHFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPS---ENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D  + +     +      L +   S       E+
Sbjct: 328 VFPYSARTGTPAARMDDQIDESIKNERVHKLIELSNQLAKEYASHFENEVLEV 380


>gi|45357975|ref|NP_987532.1| MiaB-like tRNA modifying protein [Methanococcus maripaludis S2]
 gi|44920732|emb|CAF29968.1| Protein of unknown function UPF0004:Deoxyribonuclease/rho
           motif-related TRAM [Methanococcus maripaludis S2]
          Length = 425

 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 26/182 (14%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSI-----SSIFFG----GGTPS 82
           C YC     V+R +    ++ +  + +       +G + +      +  +G       P+
Sbjct: 156 CTYC----IVKRARGNLASYDRDLIVKKAEELVKSGTKCLLVTAQDTACYGLDNNDSLPN 211

Query: 83  LIEPQNIALILDGIAKNWTVSSN--VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSL 140
           LI   +I+ I +  A    +      E  ++    S +           V  + L +QS 
Sbjct: 212 LIN--DISEIPEKFAMRIGMMHAKFAEPILDELIESFKSEKV-------VKFLHLPIQSG 262

Query: 141 EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYA 198
           ++Q L+ + RN+   E I+ ++  ++    ++F  D+I   P +T   +E  L+      
Sbjct: 263 DDQVLKDMNRNYTVDEYISVLNEFKSKIKNLNFTTDVIVGFPTETEEAFENTLEIVKKIK 322

Query: 199 VD 200
            D
Sbjct: 323 PD 324


>gi|325299379|ref|YP_004259296.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Bacteroides salanitronis DSM 18170]
 gi|324318932|gb|ADY36823.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Bacteroides salanitronis DSM 18170]
          Length = 463

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 18/200 (9%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTG------PRSISSIFFGGGTP 81
           C   C YC            +   + S L E+  + Q          ++++S  F     
Sbjct: 172 CNNFCHYC---IVPYTRGRERSRDVASILNEVNDLCQKGYKEVTLLGQNVNSYRFEQADG 228

Query: 82  SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQS 139
           ++I      ++L  +A+          T  ++P  +     Q           I L VQS
Sbjct: 229 TVIT---FPMLLRTVAEAVPGMRVRFTT--SHPKDMSDETLQVIADVPNVCKHIHLPVQS 283

Query: 140 LEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYALPKQTMTQWEMELQRALSY 197
              + L+ + R +     +  +   R I P   +S D+      +T    +M L      
Sbjct: 284 GSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGFHSETEEDHQMSLSLMREC 343

Query: 198 AVDHLSLYQLTIEKGTLFYK 217
           A D   +++ +   GT   K
Sbjct: 344 AYDSAFMFKYSERPGTYASK 363


>gi|157364573|ref|YP_001471340.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
 gi|157315177|gb|ABV34276.1| Radical SAM domain protein [Thermotoga lettingae TMO]
          Length = 443

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 73/191 (38%), Gaps = 8/191 (4%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C   S     ++ + + +++ + E++ ++++       S+ F     ++ + +
Sbjct: 191 CPFNCEFCS-ASQFMGMRIRKRS-VENVVEELKILKKMNYG----SVIFFDDNFTIDKTR 244

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF 147
            I L    + +N   S        A+    + +  +   KAG   + +G +S E++ L+ 
Sbjct: 245 TIKLCEQMLKENLNFSWWAFSR--ADELLGKEDLVEAMSKAGCKMLFIGFESAEDEILQE 302

Query: 148 LGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL 207
             +  ++S A     L +     +    I      T    +  ++ A     + +    +
Sbjct: 303 YNKKLSSSIAFDVAKLLKKYKIDLFASFIMGALNDTKESIKKTIKFAKKLGAEIVQFSIM 362

Query: 208 TIEKGTLFYKM 218
           T   GT  Y+ 
Sbjct: 363 TPYPGTKLYEK 373


>gi|220929121|ref|YP_002506030.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
           H10]
 gi|219999449|gb|ACL76050.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
           H10]
          Length = 478

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 72/243 (29%), Gaps = 25/243 (10%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSL---I 84
           C   C YC     +  Y  G+E   +S       + +L           G    S    +
Sbjct: 196 CNNFCSYC-----IVPYVRGRERS-RSLEEIKNEVEKLAKDGCKEITLLGQNVNSYGKDL 249

Query: 85  EPQNIAL-ILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLE 141
           E       +L  + K   +       + ++P  +        R        + L VQ+  
Sbjct: 250 EGDLTFAGLLRELNKVQGIERIRF--MTSHPKDLSDELIYAMRDCEKVCEHLHLPVQAGS 307

Query: 142 EQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAV 199
            + L  + R ++  + +  I   ++  P ++   D+I   P +T   +   L        
Sbjct: 308 SKILDEMNRRYSKEQYLGLIEKVKSNIPGIALTTDIIVGFPGETEEDFNETLDVVAKARF 367

Query: 200 DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFL 259
           D    +  +   GT   K         P +            +       + EI N   L
Sbjct: 368 DMAYTFLYSKRTGTPAAK--------NPEQIPETVKKQRFDRLLELQNKISKEI-NDGLL 418

Query: 260 GAE 262
           G E
Sbjct: 419 GKE 421


>gi|120554396|ref|YP_958747.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120324245|gb|ABM18560.1| Radical SAM domain protein [Marinobacter aquaeolei VT8]
          Length = 298

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 81/241 (33%), Gaps = 18/241 (7%)

Query: 32  CPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL 91
           C +C    + +  K  +    +    +++      G   +  +F   G   ++  + +  
Sbjct: 35  CTFC--EMYTQPQKKFRARKPEDIRADIEKAAAAFGD--VRRVFLADGDAMVLPTRRLLE 90

Query: 92  IL-DGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR 150
           I+ D       +       +  N +   V      R+AG+  + +G++S +++ LR + +
Sbjct: 91  IIADLKRAFPGLERVSSYCLPRNLAKKSVEELAQLREAGLKILYVGMESGDDEVLRRVNK 150

Query: 151 NHNASEAIAAIHLARNIFPRMSFDLIYALPKQ--TMTQWEMELQRALSYAVDHLSLYQLT 208
                   +A+   R      S  ++  L  +  +                D+LS   ++
Sbjct: 151 GETWESTRSALVKIREAGLVSSVMVLNGLGGEALSRQHAINTATLCNETQPDYLSTLVVS 210

Query: 209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLN 268
             +G   ++     D  +P    A+  +   +           E+ N  F    S H  N
Sbjct: 211 FPQGEERFREGFGAD-FVPLGQQAL--FEEIRVFLE-----HLELDNTIF---RSDHASN 259

Query: 269 Y 269
           Y
Sbjct: 260 Y 260


>gi|319400912|gb|EFV89131.1| RNA modification enzyme, MiaB family protein [Staphylococcus
           epidermidis FRI909]
          Length = 448

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 75/233 (32%), Gaps = 12/233 (5%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C   C +C          + +    +  + +   +        + +    GG    ++  
Sbjct: 153 CNNFCTFC---IIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKNY 209

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
           N+A +L  +     +      +IEA+   +          +   V  + + +QS  +  L
Sbjct: 210 NLAQLLRDLDTIEGLERIRISSIEAS--QLTDEVIDVIGNSNKVVRHLHIPLQSGSDDVL 267

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           + + R +  +     +       P ++   D+I   P ++  +++      +++    L 
Sbjct: 268 KRMRRKYTMAHFSERLTKLHQALPDLAVTSDVIVGFPGESEEEFQETYDFIVNHHFSELH 327

Query: 204 LYQLTIEKGTLFYKMHKDGD---LVLPSENVAVDLYNLTQSITSAHGLHAYEI 253
           ++  +   GT   +M    D     +    +      L +   S       E+
Sbjct: 328 VFPYSPRIGTPAARMDNQIDEETKNVRVHKLISLSNQLAKEYASKFEDEVLEV 380


>gi|326200972|ref|ZP_08190844.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325988540|gb|EGD49364.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 423

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 68/218 (31%), Gaps = 16/218 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS---LI 84
           C   C YC +     R    ++   +  + EM++         I ++       +     
Sbjct: 192 CNYNCIYCTYPIIEGRTCHLRKP--EDVVNEMEFY--------IKTMGINYFLFTDSVFN 241

Query: 85  EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQS 144
           +P   +  +    K   +   V  T   +  ++   +   ++  G   + LG+ S   + 
Sbjct: 242 DPVEHSRSIAQEIKRRELP--VCWTGSVDLGNLTREDILLFKDTGCEGVDLGMDSGSNEV 299

Query: 145 LRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL 204
           L+  G++ +      A    +     + F++I   P +T                +   +
Sbjct: 300 LKRYGKSCDTKAIYKATEECKLQDMPVYFNIILGGPGETEETLNETFSLLEKTEPESTGI 359

Query: 205 -YQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQS 241
              + I   T  Y +     ++    ++    + +   
Sbjct: 360 VIGMRIYPKTPLYYLAIKEGVINIDTDLTEPHFYIAPE 397


>gi|227503441|ref|ZP_03933490.1| tRNA 2-methylthioadenosine synthase [Corynebacterium accolens ATCC
           49725]
 gi|227075944|gb|EEI13907.1| tRNA 2-methylthioadenosine synthase [Corynebacterium accolens ATCC
           49725]
          Length = 489

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 4/113 (3%)

Query: 110 IEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
              +P+    +      +      ++ + +QS  ++ L+ + R++   + +  +   R  
Sbjct: 227 TSPHPAEFTSDVIDAMAETPAVCPQLHMPLQSGSDKVLKDMRRSYRTKKFLRILDEVREK 286

Query: 168 FPR--MSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKM 218
            P   ++ D+I   P +T   ++  +             +Q +   GT   +M
Sbjct: 287 IPNAAITTDIIVGFPGETEEDFQATMDLVRRARFASAFTFQYSPRPGTPAAEM 339


>gi|116073885|ref|ZP_01471147.1| hypothetical protein RS9916_35582 [Synechococcus sp. RS9916]
 gi|116069190|gb|EAU74942.1| hypothetical protein RS9916_35582 [Synechococcus sp. RS9916]
          Length = 513

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 13/200 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPS--LIE 85
           C  +C +C     +   +  Q +     +  +         + +  +       +   ++
Sbjct: 212 CDYRCAFC----IIPHLRGDQRS---RPIESIVAEAHQLAAQGVQELILISQITTNYGLD 264

Query: 86  PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQ 143
                 + D +     V         A P+ +  +    YR+    +  + L +Q     
Sbjct: 265 LYGKPRLADLLRALGEVEIPWIRVHYAYPTGLTPDVLAAYREVPNVLPYLDLPLQHSHPD 324

Query: 144 SLRFLGRNHNASEAIAAIHLARNIFPRMSFD--LIYALPKQTMTQWEMELQRALSYAVDH 201
            LR + R   A      +   R   P       LI   P +T  Q+E           DH
Sbjct: 325 VLRAMNRPWQADVNERLLDQIREQLPDAVLRTTLIVGFPGETEEQFEHLASFIERQRFDH 384

Query: 202 LSLYQLTIEKGTLFYKMHKD 221
           + ++  + E GT    +   
Sbjct: 385 VGVFTFSPEDGTPAATLPDH 404


>gi|86158777|ref|YP_465562.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123736702|sp|Q2IKE9|MIAB_ANADE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|85775288|gb|ABC82125.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 464

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 63/197 (31%), Gaps = 26/197 (13%)

Query: 28  CVKKCPYCDFNSHV--RRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-----FFGGGT 80
           C   C +C     V   R +     F               G R ++ I      +GGG 
Sbjct: 180 CDNVCAFC----IVPHTRGREVSRPFPDVVAECAALAA--VGVREVTLIGQNVNSYGGGC 233

Query: 81  PSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQ 138
                    A +L  +A    +      T  ++P  +     + +R     +    L VQ
Sbjct: 234 T-------FADLLRRVAAVPGIDRIRFTT--SHPHDLSGALVEVFRDEPKVMPHFHLPVQ 284

Query: 139 SLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALS 196
           S  +  LR + R+++ +E +      R   P ++   D I   P +T   +E  L     
Sbjct: 285 SGSDAVLRRMRRDYSVAEYLDRFDRLRAARPGIAITTDFIVGFPGETDADFEASLALLER 344

Query: 197 YAVDHLSLYQLTIEKGT 213
              +    +  +    T
Sbjct: 345 ARFEQSFSFVFSPRPHT 361


>gi|270296340|ref|ZP_06202540.1| Fe-S oxidoreductase family 2 [Bacteroides sp. D20]
 gi|317480467|ref|ZP_07939561.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
 gi|270273744|gb|EFA19606.1| Fe-S oxidoreductase family 2 [Bacteroides sp. D20]
 gi|316903361|gb|EFV25221.1| radical SAM superfamily protein [Bacteroides sp. 4_1_36]
          Length = 564

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 17/195 (8%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSF-LTEMQWMRQLTGPRSISSIFFGGGTPSLIEP 86
           C   C +C           G+E  +++  +  ++   Q+     I ++     T +   P
Sbjct: 187 CFNTCAFC---------VSGEEKPVRTLSIESIRERLQIIHSHGIKNVRVLDRTFNY-NP 236

Query: 87  QNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQS 144
           +    +L         + ++   +E +P+ +        +K   G+  +  G+QSL E  
Sbjct: 237 RRAKELLQLF---LEFNPDICFHLEIHPALLSEELKNELKKLPKGLLHLEAGIQSLREPV 293

Query: 145 LRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLS 203
           L+   R  +  +++  +    ++       DLI  LP   +++   +++    Y    + 
Sbjct: 294 LQKSRRMGSLEDSLQGLRFLCSLPNMETHADLIAGLPLYRLSEIFEDVRTLAGYNAGEIQ 353

Query: 204 LYQLTIEKGTLFYKM 218
           L  L +  GT   + 
Sbjct: 354 LESLKLLPGTEMRRR 368


>gi|257439844|ref|ZP_05615599.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
           prausnitzii A2-165]
 gi|257197753|gb|EEU96037.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
           prausnitzii A2-165]
          Length = 460

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 4/116 (3%)

Query: 110 IEANPSSVEVNNFQGYRK--AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI 167
           + ++P                    + L VQ   ++ L+ + R++   + +  I  AR  
Sbjct: 257 MTSHPKDASHKLIDTIAAQPHLCKHLHLPVQCGSDELLKKMNRHYTIGQYMELIEYARKK 316

Query: 168 FPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221
            P ++F  D+I   P +T   ++  L+         L  +  +   GT   +M   
Sbjct: 317 VPGITFSSDIIVGFPGETEEDFQDTLELVKKVGYMQLFTFIYSKRTGTKAAEMPDP 372


>gi|167763123|ref|ZP_02435250.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC
           43183]
 gi|167699463|gb|EDS16042.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC
           43183]
          Length = 432

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 79/239 (33%), Gaps = 16/239 (6%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C +KC YC       R+       I   +  +              + + G    L + Q
Sbjct: 146 CDRKCSYCAIPIITGRHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYYGVD--LYKRQ 203

Query: 88  NIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAG--VNRISLGVQSLEEQSL 145
            +  +++ I++   V         A P+   ++ F+  R+       + + +Q + +  L
Sbjct: 204 MLPQLIEKISEIPGVEWIRLHY--AYPAHFPMDLFRVMRERPNVCKYMDIALQHISDNML 261

Query: 146 RFLGRNHNASEAIAAIHLARNIFPRMSF--DLIYALPKQTMTQWEMELQRALSYAVDHLS 203
             + R+    +    I   R   P +     L+   P +T   +E   +       D + 
Sbjct: 262 EKMRRHVTKEDTYRLIEKFREEVPGIHLRTTLMVGHPGETEADFEELKEFVRKVRFDRMG 321

Query: 204 LYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAE 262
            +  + E+GT         +  +P E            + S     + E+S  + +G +
Sbjct: 322 AFAYSEEEGTYAA---AHYEDSIPQEVKQAR----LDELMSIQQGISAELSA-AKVGRQ 372


>gi|157736477|ref|YP_001489160.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
 gi|238065288|sp|A8ERB7|RIMO_ARCB4 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|157698331|gb|ABV66491.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
          Length = 446

 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 81/236 (34%), Gaps = 18/236 (7%)

Query: 28  CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQ 87
           C + C +C   S   +         ++  + ++ ++ L     +   F    + S +   
Sbjct: 154 CNQACSFCAIPSFKGKLHS------RTLQSLVKEVKALVAKGYVDFSFVSQDSSSFLRDL 207

Query: 88  N----IALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGV--NRISLGVQSLE 141
           +    + L+++ + K   + +   + +   PS+  ++       + V  N   + +Q + 
Sbjct: 208 DIKNGLELLVEEVEKIEGIKTARILYL--YPSTTTLSLIDKIADSKVFVNYFDMPLQHIT 265

Query: 142 EQSLRFLGRNHNASEAIAAI-HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD 200
              L+ + R     +    + H+       +    I   P +T   +E       ++  D
Sbjct: 266 PSMLKIMKRGKGVEQLNELMNHMKSKPNSFVRTTFIAGHPGETEDDFEALCNYVENFKFD 325

Query: 201 HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAV---DLYNLTQSITSAHGLHAYEI 253
             +++  + E+GT         +  L  E   V    +   TQ    +     +E+
Sbjct: 326 RANVFSYSDEEGTTAETRTDKVEQELIDERAEVLGEIISQTTQESLESEVGKTFEV 381


>gi|333030505|ref|ZP_08458566.1| cobalamin B12-binding domain protein [Bacteroides coprosuis DSM
           18011]
 gi|332741102|gb|EGJ71584.1| cobalamin B12-binding domain protein [Bacteroides coprosuis DSM
           18011]
          Length = 561

 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 66/249 (26%), Gaps = 42/249 (16%)

Query: 28  CVKKCPYC---------DFNS-HVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFG 77
           C  +C YC          F   ++              +  +     L    + +   F 
Sbjct: 184 CPYQCQYCLSSLEKGVRYFPKEYIYDNLSYLIQSDAKLIKFLDRTFNLNKTHTYNVFNF- 242

Query: 78  GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKA---GVNRIS 134
                         +++          N+    E     ++                R  
Sbjct: 243 --------------LIENYR------PNLSCQFEIYADLLDDEKIAFLNNNLPKDYFRFE 282

Query: 135 LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP-RMSFDLIYALPKQTMTQWEMELQR 193
           +G+QS  E +   + R  +       I L        +  DLI  LP +T  +++     
Sbjct: 283 IGIQSTYEPTNLEVKRRQDFDLLSKNIKLLMEGGKIDLHLDLIAGLPFETYERFKKSFND 342

Query: 194 ALSYAVDHLSLYQLTIEKGTLFYK---MHKDGDLVLPSENVAVDLYNLTQSITSAHG--- 247
             +     + L  L + +GT   +    +      LP   +        + IT  H    
Sbjct: 343 VFALGAKEVQLGFLKMLRGTNLRRNAAKYGYKYDELPPYEIEYSDSISAEEITLIHNAEE 402

Query: 248 -LHAYEISN 255
            L  Y  S 
Sbjct: 403 ALDRYWNSG 411


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.314    0.149    0.439 

Lambda     K      H
   0.267   0.0454    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,240,297,980
Number of Sequences: 14124377
Number of extensions: 294608315
Number of successful extensions: 965014
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 10917
Number of HSP's successfully gapped in prelim test: 9285
Number of HSP's that attempted gapping in prelim test: 919536
Number of HSP's gapped (non-prelim): 21974
length of query: 395
length of database: 4,842,793,630
effective HSP length: 141
effective length of query: 254
effective length of database: 2,851,256,473
effective search space: 724219144142
effective search space used: 724219144142
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 83 (36.4 bits)